#transId geneId source chrom start end strand proteinId geneName transcriptName geneType transcriptType MGP_BALBcJ_T0012283.1 MGP_BALBcJ_G0010380.1 mouse_genomes_project 1 160874036 160875239 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016971.1 MGP_BALBcJ_G0015043.1 mouse_genomes_project 1 87996137 88030780 - 4933400F21Rik processed_transcript antisense MGP_BALBcJ_T0016972.1 MGP_BALBcJ_G0015043.1 mouse_genomes_project 1 88023845 88030766 - 4933400F21Rik processed_transcript antisense MGP_BALBcJ_T0016973.1 MGP_BALBcJ_G0015043.1 mouse_genomes_project 1 88027443 88030760 - 4933400F21Rik processed_transcript retained_intron MGP_BALBcJ_T0005631.1 MGP_BALBcJ_G0004741.1 mouse_genomes_project 1 15370648 15376845 + lincRNA lincRNA MGP_BALBcJ_T0021895.1 MGP_BALBcJ_G0016391.1 mouse_genomes_project 1 129824486 129871332 - MGP_BALBcJ_P0021895 Mapkapk2 protein_coding protein_coding MGP_BALBcJ_T0021896.1 MGP_BALBcJ_G0016391.1 mouse_genomes_project 1 129827657 129845352 - MGP_BALBcJ_P0021896 Mapkapk2 protein_coding protein_coding MGP_BALBcJ_T0020956.1 MGP_BALBcJ_G0016180.1 mouse_genomes_project 1 84220618 84233379 - MGP_BALBcJ_P0020956 Htr2b protein_coding protein_coding MGP_BALBcJ_T0020957.1 MGP_BALBcJ_G0016180.1 mouse_genomes_project 1 84221693 84232081 - MGP_BALBcJ_P0020957 Htr2b protein_coding protein_coding MGP_BALBcJ_T0022402.1 MGP_BALBcJ_G0016496.1 mouse_genomes_project 1 138302171 138341538 + MGP_BALBcJ_P0022402 Aspm protein_coding protein_coding MGP_BALBcJ_T0022403.1 MGP_BALBcJ_G0016496.1 mouse_genomes_project 1 138302172 138321711 + Aspm protein_coding retained_intron MGP_BALBcJ_T0022404.1 MGP_BALBcJ_G0016496.1 mouse_genomes_project 1 138302174 138341541 + MGP_BALBcJ_P0022404 Aspm protein_coding protein_coding MGP_BALBcJ_T0022405.1 MGP_BALBcJ_G0016496.1 mouse_genomes_project 1 138302218 138304534 + Aspm protein_coding retained_intron MGP_BALBcJ_T0022406.1 MGP_BALBcJ_G0016496.1 mouse_genomes_project 1 138330975 138334846 + Aspm protein_coding processed_transcript MGP_BALBcJ_T0021179.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89137076 89221040 - MGP_BALBcJ_P0021179 Col6a3 protein_coding protein_coding MGP_BALBcJ_T0021180.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89137076 89221040 - MGP_BALBcJ_P0021180 Col6a3 protein_coding protein_coding MGP_BALBcJ_T0021181.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89138051 89221021 - MGP_BALBcJ_P0021181 Col6a3 protein_coding protein_coding MGP_BALBcJ_T0021182.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89138580 89144407 - Col6a3 protein_coding retained_intron MGP_BALBcJ_T0021183.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89165591 89182090 - Col6a3 protein_coding retained_intron MGP_BALBcJ_T0021184.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89168016 89168846 - Col6a3 protein_coding retained_intron MGP_BALBcJ_T0021185.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89176587 89220997 - MGP_BALBcJ_P0021185 Col6a3 protein_coding protein_coding MGP_BALBcJ_T0021186.1 MGP_BALBcJ_G0016233.1 mouse_genomes_project 1 89198972 89221040 - MGP_BALBcJ_P0021186 Col6a3 protein_coding protein_coding MGP_BALBcJ_T0022572.1 MGP_BALBcJ_G0016529.1 mouse_genomes_project 1 151404088 151511638 + MGP_BALBcJ_P0022572 Colgalt2 protein_coding protein_coding MGP_BALBcJ_T0022573.1 MGP_BALBcJ_G0016529.1 mouse_genomes_project 1 151404088 151510761 + MGP_BALBcJ_P0022573 Colgalt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000391.1 MGP_BALBcJ_G0000332.1 mouse_genomes_project 1 18590433 18592759 - TEC TEC MGP_BALBcJ_T0000606.1 MGP_BALBcJ_G0000544.1 mouse_genomes_project 1 126838524 126841020 + TEC TEC MGP_BALBcJ_T0000551.1 MGP_BALBcJ_G0000489.1 mouse_genomes_project 1 86989226 86990987 + TEC TEC MGP_BALBcJ_T0000351.1 MGP_BALBcJ_G0000292.1 mouse_genomes_project 1 1820790 1821937 - TEC TEC MGP_BALBcJ_T0023631.1 MGP_BALBcJ_G0016769.1 mouse_genomes_project 1 173750921 173758648 + MGP_BALBcJ_P0023631 Olfr220 protein_coding protein_coding MGP_BALBcJ_T0023632.1 MGP_BALBcJ_G0016769.1 mouse_genomes_project 1 173757670 173758648 + MGP_BALBcJ_P0023632 Olfr220 protein_coding protein_coding MGP_BALBcJ_T0000590.1 MGP_BALBcJ_G0000528.1 mouse_genomes_project 1 122049584 122052592 - TEC TEC MGP_BALBcJ_T0099040.1 MGP_BALBcJ_G0037080.1 mouse_genomes_project 1 188764933 188765590 - 2900042K21Rik sense_overlapping sense_overlapping MGP_BALBcJ_T0000438.1 MGP_BALBcJ_G0000376.1 mouse_genomes_project 1 33760941 33763100 + TEC TEC MGP_BALBcJ_T0020203.1 MGP_BALBcJ_G0016040.1 mouse_genomes_project 1 63053706 63055196 - MGP_BALBcJ_P0020203 protein_coding protein_coding MGP_BALBcJ_T0020204.1 MGP_BALBcJ_G0016040.1 mouse_genomes_project 1 63054565 63055196 - protein_coding retained_intron MGP_BALBcJ_T0000612.1 MGP_BALBcJ_G0000550.1 mouse_genomes_project 1 128547354 128551195 + TEC TEC MGP_BALBcJ_T0000448.1 MGP_BALBcJ_G0000386.1 mouse_genomes_project 1 36737071 36737956 - TEC TEC MGP_BALBcJ_T0019940.1 MGP_BALBcJ_G0015993.1 mouse_genomes_project 1 56448472 56459183 + MGP_BALBcJ_P0019940 Ndufb3 protein_coding protein_coding MGP_BALBcJ_T0011894.1 MGP_BALBcJ_G0009991.1 mouse_genomes_project 1 16387142 16387614 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019737.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50774942 50877291 - MGP_BALBcJ_P0019737 Pms1 protein_coding protein_coding MGP_BALBcJ_T0019738.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50782867 50877290 - MGP_BALBcJ_P0019738 Pms1 protein_coding protein_coding MGP_BALBcJ_T0019739.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50846639 50877240 - Pms1 protein_coding processed_transcript MGP_BALBcJ_T0019740.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50851720 50877248 - MGP_BALBcJ_P0019740 Pms1 protein_coding protein_coding MGP_BALBcJ_T0019741.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50859804 50866822 - MGP_BALBcJ_P0019741 Pms1 protein_coding protein_coding MGP_BALBcJ_T0019742.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50859826 50877288 - MGP_BALBcJ_P0019742 Pms1 protein_coding protein_coding MGP_BALBcJ_T0019743.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50866360 50877288 - MGP_BALBcJ_P0019743 Pms1 protein_coding protein_coding MGP_BALBcJ_T0019744.1 MGP_BALBcJ_G0015955.1 mouse_genomes_project 1 50875570 50877288 - Pms1 protein_coding retained_intron MGP_BALBcJ_T0006023.1 MGP_BALBcJ_G0005044.1 mouse_genomes_project 1 189972861 189986935 + Gm29678 lincRNA lincRNA MGP_BALBcJ_T0002964.1 MGP_BALBcJ_G0002783.1 mouse_genomes_project 1 188905960 188907426 + A430027H14Rik antisense antisense MGP_BALBcJ_T0002965.1 MGP_BALBcJ_G0002783.1 mouse_genomes_project 1 188906513 188907402 + A430027H14Rik antisense antisense MGP_BALBcJ_T0000528.1 MGP_BALBcJ_G0000466.1 mouse_genomes_project 1 80145577 80147381 + TEC TEC MGP_BALBcJ_T0002819.1 MGP_BALBcJ_G0002667.1 mouse_genomes_project 1 73352972 73360258 - Gm15179 antisense antisense MGP_BALBcJ_T0002820.1 MGP_BALBcJ_G0002667.1 mouse_genomes_project 1 73353032 73355215 - Gm15179 antisense antisense MGP_BALBcJ_T0020736.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75390458 75541518 - MGP_BALBcJ_P0020736 Epha4 protein_coding protein_coding MGP_BALBcJ_T0020737.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75390462 75541509 - MGP_BALBcJ_P0020737 Epha4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020738.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75396396 75541518 - MGP_BALBcJ_P0020738 Epha4 protein_coding protein_coding MGP_BALBcJ_T0020739.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75396875 75400876 - MGP_BALBcJ_P0020739 Epha4 protein_coding protein_coding MGP_BALBcJ_T0020740.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75396893 75541509 - MGP_BALBcJ_P0020740 Epha4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020741.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75422580 75541515 - Epha4 protein_coding retained_intron MGP_BALBcJ_T0020742.1 MGP_BALBcJ_G0016133.1 mouse_genomes_project 1 75432057 75541513 - MGP_BALBcJ_P0020742 Epha4 protein_coding protein_coding MGP_BALBcJ_T0005676.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 39963146 40066706 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005677.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019867 40064994 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005678.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019873 40038910 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005679.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019874 40065019 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005680.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019874 40066723 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005681.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019874 40066723 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005682.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019874 40023345 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005683.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019875 40064959 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005684.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40019875 40039591 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005685.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40020052 40038831 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005686.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40038770 40066740 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0005687.1 MGP_BALBcJ_G0004779.1 mouse_genomes_project 1 40064892 40066723 - Pantr1 lincRNA lincRNA MGP_BALBcJ_T0002771.1 MGP_BALBcJ_G0002633.1 mouse_genomes_project 1 37419263 37429340 - Gm16894 antisense antisense MGP_BALBcJ_T0002853.1 MGP_BALBcJ_G0002694.1 mouse_genomes_project 1 118155436 118161716 - Gm27184 antisense antisense MGP_BALBcJ_T0021687.1 MGP_BALBcJ_G0016343.1 mouse_genomes_project 1 118561012 118633923 - MGP_BALBcJ_P0021687 Cfap221 protein_coding protein_coding MGP_BALBcJ_T0021688.1 MGP_BALBcJ_G0016343.1 mouse_genomes_project 1 118561190 118631944 - MGP_BALBcJ_P0021688 Cfap221 protein_coding protein_coding MGP_BALBcJ_T0021689.1 MGP_BALBcJ_G0016343.1 mouse_genomes_project 1 118598120 118633967 - MGP_BALBcJ_P0021689 Cfap221 protein_coding protein_coding MGP_BALBcJ_T0000527.1 MGP_BALBcJ_G0000465.1 mouse_genomes_project 1 79554974 79556978 - TEC TEC MGP_BALBcJ_T0000726.1 MGP_BALBcJ_G0000662.1 mouse_genomes_project 1 164856440 164857439 - TEC TEC MGP_BALBcJ_T0099160.1 MGP_BALBcJ_G0037196.1 mouse_genomes_project 1 191363563 191363677 - Gm26203 snRNA snRNA MGP_BALBcJ_T0000482.1 MGP_BALBcJ_G0000420.1 mouse_genomes_project 1 58955085 58957575 + TEC TEC MGP_BALBcJ_T0005688.1 MGP_BALBcJ_G0004780.1 mouse_genomes_project 1 40124195 40126365 + Dalir lincRNA lincRNA MGP_BALBcJ_T0019012.1 MGP_BALBcJ_G0015814.1 mouse_genomes_project 1 18349693 18374744 + MGP_BALBcJ_P0019012 Gsta3 protein_coding protein_coding MGP_BALBcJ_T0019013.1 MGP_BALBcJ_G0015814.1 mouse_genomes_project 1 18349711 18374104 + MGP_BALBcJ_P0019013 Gsta3 protein_coding protein_coding MGP_BALBcJ_T0019014.1 MGP_BALBcJ_G0015814.1 mouse_genomes_project 1 18349733 18373929 + MGP_BALBcJ_P0019014 Gsta3 protein_coding protein_coding MGP_BALBcJ_T0019015.1 MGP_BALBcJ_G0015814.1 mouse_genomes_project 1 18362601 18365393 + Gsta3 protein_coding retained_intron MGP_BALBcJ_T0005887.1 MGP_BALBcJ_G0004940.1 mouse_genomes_project 1 135383114 135397311 + Gm37799 lincRNA lincRNA MGP_BALBcJ_T0021884.1 MGP_BALBcJ_G0016387.1 mouse_genomes_project 1 129648048 129651971 - MGP_BALBcJ_P0021884 Il24 protein_coding protein_coding MGP_BALBcJ_T0021885.1 MGP_BALBcJ_G0016387.1 mouse_genomes_project 1 129648048 129653429 - MGP_BALBcJ_P0021885 Il24 protein_coding protein_coding MGP_BALBcJ_T0021886.1 MGP_BALBcJ_G0016387.1 mouse_genomes_project 1 129648429 129653314 - MGP_BALBcJ_P0021886 Il24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021887.1 MGP_BALBcJ_G0016387.1 mouse_genomes_project 1 129650761 129653388 - MGP_BALBcJ_P0021887 Il24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000622.1 MGP_BALBcJ_G0000560.1 mouse_genomes_project 1 130866960 130872919 + TEC TEC MGP_BALBcJ_T0021237.1 MGP_BALBcJ_G0016242.1 mouse_genomes_project 1 89702562 89728743 + MGP_BALBcJ_P0021237 Espnl protein_coding protein_coding MGP_BALBcJ_T0021238.1 MGP_BALBcJ_G0016242.1 mouse_genomes_project 1 89702620 89726376 + MGP_BALBcJ_P0021238 Espnl protein_coding protein_coding MGP_BALBcJ_T0021365.1 MGP_BALBcJ_G0016273.1 mouse_genomes_project 1 91562768 91626966 + MGP_BALBcJ_P0021365 Crocc2 protein_coding protein_coding MGP_BALBcJ_T0021366.1 MGP_BALBcJ_G0016273.1 mouse_genomes_project 1 91574767 91624751 + MGP_BALBcJ_P0021366 Crocc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0019105.1 MGP_BALBcJ_G0015835.1 mouse_genomes_project 1 28430860 28461655 + MGP_BALBcJ_P0019105 Lgsn protein_coding protein_coding MGP_BALBcJ_T0019106.1 MGP_BALBcJ_G0015835.1 mouse_genomes_project 1 28445173 28461655 + MGP_BALBcJ_P0019106 Lgsn protein_coding protein_coding MGP_BALBcJ_T0021552.1 MGP_BALBcJ_G0016311.1 mouse_genomes_project 1 104993873 105175271 - MGP_BALBcJ_P0021552 Bcl2 protein_coding protein_coding MGP_BALBcJ_T0021553.1 MGP_BALBcJ_G0016311.1 mouse_genomes_project 1 105171351 105174176 - MGP_BALBcJ_P0021553 Bcl2 protein_coding protein_coding MGP_BALBcJ_T0005900.1 MGP_BALBcJ_G0004949.1 mouse_genomes_project 1 137035096 137037153 - Gm28556 lincRNA lincRNA MGP_BALBcJ_T0102104.1 MGP_BALBcJ_G0039921.1 mouse_genomes_project 1 176155494 176155654 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0021910.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130031183 130041947 - Ikbke protein_coding retained_intron MGP_BALBcJ_T0021911.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130031437 130056456 - MGP_BALBcJ_P0021911 Ikbke protein_coding protein_coding MGP_BALBcJ_T0021912.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130031442 130053798 - MGP_BALBcJ_P0021912 Ikbke protein_coding protein_coding MGP_BALBcJ_T0021913.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130035860 130043122 - Ikbke protein_coding retained_intron MGP_BALBcJ_T0021914.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130040176 130047376 - Ikbke protein_coding retained_intron MGP_BALBcJ_T0021915.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130047732 130049374 - Ikbke protein_coding retained_intron MGP_BALBcJ_T0021916.1 MGP_BALBcJ_G0016395.1 mouse_genomes_project 1 130050623 130053560 - MGP_BALBcJ_P0021916 Ikbke protein_coding protein_coding MGP_BALBcJ_T0099070.1 MGP_BALBcJ_G0037106.1 mouse_genomes_project 1 7626181 7626288 - Gm25253 snRNA snRNA MGP_BALBcJ_T0018960.1 MGP_BALBcJ_G0015796.1 mouse_genomes_project 1 13756608 13779615 + MGP_BALBcJ_P0018960 Ly96 protein_coding unknown_likely_coding MGP_BALBcJ_T0018961.1 MGP_BALBcJ_G0015796.1 mouse_genomes_project 1 13756861 13761118 + Ly96 protein_coding retained_intron MGP_BALBcJ_T0018962.1 MGP_BALBcJ_G0015796.1 mouse_genomes_project 1 13757320 13779615 + MGP_BALBcJ_P0018962 Ly96 protein_coding protein_coding MGP_BALBcJ_T0000369.1 MGP_BALBcJ_G0000310.1 mouse_genomes_project 1 8477592 8480063 + TEC TEC MGP_BALBcJ_T0000764.1 MGP_BALBcJ_G0000699.1 mouse_genomes_project 1 181523828 181526053 - TEC TEC MGP_BALBcJ_T0011848.1 MGP_BALBcJ_G0009945.1 mouse_genomes_project 1 4075308 4076611 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012206.1 MGP_BALBcJ_G0010303.1 mouse_genomes_project 1 127211307 127211907 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009513.1 MGP_BALBcJ_G0007638.1 mouse_genomes_project 1 149001005 149001481 - miRNA miRNA MGP_BALBcJ_T0022561.1 MGP_BALBcJ_G0016527.1 mouse_genomes_project 1 150856846 151093634 - MGP_BALBcJ_P0022561 1700025G04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022562.1 MGP_BALBcJ_G0016527.1 mouse_genomes_project 1 150883585 151093789 - MGP_BALBcJ_P0022562 1700025G04Rik protein_coding protein_coding MGP_BALBcJ_T0022563.1 MGP_BALBcJ_G0016527.1 mouse_genomes_project 1 150892110 150920497 - 1700025G04Rik protein_coding retained_intron MGP_BALBcJ_T0022564.1 MGP_BALBcJ_G0016527.1 mouse_genomes_project 1 150892444 151057232 - MGP_BALBcJ_P0022564 1700025G04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000439.1 MGP_BALBcJ_G0000377.1 mouse_genomes_project 1 34164289 34164432 - TEC TEC MGP_BALBcJ_T0022488.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149287049 149322589 - MGP_BALBcJ_P0022488 BC003331 protein_coding protein_coding MGP_BALBcJ_T0022489.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149287296 149322564 - MGP_BALBcJ_P0022489 BC003331 protein_coding protein_coding MGP_BALBcJ_T0022490.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149287296 149322271 - MGP_BALBcJ_P0022490 BC003331 protein_coding protein_coding MGP_BALBcJ_T0022491.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149288265 149322228 - MGP_BALBcJ_P0022491 BC003331 protein_coding protein_coding MGP_BALBcJ_T0022492.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149288275 149322252 - MGP_BALBcJ_P0022492 BC003331 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022493.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149304342 149311983 - BC003331 protein_coding retained_intron MGP_BALBcJ_T0022494.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149305070 149322446 - BC003331 protein_coding processed_transcript MGP_BALBcJ_T0022495.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149313790 149322257 - BC003331 protein_coding retained_intron MGP_BALBcJ_T0022496.1 MGP_BALBcJ_G0016517.1 mouse_genomes_project 1 149317519 149322256 - BC003331 protein_coding retained_intron MGP_BALBcJ_T0024092.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188762510 188905608 - MGP_BALBcJ_P0024092 Kcnk2 protein_coding protein_coding MGP_BALBcJ_T0024093.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188762515 188906722 - MGP_BALBcJ_P0024093 Kcnk2 protein_coding protein_coding MGP_BALBcJ_T0024094.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188762522 188959723 - MGP_BALBcJ_P0024094 Kcnk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024095.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188764338 188959663 - MGP_BALBcJ_P0024095 Kcnk2 protein_coding protein_coding MGP_BALBcJ_T0024096.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188764610 188769794 - Kcnk2 protein_coding processed_transcript MGP_BALBcJ_T0024097.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188764647 188797623 - Kcnk2 protein_coding processed_transcript MGP_BALBcJ_T0024098.1 MGP_BALBcJ_G0016864.1 mouse_genomes_project 1 188900276 188909509 - Kcnk2 protein_coding processed_transcript MGP_BALBcJ_T0005722.1 MGP_BALBcJ_G0004807.1 mouse_genomes_project 1 59229875 59236094 - Gm28083 lincRNA lincRNA MGP_BALBcJ_T0100325.1 MGP_BALBcJ_G0038361.1 mouse_genomes_project 1 17943671 17943803 - Gm24723 snoRNA snoRNA MGP_BALBcJ_T0020904.1 MGP_BALBcJ_G0016168.1 mouse_genomes_project 1 83002893 83032934 - MGP_BALBcJ_P0020904 Slc16a14 protein_coding protein_coding MGP_BALBcJ_T0020905.1 MGP_BALBcJ_G0016168.1 mouse_genomes_project 1 83026311 83032657 - MGP_BALBcJ_P0020905 Slc16a14 protein_coding protein_coding MGP_BALBcJ_T0005920.1 MGP_BALBcJ_G0004966.1 mouse_genomes_project 1 153045925 153126761 - A830008E24Rik lincRNA lincRNA MGP_BALBcJ_T0005921.1 MGP_BALBcJ_G0004966.1 mouse_genomes_project 1 153056421 153128559 - A830008E24Rik lincRNA lincRNA MGP_BALBcJ_T0011230.1 MGP_BALBcJ_G0009355.1 mouse_genomes_project 1 88031673 88031984 + Gm26037 misc_RNA misc_RNA MGP_BALBcJ_T0005881.1 MGP_BALBcJ_G0004934.1 mouse_genomes_project 1 132760037 132770189 + Gm1627 lincRNA lincRNA MGP_BALBcJ_T0005617.1 MGP_BALBcJ_G0004731.1 mouse_genomes_project 1 1623468 1626592 - Gm37323 lincRNA lincRNA MGP_BALBcJ_T0020816.1 MGP_BALBcJ_G0016151.1 mouse_genomes_project 1 80268787 80327372 - MGP_BALBcJ_P0020816 Irs1 protein_coding protein_coding MGP_BALBcJ_T0012064.1 MGP_BALBcJ_G0010161.1 mouse_genomes_project 1 64032256 64032668 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012044.1 MGP_BALBcJ_G0010141.1 mouse_genomes_project 1 59513156 59513546 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011882.1 MGP_BALBcJ_G0009979.1 mouse_genomes_project 1 13726078 13726761 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000360.1 MGP_BALBcJ_G0000301.1 mouse_genomes_project 1 5668927 5670088 - TEC TEC MGP_BALBcJ_T0002789.1 MGP_BALBcJ_G0002648.1 mouse_genomes_project 1 56952644 56992690 + Gm29018 antisense antisense MGP_BALBcJ_T0002790.1 MGP_BALBcJ_G0002648.1 mouse_genomes_project 1 56969227 56971079 + Gm29018 antisense antisense MGP_BALBcJ_T0098800.1 MGP_BALBcJ_G0036853.1 mouse_genomes_project 1 137819615 137821206 + 4930596I21Rik sense_intronic sense_intronic MGP_BALBcJ_T0012339.1 MGP_BALBcJ_G0010436.1 mouse_genomes_project 1 189234161 189234302 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009499.1 MGP_BALBcJ_G0007624.1 mouse_genomes_project 1 99286924 99287033 + Gm25537 miRNA miRNA MGP_BALBcJ_T0022324.1 MGP_BALBcJ_G0016481.1 mouse_genomes_project 1 135050855 135072156 - MGP_BALBcJ_P0022324 5730559C18Rik protein_coding protein_coding MGP_BALBcJ_T0022325.1 MGP_BALBcJ_G0016481.1 mouse_genomes_project 1 135057598 135067610 - MGP_BALBcJ_P0022325 5730559C18Rik protein_coding protein_coding MGP_BALBcJ_T0022326.1 MGP_BALBcJ_G0016481.1 mouse_genomes_project 1 135057636 135067631 - MGP_BALBcJ_P0022326 5730559C18Rik protein_coding protein_coding MGP_BALBcJ_T0022327.1 MGP_BALBcJ_G0016481.1 mouse_genomes_project 1 135060883 135064983 - 5730559C18Rik protein_coding retained_intron MGP_BALBcJ_T0022328.1 MGP_BALBcJ_G0016481.1 mouse_genomes_project 1 135063513 135072011 - MGP_BALBcJ_P0022328 5730559C18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022329.1 MGP_BALBcJ_G0016481.1 mouse_genomes_project 1 135063534 135067340 - MGP_BALBcJ_P0022329 5730559C18Rik protein_coding protein_coding MGP_BALBcJ_T0102084.1 MGP_BALBcJ_G0039901.1 mouse_genomes_project 1 129436603 129450046 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005873.1 MGP_BALBcJ_G0004926.1 mouse_genomes_project 1 129195147 129203382 - Gm15675 lincRNA lincRNA MGP_BALBcJ_T0005848.1 MGP_BALBcJ_G0004908.1 mouse_genomes_project 1 117963278 117972610 + Gm29455 lincRNA lincRNA MGP_BALBcJ_T0005849.1 MGP_BALBcJ_G0004908.1 mouse_genomes_project 1 117963320 118019728 + Gm29455 lincRNA lincRNA MGP_BALBcJ_T0018970.1 MGP_BALBcJ_G0015800.1 mouse_genomes_project 1 14773040 14818411 + MGP_BALBcJ_P0018970 Crispld1 protein_coding protein_coding MGP_BALBcJ_T0018971.1 MGP_BALBcJ_G0015800.1 mouse_genomes_project 1 14773054 14798726 + MGP_BALBcJ_P0018971 Crispld1 protein_coding protein_coding MGP_BALBcJ_T0018972.1 MGP_BALBcJ_G0015800.1 mouse_genomes_project 1 14773083 14819180 + MGP_BALBcJ_P0018972 Crispld1 protein_coding protein_coding MGP_BALBcJ_T0102101.1 MGP_BALBcJ_G0039918.1 mouse_genomes_project 1 173409364 173410307 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005752.1 MGP_BALBcJ_G0004830.1 mouse_genomes_project 1 70134264 70148622 - Gm4319 lincRNA lincRNA MGP_BALBcJ_T0023079.1 MGP_BALBcJ_G0016624.1 mouse_genomes_project 1 163285015 163297270 + MGP_BALBcJ_P0023079 Ccdc181 protein_coding protein_coding MGP_BALBcJ_T0000725.1 MGP_BALBcJ_G0000661.1 mouse_genomes_project 1 164855069 164855631 - TEC TEC MGP_BALBcJ_T0011880.1 MGP_BALBcJ_G0009977.1 mouse_genomes_project 1 12808704 12808804 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020935.1 MGP_BALBcJ_G0016176.1 mouse_genomes_project 1 84058582 84081596 - MGP_BALBcJ_P0020935 Gpr55 protein_coding protein_coding MGP_BALBcJ_T0005793.1 MGP_BALBcJ_G0004860.1 mouse_genomes_project 1 86777725 86796577 - Gm29538 lincRNA lincRNA MGP_BALBcJ_T0012265.1 MGP_BALBcJ_G0010362.1 mouse_genomes_project 1 152619121 152620754 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005943.1 MGP_BALBcJ_G0004982.1 mouse_genomes_project 1 163159633 163163319 - Gm16548 lincRNA lincRNA MGP_BALBcJ_T0000597.1 MGP_BALBcJ_G0000535.1 mouse_genomes_project 1 123555836 123558868 - TEC TEC MGP_BALBcJ_T0023608.1 MGP_BALBcJ_G0016752.1 mouse_genomes_project 1 172975366 173284825 - protein_coding retained_intron MGP_BALBcJ_T0023615.1 MGP_BALBcJ_G0016752.1 mouse_genomes_project 1 173265289 173284770 - MGP_BALBcJ_P0023615 protein_coding protein_coding MGP_BALBcJ_T0002918.1 MGP_BALBcJ_G0002744.1 mouse_genomes_project 1 163154359 163157280 - Gm16587 antisense antisense MGP_BALBcJ_T0100366.1 MGP_BALBcJ_G0038402.1 mouse_genomes_project 1 100845823 100845922 - Gm23036 snoRNA snoRNA MGP_BALBcJ_T0000505.1 MGP_BALBcJ_G0000443.1 mouse_genomes_project 1 67768183 67770069 + TEC TEC MGP_BALBcJ_T0024285.1 MGP_BALBcJ_G0016900.1 mouse_genomes_project 1 192818677 192819735 - MGP_BALBcJ_P0024285 G0s2 protein_coding protein_coding MGP_BALBcJ_T0021567.1 MGP_BALBcJ_G0016315.1 mouse_genomes_project 1 105385206 105407760 + MGP_BALBcJ_P0021567 Serpinb12 protein_coding protein_coding MGP_BALBcJ_T0021568.1 MGP_BALBcJ_G0016315.1 mouse_genomes_project 1 105389633 105407760 + MGP_BALBcJ_P0021568 Serpinb12 protein_coding protein_coding MGP_BALBcJ_T0021569.1 MGP_BALBcJ_G0016315.1 mouse_genomes_project 1 105389635 105401138 + Serpinb12 protein_coding retained_intron MGP_BALBcJ_T0022668.1 MGP_BALBcJ_G0016552.1 mouse_genomes_project 1 154119863 154139608 - MGP_BALBcJ_P0022668 Mr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022669.1 MGP_BALBcJ_G0016552.1 mouse_genomes_project 1 154120460 154126601 - Mr1 protein_coding retained_intron MGP_BALBcJ_T0022670.1 MGP_BALBcJ_G0016552.1 mouse_genomes_project 1 154120464 154139587 - MGP_BALBcJ_P0022670 Mr1 protein_coding protein_coding MGP_BALBcJ_T0022671.1 MGP_BALBcJ_G0016552.1 mouse_genomes_project 1 154121417 154139608 - MGP_BALBcJ_P0022671 Mr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022672.1 MGP_BALBcJ_G0016552.1 mouse_genomes_project 1 154128366 154139618 - Mr1 protein_coding retained_intron MGP_BALBcJ_T0024157.1 MGP_BALBcJ_G0016875.1 mouse_genomes_project 1 190640298 190652497 + MGP_BALBcJ_P0024157 Nsl1 protein_coding protein_coding MGP_BALBcJ_T0024158.1 MGP_BALBcJ_G0016875.1 mouse_genomes_project 1 190640310 190654230 + MGP_BALBcJ_P0024158 Nsl1 protein_coding protein_coding MGP_BALBcJ_T0024159.1 MGP_BALBcJ_G0016875.1 mouse_genomes_project 1 190640317 190663750 + MGP_BALBcJ_P0024159 Nsl1 protein_coding protein_coding MGP_BALBcJ_T0021801.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126659810 126809376 - MGP_BALBcJ_P0021801 Zranb3 protein_coding protein_coding MGP_BALBcJ_T0021802.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126660296 126809915 - MGP_BALBcJ_P0021802 Zranb3 protein_coding protein_coding MGP_BALBcJ_T0021803.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126670761 126678518 - Zranb3 protein_coding processed_transcript MGP_BALBcJ_T0021804.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126692825 126809961 - Zranb3 protein_coding processed_transcript MGP_BALBcJ_T0021805.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126702144 126809377 - Zranb3 protein_coding retained_intron MGP_BALBcJ_T0021806.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126702532 126724348 - Zranb3 protein_coding processed_transcript MGP_BALBcJ_T0021807.1 MGP_BALBcJ_G0016368.1 mouse_genomes_project 1 126765649 126809368 - Zranb3 protein_coding retained_intron MGP_BALBcJ_T0005653.1 MGP_BALBcJ_G0004761.1 mouse_genomes_project 1 33080244 33084563 + Gm28415 lincRNA lincRNA MGP_BALBcJ_T0023756.1 MGP_BALBcJ_G0016797.1 mouse_genomes_project 1 179053309 179140881 + MGP_BALBcJ_P0023756 Cnst protein_coding protein_coding MGP_BALBcJ_T0023757.1 MGP_BALBcJ_G0016797.1 mouse_genomes_project 1 179053438 179090245 + Cnst protein_coding retained_intron MGP_BALBcJ_T0023758.1 MGP_BALBcJ_G0016797.1 mouse_genomes_project 1 179053448 179109638 + Cnst protein_coding retained_intron MGP_BALBcJ_T0023759.1 MGP_BALBcJ_G0016797.1 mouse_genomes_project 1 179100698 179111782 + Cnst protein_coding processed_transcript MGP_BALBcJ_T0006012.1 MGP_BALBcJ_G0005035.1 mouse_genomes_project 1 184876815 184882350 - 4930532G15Rik lincRNA lincRNA MGP_BALBcJ_T0102078.1 MGP_BALBcJ_G0039895.1 mouse_genomes_project 1 103704181 103705019 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0024077.1 MGP_BALBcJ_G0016862.1 mouse_genomes_project 1 187820829 187906519 + Ush2a protein_coding retained_intron MGP_BALBcJ_T0024078.1 MGP_BALBcJ_G0016862.1 mouse_genomes_project 1 187820841 188001289 + Ush2a protein_coding retained_intron MGP_BALBcJ_T0024079.1 MGP_BALBcJ_G0016862.1 mouse_genomes_project 1 187821840 188508622 + MGP_BALBcJ_P0024079 Ush2a protein_coding protein_coding MGP_BALBcJ_T0024080.1 MGP_BALBcJ_G0016862.1 mouse_genomes_project 1 188088320 188221276 + Ush2a protein_coding retained_intron MGP_BALBcJ_T0024081.1 MGP_BALBcJ_G0016862.1 mouse_genomes_project 1 188497001 188508546 + MGP_BALBcJ_P0024081 Ush2a protein_coding protein_coding MGP_BALBcJ_T0023179.1 MGP_BALBcJ_G0016642.1 mouse_genomes_project 1 165103804 165133421 - MGP_BALBcJ_P0023179 Dusp27 protein_coding protein_coding MGP_BALBcJ_T0023180.1 MGP_BALBcJ_G0016642.1 mouse_genomes_project 1 165103809 165133395 - MGP_BALBcJ_P0023180 Dusp27 protein_coding protein_coding MGP_BALBcJ_T0012203.1 MGP_BALBcJ_G0010300.1 mouse_genomes_project 1 124381250 124381879 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005859.1 MGP_BALBcJ_G0004916.1 mouse_genomes_project 1 119505424 119506761 + Gm29347 lincRNA lincRNA MGP_BALBcJ_T0019220.1 MGP_BALBcJ_G0015857.1 mouse_genomes_project 1 33546809 33555649 - MGP_BALBcJ_P0019220 Neurl3 protein_coding protein_coding MGP_BALBcJ_T0019221.1 MGP_BALBcJ_G0015857.1 mouse_genomes_project 1 33551073 33556662 - MGP_BALBcJ_P0019221 Neurl3 protein_coding protein_coding MGP_BALBcJ_T0023349.1 MGP_BALBcJ_G0016688.1 mouse_genomes_project 1 170288995 170290320 + MGP_BALBcJ_P0023349 Apoa2 protein_coding protein_coding MGP_BALBcJ_T0023350.1 MGP_BALBcJ_G0016688.1 mouse_genomes_project 1 170289023 170290319 + MGP_BALBcJ_P0023350 Apoa2 protein_coding protein_coding MGP_BALBcJ_T0023351.1 MGP_BALBcJ_G0016688.1 mouse_genomes_project 1 170289025 170290314 + MGP_BALBcJ_P0023351 Apoa2 protein_coding protein_coding MGP_BALBcJ_T0023352.1 MGP_BALBcJ_G0016688.1 mouse_genomes_project 1 170289032 170290278 + MGP_BALBcJ_P0023352 Apoa2 protein_coding protein_coding MGP_BALBcJ_T0000614.1 MGP_BALBcJ_G0000552.1 mouse_genomes_project 1 128659582 128662454 + TEC TEC MGP_BALBcJ_T0012284.1 MGP_BALBcJ_G0010381.1 mouse_genomes_project 1 161349890 161350320 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012308.1 MGP_BALBcJ_G0010405.1 mouse_genomes_project 1 170796227 170796755 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012210.1 MGP_BALBcJ_G0010307.1 mouse_genomes_project 1 128921672 128922081 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012034.1 MGP_BALBcJ_G0010131.1 mouse_genomes_project 1 58228500 58228727 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002748.1 MGP_BALBcJ_G0002614.1 mouse_genomes_project 1 17434543 17469077 + 4930486I03Rik antisense antisense MGP_BALBcJ_T0019758.1 MGP_BALBcJ_G0015960.1 mouse_genomes_project 1 51596338 51634999 - MGP_BALBcJ_P0019758 Stk17b protein_coding protein_coding MGP_BALBcJ_T0019759.1 MGP_BALBcJ_G0015960.1 mouse_genomes_project 1 51608803 51610924 - Stk17b protein_coding retained_intron MGP_BALBcJ_T0019760.1 MGP_BALBcJ_G0015960.1 mouse_genomes_project 1 51609379 51634932 - MGP_BALBcJ_P0019760 Stk17b protein_coding protein_coding MGP_BALBcJ_T0023616.1 MGP_BALBcJ_G0016757.1 mouse_genomes_project 1 173293830 173296229 + MGP_BALBcJ_P0023616 Olfr433 protein_coding protein_coding MGP_BALBcJ_T0000468.1 MGP_BALBcJ_G0000406.1 mouse_genomes_project 1 52908391 52910193 - TEC TEC MGP_BALBcJ_T0020985.1 MGP_BALBcJ_G0016187.1 mouse_genomes_project 1 84661439 84665329 + MGP_BALBcJ_P0020985 protein_coding protein_coding MGP_BALBcJ_T0020986.1 MGP_BALBcJ_G0016187.1 mouse_genomes_project 1 84661450 84664240 + MGP_BALBcJ_P0020986 protein_coding protein_coding MGP_BALBcJ_T0020987.1 MGP_BALBcJ_G0016187.1 mouse_genomes_project 1 84661454 84664458 + protein_coding processed_transcript MGP_BALBcJ_T0019248.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33705985 33726143 - MGP_BALBcJ_P0019248 Lman2l protein_coding protein_coding MGP_BALBcJ_T0019249.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33708179 33731952 - MGP_BALBcJ_P0019249 Lman2l protein_coding protein_coding MGP_BALBcJ_T0019250.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33709300 33728347 - Lman2l protein_coding retained_intron MGP_BALBcJ_T0019251.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33709300 33731952 - MGP_BALBcJ_P0019251 Lman2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019252.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33709300 33731952 - MGP_BALBcJ_P0019252 Lman2l protein_coding protein_coding MGP_BALBcJ_T0019253.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33710620 33714481 - MGP_BALBcJ_P0019253 Lman2l protein_coding protein_coding MGP_BALBcJ_T0019254.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33714506 33731952 - MGP_BALBcJ_P0019254 Lman2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019255.1 MGP_BALBcJ_G0015861.1 mouse_genomes_project 1 33730219 33731938 - Lman2l protein_coding retained_intron MGP_BALBcJ_T0011926.1 MGP_BALBcJ_G0010023.1 mouse_genomes_project 1 28229133 28229777 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019339.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34731111 34739251 + MGP_BALBcJ_P0019339 Unc50 protein_coding protein_coding MGP_BALBcJ_T0019340.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34731142 34739391 + MGP_BALBcJ_P0019340 Unc50 protein_coding protein_coding MGP_BALBcJ_T0019341.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34731149 34737745 + MGP_BALBcJ_P0019341 Unc50 protein_coding protein_coding MGP_BALBcJ_T0019342.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34731158 34737537 + MGP_BALBcJ_P0019342 Unc50 protein_coding protein_coding MGP_BALBcJ_T0019343.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34731174 34739254 + MGP_BALBcJ_P0019343 Unc50 protein_coding protein_coding MGP_BALBcJ_T0019344.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34731180 34732527 + MGP_BALBcJ_P0019344 Unc50 protein_coding protein_coding MGP_BALBcJ_T0019345.1 MGP_BALBcJ_G0015876.1 mouse_genomes_project 1 34732316 34737879 + Unc50 protein_coding retained_intron MGP_BALBcJ_T0005741.1 MGP_BALBcJ_G0004823.1 mouse_genomes_project 1 66023807 66025328 + Gm15671 lincRNA lincRNA MGP_BALBcJ_T0002981.1 MGP_BALBcJ_G0002793.1 mouse_genomes_project 1 191628610 191636182 + Gm26879 antisense antisense MGP_BALBcJ_T0005635.1 MGP_BALBcJ_G0004745.1 mouse_genomes_project 1 17991365 17993195 - 6720483E21Rik lincRNA lincRNA MGP_BALBcJ_T0022297.1 MGP_BALBcJ_G0016475.1 mouse_genomes_project 1 134783567 134814224 - MGP_BALBcJ_P0022297 Igfn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0022298.1 MGP_BALBcJ_G0016475.1 mouse_genomes_project 1 134783569 134793096 - MGP_BALBcJ_P0022298 Igfn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022299.1 MGP_BALBcJ_G0016475.1 mouse_genomes_project 1 134783576 134835957 - MGP_BALBcJ_P0022299 Igfn1 protein_coding protein_coding MGP_BALBcJ_T0022300.1 MGP_BALBcJ_G0016475.1 mouse_genomes_project 1 134784589 134812436 - MGP_BALBcJ_P0022300 Igfn1 protein_coding protein_coding MGP_BALBcJ_T0000780.1 MGP_BALBcJ_G0000714.1 mouse_genomes_project 1 186776957 186780852 + TEC TEC MGP_BALBcJ_T0024190.1 MGP_BALBcJ_G0016884.1 mouse_genomes_project 1 191307673 191375098 + MGP_BALBcJ_P0024190 Lpgat1 protein_coding protein_coding MGP_BALBcJ_T0024191.1 MGP_BALBcJ_G0016884.1 mouse_genomes_project 1 191307673 191309619 + MGP_BALBcJ_P0024191 Lpgat1 protein_coding protein_coding MGP_BALBcJ_T0024192.1 MGP_BALBcJ_G0016884.1 mouse_genomes_project 1 191307866 191310007 + Lpgat1 protein_coding retained_intron MGP_BALBcJ_T0024193.1 MGP_BALBcJ_G0016884.1 mouse_genomes_project 1 191308610 191370820 + MGP_BALBcJ_P0024193 Lpgat1 protein_coding protein_coding MGP_BALBcJ_T0024194.1 MGP_BALBcJ_G0016884.1 mouse_genomes_project 1 191308742 191350685 + MGP_BALBcJ_P0024194 Lpgat1 protein_coding protein_coding MGP_BALBcJ_T0000498.1 MGP_BALBcJ_G0000436.1 mouse_genomes_project 1 64788049 64792706 - TEC TEC MGP_BALBcJ_T0022940.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160276353 160287482 - MGP_BALBcJ_P0022940 Prdx6 protein_coding protein_coding MGP_BALBcJ_T0022941.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160277267 160287449 - MGP_BALBcJ_P0022941 Prdx6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022942.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160277816 160287432 - Prdx6 protein_coding processed_transcript MGP_BALBcJ_T0022943.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160277850 160287429 - MGP_BALBcJ_P0022943 Prdx6 protein_coding protein_coding MGP_BALBcJ_T0022944.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160277887 160287384 - Prdx6 protein_coding processed_transcript MGP_BALBcJ_T0022945.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160278060 160286817 - Prdx6 protein_coding processed_transcript MGP_BALBcJ_T0022946.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160279849 160287429 - Prdx6 protein_coding processed_transcript MGP_BALBcJ_T0022947.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160284863 160287425 - Prdx6 protein_coding retained_intron MGP_BALBcJ_T0022948.1 MGP_BALBcJ_G0016593.1 mouse_genomes_project 1 160285821 160287425 - Prdx6 protein_coding retained_intron MGP_BALBcJ_T0022233.1 MGP_BALBcJ_G0016464.1 mouse_genomes_project 1 134109705 134117719 - Timm17a protein_coding retained_intron MGP_BALBcJ_T0022234.1 MGP_BALBcJ_G0016464.1 mouse_genomes_project 1 134109807 134121558 - MGP_BALBcJ_P0022234 Timm17a protein_coding protein_coding MGP_BALBcJ_T0022235.1 MGP_BALBcJ_G0016464.1 mouse_genomes_project 1 134117014 134119223 - MGP_BALBcJ_P0022235 Timm17a protein_coding protein_coding MGP_BALBcJ_T0011875.1 MGP_BALBcJ_G0009972.1 mouse_genomes_project 1 9682628 9683315 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009461.1 MGP_BALBcJ_G0007586.1 mouse_genomes_project 1 46634804 46635246 + Gm22693 miRNA miRNA MGP_BALBcJ_T0022209.1 MGP_BALBcJ_G0016458.1 mouse_genomes_project 1 133788274 133910941 - MGP_BALBcJ_P0022209 Lgr6 protein_coding protein_coding MGP_BALBcJ_T0022210.1 MGP_BALBcJ_G0016458.1 mouse_genomes_project 1 133788282 133911215 - MGP_BALBcJ_P0022210 Lgr6 protein_coding protein_coding MGP_BALBcJ_T0022211.1 MGP_BALBcJ_G0016458.1 mouse_genomes_project 1 133808371 133827473 - Lgr6 protein_coding processed_transcript MGP_BALBcJ_T0021783.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126489560 126508992 + Ccnt2 protein_coding retained_intron MGP_BALBcJ_T0021784.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126489560 126511203 + Ccnt2 protein_coding retained_intron MGP_BALBcJ_T0021785.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126489560 126511203 + Ccnt2 protein_coding retained_intron MGP_BALBcJ_T0021786.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126489560 126513803 + Ccnt2 protein_coding retained_intron MGP_BALBcJ_T0021787.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126489560 126524845 + MGP_BALBcJ_P0021787 Ccnt2 protein_coding protein_coding MGP_BALBcJ_T0021788.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126489560 126521106 + MGP_BALBcJ_P0021788 Ccnt2 protein_coding protein_coding MGP_BALBcJ_T0021789.1 MGP_BALBcJ_G0016365.1 mouse_genomes_project 1 126511971 126524845 + Ccnt2 protein_coding processed_transcript MGP_BALBcJ_T0022341.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135305616 135334779 + Kif14 protein_coding retained_intron MGP_BALBcJ_T0022342.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135307208 135370509 + MGP_BALBcJ_P0022342 Kif14 protein_coding protein_coding MGP_BALBcJ_T0022343.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135307208 135366644 + MGP_BALBcJ_P0022343 Kif14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022344.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135307231 135370509 + MGP_BALBcJ_P0022344 Kif14 protein_coding protein_coding MGP_BALBcJ_T0022345.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135308276 135310995 + Kif14 protein_coding retained_intron MGP_BALBcJ_T0022346.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135315579 135319142 + Kif14 protein_coding processed_transcript MGP_BALBcJ_T0022347.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135315579 135319142 + Kif14 protein_coding processed_transcript MGP_BALBcJ_T0022348.1 MGP_BALBcJ_G0016485.1 mouse_genomes_project 1 135315579 135319142 + MGP_BALBcJ_P0022348 Kif14 protein_coding protein_coding MGP_BALBcJ_T0005737.1 MGP_BALBcJ_G0004819.1 mouse_genomes_project 1 62607698 62615944 + Gm28982 lincRNA lincRNA MGP_BALBcJ_T0019352.1 MGP_BALBcJ_G0015878.1 mouse_genomes_project 1 34911729 35022237 - MGP_BALBcJ_P0019352 2010300C02Rik protein_coding protein_coding MGP_BALBcJ_T0019353.1 MGP_BALBcJ_G0015878.1 mouse_genomes_project 1 34911729 34925222 - MGP_BALBcJ_P0019353 2010300C02Rik protein_coding protein_coding MGP_BALBcJ_T0019354.1 MGP_BALBcJ_G0015878.1 mouse_genomes_project 1 34939605 35021947 - MGP_BALBcJ_P0019354 2010300C02Rik protein_coding protein_coding MGP_BALBcJ_T0022119.1 MGP_BALBcJ_G0016437.1 mouse_genomes_project 1 132692885 132697014 - Optc protein_coding retained_intron MGP_BALBcJ_T0022120.1 MGP_BALBcJ_G0016437.1 mouse_genomes_project 1 132692885 132702857 - MGP_BALBcJ_P0022120 Optc protein_coding protein_coding MGP_BALBcJ_T0022121.1 MGP_BALBcJ_G0016437.1 mouse_genomes_project 1 132692886 132703684 - MGP_BALBcJ_P0022121 Optc protein_coding protein_coding MGP_BALBcJ_T0022122.1 MGP_BALBcJ_G0016437.1 mouse_genomes_project 1 132693385 132702811 - MGP_BALBcJ_P0022122 Optc protein_coding protein_coding MGP_BALBcJ_T0022123.1 MGP_BALBcJ_G0016437.1 mouse_genomes_project 1 132696520 132702687 - MGP_BALBcJ_P0022123 Optc protein_coding protein_coding MGP_BALBcJ_T0002725.1 MGP_BALBcJ_G0002601.1 mouse_genomes_project 1 2014894 2020780 + Gm16041 antisense antisense MGP_BALBcJ_T0021808.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126810214 126889511 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021809.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126810234 126885508 + MGP_BALBcJ_P0021809 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021810.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126810237 126943920 + MGP_BALBcJ_P0021810 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021811.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126810237 126895211 + MGP_BALBcJ_P0021811 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021812.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126810244 126819041 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021813.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126848356 126893252 + MGP_BALBcJ_P0021813 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021814.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126848379 126859715 + MGP_BALBcJ_P0021814 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021815.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126858202 126885561 + MGP_BALBcJ_P0021815 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021816.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126878000 126884522 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021817.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126881056 126885496 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021818.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126883215 126895011 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021819.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126885521 126899732 + MGP_BALBcJ_P0021819 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021820.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126888119 126917698 + MGP_BALBcJ_P0021820 R3hdm1 protein_coding protein_coding MGP_BALBcJ_T0021821.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126899062 126902772 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021822.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126913542 126943919 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0021823.1 MGP_BALBcJ_G0016369.1 mouse_genomes_project 1 126941562 126943920 + R3hdm1 protein_coding retained_intron MGP_BALBcJ_T0019301.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34081311 34233876 - MGP_BALBcJ_P0019301 Tmem131 protein_coding protein_coding MGP_BALBcJ_T0019302.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34081314 34234171 - MGP_BALBcJ_P0019302 Tmem131 protein_coding protein_coding MGP_BALBcJ_T0019303.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34090062 34105403 - Tmem131 protein_coding retained_intron MGP_BALBcJ_T0019304.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34097355 34099353 - Tmem131 protein_coding retained_intron MGP_BALBcJ_T0019305.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34102958 34107578 - MGP_BALBcJ_P0019305 Tmem131 protein_coding protein_coding MGP_BALBcJ_T0019306.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34104736 34107969 - MGP_BALBcJ_P0019306 Tmem131 protein_coding protein_coding MGP_BALBcJ_T0019307.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34107476 34114594 - MGP_BALBcJ_P0019307 Tmem131 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019308.1 MGP_BALBcJ_G0015871.1 mouse_genomes_project 1 34131522 34238015 - MGP_BALBcJ_P0019308 Tmem131 protein_coding protein_coding MGP_BALBcJ_T0005778.1 MGP_BALBcJ_G0004849.1 mouse_genomes_project 1 78214088 78222271 + 9830004L10Rik lincRNA lincRNA MGP_BALBcJ_T0005779.1 MGP_BALBcJ_G0004849.1 mouse_genomes_project 1 78216790 78222271 + 9830004L10Rik lincRNA lincRNA MGP_BALBcJ_T0005780.1 MGP_BALBcJ_G0004849.1 mouse_genomes_project 1 78216812 78222316 + 9830004L10Rik lincRNA lincRNA MGP_BALBcJ_T0019975.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57037552 57056824 - MGP_BALBcJ_P0019975 Tmem237 protein_coding protein_coding MGP_BALBcJ_T0019976.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57037559 57056536 - MGP_BALBcJ_P0019976 Tmem237 protein_coding protein_coding MGP_BALBcJ_T0019977.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57037873 57057107 - MGP_BALBcJ_P0019977 Tmem237 protein_coding protein_coding MGP_BALBcJ_T0019978.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57044613 57056837 - MGP_BALBcJ_P0019978 Tmem237 protein_coding protein_coding MGP_BALBcJ_T0019979.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57045202 57051037 - Tmem237 protein_coding retained_intron MGP_BALBcJ_T0019980.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57045507 57057133 - MGP_BALBcJ_P0019980 Tmem237 protein_coding protein_coding MGP_BALBcJ_T0019981.1 MGP_BALBcJ_G0016000.1 mouse_genomes_project 1 57046814 57052679 - Tmem237 protein_coding retained_intron MGP_BALBcJ_T0005903.1 MGP_BALBcJ_G0004951.1 mouse_genomes_project 1 137713991 137714665 - 1700019P21Rik lincRNA lincRNA MGP_BALBcJ_T0023961.1 MGP_BALBcJ_G0016837.1 mouse_genomes_project 1 182609996 182751199 - MGP_BALBcJ_P0023961 Disp1 protein_coding protein_coding MGP_BALBcJ_T0023962.1 MGP_BALBcJ_G0016837.1 mouse_genomes_project 1 182609996 182676001 - MGP_BALBcJ_P0023962 Disp1 protein_coding protein_coding MGP_BALBcJ_T0023963.1 MGP_BALBcJ_G0016837.1 mouse_genomes_project 1 182609996 182751194 - MGP_BALBcJ_P0023963 Disp1 protein_coding protein_coding MGP_BALBcJ_T0023964.1 MGP_BALBcJ_G0016837.1 mouse_genomes_project 1 182619914 182676071 - Disp1 protein_coding retained_intron MGP_BALBcJ_T0023965.1 MGP_BALBcJ_G0016837.1 mouse_genomes_project 1 182658315 182751231 - MGP_BALBcJ_P0023965 Disp1 protein_coding protein_coding MGP_BALBcJ_T0012277.1 MGP_BALBcJ_G0010374.1 mouse_genomes_project 1 158161303 158161786 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012165.1 MGP_BALBcJ_G0010262.1 mouse_genomes_project 1 110521182 110521745 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002851.1 MGP_BALBcJ_G0002693.1 mouse_genomes_project 1 117086788 117087419 - 2900060B14Rik antisense antisense MGP_BALBcJ_T0002852.1 MGP_BALBcJ_G0002693.1 mouse_genomes_project 1 117086821 117086899 - 2900060B14Rik antisense antisense MGP_BALBcJ_T0005832.1 MGP_BALBcJ_G0004895.1 mouse_genomes_project 1 103577463 103588675 + Gm29012 lincRNA lincRNA MGP_BALBcJ_T0100411.1 MGP_BALBcJ_G0038447.1 mouse_genomes_project 1 188166849 188166980 - Gm25095 snoRNA snoRNA MGP_BALBcJ_T0000361.1 MGP_BALBcJ_G0000302.1 mouse_genomes_project 1 6228230 6229257 - TEC TEC MGP_BALBcJ_T0019186.1 MGP_BALBcJ_G0015850.1 mouse_genomes_project 1 31820620 31831928 - MGP_BALBcJ_P0019186 protein_coding protein_coding MGP_BALBcJ_T0023258.1 MGP_BALBcJ_G0016665.1 mouse_genomes_project 1 168971760 169112260 - MGP_BALBcJ_P0023258 Ddr2 protein_coding protein_coding MGP_BALBcJ_T0023259.1 MGP_BALBcJ_G0016665.1 mouse_genomes_project 1 168971761 169090183 - MGP_BALBcJ_P0023259 Ddr2 protein_coding protein_coding MGP_BALBcJ_T0023260.1 MGP_BALBcJ_G0016665.1 mouse_genomes_project 1 168977225 169112200 - MGP_BALBcJ_P0023260 Ddr2 protein_coding protein_coding MGP_BALBcJ_T0023261.1 MGP_BALBcJ_G0016665.1 mouse_genomes_project 1 169004390 169112428 - MGP_BALBcJ_P0023261 Ddr2 protein_coding protein_coding MGP_BALBcJ_T0023262.1 MGP_BALBcJ_G0016665.1 mouse_genomes_project 1 169036477 169112461 - Ddr2 protein_coding retained_intron MGP_BALBcJ_T0023263.1 MGP_BALBcJ_G0016665.1 mouse_genomes_project 1 169084874 169098529 - Ddr2 protein_coding processed_transcript MGP_BALBcJ_T0017050.1 MGP_BALBcJ_G0015065.1 mouse_genomes_project 1 194557869 194603421 + A330023F24Rik processed_transcript lincRNA MGP_BALBcJ_T0017051.1 MGP_BALBcJ_G0015065.1 mouse_genomes_project 1 194557879 194609308 + A330023F24Rik processed_transcript retained_intron MGP_BALBcJ_T0017052.1 MGP_BALBcJ_G0015065.1 mouse_genomes_project 1 194599349 194618807 + A330023F24Rik processed_transcript lincRNA MGP_BALBcJ_T0017053.1 MGP_BALBcJ_G0015065.1 mouse_genomes_project 1 194605988 194619782 + A330023F24Rik processed_transcript retained_intron MGP_BALBcJ_T0024226.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192025697 192295682 - MGP_BALBcJ_P0024226 Hhat protein_coding protein_coding MGP_BALBcJ_T0024227.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192041818 192295692 - MGP_BALBcJ_P0024227 Hhat protein_coding protein_coding MGP_BALBcJ_T0024228.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192072103 192295687 - MGP_BALBcJ_P0024228 Hhat protein_coding non_stop_decay MGP_BALBcJ_T0024229.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192148952 192250266 - Hhat protein_coding processed_transcript MGP_BALBcJ_T0024230.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192176542 192210682 - Hhat protein_coding processed_transcript MGP_BALBcJ_T0024231.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192250254 192261659 - Hhat protein_coding processed_transcript MGP_BALBcJ_T0024232.1 MGP_BALBcJ_G0016891.1 mouse_genomes_project 1 192260789 192295461 - Hhat protein_coding processed_transcript MGP_BALBcJ_T0019715.1 MGP_BALBcJ_G0015950.1 mouse_genomes_project 1 50372718 50406054 - MGP_BALBcJ_P0019715 Inpp1 protein_coding protein_coding MGP_BALBcJ_T0019716.1 MGP_BALBcJ_G0015950.1 mouse_genomes_project 1 50378050 50387872 - MGP_BALBcJ_P0019716 Inpp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019717.1 MGP_BALBcJ_G0015950.1 mouse_genomes_project 1 50378438 50383433 - Inpp1 protein_coding retained_intron MGP_BALBcJ_T0019718.1 MGP_BALBcJ_G0015950.1 mouse_genomes_project 1 50383049 50405934 - MGP_BALBcJ_P0019718 Inpp1 protein_coding protein_coding MGP_BALBcJ_T0019719.1 MGP_BALBcJ_G0015950.1 mouse_genomes_project 1 50385362 50405817 - Inpp1 protein_coding retained_intron MGP_BALBcJ_T0019720.1 MGP_BALBcJ_G0015950.1 mouse_genomes_project 1 50385449 50388743 - MGP_BALBcJ_P0019720 Inpp1 protein_coding protein_coding MGP_BALBcJ_T0012288.1 MGP_BALBcJ_G0010385.1 mouse_genomes_project 1 163177680 163178035 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012317.1 MGP_BALBcJ_G0010414.1 mouse_genomes_project 1 176566714 176567031 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021487.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96218409 96238841 + MGP_BALBcJ_P0021487 Gin1 protein_coding protein_coding MGP_BALBcJ_T0021488.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96218416 96226370 + MGP_BALBcJ_P0021488 Gin1 protein_coding protein_coding MGP_BALBcJ_T0021489.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96218434 96239581 + MGP_BALBcJ_P0021489 Gin1 protein_coding protein_coding MGP_BALBcJ_T0021490.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96218438 96219243 + Gin1 protein_coding processed_transcript MGP_BALBcJ_T0021491.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96218447 96238878 + MGP_BALBcJ_P0021491 Gin1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021492.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96221945 96224271 + Gin1 protein_coding retained_intron MGP_BALBcJ_T0021493.1 MGP_BALBcJ_G0016300.1 mouse_genomes_project 1 96225629 96230485 + MGP_BALBcJ_P0021493 Gin1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023307.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169974582 169992465 - MGP_BALBcJ_P0023307 Fcgr2b protein_coding protein_coding MGP_BALBcJ_T0023308.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169977533 169992465 - MGP_BALBcJ_P0023308 Fcgr2b protein_coding protein_coding MGP_BALBcJ_T0023309.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169977709 169978606 - Fcgr2b protein_coding processed_transcript MGP_BALBcJ_T0023310.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169977744 169992885 - MGP_BALBcJ_P0023310 Fcgr2b protein_coding protein_coding MGP_BALBcJ_T0023311.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169977968 169992465 - MGP_BALBcJ_P0023311 Fcgr2b protein_coding protein_coding MGP_BALBcJ_T0023312.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169981278 169992465 - Fcgr2b protein_coding retained_intron MGP_BALBcJ_T0023313.1 MGP_BALBcJ_G0016679.1 mouse_genomes_project 1 169986205 169992465 - Fcgr2b protein_coding retained_intron MGP_BALBcJ_T0000395.1 MGP_BALBcJ_G0000335.1 mouse_genomes_project 1 21146065 21146455 + TEC TEC MGP_BALBcJ_T0000396.1 MGP_BALBcJ_G0000335.1 mouse_genomes_project 1 21146067 21146455 + TEC TEC MGP_BALBcJ_T0000709.1 MGP_BALBcJ_G0000645.1 mouse_genomes_project 1 159936312 159938079 + TEC TEC MGP_BALBcJ_T0098788.1 MGP_BALBcJ_G0036842.1 mouse_genomes_project 1 67093769 67108581 - Gm16076 sense_intronic sense_intronic MGP_BALBcJ_T0012150.1 MGP_BALBcJ_G0010247.1 mouse_genomes_project 1 105749895 105751149 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012036.1 MGP_BALBcJ_G0010133.1 mouse_genomes_project 1 58493385 58493802 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022180.1 MGP_BALBcJ_G0016453.1 mouse_genomes_project 1 133339248 133347969 - MGP_BALBcJ_P0022180 Mgat4e protein_coding protein_coding MGP_BALBcJ_T0022181.1 MGP_BALBcJ_G0016453.1 mouse_genomes_project 1 133339252 133345328 - MGP_BALBcJ_P0022181 Mgat4e protein_coding protein_coding MGP_BALBcJ_T0022182.1 MGP_BALBcJ_G0016453.1 mouse_genomes_project 1 133339262 133345256 - MGP_BALBcJ_P0022182 Mgat4e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020530.1 MGP_BALBcJ_G0016106.1 mouse_genomes_project 1 72990232 72996585 - MGP_BALBcJ_P0020530 Ihh protein_coding protein_coding MGP_BALBcJ_T0020531.1 MGP_BALBcJ_G0016106.1 mouse_genomes_project 1 72992636 72996355 - Ihh protein_coding retained_intron MGP_BALBcJ_T0000594.1 MGP_BALBcJ_G0000532.1 mouse_genomes_project 1 122243920 122247591 - TEC TEC MGP_BALBcJ_T0022351.1 MGP_BALBcJ_G0016487.1 mouse_genomes_project 1 135704102 135825871 - MGP_BALBcJ_P0022351 Nr5a2 protein_coding protein_coding MGP_BALBcJ_T0022352.1 MGP_BALBcJ_G0016487.1 mouse_genomes_project 1 135705807 135814314 - MGP_BALBcJ_P0022352 Nr5a2 protein_coding protein_coding MGP_BALBcJ_T0022353.1 MGP_BALBcJ_G0016487.1 mouse_genomes_project 1 135706845 135825803 - MGP_BALBcJ_P0022353 Nr5a2 protein_coding protein_coding MGP_BALBcJ_T0022354.1 MGP_BALBcJ_G0016487.1 mouse_genomes_project 1 135706994 135818211 - MGP_BALBcJ_P0022354 Nr5a2 protein_coding protein_coding MGP_BALBcJ_T0022355.1 MGP_BALBcJ_G0016487.1 mouse_genomes_project 1 135752045 135805340 - Nr5a2 protein_coding retained_intron MGP_BALBcJ_T0022356.1 MGP_BALBcJ_G0016487.1 mouse_genomes_project 1 135805741 135813925 - MGP_BALBcJ_P0022356 Nr5a2 protein_coding protein_coding MGP_BALBcJ_T0011232.1 MGP_BALBcJ_G0009357.1 mouse_genomes_project 1 102942337 102942667 + Gm23537 misc_RNA misc_RNA MGP_BALBcJ_T0000566.1 MGP_BALBcJ_G0000504.1 mouse_genomes_project 1 95985007 95986192 - TEC TEC MGP_BALBcJ_T0021274.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90311163 90529131 - MGP_BALBcJ_P0021274 Hdac4 protein_coding unknown_likely_coding MGP_BALBcJ_T0021275.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90311163 90561409 - MGP_BALBcJ_P0021275 Hdac4 protein_coding protein_coding MGP_BALBcJ_T0021276.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90315132 90529247 - MGP_BALBcJ_P0021276 Hdac4 protein_coding protein_coding MGP_BALBcJ_T0021277.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90315331 90389267 - Hdac4 protein_coding processed_transcript MGP_BALBcJ_T0021278.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90315576 90317233 - Hdac4 protein_coding retained_intron MGP_BALBcJ_T0021279.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90337759 90357892 - MGP_BALBcJ_P0021279 Hdac4 protein_coding protein_coding MGP_BALBcJ_T0021280.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90371427 90375028 - Hdac4 protein_coding retained_intron MGP_BALBcJ_T0021281.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90386085 90389272 - Hdac4 protein_coding retained_intron MGP_BALBcJ_T0021282.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90412371 90561365 - MGP_BALBcJ_P0021282 Hdac4 protein_coding protein_coding MGP_BALBcJ_T0021283.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90412382 90494172 - Hdac4 protein_coding processed_transcript MGP_BALBcJ_T0021284.1 MGP_BALBcJ_G0016251.1 mouse_genomes_project 1 90412466 90494172 - Hdac4 protein_coding processed_transcript MGP_BALBcJ_T0021187.1 MGP_BALBcJ_G0016234.1 mouse_genomes_project 1 89294000 89329680 + MGP_BALBcJ_P0021187 Mlph protein_coding protein_coding MGP_BALBcJ_T0021188.1 MGP_BALBcJ_G0016234.1 mouse_genomes_project 1 89306594 89307348 + MGP_BALBcJ_P0021188 Mlph protein_coding protein_coding MGP_BALBcJ_T0021189.1 MGP_BALBcJ_G0016234.1 mouse_genomes_project 1 89318076 89319147 + Mlph protein_coding retained_intron MGP_BALBcJ_T0022637.1 MGP_BALBcJ_G0016543.1 mouse_genomes_project 1 152749240 152760787 + MGP_BALBcJ_P0022637 Rnasel protein_coding protein_coding MGP_BALBcJ_T0022638.1 MGP_BALBcJ_G0016543.1 mouse_genomes_project 1 152751704 152760722 + MGP_BALBcJ_P0022638 Rnasel protein_coding protein_coding MGP_BALBcJ_T0022639.1 MGP_BALBcJ_G0016543.1 mouse_genomes_project 1 152751720 152760570 + Rnasel protein_coding retained_intron MGP_BALBcJ_T0022640.1 MGP_BALBcJ_G0016543.1 mouse_genomes_project 1 152752609 152763978 + MGP_BALBcJ_P0022640 Rnasel protein_coding protein_coding MGP_BALBcJ_T0022641.1 MGP_BALBcJ_G0016543.1 mouse_genomes_project 1 152755743 152760570 + Rnasel protein_coding processed_transcript MGP_BALBcJ_T0002791.1 MGP_BALBcJ_G0002649.1 mouse_genomes_project 1 57056562 57058852 + G730003C15Rik antisense antisense MGP_BALBcJ_T0002792.1 MGP_BALBcJ_G0002649.1 mouse_genomes_project 1 57056562 57058854 + G730003C15Rik antisense antisense MGP_BALBcJ_T0002794.1 MGP_BALBcJ_G0002651.1 mouse_genomes_project 1 57466626 57482338 - Gm28411 antisense antisense MGP_BALBcJ_T0002796.1 MGP_BALBcJ_G0002651.1 mouse_genomes_project 1 57475821 57483071 - Gm28411 antisense antisense MGP_BALBcJ_T0000586.1 MGP_BALBcJ_G0000524.1 mouse_genomes_project 1 120364225 120364974 + TEC TEC MGP_BALBcJ_T0022090.1 MGP_BALBcJ_G0016431.1 mouse_genomes_project 1 132395486 132401638 - MGP_BALBcJ_P0022090 Snrpe protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022091.1 MGP_BALBcJ_G0016431.1 mouse_genomes_project 1 132395611 132401808 - MGP_BALBcJ_P0022091 Snrpe protein_coding protein_coding MGP_BALBcJ_T0022092.1 MGP_BALBcJ_G0016431.1 mouse_genomes_project 1 132397677 132401840 - MGP_BALBcJ_P0022092 Snrpe protein_coding protein_coding MGP_BALBcJ_T0022093.1 MGP_BALBcJ_G0016431.1 mouse_genomes_project 1 132398113 132401516 - MGP_BALBcJ_P0022093 Snrpe protein_coding protein_coding MGP_BALBcJ_T0022094.1 MGP_BALBcJ_G0016431.1 mouse_genomes_project 1 132400451 132401806 - MGP_BALBcJ_P0022094 Snrpe protein_coding protein_coding MGP_BALBcJ_T0011909.1 MGP_BALBcJ_G0010006.1 mouse_genomes_project 1 20620078 20621067 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005647.1 MGP_BALBcJ_G0004756.1 mouse_genomes_project 1 30460703 30463414 - Gm37591 lincRNA lincRNA MGP_BALBcJ_T0011961.1 MGP_BALBcJ_G0010058.1 mouse_genomes_project 1 36217938 36218710 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000733.1 MGP_BALBcJ_G0000669.1 mouse_genomes_project 1 171501022 171503756 - TEC TEC MGP_BALBcJ_T0100318.1 MGP_BALBcJ_G0038354.1 mouse_genomes_project 1 10805285 10805416 - Gm26273 snoRNA snoRNA MGP_BALBcJ_T0000513.1 MGP_BALBcJ_G0000451.1 mouse_genomes_project 1 72999164 73000754 + TEC TEC MGP_BALBcJ_T0021480.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96149309 96158416 - Ppip5k2 protein_coding retained_intron MGP_BALBcJ_T0021481.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96149309 96218649 - MGP_BALBcJ_P0021481 Ppip5k2 protein_coding protein_coding MGP_BALBcJ_T0021482.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96149309 96218649 - MGP_BALBcJ_P0021482 Ppip5k2 protein_coding protein_coding MGP_BALBcJ_T0021483.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96150926 96209673 - MGP_BALBcJ_P0021483 Ppip5k2 protein_coding protein_coding MGP_BALBcJ_T0021484.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96154700 96159813 - MGP_BALBcJ_P0021484 Ppip5k2 protein_coding protein_coding MGP_BALBcJ_T0021485.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96162051 96164564 - Ppip5k2 protein_coding retained_intron MGP_BALBcJ_T0021486.1 MGP_BALBcJ_G0016299.1 mouse_genomes_project 1 96187126 96191085 - Ppip5k2 protein_coding retained_intron MGP_BALBcJ_T0012182.1 MGP_BALBcJ_G0010279.1 mouse_genomes_project 1 117874036 117874828 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000547.1 MGP_BALBcJ_G0000485.1 mouse_genomes_project 1 85067228 85069857 + TEC TEC MGP_BALBcJ_T0012037.1 MGP_BALBcJ_G0010134.1 mouse_genomes_project 1 58657910 58658976 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102090.1 MGP_BALBcJ_G0039907.1 mouse_genomes_project 1 160207611 160271401 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000516.1 MGP_BALBcJ_G0000454.1 mouse_genomes_project 1 76409700 76410509 + TEC TEC MGP_BALBcJ_T0023898.1 MGP_BALBcJ_G0016824.1 mouse_genomes_project 1 181292944 181309964 + protein_coding retained_intron MGP_BALBcJ_T0023899.1 MGP_BALBcJ_G0016824.1 mouse_genomes_project 1 181294992 181324162 + MGP_BALBcJ_P0023899 protein_coding protein_coding MGP_BALBcJ_T0023900.1 MGP_BALBcJ_G0016824.1 mouse_genomes_project 1 181296696 181301913 + protein_coding processed_transcript MGP_BALBcJ_T0021401.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881093 91901623 + MGP_BALBcJ_P0021401 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021402.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881096 91903010 + MGP_BALBcJ_P0021402 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021403.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881107 91912729 + MGP_BALBcJ_P0021403 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021404.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881124 91900078 + Sept2 protein_coding retained_intron MGP_BALBcJ_T0021405.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881138 91899684 + MGP_BALBcJ_P0021405 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021406.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881162 91884469 + Sept2 protein_coding retained_intron MGP_BALBcJ_T0021407.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881162 91903014 + MGP_BALBcJ_P0021407 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021408.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881211 91903039 + MGP_BALBcJ_P0021408 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021409.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881323 91901541 + MGP_BALBcJ_P0021409 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021410.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881326 91901623 + MGP_BALBcJ_P0021410 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021411.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91881576 91903037 + MGP_BALBcJ_P0021411 Sept2 protein_coding protein_coding MGP_BALBcJ_T0021412.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91907697 91909524 + Sept2 protein_coding retained_intron MGP_BALBcJ_T0021413.1 MGP_BALBcJ_G0016280.1 mouse_genomes_project 1 91908072 91909851 + MGP_BALBcJ_P0021413 Sept2 protein_coding protein_coding MGP_BALBcJ_T0002838.1 MGP_BALBcJ_G0002685.1 mouse_genomes_project 1 91324094 91341170 - 9430060I03Rik antisense antisense MGP_BALBcJ_T0021075.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773210 85788222 + Inpp5d protein_coding retained_intron MGP_BALBcJ_T0021076.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773216 85874380 + MGP_BALBcJ_P0021076 Inpp5d protein_coding protein_coding MGP_BALBcJ_T0021077.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773243 85798209 + Inpp5d protein_coding processed_transcript MGP_BALBcJ_T0021078.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773252 85874380 + MGP_BALBcJ_P0021078 Inpp5d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021079.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773253 85873571 + MGP_BALBcJ_P0021079 Inpp5d protein_coding protein_coding MGP_BALBcJ_T0021080.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773343 85874387 + MGP_BALBcJ_P0021080 Inpp5d protein_coding protein_coding MGP_BALBcJ_T0021081.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85773481 85820925 + MGP_BALBcJ_P0021081 Inpp5d protein_coding protein_coding MGP_BALBcJ_T0021082.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85774528 85820849 + MGP_BALBcJ_P0021082 Inpp5d protein_coding protein_coding MGP_BALBcJ_T0021083.1 MGP_BALBcJ_G0016206.1 mouse_genomes_project 1 85863217 85866036 + Inpp5d protein_coding processed_transcript MGP_BALBcJ_T0100360.1 MGP_BALBcJ_G0038396.1 mouse_genomes_project 1 84484305 84484375 - Snord82 snoRNA snoRNA MGP_BALBcJ_T0012153.1 MGP_BALBcJ_G0010250.1 mouse_genomes_project 1 106470173 106470359 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019391.1 MGP_BALBcJ_G0015886.1 mouse_genomes_project 1 35303934 35361844 + MGP_BALBcJ_P0019391 Eif5b protein_coding protein_coding MGP_BALBcJ_T0019392.1 MGP_BALBcJ_G0015886.1 mouse_genomes_project 1 35304053 35358286 + Eif5b protein_coding retained_intron MGP_BALBcJ_T0019393.1 MGP_BALBcJ_G0015886.1 mouse_genomes_project 1 35348045 35351733 + Eif5b protein_coding retained_intron MGP_BALBcJ_T0019394.1 MGP_BALBcJ_G0015886.1 mouse_genomes_project 1 35349120 35352969 + Eif5b protein_coding processed_transcript MGP_BALBcJ_T0019395.1 MGP_BALBcJ_G0015886.1 mouse_genomes_project 1 35350926 35355096 + Eif5b protein_coding retained_intron MGP_BALBcJ_T0005882.1 MGP_BALBcJ_G0004935.1 mouse_genomes_project 1 133230207 133234177 + Platr1 lincRNA lincRNA MGP_BALBcJ_T0011857.1 MGP_BALBcJ_G0009954.1 mouse_genomes_project 1 5496521 5496921 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011984.1 MGP_BALBcJ_G0010081.1 mouse_genomes_project 1 42911708 42912436 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021314.1 MGP_BALBcJ_G0016263.1 mouse_genomes_project 1 91215091 91247636 + MGP_BALBcJ_P0021314 Gpc1 protein_coding protein_coding MGP_BALBcJ_T0021315.1 MGP_BALBcJ_G0016263.1 mouse_genomes_project 1 91215415 91219124 + Gpc1 protein_coding processed_transcript MGP_BALBcJ_T0021316.1 MGP_BALBcJ_G0016263.1 mouse_genomes_project 1 91236984 91239755 + Gpc1 protein_coding retained_intron MGP_BALBcJ_T0021317.1 MGP_BALBcJ_G0016263.1 mouse_genomes_project 1 91240348 91244379 + Gpc1 protein_coding retained_intron MGP_BALBcJ_T0021318.1 MGP_BALBcJ_G0016263.1 mouse_genomes_project 1 91240554 91244452 + Gpc1 protein_coding retained_intron MGP_BALBcJ_T0023332.1 MGP_BALBcJ_G0016685.1 mouse_genomes_project 1 170236814 170259753 - MGP_BALBcJ_P0023332 Pcp4l1 protein_coding protein_coding MGP_BALBcJ_T0000449.1 MGP_BALBcJ_G0000387.1 mouse_genomes_project 1 37388635 37389965 - TEC TEC MGP_BALBcJ_T0022129.1 MGP_BALBcJ_G0016441.1 mouse_genomes_project 1 132909440 132945781 + MGP_BALBcJ_P0022129 Chit1 protein_coding protein_coding MGP_BALBcJ_T0022130.1 MGP_BALBcJ_G0016441.1 mouse_genomes_project 1 132909440 132945781 + MGP_BALBcJ_P0022130 Chit1 protein_coding protein_coding MGP_BALBcJ_T0022131.1 MGP_BALBcJ_G0016441.1 mouse_genomes_project 1 132932295 132945780 + MGP_BALBcJ_P0022131 Chit1 protein_coding protein_coding MGP_BALBcJ_T0012225.1 MGP_BALBcJ_G0010322.1 mouse_genomes_project 1 137534963 137535285 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021146.1 MGP_BALBcJ_G0016223.1 mouse_genomes_project 1 86736599 86750103 + MGP_BALBcJ_P0021146 Spp2 protein_coding protein_coding MGP_BALBcJ_T0021147.1 MGP_BALBcJ_G0016223.1 mouse_genomes_project 1 86736855 86755867 + MGP_BALBcJ_P0021147 Spp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021649.1 MGP_BALBcJ_G0016335.1 mouse_genomes_project 1 117252266 117263585 + Tfcp2l1 protein_coding processed_transcript MGP_BALBcJ_T0021650.1 MGP_BALBcJ_G0016335.1 mouse_genomes_project 1 117252267 117312444 + MGP_BALBcJ_P0021650 Tfcp2l1 protein_coding protein_coding MGP_BALBcJ_T0002940.1 MGP_BALBcJ_G0002762.1 mouse_genomes_project 1 176055472 176059831 + Gm36992 antisense antisense MGP_BALBcJ_T0012244.1 MGP_BALBcJ_G0010341.1 mouse_genomes_project 1 145296669 145297270 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100391.1 MGP_BALBcJ_G0038427.1 mouse_genomes_project 1 159671808 159671940 + Gm23528 snoRNA snoRNA MGP_BALBcJ_T0011960.1 MGP_BALBcJ_G0010057.1 mouse_genomes_project 1 36026239 36026741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000518.1 MGP_BALBcJ_G0000456.1 mouse_genomes_project 1 77655261 77657217 - TEC TEC MGP_BALBcJ_T0005852.1 MGP_BALBcJ_G0004910.1 mouse_genomes_project 1 118540686 118544366 + Gm28209 lincRNA lincRNA MGP_BALBcJ_T0022037.1 MGP_BALBcJ_G0016420.1 mouse_genomes_project 1 131662321 131721865 + MGP_BALBcJ_P0022037 Lrrn2 protein_coding protein_coding MGP_BALBcJ_T0022038.1 MGP_BALBcJ_G0016420.1 mouse_genomes_project 1 131662403 131719010 + Lrrn2 protein_coding processed_transcript MGP_BALBcJ_T0020441.1 MGP_BALBcJ_G0016088.1 mouse_genomes_project 1 72431597 72436765 + MGP_BALBcJ_P0020441 Ctdsp1 protein_coding protein_coding MGP_BALBcJ_T0020442.1 MGP_BALBcJ_G0016088.1 mouse_genomes_project 1 72432250 72434158 + MGP_BALBcJ_P0020442 Ctdsp1 protein_coding protein_coding MGP_BALBcJ_T0000598.1 MGP_BALBcJ_G0000536.1 mouse_genomes_project 1 124642078 124644775 - TEC TEC MGP_BALBcJ_T0023613.1 MGP_BALBcJ_G0016755.1 mouse_genomes_project 1 173205022 173260083 - MGP_BALBcJ_P0023613 Ifi202b protein_coding protein_coding MGP_BALBcJ_T0000769.1 MGP_BALBcJ_G0000703.1 mouse_genomes_project 1 182050657 182054799 + TEC TEC MGP_BALBcJ_T0021159.1 MGP_BALBcJ_G0016228.1 mouse_genomes_project 1 88284539 88287743 - MGP_BALBcJ_P0021159 Gbx2 protein_coding protein_coding MGP_BALBcJ_T0021160.1 MGP_BALBcJ_G0016228.1 mouse_genomes_project 1 88284549 88285769 - Gbx2 protein_coding retained_intron MGP_BALBcJ_T0022642.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152779181 152809898 - MGP_BALBcJ_P0022642 Rgsl1 protein_coding protein_coding MGP_BALBcJ_T0022643.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152779186 152847284 - MGP_BALBcJ_P0022643 Rgsl1 protein_coding protein_coding MGP_BALBcJ_T0022644.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152779192 152827919 - MGP_BALBcJ_P0022644 Rgsl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022645.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152781488 152790522 - Rgsl1 protein_coding processed_transcript MGP_BALBcJ_T0022646.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152781489 152847256 - MGP_BALBcJ_P0022646 Rgsl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0022647.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152784943 152847276 - MGP_BALBcJ_P0022647 Rgsl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022648.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152792372 152823955 - Rgsl1 protein_coding retained_intron MGP_BALBcJ_T0022649.1 MGP_BALBcJ_G0016544.1 mouse_genomes_project 1 152800868 152815572 - Rgsl1 protein_coding processed_transcript MGP_BALBcJ_T0012231.1 MGP_BALBcJ_G0010328.1 mouse_genomes_project 1 138882268 138882689 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000798.1 MGP_BALBcJ_G0000731.1 mouse_genomes_project 1 194237868 194241432 + TEC TEC MGP_BALBcJ_T0012264.1 MGP_BALBcJ_G0010361.1 mouse_genomes_project 1 152309188 152310235 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005664.1 MGP_BALBcJ_G0004771.1 mouse_genomes_project 1 37162069 37168592 - 1700066B17Rik lincRNA lincRNA MGP_BALBcJ_T0005665.1 MGP_BALBcJ_G0004771.1 mouse_genomes_project 1 37165317 37170223 - 1700066B17Rik lincRNA lincRNA MGP_BALBcJ_T0005666.1 MGP_BALBcJ_G0004771.1 mouse_genomes_project 1 37165322 37170227 - 1700066B17Rik lincRNA lincRNA MGP_BALBcJ_T0012258.1 MGP_BALBcJ_G0010355.1 mouse_genomes_project 1 150506269 150507138 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017008.1 MGP_BALBcJ_G0015055.1 mouse_genomes_project 1 152398217 152401415 - processed_transcript retained_intron MGP_BALBcJ_T0017009.1 MGP_BALBcJ_G0015055.1 mouse_genomes_project 1 152398217 152402197 - processed_transcript processed_transcript MGP_BALBcJ_T0023617.1 MGP_BALBcJ_G0016758.1 mouse_genomes_project 1 173303186 173304125 + MGP_BALBcJ_P0023617 Olfr432 protein_coding protein_coding MGP_BALBcJ_T0019072.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22227250 22389538 - MGP_BALBcJ_P0019072 Adgrb3 protein_coding protein_coding MGP_BALBcJ_T0019073.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22227324 22994068 - MGP_BALBcJ_P0019073 Adgrb3 protein_coding protein_coding MGP_BALBcJ_T0019074.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22227324 22997444 - MGP_BALBcJ_P0019074 Adgrb3 protein_coding protein_coding MGP_BALBcJ_T0019075.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22227324 22997639 - MGP_BALBcJ_P0019075 Adgrb3 protein_coding protein_coding MGP_BALBcJ_T0019076.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22227452 22994689 - MGP_BALBcJ_P0019076 Adgrb3 protein_coding protein_coding MGP_BALBcJ_T0019077.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22227465 22389812 - Adgrb3 protein_coding retained_intron MGP_BALBcJ_T0019078.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22254416 22389758 - Adgrb3 protein_coding retained_intron MGP_BALBcJ_T0019079.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22289253 22364584 - Adgrb3 protein_coding processed_transcript MGP_BALBcJ_T0019080.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22363272 22365556 - Adgrb3 protein_coding retained_intron MGP_BALBcJ_T0019081.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22378795 22389539 - Adgrb3 protein_coding retained_intron MGP_BALBcJ_T0019082.1 MGP_BALBcJ_G0015829.1 mouse_genomes_project 1 22663115 22994276 - Adgrb3 protein_coding retained_intron MGP_BALBcJ_T0005877.1 MGP_BALBcJ_G0004930.1 mouse_genomes_project 1 131049772 131056063 - Gm29630 lincRNA lincRNA MGP_BALBcJ_T0005804.1 MGP_BALBcJ_G0004870.1 mouse_genomes_project 1 88617125 88621971 - Gm28721 lincRNA lincRNA MGP_BALBcJ_T0099115.1 MGP_BALBcJ_G0037151.1 mouse_genomes_project 1 117087292 117087417 - Gm22710 snRNA snRNA MGP_BALBcJ_T0023950.1 MGP_BALBcJ_G0016834.1 mouse_genomes_project 1 182312419 182314474 - MGP_BALBcJ_P0023950 Ccdc185 protein_coding protein_coding MGP_BALBcJ_T0002772.1 MGP_BALBcJ_G0002634.1 mouse_genomes_project 1 37916866 37925911 - Gm35801 antisense antisense MGP_BALBcJ_T0002773.1 MGP_BALBcJ_G0002634.1 mouse_genomes_project 1 37916886 37925897 - Gm35801 antisense antisense MGP_BALBcJ_T0012005.1 MGP_BALBcJ_G0010102.1 mouse_genomes_project 1 47666769 47669286 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100363.1 MGP_BALBcJ_G0038399.1 mouse_genomes_project 1 95198285 95198413 + Gm26078 snoRNA snoRNA MGP_BALBcJ_T0006036.1 MGP_BALBcJ_G0005055.1 mouse_genomes_project 1 193063082 193066012 - 4631405K08Rik lincRNA lincRNA MGP_BALBcJ_T0021349.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91413476 91499568 - MGP_BALBcJ_P0021349 Kif1a protein_coding protein_coding MGP_BALBcJ_T0021350.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91415763 91499577 - MGP_BALBcJ_P0021350 Kif1a protein_coding protein_coding MGP_BALBcJ_T0021351.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91415952 91499697 - MGP_BALBcJ_P0021351 Kif1a protein_coding protein_coding MGP_BALBcJ_T0021352.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91416292 91499593 - MGP_BALBcJ_P0021352 Kif1a protein_coding protein_coding MGP_BALBcJ_T0021353.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91416469 91480060 - MGP_BALBcJ_P0021353 Kif1a protein_coding protein_coding MGP_BALBcJ_T0021354.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91420333 91422721 - MGP_BALBcJ_P0021354 Kif1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021355.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91421505 91425218 - Kif1a protein_coding retained_intron MGP_BALBcJ_T0021356.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91437054 91499592 - Kif1a protein_coding processed_transcript MGP_BALBcJ_T0021357.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91440509 91452026 - MGP_BALBcJ_P0021357 Kif1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021358.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91463770 91466397 - Kif1a protein_coding processed_transcript MGP_BALBcJ_T0021359.1 MGP_BALBcJ_G0016270.1 mouse_genomes_project 1 91475362 91499580 - MGP_BALBcJ_P0021359 Kif1a protein_coding protein_coding MGP_BALBcJ_T0012302.1 MGP_BALBcJ_G0010399.1 mouse_genomes_project 1 168580267 168580851 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000515.1 MGP_BALBcJ_G0000453.1 mouse_genomes_project 1 75158460 75162223 - TEC TEC MGP_BALBcJ_T0009455.1 MGP_BALBcJ_G0007580.1 mouse_genomes_project 1 33952681 33952756 + Gm24133 miRNA miRNA MGP_BALBcJ_T0005844.1 MGP_BALBcJ_G0004904.1 mouse_genomes_project 1 112375643 112449760 - 9330185C12Rik lincRNA lincRNA MGP_BALBcJ_T0000696.1 MGP_BALBcJ_G0000632.1 mouse_genomes_project 1 157548908 157551990 - TEC TEC MGP_BALBcJ_T0022459.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143102014 143108960 - MGP_BALBcJ_P0022459 Rgs1 protein_coding protein_coding MGP_BALBcJ_T0022460.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143102931 143108774 - Rgs1 protein_coding retained_intron MGP_BALBcJ_T0022461.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143103690 143108778 - MGP_BALBcJ_P0022461 Rgs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022462.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143104313 143108778 - MGP_BALBcJ_P0022462 Rgs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022463.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143104391 143108746 - MGP_BALBcJ_P0022463 Rgs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022464.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143104391 143108776 - MGP_BALBcJ_P0022464 Rgs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022465.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143105181 143108777 - MGP_BALBcJ_P0022465 Rgs1 protein_coding protein_coding MGP_BALBcJ_T0022466.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143107510 143108776 - Rgs1 protein_coding retained_intron MGP_BALBcJ_T0022467.1 MGP_BALBcJ_G0016510.1 mouse_genomes_project 1 143107513 143108779 - Rgs1 protein_coding retained_intron MGP_BALBcJ_T0102059.1 MGP_BALBcJ_G0039876.1 mouse_genomes_project 1 68066256 68066344 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0024160.1 MGP_BALBcJ_G0016876.1 mouse_genomes_project 1 190675241 190686957 + Batf3 protein_coding processed_transcript MGP_BALBcJ_T0024161.1 MGP_BALBcJ_G0016876.1 mouse_genomes_project 1 190675274 190687416 + Batf3 protein_coding processed_transcript MGP_BALBcJ_T0024162.1 MGP_BALBcJ_G0016876.1 mouse_genomes_project 1 190675719 190687414 + MGP_BALBcJ_P0024162 Batf3 protein_coding protein_coding MGP_BALBcJ_T0024163.1 MGP_BALBcJ_G0016876.1 mouse_genomes_project 1 190675777 190686957 + Batf3 protein_coding processed_transcript MGP_BALBcJ_T0024164.1 MGP_BALBcJ_G0016876.1 mouse_genomes_project 1 190677852 190687380 + Batf3 protein_coding retained_intron MGP_BALBcJ_T0019748.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50897590 50910310 + MGP_BALBcJ_P0019748 Osgepl1 protein_coding protein_coding MGP_BALBcJ_T0019749.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50897620 50910141 + MGP_BALBcJ_P0019749 Osgepl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019750.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50897623 50900599 + Osgepl1 protein_coding processed_transcript MGP_BALBcJ_T0019751.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50897623 50902625 + Osgepl1 protein_coding retained_intron MGP_BALBcJ_T0019752.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50897629 50908031 + MGP_BALBcJ_P0019752 Osgepl1 protein_coding protein_coding MGP_BALBcJ_T0019753.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50897639 50910134 + MGP_BALBcJ_P0019753 Osgepl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019754.1 MGP_BALBcJ_G0015958.1 mouse_genomes_project 1 50903675 50910142 + Osgepl1 protein_coding retained_intron MGP_BALBcJ_T0000718.1 MGP_BALBcJ_G0000654.1 mouse_genomes_project 1 162320837 162323111 - TEC TEC MGP_BALBcJ_T0099121.1 MGP_BALBcJ_G0037157.1 mouse_genomes_project 1 127604206 127604317 - Gm23056 snRNA snRNA MGP_BALBcJ_T0000693.1 MGP_BALBcJ_G0000629.1 mouse_genomes_project 1 156926900 157141373 + TEC TEC MGP_BALBcJ_T0000669.1 MGP_BALBcJ_G0000605.1 mouse_genomes_project 1 148379328 148381635 - TEC TEC MGP_BALBcJ_T0005674.1 MGP_BALBcJ_G0004777.1 mouse_genomes_project 1 39632039 39632438 + lincRNA lincRNA MGP_BALBcJ_T0012303.1 MGP_BALBcJ_G0010400.1 mouse_genomes_project 1 168584502 168585658 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005947.1 MGP_BALBcJ_G0004986.1 mouse_genomes_project 1 163654172 163678593 - lincRNA lincRNA MGP_BALBcJ_T0012177.1 MGP_BALBcJ_G0010274.1 mouse_genomes_project 1 116866787 116867950 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023975.1 MGP_BALBcJ_G0016839.1 mouse_genomes_project 1 182827264 182829196 + protein_coding retained_intron MGP_BALBcJ_T0023976.1 MGP_BALBcJ_G0016839.1 mouse_genomes_project 1 182828001 182834624 + protein_coding processed_transcript MGP_BALBcJ_T0023977.1 MGP_BALBcJ_G0016839.1 mouse_genomes_project 1 182828193 182855991 + MGP_BALBcJ_P0023977 protein_coding protein_coding MGP_BALBcJ_T0023978.1 MGP_BALBcJ_G0016839.1 mouse_genomes_project 1 182828244 182848730 + MGP_BALBcJ_P0023978 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023979.1 MGP_BALBcJ_G0016839.1 mouse_genomes_project 1 182834541 182852101 + protein_coding retained_intron MGP_BALBcJ_T0023980.1 MGP_BALBcJ_G0016839.1 mouse_genomes_project 1 182836340 182849024 + protein_coding retained_intron MGP_BALBcJ_T0011985.1 MGP_BALBcJ_G0010082.1 mouse_genomes_project 1 43075145 43076295 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002959.1 MGP_BALBcJ_G0002778.1 mouse_genomes_project 1 186513751 186516827 - Gm37912 antisense antisense MGP_BALBcJ_T0020853.1 MGP_BALBcJ_G0016159.1 mouse_genomes_project 1 81133587 81159341 - MGP_BALBcJ_P0020853 Slc19a3 protein_coding protein_coding MGP_BALBcJ_T0020854.1 MGP_BALBcJ_G0016159.1 mouse_genomes_project 1 81133588 81141465 - Slc19a3 protein_coding processed_transcript MGP_BALBcJ_T0020855.1 MGP_BALBcJ_G0016159.1 mouse_genomes_project 1 81134864 81159324 - MGP_BALBcJ_P0020855 Slc19a3 protein_coding protein_coding MGP_BALBcJ_T0018890.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11187365 11328228 - MGP_BALBcJ_P0018890 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018891.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11187369 11328263 - MGP_BALBcJ_P0018891 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018892.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11188077 11328147 - MGP_BALBcJ_P0018892 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018893.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11189054 11322576 - MGP_BALBcJ_P0018893 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018894.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11226349 11249439 - MGP_BALBcJ_P0018894 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018895.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11271373 11322625 - MGP_BALBcJ_P0018895 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018896.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11289028 11322634 - MGP_BALBcJ_P0018896 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018897.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11289096 11327864 - MGP_BALBcJ_P0018897 Eya1 protein_coding protein_coding MGP_BALBcJ_T0018898.1 MGP_BALBcJ_G0015783.1 mouse_genomes_project 1 11319216 11328079 - Eya1 protein_coding retained_intron MGP_BALBcJ_T0002766.1 MGP_BALBcJ_G0002629.1 mouse_genomes_project 1 35616357 35620386 + Gm16151 antisense antisense MGP_BALBcJ_T0022264.1 MGP_BALBcJ_G0016470.1 mouse_genomes_project 1 134590581 134593599 + MGP_BALBcJ_P0022264 Phlda3 protein_coding protein_coding MGP_BALBcJ_T0022265.1 MGP_BALBcJ_G0016470.1 mouse_genomes_project 1 134591596 134593385 + Phlda3 protein_coding processed_transcript MGP_BALBcJ_T0000640.1 MGP_BALBcJ_G0000577.1 mouse_genomes_project 1 136754893 136758761 + TEC TEC MGP_BALBcJ_T0005875.1 MGP_BALBcJ_G0004928.1 mouse_genomes_project 1 130799242 130832939 + Gm26892 lincRNA lincRNA MGP_BALBcJ_T0000788.1 MGP_BALBcJ_G0000722.1 mouse_genomes_project 1 191187086 191187715 + TEC TEC MGP_BALBcJ_T0016981.1 MGP_BALBcJ_G0015046.1 mouse_genomes_project 1 130724702 130776711 + Gm29103 processed_transcript processed_transcript MGP_BALBcJ_T0002788.1 MGP_BALBcJ_G0002647.1 mouse_genomes_project 1 56109633 56181255 - Gm15759 antisense antisense MGP_BALBcJ_T0011846.1 MGP_BALBcJ_G0009943.1 mouse_genomes_project 1 4036083 4036408 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023288.1 MGP_BALBcJ_G0016673.1 mouse_genomes_project 1 169651690 169690728 + MGP_BALBcJ_P0023288 Olfml2b protein_coding protein_coding MGP_BALBcJ_T0098429.1 MGP_BALBcJ_G0036483.1 mouse_genomes_project 1 103349897 103350009 - n-R5s216 rRNA rRNA MGP_BALBcJ_T0099130.1 MGP_BALBcJ_G0037166.1 mouse_genomes_project 1 138620642 138620746 + Gm25619 snRNA snRNA MGP_BALBcJ_T0019598.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42615030 42628722 + Col3a1 protein_coding retained_intron MGP_BALBcJ_T0019599.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42615030 42654925 + MGP_BALBcJ_P0019599 Col3a1 protein_coding protein_coding MGP_BALBcJ_T0019600.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42615139 42620472 + Col3a1 protein_coding processed_transcript MGP_BALBcJ_T0019601.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42631959 42633265 + Col3a1 protein_coding retained_intron MGP_BALBcJ_T0019602.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42638761 42641859 + Col3a1 protein_coding retained_intron MGP_BALBcJ_T0019603.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42640327 42645614 + MGP_BALBcJ_P0019603 Col3a1 protein_coding protein_coding MGP_BALBcJ_T0019604.1 MGP_BALBcJ_G0015930.1 mouse_genomes_project 1 42644897 42652985 + MGP_BALBcJ_P0019604 Col3a1 protein_coding protein_coding MGP_BALBcJ_T0012291.1 MGP_BALBcJ_G0010388.1 mouse_genomes_project 1 164618512 164619344 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021713.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119948894 119973339 - MGP_BALBcJ_P0021713 Insig2 protein_coding protein_coding MGP_BALBcJ_T0021714.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119950440 119951866 - Insig2 protein_coding retained_intron MGP_BALBcJ_T0021715.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119950471 119973352 - MGP_BALBcJ_P0021715 Insig2 protein_coding protein_coding MGP_BALBcJ_T0021716.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119951427 119957682 - Insig2 protein_coding retained_intron MGP_BALBcJ_T0021717.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119951484 119973324 - MGP_BALBcJ_P0021717 Insig2 protein_coding protein_coding MGP_BALBcJ_T0021718.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119951784 119968459 - MGP_BALBcJ_P0021718 Insig2 protein_coding protein_coding MGP_BALBcJ_T0021719.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119957112 119964996 - Insig2 protein_coding retained_intron MGP_BALBcJ_T0021720.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119964931 119973241 - MGP_BALBcJ_P0021720 Insig2 protein_coding protein_coding MGP_BALBcJ_T0021721.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119965001 119973247 - MGP_BALBcJ_P0021721 Insig2 protein_coding protein_coding MGP_BALBcJ_T0021722.1 MGP_BALBcJ_G0016352.1 mouse_genomes_project 1 119965028 119978108 - MGP_BALBcJ_P0021722 Insig2 protein_coding protein_coding MGP_BALBcJ_T0019826.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53112302 53165478 - MGP_BALBcJ_P0019826 Boll protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019827.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53132630 53223689 - MGP_BALBcJ_P0019827 Boll protein_coding protein_coding MGP_BALBcJ_T0019828.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53165368 53226271 - MGP_BALBcJ_P0019828 Boll protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019829.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53165368 53225678 - MGP_BALBcJ_P0019829 Boll protein_coding protein_coding MGP_BALBcJ_T0019830.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53165368 53226271 - MGP_BALBcJ_P0019830 Boll protein_coding protein_coding MGP_BALBcJ_T0019831.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53209479 53226421 - MGP_BALBcJ_P0019831 Boll protein_coding protein_coding MGP_BALBcJ_T0019832.1 MGP_BALBcJ_G0015973.1 mouse_genomes_project 1 53212155 53223689 - Boll protein_coding processed_transcript MGP_BALBcJ_T0009503.1 MGP_BALBcJ_G0007628.1 mouse_genomes_project 1 117584618 117584699 + Mir6346 miRNA miRNA MGP_BALBcJ_T0000541.1 MGP_BALBcJ_G0000479.1 mouse_genomes_project 1 84774502 84776756 + TEC TEC MGP_BALBcJ_T0002751.1 MGP_BALBcJ_G0002617.1 mouse_genomes_project 1 28387006 28401071 + Gm29128 antisense antisense MGP_BALBcJ_T0002865.1 MGP_BALBcJ_G0002703.1 mouse_genomes_project 1 130040167 130043583 + Gm28913 antisense antisense MGP_BALBcJ_T0002935.1 MGP_BALBcJ_G0002757.1 mouse_genomes_project 1 171022882 171031985 - Gm37065 antisense antisense MGP_BALBcJ_T0099145.1 MGP_BALBcJ_G0037181.1 mouse_genomes_project 1 170046484 170046648 + Gm26110 snRNA snRNA MGP_BALBcJ_T0019577.1 MGP_BALBcJ_G0015926.1 mouse_genomes_project 1 41504582 41512186 + MGP_BALBcJ_P0019577 Bivm protein_coding protein_coding MGP_BALBcJ_T0019578.1 MGP_BALBcJ_G0015926.1 mouse_genomes_project 1 41504625 41511949 + Bivm protein_coding processed_transcript MGP_BALBcJ_T0019579.1 MGP_BALBcJ_G0015926.1 mouse_genomes_project 1 41504787 41530352 + MGP_BALBcJ_P0019579 Bivm protein_coding protein_coding MGP_BALBcJ_T0019580.1 MGP_BALBcJ_G0015926.1 mouse_genomes_project 1 41505133 41511967 + Bivm protein_coding processed_transcript MGP_BALBcJ_T0019581.1 MGP_BALBcJ_G0015926.1 mouse_genomes_project 1 41505587 41530612 + MGP_BALBcJ_P0019581 Bivm protein_coding protein_coding MGP_BALBcJ_T0019582.1 MGP_BALBcJ_G0015926.1 mouse_genomes_project 1 41505598 41512027 + MGP_BALBcJ_P0019582 Bivm protein_coding protein_coding MGP_BALBcJ_T0019866.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55810283 55825267 - MGP_BALBcJ_P0019866 Kctd18 protein_coding protein_coding MGP_BALBcJ_T0019867.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55810430 55825311 - MGP_BALBcJ_P0019867 Kctd18 protein_coding protein_coding MGP_BALBcJ_T0019868.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55810435 55824707 - MGP_BALBcJ_P0019868 Kctd18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019869.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55811254 55874860 - MGP_BALBcJ_P0019869 Kctd18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019870.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55811762 55825231 - MGP_BALBcJ_P0019870 Kctd18 protein_coding protein_coding MGP_BALBcJ_T0019871.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55811874 55818630 - Kctd18 protein_coding retained_intron MGP_BALBcJ_T0019872.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55811902 55817285 - Kctd18 protein_coding retained_intron MGP_BALBcJ_T0019873.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55815236 55825235 - Kctd18 protein_coding retained_intron MGP_BALBcJ_T0019874.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55816340 55818164 - Kctd18 protein_coding retained_intron MGP_BALBcJ_T0019875.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55818748 55825262 - Kctd18 protein_coding retained_intron MGP_BALBcJ_T0019876.1 MGP_BALBcJ_G0015981.1 mouse_genomes_project 1 55818784 55825262 - Kctd18 protein_coding retained_intron MGP_BALBcJ_T0022949.1 MGP_BALBcJ_G0016594.1 mouse_genomes_project 1 160434304 160456891 + MGP_BALBcJ_P0022949 Tnfsf4 protein_coding protein_coding MGP_BALBcJ_T0002724.1 MGP_BALBcJ_G0002600.1 mouse_genomes_project 1 500237 546438 + Gm1992 antisense antisense MGP_BALBcJ_T0102065.1 MGP_BALBcJ_G0039882.1 mouse_genomes_project 1 86387547 86387761 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012343.1 MGP_BALBcJ_G0010440.1 mouse_genomes_project 1 190989162 190989744 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102069.1 MGP_BALBcJ_G0039886.1 mouse_genomes_project 1 90955073 90955256 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016961.1 MGP_BALBcJ_G0015038.1 mouse_genomes_project 1 72894977 72924011 + Gm16582 processed_transcript processed_transcript MGP_BALBcJ_T0012289.1 MGP_BALBcJ_G0010386.1 mouse_genomes_project 1 163499423 163499739 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005756.1 MGP_BALBcJ_G0004832.1 mouse_genomes_project 1 71309607 71346862 + Gm29185 lincRNA lincRNA MGP_BALBcJ_T0022224.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134070664 134091975 - MGP_BALBcJ_P0022224 Rnpep protein_coding protein_coding MGP_BALBcJ_T0022225.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134070664 134091975 - MGP_BALBcJ_P0022225 Rnpep protein_coding protein_coding MGP_BALBcJ_T0022226.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134073146 134075355 - Rnpep protein_coding retained_intron MGP_BALBcJ_T0022227.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134074983 134079589 - Rnpep protein_coding processed_transcript MGP_BALBcJ_T0022228.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134079500 134082658 - Rnpep protein_coding processed_transcript MGP_BALBcJ_T0022229.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134079502 134080884 - Rnpep protein_coding retained_intron MGP_BALBcJ_T0022230.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134083753 134085309 - Rnpep protein_coding retained_intron MGP_BALBcJ_T0022231.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134085239 134087003 - Rnpep protein_coding retained_intron MGP_BALBcJ_T0022232.1 MGP_BALBcJ_G0016463.1 mouse_genomes_project 1 134085532 134087806 - Rnpep protein_coding retained_intron MGP_BALBcJ_T0000631.1 MGP_BALBcJ_G0000568.1 mouse_genomes_project 1 133622445 133630079 - TEC TEC MGP_BALBcJ_T0005964.1 MGP_BALBcJ_G0004999.1 mouse_genomes_project 1 168322041 168344304 - Gm37839 lincRNA lincRNA MGP_BALBcJ_T0002896.1 MGP_BALBcJ_G0002726.1 mouse_genomes_project 1 152690100 152692358 - Gm29529 antisense antisense MGP_BALBcJ_T0018660.1 MGP_BALBcJ_G0015745.1 mouse_genomes_project 1 1047396 1185100 - MGP_BALBcJ_P0018660 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0002972.1 MGP_BALBcJ_G0002789.1 mouse_genomes_project 1 190655115 190655971 - Gm38188 antisense antisense MGP_BALBcJ_T0012279.1 MGP_BALBcJ_G0010376.1 mouse_genomes_project 1 158456248 158456458 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000797.1 MGP_BALBcJ_G0000730.1 mouse_genomes_project 1 194229726 194231560 + TEC TEC MGP_BALBcJ_T0005976.1 MGP_BALBcJ_G0005011.1 mouse_genomes_project 1 179701282 179711743 - Gm37336 lincRNA lincRNA MGP_BALBcJ_T0005977.1 MGP_BALBcJ_G0005011.1 mouse_genomes_project 1 179711340 179711808 - Gm37336 lincRNA lincRNA MGP_BALBcJ_T0005972.1 MGP_BALBcJ_G0005007.1 mouse_genomes_project 1 175742885 175840551 - lincRNA lincRNA MGP_BALBcJ_T0099073.1 MGP_BALBcJ_G0037109.1 mouse_genomes_project 1 17514517 17514619 - Gm24162 snRNA snRNA MGP_BALBcJ_T0000543.1 MGP_BALBcJ_G0000481.1 mouse_genomes_project 1 84973477 84976432 + TEC TEC MGP_BALBcJ_T0005822.1 MGP_BALBcJ_G0004887.1 mouse_genomes_project 1 94423642 94455816 - 1700063A18Rik lincRNA lincRNA MGP_BALBcJ_T0023187.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259939 165322259 + MGP_BALBcJ_P0023187 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023188.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259993 165316706 + MGP_BALBcJ_P0023188 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023189.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259993 165316706 + MGP_BALBcJ_P0023189 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023190.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259993 165316706 + MGP_BALBcJ_P0023190 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023191.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259993 165316706 + MGP_BALBcJ_P0023191 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023192.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259993 165316706 + MGP_BALBcJ_P0023192 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023193.1 MGP_BALBcJ_G0016645.1 mouse_genomes_project 1 165259993 165316706 + MGP_BALBcJ_P0023193 Ildr2 protein_coding protein_coding MGP_BALBcJ_T0023161.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164875743 165014753 - MGP_BALBcJ_P0023161 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023162.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164875743 164945970 - MGP_BALBcJ_P0023162 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023163.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886012 164924325 - MGP_BALBcJ_P0023163 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023164.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886081 165014693 - MGP_BALBcJ_P0023164 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023165.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886081 165014697 - MGP_BALBcJ_P0023165 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023166.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886081 165014684 - MGP_BALBcJ_P0023166 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023167.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886085 164945970 - MGP_BALBcJ_P0023167 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023168.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886112 164890785 - MGP_BALBcJ_P0023168 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023169.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886208 164903161 - Pou2f1 protein_coding retained_intron MGP_BALBcJ_T0023170.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886232 165014704 - MGP_BALBcJ_P0023170 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023171.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886306 164945922 - MGP_BALBcJ_P0023171 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023172.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164886362 164942741 - MGP_BALBcJ_P0023172 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023173.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164890551 164946033 - Pou2f1 protein_coding retained_intron MGP_BALBcJ_T0023174.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164890706 164945961 - Pou2f1 protein_coding retained_intron MGP_BALBcJ_T0023175.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164901832 165014690 - Pou2f1 protein_coding retained_intron MGP_BALBcJ_T0023176.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164922364 165014688 - MGP_BALBcJ_P0023176 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0023177.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164940678 165014704 - Pou2f1 protein_coding retained_intron MGP_BALBcJ_T0023178.1 MGP_BALBcJ_G0016641.1 mouse_genomes_project 1 164942720 165014684 - MGP_BALBcJ_P0023178 Pou2f1 protein_coding protein_coding MGP_BALBcJ_T0000660.1 MGP_BALBcJ_G0000596.1 mouse_genomes_project 1 141674742 141674876 + TEC TEC MGP_BALBcJ_T0002939.1 MGP_BALBcJ_G0002761.1 mouse_genomes_project 1 171435552 171436220 + Gm36937 antisense antisense MGP_BALBcJ_T0012000.1 MGP_BALBcJ_G0010097.1 mouse_genomes_project 1 46714604 46714819 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005996.1 MGP_BALBcJ_G0005025.1 mouse_genomes_project 1 183230503 183296046 + Gm34068 lincRNA lincRNA MGP_BALBcJ_T0005673.1 MGP_BALBcJ_G0004776.1 mouse_genomes_project 1 39607698 39608161 - Gm29664 lincRNA lincRNA MGP_BALBcJ_T0000397.1 MGP_BALBcJ_G0000336.1 mouse_genomes_project 1 21235326 21238132 + TEC TEC MGP_BALBcJ_T0012301.1 MGP_BALBcJ_G0010398.1 mouse_genomes_project 1 168445199 168445541 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023628.1 MGP_BALBcJ_G0016767.1 mouse_genomes_project 1 173711590 173712600 + MGP_BALBcJ_P0023628 Olfr248 protein_coding protein_coding MGP_BALBcJ_T0012332.1 MGP_BALBcJ_G0010429.1 mouse_genomes_project 1 182902687 182903079 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000636.1 MGP_BALBcJ_G0000573.1 mouse_genomes_project 1 136114013 136115929 + TEC TEC MGP_BALBcJ_T0012087.1 MGP_BALBcJ_G0010184.1 mouse_genomes_project 1 78130176 78130440 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100380.1 MGP_BALBcJ_G0038416.1 mouse_genomes_project 1 132392813 132392946 + Gm23939 snoRNA snoRNA MGP_BALBcJ_T0100387.1 MGP_BALBcJ_G0038423.1 mouse_genomes_project 1 147288338 147288467 - Gm22966 snoRNA snoRNA MGP_BALBcJ_T0011952.1 MGP_BALBcJ_G0010049.1 mouse_genomes_project 1 32197344 32199481 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021367.1 MGP_BALBcJ_G0016274.1 mouse_genomes_project 1 91631736 91700566 + MGP_BALBcJ_P0021367 Sned1 protein_coding protein_coding MGP_BALBcJ_T0021368.1 MGP_BALBcJ_G0016274.1 mouse_genomes_project 1 91631746 91682195 + Sned1 protein_coding retained_intron MGP_BALBcJ_T0021369.1 MGP_BALBcJ_G0016274.1 mouse_genomes_project 1 91672122 91680004 + Sned1 protein_coding processed_transcript MGP_BALBcJ_T0021370.1 MGP_BALBcJ_G0016274.1 mouse_genomes_project 1 91678923 91695281 + MGP_BALBcJ_P0021370 Sned1 protein_coding protein_coding MGP_BALBcJ_T0021371.1 MGP_BALBcJ_G0016274.1 mouse_genomes_project 1 91684530 91695970 + Sned1 protein_coding retained_intron MGP_BALBcJ_T0021372.1 MGP_BALBcJ_G0016274.1 mouse_genomes_project 1 91695188 91696092 + Sned1 protein_coding retained_intron MGP_BALBcJ_T0012006.1 MGP_BALBcJ_G0010103.1 mouse_genomes_project 1 47793063 47793789 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022995.1 MGP_BALBcJ_G0016604.1 mouse_genomes_project 1 161683676 161693506 - 7420461P10Rik protein_coding processed_transcript MGP_BALBcJ_T0022996.1 MGP_BALBcJ_G0016604.1 mouse_genomes_project 1 161683676 161694771 - MGP_BALBcJ_P0022996 7420461P10Rik protein_coding protein_coding MGP_BALBcJ_T0022997.1 MGP_BALBcJ_G0016604.1 mouse_genomes_project 1 161683686 161694884 - MGP_BALBcJ_P0022997 7420461P10Rik protein_coding protein_coding MGP_BALBcJ_T0021940.1 MGP_BALBcJ_G0016401.1 mouse_genomes_project 1 130501652 130529398 + MGP_BALBcJ_P0021940 Slc26a9 protein_coding protein_coding MGP_BALBcJ_T0021941.1 MGP_BALBcJ_G0016401.1 mouse_genomes_project 1 130501668 130521518 + MGP_BALBcJ_P0021941 Slc26a9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021942.1 MGP_BALBcJ_G0016401.1 mouse_genomes_project 1 130508076 130508781 + Slc26a9 protein_coding retained_intron MGP_BALBcJ_T0021943.1 MGP_BALBcJ_G0016401.1 mouse_genomes_project 1 130508184 130511676 + MGP_BALBcJ_P0021943 Slc26a9 protein_coding protein_coding MGP_BALBcJ_T0023699.1 MGP_BALBcJ_G0016782.1 mouse_genomes_project 1 176115266 176251037 + Sdccag8 protein_coding retained_intron MGP_BALBcJ_T0023700.1 MGP_BALBcJ_G0016782.1 mouse_genomes_project 1 176115266 176146674 + Sdccag8 protein_coding retained_intron MGP_BALBcJ_T0023701.1 MGP_BALBcJ_G0016782.1 mouse_genomes_project 1 176115266 176157760 + MGP_BALBcJ_P0023701 Sdccag8 protein_coding protein_coding MGP_BALBcJ_T0023702.1 MGP_BALBcJ_G0016782.1 mouse_genomes_project 1 176115266 176315590 + MGP_BALBcJ_P0023702 Sdccag8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023703.1 MGP_BALBcJ_G0016782.1 mouse_genomes_project 1 176115266 176315590 + MGP_BALBcJ_P0023703 Sdccag8 protein_coding protein_coding MGP_BALBcJ_T0023704.1 MGP_BALBcJ_G0016782.1 mouse_genomes_project 1 176293247 176315590 + Sdccag8 protein_coding processed_transcript MGP_BALBcJ_T0018910.1 MGP_BALBcJ_G0015788.1 mouse_genomes_project 1 12912215 12948802 - MGP_BALBcJ_P0018910 Sbspon protein_coding protein_coding MGP_BALBcJ_T0102070.1 MGP_BALBcJ_G0039887.1 mouse_genomes_project 1 90970214 90970260 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0021137.1 MGP_BALBcJ_G0016221.1 mouse_genomes_project 1 86574693 86591304 - MGP_BALBcJ_P0021137 Hjurp protein_coding protein_coding MGP_BALBcJ_T0021138.1 MGP_BALBcJ_G0016221.1 mouse_genomes_project 1 86577007 86591228 - MGP_BALBcJ_P0021138 Hjurp protein_coding protein_coding MGP_BALBcJ_T0021139.1 MGP_BALBcJ_G0016221.1 mouse_genomes_project 1 86578148 86591249 - MGP_BALBcJ_P0021139 Hjurp protein_coding protein_coding MGP_BALBcJ_T0021140.1 MGP_BALBcJ_G0016221.1 mouse_genomes_project 1 86578596 86582380 - MGP_BALBcJ_P0021140 Hjurp protein_coding protein_coding MGP_BALBcJ_T0021141.1 MGP_BALBcJ_G0016221.1 mouse_genomes_project 1 86582324 86586180 - Hjurp protein_coding retained_intron MGP_BALBcJ_T0021142.1 MGP_BALBcJ_G0016221.1 mouse_genomes_project 1 86582365 86584079 - Hjurp protein_coding retained_intron MGP_BALBcJ_T0100355.1 MGP_BALBcJ_G0038391.1 mouse_genomes_project 1 77532421 77532547 - Gm24160 snoRNA snoRNA MGP_BALBcJ_T0002906.1 MGP_BALBcJ_G0002736.1 mouse_genomes_project 1 160055690 160056603 + Gm37362 antisense antisense MGP_BALBcJ_T0021130.1 MGP_BALBcJ_G0016216.1 mouse_genomes_project 1 86366635 86472410 + MGP_BALBcJ_P0021130 protein_coding protein_coding MGP_BALBcJ_T0021131.1 MGP_BALBcJ_G0016216.1 mouse_genomes_project 1 86371955 86472410 + MGP_BALBcJ_P0021131 protein_coding protein_coding MGP_BALBcJ_T0002986.1 MGP_BALBcJ_G0002797.1 mouse_genomes_project 1 192749577 192771046 + 4930570N18Rik antisense antisense MGP_BALBcJ_T0020960.1 MGP_BALBcJ_G0016181.1 mouse_genomes_project 1 84255326 84284666 + MGP_BALBcJ_P0020960 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023623.1 MGP_BALBcJ_G0016763.1 mouse_genomes_project 1 173426702 173427748 + MGP_BALBcJ_P0023623 Olfr420 protein_coding protein_coding MGP_BALBcJ_T0019855.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628151 55740001 + MGP_BALBcJ_P0019855 Spats2l protein_coding protein_coding MGP_BALBcJ_T0019856.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628238 55733957 + Spats2l protein_coding retained_intron MGP_BALBcJ_T0019857.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628290 55756342 + MGP_BALBcJ_P0019857 Spats2l protein_coding protein_coding MGP_BALBcJ_T0019858.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628408 55654450 + Spats2l protein_coding retained_intron MGP_BALBcJ_T0019859.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628589 55740069 + MGP_BALBcJ_P0019859 Spats2l protein_coding protein_coding MGP_BALBcJ_T0019860.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628733 55792362 + MGP_BALBcJ_P0019860 Spats2l protein_coding protein_coding MGP_BALBcJ_T0019861.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628879 55711530 + Spats2l protein_coding retained_intron MGP_BALBcJ_T0019862.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628901 55686403 + Spats2l protein_coding retained_intron MGP_BALBcJ_T0019863.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55628906 55653592 + Spats2l protein_coding retained_intron MGP_BALBcJ_T0019864.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55651683 55801646 + MGP_BALBcJ_P0019864 Spats2l protein_coding protein_coding MGP_BALBcJ_T0019865.1 MGP_BALBcJ_G0015980.1 mouse_genomes_project 1 55756303 55795629 + Spats2l protein_coding retained_intron MGP_BALBcJ_T0000365.1 MGP_BALBcJ_G0000306.1 mouse_genomes_project 1 7262448 7264170 - TEC TEC MGP_BALBcJ_T0020179.1 MGP_BALBcJ_G0016034.1 mouse_genomes_project 1 62596387 62607157 - MGP_BALBcJ_P0020179 Mettl21a protein_coding protein_coding MGP_BALBcJ_T0020180.1 MGP_BALBcJ_G0016034.1 mouse_genomes_project 1 62596394 62607083 - MGP_BALBcJ_P0020180 Mettl21a protein_coding protein_coding MGP_BALBcJ_T0020181.1 MGP_BALBcJ_G0016034.1 mouse_genomes_project 1 62597870 62605546 - Mettl21a protein_coding processed_transcript MGP_BALBcJ_T0020182.1 MGP_BALBcJ_G0016034.1 mouse_genomes_project 1 62604118 62607099 - Mettl21a protein_coding processed_transcript MGP_BALBcJ_T0005980.1 MGP_BALBcJ_G0005014.1 mouse_genomes_project 1 180311690 180318194 + Gm17275 lincRNA lincRNA MGP_BALBcJ_T0100386.1 MGP_BALBcJ_G0038422.1 mouse_genomes_project 1 144153626 144153753 - Gm25460 snoRNA snoRNA MGP_BALBcJ_T0009482.1 MGP_BALBcJ_G0007607.1 mouse_genomes_project 1 80173372 80173476 + Mir6344 miRNA miRNA MGP_BALBcJ_T0000697.1 MGP_BALBcJ_G0000633.1 mouse_genomes_project 1 158261605 158264493 + TEC TEC MGP_BALBcJ_T0017039.1 MGP_BALBcJ_G0015059.1 mouse_genomes_project 1 164791643 164799936 + Gm16565 processed_transcript sense_overlapping MGP_BALBcJ_T0017040.1 MGP_BALBcJ_G0015059.1 mouse_genomes_project 1 164791767 164792736 + Gm16565 processed_transcript processed_transcript MGP_BALBcJ_T0099080.1 MGP_BALBcJ_G0037116.1 mouse_genomes_project 1 30530420 30530520 + Gm25792 snRNA snRNA MGP_BALBcJ_T0002908.1 MGP_BALBcJ_G0002738.1 mouse_genomes_project 1 160185501 160190237 - 4930469G21Rik antisense antisense MGP_BALBcJ_T0002909.1 MGP_BALBcJ_G0002738.1 mouse_genomes_project 1 160187791 160190237 - 4930469G21Rik antisense antisense MGP_BALBcJ_T0012018.1 MGP_BALBcJ_G0010115.1 mouse_genomes_project 1 52418389 52418967 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002694.1 MGP_BALBcJ_G0002570.1 mouse_genomes_project 1 168183202 168183755 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0000637.1 MGP_BALBcJ_G0000574.1 mouse_genomes_project 1 136189161 136189570 - TEC TEC MGP_BALBcJ_T0021466.1 MGP_BALBcJ_G0016293.1 mouse_genomes_project 1 92509590 92524432 - MGP_BALBcJ_P0021466 Pdcd1 protein_coding protein_coding MGP_BALBcJ_T0012058.1 MGP_BALBcJ_G0010155.1 mouse_genomes_project 1 63429912 63430234 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000434.1 MGP_BALBcJ_G0000372.1 mouse_genomes_project 1 31485412 31487637 + TEC TEC MGP_BALBcJ_T0005857.1 MGP_BALBcJ_G0004914.1 mouse_genomes_project 1 119466742 119485885 + Gm29345 lincRNA lincRNA MGP_BALBcJ_T0020522.1 MGP_BALBcJ_G0016103.1 mouse_genomes_project 1 72925531 72929434 - MGP_BALBcJ_P0020522 Fev protein_coding protein_coding MGP_BALBcJ_T0020523.1 MGP_BALBcJ_G0016103.1 mouse_genomes_project 1 72926028 72929337 - MGP_BALBcJ_P0020523 Fev protein_coding protein_coding MGP_BALBcJ_T0020524.1 MGP_BALBcJ_G0016103.1 mouse_genomes_project 1 72926429 72928622 - Fev protein_coding retained_intron MGP_BALBcJ_T0022110.1 MGP_BALBcJ_G0016435.1 mouse_genomes_project 1 132472759 132483706 - MGP_BALBcJ_P0022110 Lax1 protein_coding protein_coding MGP_BALBcJ_T0022111.1 MGP_BALBcJ_G0016435.1 mouse_genomes_project 1 132474129 132483684 - MGP_BALBcJ_P0022111 Lax1 protein_coding protein_coding MGP_BALBcJ_T0012320.1 MGP_BALBcJ_G0010417.1 mouse_genomes_project 1 178250326 178250800 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018920.1 MGP_BALBcJ_G0015791.1 mouse_genomes_project 1 13153778 13182932 + MGP_BALBcJ_P0018920 Rdh10 protein_coding protein_coding MGP_BALBcJ_T0018921.1 MGP_BALBcJ_G0015791.1 mouse_genomes_project 1 13179598 13181643 + Rdh10 protein_coding retained_intron MGP_BALBcJ_T0022237.1 MGP_BALBcJ_G0016466.1 mouse_genomes_project 1 134188148 134192329 - MGP_BALBcJ_P0022237 Shisa4 protein_coding protein_coding MGP_BALBcJ_T0022238.1 MGP_BALBcJ_G0016466.1 mouse_genomes_project 1 134188151 134190542 - Shisa4 protein_coding retained_intron MGP_BALBcJ_T0022239.1 MGP_BALBcJ_G0016466.1 mouse_genomes_project 1 134190979 134192169 - Shisa4 protein_coding retained_intron MGP_BALBcJ_T0000436.1 MGP_BALBcJ_G0000374.1 mouse_genomes_project 1 32095376 32098412 + TEC TEC MGP_BALBcJ_T0018738.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4127414 4214211 + MGP_BALBcJ_P0018738 Pcmtd1 protein_coding protein_coding MGP_BALBcJ_T0018739.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4127470 4201493 + Pcmtd1 protein_coding processed_transcript MGP_BALBcJ_T0018740.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4127532 4212703 + Pcmtd1 protein_coding processed_transcript MGP_BALBcJ_T0018741.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4188221 4210657 + MGP_BALBcJ_P0018741 Pcmtd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018742.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4195457 4203962 + Pcmtd1 protein_coding retained_intron MGP_BALBcJ_T0018743.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4200675 4213199 + Pcmtd1 protein_coding retained_intron MGP_BALBcJ_T0018744.1 MGP_BALBcJ_G0015759.1 mouse_genomes_project 1 4201147 4213240 + Pcmtd1 protein_coding retained_intron MGP_BALBcJ_T0012016.1 MGP_BALBcJ_G0010113.1 mouse_genomes_project 1 50965186 50965509 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011912.1 MGP_BALBcJ_G0010009.1 mouse_genomes_project 1 22168473 22169486 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098440.1 MGP_BALBcJ_G0036494.1 mouse_genomes_project 1 185661583 185661689 + Gm23821 rRNA rRNA MGP_BALBcJ_T0023459.1 MGP_BALBcJ_G0016710.1 mouse_genomes_project 1 170886714 170927486 + MGP_BALBcJ_P0023459 Slamf1 protein_coding protein_coding MGP_BALBcJ_T0023460.1 MGP_BALBcJ_G0016710.1 mouse_genomes_project 1 170886742 170922140 + Slamf1 protein_coding retained_intron MGP_BALBcJ_T0002776.1 MGP_BALBcJ_G0002637.1 mouse_genomes_project 1 40436976 40437844 + Gm28782 antisense antisense MGP_BALBcJ_T0002857.1 MGP_BALBcJ_G0002697.1 mouse_genomes_project 1 126665152 126673078 + Gm28800 antisense antisense MGP_BALBcJ_T0011992.1 MGP_BALBcJ_G0010089.1 mouse_genomes_project 1 44483618 44483915 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022574.1 MGP_BALBcJ_G0016530.1 mouse_genomes_project 1 151517706 151765595 - MGP_BALBcJ_P0022574 Rgl1 protein_coding protein_coding MGP_BALBcJ_T0022575.1 MGP_BALBcJ_G0016530.1 mouse_genomes_project 1 151517897 151626368 - MGP_BALBcJ_P0022575 Rgl1 protein_coding protein_coding MGP_BALBcJ_T0022576.1 MGP_BALBcJ_G0016530.1 mouse_genomes_project 1 151519721 151765641 - MGP_BALBcJ_P0022576 Rgl1 protein_coding protein_coding MGP_BALBcJ_T0022577.1 MGP_BALBcJ_G0016530.1 mouse_genomes_project 1 151552609 151554146 - Rgl1 protein_coding retained_intron MGP_BALBcJ_T0022578.1 MGP_BALBcJ_G0016530.1 mouse_genomes_project 1 151558644 151593935 - Rgl1 protein_coding processed_transcript MGP_BALBcJ_T0022579.1 MGP_BALBcJ_G0016530.1 mouse_genomes_project 1 151558644 151626180 - MGP_BALBcJ_P0022579 Rgl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099110.1 MGP_BALBcJ_G0037146.1 mouse_genomes_project 1 95051314 95051421 + Gm26245 snRNA snRNA MGP_BALBcJ_T0012250.1 MGP_BALBcJ_G0010347.1 mouse_genomes_project 1 147928091 147932064 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019297.1 MGP_BALBcJ_G0015870.1 mouse_genomes_project 1 34053790 34071980 + MGP_BALBcJ_P0019297 protein_coding unknown_likely_coding MGP_BALBcJ_T0019298.1 MGP_BALBcJ_G0015870.1 mouse_genomes_project 1 34056159 34060243 + MGP_BALBcJ_P0019298 protein_coding protein_coding MGP_BALBcJ_T0019299.1 MGP_BALBcJ_G0015870.1 mouse_genomes_project 1 34060167 34061551 + protein_coding retained_intron MGP_BALBcJ_T0019300.1 MGP_BALBcJ_G0015870.1 mouse_genomes_project 1 34068466 34072211 + protein_coding retained_intron MGP_BALBcJ_T0022204.1 MGP_BALBcJ_G0016457.1 mouse_genomes_project 1 133766629 133778299 + MGP_BALBcJ_P0022204 Ube2t protein_coding unknown_likely_coding MGP_BALBcJ_T0022205.1 MGP_BALBcJ_G0016457.1 mouse_genomes_project 1 133766727 133778293 + MGP_BALBcJ_P0022205 Ube2t protein_coding protein_coding MGP_BALBcJ_T0022206.1 MGP_BALBcJ_G0016457.1 mouse_genomes_project 1 133766753 133769997 + Ube2t protein_coding retained_intron MGP_BALBcJ_T0022207.1 MGP_BALBcJ_G0016457.1 mouse_genomes_project 1 133775441 133778290 + MGP_BALBcJ_P0022207 Ube2t protein_coding protein_coding MGP_BALBcJ_T0022208.1 MGP_BALBcJ_G0016457.1 mouse_genomes_project 1 133776086 133776988 + Ube2t protein_coding retained_intron MGP_BALBcJ_T0005696.1 MGP_BALBcJ_G0004787.1 mouse_genomes_project 1 47999259 47999787 - Gm29665 lincRNA lincRNA MGP_BALBcJ_T0000734.1 MGP_BALBcJ_G0000670.1 mouse_genomes_project 1 171629789 171631356 + TEC TEC MGP_BALBcJ_T0005915.1 MGP_BALBcJ_G0004962.1 mouse_genomes_project 1 152720916 152737553 - C230024C17Rik lincRNA lincRNA MGP_BALBcJ_T0005818.1 MGP_BALBcJ_G0004884.1 mouse_genomes_project 1 91517261 91518429 - Gm28086 lincRNA lincRNA MGP_BALBcJ_T0023737.1 MGP_BALBcJ_G0016792.1 mouse_genomes_project 1 177899513 177929386 + Efcab2 protein_coding processed_transcript MGP_BALBcJ_T0023738.1 MGP_BALBcJ_G0016792.1 mouse_genomes_project 1 177899531 177976043 + MGP_BALBcJ_P0023738 Efcab2 protein_coding protein_coding MGP_BALBcJ_T0023739.1 MGP_BALBcJ_G0016792.1 mouse_genomes_project 1 177939192 177973011 + Efcab2 protein_coding processed_transcript MGP_BALBcJ_T0101833.1 MGP_BALBcJ_G0039759.1 mouse_genomes_project 1 169259711 169261400 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101834.1 MGP_BALBcJ_G0039759.1 mouse_genomes_project 1 169261040 169261241 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0012164.1 MGP_BALBcJ_G0010261.1 mouse_genomes_project 1 110371696 110372360 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022415.1 MGP_BALBcJ_G0016501.1 mouse_genomes_project 1 138641311 138744989 - MGP_BALBcJ_P0022415 Cfhr2 protein_coding protein_coding MGP_BALBcJ_T0022416.1 MGP_BALBcJ_G0016501.1 mouse_genomes_project 1 138647156 138745001 - MGP_BALBcJ_P0022416 Cfhr2 protein_coding protein_coding MGP_BALBcJ_T0012078.1 MGP_BALBcJ_G0010175.1 mouse_genomes_project 1 71535462 71536458 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000655.1 MGP_BALBcJ_G0000591.1 mouse_genomes_project 1 137994201 137996832 + TEC TEC MGP_BALBcJ_T0012030.1 MGP_BALBcJ_G0010127.1 mouse_genomes_project 1 56677802 56678253 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022179.1 MGP_BALBcJ_G0016452.1 mouse_genomes_project 1 133292195 133306312 + MGP_BALBcJ_P0022179 Rabif protein_coding protein_coding MGP_BALBcJ_T0024015.1 MGP_BALBcJ_G0016848.1 mouse_genomes_project 1 184387332 184399681 - MGP_BALBcJ_P0024015 C130074G19Rik protein_coding protein_coding MGP_BALBcJ_T0012286.1 MGP_BALBcJ_G0010383.1 mouse_genomes_project 1 162737425 162738467 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009467.1 MGP_BALBcJ_G0007592.1 mouse_genomes_project 1 61148264 61148353 + Gm24557 miRNA miRNA MGP_BALBcJ_T0099147.1 MGP_BALBcJ_G0037183.1 mouse_genomes_project 1 170846786 170846841 - Gm26412 snRNA snRNA MGP_BALBcJ_T0099077.1 MGP_BALBcJ_G0037113.1 mouse_genomes_project 1 29471089 29471196 - Gm25814 snRNA snRNA MGP_BALBcJ_T0005774.1 MGP_BALBcJ_G0004845.1 mouse_genomes_project 1 76630512 76663497 - lincRNA lincRNA MGP_BALBcJ_T0022748.1 MGP_BALBcJ_G0016564.1 mouse_genomes_project 1 155274428 155291506 + MGP_BALBcJ_P0022748 Nphs2 protein_coding protein_coding MGP_BALBcJ_T0022749.1 MGP_BALBcJ_G0016564.1 mouse_genomes_project 1 155274744 155289902 + MGP_BALBcJ_P0022749 Nphs2 protein_coding protein_coding MGP_BALBcJ_T0016939.1 MGP_BALBcJ_G0015028.1 mouse_genomes_project 1 33845709 33847676 + D430040D24Rik processed_transcript retained_intron MGP_BALBcJ_T0016940.1 MGP_BALBcJ_G0015028.1 mouse_genomes_project 1 33846367 33853622 + D430040D24Rik processed_transcript antisense MGP_BALBcJ_T0020210.1 MGP_BALBcJ_G0016044.1 mouse_genomes_project 1 63090367 63111190 - MGP_BALBcJ_P0020210 Gm28845 protein_coding protein_coding MGP_BALBcJ_T0005727.1 MGP_BALBcJ_G0004812.1 mouse_genomes_project 1 60795237 60806253 - Gm4208 lincRNA lincRNA MGP_BALBcJ_T0002913.1 MGP_BALBcJ_G0002741.1 mouse_genomes_project 1 161257327 161265231 + Dnm3os antisense antisense MGP_BALBcJ_T0002914.1 MGP_BALBcJ_G0002741.1 mouse_genomes_project 1 161257327 161265233 + Dnm3os antisense antisense MGP_BALBcJ_T0002915.1 MGP_BALBcJ_G0002741.1 mouse_genomes_project 1 161257368 161261801 + Dnm3os antisense antisense MGP_BALBcJ_T0021982.1 MGP_BALBcJ_G0016409.1 mouse_genomes_project 1 130876832 130903636 - MGP_BALBcJ_P0021982 Cdk18 protein_coding protein_coding MGP_BALBcJ_T0021983.1 MGP_BALBcJ_G0016409.1 mouse_genomes_project 1 130879181 130881509 - Cdk18 protein_coding retained_intron MGP_BALBcJ_T0021984.1 MGP_BALBcJ_G0016409.1 mouse_genomes_project 1 130879359 130903557 - MGP_BALBcJ_P0021984 Cdk18 protein_coding protein_coding MGP_BALBcJ_T0021985.1 MGP_BALBcJ_G0016409.1 mouse_genomes_project 1 130879426 130881286 - MGP_BALBcJ_P0021985 Cdk18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021986.1 MGP_BALBcJ_G0016409.1 mouse_genomes_project 1 130879529 130880851 - Cdk18 protein_coding retained_intron MGP_BALBcJ_T0002957.1 MGP_BALBcJ_G0002776.1 mouse_genomes_project 1 184948459 184960909 - 9630028B13Rik antisense antisense MGP_BALBcJ_T0006018.1 MGP_BALBcJ_G0005040.1 mouse_genomes_project 1 186300612 186304097 + A430105J06Rik lincRNA lincRNA MGP_BALBcJ_T0024111.1 MGP_BALBcJ_G0016867.1 mouse_genomes_project 1 189434006 189477884 - MGP_BALBcJ_P0024111 Smyd2 protein_coding protein_coding MGP_BALBcJ_T0024112.1 MGP_BALBcJ_G0016867.1 mouse_genomes_project 1 189434008 189442517 - Smyd2 protein_coding processed_transcript MGP_BALBcJ_T0024113.1 MGP_BALBcJ_G0016867.1 mouse_genomes_project 1 189434156 189435887 - Smyd2 protein_coding retained_intron MGP_BALBcJ_T0024114.1 MGP_BALBcJ_G0016867.1 mouse_genomes_project 1 189438560 189477774 - Smyd2 protein_coding retained_intron MGP_BALBcJ_T0019667.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715567 49751291 + MGP_BALBcJ_P0019667 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019668.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715582 49757744 + MGP_BALBcJ_P0019668 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019669.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715617 49751291 + MGP_BALBcJ_P0019669 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019670.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715619 49756886 + MGP_BALBcJ_P0019670 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019671.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715625 49728525 + MGP_BALBcJ_P0019671 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019672.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715676 49751210 + MGP_BALBcJ_P0019672 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019673.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715686 49716522 + Stat1 protein_coding retained_intron MGP_BALBcJ_T0019674.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715699 49733744 + Stat1 protein_coding retained_intron MGP_BALBcJ_T0019675.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49715751 49756609 + MGP_BALBcJ_P0019675 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019676.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49745993 49748289 + Stat1 protein_coding retained_intron MGP_BALBcJ_T0019677.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49746147 49757742 + MGP_BALBcJ_P0019677 Stat1 protein_coding protein_coding MGP_BALBcJ_T0019678.1 MGP_BALBcJ_G0015945.1 mouse_genomes_project 1 49748142 49755439 + MGP_BALBcJ_P0019678 Stat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011957.1 MGP_BALBcJ_G0010054.1 mouse_genomes_project 1 33890186 33890530 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000545.1 MGP_BALBcJ_G0000483.1 mouse_genomes_project 1 85020073 85022382 + TEC TEC MGP_BALBcJ_T0020201.1 MGP_BALBcJ_G0016039.1 mouse_genomes_project 1 63040675 63043183 - MGP_BALBcJ_P0020201 Cryge protein_coding protein_coding MGP_BALBcJ_T0020202.1 MGP_BALBcJ_G0016039.1 mouse_genomes_project 1 63040678 63043153 - MGP_BALBcJ_P0020202 Cryge protein_coding protein_coding MGP_BALBcJ_T0023629.1 MGP_BALBcJ_G0016768.1 mouse_genomes_project 1 173732744 173740115 + MGP_BALBcJ_P0023629 Olfr414 protein_coding protein_coding MGP_BALBcJ_T0023630.1 MGP_BALBcJ_G0016768.1 mouse_genomes_project 1 173738993 173739948 + MGP_BALBcJ_P0023630 Olfr414 protein_coding protein_coding MGP_BALBcJ_T0019833.1 MGP_BALBcJ_G0015974.1 mouse_genomes_project 1 53261719 53627227 + MGP_BALBcJ_P0019833 Plcl1 protein_coding protein_coding MGP_BALBcJ_T0019834.1 MGP_BALBcJ_G0015974.1 mouse_genomes_project 1 53573939 53608234 + Plcl1 protein_coding processed_transcript MGP_BALBcJ_T0009452.1 MGP_BALBcJ_G0007577.1 mouse_genomes_project 1 33425905 33425967 - Mir6897 miRNA miRNA MGP_BALBcJ_T0023055.1 MGP_BALBcJ_G0016617.1 mouse_genomes_project 1 162953951 163004277 - MGP_BALBcJ_P0023055 BC055324 protein_coding protein_coding MGP_BALBcJ_T0023057.1 MGP_BALBcJ_G0016617.1 mouse_genomes_project 1 162961712 163004277 - MGP_BALBcJ_P0023057 BC055324 protein_coding protein_coding MGP_BALBcJ_T0023058.1 MGP_BALBcJ_G0016617.1 mouse_genomes_project 1 162962233 162970138 - MGP_BALBcJ_P0023058 BC055324 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023059.1 MGP_BALBcJ_G0016617.1 mouse_genomes_project 1 162976286 162981494 - BC055324 protein_coding retained_intron MGP_BALBcJ_T0023060.1 MGP_BALBcJ_G0016617.1 mouse_genomes_project 1 162996370 163004245 - MGP_BALBcJ_P0023060 BC055324 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023061.1 MGP_BALBcJ_G0016617.1 mouse_genomes_project 1 162999218 163004022 - BC055324 protein_coding processed_transcript MGP_BALBcJ_T0021319.1 MGP_BALBcJ_G0016264.1 mouse_genomes_project 1 91248050 91290112 - MGP_BALBcJ_P0021319 Ankmy1 protein_coding unknown_likely_coding MGP_BALBcJ_T0021320.1 MGP_BALBcJ_G0016264.1 mouse_genomes_project 1 91256995 91290435 - MGP_BALBcJ_P0021320 Ankmy1 protein_coding protein_coding MGP_BALBcJ_T0021321.1 MGP_BALBcJ_G0016264.1 mouse_genomes_project 1 91256995 91290435 - MGP_BALBcJ_P0021321 Ankmy1 protein_coding protein_coding MGP_BALBcJ_T0009540.1 MGP_BALBcJ_G0007665.1 mouse_genomes_project 1 193063307 193063375 - Mir205 miRNA miRNA MGP_BALBcJ_T0024233.1 MGP_BALBcJ_G0016892.1 mouse_genomes_project 1 192373573 192384843 - MGP_BALBcJ_P0024233 Sertad4 protein_coding protein_coding MGP_BALBcJ_T0024234.1 MGP_BALBcJ_G0016892.1 mouse_genomes_project 1 192373574 192380833 - MGP_BALBcJ_P0024234 Sertad4 protein_coding protein_coding MGP_BALBcJ_T0024235.1 MGP_BALBcJ_G0016892.1 mouse_genomes_project 1 192376149 192380833 - MGP_BALBcJ_P0024235 Sertad4 protein_coding protein_coding MGP_BALBcJ_T0024236.1 MGP_BALBcJ_G0016892.1 mouse_genomes_project 1 192383295 192384573 - Sertad4 protein_coding processed_transcript MGP_BALBcJ_T0000410.1 MGP_BALBcJ_G0000349.1 mouse_genomes_project 1 22901612 22905193 - TEC TEC MGP_BALBcJ_T0012263.1 MGP_BALBcJ_G0010360.1 mouse_genomes_project 1 151951586 151952289 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012154.1 MGP_BALBcJ_G0010251.1 mouse_genomes_project 1 106872884 106875353 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000476.1 MGP_BALBcJ_G0000414.1 mouse_genomes_project 1 57825994 57826714 - TEC TEC MGP_BALBcJ_T0005816.1 MGP_BALBcJ_G0004882.1 mouse_genomes_project 1 91097728 91100697 - Gm29483 lincRNA lincRNA MGP_BALBcJ_T0023876.1 MGP_BALBcJ_G0016819.1 mouse_genomes_project 1 180621477 180682573 - MGP_BALBcJ_P0023876 Nvl protein_coding protein_coding MGP_BALBcJ_T0023877.1 MGP_BALBcJ_G0016819.1 mouse_genomes_project 1 180625687 180628493 - Nvl protein_coding processed_transcript MGP_BALBcJ_T0023878.1 MGP_BALBcJ_G0016819.1 mouse_genomes_project 1 180627983 180631076 - Nvl protein_coding retained_intron MGP_BALBcJ_T0023879.1 MGP_BALBcJ_G0016819.1 mouse_genomes_project 1 180631532 180642344 - Nvl protein_coding retained_intron MGP_BALBcJ_T0023880.1 MGP_BALBcJ_G0016819.1 mouse_genomes_project 1 180638005 180682544 - MGP_BALBcJ_P0023880 Nvl protein_coding unknown_likely_coding MGP_BALBcJ_T0023881.1 MGP_BALBcJ_G0016819.1 mouse_genomes_project 1 180674560 180677051 - Nvl protein_coding retained_intron MGP_BALBcJ_T0100396.1 MGP_BALBcJ_G0038432.1 mouse_genomes_project 1 160061782 160061842 + Gm23212 snoRNA snoRNA MGP_BALBcJ_T0023439.1 MGP_BALBcJ_G0016703.1 mouse_genomes_project 1 170490400 170490895 + Tstd1 protein_coding processed_transcript MGP_BALBcJ_T0023440.1 MGP_BALBcJ_G0016703.1 mouse_genomes_project 1 170490561 170491881 + MGP_BALBcJ_P0023440 Tstd1 protein_coding protein_coding MGP_BALBcJ_T0023441.1 MGP_BALBcJ_G0016703.1 mouse_genomes_project 1 170491247 170491880 + Tstd1 protein_coding retained_intron MGP_BALBcJ_T0005891.1 MGP_BALBcJ_G0004944.1 mouse_genomes_project 1 135526369 135545571 + Gm19705 lincRNA lincRNA MGP_BALBcJ_T0005892.1 MGP_BALBcJ_G0004944.1 mouse_genomes_project 1 135532063 135539043 + Gm19705 lincRNA lincRNA MGP_BALBcJ_T0005893.1 MGP_BALBcJ_G0004944.1 mouse_genomes_project 1 135539711 135547897 + Gm19705 lincRNA lincRNA MGP_BALBcJ_T0005894.1 MGP_BALBcJ_G0004944.1 mouse_genomes_project 1 135539944 135547895 + Gm19705 lincRNA lincRNA MGP_BALBcJ_T0098784.1 MGP_BALBcJ_G0036838.1 mouse_genomes_project 1 48758239 48760503 + Gm28320 sense_intronic sense_intronic MGP_BALBcJ_T0002746.1 MGP_BALBcJ_G0002612.1 mouse_genomes_project 1 14794747 14858971 - Gm28153 antisense antisense MGP_BALBcJ_T0023572.1 MGP_BALBcJ_G0016735.1 mouse_genomes_project 1 171751845 171754061 - MGP_BALBcJ_P0023572 Dusp23 protein_coding protein_coding MGP_BALBcJ_T0009538.1 MGP_BALBcJ_G0007663.1 mouse_genomes_project 1 190055723 190055811 - miRNA miRNA MGP_BALBcJ_T0100341.1 MGP_BALBcJ_G0038377.1 mouse_genomes_project 1 55279401 55279531 - Gm22371 snoRNA snoRNA MGP_BALBcJ_T0006037.1 MGP_BALBcJ_G0005056.1 mouse_genomes_project 1 193771638 193782216 - 4930503O07Rik lincRNA lincRNA MGP_BALBcJ_T0011867.1 MGP_BALBcJ_G0009964.1 mouse_genomes_project 1 6850675 6851032 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000378.1 MGP_BALBcJ_G0000319.1 mouse_genomes_project 1 10669083 10670546 - TEC TEC MGP_BALBcJ_T0020988.1 MGP_BALBcJ_G0016188.1 mouse_genomes_project 1 84677008 84717423 - Pde6d protein_coding retained_intron MGP_BALBcJ_T0020989.1 MGP_BALBcJ_G0016188.1 mouse_genomes_project 1 84677008 84717423 - MGP_BALBcJ_P0020989 Pde6d protein_coding protein_coding MGP_BALBcJ_T0020990.1 MGP_BALBcJ_G0016188.1 mouse_genomes_project 1 84677036 84717505 - MGP_BALBcJ_P0020990 Pde6d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020991.1 MGP_BALBcJ_G0016188.1 mouse_genomes_project 1 84677534 84717393 - Pde6d protein_coding processed_transcript MGP_BALBcJ_T0020992.1 MGP_BALBcJ_G0016188.1 mouse_genomes_project 1 84679406 84717423 - MGP_BALBcJ_P0020992 Pde6d protein_coding protein_coding MGP_BALBcJ_T0099105.1 MGP_BALBcJ_G0037141.1 mouse_genomes_project 1 85404605 85404706 + Gm26187 snRNA snRNA MGP_BALBcJ_T0002868.1 MGP_BALBcJ_G0002706.1 mouse_genomes_project 1 131510412 131513884 + Gm10538 antisense antisense MGP_BALBcJ_T0011970.1 MGP_BALBcJ_G0010067.1 mouse_genomes_project 1 41172646 41173925 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021021.1 MGP_BALBcJ_G0016198.1 mouse_genomes_project 1 85356195 85359835 + MGP_BALBcJ_P0021021 Chrng protein_coding protein_coding MGP_BALBcJ_T0021022.1 MGP_BALBcJ_G0016198.1 mouse_genomes_project 1 85357348 85359834 + MGP_BALBcJ_P0021022 Chrng protein_coding protein_coding MGP_BALBcJ_T0021023.1 MGP_BALBcJ_G0016198.1 mouse_genomes_project 1 85357349 85364516 + MGP_BALBcJ_P0021023 Chrng protein_coding protein_coding MGP_BALBcJ_T0021024.1 MGP_BALBcJ_G0016198.1 mouse_genomes_project 1 85357423 85359834 + MGP_BALBcJ_P0021024 Chrng protein_coding protein_coding MGP_BALBcJ_T0021025.1 MGP_BALBcJ_G0016198.1 mouse_genomes_project 1 85357612 85360134 + Chrng protein_coding retained_intron MGP_BALBcJ_T0002576.1 MGP_BALBcJ_G0002477.1 mouse_genomes_project 1 168183202 168183755 + MGP_BALBcJ_P0002576 TR_V_gene TR_V_gene MGP_BALBcJ_T0011218.1 MGP_BALBcJ_G0009343.1 mouse_genomes_project 1 26559613 26559725 - Gm25586 misc_RNA misc_RNA MGP_BALBcJ_T0000412.1 MGP_BALBcJ_G0000351.1 mouse_genomes_project 1 22943476 22948024 - TEC TEC MGP_BALBcJ_T0018872.1 MGP_BALBcJ_G0015778.1 mouse_genomes_project 1 10150784 10164042 - MGP_BALBcJ_P0018872 Prdm14 protein_coding protein_coding MGP_BALBcJ_T0002729.1 MGP_BALBcJ_G0002603.1 mouse_genomes_project 1 6794211 6840127 + 1700034P13Rik antisense antisense MGP_BALBcJ_T0002730.1 MGP_BALBcJ_G0002603.1 mouse_genomes_project 1 6794519 6839317 + 1700034P13Rik antisense antisense MGP_BALBcJ_T0002731.1 MGP_BALBcJ_G0002603.1 mouse_genomes_project 1 6795044 6818016 + 1700034P13Rik antisense antisense MGP_BALBcJ_T0002732.1 MGP_BALBcJ_G0002603.1 mouse_genomes_project 1 6795150 6817855 + 1700034P13Rik antisense antisense MGP_BALBcJ_T0098428.1 MGP_BALBcJ_G0036482.1 mouse_genomes_project 1 88688933 88689040 + Gm27648 rRNA rRNA MGP_BALBcJ_T0011931.1 MGP_BALBcJ_G0010028.1 mouse_genomes_project 1 28544041 28544682 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024148.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190623920 190640219 - MGP_BALBcJ_P0024148 Tatdn3 protein_coding protein_coding MGP_BALBcJ_T0024149.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190623932 190640191 - MGP_BALBcJ_P0024149 Tatdn3 protein_coding protein_coding MGP_BALBcJ_T0024150.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190623936 190640191 - MGP_BALBcJ_P0024150 Tatdn3 protein_coding protein_coding MGP_BALBcJ_T0024151.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190623936 190640192 - MGP_BALBcJ_P0024151 Tatdn3 protein_coding protein_coding MGP_BALBcJ_T0024152.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190623939 190628118 - Tatdn3 protein_coding retained_intron MGP_BALBcJ_T0024153.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190632209 190636131 - Tatdn3 protein_coding retained_intron MGP_BALBcJ_T0024154.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190635183 190636726 - Tatdn3 protein_coding retained_intron MGP_BALBcJ_T0024155.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190636065 190640191 - Tatdn3 protein_coding retained_intron MGP_BALBcJ_T0024156.1 MGP_BALBcJ_G0016874.1 mouse_genomes_project 1 190637338 190640191 - Tatdn3 protein_coding retained_intron MGP_BALBcJ_T0100384.1 MGP_BALBcJ_G0038420.1 mouse_genomes_project 1 138885549 138885691 + Gm26048 snoRNA snoRNA MGP_BALBcJ_T0020014.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619447 57627140 + Nop58 protein_coding processed_transcript MGP_BALBcJ_T0020015.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619453 57645977 + MGP_BALBcJ_P0020015 Nop58 protein_coding protein_coding MGP_BALBcJ_T0020016.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619461 57630523 + MGP_BALBcJ_P0020016 Nop58 protein_coding protein_coding MGP_BALBcJ_T0020017.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619479 57627162 + Nop58 protein_coding retained_intron MGP_BALBcJ_T0020018.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619482 57625463 + Nop58 protein_coding retained_intron MGP_BALBcJ_T0020019.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619485 57653469 + MGP_BALBcJ_P0020019 Nop58 protein_coding protein_coding MGP_BALBcJ_T0020020.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619497 57630498 + MGP_BALBcJ_P0020020 Nop58 protein_coding protein_coding MGP_BALBcJ_T0020021.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57619530 57632887 + MGP_BALBcJ_P0020021 Nop58 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020022.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57624652 57632851 + Nop58 protein_coding retained_intron MGP_BALBcJ_T0020023.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57626917 57638674 + Nop58 protein_coding retained_intron MGP_BALBcJ_T0020024.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57630472 57638626 + MGP_BALBcJ_P0020024 Nop58 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020025.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57632880 57641531 + MGP_BALBcJ_P0020025 Nop58 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020026.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57638623 57643566 + MGP_BALBcJ_P0020026 Nop58 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020027.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57638662 57645746 + MGP_BALBcJ_P0020027 Nop58 protein_coding protein_coding MGP_BALBcJ_T0020028.1 MGP_BALBcJ_G0016007.1 mouse_genomes_project 1 57639173 57645747 + MGP_BALBcJ_P0020028 Nop58 protein_coding protein_coding MGP_BALBcJ_T0099131.1 MGP_BALBcJ_G0037167.1 mouse_genomes_project 1 138621400 138621504 + Gm26271 snRNA snRNA MGP_BALBcJ_T0020871.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82146307 82389782 - MGP_BALBcJ_P0020871 Pid1 protein_coding protein_coding MGP_BALBcJ_T0020872.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82147242 82441017 - MGP_BALBcJ_P0020872 Pid1 protein_coding protein_coding MGP_BALBcJ_T0020873.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82147937 82163534 - Pid1 protein_coding processed_transcript MGP_BALBcJ_T0020874.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82193106 82389560 - MGP_BALBcJ_P0020874 Pid1 protein_coding protein_coding MGP_BALBcJ_T0020875.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82224761 82468055 - MGP_BALBcJ_P0020875 Pid1 protein_coding protein_coding MGP_BALBcJ_T0020876.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82232299 82446491 - MGP_BALBcJ_P0020876 Pid1 protein_coding protein_coding MGP_BALBcJ_T0020877.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82268231 82389748 - MGP_BALBcJ_P0020877 Pid1 protein_coding protein_coding MGP_BALBcJ_T0020878.1 MGP_BALBcJ_G0016164.1 mouse_genomes_project 1 82388329 82389760 - Pid1 protein_coding retained_intron MGP_BALBcJ_T0005815.1 MGP_BALBcJ_G0004881.1 mouse_genomes_project 1 90966212 90968472 + Gm28479 lincRNA lincRNA MGP_BALBcJ_T0022742.1 MGP_BALBcJ_G0016562.1 mouse_genomes_project 1 155079450 155166767 - MGP_BALBcJ_P0022742 Fam163a protein_coding protein_coding MGP_BALBcJ_T0021422.1 MGP_BALBcJ_G0016283.1 mouse_genomes_project 1 92089744 92099892 + MGP_BALBcJ_P0021422 Bok protein_coding protein_coding MGP_BALBcJ_T0021423.1 MGP_BALBcJ_G0016283.1 mouse_genomes_project 1 92089786 92099338 + MGP_BALBcJ_P0021423 Bok protein_coding protein_coding MGP_BALBcJ_T0021424.1 MGP_BALBcJ_G0016283.1 mouse_genomes_project 1 92090347 92098247 + MGP_BALBcJ_P0021424 Bok protein_coding protein_coding MGP_BALBcJ_T0021425.1 MGP_BALBcJ_G0016283.1 mouse_genomes_project 1 92093293 92099597 + MGP_BALBcJ_P0021425 Bok protein_coding protein_coding MGP_BALBcJ_T0021426.1 MGP_BALBcJ_G0016283.1 mouse_genomes_project 1 92097992 92099583 + Bok protein_coding processed_transcript MGP_BALBcJ_T0000767.1 MGP_BALBcJ_G0000702.1 mouse_genomes_project 1 181963808 181964566 - TEC TEC MGP_BALBcJ_T0000768.1 MGP_BALBcJ_G0000702.1 mouse_genomes_project 1 181964163 181964565 - TEC TEC MGP_BALBcJ_T0012035.1 MGP_BALBcJ_G0010132.1 mouse_genomes_project 1 58478983 58479436 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000585.1 MGP_BALBcJ_G0000523.1 mouse_genomes_project 1 119973650 119976707 + TEC TEC MGP_BALBcJ_T0020096.1 MGP_BALBcJ_G0016019.1 mouse_genomes_project 1 58944641 58961786 + MGP_BALBcJ_P0020096 Icos protein_coding protein_coding MGP_BALBcJ_T0020097.1 MGP_BALBcJ_G0016019.1 mouse_genomes_project 1 58944641 58966284 + MGP_BALBcJ_P0020097 Icos protein_coding protein_coding MGP_BALBcJ_T0019520.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40427909 40480410 - MGP_BALBcJ_P0019520 Tgfbrap1 protein_coding protein_coding MGP_BALBcJ_T0019521.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40427929 40474502 - MGP_BALBcJ_P0019521 Tgfbrap1 protein_coding protein_coding MGP_BALBcJ_T0019522.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40435417 40441643 - Tgfbrap1 protein_coding retained_intron MGP_BALBcJ_T0019523.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40440600 40474220 - MGP_BALBcJ_P0019523 Tgfbrap1 protein_coding protein_coding MGP_BALBcJ_T0019524.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40452668 40480396 - MGP_BALBcJ_P0019524 Tgfbrap1 protein_coding protein_coding MGP_BALBcJ_T0019525.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40455413 40474236 - Tgfbrap1 protein_coding retained_intron MGP_BALBcJ_T0019526.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40455654 40480425 - Tgfbrap1 protein_coding retained_intron MGP_BALBcJ_T0019527.1 MGP_BALBcJ_G0015915.1 mouse_genomes_project 1 40456788 40480152 - MGP_BALBcJ_P0019527 Tgfbrap1 protein_coding protein_coding MGP_BALBcJ_T0022453.1 MGP_BALBcJ_G0016508.1 mouse_genomes_project 1 142864041 142868865 - MGP_BALBcJ_P0022453 Rgs2 protein_coding protein_coding MGP_BALBcJ_T0022454.1 MGP_BALBcJ_G0016508.1 mouse_genomes_project 1 142866383 142868839 - MGP_BALBcJ_P0022454 Rgs2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022455.1 MGP_BALBcJ_G0016508.1 mouse_genomes_project 1 142866586 142868736 - MGP_BALBcJ_P0022455 Rgs2 protein_coding protein_coding MGP_BALBcJ_T0022456.1 MGP_BALBcJ_G0016508.1 mouse_genomes_project 1 142867220 142868825 - Rgs2 protein_coding retained_intron MGP_BALBcJ_T0020623.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220045 73229133 + MGP_BALBcJ_P0020623 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020624.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220104 73228249 + MGP_BALBcJ_P0020624 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020625.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220104 73228249 + MGP_BALBcJ_P0020625 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020626.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220108 73229137 + MGP_BALBcJ_P0020626 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020627.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220126 73229135 + MGP_BALBcJ_P0020627 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020628.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220152 73228500 + MGP_BALBcJ_P0020628 Dnajb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020629.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220195 73229135 + MGP_BALBcJ_P0020629 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020630.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220253 73222973 + MGP_BALBcJ_P0020630 Dnajb2 protein_coding protein_coding MGP_BALBcJ_T0020631.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220411 73221321 + Dnajb2 protein_coding retained_intron MGP_BALBcJ_T0020632.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73220714 73221164 + Dnajb2 protein_coding retained_intron MGP_BALBcJ_T0020633.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73222563 73224366 + Dnajb2 protein_coding retained_intron MGP_BALBcJ_T0020634.1 MGP_BALBcJ_G0016119.1 mouse_genomes_project 1 73224853 73228372 + MGP_BALBcJ_P0020634 Dnajb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006035.1 MGP_BALBcJ_G0005054.1 mouse_genomes_project 1 192591998 192593622 - Gm31406 lincRNA lincRNA MGP_BALBcJ_T0012200.1 MGP_BALBcJ_G0010297.1 mouse_genomes_project 1 122449355 122450548 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018997.1 MGP_BALBcJ_G0015809.1 mouse_genomes_project 1 17903017 17920516 - MGP_BALBcJ_P0018997 Mcm3 protein_coding protein_coding MGP_BALBcJ_T0018998.1 MGP_BALBcJ_G0015809.1 mouse_genomes_project 1 17903022 17920464 - Mcm3 protein_coding retained_intron MGP_BALBcJ_T0018999.1 MGP_BALBcJ_G0015809.1 mouse_genomes_project 1 17903055 17903770 - Mcm3 protein_coding retained_intron MGP_BALBcJ_T0019000.1 MGP_BALBcJ_G0015809.1 mouse_genomes_project 1 17903214 17904966 - Mcm3 protein_coding retained_intron MGP_BALBcJ_T0019001.1 MGP_BALBcJ_G0015809.1 mouse_genomes_project 1 17904729 17905973 - Mcm3 protein_coding retained_intron MGP_BALBcJ_T0012230.1 MGP_BALBcJ_G0010327.1 mouse_genomes_project 1 137972220 137972995 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024237.1 MGP_BALBcJ_G0016893.1 mouse_genomes_project 1 192424849 192586789 - MGP_BALBcJ_P0024237 Syt14 protein_coding protein_coding MGP_BALBcJ_T0024238.1 MGP_BALBcJ_G0016893.1 mouse_genomes_project 1 192429602 192586676 - MGP_BALBcJ_P0024238 Syt14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024239.1 MGP_BALBcJ_G0016893.1 mouse_genomes_project 1 192430826 192586731 - MGP_BALBcJ_P0024239 Syt14 protein_coding protein_coding MGP_BALBcJ_T0024240.1 MGP_BALBcJ_G0016893.1 mouse_genomes_project 1 192470791 192586658 - Syt14 protein_coding retained_intron MGP_BALBcJ_T0005690.1 MGP_BALBcJ_G0004782.1 mouse_genomes_project 1 41129669 41130281 + Gm29157 lincRNA lincRNA MGP_BALBcJ_T0011979.1 MGP_BALBcJ_G0010076.1 mouse_genomes_project 1 42195806 42196473 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000642.1 MGP_BALBcJ_G0000579.1 mouse_genomes_project 1 136772850 136775873 + TEC TEC MGP_BALBcJ_T0000643.1 MGP_BALBcJ_G0000579.1 mouse_genomes_project 1 136773769 136775873 + TEC TEC MGP_BALBcJ_T0002784.1 MGP_BALBcJ_G0002644.1 mouse_genomes_project 1 52532262 52586670 + 4930444A19Rik antisense antisense MGP_BALBcJ_T0002785.1 MGP_BALBcJ_G0002644.1 mouse_genomes_project 1 52541062 52617632 + 4930444A19Rik antisense antisense MGP_BALBcJ_T0000681.1 MGP_BALBcJ_G0000617.1 mouse_genomes_project 1 154882703 154883450 - TEC TEC MGP_BALBcJ_T0023208.1 MGP_BALBcJ_G0016651.1 mouse_genomes_project 1 165987195 166077577 + MGP_BALBcJ_P0023208 Fam78b protein_coding protein_coding MGP_BALBcJ_T0023209.1 MGP_BALBcJ_G0016651.1 mouse_genomes_project 1 165987195 166077577 + MGP_BALBcJ_P0023209 Fam78b protein_coding protein_coding MGP_BALBcJ_T0023210.1 MGP_BALBcJ_G0016651.1 mouse_genomes_project 1 165987210 166075352 + MGP_BALBcJ_P0023210 Fam78b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023211.1 MGP_BALBcJ_G0016651.1 mouse_genomes_project 1 165987244 166067417 + MGP_BALBcJ_P0023211 Fam78b protein_coding protein_coding MGP_BALBcJ_T0023212.1 MGP_BALBcJ_G0016651.1 mouse_genomes_project 1 165987358 166074999 + MGP_BALBcJ_P0023212 Fam78b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023213.1 MGP_BALBcJ_G0016651.1 mouse_genomes_project 1 165987367 166077284 + MGP_BALBcJ_P0023213 Fam78b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005938.1 MGP_BALBcJ_G0004978.1 mouse_genomes_project 1 159861962 159862426 + Gm38060 lincRNA lincRNA MGP_BALBcJ_T0023252.1 MGP_BALBcJ_G0016663.1 mouse_genomes_project 1 168925525 168932721 + MGP_BALBcJ_P0023252 Ccdc190 protein_coding protein_coding MGP_BALBcJ_T0023253.1 MGP_BALBcJ_G0016663.1 mouse_genomes_project 1 168926806 168932481 + MGP_BALBcJ_P0023253 Ccdc190 protein_coding protein_coding MGP_BALBcJ_T0009473.1 MGP_BALBcJ_G0007598.1 mouse_genomes_project 1 65974303 65974399 + Gm23189 miRNA miRNA MGP_BALBcJ_T0012256.1 MGP_BALBcJ_G0010353.1 mouse_genomes_project 1 150048299 150049241 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000490.1 MGP_BALBcJ_G0000428.1 mouse_genomes_project 1 61236878 61237357 - TEC TEC MGP_BALBcJ_T0024165.1 MGP_BALBcJ_G0016877.1 mouse_genomes_project 1 190743769 190746003 - MGP_BALBcJ_P0024165 Fam71a protein_coding protein_coding MGP_BALBcJ_T0009485.1 MGP_BALBcJ_G0007610.1 mouse_genomes_project 1 82793331 82793408 + Mir5126 miRNA miRNA MGP_BALBcJ_T0102109.1 MGP_BALBcJ_G0039926.1 mouse_genomes_project 1 180536669 180536780 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099146.1 MGP_BALBcJ_G0037182.1 mouse_genomes_project 1 170565942 170566058 - Gm24871 snRNA snRNA MGP_BALBcJ_T0023277.1 MGP_BALBcJ_G0016669.1 mouse_genomes_project 1 169278131 169287738 + MGP_BALBcJ_P0023277 Sh2d1b1 protein_coding protein_coding MGP_BALBcJ_T0009471.1 MGP_BALBcJ_G0007596.1 mouse_genomes_project 1 62381628 62381698 + Gm25748 miRNA miRNA MGP_BALBcJ_T0100342.1 MGP_BALBcJ_G0038378.1 mouse_genomes_project 1 56009801 56009911 - Gm24548 snoRNA snoRNA MGP_BALBcJ_T0009453.1 MGP_BALBcJ_G0007578.1 mouse_genomes_project 1 33634653 33634730 - Mir6898 miRNA miRNA MGP_BALBcJ_T0021690.1 MGP_BALBcJ_G0016344.1 mouse_genomes_project 1 118644147 118702776 + MGP_BALBcJ_P0021690 Sctr protein_coding protein_coding MGP_BALBcJ_T0021691.1 MGP_BALBcJ_G0016344.1 mouse_genomes_project 1 118644287 118702774 + MGP_BALBcJ_P0021691 Sctr protein_coding protein_coding MGP_BALBcJ_T0020366.1 MGP_BALBcJ_G0016072.1 mouse_genomes_project 1 70670261 70729191 - MGP_BALBcJ_P0020366 Ankar protein_coding protein_coding MGP_BALBcJ_T0012107.1 MGP_BALBcJ_G0010204.1 mouse_genomes_project 1 85668386 85668509 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005645.1 MGP_BALBcJ_G0004754.1 mouse_genomes_project 1 28266611 28344824 - lincRNA lincRNA MGP_BALBcJ_T0099128.1 MGP_BALBcJ_G0037164.1 mouse_genomes_project 1 135858610 135858670 - Gm23763 snRNA snRNA MGP_BALBcJ_T0020355.1 MGP_BALBcJ_G0016069.1 mouse_genomes_project 1 70336059 70424361 + MGP_BALBcJ_P0020355 Xrcc5 protein_coding protein_coding MGP_BALBcJ_T0000704.1 MGP_BALBcJ_G0000640.1 mouse_genomes_project 1 159634298 159636367 - TEC TEC MGP_BALBcJ_T0005812.1 MGP_BALBcJ_G0004878.1 mouse_genomes_project 1 89989302 90001212 + Gm28380 lincRNA lincRNA MGP_BALBcJ_T0100389.1 MGP_BALBcJ_G0038425.1 mouse_genomes_project 1 153089912 153090017 - Gm25336 snoRNA snoRNA MGP_BALBcJ_T0012322.1 MGP_BALBcJ_G0010419.1 mouse_genomes_project 1 180228685 180229173 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000735.1 MGP_BALBcJ_G0000671.1 mouse_genomes_project 1 171994065 171994926 + TEC TEC MGP_BALBcJ_T0019879.1 MGP_BALBcJ_G0015983.1 mouse_genomes_project 1 55885825 55960764 + MGP_BALBcJ_P0019879 Aox1 protein_coding protein_coding MGP_BALBcJ_T0019880.1 MGP_BALBcJ_G0015983.1 mouse_genomes_project 1 55885858 55927179 + Aox1 protein_coding retained_intron MGP_BALBcJ_T0021666.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118180559 118285021 - MGP_BALBcJ_P0021666 Epb41l5 protein_coding protein_coding MGP_BALBcJ_T0021667.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118183652 118285019 - MGP_BALBcJ_P0021667 Epb41l5 protein_coding protein_coding MGP_BALBcJ_T0021668.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118189761 118235639 - Epb41l5 protein_coding retained_intron MGP_BALBcJ_T0021669.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118213473 118215761 - Epb41l5 protein_coding retained_intron MGP_BALBcJ_T0021670.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118226078 118285085 - MGP_BALBcJ_P0021670 Epb41l5 protein_coding protein_coding MGP_BALBcJ_T0021671.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118230410 118284702 - MGP_BALBcJ_P0021671 Epb41l5 protein_coding protein_coding MGP_BALBcJ_T0021672.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118230778 118234574 - Epb41l5 protein_coding retained_intron MGP_BALBcJ_T0021673.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118252807 118269197 - Epb41l5 protein_coding retained_intron MGP_BALBcJ_T0021674.1 MGP_BALBcJ_G0016340.1 mouse_genomes_project 1 118257105 118284709 - MGP_BALBcJ_P0021674 Epb41l5 protein_coding protein_coding MGP_BALBcJ_T0005839.1 MGP_BALBcJ_G0004901.1 mouse_genomes_project 1 106427422 106457882 + D830032E09Rik lincRNA lincRNA MGP_BALBcJ_T0005840.1 MGP_BALBcJ_G0004901.1 mouse_genomes_project 1 106427448 106457895 + D830032E09Rik lincRNA lincRNA MGP_BALBcJ_T0005841.1 MGP_BALBcJ_G0004901.1 mouse_genomes_project 1 106443718 106534734 + D830032E09Rik lincRNA lincRNA MGP_BALBcJ_T0099113.1 MGP_BALBcJ_G0037149.1 mouse_genomes_project 1 104402066 104402173 + Gm26214 snRNA snRNA MGP_BALBcJ_T0002922.1 MGP_BALBcJ_G0002747.1 mouse_genomes_project 1 164859508 164860398 - Gm37469 antisense antisense MGP_BALBcJ_T0101582.1 MGP_BALBcJ_G0039615.1 mouse_genomes_project 1 114148238 114164346 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101583.1 MGP_BALBcJ_G0039615.1 mouse_genomes_project 1 114148653 114149840 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101584.1 MGP_BALBcJ_G0039615.1 mouse_genomes_project 1 114149081 114164351 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0009487.1 MGP_BALBcJ_G0007612.1 mouse_genomes_project 1 83880366 83880444 + Gm25472 miRNA miRNA MGP_BALBcJ_T0012311.1 MGP_BALBcJ_G0010408.1 mouse_genomes_project 1 171887927 171888358 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012313.1 MGP_BALBcJ_G0010410.1 mouse_genomes_project 1 175653420 175653937 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019633.1 MGP_BALBcJ_G0015939.1 mouse_genomes_project 1 44394076 44441866 - MGP_BALBcJ_P0019633 Slc39a10 protein_coding protein_coding MGP_BALBcJ_T0019634.1 MGP_BALBcJ_G0015939.1 mouse_genomes_project 1 44404461 44422811 - Slc39a10 protein_coding retained_intron MGP_BALBcJ_T0019635.1 MGP_BALBcJ_G0015939.1 mouse_genomes_project 1 44422551 44480965 - MGP_BALBcJ_P0019635 Slc39a10 protein_coding protein_coding MGP_BALBcJ_T0019636.1 MGP_BALBcJ_G0015939.1 mouse_genomes_project 1 44422649 44476183 - MGP_BALBcJ_P0019636 Slc39a10 protein_coding protein_coding MGP_BALBcJ_T0099122.1 MGP_BALBcJ_G0037158.1 mouse_genomes_project 1 129369841 129369948 - Gm23623 snRNA snRNA MGP_BALBcJ_T0016969.1 MGP_BALBcJ_G0015042.1 mouse_genomes_project 1 86273889 86471795 - processed_transcript processed_transcript MGP_BALBcJ_T0016970.1 MGP_BALBcJ_G0015042.1 mouse_genomes_project 1 86449653 86471764 - processed_transcript processed_transcript MGP_BALBcJ_T0005689.1 MGP_BALBcJ_G0004781.1 mouse_genomes_project 1 40629504 40683912 - Gm29040 lincRNA lincRNA MGP_BALBcJ_T0011860.1 MGP_BALBcJ_G0009957.1 mouse_genomes_project 1 6430206 6432121 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021306.1 MGP_BALBcJ_G0016260.1 mouse_genomes_project 1 91002534 91003590 + MGP_BALBcJ_P0021306 Olfr12 protein_coding protein_coding MGP_BALBcJ_T0011233.1 MGP_BALBcJ_G0009358.1 mouse_genomes_project 1 129876895 129877248 - Gm25717 misc_RNA misc_RNA MGP_BALBcJ_T0005956.1 MGP_BALBcJ_G0004992.1 mouse_genomes_project 1 164786436 164787724 - Gm36972 lincRNA lincRNA MGP_BALBcJ_T0000599.1 MGP_BALBcJ_G0000537.1 mouse_genomes_project 1 124795420 124796742 - TEC TEC MGP_BALBcJ_T0012103.1 MGP_BALBcJ_G0010200.1 mouse_genomes_project 1 84453490 84454325 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012092.1 MGP_BALBcJ_G0010189.1 mouse_genomes_project 1 79835496 79836202 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024250.1 MGP_BALBcJ_G0016895.1 mouse_genomes_project 1 192699605 192718515 + MGP_BALBcJ_P0024250 Irf6 protein_coding protein_coding MGP_BALBcJ_T0024251.1 MGP_BALBcJ_G0016895.1 mouse_genomes_project 1 192699648 192713359 + Irf6 protein_coding retained_intron MGP_BALBcJ_T0024252.1 MGP_BALBcJ_G0016895.1 mouse_genomes_project 1 192703169 192710672 + Irf6 protein_coding retained_intron MGP_BALBcJ_T0024254.1 MGP_BALBcJ_G0016895.1 mouse_genomes_project 1 192714993 192715980 + Irf6 protein_coding retained_intron MGP_BALBcJ_T0000523.1 MGP_BALBcJ_G0000461.1 mouse_genomes_project 1 78359086 78360904 - TEC TEC MGP_BALBcJ_T0005883.1 MGP_BALBcJ_G0004936.1 mouse_genomes_project 1 133441687 133445954 - Gm26783 lincRNA lincRNA MGP_BALBcJ_T0002941.1 MGP_BALBcJ_G0002763.1 mouse_genomes_project 1 176218030 176222740 - Gm15423 antisense antisense MGP_BALBcJ_T0021227.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678475 89701559 + MGP_BALBcJ_P0021227 Scly protein_coding protein_coding MGP_BALBcJ_T0021228.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678497 89684012 + Scly protein_coding retained_intron MGP_BALBcJ_T0021229.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678505 89689221 + MGP_BALBcJ_P0021229 Scly protein_coding protein_coding MGP_BALBcJ_T0021230.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678506 89690329 + MGP_BALBcJ_P0021230 Scly protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021231.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678507 89691808 + Scly protein_coding retained_intron MGP_BALBcJ_T0021232.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678541 89689187 + MGP_BALBcJ_P0021232 Scly protein_coding protein_coding MGP_BALBcJ_T0021233.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678544 89689293 + MGP_BALBcJ_P0021233 Scly protein_coding protein_coding MGP_BALBcJ_T0021234.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89678564 89685939 + Scly protein_coding processed_transcript MGP_BALBcJ_T0021235.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89680436 89683370 + MGP_BALBcJ_P0021235 Scly protein_coding protein_coding MGP_BALBcJ_T0021236.1 MGP_BALBcJ_G0016241.1 mouse_genomes_project 1 89683297 89690350 + MGP_BALBcJ_P0021236 Scly protein_coding protein_coding MGP_BALBcJ_T0000773.1 MGP_BALBcJ_G0000707.1 mouse_genomes_project 1 184844098 184846516 + TEC TEC MGP_BALBcJ_T0021705.1 MGP_BALBcJ_G0016348.1 mouse_genomes_project 1 118831174 118906457 - MGP_BALBcJ_P0021705 Steap3 protein_coding protein_coding MGP_BALBcJ_T0021706.1 MGP_BALBcJ_G0016348.1 mouse_genomes_project 1 118864735 118912274 - MGP_BALBcJ_P0021706 Steap3 protein_coding protein_coding MGP_BALBcJ_T0021707.1 MGP_BALBcJ_G0016348.1 mouse_genomes_project 1 118866981 118911623 - MGP_BALBcJ_P0021707 Steap3 protein_coding protein_coding MGP_BALBcJ_T0021708.1 MGP_BALBcJ_G0016348.1 mouse_genomes_project 1 118867996 118911430 - MGP_BALBcJ_P0021708 Steap3 protein_coding protein_coding MGP_BALBcJ_T0005663.1 MGP_BALBcJ_G0004770.1 mouse_genomes_project 1 36364229 36373169 - Gm37821 lincRNA lincRNA MGP_BALBcJ_T0018992.1 MGP_BALBcJ_G0015807.1 mouse_genomes_project 1 17830230 17833821 + MGP_BALBcJ_P0018992 Il17a protein_coding protein_coding MGP_BALBcJ_T0022827.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157357783 157682268 + MGP_BALBcJ_P0022827 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022828.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157357814 157682270 + MGP_BALBcJ_P0022828 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022829.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157357849 157606767 + MGP_BALBcJ_P0022829 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022830.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157358386 157605927 + MGP_BALBcJ_P0022830 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022831.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157358399 157669354 + MGP_BALBcJ_P0022831 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022832.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157508641 157519977 + Astn1 protein_coding processed_transcript MGP_BALBcJ_T0022833.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157552728 157592997 + MGP_BALBcJ_P0022833 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022834.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157592747 157605096 + Astn1 protein_coding retained_intron MGP_BALBcJ_T0022835.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157646325 157657371 + MGP_BALBcJ_P0022835 Astn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022836.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157646473 157674348 + MGP_BALBcJ_P0022836 Astn1 protein_coding protein_coding MGP_BALBcJ_T0022837.1 MGP_BALBcJ_G0016577.1 mouse_genomes_project 1 157668645 157679041 + Astn1 protein_coding processed_transcript MGP_BALBcJ_T0102107.1 MGP_BALBcJ_G0039924.1 mouse_genomes_project 1 177603670 177604643 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011221.1 MGP_BALBcJ_G0009346.1 mouse_genomes_project 1 45303504 45303774 - Gm23829 misc_RNA misc_RNA MGP_BALBcJ_T0024166.1 MGP_BALBcJ_G0016878.1 mouse_genomes_project 1 190751482 190764518 - MGP_BALBcJ_P0024166 Atf3 protein_coding protein_coding MGP_BALBcJ_T0024167.1 MGP_BALBcJ_G0016878.1 mouse_genomes_project 1 190751482 190799297 - MGP_BALBcJ_P0024167 Atf3 protein_coding protein_coding MGP_BALBcJ_T0024168.1 MGP_BALBcJ_G0016878.1 mouse_genomes_project 1 190752611 190764286 - Atf3 protein_coding processed_transcript MGP_BALBcJ_T0000463.1 MGP_BALBcJ_G0000401.1 mouse_genomes_project 1 51640923 51642380 + TEC TEC MGP_BALBcJ_T0021948.1 MGP_BALBcJ_G0016403.1 mouse_genomes_project 1 130585920 130588700 + Slc41a1 protein_coding processed_transcript MGP_BALBcJ_T0021949.1 MGP_BALBcJ_G0016403.1 mouse_genomes_project 1 130586404 130607280 + MGP_BALBcJ_P0021949 Slc41a1 protein_coding protein_coding MGP_BALBcJ_T0021950.1 MGP_BALBcJ_G0016403.1 mouse_genomes_project 1 130601254 130605044 + Slc41a1 protein_coding retained_intron MGP_BALBcJ_T0011928.1 MGP_BALBcJ_G0010025.1 mouse_genomes_project 1 28525522 28526081 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100365.1 MGP_BALBcJ_G0038401.1 mouse_genomes_project 1 100541501 100541633 - Gm24122 snoRNA snoRNA MGP_BALBcJ_T0020002.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57449692 57567020 + MGP_BALBcJ_P0020002 Gm973 protein_coding protein_coding MGP_BALBcJ_T0020003.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57457957 57460642 + MGP_BALBcJ_P0020003 Gm973 protein_coding protein_coding MGP_BALBcJ_T0020004.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57458321 57530300 + MGP_BALBcJ_P0020004 Gm973 protein_coding unknown_likely_coding MGP_BALBcJ_T0020005.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57477888 57489848 + Gm973 protein_coding retained_intron MGP_BALBcJ_T0020006.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57482380 57495794 + Gm973 protein_coding processed_transcript MGP_BALBcJ_T0020007.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57491561 57499633 + Gm973 protein_coding retained_intron MGP_BALBcJ_T0020009.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57551922 57560754 + Gm973 protein_coding processed_transcript MGP_BALBcJ_T0020010.1 MGP_BALBcJ_G0016005.1 mouse_genomes_project 1 57562833 57568928 + MGP_BALBcJ_P0020010 Gm973 protein_coding protein_coding MGP_BALBcJ_T0012328.1 MGP_BALBcJ_G0010425.1 mouse_genomes_project 1 181631264 181631681 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022337.1 MGP_BALBcJ_G0016484.1 mouse_genomes_project 1 135253988 135256510 + Ddx59 protein_coding retained_intron MGP_BALBcJ_T0022338.1 MGP_BALBcJ_G0016484.1 mouse_genomes_project 1 135253988 135279407 + MGP_BALBcJ_P0022338 Ddx59 protein_coding protein_coding MGP_BALBcJ_T0022339.1 MGP_BALBcJ_G0016484.1 mouse_genomes_project 1 135269431 135271674 + Ddx59 protein_coding processed_transcript MGP_BALBcJ_T0022340.1 MGP_BALBcJ_G0016484.1 mouse_genomes_project 1 135271650 135273315 + Ddx59 protein_coding retained_intron MGP_BALBcJ_T0021458.1 MGP_BALBcJ_G0016289.1 mouse_genomes_project 1 92260939 92487980 + MGP_BALBcJ_P0021458 protein_coding protein_coding MGP_BALBcJ_T0012155.1 MGP_BALBcJ_G0010252.1 mouse_genomes_project 1 107091738 107091916 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019641.1 MGP_BALBcJ_G0015941.1 mouse_genomes_project 1 48895467 48909311 + MGP_BALBcJ_P0019641 Sdpr protein_coding protein_coding MGP_BALBcJ_T0099158.1 MGP_BALBcJ_G0037194.1 mouse_genomes_project 1 188303403 188303507 + Gm25269 snRNA snRNA MGP_BALBcJ_T0000442.1 MGP_BALBcJ_G0000380.1 mouse_genomes_project 1 34630163 34630697 - TEC TEC MGP_BALBcJ_T0009507.1 MGP_BALBcJ_G0007632.1 mouse_genomes_project 1 131705586 131705707 - Gm44300 miRNA miRNA MGP_BALBcJ_T0005953.1 MGP_BALBcJ_G0004990.1 mouse_genomes_project 1 164063751 164067842 - 4930568G15Rik lincRNA lincRNA MGP_BALBcJ_T0005954.1 MGP_BALBcJ_G0004990.1 mouse_genomes_project 1 164066344 164094359 - 4930568G15Rik lincRNA lincRNA MGP_BALBcJ_T0000443.1 MGP_BALBcJ_G0000381.1 mouse_genomes_project 1 34785508 34788263 - TEC TEC MGP_BALBcJ_T0012227.1 MGP_BALBcJ_G0010324.1 mouse_genomes_project 1 137758069 137758508 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012028.1 MGP_BALBcJ_G0010125.1 mouse_genomes_project 1 55415356 55418172 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020140.1 MGP_BALBcJ_G0016026.1 mouse_genomes_project 1 61262104 61303738 + MGP_BALBcJ_P0020140 Zdbf2 protein_coding protein_coding MGP_BALBcJ_T0020141.1 MGP_BALBcJ_G0016026.1 mouse_genomes_project 1 61262108 61284499 + MGP_BALBcJ_P0020141 Zdbf2 protein_coding protein_coding MGP_BALBcJ_T0020142.1 MGP_BALBcJ_G0016026.1 mouse_genomes_project 1 61279859 61303737 + MGP_BALBcJ_P0020142 Zdbf2 protein_coding protein_coding MGP_BALBcJ_T0011877.1 MGP_BALBcJ_G0009974.1 mouse_genomes_project 1 10439236 10439877 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018661.1 MGP_BALBcJ_G0015746.1 mouse_genomes_project 1 1333745 1451793 - MGP_BALBcJ_P0018661 Rp1 protein_coding protein_coding MGP_BALBcJ_T0018662.1 MGP_BALBcJ_G0015746.1 mouse_genomes_project 1 1386895 1403064 - MGP_BALBcJ_P0018662 Rp1 protein_coding protein_coding MGP_BALBcJ_T0023760.1 MGP_BALBcJ_G0016798.1 mouse_genomes_project 1 179172516 179193779 + MGP_BALBcJ_P0023760 Sccpdh protein_coding protein_coding MGP_BALBcJ_T0023761.1 MGP_BALBcJ_G0016798.1 mouse_genomes_project 1 179172516 179193779 + MGP_BALBcJ_P0023761 Sccpdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023762.1 MGP_BALBcJ_G0016798.1 mouse_genomes_project 1 179172566 179183953 + Sccpdh protein_coding retained_intron MGP_BALBcJ_T0023763.1 MGP_BALBcJ_G0016798.1 mouse_genomes_project 1 179186921 179193415 + MGP_BALBcJ_P0023763 Sccpdh protein_coding protein_coding MGP_BALBcJ_T0023764.1 MGP_BALBcJ_G0016798.1 mouse_genomes_project 1 179186950 179191081 + MGP_BALBcJ_P0023764 Sccpdh protein_coding protein_coding MGP_BALBcJ_T0023765.1 MGP_BALBcJ_G0016798.1 mouse_genomes_project 1 179190434 179193423 + Sccpdh protein_coding retained_intron MGP_BALBcJ_T0005955.1 MGP_BALBcJ_G0004991.1 mouse_genomes_project 1 164729115 164730337 + Gm37073 lincRNA lincRNA MGP_BALBcJ_T0100408.1 MGP_BALBcJ_G0038444.1 mouse_genomes_project 1 172049231 172049354 - Gm26077 snoRNA snoRNA MGP_BALBcJ_T0000359.1 MGP_BALBcJ_G0000300.1 mouse_genomes_project 1 5555717 5559249 - TEC TEC MGP_BALBcJ_T0000440.1 MGP_BALBcJ_G0000378.1 mouse_genomes_project 1 34216687 34220240 - TEC TEC MGP_BALBcJ_T0022896.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160004726 160007908 + Serpinc1 protein_coding retained_intron MGP_BALBcJ_T0022897.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160004747 160023510 + MGP_BALBcJ_P0022897 Serpinc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022898.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160004787 160032897 + MGP_BALBcJ_P0022898 Serpinc1 protein_coding protein_coding MGP_BALBcJ_T0022899.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160004793 160019802 + MGP_BALBcJ_P0022899 Serpinc1 protein_coding protein_coding MGP_BALBcJ_T0022900.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160004829 160015920 + MGP_BALBcJ_P0022900 Serpinc1 protein_coding protein_coding MGP_BALBcJ_T0022901.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160010909 160023539 + MGP_BALBcJ_P0022901 Serpinc1 protein_coding protein_coding MGP_BALBcJ_T0022902.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160013193 160016010 + Serpinc1 protein_coding retained_intron MGP_BALBcJ_T0022903.1 MGP_BALBcJ_G0016587.1 mouse_genomes_project 1 160015638 160029495 + MGP_BALBcJ_P0022903 Serpinc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098423.1 MGP_BALBcJ_G0036477.1 mouse_genomes_project 1 75159985 75160079 + Gm25974 rRNA rRNA MGP_BALBcJ_T0100371.1 MGP_BALBcJ_G0038407.1 mouse_genomes_project 1 108130130 108130260 - Gm22159 snoRNA snoRNA MGP_BALBcJ_T0022951.1 MGP_BALBcJ_G0016596.1 mouse_genomes_project 1 160832167 160839958 - MGP_BALBcJ_P0022951 Fasl protein_coding protein_coding MGP_BALBcJ_T0022952.1 MGP_BALBcJ_G0016596.1 mouse_genomes_project 1 160832901 160839821 - MGP_BALBcJ_P0022952 Fasl protein_coding protein_coding MGP_BALBcJ_T0098781.1 MGP_BALBcJ_G0036835.1 mouse_genomes_project 1 677779 689346 - Gm19938 sense_intronic sense_intronic MGP_BALBcJ_T0021068.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85663609 85750891 + MGP_BALBcJ_P0021068 Neu2 protein_coding protein_coding MGP_BALBcJ_T0021069.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85726737 85752059 + MGP_BALBcJ_P0021069 Neu2 protein_coding protein_coding MGP_BALBcJ_T0021070.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85726737 85752042 + MGP_BALBcJ_P0021070 Neu2 protein_coding protein_coding MGP_BALBcJ_T0021071.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85726756 85750786 + MGP_BALBcJ_P0021071 Neu2 protein_coding protein_coding MGP_BALBcJ_T0021072.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85738056 85752066 + MGP_BALBcJ_P0021072 Neu2 protein_coding protein_coding MGP_BALBcJ_T0021073.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85748770 85752042 + MGP_BALBcJ_P0021073 Neu2 protein_coding protein_coding MGP_BALBcJ_T0021074.1 MGP_BALBcJ_G0016205.1 mouse_genomes_project 1 85748770 85752048 + MGP_BALBcJ_P0021074 Neu2 protein_coding protein_coding MGP_BALBcJ_T0023422.1 MGP_BALBcJ_G0016700.1 mouse_genomes_project 1 170440940 170459419 + MGP_BALBcJ_P0023422 Nectin4 protein_coding protein_coding MGP_BALBcJ_T0023423.1 MGP_BALBcJ_G0016700.1 mouse_genomes_project 1 170441193 170459730 + MGP_BALBcJ_P0023423 Nectin4 protein_coding protein_coding MGP_BALBcJ_T0023424.1 MGP_BALBcJ_G0016700.1 mouse_genomes_project 1 170441196 170459417 + MGP_BALBcJ_P0023424 Nectin4 protein_coding protein_coding MGP_BALBcJ_T0023108.1 MGP_BALBcJ_G0016632.1 mouse_genomes_project 1 164215756 164241322 - MGP_BALBcJ_P0023108 Tiprl protein_coding protein_coding MGP_BALBcJ_T0023109.1 MGP_BALBcJ_G0016632.1 mouse_genomes_project 1 164219052 164219998 - Tiprl protein_coding retained_intron MGP_BALBcJ_T0023110.1 MGP_BALBcJ_G0016632.1 mouse_genomes_project 1 164219196 164241375 - MGP_BALBcJ_P0023110 Tiprl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023111.1 MGP_BALBcJ_G0016632.1 mouse_genomes_project 1 164225715 164241301 - Tiprl protein_coding processed_transcript MGP_BALBcJ_T0023112.1 MGP_BALBcJ_G0016632.1 mouse_genomes_project 1 164231709 164240892 - MGP_BALBcJ_P0023112 Tiprl protein_coding protein_coding MGP_BALBcJ_T0023113.1 MGP_BALBcJ_G0016632.1 mouse_genomes_project 1 164232568 164241311 - Tiprl protein_coding processed_transcript MGP_BALBcJ_T0024056.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186595213 186755845 - MGP_BALBcJ_P0024056 Spata17 protein_coding protein_coding MGP_BALBcJ_T0024057.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186598976 186755826 - MGP_BALBcJ_P0024057 Spata17 protein_coding protein_coding MGP_BALBcJ_T0024058.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186654008 186686414 - MGP_BALBcJ_P0024058 Spata17 protein_coding protein_coding MGP_BALBcJ_T0024059.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186658804 186755817 - MGP_BALBcJ_P0024059 Spata17 protein_coding protein_coding MGP_BALBcJ_T0024060.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186678801 186686604 - MGP_BALBcJ_P0024060 Spata17 protein_coding protein_coding MGP_BALBcJ_T0024061.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186678801 186755801 - MGP_BALBcJ_P0024061 Spata17 protein_coding protein_coding MGP_BALBcJ_T0024062.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186678808 186686591 - Spata17 protein_coding processed_transcript MGP_BALBcJ_T0024063.1 MGP_BALBcJ_G0016859.1 mouse_genomes_project 1 186732050 186755826 - Spata17 protein_coding processed_transcript MGP_BALBcJ_T0000690.1 MGP_BALBcJ_G0000626.1 mouse_genomes_project 1 156018237 156020560 + TEC TEC MGP_BALBcJ_T0000728.1 MGP_BALBcJ_G0000664.1 mouse_genomes_project 1 167336065 167337757 - TEC TEC MGP_BALBcJ_T0020155.1 MGP_BALBcJ_G0016028.1 mouse_genomes_project 1 61618929 61686811 - MGP_BALBcJ_P0020155 Dytn protein_coding protein_coding MGP_BALBcJ_T0020156.1 MGP_BALBcJ_G0016028.1 mouse_genomes_project 1 61664075 61686794 - Dytn protein_coding retained_intron MGP_BALBcJ_T0019118.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961156 30965134 + Rab23 protein_coding processed_transcript MGP_BALBcJ_T0019119.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961156 30968188 + Rab23 protein_coding retained_intron MGP_BALBcJ_T0019120.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961164 30985506 + MGP_BALBcJ_P0019120 Rab23 protein_coding protein_coding MGP_BALBcJ_T0019121.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961178 30985499 + MGP_BALBcJ_P0019121 Rab23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019122.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961179 30966773 + Rab23 protein_coding retained_intron MGP_BALBcJ_T0019123.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961407 30976954 + Rab23 protein_coding retained_intron MGP_BALBcJ_T0019124.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30961676 30985503 + MGP_BALBcJ_P0019124 Rab23 protein_coding protein_coding MGP_BALBcJ_T0019125.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30976127 30983653 + Rab23 protein_coding retained_intron MGP_BALBcJ_T0019126.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30978613 30982312 + Rab23 protein_coding retained_intron MGP_BALBcJ_T0019127.1 MGP_BALBcJ_G0015840.1 mouse_genomes_project 1 30981078 30983714 + Rab23 protein_coding retained_intron MGP_BALBcJ_T0000405.1 MGP_BALBcJ_G0000344.1 mouse_genomes_project 1 22780725 22783566 - TEC TEC MGP_BALBcJ_T0012297.1 MGP_BALBcJ_G0010394.1 mouse_genomes_project 1 165757310 165759575 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023750.1 MGP_BALBcJ_G0016795.1 mouse_genomes_project 1 179034994 179053207 - MGP_BALBcJ_P0023750 Tfb2m protein_coding protein_coding MGP_BALBcJ_T0023752.1 MGP_BALBcJ_G0016795.1 mouse_genomes_project 1 179035871 179040607 - Tfb2m protein_coding processed_transcript MGP_BALBcJ_T0023753.1 MGP_BALBcJ_G0016795.1 mouse_genomes_project 1 179036232 179040637 - Tfb2m protein_coding processed_transcript MGP_BALBcJ_T0023754.1 MGP_BALBcJ_G0016795.1 mouse_genomes_project 1 179038267 179053157 - Tfb2m protein_coding processed_transcript MGP_BALBcJ_T0023755.1 MGP_BALBcJ_G0016795.1 mouse_genomes_project 1 179040594 179052832 - Tfb2m protein_coding processed_transcript MGP_BALBcJ_T0023676.1 MGP_BALBcJ_G0016779.1 mouse_genomes_project 1 175224080 175225977 + MGP_BALBcJ_P0023676 Gm38100 protein_coding protein_coding MGP_BALBcJ_T0023677.1 MGP_BALBcJ_G0016779.1 mouse_genomes_project 1 175224121 175225450 + MGP_BALBcJ_P0023677 Gm38100 protein_coding protein_coding MGP_BALBcJ_T0005669.1 MGP_BALBcJ_G0004774.1 mouse_genomes_project 1 39147471 39308491 + Gm29260 lincRNA lincRNA MGP_BALBcJ_T0005670.1 MGP_BALBcJ_G0004774.1 mouse_genomes_project 1 39287066 39288794 + Gm29260 lincRNA lincRNA MGP_BALBcJ_T0023149.1 MGP_BALBcJ_G0016639.1 mouse_genomes_project 1 164774036 164785877 + MGP_BALBcJ_P0023149 Creg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023150.1 MGP_BALBcJ_G0016639.1 mouse_genomes_project 1 164774036 164785877 + MGP_BALBcJ_P0023150 Creg1 protein_coding protein_coding MGP_BALBcJ_T0023151.1 MGP_BALBcJ_G0016639.1 mouse_genomes_project 1 164779727 164784487 + MGP_BALBcJ_P0023151 Creg1 protein_coding protein_coding MGP_BALBcJ_T0000656.1 MGP_BALBcJ_G0000592.1 mouse_genomes_project 1 139159100 139162466 + TEC TEC MGP_BALBcJ_T0020367.1 MGP_BALBcJ_G0016073.1 mouse_genomes_project 1 70740192 70743507 + MGP_BALBcJ_P0020367 Rpl37a protein_coding protein_coding MGP_BALBcJ_T0020368.1 MGP_BALBcJ_G0016073.1 mouse_genomes_project 1 70740212 70742498 + MGP_BALBcJ_P0020368 Rpl37a protein_coding unknown_likely_coding MGP_BALBcJ_T0005706.1 MGP_BALBcJ_G0004795.1 mouse_genomes_project 1 50160504 50170795 - Gm28178 lincRNA lincRNA MGP_BALBcJ_T0099097.1 MGP_BALBcJ_G0037133.1 mouse_genomes_project 1 67949359 67949485 - Gm23879 snRNA snRNA MGP_BALBcJ_T0012337.1 MGP_BALBcJ_G0010434.1 mouse_genomes_project 1 186616853 186617178 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000538.1 MGP_BALBcJ_G0000476.1 mouse_genomes_project 1 82916536 82921586 - TEC TEC MGP_BALBcJ_T0002761.1 MGP_BALBcJ_G0002625.1 mouse_genomes_project 1 34914311 34915425 + 4930556I23Rik antisense antisense MGP_BALBcJ_T0018963.1 MGP_BALBcJ_G0015797.1 mouse_genomes_project 1 14016092 14056268 - MGP_BALBcJ_P0018963 Jph1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018964.1 MGP_BALBcJ_G0015797.1 mouse_genomes_project 1 14047101 14149104 - MGP_BALBcJ_P0018964 Jph1 protein_coding protein_coding MGP_BALBcJ_T0022262.1 MGP_BALBcJ_G0016469.1 mouse_genomes_project 1 134544194 134576749 + MGP_BALBcJ_P0022262 Csrp1 protein_coding protein_coding MGP_BALBcJ_T0022263.1 MGP_BALBcJ_G0016469.1 mouse_genomes_project 1 134553540 134576749 + MGP_BALBcJ_P0022263 Csrp1 protein_coding protein_coding MGP_BALBcJ_T0020584.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73181852 73182725 - Glb1l protein_coding processed_transcript MGP_BALBcJ_T0020585.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73181859 73194463 - MGP_BALBcJ_P0020585 Glb1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020586.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73182707 73184847 - Glb1l protein_coding retained_intron MGP_BALBcJ_T0020587.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73182963 73194463 - MGP_BALBcJ_P0020587 Glb1l protein_coding protein_coding MGP_BALBcJ_T0020588.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73183107 73193108 - MGP_BALBcJ_P0020588 Glb1l protein_coding protein_coding MGP_BALBcJ_T0020589.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73183107 73186565 - MGP_BALBcJ_P0020589 Glb1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020590.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73183445 73193179 - Glb1l protein_coding retained_intron MGP_BALBcJ_T0020591.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73183709 73184923 - Glb1l protein_coding retained_intron MGP_BALBcJ_T0020592.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73184626 73185970 - Glb1l protein_coding retained_intron MGP_BALBcJ_T0020593.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73184880 73185498 - Glb1l protein_coding retained_intron MGP_BALBcJ_T0020594.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73186393 73194498 - MGP_BALBcJ_P0020594 Glb1l protein_coding protein_coding MGP_BALBcJ_T0020595.1 MGP_BALBcJ_G0016115.1 mouse_genomes_project 1 73191741 73194438 - Glb1l protein_coding retained_intron MGP_BALBcJ_T0020929.1 MGP_BALBcJ_G0016174.1 mouse_genomes_project 1 84012032 84026430 + MGP_BALBcJ_P0020929 Itm2c protein_coding protein_coding MGP_BALBcJ_T0020930.1 MGP_BALBcJ_G0016174.1 mouse_genomes_project 1 84012370 84026114 + MGP_BALBcJ_P0020930 Itm2c protein_coding protein_coding MGP_BALBcJ_T0020931.1 MGP_BALBcJ_G0016174.1 mouse_genomes_project 1 84023915 84025546 + Itm2c protein_coding retained_intron MGP_BALBcJ_T0021554.1 MGP_BALBcJ_G0016312.1 mouse_genomes_project 1 105181455 105218941 - MGP_BALBcJ_P0021554 Kdsr protein_coding protein_coding MGP_BALBcJ_T0021555.1 MGP_BALBcJ_G0016312.1 mouse_genomes_project 1 105206499 105218913 - Kdsr protein_coding retained_intron MGP_BALBcJ_T0021556.1 MGP_BALBcJ_G0016312.1 mouse_genomes_project 1 105216315 105218897 - Kdsr protein_coding retained_intron MGP_BALBcJ_T0000349.1 MGP_BALBcJ_G0000290.1 mouse_genomes_project 1 795455 797806 + TEC TEC MGP_BALBcJ_T0023661.1 MGP_BALBcJ_G0016777.1 mouse_genomes_project 1 175009641 175055438 + Wdr64 protein_coding processed_transcript MGP_BALBcJ_T0023662.1 MGP_BALBcJ_G0016777.1 mouse_genomes_project 1 175009641 175126753 + MGP_BALBcJ_P0023662 Wdr64 protein_coding protein_coding MGP_BALBcJ_T0023663.1 MGP_BALBcJ_G0016777.1 mouse_genomes_project 1 175009641 175126753 + MGP_BALBcJ_P0023663 Wdr64 protein_coding protein_coding MGP_BALBcJ_T0023664.1 MGP_BALBcJ_G0016777.1 mouse_genomes_project 1 175009837 175126385 + MGP_BALBcJ_P0023664 Wdr64 protein_coding protein_coding MGP_BALBcJ_T0023665.1 MGP_BALBcJ_G0016777.1 mouse_genomes_project 1 175079038 175126750 + MGP_BALBcJ_P0023665 Wdr64 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012268.1 MGP_BALBcJ_G0010365.1 mouse_genomes_project 1 154173224 154173805 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012020.1 MGP_BALBcJ_G0010117.1 mouse_genomes_project 1 52981743 52982531 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005777.1 MGP_BALBcJ_G0004848.1 mouse_genomes_project 1 76872019 76873414 + Gm29187 lincRNA lincRNA MGP_BALBcJ_T0019416.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36166394 36208197 - MGP_BALBcJ_P0019416 Chst10 protein_coding protein_coding MGP_BALBcJ_T0019417.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36166394 36208276 - MGP_BALBcJ_P0019417 Chst10 protein_coding protein_coding MGP_BALBcJ_T0019418.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36166402 36174739 - MGP_BALBcJ_P0019418 Chst10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019419.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36166404 36208348 - MGP_BALBcJ_P0019419 Chst10 protein_coding protein_coding MGP_BALBcJ_T0019420.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36173159 36208340 - MGP_BALBcJ_P0019420 Chst10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019421.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36177697 36208321 - MGP_BALBcJ_P0019421 Chst10 protein_coding protein_coding MGP_BALBcJ_T0019422.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36200789 36208173 - Chst10 protein_coding retained_intron MGP_BALBcJ_T0019423.1 MGP_BALBcJ_G0015890.1 mouse_genomes_project 1 36200790 36208197 - Chst10 protein_coding retained_intron MGP_BALBcJ_T0005751.1 MGP_BALBcJ_G0004829.1 mouse_genomes_project 1 70010226 70065032 - 4930556G22Rik lincRNA lincRNA MGP_BALBcJ_T0018657.1 MGP_BALBcJ_G0015744.1 mouse_genomes_project 1 227239 237686 - Xkr4 protein_coding processed_transcript MGP_BALBcJ_T0018658.1 MGP_BALBcJ_G0015744.1 mouse_genomes_project 1 227861 236974 - Xkr4 protein_coding processed_transcript MGP_BALBcJ_T0018659.1 MGP_BALBcJ_G0015744.1 mouse_genomes_project 1 235823 701935 - MGP_BALBcJ_P0018659 Xkr4 protein_coding protein_coding MGP_BALBcJ_T0000453.1 MGP_BALBcJ_G0000391.1 mouse_genomes_project 1 40023391 40024067 + TEC TEC MGP_BALBcJ_T0000641.1 MGP_BALBcJ_G0000578.1 mouse_genomes_project 1 136769987 136771979 + TEC TEC MGP_BALBcJ_T0016936.1 MGP_BALBcJ_G0015027.1 mouse_genomes_project 1 31720543 31722158 - Gm28417 processed_transcript retained_intron MGP_BALBcJ_T0016937.1 MGP_BALBcJ_G0015027.1 mouse_genomes_project 1 31721878 31725074 - Gm28417 processed_transcript antisense MGP_BALBcJ_T0016938.1 MGP_BALBcJ_G0015027.1 mouse_genomes_project 1 31723467 31725038 - Gm28417 processed_transcript antisense MGP_BALBcJ_T0009448.1 MGP_BALBcJ_G0007573.1 mouse_genomes_project 1 26703447 26703572 + Mir6342 miRNA miRNA MGP_BALBcJ_T0100324.1 MGP_BALBcJ_G0038360.1 mouse_genomes_project 1 16588842 16588907 - Gm24633 snoRNA snoRNA MGP_BALBcJ_T0005989.1 MGP_BALBcJ_G0005019.1 mouse_genomes_project 1 181406600 181408216 - Gm5533 lincRNA lincRNA MGP_BALBcJ_T0000445.1 MGP_BALBcJ_G0000383.1 mouse_genomes_project 1 34996598 34998816 - TEC TEC MGP_BALBcJ_T0100392.1 MGP_BALBcJ_G0038428.1 mouse_genomes_project 1 159901009 159901130 - Gm24988 snoRNA snoRNA MGP_BALBcJ_T0011869.1 MGP_BALBcJ_G0009966.1 mouse_genomes_project 1 7769841 7770349 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000759.1 MGP_BALBcJ_G0000694.1 mouse_genomes_project 1 179874097 179877168 + TEC TEC MGP_BALBcJ_T0011888.1 MGP_BALBcJ_G0009985.1 mouse_genomes_project 1 15003918 15005317 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099126.1 MGP_BALBcJ_G0037162.1 mouse_genomes_project 1 134169707 134169813 - Gm22796 snRNA snRNA MGP_BALBcJ_T0002910.1 MGP_BALBcJ_G0002739.1 mouse_genomes_project 1 161017525 161079133 + Gm38304 antisense antisense MGP_BALBcJ_T0005880.1 MGP_BALBcJ_G0004933.1 mouse_genomes_project 1 132629749 132633091 + Gm28441 lincRNA lincRNA MGP_BALBcJ_T0023301.1 MGP_BALBcJ_G0016678.1 mouse_genomes_project 1 169923995 169934546 - MGP_BALBcJ_P0023301 Fcrla protein_coding protein_coding MGP_BALBcJ_T0023302.1 MGP_BALBcJ_G0016678.1 mouse_genomes_project 1 169924294 169928853 - MGP_BALBcJ_P0023302 Fcrla protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023303.1 MGP_BALBcJ_G0016678.1 mouse_genomes_project 1 169924300 169934546 - MGP_BALBcJ_P0023303 Fcrla protein_coding protein_coding MGP_BALBcJ_T0023304.1 MGP_BALBcJ_G0016678.1 mouse_genomes_project 1 169927378 169934518 - MGP_BALBcJ_P0023304 Fcrla protein_coding protein_coding MGP_BALBcJ_T0023305.1 MGP_BALBcJ_G0016678.1 mouse_genomes_project 1 169928080 169934523 - MGP_BALBcJ_P0023305 Fcrla protein_coding protein_coding MGP_BALBcJ_T0023306.1 MGP_BALBcJ_G0016678.1 mouse_genomes_project 1 169928100 169934497 - Fcrla protein_coding processed_transcript MGP_BALBcJ_T0023047.1 MGP_BALBcJ_G0016615.1 mouse_genomes_project 1 162785248 162924759 + MGP_BALBcJ_P0023047 Kifap3 protein_coding protein_coding MGP_BALBcJ_T0023048.1 MGP_BALBcJ_G0016615.1 mouse_genomes_project 1 162785248 162924759 + MGP_BALBcJ_P0023048 Kifap3 protein_coding protein_coding MGP_BALBcJ_T0024305.1 MGP_BALBcJ_G0016904.1 mouse_genomes_project 1 194618703 194664757 - MGP_BALBcJ_P0024305 Cd46 protein_coding protein_coding MGP_BALBcJ_T0024306.1 MGP_BALBcJ_G0016904.1 mouse_genomes_project 1 194623713 194639424 - Cd46 protein_coding retained_intron MGP_BALBcJ_T0024307.1 MGP_BALBcJ_G0016904.1 mouse_genomes_project 1 194623778 194664733 - MGP_BALBcJ_P0024307 Cd46 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024308.1 MGP_BALBcJ_G0016904.1 mouse_genomes_project 1 194623801 194655788 - Cd46 protein_coding retained_intron MGP_BALBcJ_T0019536.1 MGP_BALBcJ_G0015919.1 mouse_genomes_project 1 41117357 41129333 + MGP_BALBcJ_P0019536 1500015O10Rik protein_coding protein_coding MGP_BALBcJ_T0021573.1 MGP_BALBcJ_G0016318.1 mouse_genomes_project 1 105764969 105797946 - MGP_BALBcJ_P0021573 protein_coding protein_coding MGP_BALBcJ_T0021574.1 MGP_BALBcJ_G0016318.1 mouse_genomes_project 1 105764987 105797944 - MGP_BALBcJ_P0021574 protein_coding protein_coding MGP_BALBcJ_T0011939.1 MGP_BALBcJ_G0010036.1 mouse_genomes_project 1 30603021 30605279 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020510.1 MGP_BALBcJ_G0016098.1 mouse_genomes_project 1 72753035 72778422 + MGP_BALBcJ_P0020510 Cyp27a1 protein_coding protein_coding MGP_BALBcJ_T0020511.1 MGP_BALBcJ_G0016098.1 mouse_genomes_project 1 72775880 72777246 + Cyp27a1 protein_coding retained_intron MGP_BALBcJ_T0020512.1 MGP_BALBcJ_G0016098.1 mouse_genomes_project 1 72777338 72778353 + Cyp27a1 protein_coding retained_intron MGP_BALBcJ_T0019284.1 MGP_BALBcJ_G0015868.1 mouse_genomes_project 1 33980467 33983919 + MGP_BALBcJ_P0019284 Cox5b protein_coding protein_coding MGP_BALBcJ_T0019285.1 MGP_BALBcJ_G0015868.1 mouse_genomes_project 1 33980593 33983624 + MGP_BALBcJ_P0019285 Cox5b protein_coding protein_coding MGP_BALBcJ_T0019286.1 MGP_BALBcJ_G0015868.1 mouse_genomes_project 1 33980611 33981534 + Cox5b protein_coding retained_intron MGP_BALBcJ_T0019287.1 MGP_BALBcJ_G0015868.1 mouse_genomes_project 1 33980625 33981491 + Cox5b protein_coding retained_intron MGP_BALBcJ_T0019288.1 MGP_BALBcJ_G0015868.1 mouse_genomes_project 1 33980627 33983623 + Cox5b protein_coding processed_transcript MGP_BALBcJ_T0019289.1 MGP_BALBcJ_G0015868.1 mouse_genomes_project 1 33980671 33983624 + MGP_BALBcJ_P0019289 Cox5b protein_coding protein_coding MGP_BALBcJ_T0023314.1 MGP_BALBcJ_G0016680.1 mouse_genomes_project 1 170037452 170048277 + MGP_BALBcJ_P0023314 Fcgr4 protein_coding protein_coding MGP_BALBcJ_T0000751.1 MGP_BALBcJ_G0000687.1 mouse_genomes_project 1 176947504 176948735 - TEC TEC MGP_BALBcJ_T0023565.1 MGP_BALBcJ_G0016732.1 mouse_genomes_project 1 171672696 171680305 + MGP_BALBcJ_P0023565 Vsig8 protein_coding protein_coding MGP_BALBcJ_T0023566.1 MGP_BALBcJ_G0016732.1 mouse_genomes_project 1 171676551 171680304 + MGP_BALBcJ_P0023566 Vsig8 protein_coding protein_coding MGP_BALBcJ_T0005960.1 MGP_BALBcJ_G0004996.1 mouse_genomes_project 1 165965511 165985256 - Gm16701 lincRNA lincRNA MGP_BALBcJ_T0024201.1 MGP_BALBcJ_G0016887.1 mouse_genomes_project 1 191560167 191571389 + MGP_BALBcJ_P0024201 Rd3 protein_coding protein_coding MGP_BALBcJ_T0024202.1 MGP_BALBcJ_G0016887.1 mouse_genomes_project 1 191560170 191569190 + MGP_BALBcJ_P0024202 Rd3 protein_coding protein_coding MGP_BALBcJ_T0024203.1 MGP_BALBcJ_G0016887.1 mouse_genomes_project 1 191561048 191569189 + MGP_BALBcJ_P0024203 Rd3 protein_coding protein_coding MGP_BALBcJ_T0024204.1 MGP_BALBcJ_G0016887.1 mouse_genomes_project 1 191566967 191569190 + Rd3 protein_coding retained_intron MGP_BALBcJ_T0020746.1 MGP_BALBcJ_G0016135.1 mouse_genomes_project 1 76343810 76454481 + MGP_BALBcJ_P0020746 Sgpp2 protein_coding protein_coding MGP_BALBcJ_T0000702.1 MGP_BALBcJ_G0000638.1 mouse_genomes_project 1 159600887 159604517 - TEC TEC MGP_BALBcJ_T0021610.1 MGP_BALBcJ_G0016332.1 mouse_genomes_project 1 116915759 116932206 - MGP_BALBcJ_P0021610 Tsn protein_coding protein_coding MGP_BALBcJ_T0021611.1 MGP_BALBcJ_G0016332.1 mouse_genomes_project 1 116920631 116931028 - Tsn protein_coding retained_intron MGP_BALBcJ_T0021612.1 MGP_BALBcJ_G0016332.1 mouse_genomes_project 1 116921870 116930777 - Tsn protein_coding retained_intron MGP_BALBcJ_T0021613.1 MGP_BALBcJ_G0016332.1 mouse_genomes_project 1 116925485 116932252 - Tsn protein_coding processed_transcript MGP_BALBcJ_T0021614.1 MGP_BALBcJ_G0016332.1 mouse_genomes_project 1 116929497 116932026 - Tsn protein_coding retained_intron MGP_BALBcJ_T0021615.1 MGP_BALBcJ_G0016332.1 mouse_genomes_project 1 116931470 116932912 - Tsn protein_coding retained_intron MGP_BALBcJ_T0020277.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64894086 64916705 - MGP_BALBcJ_P0020277 Myl1 protein_coding protein_coding MGP_BALBcJ_T0020278.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64894086 64905466 - MGP_BALBcJ_P0020278 Myl1 protein_coding protein_coding MGP_BALBcJ_T0020279.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64894089 64905183 - MGP_BALBcJ_P0020279 Myl1 protein_coding protein_coding MGP_BALBcJ_T0020280.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64894814 64905179 - Myl1 protein_coding processed_transcript MGP_BALBcJ_T0020281.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64895857 64905162 - MGP_BALBcJ_P0020281 Myl1 protein_coding protein_coding MGP_BALBcJ_T0020282.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64896413 64916946 - MGP_BALBcJ_P0020282 Myl1 protein_coding protein_coding MGP_BALBcJ_T0020283.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64900020 64904527 - Myl1 protein_coding retained_intron MGP_BALBcJ_T0020284.1 MGP_BALBcJ_G0016055.1 mouse_genomes_project 1 64916024 64916966 - Myl1 protein_coding retained_intron MGP_BALBcJ_T0005827.1 MGP_BALBcJ_G0004891.1 mouse_genomes_project 1 96623144 96640198 + Gm29461 lincRNA lincRNA MGP_BALBcJ_T0023442.1 MGP_BALBcJ_G0016704.1 mouse_genomes_project 1 170508671 170536057 + MGP_BALBcJ_P0023442 F11r protein_coding protein_coding MGP_BALBcJ_T0023443.1 MGP_BALBcJ_G0016704.1 mouse_genomes_project 1 170508715 170532168 + F11r protein_coding retained_intron MGP_BALBcJ_T0023444.1 MGP_BALBcJ_G0016704.1 mouse_genomes_project 1 170534303 170535098 + F11r protein_coding retained_intron MGP_BALBcJ_T0099137.1 MGP_BALBcJ_G0037173.1 mouse_genomes_project 1 150237525 150237616 - Gm24402 snRNA snRNA MGP_BALBcJ_T0101599.1 MGP_BALBcJ_G0039623.1 mouse_genomes_project 1 185006342 185017163 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101600.1 MGP_BALBcJ_G0039623.1 mouse_genomes_project 1 185016391 185017021 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0018969.1 MGP_BALBcJ_G0015799.1 mouse_genomes_project 1 14656688 14686031 + MGP_BALBcJ_P0018969 Pi15 protein_coding protein_coding MGP_BALBcJ_T0012065.1 MGP_BALBcJ_G0010162.1 mouse_genomes_project 1 64750773 64753306 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024195.1 MGP_BALBcJ_G0016885.1 mouse_genomes_project 1 191412522 191424177 + MGP_BALBcJ_P0024195 Nek2 protein_coding protein_coding MGP_BALBcJ_T0024196.1 MGP_BALBcJ_G0016885.1 mouse_genomes_project 1 191412588 191419418 + Nek2 protein_coding retained_intron MGP_BALBcJ_T0024197.1 MGP_BALBcJ_G0016885.1 mouse_genomes_project 1 191413260 191416949 + Nek2 protein_coding retained_intron MGP_BALBcJ_T0024198.1 MGP_BALBcJ_G0016885.1 mouse_genomes_project 1 191418271 191421114 + Nek2 protein_coding processed_transcript MGP_BALBcJ_T0011241.1 MGP_BALBcJ_G0009366.1 mouse_genomes_project 1 192544885 192545174 - Gm23583 misc_RNA misc_RNA MGP_BALBcJ_T0000661.1 MGP_BALBcJ_G0000597.1 mouse_genomes_project 1 144191953 144195583 - TEC TEC MGP_BALBcJ_T0018695.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2118031 2199623 + MGP_BALBcJ_P0018695 Atp6v1h protein_coding protein_coding MGP_BALBcJ_T0018696.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125558 2199812 + MGP_BALBcJ_P0018696 Atp6v1h protein_coding protein_coding MGP_BALBcJ_T0018697.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125588 2138262 + MGP_BALBcJ_P0018697 Atp6v1h protein_coding protein_coding MGP_BALBcJ_T0018698.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125602 2182231 + Atp6v1h protein_coding retained_intron MGP_BALBcJ_T0018699.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125610 2129299 + Atp6v1h protein_coding retained_intron MGP_BALBcJ_T0018700.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125610 2138193 + MGP_BALBcJ_P0018700 Atp6v1h protein_coding protein_coding MGP_BALBcJ_T0018701.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125632 2199702 + MGP_BALBcJ_P0018701 Atp6v1h protein_coding protein_coding MGP_BALBcJ_T0018702.1 MGP_BALBcJ_G0015753.1 mouse_genomes_project 1 2125642 2142313 + Atp6v1h protein_coding retained_intron MGP_BALBcJ_T0011966.1 MGP_BALBcJ_G0010063.1 mouse_genomes_project 1 39474358 39475403 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016934.1 MGP_BALBcJ_G0015026.1 mouse_genomes_project 1 31414628 31427044 - Gm26788 processed_transcript antisense MGP_BALBcJ_T0016935.1 MGP_BALBcJ_G0015026.1 mouse_genomes_project 1 31423803 31427219 - Gm26788 processed_transcript retained_intron MGP_BALBcJ_T0102089.1 MGP_BALBcJ_G0039906.1 mouse_genomes_project 1 158227597 158230828 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005874.1 MGP_BALBcJ_G0004927.1 mouse_genomes_project 1 129531278 129549615 + Gm28856 lincRNA lincRNA MGP_BALBcJ_T0100343.1 MGP_BALBcJ_G0038379.1 mouse_genomes_project 1 57004232 57004363 + Gm25502 snoRNA snoRNA MGP_BALBcJ_T0020641.1 MGP_BALBcJ_G0016121.1 mouse_genomes_project 1 73255889 73262066 - MGP_BALBcJ_P0020641 Resp18 protein_coding protein_coding MGP_BALBcJ_T0020642.1 MGP_BALBcJ_G0016121.1 mouse_genomes_project 1 73255891 73257954 - Resp18 protein_coding retained_intron MGP_BALBcJ_T0020643.1 MGP_BALBcJ_G0016121.1 mouse_genomes_project 1 73256001 73261967 - MGP_BALBcJ_P0020643 Resp18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020644.1 MGP_BALBcJ_G0016121.1 mouse_genomes_project 1 73257760 73261935 - Resp18 protein_coding retained_intron MGP_BALBcJ_T0000478.1 MGP_BALBcJ_G0000416.1 mouse_genomes_project 1 58308890 58309947 + TEC TEC MGP_BALBcJ_T0022380.1 MGP_BALBcJ_G0016492.1 mouse_genomes_project 1 137694622 137699492 - MGP_BALBcJ_P0022380 2310009B15Rik protein_coding protein_coding MGP_BALBcJ_T0022381.1 MGP_BALBcJ_G0016492.1 mouse_genomes_project 1 137694623 137696990 - 2310009B15Rik protein_coding retained_intron MGP_BALBcJ_T0022382.1 MGP_BALBcJ_G0016492.1 mouse_genomes_project 1 137694672 137699487 - MGP_BALBcJ_P0022382 2310009B15Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005805.1 MGP_BALBcJ_G0004871.1 mouse_genomes_project 1 88642180 88645635 + Gm28723 lincRNA lincRNA MGP_BALBcJ_T0002923.1 MGP_BALBcJ_G0002748.1 mouse_genomes_project 1 165312176 165315021 - 5330438I03Rik antisense antisense MGP_BALBcJ_T0023811.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179727792 179730851 - Psen2 protein_coding processed_transcript MGP_BALBcJ_T0023812.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179727792 179754371 - MGP_BALBcJ_P0023812 Psen2 protein_coding protein_coding MGP_BALBcJ_T0023813.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179727792 179751209 - MGP_BALBcJ_P0023813 Psen2 protein_coding protein_coding MGP_BALBcJ_T0023814.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179727794 179730354 - Psen2 protein_coding retained_intron MGP_BALBcJ_T0023815.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179727794 179744027 - MGP_BALBcJ_P0023815 Psen2 protein_coding protein_coding MGP_BALBcJ_T0023816.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179728177 179730848 - Psen2 protein_coding processed_transcript MGP_BALBcJ_T0023817.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179728231 179746227 - MGP_BALBcJ_P0023817 Psen2 protein_coding protein_coding MGP_BALBcJ_T0023818.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179728234 179743834 - MGP_BALBcJ_P0023818 Psen2 protein_coding protein_coding MGP_BALBcJ_T0023819.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179728256 179730811 - Psen2 protein_coding processed_transcript MGP_BALBcJ_T0023820.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179733309 179754315 - Psen2 protein_coding retained_intron MGP_BALBcJ_T0023821.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179735959 179739885 - Psen2 protein_coding retained_intron MGP_BALBcJ_T0023822.1 MGP_BALBcJ_G0016804.1 mouse_genomes_project 1 179743714 179761509 - MGP_BALBcJ_P0023822 Psen2 protein_coding protein_coding MGP_BALBcJ_T0023614.1 MGP_BALBcJ_G0016756.1 mouse_genomes_project 1 173265280 173284867 - MGP_BALBcJ_P0023614 protein_coding protein_coding MGP_BALBcJ_T0005735.1 MGP_BALBcJ_G0004817.1 mouse_genomes_project 1 62022515 62025980 + Gm26649 lincRNA lincRNA MGP_BALBcJ_T0005659.1 MGP_BALBcJ_G0004766.1 mouse_genomes_project 1 33413783 33420394 + Gm33280 lincRNA lincRNA MGP_BALBcJ_T0002961.1 MGP_BALBcJ_G0002780.1 mouse_genomes_project 1 186884998 186914828 - Gm38155 antisense antisense MGP_BALBcJ_T0005813.1 MGP_BALBcJ_G0004879.1 mouse_genomes_project 1 90371427 90375030 + Gm26720 lincRNA lincRNA MGP_BALBcJ_T0006027.1 MGP_BALBcJ_G0005048.1 mouse_genomes_project 1 190712263 190713621 + Gm38161 lincRNA lincRNA MGP_BALBcJ_T0021190.1 MGP_BALBcJ_G0016235.1 mouse_genomes_project 1 89331645 89332565 + MGP_BALBcJ_P0021190 Prlh protein_coding protein_coding MGP_BALBcJ_T0023886.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180711818 180749567 - MGP_BALBcJ_P0023886 Wdr26 protein_coding protein_coding MGP_BALBcJ_T0023887.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180711822 180749477 - MGP_BALBcJ_P0023887 Wdr26 protein_coding protein_coding MGP_BALBcJ_T0023888.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180715659 180749441 - MGP_BALBcJ_P0023888 Wdr26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023889.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180716237 180722829 - MGP_BALBcJ_P0023889 Wdr26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023890.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180718969 180722302 - MGP_BALBcJ_P0023890 Wdr26 protein_coding protein_coding MGP_BALBcJ_T0023891.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180720869 180722959 - Wdr26 protein_coding processed_transcript MGP_BALBcJ_T0023892.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180725830 180730696 - Wdr26 protein_coding retained_intron MGP_BALBcJ_T0023893.1 MGP_BALBcJ_G0016821.1 mouse_genomes_project 1 180737132 180741356 - Wdr26 protein_coding retained_intron MGP_BALBcJ_T0019002.1 MGP_BALBcJ_G0015810.1 mouse_genomes_project 1 17993327 18041276 + MGP_BALBcJ_P0019002 Paqr8 protein_coding protein_coding MGP_BALBcJ_T0019003.1 MGP_BALBcJ_G0015810.1 mouse_genomes_project 1 18020237 18040679 + MGP_BALBcJ_P0019003 Paqr8 protein_coding protein_coding MGP_BALBcJ_T0019004.1 MGP_BALBcJ_G0015810.1 mouse_genomes_project 1 18020271 18037376 + MGP_BALBcJ_P0019004 Paqr8 protein_coding protein_coding MGP_BALBcJ_T0019005.1 MGP_BALBcJ_G0015810.1 mouse_genomes_project 1 18024053 18037383 + MGP_BALBcJ_P0019005 Paqr8 protein_coding protein_coding MGP_BALBcJ_T0011847.1 MGP_BALBcJ_G0009944.1 mouse_genomes_project 1 4052191 4052350 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005621.1 MGP_BALBcJ_G0004735.1 mouse_genomes_project 1 6996195 6998377 - Snhg6 lincRNA lincRNA MGP_BALBcJ_T0005622.1 MGP_BALBcJ_G0004735.1 mouse_genomes_project 1 6996259 6997489 - Snhg6 lincRNA lincRNA MGP_BALBcJ_T0005623.1 MGP_BALBcJ_G0004735.1 mouse_genomes_project 1 6996261 6998362 - Snhg6 lincRNA lincRNA MGP_BALBcJ_T0005624.1 MGP_BALBcJ_G0004735.1 mouse_genomes_project 1 6996261 6997163 - Snhg6 lincRNA lincRNA MGP_BALBcJ_T0005625.1 MGP_BALBcJ_G0004735.1 mouse_genomes_project 1 6996261 6998376 - Snhg6 lincRNA lincRNA MGP_BALBcJ_T0000695.1 MGP_BALBcJ_G0000631.1 mouse_genomes_project 1 157534051 157536669 + TEC TEC MGP_BALBcJ_T0005803.1 MGP_BALBcJ_G0004869.1 mouse_genomes_project 1 88513232 88519428 + 4930434B07Rik lincRNA lincRNA MGP_BALBcJ_T0102085.1 MGP_BALBcJ_G0039902.1 mouse_genomes_project 1 130666246 130667000 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0022877.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159247242 159384231 - MGP_BALBcJ_P0022877 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0022878.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159254106 159260062 - Rabgap1l protein_coding retained_intron MGP_BALBcJ_T0022879.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159254625 159279756 - MGP_BALBcJ_P0022879 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0022880.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159254677 159340144 - MGP_BALBcJ_P0022880 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0022881.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159254727 159319214 - Rabgap1l protein_coding processed_transcript MGP_BALBcJ_T0022882.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159264737 159276140 - Rabgap1l protein_coding retained_intron MGP_BALBcJ_T0022883.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159276123 159279062 - Rabgap1l protein_coding processed_transcript MGP_BALBcJ_T0022884.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159284473 159341975 - MGP_BALBcJ_P0022884 Rabgap1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022885.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159284834 159466706 - MGP_BALBcJ_P0022885 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0022886.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159285107 159821308 - MGP_BALBcJ_P0022886 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0022887.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159315760 159319401 - Rabgap1l protein_coding processed_transcript MGP_BALBcJ_T0022888.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159320474 159326079 - Rabgap1l protein_coding processed_transcript MGP_BALBcJ_T0022889.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159322185 159340582 - Rabgap1l protein_coding processed_transcript MGP_BALBcJ_T0022890.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159466438 159479325 - Rabgap1l protein_coding retained_intron MGP_BALBcJ_T0022891.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159699733 159821300 - MGP_BALBcJ_P0022891 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0022892.1 MGP_BALBcJ_G0016585.1 mouse_genomes_project 1 159762987 159821571 - MGP_BALBcJ_P0022892 Rabgap1l protein_coding protein_coding MGP_BALBcJ_T0020827.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821249 80848751 + MGP_BALBcJ_P0020827 Mff protein_coding protein_coding MGP_BALBcJ_T0020828.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821277 80831868 + Mff protein_coding processed_transcript MGP_BALBcJ_T0020829.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821278 80848748 + MGP_BALBcJ_P0020829 Mff protein_coding protein_coding MGP_BALBcJ_T0020830.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821284 80848751 + MGP_BALBcJ_P0020830 Mff protein_coding protein_coding MGP_BALBcJ_T0020831.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821293 80833089 + Mff protein_coding retained_intron MGP_BALBcJ_T0020832.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821299 80848711 + MGP_BALBcJ_P0020832 Mff protein_coding protein_coding MGP_BALBcJ_T0020833.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80821307 80848755 + MGP_BALBcJ_P0020833 Mff protein_coding protein_coding MGP_BALBcJ_T0020834.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80825589 80848751 + MGP_BALBcJ_P0020834 Mff protein_coding protein_coding MGP_BALBcJ_T0020835.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80825632 80848002 + MGP_BALBcJ_P0020835 Mff protein_coding protein_coding MGP_BALBcJ_T0020836.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80825686 80838245 + MGP_BALBcJ_P0020836 Mff protein_coding protein_coding MGP_BALBcJ_T0020837.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80825686 80846942 + MGP_BALBcJ_P0020837 Mff protein_coding protein_coding MGP_BALBcJ_T0020838.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80831830 80848519 + MGP_BALBcJ_P0020838 Mff protein_coding protein_coding MGP_BALBcJ_T0020839.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80837999 80848080 + Mff protein_coding retained_intron MGP_BALBcJ_T0020840.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80838338 80842256 + Mff protein_coding retained_intron MGP_BALBcJ_T0020841.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80843283 80848247 + Mff protein_coding retained_intron MGP_BALBcJ_T0020842.1 MGP_BALBcJ_G0016156.1 mouse_genomes_project 1 80844749 80848089 + Mff protein_coding retained_intron MGP_BALBcJ_T0020331.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598422 69666817 - MGP_BALBcJ_P0020331 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020332.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598425 69666817 - MGP_BALBcJ_P0020332 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020333.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598425 69666817 - MGP_BALBcJ_P0020333 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020334.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598425 69666817 - MGP_BALBcJ_P0020334 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020335.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598426 69666817 - MGP_BALBcJ_P0020335 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020336.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598426 69666845 - MGP_BALBcJ_P0020336 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020337.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598426 69666820 - MGP_BALBcJ_P0020337 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020338.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69598428 69622462 - Fn1 protein_coding retained_intron MGP_BALBcJ_T0020339.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69599763 69603974 - Fn1 protein_coding retained_intron MGP_BALBcJ_T0020340.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69602999 69613279 - MGP_BALBcJ_P0020340 Fn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020341.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69611270 69615287 - MGP_BALBcJ_P0020341 Fn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020342.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69613297 69615755 - Fn1 protein_coding retained_intron MGP_BALBcJ_T0020343.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69617007 69637239 - Fn1 protein_coding retained_intron MGP_BALBcJ_T0020344.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69642351 69654334 - MGP_BALBcJ_P0020344 Fn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020345.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69655870 69666806 - MGP_BALBcJ_P0020345 Fn1 protein_coding protein_coding MGP_BALBcJ_T0020346.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69657522 69666817 - Fn1 protein_coding retained_intron MGP_BALBcJ_T0020347.1 MGP_BALBcJ_G0016065.1 mouse_genomes_project 1 69659029 69666817 - MGP_BALBcJ_P0020347 Fn1 protein_coding protein_coding MGP_BALBcJ_T0012052.1 MGP_BALBcJ_G0010149.1 mouse_genomes_project 1 61671393 61671897 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000672.1 MGP_BALBcJ_G0000608.1 mouse_genomes_project 1 150441728 150444165 + TEC TEC MGP_BALBcJ_T0018781.1 MGP_BALBcJ_G0015767.1 mouse_genomes_project 1 6961662 6995193 + MGP_BALBcJ_P0018781 Mcmdc2 protein_coding protein_coding MGP_BALBcJ_T0018782.1 MGP_BALBcJ_G0015767.1 mouse_genomes_project 1 6961662 6975555 + MGP_BALBcJ_P0018782 Mcmdc2 protein_coding protein_coding MGP_BALBcJ_T0018783.1 MGP_BALBcJ_G0015767.1 mouse_genomes_project 1 6961692 6994693 + MGP_BALBcJ_P0018783 Mcmdc2 protein_coding protein_coding MGP_BALBcJ_T0018784.1 MGP_BALBcJ_G0015767.1 mouse_genomes_project 1 6961694 6996323 + MGP_BALBcJ_P0018784 Mcmdc2 protein_coding protein_coding MGP_BALBcJ_T0018785.1 MGP_BALBcJ_G0015767.1 mouse_genomes_project 1 6964356 6974296 + MGP_BALBcJ_P0018785 Mcmdc2 protein_coding protein_coding MGP_BALBcJ_T0018786.1 MGP_BALBcJ_G0015767.1 mouse_genomes_project 1 6986110 6995193 + MGP_BALBcJ_P0018786 Mcmdc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000452.1 MGP_BALBcJ_G0000390.1 mouse_genomes_project 1 39862915 39866766 + TEC TEC MGP_BALBcJ_T0011935.1 MGP_BALBcJ_G0010032.1 mouse_genomes_project 1 30284315 30286482 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005879.1 MGP_BALBcJ_G0004932.1 mouse_genomes_project 1 132402001 132406005 + Gm26706 lincRNA lincRNA MGP_BALBcJ_T0002895.1 MGP_BALBcJ_G0002725.1 mouse_genomes_project 1 150874393 150886274 + Gm28610 antisense antisense MGP_BALBcJ_T0012325.1 MGP_BALBcJ_G0010422.1 mouse_genomes_project 1 180625164 180626301 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021494.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96240985 96286830 - MGP_BALBcJ_P0021494 Pam protein_coding protein_coding MGP_BALBcJ_T0021495.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96267202 96546814 - MGP_BALBcJ_P0021495 Pam protein_coding protein_coding MGP_BALBcJ_T0021496.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96267203 96546825 - MGP_BALBcJ_P0021496 Pam protein_coding protein_coding MGP_BALBcJ_T0021497.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96267208 96421944 - MGP_BALBcJ_P0021497 Pam protein_coding protein_coding MGP_BALBcJ_T0021498.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96267835 96286408 - MGP_BALBcJ_P0021498 Pam protein_coding protein_coding MGP_BALBcJ_T0021499.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96268095 96280666 - Pam protein_coding retained_intron MGP_BALBcJ_T0021500.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96268811 96272004 - Pam protein_coding processed_transcript MGP_BALBcJ_T0021501.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96271677 96286900 - Pam protein_coding retained_intron MGP_BALBcJ_T0021502.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96283550 96286410 - Pam protein_coding retained_intron MGP_BALBcJ_T0021503.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96298941 96310481 - Pam protein_coding retained_intron MGP_BALBcJ_T0021504.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96300650 96335042 - MGP_BALBcJ_P0021504 Pam protein_coding protein_coding MGP_BALBcJ_T0021505.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96377603 96421757 - Pam protein_coding retained_intron MGP_BALBcJ_T0021506.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96401807 96421933 - Pam protein_coding processed_transcript MGP_BALBcJ_T0021507.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96500662 96504556 - Pam protein_coding retained_intron MGP_BALBcJ_T0021508.1 MGP_BALBcJ_G0016301.1 mouse_genomes_project 1 96504645 96546839 - Pam protein_coding processed_transcript MGP_BALBcJ_T0023100.1 MGP_BALBcJ_G0016629.1 mouse_genomes_project 1 163931706 163935590 - MGP_BALBcJ_P0023100 Xcl1 protein_coding protein_coding MGP_BALBcJ_T0019755.1 MGP_BALBcJ_G0015959.1 mouse_genomes_project 1 50909473 50955444 - MGP_BALBcJ_P0019755 Gm28551 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012229.1 MGP_BALBcJ_G0010326.1 mouse_genomes_project 1 137833086 137833971 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100397.1 MGP_BALBcJ_G0038433.1 mouse_genomes_project 1 160062080 160062146 + Snord78 snoRNA snoRNA MGP_BALBcJ_T0102054.1 MGP_BALBcJ_G0039871.1 mouse_genomes_project 1 51001988 51004663 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0023897.1 MGP_BALBcJ_G0016823.1 mouse_genomes_project 1 181053271 181055090 - MGP_BALBcJ_P0023897 Ccdc121 protein_coding protein_coding MGP_BALBcJ_T0102055.1 MGP_BALBcJ_G0039872.1 mouse_genomes_project 1 56934521 56943226 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0018914.1 MGP_BALBcJ_G0015790.1 mouse_genomes_project 1 13149313 13150101 - Rpl7 protein_coding processed_transcript MGP_BALBcJ_T0018915.1 MGP_BALBcJ_G0015790.1 mouse_genomes_project 1 13149313 13152671 - MGP_BALBcJ_P0018915 Rpl7 protein_coding protein_coding MGP_BALBcJ_T0018916.1 MGP_BALBcJ_G0015790.1 mouse_genomes_project 1 13149324 13152421 - Rpl7 protein_coding retained_intron MGP_BALBcJ_T0018917.1 MGP_BALBcJ_G0015790.1 mouse_genomes_project 1 13149546 13150867 - Rpl7 protein_coding retained_intron MGP_BALBcJ_T0018918.1 MGP_BALBcJ_G0015790.1 mouse_genomes_project 1 13149798 13152246 - MGP_BALBcJ_P0018918 Rpl7 protein_coding protein_coding MGP_BALBcJ_T0018919.1 MGP_BALBcJ_G0015790.1 mouse_genomes_project 1 13150509 13152403 - Rpl7 protein_coding retained_intron MGP_BALBcJ_T0012129.1 MGP_BALBcJ_G0010226.1 mouse_genomes_project 1 98433878 98434442 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023254.1 MGP_BALBcJ_G0016664.1 mouse_genomes_project 1 168948382 168968089 - MGP_BALBcJ_P0023254 Hsd17b7 protein_coding protein_coding MGP_BALBcJ_T0023255.1 MGP_BALBcJ_G0016664.1 mouse_genomes_project 1 168951723 168964571 - Hsd17b7 protein_coding processed_transcript MGP_BALBcJ_T0023256.1 MGP_BALBcJ_G0016664.1 mouse_genomes_project 1 168954348 168968089 - MGP_BALBcJ_P0023256 Hsd17b7 protein_coding protein_coding MGP_BALBcJ_T0023257.1 MGP_BALBcJ_G0016664.1 mouse_genomes_project 1 168958300 168964997 - Hsd17b7 protein_coding processed_transcript MGP_BALBcJ_T0011980.1 MGP_BALBcJ_G0010077.1 mouse_genomes_project 1 42247928 42248673 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000550.1 MGP_BALBcJ_G0000488.1 mouse_genomes_project 1 86059847 86062840 + TEC TEC MGP_BALBcJ_T0005734.1 MGP_BALBcJ_G0004816.1 mouse_genomes_project 1 61952621 61956894 + Gm13749 lincRNA lincRNA MGP_BALBcJ_T0000781.1 MGP_BALBcJ_G0000715.1 mouse_genomes_project 1 187205761 187206254 - TEC TEC MGP_BALBcJ_T0000588.1 MGP_BALBcJ_G0000526.1 mouse_genomes_project 1 121533468 121535154 + TEC TEC MGP_BALBcJ_T0020116.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61129656 61131022 - Ndufs1 protein_coding retained_intron MGP_BALBcJ_T0020117.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61129656 61163371 - MGP_BALBcJ_P0020117 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0020118.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61129664 61133779 - Ndufs1 protein_coding retained_intron MGP_BALBcJ_T0020119.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61129749 61133447 - MGP_BALBcJ_P0020119 Ndufs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020120.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61129795 61163281 - MGP_BALBcJ_P0020120 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0020121.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61136261 61163212 - MGP_BALBcJ_P0020121 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0020122.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61136428 61139038 - Ndufs1 protein_coding retained_intron MGP_BALBcJ_T0020123.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61142878 61163218 - Ndufs1 protein_coding retained_intron MGP_BALBcJ_T0020124.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61145319 61163216 - Ndufs1 protein_coding retained_intron MGP_BALBcJ_T0020125.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61150248 61163239 - MGP_BALBcJ_P0020125 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0020126.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61151428 61163215 - MGP_BALBcJ_P0020126 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0020127.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61155527 61163342 - MGP_BALBcJ_P0020127 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0020128.1 MGP_BALBcJ_G0016023.1 mouse_genomes_project 1 61156867 61163382 - MGP_BALBcJ_P0020128 Ndufs1 protein_coding protein_coding MGP_BALBcJ_T0012051.1 MGP_BALBcJ_G0010148.1 mouse_genomes_project 1 61347464 61348081 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021509.1 MGP_BALBcJ_G0016302.1 mouse_genomes_project 1 96834826 96939226 + MGP_BALBcJ_P0021509 Slco6d1 protein_coding protein_coding MGP_BALBcJ_T0021510.1 MGP_BALBcJ_G0016302.1 mouse_genomes_project 1 96834829 96947265 + MGP_BALBcJ_P0021510 Slco6d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021511.1 MGP_BALBcJ_G0016302.1 mouse_genomes_project 1 96834856 96939093 + MGP_BALBcJ_P0021511 Slco6d1 protein_coding protein_coding MGP_BALBcJ_T0021512.1 MGP_BALBcJ_G0016302.1 mouse_genomes_project 1 96927529 96939229 + Slco6d1 protein_coding processed_transcript MGP_BALBcJ_T0012031.1 MGP_BALBcJ_G0010128.1 mouse_genomes_project 1 57091740 57093123 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000678.1 MGP_BALBcJ_G0000614.1 mouse_genomes_project 1 152714330 152716246 + TEC TEC MGP_BALBcJ_T0009495.1 MGP_BALBcJ_G0007620.1 mouse_genomes_project 1 91751479 91751607 + Mir6345 miRNA miRNA MGP_BALBcJ_T0012257.1 MGP_BALBcJ_G0010354.1 mouse_genomes_project 1 150078724 150080449 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000565.1 MGP_BALBcJ_G0000503.1 mouse_genomes_project 1 94753993 94756287 + TEC TEC MGP_BALBcJ_T0012218.1 MGP_BALBcJ_G0010315.1 mouse_genomes_project 1 134695178 134695547 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100314.1 MGP_BALBcJ_G0038350.1 mouse_genomes_project 1 4303071 4303201 + Gm23274 snoRNA snoRNA MGP_BALBcJ_T0022650.1 MGP_BALBcJ_G0016545.1 mouse_genomes_project 1 152852615 152908632 - MGP_BALBcJ_P0022650 Teddm2 protein_coding protein_coding MGP_BALBcJ_T0022651.1 MGP_BALBcJ_G0016545.1 mouse_genomes_project 1 152852615 152854269 - MGP_BALBcJ_P0022651 Teddm2 protein_coding protein_coding MGP_BALBcJ_T0022654.1 MGP_BALBcJ_G0016545.1 mouse_genomes_project 1 152905535 152908652 - Teddm2 protein_coding retained_intron MGP_BALBcJ_T0021590.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108438798 108452890 + MGP_BALBcJ_P0021590 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021591.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108439077 108601929 + MGP_BALBcJ_P0021591 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021592.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108439348 108452261 + MGP_BALBcJ_P0021592 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021593.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108439373 108451320 + MGP_BALBcJ_P0021593 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021594.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108439596 108600979 + MGP_BALBcJ_P0021594 Cdh7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021595.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108439648 108455952 + MGP_BALBcJ_P0021595 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021596.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108440104 108600785 + MGP_BALBcJ_P0021596 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021597.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108450919 108600973 + MGP_BALBcJ_P0021597 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0021598.1 MGP_BALBcJ_G0016325.1 mouse_genomes_project 1 108561238 108599842 + MGP_BALBcJ_P0021598 Cdh7 protein_coding protein_coding MGP_BALBcJ_T0023938.1 MGP_BALBcJ_G0016831.1 mouse_genomes_project 1 181964716 182018759 + MGP_BALBcJ_P0023938 Trp53bp2 protein_coding protein_coding MGP_BALBcJ_T0023939.1 MGP_BALBcJ_G0016831.1 mouse_genomes_project 1 181998046 182018109 + Trp53bp2 protein_coding retained_intron MGP_BALBcJ_T0023940.1 MGP_BALBcJ_G0016831.1 mouse_genomes_project 1 182000722 182005223 + MGP_BALBcJ_P0023940 Trp53bp2 protein_coding protein_coding MGP_BALBcJ_T0002864.1 MGP_BALBcJ_G0002702.1 mouse_genomes_project 1 130036347 130037394 + Gm28914 antisense antisense MGP_BALBcJ_T0022216.1 MGP_BALBcJ_G0016460.1 mouse_genomes_project 1 133953516 133963292 + MGP_BALBcJ_P0022216 Arl8a protein_coding protein_coding MGP_BALBcJ_T0022217.1 MGP_BALBcJ_G0016460.1 mouse_genomes_project 1 133954361 133963292 + MGP_BALBcJ_P0022217 Arl8a protein_coding protein_coding MGP_BALBcJ_T0022218.1 MGP_BALBcJ_G0016460.1 mouse_genomes_project 1 133958762 133960991 + Arl8a protein_coding retained_intron MGP_BALBcJ_T0022219.1 MGP_BALBcJ_G0016460.1 mouse_genomes_project 1 133960877 133962351 + Arl8a protein_coding retained_intron MGP_BALBcJ_T0022013.1 MGP_BALBcJ_G0016416.1 mouse_genomes_project 1 131255490 131283989 + MGP_BALBcJ_P0022013 Rbbp5 protein_coding protein_coding MGP_BALBcJ_T0022014.1 MGP_BALBcJ_G0016416.1 mouse_genomes_project 1 131255560 131285158 + MGP_BALBcJ_P0022014 Rbbp5 protein_coding protein_coding MGP_BALBcJ_T0022015.1 MGP_BALBcJ_G0016416.1 mouse_genomes_project 1 131255616 131268609 + MGP_BALBcJ_P0022015 Rbbp5 protein_coding protein_coding MGP_BALBcJ_T0022016.1 MGP_BALBcJ_G0016416.1 mouse_genomes_project 1 131255634 131283285 + MGP_BALBcJ_P0022016 Rbbp5 protein_coding protein_coding MGP_BALBcJ_T0022017.1 MGP_BALBcJ_G0016416.1 mouse_genomes_project 1 131255767 131268693 + MGP_BALBcJ_P0022017 Rbbp5 protein_coding protein_coding MGP_BALBcJ_T0022018.1 MGP_BALBcJ_G0016416.1 mouse_genomes_project 1 131283225 131285154 + Rbbp5 protein_coding retained_intron MGP_BALBcJ_T0022565.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151374439 151390935 - MGP_BALBcJ_P0022565 Tsen15 protein_coding protein_coding MGP_BALBcJ_T0022566.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151374542 151375787 - Tsen15 protein_coding retained_intron MGP_BALBcJ_T0022567.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151374909 151390845 - MGP_BALBcJ_P0022567 Tsen15 protein_coding protein_coding MGP_BALBcJ_T0022568.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151374916 151387701 - Tsen15 protein_coding retained_intron MGP_BALBcJ_T0022569.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151375479 151388048 - Tsen15 protein_coding retained_intron MGP_BALBcJ_T0022570.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151387300 151390941 - Tsen15 protein_coding processed_transcript MGP_BALBcJ_T0022571.1 MGP_BALBcJ_G0016528.1 mouse_genomes_project 1 151388158 151390873 - Tsen15 protein_coding retained_intron MGP_BALBcJ_T0018678.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850319 1891994 + MGP_BALBcJ_P0018678 Lypla1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018679.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850354 1890141 + MGP_BALBcJ_P0018679 Lypla1 protein_coding protein_coding MGP_BALBcJ_T0018680.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850361 1884688 + MGP_BALBcJ_P0018680 Lypla1 protein_coding protein_coding MGP_BALBcJ_T0018682.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850427 1888576 + MGP_BALBcJ_P0018682 Lypla1 protein_coding protein_coding MGP_BALBcJ_T0018683.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850429 1884371 + MGP_BALBcJ_P0018683 Lypla1 protein_coding protein_coding MGP_BALBcJ_T0018684.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850442 1888754 + MGP_BALBcJ_P0018684 Lypla1 protein_coding protein_coding MGP_BALBcJ_T0018685.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1850472 1890142 + MGP_BALBcJ_P0018685 Lypla1 protein_coding protein_coding MGP_BALBcJ_T0018686.1 MGP_BALBcJ_G0015749.1 mouse_genomes_project 1 1880306 1886229 + Lypla1 protein_coding retained_intron MGP_BALBcJ_T0021009.1 MGP_BALBcJ_G0016193.1 mouse_genomes_project 1 85249837 85253442 - MGP_BALBcJ_P0021009 Alpi protein_coding protein_coding MGP_BALBcJ_T0019258.1 MGP_BALBcJ_G0015863.1 mouse_genomes_project 1 33798894 33815203 + MGP_BALBcJ_P0019258 Cnnm3 protein_coding protein_coding MGP_BALBcJ_T0019259.1 MGP_BALBcJ_G0015863.1 mouse_genomes_project 1 33798894 33815203 + MGP_BALBcJ_P0019259 Cnnm3 protein_coding protein_coding MGP_BALBcJ_T0019260.1 MGP_BALBcJ_G0015863.1 mouse_genomes_project 1 33800124 33807401 + Cnnm3 protein_coding retained_intron MGP_BALBcJ_T0019261.1 MGP_BALBcJ_G0015863.1 mouse_genomes_project 1 33805534 33806540 + Cnnm3 protein_coding retained_intron MGP_BALBcJ_T0019262.1 MGP_BALBcJ_G0015863.1 mouse_genomes_project 1 33807726 33812566 + Cnnm3 protein_coding retained_intron MGP_BALBcJ_T0020320.1 MGP_BALBcJ_G0016063.1 mouse_genomes_project 1 69258010 69429801 - MGP_BALBcJ_P0020320 Abca12 protein_coding protein_coding MGP_BALBcJ_T0020321.1 MGP_BALBcJ_G0016063.1 mouse_genomes_project 1 69299332 69316400 - Abca12 protein_coding retained_intron MGP_BALBcJ_T0020322.1 MGP_BALBcJ_G0016063.1 mouse_genomes_project 1 69321679 69429801 - Abca12 protein_coding retained_intron MGP_BALBcJ_T0020323.1 MGP_BALBcJ_G0016063.1 mouse_genomes_project 1 69342100 69345269 - Abca12 protein_coding retained_intron MGP_BALBcJ_T0020324.1 MGP_BALBcJ_G0016063.1 mouse_genomes_project 1 69372464 69429787 - Abca12 protein_coding retained_intron MGP_BALBcJ_T0002577.1 MGP_BALBcJ_G0002478.1 mouse_genomes_project 1 168183202 168183754 + MGP_BALBcJ_P0002577 TR_V_gene TR_V_gene MGP_BALBcJ_T0005634.1 MGP_BALBcJ_G0004744.1 mouse_genomes_project 1 17937399 17940826 + Gm28065 lincRNA lincRNA MGP_BALBcJ_T0100385.1 MGP_BALBcJ_G0038421.1 mouse_genomes_project 1 142652122 142652257 + Gm25663 snoRNA snoRNA MGP_BALBcJ_T0022960.1 MGP_BALBcJ_G0016598.1 mouse_genomes_project 1 160991736 161027708 - MGP_BALBcJ_P0022960 4930558K02Rik protein_coding protein_coding MGP_BALBcJ_T0022961.1 MGP_BALBcJ_G0016598.1 mouse_genomes_project 1 160991741 161017474 - 4930558K02Rik protein_coding processed_transcript MGP_BALBcJ_T0000534.1 MGP_BALBcJ_G0000472.1 mouse_genomes_project 1 82244179 82245823 - TEC TEC MGP_BALBcJ_T0021692.1 MGP_BALBcJ_G0016345.1 mouse_genomes_project 1 118706620 118713317 - MGP_BALBcJ_P0021692 Tmem37 protein_coding protein_coding MGP_BALBcJ_T0005930.1 MGP_BALBcJ_G0004973.1 mouse_genomes_project 1 157950677 157963442 - 1600012P17Rik lincRNA lincRNA MGP_BALBcJ_T0005931.1 MGP_BALBcJ_G0004973.1 mouse_genomes_project 1 157952586 157963047 - 1600012P17Rik lincRNA lincRNA MGP_BALBcJ_T0020906.1 MGP_BALBcJ_G0016169.1 mouse_genomes_project 1 83230128 83233511 + MGP_BALBcJ_P0020906 Gm10553 protein_coding protein_coding MGP_BALBcJ_T0019018.1 MGP_BALBcJ_G0015817.1 mouse_genomes_project 1 18510697 18514693 + MGP_BALBcJ_P0019018 Khdc1b protein_coding protein_coding MGP_BALBcJ_T0012222.1 MGP_BALBcJ_G0010319.1 mouse_genomes_project 1 135662118 135662767 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023126.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164490932 164578543 + MGP_BALBcJ_P0023126 Adcy10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023127.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164490932 164577938 + MGP_BALBcJ_P0023127 Adcy10 protein_coding protein_coding MGP_BALBcJ_T0023128.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164490932 164578913 + MGP_BALBcJ_P0023128 Adcy10 protein_coding protein_coding MGP_BALBcJ_T0023129.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164490938 164577937 + MGP_BALBcJ_P0023129 Adcy10 protein_coding protein_coding MGP_BALBcJ_T0023130.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164490942 164495272 + Adcy10 protein_coding processed_transcript MGP_BALBcJ_T0023131.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164490960 164577935 + MGP_BALBcJ_P0023131 Adcy10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023132.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164509705 164569330 + MGP_BALBcJ_P0023132 Adcy10 protein_coding protein_coding MGP_BALBcJ_T0023133.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164515589 164544333 + Adcy10 protein_coding retained_intron MGP_BALBcJ_T0023134.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164525061 164526873 + Adcy10 protein_coding retained_intron MGP_BALBcJ_T0023135.1 MGP_BALBcJ_G0016636.1 mouse_genomes_project 1 164544156 164552708 + Adcy10 protein_coding processed_transcript MGP_BALBcJ_T0101587.1 MGP_BALBcJ_G0039617.1 mouse_genomes_project 1 156390845 156398976 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101588.1 MGP_BALBcJ_G0039617.1 mouse_genomes_project 1 156391133 156398973 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101589.1 MGP_BALBcJ_G0039617.1 mouse_genomes_project 1 156391471 156391765 + transcribed_processed_pseudogene TEC MGP_BALBcJ_T0101590.1 MGP_BALBcJ_G0039617.1 mouse_genomes_project 1 156398641 156398892 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0100403.1 MGP_BALBcJ_G0038439.1 mouse_genomes_project 1 162070156 162070290 - Gm22671 snoRNA snoRNA MGP_BALBcJ_T0002946.1 MGP_BALBcJ_G0002767.1 mouse_genomes_project 1 178395412 178414678 - Gm16564 antisense antisense MGP_BALBcJ_T0000535.1 MGP_BALBcJ_G0000473.1 mouse_genomes_project 1 82493825 82496722 - TEC TEC MGP_BALBcJ_T0011972.1 MGP_BALBcJ_G0010069.1 mouse_genomes_project 1 41286233 41287049 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012029.1 MGP_BALBcJ_G0010126.1 mouse_genomes_project 1 56487719 56488071 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000802.1 MGP_BALBcJ_G0000735.1 mouse_genomes_project 1 194624261 194626558 + TEC TEC MGP_BALBcJ_T0011951.1 MGP_BALBcJ_G0010048.1 mouse_genomes_project 1 32023723 32024078 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020157.1 MGP_BALBcJ_G0016029.1 mouse_genomes_project 1 61695234 61726723 - MGP_BALBcJ_P0020157 Mdh1b protein_coding protein_coding MGP_BALBcJ_T0018889.1 MGP_BALBcJ_G0015782.1 mouse_genomes_project 1 10697052 10735750 + MGP_BALBcJ_P0018889 Xkr9 protein_coding protein_coding MGP_BALBcJ_T0099125.1 MGP_BALBcJ_G0037161.1 mouse_genomes_project 1 133077388 133077495 - Gm24517 snRNA snRNA MGP_BALBcJ_T0002830.1 MGP_BALBcJ_G0002677.1 mouse_genomes_project 1 86007183 86008136 - Gm19582 antisense antisense MGP_BALBcJ_T0016974.1 MGP_BALBcJ_G0015044.1 mouse_genomes_project 1 88286797 88288426 + D130058E05Rik processed_transcript antisense MGP_BALBcJ_T0016975.1 MGP_BALBcJ_G0015044.1 mouse_genomes_project 1 88286824 88289854 + D130058E05Rik processed_transcript retained_intron MGP_BALBcJ_T0005809.1 MGP_BALBcJ_G0004875.1 mouse_genomes_project 1 89677340 89684908 - Gm26683 lincRNA lincRNA MGP_BALBcJ_T0020111.1 MGP_BALBcJ_G0016022.1 mouse_genomes_project 1 60931303 61067928 - MGP_BALBcJ_P0020111 Ino80d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020112.1 MGP_BALBcJ_G0016022.1 mouse_genomes_project 1 61033545 61090659 - MGP_BALBcJ_P0020112 Ino80d protein_coding protein_coding MGP_BALBcJ_T0020113.1 MGP_BALBcJ_G0016022.1 mouse_genomes_project 1 61035697 61039124 - Ino80d protein_coding retained_intron MGP_BALBcJ_T0020114.1 MGP_BALBcJ_G0016022.1 mouse_genomes_project 1 61037712 61090719 - MGP_BALBcJ_P0020114 Ino80d protein_coding protein_coding MGP_BALBcJ_T0020115.1 MGP_BALBcJ_G0016022.1 mouse_genomes_project 1 61037726 61090640 - MGP_BALBcJ_P0020115 Ino80d protein_coding protein_coding MGP_BALBcJ_T0021464.1 MGP_BALBcJ_G0016292.1 mouse_genomes_project 1 92491270 92496235 + MGP_BALBcJ_P0021464 Neu4 protein_coding protein_coding MGP_BALBcJ_T0021465.1 MGP_BALBcJ_G0016292.1 mouse_genomes_project 1 92491312 92499152 + MGP_BALBcJ_P0021465 Neu4 protein_coding protein_coding MGP_BALBcJ_T0020032.1 MGP_BALBcJ_G0016009.1 mouse_genomes_project 1 57851958 57927636 + MGP_BALBcJ_P0020032 Fam117b protein_coding protein_coding MGP_BALBcJ_T0020033.1 MGP_BALBcJ_G0016009.1 mouse_genomes_project 1 57912842 57923793 + MGP_BALBcJ_P0020033 Fam117b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020034.1 MGP_BALBcJ_G0016009.1 mouse_genomes_project 1 57921457 57923216 + Fam117b protein_coding retained_intron MGP_BALBcJ_T0000664.1 MGP_BALBcJ_G0000600.1 mouse_genomes_project 1 146184524 146185702 - TEC TEC MGP_BALBcJ_T0002882.1 MGP_BALBcJ_G0002716.1 mouse_genomes_project 1 135053398 135062392 + Gm26568 antisense antisense MGP_BALBcJ_T0012232.1 MGP_BALBcJ_G0010329.1 mouse_genomes_project 1 138918292 138926711 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002769.1 MGP_BALBcJ_G0002631.1 mouse_genomes_project 1 36189857 36193512 + Gm37707 antisense antisense MGP_BALBcJ_T0102080.1 MGP_BALBcJ_G0039897.1 mouse_genomes_project 1 105649122 105651130 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0022705.1 MGP_BALBcJ_G0016557.1 mouse_genomes_project 1 154695005 154739377 - MGP_BALBcJ_P0022705 Lhx4 protein_coding protein_coding MGP_BALBcJ_T0022706.1 MGP_BALBcJ_G0016557.1 mouse_genomes_project 1 154701994 154749072 - MGP_BALBcJ_P0022706 Lhx4 protein_coding protein_coding MGP_BALBcJ_T0002879.1 MGP_BALBcJ_G0002713.1 mouse_genomes_project 1 134056535 134074396 + Gm26642 antisense antisense MGP_BALBcJ_T0000587.1 MGP_BALBcJ_G0000525.1 mouse_genomes_project 1 121191700 121192818 + TEC TEC MGP_BALBcJ_T0018671.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1815940 1828447 - MGP_BALBcJ_P0018671 Mrpl15 protein_coding protein_coding MGP_BALBcJ_T0018672.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1815945 1828476 - MGP_BALBcJ_P0018672 Mrpl15 protein_coding protein_coding MGP_BALBcJ_T0018673.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1817170 1828435 - MGP_BALBcJ_P0018673 Mrpl15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018674.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1819111 1828476 - Mrpl15 protein_coding processed_transcript MGP_BALBcJ_T0018675.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1822690 1827290 - Mrpl15 protein_coding retained_intron MGP_BALBcJ_T0018676.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1823944 1828476 - MGP_BALBcJ_P0018676 Mrpl15 protein_coding protein_coding MGP_BALBcJ_T0018677.1 MGP_BALBcJ_G0015748.1 mouse_genomes_project 1 1826295 1828429 - Mrpl15 protein_coding retained_intron MGP_BALBcJ_T0102088.1 MGP_BALBcJ_G0039905.1 mouse_genomes_project 1 138825742 138875925 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0021026.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366213 85392800 + MGP_BALBcJ_P0021026 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021027.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366213 85378907 + MGP_BALBcJ_P0021027 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021028.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366213 85392800 + MGP_BALBcJ_P0021028 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021029.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366213 85381156 + MGP_BALBcJ_P0021029 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021030.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366213 85387011 + MGP_BALBcJ_P0021030 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021031.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366238 85378900 + MGP_BALBcJ_P0021031 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021032.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366278 85378173 + MGP_BALBcJ_P0021032 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0021033.1 MGP_BALBcJ_G0016199.1 mouse_genomes_project 1 85366585 85380364 + MGP_BALBcJ_P0021033 Eif4e2 protein_coding protein_coding MGP_BALBcJ_T0098707.1 MGP_BALBcJ_G0036761.1 mouse_genomes_project 1 43079770 43079973 + Gm23984 ribozyme ribozyme MGP_BALBcJ_T0002750.1 MGP_BALBcJ_G0002616.1 mouse_genomes_project 1 18359439 18380372 - Gm28836 antisense antisense MGP_BALBcJ_T0011999.1 MGP_BALBcJ_G0010096.1 mouse_genomes_project 1 46407425 46408435 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012208.1 MGP_BALBcJ_G0010305.1 mouse_genomes_project 1 127475721 127476143 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011906.1 MGP_BALBcJ_G0010003.1 mouse_genomes_project 1 19867541 19868343 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000415.1 MGP_BALBcJ_G0000354.1 mouse_genomes_project 1 22976761 22977757 - TEC TEC MGP_BALBcJ_T0020823.1 MGP_BALBcJ_G0016155.1 mouse_genomes_project 1 80604133 80660532 + protein_coding retained_intron MGP_BALBcJ_T0020824.1 MGP_BALBcJ_G0016155.1 mouse_genomes_project 1 80604188 80818419 + MGP_BALBcJ_P0020824 protein_coding protein_coding MGP_BALBcJ_T0020825.1 MGP_BALBcJ_G0016155.1 mouse_genomes_project 1 80732173 80815401 + MGP_BALBcJ_P0020825 protein_coding protein_coding MGP_BALBcJ_T0020826.1 MGP_BALBcJ_G0016155.1 mouse_genomes_project 1 80732173 80815303 + MGP_BALBcJ_P0020826 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000470.1 MGP_BALBcJ_G0000408.1 mouse_genomes_project 1 53821366 53821719 - TEC TEC MGP_BALBcJ_T0005868.1 MGP_BALBcJ_G0004922.1 mouse_genomes_project 1 123908320 123914772 - 1700121L03Rik lincRNA lincRNA MGP_BALBcJ_T0021907.1 MGP_BALBcJ_G0016394.1 mouse_genomes_project 1 129952541 130021661 - MGP_BALBcJ_P0021907 Rassf5 protein_coding protein_coding MGP_BALBcJ_T0021908.1 MGP_BALBcJ_G0016394.1 mouse_genomes_project 1 129953904 129977286 - MGP_BALBcJ_P0021908 Rassf5 protein_coding protein_coding MGP_BALBcJ_T0021909.1 MGP_BALBcJ_G0016394.1 mouse_genomes_project 1 129984799 130021767 - Rassf5 protein_coding processed_transcript MGP_BALBcJ_T0098796.1 MGP_BALBcJ_G0036849.1 mouse_genomes_project 1 104025183 104025636 - Gm28404 sense_intronic sense_intronic MGP_BALBcJ_T0000736.1 MGP_BALBcJ_G0000672.1 mouse_genomes_project 1 174692184 174693994 - TEC TEC MGP_BALBcJ_T0012349.1 MGP_BALBcJ_G0010446.1 mouse_genomes_project 1 192604587 192604702 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099151.1 MGP_BALBcJ_G0037187.1 mouse_genomes_project 1 175207719 175207825 + Gm23805 snRNA snRNA MGP_BALBcJ_T0102096.1 MGP_BALBcJ_G0039913.1 mouse_genomes_project 1 172930029 172932897 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002738.1 MGP_BALBcJ_G0002608.1 mouse_genomes_project 1 13299706 13313845 + Gm7568 antisense antisense MGP_BALBcJ_T0002739.1 MGP_BALBcJ_G0002608.1 mouse_genomes_project 1 13299706 13304866 + Gm7568 antisense antisense MGP_BALBcJ_T0002740.1 MGP_BALBcJ_G0002608.1 mouse_genomes_project 1 13299743 13304862 + Gm7568 antisense antisense MGP_BALBcJ_T0009511.1 MGP_BALBcJ_G0007636.1 mouse_genomes_project 1 136812752 136812839 + Mir181a-1 miRNA miRNA MGP_BALBcJ_T0000683.1 MGP_BALBcJ_G0000619.1 mouse_genomes_project 1 155029185 155032979 - TEC TEC MGP_BALBcJ_T0000676.1 MGP_BALBcJ_G0000612.1 mouse_genomes_project 1 152285699 152289040 - TEC TEC MGP_BALBcJ_T0005986.1 MGP_BALBcJ_G0005018.1 mouse_genomes_project 1 181360337 181369046 + lincRNA lincRNA MGP_BALBcJ_T0005987.1 MGP_BALBcJ_G0005018.1 mouse_genomes_project 1 181363355 181369024 + lincRNA lincRNA MGP_BALBcJ_T0005988.1 MGP_BALBcJ_G0005018.1 mouse_genomes_project 1 181367762 181370079 + lincRNA lincRNA MGP_BALBcJ_T0021062.1 MGP_BALBcJ_G0016203.1 mouse_genomes_project 1 85619283 85624495 + MGP_BALBcJ_P0021062 3110079O15Rik protein_coding protein_coding MGP_BALBcJ_T0021063.1 MGP_BALBcJ_G0016203.1 mouse_genomes_project 1 85621551 85624471 + 3110079O15Rik protein_coding processed_transcript MGP_BALBcJ_T0005994.1 MGP_BALBcJ_G0005023.1 mouse_genomes_project 1 182945302 182945685 + Gm37986 lincRNA lincRNA MGP_BALBcJ_T0022349.1 MGP_BALBcJ_G0016486.1 mouse_genomes_project 1 135479093 135484246 + MGP_BALBcJ_P0022349 Zfp281 protein_coding protein_coding MGP_BALBcJ_T0022350.1 MGP_BALBcJ_G0016486.1 mouse_genomes_project 1 135479093 135484246 + MGP_BALBcJ_P0022350 Zfp281 protein_coding protein_coding MGP_BALBcJ_T0000376.1 MGP_BALBcJ_G0000317.1 mouse_genomes_project 1 10375845 10380418 - TEC TEC MGP_BALBcJ_T0021962.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130769917 130789130 + MGP_BALBcJ_P0021962 Elk4 protein_coding protein_coding MGP_BALBcJ_T0021963.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130770183 130786343 + MGP_BALBcJ_P0021963 Elk4 protein_coding protein_coding MGP_BALBcJ_T0021964.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130770406 130776823 + Elk4 protein_coding processed_transcript MGP_BALBcJ_T0021965.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130770416 130776681 + Elk4 protein_coding processed_transcript MGP_BALBcJ_T0021966.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130770604 130780952 + MGP_BALBcJ_P0021966 Elk4 protein_coding protein_coding MGP_BALBcJ_T0021967.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130780454 130795050 + MGP_BALBcJ_P0021967 Elk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021968.1 MGP_BALBcJ_G0016407.1 mouse_genomes_project 1 130781089 130794132 + Elk4 protein_coding processed_transcript MGP_BALBcJ_T0011897.1 MGP_BALBcJ_G0009994.1 mouse_genomes_project 1 17921534 17922720 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012249.1 MGP_BALBcJ_G0010346.1 mouse_genomes_project 1 147885883 147886108 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011217.1 MGP_BALBcJ_G0009342.1 mouse_genomes_project 1 12935276 12935579 + Gm23259 misc_RNA misc_RNA MGP_BALBcJ_T0020843.1 MGP_BALBcJ_G0016157.1 mouse_genomes_project 1 80854117 80865931 - MGP_BALBcJ_P0020843 Tm4sf20 protein_coding protein_coding MGP_BALBcJ_T0020844.1 MGP_BALBcJ_G0016157.1 mouse_genomes_project 1 80854870 80865931 - Tm4sf20 protein_coding processed_transcript MGP_BALBcJ_T0020143.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61438886 61569368 + MGP_BALBcJ_P0020143 Adam23 protein_coding protein_coding MGP_BALBcJ_T0020144.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61438890 61592362 + MGP_BALBcJ_P0020144 Adam23 protein_coding protein_coding MGP_BALBcJ_T0020145.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61438905 61564912 + Adam23 protein_coding retained_intron MGP_BALBcJ_T0020146.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61438930 61528226 + Adam23 protein_coding retained_intron MGP_BALBcJ_T0020147.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61439206 61588997 + MGP_BALBcJ_P0020147 Adam23 protein_coding protein_coding MGP_BALBcJ_T0020148.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61439206 61592362 + MGP_BALBcJ_P0020148 Adam23 protein_coding protein_coding MGP_BALBcJ_T0020149.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61464076 61540916 + Adam23 protein_coding processed_transcript MGP_BALBcJ_T0020150.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61488004 61592362 + Adam23 protein_coding processed_transcript MGP_BALBcJ_T0020151.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61532343 61535850 + Adam23 protein_coding retained_intron MGP_BALBcJ_T0020152.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61550742 61562728 + Adam23 protein_coding retained_intron MGP_BALBcJ_T0020153.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61574876 61578264 + Adam23 protein_coding retained_intron MGP_BALBcJ_T0020154.1 MGP_BALBcJ_G0016027.1 mouse_genomes_project 1 61581107 61588890 + Adam23 protein_coding retained_intron MGP_BALBcJ_T0020811.1 MGP_BALBcJ_G0016150.1 mouse_genomes_project 1 79102431 79338019 + MGP_BALBcJ_P0020811 Nyap2 protein_coding protein_coding MGP_BALBcJ_T0020812.1 MGP_BALBcJ_G0016150.1 mouse_genomes_project 1 79102686 79337994 + MGP_BALBcJ_P0020812 Nyap2 protein_coding protein_coding MGP_BALBcJ_T0020813.1 MGP_BALBcJ_G0016150.1 mouse_genomes_project 1 79102788 79308291 + MGP_BALBcJ_P0020813 Nyap2 protein_coding protein_coding MGP_BALBcJ_T0020814.1 MGP_BALBcJ_G0016150.1 mouse_genomes_project 1 79102795 79339181 + MGP_BALBcJ_P0020814 Nyap2 protein_coding protein_coding MGP_BALBcJ_T0020815.1 MGP_BALBcJ_G0016150.1 mouse_genomes_project 1 79103054 79383814 + MGP_BALBcJ_P0020815 Nyap2 protein_coding protein_coding MGP_BALBcJ_T0098735.1 MGP_BALBcJ_G0036789.1 mouse_genomes_project 1 158366368 158366508 + Scarna3a scaRNA scaRNA MGP_BALBcJ_T0023328.1 MGP_BALBcJ_G0016684.1 mouse_genomes_project 1 170213959 170224639 + MGP_BALBcJ_P0023328 Mpz protein_coding protein_coding MGP_BALBcJ_T0023329.1 MGP_BALBcJ_G0016684.1 mouse_genomes_project 1 170218735 170223728 + MGP_BALBcJ_P0023329 Mpz protein_coding protein_coding MGP_BALBcJ_T0023330.1 MGP_BALBcJ_G0016684.1 mouse_genomes_project 1 170222814 170223451 + Mpz protein_coding processed_transcript MGP_BALBcJ_T0023331.1 MGP_BALBcJ_G0016684.1 mouse_genomes_project 1 170222923 170223466 + Mpz protein_coding processed_transcript MGP_BALBcJ_T0005728.1 MGP_BALBcJ_G0004813.1 mouse_genomes_project 1 61089663 61091385 + Ino80dos lincRNA lincRNA MGP_BALBcJ_T0005729.1 MGP_BALBcJ_G0004813.1 mouse_genomes_project 1 61090533 61091756 + Ino80dos lincRNA lincRNA MGP_BALBcJ_T0005730.1 MGP_BALBcJ_G0004813.1 mouse_genomes_project 1 61091164 61143441 + Ino80dos lincRNA lincRNA MGP_BALBcJ_T0020596.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194522 73199291 + MGP_BALBcJ_P0020596 Stk16 protein_coding protein_coding MGP_BALBcJ_T0020597.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194530 73195556 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020598.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194532 73195920 + MGP_BALBcJ_P0020598 Stk16 protein_coding protein_coding MGP_BALBcJ_T0020599.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194554 73197927 + MGP_BALBcJ_P0020599 Stk16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020600.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194558 73195919 + MGP_BALBcJ_P0020600 Stk16 protein_coding protein_coding MGP_BALBcJ_T0020601.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194560 73197924 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020602.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194564 73196822 + Stk16 protein_coding processed_transcript MGP_BALBcJ_T0020603.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194738 73196913 + MGP_BALBcJ_P0020603 Stk16 protein_coding protein_coding MGP_BALBcJ_T0020604.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73194924 73197636 + MGP_BALBcJ_P0020604 Stk16 protein_coding protein_coding MGP_BALBcJ_T0020605.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73195646 73196872 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020606.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73195687 73196778 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020607.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73195689 73196090 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020608.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73196083 73196840 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020609.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73196308 73197701 + Stk16 protein_coding processed_transcript MGP_BALBcJ_T0020610.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73196316 73197598 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0020611.1 MGP_BALBcJ_G0016116.1 mouse_genomes_project 1 73196745 73197716 + Stk16 protein_coding retained_intron MGP_BALBcJ_T0016947.1 MGP_BALBcJ_G0015032.1 mouse_genomes_project 1 41477200 41495679 - Gm29247 processed_transcript processed_transcript MGP_BALBcJ_T0016948.1 MGP_BALBcJ_G0015032.1 mouse_genomes_project 1 41477301 41496424 - Gm29247 processed_transcript processed_transcript MGP_BALBcJ_T0012217.1 MGP_BALBcJ_G0010314.1 mouse_genomes_project 1 132907077 132908020 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011942.1 MGP_BALBcJ_G0010039.1 mouse_genomes_project 1 31204952 31205286 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100351.1 MGP_BALBcJ_G0038387.1 mouse_genomes_project 1 61165552 61165684 + Snora41 snoRNA snoRNA MGP_BALBcJ_T0002907.1 MGP_BALBcJ_G0002737.1 mouse_genomes_project 1 160065477 160066268 + Gm37634 antisense antisense MGP_BALBcJ_T0022722.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155007229 155037758 - MGP_BALBcJ_P0022722 Tor1aip1 protein_coding protein_coding MGP_BALBcJ_T0022723.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155007244 155039362 - MGP_BALBcJ_P0022723 Tor1aip1 protein_coding protein_coding MGP_BALBcJ_T0022724.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155008863 155039415 - MGP_BALBcJ_P0022724 Tor1aip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022725.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155009409 155039415 - MGP_BALBcJ_P0022725 Tor1aip1 protein_coding protein_coding MGP_BALBcJ_T0022726.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155010159 155035893 - MGP_BALBcJ_P0022726 Tor1aip1 protein_coding protein_coding MGP_BALBcJ_T0022727.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155010200 155037821 - MGP_BALBcJ_P0022727 Tor1aip1 protein_coding protein_coding MGP_BALBcJ_T0022728.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155010200 155039415 - MGP_BALBcJ_P0022728 Tor1aip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022729.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155020008 155021333 - Tor1aip1 protein_coding retained_intron MGP_BALBcJ_T0022730.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155020574 155039170 - MGP_BALBcJ_P0022730 Tor1aip1 protein_coding unknown_likely_coding MGP_BALBcJ_T0022731.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155025317 155038985 - MGP_BALBcJ_P0022731 Tor1aip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022732.1 MGP_BALBcJ_G0016560.1 mouse_genomes_project 1 155033144 155039082 - Tor1aip1 protein_coding retained_intron MGP_BALBcJ_T0022399.1 MGP_BALBcJ_G0016495.1 mouse_genomes_project 1 138269692 138289257 + MGP_BALBcJ_P0022399 Zbtb41 protein_coding protein_coding MGP_BALBcJ_T0022400.1 MGP_BALBcJ_G0016495.1 mouse_genomes_project 1 138269786 138300405 + MGP_BALBcJ_P0022400 Zbtb41 protein_coding protein_coding MGP_BALBcJ_T0022401.1 MGP_BALBcJ_G0016495.1 mouse_genomes_project 1 138271058 138296583 + MGP_BALBcJ_P0022401 Zbtb41 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102081.1 MGP_BALBcJ_G0039898.1 mouse_genomes_project 1 105813092 105827141 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0020195.1 MGP_BALBcJ_G0016038.1 mouse_genomes_project 1 62999707 63024678 - MGP_BALBcJ_P0020195 Akr1cl protein_coding protein_coding MGP_BALBcJ_T0020196.1 MGP_BALBcJ_G0016038.1 mouse_genomes_project 1 62999707 63024690 - MGP_BALBcJ_P0020196 Akr1cl protein_coding protein_coding MGP_BALBcJ_T0020197.1 MGP_BALBcJ_G0016038.1 mouse_genomes_project 1 63001488 63003562 - Akr1cl protein_coding retained_intron MGP_BALBcJ_T0020198.1 MGP_BALBcJ_G0016038.1 mouse_genomes_project 1 63003086 63024617 - MGP_BALBcJ_P0020198 Akr1cl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020199.1 MGP_BALBcJ_G0016038.1 mouse_genomes_project 1 63019615 63024663 - Akr1cl protein_coding processed_transcript MGP_BALBcJ_T0020200.1 MGP_BALBcJ_G0016038.1 mouse_genomes_project 1 63021457 63024679 - Akr1cl protein_coding retained_intron MGP_BALBcJ_T0000462.1 MGP_BALBcJ_G0000400.1 mouse_genomes_project 1 50244910 50246782 - TEC TEC MGP_BALBcJ_T0102056.1 MGP_BALBcJ_G0039873.1 mouse_genomes_project 1 63417741 63418013 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000502.1 MGP_BALBcJ_G0000440.1 mouse_genomes_project 1 66612265 66613631 - TEC TEC MGP_BALBcJ_T0011243.1 MGP_BALBcJ_G0009368.1 mouse_genomes_project 1 194822413 194822511 - Gm27940 misc_RNA misc_RNA MGP_BALBcJ_T0011840.1 MGP_BALBcJ_G0009937.1 mouse_genomes_project 1 2649089 2649483 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022443.1 MGP_BALBcJ_G0016506.1 mouse_genomes_project 1 142623291 142650263 - MGP_BALBcJ_P0022443 Trove2 protein_coding protein_coding MGP_BALBcJ_T0022444.1 MGP_BALBcJ_G0016506.1 mouse_genomes_project 1 142629226 142650117 - Trove2 protein_coding retained_intron MGP_BALBcJ_T0012345.1 MGP_BALBcJ_G0010442.1 mouse_genomes_project 1 191381825 191382157 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012055.1 MGP_BALBcJ_G0010152.1 mouse_genomes_project 1 62442651 62442870 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019036.1 MGP_BALBcJ_G0015820.1 mouse_genomes_project 1 20235410 20237191 - MGP_BALBcJ_P0019036 4933415F23Rik protein_coding protein_coding MGP_BALBcJ_T0102068.1 MGP_BALBcJ_G0039885.1 mouse_genomes_project 1 86427240 86428023 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006014.1 MGP_BALBcJ_G0005037.1 mouse_genomes_project 1 185255940 185271819 + Gm38093 lincRNA lincRNA MGP_BALBcJ_T0018939.1 MGP_BALBcJ_G0015793.1 mouse_genomes_project 1 13605683 13684426 - MGP_BALBcJ_P0018939 Ube2w protein_coding protein_coding MGP_BALBcJ_T0018940.1 MGP_BALBcJ_G0015793.1 mouse_genomes_project 1 13630113 13651726 - Ube2w protein_coding processed_transcript MGP_BALBcJ_T0018941.1 MGP_BALBcJ_G0015793.1 mouse_genomes_project 1 13635653 13684603 - MGP_BALBcJ_P0018941 Ube2w protein_coding protein_coding MGP_BALBcJ_T0018942.1 MGP_BALBcJ_G0015793.1 mouse_genomes_project 1 13648263 13684373 - MGP_BALBcJ_P0018942 Ube2w protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018943.1 MGP_BALBcJ_G0015793.1 mouse_genomes_project 1 13650485 13684398 - Ube2w protein_coding retained_intron MGP_BALBcJ_T0018944.1 MGP_BALBcJ_G0015793.1 mouse_genomes_project 1 13667387 13684398 - Ube2w protein_coding retained_intron MGP_BALBcJ_T0000458.1 MGP_BALBcJ_G0000396.1 mouse_genomes_project 1 44465538 44469408 - TEC TEC MGP_BALBcJ_T0012176.1 MGP_BALBcJ_G0010273.1 mouse_genomes_project 1 116089496 116089970 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020067.1 MGP_BALBcJ_G0016014.1 mouse_genomes_project 1 58299110 58329008 + Cyp20a1 protein_coding retained_intron MGP_BALBcJ_T0020068.1 MGP_BALBcJ_G0016014.1 mouse_genomes_project 1 58299110 58344346 + MGP_BALBcJ_P0020068 Cyp20a1 protein_coding protein_coding MGP_BALBcJ_T0020069.1 MGP_BALBcJ_G0016014.1 mouse_genomes_project 1 58299110 58344346 + MGP_BALBcJ_P0020069 Cyp20a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020104.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672065 60712915 + Nrp2 protein_coding retained_intron MGP_BALBcJ_T0020105.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672065 60792578 + MGP_BALBcJ_P0020105 Nrp2 protein_coding protein_coding MGP_BALBcJ_T0020106.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672065 60792578 + MGP_BALBcJ_P0020106 Nrp2 protein_coding protein_coding MGP_BALBcJ_T0020107.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672482 60773068 + MGP_BALBcJ_P0020107 Nrp2 protein_coding protein_coding MGP_BALBcJ_T0020108.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672482 60770770 + MGP_BALBcJ_P0020108 Nrp2 protein_coding protein_coding MGP_BALBcJ_T0020109.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672482 60792578 + MGP_BALBcJ_P0020109 Nrp2 protein_coding protein_coding MGP_BALBcJ_T0020110.1 MGP_BALBcJ_G0016021.1 mouse_genomes_project 1 60672482 60792578 + MGP_BALBcJ_P0020110 Nrp2 protein_coding protein_coding MGP_BALBcJ_T0022904.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160029953 160059963 - MGP_BALBcJ_P0022904 Zbtb37 protein_coding protein_coding MGP_BALBcJ_T0022905.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160035992 160059963 - MGP_BALBcJ_P0022905 Zbtb37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022906.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160035998 160059948 - MGP_BALBcJ_P0022906 Zbtb37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022907.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160043173 160059372 - MGP_BALBcJ_P0022907 Zbtb37 protein_coding protein_coding MGP_BALBcJ_T0022908.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160044678 160059962 - MGP_BALBcJ_P0022908 Zbtb37 protein_coding protein_coding MGP_BALBcJ_T0022909.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160044842 160059397 - MGP_BALBcJ_P0022909 Zbtb37 protein_coding protein_coding MGP_BALBcJ_T0022910.1 MGP_BALBcJ_G0016588.1 mouse_genomes_project 1 160057563 160059930 - MGP_BALBcJ_P0022910 Zbtb37 protein_coding protein_coding MGP_BALBcJ_T0005709.1 MGP_BALBcJ_G0004797.1 mouse_genomes_project 1 53881059 53882279 + 1700003I22Rik lincRNA lincRNA MGP_BALBcJ_T0005710.1 MGP_BALBcJ_G0004797.1 mouse_genomes_project 1 53881104 53882213 + 1700003I22Rik lincRNA lincRNA MGP_BALBcJ_T0021888.1 MGP_BALBcJ_G0016388.1 mouse_genomes_project 1 129673755 129677622 - MGP_BALBcJ_P0021888 Il20 protein_coding protein_coding MGP_BALBcJ_T0021889.1 MGP_BALBcJ_G0016388.1 mouse_genomes_project 1 129674185 129677397 - MGP_BALBcJ_P0021889 Il20 protein_coding protein_coding MGP_BALBcJ_T0000384.1 MGP_BALBcJ_G0000325.1 mouse_genomes_project 1 12911684 12914853 + TEC TEC MGP_BALBcJ_T0002984.1 MGP_BALBcJ_G0002795.1 mouse_genomes_project 1 192384009 192385333 + Gm15867 antisense antisense MGP_BALBcJ_T0005895.1 MGP_BALBcJ_G0004945.1 mouse_genomes_project 1 135553296 135583744 + Platr22 lincRNA lincRNA MGP_BALBcJ_T0022967.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161030499 161329069 - MGP_BALBcJ_P0022967 Dnm3 protein_coding protein_coding MGP_BALBcJ_T0022968.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161030504 161033730 - Dnm3 protein_coding retained_intron MGP_BALBcJ_T0022969.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161035816 161510901 - MGP_BALBcJ_P0022969 Dnm3 protein_coding protein_coding MGP_BALBcJ_T0022970.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161038725 161510901 - MGP_BALBcJ_P0022970 Dnm3 protein_coding protein_coding MGP_BALBcJ_T0022971.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161040039 161044573 - Dnm3 protein_coding retained_intron MGP_BALBcJ_T0022972.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161054979 161329013 - MGP_BALBcJ_P0022972 Dnm3 protein_coding protein_coding MGP_BALBcJ_T0022973.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161068231 161171776 - Dnm3 protein_coding retained_intron MGP_BALBcJ_T0022974.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161305988 161329028 - Dnm3 protein_coding processed_transcript MGP_BALBcJ_T0022975.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161315997 161347471 - Dnm3 protein_coding processed_transcript MGP_BALBcJ_T0022976.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161351915 161510879 - Dnm3 protein_coding retained_intron MGP_BALBcJ_T0022977.1 MGP_BALBcJ_G0016600.1 mouse_genomes_project 1 161439221 161441692 - Dnm3 protein_coding retained_intron MGP_BALBcJ_T0100322.1 MGP_BALBcJ_G0038358.1 mouse_genomes_project 1 14568029 14568140 + Gm25166 snoRNA snoRNA MGP_BALBcJ_T0099112.1 MGP_BALBcJ_G0037148.1 mouse_genomes_project 1 97428781 97428881 + Gm23434 snRNA snRNA MGP_BALBcJ_T0023621.1 MGP_BALBcJ_G0016761.1 mouse_genomes_project 1 173382430 173383354 - MGP_BALBcJ_P0023621 Olfr231 protein_coding protein_coding MGP_BALBcJ_T0005850.1 MGP_BALBcJ_G0004909.1 mouse_genomes_project 1 118164836 118171519 - 3830432H09Rik lincRNA lincRNA MGP_BALBcJ_T0005851.1 MGP_BALBcJ_G0004909.1 mouse_genomes_project 1 118165649 118170599 - 3830432H09Rik lincRNA lincRNA MGP_BALBcJ_T0023421.1 MGP_BALBcJ_G0016699.1 mouse_genomes_project 1 170429117 170431461 - MGP_BALBcJ_P0023421 Klhdc9 protein_coding protein_coding MGP_BALBcJ_T0023660.1 MGP_BALBcJ_G0016776.1 mouse_genomes_project 1 174993313 174999421 - MGP_BALBcJ_P0023660 Chml protein_coding protein_coding MGP_BALBcJ_T0000549.1 MGP_BALBcJ_G0000487.1 mouse_genomes_project 1 86019733 86020557 + TEC TEC MGP_BALBcJ_T0022661.1 MGP_BALBcJ_G0016550.1 mouse_genomes_project 1 153395265 153726861 - MGP_BALBcJ_P0022661 Cacna1e protein_coding protein_coding MGP_BALBcJ_T0022662.1 MGP_BALBcJ_G0016550.1 mouse_genomes_project 1 153397053 153726425 - MGP_BALBcJ_P0022662 Cacna1e protein_coding protein_coding MGP_BALBcJ_T0022663.1 MGP_BALBcJ_G0016550.1 mouse_genomes_project 1 153471703 153479310 - Cacna1e protein_coding retained_intron MGP_BALBcJ_T0022664.1 MGP_BALBcJ_G0016550.1 mouse_genomes_project 1 153483688 153817661 - Cacna1e protein_coding retained_intron MGP_BALBcJ_T0022665.1 MGP_BALBcJ_G0016550.1 mouse_genomes_project 1 153699665 153885327 - Cacna1e protein_coding retained_intron MGP_BALBcJ_T0022666.1 MGP_BALBcJ_G0016550.1 mouse_genomes_project 1 153882991 153884850 - Cacna1e protein_coding retained_intron MGP_BALBcJ_T0005753.1 MGP_BALBcJ_G0004831.1 mouse_genomes_project 1 70262676 70293116 + D230017M19Rik lincRNA lincRNA MGP_BALBcJ_T0005754.1 MGP_BALBcJ_G0004831.1 mouse_genomes_project 1 70270223 70302228 + D230017M19Rik lincRNA lincRNA MGP_BALBcJ_T0005755.1 MGP_BALBcJ_G0004831.1 mouse_genomes_project 1 70291672 70294158 + D230017M19Rik lincRNA lincRNA MGP_BALBcJ_T0012278.1 MGP_BALBcJ_G0010375.1 mouse_genomes_project 1 158404686 158405193 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100381.1 MGP_BALBcJ_G0038417.1 mouse_genomes_project 1 133302882 133303008 + Gm25612 snoRNA snoRNA MGP_BALBcJ_T0009500.1 MGP_BALBcJ_G0007625.1 mouse_genomes_project 1 104029111 104029193 + Gm22426 miRNA miRNA MGP_BALBcJ_T0000427.1 MGP_BALBcJ_G0000366.1 mouse_genomes_project 1 30908887 30909776 + TEC TEC MGP_BALBcJ_T0000428.1 MGP_BALBcJ_G0000366.1 mouse_genomes_project 1 30908906 30909776 + TEC TEC MGP_BALBcJ_T0021710.1 MGP_BALBcJ_G0016350.1 mouse_genomes_project 1 119125566 119156733 - MGP_BALBcJ_P0021710 Marco protein_coding protein_coding MGP_BALBcJ_T0021711.1 MGP_BALBcJ_G0016350.1 mouse_genomes_project 1 119142618 119156465 - MGP_BALBcJ_P0021711 Marco protein_coding protein_coding MGP_BALBcJ_T0022733.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155038337 155072222 + MGP_BALBcJ_P0022733 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022734.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155038660 155056548 + MGP_BALBcJ_P0022734 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022735.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155038706 155062533 + MGP_BALBcJ_P0022735 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022736.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155039067 155056755 + MGP_BALBcJ_P0022736 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022737.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155043786 155054688 + Tor1aip2 protein_coding processed_transcript MGP_BALBcJ_T0022738.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155043786 155072222 + MGP_BALBcJ_P0022738 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022739.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155043813 155056755 + MGP_BALBcJ_P0022739 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022740.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155043813 155056755 + MGP_BALBcJ_P0022740 Tor1aip2 protein_coding protein_coding MGP_BALBcJ_T0022741.1 MGP_BALBcJ_G0016561.1 mouse_genomes_project 1 155066308 155068214 + Tor1aip2 protein_coding retained_intron MGP_BALBcJ_T0020395.1 MGP_BALBcJ_G0016078.1 mouse_genomes_project 1 72163014 72183013 + MGP_BALBcJ_P0020395 Rufy4 protein_coding protein_coding MGP_BALBcJ_T0005632.1 MGP_BALBcJ_G0004742.1 mouse_genomes_project 1 16320266 16321307 + Gm28340 lincRNA lincRNA MGP_BALBcJ_T0102045.1 MGP_BALBcJ_G0039862.1 mouse_genomes_project 1 15050357 15066951 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005917.1 MGP_BALBcJ_G0004964.1 mouse_genomes_project 1 153013691 153016513 - Gm29291 lincRNA lincRNA MGP_BALBcJ_T0005918.1 MGP_BALBcJ_G0004964.1 mouse_genomes_project 1 153013847 153016517 - Gm29291 lincRNA lincRNA MGP_BALBcJ_T0000794.1 MGP_BALBcJ_G0000727.1 mouse_genomes_project 1 192914641 192915269 + TEC TEC MGP_BALBcJ_T0011969.1 MGP_BALBcJ_G0010066.1 mouse_genomes_project 1 40790706 40791867 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000508.1 MGP_BALBcJ_G0000446.1 mouse_genomes_project 1 69865993 69869514 - TEC TEC MGP_BALBcJ_T0022667.1 MGP_BALBcJ_G0016551.1 mouse_genomes_project 1 154088789 154092065 - MGP_BALBcJ_P0022667 Ier5 protein_coding protein_coding MGP_BALBcJ_T0019558.1 MGP_BALBcJ_G0015923.1 mouse_genomes_project 1 41441818 41447803 - MGP_BALBcJ_P0019558 Gm8251 protein_coding protein_coding MGP_BALBcJ_T0023606.1 MGP_BALBcJ_G0016751.1 mouse_genomes_project 1 172941466 172960246 - MGP_BALBcJ_P0023606 AI607873 protein_coding protein_coding MGP_BALBcJ_T0023607.1 MGP_BALBcJ_G0016751.1 mouse_genomes_project 1 172941719 172960182 - MGP_BALBcJ_P0023607 AI607873 protein_coding protein_coding MGP_BALBcJ_T0100361.1 MGP_BALBcJ_G0038397.1 mouse_genomes_project 1 93047293 93047362 - Gm23389 snoRNA snoRNA MGP_BALBcJ_T0017006.1 MGP_BALBcJ_G0015054.1 mouse_genomes_project 1 149013423 149038520 - Ptgs2os processed_transcript antisense MGP_BALBcJ_T0017007.1 MGP_BALBcJ_G0015054.1 mouse_genomes_project 1 149036883 149038666 - Ptgs2os processed_transcript retained_intron MGP_BALBcJ_T0012157.1 MGP_BALBcJ_G0010254.1 mouse_genomes_project 1 107485098 107486225 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012057.1 MGP_BALBcJ_G0010154.1 mouse_genomes_project 1 63020010 63020663 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000471.1 MGP_BALBcJ_G0000409.1 mouse_genomes_project 1 54834043 54835882 + TEC TEC MGP_BALBcJ_T0002942.1 MGP_BALBcJ_G0002764.1 mouse_genomes_project 1 176736104 176736851 - Gm26801 antisense antisense MGP_BALBcJ_T0002943.1 MGP_BALBcJ_G0002764.1 mouse_genomes_project 1 176736813 176752240 - Gm26801 antisense antisense MGP_BALBcJ_T0021433.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92155579 92187675 + MGP_BALBcJ_P0021433 Atg4b protein_coding protein_coding MGP_BALBcJ_T0021434.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92159286 92202613 + MGP_BALBcJ_P0021434 Atg4b protein_coding protein_coding MGP_BALBcJ_T0021435.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92159369 92190280 + MGP_BALBcJ_P0021435 Atg4b protein_coding protein_coding MGP_BALBcJ_T0021436.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92159416 92196924 + MGP_BALBcJ_P0021436 Atg4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021437.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92159426 92200179 + Atg4b protein_coding retained_intron MGP_BALBcJ_T0021438.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92159543 92180220 + Atg4b protein_coding processed_transcript MGP_BALBcJ_T0021439.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92180196 92187440 + Atg4b protein_coding retained_intron MGP_BALBcJ_T0021440.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92196343 92197082 + Atg4b protein_coding retained_intron MGP_BALBcJ_T0021441.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92196797 92199877 + MGP_BALBcJ_P0021441 Atg4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021442.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92197583 92198581 + Atg4b protein_coding retained_intron MGP_BALBcJ_T0021443.1 MGP_BALBcJ_G0016285.1 mouse_genomes_project 1 92198218 92199899 + Atg4b protein_coding retained_intron MGP_BALBcJ_T0000558.1 MGP_BALBcJ_G0000496.1 mouse_genomes_project 1 90298623 90301919 + TEC TEC MGP_BALBcJ_T0021576.1 MGP_BALBcJ_G0016319.1 mouse_genomes_project 1 105789332 105799276 - MGP_BALBcJ_P0021576 protein_coding protein_coding MGP_BALBcJ_T0021541.1 MGP_BALBcJ_G0016308.1 mouse_genomes_project 1 104232540 104298767 + MGP_BALBcJ_P0021541 Tnfrsf11a protein_coding protein_coding MGP_BALBcJ_T0021542.1 MGP_BALBcJ_G0016308.1 mouse_genomes_project 1 104232572 104266728 + Tnfrsf11a protein_coding retained_intron MGP_BALBcJ_T0021543.1 MGP_BALBcJ_G0016308.1 mouse_genomes_project 1 104272172 104277974 + Tnfrsf11a protein_coding retained_intron MGP_BALBcJ_T0021830.1 MGP_BALBcJ_G0016372.1 mouse_genomes_project 1 127041345 127071059 - MGP_BALBcJ_P0021830 Mcm6 protein_coding protein_coding MGP_BALBcJ_T0021831.1 MGP_BALBcJ_G0016372.1 mouse_genomes_project 1 127041348 127071042 - MGP_BALBcJ_P0021831 Mcm6 protein_coding protein_coding MGP_BALBcJ_T0021832.1 MGP_BALBcJ_G0016372.1 mouse_genomes_project 1 127049163 127056108 - Mcm6 protein_coding retained_intron MGP_BALBcJ_T0021833.1 MGP_BALBcJ_G0016372.1 mouse_genomes_project 1 127050942 127053496 - Mcm6 protein_coding retained_intron MGP_BALBcJ_T0023847.1 MGP_BALBcJ_G0016811.1 mouse_genomes_project 1 180309954 180323981 - MGP_BALBcJ_P0023847 H3f3a protein_coding protein_coding MGP_BALBcJ_T0023848.1 MGP_BALBcJ_G0016811.1 mouse_genomes_project 1 180311853 180323883 - MGP_BALBcJ_P0023848 H3f3a protein_coding protein_coding MGP_BALBcJ_T0023849.1 MGP_BALBcJ_G0016811.1 mouse_genomes_project 1 180311853 180324292 - MGP_BALBcJ_P0023849 H3f3a protein_coding protein_coding MGP_BALBcJ_T0023850.1 MGP_BALBcJ_G0016811.1 mouse_genomes_project 1 180318513 180323952 - H3f3a protein_coding retained_intron MGP_BALBcJ_T0023851.1 MGP_BALBcJ_G0016811.1 mouse_genomes_project 1 180318965 180323952 - MGP_BALBcJ_P0023851 H3f3a protein_coding protein_coding MGP_BALBcJ_T0023852.1 MGP_BALBcJ_G0016811.1 mouse_genomes_project 1 180318973 180323952 - MGP_BALBcJ_P0023852 H3f3a protein_coding protein_coding MGP_BALBcJ_T0000504.1 MGP_BALBcJ_G0000442.1 mouse_genomes_project 1 66745760 66749034 - TEC TEC MGP_BALBcJ_T0018945.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13704826 13719974 - MGP_BALBcJ_P0018945 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018946.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13705867 13720132 - MGP_BALBcJ_P0018946 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018947.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13706242 13720108 - MGP_BALBcJ_P0018947 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018948.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13706269 13720128 - MGP_BALBcJ_P0018948 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018949.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13706291 13720004 - MGP_BALBcJ_P0018949 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018950.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13706443 13711113 - MGP_BALBcJ_P0018950 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018951.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13706573 13719715 - MGP_BALBcJ_P0018951 Tceb1 protein_coding protein_coding MGP_BALBcJ_T0018952.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13709905 13719990 - Tceb1 protein_coding retained_intron MGP_BALBcJ_T0018953.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13710024 13720005 - Tceb1 protein_coding retained_intron MGP_BALBcJ_T0018954.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13710754 13719968 - Tceb1 protein_coding retained_intron MGP_BALBcJ_T0018955.1 MGP_BALBcJ_G0015794.1 mouse_genomes_project 1 13710809 13720132 - Tceb1 protein_coding retained_intron MGP_BALBcJ_T0021709.1 MGP_BALBcJ_G0016349.1 mouse_genomes_project 1 118986742 118989333 + MGP_BALBcJ_P0021709 C1ql2 protein_coding protein_coding MGP_BALBcJ_T0011994.1 MGP_BALBcJ_G0010091.1 mouse_genomes_project 1 45470765 45471592 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020259.1 MGP_BALBcJ_G0016051.1 mouse_genomes_project 1 64436267 64665835 + MGP_BALBcJ_P0020259 Unc80 protein_coding protein_coding MGP_BALBcJ_T0020260.1 MGP_BALBcJ_G0016051.1 mouse_genomes_project 1 64436314 64479090 + MGP_BALBcJ_P0020260 Unc80 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020261.1 MGP_BALBcJ_G0016051.1 mouse_genomes_project 1 64436330 64455070 + Unc80 protein_coding retained_intron MGP_BALBcJ_T0020262.1 MGP_BALBcJ_G0016051.1 mouse_genomes_project 1 64436347 64665119 + MGP_BALBcJ_P0020262 Unc80 protein_coding unknown_likely_coding MGP_BALBcJ_T0020263.1 MGP_BALBcJ_G0016051.1 mouse_genomes_project 1 64639859 64640436 + Unc80 protein_coding retained_intron MGP_BALBcJ_T0020264.1 MGP_BALBcJ_G0016051.1 mouse_genomes_project 1 64645933 64662632 + MGP_BALBcJ_P0020264 Unc80 protein_coding protein_coding MGP_BALBcJ_T0011968.1 MGP_BALBcJ_G0010065.1 mouse_genomes_project 1 40650035 40650488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000457.1 MGP_BALBcJ_G0000395.1 mouse_genomes_project 1 42795365 42802582 - TEC TEC MGP_BALBcJ_T0022583.1 MGP_BALBcJ_G0016533.1 mouse_genomes_project 1 151801017 151838075 + MGP_BALBcJ_P0022583 Ncf2 protein_coding protein_coding MGP_BALBcJ_T0022584.1 MGP_BALBcJ_G0016533.1 mouse_genomes_project 1 151808642 151824953 + MGP_BALBcJ_P0022584 Ncf2 protein_coding protein_coding MGP_BALBcJ_T0022585.1 MGP_BALBcJ_G0016533.1 mouse_genomes_project 1 151808695 151838074 + MGP_BALBcJ_P0022585 Ncf2 protein_coding protein_coding MGP_BALBcJ_T0022586.1 MGP_BALBcJ_G0016533.1 mouse_genomes_project 1 151808783 151813401 + Ncf2 protein_coding retained_intron MGP_BALBcJ_T0022587.1 MGP_BALBcJ_G0016533.1 mouse_genomes_project 1 151811652 151824952 + Ncf2 protein_coding retained_intron MGP_BALBcJ_T0022588.1 MGP_BALBcJ_G0016533.1 mouse_genomes_project 1 151824229 151825145 + Ncf2 protein_coding retained_intron MGP_BALBcJ_T0009489.1 MGP_BALBcJ_G0007614.1 mouse_genomes_project 1 84773853 84773910 - Gm22955 miRNA miRNA MGP_BALBcJ_T0011879.1 MGP_BALBcJ_G0009976.1 mouse_genomes_project 1 12808065 12808612 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019450.1 MGP_BALBcJ_G0015899.1 mouse_genomes_project 1 36991017 37046527 - MGP_BALBcJ_P0019450 Rfx8 protein_coding protein_coding MGP_BALBcJ_T0019451.1 MGP_BALBcJ_G0015899.1 mouse_genomes_project 1 37006652 37017585 - Rfx8 protein_coding processed_transcript MGP_BALBcJ_T0006021.1 MGP_BALBcJ_G0005042.1 mouse_genomes_project 1 186988733 187003604 + Gm37896 lincRNA lincRNA MGP_BALBcJ_T0000409.1 MGP_BALBcJ_G0000348.1 mouse_genomes_project 1 22886515 22889226 - TEC TEC MGP_BALBcJ_T0020164.1 MGP_BALBcJ_G0016031.1 mouse_genomes_project 1 61751088 61767971 - MGP_BALBcJ_P0020164 4933402D24Rik protein_coding protein_coding MGP_BALBcJ_T0019559.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472350 41488099 - MGP_BALBcJ_P0019559 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019560.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472353 41488146 - MGP_BALBcJ_P0019560 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019561.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472547 41488070 - MGP_BALBcJ_P0019561 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019562.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472547 41488051 - MGP_BALBcJ_P0019562 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019563.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472597 41488131 - MGP_BALBcJ_P0019563 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019564.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472598 41488149 - MGP_BALBcJ_P0019564 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019565.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472599 41487384 - MGP_BALBcJ_P0019565 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019566.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41472766 41488141 - MGP_BALBcJ_P0019566 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019567.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41473638 41488109 - MGP_BALBcJ_P0019567 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019568.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41473754 41487721 - MGP_BALBcJ_P0019568 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019569.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41474239 41488122 - MGP_BALBcJ_P0019569 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019570.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41474245 41488145 - MGP_BALBcJ_P0019570 Tex30 protein_coding protein_coding MGP_BALBcJ_T0019571.1 MGP_BALBcJ_G0015924.1 mouse_genomes_project 1 41474251 41485714 - MGP_BALBcJ_P0019571 Tex30 protein_coding protein_coding MGP_BALBcJ_T0020405.1 MGP_BALBcJ_G0016083.1 mouse_genomes_project 1 72320018 72324917 - MGP_BALBcJ_P0020405 Aamp protein_coding protein_coding MGP_BALBcJ_T0020406.1 MGP_BALBcJ_G0016083.1 mouse_genomes_project 1 72320024 72324195 - Aamp protein_coding retained_intron MGP_BALBcJ_T0020407.1 MGP_BALBcJ_G0016083.1 mouse_genomes_project 1 72320024 72324859 - MGP_BALBcJ_P0020407 Aamp protein_coding protein_coding MGP_BALBcJ_T0020408.1 MGP_BALBcJ_G0016083.1 mouse_genomes_project 1 72321111 72324158 - MGP_BALBcJ_P0020408 Aamp protein_coding protein_coding MGP_BALBcJ_T0020409.1 MGP_BALBcJ_G0016083.1 mouse_genomes_project 1 72321238 72323321 - Aamp protein_coding retained_intron MGP_BALBcJ_T0020410.1 MGP_BALBcJ_G0016083.1 mouse_genomes_project 1 72323374 72324600 - MGP_BALBcJ_P0020410 Aamp protein_coding protein_coding MGP_BALBcJ_T0099084.1 MGP_BALBcJ_G0037120.1 mouse_genomes_project 1 42996094 42996201 - Gm23216 snRNA snRNA MGP_BALBcJ_T0021120.1 MGP_BALBcJ_G0016211.1 mouse_genomes_project 1 86273884 86467228 + MGP_BALBcJ_P0021120 Ugt1a10 protein_coding protein_coding MGP_BALBcJ_T0021121.1 MGP_BALBcJ_G0016211.1 mouse_genomes_project 1 86273907 86472417 + MGP_BALBcJ_P0021121 Ugt1a10 protein_coding protein_coding MGP_BALBcJ_T0021122.1 MGP_BALBcJ_G0016211.1 mouse_genomes_project 1 86273977 86467160 + MGP_BALBcJ_P0021122 Ugt1a10 protein_coding protein_coding MGP_BALBcJ_T0012002.1 MGP_BALBcJ_G0010099.1 mouse_genomes_project 1 46942198 46943614 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005810.1 MGP_BALBcJ_G0004876.1 mouse_genomes_project 1 89785019 89786170 - 1700020N18Rik lincRNA lincRNA MGP_BALBcJ_T0000646.1 MGP_BALBcJ_G0000582.1 mouse_genomes_project 1 136817224 136818366 + TEC TEC MGP_BALBcJ_T0005856.1 MGP_BALBcJ_G0004913.1 mouse_genomes_project 1 119405825 119410952 + Gm29346 lincRNA lincRNA MGP_BALBcJ_T0019896.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56269912 56283770 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019897.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56271723 56272585 - Clk1 protein_coding processed_transcript MGP_BALBcJ_T0019898.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56271723 56273161 - Clk1 protein_coding processed_transcript MGP_BALBcJ_T0019899.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56271723 56276484 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019900.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56271723 56283770 - MGP_BALBcJ_P0019900 Clk1 protein_coding protein_coding MGP_BALBcJ_T0019901.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56271723 56283770 - MGP_BALBcJ_P0019901 Clk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019902.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56271723 56283770 - MGP_BALBcJ_P0019902 Clk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019903.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56272039 56273549 - Clk1 protein_coding processed_transcript MGP_BALBcJ_T0019904.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56274313 56280114 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019905.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56274338 56280974 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019906.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56275861 56283770 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019907.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56276628 56277145 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019908.1 MGP_BALBcJ_G0015988.1 mouse_genomes_project 1 56281341 56283770 - Clk1 protein_coding retained_intron MGP_BALBcJ_T0019102.1 MGP_BALBcJ_G0015834.1 mouse_genomes_project 1 28386207 28479048 - MGP_BALBcJ_P0019102 4931428L18Rik protein_coding protein_coding MGP_BALBcJ_T0019103.1 MGP_BALBcJ_G0015834.1 mouse_genomes_project 1 28392082 28479108 - MGP_BALBcJ_P0019103 4931428L18Rik protein_coding protein_coding MGP_BALBcJ_T0019104.1 MGP_BALBcJ_G0015834.1 mouse_genomes_project 1 28392694 28479079 - MGP_BALBcJ_P0019104 4931428L18Rik protein_coding protein_coding MGP_BALBcJ_T0019107.1 MGP_BALBcJ_G0015834.1 mouse_genomes_project 1 28459860 28479135 - MGP_BALBcJ_P0019107 4931428L18Rik protein_coding protein_coding MGP_BALBcJ_T0022552.1 MGP_BALBcJ_G0016525.1 mouse_genomes_project 1 150569388 150646287 + MGP_BALBcJ_P0022552 Fam129a protein_coding protein_coding MGP_BALBcJ_T0022553.1 MGP_BALBcJ_G0016525.1 mouse_genomes_project 1 150569575 150723053 + MGP_BALBcJ_P0022553 Fam129a protein_coding protein_coding MGP_BALBcJ_T0022554.1 MGP_BALBcJ_G0016525.1 mouse_genomes_project 1 150569654 150720456 + MGP_BALBcJ_P0022554 Fam129a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022555.1 MGP_BALBcJ_G0016525.1 mouse_genomes_project 1 150569698 150691117 + MGP_BALBcJ_P0022555 Fam129a protein_coding protein_coding MGP_BALBcJ_T0022556.1 MGP_BALBcJ_G0016525.1 mouse_genomes_project 1 150678178 150720456 + Fam129a protein_coding processed_transcript MGP_BALBcJ_T0012124.1 MGP_BALBcJ_G0010221.1 mouse_genomes_project 1 95432992 95433956 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022169.1 MGP_BALBcJ_G0016450.1 mouse_genomes_project 1 133208642 133227931 + MGP_BALBcJ_P0022169 Adipor1 protein_coding protein_coding MGP_BALBcJ_T0022170.1 MGP_BALBcJ_G0016450.1 mouse_genomes_project 1 133208720 133227928 + MGP_BALBcJ_P0022170 Adipor1 protein_coding protein_coding MGP_BALBcJ_T0022171.1 MGP_BALBcJ_G0016450.1 mouse_genomes_project 1 133208735 133209205 + Adipor1 protein_coding processed_transcript MGP_BALBcJ_T0022172.1 MGP_BALBcJ_G0016450.1 mouse_genomes_project 1 133208828 133220185 + Adipor1 protein_coding retained_intron MGP_BALBcJ_T0019067.1 MGP_BALBcJ_G0015828.1 mouse_genomes_project 1 21829008 21860150 + MGP_BALBcJ_P0019067 Lmbrd1 protein_coding protein_coding MGP_BALBcJ_T0019068.1 MGP_BALBcJ_G0015828.1 mouse_genomes_project 1 21829087 21878347 + MGP_BALBcJ_P0019068 Lmbrd1 protein_coding protein_coding MGP_BALBcJ_T0019069.1 MGP_BALBcJ_G0015828.1 mouse_genomes_project 1 21829105 21914311 + MGP_BALBcJ_P0019069 Lmbrd1 protein_coding protein_coding MGP_BALBcJ_T0019070.1 MGP_BALBcJ_G0015828.1 mouse_genomes_project 1 21875166 21892685 + Lmbrd1 protein_coding retained_intron MGP_BALBcJ_T0019071.1 MGP_BALBcJ_G0015828.1 mouse_genomes_project 1 21892609 21910276 + MGP_BALBcJ_P0019071 Lmbrd1 protein_coding protein_coding MGP_BALBcJ_T0019176.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31711519 31712814 + Ptpn18 protein_coding retained_intron MGP_BALBcJ_T0019177.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31711522 31725710 + MGP_BALBcJ_P0019177 Ptpn18 protein_coding protein_coding MGP_BALBcJ_T0019178.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31711534 31723876 + MGP_BALBcJ_P0019178 Ptpn18 protein_coding protein_coding MGP_BALBcJ_T0019179.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31711549 31723875 + Ptpn18 protein_coding retained_intron MGP_BALBcJ_T0019180.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31715028 31718576 + Ptpn18 protein_coding retained_intron MGP_BALBcJ_T0019181.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31724645 31727659 + MGP_BALBcJ_P0019181 Ptpn18 protein_coding protein_coding MGP_BALBcJ_T0019182.1 MGP_BALBcJ_G0015847.1 mouse_genomes_project 1 31726424 31727659 + Ptpn18 protein_coding processed_transcript MGP_BALBcJ_T0020754.1 MGP_BALBcJ_G0016137.1 mouse_genomes_project 1 76531331 76535466 - protein_coding processed_transcript MGP_BALBcJ_T0000577.1 MGP_BALBcJ_G0000515.1 mouse_genomes_project 1 106896961 106899719 + TEC TEC MGP_BALBcJ_T0022652.1 MGP_BALBcJ_G0016546.1 mouse_genomes_project 1 152877693 152880699 + MGP_BALBcJ_P0022652 Teddm1b protein_coding protein_coding MGP_BALBcJ_T0023767.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179250446 179309083 - MGP_BALBcJ_P0023767 Ahctf1 protein_coding protein_coding MGP_BALBcJ_T0023768.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179250889 179257962 - MGP_BALBcJ_P0023768 Ahctf1 protein_coding protein_coding MGP_BALBcJ_T0023769.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179251643 179259133 - Ahctf1 protein_coding retained_intron MGP_BALBcJ_T0023770.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179259251 179263542 - MGP_BALBcJ_P0023770 Ahctf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023771.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179265815 179271460 - MGP_BALBcJ_P0023771 Ahctf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023772.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179273847 179276471 - MGP_BALBcJ_P0023772 Ahctf1 protein_coding protein_coding MGP_BALBcJ_T0023773.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179298393 179301549 - Ahctf1 protein_coding retained_intron MGP_BALBcJ_T0023774.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179304244 179307475 - Ahctf1 protein_coding retained_intron MGP_BALBcJ_T0023775.1 MGP_BALBcJ_G0016800.1 mouse_genomes_project 1 179304250 179309009 - Ahctf1 protein_coding retained_intron MGP_BALBcJ_T0009521.1 MGP_BALBcJ_G0007646.1 mouse_genomes_project 1 161263055 161263165 + Mir214 miRNA miRNA MGP_BALBcJ_T0019605.1 MGP_BALBcJ_G0015931.1 mouse_genomes_project 1 42681882 42812813 - MGP_BALBcJ_P0019605 Col5a2 protein_coding protein_coding MGP_BALBcJ_T0019606.1 MGP_BALBcJ_G0015931.1 mouse_genomes_project 1 42696632 42701236 - Col5a2 protein_coding retained_intron MGP_BALBcJ_T0019607.1 MGP_BALBcJ_G0015931.1 mouse_genomes_project 1 42722523 42812813 - Col5a2 protein_coding retained_intron MGP_BALBcJ_T0019608.1 MGP_BALBcJ_G0015931.1 mouse_genomes_project 1 42725772 42730708 - Col5a2 protein_coding retained_intron MGP_BALBcJ_T0023204.1 MGP_BALBcJ_G0016648.1 mouse_genomes_project 1 165467425 165488166 - MGP_BALBcJ_P0023204 Gm4846 protein_coding protein_coding MGP_BALBcJ_T0002900.1 MGP_BALBcJ_G0002730.1 mouse_genomes_project 1 155266925 155268419 + 4930518J20Rik antisense antisense MGP_BALBcJ_T0012040.1 MGP_BALBcJ_G0010137.1 mouse_genomes_project 1 58858572 58859056 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000500.1 MGP_BALBcJ_G0000438.1 mouse_genomes_project 1 66117666 66119586 - TEC TEC MGP_BALBcJ_T0100388.1 MGP_BALBcJ_G0038424.1 mouse_genomes_project 1 152436242 152436382 + Gm25588 snoRNA snoRNA MGP_BALBcJ_T0011922.1 MGP_BALBcJ_G0010019.1 mouse_genomes_project 1 26192048 26192352 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000572.1 MGP_BALBcJ_G0000510.1 mouse_genomes_project 1 104159553 104163907 + TEC TEC MGP_BALBcJ_T0005835.1 MGP_BALBcJ_G0004897.1 mouse_genomes_project 1 104610330 104629228 - Gm20753 lincRNA lincRNA MGP_BALBcJ_T0023299.1 MGP_BALBcJ_G0016676.1 mouse_genomes_project 1 169891481 169892298 + MGP_BALBcJ_P0023299 Gm26620 protein_coding protein_coding MGP_BALBcJ_T0000487.1 MGP_BALBcJ_G0000425.1 mouse_genomes_project 1 59778582 59779502 + TEC TEC MGP_BALBcJ_T0000604.1 MGP_BALBcJ_G0000542.1 mouse_genomes_project 1 126684466 126690451 - TEC TEC MGP_BALBcJ_T0000385.1 MGP_BALBcJ_G0000326.1 mouse_genomes_project 1 13253635 13255956 - TEC TEC MGP_BALBcJ_T0020398.1 MGP_BALBcJ_G0016080.1 mouse_genomes_project 1 72230398 72233245 - MGP_BALBcJ_P0020398 Cxcr1 protein_coding protein_coding MGP_BALBcJ_T0020399.1 MGP_BALBcJ_G0016080.1 mouse_genomes_project 1 72230398 72231849 - MGP_BALBcJ_P0020399 Cxcr1 protein_coding protein_coding MGP_BALBcJ_T0019956.1 MGP_BALBcJ_G0015996.1 mouse_genomes_project 1 56690267 56738628 + MGP_BALBcJ_P0019956 Casp8 protein_coding protein_coding MGP_BALBcJ_T0019957.1 MGP_BALBcJ_G0015996.1 mouse_genomes_project 1 56690370 56737879 + MGP_BALBcJ_P0019957 Casp8 protein_coding protein_coding MGP_BALBcJ_T0019958.1 MGP_BALBcJ_G0015996.1 mouse_genomes_project 1 56697330 56738133 + MGP_BALBcJ_P0019958 Casp8 protein_coding protein_coding MGP_BALBcJ_T0019959.1 MGP_BALBcJ_G0015996.1 mouse_genomes_project 1 56697481 56737879 + MGP_BALBcJ_P0019959 Casp8 protein_coding protein_coding MGP_BALBcJ_T0005627.1 MGP_BALBcJ_G0004737.1 mouse_genomes_project 1 10105970 10115604 + Gm29283 lincRNA lincRNA MGP_BALBcJ_T0020662.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73360542 73418684 + MGP_BALBcJ_P0020662 Speg protein_coding protein_coding MGP_BALBcJ_T0020663.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73367359 73373574 + MGP_BALBcJ_P0020663 Speg protein_coding protein_coding MGP_BALBcJ_T0020664.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73367359 73390366 + MGP_BALBcJ_P0020664 Speg protein_coding protein_coding MGP_BALBcJ_T0020665.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73367371 73368628 + Speg protein_coding retained_intron MGP_BALBcJ_T0020666.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73367383 73373124 + MGP_BALBcJ_P0020666 Speg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020667.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73368801 73370204 + Speg protein_coding processed_transcript MGP_BALBcJ_T0020668.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73369928 73373177 + Speg protein_coding retained_intron MGP_BALBcJ_T0020669.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73370056 73377727 + MGP_BALBcJ_P0020669 Speg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020670.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73370740 73374333 + Speg protein_coding processed_transcript MGP_BALBcJ_T0020671.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73370838 73418668 + MGP_BALBcJ_P0020671 Speg protein_coding protein_coding MGP_BALBcJ_T0020672.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73385887 73389793 + MGP_BALBcJ_P0020672 Speg protein_coding protein_coding MGP_BALBcJ_T0020673.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73386323 73390173 + MGP_BALBcJ_P0020673 Speg protein_coding protein_coding MGP_BALBcJ_T0020674.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73386437 73390365 + MGP_BALBcJ_P0020674 Speg protein_coding protein_coding MGP_BALBcJ_T0020675.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73386812 73390010 + MGP_BALBcJ_P0020675 Speg protein_coding protein_coding MGP_BALBcJ_T0020676.1 MGP_BALBcJ_G0016124.1 mouse_genomes_project 1 73409663 73413987 + Speg protein_coding retained_intron MGP_BALBcJ_T0101581.1 MGP_BALBcJ_G0039614.1 mouse_genomes_project 1 77018355 77018504 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0099135.1 MGP_BALBcJ_G0037171.1 mouse_genomes_project 1 148640521 148640627 - Gm23535 snRNA snRNA MGP_BALBcJ_T0021860.1 MGP_BALBcJ_G0016380.1 mouse_genomes_project 1 129436551 129481780 - MGP_BALBcJ_P0021860 Gm29427 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009537.1 MGP_BALBcJ_G0007662.1 mouse_genomes_project 1 184828776 184828888 + Mir215 miRNA miRNA MGP_BALBcJ_T0005750.1 MGP_BALBcJ_G0004828.1 mouse_genomes_project 1 69984257 70031306 - 4933417E11Rik lincRNA lincRNA MGP_BALBcJ_T0024275.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192754257 192891612 + MGP_BALBcJ_P0024275 Lamb3 protein_coding protein_coding MGP_BALBcJ_T0024276.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192754264 192873720 + MGP_BALBcJ_P0024276 Lamb3 protein_coding protein_coding MGP_BALBcJ_T0024277.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192754282 192800969 + Lamb3 protein_coding processed_transcript MGP_BALBcJ_T0024286.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192819855 192827072 + Lamb3 protein_coding processed_transcript MGP_BALBcJ_T0024287.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192849365 192891612 + MGP_BALBcJ_P0024287 Lamb3 protein_coding protein_coding MGP_BALBcJ_T0024288.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192849594 192850846 + Lamb3 protein_coding processed_transcript MGP_BALBcJ_T0024289.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192849616 192891609 + MGP_BALBcJ_P0024289 Lamb3 protein_coding protein_coding MGP_BALBcJ_T0024290.1 MGP_BALBcJ_G0016898.1 mouse_genomes_project 1 192868425 192873719 + Lamb3 protein_coding processed_transcript MGP_BALBcJ_T0011920.1 MGP_BALBcJ_G0010017.1 mouse_genomes_project 1 25799516 25799790 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002778.1 MGP_BALBcJ_G0002639.1 mouse_genomes_project 1 41128715 41130650 - Gm29155 antisense antisense MGP_BALBcJ_T0002779.1 MGP_BALBcJ_G0002639.1 mouse_genomes_project 1 41130338 41130607 - Gm29155 antisense antisense MGP_BALBcJ_T0012068.1 MGP_BALBcJ_G0010165.1 mouse_genomes_project 1 66287408 66287855 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100364.1 MGP_BALBcJ_G0038400.1 mouse_genomes_project 1 98680899 98681031 - Gm23602 snoRNA snoRNA MGP_BALBcJ_T0023708.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176752185 176756066 + MGP_BALBcJ_P0023708 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023709.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176752193 176756115 + MGP_BALBcJ_P0023709 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023710.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176753264 176760095 + MGP_BALBcJ_P0023710 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023711.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176753618 176756758 + MGP_BALBcJ_P0023711 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023712.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176753622 176760095 + MGP_BALBcJ_P0023712 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023713.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176753630 176756556 + MGP_BALBcJ_P0023713 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023714.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176753706 176756488 + MGP_BALBcJ_P0023714 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023715.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176753907 176760091 + MGP_BALBcJ_P0023715 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0023716.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176754600 176755475 + Zbtb18 protein_coding processed_transcript MGP_BALBcJ_T0023717.1 MGP_BALBcJ_G0016784.1 mouse_genomes_project 1 176754790 176760095 + MGP_BALBcJ_P0023717 Zbtb18 protein_coding protein_coding MGP_BALBcJ_T0012306.1 MGP_BALBcJ_G0010403.1 mouse_genomes_project 1 170433508 170433844 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012119.1 MGP_BALBcJ_G0010216.1 mouse_genomes_project 1 91706184 91706730 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021084.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85904831 85923326 + MGP_BALBcJ_P0021084 Atg16l1 protein_coding protein_coding MGP_BALBcJ_T0021085.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85904974 85944054 + MGP_BALBcJ_P0021085 Atg16l1 protein_coding protein_coding MGP_BALBcJ_T0021086.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85905017 85921384 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0021087.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85905037 85937825 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0021088.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85905037 85944048 + MGP_BALBcJ_P0021088 Atg16l1 protein_coding protein_coding MGP_BALBcJ_T0021089.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85905047 85944051 + MGP_BALBcJ_P0021089 Atg16l1 protein_coding protein_coding MGP_BALBcJ_T0021090.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85905049 85944051 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0021091.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85905054 85919769 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0021092.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85918686 85926796 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0021093.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85927218 85930612 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0021094.1 MGP_BALBcJ_G0016207.1 mouse_genomes_project 1 85930111 85940188 + Atg16l1 protein_coding retained_intron MGP_BALBcJ_T0000679.1 MGP_BALBcJ_G0000615.1 mouse_genomes_project 1 152894333 152896890 - TEC TEC MGP_BALBcJ_T0018884.1 MGP_BALBcJ_G0015780.1 mouse_genomes_project 1 10590678 10615914 - MGP_BALBcJ_P0018884 Tram1 protein_coding protein_coding MGP_BALBcJ_T0018885.1 MGP_BALBcJ_G0015780.1 mouse_genomes_project 1 10602081 10605734 - Tram1 protein_coding retained_intron MGP_BALBcJ_T0018886.1 MGP_BALBcJ_G0015780.1 mouse_genomes_project 1 10604055 10615879 - MGP_BALBcJ_P0018886 Tram1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009528.1 MGP_BALBcJ_G0007653.1 mouse_genomes_project 1 170103773 170103835 - Gm27844 miRNA miRNA MGP_BALBcJ_T0011843.1 MGP_BALBcJ_G0009940.1 mouse_genomes_project 1 3418278 3418751 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012352.1 MGP_BALBcJ_G0010449.1 mouse_genomes_project 1 194384210 194384568 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098794.1 MGP_BALBcJ_G0036847.1 mouse_genomes_project 1 87914038 87921876 + Gm28499 sense_intronic sense_intronic MGP_BALBcJ_T0020856.1 MGP_BALBcJ_G0016160.1 mouse_genomes_project 1 81181935 81183394 + MGP_BALBcJ_P0020856 Krtap28-13 protein_coding protein_coding MGP_BALBcJ_T0000578.1 MGP_BALBcJ_G0000516.1 mouse_genomes_project 1 109430604 109436496 - TEC TEC MGP_BALBcJ_T0011941.1 MGP_BALBcJ_G0010038.1 mouse_genomes_project 1 30896037 30896365 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022823.1 MGP_BALBcJ_G0016576.1 mouse_genomes_project 1 157247830 157351659 - MGP_BALBcJ_P0022823 Brinp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022824.1 MGP_BALBcJ_G0016576.1 mouse_genomes_project 1 157247830 157351756 - MGP_BALBcJ_P0022824 Brinp2 protein_coding protein_coding MGP_BALBcJ_T0022825.1 MGP_BALBcJ_G0016576.1 mouse_genomes_project 1 157298019 157298780 - Brinp2 protein_coding processed_transcript MGP_BALBcJ_T0022826.1 MGP_BALBcJ_G0016576.1 mouse_genomes_project 1 157347705 157351725 - Brinp2 protein_coding retained_intron MGP_BALBcJ_T0098798.1 MGP_BALBcJ_G0036851.1 mouse_genomes_project 1 134226891 134231456 - Gm28277 sense_intronic sense_intronic MGP_BALBcJ_T0019506.1 MGP_BALBcJ_G0015911.1 mouse_genomes_project 1 38148983 38199071 + MGP_BALBcJ_P0019506 Tmem182 protein_coding protein_coding MGP_BALBcJ_T0000530.1 MGP_BALBcJ_G0000468.1 mouse_genomes_project 1 80903730 80904776 - TEC TEC MGP_BALBcJ_T0020536.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73118571 73126658 - MGP_BALBcJ_P0020536 Cnppd1 protein_coding protein_coding MGP_BALBcJ_T0020537.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73119785 73125709 - MGP_BALBcJ_P0020537 Cnppd1 protein_coding protein_coding MGP_BALBcJ_T0020538.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73119788 73122894 - Cnppd1 protein_coding retained_intron MGP_BALBcJ_T0020539.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73119788 73126717 - MGP_BALBcJ_P0020539 Cnppd1 protein_coding protein_coding MGP_BALBcJ_T0020540.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73120802 73121879 - Cnppd1 protein_coding retained_intron MGP_BALBcJ_T0020541.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73121110 73121824 - Cnppd1 protein_coding retained_intron MGP_BALBcJ_T0020542.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73123364 73125821 - MGP_BALBcJ_P0020542 Cnppd1 protein_coding protein_coding MGP_BALBcJ_T0020543.1 MGP_BALBcJ_G0016109.1 mouse_genomes_project 1 73123614 73126731 - MGP_BALBcJ_P0020543 Cnppd1 protein_coding protein_coding MGP_BALBcJ_T0006028.1 MGP_BALBcJ_G0005049.1 mouse_genomes_project 1 190805711 190807093 + D730003I15Rik lincRNA lincRNA MGP_BALBcJ_T0006029.1 MGP_BALBcJ_G0005049.1 mouse_genomes_project 1 190805731 190807398 + D730003I15Rik lincRNA lincRNA MGP_BALBcJ_T0022528.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150348742 150424918 - MGP_BALBcJ_P0022528 Swt1 protein_coding protein_coding MGP_BALBcJ_T0022529.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150349407 150424899 - MGP_BALBcJ_P0022529 Swt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022530.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150351427 150353408 - Swt1 protein_coding retained_intron MGP_BALBcJ_T0022531.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150361213 150366095 - Swt1 protein_coding retained_intron MGP_BALBcJ_T0022532.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150372838 150399466 - MGP_BALBcJ_P0022532 Swt1 protein_coding protein_coding MGP_BALBcJ_T0022533.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150397561 150420004 - MGP_BALBcJ_P0022533 Swt1 protein_coding protein_coding MGP_BALBcJ_T0022534.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150398196 150401046 - Swt1 protein_coding retained_intron MGP_BALBcJ_T0022535.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150407596 150409418 - Swt1 protein_coding retained_intron MGP_BALBcJ_T0022536.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150412757 150419793 - Swt1 protein_coding retained_intron MGP_BALBcJ_T0022537.1 MGP_BALBcJ_G0016522.1 mouse_genomes_project 1 150423486 150424918 - Swt1 protein_coding retained_intron MGP_BALBcJ_T0005720.1 MGP_BALBcJ_G0004805.1 mouse_genomes_project 1 58728312 58733201 - Gm11579 lincRNA lincRNA MGP_BALBcJ_T0102051.1 MGP_BALBcJ_G0039868.1 mouse_genomes_project 1 18497994 18501412 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011876.1 MGP_BALBcJ_G0009973.1 mouse_genomes_project 1 10099168 10099489 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000747.1 MGP_BALBcJ_G0000683.1 mouse_genomes_project 1 176372910 176374211 - TEC TEC MGP_BALBcJ_T0005703.1 MGP_BALBcJ_G0004793.1 mouse_genomes_project 1 49291687 49293284 - Gm28055 lincRNA lincRNA MGP_BALBcJ_T0005704.1 MGP_BALBcJ_G0004793.1 mouse_genomes_project 1 49292508 49341060 - Gm28055 lincRNA lincRNA MGP_BALBcJ_T0000499.1 MGP_BALBcJ_G0000437.1 mouse_genomes_project 1 65892123 65894424 + TEC TEC MGP_BALBcJ_T0019637.1 MGP_BALBcJ_G0015940.1 mouse_genomes_project 1 48508291 48521446 + Tmeff2 protein_coding processed_transcript MGP_BALBcJ_T0019638.1 MGP_BALBcJ_G0015940.1 mouse_genomes_project 1 48508291 48522883 + Tmeff2 protein_coding processed_transcript MGP_BALBcJ_T0019639.1 MGP_BALBcJ_G0015940.1 mouse_genomes_project 1 48517479 48587630 + MGP_BALBcJ_P0019639 Tmeff2 protein_coding protein_coding MGP_BALBcJ_T0019640.1 MGP_BALBcJ_G0015940.1 mouse_genomes_project 1 48535190 48798547 + MGP_BALBcJ_P0019640 Tmeff2 protein_coding protein_coding MGP_BALBcJ_T0011866.1 MGP_BALBcJ_G0009963.1 mouse_genomes_project 1 6589687 6590621 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012054.1 MGP_BALBcJ_G0010151.1 mouse_genomes_project 1 62143756 62144221 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000745.1 MGP_BALBcJ_G0000681.1 mouse_genomes_project 1 176333076 176334973 - TEC TEC MGP_BALBcJ_T0012259.1 MGP_BALBcJ_G0010356.1 mouse_genomes_project 1 150519927 150520168 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020400.1 MGP_BALBcJ_G0016081.1 mouse_genomes_project 1 72275886 72276691 + MGP_BALBcJ_P0020400 Arpc2 protein_coding protein_coding MGP_BALBcJ_T0020401.1 MGP_BALBcJ_G0016081.1 mouse_genomes_project 1 72276299 72308384 + MGP_BALBcJ_P0020401 Arpc2 protein_coding protein_coding MGP_BALBcJ_T0020402.1 MGP_BALBcJ_G0016081.1 mouse_genomes_project 1 72276319 72308162 + MGP_BALBcJ_P0020402 Arpc2 protein_coding protein_coding MGP_BALBcJ_T0020403.1 MGP_BALBcJ_G0016081.1 mouse_genomes_project 1 72276352 72308163 + MGP_BALBcJ_P0020403 Arpc2 protein_coding protein_coding MGP_BALBcJ_T0000533.1 MGP_BALBcJ_G0000471.1 mouse_genomes_project 1 81547511 81548314 - TEC TEC MGP_BALBcJ_T0011997.1 MGP_BALBcJ_G0010094.1 mouse_genomes_project 1 46254177 46255620 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023727.1 MGP_BALBcJ_G0016789.1 mouse_genomes_project 1 177813147 177816353 + Cox20 protein_coding retained_intron MGP_BALBcJ_T0023728.1 MGP_BALBcJ_G0016789.1 mouse_genomes_project 1 177813147 177816711 + MGP_BALBcJ_P0023728 Cox20 protein_coding protein_coding MGP_BALBcJ_T0000719.1 MGP_BALBcJ_G0000655.1 mouse_genomes_project 1 163434565 163436847 + TEC TEC MGP_BALBcJ_T0020040.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58018960 58052020 - MGP_BALBcJ_P0020040 Wdr12 protein_coding protein_coding MGP_BALBcJ_T0020041.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58030875 58052757 - MGP_BALBcJ_P0020041 Wdr12 protein_coding protein_coding MGP_BALBcJ_T0020042.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58030875 58052258 - MGP_BALBcJ_P0020042 Wdr12 protein_coding protein_coding MGP_BALBcJ_T0020043.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58037073 58039747 - Wdr12 protein_coding retained_intron MGP_BALBcJ_T0020044.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58037783 58039924 - Wdr12 protein_coding processed_transcript MGP_BALBcJ_T0020045.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58042023 58052247 - MGP_BALBcJ_P0020045 Wdr12 protein_coding protein_coding MGP_BALBcJ_T0020046.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58042023 58052237 - MGP_BALBcJ_P0020046 Wdr12 protein_coding protein_coding MGP_BALBcJ_T0020047.1 MGP_BALBcJ_G0016011.1 mouse_genomes_project 1 58048000 58051809 - Wdr12 protein_coding retained_intron MGP_BALBcJ_T0005652.1 MGP_BALBcJ_G0004760.1 mouse_genomes_project 1 32904216 32930188 - Gm37068 lincRNA lincRNA MGP_BALBcJ_T0021263.1 MGP_BALBcJ_G0016248.1 mouse_genomes_project 1 89871114 89904390 + MGP_BALBcJ_P0021263 Traf3ip1 protein_coding protein_coding MGP_BALBcJ_T0021264.1 MGP_BALBcJ_G0016248.1 mouse_genomes_project 1 89871161 89905752 + MGP_BALBcJ_P0021264 Traf3ip1 protein_coding protein_coding MGP_BALBcJ_T0021265.1 MGP_BALBcJ_G0016248.1 mouse_genomes_project 1 89894727 89905752 + Traf3ip1 protein_coding retained_intron MGP_BALBcJ_T0012324.1 MGP_BALBcJ_G0010421.1 mouse_genomes_project 1 180586926 180587573 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018763.1 MGP_BALBcJ_G0015764.1 mouse_genomes_project 1 6714349 6748385 - MGP_BALBcJ_P0018763 Mybl1 protein_coding protein_coding MGP_BALBcJ_T0018764.1 MGP_BALBcJ_G0015764.1 mouse_genomes_project 1 6717439 6748200 - MGP_BALBcJ_P0018764 Mybl1 protein_coding protein_coding MGP_BALBcJ_T0018765.1 MGP_BALBcJ_G0015764.1 mouse_genomes_project 1 6724028 6726507 - Mybl1 protein_coding retained_intron MGP_BALBcJ_T0018766.1 MGP_BALBcJ_G0015764.1 mouse_genomes_project 1 6726168 6731357 - Mybl1 protein_coding retained_intron MGP_BALBcJ_T0018767.1 MGP_BALBcJ_G0015764.1 mouse_genomes_project 1 6729759 6747830 - MGP_BALBcJ_P0018767 Mybl1 protein_coding protein_coding MGP_BALBcJ_T0002892.1 MGP_BALBcJ_G0002724.1 mouse_genomes_project 1 150320666 150325132 - Gm10138 antisense antisense MGP_BALBcJ_T0002893.1 MGP_BALBcJ_G0002724.1 mouse_genomes_project 1 150323795 150326281 - Gm10138 antisense antisense MGP_BALBcJ_T0002894.1 MGP_BALBcJ_G0002724.1 mouse_genomes_project 1 150325418 150325786 - Gm10138 antisense pseudogene MGP_BALBcJ_T0022126.1 MGP_BALBcJ_G0016439.1 mouse_genomes_project 1 132831755 132845434 + MGP_BALBcJ_P0022126 Fmod protein_coding protein_coding MGP_BALBcJ_T0022127.1 MGP_BALBcJ_G0016439.1 mouse_genomes_project 1 132831997 132834976 + MGP_BALBcJ_P0022127 Fmod protein_coding protein_coding MGP_BALBcJ_T0023377.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170344151 170349336 - Ppox protein_coding retained_intron MGP_BALBcJ_T0023378.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170345122 170349336 - Ppox protein_coding retained_intron MGP_BALBcJ_T0023379.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170345122 170349336 - MGP_BALBcJ_P0023379 Ppox protein_coding protein_coding MGP_BALBcJ_T0023380.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170345577 170348909 - MGP_BALBcJ_P0023380 Ppox protein_coding protein_coding MGP_BALBcJ_T0023381.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170346265 170347962 - Ppox protein_coding retained_intron MGP_BALBcJ_T0023382.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170347995 170348671 - Ppox protein_coding processed_transcript MGP_BALBcJ_T0023383.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170348242 170349336 - Ppox protein_coding retained_intron MGP_BALBcJ_T0023384.1 MGP_BALBcJ_G0016693.1 mouse_genomes_project 1 170348513 170349269 - Ppox protein_coding retained_intron MGP_BALBcJ_T0011955.1 MGP_BALBcJ_G0010052.1 mouse_genomes_project 1 32258171 32258406 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002869.1 MGP_BALBcJ_G0002707.1 mouse_genomes_project 1 131835523 131853834 - Gm28609 antisense antisense MGP_BALBcJ_T0019099.1 MGP_BALBcJ_G0015833.1 mouse_genomes_project 1 28195491 28205733 - MGP_BALBcJ_P0019099 protein_coding protein_coding MGP_BALBcJ_T0019100.1 MGP_BALBcJ_G0015833.1 mouse_genomes_project 1 28198412 28199496 - protein_coding retained_intron MGP_BALBcJ_T0019101.1 MGP_BALBcJ_G0015833.1 mouse_genomes_project 1 28202517 28205550 - MGP_BALBcJ_P0019101 protein_coding protein_coding MGP_BALBcJ_T0021123.1 MGP_BALBcJ_G0016212.1 mouse_genomes_project 1 86282383 86472410 + MGP_BALBcJ_P0021123 Ugt1a9 protein_coding protein_coding MGP_BALBcJ_T0023080.1 MGP_BALBcJ_G0016625.1 mouse_genomes_project 1 163299222 163317386 - MGP_BALBcJ_P0023080 Blzf1 protein_coding protein_coding MGP_BALBcJ_T0023081.1 MGP_BALBcJ_G0016625.1 mouse_genomes_project 1 163300811 163317391 - MGP_BALBcJ_P0023081 Blzf1 protein_coding protein_coding MGP_BALBcJ_T0023082.1 MGP_BALBcJ_G0016625.1 mouse_genomes_project 1 163301552 163317391 - MGP_BALBcJ_P0023082 Blzf1 protein_coding protein_coding MGP_BALBcJ_T0023083.1 MGP_BALBcJ_G0016625.1 mouse_genomes_project 1 163309443 163317174 - Blzf1 protein_coding processed_transcript MGP_BALBcJ_T0023085.1 MGP_BALBcJ_G0016625.1 mouse_genomes_project 1 163315103 163317373 - Blzf1 protein_coding retained_intron MGP_BALBcJ_T0024178.1 MGP_BALBcJ_G0016882.1 mouse_genomes_project 1 191127750 191165859 - MGP_BALBcJ_P0024178 Dtl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024179.1 MGP_BALBcJ_G0016882.1 mouse_genomes_project 1 191127759 191165882 - MGP_BALBcJ_P0024179 Dtl protein_coding protein_coding MGP_BALBcJ_T0024180.1 MGP_BALBcJ_G0016882.1 mouse_genomes_project 1 191129513 191165852 - Dtl protein_coding processed_transcript MGP_BALBcJ_T0024181.1 MGP_BALBcJ_G0016882.1 mouse_genomes_project 1 191140172 191165851 - MGP_BALBcJ_P0024181 Dtl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024182.1 MGP_BALBcJ_G0016882.1 mouse_genomes_project 1 191150565 191165849 - Dtl protein_coding retained_intron MGP_BALBcJ_T0024183.1 MGP_BALBcJ_G0016882.1 mouse_genomes_project 1 191160998 191165851 - Dtl protein_coding retained_intron MGP_BALBcJ_T0020784.1 MGP_BALBcJ_G0016145.1 mouse_genomes_project 1 77810763 77816194 + MGP_BALBcJ_P0020784 Mrpl44 protein_coding protein_coding MGP_BALBcJ_T0020785.1 MGP_BALBcJ_G0016145.1 mouse_genomes_project 1 77810861 77813297 + Mrpl44 protein_coding retained_intron MGP_BALBcJ_T0012095.1 MGP_BALBcJ_G0010192.1 mouse_genomes_project 1 81123622 81125048 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000615.1 MGP_BALBcJ_G0000553.1 mouse_genomes_project 1 129236159 129249742 + TEC TEC MGP_BALBcJ_T0000544.1 MGP_BALBcJ_G0000482.1 mouse_genomes_project 1 84981521 84984305 + TEC TEC MGP_BALBcJ_T0100353.1 MGP_BALBcJ_G0038389.1 mouse_genomes_project 1 64833499 64833629 + Gm25832 snoRNA snoRNA MGP_BALBcJ_T0012347.1 MGP_BALBcJ_G0010444.1 mouse_genomes_project 1 192349948 192350402 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005626.1 MGP_BALBcJ_G0004736.1 mouse_genomes_project 1 9693427 9694280 - Gm29663 lincRNA lincRNA MGP_BALBcJ_T0012267.1 MGP_BALBcJ_G0010364.1 mouse_genomes_project 1 154024363 154024574 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005732.1 MGP_BALBcJ_G0004815.1 mouse_genomes_project 1 61255687 61261955 - Gm11608 lincRNA lincRNA MGP_BALBcJ_T0005733.1 MGP_BALBcJ_G0004815.1 mouse_genomes_project 1 61255687 61261960 - Gm11608 lincRNA lincRNA MGP_BALBcJ_T0019507.1 MGP_BALBcJ_G0015912.1 mouse_genomes_project 1 40068553 40076208 + MGP_BALBcJ_P0019507 Pou3f3 protein_coding protein_coding MGP_BALBcJ_T0020270.1 MGP_BALBcJ_G0016053.1 mouse_genomes_project 1 64684628 64784370 - MGP_BALBcJ_P0020270 Kansl1l protein_coding protein_coding MGP_BALBcJ_T0020271.1 MGP_BALBcJ_G0016053.1 mouse_genomes_project 1 64686041 64769000 - MGP_BALBcJ_P0020271 Kansl1l protein_coding protein_coding MGP_BALBcJ_T0020272.1 MGP_BALBcJ_G0016053.1 mouse_genomes_project 1 64700789 64784386 - MGP_BALBcJ_P0020272 Kansl1l protein_coding protein_coding MGP_BALBcJ_T0020273.1 MGP_BALBcJ_G0016053.1 mouse_genomes_project 1 64743858 64775655 - Kansl1l protein_coding processed_transcript MGP_BALBcJ_T0020274.1 MGP_BALBcJ_G0016053.1 mouse_genomes_project 1 64767602 64784370 - Kansl1l protein_coding retained_intron MGP_BALBcJ_T0098797.1 MGP_BALBcJ_G0036850.1 mouse_genomes_project 1 130175146 130177548 - Gm29488 sense_intronic sense_intronic MGP_BALBcJ_T0023114.1 MGP_BALBcJ_G0016633.1 mouse_genomes_project 1 164295934 164327038 + MGP_BALBcJ_P0023114 Gpr161 protein_coding protein_coding MGP_BALBcJ_T0023115.1 MGP_BALBcJ_G0016633.1 mouse_genomes_project 1 164307390 164332236 + MGP_BALBcJ_P0023115 Gpr161 protein_coding protein_coding MGP_BALBcJ_T0005889.1 MGP_BALBcJ_G0004942.1 mouse_genomes_project 1 135457146 135459582 - 4933409D19Rik lincRNA lincRNA MGP_BALBcJ_T0002846.1 MGP_BALBcJ_G0002691.1 mouse_genomes_project 1 103817662 103823684 + Gm17634 antisense antisense MGP_BALBcJ_T0002847.1 MGP_BALBcJ_G0002691.1 mouse_genomes_project 1 103818416 103823886 + Gm17634 antisense antisense MGP_BALBcJ_T0002848.1 MGP_BALBcJ_G0002691.1 mouse_genomes_project 1 103818802 103819166 + Gm17634 antisense antisense MGP_BALBcJ_T0021834.1 MGP_BALBcJ_G0016373.1 mouse_genomes_project 1 127075266 127141126 - MGP_BALBcJ_P0021834 Dars protein_coding protein_coding MGP_BALBcJ_T0021835.1 MGP_BALBcJ_G0016373.1 mouse_genomes_project 1 127088331 127096303 - Dars protein_coding retained_intron MGP_BALBcJ_T0021836.1 MGP_BALBcJ_G0016373.1 mouse_genomes_project 1 127135709 127141135 - MGP_BALBcJ_P0021836 Dars protein_coding protein_coding MGP_BALBcJ_T0022784.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155773912 155911604 - MGP_BALBcJ_P0022784 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022785.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155776492 155911545 - MGP_BALBcJ_P0022785 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022786.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155776492 155911601 - MGP_BALBcJ_P0022786 Ralgps2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022787.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155777435 155911389 - MGP_BALBcJ_P0022787 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022788.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155777841 155911533 - MGP_BALBcJ_P0022788 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022789.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155777847 155911610 - MGP_BALBcJ_P0022789 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022790.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155778555 155783144 - Ralgps2 protein_coding retained_intron MGP_BALBcJ_T0022791.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155782656 155911628 - MGP_BALBcJ_P0022791 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022792.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155786080 155911569 - MGP_BALBcJ_P0022792 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022793.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155788432 155911595 - MGP_BALBcJ_P0022793 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022794.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155788451 155910820 - MGP_BALBcJ_P0022794 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022795.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155798033 155800385 - Ralgps2 protein_coding retained_intron MGP_BALBcJ_T0022796.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155798087 155802229 - Ralgps2 protein_coding retained_intron MGP_BALBcJ_T0022799.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155859015 155911136 - MGP_BALBcJ_P0022799 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0022800.1 MGP_BALBcJ_G0016570.1 mouse_genomes_project 1 155872855 155910783 - MGP_BALBcJ_P0022800 Ralgps2 protein_coding protein_coding MGP_BALBcJ_T0000387.1 MGP_BALBcJ_G0000328.1 mouse_genomes_project 1 13987073 13987900 + TEC TEC MGP_BALBcJ_T0099104.1 MGP_BALBcJ_G0037140.1 mouse_genomes_project 1 75926979 75927143 - Gm26263 snRNA snRNA MGP_BALBcJ_T0020698.1 MGP_BALBcJ_G0016129.1 mouse_genomes_project 1 73466214 73472369 + MGP_BALBcJ_P0020698 Tmem198 protein_coding protein_coding MGP_BALBcJ_T0020699.1 MGP_BALBcJ_G0016129.1 mouse_genomes_project 1 73466258 73469289 + MGP_BALBcJ_P0020699 Tmem198 protein_coding protein_coding MGP_BALBcJ_T0020700.1 MGP_BALBcJ_G0016129.1 mouse_genomes_project 1 73466262 73472381 + MGP_BALBcJ_P0020700 Tmem198 protein_coding protein_coding MGP_BALBcJ_T0020701.1 MGP_BALBcJ_G0016129.1 mouse_genomes_project 1 73466386 73469352 + MGP_BALBcJ_P0020701 Tmem198 protein_coding protein_coding MGP_BALBcJ_T0101597.1 MGP_BALBcJ_G0039621.1 mouse_genomes_project 1 182735342 182736209 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0000712.1 MGP_BALBcJ_G0000648.1 mouse_genomes_project 1 160011866 160013036 + TEC TEC MGP_BALBcJ_T0019892.1 MGP_BALBcJ_G0015987.1 mouse_genomes_project 1 56252399 56267077 + MGP_BALBcJ_P0019892 Bzw1 protein_coding protein_coding MGP_BALBcJ_T0019893.1 MGP_BALBcJ_G0015987.1 mouse_genomes_project 1 56252625 56262506 + MGP_BALBcJ_P0019893 Bzw1 protein_coding protein_coding MGP_BALBcJ_T0019894.1 MGP_BALBcJ_G0015987.1 mouse_genomes_project 1 56252633 56264989 + MGP_BALBcJ_P0019894 Bzw1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019895.1 MGP_BALBcJ_G0015987.1 mouse_genomes_project 1 56252971 56264633 + MGP_BALBcJ_P0019895 Bzw1 protein_coding protein_coding MGP_BALBcJ_T0022085.1 MGP_BALBcJ_G0016430.1 mouse_genomes_project 1 132171981 132182897 - MGP_BALBcJ_P0022085 Sox13 protein_coding protein_coding MGP_BALBcJ_T0022086.1 MGP_BALBcJ_G0016430.1 mouse_genomes_project 1 132171981 132214096 - MGP_BALBcJ_P0022086 Sox13 protein_coding protein_coding MGP_BALBcJ_T0022087.1 MGP_BALBcJ_G0016430.1 mouse_genomes_project 1 132173329 132182949 - MGP_BALBcJ_P0022087 Sox13 protein_coding protein_coding MGP_BALBcJ_T0022088.1 MGP_BALBcJ_G0016430.1 mouse_genomes_project 1 132173656 132175205 - Sox13 protein_coding retained_intron MGP_BALBcJ_T0022089.1 MGP_BALBcJ_G0016430.1 mouse_genomes_project 1 132174215 132176113 - Sox13 protein_coding retained_intron MGP_BALBcJ_T0012147.1 MGP_BALBcJ_G0010244.1 mouse_genomes_project 1 104547953 104548901 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000663.1 MGP_BALBcJ_G0000599.1 mouse_genomes_project 1 145977391 145979290 + TEC TEC MGP_BALBcJ_T0000496.1 MGP_BALBcJ_G0000434.1 mouse_genomes_project 1 64766519 64767658 - TEC TEC MGP_BALBcJ_T0000423.1 MGP_BALBcJ_G0000362.1 mouse_genomes_project 1 29787048 29790452 + TEC TEC MGP_BALBcJ_T0005831.1 MGP_BALBcJ_G0004894.1 mouse_genomes_project 1 100327786 100329920 - Gm28187 lincRNA lincRNA MGP_BALBcJ_T0099148.1 MGP_BALBcJ_G0037184.1 mouse_genomes_project 1 170848016 170848123 - Gm22950 snRNA snRNA MGP_BALBcJ_T0019997.1 MGP_BALBcJ_G0016003.1 mouse_genomes_project 1 57194153 57286915 + MGP_BALBcJ_P0019997 Cdk15 protein_coding protein_coding MGP_BALBcJ_T0019998.1 MGP_BALBcJ_G0016003.1 mouse_genomes_project 1 57194154 57286333 + MGP_BALBcJ_P0019998 Cdk15 protein_coding protein_coding MGP_BALBcJ_T0019999.1 MGP_BALBcJ_G0016003.1 mouse_genomes_project 1 57194375 57195139 + Cdk15 protein_coding processed_transcript MGP_BALBcJ_T0020000.1 MGP_BALBcJ_G0016003.1 mouse_genomes_project 1 57237171 57286412 + Cdk15 protein_coding processed_transcript MGP_BALBcJ_T0012323.1 MGP_BALBcJ_G0010420.1 mouse_genomes_project 1 180386230 180386679 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021661.1 MGP_BALBcJ_G0016338.1 mouse_genomes_project 1 118105665 118140071 - MGP_BALBcJ_P0021661 Ralb protein_coding protein_coding MGP_BALBcJ_T0021662.1 MGP_BALBcJ_G0016338.1 mouse_genomes_project 1 118107505 118113422 - MGP_BALBcJ_P0021662 Ralb protein_coding protein_coding MGP_BALBcJ_T0021663.1 MGP_BALBcJ_G0016338.1 mouse_genomes_project 1 118116475 118140071 - Ralb protein_coding retained_intron MGP_BALBcJ_T0024223.1 MGP_BALBcJ_G0016890.1 mouse_genomes_project 1 191723909 192039150 + MGP_BALBcJ_P0024223 Kcnh1 protein_coding protein_coding MGP_BALBcJ_T0024224.1 MGP_BALBcJ_G0016890.1 mouse_genomes_project 1 191723909 192039150 + MGP_BALBcJ_P0024224 Kcnh1 protein_coding protein_coding MGP_BALBcJ_T0024225.1 MGP_BALBcJ_G0016890.1 mouse_genomes_project 1 191965652 192039150 + MGP_BALBcJ_P0024225 Kcnh1 protein_coding protein_coding MGP_BALBcJ_T0002969.1 MGP_BALBcJ_G0002787.1 mouse_genomes_project 1 189730882 189785895 + Prox1os antisense antisense MGP_BALBcJ_T0002880.1 MGP_BALBcJ_G0002714.1 mouse_genomes_project 1 134404996 134420168 + Gm4793 antisense antisense MGP_BALBcJ_T0000569.1 MGP_BALBcJ_G0000507.1 mouse_genomes_project 1 102153346 102156229 + TEC TEC MGP_BALBcJ_T0000542.1 MGP_BALBcJ_G0000480.1 mouse_genomes_project 1 84948472 84951424 + TEC TEC MGP_BALBcJ_T0020189.1 MGP_BALBcJ_G0016037.1 mouse_genomes_project 1 62778906 62950423 - MGP_BALBcJ_P0020189 Plekhm3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020190.1 MGP_BALBcJ_G0016037.1 mouse_genomes_project 1 62782044 62950423 - MGP_BALBcJ_P0020190 Plekhm3 protein_coding protein_coding MGP_BALBcJ_T0020191.1 MGP_BALBcJ_G0016037.1 mouse_genomes_project 1 62786732 62828254 - Plekhm3 protein_coding processed_transcript MGP_BALBcJ_T0020192.1 MGP_BALBcJ_G0016037.1 mouse_genomes_project 1 62851926 62922034 - Plekhm3 protein_coding retained_intron MGP_BALBcJ_T0020193.1 MGP_BALBcJ_G0016037.1 mouse_genomes_project 1 62931931 62950374 - MGP_BALBcJ_P0020193 Plekhm3 protein_coding protein_coding MGP_BALBcJ_T0020194.1 MGP_BALBcJ_G0016037.1 mouse_genomes_project 1 62946761 62950326 - Plekhm3 protein_coding processed_transcript MGP_BALBcJ_T0012102.1 MGP_BALBcJ_G0010199.1 mouse_genomes_project 1 84446945 84447272 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005785.1 MGP_BALBcJ_G0004853.1 mouse_genomes_project 1 80920531 80921065 + Gm28942 lincRNA lincRNA MGP_BALBcJ_T0021795.1 MGP_BALBcJ_G0016367.1 mouse_genomes_project 1 126586023 126649314 + MGP_BALBcJ_P0021795 Rab3gap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0021796.1 MGP_BALBcJ_G0016367.1 mouse_genomes_project 1 126586063 126649306 + MGP_BALBcJ_P0021796 Rab3gap1 protein_coding protein_coding MGP_BALBcJ_T0021797.1 MGP_BALBcJ_G0016367.1 mouse_genomes_project 1 126586092 126609305 + Rab3gap1 protein_coding retained_intron MGP_BALBcJ_T0021798.1 MGP_BALBcJ_G0016367.1 mouse_genomes_project 1 126606194 126611208 + Rab3gap1 protein_coding retained_intron MGP_BALBcJ_T0021799.1 MGP_BALBcJ_G0016367.1 mouse_genomes_project 1 126628699 126631895 + Rab3gap1 protein_coding retained_intron MGP_BALBcJ_T0021800.1 MGP_BALBcJ_G0016367.1 mouse_genomes_project 1 126643653 126648350 + Rab3gap1 protein_coding processed_transcript MGP_BALBcJ_T0011829.1 MGP_BALBcJ_G0009926.1 mouse_genomes_project 1 1297848 1302134 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012109.1 MGP_BALBcJ_G0010206.1 mouse_genomes_project 1 87062082 87062541 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023221.1 MGP_BALBcJ_G0016653.1 mouse_genomes_project 1 166297135 166325901 + MGP_BALBcJ_P0023221 Tmco1 protein_coding protein_coding MGP_BALBcJ_T0023222.1 MGP_BALBcJ_G0016653.1 mouse_genomes_project 1 166297427 166325901 + MGP_BALBcJ_P0023222 Tmco1 protein_coding protein_coding MGP_BALBcJ_T0023223.1 MGP_BALBcJ_G0016653.1 mouse_genomes_project 1 166297493 166329080 + MGP_BALBcJ_P0023223 Tmco1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023224.1 MGP_BALBcJ_G0016653.1 mouse_genomes_project 1 166307625 166325716 + MGP_BALBcJ_P0023224 Tmco1 protein_coding protein_coding MGP_BALBcJ_T0021298.1 MGP_BALBcJ_G0016255.1 mouse_genomes_project 1 90901585 90910066 - MGP_BALBcJ_P0021298 Olfr1414 protein_coding protein_coding MGP_BALBcJ_T0021299.1 MGP_BALBcJ_G0016255.1 mouse_genomes_project 1 90902000 90910066 - MGP_BALBcJ_P0021299 Olfr1414 protein_coding protein_coding MGP_BALBcJ_T0021300.1 MGP_BALBcJ_G0016255.1 mouse_genomes_project 1 90902000 90909970 - MGP_BALBcJ_P0021300 Olfr1414 protein_coding protein_coding MGP_BALBcJ_T0002826.1 MGP_BALBcJ_G0002673.1 mouse_genomes_project 1 84397338 84425105 - Gm16341 antisense antisense MGP_BALBcJ_T0012049.1 MGP_BALBcJ_G0010146.1 mouse_genomes_project 1 61013784 61014152 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022545.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150455869 150473062 - MGP_BALBcJ_P0022545 Rnf2 protein_coding protein_coding MGP_BALBcJ_T0022546.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150466612 150498086 - MGP_BALBcJ_P0022546 Rnf2 protein_coding protein_coding MGP_BALBcJ_T0022547.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150466613 150498230 - MGP_BALBcJ_P0022547 Rnf2 protein_coding protein_coding MGP_BALBcJ_T0022548.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150468329 150498108 - MGP_BALBcJ_P0022548 Rnf2 protein_coding protein_coding MGP_BALBcJ_T0022549.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150468361 150469239 - Rnf2 protein_coding retained_intron MGP_BALBcJ_T0022550.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150468526 150471019 - Rnf2 protein_coding processed_transcript MGP_BALBcJ_T0022551.1 MGP_BALBcJ_G0016524.1 mouse_genomes_project 1 150473800 150498069 - MGP_BALBcJ_P0022551 Rnf2 protein_coding protein_coding MGP_BALBcJ_T0098801.1 MGP_BALBcJ_G0036854.1 mouse_genomes_project 1 142650836 142654502 + Gm29170 sense_intronic sense_intronic MGP_BALBcJ_T0012126.1 MGP_BALBcJ_G0010223.1 mouse_genomes_project 1 96708981 96709269 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021012.1 MGP_BALBcJ_G0016195.1 mouse_genomes_project 1 85295052 85303922 - MGP_BALBcJ_P0021012 Ecel1 protein_coding protein_coding MGP_BALBcJ_T0021013.1 MGP_BALBcJ_G0016195.1 mouse_genomes_project 1 85295055 85302428 - MGP_BALBcJ_P0021013 Ecel1 protein_coding protein_coding MGP_BALBcJ_T0021014.1 MGP_BALBcJ_G0016195.1 mouse_genomes_project 1 85295059 85303566 - MGP_BALBcJ_P0021014 Ecel1 protein_coding protein_coding MGP_BALBcJ_T0021015.1 MGP_BALBcJ_G0016195.1 mouse_genomes_project 1 85295279 85296314 - Ecel1 protein_coding retained_intron MGP_BALBcJ_T0021016.1 MGP_BALBcJ_G0016195.1 mouse_genomes_project 1 85302423 85302712 - Ecel1 protein_coding processed_transcript MGP_BALBcJ_T0005998.1 MGP_BALBcJ_G0005027.1 mouse_genomes_project 1 183856981 183888500 + Gm37223 lincRNA lincRNA MGP_BALBcJ_T0005999.1 MGP_BALBcJ_G0005027.1 mouse_genomes_project 1 183856981 183888468 + Gm37223 lincRNA lincRNA MGP_BALBcJ_T0006000.1 MGP_BALBcJ_G0005027.1 mouse_genomes_project 1 183856981 183888497 + Gm37223 lincRNA lincRNA MGP_BALBcJ_T0006001.1 MGP_BALBcJ_G0005027.1 mouse_genomes_project 1 183856985 183892922 + Gm37223 lincRNA lincRNA MGP_BALBcJ_T0006002.1 MGP_BALBcJ_G0005027.1 mouse_genomes_project 1 183856996 183892950 + Gm37223 lincRNA lincRNA MGP_BALBcJ_T0006004.1 MGP_BALBcJ_G0005027.1 mouse_genomes_project 1 183880622 183892922 + Gm37223 lincRNA lincRNA MGP_BALBcJ_T0021148.1 MGP_BALBcJ_G0016224.1 mouse_genomes_project 1 86833833 86844066 - MGP_BALBcJ_P0021148 Glrp1 protein_coding protein_coding MGP_BALBcJ_T0018762.1 MGP_BALBcJ_G0015763.1 mouse_genomes_project 1 6648151 6674102 + MGP_BALBcJ_P0018762 3110035E14Rik protein_coding protein_coding MGP_BALBcJ_T0011934.1 MGP_BALBcJ_G0010031.1 mouse_genomes_project 1 28984393 28985226 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002963.1 MGP_BALBcJ_G0002782.1 mouse_genomes_project 1 187562032 187564448 - 9330162B11Rik antisense antisense MGP_BALBcJ_T0012145.1 MGP_BALBcJ_G0010242.1 mouse_genomes_project 1 104067216 104067833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012309.1 MGP_BALBcJ_G0010406.1 mouse_genomes_project 1 170844641 170845193 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022589.1 MGP_BALBcJ_G0016534.1 mouse_genomes_project 1 151838078 151904315 - MGP_BALBcJ_P0022589 Smg7 protein_coding protein_coding MGP_BALBcJ_T0022590.1 MGP_BALBcJ_G0016534.1 mouse_genomes_project 1 151838079 151879836 - MGP_BALBcJ_P0022590 Smg7 protein_coding protein_coding MGP_BALBcJ_T0022591.1 MGP_BALBcJ_G0016534.1 mouse_genomes_project 1 151840476 151904339 - MGP_BALBcJ_P0022591 Smg7 protein_coding protein_coding MGP_BALBcJ_T0022592.1 MGP_BALBcJ_G0016534.1 mouse_genomes_project 1 151846868 151872824 - Smg7 protein_coding processed_transcript MGP_BALBcJ_T0022593.1 MGP_BALBcJ_G0016534.1 mouse_genomes_project 1 151846890 151850620 - Smg7 protein_coding processed_transcript MGP_BALBcJ_T0022594.1 MGP_BALBcJ_G0016534.1 mouse_genomes_project 1 151847540 151850535 - Smg7 protein_coding retained_intron MGP_BALBcJ_T0011946.1 MGP_BALBcJ_G0010043.1 mouse_genomes_project 1 31882033 31882456 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022159.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133198861 133201255 + Cyb5r1 protein_coding processed_transcript MGP_BALBcJ_T0022160.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199045 133205005 + MGP_BALBcJ_P0022160 Cyb5r1 protein_coding protein_coding MGP_BALBcJ_T0022161.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199045 133205001 + MGP_BALBcJ_P0022161 Cyb5r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022162.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199259 133200867 + Cyb5r1 protein_coding processed_transcript MGP_BALBcJ_T0022163.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199267 133200859 + Cyb5r1 protein_coding processed_transcript MGP_BALBcJ_T0022164.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199268 133202930 + MGP_BALBcJ_P0022164 Cyb5r1 protein_coding protein_coding MGP_BALBcJ_T0022165.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199284 133202131 + Cyb5r1 protein_coding retained_intron MGP_BALBcJ_T0022166.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199292 133203264 + Cyb5r1 protein_coding retained_intron MGP_BALBcJ_T0022167.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199577 133204234 + MGP_BALBcJ_P0022167 Cyb5r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022168.1 MGP_BALBcJ_G0016449.1 mouse_genomes_project 1 133199577 133200932 + MGP_BALBcJ_P0022168 Cyb5r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024262.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192721944 192747819 - MGP_BALBcJ_P0024262 Traf3ip3 protein_coding protein_coding MGP_BALBcJ_T0024263.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192721985 192748032 - MGP_BALBcJ_P0024263 Traf3ip3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024264.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192721995 192748032 - MGP_BALBcJ_P0024264 Traf3ip3 protein_coding protein_coding MGP_BALBcJ_T0024265.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192725715 192731301 - MGP_BALBcJ_P0024265 Traf3ip3 protein_coding protein_coding MGP_BALBcJ_T0024266.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192725719 192744302 - Traf3ip3 protein_coding retained_intron MGP_BALBcJ_T0024267.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192731056 192740799 - MGP_BALBcJ_P0024267 Traf3ip3 protein_coding protein_coding MGP_BALBcJ_T0024268.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192731145 192733629 - MGP_BALBcJ_P0024268 Traf3ip3 protein_coding protein_coding MGP_BALBcJ_T0024269.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192731672 192747940 - Traf3ip3 protein_coding retained_intron MGP_BALBcJ_T0024270.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192740864 192748001 - Traf3ip3 protein_coding retained_intron MGP_BALBcJ_T0024271.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192741019 192744451 - MGP_BALBcJ_P0024271 Traf3ip3 protein_coding protein_coding MGP_BALBcJ_T0024272.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192744507 192747983 - Traf3ip3 protein_coding processed_transcript MGP_BALBcJ_T0024273.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192744514 192747987 - Traf3ip3 protein_coding processed_transcript MGP_BALBcJ_T0024274.1 MGP_BALBcJ_G0016897.1 mouse_genomes_project 1 192747380 192748188 - Traf3ip3 protein_coding processed_transcript MGP_BALBcJ_T0011226.1 MGP_BALBcJ_G0009351.1 mouse_genomes_project 1 67918125 67918400 - Gm22665 misc_RNA misc_RNA MGP_BALBcJ_T0000371.1 MGP_BALBcJ_G0000312.1 mouse_genomes_project 1 10096550 10097101 - TEC TEC MGP_BALBcJ_T0012048.1 MGP_BALBcJ_G0010145.1 mouse_genomes_project 1 60633012 60633951 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002985.1 MGP_BALBcJ_G0002796.1 mouse_genomes_project 1 192733762 192738875 + Gm15872 antisense antisense MGP_BALBcJ_T0012201.1 MGP_BALBcJ_G0010298.1 mouse_genomes_project 1 122505755 122506640 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021871.1 MGP_BALBcJ_G0016382.1 mouse_genomes_project 1 129483307 129490671 + MGP_BALBcJ_P0021871 Yod1 protein_coding protein_coding MGP_BALBcJ_T0005890.1 MGP_BALBcJ_G0004943.1 mouse_genomes_project 1 135476290 135478843 - Platr23 lincRNA lincRNA MGP_BALBcJ_T0011892.1 MGP_BALBcJ_G0009989.1 mouse_genomes_project 1 16104782 16104894 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000433.1 MGP_BALBcJ_G0000371.1 mouse_genomes_project 1 31274463 31276095 + TEC TEC MGP_BALBcJ_T0009522.1 MGP_BALBcJ_G0007647.1 mouse_genomes_project 1 161710855 161710918 - Gm27616 miRNA miRNA MGP_BALBcJ_T0019207.1 MGP_BALBcJ_G0015855.1 mouse_genomes_project 1 33346417 33384704 + MGP_BALBcJ_P0019207 Hs6st1 protein_coding protein_coding MGP_BALBcJ_T0019208.1 MGP_BALBcJ_G0015855.1 mouse_genomes_project 1 33379947 33383238 + Hs6st1 protein_coding retained_intron MGP_BALBcJ_T0000532.1 MGP_BALBcJ_G0000470.1 mouse_genomes_project 1 81456026 81457315 - TEC TEC MGP_BALBcJ_T0012104.1 MGP_BALBcJ_G0010201.1 mouse_genomes_project 1 84606663 84607011 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005925.1 MGP_BALBcJ_G0004969.1 mouse_genomes_project 1 154004268 154049356 - Gm29282 lincRNA lincRNA MGP_BALBcJ_T0019545.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41318695 41334725 + Tpp2 protein_coding processed_transcript MGP_BALBcJ_T0019546.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41319055 41388118 + MGP_BALBcJ_P0019546 Tpp2 protein_coding protein_coding MGP_BALBcJ_T0019547.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41319062 41342321 + Tpp2 protein_coding retained_intron MGP_BALBcJ_T0019548.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41319063 41342321 + Tpp2 protein_coding retained_intron MGP_BALBcJ_T0019549.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41319063 41388147 + MGP_BALBcJ_P0019549 Tpp2 protein_coding protein_coding MGP_BALBcJ_T0019550.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41319081 41375896 + MGP_BALBcJ_P0019550 Tpp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019551.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41319093 41375877 + MGP_BALBcJ_P0019551 Tpp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019552.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41356683 41362652 + MGP_BALBcJ_P0019552 Tpp2 protein_coding protein_coding MGP_BALBcJ_T0019553.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41368584 41388147 + MGP_BALBcJ_P0019553 Tpp2 protein_coding protein_coding MGP_BALBcJ_T0019554.1 MGP_BALBcJ_G0015921.1 mouse_genomes_project 1 41385786 41387483 + Tpp2 protein_coding retained_intron MGP_BALBcJ_T0006031.1 MGP_BALBcJ_G0005051.1 mouse_genomes_project 1 191023157 191052193 - Gm32200 lincRNA lincRNA MGP_BALBcJ_T0000353.1 MGP_BALBcJ_G0000294.1 mouse_genomes_project 1 1983678 1985793 - TEC TEC MGP_BALBcJ_T0098424.1 MGP_BALBcJ_G0036478.1 mouse_genomes_project 1 80652339 80652437 + n-R5s213 rRNA rRNA MGP_BALBcJ_T0019006.1 MGP_BALBcJ_G0015811.1 mouse_genomes_project 1 18053112 18057019 + Efhc1 protein_coding processed_transcript MGP_BALBcJ_T0019007.1 MGP_BALBcJ_G0015811.1 mouse_genomes_project 1 18053174 18092529 + MGP_BALBcJ_P0019007 Efhc1 protein_coding protein_coding MGP_BALBcJ_T0002834.1 MGP_BALBcJ_G0002681.1 mouse_genomes_project 1 90952833 90953209 - 1700054K02Rik antisense antisense MGP_BALBcJ_T0012088.1 MGP_BALBcJ_G0010185.1 mouse_genomes_project 1 78416839 78418921 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102052.1 MGP_BALBcJ_G0039869.1 mouse_genomes_project 1 43388654 43391331 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0024045.1 MGP_BALBcJ_G0016855.1 mouse_genomes_project 1 185629863 185655658 - MGP_BALBcJ_P0024045 Lyplal1 protein_coding protein_coding MGP_BALBcJ_T0024046.1 MGP_BALBcJ_G0016855.1 mouse_genomes_project 1 185630665 185655636 - Lyplal1 protein_coding processed_transcript MGP_BALBcJ_T0020908.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83764141 83818922 + MGP_BALBcJ_P0020908 protein_coding protein_coding MGP_BALBcJ_T0020909.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83764161 83813729 + MGP_BALBcJ_P0020909 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020910.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83764167 83826547 + MGP_BALBcJ_P0020910 protein_coding protein_coding MGP_BALBcJ_T0020911.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83764167 83800878 + MGP_BALBcJ_P0020911 protein_coding protein_coding MGP_BALBcJ_T0020912.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83764203 83827327 + MGP_BALBcJ_P0020912 protein_coding protein_coding MGP_BALBcJ_T0020913.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83785871 83800476 + protein_coding processed_transcript MGP_BALBcJ_T0020914.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83787763 83797086 + protein_coding retained_intron MGP_BALBcJ_T0020915.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83811299 83817032 + protein_coding retained_intron MGP_BALBcJ_T0020916.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83811657 83826755 + MGP_BALBcJ_P0020916 protein_coding protein_coding MGP_BALBcJ_T0020917.1 MGP_BALBcJ_G0016171.1 mouse_genomes_project 1 83820790 83825344 + MGP_BALBcJ_P0020917 protein_coding protein_coding MGP_BALBcJ_T0011838.1 MGP_BALBcJ_G0009935.1 mouse_genomes_project 1 2107367 2108955 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021605.1 MGP_BALBcJ_G0016328.1 mouse_genomes_project 1 114164482 115091795 + MGP_BALBcJ_P0021605 Cntnap5a protein_coding protein_coding MGP_BALBcJ_T0021606.1 MGP_BALBcJ_G0016328.1 mouse_genomes_project 1 114164863 115085187 + MGP_BALBcJ_P0021606 Cntnap5a protein_coding unknown_likely_coding MGP_BALBcJ_T0016982.1 MGP_BALBcJ_G0015047.1 mouse_genomes_project 1 131242597 131255171 - 6030442K20Rik processed_transcript antisense MGP_BALBcJ_T0016983.1 MGP_BALBcJ_G0015047.1 mouse_genomes_project 1 131254184 131255190 - 6030442K20Rik processed_transcript retained_intron MGP_BALBcJ_T0023315.1 MGP_BALBcJ_G0016681.1 mouse_genomes_project 1 170070326 170077207 - Fcgr3 protein_coding retained_intron MGP_BALBcJ_T0023316.1 MGP_BALBcJ_G0016681.1 mouse_genomes_project 1 170070327 170078884 - MGP_BALBcJ_P0023316 Fcgr3 protein_coding protein_coding MGP_BALBcJ_T0023317.1 MGP_BALBcJ_G0016681.1 mouse_genomes_project 1 170070353 170078884 - MGP_BALBcJ_P0023317 Fcgr3 protein_coding protein_coding MGP_BALBcJ_T0011947.1 MGP_BALBcJ_G0010044.1 mouse_genomes_project 1 31885308 31885543 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012090.1 MGP_BALBcJ_G0010187.1 mouse_genomes_project 1 79593113 79596838 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020299.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67534178 67681934 - MGP_BALBcJ_P0020299 Ikzf2 protein_coding protein_coding MGP_BALBcJ_T0020300.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67534723 67683359 - MGP_BALBcJ_P0020300 Ikzf2 protein_coding protein_coding MGP_BALBcJ_T0020301.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67534909 67683399 - MGP_BALBcJ_P0020301 Ikzf2 protein_coding unknown_likely_coding MGP_BALBcJ_T0020302.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67534909 67680205 - MGP_BALBcJ_P0020302 Ikzf2 protein_coding protein_coding MGP_BALBcJ_T0020303.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67534909 67680205 - MGP_BALBcJ_P0020303 Ikzf2 protein_coding protein_coding MGP_BALBcJ_T0020304.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67534909 67680205 - MGP_BALBcJ_P0020304 Ikzf2 protein_coding protein_coding MGP_BALBcJ_T0020305.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67573826 67681348 - MGP_BALBcJ_P0020305 Ikzf2 protein_coding protein_coding MGP_BALBcJ_T0020306.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67677605 67680584 - Ikzf2 protein_coding retained_intron MGP_BALBcJ_T0020307.1 MGP_BALBcJ_G0016059.1 mouse_genomes_project 1 67677606 67683254 - Ikzf2 protein_coding retained_intron MGP_BALBcJ_T0017041.1 MGP_BALBcJ_G0015060.1 mouse_genomes_project 1 168930765 168932316 - Gm15852 processed_transcript processed_transcript MGP_BALBcJ_T0000507.1 MGP_BALBcJ_G0000445.1 mouse_genomes_project 1 68570571 68576408 - TEC TEC MGP_BALBcJ_T0022097.1 MGP_BALBcJ_G0016433.1 mouse_genomes_project 1 132411560 132454719 - MGP_BALBcJ_P0022097 Zbed6 protein_coding protein_coding MGP_BALBcJ_T0011976.1 MGP_BALBcJ_G0010073.1 mouse_genomes_project 1 41816054 41816363 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005772.1 MGP_BALBcJ_G0004843.1 mouse_genomes_project 1 75541709 75543559 + Gm28386 lincRNA lincRNA MGP_BALBcJ_T0012009.1 MGP_BALBcJ_G0010106.1 mouse_genomes_project 1 49531121 49531537 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012321.1 MGP_BALBcJ_G0010418.1 mouse_genomes_project 1 179045356 179045875 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019555.1 MGP_BALBcJ_G0015922.1 mouse_genomes_project 1 41394554 41405190 - MGP_BALBcJ_P0019555 Mettl21c protein_coding protein_coding MGP_BALBcJ_T0019556.1 MGP_BALBcJ_G0015922.1 mouse_genomes_project 1 41395081 41402652 - Mettl21c protein_coding processed_transcript MGP_BALBcJ_T0019557.1 MGP_BALBcJ_G0015922.1 mouse_genomes_project 1 41395656 41405218 - Mettl21c protein_coding retained_intron MGP_BALBcJ_T0000479.1 MGP_BALBcJ_G0000417.1 mouse_genomes_project 1 58550893 58552322 - TEC TEC MGP_BALBcJ_T0000691.1 MGP_BALBcJ_G0000627.1 mouse_genomes_project 1 156332340 156333523 - TEC TEC MGP_BALBcJ_T0012099.1 MGP_BALBcJ_G0010196.1 mouse_genomes_project 1 81337814 81338655 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018687.1 MGP_BALBcJ_G0015751.1 mouse_genomes_project 1 1901655 1943283 + MGP_BALBcJ_P0018687 Tcea1 protein_coding protein_coding MGP_BALBcJ_T0018688.1 MGP_BALBcJ_G0015751.1 mouse_genomes_project 1 1901879 1943287 + MGP_BALBcJ_P0018688 Tcea1 protein_coding protein_coding MGP_BALBcJ_T0009531.1 MGP_BALBcJ_G0007656.1 mouse_genomes_project 1 176178086 176178166 + Gm25993 miRNA miRNA MGP_BALBcJ_T0012180.1 MGP_BALBcJ_G0010277.1 mouse_genomes_project 1 117437987 117438306 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012114.1 MGP_BALBcJ_G0010211.1 mouse_genomes_project 1 89676182 89677074 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000509.1 MGP_BALBcJ_G0000447.1 mouse_genomes_project 1 71242960 71245479 - TEC TEC MGP_BALBcJ_T0098438.1 MGP_BALBcJ_G0036492.1 mouse_genomes_project 1 164796402 164796520 - Gm24808 rRNA rRNA MGP_BALBcJ_T0012273.1 MGP_BALBcJ_G0010370.1 mouse_genomes_project 1 156579212 156580013 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023909.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181448738 181578433 - MGP_BALBcJ_P0023909 Enah protein_coding protein_coding MGP_BALBcJ_T0023910.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181456665 181578762 - MGP_BALBcJ_P0023910 Enah protein_coding protein_coding MGP_BALBcJ_T0023911.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181456712 181578752 - MGP_BALBcJ_P0023911 Enah protein_coding protein_coding MGP_BALBcJ_T0023912.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181456712 181578752 - MGP_BALBcJ_P0023912 Enah protein_coding protein_coding MGP_BALBcJ_T0023913.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457591 181461306 - Enah protein_coding retained_intron MGP_BALBcJ_T0023914.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457745 181459740 - Enah protein_coding retained_intron MGP_BALBcJ_T0023915.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457773 181572437 - MGP_BALBcJ_P0023915 Enah protein_coding protein_coding MGP_BALBcJ_T0023916.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457780 181578433 - MGP_BALBcJ_P0023916 Enah protein_coding protein_coding MGP_BALBcJ_T0023917.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457780 181578433 - MGP_BALBcJ_P0023917 Enah protein_coding protein_coding MGP_BALBcJ_T0023918.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457780 181578433 - MGP_BALBcJ_P0023918 Enah protein_coding protein_coding MGP_BALBcJ_T0023919.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181457975 181470254 - Enah protein_coding retained_intron MGP_BALBcJ_T0023920.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181463609 181465499 - Enah protein_coding retained_intron MGP_BALBcJ_T0023921.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181472344 181476658 - MGP_BALBcJ_P0023921 Enah protein_coding protein_coding MGP_BALBcJ_T0023922.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181476092 181512642 - Enah protein_coding retained_intron MGP_BALBcJ_T0023923.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181490726 181496842 - Enah protein_coding retained_intron MGP_BALBcJ_T0023924.1 MGP_BALBcJ_G0016826.1 mouse_genomes_project 1 181512240 181578448 - Enah protein_coding retained_intron MGP_BALBcJ_T0020907.1 MGP_BALBcJ_G0016170.1 mouse_genomes_project 1 83723683 83764835 - MGP_BALBcJ_P0020907 protein_coding protein_coding MGP_BALBcJ_T0002949.1 MGP_BALBcJ_G0002770.1 mouse_genomes_project 1 180324124 180327376 + H3f3aos antisense antisense MGP_BALBcJ_T0002950.1 MGP_BALBcJ_G0002770.1 mouse_genomes_project 1 180324132 180327205 + H3f3aos antisense antisense MGP_BALBcJ_T0000662.1 MGP_BALBcJ_G0000598.1 mouse_genomes_project 1 145353037 145357746 - TEC TEC MGP_BALBcJ_T0024001.1 MGP_BALBcJ_G0016845.1 mouse_genomes_project 1 184234955 184244123 - MGP_BALBcJ_P0024001 Hlx protein_coding protein_coding MGP_BALBcJ_T0024002.1 MGP_BALBcJ_G0016845.1 mouse_genomes_project 1 184234962 184239412 - MGP_BALBcJ_P0024002 Hlx protein_coding protein_coding MGP_BALBcJ_T0005993.1 MGP_BALBcJ_G0005022.1 mouse_genomes_project 1 182544663 182544817 + Gm38079 lincRNA lincRNA MGP_BALBcJ_T0000628.1 MGP_BALBcJ_G0000565.1 mouse_genomes_project 1 132894162 132896917 - TEC TEC MGP_BALBcJ_T0022275.1 MGP_BALBcJ_G0016472.1 mouse_genomes_project 1 134642794 134657883 + MGP_BALBcJ_P0022275 Lad1 protein_coding protein_coding MGP_BALBcJ_T0022276.1 MGP_BALBcJ_G0016472.1 mouse_genomes_project 1 134654535 134657248 + Lad1 protein_coding processed_transcript MGP_BALBcJ_T0022277.1 MGP_BALBcJ_G0016472.1 mouse_genomes_project 1 134655074 134657003 + Lad1 protein_coding processed_transcript MGP_BALBcJ_T0019132.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31004402 31057218 - MGP_BALBcJ_P0019132 Zfp451 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019133.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31004402 31057360 - MGP_BALBcJ_P0019133 Zfp451 protein_coding protein_coding MGP_BALBcJ_T0019134.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31020355 31048262 - MGP_BALBcJ_P0019134 Zfp451 protein_coding protein_coding MGP_BALBcJ_T0019135.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31021921 31026803 - MGP_BALBcJ_P0019135 Zfp451 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019136.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31022054 31057259 - MGP_BALBcJ_P0019136 Zfp451 protein_coding protein_coding MGP_BALBcJ_T0019137.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31025043 31057044 - Zfp451 protein_coding processed_transcript MGP_BALBcJ_T0019138.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31029331 31043638 - Zfp451 protein_coding processed_transcript MGP_BALBcJ_T0019139.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31035005 31057403 - MGP_BALBcJ_P0019139 Zfp451 protein_coding protein_coding MGP_BALBcJ_T0019140.1 MGP_BALBcJ_G0015842.1 mouse_genomes_project 1 31056359 31057428 - Zfp451 protein_coding retained_intron MGP_BALBcJ_T0023743.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 178449038 179024494 - MGP_BALBcJ_P0023743 Smyd3 protein_coding protein_coding MGP_BALBcJ_T0023744.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 178452124 178747010 - Smyd3 protein_coding processed_transcript MGP_BALBcJ_T0023745.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 178452229 178880868 - Smyd3 protein_coding processed_transcript MGP_BALBcJ_T0023746.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 178454324 178486328 - Smyd3 protein_coding processed_transcript MGP_BALBcJ_T0023747.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 178884720 178911622 - Smyd3 protein_coding processed_transcript MGP_BALBcJ_T0023748.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 178901416 179024501 - MGP_BALBcJ_P0023748 Smyd3 protein_coding protein_coding MGP_BALBcJ_T0023749.1 MGP_BALBcJ_G0016794.1 mouse_genomes_project 1 179014646 179024465 - MGP_BALBcJ_P0023749 Smyd3 protein_coding protein_coding MGP_BALBcJ_T0021519.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 103978408 104109915 - MGP_BALBcJ_P0021519 Pign protein_coding protein_coding MGP_BALBcJ_T0021520.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 103978412 104114649 - MGP_BALBcJ_P0021520 Pign protein_coding protein_coding MGP_BALBcJ_T0021521.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 103981155 104027084 - Pign protein_coding processed_transcript MGP_BALBcJ_T0021522.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104009661 104114630 - MGP_BALBcJ_P0021522 Pign protein_coding protein_coding MGP_BALBcJ_T0021523.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104014196 104114649 - MGP_BALBcJ_P0021523 Pign protein_coding protein_coding MGP_BALBcJ_T0021524.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104097522 104114664 - Pign protein_coding retained_intron MGP_BALBcJ_T0021525.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104097522 104114663 - Pign protein_coding retained_intron MGP_BALBcJ_T0021526.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104097677 104100550 - Pign protein_coding retained_intron MGP_BALBcJ_T0021527.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104109165 104114660 - Pign protein_coding retained_intron MGP_BALBcJ_T0021528.1 MGP_BALBcJ_G0016306.1 mouse_genomes_project 1 104110094 104114659 - Pign protein_coding retained_intron MGP_BALBcJ_T0023279.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169303600 169328675 - Nos1ap protein_coding processed_transcript MGP_BALBcJ_T0023281.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169318483 169594844 - MGP_BALBcJ_P0023281 Nos1ap protein_coding protein_coding MGP_BALBcJ_T0023282.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169318523 169321805 - Nos1ap protein_coding retained_intron MGP_BALBcJ_T0023283.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169319745 169325376 - Nos1ap protein_coding processed_transcript MGP_BALBcJ_T0023284.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169328487 169594347 - MGP_BALBcJ_P0023284 Nos1ap protein_coding protein_coding MGP_BALBcJ_T0023285.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169328633 169594280 - MGP_BALBcJ_P0023285 Nos1ap protein_coding protein_coding MGP_BALBcJ_T0023286.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169339191 169456819 - Nos1ap protein_coding processed_transcript MGP_BALBcJ_T0023287.1 MGP_BALBcJ_G0016671.1 mouse_genomes_project 1 169373320 169594832 - Nos1ap protein_coding retained_intron MGP_BALBcJ_T0020070.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366403 58437313 + MGP_BALBcJ_P0020070 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020071.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366480 58437313 + MGP_BALBcJ_P0020071 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020072.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366480 58433240 + MGP_BALBcJ_P0020072 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020073.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366519 58435669 + MGP_BALBcJ_P0020073 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020074.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366566 58400917 + Abi2 protein_coding retained_intron MGP_BALBcJ_T0020075.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366580 58403441 + MGP_BALBcJ_P0020075 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020076.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366588 58433310 + MGP_BALBcJ_P0020076 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020077.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58366593 58390641 + Abi2 protein_coding retained_intron MGP_BALBcJ_T0020078.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58393228 58433910 + MGP_BALBcJ_P0020078 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020079.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58393352 58433072 + MGP_BALBcJ_P0020079 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020080.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58393357 58433235 + MGP_BALBcJ_P0020080 Abi2 protein_coding protein_coding MGP_BALBcJ_T0020081.1 MGP_BALBcJ_G0016015.1 mouse_genomes_project 1 58395088 58433456 + MGP_BALBcJ_P0020081 Abi2 protein_coding protein_coding MGP_BALBcJ_T0012163.1 MGP_BALBcJ_G0010260.1 mouse_genomes_project 1 110296305 110298831 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000557.1 MGP_BALBcJ_G0000495.1 mouse_genomes_project 1 89247599 89248436 - TEC TEC MGP_BALBcJ_T0011862.1 MGP_BALBcJ_G0009959.1 mouse_genomes_project 1 6495642 6496812 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101829.1 MGP_BALBcJ_G0039757.1 mouse_genomes_project 1 95345552 95428745 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101830.1 MGP_BALBcJ_G0039757.1 mouse_genomes_project 1 95363448 95428405 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0011864.1 MGP_BALBcJ_G0009961.1 mouse_genomes_project 1 6589580 6590675 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020932.1 MGP_BALBcJ_G0016175.1 mouse_genomes_project 1 84048797 84052069 + MGP_BALBcJ_P0020932 4933407L21Rik protein_coding protein_coding MGP_BALBcJ_T0020933.1 MGP_BALBcJ_G0016175.1 mouse_genomes_project 1 84049041 84060890 + MGP_BALBcJ_P0020933 4933407L21Rik protein_coding protein_coding MGP_BALBcJ_T0020934.1 MGP_BALBcJ_G0016175.1 mouse_genomes_project 1 84049200 84052069 + 4933407L21Rik protein_coding retained_intron MGP_BALBcJ_T0002917.1 MGP_BALBcJ_G0002743.1 mouse_genomes_project 1 162294995 162301696 + Gm20471 antisense antisense MGP_BALBcJ_T0005817.1 MGP_BALBcJ_G0004883.1 mouse_genomes_project 1 91142291 91143559 - Gm29482 lincRNA lincRNA MGP_BALBcJ_T0000489.1 MGP_BALBcJ_G0000427.1 mouse_genomes_project 1 60782843 60785399 + TEC TEC MGP_BALBcJ_T0020291.1 MGP_BALBcJ_G0016057.1 mouse_genomes_project 1 65094854 65210647 + MGP_BALBcJ_P0020291 Cps1 protein_coding protein_coding MGP_BALBcJ_T0022140.1 MGP_BALBcJ_G0016443.1 mouse_genomes_project 1 132990528 132998312 + MGP_BALBcJ_P0022140 Mybph protein_coding protein_coding MGP_BALBcJ_T0022141.1 MGP_BALBcJ_G0016443.1 mouse_genomes_project 1 132990537 132998313 + MGP_BALBcJ_P0022141 Mybph protein_coding protein_coding MGP_BALBcJ_T0099109.1 MGP_BALBcJ_G0037145.1 mouse_genomes_project 1 92221420 92221522 - Gm22089 snRNA snRNA MGP_BALBcJ_T0019115.1 MGP_BALBcJ_G0015839.1 mouse_genomes_project 1 30680892 30908858 - MGP_BALBcJ_P0019115 Prim2 protein_coding protein_coding MGP_BALBcJ_T0019116.1 MGP_BALBcJ_G0015839.1 mouse_genomes_project 1 30706458 30860737 - Prim2 protein_coding retained_intron MGP_BALBcJ_T0019117.1 MGP_BALBcJ_G0015839.1 mouse_genomes_project 1 30859473 30861933 - Prim2 protein_coding retained_intron MGP_BALBcJ_T0018906.1 MGP_BALBcJ_G0015787.1 mouse_genomes_project 1 12852786 12893778 + MGP_BALBcJ_P0018906 Terf1 protein_coding protein_coding MGP_BALBcJ_T0018907.1 MGP_BALBcJ_G0015787.1 mouse_genomes_project 1 12852797 12872268 + Terf1 protein_coding processed_transcript MGP_BALBcJ_T0018908.1 MGP_BALBcJ_G0015787.1 mouse_genomes_project 1 12852804 12893196 + MGP_BALBcJ_P0018908 Terf1 protein_coding protein_coding MGP_BALBcJ_T0018909.1 MGP_BALBcJ_G0015787.1 mouse_genomes_project 1 12854782 12872356 + Terf1 protein_coding retained_intron MGP_BALBcJ_T0000484.1 MGP_BALBcJ_G0000422.1 mouse_genomes_project 1 59626308 59629045 + TEC TEC MGP_BALBcJ_T0024278.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192766049 192787229 - MGP_BALBcJ_P0024278 Hsd11b1 protein_coding protein_coding MGP_BALBcJ_T0024279.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192766097 192786201 - MGP_BALBcJ_P0024279 Hsd11b1 protein_coding protein_coding MGP_BALBcJ_T0024280.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192766104 192810585 - MGP_BALBcJ_P0024280 Hsd11b1 protein_coding protein_coding MGP_BALBcJ_T0024281.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192768056 192788160 - MGP_BALBcJ_P0024281 Hsd11b1 protein_coding protein_coding MGP_BALBcJ_T0024282.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192774182 192785003 - MGP_BALBcJ_P0024282 Hsd11b1 protein_coding protein_coding MGP_BALBcJ_T0024283.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192781634 192783616 - Hsd11b1 protein_coding retained_intron MGP_BALBcJ_T0024284.1 MGP_BALBcJ_G0016899.1 mouse_genomes_project 1 192782862 192786027 - Hsd11b1 protein_coding processed_transcript MGP_BALBcJ_T0019767.1 MGP_BALBcJ_G0015962.1 mouse_genomes_project 1 52099157 52120789 + Ccdc150 protein_coding retained_intron MGP_BALBcJ_T0019768.1 MGP_BALBcJ_G0015962.1 mouse_genomes_project 1 52099157 52223624 + MGP_BALBcJ_P0019768 Ccdc150 protein_coding protein_coding MGP_BALBcJ_T0019769.1 MGP_BALBcJ_G0015962.1 mouse_genomes_project 1 52099196 52223367 + MGP_BALBcJ_P0019769 Ccdc150 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019770.1 MGP_BALBcJ_G0015962.1 mouse_genomes_project 1 52183331 52223505 + Ccdc150 protein_coding processed_transcript MGP_BALBcJ_T0019771.1 MGP_BALBcJ_G0015962.1 mouse_genomes_project 1 52209247 52223500 + Ccdc150 protein_coding retained_intron MGP_BALBcJ_T0011878.1 MGP_BALBcJ_G0009975.1 mouse_genomes_project 1 10816729 10817732 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019941.1 MGP_BALBcJ_G0015994.1 mouse_genomes_project 1 56538152 56574260 - MGP_BALBcJ_P0019941 Als2cr12 protein_coding protein_coding MGP_BALBcJ_T0019942.1 MGP_BALBcJ_G0015994.1 mouse_genomes_project 1 56538152 56839109 - MGP_BALBcJ_P0019942 Als2cr12 protein_coding protein_coding MGP_BALBcJ_T0019943.1 MGP_BALBcJ_G0015994.1 mouse_genomes_project 1 56551870 56568508 - Als2cr12 protein_coding retained_intron MGP_BALBcJ_T0021586.1 MGP_BALBcJ_G0016324.1 mouse_genomes_project 1 106119787 106138069 + MGP_BALBcJ_P0021586 Serpinb8 protein_coding protein_coding MGP_BALBcJ_T0021587.1 MGP_BALBcJ_G0016324.1 mouse_genomes_project 1 106119787 106139616 + MGP_BALBcJ_P0021587 Serpinb8 protein_coding protein_coding MGP_BALBcJ_T0021588.1 MGP_BALBcJ_G0016324.1 mouse_genomes_project 1 106119827 106135316 + Serpinb8 protein_coding retained_intron MGP_BALBcJ_T0021589.1 MGP_BALBcJ_G0016324.1 mouse_genomes_project 1 106135045 106136491 + MGP_BALBcJ_P0021589 Serpinb8 protein_coding protein_coding MGP_BALBcJ_T0020724.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539254 73555158 + MGP_BALBcJ_P0020724 Slc4a3 protein_coding protein_coding MGP_BALBcJ_T0020725.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539292 73540504 + Slc4a3 protein_coding retained_intron MGP_BALBcJ_T0020726.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539458 73541035 + MGP_BALBcJ_P0020726 Slc4a3 protein_coding protein_coding MGP_BALBcJ_T0020727.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539492 73551887 + MGP_BALBcJ_P0020727 Slc4a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020728.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539523 73540741 + Slc4a3 protein_coding retained_intron MGP_BALBcJ_T0020729.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539529 73541008 + MGP_BALBcJ_P0020729 Slc4a3 protein_coding protein_coding MGP_BALBcJ_T0020730.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539640 73553878 + Slc4a3 protein_coding retained_intron MGP_BALBcJ_T0020731.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73539652 73540531 + Slc4a3 protein_coding retained_intron MGP_BALBcJ_T0020732.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73542595 73544379 + MGP_BALBcJ_P0020732 Slc4a3 protein_coding protein_coding MGP_BALBcJ_T0020733.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73542764 73544126 + Slc4a3 protein_coding retained_intron MGP_BALBcJ_T0020734.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73543591 73548122 + MGP_BALBcJ_P0020734 Slc4a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020735.1 MGP_BALBcJ_G0016132.1 mouse_genomes_project 1 73544705 73546729 + MGP_BALBcJ_P0020735 Slc4a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020325.1 MGP_BALBcJ_G0016064.1 mouse_genomes_project 1 69567676 69590153 + MGP_BALBcJ_P0020325 Atic protein_coding protein_coding MGP_BALBcJ_T0020326.1 MGP_BALBcJ_G0016064.1 mouse_genomes_project 1 69567705 69573725 + Atic protein_coding retained_intron MGP_BALBcJ_T0020327.1 MGP_BALBcJ_G0016064.1 mouse_genomes_project 1 69567705 69570478 + Atic protein_coding retained_intron MGP_BALBcJ_T0020328.1 MGP_BALBcJ_G0016064.1 mouse_genomes_project 1 69567705 69583890 + Atic protein_coding retained_intron MGP_BALBcJ_T0020329.1 MGP_BALBcJ_G0016064.1 mouse_genomes_project 1 69567739 69573725 + Atic protein_coding retained_intron MGP_BALBcJ_T0020330.1 MGP_BALBcJ_G0016064.1 mouse_genomes_project 1 69579392 69583487 + Atic protein_coding retained_intron MGP_BALBcJ_T0100370.1 MGP_BALBcJ_G0038406.1 mouse_genomes_project 1 106402680 106402812 + Gm22438 snoRNA snoRNA MGP_BALBcJ_T0022699.1 MGP_BALBcJ_G0016556.1 mouse_genomes_project 1 154554622 154568791 + MGP_BALBcJ_P0022699 Acbd6 protein_coding protein_coding MGP_BALBcJ_T0022700.1 MGP_BALBcJ_G0016556.1 mouse_genomes_project 1 154554624 154687788 + MGP_BALBcJ_P0022700 Acbd6 protein_coding protein_coding MGP_BALBcJ_T0022701.1 MGP_BALBcJ_G0016556.1 mouse_genomes_project 1 154554628 154584301 + MGP_BALBcJ_P0022701 Acbd6 protein_coding protein_coding MGP_BALBcJ_T0022702.1 MGP_BALBcJ_G0016556.1 mouse_genomes_project 1 154559619 154683557 + Acbd6 protein_coding processed_transcript MGP_BALBcJ_T0022703.1 MGP_BALBcJ_G0016556.1 mouse_genomes_project 1 154563750 154568762 + Acbd6 protein_coding retained_intron MGP_BALBcJ_T0022704.1 MGP_BALBcJ_G0016556.1 mouse_genomes_project 1 154683452 154684829 + MGP_BALBcJ_P0022704 Acbd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002925.1 MGP_BALBcJ_G0002750.1 mouse_genomes_project 1 166229448 166238936 + Gm37982 antisense antisense MGP_BALBcJ_T0019537.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41133708 41214408 - MGP_BALBcJ_P0019537 Uxs1 protein_coding protein_coding MGP_BALBcJ_T0019538.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41136254 41214349 - MGP_BALBcJ_P0019538 Uxs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019539.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41151758 41214408 - MGP_BALBcJ_P0019539 Uxs1 protein_coding protein_coding MGP_BALBcJ_T0019540.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41158481 41213624 - Uxs1 protein_coding processed_transcript MGP_BALBcJ_T0019541.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41158481 41214358 - MGP_BALBcJ_P0019541 Uxs1 protein_coding protein_coding MGP_BALBcJ_T0019542.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41161617 41214370 - Uxs1 protein_coding processed_transcript MGP_BALBcJ_T0019543.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41166854 41214370 - MGP_BALBcJ_P0019543 Uxs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019544.1 MGP_BALBcJ_G0015920.1 mouse_genomes_project 1 41177353 41214382 - MGP_BALBcJ_P0019544 Uxs1 protein_coding protein_coding MGP_BALBcJ_T0100376.1 MGP_BALBcJ_G0038412.1 mouse_genomes_project 1 122070765 122070896 - Gm24791 snoRNA snoRNA MGP_BALBcJ_T0023579.1 MGP_BALBcJ_G0016740.1 mouse_genomes_project 1 172295551 172296614 - MGP_BALBcJ_P0023579 Olfr1406 protein_coding protein_coding MGP_BALBcJ_T0023580.1 MGP_BALBcJ_G0016740.1 mouse_genomes_project 1 172296278 172303644 - MGP_BALBcJ_P0023580 Olfr1406 protein_coding protein_coding MGP_BALBcJ_T0011981.1 MGP_BALBcJ_G0010078.1 mouse_genomes_project 1 42485394 42486334 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002758.1 MGP_BALBcJ_G0002623.1 mouse_genomes_project 1 34428237 34429229 - Gm37020 antisense antisense MGP_BALBcJ_T0009512.1 MGP_BALBcJ_G0007637.1 mouse_genomes_project 1 136812936 136813016 + Mir181b-1 miRNA miRNA MGP_BALBcJ_T0019844.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246176 55264985 - MGP_BALBcJ_P0019844 Tyw5 protein_coding protein_coding MGP_BALBcJ_T0019845.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246179 55264355 - Tyw5 protein_coding retained_intron MGP_BALBcJ_T0019846.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246179 55264558 - MGP_BALBcJ_P0019846 Tyw5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019847.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246344 55248712 - Tyw5 protein_coding processed_transcript MGP_BALBcJ_T0019848.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246355 55251640 - Tyw5 protein_coding retained_intron MGP_BALBcJ_T0019849.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246605 55264327 - MGP_BALBcJ_P0019849 Tyw5 protein_coding protein_coding MGP_BALBcJ_T0019850.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55246625 55249683 - Tyw5 protein_coding retained_intron MGP_BALBcJ_T0019851.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55248652 55259441 - Tyw5 protein_coding processed_transcript MGP_BALBcJ_T0019852.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55249371 55264355 - MGP_BALBcJ_P0019852 Tyw5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019853.1 MGP_BALBcJ_G0015978.1 mouse_genomes_project 1 55251126 55264421 - Tyw5 protein_coding retained_intron MGP_BALBcJ_T0012292.1 MGP_BALBcJ_G0010389.1 mouse_genomes_project 1 164649185 164649975 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011907.1 MGP_BALBcJ_G0010004.1 mouse_genomes_project 1 20117823 20119773 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022858.1 MGP_BALBcJ_G0016580.1 mouse_genomes_project 1 158552095 158965605 + MGP_BALBcJ_P0022858 Tnr protein_coding protein_coding MGP_BALBcJ_T0022859.1 MGP_BALBcJ_G0016580.1 mouse_genomes_project 1 158552167 158769074 + Tnr protein_coding retained_intron MGP_BALBcJ_T0022860.1 MGP_BALBcJ_G0016580.1 mouse_genomes_project 1 158768788 158958325 + MGP_BALBcJ_P0022860 Tnr protein_coding protein_coding MGP_BALBcJ_T0022861.1 MGP_BALBcJ_G0016580.1 mouse_genomes_project 1 158804760 158884410 + MGP_BALBcJ_P0022861 Tnr protein_coding protein_coding MGP_BALBcJ_T0022862.1 MGP_BALBcJ_G0016580.1 mouse_genomes_project 1 158884464 158898050 + MGP_BALBcJ_P0022862 Tnr protein_coding protein_coding MGP_BALBcJ_T0019701.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50221522 50243020 + MGP_BALBcJ_P0019701 Nemp2 protein_coding protein_coding MGP_BALBcJ_T0019702.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50221556 50243020 + MGP_BALBcJ_P0019702 Nemp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019703.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50221566 50241738 + MGP_BALBcJ_P0019703 Nemp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019704.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50221571 50241831 + Nemp2 protein_coding retained_intron MGP_BALBcJ_T0019705.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50221616 50241804 + MGP_BALBcJ_P0019705 Nemp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019706.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50232617 50243020 + Nemp2 protein_coding retained_intron MGP_BALBcJ_T0019707.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50233085 50241758 + Nemp2 protein_coding processed_transcript MGP_BALBcJ_T0019708.1 MGP_BALBcJ_G0015948.1 mouse_genomes_project 1 50236281 50241129 + Nemp2 protein_coding retained_intron MGP_BALBcJ_T0012144.1 MGP_BALBcJ_G0010241.1 mouse_genomes_project 1 104028961 104029222 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002888.1 MGP_BALBcJ_G0002721.1 mouse_genomes_project 1 145693116 145729717 - Gm15584 antisense antisense MGP_BALBcJ_T0022212.1 MGP_BALBcJ_G0016459.1 mouse_genomes_project 1 133939404 133950735 + MGP_BALBcJ_P0022212 Ptpn7 protein_coding protein_coding MGP_BALBcJ_T0022213.1 MGP_BALBcJ_G0016459.1 mouse_genomes_project 1 133939429 133952010 + MGP_BALBcJ_P0022213 Ptpn7 protein_coding protein_coding MGP_BALBcJ_T0022214.1 MGP_BALBcJ_G0016459.1 mouse_genomes_project 1 133940012 133946693 + Ptpn7 protein_coding retained_intron MGP_BALBcJ_T0022215.1 MGP_BALBcJ_G0016459.1 mouse_genomes_project 1 133940013 133951620 + MGP_BALBcJ_P0022215 Ptpn7 protein_coding protein_coding MGP_BALBcJ_T0012238.1 MGP_BALBcJ_G0010335.1 mouse_genomes_project 1 143081786 143083458 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000703.1 MGP_BALBcJ_G0000639.1 mouse_genomes_project 1 159620026 159621278 - TEC TEC MGP_BALBcJ_T0000454.1 MGP_BALBcJ_G0000392.1 mouse_genomes_project 1 40872290 40874781 + TEC TEC MGP_BALBcJ_T0102105.1 MGP_BALBcJ_G0039922.1 mouse_genomes_project 1 177142215 177295512 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0019276.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33850700 33972167 - MGP_BALBcJ_P0019276 Fam178b protein_coding protein_coding MGP_BALBcJ_T0019277.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33850704 33881719 - Fam178b protein_coding processed_transcript MGP_BALBcJ_T0019278.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33850704 33877701 - Fam178b protein_coding processed_transcript MGP_BALBcJ_T0019279.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33850704 33888796 - MGP_BALBcJ_P0019279 Fam178b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019280.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33852336 33889339 - MGP_BALBcJ_P0019280 Fam178b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019281.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33852875 33876071 - Fam178b protein_coding processed_transcript MGP_BALBcJ_T0019282.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33864486 33888817 - Fam178b protein_coding processed_transcript MGP_BALBcJ_T0019283.1 MGP_BALBcJ_G0015867.1 mouse_genomes_project 1 33888360 33972167 - MGP_BALBcJ_P0019283 Fam178b protein_coding protein_coding MGP_BALBcJ_T0019008.1 MGP_BALBcJ_G0015812.1 mouse_genomes_project 1 18100558 18190642 - MGP_BALBcJ_P0019008 Tram2 protein_coding protein_coding MGP_BALBcJ_T0019009.1 MGP_BALBcJ_G0015812.1 mouse_genomes_project 1 18108574 18155169 - Tram2 protein_coding processed_transcript MGP_BALBcJ_T0012183.1 MGP_BALBcJ_G0010280.1 mouse_genomes_project 1 118134759 118135152 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100378.1 MGP_BALBcJ_G0038414.1 mouse_genomes_project 1 127207637 127207771 + Gm23902 snoRNA snoRNA MGP_BALBcJ_T0000495.1 MGP_BALBcJ_G0000433.1 mouse_genomes_project 1 64742371 64746968 + TEC TEC MGP_BALBcJ_T0012083.1 MGP_BALBcJ_G0010180.1 mouse_genomes_project 1 74119854 74120254 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100329.1 MGP_BALBcJ_G0038365.1 mouse_genomes_project 1 23729895 23730001 + Gm24064 snoRNA snoRNA MGP_BALBcJ_T0002827.1 MGP_BALBcJ_G0002674.1 mouse_genomes_project 1 84426924 84427789 - Gm28626 antisense antisense MGP_BALBcJ_T0002735.1 MGP_BALBcJ_G0002606.1 mouse_genomes_project 1 11782135 11806045 + Gm9947 antisense antisense MGP_BALBcJ_T0002736.1 MGP_BALBcJ_G0002606.1 mouse_genomes_project 1 11784652 11787572 + Gm9947 antisense antisense MGP_BALBcJ_T0019320.1 MGP_BALBcJ_G0015873.1 mouse_genomes_project 1 34513347 34542413 + MGP_BALBcJ_P0019320 Cnga3 protein_coding protein_coding MGP_BALBcJ_T0019321.1 MGP_BALBcJ_G0015873.1 mouse_genomes_project 1 34517293 34565768 + MGP_BALBcJ_P0019321 Cnga3 protein_coding protein_coding MGP_BALBcJ_T0019322.1 MGP_BALBcJ_G0015873.1 mouse_genomes_project 1 34517293 34565768 + MGP_BALBcJ_P0019322 Cnga3 protein_coding protein_coding MGP_BALBcJ_T0019323.1 MGP_BALBcJ_G0015873.1 mouse_genomes_project 1 34518118 34566968 + MGP_BALBcJ_P0019323 Cnga3 protein_coding protein_coding MGP_BALBcJ_T0000483.1 MGP_BALBcJ_G0000421.1 mouse_genomes_project 1 59510926 59511208 + TEC TEC MGP_BALBcJ_T0023242.1 MGP_BALBcJ_G0016660.1 mouse_genomes_project 1 168489670 168527126 - MGP_BALBcJ_P0023242 Nuf2 protein_coding protein_coding MGP_BALBcJ_T0023243.1 MGP_BALBcJ_G0016660.1 mouse_genomes_project 1 168490047 168527090 - MGP_BALBcJ_P0023243 Nuf2 protein_coding protein_coding MGP_BALBcJ_T0023244.1 MGP_BALBcJ_G0016660.1 mouse_genomes_project 1 168497829 168517723 - MGP_BALBcJ_P0023244 Nuf2 protein_coding protein_coding MGP_BALBcJ_T0023245.1 MGP_BALBcJ_G0016660.1 mouse_genomes_project 1 168503147 168527073 - MGP_BALBcJ_P0023245 Nuf2 protein_coding protein_coding MGP_BALBcJ_T0023246.1 MGP_BALBcJ_G0016660.1 mouse_genomes_project 1 168520361 168527080 - Nuf2 protein_coding retained_intron MGP_BALBcJ_T0005640.1 MGP_BALBcJ_G0004750.1 mouse_genomes_project 1 22120776 22122544 - Gm28237 lincRNA lincRNA MGP_BALBcJ_T0005641.1 MGP_BALBcJ_G0004750.1 mouse_genomes_project 1 22121563 22122726 - Gm28237 lincRNA lincRNA MGP_BALBcJ_T0098806.1 MGP_BALBcJ_G0036859.1 mouse_genomes_project 1 159753555 159754195 - Gm37328 sense_intronic sense_intronic MGP_BALBcJ_T0023512.1 MGP_BALBcJ_G0016720.1 mouse_genomes_project 1 171311739 171321767 - MGP_BALBcJ_P0023512 Pea15a protein_coding protein_coding MGP_BALBcJ_T0023513.1 MGP_BALBcJ_G0016720.1 mouse_genomes_project 1 171311739 171321767 - MGP_BALBcJ_P0023513 Pea15a protein_coding protein_coding MGP_BALBcJ_T0023514.1 MGP_BALBcJ_G0016720.1 mouse_genomes_project 1 171313424 171314824 - Pea15a protein_coding processed_transcript MGP_BALBcJ_T0023515.1 MGP_BALBcJ_G0016720.1 mouse_genomes_project 1 171314169 171321660 - MGP_BALBcJ_P0023515 Pea15a protein_coding protein_coding MGP_BALBcJ_T0023516.1 MGP_BALBcJ_G0016720.1 mouse_genomes_project 1 171314783 171321767 - Pea15a protein_coding retained_intron MGP_BALBcJ_T0011229.1 MGP_BALBcJ_G0009354.1 mouse_genomes_project 1 83901671 83901921 + Gm22906 misc_RNA misc_RNA MGP_BALBcJ_T0006003.1 MGP_BALBcJ_G0005028.1 mouse_genomes_project 1 183874296 183880377 - Gm37712 lincRNA lincRNA MGP_BALBcJ_T0012168.1 MGP_BALBcJ_G0010265.1 mouse_genomes_project 1 110900676 110901345 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006022.1 MGP_BALBcJ_G0005043.1 mouse_genomes_project 1 187804738 187816477 + Gm38064 lincRNA lincRNA MGP_BALBcJ_T0005869.1 MGP_BALBcJ_G0004923.1 mouse_genomes_project 1 124155323 124158153 + Gm28706 lincRNA lincRNA MGP_BALBcJ_T0009517.1 MGP_BALBcJ_G0007642.1 mouse_genomes_project 1 157504383 157504492 + Mir488 miRNA miRNA MGP_BALBcJ_T0000800.1 MGP_BALBcJ_G0000733.1 mouse_genomes_project 1 194574808 194577746 + TEC TEC MGP_BALBcJ_T0011974.1 MGP_BALBcJ_G0010071.1 mouse_genomes_project 1 41599154 41600111 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019209.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33421680 33526403 - MGP_BALBcJ_P0019209 Uggt1 protein_coding protein_coding MGP_BALBcJ_T0019210.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33425135 33447465 - Uggt1 protein_coding retained_intron MGP_BALBcJ_T0019211.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33425139 33526259 - MGP_BALBcJ_P0019211 Uggt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019212.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33427810 33432178 - Uggt1 protein_coding retained_intron MGP_BALBcJ_T0019213.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33443400 33455489 - MGP_BALBcJ_P0019213 Uggt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019214.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33443879 33464594 - MGP_BALBcJ_P0019214 Uggt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019215.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33445032 33446613 - Uggt1 protein_coding retained_intron MGP_BALBcJ_T0019216.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33460618 33526205 - Uggt1 protein_coding retained_intron MGP_BALBcJ_T0019217.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33467846 33492289 - MGP_BALBcJ_P0019217 Uggt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019218.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33477934 33490463 - Uggt1 protein_coding retained_intron MGP_BALBcJ_T0019219.1 MGP_BALBcJ_G0015856.1 mouse_genomes_project 1 33525736 33526818 - Uggt1 protein_coding retained_intron MGP_BALBcJ_T0000711.1 MGP_BALBcJ_G0000647.1 mouse_genomes_project 1 159940772 159944358 + TEC TEC MGP_BALBcJ_T0000746.1 MGP_BALBcJ_G0000682.1 mouse_genomes_project 1 176342973 176344505 - TEC TEC MGP_BALBcJ_T0024205.1 MGP_BALBcJ_G0016888.1 mouse_genomes_project 1 191580652 191582066 - Traf5 protein_coding retained_intron MGP_BALBcJ_T0024206.1 MGP_BALBcJ_G0016888.1 mouse_genomes_project 1 191580652 191583420 - MGP_BALBcJ_P0024206 Traf5 protein_coding protein_coding MGP_BALBcJ_T0024207.1 MGP_BALBcJ_G0016888.1 mouse_genomes_project 1 191580877 191607421 - MGP_BALBcJ_P0024207 Traf5 protein_coding unknown_likely_coding MGP_BALBcJ_T0024208.1 MGP_BALBcJ_G0016888.1 mouse_genomes_project 1 191580877 191628815 - MGP_BALBcJ_P0024208 Traf5 protein_coding protein_coding MGP_BALBcJ_T0024209.1 MGP_BALBcJ_G0016888.1 mouse_genomes_project 1 191590252 191594830 - MGP_BALBcJ_P0024209 Traf5 protein_coding protein_coding MGP_BALBcJ_T0024210.1 MGP_BALBcJ_G0016888.1 mouse_genomes_project 1 191591279 191594830 - Traf5 protein_coding retained_intron MGP_BALBcJ_T0002855.1 MGP_BALBcJ_G0002696.1 mouse_genomes_project 1 126468989 126489451 - 2900009J06Rik antisense antisense MGP_BALBcJ_T0002856.1 MGP_BALBcJ_G0002696.1 mouse_genomes_project 1 126468989 126489489 - 2900009J06Rik antisense antisense MGP_BALBcJ_T0023901.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181369639 181397418 - MGP_BALBcJ_P0023901 Lbr protein_coding protein_coding MGP_BALBcJ_T0023902.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181369660 181374838 - Lbr protein_coding retained_intron MGP_BALBcJ_T0023903.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181374175 181383100 - MGP_BALBcJ_P0023903 Lbr protein_coding protein_coding MGP_BALBcJ_T0023904.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181375852 181383368 - Lbr protein_coding retained_intron MGP_BALBcJ_T0023905.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181391075 181398085 - MGP_BALBcJ_P0023905 Lbr protein_coding protein_coding MGP_BALBcJ_T0023906.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181391104 181397400 - MGP_BALBcJ_P0023906 Lbr protein_coding protein_coding MGP_BALBcJ_T0023907.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181391255 181397898 - MGP_BALBcJ_P0023907 Lbr protein_coding protein_coding MGP_BALBcJ_T0023908.1 MGP_BALBcJ_G0016825.1 mouse_genomes_project 1 181393504 181397365 - MGP_BALBcJ_P0023908 Lbr protein_coding protein_coding MGP_BALBcJ_T0019290.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33988710 34000585 - MGP_BALBcJ_P0019290 Actr1b protein_coding protein_coding MGP_BALBcJ_T0019291.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33991809 33992239 - Actr1b protein_coding retained_intron MGP_BALBcJ_T0019292.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33992248 34000524 - Actr1b protein_coding retained_intron MGP_BALBcJ_T0019293.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33992339 34000255 - MGP_BALBcJ_P0019293 Actr1b protein_coding protein_coding MGP_BALBcJ_T0019294.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33992360 34005187 - MGP_BALBcJ_P0019294 Actr1b protein_coding protein_coding MGP_BALBcJ_T0019295.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33993058 33997744 - Actr1b protein_coding retained_intron MGP_BALBcJ_T0019296.1 MGP_BALBcJ_G0015869.1 mouse_genomes_project 1 33997124 34000496 - Actr1b protein_coding processed_transcript MGP_BALBcJ_T0101577.1 MGP_BALBcJ_G0039612.1 mouse_genomes_project 1 34054088 34054398 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101578.1 MGP_BALBcJ_G0039612.1 mouse_genomes_project 1 34054243 34055100 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0000667.1 MGP_BALBcJ_G0000603.1 mouse_genomes_project 1 148354536 148355993 - TEC TEC MGP_BALBcJ_T0011933.1 MGP_BALBcJ_G0010030.1 mouse_genomes_project 1 28811861 28813722 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023766.1 MGP_BALBcJ_G0016799.1 mouse_genomes_project 1 179198986 179250738 - MGP_BALBcJ_P0023766 Gm1305 protein_coding protein_coding MGP_BALBcJ_T0019679.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49759324 49829136 - MGP_BALBcJ_P0019679 Gls protein_coding protein_coding MGP_BALBcJ_T0019680.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49761817 49828209 - MGP_BALBcJ_P0019680 Gls protein_coding protein_coding MGP_BALBcJ_T0019681.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49762004 49786781 - MGP_BALBcJ_P0019681 Gls protein_coding protein_coding MGP_BALBcJ_T0019682.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49762140 49764852 - Gls protein_coding retained_intron MGP_BALBcJ_T0019683.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49762158 49765022 - Gls protein_coding retained_intron MGP_BALBcJ_T0019684.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49764323 49786782 - Gls protein_coding retained_intron MGP_BALBcJ_T0019685.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49779969 49829145 - MGP_BALBcJ_P0019685 Gls protein_coding protein_coding MGP_BALBcJ_T0019686.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49781151 49796352 - Gls protein_coding retained_intron MGP_BALBcJ_T0019687.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49781151 49808089 - MGP_BALBcJ_P0019687 Gls protein_coding protein_coding MGP_BALBcJ_T0019688.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49783554 49786781 - MGP_BALBcJ_P0019688 Gls protein_coding protein_coding MGP_BALBcJ_T0019689.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49785339 49793246 - Gls protein_coding retained_intron MGP_BALBcJ_T0019690.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49787071 49811473 - Gls protein_coding processed_transcript MGP_BALBcJ_T0019691.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49792349 49796244 - Gls protein_coding retained_intron MGP_BALBcJ_T0019692.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49800046 49811473 - Gls protein_coding retained_intron MGP_BALBcJ_T0019693.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49801057 49810412 - Gls protein_coding retained_intron MGP_BALBcJ_T0019694.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49803177 49811822 - Gls protein_coding retained_intron MGP_BALBcJ_T0019695.1 MGP_BALBcJ_G0015946.1 mouse_genomes_project 1 49810396 49828724 - Gls protein_coding processed_transcript MGP_BALBcJ_T0021828.1 MGP_BALBcJ_G0016371.1 mouse_genomes_project 1 126993968 127038090 - MGP_BALBcJ_P0021828 Lct protein_coding protein_coding MGP_BALBcJ_T0021829.1 MGP_BALBcJ_G0016371.1 mouse_genomes_project 1 126996784 127001463 - Lct protein_coding retained_intron MGP_BALBcJ_T0020129.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163373 61167035 + MGP_BALBcJ_P0020129 Eef1b2 protein_coding protein_coding MGP_BALBcJ_T0020130.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163677 61165911 + MGP_BALBcJ_P0020130 Eef1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020131.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163678 61166205 + MGP_BALBcJ_P0020131 Eef1b2 protein_coding protein_coding MGP_BALBcJ_T0020132.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163679 61165058 + Eef1b2 protein_coding processed_transcript MGP_BALBcJ_T0020133.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163693 61166171 + MGP_BALBcJ_P0020133 Eef1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020134.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163693 61166117 + MGP_BALBcJ_P0020134 Eef1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020135.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163695 61164972 + Eef1b2 protein_coding processed_transcript MGP_BALBcJ_T0020136.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163733 61165428 + MGP_BALBcJ_P0020136 Eef1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020137.1 MGP_BALBcJ_G0016024.1 mouse_genomes_project 1 61163771 61165447 + MGP_BALBcJ_P0020137 Eef1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018745.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5382385 6332481 - MGP_BALBcJ_P0018745 Sntg1 protein_coding protein_coding MGP_BALBcJ_T0018746.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5382385 6331816 - MGP_BALBcJ_P0018746 Sntg1 protein_coding protein_coding MGP_BALBcJ_T0018747.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5382385 6332107 - MGP_BALBcJ_P0018747 Sntg1 protein_coding protein_coding MGP_BALBcJ_T0018748.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5383588 6333122 - MGP_BALBcJ_P0018748 Sntg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018749.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5384093 5498616 - Sntg1 protein_coding processed_transcript MGP_BALBcJ_T0018750.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5384335 5498575 - Sntg1 protein_coding processed_transcript MGP_BALBcJ_T0018751.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5384385 5832005 - MGP_BALBcJ_P0018751 Sntg1 protein_coding protein_coding MGP_BALBcJ_T0018752.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5703097 6332525 - MGP_BALBcJ_P0018752 Sntg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018753.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5802905 6332752 - Sntg1 protein_coding retained_intron MGP_BALBcJ_T0018754.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5983370 5985483 - Sntg1 protein_coding retained_intron MGP_BALBcJ_T0018755.1 MGP_BALBcJ_G0015760.1 mouse_genomes_project 1 5983632 6331469 - Sntg1 protein_coding processed_transcript MGP_BALBcJ_T0012194.1 MGP_BALBcJ_G0010291.1 mouse_genomes_project 1 120848939 120849774 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002781.1 MGP_BALBcJ_G0002641.1 mouse_genomes_project 1 48748197 48751152 - Gm28319 antisense antisense MGP_BALBcJ_T0002801.1 MGP_BALBcJ_G0002656.1 mouse_genomes_project 1 60683688 60687039 - Gm29083 antisense antisense MGP_BALBcJ_T0012137.1 MGP_BALBcJ_G0010234.1 mouse_genomes_project 1 100311362 100311598 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012047.1 MGP_BALBcJ_G0010144.1 mouse_genomes_project 1 60628261 60629962 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022293.1 MGP_BALBcJ_G0016474.1 mouse_genomes_project 1 134696791 134747874 - MGP_BALBcJ_P0022293 Pkp1 protein_coding protein_coding MGP_BALBcJ_T0022294.1 MGP_BALBcJ_G0016474.1 mouse_genomes_project 1 134698346 134747787 - MGP_BALBcJ_P0022294 Pkp1 protein_coding protein_coding MGP_BALBcJ_T0022295.1 MGP_BALBcJ_G0016474.1 mouse_genomes_project 1 134698762 134747809 - MGP_BALBcJ_P0022295 Pkp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022296.1 MGP_BALBcJ_G0016474.1 mouse_genomes_project 1 134702714 134703672 - Pkp1 protein_coding retained_intron MGP_BALBcJ_T0000792.1 MGP_BALBcJ_G0000725.1 mouse_genomes_project 1 192806125 192808346 - TEC TEC MGP_BALBcJ_T0000466.1 MGP_BALBcJ_G0000404.1 mouse_genomes_project 1 52587019 52588429 - TEC TEC MGP_BALBcJ_T0021378.1 MGP_BALBcJ_G0016276.1 mouse_genomes_project 1 91708258 91716888 - Pask protein_coding retained_intron MGP_BALBcJ_T0021379.1 MGP_BALBcJ_G0016276.1 mouse_genomes_project 1 91708266 91742130 - MGP_BALBcJ_P0021379 Pask protein_coding protein_coding MGP_BALBcJ_T0021380.1 MGP_BALBcJ_G0016276.1 mouse_genomes_project 1 91709326 91712638 - Pask protein_coding retained_intron MGP_BALBcJ_T0021381.1 MGP_BALBcJ_G0016276.1 mouse_genomes_project 1 91709573 91710833 - Pask protein_coding retained_intron MGP_BALBcJ_T0021382.1 MGP_BALBcJ_G0016276.1 mouse_genomes_project 1 91717302 91742806 - Pask protein_coding retained_intron MGP_BALBcJ_T0021383.1 MGP_BALBcJ_G0016276.1 mouse_genomes_project 1 91736843 91742823 - MGP_BALBcJ_P0021383 Pask protein_coding protein_coding MGP_BALBcJ_T0102087.1 MGP_BALBcJ_G0039904.1 mouse_genomes_project 1 138435538 138509747 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012280.1 MGP_BALBcJ_G0010377.1 mouse_genomes_project 1 159918476 159918946 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000450.1 MGP_BALBcJ_G0000388.1 mouse_genomes_project 1 37431999 37435070 + TEC TEC MGP_BALBcJ_T0011831.1 MGP_BALBcJ_G0009928.1 mouse_genomes_project 1 1577815 1578265 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012115.1 MGP_BALBcJ_G0010212.1 mouse_genomes_project 1 89852770 89852963 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022392.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138036582 138223554 - MGP_BALBcJ_P0022392 Crb1 protein_coding protein_coding MGP_BALBcJ_T0022393.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138037758 138041777 - Crb1 protein_coding retained_intron MGP_BALBcJ_T0022394.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138069013 138223577 - MGP_BALBcJ_P0022394 Crb1 protein_coding protein_coding MGP_BALBcJ_T0022395.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138085131 138095706 - Crb1 protein_coding retained_intron MGP_BALBcJ_T0022396.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138087178 138223518 - MGP_BALBcJ_P0022396 Crb1 protein_coding protein_coding MGP_BALBcJ_T0022397.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138088240 138174111 - MGP_BALBcJ_P0022397 Crb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022398.1 MGP_BALBcJ_G0016494.1 mouse_genomes_project 1 138088255 138174131 - MGP_BALBcJ_P0022398 Crb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101591.1 MGP_BALBcJ_G0039618.1 mouse_genomes_project 1 171574297 171591349 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101592.1 MGP_BALBcJ_G0039618.1 mouse_genomes_project 1 171590413 171591267 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0002945.1 MGP_BALBcJ_G0002766.1 mouse_genomes_project 1 177815125 177818189 - antisense antisense MGP_BALBcJ_T0002774.1 MGP_BALBcJ_G0002635.1 mouse_genomes_project 1 38040351 38046546 - Gm37623 antisense antisense MGP_BALBcJ_T0017001.1 MGP_BALBcJ_G0015051.1 mouse_genomes_project 1 136743754 136744889 + Gm4258 processed_transcript retained_intron MGP_BALBcJ_T0017002.1 MGP_BALBcJ_G0015051.1 mouse_genomes_project 1 136743757 136844683 + Gm4258 processed_transcript lincRNA MGP_BALBcJ_T0022236.1 MGP_BALBcJ_G0016465.1 mouse_genomes_project 1 134140099 134185161 + MGP_BALBcJ_P0022236 Lmod1 protein_coding protein_coding MGP_BALBcJ_T0019733.1 MGP_BALBcJ_G0015953.1 mouse_genomes_project 1 50646108 50652546 + MGP_BALBcJ_P0019733 Mstn protein_coding protein_coding MGP_BALBcJ_T0019734.1 MGP_BALBcJ_G0015953.1 mouse_genomes_project 1 50646125 50652512 + MGP_BALBcJ_P0019734 Mstn protein_coding protein_coding MGP_BALBcJ_T0000689.1 MGP_BALBcJ_G0000625.1 mouse_genomes_project 1 155839368 155847694 - TEC TEC MGP_BALBcJ_T0012243.1 MGP_BALBcJ_G0010340.1 mouse_genomes_project 1 144179530 144179923 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019108.1 MGP_BALBcJ_G0015836.1 mouse_genomes_project 1 28479288 28480741 + MGP_BALBcJ_P0019108 Pih1d3 protein_coding protein_coding MGP_BALBcJ_T0023520.1 MGP_BALBcJ_G0016722.1 mouse_genomes_project 1 171338907 171374924 - MGP_BALBcJ_P0023520 Atp1a4 protein_coding protein_coding MGP_BALBcJ_T0023521.1 MGP_BALBcJ_G0016722.1 mouse_genomes_project 1 171363418 171370454 - Atp1a4 protein_coding processed_transcript MGP_BALBcJ_T0009533.1 MGP_BALBcJ_G0007658.1 mouse_genomes_project 1 180090587 180090654 + Mir6904 miRNA miRNA MGP_BALBcJ_T0005913.1 MGP_BALBcJ_G0004960.1 mouse_genomes_project 1 150546771 150548468 - Gm28181 lincRNA lincRNA MGP_BALBcJ_T0005713.1 MGP_BALBcJ_G0004800.1 mouse_genomes_project 1 55055995 55070296 - BC055402 lincRNA lincRNA MGP_BALBcJ_T0000722.1 MGP_BALBcJ_G0000658.1 mouse_genomes_project 1 164387394 164388729 + TEC TEC MGP_BALBcJ_T0011849.1 MGP_BALBcJ_G0009946.1 mouse_genomes_project 1 4176835 4177223 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000749.1 MGP_BALBcJ_G0000685.1 mouse_genomes_project 1 176469595 176472360 - TEC TEC MGP_BALBcJ_T0012026.1 MGP_BALBcJ_G0010123.1 mouse_genomes_project 1 55154035 55155012 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022715.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154845673 154972593 - MGP_BALBcJ_P0022715 Cep350 protein_coding unknown_likely_coding MGP_BALBcJ_T0022716.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154845679 154972881 - MGP_BALBcJ_P0022716 Cep350 protein_coding protein_coding MGP_BALBcJ_T0022717.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154849256 154862137 - Cep350 protein_coding processed_transcript MGP_BALBcJ_T0022718.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154864091 154888054 - Cep350 protein_coding processed_transcript MGP_BALBcJ_T0022719.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154869615 154886845 - Cep350 protein_coding processed_transcript MGP_BALBcJ_T0022720.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154936981 154972516 - MGP_BALBcJ_P0022720 Cep350 protein_coding protein_coding MGP_BALBcJ_T0022721.1 MGP_BALBcJ_G0016559.1 mouse_genomes_project 1 154969604 154972810 - Cep350 protein_coding retained_intron MGP_BALBcJ_T0012226.1 MGP_BALBcJ_G0010323.1 mouse_genomes_project 1 137699206 137699429 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012312.1 MGP_BALBcJ_G0010409.1 mouse_genomes_project 1 175561525 175561870 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020918.1 MGP_BALBcJ_G0016172.1 mouse_genomes_project 1 83832062 83851792 - A630001G21Rik protein_coding processed_transcript MGP_BALBcJ_T0020919.1 MGP_BALBcJ_G0016172.1 mouse_genomes_project 1 83832062 83895460 - MGP_BALBcJ_P0020919 A630001G21Rik protein_coding protein_coding MGP_BALBcJ_T0020920.1 MGP_BALBcJ_G0016172.1 mouse_genomes_project 1 83832668 83851840 - MGP_BALBcJ_P0020920 A630001G21Rik protein_coding protein_coding MGP_BALBcJ_T0020921.1 MGP_BALBcJ_G0016172.1 mouse_genomes_project 1 83832671 83851792 - MGP_BALBcJ_P0020921 A630001G21Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020922.1 MGP_BALBcJ_G0016172.1 mouse_genomes_project 1 83833069 83851765 - A630001G21Rik protein_coding processed_transcript MGP_BALBcJ_T0020923.1 MGP_BALBcJ_G0016172.1 mouse_genomes_project 1 83841593 83851772 - A630001G21Rik protein_coding processed_transcript MGP_BALBcJ_T0002944.1 MGP_BALBcJ_G0002765.1 mouse_genomes_project 1 177807165 177812567 - B230369F24Rik antisense antisense MGP_BALBcJ_T0012162.1 MGP_BALBcJ_G0010259.1 mouse_genomes_project 1 109861225 109862006 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019528.1 MGP_BALBcJ_G0015916.1 mouse_genomes_project 1 40480497 40497723 + MGP_BALBcJ_P0019528 AI597479 protein_coding protein_coding MGP_BALBcJ_T0011990.1 MGP_BALBcJ_G0010087.1 mouse_genomes_project 1 43342273 43343347 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020008.1 MGP_BALBcJ_G0016006.1 mouse_genomes_project 1 57519604 57605034 - Sumo1 protein_coding processed_transcript MGP_BALBcJ_T0020011.1 MGP_BALBcJ_G0016006.1 mouse_genomes_project 1 57572009 57605076 - MGP_BALBcJ_P0020011 Sumo1 protein_coding protein_coding MGP_BALBcJ_T0020012.1 MGP_BALBcJ_G0016006.1 mouse_genomes_project 1 57573308 57604981 - MGP_BALBcJ_P0020012 Sumo1 protein_coding protein_coding MGP_BALBcJ_T0020013.1 MGP_BALBcJ_G0016006.1 mouse_genomes_project 1 57577430 57605076 - Sumo1 protein_coding retained_intron MGP_BALBcJ_T0022142.1 MGP_BALBcJ_G0016444.1 mouse_genomes_project 1 132996303 133032225 - MGP_BALBcJ_P0022142 Adora1 protein_coding protein_coding MGP_BALBcJ_T0022143.1 MGP_BALBcJ_G0016444.1 mouse_genomes_project 1 132996305 133033078 - MGP_BALBcJ_P0022143 Adora1 protein_coding protein_coding MGP_BALBcJ_T0022144.1 MGP_BALBcJ_G0016444.1 mouse_genomes_project 1 132998429 133033044 - MGP_BALBcJ_P0022144 Adora1 protein_coding protein_coding MGP_BALBcJ_T0022145.1 MGP_BALBcJ_G0016444.1 mouse_genomes_project 1 133000477 133033011 - MGP_BALBcJ_P0022145 Adora1 protein_coding protein_coding MGP_BALBcJ_T0012209.1 MGP_BALBcJ_G0010306.1 mouse_genomes_project 1 128508182 128511415 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021935.1 MGP_BALBcJ_G0016400.1 mouse_genomes_project 1 130447075 130473353 + MGP_BALBcJ_P0021935 Rab7b protein_coding protein_coding MGP_BALBcJ_T0021936.1 MGP_BALBcJ_G0016400.1 mouse_genomes_project 1 130447087 130470497 + MGP_BALBcJ_P0021936 Rab7b protein_coding protein_coding MGP_BALBcJ_T0021937.1 MGP_BALBcJ_G0016400.1 mouse_genomes_project 1 130447118 130469414 + MGP_BALBcJ_P0021937 Rab7b protein_coding protein_coding MGP_BALBcJ_T0021938.1 MGP_BALBcJ_G0016400.1 mouse_genomes_project 1 130447146 130469581 + MGP_BALBcJ_P0021938 Rab7b protein_coding protein_coding MGP_BALBcJ_T0021939.1 MGP_BALBcJ_G0016400.1 mouse_genomes_project 1 130454844 130463834 + Rab7b protein_coding processed_transcript MGP_BALBcJ_T0023049.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162936830 162962661 + MGP_BALBcJ_P0023049 Scyl3 protein_coding protein_coding MGP_BALBcJ_T0023050.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162937491 162963085 + MGP_BALBcJ_P0023050 Scyl3 protein_coding protein_coding MGP_BALBcJ_T0023051.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162937516 162963069 + MGP_BALBcJ_P0023051 Scyl3 protein_coding protein_coding MGP_BALBcJ_T0023052.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162937531 162963068 + MGP_BALBcJ_P0023052 Scyl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023053.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162949073 162963073 + MGP_BALBcJ_P0023053 Scyl3 protein_coding protein_coding MGP_BALBcJ_T0023054.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162951729 162952803 + Scyl3 protein_coding processed_transcript MGP_BALBcJ_T0023056.1 MGP_BALBcJ_G0016616.1 mouse_genomes_project 1 162959171 162961761 + Scyl3 protein_coding retained_intron MGP_BALBcJ_T0102095.1 MGP_BALBcJ_G0039912.1 mouse_genomes_project 1 172267747 172268930 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005997.1 MGP_BALBcJ_G0005026.1 mouse_genomes_project 1 183415327 183416153 + Gm38108 lincRNA lincRNA MGP_BALBcJ_T0023577.1 MGP_BALBcJ_G0016739.1 mouse_genomes_project 1 172246883 172247920 - MGP_BALBcJ_P0023577 Olfr1408 protein_coding protein_coding MGP_BALBcJ_T0023578.1 MGP_BALBcJ_G0016739.1 mouse_genomes_project 1 172246883 172254168 - MGP_BALBcJ_P0023578 Olfr1408 protein_coding protein_coding MGP_BALBcJ_T0099116.1 MGP_BALBcJ_G0037152.1 mouse_genomes_project 1 117309101 117309231 + Gm23497 snRNA snRNA MGP_BALBcJ_T0102091.1 MGP_BALBcJ_G0039908.1 mouse_genomes_project 1 168847921 168848125 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009444.1 MGP_BALBcJ_G0007569.1 mouse_genomes_project 1 20404065 20404136 + Mir30a miRNA miRNA MGP_BALBcJ_T0005795.1 MGP_BALBcJ_G0004862.1 mouse_genomes_project 1 86885651 86897128 + Gm19589 lincRNA lincRNA MGP_BALBcJ_T0017043.1 MGP_BALBcJ_G0015062.1 mouse_genomes_project 1 170793560 170798810 - A630035G10Rik processed_transcript lincRNA MGP_BALBcJ_T0017044.1 MGP_BALBcJ_G0015062.1 mouse_genomes_project 1 170796996 170798853 - A630035G10Rik processed_transcript retained_intron MGP_BALBcJ_T0012228.1 MGP_BALBcJ_G0010325.1 mouse_genomes_project 1 137825194 137825828 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002904.1 MGP_BALBcJ_G0002734.1 mouse_genomes_project 1 158962262 158965602 - Gm38039 antisense antisense MGP_BALBcJ_T0099086.1 MGP_BALBcJ_G0037122.1 mouse_genomes_project 1 50027338 50027447 - Gm23460 snRNA snRNA MGP_BALBcJ_T0100347.1 MGP_BALBcJ_G0038383.1 mouse_genomes_project 1 57639254 57639338 + Snord11 snoRNA snoRNA MGP_BALBcJ_T0009520.1 MGP_BALBcJ_G0007645.1 mouse_genomes_project 1 161257518 161257628 + Mir199a-2 miRNA miRNA MGP_BALBcJ_T0002980.1 MGP_BALBcJ_G0002792.1 mouse_genomes_project 1 191569633 191573566 - Gm26670 antisense antisense MGP_BALBcJ_T0023933.1 MGP_BALBcJ_G0016830.1 mouse_genomes_project 1 181868289 181897047 - MGP_BALBcJ_P0023933 Fbxo28 protein_coding protein_coding MGP_BALBcJ_T0023934.1 MGP_BALBcJ_G0016830.1 mouse_genomes_project 1 181870375 181873575 - Fbxo28 protein_coding retained_intron MGP_BALBcJ_T0023935.1 MGP_BALBcJ_G0016830.1 mouse_genomes_project 1 181871650 181897029 - MGP_BALBcJ_P0023935 Fbxo28 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023936.1 MGP_BALBcJ_G0016830.1 mouse_genomes_project 1 181872178 181897000 - MGP_BALBcJ_P0023936 Fbxo28 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023937.1 MGP_BALBcJ_G0016830.1 mouse_genomes_project 1 181872431 181897058 - MGP_BALBcJ_P0023937 Fbxo28 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000783.1 MGP_BALBcJ_G0000717.1 mouse_genomes_project 1 188615916 188617455 + TEC TEC MGP_BALBcJ_T0019084.1 MGP_BALBcJ_G0015831.1 mouse_genomes_project 1 26019682 26023793 - MGP_BALBcJ_P0019084 Gm597 protein_coding protein_coding MGP_BALBcJ_T0012261.1 MGP_BALBcJ_G0010358.1 mouse_genomes_project 1 151411332 151411784 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012033.1 MGP_BALBcJ_G0010130.1 mouse_genomes_project 1 57892597 57894659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022383.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137805116 137905111 + MGP_BALBcJ_P0022383 Dennd1b protein_coding protein_coding MGP_BALBcJ_T0022384.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137805390 138015669 + MGP_BALBcJ_P0022384 Dennd1b protein_coding protein_coding MGP_BALBcJ_T0022385.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137805409 137927317 + MGP_BALBcJ_P0022385 Dennd1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022386.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137805550 138018573 + MGP_BALBcJ_P0022386 Dennd1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022387.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137809678 138015669 + MGP_BALBcJ_P0022387 Dennd1b protein_coding protein_coding MGP_BALBcJ_T0022388.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137895713 137898509 + Dennd1b protein_coding retained_intron MGP_BALBcJ_T0022389.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137927312 137974645 + Dennd1b protein_coding retained_intron MGP_BALBcJ_T0022390.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137964406 138015609 + Dennd1b protein_coding processed_transcript MGP_BALBcJ_T0022391.1 MGP_BALBcJ_G0016493.1 mouse_genomes_project 1 137972000 138013720 + Dennd1b protein_coding processed_transcript MGP_BALBcJ_T0021609.1 MGP_BALBcJ_G0016331.1 mouse_genomes_project 1 116631892 116817253 + MGP_BALBcJ_P0021609 protein_coding protein_coding MGP_BALBcJ_T0005787.1 MGP_BALBcJ_G0004855.1 mouse_genomes_project 1 81776144 82030453 - 4933436I20Rik lincRNA lincRNA MGP_BALBcJ_T0005788.1 MGP_BALBcJ_G0004855.1 mouse_genomes_project 1 81955424 82030485 - 4933436I20Rik lincRNA lincRNA MGP_BALBcJ_T0022445.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142650466 142682882 + MGP_BALBcJ_P0022445 Uchl5 protein_coding protein_coding MGP_BALBcJ_T0022446.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142650470 142657437 + Uchl5 protein_coding retained_intron MGP_BALBcJ_T0022447.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142650475 142683043 + MGP_BALBcJ_P0022447 Uchl5 protein_coding protein_coding MGP_BALBcJ_T0022448.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142650499 142659594 + Uchl5 protein_coding retained_intron MGP_BALBcJ_T0022449.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142650515 142675568 + MGP_BALBcJ_P0022449 Uchl5 protein_coding protein_coding MGP_BALBcJ_T0022450.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142656819 142670083 + Uchl5 protein_coding retained_intron MGP_BALBcJ_T0022451.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142669979 142672303 + Uchl5 protein_coding retained_intron MGP_BALBcJ_T0022452.1 MGP_BALBcJ_G0016507.1 mouse_genomes_project 1 142670021 142682518 + MGP_BALBcJ_P0022452 Uchl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009456.1 MGP_BALBcJ_G0007581.1 mouse_genomes_project 1 36503783 36503880 - Mir6349 miRNA miRNA MGP_BALBcJ_T0021890.1 MGP_BALBcJ_G0016389.1 mouse_genomes_project 1 129698607 129706018 - MGP_BALBcJ_P0021890 Il19 protein_coding protein_coding MGP_BALBcJ_T0021891.1 MGP_BALBcJ_G0016389.1 mouse_genomes_project 1 129698609 129705162 - MGP_BALBcJ_P0021891 Il19 protein_coding protein_coding MGP_BALBcJ_T0021892.1 MGP_BALBcJ_G0016389.1 mouse_genomes_project 1 129698767 129706032 - MGP_BALBcJ_P0021892 Il19 protein_coding protein_coding MGP_BALBcJ_T0021893.1 MGP_BALBcJ_G0016389.1 mouse_genomes_project 1 129698809 129705990 - MGP_BALBcJ_P0021893 Il19 protein_coding protein_coding MGP_BALBcJ_T0011222.1 MGP_BALBcJ_G0009347.1 mouse_genomes_project 1 47835743 47835875 - Gm27330 misc_RNA misc_RNA MGP_BALBcJ_T0100356.1 MGP_BALBcJ_G0038392.1 mouse_genomes_project 1 82038902 82039026 + Gm24555 snoRNA snoRNA MGP_BALBcJ_T0023993.1 MGP_BALBcJ_G0016842.1 mouse_genomes_project 1 182949286 182949908 + Hhipl2 protein_coding processed_transcript MGP_BALBcJ_T0023994.1 MGP_BALBcJ_G0016842.1 mouse_genomes_project 1 182949540 182968205 + MGP_BALBcJ_P0023994 Hhipl2 protein_coding protein_coding MGP_BALBcJ_T0023995.1 MGP_BALBcJ_G0016842.1 mouse_genomes_project 1 182949637 182955081 + Hhipl2 protein_coding processed_transcript MGP_BALBcJ_T0023996.1 MGP_BALBcJ_G0016842.1 mouse_genomes_project 1 182949842 182967884 + MGP_BALBcJ_P0023996 Hhipl2 protein_coding protein_coding MGP_BALBcJ_T0011234.1 MGP_BALBcJ_G0009359.1 mouse_genomes_project 1 140195776 140195890 + Gm22016 misc_RNA misc_RNA MGP_BALBcJ_T0021152.1 MGP_BALBcJ_G0016226.1 mouse_genomes_project 1 87412430 87492715 + MGP_BALBcJ_P0021152 Sh3bp4 protein_coding protein_coding MGP_BALBcJ_T0021153.1 MGP_BALBcJ_G0016226.1 mouse_genomes_project 1 87412468 87449922 + Sh3bp4 protein_coding processed_transcript MGP_BALBcJ_T0002752.1 MGP_BALBcJ_G0002618.1 mouse_genomes_project 1 31691251 31696464 - Gm28306 antisense antisense MGP_BALBcJ_T0011896.1 MGP_BALBcJ_G0009993.1 mouse_genomes_project 1 17512788 17514517 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021037.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482050 85510632 + Gigyf2 protein_coding processed_transcript MGP_BALBcJ_T0021038.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482055 85606949 + MGP_BALBcJ_P0021038 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021039.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482081 85605298 + MGP_BALBcJ_P0021039 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021040.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482082 85512694 + Gigyf2 protein_coding processed_transcript MGP_BALBcJ_T0021041.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482085 85580683 + MGP_BALBcJ_P0021041 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021042.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482098 85484060 + Gigyf2 protein_coding retained_intron MGP_BALBcJ_T0021043.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482100 85546253 + Gigyf2 protein_coding processed_transcript MGP_BALBcJ_T0021044.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85482118 85589891 + MGP_BALBcJ_P0021044 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021045.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85509355 85605298 + MGP_BALBcJ_P0021045 Gigyf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021046.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85509355 85605298 + MGP_BALBcJ_P0021046 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021047.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85518801 85534372 + Gigyf2 protein_coding retained_intron MGP_BALBcJ_T0021048.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85519160 85520655 + Gigyf2 protein_coding retained_intron MGP_BALBcJ_T0021049.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85541686 85562679 + Gigyf2 protein_coding processed_transcript MGP_BALBcJ_T0021050.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85541707 85562410 + MGP_BALBcJ_P0021050 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021053.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85559036 85598181 + MGP_BALBcJ_P0021053 Gigyf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021054.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85559095 85563068 + MGP_BALBcJ_P0021054 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021055.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85560282 85562978 + MGP_BALBcJ_P0021055 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021056.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85560314 85566069 + MGP_BALBcJ_P0021056 Gigyf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021057.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85560330 85562733 + MGP_BALBcJ_P0021057 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021058.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85562745 85575712 + MGP_BALBcJ_P0021058 Gigyf2 protein_coding protein_coding MGP_BALBcJ_T0021059.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85575580 85577161 + Gigyf2 protein_coding retained_intron MGP_BALBcJ_T0021060.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85589211 85606949 + Gigyf2 protein_coding processed_transcript MGP_BALBcJ_T0021061.1 MGP_BALBcJ_G0016201.1 mouse_genomes_project 1 85599476 85605361 + Gigyf2 protein_coding retained_intron MGP_BALBcJ_T0020612.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73197912 73202979 - MGP_BALBcJ_P0020612 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0020613.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73198656 73202309 - MGP_BALBcJ_P0020613 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0020614.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73199296 73201119 - MGP_BALBcJ_P0020614 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0020615.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73199640 73201099 - MGP_BALBcJ_P0020615 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0020616.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73200119 73202928 - Tuba4a protein_coding retained_intron MGP_BALBcJ_T0020617.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73200541 73203550 - MGP_BALBcJ_P0020617 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0020618.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73200573 73202573 - MGP_BALBcJ_P0020618 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0020619.1 MGP_BALBcJ_G0016117.1 mouse_genomes_project 1 73200597 73202573 - MGP_BALBcJ_P0020619 Tuba4a protein_coding protein_coding MGP_BALBcJ_T0012079.1 MGP_BALBcJ_G0010176.1 mouse_genomes_project 1 73535199 73535547 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018973.1 MGP_BALBcJ_G0015801.1 mouse_genomes_project 1 15174580 15204834 - Crisp4 protein_coding retained_intron MGP_BALBcJ_T0018974.1 MGP_BALBcJ_G0015801.1 mouse_genomes_project 1 15174580 15204840 - MGP_BALBcJ_P0018974 Crisp4 protein_coding protein_coding MGP_BALBcJ_T0018975.1 MGP_BALBcJ_G0015801.1 mouse_genomes_project 1 15174593 15196812 - MGP_BALBcJ_P0018975 Crisp4 protein_coding protein_coding MGP_BALBcJ_T0018976.1 MGP_BALBcJ_G0015801.1 mouse_genomes_project 1 15174989 15204840 - MGP_BALBcJ_P0018976 Crisp4 protein_coding protein_coding MGP_BALBcJ_T0022409.1 MGP_BALBcJ_G0016498.1 mouse_genomes_project 1 138388403 138401458 - MGP_BALBcJ_P0022409 Cfhr1 protein_coding protein_coding MGP_BALBcJ_T0022410.1 MGP_BALBcJ_G0016498.1 mouse_genomes_project 1 138391780 138394698 - MGP_BALBcJ_P0022410 Cfhr1 protein_coding protein_coding MGP_BALBcJ_T0012100.1 MGP_BALBcJ_G0010197.1 mouse_genomes_project 1 81440233 81441021 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023956.1 MGP_BALBcJ_G0016836.1 mouse_genomes_project 1 182523024 182544058 + MGP_BALBcJ_P0023956 Tlr5 protein_coding protein_coding MGP_BALBcJ_T0023957.1 MGP_BALBcJ_G0016836.1 mouse_genomes_project 1 182523024 182544411 + MGP_BALBcJ_P0023957 Tlr5 protein_coding protein_coding MGP_BALBcJ_T0023958.1 MGP_BALBcJ_G0016836.1 mouse_genomes_project 1 182523058 182538547 + Tlr5 protein_coding processed_transcript MGP_BALBcJ_T0023959.1 MGP_BALBcJ_G0016836.1 mouse_genomes_project 1 182523064 182538311 + Tlr5 protein_coding processed_transcript MGP_BALBcJ_T0023960.1 MGP_BALBcJ_G0016836.1 mouse_genomes_project 1 182540542 182544366 + MGP_BALBcJ_P0023960 Tlr5 protein_coding protein_coding MGP_BALBcJ_T0023825.1 MGP_BALBcJ_G0016806.1 mouse_genomes_project 1 179931629 179982995 - MGP_BALBcJ_P0023825 Stum protein_coding protein_coding MGP_BALBcJ_T0023826.1 MGP_BALBcJ_G0016806.1 mouse_genomes_project 1 179937828 179983032 - MGP_BALBcJ_P0023826 Stum protein_coding protein_coding MGP_BALBcJ_T0000383.1 MGP_BALBcJ_G0000324.1 mouse_genomes_project 1 12407063 12408596 + TEC TEC MGP_BALBcJ_T0000537.1 MGP_BALBcJ_G0000475.1 mouse_genomes_project 1 82903372 82905405 - TEC TEC MGP_BALBcJ_T0006019.1 MGP_BALBcJ_G0005041.1 mouse_genomes_project 1 186475787 186478967 + 1700023G09Rik lincRNA lincRNA MGP_BALBcJ_T0006020.1 MGP_BALBcJ_G0005041.1 mouse_genomes_project 1 186475816 186478181 + 1700023G09Rik lincRNA lincRNA MGP_BALBcJ_T0022772.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155621747 155642489 - MGP_BALBcJ_P0022772 Tor3a protein_coding protein_coding MGP_BALBcJ_T0022773.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155621747 155642489 - MGP_BALBcJ_P0022773 Tor3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022774.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155621747 155642458 - MGP_BALBcJ_P0022774 Tor3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022775.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155623171 155642447 - MGP_BALBcJ_P0022775 Tor3a protein_coding protein_coding MGP_BALBcJ_T0022776.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155623800 155626541 - Tor3a protein_coding processed_transcript MGP_BALBcJ_T0022777.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155628906 155634886 - Tor3a protein_coding processed_transcript MGP_BALBcJ_T0022778.1 MGP_BALBcJ_G0016568.1 mouse_genomes_project 1 155634847 155642468 - MGP_BALBcJ_P0022778 Tor3a protein_coding protein_coding MGP_BALBcJ_T0011855.1 MGP_BALBcJ_G0009952.1 mouse_genomes_project 1 4728027 4728906 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000793.1 MGP_BALBcJ_G0000726.1 mouse_genomes_project 1 192827749 192831391 + TEC TEC MGP_BALBcJ_T0019445.1 MGP_BALBcJ_G0015897.1 mouse_genomes_project 1 36875171 36901583 - MGP_BALBcJ_P0019445 Rnf149 protein_coding protein_coding MGP_BALBcJ_T0019446.1 MGP_BALBcJ_G0015897.1 mouse_genomes_project 1 36876341 36901534 - MGP_BALBcJ_P0019446 Rnf149 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019447.1 MGP_BALBcJ_G0015897.1 mouse_genomes_project 1 36879475 36882628 - Rnf149 protein_coding retained_intron MGP_BALBcJ_T0019448.1 MGP_BALBcJ_G0015897.1 mouse_genomes_project 1 36888963 36901481 - MGP_BALBcJ_P0019448 Rnf149 protein_coding protein_coding MGP_BALBcJ_T0002786.1 MGP_BALBcJ_G0002645.1 mouse_genomes_project 1 53089863 53098938 + Gm10561 antisense antisense MGP_BALBcJ_T0098793.1 MGP_BALBcJ_G0036846.1 mouse_genomes_project 1 80836051 80837068 + Gm28941 sense_intronic sense_intronic MGP_BALBcJ_T0020552.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152437 73155417 + Zfand2b protein_coding retained_intron MGP_BALBcJ_T0020553.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152437 73155421 + MGP_BALBcJ_P0020553 Zfand2b protein_coding protein_coding MGP_BALBcJ_T0020554.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152437 73154544 + MGP_BALBcJ_P0020554 Zfand2b protein_coding protein_coding MGP_BALBcJ_T0020555.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152446 73155417 + MGP_BALBcJ_P0020555 Zfand2b protein_coding protein_coding MGP_BALBcJ_T0020556.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152449 73153684 + Zfand2b protein_coding retained_intron MGP_BALBcJ_T0020557.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152457 73153423 + Zfand2b protein_coding retained_intron MGP_BALBcJ_T0020558.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152492 73154361 + Zfand2b protein_coding retained_intron MGP_BALBcJ_T0020559.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152569 73154479 + Zfand2b protein_coding retained_intron MGP_BALBcJ_T0020560.1 MGP_BALBcJ_G0016111.1 mouse_genomes_project 1 73152719 73155194 + MGP_BALBcJ_P0020560 Zfand2b protein_coding protein_coding MGP_BALBcJ_T0100346.1 MGP_BALBcJ_G0038382.1 mouse_genomes_project 1 57638722 57638803 + Gm26287 snoRNA snoRNA MGP_BALBcJ_T0023705.1 MGP_BALBcJ_G0016783.1 mouse_genomes_project 1 176315225 176544689 - MGP_BALBcJ_P0023705 Akt3 protein_coding protein_coding MGP_BALBcJ_T0023706.1 MGP_BALBcJ_G0016783.1 mouse_genomes_project 1 176317267 176544660 - MGP_BALBcJ_P0023706 Akt3 protein_coding protein_coding MGP_BALBcJ_T0023707.1 MGP_BALBcJ_G0016783.1 mouse_genomes_project 1 176317268 176554560 - MGP_BALBcJ_P0023707 Akt3 protein_coding protein_coding MGP_BALBcJ_T0005979.1 MGP_BALBcJ_G0005013.1 mouse_genomes_project 1 180270781 180276991 - Gm38293 lincRNA lincRNA MGP_BALBcJ_T0024082.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188515934 188554022 - MGP_BALBcJ_P0024082 Kctd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024083.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188515934 188554034 - MGP_BALBcJ_P0024083 Kctd3 protein_coding protein_coding MGP_BALBcJ_T0024084.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188517090 188519462 - Kctd3 protein_coding retained_intron MGP_BALBcJ_T0024085.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188517203 188519080 - Kctd3 protein_coding retained_intron MGP_BALBcJ_T0024086.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188517315 188524269 - MGP_BALBcJ_P0024086 Kctd3 protein_coding protein_coding MGP_BALBcJ_T0024087.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188517358 188518579 - Kctd3 protein_coding retained_intron MGP_BALBcJ_T0024088.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188518640 188522282 - Kctd3 protein_coding processed_transcript MGP_BALBcJ_T0024089.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188524219 188527479 - Kctd3 protein_coding retained_intron MGP_BALBcJ_T0024090.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188526469 188554035 - Kctd3 protein_coding retained_intron MGP_BALBcJ_T0024091.1 MGP_BALBcJ_G0016863.1 mouse_genomes_project 1 188541283 188543915 - Kctd3 protein_coding retained_intron MGP_BALBcJ_T0102098.1 MGP_BALBcJ_G0039915.1 mouse_genomes_project 1 173069988 173254800 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100395.1 MGP_BALBcJ_G0038431.1 mouse_genomes_project 1 160061162 160061245 + Gm22357 snoRNA snoRNA MGP_BALBcJ_T0002937.1 MGP_BALBcJ_G0002759.1 mouse_genomes_project 1 171328008 171328668 + Gm17224 antisense antisense MGP_BALBcJ_T0009496.1 MGP_BALBcJ_G0007621.1 mouse_genomes_project 1 94698221 94698310 - Gm24586 miRNA miRNA MGP_BALBcJ_T0000684.1 MGP_BALBcJ_G0000620.1 mouse_genomes_project 1 155252918 155253555 - TEC TEC MGP_BALBcJ_T0021929.1 MGP_BALBcJ_G0016397.1 mouse_genomes_project 1 130297043 130309015 + MGP_BALBcJ_P0021929 Fam72a protein_coding protein_coding MGP_BALBcJ_T0000345.1 MGP_BALBcJ_G0000286.1 mouse_genomes_project 1 498627 500936 - TEC TEC MGP_BALBcJ_T0005643.1 MGP_BALBcJ_G0004752.1 mouse_genomes_project 1 25067927 25093064 + Gm5524 lincRNA lincRNA MGP_BALBcJ_T0012084.1 MGP_BALBcJ_G0010181.1 mouse_genomes_project 1 75597281 75597573 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000539.1 MGP_BALBcJ_G0000477.1 mouse_genomes_project 1 84242625 84245304 + TEC TEC MGP_BALBcJ_T0005860.1 MGP_BALBcJ_G0004917.1 mouse_genomes_project 1 119728670 119763080 + Celrr lincRNA lincRNA MGP_BALBcJ_T0005861.1 MGP_BALBcJ_G0004917.1 mouse_genomes_project 1 119728736 119759879 + Celrr lincRNA lincRNA MGP_BALBcJ_T0005862.1 MGP_BALBcJ_G0004917.1 mouse_genomes_project 1 119728739 119819577 + Celrr lincRNA lincRNA MGP_BALBcJ_T0005863.1 MGP_BALBcJ_G0004917.1 mouse_genomes_project 1 119728794 119730198 + Celrr lincRNA lincRNA MGP_BALBcJ_T0021143.1 MGP_BALBcJ_G0016222.1 mouse_genomes_project 1 86624104 86718541 + MGP_BALBcJ_P0021143 Trpm8 protein_coding protein_coding MGP_BALBcJ_T0021144.1 MGP_BALBcJ_G0016222.1 mouse_genomes_project 1 86629249 86718983 + MGP_BALBcJ_P0021144 Trpm8 protein_coding protein_coding MGP_BALBcJ_T0021145.1 MGP_BALBcJ_G0016222.1 mouse_genomes_project 1 86649571 86718541 + MGP_BALBcJ_P0021145 Trpm8 protein_coding protein_coding MGP_BALBcJ_T0019430.1 MGP_BALBcJ_G0015893.1 mouse_genomes_project 1 36511041 36604835 + MGP_BALBcJ_P0019430 Npas2 protein_coding protein_coding MGP_BALBcJ_T0019431.1 MGP_BALBcJ_G0015893.1 mouse_genomes_project 1 36511522 36681299 + MGP_BALBcJ_P0019431 Npas2 protein_coding protein_coding MGP_BALBcJ_T0019432.1 MGP_BALBcJ_G0015893.1 mouse_genomes_project 1 36658863 36663275 + Npas2 protein_coding processed_transcript MGP_BALBcJ_T0000382.1 MGP_BALBcJ_G0000323.1 mouse_genomes_project 1 11817202 11821523 + TEC TEC MGP_BALBcJ_T0012235.1 MGP_BALBcJ_G0010332.1 mouse_genomes_project 1 141647639 141647934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000380.1 MGP_BALBcJ_G0000321.1 mouse_genomes_project 1 11133096 11136701 - TEC TEC MGP_BALBcJ_T0024053.1 MGP_BALBcJ_G0016857.1 mouse_genomes_project 1 186275272 186300575 - MGP_BALBcJ_P0024053 Rrp15 protein_coding protein_coding MGP_BALBcJ_T0024054.1 MGP_BALBcJ_G0016857.1 mouse_genomes_project 1 186275386 186300542 - Rrp15 protein_coding retained_intron MGP_BALBcJ_T0005701.1 MGP_BALBcJ_G0004792.1 mouse_genomes_project 1 49106706 49111947 - Gm17767 lincRNA lincRNA MGP_BALBcJ_T0005702.1 MGP_BALBcJ_G0004792.1 mouse_genomes_project 1 49109123 49195713 - Gm17767 lincRNA lincRNA MGP_BALBcJ_T0005969.1 MGP_BALBcJ_G0005004.1 mouse_genomes_project 1 170494734 170508455 - Gm26641 lincRNA lincRNA MGP_BALBcJ_T0006015.1 MGP_BALBcJ_G0005038.1 mouse_genomes_project 1 185718148 185767106 + Gm37134 lincRNA lincRNA MGP_BALBcJ_T0020645.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73291967 73301709 - MGP_BALBcJ_P0020645 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020646.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73291967 73301731 - MGP_BALBcJ_P0020646 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020647.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73292011 73301065 - MGP_BALBcJ_P0020647 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020648.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73292636 73301017 - MGP_BALBcJ_P0020648 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020649.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73292636 73301221 - MGP_BALBcJ_P0020649 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020650.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73293254 73297831 - Dnpep protein_coding retained_intron MGP_BALBcJ_T0020651.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73296539 73301481 - Dnpep protein_coding retained_intron MGP_BALBcJ_T0020652.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73298435 73300875 - MGP_BALBcJ_P0020652 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020653.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73298438 73301093 - MGP_BALBcJ_P0020653 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020654.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73299273 73301385 - MGP_BALBcJ_P0020654 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020655.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73300055 73301519 - MGP_BALBcJ_P0020655 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020656.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73300418 73301444 - Dnpep protein_coding retained_intron MGP_BALBcJ_T0020657.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73300441 73302062 - MGP_BALBcJ_P0020657 Dnpep protein_coding protein_coding MGP_BALBcJ_T0020658.1 MGP_BALBcJ_G0016122.1 mouse_genomes_project 1 73300625 73301454 - MGP_BALBcJ_P0020658 Dnpep protein_coding protein_coding MGP_BALBcJ_T0019027.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19433052 19934591 - MGP_BALBcJ_P0019027 protein_coding protein_coding MGP_BALBcJ_T0019028.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19433052 19934591 - MGP_BALBcJ_P0019028 protein_coding protein_coding MGP_BALBcJ_T0019029.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19433052 19934591 - MGP_BALBcJ_P0019029 protein_coding protein_coding MGP_BALBcJ_T0019030.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19433052 19934591 - MGP_BALBcJ_P0019030 protein_coding protein_coding MGP_BALBcJ_T0019031.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19433052 19934591 - MGP_BALBcJ_P0019031 protein_coding protein_coding MGP_BALBcJ_T0019032.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19433716 19463906 - MGP_BALBcJ_P0019032 protein_coding protein_coding MGP_BALBcJ_T0019033.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19435223 19934591 - MGP_BALBcJ_P0019033 protein_coding unknown_likely_coding MGP_BALBcJ_T0019034.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19435223 19588133 - MGP_BALBcJ_P0019034 protein_coding protein_coding MGP_BALBcJ_T0019035.1 MGP_BALBcJ_G0015819.1 mouse_genomes_project 1 19593159 19934591 - MGP_BALBcJ_P0019035 protein_coding protein_coding MGP_BALBcJ_T0023989.1 MGP_BALBcJ_G0016841.1 mouse_genomes_project 1 182920538 182940065 + MGP_BALBcJ_P0023989 Taf1a protein_coding protein_coding MGP_BALBcJ_T0023990.1 MGP_BALBcJ_G0016841.1 mouse_genomes_project 1 182920542 182937722 + MGP_BALBcJ_P0023990 Taf1a protein_coding protein_coding MGP_BALBcJ_T0023991.1 MGP_BALBcJ_G0016841.1 mouse_genomes_project 1 182920581 182940922 + MGP_BALBcJ_P0023991 Taf1a protein_coding unknown_likely_coding MGP_BALBcJ_T0023992.1 MGP_BALBcJ_G0016841.1 mouse_genomes_project 1 182939320 182940923 + MGP_BALBcJ_P0023992 Taf1a protein_coding protein_coding MGP_BALBcJ_T0022918.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096192 160112012 + MGP_BALBcJ_P0022918 Cenpl protein_coding protein_coding MGP_BALBcJ_T0022919.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096246 160111630 + MGP_BALBcJ_P0022919 Cenpl protein_coding protein_coding MGP_BALBcJ_T0022920.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096246 160111630 + MGP_BALBcJ_P0022920 Cenpl protein_coding protein_coding MGP_BALBcJ_T0022921.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096370 160111616 + MGP_BALBcJ_P0022921 Cenpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022922.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096428 160111616 + MGP_BALBcJ_P0022922 Cenpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022923.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096444 160112016 + MGP_BALBcJ_P0022923 Cenpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022924.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096463 160108783 + MGP_BALBcJ_P0022924 Cenpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022925.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160096494 160111630 + MGP_BALBcJ_P0022925 Cenpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022926.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160097884 160098484 + Cenpl protein_coding processed_transcript MGP_BALBcJ_T0022927.1 MGP_BALBcJ_G0016590.1 mouse_genomes_project 1 160101366 160108694 + Cenpl protein_coding processed_transcript MGP_BALBcJ_T0022612.1 MGP_BALBcJ_G0016538.1 mouse_genomes_project 1 152421323 152448808 + MGP_BALBcJ_P0022612 Shcbp1l protein_coding protein_coding MGP_BALBcJ_T0022613.1 MGP_BALBcJ_G0016538.1 mouse_genomes_project 1 152421333 152436101 + MGP_BALBcJ_P0022613 Shcbp1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022614.1 MGP_BALBcJ_G0016538.1 mouse_genomes_project 1 152441526 152445157 + Shcbp1l protein_coding retained_intron MGP_BALBcJ_T0023062.1 MGP_BALBcJ_G0016618.1 mouse_genomes_project 1 163004369 163007058 + MGP_BALBcJ_P0023062 Mettl18 protein_coding protein_coding MGP_BALBcJ_T0023063.1 MGP_BALBcJ_G0016618.1 mouse_genomes_project 1 163004369 163007058 + MGP_BALBcJ_P0023063 Mettl18 protein_coding protein_coding MGP_BALBcJ_T0002802.1 MGP_BALBcJ_G0002657.1 mouse_genomes_project 1 62071799 62083928 + Gm13748 antisense antisense MGP_BALBcJ_T0002982.1 MGP_BALBcJ_G0002794.1 mouse_genomes_project 1 191673813 191688596 + Gm10516 antisense antisense MGP_BALBcJ_T0002983.1 MGP_BALBcJ_G0002794.1 mouse_genomes_project 1 191674257 191682989 + Gm10516 antisense antisense MGP_BALBcJ_T0019982.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057647 57094802 - MGP_BALBcJ_P0019982 Mpp4 protein_coding protein_coding MGP_BALBcJ_T0019983.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057647 57097770 - MGP_BALBcJ_P0019983 Mpp4 protein_coding protein_coding MGP_BALBcJ_T0019984.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057647 57099537 - MGP_BALBcJ_P0019984 Mpp4 protein_coding protein_coding MGP_BALBcJ_T0019985.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057648 57097770 - MGP_BALBcJ_P0019985 Mpp4 protein_coding protein_coding MGP_BALBcJ_T0019986.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057652 57082351 - Mpp4 protein_coding processed_transcript MGP_BALBcJ_T0019987.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057856 57094795 - MGP_BALBcJ_P0019987 Mpp4 protein_coding protein_coding MGP_BALBcJ_T0019988.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57057965 57097701 - Mpp4 protein_coding retained_intron MGP_BALBcJ_T0019989.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57075832 57088904 - Mpp4 protein_coding retained_intron MGP_BALBcJ_T0019990.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57075834 57087195 - Mpp4 protein_coding retained_intron MGP_BALBcJ_T0019991.1 MGP_BALBcJ_G0016001.1 mouse_genomes_project 1 57084668 57097706 - Mpp4 protein_coding retained_intron MGP_BALBcJ_T0012008.1 MGP_BALBcJ_G0010105.1 mouse_genomes_project 1 48923858 48924883 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101827.1 MGP_BALBcJ_G0039756.1 mouse_genomes_project 1 56516639 56535416 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101828.1 MGP_BALBcJ_G0039756.1 mouse_genomes_project 1 56534535 56534665 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0098795.1 MGP_BALBcJ_G0036848.1 mouse_genomes_project 1 90202799 90204270 + Gm29101 sense_intronic sense_intronic MGP_BALBcJ_T0002974.1 MGP_BALBcJ_G0002791.1 mouse_genomes_project 1 191476330 191491561 - 1700034H15Rik antisense antisense MGP_BALBcJ_T0002975.1 MGP_BALBcJ_G0002791.1 mouse_genomes_project 1 191480442 191489800 - 1700034H15Rik antisense antisense MGP_BALBcJ_T0002976.1 MGP_BALBcJ_G0002791.1 mouse_genomes_project 1 191480444 191489927 - 1700034H15Rik antisense antisense MGP_BALBcJ_T0002977.1 MGP_BALBcJ_G0002791.1 mouse_genomes_project 1 191480633 191492394 - 1700034H15Rik antisense antisense MGP_BALBcJ_T0002978.1 MGP_BALBcJ_G0002791.1 mouse_genomes_project 1 191484697 191498177 - 1700034H15Rik antisense antisense MGP_BALBcJ_T0002979.1 MGP_BALBcJ_G0002791.1 mouse_genomes_project 1 191490644 191498185 - 1700034H15Rik antisense antisense MGP_BALBcJ_T0011772.1 MGP_BALBcJ_G0009895.1 mouse_genomes_project 1 173418681 173419731 + MGP_BALBcJ_P0011772 Olfr421-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0018663.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1532574 1538137 - MGP_BALBcJ_P0018663 Sox17 protein_coding protein_coding MGP_BALBcJ_T0018664.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1532893 1538481 - MGP_BALBcJ_P0018664 Sox17 protein_coding protein_coding MGP_BALBcJ_T0018665.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1533033 1539078 - MGP_BALBcJ_P0018665 Sox17 protein_coding protein_coding MGP_BALBcJ_T0018666.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1533356 1538087 - MGP_BALBcJ_P0018666 Sox17 protein_coding protein_coding MGP_BALBcJ_T0018667.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1534100 1535248 - Sox17 protein_coding retained_intron MGP_BALBcJ_T0018668.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1534101 1538054 - MGP_BALBcJ_P0018668 Sox17 protein_coding protein_coding MGP_BALBcJ_T0018669.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1534108 1535379 - MGP_BALBcJ_P0018669 Sox17 protein_coding protein_coding MGP_BALBcJ_T0018670.1 MGP_BALBcJ_G0015747.1 mouse_genomes_project 1 1534110 1538120 - MGP_BALBcJ_P0018670 Sox17 protein_coding protein_coding MGP_BALBcJ_T0012271.1 MGP_BALBcJ_G0010368.1 mouse_genomes_project 1 155190775 155190975 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000740.1 MGP_BALBcJ_G0000676.1 mouse_genomes_project 1 175684834 175688392 - TEC TEC MGP_BALBcJ_T0002828.1 MGP_BALBcJ_G0002675.1 mouse_genomes_project 1 85079988 85208918 - Gm28375 antisense antisense MGP_BALBcJ_T0021051.1 MGP_BALBcJ_G0016202.1 mouse_genomes_project 1 85541732 85550099 - MGP_BALBcJ_P0021051 Kcnj13 protein_coding protein_coding MGP_BALBcJ_T0021052.1 MGP_BALBcJ_G0016202.1 mouse_genomes_project 1 85542371 85544759 - MGP_BALBcJ_P0021052 Kcnj13 protein_coding protein_coding MGP_BALBcJ_T0005944.1 MGP_BALBcJ_G0004983.1 mouse_genomes_project 1 163472992 163474540 + Gm32391 lincRNA lincRNA MGP_BALBcJ_T0021880.1 MGP_BALBcJ_G0016386.1 mouse_genomes_project 1 129631439 129646766 + MGP_BALBcJ_P0021880 Fcmr protein_coding protein_coding MGP_BALBcJ_T0021881.1 MGP_BALBcJ_G0016386.1 mouse_genomes_project 1 129631550 129641191 + Fcmr protein_coding processed_transcript MGP_BALBcJ_T0021882.1 MGP_BALBcJ_G0016386.1 mouse_genomes_project 1 129644228 129646754 + Fcmr protein_coding processed_transcript MGP_BALBcJ_T0021883.1 MGP_BALBcJ_G0016386.1 mouse_genomes_project 1 129644401 129646765 + Fcmr protein_coding processed_transcript MGP_BALBcJ_T0098418.1 MGP_BALBcJ_G0036472.1 mouse_genomes_project 1 24138226 24138345 - n-R5s209 rRNA rRNA MGP_BALBcJ_T0023018.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161850725 161880793 - MGP_BALBcJ_P0023018 Fmo1 protein_coding protein_coding MGP_BALBcJ_T0023019.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161850931 161851639 - Fmo1 protein_coding processed_transcript MGP_BALBcJ_T0023020.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161851215 161855840 - Fmo1 protein_coding processed_transcript MGP_BALBcJ_T0023021.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161852741 161855840 - Fmo1 protein_coding retained_intron MGP_BALBcJ_T0023022.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161854977 161874107 - MGP_BALBcJ_P0023022 Fmo1 protein_coding protein_coding MGP_BALBcJ_T0023023.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161857436 161873965 - MGP_BALBcJ_P0023023 Fmo1 protein_coding protein_coding MGP_BALBcJ_T0023024.1 MGP_BALBcJ_G0016607.1 mouse_genomes_project 1 161857462 161873859 - MGP_BALBcJ_P0023024 Fmo1 protein_coding protein_coding MGP_BALBcJ_T0011853.1 MGP_BALBcJ_G0009950.1 mouse_genomes_project 1 4651348 4651634 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020983.1 MGP_BALBcJ_G0016185.1 mouse_genomes_project 1 84518960 84520878 - MGP_BALBcJ_P0020983 Nmur1 protein_coding protein_coding MGP_BALBcJ_T0021034.1 MGP_BALBcJ_G0016200.1 mouse_genomes_project 1 85418127 85465903 + MGP_BALBcJ_P0021034 Efhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021035.1 MGP_BALBcJ_G0016200.1 mouse_genomes_project 1 85418127 85465906 + MGP_BALBcJ_P0021035 Efhd1 protein_coding protein_coding MGP_BALBcJ_T0021036.1 MGP_BALBcJ_G0016200.1 mouse_genomes_project 1 85464292 85464809 + Efhd1 protein_coding processed_transcript MGP_BALBcJ_T0023069.1 MGP_BALBcJ_G0016621.1 mouse_genomes_project 1 163125940 163161145 + MGP_BALBcJ_P0023069 Selp protein_coding protein_coding MGP_BALBcJ_T0023070.1 MGP_BALBcJ_G0016621.1 mouse_genomes_project 1 163152245 163153720 + Selp protein_coding retained_intron MGP_BALBcJ_T0023071.1 MGP_BALBcJ_G0016621.1 mouse_genomes_project 1 163152804 163160184 + MGP_BALBcJ_P0023071 Selp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023072.1 MGP_BALBcJ_G0016621.1 mouse_genomes_project 1 163155629 163161130 + Selp protein_coding retained_intron MGP_BALBcJ_T0023073.1 MGP_BALBcJ_G0016621.1 mouse_genomes_project 1 163157676 163160197 + Selp protein_coding retained_intron MGP_BALBcJ_T0024003.1 MGP_BALBcJ_G0016846.1 mouse_genomes_project 1 184302696 184326519 - MGP_BALBcJ_P0024003 Marc1 protein_coding protein_coding MGP_BALBcJ_T0024004.1 MGP_BALBcJ_G0016846.1 mouse_genomes_project 1 184303638 184326335 - MGP_BALBcJ_P0024004 Marc1 protein_coding protein_coding MGP_BALBcJ_T0012213.1 MGP_BALBcJ_G0010310.1 mouse_genomes_project 1 130405019 130405816 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018887.1 MGP_BALBcJ_G0015781.1 mouse_genomes_project 1 10649998 10688678 - MGP_BALBcJ_P0018887 Lactb2 protein_coding protein_coding MGP_BALBcJ_T0018888.1 MGP_BALBcJ_G0015781.1 mouse_genomes_project 1 10657596 10666014 - Lactb2 protein_coding retained_intron MGP_BALBcJ_T0000573.1 MGP_BALBcJ_G0000511.1 mouse_genomes_project 1 104342070 104345430 - TEC TEC MGP_BALBcJ_T0012276.1 MGP_BALBcJ_G0010373.1 mouse_genomes_project 1 156597738 156597911 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019379.1 MGP_BALBcJ_G0015883.1 mouse_genomes_project 1 35200231 35210796 - MGP_BALBcJ_P0019379 Lyg2 protein_coding protein_coding MGP_BALBcJ_T0000580.1 MGP_BALBcJ_G0000518.1 mouse_genomes_project 1 110324651 110325170 + TEC TEC MGP_BALBcJ_T0012152.1 MGP_BALBcJ_G0010249.1 mouse_genomes_project 1 106459784 106460383 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018873.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10177011 10406649 - MGP_BALBcJ_P0018873 Ncoa2 protein_coding protein_coding MGP_BALBcJ_T0018874.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10177065 10408293 - MGP_BALBcJ_P0018874 Ncoa2 protein_coding protein_coding MGP_BALBcJ_T0018875.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10180384 10408293 - MGP_BALBcJ_P0018875 Ncoa2 protein_coding protein_coding MGP_BALBcJ_T0018876.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10183216 10184531 - Ncoa2 protein_coding processed_transcript MGP_BALBcJ_T0018877.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10184500 10186410 - Ncoa2 protein_coding retained_intron MGP_BALBcJ_T0018878.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10186331 10188908 - Ncoa2 protein_coding retained_intron MGP_BALBcJ_T0018879.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10203356 10408293 - Ncoa2 protein_coding retained_intron MGP_BALBcJ_T0018880.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10204783 10408239 - Ncoa2 protein_coding retained_intron MGP_BALBcJ_T0018881.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10222016 10406639 - Ncoa2 protein_coding retained_intron MGP_BALBcJ_T0018882.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10224349 10408239 - Ncoa2 protein_coding retained_intron MGP_BALBcJ_T0018883.1 MGP_BALBcJ_G0015779.1 mouse_genomes_project 1 10229848 10332153 - MGP_BALBcJ_P0018883 Ncoa2 protein_coding protein_coding MGP_BALBcJ_T0009458.1 MGP_BALBcJ_G0007583.1 mouse_genomes_project 1 41300941 41304101 - miRNA miRNA MGP_BALBcJ_T0012015.1 MGP_BALBcJ_G0010112.1 mouse_genomes_project 1 50467790 50468652 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019835.1 MGP_BALBcJ_G0015975.1 mouse_genomes_project 1 54499343 54500735 - MGP_BALBcJ_P0019835 Hsfy2 protein_coding protein_coding MGP_BALBcJ_T0023247.1 MGP_BALBcJ_G0016661.1 mouse_genomes_project 1 168645687 168686721 + MGP_BALBcJ_P0023247 Rgs5 protein_coding protein_coding MGP_BALBcJ_T0023248.1 MGP_BALBcJ_G0016661.1 mouse_genomes_project 1 168645708 168674125 + MGP_BALBcJ_P0023248 Rgs5 protein_coding protein_coding MGP_BALBcJ_T0011833.1 MGP_BALBcJ_G0009930.1 mouse_genomes_project 1 1731051 1732526 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012023.1 MGP_BALBcJ_G0010120.1 mouse_genomes_project 1 53199053 53199449 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012341.1 MGP_BALBcJ_G0010438.1 mouse_genomes_project 1 190577678 190577883 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020426.1 MGP_BALBcJ_G0016086.1 mouse_genomes_project 1 72402652 72409617 + MGP_BALBcJ_P0020426 Catip protein_coding protein_coding MGP_BALBcJ_T0020427.1 MGP_BALBcJ_G0016086.1 mouse_genomes_project 1 72402910 72408094 + MGP_BALBcJ_P0020427 Catip protein_coding protein_coding MGP_BALBcJ_T0020428.1 MGP_BALBcJ_G0016086.1 mouse_genomes_project 1 72402986 72409446 + MGP_BALBcJ_P0020428 Catip protein_coding protein_coding MGP_BALBcJ_T0020429.1 MGP_BALBcJ_G0016086.1 mouse_genomes_project 1 72405075 72407038 + Catip protein_coding retained_intron MGP_BALBcJ_T0022779.1 MGP_BALBcJ_G0016569.1 mouse_genomes_project 1 155647020 155686770 - MGP_BALBcJ_P0022779 Fam20b protein_coding protein_coding MGP_BALBcJ_T0022780.1 MGP_BALBcJ_G0016569.1 mouse_genomes_project 1 155647059 155686784 - MGP_BALBcJ_P0022780 Fam20b protein_coding protein_coding MGP_BALBcJ_T0022781.1 MGP_BALBcJ_G0016569.1 mouse_genomes_project 1 155654418 155666679 - Fam20b protein_coding retained_intron MGP_BALBcJ_T0022782.1 MGP_BALBcJ_G0016569.1 mouse_genomes_project 1 155666524 155671632 - Fam20b protein_coding processed_transcript MGP_BALBcJ_T0022783.1 MGP_BALBcJ_G0016569.1 mouse_genomes_project 1 155669461 155684656 - Fam20b protein_coding retained_intron MGP_BALBcJ_T0102086.1 MGP_BALBcJ_G0039903.1 mouse_genomes_project 1 133317383 133321515 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0019222.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592181 33603660 + MGP_BALBcJ_P0019222 Arid5a protein_coding protein_coding MGP_BALBcJ_T0019223.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33602745 + Arid5a protein_coding retained_intron MGP_BALBcJ_T0019224.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33604344 + Arid5a protein_coding retained_intron MGP_BALBcJ_T0019225.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33603671 + Arid5a protein_coding processed_transcript MGP_BALBcJ_T0019226.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33604985 + MGP_BALBcJ_P0019226 Arid5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019227.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33601899 + MGP_BALBcJ_P0019227 Arid5a protein_coding protein_coding MGP_BALBcJ_T0019228.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33604983 + MGP_BALBcJ_P0019228 Arid5a protein_coding protein_coding MGP_BALBcJ_T0019229.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33608486 + MGP_BALBcJ_P0019229 Arid5a protein_coding protein_coding MGP_BALBcJ_T0019230.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592202 33605528 + MGP_BALBcJ_P0019230 Arid5a protein_coding protein_coding MGP_BALBcJ_T0019231.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592206 33597220 + Arid5a protein_coding retained_intron MGP_BALBcJ_T0019232.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592227 33601035 + Arid5a protein_coding retained_intron MGP_BALBcJ_T0019233.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33592281 33604983 + MGP_BALBcJ_P0019233 Arid5a protein_coding protein_coding MGP_BALBcJ_T0019234.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33600448 33602593 + Arid5a protein_coding retained_intron MGP_BALBcJ_T0019235.1 MGP_BALBcJ_G0015858.1 mouse_genomes_project 1 33601483 33602589 + Arid5a protein_coding retained_intron MGP_BALBcJ_T0099094.1 MGP_BALBcJ_G0037130.1 mouse_genomes_project 1 64405093 64405244 + Gm25411 snRNA snRNA MGP_BALBcJ_T0012067.1 MGP_BALBcJ_G0010164.1 mouse_genomes_project 1 65566957 65568941 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005654.1 MGP_BALBcJ_G0004762.1 mouse_genomes_project 1 33159688 33160945 + 1110002O04Rik lincRNA lincRNA MGP_BALBcJ_T0099075.1 MGP_BALBcJ_G0037111.1 mouse_genomes_project 1 22631175 22631279 + Gm25294 snRNA snRNA MGP_BALBcJ_T0019802.1 MGP_BALBcJ_G0015967.1 mouse_genomes_project 1 52909850 52931710 + MGP_BALBcJ_P0019802 Coq10b protein_coding protein_coding MGP_BALBcJ_T0019803.1 MGP_BALBcJ_G0015967.1 mouse_genomes_project 1 52909850 52932459 + MGP_BALBcJ_P0019803 Coq10b protein_coding protein_coding MGP_BALBcJ_T0019804.1 MGP_BALBcJ_G0015967.1 mouse_genomes_project 1 52909949 52911172 + Coq10b protein_coding retained_intron MGP_BALBcJ_T0019805.1 MGP_BALBcJ_G0015967.1 mouse_genomes_project 1 52916676 52918784 + Coq10b protein_coding retained_intron MGP_BALBcJ_T0023585.1 MGP_BALBcJ_G0016744.1 mouse_genomes_project 1 172455562 172457429 - Ackr1 protein_coding processed_transcript MGP_BALBcJ_T0023586.1 MGP_BALBcJ_G0016744.1 mouse_genomes_project 1 172455566 172457181 - MGP_BALBcJ_P0023586 Ackr1 protein_coding protein_coding MGP_BALBcJ_T0023587.1 MGP_BALBcJ_G0016744.1 mouse_genomes_project 1 172455568 172457352 - MGP_BALBcJ_P0023587 Ackr1 protein_coding protein_coding MGP_BALBcJ_T0000435.1 MGP_BALBcJ_G0000373.1 mouse_genomes_project 1 31518671 31519918 - TEC TEC MGP_BALBcJ_T0023479.1 MGP_BALBcJ_G0016716.1 mouse_genomes_project 1 171180639 171197474 - MGP_BALBcJ_P0023479 Ncstn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023480.1 MGP_BALBcJ_G0016716.1 mouse_genomes_project 1 171180639 171197474 - MGP_BALBcJ_P0023480 Ncstn protein_coding protein_coding MGP_BALBcJ_T0023481.1 MGP_BALBcJ_G0016716.1 mouse_genomes_project 1 171180639 171197474 - MGP_BALBcJ_P0023481 Ncstn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023482.1 MGP_BALBcJ_G0016716.1 mouse_genomes_project 1 171181327 171182692 - Ncstn protein_coding retained_intron MGP_BALBcJ_T0023483.1 MGP_BALBcJ_G0016716.1 mouse_genomes_project 1 171182497 171185893 - Ncstn protein_coding retained_intron MGP_BALBcJ_T0023484.1 MGP_BALBcJ_G0016716.1 mouse_genomes_project 1 171195416 171197474 - Ncstn protein_coding retained_intron MGP_BALBcJ_T0000694.1 MGP_BALBcJ_G0000630.1 mouse_genomes_project 1 157371796 157374449 + TEC TEC MGP_BALBcJ_T0012336.1 MGP_BALBcJ_G0010433.1 mouse_genomes_project 1 186556286 186556884 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023567.1 MGP_BALBcJ_G0016733.1 mouse_genomes_project 1 171698141 171706904 - MGP_BALBcJ_P0023567 Slamf8 protein_coding protein_coding MGP_BALBcJ_T0023568.1 MGP_BALBcJ_G0016733.1 mouse_genomes_project 1 171705314 171706785 - Slamf8 protein_coding retained_intron MGP_BALBcJ_T0011927.1 MGP_BALBcJ_G0010024.1 mouse_genomes_project 1 28419759 28419985 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011887.1 MGP_BALBcJ_G0009984.1 mouse_genomes_project 1 14486752 14487238 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019426.1 MGP_BALBcJ_G0015892.1 mouse_genomes_project 1 36298164 36309933 + MGP_BALBcJ_P0019426 Pdcl3 protein_coding protein_coding MGP_BALBcJ_T0019427.1 MGP_BALBcJ_G0015892.1 mouse_genomes_project 1 36300392 36307613 + MGP_BALBcJ_P0019427 Pdcl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019428.1 MGP_BALBcJ_G0015892.1 mouse_genomes_project 1 36300416 36308503 + MGP_BALBcJ_P0019428 Pdcl3 protein_coding protein_coding MGP_BALBcJ_T0019429.1 MGP_BALBcJ_G0015892.1 mouse_genomes_project 1 36307855 36309341 + Pdcl3 protein_coding retained_intron MGP_BALBcJ_T0011834.1 MGP_BALBcJ_G0009931.1 mouse_genomes_project 1 1735341 1736547 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000652.1 MGP_BALBcJ_G0000588.1 mouse_genomes_project 1 137871550 137874367 + TEC TEC MGP_BALBcJ_T0019355.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35058607 35157041 - MGP_BALBcJ_P0019355 Tsga10 protein_coding protein_coding MGP_BALBcJ_T0019356.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35064649 35158391 - MGP_BALBcJ_P0019356 Tsga10 protein_coding protein_coding MGP_BALBcJ_T0019357.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35064649 35147336 - MGP_BALBcJ_P0019357 Tsga10 protein_coding protein_coding MGP_BALBcJ_T0019358.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35092744 35147309 - MGP_BALBcJ_P0019358 Tsga10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019359.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35124385 35156798 - MGP_BALBcJ_P0019359 Tsga10 protein_coding protein_coding MGP_BALBcJ_T0019360.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35125417 35157035 - MGP_BALBcJ_P0019360 Tsga10 protein_coding protein_coding MGP_BALBcJ_T0019361.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35126253 35157035 - MGP_BALBcJ_P0019361 Tsga10 protein_coding protein_coding MGP_BALBcJ_T0019362.1 MGP_BALBcJ_G0015879.1 mouse_genomes_project 1 35132021 35135681 - Tsga10 protein_coding retained_intron MGP_BALBcJ_T0022471.1 MGP_BALBcJ_G0016513.1 mouse_genomes_project 1 145370073 145790302 + MGP_BALBcJ_P0022471 Brinp3 protein_coding protein_coding MGP_BALBcJ_T0022472.1 MGP_BALBcJ_G0016513.1 mouse_genomes_project 1 145372927 145634742 + MGP_BALBcJ_P0022472 Brinp3 protein_coding protein_coding MGP_BALBcJ_T0022473.1 MGP_BALBcJ_G0016513.1 mouse_genomes_project 1 145373000 145790303 + MGP_BALBcJ_P0022473 Brinp3 protein_coding protein_coding MGP_BALBcJ_T0022474.1 MGP_BALBcJ_G0016513.1 mouse_genomes_project 1 145373017 145790297 + MGP_BALBcJ_P0022474 Brinp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022475.1 MGP_BALBcJ_G0016513.1 mouse_genomes_project 1 145373051 145393392 + Brinp3 protein_coding retained_intron MGP_BALBcJ_T0021348.1 MGP_BALBcJ_G0016269.1 mouse_genomes_project 1 91398458 91410284 + MGP_BALBcJ_P0021348 Aqp12 protein_coding protein_coding MGP_BALBcJ_T0021969.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130785487 130832905 - MGP_BALBcJ_P0021969 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021970.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130785930 130791501 - Mfsd4a protein_coding retained_intron MGP_BALBcJ_T0021971.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130789160 130832959 - MGP_BALBcJ_P0021971 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021972.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130789275 130832957 - MGP_BALBcJ_P0021972 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021973.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130789275 130832820 - MGP_BALBcJ_P0021973 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021974.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130789302 130833056 - MGP_BALBcJ_P0021974 Mfsd4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021975.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130799221 130832927 - MGP_BALBcJ_P0021975 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021976.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130800950 130832905 - MGP_BALBcJ_P0021976 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021977.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130801255 130804340 - Mfsd4a protein_coding processed_transcript MGP_BALBcJ_T0021978.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130801355 130832886 - MGP_BALBcJ_P0021978 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021979.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130801359 130832894 - MGP_BALBcJ_P0021979 Mfsd4a protein_coding protein_coding MGP_BALBcJ_T0021980.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130803086 130808983 - Mfsd4a protein_coding retained_intron MGP_BALBcJ_T0021981.1 MGP_BALBcJ_G0016408.1 mouse_genomes_project 1 130808860 130817341 - MGP_BALBcJ_P0021981 Mfsd4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100375.1 MGP_BALBcJ_G0038411.1 mouse_genomes_project 1 121223430 121223574 + Gm25771 snoRNA snoRNA MGP_BALBcJ_T0005981.1 MGP_BALBcJ_G0005015.1 mouse_genomes_project 1 180596465 180598884 + Gm37406 lincRNA lincRNA MGP_BALBcJ_T0005658.1 MGP_BALBcJ_G0004765.1 mouse_genomes_project 1 33289897 33290720 + 4930535G08Rik lincRNA lincRNA MGP_BALBcJ_T0012350.1 MGP_BALBcJ_G0010447.1 mouse_genomes_project 1 193023157 193024248 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100333.1 MGP_BALBcJ_G0038369.1 mouse_genomes_project 1 36842434 36842649 + Gm24826 snoRNA snoRNA MGP_BALBcJ_T0100339.1 MGP_BALBcJ_G0038375.1 mouse_genomes_project 1 49531787 49531909 - Gm27607 snoRNA snoRNA MGP_BALBcJ_T0012221.1 MGP_BALBcJ_G0010318.1 mouse_genomes_project 1 135653583 135653922 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098791.1 MGP_BALBcJ_G0036845.1 mouse_genomes_project 1 72335746 72338049 + Gm29358 sense_intronic sense_intronic MGP_BALBcJ_T0098792.1 MGP_BALBcJ_G0036845.1 mouse_genomes_project 1 72335784 72339011 + Gm29358 sense_intronic sense_intronic MGP_BALBcJ_T0000346.1 MGP_BALBcJ_G0000287.1 mouse_genomes_project 1 545335 547392 - TEC TEC MGP_BALBcJ_T0024137.1 MGP_BALBcJ_G0016871.1 mouse_genomes_project 1 190526412 190558897 - MGP_BALBcJ_P0024137 Vash2 protein_coding protein_coding MGP_BALBcJ_T0024138.1 MGP_BALBcJ_G0016871.1 mouse_genomes_project 1 190526414 190558603 - MGP_BALBcJ_P0024138 Vash2 protein_coding protein_coding MGP_BALBcJ_T0024139.1 MGP_BALBcJ_G0016871.1 mouse_genomes_project 1 190552502 190558815 - Vash2 protein_coding processed_transcript MGP_BALBcJ_T0098799.1 MGP_BALBcJ_G0036852.1 mouse_genomes_project 1 136777612 136778856 + Gm26930 sense_intronic sense_intronic MGP_BALBcJ_T0021266.1 MGP_BALBcJ_G0016249.1 mouse_genomes_project 1 89917705 89924071 + Asb1 protein_coding processed_transcript MGP_BALBcJ_T0021267.1 MGP_BALBcJ_G0016249.1 mouse_genomes_project 1 89917870 89931943 + MGP_BALBcJ_P0021267 Asb1 protein_coding protein_coding MGP_BALBcJ_T0021268.1 MGP_BALBcJ_G0016249.1 mouse_genomes_project 1 89917870 89931943 + MGP_BALBcJ_P0021268 Asb1 protein_coding protein_coding MGP_BALBcJ_T0021269.1 MGP_BALBcJ_G0016249.1 mouse_genomes_project 1 89917951 89936778 + MGP_BALBcJ_P0021269 Asb1 protein_coding protein_coding MGP_BALBcJ_T0021270.1 MGP_BALBcJ_G0016249.1 mouse_genomes_project 1 89918218 89929898 + MGP_BALBcJ_P0021270 Asb1 protein_coding protein_coding MGP_BALBcJ_T0021271.1 MGP_BALBcJ_G0016249.1 mouse_genomes_project 1 89918218 89932236 + MGP_BALBcJ_P0021271 Asb1 protein_coding protein_coding MGP_BALBcJ_T0012004.1 MGP_BALBcJ_G0010101.1 mouse_genomes_project 1 47143471 47143908 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002824.1 MGP_BALBcJ_G0002671.1 mouse_genomes_project 1 83218454 83218783 + antisense antisense MGP_BALBcJ_T0018965.1 MGP_BALBcJ_G0015798.1 mouse_genomes_project 1 14195030 14215085 + MGP_BALBcJ_P0018965 Gdap1 protein_coding protein_coding MGP_BALBcJ_T0018966.1 MGP_BALBcJ_G0015798.1 mouse_genomes_project 1 14195072 14209563 + Gdap1 protein_coding retained_intron MGP_BALBcJ_T0018967.1 MGP_BALBcJ_G0015798.1 mouse_genomes_project 1 14195136 14212445 + MGP_BALBcJ_P0018967 Gdap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018968.1 MGP_BALBcJ_G0015798.1 mouse_genomes_project 1 14209188 14212863 + Gdap1 protein_coding retained_intron MGP_BALBcJ_T0002956.1 MGP_BALBcJ_G0002775.1 mouse_genomes_project 1 184827381 184828999 + 2010103J01Rik antisense antisense MGP_BALBcJ_T0009484.1 MGP_BALBcJ_G0007609.1 mouse_genomes_project 1 82328505 82328618 - Mir6353 miRNA miRNA MGP_BALBcJ_T0002839.1 MGP_BALBcJ_G0002686.1 mouse_genomes_project 1 91705454 91716790 + Gm28535 antisense antisense MGP_BALBcJ_T0022425.1 MGP_BALBcJ_G0016503.1 mouse_genomes_project 1 142462589 142567567 - MGP_BALBcJ_P0022425 Cdc73 protein_coding protein_coding MGP_BALBcJ_T0022426.1 MGP_BALBcJ_G0016503.1 mouse_genomes_project 1 142469952 142504614 - Cdc73 protein_coding processed_transcript MGP_BALBcJ_T0022427.1 MGP_BALBcJ_G0016503.1 mouse_genomes_project 1 142497906 142500633 - Cdc73 protein_coding retained_intron MGP_BALBcJ_T0022428.1 MGP_BALBcJ_G0016503.1 mouse_genomes_project 1 142503502 142506558 - Cdc73 protein_coding retained_intron MGP_BALBcJ_T0005783.1 MGP_BALBcJ_G0004852.1 mouse_genomes_project 1 78480591 78511139 + 1700016L21Rik lincRNA lincRNA MGP_BALBcJ_T0005784.1 MGP_BALBcJ_G0004852.1 mouse_genomes_project 1 78480599 78515346 + 1700016L21Rik lincRNA lincRNA MGP_BALBcJ_T0016976.1 MGP_BALBcJ_G0015045.1 mouse_genomes_project 1 96476600 96481161 - B230216N24Rik processed_transcript retained_intron MGP_BALBcJ_T0016977.1 MGP_BALBcJ_G0015045.1 mouse_genomes_project 1 96476611 96492683 - B230216N24Rik processed_transcript sense_intronic MGP_BALBcJ_T0016978.1 MGP_BALBcJ_G0015045.1 mouse_genomes_project 1 96477201 96492717 - B230216N24Rik processed_transcript sense_intronic MGP_BALBcJ_T0016979.1 MGP_BALBcJ_G0015045.1 mouse_genomes_project 1 96477352 96504353 - B230216N24Rik processed_transcript sense_intronic MGP_BALBcJ_T0016980.1 MGP_BALBcJ_G0015045.1 mouse_genomes_project 1 96490740 96492678 - B230216N24Rik processed_transcript retained_intron MGP_BALBcJ_T0021944.1 MGP_BALBcJ_G0016402.1 mouse_genomes_project 1 130555791 130579921 + MGP_BALBcJ_P0021944 Pm20d1 protein_coding protein_coding MGP_BALBcJ_T0021945.1 MGP_BALBcJ_G0016402.1 mouse_genomes_project 1 130555808 130579934 + MGP_BALBcJ_P0021945 Pm20d1 protein_coding protein_coding MGP_BALBcJ_T0021946.1 MGP_BALBcJ_G0016402.1 mouse_genomes_project 1 130570578 130574845 + MGP_BALBcJ_P0021946 Pm20d1 protein_coding protein_coding MGP_BALBcJ_T0021947.1 MGP_BALBcJ_G0016402.1 mouse_genomes_project 1 130570616 130570854 + Pm20d1 protein_coding processed_transcript MGP_BALBcJ_T0005719.1 MGP_BALBcJ_G0004804.1 mouse_genomes_project 1 57421996 57426141 - Gm26813 lincRNA lincRNA MGP_BALBcJ_T0021256.1 MGP_BALBcJ_G0016246.1 mouse_genomes_project 1 89791627 89793367 - Hes6 protein_coding retained_intron MGP_BALBcJ_T0021257.1 MGP_BALBcJ_G0016246.1 mouse_genomes_project 1 89791627 89793353 - Hes6 protein_coding retained_intron MGP_BALBcJ_T0021258.1 MGP_BALBcJ_G0016246.1 mouse_genomes_project 1 89791627 89793367 - MGP_BALBcJ_P0021258 Hes6 protein_coding protein_coding MGP_BALBcJ_T0021259.1 MGP_BALBcJ_G0016246.1 mouse_genomes_project 1 89792431 89793353 - Hes6 protein_coding retained_intron MGP_BALBcJ_T0021260.1 MGP_BALBcJ_G0016246.1 mouse_genomes_project 1 89792492 89794183 - Hes6 protein_coding processed_transcript MGP_BALBcJ_T0099065.1 MGP_BALBcJ_G0037101.1 mouse_genomes_project 1 1571256 1571363 + Gm22307 snRNA snRNA MGP_BALBcJ_T0099101.1 MGP_BALBcJ_G0037137.1 mouse_genomes_project 1 70270415 70270606 + Gm24497 snRNA snRNA MGP_BALBcJ_T0099127.1 MGP_BALBcJ_G0037163.1 mouse_genomes_project 1 135554459 135554557 + Gm24086 snRNA snRNA MGP_BALBcJ_T0019267.1 MGP_BALBcJ_G0015865.1 mouse_genomes_project 1 33826459 33835194 - MGP_BALBcJ_P0019267 Ankrd39 protein_coding protein_coding MGP_BALBcJ_T0012270.1 MGP_BALBcJ_G0010367.1 mouse_genomes_project 1 154865835 154866141 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012167.1 MGP_BALBcJ_G0010264.1 mouse_genomes_project 1 110634854 110635519 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005872.1 MGP_BALBcJ_G0004925.1 mouse_genomes_project 1 128992517 129004014 - Gm16081 lincRNA lincRNA MGP_BALBcJ_T0020635.1 MGP_BALBcJ_G0016120.1 mouse_genomes_project 1 73230471 73247598 - MGP_BALBcJ_P0020635 Ptprn protein_coding protein_coding MGP_BALBcJ_T0020636.1 MGP_BALBcJ_G0016120.1 mouse_genomes_project 1 73240217 73241357 - Ptprn protein_coding retained_intron MGP_BALBcJ_T0020637.1 MGP_BALBcJ_G0016120.1 mouse_genomes_project 1 73241850 73247291 - MGP_BALBcJ_P0020637 Ptprn protein_coding protein_coding MGP_BALBcJ_T0020638.1 MGP_BALBcJ_G0016120.1 mouse_genomes_project 1 73241850 73247435 - MGP_BALBcJ_P0020638 Ptprn protein_coding protein_coding MGP_BALBcJ_T0020639.1 MGP_BALBcJ_G0016120.1 mouse_genomes_project 1 73241918 73247887 - MGP_BALBcJ_P0020639 Ptprn protein_coding protein_coding MGP_BALBcJ_T0020640.1 MGP_BALBcJ_G0016120.1 mouse_genomes_project 1 73241942 73247593 - Ptprn protein_coding processed_transcript MGP_BALBcJ_T0005932.1 MGP_BALBcJ_G0004974.1 mouse_genomes_project 1 158119195 158159573 + 4930562F17Rik lincRNA lincRNA MGP_BALBcJ_T0019372.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35183983 35192042 + MGP_BALBcJ_P0019372 Mrpl30 protein_coding protein_coding MGP_BALBcJ_T0019373.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35184038 35191871 + MGP_BALBcJ_P0019373 Mrpl30 protein_coding protein_coding MGP_BALBcJ_T0019374.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35184039 35186753 + Mrpl30 protein_coding retained_intron MGP_BALBcJ_T0019375.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35184049 35187491 + MGP_BALBcJ_P0019375 Mrpl30 protein_coding protein_coding MGP_BALBcJ_T0019376.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35186439 35191672 + MGP_BALBcJ_P0019376 Mrpl30 protein_coding protein_coding MGP_BALBcJ_T0019377.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35187441 35191845 + MGP_BALBcJ_P0019377 Mrpl30 protein_coding protein_coding MGP_BALBcJ_T0019378.1 MGP_BALBcJ_G0015882.1 mouse_genomes_project 1 35190762 35191632 + Mrpl30 protein_coding retained_intron MGP_BALBcJ_T0000562.1 MGP_BALBcJ_G0000500.1 mouse_genomes_project 1 93757154 93759692 + TEC TEC MGP_BALBcJ_T0012123.1 MGP_BALBcJ_G0010220.1 mouse_genomes_project 1 95085298 95086049 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023194.1 MGP_BALBcJ_G0016646.1 mouse_genomes_project 1 165377054 165391507 + MGP_BALBcJ_P0023194 Tada1 protein_coding protein_coding MGP_BALBcJ_T0023195.1 MGP_BALBcJ_G0016646.1 mouse_genomes_project 1 165377274 165386814 + Tada1 protein_coding retained_intron MGP_BALBcJ_T0023196.1 MGP_BALBcJ_G0016646.1 mouse_genomes_project 1 165377281 165382035 + Tada1 protein_coding retained_intron MGP_BALBcJ_T0023197.1 MGP_BALBcJ_G0016646.1 mouse_genomes_project 1 165377296 165380428 + MGP_BALBcJ_P0023197 Tada1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012197.1 MGP_BALBcJ_G0010294.1 mouse_genomes_project 1 121874855 121874972 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019825.1 MGP_BALBcJ_G0015972.1 mouse_genomes_project 1 53100819 53112115 + MGP_BALBcJ_P0019825 Mars2 protein_coding protein_coding MGP_BALBcJ_T0000772.1 MGP_BALBcJ_G0000706.1 mouse_genomes_project 1 183941669 183942424 + TEC TEC MGP_BALBcJ_T0021616.1 MGP_BALBcJ_G0016333.1 mouse_genomes_project 1 116943227 116957766 + MGP_BALBcJ_P0021616 Nifk protein_coding protein_coding MGP_BALBcJ_T0021617.1 MGP_BALBcJ_G0016333.1 mouse_genomes_project 1 116943242 116954936 + MGP_BALBcJ_P0021617 Nifk protein_coding protein_coding MGP_BALBcJ_T0021618.1 MGP_BALBcJ_G0016333.1 mouse_genomes_project 1 116943541 116951375 + MGP_BALBcJ_P0021618 Nifk protein_coding protein_coding MGP_BALBcJ_T0000721.1 MGP_BALBcJ_G0000657.1 mouse_genomes_project 1 163878563 163882084 - TEC TEC MGP_BALBcJ_T0098732.1 MGP_BALBcJ_G0036786.1 mouse_genomes_project 1 85936181 85936446 + Scarna6 scaRNA scaRNA MGP_BALBcJ_T0009477.1 MGP_BALBcJ_G0007602.1 mouse_genomes_project 1 72630959 72631036 - Gm25035 miRNA miRNA MGP_BALBcJ_T0000564.1 MGP_BALBcJ_G0000502.1 mouse_genomes_project 1 94168144 94170300 + TEC TEC MGP_BALBcJ_T0009539.1 MGP_BALBcJ_G0007664.1 mouse_genomes_project 1 191582001 191582082 - Mir3473c miRNA miRNA MGP_BALBcJ_T0011944.1 MGP_BALBcJ_G0010041.1 mouse_genomes_project 1 31785412 31785704 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022962.1 MGP_BALBcJ_G0016599.1 mouse_genomes_project 1 161017511 161021763 + MGP_BALBcJ_P0022962 Pigc protein_coding protein_coding MGP_BALBcJ_T0022963.1 MGP_BALBcJ_G0016599.1 mouse_genomes_project 1 161017513 161020657 + MGP_BALBcJ_P0022963 Pigc protein_coding protein_coding MGP_BALBcJ_T0022964.1 MGP_BALBcJ_G0016599.1 mouse_genomes_project 1 161017553 161021762 + MGP_BALBcJ_P0022964 Pigc protein_coding protein_coding MGP_BALBcJ_T0022965.1 MGP_BALBcJ_G0016599.1 mouse_genomes_project 1 161017624 161019198 + MGP_BALBcJ_P0022965 Pigc protein_coding protein_coding MGP_BALBcJ_T0022966.1 MGP_BALBcJ_G0016599.1 mouse_genomes_project 1 161017627 161018857 + MGP_BALBcJ_P0022966 Pigc protein_coding protein_coding MGP_BALBcJ_T0021579.1 MGP_BALBcJ_G0016321.1 mouse_genomes_project 1 105923663 105960250 + MGP_BALBcJ_P0021579 Serpinb7 protein_coding protein_coding MGP_BALBcJ_T0021580.1 MGP_BALBcJ_G0016321.1 mouse_genomes_project 1 105947176 105976413 + MGP_BALBcJ_P0021580 Serpinb7 protein_coding protein_coding MGP_BALBcJ_T0023593.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172474546 172616610 + MGP_BALBcJ_P0023593 Aim2 protein_coding protein_coding MGP_BALBcJ_T0023594.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172542787 172551352 + Aim2 protein_coding processed_transcript MGP_BALBcJ_T0023595.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172544199 172583256 + MGP_BALBcJ_P0023595 Aim2 protein_coding protein_coding MGP_BALBcJ_T0023596.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172578533 172579158 + MGP_BALBcJ_P0023596 Aim2 protein_coding protein_coding MGP_BALBcJ_T0023597.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172578916 172611025 + Aim2 protein_coding processed_transcript MGP_BALBcJ_T0023598.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172578916 172616602 + MGP_BALBcJ_P0023598 Aim2 protein_coding protein_coding MGP_BALBcJ_T0023599.1 MGP_BALBcJ_G0016746.1 mouse_genomes_project 1 172579050 172579728 + Aim2 protein_coding processed_transcript MGP_BALBcJ_T0012063.1 MGP_BALBcJ_G0010160.1 mouse_genomes_project 1 64013399 64013737 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002743.1 MGP_BALBcJ_G0002611.1 mouse_genomes_project 1 14730171 14773280 - Gm16070 antisense antisense MGP_BALBcJ_T0002744.1 MGP_BALBcJ_G0002611.1 mouse_genomes_project 1 14741133 14773642 - Gm16070 antisense antisense MGP_BALBcJ_T0002745.1 MGP_BALBcJ_G0002611.1 mouse_genomes_project 1 14770979 14773251 - Gm16070 antisense antisense MGP_BALBcJ_T0021917.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130062229 130296488 - MGP_BALBcJ_P0021917 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0021918.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130066341 130077585 - MGP_BALBcJ_P0021918 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0021919.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130071965 130108490 - Srgap2 protein_coding processed_transcript MGP_BALBcJ_T0021920.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130072196 130296488 - MGP_BALBcJ_P0021920 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0021921.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130072197 130081347 - Srgap2 protein_coding processed_transcript MGP_BALBcJ_T0021922.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130072199 130120382 - MGP_BALBcJ_P0021922 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0021923.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130072734 130073359 - Srgap2 protein_coding processed_transcript MGP_BALBcJ_T0021924.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130073619 130139957 - MGP_BALBcJ_P0021924 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0021925.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130089622 130107683 - Srgap2 protein_coding retained_intron MGP_BALBcJ_T0021926.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130137918 130296493 - Srgap2 protein_coding retained_intron MGP_BALBcJ_T0021927.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130180135 130282793 - MGP_BALBcJ_P0021927 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0021928.1 MGP_BALBcJ_G0016396.1 mouse_genomes_project 1 130204925 130272906 - MGP_BALBcJ_P0021928 Srgap2 protein_coding protein_coding MGP_BALBcJ_T0099108.1 MGP_BALBcJ_G0037144.1 mouse_genomes_project 1 91762544 91762647 + Gm26446 snRNA snRNA MGP_BALBcJ_T0023666.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175183610 175216606 + MGP_BALBcJ_P0023666 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023667.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175183823 175190612 + MGP_BALBcJ_P0023667 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023668.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175183825 175193855 + MGP_BALBcJ_P0023668 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023669.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175183842 175193877 + MGP_BALBcJ_P0023669 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023670.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175184208 175193873 + MGP_BALBcJ_P0023670 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023671.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175194674 175204137 + MGP_BALBcJ_P0023671 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023672.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175204587 175211838 + MGP_BALBcJ_P0023672 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023673.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175207409 175211655 + Exo1 protein_coding retained_intron MGP_BALBcJ_T0023674.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175207547 175209315 + MGP_BALBcJ_P0023674 Exo1 protein_coding protein_coding MGP_BALBcJ_T0023675.1 MGP_BALBcJ_G0016778.1 mouse_genomes_project 1 175210686 175211850 + Exo1 protein_coding processed_transcript MGP_BALBcJ_T0000596.1 MGP_BALBcJ_G0000534.1 mouse_genomes_project 1 123084215 123087879 - TEC TEC MGP_BALBcJ_T0005781.1 MGP_BALBcJ_G0004850.1 mouse_genomes_project 1 78256201 78260224 + 2310015K22Rik lincRNA lincRNA MGP_BALBcJ_T0023353.1 MGP_BALBcJ_G0016689.1 mouse_genomes_project 1 170293617 170298268 - MGP_BALBcJ_P0023353 Fcer1g protein_coding protein_coding MGP_BALBcJ_T0023354.1 MGP_BALBcJ_G0016689.1 mouse_genomes_project 1 170293625 170298210 - MGP_BALBcJ_P0023354 Fcer1g protein_coding protein_coding MGP_BALBcJ_T0023355.1 MGP_BALBcJ_G0016689.1 mouse_genomes_project 1 170295090 170298242 - Fcer1g protein_coding retained_intron MGP_BALBcJ_T0021427.1 MGP_BALBcJ_G0016284.1 mouse_genomes_project 1 92106067 92159162 - MGP_BALBcJ_P0021427 Thap4 protein_coding protein_coding MGP_BALBcJ_T0021428.1 MGP_BALBcJ_G0016284.1 mouse_genomes_project 1 92109537 92135919 - MGP_BALBcJ_P0021428 Thap4 protein_coding protein_coding MGP_BALBcJ_T0021429.1 MGP_BALBcJ_G0016284.1 mouse_genomes_project 1 92109540 92159246 - MGP_BALBcJ_P0021429 Thap4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021430.1 MGP_BALBcJ_G0016284.1 mouse_genomes_project 1 92109541 92119350 - MGP_BALBcJ_P0021430 Thap4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021431.1 MGP_BALBcJ_G0016284.1 mouse_genomes_project 1 92119147 92154042 - MGP_BALBcJ_P0021431 Thap4 protein_coding protein_coding MGP_BALBcJ_T0021432.1 MGP_BALBcJ_G0016284.1 mouse_genomes_project 1 92128606 92159032 - Thap4 protein_coding retained_intron MGP_BALBcJ_T0098297.1 MGP_BALBcJ_G0036351.1 mouse_genomes_project 1 118161781 118163581 + pseudogene pseudogene MGP_BALBcJ_T0002948.1 MGP_BALBcJ_G0002769.1 mouse_genomes_project 1 180250118 180262675 - Gm37768 antisense antisense MGP_BALBcJ_T0022928.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160114826 160161926 - Klhl20 protein_coding retained_intron MGP_BALBcJ_T0022929.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160114826 160161926 - MGP_BALBcJ_P0022929 Klhl20 protein_coding protein_coding MGP_BALBcJ_T0022930.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160114831 160161843 - MGP_BALBcJ_P0022930 Klhl20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022931.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160114849 160122143 - MGP_BALBcJ_P0022931 Klhl20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022932.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160122962 160161926 - Klhl20 protein_coding retained_intron MGP_BALBcJ_T0022933.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160127767 160131999 - Klhl20 protein_coding retained_intron MGP_BALBcJ_T0022934.1 MGP_BALBcJ_G0016591.1 mouse_genomes_project 1 160138749 160161857 - Klhl20 protein_coding retained_intron MGP_BALBcJ_T0098790.1 MGP_BALBcJ_G0036844.1 mouse_genomes_project 1 67656409 67658274 - Gm28112 sense_intronic sense_intronic MGP_BALBcJ_T0000446.1 MGP_BALBcJ_G0000384.1 mouse_genomes_project 1 36070718 36071223 + TEC TEC MGP_BALBcJ_T0023618.1 MGP_BALBcJ_G0016759.1 mouse_genomes_project 1 173322254 173323208 + MGP_BALBcJ_P0023618 Olfr430 protein_coding protein_coding MGP_BALBcJ_T0012242.1 MGP_BALBcJ_G0010339.1 mouse_genomes_project 1 144046024 144047020 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019631.1 MGP_BALBcJ_G0015938.1 mouse_genomes_project 1 43606593 44190060 + protein_coding processed_transcript MGP_BALBcJ_T0019632.1 MGP_BALBcJ_G0015938.1 mouse_genomes_project 1 43608020 44190133 + protein_coding processed_transcript MGP_BALBcJ_T0002815.1 MGP_BALBcJ_G0002663.1 mouse_genomes_project 1 72815893 72818356 - Gm29539 antisense antisense MGP_BALBcJ_T0000777.1 MGP_BALBcJ_G0000711.1 mouse_genomes_project 1 186265496 186267375 - TEC TEC MGP_BALBcJ_T0005740.1 MGP_BALBcJ_G0004822.1 mouse_genomes_project 1 65775870 65789136 + Gm15669 lincRNA lincRNA MGP_BALBcJ_T0002858.1 MGP_BALBcJ_G0002698.1 mouse_genomes_project 1 129187854 129204105 + Gm15674 antisense antisense MGP_BALBcJ_T0002951.1 MGP_BALBcJ_G0002771.1 mouse_genomes_project 1 180465674 180472502 - 2210411M09Rik antisense antisense MGP_BALBcJ_T0100331.1 MGP_BALBcJ_G0038367.1 mouse_genomes_project 1 32453732 32453861 - Gm25096 snoRNA snoRNA MGP_BALBcJ_T0011851.1 MGP_BALBcJ_G0009948.1 mouse_genomes_project 1 4348986 4349998 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005929.1 MGP_BALBcJ_G0004972.1 mouse_genomes_project 1 155945733 156028556 - Gm28694 lincRNA lincRNA MGP_BALBcJ_T0012112.1 MGP_BALBcJ_G0010209.1 mouse_genomes_project 1 87598949 87599749 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002905.1 MGP_BALBcJ_G0002735.1 mouse_genomes_project 1 159295804 159467911 + Gm36975 antisense antisense MGP_BALBcJ_T0019779.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52495886 52499156 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019780.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52495886 52774025 - MGP_BALBcJ_P0019780 Ankrd44 protein_coding protein_coding MGP_BALBcJ_T0019781.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52495888 52774025 - MGP_BALBcJ_P0019781 Ankrd44 protein_coding protein_coding MGP_BALBcJ_T0019782.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52499639 52508352 - MGP_BALBcJ_P0019782 Ankrd44 protein_coding protein_coding MGP_BALBcJ_T0019783.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52502211 52613836 - MGP_BALBcJ_P0019783 Ankrd44 protein_coding protein_coding MGP_BALBcJ_T0019784.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52505459 52541514 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019785.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52517855 52573256 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019786.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52572747 52574603 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019787.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52578862 52585498 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019788.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52585157 52773992 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019789.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52593150 52616530 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019790.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52610684 52618905 - Ankrd44 protein_coding processed_transcript MGP_BALBcJ_T0019791.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52611002 52774025 - Ankrd44 protein_coding retained_intron MGP_BALBcJ_T0019792.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52612479 52667682 - Ankrd44 protein_coding processed_transcript MGP_BALBcJ_T0019793.1 MGP_BALBcJ_G0015965.1 mouse_genomes_project 1 52616898 52738793 - MGP_BALBcJ_P0019793 Ankrd44 protein_coding protein_coding MGP_BALBcJ_T0023478.1 MGP_BALBcJ_G0016715.1 mouse_genomes_project 1 171166651 171172316 - MGP_BALBcJ_P0023478 Nhlh1 protein_coding protein_coding MGP_BALBcJ_T0012136.1 MGP_BALBcJ_G0010233.1 mouse_genomes_project 1 100189188 100189918 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002898.1 MGP_BALBcJ_G0002728.1 mouse_genomes_project 1 154224370 154226226 + Gm37622 antisense antisense MGP_BALBcJ_T0002924.1 MGP_BALBcJ_G0002749.1 mouse_genomes_project 1 165377796 165378451 - Gm15853 antisense antisense MGP_BALBcJ_T0012300.1 MGP_BALBcJ_G0010397.1 mouse_genomes_project 1 166283263 166283630 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000568.1 MGP_BALBcJ_G0000506.1 mouse_genomes_project 1 98273093 98275802 + TEC TEC MGP_BALBcJ_T0012139.1 MGP_BALBcJ_G0010236.1 mouse_genomes_project 1 102765163 102765470 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005830.1 MGP_BALBcJ_G0004893.1 mouse_genomes_project 1 99599540 99615106 + Gm20268 lincRNA lincRNA MGP_BALBcJ_T0000352.1 MGP_BALBcJ_G0000293.1 mouse_genomes_project 1 1951134 1952245 - TEC TEC MGP_BALBcJ_T0000354.1 MGP_BALBcJ_G0000295.1 mouse_genomes_project 1 2438839 2440872 + TEC TEC MGP_BALBcJ_T0020348.1 MGP_BALBcJ_G0016066.1 mouse_genomes_project 1 70183005 70238615 - MGP_BALBcJ_P0020348 Mreg protein_coding protein_coding MGP_BALBcJ_T0012073.1 MGP_BALBcJ_G0010170.1 mouse_genomes_project 1 69723698 69724049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002867.1 MGP_BALBcJ_G0002705.1 mouse_genomes_project 1 131157179 131158562 + Gm15849 antisense antisense MGP_BALBcJ_T0000730.1 MGP_BALBcJ_G0000666.1 mouse_genomes_project 1 167674234 167674845 - TEC TEC MGP_BALBcJ_T0018756.1 MGP_BALBcJ_G0015761.1 mouse_genomes_project 1 6589464 6591512 + MGP_BALBcJ_P0018756 Rrs1 protein_coding protein_coding MGP_BALBcJ_T0021699.1 MGP_BALBcJ_G0016347.1 mouse_genomes_project 1 118761398 118828384 + MGP_BALBcJ_P0021699 3110009E18Rik protein_coding protein_coding MGP_BALBcJ_T0021700.1 MGP_BALBcJ_G0016347.1 mouse_genomes_project 1 118761406 118828384 + MGP_BALBcJ_P0021700 3110009E18Rik protein_coding protein_coding MGP_BALBcJ_T0021701.1 MGP_BALBcJ_G0016347.1 mouse_genomes_project 1 118761411 118828384 + MGP_BALBcJ_P0021701 3110009E18Rik protein_coding protein_coding MGP_BALBcJ_T0021702.1 MGP_BALBcJ_G0016347.1 mouse_genomes_project 1 118790693 118806071 + 3110009E18Rik protein_coding processed_transcript MGP_BALBcJ_T0021703.1 MGP_BALBcJ_G0016347.1 mouse_genomes_project 1 118790765 118810121 + MGP_BALBcJ_P0021703 3110009E18Rik protein_coding protein_coding MGP_BALBcJ_T0021704.1 MGP_BALBcJ_G0016347.1 mouse_genomes_project 1 118800649 118814156 + 3110009E18Rik protein_coding processed_transcript MGP_BALBcJ_T0023823.1 MGP_BALBcJ_G0016805.1 mouse_genomes_project 1 179827223 179924043 + MGP_BALBcJ_P0023823 Itpkb protein_coding protein_coding MGP_BALBcJ_T0023824.1 MGP_BALBcJ_G0016805.1 mouse_genomes_project 1 179830604 179835197 + Itpkb protein_coding retained_intron MGP_BALBcJ_T0020659.1 MGP_BALBcJ_G0016123.1 mouse_genomes_project 1 73345089 73353340 + MGP_BALBcJ_P0020659 Des protein_coding protein_coding MGP_BALBcJ_T0020660.1 MGP_BALBcJ_G0016123.1 mouse_genomes_project 1 73346286 73347164 + Des protein_coding retained_intron MGP_BALBcJ_T0020661.1 MGP_BALBcJ_G0016123.1 mouse_genomes_project 1 73346790 73348399 + Des protein_coding retained_intron MGP_BALBcJ_T0023653.1 MGP_BALBcJ_G0016774.1 mouse_genomes_project 1 174931546 174971090 + MGP_BALBcJ_P0023653 Kmo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023654.1 MGP_BALBcJ_G0016774.1 mouse_genomes_project 1 174943154 174971981 + MGP_BALBcJ_P0023654 Kmo protein_coding protein_coding MGP_BALBcJ_T0023655.1 MGP_BALBcJ_G0016774.1 mouse_genomes_project 1 174943159 174965202 + Kmo protein_coding retained_intron MGP_BALBcJ_T0023656.1 MGP_BALBcJ_G0016774.1 mouse_genomes_project 1 174943184 174948497 + Kmo protein_coding processed_transcript MGP_BALBcJ_T0023657.1 MGP_BALBcJ_G0016774.1 mouse_genomes_project 1 174943338 174973195 + MGP_BALBcJ_P0023657 Kmo protein_coding protein_coding MGP_BALBcJ_T0023658.1 MGP_BALBcJ_G0016774.1 mouse_genomes_project 1 174943397 174960549 + Kmo protein_coding processed_transcript MGP_BALBcJ_T0005782.1 MGP_BALBcJ_G0004851.1 mouse_genomes_project 1 78416557 78419987 + Gm29125 lincRNA lincRNA MGP_BALBcJ_T0023751.1 MGP_BALBcJ_G0016796.1 mouse_genomes_project 1 179034997 179053172 - MGP_BALBcJ_P0023751 protein_coding protein_coding MGP_BALBcJ_T0018837.1 MGP_BALBcJ_G0015773.1 mouse_genomes_project 1 7388542 7794996 - MGP_BALBcJ_P0018837 Cpa6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018838.1 MGP_BALBcJ_G0015773.1 mouse_genomes_project 1 7388549 7794996 - MGP_BALBcJ_P0018838 Cpa6 protein_coding protein_coding MGP_BALBcJ_T0018839.1 MGP_BALBcJ_G0015773.1 mouse_genomes_project 1 7545161 7550168 - Cpa6 protein_coding retained_intron MGP_BALBcJ_T0018840.1 MGP_BALBcJ_G0015773.1 mouse_genomes_project 1 7668206 7794956 - Cpa6 protein_coding processed_transcript MGP_BALBcJ_T0012169.1 MGP_BALBcJ_G0010266.1 mouse_genomes_project 1 111359174 111361318 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100323.1 MGP_BALBcJ_G0038359.1 mouse_genomes_project 1 16036514 16036586 - Gm24075 snoRNA snoRNA MGP_BALBcJ_T0020158.1 MGP_BALBcJ_G0016030.1 mouse_genomes_project 1 61727018 61750837 + MGP_BALBcJ_P0020158 Fastkd2 protein_coding protein_coding MGP_BALBcJ_T0020159.1 MGP_BALBcJ_G0016030.1 mouse_genomes_project 1 61727045 61733718 + Fastkd2 protein_coding retained_intron MGP_BALBcJ_T0020160.1 MGP_BALBcJ_G0016030.1 mouse_genomes_project 1 61727047 61748720 + Fastkd2 protein_coding retained_intron MGP_BALBcJ_T0020161.1 MGP_BALBcJ_G0016030.1 mouse_genomes_project 1 61733584 61744239 + Fastkd2 protein_coding processed_transcript MGP_BALBcJ_T0020162.1 MGP_BALBcJ_G0016030.1 mouse_genomes_project 1 61744202 61746458 + Fastkd2 protein_coding retained_intron MGP_BALBcJ_T0020163.1 MGP_BALBcJ_G0016030.1 mouse_genomes_project 1 61747402 61748647 + Fastkd2 protein_coding processed_transcript MGP_BALBcJ_T0022080.1 MGP_BALBcJ_G0016429.1 mouse_genomes_project 1 132153252 132170016 + MGP_BALBcJ_P0022080 Etnk2 protein_coding protein_coding MGP_BALBcJ_T0022081.1 MGP_BALBcJ_G0016429.1 mouse_genomes_project 1 132153256 132164731 + Etnk2 protein_coding retained_intron MGP_BALBcJ_T0022082.1 MGP_BALBcJ_G0016429.1 mouse_genomes_project 1 132153528 132169069 + MGP_BALBcJ_P0022082 Etnk2 protein_coding protein_coding MGP_BALBcJ_T0022083.1 MGP_BALBcJ_G0016429.1 mouse_genomes_project 1 132155444 132158815 + Etnk2 protein_coding retained_intron MGP_BALBcJ_T0022084.1 MGP_BALBcJ_G0016429.1 mouse_genomes_project 1 132156967 132166660 + Etnk2 protein_coding processed_transcript MGP_BALBcJ_T0019515.1 MGP_BALBcJ_G0015914.1 mouse_genomes_project 1 40330914 40333198 + Gpr45 protein_coding processed_transcript MGP_BALBcJ_T0019516.1 MGP_BALBcJ_G0015914.1 mouse_genomes_project 1 40331005 40416218 + MGP_BALBcJ_P0019516 Gpr45 protein_coding protein_coding MGP_BALBcJ_T0019517.1 MGP_BALBcJ_G0015914.1 mouse_genomes_project 1 40331181 40411322 + Gpr45 protein_coding processed_transcript MGP_BALBcJ_T0019518.1 MGP_BALBcJ_G0015914.1 mouse_genomes_project 1 40331224 40331921 + Gpr45 protein_coding processed_transcript MGP_BALBcJ_T0019519.1 MGP_BALBcJ_G0015914.1 mouse_genomes_project 1 40412821 40414367 + MGP_BALBcJ_P0019519 Gpr45 protein_coding protein_coding MGP_BALBcJ_T0011845.1 MGP_BALBcJ_G0009942.1 mouse_genomes_project 1 3969730 3969760 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000731.1 MGP_BALBcJ_G0000667.1 mouse_genomes_project 1 170424913 170426170 + TEC TEC MGP_BALBcJ_T0021018.1 MGP_BALBcJ_G0016197.1 mouse_genomes_project 1 85338334 85339494 + Chrnd protein_coding retained_intron MGP_BALBcJ_T0021019.1 MGP_BALBcJ_G0016197.1 mouse_genomes_project 1 85338364 85351416 + MGP_BALBcJ_P0021019 Chrnd protein_coding protein_coding MGP_BALBcJ_T0021020.1 MGP_BALBcJ_G0016197.1 mouse_genomes_project 1 85338571 85351415 + MGP_BALBcJ_P0021020 Chrnd protein_coding protein_coding MGP_BALBcJ_T0099093.1 MGP_BALBcJ_G0037129.1 mouse_genomes_project 1 62988038 62988194 - Gm24788 snRNA snRNA MGP_BALBcJ_T0023588.1 MGP_BALBcJ_G0016745.1 mouse_genomes_project 1 172456934 172491369 - MGP_BALBcJ_P0023588 Cadm3 protein_coding protein_coding MGP_BALBcJ_T0023589.1 MGP_BALBcJ_G0016745.1 mouse_genomes_project 1 172459673 172491359 - MGP_BALBcJ_P0023589 Cadm3 protein_coding protein_coding MGP_BALBcJ_T0023590.1 MGP_BALBcJ_G0016745.1 mouse_genomes_project 1 172460525 172465616 - Cadm3 protein_coding retained_intron MGP_BALBcJ_T0023591.1 MGP_BALBcJ_G0016745.1 mouse_genomes_project 1 172466176 172491322 - Cadm3 protein_coding retained_intron MGP_BALBcJ_T0023592.1 MGP_BALBcJ_G0016745.1 mouse_genomes_project 1 172468572 172491307 - Cadm3 protein_coding retained_intron MGP_BALBcJ_T0012011.1 MGP_BALBcJ_G0010108.1 mouse_genomes_project 1 49882769 49884168 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023181.1 MGP_BALBcJ_G0016643.1 mouse_genomes_project 1 165135736 165176040 + MGP_BALBcJ_P0023181 Gpa33 protein_coding protein_coding MGP_BALBcJ_T0023182.1 MGP_BALBcJ_G0016643.1 mouse_genomes_project 1 165135838 165167060 + MGP_BALBcJ_P0023182 Gpa33 protein_coding protein_coding MGP_BALBcJ_T0023183.1 MGP_BALBcJ_G0016643.1 mouse_genomes_project 1 165135915 165163667 + Gpa33 protein_coding processed_transcript MGP_BALBcJ_T0023184.1 MGP_BALBcJ_G0016643.1 mouse_genomes_project 1 165135965 165176039 + MGP_BALBcJ_P0023184 Gpa33 protein_coding protein_coding MGP_BALBcJ_T0099134.1 MGP_BALBcJ_G0037170.1 mouse_genomes_project 1 143817176 143817282 - Gm22681 snRNA snRNA MGP_BALBcJ_T0002823.1 MGP_BALBcJ_G0002670.1 mouse_genomes_project 1 80429573 80432410 - antisense antisense MGP_BALBcJ_T0099139.1 MGP_BALBcJ_G0037175.1 mouse_genomes_project 1 162418192 162418300 + Gm24940 snRNA snRNA MGP_BALBcJ_T0005629.1 MGP_BALBcJ_G0004739.1 mouse_genomes_project 1 14176845 14181055 + Gm28783 lincRNA lincRNA MGP_BALBcJ_T0022636.1 MGP_BALBcJ_G0016542.1 mouse_genomes_project 1 152740044 152745205 + MGP_BALBcJ_P0022636 Rgs16 protein_coding protein_coding MGP_BALBcJ_T0019642.1 MGP_BALBcJ_G0015942.1 mouse_genomes_project 1 49065261 49077814 - MGP_BALBcJ_P0019642 Nabp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019643.1 MGP_BALBcJ_G0015942.1 mouse_genomes_project 1 49065406 49077481 - MGP_BALBcJ_P0019643 Nabp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019644.1 MGP_BALBcJ_G0015942.1 mouse_genomes_project 1 49069257 49077814 - MGP_BALBcJ_P0019644 Nabp1 protein_coding protein_coding MGP_BALBcJ_T0019645.1 MGP_BALBcJ_G0015942.1 mouse_genomes_project 1 49070645 49077329 - MGP_BALBcJ_P0019645 Nabp1 protein_coding protein_coding MGP_BALBcJ_T0019646.1 MGP_BALBcJ_G0015942.1 mouse_genomes_project 1 49070739 49072832 - Nabp1 protein_coding retained_intron MGP_BALBcJ_T0019647.1 MGP_BALBcJ_G0015942.1 mouse_genomes_project 1 49075005 49077814 - Nabp1 protein_coding retained_intron MGP_BALBcJ_T0023366.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338494 170345026 + MGP_BALBcJ_P0023366 B4galt3 protein_coding protein_coding MGP_BALBcJ_T0023367.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338505 170342445 + MGP_BALBcJ_P0023367 B4galt3 protein_coding protein_coding MGP_BALBcJ_T0023368.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338509 170345027 + MGP_BALBcJ_P0023368 B4galt3 protein_coding protein_coding MGP_BALBcJ_T0023369.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338509 170340096 + MGP_BALBcJ_P0023369 B4galt3 protein_coding protein_coding MGP_BALBcJ_T0023370.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338520 170340197 + B4galt3 protein_coding retained_intron MGP_BALBcJ_T0023371.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338531 170345026 + MGP_BALBcJ_P0023371 B4galt3 protein_coding protein_coding MGP_BALBcJ_T0023372.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338540 170345027 + B4galt3 protein_coding retained_intron MGP_BALBcJ_T0023373.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338574 170339526 + B4galt3 protein_coding processed_transcript MGP_BALBcJ_T0023374.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170338984 170339799 + B4galt3 protein_coding retained_intron MGP_BALBcJ_T0023375.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170339796 170340761 + MGP_BALBcJ_P0023375 B4galt3 protein_coding protein_coding MGP_BALBcJ_T0023376.1 MGP_BALBcJ_G0016692.1 mouse_genomes_project 1 170341672 170345025 + B4galt3 protein_coding retained_intron MGP_BALBcJ_T0102099.1 MGP_BALBcJ_G0039916.1 mouse_genomes_project 1 173304809 173305353 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005636.1 MGP_BALBcJ_G0004746.1 mouse_genomes_project 1 19123465 19126146 + Gm26580 lincRNA lincRNA MGP_BALBcJ_T0012253.1 MGP_BALBcJ_G0010350.1 mouse_genomes_project 1 148958622 148960689 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102071.1 MGP_BALBcJ_G0039888.1 mouse_genomes_project 1 90978240 90978352 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000540.1 MGP_BALBcJ_G0000478.1 mouse_genomes_project 1 84714251 84715426 + TEC TEC MGP_BALBcJ_T0018681.1 MGP_BALBcJ_G0015750.1 mouse_genomes_project 1 1850423 1932095 + MGP_BALBcJ_P0018681 Gm37988 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000407.1 MGP_BALBcJ_G0000346.1 mouse_genomes_project 1 22836565 22840561 - TEC TEC MGP_BALBcJ_T0020715.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73513818 73530332 + MGP_BALBcJ_P0020715 Stk11ip protein_coding protein_coding MGP_BALBcJ_T0020716.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73513841 73529774 + MGP_BALBcJ_P0020716 Stk11ip protein_coding protein_coding MGP_BALBcJ_T0020717.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73514080 73529777 + Stk11ip protein_coding retained_intron MGP_BALBcJ_T0020718.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73514100 73519829 + Stk11ip protein_coding retained_intron MGP_BALBcJ_T0020719.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73521021 73522200 + Stk11ip protein_coding retained_intron MGP_BALBcJ_T0020720.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73521356 73529777 + Stk11ip protein_coding retained_intron MGP_BALBcJ_T0020721.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73522390 73525052 + Stk11ip protein_coding retained_intron MGP_BALBcJ_T0020722.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73525245 73526968 + Stk11ip protein_coding retained_intron MGP_BALBcJ_T0020723.1 MGP_BALBcJ_G0016131.1 mouse_genomes_project 1 73525752 73526499 + Stk11ip protein_coding processed_transcript MGP_BALBcJ_T0022007.1 MGP_BALBcJ_G0016415.1 mouse_genomes_project 1 131193901 131243127 + MGP_BALBcJ_P0022007 Dstyk protein_coding protein_coding MGP_BALBcJ_T0022008.1 MGP_BALBcJ_G0016415.1 mouse_genomes_project 1 131193950 131240261 + MGP_BALBcJ_P0022008 Dstyk protein_coding protein_coding MGP_BALBcJ_T0022009.1 MGP_BALBcJ_G0016415.1 mouse_genomes_project 1 131194723 131210303 + Dstyk protein_coding processed_transcript MGP_BALBcJ_T0022010.1 MGP_BALBcJ_G0016415.1 mouse_genomes_project 1 131225607 131227827 + MGP_BALBcJ_P0022010 Dstyk protein_coding protein_coding MGP_BALBcJ_T0022011.1 MGP_BALBcJ_G0016415.1 mouse_genomes_project 1 131230805 131233856 + Dstyk protein_coding retained_intron MGP_BALBcJ_T0022012.1 MGP_BALBcJ_G0016415.1 mouse_genomes_project 1 131238577 131239525 + Dstyk protein_coding retained_intron MGP_BALBcJ_T0005760.1 MGP_BALBcJ_G0004835.1 mouse_genomes_project 1 71545295 71548824 - C530043A13Rik lincRNA lincRNA MGP_BALBcJ_T0005761.1 MGP_BALBcJ_G0004835.1 mouse_genomes_project 1 71545297 71548657 - C530043A13Rik lincRNA lincRNA MGP_BALBcJ_T0005762.1 MGP_BALBcJ_G0004835.1 mouse_genomes_project 1 71546397 71552987 - C530043A13Rik lincRNA lincRNA MGP_BALBcJ_T0002859.1 MGP_BALBcJ_G0002699.1 mouse_genomes_project 1 129230362 129333270 + antisense antisense MGP_BALBcJ_T0012085.1 MGP_BALBcJ_G0010182.1 mouse_genomes_project 1 77526584 77527943 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023413.1 MGP_BALBcJ_G0016697.1 mouse_genomes_project 1 170406519 170414187 - Nit1 protein_coding retained_intron MGP_BALBcJ_T0023414.1 MGP_BALBcJ_G0016697.1 mouse_genomes_project 1 170406519 170414334 - MGP_BALBcJ_P0023414 Nit1 protein_coding protein_coding MGP_BALBcJ_T0023415.1 MGP_BALBcJ_G0016697.1 mouse_genomes_project 1 170409078 170414352 - MGP_BALBcJ_P0023415 Nit1 protein_coding protein_coding MGP_BALBcJ_T0023416.1 MGP_BALBcJ_G0016697.1 mouse_genomes_project 1 170409836 170414346 - Nit1 protein_coding retained_intron MGP_BALBcJ_T0023417.1 MGP_BALBcJ_G0016697.1 mouse_genomes_project 1 170410747 170414351 - MGP_BALBcJ_P0023417 Nit1 protein_coding protein_coding MGP_BALBcJ_T0023418.1 MGP_BALBcJ_G0016697.1 mouse_genomes_project 1 170412280 170414331 - MGP_BALBcJ_P0023418 Nit1 protein_coding protein_coding MGP_BALBcJ_T0020082.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58438442 58523261 - MGP_BALBcJ_P0020082 Raph1 protein_coding protein_coding MGP_BALBcJ_T0020083.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58439336 58455708 - MGP_BALBcJ_P0020083 Raph1 protein_coding protein_coding MGP_BALBcJ_T0020084.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58439387 58523247 - MGP_BALBcJ_P0020084 Raph1 protein_coding protein_coding MGP_BALBcJ_T0020085.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58446825 58523251 - MGP_BALBcJ_P0020085 Raph1 protein_coding protein_coding MGP_BALBcJ_T0020086.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58449472 58452438 - Raph1 protein_coding retained_intron MGP_BALBcJ_T0020087.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58457760 58459423 - Raph1 protein_coding retained_intron MGP_BALBcJ_T0020088.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58469967 58478436 - Raph1 protein_coding retained_intron MGP_BALBcJ_T0020089.1 MGP_BALBcJ_G0016016.1 mouse_genomes_project 1 58482043 58523586 - MGP_BALBcJ_P0020089 Raph1 protein_coding protein_coding MGP_BALBcJ_T0021303.1 MGP_BALBcJ_G0016258.1 mouse_genomes_project 1 90979370 90980368 + MGP_BALBcJ_P0021303 Olfr1411 protein_coding protein_coding MGP_BALBcJ_T0011856.1 MGP_BALBcJ_G0009953.1 mouse_genomes_project 1 4787135 4788523 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020755.1 MGP_BALBcJ_G0016138.1 mouse_genomes_project 1 76545077 76562031 + MGP_BALBcJ_P0020755 Mogat1 protein_coding protein_coding MGP_BALBcJ_T0020756.1 MGP_BALBcJ_G0016138.1 mouse_genomes_project 1 76545246 76563571 + MGP_BALBcJ_P0020756 Mogat1 protein_coding protein_coding MGP_BALBcJ_T0020757.1 MGP_BALBcJ_G0016138.1 mouse_genomes_project 1 76545255 76573057 + MGP_BALBcJ_P0020757 Mogat1 protein_coding protein_coding MGP_BALBcJ_T0020758.1 MGP_BALBcJ_G0016138.1 mouse_genomes_project 1 76545900 76557191 + MGP_BALBcJ_P0020758 Mogat1 protein_coding protein_coding MGP_BALBcJ_T0020759.1 MGP_BALBcJ_G0016138.1 mouse_genomes_project 1 76545955 76573059 + MGP_BALBcJ_P0020759 Mogat1 protein_coding protein_coding MGP_BALBcJ_T0020760.1 MGP_BALBcJ_G0016138.1 mouse_genomes_project 1 76572513 76573059 + Mogat1 protein_coding processed_transcript MGP_BALBcJ_T0022760.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155389364 155439343 - MGP_BALBcJ_P0022760 Soat1 protein_coding protein_coding MGP_BALBcJ_T0022761.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155394592 155431976 - MGP_BALBcJ_P0022761 Soat1 protein_coding protein_coding MGP_BALBcJ_T0022762.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155395519 155397471 - Soat1 protein_coding retained_intron MGP_BALBcJ_T0022763.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155395770 155397917 - Soat1 protein_coding retained_intron MGP_BALBcJ_T0022764.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155405753 155439252 - Soat1 protein_coding retained_intron MGP_BALBcJ_T0022765.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155406179 155439308 - MGP_BALBcJ_P0022765 Soat1 protein_coding protein_coding MGP_BALBcJ_T0022766.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155411968 155439209 - Soat1 protein_coding retained_intron MGP_BALBcJ_T0022767.1 MGP_BALBcJ_G0016566.1 mouse_genomes_project 1 155412201 155439276 - MGP_BALBcJ_P0022767 Soat1 protein_coding protein_coding MGP_BALBcJ_T0012149.1 MGP_BALBcJ_G0010246.1 mouse_genomes_project 1 105339585 105341568 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100319.1 MGP_BALBcJ_G0038355.1 mouse_genomes_project 1 12057053 12057173 - Gm26345 snoRNA snoRNA MGP_BALBcJ_T0022986.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161601658 161631088 + MGP_BALBcJ_P0022986 Vamp4 protein_coding protein_coding MGP_BALBcJ_T0022987.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161601733 161626880 + MGP_BALBcJ_P0022987 Vamp4 protein_coding protein_coding MGP_BALBcJ_T0022988.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161601770 161613048 + Vamp4 protein_coding retained_intron MGP_BALBcJ_T0022989.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161601912 161626244 + MGP_BALBcJ_P0022989 Vamp4 protein_coding protein_coding MGP_BALBcJ_T0022990.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161601971 161631082 + MGP_BALBcJ_P0022990 Vamp4 protein_coding protein_coding MGP_BALBcJ_T0022991.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161601980 161626287 + MGP_BALBcJ_P0022991 Vamp4 protein_coding protein_coding MGP_BALBcJ_T0022992.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161602368 161626880 + MGP_BALBcJ_P0022992 Vamp4 protein_coding protein_coding MGP_BALBcJ_T0022993.1 MGP_BALBcJ_G0016602.1 mouse_genomes_project 1 161605962 161626268 + Vamp4 protein_coding processed_transcript MGP_BALBcJ_T0012260.1 MGP_BALBcJ_G0010357.1 mouse_genomes_project 1 151134312 151135117 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020924.1 MGP_BALBcJ_G0016173.1 mouse_genomes_project 1 83910484 83968845 + MGP_BALBcJ_P0020924 Cab39 protein_coding protein_coding MGP_BALBcJ_T0020925.1 MGP_BALBcJ_G0016173.1 mouse_genomes_project 1 83910584 83935608 + MGP_BALBcJ_P0020925 Cab39 protein_coding protein_coding MGP_BALBcJ_T0020926.1 MGP_BALBcJ_G0016173.1 mouse_genomes_project 1 83911511 83954595 + MGP_BALBcJ_P0020926 Cab39 protein_coding protein_coding MGP_BALBcJ_T0020927.1 MGP_BALBcJ_G0016173.1 mouse_genomes_project 1 83911554 83967634 + MGP_BALBcJ_P0020927 Cab39 protein_coding protein_coding MGP_BALBcJ_T0020928.1 MGP_BALBcJ_G0016173.1 mouse_genomes_project 1 83960356 83963347 + Cab39 protein_coding retained_intron MGP_BALBcJ_T0005724.1 MGP_BALBcJ_G0004809.1 mouse_genomes_project 1 59341442 59359780 + 9530026F06Rik lincRNA lincRNA MGP_BALBcJ_T0021750.1 MGP_BALBcJ_G0016358.1 mouse_genomes_project 1 124270204 124278188 + MGP_BALBcJ_P0021750 Slc35f5 protein_coding protein_coding MGP_BALBcJ_T0021751.1 MGP_BALBcJ_G0016358.1 mouse_genomes_project 1 124270625 124307517 + MGP_BALBcJ_P0021751 Slc35f5 protein_coding protein_coding MGP_BALBcJ_T0021752.1 MGP_BALBcJ_G0016358.1 mouse_genomes_project 1 124296249 124306845 + MGP_BALBcJ_P0021752 Slc35f5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012094.1 MGP_BALBcJ_G0010191.1 mouse_genomes_project 1 80923158 80923549 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002889.1 MGP_BALBcJ_G0002722.1 mouse_genomes_project 1 149255223 149278313 - 2310030A07Rik antisense antisense MGP_BALBcJ_T0020490.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72645495 72682402 + MGP_BALBcJ_P0020490 Stk36 protein_coding protein_coding MGP_BALBcJ_T0020491.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72645530 72682399 + Stk36 protein_coding retained_intron MGP_BALBcJ_T0020492.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72645553 72679608 + MGP_BALBcJ_P0020492 Stk36 protein_coding protein_coding MGP_BALBcJ_T0020493.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72645564 72650132 + MGP_BALBcJ_P0020493 Stk36 protein_coding protein_coding MGP_BALBcJ_T0020494.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72645689 72681551 + MGP_BALBcJ_P0020494 Stk36 protein_coding protein_coding MGP_BALBcJ_T0020495.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72647816 72653600 + MGP_BALBcJ_P0020495 Stk36 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020496.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72667854 72671413 + Stk36 protein_coding retained_intron MGP_BALBcJ_T0020497.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72668331 72681594 + Stk36 protein_coding processed_transcript MGP_BALBcJ_T0020498.1 MGP_BALBcJ_G0016096.1 mouse_genomes_project 1 72671966 72682402 + Stk36 protein_coding retained_intron MGP_BALBcJ_T0022935.1 MGP_BALBcJ_G0016592.1 mouse_genomes_project 1 160173484 160194232 + MGP_BALBcJ_P0022935 Ankrd45 protein_coding protein_coding MGP_BALBcJ_T0022936.1 MGP_BALBcJ_G0016592.1 mouse_genomes_project 1 160173505 160201093 + MGP_BALBcJ_P0022936 Ankrd45 protein_coding protein_coding MGP_BALBcJ_T0022937.1 MGP_BALBcJ_G0016592.1 mouse_genomes_project 1 160173516 160198553 + MGP_BALBcJ_P0022937 Ankrd45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022938.1 MGP_BALBcJ_G0016592.1 mouse_genomes_project 1 160173537 160195151 + MGP_BALBcJ_P0022938 Ankrd45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022939.1 MGP_BALBcJ_G0016592.1 mouse_genomes_project 1 160173564 160195128 + MGP_BALBcJ_P0022939 Ankrd45 protein_coding protein_coding MGP_BALBcJ_T0021853.1 MGP_BALBcJ_G0016378.1 mouse_genomes_project 1 129351150 129396746 - MGP_BALBcJ_P0021853 Zp3r protein_coding protein_coding MGP_BALBcJ_T0021854.1 MGP_BALBcJ_G0016378.1 mouse_genomes_project 1 129351150 129396746 - MGP_BALBcJ_P0021854 Zp3r protein_coding protein_coding MGP_BALBcJ_T0021855.1 MGP_BALBcJ_G0016378.1 mouse_genomes_project 1 129351153 129396737 - MGP_BALBcJ_P0021855 Zp3r protein_coding protein_coding MGP_BALBcJ_T0000657.1 MGP_BALBcJ_G0000593.1 mouse_genomes_project 1 140238509 140238998 + TEC TEC MGP_BALBcJ_T0000510.1 MGP_BALBcJ_G0000448.1 mouse_genomes_project 1 72327721 72328040 - TEC TEC MGP_BALBcJ_T0023827.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180072356 180082548 + MGP_BALBcJ_P0023827 Parp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023828.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180072361 180108494 + MGP_BALBcJ_P0023828 Parp1 protein_coding protein_coding MGP_BALBcJ_T0023829.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180072658 180081011 + MGP_BALBcJ_P0023829 Parp1 protein_coding protein_coding MGP_BALBcJ_T0023830.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180092853 180095037 + Parp1 protein_coding retained_intron MGP_BALBcJ_T0023831.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180094669 180096629 + Parp1 protein_coding retained_intron MGP_BALBcJ_T0023832.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180105464 180107436 + Parp1 protein_coding retained_intron MGP_BALBcJ_T0023833.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180106075 180107346 + Parp1 protein_coding retained_intron MGP_BALBcJ_T0023834.1 MGP_BALBcJ_G0016807.1 mouse_genomes_project 1 180106227 180108492 + MGP_BALBcJ_P0023834 Parp1 protein_coding protein_coding MGP_BALBcJ_T0020534.1 MGP_BALBcJ_G0016108.1 mouse_genomes_project 1 73109558 73117908 - MGP_BALBcJ_P0020534 Slc23a3 protein_coding protein_coding MGP_BALBcJ_T0020535.1 MGP_BALBcJ_G0016108.1 mouse_genomes_project 1 73115730 73117564 - Slc23a3 protein_coding retained_intron MGP_BALBcJ_T0019973.1 MGP_BALBcJ_G0015999.1 mouse_genomes_project 1 56983937 57031962 - MGP_BALBcJ_P0019973 Als2cr11 protein_coding protein_coding MGP_BALBcJ_T0019974.1 MGP_BALBcJ_G0015999.1 mouse_genomes_project 1 57003064 57021682 - Als2cr11 protein_coding processed_transcript MGP_BALBcJ_T0009527.1 MGP_BALBcJ_G0007652.1 mouse_genomes_project 1 168011208 168011324 - Mir6354 miRNA miRNA MGP_BALBcJ_T0012096.1 MGP_BALBcJ_G0010193.1 mouse_genomes_project 1 81136457 81137087 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016949.1 MGP_BALBcJ_G0015033.1 mouse_genomes_project 1 41750554 41752193 + Gm28893 processed_transcript processed_transcript MGP_BALBcJ_T0023894.1 MGP_BALBcJ_G0016822.1 mouse_genomes_project 1 180897333 181006170 + MGP_BALBcJ_P0023894 Cnih3 protein_coding protein_coding MGP_BALBcJ_T0023895.1 MGP_BALBcJ_G0016822.1 mouse_genomes_project 1 180897335 181006902 + MGP_BALBcJ_P0023895 Cnih3 protein_coding protein_coding MGP_BALBcJ_T0023896.1 MGP_BALBcJ_G0016822.1 mouse_genomes_project 1 180897903 181005548 + MGP_BALBcJ_P0023896 Cnih3 protein_coding protein_coding MGP_BALBcJ_T0020057.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58138760 58293671 + MGP_BALBcJ_P0020057 Nbeal1 protein_coding protein_coding MGP_BALBcJ_T0020058.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58138973 58144015 + Nbeal1 protein_coding retained_intron MGP_BALBcJ_T0020059.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58180101 58193788 + MGP_BALBcJ_P0020059 Nbeal1 protein_coding protein_coding MGP_BALBcJ_T0020060.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58185113 58187791 + Nbeal1 protein_coding retained_intron MGP_BALBcJ_T0020061.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58193690 58243161 + Nbeal1 protein_coding retained_intron MGP_BALBcJ_T0020062.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58221394 58282718 + MGP_BALBcJ_P0020062 Nbeal1 protein_coding protein_coding MGP_BALBcJ_T0020063.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58221402 58286777 + MGP_BALBcJ_P0020063 Nbeal1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020064.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58227237 58230455 + Nbeal1 protein_coding retained_intron MGP_BALBcJ_T0020065.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58239893 58253215 + MGP_BALBcJ_P0020065 Nbeal1 protein_coding protein_coding MGP_BALBcJ_T0020066.1 MGP_BALBcJ_G0016013.1 mouse_genomes_project 1 58245057 58247319 + Nbeal1 protein_coding retained_intron MGP_BALBcJ_T0012089.1 MGP_BALBcJ_G0010186.1 mouse_genomes_project 1 78977303 78977775 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009447.1 MGP_BALBcJ_G0007572.1 mouse_genomes_project 1 26640831 26640929 - Gm23785 miRNA miRNA MGP_BALBcJ_T0024171.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190936518 190979003 - MGP_BALBcJ_P0024171 Ppp2r5a protein_coding protein_coding MGP_BALBcJ_T0024172.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190940112 190941773 - Ppp2r5a protein_coding retained_intron MGP_BALBcJ_T0024173.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190941641 190970024 - Ppp2r5a protein_coding processed_transcript MGP_BALBcJ_T0024174.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190942267 190954024 - MGP_BALBcJ_P0024174 Ppp2r5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024175.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190947011 190954013 - Ppp2r5a protein_coding retained_intron MGP_BALBcJ_T0024176.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190957183 190981264 - Ppp2r5a protein_coding processed_transcript MGP_BALBcJ_T0024177.1 MGP_BALBcJ_G0016881.1 mouse_genomes_project 1 190980620 190985033 - Ppp2r5a protein_coding retained_intron MGP_BALBcJ_T0011890.1 MGP_BALBcJ_G0009987.1 mouse_genomes_project 1 15323988 15324973 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011956.1 MGP_BALBcJ_G0010053.1 mouse_genomes_project 1 33237705 33238609 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009451.1 MGP_BALBcJ_G0007576.1 mouse_genomes_project 1 31684924 31685003 - Mir5103 miRNA miRNA MGP_BALBcJ_T0099152.1 MGP_BALBcJ_G0037188.1 mouse_genomes_project 1 176001118 176001226 + Gm26104 snRNA snRNA MGP_BALBcJ_T0011900.1 MGP_BALBcJ_G0009997.1 mouse_genomes_project 1 18501317 18501533 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005916.1 MGP_BALBcJ_G0004963.1 mouse_genomes_project 1 152949495 152951560 + Gm29290 lincRNA lincRNA MGP_BALBcJ_T0100398.1 MGP_BALBcJ_G0038434.1 mouse_genomes_project 1 160062453 160062537 + Mir5117 snoRNA snoRNA MGP_BALBcJ_T0100349.1 MGP_BALBcJ_G0038385.1 mouse_genomes_project 1 61165225 61165303 + Gm26457 snoRNA snoRNA MGP_BALBcJ_T0002799.1 MGP_BALBcJ_G0002654.1 mouse_genomes_project 1 60103222 60108137 - Pard3bos2 antisense antisense MGP_BALBcJ_T0012125.1 MGP_BALBcJ_G0010222.1 mouse_genomes_project 1 96705201 96706185 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098419.1 MGP_BALBcJ_G0036473.1 mouse_genomes_project 1 28373635 28373773 - Gm27362 rRNA rRNA MGP_BALBcJ_T0021563.1 MGP_BALBcJ_G0016314.1 mouse_genomes_project 1 105313089 105335141 + MGP_BALBcJ_P0021563 Serpinb5 protein_coding protein_coding MGP_BALBcJ_T0021564.1 MGP_BALBcJ_G0016314.1 mouse_genomes_project 1 105313090 105332136 + MGP_BALBcJ_P0021564 Serpinb5 protein_coding protein_coding MGP_BALBcJ_T0021565.1 MGP_BALBcJ_G0016314.1 mouse_genomes_project 1 105313119 105335141 + MGP_BALBcJ_P0021565 Serpinb5 protein_coding protein_coding MGP_BALBcJ_T0021566.1 MGP_BALBcJ_G0016314.1 mouse_genomes_project 1 105322020 105335140 + MGP_BALBcJ_P0021566 Serpinb5 protein_coding protein_coding MGP_BALBcJ_T0005794.1 MGP_BALBcJ_G0004861.1 mouse_genomes_project 1 86793730 86799527 + Gm28888 lincRNA lincRNA MGP_BALBcJ_T0011916.1 MGP_BALBcJ_G0010013.1 mouse_genomes_project 1 23632400 23633051 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005766.1 MGP_BALBcJ_G0004838.1 mouse_genomes_project 1 71773874 71870541 - Gm29183 lincRNA lincRNA MGP_BALBcJ_T0009497.1 MGP_BALBcJ_G0007622.1 mouse_genomes_project 1 94743687 94743797 + Gm22917 miRNA miRNA MGP_BALBcJ_T0023325.1 MGP_BALBcJ_G0016683.1 mouse_genomes_project 1 170190012 170213852 - MGP_BALBcJ_P0023325 Sdhc protein_coding protein_coding MGP_BALBcJ_T0023326.1 MGP_BALBcJ_G0016683.1 mouse_genomes_project 1 170192254 170213840 - MGP_BALBcJ_P0023326 Sdhc protein_coding protein_coding MGP_BALBcJ_T0023327.1 MGP_BALBcJ_G0016683.1 mouse_genomes_project 1 170201572 170213837 - MGP_BALBcJ_P0023327 Sdhc protein_coding protein_coding MGP_BALBcJ_T0019049.1 MGP_BALBcJ_G0015824.1 mouse_genomes_project 1 21136526 21146217 - MGP_BALBcJ_P0019049 Sdhaf4 protein_coding protein_coding MGP_BALBcJ_T0019050.1 MGP_BALBcJ_G0015824.1 mouse_genomes_project 1 21143521 21146191 - Sdhaf4 protein_coding processed_transcript MGP_BALBcJ_T0000680.1 MGP_BALBcJ_G0000616.1 mouse_genomes_project 1 154785143 154785378 + TEC TEC MGP_BALBcJ_T0000555.1 MGP_BALBcJ_G0000493.1 mouse_genomes_project 1 88881965 88884758 + TEC TEC MGP_BALBcJ_T0102100.1 MGP_BALBcJ_G0039917.1 mouse_genomes_project 1 173347128 173347594 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0022624.1 MGP_BALBcJ_G0016540.1 mouse_genomes_project 1 152499091 152544998 - MGP_BALBcJ_P0022624 Npl protein_coding protein_coding MGP_BALBcJ_T0022625.1 MGP_BALBcJ_G0016540.1 mouse_genomes_project 1 152543374 152544664 - Npl protein_coding retained_intron MGP_BALBcJ_T0020353.1 MGP_BALBcJ_G0016068.1 mouse_genomes_project 1 70311657 70331743 + MGP_BALBcJ_P0020353 Tmem169 protein_coding protein_coding MGP_BALBcJ_T0020354.1 MGP_BALBcJ_G0016068.1 mouse_genomes_project 1 70311683 70329412 + MGP_BALBcJ_P0020354 Tmem169 protein_coding protein_coding MGP_BALBcJ_T0011915.1 MGP_BALBcJ_G0010012.1 mouse_genomes_project 1 23168778 23169334 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012118.1 MGP_BALBcJ_G0010215.1 mouse_genomes_project 1 91391520 91394896 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023205.1 MGP_BALBcJ_G0016649.1 mouse_genomes_project 1 165612960 165631460 - MGP_BALBcJ_P0023205 Gm4847 protein_coding protein_coding MGP_BALBcJ_T0020999.1 MGP_BALBcJ_G0016190.1 mouse_genomes_project 1 84803277 84807558 - MGP_BALBcJ_P0020999 Nppc protein_coding protein_coding MGP_BALBcJ_T0021824.1 MGP_BALBcJ_G0016370.1 mouse_genomes_project 1 126949972 126965417 + MGP_BALBcJ_P0021824 Ubxn4 protein_coding protein_coding MGP_BALBcJ_T0021825.1 MGP_BALBcJ_G0016370.1 mouse_genomes_project 1 126950170 126988597 + MGP_BALBcJ_P0021825 Ubxn4 protein_coding protein_coding MGP_BALBcJ_T0021826.1 MGP_BALBcJ_G0016370.1 mouse_genomes_project 1 126965385 126982385 + Ubxn4 protein_coding retained_intron MGP_BALBcJ_T0021827.1 MGP_BALBcJ_G0016370.1 mouse_genomes_project 1 126983845 126986239 + Ubxn4 protein_coding retained_intron MGP_BALBcJ_T0022021.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131288925 131302752 - MGP_BALBcJ_P0022021 Cntn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022022.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131288925 131295133 - MGP_BALBcJ_P0022022 Cntn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022023.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131291270 131322712 - Cntn2 protein_coding retained_intron MGP_BALBcJ_T0022024.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131291274 131322761 - MGP_BALBcJ_P0022024 Cntn2 protein_coding protein_coding MGP_BALBcJ_T0022025.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131291284 131322687 - Cntn2 protein_coding retained_intron MGP_BALBcJ_T0022026.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131296496 131298528 - Cntn2 protein_coding retained_intron MGP_BALBcJ_T0022027.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131308475 131313372 - MGP_BALBcJ_P0022027 Cntn2 protein_coding protein_coding MGP_BALBcJ_T0022028.1 MGP_BALBcJ_G0016418.1 mouse_genomes_project 1 131313144 131323078 - MGP_BALBcJ_P0022028 Cntn2 protein_coding protein_coding MGP_BALBcJ_T0012241.1 MGP_BALBcJ_G0010338.1 mouse_genomes_project 1 144028061 144029054 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012351.1 MGP_BALBcJ_G0010448.1 mouse_genomes_project 1 193421802 193422730 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020521.1 MGP_BALBcJ_G0016102.1 mouse_genomes_project 1 72899014 72901813 + MGP_BALBcJ_P0020521 Cdk5r2 protein_coding protein_coding MGP_BALBcJ_T0000343.1 MGP_BALBcJ_G0000284.1 mouse_genomes_project 1 386296 389115 - TEC TEC MGP_BALBcJ_T0017037.1 MGP_BALBcJ_G0015058.1 mouse_genomes_project 1 163867718 163877169 + Gm20743 processed_transcript lincRNA MGP_BALBcJ_T0017038.1 MGP_BALBcJ_G0015058.1 mouse_genomes_project 1 163867943 163936838 + Gm20743 processed_transcript antisense MGP_BALBcJ_T0100337.1 MGP_BALBcJ_G0038373.1 mouse_genomes_project 1 41290867 41290992 + Gm26352 snoRNA snoRNA MGP_BALBcJ_T0005650.1 MGP_BALBcJ_G0004759.1 mouse_genomes_project 1 31729032 31737441 - 4930568A12Rik lincRNA lincRNA MGP_BALBcJ_T0005651.1 MGP_BALBcJ_G0004759.1 mouse_genomes_project 1 31732847 31737763 - 4930568A12Rik lincRNA lincRNA MGP_BALBcJ_T0005715.1 MGP_BALBcJ_G0004802.1 mouse_genomes_project 1 56366339 56373802 + Gm15834 lincRNA lincRNA MGP_BALBcJ_T0005716.1 MGP_BALBcJ_G0004802.1 mouse_genomes_project 1 56366343 56378571 + Gm15834 lincRNA lincRNA MGP_BALBcJ_T0005717.1 MGP_BALBcJ_G0004802.1 mouse_genomes_project 1 56366346 56384270 + Gm15834 lincRNA lincRNA MGP_BALBcJ_T0005668.1 MGP_BALBcJ_G0004773.1 mouse_genomes_project 1 38887314 38890097 - Gm28634 lincRNA lincRNA MGP_BALBcJ_T0022429.1 MGP_BALBcJ_G0016504.1 mouse_genomes_project 1 142504696 142518958 + MGP_BALBcJ_P0022429 B3galt2 protein_coding protein_coding MGP_BALBcJ_T0021996.1 MGP_BALBcJ_G0016411.1 mouse_genomes_project 1 130999584 131000304 - MGP_BALBcJ_P0021996 Gm10188 protein_coding protein_coding MGP_BALBcJ_T0099144.1 MGP_BALBcJ_G0037180.1 mouse_genomes_project 1 169839126 169839233 - Gm25235 snRNA snRNA MGP_BALBcJ_T0012275.1 MGP_BALBcJ_G0010372.1 mouse_genomes_project 1 156597059 156597257 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012205.1 MGP_BALBcJ_G0010302.1 mouse_genomes_project 1 126834784 126835264 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022797.1 MGP_BALBcJ_G0016571.1 mouse_genomes_project 1 155807955 155828107 + MGP_BALBcJ_P0022797 Angptl1 protein_coding protein_coding MGP_BALBcJ_T0022798.1 MGP_BALBcJ_G0016571.1 mouse_genomes_project 1 155808351 155814991 + MGP_BALBcJ_P0022798 Angptl1 protein_coding protein_coding MGP_BALBcJ_T0022069.1 MGP_BALBcJ_G0016425.1 mouse_genomes_project 1 132098140 132111242 + MGP_BALBcJ_P0022069 Golt1a protein_coding protein_coding MGP_BALBcJ_T0022074.1 MGP_BALBcJ_G0016425.1 mouse_genomes_project 1 132098230 132109266 + MGP_BALBcJ_P0022074 Golt1a protein_coding protein_coding MGP_BALBcJ_T0005800.1 MGP_BALBcJ_G0004866.1 mouse_genomes_project 1 87353699 87359797 + 1700067G17Rik lincRNA lincRNA MGP_BALBcJ_T0022707.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154772043 154775437 - Qsox1 protein_coding retained_intron MGP_BALBcJ_T0022708.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154774172 154809593 - MGP_BALBcJ_P0022708 Qsox1 protein_coding protein_coding MGP_BALBcJ_T0022709.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154774173 154809555 - MGP_BALBcJ_P0022709 Qsox1 protein_coding protein_coding MGP_BALBcJ_T0022710.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154774176 154809548 - MGP_BALBcJ_P0022710 Qsox1 protein_coding protein_coding MGP_BALBcJ_T0022711.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154775932 154778008 - Qsox1 protein_coding processed_transcript MGP_BALBcJ_T0022712.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154790175 154809524 - Qsox1 protein_coding retained_intron MGP_BALBcJ_T0022713.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154790349 154791424 - Qsox1 protein_coding retained_intron MGP_BALBcJ_T0022714.1 MGP_BALBcJ_G0016558.1 mouse_genomes_project 1 154797830 154809542 - Qsox1 protein_coding retained_intron MGP_BALBcJ_T0000601.1 MGP_BALBcJ_G0000539.1 mouse_genomes_project 1 125962231 125963625 + TEC TEC MGP_BALBcJ_T0002966.1 MGP_BALBcJ_G0002784.1 mouse_genomes_project 1 189386658 189390147 - Gm26574 antisense antisense MGP_BALBcJ_T0024291.1 MGP_BALBcJ_G0016901.1 mouse_genomes_project 1 192894066 192919250 - MGP_BALBcJ_P0024291 Camk1g protein_coding protein_coding MGP_BALBcJ_T0024292.1 MGP_BALBcJ_G0016901.1 mouse_genomes_project 1 192894066 192919177 - MGP_BALBcJ_P0024292 Camk1g protein_coding protein_coding MGP_BALBcJ_T0024293.1 MGP_BALBcJ_G0016901.1 mouse_genomes_project 1 192896486 192907568 - MGP_BALBcJ_P0024293 Camk1g protein_coding protein_coding MGP_BALBcJ_T0024294.1 MGP_BALBcJ_G0016901.1 mouse_genomes_project 1 192902578 192919197 - Camk1g protein_coding retained_intron MGP_BALBcJ_T0021557.1 MGP_BALBcJ_G0016313.1 mouse_genomes_project 1 105223305 105255970 - MGP_BALBcJ_P0021557 Vps4b protein_coding protein_coding MGP_BALBcJ_T0021558.1 MGP_BALBcJ_G0016313.1 mouse_genomes_project 1 105228676 105256031 - MGP_BALBcJ_P0021558 Vps4b protein_coding protein_coding MGP_BALBcJ_T0021559.1 MGP_BALBcJ_G0016313.1 mouse_genomes_project 1 105236545 105242038 - Vps4b protein_coding retained_intron MGP_BALBcJ_T0021560.1 MGP_BALBcJ_G0016313.1 mouse_genomes_project 1 105238688 105239868 - Vps4b protein_coding retained_intron MGP_BALBcJ_T0021561.1 MGP_BALBcJ_G0016313.1 mouse_genomes_project 1 105245045 105249190 - Vps4b protein_coding processed_transcript MGP_BALBcJ_T0021562.1 MGP_BALBcJ_G0016313.1 mouse_genomes_project 1 105250340 105255880 - Vps4b protein_coding retained_intron MGP_BALBcJ_T0023095.1 MGP_BALBcJ_G0016627.1 mouse_genomes_project 1 163447296 163468910 - MGP_BALBcJ_P0023095 Atp1b1 protein_coding protein_coding MGP_BALBcJ_T0023096.1 MGP_BALBcJ_G0016627.1 mouse_genomes_project 1 163451646 163453907 - Atp1b1 protein_coding processed_transcript MGP_BALBcJ_T0023097.1 MGP_BALBcJ_G0016627.1 mouse_genomes_project 1 163451646 163463997 - MGP_BALBcJ_P0023097 Atp1b1 protein_coding protein_coding MGP_BALBcJ_T0023098.1 MGP_BALBcJ_G0016627.1 mouse_genomes_project 1 163463481 163468577 - Atp1b1 protein_coding retained_intron MGP_BALBcJ_T0002934.1 MGP_BALBcJ_G0002756.1 mouse_genomes_project 1 170745306 170746457 + Gm37787 antisense antisense MGP_BALBcJ_T0020714.1 MGP_BALBcJ_G0016130.1 mouse_genomes_project 1 73494298 73497588 + MGP_BALBcJ_P0020714 Inha protein_coding protein_coding MGP_BALBcJ_T0000632.1 MGP_BALBcJ_G0000569.1 mouse_genomes_project 1 134298161 134299184 - TEC TEC MGP_BALBcJ_T0012296.1 MGP_BALBcJ_G0010393.1 mouse_genomes_project 1 165423915 165424086 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011902.1 MGP_BALBcJ_G0009999.1 mouse_genomes_project 1 18651839 18652869 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023449.1 MGP_BALBcJ_G0016707.1 mouse_genomes_project 1 170697481 170715807 - MGP_BALBcJ_P0023449 Ly9 protein_coding protein_coding MGP_BALBcJ_T0023450.1 MGP_BALBcJ_G0016707.1 mouse_genomes_project 1 170697490 170715755 - MGP_BALBcJ_P0023450 Ly9 protein_coding protein_coding MGP_BALBcJ_T0023451.1 MGP_BALBcJ_G0016707.1 mouse_genomes_project 1 170697506 170715731 - MGP_BALBcJ_P0023451 Ly9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023452.1 MGP_BALBcJ_G0016707.1 mouse_genomes_project 1 170699855 170715726 - MGP_BALBcJ_P0023452 Ly9 protein_coding protein_coding MGP_BALBcJ_T0023453.1 MGP_BALBcJ_G0016707.1 mouse_genomes_project 1 170709003 170715757 - Ly9 protein_coding retained_intron MGP_BALBcJ_T0020770.1 MGP_BALBcJ_G0016141.1 mouse_genomes_project 1 76867504 76870795 + MGP_BALBcJ_P0020770 Kcne4 protein_coding protein_coding MGP_BALBcJ_T0020771.1 MGP_BALBcJ_G0016141.1 mouse_genomes_project 1 76867673 76870795 + MGP_BALBcJ_P0020771 Kcne4 protein_coding protein_coding MGP_BALBcJ_T0024115.1 MGP_BALBcJ_G0016868.1 mouse_genomes_project 1 189678273 189731303 - MGP_BALBcJ_P0024115 Prox1 protein_coding protein_coding MGP_BALBcJ_T0024116.1 MGP_BALBcJ_G0016868.1 mouse_genomes_project 1 189682690 189729982 - MGP_BALBcJ_P0024116 Prox1 protein_coding protein_coding MGP_BALBcJ_T0024117.1 MGP_BALBcJ_G0016868.1 mouse_genomes_project 1 189683247 189731269 - MGP_BALBcJ_P0024117 Prox1 protein_coding protein_coding MGP_BALBcJ_T0098807.1 MGP_BALBcJ_G0036860.1 mouse_genomes_project 1 164234575 164239504 - Gm38190 sense_intronic sense_intronic MGP_BALBcJ_T0012215.1 MGP_BALBcJ_G0010312.1 mouse_genomes_project 1 132320915 132321707 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012331.1 MGP_BALBcJ_G0010428.1 mouse_genomes_project 1 182809047 182825130 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100401.1 MGP_BALBcJ_G0038437.1 mouse_genomes_project 1 160063189 160063266 + Snord47 snoRNA snoRNA MGP_BALBcJ_T0005739.1 MGP_BALBcJ_G0004821.1 mouse_genomes_project 1 65222200 65294029 + Gm15668 lincRNA lincRNA MGP_BALBcJ_T0019453.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37230784 37364259 + MGP_BALBcJ_P0019453 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019454.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37230784 37364259 + MGP_BALBcJ_P0019454 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019455.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231041 37232328 + Map4k4 protein_coding retained_intron MGP_BALBcJ_T0019456.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231041 37328165 + MGP_BALBcJ_P0019456 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019457.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231050 37362703 + MGP_BALBcJ_P0019457 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019458.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231050 37362703 + MGP_BALBcJ_P0019458 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019459.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231051 37362703 + MGP_BALBcJ_P0019459 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019460.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231095 37362918 + MGP_BALBcJ_P0019460 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019461.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37231101 37362874 + MGP_BALBcJ_P0019461 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019462.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37294157 37320217 + Map4k4 protein_coding processed_transcript MGP_BALBcJ_T0019463.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37294852 37313823 + Map4k4 protein_coding processed_transcript MGP_BALBcJ_T0019464.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37337543 37338510 + Map4k4 protein_coding retained_intron MGP_BALBcJ_T0019465.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37337841 37344691 + MGP_BALBcJ_P0019465 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019466.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37337842 37342859 + MGP_BALBcJ_P0019466 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019467.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37338625 37348606 + MGP_BALBcJ_P0019467 Map4k4 protein_coding protein_coding MGP_BALBcJ_T0019468.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37345341 37347278 + Map4k4 protein_coding retained_intron MGP_BALBcJ_T0019469.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37351800 37352647 + Map4k4 protein_coding retained_intron MGP_BALBcJ_T0019470.1 MGP_BALBcJ_G0015901.1 mouse_genomes_project 1 37361158 37362374 + Map4k4 protein_coding retained_intron MGP_BALBcJ_T0098808.1 MGP_BALBcJ_G0036861.1 mouse_genomes_project 1 164457023 164460098 - Gm37864 sense_intronic sense_intronic MGP_BALBcJ_T0098435.1 MGP_BALBcJ_G0036489.1 mouse_genomes_project 1 148781042 148781174 + n-R5s219 rRNA rRNA MGP_BALBcJ_T0016958.1 MGP_BALBcJ_G0015037.1 mouse_genomes_project 1 62670918 62681658 - 2810408I11Rik processed_transcript antisense MGP_BALBcJ_T0016959.1 MGP_BALBcJ_G0015037.1 mouse_genomes_project 1 62674364 62681607 - 2810408I11Rik processed_transcript antisense MGP_BALBcJ_T0016960.1 MGP_BALBcJ_G0015037.1 mouse_genomes_project 1 62680122 62681627 - 2810408I11Rik processed_transcript retained_intron MGP_BALBcJ_T0012022.1 MGP_BALBcJ_G0010119.1 mouse_genomes_project 1 53023250 53023875 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011964.1 MGP_BALBcJ_G0010061.1 mouse_genomes_project 1 37697376 37698061 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102075.1 MGP_BALBcJ_G0039892.1 mouse_genomes_project 1 101606843 101703049 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0020477.1 MGP_BALBcJ_G0016094.1 mouse_genomes_project 1 72632352 72636188 + MGP_BALBcJ_P0020477 Bcs1l protein_coding protein_coding MGP_BALBcJ_T0020478.1 MGP_BALBcJ_G0016094.1 mouse_genomes_project 1 72632363 72636519 + MGP_BALBcJ_P0020478 Bcs1l protein_coding protein_coding MGP_BALBcJ_T0020479.1 MGP_BALBcJ_G0016094.1 mouse_genomes_project 1 72632437 72636253 + MGP_BALBcJ_P0020479 Bcs1l protein_coding protein_coding MGP_BALBcJ_T0020480.1 MGP_BALBcJ_G0016094.1 mouse_genomes_project 1 72634329 72634972 + Bcs1l protein_coding retained_intron MGP_BALBcJ_T0000579.1 MGP_BALBcJ_G0000517.1 mouse_genomes_project 1 109440319 109443070 - TEC TEC MGP_BALBcJ_T0019085.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28062166 28131248 - MGP_BALBcJ_P0019085 Phf3 protein_coding protein_coding MGP_BALBcJ_T0019086.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28062169 28116894 - MGP_BALBcJ_P0019086 Phf3 protein_coding protein_coding MGP_BALBcJ_T0019087.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28063373 28070490 - MGP_BALBcJ_P0019087 Phf3 protein_coding protein_coding MGP_BALBcJ_T0019088.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28066032 28068871 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0019089.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28071681 28073313 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0019090.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28073348 28131358 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0019091.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28075092 28131584 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0019092.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28080004 28131467 - MGP_BALBcJ_P0019092 Phf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019093.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28080836 28083622 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0019094.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28084194 28116708 - Phf3 protein_coding processed_transcript MGP_BALBcJ_T0019095.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28089213 28090526 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0019096.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28090987 28131557 - MGP_BALBcJ_P0019096 Phf3 protein_coding protein_coding MGP_BALBcJ_T0019097.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28116707 28130915 - MGP_BALBcJ_P0019097 Phf3 protein_coding protein_coding MGP_BALBcJ_T0019098.1 MGP_BALBcJ_G0015832.1 mouse_genomes_project 1 28130314 28131138 - Phf3 protein_coding retained_intron MGP_BALBcJ_T0102077.1 MGP_BALBcJ_G0039894.1 mouse_genomes_project 1 103066937 103068297 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000621.1 MGP_BALBcJ_G0000559.1 mouse_genomes_project 1 130693660 130694167 - TEC TEC MGP_BALBcJ_T0012254.1 MGP_BALBcJ_G0010351.1 mouse_genomes_project 1 149085169 149085771 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099132.1 MGP_BALBcJ_G0037168.1 mouse_genomes_project 1 140178629 140178736 + Gm25457 snRNA snRNA MGP_BALBcJ_T0009542.1 MGP_BALBcJ_G0007667.1 mouse_genomes_project 1 194618917 194618998 + Mir29b-2 miRNA miRNA MGP_BALBcJ_T0100327.1 MGP_BALBcJ_G0038363.1 mouse_genomes_project 1 20377009 20377130 + Gm24176 snoRNA snoRNA MGP_BALBcJ_T0009534.1 MGP_BALBcJ_G0007659.1 mouse_genomes_project 1 184336202 184336284 - Mir1981 miRNA miRNA MGP_BALBcJ_T0006006.1 MGP_BALBcJ_G0005030.1 mouse_genomes_project 1 184113337 184135768 - Gm37800 lincRNA lincRNA MGP_BALBcJ_T0006007.1 MGP_BALBcJ_G0005030.1 mouse_genomes_project 1 184113975 184124268 - Gm37800 lincRNA lincRNA MGP_BALBcJ_T0012344.1 MGP_BALBcJ_G0010441.1 mouse_genomes_project 1 191067454 191067919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011841.1 MGP_BALBcJ_G0009938.1 mouse_genomes_project 1 3076769 3077852 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012290.1 MGP_BALBcJ_G0010387.1 mouse_genomes_project 1 164499131 164500711 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099142.1 MGP_BALBcJ_G0037178.1 mouse_genomes_project 1 168791381 168791488 - Gm22114 snRNA snRNA MGP_BALBcJ_T0099074.1 MGP_BALBcJ_G0037110.1 mouse_genomes_project 1 22441411 22441518 - Gm22260 snRNA snRNA MGP_BALBcJ_T0099120.1 MGP_BALBcJ_G0037156.1 mouse_genomes_project 1 127230468 127230573 - Gm25384 snRNA snRNA MGP_BALBcJ_T0021149.1 MGP_BALBcJ_G0016225.1 mouse_genomes_project 1 87010615 87039558 - MGP_BALBcJ_P0021149 Arl4c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021150.1 MGP_BALBcJ_G0016225.1 mouse_genomes_project 1 87010617 87039558 - MGP_BALBcJ_P0021150 Arl4c protein_coding protein_coding MGP_BALBcJ_T0021151.1 MGP_BALBcJ_G0016225.1 mouse_genomes_project 1 87035906 87039903 - MGP_BALBcJ_P0021151 Arl4c protein_coding protein_coding MGP_BALBcJ_T0022147.1 MGP_BALBcJ_G0016446.1 mouse_genomes_project 1 133095593 133142949 - MGP_BALBcJ_P0022147 Ppfia4 protein_coding unknown_likely_coding MGP_BALBcJ_T0022148.1 MGP_BALBcJ_G0016446.1 mouse_genomes_project 1 133095593 133125936 - MGP_BALBcJ_P0022148 Ppfia4 protein_coding protein_coding MGP_BALBcJ_T0022149.1 MGP_BALBcJ_G0016446.1 mouse_genomes_project 1 133095594 133103656 - Ppfia4 protein_coding processed_transcript MGP_BALBcJ_T0022150.1 MGP_BALBcJ_G0016446.1 mouse_genomes_project 1 133095598 133103618 - Ppfia4 protein_coding retained_intron MGP_BALBcJ_T0022151.1 MGP_BALBcJ_G0016446.1 mouse_genomes_project 1 133096310 133131596 - MGP_BALBcJ_P0022151 Ppfia4 protein_coding protein_coding MGP_BALBcJ_T0022152.1 MGP_BALBcJ_G0016446.1 mouse_genomes_project 1 133097190 133110397 - Ppfia4 protein_coding retained_intron MGP_BALBcJ_T0098786.1 MGP_BALBcJ_G0036840.1 mouse_genomes_project 1 49469496 49471995 - Gm28323 sense_intronic sense_intronic MGP_BALBcJ_T0019166.1 MGP_BALBcJ_G0015845.1 mouse_genomes_project 1 31688473 31691413 - MGP_BALBcJ_P0019166 Ccdc115 protein_coding protein_coding MGP_BALBcJ_T0019167.1 MGP_BALBcJ_G0015845.1 mouse_genomes_project 1 31688481 31690497 - Ccdc115 protein_coding retained_intron MGP_BALBcJ_T0019492.1 MGP_BALBcJ_G0015907.1 mouse_genomes_project 1 37863403 37900017 + MGP_BALBcJ_P0019492 Il18rap protein_coding protein_coding MGP_BALBcJ_T0019493.1 MGP_BALBcJ_G0015907.1 mouse_genomes_project 1 37863446 37887719 + Il18rap protein_coding retained_intron MGP_BALBcJ_T0019494.1 MGP_BALBcJ_G0015907.1 mouse_genomes_project 1 37863489 37874966 + Il18rap protein_coding retained_intron MGP_BALBcJ_T0019495.1 MGP_BALBcJ_G0015907.1 mouse_genomes_project 1 37889925 37896215 + Il18rap protein_coding retained_intron MGP_BALBcJ_T0020315.1 MGP_BALBcJ_G0016061.1 mouse_genomes_project 1 68730057 68892041 + MGP_BALBcJ_P0020315 Vwc2l protein_coding protein_coding MGP_BALBcJ_T0020316.1 MGP_BALBcJ_G0016061.1 mouse_genomes_project 1 68730094 68736545 + Vwc2l protein_coding retained_intron MGP_BALBcJ_T0020317.1 MGP_BALBcJ_G0016061.1 mouse_genomes_project 1 68730244 68892026 + MGP_BALBcJ_P0020317 Vwc2l protein_coding protein_coding MGP_BALBcJ_T0020318.1 MGP_BALBcJ_G0016061.1 mouse_genomes_project 1 68730265 68889133 + MGP_BALBcJ_P0020318 Vwc2l protein_coding protein_coding MGP_BALBcJ_T0000796.1 MGP_BALBcJ_G0000729.1 mouse_genomes_project 1 194213229 194215085 + TEC TEC MGP_BALBcJ_T0000393.1 MGP_BALBcJ_G0000334.1 mouse_genomes_project 1 20387506 20388229 - TEC TEC MGP_BALBcJ_T0000394.1 MGP_BALBcJ_G0000334.1 mouse_genomes_project 1 20387808 20388228 - TEC TEC MGP_BALBcJ_T0005801.1 MGP_BALBcJ_G0004867.1 mouse_genomes_project 1 87646900 87701313 - Gm28342 lincRNA lincRNA MGP_BALBcJ_T0021124.1 MGP_BALBcJ_G0016213.1 mouse_genomes_project 1 86299310 86472417 + MGP_BALBcJ_P0021124 Ugt1a8 protein_coding protein_coding MGP_BALBcJ_T0020093.1 MGP_BALBcJ_G0016018.1 mouse_genomes_project 1 58839380 58870441 + Ctla4 protein_coding processed_transcript MGP_BALBcJ_T0020094.1 MGP_BALBcJ_G0016018.1 mouse_genomes_project 1 58866752 58873540 + MGP_BALBcJ_P0020094 Ctla4 protein_coding protein_coding MGP_BALBcJ_T0020095.1 MGP_BALBcJ_G0016018.1 mouse_genomes_project 1 58866898 58872476 + MGP_BALBcJ_P0020095 Ctla4 protein_coding protein_coding MGP_BALBcJ_T0020977.1 MGP_BALBcJ_G0016184.1 mouse_genomes_project 1 84472587 84488681 - MGP_BALBcJ_P0020977 Ncl protein_coding protein_coding MGP_BALBcJ_T0020978.1 MGP_BALBcJ_G0016184.1 mouse_genomes_project 1 84478353 84488645 - Ncl protein_coding retained_intron MGP_BALBcJ_T0020979.1 MGP_BALBcJ_G0016184.1 mouse_genomes_project 1 84478354 84479256 - Ncl protein_coding retained_intron MGP_BALBcJ_T0020980.1 MGP_BALBcJ_G0016184.1 mouse_genomes_project 1 84478422 84480108 - Ncl protein_coding retained_intron MGP_BALBcJ_T0020981.1 MGP_BALBcJ_G0016184.1 mouse_genomes_project 1 84479145 84480351 - Ncl protein_coding retained_intron MGP_BALBcJ_T0020982.1 MGP_BALBcJ_G0016184.1 mouse_genomes_project 1 84485356 84488250 - MGP_BALBcJ_P0020982 Ncl protein_coding protein_coding MGP_BALBcJ_T0098782.1 MGP_BALBcJ_G0036836.1 mouse_genomes_project 1 34207497 34210430 - Gm38115 sense_intronic sense_intronic MGP_BALBcJ_T0020374.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71943215 72159704 - MGP_BALBcJ_P0020374 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020375.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71943216 72126794 - MGP_BALBcJ_P0020375 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020376.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71943216 72159706 - MGP_BALBcJ_P0020376 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020377.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71946895 71961497 - MGP_BALBcJ_P0020377 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020378.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71947077 72029035 - MGP_BALBcJ_P0020378 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020379.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71947101 72029035 - MGP_BALBcJ_P0020379 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020380.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71958113 71973897 - MGP_BALBcJ_P0020380 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020381.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71958400 71963795 - Tns1 protein_coding processed_transcript MGP_BALBcJ_T0020382.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71958400 71961201 - Tns1 protein_coding retained_intron MGP_BALBcJ_T0020383.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71958613 71963489 - Tns1 protein_coding processed_transcript MGP_BALBcJ_T0020384.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 71986254 71995925 - MGP_BALBcJ_P0020384 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020385.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72014584 72020939 - Tns1 protein_coding retained_intron MGP_BALBcJ_T0020386.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72023428 72032130 - Tns1 protein_coding retained_intron MGP_BALBcJ_T0020387.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72024080 72050336 - Tns1 protein_coding processed_transcript MGP_BALBcJ_T0020388.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72025806 72032130 - Tns1 protein_coding processed_transcript MGP_BALBcJ_T0020389.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72025911 72035208 - MGP_BALBcJ_P0020389 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020390.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72026869 72071040 - MGP_BALBcJ_P0020390 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020391.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72028472 72031358 - Tns1 protein_coding retained_intron MGP_BALBcJ_T0020392.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72028950 72132269 - MGP_BALBcJ_P0020392 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020393.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72030717 72132312 - MGP_BALBcJ_P0020393 Tns1 protein_coding protein_coding MGP_BALBcJ_T0020394.1 MGP_BALBcJ_G0016077.1 mouse_genomes_project 1 72035956 72071064 - Tns1 protein_coding processed_transcript MGP_BALBcJ_T0024184.1 MGP_BALBcJ_G0016883.1 mouse_genomes_project 1 191165973 191213187 + MGP_BALBcJ_P0024184 Ints7 protein_coding protein_coding MGP_BALBcJ_T0024185.1 MGP_BALBcJ_G0016883.1 mouse_genomes_project 1 191166063 191199055 + Ints7 protein_coding retained_intron MGP_BALBcJ_T0024186.1 MGP_BALBcJ_G0016883.1 mouse_genomes_project 1 191166078 191211136 + MGP_BALBcJ_P0024186 Ints7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024187.1 MGP_BALBcJ_G0016883.1 mouse_genomes_project 1 191166098 191197673 + MGP_BALBcJ_P0024187 Ints7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024188.1 MGP_BALBcJ_G0016883.1 mouse_genomes_project 1 191166098 191212245 + MGP_BALBcJ_P0024188 Ints7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024189.1 MGP_BALBcJ_G0016883.1 mouse_genomes_project 1 191166112 191174088 + Ints7 protein_coding retained_intron MGP_BALBcJ_T0012025.1 MGP_BALBcJ_G0010122.1 mouse_genomes_project 1 53241139 53242032 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012223.1 MGP_BALBcJ_G0010320.1 mouse_genomes_project 1 137029004 137029488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099155.1 MGP_BALBcJ_G0037191.1 mouse_genomes_project 1 180342930 180343038 + Gm24836 snRNA snRNA MGP_BALBcJ_T0099156.1 MGP_BALBcJ_G0037192.1 mouse_genomes_project 1 181367911 181368005 - Gm23690 snRNA snRNA MGP_BALBcJ_T0102103.1 MGP_BALBcJ_G0039920.1 mouse_genomes_project 1 173702443 173703542 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000752.1 MGP_BALBcJ_G0000688.1 mouse_genomes_project 1 177766337 177766931 - TEC TEC MGP_BALBcJ_T0000753.1 MGP_BALBcJ_G0000688.1 mouse_genomes_project 1 177766383 177766929 - TEC pseudogene MGP_BALBcJ_T0005773.1 MGP_BALBcJ_G0004844.1 mouse_genomes_project 1 75967397 75996441 - Gm28387 lincRNA lincRNA MGP_BALBcJ_T0012001.1 MGP_BALBcJ_G0010098.1 mouse_genomes_project 1 46778297 46779290 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005656.1 MGP_BALBcJ_G0004764.1 mouse_genomes_project 1 33281810 33289870 - Gm33222 lincRNA lincRNA MGP_BALBcJ_T0005657.1 MGP_BALBcJ_G0004764.1 mouse_genomes_project 1 33281893 33289816 - Gm33222 lincRNA lincRNA MGP_BALBcJ_T0011899.1 MGP_BALBcJ_G0009996.1 mouse_genomes_project 1 18478047 18501533 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018725.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3516875 3903965 + MGP_BALBcJ_P0018725 St18 protein_coding protein_coding MGP_BALBcJ_T0018726.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3516975 3903971 + MGP_BALBcJ_P0018726 St18 protein_coding protein_coding MGP_BALBcJ_T0018727.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3772193 3903971 + MGP_BALBcJ_P0018727 St18 protein_coding protein_coding MGP_BALBcJ_T0018728.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3772195 3838770 + MGP_BALBcJ_P0018728 St18 protein_coding protein_coding MGP_BALBcJ_T0018729.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3772212 3838895 + MGP_BALBcJ_P0018729 St18 protein_coding protein_coding MGP_BALBcJ_T0018730.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3772243 3902501 + MGP_BALBcJ_P0018730 St18 protein_coding protein_coding MGP_BALBcJ_T0018731.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3772244 3901844 + MGP_BALBcJ_P0018731 St18 protein_coding protein_coding MGP_BALBcJ_T0018732.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3777002 3846020 + MGP_BALBcJ_P0018732 St18 protein_coding protein_coding MGP_BALBcJ_T0018733.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3779699 3903971 + MGP_BALBcJ_P0018733 St18 protein_coding protein_coding MGP_BALBcJ_T0018734.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3846122 3852691 + MGP_BALBcJ_P0018734 St18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018735.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3859932 3875817 + St18 protein_coding processed_transcript MGP_BALBcJ_T0018736.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3870158 3892045 + St18 protein_coding processed_transcript MGP_BALBcJ_T0018737.1 MGP_BALBcJ_G0015758.1 mouse_genomes_project 1 3900371 3902635 + MGP_BALBcJ_P0018737 St18 protein_coding protein_coding MGP_BALBcJ_T0012110.1 MGP_BALBcJ_G0010207.1 mouse_genomes_project 1 87270991 87272246 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012045.1 MGP_BALBcJ_G0010142.1 mouse_genomes_project 1 59955815 59956093 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000761.1 MGP_BALBcJ_G0000696.1 mouse_genomes_project 1 180928079 180929390 + TEC TEC MGP_BALBcJ_T0000399.1 MGP_BALBcJ_G0000338.1 mouse_genomes_project 1 22445296 22446330 - TEC TEC MGP_BALBcJ_T0012027.1 MGP_BALBcJ_G0010124.1 mouse_genomes_project 1 55373295 55374176 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005866.1 MGP_BALBcJ_G0004920.1 mouse_genomes_project 1 120866625 120916629 + Gm28590 lincRNA lincRNA MGP_BALBcJ_T0012234.1 MGP_BALBcJ_G0010331.1 mouse_genomes_project 1 141386513 141387128 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020235.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64144366 64348782 + MGP_BALBcJ_P0020235 protein_coding protein_coding MGP_BALBcJ_T0020236.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64144406 64411040 + MGP_BALBcJ_P0020236 protein_coding protein_coding MGP_BALBcJ_T0020237.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64144409 64411595 + MGP_BALBcJ_P0020237 protein_coding protein_coding MGP_BALBcJ_T0020238.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64144564 64290243 + protein_coding processed_transcript MGP_BALBcJ_T0020239.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64144643 64164148 + protein_coding processed_transcript MGP_BALBcJ_T0020240.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64225819 64411593 + MGP_BALBcJ_P0020240 protein_coding protein_coding MGP_BALBcJ_T0020241.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64225834 64411593 + MGP_BALBcJ_P0020241 protein_coding protein_coding MGP_BALBcJ_T0020242.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64289522 64408200 + MGP_BALBcJ_P0020242 protein_coding protein_coding MGP_BALBcJ_T0020243.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64289639 64372452 + protein_coding retained_intron MGP_BALBcJ_T0020244.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64289801 64349456 + protein_coding retained_intron MGP_BALBcJ_T0020245.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64289905 64369807 + MGP_BALBcJ_P0020245 protein_coding protein_coding MGP_BALBcJ_T0020246.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64332820 64411595 + MGP_BALBcJ_P0020246 protein_coding protein_coding MGP_BALBcJ_T0020247.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64332823 64411595 + MGP_BALBcJ_P0020247 protein_coding protein_coding MGP_BALBcJ_T0020248.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64348676 64381722 + MGP_BALBcJ_P0020248 protein_coding protein_coding MGP_BALBcJ_T0020249.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64348866 64381251 + MGP_BALBcJ_P0020249 protein_coding protein_coding MGP_BALBcJ_T0020250.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64355109 64408968 + protein_coding processed_transcript MGP_BALBcJ_T0020251.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64355142 64382572 + MGP_BALBcJ_P0020251 protein_coding protein_coding MGP_BALBcJ_T0020252.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64355149 64376593 + protein_coding processed_transcript MGP_BALBcJ_T0020253.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64355175 64369896 + protein_coding retained_intron MGP_BALBcJ_T0020254.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64383581 64393735 + protein_coding processed_transcript MGP_BALBcJ_T0020255.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64384431 64407316 + MGP_BALBcJ_P0020255 protein_coding protein_coding MGP_BALBcJ_T0020256.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64384431 64407316 + MGP_BALBcJ_P0020256 protein_coding protein_coding MGP_BALBcJ_T0020257.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64385111 64407293 + MGP_BALBcJ_P0020257 protein_coding protein_coding MGP_BALBcJ_T0020258.1 MGP_BALBcJ_G0016050.1 mouse_genomes_project 1 64401805 64408465 + MGP_BALBcJ_P0020258 protein_coding protein_coding MGP_BALBcJ_T0011988.1 MGP_BALBcJ_G0010085.1 mouse_genomes_project 1 43292012 43292477 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012160.1 MGP_BALBcJ_G0010257.1 mouse_genomes_project 1 108933480 108934408 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002881.1 MGP_BALBcJ_G0002715.1 mouse_genomes_project 1 134953055 134956301 - Gm37759 antisense antisense MGP_BALBcJ_T0023640.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174378475 174803713 - MGP_BALBcJ_P0023640 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023641.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174378476 174803489 - MGP_BALBcJ_P0023641 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023642.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174378605 174803603 - MGP_BALBcJ_P0023642 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023643.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174379122 174802339 - MGP_BALBcJ_P0023643 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023644.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174379122 174405749 - MGP_BALBcJ_P0023644 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023645.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174379122 174405689 - MGP_BALBcJ_P0023645 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023646.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174379123 174398769 - MGP_BALBcJ_P0023646 Rgs7 protein_coding protein_coding MGP_BALBcJ_T0023647.1 MGP_BALBcJ_G0016772.1 mouse_genomes_project 1 174394657 174398289 - Rgs7 protein_coding retained_intron MGP_BALBcJ_T0100328.1 MGP_BALBcJ_G0038364.1 mouse_genomes_project 1 21701094 21701231 - Gm26418 snoRNA snoRNA MGP_BALBcJ_T0002742.1 MGP_BALBcJ_G0002610.1 mouse_genomes_project 1 14669872 14695934 - Gm28154 antisense antisense MGP_BALBcJ_T0021997.1 MGP_BALBcJ_G0016412.1 mouse_genomes_project 1 131075360 131084083 + MGP_BALBcJ_P0021997 Klhdc8a protein_coding protein_coding MGP_BALBcJ_T0009524.1 MGP_BALBcJ_G0007649.1 mouse_genomes_project 1 166277353 166277454 + Mir6347 miRNA miRNA MGP_BALBcJ_T0102057.1 MGP_BALBcJ_G0039874.1 mouse_genomes_project 1 63418015 63418695 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005876.1 MGP_BALBcJ_G0004929.1 mouse_genomes_project 1 130966586 130969321 - 1700037F24Rik lincRNA lincRNA MGP_BALBcJ_T0011830.1 MGP_BALBcJ_G0009927.1 mouse_genomes_project 1 1564821 1568971 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100334.1 MGP_BALBcJ_G0038370.1 mouse_genomes_project 1 36872130 36872240 - Snord89 snoRNA snoRNA MGP_BALBcJ_T0005847.1 MGP_BALBcJ_G0004907.1 mouse_genomes_project 1 117938940 117960920 - Gm29456 lincRNA lincRNA MGP_BALBcJ_T0020984.1 MGP_BALBcJ_G0016186.1 mouse_genomes_project 1 84559834 84561558 + MGP_BALBcJ_P0020984 1700019O17Rik protein_coding protein_coding MGP_BALBcJ_T0019168.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691591 31701090 + MGP_BALBcJ_P0019168 Imp4 protein_coding protein_coding MGP_BALBcJ_T0019169.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691638 31694299 + Imp4 protein_coding retained_intron MGP_BALBcJ_T0019170.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691645 31695590 + MGP_BALBcJ_P0019170 Imp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019171.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691645 31696121 + MGP_BALBcJ_P0019171 Imp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019172.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691677 31695761 + Imp4 protein_coding processed_transcript MGP_BALBcJ_T0019173.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691693 31695189 + Imp4 protein_coding processed_transcript MGP_BALBcJ_T0019174.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31691781 31696248 + MGP_BALBcJ_P0019174 Imp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019175.1 MGP_BALBcJ_G0015846.1 mouse_genomes_project 1 31699980 31700672 + Imp4 protein_coding processed_transcript MGP_BALBcJ_T0005638.1 MGP_BALBcJ_G0004748.1 mouse_genomes_project 1 20428641 20428992 + Gm29107 lincRNA lincRNA MGP_BALBcJ_T0005967.1 MGP_BALBcJ_G0005002.1 mouse_genomes_project 1 169998281 170002804 + Gm10522 lincRNA lincRNA MGP_BALBcJ_T0011953.1 MGP_BALBcJ_G0010050.1 mouse_genomes_project 1 32239395 32239624 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022801.1 MGP_BALBcJ_G0016572.1 mouse_genomes_project 1 156075404 156084940 - MGP_BALBcJ_P0022801 Tex35 protein_coding protein_coding MGP_BALBcJ_T0022802.1 MGP_BALBcJ_G0016572.1 mouse_genomes_project 1 156075404 156084940 - MGP_BALBcJ_P0022802 Tex35 protein_coding protein_coding MGP_BALBcJ_T0022803.1 MGP_BALBcJ_G0016572.1 mouse_genomes_project 1 156075411 156084939 - MGP_BALBcJ_P0022803 Tex35 protein_coding protein_coding MGP_BALBcJ_T0022804.1 MGP_BALBcJ_G0016572.1 mouse_genomes_project 1 156075418 156084970 - MGP_BALBcJ_P0022804 Tex35 protein_coding protein_coding MGP_BALBcJ_T0022805.1 MGP_BALBcJ_G0016572.1 mouse_genomes_project 1 156075577 156084678 - MGP_BALBcJ_P0022805 Tex35 protein_coding protein_coding MGP_BALBcJ_T0022806.1 MGP_BALBcJ_G0016572.1 mouse_genomes_project 1 156075579 156084935 - MGP_BALBcJ_P0022806 Tex35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022484.1 MGP_BALBcJ_G0016516.1 mouse_genomes_project 1 149253959 149268706 + MGP_BALBcJ_P0022484 Pdc protein_coding protein_coding MGP_BALBcJ_T0022485.1 MGP_BALBcJ_G0016516.1 mouse_genomes_project 1 149253959 149268705 + MGP_BALBcJ_P0022485 Pdc protein_coding protein_coding MGP_BALBcJ_T0022486.1 MGP_BALBcJ_G0016516.1 mouse_genomes_project 1 149253968 149268122 + MGP_BALBcJ_P0022486 Pdc protein_coding protein_coding MGP_BALBcJ_T0022487.1 MGP_BALBcJ_G0016516.1 mouse_genomes_project 1 149253971 149268703 + MGP_BALBcJ_P0022487 Pdc protein_coding protein_coding MGP_BALBcJ_T0098733.1 MGP_BALBcJ_G0036787.1 mouse_genomes_project 1 126050827 126050957 + Gm23370 scaRNA scaRNA MGP_BALBcJ_T0012316.1 MGP_BALBcJ_G0010413.1 mouse_genomes_project 1 176179820 176180657 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023582.1 MGP_BALBcJ_G0016742.1 mouse_genomes_project 1 172329016 172330050 + MGP_BALBcJ_P0023582 Olfr1404 protein_coding protein_coding MGP_BALBcJ_T0019324.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34599275 34648044 + Inpp4a protein_coding processed_transcript MGP_BALBcJ_T0019325.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34599301 34710431 + MGP_BALBcJ_P0019325 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019326.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34599303 34602177 + Inpp4a protein_coding retained_intron MGP_BALBcJ_T0019327.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34599325 34699149 + MGP_BALBcJ_P0019327 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019328.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34599718 34707882 + MGP_BALBcJ_P0019328 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019329.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34599718 34708326 + MGP_BALBcJ_P0019329 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019330.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34656980 34703283 + MGP_BALBcJ_P0019330 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019331.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34656980 34708062 + MGP_BALBcJ_P0019331 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019332.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34657502 34707852 + MGP_BALBcJ_P0019332 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019333.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34669151 34704035 + MGP_BALBcJ_P0019333 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019334.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34669151 34704027 + MGP_BALBcJ_P0019334 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019335.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34669155 34704032 + MGP_BALBcJ_P0019335 Inpp4a protein_coding protein_coding MGP_BALBcJ_T0019336.1 MGP_BALBcJ_G0015874.1 mouse_genomes_project 1 34677359 34679763 + Inpp4a protein_coding retained_intron MGP_BALBcJ_T0099129.1 MGP_BALBcJ_G0037165.1 mouse_genomes_project 1 136074344 136074448 - Gm25609 snRNA snRNA MGP_BALBcJ_T0021384.1 MGP_BALBcJ_G0016277.1 mouse_genomes_project 1 91742194 91772716 + MGP_BALBcJ_P0021384 Ppp1r7 protein_coding protein_coding MGP_BALBcJ_T0021385.1 MGP_BALBcJ_G0016277.1 mouse_genomes_project 1 91742995 91751971 + MGP_BALBcJ_P0021385 Ppp1r7 protein_coding protein_coding MGP_BALBcJ_T0021386.1 MGP_BALBcJ_G0016277.1 mouse_genomes_project 1 91743047 91751902 + MGP_BALBcJ_P0021386 Ppp1r7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019449.1 MGP_BALBcJ_G0015898.1 mouse_genomes_project 1 36943267 36976662 - MGP_BALBcJ_P0019449 Creg2 protein_coding protein_coding MGP_BALBcJ_T0022072.1 MGP_BALBcJ_G0016427.1 mouse_genomes_project 1 132098167 132117910 + MGP_BALBcJ_P0022072 protein_coding protein_coding MGP_BALBcJ_T0022073.1 MGP_BALBcJ_G0016427.1 mouse_genomes_project 1 132098167 132118117 + MGP_BALBcJ_P0022073 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022075.1 MGP_BALBcJ_G0016427.1 mouse_genomes_project 1 132110090 132118117 + MGP_BALBcJ_P0022075 protein_coding protein_coding MGP_BALBcJ_T0022077.1 MGP_BALBcJ_G0016427.1 mouse_genomes_project 1 132115427 132117938 + MGP_BALBcJ_P0022077 protein_coding protein_coding MGP_BALBcJ_T0009466.1 MGP_BALBcJ_G0007591.1 mouse_genomes_project 1 60998530 60998635 + Gm44468 miRNA miRNA MGP_BALBcJ_T0009480.1 MGP_BALBcJ_G0007605.1 mouse_genomes_project 1 74521663 74521747 + Mir6343 miRNA miRNA MGP_BALBcJ_T0012077.1 MGP_BALBcJ_G0010174.1 mouse_genomes_project 1 71352214 71352548 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022523.1 MGP_BALBcJ_G0016521.1 mouse_genomes_project 1 150325526 150345466 + MGP_BALBcJ_P0022523 Ivns1abp protein_coding protein_coding MGP_BALBcJ_T0022524.1 MGP_BALBcJ_G0016521.1 mouse_genomes_project 1 150325558 150337849 + MGP_BALBcJ_P0022524 Ivns1abp protein_coding protein_coding MGP_BALBcJ_T0022525.1 MGP_BALBcJ_G0016521.1 mouse_genomes_project 1 150325567 150345459 + MGP_BALBcJ_P0022525 Ivns1abp protein_coding protein_coding MGP_BALBcJ_T0022526.1 MGP_BALBcJ_G0016521.1 mouse_genomes_project 1 150325627 150344409 + MGP_BALBcJ_P0022526 Ivns1abp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022527.1 MGP_BALBcJ_G0016521.1 mouse_genomes_project 1 150342290 150343078 + MGP_BALBcJ_P0022527 Ivns1abp protein_coding protein_coding MGP_BALBcJ_T0020417.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72328425 72343902 - MGP_BALBcJ_P0020417 protein_coding unknown_likely_coding MGP_BALBcJ_T0020418.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72328430 72344386 - protein_coding retained_intron MGP_BALBcJ_T0020419.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72328430 72335839 - protein_coding retained_intron MGP_BALBcJ_T0020420.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72329479 72331392 - MGP_BALBcJ_P0020420 protein_coding protein_coding MGP_BALBcJ_T0020421.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72333725 72344250 - protein_coding processed_transcript MGP_BALBcJ_T0020422.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72334073 72345657 - MGP_BALBcJ_P0020422 protein_coding protein_coding MGP_BALBcJ_T0020423.1 MGP_BALBcJ_G0016085.1 mouse_genomes_project 1 72334090 72344155 - MGP_BALBcJ_P0020423 protein_coding protein_coding MGP_BALBcJ_T0100358.1 MGP_BALBcJ_G0038394.1 mouse_genomes_project 1 84479213 84479346 - Snora75 snoRNA snoRNA MGP_BALBcJ_T0019146.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31150084 31556580 + MGP_BALBcJ_P0019146 Dst protein_coding protein_coding MGP_BALBcJ_T0019147.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31150131 31557645 + MGP_BALBcJ_P0019147 Dst protein_coding unknown_likely_coding MGP_BALBcJ_T0019148.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31248288 31423568 + MGP_BALBcJ_P0019148 Dst protein_coding protein_coding MGP_BALBcJ_T0019149.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31248290 31386091 + MGP_BALBcJ_P0019149 Dst protein_coding protein_coding MGP_BALBcJ_T0019150.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31248534 31386092 + MGP_BALBcJ_P0019150 Dst protein_coding protein_coding MGP_BALBcJ_T0019151.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31248588 31413461 + Dst protein_coding retained_intron MGP_BALBcJ_T0019152.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31254208 31557636 + MGP_BALBcJ_P0019152 Dst protein_coding protein_coding MGP_BALBcJ_T0019153.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31254221 31557638 + MGP_BALBcJ_P0019153 Dst protein_coding protein_coding MGP_BALBcJ_T0019154.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31254233 31557647 + MGP_BALBcJ_P0019154 Dst protein_coding protein_coding MGP_BALBcJ_T0019155.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31337432 31368124 + Dst protein_coding retained_intron MGP_BALBcJ_T0019156.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31370538 31403282 + Dst protein_coding processed_transcript MGP_BALBcJ_T0019157.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31409090 31557390 + MGP_BALBcJ_P0019157 Dst protein_coding protein_coding MGP_BALBcJ_T0019158.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31409090 31432677 + MGP_BALBcJ_P0019158 Dst protein_coding protein_coding MGP_BALBcJ_T0019159.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31409090 31442034 + MGP_BALBcJ_P0019159 Dst protein_coding protein_coding MGP_BALBcJ_T0019160.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31410684 31414162 + Dst protein_coding retained_intron MGP_BALBcJ_T0019161.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31427678 31432020 + Dst protein_coding retained_intron MGP_BALBcJ_T0019162.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31506617 31557390 + MGP_BALBcJ_P0019162 Dst protein_coding protein_coding MGP_BALBcJ_T0019163.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31519359 31521082 + Dst protein_coding retained_intron MGP_BALBcJ_T0019164.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31542420 31552453 + MGP_BALBcJ_P0019164 Dst protein_coding protein_coding MGP_BALBcJ_T0019165.1 MGP_BALBcJ_G0015844.1 mouse_genomes_project 1 31543411 31555639 + MGP_BALBcJ_P0019165 Dst protein_coding protein_coding MGP_BALBcJ_T0021738.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124101469 124146506 - MGP_BALBcJ_P0021738 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021739.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124101470 124146326 - MGP_BALBcJ_P0021739 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021740.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124102049 124106814 - Actr3 protein_coding retained_intron MGP_BALBcJ_T0021741.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124102455 124146260 - MGP_BALBcJ_P0021741 Actr3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021742.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124105690 124107518 - Actr3 protein_coding retained_intron MGP_BALBcJ_T0021743.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124115068 124118149 - Actr3 protein_coding retained_intron MGP_BALBcJ_T0021744.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124115087 124146506 - MGP_BALBcJ_P0021744 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021745.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124115117 124145435 - MGP_BALBcJ_P0021745 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021746.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124116499 124146233 - MGP_BALBcJ_P0021746 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021747.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124116556 124146486 - MGP_BALBcJ_P0021747 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021748.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124116565 124146249 - MGP_BALBcJ_P0021748 Actr3 protein_coding protein_coding MGP_BALBcJ_T0021749.1 MGP_BALBcJ_G0016357.1 mouse_genomes_project 1 124126372 124146207 - Actr3 protein_coding retained_intron MGP_BALBcJ_T0020900.1 MGP_BALBcJ_G0016167.1 mouse_genomes_project 1 82936428 82997590 + MGP_BALBcJ_P0020900 Fbxo36 protein_coding protein_coding MGP_BALBcJ_T0020901.1 MGP_BALBcJ_G0016167.1 mouse_genomes_project 1 82936440 82997590 + Fbxo36 protein_coding processed_transcript MGP_BALBcJ_T0020902.1 MGP_BALBcJ_G0016167.1 mouse_genomes_project 1 82963316 82997590 + Fbxo36 protein_coding processed_transcript MGP_BALBcJ_T0020903.1 MGP_BALBcJ_G0016167.1 mouse_genomes_project 1 82966031 82997590 + Fbxo36 protein_coding processed_transcript MGP_BALBcJ_T0023065.1 MGP_BALBcJ_G0016620.1 mouse_genomes_project 1 163072748 163094948 + MGP_BALBcJ_P0023065 Sell protein_coding protein_coding MGP_BALBcJ_T0023066.1 MGP_BALBcJ_G0016620.1 mouse_genomes_project 1 163072851 163091439 + MGP_BALBcJ_P0023066 Sell protein_coding protein_coding MGP_BALBcJ_T0023067.1 MGP_BALBcJ_G0016620.1 mouse_genomes_project 1 163072955 163090459 + MGP_BALBcJ_P0023067 Sell protein_coding protein_coding MGP_BALBcJ_T0023068.1 MGP_BALBcJ_G0016620.1 mouse_genomes_project 1 163079728 163090763 + MGP_BALBcJ_P0023068 Sell protein_coding protein_coding MGP_BALBcJ_T0023573.1 MGP_BALBcJ_G0016736.1 mouse_genomes_project 1 171812836 171814677 + MGP_BALBcJ_P0023573 Crp protein_coding protein_coding MGP_BALBcJ_T0023574.1 MGP_BALBcJ_G0016736.1 mouse_genomes_project 1 171812837 171949194 + Crp protein_coding processed_transcript MGP_BALBcJ_T0000379.1 MGP_BALBcJ_G0000320.1 mouse_genomes_project 1 10871606 10873855 - TEC TEC MGP_BALBcJ_T0005886.1 MGP_BALBcJ_G0004939.1 mouse_genomes_project 1 135091524 135094702 - Gm37552 lincRNA lincRNA MGP_BALBcJ_T0023025.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161888493 161913657 - MGP_BALBcJ_P0023025 Fmo2 protein_coding protein_coding MGP_BALBcJ_T0023026.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161888498 161900964 - Fmo2 protein_coding retained_intron MGP_BALBcJ_T0023027.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161890610 161913610 - MGP_BALBcJ_P0023027 Fmo2 protein_coding protein_coding MGP_BALBcJ_T0023028.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161892212 161894832 - Fmo2 protein_coding processed_transcript MGP_BALBcJ_T0023029.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161901985 161913429 - MGP_BALBcJ_P0023029 Fmo2 protein_coding protein_coding MGP_BALBcJ_T0023030.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161902495 161913671 - Fmo2 protein_coding retained_intron MGP_BALBcJ_T0023031.1 MGP_BALBcJ_G0016608.1 mouse_genomes_project 1 161912625 161913665 - Fmo2 protein_coding retained_intron MGP_BALBcJ_T0012098.1 MGP_BALBcJ_G0010195.1 mouse_genomes_project 1 81283991 81285025 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019886.1 MGP_BALBcJ_G0015985.1 mouse_genomes_project 1 56064421 56124154 + MGP_BALBcJ_P0019886 Aox4 protein_coding protein_coding MGP_BALBcJ_T0019887.1 MGP_BALBcJ_G0015985.1 mouse_genomes_project 1 56064456 56115855 + Aox4 protein_coding processed_transcript MGP_BALBcJ_T0019888.1 MGP_BALBcJ_G0015985.1 mouse_genomes_project 1 56064475 56069875 + Aox4 protein_coding processed_transcript MGP_BALBcJ_T0019889.1 MGP_BALBcJ_G0015985.1 mouse_genomes_project 1 56065242 56067825 + Aox4 protein_coding retained_intron MGP_BALBcJ_T0019890.1 MGP_BALBcJ_G0015985.1 mouse_genomes_project 1 56094941 56099691 + Aox4 protein_coding retained_intron MGP_BALBcJ_T0005819.1 MGP_BALBcJ_G0004885.1 mouse_genomes_project 1 93217783 93223626 + 4930440C22Rik lincRNA lincRNA MGP_BALBcJ_T0005820.1 MGP_BALBcJ_G0004885.1 mouse_genomes_project 1 93218142 93223646 + 4930440C22Rik lincRNA lincRNA MGP_BALBcJ_T0019141.1 MGP_BALBcJ_G0015843.1 mouse_genomes_project 1 31094084 31149651 - MGP_BALBcJ_P0019141 Bend6 protein_coding protein_coding MGP_BALBcJ_T0019142.1 MGP_BALBcJ_G0015843.1 mouse_genomes_project 1 31094084 31149698 - MGP_BALBcJ_P0019142 Bend6 protein_coding protein_coding MGP_BALBcJ_T0019143.1 MGP_BALBcJ_G0015843.1 mouse_genomes_project 1 31104723 31125476 - Bend6 protein_coding processed_transcript MGP_BALBcJ_T0019144.1 MGP_BALBcJ_G0015843.1 mouse_genomes_project 1 31105184 31125838 - Bend6 protein_coding retained_intron MGP_BALBcJ_T0019145.1 MGP_BALBcJ_G0015843.1 mouse_genomes_project 1 31115764 31125486 - Bend6 protein_coding processed_transcript MGP_BALBcJ_T0098802.1 MGP_BALBcJ_G0036855.1 mouse_genomes_project 1 151679993 151683855 - Gm15479 sense_intronic sense_intronic MGP_BALBcJ_T0002970.1 MGP_BALBcJ_G0002788.1 mouse_genomes_project 1 190602586 190603423 + A230020J21Rik antisense antisense MGP_BALBcJ_T0002971.1 MGP_BALBcJ_G0002788.1 mouse_genomes_project 1 190602587 190607013 + A230020J21Rik antisense antisense MGP_BALBcJ_T0000477.1 MGP_BALBcJ_G0000415.1 mouse_genomes_project 1 57868660 57874079 + TEC TEC MGP_BALBcJ_T0021549.1 MGP_BALBcJ_G0016310.1 mouse_genomes_project 1 104629455 104851574 + MGP_BALBcJ_P0021549 Phlpp1 protein_coding protein_coding MGP_BALBcJ_T0021550.1 MGP_BALBcJ_G0016310.1 mouse_genomes_project 1 104741332 104747331 + Phlpp1 protein_coding retained_intron MGP_BALBcJ_T0021551.1 MGP_BALBcJ_G0016310.1 mouse_genomes_project 1 104774078 104775844 + Phlpp1 protein_coding processed_transcript MGP_BALBcJ_T0000526.1 MGP_BALBcJ_G0000464.1 mouse_genomes_project 1 78776692 78778525 - TEC TEC MGP_BALBcJ_T0020292.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66031750 67109550 - MGP_BALBcJ_P0020292 Erbb4 protein_coding protein_coding MGP_BALBcJ_T0020293.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66031750 67109853 - MGP_BALBcJ_P0020293 Erbb4 protein_coding protein_coding MGP_BALBcJ_T0020294.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66039610 66728106 - MGP_BALBcJ_P0020294 Erbb4 protein_coding unknown_likely_coding MGP_BALBcJ_T0020295.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66039610 66728698 - MGP_BALBcJ_P0020295 Erbb4 protein_coding unknown_likely_coding MGP_BALBcJ_T0020296.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66248784 67109550 - MGP_BALBcJ_P0020296 Erbb4 protein_coding protein_coding MGP_BALBcJ_T0020297.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66284237 66292462 - Erbb4 protein_coding processed_transcript MGP_BALBcJ_T0020298.1 MGP_BALBcJ_G0016058.1 mouse_genomes_project 1 66292293 66324712 - Erbb4 protein_coding retained_intron MGP_BALBcJ_T0002782.1 MGP_BALBcJ_G0002642.1 mouse_genomes_project 1 48829578 48939969 - 9330175M20Rik antisense antisense MGP_BALBcJ_T0002726.1 MGP_BALBcJ_G0002602.1 mouse_genomes_project 1 3243395 3248826 - 4732440D04Rik antisense antisense MGP_BALBcJ_T0002727.1 MGP_BALBcJ_G0002602.1 mouse_genomes_project 1 3246825 3248123 - 4732440D04Rik antisense antisense MGP_BALBcJ_T0002728.1 MGP_BALBcJ_G0002602.1 mouse_genomes_project 1 3248144 3248825 - 4732440D04Rik antisense antisense MGP_BALBcJ_T0000605.1 MGP_BALBcJ_G0000543.1 mouse_genomes_project 1 126804502 126808385 - TEC TEC MGP_BALBcJ_T0012151.1 MGP_BALBcJ_G0010248.1 mouse_genomes_project 1 105749895 105751149 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020319.1 MGP_BALBcJ_G0016062.1 mouse_genomes_project 1 69034659 69105008 - MGP_BALBcJ_P0020319 Bard1 protein_coding protein_coding MGP_BALBcJ_T0102092.1 MGP_BALBcJ_G0039909.1 mouse_genomes_project 1 172166423 172167282 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009510.1 MGP_BALBcJ_G0007635.1 mouse_genomes_project 1 134272431 134272512 - Mir1231 miRNA miRNA MGP_BALBcJ_T0099111.1 MGP_BALBcJ_G0037147.1 mouse_genomes_project 1 96494745 96494852 + Gm24465 snRNA snRNA MGP_BALBcJ_T0019854.1 MGP_BALBcJ_G0015979.1 mouse_genomes_project 1 55264211 55275104 + MGP_BALBcJ_P0019854 9430016H08Rik protein_coding protein_coding MGP_BALBcJ_T0005808.1 MGP_BALBcJ_G0004874.1 mouse_genomes_project 1 89352975 89353777 - Gm28199 lincRNA lincRNA MGP_BALBcJ_T0024295.1 MGP_BALBcJ_G0016902.1 mouse_genomes_project 1 194180211 194183377 + Plxna2 protein_coding retained_intron MGP_BALBcJ_T0024296.1 MGP_BALBcJ_G0016902.1 mouse_genomes_project 1 194182334 194380984 + MGP_BALBcJ_P0024296 Plxna2 protein_coding protein_coding MGP_BALBcJ_T0024297.1 MGP_BALBcJ_G0016902.1 mouse_genomes_project 1 194207766 194220066 + Plxna2 protein_coding processed_transcript MGP_BALBcJ_T0024298.1 MGP_BALBcJ_G0016902.1 mouse_genomes_project 1 194326231 194348300 + MGP_BALBcJ_P0024298 Plxna2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024299.1 MGP_BALBcJ_G0016902.1 mouse_genomes_project 1 194368941 194378342 + Plxna2 protein_coding retained_intron MGP_BALBcJ_T0006039.1 MGP_BALBcJ_G0005058.1 mouse_genomes_project 1 194599843 194600194 - Gm37027 lincRNA lincRNA MGP_BALBcJ_T0021209.1 MGP_BALBcJ_G0016238.1 mouse_genomes_project 1 89523166 89525858 + Rbm44 protein_coding retained_intron MGP_BALBcJ_T0021210.1 MGP_BALBcJ_G0016238.1 mouse_genomes_project 1 89523178 89530831 + MGP_BALBcJ_P0021210 Rbm44 protein_coding protein_coding MGP_BALBcJ_T0021211.1 MGP_BALBcJ_G0016238.1 mouse_genomes_project 1 89523180 89549513 + MGP_BALBcJ_P0021211 Rbm44 protein_coding protein_coding MGP_BALBcJ_T0021212.1 MGP_BALBcJ_G0016238.1 mouse_genomes_project 1 89547346 89549011 + Rbm44 protein_coding retained_intron MGP_BALBcJ_T0002757.1 MGP_BALBcJ_G0002622.1 mouse_genomes_project 1 33814499 33815203 - Gm38033 antisense antisense MGP_BALBcJ_T0099114.1 MGP_BALBcJ_G0037150.1 mouse_genomes_project 1 116042155 116042319 + Gm24030 snRNA snRNA MGP_BALBcJ_T0000441.1 MGP_BALBcJ_G0000379.1 mouse_genomes_project 1 34598762 34599108 - TEC TEC MGP_BALBcJ_T0011883.1 MGP_BALBcJ_G0009980.1 mouse_genomes_project 1 13816885 13817303 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021360.1 MGP_BALBcJ_G0016271.1 mouse_genomes_project 1 91529423 91539601 + MGP_BALBcJ_P0021360 Agxt protein_coding protein_coding MGP_BALBcJ_T0021361.1 MGP_BALBcJ_G0016271.1 mouse_genomes_project 1 91529751 91532188 + Agxt protein_coding retained_intron MGP_BALBcJ_T0021362.1 MGP_BALBcJ_G0016271.1 mouse_genomes_project 1 91534058 91539597 + Agxt protein_coding processed_transcript MGP_BALBcJ_T0011237.1 MGP_BALBcJ_G0009362.1 mouse_genomes_project 1 176094673 176094938 + Gm25288 misc_RNA misc_RNA MGP_BALBcJ_T0098436.1 MGP_BALBcJ_G0036490.1 mouse_genomes_project 1 153318768 153318888 - n-R5s220 rRNA rRNA MGP_BALBcJ_T0002885.1 MGP_BALBcJ_G0002719.1 mouse_genomes_project 1 139468061 139554137 - 4930590L20Rik antisense antisense MGP_BALBcJ_T0012307.1 MGP_BALBcJ_G0010404.1 mouse_genomes_project 1 170611856 170612026 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021172.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88973530 88983424 + MGP_BALBcJ_P0021172 Cops8 protein_coding protein_coding MGP_BALBcJ_T0021173.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88973557 88983206 + Cops8 protein_coding retained_intron MGP_BALBcJ_T0021174.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88973559 88981548 + Cops8 protein_coding retained_intron MGP_BALBcJ_T0021175.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88973580 88975740 + Cops8 protein_coding retained_intron MGP_BALBcJ_T0021176.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88973580 88981119 + Cops8 protein_coding processed_transcript MGP_BALBcJ_T0021177.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88979735 88981410 + Cops8 protein_coding retained_intron MGP_BALBcJ_T0021178.1 MGP_BALBcJ_G0016232.1 mouse_genomes_project 1 88981427 88982475 + Cops8 protein_coding retained_intron MGP_BALBcJ_T0018787.1 MGP_BALBcJ_G0015768.1 mouse_genomes_project 1 7014423 7022693 - MGP_BALBcJ_P0018787 Tcf24 protein_coding protein_coding MGP_BALBcJ_T0018788.1 MGP_BALBcJ_G0015768.1 mouse_genomes_project 1 7014431 7017070 - MGP_BALBcJ_P0018788 Tcf24 protein_coding protein_coding MGP_BALBcJ_T0000475.1 MGP_BALBcJ_G0000413.1 mouse_genomes_project 1 57741416 57744864 + TEC TEC MGP_BALBcJ_T0000521.1 MGP_BALBcJ_G0000459.1 mouse_genomes_project 1 78286462 78287629 - TEC TEC MGP_BALBcJ_T0019452.1 MGP_BALBcJ_G0015900.1 mouse_genomes_project 1 37126289 37127474 - MGP_BALBcJ_P0019452 Gm3646 protein_coding protein_coding MGP_BALBcJ_T0021387.1 MGP_BALBcJ_G0016278.1 mouse_genomes_project 1 91773156 91804772 + MGP_BALBcJ_P0021387 Ano7 protein_coding protein_coding MGP_BALBcJ_T0021388.1 MGP_BALBcJ_G0016278.1 mouse_genomes_project 1 91773156 91803868 + MGP_BALBcJ_P0021388 Ano7 protein_coding protein_coding MGP_BALBcJ_T0021389.1 MGP_BALBcJ_G0016278.1 mouse_genomes_project 1 91802325 91804038 + MGP_BALBcJ_P0021389 Ano7 protein_coding protein_coding MGP_BALBcJ_T0000491.1 MGP_BALBcJ_G0000429.1 mouse_genomes_project 1 62727116 62731484 + TEC TEC MGP_BALBcJ_T0005927.1 MGP_BALBcJ_G0004971.1 mouse_genomes_project 1 154515970 154523562 - Gm5532 lincRNA lincRNA MGP_BALBcJ_T0005928.1 MGP_BALBcJ_G0004971.1 mouse_genomes_project 1 154521457 154523594 - Gm5532 lincRNA lincRNA MGP_BALBcJ_T0000613.1 MGP_BALBcJ_G0000551.1 mouse_genomes_project 1 128574405 128576631 + TEC TEC MGP_BALBcJ_T0000467.1 MGP_BALBcJ_G0000405.1 mouse_genomes_project 1 52761484 52764233 - TEC TEC MGP_BALBcJ_T0000770.1 MGP_BALBcJ_G0000704.1 mouse_genomes_project 1 182244567 182246521 + TEC TEC MGP_BALBcJ_T0102003.1 MGP_BALBcJ_G0039843.1 mouse_genomes_project 1 61898553 61920022 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0011986.1 MGP_BALBcJ_G0010083.1 mouse_genomes_project 1 43137989 43140996 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009519.1 MGP_BALBcJ_G0007644.1 mouse_genomes_project 1 159328585 159328694 - Mir1927 miRNA miRNA MGP_BALBcJ_T0023861.1 MGP_BALBcJ_G0016815.1 mouse_genomes_project 1 180447471 180451809 + MGP_BALBcJ_P0023861 Lefty1 protein_coding protein_coding MGP_BALBcJ_T0023862.1 MGP_BALBcJ_G0016815.1 mouse_genomes_project 1 180449304 180451219 + Lefty1 protein_coding retained_intron MGP_BALBcJ_T0009535.1 MGP_BALBcJ_G0007660.1 mouse_genomes_project 1 184755036 184755105 + Mir664 miRNA miRNA MGP_BALBcJ_T0005870.1 MGP_BALBcJ_G0004924.1 mouse_genomes_project 1 125589055 125593408 - 4930599A14Rik lincRNA lincRNA MGP_BALBcJ_T0005871.1 MGP_BALBcJ_G0004924.1 mouse_genomes_project 1 125591580 125593434 - 4930599A14Rik lincRNA lincRNA MGP_BALBcJ_T0102063.1 MGP_BALBcJ_G0039880.1 mouse_genomes_project 1 86384803 86385647 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102072.1 MGP_BALBcJ_G0039889.1 mouse_genomes_project 1 95606157 95746080 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012327.1 MGP_BALBcJ_G0010424.1 mouse_genomes_project 1 180947092 180947385 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012299.1 MGP_BALBcJ_G0010396.1 mouse_genomes_project 1 166178459 166178868 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005790.1 MGP_BALBcJ_G0004857.1 mouse_genomes_project 1 84092957 84108626 - Gm28100 lincRNA lincRNA MGP_BALBcJ_T0011917.1 MGP_BALBcJ_G0010014.1 mouse_genomes_project 1 24521521 24521938 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100357.1 MGP_BALBcJ_G0038393.1 mouse_genomes_project 1 84208315 84208437 + Gm22786 snoRNA snoRNA MGP_BALBcJ_T0012061.1 MGP_BALBcJ_G0010158.1 mouse_genomes_project 1 63534140 63534914 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020974.1 MGP_BALBcJ_G0016183.1 mouse_genomes_project 1 84426561 84428437 + B3gnt7 protein_coding retained_intron MGP_BALBcJ_T0020975.1 MGP_BALBcJ_G0016183.1 mouse_genomes_project 1 84426963 84431035 + MGP_BALBcJ_P0020975 B3gnt7 protein_coding protein_coding MGP_BALBcJ_T0020976.1 MGP_BALBcJ_G0016183.1 mouse_genomes_project 1 84427260 84429579 + MGP_BALBcJ_P0020976 B3gnt7 protein_coding protein_coding MGP_BALBcJ_T0011827.1 MGP_BALBcJ_G0009924.1 mouse_genomes_project 1 281356 281836 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022994.1 MGP_BALBcJ_G0016603.1 mouse_genomes_project 1 161675655 161686358 + MGP_BALBcJ_P0022994 Myoc protein_coding protein_coding MGP_BALBcJ_T0002968.1 MGP_BALBcJ_G0002786.1 mouse_genomes_project 1 189729252 189730216 + Gm28172 antisense antisense MGP_BALBcJ_T0000659.1 MGP_BALBcJ_G0000595.1 mouse_genomes_project 1 140436770 140438042 + TEC TEC MGP_BALBcJ_T0022331.1 MGP_BALBcJ_G0016483.1 mouse_genomes_project 1 135106977 135182778 - MGP_BALBcJ_P0022331 Camsap2 protein_coding protein_coding MGP_BALBcJ_T0022332.1 MGP_BALBcJ_G0016483.1 mouse_genomes_project 1 135107106 135120602 - MGP_BALBcJ_P0022332 Camsap2 protein_coding protein_coding MGP_BALBcJ_T0022333.1 MGP_BALBcJ_G0016483.1 mouse_genomes_project 1 135108014 135182372 - MGP_BALBcJ_P0022333 Camsap2 protein_coding protein_coding MGP_BALBcJ_T0022334.1 MGP_BALBcJ_G0016483.1 mouse_genomes_project 1 135109460 135182372 - MGP_BALBcJ_P0022334 Camsap2 protein_coding protein_coding MGP_BALBcJ_T0022335.1 MGP_BALBcJ_G0016483.1 mouse_genomes_project 1 135133308 135136201 - Camsap2 protein_coding processed_transcript MGP_BALBcJ_T0022336.1 MGP_BALBcJ_G0016483.1 mouse_genomes_project 1 135170370 135182764 - Camsap2 protein_coding processed_transcript MGP_BALBcJ_T0011865.1 MGP_BALBcJ_G0009962.1 mouse_genomes_project 1 6589600 6590610 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100354.1 MGP_BALBcJ_G0038390.1 mouse_genomes_project 1 65230224 65230353 + Gm26342 snoRNA snoRNA MGP_BALBcJ_T0021608.1 MGP_BALBcJ_G0016330.1 mouse_genomes_project 1 116578850 116600553 + MGP_BALBcJ_P0021608 protein_coding protein_coding MGP_BALBcJ_T0023341.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170279971 170286478 - MGP_BALBcJ_P0023341 Tomm40l protein_coding protein_coding MGP_BALBcJ_T0023342.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170281763 170286412 - MGP_BALBcJ_P0023342 Tomm40l protein_coding protein_coding MGP_BALBcJ_T0023343.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170281763 170286148 - MGP_BALBcJ_P0023343 Tomm40l protein_coding protein_coding MGP_BALBcJ_T0023344.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170282324 170286415 - MGP_BALBcJ_P0023344 Tomm40l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023345.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170284789 170286424 - MGP_BALBcJ_P0023345 Tomm40l protein_coding protein_coding MGP_BALBcJ_T0023346.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170284860 170286408 - MGP_BALBcJ_P0023346 Tomm40l protein_coding protein_coding MGP_BALBcJ_T0023347.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170285049 170286396 - Tomm40l protein_coding processed_transcript MGP_BALBcJ_T0023348.1 MGP_BALBcJ_G0016687.1 mouse_genomes_project 1 170285142 170286460 - Tomm40l protein_coding retained_intron MGP_BALBcJ_T0002841.1 MGP_BALBcJ_G0002688.1 mouse_genomes_project 1 92135096 92155160 + Gm10550 antisense antisense MGP_BALBcJ_T0009498.1 MGP_BALBcJ_G0007623.1 mouse_genomes_project 1 96982819 96982929 + Gm26134 miRNA miRNA MGP_BALBcJ_T0021856.1 MGP_BALBcJ_G0016379.1 mouse_genomes_project 1 129401648 129428451 - MGP_BALBcJ_P0021856 C4bp protein_coding protein_coding MGP_BALBcJ_T0021857.1 MGP_BALBcJ_G0016379.1 mouse_genomes_project 1 129403689 129415262 - MGP_BALBcJ_P0021857 C4bp protein_coding protein_coding MGP_BALBcJ_T0021858.1 MGP_BALBcJ_G0016379.1 mouse_genomes_project 1 129409903 129428429 - MGP_BALBcJ_P0021858 C4bp protein_coding protein_coding MGP_BALBcJ_T0021859.1 MGP_BALBcJ_G0016379.1 mouse_genomes_project 1 129424598 129428443 - C4bp protein_coding retained_intron MGP_BALBcJ_T0011850.1 MGP_BALBcJ_G0009947.1 mouse_genomes_project 1 4231510 4231688 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098805.1 MGP_BALBcJ_G0036858.1 mouse_genomes_project 1 159354311 159359459 - Gm37529 sense_intronic sense_intronic MGP_BALBcJ_T0011863.1 MGP_BALBcJ_G0009960.1 mouse_genomes_project 1 6545561 6547746 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023624.1 MGP_BALBcJ_G0016764.1 mouse_genomes_project 1 173440518 173528934 + MGP_BALBcJ_P0023624 Spta1 protein_coding protein_coding MGP_BALBcJ_T0023625.1 MGP_BALBcJ_G0016764.1 mouse_genomes_project 1 173495593 173528042 + Spta1 protein_coding retained_intron MGP_BALBcJ_T0002897.1 MGP_BALBcJ_G0002727.1 mouse_genomes_project 1 152743283 152749061 - Gm28513 antisense antisense MGP_BALBcJ_T0019877.1 MGP_BALBcJ_G0015982.1 mouse_genomes_project 1 55852002 55881803 + MGP_BALBcJ_P0019877 Sgol2a protein_coding protein_coding MGP_BALBcJ_T0019878.1 MGP_BALBcJ_G0015982.1 mouse_genomes_project 1 55878619 55881802 + Sgol2a protein_coding retained_intron MGP_BALBcJ_T0023603.1 MGP_BALBcJ_G0016748.1 mouse_genomes_project 1 172678638 172695002 - MGP_BALBcJ_P0023603 BC094916 protein_coding protein_coding MGP_BALBcJ_T0000402.1 MGP_BALBcJ_G0000341.1 mouse_genomes_project 1 22490404 22492933 - TEC TEC MGP_BALBcJ_T0012101.1 MGP_BALBcJ_G0010198.1 mouse_genomes_project 1 82273067 82273613 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098804.1 MGP_BALBcJ_G0036857.1 mouse_genomes_project 1 151880187 151881998 - Gm28791 sense_intronic sense_intronic MGP_BALBcJ_T0002837.1 MGP_BALBcJ_G0002684.1 mouse_genomes_project 1 91299052 91301439 - 5033417F24Rik antisense antisense MGP_BALBcJ_T0098785.1 MGP_BALBcJ_G0036839.1 mouse_genomes_project 1 49442378 49443657 - Gm29453 sense_intronic sense_intronic MGP_BALBcJ_T0101593.1 MGP_BALBcJ_G0039619.1 mouse_genomes_project 1 179823455 179827289 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101594.1 MGP_BALBcJ_G0039619.1 mouse_genomes_project 1 179823659 179824923 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0019841.1 MGP_BALBcJ_G0015977.1 mouse_genomes_project 1 55235233 55243363 + MGP_BALBcJ_P0019841 1700066M21Rik protein_coding protein_coding MGP_BALBcJ_T0019842.1 MGP_BALBcJ_G0015977.1 mouse_genomes_project 1 55235246 55237776 + 1700066M21Rik protein_coding processed_transcript MGP_BALBcJ_T0019843.1 MGP_BALBcJ_G0015977.1 mouse_genomes_project 1 55235253 55237692 + 1700066M21Rik protein_coding processed_transcript MGP_BALBcJ_T0022407.1 MGP_BALBcJ_G0016497.1 mouse_genomes_project 1 138349788 138373012 + MGP_BALBcJ_P0022407 F13b protein_coding protein_coding MGP_BALBcJ_T0022408.1 MGP_BALBcJ_G0016497.1 mouse_genomes_project 1 138365653 138367164 + F13b protein_coding processed_transcript MGP_BALBcJ_T0005691.1 MGP_BALBcJ_G0004783.1 mouse_genomes_project 1 41132526 41133025 - Gm29156 lincRNA lincRNA MGP_BALBcJ_T0000358.1 MGP_BALBcJ_G0000299.1 mouse_genomes_project 1 5475728 5478262 - TEC TEC MGP_BALBcJ_T0009518.1 MGP_BALBcJ_G0007643.1 mouse_genomes_project 1 158366443 158366509 + Mir1843b miRNA miRNA MGP_BALBcJ_T0005723.1 MGP_BALBcJ_G0004808.1 mouse_genomes_project 1 59266699 59272534 + Gm11587 lincRNA lincRNA MGP_BALBcJ_T0000408.1 MGP_BALBcJ_G0000347.1 mouse_genomes_project 1 22850315 22855715 - TEC TEC MGP_BALBcJ_T0000370.1 MGP_BALBcJ_G0000311.1 mouse_genomes_project 1 8754732 8756857 + TEC TEC MGP_BALBcJ_T0011895.1 MGP_BALBcJ_G0009992.1 mouse_genomes_project 1 16408343 16410587 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012019.1 MGP_BALBcJ_G0010116.1 mouse_genomes_project 1 52923307 52924113 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005971.1 MGP_BALBcJ_G0005006.1 mouse_genomes_project 1 175591418 175594981 + Gm38101 lincRNA lincRNA MGP_BALBcJ_T0000493.1 MGP_BALBcJ_G0000431.1 mouse_genomes_project 1 64732486 64735592 - TEC TEC MGP_BALBcJ_T0102050.1 MGP_BALBcJ_G0039867.1 mouse_genomes_project 1 18477032 18478144 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002938.1 MGP_BALBcJ_G0002760.1 mouse_genomes_project 1 171353561 171354561 + Gm37950 antisense antisense MGP_BALBcJ_T0022457.1 MGP_BALBcJ_G0016509.1 mouse_genomes_project 1 142996712 143036248 - MGP_BALBcJ_P0022457 Rgs13 protein_coding protein_coding MGP_BALBcJ_T0022458.1 MGP_BALBcJ_G0016509.1 mouse_genomes_project 1 142996725 143036151 - MGP_BALBcJ_P0022458 Rgs13 protein_coding protein_coding MGP_BALBcJ_T0023718.1 MGP_BALBcJ_G0016785.1 mouse_genomes_project 1 177038989 177063241 + MGP_BALBcJ_P0023718 1700016C15Rik protein_coding protein_coding MGP_BALBcJ_T0012293.1 MGP_BALBcJ_G0010390.1 mouse_genomes_project 1 164743545 164744607 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012120.1 MGP_BALBcJ_G0010217.1 mouse_genomes_project 1 91822180 91822969 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020518.1 MGP_BALBcJ_G0016100.1 mouse_genomes_project 1 72812842 72826255 + MGP_BALBcJ_P0020518 Wnt6 protein_coding protein_coding MGP_BALBcJ_T0020519.1 MGP_BALBcJ_G0016100.1 mouse_genomes_project 1 72823371 72825535 + Wnt6 protein_coding retained_intron MGP_BALBcJ_T0006025.1 MGP_BALBcJ_G0005046.1 mouse_genomes_project 1 190173766 190183989 + Gm30932 lincRNA lincRNA MGP_BALBcJ_T0002878.1 MGP_BALBcJ_G0002712.1 mouse_genomes_project 1 133959643 133960487 + Gm15445 antisense antisense MGP_BALBcJ_T0005922.1 MGP_BALBcJ_G0004967.1 mouse_genomes_project 1 153251805 153261331 - lincRNA lincRNA MGP_BALBcJ_T0011223.1 MGP_BALBcJ_G0009348.1 mouse_genomes_project 1 48158078 48158392 + Gm25843 misc_RNA misc_RNA MGP_BALBcJ_T0099133.1 MGP_BALBcJ_G0037169.1 mouse_genomes_project 1 143469260 143469367 - Gm23672 snRNA snRNA MGP_BALBcJ_T0012010.1 MGP_BALBcJ_G0010107.1 mouse_genomes_project 1 49533355 49534039 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000633.1 MGP_BALBcJ_G0000570.1 mouse_genomes_project 1 134341489 134343740 - TEC TEC MGP_BALBcJ_T0016927.1 MGP_BALBcJ_G0015024.1 mouse_genomes_project 1 1538274 1541102 + Gm37587 processed_transcript retained_intron MGP_BALBcJ_T0016928.1 MGP_BALBcJ_G0015024.1 mouse_genomes_project 1 1539197 1541282 + Gm37587 processed_transcript antisense MGP_BALBcJ_T0019195.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32085070 32115096 - MGP_BALBcJ_P0019195 Fam168b protein_coding protein_coding MGP_BALBcJ_T0019196.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32085077 32115111 - MGP_BALBcJ_P0019196 Fam168b protein_coding protein_coding MGP_BALBcJ_T0019197.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32089086 32115010 - MGP_BALBcJ_P0019197 Fam168b protein_coding protein_coding MGP_BALBcJ_T0019198.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32089203 32115031 - MGP_BALBcJ_P0019198 Fam168b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019199.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32089860 32115080 - MGP_BALBcJ_P0019199 Fam168b protein_coding protein_coding MGP_BALBcJ_T0019200.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32091463 32115059 - Fam168b protein_coding processed_transcript MGP_BALBcJ_T0019201.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32091550 32115050 - MGP_BALBcJ_P0019201 Fam168b protein_coding protein_coding MGP_BALBcJ_T0019202.1 MGP_BALBcJ_G0015853.1 mouse_genomes_project 1 32100493 32115111 - Fam168b protein_coding retained_intron MGP_BALBcJ_T0012196.1 MGP_BALBcJ_G0010293.1 mouse_genomes_project 1 121818379 121819677 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020168.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524155 62587610 + MGP_BALBcJ_P0020168 Creb1 protein_coding protein_coding MGP_BALBcJ_T0020169.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524308 62587293 + MGP_BALBcJ_P0020169 Creb1 protein_coding protein_coding MGP_BALBcJ_T0020170.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524314 62551871 + Creb1 protein_coding retained_intron MGP_BALBcJ_T0020171.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524319 62591172 + MGP_BALBcJ_P0020171 Creb1 protein_coding protein_coding MGP_BALBcJ_T0020172.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524319 62572535 + MGP_BALBcJ_P0020172 Creb1 protein_coding protein_coding MGP_BALBcJ_T0020173.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524329 62594463 + MGP_BALBcJ_P0020173 Creb1 protein_coding protein_coding MGP_BALBcJ_T0020174.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524342 62568514 + Creb1 protein_coding processed_transcript MGP_BALBcJ_T0020175.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524369 62587382 + MGP_BALBcJ_P0020175 Creb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020176.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62524404 62587392 + MGP_BALBcJ_P0020176 Creb1 protein_coding protein_coding MGP_BALBcJ_T0020177.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62553856 62555498 + Creb1 protein_coding retained_intron MGP_BALBcJ_T0020178.1 MGP_BALBcJ_G0016033.1 mouse_genomes_project 1 62569788 62573469 + Creb1 protein_coding retained_intron MGP_BALBcJ_T0002845.1 MGP_BALBcJ_G0002690.1 mouse_genomes_project 1 103382751 103383650 - Gm15699 antisense antisense MGP_BALBcJ_T0000403.1 MGP_BALBcJ_G0000342.1 mouse_genomes_project 1 22508257 22523514 - TEC TEC MGP_BALBcJ_T0012024.1 MGP_BALBcJ_G0010121.1 mouse_genomes_project 1 53232044 53232392 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000688.1 MGP_BALBcJ_G0000624.1 mouse_genomes_project 1 155823276 155825918 - TEC TEC MGP_BALBcJ_T0011859.1 MGP_BALBcJ_G0009956.1 mouse_genomes_project 1 6291700 6292218 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022221.1 MGP_BALBcJ_G0016462.1 mouse_genomes_project 1 134061557 134066527 - MGP_BALBcJ_P0022221 Elf3 protein_coding protein_coding MGP_BALBcJ_T0022222.1 MGP_BALBcJ_G0016462.1 mouse_genomes_project 1 134061561 134066397 - MGP_BALBcJ_P0022222 Elf3 protein_coding protein_coding MGP_BALBcJ_T0022223.1 MGP_BALBcJ_G0016462.1 mouse_genomes_project 1 134064639 134065632 - Elf3 protein_coding retained_intron MGP_BALBcJ_T0102083.1 MGP_BALBcJ_G0039900.1 mouse_genomes_project 1 116315151 116342831 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0021877.1 MGP_BALBcJ_G0016385.1 mouse_genomes_project 1 129593288 129618808 + MGP_BALBcJ_P0021877 Pigr protein_coding protein_coding MGP_BALBcJ_T0021878.1 MGP_BALBcJ_G0016385.1 mouse_genomes_project 1 129593492 129611266 + MGP_BALBcJ_P0021878 Pigr protein_coding protein_coding MGP_BALBcJ_T0021879.1 MGP_BALBcJ_G0016385.1 mouse_genomes_project 1 129595614 129611234 + MGP_BALBcJ_P0021879 Pigr protein_coding protein_coding MGP_BALBcJ_T0012305.1 MGP_BALBcJ_G0010402.1 mouse_genomes_project 1 169942980 169943275 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022869.1 MGP_BALBcJ_G0016582.1 mouse_genomes_project 1 159111685 159181819 - MGP_BALBcJ_P0022869 Tnn protein_coding protein_coding MGP_BALBcJ_T0022870.1 MGP_BALBcJ_G0016582.1 mouse_genomes_project 1 159112627 159176125 - MGP_BALBcJ_P0022870 Tnn protein_coding protein_coding MGP_BALBcJ_T0101585.1 MGP_BALBcJ_G0039616.1 mouse_genomes_project 1 155804818 155807292 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101586.1 MGP_BALBcJ_G0039616.1 mouse_genomes_project 1 155805119 155805430 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0005700.1 MGP_BALBcJ_G0004791.1 mouse_genomes_project 1 49057342 49058342 - 1700072G22Rik lincRNA lincRNA MGP_BALBcJ_T0019794.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52837035 52880795 - MGP_BALBcJ_P0019794 Sf3b1 protein_coding protein_coding MGP_BALBcJ_T0019795.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52837039 52842986 - Sf3b1 protein_coding retained_intron MGP_BALBcJ_T0019796.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52840823 52844411 - Sf3b1 protein_coding retained_intron MGP_BALBcJ_T0019797.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52855180 52880778 - Sf3b1 protein_coding retained_intron MGP_BALBcJ_T0019798.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52859679 52868181 - Sf3b1 protein_coding retained_intron MGP_BALBcJ_T0019799.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52865213 52880708 - MGP_BALBcJ_P0019799 Sf3b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019800.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52868788 52880687 - Sf3b1 protein_coding processed_transcript MGP_BALBcJ_T0019801.1 MGP_BALBcJ_G0015966.1 mouse_genomes_project 1 52868918 52869918 - Sf3b1 protein_coding retained_intron MGP_BALBcJ_T0000602.1 MGP_BALBcJ_G0000540.1 mouse_genomes_project 1 125990996 125995757 + TEC TEC MGP_BALBcJ_T0020214.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63150190 63170746 - MGP_BALBcJ_P0020214 Idh1 protein_coding protein_coding MGP_BALBcJ_T0020215.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63150192 63178061 - MGP_BALBcJ_P0020215 Idh1 protein_coding protein_coding MGP_BALBcJ_T0020216.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63157773 63178020 - MGP_BALBcJ_P0020216 Idh1 protein_coding protein_coding MGP_BALBcJ_T0020217.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63157818 63178082 - MGP_BALBcJ_P0020217 Idh1 protein_coding protein_coding MGP_BALBcJ_T0020218.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63160163 63167134 - MGP_BALBcJ_P0020218 Idh1 protein_coding protein_coding MGP_BALBcJ_T0020219.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63162694 63178041 - MGP_BALBcJ_P0020219 Idh1 protein_coding protein_coding MGP_BALBcJ_T0020220.1 MGP_BALBcJ_G0016046.1 mouse_genomes_project 1 63166865 63178061 - MGP_BALBcJ_P0020220 Idh1 protein_coding protein_coding MGP_BALBcJ_T0011930.1 MGP_BALBcJ_G0010027.1 mouse_genomes_project 1 28544040 28544682 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100407.1 MGP_BALBcJ_G0038443.1 mouse_genomes_project 1 170378982 170379073 + Gm25151 snoRNA snoRNA MGP_BALBcJ_T0000474.1 MGP_BALBcJ_G0000412.1 mouse_genomes_project 1 57579634 57581506 - TEC TEC MGP_BALBcJ_T0024127.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190504054 190525879 + MGP_BALBcJ_P0024127 Angel2 protein_coding protein_coding MGP_BALBcJ_T0024128.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507434 190517353 + Angel2 protein_coding retained_intron MGP_BALBcJ_T0024129.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507434 190525879 + MGP_BALBcJ_P0024129 Angel2 protein_coding protein_coding MGP_BALBcJ_T0024130.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507434 190525879 + MGP_BALBcJ_P0024130 Angel2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024131.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507434 190525879 + MGP_BALBcJ_P0024131 Angel2 protein_coding protein_coding MGP_BALBcJ_T0024132.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507752 190516620 + MGP_BALBcJ_P0024132 Angel2 protein_coding protein_coding MGP_BALBcJ_T0024133.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507769 190525879 + Angel2 protein_coding processed_transcript MGP_BALBcJ_T0024134.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507774 190516395 + MGP_BALBcJ_P0024134 Angel2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024135.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190507776 190516923 + Angel2 protein_coding retained_intron MGP_BALBcJ_T0024136.1 MGP_BALBcJ_G0016870.1 mouse_genomes_project 1 190516169 190518187 + Angel2 protein_coding retained_intron MGP_BALBcJ_T0011943.1 MGP_BALBcJ_G0010040.1 mouse_genomes_project 1 31620684 31622317 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002814.1 MGP_BALBcJ_G0002662.1 mouse_genomes_project 1 72321339 72322045 + Gm28364 antisense antisense MGP_BALBcJ_T0009523.1 MGP_BALBcJ_G0007648.1 mouse_genomes_project 1 164702173 164702316 + Gm44458 miRNA miRNA MGP_BALBcJ_T0012281.1 MGP_BALBcJ_G0010378.1 mouse_genomes_project 1 160334043 160335245 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100362.1 MGP_BALBcJ_G0038398.1 mouse_genomes_project 1 93465111 93465221 - Gm23181 snoRNA snoRNA MGP_BALBcJ_T0102108.1 MGP_BALBcJ_G0039925.1 mouse_genomes_project 1 180490562 180490694 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0019471.1 MGP_BALBcJ_G0015902.1 mouse_genomes_project 1 37417114 37457372 + MGP_BALBcJ_P0019471 Il1r2 protein_coding protein_coding MGP_BALBcJ_T0019472.1 MGP_BALBcJ_G0015902.1 mouse_genomes_project 1 37428186 37471738 + MGP_BALBcJ_P0019472 Il1r2 protein_coding protein_coding MGP_BALBcJ_T0019473.1 MGP_BALBcJ_G0015902.1 mouse_genomes_project 1 37428280 37471726 + MGP_BALBcJ_P0019473 Il1r2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019474.1 MGP_BALBcJ_G0015902.1 mouse_genomes_project 1 37429473 37447672 + MGP_BALBcJ_P0019474 Il1r2 protein_coding protein_coding MGP_BALBcJ_T0005633.1 MGP_BALBcJ_G0004743.1 mouse_genomes_project 1 17767114 17777306 + lincRNA lincRNA MGP_BALBcJ_T0000653.1 MGP_BALBcJ_G0000589.1 mouse_genomes_project 1 137911606 137914078 + TEC TEC MGP_BALBcJ_T0019727.1 MGP_BALBcJ_G0015952.1 mouse_genomes_project 1 50517413 50551476 - MGP_BALBcJ_P0019727 1700019D03Rik protein_coding protein_coding MGP_BALBcJ_T0019728.1 MGP_BALBcJ_G0015952.1 mouse_genomes_project 1 50517413 50541522 - MGP_BALBcJ_P0019728 1700019D03Rik protein_coding protein_coding MGP_BALBcJ_T0019729.1 MGP_BALBcJ_G0015952.1 mouse_genomes_project 1 50517413 50541015 - MGP_BALBcJ_P0019729 1700019D03Rik protein_coding protein_coding MGP_BALBcJ_T0019730.1 MGP_BALBcJ_G0015952.1 mouse_genomes_project 1 50520264 50600814 - MGP_BALBcJ_P0019730 1700019D03Rik protein_coding protein_coding MGP_BALBcJ_T0019731.1 MGP_BALBcJ_G0015952.1 mouse_genomes_project 1 50520269 50561789 - MGP_BALBcJ_P0019731 1700019D03Rik protein_coding protein_coding MGP_BALBcJ_T0019732.1 MGP_BALBcJ_G0015952.1 mouse_genomes_project 1 50520279 50577162 - MGP_BALBcJ_P0019732 1700019D03Rik protein_coding protein_coding MGP_BALBcJ_T0011914.1 MGP_BALBcJ_G0010011.1 mouse_genomes_project 1 22787107 22787677 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099082.1 MGP_BALBcJ_G0037118.1 mouse_genomes_project 1 31223444 31223537 - Gm23792 snRNA snRNA MGP_BALBcJ_T0002805.1 MGP_BALBcJ_G0002660.1 mouse_genomes_project 1 69666481 69670955 + Apol7d antisense antisense MGP_BALBcJ_T0002806.1 MGP_BALBcJ_G0002660.1 mouse_genomes_project 1 69666532 69675547 + Apol7d antisense antisense MGP_BALBcJ_T0002807.1 MGP_BALBcJ_G0002660.1 mouse_genomes_project 1 69666979 69676337 + Apol7d antisense antisense MGP_BALBcJ_T0002808.1 MGP_BALBcJ_G0002660.1 mouse_genomes_project 1 69666983 69670743 + Apol7d antisense antisense MGP_BALBcJ_T0098434.1 MGP_BALBcJ_G0036488.1 mouse_genomes_project 1 148668940 148669049 - n-R5s218 rRNA rRNA MGP_BALBcJ_T0018899.1 MGP_BALBcJ_G0015784.1 mouse_genomes_project 1 11782544 11785189 - MGP_BALBcJ_P0018899 Msc protein_coding protein_coding MGP_BALBcJ_T0018900.1 MGP_BALBcJ_G0015784.1 mouse_genomes_project 1 11782944 11784552 - MGP_BALBcJ_P0018900 Msc protein_coding protein_coding MGP_BALBcJ_T0018901.1 MGP_BALBcJ_G0015784.1 mouse_genomes_project 1 11783133 11783864 - Msc protein_coding retained_intron MGP_BALBcJ_T0018902.1 MGP_BALBcJ_G0015784.1 mouse_genomes_project 1 11783965 11785191 - Msc protein_coding retained_intron MGP_BALBcJ_T0002901.1 MGP_BALBcJ_G0002731.1 mouse_genomes_project 1 155911839 155912198 + 4930439D14Rik antisense antisense MGP_BALBcJ_T0005905.1 MGP_BALBcJ_G0004953.1 mouse_genomes_project 1 138255690 138261271 + Gm34816 lincRNA lincRNA MGP_BALBcJ_T0016945.1 MGP_BALBcJ_G0015031.1 mouse_genomes_project 1 40080092 40086483 - Pantr2 processed_transcript lincRNA MGP_BALBcJ_T0016946.1 MGP_BALBcJ_G0015031.1 mouse_genomes_project 1 40080103 40081084 - Pantr2 processed_transcript TEC MGP_BALBcJ_T0011962.1 MGP_BALBcJ_G0010059.1 mouse_genomes_project 1 36593502 36593785 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000778.1 MGP_BALBcJ_G0000712.1 mouse_genomes_project 1 186623599 186625891 - TEC TEC MGP_BALBcJ_T0012220.1 MGP_BALBcJ_G0010317.1 mouse_genomes_project 1 135362796 135363164 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022673.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154151307 154198881 + MGP_BALBcJ_P0022673 Stx6 protein_coding protein_coding MGP_BALBcJ_T0022674.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154151311 154195166 + MGP_BALBcJ_P0022674 Stx6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022675.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154151340 154191477 + MGP_BALBcJ_P0022675 Stx6 protein_coding protein_coding MGP_BALBcJ_T0022676.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154151363 154184763 + Stx6 protein_coding processed_transcript MGP_BALBcJ_T0022677.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154151391 154171376 + Stx6 protein_coding retained_intron MGP_BALBcJ_T0022678.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154177582 154181589 + Stx6 protein_coding retained_intron MGP_BALBcJ_T0022679.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154180632 154195244 + Stx6 protein_coding retained_intron MGP_BALBcJ_T0022680.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154181076 154187004 + Stx6 protein_coding retained_intron MGP_BALBcJ_T0022681.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154184744 154201442 + MGP_BALBcJ_P0022681 Stx6 protein_coding protein_coding MGP_BALBcJ_T0022682.1 MGP_BALBcJ_G0016553.1 mouse_genomes_project 1 154188262 154195469 + Stx6 protein_coding processed_transcript MGP_BALBcJ_T0011235.1 MGP_BALBcJ_G0009360.1 mouse_genomes_project 1 164503708 164503959 - Gm23599 misc_RNA misc_RNA MGP_BALBcJ_T0021544.1 MGP_BALBcJ_G0016309.1 mouse_genomes_project 1 104446807 104490465 + MGP_BALBcJ_P0021544 Zcchc2 protein_coding protein_coding MGP_BALBcJ_T0021545.1 MGP_BALBcJ_G0016309.1 mouse_genomes_project 1 104447090 104490458 + MGP_BALBcJ_P0021545 Zcchc2 protein_coding protein_coding MGP_BALBcJ_T0021546.1 MGP_BALBcJ_G0016309.1 mouse_genomes_project 1 104460519 104488839 + MGP_BALBcJ_P0021546 Zcchc2 protein_coding protein_coding MGP_BALBcJ_T0021547.1 MGP_BALBcJ_G0016309.1 mouse_genomes_project 1 104460534 104483892 + MGP_BALBcJ_P0021547 Zcchc2 protein_coding protein_coding MGP_BALBcJ_T0021548.1 MGP_BALBcJ_G0016309.1 mouse_genomes_project 1 104468140 104479653 + MGP_BALBcJ_P0021548 Zcchc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021295.1 MGP_BALBcJ_G0016254.1 mouse_genomes_project 1 90880383 90885715 - MGP_BALBcJ_P0021295 Olfr1415 protein_coding protein_coding MGP_BALBcJ_T0021296.1 MGP_BALBcJ_G0016254.1 mouse_genomes_project 1 90880383 90881396 - MGP_BALBcJ_P0021296 Olfr1415 protein_coding protein_coding MGP_BALBcJ_T0021297.1 MGP_BALBcJ_G0016254.1 mouse_genomes_project 1 90880987 90885692 - MGP_BALBcJ_P0021297 Olfr1415 protein_coding protein_coding MGP_BALBcJ_T0002973.1 MGP_BALBcJ_G0002790.1 mouse_genomes_project 1 191411448 191413072 - Gm38037 antisense antisense MGP_BALBcJ_T0000776.1 MGP_BALBcJ_G0000710.1 mouse_genomes_project 1 185894808 185895920 + TEC TEC MGP_BALBcJ_T0102060.1 MGP_BALBcJ_G0039877.1 mouse_genomes_project 1 76467843 76468104 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012075.1 MGP_BALBcJ_G0010172.1 mouse_genomes_project 1 70030398 70030878 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005714.1 MGP_BALBcJ_G0004801.1 mouse_genomes_project 1 55216893 55235158 - 4930558J18Rik lincRNA lincRNA MGP_BALBcJ_T0000531.1 MGP_BALBcJ_G0000469.1 mouse_genomes_project 1 81179291 81180384 - TEC TEC MGP_BALBcJ_T0023075.1 MGP_BALBcJ_G0016623.1 mouse_genomes_project 1 163255742 163272628 + MGP_BALBcJ_P0023075 Slc19a2 protein_coding protein_coding MGP_BALBcJ_T0023076.1 MGP_BALBcJ_G0016623.1 mouse_genomes_project 1 163255751 163272612 + MGP_BALBcJ_P0023076 Slc19a2 protein_coding protein_coding MGP_BALBcJ_T0023077.1 MGP_BALBcJ_G0016623.1 mouse_genomes_project 1 163255949 163270761 + MGP_BALBcJ_P0023077 Slc19a2 protein_coding protein_coding MGP_BALBcJ_T0023078.1 MGP_BALBcJ_G0016623.1 mouse_genomes_project 1 163269595 163270694 + Slc19a2 protein_coding retained_intron MGP_BALBcJ_T0002875.1 MGP_BALBcJ_G0002709.1 mouse_genomes_project 1 132702215 132710750 + Gm15851 antisense antisense MGP_BALBcJ_T0102046.1 MGP_BALBcJ_G0039863.1 mouse_genomes_project 1 15270998 15284624 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100316.1 MGP_BALBcJ_G0038352.1 mouse_genomes_project 1 7980937 7981028 + Gm22963 snoRNA snoRNA MGP_BALBcJ_T0000400.1 MGP_BALBcJ_G0000339.1 mouse_genomes_project 1 22459907 22463276 - TEC TEC MGP_BALBcJ_T0009457.1 MGP_BALBcJ_G0007582.1 mouse_genomes_project 1 40417606 40417691 + Gm24001 miRNA miRNA MGP_BALBcJ_T0021239.1 MGP_BALBcJ_G0016243.1 mouse_genomes_project 1 89731452 89742853 + MGP_BALBcJ_P0021239 Klhl30 protein_coding protein_coding MGP_BALBcJ_T0021240.1 MGP_BALBcJ_G0016243.1 mouse_genomes_project 1 89731547 89752913 + MGP_BALBcJ_P0021240 Klhl30 protein_coding unknown_likely_coding MGP_BALBcJ_T0021601.1 MGP_BALBcJ_G0016327.1 mouse_genomes_project 1 110350009 110356075 - Dsel protein_coding processed_transcript MGP_BALBcJ_T0021602.1 MGP_BALBcJ_G0016327.1 mouse_genomes_project 1 110350013 110356225 - MGP_BALBcJ_P0021602 Dsel protein_coding protein_coding MGP_BALBcJ_T0021603.1 MGP_BALBcJ_G0016327.1 mouse_genomes_project 1 110354630 110356190 - Dsel protein_coding processed_transcript MGP_BALBcJ_T0021604.1 MGP_BALBcJ_G0016327.1 mouse_genomes_project 1 110355402 110356187 - Dsel protein_coding processed_transcript MGP_BALBcJ_T0000687.1 MGP_BALBcJ_G0000623.1 mouse_genomes_project 1 155647033 155647434 + TEC TEC MGP_BALBcJ_T0002854.1 MGP_BALBcJ_G0002695.1 mouse_genomes_project 1 120140139 120144040 - Gm15392 antisense antisense MGP_BALBcJ_T0000723.1 MGP_BALBcJ_G0000659.1 mouse_genomes_project 1 164473250 164474284 + TEC TEC MGP_BALBcJ_T0002954.1 MGP_BALBcJ_G0002773.1 mouse_genomes_project 1 184440280 184459666 + Gm38251 antisense antisense MGP_BALBcJ_T0100320.1 MGP_BALBcJ_G0038356.1 mouse_genomes_project 1 12731460 12731572 - Gm25227 snoRNA snoRNA MGP_BALBcJ_T0002988.1 MGP_BALBcJ_G0002799.1 mouse_genomes_project 1 194528584 194558455 - Gm16897 antisense antisense MGP_BALBcJ_T0009541.1 MGP_BALBcJ_G0007666.1 mouse_genomes_project 1 194389318 194389382 + Mir3962 miRNA miRNA MGP_BALBcJ_T0012285.1 MGP_BALBcJ_G0010382.1 mouse_genomes_project 1 161664162 161664882 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022307.1 MGP_BALBcJ_G0016478.1 mouse_genomes_project 1 134889105 134956009 + MGP_BALBcJ_P0022307 Cacna1s protein_coding protein_coding MGP_BALBcJ_T0022308.1 MGP_BALBcJ_G0016478.1 mouse_genomes_project 1 134889139 134956014 + MGP_BALBcJ_P0022308 Cacna1s protein_coding protein_coding MGP_BALBcJ_T0022309.1 MGP_BALBcJ_G0016478.1 mouse_genomes_project 1 134889256 134956301 + MGP_BALBcJ_P0022309 Cacna1s protein_coding protein_coding MGP_BALBcJ_T0022310.1 MGP_BALBcJ_G0016478.1 mouse_genomes_project 1 134909877 134956008 + MGP_BALBcJ_P0022310 Cacna1s protein_coding protein_coding MGP_BALBcJ_T0022311.1 MGP_BALBcJ_G0016478.1 mouse_genomes_project 1 134941849 134948498 + Cacna1s protein_coding retained_intron MGP_BALBcJ_T0022312.1 MGP_BALBcJ_G0016478.1 mouse_genomes_project 1 134953734 134956008 + Cacna1s protein_coding processed_transcript MGP_BALBcJ_T0102058.1 MGP_BALBcJ_G0039875.1 mouse_genomes_project 1 63418661 63418829 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012174.1 MGP_BALBcJ_G0010271.1 mouse_genomes_project 1 115138551 115138946 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022497.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149322346 149379267 + MGP_BALBcJ_P0022497 Tpr protein_coding protein_coding MGP_BALBcJ_T0022498.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149322758 149379387 + MGP_BALBcJ_P0022498 Tpr protein_coding protein_coding MGP_BALBcJ_T0022499.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149322892 149325004 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022500.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149341450 149343417 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022501.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149344241 149345857 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022502.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149354192 149357807 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022503.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149358817 149369767 + MGP_BALBcJ_P0022503 Tpr protein_coding protein_coding MGP_BALBcJ_T0022504.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149359877 149369764 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022505.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149366883 149372674 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022506.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149368383 149379379 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022507.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149369648 149379379 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022508.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149375369 149379379 + MGP_BALBcJ_P0022508 Tpr protein_coding protein_coding MGP_BALBcJ_T0022509.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149376906 149379381 + Tpr protein_coding retained_intron MGP_BALBcJ_T0022510.1 MGP_BALBcJ_G0016518.1 mouse_genomes_project 1 149378322 149379243 + Tpr protein_coding processed_transcript MGP_BALBcJ_T0021363.1 MGP_BALBcJ_G0016272.1 mouse_genomes_project 1 91545393 91554994 - MGP_BALBcJ_P0021363 2310007B03Rik protein_coding protein_coding MGP_BALBcJ_T0021364.1 MGP_BALBcJ_G0016272.1 mouse_genomes_project 1 91545627 91554916 - MGP_BALBcJ_P0021364 2310007B03Rik protein_coding protein_coding MGP_BALBcJ_T0005789.1 MGP_BALBcJ_G0004856.1 mouse_genomes_project 1 83892087 83901653 + 9930111H07Rik lincRNA lincRNA MGP_BALBcJ_T0100382.1 MGP_BALBcJ_G0038418.1 mouse_genomes_project 1 136218443 136218540 - Gm23534 snoRNA snoRNA MGP_BALBcJ_T0023576.1 MGP_BALBcJ_G0016738.1 mouse_genomes_project 1 172072153 172073589 + MGP_BALBcJ_P0023576 Olfr16 protein_coding protein_coding MGP_BALBcJ_T0005865.1 MGP_BALBcJ_G0004919.1 mouse_genomes_project 1 120000155 120004419 - 2210011K15Rik lincRNA lincRNA MGP_BALBcJ_T0021932.1 MGP_BALBcJ_G0016399.1 mouse_genomes_project 1 130411303 130440383 + MGP_BALBcJ_P0021932 Ctse protein_coding protein_coding MGP_BALBcJ_T0021933.1 MGP_BALBcJ_G0016399.1 mouse_genomes_project 1 130411491 130440381 + MGP_BALBcJ_P0021933 Ctse protein_coding protein_coding MGP_BALBcJ_T0021934.1 MGP_BALBcJ_G0016399.1 mouse_genomes_project 1 130426642 130430176 + Ctse protein_coding retained_intron MGP_BALBcJ_T0019424.1 MGP_BALBcJ_G0015891.1 mouse_genomes_project 1 36251056 36262208 + MGP_BALBcJ_P0019424 Nms protein_coding protein_coding MGP_BALBcJ_T0019425.1 MGP_BALBcJ_G0015891.1 mouse_genomes_project 1 36251110 36260540 + MGP_BALBcJ_P0019425 Nms protein_coding protein_coding MGP_BALBcJ_T0011973.1 MGP_BALBcJ_G0010070.1 mouse_genomes_project 1 41403653 41403833 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019413.1 MGP_BALBcJ_G0015889.1 mouse_genomes_project 1 36097561 36138999 - MGP_BALBcJ_P0019413 Lonrf2 protein_coding protein_coding MGP_BALBcJ_T0019414.1 MGP_BALBcJ_G0015889.1 mouse_genomes_project 1 36098414 36123959 - MGP_BALBcJ_P0019414 Lonrf2 protein_coding protein_coding MGP_BALBcJ_T0019415.1 MGP_BALBcJ_G0015889.1 mouse_genomes_project 1 36137767 36138945 - Lonrf2 protein_coding retained_intron MGP_BALBcJ_T0023231.1 MGP_BALBcJ_G0016657.1 mouse_genomes_project 1 166597542 166640545 + MGP_BALBcJ_P0023231 Rxrg protein_coding protein_coding MGP_BALBcJ_T0005912.1 MGP_BALBcJ_G0004959.1 mouse_genomes_project 1 150080702 150085014 + C730036E19Rik lincRNA lincRNA MGP_BALBcJ_T0000519.1 MGP_BALBcJ_G0000457.1 mouse_genomes_project 1 77797774 77799599 + TEC TEC MGP_BALBcJ_T0100359.1 MGP_BALBcJ_G0038395.1 mouse_genomes_project 1 84480052 84480132 - Gm24148 snoRNA snoRNA MGP_BALBcJ_T0011886.1 MGP_BALBcJ_G0009983.1 mouse_genomes_project 1 14447695 14448167 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020949.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185086 84191476 + Psmd1 protein_coding retained_intron MGP_BALBcJ_T0020950.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185086 84192360 + Psmd1 protein_coding processed_transcript MGP_BALBcJ_T0020951.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185318 84254439 + MGP_BALBcJ_P0020951 Psmd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020952.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185318 84260627 + MGP_BALBcJ_P0020952 Psmd1 protein_coding protein_coding MGP_BALBcJ_T0020953.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185340 84188362 + Psmd1 protein_coding retained_intron MGP_BALBcJ_T0020954.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185391 84192984 + Psmd1 protein_coding retained_intron MGP_BALBcJ_T0020955.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84185570 84196827 + Psmd1 protein_coding processed_transcript MGP_BALBcJ_T0020958.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84232225 84254490 + Psmd1 protein_coding processed_transcript MGP_BALBcJ_T0020959.1 MGP_BALBcJ_G0016179.1 mouse_genomes_project 1 84249609 84254457 + Psmd1 protein_coding retained_intron MGP_BALBcJ_T0000682.1 MGP_BALBcJ_G0000618.1 mouse_genomes_project 1 154973475 154974684 + TEC TEC MGP_BALBcJ_T0000576.1 MGP_BALBcJ_G0000514.1 mouse_genomes_project 1 105063778 105065872 - TEC TEC MGP_BALBcJ_T0000456.1 MGP_BALBcJ_G0000394.1 mouse_genomes_project 1 41917668 41922231 + TEC TEC MGP_BALBcJ_T0006038.1 MGP_BALBcJ_G0005057.1 mouse_genomes_project 1 194570612 194576896 - Gm32250 lincRNA lincRNA MGP_BALBcJ_T0002783.1 MGP_BALBcJ_G0002643.1 mouse_genomes_project 1 50781868 50783451 + Gm28777 antisense antisense MGP_BALBcJ_T0020800.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78536399 78788036 - MGP_BALBcJ_P0020800 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020801.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78536514 78629570 - MGP_BALBcJ_P0020801 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020802.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78536879 78702262 - MGP_BALBcJ_P0020802 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020803.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78536967 78566383 - MGP_BALBcJ_P0020803 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020804.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78537039 78702228 - MGP_BALBcJ_P0020804 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020805.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78538217 78541635 - Dock10 protein_coding retained_intron MGP_BALBcJ_T0020806.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78556127 78558015 - Dock10 protein_coding retained_intron MGP_BALBcJ_T0020807.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78619923 78788115 - Dock10 protein_coding retained_intron MGP_BALBcJ_T0020808.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78623035 78738998 - MGP_BALBcJ_P0020808 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020809.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78629338 78702245 - MGP_BALBcJ_P0020809 Dock10 protein_coding protein_coding MGP_BALBcJ_T0020810.1 MGP_BALBcJ_G0016149.1 mouse_genomes_project 1 78682571 78788075 - Dock10 protein_coding retained_intron MGP_BALBcJ_T0018708.1 MGP_BALBcJ_G0015755.1 mouse_genomes_project 1 2938420 2942118 - MGP_BALBcJ_P0018708 Npbwr1 protein_coding protein_coding MGP_BALBcJ_T0002809.1 MGP_BALBcJ_G0002661.1 mouse_genomes_project 1 71015762 71057687 + 1700027A15Rik antisense antisense MGP_BALBcJ_T0002810.1 MGP_BALBcJ_G0002661.1 mouse_genomes_project 1 71049312 71058470 + 1700027A15Rik antisense antisense MGP_BALBcJ_T0002811.1 MGP_BALBcJ_G0002661.1 mouse_genomes_project 1 71049657 71058461 + 1700027A15Rik antisense antisense MGP_BALBcJ_T0002812.1 MGP_BALBcJ_G0002661.1 mouse_genomes_project 1 71055516 71058462 + 1700027A15Rik antisense antisense MGP_BALBcJ_T0002813.1 MGP_BALBcJ_G0002661.1 mouse_genomes_project 1 71057531 71058470 + 1700027A15Rik antisense antisense MGP_BALBcJ_T0102111.1 MGP_BALBcJ_G0039928.1 mouse_genomes_project 1 180978355 180979033 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005811.1 MGP_BALBcJ_G0004877.1 mouse_genomes_project 1 89859540 89861291 + Gm28382 lincRNA lincRNA MGP_BALBcJ_T0000426.1 MGP_BALBcJ_G0000365.1 mouse_genomes_project 1 30853332 30856197 - TEC TEC MGP_BALBcJ_T0020430.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72415485 72425853 + MGP_BALBcJ_P0020430 Slc11a1 protein_coding protein_coding MGP_BALBcJ_T0020431.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72415493 72426150 + Slc11a1 protein_coding retained_intron MGP_BALBcJ_T0020432.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72415493 72426160 + MGP_BALBcJ_P0020432 Slc11a1 protein_coding protein_coding MGP_BALBcJ_T0020433.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72415515 72426149 + Slc11a1 protein_coding retained_intron MGP_BALBcJ_T0020434.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72415543 72422015 + Slc11a1 protein_coding processed_transcript MGP_BALBcJ_T0020435.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72415862 72417181 + Slc11a1 protein_coding processed_transcript MGP_BALBcJ_T0020436.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72416947 72420121 + Slc11a1 protein_coding processed_transcript MGP_BALBcJ_T0020437.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72421839 72424271 + Slc11a1 protein_coding retained_intron MGP_BALBcJ_T0020438.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72423131 72423932 + Slc11a1 protein_coding retained_intron MGP_BALBcJ_T0020439.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72423438 72424271 + Slc11a1 protein_coding processed_transcript MGP_BALBcJ_T0020440.1 MGP_BALBcJ_G0016087.1 mouse_genomes_project 1 72423697 72425295 + Slc11a1 protein_coding processed_transcript MGP_BALBcJ_T0012072.1 MGP_BALBcJ_G0010169.1 mouse_genomes_project 1 69158515 69159290 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012207.1 MGP_BALBcJ_G0010304.1 mouse_genomes_project 1 127230164 127230471 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005738.1 MGP_BALBcJ_G0004820.1 mouse_genomes_project 1 62639826 62642648 + Gm29152 lincRNA lincRNA MGP_BALBcJ_T0005619.1 MGP_BALBcJ_G0004733.1 mouse_genomes_project 1 4550032 4573135 + Gm30414 lincRNA lincRNA MGP_BALBcJ_T0011242.1 MGP_BALBcJ_G0009367.1 mouse_genomes_project 1 194428171 194428465 + Gm23885 misc_RNA misc_RNA MGP_BALBcJ_T0021006.1 MGP_BALBcJ_G0016192.1 mouse_genomes_project 1 85233690 85236908 - MGP_BALBcJ_P0021006 Alppl2 protein_coding protein_coding MGP_BALBcJ_T0021007.1 MGP_BALBcJ_G0016192.1 mouse_genomes_project 1 85233691 85236925 - MGP_BALBcJ_P0021007 Alppl2 protein_coding protein_coding MGP_BALBcJ_T0021008.1 MGP_BALBcJ_G0016192.1 mouse_genomes_project 1 85235776 85236802 - Alppl2 protein_coding retained_intron MGP_BALBcJ_T0012255.1 MGP_BALBcJ_G0010352.1 mouse_genomes_project 1 149478455 149478815 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011844.1 MGP_BALBcJ_G0009941.1 mouse_genomes_project 1 3956832 3957496 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016951.1 MGP_BALBcJ_G0015035.1 mouse_genomes_project 1 54828698 54832475 + 9130024F11Rik processed_transcript antisense MGP_BALBcJ_T0016952.1 MGP_BALBcJ_G0015035.1 mouse_genomes_project 1 54828759 54830889 + 9130024F11Rik processed_transcript antisense MGP_BALBcJ_T0016953.1 MGP_BALBcJ_G0015035.1 mouse_genomes_project 1 54828761 54903317 + 9130024F11Rik processed_transcript antisense MGP_BALBcJ_T0016954.1 MGP_BALBcJ_G0015035.1 mouse_genomes_project 1 54829613 54832471 + 9130024F11Rik processed_transcript TEC MGP_BALBcJ_T0016955.1 MGP_BALBcJ_G0015035.1 mouse_genomes_project 1 54901195 54910886 + 9130024F11Rik processed_transcript antisense MGP_BALBcJ_T0000342.1 MGP_BALBcJ_G0000283.1 mouse_genomes_project 1 78405 79475 + TEC TEC MGP_BALBcJ_T0012294.1 MGP_BALBcJ_G0010391.1 mouse_genomes_project 1 164952639 164954548 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021154.1 MGP_BALBcJ_G0016227.1 mouse_genomes_project 1 87800140 88253984 + MGP_BALBcJ_P0021154 Agap1 protein_coding protein_coding MGP_BALBcJ_T0021155.1 MGP_BALBcJ_G0016227.1 mouse_genomes_project 1 87800208 88246368 + MGP_BALBcJ_P0021155 Agap1 protein_coding protein_coding MGP_BALBcJ_T0021156.1 MGP_BALBcJ_G0016227.1 mouse_genomes_project 1 87800590 87804963 + Agap1 protein_coding retained_intron MGP_BALBcJ_T0021157.1 MGP_BALBcJ_G0016227.1 mouse_genomes_project 1 87925505 88251644 + MGP_BALBcJ_P0021157 Agap1 protein_coding protein_coding MGP_BALBcJ_T0021158.1 MGP_BALBcJ_G0016227.1 mouse_genomes_project 1 87926016 88245261 + MGP_BALBcJ_P0021158 Agap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0000775.1 MGP_BALBcJ_G0000709.1 mouse_genomes_project 1 185723076 185723564 + TEC TEC MGP_BALBcJ_T0019891.1 MGP_BALBcJ_G0015986.1 mouse_genomes_project 1 56143749 56238019 + MGP_BALBcJ_P0019891 Aox2 protein_coding protein_coding MGP_BALBcJ_T0005995.1 MGP_BALBcJ_G0005024.1 mouse_genomes_project 1 183047960 183048494 + Gm33973 lincRNA lincRNA MGP_BALBcJ_T0011971.1 MGP_BALBcJ_G0010068.1 mouse_genomes_project 1 41275928 41276473 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012195.1 MGP_BALBcJ_G0010292.1 mouse_genomes_project 1 121476759 121477136 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000677.1 MGP_BALBcJ_G0000613.1 mouse_genomes_project 1 152439644 152440464 + TEC TEC MGP_BALBcJ_T0023523.1 MGP_BALBcJ_G0016724.1 mouse_genomes_project 1 171384368 171410668 - MGP_BALBcJ_P0023523 Atp1a2 protein_coding protein_coding MGP_BALBcJ_T0023524.1 MGP_BALBcJ_G0016724.1 mouse_genomes_project 1 171387211 171410668 - Atp1a2 protein_coding retained_intron MGP_BALBcJ_T0023525.1 MGP_BALBcJ_G0016724.1 mouse_genomes_project 1 171388565 171389100 - Atp1a2 protein_coding retained_intron MGP_BALBcJ_T0023526.1 MGP_BALBcJ_G0016724.1 mouse_genomes_project 1 171390719 171410668 - MGP_BALBcJ_P0023526 Atp1a2 protein_coding protein_coding MGP_BALBcJ_T0023527.1 MGP_BALBcJ_G0016724.1 mouse_genomes_project 1 171396866 171410668 - Atp1a2 protein_coding retained_intron MGP_BALBcJ_T0019040.1 MGP_BALBcJ_G0015822.1 mouse_genomes_project 1 20895292 20949757 + MGP_BALBcJ_P0019040 B3gat2 protein_coding protein_coding MGP_BALBcJ_T0019041.1 MGP_BALBcJ_G0015822.1 mouse_genomes_project 1 20895916 20982895 + MGP_BALBcJ_P0019041 B3gat2 protein_coding protein_coding MGP_BALBcJ_T0011839.1 MGP_BALBcJ_G0009936.1 mouse_genomes_project 1 2298247 2299099 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012133.1 MGP_BALBcJ_G0010230.1 mouse_genomes_project 1 99081284 99081641 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021170.1 MGP_BALBcJ_G0016231.1 mouse_genomes_project 1 88564870 88577645 + MGP_BALBcJ_P0021170 Ackr3 protein_coding protein_coding MGP_BALBcJ_T0021171.1 MGP_BALBcJ_G0016231.1 mouse_genomes_project 1 88564896 88574727 + MGP_BALBcJ_P0021171 Ackr3 protein_coding protein_coding MGP_BALBcJ_T0005957.1 MGP_BALBcJ_G0004993.1 mouse_genomes_project 1 165015034 165050633 + Gm26665 lincRNA lincRNA MGP_BALBcJ_T0002833.1 MGP_BALBcJ_G0002680.1 mouse_genomes_project 1 90179027 90183432 - Gm29100 antisense antisense MGP_BALBcJ_T0011958.1 MGP_BALBcJ_G0010055.1 mouse_genomes_project 1 34786850 34788640 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011858.1 MGP_BALBcJ_G0009955.1 mouse_genomes_project 1 5843908 5844106 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005838.1 MGP_BALBcJ_G0004900.1 mouse_genomes_project 1 106214081 106220590 + Gm15389 lincRNA lincRNA MGP_BALBcJ_T0012108.1 MGP_BALBcJ_G0010205.1 mouse_genomes_project 1 86230084 86231666 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000720.1 MGP_BALBcJ_G0000656.1 mouse_genomes_project 1 163587590 163590679 + TEC TEC MGP_BALBcJ_T0005644.1 MGP_BALBcJ_G0004753.1 mouse_genomes_project 1 27979547 27980950 - Gm9898 lincRNA lincRNA MGP_BALBcJ_T0000644.1 MGP_BALBcJ_G0000580.1 mouse_genomes_project 1 136780760 136782914 + TEC TEC MGP_BALBcJ_T0023446.1 MGP_BALBcJ_G0016706.1 mouse_genomes_project 1 170652392 170694170 + MGP_BALBcJ_P0023446 Cd244 protein_coding protein_coding MGP_BALBcJ_T0023447.1 MGP_BALBcJ_G0016706.1 mouse_genomes_project 1 170652393 170687150 + Cd244 protein_coding retained_intron MGP_BALBcJ_T0023448.1 MGP_BALBcJ_G0016706.1 mouse_genomes_project 1 170687966 170694170 + Cd244 protein_coding retained_intron MGP_BALBcJ_T0019583.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41533584 41535363 + Ercc5 protein_coding retained_intron MGP_BALBcJ_T0019584.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41533687 41567523 + Ercc5 protein_coding retained_intron MGP_BALBcJ_T0019585.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41533687 41567523 + MGP_BALBcJ_P0019585 Ercc5 protein_coding protein_coding MGP_BALBcJ_T0019586.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41533749 41547915 + Ercc5 protein_coding processed_transcript MGP_BALBcJ_T0019587.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41533772 41544326 + Ercc5 protein_coding processed_transcript MGP_BALBcJ_T0019588.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41543005 41553069 + Ercc5 protein_coding retained_intron MGP_BALBcJ_T0019589.1 MGP_BALBcJ_G0015927.1 mouse_genomes_project 1 41544900 41553288 + Ercc5 protein_coding retained_intron MGP_BALBcJ_T0024169.1 MGP_BALBcJ_G0016879.1 mouse_genomes_project 1 190889858 190901672 - MGP_BALBcJ_P0024169 Nenf protein_coding protein_coding MGP_BALBcJ_T0018768.1 MGP_BALBcJ_G0015765.1 mouse_genomes_project 1 6765610 6794946 - MGP_BALBcJ_P0018768 Vcpip1 protein_coding protein_coding MGP_BALBcJ_T0012189.1 MGP_BALBcJ_G0010286.1 mouse_genomes_project 1 119474297 119474507 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009501.1 MGP_BALBcJ_G0007626.1 mouse_genomes_project 1 105002183 105002319 - Mir3473f miRNA miRNA MGP_BALBcJ_T0016962.1 MGP_BALBcJ_G0015039.1 mouse_genomes_project 1 73155522 73168945 - Gm29253 processed_transcript processed_transcript MGP_BALBcJ_T0002759.1 MGP_BALBcJ_G0002624.1 mouse_genomes_project 1 34628875 34633349 - 4930439A04Rik antisense antisense MGP_BALBcJ_T0002760.1 MGP_BALBcJ_G0002624.1 mouse_genomes_project 1 34632731 34633365 - 4930439A04Rik antisense antisense MGP_BALBcJ_T0005771.1 MGP_BALBcJ_G0004842.1 mouse_genomes_project 1 74900658 75041984 - Gm816 lincRNA lincRNA MGP_BALBcJ_T0017004.1 MGP_BALBcJ_G0015053.1 mouse_genomes_project 1 145686211 145689293 - A230059L01Rik processed_transcript antisense MGP_BALBcJ_T0017005.1 MGP_BALBcJ_G0015053.1 mouse_genomes_project 1 145687983 145690624 - A230059L01Rik processed_transcript TEC MGP_BALBcJ_T0000524.1 MGP_BALBcJ_G0000462.1 mouse_genomes_project 1 78702961 78706517 - TEC TEC MGP_BALBcJ_T0020818.1 MGP_BALBcJ_G0016153.1 mouse_genomes_project 1 80352452 80470732 + MGP_BALBcJ_P0020818 Rhbdd1 protein_coding protein_coding MGP_BALBcJ_T0020819.1 MGP_BALBcJ_G0016153.1 mouse_genomes_project 1 80352642 80355732 + Rhbdd1 protein_coding retained_intron MGP_BALBcJ_T0020820.1 MGP_BALBcJ_G0016153.1 mouse_genomes_project 1 80375033 80470732 + MGP_BALBcJ_P0020820 Rhbdd1 protein_coding protein_coding MGP_BALBcJ_T0019745.1 MGP_BALBcJ_G0015956.1 mouse_genomes_project 1 50877367 50882220 + Ormdl1 protein_coding retained_intron MGP_BALBcJ_T0019746.1 MGP_BALBcJ_G0015956.1 mouse_genomes_project 1 50877367 50894276 + MGP_BALBcJ_P0019746 Ormdl1 protein_coding protein_coding MGP_BALBcJ_T0020371.1 MGP_BALBcJ_G0016075.1 mouse_genomes_project 1 70892889 70909875 - MGP_BALBcJ_P0020371 Igfbp5 protein_coding protein_coding MGP_BALBcJ_T0020372.1 MGP_BALBcJ_G0016075.1 mouse_genomes_project 1 70893022 70909266 - Igfbp5 protein_coding processed_transcript MGP_BALBcJ_T0011898.1 MGP_BALBcJ_G0009995.1 mouse_genomes_project 1 18047194 18048395 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005807.1 MGP_BALBcJ_G0004873.1 mouse_genomes_project 1 89042595 89047228 + Gm9991 lincRNA lincRNA MGP_BALBcJ_T0005630.1 MGP_BALBcJ_G0004740.1 mouse_genomes_project 1 14219214 14223915 + Gm28784 lincRNA lincRNA MGP_BALBcJ_T0005662.1 MGP_BALBcJ_G0004769.1 mouse_genomes_project 1 35439217 35466984 + Gm5099 lincRNA lincRNA MGP_BALBcJ_T0012338.1 MGP_BALBcJ_G0010435.1 mouse_genomes_project 1 188630100 188631332 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019114.1 MGP_BALBcJ_G0015838.1 mouse_genomes_project 1 29765054 29767447 - MGP_BALBcJ_P0019114 protein_coding protein_coding MGP_BALBcJ_T0000799.1 MGP_BALBcJ_G0000732.1 mouse_genomes_project 1 194294520 194295052 + TEC TEC MGP_BALBcJ_T0000386.1 MGP_BALBcJ_G0000327.1 mouse_genomes_project 1 13683673 13686653 + TEC TEC MGP_BALBcJ_T0012340.1 MGP_BALBcJ_G0010437.1 mouse_genomes_project 1 189380716 189380978 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012142.1 MGP_BALBcJ_G0010239.1 mouse_genomes_project 1 103090275 103091045 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000350.1 MGP_BALBcJ_G0000291.1 mouse_genomes_project 1 1406108 1407592 - TEC TEC MGP_BALBcJ_T0012245.1 MGP_BALBcJ_G0010342.1 mouse_genomes_project 1 146950097 146950556 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002831.1 MGP_BALBcJ_G0002678.1 mouse_genomes_project 1 86677297 86682739 - 4930453O03Rik antisense antisense MGP_BALBcJ_T0000648.1 MGP_BALBcJ_G0000584.1 mouse_genomes_project 1 137109382 137109802 + TEC TEC MGP_BALBcJ_T0005759.1 MGP_BALBcJ_G0004834.1 mouse_genomes_project 1 71433358 71461699 + D530049I02Rik lincRNA lincRNA MGP_BALBcJ_T0019337.1 MGP_BALBcJ_G0015875.1 mouse_genomes_project 1 34717682 34731076 - MGP_BALBcJ_P0019337 Coa5 protein_coding protein_coding MGP_BALBcJ_T0019338.1 MGP_BALBcJ_G0015875.1 mouse_genomes_project 1 34729484 34730973 - Coa5 protein_coding retained_intron MGP_BALBcJ_T0009493.1 MGP_BALBcJ_G0007618.1 mouse_genomes_project 1 91672240 91672302 + Mir6901 miRNA miRNA MGP_BALBcJ_T0024199.1 MGP_BALBcJ_G0016886.1 mouse_genomes_project 1 191497424 191503903 + MGP_BALBcJ_P0024199 Slc30a1 protein_coding protein_coding MGP_BALBcJ_T0024200.1 MGP_BALBcJ_G0016886.1 mouse_genomes_project 1 191497913 191499832 + MGP_BALBcJ_P0024200 Slc30a1 protein_coding protein_coding MGP_BALBcJ_T0000494.1 MGP_BALBcJ_G0000432.1 mouse_genomes_project 1 64736150 64738727 - TEC TEC MGP_BALBcJ_T0023034.1 MGP_BALBcJ_G0016610.1 mouse_genomes_project 1 161974097 162003344 - MGP_BALBcJ_P0023034 Fmo3 protein_coding protein_coding MGP_BALBcJ_T0023035.1 MGP_BALBcJ_G0016610.1 mouse_genomes_project 1 161987310 162003345 - Fmo3 protein_coding retained_intron MGP_BALBcJ_T0023064.1 MGP_BALBcJ_G0016619.1 mouse_genomes_project 1 163058714 163068131 + MGP_BALBcJ_P0023064 Sele protein_coding protein_coding MGP_BALBcJ_T0011873.1 MGP_BALBcJ_G0009970.1 mouse_genomes_project 1 9138170 9139043 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005697.1 MGP_BALBcJ_G0004788.1 mouse_genomes_project 1 48426406 48428733 + Gm28321 lincRNA lincRNA MGP_BALBcJ_T0005660.1 MGP_BALBcJ_G0004767.1 mouse_genomes_project 1 33617164 33617880 + 4930403P22Rik lincRNA lincRNA MGP_BALBcJ_T0022173.1 MGP_BALBcJ_G0016451.1 mouse_genomes_project 1 133253185 133264197 + Klhl12 protein_coding retained_intron MGP_BALBcJ_T0022174.1 MGP_BALBcJ_G0016451.1 mouse_genomes_project 1 133253185 133288421 + MGP_BALBcJ_P0022174 Klhl12 protein_coding protein_coding MGP_BALBcJ_T0022175.1 MGP_BALBcJ_G0016451.1 mouse_genomes_project 1 133253185 133288566 + MGP_BALBcJ_P0022175 Klhl12 protein_coding protein_coding MGP_BALBcJ_T0022176.1 MGP_BALBcJ_G0016451.1 mouse_genomes_project 1 133253209 133288421 + MGP_BALBcJ_P0022176 Klhl12 protein_coding protein_coding MGP_BALBcJ_T0022177.1 MGP_BALBcJ_G0016451.1 mouse_genomes_project 1 133266235 133271219 + Klhl12 protein_coding retained_intron MGP_BALBcJ_T0022178.1 MGP_BALBcJ_G0016451.1 mouse_genomes_project 1 133272630 133283316 + Klhl12 protein_coding retained_intron MGP_BALBcJ_T0023794.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179664341 179692583 - MGP_BALBcJ_P0023794 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023795.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179664341 179695118 - MGP_BALBcJ_P0023795 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023796.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179666122 179695036 - MGP_BALBcJ_P0023796 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023797.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179666254 179677735 - MGP_BALBcJ_P0023797 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023798.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179666494 179695079 - MGP_BALBcJ_P0023798 Coq8a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023799.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179669226 179695059 - MGP_BALBcJ_P0023799 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023800.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179669233 179681201 - MGP_BALBcJ_P0023800 Coq8a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023801.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179670308 179678026 - Coq8a protein_coding retained_intron MGP_BALBcJ_T0023802.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678110 179695059 - MGP_BALBcJ_P0023802 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023803.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678175 179692581 - MGP_BALBcJ_P0023803 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023804.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678212 179695173 - MGP_BALBcJ_P0023804 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023805.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678239 179681904 - MGP_BALBcJ_P0023805 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023806.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678245 179695070 - MGP_BALBcJ_P0023806 Coq8a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023807.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678248 179692760 - MGP_BALBcJ_P0023807 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023808.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678299 179695070 - MGP_BALBcJ_P0023808 Coq8a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023809.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179678351 179698581 - MGP_BALBcJ_P0023809 Coq8a protein_coding protein_coding MGP_BALBcJ_T0023810.1 MGP_BALBcJ_G0016803.1 mouse_genomes_project 1 179681276 179695000 - MGP_BALBcJ_P0023810 Coq8a protein_coding protein_coding MGP_BALBcJ_T0019590.1 MGP_BALBcJ_G0015928.1 mouse_genomes_project 1 41591044 41605921 - MGP_BALBcJ_P0019590 Mettl21e protein_coding protein_coding MGP_BALBcJ_T0019591.1 MGP_BALBcJ_G0015928.1 mouse_genomes_project 1 41593417 41605873 - Mettl21e protein_coding retained_intron MGP_BALBcJ_T0021875.1 MGP_BALBcJ_G0016384.1 mouse_genomes_project 1 129567173 129580978 + MGP_BALBcJ_P0021875 Fcamr protein_coding protein_coding MGP_BALBcJ_T0021876.1 MGP_BALBcJ_G0016384.1 mouse_genomes_project 1 129567173 129580946 + MGP_BALBcJ_P0021876 Fcamr protein_coding protein_coding MGP_BALBcJ_T0009509.1 MGP_BALBcJ_G0007634.1 mouse_genomes_project 1 133611787 133611879 + Gm22232 miRNA miRNA MGP_BALBcJ_T0021459.1 MGP_BALBcJ_G0016290.1 mouse_genomes_project 1 92272638 92390445 + MGP_BALBcJ_P0021459 protein_coding protein_coding MGP_BALBcJ_T0021462.1 MGP_BALBcJ_G0016290.1 mouse_genomes_project 1 92282546 92307743 + MGP_BALBcJ_P0021462 protein_coding protein_coding MGP_BALBcJ_T0012122.1 MGP_BALBcJ_G0010219.1 mouse_genomes_project 1 93677085 93677933 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002860.1 MGP_BALBcJ_G0002700.1 mouse_genomes_project 1 129509515 129510681 - Gm28857 antisense antisense MGP_BALBcJ_T0023280.1 MGP_BALBcJ_G0016672.1 mouse_genomes_project 1 169309703 169313026 + MGP_BALBcJ_P0023280 1700015E13Rik protein_coding protein_coding MGP_BALBcJ_T0021161.1 MGP_BALBcJ_G0016229.1 mouse_genomes_project 1 88307570 88372815 - MGP_BALBcJ_P0021161 Asb18 protein_coding protein_coding MGP_BALBcJ_T0021162.1 MGP_BALBcJ_G0016229.1 mouse_genomes_project 1 88309701 88372785 - MGP_BALBcJ_P0021162 Asb18 protein_coding protein_coding MGP_BALBcJ_T0021163.1 MGP_BALBcJ_G0016229.1 mouse_genomes_project 1 88309788 88372696 - MGP_BALBcJ_P0021163 Asb18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021164.1 MGP_BALBcJ_G0016229.1 mouse_genomes_project 1 88309789 88372696 - MGP_BALBcJ_P0021164 Asb18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012059.1 MGP_BALBcJ_G0010156.1 mouse_genomes_project 1 63461727 63462035 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000461.1 MGP_BALBcJ_G0000399.1 mouse_genomes_project 1 49126772 49129141 - TEC TEC MGP_BALBcJ_T0100394.1 MGP_BALBcJ_G0038430.1 mouse_genomes_project 1 160060955 160061017 + Gm22489 snoRNA snoRNA MGP_BALBcJ_T0022430.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142577683 142619115 + Glrx2 protein_coding retained_intron MGP_BALBcJ_T0022431.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611390 142619117 + MGP_BALBcJ_P0022431 Glrx2 protein_coding protein_coding MGP_BALBcJ_T0022432.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611918 142615080 + Glrx2 protein_coding processed_transcript MGP_BALBcJ_T0022433.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611918 142621742 + MGP_BALBcJ_P0022433 Glrx2 protein_coding protein_coding MGP_BALBcJ_T0022434.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611927 142615446 + Glrx2 protein_coding retained_intron MGP_BALBcJ_T0022435.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611971 142615183 + Glrx2 protein_coding processed_transcript MGP_BALBcJ_T0022436.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611976 142619117 + MGP_BALBcJ_P0022436 Glrx2 protein_coding protein_coding MGP_BALBcJ_T0022437.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142611979 142617940 + MGP_BALBcJ_P0022437 Glrx2 protein_coding protein_coding MGP_BALBcJ_T0022438.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142612007 142619650 + MGP_BALBcJ_P0022438 Glrx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022439.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142612736 142622178 + MGP_BALBcJ_P0022439 Glrx2 protein_coding protein_coding MGP_BALBcJ_T0022440.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142615755 142618005 + Glrx2 protein_coding retained_intron MGP_BALBcJ_T0022441.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142617323 142619027 + Glrx2 protein_coding retained_intron MGP_BALBcJ_T0022442.1 MGP_BALBcJ_G0016505.1 mouse_genomes_project 1 142618311 142619116 + Glrx2 protein_coding processed_transcript MGP_BALBcJ_T0005692.1 MGP_BALBcJ_G0004784.1 mouse_genomes_project 1 44437348 44438299 - Gm28151 lincRNA lincRNA MGP_BALBcJ_T0022254.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134252419 134405929 - MGP_BALBcJ_P0022254 Nav1 protein_coding protein_coding MGP_BALBcJ_T0022255.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134252419 134405579 - MGP_BALBcJ_P0022255 Nav1 protein_coding protein_coding MGP_BALBcJ_T0022256.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134256670 134427355 - MGP_BALBcJ_P0022256 Nav1 protein_coding protein_coding MGP_BALBcJ_T0022257.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134270203 134271736 - Nav1 protein_coding retained_intron MGP_BALBcJ_T0022258.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134273144 134285502 - MGP_BALBcJ_P0022258 Nav1 protein_coding protein_coding MGP_BALBcJ_T0022259.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134275610 134279018 - Nav1 protein_coding retained_intron MGP_BALBcJ_T0022260.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134275610 134328816 - Nav1 protein_coding retained_intron MGP_BALBcJ_T0022261.1 MGP_BALBcJ_G0016468.1 mouse_genomes_project 1 134276508 134328883 - Nav1 protein_coding processed_transcript MGP_BALBcJ_T0020499.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72700273 72743586 + MGP_BALBcJ_P0020499 Ttll4 protein_coding protein_coding MGP_BALBcJ_T0020500.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72700278 72723939 + MGP_BALBcJ_P0020500 Ttll4 protein_coding protein_coding MGP_BALBcJ_T0020501.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72700345 72711774 + Ttll4 protein_coding retained_intron MGP_BALBcJ_T0020502.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72700345 72720347 + MGP_BALBcJ_P0020502 Ttll4 protein_coding protein_coding MGP_BALBcJ_T0020503.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72717453 72737833 + MGP_BALBcJ_P0020503 Ttll4 protein_coding protein_coding MGP_BALBcJ_T0020504.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72723907 72727210 + Ttll4 protein_coding processed_transcript MGP_BALBcJ_T0020505.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72724537 72727232 + Ttll4 protein_coding processed_transcript MGP_BALBcJ_T0020506.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72728004 72729260 + Ttll4 protein_coding retained_intron MGP_BALBcJ_T0020507.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72728654 72741688 + Ttll4 protein_coding processed_transcript MGP_BALBcJ_T0020508.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72735068 72739734 + Ttll4 protein_coding retained_intron MGP_BALBcJ_T0020509.1 MGP_BALBcJ_G0016097.1 mouse_genomes_project 1 72735589 72737697 + Ttll4 protein_coding processed_transcript MGP_BALBcJ_T0020567.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73164659 73175725 - MGP_BALBcJ_P0020567 Atg9a protein_coding protein_coding MGP_BALBcJ_T0020568.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73164664 73175995 - MGP_BALBcJ_P0020568 Atg9a protein_coding protein_coding MGP_BALBcJ_T0020569.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73164664 73175722 - MGP_BALBcJ_P0020569 Atg9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020570.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73164664 73174181 - MGP_BALBcJ_P0020570 Atg9a protein_coding protein_coding MGP_BALBcJ_T0020571.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73164665 73175722 - MGP_BALBcJ_P0020571 Atg9a protein_coding protein_coding MGP_BALBcJ_T0020572.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73166788 73169846 - MGP_BALBcJ_P0020572 Atg9a protein_coding protein_coding MGP_BALBcJ_T0020573.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73171355 73175524 - Atg9a protein_coding retained_intron MGP_BALBcJ_T0020574.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73173567 73175761 - Atg9a protein_coding retained_intron MGP_BALBcJ_T0020575.1 MGP_BALBcJ_G0016113.1 mouse_genomes_project 1 73173915 73175513 - MGP_BALBcJ_P0020575 Atg9a protein_coding protein_coding MGP_BALBcJ_T0011832.1 MGP_BALBcJ_G0009929.1 mouse_genomes_project 1 1650386 1651322 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002927.1 MGP_BALBcJ_G0002752.1 mouse_genomes_project 1 168968256 168971850 + 3110045C21Rik antisense antisense MGP_BALBcJ_T0002928.1 MGP_BALBcJ_G0002752.1 mouse_genomes_project 1 168968299 168971824 + 3110045C21Rik antisense antisense MGP_BALBcJ_T0022538.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425004 150440140 + Trmt1l protein_coding retained_intron MGP_BALBcJ_T0022539.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425004 150456027 + MGP_BALBcJ_P0022539 Trmt1l protein_coding protein_coding MGP_BALBcJ_T0022540.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425099 150433144 + Trmt1l protein_coding retained_intron MGP_BALBcJ_T0022541.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425104 150447644 + Trmt1l protein_coding retained_intron MGP_BALBcJ_T0022542.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425110 150427099 + Trmt1l protein_coding retained_intron MGP_BALBcJ_T0022543.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425129 150433144 + Trmt1l protein_coding retained_intron MGP_BALBcJ_T0022544.1 MGP_BALBcJ_G0016523.1 mouse_genomes_project 1 150425168 150456027 + MGP_BALBcJ_P0022544 Trmt1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023777.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179459941 179662260 + MGP_BALBcJ_P0023777 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023778.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179460054 179664707 + MGP_BALBcJ_P0023778 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023779.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179460229 179610820 + MGP_BALBcJ_P0023779 Cdc42bpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023780.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179460579 179661270 + MGP_BALBcJ_P0023780 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023781.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179460579 179661270 + MGP_BALBcJ_P0023781 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023782.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179475104 179540138 + Cdc42bpa protein_coding processed_transcript MGP_BALBcJ_T0023783.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179491778 179536867 + Cdc42bpa protein_coding retained_intron MGP_BALBcJ_T0023784.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179583411 179593775 + Cdc42bpa protein_coding retained_intron MGP_BALBcJ_T0023785.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179600072 179661692 + MGP_BALBcJ_P0023785 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023786.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179605945 179617886 + Cdc42bpa protein_coding retained_intron MGP_BALBcJ_T0023787.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179607920 179611095 + Cdc42bpa protein_coding retained_intron MGP_BALBcJ_T0023788.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179608120 179664706 + MGP_BALBcJ_P0023788 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023789.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179608193 179648337 + MGP_BALBcJ_P0023789 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023790.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179610267 179635672 + MGP_BALBcJ_P0023790 Cdc42bpa protein_coding protein_coding MGP_BALBcJ_T0023791.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179610285 179615236 + Cdc42bpa protein_coding retained_intron MGP_BALBcJ_T0023792.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179622533 179637500 + Cdc42bpa protein_coding processed_transcript MGP_BALBcJ_T0023793.1 MGP_BALBcJ_G0016802.1 mouse_genomes_project 1 179660110 179661398 + Cdc42bpa protein_coding retained_intron MGP_BALBcJ_T0100345.1 MGP_BALBcJ_G0038381.1 mouse_genomes_project 1 57626982 57627066 + Gm26293 snoRNA snoRNA MGP_BALBcJ_T0002762.1 MGP_BALBcJ_G0002626.1 mouse_genomes_project 1 35157260 35164901 + Gm26805 antisense antisense MGP_BALBcJ_T0002734.1 MGP_BALBcJ_G0002605.1 mouse_genomes_project 1 10410279 10420696 + Gm29570 antisense antisense MGP_BALBcJ_T0022313.1 MGP_BALBcJ_G0016479.1 mouse_genomes_project 1 134967860 135015154 + MGP_BALBcJ_P0022313 Kif21b protein_coding protein_coding MGP_BALBcJ_T0022314.1 MGP_BALBcJ_G0016479.1 mouse_genomes_project 1 134967925 134987189 + Kif21b protein_coding retained_intron MGP_BALBcJ_T0022315.1 MGP_BALBcJ_G0016479.1 mouse_genomes_project 1 134968193 135015164 + MGP_BALBcJ_P0022315 Kif21b protein_coding unknown_likely_coding MGP_BALBcJ_T0022316.1 MGP_BALBcJ_G0016479.1 mouse_genomes_project 1 134997507 135002194 + MGP_BALBcJ_P0022316 Kif21b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022317.1 MGP_BALBcJ_G0016479.1 mouse_genomes_project 1 135000098 135001980 + Kif21b protein_coding retained_intron MGP_BALBcJ_T0022318.1 MGP_BALBcJ_G0016479.1 mouse_genomes_project 1 135006469 135009455 + Kif21b protein_coding processed_transcript MGP_BALBcJ_T0023612.1 MGP_BALBcJ_G0016754.1 mouse_genomes_project 1 173158367 173180798 - MGP_BALBcJ_P0023612 protein_coding protein_coding MGP_BALBcJ_T0000389.1 MGP_BALBcJ_G0000330.1 mouse_genomes_project 1 17138610 17142119 - TEC TEC MGP_BALBcJ_T0019256.1 MGP_BALBcJ_G0015862.1 mouse_genomes_project 1 33758589 33795792 + MGP_BALBcJ_P0019256 Cnnm4 protein_coding protein_coding MGP_BALBcJ_T0019257.1 MGP_BALBcJ_G0015862.1 mouse_genomes_project 1 33758985 33760357 + Cnnm4 protein_coding retained_intron MGP_BALBcJ_T0020743.1 MGP_BALBcJ_G0016134.1 mouse_genomes_project 1 76136204 76236546 - MGP_BALBcJ_P0020743 Pax3 protein_coding protein_coding MGP_BALBcJ_T0020744.1 MGP_BALBcJ_G0016134.1 mouse_genomes_project 1 76136207 76236842 - MGP_BALBcJ_P0020744 Pax3 protein_coding protein_coding MGP_BALBcJ_T0020745.1 MGP_BALBcJ_G0016134.1 mouse_genomes_project 1 76223279 76236821 - Pax3 protein_coding processed_transcript MGP_BALBcJ_T0000789.1 MGP_BALBcJ_G0000723.1 mouse_genomes_project 1 191673606 191673739 + TEC TEC MGP_BALBcJ_T0012148.1 MGP_BALBcJ_G0010245.1 mouse_genomes_project 1 104895877 104896148 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012192.1 MGP_BALBcJ_G0010289.1 mouse_genomes_project 1 120294509 120294692 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022871.1 MGP_BALBcJ_G0016583.1 mouse_genomes_project 1 159223209 159227806 + MGP_BALBcJ_P0022871 Mrps14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022872.1 MGP_BALBcJ_G0016583.1 mouse_genomes_project 1 159223209 159230166 + MGP_BALBcJ_P0022872 Mrps14 protein_coding protein_coding MGP_BALBcJ_T0022873.1 MGP_BALBcJ_G0016583.1 mouse_genomes_project 1 159223297 159227798 + MGP_BALBcJ_P0022873 Mrps14 protein_coding protein_coding MGP_BALBcJ_T0020207.1 MGP_BALBcJ_G0016042.1 mouse_genomes_project 1 63072121 63074191 - MGP_BALBcJ_P0020207 Crygb protein_coding protein_coding MGP_BALBcJ_T0022058.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 131967699 132089656 + MGP_BALBcJ_P0022058 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022059.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132034336 132091872 + MGP_BALBcJ_P0022059 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022060.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132034345 132091872 + MGP_BALBcJ_P0022060 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022061.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132044988 132055277 + MGP_BALBcJ_P0022061 Plekha6 protein_coding unknown_likely_coding MGP_BALBcJ_T0022062.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132046990 132089653 + MGP_BALBcJ_P0022062 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022063.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132057415 132087472 + MGP_BALBcJ_P0022063 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022064.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132057970 132060849 + Plekha6 protein_coding processed_transcript MGP_BALBcJ_T0022065.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132062762 132070326 + MGP_BALBcJ_P0022065 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022066.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132062768 132073470 + MGP_BALBcJ_P0022066 Plekha6 protein_coding protein_coding MGP_BALBcJ_T0022067.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132080186 132082663 + Plekha6 protein_coding retained_intron MGP_BALBcJ_T0022068.1 MGP_BALBcJ_G0016424.1 mouse_genomes_project 1 132086387 132090054 + Plekha6 protein_coding retained_intron MGP_BALBcJ_T0005698.1 MGP_BALBcJ_G0004789.1 mouse_genomes_project 1 48512024 48513424 + Gm28322 lincRNA lincRNA MGP_BALBcJ_T0012186.1 MGP_BALBcJ_G0010283.1 mouse_genomes_project 1 118509270 118509500 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000567.1 MGP_BALBcJ_G0000505.1 mouse_genomes_project 1 96318334 96320018 - TEC TEC MGP_BALBcJ_T0021955.1 MGP_BALBcJ_G0016405.1 mouse_genomes_project 1 130669578 130693876 + MGP_BALBcJ_P0021955 Nucks1 protein_coding protein_coding MGP_BALBcJ_T0021956.1 MGP_BALBcJ_G0016405.1 mouse_genomes_project 1 130669600 130697517 + MGP_BALBcJ_P0021956 Nucks1 protein_coding protein_coding MGP_BALBcJ_T0021957.1 MGP_BALBcJ_G0016405.1 mouse_genomes_project 1 130690359 130691268 + Nucks1 protein_coding retained_intron MGP_BALBcJ_T0012236.1 MGP_BALBcJ_G0010333.1 mouse_genomes_project 1 141647930 141649246 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005958.1 MGP_BALBcJ_G0004994.1 mouse_genomes_project 1 165098071 165098232 + Gm37923 lincRNA lincRNA MGP_BALBcJ_T0000554.1 MGP_BALBcJ_G0000492.1 mouse_genomes_project 1 88588287 88589646 - TEC TEC MGP_BALBcJ_T0021125.1 MGP_BALBcJ_G0016214.1 mouse_genomes_project 1 86315353 86467228 + MGP_BALBcJ_P0021125 protein_coding protein_coding MGP_BALBcJ_T0021126.1 MGP_BALBcJ_G0016214.1 mouse_genomes_project 1 86315355 86473447 + MGP_BALBcJ_P0021126 protein_coding protein_coding MGP_BALBcJ_T0021127.1 MGP_BALBcJ_G0016214.1 mouse_genomes_project 1 86315405 86471637 + MGP_BALBcJ_P0021127 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102062.1 MGP_BALBcJ_G0039879.1 mouse_genomes_project 1 86232914 86233763 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0023619.1 MGP_BALBcJ_G0016760.1 mouse_genomes_project 1 173335851 173341468 + MGP_BALBcJ_P0023619 Olfr429 protein_coding protein_coding MGP_BALBcJ_T0023620.1 MGP_BALBcJ_G0016760.1 mouse_genomes_project 1 173340525 173341468 + MGP_BALBcJ_P0023620 Olfr429 protein_coding protein_coding MGP_BALBcJ_T0024030.1 MGP_BALBcJ_G0016852.1 mouse_genomes_project 1 184846806 184873910 + MGP_BALBcJ_P0024030 Bpnt1 protein_coding unknown_likely_coding MGP_BALBcJ_T0024031.1 MGP_BALBcJ_G0016852.1 mouse_genomes_project 1 184846807 184875061 + MGP_BALBcJ_P0024031 Bpnt1 protein_coding protein_coding MGP_BALBcJ_T0024032.1 MGP_BALBcJ_G0016852.1 mouse_genomes_project 1 184846831 184862371 + MGP_BALBcJ_P0024032 Bpnt1 protein_coding protein_coding MGP_BALBcJ_T0024033.1 MGP_BALBcJ_G0016852.1 mouse_genomes_project 1 184846838 184874065 + MGP_BALBcJ_P0024033 Bpnt1 protein_coding protein_coding MGP_BALBcJ_T0024034.1 MGP_BALBcJ_G0016852.1 mouse_genomes_project 1 184846865 184863771 + Bpnt1 protein_coding processed_transcript MGP_BALBcJ_T0102053.1 MGP_BALBcJ_G0039870.1 mouse_genomes_project 1 49730334 49731222 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101825.1 MGP_BALBcJ_G0039755.1 mouse_genomes_project 1 50910172 50917271 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101826.1 MGP_BALBcJ_G0039755.1 mouse_genomes_project 1 50910198 50945444 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0012211.1 MGP_BALBcJ_G0010308.1 mouse_genomes_project 1 129994040 129995215 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021132.1 MGP_BALBcJ_G0016217.1 mouse_genomes_project 1 86398137 86472410 + MGP_BALBcJ_P0021132 Ugt1a5 protein_coding protein_coding MGP_BALBcJ_T0023536.1 MGP_BALBcJ_G0016726.1 mouse_genomes_project 1 171453727 171486930 + MGP_BALBcJ_P0023536 Kcnj10 protein_coding protein_coding MGP_BALBcJ_T0018988.1 MGP_BALBcJ_G0015806.1 mouse_genomes_project 1 17134401 17692513 - MGP_BALBcJ_P0018988 Pkhd1 protein_coding protein_coding MGP_BALBcJ_T0018989.1 MGP_BALBcJ_G0015806.1 mouse_genomes_project 1 17453945 17487857 - Pkhd1 protein_coding processed_transcript MGP_BALBcJ_T0018990.1 MGP_BALBcJ_G0015806.1 mouse_genomes_project 1 17658321 17692513 - Pkhd1 protein_coding retained_intron MGP_BALBcJ_T0018991.1 MGP_BALBcJ_G0015806.1 mouse_genomes_project 1 17679977 17692489 - Pkhd1 protein_coding processed_transcript MGP_BALBcJ_T0019396.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35359050 35436770 - MGP_BALBcJ_P0019396 Rev1 protein_coding protein_coding MGP_BALBcJ_T0019397.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35359060 35394531 - Rev1 protein_coding retained_intron MGP_BALBcJ_T0019398.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35359564 35360515 - Rev1 protein_coding retained_intron MGP_BALBcJ_T0019399.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35362785 35363969 - Rev1 protein_coding retained_intron MGP_BALBcJ_T0019400.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35373865 35390156 - MGP_BALBcJ_P0019400 Rev1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019401.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35377634 35392053 - MGP_BALBcJ_P0019401 Rev1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019402.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35381021 35387734 - Rev1 protein_coding processed_transcript MGP_BALBcJ_T0019403.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35385450 35390222 - Rev1 protein_coding retained_intron MGP_BALBcJ_T0019404.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35398560 35435409 - MGP_BALBcJ_P0019404 Rev1 protein_coding protein_coding MGP_BALBcJ_T0019405.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35406025 35435425 - MGP_BALBcJ_P0019405 Rev1 protein_coding protein_coding MGP_BALBcJ_T0019406.1 MGP_BALBcJ_G0015887.1 mouse_genomes_project 1 35414799 35436909 - MGP_BALBcJ_P0019406 Rev1 protein_coding protein_coding MGP_BALBcJ_T0021010.1 MGP_BALBcJ_G0016194.1 mouse_genomes_project 1 85277315 85279491 + Akp3 protein_coding retained_intron MGP_BALBcJ_T0021011.1 MGP_BALBcJ_G0016194.1 mouse_genomes_project 1 85277350 85280255 + MGP_BALBcJ_P0021011 Akp3 protein_coding protein_coding MGP_BALBcJ_T0012295.1 MGP_BALBcJ_G0010392.1 mouse_genomes_project 1 165055769 165056122 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022128.1 MGP_BALBcJ_G0016440.1 mouse_genomes_project 1 132873380 132877330 - MGP_BALBcJ_P0022128 Btg2 protein_coding protein_coding MGP_BALBcJ_T0020035.1 MGP_BALBcJ_G0016010.1 mouse_genomes_project 1 57924767 57933218 - Ica1l protein_coding processed_transcript MGP_BALBcJ_T0020036.1 MGP_BALBcJ_G0016010.1 mouse_genomes_project 1 57931362 57984257 - MGP_BALBcJ_P0020036 Ica1l protein_coding protein_coding MGP_BALBcJ_T0020037.1 MGP_BALBcJ_G0016010.1 mouse_genomes_project 1 57931369 57984292 - MGP_BALBcJ_P0020037 Ica1l protein_coding protein_coding MGP_BALBcJ_T0020038.1 MGP_BALBcJ_G0016010.1 mouse_genomes_project 1 57933416 57970123 - MGP_BALBcJ_P0020038 Ica1l protein_coding protein_coding MGP_BALBcJ_T0020039.1 MGP_BALBcJ_G0016010.1 mouse_genomes_project 1 57957947 57964486 - Ica1l protein_coding retained_intron MGP_BALBcJ_T0024118.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190277698 190490420 - MGP_BALBcJ_P0024118 Rps6kc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024119.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190349735 190409656 - MGP_BALBcJ_P0024119 Rps6kc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024120.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190349735 190490443 - MGP_BALBcJ_P0024120 Rps6kc1 protein_coding protein_coding MGP_BALBcJ_T0024121.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190349735 190490411 - MGP_BALBcJ_P0024121 Rps6kc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024122.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190371826 190420582 - Rps6kc1 protein_coding retained_intron MGP_BALBcJ_T0024123.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190374205 190490407 - Rps6kc1 protein_coding retained_intron MGP_BALBcJ_T0024124.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190384507 190386083 - Rps6kc1 protein_coding retained_intron MGP_BALBcJ_T0024125.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190447481 190477738 - Rps6kc1 protein_coding processed_transcript MGP_BALBcJ_T0024126.1 MGP_BALBcJ_G0016869.1 mouse_genomes_project 1 190460929 190490442 - MGP_BALBcJ_P0024126 Rps6kc1 protein_coding protein_coding MGP_BALBcJ_T0098809.1 MGP_BALBcJ_G0036862.1 mouse_genomes_project 1 182951726 182953601 + Gm37214 sense_intronic sense_intronic MGP_BALBcJ_T0002749.1 MGP_BALBcJ_G0002615.1 mouse_genomes_project 1 18193952 18195577 + Gm28287 antisense antisense MGP_BALBcJ_T0005618.1 MGP_BALBcJ_G0004732.1 mouse_genomes_project 1 4409365 4412986 - lincRNA retained_intron MGP_BALBcJ_T0000787.1 MGP_BALBcJ_G0000721.1 mouse_genomes_project 1 191126278 191127285 - TEC TEC MGP_BALBcJ_T0021373.1 MGP_BALBcJ_G0016275.1 mouse_genomes_project 1 91698703 91705354 - MGP_BALBcJ_P0021373 Mterf4 protein_coding protein_coding MGP_BALBcJ_T0021374.1 MGP_BALBcJ_G0016275.1 mouse_genomes_project 1 91700705 91705406 - MGP_BALBcJ_P0021374 Mterf4 protein_coding protein_coding MGP_BALBcJ_T0021375.1 MGP_BALBcJ_G0016275.1 mouse_genomes_project 1 91700928 91702394 - Mterf4 protein_coding processed_transcript MGP_BALBcJ_T0021376.1 MGP_BALBcJ_G0016275.1 mouse_genomes_project 1 91701417 91705355 - MGP_BALBcJ_P0021376 Mterf4 protein_coding protein_coding MGP_BALBcJ_T0021377.1 MGP_BALBcJ_G0016275.1 mouse_genomes_project 1 91702989 91705370 - Mterf4 protein_coding retained_intron MGP_BALBcJ_T0011903.1 MGP_BALBcJ_G0010000.1 mouse_genomes_project 1 18651872 18652867 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020308.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67823714 68260618 + Spag16 protein_coding processed_transcript MGP_BALBcJ_T0020309.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67823715 68260519 + Spag16 protein_coding processed_transcript MGP_BALBcJ_T0020310.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67823732 68729475 + MGP_BALBcJ_P0020310 Spag16 protein_coding protein_coding MGP_BALBcJ_T0020311.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67823736 67922895 + MGP_BALBcJ_P0020311 Spag16 protein_coding protein_coding MGP_BALBcJ_T0020312.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67828482 67871212 + Spag16 protein_coding processed_transcript MGP_BALBcJ_T0020313.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67945809 68729475 + Spag16 protein_coding processed_transcript MGP_BALBcJ_T0020314.1 MGP_BALBcJ_G0016060.1 mouse_genomes_project 1 67945836 68275351 + Spag16 protein_coding processed_transcript MGP_BALBcJ_T0023622.1 MGP_BALBcJ_G0016762.1 mouse_genomes_project 1 173402644 173403591 + MGP_BALBcJ_P0023622 Olfr424 protein_coding protein_coding MGP_BALBcJ_T0023037.1 MGP_BALBcJ_G0016612.1 mouse_genomes_project 1 162260540 162327754 - MGP_BALBcJ_P0023037 Prrx1 protein_coding protein_coding MGP_BALBcJ_T0023038.1 MGP_BALBcJ_G0016612.1 mouse_genomes_project 1 162260540 162327716 - MGP_BALBcJ_P0023038 Prrx1 protein_coding protein_coding MGP_BALBcJ_T0023039.1 MGP_BALBcJ_G0016612.1 mouse_genomes_project 1 162263002 162303875 - Prrx1 protein_coding processed_transcript MGP_BALBcJ_T0023040.1 MGP_BALBcJ_G0016612.1 mouse_genomes_project 1 162268273 162327712 - MGP_BALBcJ_P0023040 Prrx1 protein_coding protein_coding MGP_BALBcJ_T0023041.1 MGP_BALBcJ_G0016612.1 mouse_genomes_project 1 162297459 162327715 - Prrx1 protein_coding retained_intron MGP_BALBcJ_T0011881.1 MGP_BALBcJ_G0009978.1 mouse_genomes_project 1 13097595 13098148 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005907.1 MGP_BALBcJ_G0004955.1 mouse_genomes_project 1 148064776 148085759 + Gm29020 lincRNA lincRNA MGP_BALBcJ_T0099159.1 MGP_BALBcJ_G0037195.1 mouse_genomes_project 1 191352700 191352804 - Gm22446 snRNA snRNA MGP_BALBcJ_T0000713.1 MGP_BALBcJ_G0000649.1 mouse_genomes_project 1 160028011 160028877 - TEC TEC MGP_BALBcJ_T0005984.1 MGP_BALBcJ_G0005017.1 mouse_genomes_project 1 181202375 181224258 + lincRNA lincRNA MGP_BALBcJ_T0005985.1 MGP_BALBcJ_G0005017.1 mouse_genomes_project 1 181202401 181214866 + lincRNA lincRNA MGP_BALBcJ_T0000529.1 MGP_BALBcJ_G0000467.1 mouse_genomes_project 1 80389363 80392196 + TEC TEC MGP_BALBcJ_T0024309.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194669532 194703146 - MGP_BALBcJ_P0024309 Cr1l protein_coding protein_coding MGP_BALBcJ_T0024310.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194670809 194703125 - MGP_BALBcJ_P0024310 Cr1l protein_coding protein_coding MGP_BALBcJ_T0024311.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194675399 194679182 - Cr1l protein_coding retained_intron MGP_BALBcJ_T0024312.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194675495 194703363 - MGP_BALBcJ_P0024312 Cr1l protein_coding protein_coding MGP_BALBcJ_T0024313.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194675501 194689443 - MGP_BALBcJ_P0024313 Cr1l protein_coding protein_coding MGP_BALBcJ_T0024314.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194686456 194701264 - Cr1l protein_coding retained_intron MGP_BALBcJ_T0024315.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194686583 194703388 - MGP_BALBcJ_P0024315 Cr1l protein_coding protein_coding MGP_BALBcJ_T0024316.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194697716 194703336 - Cr1l protein_coding retained_intron MGP_BALBcJ_T0024317.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194700995 194703132 - MGP_BALBcJ_P0024317 Cr1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024318.1 MGP_BALBcJ_G0016905.1 mouse_genomes_project 1 194701447 194703157 - Cr1l protein_coding retained_intron MGP_BALBcJ_T0011940.1 MGP_BALBcJ_G0010037.1 mouse_genomes_project 1 30709596 30710014 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012185.1 MGP_BALBcJ_G0010282.1 mouse_genomes_project 1 118451112 118451475 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000355.1 MGP_BALBcJ_G0000296.1 mouse_genomes_project 1 2868770 2870560 - TEC TEC MGP_BALBcJ_T0023385.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350091 170355850 - MGP_BALBcJ_P0023385 Usp21 protein_coding unknown_likely_coding MGP_BALBcJ_T0023386.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350094 170359105 - MGP_BALBcJ_P0023386 Usp21 protein_coding protein_coding MGP_BALBcJ_T0023387.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350098 170359038 - MGP_BALBcJ_P0023387 Usp21 protein_coding protein_coding MGP_BALBcJ_T0023388.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350107 170351603 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023389.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350107 170359069 - MGP_BALBcJ_P0023389 Usp21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023390.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350107 170359075 - MGP_BALBcJ_P0023390 Usp21 protein_coding protein_coding MGP_BALBcJ_T0023391.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170350451 170351863 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023392.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170351495 170353278 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023393.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170351727 170352681 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023394.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170352101 170356007 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023395.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170352214 170358064 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023396.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170353153 170359073 - Usp21 protein_coding retained_intron MGP_BALBcJ_T0023397.1 MGP_BALBcJ_G0016694.1 mouse_genomes_project 1 170355324 170357920 - MGP_BALBcJ_P0023397 Usp21 protein_coding protein_coding MGP_BALBcJ_T0005948.1 MGP_BALBcJ_G0004987.1 mouse_genomes_project 1 163693572 163721102 + Gm37184 lincRNA lincRNA MGP_BALBcJ_T0000771.1 MGP_BALBcJ_G0000705.1 mouse_genomes_project 1 182474949 182477781 + TEC TEC MGP_BALBcJ_T0021839.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 127996093 128153498 + Thsd7b protein_coding retained_intron MGP_BALBcJ_T0021840.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 127996135 128941339 + MGP_BALBcJ_P0021840 Thsd7b protein_coding protein_coding MGP_BALBcJ_T0021841.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 127996254 128776075 + MGP_BALBcJ_P0021841 Thsd7b protein_coding protein_coding MGP_BALBcJ_T0021842.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 127996276 128344682 + Thsd7b protein_coding processed_transcript MGP_BALBcJ_T0021843.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 128253642 128344716 + MGP_BALBcJ_P0021843 Thsd7b protein_coding protein_coding MGP_BALBcJ_T0021844.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 128329761 128332530 + Thsd7b protein_coding retained_intron MGP_BALBcJ_T0021845.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 128630208 128908956 + Thsd7b protein_coding processed_transcript MGP_BALBcJ_T0021846.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 128888345 128941337 + Thsd7b protein_coding processed_transcript MGP_BALBcJ_T0021847.1 MGP_BALBcJ_G0016375.1 mouse_genomes_project 1 128888360 128889913 + Thsd7b protein_coding processed_transcript MGP_BALBcJ_T0011220.1 MGP_BALBcJ_G0009345.1 mouse_genomes_project 1 35276763 35277000 + Gm23409 misc_RNA misc_RNA MGP_BALBcJ_T0024241.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192636689 192660175 - MGP_BALBcJ_P0024241 Diexf protein_coding protein_coding MGP_BALBcJ_T0024242.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192638126 192663057 - MGP_BALBcJ_P0024242 Diexf protein_coding protein_coding MGP_BALBcJ_T0024243.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192649902 192676229 - MGP_BALBcJ_P0024243 Diexf protein_coding protein_coding MGP_BALBcJ_T0024244.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192649918 192676201 - MGP_BALBcJ_P0024244 Diexf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024245.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192653252 192660878 - Diexf protein_coding retained_intron MGP_BALBcJ_T0024246.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192665977 192667971 - Diexf protein_coding retained_intron MGP_BALBcJ_T0024247.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192666142 192674295 - Diexf protein_coding processed_transcript MGP_BALBcJ_T0024248.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192667541 192676164 - MGP_BALBcJ_P0024248 Diexf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024249.1 MGP_BALBcJ_G0016894.1 mouse_genomes_project 1 192667559 192669310 - Diexf protein_coding processed_transcript MGP_BALBcJ_T0011889.1 MGP_BALBcJ_G0009986.1 mouse_genomes_project 1 15037281 15041077 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005982.1 MGP_BALBcJ_G0005016.1 mouse_genomes_project 1 180767098 180769611 + A430110L20Rik lincRNA lincRNA MGP_BALBcJ_T0005983.1 MGP_BALBcJ_G0005016.1 mouse_genomes_project 1 180767188 180769603 + A430110L20Rik lincRNA lincRNA MGP_BALBcJ_T0019761.1 MGP_BALBcJ_G0015961.1 mouse_genomes_project 1 51656478 52046289 - MGP_BALBcJ_P0019761 Hecw2 protein_coding protein_coding MGP_BALBcJ_T0019762.1 MGP_BALBcJ_G0015961.1 mouse_genomes_project 1 51656484 52047357 - MGP_BALBcJ_P0019762 Hecw2 protein_coding protein_coding MGP_BALBcJ_T0019763.1 MGP_BALBcJ_G0015961.1 mouse_genomes_project 1 51682395 51690878 - Hecw2 protein_coding processed_transcript MGP_BALBcJ_T0019764.1 MGP_BALBcJ_G0015961.1 mouse_genomes_project 1 51688722 51716175 - Hecw2 protein_coding processed_transcript MGP_BALBcJ_T0019765.1 MGP_BALBcJ_G0015961.1 mouse_genomes_project 1 51785447 52047357 - MGP_BALBcJ_P0019765 Hecw2 protein_coding protein_coding MGP_BALBcJ_T0019766.1 MGP_BALBcJ_G0015961.1 mouse_genomes_project 1 51796120 52047491 - Hecw2 protein_coding retained_intron MGP_BALBcJ_T0019187.1 MGP_BALBcJ_G0015851.1 mouse_genomes_project 1 31852132 31864196 + MGP_BALBcJ_P0019187 Amer3 protein_coding protein_coding MGP_BALBcJ_T0009454.1 MGP_BALBcJ_G0007579.1 mouse_genomes_project 1 33793594 33793735 + miRNA miRNA MGP_BALBcJ_T0012175.1 MGP_BALBcJ_G0010272.1 mouse_genomes_project 1 115914680 115915956 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000367.1 MGP_BALBcJ_G0000308.1 mouse_genomes_project 1 7855794 7857717 - TEC TEC MGP_BALBcJ_T0020697.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73465992 73473909 - protein_coding retained_intron MGP_BALBcJ_T0020702.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73472500 73493583 - MGP_BALBcJ_P0020702 protein_coding protein_coding MGP_BALBcJ_T0020703.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73473526 73474478 - protein_coding retained_intron MGP_BALBcJ_T0020704.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73473898 73474754 - protein_coding retained_intron MGP_BALBcJ_T0020705.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73477209 73492863 - MGP_BALBcJ_P0020705 protein_coding protein_coding MGP_BALBcJ_T0020706.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73477524 73479743 - MGP_BALBcJ_P0020706 protein_coding protein_coding MGP_BALBcJ_T0020707.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73477644 73478487 - protein_coding retained_intron MGP_BALBcJ_T0020708.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73478033 73479307 - protein_coding processed_transcript MGP_BALBcJ_T0020709.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73479070 73479717 - protein_coding retained_intron MGP_BALBcJ_T0020710.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73483558 73493583 - MGP_BALBcJ_P0020710 protein_coding protein_coding MGP_BALBcJ_T0020711.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73483559 73490902 - protein_coding retained_intron MGP_BALBcJ_T0020712.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73488894 73493674 - protein_coding retained_intron MGP_BALBcJ_T0020713.1 MGP_BALBcJ_G0016128.1 mouse_genomes_project 1 73488894 73493583 - protein_coding retained_intron MGP_BALBcJ_T0000437.1 MGP_BALBcJ_G0000375.1 mouse_genomes_project 1 33312730 33314102 - TEC TEC MGP_BALBcJ_T0012202.1 MGP_BALBcJ_G0010299.1 mouse_genomes_project 1 123331654 123332045 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021776.1 MGP_BALBcJ_G0016363.1 mouse_genomes_project 1 126209786 126393329 - MGP_BALBcJ_P0021776 Tmem163 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021777.1 MGP_BALBcJ_G0016363.1 mouse_genomes_project 1 126209798 126393254 - MGP_BALBcJ_P0021777 Tmem163 protein_coding protein_coding MGP_BALBcJ_T0021778.1 MGP_BALBcJ_G0016363.1 mouse_genomes_project 1 126214134 126394776 - MGP_BALBcJ_P0021778 Tmem163 protein_coding protein_coding MGP_BALBcJ_T0021779.1 MGP_BALBcJ_G0016363.1 mouse_genomes_project 1 126214597 126223944 - Tmem163 protein_coding retained_intron MGP_BALBcJ_T0021780.1 MGP_BALBcJ_G0016363.1 mouse_genomes_project 1 126214781 126259116 - Tmem163 protein_coding processed_transcript MGP_BALBcJ_T0018983.1 MGP_BALBcJ_G0015805.1 mouse_genomes_project 1 16284894 16316146 + MGP_BALBcJ_P0018983 Tfap2b protein_coding protein_coding MGP_BALBcJ_T0018984.1 MGP_BALBcJ_G0015805.1 mouse_genomes_project 1 16285067 16315653 + MGP_BALBcJ_P0018984 Tfap2b protein_coding protein_coding MGP_BALBcJ_T0018985.1 MGP_BALBcJ_G0015805.1 mouse_genomes_project 1 16288148 16312198 + MGP_BALBcJ_P0018985 Tfap2b protein_coding protein_coding MGP_BALBcJ_T0018986.1 MGP_BALBcJ_G0015805.1 mouse_genomes_project 1 16288397 16291011 + Tfap2b protein_coding retained_intron MGP_BALBcJ_T0018987.1 MGP_BALBcJ_G0015805.1 mouse_genomes_project 1 16290447 16295817 + Tfap2b protein_coding retained_intron MGP_BALBcJ_T0012069.1 MGP_BALBcJ_G0010166.1 mouse_genomes_project 1 67133358 67133744 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000431.1 MGP_BALBcJ_G0000369.1 mouse_genomes_project 1 31131467 31133095 - TEC TEC MGP_BALBcJ_T0002926.1 MGP_BALBcJ_G0002751.1 mouse_genomes_project 1 167001584 167122039 + Gm20711 antisense antisense MGP_BALBcJ_T0099037.1 MGP_BALBcJ_G0037078.1 mouse_genomes_project 1 40066822 40118275 + Gm20646 sense_overlapping sense_overlapping MGP_BALBcJ_T0099038.1 MGP_BALBcJ_G0037078.1 mouse_genomes_project 1 40066822 40114452 + Gm20646 sense_overlapping sense_overlapping MGP_BALBcJ_T0000765.1 MGP_BALBcJ_G0000700.1 mouse_genomes_project 1 181542424 181546293 - TEC TEC MGP_BALBcJ_T0005823.1 MGP_BALBcJ_G0004888.1 mouse_genomes_project 1 94981088 94994638 - Gm29601 lincRNA lincRNA MGP_BALBcJ_T0021861.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129455150 129480541 - MGP_BALBcJ_P0021861 protein_coding protein_coding MGP_BALBcJ_T0021862.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129455157 129458214 - protein_coding retained_intron MGP_BALBcJ_T0021863.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129456246 129495556 - MGP_BALBcJ_P0021863 protein_coding protein_coding MGP_BALBcJ_T0021864.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129456983 129480542 - MGP_BALBcJ_P0021864 protein_coding protein_coding MGP_BALBcJ_T0021865.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129456983 129480542 - MGP_BALBcJ_P0021865 protein_coding protein_coding MGP_BALBcJ_T0021866.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129463661 129480541 - MGP_BALBcJ_P0021866 protein_coding protein_coding MGP_BALBcJ_T0021867.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129463661 129480541 - MGP_BALBcJ_P0021867 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021868.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129463661 129480541 - MGP_BALBcJ_P0021868 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021869.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129463849 129481792 - MGP_BALBcJ_P0021869 protein_coding protein_coding MGP_BALBcJ_T0021870.1 MGP_BALBcJ_G0016381.1 mouse_genomes_project 1 129473545 129483219 - MGP_BALBcJ_P0021870 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005978.1 MGP_BALBcJ_G0005012.1 mouse_genomes_project 1 180008184 180018865 - Gm37267 lincRNA lincRNA MGP_BALBcJ_T0019500.1 MGP_BALBcJ_G0015909.1 mouse_genomes_project 1 38027231 38113166 + MGP_BALBcJ_P0019500 Slc9a2 protein_coding protein_coding MGP_BALBcJ_T0019501.1 MGP_BALBcJ_G0015909.1 mouse_genomes_project 1 38030452 38072210 + MGP_BALBcJ_P0019501 Slc9a2 protein_coding protein_coding MGP_BALBcJ_T0019502.1 MGP_BALBcJ_G0015909.1 mouse_genomes_project 1 38099960 38101276 + Slc9a2 protein_coding retained_intron MGP_BALBcJ_T0098803.1 MGP_BALBcJ_G0036856.1 mouse_genomes_project 1 151729647 151750311 - Gm28792 sense_intronic sense_intronic MGP_BALBcJ_T0000347.1 MGP_BALBcJ_G0000288.1 mouse_genomes_project 1 624942 627666 - TEC TEC MGP_BALBcJ_T0012105.1 MGP_BALBcJ_G0010202.1 mouse_genomes_project 1 84905547 84905969 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011227.1 MGP_BALBcJ_G0009352.1 mouse_genomes_project 1 71426621 71426775 + Gm27315 misc_RNA misc_RNA MGP_BALBcJ_T0002952.1 MGP_BALBcJ_G0002772.1 mouse_genomes_project 1 182040478 182048975 + Gm37885 antisense antisense MGP_BALBcJ_T0002953.1 MGP_BALBcJ_G0002772.1 mouse_genomes_project 1 182046530 182048103 + Gm37885 antisense antisense MGP_BALBcJ_T0099071.1 MGP_BALBcJ_G0037107.1 mouse_genomes_project 1 9390730 9390837 + Gm22633 snRNA snRNA MGP_BALBcJ_T0022056.1 MGP_BALBcJ_G0016423.1 mouse_genomes_project 1 131916531 131925534 + MGP_BALBcJ_P0022056 Ppp1r15b protein_coding protein_coding MGP_BALBcJ_T0022057.1 MGP_BALBcJ_G0016423.1 mouse_genomes_project 1 131916732 131925534 + Ppp1r15b protein_coding processed_transcript MGP_BALBcJ_T0018769.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6846651 6952925 + MGP_BALBcJ_P0018769 Sgk3 protein_coding protein_coding MGP_BALBcJ_T0018770.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6846690 6952927 + MGP_BALBcJ_P0018770 Sgk3 protein_coding protein_coding MGP_BALBcJ_T0018771.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6846690 6952852 + MGP_BALBcJ_P0018771 Sgk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018772.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6846705 6881291 + Sgk3 protein_coding retained_intron MGP_BALBcJ_T0018773.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6846732 6951700 + MGP_BALBcJ_P0018773 Sgk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018774.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6846755 6952090 + MGP_BALBcJ_P0018774 Sgk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018775.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6899026 6952925 + MGP_BALBcJ_P0018775 Sgk3 protein_coding protein_coding MGP_BALBcJ_T0018776.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6899075 6917705 + Sgk3 protein_coding processed_transcript MGP_BALBcJ_T0018777.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6899075 6924604 + Sgk3 protein_coding retained_intron MGP_BALBcJ_T0018778.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6899151 6951935 + MGP_BALBcJ_P0018778 Sgk3 protein_coding protein_coding MGP_BALBcJ_T0018779.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6936006 6941756 + Sgk3 protein_coding retained_intron MGP_BALBcJ_T0018780.1 MGP_BALBcJ_G0015766.1 mouse_genomes_project 1 6947520 6951269 + Sgk3 protein_coding retained_intron MGP_BALBcJ_T0023941.1 MGP_BALBcJ_G0016832.1 mouse_genomes_project 1 182023581 182073815 - MGP_BALBcJ_P0023941 Capn2 protein_coding protein_coding MGP_BALBcJ_T0023942.1 MGP_BALBcJ_G0016832.1 mouse_genomes_project 1 182026535 182036129 - Capn2 protein_coding retained_intron MGP_BALBcJ_T0023943.1 MGP_BALBcJ_G0016832.1 mouse_genomes_project 1 182028860 182037816 - Capn2 protein_coding retained_intron MGP_BALBcJ_T0023944.1 MGP_BALBcJ_G0016832.1 mouse_genomes_project 1 182040199 182049063 - Capn2 protein_coding retained_intron MGP_BALBcJ_T0023945.1 MGP_BALBcJ_G0016832.1 mouse_genomes_project 1 182040204 182073899 - Capn2 protein_coding retained_intron MGP_BALBcJ_T0002822.1 MGP_BALBcJ_G0002669.1 mouse_genomes_project 1 76358901 76374085 - Gm28410 antisense antisense MGP_BALBcJ_T0011925.1 MGP_BALBcJ_G0010022.1 mouse_genomes_project 1 28054395 28054723 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021133.1 MGP_BALBcJ_G0016218.1 mouse_genomes_project 1 86438289 86472410 + MGP_BALBcJ_P0021133 Ugt1a2 protein_coding protein_coding MGP_BALBcJ_T0005648.1 MGP_BALBcJ_G0004757.1 mouse_genomes_project 1 31579212 31580087 - Gm37958 lincRNA lincRNA MGP_BALBcJ_T0024025.1 MGP_BALBcJ_G0016851.1 mouse_genomes_project 1 184791291 184844044 - MGP_BALBcJ_P0024025 Iars2 protein_coding protein_coding MGP_BALBcJ_T0024026.1 MGP_BALBcJ_G0016851.1 mouse_genomes_project 1 184792134 184794930 - Iars2 protein_coding processed_transcript MGP_BALBcJ_T0024027.1 MGP_BALBcJ_G0016851.1 mouse_genomes_project 1 184801691 184844044 - MGP_BALBcJ_P0024027 Iars2 protein_coding protein_coding MGP_BALBcJ_T0024028.1 MGP_BALBcJ_G0016851.1 mouse_genomes_project 1 184827040 184844044 - MGP_BALBcJ_P0024028 Iars2 protein_coding protein_coding MGP_BALBcJ_T0024029.1 MGP_BALBcJ_G0016851.1 mouse_genomes_project 1 184835831 184844044 - Iars2 protein_coding retained_intron MGP_BALBcJ_T0005939.1 MGP_BALBcJ_G0004979.1 mouse_genomes_project 1 160945770 160956293 + Gm31925 lincRNA lincRNA MGP_BALBcJ_T0005940.1 MGP_BALBcJ_G0004979.1 mouse_genomes_project 1 160947459 160958527 + Gm31925 lincRNA lincRNA MGP_BALBcJ_T0012304.1 MGP_BALBcJ_G0010401.1 mouse_genomes_project 1 169931758 169932094 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024072.1 MGP_BALBcJ_G0016861.1 mouse_genomes_project 1 187151608 187599816 + MGP_BALBcJ_P0024072 Esrrg protein_coding protein_coding MGP_BALBcJ_T0024073.1 MGP_BALBcJ_G0016861.1 mouse_genomes_project 1 187151846 187771883 + MGP_BALBcJ_P0024073 Esrrg protein_coding protein_coding MGP_BALBcJ_T0024074.1 MGP_BALBcJ_G0016861.1 mouse_genomes_project 1 187152512 187345898 + Esrrg protein_coding processed_transcript MGP_BALBcJ_T0024075.1 MGP_BALBcJ_G0016861.1 mouse_genomes_project 1 187552071 187772382 + MGP_BALBcJ_P0024075 Esrrg protein_coding protein_coding MGP_BALBcJ_T0024076.1 MGP_BALBcJ_G0016861.1 mouse_genomes_project 1 187552112 187772381 + MGP_BALBcJ_P0024076 Esrrg protein_coding protein_coding MGP_BALBcJ_T0019772.1 MGP_BALBcJ_G0015963.1 mouse_genomes_project 1 52245024 52288344 - MGP_BALBcJ_P0019772 Gtf3c3 protein_coding protein_coding MGP_BALBcJ_T0019773.1 MGP_BALBcJ_G0015963.1 mouse_genomes_project 1 52268718 52272741 - Gtf3c3 protein_coding retained_intron MGP_BALBcJ_T0019774.1 MGP_BALBcJ_G0015963.1 mouse_genomes_project 1 52275990 52277734 - Gtf3c3 protein_coding retained_intron MGP_BALBcJ_T0011239.1 MGP_BALBcJ_G0009364.1 mouse_genomes_project 1 190055639 190055952 - Gm23153 misc_RNA misc_RNA MGP_BALBcJ_T0023206.1 MGP_BALBcJ_G0016650.1 mouse_genomes_project 1 165648649 165668455 - MGP_BALBcJ_P0023206 Fmo9 protein_coding protein_coding MGP_BALBcJ_T0023207.1 MGP_BALBcJ_G0016650.1 mouse_genomes_project 1 165649882 165664297 - MGP_BALBcJ_P0023207 Fmo9 protein_coding protein_coding MGP_BALBcJ_T0000671.1 MGP_BALBcJ_G0000607.1 mouse_genomes_project 1 150020015 150022111 + TEC TEC MGP_BALBcJ_T0023229.1 MGP_BALBcJ_G0016655.1 mouse_genomes_project 1 166367856 166391184 - MGP_BALBcJ_P0023229 Mgst3 protein_coding protein_coding MGP_BALBcJ_T0005748.1 MGP_BALBcJ_G0004827.1 mouse_genomes_project 1 69918246 69941536 - Gm28818 lincRNA lincRNA MGP_BALBcJ_T0005749.1 MGP_BALBcJ_G0004827.1 mouse_genomes_project 1 69920925 69923115 - Gm28818 lincRNA lincRNA MGP_BALBcJ_T0011924.1 MGP_BALBcJ_G0010021.1 mouse_genomes_project 1 27209426 27210048 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011975.1 MGP_BALBcJ_G0010072.1 mouse_genomes_project 1 41708798 41709787 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022370.1 MGP_BALBcJ_G0016489.1 mouse_genomes_project 1 137122078 137137803 + MGP_BALBcJ_P0022370 Atp6v1g3 protein_coding protein_coding MGP_BALBcJ_T0021585.1 MGP_BALBcJ_G0016323.1 mouse_genomes_project 1 106062533 106074543 + MGP_BALBcJ_P0021585 protein_coding protein_coding MGP_BALBcJ_T0019183.1 MGP_BALBcJ_G0015848.1 mouse_genomes_project 1 31749681 31755682 + MGP_BALBcJ_P0019183 protein_coding protein_coding MGP_BALBcJ_T0019184.1 MGP_BALBcJ_G0015848.1 mouse_genomes_project 1 31749692 31751404 + MGP_BALBcJ_P0019184 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000486.1 MGP_BALBcJ_G0000424.1 mouse_genomes_project 1 59671887 59673237 + TEC TEC MGP_BALBcJ_T0002884.1 MGP_BALBcJ_G0002718.1 mouse_genomes_project 1 137361829 137395349 + Gm28501 antisense antisense MGP_BALBcJ_T0012050.1 MGP_BALBcJ_G0010147.1 mouse_genomes_project 1 61049771 61050017 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012128.1 MGP_BALBcJ_G0010225.1 mouse_genomes_project 1 98064405 98066251 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022002.1 MGP_BALBcJ_G0016414.1 mouse_genomes_project 1 131132416 131167172 - MGP_BALBcJ_P0022002 Tmcc2 protein_coding protein_coding MGP_BALBcJ_T0022003.1 MGP_BALBcJ_G0016414.1 mouse_genomes_project 1 131132417 131143987 - Tmcc2 protein_coding retained_intron MGP_BALBcJ_T0022004.1 MGP_BALBcJ_G0016414.1 mouse_genomes_project 1 131132417 131143988 - MGP_BALBcJ_P0022004 Tmcc2 protein_coding protein_coding MGP_BALBcJ_T0022005.1 MGP_BALBcJ_G0016414.1 mouse_genomes_project 1 131136700 131143173 - Tmcc2 protein_coding processed_transcript MGP_BALBcJ_T0022006.1 MGP_BALBcJ_G0016414.1 mouse_genomes_project 1 131137127 131141050 - Tmcc2 protein_coding processed_transcript MGP_BALBcJ_T0005966.1 MGP_BALBcJ_G0005001.1 mouse_genomes_project 1 169172297 169174688 - Gm37502 lincRNA lincRNA MGP_BALBcJ_T0006030.1 MGP_BALBcJ_G0005050.1 mouse_genomes_project 1 190849153 190871075 + Gm37168 lincRNA lincRNA MGP_BALBcJ_T0005843.1 MGP_BALBcJ_G0004903.1 mouse_genomes_project 1 111780242 111781234 + Gm28189 lincRNA lincRNA MGP_BALBcJ_T0022482.1 MGP_BALBcJ_G0016515.1 mouse_genomes_project 1 149038523 149044490 + MGP_BALBcJ_P0022482 protein_coding unknown_likely_coding MGP_BALBcJ_T0022483.1 MGP_BALBcJ_G0016515.1 mouse_genomes_project 1 149039034 149040029 + MGP_BALBcJ_P0022483 protein_coding protein_coding MGP_BALBcJ_T0021416.1 MGP_BALBcJ_G0016282.1 mouse_genomes_project 1 92022884 92038845 - MGP_BALBcJ_P0021416 Stk25 protein_coding protein_coding MGP_BALBcJ_T0021417.1 MGP_BALBcJ_G0016282.1 mouse_genomes_project 1 92025033 92038752 - Stk25 protein_coding retained_intron MGP_BALBcJ_T0021418.1 MGP_BALBcJ_G0016282.1 mouse_genomes_project 1 92025496 92028499 - Stk25 protein_coding retained_intron MGP_BALBcJ_T0021419.1 MGP_BALBcJ_G0016282.1 mouse_genomes_project 1 92026533 92028926 - Stk25 protein_coding retained_intron MGP_BALBcJ_T0021420.1 MGP_BALBcJ_G0016282.1 mouse_genomes_project 1 92028987 92038602 - MGP_BALBcJ_P0021420 Stk25 protein_coding protein_coding MGP_BALBcJ_T0021421.1 MGP_BALBcJ_G0016282.1 mouse_genomes_project 1 92030266 92062469 - MGP_BALBcJ_P0021421 Stk25 protein_coding protein_coding MGP_BALBcJ_T0000465.1 MGP_BALBcJ_G0000403.1 mouse_genomes_project 1 52370557 52372218 - TEC TEC MGP_BALBcJ_T0000559.1 MGP_BALBcJ_G0000497.1 mouse_genomes_project 1 90358377 90363972 + TEC TEC MGP_BALBcJ_T0002737.1 MGP_BALBcJ_G0002607.1 mouse_genomes_project 1 13274023 13289666 + Gm28095 antisense antisense MGP_BALBcJ_T0005949.1 MGP_BALBcJ_G0004988.1 mouse_genomes_project 1 163713408 163720844 - Gm36945 lincRNA lincRNA MGP_BALBcJ_T0005950.1 MGP_BALBcJ_G0004988.1 mouse_genomes_project 1 163713585 163720872 - Gm36945 lincRNA lincRNA MGP_BALBcJ_T0021998.1 MGP_BALBcJ_G0016413.1 mouse_genomes_project 1 131092586 131109806 + MGP_BALBcJ_P0021998 Nuak2 protein_coding protein_coding MGP_BALBcJ_T0021999.1 MGP_BALBcJ_G0016413.1 mouse_genomes_project 1 131092586 131110001 + MGP_BALBcJ_P0021999 Nuak2 protein_coding protein_coding MGP_BALBcJ_T0022000.1 MGP_BALBcJ_G0016413.1 mouse_genomes_project 1 131092625 131094197 + Nuak2 protein_coding processed_transcript MGP_BALBcJ_T0022001.1 MGP_BALBcJ_G0016413.1 mouse_genomes_project 1 131104051 131106971 + Nuak2 protein_coding retained_intron MGP_BALBcJ_T0099140.1 MGP_BALBcJ_G0037176.1 mouse_genomes_project 1 164820196 164820303 - Gm23402 snRNA snRNA MGP_BALBcJ_T0021213.1 MGP_BALBcJ_G0016239.1 mouse_genomes_project 1 89558461 89585414 + MGP_BALBcJ_P0021213 Ramp1 protein_coding protein_coding MGP_BALBcJ_T0021214.1 MGP_BALBcJ_G0016239.1 mouse_genomes_project 1 89558681 89585414 + MGP_BALBcJ_P0021214 Ramp1 protein_coding protein_coding MGP_BALBcJ_T0021215.1 MGP_BALBcJ_G0016239.1 mouse_genomes_project 1 89558685 89604003 + MGP_BALBcJ_P0021215 Ramp1 protein_coding protein_coding MGP_BALBcJ_T0005845.1 MGP_BALBcJ_G0004905.1 mouse_genomes_project 1 116984355 116990878 + Gm28867 lincRNA lincRNA MGP_BALBcJ_T0000750.1 MGP_BALBcJ_G0000686.1 mouse_genomes_project 1 176525382 176526178 - TEC TEC MGP_BALBcJ_T0012113.1 MGP_BALBcJ_G0010210.1 mouse_genomes_project 1 89550146 89550866 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000464.1 MGP_BALBcJ_G0000402.1 mouse_genomes_project 1 52003000 52005717 - TEC TEC MGP_BALBcJ_T0024170.1 MGP_BALBcJ_G0016880.1 mouse_genomes_project 1 190909099 190935465 + MGP_BALBcJ_P0024170 Tmem206 protein_coding protein_coding MGP_BALBcJ_T0020411.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72325108 72327634 + MGP_BALBcJ_P0020411 Pnkd protein_coding protein_coding MGP_BALBcJ_T0020412.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72325223 72394289 + MGP_BALBcJ_P0020412 Pnkd protein_coding protein_coding MGP_BALBcJ_T0020413.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72325228 72326814 + Pnkd protein_coding retained_intron MGP_BALBcJ_T0020414.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72325232 72387661 + Pnkd protein_coding retained_intron MGP_BALBcJ_T0020415.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72325233 72394299 + MGP_BALBcJ_P0020415 Pnkd protein_coding protein_coding MGP_BALBcJ_T0020416.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72325955 72327453 + Pnkd protein_coding retained_intron MGP_BALBcJ_T0020424.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72372194 72394291 + MGP_BALBcJ_P0020424 Pnkd protein_coding protein_coding MGP_BALBcJ_T0020425.1 MGP_BALBcJ_G0016084.1 mouse_genomes_project 1 72372247 72375846 + Pnkd protein_coding retained_intron MGP_BALBcJ_T0000416.1 MGP_BALBcJ_G0000355.1 mouse_genomes_project 1 22992235 22992565 - TEC TEC MGP_BALBcJ_T0000420.1 MGP_BALBcJ_G0000359.1 mouse_genomes_project 1 28122848 28126199 - TEC TEC MGP_BALBcJ_T0012318.1 MGP_BALBcJ_G0010415.1 mouse_genomes_project 1 177096000 177096610 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023857.1 MGP_BALBcJ_G0016814.1 mouse_genomes_project 1 180415490 180419287 + MGP_BALBcJ_P0023857 Pycr2 protein_coding protein_coding MGP_BALBcJ_T0023858.1 MGP_BALBcJ_G0016814.1 mouse_genomes_project 1 180415506 180417817 + Pycr2 protein_coding retained_intron MGP_BALBcJ_T0023859.1 MGP_BALBcJ_G0016814.1 mouse_genomes_project 1 180415520 180419286 + Pycr2 protein_coding retained_intron MGP_BALBcJ_T0023860.1 MGP_BALBcJ_G0016814.1 mouse_genomes_project 1 180417112 180418100 + Pycr2 protein_coding retained_intron MGP_BALBcJ_T0020404.1 MGP_BALBcJ_G0016082.1 mouse_genomes_project 1 72318728 72319803 + MGP_BALBcJ_P0020404 Gpbar1 protein_coding protein_coding MGP_BALBcJ_T0002911.1 MGP_BALBcJ_G0002740.1 mouse_genomes_project 1 161053813 161068264 + 2810442N19Rik antisense antisense MGP_BALBcJ_T0002912.1 MGP_BALBcJ_G0002740.1 mouse_genomes_project 1 161054016 161068273 + 2810442N19Rik antisense antisense MGP_BALBcJ_T0012233.1 MGP_BALBcJ_G0010330.1 mouse_genomes_project 1 140141059 140141621 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012081.1 MGP_BALBcJ_G0010178.1 mouse_genomes_project 1 73618097 73619773 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005933.1 MGP_BALBcJ_G0004975.1 mouse_genomes_project 1 159068380 159071007 - Gm37294 lincRNA lincRNA MGP_BALBcJ_T0006013.1 MGP_BALBcJ_G0005036.1 mouse_genomes_project 1 184966367 184974817 - Gm2061 lincRNA lincRNA MGP_BALBcJ_T0023501.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171262823 171309806 + MGP_BALBcJ_P0023501 Dcaf8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023502.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171262828 171303942 + Dcaf8 protein_coding retained_intron MGP_BALBcJ_T0023503.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171262857 171310518 + MGP_BALBcJ_P0023503 Dcaf8 protein_coding protein_coding MGP_BALBcJ_T0023504.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171262879 171305169 + Dcaf8 protein_coding retained_intron MGP_BALBcJ_T0023505.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171262881 171310477 + MGP_BALBcJ_P0023505 Dcaf8 protein_coding protein_coding MGP_BALBcJ_T0023506.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171262917 171311400 + MGP_BALBcJ_P0023506 Dcaf8 protein_coding protein_coding MGP_BALBcJ_T0023507.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171263684 171305169 + Dcaf8 protein_coding retained_intron MGP_BALBcJ_T0023508.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171289843 171292500 + Dcaf8 protein_coding retained_intron MGP_BALBcJ_T0023509.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171289947 171307946 + MGP_BALBcJ_P0023509 Dcaf8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023510.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171294579 171299095 + Dcaf8 protein_coding retained_intron MGP_BALBcJ_T0023511.1 MGP_BALBcJ_G0016719.1 mouse_genomes_project 1 171302741 171312017 + MGP_BALBcJ_P0023511 Dcaf8 protein_coding protein_coding MGP_BALBcJ_T0011874.1 MGP_BALBcJ_G0009971.1 mouse_genomes_project 1 9586671 9587965 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018978.1 MGP_BALBcJ_G0015803.1 mouse_genomes_project 1 15312975 15326732 - MGP_BALBcJ_P0018978 Defb41 protein_coding protein_coding MGP_BALBcJ_T0018979.1 MGP_BALBcJ_G0015803.1 mouse_genomes_project 1 15322117 15326674 - MGP_BALBcJ_P0018979 Defb41 protein_coding protein_coding MGP_BALBcJ_T0005675.1 MGP_BALBcJ_G0004778.1 mouse_genomes_project 1 39696144 39724605 - Gm28140 lincRNA lincRNA MGP_BALBcJ_T0012042.1 MGP_BALBcJ_G0010139.1 mouse_genomes_project 1 59089245 59092198 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016950.1 MGP_BALBcJ_G0015034.1 mouse_genomes_project 1 49669871 49751966 + Gm28177 processed_transcript processed_transcript MGP_BALBcJ_T0006026.1 MGP_BALBcJ_G0005047.1 mouse_genomes_project 1 190569775 190571761 + Gm31373 lincRNA lincRNA MGP_BALBcJ_T0098420.1 MGP_BALBcJ_G0036474.1 mouse_genomes_project 1 34297436 34297555 + n-R5s210 rRNA rRNA MGP_BALBcJ_T0011937.1 MGP_BALBcJ_G0010034.1 mouse_genomes_project 1 30478417 30479784 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000779.1 MGP_BALBcJ_G0000713.1 mouse_genomes_project 1 186629994 186632946 - TEC TEC MGP_BALBcJ_T0012248.1 MGP_BALBcJ_G0010345.1 mouse_genomes_project 1 147882681 147883163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102082.1 MGP_BALBcJ_G0039899.1 mouse_genomes_project 1 116313302 116317690 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0022278.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660893 134677142 + MGP_BALBcJ_P0022278 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022279.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660925 134677142 + MGP_BALBcJ_P0022279 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022280.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660929 134664252 + Tnnt2 protein_coding retained_intron MGP_BALBcJ_T0022281.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660929 134669283 + Tnnt2 protein_coding retained_intron MGP_BALBcJ_T0022282.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660941 134672580 + MGP_BALBcJ_P0022282 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022283.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660949 134677142 + MGP_BALBcJ_P0022283 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022284.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134660952 134677142 + MGP_BALBcJ_P0022284 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022285.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665231 134673990 + MGP_BALBcJ_P0022285 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022286.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665389 134677142 + MGP_BALBcJ_P0022286 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022287.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665407 134677142 + MGP_BALBcJ_P0022287 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022288.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665407 134677142 + MGP_BALBcJ_P0022288 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022289.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665407 134677142 + MGP_BALBcJ_P0022289 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022290.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665407 134677142 + MGP_BALBcJ_P0022290 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022291.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134665407 134677142 + MGP_BALBcJ_P0022291 Tnnt2 protein_coding protein_coding MGP_BALBcJ_T0022292.1 MGP_BALBcJ_G0016473.1 mouse_genomes_project 1 134673980 134674272 + Tnnt2 protein_coding retained_intron MGP_BALBcJ_T0005975.1 MGP_BALBcJ_G0005010.1 mouse_genomes_project 1 176953339 176954741 - 2310043L19Rik lincRNA lincRNA MGP_BALBcJ_T0012071.1 MGP_BALBcJ_G0010168.1 mouse_genomes_project 1 69047886 69048265 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000701.1 MGP_BALBcJ_G0000637.1 mouse_genomes_project 1 159348149 159349294 - TEC TEC MGP_BALBcJ_T0021460.1 MGP_BALBcJ_G0016291.1 mouse_genomes_project 1 92282248 92306264 + protein_coding processed_transcript MGP_BALBcJ_T0021461.1 MGP_BALBcJ_G0016291.1 mouse_genomes_project 1 92282287 92390445 + MGP_BALBcJ_P0021461 protein_coding protein_coding MGP_BALBcJ_T0021463.1 MGP_BALBcJ_G0016291.1 mouse_genomes_project 1 92282778 92306478 + MGP_BALBcJ_P0021463 protein_coding protein_coding MGP_BALBcJ_T0098426.1 MGP_BALBcJ_G0036480.1 mouse_genomes_project 1 83788846 83788950 + n-R5s215 rRNA rRNA MGP_BALBcJ_T0009476.1 MGP_BALBcJ_G0007601.1 mouse_genomes_project 1 72434398 72434483 + Mir26b miRNA miRNA MGP_BALBcJ_T0005899.1 MGP_BALBcJ_G0004948.1 mouse_genomes_project 1 136812828 136816216 + A430106G13Rik lincRNA lincRNA MGP_BALBcJ_T0011977.1 MGP_BALBcJ_G0010074.1 mouse_genomes_project 1 41997102 41997522 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098430.1 MGP_BALBcJ_G0036484.1 mouse_genomes_project 1 117264106 117264223 - Gm22094 rRNA rRNA MGP_BALBcJ_T0011884.1 MGP_BALBcJ_G0009981.1 mouse_genomes_project 1 13827190 13829050 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023583.1 MGP_BALBcJ_G0016743.1 mouse_genomes_project 1 172334687 172340614 - MGP_BALBcJ_P0023583 Fcer1a protein_coding protein_coding MGP_BALBcJ_T0023584.1 MGP_BALBcJ_G0016743.1 mouse_genomes_project 1 172334796 172340594 - MGP_BALBcJ_P0023584 Fcer1a protein_coding protein_coding MGP_BALBcJ_T0101820.1 MGP_BALBcJ_G0039753.1 mouse_genomes_project 1 15087858 15113322 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101821.1 MGP_BALBcJ_G0039753.1 mouse_genomes_project 1 15102400 15112801 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0000368.1 MGP_BALBcJ_G0000309.1 mouse_genomes_project 1 8424465 8427504 - TEC TEC MGP_BALBcJ_T0012007.1 MGP_BALBcJ_G0010104.1 mouse_genomes_project 1 48131417 48131579 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011911.1 MGP_BALBcJ_G0010008.1 mouse_genomes_project 1 22065564 22066760 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000563.1 MGP_BALBcJ_G0000501.1 mouse_genomes_project 1 94075660 94077395 - TEC TEC MGP_BALBcJ_T0005699.1 MGP_BALBcJ_G0004790.1 mouse_genomes_project 1 48806497 48809017 + Gm29325 lincRNA lincRNA MGP_BALBcJ_T0098433.1 MGP_BALBcJ_G0036487.1 mouse_genomes_project 1 137715975 137716091 - n-R5s217 rRNA rRNA MGP_BALBcJ_T0011861.1 MGP_BALBcJ_G0009958.1 mouse_genomes_project 1 6480641 6481277 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012298.1 MGP_BALBcJ_G0010395.1 mouse_genomes_project 1 165787631 165787943 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023495.1 MGP_BALBcJ_G0016718.1 mouse_genomes_project 1 171241098 171249912 + MGP_BALBcJ_P0023495 Pex19 protein_coding protein_coding MGP_BALBcJ_T0023496.1 MGP_BALBcJ_G0016718.1 mouse_genomes_project 1 171241099 171245341 + Pex19 protein_coding retained_intron MGP_BALBcJ_T0023497.1 MGP_BALBcJ_G0016718.1 mouse_genomes_project 1 171241105 171251170 + MGP_BALBcJ_P0023497 Pex19 protein_coding protein_coding MGP_BALBcJ_T0023498.1 MGP_BALBcJ_G0016718.1 mouse_genomes_project 1 171241116 171244507 + Pex19 protein_coding retained_intron MGP_BALBcJ_T0023499.1 MGP_BALBcJ_G0016718.1 mouse_genomes_project 1 171241116 171243234 + Pex19 protein_coding retained_intron MGP_BALBcJ_T0023500.1 MGP_BALBcJ_G0016718.1 mouse_genomes_project 1 171248588 171249329 + Pex19 protein_coding retained_intron MGP_BALBcJ_T0023627.1 MGP_BALBcJ_G0016766.1 mouse_genomes_project 1 173696514 173697444 + MGP_BALBcJ_P0023627 Olfr417 protein_coding protein_coding MGP_BALBcJ_T0019572.1 MGP_BALBcJ_G0015925.1 mouse_genomes_project 1 41492179 41504434 - MGP_BALBcJ_P0019572 Kdelc1 protein_coding protein_coding MGP_BALBcJ_T0019573.1 MGP_BALBcJ_G0015925.1 mouse_genomes_project 1 41492518 41504379 - Kdelc1 protein_coding retained_intron MGP_BALBcJ_T0019574.1 MGP_BALBcJ_G0015925.1 mouse_genomes_project 1 41492520 41504391 - MGP_BALBcJ_P0019574 Kdelc1 protein_coding protein_coding MGP_BALBcJ_T0019575.1 MGP_BALBcJ_G0015925.1 mouse_genomes_project 1 41497716 41504391 - Kdelc1 protein_coding retained_intron MGP_BALBcJ_T0019576.1 MGP_BALBcJ_G0015925.1 mouse_genomes_project 1 41500417 41504327 - MGP_BALBcJ_P0019576 Kdelc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019441.1 MGP_BALBcJ_G0015896.1 mouse_genomes_project 1 36858725 36870275 + MGP_BALBcJ_P0019441 Cnot11 protein_coding protein_coding MGP_BALBcJ_T0019442.1 MGP_BALBcJ_G0015896.1 mouse_genomes_project 1 36859535 36870259 + MGP_BALBcJ_P0019442 Cnot11 protein_coding protein_coding MGP_BALBcJ_T0019443.1 MGP_BALBcJ_G0015896.1 mouse_genomes_project 1 36861978 36869869 + Cnot11 protein_coding retained_intron MGP_BALBcJ_T0019444.1 MGP_BALBcJ_G0015896.1 mouse_genomes_project 1 36863767 36868787 + MGP_BALBcJ_P0019444 Cnot11 protein_coding protein_coding MGP_BALBcJ_T0000481.1 MGP_BALBcJ_G0000419.1 mouse_genomes_project 1 58832537 58833936 + TEC TEC MGP_BALBcJ_T0000592.1 MGP_BALBcJ_G0000530.1 mouse_genomes_project 1 122142636 122145852 - TEC TEC MGP_BALBcJ_T0021444.1 MGP_BALBcJ_G0016286.1 mouse_genomes_project 1 92204576 92214272 - MGP_BALBcJ_P0021444 Dtymk protein_coding protein_coding MGP_BALBcJ_T0021445.1 MGP_BALBcJ_G0016286.1 mouse_genomes_project 1 92204724 92211053 - MGP_BALBcJ_P0021445 Dtymk protein_coding protein_coding MGP_BALBcJ_T0021446.1 MGP_BALBcJ_G0016286.1 mouse_genomes_project 1 92210431 92211413 - Dtymk protein_coding processed_transcript MGP_BALBcJ_T0021447.1 MGP_BALBcJ_G0016286.1 mouse_genomes_project 1 92212419 92214244 - MGP_BALBcJ_P0021447 Dtymk protein_coding protein_coding MGP_BALBcJ_T0023012.1 MGP_BALBcJ_G0016606.1 mouse_genomes_project 1 161826930 161845175 - MGP_BALBcJ_P0023012 Fmo4 protein_coding protein_coding MGP_BALBcJ_T0023013.1 MGP_BALBcJ_G0016606.1 mouse_genomes_project 1 161827625 161844053 - MGP_BALBcJ_P0023013 Fmo4 protein_coding protein_coding MGP_BALBcJ_T0023014.1 MGP_BALBcJ_G0016606.1 mouse_genomes_project 1 161834423 161845175 - Fmo4 protein_coding retained_intron MGP_BALBcJ_T0023015.1 MGP_BALBcJ_G0016606.1 mouse_genomes_project 1 161835179 161840035 - Fmo4 protein_coding retained_intron MGP_BALBcJ_T0023016.1 MGP_BALBcJ_G0016606.1 mouse_genomes_project 1 161839077 161845430 - MGP_BALBcJ_P0023016 Fmo4 protein_coding protein_coding MGP_BALBcJ_T0023017.1 MGP_BALBcJ_G0016606.1 mouse_genomes_project 1 161839845 161845476 - MGP_BALBcJ_P0023017 Fmo4 protein_coding protein_coding MGP_BALBcJ_T0098439.1 MGP_BALBcJ_G0036493.1 mouse_genomes_project 1 181395495 181395611 - Gm26004 rRNA rRNA MGP_BALBcJ_T0011908.1 MGP_BALBcJ_G0010005.1 mouse_genomes_project 1 20481524 20482168 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020860.1 MGP_BALBcJ_G0016162.1 mouse_genomes_project 1 81285759 81304890 + Daw1 protein_coding retained_intron MGP_BALBcJ_T0020861.1 MGP_BALBcJ_G0016162.1 mouse_genomes_project 1 81285769 81336339 + MGP_BALBcJ_P0020861 Daw1 protein_coding protein_coding MGP_BALBcJ_T0020862.1 MGP_BALBcJ_G0016162.1 mouse_genomes_project 1 81285769 81336345 + MGP_BALBcJ_P0020862 Daw1 protein_coding protein_coding MGP_BALBcJ_T0020863.1 MGP_BALBcJ_G0016162.1 mouse_genomes_project 1 81285776 81336341 + MGP_BALBcJ_P0020863 Daw1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020864.1 MGP_BALBcJ_G0016162.1 mouse_genomes_project 1 81285788 81336345 + MGP_BALBcJ_P0020864 Daw1 protein_coding protein_coding MGP_BALBcJ_T0019051.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21151657 21167332 - MGP_BALBcJ_P0019051 Fam135a protein_coding protein_coding MGP_BALBcJ_T0019052.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21151657 21222429 - MGP_BALBcJ_P0019052 Fam135a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019053.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21151809 21234904 - MGP_BALBcJ_P0019053 Fam135a protein_coding protein_coding MGP_BALBcJ_T0019054.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21152155 21234892 - MGP_BALBcJ_P0019054 Fam135a protein_coding protein_coding MGP_BALBcJ_T0019055.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21152168 21169659 - MGP_BALBcJ_P0019055 Fam135a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019056.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21152245 21235043 - MGP_BALBcJ_P0019056 Fam135a protein_coding protein_coding MGP_BALBcJ_T0019057.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21164848 21169023 - MGP_BALBcJ_P0019057 Fam135a protein_coding protein_coding MGP_BALBcJ_T0019058.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21169294 21234926 - MGP_BALBcJ_P0019058 Fam135a protein_coding protein_coding MGP_BALBcJ_T0019059.1 MGP_BALBcJ_G0015825.1 mouse_genomes_project 1 21192258 21235051 - Fam135a protein_coding retained_intron MGP_BALBcJ_T0021104.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86007123 86109126 + MGP_BALBcJ_P0021104 Dgkd protein_coding protein_coding MGP_BALBcJ_T0021105.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86043136 86079189 + Dgkd protein_coding retained_intron MGP_BALBcJ_T0021106.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86081342 86085416 + Dgkd protein_coding retained_intron MGP_BALBcJ_T0021107.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86095426 86102889 + MGP_BALBcJ_P0021107 Dgkd protein_coding protein_coding MGP_BALBcJ_T0021108.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86099032 86109816 + MGP_BALBcJ_P0021108 Dgkd protein_coding protein_coding MGP_BALBcJ_T0021109.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86099918 86104901 + Dgkd protein_coding retained_intron MGP_BALBcJ_T0021110.1 MGP_BALBcJ_G0016209.1 mouse_genomes_project 1 86103020 86109814 + MGP_BALBcJ_P0021110 Dgkd protein_coding protein_coding MGP_BALBcJ_T0012127.1 MGP_BALBcJ_G0010224.1 mouse_genomes_project 1 97189180 97189894 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011918.1 MGP_BALBcJ_G0010015.1 mouse_genomes_project 1 25091091 25091745 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099150.1 MGP_BALBcJ_G0037186.1 mouse_genomes_project 1 175111623 175111799 + Gm25560 snRNA snRNA MGP_BALBcJ_T0023855.1 MGP_BALBcJ_G0016813.1 mouse_genomes_project 1 180404377 180410315 + MGP_BALBcJ_P0023855 Lefty2 protein_coding protein_coding MGP_BALBcJ_T0023856.1 MGP_BALBcJ_G0016813.1 mouse_genomes_project 1 180405727 180408757 + Lefty2 protein_coding retained_intron MGP_BALBcJ_T0024064.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186755887 186776332 + Gpatch2 protein_coding processed_transcript MGP_BALBcJ_T0024065.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186755890 186889669 + MGP_BALBcJ_P0024065 Gpatch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024066.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186755901 186891733 + MGP_BALBcJ_P0024066 Gpatch2 protein_coding protein_coding MGP_BALBcJ_T0024067.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186755917 186845509 + Gpatch2 protein_coding retained_intron MGP_BALBcJ_T0024068.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186755923 186774918 + MGP_BALBcJ_P0024068 Gpatch2 protein_coding protein_coding MGP_BALBcJ_T0024069.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186755925 186774402 + MGP_BALBcJ_P0024069 Gpatch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024070.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186756003 186891730 + MGP_BALBcJ_P0024070 Gpatch2 protein_coding protein_coding MGP_BALBcJ_T0024071.1 MGP_BALBcJ_G0016860.1 mouse_genomes_project 1 186756122 186890752 + MGP_BALBcJ_P0024071 Gpatch2 protein_coding protein_coding MGP_BALBcJ_T0022095.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132411444 132454719 - MGP_BALBcJ_P0022095 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022096.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132411453 132454781 - MGP_BALBcJ_P0022096 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022098.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132416172 132418814 - Zc3h11a protein_coding processed_transcript MGP_BALBcJ_T0022099.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132418711 132431639 - MGP_BALBcJ_P0022099 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022100.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132431352 132454779 - MGP_BALBcJ_P0022100 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022101.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132431610 132454759 - MGP_BALBcJ_P0022101 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022102.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132433211 132454761 - Zc3h11a protein_coding retained_intron MGP_BALBcJ_T0022103.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132433502 132454683 - MGP_BALBcJ_P0022103 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022104.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132438625 132454697 - MGP_BALBcJ_P0022104 Zc3h11a protein_coding protein_coding MGP_BALBcJ_T0022105.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132440061 132454682 - Zc3h11a protein_coding retained_intron MGP_BALBcJ_T0022106.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132440314 132454769 - Zc3h11a protein_coding processed_transcript MGP_BALBcJ_T0022107.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132447822 132454760 - Zc3h11a protein_coding processed_transcript MGP_BALBcJ_T0022108.1 MGP_BALBcJ_G0016432.1 mouse_genomes_project 1 132448166 132454781 - Zc3h11a protein_coding retained_intron MGP_BALBcJ_T0000766.1 MGP_BALBcJ_G0000701.1 mouse_genomes_project 1 181562190 181564197 - TEC TEC MGP_BALBcJ_T0019486.1 MGP_BALBcJ_G0015906.1 mouse_genomes_project 1 37805308 37831037 + MGP_BALBcJ_P0019486 Il18r1 protein_coding protein_coding MGP_BALBcJ_T0019487.1 MGP_BALBcJ_G0015906.1 mouse_genomes_project 1 37805432 37831039 + MGP_BALBcJ_P0019487 Il18r1 protein_coding protein_coding MGP_BALBcJ_T0019488.1 MGP_BALBcJ_G0015906.1 mouse_genomes_project 1 37805726 37831037 + MGP_BALBcJ_P0019488 Il18r1 protein_coding protein_coding MGP_BALBcJ_T0019489.1 MGP_BALBcJ_G0015906.1 mouse_genomes_project 1 37805762 37840312 + MGP_BALBcJ_P0019489 Il18r1 protein_coding protein_coding MGP_BALBcJ_T0019490.1 MGP_BALBcJ_G0015906.1 mouse_genomes_project 1 37805762 37840313 + MGP_BALBcJ_P0019490 Il18r1 protein_coding protein_coding MGP_BALBcJ_T0019491.1 MGP_BALBcJ_G0015906.1 mouse_genomes_project 1 37805762 37840292 + MGP_BALBcJ_P0019491 Il18r1 protein_coding protein_coding MGP_BALBcJ_T0099107.1 MGP_BALBcJ_G0037143.1 mouse_genomes_project 1 85570621 85570716 - Gm23504 snRNA snRNA MGP_BALBcJ_T0011769.1 MGP_BALBcJ_G0009894.1 mouse_genomes_project 1 106054610 106074693 + MGP_BALBcJ_P0011769 polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011770.1 MGP_BALBcJ_G0009894.1 mouse_genomes_project 1 106054634 106076742 + polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0011771.1 MGP_BALBcJ_G0009894.1 mouse_genomes_project 1 106057978 106074543 + MGP_BALBcJ_P0011771 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0019503.1 MGP_BALBcJ_G0015910.1 mouse_genomes_project 1 38115930 38134317 - MGP_BALBcJ_P0019503 Mfsd9 protein_coding protein_coding MGP_BALBcJ_T0019504.1 MGP_BALBcJ_G0015910.1 mouse_genomes_project 1 38115933 38134341 - MGP_BALBcJ_P0019504 Mfsd9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019505.1 MGP_BALBcJ_G0015910.1 mouse_genomes_project 1 38125032 38134311 - Mfsd9 protein_coding retained_intron MGP_BALBcJ_T0000651.1 MGP_BALBcJ_G0000587.1 mouse_genomes_project 1 137802205 137804585 - TEC TEC MGP_BALBcJ_T0009449.1 MGP_BALBcJ_G0007574.1 mouse_genomes_project 1 27264547 27264657 + Gm23771 miRNA miRNA MGP_BALBcJ_T0005867.1 MGP_BALBcJ_G0004921.1 mouse_genomes_project 1 123217533 123579085 - lincRNA lincRNA MGP_BALBcJ_T0023575.1 MGP_BALBcJ_G0016737.1 mouse_genomes_project 1 172009790 172010871 - MGP_BALBcJ_P0023575 Apcs protein_coding protein_coding MGP_BALBcJ_T0022750.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155286849 155383804 - MGP_BALBcJ_P0022750 Axdnd1 protein_coding protein_coding MGP_BALBcJ_T0022751.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155286849 155385973 - MGP_BALBcJ_P0022751 Axdnd1 protein_coding protein_coding MGP_BALBcJ_T0022752.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155293882 155383876 - MGP_BALBcJ_P0022752 Axdnd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0022753.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155293882 155384922 - MGP_BALBcJ_P0022753 Axdnd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0022754.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155321027 155339468 - Axdnd1 protein_coding processed_transcript MGP_BALBcJ_T0022755.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155328494 155363534 - Axdnd1 protein_coding processed_transcript MGP_BALBcJ_T0022756.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155329087 155362087 - MGP_BALBcJ_P0022756 Axdnd1 protein_coding protein_coding MGP_BALBcJ_T0022757.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155363594 155366323 - Axdnd1 protein_coding processed_transcript MGP_BALBcJ_T0022758.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155383854 155385380 - MGP_BALBcJ_P0022758 Axdnd1 protein_coding protein_coding MGP_BALBcJ_T0022759.1 MGP_BALBcJ_G0016565.1 mouse_genomes_project 1 155383854 155385416 - MGP_BALBcJ_P0022759 Axdnd1 protein_coding protein_coding MGP_BALBcJ_T0018911.1 MGP_BALBcJ_G0015789.1 mouse_genomes_project 1 13111491 13123095 - MGP_BALBcJ_P0018911 4930444P10Rik protein_coding protein_coding MGP_BALBcJ_T0018912.1 MGP_BALBcJ_G0015789.1 mouse_genomes_project 1 13111491 13135849 - MGP_BALBcJ_P0018912 4930444P10Rik protein_coding protein_coding MGP_BALBcJ_T0018913.1 MGP_BALBcJ_G0015789.1 mouse_genomes_project 1 13111491 13135849 - MGP_BALBcJ_P0018913 4930444P10Rik protein_coding protein_coding MGP_BALBcJ_T0002967.1 MGP_BALBcJ_G0002785.1 mouse_genomes_project 1 189433504 189438167 + Gm37422 antisense antisense MGP_BALBcJ_T0002816.1 MGP_BALBcJ_G0002664.1 mouse_genomes_project 1 72946623 72951902 + Gm15841 antisense antisense MGP_BALBcJ_T0000724.1 MGP_BALBcJ_G0000660.1 mouse_genomes_project 1 164591580 164592389 + TEC TEC MGP_BALBcJ_T0020690.1 MGP_BALBcJ_G0016126.1 mouse_genomes_project 1 73436852 73461016 + MGP_BALBcJ_P0020690 Asic4 protein_coding protein_coding MGP_BALBcJ_T0020691.1 MGP_BALBcJ_G0016126.1 mouse_genomes_project 1 73437115 73461019 + MGP_BALBcJ_P0020691 Asic4 protein_coding protein_coding MGP_BALBcJ_T0102066.1 MGP_BALBcJ_G0039883.1 mouse_genomes_project 1 86387553 86388337 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005705.1 MGP_BALBcJ_G0004794.1 mouse_genomes_project 1 50113119 50173164 + Gm553 lincRNA lincRNA MGP_BALBcJ_T0005911.1 MGP_BALBcJ_G0004958.1 mouse_genomes_project 1 149937014 149940552 + Gm29188 lincRNA lincRNA MGP_BALBcJ_T0023951.1 MGP_BALBcJ_G0016835.1 mouse_genomes_project 1 182329129 182420164 + MGP_BALBcJ_P0023951 Susd4 protein_coding protein_coding MGP_BALBcJ_T0023952.1 MGP_BALBcJ_G0016835.1 mouse_genomes_project 1 182329281 182462466 + MGP_BALBcJ_P0023952 Susd4 protein_coding protein_coding MGP_BALBcJ_T0023953.1 MGP_BALBcJ_G0016835.1 mouse_genomes_project 1 182329664 182398638 + MGP_BALBcJ_P0023953 Susd4 protein_coding protein_coding MGP_BALBcJ_T0023954.1 MGP_BALBcJ_G0016835.1 mouse_genomes_project 1 182329825 182398664 + MGP_BALBcJ_P0023954 Susd4 protein_coding protein_coding MGP_BALBcJ_T0023955.1 MGP_BALBcJ_G0016835.1 mouse_genomes_project 1 182330164 182463825 + MGP_BALBcJ_P0023955 Susd4 protein_coding protein_coding MGP_BALBcJ_T0023042.1 MGP_BALBcJ_G0016613.1 mouse_genomes_project 1 162400814 162419579 - MGP_BALBcJ_P0023042 Gorab protein_coding protein_coding MGP_BALBcJ_T0023043.1 MGP_BALBcJ_G0016613.1 mouse_genomes_project 1 162400818 162419566 - MGP_BALBcJ_P0023043 Gorab protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023044.1 MGP_BALBcJ_G0016613.1 mouse_genomes_project 1 162410327 162419521 - Gorab protein_coding retained_intron MGP_BALBcJ_T0098421.1 MGP_BALBcJ_G0036475.1 mouse_genomes_project 1 44393764 44393883 + n-R5s211 rRNA rRNA MGP_BALBcJ_T0000756.1 MGP_BALBcJ_G0000691.1 mouse_genomes_project 1 179644580 179647251 - TEC TEC MGP_BALBcJ_T0012252.1 MGP_BALBcJ_G0010349.1 mouse_genomes_project 1 148136610 148138146 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098422.1 MGP_BALBcJ_G0036476.1 mouse_genomes_project 1 71787225 71787351 + Gm25329 rRNA rRNA MGP_BALBcJ_T0000629.1 MGP_BALBcJ_G0000566.1 mouse_genomes_project 1 133252146 133253128 - TEC TEC MGP_BALBcJ_T0019346.1 MGP_BALBcJ_G0015877.1 mouse_genomes_project 1 34743982 34836950 - MGP_BALBcJ_P0019346 Mgat4a protein_coding protein_coding MGP_BALBcJ_T0019347.1 MGP_BALBcJ_G0015877.1 mouse_genomes_project 1 34745615 34841504 - MGP_BALBcJ_P0019347 Mgat4a protein_coding protein_coding MGP_BALBcJ_T0019348.1 MGP_BALBcJ_G0015877.1 mouse_genomes_project 1 34762963 34795779 - MGP_BALBcJ_P0019348 Mgat4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019349.1 MGP_BALBcJ_G0015877.1 mouse_genomes_project 1 34762966 34795741 - MGP_BALBcJ_P0019349 Mgat4a protein_coding protein_coding MGP_BALBcJ_T0019350.1 MGP_BALBcJ_G0015877.1 mouse_genomes_project 1 34795371 34798484 - Mgat4a protein_coding retained_intron MGP_BALBcJ_T0019351.1 MGP_BALBcJ_G0015877.1 mouse_genomes_project 1 34833759 34836797 - Mgat4a protein_coding retained_intron MGP_BALBcJ_T0006010.1 MGP_BALBcJ_G0005033.1 mouse_genomes_project 1 184600316 184605554 + 4930433J02Rik lincRNA lincRNA MGP_BALBcJ_T0022476.1 MGP_BALBcJ_G0016514.1 mouse_genomes_project 1 148768639 148872229 - MGP_BALBcJ_P0022476 Pla2g4a protein_coding protein_coding MGP_BALBcJ_T0022477.1 MGP_BALBcJ_G0016514.1 mouse_genomes_project 1 148768650 148862125 - MGP_BALBcJ_P0022477 Pla2g4a protein_coding protein_coding MGP_BALBcJ_T0022478.1 MGP_BALBcJ_G0016514.1 mouse_genomes_project 1 148825445 148901865 - MGP_BALBcJ_P0022478 Pla2g4a protein_coding protein_coding MGP_BALBcJ_T0022479.1 MGP_BALBcJ_G0016514.1 mouse_genomes_project 1 148825485 148841769 - Pla2g4a protein_coding processed_transcript MGP_BALBcJ_T0022480.1 MGP_BALBcJ_G0016514.1 mouse_genomes_project 1 148858562 148901891 - Pla2g4a protein_coding retained_intron MGP_BALBcJ_T0022481.1 MGP_BALBcJ_G0016514.1 mouse_genomes_project 1 148872045 148901862 - Pla2g4a protein_coding processed_transcript MGP_BALBcJ_T0019016.1 MGP_BALBcJ_G0015815.1 mouse_genomes_project 1 18471124 18496171 + MGP_BALBcJ_P0019016 protein_coding protein_coding MGP_BALBcJ_T0009459.1 MGP_BALBcJ_G0007584.1 mouse_genomes_project 1 42615165 42615306 + miRNA miRNA MGP_BALBcJ_T0024016.1 MGP_BALBcJ_G0016849.1 mouse_genomes_project 1 184413940 184518295 - MGP_BALBcJ_P0024016 Mark1 protein_coding protein_coding MGP_BALBcJ_T0024017.1 MGP_BALBcJ_G0016849.1 mouse_genomes_project 1 184436661 184518200 - MGP_BALBcJ_P0024017 Mark1 protein_coding protein_coding MGP_BALBcJ_T0005990.1 MGP_BALBcJ_G0005020.1 mouse_genomes_project 1 181842866 181858513 + 1700047M11Rik lincRNA lincRNA MGP_BALBcJ_T0005991.1 MGP_BALBcJ_G0005020.1 mouse_genomes_project 1 181856021 181858475 + 1700047M11Rik lincRNA lincRNA MGP_BALBcJ_T0002870.1 MGP_BALBcJ_G0002708.1 mouse_genomes_project 1 132038388 132058323 - Gm19461 antisense antisense MGP_BALBcJ_T0002871.1 MGP_BALBcJ_G0002708.1 mouse_genomes_project 1 132039198 132045100 - Gm19461 antisense antisense MGP_BALBcJ_T0002872.1 MGP_BALBcJ_G0002708.1 mouse_genomes_project 1 132041893 132042283 - Gm19461 antisense antisense MGP_BALBcJ_T0002873.1 MGP_BALBcJ_G0002708.1 mouse_genomes_project 1 132042273 132044334 - Gm19461 antisense antisense MGP_BALBcJ_T0002874.1 MGP_BALBcJ_G0002708.1 mouse_genomes_project 1 132044522 132046654 - Gm19461 antisense antisense MGP_BALBcJ_T0023946.1 MGP_BALBcJ_G0016833.1 mouse_genomes_project 1 182123984 182170086 + Capn8 protein_coding processed_transcript MGP_BALBcJ_T0023947.1 MGP_BALBcJ_G0016833.1 mouse_genomes_project 1 182123989 182196685 + MGP_BALBcJ_P0023947 Capn8 protein_coding protein_coding MGP_BALBcJ_T0023948.1 MGP_BALBcJ_G0016833.1 mouse_genomes_project 1 182124015 182196573 + MGP_BALBcJ_P0023948 Capn8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023949.1 MGP_BALBcJ_G0016833.1 mouse_genomes_project 1 182124038 182196440 + MGP_BALBcJ_P0023949 Capn8 protein_coding unknown_likely_coding MGP_BALBcJ_T0009490.1 MGP_BALBcJ_G0007615.1 mouse_genomes_project 1 86178767 86178877 + Gm25198 miRNA miRNA MGP_BALBcJ_T0012330.1 MGP_BALBcJ_G0010427.1 mouse_genomes_project 1 181947773 181948766 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019508.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40227797 40282870 + MGP_BALBcJ_P0019508 Mrps9 protein_coding protein_coding MGP_BALBcJ_T0019509.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40227799 40276860 + Mrps9 protein_coding processed_transcript MGP_BALBcJ_T0019510.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40227799 40279194 + Mrps9 protein_coding processed_transcript MGP_BALBcJ_T0019511.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40227808 40258936 + Mrps9 protein_coding retained_intron MGP_BALBcJ_T0019512.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40239266 40276309 + Mrps9 protein_coding retained_intron MGP_BALBcJ_T0019513.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40264917 40282864 + MGP_BALBcJ_P0019513 Mrps9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019514.1 MGP_BALBcJ_G0015913.1 mouse_genomes_project 1 40280237 40282864 + Mrps9 protein_coding retained_intron MGP_BALBcJ_T0020525.1 MGP_BALBcJ_G0016104.1 mouse_genomes_project 1 72933834 72937037 - MGP_BALBcJ_P0020525 Cryba2 protein_coding protein_coding MGP_BALBcJ_T0020526.1 MGP_BALBcJ_G0016104.1 mouse_genomes_project 1 72934431 72936786 - MGP_BALBcJ_P0020526 Cryba2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000591.1 MGP_BALBcJ_G0000529.1 mouse_genomes_project 1 122072067 122074127 - TEC TEC MGP_BALBcJ_T0005764.1 MGP_BALBcJ_G0004837.1 mouse_genomes_project 1 71639498 71767628 - 6030407O03Rik lincRNA lincRNA MGP_BALBcJ_T0005765.1 MGP_BALBcJ_G0004837.1 mouse_genomes_project 1 71639498 71899418 - 6030407O03Rik lincRNA lincRNA MGP_BALBcJ_T0000536.1 MGP_BALBcJ_G0000474.1 mouse_genomes_project 1 82762820 82767063 - TEC TEC MGP_BALBcJ_T0020275.1 MGP_BALBcJ_G0016054.1 mouse_genomes_project 1 64797630 64829980 - MGP_BALBcJ_P0020275 Acadl protein_coding protein_coding MGP_BALBcJ_T0020276.1 MGP_BALBcJ_G0016054.1 mouse_genomes_project 1 64812163 64825034 - Acadl protein_coding processed_transcript MGP_BALBcJ_T0012173.1 MGP_BALBcJ_G0010270.1 mouse_genomes_project 1 113682460 113683034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009474.1 MGP_BALBcJ_G0007599.1 mouse_genomes_project 1 71889835 71889934 - Mir6351 miRNA miRNA MGP_BALBcJ_T0000419.1 MGP_BALBcJ_G0000358.1 mouse_genomes_project 1 28093330 28096213 - TEC TEC MGP_BALBcJ_T0002947.1 MGP_BALBcJ_G0002768.1 mouse_genomes_project 1 179754499 179771174 + Gm31728 antisense antisense MGP_BALBcJ_T0005655.1 MGP_BALBcJ_G0004763.1 mouse_genomes_project 1 33260554 33264968 - Gm37146 lincRNA lincRNA MGP_BALBcJ_T0002931.1 MGP_BALBcJ_G0002754.1 mouse_genomes_project 1 169989710 169994084 + Gm38204 antisense antisense MGP_BALBcJ_T0019806.1 MGP_BALBcJ_G0015968.1 mouse_genomes_project 1 52937912 52948986 - MGP_BALBcJ_P0019806 Hspd1 protein_coding protein_coding MGP_BALBcJ_T0019807.1 MGP_BALBcJ_G0015968.1 mouse_genomes_project 1 52937945 52949020 - MGP_BALBcJ_P0019807 Hspd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0019808.1 MGP_BALBcJ_G0015968.1 mouse_genomes_project 1 52943303 52949205 - MGP_BALBcJ_P0019808 Hspd1 protein_coding protein_coding MGP_BALBcJ_T0019809.1 MGP_BALBcJ_G0015968.1 mouse_genomes_project 1 52944769 52949205 - MGP_BALBcJ_P0019809 Hspd1 protein_coding protein_coding MGP_BALBcJ_T0000668.1 MGP_BALBcJ_G0000604.1 mouse_genomes_project 1 148376232 148378281 - TEC TEC MGP_BALBcJ_T0100344.1 MGP_BALBcJ_G0038380.1 mouse_genomes_project 1 57626407 57626494 + Snord70 snoRNA snoRNA MGP_BALBcJ_T0022419.1 MGP_BALBcJ_G0016502.1 mouse_genomes_project 1 139138647 139510013 + MGP_BALBcJ_P0022419 Kcnt2 protein_coding protein_coding MGP_BALBcJ_T0022420.1 MGP_BALBcJ_G0016502.1 mouse_genomes_project 1 139138684 139507728 + MGP_BALBcJ_P0022420 Kcnt2 protein_coding protein_coding MGP_BALBcJ_T0022421.1 MGP_BALBcJ_G0016502.1 mouse_genomes_project 1 139138696 139508025 + MGP_BALBcJ_P0022421 Kcnt2 protein_coding protein_coding MGP_BALBcJ_T0022422.1 MGP_BALBcJ_G0016502.1 mouse_genomes_project 1 139339543 139340533 + Kcnt2 protein_coding retained_intron MGP_BALBcJ_T0022423.1 MGP_BALBcJ_G0016502.1 mouse_genomes_project 1 139339708 139422243 + Kcnt2 protein_coding processed_transcript MGP_BALBcJ_T0022424.1 MGP_BALBcJ_G0016502.1 mouse_genomes_project 1 139413075 139472683 + MGP_BALBcJ_P0022424 Kcnt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005628.1 MGP_BALBcJ_G0004738.1 mouse_genomes_project 1 13720641 13725377 + D030040B21Rik lincRNA lincRNA MGP_BALBcJ_T0000620.1 MGP_BALBcJ_G0000558.1 mouse_genomes_project 1 130675782 130677693 + TEC TEC MGP_BALBcJ_T0000348.1 MGP_BALBcJ_G0000289.1 mouse_genomes_project 1 710957 712591 + TEC TEC MGP_BALBcJ_T0011828.1 MGP_BALBcJ_G0009925.1 mouse_genomes_project 1 563078 564004 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022874.1 MGP_BALBcJ_G0016584.1 mouse_genomes_project 1 159230362 159240976 - MGP_BALBcJ_P0022874 Cacybp protein_coding protein_coding MGP_BALBcJ_T0022875.1 MGP_BALBcJ_G0016584.1 mouse_genomes_project 1 159234206 159240896 - MGP_BALBcJ_P0022875 Cacybp protein_coding protein_coding MGP_BALBcJ_T0022876.1 MGP_BALBcJ_G0016584.1 mouse_genomes_project 1 159236180 159240817 - Cacybp protein_coding retained_intron MGP_BALBcJ_T0100330.1 MGP_BALBcJ_G0038366.1 mouse_genomes_project 1 28518915 28519042 - Gm26145 snoRNA snoRNA MGP_BALBcJ_T0000610.1 MGP_BALBcJ_G0000548.1 mouse_genomes_project 1 128094185 128095144 + TEC TEC MGP_BALBcJ_T0023084.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163314022 163447913 + MGP_BALBcJ_P0023084 Nme7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023086.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163317573 163447488 + MGP_BALBcJ_P0023086 Nme7 protein_coding protein_coding MGP_BALBcJ_T0023087.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163317628 163359672 + Nme7 protein_coding processed_transcript MGP_BALBcJ_T0023088.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163317649 163323328 + Nme7 protein_coding retained_intron MGP_BALBcJ_T0023089.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163317974 163447482 + MGP_BALBcJ_P0023089 Nme7 protein_coding protein_coding MGP_BALBcJ_T0023090.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163317998 163344467 + Nme7 protein_coding retained_intron MGP_BALBcJ_T0023091.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163323039 163358418 + MGP_BALBcJ_P0023091 Nme7 protein_coding protein_coding MGP_BALBcJ_T0023092.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163355455 163390741 + Nme7 protein_coding retained_intron MGP_BALBcJ_T0023093.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163383163 163447424 + Nme7 protein_coding processed_transcript MGP_BALBcJ_T0023094.1 MGP_BALBcJ_G0016626.1 mouse_genomes_project 1 163383163 163447480 + Nme7 protein_coding processed_transcript MGP_BALBcJ_T0098734.1 MGP_BALBcJ_G0036788.1 mouse_genomes_project 1 126050828 126050957 + Gm23370 scaRNA scaRNA MGP_BALBcJ_T0017045.1 MGP_BALBcJ_G0015063.1 mouse_genomes_project 1 171654848 171667473 - 4933439K11Rik processed_transcript lincRNA MGP_BALBcJ_T0017046.1 MGP_BALBcJ_G0015063.1 mouse_genomes_project 1 171658362 171667610 - 4933439K11Rik processed_transcript lincRNA MGP_BALBcJ_T0017047.1 MGP_BALBcJ_G0015063.1 mouse_genomes_project 1 171666053 171674901 - 4933439K11Rik processed_transcript antisense MGP_BALBcJ_T0020349.1 MGP_BALBcJ_G0016067.1 mouse_genomes_project 1 70286146 70311548 - MGP_BALBcJ_P0020349 Pecr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020350.1 MGP_BALBcJ_G0016067.1 mouse_genomes_project 1 70286151 70311602 - MGP_BALBcJ_P0020350 Pecr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020351.1 MGP_BALBcJ_G0016067.1 mouse_genomes_project 1 70286151 70311603 - MGP_BALBcJ_P0020351 Pecr protein_coding protein_coding MGP_BALBcJ_T0020352.1 MGP_BALBcJ_G0016067.1 mouse_genomes_project 1 70293975 70311548 - MGP_BALBcJ_P0020352 Pecr protein_coding protein_coding MGP_BALBcJ_T0021342.1 MGP_BALBcJ_G0016268.1 mouse_genomes_project 1 91341444 91373254 + MGP_BALBcJ_P0021342 Gpr35 protein_coding protein_coding MGP_BALBcJ_T0021343.1 MGP_BALBcJ_G0016268.1 mouse_genomes_project 1 91346743 91373577 + MGP_BALBcJ_P0021343 Gpr35 protein_coding protein_coding MGP_BALBcJ_T0021344.1 MGP_BALBcJ_G0016268.1 mouse_genomes_project 1 91363689 91375612 + MGP_BALBcJ_P0021344 Gpr35 protein_coding protein_coding MGP_BALBcJ_T0021345.1 MGP_BALBcJ_G0016268.1 mouse_genomes_project 1 91363689 91376821 + MGP_BALBcJ_P0021345 Gpr35 protein_coding protein_coding MGP_BALBcJ_T0021346.1 MGP_BALBcJ_G0016268.1 mouse_genomes_project 1 91365914 91376432 + MGP_BALBcJ_P0021346 Gpr35 protein_coding protein_coding MGP_BALBcJ_T0021347.1 MGP_BALBcJ_G0016268.1 mouse_genomes_project 1 91369489 91376959 + MGP_BALBcJ_P0021347 Gpr35 protein_coding protein_coding MGP_BALBcJ_T0023639.1 MGP_BALBcJ_G0016771.1 mouse_genomes_project 1 174149379 174240566 - MGP_BALBcJ_P0023639 Grem2 protein_coding protein_coding MGP_BALBcJ_T0100405.1 MGP_BALBcJ_G0038441.1 mouse_genomes_project 1 164452080 164452165 + Gm24637 snoRNA snoRNA MGP_BALBcJ_T0020211.1 MGP_BALBcJ_G0016045.1 mouse_genomes_project 1 63095604 63116308 - MGP_BALBcJ_P0020211 D630023F18Rik protein_coding protein_coding MGP_BALBcJ_T0020212.1 MGP_BALBcJ_G0016045.1 mouse_genomes_project 1 63097632 63116287 - MGP_BALBcJ_P0020212 D630023F18Rik protein_coding protein_coding MGP_BALBcJ_T0020213.1 MGP_BALBcJ_G0016045.1 mouse_genomes_project 1 63099038 63116208 - MGP_BALBcJ_P0020213 D630023F18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009525.1 MGP_BALBcJ_G0007650.1 mouse_genomes_project 1 166335772 166335828 - Gm25911 miRNA miRNA MGP_BALBcJ_T0011216.1 MGP_BALBcJ_G0009341.1 mouse_genomes_project 1 10958721 10959029 + Gm25491 misc_RNA misc_RNA MGP_BALBcJ_T0017003.1 MGP_BALBcJ_G0015052.1 mouse_genomes_project 1 137810468 137813811 + Gm37423 processed_transcript retained_intron MGP_BALBcJ_T0009483.1 MGP_BALBcJ_G0007608.1 mouse_genomes_project 1 80940447 80940500 + Gm22396 miRNA miRNA MGP_BALBcJ_T0012274.1 MGP_BALBcJ_G0010371.1 mouse_genomes_project 1 156583529 156584136 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000517.1 MGP_BALBcJ_G0000455.1 mouse_genomes_project 1 76499941 76501420 - TEC TEC MGP_BALBcJ_T0098810.1 MGP_BALBcJ_G0036863.1 mouse_genomes_project 1 186663892 186667384 - Gm15509 sense_intronic sense_intronic MGP_BALBcJ_T0012121.1 MGP_BALBcJ_G0010218.1 mouse_genomes_project 1 92661783 92662625 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005945.1 MGP_BALBcJ_G0004984.1 mouse_genomes_project 1 163515851 163527485 + Gm26685 lincRNA lincRNA MGP_BALBcJ_T0018789.1 MGP_BALBcJ_G0015769.1 mouse_genomes_project 1 7023384 7063702 - MGP_BALBcJ_P0018789 Ppp1r42 protein_coding protein_coding MGP_BALBcJ_T0018790.1 MGP_BALBcJ_G0015769.1 mouse_genomes_project 1 7023384 7040303 - MGP_BALBcJ_P0018790 Ppp1r42 protein_coding protein_coding MGP_BALBcJ_T0018791.1 MGP_BALBcJ_G0015769.1 mouse_genomes_project 1 7023384 7058169 - MGP_BALBcJ_P0018791 Ppp1r42 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018792.1 MGP_BALBcJ_G0015769.1 mouse_genomes_project 1 7023583 7063696 - MGP_BALBcJ_P0018792 Ppp1r42 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018793.1 MGP_BALBcJ_G0015769.1 mouse_genomes_project 1 7033569 7063696 - MGP_BALBcJ_P0018793 Ppp1r42 protein_coding protein_coding MGP_BALBcJ_T0018794.1 MGP_BALBcJ_G0015769.1 mouse_genomes_project 1 7049655 7063696 - Ppp1r42 protein_coding retained_intron MGP_BALBcJ_T0000785.1 MGP_BALBcJ_G0000719.1 mouse_genomes_project 1 189468030 189471113 - TEC TEC MGP_BALBcJ_T0019775.1 MGP_BALBcJ_G0015964.1 mouse_genomes_project 1 52323152 52409453 - MGP_BALBcJ_P0019775 Pgap1 protein_coding protein_coding MGP_BALBcJ_T0019776.1 MGP_BALBcJ_G0015964.1 mouse_genomes_project 1 52376230 52409455 - Pgap1 protein_coding retained_intron MGP_BALBcJ_T0019777.1 MGP_BALBcJ_G0015964.1 mouse_genomes_project 1 52378093 52381340 - Pgap1 protein_coding retained_intron MGP_BALBcJ_T0019778.1 MGP_BALBcJ_G0015964.1 mouse_genomes_project 1 52406373 52409398 - Pgap1 protein_coding retained_intron MGP_BALBcJ_T0002817.1 MGP_BALBcJ_G0002665.1 mouse_genomes_project 1 73235681 73240787 + Gm28294 antisense antisense MGP_BALBcJ_T0002747.1 MGP_BALBcJ_G0002613.1 mouse_genomes_project 1 16133083 16176586 - Gm15825 antisense antisense MGP_BALBcJ_T0000546.1 MGP_BALBcJ_G0000484.1 mouse_genomes_project 1 85040898 85042409 + TEC TEC MGP_BALBcJ_T0022581.1 MGP_BALBcJ_G0016532.1 mouse_genomes_project 1 151765813 151775035 + MGP_BALBcJ_P0022581 Arpc5 protein_coding unknown_likely_coding MGP_BALBcJ_T0022582.1 MGP_BALBcJ_G0016532.1 mouse_genomes_project 1 151767765 151773662 + Arpc5 protein_coding retained_intron MGP_BALBcJ_T0000706.1 MGP_BALBcJ_G0000642.1 mouse_genomes_project 1 159674257 159676596 - TEC TEC MGP_BALBcJ_T0099068.1 MGP_BALBcJ_G0037104.1 mouse_genomes_project 1 6885986 6886091 - Gm22607 snRNA snRNA MGP_BALBcJ_T0018709.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3239726 3269197 + MGP_BALBcJ_P0018709 Rb1cc1 protein_coding protein_coding MGP_BALBcJ_T0018710.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3239756 3273221 + MGP_BALBcJ_P0018710 Rb1cc1 protein_coding protein_coding MGP_BALBcJ_T0018711.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3248195 3265657 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0018712.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3248378 3309383 + MGP_BALBcJ_P0018712 Rb1cc1 protein_coding protein_coding MGP_BALBcJ_T0018713.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3248540 3268896 + MGP_BALBcJ_P0018713 Rb1cc1 protein_coding protein_coding MGP_BALBcJ_T0018714.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3262955 3284537 + MGP_BALBcJ_P0018714 Rb1cc1 protein_coding protein_coding MGP_BALBcJ_T0018715.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3275819 3283866 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0018716.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3284595 3307494 + MGP_BALBcJ_P0018716 Rb1cc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018717.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3285484 3286767 + Rb1cc1 protein_coding processed_transcript MGP_BALBcJ_T0018718.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3285602 3299472 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0018719.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3294455 3296507 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0018720.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3296555 3298556 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0018721.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3296585 3307493 + MGP_BALBcJ_P0018721 Rb1cc1 protein_coding protein_coding MGP_BALBcJ_T0018722.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3299267 3306427 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0018723.1 MGP_BALBcJ_G0015756.1 mouse_genomes_project 1 3304339 3308579 + Rb1cc1 protein_coding retained_intron MGP_BALBcJ_T0024035.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184882525 184929013 + Eprs protein_coding retained_intron MGP_BALBcJ_T0024036.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184882525 184947464 + MGP_BALBcJ_P0024036 Eprs protein_coding protein_coding MGP_BALBcJ_T0024037.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184882539 184886407 + Eprs protein_coding retained_intron MGP_BALBcJ_T0024038.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184882613 184896378 + Eprs protein_coding retained_intron MGP_BALBcJ_T0024039.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184882665 184901244 + MGP_BALBcJ_P0024039 Eprs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024040.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184884920 184892729 + Eprs protein_coding retained_intron MGP_BALBcJ_T0024041.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184887023 184898290 + MGP_BALBcJ_P0024041 Eprs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024042.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184887030 184893749 + Eprs protein_coding retained_intron MGP_BALBcJ_T0024043.1 MGP_BALBcJ_G0016853.1 mouse_genomes_project 1 184918703 184922359 + Eprs protein_coding retained_intron MGP_BALBcJ_T0100383.1 MGP_BALBcJ_G0038419.1 mouse_genomes_project 1 136580511 136580627 + Gm22727 snoRNA snoRNA MGP_BALBcJ_T0012038.1 MGP_BALBcJ_G0010135.1 mouse_genomes_project 1 58743916 58745259 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099102.1 MGP_BALBcJ_G0037138.1 mouse_genomes_project 1 70281987 70282178 + Gm25939 snRNA snRNA MGP_BALBcJ_T0022412.1 MGP_BALBcJ_G0016500.1 mouse_genomes_project 1 138546497 138613772 - MGP_BALBcJ_P0022412 protein_coding protein_coding MGP_BALBcJ_T0022413.1 MGP_BALBcJ_G0016500.1 mouse_genomes_project 1 138546497 138613847 - MGP_BALBcJ_P0022413 protein_coding protein_coding MGP_BALBcJ_T0022414.1 MGP_BALBcJ_G0016500.1 mouse_genomes_project 1 138546506 138613840 - MGP_BALBcJ_P0022414 protein_coding protein_coding MGP_BALBcJ_T0099136.1 MGP_BALBcJ_G0037172.1 mouse_genomes_project 1 150001423 150001530 - Gm22756 snRNA snRNA MGP_BALBcJ_T0023537.1 MGP_BALBcJ_G0016727.1 mouse_genomes_project 1 171489392 171496877 + MGP_BALBcJ_P0023537 Pigm protein_coding protein_coding MGP_BALBcJ_T0000424.1 MGP_BALBcJ_G0000363.1 mouse_genomes_project 1 29972045 29974515 + TEC TEC MGP_BALBcJ_T0005661.1 MGP_BALBcJ_G0004768.1 mouse_genomes_project 1 34029660 34035607 - Gm33533 lincRNA lincRNA MGP_BALBcJ_T0019592.1 MGP_BALBcJ_G0015929.1 mouse_genomes_project 1 41908678 42131727 + MGP_BALBcJ_P0019592 Gulp1 protein_coding protein_coding MGP_BALBcJ_T0019593.1 MGP_BALBcJ_G0015929.1 mouse_genomes_project 1 41908860 42123781 + MGP_BALBcJ_P0019593 Gulp1 protein_coding protein_coding MGP_BALBcJ_T0019594.1 MGP_BALBcJ_G0015929.1 mouse_genomes_project 1 41908860 42131715 + MGP_BALBcJ_P0019594 Gulp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019595.1 MGP_BALBcJ_G0015929.1 mouse_genomes_project 1 41908894 42123402 + Gulp1 protein_coding processed_transcript MGP_BALBcJ_T0019596.1 MGP_BALBcJ_G0015929.1 mouse_genomes_project 1 41909764 42053542 + MGP_BALBcJ_P0019596 Gulp1 protein_coding protein_coding MGP_BALBcJ_T0019597.1 MGP_BALBcJ_G0015929.1 mouse_genomes_project 1 42040659 42131714 + MGP_BALBcJ_P0019597 Gulp1 protein_coding protein_coding MGP_BALBcJ_T0000595.1 MGP_BALBcJ_G0000533.1 mouse_genomes_project 1 122526931 122529785 - TEC TEC MGP_BALBcJ_T0012017.1 MGP_BALBcJ_G0010114.1 mouse_genomes_project 1 50966151 50966724 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011215.1 MGP_BALBcJ_G0009340.1 mouse_genomes_project 1 7231517 7231757 + Gm26348 misc_RNA misc_RNA MGP_BALBcJ_T0000425.1 MGP_BALBcJ_G0000364.1 mouse_genomes_project 1 30230122 30235128 - TEC TEC MGP_BALBcJ_T0000626.1 MGP_BALBcJ_G0000563.1 mouse_genomes_project 1 132569292 132572496 - TEC TEC MGP_BALBcJ_T0012140.1 MGP_BALBcJ_G0010237.1 mouse_genomes_project 1 102927030 102927506 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011240.1 MGP_BALBcJ_G0009365.1 mouse_genomes_project 1 190778085 190778193 + Gm24748 misc_RNA misc_RNA MGP_BALBcJ_T0020947.1 MGP_BALBcJ_G0016178.1 mouse_genomes_project 1 84166790 84176169 + MGP_BALBcJ_P0020947 2810459M11Rik protein_coding protein_coding MGP_BALBcJ_T0020948.1 MGP_BALBcJ_G0016178.1 mouse_genomes_project 1 84166790 84174066 + MGP_BALBcJ_P0020948 2810459M11Rik protein_coding protein_coding MGP_BALBcJ_T0012172.1 MGP_BALBcJ_G0010269.1 mouse_genomes_project 1 112084891 112085627 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021272.1 MGP_BALBcJ_G0016250.1 mouse_genomes_project 1 90181955 90228242 + MGP_BALBcJ_P0021272 Twist2 protein_coding protein_coding MGP_BALBcJ_T0021273.1 MGP_BALBcJ_G0016250.1 mouse_genomes_project 1 90181964 90184489 + MGP_BALBcJ_P0021273 Twist2 protein_coding protein_coding MGP_BALBcJ_T0102067.1 MGP_BALBcJ_G0039884.1 mouse_genomes_project 1 86422015 86422873 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0023609.1 MGP_BALBcJ_G0016753.1 mouse_genomes_project 1 173077247 173113710 - MGP_BALBcJ_P0023609 Mndal protein_coding protein_coding MGP_BALBcJ_T0023610.1 MGP_BALBcJ_G0016753.1 mouse_genomes_project 1 173077247 173113710 - MGP_BALBcJ_P0023610 Mndal protein_coding protein_coding MGP_BALBcJ_T0023611.1 MGP_BALBcJ_G0016753.1 mouse_genomes_project 1 173077248 173113710 - MGP_BALBcJ_P0023611 Mndal protein_coding protein_coding MGP_BALBcJ_T0022998.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161707745 161777253 - MGP_BALBcJ_P0022998 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0022999.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161707747 161777284 - MGP_BALBcJ_P0022999 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023000.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161708767 161741518 - MGP_BALBcJ_P0023000 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023001.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161708770 161741944 - MGP_BALBcJ_P0023001 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023002.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161709582 161777209 - MGP_BALBcJ_P0023002 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023003.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161710094 161777278 - MGP_BALBcJ_P0023003 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023004.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161720347 161724975 - Prrc2c protein_coding retained_intron MGP_BALBcJ_T0023005.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161747125 161777132 - MGP_BALBcJ_P0023005 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023006.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161749556 161750771 - Prrc2c protein_coding retained_intron MGP_BALBcJ_T0023007.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161756617 161777225 - Prrc2c protein_coding retained_intron MGP_BALBcJ_T0023008.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161757270 161777078 - MGP_BALBcJ_P0023008 Prrc2c protein_coding protein_coding MGP_BALBcJ_T0023009.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161759631 161761598 - Prrc2c protein_coding retained_intron MGP_BALBcJ_T0023010.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161765343 161767447 - Prrc2c protein_coding retained_intron MGP_BALBcJ_T0023011.1 MGP_BALBcJ_G0016605.1 mouse_genomes_project 1 161766982 161777215 - Prrc2c protein_coding processed_transcript MGP_BALBcJ_T0022692.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154265384 154411973 - MGP_BALBcJ_P0022692 Xpr1 protein_coding protein_coding MGP_BALBcJ_T0022693.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154268665 154412051 - MGP_BALBcJ_P0022693 Xpr1 protein_coding protein_coding MGP_BALBcJ_T0022694.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154271866 154302133 - Xpr1 protein_coding retained_intron MGP_BALBcJ_T0022695.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154272351 154412059 - MGP_BALBcJ_P0022695 Xpr1 protein_coding protein_coding MGP_BALBcJ_T0022696.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154279195 154281928 - Xpr1 protein_coding retained_intron MGP_BALBcJ_T0022697.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154315106 154412039 - Xpr1 protein_coding retained_intron MGP_BALBcJ_T0022698.1 MGP_BALBcJ_G0016555.1 mouse_genomes_project 1 154374502 154377573 - Xpr1 protein_coding processed_transcript MGP_BALBcJ_T0020763.1 MGP_BALBcJ_G0016140.1 mouse_genomes_project 1 76711260 76724646 + MGP_BALBcJ_P0020763 Utp14b protein_coding protein_coding MGP_BALBcJ_T0020764.1 MGP_BALBcJ_G0016140.1 mouse_genomes_project 1 76711662 76720800 + MGP_BALBcJ_P0020764 Utp14b protein_coding protein_coding MGP_BALBcJ_T0002840.1 MGP_BALBcJ_G0002687.1 mouse_genomes_project 1 92038315 92039631 + Gm28536 antisense antisense MGP_BALBcJ_T0100348.1 MGP_BALBcJ_G0038384.1 mouse_genomes_project 1 61005494 61005608 + Gm24942 snoRNA snoRNA MGP_BALBcJ_T0000356.1 MGP_BALBcJ_G0000297.1 mouse_genomes_project 1 3904267 3907182 - TEC TEC MGP_BALBcJ_T0005620.1 MGP_BALBcJ_G0004734.1 mouse_genomes_project 1 6686165 6687493 - Gm29520 lincRNA lincRNA MGP_BALBcJ_T0023419.1 MGP_BALBcJ_G0016698.1 mouse_genomes_project 1 170414375 170429921 + MGP_BALBcJ_P0023419 Pfdn2 protein_coding protein_coding MGP_BALBcJ_T0023420.1 MGP_BALBcJ_G0016698.1 mouse_genomes_project 1 170414390 170429074 + MGP_BALBcJ_P0023420 Pfdn2 protein_coding protein_coding MGP_BALBcJ_T0000742.1 MGP_BALBcJ_G0000678.1 mouse_genomes_project 1 176052555 176054371 - TEC TEC MGP_BALBcJ_T0002804.1 MGP_BALBcJ_G0002659.1 mouse_genomes_project 1 67509442 67543847 + Gm29114 antisense antisense MGP_BALBcJ_T0005853.1 MGP_BALBcJ_G0004911.1 mouse_genomes_project 1 119087324 119089975 + 1700012E03Rik lincRNA lincRNA MGP_BALBcJ_T0101822.1 MGP_BALBcJ_G0039754.1 mouse_genomes_project 1 18399981 18412794 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101823.1 MGP_BALBcJ_G0039754.1 mouse_genomes_project 1 18400197 18412627 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101824.1 MGP_BALBcJ_G0039754.1 mouse_genomes_project 1 18404505 18412729 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0002818.1 MGP_BALBcJ_G0002666.1 mouse_genomes_project 1 73256295 73259343 + Gm28902 antisense antisense MGP_BALBcJ_T0021570.1 MGP_BALBcJ_G0016316.1 mouse_genomes_project 1 105439358 105459545 + MGP_BALBcJ_P0021570 Serpinb13 protein_coding protein_coding MGP_BALBcJ_T0021571.1 MGP_BALBcJ_G0016316.1 mouse_genomes_project 1 105439368 105459248 + MGP_BALBcJ_P0021571 Serpinb13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012117.1 MGP_BALBcJ_G0010214.1 mouse_genomes_project 1 90814955 90815367 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005637.1 MGP_BALBcJ_G0004747.1 mouse_genomes_project 1 20426453 20426852 + Gm27028 lincRNA lincRNA MGP_BALBcJ_T0012247.1 MGP_BALBcJ_G0010344.1 mouse_genomes_project 1 147589025 147589815 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019931.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56383845 56448412 - MGP_BALBcJ_P0019931 Fam126b protein_coding protein_coding MGP_BALBcJ_T0019932.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56388060 56448355 - MGP_BALBcJ_P0019932 Fam126b protein_coding protein_coding MGP_BALBcJ_T0019933.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56388782 56427139 - MGP_BALBcJ_P0019933 Fam126b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019934.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56390122 56448280 - MGP_BALBcJ_P0019934 Fam126b protein_coding protein_coding MGP_BALBcJ_T0019935.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56413537 56448364 - MGP_BALBcJ_P0019935 Fam126b protein_coding protein_coding MGP_BALBcJ_T0019936.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56418683 56448353 - Fam126b protein_coding processed_transcript MGP_BALBcJ_T0019937.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56418710 56448366 - Fam126b protein_coding retained_intron MGP_BALBcJ_T0019938.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56423615 56426405 - Fam126b protein_coding retained_intron MGP_BALBcJ_T0019939.1 MGP_BALBcJ_G0015992.1 mouse_genomes_project 1 56426788 56448386 - Fam126b protein_coding retained_intron MGP_BALBcJ_T0019436.1 MGP_BALBcJ_G0015895.1 mouse_genomes_project 1 36689542 36797570 - MGP_BALBcJ_P0019436 Tbc1d8 protein_coding protein_coding MGP_BALBcJ_T0019437.1 MGP_BALBcJ_G0015895.1 mouse_genomes_project 1 36689917 36690484 - MGP_BALBcJ_P0019437 Tbc1d8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019438.1 MGP_BALBcJ_G0015895.1 mouse_genomes_project 1 36690346 36797476 - MGP_BALBcJ_P0019438 Tbc1d8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019439.1 MGP_BALBcJ_G0015895.1 mouse_genomes_project 1 36691366 36797515 - MGP_BALBcJ_P0019439 Tbc1d8 protein_coding protein_coding MGP_BALBcJ_T0019440.1 MGP_BALBcJ_G0015895.1 mouse_genomes_project 1 36709249 36710683 - Tbc1d8 protein_coding retained_intron MGP_BALBcJ_T0002777.1 MGP_BALBcJ_G0002638.1 mouse_genomes_project 1 40474360 40475608 + 8430432A02Rik antisense antisense MGP_BALBcJ_T0000729.1 MGP_BALBcJ_G0000665.1 mouse_genomes_project 1 167349335 167351610 - TEC TEC MGP_BALBcJ_T0018849.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8474786 8996523 + MGP_BALBcJ_P0018849 A830018L16Rik protein_coding protein_coding MGP_BALBcJ_T0018850.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8474786 8665244 + MGP_BALBcJ_P0018850 A830018L16Rik protein_coding protein_coding MGP_BALBcJ_T0018851.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8474793 8578727 + A830018L16Rik protein_coding processed_transcript MGP_BALBcJ_T0018852.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8474793 8597952 + A830018L16Rik protein_coding processed_transcript MGP_BALBcJ_T0018853.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8474793 8957752 + MGP_BALBcJ_P0018853 A830018L16Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018854.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8474950 8665054 + MGP_BALBcJ_P0018854 A830018L16Rik protein_coding protein_coding MGP_BALBcJ_T0018855.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8475190 8996019 + MGP_BALBcJ_P0018855 A830018L16Rik protein_coding protein_coding MGP_BALBcJ_T0018856.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8475190 8996019 + MGP_BALBcJ_P0018856 A830018L16Rik protein_coding protein_coding MGP_BALBcJ_T0018857.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8578688 8663280 + MGP_BALBcJ_P0018857 A830018L16Rik protein_coding protein_coding MGP_BALBcJ_T0018858.1 MGP_BALBcJ_G0015775.1 mouse_genomes_project 1 8642632 8659957 + A830018L16Rik protein_coding processed_transcript MGP_BALBcJ_T0000374.1 MGP_BALBcJ_G0000315.1 mouse_genomes_project 1 10322320 10323016 - TEC TEC MGP_BALBcJ_T0002787.1 MGP_BALBcJ_G0002646.1 mouse_genomes_project 1 55764067 55771377 - Gm17234 antisense antisense MGP_BALBcJ_T0000432.1 MGP_BALBcJ_G0000370.1 mouse_genomes_project 1 31164593 31166961 + TEC TEC MGP_BALBcJ_T0000552.1 MGP_BALBcJ_G0000490.1 mouse_genomes_project 1 87828674 87831058 + TEC TEC MGP_BALBcJ_T0019042.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20982180 21045781 - Smap1 protein_coding processed_transcript MGP_BALBcJ_T0019043.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20982961 21061445 - MGP_BALBcJ_P0019043 Smap1 protein_coding protein_coding MGP_BALBcJ_T0019044.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20982967 21061585 - MGP_BALBcJ_P0019044 Smap1 protein_coding protein_coding MGP_BALBcJ_T0019045.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20983520 20985117 - Smap1 protein_coding processed_transcript MGP_BALBcJ_T0019046.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20985620 21007772 - Smap1 protein_coding processed_transcript MGP_BALBcJ_T0019047.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20985873 21045748 - Smap1 protein_coding processed_transcript MGP_BALBcJ_T0019048.1 MGP_BALBcJ_G0015823.1 mouse_genomes_project 1 20986135 21029568 - Smap1 protein_coding retained_intron MGP_BALBcJ_T0019380.1 MGP_BALBcJ_G0015884.1 mouse_genomes_project 1 35243534 35245790 - Lyg1 protein_coding processed_transcript MGP_BALBcJ_T0019381.1 MGP_BALBcJ_G0015884.1 mouse_genomes_project 1 35243534 35254815 - MGP_BALBcJ_P0019381 Lyg1 protein_coding protein_coding MGP_BALBcJ_T0019382.1 MGP_BALBcJ_G0015884.1 mouse_genomes_project 1 35243536 35254815 - MGP_BALBcJ_P0019382 Lyg1 protein_coding protein_coding MGP_BALBcJ_T0009470.1 MGP_BALBcJ_G0007595.1 mouse_genomes_project 1 62035593 62035657 - Mir6899 miRNA miRNA MGP_BALBcJ_T0000710.1 MGP_BALBcJ_G0000646.1 mouse_genomes_project 1 159938907 159939850 + TEC TEC MGP_BALBcJ_T0000362.1 MGP_BALBcJ_G0000303.1 mouse_genomes_project 1 6320200 6323465 + TEC TEC MGP_BALBcJ_T0021216.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89629831 89654464 + Ube2f protein_coding retained_intron MGP_BALBcJ_T0021217.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89629838 89664738 + MGP_BALBcJ_P0021217 Ube2f protein_coding protein_coding MGP_BALBcJ_T0021218.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89629846 89665023 + MGP_BALBcJ_P0021218 Ube2f protein_coding protein_coding MGP_BALBcJ_T0021219.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89629864 89669341 + MGP_BALBcJ_P0021219 Ube2f protein_coding protein_coding MGP_BALBcJ_T0021220.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89629892 89664771 + MGP_BALBcJ_P0021220 Ube2f protein_coding protein_coding MGP_BALBcJ_T0021221.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89630093 89664925 + MGP_BALBcJ_P0021221 Ube2f protein_coding protein_coding MGP_BALBcJ_T0021222.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89630183 89644573 + MGP_BALBcJ_P0021222 Ube2f protein_coding protein_coding MGP_BALBcJ_T0021223.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89643922 89655442 + Ube2f protein_coding retained_intron MGP_BALBcJ_T0021224.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89653933 89655550 + Ube2f protein_coding retained_intron MGP_BALBcJ_T0021225.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89655095 89664389 + Ube2f protein_coding retained_intron MGP_BALBcJ_T0021226.1 MGP_BALBcJ_G0016240.1 mouse_genomes_project 1 89662649 89664014 + Ube2f protein_coding retained_intron MGP_BALBcJ_T0021675.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118288557 118470943 - MGP_BALBcJ_P0021675 Ptpn4 protein_coding protein_coding MGP_BALBcJ_T0021676.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118294134 118323921 - MGP_BALBcJ_P0021676 Ptpn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021677.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118325939 118470677 - MGP_BALBcJ_P0021677 Ptpn4 protein_coding protein_coding MGP_BALBcJ_T0021678.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118328962 118376028 - MGP_BALBcJ_P0021678 Ptpn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021679.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118340881 118350408 - Ptpn4 protein_coding retained_intron MGP_BALBcJ_T0021680.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118360488 118417309 - MGP_BALBcJ_P0021680 Ptpn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021681.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118377995 118435716 - MGP_BALBcJ_P0021681 Ptpn4 protein_coding protein_coding MGP_BALBcJ_T0021682.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118398933 118470401 - MGP_BALBcJ_P0021682 Ptpn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021683.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118399273 118470401 - MGP_BALBcJ_P0021683 Ptpn4 protein_coding protein_coding MGP_BALBcJ_T0021684.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118406802 118435736 - MGP_BALBcJ_P0021684 Ptpn4 protein_coding protein_coding MGP_BALBcJ_T0021685.1 MGP_BALBcJ_G0016341.1 mouse_genomes_project 1 118406862 118470329 - MGP_BALBcJ_P0021685 Ptpn4 protein_coding protein_coding MGP_BALBcJ_T0005992.1 MGP_BALBcJ_G0005021.1 mouse_genomes_project 1 182252368 182252867 + Gm37218 lincRNA lincRNA MGP_BALBcJ_T0009450.1 MGP_BALBcJ_G0007575.1 mouse_genomes_project 1 31366329 31366402 + Mir6896 miRNA miRNA MGP_BALBcJ_T0002886.1 MGP_BALBcJ_G0002720.1 mouse_genomes_project 1 145295337 145370265 - Gm29514 antisense antisense MGP_BALBcJ_T0002887.1 MGP_BALBcJ_G0002720.1 mouse_genomes_project 1 145302954 145370374 - Gm29514 antisense antisense MGP_BALBcJ_T0102064.1 MGP_BALBcJ_G0039881.1 mouse_genomes_project 1 86387538 86387788 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009491.1 MGP_BALBcJ_G0007616.1 mouse_genomes_project 1 90849342 90849402 - Mir6900 miRNA miRNA MGP_BALBcJ_T0005642.1 MGP_BALBcJ_G0004751.1 mouse_genomes_project 1 22185963 22186615 - Gm29414 lincRNA lincRNA MGP_BALBcJ_T0098425.1 MGP_BALBcJ_G0036479.1 mouse_genomes_project 1 81342441 81342562 - n-R5s214 rRNA rRNA MGP_BALBcJ_T0023604.1 MGP_BALBcJ_G0016749.1 mouse_genomes_project 1 172898565 172905761 + MGP_BALBcJ_P0023604 protein_coding protein_coding MGP_BALBcJ_T0100321.1 MGP_BALBcJ_G0038357.1 mouse_genomes_project 1 12805764 12805896 + Gm25168 snoRNA snoRNA MGP_BALBcJ_T0022601.1 MGP_BALBcJ_G0016536.1 mouse_genomes_project 1 152119673 152185505 - MGP_BALBcJ_P0022601 Lamc2 protein_coding protein_coding MGP_BALBcJ_T0022602.1 MGP_BALBcJ_G0016536.1 mouse_genomes_project 1 152119673 152185105 - MGP_BALBcJ_P0022602 Lamc2 protein_coding protein_coding MGP_BALBcJ_T0022603.1 MGP_BALBcJ_G0016536.1 mouse_genomes_project 1 152121090 152124152 - Lamc2 protein_coding retained_intron MGP_BALBcJ_T0022604.1 MGP_BALBcJ_G0016536.1 mouse_genomes_project 1 152123015 152125920 - MGP_BALBcJ_P0022604 Lamc2 protein_coding protein_coding MGP_BALBcJ_T0022605.1 MGP_BALBcJ_G0016536.1 mouse_genomes_project 1 152148029 152149916 - Lamc2 protein_coding retained_intron MGP_BALBcJ_T0022606.1 MGP_BALBcJ_G0016536.1 mouse_genomes_project 1 152155138 152185505 - Lamc2 protein_coding retained_intron MGP_BALBcJ_T0023998.1 MGP_BALBcJ_G0016844.1 mouse_genomes_project 1 183522804 183524076 - 1700056E22Rik protein_coding antisense MGP_BALBcJ_T0023999.1 MGP_BALBcJ_G0016844.1 mouse_genomes_project 1 183522806 183523773 - MGP_BALBcJ_P0023999 1700056E22Rik protein_coding protein_coding MGP_BALBcJ_T0022146.1 MGP_BALBcJ_G0016445.1 mouse_genomes_project 1 133086864 133089424 + MGP_BALBcJ_P0022146 Myog protein_coding protein_coding MGP_BALBcJ_T0020692.1 MGP_BALBcJ_G0016127.1 mouse_genomes_project 1 73461244 73465954 - MGP_BALBcJ_P0020692 Chpf protein_coding protein_coding MGP_BALBcJ_T0020693.1 MGP_BALBcJ_G0016127.1 mouse_genomes_project 1 73461250 73465990 - MGP_BALBcJ_P0020693 Chpf protein_coding protein_coding MGP_BALBcJ_T0020694.1 MGP_BALBcJ_G0016127.1 mouse_genomes_project 1 73461251 73465422 - Chpf protein_coding retained_intron MGP_BALBcJ_T0020695.1 MGP_BALBcJ_G0016127.1 mouse_genomes_project 1 73461251 73465802 - MGP_BALBcJ_P0020695 Chpf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020696.1 MGP_BALBcJ_G0016127.1 mouse_genomes_project 1 73464185 73465797 - MGP_BALBcJ_P0020696 Chpf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023648.1 MGP_BALBcJ_G0016773.1 mouse_genomes_project 1 174911311 174936803 - MGP_BALBcJ_P0023648 Fh1 protein_coding protein_coding MGP_BALBcJ_T0023649.1 MGP_BALBcJ_G0016773.1 mouse_genomes_project 1 174912313 174915219 - Fh1 protein_coding retained_intron MGP_BALBcJ_T0023650.1 MGP_BALBcJ_G0016773.1 mouse_genomes_project 1 174912315 174917581 - Fh1 protein_coding retained_intron MGP_BALBcJ_T0023651.1 MGP_BALBcJ_G0016773.1 mouse_genomes_project 1 174912321 174920648 - MGP_BALBcJ_P0023651 Fh1 protein_coding protein_coding MGP_BALBcJ_T0023652.1 MGP_BALBcJ_G0016773.1 mouse_genomes_project 1 174925945 174936741 - MGP_BALBcJ_P0023652 Fh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012156.1 MGP_BALBcJ_G0010253.1 mouse_genomes_project 1 107245594 107247463 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012314.1 MGP_BALBcJ_G0010411.1 mouse_genomes_project 1 175943274 175943929 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023116.1 MGP_BALBcJ_G0016634.1 mouse_genomes_project 1 164334174 164465934 - MGP_BALBcJ_P0023116 Dcaf6 protein_coding protein_coding MGP_BALBcJ_T0023117.1 MGP_BALBcJ_G0016634.1 mouse_genomes_project 1 164334846 164358522 - Dcaf6 protein_coding retained_intron MGP_BALBcJ_T0023118.1 MGP_BALBcJ_G0016634.1 mouse_genomes_project 1 164357581 164396945 - MGP_BALBcJ_P0023118 Dcaf6 protein_coding protein_coding MGP_BALBcJ_T0023119.1 MGP_BALBcJ_G0016634.1 mouse_genomes_project 1 164358011 164396960 - MGP_BALBcJ_P0023119 Dcaf6 protein_coding protein_coding MGP_BALBcJ_T0023120.1 MGP_BALBcJ_G0016634.1 mouse_genomes_project 1 164373290 164465944 - Dcaf6 protein_coding processed_transcript MGP_BALBcJ_T0021930.1 MGP_BALBcJ_G0016398.1 mouse_genomes_project 1 130369384 130383309 + MGP_BALBcJ_P0021930 Avpr1b protein_coding protein_coding MGP_BALBcJ_T0021931.1 MGP_BALBcJ_G0016398.1 mouse_genomes_project 1 130369875 130381063 + MGP_BALBcJ_P0021931 Avpr1b protein_coding protein_coding MGP_BALBcJ_T0012329.1 MGP_BALBcJ_G0010426.1 mouse_genomes_project 1 181687759 181688543 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012053.1 MGP_BALBcJ_G0010150.1 mouse_genomes_project 1 61828318 61829070 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099098.1 MGP_BALBcJ_G0037134.1 mouse_genomes_project 1 68595978 68596085 + Gm23422 snRNA snRNA MGP_BALBcJ_T0005842.1 MGP_BALBcJ_G0004902.1 mouse_genomes_project 1 109860997 109925056 - Gm29088 lincRNA lincRNA MGP_BALBcJ_T0005707.1 MGP_BALBcJ_G0004796.1 mouse_genomes_project 1 53790056 53834142 + 9130227L01Rik lincRNA lincRNA MGP_BALBcJ_T0005708.1 MGP_BALBcJ_G0004796.1 mouse_genomes_project 1 53821876 53834372 + 9130227L01Rik lincRNA lincRNA MGP_BALBcJ_T0100335.1 MGP_BALBcJ_G0038371.1 mouse_genomes_project 1 36897923 36898053 - Gm23722 snoRNA snoRNA MGP_BALBcJ_T0020561.1 MGP_BALBcJ_G0016112.1 mouse_genomes_project 1 73155508 73164182 - MGP_BALBcJ_P0020561 Abcb6 protein_coding protein_coding MGP_BALBcJ_T0020562.1 MGP_BALBcJ_G0016112.1 mouse_genomes_project 1 73155510 73164076 - Abcb6 protein_coding retained_intron MGP_BALBcJ_T0020563.1 MGP_BALBcJ_G0016112.1 mouse_genomes_project 1 73155549 73156661 - MGP_BALBcJ_P0020563 Abcb6 protein_coding protein_coding MGP_BALBcJ_T0020564.1 MGP_BALBcJ_G0016112.1 mouse_genomes_project 1 73156511 73164076 - Abcb6 protein_coding retained_intron MGP_BALBcJ_T0020565.1 MGP_BALBcJ_G0016112.1 mouse_genomes_project 1 73159342 73162739 - Abcb6 protein_coding retained_intron MGP_BALBcJ_T0020566.1 MGP_BALBcJ_G0016112.1 mouse_genomes_project 1 73161699 73164166 - Abcb6 protein_coding retained_intron MGP_BALBcJ_T0012266.1 MGP_BALBcJ_G0010363.1 mouse_genomes_project 1 153331244 153331797 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099091.1 MGP_BALBcJ_G0037127.1 mouse_genomes_project 1 61289747 61289851 - Gm23448 snRNA snRNA MGP_BALBcJ_T0005667.1 MGP_BALBcJ_G0004772.1 mouse_genomes_project 1 38521715 38535374 - 4930448I06Rik lincRNA lincRNA MGP_BALBcJ_T0000469.1 MGP_BALBcJ_G0000407.1 mouse_genomes_project 1 53411544 53413140 + TEC TEC MGP_BALBcJ_T0020458.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72585238 72611858 + MGP_BALBcJ_P0020458 Plcd4 protein_coding protein_coding MGP_BALBcJ_T0020459.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72585238 72611858 + MGP_BALBcJ_P0020459 Plcd4 protein_coding protein_coding MGP_BALBcJ_T0020460.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72585238 72611858 + MGP_BALBcJ_P0020460 Plcd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020461.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72585253 72604670 + Plcd4 protein_coding retained_intron MGP_BALBcJ_T0020462.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72585253 72610041 + MGP_BALBcJ_P0020462 Plcd4 protein_coding protein_coding MGP_BALBcJ_T0020463.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72585253 72610041 + MGP_BALBcJ_P0020463 Plcd4 protein_coding protein_coding MGP_BALBcJ_T0020464.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72586710 72588622 + Plcd4 protein_coding retained_intron MGP_BALBcJ_T0020465.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72586714 72610041 + MGP_BALBcJ_P0020465 Plcd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020466.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72586714 72610041 + MGP_BALBcJ_P0020466 Plcd4 protein_coding protein_coding MGP_BALBcJ_T0020467.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72604490 72609365 + Plcd4 protein_coding processed_transcript MGP_BALBcJ_T0020468.1 MGP_BALBcJ_G0016092.1 mouse_genomes_project 1 72608500 72609690 + Plcd4 protein_coding retained_intron MGP_BALBcJ_T0100350.1 MGP_BALBcJ_G0038386.1 mouse_genomes_project 1 61165234 61165269 + Gm26457 snoRNA snoRNA MGP_BALBcJ_T0099078.1 MGP_BALBcJ_G0037114.1 mouse_genomes_project 1 29820196 29820259 - Gm24732 snRNA snRNA MGP_BALBcJ_T0011905.1 MGP_BALBcJ_G0010002.1 mouse_genomes_project 1 19376970 19377417 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019060.1 MGP_BALBcJ_G0015826.1 mouse_genomes_project 1 21325703 21408444 + MGP_BALBcJ_P0019060 Col9a1 protein_coding protein_coding MGP_BALBcJ_T0019061.1 MGP_BALBcJ_G0015826.1 mouse_genomes_project 1 21346921 21408444 + MGP_BALBcJ_P0019061 Col9a1 protein_coding protein_coding MGP_BALBcJ_T0019062.1 MGP_BALBcJ_G0015826.1 mouse_genomes_project 1 21348751 21376648 + Col9a1 protein_coding processed_transcript MGP_BALBcJ_T0019063.1 MGP_BALBcJ_G0015826.1 mouse_genomes_project 1 21385373 21386810 + Col9a1 protein_coding processed_transcript MGP_BALBcJ_T0002919.1 MGP_BALBcJ_G0002745.1 mouse_genomes_project 1 163809970 163821301 - Gm32569 antisense antisense MGP_BALBcJ_T0002920.1 MGP_BALBcJ_G0002745.1 mouse_genomes_project 1 163810096 163905219 - Gm32569 antisense antisense MGP_BALBcJ_T0000763.1 MGP_BALBcJ_G0000698.1 mouse_genomes_project 1 181506261 181509505 - TEC TEC MGP_BALBcJ_T0012166.1 MGP_BALBcJ_G0010263.1 mouse_genomes_project 1 110522817 110527200 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100367.1 MGP_BALBcJ_G0038403.1 mouse_genomes_project 1 101391766 101391900 - Gm22034 snoRNA snoRNA MGP_BALBcJ_T0023425.1 MGP_BALBcJ_G0016701.1 mouse_genomes_project 1 170460085 170481826 + Arhgap30 protein_coding retained_intron MGP_BALBcJ_T0023426.1 MGP_BALBcJ_G0016701.1 mouse_genomes_project 1 170460085 170481768 + Arhgap30 protein_coding retained_intron MGP_BALBcJ_T0023427.1 MGP_BALBcJ_G0016701.1 mouse_genomes_project 1 170460085 170481768 + MGP_BALBcJ_P0023427 Arhgap30 protein_coding protein_coding MGP_BALBcJ_T0023428.1 MGP_BALBcJ_G0016701.1 mouse_genomes_project 1 170460130 170463947 + Arhgap30 protein_coding retained_intron MGP_BALBcJ_T0000460.1 MGP_BALBcJ_G0000398.1 mouse_genomes_project 1 45166772 45167678 + TEC TEC MGP_BALBcJ_T0021599.1 MGP_BALBcJ_G0016326.1 mouse_genomes_project 1 109359252 109453492 - MGP_BALBcJ_P0021599 Cdh19 protein_coding protein_coding MGP_BALBcJ_T0021600.1 MGP_BALBcJ_G0016326.1 mouse_genomes_project 1 109418948 109453715 - Cdh19 protein_coding processed_transcript MGP_BALBcJ_T0024044.1 MGP_BALBcJ_G0016854.1 mouse_genomes_project 1 184974097 184987976 + MGP_BALBcJ_P0024044 Slc30a10 protein_coding protein_coding MGP_BALBcJ_T0022319.1 MGP_BALBcJ_G0016480.1 mouse_genomes_project 1 135019003 135044556 - MGP_BALBcJ_P0022319 Mroh3 protein_coding protein_coding MGP_BALBcJ_T0022320.1 MGP_BALBcJ_G0016480.1 mouse_genomes_project 1 135019181 135028233 - MGP_BALBcJ_P0022320 Mroh3 protein_coding protein_coding MGP_BALBcJ_T0022321.1 MGP_BALBcJ_G0016480.1 mouse_genomes_project 1 135019181 135048835 - MGP_BALBcJ_P0022321 Mroh3 protein_coding unknown_likely_coding MGP_BALBcJ_T0022322.1 MGP_BALBcJ_G0016480.1 mouse_genomes_project 1 135019191 135020460 - Mroh3 protein_coding retained_intron MGP_BALBcJ_T0022323.1 MGP_BALBcJ_G0016480.1 mouse_genomes_project 1 135028305 135037058 - MGP_BALBcJ_P0022323 Mroh3 protein_coding protein_coding MGP_BALBcJ_T0023925.1 MGP_BALBcJ_G0016827.1 mouse_genomes_project 1 181685098 181693012 + MGP_BALBcJ_P0023925 Srp9 protein_coding protein_coding MGP_BALBcJ_T0023926.1 MGP_BALBcJ_G0016827.1 mouse_genomes_project 1 181685111 181693500 + MGP_BALBcJ_P0023926 Srp9 protein_coding protein_coding MGP_BALBcJ_T0023927.1 MGP_BALBcJ_G0016827.1 mouse_genomes_project 1 181685142 181688853 + Srp9 protein_coding retained_intron MGP_BALBcJ_T0023928.1 MGP_BALBcJ_G0016827.1 mouse_genomes_project 1 181691843 181692898 + Srp9 protein_coding retained_intron MGP_BALBcJ_T0002795.1 MGP_BALBcJ_G0002652.1 mouse_genomes_project 1 57468469 57470886 - 1700122D07Rik antisense antisense MGP_BALBcJ_T0021872.1 MGP_BALBcJ_G0016383.1 mouse_genomes_project 1 129498278 129513976 + MGP_BALBcJ_P0021872 AA986860 protein_coding protein_coding MGP_BALBcJ_T0021873.1 MGP_BALBcJ_G0016383.1 mouse_genomes_project 1 129498412 129511817 + AA986860 protein_coding processed_transcript MGP_BALBcJ_T0021874.1 MGP_BALBcJ_G0016383.1 mouse_genomes_project 1 129509625 129513975 + AA986860 protein_coding retained_intron MGP_BALBcJ_T0022607.1 MGP_BALBcJ_G0016537.1 mouse_genomes_project 1 152220722 152336583 - MGP_BALBcJ_P0022607 Lamc1 protein_coding protein_coding MGP_BALBcJ_T0022608.1 MGP_BALBcJ_G0016537.1 mouse_genomes_project 1 152220722 152230944 - MGP_BALBcJ_P0022608 Lamc1 protein_coding protein_coding MGP_BALBcJ_T0022609.1 MGP_BALBcJ_G0016537.1 mouse_genomes_project 1 152230560 152231218 - Lamc1 protein_coding retained_intron MGP_BALBcJ_T0022610.1 MGP_BALBcJ_G0016537.1 mouse_genomes_project 1 152230614 152241092 - MGP_BALBcJ_P0022610 Lamc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022611.1 MGP_BALBcJ_G0016537.1 mouse_genomes_project 1 152250378 152252223 - Lamc1 protein_coding retained_intron MGP_BALBcJ_T0000548.1 MGP_BALBcJ_G0000486.1 mouse_genomes_project 1 85188044 85190972 + TEC TEC MGP_BALBcJ_T0009446.1 MGP_BALBcJ_G0007571.1 mouse_genomes_project 1 26581989 26582089 + Gm22679 miRNA miRNA MGP_BALBcJ_T0018795.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7079154 7092677 - MGP_BALBcJ_P0018795 Cops5 protein_coding protein_coding MGP_BALBcJ_T0018796.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7079396 7089679 - MGP_BALBcJ_P0018796 Cops5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018797.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7081751 7092491 - MGP_BALBcJ_P0018797 Cops5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018798.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7085233 7092699 - MGP_BALBcJ_P0018798 Cops5 protein_coding protein_coding MGP_BALBcJ_T0018799.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7085464 7092488 - Cops5 protein_coding retained_intron MGP_BALBcJ_T0018800.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7087589 7092718 - Cops5 protein_coding retained_intron MGP_BALBcJ_T0018801.1 MGP_BALBcJ_G0015770.1 mouse_genomes_project 1 7091829 7092495 - Cops5 protein_coding retained_intron MGP_BALBcJ_T0002832.1 MGP_BALBcJ_G0002679.1 mouse_genomes_project 1 89685594 89701585 - Gm17090 antisense antisense MGP_BALBcJ_T0021730.1 MGP_BALBcJ_G0016355.1 mouse_genomes_project 1 120204311 120218547 - MGP_BALBcJ_P0021730 Ddx18 protein_coding protein_coding MGP_BALBcJ_T0021731.1 MGP_BALBcJ_G0016355.1 mouse_genomes_project 1 120205622 120209692 - Ddx18 protein_coding retained_intron MGP_BALBcJ_T0021732.1 MGP_BALBcJ_G0016355.1 mouse_genomes_project 1 120207879 120210750 - MGP_BALBcJ_P0021732 Ddx18 protein_coding protein_coding MGP_BALBcJ_T0021733.1 MGP_BALBcJ_G0016355.1 mouse_genomes_project 1 120215136 120218280 - Ddx18 protein_coding processed_transcript MGP_BALBcJ_T0021755.1 MGP_BALBcJ_G0016360.1 mouse_genomes_project 1 124590062 124635000 - MGP_BALBcJ_P0021755 Lypd1 protein_coding protein_coding MGP_BALBcJ_T0021756.1 MGP_BALBcJ_G0016360.1 mouse_genomes_project 1 124594721 124634173 - MGP_BALBcJ_P0021756 Lypd1 protein_coding protein_coding MGP_BALBcJ_T0021757.1 MGP_BALBcJ_G0016360.1 mouse_genomes_project 1 124594755 124635715 - MGP_BALBcJ_P0021757 Lypd1 protein_coding protein_coding MGP_BALBcJ_T0021758.1 MGP_BALBcJ_G0016360.1 mouse_genomes_project 1 124595538 124633702 - MGP_BALBcJ_P0021758 Lypd1 protein_coding protein_coding MGP_BALBcJ_T0021759.1 MGP_BALBcJ_G0016360.1 mouse_genomes_project 1 124595955 124635888 - MGP_BALBcJ_P0021759 Lypd1 protein_coding protein_coding MGP_BALBcJ_T0023633.1 MGP_BALBcJ_G0016770.1 mouse_genomes_project 1 173803356 174139110 + MGP_BALBcJ_P0023633 Fmn2 protein_coding protein_coding MGP_BALBcJ_T0023634.1 MGP_BALBcJ_G0016770.1 mouse_genomes_project 1 173840928 173886233 + Fmn2 protein_coding processed_transcript MGP_BALBcJ_T0023635.1 MGP_BALBcJ_G0016770.1 mouse_genomes_project 1 173913627 173923497 + Fmn2 protein_coding processed_transcript MGP_BALBcJ_T0023636.1 MGP_BALBcJ_G0016770.1 mouse_genomes_project 1 173913628 174004587 + MGP_BALBcJ_P0023636 Fmn2 protein_coding protein_coding MGP_BALBcJ_T0023637.1 MGP_BALBcJ_G0016770.1 mouse_genomes_project 1 173916380 174010447 + Fmn2 protein_coding retained_intron MGP_BALBcJ_T0023638.1 MGP_BALBcJ_G0016770.1 mouse_genomes_project 1 174018473 174137649 + Fmn2 protein_coding processed_transcript MGP_BALBcJ_T0019721.1 MGP_BALBcJ_G0015951.1 mouse_genomes_project 1 50434055 50437804 + Hibch protein_coding retained_intron MGP_BALBcJ_T0019722.1 MGP_BALBcJ_G0015951.1 mouse_genomes_project 1 50434101 50515467 + MGP_BALBcJ_P0019722 Hibch protein_coding protein_coding MGP_BALBcJ_T0019723.1 MGP_BALBcJ_G0015951.1 mouse_genomes_project 1 50434170 50479465 + Hibch protein_coding retained_intron MGP_BALBcJ_T0019724.1 MGP_BALBcJ_G0015951.1 mouse_genomes_project 1 50440883 50455255 + Hibch protein_coding processed_transcript MGP_BALBcJ_T0019725.1 MGP_BALBcJ_G0015951.1 mouse_genomes_project 1 50459877 50489176 + Hibch protein_coding processed_transcript MGP_BALBcJ_T0019726.1 MGP_BALBcJ_G0015951.1 mouse_genomes_project 1 50490488 50501827 + Hibch protein_coding retained_intron MGP_BALBcJ_T0011991.1 MGP_BALBcJ_G0010088.1 mouse_genomes_project 1 43873665 43874323 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006009.1 MGP_BALBcJ_G0005032.1 mouse_genomes_project 1 184248399 184250929 + Gm34342 lincRNA lincRNA MGP_BALBcJ_T0000522.1 MGP_BALBcJ_G0000460.1 mouse_genomes_project 1 78306469 78308152 - TEC TEC MGP_BALBcJ_T0009481.1 MGP_BALBcJ_G0007606.1 mouse_genomes_project 1 75522850 75522966 - Mir6352 miRNA miRNA MGP_BALBcJ_T0002899.1 MGP_BALBcJ_G0002729.1 mouse_genomes_project 1 154819181 154860350 + Gm37571 antisense antisense MGP_BALBcJ_T0002753.1 MGP_BALBcJ_G0002619.1 mouse_genomes_project 1 31851677 31852187 - 1700101I19Rik antisense antisense MGP_BALBcJ_T0002754.1 MGP_BALBcJ_G0002619.1 mouse_genomes_project 1 31851699 31852089 - 1700101I19Rik antisense antisense MGP_BALBcJ_T0023403.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170396993 170410835 + MGP_BALBcJ_P0023403 Dedd protein_coding protein_coding MGP_BALBcJ_T0023404.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170397247 170410829 + MGP_BALBcJ_P0023404 Dedd protein_coding protein_coding MGP_BALBcJ_T0023405.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170397256 170410190 + MGP_BALBcJ_P0023405 Dedd protein_coding protein_coding MGP_BALBcJ_T0023406.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170397414 170408803 + MGP_BALBcJ_P0023406 Dedd protein_coding protein_coding MGP_BALBcJ_T0023407.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170397455 170409458 + MGP_BALBcJ_P0023407 Dedd protein_coding protein_coding MGP_BALBcJ_T0023408.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170397929 170406918 + MGP_BALBcJ_P0023408 Dedd protein_coding protein_coding MGP_BALBcJ_T0023409.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170398206 170406847 + MGP_BALBcJ_P0023409 Dedd protein_coding protein_coding MGP_BALBcJ_T0023410.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170399264 170410124 + MGP_BALBcJ_P0023410 Dedd protein_coding protein_coding MGP_BALBcJ_T0023411.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170405317 170408640 + Dedd protein_coding retained_intron MGP_BALBcJ_T0023412.1 MGP_BALBcJ_G0016696.1 mouse_genomes_project 1 170406491 170408733 + MGP_BALBcJ_P0023412 Dedd protein_coding protein_coding MGP_BALBcJ_T0012116.1 MGP_BALBcJ_G0010213.1 mouse_genomes_project 1 89864257 89866549 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023074.1 MGP_BALBcJ_G0016622.1 mouse_genomes_project 1 163162939 163232372 + MGP_BALBcJ_P0023074 F5 protein_coding protein_coding MGP_BALBcJ_T0006005.1 MGP_BALBcJ_G0005029.1 mouse_genomes_project 1 184026654 184058841 - 1700112H15Rik lincRNA lincRNA MGP_BALBcJ_T0000716.1 MGP_BALBcJ_G0000652.1 mouse_genomes_project 1 161510546 161512811 + TEC TEC MGP_BALBcJ_T0000600.1 MGP_BALBcJ_G0000538.1 mouse_genomes_project 1 125057264 125058279 - TEC TEC MGP_BALBcJ_T0023719.1 MGP_BALBcJ_G0016786.1 mouse_genomes_project 1 177071858 177106026 - MGP_BALBcJ_P0023719 Adss protein_coding protein_coding MGP_BALBcJ_T0023720.1 MGP_BALBcJ_G0016786.1 mouse_genomes_project 1 177072072 177077498 - Adss protein_coding retained_intron MGP_BALBcJ_T0023721.1 MGP_BALBcJ_G0016786.1 mouse_genomes_project 1 177083514 177106016 - Adss protein_coding retained_intron MGP_BALBcJ_T0005833.1 MGP_BALBcJ_G0004896.1 mouse_genomes_project 1 104435723 104446683 - Gm7160 lincRNA lincRNA MGP_BALBcJ_T0005834.1 MGP_BALBcJ_G0004896.1 mouse_genomes_project 1 104445627 104446653 - Gm7160 lincRNA lincRNA MGP_BALBcJ_T0022950.1 MGP_BALBcJ_G0016595.1 mouse_genomes_project 1 160541842 160552473 + MGP_BALBcJ_P0022950 Tnfsf18 protein_coding protein_coding MGP_BALBcJ_T0000411.1 MGP_BALBcJ_G0000350.1 mouse_genomes_project 1 22922711 22926137 - TEC TEC MGP_BALBcJ_T0022158.1 MGP_BALBcJ_G0016448.1 mouse_genomes_project 1 133184385 133189427 + MGP_BALBcJ_P0022158 4933406M09Rik protein_coding protein_coding MGP_BALBcJ_T0000455.1 MGP_BALBcJ_G0000393.1 mouse_genomes_project 1 40944423 40945717 + TEC TEC MGP_BALBcJ_T0099123.1 MGP_BALBcJ_G0037159.1 mouse_genomes_project 1 129846483 129846577 - Gm25549 snRNA snRNA MGP_BALBcJ_T0000774.1 MGP_BALBcJ_G0000708.1 mouse_genomes_project 1 185647665 185647858 - TEC TEC MGP_BALBcJ_T0020761.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76711047 76761209 + MGP_BALBcJ_P0020761 Acsl3 protein_coding protein_coding MGP_BALBcJ_T0020762.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76711105 76760433 + MGP_BALBcJ_P0020762 Acsl3 protein_coding protein_coding MGP_BALBcJ_T0020765.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76724026 76741947 + MGP_BALBcJ_P0020765 Acsl3 protein_coding protein_coding MGP_BALBcJ_T0020766.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76735049 76761213 + MGP_BALBcJ_P0020766 Acsl3 protein_coding protein_coding MGP_BALBcJ_T0020767.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76735323 76746182 + Acsl3 protein_coding retained_intron MGP_BALBcJ_T0020768.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76743928 76750499 + Acsl3 protein_coding retained_intron MGP_BALBcJ_T0020769.1 MGP_BALBcJ_G0016139.1 mouse_genomes_project 1 76750125 76754755 + Acsl3 protein_coding retained_intron MGP_BALBcJ_T0009439.1 MGP_BALBcJ_G0007564.1 mouse_genomes_project 1 9437920 9438041 + Mir6341 miRNA miRNA MGP_BALBcJ_T0023465.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171030145 171066874 + MGP_BALBcJ_P0023465 Slamf6 protein_coding protein_coding MGP_BALBcJ_T0023466.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171030167 171056927 + MGP_BALBcJ_P0023466 Slamf6 protein_coding protein_coding MGP_BALBcJ_T0023467.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171030312 171031309 + Slamf6 protein_coding retained_intron MGP_BALBcJ_T0023468.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171030338 171061100 + MGP_BALBcJ_P0023468 Slamf6 protein_coding protein_coding MGP_BALBcJ_T0023469.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171032120 171047261 + MGP_BALBcJ_P0023469 Slamf6 protein_coding protein_coding MGP_BALBcJ_T0023470.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171044678 171047598 + Slamf6 protein_coding retained_intron MGP_BALBcJ_T0023471.1 MGP_BALBcJ_G0016713.1 mouse_genomes_project 1 171055643 171061895 + Slamf6 protein_coding processed_transcript MGP_BALBcJ_T0005731.1 MGP_BALBcJ_G0004814.1 mouse_genomes_project 1 61093542 61107151 + Gm20342 lincRNA lincRNA MGP_BALBcJ_T0000430.1 MGP_BALBcJ_G0000368.1 mouse_genomes_project 1 30990759 30991100 + TEC TEC MGP_BALBcJ_T0009514.1 MGP_BALBcJ_G0007639.1 mouse_genomes_project 1 150438825 150438883 + Mir7682 miRNA miRNA MGP_BALBcJ_T0012342.1 MGP_BALBcJ_G0010439.1 mouse_genomes_project 1 190578509 190578936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023275.1 MGP_BALBcJ_G0016668.1 mouse_genomes_project 1 169232237 169259269 + MGP_BALBcJ_P0023275 Sh2d1b2 protein_coding protein_coding MGP_BALBcJ_T0023276.1 MGP_BALBcJ_G0016668.1 mouse_genomes_project 1 169232265 169256607 + MGP_BALBcJ_P0023276 Sh2d1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021723.1 MGP_BALBcJ_G0016353.1 mouse_genomes_project 1 120082973 120157078 + MGP_BALBcJ_P0021723 Ccdc93 protein_coding protein_coding MGP_BALBcJ_T0021724.1 MGP_BALBcJ_G0016353.1 mouse_genomes_project 1 120082999 120101929 + Ccdc93 protein_coding retained_intron MGP_BALBcJ_T0021725.1 MGP_BALBcJ_G0016353.1 mouse_genomes_project 1 120083019 120102622 + Ccdc93 protein_coding processed_transcript MGP_BALBcJ_T0021726.1 MGP_BALBcJ_G0016353.1 mouse_genomes_project 1 120083032 120096895 + Ccdc93 protein_coding processed_transcript MGP_BALBcJ_T0021727.1 MGP_BALBcJ_G0016353.1 mouse_genomes_project 1 120083034 120152398 + MGP_BALBcJ_P0021727 Ccdc93 protein_coding protein_coding MGP_BALBcJ_T0021728.1 MGP_BALBcJ_G0016353.1 mouse_genomes_project 1 120142050 120150311 + Ccdc93 protein_coding retained_intron MGP_BALBcJ_T0019696.1 MGP_BALBcJ_G0015947.1 mouse_genomes_project 1 50040202 50090567 - MGP_BALBcJ_P0019696 Nab1 protein_coding protein_coding MGP_BALBcJ_T0019697.1 MGP_BALBcJ_G0015947.1 mouse_genomes_project 1 50040202 50090188 - MGP_BALBcJ_P0019697 Nab1 protein_coding protein_coding MGP_BALBcJ_T0019698.1 MGP_BALBcJ_G0015947.1 mouse_genomes_project 1 50042198 50080605 - MGP_BALBcJ_P0019698 Nab1 protein_coding protein_coding MGP_BALBcJ_T0019699.1 MGP_BALBcJ_G0015947.1 mouse_genomes_project 1 50042221 50052105 - Nab1 protein_coding retained_intron MGP_BALBcJ_T0019700.1 MGP_BALBcJ_G0015947.1 mouse_genomes_project 1 50080178 50090203 - Nab1 protein_coding processed_transcript MGP_BALBcJ_T0011225.1 MGP_BALBcJ_G0009350.1 mouse_genomes_project 1 61164531 61164707 + Gm27390 misc_RNA misc_RNA MGP_BALBcJ_T0000363.1 MGP_BALBcJ_G0000304.1 mouse_genomes_project 1 7021568 7023448 + TEC TEC MGP_BALBcJ_T0021517.1 MGP_BALBcJ_G0016305.1 mouse_genomes_project 1 103737992 103818326 - MGP_BALBcJ_P0021517 Rnf152 protein_coding protein_coding MGP_BALBcJ_T0021518.1 MGP_BALBcJ_G0016305.1 mouse_genomes_project 1 103737995 103818364 - MGP_BALBcJ_P0021518 Rnf152 protein_coding protein_coding MGP_BALBcJ_T0000488.1 MGP_BALBcJ_G0000426.1 mouse_genomes_project 1 60217756 60220274 + TEC TEC MGP_BALBcJ_T0102044.1 MGP_BALBcJ_G0039861.1 mouse_genomes_project 1 15036478 15043216 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0022240.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134199403 134248339 - MGP_BALBcJ_P0022240 Ipo9 protein_coding protein_coding MGP_BALBcJ_T0022241.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134201564 134248298 - MGP_BALBcJ_P0022241 Ipo9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022242.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134201564 134248331 - MGP_BALBcJ_P0022242 Ipo9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022243.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134202212 134205686 - MGP_BALBcJ_P0022243 Ipo9 protein_coding protein_coding MGP_BALBcJ_T0022244.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134202900 134205641 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022245.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134203379 134205792 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022246.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134203484 134204651 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022247.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134205707 134206885 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022248.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134206528 134220462 - Ipo9 protein_coding processed_transcript MGP_BALBcJ_T0022249.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134211251 134220553 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022250.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134219445 134248273 - MGP_BALBcJ_P0022250 Ipo9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022251.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134223114 134224238 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022252.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134223564 134237312 - Ipo9 protein_coding retained_intron MGP_BALBcJ_T0022253.1 MGP_BALBcJ_G0016467.1 mouse_genomes_project 1 134225161 134248259 - MGP_BALBcJ_P0022253 Ipo9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0016966.1 MGP_BALBcJ_G0015041.1 mouse_genomes_project 1 84488854 84497245 + C130036L24Rik processed_transcript retained_intron MGP_BALBcJ_T0016967.1 MGP_BALBcJ_G0015041.1 mouse_genomes_project 1 84488864 84503789 + C130036L24Rik processed_transcript processed_transcript MGP_BALBcJ_T0016968.1 MGP_BALBcJ_G0015041.1 mouse_genomes_project 1 84488868 84492053 + C130036L24Rik processed_transcript retained_intron MGP_BALBcJ_T0019236.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33620867 33654969 - MGP_BALBcJ_P0019236 Kansl3 protein_coding protein_coding MGP_BALBcJ_T0019237.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33620867 33654945 - MGP_BALBcJ_P0019237 Kansl3 protein_coding protein_coding MGP_BALBcJ_T0019238.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33622710 33654959 - MGP_BALBcJ_P0019238 Kansl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019239.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33622710 33653802 - MGP_BALBcJ_P0019239 Kansl3 protein_coding protein_coding MGP_BALBcJ_T0019240.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33640506 33653829 - MGP_BALBcJ_P0019240 Kansl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019241.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33643916 33654943 - MGP_BALBcJ_P0019241 Kansl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019242.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33651415 33653829 - MGP_BALBcJ_P0019242 Kansl3 protein_coding protein_coding MGP_BALBcJ_T0019243.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33651698 33654945 - Kansl3 protein_coding retained_intron MGP_BALBcJ_T0019244.1 MGP_BALBcJ_G0015859.1 mouse_genomes_project 1 33653753 33654890 - MGP_BALBcJ_P0019244 Kansl3 protein_coding protein_coding MGP_BALBcJ_T0009508.1 MGP_BALBcJ_G0007633.1 mouse_genomes_project 1 132520832 132520920 - Mir6903 miRNA miRNA MGP_BALBcJ_T0021572.1 MGP_BALBcJ_G0016317.1 mouse_genomes_project 1 105764968 105771193 - MGP_BALBcJ_P0021572 Serpinb3b protein_coding protein_coding MGP_BALBcJ_T0021575.1 MGP_BALBcJ_G0016317.1 mouse_genomes_project 1 105764989 105771193 - MGP_BALBcJ_P0021575 Serpinb3b protein_coding protein_coding MGP_BALBcJ_T0019407.1 MGP_BALBcJ_G0015888.1 mouse_genomes_project 1 35484444 35934646 - MGP_BALBcJ_P0019407 Aff3 protein_coding protein_coding MGP_BALBcJ_T0019408.1 MGP_BALBcJ_G0015888.1 mouse_genomes_project 1 35484445 35972576 - MGP_BALBcJ_P0019408 Aff3 protein_coding protein_coding MGP_BALBcJ_T0019409.1 MGP_BALBcJ_G0015888.1 mouse_genomes_project 1 35486567 35934884 - MGP_BALBcJ_P0019409 Aff3 protein_coding unknown_likely_coding MGP_BALBcJ_T0019410.1 MGP_BALBcJ_G0015888.1 mouse_genomes_project 1 35488380 35504855 - Aff3 protein_coding processed_transcript MGP_BALBcJ_T0019411.1 MGP_BALBcJ_G0015888.1 mouse_genomes_project 1 35643767 35972576 - Aff3 protein_coding processed_transcript MGP_BALBcJ_T0019412.1 MGP_BALBcJ_G0015888.1 mouse_genomes_project 1 35843132 35972576 - MGP_BALBcJ_P0019412 Aff3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019475.1 MGP_BALBcJ_G0015903.1 mouse_genomes_project 1 37561114 37657094 + MGP_BALBcJ_P0019475 Il1r1 protein_coding protein_coding MGP_BALBcJ_T0019476.1 MGP_BALBcJ_G0015903.1 mouse_genomes_project 1 37607120 37656038 + MGP_BALBcJ_P0019476 Il1r1 protein_coding protein_coding MGP_BALBcJ_T0019477.1 MGP_BALBcJ_G0015903.1 mouse_genomes_project 1 37607191 37617713 + Il1r1 protein_coding processed_transcript MGP_BALBcJ_T0002921.1 MGP_BALBcJ_G0002746.1 mouse_genomes_project 1 164499500 164500877 - Gm38325 antisense antisense MGP_BALBcJ_T0000744.1 MGP_BALBcJ_G0000680.1 mouse_genomes_project 1 176268988 176271660 + TEC TEC MGP_BALBcJ_T0005776.1 MGP_BALBcJ_G0004847.1 mouse_genomes_project 1 76841711 77256532 - lincRNA lincRNA MGP_BALBcJ_T0002755.1 MGP_BALBcJ_G0002620.1 mouse_genomes_project 1 32081211 32083760 - Gm38336 antisense antisense MGP_BALBcJ_T0019083.1 MGP_BALBcJ_G0015830.1 mouse_genomes_project 1 23850898 23861837 - MGP_BALBcJ_P0019083 protein_coding protein_coding MGP_BALBcJ_T0006011.1 MGP_BALBcJ_G0005034.1 mouse_genomes_project 1 184606225 184613786 + Gm37662 lincRNA lincRNA MGP_BALBcJ_T0022863.1 MGP_BALBcJ_G0016581.1 mouse_genomes_project 1 159071057 159074511 + 4930523C07Rik protein_coding retained_intron MGP_BALBcJ_T0022864.1 MGP_BALBcJ_G0016581.1 mouse_genomes_project 1 159071059 159098182 + 4930523C07Rik protein_coding lincRNA MGP_BALBcJ_T0022865.1 MGP_BALBcJ_G0016581.1 mouse_genomes_project 1 159071059 159106888 + 4930523C07Rik protein_coding lincRNA MGP_BALBcJ_T0022866.1 MGP_BALBcJ_G0016581.1 mouse_genomes_project 1 159071080 159099441 + 4930523C07Rik protein_coding lincRNA MGP_BALBcJ_T0022867.1 MGP_BALBcJ_G0016581.1 mouse_genomes_project 1 159071122 159098151 + 4930523C07Rik protein_coding lincRNA MGP_BALBcJ_T0022868.1 MGP_BALBcJ_G0016581.1 mouse_genomes_project 1 159101835 159102135 + MGP_BALBcJ_P0022868 4930523C07Rik protein_coding protein_coding MGP_BALBcJ_T0000617.1 MGP_BALBcJ_G0000555.1 mouse_genomes_project 1 129493444 129495124 - TEC TEC MGP_BALBcJ_T0005914.1 MGP_BALBcJ_G0004961.1 mouse_genomes_project 1 150750455 150756525 - 2810414N06Rik lincRNA lincRNA MGP_BALBcJ_T0098787.1 MGP_BALBcJ_G0036841.1 mouse_genomes_project 1 50293928 50296417 - Gm29670 sense_intronic sense_intronic MGP_BALBcJ_T0019017.1 MGP_BALBcJ_G0015816.1 mouse_genomes_project 1 18473809 18496171 + MGP_BALBcJ_P0019017 protein_coding protein_coding MGP_BALBcJ_T0000388.1 MGP_BALBcJ_G0000329.1 mouse_genomes_project 1 16700772 16703159 + TEC TEC MGP_BALBcJ_T0024211.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191635103 191675297 - MGP_BALBcJ_P0024211 Rcor3 protein_coding protein_coding MGP_BALBcJ_T0024212.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191635114 191675439 - MGP_BALBcJ_P0024212 Rcor3 protein_coding protein_coding MGP_BALBcJ_T0024213.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191635324 191675430 - MGP_BALBcJ_P0024213 Rcor3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024214.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191637133 191652858 - MGP_BALBcJ_P0024214 Rcor3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024215.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191637456 191661070 - MGP_BALBcJ_P0024215 Rcor3 protein_coding protein_coding MGP_BALBcJ_T0024216.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191637937 191675326 - MGP_BALBcJ_P0024216 Rcor3 protein_coding protein_coding MGP_BALBcJ_T0024217.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191642735 191645401 - Rcor3 protein_coding retained_intron MGP_BALBcJ_T0024218.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191664763 191668175 - Rcor3 protein_coding retained_intron MGP_BALBcJ_T0024219.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191664907 191674573 - MGP_BALBcJ_P0024219 Rcor3 protein_coding protein_coding MGP_BALBcJ_T0024220.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191671115 191675434 - Rcor3 protein_coding retained_intron MGP_BALBcJ_T0024221.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191673314 191675409 - Rcor3 protein_coding processed_transcript MGP_BALBcJ_T0024222.1 MGP_BALBcJ_G0016889.1 mouse_genomes_project 1 191673605 191675423 - Rcor3 protein_coding processed_transcript MGP_BALBcJ_T0005828.1 MGP_BALBcJ_G0004892.1 mouse_genomes_project 1 97021142 97034878 + Gm7967 lincRNA lincRNA MGP_BALBcJ_T0005829.1 MGP_BALBcJ_G0004892.1 mouse_genomes_project 1 97021143 97034638 + Gm7967 lincRNA lincRNA MGP_BALBcJ_T0005962.1 MGP_BALBcJ_G0004998.1 mouse_genomes_project 1 166272291 166272990 + Gm2453 lincRNA lincRNA MGP_BALBcJ_T0005963.1 MGP_BALBcJ_G0004998.1 mouse_genomes_project 1 166272707 166277085 + Gm2453 lincRNA lincRNA MGP_BALBcJ_T0012214.1 MGP_BALBcJ_G0010311.1 mouse_genomes_project 1 131061192 131061549 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012333.1 MGP_BALBcJ_G0010430.1 mouse_genomes_project 1 183161530 183161881 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000714.1 MGP_BALBcJ_G0000650.1 mouse_genomes_project 1 160767254 160768373 + TEC TEC MGP_BALBcJ_T0005858.1 MGP_BALBcJ_G0004915.1 mouse_genomes_project 1 119496835 119506237 - Gm29348 lincRNA lincRNA MGP_BALBcJ_T0021513.1 MGP_BALBcJ_G0016303.1 mouse_genomes_project 1 98203528 98907330 + MGP_BALBcJ_P0021513 Cntnap5b protein_coding protein_coding MGP_BALBcJ_T0021514.1 MGP_BALBcJ_G0016303.1 mouse_genomes_project 1 98527103 98908423 + MGP_BALBcJ_P0021514 Cntnap5b protein_coding protein_coding MGP_BALBcJ_T0021515.1 MGP_BALBcJ_G0016303.1 mouse_genomes_project 1 98680611 98795163 + Cntnap5b protein_coding processed_transcript MGP_BALBcJ_T0020233.1 MGP_BALBcJ_G0016049.1 mouse_genomes_project 1 63908116 63909915 + MGP_BALBcJ_P0020233 Crygf protein_coding protein_coding MGP_BALBcJ_T0020234.1 MGP_BALBcJ_G0016049.1 mouse_genomes_project 1 63908134 63909914 + MGP_BALBcJ_P0020234 Crygf protein_coding protein_coding MGP_BALBcJ_T0019992.1 MGP_BALBcJ_G0016002.1 mouse_genomes_project 1 57099073 57175200 - MGP_BALBcJ_P0019992 Als2 protein_coding protein_coding MGP_BALBcJ_T0019993.1 MGP_BALBcJ_G0016002.1 mouse_genomes_project 1 57100230 57175062 - MGP_BALBcJ_P0019993 Als2 protein_coding protein_coding MGP_BALBcJ_T0019994.1 MGP_BALBcJ_G0016002.1 mouse_genomes_project 1 57128546 57175200 - Als2 protein_coding retained_intron MGP_BALBcJ_T0019995.1 MGP_BALBcJ_G0016002.1 mouse_genomes_project 1 57153641 57175195 - MGP_BALBcJ_P0019995 Als2 protein_coding protein_coding MGP_BALBcJ_T0019996.1 MGP_BALBcJ_G0016002.1 mouse_genomes_project 1 57154332 57157112 - Als2 protein_coding retained_intron MGP_BALBcJ_T0102074.1 MGP_BALBcJ_G0039891.1 mouse_genomes_project 1 100882636 100965973 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005884.1 MGP_BALBcJ_G0004937.1 mouse_genomes_project 1 134426506 134511823 - Gm38399 lincRNA lincRNA MGP_BALBcJ_T0002825.1 MGP_BALBcJ_G0002672.1 mouse_genomes_project 1 84053511 84057597 - Gm28884 antisense antisense MGP_BALBcJ_T0005694.1 MGP_BALBcJ_G0004786.1 mouse_genomes_project 1 46787982 46870479 + C230029F24Rik lincRNA lincRNA MGP_BALBcJ_T0005695.1 MGP_BALBcJ_G0004786.1 mouse_genomes_project 1 46787982 46873994 + C230029F24Rik lincRNA lincRNA MGP_BALBcJ_T0000607.1 MGP_BALBcJ_G0000545.1 mouse_genomes_project 1 126849995 126852737 + TEC TEC MGP_BALBcJ_T0002803.1 MGP_BALBcJ_G0002658.1 mouse_genomes_project 1 64290079 64296711 - Gm10558 antisense antisense MGP_BALBcJ_T0021017.1 MGP_BALBcJ_G0016196.1 mouse_genomes_project 1 85331040 85336133 + MGP_BALBcJ_P0021017 Prss56 protein_coding protein_coding MGP_BALBcJ_T0005970.1 MGP_BALBcJ_G0005005.1 mouse_genomes_project 1 174885561 174889678 + Gm36307 lincRNA lincRNA MGP_BALBcJ_T0000727.1 MGP_BALBcJ_G0000663.1 mouse_genomes_project 1 165440451 165441357 - TEC TEC MGP_BALBcJ_T0024140.1 MGP_BALBcJ_G0016872.1 mouse_genomes_project 1 190582931 190589112 - Mfsd7b protein_coding retained_intron MGP_BALBcJ_T0024141.1 MGP_BALBcJ_G0016872.1 mouse_genomes_project 1 190582931 190603395 - MGP_BALBcJ_P0024141 Mfsd7b protein_coding protein_coding MGP_BALBcJ_T0024142.1 MGP_BALBcJ_G0016872.1 mouse_genomes_project 1 190582933 190603204 - MGP_BALBcJ_P0024142 Mfsd7b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024143.1 MGP_BALBcJ_G0016872.1 mouse_genomes_project 1 190582934 190585540 - Mfsd7b protein_coding retained_intron MGP_BALBcJ_T0024144.1 MGP_BALBcJ_G0016872.1 mouse_genomes_project 1 190590180 190592374 - Mfsd7b protein_coding retained_intron MGP_BALBcJ_T0024145.1 MGP_BALBcJ_G0016872.1 mouse_genomes_project 1 190602145 190603361 - MGP_BALBcJ_P0024145 Mfsd7b protein_coding protein_coding MGP_BALBcJ_T0000630.1 MGP_BALBcJ_G0000567.1 mouse_genomes_project 1 133602323 133604414 - TEC TEC MGP_BALBcJ_T0000570.1 MGP_BALBcJ_G0000508.1 mouse_genomes_project 1 103242527 103246331 + TEC TEC MGP_BALBcJ_T0100332.1 MGP_BALBcJ_G0038368.1 mouse_genomes_project 1 36842434 36842650 + Gm24826 snoRNA snoRNA MGP_BALBcJ_T0022814.1 MGP_BALBcJ_G0016574.1 mouse_genomes_project 1 156438057 156468677 + MGP_BALBcJ_P0022814 BC026585 protein_coding protein_coding MGP_BALBcJ_T0022815.1 MGP_BALBcJ_G0016574.1 mouse_genomes_project 1 156438076 156468561 + MGP_BALBcJ_P0022815 BC026585 protein_coding protein_coding MGP_BALBcJ_T0022816.1 MGP_BALBcJ_G0016574.1 mouse_genomes_project 1 156441517 156450688 + MGP_BALBcJ_P0022816 BC026585 protein_coding protein_coding MGP_BALBcJ_T0022817.1 MGP_BALBcJ_G0016574.1 mouse_genomes_project 1 156452269 156472872 + MGP_BALBcJ_P0022817 BC026585 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005814.1 MGP_BALBcJ_G0004880.1 mouse_genomes_project 1 90707768 90713795 + Gm29099 lincRNA lincRNA MGP_BALBcJ_T0000501.1 MGP_BALBcJ_G0000439.1 mouse_genomes_project 1 66578118 66580182 - TEC TEC MGP_BALBcJ_T0005961.1 MGP_BALBcJ_G0004997.1 mouse_genomes_project 1 165983822 165986620 - Gm16701 lincRNA lincRNA MGP_BALBcJ_T0000732.1 MGP_BALBcJ_G0000668.1 mouse_genomes_project 1 170803422 170805137 + TEC TEC MGP_BALBcJ_T0100410.1 MGP_BALBcJ_G0038446.1 mouse_genomes_project 1 186231189 186231324 + Gm26169 snoRNA snoRNA MGP_BALBcJ_T0021312.1 MGP_BALBcJ_G0016262.1 mouse_genomes_project 1 91027065 91031689 - MGP_BALBcJ_P0021312 Otos protein_coding protein_coding MGP_BALBcJ_T0021313.1 MGP_BALBcJ_G0016262.1 mouse_genomes_project 1 91027066 91031102 - Otos protein_coding retained_intron MGP_BALBcJ_T0005711.1 MGP_BALBcJ_G0004798.1 mouse_genomes_project 1 54386694 54388747 + Gm28240 lincRNA lincRNA MGP_BALBcJ_T0000560.1 MGP_BALBcJ_G0000498.1 mouse_genomes_project 1 90401989 90404495 - TEC TEC MGP_BALBcJ_T0020165.1 MGP_BALBcJ_G0016032.1 mouse_genomes_project 1 62022499 62114645 - MGP_BALBcJ_P0020165 Klf7 protein_coding protein_coding MGP_BALBcJ_T0020166.1 MGP_BALBcJ_G0016032.1 mouse_genomes_project 1 62035081 62114636 - MGP_BALBcJ_P0020166 Klf7 protein_coding protein_coding MGP_BALBcJ_T0020167.1 MGP_BALBcJ_G0016032.1 mouse_genomes_project 1 62072248 62115832 - MGP_BALBcJ_P0020167 Klf7 protein_coding protein_coding MGP_BALBcJ_T0099069.1 MGP_BALBcJ_G0037105.1 mouse_genomes_project 1 7064379 7064483 - Gm24674 snRNA snRNA MGP_BALBcJ_T0000623.1 MGP_BALBcJ_G0000561.1 mouse_genomes_project 1 131725371 131727180 - TEC TEC MGP_BALBcJ_T0099087.1 MGP_BALBcJ_G0037123.1 mouse_genomes_project 1 51741727 51741841 - Gm24251 snRNA snRNA MGP_BALBcJ_T0000755.1 MGP_BALBcJ_G0000690.1 mouse_genomes_project 1 179519795 179522334 + TEC TEC MGP_BALBcJ_T0019433.1 MGP_BALBcJ_G0015894.1 mouse_genomes_project 1 36685928 36689417 + MGP_BALBcJ_P0019433 Rpl31 protein_coding protein_coding MGP_BALBcJ_T0019434.1 MGP_BALBcJ_G0015894.1 mouse_genomes_project 1 36686199 36689384 + MGP_BALBcJ_P0019434 Rpl31 protein_coding protein_coding MGP_BALBcJ_T0019435.1 MGP_BALBcJ_G0015894.1 mouse_genomes_project 1 36687900 36689417 + Rpl31 protein_coding retained_intron MGP_BALBcJ_T0000373.1 MGP_BALBcJ_G0000314.1 mouse_genomes_project 1 10265823 10267439 - TEC TEC MGP_BALBcJ_T0000414.1 MGP_BALBcJ_G0000353.1 mouse_genomes_project 1 22971788 22975090 - TEC TEC MGP_BALBcJ_T0011236.1 MGP_BALBcJ_G0009361.1 mouse_genomes_project 1 171801627 171801954 - Gm22383 misc_RNA misc_RNA MGP_BALBcJ_T0002767.1 MGP_BALBcJ_G0002630.1 mouse_genomes_project 1 35693887 35702613 + Gm16152 antisense antisense MGP_BALBcJ_T0002768.1 MGP_BALBcJ_G0002630.1 mouse_genomes_project 1 35697467 35698883 + Gm16152 antisense antisense MGP_BALBcJ_T0021302.1 MGP_BALBcJ_G0016257.1 mouse_genomes_project 1 90968549 90969640 + MGP_BALBcJ_P0021302 Olfr1412 protein_coding protein_coding MGP_BALBcJ_T0019966.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56910935 56918753 + Stradb protein_coding retained_intron MGP_BALBcJ_T0019967.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56910935 56925119 + Stradb protein_coding retained_intron MGP_BALBcJ_T0019968.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56910935 56928765 + MGP_BALBcJ_P0019968 Stradb protein_coding protein_coding MGP_BALBcJ_T0019969.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56910935 56932922 + MGP_BALBcJ_P0019969 Stradb protein_coding protein_coding MGP_BALBcJ_T0019970.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56910935 56932329 + MGP_BALBcJ_P0019970 Stradb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019971.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56910935 56932204 + MGP_BALBcJ_P0019971 Stradb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019972.1 MGP_BALBcJ_G0015998.1 mouse_genomes_project 1 56928302 56931566 + MGP_BALBcJ_P0019972 Stradb protein_coding protein_coding MGP_BALBcJ_T0012198.1 MGP_BALBcJ_G0010295.1 mouse_genomes_project 1 121943472 121946106 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005797.1 MGP_BALBcJ_G0004864.1 mouse_genomes_project 1 87094123 87094970 + Platr5 lincRNA lincRNA MGP_BALBcJ_T0005798.1 MGP_BALBcJ_G0004864.1 mouse_genomes_project 1 87094187 87094943 + Platr5 lincRNA lincRNA MGP_BALBcJ_T0005888.1 MGP_BALBcJ_G0004941.1 mouse_genomes_project 1 135418798 135421340 - Gm33994 lincRNA lincRNA MGP_BALBcJ_T0021000.1 MGP_BALBcJ_G0016191.1 mouse_genomes_project 1 84840583 84888941 + Dis3l2 protein_coding processed_transcript MGP_BALBcJ_T0021001.1 MGP_BALBcJ_G0016191.1 mouse_genomes_project 1 84840594 85201417 + MGP_BALBcJ_P0021001 Dis3l2 protein_coding protein_coding MGP_BALBcJ_T0021002.1 MGP_BALBcJ_G0016191.1 mouse_genomes_project 1 84840603 85028647 + Dis3l2 protein_coding retained_intron MGP_BALBcJ_T0021003.1 MGP_BALBcJ_G0016191.1 mouse_genomes_project 1 84840603 85200517 + MGP_BALBcJ_P0021003 Dis3l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021004.1 MGP_BALBcJ_G0016191.1 mouse_genomes_project 1 84840618 85201414 + MGP_BALBcJ_P0021004 Dis3l2 protein_coding protein_coding MGP_BALBcJ_T0021005.1 MGP_BALBcJ_G0016191.1 mouse_genomes_project 1 85002672 85003407 + Dis3l2 protein_coding retained_intron MGP_BALBcJ_T0100352.1 MGP_BALBcJ_G0038388.1 mouse_genomes_project 1 64273711 64273848 + Gm24729 snoRNA snoRNA MGP_BALBcJ_T0002835.1 MGP_BALBcJ_G0002682.1 mouse_genomes_project 1 91203911 91221343 - Gm29481 antisense antisense MGP_BALBcJ_T0000619.1 MGP_BALBcJ_G0000557.1 mouse_genomes_project 1 130117136 130118518 - TEC TEC MGP_BALBcJ_T0021848.1 MGP_BALBcJ_G0016376.1 mouse_genomes_project 1 129112692 129188040 - MGP_BALBcJ_P0021848 protein_coding protein_coding MGP_BALBcJ_T0021851.1 MGP_BALBcJ_G0016376.1 mouse_genomes_project 1 129152070 129187771 - protein_coding processed_transcript MGP_BALBcJ_T0102049.1 MGP_BALBcJ_G0039866.1 mouse_genomes_project 1 18427297 18435442 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012219.1 MGP_BALBcJ_G0010316.1 mouse_genomes_project 1 135346336 135346708 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021128.1 MGP_BALBcJ_G0016215.1 mouse_genomes_project 1 86329670 86472410 + MGP_BALBcJ_P0021128 protein_coding protein_coding MGP_BALBcJ_T0021129.1 MGP_BALBcJ_G0016215.1 mouse_genomes_project 1 86334976 86472418 + MGP_BALBcJ_P0021129 protein_coding protein_coding MGP_BALBcJ_T0020029.1 MGP_BALBcJ_G0016008.1 mouse_genomes_project 1 57700381 57818054 + MGP_BALBcJ_P0020029 Bmpr2 protein_coding protein_coding MGP_BALBcJ_T0020030.1 MGP_BALBcJ_G0016008.1 mouse_genomes_project 1 57789692 57791378 + Bmpr2 protein_coding retained_intron MGP_BALBcJ_T0020031.1 MGP_BALBcJ_G0016008.1 mouse_genomes_project 1 57790504 57795230 + Bmpr2 protein_coding retained_intron MGP_BALBcJ_T0011919.1 MGP_BALBcJ_G0010016.1 mouse_genomes_project 1 25191576 25193449 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019881.1 MGP_BALBcJ_G0015984.1 mouse_genomes_project 1 55967207 55969090 + Aox3 protein_coding retained_intron MGP_BALBcJ_T0019882.1 MGP_BALBcJ_G0015984.1 mouse_genomes_project 1 55967213 56054684 + MGP_BALBcJ_P0019882 Aox3 protein_coding protein_coding MGP_BALBcJ_T0019883.1 MGP_BALBcJ_G0015984.1 mouse_genomes_project 1 55967215 55976469 + Aox3 protein_coding retained_intron MGP_BALBcJ_T0019884.1 MGP_BALBcJ_G0015984.1 mouse_genomes_project 1 55967263 55993818 + MGP_BALBcJ_P0019884 Aox3 protein_coding protein_coding MGP_BALBcJ_T0019885.1 MGP_BALBcJ_G0015984.1 mouse_genomes_project 1 56023885 56026510 + Aox3 protein_coding retained_intron MGP_BALBcJ_T0020187.1 MGP_BALBcJ_G0016036.1 mouse_genomes_project 1 62721434 62728628 - MGP_BALBcJ_P0020187 Fzd5 protein_coding protein_coding MGP_BALBcJ_T0020188.1 MGP_BALBcJ_G0016036.1 mouse_genomes_project 1 62725345 62728626 - MGP_BALBcJ_P0020188 Fzd5 protein_coding protein_coding MGP_BALBcJ_T0005799.1 MGP_BALBcJ_G0004865.1 mouse_genomes_project 1 87205521 87213039 - Gm29337 lincRNA lincRNA MGP_BALBcJ_T0011836.1 MGP_BALBcJ_G0009933.1 mouse_genomes_project 1 1813865 1814934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000786.1 MGP_BALBcJ_G0000720.1 mouse_genomes_project 1 190830706 190832552 + TEC TEC MGP_BALBcJ_T0018757.1 MGP_BALBcJ_G0015762.1 mouse_genomes_project 1 6593990 6625165 + MGP_BALBcJ_P0018757 Adhfe1 protein_coding protein_coding MGP_BALBcJ_T0018758.1 MGP_BALBcJ_G0015762.1 mouse_genomes_project 1 6594097 6624096 + MGP_BALBcJ_P0018758 Adhfe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018759.1 MGP_BALBcJ_G0015762.1 mouse_genomes_project 1 6594134 6599730 + MGP_BALBcJ_P0018759 Adhfe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018760.1 MGP_BALBcJ_G0015762.1 mouse_genomes_project 1 6594149 6601611 + MGP_BALBcJ_P0018760 Adhfe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018761.1 MGP_BALBcJ_G0015762.1 mouse_genomes_project 1 6594161 6627869 + MGP_BALBcJ_P0018761 Adhfe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012132.1 MGP_BALBcJ_G0010229.1 mouse_genomes_project 1 99071135 99071802 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005973.1 MGP_BALBcJ_G0005008.1 mouse_genomes_project 1 176776640 176785530 + Gm37306 lincRNA lincRNA MGP_BALBcJ_T0012179.1 MGP_BALBcJ_G0010276.1 mouse_genomes_project 1 117277296 117277610 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012146.1 MGP_BALBcJ_G0010243.1 mouse_genomes_project 1 104412593 104413131 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012080.1 MGP_BALBcJ_G0010177.1 mouse_genomes_project 1 73561068 73561560 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012158.1 MGP_BALBcJ_G0010255.1 mouse_genomes_project 1 108080786 108080973 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000670.1 MGP_BALBcJ_G0000606.1 mouse_genomes_project 1 149259080 149261487 + TEC TEC MGP_BALBcJ_T0011995.1 MGP_BALBcJ_G0010092.1 mouse_genomes_project 1 45867003 45867989 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100409.1 MGP_BALBcJ_G0038445.1 mouse_genomes_project 1 184754968 184755100 + Snora36b snoRNA snoRNA MGP_BALBcJ_T0012111.1 MGP_BALBcJ_G0010208.1 mouse_genomes_project 1 87386729 87386972 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011852.1 MGP_BALBcJ_G0009949.1 mouse_genomes_project 1 4467841 4472682 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011901.1 MGP_BALBcJ_G0009998.1 mouse_genomes_project 1 18519225 18519421 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009526.1 MGP_BALBcJ_G0007651.1 mouse_genomes_project 1 167495518 167495638 + Mir6348 miRNA miRNA MGP_BALBcJ_T0000673.1 MGP_BALBcJ_G0000609.1 mouse_genomes_project 1 150493812 150496841 - TEC TEC MGP_BALBcJ_T0020774.1 MGP_BALBcJ_G0016143.1 mouse_genomes_project 1 77627400 77708619 - MGP_BALBcJ_P0020774 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020775.1 MGP_BALBcJ_G0016143.1 mouse_genomes_project 1 77627741 77708622 - MGP_BALBcJ_P0020775 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012138.1 MGP_BALBcJ_G0010235.1 mouse_genomes_project 1 100891932 100892199 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012043.1 MGP_BALBcJ_G0010140.1 mouse_genomes_project 1 59166690 59167396 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002876.1 MGP_BALBcJ_G0002710.1 mouse_genomes_project 1 133637465 133649743 + Gm28892 antisense antisense MGP_BALBcJ_T0021664.1 MGP_BALBcJ_G0016339.1 mouse_genomes_project 1 118161516 118164340 + MGP_BALBcJ_P0021664 Tmem185b protein_coding protein_coding MGP_BALBcJ_T0021665.1 MGP_BALBcJ_G0016339.1 mouse_genomes_project 1 118161529 118162586 + Tmem185b protein_coding processed_transcript MGP_BALBcJ_T0009442.1 MGP_BALBcJ_G0007567.1 mouse_genomes_project 1 17767101 17767174 + Mir206 miRNA miRNA MGP_BALBcJ_T0023930.1 MGP_BALBcJ_G0016829.1 mouse_genomes_project 1 181830798 181837828 - MGP_BALBcJ_P0023930 Degs1 protein_coding protein_coding MGP_BALBcJ_T0023931.1 MGP_BALBcJ_G0016829.1 mouse_genomes_project 1 181833520 181837828 - Degs1 protein_coding retained_intron MGP_BALBcJ_T0023932.1 MGP_BALBcJ_G0016829.1 mouse_genomes_project 1 181834027 181837248 - MGP_BALBcJ_P0023932 Degs1 protein_coding protein_coding MGP_BALBcJ_T0099100.1 MGP_BALBcJ_G0037136.1 mouse_genomes_project 1 70263157 70263348 + Gm23472 snRNA snRNA MGP_BALBcJ_T0021686.1 MGP_BALBcJ_G0016342.1 mouse_genomes_project 1 118545384 118550702 - MGP_BALBcJ_P0021686 Tmem177 protein_coding protein_coding MGP_BALBcJ_T0017010.1 MGP_BALBcJ_G0015056.1 mouse_genomes_project 1 158644090 158717484 + Gm10530 processed_transcript sense_intronic MGP_BALBcJ_T0017011.1 MGP_BALBcJ_G0015056.1 mouse_genomes_project 1 158714268 158717484 + Gm10530 processed_transcript lincRNA MGP_BALBcJ_T0011872.1 MGP_BALBcJ_G0009969.1 mouse_genomes_project 1 8670721 8670983 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009486.1 MGP_BALBcJ_G0007611.1 mouse_genomes_project 1 83868579 83868706 + Mir8096 miRNA miRNA MGP_BALBcJ_T0020845.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940484 81003627 + MGP_BALBcJ_P0020845 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020846.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940498 80998826 + MGP_BALBcJ_P0020846 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020847.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940670 80998826 + MGP_BALBcJ_P0020847 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020848.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940672 80998724 + MGP_BALBcJ_P0020848 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020849.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940675 80997966 + MGP_BALBcJ_P0020849 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020850.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940675 80998120 + MGP_BALBcJ_P0020850 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020851.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80940735 80997567 + MGP_BALBcJ_P0020851 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0020852.1 MGP_BALBcJ_G0016158.1 mouse_genomes_project 1 80941074 80982353 + MGP_BALBcJ_P0020852 Agfg1 protein_coding protein_coding MGP_BALBcJ_T0012060.1 MGP_BALBcJ_G0010157.1 mouse_genomes_project 1 63511745 63512150 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012190.1 MGP_BALBcJ_G0010287.1 mouse_genomes_project 1 120157746 120157963 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023036.1 MGP_BALBcJ_G0016611.1 mouse_genomes_project 1 162039398 162100359 - MGP_BALBcJ_P0023036 Mroh9 protein_coding protein_coding MGP_BALBcJ_T0022183.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133358748 133434718 + MGP_BALBcJ_P0022183 Kdm5b protein_coding protein_coding MGP_BALBcJ_T0022184.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133358759 133432323 + MGP_BALBcJ_P0022184 Kdm5b protein_coding unknown_likely_coding MGP_BALBcJ_T0022185.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133358769 133430953 + MGP_BALBcJ_P0022185 Kdm5b protein_coding protein_coding MGP_BALBcJ_T0022186.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133358784 133406222 + Kdm5b protein_coding retained_intron MGP_BALBcJ_T0022187.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133387109 133389819 + Kdm5b protein_coding retained_intron MGP_BALBcJ_T0022188.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133421310 133424532 + Kdm5b protein_coding retained_intron MGP_BALBcJ_T0022189.1 MGP_BALBcJ_G0016454.1 mouse_genomes_project 1 133422230 133426632 + Kdm5b protein_coding retained_intron MGP_BALBcJ_T0023722.1 MGP_BALBcJ_G0016787.1 mouse_genomes_project 1 177354584 177607420 + protein_coding processed_transcript MGP_BALBcJ_T0019812.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993067 53016026 + MGP_BALBcJ_P0019812 Mob4 protein_coding protein_coding MGP_BALBcJ_T0019813.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993067 53017397 + MGP_BALBcJ_P0019813 Mob4 protein_coding protein_coding MGP_BALBcJ_T0019814.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993096 53017396 + Mob4 protein_coding retained_intron MGP_BALBcJ_T0019815.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993118 53015087 + MGP_BALBcJ_P0019815 Mob4 protein_coding protein_coding MGP_BALBcJ_T0019816.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993123 53015447 + MGP_BALBcJ_P0019816 Mob4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019817.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993156 53014871 + MGP_BALBcJ_P0019817 Mob4 protein_coding protein_coding MGP_BALBcJ_T0019818.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 52993162 53007286 + Mob4 protein_coding retained_intron MGP_BALBcJ_T0019819.1 MGP_BALBcJ_G0015970.1 mouse_genomes_project 1 53009342 53010230 + Mob4 protein_coding retained_intron MGP_BALBcJ_T0012246.1 MGP_BALBcJ_G0010343.1 mouse_genomes_project 1 147444540 147444843 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005744.1 MGP_BALBcJ_G0004826.1 mouse_genomes_project 1 69910860 69915383 + Gm8883 lincRNA lincRNA MGP_BALBcJ_T0005745.1 MGP_BALBcJ_G0004826.1 mouse_genomes_project 1 69910865 69914914 + Gm8883 lincRNA lincRNA MGP_BALBcJ_T0005746.1 MGP_BALBcJ_G0004826.1 mouse_genomes_project 1 69911150 69912618 + Gm8883 lincRNA lincRNA MGP_BALBcJ_T0005747.1 MGP_BALBcJ_G0004826.1 mouse_genomes_project 1 69911251 69914766 + Gm8883 lincRNA lincRNA MGP_BALBcJ_T0000707.1 MGP_BALBcJ_G0000643.1 mouse_genomes_project 1 159755247 159755674 - TEC TEC MGP_BALBcJ_T0011998.1 MGP_BALBcJ_G0010095.1 mouse_genomes_project 1 46311882 46312813 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012062.1 MGP_BALBcJ_G0010159.1 mouse_genomes_project 1 64012494 64013237 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000556.1 MGP_BALBcJ_G0000494.1 mouse_genomes_project 1 89214344 89216203 - TEC TEC MGP_BALBcJ_T0012171.1 MGP_BALBcJ_G0010268.1 mouse_genomes_project 1 112067449 112067985 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012082.1 MGP_BALBcJ_G0010179.1 mouse_genomes_project 1 73636329 73637610 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023981.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182857230 182877265 - MGP_BALBcJ_P0023981 protein_coding protein_coding MGP_BALBcJ_T0023982.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182857327 182877265 - MGP_BALBcJ_P0023982 protein_coding unknown_likely_coding MGP_BALBcJ_T0023983.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182857332 182865191 - MGP_BALBcJ_P0023983 protein_coding protein_coding MGP_BALBcJ_T0023984.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182866173 182870072 - MGP_BALBcJ_P0023984 protein_coding protein_coding MGP_BALBcJ_T0023985.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182875700 182883077 - protein_coding retained_intron MGP_BALBcJ_T0023986.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182876196 182883055 - MGP_BALBcJ_P0023986 protein_coding protein_coding MGP_BALBcJ_T0023987.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182882587 182901133 - MGP_BALBcJ_P0023987 protein_coding unknown_likely_coding MGP_BALBcJ_T0023988.1 MGP_BALBcJ_G0016840.1 mouse_genomes_project 1 182890434 182901157 - MGP_BALBcJ_P0023988 protein_coding protein_coding MGP_BALBcJ_T0000497.1 MGP_BALBcJ_G0000435.1 mouse_genomes_project 1 64779093 64781272 + TEC TEC MGP_BALBcJ_T0020481.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72637431 72645448 - MGP_BALBcJ_P0020481 Rnf25 protein_coding protein_coding MGP_BALBcJ_T0020482.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72637431 72645423 - MGP_BALBcJ_P0020482 Rnf25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020483.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72637436 72645428 - MGP_BALBcJ_P0020483 Rnf25 protein_coding protein_coding MGP_BALBcJ_T0020484.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72637905 72638485 - Rnf25 protein_coding retained_intron MGP_BALBcJ_T0020485.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72638892 72644615 - MGP_BALBcJ_P0020485 Rnf25 protein_coding protein_coding MGP_BALBcJ_T0020486.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72639568 72644650 - MGP_BALBcJ_P0020486 Rnf25 protein_coding protein_coding MGP_BALBcJ_T0020487.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72642413 72645396 - MGP_BALBcJ_P0020487 Rnf25 protein_coding protein_coding MGP_BALBcJ_T0020488.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72642600 72645445 - Rnf25 protein_coding retained_intron MGP_BALBcJ_T0020489.1 MGP_BALBcJ_G0016095.1 mouse_genomes_project 1 72642783 72645416 - MGP_BALBcJ_P0020489 Rnf25 protein_coding protein_coding MGP_BALBcJ_T0009440.1 MGP_BALBcJ_G0007565.1 mouse_genomes_project 1 10294395 10294477 + Gm27881 miRNA miRNA MGP_BALBcJ_T0000801.1 MGP_BALBcJ_G0000734.1 mouse_genomes_project 1 194595088 194597787 + TEC TEC MGP_BALBcJ_T0012334.1 MGP_BALBcJ_G0010431.1 mouse_genomes_project 1 183405071 183405218 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002780.1 MGP_BALBcJ_G0002640.1 mouse_genomes_project 1 42077224 42082496 - 4930521E06Rik antisense antisense MGP_BALBcJ_T0021243.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89754297 89778837 - MGP_BALBcJ_P0021243 Ilkap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021244.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89754301 89764773 - MGP_BALBcJ_P0021244 Ilkap protein_coding protein_coding MGP_BALBcJ_T0021245.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89756267 89778920 - MGP_BALBcJ_P0021245 Ilkap protein_coding protein_coding MGP_BALBcJ_T0021246.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89756268 89778892 - Ilkap protein_coding retained_intron MGP_BALBcJ_T0021247.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89756395 89764720 - MGP_BALBcJ_P0021247 Ilkap protein_coding protein_coding MGP_BALBcJ_T0021248.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89756447 89759354 - Ilkap protein_coding retained_intron MGP_BALBcJ_T0021249.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89756490 89778930 - MGP_BALBcJ_P0021249 Ilkap protein_coding protein_coding MGP_BALBcJ_T0021250.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89756491 89778938 - MGP_BALBcJ_P0021250 Ilkap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021251.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89761185 89778952 - Ilkap protein_coding processed_transcript MGP_BALBcJ_T0021252.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89764771 89778922 - MGP_BALBcJ_P0021252 Ilkap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021253.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89765401 89768951 - Ilkap protein_coding retained_intron MGP_BALBcJ_T0021254.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89765490 89778915 - MGP_BALBcJ_P0021254 Ilkap protein_coding protein_coding MGP_BALBcJ_T0021255.1 MGP_BALBcJ_G0016245.1 mouse_genomes_project 1 89770380 89778931 - Ilkap protein_coding retained_intron MGP_BALBcJ_T0020677.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422293 73429593 + MGP_BALBcJ_P0020677 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020678.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422306 73429592 + MGP_BALBcJ_P0020678 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020679.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422324 73425237 + MGP_BALBcJ_P0020679 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020680.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422330 73426931 + MGP_BALBcJ_P0020680 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020681.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422331 73427934 + MGP_BALBcJ_P0020681 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020682.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422345 73428028 + MGP_BALBcJ_P0020682 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020683.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422347 73425818 + MGP_BALBcJ_P0020683 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020684.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422450 73427943 + MGP_BALBcJ_P0020684 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020685.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73422476 73424692 + MGP_BALBcJ_P0020685 Gmppa protein_coding protein_coding MGP_BALBcJ_T0020686.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73423305 73428447 + MGP_BALBcJ_P0020686 Gmppa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020687.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73428038 73429351 + Gmppa protein_coding retained_intron MGP_BALBcJ_T0020688.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73428584 73429592 + Gmppa protein_coding retained_intron MGP_BALBcJ_T0020689.1 MGP_BALBcJ_G0016125.1 mouse_genomes_project 1 73428642 73429598 + Gmppa protein_coding retained_intron MGP_BALBcJ_T0020961.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276667 84368338 + Armc9 protein_coding retained_intron MGP_BALBcJ_T0020962.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276671 84335463 + Armc9 protein_coding retained_intron MGP_BALBcJ_T0020963.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276671 84381839 + Armc9 protein_coding retained_intron MGP_BALBcJ_T0020964.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276673 84292209 + Armc9 protein_coding retained_intron MGP_BALBcJ_T0020965.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276685 84301656 + Armc9 protein_coding processed_transcript MGP_BALBcJ_T0020966.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276685 84398527 + MGP_BALBcJ_P0020966 Armc9 protein_coding protein_coding MGP_BALBcJ_T0020967.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276686 84286715 + MGP_BALBcJ_P0020967 Armc9 protein_coding protein_coding MGP_BALBcJ_T0020968.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276697 84400128 + MGP_BALBcJ_P0020968 Armc9 protein_coding protein_coding MGP_BALBcJ_T0020969.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276702 84374501 + MGP_BALBcJ_P0020969 Armc9 protein_coding protein_coding MGP_BALBcJ_T0020970.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84276706 84299507 + Armc9 protein_coding retained_intron MGP_BALBcJ_T0020971.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84318195 84374404 + MGP_BALBcJ_P0020971 Armc9 protein_coding protein_coding MGP_BALBcJ_T0020972.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84324301 84374501 + MGP_BALBcJ_P0020972 Armc9 protein_coding protein_coding MGP_BALBcJ_T0020973.1 MGP_BALBcJ_G0016182.1 mouse_genomes_project 1 84366577 84391086 + MGP_BALBcJ_P0020973 Armc9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099090.1 MGP_BALBcJ_G0037126.1 mouse_genomes_project 1 59441400 59441503 + Gm25839 snRNA snRNA MGP_BALBcJ_T0100372.1 MGP_BALBcJ_G0038408.1 mouse_genomes_project 1 110959944 110960080 + Gm22331 snoRNA snoRNA MGP_BALBcJ_T0018802.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7092536 7093892 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018803.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7092555 7102083 + MGP_BALBcJ_P0018803 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018804.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7092766 7201753 + MGP_BALBcJ_P0018804 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018805.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7092775 7117144 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018806.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7092798 7114421 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018807.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7092811 7122499 + MGP_BALBcJ_P0018807 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018808.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094316 7114245 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018809.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094322 7123907 + MGP_BALBcJ_P0018809 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018810.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094322 7124264 + MGP_BALBcJ_P0018810 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018811.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094326 7114231 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018812.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094334 7122483 + MGP_BALBcJ_P0018812 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018813.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094372 7115364 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018814.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7094704 7114196 + MGP_BALBcJ_P0018814 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018815.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7101041 7201130 + MGP_BALBcJ_P0018815 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018816.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7112296 7121956 + MGP_BALBcJ_P0018816 Cspp1 protein_coding protein_coding MGP_BALBcJ_T0018817.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7127110 7132119 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018818.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7130309 7144541 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018819.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7130787 7140774 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018820.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7130840 7148979 + MGP_BALBcJ_P0018820 Cspp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018821.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7146470 7149041 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018822.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7155461 7167785 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018823.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7163459 7167774 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018824.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7172372 7197027 + MGP_BALBcJ_P0018824 Cspp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018825.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7174919 7176206 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018826.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7188281 7192872 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018827.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7192812 7196315 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0018828.1 MGP_BALBcJ_G0015771.1 mouse_genomes_project 1 7196823 7201307 + Cspp1 protein_coding retained_intron MGP_BALBcJ_T0012319.1 MGP_BALBcJ_G0010416.1 mouse_genomes_project 1 177756722 177757625 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021448.1 MGP_BALBcJ_G0016287.1 mouse_genomes_project 1 92216340 92234733 + MGP_BALBcJ_P0021448 Ing5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021449.1 MGP_BALBcJ_G0016287.1 mouse_genomes_project 1 92216360 92234738 + MGP_BALBcJ_P0021449 Ing5 protein_coding protein_coding MGP_BALBcJ_T0023214.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166209313 166272544 - MGP_BALBcJ_P0023214 Uck2 protein_coding protein_coding MGP_BALBcJ_T0023215.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166212564 166272108 - MGP_BALBcJ_P0023215 Uck2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023216.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166212950 166223555 - MGP_BALBcJ_P0023216 Uck2 protein_coding protein_coding MGP_BALBcJ_T0023217.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166213055 166230150 - MGP_BALBcJ_P0023217 Uck2 protein_coding protein_coding MGP_BALBcJ_T0023218.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166216612 166271825 - MGP_BALBcJ_P0023218 Uck2 protein_coding protein_coding MGP_BALBcJ_T0023219.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166221411 166272102 - MGP_BALBcJ_P0023219 Uck2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023220.1 MGP_BALBcJ_G0016652.1 mouse_genomes_project 1 166224201 166271931 - Uck2 protein_coding processed_transcript MGP_BALBcJ_T0018867.1 MGP_BALBcJ_G0015777.1 mouse_genomes_project 1 9904738 10024235 - MGP_BALBcJ_P0018867 Slco5a1 protein_coding protein_coding MGP_BALBcJ_T0018868.1 MGP_BALBcJ_G0015777.1 mouse_genomes_project 1 9912566 10024654 - MGP_BALBcJ_P0018868 Slco5a1 protein_coding protein_coding MGP_BALBcJ_T0018869.1 MGP_BALBcJ_G0015777.1 mouse_genomes_project 1 9912566 10024654 - MGP_BALBcJ_P0018869 Slco5a1 protein_coding protein_coding MGP_BALBcJ_T0018870.1 MGP_BALBcJ_G0015777.1 mouse_genomes_project 1 9914208 9958342 - Slco5a1 protein_coding processed_transcript MGP_BALBcJ_T0018871.1 MGP_BALBcJ_G0015777.1 mouse_genomes_project 1 10008659 10024917 - Slco5a1 protein_coding processed_transcript MGP_BALBcJ_T0005649.1 MGP_BALBcJ_G0004758.1 mouse_genomes_project 1 31678805 31685068 - Gm37233 lincRNA lincRNA MGP_BALBcJ_T0023429.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482827 170489661 + MGP_BALBcJ_P0023429 Usf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023430.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482827 170490671 + MGP_BALBcJ_P0023430 Usf1 protein_coding protein_coding MGP_BALBcJ_T0023431.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482827 170488513 + MGP_BALBcJ_P0023431 Usf1 protein_coding protein_coding MGP_BALBcJ_T0023432.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482840 170487269 + Usf1 protein_coding processed_transcript MGP_BALBcJ_T0023433.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482848 170488896 + Usf1 protein_coding retained_intron MGP_BALBcJ_T0023434.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482888 170487145 + Usf1 protein_coding retained_intron MGP_BALBcJ_T0023435.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170482898 170490287 + MGP_BALBcJ_P0023435 Usf1 protein_coding protein_coding MGP_BALBcJ_T0023436.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170483195 170490273 + MGP_BALBcJ_P0023436 Usf1 protein_coding protein_coding MGP_BALBcJ_T0023437.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170488869 170489470 + Usf1 protein_coding retained_intron MGP_BALBcJ_T0023438.1 MGP_BALBcJ_G0016702.1 mouse_genomes_project 1 170488999 170489971 + Usf1 protein_coding retained_intron MGP_BALBcJ_T0012013.1 MGP_BALBcJ_G0010110.1 mouse_genomes_project 1 50112456 50112919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021529.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104114847 104138132 + 2310035C23Rik protein_coding processed_transcript MGP_BALBcJ_T0021530.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104114847 104205044 + MGP_BALBcJ_P0021530 2310035C23Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021531.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104114869 104205047 + MGP_BALBcJ_P0021531 2310035C23Rik protein_coding protein_coding MGP_BALBcJ_T0021532.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104114899 104206163 + MGP_BALBcJ_P0021532 2310035C23Rik protein_coding protein_coding MGP_BALBcJ_T0021533.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104114909 104204683 + MGP_BALBcJ_P0021533 2310035C23Rik protein_coding protein_coding MGP_BALBcJ_T0021534.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104114923 104116137 + 2310035C23Rik protein_coding processed_transcript MGP_BALBcJ_T0021535.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104115427 104189487 + 2310035C23Rik protein_coding retained_intron MGP_BALBcJ_T0021536.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104147771 104206158 + MGP_BALBcJ_P0021536 2310035C23Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021537.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104154889 104167944 + 2310035C23Rik protein_coding retained_intron MGP_BALBcJ_T0021538.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104181835 104185570 + 2310035C23Rik protein_coding retained_intron MGP_BALBcJ_T0021539.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104191197 104204497 + 2310035C23Rik protein_coding retained_intron MGP_BALBcJ_T0021540.1 MGP_BALBcJ_G0016307.1 mouse_genomes_project 1 104191965 104201965 + 2310035C23Rik protein_coding retained_intron MGP_BALBcJ_T0022595.1 MGP_BALBcJ_G0016535.1 mouse_genomes_project 1 151957184 152116082 + MGP_BALBcJ_P0022595 Nmnat2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022596.1 MGP_BALBcJ_G0016535.1 mouse_genomes_project 1 151957189 152116179 + MGP_BALBcJ_P0022596 Nmnat2 protein_coding protein_coding MGP_BALBcJ_T0022597.1 MGP_BALBcJ_G0016535.1 mouse_genomes_project 1 151957232 152091270 + MGP_BALBcJ_P0022597 Nmnat2 protein_coding protein_coding MGP_BALBcJ_T0022598.1 MGP_BALBcJ_G0016535.1 mouse_genomes_project 1 151957465 152079055 + Nmnat2 protein_coding processed_transcript MGP_BALBcJ_T0022599.1 MGP_BALBcJ_G0016535.1 mouse_genomes_project 1 152035934 152076368 + Nmnat2 protein_coding retained_intron MGP_BALBcJ_T0022600.1 MGP_BALBcJ_G0016535.1 mouse_genomes_project 1 152090661 152091779 + Nmnat2 protein_coding processed_transcript MGP_BALBcJ_T0019836.1 MGP_BALBcJ_G0015976.1 mouse_genomes_project 1 54645668 54829784 - MGP_BALBcJ_P0019836 Satb2 protein_coding protein_coding MGP_BALBcJ_T0019837.1 MGP_BALBcJ_G0015976.1 mouse_genomes_project 1 54645673 54829140 - MGP_BALBcJ_P0019837 Satb2 protein_coding protein_coding MGP_BALBcJ_T0019838.1 MGP_BALBcJ_G0015976.1 mouse_genomes_project 1 54645675 54827158 - MGP_BALBcJ_P0019838 Satb2 protein_coding protein_coding MGP_BALBcJ_T0019839.1 MGP_BALBcJ_G0015976.1 mouse_genomes_project 1 54804432 54827126 - MGP_BALBcJ_P0019839 Satb2 protein_coding protein_coding MGP_BALBcJ_T0019840.1 MGP_BALBcJ_G0015976.1 mouse_genomes_project 1 54827025 54835892 - MGP_BALBcJ_P0019840 Satb2 protein_coding protein_coding MGP_BALBcJ_T0005896.1 MGP_BALBcJ_G0004946.1 mouse_genomes_project 1 136763292 136766912 - Gm26979 lincRNA lincRNA MGP_BALBcJ_T0023292.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169879793 169891874 - MGP_BALBcJ_P0023292 Dusp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023293.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169880471 169891957 - MGP_BALBcJ_P0023293 Dusp12 protein_coding protein_coding MGP_BALBcJ_T0023294.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169880471 169891616 - MGP_BALBcJ_P0023294 Dusp12 protein_coding protein_coding MGP_BALBcJ_T0023295.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169880471 169891812 - MGP_BALBcJ_P0023295 Dusp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023296.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169880472 169891824 - MGP_BALBcJ_P0023296 Dusp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023297.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169880803 169891813 - MGP_BALBcJ_P0023297 Dusp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023298.1 MGP_BALBcJ_G0016675.1 mouse_genomes_project 1 169886906 169891421 - MGP_BALBcJ_P0023298 Dusp12 protein_coding protein_coding MGP_BALBcJ_T0000715.1 MGP_BALBcJ_G0000651.1 mouse_genomes_project 1 160862788 160866246 - TEC TEC MGP_BALBcJ_T0099117.1 MGP_BALBcJ_G0037153.1 mouse_genomes_project 1 118165567 118165671 + Gm25322 snRNA snRNA MGP_BALBcJ_T0000372.1 MGP_BALBcJ_G0000313.1 mouse_genomes_project 1 10217211 10219454 - TEC TEC MGP_BALBcJ_T0002932.1 MGP_BALBcJ_G0002755.1 mouse_genomes_project 1 170562804 170567006 - B930036N10Rik antisense antisense MGP_BALBcJ_T0002933.1 MGP_BALBcJ_G0002755.1 mouse_genomes_project 1 170565703 170567006 - B930036N10Rik antisense antisense MGP_BALBcJ_T0022911.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160065458 160096138 - MGP_BALBcJ_P0022911 Dars2 protein_coding protein_coding MGP_BALBcJ_T0022912.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160066044 160096122 - Dars2 protein_coding retained_intron MGP_BALBcJ_T0022913.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160066350 160071795 - Dars2 protein_coding processed_transcript MGP_BALBcJ_T0022914.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160066356 160096136 - Dars2 protein_coding retained_intron MGP_BALBcJ_T0022915.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160069835 160096087 - Dars2 protein_coding retained_intron MGP_BALBcJ_T0022916.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160088065 160089096 - Dars2 protein_coding retained_intron MGP_BALBcJ_T0022917.1 MGP_BALBcJ_G0016589.1 mouse_genomes_project 1 160088424 160096110 - Dars2 protein_coding processed_transcript MGP_BALBcJ_T0002861.1 MGP_BALBcJ_G0002701.1 mouse_genomes_project 1 129576226 129590689 - Gm15848 antisense antisense MGP_BALBcJ_T0002862.1 MGP_BALBcJ_G0002701.1 mouse_genomes_project 1 129576452 129587279 - Gm15848 antisense antisense MGP_BALBcJ_T0002863.1 MGP_BALBcJ_G0002701.1 mouse_genomes_project 1 129584005 129587309 - Gm15848 antisense antisense MGP_BALBcJ_T0005951.1 MGP_BALBcJ_G0004989.1 mouse_genomes_project 1 163960970 163962861 + 1700029M03Rik lincRNA lincRNA MGP_BALBcJ_T0005952.1 MGP_BALBcJ_G0004989.1 mouse_genomes_project 1 163960972 163961452 + 1700029M03Rik lincRNA lincRNA MGP_BALBcJ_T0011885.1 MGP_BALBcJ_G0009982.1 mouse_genomes_project 1 14303576 14303955 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000698.1 MGP_BALBcJ_G0000634.1 mouse_genomes_project 1 158363503 158363915 - TEC TEC MGP_BALBcJ_T0000748.1 MGP_BALBcJ_G0000684.1 mouse_genomes_project 1 176434912 176436205 - TEC TEC MGP_BALBcJ_T0022371.1 MGP_BALBcJ_G0016490.1 mouse_genomes_project 1 137329802 137407399 - MGP_BALBcJ_P0022371 Nek7 protein_coding protein_coding MGP_BALBcJ_T0022372.1 MGP_BALBcJ_G0016490.1 mouse_genomes_project 1 137359959 137464924 - Nek7 protein_coding retained_intron MGP_BALBcJ_T0011891.1 MGP_BALBcJ_G0009988.1 mouse_genomes_project 1 15782749 15783658 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023364.1 MGP_BALBcJ_G0016691.1 mouse_genomes_project 1 170314970 170325544 + MGP_BALBcJ_P0023364 Adamts4 protein_coding protein_coding MGP_BALBcJ_T0023365.1 MGP_BALBcJ_G0016691.1 mouse_genomes_project 1 170316658 170325544 + MGP_BALBcJ_P0023365 Adamts4 protein_coding protein_coding MGP_BALBcJ_T0023464.1 MGP_BALBcJ_G0016712.1 mouse_genomes_project 1 171007429 171009993 + MGP_BALBcJ_P0023464 Gm10521 protein_coding protein_coding MGP_BALBcJ_T0020231.1 MGP_BALBcJ_G0016048.1 mouse_genomes_project 1 63275451 63341752 + MGP_BALBcJ_P0020231 Pth2r protein_coding protein_coding MGP_BALBcJ_T0020232.1 MGP_BALBcJ_G0016048.1 mouse_genomes_project 1 63303485 63388167 + MGP_BALBcJ_P0020232 Pth2r protein_coding protein_coding MGP_BALBcJ_T0021651.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117462660 117684028 - MGP_BALBcJ_P0021651 Gli2 protein_coding protein_coding MGP_BALBcJ_T0021652.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117476998 117683748 - MGP_BALBcJ_P0021652 Gli2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021653.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117476998 117683748 - MGP_BALBcJ_P0021653 Gli2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021654.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117476998 117683748 - MGP_BALBcJ_P0021654 Gli2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021655.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117476998 117683748 - MGP_BALBcJ_P0021655 Gli2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021656.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117476998 117683748 - MGP_BALBcJ_P0021656 Gli2 protein_coding protein_coding MGP_BALBcJ_T0021657.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117477000 117683748 - MGP_BALBcJ_P0021657 Gli2 protein_coding protein_coding MGP_BALBcJ_T0021658.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117477000 117683748 - MGP_BALBcJ_P0021658 Gli2 protein_coding protein_coding MGP_BALBcJ_T0021659.1 MGP_BALBcJ_G0016336.1 mouse_genomes_project 1 117496924 117612868 - Gli2 protein_coding processed_transcript MGP_BALBcJ_T0021414.1 MGP_BALBcJ_G0016281.1 mouse_genomes_project 1 91915283 92025108 + MGP_BALBcJ_P0021414 Farp2 protein_coding protein_coding MGP_BALBcJ_T0021415.1 MGP_BALBcJ_G0016281.1 mouse_genomes_project 1 91915316 91984952 + MGP_BALBcJ_P0021415 Farp2 protein_coding protein_coding MGP_BALBcJ_T0011987.1 MGP_BALBcJ_G0010084.1 mouse_genomes_project 1 43217603 43218779 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020821.1 MGP_BALBcJ_G0016154.1 mouse_genomes_project 1 80473788 80604062 - MGP_BALBcJ_P0020821 Col4a4 protein_coding protein_coding MGP_BALBcJ_T0020822.1 MGP_BALBcJ_G0016154.1 mouse_genomes_project 1 80556086 80604005 - Col4a4 protein_coding retained_intron MGP_BALBcJ_T0016995.1 MGP_BALBcJ_G0015049.1 mouse_genomes_project 1 134962687 134967655 - Gm15850 processed_transcript processed_transcript MGP_BALBcJ_T0016996.1 MGP_BALBcJ_G0015049.1 mouse_genomes_project 1 134964228 134967643 - Gm15850 processed_transcript processed_transcript MGP_BALBcJ_T0016997.1 MGP_BALBcJ_G0015049.1 mouse_genomes_project 1 134964228 134967643 - Gm15850 processed_transcript processed_transcript MGP_BALBcJ_T0016998.1 MGP_BALBcJ_G0015049.1 mouse_genomes_project 1 134964228 134967643 - Gm15850 processed_transcript processed_transcript MGP_BALBcJ_T0019268.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33836647 33846358 - MGP_BALBcJ_P0019268 Sema4c protein_coding protein_coding MGP_BALBcJ_T0019269.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33836650 33846358 - MGP_BALBcJ_P0019269 Sema4c protein_coding protein_coding MGP_BALBcJ_T0019270.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33836650 33845535 - MGP_BALBcJ_P0019270 Sema4c protein_coding protein_coding MGP_BALBcJ_T0019271.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33836650 33845566 - MGP_BALBcJ_P0019271 Sema4c protein_coding protein_coding MGP_BALBcJ_T0019272.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33839734 33840903 - Sema4c protein_coding retained_intron MGP_BALBcJ_T0019273.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33841232 33842239 - Sema4c protein_coding retained_intron MGP_BALBcJ_T0019274.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33842408 33845543 - MGP_BALBcJ_P0019274 Sema4c protein_coding protein_coding MGP_BALBcJ_T0019275.1 MGP_BALBcJ_G0015866.1 mouse_genomes_project 1 33843940 33846259 - MGP_BALBcJ_P0019275 Sema4c protein_coding protein_coding MGP_BALBcJ_T0021790.1 MGP_BALBcJ_G0016366.1 mouse_genomes_project 1 126532008 126557837 - MGP_BALBcJ_P0021790 Map3k19 protein_coding protein_coding MGP_BALBcJ_T0021791.1 MGP_BALBcJ_G0016366.1 mouse_genomes_project 1 126532017 126557837 - MGP_BALBcJ_P0021791 Map3k19 protein_coding protein_coding MGP_BALBcJ_T0021792.1 MGP_BALBcJ_G0016366.1 mouse_genomes_project 1 126532017 126557837 - MGP_BALBcJ_P0021792 Map3k19 protein_coding protein_coding MGP_BALBcJ_T0021793.1 MGP_BALBcJ_G0016366.1 mouse_genomes_project 1 126532026 126557837 - MGP_BALBcJ_P0021793 Map3k19 protein_coding protein_coding MGP_BALBcJ_T0021794.1 MGP_BALBcJ_G0016366.1 mouse_genomes_project 1 126532026 126572183 - MGP_BALBcJ_P0021794 Map3k19 protein_coding unknown_likely_coding MGP_BALBcJ_T0000647.1 MGP_BALBcJ_G0000583.1 mouse_genomes_project 1 137006726 137012590 - TEC TEC MGP_BALBcJ_T0019909.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56291120 56305985 - MGP_BALBcJ_P0019909 Ppil3 protein_coding protein_coding MGP_BALBcJ_T0019910.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56291120 56305980 - MGP_BALBcJ_P0019910 Ppil3 protein_coding protein_coding MGP_BALBcJ_T0019911.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56291123 56306037 - MGP_BALBcJ_P0019911 Ppil3 protein_coding protein_coding MGP_BALBcJ_T0019912.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56291145 56292311 - Ppil3 protein_coding processed_transcript MGP_BALBcJ_T0019913.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56293913 56305920 - MGP_BALBcJ_P0019913 Ppil3 protein_coding protein_coding MGP_BALBcJ_T0019914.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56294541 56305990 - MGP_BALBcJ_P0019914 Ppil3 protein_coding protein_coding MGP_BALBcJ_T0019915.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56294545 56306033 - MGP_BALBcJ_P0019915 Ppil3 protein_coding protein_coding MGP_BALBcJ_T0019916.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56298611 56305727 - Ppil3 protein_coding retained_intron MGP_BALBcJ_T0019917.1 MGP_BALBcJ_G0015989.1 mouse_genomes_project 1 56299265 56301401 - Ppil3 protein_coding retained_intron MGP_BALBcJ_T0012014.1 MGP_BALBcJ_G0010111.1 mouse_genomes_project 1 50345187 50345598 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011949.1 MGP_BALBcJ_G0010046.1 mouse_genomes_project 1 31909782 31910428 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012106.1 MGP_BALBcJ_G0010203.1 mouse_genomes_project 1 85268152 85269501 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005806.1 MGP_BALBcJ_G0004872.1 mouse_genomes_project 1 88814170 88815278 - Gm28722 lincRNA lincRNA MGP_BALBcJ_T0021261.1 MGP_BALBcJ_G0016247.1 mouse_genomes_project 1 89796124 89841744 - MGP_BALBcJ_P0021261 Per2 protein_coding protein_coding MGP_BALBcJ_T0021262.1 MGP_BALBcJ_G0016247.1 mouse_genomes_project 1 89830191 89832325 - Per2 protein_coding processed_transcript MGP_BALBcJ_T0023457.1 MGP_BALBcJ_G0016709.1 mouse_genomes_project 1 170798881 170820302 + MGP_BALBcJ_P0023457 Cd48 protein_coding protein_coding MGP_BALBcJ_T0023458.1 MGP_BALBcJ_G0016709.1 mouse_genomes_project 1 170798882 170820300 + MGP_BALBcJ_P0023458 Cd48 protein_coding protein_coding MGP_BALBcJ_T0012193.1 MGP_BALBcJ_G0010290.1 mouse_genomes_project 1 120626707 120628016 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012032.1 MGP_BALBcJ_G0010129.1 mouse_genomes_project 1 57607482 57607867 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019010.1 MGP_BALBcJ_G0015813.1 mouse_genomes_project 1 18327490 18339283 + MGP_BALBcJ_P0019010 Tmem14a protein_coding protein_coding MGP_BALBcJ_T0019011.1 MGP_BALBcJ_G0015813.1 mouse_genomes_project 1 18327577 18339280 + MGP_BALBcJ_P0019011 Tmem14a protein_coding protein_coding MGP_BALBcJ_T0000624.1 MGP_BALBcJ_G0000562.1 mouse_genomes_project 1 131914086 131917171 - TEC TEC MGP_BALBcJ_T0000625.1 MGP_BALBcJ_G0000562.1 mouse_genomes_project 1 131916568 131917171 - TEC TEC MGP_BALBcJ_T0022953.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160868293 160929013 - MGP_BALBcJ_P0022953 Suco protein_coding protein_coding MGP_BALBcJ_T0022954.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160872579 160874896 - Suco protein_coding retained_intron MGP_BALBcJ_T0022955.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160880179 160881331 - Suco protein_coding retained_intron MGP_BALBcJ_T0022956.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160887199 160896819 - Suco protein_coding processed_transcript MGP_BALBcJ_T0022957.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160890815 160896379 - Suco protein_coding retained_intron MGP_BALBcJ_T0022958.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160896873 160906053 - MGP_BALBcJ_P0022958 Suco protein_coding protein_coding MGP_BALBcJ_T0022959.1 MGP_BALBcJ_G0016597.1 mouse_genomes_project 1 160905139 160909762 - MGP_BALBcJ_P0022959 Suco protein_coding protein_coding MGP_BALBcJ_T0005767.1 MGP_BALBcJ_G0004839.1 mouse_genomes_project 1 74025893 74027992 - Gm29065 lincRNA lincRNA MGP_BALBcJ_T0020544.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73126797 73131929 + MGP_BALBcJ_P0020544 Fam134a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020545.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73126805 73131933 + MGP_BALBcJ_P0020545 Fam134a protein_coding protein_coding MGP_BALBcJ_T0020546.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73126813 73131929 + MGP_BALBcJ_P0020546 Fam134a protein_coding protein_coding MGP_BALBcJ_T0020547.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73126999 73128684 + MGP_BALBcJ_P0020547 Fam134a protein_coding protein_coding MGP_BALBcJ_T0020548.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73127184 73131927 + MGP_BALBcJ_P0020548 Fam134a protein_coding protein_coding MGP_BALBcJ_T0020549.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73127201 73128397 + MGP_BALBcJ_P0020549 Fam134a protein_coding protein_coding MGP_BALBcJ_T0020550.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73127397 73128129 + Fam134a protein_coding retained_intron MGP_BALBcJ_T0020551.1 MGP_BALBcJ_G0016110.1 mouse_genomes_project 1 73129323 73129781 + MGP_BALBcJ_P0020551 Fam134a protein_coding protein_coding MGP_BALBcJ_T0012212.1 MGP_BALBcJ_G0010309.1 mouse_genomes_project 1 130215701 130215957 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000404.1 MGP_BALBcJ_G0000343.1 mouse_genomes_project 1 22536861 22540111 - TEC TEC MGP_BALBcJ_T0019383.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35291113 35303240 - MGP_BALBcJ_P0019383 Txndc9 protein_coding protein_coding MGP_BALBcJ_T0019384.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35293318 35303818 - MGP_BALBcJ_P0019384 Txndc9 protein_coding protein_coding MGP_BALBcJ_T0019385.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35293318 35303168 - MGP_BALBcJ_P0019385 Txndc9 protein_coding protein_coding MGP_BALBcJ_T0019386.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35293320 35303149 - Txndc9 protein_coding retained_intron MGP_BALBcJ_T0019387.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35293564 35301770 - MGP_BALBcJ_P0019387 Txndc9 protein_coding protein_coding MGP_BALBcJ_T0019388.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35293567 35303541 - MGP_BALBcJ_P0019388 Txndc9 protein_coding protein_coding MGP_BALBcJ_T0019389.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35296182 35302583 - MGP_BALBcJ_P0019389 Txndc9 protein_coding protein_coding MGP_BALBcJ_T0019390.1 MGP_BALBcJ_G0015885.1 mouse_genomes_project 1 35301839 35303187 - Txndc9 protein_coding retained_intron MGP_BALBcJ_T0020747.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76452165 76523338 - MGP_BALBcJ_P0020747 Farsb protein_coding protein_coding MGP_BALBcJ_T0020748.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76459260 76523376 - MGP_BALBcJ_P0020748 Farsb protein_coding protein_coding MGP_BALBcJ_T0020749.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76459277 76523341 - MGP_BALBcJ_P0020749 Farsb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020750.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76497485 76523338 - MGP_BALBcJ_P0020750 Farsb protein_coding protein_coding MGP_BALBcJ_T0020751.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76505679 76523274 - Farsb protein_coding processed_transcript MGP_BALBcJ_T0020752.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76507065 76523321 - MGP_BALBcJ_P0020752 Farsb protein_coding protein_coding MGP_BALBcJ_T0020753.1 MGP_BALBcJ_G0016136.1 mouse_genomes_project 1 76512350 76523316 - Farsb protein_coding retained_intron MGP_BALBcJ_T0099081.1 MGP_BALBcJ_G0037117.1 mouse_genomes_project 1 30651470 30651576 + Gm23453 snRNA snRNA MGP_BALBcJ_T0100393.1 MGP_BALBcJ_G0038429.1 mouse_genomes_project 1 160060507 160060587 + Gm26224 snoRNA snoRNA MGP_BALBcJ_T0011938.1 MGP_BALBcJ_G0010035.1 mouse_genomes_project 1 30546610 30547523 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005864.1 MGP_BALBcJ_G0004918.1 mouse_genomes_project 1 119858235 119861491 + Gm29359 lincRNA lincRNA MGP_BALBcJ_T0019620.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43220048 43237454 - MGP_BALBcJ_P0019620 Slc40a1 protein_coding protein_coding MGP_BALBcJ_T0019621.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43227219 43237481 - Slc40a1 protein_coding retained_intron MGP_BALBcJ_T0019622.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43230909 43235181 - Slc40a1 protein_coding processed_transcript MGP_BALBcJ_T0019623.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43230917 43237134 - Slc40a1 protein_coding processed_transcript MGP_BALBcJ_T0019624.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43233198 43238391 - MGP_BALBcJ_P0019624 Slc40a1 protein_coding protein_coding MGP_BALBcJ_T0019625.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43233198 43238391 - MGP_BALBcJ_P0019625 Slc40a1 protein_coding protein_coding MGP_BALBcJ_T0019626.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43233198 43238391 - MGP_BALBcJ_P0019626 Slc40a1 protein_coding protein_coding MGP_BALBcJ_T0019627.1 MGP_BALBcJ_G0015934.1 mouse_genomes_project 1 43235603 43238395 - Slc40a1 protein_coding retained_intron MGP_BALBcJ_T0009463.1 MGP_BALBcJ_G0007588.1 mouse_genomes_project 1 51699172 51699244 + Mir7681 miRNA miRNA MGP_BALBcJ_T0099088.1 MGP_BALBcJ_G0037124.1 mouse_genomes_project 1 55322679 55322836 + Gm24014 snRNA snRNA MGP_BALBcJ_T0023152.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799249 164881743 + MGP_BALBcJ_P0023152 Cd247 protein_coding protein_coding MGP_BALBcJ_T0023153.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799249 164881743 + MGP_BALBcJ_P0023153 Cd247 protein_coding protein_coding MGP_BALBcJ_T0023154.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799249 164881743 + MGP_BALBcJ_P0023154 Cd247 protein_coding protein_coding MGP_BALBcJ_T0023155.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799257 164873413 + MGP_BALBcJ_P0023155 Cd247 protein_coding protein_coding MGP_BALBcJ_T0023156.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799291 164878026 + MGP_BALBcJ_P0023156 Cd247 protein_coding protein_coding MGP_BALBcJ_T0023157.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799333 164879684 + MGP_BALBcJ_P0023157 Cd247 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023158.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164799333 164880839 + MGP_BALBcJ_P0023158 Cd247 protein_coding protein_coding MGP_BALBcJ_T0023159.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164869563 164872902 + Cd247 protein_coding retained_intron MGP_BALBcJ_T0023160.1 MGP_BALBcJ_G0016640.1 mouse_genomes_project 1 164875244 164887902 + Cd247 protein_coding processed_transcript MGP_BALBcJ_T0005919.1 MGP_BALBcJ_G0004965.1 mouse_genomes_project 1 153035691 153042630 - Gm28286 lincRNA lincRNA MGP_BALBcJ_T0021285.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90823846 90858691 - MGP_BALBcJ_P0021285 Ndufa10 protein_coding protein_coding MGP_BALBcJ_T0021286.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90824115 90858588 - MGP_BALBcJ_P0021286 Ndufa10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021287.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90824703 90845577 - Ndufa10 protein_coding retained_intron MGP_BALBcJ_T0021288.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90836912 90847849 - Ndufa10 protein_coding processed_transcript MGP_BALBcJ_T0021289.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90847081 90855722 - Ndufa10 protein_coding retained_intron MGP_BALBcJ_T0021290.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90847962 90855911 - Ndufa10 protein_coding retained_intron MGP_BALBcJ_T0021291.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90852274 90858578 - MGP_BALBcJ_P0021291 Ndufa10 protein_coding protein_coding MGP_BALBcJ_T0021292.1 MGP_BALBcJ_G0016252.1 mouse_genomes_project 1 90857609 90858598 - Ndufa10 protein_coding retained_intron MGP_BALBcJ_T0023121.1 MGP_BALBcJ_G0016635.1 mouse_genomes_project 1 164466105 164470120 + Mpc2 protein_coding retained_intron MGP_BALBcJ_T0023122.1 MGP_BALBcJ_G0016635.1 mouse_genomes_project 1 164466505 164486965 + MGP_BALBcJ_P0023122 Mpc2 protein_coding protein_coding MGP_BALBcJ_T0023123.1 MGP_BALBcJ_G0016635.1 mouse_genomes_project 1 164466692 164483445 + Mpc2 protein_coding retained_intron MGP_BALBcJ_T0023124.1 MGP_BALBcJ_G0016635.1 mouse_genomes_project 1 164466833 164486859 + MGP_BALBcJ_P0023124 Mpc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023125.1 MGP_BALBcJ_G0016635.1 mouse_genomes_project 1 164483892 164486870 + Mpc2 protein_coding processed_transcript MGP_BALBcJ_T0020620.1 MGP_BALBcJ_G0016118.1 mouse_genomes_project 1 73203779 73207339 - MGP_BALBcJ_P0020620 A630095N17Rik protein_coding protein_coding MGP_BALBcJ_T0020621.1 MGP_BALBcJ_G0016118.1 mouse_genomes_project 1 73203940 73215730 - MGP_BALBcJ_P0020621 A630095N17Rik protein_coding protein_coding MGP_BALBcJ_T0020622.1 MGP_BALBcJ_G0016118.1 mouse_genomes_project 1 73214502 73215742 - MGP_BALBcJ_P0020622 A630095N17Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021304.1 MGP_BALBcJ_G0016259.1 mouse_genomes_project 1 90990714 90991723 + MGP_BALBcJ_P0021304 Olfr1410 protein_coding protein_coding MGP_BALBcJ_T0021305.1 MGP_BALBcJ_G0016259.1 mouse_genomes_project 1 90990714 90991683 + MGP_BALBcJ_P0021305 Olfr1410 protein_coding protein_coding MGP_BALBcJ_T0021781.1 MGP_BALBcJ_G0016364.1 mouse_genomes_project 1 126444874 126483420 + MGP_BALBcJ_P0021781 Acmsd protein_coding protein_coding MGP_BALBcJ_T0021782.1 MGP_BALBcJ_G0016364.1 mouse_genomes_project 1 126472132 126483420 + Acmsd protein_coding processed_transcript MGP_BALBcJ_T0012251.1 MGP_BALBcJ_G0010348.1 mouse_genomes_project 1 147989147 147991160 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023776.1 MGP_BALBcJ_G0016801.1 mouse_genomes_project 1 179308778 179310079 + MGP_BALBcJ_P0023776 Gm10518 protein_coding protein_coding MGP_BALBcJ_T0021474.1 MGP_BALBcJ_G0016297.1 mouse_genomes_project 1 95499024 95571171 - MGP_BALBcJ_P0021474 Slco6c1 protein_coding protein_coding MGP_BALBcJ_T0021475.1 MGP_BALBcJ_G0016297.1 mouse_genomes_project 1 95499612 95571266 - MGP_BALBcJ_P0021475 Slco6c1 protein_coding protein_coding MGP_BALBcJ_T0002821.1 MGP_BALBcJ_G0002668.1 mouse_genomes_project 1 73377934 73382168 - Gm15178 antisense antisense MGP_BALBcJ_T0009494.1 MGP_BALBcJ_G0007619.1 mouse_genomes_project 1 91745417 91745481 + Mir6902 miRNA miRNA MGP_BALBcJ_T0000609.1 MGP_BALBcJ_G0000547.1 mouse_genomes_project 1 128005887 128008374 + TEC TEC MGP_BALBcJ_T0023101.1 MGP_BALBcJ_G0016630.1 mouse_genomes_project 1 164142052 164164695 - MGP_BALBcJ_P0023101 Tbx19 protein_coding protein_coding MGP_BALBcJ_T0023102.1 MGP_BALBcJ_G0016630.1 mouse_genomes_project 1 164143086 164153928 - Tbx19 protein_coding processed_transcript MGP_BALBcJ_T0023103.1 MGP_BALBcJ_G0016630.1 mouse_genomes_project 1 164143144 164157652 - MGP_BALBcJ_P0023103 Tbx19 protein_coding protein_coding MGP_BALBcJ_T0023104.1 MGP_BALBcJ_G0016630.1 mouse_genomes_project 1 164146636 164153613 - Tbx19 protein_coding processed_transcript MGP_BALBcJ_T0011837.1 MGP_BALBcJ_G0009934.1 mouse_genomes_project 1 1973064 1973336 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023185.1 MGP_BALBcJ_G0016644.1 mouse_genomes_project 1 165205019 165243348 - MGP_BALBcJ_P0023185 Mael protein_coding protein_coding MGP_BALBcJ_T0023186.1 MGP_BALBcJ_G0016644.1 mouse_genomes_project 1 165205203 165243345 - MGP_BALBcJ_P0023186 Mael protein_coding protein_coding MGP_BALBcJ_T0020883.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82811645 82937104 - MGP_BALBcJ_P0020883 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020884.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82811645 82935892 - MGP_BALBcJ_P0020884 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020885.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82814720 82840062 - MGP_BALBcJ_P0020885 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020886.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82814720 82935876 - MGP_BALBcJ_P0020886 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020887.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82815033 82822489 - MGP_BALBcJ_P0020887 Trip12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020888.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82816666 82819662 - Trip12 protein_coding retained_intron MGP_BALBcJ_T0020889.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82819392 82822560 - Trip12 protein_coding retained_intron MGP_BALBcJ_T0020890.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82835508 82845180 - MGP_BALBcJ_P0020890 Trip12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020891.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82839942 82841328 - Trip12 protein_coding retained_intron MGP_BALBcJ_T0020892.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82840003 82935899 - MGP_BALBcJ_P0020892 Trip12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020893.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82845178 82935892 - MGP_BALBcJ_P0020893 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020894.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82847424 82850960 - Trip12 protein_coding retained_intron MGP_BALBcJ_T0020895.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82858425 82859190 - Trip12 protein_coding retained_intron MGP_BALBcJ_T0020896.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82858461 82886656 - MGP_BALBcJ_P0020896 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020897.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82875469 82877457 - Trip12 protein_coding retained_intron MGP_BALBcJ_T0020898.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82875935 82935889 - MGP_BALBcJ_P0020898 Trip12 protein_coding protein_coding MGP_BALBcJ_T0020899.1 MGP_BALBcJ_G0016166.1 mouse_genomes_project 1 82887091 82936854 - MGP_BALBcJ_P0020899 Trip12 protein_coding protein_coding MGP_BALBcJ_T0011967.1 MGP_BALBcJ_G0010064.1 mouse_genomes_project 1 39548811 39549883 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002877.1 MGP_BALBcJ_G0002711.1 mouse_genomes_project 1 133914897 133919766 + Gm10535 antisense antisense MGP_BALBcJ_T0018980.1 MGP_BALBcJ_G0015804.1 mouse_genomes_project 1 16174767 16235491 + MGP_BALBcJ_P0018980 Tfap2d protein_coding protein_coding MGP_BALBcJ_T0018981.1 MGP_BALBcJ_G0015804.1 mouse_genomes_project 1 16175427 16235323 + MGP_BALBcJ_P0018981 Tfap2d protein_coding unknown_likely_coding MGP_BALBcJ_T0018982.1 MGP_BALBcJ_G0015804.1 mouse_genomes_project 1 16178916 16215313 + Tfap2d protein_coding processed_transcript MGP_BALBcJ_T0000492.1 MGP_BALBcJ_G0000430.1 mouse_genomes_project 1 64656605 64658325 - TEC TEC MGP_BALBcJ_T0005769.1 MGP_BALBcJ_G0004841.1 mouse_genomes_project 1 74501167 74514240 + Gm17751 lincRNA lincRNA MGP_BALBcJ_T0005770.1 MGP_BALBcJ_G0004841.1 mouse_genomes_project 1 74501167 74513658 + Gm17751 lincRNA lincRNA MGP_BALBcJ_T0000584.1 MGP_BALBcJ_G0000522.1 mouse_genomes_project 1 119944703 119945382 - TEC TEC MGP_BALBcJ_T0023198.1 MGP_BALBcJ_G0016647.1 mouse_genomes_project 1 165382507 165407495 - MGP_BALBcJ_P0023198 Pogk protein_coding protein_coding MGP_BALBcJ_T0023199.1 MGP_BALBcJ_G0016647.1 mouse_genomes_project 1 165390113 165407104 - MGP_BALBcJ_P0023199 Pogk protein_coding protein_coding MGP_BALBcJ_T0023200.1 MGP_BALBcJ_G0016647.1 mouse_genomes_project 1 165391499 165407541 - MGP_BALBcJ_P0023200 Pogk protein_coding protein_coding MGP_BALBcJ_T0023201.1 MGP_BALBcJ_G0016647.1 mouse_genomes_project 1 165393282 165407500 - MGP_BALBcJ_P0023201 Pogk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023202.1 MGP_BALBcJ_G0016647.1 mouse_genomes_project 1 165394054 165407576 - MGP_BALBcJ_P0023202 Pogk protein_coding protein_coding MGP_BALBcJ_T0023203.1 MGP_BALBcJ_G0016647.1 mouse_genomes_project 1 165401085 165407002 - MGP_BALBcJ_P0023203 Pogk protein_coding protein_coding MGP_BALBcJ_T0019960.1 MGP_BALBcJ_G0015997.1 mouse_genomes_project 1 56844221 56910844 - MGP_BALBcJ_P0019960 Trak2 protein_coding protein_coding MGP_BALBcJ_T0019961.1 MGP_BALBcJ_G0015997.1 mouse_genomes_project 1 56847276 56882878 - MGP_BALBcJ_P0019961 Trak2 protein_coding protein_coding MGP_BALBcJ_T0019962.1 MGP_BALBcJ_G0015997.1 mouse_genomes_project 1 56847444 56850918 - Trak2 protein_coding retained_intron MGP_BALBcJ_T0019963.1 MGP_BALBcJ_G0015997.1 mouse_genomes_project 1 56863639 56865441 - Trak2 protein_coding processed_transcript MGP_BALBcJ_T0019964.1 MGP_BALBcJ_G0015997.1 mouse_genomes_project 1 56869627 56910843 - MGP_BALBcJ_P0019964 Trak2 protein_coding protein_coding MGP_BALBcJ_T0019965.1 MGP_BALBcJ_G0015997.1 mouse_genomes_project 1 56882442 56910844 - Trak2 protein_coding retained_intron MGP_BALBcJ_T0100369.1 MGP_BALBcJ_G0038405.1 mouse_genomes_project 1 105963751 105963882 - Gm24553 snoRNA snoRNA MGP_BALBcJ_T0099067.1 MGP_BALBcJ_G0037103.1 mouse_genomes_project 1 6502538 6502641 + Gm24765 snRNA snRNA MGP_BALBcJ_T0005721.1 MGP_BALBcJ_G0004806.1 mouse_genomes_project 1 58730489 58755191 + 2310016D23Rik lincRNA lincRNA MGP_BALBcJ_T0022768.1 MGP_BALBcJ_G0016567.1 mouse_genomes_project 1 155525518 155593240 + MGP_BALBcJ_P0022768 Abl2 protein_coding protein_coding MGP_BALBcJ_T0022769.1 MGP_BALBcJ_G0016567.1 mouse_genomes_project 1 155525719 155617681 + MGP_BALBcJ_P0022769 Abl2 protein_coding protein_coding MGP_BALBcJ_T0022770.1 MGP_BALBcJ_G0016567.1 mouse_genomes_project 1 155525781 155610841 + MGP_BALBcJ_P0022770 Abl2 protein_coding protein_coding MGP_BALBcJ_T0022771.1 MGP_BALBcJ_G0016567.1 mouse_genomes_project 1 155583676 155598046 + MGP_BALBcJ_P0022771 Abl2 protein_coding protein_coding MGP_BALBcJ_T0021734.1 MGP_BALBcJ_G0016356.1 mouse_genomes_project 1 121997530 122751717 - MGP_BALBcJ_P0021734 Dpp10 protein_coding protein_coding MGP_BALBcJ_T0021735.1 MGP_BALBcJ_G0016356.1 mouse_genomes_project 1 122007769 122751320 - MGP_BALBcJ_P0021735 Dpp10 protein_coding protein_coding MGP_BALBcJ_T0021736.1 MGP_BALBcJ_G0016356.1 mouse_genomes_project 1 122290792 122336814 - Dpp10 protein_coding processed_transcript MGP_BALBcJ_T0021737.1 MGP_BALBcJ_G0016356.1 mouse_genomes_project 1 122312236 122751412 - Dpp10 protein_coding processed_transcript MGP_BALBcJ_T0023659.1 MGP_BALBcJ_G0016775.1 mouse_genomes_project 1 174973499 175003866 - MGP_BALBcJ_P0023659 Opn3 protein_coding protein_coding MGP_BALBcJ_T0023882.1 MGP_BALBcJ_G0016820.1 mouse_genomes_project 1 180689093 180707013 + MGP_BALBcJ_P0023882 Cnih4 protein_coding protein_coding MGP_BALBcJ_T0023883.1 MGP_BALBcJ_G0016820.1 mouse_genomes_project 1 180689155 180707013 + MGP_BALBcJ_P0023883 Cnih4 protein_coding protein_coding MGP_BALBcJ_T0023884.1 MGP_BALBcJ_G0016820.1 mouse_genomes_project 1 180692900 180704400 + Cnih4 protein_coding processed_transcript MGP_BALBcJ_T0023885.1 MGP_BALBcJ_G0016820.1 mouse_genomes_project 1 180693882 180704368 + Cnih4 protein_coding retained_intron MGP_BALBcJ_T0022190.1 MGP_BALBcJ_G0016455.1 mouse_genomes_project 1 133446110 133542831 + MGP_BALBcJ_P0022190 Syt2 protein_coding protein_coding MGP_BALBcJ_T0022191.1 MGP_BALBcJ_G0016455.1 mouse_genomes_project 1 133446114 133550415 + MGP_BALBcJ_P0022191 Syt2 protein_coding protein_coding MGP_BALBcJ_T0022192.1 MGP_BALBcJ_G0016455.1 mouse_genomes_project 1 133509987 133554147 + MGP_BALBcJ_P0022192 Syt2 protein_coding protein_coding MGP_BALBcJ_T0022193.1 MGP_BALBcJ_G0016455.1 mouse_genomes_project 1 133549574 133563591 + Syt2 protein_coding processed_transcript MGP_BALBcJ_T0021476.1 MGP_BALBcJ_G0016298.1 mouse_genomes_project 1 96046465 96105542 - MGP_BALBcJ_P0021476 D1Ertd622e protein_coding protein_coding MGP_BALBcJ_T0021477.1 MGP_BALBcJ_G0016298.1 mouse_genomes_project 1 96085794 96105542 - MGP_BALBcJ_P0021477 D1Ertd622e protein_coding protein_coding MGP_BALBcJ_T0021478.1 MGP_BALBcJ_G0016298.1 mouse_genomes_project 1 96085794 96105144 - MGP_BALBcJ_P0021478 D1Ertd622e protein_coding protein_coding MGP_BALBcJ_T0021479.1 MGP_BALBcJ_G0016298.1 mouse_genomes_project 1 96088457 96105144 - MGP_BALBcJ_P0021479 D1Ertd622e protein_coding protein_coding MGP_BALBcJ_T0021473.1 MGP_BALBcJ_G0016296.1 mouse_genomes_project 1 95253169 95309490 - MGP_BALBcJ_P0021473 Slco4c1 protein_coding protein_coding MGP_BALBcJ_T0100404.1 MGP_BALBcJ_G0038440.1 mouse_genomes_project 1 162133807 162133929 + Gm22434 snoRNA snoRNA MGP_BALBcJ_T0016963.1 MGP_BALBcJ_G0015040.1 mouse_genomes_project 1 80709670 80821477 - processed_transcript antisense MGP_BALBcJ_T0016964.1 MGP_BALBcJ_G0015040.1 mouse_genomes_project 1 80816329 80821529 - processed_transcript antisense MGP_BALBcJ_T0016965.1 MGP_BALBcJ_G0015040.1 mouse_genomes_project 1 80818189 80821507 - processed_transcript retained_intron MGP_BALBcJ_T0022683.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154205656 154207167 - BC034090 protein_coding retained_intron MGP_BALBcJ_T0022684.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154205656 154237748 - MGP_BALBcJ_P0022684 BC034090 protein_coding protein_coding MGP_BALBcJ_T0022685.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154205658 154225807 - MGP_BALBcJ_P0022685 BC034090 protein_coding protein_coding MGP_BALBcJ_T0022686.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154210706 154218492 - BC034090 protein_coding processed_transcript MGP_BALBcJ_T0022687.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154211456 154218241 - BC034090 protein_coding processed_transcript MGP_BALBcJ_T0022688.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154218756 154222961 - BC034090 protein_coding processed_transcript MGP_BALBcJ_T0022689.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154219106 154225978 - MGP_BALBcJ_P0022689 BC034090 protein_coding protein_coding MGP_BALBcJ_T0022690.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154219190 154234210 - BC034090 protein_coding retained_intron MGP_BALBcJ_T0022691.1 MGP_BALBcJ_G0016554.1 mouse_genomes_project 1 154222180 154224971 - BC034090 protein_coding retained_intron MGP_BALBcJ_T0099083.1 MGP_BALBcJ_G0037119.1 mouse_genomes_project 1 33040471 33040576 + Gm25634 snRNA snRNA MGP_BALBcJ_T0002797.1 MGP_BALBcJ_G0002653.1 mouse_genomes_project 1 59737950 59828475 - Pard3bos1 antisense antisense MGP_BALBcJ_T0002798.1 MGP_BALBcJ_G0002653.1 mouse_genomes_project 1 59756708 59828553 - Pard3bos1 antisense antisense MGP_BALBcJ_T0000451.1 MGP_BALBcJ_G0000389.1 mouse_genomes_project 1 37928142 37932087 - TEC TEC MGP_BALBcJ_T0023144.1 MGP_BALBcJ_G0016638.1 mouse_genomes_project 1 164651802 164715461 - MGP_BALBcJ_P0023144 Rcsd1 protein_coding protein_coding MGP_BALBcJ_T0023145.1 MGP_BALBcJ_G0016638.1 mouse_genomes_project 1 164654233 164715423 - MGP_BALBcJ_P0023145 Rcsd1 protein_coding protein_coding MGP_BALBcJ_T0023146.1 MGP_BALBcJ_G0016638.1 mouse_genomes_project 1 164671078 164716768 - MGP_BALBcJ_P0023146 Rcsd1 protein_coding protein_coding MGP_BALBcJ_T0023147.1 MGP_BALBcJ_G0016638.1 mouse_genomes_project 1 164711896 164717101 - Rcsd1 protein_coding retained_intron MGP_BALBcJ_T0023148.1 MGP_BALBcJ_G0016638.1 mouse_genomes_project 1 164715813 164717132 - Rcsd1 protein_coding processed_transcript MGP_BALBcJ_T0099085.1 MGP_BALBcJ_G0037121.1 mouse_genomes_project 1 46005830 46005951 - Gm23240 snRNA snRNA MGP_BALBcJ_T0022109.1 MGP_BALBcJ_G0016434.1 mouse_genomes_project 1 132449381 132454388 - MGP_BALBcJ_P0022109 protein_coding protein_coding MGP_BALBcJ_T0019481.1 MGP_BALBcJ_G0015905.1 mouse_genomes_project 1 37775381 37792561 + MGP_BALBcJ_P0019481 Il1rl1 protein_coding protein_coding MGP_BALBcJ_T0019482.1 MGP_BALBcJ_G0015905.1 mouse_genomes_project 1 37782435 37787254 + MGP_BALBcJ_P0019482 Il1rl1 protein_coding protein_coding MGP_BALBcJ_T0019483.1 MGP_BALBcJ_G0015905.1 mouse_genomes_project 1 37785473 37805172 + MGP_BALBcJ_P0019483 Il1rl1 protein_coding protein_coding MGP_BALBcJ_T0019484.1 MGP_BALBcJ_G0015905.1 mouse_genomes_project 1 37785622 37793986 + MGP_BALBcJ_P0019484 Il1rl1 protein_coding protein_coding MGP_BALBcJ_T0019485.1 MGP_BALBcJ_G0015905.1 mouse_genomes_project 1 37786474 37805153 + MGP_BALBcJ_P0019485 Il1rl1 protein_coding protein_coding MGP_BALBcJ_T0099161.1 MGP_BALBcJ_G0037197.1 mouse_genomes_project 1 192269970 192270086 + Gm22265 snRNA snRNA MGP_BALBcJ_T0099072.1 MGP_BALBcJ_G0037108.1 mouse_genomes_project 1 10367266 10367378 - Gm23169 snRNA snRNA MGP_BALBcJ_T0099064.1 MGP_BALBcJ_G0037100.1 mouse_genomes_project 1 825254 825312 - Gm27396 snRNA snRNA MGP_BALBcJ_T0005934.1 MGP_BALBcJ_G0004976.1 mouse_genomes_project 1 159101410 159104660 - 4930562F07Rik lincRNA lincRNA MGP_BALBcJ_T0005935.1 MGP_BALBcJ_G0004976.1 mouse_genomes_project 1 159101410 159104593 - 4930562F07Rik lincRNA lincRNA MGP_BALBcJ_T0005936.1 MGP_BALBcJ_G0004976.1 mouse_genomes_project 1 159101645 159104617 - 4930562F07Rik lincRNA lincRNA MGP_BALBcJ_T0005768.1 MGP_BALBcJ_G0004840.1 mouse_genomes_project 1 74438325 74541035 + Gm29069 lincRNA lincRNA MGP_BALBcJ_T0000743.1 MGP_BALBcJ_G0000679.1 mouse_genomes_project 1 176187757 176188480 + TEC TEC MGP_BALBcJ_T0021849.1 MGP_BALBcJ_G0016377.1 mouse_genomes_project 1 129114677 129154874 - MGP_BALBcJ_P0021849 protein_coding protein_coding MGP_BALBcJ_T0021850.1 MGP_BALBcJ_G0016377.1 mouse_genomes_project 1 129122902 129181522 - protein_coding retained_intron MGP_BALBcJ_T0021852.1 MGP_BALBcJ_G0016377.1 mouse_genomes_project 1 129152081 129230238 - protein_coding processed_transcript MGP_BALBcJ_T0000645.1 MGP_BALBcJ_G0000581.1 mouse_genomes_project 1 136795351 136800573 + TEC TEC MGP_BALBcJ_T0002733.1 MGP_BALBcJ_G0002604.1 mouse_genomes_project 1 7037217 7046975 + Gm15818 antisense antisense MGP_BALBcJ_T0023723.1 MGP_BALBcJ_G0016788.1 mouse_genomes_project 1 177354749 177740334 + MGP_BALBcJ_P0023723 Desi2 protein_coding protein_coding MGP_BALBcJ_T0023724.1 MGP_BALBcJ_G0016788.1 mouse_genomes_project 1 177666706 177741897 + MGP_BALBcJ_P0023724 Desi2 protein_coding protein_coding MGP_BALBcJ_T0023725.1 MGP_BALBcJ_G0016788.1 mouse_genomes_project 1 177666821 177748264 + MGP_BALBcJ_P0023725 Desi2 protein_coding protein_coding MGP_BALBcJ_T0023726.1 MGP_BALBcJ_G0016788.1 mouse_genomes_project 1 177747065 177748258 + MGP_BALBcJ_P0023726 Desi2 protein_coding protein_coding MGP_BALBcJ_T0022194.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133555655 133760148 - MGP_BALBcJ_P0022194 Ppp1r12b protein_coding protein_coding MGP_BALBcJ_T0022195.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133556565 133561351 - Ppp1r12b protein_coding processed_transcript MGP_BALBcJ_T0022196.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133560064 133649748 - Ppp1r12b protein_coding processed_transcript MGP_BALBcJ_T0022197.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133560966 133760059 - MGP_BALBcJ_P0022197 Ppp1r12b protein_coding protein_coding MGP_BALBcJ_T0022198.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133567293 133760148 - MGP_BALBcJ_P0022198 Ppp1r12b protein_coding protein_coding MGP_BALBcJ_T0022199.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133581413 133606279 - Ppp1r12b protein_coding retained_intron MGP_BALBcJ_T0022200.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133583152 133585503 - Ppp1r12b protein_coding retained_intron MGP_BALBcJ_T0022201.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133637386 133639144 - Ppp1r12b protein_coding processed_transcript MGP_BALBcJ_T0022202.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133637389 133760136 - Ppp1r12b protein_coding retained_intron MGP_BALBcJ_T0022203.1 MGP_BALBcJ_G0016456.1 mouse_genomes_project 1 133752372 133760150 - MGP_BALBcJ_P0022203 Ppp1r12b protein_coding protein_coding MGP_BALBcJ_T0000658.1 MGP_BALBcJ_G0000594.1 mouse_genomes_project 1 140301619 140304729 - TEC TEC MGP_BALBcJ_T0019530.1 MGP_BALBcJ_G0015918.1 mouse_genomes_project 1 40828134 40917678 + MGP_BALBcJ_P0019530 Nck2 protein_coding protein_coding MGP_BALBcJ_T0019531.1 MGP_BALBcJ_G0015918.1 mouse_genomes_project 1 40829306 40846045 + Nck2 protein_coding processed_transcript MGP_BALBcJ_T0019532.1 MGP_BALBcJ_G0015918.1 mouse_genomes_project 1 40829306 40955086 + MGP_BALBcJ_P0019532 Nck2 protein_coding protein_coding MGP_BALBcJ_T0019533.1 MGP_BALBcJ_G0015918.1 mouse_genomes_project 1 40841123 40846073 + Nck2 protein_coding processed_transcript MGP_BALBcJ_T0019534.1 MGP_BALBcJ_G0015918.1 mouse_genomes_project 1 40916450 40938213 + MGP_BALBcJ_P0019534 Nck2 protein_coding protein_coding MGP_BALBcJ_T0019535.1 MGP_BALBcJ_G0015918.1 mouse_genomes_project 1 40917614 40953913 + MGP_BALBcJ_P0019535 Nck2 protein_coding protein_coding MGP_BALBcJ_T0002962.1 MGP_BALBcJ_G0002781.1 mouse_genomes_project 1 187159662 187194335 - Gm36388 antisense antisense MGP_BALBcJ_T0005639.1 MGP_BALBcJ_G0004749.1 mouse_genomes_project 1 20714562 20739904 + Gm28822 lincRNA lincRNA MGP_BALBcJ_T0021772.1 MGP_BALBcJ_G0016362.1 mouse_genomes_project 1 125924127 126107157 + Mgat5 protein_coding retained_intron MGP_BALBcJ_T0021773.1 MGP_BALBcJ_G0016362.1 mouse_genomes_project 1 125924130 126211306 + MGP_BALBcJ_P0021773 Mgat5 protein_coding protein_coding MGP_BALBcJ_T0021774.1 MGP_BALBcJ_G0016362.1 mouse_genomes_project 1 125924140 126116708 + Mgat5 protein_coding retained_intron MGP_BALBcJ_T0021775.1 MGP_BALBcJ_G0016362.1 mouse_genomes_project 1 126025060 126206946 + MGP_BALBcJ_P0021775 Mgat5 protein_coding protein_coding MGP_BALBcJ_T0019747.1 MGP_BALBcJ_G0015957.1 mouse_genomes_project 1 50877383 50902002 + MGP_BALBcJ_P0019747 Gm28778 protein_coding protein_coding MGP_BALBcJ_T0011921.1 MGP_BALBcJ_G0010018.1 mouse_genomes_project 1 26051358 26053843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020776.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77741889 77796834 - MGP_BALBcJ_P0020776 Wdfy1 protein_coding protein_coding MGP_BALBcJ_T0020777.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77744973 77796803 - MGP_BALBcJ_P0020777 Wdfy1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020778.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77756889 77810889 - MGP_BALBcJ_P0020778 Wdfy1 protein_coding protein_coding MGP_BALBcJ_T0020779.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77758932 77796834 - MGP_BALBcJ_P0020779 Wdfy1 protein_coding protein_coding MGP_BALBcJ_T0020780.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77758945 77796834 - MGP_BALBcJ_P0020780 Wdfy1 protein_coding protein_coding MGP_BALBcJ_T0020781.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77759134 77763635 - Wdfy1 protein_coding processed_transcript MGP_BALBcJ_T0020782.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77767405 77796786 - Wdfy1 protein_coding retained_intron MGP_BALBcJ_T0020783.1 MGP_BALBcJ_G0016144.1 mouse_genomes_project 1 77767638 77797106 - MGP_BALBcJ_P0020783 Wdfy1 protein_coding protein_coding MGP_BALBcJ_T0101595.1 MGP_BALBcJ_G0039620.1 mouse_genomes_project 1 182102496 182103430 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101596.1 MGP_BALBcJ_G0039620.1 mouse_genomes_project 1 182102918 182112046 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0000561.1 MGP_BALBcJ_G0000499.1 mouse_genomes_project 1 91935499 91937886 + TEC TEC MGP_BALBcJ_T0000444.1 MGP_BALBcJ_G0000382.1 mouse_genomes_project 1 34962492 34964412 + TEC TEC MGP_BALBcJ_T0022373.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137667186 137684425 - MGP_BALBcJ_P0022373 Lhx9 protein_coding protein_coding MGP_BALBcJ_T0022374.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137667186 137689969 - MGP_BALBcJ_P0022374 Lhx9 protein_coding protein_coding MGP_BALBcJ_T0022375.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137667186 137690907 - MGP_BALBcJ_P0022375 Lhx9 protein_coding protein_coding MGP_BALBcJ_T0022376.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137671145 137690057 - MGP_BALBcJ_P0022376 Lhx9 protein_coding protein_coding MGP_BALBcJ_T0022377.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137672976 137684397 - MGP_BALBcJ_P0022377 Lhx9 protein_coding protein_coding MGP_BALBcJ_T0022378.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137673746 137675662 - Lhx9 protein_coding retained_intron MGP_BALBcJ_T0022379.1 MGP_BALBcJ_G0016491.1 mouse_genomes_project 1 137674882 137684422 - MGP_BALBcJ_P0022379 Lhx9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021469.1 MGP_BALBcJ_G0016295.1 mouse_genomes_project 1 94017080 94097036 - MGP_BALBcJ_P0021469 St8sia4 protein_coding protein_coding MGP_BALBcJ_T0021470.1 MGP_BALBcJ_G0016295.1 mouse_genomes_project 1 94048925 94097000 - MGP_BALBcJ_P0021470 St8sia4 protein_coding protein_coding MGP_BALBcJ_T0021471.1 MGP_BALBcJ_G0016295.1 mouse_genomes_project 1 94087200 94097033 - St8sia4 protein_coding retained_intron MGP_BALBcJ_T0021472.1 MGP_BALBcJ_G0016295.1 mouse_genomes_project 1 94092840 94097030 - St8sia4 protein_coding retained_intron MGP_BALBcJ_T0019663.1 MGP_BALBcJ_G0015944.1 mouse_genomes_project 1 49579657 49702948 + MGP_BALBcJ_P0019663 Stat4 protein_coding protein_coding MGP_BALBcJ_T0019664.1 MGP_BALBcJ_G0015944.1 mouse_genomes_project 1 49600314 49702943 + MGP_BALBcJ_P0019664 Stat4 protein_coding protein_coding MGP_BALBcJ_T0019665.1 MGP_BALBcJ_G0015944.1 mouse_genomes_project 1 49600697 49664947 + Stat4 protein_coding retained_intron MGP_BALBcJ_T0019666.1 MGP_BALBcJ_G0015944.1 mouse_genomes_project 1 49701207 49702947 + Stat4 protein_coding retained_intron MGP_BALBcJ_T0022078.1 MGP_BALBcJ_G0016428.1 mouse_genomes_project 1 132140192 132150008 + MGP_BALBcJ_P0022078 Ren1 protein_coding protein_coding MGP_BALBcJ_T0022079.1 MGP_BALBcJ_G0016428.1 mouse_genomes_project 1 132141591 132143959 + MGP_BALBcJ_P0022079 Ren1 protein_coding protein_coding MGP_BALBcJ_T0012056.1 MGP_BALBcJ_G0010153.1 mouse_genomes_project 1 62928315 62928694 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000473.1 MGP_BALBcJ_G0000411.1 mouse_genomes_project 1 57380953 57382595 - TEC TEC MGP_BALBcJ_T0000639.1 MGP_BALBcJ_G0000576.1 mouse_genomes_project 1 136656262 136656557 + TEC TEC MGP_BALBcJ_T0019128.1 MGP_BALBcJ_G0015841.1 mouse_genomes_project 1 30988233 31000654 - MGP_BALBcJ_P0019128 Bag2 protein_coding protein_coding MGP_BALBcJ_T0019129.1 MGP_BALBcJ_G0015841.1 mouse_genomes_project 1 30989487 30991486 - Bag2 protein_coding retained_intron MGP_BALBcJ_T0019130.1 MGP_BALBcJ_G0015841.1 mouse_genomes_project 1 30989550 31000600 - MGP_BALBcJ_P0019130 Bag2 protein_coding protein_coding MGP_BALBcJ_T0019131.1 MGP_BALBcJ_G0015841.1 mouse_genomes_project 1 30999639 31000586 - Bag2 protein_coding retained_intron MGP_BALBcJ_T0012187.1 MGP_BALBcJ_G0010284.1 mouse_genomes_project 1 118534137 118534801 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012070.1 MGP_BALBcJ_G0010167.1 mouse_genomes_project 1 67372575 67373326 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019064.1 MGP_BALBcJ_G0015827.1 mouse_genomes_project 1 21417427 21610852 - Col19a1 protein_coding processed_transcript MGP_BALBcJ_T0019065.1 MGP_BALBcJ_G0015827.1 mouse_genomes_project 1 21419529 21741063 - MGP_BALBcJ_P0019065 Col19a1 protein_coding protein_coding MGP_BALBcJ_T0019066.1 MGP_BALBcJ_G0015827.1 mouse_genomes_project 1 21435550 21741002 - MGP_BALBcJ_P0019066 Col19a1 protein_coding protein_coding MGP_BALBcJ_T0023264.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169136596 169171873 - MGP_BALBcJ_P0023264 Uap1 protein_coding protein_coding MGP_BALBcJ_T0023265.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169136660 169171862 - MGP_BALBcJ_P0023265 Uap1 protein_coding protein_coding MGP_BALBcJ_T0023266.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169136661 169171862 - MGP_BALBcJ_P0023266 Uap1 protein_coding protein_coding MGP_BALBcJ_T0023267.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169136692 169138372 - Uap1 protein_coding retained_intron MGP_BALBcJ_T0023268.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169144324 169171708 - Uap1 protein_coding retained_intron MGP_BALBcJ_T0023269.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169156998 169157574 - Uap1 protein_coding processed_transcript MGP_BALBcJ_T0023270.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169157016 169171682 - Uap1 protein_coding processed_transcript MGP_BALBcJ_T0023271.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169161935 169171705 - Uap1 protein_coding retained_intron MGP_BALBcJ_T0023272.1 MGP_BALBcJ_G0016666.1 mouse_genomes_project 1 169165967 169171802 - Uap1 protein_coding processed_transcript MGP_BALBcJ_T0000398.1 MGP_BALBcJ_G0000337.1 mouse_genomes_project 1 22438765 22440328 - TEC TEC MGP_BALBcJ_T0023538.1 MGP_BALBcJ_G0016728.1 mouse_genomes_project 1 171591733 171594949 + MGP_BALBcJ_P0023538 Slamf9 protein_coding protein_coding MGP_BALBcJ_T0018841.1 MGP_BALBcJ_G0015774.1 mouse_genomes_project 1 8045572 8361103 + MGP_BALBcJ_P0018841 Prex2 protein_coding protein_coding MGP_BALBcJ_T0018842.1 MGP_BALBcJ_G0015774.1 mouse_genomes_project 1 8045625 8048713 + Prex2 protein_coding retained_intron MGP_BALBcJ_T0018843.1 MGP_BALBcJ_G0015774.1 mouse_genomes_project 1 8148991 8203878 + Prex2 protein_coding retained_intron MGP_BALBcJ_T0018844.1 MGP_BALBcJ_G0015774.1 mouse_genomes_project 1 8193793 8214356 + Prex2 protein_coding retained_intron MGP_BALBcJ_T0018847.1 MGP_BALBcJ_G0015774.1 mouse_genomes_project 1 8323092 8355398 + MGP_BALBcJ_P0018847 Prex2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018848.1 MGP_BALBcJ_G0015774.1 mouse_genomes_project 1 8341404 8355597 + MGP_BALBcJ_P0018848 Prex2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020786.1 MGP_BALBcJ_G0016146.1 mouse_genomes_project 1 77828955 77894337 - MGP_BALBcJ_P0020786 Serpine2 protein_coding protein_coding MGP_BALBcJ_T0020787.1 MGP_BALBcJ_G0016146.1 mouse_genomes_project 1 77831553 77857153 - MGP_BALBcJ_P0020787 Serpine2 protein_coding protein_coding MGP_BALBcJ_T0020788.1 MGP_BALBcJ_G0016146.1 mouse_genomes_project 1 77837764 77896824 - MGP_BALBcJ_P0020788 Serpine2 protein_coding protein_coding MGP_BALBcJ_T0020789.1 MGP_BALBcJ_G0016146.1 mouse_genomes_project 1 77850352 77894337 - Serpine2 protein_coding retained_intron MGP_BALBcJ_T0020790.1 MGP_BALBcJ_G0016146.1 mouse_genomes_project 1 77852748 77856135 - Serpine2 protein_coding retained_intron MGP_BALBcJ_T0020791.1 MGP_BALBcJ_G0016146.1 mouse_genomes_project 1 77892490 77893628 - Serpine2 protein_coding retained_intron MGP_BALBcJ_T0099143.1 MGP_BALBcJ_G0037179.1 mouse_genomes_project 1 169758468 169758575 - Gm23523 snRNA snRNA MGP_BALBcJ_T0099066.1 MGP_BALBcJ_G0037102.1 mouse_genomes_project 1 1766061 1766164 - Gm25493 snRNA snRNA MGP_BALBcJ_T0005821.1 MGP_BALBcJ_G0004886.1 mouse_genomes_project 1 94128413 94146243 - 4930598F16Rik lincRNA lincRNA MGP_BALBcJ_T0023249.1 MGP_BALBcJ_G0016662.1 mouse_genomes_project 1 168734513 168740685 - MGP_BALBcJ_P0023249 Rgs4 protein_coding protein_coding MGP_BALBcJ_T0023250.1 MGP_BALBcJ_G0016662.1 mouse_genomes_project 1 168734518 168740688 - MGP_BALBcJ_P0023250 Rgs4 protein_coding protein_coding MGP_BALBcJ_T0023251.1 MGP_BALBcJ_G0016662.1 mouse_genomes_project 1 168736870 168740669 - Rgs4 protein_coding retained_intron MGP_BALBcJ_T0019810.1 MGP_BALBcJ_G0015969.1 mouse_genomes_project 1 52949093 52952282 + MGP_BALBcJ_P0019810 Hspe1 protein_coding protein_coding MGP_BALBcJ_T0019811.1 MGP_BALBcJ_G0015969.1 mouse_genomes_project 1 52949275 52950882 + Hspe1 protein_coding retained_intron MGP_BALBcJ_T0005786.1 MGP_BALBcJ_G0004854.1 mouse_genomes_project 1 81162484 81163441 - Krtap28-10 lincRNA lincRNA MGP_BALBcJ_T0000608.1 MGP_BALBcJ_G0000546.1 mouse_genomes_project 1 126869591 126870906 + TEC TEC MGP_BALBcJ_T0011954.1 MGP_BALBcJ_G0010051.1 mouse_genomes_project 1 32239833 32240269 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005897.1 MGP_BALBcJ_G0004947.1 mouse_genomes_project 1 136773988 136815538 - Gm26936 lincRNA lincRNA MGP_BALBcJ_T0005898.1 MGP_BALBcJ_G0004947.1 mouse_genomes_project 1 136810130 136815513 - Gm26936 lincRNA lincRNA MGP_BALBcJ_T0100399.1 MGP_BALBcJ_G0038435.1 mouse_genomes_project 1 160062707 160062788 + Snord80 snoRNA snoRNA MGP_BALBcJ_T0002903.1 MGP_BALBcJ_G0002733.1 mouse_genomes_project 1 157483865 157554008 - Gm37679 antisense antisense MGP_BALBcJ_T0011948.1 MGP_BALBcJ_G0010045.1 mouse_genomes_project 1 31885644 31887040 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018922.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13274191 13583487 - MGP_BALBcJ_P0018922 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018923.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13274318 13583409 - MGP_BALBcJ_P0018923 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018924.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13274321 13583409 - MGP_BALBcJ_P0018924 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018925.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13274327 13583487 - MGP_BALBcJ_P0018925 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018926.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13274333 13584322 - MGP_BALBcJ_P0018926 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018927.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13396030 13575599 - MGP_BALBcJ_P0018927 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018928.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13396109 13583428 - MGP_BALBcJ_P0018928 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018929.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13396194 13584277 - MGP_BALBcJ_P0018929 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018930.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13396819 13428378 - Stau2 protein_coding processed_transcript MGP_BALBcJ_T0018931.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13396912 13583421 - MGP_BALBcJ_P0018931 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018932.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13396920 13583434 - MGP_BALBcJ_P0018932 Stau2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018933.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13398215 13583488 - MGP_BALBcJ_P0018933 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018934.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13444626 13583451 - MGP_BALBcJ_P0018934 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018935.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13493060 13584290 - MGP_BALBcJ_P0018935 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018936.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13512328 13583441 - MGP_BALBcJ_P0018936 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018937.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13512717 13584231 - MGP_BALBcJ_P0018937 Stau2 protein_coding protein_coding MGP_BALBcJ_T0018938.1 MGP_BALBcJ_G0015792.1 mouse_genomes_project 1 13512826 13584230 - MGP_BALBcJ_P0018938 Stau2 protein_coding protein_coding MGP_BALBcJ_T0005908.1 MGP_BALBcJ_G0004956.1 mouse_genomes_project 1 148357073 148394464 - Gm29398 lincRNA lincRNA MGP_BALBcJ_T0005909.1 MGP_BALBcJ_G0004956.1 mouse_genomes_project 1 148365304 148394463 - Gm29398 lincRNA lincRNA MGP_BALBcJ_T0000654.1 MGP_BALBcJ_G0000590.1 mouse_genomes_project 1 137924250 137928373 - TEC TEC MGP_BALBcJ_T0000357.1 MGP_BALBcJ_G0000298.1 mouse_genomes_project 1 4188694 4192728 + TEC TEC MGP_BALBcJ_T0009488.1 MGP_BALBcJ_G0007613.1 mouse_genomes_project 1 84480025 84480172 - Mir3535 miRNA miRNA MGP_BALBcJ_T0005885.1 MGP_BALBcJ_G0004938.1 mouse_genomes_project 1 135086518 135089330 + A430034D21Rik lincRNA lincRNA MGP_BALBcJ_T0000583.1 MGP_BALBcJ_G0000521.1 mouse_genomes_project 1 119518846 119521959 + TEC TEC MGP_BALBcJ_T0005743.1 MGP_BALBcJ_G0004825.1 mouse_genomes_project 1 67485871 67489303 - Gm29113 lincRNA lincRNA MGP_BALBcJ_T0009475.1 MGP_BALBcJ_G0007600.1 mouse_genomes_project 1 72245930 72245997 - Mir1928 miRNA miRNA MGP_BALBcJ_T0021191.1 MGP_BALBcJ_G0016236.1 mouse_genomes_project 1 89336670 89348178 - MGP_BALBcJ_P0021191 Rab17 protein_coding protein_coding MGP_BALBcJ_T0021192.1 MGP_BALBcJ_G0016236.1 mouse_genomes_project 1 89336672 89346184 - MGP_BALBcJ_P0021192 Rab17 protein_coding protein_coding MGP_BALBcJ_T0021193.1 MGP_BALBcJ_G0016236.1 mouse_genomes_project 1 89337268 89348065 - Rab17 protein_coding processed_transcript MGP_BALBcJ_T0021194.1 MGP_BALBcJ_G0016236.1 mouse_genomes_project 1 89337391 89346134 - Rab17 protein_coding processed_transcript MGP_BALBcJ_T0021195.1 MGP_BALBcJ_G0016236.1 mouse_genomes_project 1 89338520 89348161 - MGP_BALBcJ_P0021195 Rab17 protein_coding protein_coding MGP_BALBcJ_T0000795.1 MGP_BALBcJ_G0000728.1 mouse_genomes_project 1 193042690 193044785 + TEC TEC MGP_BALBcJ_T0011854.1 MGP_BALBcJ_G0009951.1 mouse_genomes_project 1 4657071 4659167 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101835.1 MGP_BALBcJ_G0039760.1 mouse_genomes_project 1 172624062 172626102 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0012130.1 MGP_BALBcJ_G0010227.1 mouse_genomes_project 1 98713600 98714102 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023966.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182806533 182827667 - MGP_BALBcJ_P0023966 Brox protein_coding protein_coding MGP_BALBcJ_T0023967.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182806535 182827931 - MGP_BALBcJ_P0023967 Brox protein_coding protein_coding MGP_BALBcJ_T0023968.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182807250 182827944 - MGP_BALBcJ_P0023968 Brox protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023969.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182814464 182816878 - Brox protein_coding retained_intron MGP_BALBcJ_T0023970.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182816821 182823401 - Brox protein_coding retained_intron MGP_BALBcJ_T0023971.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182816876 182827903 - MGP_BALBcJ_P0023971 Brox protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023972.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182818436 182822968 - Brox protein_coding retained_intron MGP_BALBcJ_T0023973.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182821538 182827931 - Brox protein_coding processed_transcript MGP_BALBcJ_T0023974.1 MGP_BALBcJ_G0016838.1 mouse_genomes_project 1 182822632 182826548 - MGP_BALBcJ_P0023974 Brox protein_coding protein_coding MGP_BALBcJ_T0023845.1 MGP_BALBcJ_G0016810.1 mouse_genomes_project 1 180232735 180261043 + MGP_BALBcJ_P0023845 Acbd3 protein_coding protein_coding MGP_BALBcJ_T0023846.1 MGP_BALBcJ_G0016810.1 mouse_genomes_project 1 180236546 180241403 + Acbd3 protein_coding retained_intron MGP_BALBcJ_T0000649.1 MGP_BALBcJ_G0000585.1 mouse_genomes_project 1 137397644 137400048 - TEC TEC MGP_BALBcJ_T0099063.1 MGP_BALBcJ_G0037099.1 mouse_genomes_project 1 112137 112247 + Gm26206 snRNA snRNA MGP_BALBcJ_T0021660.1 MGP_BALBcJ_G0016337.1 mouse_genomes_project 1 118049665 118056428 - MGP_BALBcJ_P0021660 Inhbb protein_coding protein_coding MGP_BALBcJ_T0012216.1 MGP_BALBcJ_G0010313.1 mouse_genomes_project 1 132826942 132827880 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023356.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170298755 170299447 - Ndufs2 protein_coding retained_intron MGP_BALBcJ_T0023357.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170298755 170311720 - Ndufs2 protein_coding retained_intron MGP_BALBcJ_T0023358.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170298755 170301433 - Ndufs2 protein_coding processed_transcript MGP_BALBcJ_T0023359.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170298755 170311720 - MGP_BALBcJ_P0023359 Ndufs2 protein_coding protein_coding MGP_BALBcJ_T0023360.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170298755 170311720 - MGP_BALBcJ_P0023360 Ndufs2 protein_coding protein_coding MGP_BALBcJ_T0023361.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170301049 170303949 - Ndufs2 protein_coding processed_transcript MGP_BALBcJ_T0023362.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170302424 170315793 - MGP_BALBcJ_P0023362 Ndufs2 protein_coding protein_coding MGP_BALBcJ_T0023363.1 MGP_BALBcJ_G0016690.1 mouse_genomes_project 1 170302642 170315930 - MGP_BALBcJ_P0023363 Ndufs2 protein_coding protein_coding MGP_BALBcJ_T0102110.1 MGP_BALBcJ_G0039927.1 mouse_genomes_project 1 180601953 180610998 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000364.1 MGP_BALBcJ_G0000305.1 mouse_genomes_project 1 7112397 7113317 - TEC TEC MGP_BALBcJ_T0021619.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017198 117233897 + MGP_BALBcJ_P0021619 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021620.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017198 117233897 + MGP_BALBcJ_P0021620 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021621.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017198 117233897 + MGP_BALBcJ_P0021621 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021622.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017198 117233962 + MGP_BALBcJ_P0021622 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021623.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017484 117129498 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021624.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017596 117231660 + MGP_BALBcJ_P0021624 Clasp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021625.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017605 117232077 + MGP_BALBcJ_P0021625 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021626.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017605 117232077 + MGP_BALBcJ_P0021626 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021627.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017605 117233956 + MGP_BALBcJ_P0021627 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021628.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017606 117232234 + MGP_BALBcJ_P0021628 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021629.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017607 117133880 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021630.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017623 117231660 + MGP_BALBcJ_P0021630 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021631.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117017667 117233705 + MGP_BALBcJ_P0021631 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021632.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117047718 117233965 + MGP_BALBcJ_P0021632 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021633.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117047882 117237129 + MGP_BALBcJ_P0021633 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021634.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117047882 117231607 + MGP_BALBcJ_P0021634 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021635.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117087739 117124065 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021636.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117097680 117231594 + Clasp1 protein_coding processed_transcript MGP_BALBcJ_T0021637.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117097735 117130182 + Clasp1 protein_coding processed_transcript MGP_BALBcJ_T0021638.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117098496 117127675 + Clasp1 protein_coding processed_transcript MGP_BALBcJ_T0021639.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117099681 117131260 + MGP_BALBcJ_P0021639 Clasp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021640.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117109936 117231632 + MGP_BALBcJ_P0021640 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021641.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117136541 117152601 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021642.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117139021 117175344 + MGP_BALBcJ_P0021642 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021643.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117158824 117233922 + MGP_BALBcJ_P0021643 Clasp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021644.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117161511 117164236 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021645.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117174643 117175363 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021646.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117175409 117211713 + MGP_BALBcJ_P0021646 Clasp1 protein_coding protein_coding MGP_BALBcJ_T0021647.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117184612 117186707 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0021648.1 MGP_BALBcJ_G0016334.1 mouse_genomes_project 1 117228403 117233897 + Clasp1 protein_coding retained_intron MGP_BALBcJ_T0000603.1 MGP_BALBcJ_G0000541.1 mouse_genomes_project 1 126124714 126125257 + TEC TEC MGP_BALBcJ_T0023732.1 MGP_BALBcJ_G0016791.1 mouse_genomes_project 1 177818360 177831815 - MGP_BALBcJ_P0023732 Hnrnpu protein_coding protein_coding MGP_BALBcJ_T0023733.1 MGP_BALBcJ_G0016791.1 mouse_genomes_project 1 177818849 177824338 - Hnrnpu protein_coding retained_intron MGP_BALBcJ_T0023734.1 MGP_BALBcJ_G0016791.1 mouse_genomes_project 1 177825883 177826944 - Hnrnpu protein_coding retained_intron MGP_BALBcJ_T0023735.1 MGP_BALBcJ_G0016791.1 mouse_genomes_project 1 177826120 177828564 - Hnrnpu protein_coding processed_transcript MGP_BALBcJ_T0023736.1 MGP_BALBcJ_G0016791.1 mouse_genomes_project 1 177829659 177830423 - Hnrnpu protein_coding retained_intron MGP_BALBcJ_T0024319.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194709361 194755191 - MGP_BALBcJ_P0024319 Cr2 protein_coding protein_coding MGP_BALBcJ_T0024320.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194709361 194755190 - MGP_BALBcJ_P0024320 Cr2 protein_coding protein_coding MGP_BALBcJ_T0024321.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194709367 194737413 - MGP_BALBcJ_P0024321 Cr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024322.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194711869 194731898 - Cr2 protein_coding retained_intron MGP_BALBcJ_T0024323.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194712219 194729251 - MGP_BALBcJ_P0024323 Cr2 protein_coding protein_coding MGP_BALBcJ_T0024324.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194712239 194755123 - MGP_BALBcJ_P0024324 Cr2 protein_coding protein_coding MGP_BALBcJ_T0024325.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194713314 194731989 - Cr2 protein_coding retained_intron MGP_BALBcJ_T0024326.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194713740 194755085 - MGP_BALBcJ_P0024326 Cr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0024327.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194741027 194746247 - Cr2 protein_coding processed_transcript MGP_BALBcJ_T0024328.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194743574 194748998 - MGP_BALBcJ_P0024328 Cr2 protein_coding protein_coding MGP_BALBcJ_T0024329.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194743661 194755190 - Cr2 protein_coding processed_transcript MGP_BALBcJ_T0024330.1 MGP_BALBcJ_G0016906.1 mouse_genomes_project 1 194748474 194755190 - Cr2 protein_coding processed_transcript MGP_BALBcJ_T0000665.1 MGP_BALBcJ_G0000601.1 mouse_genomes_project 1 146433567 146437834 + TEC TEC MGP_BALBcJ_T0012191.1 MGP_BALBcJ_G0010288.1 mouse_genomes_project 1 120170571 120171036 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022807.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156112394 156391089 - MGP_BALBcJ_P0022807 Rasal2 protein_coding protein_coding MGP_BALBcJ_T0022808.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156117747 156390428 - MGP_BALBcJ_P0022808 Rasal2 protein_coding protein_coding MGP_BALBcJ_T0022809.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156153147 156222928 - MGP_BALBcJ_P0022809 Rasal2 protein_coding protein_coding MGP_BALBcJ_T0022810.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156153340 156237006 - MGP_BALBcJ_P0022810 Rasal2 protein_coding protein_coding MGP_BALBcJ_T0022811.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156156304 156158619 - Rasal2 protein_coding processed_transcript MGP_BALBcJ_T0022812.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156156304 156208681 - MGP_BALBcJ_P0022812 Rasal2 protein_coding protein_coding MGP_BALBcJ_T0022813.1 MGP_BALBcJ_G0016573.1 mouse_genomes_project 1 156262945 156391089 - Rasal2 protein_coding retained_intron MGP_BALBcJ_T0020208.1 MGP_BALBcJ_G0016043.1 mouse_genomes_project 1 63090137 63093680 - Cryga protein_coding retained_intron MGP_BALBcJ_T0020209.1 MGP_BALBcJ_G0016043.1 mouse_genomes_project 1 63090137 63093693 - MGP_BALBcJ_P0020209 Cryga protein_coding protein_coding MGP_BALBcJ_T0022470.1 MGP_BALBcJ_G0016512.1 mouse_genomes_project 1 143613336 143638114 - MGP_BALBcJ_P0022470 Rgs18 protein_coding protein_coding MGP_BALBcJ_T0005910.1 MGP_BALBcJ_G0004957.1 mouse_genomes_project 1 149098844 149104750 - Ptgs2os2 lincRNA lincRNA MGP_BALBcJ_T0019926.1 MGP_BALBcJ_G0015991.1 mouse_genomes_project 1 56323428 56366301 - MGP_BALBcJ_P0019926 Orc2 protein_coding protein_coding MGP_BALBcJ_T0019927.1 MGP_BALBcJ_G0015991.1 mouse_genomes_project 1 56324861 56362608 - MGP_BALBcJ_P0019927 Orc2 protein_coding protein_coding MGP_BALBcJ_T0019928.1 MGP_BALBcJ_G0015991.1 mouse_genomes_project 1 56341024 56342163 - Orc2 protein_coding retained_intron MGP_BALBcJ_T0019929.1 MGP_BALBcJ_G0015991.1 mouse_genomes_project 1 56344389 56366117 - MGP_BALBcJ_P0019929 Orc2 protein_coding protein_coding MGP_BALBcJ_T0019930.1 MGP_BALBcJ_G0015991.1 mouse_genomes_project 1 56361109 56366147 - MGP_BALBcJ_P0019930 Orc2 protein_coding protein_coding MGP_BALBcJ_T0023533.1 MGP_BALBcJ_G0016725.1 mouse_genomes_project 1 171433042 171441711 - MGP_BALBcJ_P0023533 Kcnj9 protein_coding protein_coding MGP_BALBcJ_T0023534.1 MGP_BALBcJ_G0016725.1 mouse_genomes_project 1 171434642 171441675 - MGP_BALBcJ_P0023534 Kcnj9 protein_coding protein_coding MGP_BALBcJ_T0023535.1 MGP_BALBcJ_G0016725.1 mouse_genomes_project 1 171437698 171440500 - Kcnj9 protein_coding retained_intron MGP_BALBcJ_T0023099.1 MGP_BALBcJ_G0016628.1 mouse_genomes_project 1 163802661 163830268 + MGP_BALBcJ_P0023099 Dpt protein_coding protein_coding MGP_BALBcJ_T0024105.1 MGP_BALBcJ_G0016866.1 mouse_genomes_project 1 189280362 189430407 + MGP_BALBcJ_P0024105 Ptpn14 protein_coding protein_coding MGP_BALBcJ_T0024106.1 MGP_BALBcJ_G0016866.1 mouse_genomes_project 1 189280369 189394131 + Ptpn14 protein_coding retained_intron MGP_BALBcJ_T0024107.1 MGP_BALBcJ_G0016866.1 mouse_genomes_project 1 189338946 189405508 + Ptpn14 protein_coding retained_intron MGP_BALBcJ_T0024108.1 MGP_BALBcJ_G0016866.1 mouse_genomes_project 1 189338982 189423811 + MGP_BALBcJ_P0024108 Ptpn14 protein_coding protein_coding MGP_BALBcJ_T0024109.1 MGP_BALBcJ_G0016866.1 mouse_genomes_project 1 189398565 189405996 + Ptpn14 protein_coding retained_intron MGP_BALBcJ_T0024110.1 MGP_BALBcJ_G0016866.1 mouse_genomes_project 1 189416421 189417196 + Ptpn14 protein_coding processed_transcript MGP_BALBcJ_T0005937.1 MGP_BALBcJ_G0004977.1 mouse_genomes_project 1 159827028 159829160 + Gm37083 lincRNA lincRNA MGP_BALBcJ_T0000421.1 MGP_BALBcJ_G0000360.1 mouse_genomes_project 1 29720325 29726320 + TEC TEC MGP_BALBcJ_T0000392.1 MGP_BALBcJ_G0000333.1 mouse_genomes_project 1 18982313 18983920 - TEC TEC MGP_BALBcJ_T0021577.1 MGP_BALBcJ_G0016320.1 mouse_genomes_project 1 105890293 105903290 + MGP_BALBcJ_P0021577 Serpinb11 protein_coding protein_coding MGP_BALBcJ_T0021578.1 MGP_BALBcJ_G0016320.1 mouse_genomes_project 1 105891024 105909567 + MGP_BALBcJ_P0021578 Serpinb11 protein_coding protein_coding MGP_BALBcJ_T0016984.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133914433 133915373 - Ptprv processed_transcript retained_intron MGP_BALBcJ_T0016985.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133914434 133939299 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0016986.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133914436 133915245 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0016987.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133914565 133915526 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0016988.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133915952 133916401 - Ptprv processed_transcript retained_intron MGP_BALBcJ_T0016989.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133916211 133917477 - Ptprv processed_transcript retained_intron MGP_BALBcJ_T0016990.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133917105 133918694 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0016991.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133933148 133939273 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0016992.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133933166 133935053 - Ptprv processed_transcript retained_intron MGP_BALBcJ_T0016993.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133936262 133937868 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0016994.1 MGP_BALBcJ_G0015048.1 mouse_genomes_project 1 133936371 133939248 - Ptprv processed_transcript processed_transcript MGP_BALBcJ_T0021899.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129935363 + Eif2d protein_coding retained_intron MGP_BALBcJ_T0021900.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129951003 + MGP_BALBcJ_P0021900 Eif2d protein_coding protein_coding MGP_BALBcJ_T0021901.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129957145 + MGP_BALBcJ_P0021901 Eif2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021902.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129949764 + MGP_BALBcJ_P0021902 Eif2d protein_coding protein_coding MGP_BALBcJ_T0021903.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129957559 + MGP_BALBcJ_P0021903 Eif2d protein_coding protein_coding MGP_BALBcJ_T0021904.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129964811 + MGP_BALBcJ_P0021904 Eif2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021905.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129930520 129952377 + MGP_BALBcJ_P0021905 Eif2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021906.1 MGP_BALBcJ_G0016393.1 mouse_genomes_project 1 129943904 129949035 + Eif2d protein_coding processed_transcript MGP_BALBcJ_T0099138.1 MGP_BALBcJ_G0037174.1 mouse_genomes_project 1 150859216 150859349 - Gm25279 snRNA snRNA MGP_BALBcJ_T0022893.1 MGP_BALBcJ_G0016586.1 mouse_genomes_project 1 159931964 160001157 + MGP_BALBcJ_P0022893 Rc3h1 protein_coding protein_coding MGP_BALBcJ_T0022894.1 MGP_BALBcJ_G0016586.1 mouse_genomes_project 1 159955734 159993988 + MGP_BALBcJ_P0022894 Rc3h1 protein_coding protein_coding MGP_BALBcJ_T0022895.1 MGP_BALBcJ_G0016586.1 mouse_genomes_project 1 159977108 159978267 + Rc3h1 protein_coding retained_intron MGP_BALBcJ_T0100390.1 MGP_BALBcJ_G0038426.1 mouse_genomes_project 1 159008429 159008539 - Gm24719 snoRNA snoRNA MGP_BALBcJ_T0020865.1 MGP_BALBcJ_G0016163.1 mouse_genomes_project 1 81373390 81526741 - MGP_BALBcJ_P0020865 Sphkap protein_coding protein_coding MGP_BALBcJ_T0020866.1 MGP_BALBcJ_G0016163.1 mouse_genomes_project 1 81374689 81526548 - MGP_BALBcJ_P0020866 Sphkap protein_coding unknown_likely_coding MGP_BALBcJ_T0020867.1 MGP_BALBcJ_G0016163.1 mouse_genomes_project 1 81374693 81398770 - MGP_BALBcJ_P0020867 Sphkap protein_coding protein_coding MGP_BALBcJ_T0020868.1 MGP_BALBcJ_G0016163.1 mouse_genomes_project 1 81384731 81526706 - Sphkap protein_coding retained_intron MGP_BALBcJ_T0020869.1 MGP_BALBcJ_G0016163.1 mouse_genomes_project 1 81463773 81526680 - Sphkap protein_coding retained_intron MGP_BALBcJ_T0020870.1 MGP_BALBcJ_G0016163.1 mouse_genomes_project 1 81502287 81526706 - Sphkap protein_coding retained_intron MGP_BALBcJ_T0019735.1 MGP_BALBcJ_G0015954.1 mouse_genomes_project 1 50742221 50773395 - MGP_BALBcJ_P0019735 1700019A02Rik protein_coding protein_coding MGP_BALBcJ_T0019736.1 MGP_BALBcJ_G0015954.1 mouse_genomes_project 1 50742244 50773367 - MGP_BALBcJ_P0019736 1700019A02Rik protein_coding protein_coding MGP_BALBcJ_T0012041.1 MGP_BALBcJ_G0010138.1 mouse_genomes_project 1 58906900 58907136 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099124.1 MGP_BALBcJ_G0037160.1 mouse_genomes_project 1 130865234 130865350 + Gm26034 snRNA snRNA MGP_BALBcJ_T0005942.1 MGP_BALBcJ_G0004981.1 mouse_genomes_project 1 162617691 162620566 + Gm29500 lincRNA lincRNA MGP_BALBcJ_T0100315.1 MGP_BALBcJ_G0038351.1 mouse_genomes_project 1 6996727 6996814 - Snord87 snoRNA snoRNA MGP_BALBcJ_T0000803.1 MGP_BALBcJ_G0000736.1 mouse_genomes_project 1 194651827 194654049 - TEC TEC MGP_BALBcJ_T0024005.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184328273 184360058 - MGP_BALBcJ_P0024005 Marc2 protein_coding protein_coding MGP_BALBcJ_T0024006.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184328883 184341661 - Marc2 protein_coding processed_transcript MGP_BALBcJ_T0024007.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184328887 184336821 - Marc2 protein_coding retained_intron MGP_BALBcJ_T0024008.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184328897 184341446 - Marc2 protein_coding processed_transcript MGP_BALBcJ_T0024009.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184328899 184333239 - Marc2 protein_coding retained_intron MGP_BALBcJ_T0024010.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184328965 184341436 - Marc2 protein_coding processed_transcript MGP_BALBcJ_T0024011.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184333031 184359985 - Marc2 protein_coding processed_transcript MGP_BALBcJ_T0024012.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184336170 184360628 - MGP_BALBcJ_P0024012 Marc2 protein_coding protein_coding MGP_BALBcJ_T0024013.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184341963 184359748 - Marc2 protein_coding processed_transcript MGP_BALBcJ_T0024014.1 MGP_BALBcJ_G0016847.1 mouse_genomes_project 1 184343118 184360024 - Marc2 protein_coding retained_intron MGP_BALBcJ_T0000429.1 MGP_BALBcJ_G0000367.1 mouse_genomes_project 1 30911513 30913814 - TEC TEC MGP_BALBcJ_T0022132.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132979041 132987117 + MGP_BALBcJ_P0022132 Chil1 protein_coding protein_coding MGP_BALBcJ_T0022133.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132979269 132987110 + MGP_BALBcJ_P0022133 Chil1 protein_coding protein_coding MGP_BALBcJ_T0022134.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132979269 132987262 + MGP_BALBcJ_P0022134 Chil1 protein_coding protein_coding MGP_BALBcJ_T0022135.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132979339 132983632 + MGP_BALBcJ_P0022135 Chil1 protein_coding protein_coding MGP_BALBcJ_T0022136.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132979346 132983642 + MGP_BALBcJ_P0022136 Chil1 protein_coding protein_coding MGP_BALBcJ_T0022137.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132979347 132983919 + Chil1 protein_coding retained_intron MGP_BALBcJ_T0022138.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132980666 132983701 + Chil1 protein_coding retained_intron MGP_BALBcJ_T0022139.1 MGP_BALBcJ_G0016442.1 mouse_genomes_project 1 132986206 132987108 + Chil1 protein_coding retained_intron MGP_BALBcJ_T0000413.1 MGP_BALBcJ_G0000352.1 mouse_genomes_project 1 22964923 22968542 - TEC TEC MGP_BALBcJ_T0012282.1 MGP_BALBcJ_G0010379.1 mouse_genomes_project 1 160797924 160799463 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102102.1 MGP_BALBcJ_G0039919.1 mouse_genomes_project 1 173435151 173436531 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009465.1 MGP_BALBcJ_G0007590.1 mouse_genomes_project 1 58569985 58570091 - Gm23762 miRNA miRNA MGP_BALBcJ_T0020469.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72609190 72632092 - MGP_BALBcJ_P0020469 Zfp142 protein_coding protein_coding MGP_BALBcJ_T0020470.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72610489 72632089 - MGP_BALBcJ_P0020470 Zfp142 protein_coding protein_coding MGP_BALBcJ_T0020471.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72610565 72632209 - MGP_BALBcJ_P0020471 Zfp142 protein_coding protein_coding MGP_BALBcJ_T0020472.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72610746 72632310 - MGP_BALBcJ_P0020472 Zfp142 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020473.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72610932 72629727 - MGP_BALBcJ_P0020473 Zfp142 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020474.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72626288 72632259 - Zfp142 protein_coding retained_intron MGP_BALBcJ_T0020475.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72626295 72632016 - Zfp142 protein_coding retained_intron MGP_BALBcJ_T0020476.1 MGP_BALBcJ_G0016093.1 mouse_genomes_project 1 72629648 72632197 - Zfp142 protein_coding processed_transcript MGP_BALBcJ_T0000417.1 MGP_BALBcJ_G0000356.1 mouse_genomes_project 1 22998589 22999811 + TEC TEC MGP_BALBcJ_T0000705.1 MGP_BALBcJ_G0000641.1 mouse_genomes_project 1 159639137 159642637 - TEC TEC MGP_BALBcJ_T0020090.1 MGP_BALBcJ_G0016017.1 mouse_genomes_project 1 58675761 58714839 + Cd28 protein_coding processed_transcript MGP_BALBcJ_T0020091.1 MGP_BALBcJ_G0016017.1 mouse_genomes_project 1 58697979 58725006 + MGP_BALBcJ_P0020091 Cd28 protein_coding protein_coding MGP_BALBcJ_T0020092.1 MGP_BALBcJ_G0016017.1 mouse_genomes_project 1 58698023 58716301 + Cd28 protein_coding retained_intron MGP_BALBcJ_T0002936.1 MGP_BALBcJ_G0002758.1 mouse_genomes_project 1 171204549 171207312 - Gm37756 antisense antisense MGP_BALBcJ_T0021729.1 MGP_BALBcJ_G0016354.1 mouse_genomes_project 1 120160167 120178740 - MGP_BALBcJ_P0021729 Htr5b protein_coding protein_coding MGP_BALBcJ_T0019478.1 MGP_BALBcJ_G0015904.1 mouse_genomes_project 1 37664450 37669282 + protein_coding retained_intron MGP_BALBcJ_T0019479.1 MGP_BALBcJ_G0015904.1 mouse_genomes_project 1 37665451 37669012 + MGP_BALBcJ_P0019479 protein_coding protein_coding MGP_BALBcJ_T0019480.1 MGP_BALBcJ_G0015904.1 mouse_genomes_project 1 37665745 37708969 + MGP_BALBcJ_P0019480 protein_coding unknown_likely_coding MGP_BALBcJ_T0023684.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176033975 176107774 - MGP_BALBcJ_P0023684 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023685.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176033984 176056289 - MGP_BALBcJ_P0023685 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023686.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176033984 176114674 - MGP_BALBcJ_P0023686 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023687.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176033985 176094327 - MGP_BALBcJ_P0023687 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023688.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176034423 176051545 - Cep170 protein_coding retained_intron MGP_BALBcJ_T0023689.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176034461 176057472 - MGP_BALBcJ_P0023689 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023690.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176034663 176094337 - MGP_BALBcJ_P0023690 Cep170 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023691.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176035472 176051194 - MGP_BALBcJ_P0023691 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023692.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176035910 176055353 - Cep170 protein_coding processed_transcript MGP_BALBcJ_T0023693.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176040805 176043428 - Cep170 protein_coding retained_intron MGP_BALBcJ_T0023694.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176073673 176078990 - Cep170 protein_coding retained_intron MGP_BALBcJ_T0023695.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176075432 176083000 - MGP_BALBcJ_P0023695 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023696.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176079124 176114674 - MGP_BALBcJ_P0023696 Cep170 protein_coding protein_coding MGP_BALBcJ_T0023697.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176089088 176107780 - Cep170 protein_coding retained_intron MGP_BALBcJ_T0023698.1 MGP_BALBcJ_G0016781.1 mouse_genomes_project 1 176089165 176107774 - MGP_BALBcJ_P0023698 Cep170 protein_coding protein_coding MGP_BALBcJ_T0000447.1 MGP_BALBcJ_G0000385.1 mouse_genomes_project 1 36305373 36307012 + TEC TEC MGP_BALBcJ_T0019019.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18530697 19125197 - MGP_BALBcJ_P0019019 Kcnq5 protein_coding protein_coding MGP_BALBcJ_T0019020.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18530702 19125558 - MGP_BALBcJ_P0019020 Kcnq5 protein_coding protein_coding MGP_BALBcJ_T0019021.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18534449 19125197 - MGP_BALBcJ_P0019021 Kcnq5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019022.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18534449 19125197 - MGP_BALBcJ_P0019022 Kcnq5 protein_coding protein_coding MGP_BALBcJ_T0019023.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18534449 19125197 - MGP_BALBcJ_P0019023 Kcnq5 protein_coding protein_coding MGP_BALBcJ_T0019024.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18602000 19125281 - Kcnq5 protein_coding retained_intron MGP_BALBcJ_T0019025.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18645191 18746723 - MGP_BALBcJ_P0019025 Kcnq5 protein_coding unknown_likely_coding MGP_BALBcJ_T0019026.1 MGP_BALBcJ_G0015818.1 mouse_genomes_project 1 18723907 19002269 - Kcnq5 protein_coding processed_transcript MGP_BALBcJ_T0000760.1 MGP_BALBcJ_G0000695.1 mouse_genomes_project 1 179972887 179976620 - TEC TEC MGP_BALBcJ_T0011904.1 MGP_BALBcJ_G0010001.1 mouse_genomes_project 1 19188578 19189130 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011978.1 MGP_BALBcJ_G0010075.1 mouse_genomes_project 1 42162742 42163185 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002929.1 MGP_BALBcJ_G0002753.1 mouse_genomes_project 1 169215626 169217189 + 4930500M09Rik antisense antisense MGP_BALBcJ_T0002930.1 MGP_BALBcJ_G0002753.1 mouse_genomes_project 1 169215626 169216323 + 4930500M09Rik antisense antisense MGP_BALBcJ_T0024253.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192714536 192724319 + MGP_BALBcJ_P0024253 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024255.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192719959 192722790 + MGP_BALBcJ_P0024255 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024256.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192719983 192721323 + MGP_BALBcJ_P0024256 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024257.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192720068 192724319 + MGP_BALBcJ_P0024257 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024258.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192720071 192722792 + MGP_BALBcJ_P0024258 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024259.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192720071 192720918 + MGP_BALBcJ_P0024259 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024260.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192720077 192721044 + MGP_BALBcJ_P0024260 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0024261.1 MGP_BALBcJ_G0016896.1 mouse_genomes_project 1 192720235 192721087 + MGP_BALBcJ_P0024261 A130010J15Rik protein_coding protein_coding MGP_BALBcJ_T0023863.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180456178 180465783 + MGP_BALBcJ_P0023863 Tmem63a protein_coding protein_coding MGP_BALBcJ_T0023864.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180456292 180468483 + MGP_BALBcJ_P0023864 Tmem63a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023865.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180456293 180489517 + MGP_BALBcJ_P0023865 Tmem63a protein_coding protein_coding MGP_BALBcJ_T0023866.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180456408 180470358 + MGP_BALBcJ_P0023866 Tmem63a protein_coding protein_coding MGP_BALBcJ_T0023867.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180457869 180489508 + MGP_BALBcJ_P0023867 Tmem63a protein_coding protein_coding MGP_BALBcJ_T0023868.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180459740 180460549 + MGP_BALBcJ_P0023868 Tmem63a protein_coding protein_coding MGP_BALBcJ_T0023869.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180459796 180462673 + MGP_BALBcJ_P0023869 Tmem63a protein_coding protein_coding MGP_BALBcJ_T0023870.1 MGP_BALBcJ_G0016816.1 mouse_genomes_project 1 180474499 180475274 + Tmem63a protein_coding retained_intron MGP_BALBcJ_T0023729.1 MGP_BALBcJ_G0016790.1 mouse_genomes_project 1 177817091 177831746 - MGP_BALBcJ_P0023729 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023730.1 MGP_BALBcJ_G0016790.1 mouse_genomes_project 1 177817151 177824639 - MGP_BALBcJ_P0023730 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023731.1 MGP_BALBcJ_G0016790.1 mouse_genomes_project 1 177817637 177823425 - MGP_BALBcJ_P0023731 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100368.1 MGP_BALBcJ_G0038404.1 mouse_genomes_project 1 101671240 101671382 - Gm23965 snoRNA snoRNA MGP_BALBcJ_T0000377.1 MGP_BALBcJ_G0000318.1 mouse_genomes_project 1 10387310 10389560 - TEC TEC MGP_BALBcJ_T0020879.1 MGP_BALBcJ_G0016165.1 mouse_genomes_project 1 82473775 82793714 - MGP_BALBcJ_P0020879 Dner protein_coding protein_coding MGP_BALBcJ_T0020880.1 MGP_BALBcJ_G0016165.1 mouse_genomes_project 1 82633317 82793512 - Dner protein_coding retained_intron MGP_BALBcJ_T0020881.1 MGP_BALBcJ_G0016165.1 mouse_genomes_project 1 82671059 82734805 - MGP_BALBcJ_P0020881 Dner protein_coding protein_coding MGP_BALBcJ_T0020882.1 MGP_BALBcJ_G0016165.1 mouse_genomes_project 1 82673348 82718183 - MGP_BALBcJ_P0020882 Dner protein_coding protein_coding MGP_BALBcJ_T0005671.1 MGP_BALBcJ_G0004775.1 mouse_genomes_project 1 39599342 39600725 + Gm9915 lincRNA lincRNA MGP_BALBcJ_T0005672.1 MGP_BALBcJ_G0004775.1 mouse_genomes_project 1 39599343 39600725 + Gm9915 lincRNA lincRNA MGP_BALBcJ_T0002958.1 MGP_BALBcJ_G0002777.1 mouse_genomes_project 1 186260445 186261786 + Gm29491 antisense antisense MGP_BALBcJ_T0022301.1 MGP_BALBcJ_G0016476.1 mouse_genomes_project 1 134837764 134870696 + MGP_BALBcJ_P0022301 Tmem9 protein_coding protein_coding MGP_BALBcJ_T0022302.1 MGP_BALBcJ_G0016476.1 mouse_genomes_project 1 134849749 134871771 + MGP_BALBcJ_P0022302 Tmem9 protein_coding protein_coding MGP_BALBcJ_T0022303.1 MGP_BALBcJ_G0016476.1 mouse_genomes_project 1 134849844 134870721 + MGP_BALBcJ_P0022303 Tmem9 protein_coding protein_coding MGP_BALBcJ_T0022304.1 MGP_BALBcJ_G0016476.1 mouse_genomes_project 1 134863420 134870828 + Tmem9 protein_coding retained_intron MGP_BALBcJ_T0022305.1 MGP_BALBcJ_G0016476.1 mouse_genomes_project 1 134869682 134871209 + Tmem9 protein_coding processed_transcript MGP_BALBcJ_T0000738.1 MGP_BALBcJ_G0000674.1 mouse_genomes_project 1 175338000 175339644 - TEC TEC MGP_BALBcJ_T0000503.1 MGP_BALBcJ_G0000441.1 mouse_genomes_project 1 66695726 66698099 - TEC TEC MGP_BALBcJ_T0023997.1 MGP_BALBcJ_G0016843.1 mouse_genomes_project 1 183501129 183527045 + MGP_BALBcJ_P0023997 Dusp10 protein_coding protein_coding MGP_BALBcJ_T0024000.1 MGP_BALBcJ_G0016843.1 mouse_genomes_project 1 183524155 183566862 + MGP_BALBcJ_P0024000 Dusp10 protein_coding protein_coding MGP_BALBcJ_T0002763.1 MGP_BALBcJ_G0002627.1 mouse_genomes_project 1 35227523 35251193 + Gm15457 antisense antisense MGP_BALBcJ_T0012287.1 MGP_BALBcJ_G0010384.1 mouse_genomes_project 1 163042637 163043026 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012093.1 MGP_BALBcJ_G0010190.1 mouse_genomes_project 1 80874495 80874678 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005878.1 MGP_BALBcJ_G0004931.1 mouse_genomes_project 1 131118522 131125821 + F730311O21Rik lincRNA lincRNA MGP_BALBcJ_T0099079.1 MGP_BALBcJ_G0037115.1 mouse_genomes_project 1 30438592 30438702 + Gm24901 snRNA snRNA MGP_BALBcJ_T0102048.1 MGP_BALBcJ_G0039865.1 mouse_genomes_project 1 18381183 18385055 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002836.1 MGP_BALBcJ_G0002683.1 mouse_genomes_project 1 91225623 91232558 - Gm29480 antisense antisense MGP_BALBcJ_T0020396.1 MGP_BALBcJ_G0016079.1 mouse_genomes_project 1 72189255 72197097 + MGP_BALBcJ_P0020396 Cxcr2 protein_coding protein_coding MGP_BALBcJ_T0020397.1 MGP_BALBcJ_G0016079.1 mouse_genomes_project 1 72189257 72197733 + MGP_BALBcJ_P0020397 Cxcr2 protein_coding protein_coding MGP_BALBcJ_T0000514.1 MGP_BALBcJ_G0000452.1 mouse_genomes_project 1 73455246 73457438 - TEC TEC MGP_BALBcJ_T0006008.1 MGP_BALBcJ_G0005031.1 mouse_genomes_project 1 184220356 184226845 + 4930488B22Rik lincRNA lincRNA MGP_BALBcJ_T0000575.1 MGP_BALBcJ_G0000513.1 mouse_genomes_project 1 104676945 104681898 + TEC TEC MGP_BALBcJ_T0011835.1 MGP_BALBcJ_G0009932.1 mouse_genomes_project 1 1777697 1778328 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009472.1 MGP_BALBcJ_G0007597.1 mouse_genomes_project 1 65606676 65606754 + Gm22548 miRNA miRNA MGP_BALBcJ_T0098789.1 MGP_BALBcJ_G0036843.1 mouse_genomes_project 1 67590880 67594367 - Gm29112 sense_intronic sense_intronic MGP_BALBcJ_T0099036.1 MGP_BALBcJ_G0037077.1 mouse_genomes_project 1 20183063 20367670 - Gm29506 sense_overlapping sense_overlapping MGP_BALBcJ_T0000635.1 MGP_BALBcJ_G0000572.1 mouse_genomes_project 1 134893534 134895787 + TEC TEC MGP_BALBcJ_T0016944.1 MGP_BALBcJ_G0015030.1 mouse_genomes_project 1 36870955 36875875 - Gm15832 processed_transcript processed_transcript MGP_BALBcJ_T0000581.1 MGP_BALBcJ_G0000519.1 mouse_genomes_project 1 118265898 118266824 - TEC TEC MGP_BALBcJ_T0012224.1 MGP_BALBcJ_G0010321.1 mouse_genomes_project 1 137223189 137223340 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020138.1 MGP_BALBcJ_G0016025.1 mouse_genomes_project 1 61169239 61202084 - MGP_BALBcJ_P0020138 Gpr1 protein_coding protein_coding MGP_BALBcJ_T0020139.1 MGP_BALBcJ_G0016025.1 mouse_genomes_project 1 61196281 61201764 - Gpr1 protein_coding processed_transcript MGP_BALBcJ_T0000757.1 MGP_BALBcJ_G0000692.1 mouse_genomes_project 1 179855295 179862659 + TEC TEC MGP_BALBcJ_T0021293.1 MGP_BALBcJ_G0016253.1 mouse_genomes_project 1 90868065 90869105 - MGP_BALBcJ_P0021293 Olfr1416 protein_coding protein_coding MGP_BALBcJ_T0021294.1 MGP_BALBcJ_G0016253.1 mouse_genomes_project 1 90868065 90873497 - MGP_BALBcJ_P0021294 Olfr1416 protein_coding protein_coding MGP_BALBcJ_T0000593.1 MGP_BALBcJ_G0000531.1 mouse_genomes_project 1 122153907 122155400 - TEC TEC MGP_BALBcJ_T0099149.1 MGP_BALBcJ_G0037185.1 mouse_genomes_project 1 171959175 171959272 - Gm24817 snRNA snRNA MGP_BALBcJ_T0019496.1 MGP_BALBcJ_G0015908.1 mouse_genomes_project 1 37925329 37975747 + MGP_BALBcJ_P0019496 Slc9a4 protein_coding protein_coding MGP_BALBcJ_T0019497.1 MGP_BALBcJ_G0015908.1 mouse_genomes_project 1 37925452 37930673 + Slc9a4 protein_coding processed_transcript MGP_BALBcJ_T0019498.1 MGP_BALBcJ_G0015908.1 mouse_genomes_project 1 37945531 37947833 + Slc9a4 protein_coding processed_transcript MGP_BALBcJ_T0019499.1 MGP_BALBcJ_G0015908.1 mouse_genomes_project 1 37973989 37975438 + Slc9a4 protein_coding retained_intron MGP_BALBcJ_T0011983.1 MGP_BALBcJ_G0010080.1 mouse_genomes_project 1 42829451 42830760 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023461.1 MGP_BALBcJ_G0016711.1 mouse_genomes_project 1 170963145 170989087 + Cd84 protein_coding processed_transcript MGP_BALBcJ_T0023462.1 MGP_BALBcJ_G0016711.1 mouse_genomes_project 1 170963987 170978548 + MGP_BALBcJ_P0023462 Cd84 protein_coding protein_coding MGP_BALBcJ_T0023463.1 MGP_BALBcJ_G0016711.1 mouse_genomes_project 1 170964055 171002425 + MGP_BALBcJ_P0023463 Cd84 protein_coding protein_coding MGP_BALBcJ_T0011913.1 MGP_BALBcJ_G0010010.1 mouse_genomes_project 1 22384454 22384897 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009530.1 MGP_BALBcJ_G0007655.1 mouse_genomes_project 1 176073283 176073382 - Mir350 miRNA miRNA MGP_BALBcJ_T0012091.1 MGP_BALBcJ_G0010188.1 mouse_genomes_project 1 79780355 79781340 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012012.1 MGP_BALBcJ_G0010109.1 mouse_genomes_project 1 50093121 50094121 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100406.1 MGP_BALBcJ_G0038442.1 mouse_genomes_project 1 164573988 164574115 - Gm23208 snoRNA snoRNA MGP_BALBcJ_T0012074.1 MGP_BALBcJ_G0010171.1 mouse_genomes_project 1 69727863 69728740 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024300.1 MGP_BALBcJ_G0016903.1 mouse_genomes_project 1 194511626 194534105 + MGP_BALBcJ_P0024300 Cd34 protein_coding protein_coding MGP_BALBcJ_T0024301.1 MGP_BALBcJ_G0016903.1 mouse_genomes_project 1 194511682 194534105 + MGP_BALBcJ_P0024301 Cd34 protein_coding protein_coding MGP_BALBcJ_T0024302.1 MGP_BALBcJ_G0016903.1 mouse_genomes_project 1 194511712 194523587 + Cd34 protein_coding retained_intron MGP_BALBcJ_T0024303.1 MGP_BALBcJ_G0016903.1 mouse_genomes_project 1 194511758 194514037 + Cd34 protein_coding retained_intron MGP_BALBcJ_T0024304.1 MGP_BALBcJ_G0016903.1 mouse_genomes_project 1 194511802 194531376 + MGP_BALBcJ_P0024304 Cd34 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009462.1 MGP_BALBcJ_G0007587.1 mouse_genomes_project 1 51085356 51085480 - Gm25240 miRNA miRNA MGP_BALBcJ_T0023517.1 MGP_BALBcJ_G0016721.1 mouse_genomes_project 1 171324882 171334829 - MGP_BALBcJ_P0023517 Casq1 protein_coding protein_coding MGP_BALBcJ_T0023518.1 MGP_BALBcJ_G0016721.1 mouse_genomes_project 1 171324883 171328943 - Casq1 protein_coding retained_intron MGP_BALBcJ_T0023519.1 MGP_BALBcJ_G0016721.1 mouse_genomes_project 1 171330128 171334676 - MGP_BALBcJ_P0023519 Casq1 protein_coding protein_coding MGP_BALBcJ_T0024018.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184715957 184790751 + MGP_BALBcJ_P0024018 Rab3gap2 protein_coding protein_coding MGP_BALBcJ_T0024019.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184715957 184793325 + MGP_BALBcJ_P0024019 Rab3gap2 protein_coding protein_coding MGP_BALBcJ_T0024020.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184716018 184718285 + Rab3gap2 protein_coding retained_intron MGP_BALBcJ_T0024021.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184716082 184791205 + MGP_BALBcJ_P0024021 Rab3gap2 protein_coding unknown_likely_coding MGP_BALBcJ_T0024022.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184776186 184793310 + Rab3gap2 protein_coding retained_intron MGP_BALBcJ_T0024023.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184776349 184791289 + Rab3gap2 protein_coding retained_intron MGP_BALBcJ_T0024024.1 MGP_BALBcJ_G0016850.1 mouse_genomes_project 1 184784360 184788261 + Rab3gap2 protein_coding retained_intron MGP_BALBcJ_T0009529.1 MGP_BALBcJ_G0007654.1 mouse_genomes_project 1 170752261 170752322 - Mir7683 miRNA miRNA MGP_BALBcJ_T0005968.1 MGP_BALBcJ_G0005003.1 mouse_genomes_project 1 170388678 170394222 - Gm20045 lincRNA lincRNA MGP_BALBcJ_T0000553.1 MGP_BALBcJ_G0000491.1 mouse_genomes_project 1 88181293 88183316 + TEC TEC MGP_BALBcJ_T0016999.1 MGP_BALBcJ_G0015050.1 mouse_genomes_project 1 135250633 135254237 - 9230116N13Rik processed_transcript antisense MGP_BALBcJ_T0017000.1 MGP_BALBcJ_G0015050.1 mouse_genomes_project 1 135251560 135254212 - 9230116N13Rik processed_transcript retained_intron MGP_BALBcJ_T0023032.1 MGP_BALBcJ_G0016609.1 mouse_genomes_project 1 161932933 161958838 - MGP_BALBcJ_P0023032 Fmo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023033.1 MGP_BALBcJ_G0016609.1 mouse_genomes_project 1 161933105 161958541 - MGP_BALBcJ_P0023033 Fmo6 protein_coding protein_coding MGP_BALBcJ_T0020936.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84137187 84145041 + Spata3 protein_coding processed_transcript MGP_BALBcJ_T0020937.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84139064 84149620 + Spata3 protein_coding processed_transcript MGP_BALBcJ_T0020938.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142313 84150330 + MGP_BALBcJ_P0020938 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020939.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142314 84145038 + MGP_BALBcJ_P0020939 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020940.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142317 84145040 + MGP_BALBcJ_P0020940 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020941.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142317 84150330 + MGP_BALBcJ_P0020941 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020942.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142317 84147550 + MGP_BALBcJ_P0020942 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020943.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142324 84150293 + MGP_BALBcJ_P0020943 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020944.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142331 84149634 + MGP_BALBcJ_P0020944 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020945.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142332 84145041 + MGP_BALBcJ_P0020945 Spata3 protein_coding protein_coding MGP_BALBcJ_T0020946.1 MGP_BALBcJ_G0016177.1 mouse_genomes_project 1 84142476 84149636 + MGP_BALBcJ_P0020946 Spata3 protein_coding protein_coding MGP_BALBcJ_T0101598.1 MGP_BALBcJ_G0039622.1 mouse_genomes_project 1 182735434 182736102 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0005693.1 MGP_BALBcJ_G0004785.1 mouse_genomes_project 1 44719738 44754914 + Gm28826 lincRNA lincRNA MGP_BALBcJ_T0020527.1 MGP_BALBcJ_G0016105.1 mouse_genomes_project 1 72946323 72980515 - MGP_BALBcJ_P0020527 Ccdc108 protein_coding protein_coding MGP_BALBcJ_T0020528.1 MGP_BALBcJ_G0016105.1 mouse_genomes_project 1 72967259 72980510 - Ccdc108 protein_coding retained_intron MGP_BALBcJ_T0020529.1 MGP_BALBcJ_G0016105.1 mouse_genomes_project 1 72968348 72980508 - Ccdc108 protein_coding retained_intron MGP_BALBcJ_T0006016.1 MGP_BALBcJ_G0005039.1 mouse_genomes_project 1 186066752 186113680 - A730004F24Rik lincRNA lincRNA MGP_BALBcJ_T0006017.1 MGP_BALBcJ_G0005039.1 mouse_genomes_project 1 186066796 186113889 - A730004F24Rik lincRNA lincRNA MGP_BALBcJ_T0017048.1 MGP_BALBcJ_G0015064.1 mouse_genomes_project 1 176768268 176770480 + Gm29856 processed_transcript processed_transcript MGP_BALBcJ_T0017049.1 MGP_BALBcJ_G0015064.1 mouse_genomes_project 1 176769458 176770481 + Gm29856 processed_transcript processed_transcript MGP_BALBcJ_T0012184.1 MGP_BALBcJ_G0010281.1 mouse_genomes_project 1 118426813 118427523 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000692.1 MGP_BALBcJ_G0000628.1 mouse_genomes_project 1 156382778 156385192 - TEC TEC MGP_BALBcJ_T0009460.1 MGP_BALBcJ_G0007585.1 mouse_genomes_project 1 45035097 45035202 - Mir6350 miRNA miRNA MGP_BALBcJ_T0019648.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49343862 49508588 - MGP_BALBcJ_P0019648 Myo1b protein_coding protein_coding MGP_BALBcJ_T0019649.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49344079 49508458 - MGP_BALBcJ_P0019649 Myo1b protein_coding protein_coding MGP_BALBcJ_T0019650.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49344086 49499820 - MGP_BALBcJ_P0019650 Myo1b protein_coding protein_coding MGP_BALBcJ_T0019651.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49344091 49508445 - MGP_BALBcJ_P0019651 Myo1b protein_coding protein_coding MGP_BALBcJ_T0019652.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49354461 49358582 - Myo1b protein_coding retained_intron MGP_BALBcJ_T0019653.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49356633 49365024 - Myo1b protein_coding processed_transcript MGP_BALBcJ_T0019654.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49356701 49361503 - Myo1b protein_coding retained_intron MGP_BALBcJ_T0019655.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49360987 49370497 - Myo1b protein_coding processed_transcript MGP_BALBcJ_T0019656.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49370453 49389292 - Myo1b protein_coding processed_transcript MGP_BALBcJ_T0019657.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49373784 49376272 - Myo1b protein_coding retained_intron MGP_BALBcJ_T0019658.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49391469 49488711 - MGP_BALBcJ_P0019658 Myo1b protein_coding protein_coding MGP_BALBcJ_T0019659.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49393849 49415139 - Myo1b protein_coding processed_transcript MGP_BALBcJ_T0019660.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49405403 49508429 - Myo1b protein_coding retained_intron MGP_BALBcJ_T0019661.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49429022 49445651 - Myo1b protein_coding processed_transcript MGP_BALBcJ_T0019662.1 MGP_BALBcJ_G0015943.1 mouse_genomes_project 1 49457846 49508438 - Myo1b protein_coding retained_intron MGP_BALBcJ_T0100317.1 MGP_BALBcJ_G0038353.1 mouse_genomes_project 1 8187285 8187413 - Gm24173 snoRNA snoRNA MGP_BALBcJ_T0018703.1 MGP_BALBcJ_G0015754.1 mouse_genomes_project 1 2611342 2614184 + Oprk1 protein_coding retained_intron MGP_BALBcJ_T0018704.1 MGP_BALBcJ_G0015754.1 mouse_genomes_project 1 2611369 2630627 + MGP_BALBcJ_P0018704 Oprk1 protein_coding protein_coding MGP_BALBcJ_T0018705.1 MGP_BALBcJ_G0015754.1 mouse_genomes_project 1 2611433 2627362 + MGP_BALBcJ_P0018705 Oprk1 protein_coding protein_coding MGP_BALBcJ_T0018706.1 MGP_BALBcJ_G0015754.1 mouse_genomes_project 1 2611817 2628510 + MGP_BALBcJ_P0018706 Oprk1 protein_coding protein_coding MGP_BALBcJ_T0018707.1 MGP_BALBcJ_G0015754.1 mouse_genomes_project 1 2621005 2627649 + Oprk1 protein_coding retained_intron MGP_BALBcJ_T0011923.1 MGP_BALBcJ_G0010020.1 mouse_genomes_project 1 26490929 26491479 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099157.1 MGP_BALBcJ_G0037193.1 mouse_genomes_project 1 184082015 184082113 - Gm23349 snRNA snRNA MGP_BALBcJ_T0011224.1 MGP_BALBcJ_G0009349.1 mouse_genomes_project 1 57559090 57559175 + Gm24545 misc_RNA misc_RNA MGP_BALBcJ_T0000754.1 MGP_BALBcJ_G0000689.1 mouse_genomes_project 1 177833586 177835456 + TEC TEC MGP_BALBcJ_T0021307.1 MGP_BALBcJ_G0016261.1 mouse_genomes_project 1 91019992 91022757 - protein_coding retained_intron MGP_BALBcJ_T0021308.1 MGP_BALBcJ_G0016261.1 mouse_genomes_project 1 91019992 91024771 - MGP_BALBcJ_P0021308 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021309.1 MGP_BALBcJ_G0016261.1 mouse_genomes_project 1 91019992 91024833 - MGP_BALBcJ_P0021309 protein_coding protein_coding MGP_BALBcJ_T0021310.1 MGP_BALBcJ_G0016261.1 mouse_genomes_project 1 91019992 91023412 - MGP_BALBcJ_P0021310 protein_coding protein_coding MGP_BALBcJ_T0021311.1 MGP_BALBcJ_G0016261.1 mouse_genomes_project 1 91022217 91024833 - protein_coding retained_intron MGP_BALBcJ_T0099153.1 MGP_BALBcJ_G0037189.1 mouse_genomes_project 1 177884330 177884436 + Gm24919 snRNA snRNA MGP_BALBcJ_T0005725.1 MGP_BALBcJ_G0004810.1 mouse_genomes_project 1 59407178 59440435 + Gm11588 lincRNA lincRNA MGP_BALBcJ_T0100379.1 MGP_BALBcJ_G0038415.1 mouse_genomes_project 1 131596912 131597033 - Gm22609 snoRNA snoRNA MGP_BALBcJ_T0100400.1 MGP_BALBcJ_G0038436.1 mouse_genomes_project 1 160062710 160062787 + Snord80 snoRNA snoRNA MGP_BALBcJ_T0023553.1 MGP_BALBcJ_G0016730.1 mouse_genomes_project 1 171616399 171622491 + Tagln2 protein_coding retained_intron MGP_BALBcJ_T0023554.1 MGP_BALBcJ_G0016730.1 mouse_genomes_project 1 171616399 171623935 + MGP_BALBcJ_P0023554 Tagln2 protein_coding protein_coding MGP_BALBcJ_T0023555.1 MGP_BALBcJ_G0016730.1 mouse_genomes_project 1 171616597 171622409 + MGP_BALBcJ_P0023555 Tagln2 protein_coding protein_coding MGP_BALBcJ_T0023556.1 MGP_BALBcJ_G0016730.1 mouse_genomes_project 1 171617621 171623310 + MGP_BALBcJ_P0023556 Tagln2 protein_coding protein_coding MGP_BALBcJ_T0099099.1 MGP_BALBcJ_G0037135.1 mouse_genomes_project 1 70252534 70252725 + Gm25360 snRNA snRNA MGP_BALBcJ_T0002960.1 MGP_BALBcJ_G0002779.1 mouse_genomes_project 1 186668156 186670871 + 1700007P06Rik antisense antisense MGP_BALBcJ_T0009445.1 MGP_BALBcJ_G0007570.1 mouse_genomes_project 1 20426617 20426701 + Mir30c-2 miRNA miRNA MGP_BALBcJ_T0005837.1 MGP_BALBcJ_G0004899.1 mouse_genomes_project 1 105914291 105916503 - Gm15391 lincRNA lincRNA MGP_BALBcJ_T0022029.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131344298 131459581 - MGP_BALBcJ_P0022029 Nfasc protein_coding protein_coding MGP_BALBcJ_T0022030.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131349642 131522799 - MGP_BALBcJ_P0022030 Nfasc protein_coding protein_coding MGP_BALBcJ_T0022031.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131349731 131417137 - MGP_BALBcJ_P0022031 Nfasc protein_coding protein_coding MGP_BALBcJ_T0022032.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131355637 131367005 - Nfasc protein_coding processed_transcript MGP_BALBcJ_T0022033.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131379974 131522833 - MGP_BALBcJ_P0022033 Nfasc protein_coding protein_coding MGP_BALBcJ_T0022034.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131381773 131385299 - Nfasc protein_coding retained_intron MGP_BALBcJ_T0022035.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131399497 131404742 - Nfasc protein_coding retained_intron MGP_BALBcJ_T0022036.1 MGP_BALBcJ_G0016419.1 mouse_genomes_project 1 131444445 131522814 - Nfasc protein_coding processed_transcript MGP_BALBcJ_T0000574.1 MGP_BALBcJ_G0000512.1 mouse_genomes_project 1 104529776 104533087 - TEC TEC MGP_BALBcJ_T0000675.1 MGP_BALBcJ_G0000611.1 mouse_genomes_project 1 151939413 151939851 + TEC TEC MGP_BALBcJ_T0011219.1 MGP_BALBcJ_G0009344.1 mouse_genomes_project 1 29988226 29988518 + Gm23024 misc_RNA misc_RNA MGP_BALBcJ_T0020285.1 MGP_BALBcJ_G0016056.1 mouse_genomes_project 1 64966726 65006005 - MGP_BALBcJ_P0020285 Lancl1 protein_coding protein_coding MGP_BALBcJ_T0020286.1 MGP_BALBcJ_G0016056.1 mouse_genomes_project 1 64966726 65005998 - MGP_BALBcJ_P0020286 Lancl1 protein_coding protein_coding MGP_BALBcJ_T0020287.1 MGP_BALBcJ_G0016056.1 mouse_genomes_project 1 64969584 65005967 - MGP_BALBcJ_P0020287 Lancl1 protein_coding protein_coding MGP_BALBcJ_T0020288.1 MGP_BALBcJ_G0016056.1 mouse_genomes_project 1 64973227 64987687 - Lancl1 protein_coding processed_transcript MGP_BALBcJ_T0020289.1 MGP_BALBcJ_G0016056.1 mouse_genomes_project 1 64976142 65005967 - MGP_BALBcJ_P0020289 Lancl1 protein_coding protein_coding MGP_BALBcJ_T0020290.1 MGP_BALBcJ_G0016056.1 mouse_genomes_project 1 64986230 64988840 - Lancl1 protein_coding retained_intron MGP_BALBcJ_T0020792.1 MGP_BALBcJ_G0016147.1 mouse_genomes_project 1 78229871 78244913 - MGP_BALBcJ_P0020792 Fam124b protein_coding protein_coding MGP_BALBcJ_T0020793.1 MGP_BALBcJ_G0016147.1 mouse_genomes_project 1 78231491 78249453 - Fam124b protein_coding processed_transcript MGP_BALBcJ_T0023557.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171637338 171641004 + Cfap45 protein_coding retained_intron MGP_BALBcJ_T0023558.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171637581 171662529 + MGP_BALBcJ_P0023558 Cfap45 protein_coding protein_coding MGP_BALBcJ_T0023559.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171637673 171649446 + Cfap45 protein_coding retained_intron MGP_BALBcJ_T0023560.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171637676 171649340 + MGP_BALBcJ_P0023560 Cfap45 protein_coding protein_coding MGP_BALBcJ_T0023561.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171637718 171649317 + MGP_BALBcJ_P0023561 Cfap45 protein_coding protein_coding MGP_BALBcJ_T0023562.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171642831 171649400 + MGP_BALBcJ_P0023562 Cfap45 protein_coding protein_coding MGP_BALBcJ_T0023563.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171643192 171649400 + MGP_BALBcJ_P0023563 Cfap45 protein_coding protein_coding MGP_BALBcJ_T0023564.1 MGP_BALBcJ_G0016731.1 mouse_genomes_project 1 171654332 171657305 + MGP_BALBcJ_P0023564 Cfap45 protein_coding protein_coding MGP_BALBcJ_T0102097.1 MGP_BALBcJ_G0039914.1 mouse_genomes_project 1 173055621 173058063 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005965.1 MGP_BALBcJ_G0005000.1 mouse_genomes_project 1 169172095 169173235 + Gm37748 lincRNA lincRNA MGP_BALBcJ_T0099154.1 MGP_BALBcJ_G0037190.1 mouse_genomes_project 1 178131544 178131711 + Gm24405 snRNA snRNA MGP_BALBcJ_T0005946.1 MGP_BALBcJ_G0004985.1 mouse_genomes_project 1 163644980 163653362 + lincRNA lincRNA MGP_BALBcJ_T0000506.1 MGP_BALBcJ_G0000444.1 mouse_genomes_project 1 68304815 68307215 - TEC TEC MGP_BALBcJ_T0023472.1 MGP_BALBcJ_G0016714.1 mouse_genomes_project 1 171114801 171143042 - MGP_BALBcJ_P0023472 Vangl2 protein_coding protein_coding MGP_BALBcJ_T0023473.1 MGP_BALBcJ_G0016714.1 mouse_genomes_project 1 171114801 171141890 - MGP_BALBcJ_P0023473 Vangl2 protein_coding protein_coding MGP_BALBcJ_T0023474.1 MGP_BALBcJ_G0016714.1 mouse_genomes_project 1 171119097 171141890 - MGP_BALBcJ_P0023474 Vangl2 protein_coding protein_coding MGP_BALBcJ_T0023475.1 MGP_BALBcJ_G0016714.1 mouse_genomes_project 1 171119439 171123694 - Vangl2 protein_coding processed_transcript MGP_BALBcJ_T0023476.1 MGP_BALBcJ_G0016714.1 mouse_genomes_project 1 171124528 171141304 - MGP_BALBcJ_P0023476 Vangl2 protein_coding protein_coding MGP_BALBcJ_T0023477.1 MGP_BALBcJ_G0016714.1 mouse_genomes_project 1 171124611 171141863 - MGP_BALBcJ_P0023477 Vangl2 protein_coding protein_coding MGP_BALBcJ_T0100402.1 MGP_BALBcJ_G0038438.1 mouse_genomes_project 1 160063415 160063491 + Gm25789 snoRNA snoRNA MGP_BALBcJ_T0021390.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91806408 91880905 - MGP_BALBcJ_P0021390 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021391.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91808230 91847361 - MGP_BALBcJ_P0021391 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021392.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91808470 91842481 - MGP_BALBcJ_P0021392 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021393.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91829048 91847327 - Hdlbp protein_coding retained_intron MGP_BALBcJ_T0021394.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91831498 91847357 - MGP_BALBcJ_P0021394 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021395.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91831915 91842650 - MGP_BALBcJ_P0021395 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021396.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91838808 91847107 - MGP_BALBcJ_P0021396 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021397.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91838844 91880919 - MGP_BALBcJ_P0021397 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021398.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91841986 91847324 - Hdlbp protein_coding retained_intron MGP_BALBcJ_T0021399.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91842376 91880479 - MGP_BALBcJ_P0021399 Hdlbp protein_coding protein_coding MGP_BALBcJ_T0021400.1 MGP_BALBcJ_G0016279.1 mouse_genomes_project 1 91877254 91880482 - Hdlbp protein_coding retained_intron MGP_BALBcJ_T0005763.1 MGP_BALBcJ_G0004836.1 mouse_genomes_project 1 71552133 71559546 + Gm29186 lincRNA lincRNA MGP_BALBcJ_T0022306.1 MGP_BALBcJ_G0016477.1 mouse_genomes_project 1 134887193 134887760 + MGP_BALBcJ_P0022306 Ascl5 protein_coding protein_coding MGP_BALBcJ_T0002866.1 MGP_BALBcJ_G0002704.1 mouse_genomes_project 1 130903455 130906752 + Gm29629 antisense antisense MGP_BALBcJ_T0011868.1 MGP_BALBcJ_G0009965.1 mouse_genomes_project 1 7623195 7624651 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012310.1 MGP_BALBcJ_G0010407.1 mouse_genomes_project 1 171203110 171203440 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011959.1 MGP_BALBcJ_G0010056.1 mouse_genomes_project 1 35795948 35796477 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009441.1 MGP_BALBcJ_G0007566.1 mouse_genomes_project 1 11200987 11201341 + miRNA miRNA MGP_BALBcJ_T0023234.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167118937 167435635 - MGP_BALBcJ_P0023234 Pbx1 protein_coding protein_coding MGP_BALBcJ_T0023235.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167154013 167434578 - MGP_BALBcJ_P0023235 Pbx1 protein_coding protein_coding MGP_BALBcJ_T0023236.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167158804 167434431 - MGP_BALBcJ_P0023236 Pbx1 protein_coding protein_coding MGP_BALBcJ_T0023237.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167158844 167165119 - Pbx1 protein_coding processed_transcript MGP_BALBcJ_T0023238.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167159206 167434185 - MGP_BALBcJ_P0023238 Pbx1 protein_coding protein_coding MGP_BALBcJ_T0023239.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167183933 167434689 - MGP_BALBcJ_P0023239 Pbx1 protein_coding protein_coding MGP_BALBcJ_T0023240.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167208795 167434341 - Pbx1 protein_coding retained_intron MGP_BALBcJ_T0023241.1 MGP_BALBcJ_G0016659.1 mouse_genomes_project 1 167427141 167434689 - Pbx1 protein_coding retained_intron MGP_BALBcJ_T0022052.1 MGP_BALBcJ_G0016422.1 mouse_genomes_project 1 131831074 131852654 + MGP_BALBcJ_P0022052 Pik3c2b protein_coding protein_coding MGP_BALBcJ_T0022053.1 MGP_BALBcJ_G0016422.1 mouse_genomes_project 1 131831413 131853462 + Pik3c2b protein_coding retained_intron MGP_BALBcJ_T0022054.1 MGP_BALBcJ_G0016422.1 mouse_genomes_project 1 131831413 131866835 + Pik3c2b protein_coding retained_intron MGP_BALBcJ_T0022055.1 MGP_BALBcJ_G0016422.1 mouse_genomes_project 1 131831413 131894302 + MGP_BALBcJ_P0022055 Pik3c2b protein_coding protein_coding MGP_BALBcJ_T0024047.1 MGP_BALBcJ_G0016856.1 mouse_genomes_project 1 186172885 186260740 - MGP_BALBcJ_P0024047 Tgfb2 protein_coding protein_coding MGP_BALBcJ_T0024048.1 MGP_BALBcJ_G0016856.1 mouse_genomes_project 1 186174312 186260451 - MGP_BALBcJ_P0024048 Tgfb2 protein_coding protein_coding MGP_BALBcJ_T0024049.1 MGP_BALBcJ_G0016856.1 mouse_genomes_project 1 186175673 186203567 - Tgfb2 protein_coding retained_intron MGP_BALBcJ_T0024050.1 MGP_BALBcJ_G0016856.1 mouse_genomes_project 1 186181828 186203633 - Tgfb2 protein_coding retained_intron MGP_BALBcJ_T0024051.1 MGP_BALBcJ_G0016856.1 mouse_genomes_project 1 186185708 186222260 - Tgfb2 protein_coding processed_transcript MGP_BALBcJ_T0024052.1 MGP_BALBcJ_G0016856.1 mouse_genomes_project 1 186244955 186259084 - Tgfb2 protein_coding processed_transcript MGP_BALBcJ_T0002842.1 MGP_BALBcJ_G0002689.1 mouse_genomes_project 1 95308444 95347173 + Panct2 antisense antisense MGP_BALBcJ_T0002843.1 MGP_BALBcJ_G0002689.1 mouse_genomes_project 1 95309539 95319854 + Panct2 antisense antisense MGP_BALBcJ_T0002844.1 MGP_BALBcJ_G0002689.1 mouse_genomes_project 1 95309551 95315188 + Panct2 antisense antisense MGP_BALBcJ_T0099118.1 MGP_BALBcJ_G0037154.1 mouse_genomes_project 1 121180350 121180499 + Gm24547 snRNA snRNA MGP_BALBcJ_T0002902.1 MGP_BALBcJ_G0002732.1 mouse_genomes_project 1 156478220 156492300 - Gm15486 antisense antisense MGP_BALBcJ_T0002770.1 MGP_BALBcJ_G0002632.1 mouse_genomes_project 1 36975363 36983300 + D930019O06Rik antisense antisense MGP_BALBcJ_T0012170.1 MGP_BALBcJ_G0010267.1 mouse_genomes_project 1 111458262 111459652 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020993.1 MGP_BALBcJ_G0016189.1 mouse_genomes_project 1 84717779 84744939 + MGP_BALBcJ_P0020993 Cops7b protein_coding protein_coding MGP_BALBcJ_T0020994.1 MGP_BALBcJ_G0016189.1 mouse_genomes_project 1 84717813 84724519 + MGP_BALBcJ_P0020994 Cops7b protein_coding protein_coding MGP_BALBcJ_T0020995.1 MGP_BALBcJ_G0016189.1 mouse_genomes_project 1 84722325 84742063 + MGP_BALBcJ_P0020995 Cops7b protein_coding protein_coding MGP_BALBcJ_T0020996.1 MGP_BALBcJ_G0016189.1 mouse_genomes_project 1 84722356 84741889 + MGP_BALBcJ_P0020996 Cops7b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020997.1 MGP_BALBcJ_G0016189.1 mouse_genomes_project 1 84722367 84742541 + MGP_BALBcJ_P0020997 Cops7b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020998.1 MGP_BALBcJ_G0016189.1 mouse_genomes_project 1 84731965 84736727 + Cops7b protein_coding processed_transcript MGP_BALBcJ_T0000616.1 MGP_BALBcJ_G0000554.1 mouse_genomes_project 1 129253481 129255029 + TEC TEC MGP_BALBcJ_T0018903.1 MGP_BALBcJ_G0015785.1 mouse_genomes_project 1 11905221 11953841 - MGP_BALBcJ_P0018903 Trpa1 protein_coding protein_coding MGP_BALBcJ_T0020357.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607475 70654196 + Smarcal1 protein_coding retained_intron MGP_BALBcJ_T0020358.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607475 70626667 + Smarcal1 protein_coding retained_intron MGP_BALBcJ_T0020359.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607475 70623532 + Smarcal1 protein_coding retained_intron MGP_BALBcJ_T0020360.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607475 70660414 + MGP_BALBcJ_P0020360 Smarcal1 protein_coding protein_coding MGP_BALBcJ_T0020361.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607475 70610216 + MGP_BALBcJ_P0020361 Smarcal1 protein_coding protein_coding MGP_BALBcJ_T0020362.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607475 70623092 + MGP_BALBcJ_P0020362 Smarcal1 protein_coding protein_coding MGP_BALBcJ_T0020363.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70607839 70660414 + MGP_BALBcJ_P0020363 Smarcal1 protein_coding protein_coding MGP_BALBcJ_T0020364.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70609862 70654196 + Smarcal1 protein_coding retained_intron MGP_BALBcJ_T0020365.1 MGP_BALBcJ_G0016071.1 mouse_genomes_project 1 70643813 70655579 + Smarcal1 protein_coding retained_intron MGP_BALBcJ_T0012181.1 MGP_BALBcJ_G0010278.1 mouse_genomes_project 1 117789882 117790862 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012272.1 MGP_BALBcJ_G0010369.1 mouse_genomes_project 1 156362653 156363045 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019203.1 MGP_BALBcJ_G0015854.1 mouse_genomes_project 1 32122021 32146098 + MGP_BALBcJ_P0019203 Plekhb2 protein_coding protein_coding MGP_BALBcJ_T0019204.1 MGP_BALBcJ_G0015854.1 mouse_genomes_project 1 32122037 32151706 + MGP_BALBcJ_P0019204 Plekhb2 protein_coding protein_coding MGP_BALBcJ_T0019205.1 MGP_BALBcJ_G0015854.1 mouse_genomes_project 1 32123825 32135437 + MGP_BALBcJ_P0019205 Plekhb2 protein_coding protein_coding MGP_BALBcJ_T0019206.1 MGP_BALBcJ_G0015854.1 mouse_genomes_project 1 32149781 32151703 + Plekhb2 protein_coding processed_transcript MGP_BALBcJ_T0021064.1 MGP_BALBcJ_G0016204.1 mouse_genomes_project 1 85626142 85664083 - MGP_BALBcJ_P0021064 Ngef protein_coding protein_coding MGP_BALBcJ_T0021065.1 MGP_BALBcJ_G0016204.1 mouse_genomes_project 1 85626142 85726581 - MGP_BALBcJ_P0021065 Ngef protein_coding protein_coding MGP_BALBcJ_T0021066.1 MGP_BALBcJ_G0016204.1 mouse_genomes_project 1 85627993 85635482 - MGP_BALBcJ_P0021066 Ngef protein_coding protein_coding MGP_BALBcJ_T0021067.1 MGP_BALBcJ_G0016204.1 mouse_genomes_project 1 85629037 85635522 - Ngef protein_coding retained_intron MGP_BALBcJ_T0020520.1 MGP_BALBcJ_G0016101.1 mouse_genomes_project 1 72833071 72844447 + MGP_BALBcJ_P0020520 Wnt10a protein_coding protein_coding MGP_BALBcJ_T0005757.1 MGP_BALBcJ_G0004833.1 mouse_genomes_project 1 71425150 71441956 - Pinc lincRNA lincRNA MGP_BALBcJ_T0005758.1 MGP_BALBcJ_G0004833.1 mouse_genomes_project 1 71429724 71441956 - Pinc lincRNA lincRNA MGP_BALBcJ_T0011910.1 MGP_BALBcJ_G0010007.1 mouse_genomes_project 1 21264259 21265127 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0023581.1 MGP_BALBcJ_G0016741.1 mouse_genomes_project 1 172316243 172317185 + MGP_BALBcJ_P0023581 Olfr218 protein_coding protein_coding MGP_BALBcJ_T0000480.1 MGP_BALBcJ_G0000418.1 mouse_genomes_project 1 58731003 58732828 + TEC TEC MGP_BALBcJ_T0020373.1 MGP_BALBcJ_G0016076.1 mouse_genomes_project 1 71048695 71049531 - MGP_BALBcJ_P0020373 Tnp1 protein_coding protein_coding MGP_BALBcJ_T0005775.1 MGP_BALBcJ_G0004846.1 mouse_genomes_project 1 76669225 76673888 + Gm29611 lincRNA lincRNA MGP_BALBcJ_T0023136.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164598655 164639680 - MGP_BALBcJ_P0023136 Mpzl1 protein_coding protein_coding MGP_BALBcJ_T0023137.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164599793 164611262 - MGP_BALBcJ_P0023137 Mpzl1 protein_coding protein_coding MGP_BALBcJ_T0023138.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164599832 164639800 - MGP_BALBcJ_P0023138 Mpzl1 protein_coding protein_coding MGP_BALBcJ_T0023139.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164607287 164616083 - Mpzl1 protein_coding processed_transcript MGP_BALBcJ_T0023140.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164609694 164611218 - Mpzl1 protein_coding retained_intron MGP_BALBcJ_T0023141.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164611108 164619433 - Mpzl1 protein_coding processed_transcript MGP_BALBcJ_T0023142.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164611176 164639729 - MGP_BALBcJ_P0023142 Mpzl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023143.1 MGP_BALBcJ_G0016637.1 mouse_genomes_project 1 164613902 164639373 - Mpzl1 protein_coding processed_transcript MGP_BALBcJ_T0005941.1 MGP_BALBcJ_G0004980.1 mouse_genomes_project 1 162315854 162317677 - Gm26523 lincRNA lincRNA MGP_BALBcJ_T0000571.1 MGP_BALBcJ_G0000509.1 mouse_genomes_project 1 103377709 103380669 + TEC TEC MGP_BALBcJ_T0020356.1 MGP_BALBcJ_G0016070.1 mouse_genomes_project 1 70457166 70566936 - MGP_BALBcJ_P0020356 March4 protein_coding protein_coding MGP_BALBcJ_T0019109.1 MGP_BALBcJ_G0015837.1 mouse_genomes_project 1 29429518 29923320 + MGP_BALBcJ_P0019109 Khdrbs2 protein_coding protein_coding MGP_BALBcJ_T0019110.1 MGP_BALBcJ_G0015837.1 mouse_genomes_project 1 29429533 29506479 + MGP_BALBcJ_P0019110 Khdrbs2 protein_coding protein_coding MGP_BALBcJ_T0019111.1 MGP_BALBcJ_G0015837.1 mouse_genomes_project 1 29429552 29593224 + MGP_BALBcJ_P0019111 Khdrbs2 protein_coding protein_coding MGP_BALBcJ_T0019112.1 MGP_BALBcJ_G0015837.1 mouse_genomes_project 1 29429691 29567091 + MGP_BALBcJ_P0019112 Khdrbs2 protein_coding protein_coding MGP_BALBcJ_T0019113.1 MGP_BALBcJ_G0015837.1 mouse_genomes_project 1 29570218 29668646 + Khdrbs2 protein_coding processed_transcript MGP_BALBcJ_T0100338.1 MGP_BALBcJ_G0038374.1 mouse_genomes_project 1 43053646 43053777 + Gm23974 snoRNA snoRNA MGP_BALBcJ_T0009468.1 MGP_BALBcJ_G0007593.1 mouse_genomes_project 1 61185625 61185751 + Gm27512 miRNA miRNA MGP_BALBcJ_T0102106.1 MGP_BALBcJ_G0039923.1 mouse_genomes_project 1 177363659 177373162 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0019618.1 MGP_BALBcJ_G0015933.1 mouse_genomes_project 1 43201175 43201924 - Gm5269 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0019619.1 MGP_BALBcJ_G0015933.1 mouse_genomes_project 1 43201591 43201729 - MGP_BALBcJ_P0019619 Gm5269 protein_coding protein_coding MGP_BALBcJ_T0000685.1 MGP_BALBcJ_G0000621.1 mouse_genomes_project 1 155420805 155423398 + TEC TEC MGP_BALBcJ_T0099103.1 MGP_BALBcJ_G0037139.1 mouse_genomes_project 1 72252188 72252295 + Gm25524 snRNA snRNA MGP_BALBcJ_T0023844.1 MGP_BALBcJ_G0016809.1 mouse_genomes_project 1 180199534 180203831 - MGP_BALBcJ_P0023844 Mixl1 protein_coding protein_coding MGP_BALBcJ_T0019188.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 31949838 32084591 + MGP_BALBcJ_P0019188 protein_coding protein_coding MGP_BALBcJ_T0019189.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 32004060 32083681 + MGP_BALBcJ_P0019189 protein_coding protein_coding MGP_BALBcJ_T0019190.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 32021501 32078996 + MGP_BALBcJ_P0019190 protein_coding protein_coding MGP_BALBcJ_T0019191.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 32073555 32085161 + MGP_BALBcJ_P0019191 protein_coding protein_coding MGP_BALBcJ_T0019192.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 32073572 32081070 + protein_coding retained_intron MGP_BALBcJ_T0019193.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 32073573 32078550 + protein_coding retained_intron MGP_BALBcJ_T0019194.1 MGP_BALBcJ_G0015852.1 mouse_genomes_project 1 32073592 32080763 + MGP_BALBcJ_P0019194 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098731.1 MGP_BALBcJ_G0036785.1 mouse_genomes_project 1 85928591 85928863 + Gm25395 scaRNA scaRNA MGP_BALBcJ_T0009543.1 MGP_BALBcJ_G0007668.1 mouse_genomes_project 1 194619424 194619512 + Mir29c miRNA miRNA MGP_BALBcJ_T0009478.1 MGP_BALBcJ_G0007603.1 mouse_genomes_project 1 72944575 72944639 - Mir375 miRNA miRNA MGP_BALBcJ_T0016929.1 MGP_BALBcJ_G0015025.1 mouse_genomes_project 1 6606874 6678050 - 2610203C22Rik processed_transcript antisense MGP_BALBcJ_T0016930.1 MGP_BALBcJ_G0015025.1 mouse_genomes_project 1 6609553 6678095 - 2610203C22Rik processed_transcript retained_intron MGP_BALBcJ_T0016931.1 MGP_BALBcJ_G0015025.1 mouse_genomes_project 1 6647365 6678102 - 2610203C22Rik processed_transcript antisense MGP_BALBcJ_T0016932.1 MGP_BALBcJ_G0015025.1 mouse_genomes_project 1 6647970 6678133 - 2610203C22Rik processed_transcript antisense MGP_BALBcJ_T0016933.1 MGP_BALBcJ_G0015025.1 mouse_genomes_project 1 6650395 6678122 - 2610203C22Rik processed_transcript antisense MGP_BALBcJ_T0023569.1 MGP_BALBcJ_G0016734.1 mouse_genomes_project 1 171715090 171720850 - MGP_BALBcJ_P0023569 Fcrl6 protein_coding protein_coding MGP_BALBcJ_T0023570.1 MGP_BALBcJ_G0016734.1 mouse_genomes_project 1 171715989 171720846 - Fcrl6 protein_coding retained_intron MGP_BALBcJ_T0023571.1 MGP_BALBcJ_G0016734.1 mouse_genomes_project 1 171716428 171720850 - Fcrl6 protein_coding retained_intron MGP_BALBcJ_T0000699.1 MGP_BALBcJ_G0000635.1 mouse_genomes_project 1 158624499 158626773 + TEC TEC MGP_BALBcJ_T0012262.1 MGP_BALBcJ_G0010359.1 mouse_genomes_project 1 151726828 151729001 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011989.1 MGP_BALBcJ_G0010086.1 mouse_genomes_project 1 43324738 43325002 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022039.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131741346 131809365 - MGP_BALBcJ_P0022039 Mdm4 protein_coding protein_coding MGP_BALBcJ_T0022040.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131743515 131754600 - Mdm4 protein_coding processed_transcript MGP_BALBcJ_T0022041.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131772003 131809375 - MGP_BALBcJ_P0022041 Mdm4 protein_coding protein_coding MGP_BALBcJ_T0022042.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131772559 131809384 - MGP_BALBcJ_P0022042 Mdm4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022043.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131774129 131809381 - MGP_BALBcJ_P0022043 Mdm4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022044.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131774256 131809383 - MGP_BALBcJ_P0022044 Mdm4 protein_coding protein_coding MGP_BALBcJ_T0022045.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131779543 131802983 - Mdm4 protein_coding processed_transcript MGP_BALBcJ_T0022046.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131779546 131788269 - Mdm4 protein_coding retained_intron MGP_BALBcJ_T0022047.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131782341 131784298 - Mdm4 protein_coding retained_intron MGP_BALBcJ_T0022048.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131784046 131788072 - Mdm4 protein_coding retained_intron MGP_BALBcJ_T0022049.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131793109 131809357 - Mdm4 protein_coding retained_intron MGP_BALBcJ_T0022050.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131793163 131815536 - MGP_BALBcJ_P0022050 Mdm4 protein_coding protein_coding MGP_BALBcJ_T0022051.1 MGP_BALBcJ_G0016421.1 mouse_genomes_project 1 131801437 131809365 - Mdm4 protein_coding retained_intron MGP_BALBcJ_T0021712.1 MGP_BALBcJ_G0016351.1 mouse_genomes_project 1 119248124 119253695 + MGP_BALBcJ_P0021712 En1 protein_coding protein_coding MGP_BALBcJ_T0021095.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85955299 85977514 + Sag protein_coding retained_intron MGP_BALBcJ_T0021096.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85955299 85987000 + Sag protein_coding retained_intron MGP_BALBcJ_T0021097.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85955299 85987486 + Sag protein_coding retained_intron MGP_BALBcJ_T0021098.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85955299 85969550 + Sag protein_coding retained_intron MGP_BALBcJ_T0021099.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85955299 85998860 + MGP_BALBcJ_P0021099 Sag protein_coding protein_coding MGP_BALBcJ_T0021100.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85955299 85998995 + MGP_BALBcJ_P0021100 Sag protein_coding protein_coding MGP_BALBcJ_T0021101.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85963850 85976291 + Sag protein_coding processed_transcript MGP_BALBcJ_T0021102.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85972854 85976301 + Sag protein_coding processed_transcript MGP_BALBcJ_T0021103.1 MGP_BALBcJ_G0016208.1 mouse_genomes_project 1 85978701 85987504 + Sag protein_coding retained_intron MGP_BALBcJ_T0023929.1 MGP_BALBcJ_G0016828.1 mouse_genomes_project 1 181718984 181720160 - MGP_BALBcJ_P0023929 Vmn1r1 protein_coding protein_coding MGP_BALBcJ_T0021241.1 MGP_BALBcJ_G0016244.1 mouse_genomes_project 1 89746866 89754654 + MGP_BALBcJ_P0021241 Fam132b protein_coding protein_coding MGP_BALBcJ_T0021242.1 MGP_BALBcJ_G0016244.1 mouse_genomes_project 1 89751130 89754529 + MGP_BALBcJ_P0021242 Fam132b protein_coding protein_coding MGP_BALBcJ_T0102094.1 MGP_BALBcJ_G0039911.1 mouse_genomes_project 1 172216914 172217166 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0020576.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175949 73178701 + Ankzf1 protein_coding retained_intron MGP_BALBcJ_T0020577.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175958 73179151 + Ankzf1 protein_coding retained_intron MGP_BALBcJ_T0020578.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175958 73183004 + Ankzf1 protein_coding retained_intron MGP_BALBcJ_T0020579.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175958 73183004 + Ankzf1 protein_coding retained_intron MGP_BALBcJ_T0020580.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175958 73183004 + MGP_BALBcJ_P0020580 Ankzf1 protein_coding protein_coding MGP_BALBcJ_T0020581.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175958 73183004 + MGP_BALBcJ_P0020581 Ankzf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020582.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73175990 73179151 + MGP_BALBcJ_P0020582 Ankzf1 protein_coding protein_coding MGP_BALBcJ_T0020583.1 MGP_BALBcJ_G0016114.1 mouse_genomes_project 1 73179309 73180273 + Ankzf1 protein_coding retained_intron MGP_BALBcJ_T0011936.1 MGP_BALBcJ_G0010033.1 mouse_genomes_project 1 30362909 30363660 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012097.1 MGP_BALBcJ_G0010194.1 mouse_genomes_project 1 81188574 81188946 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100373.1 MGP_BALBcJ_G0038409.1 mouse_genomes_project 1 112212279 112212413 - Gm24937 snoRNA snoRNA MGP_BALBcJ_T0018956.1 MGP_BALBcJ_G0015795.1 mouse_genomes_project 1 13728511 13747525 + MGP_BALBcJ_P0018956 Tmem70 protein_coding protein_coding MGP_BALBcJ_T0018957.1 MGP_BALBcJ_G0015795.1 mouse_genomes_project 1 13728514 13746544 + Tmem70 protein_coding processed_transcript MGP_BALBcJ_T0018958.1 MGP_BALBcJ_G0015795.1 mouse_genomes_project 1 13728514 13747605 + MGP_BALBcJ_P0018958 Tmem70 protein_coding protein_coding MGP_BALBcJ_T0018959.1 MGP_BALBcJ_G0015795.1 mouse_genomes_project 1 13728540 13729116 + Tmem70 protein_coding processed_transcript MGP_BALBcJ_T0005736.1 MGP_BALBcJ_G0004818.1 mouse_genomes_project 1 62173892 62286088 - Gm28981 lincRNA lincRNA MGP_BALBcJ_T0101579.1 MGP_BALBcJ_G0039613.1 mouse_genomes_project 1 43333415 43343457 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101580.1 MGP_BALBcJ_G0039613.1 mouse_genomes_project 1 43342650 43343266 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0006024.1 MGP_BALBcJ_G0005045.1 mouse_genomes_project 1 189989120 190014918 - Gm30725 lincRNA lincRNA MGP_BALBcJ_T0012269.1 MGP_BALBcJ_G0010366.1 mouse_genomes_project 1 154856211 154856470 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012199.1 MGP_BALBcJ_G0010296.1 mouse_genomes_project 1 121956877 121957126 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000485.1 MGP_BALBcJ_G0000423.1 mouse_genomes_project 1 59642529 59645492 + TEC TEC MGP_BALBcJ_T0000366.1 MGP_BALBcJ_G0000307.1 mouse_genomes_project 1 7517597 7520342 - TEC TEC MGP_BALBcJ_T0012159.1 MGP_BALBcJ_G0010256.1 mouse_genomes_project 1 108865434 108865972 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005646.1 MGP_BALBcJ_G0004755.1 mouse_genomes_project 1 28298132 28299464 + Gm28644 lincRNA lincRNA MGP_BALBcJ_T0022124.1 MGP_BALBcJ_G0016438.1 mouse_genomes_project 1 132706231 132717342 - MGP_BALBcJ_P0022124 Prelp protein_coding protein_coding MGP_BALBcJ_T0022125.1 MGP_BALBcJ_G0016438.1 mouse_genomes_project 1 132708647 132717339 - Prelp protein_coding processed_transcript MGP_BALBcJ_T0022838.1 MGP_BALBcJ_G0016578.1 mouse_genomes_project 1 157701871 157941323 - MGP_BALBcJ_P0022838 Pappa2 protein_coding protein_coding MGP_BALBcJ_T0022839.1 MGP_BALBcJ_G0016578.1 mouse_genomes_project 1 157756543 157803543 - MGP_BALBcJ_P0022839 Pappa2 protein_coding protein_coding MGP_BALBcJ_T0022840.1 MGP_BALBcJ_G0016578.1 mouse_genomes_project 1 157803347 157832260 - Pappa2 protein_coding retained_intron MGP_BALBcJ_T0022841.1 MGP_BALBcJ_G0016578.1 mouse_genomes_project 1 157817567 157827677 - Pappa2 protein_coding processed_transcript MGP_BALBcJ_T0022842.1 MGP_BALBcJ_G0016578.1 mouse_genomes_project 1 157941031 157943317 - Pappa2 protein_coding processed_transcript MGP_BALBcJ_T0022843.1 MGP_BALBcJ_G0016578.1 mouse_genomes_project 1 157941082 157963469 - Pappa2 protein_coding processed_transcript MGP_BALBcJ_T0102079.1 MGP_BALBcJ_G0039896.1 mouse_genomes_project 1 105478515 105487618 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000459.1 MGP_BALBcJ_G0000397.1 mouse_genomes_project 1 45000287 45002229 - TEC TEC MGP_BALBcJ_T0002775.1 MGP_BALBcJ_G0002636.1 mouse_genomes_project 1 38115277 38128997 + Gm37915 antisense antisense MGP_BALBcJ_T0005726.1 MGP_BALBcJ_G0004811.1 mouse_genomes_project 1 59445910 59446988 + Gm28449 lincRNA lincRNA MGP_BALBcJ_T0023445.1 MGP_BALBcJ_G0016705.1 mouse_genomes_project 1 170566372 170567644 + MGP_BALBcJ_P0023445 Alyref2 protein_coding protein_coding MGP_BALBcJ_T0021837.1 MGP_BALBcJ_G0016374.1 mouse_genomes_project 1 127305205 127309272 - MGP_BALBcJ_P0021837 Cxcr4 protein_coding protein_coding MGP_BALBcJ_T0021838.1 MGP_BALBcJ_G0016374.1 mouse_genomes_project 1 127306097 127309275 - MGP_BALBcJ_P0021838 Cxcr4 protein_coding protein_coding MGP_BALBcJ_T0023300.1 MGP_BALBcJ_G0016677.1 mouse_genomes_project 1 169913684 169919361 - MGP_BALBcJ_P0023300 Fcrlb protein_coding protein_coding MGP_BALBcJ_T0018724.1 MGP_BALBcJ_G0015757.1 mouse_genomes_project 1 3390143 3432566 + MGP_BALBcJ_P0018724 Fam150a protein_coding protein_coding MGP_BALBcJ_T0022615.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152451991 152483843 - MGP_BALBcJ_P0022615 Dhx9 protein_coding protein_coding MGP_BALBcJ_T0022616.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152451991 152483895 - MGP_BALBcJ_P0022616 Dhx9 protein_coding protein_coding MGP_BALBcJ_T0022617.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152458866 152483880 - MGP_BALBcJ_P0022617 Dhx9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022618.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152458872 152474374 - MGP_BALBcJ_P0022618 Dhx9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022619.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152460575 152483886 - MGP_BALBcJ_P0022619 Dhx9 protein_coding protein_coding MGP_BALBcJ_T0022620.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152468429 152474388 - Dhx9 protein_coding retained_intron MGP_BALBcJ_T0022621.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152473073 152483893 - Dhx9 protein_coding retained_intron MGP_BALBcJ_T0022622.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152474511 152476785 - Dhx9 protein_coding retained_intron MGP_BALBcJ_T0022623.1 MGP_BALBcJ_G0016539.1 mouse_genomes_project 1 152478605 152483869 - Dhx9 protein_coding retained_intron MGP_BALBcJ_T0012003.1 MGP_BALBcJ_G0010100.1 mouse_genomes_project 1 47054089 47054529 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102073.1 MGP_BALBcJ_G0039890.1 mouse_genomes_project 1 100594015 100595252 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005792.1 MGP_BALBcJ_G0004859.1 mouse_genomes_project 1 85290272 85294382 - Gm29374 lincRNA lincRNA MGP_BALBcJ_T0022978.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161563184 161579614 - MGP_BALBcJ_P0022978 Mettl13 protein_coding protein_coding MGP_BALBcJ_T0022979.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161564735 161579585 - MGP_BALBcJ_P0022979 Mettl13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022980.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161566903 161575401 - MGP_BALBcJ_P0022980 Mettl13 protein_coding protein_coding MGP_BALBcJ_T0022981.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161568212 161579321 - Mettl13 protein_coding processed_transcript MGP_BALBcJ_T0022982.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161569966 161577563 - MGP_BALBcJ_P0022982 Mettl13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022983.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161572499 161579601 - Mettl13 protein_coding retained_intron MGP_BALBcJ_T0022984.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161574692 161579591 - Mettl13 protein_coding retained_intron MGP_BALBcJ_T0022985.1 MGP_BALBcJ_G0016601.1 mouse_genomes_project 1 161577861 161579592 - Mettl13 protein_coding retained_intron MGP_BALBcJ_T0000512.1 MGP_BALBcJ_G0000450.1 mouse_genomes_project 1 72542615 72545472 - TEC TEC MGP_BALBcJ_T0012135.1 MGP_BALBcJ_G0010232.1 mouse_genomes_project 1 99813631 99814336 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000634.1 MGP_BALBcJ_G0000571.1 mouse_genomes_project 1 134724301 134726997 - TEC TEC MGP_BALBcJ_T0022557.1 MGP_BALBcJ_G0016526.1 mouse_genomes_project 1 150756877 150819171 + MGP_BALBcJ_P0022557 Edem3 protein_coding protein_coding MGP_BALBcJ_T0022558.1 MGP_BALBcJ_G0016526.1 mouse_genomes_project 1 150756880 150822287 + MGP_BALBcJ_P0022558 Edem3 protein_coding protein_coding MGP_BALBcJ_T0022559.1 MGP_BALBcJ_G0016526.1 mouse_genomes_project 1 150756966 150819215 + MGP_BALBcJ_P0022559 Edem3 protein_coding protein_coding MGP_BALBcJ_T0022560.1 MGP_BALBcJ_G0016526.1 mouse_genomes_project 1 150756966 150819215 + MGP_BALBcJ_P0022560 Edem3 protein_coding protein_coding MGP_BALBcJ_T0020369.1 MGP_BALBcJ_G0016074.1 mouse_genomes_project 1 70859713 70887452 + MGP_BALBcJ_P0020369 Igfbp2 protein_coding protein_coding MGP_BALBcJ_T0020370.1 MGP_BALBcJ_G0016074.1 mouse_genomes_project 1 70883656 70887106 + Igfbp2 protein_coding retained_intron MGP_BALBcJ_T0002987.1 MGP_BALBcJ_G0002798.1 mouse_genomes_project 1 192837298 192838436 - Gm37650 antisense antisense MGP_BALBcJ_T0022112.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132493043 132595546 - MGP_BALBcJ_P0022112 Atp2b4 protein_coding protein_coding MGP_BALBcJ_T0022113.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132496547 132547909 - MGP_BALBcJ_P0022113 Atp2b4 protein_coding protein_coding MGP_BALBcJ_T0022114.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132496547 132547909 - MGP_BALBcJ_P0022114 Atp2b4 protein_coding protein_coding MGP_BALBcJ_T0022115.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132500184 132547843 - MGP_BALBcJ_P0022115 Atp2b4 protein_coding protein_coding MGP_BALBcJ_T0022116.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132508020 132547443 - MGP_BALBcJ_P0022116 Atp2b4 protein_coding protein_coding MGP_BALBcJ_T0022117.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132510362 132511969 - Atp2b4 protein_coding retained_intron MGP_BALBcJ_T0022118.1 MGP_BALBcJ_G0016436.1 mouse_genomes_project 1 132547861 132595541 - Atp2b4 protein_coding processed_transcript MGP_BALBcJ_T0002741.1 MGP_BALBcJ_G0002609.1 mouse_genomes_project 1 13954175 14142849 + antisense antisense MGP_BALBcJ_T0021958.1 MGP_BALBcJ_G0016406.1 mouse_genomes_project 1 130724715 130744743 + MGP_BALBcJ_P0021958 Slc45a3 protein_coding protein_coding MGP_BALBcJ_T0021959.1 MGP_BALBcJ_G0016406.1 mouse_genomes_project 1 130732380 130744738 + MGP_BALBcJ_P0021959 Slc45a3 protein_coding protein_coding MGP_BALBcJ_T0021960.1 MGP_BALBcJ_G0016406.1 mouse_genomes_project 1 130738492 130739719 + MGP_BALBcJ_P0021960 Slc45a3 protein_coding protein_coding MGP_BALBcJ_T0021961.1 MGP_BALBcJ_G0016406.1 mouse_genomes_project 1 130740737 130743680 + Slc45a3 protein_coding processed_transcript MGP_BALBcJ_T0002849.1 MGP_BALBcJ_G0002692.1 mouse_genomes_project 1 104997638 105014683 + D630008O14Rik antisense antisense MGP_BALBcJ_T0002850.1 MGP_BALBcJ_G0002692.1 mouse_genomes_project 1 104997638 105034148 + D630008O14Rik antisense antisense MGP_BALBcJ_T0002829.1 MGP_BALBcJ_G0002676.1 mouse_genomes_project 1 85418245 85418939 - Efhd1os antisense antisense MGP_BALBcJ_T0012240.1 MGP_BALBcJ_G0010337.1 mouse_genomes_project 1 143809531 143810675 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011871.1 MGP_BALBcJ_G0009968.1 mouse_genomes_project 1 8286798 8287407 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020455.1 MGP_BALBcJ_G0016091.1 mouse_genomes_project 1 72548118 72572774 + MGP_BALBcJ_P0020455 Cnot9 protein_coding protein_coding MGP_BALBcJ_T0020456.1 MGP_BALBcJ_G0016091.1 mouse_genomes_project 1 72548120 72569023 + Cnot9 protein_coding processed_transcript MGP_BALBcJ_T0020457.1 MGP_BALBcJ_G0016091.1 mouse_genomes_project 1 72565462 72570109 + Cnot9 protein_coding retained_intron MGP_BALBcJ_T0023678.1 MGP_BALBcJ_G0016780.1 mouse_genomes_project 1 175266077 175590504 - MGP_BALBcJ_P0023678 Pld5 protein_coding protein_coding MGP_BALBcJ_T0023679.1 MGP_BALBcJ_G0016780.1 mouse_genomes_project 1 175266178 175590518 - MGP_BALBcJ_P0023679 Pld5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023680.1 MGP_BALBcJ_G0016780.1 mouse_genomes_project 1 175267462 175528296 - MGP_BALBcJ_P0023680 Pld5 protein_coding protein_coding MGP_BALBcJ_T0023681.1 MGP_BALBcJ_G0016780.1 mouse_genomes_project 1 175298046 175590481 - Pld5 protein_coding retained_intron MGP_BALBcJ_T0023682.1 MGP_BALBcJ_G0016780.1 mouse_genomes_project 1 175349308 175528195 - Pld5 protein_coding retained_intron MGP_BALBcJ_T0023683.1 MGP_BALBcJ_G0016780.1 mouse_genomes_project 1 175575972 175590480 - MGP_BALBcJ_P0023683 Pld5 protein_coding protein_coding MGP_BALBcJ_T0009504.1 MGP_BALBcJ_G0007629.1 mouse_genomes_project 1 126908911 126908981 + Mir128-1 miRNA miRNA MGP_BALBcJ_T0020794.1 MGP_BALBcJ_G0016148.1 mouse_genomes_project 1 78296661 78373895 - MGP_BALBcJ_P0020794 Cul3 protein_coding protein_coding MGP_BALBcJ_T0020795.1 MGP_BALBcJ_G0016148.1 mouse_genomes_project 1 78298561 78373219 - MGP_BALBcJ_P0020795 Cul3 protein_coding protein_coding MGP_BALBcJ_T0020796.1 MGP_BALBcJ_G0016148.1 mouse_genomes_project 1 78298685 78309180 - MGP_BALBcJ_P0020796 Cul3 protein_coding protein_coding MGP_BALBcJ_T0020797.1 MGP_BALBcJ_G0016148.1 mouse_genomes_project 1 78298980 78308303 - Cul3 protein_coding retained_intron MGP_BALBcJ_T0020798.1 MGP_BALBcJ_G0016148.1 mouse_genomes_project 1 78318788 78373215 - MGP_BALBcJ_P0020798 Cul3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020799.1 MGP_BALBcJ_G0016148.1 mouse_genomes_project 1 78320560 78373187 - MGP_BALBcJ_P0020799 Cul3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019820.1 MGP_BALBcJ_G0015971.1 mouse_genomes_project 1 53032957 53090395 - MGP_BALBcJ_P0019820 Rftn2 protein_coding protein_coding MGP_BALBcJ_T0019821.1 MGP_BALBcJ_G0015971.1 mouse_genomes_project 1 53034546 53090395 - MGP_BALBcJ_P0019821 Rftn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019822.1 MGP_BALBcJ_G0015971.1 mouse_genomes_project 1 53064813 53090395 - MGP_BALBcJ_P0019822 Rftn2 protein_coding protein_coding MGP_BALBcJ_T0019823.1 MGP_BALBcJ_G0015971.1 mouse_genomes_project 1 53067109 53069904 - Rftn2 protein_coding processed_transcript MGP_BALBcJ_T0019824.1 MGP_BALBcJ_G0015971.1 mouse_genomes_project 1 53087555 53090395 - Rftn2 protein_coding processed_transcript MGP_BALBcJ_T0019367.1 MGP_BALBcJ_G0015881.1 mouse_genomes_project 1 35168313 35183914 - MGP_BALBcJ_P0019367 Mitd1 protein_coding protein_coding MGP_BALBcJ_T0019368.1 MGP_BALBcJ_G0015881.1 mouse_genomes_project 1 35172400 35183918 - MGP_BALBcJ_P0019368 Mitd1 protein_coding protein_coding MGP_BALBcJ_T0019369.1 MGP_BALBcJ_G0015881.1 mouse_genomes_project 1 35172402 35173631 - Mitd1 protein_coding processed_transcript MGP_BALBcJ_T0019370.1 MGP_BALBcJ_G0015881.1 mouse_genomes_project 1 35172500 35175381 - Mitd1 protein_coding processed_transcript MGP_BALBcJ_T0019371.1 MGP_BALBcJ_G0015881.1 mouse_genomes_project 1 35175441 35183783 - Mitd1 protein_coding retained_intron MGP_BALBcJ_T0005846.1 MGP_BALBcJ_G0004906.1 mouse_genomes_project 1 117688889 117690265 + Gm26831 lincRNA lincRNA MGP_BALBcJ_T0000784.1 MGP_BALBcJ_G0000718.1 mouse_genomes_project 1 189188263 189189148 - TEC TEC MGP_BALBcJ_T0099141.1 MGP_BALBcJ_G0037177.1 mouse_genomes_project 1 166344221 166344328 + Gm24182 snRNA snRNA MGP_BALBcJ_T0102061.1 MGP_BALBcJ_G0039878.1 mouse_genomes_project 1 85219277 85222248 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012315.1 MGP_BALBcJ_G0010412.1 mouse_genomes_project 1 176136332 176136661 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020001.1 MGP_BALBcJ_G0016004.1 mouse_genomes_project 1 57415940 57420470 + MGP_BALBcJ_P0020001 Fzd7 protein_coding protein_coding MGP_BALBcJ_T0002793.1 MGP_BALBcJ_G0002650.1 mouse_genomes_project 1 57087607 57105510 + Gm29017 antisense antisense MGP_BALBcJ_T0017042.1 MGP_BALBcJ_G0015061.1 mouse_genomes_project 1 169874790 169887958 + Gm9929 processed_transcript processed_transcript MGP_BALBcJ_T0021581.1 MGP_BALBcJ_G0016322.1 mouse_genomes_project 1 106035514 106050477 + MGP_BALBcJ_P0021581 Serpinb2 protein_coding protein_coding MGP_BALBcJ_T0021582.1 MGP_BALBcJ_G0016322.1 mouse_genomes_project 1 106035588 106050471 + MGP_BALBcJ_P0021582 Serpinb2 protein_coding protein_coding MGP_BALBcJ_T0021583.1 MGP_BALBcJ_G0016322.1 mouse_genomes_project 1 106046819 106062504 + MGP_BALBcJ_P0021583 Serpinb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021584.1 MGP_BALBcJ_G0016322.1 mouse_genomes_project 1 106048533 106058143 + MGP_BALBcJ_P0021584 Serpinb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000790.1 MGP_BALBcJ_G0000724.1 mouse_genomes_project 1 192362212 192364309 - TEC TEC MGP_BALBcJ_T0000791.1 MGP_BALBcJ_G0000724.1 mouse_genomes_project 1 192362263 192363814 - TEC TEC MGP_BALBcJ_T0021323.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91301457 91311516 + MGP_BALBcJ_P0021323 Rnpepl1 protein_coding protein_coding MGP_BALBcJ_T0021324.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91301499 91311247 + Rnpepl1 protein_coding retained_intron MGP_BALBcJ_T0021325.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91301527 91304083 + Rnpepl1 protein_coding retained_intron MGP_BALBcJ_T0021326.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91301795 91307412 + MGP_BALBcJ_P0021326 Rnpepl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021327.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91301883 91306608 + MGP_BALBcJ_P0021327 Rnpepl1 protein_coding protein_coding MGP_BALBcJ_T0021328.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91306518 91311247 + Rnpepl1 protein_coding retained_intron MGP_BALBcJ_T0021329.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91307465 91311247 + MGP_BALBcJ_P0021329 Rnpepl1 protein_coding protein_coding MGP_BALBcJ_T0021330.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91307479 91309891 + Rnpepl1 protein_coding retained_intron MGP_BALBcJ_T0021331.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91307686 91308748 + Rnpepl1 protein_coding retained_intron MGP_BALBcJ_T0021332.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91307821 91309740 + MGP_BALBcJ_P0021332 Rnpepl1 protein_coding protein_coding MGP_BALBcJ_T0021333.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91308090 91309892 + Rnpepl1 protein_coding retained_intron MGP_BALBcJ_T0021334.1 MGP_BALBcJ_G0016266.1 mouse_genomes_project 1 91310288 91315059 + MGP_BALBcJ_P0021334 Rnpepl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020513.1 MGP_BALBcJ_G0016099.1 mouse_genomes_project 1 72779451 72789475 - MGP_BALBcJ_P0020513 Prkag3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020514.1 MGP_BALBcJ_G0016099.1 mouse_genomes_project 1 72780738 72789741 - MGP_BALBcJ_P0020514 Prkag3 protein_coding protein_coding MGP_BALBcJ_T0020515.1 MGP_BALBcJ_G0016099.1 mouse_genomes_project 1 72780738 72789097 - MGP_BALBcJ_P0020515 Prkag3 protein_coding protein_coding MGP_BALBcJ_T0020516.1 MGP_BALBcJ_G0016099.1 mouse_genomes_project 1 72782000 72789387 - MGP_BALBcJ_P0020516 Prkag3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020517.1 MGP_BALBcJ_G0016099.1 mouse_genomes_project 1 72788037 72789424 - MGP_BALBcJ_P0020517 Prkag3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005923.1 MGP_BALBcJ_G0004968.1 mouse_genomes_project 1 153260118 153274783 + 4930532M18Rik lincRNA lincRNA MGP_BALBcJ_T0005924.1 MGP_BALBcJ_G0004968.1 mouse_genomes_project 1 153261427 153274604 + 4930532M18Rik lincRNA lincRNA MGP_BALBcJ_T0012346.1 MGP_BALBcJ_G0010443.1 mouse_genomes_project 1 191576305 191576537 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022330.1 MGP_BALBcJ_G0016482.1 mouse_genomes_project 1 135098651 135099728 - MGP_BALBcJ_P0022330 Gpr25 protein_coding protein_coding MGP_BALBcJ_T0009506.1 MGP_BALBcJ_G0007631.1 mouse_genomes_project 1 130963604 130963701 + Mir135b miRNA miRNA MGP_BALBcJ_T0022019.1 MGP_BALBcJ_G0016417.1 mouse_genomes_project 1 131285728 131288138 + MGP_BALBcJ_P0022019 Tmem81 protein_coding protein_coding MGP_BALBcJ_T0022020.1 MGP_BALBcJ_G0016417.1 mouse_genomes_project 1 131286387 131288138 + MGP_BALBcJ_P0022020 Tmem81 protein_coding protein_coding MGP_BALBcJ_T0009469.1 MGP_BALBcJ_G0007594.1 mouse_genomes_project 1 61262065 61262203 - Gm24513 miRNA miRNA MGP_BALBcJ_T0022653.1 MGP_BALBcJ_G0016547.1 mouse_genomes_project 1 152896334 152901486 + MGP_BALBcJ_P0022653 Teddm1a protein_coding protein_coding MGP_BALBcJ_T0002756.1 MGP_BALBcJ_G0002621.1 mouse_genomes_project 1 33383641 33384704 - Gm37335 antisense antisense MGP_BALBcJ_T0005926.1 MGP_BALBcJ_G0004970.1 mouse_genomes_project 1 154056027 154075694 - Gm9530 lincRNA lincRNA MGP_BALBcJ_T0021111.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86109754 86141160 - MGP_BALBcJ_P0021111 Usp40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021112.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86109756 86173957 - MGP_BALBcJ_P0021112 Usp40 protein_coding protein_coding MGP_BALBcJ_T0021113.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86111078 86173940 - MGP_BALBcJ_P0021113 Usp40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021114.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86111078 86173940 - MGP_BALBcJ_P0021114 Usp40 protein_coding protein_coding MGP_BALBcJ_T0021115.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86114334 86116309 - Usp40 protein_coding retained_intron MGP_BALBcJ_T0021116.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86129693 86131874 - Usp40 protein_coding retained_intron MGP_BALBcJ_T0021117.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86151333 86173934 - Usp40 protein_coding retained_intron MGP_BALBcJ_T0021118.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86171299 86173956 - Usp40 protein_coding retained_intron MGP_BALBcJ_T0021119.1 MGP_BALBcJ_G0016210.1 mouse_genomes_project 1 86171299 86173635 - Usp40 protein_coding retained_intron MGP_BALBcJ_T0000401.1 MGP_BALBcJ_G0000340.1 mouse_genomes_project 1 22478872 22482309 - TEC TEC MGP_BALBcJ_T0023454.1 MGP_BALBcJ_G0016708.1 mouse_genomes_project 1 170745352 170759393 - MGP_BALBcJ_P0023454 Slamf7 protein_coding protein_coding MGP_BALBcJ_T0023455.1 MGP_BALBcJ_G0016708.1 mouse_genomes_project 1 170746146 170759473 - MGP_BALBcJ_P0023455 Slamf7 protein_coding protein_coding MGP_BALBcJ_T0023456.1 MGP_BALBcJ_G0016708.1 mouse_genomes_project 1 170746659 170759393 - MGP_BALBcJ_P0023456 Slamf7 protein_coding protein_coding MGP_BALBcJ_T0023398.1 MGP_BALBcJ_G0016695.1 mouse_genomes_project 1 170359676 170366596 - MGP_BALBcJ_P0023398 Ufc1 protein_coding protein_coding MGP_BALBcJ_T0023399.1 MGP_BALBcJ_G0016695.1 mouse_genomes_project 1 170359678 170361532 - Ufc1 protein_coding retained_intron MGP_BALBcJ_T0023400.1 MGP_BALBcJ_G0016695.1 mouse_genomes_project 1 170359807 170366513 - MGP_BALBcJ_P0023400 Ufc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023401.1 MGP_BALBcJ_G0016695.1 mouse_genomes_project 1 170359825 170366559 - MGP_BALBcJ_P0023401 Ufc1 protein_coding protein_coding MGP_BALBcJ_T0023402.1 MGP_BALBcJ_G0016695.1 mouse_genomes_project 1 170359890 170366512 - Ufc1 protein_coding retained_intron MGP_BALBcJ_T0018859.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9720580 9883940 + MGP_BALBcJ_P0018859 Sulf1 protein_coding protein_coding MGP_BALBcJ_T0018860.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9747518 9856997 + Sulf1 protein_coding retained_intron MGP_BALBcJ_T0018861.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9749048 9819585 + MGP_BALBcJ_P0018861 Sulf1 protein_coding protein_coding MGP_BALBcJ_T0018862.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9757641 9819675 + MGP_BALBcJ_P0018862 Sulf1 protein_coding protein_coding MGP_BALBcJ_T0018863.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9818478 9821854 + Sulf1 protein_coding retained_intron MGP_BALBcJ_T0018864.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9819562 9894082 + MGP_BALBcJ_P0018864 Sulf1 protein_coding protein_coding MGP_BALBcJ_T0018865.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9867722 9872192 + Sulf1 protein_coding retained_intron MGP_BALBcJ_T0018866.1 MGP_BALBcJ_G0015776.1 mouse_genomes_project 1 9874275 9894076 + MGP_BALBcJ_P0018866 Sulf1 protein_coding protein_coding MGP_BALBcJ_T0021516.1 MGP_BALBcJ_G0016304.1 mouse_genomes_project 1 103234934 103461165 + MGP_BALBcJ_P0021516 Cdh20 protein_coding protein_coding MGP_BALBcJ_T0011231.1 MGP_BALBcJ_G0009356.1 mouse_genomes_project 1 96380337 96380649 + Gm25413 misc_RNA misc_RNA MGP_BALBcJ_T0016956.1 MGP_BALBcJ_G0015036.1 mouse_genomes_project 1 61187903 61195154 + Platr12 processed_transcript antisense MGP_BALBcJ_T0016957.1 MGP_BALBcJ_G0015036.1 mouse_genomes_project 1 61188298 61195507 + Platr12 processed_transcript lincRNA MGP_BALBcJ_T0000627.1 MGP_BALBcJ_G0000564.1 mouse_genomes_project 1 132623436 132625134 + TEC TEC MGP_BALBcJ_T0100326.1 MGP_BALBcJ_G0038362.1 mouse_genomes_project 1 18017824 18017955 - Gm24171 snoRNA snoRNA MGP_BALBcJ_T0011996.1 MGP_BALBcJ_G0010093.1 mouse_genomes_project 1 46063952 46064165 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011945.1 MGP_BALBcJ_G0010042.1 mouse_genomes_project 1 31801606 31802081 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022626.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152652820 152700025 + MGP_BALBcJ_P0022626 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022627.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152660846 152690710 + MGP_BALBcJ_P0022627 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022628.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152664483 152692687 + MGP_BALBcJ_P0022628 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022629.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152665141 152692479 + MGP_BALBcJ_P0022629 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022630.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152665179 152695280 + MGP_BALBcJ_P0022630 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022631.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152665460 152690760 + MGP_BALBcJ_P0022631 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022632.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152665524 152690765 + MGP_BALBcJ_P0022632 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022633.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152665540 152692648 + MGP_BALBcJ_P0022633 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022634.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152665576 152697369 + MGP_BALBcJ_P0022634 Rgs8 protein_coding protein_coding MGP_BALBcJ_T0022635.1 MGP_BALBcJ_G0016541.1 mouse_genomes_project 1 152667356 152670567 + Rgs8 protein_coding processed_transcript MGP_BALBcJ_T0022743.1 MGP_BALBcJ_G0016563.1 mouse_genomes_project 1 155218746 155267101 - MGP_BALBcJ_P0022743 Tdrd5 protein_coding protein_coding MGP_BALBcJ_T0022744.1 MGP_BALBcJ_G0016563.1 mouse_genomes_project 1 155218748 155266785 - MGP_BALBcJ_P0022744 Tdrd5 protein_coding protein_coding MGP_BALBcJ_T0022745.1 MGP_BALBcJ_G0016563.1 mouse_genomes_project 1 155223843 155227611 - Tdrd5 protein_coding processed_transcript MGP_BALBcJ_T0022746.1 MGP_BALBcJ_G0016563.1 mouse_genomes_project 1 155231113 155238486 - Tdrd5 protein_coding retained_intron MGP_BALBcJ_T0022747.1 MGP_BALBcJ_G0016563.1 mouse_genomes_project 1 155257114 155267043 - MGP_BALBcJ_P0022747 Tdrd5 protein_coding protein_coding MGP_BALBcJ_T0021301.1 MGP_BALBcJ_G0016256.1 mouse_genomes_project 1 90953584 90954666 + MGP_BALBcJ_P0021301 Olfr1413 protein_coding protein_coding MGP_BALBcJ_T0099119.1 MGP_BALBcJ_G0037155.1 mouse_genomes_project 1 123202667 123202771 + Gm25578 snRNA snRNA MGP_BALBcJ_T0021753.1 MGP_BALBcJ_G0016359.1 mouse_genomes_project 1 124390283 124596299 + MGP_BALBcJ_P0021753 Gpr39 protein_coding protein_coding MGP_BALBcJ_T0021754.1 MGP_BALBcJ_G0016359.1 mouse_genomes_project 1 124556321 124595610 + Gpr39 protein_coding processed_transcript MGP_BALBcJ_T0009443.1 MGP_BALBcJ_G0007568.1 mouse_genomes_project 1 17772106 17772225 + Mir133b miRNA miRNA MGP_BALBcJ_T0017012.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160059535 160062632 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017013.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160059720 160063644 + Gas5 processed_transcript lincRNA MGP_BALBcJ_T0017014.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060042 160063640 + Gas5 processed_transcript lincRNA MGP_BALBcJ_T0017015.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060180 160063642 + Gas5 processed_transcript lincRNA MGP_BALBcJ_T0017016.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060276 160063638 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017017.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060276 160063642 + Gas5 processed_transcript lincRNA MGP_BALBcJ_T0017018.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060276 160062647 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017019.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060279 160063644 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017020.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060279 160063644 + Gas5 processed_transcript lincRNA MGP_BALBcJ_T0017021.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060279 160063639 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017022.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060279 160062153 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017023.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060280 160063354 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017024.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060281 160062661 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017025.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060285 160061730 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017026.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060291 160063644 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017027.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060297 160063644 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017028.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060299 160063582 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017029.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160060301 160063644 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017030.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160061125 160061989 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017031.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160061795 160063644 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017032.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160062385 160063637 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017033.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160062406 160063233 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017034.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160062450 160063640 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017035.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160062824 160063642 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0017036.1 MGP_BALBcJ_G0015057.1 mouse_genomes_project 1 160062888 160063644 + Gas5 processed_transcript retained_intron MGP_BALBcJ_T0012143.1 MGP_BALBcJ_G0010240.1 mouse_genomes_project 1 103782557 103782883 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000375.1 MGP_BALBcJ_G0000316.1 mouse_genomes_project 1 10329476 10331340 - TEC TEC MGP_BALBcJ_T0023871.1 MGP_BALBcJ_G0016817.1 mouse_genomes_project 1 180490614 180510351 - MGP_BALBcJ_P0023871 Ephx1 protein_coding protein_coding MGP_BALBcJ_T0023872.1 MGP_BALBcJ_G0016817.1 mouse_genomes_project 1 180503773 180531576 - MGP_BALBcJ_P0023872 Ephx1 protein_coding protein_coding MGP_BALBcJ_T0023873.1 MGP_BALBcJ_G0016817.1 mouse_genomes_project 1 180503773 180531576 - MGP_BALBcJ_P0023873 Ephx1 protein_coding protein_coding MGP_BALBcJ_T0023874.1 MGP_BALBcJ_G0016817.1 mouse_genomes_project 1 180510329 180534911 - MGP_BALBcJ_P0023874 Ephx1 protein_coding protein_coding MGP_BALBcJ_T0012076.1 MGP_BALBcJ_G0010173.1 mouse_genomes_project 1 70113992 70115072 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101575.1 MGP_BALBcJ_G0039611.1 mouse_genomes_project 1 31670489 31671318 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101576.1 MGP_BALBcJ_G0039611.1 mouse_genomes_project 1 31671202 31673014 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0000737.1 MGP_BALBcJ_G0000673.1 mouse_genomes_project 1 175259180 175261176 - TEC TEC MGP_BALBcJ_T0020205.1 MGP_BALBcJ_G0016041.1 mouse_genomes_project 1 63063597 63065762 - MGP_BALBcJ_P0020205 Crygc protein_coding protein_coding MGP_BALBcJ_T0020206.1 MGP_BALBcJ_G0016041.1 mouse_genomes_project 1 63063603 63065594 - MGP_BALBcJ_P0020206 Crygc protein_coding protein_coding MGP_BALBcJ_T0002890.1 MGP_BALBcJ_G0002723.1 mouse_genomes_project 1 149554480 149598167 + antisense antisense MGP_BALBcJ_T0002891.1 MGP_BALBcJ_G0002723.1 mouse_genomes_project 1 149554513 149716648 + antisense antisense MGP_BALBcJ_T0005906.1 MGP_BALBcJ_G0004954.1 mouse_genomes_project 1 147194597 147208397 - Gm29515 lincRNA lincRNA MGP_BALBcJ_T0018904.1 MGP_BALBcJ_G0015786.1 mouse_genomes_project 1 12322340 12762744 + MGP_BALBcJ_P0018904 Kcnb2 protein_coding protein_coding MGP_BALBcJ_T0018905.1 MGP_BALBcJ_G0015786.1 mouse_genomes_project 1 12350239 12773945 + MGP_BALBcJ_P0018905 Kcnb2 protein_coding protein_coding MGP_BALBcJ_T0022220.1 MGP_BALBcJ_G0016461.1 mouse_genomes_project 1 133967589 133974994 - MGP_BALBcJ_P0022220 Gpr37l1 protein_coding protein_coding MGP_BALBcJ_T0011993.1 MGP_BALBcJ_G0010090.1 mouse_genomes_project 1 45047350 45048681 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000422.1 MGP_BALBcJ_G0000361.1 mouse_genomes_project 1 29742047 29743591 + TEC TEC MGP_BALBcJ_T0011228.1 MGP_BALBcJ_G0009353.1 mouse_genomes_project 1 72805293 72805386 + Gm27507 misc_RNA misc_RNA MGP_BALBcJ_T0000674.1 MGP_BALBcJ_G0000610.1 mouse_genomes_project 1 151296194 151296540 - TEC TEC MGP_BALBcJ_T0021335.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91324944 91338521 + MGP_BALBcJ_P0021335 Capn10 protein_coding protein_coding MGP_BALBcJ_T0021336.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91325334 91331546 + MGP_BALBcJ_P0021336 Capn10 protein_coding protein_coding MGP_BALBcJ_T0021337.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91325401 91338509 + MGP_BALBcJ_P0021337 Capn10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021338.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91331032 91335683 + MGP_BALBcJ_P0021338 Capn10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021339.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91333283 91334324 + Capn10 protein_coding retained_intron MGP_BALBcJ_T0021340.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91337132 91337535 + Capn10 protein_coding processed_transcript MGP_BALBcJ_T0021341.1 MGP_BALBcJ_G0016267.1 mouse_genomes_project 1 91337464 91338170 + Capn10 protein_coding retained_intron MGP_BALBcJ_T0011932.1 MGP_BALBcJ_G0010029.1 mouse_genomes_project 1 28544042 28544682 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011950.1 MGP_BALBcJ_G0010047.1 mouse_genomes_project 1 32023375 32023523 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020221.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178262 63199171 + Pikfyve protein_coding retained_intron MGP_BALBcJ_T0020222.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178268 63240537 + MGP_BALBcJ_P0020222 Pikfyve protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020223.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178272 63219572 + Pikfyve protein_coding retained_intron MGP_BALBcJ_T0020224.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178273 63185960 + Pikfyve protein_coding retained_intron MGP_BALBcJ_T0020225.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178275 63199639 + Pikfyve protein_coding processed_transcript MGP_BALBcJ_T0020226.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178281 63272099 + MGP_BALBcJ_P0020226 Pikfyve protein_coding protein_coding MGP_BALBcJ_T0020227.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178283 63226905 + Pikfyve protein_coding retained_intron MGP_BALBcJ_T0020228.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178292 63185664 + MGP_BALBcJ_P0020228 Pikfyve protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020229.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63178329 63267416 + MGP_BALBcJ_P0020229 Pikfyve protein_coding protein_coding MGP_BALBcJ_T0020230.1 MGP_BALBcJ_G0016047.1 mouse_genomes_project 1 63190236 63209727 + Pikfyve protein_coding retained_intron MGP_BALBcJ_T0012131.1 MGP_BALBcJ_G0010228.1 mouse_genomes_project 1 99027630 99028183 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009515.1 MGP_BALBcJ_G0007640.1 mouse_genomes_project 1 152908349 152908460 + Mir8114 miRNA miRNA MGP_BALBcJ_T0011929.1 MGP_BALBcJ_G0010026.1 mouse_genomes_project 1 28533089 28533653 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009516.1 MGP_BALBcJ_G0007641.1 mouse_genomes_project 1 154308300 154308424 + Gm22569 miRNA miRNA MGP_BALBcJ_T0002883.1 MGP_BALBcJ_G0002717.1 mouse_genomes_project 1 135098261 135113261 + Gm26781 antisense antisense MGP_BALBcJ_T0100377.1 MGP_BALBcJ_G0038413.1 mouse_genomes_project 1 126094107 126094216 + Gm23734 snoRNA snoRNA MGP_BALBcJ_T0005824.1 MGP_BALBcJ_G0004889.1 mouse_genomes_project 1 95046272 95102538 - 4930533P14Rik lincRNA lincRNA MGP_BALBcJ_T0009492.1 MGP_BALBcJ_G0007617.1 mouse_genomes_project 1 91234164 91234230 + Mir149 miRNA miRNA MGP_BALBcJ_T0018689.1 MGP_BALBcJ_G0015752.1 mouse_genomes_project 1 1954956 2061477 - MGP_BALBcJ_P0018689 Rgs20 protein_coding protein_coding MGP_BALBcJ_T0018690.1 MGP_BALBcJ_G0015752.1 mouse_genomes_project 1 1954959 2118299 - MGP_BALBcJ_P0018690 Rgs20 protein_coding protein_coding MGP_BALBcJ_T0018691.1 MGP_BALBcJ_G0015752.1 mouse_genomes_project 1 1955804 2061477 - MGP_BALBcJ_P0018691 Rgs20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018692.1 MGP_BALBcJ_G0015752.1 mouse_genomes_project 1 1957672 2118296 - MGP_BALBcJ_P0018692 Rgs20 protein_coding protein_coding MGP_BALBcJ_T0018693.1 MGP_BALBcJ_G0015752.1 mouse_genomes_project 1 1968565 2061477 - Rgs20 protein_coding retained_intron MGP_BALBcJ_T0018694.1 MGP_BALBcJ_G0015752.1 mouse_genomes_project 1 2107086 2118287 - Rgs20 protein_coding processed_transcript MGP_BALBcJ_T0102076.1 MGP_BALBcJ_G0039893.1 mouse_genomes_project 1 101804534 101851808 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009532.1 MGP_BALBcJ_G0007657.1 mouse_genomes_project 1 177857342 177857463 - Gm27458 miRNA miRNA MGP_BALBcJ_T0023289.1 MGP_BALBcJ_G0016674.1 mouse_genomes_project 1 169711604 169873847 - MGP_BALBcJ_P0023289 Atf6 protein_coding unknown_likely_coding MGP_BALBcJ_T0023290.1 MGP_BALBcJ_G0016674.1 mouse_genomes_project 1 169711609 169873917 - MGP_BALBcJ_P0023290 Atf6 protein_coding protein_coding MGP_BALBcJ_T0023291.1 MGP_BALBcJ_G0016674.1 mouse_genomes_project 1 169799221 169801297 - Atf6 protein_coding retained_intron MGP_BALBcJ_T0022266.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134603858 134609525 + Tnni1 protein_coding processed_transcript MGP_BALBcJ_T0022267.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134607489 134629817 + MGP_BALBcJ_P0022267 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0022268.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134623597 134635184 + MGP_BALBcJ_P0022268 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0022269.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134623616 134634829 + Tnni1 protein_coding processed_transcript MGP_BALBcJ_T0022270.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134623616 134635184 + MGP_BALBcJ_P0022270 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0022271.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134623706 134634895 + MGP_BALBcJ_P0022271 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0022272.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134623714 134633930 + MGP_BALBcJ_P0022272 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0022273.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134624028 134635184 + MGP_BALBcJ_P0022273 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0022274.1 MGP_BALBcJ_G0016471.1 mouse_genomes_project 1 134629251 134634104 + MGP_BALBcJ_P0022274 Tnni1 protein_coding protein_coding MGP_BALBcJ_T0005712.1 MGP_BALBcJ_G0004799.1 mouse_genomes_project 1 54982852 54984913 + 1700126A01Rik lincRNA lincRNA MGP_BALBcJ_T0021693.1 MGP_BALBcJ_G0016346.1 mouse_genomes_project 1 118753538 118761271 - MGP_BALBcJ_P0021693 Dbi protein_coding protein_coding MGP_BALBcJ_T0021694.1 MGP_BALBcJ_G0016346.1 mouse_genomes_project 1 118753542 118761229 - MGP_BALBcJ_P0021694 Dbi protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021695.1 MGP_BALBcJ_G0016346.1 mouse_genomes_project 1 118753621 118760382 - Dbi protein_coding processed_transcript MGP_BALBcJ_T0021696.1 MGP_BALBcJ_G0016346.1 mouse_genomes_project 1 118753652 118761149 - MGP_BALBcJ_P0021696 Dbi protein_coding protein_coding MGP_BALBcJ_T0021697.1 MGP_BALBcJ_G0016346.1 mouse_genomes_project 1 118756262 118761259 - Dbi protein_coding retained_intron MGP_BALBcJ_T0021698.1 MGP_BALBcJ_G0016346.1 mouse_genomes_project 1 118759969 118761226 - Dbi protein_coding retained_intron MGP_BALBcJ_T0000782.1 MGP_BALBcJ_G0000716.1 mouse_genomes_project 1 187717022 187719459 + TEC TEC MGP_BALBcJ_T0022844.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158258067 158276993 + MGP_BALBcJ_P0022844 Rfwd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022845.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158258069 158377784 + MGP_BALBcJ_P0022845 Rfwd2 protein_coding protein_coding MGP_BALBcJ_T0022846.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158258181 158374954 + MGP_BALBcJ_P0022846 Rfwd2 protein_coding unknown_likely_coding MGP_BALBcJ_T0022847.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158258391 158315049 + MGP_BALBcJ_P0022847 Rfwd2 protein_coding protein_coding MGP_BALBcJ_T0022848.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158258433 158277016 + MGP_BALBcJ_P0022848 Rfwd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022849.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158265660 158293225 + Rfwd2 protein_coding retained_intron MGP_BALBcJ_T0022850.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158276121 158332479 + MGP_BALBcJ_P0022850 Rfwd2 protein_coding protein_coding MGP_BALBcJ_T0022851.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158284919 158334656 + MGP_BALBcJ_P0022851 Rfwd2 protein_coding protein_coding MGP_BALBcJ_T0022852.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158292972 158300113 + Rfwd2 protein_coding retained_intron MGP_BALBcJ_T0022853.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158332517 158335252 + Rfwd2 protein_coding retained_intron MGP_BALBcJ_T0022854.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158332528 158351159 + MGP_BALBcJ_P0022854 Rfwd2 protein_coding protein_coding MGP_BALBcJ_T0022855.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158334315 158351241 + Rfwd2 protein_coding retained_intron MGP_BALBcJ_T0022856.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158347107 158352077 + Rfwd2 protein_coding retained_intron MGP_BALBcJ_T0022857.1 MGP_BALBcJ_G0016579.1 mouse_genomes_project 1 158371617 158374457 + Rfwd2 protein_coding retained_intron MGP_BALBcJ_T0005904.1 MGP_BALBcJ_G0004952.1 mouse_genomes_project 1 138226512 138249958 + 4933436E23Rik lincRNA lincRNA MGP_BALBcJ_T0022580.1 MGP_BALBcJ_G0016531.1 mouse_genomes_project 1 151749037 151756834 + MGP_BALBcJ_P0022580 Apobec4 protein_coding protein_coding MGP_BALBcJ_T0021951.1 MGP_BALBcJ_G0016404.1 mouse_genomes_project 1 130625033 130631145 + MGP_BALBcJ_P0021951 Rab29 protein_coding protein_coding MGP_BALBcJ_T0021952.1 MGP_BALBcJ_G0016404.1 mouse_genomes_project 1 130625049 130631293 + MGP_BALBcJ_P0021952 Rab29 protein_coding protein_coding MGP_BALBcJ_T0021953.1 MGP_BALBcJ_G0016404.1 mouse_genomes_project 1 130625320 130630908 + MGP_BALBcJ_P0021953 Rab29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021954.1 MGP_BALBcJ_G0016404.1 mouse_genomes_project 1 130625462 130628798 + Rab29 protein_coding retained_intron MGP_BALBcJ_T0005825.1 MGP_BALBcJ_G0004890.1 mouse_genomes_project 1 96580987 96587703 + 1810006J02Rik lincRNA lincRNA MGP_BALBcJ_T0005826.1 MGP_BALBcJ_G0004890.1 mouse_genomes_project 1 96580998 96594223 + 1810006J02Rik lincRNA lincRNA MGP_BALBcJ_T0000708.1 MGP_BALBcJ_G0000644.1 mouse_genomes_project 1 159782986 159787006 + TEC TEC MGP_BALBcJ_T0019918.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56305701 56324114 + MGP_BALBcJ_P0019918 Nif3l1 protein_coding protein_coding MGP_BALBcJ_T0019919.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56305817 56342530 + MGP_BALBcJ_P0019919 Nif3l1 protein_coding protein_coding MGP_BALBcJ_T0019920.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56306178 56311058 + MGP_BALBcJ_P0019920 Nif3l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019921.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56306279 56308601 + MGP_BALBcJ_P0019921 Nif3l1 protein_coding protein_coding MGP_BALBcJ_T0019922.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56308181 56322924 + MGP_BALBcJ_P0019922 Nif3l1 protein_coding protein_coding MGP_BALBcJ_T0019923.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56309717 56318458 + Nif3l1 protein_coding retained_intron MGP_BALBcJ_T0019924.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56313749 56316846 + Nif3l1 protein_coding retained_intron MGP_BALBcJ_T0019925.1 MGP_BALBcJ_G0015990.1 mouse_genomes_project 1 56318342 56322042 + Nif3l1 protein_coding retained_intron MGP_BALBcJ_T0000611.1 MGP_BALBcJ_G0000549.1 mouse_genomes_project 1 128425196 128427883 + TEC TEC MGP_BALBcJ_T0005836.1 MGP_BALBcJ_G0004898.1 mouse_genomes_project 1 104857501 104859322 - A530053M12Rik lincRNA lincRNA MGP_BALBcJ_T0005718.1 MGP_BALBcJ_G0004803.1 mouse_genomes_project 1 57313057 57326242 + Gm29016 lincRNA lincRNA MGP_BALBcJ_T0022818.1 MGP_BALBcJ_G0016575.1 mouse_genomes_project 1 156487408 156548972 + MGP_BALBcJ_P0022818 Sec16b protein_coding protein_coding MGP_BALBcJ_T0022819.1 MGP_BALBcJ_G0016575.1 mouse_genomes_project 1 156487490 156548975 + MGP_BALBcJ_P0022819 Sec16b protein_coding protein_coding MGP_BALBcJ_T0022820.1 MGP_BALBcJ_G0016575.1 mouse_genomes_project 1 156506494 156548972 + MGP_BALBcJ_P0022820 Sec16b protein_coding protein_coding MGP_BALBcJ_T0022821.1 MGP_BALBcJ_G0016575.1 mouse_genomes_project 1 156513888 156542918 + MGP_BALBcJ_P0022821 Sec16b protein_coding protein_coding MGP_BALBcJ_T0022822.1 MGP_BALBcJ_G0016575.1 mouse_genomes_project 1 156518797 156524262 + Sec16b protein_coding retained_intron MGP_BALBcJ_T0099095.1 MGP_BALBcJ_G0037131.1 mouse_genomes_project 1 64823343 64823406 + Gm27934 snRNA snRNA MGP_BALBcJ_T0023232.1 MGP_BALBcJ_G0016658.1 mouse_genomes_project 1 166690372 166846722 + MGP_BALBcJ_P0023232 Lmx1a protein_coding protein_coding MGP_BALBcJ_T0023233.1 MGP_BALBcJ_G0016658.1 mouse_genomes_project 1 166690692 166846722 + MGP_BALBcJ_P0023233 Lmx1a protein_coding protein_coding MGP_BALBcJ_T0019629.1 MGP_BALBcJ_G0015936.1 mouse_genomes_project 1 43398996 43400062 + protein_coding retained_intron MGP_BALBcJ_T0009536.1 MGP_BALBcJ_G0007661.1 mouse_genomes_project 1 184828514 184828581 + Mir194-1 miRNA miRNA MGP_BALBcJ_T0021322.1 MGP_BALBcJ_G0016265.1 mouse_genomes_project 1 91297655 91299110 + MGP_BALBcJ_P0021322 Dusp28 protein_coding protein_coding MGP_BALBcJ_T0023105.1 MGP_BALBcJ_G0016631.1 mouse_genomes_project 1 164176280 164196798 - MGP_BALBcJ_P0023105 Sft2d2 protein_coding protein_coding MGP_BALBcJ_T0023106.1 MGP_BALBcJ_G0016631.1 mouse_genomes_project 1 164177814 164196681 - MGP_BALBcJ_P0023106 Sft2d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023107.1 MGP_BALBcJ_G0016631.1 mouse_genomes_project 1 164181181 164196677 - MGP_BALBcJ_P0023107 Sft2d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009464.1 MGP_BALBcJ_G0007589.1 mouse_genomes_project 1 52619267 52619372 + Gm24053 miRNA miRNA MGP_BALBcJ_T0099089.1 MGP_BALBcJ_G0037125.1 mouse_genomes_project 1 56327270 56327377 - Gm23966 snRNA snRNA MGP_BALBcJ_T0005802.1 MGP_BALBcJ_G0004868.1 mouse_genomes_project 1 87703870 87751121 - C030007H22Rik lincRNA lincRNA MGP_BALBcJ_T0005959.1 MGP_BALBcJ_G0004995.1 mouse_genomes_project 1 165375843 165377876 - Gm15853 lincRNA lincRNA MGP_BALBcJ_T0099106.1 MGP_BALBcJ_G0037142.1 mouse_genomes_project 1 85496364 85496471 - Gm22549 snRNA snRNA MGP_BALBcJ_T0019245.1 MGP_BALBcJ_G0015860.1 mouse_genomes_project 1 33658078 33708222 + MGP_BALBcJ_P0019245 Fer1l5 protein_coding protein_coding MGP_BALBcJ_T0019246.1 MGP_BALBcJ_G0015860.1 mouse_genomes_project 1 33671241 33690951 + MGP_BALBcJ_P0019246 Fer1l5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019247.1 MGP_BALBcJ_G0015860.1 mouse_genomes_project 1 33703002 33708225 + MGP_BALBcJ_P0019247 Fer1l5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011870.1 MGP_BALBcJ_G0009967.1 mouse_genomes_project 1 7935073 7935843 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0022153.1 MGP_BALBcJ_G0016447.1 mouse_genomes_project 1 133144312 133160011 - MGP_BALBcJ_P0022153 Tmem183a protein_coding protein_coding MGP_BALBcJ_T0022154.1 MGP_BALBcJ_G0016447.1 mouse_genomes_project 1 133145897 133159973 - MGP_BALBcJ_P0022154 Tmem183a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022155.1 MGP_BALBcJ_G0016447.1 mouse_genomes_project 1 133146125 133148623 - Tmem183a protein_coding retained_intron MGP_BALBcJ_T0022156.1 MGP_BALBcJ_G0016447.1 mouse_genomes_project 1 133153759 133159985 - Tmem183a protein_coding retained_intron MGP_BALBcJ_T0022157.1 MGP_BALBcJ_G0016447.1 mouse_genomes_project 1 133154025 133159722 - MGP_BALBcJ_P0022157 Tmem183a protein_coding protein_coding MGP_BALBcJ_T0009479.1 MGP_BALBcJ_G0007604.1 mouse_genomes_project 1 73193297 73193413 - Gm27943 miRNA miRNA MGP_BALBcJ_T0011982.1 MGP_BALBcJ_G0010079.1 mouse_genomes_project 1 42822929 42823453 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021607.1 MGP_BALBcJ_G0016329.1 mouse_genomes_project 1 115298319 115318746 + MGP_BALBcJ_P0021607 Gm19965 protein_coding protein_coding MGP_BALBcJ_T0000804.1 MGP_BALBcJ_G0000737.1 mouse_genomes_project 1 194801423 194804139 - TEC TEC MGP_BALBcJ_T0024146.1 MGP_BALBcJ_G0016873.1 mouse_genomes_project 1 190614213 190620953 + MGP_BALBcJ_P0024146 Spata45 protein_coding protein_coding MGP_BALBcJ_T0024147.1 MGP_BALBcJ_G0016873.1 mouse_genomes_project 1 190614393 190620960 + MGP_BALBcJ_P0024147 Spata45 protein_coding protein_coding MGP_BALBcJ_T0011965.1 MGP_BALBcJ_G0010062.1 mouse_genomes_project 1 38206485 38206981 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019709.1 MGP_BALBcJ_G0015949.1 mouse_genomes_project 1 50247365 50319077 - MGP_BALBcJ_P0019709 Mfsd6 protein_coding protein_coding MGP_BALBcJ_T0019710.1 MGP_BALBcJ_G0015949.1 mouse_genomes_project 1 50247377 50318771 - MGP_BALBcJ_P0019710 Mfsd6 protein_coding protein_coding MGP_BALBcJ_T0019711.1 MGP_BALBcJ_G0015949.1 mouse_genomes_project 1 50248513 50251348 - Mfsd6 protein_coding retained_intron MGP_BALBcJ_T0019712.1 MGP_BALBcJ_G0015949.1 mouse_genomes_project 1 50251035 50319077 - MGP_BALBcJ_P0019712 Mfsd6 protein_coding protein_coding MGP_BALBcJ_T0019713.1 MGP_BALBcJ_G0015949.1 mouse_genomes_project 1 50251953 50260481 - Mfsd6 protein_coding processed_transcript MGP_BALBcJ_T0019714.1 MGP_BALBcJ_G0015949.1 mouse_genomes_project 1 50266753 50318973 - Mfsd6 protein_coding retained_intron MGP_BALBcJ_T0000739.1 MGP_BALBcJ_G0000675.1 mouse_genomes_project 1 175489916 175492352 + TEC TEC MGP_BALBcJ_T0024099.1 MGP_BALBcJ_G0016865.1 mouse_genomes_project 1 189189519 189236916 - MGP_BALBcJ_P0024099 Cenpf protein_coding protein_coding MGP_BALBcJ_T0024100.1 MGP_BALBcJ_G0016865.1 mouse_genomes_project 1 189191609 189197770 - MGP_BALBcJ_P0024100 Cenpf protein_coding protein_coding MGP_BALBcJ_T0024101.1 MGP_BALBcJ_G0016865.1 mouse_genomes_project 1 189207554 189236916 - MGP_BALBcJ_P0024101 Cenpf protein_coding protein_coding MGP_BALBcJ_T0024102.1 MGP_BALBcJ_G0016865.1 mouse_genomes_project 1 189216587 189219976 - Cenpf protein_coding retained_intron MGP_BALBcJ_T0024103.1 MGP_BALBcJ_G0016865.1 mouse_genomes_project 1 189232659 189236865 - MGP_BALBcJ_P0024103 Cenpf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024104.1 MGP_BALBcJ_G0016865.1 mouse_genomes_project 1 189235893 189236916 - Cenpf protein_coding retained_intron MGP_BALBcJ_T0023626.1 MGP_BALBcJ_G0016765.1 mouse_genomes_project 1 173530375 173531463 - MGP_BALBcJ_P0023626 Olfr419 protein_coding protein_coding MGP_BALBcJ_T0023605.1 MGP_BALBcJ_G0016750.1 mouse_genomes_project 1 172898567 172916943 + MGP_BALBcJ_P0023605 protein_coding protein_coding MGP_BALBcJ_T0099039.1 MGP_BALBcJ_G0037079.1 mouse_genomes_project 1 103844409 103863534 - sense_overlapping sense_overlapping MGP_BALBcJ_T0019529.1 MGP_BALBcJ_G0015917.1 mouse_genomes_project 1 40505627 40546496 - MGP_BALBcJ_P0019529 Fhl2 protein_coding protein_coding MGP_BALBcJ_T0018993.1 MGP_BALBcJ_G0015808.1 mouse_genomes_project 1 17877130 17884255 - MGP_BALBcJ_P0018993 Il17f protein_coding protein_coding MGP_BALBcJ_T0018994.1 MGP_BALBcJ_G0015808.1 mouse_genomes_project 1 17877663 17879538 - Il17f protein_coding retained_intron MGP_BALBcJ_T0018995.1 MGP_BALBcJ_G0015808.1 mouse_genomes_project 1 17877767 17890468 - MGP_BALBcJ_P0018995 Il17f protein_coding protein_coding MGP_BALBcJ_T0018996.1 MGP_BALBcJ_G0015808.1 mouse_genomes_project 1 17887460 17890467 - Il17f protein_coding processed_transcript MGP_BALBcJ_T0012237.1 MGP_BALBcJ_G0010334.1 mouse_genomes_project 1 142027200 142028470 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0019944.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605942 56608821 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0019945.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605942 56647270 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0019946.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605950 56609238 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0019947.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605968 56608824 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0019948.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605978 56612375 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0019949.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605985 56646905 + MGP_BALBcJ_P0019949 Cflar protein_coding protein_coding MGP_BALBcJ_T0019950.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56605994 56651812 + MGP_BALBcJ_P0019950 Cflar protein_coding protein_coding MGP_BALBcJ_T0019951.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56608228 56627704 + MGP_BALBcJ_P0019951 Cflar protein_coding protein_coding MGP_BALBcJ_T0019952.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56608236 56617889 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0019953.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56608251 56648094 + MGP_BALBcJ_P0019953 Cflar protein_coding protein_coding MGP_BALBcJ_T0019954.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56608820 56612383 + Cflar protein_coding retained_intron MGP_BALBcJ_T0019955.1 MGP_BALBcJ_G0015995.1 mouse_genomes_project 1 56625113 56645382 + Cflar protein_coding processed_transcript MGP_BALBcJ_T0022517.1 MGP_BALBcJ_G0016520.1 mouse_genomes_project 1 149491654 149929026 - MGP_BALBcJ_P0022517 Hmcn1 protein_coding protein_coding MGP_BALBcJ_T0022518.1 MGP_BALBcJ_G0016520.1 mouse_genomes_project 1 149492657 149929026 - MGP_BALBcJ_P0022518 Hmcn1 protein_coding protein_coding MGP_BALBcJ_T0022519.1 MGP_BALBcJ_G0016520.1 mouse_genomes_project 1 149492814 149512446 - MGP_BALBcJ_P0022519 Hmcn1 protein_coding protein_coding MGP_BALBcJ_T0022520.1 MGP_BALBcJ_G0016520.1 mouse_genomes_project 1 149492841 149494735 - Hmcn1 protein_coding retained_intron MGP_BALBcJ_T0022521.1 MGP_BALBcJ_G0016520.1 mouse_genomes_project 1 149506668 149509849 - Hmcn1 protein_coding processed_transcript MGP_BALBcJ_T0022522.1 MGP_BALBcJ_G0016520.1 mouse_genomes_project 1 149809299 149929410 - Hmcn1 protein_coding retained_intron MGP_BALBcJ_T0020265.1 MGP_BALBcJ_G0016052.1 mouse_genomes_project 1 64666895 64680462 + MGP_BALBcJ_P0020265 Rpe protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020266.1 MGP_BALBcJ_G0016052.1 mouse_genomes_project 1 64666895 64685071 + MGP_BALBcJ_P0020266 Rpe protein_coding protein_coding MGP_BALBcJ_T0020267.1 MGP_BALBcJ_G0016052.1 mouse_genomes_project 1 64666895 64685071 + MGP_BALBcJ_P0020267 Rpe protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020268.1 MGP_BALBcJ_G0016052.1 mouse_genomes_project 1 64666895 64685071 + MGP_BALBcJ_P0020268 Rpe protein_coding protein_coding MGP_BALBcJ_T0020269.1 MGP_BALBcJ_G0016052.1 mouse_genomes_project 1 64666971 64683285 + MGP_BALBcJ_P0020269 Rpe protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019309.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34318619 34371569 + MGP_BALBcJ_P0019309 Vwa3b protein_coding protein_coding MGP_BALBcJ_T0019310.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34321314 34357986 + MGP_BALBcJ_P0019310 Vwa3b protein_coding non_stop_decay MGP_BALBcJ_T0019311.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34321326 34371568 + MGP_BALBcJ_P0019311 Vwa3b protein_coding protein_coding MGP_BALBcJ_T0019312.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34321394 34371298 + MGP_BALBcJ_P0019312 Vwa3b protein_coding protein_coding MGP_BALBcJ_T0019313.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34329628 34484659 + MGP_BALBcJ_P0019313 Vwa3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0019314.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34329674 34484819 + MGP_BALBcJ_P0019314 Vwa3b protein_coding unknown_likely_coding MGP_BALBcJ_T0019315.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34395729 34404272 + Vwa3b protein_coding retained_intron MGP_BALBcJ_T0019316.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34395866 34424723 + Vwa3b protein_coding processed_transcript MGP_BALBcJ_T0019317.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34431472 34437326 + MGP_BALBcJ_P0019317 Vwa3b protein_coding protein_coding MGP_BALBcJ_T0019318.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34449807 34485655 + MGP_BALBcJ_P0019318 Vwa3b protein_coding protein_coding MGP_BALBcJ_T0019319.1 MGP_BALBcJ_G0015872.1 mouse_genomes_project 1 34484904 34485663 + Vwa3b protein_coding retained_intron MGP_BALBcJ_T0021760.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124636423 125543290 - MGP_BALBcJ_P0021760 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021761.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124636423 125543290 - MGP_BALBcJ_P0021761 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021762.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124636423 125181364 - MGP_BALBcJ_P0021762 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021763.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124636434 125217012 - MGP_BALBcJ_P0021763 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021764.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124637106 124689699 - Nckap5 protein_coding processed_transcript MGP_BALBcJ_T0021765.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124637528 125178272 - MGP_BALBcJ_P0021765 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021766.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124637745 124747385 - MGP_BALBcJ_P0021766 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021767.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124752148 124759387 - Nckap5 protein_coding processed_transcript MGP_BALBcJ_T0021768.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124949792 125543457 - MGP_BALBcJ_P0021768 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021769.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 124985215 125456529 - MGP_BALBcJ_P0021769 Nckap5 protein_coding protein_coding MGP_BALBcJ_T0021770.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 125250851 125456517 - Nckap5 protein_coding retained_intron MGP_BALBcJ_T0021771.1 MGP_BALBcJ_G0016361.1 mouse_genomes_project 1 125253686 125543139 - Nckap5 protein_coding retained_intron MGP_BALBcJ_T0022660.1 MGP_BALBcJ_G0016549.1 mouse_genomes_project 1 153209780 153214283 + MGP_BALBcJ_P0022660 Zfp648 protein_coding protein_coding MGP_BALBcJ_T0000582.1 MGP_BALBcJ_G0000520.1 mouse_genomes_project 1 118424056 118432219 - TEC TEC MGP_BALBcJ_T0000700.1 MGP_BALBcJ_G0000636.1 mouse_genomes_project 1 159241043 159242910 + TEC TEC MGP_BALBcJ_T0000525.1 MGP_BALBcJ_G0000463.1 mouse_genomes_project 1 78758307 78760163 - TEC TEC MGP_BALBcJ_T0005901.1 MGP_BALBcJ_G0004950.1 mouse_genomes_project 1 137485986 137527482 - Gm5833 lincRNA lincRNA MGP_BALBcJ_T0005902.1 MGP_BALBcJ_G0004950.1 mouse_genomes_project 1 137516796 137527470 - Gm5833 lincRNA lincRNA MGP_BALBcJ_T0002764.1 MGP_BALBcJ_G0002628.1 mouse_genomes_project 1 35542858 35553016 + Gm16150 antisense antisense MGP_BALBcJ_T0002765.1 MGP_BALBcJ_G0002628.1 mouse_genomes_project 1 35547112 35554079 + Gm16150 antisense antisense MGP_BALBcJ_T0000381.1 MGP_BALBcJ_G0000322.1 mouse_genomes_project 1 11274318 11274757 - TEC TEC MGP_BALBcJ_T0012141.1 MGP_BALBcJ_G0010238.1 mouse_genomes_project 1 102969730 102970798 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011842.1 MGP_BALBcJ_G0009939.1 mouse_genomes_project 1 3410850 3411476 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018977.1 MGP_BALBcJ_G0015802.1 mouse_genomes_project 1 15297998 15298969 - MGP_BALBcJ_P0018977 Defb18 protein_coding protein_coding MGP_BALBcJ_T0012021.1 MGP_BALBcJ_G0010118.1 mouse_genomes_project 1 52989136 52990127 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018829.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7202555 7298494 - MGP_BALBcJ_P0018829 Arfgef1 protein_coding protein_coding MGP_BALBcJ_T0018830.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7203674 7206686 - Arfgef1 protein_coding retained_intron MGP_BALBcJ_T0018831.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7212383 7219509 - Arfgef1 protein_coding retained_intron MGP_BALBcJ_T0018832.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7221377 7225039 - Arfgef1 protein_coding retained_intron MGP_BALBcJ_T0018833.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7225735 7226285 - Arfgef1 protein_coding retained_intron MGP_BALBcJ_T0018834.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7238054 7298494 - MGP_BALBcJ_P0018834 Arfgef1 protein_coding protein_coding MGP_BALBcJ_T0018835.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7274311 7275473 - Arfgef1 protein_coding retained_intron MGP_BALBcJ_T0018836.1 MGP_BALBcJ_G0015772.1 mouse_genomes_project 1 7274526 7279579 - Arfgef1 protein_coding retained_intron MGP_BALBcJ_T0021894.1 MGP_BALBcJ_G0016390.1 mouse_genomes_project 1 129789838 129794959 + MGP_BALBcJ_P0021894 Il10 protein_coding protein_coding MGP_BALBcJ_T0023225.1 MGP_BALBcJ_G0016654.1 mouse_genomes_project 1 166345187 166364423 + MGP_BALBcJ_P0023225 Aldh9a1 protein_coding protein_coding MGP_BALBcJ_T0023226.1 MGP_BALBcJ_G0016654.1 mouse_genomes_project 1 166345432 166349637 + Aldh9a1 protein_coding processed_transcript MGP_BALBcJ_T0023227.1 MGP_BALBcJ_G0016654.1 mouse_genomes_project 1 166345508 166351039 + Aldh9a1 protein_coding retained_intron MGP_BALBcJ_T0023228.1 MGP_BALBcJ_G0016654.1 mouse_genomes_project 1 166360041 166363538 + Aldh9a1 protein_coding retained_intron MGP_BALBcJ_T0012046.1 MGP_BALBcJ_G0010143.1 mouse_genomes_project 1 60073481 60073740 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020098.1 MGP_BALBcJ_G0016020.1 mouse_genomes_project 1 59610904 60055428 + Pard3b protein_coding processed_transcript MGP_BALBcJ_T0020099.1 MGP_BALBcJ_G0016020.1 mouse_genomes_project 1 59610904 60607313 + MGP_BALBcJ_P0020099 Pard3b protein_coding protein_coding MGP_BALBcJ_T0020100.1 MGP_BALBcJ_G0016020.1 mouse_genomes_project 1 59610955 59740377 + Pard3b protein_coding retained_intron MGP_BALBcJ_T0020101.1 MGP_BALBcJ_G0016020.1 mouse_genomes_project 1 59610966 60140776 + Pard3b protein_coding retained_intron MGP_BALBcJ_T0020102.1 MGP_BALBcJ_G0016020.1 mouse_genomes_project 1 59611323 60602954 + MGP_BALBcJ_P0020102 Pard3b protein_coding protein_coding MGP_BALBcJ_T0020103.1 MGP_BALBcJ_G0016020.1 mouse_genomes_project 1 59611323 60607313 + MGP_BALBcJ_P0020103 Pard3b protein_coding protein_coding MGP_BALBcJ_T0023273.1 MGP_BALBcJ_G0016667.1 mouse_genomes_project 1 169194157 169215501 - MGP_BALBcJ_P0023273 Uhmk1 protein_coding protein_coding MGP_BALBcJ_T0023274.1 MGP_BALBcJ_G0016667.1 mouse_genomes_project 1 169200604 169216007 - MGP_BALBcJ_P0023274 Uhmk1 protein_coding protein_coding MGP_BALBcJ_T0020443.1 MGP_BALBcJ_G0016089.1 mouse_genomes_project 1 72449153 72475367 + MGP_BALBcJ_P0020443 Vil1 protein_coding protein_coding MGP_BALBcJ_T0020444.1 MGP_BALBcJ_G0016089.1 mouse_genomes_project 1 72454845 72474799 + MGP_BALBcJ_P0020444 Vil1 protein_coding unknown_likely_coding MGP_BALBcJ_T0020445.1 MGP_BALBcJ_G0016089.1 mouse_genomes_project 1 72458860 72462826 + MGP_BALBcJ_P0020445 Vil1 protein_coding protein_coding MGP_BALBcJ_T0020446.1 MGP_BALBcJ_G0016089.1 mouse_genomes_project 1 72461223 72462819 + Vil1 protein_coding retained_intron MGP_BALBcJ_T0020447.1 MGP_BALBcJ_G0016089.1 mouse_genomes_project 1 72463493 72465774 + Vil1 protein_coding retained_intron MGP_BALBcJ_T0000686.1 MGP_BALBcJ_G0000622.1 mouse_genomes_project 1 155550232 155555620 + TEC TEC MGP_BALBcJ_T0020048.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58052358 58108776 + MGP_BALBcJ_P0020048 Carf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020049.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58052375 58063083 + Carf protein_coding retained_intron MGP_BALBcJ_T0020050.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58052375 58082285 + MGP_BALBcJ_P0020050 Carf protein_coding protein_coding MGP_BALBcJ_T0020051.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58055327 58058511 + Carf protein_coding retained_intron MGP_BALBcJ_T0020052.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58056700 58111974 + MGP_BALBcJ_P0020052 Carf protein_coding unknown_likely_coding MGP_BALBcJ_T0020053.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58062123 58108544 + MGP_BALBcJ_P0020053 Carf protein_coding protein_coding MGP_BALBcJ_T0020054.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58062123 58108544 + MGP_BALBcJ_P0020054 Carf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0020055.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58097169 58099585 + Carf protein_coding retained_intron MGP_BALBcJ_T0020056.1 MGP_BALBcJ_G0016012.1 mouse_genomes_project 1 58098821 58105770 + MGP_BALBcJ_P0020056 Carf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0022070.1 MGP_BALBcJ_G0016426.1 mouse_genomes_project 1 132098167 132117904 + MGP_BALBcJ_P0022070 protein_coding protein_coding MGP_BALBcJ_T0022071.1 MGP_BALBcJ_G0016426.1 mouse_genomes_project 1 132098167 132117938 + MGP_BALBcJ_P0022071 protein_coding protein_coding MGP_BALBcJ_T0022076.1 MGP_BALBcJ_G0016426.1 mouse_genomes_project 1 132112181 132117938 + MGP_BALBcJ_P0022076 protein_coding protein_coding MGP_BALBcJ_T0023230.1 MGP_BALBcJ_G0016656.1 mouse_genomes_project 1 166447564 166469226 - MGP_BALBcJ_P0023230 Lrrc52 protein_coding protein_coding MGP_BALBcJ_T0099092.1 MGP_BALBcJ_G0037128.1 mouse_genomes_project 1 61571638 61571741 - Gm22281 snRNA snRNA MGP_BALBcJ_T0023278.1 MGP_BALBcJ_G0016670.1 mouse_genomes_project 1 169299131 169307231 - MGP_BALBcJ_P0023278 Gm7694 protein_coding protein_coding MGP_BALBcJ_T0000589.1 MGP_BALBcJ_G0000527.1 mouse_genomes_project 1 122042343 122045853 - TEC TEC MGP_BALBcJ_T0020183.1 MGP_BALBcJ_G0016035.1 mouse_genomes_project 1 62681453 62716640 + MGP_BALBcJ_P0020183 Ccnyl1 protein_coding protein_coding MGP_BALBcJ_T0020184.1 MGP_BALBcJ_G0016035.1 mouse_genomes_project 1 62681820 62714942 + MGP_BALBcJ_P0020184 Ccnyl1 protein_coding protein_coding MGP_BALBcJ_T0020185.1 MGP_BALBcJ_G0016035.1 mouse_genomes_project 1 62682181 62702452 + MGP_BALBcJ_P0020185 Ccnyl1 protein_coding protein_coding MGP_BALBcJ_T0020186.1 MGP_BALBcJ_G0016035.1 mouse_genomes_project 1 62682343 62716636 + MGP_BALBcJ_P0020186 Ccnyl1 protein_coding protein_coding MGP_BALBcJ_T0000666.1 MGP_BALBcJ_G0000602.1 mouse_genomes_project 1 148352303 148353759 - TEC TEC MGP_BALBcJ_T0011238.1 MGP_BALBcJ_G0009363.1 mouse_genomes_project 1 184372790 184373065 - Gm23780 misc_RNA misc_RNA MGP_BALBcJ_T0012326.1 MGP_BALBcJ_G0010423.1 mouse_genomes_project 1 180824413 180827277 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000638.1 MGP_BALBcJ_G0000575.1 mouse_genomes_project 1 136607953 136611400 - TEC TEC MGP_BALBcJ_T0012348.1 MGP_BALBcJ_G0010445.1 mouse_genomes_project 1 192418855 192419338 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012086.1 MGP_BALBcJ_G0010183.1 mouse_genomes_project 1 77999495 77999973 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012204.1 MGP_BALBcJ_G0010301.1 mouse_genomes_project 1 125765490 125767109 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098427.1 MGP_BALBcJ_G0036481.1 mouse_genomes_project 1 87908673 87908788 + Gm25180 rRNA rRNA MGP_BALBcJ_T0022511.1 MGP_BALBcJ_G0016519.1 mouse_genomes_project 1 149378863 149394117 - MGP_BALBcJ_P0022511 Prg4 protein_coding protein_coding MGP_BALBcJ_T0022512.1 MGP_BALBcJ_G0016519.1 mouse_genomes_project 1 149378863 149394117 - MGP_BALBcJ_P0022512 Prg4 protein_coding protein_coding MGP_BALBcJ_T0022513.1 MGP_BALBcJ_G0016519.1 mouse_genomes_project 1 149379267 149394684 - MGP_BALBcJ_P0022513 Prg4 protein_coding protein_coding MGP_BALBcJ_T0022514.1 MGP_BALBcJ_G0016519.1 mouse_genomes_project 1 149379330 149394688 - MGP_BALBcJ_P0022514 Prg4 protein_coding unknown_likely_coding MGP_BALBcJ_T0022515.1 MGP_BALBcJ_G0016519.1 mouse_genomes_project 1 149384515 149394684 - MGP_BALBcJ_P0022515 Prg4 protein_coding protein_coding MGP_BALBcJ_T0022516.1 MGP_BALBcJ_G0016519.1 mouse_genomes_project 1 149386710 149394684 - MGP_BALBcJ_P0022516 Prg4 protein_coding protein_coding MGP_BALBcJ_T0098431.1 MGP_BALBcJ_G0036485.1 mouse_genomes_project 1 133957346 133957447 - Gm26280 rRNA rRNA MGP_BALBcJ_T0023318.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170174410 170189677 + MGP_BALBcJ_P0023318 Cfap126 protein_coding protein_coding MGP_BALBcJ_T0023319.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170174481 170189627 + MGP_BALBcJ_P0023319 Cfap126 protein_coding protein_coding MGP_BALBcJ_T0023320.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170184578 170189815 + MGP_BALBcJ_P0023320 Cfap126 protein_coding protein_coding MGP_BALBcJ_T0023321.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170184581 170186074 + Cfap126 protein_coding processed_transcript MGP_BALBcJ_T0023322.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170185594 170188884 + MGP_BALBcJ_P0023322 Cfap126 protein_coding protein_coding MGP_BALBcJ_T0023323.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170186091 170188928 + MGP_BALBcJ_P0023323 Cfap126 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023324.1 MGP_BALBcJ_G0016682.1 mouse_genomes_project 1 170187893 170189507 + MGP_BALBcJ_P0023324 Cfap126 protein_coding protein_coding MGP_BALBcJ_T0011963.1 MGP_BALBcJ_G0010060.1 mouse_genomes_project 1 36632183 36632738 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005974.1 MGP_BALBcJ_G0005009.1 mouse_genomes_project 1 176900552 176906056 - Gm37280 lincRNA lincRNA MGP_BALBcJ_T0000406.1 MGP_BALBcJ_G0000345.1 mouse_genomes_project 1 22792429 22795374 - TEC TEC MGP_BALBcJ_T0022357.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136906009 136960418 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022358.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136906555 137020213 - MGP_BALBcJ_P0022358 Ptprc protein_coding protein_coding MGP_BALBcJ_T0022359.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136906561 137020174 - MGP_BALBcJ_P0022359 Ptprc protein_coding protein_coding MGP_BALBcJ_T0022360.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136906568 137020207 - MGP_BALBcJ_P0022360 Ptprc protein_coding protein_coding MGP_BALBcJ_T0022361.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136956006 136959451 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022362.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136956228 137020141 - MGP_BALBcJ_P0022362 Ptprc protein_coding protein_coding MGP_BALBcJ_T0022363.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136961313 136964697 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022364.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136961814 137020207 - MGP_BALBcJ_P0022364 Ptprc protein_coding protein_coding MGP_BALBcJ_T0022365.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136963449 137020206 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022366.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136967741 137020203 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022367.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 136970982 137020615 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022368.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 137016883 137020096 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0022369.1 MGP_BALBcJ_G0016488.1 mouse_genomes_project 1 137017650 137020156 - Ptprc protein_coding retained_intron MGP_BALBcJ_T0021987.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130956941 131034429 + MGP_BALBcJ_P0021987 Lemd1 protein_coding protein_coding MGP_BALBcJ_T0021988.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130956965 131032584 + MGP_BALBcJ_P0021988 Lemd1 protein_coding protein_coding MGP_BALBcJ_T0021989.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130956967 130975065 + Lemd1 protein_coding processed_transcript MGP_BALBcJ_T0021990.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130966480 130971301 + Lemd1 protein_coding processed_transcript MGP_BALBcJ_T0021991.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130969369 130970027 + Lemd1 protein_coding processed_transcript MGP_BALBcJ_T0021992.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130996541 131032391 + MGP_BALBcJ_P0021992 Lemd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021993.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130996570 131032211 + MGP_BALBcJ_P0021993 Lemd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021994.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130998720 131000155 + Lemd1 protein_coding retained_intron MGP_BALBcJ_T0021995.1 MGP_BALBcJ_G0016410.1 mouse_genomes_project 1 130998720 131032236 + MGP_BALBcJ_P0021995 Lemd1 protein_coding protein_coding MGP_BALBcJ_T0021196.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89374441 89491297 + MGP_BALBcJ_P0021196 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021197.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89374481 89505169 + MGP_BALBcJ_P0021197 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021198.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89374483 89511551 + MGP_BALBcJ_P0021198 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021199.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89434805 89511555 + MGP_BALBcJ_P0021199 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021200.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89434815 89499931 + MGP_BALBcJ_P0021200 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021201.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89434868 89483162 + MGP_BALBcJ_P0021201 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021202.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89434868 89511529 + MGP_BALBcJ_P0021202 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021203.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89434947 89510898 + MGP_BALBcJ_P0021203 Lrrfip1 protein_coding protein_coding MGP_BALBcJ_T0021204.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89467127 89498686 + MGP_BALBcJ_P0021204 Lrrfip1 protein_coding unknown_likely_coding MGP_BALBcJ_T0021205.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89493751 89497474 + Lrrfip1 protein_coding processed_transcript MGP_BALBcJ_T0021206.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89493751 89499537 + Lrrfip1 protein_coding processed_transcript MGP_BALBcJ_T0021207.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89502575 89505155 + Lrrfip1 protein_coding processed_transcript MGP_BALBcJ_T0021208.1 MGP_BALBcJ_G0016237.1 mouse_genomes_project 1 89508009 89510789 + Lrrfip1 protein_coding retained_intron MGP_BALBcJ_T0021165.1 MGP_BALBcJ_G0016230.1 mouse_genomes_project 1 88401759 88513006 - MGP_BALBcJ_P0021165 Iqca protein_coding protein_coding MGP_BALBcJ_T0021166.1 MGP_BALBcJ_G0016230.1 mouse_genomes_project 1 88401762 88449878 - Iqca protein_coding processed_transcript MGP_BALBcJ_T0021167.1 MGP_BALBcJ_G0016230.1 mouse_genomes_project 1 88402253 88512780 - MGP_BALBcJ_P0021167 Iqca protein_coding unknown_likely_coding MGP_BALBcJ_T0021168.1 MGP_BALBcJ_G0016230.1 mouse_genomes_project 1 88419100 88426542 - MGP_BALBcJ_P0021168 Iqca protein_coding protein_coding MGP_BALBcJ_T0021169.1 MGP_BALBcJ_G0016230.1 mouse_genomes_project 1 88485570 88513006 - Iqca protein_coding processed_transcript MGP_BALBcJ_T0020817.1 MGP_BALBcJ_G0016152.1 mouse_genomes_project 1 80268798 80271620 + MGP_BALBcJ_P0020817 Gm9747 protein_coding protein_coding MGP_BALBcJ_T0021134.1 MGP_BALBcJ_G0016219.1 mouse_genomes_project 1 86442419 86443470 - MGP_BALBcJ_P0021134 Dnajb3 protein_coding protein_coding MGP_BALBcJ_T0000762.1 MGP_BALBcJ_G0000697.1 mouse_genomes_project 1 181233733 181237546 - TEC TEC MGP_BALBcJ_T0023740.1 MGP_BALBcJ_G0016793.1 mouse_genomes_project 1 178023489 178210069 + Kif26b protein_coding retained_intron MGP_BALBcJ_T0023741.1 MGP_BALBcJ_G0016793.1 mouse_genomes_project 1 178023489 178436279 + MGP_BALBcJ_P0023741 Kif26b protein_coding protein_coding MGP_BALBcJ_T0023742.1 MGP_BALBcJ_G0016793.1 mouse_genomes_project 1 178292654 178429935 + MGP_BALBcJ_P0023742 Kif26b protein_coding protein_coding MGP_BALBcJ_T0023853.1 MGP_BALBcJ_G0016812.1 mouse_genomes_project 1 180362489 180379505 + MGP_BALBcJ_P0023853 Sde2 protein_coding protein_coding MGP_BALBcJ_T0023854.1 MGP_BALBcJ_G0016812.1 mouse_genomes_project 1 180373491 180377645 + Sde2 protein_coding retained_intron MGP_BALBcJ_T0020448.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72475318 72547864 - MGP_BALBcJ_P0020448 Usp37 protein_coding protein_coding MGP_BALBcJ_T0020449.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72477687 72586635 - MGP_BALBcJ_P0020449 Usp37 protein_coding protein_coding MGP_BALBcJ_T0020450.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72479079 72509753 - Usp37 protein_coding processed_transcript MGP_BALBcJ_T0020451.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72490631 72547846 - Usp37 protein_coding retained_intron MGP_BALBcJ_T0020452.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72537993 72547867 - MGP_BALBcJ_P0020452 Usp37 protein_coding protein_coding MGP_BALBcJ_T0020453.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72542147 72547852 - Usp37 protein_coding retained_intron MGP_BALBcJ_T0020454.1 MGP_BALBcJ_G0016090.1 mouse_genomes_project 1 72542231 72548344 - Usp37 protein_coding processed_transcript MGP_BALBcJ_T0012066.1 MGP_BALBcJ_G0010163.1 mouse_genomes_project 1 64923380 64925021 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005742.1 MGP_BALBcJ_G0004824.1 mouse_genomes_project 1 67437129 67440158 + Gm28497 lincRNA lincRNA MGP_BALBcJ_T0000650.1 MGP_BALBcJ_G0000586.1 mouse_genomes_project 1 137413336 137416996 - TEC TEC MGP_BALBcJ_T0005791.1 MGP_BALBcJ_G0004858.1 mouse_genomes_project 1 85247491 85248254 + lincRNA lincRNA MGP_BALBcJ_T0023045.1 MGP_BALBcJ_G0016614.1 mouse_genomes_project 1 162715974 162733089 - MGP_BALBcJ_P0023045 Mettl11b protein_coding protein_coding MGP_BALBcJ_T0023046.1 MGP_BALBcJ_G0016614.1 mouse_genomes_project 1 162716717 162733089 - MGP_BALBcJ_P0023046 Mettl11b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099076.1 MGP_BALBcJ_G0037112.1 mouse_genomes_project 1 28908526 28908633 - Gm23032 snRNA snRNA MGP_BALBcJ_T0020772.1 MGP_BALBcJ_G0016142.1 mouse_genomes_project 1 77455356 77460809 - MGP_BALBcJ_P0020772 Scg2 protein_coding protein_coding MGP_BALBcJ_T0020773.1 MGP_BALBcJ_G0016142.1 mouse_genomes_project 1 77455356 77460731 - MGP_BALBcJ_P0020773 Scg2 protein_coding protein_coding MGP_BALBcJ_T0023333.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277928 170282807 + MGP_BALBcJ_P0023333 Nr1i3 protein_coding protein_coding MGP_BALBcJ_T0023334.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277929 170282805 + MGP_BALBcJ_P0023334 Nr1i3 protein_coding protein_coding MGP_BALBcJ_T0023335.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277944 170284664 + MGP_BALBcJ_P0023335 Nr1i3 protein_coding protein_coding MGP_BALBcJ_T0023336.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277952 170282963 + Nr1i3 protein_coding retained_intron MGP_BALBcJ_T0023337.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277960 170282807 + MGP_BALBcJ_P0023337 Nr1i3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023338.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277979 170283155 + Nr1i3 protein_coding retained_intron MGP_BALBcJ_T0023339.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170277979 170282806 + MGP_BALBcJ_P0023339 Nr1i3 protein_coding protein_coding MGP_BALBcJ_T0023340.1 MGP_BALBcJ_G0016686.1 mouse_genomes_project 1 170278310 170282680 + Nr1i3 protein_coding retained_intron MGP_BALBcJ_T0022468.1 MGP_BALBcJ_G0016511.1 mouse_genomes_project 1 143374817 143425879 - Rgs21 protein_coding processed_transcript MGP_BALBcJ_T0022469.1 MGP_BALBcJ_G0016511.1 mouse_genomes_project 1 143376778 143409775 - MGP_BALBcJ_P0022469 Rgs21 protein_coding protein_coding MGP_BALBcJ_T0022655.1 MGP_BALBcJ_G0016548.1 mouse_genomes_project 1 152908367 152918610 + MGP_BALBcJ_P0022655 Glul protein_coding protein_coding MGP_BALBcJ_T0022656.1 MGP_BALBcJ_G0016548.1 mouse_genomes_project 1 152909029 152916027 + MGP_BALBcJ_P0022656 Glul protein_coding protein_coding MGP_BALBcJ_T0022657.1 MGP_BALBcJ_G0016548.1 mouse_genomes_project 1 152909539 152915243 + MGP_BALBcJ_P0022657 Glul protein_coding protein_coding MGP_BALBcJ_T0022658.1 MGP_BALBcJ_G0016548.1 mouse_genomes_project 1 152912684 152915916 + Glul protein_coding processed_transcript MGP_BALBcJ_T0022659.1 MGP_BALBcJ_G0016548.1 mouse_genomes_project 1 152914929 152916003 + Glul protein_coding retained_intron MGP_BALBcJ_T0002800.1 MGP_BALBcJ_G0002655.1 mouse_genomes_project 1 60426732 60470296 - Pard3bos3 antisense antisense MGP_BALBcJ_T0019185.1 MGP_BALBcJ_G0015849.1 mouse_genomes_project 1 31799257 31808814 + MGP_BALBcJ_P0019185 Cfc1 protein_coding protein_coding MGP_BALBcJ_T0099096.1 MGP_BALBcJ_G0037132.1 mouse_genomes_project 1 66380372 66380466 - Gm25542 snRNA snRNA MGP_BALBcJ_T0000520.1 MGP_BALBcJ_G0000458.1 mouse_genomes_project 1 78177161 78178990 - TEC TEC MGP_BALBcJ_T0000741.1 MGP_BALBcJ_G0000677.1 mouse_genomes_project 1 176045887 176047306 - TEC TEC MGP_BALBcJ_T0000717.1 MGP_BALBcJ_G0000653.1 mouse_genomes_project 1 162124638 162126621 + TEC TEC MGP_BALBcJ_T0002916.1 MGP_BALBcJ_G0002742.1 mouse_genomes_project 1 162001830 162082592 + Gm37273 antisense antisense MGP_BALBcJ_T0019609.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43099398 43127822 + MGP_BALBcJ_P0019609 Wdr75 protein_coding protein_coding MGP_BALBcJ_T0019610.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43099681 43127807 + Wdr75 protein_coding retained_intron MGP_BALBcJ_T0019611.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43099735 43106574 + Wdr75 protein_coding retained_intron MGP_BALBcJ_T0019612.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43099739 43108148 + MGP_BALBcJ_P0019612 Wdr75 protein_coding protein_coding MGP_BALBcJ_T0019613.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43106207 43127718 + Wdr75 protein_coding processed_transcript MGP_BALBcJ_T0019614.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43107904 43109666 + Wdr75 protein_coding processed_transcript MGP_BALBcJ_T0019615.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43118880 43127822 + Wdr75 protein_coding retained_intron MGP_BALBcJ_T0019616.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43126467 43127716 + Wdr75 protein_coding retained_intron MGP_BALBcJ_T0019617.1 MGP_BALBcJ_G0015932.1 mouse_genomes_project 1 43126760 43127819 + MGP_BALBcJ_P0019617 Wdr75 protein_coding protein_coding MGP_BALBcJ_T0019630.1 MGP_BALBcJ_G0015937.1 mouse_genomes_project 1 43409108 43412916 + protein_coding processed_transcript MGP_BALBcJ_T0019363.1 MGP_BALBcJ_G0015880.1 mouse_genomes_project 1 35165250 35168856 + MGP_BALBcJ_P0019363 Lipt1 protein_coding protein_coding MGP_BALBcJ_T0019364.1 MGP_BALBcJ_G0015880.1 mouse_genomes_project 1 35165718 35169741 + MGP_BALBcJ_P0019364 Lipt1 protein_coding protein_coding MGP_BALBcJ_T0019365.1 MGP_BALBcJ_G0015880.1 mouse_genomes_project 1 35165886 35168973 + MGP_BALBcJ_P0019365 Lipt1 protein_coding protein_coding MGP_BALBcJ_T0019366.1 MGP_BALBcJ_G0015880.1 mouse_genomes_project 1 35166074 35169067 + MGP_BALBcJ_P0019366 Lipt1 protein_coding protein_coding MGP_BALBcJ_T0023539.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598164 171605938 + MGP_BALBcJ_P0023539 Igsf9 protein_coding protein_coding MGP_BALBcJ_T0023540.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598574 171608003 + MGP_BALBcJ_P0023540 Igsf9 protein_coding protein_coding MGP_BALBcJ_T0023541.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598581 171605975 + Igsf9 protein_coding processed_transcript MGP_BALBcJ_T0023542.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598590 171615233 + MGP_BALBcJ_P0023542 Igsf9 protein_coding protein_coding MGP_BALBcJ_T0023543.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598595 171606158 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0023544.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598595 171607389 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0023545.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598606 171615233 + MGP_BALBcJ_P0023545 Igsf9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023546.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171598689 171615234 + MGP_BALBcJ_P0023546 Igsf9 protein_coding protein_coding MGP_BALBcJ_T0023547.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171607448 171608342 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0023548.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171608325 171611229 + MGP_BALBcJ_P0023548 Igsf9 protein_coding protein_coding MGP_BALBcJ_T0023549.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171610296 171612091 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0023550.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171610323 171612117 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0023551.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171611121 171612579 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0023552.1 MGP_BALBcJ_G0016729.1 mouse_genomes_project 1 171614148 171614970 + Igsf9 protein_coding retained_intron MGP_BALBcJ_T0102047.1 MGP_BALBcJ_G0039864.1 mouse_genomes_project 1 18287771 18296184 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005796.1 MGP_BALBcJ_G0004863.1 mouse_genomes_project 1 86992449 86994242 + Gm29336 lincRNA lincRNA MGP_BALBcJ_T0012335.1 MGP_BALBcJ_G0010432.1 mouse_genomes_project 1 186509363 186510653 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012134.1 MGP_BALBcJ_G0010231.1 mouse_genomes_project 1 99794029 99794478 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021467.1 MGP_BALBcJ_G0016294.1 mouse_genomes_project 1 93742096 93763753 + MGP_BALBcJ_P0021467 Fam174a protein_coding protein_coding MGP_BALBcJ_T0021468.1 MGP_BALBcJ_G0016294.1 mouse_genomes_project 1 93742101 93756419 + MGP_BALBcJ_P0021468 Fam174a protein_coding protein_coding MGP_BALBcJ_T0012239.1 MGP_BALBcJ_G0010336.1 mouse_genomes_project 1 143173438 143173843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0021450.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92237540 92239089 + MGP_BALBcJ_P0021450 protein_coding protein_coding MGP_BALBcJ_T0021451.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92237871 92272621 + MGP_BALBcJ_P0021451 protein_coding protein_coding MGP_BALBcJ_T0021452.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92237905 92272621 + MGP_BALBcJ_P0021452 protein_coding protein_coding MGP_BALBcJ_T0021453.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92238913 92244421 + protein_coding processed_transcript MGP_BALBcJ_T0021454.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92238915 92250713 + MGP_BALBcJ_P0021454 protein_coding protein_coding MGP_BALBcJ_T0021455.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92239192 92244830 + protein_coding processed_transcript MGP_BALBcJ_T0021456.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92242442 92250623 + MGP_BALBcJ_P0021456 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0021457.1 MGP_BALBcJ_G0016288.1 mouse_genomes_project 1 92242443 92252397 + MGP_BALBcJ_P0021457 protein_coding protein_coding MGP_BALBcJ_T0000758.1 MGP_BALBcJ_G0000693.1 mouse_genomes_project 1 179870322 179871194 + TEC TEC MGP_BALBcJ_T0011893.1 MGP_BALBcJ_G0009990.1 mouse_genomes_project 1 16132640 16132919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000390.1 MGP_BALBcJ_G0000331.1 mouse_genomes_project 1 18343837 18345926 + TEC TEC MGP_BALBcJ_T0009438.1 MGP_BALBcJ_G0007563.1 mouse_genomes_project 1 5844204 5844314 + Gm24276 miRNA miRNA MGP_BALBcJ_T0000418.1 MGP_BALBcJ_G0000357.1 mouse_genomes_project 1 25788978 25790492 + TEC TEC MGP_BALBcJ_T0098437.1 MGP_BALBcJ_G0036491.1 mouse_genomes_project 1 160597068 160597186 - Gm25488 rRNA rRNA MGP_BALBcJ_T0000618.1 MGP_BALBcJ_G0000556.1 mouse_genomes_project 1 129859420 129865251 - TEC TEC MGP_BALBcJ_T0024055.1 MGP_BALBcJ_G0016858.1 mouse_genomes_project 1 186516639 186519851 + MGP_BALBcJ_P0024055 D1Pas1 protein_coding protein_coding MGP_BALBcJ_T0006032.1 MGP_BALBcJ_G0005052.1 mouse_genomes_project 1 191082092 191085088 - Gm37432 lincRNA lincRNA MGP_BALBcJ_T0100374.1 MGP_BALBcJ_G0038410.1 mouse_genomes_project 1 117081491 117081622 - Gm26080 snoRNA snoRNA MGP_BALBcJ_T0000511.1 MGP_BALBcJ_G0000449.1 mouse_genomes_project 1 72347882 72350748 + TEC TEC MGP_BALBcJ_T0021897.1 MGP_BALBcJ_G0016392.1 mouse_genomes_project 1 129902332 129914816 - MGP_BALBcJ_P0021897 Dyrk3 protein_coding protein_coding MGP_BALBcJ_T0021898.1 MGP_BALBcJ_G0016392.1 mouse_genomes_project 1 129904752 129914721 - MGP_BALBcJ_P0021898 Dyrk3 protein_coding protein_coding MGP_BALBcJ_T0009502.1 MGP_BALBcJ_G0007627.1 mouse_genomes_project 1 114902727 114902799 - Gm23393 miRNA miRNA MGP_BALBcJ_T0012039.1 MGP_BALBcJ_G0010136.1 mouse_genomes_project 1 58760517 58761344 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012188.1 MGP_BALBcJ_G0010285.1 mouse_genomes_project 1 118623329 118623849 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100340.1 MGP_BALBcJ_G0038376.1 mouse_genomes_project 1 50683032 50683133 + Gm24349 snoRNA snoRNA MGP_BALBcJ_T0000472.1 MGP_BALBcJ_G0000410.1 mouse_genomes_project 1 56692605 56696454 + TEC TEC MGP_BALBcJ_T0000344.1 MGP_BALBcJ_G0000285.1 mouse_genomes_project 1 396121 398354 - TEC TEC MGP_BALBcJ_T0023875.1 MGP_BALBcJ_G0016818.1 mouse_genomes_project 1 180585624 180595066 + MGP_BALBcJ_P0023875 9130409I23Rik protein_coding protein_coding MGP_BALBcJ_T0012178.1 MGP_BALBcJ_G0010275.1 mouse_genomes_project 1 117106501 117107489 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0020857.1 MGP_BALBcJ_G0016161.1 mouse_genomes_project 1 81242268 81244669 + MGP_BALBcJ_P0020857 Ccl20 protein_coding protein_coding MGP_BALBcJ_T0020858.1 MGP_BALBcJ_G0016161.1 mouse_genomes_project 1 81242276 81244670 + MGP_BALBcJ_P0020858 Ccl20 protein_coding protein_coding MGP_BALBcJ_T0020859.1 MGP_BALBcJ_G0016161.1 mouse_genomes_project 1 81242295 81244670 + MGP_BALBcJ_P0020859 Ccl20 protein_coding protein_coding MGP_BALBcJ_T0006033.1 MGP_BALBcJ_G0005053.1 mouse_genomes_project 1 192370754 192371820 + 1700065J18Rik lincRNA lincRNA MGP_BALBcJ_T0006034.1 MGP_BALBcJ_G0005053.1 mouse_genomes_project 1 192370764 192371826 + 1700065J18Rik lincRNA lincRNA MGP_BALBcJ_T0098783.1 MGP_BALBcJ_G0036837.1 mouse_genomes_project 1 35382667 35383678 - Gm37062 sense_intronic sense_intronic MGP_BALBcJ_T0002955.1 MGP_BALBcJ_G0002774.1 mouse_genomes_project 1 184755774 184759934 - Gm34882 antisense antisense MGP_BALBcJ_T0098432.1 MGP_BALBcJ_G0036486.1 mouse_genomes_project 1 136831512 136831632 - Gm23782 rRNA rRNA MGP_BALBcJ_T0101831.1 MGP_BALBcJ_G0039758.1 mouse_genomes_project 1 95792734 95908755 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101832.1 MGP_BALBcJ_G0039758.1 mouse_genomes_project 1 95898364 96014299 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0012161.1 MGP_BALBcJ_G0010258.1 mouse_genomes_project 1 109055391 109056213 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102093.1 MGP_BALBcJ_G0039910.1 mouse_genomes_project 1 172192725 172193025 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098296.1 MGP_BALBcJ_G0036350.1 mouse_genomes_project 1 31995102 31996051 + pseudogene pseudogene MGP_BALBcJ_T0009505.1 MGP_BALBcJ_G0007630.1 mouse_genomes_project 1 130267173 130267337 - Gm24273 miRNA miRNA MGP_BALBcJ_T0100336.1 MGP_BALBcJ_G0038372.1 mouse_genomes_project 1 40243689 40243823 - Gm23126 snoRNA snoRNA MGP_BALBcJ_T0023835.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180147748 180197179 + MGP_BALBcJ_P0023835 Lin9 protein_coding protein_coding MGP_BALBcJ_T0023836.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180147932 180197186 + MGP_BALBcJ_P0023836 Lin9 protein_coding protein_coding MGP_BALBcJ_T0023837.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180147951 180188101 + Lin9 protein_coding retained_intron MGP_BALBcJ_T0023838.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180147953 180155792 + Lin9 protein_coding processed_transcript MGP_BALBcJ_T0023839.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180147958 180197179 + MGP_BALBcJ_P0023839 Lin9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023840.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180147964 180181661 + Lin9 protein_coding retained_intron MGP_BALBcJ_T0023841.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180168217 180180713 + MGP_BALBcJ_P0023841 Lin9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023842.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180185934 180195361 + Lin9 protein_coding retained_intron MGP_BALBcJ_T0023843.1 MGP_BALBcJ_G0016808.1 mouse_genomes_project 1 180187361 180197179 + Lin9 protein_coding retained_intron MGP_BALBcJ_T0023485.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171197207 171236406 + MGP_BALBcJ_P0023485 Copa protein_coding protein_coding MGP_BALBcJ_T0023486.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171197321 171208193 + Copa protein_coding retained_intron MGP_BALBcJ_T0023487.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171197483 171224978 + MGP_BALBcJ_P0023487 Copa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023488.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171197509 171218887 + Copa protein_coding retained_intron MGP_BALBcJ_T0023489.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171197510 171236411 + MGP_BALBcJ_P0023489 Copa protein_coding protein_coding MGP_BALBcJ_T0023490.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171209882 171215905 + Copa protein_coding processed_transcript MGP_BALBcJ_T0023491.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171214376 171220418 + MGP_BALBcJ_P0023491 Copa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0023492.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171226218 171229597 + Copa protein_coding retained_intron MGP_BALBcJ_T0023493.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171228365 171236409 + Copa protein_coding retained_intron MGP_BALBcJ_T0023494.1 MGP_BALBcJ_G0016717.1 mouse_genomes_project 1 171232227 171233466 + Copa protein_coding retained_intron MGP_BALBcJ_T0059818.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180682275 180689769 - MGP_BALBcJ_P0059818 Arfrp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059819.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180682331 180684587 - Arfrp1 protein_coding retained_intron MGP_BALBcJ_T0059820.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180683761 180689761 - Arfrp1 protein_coding retained_intron MGP_BALBcJ_T0059821.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180683874 180689747 - Arfrp1 protein_coding retained_intron MGP_BALBcJ_T0059822.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180683920 180689753 - MGP_BALBcJ_P0059822 Arfrp1 protein_coding protein_coding MGP_BALBcJ_T0059823.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180683948 180689238 - Arfrp1 protein_coding retained_intron MGP_BALBcJ_T0059824.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180684155 180689788 - Arfrp1 protein_coding retained_intron MGP_BALBcJ_T0059825.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180684161 180689765 - MGP_BALBcJ_P0059825 Arfrp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059826.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180685895 180689694 - Arfrp1 protein_coding processed_transcript MGP_BALBcJ_T0059827.1 MGP_BALBcJ_G0026995.1 mouse_genomes_project 2 180688716 180689778 - Arfrp1 protein_coding retained_intron MGP_BALBcJ_T0102417.1 MGP_BALBcJ_G0040233.1 mouse_genomes_project 2 85542141 85543063 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0059423.1 MGP_BALBcJ_G0026902.1 mouse_genomes_project 2 167248575 167269803 - MGP_BALBcJ_P0059423 Kcng1 protein_coding protein_coding MGP_BALBcJ_T0059424.1 MGP_BALBcJ_G0026902.1 mouse_genomes_project 2 167250156 167258003 - MGP_BALBcJ_P0059424 Kcng1 protein_coding protein_coding MGP_BALBcJ_T0059425.1 MGP_BALBcJ_G0026902.1 mouse_genomes_project 2 167257770 167270407 - MGP_BALBcJ_P0059425 Kcng1 protein_coding protein_coding MGP_BALBcJ_T0017771.1 MGP_BALBcJ_G0015382.1 mouse_genomes_project 2 88986409 88993418 - Gm13783 processed_transcript processed_transcript MGP_BALBcJ_T0059118.1 MGP_BALBcJ_G0026836.1 mouse_genomes_project 2 163490988 163508065 - MGP_BALBcJ_P0059118 Wfdc8 protein_coding protein_coding MGP_BALBcJ_T0059119.1 MGP_BALBcJ_G0026836.1 mouse_genomes_project 2 163490996 163507825 - MGP_BALBcJ_P0059119 Wfdc8 protein_coding protein_coding MGP_BALBcJ_T0059120.1 MGP_BALBcJ_G0026836.1 mouse_genomes_project 2 163491742 163508065 - MGP_BALBcJ_P0059120 Wfdc8 protein_coding protein_coding MGP_BALBcJ_T0013674.1 MGP_BALBcJ_G0011771.1 mouse_genomes_project 2 102819319 102819663 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058938.1 MGP_BALBcJ_G0026782.1 mouse_genomes_project 2 159594298 159712984 - Zhx3 protein_coding processed_transcript MGP_BALBcJ_T0058946.1 MGP_BALBcJ_G0026782.1 mouse_genomes_project 2 159610775 159712558 - MGP_BALBcJ_P0058946 Zhx3 protein_coding protein_coding MGP_BALBcJ_T0058947.1 MGP_BALBcJ_G0026782.1 mouse_genomes_project 2 159611372 159696250 - MGP_BALBcJ_P0058947 Zhx3 protein_coding protein_coding MGP_BALBcJ_T0058948.1 MGP_BALBcJ_G0026782.1 mouse_genomes_project 2 159616063 159712976 - MGP_BALBcJ_P0058948 Zhx3 protein_coding protein_coding MGP_BALBcJ_T0058949.1 MGP_BALBcJ_G0026782.1 mouse_genomes_project 2 159627494 159712815 - MGP_BALBcJ_P0058949 Zhx3 protein_coding protein_coding MGP_BALBcJ_T0058950.1 MGP_BALBcJ_G0026782.1 mouse_genomes_project 2 159627531 159712976 - MGP_BALBcJ_P0058950 Zhx3 protein_coding protein_coding MGP_BALBcJ_T0055979.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826395 88831829 + MGP_BALBcJ_P0055979 Psmc3 protein_coding protein_coding MGP_BALBcJ_T0055980.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826441 88838756 + MGP_BALBcJ_P0055980 Psmc3 protein_coding protein_coding MGP_BALBcJ_T0055981.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826481 88828322 + Psmc3 protein_coding processed_transcript MGP_BALBcJ_T0055982.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826486 88831829 + MGP_BALBcJ_P0055982 Psmc3 protein_coding protein_coding MGP_BALBcJ_T0055983.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826664 88830232 + MGP_BALBcJ_P0055983 Psmc3 protein_coding protein_coding MGP_BALBcJ_T0055984.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826687 88829383 + MGP_BALBcJ_P0055984 Psmc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055985.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826768 88828105 + Psmc3 protein_coding processed_transcript MGP_BALBcJ_T0055986.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826864 88827940 + Psmc3 protein_coding processed_transcript MGP_BALBcJ_T0055987.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88826959 88828315 + Psmc3 protein_coding processed_transcript MGP_BALBcJ_T0055988.1 MGP_BALBcJ_G0026109.1 mouse_genomes_project 2 88830495 88831831 + Psmc3 protein_coding processed_transcript MGP_BALBcJ_T0010401.1 MGP_BALBcJ_G0008526.1 mouse_genomes_project 2 65142637 65142697 + Mir7224 miRNA miRNA MGP_BALBcJ_T0098755.1 MGP_BALBcJ_G0036809.1 mouse_genomes_project 2 104773037 104773160 + Gm22813 scaRNA scaRNA MGP_BALBcJ_T0053365.1 MGP_BALBcJ_G0025467.1 mouse_genomes_project 2 23760843 23768967 + MGP_BALBcJ_P0053365 Fam69b protein_coding protein_coding MGP_BALBcJ_T0053366.1 MGP_BALBcJ_G0025467.1 mouse_genomes_project 2 23760880 23765477 + Fam69b protein_coding processed_transcript MGP_BALBcJ_T0053367.1 MGP_BALBcJ_G0025467.1 mouse_genomes_project 2 23766672 23767495 + Fam69b protein_coding processed_transcript MGP_BALBcJ_T0004004.1 MGP_BALBcJ_G0003564.1 mouse_genomes_project 2 72264704 72265513 - Gm28793 antisense antisense MGP_BALBcJ_T0053959.1 MGP_BALBcJ_G0025564.1 mouse_genomes_project 2 29061854 29066302 - MGP_BALBcJ_P0053959 Qrfp protein_coding protein_coding MGP_BALBcJ_T0059196.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163866854 163868818 + MGP_BALBcJ_P0059196 Slc12a5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059197.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163866868 163880866 + Slc12a5 protein_coding processed_transcript MGP_BALBcJ_T0059198.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163866876 163904803 + MGP_BALBcJ_P0059198 Slc12a5 protein_coding protein_coding MGP_BALBcJ_T0059199.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163866898 163906938 + MGP_BALBcJ_P0059199 Slc12a5 protein_coding protein_coding MGP_BALBcJ_T0059200.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163874425 163906947 + MGP_BALBcJ_P0059200 Slc12a5 protein_coding protein_coding MGP_BALBcJ_T0059201.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163874681 163906943 + MGP_BALBcJ_P0059201 Slc12a5 protein_coding protein_coding MGP_BALBcJ_T0059202.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163874723 163896407 + MGP_BALBcJ_P0059202 Slc12a5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059203.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163888574 163892785 + Slc12a5 protein_coding retained_intron MGP_BALBcJ_T0059204.1 MGP_BALBcJ_G0026860.1 mouse_genomes_project 2 163903824 163906938 + Slc12a5 protein_coding retained_intron MGP_BALBcJ_T0056316.1 MGP_BALBcJ_G0026159.1 mouse_genomes_project 2 99527082 99535096 + MGP_BALBcJ_P0056316 Rag2 protein_coding protein_coding MGP_BALBcJ_T0056317.1 MGP_BALBcJ_G0026159.1 mouse_genomes_project 2 99527110 99533620 + MGP_BALBcJ_P0056317 Rag2 protein_coding protein_coding MGP_BALBcJ_T0054829.1 MGP_BALBcJ_G0025726.1 mouse_genomes_project 2 56851554 56872233 + MGP_BALBcJ_P0054829 Dapl1 protein_coding protein_coding MGP_BALBcJ_T0054830.1 MGP_BALBcJ_G0025726.1 mouse_genomes_project 2 56851570 56872233 + Dapl1 protein_coding processed_transcript MGP_BALBcJ_T0010361.1 MGP_BALBcJ_G0008486.1 mouse_genomes_project 2 16977031 16977107 + Gm44457 miRNA miRNA MGP_BALBcJ_T0010344.1 MGP_BALBcJ_G0008469.1 mouse_genomes_project 2 7516641 7516738 + Gm26092 miRNA miRNA MGP_BALBcJ_T0007157.1 MGP_BALBcJ_G0005866.1 mouse_genomes_project 2 31273136 31275215 + Gm13404 lincRNA lincRNA MGP_BALBcJ_T0007398.1 MGP_BALBcJ_G0006064.1 mouse_genomes_project 2 170280984 170283432 + Gm14640 lincRNA lincRNA MGP_BALBcJ_T0017881.1 MGP_BALBcJ_G0015433.1 mouse_genomes_project 2 171030734 171036590 - 1700028P15Rik processed_transcript lincRNA MGP_BALBcJ_T0017882.1 MGP_BALBcJ_G0015433.1 mouse_genomes_project 2 171032041 171035922 - 1700028P15Rik processed_transcript lincRNA MGP_BALBcJ_T0017883.1 MGP_BALBcJ_G0015433.1 mouse_genomes_project 2 171032042 171036615 - 1700028P15Rik processed_transcript retained_intron MGP_BALBcJ_T0056645.1 MGP_BALBcJ_G0026262.1 mouse_genomes_project 2 110278416 110413928 + MGP_BALBcJ_P0056645 Gm21985 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057093.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119186978 119191699 + Adal protein_coding retained_intron MGP_BALBcJ_T0057094.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119186989 119203325 + MGP_BALBcJ_P0057094 Adal protein_coding protein_coding MGP_BALBcJ_T0057095.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119186994 119191697 + Adal protein_coding retained_intron MGP_BALBcJ_T0057096.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119187003 119196981 + Adal protein_coding processed_transcript MGP_BALBcJ_T0057097.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119187049 119202236 + MGP_BALBcJ_P0057097 Adal protein_coding protein_coding MGP_BALBcJ_T0057098.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119187071 119197169 + Adal protein_coding retained_intron MGP_BALBcJ_T0057099.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119188451 119203331 + MGP_BALBcJ_P0057099 Adal protein_coding protein_coding MGP_BALBcJ_T0057100.1 MGP_BALBcJ_G0026356.1 mouse_genomes_project 2 119196744 119202986 + Adal protein_coding retained_intron MGP_BALBcJ_T0017880.1 MGP_BALBcJ_G0015432.1 mouse_genomes_project 2 167771190 167773157 + Gm14261 processed_transcript processed_transcript MGP_BALBcJ_T0001029.1 MGP_BALBcJ_G0000957.1 mouse_genomes_project 2 9449377 9451989 - TEC TEC MGP_BALBcJ_T0017873.1 MGP_BALBcJ_G0015427.1 mouse_genomes_project 2 160378072 160378395 - Gm29229 processed_transcript processed_transcript MGP_BALBcJ_T0056775.1 MGP_BALBcJ_G0026293.1 mouse_genomes_project 2 116728697 116733558 - MGP_BALBcJ_P0056775 Ankrd63 protein_coding protein_coding MGP_BALBcJ_T0055779.1 MGP_BALBcJ_G0025984.1 mouse_genomes_project 2 85251792 85253094 - MGP_BALBcJ_P0055779 Olfr1128 protein_coding protein_coding MGP_BALBcJ_T0056212.1 MGP_BALBcJ_G0026141.1 mouse_genomes_project 2 90745899 90787034 + MGP_BALBcJ_P0056212 Syt13 protein_coding protein_coding MGP_BALBcJ_T0010400.1 MGP_BALBcJ_G0008525.1 mouse_genomes_project 2 62809418 62809523 - Mir6337 miRNA miRNA MGP_BALBcJ_T0098868.1 MGP_BALBcJ_G0036916.1 mouse_genomes_project 2 18014383 18023909 - Gm13380 sense_intronic sense_intronic MGP_BALBcJ_T0011472.1 MGP_BALBcJ_G0009597.1 mouse_genomes_project 2 33400479 33400622 - Gm27953 misc_RNA misc_RNA MGP_BALBcJ_T0013519.1 MGP_BALBcJ_G0011616.1 mouse_genomes_project 2 49989918 49990201 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052777.1 MGP_BALBcJ_G0025360.1 mouse_genomes_project 2 18278904 18308838 - MGP_BALBcJ_P0052777 Enkur protein_coding protein_coding MGP_BALBcJ_T0052778.1 MGP_BALBcJ_G0025360.1 mouse_genomes_project 2 18297415 18308712 - Enkur protein_coding processed_transcript MGP_BALBcJ_T0052779.1 MGP_BALBcJ_G0025360.1 mouse_genomes_project 2 18299750 18308825 - Enkur protein_coding processed_transcript MGP_BALBcJ_T0003892.1 MGP_BALBcJ_G0003481.1 mouse_genomes_project 2 16529409 16538216 - antisense antisense MGP_BALBcJ_T0010445.1 MGP_BALBcJ_G0008570.1 mouse_genomes_project 2 143143948 143144039 - Gm24823 miRNA miRNA MGP_BALBcJ_T0099672.1 MGP_BALBcJ_G0037708.1 mouse_genomes_project 2 36341744 36341851 + Gm26127 snRNA snRNA MGP_BALBcJ_T0007317.1 MGP_BALBcJ_G0005996.1 mouse_genomes_project 2 135771857 135812757 + Gm14055 lincRNA lincRNA MGP_BALBcJ_T0055812.1 MGP_BALBcJ_G0026014.1 mouse_genomes_project 2 85803154 85804105 - MGP_BALBcJ_P0055812 Olfr1163 protein_coding protein_coding MGP_BALBcJ_T0100950.1 MGP_BALBcJ_G0038986.1 mouse_genomes_project 2 52011597 52011736 - Gm24549 snoRNA snoRNA MGP_BALBcJ_T0056638.1 MGP_BALBcJ_G0026258.1 mouse_genomes_project 2 110251343 110258995 + MGP_BALBcJ_P0056638 Lpcat4 protein_coding protein_coding MGP_BALBcJ_T0056639.1 MGP_BALBcJ_G0026258.1 mouse_genomes_project 2 110253369 110255960 + Lpcat4 protein_coding processed_transcript MGP_BALBcJ_T0056640.1 MGP_BALBcJ_G0026258.1 mouse_genomes_project 2 110253856 110254646 + Lpcat4 protein_coding processed_transcript MGP_BALBcJ_T0056641.1 MGP_BALBcJ_G0026258.1 mouse_genomes_project 2 110256484 110258876 + Lpcat4 protein_coding processed_transcript MGP_BALBcJ_T0003969.1 MGP_BALBcJ_G0003539.1 mouse_genomes_project 2 62304727 62305038 + antisense antisense MGP_BALBcJ_T0054109.1 MGP_BALBcJ_G0025585.1 mouse_genomes_project 2 29846904 29848405 - MGP_BALBcJ_P0054109 9430097D07Rik protein_coding protein_coding MGP_BALBcJ_T0013418.1 MGP_BALBcJ_G0011515.1 mouse_genomes_project 2 14230552 14231358 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013754.1 MGP_BALBcJ_G0011851.1 mouse_genomes_project 2 137881862 137882371 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055884.1 MGP_BALBcJ_G0026076.1 mouse_genomes_project 2 87392935 87393880 - MGP_BALBcJ_P0055884 Olfr1247 protein_coding protein_coding MGP_BALBcJ_T0055885.1 MGP_BALBcJ_G0026076.1 mouse_genomes_project 2 87392935 87397827 - MGP_BALBcJ_P0055885 Olfr1247 protein_coding protein_coding MGP_BALBcJ_T0055886.1 MGP_BALBcJ_G0026076.1 mouse_genomes_project 2 87393636 87395425 - MGP_BALBcJ_P0055886 Olfr1247 protein_coding protein_coding MGP_BALBcJ_T0013502.1 MGP_BALBcJ_G0011599.1 mouse_genomes_project 2 45740343 45740597 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017854.1 MGP_BALBcJ_G0015421.1 mouse_genomes_project 2 155486869 155493180 - 4930405A21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017855.1 MGP_BALBcJ_G0015421.1 mouse_genomes_project 2 155488281 155493097 - 4930405A21Rik processed_transcript retained_intron MGP_BALBcJ_T0017782.1 MGP_BALBcJ_G0015389.1 mouse_genomes_project 2 102500891 102509735 + Platr14 processed_transcript processed_transcript MGP_BALBcJ_T0017783.1 MGP_BALBcJ_G0015389.1 mouse_genomes_project 2 102500907 102509732 + Platr14 processed_transcript processed_transcript MGP_BALBcJ_T0017784.1 MGP_BALBcJ_G0015389.1 mouse_genomes_project 2 102500912 102513108 + Platr14 processed_transcript processed_transcript MGP_BALBcJ_T0017785.1 MGP_BALBcJ_G0015389.1 mouse_genomes_project 2 102500920 102509808 + Platr14 processed_transcript processed_transcript MGP_BALBcJ_T0017786.1 MGP_BALBcJ_G0015389.1 mouse_genomes_project 2 102501187 102509729 + Platr14 processed_transcript processed_transcript MGP_BALBcJ_T0017787.1 MGP_BALBcJ_G0015389.1 mouse_genomes_project 2 102508875 102510511 + Platr14 processed_transcript processed_transcript MGP_BALBcJ_T0058990.1 MGP_BALBcJ_G0026791.1 mouse_genomes_project 2 161872750 161900995 + MGP_BALBcJ_P0058990 Ift52 protein_coding protein_coding MGP_BALBcJ_T0058991.1 MGP_BALBcJ_G0026791.1 mouse_genomes_project 2 161872887 161886625 + MGP_BALBcJ_P0058991 Ift52 protein_coding protein_coding MGP_BALBcJ_T0058992.1 MGP_BALBcJ_G0026791.1 mouse_genomes_project 2 161872915 161878939 + Ift52 protein_coding processed_transcript MGP_BALBcJ_T0058993.1 MGP_BALBcJ_G0026791.1 mouse_genomes_project 2 161877840 161883790 + Ift52 protein_coding processed_transcript MGP_BALBcJ_T0007313.1 MGP_BALBcJ_G0005992.1 mouse_genomes_project 2 134113030 134116262 + Platr3 lincRNA lincRNA MGP_BALBcJ_T0058766.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155705888 155773471 - MGP_BALBcJ_P0058766 Ndrg3 protein_coding protein_coding MGP_BALBcJ_T0058767.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155705888 155773484 - MGP_BALBcJ_P0058767 Ndrg3 protein_coding protein_coding MGP_BALBcJ_T0058768.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155706946 155723964 - Ndrg3 protein_coding processed_transcript MGP_BALBcJ_T0058769.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155709695 155714218 - Ndrg3 protein_coding processed_transcript MGP_BALBcJ_T0058770.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155713515 155773463 - MGP_BALBcJ_P0058770 Ndrg3 protein_coding protein_coding MGP_BALBcJ_T0058771.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155718362 155733291 - Ndrg3 protein_coding processed_transcript MGP_BALBcJ_T0058772.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155725915 155773428 - Ndrg3 protein_coding processed_transcript MGP_BALBcJ_T0058773.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155728158 155773355 - Ndrg3 protein_coding processed_transcript MGP_BALBcJ_T0058774.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155736240 155773475 - Ndrg3 protein_coding retained_intron MGP_BALBcJ_T0058775.1 MGP_BALBcJ_G0026747.1 mouse_genomes_project 2 155750390 155773424 - Ndrg3 protein_coding processed_transcript MGP_BALBcJ_T0055928.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88505054 88545907 + MGP_BALBcJ_P0055928 Fnbp4 protein_coding protein_coding MGP_BALBcJ_T0055929.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88505288 88541370 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055930.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88518056 88522381 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055931.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88522530 88528702 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055932.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88523333 88532773 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055933.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88528389 88532994 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055934.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88533022 88541264 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055935.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88533579 88541353 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0055936.1 MGP_BALBcJ_G0026101.1 mouse_genomes_project 2 88540437 88541261 + Fnbp4 protein_coding processed_transcript MGP_BALBcJ_T0010326.1 MGP_BALBcJ_G0008451.1 mouse_genomes_project 2 7494773 7494854 + Mir669d-2 miRNA miRNA MGP_BALBcJ_T0099701.1 MGP_BALBcJ_G0037737.1 mouse_genomes_project 2 131791340 131791399 + Gm27449 snRNA snRNA MGP_BALBcJ_T0010405.1 MGP_BALBcJ_G0008530.1 mouse_genomes_project 2 72294479 72294547 + Mir10b miRNA miRNA MGP_BALBcJ_T0052333.1 MGP_BALBcJ_G0025288.1 mouse_genomes_project 2 1672921 1753997 + MGP_BALBcJ_P0052333 Bend7 protein_coding protein_coding MGP_BALBcJ_T0052334.1 MGP_BALBcJ_G0025288.1 mouse_genomes_project 2 1672924 1742367 + MGP_BALBcJ_P0052334 Bend7 protein_coding protein_coding MGP_BALBcJ_T0052335.1 MGP_BALBcJ_G0025288.1 mouse_genomes_project 2 1673235 1754359 + MGP_BALBcJ_P0052335 Bend7 protein_coding protein_coding MGP_BALBcJ_T0052336.1 MGP_BALBcJ_G0025288.1 mouse_genomes_project 2 1706127 1755576 + Bend7 protein_coding processed_transcript MGP_BALBcJ_T0056961.1 MGP_BALBcJ_G0026337.1 mouse_genomes_project 2 118356990 118369427 - Pla2g4f protein_coding retained_intron MGP_BALBcJ_T0056962.1 MGP_BALBcJ_G0026337.1 mouse_genomes_project 2 118356999 118371177 - MGP_BALBcJ_P0056962 Pla2g4f protein_coding protein_coding MGP_BALBcJ_T0054676.1 MGP_BALBcJ_G0025693.1 mouse_genomes_project 2 46904447 47000032 + MGP_BALBcJ_P0054676 Epc2 protein_coding protein_coding MGP_BALBcJ_T0054677.1 MGP_BALBcJ_G0025693.1 mouse_genomes_project 2 46976958 46985165 + MGP_BALBcJ_P0054677 Epc2 protein_coding protein_coding MGP_BALBcJ_T0057655.1 MGP_BALBcJ_G0026486.1 mouse_genomes_project 2 128984429 129025191 - MGP_BALBcJ_P0057655 Ubox5 protein_coding protein_coding MGP_BALBcJ_T0057656.1 MGP_BALBcJ_G0026486.1 mouse_genomes_project 2 128995186 129025180 - MGP_BALBcJ_P0057656 Ubox5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001014.1 MGP_BALBcJ_G0000942.1 mouse_genomes_project 2 3460044 3463699 + TEC TEC MGP_BALBcJ_T0013839.1 MGP_BALBcJ_G0011936.1 mouse_genomes_project 2 163538211 163538467 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056528.1 MGP_BALBcJ_G0026201.1 mouse_genomes_project 2 103656879 103860879 - MGP_BALBcJ_P0056528 Elp4 protein_coding protein_coding MGP_BALBcJ_T0056529.1 MGP_BALBcJ_G0026201.1 mouse_genomes_project 2 103686669 103818802 - MGP_BALBcJ_P0056529 Elp4 protein_coding protein_coding MGP_BALBcJ_T0056530.1 MGP_BALBcJ_G0026201.1 mouse_genomes_project 2 103752449 103774631 - Elp4 protein_coding retained_intron MGP_BALBcJ_T0056531.1 MGP_BALBcJ_G0026201.1 mouse_genomes_project 2 103818889 103860798 - Elp4 protein_coding processed_transcript MGP_BALBcJ_T0057137.1 MGP_BALBcJ_G0026360.1 mouse_genomes_project 2 119335393 119356952 + MGP_BALBcJ_P0057137 Map1a protein_coding protein_coding MGP_BALBcJ_T0057138.1 MGP_BALBcJ_G0026360.1 mouse_genomes_project 2 119335563 119336837 + Map1a protein_coding processed_transcript MGP_BALBcJ_T0057139.1 MGP_BALBcJ_G0026360.1 mouse_genomes_project 2 119341530 119355547 + MGP_BALBcJ_P0057139 Map1a protein_coding protein_coding MGP_BALBcJ_T0057140.1 MGP_BALBcJ_G0026360.1 mouse_genomes_project 2 119341539 119353730 + Map1a protein_coding processed_transcript MGP_BALBcJ_T0057840.1 MGP_BALBcJ_G0026521.1 mouse_genomes_project 2 131246373 131260528 + MGP_BALBcJ_P0057840 Chgb protein_coding protein_coding MGP_BALBcJ_T0052830.1 MGP_BALBcJ_G0025370.1 mouse_genomes_project 2 20165548 20209064 + MGP_BALBcJ_P0052830 Yme1l1 protein_coding protein_coding MGP_BALBcJ_T0052831.1 MGP_BALBcJ_G0025370.1 mouse_genomes_project 2 20165697 20186287 + Yme1l1 protein_coding processed_transcript MGP_BALBcJ_T0052832.1 MGP_BALBcJ_G0025370.1 mouse_genomes_project 2 20165707 20169795 + Yme1l1 protein_coding processed_transcript MGP_BALBcJ_T0052833.1 MGP_BALBcJ_G0025370.1 mouse_genomes_project 2 20166012 20173765 + Yme1l1 protein_coding processed_transcript MGP_BALBcJ_T0052834.1 MGP_BALBcJ_G0025370.1 mouse_genomes_project 2 20177560 20182815 + Yme1l1 protein_coding processed_transcript MGP_BALBcJ_T0052835.1 MGP_BALBcJ_G0025370.1 mouse_genomes_project 2 20202664 20204901 + Yme1l1 protein_coding processed_transcript MGP_BALBcJ_T0007214.1 MGP_BALBcJ_G0005913.1 mouse_genomes_project 2 72316985 72319070 - Haglr lincRNA lincRNA MGP_BALBcJ_T0007215.1 MGP_BALBcJ_G0005913.1 mouse_genomes_project 2 72318996 72331559 - Haglr lincRNA lincRNA MGP_BALBcJ_T0003891.1 MGP_BALBcJ_G0003480.1 mouse_genomes_project 2 16517019 16519899 - Gm13344 antisense antisense MGP_BALBcJ_T0052929.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22056168 22139267 + MGP_BALBcJ_P0052929 Pnpla7 protein_coding protein_coding MGP_BALBcJ_T0052930.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22056208 22139267 + MGP_BALBcJ_P0052930 Pnpla7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052931.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22056223 22062314 + MGP_BALBcJ_P0052931 Pnpla7 protein_coding protein_coding MGP_BALBcJ_T0052932.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22056224 22077130 + MGP_BALBcJ_P0052932 Pnpla7 protein_coding protein_coding MGP_BALBcJ_T0052933.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22056236 22060382 + Pnpla7 protein_coding processed_transcript MGP_BALBcJ_T0052934.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22056283 22124643 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0052935.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22062394 22068468 + Pnpla7 protein_coding processed_transcript MGP_BALBcJ_T0052936.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22077484 22080622 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0052937.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22078098 22094420 + MGP_BALBcJ_P0052937 Pnpla7 protein_coding protein_coding MGP_BALBcJ_T0052938.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22124861 22139267 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0052939.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22136561 22137300 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0052940.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22136875 22138978 + MGP_BALBcJ_P0052940 Pnpla7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052941.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22136930 22137546 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0052942.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22137117 22138061 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0052943.1 MGP_BALBcJ_G0025390.1 mouse_genomes_project 2 22138363 22139065 + Pnpla7 protein_coding retained_intron MGP_BALBcJ_T0055782.1 MGP_BALBcJ_G0025987.1 mouse_genomes_project 2 85296872 85318288 + MGP_BALBcJ_P0055782 Olfr1129 protein_coding protein_coding MGP_BALBcJ_T0102426.1 MGP_BALBcJ_G0040242.1 mouse_genomes_project 2 86486312 86487373 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0057335.1 MGP_BALBcJ_G0026404.1 mouse_genomes_project 2 123746511 123749304 + MGP_BALBcJ_P0057335 Gm9913 protein_coding protein_coding MGP_BALBcJ_T0052677.1 MGP_BALBcJ_G0025345.1 mouse_genomes_project 2 15110390 15114287 - Skida1 protein_coding processed_transcript MGP_BALBcJ_T0052678.1 MGP_BALBcJ_G0025345.1 mouse_genomes_project 2 15113797 15118757 - MGP_BALBcJ_P0052678 Skida1 protein_coding protein_coding MGP_BALBcJ_T0052679.1 MGP_BALBcJ_G0025345.1 mouse_genomes_project 2 15114967 15118164 - MGP_BALBcJ_P0052679 Skida1 protein_coding protein_coding MGP_BALBcJ_T0052680.1 MGP_BALBcJ_G0025345.1 mouse_genomes_project 2 15117430 15118490 - MGP_BALBcJ_P0052680 Skida1 protein_coding protein_coding MGP_BALBcJ_T0052681.1 MGP_BALBcJ_G0025345.1 mouse_genomes_project 2 15117858 15118737 - MGP_BALBcJ_P0052681 Skida1 protein_coding protein_coding MGP_BALBcJ_T0057633.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128810345 128817270 - Pced1a protein_coding processed_transcript MGP_BALBcJ_T0057634.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128810781 128817300 - MGP_BALBcJ_P0057634 Pced1a protein_coding protein_coding MGP_BALBcJ_T0057635.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128811299 128817303 - Pced1a protein_coding processed_transcript MGP_BALBcJ_T0057636.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128811323 128817288 - Pced1a protein_coding retained_intron MGP_BALBcJ_T0057637.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128812057 128817709 - MGP_BALBcJ_P0057637 Pced1a protein_coding protein_coding MGP_BALBcJ_T0057638.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128812068 128817723 - Pced1a protein_coding retained_intron MGP_BALBcJ_T0057639.1 MGP_BALBcJ_G0026480.1 mouse_genomes_project 2 128814916 128817332 - Pced1a protein_coding retained_intron MGP_BALBcJ_T0011483.1 MGP_BALBcJ_G0009608.1 mouse_genomes_project 2 71401345 71401512 - Gm27421 misc_RNA misc_RNA MGP_BALBcJ_T0013662.1 MGP_BALBcJ_G0011759.1 mouse_genomes_project 2 100114747 100115715 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013524.1 MGP_BALBcJ_G0011621.1 mouse_genomes_project 2 51721700 51723175 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057341.1 MGP_BALBcJ_G0026407.1 mouse_genomes_project 2 123914209 123915900 + MGP_BALBcJ_P0057341 Eid1 protein_coding protein_coding MGP_BALBcJ_T0059357.1 MGP_BALBcJ_G0026886.1 mouse_genomes_project 2 166145264 166200465 - MGP_BALBcJ_P0059357 Ptgis protein_coding protein_coding MGP_BALBcJ_T0059358.1 MGP_BALBcJ_G0026886.1 mouse_genomes_project 2 166157270 166200480 - MGP_BALBcJ_P0059358 Ptgis protein_coding protein_coding MGP_BALBcJ_T0059359.1 MGP_BALBcJ_G0026886.1 mouse_genomes_project 2 166160885 166162780 - Ptgis protein_coding retained_intron MGP_BALBcJ_T0058040.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144304783 144342922 + MGP_BALBcJ_P0058040 Rin2 protein_coding protein_coding MGP_BALBcJ_T0058041.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144306029 144412532 + MGP_BALBcJ_P0058041 Rin2 protein_coding protein_coding MGP_BALBcJ_T0058042.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144306165 144412532 + MGP_BALBcJ_P0058042 Rin2 protein_coding protein_coding MGP_BALBcJ_T0058043.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144306211 144343324 + MGP_BALBcJ_P0058043 Rin2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058044.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144342769 144365437 + Rin2 protein_coding processed_transcript MGP_BALBcJ_T0058045.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144342908 144365706 + Rin2 protein_coding processed_transcript MGP_BALBcJ_T0058046.1 MGP_BALBcJ_G0026570.1 mouse_genomes_project 2 144383384 144403887 + Rin2 protein_coding processed_transcript MGP_BALBcJ_T0057786.1 MGP_BALBcJ_G0026510.1 mouse_genomes_project 2 130355723 130371892 + MGP_BALBcJ_P0057786 Prnp protein_coding protein_coding MGP_BALBcJ_T0057787.1 MGP_BALBcJ_G0026510.1 mouse_genomes_project 2 130355737 130363954 + Prnp protein_coding processed_transcript MGP_BALBcJ_T0056623.1 MGP_BALBcJ_G0026243.1 mouse_genomes_project 2 109768842 109769790 + MGP_BALBcJ_P0056623 Olfr1302 protein_coding protein_coding MGP_BALBcJ_T0056211.1 MGP_BALBcJ_G0026140.1 mouse_genomes_project 2 90423322 90439423 + MGP_BALBcJ_P0056211 Chst1 protein_coding protein_coding MGP_BALBcJ_T0059406.1 MGP_BALBcJ_G0026897.1 mouse_genomes_project 2 167064551 167084751 + MGP_BALBcJ_P0059406 Pard6b protein_coding protein_coding MGP_BALBcJ_T0101671.1 MGP_BALBcJ_G0039663.1 mouse_genomes_project 2 110000940 110002065 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0004058.1 MGP_BALBcJ_G0003600.1 mouse_genomes_project 2 123518333 123520922 + A530010F05Rik antisense antisense MGP_BALBcJ_T0055846.1 MGP_BALBcJ_G0026047.1 mouse_genomes_project 2 86778666 86786611 - MGP_BALBcJ_P0055846 protein_coding protein_coding MGP_BALBcJ_T0055847.1 MGP_BALBcJ_G0026047.1 mouse_genomes_project 2 86779165 86786586 - protein_coding processed_transcript MGP_BALBcJ_T0055848.1 MGP_BALBcJ_G0026047.1 mouse_genomes_project 2 86779382 86786605 - protein_coding processed_transcript MGP_BALBcJ_T0055683.1 MGP_BALBcJ_G0025898.1 mouse_genomes_project 2 82922746 82923691 - MGP_BALBcJ_P0055683 Olfr993 protein_coding protein_coding MGP_BALBcJ_T0004149.1 MGP_BALBcJ_G0003667.1 mouse_genomes_project 2 164357519 164365653 + Gm14437 antisense antisense MGP_BALBcJ_T0011496.1 MGP_BALBcJ_G0009621.1 mouse_genomes_project 2 145793944 145794268 - Gm22261 misc_RNA misc_RNA MGP_BALBcJ_T0011500.1 MGP_BALBcJ_G0009625.1 mouse_genomes_project 2 157308444 157308530 + Gm24379 misc_RNA misc_RNA MGP_BALBcJ_T0058095.1 MGP_BALBcJ_G0026580.1 mouse_genomes_project 2 145911741 145917733 + MGP_BALBcJ_P0058095 protein_coding protein_coding MGP_BALBcJ_T0058096.1 MGP_BALBcJ_G0026580.1 mouse_genomes_project 2 145914843 145924306 + MGP_BALBcJ_P0058096 protein_coding protein_coding MGP_BALBcJ_T0058097.1 MGP_BALBcJ_G0026580.1 mouse_genomes_project 2 145918135 145942874 + protein_coding retained_intron MGP_BALBcJ_T0055861.1 MGP_BALBcJ_G0026059.1 mouse_genomes_project 2 86979637 86980573 - MGP_BALBcJ_P0055861 Olfr1225 protein_coding protein_coding MGP_BALBcJ_T0053203.1 MGP_BALBcJ_G0025441.1 mouse_genomes_project 2 22846483 22849545 + MGP_BALBcJ_P0053203 Obp2b protein_coding protein_coding MGP_BALBcJ_T0053204.1 MGP_BALBcJ_G0025441.1 mouse_genomes_project 2 22847480 22849580 + MGP_BALBcJ_P0053204 Obp2b protein_coding unknown_likely_coding MGP_BALBcJ_T0098757.1 MGP_BALBcJ_G0036811.1 mouse_genomes_project 2 170369547 170369811 - Gm26489 scaRNA scaRNA MGP_BALBcJ_T0013642.1 MGP_BALBcJ_G0011739.1 mouse_genomes_project 2 90130385 90131075 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057629.1 MGP_BALBcJ_G0026478.1 mouse_genomes_project 2 128799776 128800588 + MGP_BALBcJ_P0057629 1700020A23Rik protein_coding protein_coding MGP_BALBcJ_T0057630.1 MGP_BALBcJ_G0026478.1 mouse_genomes_project 2 128799782 128800536 + MGP_BALBcJ_P0057630 1700020A23Rik protein_coding protein_coding MGP_BALBcJ_T0057631.1 MGP_BALBcJ_G0026478.1 mouse_genomes_project 2 128799803 128800592 + MGP_BALBcJ_P0057631 1700020A23Rik protein_coding protein_coding MGP_BALBcJ_T0058958.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159788287 159954707 - MGP_BALBcJ_P0058958 Chd6 protein_coding protein_coding MGP_BALBcJ_T0058959.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159801077 159802649 - Chd6 protein_coding processed_transcript MGP_BALBcJ_T0058960.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159801191 159805924 - Chd6 protein_coding processed_transcript MGP_BALBcJ_T0058961.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159821619 159826183 - Chd6 protein_coding retained_intron MGP_BALBcJ_T0058962.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159824321 159954707 - MGP_BALBcJ_P0058962 Chd6 protein_coding protein_coding MGP_BALBcJ_T0058963.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159834880 159851852 - Chd6 protein_coding retained_intron MGP_BALBcJ_T0058964.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159851392 159954760 - Chd6 protein_coding retained_intron MGP_BALBcJ_T0058965.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159857450 159861608 - Chd6 protein_coding processed_transcript MGP_BALBcJ_T0058966.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159869244 159872907 - Chd6 protein_coding processed_transcript MGP_BALBcJ_T0058967.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159873197 159895652 - MGP_BALBcJ_P0058967 Chd6 protein_coding protein_coding MGP_BALBcJ_T0058968.1 MGP_BALBcJ_G0026785.1 mouse_genomes_project 2 159878380 159954689 - Chd6 protein_coding retained_intron MGP_BALBcJ_T0054226.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30265090 30411620 - MGP_BALBcJ_P0054226 Garnl3 protein_coding protein_coding MGP_BALBcJ_T0054227.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30265095 30367072 - MGP_BALBcJ_P0054227 Garnl3 protein_coding protein_coding MGP_BALBcJ_T0054228.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30265245 30366191 - MGP_BALBcJ_P0054228 Garnl3 protein_coding protein_coding MGP_BALBcJ_T0054229.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30284006 30287703 - Garnl3 protein_coding retained_intron MGP_BALBcJ_T0054230.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30288302 30385421 - Garnl3 protein_coding processed_transcript MGP_BALBcJ_T0054231.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30294521 30314374 - MGP_BALBcJ_P0054231 Garnl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054232.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30298618 30306784 - Garnl3 protein_coding retained_intron MGP_BALBcJ_T0054233.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30326383 30366619 - Garnl3 protein_coding processed_transcript MGP_BALBcJ_T0054234.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30333948 30366380 - Garnl3 protein_coding processed_transcript MGP_BALBcJ_T0054235.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30333953 30412755 - MGP_BALBcJ_P0054235 Garnl3 protein_coding protein_coding MGP_BALBcJ_T0054236.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30333955 30412759 - MGP_BALBcJ_P0054236 Garnl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054237.1 MGP_BALBcJ_G0025604.1 mouse_genomes_project 2 30334000 30411713 - MGP_BALBcJ_P0054237 Garnl3 protein_coding protein_coding MGP_BALBcJ_T0013601.1 MGP_BALBcJ_G0011698.1 mouse_genomes_project 2 78501158 78502411 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007396.1 MGP_BALBcJ_G0006062.1 mouse_genomes_project 2 169709808 169719836 - Gm14264 lincRNA lincRNA MGP_BALBcJ_T0010417.1 MGP_BALBcJ_G0008542.1 mouse_genomes_project 2 90417539 90417614 + Mir7222 miRNA miRNA MGP_BALBcJ_T0102414.1 MGP_BALBcJ_G0040230.1 mouse_genomes_project 2 84969991 84970912 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004075.1 MGP_BALBcJ_G0003612.1 mouse_genomes_project 2 130573421 130667200 + Gm14051 antisense antisense MGP_BALBcJ_T0007336.1 MGP_BALBcJ_G0006011.1 mouse_genomes_project 2 150339099 150341500 - 4930556L07Rik lincRNA lincRNA MGP_BALBcJ_T0010396.1 MGP_BALBcJ_G0008521.1 mouse_genomes_project 2 42356682 42356760 - Mir5129 miRNA miRNA MGP_BALBcJ_T0004060.1 MGP_BALBcJ_G0003602.1 mouse_genomes_project 2 125947726 125956604 + Gm14244 antisense antisense MGP_BALBcJ_T0056276.1 MGP_BALBcJ_G0026151.1 mouse_genomes_project 2 91790508 91791748 - MGP_BALBcJ_P0056276 protein_coding protein_coding MGP_BALBcJ_T0056277.1 MGP_BALBcJ_G0026151.1 mouse_genomes_project 2 91790514 91791900 - MGP_BALBcJ_P0056277 protein_coding protein_coding MGP_BALBcJ_T0052559.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9404926 9479470 - Fam188a protein_coding processed_transcript MGP_BALBcJ_T0052560.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9404926 9479466 - MGP_BALBcJ_P0052560 Fam188a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052561.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9404926 9479457 - MGP_BALBcJ_P0052561 Fam188a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052562.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9404926 9479492 - MGP_BALBcJ_P0052562 Fam188a protein_coding protein_coding MGP_BALBcJ_T0052563.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9404926 9479470 - MGP_BALBcJ_P0052563 Fam188a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052564.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9404929 9479474 - MGP_BALBcJ_P0052564 Fam188a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052565.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9405295 9414571 - MGP_BALBcJ_P0052565 Fam188a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052566.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9405581 9457373 - Fam188a protein_coding retained_intron MGP_BALBcJ_T0052567.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9405629 9479310 - Fam188a protein_coding processed_transcript MGP_BALBcJ_T0052568.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9408593 9479432 - MGP_BALBcJ_P0052568 Fam188a protein_coding protein_coding MGP_BALBcJ_T0052569.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9414444 9479453 - Fam188a protein_coding retained_intron MGP_BALBcJ_T0052570.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9421993 9423838 - Fam188a protein_coding retained_intron MGP_BALBcJ_T0052571.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9422162 9479471 - MGP_BALBcJ_P0052571 Fam188a protein_coding protein_coding MGP_BALBcJ_T0052572.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9445770 9446606 - Fam188a protein_coding retained_intron MGP_BALBcJ_T0052573.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9446471 9469532 - MGP_BALBcJ_P0052573 Fam188a protein_coding protein_coding MGP_BALBcJ_T0052574.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9459389 9479463 - Fam188a protein_coding retained_intron MGP_BALBcJ_T0052575.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9459774 9469671 - Fam188a protein_coding retained_intron MGP_BALBcJ_T0052576.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9460789 9479413 - MGP_BALBcJ_P0052576 Fam188a protein_coding protein_coding MGP_BALBcJ_T0052577.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9460800 9479271 - MGP_BALBcJ_P0052577 Fam188a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052578.1 MGP_BALBcJ_G0025324.1 mouse_genomes_project 2 9463728 9464460 - Fam188a protein_coding processed_transcript MGP_BALBcJ_T0056960.1 MGP_BALBcJ_G0026336.1 mouse_genomes_project 2 118320271 118345249 - MGP_BALBcJ_P0056960 Pla2g4d protein_coding protein_coding MGP_BALBcJ_T0054814.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56522845 56717957 + MGP_BALBcJ_P0054814 Pkp4 protein_coding protein_coding MGP_BALBcJ_T0054815.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56522845 56717958 + MGP_BALBcJ_P0054815 Pkp4 protein_coding protein_coding MGP_BALBcJ_T0054816.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56522975 56717577 + MGP_BALBcJ_P0054816 Pkp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054817.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56522975 56701804 + MGP_BALBcJ_P0054817 Pkp4 protein_coding protein_coding MGP_BALBcJ_T0054818.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56523003 56717961 + MGP_BALBcJ_P0054818 Pkp4 protein_coding protein_coding MGP_BALBcJ_T0054819.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56523015 56667982 + Pkp4 protein_coding processed_transcript MGP_BALBcJ_T0054820.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56523038 56701807 + MGP_BALBcJ_P0054820 Pkp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054821.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56523922 56576962 + Pkp4 protein_coding processed_transcript MGP_BALBcJ_T0054822.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56523922 56668214 + MGP_BALBcJ_P0054822 Pkp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054823.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56562755 56576977 + Pkp4 protein_coding processed_transcript MGP_BALBcJ_T0054824.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56576613 56717960 + MGP_BALBcJ_P0054824 Pkp4 protein_coding unknown_likely_coding MGP_BALBcJ_T0054825.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56591679 56717958 + MGP_BALBcJ_P0054825 Pkp4 protein_coding protein_coding MGP_BALBcJ_T0054826.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56629032 56671085 + Pkp4 protein_coding processed_transcript MGP_BALBcJ_T0054827.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56685725 56717958 + Pkp4 protein_coding processed_transcript MGP_BALBcJ_T0054828.1 MGP_BALBcJ_G0025725.1 mouse_genomes_project 2 56705127 56711187 + Pkp4 protein_coding processed_transcript MGP_BALBcJ_T0013676.1 MGP_BALBcJ_G0011773.1 mouse_genomes_project 2 103966500 103966656 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055901.1 MGP_BALBcJ_G0026087.1 mouse_genomes_project 2 87757085 87761245 + MGP_BALBcJ_P0055901 Olfr1260 protein_coding protein_coding MGP_BALBcJ_T0055902.1 MGP_BALBcJ_G0026087.1 mouse_genomes_project 2 87757092 87760725 + Olfr1260 protein_coding processed_transcript MGP_BALBcJ_T0055903.1 MGP_BALBcJ_G0026087.1 mouse_genomes_project 2 87757095 87760675 + MGP_BALBcJ_P0055903 Olfr1260 protein_coding protein_coding MGP_BALBcJ_T0055904.1 MGP_BALBcJ_G0026087.1 mouse_genomes_project 2 87757101 87760732 + Olfr1260 protein_coding processed_transcript MGP_BALBcJ_T0055905.1 MGP_BALBcJ_G0026087.1 mouse_genomes_project 2 87760312 87761245 + MGP_BALBcJ_P0055905 Olfr1260 protein_coding protein_coding MGP_BALBcJ_T0100953.1 MGP_BALBcJ_G0038989.1 mouse_genomes_project 2 58905141 58905270 + Gm22338 snoRNA snoRNA MGP_BALBcJ_T0055829.1 MGP_BALBcJ_G0026030.1 mouse_genomes_project 2 86387450 86388371 + MGP_BALBcJ_P0055829 Olfr1189 protein_coding protein_coding MGP_BALBcJ_T0001019.1 MGP_BALBcJ_G0000947.1 mouse_genomes_project 2 8191773 8192702 + TEC TEC MGP_BALBcJ_T0058220.1 MGP_BALBcJ_G0026618.1 mouse_genomes_project 2 150235105 150260078 - MGP_BALBcJ_P0058220 Rad21l protein_coding protein_coding MGP_BALBcJ_T0058221.1 MGP_BALBcJ_G0026618.1 mouse_genomes_project 2 150235105 150260078 - MGP_BALBcJ_P0058221 Rad21l protein_coding protein_coding MGP_BALBcJ_T0004166.1 MGP_BALBcJ_G0003681.1 mouse_genomes_project 2 172391435 172393166 + Pmepa1os antisense antisense MGP_BALBcJ_T0056973.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118412890 118461676 - MGP_BALBcJ_P0056973 Tmem87a protein_coding protein_coding MGP_BALBcJ_T0056974.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118412890 118461696 - MGP_BALBcJ_P0056974 Tmem87a protein_coding protein_coding MGP_BALBcJ_T0056975.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118412894 118461702 - Tmem87a protein_coding processed_transcript MGP_BALBcJ_T0056976.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118413528 118461684 - Tmem87a protein_coding processed_transcript MGP_BALBcJ_T0056977.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118420866 118461685 - MGP_BALBcJ_P0056977 Tmem87a protein_coding protein_coding MGP_BALBcJ_T0056978.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118438384 118461720 - Tmem87a protein_coding processed_transcript MGP_BALBcJ_T0056979.1 MGP_BALBcJ_G0026339.1 mouse_genomes_project 2 118438898 118461688 - Tmem87a protein_coding retained_intron MGP_BALBcJ_T0058472.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514587 153591199 + MGP_BALBcJ_P0058472 Raly protein_coding protein_coding MGP_BALBcJ_T0058473.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514597 153587392 + MGP_BALBcJ_P0058473 Raly protein_coding protein_coding MGP_BALBcJ_T0058474.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514601 153591215 + MGP_BALBcJ_P0058474 Raly protein_coding protein_coding MGP_BALBcJ_T0058475.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514609 153585492 + MGP_BALBcJ_P0058475 Raly protein_coding protein_coding MGP_BALBcJ_T0058476.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514624 153591198 + MGP_BALBcJ_P0058476 Raly protein_coding protein_coding MGP_BALBcJ_T0058477.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514648 153591215 + MGP_BALBcJ_P0058477 Raly protein_coding protein_coding MGP_BALBcJ_T0058478.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514843 153587605 + MGP_BALBcJ_P0058478 Raly protein_coding protein_coding MGP_BALBcJ_T0058479.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514845 153572013 + Raly protein_coding processed_transcript MGP_BALBcJ_T0058480.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153514860 153580920 + Raly protein_coding processed_transcript MGP_BALBcJ_T0058482.1 MGP_BALBcJ_G0026700.1 mouse_genomes_project 2 153515204 153581033 + Raly protein_coding processed_transcript MGP_BALBcJ_T0057939.1 MGP_BALBcJ_G0026546.1 mouse_genomes_project 2 138727926 138891732 - MGP_BALBcJ_P0057939 Sel1l2 protein_coding protein_coding MGP_BALBcJ_T0057940.1 MGP_BALBcJ_G0026546.1 mouse_genomes_project 2 138792754 138795962 - Sel1l2 protein_coding processed_transcript MGP_BALBcJ_T0057941.1 MGP_BALBcJ_G0026546.1 mouse_genomes_project 2 138792759 138891734 - MGP_BALBcJ_P0057941 Sel1l2 protein_coding protein_coding MGP_BALBcJ_T0055706.1 MGP_BALBcJ_G0025920.1 mouse_genomes_project 2 83532341 83533298 + MGP_BALBcJ_P0055706 Olfr1030 protein_coding protein_coding MGP_BALBcJ_T0053528.1 MGP_BALBcJ_G0025501.1 mouse_genomes_project 2 25783007 25795551 - MGP_BALBcJ_P0053528 Gfi1b protein_coding protein_coding MGP_BALBcJ_T0053529.1 MGP_BALBcJ_G0025501.1 mouse_genomes_project 2 25783012 25795514 - MGP_BALBcJ_P0053529 Gfi1b protein_coding protein_coding MGP_BALBcJ_T0053530.1 MGP_BALBcJ_G0025501.1 mouse_genomes_project 2 25788329 25788951 - Gfi1b protein_coding processed_transcript MGP_BALBcJ_T0053531.1 MGP_BALBcJ_G0025501.1 mouse_genomes_project 2 25788336 25795551 - Gfi1b protein_coding processed_transcript MGP_BALBcJ_T0054193.1 MGP_BALBcJ_G0025600.1 mouse_genomes_project 2 30153726 30202962 + MGP_BALBcJ_P0054193 Fam129b protein_coding protein_coding MGP_BALBcJ_T0054194.1 MGP_BALBcJ_G0025600.1 mouse_genomes_project 2 30173439 30187655 + MGP_BALBcJ_P0054194 Fam129b protein_coding protein_coding MGP_BALBcJ_T0054195.1 MGP_BALBcJ_G0025600.1 mouse_genomes_project 2 30188604 30190284 + Fam129b protein_coding retained_intron MGP_BALBcJ_T0054196.1 MGP_BALBcJ_G0025600.1 mouse_genomes_project 2 30192418 30198732 + Fam129b protein_coding processed_transcript MGP_BALBcJ_T0054197.1 MGP_BALBcJ_G0025600.1 mouse_genomes_project 2 30196348 30199815 + Fam129b protein_coding processed_transcript MGP_BALBcJ_T0054198.1 MGP_BALBcJ_G0025600.1 mouse_genomes_project 2 30199349 30201347 + Fam129b protein_coding processed_transcript MGP_BALBcJ_T0013842.1 MGP_BALBcJ_G0011939.1 mouse_genomes_project 2 164888542 164889104 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101009.1 MGP_BALBcJ_G0039045.1 mouse_genomes_project 2 166016377 166016470 + Gm25878 snoRNA snoRNA MGP_BALBcJ_T0007166.1 MGP_BALBcJ_G0005872.1 mouse_genomes_project 2 34381711 34382588 - Gm13434 lincRNA lincRNA MGP_BALBcJ_T0013858.1 MGP_BALBcJ_G0011955.1 mouse_genomes_project 2 173574548 173574909 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059251.1 MGP_BALBcJ_G0026867.1 mouse_genomes_project 2 164266439 164283748 - MGP_BALBcJ_P0059251 Zfp663 protein_coding protein_coding MGP_BALBcJ_T0059252.1 MGP_BALBcJ_G0026867.1 mouse_genomes_project 2 164266440 164274903 - MGP_BALBcJ_P0059252 Zfp663 protein_coding protein_coding MGP_BALBcJ_T0059253.1 MGP_BALBcJ_G0026867.1 mouse_genomes_project 2 164268953 164274168 - Zfp663 protein_coding processed_transcript MGP_BALBcJ_T0059254.1 MGP_BALBcJ_G0026867.1 mouse_genomes_project 2 164269186 164283742 - MGP_BALBcJ_P0059254 Zfp663 protein_coding protein_coding MGP_BALBcJ_T0100951.1 MGP_BALBcJ_G0038987.1 mouse_genomes_project 2 55083378 55083529 - Gm25388 snoRNA snoRNA MGP_BALBcJ_T0013466.1 MGP_BALBcJ_G0011563.1 mouse_genomes_project 2 31729514 31729770 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010409.1 MGP_BALBcJ_G0008534.1 mouse_genomes_project 2 74656262 74656344 - Gm44360 miRNA miRNA MGP_BALBcJ_T0102441.1 MGP_BALBcJ_G0040257.1 mouse_genomes_project 2 137359365 137359950 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007240.1 MGP_BALBcJ_G0005936.1 mouse_genomes_project 2 90568816 90586921 + Gm13816 lincRNA lincRNA MGP_BALBcJ_T0013447.1 MGP_BALBcJ_G0011544.1 mouse_genomes_project 2 22651504 22651744 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055444.1 MGP_BALBcJ_G0025844.1 mouse_genomes_project 2 74766518 74861220 - MGP_BALBcJ_P0055444 Sestd1 protein_coding protein_coding MGP_BALBcJ_T0055445.1 MGP_BALBcJ_G0025844.1 mouse_genomes_project 2 74772425 74836039 - MGP_BALBcJ_P0055445 Sestd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0055446.1 MGP_BALBcJ_G0025844.1 mouse_genomes_project 2 74772733 74876045 - MGP_BALBcJ_P0055446 Sestd1 protein_coding protein_coding MGP_BALBcJ_T0055447.1 MGP_BALBcJ_G0025844.1 mouse_genomes_project 2 74783063 74785606 - Sestd1 protein_coding processed_transcript MGP_BALBcJ_T0055448.1 MGP_BALBcJ_G0025844.1 mouse_genomes_project 2 74783065 74876042 - Sestd1 protein_coding processed_transcript MGP_BALBcJ_T0098752.1 MGP_BALBcJ_G0036806.1 mouse_genomes_project 2 48916785 48916915 - Gm23505 scaRNA scaRNA MGP_BALBcJ_T0055246.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69515722 69802550 + MGP_BALBcJ_P0055246 Rapgef4 protein_coding protein_coding MGP_BALBcJ_T0055247.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69515729 69567521 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055248.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69515741 69679268 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055249.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69515769 69801452 + MGP_BALBcJ_P0055249 Rapgef4 protein_coding protein_coding MGP_BALBcJ_T0055250.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69591044 69802548 + MGP_BALBcJ_P0055250 Rapgef4 protein_coding protein_coding MGP_BALBcJ_T0055251.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69591444 69679443 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055252.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69678680 69734566 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055253.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69678697 69701254 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055254.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69718051 69802548 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055255.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69737112 69746700 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0055256.1 MGP_BALBcJ_G0025800.1 mouse_genomes_project 2 69786845 69801731 + Rapgef4 protein_coding processed_transcript MGP_BALBcJ_T0013635.1 MGP_BALBcJ_G0011732.1 mouse_genomes_project 2 86991422 86992229 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098580.1 MGP_BALBcJ_G0036634.1 mouse_genomes_project 2 143869640 143869734 + Gm22731 rRNA rRNA MGP_BALBcJ_T0013823.1 MGP_BALBcJ_G0011920.1 mouse_genomes_project 2 155775600 155776320 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013384.1 MGP_BALBcJ_G0011481.1 mouse_genomes_project 2 617200 617989 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007385.1 MGP_BALBcJ_G0006053.1 mouse_genomes_project 2 168042951 168044312 + Gm9873 lincRNA lincRNA MGP_BALBcJ_T0007386.1 MGP_BALBcJ_G0006053.1 mouse_genomes_project 2 168043196 168044293 + Gm9873 lincRNA lincRNA MGP_BALBcJ_T0013857.1 MGP_BALBcJ_G0011954.1 mouse_genomes_project 2 173170125 173170780 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100930.1 MGP_BALBcJ_G0038966.1 mouse_genomes_project 2 23771706 23771838 - Snora17 snoRNA snoRNA MGP_BALBcJ_T0001050.1 MGP_BALBcJ_G0000978.1 mouse_genomes_project 2 20520472 20521990 + TEC TEC MGP_BALBcJ_T0013788.1 MGP_BALBcJ_G0011885.1 mouse_genomes_project 2 147931669 147932388 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052780.1 MGP_BALBcJ_G0025361.1 mouse_genomes_project 2 18309196 18318519 + MGP_BALBcJ_P0052780 Thnsl1 protein_coding protein_coding MGP_BALBcJ_T0052781.1 MGP_BALBcJ_G0025361.1 mouse_genomes_project 2 18309211 18317886 + MGP_BALBcJ_P0052781 Thnsl1 protein_coding protein_coding MGP_BALBcJ_T0052782.1 MGP_BALBcJ_G0025361.1 mouse_genomes_project 2 18309231 18316789 + MGP_BALBcJ_P0052782 Thnsl1 protein_coding protein_coding MGP_BALBcJ_T0052783.1 MGP_BALBcJ_G0025361.1 mouse_genomes_project 2 18309245 18315052 + MGP_BALBcJ_P0052783 Thnsl1 protein_coding protein_coding MGP_BALBcJ_T0052784.1 MGP_BALBcJ_G0025361.1 mouse_genomes_project 2 18309259 18317818 + MGP_BALBcJ_P0052784 Thnsl1 protein_coding protein_coding MGP_BALBcJ_T0007229.1 MGP_BALBcJ_G0005925.1 mouse_genomes_project 2 77034842 77042349 + Gm26755 lincRNA lincRNA MGP_BALBcJ_T0056655.1 MGP_BALBcJ_G0026264.1 mouse_genomes_project 2 110386817 110421849 + MGP_BALBcJ_P0056655 Katnbl1 protein_coding protein_coding MGP_BALBcJ_T0056656.1 MGP_BALBcJ_G0026264.1 mouse_genomes_project 2 110386832 110415127 + Katnbl1 protein_coding retained_intron MGP_BALBcJ_T0007321.1 MGP_BALBcJ_G0006000.1 mouse_genomes_project 2 142694194 142710060 - lincRNA lincRNA MGP_BALBcJ_T0007322.1 MGP_BALBcJ_G0006000.1 mouse_genomes_project 2 142695359 142699866 - lincRNA lincRNA MGP_BALBcJ_T0056928.1 MGP_BALBcJ_G0026329.1 mouse_genomes_project 2 118029723 118085217 + MGP_BALBcJ_P0056928 Mapkbp1 protein_coding protein_coding MGP_BALBcJ_T0056929.1 MGP_BALBcJ_G0026329.1 mouse_genomes_project 2 118030078 118085211 + MGP_BALBcJ_P0056929 Mapkbp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0056930.1 MGP_BALBcJ_G0026329.1 mouse_genomes_project 2 118069197 118070606 + Mapkbp1 protein_coding retained_intron MGP_BALBcJ_T0056931.1 MGP_BALBcJ_G0026329.1 mouse_genomes_project 2 118070554 118073153 + Mapkbp1 protein_coding retained_intron MGP_BALBcJ_T0056932.1 MGP_BALBcJ_G0026329.1 mouse_genomes_project 2 118079905 118080879 + Mapkbp1 protein_coding retained_intron MGP_BALBcJ_T0054943.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59916048 59997474 - MGP_BALBcJ_P0054943 Fap protein_coding protein_coding MGP_BALBcJ_T0054944.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59916218 59997379 - Fap protein_coding processed_transcript MGP_BALBcJ_T0054945.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59916228 59918534 - MGP_BALBcJ_P0054945 Fap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054946.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59916289 59997250 - MGP_BALBcJ_P0054946 Fap protein_coding protein_coding MGP_BALBcJ_T0054947.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59916289 59997250 - MGP_BALBcJ_P0054947 Fap protein_coding protein_coding MGP_BALBcJ_T0054948.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59916289 59997250 - MGP_BALBcJ_P0054948 Fap protein_coding protein_coding MGP_BALBcJ_T0054949.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59944544 59987259 - Fap protein_coding retained_intron MGP_BALBcJ_T0054950.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59952978 59997322 - Fap protein_coding retained_intron MGP_BALBcJ_T0054951.1 MGP_BALBcJ_G0025742.1 mouse_genomes_project 2 59966527 59996959 - MGP_BALBcJ_P0054951 Fap protein_coding protein_coding MGP_BALBcJ_T0053109.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22552475 22558287 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053110.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22552475 22557535 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053117.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556784 22557652 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053118.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556816 22558429 - MGP_BALBcJ_P0053118 BC029214 protein_coding protein_coding MGP_BALBcJ_T0053119.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556818 22558407 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053120.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556819 22557614 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053121.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556819 22557999 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053122.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556865 22558343 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053123.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22556895 22558300 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053124.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22557149 22558366 - MGP_BALBcJ_P0053124 BC029214 protein_coding protein_coding MGP_BALBcJ_T0053125.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22557346 22558358 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053126.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22557362 22558262 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0053127.1 MGP_BALBcJ_G0025420.1 mouse_genomes_project 2 22557593 22558283 - BC029214 protein_coding processed_transcript MGP_BALBcJ_T0007311.1 MGP_BALBcJ_G0005990.1 mouse_genomes_project 2 131892376 131923421 + A430048G15Rik lincRNA lincRNA MGP_BALBcJ_T0056340.1 MGP_BALBcJ_G0026165.1 mouse_genomes_project 2 100206233 100307610 - MGP_BALBcJ_P0056340 Trim44 protein_coding protein_coding MGP_BALBcJ_T0056341.1 MGP_BALBcJ_G0026165.1 mouse_genomes_project 2 100210608 100306967 - MGP_BALBcJ_P0056341 Trim44 protein_coding protein_coding MGP_BALBcJ_T0056342.1 MGP_BALBcJ_G0026165.1 mouse_genomes_project 2 100263753 100314509 - MGP_BALBcJ_P0056342 Trim44 protein_coding protein_coding MGP_BALBcJ_T0003985.1 MGP_BALBcJ_G0003553.1 mouse_genomes_project 2 69018237 69029703 - Dlx1as antisense antisense MGP_BALBcJ_T0003986.1 MGP_BALBcJ_G0003553.1 mouse_genomes_project 2 69025815 69029711 - Dlx1as antisense antisense MGP_BALBcJ_T0003987.1 MGP_BALBcJ_G0003553.1 mouse_genomes_project 2 69029622 69039914 - Dlx1as antisense antisense MGP_BALBcJ_T0003988.1 MGP_BALBcJ_G0003553.1 mouse_genomes_project 2 69034547 69039995 - Dlx1as antisense antisense MGP_BALBcJ_T0055043.1 MGP_BALBcJ_G0025761.1 mouse_genomes_project 2 65036098 65277038 + B3galt1 protein_coding processed_transcript MGP_BALBcJ_T0055044.1 MGP_BALBcJ_G0025761.1 mouse_genomes_project 2 65215378 65581226 + MGP_BALBcJ_P0055044 B3galt1 protein_coding protein_coding MGP_BALBcJ_T0055045.1 MGP_BALBcJ_G0025761.1 mouse_genomes_project 2 65569547 65583590 + MGP_BALBcJ_P0055045 B3galt1 protein_coding protein_coding MGP_BALBcJ_T0055046.1 MGP_BALBcJ_G0025761.1 mouse_genomes_project 2 65580788 65585765 + MGP_BALBcJ_P0055046 B3galt1 protein_coding protein_coding MGP_BALBcJ_T0054308.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32103279 32121618 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0054309.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32103943 32124771 - MGP_BALBcJ_P0054309 Fbxw2 protein_coding protein_coding MGP_BALBcJ_T0054310.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32104103 32121879 - MGP_BALBcJ_P0054310 Fbxw2 protein_coding protein_coding MGP_BALBcJ_T0054311.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32104104 32124933 - MGP_BALBcJ_P0054311 Fbxw2 protein_coding protein_coding MGP_BALBcJ_T0054312.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32104106 32124928 - MGP_BALBcJ_P0054312 Fbxw2 protein_coding protein_coding MGP_BALBcJ_T0054313.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32104106 32124769 - MGP_BALBcJ_P0054313 Fbxw2 protein_coding protein_coding MGP_BALBcJ_T0054314.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32105018 32124899 - MGP_BALBcJ_P0054314 Fbxw2 protein_coding protein_coding MGP_BALBcJ_T0054315.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32106043 32107425 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0054316.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32110600 32125009 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0054317.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32111499 32124865 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0054318.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32114029 32124915 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0054319.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32120500 32124905 - Fbxw2 protein_coding retained_intron MGP_BALBcJ_T0054320.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32121301 32124720 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0054321.1 MGP_BALBcJ_G0025616.1 mouse_genomes_project 2 32123960 32124913 - Fbxw2 protein_coding processed_transcript MGP_BALBcJ_T0003890.1 MGP_BALBcJ_G0003479.1 mouse_genomes_project 2 15102246 15109348 + Gm13330 antisense antisense MGP_BALBcJ_T0056054.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89048537 89054153 + MGP_BALBcJ_P0056054 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056055.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89048698 89049712 + Pacsin3 protein_coding retained_intron MGP_BALBcJ_T0056056.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89048727 89053125 + MGP_BALBcJ_P0056056 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056057.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89048745 89057241 + MGP_BALBcJ_P0056057 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056058.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89049396 89053830 + MGP_BALBcJ_P0056058 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056059.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89049396 89057240 + MGP_BALBcJ_P0056059 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056060.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89049396 89057241 + MGP_BALBcJ_P0056060 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056061.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89049421 89053919 + MGP_BALBcJ_P0056061 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056062.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89049912 89057241 + MGP_BALBcJ_P0056062 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056063.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89049918 89053885 + MGP_BALBcJ_P0056063 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056064.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89051789 89052813 + Pacsin3 protein_coding processed_transcript MGP_BALBcJ_T0056065.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89052412 89054182 + MGP_BALBcJ_P0056065 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0056066.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89053388 89054253 + Pacsin3 protein_coding retained_intron MGP_BALBcJ_T0056067.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89055474 89056095 + Pacsin3 protein_coding retained_intron MGP_BALBcJ_T0056068.1 MGP_BALBcJ_G0026117.1 mouse_genomes_project 2 89055667 89056921 + MGP_BALBcJ_P0056068 Pacsin3 protein_coding protein_coding MGP_BALBcJ_T0013837.1 MGP_BALBcJ_G0011934.1 mouse_genomes_project 2 161837170 161838112 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059099.1 MGP_BALBcJ_G0026830.1 mouse_genomes_project 2 163377451 163382113 + MGP_BALBcJ_P0059099 Dbndd2 protein_coding protein_coding MGP_BALBcJ_T0059100.1 MGP_BALBcJ_G0026830.1 mouse_genomes_project 2 163377800 163382621 + MGP_BALBcJ_P0059100 Dbndd2 protein_coding protein_coding MGP_BALBcJ_T0059101.1 MGP_BALBcJ_G0026830.1 mouse_genomes_project 2 163377800 163382113 + MGP_BALBcJ_P0059101 Dbndd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059102.1 MGP_BALBcJ_G0026830.1 mouse_genomes_project 2 163377826 163381562 + MGP_BALBcJ_P0059102 Dbndd2 protein_coding protein_coding MGP_BALBcJ_T0059103.1 MGP_BALBcJ_G0026830.1 mouse_genomes_project 2 163378222 163384679 + MGP_BALBcJ_P0059103 Dbndd2 protein_coding protein_coding MGP_BALBcJ_T0059104.1 MGP_BALBcJ_G0026830.1 mouse_genomes_project 2 163379166 163382113 + MGP_BALBcJ_P0059104 Dbndd2 protein_coding protein_coding MGP_BALBcJ_T0004085.1 MGP_BALBcJ_G0003617.1 mouse_genomes_project 2 133629095 133675107 - 4930545L23Rik antisense antisense MGP_BALBcJ_T0056612.1 MGP_BALBcJ_G0026232.1 mouse_genomes_project 2 109310436 109311372 + MGP_BALBcJ_P0056612 protein_coding protein_coding MGP_BALBcJ_T0053588.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26543465 26723423 + MGP_BALBcJ_P0053588 Med27 protein_coding protein_coding MGP_BALBcJ_T0053589.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26543479 26676367 + MGP_BALBcJ_P0053589 Med27 protein_coding protein_coding MGP_BALBcJ_T0053590.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26575168 26708087 + MGP_BALBcJ_P0053590 Med27 protein_coding protein_coding MGP_BALBcJ_T0053591.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26575168 26698254 + MGP_BALBcJ_P0053591 Med27 protein_coding protein_coding MGP_BALBcJ_T0053592.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26575842 26698151 + MGP_BALBcJ_P0053592 Med27 protein_coding protein_coding MGP_BALBcJ_T0053593.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26575861 26723185 + MGP_BALBcJ_P0053593 Med27 protein_coding protein_coding MGP_BALBcJ_T0053594.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26575933 26675557 + MGP_BALBcJ_P0053594 Med27 protein_coding protein_coding MGP_BALBcJ_T0053595.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26588672 26721481 + Med27 protein_coding processed_transcript MGP_BALBcJ_T0053596.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26694448 26698476 + Med27 protein_coding retained_intron MGP_BALBcJ_T0053597.1 MGP_BALBcJ_G0025512.1 mouse_genomes_project 2 26703057 26723311 + Med27 protein_coding processed_transcript MGP_BALBcJ_T0055724.1 MGP_BALBcJ_G0025938.1 mouse_genomes_project 2 83918862 83919801 - MGP_BALBcJ_P0055724 Olfr1054 protein_coding protein_coding MGP_BALBcJ_T0013633.1 MGP_BALBcJ_G0011730.1 mouse_genomes_project 2 85607754 85608281 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057118.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119240103 119258707 - Trp53bp1 protein_coding processed_transcript MGP_BALBcJ_T0057119.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119241661 119316587 - MGP_BALBcJ_P0057119 Trp53bp1 protein_coding protein_coding MGP_BALBcJ_T0057120.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119241661 119316653 - MGP_BALBcJ_P0057120 Trp53bp1 protein_coding protein_coding MGP_BALBcJ_T0057121.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119245069 119282409 - MGP_BALBcJ_P0057121 Trp53bp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057122.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119246457 119251726 - Trp53bp1 protein_coding processed_transcript MGP_BALBcJ_T0057123.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119249445 119254492 - MGP_BALBcJ_P0057123 Trp53bp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057124.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119251825 119255308 - Trp53bp1 protein_coding processed_transcript MGP_BALBcJ_T0057125.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119255153 119267931 - MGP_BALBcJ_P0057125 Trp53bp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057126.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119255578 119267922 - Trp53bp1 protein_coding retained_intron MGP_BALBcJ_T0057127.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119258033 119265141 - Trp53bp1 protein_coding processed_transcript MGP_BALBcJ_T0057128.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119262628 119268069 - Trp53bp1 protein_coding retained_intron MGP_BALBcJ_T0057129.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119262864 119316567 - MGP_BALBcJ_P0057129 Trp53bp1 protein_coding protein_coding MGP_BALBcJ_T0057130.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119274823 119282092 - MGP_BALBcJ_P0057130 Trp53bp1 protein_coding protein_coding MGP_BALBcJ_T0057131.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119278494 119282224 - Trp53bp1 protein_coding processed_transcript MGP_BALBcJ_T0057132.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119283226 119298773 - MGP_BALBcJ_P0057132 Trp53bp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057133.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119303266 119316615 - Trp53bp1 protein_coding processed_transcript MGP_BALBcJ_T0057134.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119305759 119315532 - Trp53bp1 protein_coding retained_intron MGP_BALBcJ_T0057135.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119312558 119316607 - Trp53bp1 protein_coding retained_intron MGP_BALBcJ_T0057136.1 MGP_BALBcJ_G0026359.1 mouse_genomes_project 2 119314875 119316616 - Trp53bp1 protein_coding retained_intron MGP_BALBcJ_T0056632.1 MGP_BALBcJ_G0026252.1 mouse_genomes_project 2 110044953 110045907 - MGP_BALBcJ_P0056632 Olfr1312 protein_coding protein_coding MGP_BALBcJ_T0055821.1 MGP_BALBcJ_G0026023.1 mouse_genomes_project 2 86187283 86188213 - MGP_BALBcJ_P0055821 Olfr1180 protein_coding protein_coding MGP_BALBcJ_T0059497.1 MGP_BALBcJ_G0026922.1 mouse_genomes_project 2 171536364 171544647 - MGP_BALBcJ_P0059497 Gcnt7 protein_coding protein_coding MGP_BALBcJ_T0059498.1 MGP_BALBcJ_G0026922.1 mouse_genomes_project 2 171536365 171540794 - MGP_BALBcJ_P0059498 Gcnt7 protein_coding protein_coding MGP_BALBcJ_T0055280.1 MGP_BALBcJ_G0025806.1 mouse_genomes_project 2 70841403 70846950 + MGP_BALBcJ_P0055280 Sp9 protein_coding protein_coding MGP_BALBcJ_T0055281.1 MGP_BALBcJ_G0025806.1 mouse_genomes_project 2 70841444 70853799 + Sp9 protein_coding processed_transcript MGP_BALBcJ_T0053207.1 MGP_BALBcJ_G0025444.1 mouse_genomes_project 2 22912065 22933567 - MGP_BALBcJ_P0053207 Glt6d1 protein_coding protein_coding MGP_BALBcJ_T0053208.1 MGP_BALBcJ_G0025444.1 mouse_genomes_project 2 22913420 22933550 - Glt6d1 protein_coding processed_transcript MGP_BALBcJ_T0052399.1 MGP_BALBcJ_G0025301.1 mouse_genomes_project 2 2922891 3036801 + MGP_BALBcJ_P0052399 Upf2 protein_coding protein_coding MGP_BALBcJ_T0052400.1 MGP_BALBcJ_G0025301.1 mouse_genomes_project 2 3003196 3036796 + MGP_BALBcJ_P0052400 Upf2 protein_coding protein_coding MGP_BALBcJ_T0052401.1 MGP_BALBcJ_G0025301.1 mouse_genomes_project 2 3030115 3035600 + Upf2 protein_coding processed_transcript MGP_BALBcJ_T0059132.1 MGP_BALBcJ_G0026845.1 mouse_genomes_project 2 163627542 163642299 - MGP_BALBcJ_P0059132 Wfdc3 protein_coding protein_coding MGP_BALBcJ_T0059133.1 MGP_BALBcJ_G0026845.1 mouse_genomes_project 2 163627542 163639680 - MGP_BALBcJ_P0059133 Wfdc3 protein_coding protein_coding MGP_BALBcJ_T0059134.1 MGP_BALBcJ_G0026845.1 mouse_genomes_project 2 163639932 163642299 - Wfdc3 protein_coding processed_transcript MGP_BALBcJ_T0003899.1 MGP_BALBcJ_G0003488.1 mouse_genomes_project 2 22267971 22270530 - Gm38287 antisense antisense MGP_BALBcJ_T0013709.1 MGP_BALBcJ_G0011806.1 mouse_genomes_project 2 117043726 117043995 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013473.1 MGP_BALBcJ_G0011570.1 mouse_genomes_project 2 34328387 34328796 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052464.1 MGP_BALBcJ_G0025312.1 mouse_genomes_project 2 7116313 7151935 - MGP_BALBcJ_P0052464 Itih2 protein_coding protein_coding MGP_BALBcJ_T0052465.1 MGP_BALBcJ_G0025312.1 mouse_genomes_project 2 7130824 7152347 - MGP_BALBcJ_P0052465 Itih2 protein_coding protein_coding MGP_BALBcJ_T0052466.1 MGP_BALBcJ_G0025312.1 mouse_genomes_project 2 7147552 7152666 - MGP_BALBcJ_P0052466 Itih2 protein_coding protein_coding MGP_BALBcJ_T0004073.1 MGP_BALBcJ_G0003610.1 mouse_genomes_project 2 130000628 130002194 + Gm14285 antisense antisense MGP_BALBcJ_T0058140.1 MGP_BALBcJ_G0026600.1 mouse_genomes_project 2 148686864 148706363 - MGP_BALBcJ_P0058140 Zfp120 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058141.1 MGP_BALBcJ_G0026600.1 mouse_genomes_project 2 148686864 148706393 - MGP_BALBcJ_P0058141 Zfp120 protein_coding protein_coding MGP_BALBcJ_T0058142.1 MGP_BALBcJ_G0026600.1 mouse_genomes_project 2 148686864 148706363 - MGP_BALBcJ_P0058142 Zfp120 protein_coding protein_coding MGP_BALBcJ_T0058143.1 MGP_BALBcJ_G0026600.1 mouse_genomes_project 2 148691963 148706341 - Zfp120 protein_coding processed_transcript MGP_BALBcJ_T0054417.1 MGP_BALBcJ_G0025632.1 mouse_genomes_project 2 33346956 33360032 - MGP_BALBcJ_P0054417 Ndufa8 protein_coding protein_coding MGP_BALBcJ_T0010431.1 MGP_BALBcJ_G0008556.1 mouse_genomes_project 2 115202360 115202460 + Mir674 miRNA miRNA MGP_BALBcJ_T0055868.1 MGP_BALBcJ_G0026065.1 mouse_genomes_project 2 87106779 87107715 - MGP_BALBcJ_P0055868 Olfr1232 protein_coding protein_coding MGP_BALBcJ_T0059701.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179965097 180009653 - MGP_BALBcJ_P0059701 Dido1 protein_coding protein_coding MGP_BALBcJ_T0059702.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179975436 180017302 - MGP_BALBcJ_P0059702 Dido1 protein_coding protein_coding MGP_BALBcJ_T0059703.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179975438 179983215 - MGP_BALBcJ_P0059703 Dido1 protein_coding protein_coding MGP_BALBcJ_T0059704.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179976361 180009653 - MGP_BALBcJ_P0059704 Dido1 protein_coding protein_coding MGP_BALBcJ_T0059705.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179988314 180017302 - MGP_BALBcJ_P0059705 Dido1 protein_coding protein_coding MGP_BALBcJ_T0059706.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179988329 180009653 - MGP_BALBcJ_P0059706 Dido1 protein_coding protein_coding MGP_BALBcJ_T0059707.1 MGP_BALBcJ_G0026975.1 mouse_genomes_project 2 179992280 180009295 - Dido1 protein_coding processed_transcript MGP_BALBcJ_T0101888.1 MGP_BALBcJ_G0039786.1 mouse_genomes_project 2 86410876 86411794 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0099709.1 MGP_BALBcJ_G0037745.1 mouse_genomes_project 2 156539882 156539981 + Gm23463 snRNA snRNA MGP_BALBcJ_T0056864.1 MGP_BALBcJ_G0026316.1 mouse_genomes_project 2 117392280 117395417 + MGP_BALBcJ_P0056864 Chac1 protein_coding protein_coding MGP_BALBcJ_T0001051.1 MGP_BALBcJ_G0000979.1 mouse_genomes_project 2 21283407 21285191 + TEC TEC MGP_BALBcJ_T0057788.1 MGP_BALBcJ_G0026511.1 mouse_genomes_project 2 130355752 130389597 + MGP_BALBcJ_P0057788 Prn protein_coding protein_coding MGP_BALBcJ_T0057789.1 MGP_BALBcJ_G0026511.1 mouse_genomes_project 2 130355752 130389597 + MGP_BALBcJ_P0057789 Prn protein_coding protein_coding MGP_BALBcJ_T0057602.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128670691 128675555 + protein_coding retained_intron MGP_BALBcJ_T0057603.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128670693 128675156 + protein_coding retained_intron MGP_BALBcJ_T0057604.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128670702 128673779 + MGP_BALBcJ_P0057604 protein_coding protein_coding MGP_BALBcJ_T0057605.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128670721 128674672 + MGP_BALBcJ_P0057605 protein_coding unknown_likely_coding MGP_BALBcJ_T0057606.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128670739 128672339 + MGP_BALBcJ_P0057606 protein_coding protein_coding MGP_BALBcJ_T0057607.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128671078 128671943 + protein_coding retained_intron MGP_BALBcJ_T0057608.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128672042 128672507 + protein_coding retained_intron MGP_BALBcJ_T0057609.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128672399 128675156 + MGP_BALBcJ_P0057609 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057610.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128672540 128673812 + protein_coding retained_intron MGP_BALBcJ_T0057611.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128672713 128674197 + protein_coding retained_intron MGP_BALBcJ_T0057612.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128672835 128674201 + MGP_BALBcJ_P0057612 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057613.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128672903 128673524 + protein_coding retained_intron MGP_BALBcJ_T0057614.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128673463 128674705 + protein_coding retained_intron MGP_BALBcJ_T0057615.1 MGP_BALBcJ_G0026473.1 mouse_genomes_project 2 128673556 128674472 + MGP_BALBcJ_P0057615 protein_coding protein_coding MGP_BALBcJ_T0007232.1 MGP_BALBcJ_G0005928.1 mouse_genomes_project 2 82025206 82049941 - Gm13710 lincRNA lincRNA MGP_BALBcJ_T0010341.1 MGP_BALBcJ_G0008466.1 mouse_genomes_project 2 7515808 7515904 + Gm23542 miRNA miRNA MGP_BALBcJ_T0057754.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129698274 129719245 + Pank2 protein_coding processed_transcript MGP_BALBcJ_T0057755.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129698279 129734730 + MGP_BALBcJ_P0057755 Pank2 protein_coding protein_coding MGP_BALBcJ_T0057756.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129698304 129732030 + MGP_BALBcJ_P0057756 Pank2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057757.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129698347 129734728 + MGP_BALBcJ_P0057757 Pank2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057758.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129698575 129731873 + MGP_BALBcJ_P0057758 Pank2 protein_coding protein_coding MGP_BALBcJ_T0057759.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129698618 129732233 + Pank2 protein_coding processed_transcript MGP_BALBcJ_T0057760.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129709884 129728999 + MGP_BALBcJ_P0057760 Pank2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057761.1 MGP_BALBcJ_G0026505.1 mouse_genomes_project 2 129709992 129731850 + MGP_BALBcJ_P0057761 Pank2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004169.1 MGP_BALBcJ_G0003683.1 mouse_genomes_project 2 173406807 173420921 - Nespas antisense antisense MGP_BALBcJ_T0004170.1 MGP_BALBcJ_G0003683.1 mouse_genomes_project 2 173407764 173420874 - Nespas antisense antisense MGP_BALBcJ_T0004171.1 MGP_BALBcJ_G0003683.1 mouse_genomes_project 2 173409926 173411009 - Nespas antisense antisense MGP_BALBcJ_T0059675.1 MGP_BALBcJ_G0026968.1 mouse_genomes_project 2 179629949 179639514 - MGP_BALBcJ_P0059675 Gata5 protein_coding protein_coding MGP_BALBcJ_T0013613.1 MGP_BALBcJ_G0011710.1 mouse_genomes_project 2 82776009 82776230 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054054.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29622221 29648449 + MGP_BALBcJ_P0054054 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054055.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29632776 29637174 + Ciz1 protein_coding processed_transcript MGP_BALBcJ_T0054056.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29632776 29637295 + MGP_BALBcJ_P0054056 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054057.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29632827 29640068 + MGP_BALBcJ_P0054057 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054058.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29632964 29648455 + MGP_BALBcJ_P0054058 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054059.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29632964 29648449 + MGP_BALBcJ_P0054059 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054060.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29633119 29651046 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054061.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29633199 29635618 + Ciz1 protein_coding processed_transcript MGP_BALBcJ_T0054062.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29633320 29640269 + MGP_BALBcJ_P0054062 Ciz1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054063.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29633522 29634754 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054064.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29633571 29648455 + MGP_BALBcJ_P0054064 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054065.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29633576 29648450 + MGP_BALBcJ_P0054065 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054066.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29635111 29637281 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054067.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29637178 29641239 + MGP_BALBcJ_P0054067 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054068.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29637238 29642251 + MGP_BALBcJ_P0054068 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054069.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29640007 29641696 + Ciz1 protein_coding processed_transcript MGP_BALBcJ_T0054070.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29640854 29645690 + MGP_BALBcJ_P0054070 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0054071.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29641780 29644708 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054072.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29642262 29645152 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054073.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29644360 29648451 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054074.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29645259 29646542 + Ciz1 protein_coding retained_intron MGP_BALBcJ_T0054075.1 MGP_BALBcJ_G0025577.1 mouse_genomes_project 2 29645640 29650302 + MGP_BALBcJ_P0054075 Ciz1 protein_coding protein_coding MGP_BALBcJ_T0013533.1 MGP_BALBcJ_G0011630.1 mouse_genomes_project 2 54855406 54855949 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053171.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22692237 22717915 - MGP_BALBcJ_P0053171 Rabl6 protein_coding protein_coding MGP_BALBcJ_T0053172.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22693330 22699648 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053173.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22693330 22717859 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053174.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22693354 22694280 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053175.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22694408 22695043 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053176.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22694893 22696502 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053177.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22696639 22698354 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053178.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22696721 22717879 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0053179.1 MGP_BALBcJ_G0025431.1 mouse_genomes_project 2 22705853 22717850 - Rabl6 protein_coding processed_transcript MGP_BALBcJ_T0004062.1 MGP_BALBcJ_G0003604.1 mouse_genomes_project 2 127426433 127451069 - AI847159 antisense antisense MGP_BALBcJ_T0004063.1 MGP_BALBcJ_G0003604.1 mouse_genomes_project 2 127448584 127451069 - AI847159 antisense antisense MGP_BALBcJ_T0004064.1 MGP_BALBcJ_G0003604.1 mouse_genomes_project 2 127448588 127448978 - AI847159 antisense antisense MGP_BALBcJ_T0004065.1 MGP_BALBcJ_G0003604.1 mouse_genomes_project 2 127448632 127451104 - AI847159 antisense antisense MGP_BALBcJ_T0013630.1 MGP_BALBcJ_G0011727.1 mouse_genomes_project 2 85272948 85273672 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001071.1 MGP_BALBcJ_G0000999.1 mouse_genomes_project 2 36505078 36508558 - TEC TEC MGP_BALBcJ_T0058555.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154393380 154451527 - MGP_BALBcJ_P0058555 Trpc4ap protein_coding protein_coding MGP_BALBcJ_T0058556.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154393417 154451475 - MGP_BALBcJ_P0058556 Trpc4ap protein_coding protein_coding MGP_BALBcJ_T0058557.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154393854 154396852 - Trpc4ap protein_coding processed_transcript MGP_BALBcJ_T0058558.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154394705 154396898 - Trpc4ap protein_coding retained_intron MGP_BALBcJ_T0058559.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154398091 154431798 - Trpc4ap protein_coding retained_intron MGP_BALBcJ_T0058560.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154398098 154399650 - Trpc4ap protein_coding retained_intron MGP_BALBcJ_T0058561.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154402726 154422752 - Trpc4ap protein_coding retained_intron MGP_BALBcJ_T0058562.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154412419 154451525 - Trpc4ap protein_coding retained_intron MGP_BALBcJ_T0058563.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154424819 154427452 - Trpc4ap protein_coding retained_intron MGP_BALBcJ_T0058564.1 MGP_BALBcJ_G0026714.1 mouse_genomes_project 2 154431803 154451266 - Trpc4ap protein_coding processed_transcript MGP_BALBcJ_T0100963.1 MGP_BALBcJ_G0038999.1 mouse_genomes_project 2 92646052 92646184 - Gm26396 snoRNA snoRNA MGP_BALBcJ_T0055783.1 MGP_BALBcJ_G0025988.1 mouse_genomes_project 2 85336731 85337661 + MGP_BALBcJ_P0055783 protein_coding protein_coding MGP_BALBcJ_T0056672.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111313740 111700488 + MGP_BALBcJ_P0056672 Fmn1 protein_coding protein_coding MGP_BALBcJ_T0056673.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111313775 111483424 + Fmn1 protein_coding processed_transcript MGP_BALBcJ_T0056674.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111313786 111693593 + MGP_BALBcJ_P0056674 Fmn1 protein_coding protein_coding MGP_BALBcJ_T0056675.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111347733 111693344 + MGP_BALBcJ_P0056675 Fmn1 protein_coding protein_coding MGP_BALBcJ_T0056676.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111425168 111693593 + MGP_BALBcJ_P0056676 Fmn1 protein_coding protein_coding MGP_BALBcJ_T0056677.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111668001 111676059 + Fmn1 protein_coding processed_transcript MGP_BALBcJ_T0056678.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111668016 111693590 + Fmn1 protein_coding processed_transcript MGP_BALBcJ_T0056679.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111668016 111693472 + Fmn1 protein_coding processed_transcript MGP_BALBcJ_T0056680.1 MGP_BALBcJ_G0026270.1 mouse_genomes_project 2 111692408 111693468 + Fmn1 protein_coding processed_transcript MGP_BALBcJ_T0052735.1 MGP_BALBcJ_G0025355.1 mouse_genomes_project 2 16537204 16539043 + MGP_BALBcJ_P0052735 Ptf1a protein_coding protein_coding MGP_BALBcJ_T0054348.1 MGP_BALBcJ_G0025622.1 mouse_genomes_project 2 32385816 32404932 - MGP_BALBcJ_P0054348 AI182371 protein_coding unknown_likely_coding MGP_BALBcJ_T0054349.1 MGP_BALBcJ_G0025622.1 mouse_genomes_project 2 32387361 32404964 - MGP_BALBcJ_P0054349 AI182371 protein_coding protein_coding MGP_BALBcJ_T0054350.1 MGP_BALBcJ_G0025622.1 mouse_genomes_project 2 32389556 32404963 - MGP_BALBcJ_P0054350 AI182371 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054351.1 MGP_BALBcJ_G0025622.1 mouse_genomes_project 2 32389897 32397082 - AI182371 protein_coding processed_transcript MGP_BALBcJ_T0054352.1 MGP_BALBcJ_G0025622.1 mouse_genomes_project 2 32392612 32405822 - AI182371 protein_coding processed_transcript MGP_BALBcJ_T0055825.1 MGP_BALBcJ_G0026027.1 mouse_genomes_project 2 86317372 86318284 + MGP_BALBcJ_P0055825 Olfr1186 protein_coding protein_coding MGP_BALBcJ_T0013832.1 MGP_BALBcJ_G0011929.1 mouse_genomes_project 2 160149388 160149845 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052579.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 9986553 10067347 + MGP_BALBcJ_P0052579 Pter protein_coding protein_coding MGP_BALBcJ_T0052580.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 9986574 10037008 + Pter protein_coding processed_transcript MGP_BALBcJ_T0052581.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 9986581 10067348 + MGP_BALBcJ_P0052581 Pter protein_coding protein_coding MGP_BALBcJ_T0052582.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 9986604 10069822 + MGP_BALBcJ_P0052582 Pter protein_coding protein_coding MGP_BALBcJ_T0052583.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 9986612 10067981 + MGP_BALBcJ_P0052583 Pter protein_coding protein_coding MGP_BALBcJ_T0052584.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 9986613 10038390 + Pter protein_coding processed_transcript MGP_BALBcJ_T0052585.1 MGP_BALBcJ_G0025325.1 mouse_genomes_project 2 10034417 10068226 + Pter protein_coding retained_intron MGP_BALBcJ_T0017694.1 MGP_BALBcJ_G0015333.1 mouse_genomes_project 2 11141351 11144954 - Stamos processed_transcript antisense MGP_BALBcJ_T0017695.1 MGP_BALBcJ_G0015333.1 mouse_genomes_project 2 11143507 11144868 - Stamos processed_transcript retained_intron MGP_BALBcJ_T0013392.1 MGP_BALBcJ_G0011489.1 mouse_genomes_project 2 2124426 2125251 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052836.1 MGP_BALBcJ_G0025371.1 mouse_genomes_project 2 20217295 20278272 + MGP_BALBcJ_P0052836 4931423N10Rik protein_coding protein_coding MGP_BALBcJ_T0052837.1 MGP_BALBcJ_G0025371.1 mouse_genomes_project 2 20217316 20275775 + MGP_BALBcJ_P0052837 4931423N10Rik protein_coding protein_coding MGP_BALBcJ_T0053754.1 MGP_BALBcJ_G0025536.1 mouse_genomes_project 2 27489654 27509621 + MGP_BALBcJ_P0053754 Gm28038 protein_coding protein_coding MGP_BALBcJ_T0054445.1 MGP_BALBcJ_G0025642.1 mouse_genomes_project 2 33814268 33815207 + MGP_BALBcJ_P0054445 Olfr342 protein_coding protein_coding MGP_BALBcJ_T0011470.1 MGP_BALBcJ_G0009595.1 mouse_genomes_project 2 21666095 21666420 + Gm25455 misc_RNA misc_RNA MGP_BALBcJ_T0055841.1 MGP_BALBcJ_G0026042.1 mouse_genomes_project 2 86701796 86702723 - MGP_BALBcJ_P0055841 Olfr1208 protein_coding protein_coding MGP_BALBcJ_T0003950.1 MGP_BALBcJ_G0003526.1 mouse_genomes_project 2 35990437 35998399 + Nr5a1os antisense antisense MGP_BALBcJ_T0001091.1 MGP_BALBcJ_G0001018.1 mouse_genomes_project 2 127468537 127469578 - TEC TEC MGP_BALBcJ_T0003972.1 MGP_BALBcJ_G0003542.1 mouse_genomes_project 2 63299590 63307802 - Gm13619 antisense antisense MGP_BALBcJ_T0052597.1 MGP_BALBcJ_G0025328.1 mouse_genomes_project 2 10353323 10571163 - MGP_BALBcJ_P0052597 Cubn protein_coding protein_coding MGP_BALBcJ_T0052598.1 MGP_BALBcJ_G0025328.1 mouse_genomes_project 2 10500017 10534835 - Cubn protein_coding retained_intron MGP_BALBcJ_T0052599.1 MGP_BALBcJ_G0025328.1 mouse_genomes_project 2 10535847 10538688 - Cubn protein_coding retained_intron MGP_BALBcJ_T0056600.1 MGP_BALBcJ_G0026221.1 mouse_genomes_project 2 109054236 109073028 - MGP_BALBcJ_P0056600 Gm15130 protein_coding protein_coding MGP_BALBcJ_T0003934.1 MGP_BALBcJ_G0003513.1 mouse_genomes_project 2 29497680 29501281 - Gm13610 antisense antisense MGP_BALBcJ_T0057930.1 MGP_BALBcJ_G0026543.1 mouse_genomes_project 2 138617923 138669139 - MGP_BALBcJ_P0057930 Esf1 protein_coding protein_coding MGP_BALBcJ_T0057931.1 MGP_BALBcJ_G0026543.1 mouse_genomes_project 2 138646396 138653209 - Esf1 protein_coding retained_intron MGP_BALBcJ_T0057933.1 MGP_BALBcJ_G0026543.1 mouse_genomes_project 2 138654789 138658156 - Esf1 protein_coding retained_intron MGP_BALBcJ_T0057934.1 MGP_BALBcJ_G0026543.1 mouse_genomes_project 2 138654824 138656516 - Esf1 protein_coding retained_intron MGP_BALBcJ_T0057935.1 MGP_BALBcJ_G0026543.1 mouse_genomes_project 2 138657035 138658156 - Esf1 protein_coding retained_intron MGP_BALBcJ_T0007119.1 MGP_BALBcJ_G0005838.1 mouse_genomes_project 2 8350613 8405935 - 8030442B05Rik lincRNA lincRNA MGP_BALBcJ_T0054757.1 MGP_BALBcJ_G0025709.1 mouse_genomes_project 2 50586232 50643002 - MGP_BALBcJ_P0054757 Prpf40a protein_coding protein_coding MGP_BALBcJ_T0054758.1 MGP_BALBcJ_G0025709.1 mouse_genomes_project 2 50590695 50596833 - Prpf40a protein_coding processed_transcript MGP_BALBcJ_T0054759.1 MGP_BALBcJ_G0025709.1 mouse_genomes_project 2 50604567 50643061 - MGP_BALBcJ_P0054759 Prpf40a protein_coding protein_coding MGP_BALBcJ_T0054760.1 MGP_BALBcJ_G0025709.1 mouse_genomes_project 2 50624170 50642981 - Prpf40a protein_coding processed_transcript MGP_BALBcJ_T0054761.1 MGP_BALBcJ_G0025709.1 mouse_genomes_project 2 50627944 50643002 - Prpf40a protein_coding processed_transcript MGP_BALBcJ_T0013594.1 MGP_BALBcJ_G0011691.1 mouse_genomes_project 2 76615428 76615630 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055544.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81193709 81207559 + Zc3h15 protein_coding processed_transcript MGP_BALBcJ_T0055545.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81193732 81214404 + MGP_BALBcJ_P0055545 Zc3h15 protein_coding protein_coding MGP_BALBcJ_T0055546.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81193732 81213417 + MGP_BALBcJ_P0055546 Zc3h15 protein_coding unknown_likely_coding MGP_BALBcJ_T0055547.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81193765 81202784 + Zc3h15 protein_coding processed_transcript MGP_BALBcJ_T0055548.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81193851 81209426 + Zc3h15 protein_coding processed_transcript MGP_BALBcJ_T0055549.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81205874 81207322 + Zc3h15 protein_coding processed_transcript MGP_BALBcJ_T0055550.1 MGP_BALBcJ_G0025864.1 mouse_genomes_project 2 81206367 81210777 + Zc3h15 protein_coding processed_transcript MGP_BALBcJ_T0013600.1 MGP_BALBcJ_G0011697.1 mouse_genomes_project 2 78469666 78470794 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003975.1 MGP_BALBcJ_G0003545.1 mouse_genomes_project 2 63892448 64007816 + Gm13629 antisense antisense MGP_BALBcJ_T0003976.1 MGP_BALBcJ_G0003545.1 mouse_genomes_project 2 63892464 63972174 + Gm13629 antisense antisense MGP_BALBcJ_T0055629.1 MGP_BALBcJ_G0025882.1 mouse_genomes_project 2 82317603 82326457 + MGP_BALBcJ_P0055629 protein_coding protein_coding MGP_BALBcJ_T0055630.1 MGP_BALBcJ_G0025882.1 mouse_genomes_project 2 82317678 82329764 + MGP_BALBcJ_P0055630 protein_coding unknown_likely_coding MGP_BALBcJ_T0055631.1 MGP_BALBcJ_G0025882.1 mouse_genomes_project 2 82322765 82330637 + protein_coding processed_transcript MGP_BALBcJ_T0055632.1 MGP_BALBcJ_G0025882.1 mouse_genomes_project 2 82326294 82329842 + protein_coding retained_intron MGP_BALBcJ_T0017889.1 MGP_BALBcJ_G0015437.1 mouse_genomes_project 2 179275412 179277564 + 4921531C22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017890.1 MGP_BALBcJ_G0015437.1 mouse_genomes_project 2 179276000 179276538 + 4921531C22Rik processed_transcript processed_transcript MGP_BALBcJ_T0013414.1 MGP_BALBcJ_G0011511.1 mouse_genomes_project 2 12457706 12458679 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059482.1 MGP_BALBcJ_G0026915.1 mouse_genomes_project 2 171108513 171115744 - MGP_BALBcJ_P0059482 Cbln4 protein_coding protein_coding MGP_BALBcJ_T0055893.1 MGP_BALBcJ_G0026082.1 mouse_genomes_project 2 87616168 87617859 + MGP_BALBcJ_P0055893 protein_coding protein_coding MGP_BALBcJ_T0055133.1 MGP_BALBcJ_G0025780.1 mouse_genomes_project 2 67335766 67350220 - MGP_BALBcJ_P0055133 Mettl5 protein_coding protein_coding MGP_BALBcJ_T0055134.1 MGP_BALBcJ_G0025780.1 mouse_genomes_project 2 67335782 67350202 - MGP_BALBcJ_P0055134 Mettl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055135.1 MGP_BALBcJ_G0025780.1 mouse_genomes_project 2 67335786 67338904 - Mettl5 protein_coding retained_intron MGP_BALBcJ_T0055136.1 MGP_BALBcJ_G0025780.1 mouse_genomes_project 2 67342357 67350209 - Mettl5 protein_coding retained_intron MGP_BALBcJ_T0007183.1 MGP_BALBcJ_G0005887.1 mouse_genomes_project 2 49079366 49155863 - Gm13490 lincRNA lincRNA MGP_BALBcJ_T0054799.1 MGP_BALBcJ_G0025720.1 mouse_genomes_project 2 55815537 55945583 - Acvr1 protein_coding processed_transcript MGP_BALBcJ_T0054800.1 MGP_BALBcJ_G0025720.1 mouse_genomes_project 2 55876123 55957587 - MGP_BALBcJ_P0054800 Acvr1 protein_coding protein_coding MGP_BALBcJ_T0054801.1 MGP_BALBcJ_G0025720.1 mouse_genomes_project 2 55876132 55996385 - MGP_BALBcJ_P0054801 Acvr1 protein_coding protein_coding MGP_BALBcJ_T0054803.1 MGP_BALBcJ_G0025720.1 mouse_genomes_project 2 55906990 55968008 - MGP_BALBcJ_P0054803 Acvr1 protein_coding protein_coding MGP_BALBcJ_T0057402.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125034463 125119483 - MGP_BALBcJ_P0057402 Trpm7 protein_coding protein_coding MGP_BALBcJ_T0057403.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125034469 125119370 - MGP_BALBcJ_P0057403 Trpm7 protein_coding protein_coding MGP_BALBcJ_T0057404.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125034482 125038435 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0057405.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125035725 125045532 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0057406.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125035796 125040753 - MGP_BALBcJ_P0057406 Trpm7 protein_coding protein_coding MGP_BALBcJ_T0057407.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125039900 125040736 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0057408.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125040189 125047966 - Trpm7 protein_coding processed_transcript MGP_BALBcJ_T0057409.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125055811 125060407 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0057410.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125072008 125076595 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0057411.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125073581 125119439 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0057412.1 MGP_BALBcJ_G0026421.1 mouse_genomes_project 2 125073584 125076934 - Trpm7 protein_coding retained_intron MGP_BALBcJ_T0056621.1 MGP_BALBcJ_G0026241.1 mouse_genomes_project 2 109655578 109656517 + MGP_BALBcJ_P0056621 protein_coding protein_coding MGP_BALBcJ_T0055433.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74591609 74756129 - MGP_BALBcJ_P0055433 Ccdc141 protein_coding protein_coding MGP_BALBcJ_T0055434.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74591702 74756111 - MGP_BALBcJ_P0055434 Ccdc141 protein_coding protein_coding MGP_BALBcJ_T0055435.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74593254 74601933 - MGP_BALBcJ_P0055435 Ccdc141 protein_coding protein_coding MGP_BALBcJ_T0055436.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74597066 74604712 - Ccdc141 protein_coding processed_transcript MGP_BALBcJ_T0055437.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74605402 74612664 - Ccdc141 protein_coding retained_intron MGP_BALBcJ_T0055438.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74612661 74626084 - Ccdc141 protein_coding retained_intron MGP_BALBcJ_T0055439.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74612661 74626734 - MGP_BALBcJ_P0055439 Ccdc141 protein_coding protein_coding MGP_BALBcJ_T0055440.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74626974 74756130 - Ccdc141 protein_coding retained_intron MGP_BALBcJ_T0055441.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74656752 74756104 - Ccdc141 protein_coding retained_intron MGP_BALBcJ_T0055442.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74717734 74756094 - MGP_BALBcJ_P0055442 Ccdc141 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055443.1 MGP_BALBcJ_G0025843.1 mouse_genomes_project 2 74747474 74756070 - MGP_BALBcJ_P0055443 Ccdc141 protein_coding protein_coding MGP_BALBcJ_T0058677.1 MGP_BALBcJ_G0026733.1 mouse_genomes_project 2 154884808 154904643 - MGP_BALBcJ_P0058677 Nfs1 protein_coding protein_coding MGP_BALBcJ_T0058678.1 MGP_BALBcJ_G0026733.1 mouse_genomes_project 2 154884819 154900083 - MGP_BALBcJ_P0058678 Nfs1 protein_coding protein_coding MGP_BALBcJ_T0058679.1 MGP_BALBcJ_G0026733.1 mouse_genomes_project 2 154898760 154904610 - Nfs1 protein_coding retained_intron MGP_BALBcJ_T0058680.1 MGP_BALBcJ_G0026733.1 mouse_genomes_project 2 154902049 154904637 - MGP_BALBcJ_P0058680 Nfs1 protein_coding protein_coding MGP_BALBcJ_T0055739.1 MGP_BALBcJ_G0025952.1 mouse_genomes_project 2 84387265 84388207 - MGP_BALBcJ_P0055739 Olfr1090 protein_coding protein_coding MGP_BALBcJ_T0013517.1 MGP_BALBcJ_G0011614.1 mouse_genomes_project 2 49362873 49363410 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013421.1 MGP_BALBcJ_G0011518.1 mouse_genomes_project 2 15249316 15249730 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059775.1 MGP_BALBcJ_G0026987.1 mouse_genomes_project 2 180503478 180505003 + MGP_BALBcJ_P0059775 Ppdpf protein_coding protein_coding MGP_BALBcJ_T0059776.1 MGP_BALBcJ_G0026987.1 mouse_genomes_project 2 180503527 180504973 + Ppdpf protein_coding retained_intron MGP_BALBcJ_T0059777.1 MGP_BALBcJ_G0026987.1 mouse_genomes_project 2 180503567 180504736 + MGP_BALBcJ_P0059777 Ppdpf protein_coding protein_coding MGP_BALBcJ_T0059778.1 MGP_BALBcJ_G0026987.1 mouse_genomes_project 2 180503578 180504736 + Ppdpf protein_coding retained_intron MGP_BALBcJ_T0059779.1 MGP_BALBcJ_G0026987.1 mouse_genomes_project 2 180503767 180504736 + Ppdpf protein_coding retained_intron MGP_BALBcJ_T0059780.1 MGP_BALBcJ_G0026987.1 mouse_genomes_project 2 180504145 180504736 + Ppdpf protein_coding retained_intron MGP_BALBcJ_T0053210.1 MGP_BALBcJ_G0025446.1 mouse_genomes_project 2 22960891 22965145 - MGP_BALBcJ_P0053210 Sohlh1 protein_coding protein_coding MGP_BALBcJ_T0054018.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29547160 29556413 - MGP_BALBcJ_P0054018 Swi5 protein_coding protein_coding MGP_BALBcJ_T0054019.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29547160 29551209 - MGP_BALBcJ_P0054019 Swi5 protein_coding protein_coding MGP_BALBcJ_T0054020.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29547160 29556280 - MGP_BALBcJ_P0054020 Swi5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054021.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29547160 29556350 - MGP_BALBcJ_P0054021 Swi5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054022.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29547160 29556420 - MGP_BALBcJ_P0054022 Swi5 protein_coding protein_coding MGP_BALBcJ_T0054023.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29547262 29556414 - MGP_BALBcJ_P0054023 Swi5 protein_coding protein_coding MGP_BALBcJ_T0054024.1 MGP_BALBcJ_G0025574.1 mouse_genomes_project 2 29551625 29556376 - Swi5 protein_coding retained_intron MGP_BALBcJ_T0059090.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163346936 163350497 + Sys1 protein_coding processed_transcript MGP_BALBcJ_T0059091.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163346948 163355485 + MGP_BALBcJ_P0059091 Sys1 protein_coding protein_coding MGP_BALBcJ_T0059092.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163347060 163350869 + Sys1 protein_coding processed_transcript MGP_BALBcJ_T0059094.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163350531 163355481 + MGP_BALBcJ_P0059094 Sys1 protein_coding protein_coding MGP_BALBcJ_T0059095.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163350560 163364417 + MGP_BALBcJ_P0059095 Sys1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059096.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163350613 163370857 + MGP_BALBcJ_P0059096 Sys1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059097.1 MGP_BALBcJ_G0026827.1 mouse_genomes_project 2 163350869 163364417 + MGP_BALBcJ_P0059097 Sys1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056155.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001455 90179831 + MGP_BALBcJ_P0056155 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056156.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001524 90179837 + MGP_BALBcJ_P0056156 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056157.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001617 90032036 + Phf21a protein_coding processed_transcript MGP_BALBcJ_T0056158.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001625 90178895 + MGP_BALBcJ_P0056158 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056159.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001625 90138501 + MGP_BALBcJ_P0056159 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056160.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001651 90032545 + Phf21a protein_coding retained_intron MGP_BALBcJ_T0056161.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90001651 90039524 + MGP_BALBcJ_P0056161 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056162.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90002831 90039527 + MGP_BALBcJ_P0056162 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056163.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90002855 90178903 + MGP_BALBcJ_P0056163 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056164.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90003837 90039539 + MGP_BALBcJ_P0056164 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056165.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90031995 90046257 + MGP_BALBcJ_P0056165 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056166.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90039386 90182668 + MGP_BALBcJ_P0056166 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056167.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90039386 90182668 + MGP_BALBcJ_P0056167 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056168.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90039386 90182668 + MGP_BALBcJ_P0056168 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056169.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90039386 90182668 + MGP_BALBcJ_P0056169 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056170.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90039496 90182668 + MGP_BALBcJ_P0056170 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056171.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90039504 90145336 + MGP_BALBcJ_P0056171 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056172.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90046260 90178432 + MGP_BALBcJ_P0056172 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056173.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90138660 90148924 + MGP_BALBcJ_P0056173 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056174.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90148952 90177179 + MGP_BALBcJ_P0056174 Phf21a protein_coding protein_coding MGP_BALBcJ_T0056175.1 MGP_BALBcJ_G0026133.1 mouse_genomes_project 2 90166912 90174995 + Phf21a protein_coding retained_intron MGP_BALBcJ_T0102399.1 MGP_BALBcJ_G0040215.1 mouse_genomes_project 2 83113500 83114421 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0056758.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116555478 116577962 - MGP_BALBcJ_P0056758 Bmf protein_coding protein_coding MGP_BALBcJ_T0056759.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116556953 116575830 - MGP_BALBcJ_P0056759 Bmf protein_coding protein_coding MGP_BALBcJ_T0056760.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116558691 116572844 - Bmf protein_coding processed_transcript MGP_BALBcJ_T0056761.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116558772 116573575 - Bmf protein_coding processed_transcript MGP_BALBcJ_T0056762.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116559138 116577937 - Bmf protein_coding processed_transcript MGP_BALBcJ_T0056763.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116573442 116575286 - Bmf protein_coding processed_transcript MGP_BALBcJ_T0056764.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116573494 116575870 - Bmf protein_coding processed_transcript MGP_BALBcJ_T0056765.1 MGP_BALBcJ_G0026290.1 mouse_genomes_project 2 116575167 116577950 - Bmf protein_coding processed_transcript MGP_BALBcJ_T0004024.1 MGP_BALBcJ_G0003578.1 mouse_genomes_project 2 100641351 100650204 - Gm13872 antisense antisense MGP_BALBcJ_T0004025.1 MGP_BALBcJ_G0003578.1 mouse_genomes_project 2 100647095 100650191 - Gm13872 antisense antisense MGP_BALBcJ_T0004026.1 MGP_BALBcJ_G0003578.1 mouse_genomes_project 2 100648082 100650205 - Gm13872 antisense antisense MGP_BALBcJ_T0055689.1 MGP_BALBcJ_G0025904.1 mouse_genomes_project 2 83195520 83215396 - MGP_BALBcJ_P0055689 Olfr1006 protein_coding protein_coding MGP_BALBcJ_T0056786.1 MGP_BALBcJ_G0026297.1 mouse_genomes_project 2 116814850 116847339 + MGP_BALBcJ_P0056786 Disp2 protein_coding protein_coding MGP_BALBcJ_T0056787.1 MGP_BALBcJ_G0026297.1 mouse_genomes_project 2 116814853 116831095 + MGP_BALBcJ_P0056787 Disp2 protein_coding protein_coding MGP_BALBcJ_T0056788.1 MGP_BALBcJ_G0026297.1 mouse_genomes_project 2 116814870 116847458 + MGP_BALBcJ_P0056788 Disp2 protein_coding protein_coding MGP_BALBcJ_T0056789.1 MGP_BALBcJ_G0026297.1 mouse_genomes_project 2 116814873 116825965 + MGP_BALBcJ_P0056789 Disp2 protein_coding protein_coding MGP_BALBcJ_T0056790.1 MGP_BALBcJ_G0026297.1 mouse_genomes_project 2 116814890 116825964 + Disp2 protein_coding retained_intron MGP_BALBcJ_T0056601.1 MGP_BALBcJ_G0026222.1 mouse_genomes_project 2 109082887 109129522 - MGP_BALBcJ_P0056601 4930430A15Rik protein_coding protein_coding MGP_BALBcJ_T0056602.1 MGP_BALBcJ_G0026222.1 mouse_genomes_project 2 109117740 109154192 - MGP_BALBcJ_P0056602 4930430A15Rik protein_coding protein_coding MGP_BALBcJ_T0102419.1 MGP_BALBcJ_G0040235.1 mouse_genomes_project 2 85566138 85566583 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0055528.1 MGP_BALBcJ_G0025859.1 mouse_genomes_project 2 78209920 78224151 + MGP_BALBcJ_P0055528 Dusp19 protein_coding protein_coding MGP_BALBcJ_T0055529.1 MGP_BALBcJ_G0025859.1 mouse_genomes_project 2 78209975 78224220 + Dusp19 protein_coding processed_transcript MGP_BALBcJ_T0055530.1 MGP_BALBcJ_G0025859.1 mouse_genomes_project 2 78210101 78223314 + Dusp19 protein_coding processed_transcript MGP_BALBcJ_T0055531.1 MGP_BALBcJ_G0025859.1 mouse_genomes_project 2 78210106 78217145 + Dusp19 protein_coding processed_transcript MGP_BALBcJ_T0055533.1 MGP_BALBcJ_G0025859.1 mouse_genomes_project 2 78210141 78224858 + Dusp19 protein_coding processed_transcript MGP_BALBcJ_T0013585.1 MGP_BALBcJ_G0011682.1 mouse_genomes_project 2 73403965 73404731 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017740.1 MGP_BALBcJ_G0015360.1 mouse_genomes_project 2 54667912 54670194 - A930012O16Rik processed_transcript processed_transcript MGP_BALBcJ_T0017741.1 MGP_BALBcJ_G0015360.1 mouse_genomes_project 2 54667912 54670194 - A930012O16Rik processed_transcript processed_transcript MGP_BALBcJ_T0001016.1 MGP_BALBcJ_G0000944.1 mouse_genomes_project 2 6631072 6631768 - TEC TEC MGP_BALBcJ_T0059045.1 MGP_BALBcJ_G0026807.1 mouse_genomes_project 2 162725721 162786636 - MGP_BALBcJ_P0059045 Rims4 protein_coding protein_coding MGP_BALBcJ_T0001015.1 MGP_BALBcJ_G0000943.1 mouse_genomes_project 2 3926852 3937221 + TEC TEC MGP_BALBcJ_T0052973.1 MGP_BALBcJ_G0025395.1 mouse_genomes_project 2 22280407 22284328 - MGP_BALBcJ_P0052973 Tor4a protein_coding protein_coding MGP_BALBcJ_T0052974.1 MGP_BALBcJ_G0025395.1 mouse_genomes_project 2 22282498 22284201 - MGP_BALBcJ_P0052974 Tor4a protein_coding protein_coding MGP_BALBcJ_T0052975.1 MGP_BALBcJ_G0025395.1 mouse_genomes_project 2 22283233 22284213 - MGP_BALBcJ_P0052975 Tor4a protein_coding protein_coding MGP_BALBcJ_T0057963.1 MGP_BALBcJ_G0026550.1 mouse_genomes_project 2 141582826 141592641 + MGP_BALBcJ_P0057963 Snrpb2 protein_coding protein_coding MGP_BALBcJ_T0057964.1 MGP_BALBcJ_G0026550.1 mouse_genomes_project 2 141582848 141585522 + Snrpb2 protein_coding retained_intron MGP_BALBcJ_T0057965.1 MGP_BALBcJ_G0026550.1 mouse_genomes_project 2 141582918 141589212 + MGP_BALBcJ_P0057965 Snrpb2 protein_coding protein_coding MGP_BALBcJ_T0057966.1 MGP_BALBcJ_G0026550.1 mouse_genomes_project 2 141584189 141589212 + Snrpb2 protein_coding retained_intron MGP_BALBcJ_T0057967.1 MGP_BALBcJ_G0026550.1 mouse_genomes_project 2 141587960 141592641 + Snrpb2 protein_coding retained_intron MGP_BALBcJ_T0013541.1 MGP_BALBcJ_G0011638.1 mouse_genomes_project 2 56763490 56764286 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013566.1 MGP_BALBcJ_G0011663.1 mouse_genomes_project 2 67227952 67228577 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059270.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164703655 164807903 - MGP_BALBcJ_P0059270 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059271.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164703655 164781203 - MGP_BALBcJ_P0059271 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059272.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164703658 164805427 - MGP_BALBcJ_P0059272 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059273.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164703658 164805427 - MGP_BALBcJ_P0059273 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059274.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164704866 164807924 - MGP_BALBcJ_P0059274 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059275.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164704893 164807800 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059276.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164704893 164801578 - MGP_BALBcJ_P0059276 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059277.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164705103 164808026 - MGP_BALBcJ_P0059277 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059278.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164749288 164798926 - MGP_BALBcJ_P0059278 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059279.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164749344 164820263 - MGP_BALBcJ_P0059279 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059280.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164756260 164781203 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059281.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164763107 164823464 - MGP_BALBcJ_P0059281 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059282.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164765846 164785026 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059283.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164768808 164775182 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059284.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164775092 164799749 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059285.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164775092 164799557 - MGP_BALBcJ_P0059285 Zmynd8 protein_coding protein_coding MGP_BALBcJ_T0059286.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164775093 164803062 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059287.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164796156 164807361 - Zmynd8 protein_coding processed_transcript MGP_BALBcJ_T0059288.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164798019 164807390 - Zmynd8 protein_coding retained_intron MGP_BALBcJ_T0059289.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164798297 164799339 - Zmynd8 protein_coding retained_intron MGP_BALBcJ_T0059290.1 MGP_BALBcJ_G0026873.1 mouse_genomes_project 2 164798405 164807903 - Zmynd8 protein_coding retained_intron MGP_BALBcJ_T0004066.1 MGP_BALBcJ_G0003605.1 mouse_genomes_project 2 127453217 127455244 - Gm14029 antisense antisense MGP_BALBcJ_T0057953.1 MGP_BALBcJ_G0026548.1 mouse_genomes_project 2 139164008 139184530 - Flrt3 protein_coding processed_transcript MGP_BALBcJ_T0057954.1 MGP_BALBcJ_G0026548.1 mouse_genomes_project 2 139171292 139184549 - MGP_BALBcJ_P0057954 Flrt3 protein_coding protein_coding MGP_BALBcJ_T0057955.1 MGP_BALBcJ_G0026548.1 mouse_genomes_project 2 139172413 139184480 - MGP_BALBcJ_P0057955 Flrt3 protein_coding protein_coding MGP_BALBcJ_T0013705.1 MGP_BALBcJ_G0011802.1 mouse_genomes_project 2 115072639 115073515 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055407.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74285829 74562837 - MGP_BALBcJ_P0055407 Ttn protein_coding protein_coding MGP_BALBcJ_T0055408.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74285829 74562837 - MGP_BALBcJ_P0055408 Ttn protein_coding protein_coding MGP_BALBcJ_T0055409.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74285833 74562929 - MGP_BALBcJ_P0055409 Ttn protein_coding protein_coding MGP_BALBcJ_T0055410.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74286880 74560564 - MGP_BALBcJ_P0055410 Ttn protein_coding unknown_likely_coding MGP_BALBcJ_T0055411.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74286880 74560564 - MGP_BALBcJ_P0055411 Ttn protein_coding protein_coding MGP_BALBcJ_T0055412.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74396592 74515601 - MGP_BALBcJ_P0055412 Ttn protein_coding protein_coding MGP_BALBcJ_T0055413.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74397100 74472826 - MGP_BALBcJ_P0055413 Ttn protein_coding protein_coding MGP_BALBcJ_T0055414.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74397134 74451291 - MGP_BALBcJ_P0055414 Ttn protein_coding protein_coding MGP_BALBcJ_T0055415.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74397135 74451291 - MGP_BALBcJ_P0055415 Ttn protein_coding protein_coding MGP_BALBcJ_T0055416.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74397135 74451291 - MGP_BALBcJ_P0055416 Ttn protein_coding protein_coding MGP_BALBcJ_T0055417.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74397135 74451291 - MGP_BALBcJ_P0055417 Ttn protein_coding protein_coding MGP_BALBcJ_T0055418.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74397153 74451291 - MGP_BALBcJ_P0055418 Ttn protein_coding protein_coding MGP_BALBcJ_T0055419.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74403514 74408926 - MGP_BALBcJ_P0055419 Ttn protein_coding protein_coding MGP_BALBcJ_T0055420.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74404913 74424039 - MGP_BALBcJ_P0055420 Ttn protein_coding protein_coding MGP_BALBcJ_T0055421.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74410963 74411766 - MGP_BALBcJ_P0055421 Ttn protein_coding protein_coding MGP_BALBcJ_T0055422.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74413960 74414772 - MGP_BALBcJ_P0055422 Ttn protein_coding protein_coding MGP_BALBcJ_T0055423.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74418850 74421782 - MGP_BALBcJ_P0055423 Ttn protein_coding protein_coding MGP_BALBcJ_T0055424.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74418850 74419700 - MGP_BALBcJ_P0055424 Ttn protein_coding protein_coding MGP_BALBcJ_T0055425.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74427114 74430073 - MGP_BALBcJ_P0055425 Ttn protein_coding protein_coding MGP_BALBcJ_T0055426.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74432173 74453513 - MGP_BALBcJ_P0055426 Ttn protein_coding protein_coding MGP_BALBcJ_T0055427.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74471651 74472408 - Ttn protein_coding processed_transcript MGP_BALBcJ_T0055428.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74497144 74562837 - MGP_BALBcJ_P0055428 Ttn protein_coding protein_coding MGP_BALBcJ_T0055429.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74519284 74521885 - Ttn protein_coding retained_intron MGP_BALBcJ_T0055430.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74544951 74562929 - Ttn protein_coding retained_intron MGP_BALBcJ_T0055431.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74545757 74562929 - MGP_BALBcJ_P0055431 Ttn protein_coding protein_coding MGP_BALBcJ_T0055432.1 MGP_BALBcJ_G0025842.1 mouse_genomes_project 2 74553718 74562929 - Ttn protein_coding retained_intron MGP_BALBcJ_T0004161.1 MGP_BALBcJ_G0003679.1 mouse_genomes_project 2 172132653 172141547 - Gm14453 antisense antisense MGP_BALBcJ_T0053083.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22496014 22503440 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053084.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22497132 22505278 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053085.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22499779 22506563 + MGP_BALBcJ_P0053085 Npdc1 protein_coding protein_coding MGP_BALBcJ_T0053086.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22499815 22503948 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053087.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22499877 22504947 + MGP_BALBcJ_P0053087 Npdc1 protein_coding protein_coding MGP_BALBcJ_T0053088.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22499879 22506563 + MGP_BALBcJ_P0053088 Npdc1 protein_coding protein_coding MGP_BALBcJ_T0053089.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22499902 22505415 + MGP_BALBcJ_P0053089 Npdc1 protein_coding protein_coding MGP_BALBcJ_T0053090.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22499947 22504211 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053091.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22500156 22505103 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053092.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22500793 22506560 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053093.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22503406 22506563 + MGP_BALBcJ_P0053093 Npdc1 protein_coding protein_coding MGP_BALBcJ_T0053094.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22504381 22506325 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053095.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22504791 22506557 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0053096.1 MGP_BALBcJ_G0025417.1 mouse_genomes_project 2 22505941 22506560 + Npdc1 protein_coding processed_transcript MGP_BALBcJ_T0013498.1 MGP_BALBcJ_G0011595.1 mouse_genomes_project 2 43008627 43009040 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100972.1 MGP_BALBcJ_G0039008.1 mouse_genomes_project 2 110507486 110507615 + Gm22676 snoRNA snoRNA MGP_BALBcJ_T0010383.1 MGP_BALBcJ_G0008508.1 mouse_genomes_project 2 29587626 29587705 + Gm23363 miRNA miRNA MGP_BALBcJ_T0055711.1 MGP_BALBcJ_G0025925.1 mouse_genomes_project 2 83601016 83601949 + MGP_BALBcJ_P0055711 protein_coding protein_coding MGP_BALBcJ_T0058029.1 MGP_BALBcJ_G0026567.1 mouse_genomes_project 2 143125541 143294468 + MGP_BALBcJ_P0058029 Dtd1 protein_coding protein_coding MGP_BALBcJ_T0058030.1 MGP_BALBcJ_G0026567.1 mouse_genomes_project 2 143142423 143294150 + Dtd1 protein_coding processed_transcript MGP_BALBcJ_T0058031.1 MGP_BALBcJ_G0026567.1 mouse_genomes_project 2 143202992 143272297 + Dtd1 protein_coding processed_transcript MGP_BALBcJ_T0058032.1 MGP_BALBcJ_G0026567.1 mouse_genomes_project 2 143258523 143294204 + Dtd1 protein_coding processed_transcript MGP_BALBcJ_T0058033.1 MGP_BALBcJ_G0026567.1 mouse_genomes_project 2 143263707 143293985 + Dtd1 protein_coding processed_transcript MGP_BALBcJ_T0013641.1 MGP_BALBcJ_G0011738.1 mouse_genomes_project 2 90050886 90051219 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055717.1 MGP_BALBcJ_G0025931.1 mouse_genomes_project 2 83759099 83760059 - MGP_BALBcJ_P0055717 Olfr52 protein_coding protein_coding MGP_BALBcJ_T0003917.1 MGP_BALBcJ_G0003498.1 mouse_genomes_project 2 24287897 24306378 - Dbhos antisense antisense MGP_BALBcJ_T0055388.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 73994713 73996137 + Osbpl6 protein_coding processed_transcript MGP_BALBcJ_T0055389.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 73994743 74182390 + MGP_BALBcJ_P0055389 Osbpl6 protein_coding protein_coding MGP_BALBcJ_T0055390.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 73994743 74182394 + MGP_BALBcJ_P0055390 Osbpl6 protein_coding protein_coding MGP_BALBcJ_T0055391.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 73994763 74178343 + MGP_BALBcJ_P0055391 Osbpl6 protein_coding protein_coding MGP_BALBcJ_T0055392.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 73994766 73995673 + Osbpl6 protein_coding processed_transcript MGP_BALBcJ_T0055393.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 74080631 74123341 + Osbpl6 protein_coding processed_transcript MGP_BALBcJ_T0055394.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 74130086 74177792 + MGP_BALBcJ_P0055394 Osbpl6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055395.1 MGP_BALBcJ_G0025837.1 mouse_genomes_project 2 74149866 74161800 + Osbpl6 protein_coding processed_transcript MGP_BALBcJ_T0004047.1 MGP_BALBcJ_G0003589.1 mouse_genomes_project 2 113563964 113587937 - Gm13977 antisense antisense MGP_BALBcJ_T0055565.1 MGP_BALBcJ_G0025868.1 mouse_genomes_project 2 81506082 81509195 + MGP_BALBcJ_P0055565 protein_coding protein_coding MGP_BALBcJ_T0055910.1 MGP_BALBcJ_G0026092.1 mouse_genomes_project 2 87837732 87838641 - MGP_BALBcJ_P0055910 Olfr140 protein_coding protein_coding MGP_BALBcJ_T0055911.1 MGP_BALBcJ_G0026092.1 mouse_genomes_project 2 87837732 87849973 - MGP_BALBcJ_P0055911 Olfr140 protein_coding protein_coding MGP_BALBcJ_T0013503.1 MGP_BALBcJ_G0011600.1 mouse_genomes_project 2 45831900 45832214 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056633.1 MGP_BALBcJ_G0026253.1 mouse_genomes_project 2 110062589 110063525 - MGP_BALBcJ_P0056633 Olfr1313 protein_coding protein_coding MGP_BALBcJ_T0100989.1 MGP_BALBcJ_G0039025.1 mouse_genomes_project 2 148136658 148136750 - Gm24551 snoRNA snoRNA MGP_BALBcJ_T0003961.1 MGP_BALBcJ_G0003534.1 mouse_genomes_project 2 57733075 57767593 + Gm13571 antisense antisense MGP_BALBcJ_T0003962.1 MGP_BALBcJ_G0003534.1 mouse_genomes_project 2 57751244 57760242 + Gm13571 antisense antisense MGP_BALBcJ_T0058999.1 MGP_BALBcJ_G0026793.1 mouse_genomes_project 2 161951715 161952537 - MGP_BALBcJ_P0058999 Gtsf1l protein_coding protein_coding MGP_BALBcJ_T0058411.1 MGP_BALBcJ_G0026681.1 mouse_genomes_project 2 152669442 152677199 + MGP_BALBcJ_P0058411 Bpifa2 protein_coding protein_coding MGP_BALBcJ_T0058412.1 MGP_BALBcJ_G0026681.1 mouse_genomes_project 2 152669453 152675619 + MGP_BALBcJ_P0058412 Bpifa2 protein_coding protein_coding MGP_BALBcJ_T0058413.1 MGP_BALBcJ_G0026681.1 mouse_genomes_project 2 152674887 152676785 + Bpifa2 protein_coding retained_intron MGP_BALBcJ_T0058414.1 MGP_BALBcJ_G0026681.1 mouse_genomes_project 2 152675770 152677199 + Bpifa2 protein_coding retained_intron MGP_BALBcJ_T0013469.1 MGP_BALBcJ_G0011566.1 mouse_genomes_project 2 32802310 32802617 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004096.1 MGP_BALBcJ_G0003625.1 mouse_genomes_project 2 142581914 142591583 - Banf2os antisense antisense MGP_BALBcJ_T0004097.1 MGP_BALBcJ_G0003625.1 mouse_genomes_project 2 142582341 142591560 - Banf2os antisense antisense MGP_BALBcJ_T0055356.1 MGP_BALBcJ_G0025824.1 mouse_genomes_project 2 72280341 72297278 + Hoxd4 protein_coding processed_transcript MGP_BALBcJ_T0055357.1 MGP_BALBcJ_G0025824.1 mouse_genomes_project 2 72290388 72297570 + MGP_BALBcJ_P0055357 Hoxd4 protein_coding protein_coding MGP_BALBcJ_T0055359.1 MGP_BALBcJ_G0025824.1 mouse_genomes_project 2 72295483 72297533 + MGP_BALBcJ_P0055359 Hoxd4 protein_coding protein_coding MGP_BALBcJ_T0053604.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26963094 26990138 - MGP_BALBcJ_P0053604 Trub2 protein_coding protein_coding MGP_BALBcJ_T0053606.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26976780 26990150 - MGP_BALBcJ_P0053606 Trub2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053607.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26978239 26990992 - MGP_BALBcJ_P0053607 Trub2 protein_coding protein_coding MGP_BALBcJ_T0053608.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26979583 26990124 - MGP_BALBcJ_P0053608 Trub2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053609.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26979652 26990112 - MGP_BALBcJ_P0053609 Trub2 protein_coding protein_coding MGP_BALBcJ_T0053610.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26980489 26990161 - MGP_BALBcJ_P0053610 Trub2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053611.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26980648 26984846 - Trub2 protein_coding retained_intron MGP_BALBcJ_T0053612.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26981130 26984700 - Trub2 protein_coding retained_intron MGP_BALBcJ_T0053613.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26985722 26990120 - Trub2 protein_coding retained_intron MGP_BALBcJ_T0053614.1 MGP_BALBcJ_G0025515.1 mouse_genomes_project 2 26987423 26990123 - Trub2 protein_coding retained_intron MGP_BALBcJ_T0099718.1 MGP_BALBcJ_G0037754.1 mouse_genomes_project 2 180998347 180998454 + Gm25879 snRNA snRNA MGP_BALBcJ_T0007251.1 MGP_BALBcJ_G0005943.1 mouse_genomes_project 2 94839594 94940164 - 4930445B16Rik lincRNA lincRNA MGP_BALBcJ_T0013591.1 MGP_BALBcJ_G0011688.1 mouse_genomes_project 2 76234631 76235129 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013485.1 MGP_BALBcJ_G0011582.1 mouse_genomes_project 2 36594600 36595365 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011492.1 MGP_BALBcJ_G0009617.1 mouse_genomes_project 2 125728718 125729010 - Gm22613 misc_RNA misc_RNA MGP_BALBcJ_T0052787.1 MGP_BALBcJ_G0025363.1 mouse_genomes_project 2 19329205 19618562 + MGP_BALBcJ_P0052787 Myo3a protein_coding protein_coding MGP_BALBcJ_T0052788.1 MGP_BALBcJ_G0025363.1 mouse_genomes_project 2 19329207 19395742 + Myo3a protein_coding processed_transcript MGP_BALBcJ_T0052789.1 MGP_BALBcJ_G0025363.1 mouse_genomes_project 2 19329207 19386186 + Myo3a protein_coding processed_transcript MGP_BALBcJ_T0052790.1 MGP_BALBcJ_G0025363.1 mouse_genomes_project 2 19342792 19512743 + MGP_BALBcJ_P0052790 Myo3a protein_coding protein_coding MGP_BALBcJ_T0052791.1 MGP_BALBcJ_G0025363.1 mouse_genomes_project 2 19549889 19618557 + MGP_BALBcJ_P0052791 Myo3a protein_coding protein_coding MGP_BALBcJ_T0052792.1 MGP_BALBcJ_G0025363.1 mouse_genomes_project 2 19580509 19605924 + Myo3a protein_coding processed_transcript MGP_BALBcJ_T0010339.1 MGP_BALBcJ_G0008464.1 mouse_genomes_project 2 7514899 7515002 + Gm22239 miRNA miRNA MGP_BALBcJ_T0052481.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8478832 8563224 - MGP_BALBcJ_P0052481 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052482.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8479190 8509497 - MGP_BALBcJ_P0052482 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052483.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8479223 8509497 - MGP_BALBcJ_P0052483 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052484.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8479225 8509497 - MGP_BALBcJ_P0052484 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052485.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8479225 8563069 - MGP_BALBcJ_P0052485 Pfkfb3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052486.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8479227 8505789 - Pfkfb3 protein_coding processed_transcript MGP_BALBcJ_T0052487.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8481806 8509497 - MGP_BALBcJ_P0052487 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052488.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8481806 8509096 - MGP_BALBcJ_P0052488 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052489.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8481806 8509497 - MGP_BALBcJ_P0052489 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052490.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8481806 8509497 - MGP_BALBcJ_P0052490 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052491.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8483163 8509486 - MGP_BALBcJ_P0052491 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052492.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8483163 8509486 - MGP_BALBcJ_P0052492 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052493.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8485354 8509497 - MGP_BALBcJ_P0052493 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052494.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8485366 8509497 - MGP_BALBcJ_P0052494 Pfkfb3 protein_coding protein_coding MGP_BALBcJ_T0052495.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8487298 8509471 - Pfkfb3 protein_coding retained_intron MGP_BALBcJ_T0052496.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8488408 8489510 - Pfkfb3 protein_coding retained_intron MGP_BALBcJ_T0052497.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8497745 8509413 - Pfkfb3 protein_coding processed_transcript MGP_BALBcJ_T0052498.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8499708 8509193 - Pfkfb3 protein_coding retained_intron MGP_BALBcJ_T0052499.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8500008 8505755 - Pfkfb3 protein_coding processed_transcript MGP_BALBcJ_T0052500.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8500035 8508692 - Pfkfb3 protein_coding retained_intron MGP_BALBcJ_T0052501.1 MGP_BALBcJ_G0025316.1 mouse_genomes_project 2 8501304 8508259 - Pfkfb3 protein_coding processed_transcript MGP_BALBcJ_T0053478.1 MGP_BALBcJ_G0025489.1 mouse_genomes_project 2 24836533 24904642 + MGP_BALBcJ_P0053478 Rxra protein_coding protein_coding MGP_BALBcJ_T0053479.1 MGP_BALBcJ_G0025489.1 mouse_genomes_project 2 24871540 24923000 + MGP_BALBcJ_P0053479 Rxra protein_coding protein_coding MGP_BALBcJ_T0053480.1 MGP_BALBcJ_G0025489.1 mouse_genomes_project 2 24872831 24923000 + MGP_BALBcJ_P0053480 Rxra protein_coding protein_coding MGP_BALBcJ_T0053481.1 MGP_BALBcJ_G0025489.1 mouse_genomes_project 2 24900042 24925774 + MGP_BALBcJ_P0053481 Rxra protein_coding protein_coding MGP_BALBcJ_T0053482.1 MGP_BALBcJ_G0025489.1 mouse_genomes_project 2 24900042 24924234 + MGP_BALBcJ_P0053482 Rxra protein_coding protein_coding MGP_BALBcJ_T0053483.1 MGP_BALBcJ_G0025489.1 mouse_genomes_project 2 24902944 24911488 + Rxra protein_coding processed_transcript MGP_BALBcJ_T0057693.1 MGP_BALBcJ_G0026493.1 mouse_genomes_project 2 129324399 129465367 + MGP_BALBcJ_P0057693 Atrn protein_coding protein_coding MGP_BALBcJ_T0057694.1 MGP_BALBcJ_G0026493.1 mouse_genomes_project 2 129324405 129440221 + Atrn protein_coding retained_intron MGP_BALBcJ_T0057695.1 MGP_BALBcJ_G0026493.1 mouse_genomes_project 2 129324835 129369051 + Atrn protein_coding retained_intron MGP_BALBcJ_T0057696.1 MGP_BALBcJ_G0026493.1 mouse_genomes_project 2 129417485 129429295 + Atrn protein_coding retained_intron MGP_BALBcJ_T0057697.1 MGP_BALBcJ_G0026493.1 mouse_genomes_project 2 129430939 129440710 + Atrn protein_coding retained_intron MGP_BALBcJ_T0102407.1 MGP_BALBcJ_G0040223.1 mouse_genomes_project 2 84027082 84029321 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0054142.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29955589 29967419 - MGP_BALBcJ_P0054142 Fpgs protein_coding protein_coding MGP_BALBcJ_T0054143.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29955590 29967369 - Fpgs protein_coding retained_intron MGP_BALBcJ_T0054144.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29955797 29958937 - Fpgs protein_coding retained_intron MGP_BALBcJ_T0054145.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29956282 29957985 - Fpgs protein_coding processed_transcript MGP_BALBcJ_T0054146.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29959482 29960483 - Fpgs protein_coding retained_intron MGP_BALBcJ_T0054147.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29959829 29977308 - MGP_BALBcJ_P0054147 Fpgs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054148.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29959994 29960818 - Fpgs protein_coding retained_intron MGP_BALBcJ_T0054149.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29960396 29977316 - MGP_BALBcJ_P0054149 Fpgs protein_coding protein_coding MGP_BALBcJ_T0054150.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29965684 29966478 - Fpgs protein_coding retained_intron MGP_BALBcJ_T0054151.1 MGP_BALBcJ_G0025591.1 mouse_genomes_project 2 29965946 29977202 - MGP_BALBcJ_P0054151 Fpgs protein_coding protein_coding MGP_BALBcJ_T0053464.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24596254 24626640 - MGP_BALBcJ_P0053464 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053465.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24596254 24626928 - MGP_BALBcJ_P0053465 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053466.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24596275 24626915 - MGP_BALBcJ_P0053466 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053467.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24598518 24615195 - MGP_BALBcJ_P0053467 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053468.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24600049 24661231 - MGP_BALBcJ_P0053468 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053469.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24600049 24626896 - MGP_BALBcJ_P0053469 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053470.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24603898 24626895 - Brd3 protein_coding processed_transcript MGP_BALBcJ_T0053471.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24614609 24626849 - MGP_BALBcJ_P0053471 Brd3 protein_coding protein_coding MGP_BALBcJ_T0053472.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24614970 24615661 - Brd3 protein_coding processed_transcript MGP_BALBcJ_T0053473.1 MGP_BALBcJ_G0025487.1 mouse_genomes_project 2 24615077 24626423 - Brd3 protein_coding processed_transcript MGP_BALBcJ_T0053891.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28270468 28388035 - MGP_BALBcJ_P0053891 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053892.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28270469 28341648 - MGP_BALBcJ_P0053892 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053893.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28270469 28388241 - MGP_BALBcJ_P0053893 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053894.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28270470 28388229 - MGP_BALBcJ_P0053894 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053895.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28271057 28388190 - MGP_BALBcJ_P0053895 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053896.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28272457 28341648 - Fnbp1 protein_coding processed_transcript MGP_BALBcJ_T0053897.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28277680 28350451 - MGP_BALBcJ_P0053897 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053898.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28277985 28388035 - MGP_BALBcJ_P0053898 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053899.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28277996 28388035 - MGP_BALBcJ_P0053899 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053900.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28277996 28388035 - MGP_BALBcJ_P0053900 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053901.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28277996 28388035 - MGP_BALBcJ_P0053901 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053902.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28277996 28293651 - MGP_BALBcJ_P0053902 Fnbp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0053903.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28278077 28300967 - MGP_BALBcJ_P0053903 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053904.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28298544 28388172 - MGP_BALBcJ_P0053904 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053905.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28301089 28388188 - MGP_BALBcJ_P0053905 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053906.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28304470 28361793 - MGP_BALBcJ_P0053906 Fnbp1 protein_coding protein_coding MGP_BALBcJ_T0053907.1 MGP_BALBcJ_G0025555.1 mouse_genomes_project 2 28341238 28350549 - Fnbp1 protein_coding processed_transcript MGP_BALBcJ_T0056631.1 MGP_BALBcJ_G0026251.1 mouse_genomes_project 2 110024447 110025386 - MGP_BALBcJ_P0056631 protein_coding protein_coding MGP_BALBcJ_T0057969.1 MGP_BALBcJ_G0026552.1 mouse_genomes_project 2 142062380 142322778 + MGP_BALBcJ_P0057969 Pcsk2 protein_coding protein_coding MGP_BALBcJ_T0057970.1 MGP_BALBcJ_G0026552.1 mouse_genomes_project 2 142062495 142093933 + Pcsk2 protein_coding processed_transcript MGP_BALBcJ_T0054770.1 MGP_BALBcJ_G0025713.1 mouse_genomes_project 2 52875114 53044596 + MGP_BALBcJ_P0054770 Kcnj3 protein_coding protein_coding MGP_BALBcJ_T0054771.1 MGP_BALBcJ_G0025713.1 mouse_genomes_project 2 52876300 53041976 + MGP_BALBcJ_P0054771 Kcnj3 protein_coding protein_coding MGP_BALBcJ_T0054772.1 MGP_BALBcJ_G0025713.1 mouse_genomes_project 2 52876309 53044591 + MGP_BALBcJ_P0054772 Kcnj3 protein_coding protein_coding MGP_BALBcJ_T0013535.1 MGP_BALBcJ_G0011632.1 mouse_genomes_project 2 55760516 55769904 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057519.1 MGP_BALBcJ_G0026449.1 mouse_genomes_project 2 126855467 126858486 + MGP_BALBcJ_P0057519 protein_coding protein_coding MGP_BALBcJ_T0057520.1 MGP_BALBcJ_G0026449.1 mouse_genomes_project 2 126855530 126863254 + MGP_BALBcJ_P0057520 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057521.1 MGP_BALBcJ_G0026449.1 mouse_genomes_project 2 126858806 126861463 + MGP_BALBcJ_P0057521 protein_coding protein_coding MGP_BALBcJ_T0101669.1 MGP_BALBcJ_G0039661.1 mouse_genomes_project 2 72426829 72427435 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0057996.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142891837 142896248 + Csrp2bp protein_coding processed_transcript MGP_BALBcJ_T0057998.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142891848 142930725 + MGP_BALBcJ_P0057998 Csrp2bp protein_coding protein_coding MGP_BALBcJ_T0057999.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142896657 142916211 + MGP_BALBcJ_P0057999 Csrp2bp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058000.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142898241 142912197 + Csrp2bp protein_coding processed_transcript MGP_BALBcJ_T0058001.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142898706 142923910 + Csrp2bp protein_coding processed_transcript MGP_BALBcJ_T0058002.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142911914 142916276 + Csrp2bp protein_coding retained_intron MGP_BALBcJ_T0058003.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142911928 142916257 + Csrp2bp protein_coding processed_transcript MGP_BALBcJ_T0058004.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142925483 142930747 + Csrp2bp protein_coding retained_intron MGP_BALBcJ_T0058005.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142925683 142927490 + MGP_BALBcJ_P0058005 Csrp2bp protein_coding protein_coding MGP_BALBcJ_T0058006.1 MGP_BALBcJ_G0026560.1 mouse_genomes_project 2 142927214 142930748 + MGP_BALBcJ_P0058006 Csrp2bp protein_coding protein_coding MGP_BALBcJ_T0058752.1 MGP_BALBcJ_G0026742.1 mouse_genomes_project 2 155548875 155555293 + MGP_BALBcJ_P0058752 Myl9 protein_coding protein_coding MGP_BALBcJ_T0058753.1 MGP_BALBcJ_G0026742.1 mouse_genomes_project 2 155548909 155554996 + Myl9 protein_coding processed_transcript MGP_BALBcJ_T0058754.1 MGP_BALBcJ_G0026742.1 mouse_genomes_project 2 155548912 155554169 + Myl9 protein_coding processed_transcript MGP_BALBcJ_T0058755.1 MGP_BALBcJ_G0026742.1 mouse_genomes_project 2 155552151 155554799 + Myl9 protein_coding processed_transcript MGP_BALBcJ_T0013402.1 MGP_BALBcJ_G0011499.1 mouse_genomes_project 2 8099943 8100877 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058222.1 MGP_BALBcJ_G0026619.1 mouse_genomes_project 2 150294238 150299537 + MGP_BALBcJ_P0058222 Tmem74b protein_coding protein_coding MGP_BALBcJ_T0058223.1 MGP_BALBcJ_G0026619.1 mouse_genomes_project 2 150294541 150304354 + MGP_BALBcJ_P0058223 Tmem74b protein_coding protein_coding MGP_BALBcJ_T0058405.1 MGP_BALBcJ_G0026679.1 mouse_genomes_project 2 152596669 152601313 + Bpifb4 protein_coding retained_intron MGP_BALBcJ_T0058406.1 MGP_BALBcJ_G0026679.1 mouse_genomes_project 2 152596678 152623502 + MGP_BALBcJ_P0058406 Bpifb4 protein_coding protein_coding MGP_BALBcJ_T0058407.1 MGP_BALBcJ_G0026679.1 mouse_genomes_project 2 152599573 152622530 + MGP_BALBcJ_P0058407 Bpifb4 protein_coding protein_coding MGP_BALBcJ_T0058408.1 MGP_BALBcJ_G0026679.1 mouse_genomes_project 2 152600979 152603548 + Bpifb4 protein_coding retained_intron MGP_BALBcJ_T0058409.1 MGP_BALBcJ_G0026679.1 mouse_genomes_project 2 152602633 152622530 + MGP_BALBcJ_P0058409 Bpifb4 protein_coding protein_coding MGP_BALBcJ_T0059309.1 MGP_BALBcJ_G0026877.1 mouse_genomes_project 2 165743407 165745265 + MGP_BALBcJ_P0059309 protein_coding protein_coding MGP_BALBcJ_T0059310.1 MGP_BALBcJ_G0026877.1 mouse_genomes_project 2 165744643 165750595 + MGP_BALBcJ_P0059310 protein_coding protein_coding MGP_BALBcJ_T0059312.1 MGP_BALBcJ_G0026877.1 mouse_genomes_project 2 165744875 165746794 + protein_coding processed_transcript MGP_BALBcJ_T0058232.1 MGP_BALBcJ_G0026623.1 mouse_genomes_project 2 150560791 150571613 - MGP_BALBcJ_P0058232 Fam110a protein_coding protein_coding MGP_BALBcJ_T0058233.1 MGP_BALBcJ_G0026623.1 mouse_genomes_project 2 150560791 150565329 - MGP_BALBcJ_P0058233 Fam110a protein_coding protein_coding MGP_BALBcJ_T0058234.1 MGP_BALBcJ_G0026623.1 mouse_genomes_project 2 150560791 150565360 - MGP_BALBcJ_P0058234 Fam110a protein_coding protein_coding MGP_BALBcJ_T0058235.1 MGP_BALBcJ_G0026623.1 mouse_genomes_project 2 150561130 150564788 - MGP_BALBcJ_P0058235 Fam110a protein_coding protein_coding MGP_BALBcJ_T0058098.1 MGP_BALBcJ_G0026581.1 mouse_genomes_project 2 146591502 146594575 - MGP_BALBcJ_P0058098 Foxa2 protein_coding protein_coding MGP_BALBcJ_T0058099.1 MGP_BALBcJ_G0026581.1 mouse_genomes_project 2 146591502 146595596 - MGP_BALBcJ_P0058099 Foxa2 protein_coding protein_coding MGP_BALBcJ_T0058100.1 MGP_BALBcJ_G0026581.1 mouse_genomes_project 2 146592167 146595523 - MGP_BALBcJ_P0058100 Foxa2 protein_coding protein_coding MGP_BALBcJ_T0058101.1 MGP_BALBcJ_G0026581.1 mouse_genomes_project 2 146592865 146594091 - Foxa2 protein_coding processed_transcript MGP_BALBcJ_T0054583.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 37903149 37923155 - Lrp1b protein_coding processed_transcript MGP_BALBcJ_T0054584.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 37903151 39985544 - MGP_BALBcJ_P0054584 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054585.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 37903437 38014894 - MGP_BALBcJ_P0054585 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054586.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 37903437 37935282 - MGP_BALBcJ_P0054586 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054587.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 37908187 37967771 - MGP_BALBcJ_P0054587 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054588.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 37989612 38011870 - Lrp1b protein_coding retained_intron MGP_BALBcJ_T0054589.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 38113833 39114582 - MGP_BALBcJ_P0054589 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054590.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 38599632 39984977 - MGP_BALBcJ_P0054590 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054591.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 38823870 39984993 - Lrp1b protein_coding retained_intron MGP_BALBcJ_T0054592.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 39396458 39984846 - MGP_BALBcJ_P0054592 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0054593.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 39652233 39985176 - Lrp1b protein_coding retained_intron MGP_BALBcJ_T0054594.1 MGP_BALBcJ_G0025685.1 mouse_genomes_project 2 39981797 39984935 - MGP_BALBcJ_P0054594 Lrp1b protein_coding protein_coding MGP_BALBcJ_T0013534.1 MGP_BALBcJ_G0011631.1 mouse_genomes_project 2 55070848 55071025 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007167.1 MGP_BALBcJ_G0005873.1 mouse_genomes_project 2 35700460 35732463 + Gm13589 lincRNA lincRNA MGP_BALBcJ_T0013855.1 MGP_BALBcJ_G0011952.1 mouse_genomes_project 2 171178630 171179245 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017835.1 MGP_BALBcJ_G0015410.1 mouse_genomes_project 2 128937906 128958417 - 4930473A02Rik processed_transcript processed_transcript MGP_BALBcJ_T0013764.1 MGP_BALBcJ_G0011861.1 mouse_genomes_project 2 141869399 141869549 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057889.1 MGP_BALBcJ_G0026532.1 mouse_genomes_project 2 134518069 134525340 + MGP_BALBcJ_P0057889 Lamp5 protein_coding protein_coding MGP_BALBcJ_T0057890.1 MGP_BALBcJ_G0026532.1 mouse_genomes_project 2 134523735 134536457 + MGP_BALBcJ_P0057890 Lamp5 protein_coding protein_coding MGP_BALBcJ_T0057891.1 MGP_BALBcJ_G0026532.1 mouse_genomes_project 2 134524060 134527303 + Lamp5 protein_coding retained_intron MGP_BALBcJ_T0057892.1 MGP_BALBcJ_G0026532.1 mouse_genomes_project 2 134524060 134525022 + Lamp5 protein_coding processed_transcript MGP_BALBcJ_T0057893.1 MGP_BALBcJ_G0026532.1 mouse_genomes_project 2 134525239 134536445 + Lamp5 protein_coding processed_transcript MGP_BALBcJ_T0055313.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71390247 71467113 - MGP_BALBcJ_P0055313 Atf2 protein_coding protein_coding MGP_BALBcJ_T0055314.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71390258 71467102 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0055315.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71392560 71437238 - MGP_BALBcJ_P0055315 Atf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055316.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71392660 71437216 - MGP_BALBcJ_P0055316 Atf2 protein_coding protein_coding MGP_BALBcJ_T0055317.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71400039 71467087 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0055318.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71403481 71467004 - MGP_BALBcJ_P0055318 Atf2 protein_coding protein_coding MGP_BALBcJ_T0055319.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71418690 71467102 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0055320.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71419260 71467067 - MGP_BALBcJ_P0055320 Atf2 protein_coding protein_coding MGP_BALBcJ_T0055321.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71419261 71467027 - MGP_BALBcJ_P0055321 Atf2 protein_coding protein_coding MGP_BALBcJ_T0055322.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71419555 71424426 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0055323.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71436875 71467068 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0055324.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71436968 71467102 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0055325.1 MGP_BALBcJ_G0025813.1 mouse_genomes_project 2 71447761 71467024 - Atf2 protein_coding processed_transcript MGP_BALBcJ_T0058884.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230136 157319174 + MGP_BALBcJ_P0058884 Ralgapb protein_coding protein_coding MGP_BALBcJ_T0058885.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230141 157319174 + MGP_BALBcJ_P0058885 Ralgapb protein_coding protein_coding MGP_BALBcJ_T0058886.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230164 157248405 + Ralgapb protein_coding retained_intron MGP_BALBcJ_T0058887.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230167 157260002 + Ralgapb protein_coding retained_intron MGP_BALBcJ_T0058888.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230170 157263651 + Ralgapb protein_coding processed_transcript MGP_BALBcJ_T0058889.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230239 157317581 + MGP_BALBcJ_P0058889 Ralgapb protein_coding protein_coding MGP_BALBcJ_T0058890.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157230390 157241249 + MGP_BALBcJ_P0058890 Ralgapb protein_coding protein_coding MGP_BALBcJ_T0058891.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157256909 157319174 + MGP_BALBcJ_P0058891 Ralgapb protein_coding protein_coding MGP_BALBcJ_T0058892.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157286188 157293815 + Ralgapb protein_coding retained_intron MGP_BALBcJ_T0058893.1 MGP_BALBcJ_G0026769.1 mouse_genomes_project 2 157298120 157305560 + Ralgapb protein_coding processed_transcript MGP_BALBcJ_T0007293.1 MGP_BALBcJ_G0005976.1 mouse_genomes_project 2 117639710 117646618 + 1700020I14Rik lincRNA lincRNA MGP_BALBcJ_T0007294.1 MGP_BALBcJ_G0005976.1 mouse_genomes_project 2 117639716 117653388 + 1700020I14Rik lincRNA lincRNA MGP_BALBcJ_T0059069.1 MGP_BALBcJ_G0026817.1 mouse_genomes_project 2 163099987 163102525 - MGP_BALBcJ_P0059069 Svs2 protein_coding protein_coding MGP_BALBcJ_T0059070.1 MGP_BALBcJ_G0026817.1 mouse_genomes_project 2 163100586 163102323 - MGP_BALBcJ_P0059070 Svs2 protein_coding protein_coding MGP_BALBcJ_T0017806.1 MGP_BALBcJ_G0015398.1 mouse_genomes_project 2 116277340 116303391 - Gm29232 processed_transcript processed_transcript MGP_BALBcJ_T0055787.1 MGP_BALBcJ_G0025992.1 mouse_genomes_project 2 85369599 85373350 - MGP_BALBcJ_P0055787 protein_coding protein_coding MGP_BALBcJ_T0055788.1 MGP_BALBcJ_G0025992.1 mouse_genomes_project 2 85370077 85373350 - protein_coding processed_transcript MGP_BALBcJ_T0058520.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154141465 154192083 - MGP_BALBcJ_P0058520 Ncoa6 protein_coding protein_coding MGP_BALBcJ_T0058521.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154141474 154226186 - MGP_BALBcJ_P0058521 Ncoa6 protein_coding protein_coding MGP_BALBcJ_T0058522.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154141478 154147652 - Ncoa6 protein_coding retained_intron MGP_BALBcJ_T0058523.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154141478 154154766 - Ncoa6 protein_coding retained_intron MGP_BALBcJ_T0058524.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154158039 154226568 - MGP_BALBcJ_P0058524 Ncoa6 protein_coding protein_coding MGP_BALBcJ_T0058525.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154166728 154170245 - Ncoa6 protein_coding processed_transcript MGP_BALBcJ_T0058526.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154171617 154192085 - MGP_BALBcJ_P0058526 Ncoa6 protein_coding protein_coding MGP_BALBcJ_T0058527.1 MGP_BALBcJ_G0026709.1 mouse_genomes_project 2 154189313 154226204 - Ncoa6 protein_coding processed_transcript MGP_BALBcJ_T0004076.1 MGP_BALBcJ_G0003613.1 mouse_genomes_project 2 130704196 130712642 + AV099323 antisense antisense MGP_BALBcJ_T0017810.1 MGP_BALBcJ_G0015400.1 mouse_genomes_project 2 118299442 118300120 - Gm13997 processed_transcript processed_transcript MGP_BALBcJ_T0102432.1 MGP_BALBcJ_G0040248.1 mouse_genomes_project 2 88203010 88205979 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007375.1 MGP_BALBcJ_G0006044.1 mouse_genomes_project 2 166750084 166755187 + Gm14321 lincRNA lincRNA MGP_BALBcJ_T0007376.1 MGP_BALBcJ_G0006044.1 mouse_genomes_project 2 166750153 166754744 + Gm14321 lincRNA lincRNA MGP_BALBcJ_T0017739.1 MGP_BALBcJ_G0015359.1 mouse_genomes_project 2 54616838 54623585 + 4930555B11Rik processed_transcript processed_transcript MGP_BALBcJ_T0059711.1 MGP_BALBcJ_G0026977.1 mouse_genomes_project 2 180032294 180049918 + MGP_BALBcJ_P0059711 Slc17a9 protein_coding protein_coding MGP_BALBcJ_T0059712.1 MGP_BALBcJ_G0026977.1 mouse_genomes_project 2 180032410 180041451 + Slc17a9 protein_coding retained_intron MGP_BALBcJ_T0059713.1 MGP_BALBcJ_G0026977.1 mouse_genomes_project 2 180032431 180044750 + Slc17a9 protein_coding processed_transcript MGP_BALBcJ_T0059714.1 MGP_BALBcJ_G0026977.1 mouse_genomes_project 2 180044055 180048976 + Slc17a9 protein_coding processed_transcript MGP_BALBcJ_T0059715.1 MGP_BALBcJ_G0026977.1 mouse_genomes_project 2 180045911 180049054 + Slc17a9 protein_coding retained_intron MGP_BALBcJ_T0098358.1 MGP_BALBcJ_G0036412.1 mouse_genomes_project 2 19906914 19907330 - pseudogene pseudogene MGP_BALBcJ_T0013488.1 MGP_BALBcJ_G0011585.1 mouse_genomes_project 2 36893937 36895034 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058410.1 MGP_BALBcJ_G0026680.1 mouse_genomes_project 2 152636127 152661673 + MGP_BALBcJ_P0058410 Bpifa6 protein_coding protein_coding MGP_BALBcJ_T0058785.1 MGP_BALBcJ_G0026750.1 mouse_genomes_project 2 155871501 155880928 + MGP_BALBcJ_P0058785 Tldc2 protein_coding protein_coding MGP_BALBcJ_T0058786.1 MGP_BALBcJ_G0026750.1 mouse_genomes_project 2 155872899 155880929 + MGP_BALBcJ_P0058786 Tldc2 protein_coding protein_coding MGP_BALBcJ_T0055754.1 MGP_BALBcJ_G0025967.1 mouse_genomes_project 2 84737861 84738800 - MGP_BALBcJ_P0055754 Olfr1109 protein_coding protein_coding MGP_BALBcJ_T0057855.1 MGP_BALBcJ_G0026526.1 mouse_genomes_project 2 131366998 131407303 - Fermt1 protein_coding retained_intron MGP_BALBcJ_T0057856.1 MGP_BALBcJ_G0026526.1 mouse_genomes_project 2 131366998 131407580 - MGP_BALBcJ_P0057856 Fermt1 protein_coding protein_coding MGP_BALBcJ_T0057857.1 MGP_BALBcJ_G0026526.1 mouse_genomes_project 2 131397789 131403774 - Fermt1 protein_coding processed_transcript MGP_BALBcJ_T0057858.1 MGP_BALBcJ_G0026526.1 mouse_genomes_project 2 131400772 131403640 - Fermt1 protein_coding processed_transcript MGP_BALBcJ_T0010416.1 MGP_BALBcJ_G0008541.1 mouse_genomes_project 2 90415143 90415215 + Mir7221 miRNA miRNA MGP_BALBcJ_T0055819.1 MGP_BALBcJ_G0026021.1 mouse_genomes_project 2 86162634 86163606 + MGP_BALBcJ_P0055819 Olfr1178 protein_coding protein_coding MGP_BALBcJ_T0058281.1 MGP_BALBcJ_G0026646.1 mouse_genomes_project 2 151206451 151214835 + MGP_BALBcJ_P0058281 Defb36 protein_coding protein_coding MGP_BALBcJ_T0056323.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99617342 99744514 - MGP_BALBcJ_P0056323 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056324.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99617342 99701344 - MGP_BALBcJ_P0056324 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056325.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99619297 99701345 - MGP_BALBcJ_P0056325 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056326.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99620305 99701287 - MGP_BALBcJ_P0056326 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056327.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99644562 99744514 - MGP_BALBcJ_P0056327 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056328.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99662252 99788638 - MGP_BALBcJ_P0056328 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056329.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99675876 99701691 - MGP_BALBcJ_P0056329 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056330.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99675920 99719039 - MGP_BALBcJ_P0056330 Prr5l protein_coding protein_coding MGP_BALBcJ_T0056331.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99676031 99701370 - Prr5l protein_coding processed_transcript MGP_BALBcJ_T0056332.1 MGP_BALBcJ_G0026162.1 mouse_genomes_project 2 99737334 99788651 - Prr5l protein_coding processed_transcript MGP_BALBcJ_T0052301.1 MGP_BALBcJ_G0025285.1 mouse_genomes_project 2 549904 723105 + MGP_BALBcJ_P0052301 Fam107b protein_coding protein_coding MGP_BALBcJ_T0052302.1 MGP_BALBcJ_G0025285.1 mouse_genomes_project 2 652135 725460 + MGP_BALBcJ_P0052302 Fam107b protein_coding protein_coding MGP_BALBcJ_T0052303.1 MGP_BALBcJ_G0025285.1 mouse_genomes_project 2 652155 723239 + MGP_BALBcJ_P0052303 Fam107b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052304.1 MGP_BALBcJ_G0025285.1 mouse_genomes_project 2 708945 711209 + MGP_BALBcJ_P0052304 Fam107b protein_coding protein_coding MGP_BALBcJ_T0052305.1 MGP_BALBcJ_G0025285.1 mouse_genomes_project 2 708971 725458 + MGP_BALBcJ_P0052305 Fam107b protein_coding protein_coding MGP_BALBcJ_T0052306.1 MGP_BALBcJ_G0025285.1 mouse_genomes_project 2 712183 722943 + MGP_BALBcJ_P0052306 Fam107b protein_coding protein_coding MGP_BALBcJ_T0055705.1 MGP_BALBcJ_G0025919.1 mouse_genomes_project 2 83467463 83468387 + MGP_BALBcJ_P0055705 Olfr1026 protein_coding protein_coding MGP_BALBcJ_T0057794.1 MGP_BALBcJ_G0026513.1 mouse_genomes_project 2 130417126 130457889 - MGP_BALBcJ_P0057794 Rassf2 protein_coding protein_coding MGP_BALBcJ_T0057795.1 MGP_BALBcJ_G0026513.1 mouse_genomes_project 2 130420563 130458090 - MGP_BALBcJ_P0057795 Rassf2 protein_coding protein_coding MGP_BALBcJ_T0057796.1 MGP_BALBcJ_G0026513.1 mouse_genomes_project 2 130428826 130449068 - Rassf2 protein_coding retained_intron MGP_BALBcJ_T0057797.1 MGP_BALBcJ_G0026513.1 mouse_genomes_project 2 130430818 130458146 - MGP_BALBcJ_P0057797 Rassf2 protein_coding protein_coding MGP_BALBcJ_T0057798.1 MGP_BALBcJ_G0026513.1 mouse_genomes_project 2 130437626 130457054 - MGP_BALBcJ_P0057798 Rassf2 protein_coding protein_coding MGP_BALBcJ_T0056735.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115295198 115359364 - MGP_BALBcJ_P0056735 Rasgrp1 protein_coding protein_coding MGP_BALBcJ_T0056736.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115295199 115359240 - MGP_BALBcJ_P0056736 Rasgrp1 protein_coding protein_coding MGP_BALBcJ_T0056737.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115297745 115359072 - MGP_BALBcJ_P0056737 Rasgrp1 protein_coding protein_coding MGP_BALBcJ_T0056738.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115297745 115359072 - MGP_BALBcJ_P0056738 Rasgrp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056739.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115297745 115359072 - MGP_BALBcJ_P0056739 Rasgrp1 protein_coding protein_coding MGP_BALBcJ_T0056740.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115297745 115359072 - MGP_BALBcJ_P0056740 Rasgrp1 protein_coding protein_coding MGP_BALBcJ_T0056741.1 MGP_BALBcJ_G0026284.1 mouse_genomes_project 2 115313422 115359288 - Rasgrp1 protein_coding retained_intron MGP_BALBcJ_T0052728.1 MGP_BALBcJ_G0025352.1 mouse_genomes_project 2 16079280 16080790 + MGP_BALBcJ_P0052728 4930426L09Rik protein_coding protein_coding MGP_BALBcJ_T0053686.1 MGP_BALBcJ_G0025524.1 mouse_genomes_project 2 27263835 27278485 + MGP_BALBcJ_P0053686 Set protein_coding protein_coding MGP_BALBcJ_T0053687.1 MGP_BALBcJ_G0025524.1 mouse_genomes_project 2 27269941 27277739 + MGP_BALBcJ_P0053687 Set protein_coding protein_coding MGP_BALBcJ_T0053688.1 MGP_BALBcJ_G0025524.1 mouse_genomes_project 2 27270788 27279196 + Set protein_coding processed_transcript MGP_BALBcJ_T0053689.1 MGP_BALBcJ_G0025524.1 mouse_genomes_project 2 27275002 27279124 + MGP_BALBcJ_P0053689 Set protein_coding unknown_likely_coding MGP_BALBcJ_T0053690.1 MGP_BALBcJ_G0025524.1 mouse_genomes_project 2 27275374 27277812 + Set protein_coding processed_transcript MGP_BALBcJ_T0010436.1 MGP_BALBcJ_G0008561.1 mouse_genomes_project 2 120837921 120838000 + Mir147 miRNA miRNA MGP_BALBcJ_T0059865.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900300 180901539 - MGP_BALBcJ_P0059865 Uckl1 protein_coding protein_coding MGP_BALBcJ_T0059866.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900303 180900949 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059867.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900314 180913713 - MGP_BALBcJ_P0059867 Uckl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059868.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900316 180901033 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059869.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900382 180903692 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059870.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900462 180913709 - MGP_BALBcJ_P0059870 Uckl1 protein_coding protein_coding MGP_BALBcJ_T0059871.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900765 180904279 - MGP_BALBcJ_P0059871 Uckl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059872.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900804 180904279 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059873.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180900915 180902527 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059874.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180901001 180904288 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059875.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180901157 180905628 - Uckl1 protein_coding processed_transcript MGP_BALBcJ_T0059876.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180901512 180903310 - Uckl1 protein_coding processed_transcript MGP_BALBcJ_T0059877.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180903476 180905652 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059878.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180904404 180916633 - MGP_BALBcJ_P0059878 Uckl1 protein_coding protein_coding MGP_BALBcJ_T0059879.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180904449 180905986 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0059880.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180904460 180910102 - MGP_BALBcJ_P0059880 Uckl1 protein_coding protein_coding MGP_BALBcJ_T0059881.1 MGP_BALBcJ_G0027002.1 mouse_genomes_project 2 180905436 180913719 - Uckl1 protein_coding retained_intron MGP_BALBcJ_T0055401.1 MGP_BALBcJ_G0025840.1 mouse_genomes_project 2 74244921 74254931 - MGP_BALBcJ_P0055401 Fkbp7 protein_coding protein_coding MGP_BALBcJ_T0055402.1 MGP_BALBcJ_G0025840.1 mouse_genomes_project 2 74244940 74247121 - Fkbp7 protein_coding processed_transcript MGP_BALBcJ_T0055403.1 MGP_BALBcJ_G0025840.1 mouse_genomes_project 2 74247584 74254977 - MGP_BALBcJ_P0055403 Fkbp7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055404.1 MGP_BALBcJ_G0025840.1 mouse_genomes_project 2 74253222 74254946 - Fkbp7 protein_coding retained_intron MGP_BALBcJ_T0100966.1 MGP_BALBcJ_G0039002.1 mouse_genomes_project 2 95118032 95118161 - Gm23317 snoRNA snoRNA MGP_BALBcJ_T0099681.1 MGP_BALBcJ_G0037717.1 mouse_genomes_project 2 73265107 73265206 - Gm24996 snRNA snRNA MGP_BALBcJ_T0053254.1 MGP_BALBcJ_G0025451.1 mouse_genomes_project 2 23328859 23336937 - MGP_BALBcJ_P0053254 Lhx3 protein_coding protein_coding MGP_BALBcJ_T0053255.1 MGP_BALBcJ_G0025451.1 mouse_genomes_project 2 23328863 23331514 - Lhx3 protein_coding retained_intron MGP_BALBcJ_T0053256.1 MGP_BALBcJ_G0025451.1 mouse_genomes_project 2 23328863 23335223 - MGP_BALBcJ_P0053256 Lhx3 protein_coding protein_coding MGP_BALBcJ_T0053257.1 MGP_BALBcJ_G0025451.1 mouse_genomes_project 2 23331123 23332089 - Lhx3 protein_coding retained_intron MGP_BALBcJ_T0013487.1 MGP_BALBcJ_G0011584.1 mouse_genomes_project 2 36874234 36874826 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001077.1 MGP_BALBcJ_G0001005.1 mouse_genomes_project 2 66354538 66357767 + TEC TEC MGP_BALBcJ_T0099677.1 MGP_BALBcJ_G0037713.1 mouse_genomes_project 2 60873581 60873688 - Gm23503 snRNA snRNA MGP_BALBcJ_T0004126.1 MGP_BALBcJ_G0003652.1 mouse_genomes_project 2 157014101 157017843 + 1700060C20Rik antisense antisense MGP_BALBcJ_T0007220.1 MGP_BALBcJ_G0005918.1 mouse_genomes_project 2 73010154 73018277 + Gm13658 lincRNA lincRNA MGP_BALBcJ_T0007177.1 MGP_BALBcJ_G0005882.1 mouse_genomes_project 2 48001473 48005818 + Gm13485 lincRNA lincRNA MGP_BALBcJ_T0001089.1 MGP_BALBcJ_G0001017.1 mouse_genomes_project 2 125523245 125523851 - TEC TEC MGP_BALBcJ_T0001090.1 MGP_BALBcJ_G0001017.1 mouse_genomes_project 2 125523505 125523829 - TEC TEC MGP_BALBcJ_T0013682.1 MGP_BALBcJ_G0011779.1 mouse_genomes_project 2 106385282 106385910 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007413.1 MGP_BALBcJ_G0006078.1 mouse_genomes_project 2 180207283 180208399 + Gm27032 lincRNA lincRNA MGP_BALBcJ_T0054452.1 MGP_BALBcJ_G0025648.1 mouse_genomes_project 2 34074739 34075678 + MGP_BALBcJ_P0054452 Olfr50 protein_coding protein_coding MGP_BALBcJ_T0098568.1 MGP_BALBcJ_G0036622.1 mouse_genomes_project 2 59220664 59220781 + Gm25966 rRNA rRNA MGP_BALBcJ_T0100976.1 MGP_BALBcJ_G0039012.1 mouse_genomes_project 2 127045354 127045477 + Gm23172 snoRNA snoRNA MGP_BALBcJ_T0059676.1 MGP_BALBcJ_G0026969.1 mouse_genomes_project 2 179760718 179779393 + MGP_BALBcJ_P0059676 Slco4a1 protein_coding protein_coding MGP_BALBcJ_T0059677.1 MGP_BALBcJ_G0026969.1 mouse_genomes_project 2 179760807 179779371 + Slco4a1 protein_coding processed_transcript MGP_BALBcJ_T0059678.1 MGP_BALBcJ_G0026969.1 mouse_genomes_project 2 179765467 179779393 + MGP_BALBcJ_P0059678 Slco4a1 protein_coding protein_coding MGP_BALBcJ_T0059679.1 MGP_BALBcJ_G0026969.1 mouse_genomes_project 2 179771573 179772896 + Slco4a1 protein_coding retained_intron MGP_BALBcJ_T0059680.1 MGP_BALBcJ_G0026969.1 mouse_genomes_project 2 179776952 179779378 + Slco4a1 protein_coding retained_intron MGP_BALBcJ_T0055806.1 MGP_BALBcJ_G0026009.1 mouse_genomes_project 2 85677939 85678878 - MGP_BALBcJ_P0055806 Olfr1157 protein_coding protein_coding MGP_BALBcJ_T0056268.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91690334 91704112 - MGP_BALBcJ_P0056268 Accsl protein_coding protein_coding MGP_BALBcJ_T0056269.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91690335 91691995 - MGP_BALBcJ_P0056269 Accsl protein_coding protein_coding MGP_BALBcJ_T0056270.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91690340 91691707 - Accsl protein_coding processed_transcript MGP_BALBcJ_T0056271.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91696018 91699765 - Accsl protein_coding processed_transcript MGP_BALBcJ_T0056272.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91696732 91704112 - Accsl protein_coding processed_transcript MGP_BALBcJ_T0056273.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91700823 91704027 - MGP_BALBcJ_P0056273 Accsl protein_coding protein_coding MGP_BALBcJ_T0056274.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91700823 91704037 - MGP_BALBcJ_P0056274 Accsl protein_coding protein_coding MGP_BALBcJ_T0056275.1 MGP_BALBcJ_G0026150.1 mouse_genomes_project 2 91700975 91703648 - Accsl protein_coding processed_transcript MGP_BALBcJ_T0102424.1 MGP_BALBcJ_G0040240.1 mouse_genomes_project 2 86292737 86293649 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0057762.1 MGP_BALBcJ_G0026506.1 mouse_genomes_project 2 129733605 129788329 - MGP_BALBcJ_P0057762 Rnf24 protein_coding protein_coding MGP_BALBcJ_T0057763.1 MGP_BALBcJ_G0026506.1 mouse_genomes_project 2 129733606 129748422 - MGP_BALBcJ_P0057763 Rnf24 protein_coding protein_coding MGP_BALBcJ_T0057764.1 MGP_BALBcJ_G0026506.1 mouse_genomes_project 2 129733608 129764031 - MGP_BALBcJ_P0057764 Rnf24 protein_coding protein_coding MGP_BALBcJ_T0057765.1 MGP_BALBcJ_G0026506.1 mouse_genomes_project 2 129738187 129788310 - MGP_BALBcJ_P0057765 Rnf24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057766.1 MGP_BALBcJ_G0026506.1 mouse_genomes_project 2 129747664 129788340 - Rnf24 protein_coding retained_intron MGP_BALBcJ_T0052349.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1955657 1977595 - MGP_BALBcJ_P0052349 Mcm10 protein_coding protein_coding MGP_BALBcJ_T0052350.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1956667 1961755 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0052351.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1956667 1967417 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0052352.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1956667 1978042 - MGP_BALBcJ_P0052352 Mcm10 protein_coding protein_coding MGP_BALBcJ_T0052353.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1956974 1959110 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0052354.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1957203 1960699 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0052355.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1964879 1970958 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0052356.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1969900 1971178 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0052357.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1972369 1978004 - Mcm10 protein_coding processed_transcript MGP_BALBcJ_T0052358.1 MGP_BALBcJ_G0025292.1 mouse_genomes_project 2 1972854 1977966 - Mcm10 protein_coding retained_intron MGP_BALBcJ_T0102423.1 MGP_BALBcJ_G0040239.1 mouse_genomes_project 2 86121778 86122714 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058127.1 MGP_BALBcJ_G0026596.1 mouse_genomes_project 2 147424443 147428298 - MGP_BALBcJ_P0058127 Cst3 protein_coding protein_coding MGP_BALBcJ_T0058128.1 MGP_BALBcJ_G0026596.1 mouse_genomes_project 2 147425190 147428173 - Cst3 protein_coding processed_transcript MGP_BALBcJ_T0058129.1 MGP_BALBcJ_G0026596.1 mouse_genomes_project 2 147425566 147428414 - MGP_BALBcJ_P0058129 Cst3 protein_coding protein_coding MGP_BALBcJ_T0055958.1 MGP_BALBcJ_G0026105.1 mouse_genomes_project 2 88663442 88673719 - MGP_BALBcJ_P0055958 Ndufs3 protein_coding protein_coding MGP_BALBcJ_T0055959.1 MGP_BALBcJ_G0026105.1 mouse_genomes_project 2 88666980 88673534 - Ndufs3 protein_coding processed_transcript MGP_BALBcJ_T0055960.1 MGP_BALBcJ_G0026105.1 mouse_genomes_project 2 88672714 88673594 - Ndufs3 protein_coding processed_transcript MGP_BALBcJ_T0054607.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41897900 42195996 - MGP_BALBcJ_P0054607 Gtdc1 protein_coding protein_coding MGP_BALBcJ_T0054608.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41897903 42090509 - MGP_BALBcJ_P0054608 Gtdc1 protein_coding protein_coding MGP_BALBcJ_T0054609.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41898621 41904836 - Gtdc1 protein_coding processed_transcript MGP_BALBcJ_T0054610.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41903858 41905203 - Gtdc1 protein_coding processed_transcript MGP_BALBcJ_T0054611.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41908966 42267287 - MGP_BALBcJ_P0054611 Gtdc1 protein_coding protein_coding MGP_BALBcJ_T0054612.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41963460 42267390 - Gtdc1 protein_coding processed_transcript MGP_BALBcJ_T0054613.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 41965595 42267783 - MGP_BALBcJ_P0054613 Gtdc1 protein_coding protein_coding MGP_BALBcJ_T0054614.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 42085966 42160405 - Gtdc1 protein_coding processed_transcript MGP_BALBcJ_T0054615.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 42122053 42267362 - MGP_BALBcJ_P0054615 Gtdc1 protein_coding protein_coding MGP_BALBcJ_T0054616.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 42125712 42267360 - Gtdc1 protein_coding processed_transcript MGP_BALBcJ_T0054617.1 MGP_BALBcJ_G0025688.1 mouse_genomes_project 2 42128177 42267275 - Gtdc1 protein_coding processed_transcript MGP_BALBcJ_T0013472.1 MGP_BALBcJ_G0011569.1 mouse_genomes_project 2 34203983 34204479 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100995.1 MGP_BALBcJ_G0039031.1 mouse_genomes_project 2 149934816 149934952 - Gm23261 snoRNA snoRNA MGP_BALBcJ_T0055888.1 MGP_BALBcJ_G0026078.1 mouse_genomes_project 2 87453815 87454879 - MGP_BALBcJ_P0055888 protein_coding protein_coding MGP_BALBcJ_T0098577.1 MGP_BALBcJ_G0036631.1 mouse_genomes_project 2 117678945 117679064 + n-R5s204 rRNA rRNA MGP_BALBcJ_T0007337.1 MGP_BALBcJ_G0006012.1 mouse_genomes_project 2 150422419 150425461 + Gm14155 lincRNA lincRNA MGP_BALBcJ_T0055742.1 MGP_BALBcJ_G0025955.1 mouse_genomes_project 2 84441414 84442391 - MGP_BALBcJ_P0055742 protein_coding protein_coding MGP_BALBcJ_T0100975.1 MGP_BALBcJ_G0039011.1 mouse_genomes_project 2 125933744 125933802 + Gm22889 snoRNA snoRNA MGP_BALBcJ_T0001049.1 MGP_BALBcJ_G0000977.1 mouse_genomes_project 2 12601517 12603257 + TEC TEC MGP_BALBcJ_T0056942.1 MGP_BALBcJ_G0026332.1 mouse_genomes_project 2 118090982 118099521 + protein_coding retained_intron MGP_BALBcJ_T0056943.1 MGP_BALBcJ_G0026332.1 mouse_genomes_project 2 118090998 118100582 + protein_coding retained_intron MGP_BALBcJ_T0056944.1 MGP_BALBcJ_G0026332.1 mouse_genomes_project 2 118090998 118099520 + MGP_BALBcJ_P0056944 protein_coding protein_coding MGP_BALBcJ_T0056945.1 MGP_BALBcJ_G0026332.1 mouse_genomes_project 2 118092112 118093687 + protein_coding retained_intron MGP_BALBcJ_T0056946.1 MGP_BALBcJ_G0026332.1 mouse_genomes_project 2 118096424 118098004 + protein_coding retained_intron MGP_BALBcJ_T0056947.1 MGP_BALBcJ_G0026332.1 mouse_genomes_project 2 118098525 118099246 + protein_coding retained_intron MGP_BALBcJ_T0013632.1 MGP_BALBcJ_G0011729.1 mouse_genomes_project 2 85583493 85583716 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102435.1 MGP_BALBcJ_G0040251.1 mouse_genomes_project 2 117326255 117326496 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010368.1 MGP_BALBcJ_G0008493.1 mouse_genomes_project 2 23598472 23598533 - Mir6996 miRNA miRNA MGP_BALBcJ_T0003916.1 MGP_BALBcJ_G0003497.1 mouse_genomes_project 2 24181478 24185047 + Gm13398 antisense antisense MGP_BALBcJ_T0053159.1 MGP_BALBcJ_G0025428.1 mouse_genomes_project 2 22672227 22680465 - MGP_BALBcJ_P0053159 Mamdc4 protein_coding protein_coding MGP_BALBcJ_T0053160.1 MGP_BALBcJ_G0025428.1 mouse_genomes_project 2 22672249 22680507 - MGP_BALBcJ_P0053160 Mamdc4 protein_coding protein_coding MGP_BALBcJ_T0053161.1 MGP_BALBcJ_G0025428.1 mouse_genomes_project 2 22672422 22679403 - MGP_BALBcJ_P0053161 Mamdc4 protein_coding protein_coding MGP_BALBcJ_T0053162.1 MGP_BALBcJ_G0025428.1 mouse_genomes_project 2 22677606 22678634 - Mamdc4 protein_coding processed_transcript MGP_BALBcJ_T0053163.1 MGP_BALBcJ_G0025428.1 mouse_genomes_project 2 22677650 22678264 - Mamdc4 protein_coding processed_transcript MGP_BALBcJ_T0053164.1 MGP_BALBcJ_G0025428.1 mouse_genomes_project 2 22679322 22684029 - Mamdc4 protein_coding processed_transcript MGP_BALBcJ_T0053321.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23535638 23572153 - MGP_BALBcJ_P0053321 Sec16a protein_coding protein_coding MGP_BALBcJ_T0053322.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23535638 23556153 - MGP_BALBcJ_P0053322 Sec16a protein_coding protein_coding MGP_BALBcJ_T0053323.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23535640 23572155 - MGP_BALBcJ_P0053323 Sec16a protein_coding protein_coding MGP_BALBcJ_T0053324.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23536496 23539299 - Sec16a protein_coding processed_transcript MGP_BALBcJ_T0053325.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23536926 23542536 - Sec16a protein_coding processed_transcript MGP_BALBcJ_T0053326.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23540684 23546062 - Sec16a protein_coding processed_transcript MGP_BALBcJ_T0053327.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23562704 23566694 - MGP_BALBcJ_P0053327 Sec16a protein_coding protein_coding MGP_BALBcJ_T0053328.1 MGP_BALBcJ_G0025462.1 mouse_genomes_project 2 23568902 23572139 - Sec16a protein_coding processed_transcript MGP_BALBcJ_T0017872.1 MGP_BALBcJ_G0015426.1 mouse_genomes_project 2 158785050 158820383 + 4933416E03Rik processed_transcript processed_transcript MGP_BALBcJ_T0001028.1 MGP_BALBcJ_G0000956.1 mouse_genomes_project 2 9432048 9435108 - TEC TEC MGP_BALBcJ_T0004092.1 MGP_BALBcJ_G0003622.1 mouse_genomes_project 2 141417663 141418271 + Kif16bos antisense antisense MGP_BALBcJ_T0013854.1 MGP_BALBcJ_G0011951.1 mouse_genomes_project 2 170019754 170020500 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055381.1 MGP_BALBcJ_G0025832.1 mouse_genomes_project 2 73517635 73525510 - MGP_BALBcJ_P0055381 Ttc30b protein_coding protein_coding MGP_BALBcJ_T0013624.1 MGP_BALBcJ_G0011721.1 mouse_genomes_project 2 85026521 85026753 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054189.1 MGP_BALBcJ_G0025599.1 mouse_genomes_project 2 30063129 30123847 - MGP_BALBcJ_P0054189 Stxbp1 protein_coding protein_coding MGP_BALBcJ_T0054190.1 MGP_BALBcJ_G0025599.1 mouse_genomes_project 2 30063134 30092718 - Stxbp1 protein_coding processed_transcript MGP_BALBcJ_T0054191.1 MGP_BALBcJ_G0025599.1 mouse_genomes_project 2 30063488 30123804 - MGP_BALBcJ_P0054191 Stxbp1 protein_coding protein_coding MGP_BALBcJ_T0054192.1 MGP_BALBcJ_G0025599.1 mouse_genomes_project 2 30092041 30093124 - Stxbp1 protein_coding retained_intron MGP_BALBcJ_T0010447.1 MGP_BALBcJ_G0008572.1 mouse_genomes_project 2 146601778 146601857 + Gm27420 miRNA miRNA MGP_BALBcJ_T0099710.1 MGP_BALBcJ_G0037746.1 mouse_genomes_project 2 161665053 161665211 - Gm24478 snRNA snRNA MGP_BALBcJ_T0055784.1 MGP_BALBcJ_G0025989.1 mouse_genomes_project 2 85336731 85337655 + MGP_BALBcJ_P0055784 protein_coding protein_coding MGP_BALBcJ_T0056889.1 MGP_BALBcJ_G0026325.1 mouse_genomes_project 2 117801606 117810422 - MGP_BALBcJ_P0056889 Ltk protein_coding protein_coding MGP_BALBcJ_T0056890.1 MGP_BALBcJ_G0026325.1 mouse_genomes_project 2 117801608 117808730 - Ltk protein_coding retained_intron MGP_BALBcJ_T0056891.1 MGP_BALBcJ_G0026325.1 mouse_genomes_project 2 117801608 117810457 - MGP_BALBcJ_P0056891 Ltk protein_coding protein_coding MGP_BALBcJ_T0056892.1 MGP_BALBcJ_G0026325.1 mouse_genomes_project 2 117801612 117810558 - MGP_BALBcJ_P0056892 Ltk protein_coding protein_coding MGP_BALBcJ_T0056893.1 MGP_BALBcJ_G0026325.1 mouse_genomes_project 2 117801614 117808734 - MGP_BALBcJ_P0056893 Ltk protein_coding protein_coding MGP_BALBcJ_T0056894.1 MGP_BALBcJ_G0026325.1 mouse_genomes_project 2 117801616 117808728 - Ltk protein_coding retained_intron MGP_BALBcJ_T0007331.1 MGP_BALBcJ_G0006007.1 mouse_genomes_project 2 147828869 147833727 + Gm14135 lincRNA lincRNA MGP_BALBcJ_T0100935.1 MGP_BALBcJ_G0038971.1 mouse_genomes_project 2 29486591 29486676 + Gm22192 snoRNA snoRNA MGP_BALBcJ_T0010391.1 MGP_BALBcJ_G0008516.1 mouse_genomes_project 2 34969377 34969461 - Mir5128 miRNA miRNA MGP_BALBcJ_T0058605.1 MGP_BALBcJ_G0026724.1 mouse_genomes_project 2 154704121 154708489 - MGP_BALBcJ_P0058605 Gdf5 protein_coding protein_coding MGP_BALBcJ_T0013603.1 MGP_BALBcJ_G0011700.1 mouse_genomes_project 2 79723374 79723969 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056884.1 MGP_BALBcJ_G0026323.1 mouse_genomes_project 2 117724376 117785709 + MGP_BALBcJ_P0056884 Rtf1 protein_coding protein_coding MGP_BALBcJ_T0056885.1 MGP_BALBcJ_G0026323.1 mouse_genomes_project 2 117724405 117741235 + Rtf1 protein_coding processed_transcript MGP_BALBcJ_T0056886.1 MGP_BALBcJ_G0026323.1 mouse_genomes_project 2 117760017 117762019 + Rtf1 protein_coding retained_intron MGP_BALBcJ_T0056887.1 MGP_BALBcJ_G0026323.1 mouse_genomes_project 2 117776997 117777960 + Rtf1 protein_coding retained_intron MGP_BALBcJ_T0013634.1 MGP_BALBcJ_G0011731.1 mouse_genomes_project 2 86365307 86375840 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098364.1 MGP_BALBcJ_G0036418.1 mouse_genomes_project 2 108523938 108524147 - pseudogene pseudogene MGP_BALBcJ_T0007253.1 MGP_BALBcJ_G0005945.1 mouse_genomes_project 2 99777648 99788880 + Gm13905 lincRNA lincRNA MGP_BALBcJ_T0007172.1 MGP_BALBcJ_G0005877.1 mouse_genomes_project 2 43094106 43114185 + Gm13465 lincRNA lincRNA MGP_BALBcJ_T0100999.1 MGP_BALBcJ_G0039035.1 mouse_genomes_project 2 157176412 157176543 - Gm24411 snoRNA snoRNA MGP_BALBcJ_T0054957.1 MGP_BALBcJ_G0025744.1 mouse_genomes_project 2 60089216 60118509 + MGP_BALBcJ_P0054957 Gca protein_coding protein_coding MGP_BALBcJ_T0054958.1 MGP_BALBcJ_G0025744.1 mouse_genomes_project 2 60110574 60114833 + Gca protein_coding processed_transcript MGP_BALBcJ_T0058370.1 MGP_BALBcJ_G0026669.1 mouse_genomes_project 2 152026490 152152565 - MGP_BALBcJ_P0058370 Nol4l protein_coding protein_coding MGP_BALBcJ_T0058371.1 MGP_BALBcJ_G0026669.1 mouse_genomes_project 2 152037331 152065609 - Nol4l protein_coding processed_transcript MGP_BALBcJ_T0058372.1 MGP_BALBcJ_G0026669.1 mouse_genomes_project 2 152079970 152113697 - Nol4l protein_coding processed_transcript MGP_BALBcJ_T0058373.1 MGP_BALBcJ_G0026669.1 mouse_genomes_project 2 152083769 152100547 - Nol4l protein_coding processed_transcript MGP_BALBcJ_T0055692.1 MGP_BALBcJ_G0025907.1 mouse_genomes_project 2 83253918 83254863 + MGP_BALBcJ_P0055692 Olfr1009 protein_coding protein_coding MGP_BALBcJ_T0057626.1 MGP_BALBcJ_G0026476.1 mouse_genomes_project 2 128785283 128792131 - MGP_BALBcJ_P0057626 Cpxm1 protein_coding protein_coding MGP_BALBcJ_T0057627.1 MGP_BALBcJ_G0026476.1 mouse_genomes_project 2 128785284 128787805 - Cpxm1 protein_coding retained_intron MGP_BALBcJ_T0057467.1 MGP_BALBcJ_G0026435.1 mouse_genomes_project 2 125680251 125691132 + MGP_BALBcJ_P0057467 Gpat2 protein_coding protein_coding MGP_BALBcJ_T0013777.1 MGP_BALBcJ_G0011874.1 mouse_genomes_project 2 145425262 145425865 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017874.1 MGP_BALBcJ_G0015428.1 mouse_genomes_project 2 161509816 161515771 + 9430021M05Rik processed_transcript processed_transcript MGP_BALBcJ_T0055731.1 MGP_BALBcJ_G0025945.1 mouse_genomes_project 2 84084875 84085844 - MGP_BALBcJ_P0055731 Olfr228 protein_coding protein_coding MGP_BALBcJ_T0010474.1 MGP_BALBcJ_G0008599.1 mouse_genomes_project 2 179693625 179693702 + Mir1a-1 miRNA miRNA MGP_BALBcJ_T0013450.1 MGP_BALBcJ_G0011547.1 mouse_genomes_project 2 23688197 23688766 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059543.1 MGP_BALBcJ_G0026936.1 mouse_genomes_project 2 172845949 172848634 + MGP_BALBcJ_P0059543 1700010B08Rik protein_coding protein_coding MGP_BALBcJ_T0003909.1 MGP_BALBcJ_G0003494.1 mouse_genomes_project 2 23335349 23337931 + Gm27196 antisense antisense MGP_BALBcJ_T0007254.1 MGP_BALBcJ_G0005946.1 mouse_genomes_project 2 101088743 101093849 + Gm13874 lincRNA lincRNA MGP_BALBcJ_T0007255.1 MGP_BALBcJ_G0005946.1 mouse_genomes_project 2 101089127 101093849 + Gm13874 lincRNA lincRNA MGP_BALBcJ_T0007256.1 MGP_BALBcJ_G0005946.1 mouse_genomes_project 2 101093182 101097645 + Gm13874 lincRNA lincRNA MGP_BALBcJ_T0054251.1 MGP_BALBcJ_G0025608.1 mouse_genomes_project 2 30736080 30748127 - MGP_BALBcJ_P0054251 Zbtb43 protein_coding protein_coding MGP_BALBcJ_T0054252.1 MGP_BALBcJ_G0025608.1 mouse_genomes_project 2 30736080 30754300 - MGP_BALBcJ_P0054252 Zbtb43 protein_coding protein_coding MGP_BALBcJ_T0054253.1 MGP_BALBcJ_G0025608.1 mouse_genomes_project 2 30739315 30754273 - MGP_BALBcJ_P0054253 Zbtb43 protein_coding protein_coding MGP_BALBcJ_T0054254.1 MGP_BALBcJ_G0025608.1 mouse_genomes_project 2 30740412 30750856 - MGP_BALBcJ_P0054254 Zbtb43 protein_coding protein_coding MGP_BALBcJ_T0054255.1 MGP_BALBcJ_G0025608.1 mouse_genomes_project 2 30740681 30754327 - MGP_BALBcJ_P0054255 Zbtb43 protein_coding protein_coding MGP_BALBcJ_T0100944.1 MGP_BALBcJ_G0038980.1 mouse_genomes_project 2 40147143 40147276 + Gm24350 snoRNA snoRNA MGP_BALBcJ_T0003878.1 MGP_BALBcJ_G0003469.1 mouse_genomes_project 2 3412314 3416562 - Gm13388 antisense antisense MGP_BALBcJ_T0055652.1 MGP_BALBcJ_G0025889.1 mouse_genomes_project 2 82503518 82509032 + Prg3 protein_coding processed_transcript MGP_BALBcJ_T0055653.1 MGP_BALBcJ_G0025889.1 mouse_genomes_project 2 82503518 82509131 + MGP_BALBcJ_P0055653 Prg3 protein_coding protein_coding MGP_BALBcJ_T0013540.1 MGP_BALBcJ_G0011637.1 mouse_genomes_project 2 56760476 56760906 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003995.1 MGP_BALBcJ_G0003557.1 mouse_genomes_project 2 70928936 70935903 + Gm13703 antisense antisense MGP_BALBcJ_T0013726.1 MGP_BALBcJ_G0011823.1 mouse_genomes_project 2 126821233 126822214 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013391.1 MGP_BALBcJ_G0011488.1 mouse_genomes_project 2 1916946 1917171 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058399.1 MGP_BALBcJ_G0026676.1 mouse_genomes_project 2 152534042 152553671 + MGP_BALBcJ_P0058399 Bpifb2 protein_coding protein_coding MGP_BALBcJ_T0058400.1 MGP_BALBcJ_G0026676.1 mouse_genomes_project 2 152534072 152535383 + Bpifb2 protein_coding retained_intron MGP_BALBcJ_T0102427.1 MGP_BALBcJ_G0040243.1 mouse_genomes_project 2 87173380 87178917 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058994.1 MGP_BALBcJ_G0026792.1 mouse_genomes_project 2 161909437 161949370 + MGP_BALBcJ_P0058994 Mybl2 protein_coding protein_coding MGP_BALBcJ_T0058995.1 MGP_BALBcJ_G0026792.1 mouse_genomes_project 2 161914091 161920205 + Mybl2 protein_coding processed_transcript MGP_BALBcJ_T0058996.1 MGP_BALBcJ_G0026792.1 mouse_genomes_project 2 161923942 161937532 + Mybl2 protein_coding retained_intron MGP_BALBcJ_T0058997.1 MGP_BALBcJ_G0026792.1 mouse_genomes_project 2 161939133 161947310 + MGP_BALBcJ_P0058997 Mybl2 protein_coding protein_coding MGP_BALBcJ_T0058998.1 MGP_BALBcJ_G0026792.1 mouse_genomes_project 2 161939541 161945378 + Mybl2 protein_coding retained_intron MGP_BALBcJ_T0007359.1 MGP_BALBcJ_G0006031.1 mouse_genomes_project 2 161987904 162009811 + Gm11454 lincRNA lincRNA MGP_BALBcJ_T0054256.1 MGP_BALBcJ_G0025609.1 mouse_genomes_project 2 30847043 30927482 - MGP_BALBcJ_P0054256 Lmx1b protein_coding protein_coding MGP_BALBcJ_T0054257.1 MGP_BALBcJ_G0025609.1 mouse_genomes_project 2 30850415 30927468 - MGP_BALBcJ_P0054257 Lmx1b protein_coding protein_coding MGP_BALBcJ_T0054258.1 MGP_BALBcJ_G0025609.1 mouse_genomes_project 2 30853246 30919273 - Lmx1b protein_coding processed_transcript MGP_BALBcJ_T0013586.1 MGP_BALBcJ_G0011683.1 mouse_genomes_project 2 74848165 74848598 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010413.1 MGP_BALBcJ_G0008538.1 mouse_genomes_project 2 89756135 89756196 - Mir6999 miRNA miRNA MGP_BALBcJ_T0058463.1 MGP_BALBcJ_G0026696.1 mouse_genomes_project 2 153315809 153316310 - MGP_BALBcJ_P0058463 4930519P11Rik protein_coding protein_coding MGP_BALBcJ_T0056244.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91500802 91664889 - MGP_BALBcJ_P0056244 Ext2 protein_coding protein_coding MGP_BALBcJ_T0056245.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91535713 91664908 - MGP_BALBcJ_P0056245 Ext2 protein_coding protein_coding MGP_BALBcJ_T0056246.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91536195 91545189 - Ext2 protein_coding retained_intron MGP_BALBcJ_T0056247.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91536209 91664885 - MGP_BALBcJ_P0056247 Ext2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056248.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91543034 91547392 - MGP_BALBcJ_P0056248 Ext2 protein_coding protein_coding MGP_BALBcJ_T0056249.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91543617 91544588 - MGP_BALBcJ_P0056249 Ext2 protein_coding protein_coding MGP_BALBcJ_T0056250.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91556048 91664889 - Ext2 protein_coding processed_transcript MGP_BALBcJ_T0056251.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91603845 91638242 - Ext2 protein_coding retained_intron MGP_BALBcJ_T0056252.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91648701 91664905 - MGP_BALBcJ_P0056252 Ext2 protein_coding protein_coding MGP_BALBcJ_T0056253.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91655705 91664885 - Ext2 protein_coding retained_intron MGP_BALBcJ_T0056254.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91656130 91664888 - MGP_BALBcJ_P0056254 Ext2 protein_coding protein_coding MGP_BALBcJ_T0056255.1 MGP_BALBcJ_G0026148.1 mouse_genomes_project 2 91656515 91664893 - Ext2 protein_coding processed_transcript MGP_BALBcJ_T0013654.1 MGP_BALBcJ_G0011751.1 mouse_genomes_project 2 96174913 96175085 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056599.1 MGP_BALBcJ_G0026220.1 mouse_genomes_project 2 109005690 109024221 - MGP_BALBcJ_P0056599 Gm13941 protein_coding protein_coding MGP_BALBcJ_T0058118.1 MGP_BALBcJ_G0026591.1 mouse_genomes_project 2 147333963 147338037 + MGP_BALBcJ_P0058118 Cst12 protein_coding protein_coding MGP_BALBcJ_T0058119.1 MGP_BALBcJ_G0026591.1 mouse_genomes_project 2 147333974 147338146 + MGP_BALBcJ_P0058119 Cst12 protein_coding protein_coding MGP_BALBcJ_T0007147.1 MGP_BALBcJ_G0005858.1 mouse_genomes_project 2 25486676 25495535 - Gm13373 lincRNA lincRNA MGP_BALBcJ_T0100986.1 MGP_BALBcJ_G0039022.1 mouse_genomes_project 2 142787577 142787815 - Snord17 snoRNA snoRNA MGP_BALBcJ_T0013783.1 MGP_BALBcJ_G0011880.1 mouse_genomes_project 2 146190573 146190903 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102430.1 MGP_BALBcJ_G0040246.1 mouse_genomes_project 2 88054371 88055296 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0056829.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117173316 117193837 - MGP_BALBcJ_P0056829 Rmdn3 protein_coding protein_coding MGP_BALBcJ_T0056830.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117175647 117177468 - Rmdn3 protein_coding retained_intron MGP_BALBcJ_T0056831.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117179010 117184253 - Rmdn3 protein_coding retained_intron MGP_BALBcJ_T0056832.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117182969 117184262 - Rmdn3 protein_coding retained_intron MGP_BALBcJ_T0056833.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117190832 117193627 - MGP_BALBcJ_P0056833 Rmdn3 protein_coding protein_coding MGP_BALBcJ_T0056834.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117190862 117193751 - MGP_BALBcJ_P0056834 Rmdn3 protein_coding protein_coding MGP_BALBcJ_T0056835.1 MGP_BALBcJ_G0026306.1 mouse_genomes_project 2 117190872 117193767 - MGP_BALBcJ_P0056835 Rmdn3 protein_coding protein_coding MGP_BALBcJ_T0013435.1 MGP_BALBcJ_G0011532.1 mouse_genomes_project 2 18542972 18543626 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004003.1 MGP_BALBcJ_G0003563.1 mouse_genomes_project 2 72142730 72148189 + 4930445N08Rik antisense antisense MGP_BALBcJ_T0011484.1 MGP_BALBcJ_G0009609.1 mouse_genomes_project 2 76130316 76130546 - Gm23149 misc_RNA misc_RNA MGP_BALBcJ_T0013751.1 MGP_BALBcJ_G0011848.1 mouse_genomes_project 2 134874594 134875298 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055753.1 MGP_BALBcJ_G0025966.1 mouse_genomes_project 2 84716123 84717062 - MGP_BALBcJ_P0055753 Olfr1107 protein_coding protein_coding MGP_BALBcJ_T0058987.1 MGP_BALBcJ_G0026790.1 mouse_genomes_project 2 161842169 161869244 + MGP_BALBcJ_P0058987 Sgk2 protein_coding protein_coding MGP_BALBcJ_T0058988.1 MGP_BALBcJ_G0026790.1 mouse_genomes_project 2 161842341 161869243 + MGP_BALBcJ_P0058988 Sgk2 protein_coding protein_coding MGP_BALBcJ_T0058989.1 MGP_BALBcJ_G0026790.1 mouse_genomes_project 2 161853264 161862107 + Sgk2 protein_coding retained_intron MGP_BALBcJ_T0013412.1 MGP_BALBcJ_G0011509.1 mouse_genomes_project 2 12409305 12410101 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004090.1 MGP_BALBcJ_G0003621.1 mouse_genomes_project 2 139739652 139796601 - Macrod2os1 antisense antisense MGP_BALBcJ_T0054975.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62527907 62679189 - MGP_BALBcJ_P0054975 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054976.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62527918 62679284 - MGP_BALBcJ_P0054976 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054977.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62527918 62679189 - MGP_BALBcJ_P0054977 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054978.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62527918 62679189 - MGP_BALBcJ_P0054978 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054979.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62527918 62679136 - MGP_BALBcJ_P0054979 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054980.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62538705 62545569 - Cobll1 protein_coding processed_transcript MGP_BALBcJ_T0054981.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62566396 62679607 - MGP_BALBcJ_P0054981 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054982.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62574204 62679659 - MGP_BALBcJ_P0054982 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054983.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62576774 62676564 - Cobll1 protein_coding processed_transcript MGP_BALBcJ_T0054984.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62576807 62679136 - MGP_BALBcJ_P0054984 Cobll1 protein_coding protein_coding MGP_BALBcJ_T0054985.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62588357 62679610 - Cobll1 protein_coding processed_transcript MGP_BALBcJ_T0054986.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62590914 62679966 - Cobll1 protein_coding processed_transcript MGP_BALBcJ_T0054987.1 MGP_BALBcJ_G0025748.1 mouse_genomes_project 2 62591078 62679037 - Cobll1 protein_coding processed_transcript MGP_BALBcJ_T0017773.1 MGP_BALBcJ_G0015384.1 mouse_genomes_project 2 90685656 90744465 - Gm13791 processed_transcript processed_transcript MGP_BALBcJ_T0013795.1 MGP_BALBcJ_G0011892.1 mouse_genomes_project 2 150291706 150292157 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013530.1 MGP_BALBcJ_G0011627.1 mouse_genomes_project 2 54514393 54515084 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017804.1 MGP_BALBcJ_G0015397.1 mouse_genomes_project 2 115882530 116133081 - Gm13986 processed_transcript processed_transcript MGP_BALBcJ_T0017805.1 MGP_BALBcJ_G0015397.1 mouse_genomes_project 2 116091852 116132970 - Gm13986 processed_transcript processed_transcript MGP_BALBcJ_T0056447.1 MGP_BALBcJ_G0026185.1 mouse_genomes_project 2 102057489 102059473 + MGP_BALBcJ_P0056447 A930018P22Rik protein_coding protein_coding MGP_BALBcJ_T0059619.1 MGP_BALBcJ_G0026956.1 mouse_genomes_project 2 179209543 179274257 - MGP_BALBcJ_P0059619 Taf4 protein_coding unknown_likely_coding MGP_BALBcJ_T0059620.1 MGP_BALBcJ_G0026956.1 mouse_genomes_project 2 179209549 179275212 - MGP_BALBcJ_P0059620 Taf4 protein_coding protein_coding MGP_BALBcJ_T0059621.1 MGP_BALBcJ_G0026956.1 mouse_genomes_project 2 179218601 179219584 - Taf4 protein_coding processed_transcript MGP_BALBcJ_T0059622.1 MGP_BALBcJ_G0026956.1 mouse_genomes_project 2 179219379 179226665 - Taf4 protein_coding processed_transcript MGP_BALBcJ_T0010467.1 MGP_BALBcJ_G0008592.1 mouse_genomes_project 2 171970556 171970634 - Gm22773 miRNA miRNA MGP_BALBcJ_T0007134.1 MGP_BALBcJ_G0005850.1 mouse_genomes_project 2 22208325 22231507 - Gm13387 lincRNA lincRNA MGP_BALBcJ_T0007135.1 MGP_BALBcJ_G0005850.1 mouse_genomes_project 2 22227836 22231507 - Gm13387 lincRNA lincRNA MGP_BALBcJ_T0007136.1 MGP_BALBcJ_G0005850.1 mouse_genomes_project 2 22229927 22231434 - Gm13387 lincRNA lincRNA MGP_BALBcJ_T0017840.1 MGP_BALBcJ_G0015413.1 mouse_genomes_project 2 130264307 130292124 - 5330413P13Rik processed_transcript processed_transcript MGP_BALBcJ_T0017841.1 MGP_BALBcJ_G0015413.1 mouse_genomes_project 2 130288103 130292129 - 5330413P13Rik processed_transcript processed_transcript MGP_BALBcJ_T0017842.1 MGP_BALBcJ_G0015413.1 mouse_genomes_project 2 130288320 130292092 - 5330413P13Rik processed_transcript processed_transcript MGP_BALBcJ_T0102406.1 MGP_BALBcJ_G0040222.1 mouse_genomes_project 2 83695772 83696729 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0057497.1 MGP_BALBcJ_G0026443.1 mouse_genomes_project 2 125995530 126044154 - MGP_BALBcJ_P0057497 Nphp1 protein_coding protein_coding MGP_BALBcJ_T0057498.1 MGP_BALBcJ_G0026443.1 mouse_genomes_project 2 125995532 125999337 - Nphp1 protein_coding processed_transcript MGP_BALBcJ_T0057499.1 MGP_BALBcJ_G0026443.1 mouse_genomes_project 2 125995534 126044197 - MGP_BALBcJ_P0057499 Nphp1 protein_coding protein_coding MGP_BALBcJ_T0057500.1 MGP_BALBcJ_G0026443.1 mouse_genomes_project 2 126000410 126009112 - Nphp1 protein_coding retained_intron MGP_BALBcJ_T0010315.1 MGP_BALBcJ_G0008440.1 mouse_genomes_project 2 7488705 7488826 + Gm22072 miRNA miRNA MGP_BALBcJ_T0102433.1 MGP_BALBcJ_G0040249.1 mouse_genomes_project 2 105080426 105080619 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0055845.1 MGP_BALBcJ_G0026046.1 mouse_genomes_project 2 86778666 86779602 - MGP_BALBcJ_P0055845 protein_coding protein_coding MGP_BALBcJ_T0013590.1 MGP_BALBcJ_G0011687.1 mouse_genomes_project 2 76178337 76179583 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053871.1 MGP_BALBcJ_G0025552.1 mouse_genomes_project 2 28199740 28207047 - MGP_BALBcJ_P0053871 Tor1a protein_coding protein_coding MGP_BALBcJ_T0053872.1 MGP_BALBcJ_G0025552.1 mouse_genomes_project 2 28199793 28206986 - Tor1a protein_coding retained_intron MGP_BALBcJ_T0053873.1 MGP_BALBcJ_G0025552.1 mouse_genomes_project 2 28200125 28202962 - Tor1a protein_coding retained_intron MGP_BALBcJ_T0053874.1 MGP_BALBcJ_G0025552.1 mouse_genomes_project 2 28200166 28202989 - Tor1a protein_coding retained_intron MGP_BALBcJ_T0053875.1 MGP_BALBcJ_G0025552.1 mouse_genomes_project 2 28206024 28207002 - Tor1a protein_coding retained_intron MGP_BALBcJ_T0010324.1 MGP_BALBcJ_G0008449.1 mouse_genomes_project 2 7492093 7492187 + Mir466f-2 miRNA miRNA MGP_BALBcJ_T0055398.1 MGP_BALBcJ_G0025839.1 mouse_genomes_project 2 74230236 74233186 + MGP_BALBcJ_P0055398 Dfnb59 protein_coding protein_coding MGP_BALBcJ_T0055399.1 MGP_BALBcJ_G0025839.1 mouse_genomes_project 2 74230259 74237576 + MGP_BALBcJ_P0055399 Dfnb59 protein_coding protein_coding MGP_BALBcJ_T0055400.1 MGP_BALBcJ_G0025839.1 mouse_genomes_project 2 74232033 74240321 + MGP_BALBcJ_P0055400 Dfnb59 protein_coding protein_coding MGP_BALBcJ_T0004122.1 MGP_BALBcJ_G0003648.1 mouse_genomes_project 2 155097872 155104907 - Gm14252 antisense antisense MGP_BALBcJ_T0055791.1 MGP_BALBcJ_G0025995.1 mouse_genomes_project 2 85421011 85421944 - MGP_BALBcJ_P0055791 Olfr1137 protein_coding protein_coding MGP_BALBcJ_T0054880.1 MGP_BALBcJ_G0025732.1 mouse_genomes_project 2 57671868 57779662 - MGP_BALBcJ_P0054880 Ly75 protein_coding protein_coding MGP_BALBcJ_T0054881.1 MGP_BALBcJ_G0025732.1 mouse_genomes_project 2 57673525 57779590 - MGP_BALBcJ_P0054881 Ly75 protein_coding protein_coding MGP_BALBcJ_T0010403.1 MGP_BALBcJ_G0008528.1 mouse_genomes_project 2 70510169 70510294 - Gm25960 miRNA miRNA MGP_BALBcJ_T0058291.1 MGP_BALBcJ_G0026650.1 mouse_genomes_project 2 151290454 151291693 + MGP_BALBcJ_P0058291 Mcts2 protein_coding protein_coding MGP_BALBcJ_T0053699.1 MGP_BALBcJ_G0025526.1 mouse_genomes_project 2 27299364 27301440 - Zdhhc12 protein_coding processed_transcript MGP_BALBcJ_T0053700.1 MGP_BALBcJ_G0025526.1 mouse_genomes_project 2 27299364 27302069 - MGP_BALBcJ_P0053700 Zdhhc12 protein_coding protein_coding MGP_BALBcJ_T0053701.1 MGP_BALBcJ_G0025526.1 mouse_genomes_project 2 27299371 27302056 - MGP_BALBcJ_P0053701 Zdhhc12 protein_coding protein_coding MGP_BALBcJ_T0053702.1 MGP_BALBcJ_G0025526.1 mouse_genomes_project 2 27299751 27302037 - Zdhhc12 protein_coding retained_intron MGP_BALBcJ_T0013714.1 MGP_BALBcJ_G0011811.1 mouse_genomes_project 2 119094209 119094976 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057379.1 MGP_BALBcJ_G0026416.1 mouse_genomes_project 2 124825720 124849631 - MGP_BALBcJ_P0057379 Hdc protein_coding protein_coding MGP_BALBcJ_T0057380.1 MGP_BALBcJ_G0026416.1 mouse_genomes_project 2 124826637 124830229 - Hdc protein_coding processed_transcript MGP_BALBcJ_T0057381.1 MGP_BALBcJ_G0026416.1 mouse_genomes_project 2 124832203 124849614 - Hdc protein_coding retained_intron MGP_BALBcJ_T0057382.1 MGP_BALBcJ_G0026416.1 mouse_genomes_project 2 124836489 124839802 - Hdc protein_coding processed_transcript MGP_BALBcJ_T0057383.1 MGP_BALBcJ_G0026416.1 mouse_genomes_project 2 124847136 124850252 - Hdc protein_coding processed_transcript MGP_BALBcJ_T0053851.1 MGP_BALBcJ_G0025548.1 mouse_genomes_project 2 28060050 28065208 - Asb6 protein_coding retained_intron MGP_BALBcJ_T0053852.1 MGP_BALBcJ_G0025548.1 mouse_genomes_project 2 28060050 28067287 - MGP_BALBcJ_P0053852 Asb6 protein_coding protein_coding MGP_BALBcJ_T0053853.1 MGP_BALBcJ_G0025548.1 mouse_genomes_project 2 28061423 28065219 - MGP_BALBcJ_P0053853 Asb6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053854.1 MGP_BALBcJ_G0025548.1 mouse_genomes_project 2 28062109 28065245 - Asb6 protein_coding retained_intron MGP_BALBcJ_T0053855.1 MGP_BALBcJ_G0025548.1 mouse_genomes_project 2 28062413 28064448 - Asb6 protein_coding retained_intron MGP_BALBcJ_T0056440.1 MGP_BALBcJ_G0026181.1 mouse_genomes_project 2 101986285 101991331 + MGP_BALBcJ_P0056440 Gm10912 protein_coding protein_coding MGP_BALBcJ_T0099707.1 MGP_BALBcJ_G0037743.1 mouse_genomes_project 2 151013131 151013194 + Gm27343 snRNA snRNA MGP_BALBcJ_T0058286.1 MGP_BALBcJ_G0026649.1 mouse_genomes_project 2 151272516 151312380 + MGP_BALBcJ_P0058286 H13 protein_coding protein_coding MGP_BALBcJ_T0058287.1 MGP_BALBcJ_G0026649.1 mouse_genomes_project 2 151272541 151286847 + H13 protein_coding retained_intron MGP_BALBcJ_T0058288.1 MGP_BALBcJ_G0026649.1 mouse_genomes_project 2 151272543 151308781 + MGP_BALBcJ_P0058288 H13 protein_coding protein_coding MGP_BALBcJ_T0058289.1 MGP_BALBcJ_G0026649.1 mouse_genomes_project 2 151272543 151290112 + MGP_BALBcJ_P0058289 H13 protein_coding protein_coding MGP_BALBcJ_T0058290.1 MGP_BALBcJ_G0026649.1 mouse_genomes_project 2 151272589 151307873 + MGP_BALBcJ_P0058290 H13 protein_coding protein_coding MGP_BALBcJ_T0058292.1 MGP_BALBcJ_G0026649.1 mouse_genomes_project 2 151295582 151300012 + H13 protein_coding retained_intron MGP_BALBcJ_T0013480.1 MGP_BALBcJ_G0011577.1 mouse_genomes_project 2 36073728 36074334 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056816.1 MGP_BALBcJ_G0026304.1 mouse_genomes_project 2 117084770 117106992 + MGP_BALBcJ_P0056816 Casc5 protein_coding protein_coding MGP_BALBcJ_T0056817.1 MGP_BALBcJ_G0026304.1 mouse_genomes_project 2 117084770 117142765 + MGP_BALBcJ_P0056817 Casc5 protein_coding protein_coding MGP_BALBcJ_T0056818.1 MGP_BALBcJ_G0026304.1 mouse_genomes_project 2 117084798 117103689 + MGP_BALBcJ_P0056818 Casc5 protein_coding protein_coding MGP_BALBcJ_T0056819.1 MGP_BALBcJ_G0026304.1 mouse_genomes_project 2 117084801 117110639 + MGP_BALBcJ_P0056819 Casc5 protein_coding protein_coding MGP_BALBcJ_T0056820.1 MGP_BALBcJ_G0026304.1 mouse_genomes_project 2 117094994 117144143 + MGP_BALBcJ_P0056820 Casc5 protein_coding protein_coding MGP_BALBcJ_T0058681.1 MGP_BALBcJ_G0026734.1 mouse_genomes_project 2 154904495 154906250 + MGP_BALBcJ_P0058681 Romo1 protein_coding protein_coding MGP_BALBcJ_T0058682.1 MGP_BALBcJ_G0026734.1 mouse_genomes_project 2 154904689 154906247 + MGP_BALBcJ_P0058682 Romo1 protein_coding protein_coding MGP_BALBcJ_T0058683.1 MGP_BALBcJ_G0026734.1 mouse_genomes_project 2 154904693 154906236 + MGP_BALBcJ_P0058683 Romo1 protein_coding protein_coding MGP_BALBcJ_T0058684.1 MGP_BALBcJ_G0026734.1 mouse_genomes_project 2 154904696 154906247 + MGP_BALBcJ_P0058684 Romo1 protein_coding protein_coding MGP_BALBcJ_T0004054.1 MGP_BALBcJ_G0003596.1 mouse_genomes_project 2 119339476 119342085 - Gm14978 antisense antisense MGP_BALBcJ_T0059093.1 MGP_BALBcJ_G0026828.1 mouse_genomes_project 2 163350527 163382106 + MGP_BALBcJ_P0059093 Gm20458 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058604.1 MGP_BALBcJ_G0026723.1 mouse_genomes_project 2 154703826 154705853 + MGP_BALBcJ_P0058604 Gm15557 protein_coding protein_coding MGP_BALBcJ_T0010345.1 MGP_BALBcJ_G0008470.1 mouse_genomes_project 2 7517228 7517326 + Mir669m-1 miRNA miRNA MGP_BALBcJ_T0004125.1 MGP_BALBcJ_G0003651.1 mouse_genomes_project 2 156888978 156911786 - 2010009K17Rik antisense antisense MGP_BALBcJ_T0058356.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151856208 151885424 + MGP_BALBcJ_P0058356 Pofut1 protein_coding protein_coding MGP_BALBcJ_T0058357.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151856216 151881089 + MGP_BALBcJ_P0058357 Pofut1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058358.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151856216 151881089 + MGP_BALBcJ_P0058358 Pofut1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058359.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151856226 151877067 + MGP_BALBcJ_P0058359 Pofut1 protein_coding protein_coding MGP_BALBcJ_T0058360.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151856244 151865741 + Pofut1 protein_coding retained_intron MGP_BALBcJ_T0058361.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151856253 151881680 + MGP_BALBcJ_P0058361 Pofut1 protein_coding protein_coding MGP_BALBcJ_T0058362.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151872642 151882463 + MGP_BALBcJ_P0058362 Pofut1 protein_coding protein_coding MGP_BALBcJ_T0058363.1 MGP_BALBcJ_G0026666.1 mouse_genomes_project 2 151872732 151883240 + MGP_BALBcJ_P0058363 Pofut1 protein_coding protein_coding MGP_BALBcJ_T0052341.1 MGP_BALBcJ_G0025290.1 mouse_genomes_project 2 1880266 1900319 + MGP_BALBcJ_P0052341 Phyh protein_coding protein_coding MGP_BALBcJ_T0052342.1 MGP_BALBcJ_G0025290.1 mouse_genomes_project 2 1880327 1890633 + Phyh protein_coding processed_transcript MGP_BALBcJ_T0052343.1 MGP_BALBcJ_G0025290.1 mouse_genomes_project 2 1899079 1899932 + Phyh protein_coding processed_transcript MGP_BALBcJ_T0057547.1 MGP_BALBcJ_G0026457.1 mouse_genomes_project 2 127304678 127314715 - MGP_BALBcJ_P0057547 protein_coding protein_coding MGP_BALBcJ_T0056587.1 MGP_BALBcJ_G0026216.1 mouse_genomes_project 2 108335276 108335879 + MGP_BALBcJ_P0056587 protein_coding protein_coding MGP_BALBcJ_T0057826.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130977022 130990405 - Gpcpd1 protein_coding retained_intron MGP_BALBcJ_T0057827.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130977022 131027751 - MGP_BALBcJ_P0057827 Gpcpd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057828.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130977022 131027821 - MGP_BALBcJ_P0057828 Gpcpd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057829.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130977022 131027808 - MGP_BALBcJ_P0057829 Gpcpd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057830.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130977922 131027812 - MGP_BALBcJ_P0057830 Gpcpd1 protein_coding protein_coding MGP_BALBcJ_T0057831.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130982489 130986501 - MGP_BALBcJ_P0057831 Gpcpd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057832.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 130998833 131027760 - MGP_BALBcJ_P0057832 Gpcpd1 protein_coding protein_coding MGP_BALBcJ_T0057833.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 131002810 131037302 - MGP_BALBcJ_P0057833 Gpcpd1 protein_coding protein_coding MGP_BALBcJ_T0057834.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 131002922 131027790 - Gpcpd1 protein_coding processed_transcript MGP_BALBcJ_T0057835.1 MGP_BALBcJ_G0026519.1 mouse_genomes_project 2 131013647 131027819 - Gpcpd1 protein_coding processed_transcript MGP_BALBcJ_T0053931.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28820453 28865286 + MGP_BALBcJ_P0053931 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053932.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28820593 28843077 + MGP_BALBcJ_P0053932 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053933.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28820594 28832704 + Fubp3 protein_coding retained_intron MGP_BALBcJ_T0053934.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28820616 28846368 + MGP_BALBcJ_P0053934 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053935.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28820619 28865279 + MGP_BALBcJ_P0053935 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053936.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28820629 28846354 + MGP_BALBcJ_P0053936 Fubp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053937.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28851076 28860873 + MGP_BALBcJ_P0053937 Fubp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053938.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28852511 28863698 + MGP_BALBcJ_P0053938 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053939.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28860296 28864476 + MGP_BALBcJ_P0053939 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053940.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28862526 28865278 + MGP_BALBcJ_P0053940 Fubp3 protein_coding protein_coding MGP_BALBcJ_T0053941.1 MGP_BALBcJ_G0025560.1 mouse_genomes_project 2 28862944 28865280 + Fubp3 protein_coding retained_intron MGP_BALBcJ_T0053703.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27305703 27333133 - MGP_BALBcJ_P0053703 Zer1 protein_coding protein_coding MGP_BALBcJ_T0053704.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27305703 27333005 - MGP_BALBcJ_P0053704 Zer1 protein_coding protein_coding MGP_BALBcJ_T0053705.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27308381 27310352 - Zer1 protein_coding retained_intron MGP_BALBcJ_T0053706.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27309037 27311321 - Zer1 protein_coding retained_intron MGP_BALBcJ_T0053707.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27313869 27333136 - Zer1 protein_coding retained_intron MGP_BALBcJ_T0053708.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27314130 27333130 - Zer1 protein_coding retained_intron MGP_BALBcJ_T0053709.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27315361 27319335 - Zer1 protein_coding retained_intron MGP_BALBcJ_T0053710.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27315738 27316204 - Zer1 protein_coding processed_transcript MGP_BALBcJ_T0053711.1 MGP_BALBcJ_G0025527.1 mouse_genomes_project 2 27316076 27317104 - Zer1 protein_coding retained_intron MGP_BALBcJ_T0055719.1 MGP_BALBcJ_G0025933.1 mouse_genomes_project 2 83810238 83811198 - MGP_BALBcJ_P0055719 Olfr1047 protein_coding protein_coding MGP_BALBcJ_T0007150.1 MGP_BALBcJ_G0005861.1 mouse_genomes_project 2 27888735 27900647 - Gm14486 lincRNA lincRNA MGP_BALBcJ_T0007151.1 MGP_BALBcJ_G0005861.1 mouse_genomes_project 2 27888880 27908738 - Gm14486 lincRNA lincRNA MGP_BALBcJ_T0013809.1 MGP_BALBcJ_G0011906.1 mouse_genomes_project 2 154239060 154239386 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013500.1 MGP_BALBcJ_G0011597.1 mouse_genomes_project 2 43807297 43807647 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004139.1 MGP_BALBcJ_G0003661.1 mouse_genomes_project 2 162564687 162572402 - Gm16316 antisense antisense MGP_BALBcJ_T0055768.1 MGP_BALBcJ_G0025981.1 mouse_genomes_project 2 85161982 85162927 + MGP_BALBcJ_P0055768 Olfr1126 protein_coding protein_coding MGP_BALBcJ_T0058110.1 MGP_BALBcJ_G0026587.1 mouse_genomes_project 2 147249689 147288281 - MGP_BALBcJ_P0058110 Napb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058111.1 MGP_BALBcJ_G0026587.1 mouse_genomes_project 2 147249689 147288335 - MGP_BALBcJ_P0058111 Napb protein_coding protein_coding MGP_BALBcJ_T0058112.1 MGP_BALBcJ_G0026587.1 mouse_genomes_project 2 147262116 147288259 - Napb protein_coding retained_intron MGP_BALBcJ_T0057510.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126383462 126387440 + Bcl2l11 protein_coding processed_transcript MGP_BALBcJ_T0057511.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126383462 126388920 + MGP_BALBcJ_P0057511 Bcl2l11 protein_coding protein_coding MGP_BALBcJ_T0057512.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126383462 126418715 + MGP_BALBcJ_P0057512 Bcl2l11 protein_coding protein_coding MGP_BALBcJ_T0057513.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126383463 126420301 + MGP_BALBcJ_P0057513 Bcl2l11 protein_coding protein_coding MGP_BALBcJ_T0057514.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126383464 126416194 + MGP_BALBcJ_P0057514 Bcl2l11 protein_coding protein_coding MGP_BALBcJ_T0057515.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126383474 126418982 + MGP_BALBcJ_P0057515 Bcl2l11 protein_coding protein_coding MGP_BALBcJ_T0057516.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126384999 126387570 + Bcl2l11 protein_coding processed_transcript MGP_BALBcJ_T0057517.1 MGP_BALBcJ_G0026447.1 mouse_genomes_project 2 126385555 126386162 + Bcl2l11 protein_coding processed_transcript MGP_BALBcJ_T0056630.1 MGP_BALBcJ_G0026250.1 mouse_genomes_project 2 110011739 110012678 - MGP_BALBcJ_P0056630 protein_coding protein_coding MGP_BALBcJ_T0100936.1 MGP_BALBcJ_G0038972.1 mouse_genomes_project 2 29490276 29490361 + Gm25632 snoRNA snoRNA MGP_BALBcJ_T0013422.1 MGP_BALBcJ_G0011519.1 mouse_genomes_project 2 15322693 15323172 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059143.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163683857 163690525 + MGP_BALBcJ_P0059143 Snx21 protein_coding protein_coding MGP_BALBcJ_T0059144.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163684025 163691848 + MGP_BALBcJ_P0059144 Snx21 protein_coding protein_coding MGP_BALBcJ_T0059145.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163684025 163691090 + MGP_BALBcJ_P0059145 Snx21 protein_coding protein_coding MGP_BALBcJ_T0059146.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163684051 163685667 + MGP_BALBcJ_P0059146 Snx21 protein_coding protein_coding MGP_BALBcJ_T0059147.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163684828 163690662 + MGP_BALBcJ_P0059147 Snx21 protein_coding protein_coding MGP_BALBcJ_T0059148.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163688448 163691854 + Snx21 protein_coding retained_intron MGP_BALBcJ_T0059149.1 MGP_BALBcJ_G0026849.1 mouse_genomes_project 2 163689689 163691846 + Snx21 protein_coding processed_transcript MGP_BALBcJ_T0007296.1 MGP_BALBcJ_G0005978.1 mouse_genomes_project 2 122356085 122362385 - 4930517E11Rik lincRNA lincRNA MGP_BALBcJ_T0007173.1 MGP_BALBcJ_G0005878.1 mouse_genomes_project 2 43108448 43112558 - Gm13467 lincRNA lincRNA MGP_BALBcJ_T0059156.1 MGP_BALBcJ_G0026852.1 mouse_genomes_project 2 163722967 163727153 + MGP_BALBcJ_P0059156 Zswim1 protein_coding protein_coding MGP_BALBcJ_T0059157.1 MGP_BALBcJ_G0026852.1 mouse_genomes_project 2 163723294 163725550 + MGP_BALBcJ_P0059157 Zswim1 protein_coding protein_coding MGP_BALBcJ_T0004160.1 MGP_BALBcJ_G0003678.1 mouse_genomes_project 2 171408370 171423522 + Gm14273 antisense antisense MGP_BALBcJ_T0056448.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102078589 102352291 - MGP_BALBcJ_P0056448 D430041D05Rik protein_coding protein_coding MGP_BALBcJ_T0056449.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102082556 102167981 - D430041D05Rik protein_coding retained_intron MGP_BALBcJ_T0056450.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102084287 102196214 - MGP_BALBcJ_P0056450 D430041D05Rik protein_coding protein_coding MGP_BALBcJ_T0056451.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102087683 102093655 - D430041D05Rik protein_coding retained_intron MGP_BALBcJ_T0056452.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102118633 102178590 - D430041D05Rik protein_coding retained_intron MGP_BALBcJ_T0056453.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102140788 102195380 - D430041D05Rik protein_coding retained_intron MGP_BALBcJ_T0056454.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102192517 102351949 - MGP_BALBcJ_P0056454 D430041D05Rik protein_coding protein_coding MGP_BALBcJ_T0056455.1 MGP_BALBcJ_G0026186.1 mouse_genomes_project 2 102192810 102351950 - MGP_BALBcJ_P0056455 D430041D05Rik protein_coding protein_coding MGP_BALBcJ_T0055758.1 MGP_BALBcJ_G0025971.1 mouse_genomes_project 2 84850235 84851192 + MGP_BALBcJ_P0055758 Olfr1112 protein_coding protein_coding MGP_BALBcJ_T0003889.1 MGP_BALBcJ_G0003478.1 mouse_genomes_project 2 14621187 14622126 + Gm13324 antisense antisense MGP_BALBcJ_T0013696.1 MGP_BALBcJ_G0011793.1 mouse_genomes_project 2 109726423 109727153 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013569.1 MGP_BALBcJ_G0011666.1 mouse_genomes_project 2 68352042 68352940 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003984.1 MGP_BALBcJ_G0003552.1 mouse_genomes_project 2 67996246 68001953 - Erich2os antisense antisense MGP_BALBcJ_T0102397.1 MGP_BALBcJ_G0040213.1 mouse_genomes_project 2 82662666 82665208 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100969.1 MGP_BALBcJ_G0039005.1 mouse_genomes_project 2 105824979 105825111 - Gm23439 snoRNA snoRNA MGP_BALBcJ_T0058802.1 MGP_BALBcJ_G0026753.1 mouse_genomes_project 2 155999416 156078249 - MGP_BALBcJ_P0058802 Mroh8 protein_coding protein_coding MGP_BALBcJ_T0058803.1 MGP_BALBcJ_G0026753.1 mouse_genomes_project 2 156013637 156015051 - Mroh8 protein_coding processed_transcript MGP_BALBcJ_T0058804.1 MGP_BALBcJ_G0026753.1 mouse_genomes_project 2 156036443 156077989 - Mroh8 protein_coding processed_transcript MGP_BALBcJ_T0058805.1 MGP_BALBcJ_G0026753.1 mouse_genomes_project 2 156051142 156054624 - Mroh8 protein_coding processed_transcript MGP_BALBcJ_T0058806.1 MGP_BALBcJ_G0026753.1 mouse_genomes_project 2 156062853 156078249 - Mroh8 protein_coding processed_transcript MGP_BALBcJ_T0003960.1 MGP_BALBcJ_G0003533.1 mouse_genomes_project 2 55697989 55708225 + Gm13544 antisense antisense MGP_BALBcJ_T0099664.1 MGP_BALBcJ_G0037700.1 mouse_genomes_project 2 22432548 22432643 + Gm25220 snRNA snRNA MGP_BALBcJ_T0010432.1 MGP_BALBcJ_G0008557.1 mouse_genomes_project 2 116272388 116272477 - Gm22800 miRNA miRNA MGP_BALBcJ_T0053983.1 MGP_BALBcJ_G0025569.1 mouse_genomes_project 2 29310392 29345826 - MGP_BALBcJ_P0053983 Fam78a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053986.1 MGP_BALBcJ_G0025569.1 mouse_genomes_project 2 29327674 29344936 - MGP_BALBcJ_P0053986 Fam78a protein_coding protein_coding MGP_BALBcJ_T0053987.1 MGP_BALBcJ_G0025569.1 mouse_genomes_project 2 29330227 29340505 - Fam78a protein_coding processed_transcript MGP_BALBcJ_T0053988.1 MGP_BALBcJ_G0025569.1 mouse_genomes_project 2 29344424 29346014 - Fam78a protein_coding processed_transcript MGP_BALBcJ_T0017834.1 MGP_BALBcJ_G0015409.1 mouse_genomes_project 2 127571274 127581924 + Gm14023 processed_transcript processed_transcript MGP_BALBcJ_T0102385.1 MGP_BALBcJ_G0040201.1 mouse_genomes_project 2 32138199 32138964 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102382.1 MGP_BALBcJ_G0040198.1 mouse_genomes_project 2 19587660 19588329 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058850.1 MGP_BALBcJ_G0026761.1 mouse_genomes_project 2 156732466 156762974 + MGP_BALBcJ_P0058850 Vstm2l protein_coding protein_coding MGP_BALBcJ_T0010369.1 MGP_BALBcJ_G0008494.1 mouse_genomes_project 2 23721250 23721323 + Mir126a miRNA miRNA MGP_BALBcJ_T0013757.1 MGP_BALBcJ_G0011854.1 mouse_genomes_project 2 138608034 138608415 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013537.1 MGP_BALBcJ_G0011634.1 mouse_genomes_project 2 56317517 56317846 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100942.1 MGP_BALBcJ_G0038978.1 mouse_genomes_project 2 37609680 37609806 + Gm24467 snoRNA snoRNA MGP_BALBcJ_T0007241.1 MGP_BALBcJ_G0005937.1 mouse_genomes_project 2 90918040 90930257 - Gm13802 lincRNA lincRNA MGP_BALBcJ_T0057651.1 MGP_BALBcJ_G0026483.1 mouse_genomes_project 2 128958409 128960057 + Mrps26 protein_coding retained_intron MGP_BALBcJ_T0057652.1 MGP_BALBcJ_G0026483.1 mouse_genomes_project 2 128958409 128963145 + MGP_BALBcJ_P0057652 Mrps26 protein_coding protein_coding MGP_BALBcJ_T0007212.1 MGP_BALBcJ_G0005912.1 mouse_genomes_project 2 72263460 72265302 + Gm14396 lincRNA lincRNA MGP_BALBcJ_T0007213.1 MGP_BALBcJ_G0005912.1 mouse_genomes_project 2 72263541 72265302 + Gm14396 lincRNA lincRNA MGP_BALBcJ_T0052828.1 MGP_BALBcJ_G0025369.1 mouse_genomes_project 2 20124311 20165204 - MGP_BALBcJ_P0052828 Mastl protein_coding protein_coding MGP_BALBcJ_T0052829.1 MGP_BALBcJ_G0025369.1 mouse_genomes_project 2 20145867 20165077 - Mastl protein_coding processed_transcript MGP_BALBcJ_T0056537.1 MGP_BALBcJ_G0026204.1 mouse_genomes_project 2 104654454 104834168 + MGP_BALBcJ_P0056537 Mpped2 protein_coding protein_coding MGP_BALBcJ_T0056538.1 MGP_BALBcJ_G0026204.1 mouse_genomes_project 2 104656403 104707919 + MGP_BALBcJ_P0056538 Mpped2 protein_coding protein_coding MGP_BALBcJ_T0056539.1 MGP_BALBcJ_G0026204.1 mouse_genomes_project 2 104656784 104833014 + MGP_BALBcJ_P0056539 Mpped2 protein_coding protein_coding MGP_BALBcJ_T0056540.1 MGP_BALBcJ_G0026204.1 mouse_genomes_project 2 104656806 104747469 + Mpped2 protein_coding processed_transcript MGP_BALBcJ_T0056541.1 MGP_BALBcJ_G0026204.1 mouse_genomes_project 2 104657037 104832843 + MGP_BALBcJ_P0056541 Mpped2 protein_coding protein_coding MGP_BALBcJ_T0056542.1 MGP_BALBcJ_G0026204.1 mouse_genomes_project 2 104693363 104747588 + Mpped2 protein_coding processed_transcript MGP_BALBcJ_T0007381.1 MGP_BALBcJ_G0006049.1 mouse_genomes_project 2 167139977 167141888 - E130018N17Rik lincRNA lincRNA MGP_BALBcJ_T0013765.1 MGP_BALBcJ_G0011862.1 mouse_genomes_project 2 142363195 142363623 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010428.1 MGP_BALBcJ_G0008553.1 mouse_genomes_project 2 110612408 110612539 + Gm44374 miRNA miRNA MGP_BALBcJ_T0056213.1 MGP_BALBcJ_G0026142.1 mouse_genomes_project 2 90796075 90877274 - MGP_BALBcJ_P0056213 Prdm11 protein_coding protein_coding MGP_BALBcJ_T0056214.1 MGP_BALBcJ_G0026142.1 mouse_genomes_project 2 90806233 90877847 - MGP_BALBcJ_P0056214 Prdm11 protein_coding protein_coding MGP_BALBcJ_T0056215.1 MGP_BALBcJ_G0026142.1 mouse_genomes_project 2 90817549 90845220 - MGP_BALBcJ_P0056215 Prdm11 protein_coding protein_coding MGP_BALBcJ_T0056216.1 MGP_BALBcJ_G0026142.1 mouse_genomes_project 2 90841214 90845247 - Prdm11 protein_coding processed_transcript MGP_BALBcJ_T0056217.1 MGP_BALBcJ_G0026142.1 mouse_genomes_project 2 90843963 90877870 - MGP_BALBcJ_P0056217 Prdm11 protein_coding protein_coding MGP_BALBcJ_T0052646.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12133576 12166618 + MGP_BALBcJ_P0052646 Arl5b protein_coding protein_coding MGP_BALBcJ_T0052648.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12139421 12166622 + MGP_BALBcJ_P0052648 Arl5b protein_coding protein_coding MGP_BALBcJ_T0052649.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12139468 12160775 + MGP_BALBcJ_P0052649 Arl5b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052650.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12139528 12161737 + MGP_BALBcJ_P0052650 Arl5b protein_coding protein_coding MGP_BALBcJ_T0052651.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12152318 12160785 + MGP_BALBcJ_P0052651 Arl5b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052652.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12154141 12157351 + Arl5b protein_coding retained_intron MGP_BALBcJ_T0052653.1 MGP_BALBcJ_G0025339.1 mouse_genomes_project 2 12159178 12166618 + MGP_BALBcJ_P0052653 Arl5b protein_coding protein_coding MGP_BALBcJ_T0054717.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49500823 49503956 + Rif1 protein_coding processed_transcript MGP_BALBcJ_T0054718.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49500888 49551995 + MGP_BALBcJ_P0054718 Rif1 protein_coding protein_coding MGP_BALBcJ_T0054719.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49500888 49551997 + MGP_BALBcJ_P0054719 Rif1 protein_coding protein_coding MGP_BALBcJ_T0054720.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49500901 49550817 + MGP_BALBcJ_P0054720 Rif1 protein_coding unknown_likely_coding MGP_BALBcJ_T0054721.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49517315 49536172 + Rif1 protein_coding processed_transcript MGP_BALBcJ_T0054722.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49521159 49526408 + Rif1 protein_coding processed_transcript MGP_BALBcJ_T0054723.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49540168 49551670 + Rif1 protein_coding processed_transcript MGP_BALBcJ_T0054724.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49540645 49551723 + Rif1 protein_coding processed_transcript MGP_BALBcJ_T0054725.1 MGP_BALBcJ_G0025703.1 mouse_genomes_project 2 49541317 49551995 + Rif1 protein_coding processed_transcript MGP_BALBcJ_T0057468.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125691254 125699576 - MGP_BALBcJ_P0057468 Fahd2a protein_coding protein_coding MGP_BALBcJ_T0057469.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125691255 125699591 - Fahd2a protein_coding retained_intron MGP_BALBcJ_T0057470.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125691310 125693359 - Fahd2a protein_coding processed_transcript MGP_BALBcJ_T0057471.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125691876 125699583 - Fahd2a protein_coding processed_transcript MGP_BALBcJ_T0057472.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125693161 125699506 - Fahd2a protein_coding processed_transcript MGP_BALBcJ_T0057473.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125693450 125699542 - Fahd2a protein_coding retained_intron MGP_BALBcJ_T0057474.1 MGP_BALBcJ_G0026436.1 mouse_genomes_project 2 125695470 125699534 - Fahd2a protein_coding processed_transcript MGP_BALBcJ_T0055701.1 MGP_BALBcJ_G0025916.1 mouse_genomes_project 2 83426852 83427788 + MGP_BALBcJ_P0055701 Olfr1023 protein_coding protein_coding MGP_BALBcJ_T0059409.1 MGP_BALBcJ_G0026899.1 mouse_genomes_project 2 167169569 167218407 - MGP_BALBcJ_P0059409 Gm20716 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059141.1 MGP_BALBcJ_G0026848.1 mouse_genomes_project 2 163674560 163677141 - MGP_BALBcJ_P0059141 Tnnc2 protein_coding protein_coding MGP_BALBcJ_T0059142.1 MGP_BALBcJ_G0026848.1 mouse_genomes_project 2 163675343 163677367 - Tnnc2 protein_coding processed_transcript MGP_BALBcJ_T0055919.1 MGP_BALBcJ_G0026099.1 mouse_genomes_project 2 88183363 88184057 - Ptprj protein_coding processed_transcript MGP_BALBcJ_T0055920.1 MGP_BALBcJ_G0026099.1 mouse_genomes_project 2 88183365 88238092 - MGP_BALBcJ_P0055920 Ptprj protein_coding protein_coding MGP_BALBcJ_T0056605.1 MGP_BALBcJ_G0026225.1 mouse_genomes_project 2 109199735 109200647 - MGP_BALBcJ_P0056605 Olfr1277 protein_coding protein_coding MGP_BALBcJ_T0058103.1 MGP_BALBcJ_G0026583.1 mouse_genomes_project 2 146956134 146959857 - MGP_BALBcJ_P0058103 Thbd protein_coding protein_coding MGP_BALBcJ_T0056994.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118513429 118562107 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0056995.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118513429 118561967 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0056996.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118521001 118562107 + MGP_BALBcJ_P0056996 Capn3 protein_coding protein_coding MGP_BALBcJ_T0056997.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118521001 118562107 + MGP_BALBcJ_P0056997 Capn3 protein_coding protein_coding MGP_BALBcJ_T0056998.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118521295 118562107 + MGP_BALBcJ_P0056998 Capn3 protein_coding unknown_likely_coding MGP_BALBcJ_T0056999.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118534496 118562107 + MGP_BALBcJ_P0056999 Capn3 protein_coding protein_coding MGP_BALBcJ_T0057000.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118534498 118562107 + MGP_BALBcJ_P0057000 Capn3 protein_coding protein_coding MGP_BALBcJ_T0057001.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118534548 118562107 + MGP_BALBcJ_P0057001 Capn3 protein_coding protein_coding MGP_BALBcJ_T0057002.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118534554 118561708 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0057003.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118534554 118562107 + MGP_BALBcJ_P0057003 Capn3 protein_coding protein_coding MGP_BALBcJ_T0057004.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118541904 118542179 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0057005.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118557436 118560411 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0057006.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118558423 118560236 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0057007.1 MGP_BALBcJ_G0026341.1 mouse_genomes_project 2 118558497 118560589 + Capn3 protein_coding processed_transcript MGP_BALBcJ_T0007316.1 MGP_BALBcJ_G0005995.1 mouse_genomes_project 2 135668924 135669674 + Gm28214 lincRNA lincRNA MGP_BALBcJ_T0004029.1 MGP_BALBcJ_G0003580.1 mouse_genomes_project 2 103024534 103037841 - Wt1os antisense antisense MGP_BALBcJ_T0004030.1 MGP_BALBcJ_G0003580.1 mouse_genomes_project 2 103024857 103073923 - Wt1os antisense antisense MGP_BALBcJ_T0004031.1 MGP_BALBcJ_G0003580.1 mouse_genomes_project 2 103025907 103026108 - Wt1os antisense antisense MGP_BALBcJ_T0004032.1 MGP_BALBcJ_G0003580.1 mouse_genomes_project 2 103041665 103073816 - Wt1os antisense antisense MGP_BALBcJ_T0007298.1 MGP_BALBcJ_G0005980.1 mouse_genomes_project 2 123526453 123527745 - Gm14003 lincRNA lincRNA MGP_BALBcJ_T0052455.1 MGP_BALBcJ_G0025310.1 mouse_genomes_project 2 7077043 7102150 - MGP_BALBcJ_P0052455 Atp5c1 protein_coding protein_coding MGP_BALBcJ_T0052456.1 MGP_BALBcJ_G0025310.1 mouse_genomes_project 2 7077057 7102167 - MGP_BALBcJ_P0052456 Atp5c1 protein_coding protein_coding MGP_BALBcJ_T0052457.1 MGP_BALBcJ_G0025310.1 mouse_genomes_project 2 7077827 7102126 - MGP_BALBcJ_P0052457 Atp5c1 protein_coding protein_coding MGP_BALBcJ_T0052458.1 MGP_BALBcJ_G0025310.1 mouse_genomes_project 2 7084393 7101582 - MGP_BALBcJ_P0052458 Atp5c1 protein_coding protein_coding MGP_BALBcJ_T0052459.1 MGP_BALBcJ_G0025310.1 mouse_genomes_project 2 7084537 7101899 - MGP_BALBcJ_P0052459 Atp5c1 protein_coding protein_coding MGP_BALBcJ_T0052460.1 MGP_BALBcJ_G0025310.1 mouse_genomes_project 2 7085888 7101778 - MGP_BALBcJ_P0052460 Atp5c1 protein_coding protein_coding MGP_BALBcJ_T0055698.1 MGP_BALBcJ_G0025913.1 mouse_genomes_project 2 83370486 83371419 - MGP_BALBcJ_P0055698 Olfr1019 protein_coding protein_coding MGP_BALBcJ_T0058028.1 MGP_BALBcJ_G0026566.1 mouse_genomes_project 2 143119697 143121010 + MGP_BALBcJ_P0058028 Gm561 protein_coding protein_coding MGP_BALBcJ_T0007222.1 MGP_BALBcJ_G0005920.1 mouse_genomes_project 2 73308901 73309482 - Gm13656 lincRNA lincRNA MGP_BALBcJ_T0007208.1 MGP_BALBcJ_G0005908.1 mouse_genomes_project 2 71677459 71678872 - A630050E04Rik lincRNA lincRNA MGP_BALBcJ_T0052759.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17939773 18060170 - MGP_BALBcJ_P0052759 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052760.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17939773 18061330 - MGP_BALBcJ_P0052760 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052761.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17939794 18060169 - MGP_BALBcJ_P0052761 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052762.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17940448 18060975 - MGP_BALBcJ_P0052762 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052763.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17941806 17945102 - Arhgap21 protein_coding retained_intron MGP_BALBcJ_T0052764.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17941897 17975738 - MGP_BALBcJ_P0052764 Arhgap21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052765.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17942098 17951743 - Arhgap21 protein_coding retained_intron MGP_BALBcJ_T0052766.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17942234 17946486 - Arhgap21 protein_coding retained_intron MGP_BALBcJ_T0052767.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17944895 17947560 - Arhgap21 protein_coding processed_transcript MGP_BALBcJ_T0052768.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17944896 17951736 - Arhgap21 protein_coding processed_transcript MGP_BALBcJ_T0052769.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17950769 17963764 - MGP_BALBcJ_P0052769 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052770.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17951283 17952957 - Arhgap21 protein_coding retained_intron MGP_BALBcJ_T0052771.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17978866 18007221 - Arhgap21 protein_coding processed_transcript MGP_BALBcJ_T0052772.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 17982408 18035922 - MGP_BALBcJ_P0052772 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052773.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 18007326 18061074 - MGP_BALBcJ_P0052773 Arhgap21 protein_coding protein_coding MGP_BALBcJ_T0052774.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 18060046 18060933 - Arhgap21 protein_coding processed_transcript MGP_BALBcJ_T0052775.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 18060071 18061281 - Arhgap21 protein_coding processed_transcript MGP_BALBcJ_T0052776.1 MGP_BALBcJ_G0025359.1 mouse_genomes_project 2 18060138 18061329 - Arhgap21 protein_coding processed_transcript MGP_BALBcJ_T0058927.1 MGP_BALBcJ_G0026780.1 mouse_genomes_project 2 159489326 159568864 + MGP_BALBcJ_P0058927 Top1 protein_coding protein_coding MGP_BALBcJ_T0058928.1 MGP_BALBcJ_G0026780.1 mouse_genomes_project 2 159489418 159493546 + Top1 protein_coding processed_transcript MGP_BALBcJ_T0058929.1 MGP_BALBcJ_G0026780.1 mouse_genomes_project 2 159516420 159531268 + Top1 protein_coding retained_intron MGP_BALBcJ_T0058930.1 MGP_BALBcJ_G0026780.1 mouse_genomes_project 2 159531985 159540033 + Top1 protein_coding retained_intron MGP_BALBcJ_T0058931.1 MGP_BALBcJ_G0026780.1 mouse_genomes_project 2 159548275 159549812 + Top1 protein_coding processed_transcript MGP_BALBcJ_T0058932.1 MGP_BALBcJ_G0026780.1 mouse_genomes_project 2 159563586 159567484 + Top1 protein_coding retained_intron MGP_BALBcJ_T0057159.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119404586 119406930 + MGP_BALBcJ_P0057159 Ckmt1 protein_coding protein_coding MGP_BALBcJ_T0057160.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119404648 119410604 + MGP_BALBcJ_P0057160 Ckmt1 protein_coding protein_coding MGP_BALBcJ_T0057161.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119404712 119406667 + MGP_BALBcJ_P0057161 Ckmt1 protein_coding protein_coding MGP_BALBcJ_T0057162.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119404779 119407858 + MGP_BALBcJ_P0057162 Ckmt1 protein_coding protein_coding MGP_BALBcJ_T0057163.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119405484 119410604 + MGP_BALBcJ_P0057163 Ckmt1 protein_coding protein_coding MGP_BALBcJ_T0057164.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119405530 119407855 + MGP_BALBcJ_P0057164 Ckmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057165.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119405533 119407251 + Ckmt1 protein_coding retained_intron MGP_BALBcJ_T0057166.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119405540 119407497 + MGP_BALBcJ_P0057166 Ckmt1 protein_coding protein_coding MGP_BALBcJ_T0057167.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119405718 119406909 + MGP_BALBcJ_P0057167 Ckmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057168.1 MGP_BALBcJ_G0026362.1 mouse_genomes_project 2 119409788 119410603 + Ckmt1 protein_coding retained_intron MGP_BALBcJ_T0056474.1 MGP_BALBcJ_G0026190.1 mouse_genomes_project 2 102655595 102657872 - MGP_BALBcJ_P0056474 Pin1rt1 protein_coding protein_coding MGP_BALBcJ_T0057228.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048135 120106352 + MGP_BALBcJ_P0057228 Ctdspl2 protein_coding protein_coding MGP_BALBcJ_T0057229.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048550 120105101 + MGP_BALBcJ_P0057229 Ctdspl2 protein_coding protein_coding MGP_BALBcJ_T0057230.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048599 120086830 + Ctdspl2 protein_coding retained_intron MGP_BALBcJ_T0057231.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048619 120105325 + Ctdspl2 protein_coding processed_transcript MGP_BALBcJ_T0057232.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048625 120086424 + Ctdspl2 protein_coding processed_transcript MGP_BALBcJ_T0057233.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048625 120082825 + Ctdspl2 protein_coding retained_intron MGP_BALBcJ_T0057234.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120048798 120103440 + MGP_BALBcJ_P0057234 Ctdspl2 protein_coding protein_coding MGP_BALBcJ_T0057235.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120061509 120106301 + MGP_BALBcJ_P0057235 Ctdspl2 protein_coding protein_coding MGP_BALBcJ_T0057236.1 MGP_BALBcJ_G0026375.1 mouse_genomes_project 2 120070869 120096490 + Ctdspl2 protein_coding retained_intron MGP_BALBcJ_T0055844.1 MGP_BALBcJ_G0026045.1 mouse_genomes_project 2 86768870 86769806 + MGP_BALBcJ_P0055844 Olfr1212 protein_coding protein_coding MGP_BALBcJ_T0058272.1 MGP_BALBcJ_G0026638.1 mouse_genomes_project 2 151082554 151087050 - MGP_BALBcJ_P0058272 Defb22 protein_coding protein_coding MGP_BALBcJ_T0053741.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27474530 27490760 + MGP_BALBcJ_P0053741 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053742.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27474856 27490761 + MGP_BALBcJ_P0053742 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053743.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475048 27490760 + MGP_BALBcJ_P0053743 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053744.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475062 27489678 + MGP_BALBcJ_P0053744 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053745.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475146 27488857 + MGP_BALBcJ_P0053745 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053746.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475176 27490749 + MGP_BALBcJ_P0053746 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053747.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475178 27488138 + Phyhd1 protein_coding processed_transcript MGP_BALBcJ_T0053748.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475183 27489726 + MGP_BALBcJ_P0053748 Phyhd1 protein_coding protein_coding MGP_BALBcJ_T0053749.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475190 27490710 + MGP_BALBcJ_P0053749 Phyhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053750.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27475190 27490710 + MGP_BALBcJ_P0053750 Phyhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053751.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27485614 27490752 + MGP_BALBcJ_P0053751 Phyhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053752.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27488242 27490466 + Phyhd1 protein_coding retained_intron MGP_BALBcJ_T0053753.1 MGP_BALBcJ_G0025535.1 mouse_genomes_project 2 27488289 27489122 + Phyhd1 protein_coding retained_intron MGP_BALBcJ_T0003928.1 MGP_BALBcJ_G0003507.1 mouse_genomes_project 2 28455893 28457771 - Gm13405 antisense antisense MGP_BALBcJ_T0004033.1 MGP_BALBcJ_G0003581.1 mouse_genomes_project 2 103494600 103625608 - Pax6os1 antisense antisense MGP_BALBcJ_T0004034.1 MGP_BALBcJ_G0003581.1 mouse_genomes_project 2 103495440 103625558 - Pax6os1 antisense antisense MGP_BALBcJ_T0013606.1 MGP_BALBcJ_G0011703.1 mouse_genomes_project 2 80230914 80231254 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013678.1 MGP_BALBcJ_G0011775.1 mouse_genomes_project 2 104883417 104883885 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099689.1 MGP_BALBcJ_G0037725.1 mouse_genomes_project 2 108147615 108147722 + Gm22997 snRNA snRNA MGP_BALBcJ_T0013652.1 MGP_BALBcJ_G0011749.1 mouse_genomes_project 2 94893709 94895110 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007312.1 MGP_BALBcJ_G0005991.1 mouse_genomes_project 2 131933176 131935843 + Gm14100 lincRNA lincRNA MGP_BALBcJ_T0017757.1 MGP_BALBcJ_G0015374.1 mouse_genomes_project 2 84511572 84512892 - Gm13723 processed_transcript processed_transcript MGP_BALBcJ_T0052413.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3521768 4386977 - MGP_BALBcJ_P0052413 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052414.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3521779 3869187 - MGP_BALBcJ_P0052414 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052415.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3521779 3869187 - MGP_BALBcJ_P0052415 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052416.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3521779 3709517 - MGP_BALBcJ_P0052416 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052417.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3523936 3869187 - MGP_BALBcJ_P0052417 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052418.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3525494 4068910 - MGP_BALBcJ_P0052418 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052419.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3526872 3869138 - MGP_BALBcJ_P0052419 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052420.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3526906 3709517 - MGP_BALBcJ_P0052420 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052421.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3526906 4068850 - MGP_BALBcJ_P0052421 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052422.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3527700 3709830 - MGP_BALBcJ_P0052422 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052423.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3528305 3709515 - MGP_BALBcJ_P0052423 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052424.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3528305 3709515 - MGP_BALBcJ_P0052424 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052425.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3528399 3869137 - MGP_BALBcJ_P0052425 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052426.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3529277 3856790 - MGP_BALBcJ_P0052426 Celf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052427.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3529290 3576801 - Celf2 protein_coding processed_transcript MGP_BALBcJ_T0052428.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3536307 4386870 - MGP_BALBcJ_P0052428 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052429.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3568042 3709517 - Celf2 protein_coding retained_intron MGP_BALBcJ_T0052430.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3588208 3600218 - Celf2 protein_coding processed_transcript MGP_BALBcJ_T0052431.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3591802 3868819 - Celf2 protein_coding processed_transcript MGP_BALBcJ_T0052432.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3599766 4387175 - MGP_BALBcJ_P0052432 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052433.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3604276 3869083 - Celf2 protein_coding retained_intron MGP_BALBcJ_T0052434.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3607565 3710118 - Celf2 protein_coding retained_intron MGP_BALBcJ_T0052435.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3608741 3856165 - MGP_BALBcJ_P0052435 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052436.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3644970 3869083 - Celf2 protein_coding retained_intron MGP_BALBcJ_T0052437.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3648680 4068815 - MGP_BALBcJ_P0052437 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052438.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 3709357 3710111 - MGP_BALBcJ_P0052438 Celf2 protein_coding protein_coding MGP_BALBcJ_T0052439.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 4064690 4068921 - Celf2 protein_coding processed_transcript MGP_BALBcJ_T0052440.1 MGP_BALBcJ_G0025305.1 mouse_genomes_project 2 4385052 4485158 - Celf2 protein_coding processed_transcript MGP_BALBcJ_T0100992.1 MGP_BALBcJ_G0039028.1 mouse_genomes_project 2 149758692 149758828 + snoRNA snoRNA MGP_BALBcJ_T0003879.1 MGP_BALBcJ_G0003470.1 mouse_genomes_project 2 3868460 3871668 + Gm13389 antisense antisense MGP_BALBcJ_T0055773.1 MGP_BALBcJ_G0025983.1 mouse_genomes_project 2 85212677 85215346 + Pramel6 protein_coding processed_transcript MGP_BALBcJ_T0055774.1 MGP_BALBcJ_G0025983.1 mouse_genomes_project 2 85212677 85215337 + Pramel6 protein_coding processed_transcript MGP_BALBcJ_T0055775.1 MGP_BALBcJ_G0025983.1 mouse_genomes_project 2 85212695 85215517 + Pramel6 protein_coding processed_transcript MGP_BALBcJ_T0055776.1 MGP_BALBcJ_G0025983.1 mouse_genomes_project 2 85213539 85215430 + Pramel6 protein_coding processed_transcript MGP_BALBcJ_T0055777.1 MGP_BALBcJ_G0025983.1 mouse_genomes_project 2 85213539 85216990 + MGP_BALBcJ_P0055777 Pramel6 protein_coding protein_coding MGP_BALBcJ_T0055778.1 MGP_BALBcJ_G0025983.1 mouse_genomes_project 2 85214572 85216983 + MGP_BALBcJ_P0055778 Pramel6 protein_coding protein_coding MGP_BALBcJ_T0013510.1 MGP_BALBcJ_G0011607.1 mouse_genomes_project 2 47977591 47978455 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056815.1 MGP_BALBcJ_G0026303.1 mouse_genomes_project 2 117071578 117076549 + MGP_BALBcJ_P0056815 Rpusd2 protein_coding protein_coding MGP_BALBcJ_T0010461.1 MGP_BALBcJ_G0008586.1 mouse_genomes_project 2 163240714 163240785 - Mir7678 miRNA miRNA MGP_BALBcJ_T0053964.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29210183 29233744 + MGP_BALBcJ_P0053964 Aif1l protein_coding protein_coding MGP_BALBcJ_T0053965.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29210318 29230049 + MGP_BALBcJ_P0053965 Aif1l protein_coding protein_coding MGP_BALBcJ_T0053966.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29210378 29231534 + MGP_BALBcJ_P0053966 Aif1l protein_coding protein_coding MGP_BALBcJ_T0053967.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29210507 29230052 + Aif1l protein_coding retained_intron MGP_BALBcJ_T0053968.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29210561 29231640 + Aif1l protein_coding retained_intron MGP_BALBcJ_T0053969.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29220376 29231326 + Aif1l protein_coding processed_transcript MGP_BALBcJ_T0053970.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29221357 29230048 + Aif1l protein_coding processed_transcript MGP_BALBcJ_T0053971.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29221947 29231250 + Aif1l protein_coding retained_intron MGP_BALBcJ_T0053972.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29223297 29231297 + Aif1l protein_coding processed_transcript MGP_BALBcJ_T0053973.1 MGP_BALBcJ_G0025567.1 mouse_genomes_project 2 29229621 29231457 + Aif1l protein_coding retained_intron MGP_BALBcJ_T0055916.1 MGP_BALBcJ_G0026097.1 mouse_genomes_project 2 88075473 88078459 + MGP_BALBcJ_P0055916 protein_coding protein_coding MGP_BALBcJ_T0055918.1 MGP_BALBcJ_G0026097.1 mouse_genomes_project 2 88077422 88082511 + MGP_BALBcJ_P0055918 protein_coding protein_coding MGP_BALBcJ_T0054327.1 MGP_BALBcJ_G0025618.1 mouse_genomes_project 2 32177884 32186295 + Cutal protein_coding retained_intron MGP_BALBcJ_T0054328.1 MGP_BALBcJ_G0025618.1 mouse_genomes_project 2 32177951 32194134 + MGP_BALBcJ_P0054328 Cutal protein_coding protein_coding MGP_BALBcJ_T0013835.1 MGP_BALBcJ_G0011932.1 mouse_genomes_project 2 161751522 161752152 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013420.1 MGP_BALBcJ_G0011517.1 mouse_genomes_project 2 15068024 15068289 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052858.1 MGP_BALBcJ_G0025380.1 mouse_genomes_project 2 21347096 21349721 + MGP_BALBcJ_P0052858 Il1f10 protein_coding protein_coding MGP_BALBcJ_T0056099.1 MGP_BALBcJ_G0026123.1 mouse_genomes_project 2 89447283 89453364 - MGP_BALBcJ_P0056099 Zfp408 protein_coding protein_coding MGP_BALBcJ_T0056100.1 MGP_BALBcJ_G0026123.1 mouse_genomes_project 2 89447303 89453376 - MGP_BALBcJ_P0056100 Zfp408 protein_coding protein_coding MGP_BALBcJ_T0056101.1 MGP_BALBcJ_G0026123.1 mouse_genomes_project 2 89449905 89451863 - Zfp408 protein_coding retained_intron MGP_BALBcJ_T0056102.1 MGP_BALBcJ_G0026123.1 mouse_genomes_project 2 89451295 89453344 - MGP_BALBcJ_P0056102 Zfp408 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056103.1 MGP_BALBcJ_G0026123.1 mouse_genomes_project 2 89451643 89453328 - Zfp408 protein_coding processed_transcript MGP_BALBcJ_T0056104.1 MGP_BALBcJ_G0026123.1 mouse_genomes_project 2 89452520 89453345 - Zfp408 protein_coding processed_transcript MGP_BALBcJ_T0059065.1 MGP_BALBcJ_G0026815.1 mouse_genomes_project 2 163066065 163067333 - MGP_BALBcJ_P0059065 Wfdc15a protein_coding protein_coding MGP_BALBcJ_T0098717.1 MGP_BALBcJ_G0036771.1 mouse_genomes_project 2 129848725 129849027 - Gm22902 ribozyme ribozyme MGP_BALBcJ_T0057329.1 MGP_BALBcJ_G0026402.1 mouse_genomes_project 2 123490331 123501125 + MGP_BALBcJ_P0057329 Dut protein_coding protein_coding MGP_BALBcJ_T0057330.1 MGP_BALBcJ_G0026402.1 mouse_genomes_project 2 123490623 123501985 + MGP_BALBcJ_P0057330 Dut protein_coding protein_coding MGP_BALBcJ_T0057331.1 MGP_BALBcJ_G0026402.1 mouse_genomes_project 2 123491041 123492155 + Dut protein_coding processed_transcript MGP_BALBcJ_T0057897.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 134966248 134979854 + protein_coding processed_transcript MGP_BALBcJ_T0057898.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 134966293 134971086 + protein_coding processed_transcript MGP_BALBcJ_T0057899.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 134966329 135019508 + MGP_BALBcJ_P0057899 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057900.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 134966519 134978553 + protein_coding processed_transcript MGP_BALBcJ_T0057901.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 134979857 135018206 + MGP_BALBcJ_P0057901 protein_coding protein_coding MGP_BALBcJ_T0057902.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 135000149 135024772 + MGP_BALBcJ_P0057902 protein_coding unknown_likely_coding MGP_BALBcJ_T0057903.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 135021862 135022658 + protein_coding processed_transcript MGP_BALBcJ_T0057904.1 MGP_BALBcJ_G0026534.1 mouse_genomes_project 2 135021877 135024832 + protein_coding processed_transcript MGP_BALBcJ_T0013518.1 MGP_BALBcJ_G0011615.1 mouse_genomes_project 2 49791709 49793043 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013602.1 MGP_BALBcJ_G0011699.1 mouse_genomes_project 2 78516715 78517330 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055816.1 MGP_BALBcJ_G0026018.1 mouse_genomes_project 2 85913311 85914250 + MGP_BALBcJ_P0055816 Olfr1168 protein_coding protein_coding MGP_BALBcJ_T0001018.1 MGP_BALBcJ_G0000946.1 mouse_genomes_project 2 8020370 8020481 - TEC TEC MGP_BALBcJ_T0007286.1 MGP_BALBcJ_G0005970.1 mouse_genomes_project 2 115432144 115435470 - Gm13982 lincRNA lincRNA MGP_BALBcJ_T0007221.1 MGP_BALBcJ_G0005919.1 mouse_genomes_project 2 73033075 73038900 - Gm13660 lincRNA lincRNA MGP_BALBcJ_T0010402.1 MGP_BALBcJ_G0008527.1 mouse_genomes_project 2 65247467 65247565 + Mir6335 miRNA miRNA MGP_BALBcJ_T0056616.1 MGP_BALBcJ_G0026236.1 mouse_genomes_project 2 109452078 109452821 - MGP_BALBcJ_P0056616 Olfr1290 protein_coding protein_coding MGP_BALBcJ_T0013716.1 MGP_BALBcJ_G0011813.1 mouse_genomes_project 2 119452106 119452339 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013755.1 MGP_BALBcJ_G0011852.1 mouse_genomes_project 2 138354198 138354626 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057244.1 MGP_BALBcJ_G0026380.1 mouse_genomes_project 2 120248515 120253906 + MGP_BALBcJ_P0057244 B2m protein_coding protein_coding MGP_BALBcJ_T0011503.1 MGP_BALBcJ_G0009628.1 mouse_genomes_project 2 166015920 166016109 + Gm27494 misc_RNA misc_RNA MGP_BALBcJ_T0003978.1 MGP_BALBcJ_G0003547.1 mouse_genomes_project 2 64962078 64987534 - Gm13601 antisense antisense MGP_BALBcJ_T0054703.1 MGP_BALBcJ_G0025699.1 mouse_genomes_project 2 49049319 49050217 + MGP_BALBcJ_P0054703 Tas2r134 protein_coding protein_coding MGP_BALBcJ_T0055305.1 MGP_BALBcJ_G0025811.1 mouse_genomes_project 2 71136629 71154585 - MGP_BALBcJ_P0055305 Chrna1 protein_coding protein_coding MGP_BALBcJ_T0003989.1 MGP_BALBcJ_G0003554.1 mouse_genomes_project 2 69762963 69770570 - Rapgef4os2 antisense antisense MGP_BALBcJ_T0057667.1 MGP_BALBcJ_G0026490.1 mouse_genomes_project 2 129062476 129076370 + MGP_BALBcJ_P0057667 Itpa protein_coding protein_coding MGP_BALBcJ_T0057668.1 MGP_BALBcJ_G0026490.1 mouse_genomes_project 2 129062671 129070770 + Itpa protein_coding retained_intron MGP_BALBcJ_T0057669.1 MGP_BALBcJ_G0026490.1 mouse_genomes_project 2 129062674 129070477 + Itpa protein_coding processed_transcript MGP_BALBcJ_T0057670.1 MGP_BALBcJ_G0026490.1 mouse_genomes_project 2 129062692 129067070 + Itpa protein_coding retained_intron MGP_BALBcJ_T0057671.1 MGP_BALBcJ_G0026490.1 mouse_genomes_project 2 129062731 129075791 + Itpa protein_coding processed_transcript MGP_BALBcJ_T0007282.1 MGP_BALBcJ_G0005968.1 mouse_genomes_project 2 114903459 114916863 + D330050G23Rik lincRNA lincRNA MGP_BALBcJ_T0007283.1 MGP_BALBcJ_G0005968.1 mouse_genomes_project 2 114903482 114916700 + D330050G23Rik lincRNA lincRNA MGP_BALBcJ_T0007284.1 MGP_BALBcJ_G0005968.1 mouse_genomes_project 2 114903501 114908055 + D330050G23Rik lincRNA lincRNA MGP_BALBcJ_T0100968.1 MGP_BALBcJ_G0039004.1 mouse_genomes_project 2 102521234 102521366 + Gm22439 snoRNA snoRNA MGP_BALBcJ_T0007402.1 MGP_BALBcJ_G0006067.1 mouse_genomes_project 2 171069657 171081416 - lincRNA lincRNA MGP_BALBcJ_T0055797.1 MGP_BALBcJ_G0026000.1 mouse_genomes_project 2 85523591 85524536 + MGP_BALBcJ_P0055797 Olfr1143 protein_coding protein_coding MGP_BALBcJ_T0053598.1 MGP_BALBcJ_G0025513.1 mouse_genomes_project 2 26820995 26941552 + MGP_BALBcJ_P0053598 Rapgef1 protein_coding protein_coding MGP_BALBcJ_T0053599.1 MGP_BALBcJ_G0025513.1 mouse_genomes_project 2 26821337 26939516 + MGP_BALBcJ_P0053599 Rapgef1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053600.1 MGP_BALBcJ_G0025513.1 mouse_genomes_project 2 26866652 26941551 + MGP_BALBcJ_P0053600 Rapgef1 protein_coding protein_coding MGP_BALBcJ_T0053601.1 MGP_BALBcJ_G0025513.1 mouse_genomes_project 2 26931602 26937037 + Rapgef1 protein_coding processed_transcript MGP_BALBcJ_T0053602.1 MGP_BALBcJ_G0025513.1 mouse_genomes_project 2 26933381 26935046 + Rapgef1 protein_coding retained_intron MGP_BALBcJ_T0056008.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88969647 - MGP_BALBcJ_P0056008 Madd protein_coding protein_coding MGP_BALBcJ_T0056009.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88969653 - MGP_BALBcJ_P0056009 Madd protein_coding protein_coding MGP_BALBcJ_T0056010.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88969649 - MGP_BALBcJ_P0056010 Madd protein_coding protein_coding MGP_BALBcJ_T0056011.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88974110 - MGP_BALBcJ_P0056011 Madd protein_coding protein_coding MGP_BALBcJ_T0056012.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88969658 - MGP_BALBcJ_P0056012 Madd protein_coding protein_coding MGP_BALBcJ_T0056013.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88973232 - MGP_BALBcJ_P0056013 Madd protein_coding protein_coding MGP_BALBcJ_T0056014.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88974110 - MGP_BALBcJ_P0056014 Madd protein_coding protein_coding MGP_BALBcJ_T0056015.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88974110 - MGP_BALBcJ_P0056015 Madd protein_coding protein_coding MGP_BALBcJ_T0056016.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88973191 - MGP_BALBcJ_P0056016 Madd protein_coding protein_coding MGP_BALBcJ_T0056017.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88974110 - MGP_BALBcJ_P0056017 Madd protein_coding protein_coding MGP_BALBcJ_T0056018.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88974110 - MGP_BALBcJ_P0056018 Madd protein_coding protein_coding MGP_BALBcJ_T0056019.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925630 88973231 - MGP_BALBcJ_P0056019 Madd protein_coding protein_coding MGP_BALBcJ_T0056020.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925631 88974110 - Madd protein_coding processed_transcript MGP_BALBcJ_T0056021.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925631 88974110 - Madd protein_coding processed_transcript MGP_BALBcJ_T0056022.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925631 88974110 - Madd protein_coding processed_transcript MGP_BALBcJ_T0056023.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925631 88974110 - Madd protein_coding processed_transcript MGP_BALBcJ_T0056024.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925631 88974110 - Madd protein_coding processed_transcript MGP_BALBcJ_T0056025.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88925631 88974110 - MGP_BALBcJ_P0056025 Madd protein_coding protein_coding MGP_BALBcJ_T0056026.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88926606 88927513 - Madd protein_coding retained_intron MGP_BALBcJ_T0056027.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88931313 88943575 - Madd protein_coding retained_intron MGP_BALBcJ_T0056028.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88931542 88941112 - Madd protein_coding retained_intron MGP_BALBcJ_T0056029.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88940767 88943419 - Madd protein_coding retained_intron MGP_BALBcJ_T0056030.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88944181 88948959 - Madd protein_coding retained_intron MGP_BALBcJ_T0056031.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88949647 88973369 - Madd protein_coding retained_intron MGP_BALBcJ_T0056032.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88949994 88973390 - MGP_BALBcJ_P0056032 Madd protein_coding protein_coding MGP_BALBcJ_T0056033.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88956402 88964549 - MGP_BALBcJ_P0056033 Madd protein_coding protein_coding MGP_BALBcJ_T0056034.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88967175 88974129 - Madd protein_coding retained_intron MGP_BALBcJ_T0056035.1 MGP_BALBcJ_G0026113.1 mouse_genomes_project 2 88967986 88973382 - Madd protein_coding processed_transcript MGP_BALBcJ_T0057054.1 MGP_BALBcJ_G0026348.1 mouse_genomes_project 2 118790370 118893956 - MGP_BALBcJ_P0057054 Ttbk2 protein_coding protein_coding MGP_BALBcJ_T0057055.1 MGP_BALBcJ_G0026348.1 mouse_genomes_project 2 118790370 118893770 - MGP_BALBcJ_P0057055 Ttbk2 protein_coding protein_coding MGP_BALBcJ_T0057056.1 MGP_BALBcJ_G0026348.1 mouse_genomes_project 2 118790370 118893758 - MGP_BALBcJ_P0057056 Ttbk2 protein_coding protein_coding MGP_BALBcJ_T0057057.1 MGP_BALBcJ_G0026348.1 mouse_genomes_project 2 118803215 118893742 - MGP_BALBcJ_P0057057 Ttbk2 protein_coding protein_coding MGP_BALBcJ_T0057058.1 MGP_BALBcJ_G0026348.1 mouse_genomes_project 2 118808427 118893716 - MGP_BALBcJ_P0057058 Ttbk2 protein_coding protein_coding MGP_BALBcJ_T0057059.1 MGP_BALBcJ_G0026348.1 mouse_genomes_project 2 118847175 118893787 - Ttbk2 protein_coding processed_transcript MGP_BALBcJ_T0055863.1 MGP_BALBcJ_G0026061.1 mouse_genomes_project 2 87038900 87039872 - MGP_BALBcJ_P0055863 Olfr1228 protein_coding protein_coding MGP_BALBcJ_T0013475.1 MGP_BALBcJ_G0011572.1 mouse_genomes_project 2 34485862 34486885 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102393.1 MGP_BALBcJ_G0040209.1 mouse_genomes_project 2 34400935 34401189 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0059019.1 MGP_BALBcJ_G0026799.1 mouse_genomes_project 2 162364953 162375274 + MGP_BALBcJ_P0059019 R3hdml protein_coding protein_coding MGP_BALBcJ_T0004109.1 MGP_BALBcJ_G0003636.1 mouse_genomes_project 2 150539243 150542612 - Gm14154 antisense antisense MGP_BALBcJ_T0054486.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34723373 34775687 + MGP_BALBcJ_P0054486 Rabgap1 protein_coding protein_coding MGP_BALBcJ_T0054487.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34723379 34847157 + MGP_BALBcJ_P0054487 Rabgap1 protein_coding protein_coding MGP_BALBcJ_T0054488.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34723390 34768453 + Rabgap1 protein_coding retained_intron MGP_BALBcJ_T0054489.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34731730 34733883 + Rabgap1 protein_coding processed_transcript MGP_BALBcJ_T0054490.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34732339 34755653 + MGP_BALBcJ_P0054490 Rabgap1 protein_coding protein_coding MGP_BALBcJ_T0054491.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34732339 34825529 + MGP_BALBcJ_P0054491 Rabgap1 protein_coding protein_coding MGP_BALBcJ_T0054492.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34732361 34847174 + MGP_BALBcJ_P0054492 Rabgap1 protein_coding protein_coding MGP_BALBcJ_T0054494.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34770972 34774044 + Rabgap1 protein_coding retained_intron MGP_BALBcJ_T0054495.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34772028 34789721 + Rabgap1 protein_coding processed_transcript MGP_BALBcJ_T0054497.1 MGP_BALBcJ_G0025668.1 mouse_genomes_project 2 34797101 34845773 + Rabgap1 protein_coding processed_transcript MGP_BALBcJ_T0001097.1 MGP_BALBcJ_G0001024.1 mouse_genomes_project 2 168658106 168662369 - TEC TEC MGP_BALBcJ_T0059123.1 MGP_BALBcJ_G0026839.1 mouse_genomes_project 2 163545065 163552023 - MGP_BALBcJ_P0059123 Wfdc9 protein_coding protein_coding MGP_BALBcJ_T0059124.1 MGP_BALBcJ_G0026839.1 mouse_genomes_project 2 163545221 163547198 - MGP_BALBcJ_P0059124 Wfdc9 protein_coding protein_coding MGP_BALBcJ_T0054784.1 MGP_BALBcJ_G0025716.1 mouse_genomes_project 2 55428099 55474206 + MGP_BALBcJ_P0054784 Galnt5 protein_coding protein_coding MGP_BALBcJ_T0054785.1 MGP_BALBcJ_G0025716.1 mouse_genomes_project 2 55428099 55468244 + MGP_BALBcJ_P0054785 Galnt5 protein_coding protein_coding MGP_BALBcJ_T0054869.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57588740 57628412 + MGP_BALBcJ_P0054869 March7 protein_coding protein_coding MGP_BALBcJ_T0054870.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57588766 57629877 + March7 protein_coding processed_transcript MGP_BALBcJ_T0054871.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57588926 57627174 + MGP_BALBcJ_P0054871 March7 protein_coding protein_coding MGP_BALBcJ_T0054872.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57603952 57627158 + MGP_BALBcJ_P0054872 March7 protein_coding protein_coding MGP_BALBcJ_T0054873.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57611282 57613592 + March7 protein_coding processed_transcript MGP_BALBcJ_T0054874.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57615955 57627158 + MGP_BALBcJ_P0054874 March7 protein_coding protein_coding MGP_BALBcJ_T0054875.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57616089 57622337 + March7 protein_coding processed_transcript MGP_BALBcJ_T0054876.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57622270 57627156 + March7 protein_coding processed_transcript MGP_BALBcJ_T0054877.1 MGP_BALBcJ_G0025730.1 mouse_genomes_project 2 57626543 57627158 + March7 protein_coding processed_transcript MGP_BALBcJ_T0099684.1 MGP_BALBcJ_G0037720.1 mouse_genomes_project 2 78582364 78582471 - Gm23452 snRNA snRNA MGP_BALBcJ_T0053554.1 MGP_BALBcJ_G0025506.1 mouse_genomes_project 2 26018460 26025559 + Ddx31 protein_coding processed_transcript MGP_BALBcJ_T0053555.1 MGP_BALBcJ_G0025506.1 mouse_genomes_project 2 26018513 26084825 + MGP_BALBcJ_P0053555 Ddx31 protein_coding protein_coding MGP_BALBcJ_T0053556.1 MGP_BALBcJ_G0025506.1 mouse_genomes_project 2 26022949 26034275 + Ddx31 protein_coding processed_transcript MGP_BALBcJ_T0053557.1 MGP_BALBcJ_G0025506.1 mouse_genomes_project 2 26035184 26038121 + Ddx31 protein_coding processed_transcript MGP_BALBcJ_T0102431.1 MGP_BALBcJ_G0040247.1 mouse_genomes_project 2 88077447 88082443 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0057750.1 MGP_BALBcJ_G0026504.1 mouse_genomes_project 2 129667301 129682966 + MGP_BALBcJ_P0057750 Mavs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057751.1 MGP_BALBcJ_G0026504.1 mouse_genomes_project 2 129667305 129682969 + MGP_BALBcJ_P0057751 Mavs protein_coding protein_coding MGP_BALBcJ_T0057752.1 MGP_BALBcJ_G0026504.1 mouse_genomes_project 2 129667343 129682969 + MGP_BALBcJ_P0057752 Mavs protein_coding protein_coding MGP_BALBcJ_T0057753.1 MGP_BALBcJ_G0026504.1 mouse_genomes_project 2 129676877 129680609 + Mavs protein_coding processed_transcript MGP_BALBcJ_T0058422.1 MGP_BALBcJ_G0026685.1 mouse_genomes_project 2 152862313 152892340 + MGP_BALBcJ_P0058422 Bpifb1 protein_coding protein_coding MGP_BALBcJ_T0058423.1 MGP_BALBcJ_G0026685.1 mouse_genomes_project 2 152862318 152892313 + Bpifb1 protein_coding retained_intron MGP_BALBcJ_T0058424.1 MGP_BALBcJ_G0026685.1 mouse_genomes_project 2 152871875 152892314 + MGP_BALBcJ_P0058424 Bpifb1 protein_coding protein_coding MGP_BALBcJ_T0099686.1 MGP_BALBcJ_G0037722.1 mouse_genomes_project 2 83425205 83425385 - Gm24037 snRNA snRNA MGP_BALBcJ_T0059938.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181172147 181191725 + MGP_BALBcJ_P0059938 Pcmtd2 protein_coding protein_coding MGP_BALBcJ_T0059939.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181172206 181191710 + MGP_BALBcJ_P0059939 Pcmtd2 protein_coding protein_coding MGP_BALBcJ_T0059940.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181175126 181180901 + MGP_BALBcJ_P0059940 Pcmtd2 protein_coding protein_coding MGP_BALBcJ_T0059941.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181176747 181180955 + Pcmtd2 protein_coding retained_intron MGP_BALBcJ_T0059942.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181178743 181189602 + MGP_BALBcJ_P0059942 Pcmtd2 protein_coding protein_coding MGP_BALBcJ_T0059943.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181185219 181189866 + Pcmtd2 protein_coding processed_transcript MGP_BALBcJ_T0059944.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181185227 181189741 + Pcmtd2 protein_coding processed_transcript MGP_BALBcJ_T0059945.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181185261 181189519 + Pcmtd2 protein_coding processed_transcript MGP_BALBcJ_T0059946.1 MGP_BALBcJ_G0027012.1 mouse_genomes_project 2 181185824 181189769 + Pcmtd2 protein_coding retained_intron MGP_BALBcJ_T0013403.1 MGP_BALBcJ_G0011500.1 mouse_genomes_project 2 8107280 8108706 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001031.1 MGP_BALBcJ_G0000959.1 mouse_genomes_project 2 10076248 10078850 + TEC TEC MGP_BALBcJ_T0057324.1 MGP_BALBcJ_G0026401.1 mouse_genomes_project 2 123390946 123472553 + MGP_BALBcJ_P0057324 Slc12a1 protein_coding protein_coding MGP_BALBcJ_T0057325.1 MGP_BALBcJ_G0026401.1 mouse_genomes_project 2 123391021 123405473 + Slc12a1 protein_coding retained_intron MGP_BALBcJ_T0057326.1 MGP_BALBcJ_G0026401.1 mouse_genomes_project 2 123391041 123472550 + MGP_BALBcJ_P0057326 Slc12a1 protein_coding protein_coding MGP_BALBcJ_T0057327.1 MGP_BALBcJ_G0026401.1 mouse_genomes_project 2 123391041 123472553 + MGP_BALBcJ_P0057327 Slc12a1 protein_coding protein_coding MGP_BALBcJ_T0057328.1 MGP_BALBcJ_G0026401.1 mouse_genomes_project 2 123392369 123471413 + MGP_BALBcJ_P0057328 Slc12a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0013731.1 MGP_BALBcJ_G0011828.1 mouse_genomes_project 2 128042677 128043186 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053908.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28398158 28460764 + MGP_BALBcJ_P0053908 Gpr107 protein_coding protein_coding MGP_BALBcJ_T0053909.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28398381 28415109 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0053910.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28398399 28438516 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0053911.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28398399 28401650 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0053912.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28418219 28430941 + Gpr107 protein_coding processed_transcript MGP_BALBcJ_T0053913.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28431366 28455582 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0053914.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28431696 28435153 + Gpr107 protein_coding processed_transcript MGP_BALBcJ_T0053915.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28435171 28455764 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0053916.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28443319 28454131 + Gpr107 protein_coding processed_transcript MGP_BALBcJ_T0053917.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28453055 28456486 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0053918.1 MGP_BALBcJ_G0025556.1 mouse_genomes_project 2 28456523 28460990 + Gpr107 protein_coding retained_intron MGP_BALBcJ_T0057240.1 MGP_BALBcJ_G0026378.1 mouse_genomes_project 2 120148620 120215590 - MGP_BALBcJ_P0057240 Spg11 protein_coding protein_coding MGP_BALBcJ_T0057241.1 MGP_BALBcJ_G0026378.1 mouse_genomes_project 2 120190143 120215500 - Spg11 protein_coding processed_transcript MGP_BALBcJ_T0057242.1 MGP_BALBcJ_G0026378.1 mouse_genomes_project 2 120204533 120215579 - Spg11 protein_coding processed_transcript MGP_BALBcJ_T0053992.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29414543 29499436 + MGP_BALBcJ_P0053992 Prrc2b protein_coding protein_coding MGP_BALBcJ_T0053993.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29415338 29499421 + MGP_BALBcJ_P0053993 Prrc2b protein_coding protein_coding MGP_BALBcJ_T0053994.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29447379 29496061 + MGP_BALBcJ_P0053994 Prrc2b protein_coding protein_coding MGP_BALBcJ_T0053995.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29471004 29484280 + Prrc2b protein_coding processed_transcript MGP_BALBcJ_T0053996.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29476819 29483939 + MGP_BALBcJ_P0053996 Prrc2b protein_coding protein_coding MGP_BALBcJ_T0053997.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29480699 29484234 + MGP_BALBcJ_P0053997 Prrc2b protein_coding protein_coding MGP_BALBcJ_T0053998.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29481833 29483778 + Prrc2b protein_coding processed_transcript MGP_BALBcJ_T0053999.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29481901 29485989 + Prrc2b protein_coding processed_transcript MGP_BALBcJ_T0054000.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29484151 29486941 + Prrc2b protein_coding processed_transcript MGP_BALBcJ_T0054001.1 MGP_BALBcJ_G0025571.1 mouse_genomes_project 2 29484389 29486057 + Prrc2b protein_coding processed_transcript MGP_BALBcJ_T0059596.1 MGP_BALBcJ_G0026949.1 mouse_genomes_project 2 176136808 176138799 - MGP_BALBcJ_P0059596 protein_coding protein_coding MGP_BALBcJ_T0013627.1 MGP_BALBcJ_G0011724.1 mouse_genomes_project 2 85223027 85223437 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059501.1 MGP_BALBcJ_G0026924.1 mouse_genomes_project 2 171647238 171655991 + MGP_BALBcJ_P0059501 Tfap2c protein_coding protein_coding MGP_BALBcJ_T0059502.1 MGP_BALBcJ_G0026924.1 mouse_genomes_project 2 171648298 171655976 + Tfap2c protein_coding processed_transcript MGP_BALBcJ_T0059503.1 MGP_BALBcJ_G0026924.1 mouse_genomes_project 2 171648409 171655430 + Tfap2c protein_coding processed_transcript MGP_BALBcJ_T0059504.1 MGP_BALBcJ_G0026924.1 mouse_genomes_project 2 171648427 171655988 + MGP_BALBcJ_P0059504 Tfap2c protein_coding protein_coding MGP_BALBcJ_T0059505.1 MGP_BALBcJ_G0026924.1 mouse_genomes_project 2 171648636 171655988 + MGP_BALBcJ_P0059505 Tfap2c protein_coding protein_coding MGP_BALBcJ_T0059506.1 MGP_BALBcJ_G0026924.1 mouse_genomes_project 2 171649761 171651164 + Tfap2c protein_coding processed_transcript MGP_BALBcJ_T0054802.1 MGP_BALBcJ_G0025721.1 mouse_genomes_project 2 55899564 55900526 + MGP_BALBcJ_P0054802 Gm17409 protein_coding protein_coding MGP_BALBcJ_T0017774.1 MGP_BALBcJ_G0015385.1 mouse_genomes_project 2 90859291 90865135 + 4631405J19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017775.1 MGP_BALBcJ_G0015385.1 mouse_genomes_project 2 90859291 90865135 + 4631405J19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017776.1 MGP_BALBcJ_G0015385.1 mouse_genomes_project 2 90860683 90865162 + 4631405J19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017777.1 MGP_BALBcJ_G0015385.1 mouse_genomes_project 2 90860684 90863432 + 4631405J19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017778.1 MGP_BALBcJ_G0015385.1 mouse_genomes_project 2 90861779 90876435 + 4631405J19Rik processed_transcript processed_transcript MGP_BALBcJ_T0052736.1 MGP_BALBcJ_G0025356.1 mouse_genomes_project 2 16554371 16648098 - MGP_BALBcJ_P0052736 4921504E06Rik protein_coding protein_coding MGP_BALBcJ_T0052737.1 MGP_BALBcJ_G0025356.1 mouse_genomes_project 2 16586367 16648098 - 4921504E06Rik protein_coding retained_intron MGP_BALBcJ_T0058209.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150181385 150223241 - MGP_BALBcJ_P0058209 Snph protein_coding protein_coding MGP_BALBcJ_T0058210.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150181385 150223265 - MGP_BALBcJ_P0058210 Snph protein_coding protein_coding MGP_BALBcJ_T0058211.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150181400 150223259 - MGP_BALBcJ_P0058211 Snph protein_coding protein_coding MGP_BALBcJ_T0058212.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150182561 150223285 - MGP_BALBcJ_P0058212 Snph protein_coding protein_coding MGP_BALBcJ_T0058213.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150187991 150223163 - MGP_BALBcJ_P0058213 Snph protein_coding protein_coding MGP_BALBcJ_T0058214.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150191652 150223218 - Snph protein_coding retained_intron MGP_BALBcJ_T0058215.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150191815 150223232 - MGP_BALBcJ_P0058215 Snph protein_coding protein_coding MGP_BALBcJ_T0058216.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150191832 150223253 - MGP_BALBcJ_P0058216 Snph protein_coding protein_coding MGP_BALBcJ_T0058217.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150192040 150223265 - Snph protein_coding processed_transcript MGP_BALBcJ_T0058218.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150211953 150223259 - Snph protein_coding processed_transcript MGP_BALBcJ_T0058219.1 MGP_BALBcJ_G0026617.1 mouse_genomes_project 2 150222424 150223245 - Snph protein_coding retained_intron MGP_BALBcJ_T0057346.1 MGP_BALBcJ_G0026409.1 mouse_genomes_project 2 124073092 124101970 - MGP_BALBcJ_P0057346 Cops2 protein_coding protein_coding MGP_BALBcJ_T0057347.1 MGP_BALBcJ_G0026409.1 mouse_genomes_project 2 124074387 124101870 - MGP_BALBcJ_P0057347 Cops2 protein_coding protein_coding MGP_BALBcJ_T0057348.1 MGP_BALBcJ_G0026409.1 mouse_genomes_project 2 124074390 124101970 - MGP_BALBcJ_P0057348 Cops2 protein_coding protein_coding MGP_BALBcJ_T0057349.1 MGP_BALBcJ_G0026409.1 mouse_genomes_project 2 124085570 124101827 - Cops2 protein_coding processed_transcript MGP_BALBcJ_T0057350.1 MGP_BALBcJ_G0026409.1 mouse_genomes_project 2 124092584 124101894 - Cops2 protein_coding processed_transcript MGP_BALBcJ_T0059129.1 MGP_BALBcJ_G0026843.1 mouse_genomes_project 2 163594043 163597994 + MGP_BALBcJ_P0059129 Spint4 protein_coding protein_coding MGP_BALBcJ_T0058418.1 MGP_BALBcJ_G0026683.1 mouse_genomes_project 2 152820311 152826627 + MGP_BALBcJ_P0058418 Bpifa1 protein_coding protein_coding MGP_BALBcJ_T0058419.1 MGP_BALBcJ_G0026683.1 mouse_genomes_project 2 152820330 152822573 + Bpifa1 protein_coding processed_transcript MGP_BALBcJ_T0058420.1 MGP_BALBcJ_G0026683.1 mouse_genomes_project 2 152821746 152825144 + Bpifa1 protein_coding processed_transcript MGP_BALBcJ_T0013504.1 MGP_BALBcJ_G0011601.1 mouse_genomes_project 2 46252198 46253169 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007170.1 MGP_BALBcJ_G0005876.1 mouse_genomes_project 2 43055993 43057836 + 1700019E08Rik lincRNA lincRNA MGP_BALBcJ_T0007171.1 MGP_BALBcJ_G0005876.1 mouse_genomes_project 2 43056188 43057456 + 1700019E08Rik lincRNA lincRNA MGP_BALBcJ_T0013804.1 MGP_BALBcJ_G0011901.1 mouse_genomes_project 2 152759076 152764820 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003931.1 MGP_BALBcJ_G0003510.1 mouse_genomes_project 2 29143450 29148934 - Gm13441 antisense antisense MGP_BALBcJ_T0010407.1 MGP_BALBcJ_G0008532.1 mouse_genomes_project 2 73906606 73906720 + Gm44337 miRNA miRNA MGP_BALBcJ_T0013515.1 MGP_BALBcJ_G0011612.1 mouse_genomes_project 2 49027622 49027857 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057672.1 MGP_BALBcJ_G0026491.1 mouse_genomes_project 2 129078840 129083318 - Slc4a11 protein_coding retained_intron MGP_BALBcJ_T0057673.1 MGP_BALBcJ_G0026491.1 mouse_genomes_project 2 129078840 129092558 - MGP_BALBcJ_P0057673 Slc4a11 protein_coding protein_coding MGP_BALBcJ_T0057674.1 MGP_BALBcJ_G0026491.1 mouse_genomes_project 2 129081300 129092508 - Slc4a11 protein_coding retained_intron MGP_BALBcJ_T0057675.1 MGP_BALBcJ_G0026491.1 mouse_genomes_project 2 129085839 129086988 - Slc4a11 protein_coding retained_intron MGP_BALBcJ_T0057676.1 MGP_BALBcJ_G0026491.1 mouse_genomes_project 2 129086554 129092508 - MGP_BALBcJ_P0057676 Slc4a11 protein_coding protein_coding MGP_BALBcJ_T0059537.1 MGP_BALBcJ_G0026934.1 mouse_genomes_project 2 172695852 172705517 - MGP_BALBcJ_P0059537 Ankrd60 protein_coding protein_coding MGP_BALBcJ_T0059538.1 MGP_BALBcJ_G0026934.1 mouse_genomes_project 2 172695890 172705386 - MGP_BALBcJ_P0059538 Ankrd60 protein_coding protein_coding MGP_BALBcJ_T0059539.1 MGP_BALBcJ_G0026934.1 mouse_genomes_project 2 172699564 172705461 - Ankrd60 protein_coding processed_transcript MGP_BALBcJ_T0007211.1 MGP_BALBcJ_G0005911.1 mouse_genomes_project 2 71879274 71888281 - 4930441J16Rik lincRNA lincRNA MGP_BALBcJ_T0100956.1 MGP_BALBcJ_G0038992.1 mouse_genomes_project 2 64889737 64889869 + Gm23328 snoRNA snoRNA MGP_BALBcJ_T0100982.1 MGP_BALBcJ_G0039018.1 mouse_genomes_project 2 128673938 128674008 + Gm23650 snoRNA snoRNA MGP_BALBcJ_T0057479.1 MGP_BALBcJ_G0026438.1 mouse_genomes_project 2 125783028 125797982 - MGP_BALBcJ_P0057479 Prom2 protein_coding protein_coding MGP_BALBcJ_T0057480.1 MGP_BALBcJ_G0026438.1 mouse_genomes_project 2 125783510 125797900 - MGP_BALBcJ_P0057480 Prom2 protein_coding protein_coding MGP_BALBcJ_T0057481.1 MGP_BALBcJ_G0026438.1 mouse_genomes_project 2 125791280 125791712 - Prom2 protein_coding processed_transcript MGP_BALBcJ_T0057482.1 MGP_BALBcJ_G0026438.1 mouse_genomes_project 2 125796753 125797929 - Prom2 protein_coding retained_intron MGP_BALBcJ_T0054595.1 MGP_BALBcJ_G0025686.1 mouse_genomes_project 2 40891497 40899577 + Kynu protein_coding processed_transcript MGP_BALBcJ_T0054596.1 MGP_BALBcJ_G0025686.1 mouse_genomes_project 2 40891497 41016664 + MGP_BALBcJ_P0054596 Kynu protein_coding protein_coding MGP_BALBcJ_T0054597.1 MGP_BALBcJ_G0025686.1 mouse_genomes_project 2 40891510 41014165 + MGP_BALBcJ_P0054597 Kynu protein_coding protein_coding MGP_BALBcJ_T0054598.1 MGP_BALBcJ_G0025686.1 mouse_genomes_project 2 40891522 40971549 + MGP_BALBcJ_P0054598 Kynu protein_coding protein_coding MGP_BALBcJ_T0054599.1 MGP_BALBcJ_G0025686.1 mouse_genomes_project 2 40935482 40942073 + Kynu protein_coding processed_transcript MGP_BALBcJ_T0054600.1 MGP_BALBcJ_G0025686.1 mouse_genomes_project 2 41004590 41015344 + Kynu protein_coding processed_transcript MGP_BALBcJ_T0007307.1 MGP_BALBcJ_G0005987.1 mouse_genomes_project 2 130931492 130949427 - Gm14095 lincRNA lincRNA MGP_BALBcJ_T0007285.1 MGP_BALBcJ_G0005969.1 mouse_genomes_project 2 114978141 114981995 - Gm29340 lincRNA lincRNA MGP_BALBcJ_T0058271.1 MGP_BALBcJ_G0026637.1 mouse_genomes_project 2 151073962 151076834 + MGP_BALBcJ_P0058271 Defb20 protein_coding protein_coding MGP_BALBcJ_T0007323.1 MGP_BALBcJ_G0006001.1 mouse_genomes_project 2 145067396 145070832 + 4933406D12Rik lincRNA lincRNA MGP_BALBcJ_T0013448.1 MGP_BALBcJ_G0011545.1 mouse_genomes_project 2 22662704 22662945 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007361.1 MGP_BALBcJ_G0006033.1 mouse_genomes_project 2 163443054 163452391 + Gm14317 lincRNA lincRNA MGP_BALBcJ_T0055633.1 MGP_BALBcJ_G0025883.1 mouse_genomes_project 2 82331477 82343429 - MGP_BALBcJ_P0055633 Smtnl1 protein_coding protein_coding MGP_BALBcJ_T0059464.1 MGP_BALBcJ_G0026909.1 mouse_genomes_project 2 169148296 169170833 - MGP_BALBcJ_P0059464 Zfp217 protein_coding protein_coding MGP_BALBcJ_T0059465.1 MGP_BALBcJ_G0026909.1 mouse_genomes_project 2 169148299 169182284 - MGP_BALBcJ_P0059465 Zfp217 protein_coding protein_coding MGP_BALBcJ_T0059466.1 MGP_BALBcJ_G0026909.1 mouse_genomes_project 2 169159985 169170833 - Zfp217 protein_coding processed_transcript MGP_BALBcJ_T0059467.1 MGP_BALBcJ_G0026909.1 mouse_genomes_project 2 169160271 169173562 - Zfp217 protein_coding processed_transcript MGP_BALBcJ_T0059468.1 MGP_BALBcJ_G0026909.1 mouse_genomes_project 2 169160371 169188082 - Zfp217 protein_coding processed_transcript MGP_BALBcJ_T0055645.1 MGP_BALBcJ_G0025887.1 mouse_genomes_project 2 82451966 82453220 + MGP_BALBcJ_P0055645 Slc43a3 protein_coding protein_coding MGP_BALBcJ_T0055646.1 MGP_BALBcJ_G0025887.1 mouse_genomes_project 2 82452004 82453717 + MGP_BALBcJ_P0055646 Slc43a3 protein_coding protein_coding MGP_BALBcJ_T0055647.1 MGP_BALBcJ_G0025887.1 mouse_genomes_project 2 82452033 82460341 + MGP_BALBcJ_P0055647 Slc43a3 protein_coding protein_coding MGP_BALBcJ_T0055648.1 MGP_BALBcJ_G0025887.1 mouse_genomes_project 2 82452051 82474108 + MGP_BALBcJ_P0055648 Slc43a3 protein_coding protein_coding MGP_BALBcJ_T0055649.1 MGP_BALBcJ_G0025887.1 mouse_genomes_project 2 82452076 82453067 + Slc43a3 protein_coding processed_transcript MGP_BALBcJ_T0055650.1 MGP_BALBcJ_G0025887.1 mouse_genomes_project 2 82452275 82463889 + Slc43a3 protein_coding retained_intron MGP_BALBcJ_T0058606.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154719410 154752294 + Cep250 protein_coding retained_intron MGP_BALBcJ_T0058607.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154719551 154731054 + MGP_BALBcJ_P0058607 Cep250 protein_coding protein_coding MGP_BALBcJ_T0058608.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154719606 154765187 + MGP_BALBcJ_P0058608 Cep250 protein_coding protein_coding MGP_BALBcJ_T0058610.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154742098 154765183 + Cep250 protein_coding retained_intron MGP_BALBcJ_T0058611.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154745256 154747144 + Cep250 protein_coding retained_intron MGP_BALBcJ_T0058612.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154751563 154755260 + MGP_BALBcJ_P0058612 Cep250 protein_coding protein_coding MGP_BALBcJ_T0058613.1 MGP_BALBcJ_G0026725.1 mouse_genomes_project 2 154751595 154756253 + MGP_BALBcJ_P0058613 Cep250 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000336.1 MGP_BALBcJ_G0000277.1 mouse_genomes_project 2 19588403 19588472 + mt-Ts1 Mt_tRNA Mt_tRNA MGP_BALBcJ_T0007261.1 MGP_BALBcJ_G0005950.1 mouse_genomes_project 2 101838396 101845880 + Gm13881 lincRNA lincRNA MGP_BALBcJ_T0057461.1 MGP_BALBcJ_G0026433.1 mouse_genomes_project 2 125593022 125612027 + MGP_BALBcJ_P0057461 Astl protein_coding protein_coding MGP_BALBcJ_T0057462.1 MGP_BALBcJ_G0026433.1 mouse_genomes_project 2 125596004 125612026 + MGP_BALBcJ_P0057462 Astl protein_coding protein_coding MGP_BALBcJ_T0057463.1 MGP_BALBcJ_G0026433.1 mouse_genomes_project 2 125596018 125612025 + MGP_BALBcJ_P0057463 Astl protein_coding protein_coding MGP_BALBcJ_T0057464.1 MGP_BALBcJ_G0026433.1 mouse_genomes_project 2 125596292 125604543 + MGP_BALBcJ_P0057464 Astl protein_coding protein_coding MGP_BALBcJ_T0053494.1 MGP_BALBcJ_G0025493.1 mouse_genomes_project 2 25620011 25624791 + Ppp1r26 protein_coding processed_transcript MGP_BALBcJ_T0053495.1 MGP_BALBcJ_G0025493.1 mouse_genomes_project 2 25620077 25625115 + Ppp1r26 protein_coding processed_transcript MGP_BALBcJ_T0053496.1 MGP_BALBcJ_G0025493.1 mouse_genomes_project 2 25621156 25624951 + Ppp1r26 protein_coding processed_transcript MGP_BALBcJ_T0053497.1 MGP_BALBcJ_G0025493.1 mouse_genomes_project 2 25621156 25629793 + MGP_BALBcJ_P0053497 Ppp1r26 protein_coding protein_coding MGP_BALBcJ_T0053498.1 MGP_BALBcJ_G0025493.1 mouse_genomes_project 2 25621156 25629790 + MGP_BALBcJ_P0053498 Ppp1r26 protein_coding protein_coding MGP_BALBcJ_T0052838.1 MGP_BALBcJ_G0025372.1 mouse_genomes_project 2 20340677 20427255 + MGP_BALBcJ_P0052838 Nxph2 protein_coding protein_coding MGP_BALBcJ_T0054995.1 MGP_BALBcJ_G0025750.1 mouse_genomes_project 2 62903589 63013913 - MGP_BALBcJ_P0054995 Scn3a protein_coding protein_coding MGP_BALBcJ_T0054996.1 MGP_BALBcJ_G0025750.1 mouse_genomes_project 2 62904734 63014052 - MGP_BALBcJ_P0054996 Scn3a protein_coding protein_coding MGP_BALBcJ_T0054997.1 MGP_BALBcJ_G0025750.1 mouse_genomes_project 2 62939669 62945558 - Scn3a protein_coding processed_transcript MGP_BALBcJ_T0054998.1 MGP_BALBcJ_G0025750.1 mouse_genomes_project 2 62971892 62976537 - MGP_BALBcJ_P0054998 Scn3a protein_coding protein_coding MGP_BALBcJ_T0058577.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154576776 154586272 - MGP_BALBcJ_P0058577 Eif6 protein_coding protein_coding MGP_BALBcJ_T0058578.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154576781 154579419 - Eif6 protein_coding processed_transcript MGP_BALBcJ_T0058579.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154576977 154585783 - MGP_BALBcJ_P0058579 Eif6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058580.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154579775 154585783 - Eif6 protein_coding retained_intron MGP_BALBcJ_T0058581.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154579775 154585783 - MGP_BALBcJ_P0058581 Eif6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058582.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154580717 154586113 - MGP_BALBcJ_P0058582 Eif6 protein_coding protein_coding MGP_BALBcJ_T0058583.1 MGP_BALBcJ_G0026720.1 mouse_genomes_project 2 154584506 154586010 - MGP_BALBcJ_P0058583 Eif6 protein_coding protein_coding MGP_BALBcJ_T0013615.1 MGP_BALBcJ_G0011712.1 mouse_genomes_project 2 83345041 83345237 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013864.1 MGP_BALBcJ_G0011961.1 mouse_genomes_project 2 180608504 180617499 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055282.1 MGP_BALBcJ_G0025807.1 mouse_genomes_project 2 70852119 70884334 - MGP_BALBcJ_P0055282 protein_coding protein_coding MGP_BALBcJ_T0055283.1 MGP_BALBcJ_G0025807.1 mouse_genomes_project 2 70877551 70884199 - protein_coding processed_transcript MGP_BALBcJ_T0059587.1 MGP_BALBcJ_G0026946.1 mouse_genomes_project 2 173601220 173608972 - MGP_BALBcJ_P0059587 Slmo2 protein_coding protein_coding MGP_BALBcJ_T0059588.1 MGP_BALBcJ_G0026946.1 mouse_genomes_project 2 173601825 173609043 - MGP_BALBcJ_P0059588 Slmo2 protein_coding protein_coding MGP_BALBcJ_T0059589.1 MGP_BALBcJ_G0026946.1 mouse_genomes_project 2 173605285 173609000 - Slmo2 protein_coding retained_intron MGP_BALBcJ_T0059590.1 MGP_BALBcJ_G0026946.1 mouse_genomes_project 2 173605494 173609040 - MGP_BALBcJ_P0059590 Slmo2 protein_coding protein_coding MGP_BALBcJ_T0013621.1 MGP_BALBcJ_G0011718.1 mouse_genomes_project 2 84950060 84950595 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017715.1 MGP_BALBcJ_G0015344.1 mouse_genomes_project 2 25047702 25051830 - 2810430I11Rik processed_transcript processed_transcript MGP_BALBcJ_T0010385.1 MGP_BALBcJ_G0008510.1 mouse_genomes_project 2 29925316 29925402 + Mir1954 miRNA miRNA MGP_BALBcJ_T0056230.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91257143 91301944 - MGP_BALBcJ_P0056230 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056231.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91257143 91302035 - MGP_BALBcJ_P0056231 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056232.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91257148 91302479 - MGP_BALBcJ_P0056232 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056233.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91257186 91258319 - Cd82 protein_coding processed_transcript MGP_BALBcJ_T0056234.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91257861 91292211 - MGP_BALBcJ_P0056234 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056235.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91258688 91301919 - MGP_BALBcJ_P0056235 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056236.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91259858 91292215 - MGP_BALBcJ_P0056236 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056237.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91259858 91301445 - MGP_BALBcJ_P0056237 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056238.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91268302 91302673 - MGP_BALBcJ_P0056238 Cd82 protein_coding protein_coding MGP_BALBcJ_T0056239.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91271627 91301976 - Cd82 protein_coding processed_transcript MGP_BALBcJ_T0056240.1 MGP_BALBcJ_G0026145.1 mouse_genomes_project 2 91275531 91302445 - MGP_BALBcJ_P0056240 Cd82 protein_coding protein_coding MGP_BALBcJ_T0058722.1 MGP_BALBcJ_G0026738.1 mouse_genomes_project 2 155078192 155134018 + MGP_BALBcJ_P0058722 Cnbd2 protein_coding protein_coding MGP_BALBcJ_T0058723.1 MGP_BALBcJ_G0026738.1 mouse_genomes_project 2 155078471 155104190 + Cnbd2 protein_coding processed_transcript MGP_BALBcJ_T0058724.1 MGP_BALBcJ_G0026738.1 mouse_genomes_project 2 155078510 155086580 + Cnbd2 protein_coding retained_intron MGP_BALBcJ_T0058725.1 MGP_BALBcJ_G0026738.1 mouse_genomes_project 2 155078526 155134021 + MGP_BALBcJ_P0058725 Cnbd2 protein_coding protein_coding MGP_BALBcJ_T0058726.1 MGP_BALBcJ_G0026738.1 mouse_genomes_project 2 155099410 155104792 + Cnbd2 protein_coding processed_transcript MGP_BALBcJ_T0017758.1 MGP_BALBcJ_G0015375.1 mouse_genomes_project 2 84783757 84788091 - Gm13734 processed_transcript processed_transcript MGP_BALBcJ_T0004103.1 MGP_BALBcJ_G0003631.1 mouse_genomes_project 2 145731193 145732185 + 6430503K07Rik antisense antisense MGP_BALBcJ_T0053730.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410740 27431061 - MGP_BALBcJ_P0053730 Kyat1 protein_coding protein_coding MGP_BALBcJ_T0053731.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410742 27431030 - Kyat1 protein_coding processed_transcript MGP_BALBcJ_T0053732.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410742 27430989 - MGP_BALBcJ_P0053732 Kyat1 protein_coding protein_coding MGP_BALBcJ_T0053733.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410747 27423803 - MGP_BALBcJ_P0053733 Kyat1 protein_coding protein_coding MGP_BALBcJ_T0053734.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410747 27431015 - MGP_BALBcJ_P0053734 Kyat1 protein_coding protein_coding MGP_BALBcJ_T0053735.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410884 27419733 - MGP_BALBcJ_P0053735 Kyat1 protein_coding protein_coding MGP_BALBcJ_T0053736.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27410884 27419733 - MGP_BALBcJ_P0053736 Kyat1 protein_coding protein_coding MGP_BALBcJ_T0053737.1 MGP_BALBcJ_G0025532.1 mouse_genomes_project 2 27416738 27431003 - Kyat1 protein_coding processed_transcript MGP_BALBcJ_T0056611.1 MGP_BALBcJ_G0026231.1 mouse_genomes_project 2 109298073 109299908 + MGP_BALBcJ_P0056611 protein_coding protein_coding MGP_BALBcJ_T0099674.1 MGP_BALBcJ_G0037710.1 mouse_genomes_project 2 45828082 45828202 - Gm25338 snRNA snRNA MGP_BALBcJ_T0057274.1 MGP_BALBcJ_G0026391.1 mouse_genomes_project 2 120771434 120789895 - MGP_BALBcJ_P0057274 Gatm protein_coding protein_coding MGP_BALBcJ_T0057275.1 MGP_BALBcJ_G0026391.1 mouse_genomes_project 2 120772379 120775401 - Gatm protein_coding processed_transcript MGP_BALBcJ_T0057276.1 MGP_BALBcJ_G0026391.1 mouse_genomes_project 2 120772496 120775679 - Gatm protein_coding retained_intron MGP_BALBcJ_T0054535.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36001130 36227300 - MGP_BALBcJ_P0054535 Nr6a1 protein_coding protein_coding MGP_BALBcJ_T0054536.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36001134 36225286 - MGP_BALBcJ_P0054536 Nr6a1 protein_coding protein_coding MGP_BALBcJ_T0054537.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36001134 36082414 - MGP_BALBcJ_P0054537 Nr6a1 protein_coding protein_coding MGP_BALBcJ_T0054538.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36032638 36035506 - Nr6a1 protein_coding processed_transcript MGP_BALBcJ_T0054539.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36033768 36037999 - Nr6a1 protein_coding processed_transcript MGP_BALBcJ_T0054540.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36034176 36082419 - MGP_BALBcJ_P0054540 Nr6a1 protein_coding protein_coding MGP_BALBcJ_T0054541.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36035465 36083010 - Nr6a1 protein_coding processed_transcript MGP_BALBcJ_T0054542.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36035584 36225344 - MGP_BALBcJ_P0054542 Nr6a1 protein_coding protein_coding MGP_BALBcJ_T0054543.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36037482 36082368 - Nr6a1 protein_coding processed_transcript MGP_BALBcJ_T0054544.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36037998 36058636 - Nr6a1 protein_coding retained_intron MGP_BALBcJ_T0054545.1 MGP_BALBcJ_G0025677.1 mouse_genomes_project 2 36079819 36082368 - Nr6a1 protein_coding processed_transcript MGP_BALBcJ_T0001023.1 MGP_BALBcJ_G0000951.1 mouse_genomes_project 2 8372242 8374453 - TEC TEC MGP_BALBcJ_T0055785.1 MGP_BALBcJ_G0025990.1 mouse_genomes_project 2 85343086 85344013 - MGP_BALBcJ_P0055785 Olfr1132 protein_coding protein_coding MGP_BALBcJ_T0007188.1 MGP_BALBcJ_G0005891.1 mouse_genomes_project 2 57412198 57413895 + Gm13572 lincRNA lincRNA MGP_BALBcJ_T0056201.1 MGP_BALBcJ_G0026137.1 mouse_genomes_project 2 90201674 90210719 - MGP_BALBcJ_P0056201 Mapk8ip1 protein_coding protein_coding MGP_BALBcJ_T0056202.1 MGP_BALBcJ_G0026137.1 mouse_genomes_project 2 90201678 90219172 - MGP_BALBcJ_P0056202 Mapk8ip1 protein_coding protein_coding MGP_BALBcJ_T0056203.1 MGP_BALBcJ_G0026137.1 mouse_genomes_project 2 90207889 90210720 - Mapk8ip1 protein_coding processed_transcript MGP_BALBcJ_T0055579.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113644 82164711 - MGP_BALBcJ_P0055579 protein_coding protein_coding MGP_BALBcJ_T0055580.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113644 82164711 - MGP_BALBcJ_P0055580 protein_coding protein_coding MGP_BALBcJ_T0055581.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113644 82164711 - MGP_BALBcJ_P0055581 protein_coding protein_coding MGP_BALBcJ_T0055582.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113644 82164711 - MGP_BALBcJ_P0055582 protein_coding protein_coding MGP_BALBcJ_T0055583.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113644 82164711 - MGP_BALBcJ_P0055583 protein_coding protein_coding MGP_BALBcJ_T0055584.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113646 82164711 - MGP_BALBcJ_P0055584 protein_coding protein_coding MGP_BALBcJ_T0055585.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113646 82164711 - MGP_BALBcJ_P0055585 protein_coding protein_coding MGP_BALBcJ_T0055586.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82113646 82164711 - MGP_BALBcJ_P0055586 protein_coding protein_coding MGP_BALBcJ_T0055587.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82114354 82164706 - MGP_BALBcJ_P0055587 protein_coding protein_coding MGP_BALBcJ_T0055588.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82114356 82164508 - protein_coding processed_transcript MGP_BALBcJ_T0055589.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82114356 82163439 - MGP_BALBcJ_P0055589 protein_coding protein_coding MGP_BALBcJ_T0055590.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82114356 82164478 - MGP_BALBcJ_P0055590 protein_coding protein_coding MGP_BALBcJ_T0055592.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82116101 82123220 - protein_coding processed_transcript MGP_BALBcJ_T0055593.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82116197 82123240 - protein_coding processed_transcript MGP_BALBcJ_T0055594.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82116460 82164709 - MGP_BALBcJ_P0055594 protein_coding protein_coding MGP_BALBcJ_T0055595.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82122529 82126163 - protein_coding processed_transcript MGP_BALBcJ_T0055596.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82137960 82152143 - protein_coding processed_transcript MGP_BALBcJ_T0055597.1 MGP_BALBcJ_G0025871.1 mouse_genomes_project 2 82137999 82162496 - protein_coding processed_transcript MGP_BALBcJ_T0057494.1 MGP_BALBcJ_G0026441.1 mouse_genomes_project 2 125890816 125914732 - MGP_BALBcJ_P0057494 Mal protein_coding protein_coding MGP_BALBcJ_T0057495.1 MGP_BALBcJ_G0026441.1 mouse_genomes_project 2 125892464 125914256 - MGP_BALBcJ_P0057495 Mal protein_coding protein_coding MGP_BALBcJ_T0007189.1 MGP_BALBcJ_G0005892.1 mouse_genomes_project 2 57502419 57503143 + Gm13620 lincRNA lincRNA MGP_BALBcJ_T0010434.1 MGP_BALBcJ_G0008559.1 mouse_genomes_project 2 119021181 119021258 - Gm44325 miRNA miRNA MGP_BALBcJ_T0058295.1 MGP_BALBcJ_G0026652.1 mouse_genomes_project 2 151358981 151369833 + MGP_BALBcJ_P0058295 Cox4i2 protein_coding protein_coding MGP_BALBcJ_T0058296.1 MGP_BALBcJ_G0026652.1 mouse_genomes_project 2 151359902 151369830 + MGP_BALBcJ_P0058296 Cox4i2 protein_coding protein_coding MGP_BALBcJ_T0102425.1 MGP_BALBcJ_G0040241.1 mouse_genomes_project 2 86410876 86411794 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013668.1 MGP_BALBcJ_G0011765.1 mouse_genomes_project 2 101766534 101766818 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058374.1 MGP_BALBcJ_G0026670.1 mouse_genomes_project 2 152114290 152116279 + MGP_BALBcJ_P0058374 4930404H24Rik protein_coding protein_coding MGP_BALBcJ_T0098581.1 MGP_BALBcJ_G0036635.1 mouse_genomes_project 2 163024102 163024220 - n-R5s207 rRNA rRNA MGP_BALBcJ_T0055100.1 MGP_BALBcJ_G0025774.1 mouse_genomes_project 2 67141282 67167232 - MGP_BALBcJ_P0055100 Fastkd1 protein_coding protein_coding MGP_BALBcJ_T0055101.1 MGP_BALBcJ_G0025774.1 mouse_genomes_project 2 67141404 67167084 - MGP_BALBcJ_P0055101 Fastkd1 protein_coding protein_coding MGP_BALBcJ_T0055102.1 MGP_BALBcJ_G0025774.1 mouse_genomes_project 2 67159721 67172350 - Fastkd1 protein_coding retained_intron MGP_BALBcJ_T0055103.1 MGP_BALBcJ_G0025774.1 mouse_genomes_project 2 67164389 67172368 - Fastkd1 protein_coding retained_intron MGP_BALBcJ_T0013817.1 MGP_BALBcJ_G0011914.1 mouse_genomes_project 2 155405743 155406383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013547.1 MGP_BALBcJ_G0011644.1 mouse_genomes_project 2 58439784 58440404 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054076.1 MGP_BALBcJ_G0025578.1 mouse_genomes_project 2 29647248 29651938 - MGP_BALBcJ_P0054076 1110008P14Rik protein_coding protein_coding MGP_BALBcJ_T0054077.1 MGP_BALBcJ_G0025578.1 mouse_genomes_project 2 29649176 29652014 - MGP_BALBcJ_P0054077 1110008P14Rik protein_coding protein_coding MGP_BALBcJ_T0059834.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180705002 180708040 + MGP_BALBcJ_P0059834 Lime1 protein_coding protein_coding MGP_BALBcJ_T0059835.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180706159 180708553 + MGP_BALBcJ_P0059835 Lime1 protein_coding protein_coding MGP_BALBcJ_T0059836.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180706282 180708479 + Lime1 protein_coding retained_intron MGP_BALBcJ_T0059837.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180706282 180707879 + Lime1 protein_coding retained_intron MGP_BALBcJ_T0059838.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180706282 180708548 + MGP_BALBcJ_P0059838 Lime1 protein_coding protein_coding MGP_BALBcJ_T0059839.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180706796 180708553 + MGP_BALBcJ_P0059839 Lime1 protein_coding protein_coding MGP_BALBcJ_T0059840.1 MGP_BALBcJ_G0026997.1 mouse_genomes_project 2 180707410 180708238 + Lime1 protein_coding retained_intron MGP_BALBcJ_T0011507.1 MGP_BALBcJ_G0009632.1 mouse_genomes_project 2 180148411 180148529 + Gm22842 misc_RNA misc_RNA MGP_BALBcJ_T0052853.1 MGP_BALBcJ_G0025378.1 mouse_genomes_project 2 21319064 21322860 - MGP_BALBcJ_P0052853 Il1f8 protein_coding protein_coding MGP_BALBcJ_T0010356.1 MGP_BALBcJ_G0008481.1 mouse_genomes_project 2 7523072 7523197 + Mir669h miRNA miRNA MGP_BALBcJ_T0098871.1 MGP_BALBcJ_G0036919.1 mouse_genomes_project 2 127754880 127771231 - Gm14040 sense_intronic sense_intronic MGP_BALBcJ_T0057322.1 MGP_BALBcJ_G0026399.1 mouse_genomes_project 2 123347596 123362319 - MGP_BALBcJ_P0057322 Gm9833 protein_coding protein_coding MGP_BALBcJ_T0055781.1 MGP_BALBcJ_G0025986.1 mouse_genomes_project 2 85296872 85297817 + MGP_BALBcJ_P0055781 Olfr1130 protein_coding protein_coding MGP_BALBcJ_T0056242.1 MGP_BALBcJ_G0026147.1 mouse_genomes_project 2 91482174 91521365 + MGP_BALBcJ_P0056242 Alx4 protein_coding protein_coding MGP_BALBcJ_T0056243.1 MGP_BALBcJ_G0026147.1 mouse_genomes_project 2 91482178 91521365 + MGP_BALBcJ_P0056243 Alx4 protein_coding protein_coding MGP_BALBcJ_T0013554.1 MGP_BALBcJ_G0011651.1 mouse_genomes_project 2 62718948 62719958 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099669.1 MGP_BALBcJ_G0037705.1 mouse_genomes_project 2 32221366 32221470 + Gm24905 snRNA snRNA MGP_BALBcJ_T0102408.1 MGP_BALBcJ_G0040224.1 mouse_genomes_project 2 84065360 84066303 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0056626.1 MGP_BALBcJ_G0026246.1 mouse_genomes_project 2 109894214 109896910 - MGP_BALBcJ_P0056626 protein_coding protein_coding MGP_BALBcJ_T0054762.1 MGP_BALBcJ_G0025710.1 mouse_genomes_project 2 50643502 50671094 + Arl6ip6 protein_coding processed_transcript MGP_BALBcJ_T0054763.1 MGP_BALBcJ_G0025710.1 mouse_genomes_project 2 50643864 50672780 + MGP_BALBcJ_P0054763 Arl6ip6 protein_coding protein_coding MGP_BALBcJ_T0013548.1 MGP_BALBcJ_G0011645.1 mouse_genomes_project 2 58634267 58634558 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055681.1 MGP_BALBcJ_G0025896.1 mouse_genomes_project 2 82860619 82870504 - MGP_BALBcJ_P0055681 protein_coding protein_coding MGP_BALBcJ_T0003937.1 MGP_BALBcJ_G0003516.1 mouse_genomes_project 2 30458956 30462924 + Gm13528 antisense antisense MGP_BALBcJ_T0058894.1 MGP_BALBcJ_G0026770.1 mouse_genomes_project 2 157322532 157328124 + MGP_BALBcJ_P0058894 Adig protein_coding protein_coding MGP_BALBcJ_T0058895.1 MGP_BALBcJ_G0026770.1 mouse_genomes_project 2 157322573 157328124 + MGP_BALBcJ_P0058895 Adig protein_coding protein_coding MGP_BALBcJ_T0058896.1 MGP_BALBcJ_G0026770.1 mouse_genomes_project 2 157322659 157325835 + Adig protein_coding processed_transcript MGP_BALBcJ_T0013486.1 MGP_BALBcJ_G0011583.1 mouse_genomes_project 2 36837398 36837881 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098873.1 MGP_BALBcJ_G0036921.1 mouse_genomes_project 2 143853913 143897233 + Gm14093 sense_intronic sense_intronic MGP_BALBcJ_T0100925.1 MGP_BALBcJ_G0038961.1 mouse_genomes_project 2 17023450 17023541 + Gm25859 snoRNA snoRNA MGP_BALBcJ_T0055539.1 MGP_BALBcJ_G0025862.1 mouse_genomes_project 2 79653492 79860907 + MGP_BALBcJ_P0055539 Zfp804a protein_coding protein_coding MGP_BALBcJ_T0055540.1 MGP_BALBcJ_G0025862.1 mouse_genomes_project 2 79835140 79857914 + Zfp804a protein_coding processed_transcript MGP_BALBcJ_T0059296.1 MGP_BALBcJ_G0026875.1 mouse_genomes_project 2 165004723 165086689 - MGP_BALBcJ_P0059296 Sulf2 protein_coding protein_coding MGP_BALBcJ_T0059297.1 MGP_BALBcJ_G0026875.1 mouse_genomes_project 2 165005085 165087458 - Sulf2 protein_coding processed_transcript MGP_BALBcJ_T0059298.1 MGP_BALBcJ_G0026875.1 mouse_genomes_project 2 165005605 165006952 - Sulf2 protein_coding retained_intron MGP_BALBcJ_T0059299.1 MGP_BALBcJ_G0026875.1 mouse_genomes_project 2 165005748 165009052 - Sulf2 protein_coding processed_transcript MGP_BALBcJ_T0059300.1 MGP_BALBcJ_G0026875.1 mouse_genomes_project 2 165024289 165086659 - Sulf2 protein_coding processed_transcript MGP_BALBcJ_T0059301.1 MGP_BALBcJ_G0026875.1 mouse_genomes_project 2 165064559 165086276 - Sulf2 protein_coding processed_transcript MGP_BALBcJ_T0013509.1 MGP_BALBcJ_G0011606.1 mouse_genomes_project 2 47977149 47977328 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013802.1 MGP_BALBcJ_G0011899.1 mouse_genomes_project 2 151349847 151350448 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059899.1 MGP_BALBcJ_G0027006.1 mouse_genomes_project 2 181005968 181007773 - MGP_BALBcJ_P0059899 Sox18 protein_coding protein_coding MGP_BALBcJ_T0001030.1 MGP_BALBcJ_G0000958.1 mouse_genomes_project 2 10070731 10073967 + TEC TEC MGP_BALBcJ_T0059062.1 MGP_BALBcJ_G0026813.1 mouse_genomes_project 2 163042983 163049471 - MGP_BALBcJ_P0059062 Wfdc5 protein_coding protein_coding MGP_BALBcJ_T0059063.1 MGP_BALBcJ_G0026813.1 mouse_genomes_project 2 163044123 163049327 - MGP_BALBcJ_P0059063 Wfdc5 protein_coding protein_coding MGP_BALBcJ_T0013807.1 MGP_BALBcJ_G0011904.1 mouse_genomes_project 2 154211996 154213387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013426.1 MGP_BALBcJ_G0011523.1 mouse_genomes_project 2 15724427 15724689 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102443.1 MGP_BALBcJ_G0040259.1 mouse_genomes_project 2 147480808 147484781 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058796.1 MGP_BALBcJ_G0026752.1 mouse_genomes_project 2 155931291 155995379 - MGP_BALBcJ_P0058796 Rbl1 protein_coding protein_coding MGP_BALBcJ_T0058797.1 MGP_BALBcJ_G0026752.1 mouse_genomes_project 2 155947684 155995322 - MGP_BALBcJ_P0058797 Rbl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0058798.1 MGP_BALBcJ_G0026752.1 mouse_genomes_project 2 155947684 155995322 - MGP_BALBcJ_P0058798 Rbl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0058799.1 MGP_BALBcJ_G0026752.1 mouse_genomes_project 2 155947725 155995401 - Rbl1 protein_coding retained_intron MGP_BALBcJ_T0058800.1 MGP_BALBcJ_G0026752.1 mouse_genomes_project 2 155952844 155995393 - Rbl1 protein_coding retained_intron MGP_BALBcJ_T0058801.1 MGP_BALBcJ_G0026752.1 mouse_genomes_project 2 155978529 155982650 - Rbl1 protein_coding retained_intron MGP_BALBcJ_T0057384.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124858388 124906759 - MGP_BALBcJ_P0057384 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057385.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124859859 124906693 - MGP_BALBcJ_P0057385 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057386.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124859861 124906735 - MGP_BALBcJ_P0057386 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057387.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124869550 124907527 - MGP_BALBcJ_P0057387 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057388.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124869935 124906677 - MGP_BALBcJ_P0057388 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057389.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124878661 124906783 - MGP_BALBcJ_P0057389 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057390.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124883239 124906530 - Gabpb1 protein_coding processed_transcript MGP_BALBcJ_T0057391.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124884528 124906543 - MGP_BALBcJ_P0057391 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0057392.1 MGP_BALBcJ_G0026417.1 mouse_genomes_project 2 124884605 124894193 - MGP_BALBcJ_P0057392 Gabpb1 protein_coding protein_coding MGP_BALBcJ_T0007174.1 MGP_BALBcJ_G0005879.1 mouse_genomes_project 2 43820589 43847777 - Gm13470 lincRNA lincRNA MGP_BALBcJ_T0053722.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27386219 27391196 - D2Wsu81e protein_coding retained_intron MGP_BALBcJ_T0053723.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27386219 27391209 - D2Wsu81e protein_coding retained_intron MGP_BALBcJ_T0053724.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27386234 27390272 - D2Wsu81e protein_coding retained_intron MGP_BALBcJ_T0053725.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27386237 27390751 - D2Wsu81e protein_coding retained_intron MGP_BALBcJ_T0053726.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27386237 27391217 - MGP_BALBcJ_P0053726 D2Wsu81e protein_coding protein_coding MGP_BALBcJ_T0053727.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27386239 27391226 - D2Wsu81e protein_coding retained_intron MGP_BALBcJ_T0053728.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27387697 27390732 - D2Wsu81e protein_coding processed_transcript MGP_BALBcJ_T0053729.1 MGP_BALBcJ_G0025531.1 mouse_genomes_project 2 27389129 27391222 - D2Wsu81e protein_coding retained_intron MGP_BALBcJ_T0056746.1 MGP_BALBcJ_G0026287.1 mouse_genomes_project 2 116301071 116397426 - MGP_BALBcJ_P0056746 Gpr176 protein_coding protein_coding MGP_BALBcJ_T0007176.1 MGP_BALBcJ_G0005881.1 mouse_genomes_project 2 47259197 47266170 - Gm13480 lincRNA lincRNA MGP_BALBcJ_T0003880.1 MGP_BALBcJ_G0003471.1 mouse_genomes_project 2 6892685 6894294 + Gm13256 antisense antisense MGP_BALBcJ_T0058760.1 MGP_BALBcJ_G0026745.1 mouse_genomes_project 2 155639323 155649792 + MGP_BALBcJ_P0058760 1110008F13Rik protein_coding protein_coding MGP_BALBcJ_T0058761.1 MGP_BALBcJ_G0026745.1 mouse_genomes_project 2 155639334 155649627 + 1110008F13Rik protein_coding processed_transcript MGP_BALBcJ_T0058762.1 MGP_BALBcJ_G0026745.1 mouse_genomes_project 2 155639340 155643183 + 1110008F13Rik protein_coding retained_intron MGP_BALBcJ_T0058764.1 MGP_BALBcJ_G0026745.1 mouse_genomes_project 2 155648770 155649625 + 1110008F13Rik protein_coding processed_transcript MGP_BALBcJ_T0013653.1 MGP_BALBcJ_G0011750.1 mouse_genomes_project 2 95826595 95827084 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052725.1 MGP_BALBcJ_G0025351.1 mouse_genomes_project 2 15925120 16079064 - MGP_BALBcJ_P0052725 Pip4k2a protein_coding protein_coding MGP_BALBcJ_T0052726.1 MGP_BALBcJ_G0025351.1 mouse_genomes_project 2 15927236 15949320 - MGP_BALBcJ_P0052726 Pip4k2a protein_coding protein_coding MGP_BALBcJ_T0052727.1 MGP_BALBcJ_G0025351.1 mouse_genomes_project 2 15930362 15987207 - MGP_BALBcJ_P0052727 Pip4k2a protein_coding protein_coding MGP_BALBcJ_T0053666.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171059 27236738 + MGP_BALBcJ_P0053666 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053667.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171059 27236741 + MGP_BALBcJ_P0053667 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053668.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171176 27199338 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053669.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171178 27172649 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053670.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171179 27236735 + MGP_BALBcJ_P0053670 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053671.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171179 27236741 + MGP_BALBcJ_P0053671 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053672.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171179 27189019 + MGP_BALBcJ_P0053672 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053673.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27171182 27236741 + MGP_BALBcJ_P0053673 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053674.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27183879 27236474 + MGP_BALBcJ_P0053674 Sptan1 protein_coding protein_coding MGP_BALBcJ_T0053675.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27197256 27199331 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053676.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27207183 27213402 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053677.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27209387 27211946 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053678.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27227110 27230273 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053679.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27232853 27235807 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053680.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27232886 27235791 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0053681.1 MGP_BALBcJ_G0025522.1 mouse_genomes_project 2 27235598 27236465 + Sptan1 protein_coding retained_intron MGP_BALBcJ_T0010439.1 MGP_BALBcJ_G0008564.1 mouse_genomes_project 2 127194382 127194488 - Gm22859 miRNA miRNA MGP_BALBcJ_T0054002.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29501488 29520345 + MGP_BALBcJ_P0054002 Pomt1 protein_coding protein_coding MGP_BALBcJ_T0054003.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29501541 29502599 + Pomt1 protein_coding retained_intron MGP_BALBcJ_T0054004.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29501570 29509337 + Pomt1 protein_coding retained_intron MGP_BALBcJ_T0054005.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29501583 29520341 + Pomt1 protein_coding retained_intron MGP_BALBcJ_T0054006.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29501935 29508962 + MGP_BALBcJ_P0054006 Pomt1 protein_coding protein_coding MGP_BALBcJ_T0054007.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29502237 29509052 + MGP_BALBcJ_P0054007 Pomt1 protein_coding protein_coding MGP_BALBcJ_T0054008.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29509698 29516249 + MGP_BALBcJ_P0054008 Pomt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054009.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29510629 29514031 + Pomt1 protein_coding retained_intron MGP_BALBcJ_T0054010.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29512912 29517111 + Pomt1 protein_coding retained_intron MGP_BALBcJ_T0054011.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29514002 29519125 + MGP_BALBcJ_P0054011 Pomt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054012.1 MGP_BALBcJ_G0025572.1 mouse_genomes_project 2 29516612 29518032 + Pomt1 protein_coding retained_intron MGP_BALBcJ_T0013710.1 MGP_BALBcJ_G0011807.1 mouse_genomes_project 2 117549687 117550362 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058276.1 MGP_BALBcJ_G0026642.1 mouse_genomes_project 2 151168466 151168667 + MGP_BALBcJ_P0058276 Gm17416 protein_coding protein_coding MGP_BALBcJ_T0102396.1 MGP_BALBcJ_G0040212.1 mouse_genomes_project 2 67721839 67724014 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100973.1 MGP_BALBcJ_G0039009.1 mouse_genomes_project 2 117791123 117791252 - Gm25857 snoRNA snoRNA MGP_BALBcJ_T0007272.1 MGP_BALBcJ_G0005961.1 mouse_genomes_project 2 112894840 113223720 - lincRNA lincRNA MGP_BALBcJ_T0101010.1 MGP_BALBcJ_G0039046.1 mouse_genomes_project 2 166018151 166018240 + Gm23201 snoRNA snoRNA MGP_BALBcJ_T0013772.1 MGP_BALBcJ_G0011869.1 mouse_genomes_project 2 143456529 143457350 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007133.1 MGP_BALBcJ_G0005849.1 mouse_genomes_project 2 21607909 21629453 - Gm13417 lincRNA lincRNA MGP_BALBcJ_T0055642.1 MGP_BALBcJ_G0025886.1 mouse_genomes_project 2 82393299 82408524 - MGP_BALBcJ_P0055642 Rtn4rl2 protein_coding protein_coding MGP_BALBcJ_T0055643.1 MGP_BALBcJ_G0025886.1 mouse_genomes_project 2 82393321 82408506 - MGP_BALBcJ_P0055643 Rtn4rl2 protein_coding protein_coding MGP_BALBcJ_T0055644.1 MGP_BALBcJ_G0025886.1 mouse_genomes_project 2 82401891 82408290 - Rtn4rl2 protein_coding processed_transcript MGP_BALBcJ_T0053202.1 MGP_BALBcJ_G0025440.1 mouse_genomes_project 2 22817112 22818095 + MGP_BALBcJ_P0053202 Bmyc protein_coding protein_coding MGP_BALBcJ_T0056624.1 MGP_BALBcJ_G0026244.1 mouse_genomes_project 2 109811954 109816693 - MGP_BALBcJ_P0056624 Olfr1303 protein_coding protein_coding MGP_BALBcJ_T0013432.1 MGP_BALBcJ_G0011529.1 mouse_genomes_project 2 17049827 17051258 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013847.1 MGP_BALBcJ_G0011944.1 mouse_genomes_project 2 166244402 166244761 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017847.1 MGP_BALBcJ_G0015417.1 mouse_genomes_project 2 149298820 149300262 + E130215H24Rik processed_transcript processed_transcript MGP_BALBcJ_T0053282.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23488698 23506538 - MGP_BALBcJ_P0053282 Snapc4 protein_coding protein_coding MGP_BALBcJ_T0053283.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23488700 23490958 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053284.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23488707 23506542 - MGP_BALBcJ_P0053284 Snapc4 protein_coding protein_coding MGP_BALBcJ_T0053285.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23488709 23506521 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053286.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23492547 23493704 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053287.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23495390 23499565 - MGP_BALBcJ_P0053287 Snapc4 protein_coding protein_coding MGP_BALBcJ_T0053288.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23495419 23499545 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053289.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23495440 23497076 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053290.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23495917 23500062 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053291.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23496766 23499289 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053292.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23496766 23506524 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053293.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23499495 23500672 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053294.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23503571 23506542 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0053295.1 MGP_BALBcJ_G0025458.1 mouse_genomes_project 2 23504276 23506515 - Snapc4 protein_coding processed_transcript MGP_BALBcJ_T0058186.1 MGP_BALBcJ_G0026613.1 mouse_genomes_project 2 149669995 149679550 - MGP_BALBcJ_P0058186 protein_coding protein_coding MGP_BALBcJ_T0052845.1 MGP_BALBcJ_G0025374.1 mouse_genomes_project 2 21040732 21090626 - MGP_BALBcJ_P0052845 Hnmt protein_coding protein_coding MGP_BALBcJ_T0052846.1 MGP_BALBcJ_G0025374.1 mouse_genomes_project 2 21040762 21090312 - MGP_BALBcJ_P0052846 Hnmt protein_coding protein_coding MGP_BALBcJ_T0052847.1 MGP_BALBcJ_G0025374.1 mouse_genomes_project 2 21041351 21090099 - MGP_BALBcJ_P0052847 Hnmt protein_coding protein_coding MGP_BALBcJ_T0013748.1 MGP_BALBcJ_G0011845.1 mouse_genomes_project 2 131666586 131667196 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059383.1 MGP_BALBcJ_G0026890.1 mouse_genomes_project 2 166456611 166480187 + MGP_BALBcJ_P0059383 Rnf114 protein_coding protein_coding MGP_BALBcJ_T0059384.1 MGP_BALBcJ_G0026890.1 mouse_genomes_project 2 166467060 166480194 + MGP_BALBcJ_P0059384 Rnf114 protein_coding protein_coding MGP_BALBcJ_T0059385.1 MGP_BALBcJ_G0026890.1 mouse_genomes_project 2 166467417 166480185 + MGP_BALBcJ_P0059385 Rnf114 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099695.1 MGP_BALBcJ_G0037731.1 mouse_genomes_project 2 120491563 120491715 - Gm24409 snRNA snRNA MGP_BALBcJ_T0010442.1 MGP_BALBcJ_G0008567.1 mouse_genomes_project 2 129723801 129723887 + Mir103-2 miRNA miRNA MGP_BALBcJ_T0058685.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154907690 154944229 - MGP_BALBcJ_P0058685 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058686.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154907697 154943571 - MGP_BALBcJ_P0058686 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058687.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154907700 154944158 - MGP_BALBcJ_P0058687 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058688.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154907700 154944140 - MGP_BALBcJ_P0058688 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058689.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154908391 154944167 - MGP_BALBcJ_P0058689 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058690.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154908391 154944175 - MGP_BALBcJ_P0058690 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058691.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154909686 154926592 - MGP_BALBcJ_P0058691 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058692.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154922613 154944133 - MGP_BALBcJ_P0058692 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058693.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154922615 154926881 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0058694.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154923597 154930926 - Rbm39 protein_coding processed_transcript MGP_BALBcJ_T0058695.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154925485 154929837 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0058696.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154926474 154944150 - MGP_BALBcJ_P0058696 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058697.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154926588 154936943 - Rbm39 protein_coding processed_transcript MGP_BALBcJ_T0058698.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154929227 154941722 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0058699.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154931522 154941371 - Rbm39 protein_coding processed_transcript MGP_BALBcJ_T0058700.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154936814 154944152 - MGP_BALBcJ_P0058700 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058701.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154936913 154944138 - MGP_BALBcJ_P0058701 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058702.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154936935 154941892 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0058703.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154938674 154943903 - MGP_BALBcJ_P0058703 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058704.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154938678 154944147 - MGP_BALBcJ_P0058704 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058705.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154938763 154944229 - MGP_BALBcJ_P0058705 Rbm39 protein_coding protein_coding MGP_BALBcJ_T0058706.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154941148 154944187 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0058707.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154941348 154944140 - MGP_BALBcJ_P0058707 Rbm39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058708.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154942549 154944203 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0058709.1 MGP_BALBcJ_G0026735.1 mouse_genomes_project 2 154942551 154944136 - Rbm39 protein_coding retained_intron MGP_BALBcJ_T0059900.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181016433 181023471 + Tcea2 protein_coding retained_intron MGP_BALBcJ_T0059901.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181016433 181024195 + MGP_BALBcJ_P0059901 Tcea2 protein_coding protein_coding MGP_BALBcJ_T0059902.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181017313 181024175 + MGP_BALBcJ_P0059902 Tcea2 protein_coding protein_coding MGP_BALBcJ_T0059903.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181019008 181024169 + MGP_BALBcJ_P0059903 Tcea2 protein_coding protein_coding MGP_BALBcJ_T0059904.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181019289 181022416 + Tcea2 protein_coding processed_transcript MGP_BALBcJ_T0059905.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181019698 181024035 + Tcea2 protein_coding retained_intron MGP_BALBcJ_T0059906.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181019724 181023058 + Tcea2 protein_coding retained_intron MGP_BALBcJ_T0059907.1 MGP_BALBcJ_G0027007.1 mouse_genomes_project 2 181023639 181024186 + Tcea2 protein_coding processed_transcript MGP_BALBcJ_T0054786.1 MGP_BALBcJ_G0025717.1 mouse_genomes_project 2 55473461 55482734 - MGP_BALBcJ_P0054786 Ermn protein_coding protein_coding MGP_BALBcJ_T0010376.1 MGP_BALBcJ_G0008501.1 mouse_genomes_project 2 27049832 27049897 + Mir219b miRNA miRNA MGP_BALBcJ_T0013785.1 MGP_BALBcJ_G0011882.1 mouse_genomes_project 2 146619985 146620479 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055738.1 MGP_BALBcJ_G0025951.1 mouse_genomes_project 2 84367574 84368510 - MGP_BALBcJ_P0055738 Olfr1089 protein_coding protein_coding MGP_BALBcJ_T0052540.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8808552 8809536 + MGP_BALBcJ_P0052540 Ankrd16 protein_coding protein_coding MGP_BALBcJ_T0052541.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8809167 8821423 + MGP_BALBcJ_P0052541 Ankrd16 protein_coding protein_coding MGP_BALBcJ_T0052542.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8809200 8821427 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0052543.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8809203 8821401 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0052544.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8809240 8821423 + MGP_BALBcJ_P0052544 Ankrd16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052545.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8809248 8811941 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0052546.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8810561 8820866 + MGP_BALBcJ_P0052546 Ankrd16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052547.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8813965 8821418 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0052548.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8813985 8821012 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0052549.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8814881 8821399 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0052550.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8814969 8821394 + MGP_BALBcJ_P0052550 Ankrd16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052551.1 MGP_BALBcJ_G0025322.1 mouse_genomes_project 2 8816834 8821220 + Ankrd16 protein_coding retained_intron MGP_BALBcJ_T0001038.1 MGP_BALBcJ_G0000966.1 mouse_genomes_project 2 11105038 11107637 - TEC TEC MGP_BALBcJ_T0057919.1 MGP_BALBcJ_G0026539.1 mouse_genomes_project 2 136745657 137026070 + Btbd3 protein_coding processed_transcript MGP_BALBcJ_T0057920.1 MGP_BALBcJ_G0026539.1 mouse_genomes_project 2 136745665 137076371 + Btbd3 protein_coding processed_transcript MGP_BALBcJ_T0057921.1 MGP_BALBcJ_G0026539.1 mouse_genomes_project 2 136767923 136776554 + MGP_BALBcJ_P0057921 Btbd3 protein_coding protein_coding MGP_BALBcJ_T0055838.1 MGP_BALBcJ_G0026039.1 mouse_genomes_project 2 86636355 86638761 + MGP_BALBcJ_P0055838 Olfr1205 protein_coding protein_coding MGP_BALBcJ_T0058834.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360591 156362922 + MGP_BALBcJ_P0058834 Nnat protein_coding protein_coding MGP_BALBcJ_T0058835.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360620 156362656 + MGP_BALBcJ_P0058835 Nnat protein_coding protein_coding MGP_BALBcJ_T0058836.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360623 156362940 + MGP_BALBcJ_P0058836 Nnat protein_coding protein_coding MGP_BALBcJ_T0058837.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360629 156362922 + MGP_BALBcJ_P0058837 Nnat protein_coding protein_coding MGP_BALBcJ_T0058838.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360634 156362410 + MGP_BALBcJ_P0058838 Nnat protein_coding protein_coding MGP_BALBcJ_T0058839.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360636 156361790 + MGP_BALBcJ_P0058839 Nnat protein_coding protein_coding MGP_BALBcJ_T0058840.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360637 156362200 + MGP_BALBcJ_P0058840 Nnat protein_coding protein_coding MGP_BALBcJ_T0058841.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360643 156362198 + MGP_BALBcJ_P0058841 Nnat protein_coding protein_coding MGP_BALBcJ_T0058842.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156360653 156362935 + Nnat protein_coding retained_intron MGP_BALBcJ_T0058843.1 MGP_BALBcJ_G0026759.1 mouse_genomes_project 2 156361426 156362273 + Nnat protein_coding retained_intron MGP_BALBcJ_T0055862.1 MGP_BALBcJ_G0026060.1 mouse_genomes_project 2 87009203 87010136 - MGP_BALBcJ_P0055862 Olfr1226 protein_coding protein_coding MGP_BALBcJ_T0053943.1 MGP_BALBcJ_G0025562.1 mouse_genomes_project 2 28918959 28929512 + MGP_BALBcJ_P0053943 Exosc2 protein_coding protein_coding MGP_BALBcJ_T0053944.1 MGP_BALBcJ_G0025562.1 mouse_genomes_project 2 28918963 28928990 + Exosc2 protein_coding retained_intron MGP_BALBcJ_T0053945.1 MGP_BALBcJ_G0025562.1 mouse_genomes_project 2 28918978 28928529 + MGP_BALBcJ_P0053945 Exosc2 protein_coding protein_coding MGP_BALBcJ_T0053946.1 MGP_BALBcJ_G0025562.1 mouse_genomes_project 2 28918987 28926481 + MGP_BALBcJ_P0053946 Exosc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053947.1 MGP_BALBcJ_G0025562.1 mouse_genomes_project 2 28921225 28926554 + Exosc2 protein_coding processed_transcript MGP_BALBcJ_T0053948.1 MGP_BALBcJ_G0025562.1 mouse_genomes_project 2 28926304 28928522 + Exosc2 protein_coding retained_intron MGP_BALBcJ_T0055515.1 MGP_BALBcJ_G0025855.1 mouse_genomes_project 2 77879935 77882820 + MGP_BALBcJ_P0055515 Prdx6b protein_coding protein_coding MGP_BALBcJ_T0054432.1 MGP_BALBcJ_G0025636.1 mouse_genomes_project 2 33449877 33503996 + MGP_BALBcJ_P0054432 Mrrf protein_coding protein_coding MGP_BALBcJ_T0054433.1 MGP_BALBcJ_G0025636.1 mouse_genomes_project 2 33449886 33452306 + Mrrf protein_coding retained_intron MGP_BALBcJ_T0054434.1 MGP_BALBcJ_G0025636.1 mouse_genomes_project 2 33450122 33461774 + MGP_BALBcJ_P0054434 Mrrf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054435.1 MGP_BALBcJ_G0025636.1 mouse_genomes_project 2 33460957 33473319 + Mrrf protein_coding processed_transcript MGP_BALBcJ_T0057545.1 MGP_BALBcJ_G0026456.1 mouse_genomes_project 2 127233823 127284768 + MGP_BALBcJ_P0057545 Zc3h6 protein_coding protein_coding MGP_BALBcJ_T0057546.1 MGP_BALBcJ_G0026456.1 mouse_genomes_project 2 127233830 127260373 + MGP_BALBcJ_P0057546 Zc3h6 protein_coding protein_coding MGP_BALBcJ_T0056140.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744063 89777201 - MGP_BALBcJ_P0056140 Dgkz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056141.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744063 89787496 - MGP_BALBcJ_P0056141 Dgkz protein_coding protein_coding MGP_BALBcJ_T0056142.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744065 89775271 - MGP_BALBcJ_P0056142 Dgkz protein_coding protein_coding MGP_BALBcJ_T0056143.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744066 89777214 - MGP_BALBcJ_P0056143 Dgkz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056144.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744066 89761687 - MGP_BALBcJ_P0056144 Dgkz protein_coding protein_coding MGP_BALBcJ_T0056145.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744475 89745172 - Dgkz protein_coding retained_intron MGP_BALBcJ_T0056146.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744623 89745821 - Dgkz protein_coding retained_intron MGP_BALBcJ_T0056147.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744681 89746739 - Dgkz protein_coding retained_intron MGP_BALBcJ_T0056148.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89744694 89745751 - Dgkz protein_coding retained_intron MGP_BALBcJ_T0056149.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89745020 89746840 - Dgkz protein_coding retained_intron MGP_BALBcJ_T0056150.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89747146 89749264 - Dgkz protein_coding processed_transcript MGP_BALBcJ_T0056151.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89751993 89761571 - MGP_BALBcJ_P0056151 Dgkz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056152.1 MGP_BALBcJ_G0026130.1 mouse_genomes_project 2 89752244 89756523 - Dgkz protein_coding processed_transcript MGP_BALBcJ_T0101006.1 MGP_BALBcJ_G0039042.1 mouse_genomes_project 2 161605741 161605867 + Gm22936 snoRNA snoRNA MGP_BALBcJ_T0055859.1 MGP_BALBcJ_G0026057.1 mouse_genomes_project 2 86954391 86955326 - MGP_BALBcJ_P0055859 Olfr1223 protein_coding protein_coding MGP_BALBcJ_T0007259.1 MGP_BALBcJ_G0005949.1 mouse_genomes_project 2 101292171 101303533 - BC016548 lincRNA lincRNA MGP_BALBcJ_T0007260.1 MGP_BALBcJ_G0005949.1 mouse_genomes_project 2 101298485 101303531 - BC016548 lincRNA lincRNA MGP_BALBcJ_T0013593.1 MGP_BALBcJ_G0011690.1 mouse_genomes_project 2 76598936 76599387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013695.1 MGP_BALBcJ_G0011792.1 mouse_genomes_project 2 109686256 109686412 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004154.1 MGP_BALBcJ_G0003672.1 mouse_genomes_project 2 166989743 166990721 + Gm14236 antisense antisense MGP_BALBcJ_T0003908.1 MGP_BALBcJ_G0003493.1 mouse_genomes_project 2 23182547 23183866 + Gm13554 antisense antisense MGP_BALBcJ_T0007155.1 MGP_BALBcJ_G0005865.1 mouse_genomes_project 2 31230579 31236905 - Gm13403 lincRNA lincRNA MGP_BALBcJ_T0007156.1 MGP_BALBcJ_G0005865.1 mouse_genomes_project 2 31232686 31236937 - Gm13403 lincRNA lincRNA MGP_BALBcJ_T0098861.1 MGP_BALBcJ_G0036909.1 mouse_genomes_project 2 1050557 1053617 + Gm38085 sense_intronic sense_intronic MGP_BALBcJ_T0059785.1 MGP_BALBcJ_G0026991.1 mouse_genomes_project 2 180544000 180558708 - MGP_BALBcJ_P0059785 Helz2 protein_coding protein_coding MGP_BALBcJ_T0059786.1 MGP_BALBcJ_G0026991.1 mouse_genomes_project 2 180544001 180558706 - MGP_BALBcJ_P0059786 Helz2 protein_coding protein_coding MGP_BALBcJ_T0059787.1 MGP_BALBcJ_G0026991.1 mouse_genomes_project 2 180544004 180558644 - MGP_BALBcJ_P0059787 Helz2 protein_coding protein_coding MGP_BALBcJ_T0059788.1 MGP_BALBcJ_G0026991.1 mouse_genomes_project 2 180544007 180552439 - Helz2 protein_coding retained_intron MGP_BALBcJ_T0059789.1 MGP_BALBcJ_G0026991.1 mouse_genomes_project 2 180553841 180558706 - Helz2 protein_coding retained_intron MGP_BALBcJ_T0055892.1 MGP_BALBcJ_G0026081.1 mouse_genomes_project 2 87616168 87617172 + MGP_BALBcJ_P0055892 Olfr1255 protein_coding protein_coding MGP_BALBcJ_T0055709.1 MGP_BALBcJ_G0025923.1 mouse_genomes_project 2 83595731 83596642 + MGP_BALBcJ_P0055709 Olfr1033 protein_coding protein_coding MGP_BALBcJ_T0013689.1 MGP_BALBcJ_G0011786.1 mouse_genomes_project 2 108355020 108356290 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055748.1 MGP_BALBcJ_G0025961.1 mouse_genomes_project 2 84628172 84629105 - MGP_BALBcJ_P0055748 Olfr1101 protein_coding protein_coding MGP_BALBcJ_T0056434.1 MGP_BALBcJ_G0026180.1 mouse_genomes_project 2 101948802 101983710 + MGP_BALBcJ_P0056434 Fbxo3 protein_coding protein_coding MGP_BALBcJ_T0056435.1 MGP_BALBcJ_G0026180.1 mouse_genomes_project 2 101948898 101977967 + MGP_BALBcJ_P0056435 Fbxo3 protein_coding unknown_likely_coding MGP_BALBcJ_T0056436.1 MGP_BALBcJ_G0026180.1 mouse_genomes_project 2 101948919 101977993 + MGP_BALBcJ_P0056436 Fbxo3 protein_coding protein_coding MGP_BALBcJ_T0056437.1 MGP_BALBcJ_G0026180.1 mouse_genomes_project 2 101948921 101983473 + MGP_BALBcJ_P0056437 Fbxo3 protein_coding protein_coding MGP_BALBcJ_T0056438.1 MGP_BALBcJ_G0026180.1 mouse_genomes_project 2 101948923 101977960 + Fbxo3 protein_coding processed_transcript MGP_BALBcJ_T0056439.1 MGP_BALBcJ_G0026180.1 mouse_genomes_project 2 101948935 101977974 + MGP_BALBcJ_P0056439 Fbxo3 protein_coding protein_coding MGP_BALBcJ_T0011494.1 MGP_BALBcJ_G0009619.1 mouse_genomes_project 2 140885018 140885322 + Gm23179 misc_RNA misc_RNA MGP_BALBcJ_T0007197.1 MGP_BALBcJ_G0005900.1 mouse_genomes_project 2 69250981 69262686 + Platr26 lincRNA lincRNA MGP_BALBcJ_T0007207.1 MGP_BALBcJ_G0005907.1 mouse_genomes_project 2 71467469 71475324 + Gm10822 lincRNA lincRNA MGP_BALBcJ_T0013840.1 MGP_BALBcJ_G0011937.1 mouse_genomes_project 2 164583425 164583786 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053572.1 MGP_BALBcJ_G0025510.1 mouse_genomes_project 2 26320739 26326800 + MGP_BALBcJ_P0053572 Setx protein_coding protein_coding MGP_BALBcJ_T0053573.1 MGP_BALBcJ_G0025510.1 mouse_genomes_project 2 26321546 26381021 + MGP_BALBcJ_P0053573 Setx protein_coding protein_coding MGP_BALBcJ_T0053574.1 MGP_BALBcJ_G0025510.1 mouse_genomes_project 2 26322440 26327004 + Setx protein_coding retained_intron MGP_BALBcJ_T0053575.1 MGP_BALBcJ_G0025510.1 mouse_genomes_project 2 26354679 26360222 + Setx protein_coding processed_transcript MGP_BALBcJ_T0053576.1 MGP_BALBcJ_G0025510.1 mouse_genomes_project 2 26361917 26377086 + MGP_BALBcJ_P0053576 Setx protein_coding protein_coding MGP_BALBcJ_T0058107.1 MGP_BALBcJ_G0026586.1 mouse_genomes_project 2 147236780 147248654 + MGP_BALBcJ_P0058107 Gzf1 protein_coding protein_coding MGP_BALBcJ_T0058108.1 MGP_BALBcJ_G0026586.1 mouse_genomes_project 2 147236968 147239807 + MGP_BALBcJ_P0058108 Gzf1 protein_coding protein_coding MGP_BALBcJ_T0058109.1 MGP_BALBcJ_G0026586.1 mouse_genomes_project 2 147240369 147245920 + Gzf1 protein_coding processed_transcript MGP_BALBcJ_T0013745.1 MGP_BALBcJ_G0011842.1 mouse_genomes_project 2 131130415 131131386 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058336.1 MGP_BALBcJ_G0026660.1 mouse_genomes_project 2 151648095 151672453 + MGP_BALBcJ_P0058336 Xkr7 protein_coding protein_coding MGP_BALBcJ_T0059893.1 MGP_BALBcJ_G0027005.1 mouse_genomes_project 2 180926965 180930960 - MGP_BALBcJ_P0059893 Samd10 protein_coding protein_coding MGP_BALBcJ_T0059894.1 MGP_BALBcJ_G0027005.1 mouse_genomes_project 2 180926968 180930946 - MGP_BALBcJ_P0059894 Samd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059895.1 MGP_BALBcJ_G0027005.1 mouse_genomes_project 2 180928539 180929354 - Samd10 protein_coding retained_intron MGP_BALBcJ_T0013813.1 MGP_BALBcJ_G0011910.1 mouse_genomes_project 2 155087833 155088317 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053258.1 MGP_BALBcJ_G0025452.1 mouse_genomes_project 2 23337770 23366127 - MGP_BALBcJ_P0053258 Qsox2 protein_coding protein_coding MGP_BALBcJ_T0053259.1 MGP_BALBcJ_G0025452.1 mouse_genomes_project 2 23337772 23366300 - MGP_BALBcJ_P0053259 Qsox2 protein_coding protein_coding MGP_BALBcJ_T0001055.1 MGP_BALBcJ_G0000983.1 mouse_genomes_project 2 30277611 30281694 - TEC TEC MGP_BALBcJ_T0007346.1 MGP_BALBcJ_G0006020.1 mouse_genomes_project 2 155609071 155615839 - Gm14230 lincRNA lincRNA MGP_BALBcJ_T0007347.1 MGP_BALBcJ_G0006020.1 mouse_genomes_project 2 155613840 155615911 - Gm14230 lincRNA lincRNA MGP_BALBcJ_T0007348.1 MGP_BALBcJ_G0006020.1 mouse_genomes_project 2 155614490 155615819 - Gm14230 lincRNA lincRNA MGP_BALBcJ_T0057445.1 MGP_BALBcJ_G0026429.1 mouse_genomes_project 2 125493513 125500679 - MGP_BALBcJ_P0057445 Ciao1 protein_coding protein_coding MGP_BALBcJ_T0057446.1 MGP_BALBcJ_G0026429.1 mouse_genomes_project 2 125495927 125499105 - Ciao1 protein_coding retained_intron MGP_BALBcJ_T0057447.1 MGP_BALBcJ_G0026429.1 mouse_genomes_project 2 125496054 125500679 - MGP_BALBcJ_P0057447 Ciao1 protein_coding protein_coding MGP_BALBcJ_T0057448.1 MGP_BALBcJ_G0026429.1 mouse_genomes_project 2 125498914 125500679 - MGP_BALBcJ_P0057448 Ciao1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010440.1 MGP_BALBcJ_G0008565.1 mouse_genomes_project 2 128399646 128399763 - Mir6339 miRNA miRNA MGP_BALBcJ_T0056374.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101176295 101216485 - MGP_BALBcJ_P0056374 Ehf protein_coding protein_coding MGP_BALBcJ_T0056375.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101176887 101216373 - MGP_BALBcJ_P0056375 Ehf protein_coding protein_coding MGP_BALBcJ_T0056376.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101179566 101196998 - MGP_BALBcJ_P0056376 Ehf protein_coding protein_coding MGP_BALBcJ_T0056377.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101179763 101187525 - Ehf protein_coding retained_intron MGP_BALBcJ_T0056378.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101180131 101212772 - MGP_BALBcJ_P0056378 Ehf protein_coding protein_coding MGP_BALBcJ_T0056379.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101187376 101204186 - MGP_BALBcJ_P0056379 Ehf protein_coding protein_coding MGP_BALBcJ_T0056380.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101190069 101216127 - MGP_BALBcJ_P0056380 Ehf protein_coding protein_coding MGP_BALBcJ_T0056381.1 MGP_BALBcJ_G0026172.1 mouse_genomes_project 2 101192390 101216374 - Ehf protein_coding retained_intron MGP_BALBcJ_T0007163.1 MGP_BALBcJ_G0005871.1 mouse_genomes_project 2 33530692 33531418 + Gm13431 lincRNA lincRNA MGP_BALBcJ_T0007164.1 MGP_BALBcJ_G0005871.1 mouse_genomes_project 2 33530740 33536841 + Gm13431 lincRNA lincRNA MGP_BALBcJ_T0007165.1 MGP_BALBcJ_G0005871.1 mouse_genomes_project 2 33534397 33536772 + Gm13431 lincRNA lincRNA MGP_BALBcJ_T0007252.1 MGP_BALBcJ_G0005944.1 mouse_genomes_project 2 97267879 97268364 - Gm29235 lincRNA lincRNA MGP_BALBcJ_T0013552.1 MGP_BALBcJ_G0011649.1 mouse_genomes_project 2 62003167 62003945 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055747.1 MGP_BALBcJ_G0025960.1 mouse_genomes_project 2 84620303 84621269 - MGP_BALBcJ_P0055747 Olfr1100 protein_coding protein_coding MGP_BALBcJ_T0007201.1 MGP_BALBcJ_G0005904.1 mouse_genomes_project 2 70258191 70285273 + 8430437L04Rik lincRNA lincRNA MGP_BALBcJ_T0004105.1 MGP_BALBcJ_G0003633.1 mouse_genomes_project 2 150131580 150133198 - Gm14167 antisense antisense MGP_BALBcJ_T0052992.1 MGP_BALBcJ_G0025399.1 mouse_genomes_project 2 22309916 22313458 - MGP_BALBcJ_P0052992 protein_coding protein_coding MGP_BALBcJ_T0052993.1 MGP_BALBcJ_G0025399.1 mouse_genomes_project 2 22312278 22313410 - protein_coding processed_transcript MGP_BALBcJ_T0013520.1 MGP_BALBcJ_G0011617.1 mouse_genomes_project 2 50059047 50059878 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058315.1 MGP_BALBcJ_G0026657.1 mouse_genomes_project 2 151550812 151561250 - MGP_BALBcJ_P0058315 Dusp15 protein_coding protein_coding MGP_BALBcJ_T0058316.1 MGP_BALBcJ_G0026657.1 mouse_genomes_project 2 151550837 151554372 - Dusp15 protein_coding retained_intron MGP_BALBcJ_T0058317.1 MGP_BALBcJ_G0026657.1 mouse_genomes_project 2 151554748 151561376 - MGP_BALBcJ_P0058317 Dusp15 protein_coding protein_coding MGP_BALBcJ_T0058318.1 MGP_BALBcJ_G0026657.1 mouse_genomes_project 2 151554792 151561492 - MGP_BALBcJ_P0058318 Dusp15 protein_coding protein_coding MGP_BALBcJ_T0058403.1 MGP_BALBcJ_G0026678.1 mouse_genomes_project 2 152576648 152591385 + MGP_BALBcJ_P0058403 Bpifb3 protein_coding protein_coding MGP_BALBcJ_T0058404.1 MGP_BALBcJ_G0026678.1 mouse_genomes_project 2 152576812 152591382 + MGP_BALBcJ_P0058404 Bpifb3 protein_coding protein_coding MGP_BALBcJ_T0055263.1 MGP_BALBcJ_G0025802.1 mouse_genomes_project 2 70025881 70036392 + MGP_BALBcJ_P0055263 Cdca7 protein_coding protein_coding MGP_BALBcJ_T0055264.1 MGP_BALBcJ_G0025802.1 mouse_genomes_project 2 70025975 70032220 + MGP_BALBcJ_P0055264 Cdca7 protein_coding protein_coding MGP_BALBcJ_T0055265.1 MGP_BALBcJ_G0025802.1 mouse_genomes_project 2 70026112 70031583 + Cdca7 protein_coding processed_transcript MGP_BALBcJ_T0055266.1 MGP_BALBcJ_G0025802.1 mouse_genomes_project 2 70033286 70034466 + Cdca7 protein_coding processed_transcript MGP_BALBcJ_T0055267.1 MGP_BALBcJ_G0025802.1 mouse_genomes_project 2 70034829 70035913 + Cdca7 protein_coding processed_transcript MGP_BALBcJ_T0013836.1 MGP_BALBcJ_G0011933.1 mouse_genomes_project 2 161760532 161761222 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055736.1 MGP_BALBcJ_G0025949.1 mouse_genomes_project 2 84307839 84308772 - MGP_BALBcJ_P0055736 Olfr1086 protein_coding protein_coding MGP_BALBcJ_T0013560.1 MGP_BALBcJ_G0011657.1 mouse_genomes_project 2 64403512 64404005 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055560.1 MGP_BALBcJ_G0025866.1 mouse_genomes_project 2 81367457 81433622 + MGP_BALBcJ_P0055560 Fam171b protein_coding protein_coding MGP_BALBcJ_T0055561.1 MGP_BALBcJ_G0025866.1 mouse_genomes_project 2 81416005 81418383 + Fam171b protein_coding processed_transcript MGP_BALBcJ_T0054936.1 MGP_BALBcJ_G0025740.1 mouse_genomes_project 2 59737913 59825375 - MGP_BALBcJ_P0054936 protein_coding protein_coding MGP_BALBcJ_T0054937.1 MGP_BALBcJ_G0025740.1 mouse_genomes_project 2 59742274 59756665 - protein_coding retained_intron MGP_BALBcJ_T0054938.1 MGP_BALBcJ_G0025740.1 mouse_genomes_project 2 59763944 59769397 - protein_coding processed_transcript MGP_BALBcJ_T0054939.1 MGP_BALBcJ_G0025740.1 mouse_genomes_project 2 59820845 59825003 - protein_coding processed_transcript MGP_BALBcJ_T0013852.1 MGP_BALBcJ_G0011949.1 mouse_genomes_project 2 169331526 169333324 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054842.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57223561 57255903 - MGP_BALBcJ_P0054842 Wdsub1 protein_coding protein_coding MGP_BALBcJ_T0054843.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57226384 57255866 - MGP_BALBcJ_P0054843 Wdsub1 protein_coding protein_coding MGP_BALBcJ_T0054844.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57234237 57235640 - Wdsub1 protein_coding processed_transcript MGP_BALBcJ_T0054845.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57234246 57234594 - Wdsub1 protein_coding processed_transcript MGP_BALBcJ_T0054846.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57234474 57250161 - MGP_BALBcJ_P0054846 Wdsub1 protein_coding protein_coding MGP_BALBcJ_T0054847.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57234601 57236475 - Wdsub1 protein_coding processed_transcript MGP_BALBcJ_T0054848.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57235586 57255876 - Wdsub1 protein_coding processed_transcript MGP_BALBcJ_T0054849.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57243666 57251483 - MGP_BALBcJ_P0054849 Wdsub1 protein_coding protein_coding MGP_BALBcJ_T0054850.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57246372 57251665 - Wdsub1 protein_coding processed_transcript MGP_BALBcJ_T0054851.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57249985 57255905 - MGP_BALBcJ_P0054851 Wdsub1 protein_coding protein_coding MGP_BALBcJ_T0054852.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57249986 57255893 - MGP_BALBcJ_P0054852 Wdsub1 protein_coding protein_coding MGP_BALBcJ_T0054853.1 MGP_BALBcJ_G0025728.1 mouse_genomes_project 2 57251650 57255910 - Wdsub1 protein_coding processed_transcript MGP_BALBcJ_T0098582.1 MGP_BALBcJ_G0036636.1 mouse_genomes_project 2 165122053 165122158 + Gm22687 rRNA rRNA MGP_BALBcJ_T0058231.1 MGP_BALBcJ_G0026622.1 mouse_genomes_project 2 150502629 150537420 + MGP_BALBcJ_P0058231 Angpt4 protein_coding protein_coding MGP_BALBcJ_T0004157.1 MGP_BALBcJ_G0003675.1 mouse_genomes_project 2 169552788 169567128 - Gm16796 antisense antisense MGP_BALBcJ_T0100981.1 MGP_BALBcJ_G0039017.1 mouse_genomes_project 2 128673436 128673522 + Gm23187 snoRNA snoRNA MGP_BALBcJ_T0055957.1 MGP_BALBcJ_G0026104.1 mouse_genomes_project 2 88654242 88658908 + MGP_BALBcJ_P0055957 C1qtnf4 protein_coding protein_coding MGP_BALBcJ_T0013759.1 MGP_BALBcJ_G0011856.1 mouse_genomes_project 2 139636148 139636934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013782.1 MGP_BALBcJ_G0011879.1 mouse_genomes_project 2 145953371 145953680 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099657.1 MGP_BALBcJ_G0037693.1 mouse_genomes_project 2 4341552 4341649 + Gm24340 snRNA snRNA MGP_BALBcJ_T0054854.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57272609 57384243 - MGP_BALBcJ_P0054854 Baz2b protein_coding unknown_likely_coding MGP_BALBcJ_T0054855.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57272613 57503021 - MGP_BALBcJ_P0054855 Baz2b protein_coding protein_coding MGP_BALBcJ_T0054856.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57272695 57380723 - MGP_BALBcJ_P0054856 Baz2b protein_coding protein_coding MGP_BALBcJ_T0054857.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57276435 57285787 - MGP_BALBcJ_P0054857 Baz2b protein_coding protein_coding MGP_BALBcJ_T0054858.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57287430 57297182 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054859.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57290160 57293801 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054860.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57297971 57322802 - MGP_BALBcJ_P0054860 Baz2b protein_coding protein_coding MGP_BALBcJ_T0054861.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57328047 57334629 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054862.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57352942 57503064 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054863.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57358062 57465137 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054864.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57379084 57502916 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054865.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57451874 57588693 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054866.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57584600 57588655 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054867.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57585067 57588013 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0054868.1 MGP_BALBcJ_G0025729.1 mouse_genomes_project 2 57585068 57588602 - Baz2b protein_coding processed_transcript MGP_BALBcJ_T0053006.1 MGP_BALBcJ_G0025403.1 mouse_genomes_project 2 22331493 22332636 + MGP_BALBcJ_P0053006 Rnf208 protein_coding protein_coding MGP_BALBcJ_T0053007.1 MGP_BALBcJ_G0025403.1 mouse_genomes_project 2 22331572 22333500 + MGP_BALBcJ_P0053007 Rnf208 protein_coding protein_coding MGP_BALBcJ_T0053008.1 MGP_BALBcJ_G0025403.1 mouse_genomes_project 2 22332176 22333501 + MGP_BALBcJ_P0053008 Rnf208 protein_coding protein_coding MGP_BALBcJ_T0059005.1 MGP_BALBcJ_G0026795.1 mouse_genomes_project 2 162207733 162270142 - MGP_BALBcJ_P0059005 Jph2 protein_coding protein_coding MGP_BALBcJ_T0059006.1 MGP_BALBcJ_G0026795.1 mouse_genomes_project 2 162207733 162270186 - MGP_BALBcJ_P0059006 Jph2 protein_coding protein_coding MGP_BALBcJ_T0056489.1 MGP_BALBcJ_G0026196.1 mouse_genomes_project 2 103040055 103041796 + MGP_BALBcJ_P0056489 Gm11060 protein_coding protein_coding MGP_BALBcJ_T0099665.1 MGP_BALBcJ_G0037701.1 mouse_genomes_project 2 24694491 24694681 - Gm25541 snRNA snRNA MGP_BALBcJ_T0004141.1 MGP_BALBcJ_G0003663.1 mouse_genomes_project 2 163044240 163063767 + A730032A03Rik antisense antisense MGP_BALBcJ_T0004142.1 MGP_BALBcJ_G0003663.1 mouse_genomes_project 2 163059969 163063767 + A730032A03Rik antisense antisense MGP_BALBcJ_T0058035.1 MGP_BALBcJ_G0026569.1 mouse_genomes_project 2 143685608 144159429 + MGP_BALBcJ_P0058035 Slc24a3 protein_coding protein_coding MGP_BALBcJ_T0058036.1 MGP_BALBcJ_G0026569.1 mouse_genomes_project 2 143685773 144036119 + Slc24a3 protein_coding processed_transcript MGP_BALBcJ_T0058037.1 MGP_BALBcJ_G0026569.1 mouse_genomes_project 2 143758686 144159429 + Slc24a3 protein_coding processed_transcript MGP_BALBcJ_T0058038.1 MGP_BALBcJ_G0026569.1 mouse_genomes_project 2 143761047 144157631 + MGP_BALBcJ_P0058038 Slc24a3 protein_coding protein_coding MGP_BALBcJ_T0058039.1 MGP_BALBcJ_G0026569.1 mouse_genomes_project 2 144125306 144133018 + Slc24a3 protein_coding processed_transcript MGP_BALBcJ_T0011499.1 MGP_BALBcJ_G0009624.1 mouse_genomes_project 2 155636591 155636837 + Gm27651 misc_RNA misc_RNA MGP_BALBcJ_T0098716.1 MGP_BALBcJ_G0036770.1 mouse_genomes_project 2 105060834 105061104 - Gm24885 ribozyme ribozyme MGP_BALBcJ_T0055851.1 MGP_BALBcJ_G0026050.1 mouse_genomes_project 2 86818642 86819578 - MGP_BALBcJ_P0055851 Olfr1216 protein_coding protein_coding MGP_BALBcJ_T0054940.1 MGP_BALBcJ_G0025741.1 mouse_genomes_project 2 59889106 59898227 - MGP_BALBcJ_P0054940 Gcg protein_coding protein_coding MGP_BALBcJ_T0054941.1 MGP_BALBcJ_G0025741.1 mouse_genomes_project 2 59890309 59898222 - MGP_BALBcJ_P0054941 Gcg protein_coding protein_coding MGP_BALBcJ_T0054942.1 MGP_BALBcJ_G0025741.1 mouse_genomes_project 2 59891147 59895255 - Gcg protein_coding processed_transcript MGP_BALBcJ_T0017738.1 MGP_BALBcJ_G0015358.1 mouse_genomes_project 2 54565780 54616762 - BB557941 processed_transcript processed_transcript MGP_BALBcJ_T0052990.1 MGP_BALBcJ_G0025398.1 mouse_genomes_project 2 22306382 22311854 + MGP_BALBcJ_P0052990 Fam166a protein_coding protein_coding MGP_BALBcJ_T0052991.1 MGP_BALBcJ_G0025398.1 mouse_genomes_project 2 22309114 22311854 + Fam166a protein_coding processed_transcript MGP_BALBcJ_T0059626.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179335067 179336079 - Psma7 protein_coding retained_intron MGP_BALBcJ_T0059627.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179335068 179341110 - Psma7 protein_coding retained_intron MGP_BALBcJ_T0059628.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179335068 179341148 - MGP_BALBcJ_P0059628 Psma7 protein_coding protein_coding MGP_BALBcJ_T0059629.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179335513 179336183 - Psma7 protein_coding retained_intron MGP_BALBcJ_T0059630.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179336330 179337519 - Psma7 protein_coding retained_intron MGP_BALBcJ_T0059631.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179336766 179338843 - Psma7 protein_coding retained_intron MGP_BALBcJ_T0059632.1 MGP_BALBcJ_G0026958.1 mouse_genomes_project 2 179337993 179341100 - Psma7 protein_coding processed_transcript MGP_BALBcJ_T0013712.1 MGP_BALBcJ_G0011809.1 mouse_genomes_project 2 117718572 117718958 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056657.1 MGP_BALBcJ_G0026265.1 mouse_genomes_project 2 110458319 110479285 + MGP_BALBcJ_P0056657 Emc7 protein_coding protein_coding MGP_BALBcJ_T0055726.1 MGP_BALBcJ_G0025940.1 mouse_genomes_project 2 83935495 83936437 - MGP_BALBcJ_P0055726 Olfr1056 protein_coding protein_coding MGP_BALBcJ_T0007295.1 MGP_BALBcJ_G0005977.1 mouse_genomes_project 2 118589493 118596190 + Gm26899 lincRNA lincRNA MGP_BALBcJ_T0057091.1 MGP_BALBcJ_G0026355.1 mouse_genomes_project 2 119173513 119186929 - MGP_BALBcJ_P0057091 Lcmt2 protein_coding protein_coding MGP_BALBcJ_T0057092.1 MGP_BALBcJ_G0026355.1 mouse_genomes_project 2 119184147 119187204 - MGP_BALBcJ_P0057092 Lcmt2 protein_coding protein_coding MGP_BALBcJ_T0001096.1 MGP_BALBcJ_G0001023.1 mouse_genomes_project 2 155622388 155625734 - TEC TEC MGP_BALBcJ_T0058260.1 MGP_BALBcJ_G0026631.1 mouse_genomes_project 2 150928822 150936078 - MGP_BALBcJ_P0058260 Trib3 protein_coding protein_coding MGP_BALBcJ_T0058261.1 MGP_BALBcJ_G0026631.1 mouse_genomes_project 2 150931148 150936034 - Trib3 protein_coding processed_transcript MGP_BALBcJ_T0058262.1 MGP_BALBcJ_G0026631.1 mouse_genomes_project 2 150935011 150936016 - Trib3 protein_coding retained_intron MGP_BALBcJ_T0059356.1 MGP_BALBcJ_G0026885.1 mouse_genomes_project 2 166056114 166142552 - MGP_BALBcJ_P0059356 Kcnb1 protein_coding protein_coding MGP_BALBcJ_T0017822.1 MGP_BALBcJ_G0015404.1 mouse_genomes_project 2 123363093 123372733 - Gm14004 processed_transcript processed_transcript MGP_BALBcJ_T0058897.1 MGP_BALBcJ_G0026771.1 mouse_genomes_project 2 157333023 157372148 + MGP_BALBcJ_P0058897 Arhgap40 protein_coding protein_coding MGP_BALBcJ_T0058898.1 MGP_BALBcJ_G0026771.1 mouse_genomes_project 2 157333023 157372293 + MGP_BALBcJ_P0058898 Arhgap40 protein_coding protein_coding MGP_BALBcJ_T0058899.1 MGP_BALBcJ_G0026771.1 mouse_genomes_project 2 157363292 157372293 + Arhgap40 protein_coding retained_intron MGP_BALBcJ_T0011497.1 MGP_BALBcJ_G0009622.1 mouse_genomes_project 2 145856542 145857000 + Nkx2-2os misc_RNA misc_RNA MGP_BALBcJ_T0003920.1 MGP_BALBcJ_G0003501.1 mouse_genomes_project 2 25734781 25750214 + Gm13381 antisense antisense MGP_BALBcJ_T0003921.1 MGP_BALBcJ_G0003501.1 mouse_genomes_project 2 25735114 25750496 + Gm13381 antisense antisense MGP_BALBcJ_T0058020.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143080911 143093358 + MGP_BALBcJ_P0058020 Sec23b protein_coding protein_coding MGP_BALBcJ_T0058021.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143080938 143115968 + MGP_BALBcJ_P0058021 Sec23b protein_coding protein_coding MGP_BALBcJ_T0058022.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143080963 143084782 + MGP_BALBcJ_P0058022 Sec23b protein_coding protein_coding MGP_BALBcJ_T0058023.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143080994 143084891 + Sec23b protein_coding processed_transcript MGP_BALBcJ_T0058024.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143081001 143092141 + MGP_BALBcJ_P0058024 Sec23b protein_coding protein_coding MGP_BALBcJ_T0058025.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143081016 143089983 + MGP_BALBcJ_P0058025 Sec23b protein_coding protein_coding MGP_BALBcJ_T0058026.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143090229 143115968 + Sec23b protein_coding processed_transcript MGP_BALBcJ_T0058027.1 MGP_BALBcJ_G0026565.1 mouse_genomes_project 2 143102453 143106418 + Sec23b protein_coding processed_transcript MGP_BALBcJ_T0053615.1 MGP_BALBcJ_G0025516.1 mouse_genomes_project 2 26989982 27000415 + MGP_BALBcJ_P0053615 Coq4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053616.1 MGP_BALBcJ_G0025516.1 mouse_genomes_project 2 26990709 26999082 + MGP_BALBcJ_P0053616 Coq4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053617.1 MGP_BALBcJ_G0025516.1 mouse_genomes_project 2 26990748 27000223 + MGP_BALBcJ_P0053617 Coq4 protein_coding protein_coding MGP_BALBcJ_T0053618.1 MGP_BALBcJ_G0025516.1 mouse_genomes_project 2 26990760 26998482 + MGP_BALBcJ_P0053618 Coq4 protein_coding protein_coding MGP_BALBcJ_T0053619.1 MGP_BALBcJ_G0025516.1 mouse_genomes_project 2 26992466 26993128 + Coq4 protein_coding retained_intron MGP_BALBcJ_T0053620.1 MGP_BALBcJ_G0025516.1 mouse_genomes_project 2 26998044 26999466 + Coq4 protein_coding retained_intron MGP_BALBcJ_T0056726.1 MGP_BALBcJ_G0026281.1 mouse_genomes_project 2 114881562 114894957 + MGP_BALBcJ_P0056726 Tmco5 protein_coding protein_coding MGP_BALBcJ_T0056727.1 MGP_BALBcJ_G0026281.1 mouse_genomes_project 2 114881565 114894913 + MGP_BALBcJ_P0056727 Tmco5 protein_coding protein_coding MGP_BALBcJ_T0056728.1 MGP_BALBcJ_G0026281.1 mouse_genomes_project 2 114881579 114895270 + MGP_BALBcJ_P0056728 Tmco5 protein_coding protein_coding MGP_BALBcJ_T0056729.1 MGP_BALBcJ_G0026281.1 mouse_genomes_project 2 114890984 114895270 + Tmco5 protein_coding processed_transcript MGP_BALBcJ_T0054418.1 MGP_BALBcJ_G0025633.1 mouse_genomes_project 2 33360083 33392841 + MGP_BALBcJ_P0054418 Morn5 protein_coding protein_coding MGP_BALBcJ_T0056319.1 MGP_BALBcJ_G0026161.1 mouse_genomes_project 2 99580972 99588765 + Traf6 protein_coding processed_transcript MGP_BALBcJ_T0056320.1 MGP_BALBcJ_G0026161.1 mouse_genomes_project 2 99580983 99604219 + MGP_BALBcJ_P0056320 Traf6 protein_coding protein_coding MGP_BALBcJ_T0056321.1 MGP_BALBcJ_G0026161.1 mouse_genomes_project 2 99581108 99600049 + MGP_BALBcJ_P0056321 Traf6 protein_coding unknown_likely_coding MGP_BALBcJ_T0056322.1 MGP_BALBcJ_G0026161.1 mouse_genomes_project 2 99586744 99592615 + Traf6 protein_coding processed_transcript MGP_BALBcJ_T0007265.1 MGP_BALBcJ_G0005954.1 mouse_genomes_project 2 104424907 104485901 - Gm14015 lincRNA lincRNA MGP_BALBcJ_T0017703.1 MGP_BALBcJ_G0015338.1 mouse_genomes_project 2 21499708 21548259 + Gm13415 processed_transcript antisense MGP_BALBcJ_T0017704.1 MGP_BALBcJ_G0015338.1 mouse_genomes_project 2 21502125 21524609 + Gm13415 processed_transcript antisense MGP_BALBcJ_T0017705.1 MGP_BALBcJ_G0015338.1 mouse_genomes_project 2 21502139 21504555 + Gm13415 processed_transcript retained_intron MGP_BALBcJ_T0055890.1 MGP_BALBcJ_G0026080.1 mouse_genomes_project 2 87580582 87585347 - MGP_BALBcJ_P0055890 Olfr1254 protein_coding protein_coding MGP_BALBcJ_T0055891.1 MGP_BALBcJ_G0026080.1 mouse_genomes_project 2 87580582 87581527 - MGP_BALBcJ_P0055891 Olfr1254 protein_coding protein_coding MGP_BALBcJ_T0056684.1 MGP_BALBcJ_G0026273.1 mouse_genomes_project 2 111807356 111822506 - MGP_BALBcJ_P0056684 Arhgap11a protein_coding protein_coding MGP_BALBcJ_T0056685.1 MGP_BALBcJ_G0026273.1 mouse_genomes_project 2 111807644 111822714 - MGP_BALBcJ_P0056685 Arhgap11a protein_coding protein_coding MGP_BALBcJ_T0056586.1 MGP_BALBcJ_G0026215.1 mouse_genomes_project 2 108287305 108289572 - MGP_BALBcJ_P0056586 Fibin protein_coding protein_coding MGP_BALBcJ_T0010418.1 MGP_BALBcJ_G0008543.1 mouse_genomes_project 2 91259960 91260039 - Mir7001 miRNA miRNA MGP_BALBcJ_T0053211.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22982355 23036159 + MGP_BALBcJ_P0053211 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053212.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22982416 23007898 + Kcnt1 protein_coding retained_intron MGP_BALBcJ_T0053213.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22982475 23035231 + MGP_BALBcJ_P0053213 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053214.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22982589 23035231 + MGP_BALBcJ_P0053214 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053215.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22996739 23036677 + MGP_BALBcJ_P0053215 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053216.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22996813 23014131 + Kcnt1 protein_coding retained_intron MGP_BALBcJ_T0053217.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22996819 23035725 + MGP_BALBcJ_P0053217 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053218.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22996826 23036194 + Kcnt1 protein_coding retained_intron MGP_BALBcJ_T0053219.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22996829 23037387 + MGP_BALBcJ_P0053219 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053220.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 22996837 23035231 + MGP_BALBcJ_P0053220 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053221.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 23013298 23035706 + Kcnt1 protein_coding retained_intron MGP_BALBcJ_T0053222.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 23019846 23022429 + MGP_BALBcJ_P0053222 Kcnt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053223.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 23022535 23029023 + MGP_BALBcJ_P0053223 Kcnt1 protein_coding protein_coding MGP_BALBcJ_T0053224.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 23027096 23036037 + Kcnt1 protein_coding retained_intron MGP_BALBcJ_T0053225.1 MGP_BALBcJ_G0025447.1 mouse_genomes_project 2 23030007 23035354 + Kcnt1 protein_coding retained_intron MGP_BALBcJ_T0003971.1 MGP_BALBcJ_G0003541.1 mouse_genomes_project 2 62956177 62959518 + Gm13595 antisense antisense MGP_BALBcJ_T0056770.1 MGP_BALBcJ_G0026292.1 mouse_genomes_project 2 116692813 116727936 + MGP_BALBcJ_P0056770 Pak6 protein_coding protein_coding MGP_BALBcJ_T0056771.1 MGP_BALBcJ_G0026292.1 mouse_genomes_project 2 116693272 116694466 + Pak6 protein_coding retained_intron MGP_BALBcJ_T0056772.1 MGP_BALBcJ_G0026292.1 mouse_genomes_project 2 116693574 116707177 + Pak6 protein_coding processed_transcript MGP_BALBcJ_T0056773.1 MGP_BALBcJ_G0026292.1 mouse_genomes_project 2 116706635 116727934 + MGP_BALBcJ_P0056773 Pak6 protein_coding protein_coding MGP_BALBcJ_T0056774.1 MGP_BALBcJ_G0026292.1 mouse_genomes_project 2 116706669 116727120 + Pak6 protein_coding retained_intron MGP_BALBcJ_T0058822.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156220720 156273232 + MGP_BALBcJ_P0058822 Src protein_coding protein_coding MGP_BALBcJ_T0058823.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156226393 156257227 + Src protein_coding processed_transcript MGP_BALBcJ_T0058824.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156226557 156273259 + MGP_BALBcJ_P0058824 Src protein_coding protein_coding MGP_BALBcJ_T0058825.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156226570 156273235 + MGP_BALBcJ_P0058825 Src protein_coding protein_coding MGP_BALBcJ_T0058826.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156226669 156259981 + Src protein_coding processed_transcript MGP_BALBcJ_T0058827.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156226669 156257126 + Src protein_coding processed_transcript MGP_BALBcJ_T0058828.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156257190 156273235 + MGP_BALBcJ_P0058828 Src protein_coding protein_coding MGP_BALBcJ_T0058829.1 MGP_BALBcJ_G0026757.1 mouse_genomes_project 2 156258474 156271757 + MGP_BALBcJ_P0058829 Src protein_coding protein_coding MGP_BALBcJ_T0055914.1 MGP_BALBcJ_G0026095.1 mouse_genomes_project 2 87931137 87932052 - MGP_BALBcJ_P0055914 Olfr1270 protein_coding protein_coding MGP_BALBcJ_T0056653.1 MGP_BALBcJ_G0026263.1 mouse_genomes_project 2 110370221 110375346 - MGP_BALBcJ_P0056653 Emc4 protein_coding protein_coding MGP_BALBcJ_T0056654.1 MGP_BALBcJ_G0026263.1 mouse_genomes_project 2 110371111 110375339 - Emc4 protein_coding processed_transcript MGP_BALBcJ_T0001035.1 MGP_BALBcJ_G0000963.1 mouse_genomes_project 2 10234384 10236258 - TEC TEC MGP_BALBcJ_T0013644.1 MGP_BALBcJ_G0011741.1 mouse_genomes_project 2 90703703 90704126 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055008.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63289904 63484217 + MGP_BALBcJ_P0055008 Csrnp3 protein_coding protein_coding MGP_BALBcJ_T0055009.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63289979 63478277 + MGP_BALBcJ_P0055009 Csrnp3 protein_coding protein_coding MGP_BALBcJ_T0055010.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63289982 63327233 + Csrnp3 protein_coding retained_intron MGP_BALBcJ_T0055011.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63289992 63475950 + MGP_BALBcJ_P0055011 Csrnp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055012.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63307779 63401579 + Csrnp3 protein_coding retained_intron MGP_BALBcJ_T0055013.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63379169 63476617 + MGP_BALBcJ_P0055013 Csrnp3 protein_coding protein_coding MGP_BALBcJ_T0055014.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63380897 63476155 + MGP_BALBcJ_P0055014 Csrnp3 protein_coding protein_coding MGP_BALBcJ_T0055015.1 MGP_BALBcJ_G0025752.1 mouse_genomes_project 2 63401088 63475724 + MGP_BALBcJ_P0055015 Csrnp3 protein_coding protein_coding MGP_BALBcJ_T0013439.1 MGP_BALBcJ_G0011536.1 mouse_genomes_project 2 20028959 20029496 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056337.1 MGP_BALBcJ_G0026164.1 mouse_genomes_project 2 99855350 100091320 - MGP_BALBcJ_P0056337 Ldlrad3 protein_coding protein_coding MGP_BALBcJ_T0056338.1 MGP_BALBcJ_G0026164.1 mouse_genomes_project 2 99855350 100091293 - MGP_BALBcJ_P0056338 Ldlrad3 protein_coding protein_coding MGP_BALBcJ_T0056339.1 MGP_BALBcJ_G0026164.1 mouse_genomes_project 2 100014889 100041877 - Ldlrad3 protein_coding processed_transcript MGP_BALBcJ_T0013750.1 MGP_BALBcJ_G0011847.1 mouse_genomes_project 2 134869075 134869717 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053444.1 MGP_BALBcJ_G0025484.1 mouse_genomes_project 2 24308907 24327398 + MGP_BALBcJ_P0053444 Dbh protein_coding protein_coding MGP_BALBcJ_T0053445.1 MGP_BALBcJ_G0025484.1 mouse_genomes_project 2 24321290 24321570 + Dbh protein_coding processed_transcript MGP_BALBcJ_T0055348.1 MGP_BALBcJ_G0025819.1 mouse_genomes_project 2 72247736 72254987 + Hoxd11 protein_coding processed_transcript MGP_BALBcJ_T0055349.1 MGP_BALBcJ_G0025819.1 mouse_genomes_project 2 72250502 72252143 + MGP_BALBcJ_P0055349 Hoxd11 protein_coding protein_coding MGP_BALBcJ_T0100984.1 MGP_BALBcJ_G0039020.1 mouse_genomes_project 2 141305236 141305352 + Gm22310 snoRNA snoRNA MGP_BALBcJ_T0007325.1 MGP_BALBcJ_G0006003.1 mouse_genomes_project 2 145873748 145875271 - Gm14110 lincRNA lincRNA MGP_BALBcJ_T0058283.1 MGP_BALBcJ_G0026648.1 mouse_genomes_project 2 151228862 151237766 + MGP_BALBcJ_P0058283 Rem1 protein_coding protein_coding MGP_BALBcJ_T0058284.1 MGP_BALBcJ_G0026648.1 mouse_genomes_project 2 151228864 151230219 + MGP_BALBcJ_P0058284 Rem1 protein_coding protein_coding MGP_BALBcJ_T0058285.1 MGP_BALBcJ_G0026648.1 mouse_genomes_project 2 151234878 151237770 + Rem1 protein_coding retained_intron MGP_BALBcJ_T0057019.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622059 118655793 + MGP_BALBcJ_P0057019 Snap23 protein_coding protein_coding MGP_BALBcJ_T0057020.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622079 118655793 + MGP_BALBcJ_P0057020 Snap23 protein_coding protein_coding MGP_BALBcJ_T0057021.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622085 118655793 + MGP_BALBcJ_P0057021 Snap23 protein_coding protein_coding MGP_BALBcJ_T0057022.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622109 118651306 + MGP_BALBcJ_P0057022 Snap23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057023.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622111 118639492 + Snap23 protein_coding retained_intron MGP_BALBcJ_T0057024.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622111 118640784 + MGP_BALBcJ_P0057024 Snap23 protein_coding protein_coding MGP_BALBcJ_T0057025.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118622126 118651219 + MGP_BALBcJ_P0057025 Snap23 protein_coding protein_coding MGP_BALBcJ_T0057026.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118640757 118649938 + Snap23 protein_coding retained_intron MGP_BALBcJ_T0057027.1 MGP_BALBcJ_G0026343.1 mouse_genomes_project 2 118645032 118651301 + Snap23 protein_coding processed_transcript MGP_BALBcJ_T0099678.1 MGP_BALBcJ_G0037714.1 mouse_genomes_project 2 68949658 68949759 - Gm23166 snRNA snRNA MGP_BALBcJ_T0055906.1 MGP_BALBcJ_G0026088.1 mouse_genomes_project 2 87782539 87786952 + MGP_BALBcJ_P0055906 protein_coding protein_coding MGP_BALBcJ_T0013521.1 MGP_BALBcJ_G0011618.1 mouse_genomes_project 2 50844138 50845117 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004150.1 MGP_BALBcJ_G0003668.1 mouse_genomes_project 2 164803184 164805205 + Gm11465 antisense antisense MGP_BALBcJ_T0052386.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2842239 2866556 - MGP_BALBcJ_P0052386 Sec61a2 protein_coding protein_coding MGP_BALBcJ_T0052387.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2842281 2866458 - MGP_BALBcJ_P0052387 Sec61a2 protein_coding protein_coding MGP_BALBcJ_T0052388.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2842847 2847731 - MGP_BALBcJ_P0052388 Sec61a2 protein_coding protein_coding MGP_BALBcJ_T0052389.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2843245 2846049 - Sec61a2 protein_coding processed_transcript MGP_BALBcJ_T0052390.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2844663 2845543 - Sec61a2 protein_coding processed_transcript MGP_BALBcJ_T0052391.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2845050 2848295 - Sec61a2 protein_coding processed_transcript MGP_BALBcJ_T0052392.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2847676 2849262 - Sec61a2 protein_coding processed_transcript MGP_BALBcJ_T0052393.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2847744 2849643 - Sec61a2 protein_coding processed_transcript MGP_BALBcJ_T0052394.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2849126 2866443 - MGP_BALBcJ_P0052394 Sec61a2 protein_coding protein_coding MGP_BALBcJ_T0052395.1 MGP_BALBcJ_G0025299.1 mouse_genomes_project 2 2853068 2866458 - Sec61a2 protein_coding retained_intron MGP_BALBcJ_T0007113.1 MGP_BALBcJ_G0005834.1 mouse_genomes_project 2 6347729 6406098 + Gm13219 lincRNA lincRNA MGP_BALBcJ_T0007114.1 MGP_BALBcJ_G0005834.1 mouse_genomes_project 2 6347788 6444074 + Gm13219 lincRNA lincRNA MGP_BALBcJ_T0007115.1 MGP_BALBcJ_G0005834.1 mouse_genomes_project 2 6347818 6407459 + Gm13219 lincRNA lincRNA MGP_BALBcJ_T0010457.1 MGP_BALBcJ_G0008582.1 mouse_genomes_project 2 157569094 157569220 + Gm26141 miRNA miRNA MGP_BALBcJ_T0058459.1 MGP_BALBcJ_G0026694.1 mouse_genomes_project 2 153257000 153269042 - MGP_BALBcJ_P0058459 E2f1 protein_coding protein_coding MGP_BALBcJ_T0058460.1 MGP_BALBcJ_G0026694.1 mouse_genomes_project 2 153257227 153268870 - MGP_BALBcJ_P0058460 E2f1 protein_coding protein_coding MGP_BALBcJ_T0099704.1 MGP_BALBcJ_G0037740.1 mouse_genomes_project 2 138074660 138074764 + Gm27385 snRNA snRNA MGP_BALBcJ_T0013407.1 MGP_BALBcJ_G0011504.1 mouse_genomes_project 2 11747749 11748466 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001087.1 MGP_BALBcJ_G0001015.1 mouse_genomes_project 2 114083509 114084445 - TEC TEC MGP_BALBcJ_T0007384.1 MGP_BALBcJ_G0006052.1 mouse_genomes_project 2 168003582 168004390 - Gm14260 lincRNA lincRNA MGP_BALBcJ_T0057290.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120965509 121009876 + MGP_BALBcJ_P0057290 Sqrdl protein_coding protein_coding MGP_BALBcJ_T0057291.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120965661 120986217 + MGP_BALBcJ_P0057291 Sqrdl protein_coding protein_coding MGP_BALBcJ_T0057292.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120965663 120986224 + MGP_BALBcJ_P0057292 Sqrdl protein_coding protein_coding MGP_BALBcJ_T0057293.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120965681 120968812 + Sqrdl protein_coding processed_transcript MGP_BALBcJ_T0057294.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120972338 121000451 + Sqrdl protein_coding retained_intron MGP_BALBcJ_T0057295.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120983111 121009860 + MGP_BALBcJ_P0057295 Sqrdl protein_coding protein_coding MGP_BALBcJ_T0057296.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120986072 120989092 + Sqrdl protein_coding processed_transcript MGP_BALBcJ_T0057297.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120986089 121009645 + MGP_BALBcJ_P0057297 Sqrdl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057298.1 MGP_BALBcJ_G0026395.1 mouse_genomes_project 2 120999443 121009866 + MGP_BALBcJ_P0057298 Sqrdl protein_coding protein_coding MGP_BALBcJ_T0055137.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67360909 67488918 + MGP_BALBcJ_P0055137 Ubr3 protein_coding protein_coding MGP_BALBcJ_T0055138.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67360909 67488918 + MGP_BALBcJ_P0055138 Ubr3 protein_coding protein_coding MGP_BALBcJ_T0055139.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67360966 67403482 + MGP_BALBcJ_P0055139 Ubr3 protein_coding protein_coding MGP_BALBcJ_T0055140.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67400843 67410123 + Ubr3 protein_coding processed_transcript MGP_BALBcJ_T0055141.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67453791 67474093 + MGP_BALBcJ_P0055141 Ubr3 protein_coding protein_coding MGP_BALBcJ_T0055142.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67458743 67487450 + Ubr3 protein_coding processed_transcript MGP_BALBcJ_T0055143.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67465504 67474231 + Ubr3 protein_coding processed_transcript MGP_BALBcJ_T0055144.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67473911 67481370 + Ubr3 protein_coding processed_transcript MGP_BALBcJ_T0055145.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67485032 67486091 + Ubr3 protein_coding processed_transcript MGP_BALBcJ_T0055146.1 MGP_BALBcJ_G0025781.1 mouse_genomes_project 2 67485416 67487125 + Ubr3 protein_coding processed_transcript MGP_BALBcJ_T0007350.1 MGP_BALBcJ_G0006022.1 mouse_genomes_project 2 157179784 157179916 - Gm23925 lincRNA lincRNA MGP_BALBcJ_T0013799.1 MGP_BALBcJ_G0011896.1 mouse_genomes_project 2 151053999 151054307 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058710.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 154962846 155020198 + MGP_BALBcJ_P0058710 Phf20 protein_coding protein_coding MGP_BALBcJ_T0058711.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 154963022 155075251 + MGP_BALBcJ_P0058711 Phf20 protein_coding protein_coding MGP_BALBcJ_T0058712.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 154963114 155075249 + Phf20 protein_coding processed_transcript MGP_BALBcJ_T0058713.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 154963134 154991186 + Phf20 protein_coding retained_intron MGP_BALBcJ_T0058714.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 154963136 155020400 + Phf20 protein_coding retained_intron MGP_BALBcJ_T0058715.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 154990151 155017713 + Phf20 protein_coding processed_transcript MGP_BALBcJ_T0058716.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 155029055 155038513 + Phf20 protein_coding processed_transcript MGP_BALBcJ_T0058717.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 155048038 155057854 + Phf20 protein_coding processed_transcript MGP_BALBcJ_T0058718.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 155059074 155063934 + Phf20 protein_coding retained_intron MGP_BALBcJ_T0058719.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 155061358 155064026 + Phf20 protein_coding processed_transcript MGP_BALBcJ_T0058720.1 MGP_BALBcJ_G0026736.1 mouse_genomes_project 2 155061735 155069990 + Phf20 protein_coding processed_transcript MGP_BALBcJ_T0013617.1 MGP_BALBcJ_G0011714.1 mouse_genomes_project 2 84771363 84771898 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057375.1 MGP_BALBcJ_G0026415.1 mouse_genomes_project 2 124781729 124820053 + MGP_BALBcJ_P0057375 Slc27a2 protein_coding protein_coding MGP_BALBcJ_T0057376.1 MGP_BALBcJ_G0026415.1 mouse_genomes_project 2 124782912 124794250 + Slc27a2 protein_coding processed_transcript MGP_BALBcJ_T0057377.1 MGP_BALBcJ_G0026415.1 mouse_genomes_project 2 124785450 124819745 + MGP_BALBcJ_P0057377 Slc27a2 protein_coding protein_coding MGP_BALBcJ_T0057378.1 MGP_BALBcJ_G0026415.1 mouse_genomes_project 2 124794324 124805004 + Slc27a2 protein_coding processed_transcript MGP_BALBcJ_T0017691.1 MGP_BALBcJ_G0015331.1 mouse_genomes_project 2 7361562 7396730 - Gm13261 processed_transcript processed_transcript MGP_BALBcJ_T0007268.1 MGP_BALBcJ_G0005957.1 mouse_genomes_project 2 106954545 106957298 + Gm13923 lincRNA lincRNA MGP_BALBcJ_T0053151.1 MGP_BALBcJ_G0025426.1 mouse_genomes_project 2 22617427 22655072 - MGP_BALBcJ_P0053151 Traf2 protein_coding protein_coding MGP_BALBcJ_T0053152.1 MGP_BALBcJ_G0025426.1 mouse_genomes_project 2 22618311 22647083 - Traf2 protein_coding retained_intron MGP_BALBcJ_T0053153.1 MGP_BALBcJ_G0025426.1 mouse_genomes_project 2 22618311 22655042 - MGP_BALBcJ_P0053153 Traf2 protein_coding protein_coding MGP_BALBcJ_T0011466.1 MGP_BALBcJ_G0009591.1 mouse_genomes_project 2 10305181 10305368 + Gm27540 misc_RNA misc_RNA MGP_BALBcJ_T0013397.1 MGP_BALBcJ_G0011494.1 mouse_genomes_project 2 6259414 6259844 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013781.1 MGP_BALBcJ_G0011878.1 mouse_genomes_project 2 145834520 145835705 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059115.1 MGP_BALBcJ_G0026833.1 mouse_genomes_project 2 163462431 163466169 - MGP_BALBcJ_P0059115 Spint3 protein_coding protein_coding MGP_BALBcJ_T0054988.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62761286 62808586 - MGP_BALBcJ_P0054988 Slc38a11 protein_coding protein_coding MGP_BALBcJ_T0054989.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62761341 62809042 - MGP_BALBcJ_P0054989 Slc38a11 protein_coding protein_coding MGP_BALBcJ_T0054990.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62766993 62809157 - MGP_BALBcJ_P0054990 Slc38a11 protein_coding protein_coding MGP_BALBcJ_T0054991.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62794512 62809157 - Slc38a11 protein_coding processed_transcript MGP_BALBcJ_T0054992.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62795076 62809123 - MGP_BALBcJ_P0054992 Slc38a11 protein_coding protein_coding MGP_BALBcJ_T0054993.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62797925 62809046 - Slc38a11 protein_coding processed_transcript MGP_BALBcJ_T0054994.1 MGP_BALBcJ_G0025749.1 mouse_genomes_project 2 62799840 62809153 - Slc38a11 protein_coding processed_transcript MGP_BALBcJ_T0010321.1 MGP_BALBcJ_G0008446.1 mouse_genomes_project 2 7491208 7491305 + Mir669b miRNA miRNA MGP_BALBcJ_T0013556.1 MGP_BALBcJ_G0011653.1 mouse_genomes_project 2 63593988 63594210 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100923.1 MGP_BALBcJ_G0038959.1 mouse_genomes_project 2 8021324 8021453 - Gm23877 snoRNA snoRNA MGP_BALBcJ_T0055834.1 MGP_BALBcJ_G0026035.1 mouse_genomes_project 2 86568074 86569007 - MGP_BALBcJ_P0055834 Olfr1199 protein_coding protein_coding MGP_BALBcJ_T0004130.1 MGP_BALBcJ_G0003656.1 mouse_genomes_project 2 161243631 161246761 + Ptprtos antisense antisense MGP_BALBcJ_T0056837.1 MGP_BALBcJ_G0026308.1 mouse_genomes_project 2 117210451 117248186 - MGP_BALBcJ_P0056837 Dnajc17 protein_coding protein_coding MGP_BALBcJ_T0056839.1 MGP_BALBcJ_G0026308.1 mouse_genomes_project 2 117217384 117221617 - Dnajc17 protein_coding processed_transcript MGP_BALBcJ_T0056840.1 MGP_BALBcJ_G0026308.1 mouse_genomes_project 2 117221654 117248173 - Dnajc17 protein_coding retained_intron MGP_BALBcJ_T0017700.1 MGP_BALBcJ_G0015336.1 mouse_genomes_project 2 15819969 15839604 - Gm20539 processed_transcript processed_transcript MGP_BALBcJ_T0058739.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155386596 155520755 + MGP_BALBcJ_P0058739 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058740.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155386608 155536931 + MGP_BALBcJ_P0058740 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058741.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155386608 155536929 + MGP_BALBcJ_P0058741 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058742.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155473450 155535742 + MGP_BALBcJ_P0058742 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058743.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155473450 155535747 + MGP_BALBcJ_P0058743 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058744.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155493316 155535523 + Dlgap4 protein_coding retained_intron MGP_BALBcJ_T0058745.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155493327 155521981 + MGP_BALBcJ_P0058745 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058746.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155493330 155521818 + MGP_BALBcJ_P0058746 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058747.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155493332 155535412 + MGP_BALBcJ_P0058747 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058748.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155493340 155535471 + MGP_BALBcJ_P0058748 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058749.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155493762 155536931 + MGP_BALBcJ_P0058749 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058750.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155521614 155536938 + MGP_BALBcJ_P0058750 Dlgap4 protein_coding protein_coding MGP_BALBcJ_T0058751.1 MGP_BALBcJ_G0026741.1 mouse_genomes_project 2 155532499 155535347 + Dlgap4 protein_coding processed_transcript MGP_BALBcJ_T0055405.1 MGP_BALBcJ_G0025841.1 mouse_genomes_project 2 74257141 74278678 + MGP_BALBcJ_P0055405 Plekha3 protein_coding protein_coding MGP_BALBcJ_T0055406.1 MGP_BALBcJ_G0025841.1 mouse_genomes_project 2 74271703 74274614 + Plekha3 protein_coding processed_transcript MGP_BALBcJ_T0007179.1 MGP_BALBcJ_G0005884.1 mouse_genomes_project 2 48668959 48723004 + Gm13497 lincRNA lincRNA MGP_BALBcJ_T0100978.1 MGP_BALBcJ_G0039014.1 mouse_genomes_project 2 128467703 128467832 + Gm24665 snoRNA snoRNA MGP_BALBcJ_T0010340.1 MGP_BALBcJ_G0008465.1 mouse_genomes_project 2 7515229 7515331 + Gm22925 miRNA miRNA MGP_BALBcJ_T0054322.1 MGP_BALBcJ_G0025617.1 mouse_genomes_project 2 32153051 32174388 - MGP_BALBcJ_P0054322 Psmd5 protein_coding protein_coding MGP_BALBcJ_T0054323.1 MGP_BALBcJ_G0025617.1 mouse_genomes_project 2 32155419 32174359 - Psmd5 protein_coding retained_intron MGP_BALBcJ_T0054324.1 MGP_BALBcJ_G0025617.1 mouse_genomes_project 2 32155760 32161009 - MGP_BALBcJ_P0054324 Psmd5 protein_coding protein_coding MGP_BALBcJ_T0054325.1 MGP_BALBcJ_G0025617.1 mouse_genomes_project 2 32170364 32178394 - Psmd5 protein_coding processed_transcript MGP_BALBcJ_T0054326.1 MGP_BALBcJ_G0025617.1 mouse_genomes_project 2 32174533 32175636 - Psmd5 protein_coding processed_transcript MGP_BALBcJ_T0054170.1 MGP_BALBcJ_G0025595.1 mouse_genomes_project 2 30032243 30050911 - MGP_BALBcJ_P0054170 Ttc16 protein_coding protein_coding MGP_BALBcJ_T0054179.1 MGP_BALBcJ_G0025595.1 mouse_genomes_project 2 30037662 30051112 - MGP_BALBcJ_P0054179 Ttc16 protein_coding protein_coding MGP_BALBcJ_T0054180.1 MGP_BALBcJ_G0025595.1 mouse_genomes_project 2 30037825 30050965 - MGP_BALBcJ_P0054180 Ttc16 protein_coding protein_coding MGP_BALBcJ_T0054181.1 MGP_BALBcJ_G0025595.1 mouse_genomes_project 2 30039613 30051161 - MGP_BALBcJ_P0054181 Ttc16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054182.1 MGP_BALBcJ_G0025595.1 mouse_genomes_project 2 30048287 30051115 - Ttc16 protein_coding retained_intron MGP_BALBcJ_T0054183.1 MGP_BALBcJ_G0025595.1 mouse_genomes_project 2 30050034 30051159 - MGP_BALBcJ_P0054183 Ttc16 protein_coding protein_coding MGP_BALBcJ_T0054171.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032451 30037729 + MGP_BALBcJ_P0054171 Tor2a protein_coding protein_coding MGP_BALBcJ_T0054172.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032462 30037424 + MGP_BALBcJ_P0054172 Tor2a protein_coding protein_coding MGP_BALBcJ_T0054173.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032472 30037215 + MGP_BALBcJ_P0054173 Tor2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054174.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032477 30037729 + MGP_BALBcJ_P0054174 Tor2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054175.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032493 30037727 + Tor2a protein_coding retained_intron MGP_BALBcJ_T0054176.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032508 30033201 + Tor2a protein_coding processed_transcript MGP_BALBcJ_T0054177.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30032536 30037079 + MGP_BALBcJ_P0054177 Tor2a protein_coding protein_coding MGP_BALBcJ_T0054178.1 MGP_BALBcJ_G0025596.1 mouse_genomes_project 2 30035491 30037274 + Tor2a protein_coding retained_intron MGP_BALBcJ_T0055615.1 MGP_BALBcJ_G0025877.1 mouse_genomes_project 2 82204975 82234180 - MGP_BALBcJ_P0055615 Zdhhc5 protein_coding protein_coding MGP_BALBcJ_T0055616.1 MGP_BALBcJ_G0025877.1 mouse_genomes_project 2 82230134 82233686 - Zdhhc5 protein_coding processed_transcript MGP_BALBcJ_T0055617.1 MGP_BALBcJ_G0025877.1 mouse_genomes_project 2 82230283 82234036 - Zdhhc5 protein_coding processed_transcript MGP_BALBcJ_T0059262.1 MGP_BALBcJ_G0026871.1 mouse_genomes_project 2 164417536 164432502 + MGP_BALBcJ_P0059262 Slc2a10 protein_coding protein_coding MGP_BALBcJ_T0059263.1 MGP_BALBcJ_G0026871.1 mouse_genomes_project 2 164421823 164427367 + Slc2a10 protein_coding processed_transcript MGP_BALBcJ_T0013725.1 MGP_BALBcJ_G0011822.1 mouse_genomes_project 2 125944226 125946069 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059908.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181024536 181030024 - MGP_BALBcJ_P0059908 Rgs19 protein_coding protein_coding MGP_BALBcJ_T0059909.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181024542 181025624 - MGP_BALBcJ_P0059909 Rgs19 protein_coding protein_coding MGP_BALBcJ_T0059910.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181024545 181030044 - MGP_BALBcJ_P0059910 Rgs19 protein_coding protein_coding MGP_BALBcJ_T0059911.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181024627 181027941 - MGP_BALBcJ_P0059911 Rgs19 protein_coding protein_coding MGP_BALBcJ_T0059912.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181024630 181030054 - MGP_BALBcJ_P0059912 Rgs19 protein_coding protein_coding MGP_BALBcJ_T0059913.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181025458 181029755 - Rgs19 protein_coding processed_transcript MGP_BALBcJ_T0059914.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181025543 181030073 - Rgs19 protein_coding processed_transcript MGP_BALBcJ_T0059915.1 MGP_BALBcJ_G0027008.1 mouse_genomes_project 2 181025785 181030031 - Rgs19 protein_coding processed_transcript MGP_BALBcJ_T0058638.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831069 154835400 + Spag4 protein_coding retained_intron MGP_BALBcJ_T0058639.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831092 154836524 + Spag4 protein_coding retained_intron MGP_BALBcJ_T0058640.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831121 154835123 + Spag4 protein_coding retained_intron MGP_BALBcJ_T0058641.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831138 154835400 + MGP_BALBcJ_P0058641 Spag4 protein_coding protein_coding MGP_BALBcJ_T0058642.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831331 154833224 + MGP_BALBcJ_P0058642 Spag4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058643.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831447 154833431 + MGP_BALBcJ_P0058643 Spag4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058644.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154831636 154833939 + MGP_BALBcJ_P0058644 Spag4 protein_coding protein_coding MGP_BALBcJ_T0058645.1 MGP_BALBcJ_G0026729.1 mouse_genomes_project 2 154832629 154835277 + Spag4 protein_coding processed_transcript MGP_BALBcJ_T0101676.1 MGP_BALBcJ_G0039667.1 mouse_genomes_project 2 158816395 158816843 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0058552.1 MGP_BALBcJ_G0026713.1 mouse_genomes_project 2 154370256 154393417 + MGP_BALBcJ_P0058552 Myh7b protein_coding protein_coding MGP_BALBcJ_T0058553.1 MGP_BALBcJ_G0026713.1 mouse_genomes_project 2 154388148 154389491 + Myh7b protein_coding processed_transcript MGP_BALBcJ_T0058554.1 MGP_BALBcJ_G0026713.1 mouse_genomes_project 2 154392560 154393313 + Myh7b protein_coding retained_intron MGP_BALBcJ_T0099691.1 MGP_BALBcJ_G0037727.1 mouse_genomes_project 2 114973606 114973741 - Gm25514 snRNA snRNA MGP_BALBcJ_T0057592.1 MGP_BALBcJ_G0026469.1 mouse_genomes_project 2 128395683 128433973 + MGP_BALBcJ_P0057592 Tgm3 protein_coding protein_coding MGP_BALBcJ_T0056548.1 MGP_BALBcJ_G0026207.1 mouse_genomes_project 2 105242882 105250744 + MGP_BALBcJ_P0056548 Kcna4 protein_coding protein_coding MGP_BALBcJ_T0056549.1 MGP_BALBcJ_G0026207.1 mouse_genomes_project 2 105243638 105246714 + Kcna4 protein_coding processed_transcript MGP_BALBcJ_T0013588.1 MGP_BALBcJ_G0011685.1 mouse_genomes_project 2 74931700 74932306 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059066.1 MGP_BALBcJ_G0026816.1 mouse_genomes_project 2 163080390 163088190 - MGP_BALBcJ_P0059066 Wfdc15b protein_coding protein_coding MGP_BALBcJ_T0059067.1 MGP_BALBcJ_G0026816.1 mouse_genomes_project 2 163080390 163088161 - MGP_BALBcJ_P0059067 Wfdc15b protein_coding protein_coding MGP_BALBcJ_T0059068.1 MGP_BALBcJ_G0026816.1 mouse_genomes_project 2 163080391 163081520 - MGP_BALBcJ_P0059068 Wfdc15b protein_coding protein_coding MGP_BALBcJ_T0052611.1 MGP_BALBcJ_G0025332.1 mouse_genomes_project 2 10921534 11126469 - MGP_BALBcJ_P0052611 Hacd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052612.1 MGP_BALBcJ_G0025332.1 mouse_genomes_project 2 11099468 11126300 - MGP_BALBcJ_P0052612 Hacd1 protein_coding protein_coding MGP_BALBcJ_T0013604.1 MGP_BALBcJ_G0011701.1 mouse_genomes_project 2 80110019 80110548 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099682.1 MGP_BALBcJ_G0037718.1 mouse_genomes_project 2 76928477 76928580 + Gm22606 snRNA snRNA MGP_BALBcJ_T0013394.1 MGP_BALBcJ_G0011491.1 mouse_genomes_project 2 3111058 3112978 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055752.1 MGP_BALBcJ_G0025965.1 mouse_genomes_project 2 84689708 84690647 - MGP_BALBcJ_P0055752 Olfr1106 protein_coding protein_coding MGP_BALBcJ_T0055799.1 MGP_BALBcJ_G0026002.1 mouse_genomes_project 2 85559240 85560426 + MGP_BALBcJ_P0055799 Olfr1148 protein_coding protein_coding MGP_BALBcJ_T0053860.1 MGP_BALBcJ_G0025550.1 mouse_genomes_project 2 28127608 28141440 - MGP_BALBcJ_P0053860 Ptges protein_coding protein_coding MGP_BALBcJ_T0053861.1 MGP_BALBcJ_G0025550.1 mouse_genomes_project 2 28130419 28139926 - Ptges protein_coding processed_transcript MGP_BALBcJ_T0053862.1 MGP_BALBcJ_G0025550.1 mouse_genomes_project 2 28130433 28167963 - Ptges protein_coding processed_transcript MGP_BALBcJ_T0053863.1 MGP_BALBcJ_G0025550.1 mouse_genomes_project 2 28130625 28135607 - Ptges protein_coding processed_transcript MGP_BALBcJ_T0001046.1 MGP_BALBcJ_G0000974.1 mouse_genomes_project 2 12056144 12057470 + TEC TEC MGP_BALBcJ_T0102444.1 MGP_BALBcJ_G0040260.1 mouse_genomes_project 2 151838227 151838895 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0057501.1 MGP_BALBcJ_G0026444.1 mouse_genomes_project 2 126046678 126047781 - MGP_BALBcJ_P0057501 1500011K16Rik protein_coding protein_coding MGP_BALBcJ_T0056877.1 MGP_BALBcJ_G0026321.1 mouse_genomes_project 2 117665099 117698557 + MGP_BALBcJ_P0056877 Nusap1 protein_coding protein_coding MGP_BALBcJ_T0056878.1 MGP_BALBcJ_G0026321.1 mouse_genomes_project 2 117665495 117684113 + Nusap1 protein_coding processed_transcript MGP_BALBcJ_T0056879.1 MGP_BALBcJ_G0026321.1 mouse_genomes_project 2 117665518 117700047 + MGP_BALBcJ_P0056879 Nusap1 protein_coding protein_coding MGP_BALBcJ_T0056880.1 MGP_BALBcJ_G0026321.1 mouse_genomes_project 2 117665530 117678332 + Nusap1 protein_coding processed_transcript MGP_BALBcJ_T0099679.1 MGP_BALBcJ_G0037715.1 mouse_genomes_project 2 68997025 68997129 + Gm23253 snRNA snRNA MGP_BALBcJ_T0053659.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27140881 27165945 + MGP_BALBcJ_P0053659 Gle1 protein_coding protein_coding MGP_BALBcJ_T0053660.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27140883 27144363 + Gle1 protein_coding retained_intron MGP_BALBcJ_T0053661.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27140978 27144903 + Gle1 protein_coding retained_intron MGP_BALBcJ_T0053662.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27148013 27149439 + Gle1 protein_coding retained_intron MGP_BALBcJ_T0053663.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27148376 27150416 + Gle1 protein_coding retained_intron MGP_BALBcJ_T0053664.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27154682 27156315 + Gle1 protein_coding retained_intron MGP_BALBcJ_T0053665.1 MGP_BALBcJ_G0025521.1 mouse_genomes_project 2 27161085 27163791 + Gle1 protein_coding retained_intron MGP_BALBcJ_T0017772.1 MGP_BALBcJ_G0015383.1 mouse_genomes_project 2 90227959 90251356 + D930015M05Rik processed_transcript processed_transcript MGP_BALBcJ_T0010373.1 MGP_BALBcJ_G0008498.1 mouse_genomes_project 2 25908264 25908338 + Mir3088 miRNA miRNA MGP_BALBcJ_T0011480.1 MGP_BALBcJ_G0009605.1 mouse_genomes_project 2 64065410 64065694 + Gm23046 misc_RNA misc_RNA MGP_BALBcJ_T0013744.1 MGP_BALBcJ_G0011841.1 mouse_genomes_project 2 131125538 131126143 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054569.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36386857 36517325 - MGP_BALBcJ_P0054569 Scai protein_coding protein_coding MGP_BALBcJ_T0054570.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36395408 36517296 - MGP_BALBcJ_P0054570 Scai protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054571.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36395650 36517283 - MGP_BALBcJ_P0054571 Scai protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054572.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36395715 36421159 - MGP_BALBcJ_P0054572 Scai protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054573.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36401776 36517321 - MGP_BALBcJ_P0054573 Scai protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054574.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36423159 36517325 - Scai protein_coding retained_intron MGP_BALBcJ_T0054575.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36425214 36517321 - Scai protein_coding retained_intron MGP_BALBcJ_T0054576.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36428441 36430496 - Scai protein_coding retained_intron MGP_BALBcJ_T0054577.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36428590 36442888 - Scai protein_coding retained_intron MGP_BALBcJ_T0054578.1 MGP_BALBcJ_G0025683.1 mouse_genomes_project 2 36458532 36517319 - MGP_BALBcJ_P0054578 Scai protein_coding protein_coding MGP_BALBcJ_T0017750.1 MGP_BALBcJ_G0015367.1 mouse_genomes_project 2 70958531 70991989 + D230022J07Rik processed_transcript processed_transcript MGP_BALBcJ_T0059603.1 MGP_BALBcJ_G0026951.1 mouse_genomes_project 2 177634934 177697983 - MGP_BALBcJ_P0059603 Sycp2 protein_coding protein_coding MGP_BALBcJ_T0059604.1 MGP_BALBcJ_G0026951.1 mouse_genomes_project 2 177635760 177664958 - Sycp2 protein_coding processed_transcript MGP_BALBcJ_T0059605.1 MGP_BALBcJ_G0026951.1 mouse_genomes_project 2 177659417 177665298 - Sycp2 protein_coding retained_intron MGP_BALBcJ_T0059606.1 MGP_BALBcJ_G0026951.1 mouse_genomes_project 2 177685061 177697720 - MGP_BALBcJ_P0059606 Sycp2 protein_coding protein_coding MGP_BALBcJ_T0017730.1 MGP_BALBcJ_G0015354.1 mouse_genomes_project 2 33516229 33518175 + Gm13429 processed_transcript processed_transcript MGP_BALBcJ_T0017731.1 MGP_BALBcJ_G0015354.1 mouse_genomes_project 2 33516737 33526819 + Gm13429 processed_transcript processed_transcript MGP_BALBcJ_T0017732.1 MGP_BALBcJ_G0015354.1 mouse_genomes_project 2 33524669 33526818 + Gm13429 processed_transcript processed_transcript MGP_BALBcJ_T0056425.1 MGP_BALBcJ_G0026179.1 mouse_genomes_project 2 101894380 101948875 - 4931422A03Rik protein_coding processed_transcript MGP_BALBcJ_T0056432.1 MGP_BALBcJ_G0026179.1 mouse_genomes_project 2 101919723 101949384 - MGP_BALBcJ_P0056432 4931422A03Rik protein_coding protein_coding MGP_BALBcJ_T0056433.1 MGP_BALBcJ_G0026179.1 mouse_genomes_project 2 101946975 101949437 - 4931422A03Rik protein_coding retained_intron MGP_BALBcJ_T0054929.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59456543 59734573 + MGP_BALBcJ_P0054929 Slc4a10 protein_coding protein_coding MGP_BALBcJ_T0054930.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59456666 59732666 + Slc4a10 protein_coding processed_transcript MGP_BALBcJ_T0054931.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59456666 59734573 + MGP_BALBcJ_P0054931 Slc4a10 protein_coding protein_coding MGP_BALBcJ_T0054932.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59456726 59734573 + MGP_BALBcJ_P0054932 Slc4a10 protein_coding protein_coding MGP_BALBcJ_T0054933.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59560436 59570824 + Slc4a10 protein_coding processed_transcript MGP_BALBcJ_T0054934.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59671629 59673365 + Slc4a10 protein_coding processed_transcript MGP_BALBcJ_T0054935.1 MGP_BALBcJ_G0025739.1 mouse_genomes_project 2 59725249 59733220 + Slc4a10 protein_coding processed_transcript MGP_BALBcJ_T0017747.1 MGP_BALBcJ_G0015365.1 mouse_genomes_project 2 69278923 69281597 + Gm13663 processed_transcript processed_transcript MGP_BALBcJ_T0017748.1 MGP_BALBcJ_G0015365.1 mouse_genomes_project 2 69279880 69281557 + Gm13663 processed_transcript processed_transcript MGP_BALBcJ_T0058759.1 MGP_BALBcJ_G0026744.1 mouse_genomes_project 2 155632902 155634233 - MGP_BALBcJ_P0058759 4930518I15Rik protein_coding protein_coding MGP_BALBcJ_T0059395.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166910205 166952532 + Ptpn1 protein_coding processed_transcript MGP_BALBcJ_T0059396.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166910475 166957180 + MGP_BALBcJ_P0059396 Ptpn1 protein_coding protein_coding MGP_BALBcJ_T0059397.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166910520 166945580 + Ptpn1 protein_coding processed_transcript MGP_BALBcJ_T0059398.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166910520 166957180 + Ptpn1 protein_coding processed_transcript MGP_BALBcJ_T0059399.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166910543 166941482 + Ptpn1 protein_coding processed_transcript MGP_BALBcJ_T0059400.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166910543 166945528 + Ptpn1 protein_coding processed_transcript MGP_BALBcJ_T0059401.1 MGP_BALBcJ_G0026895.1 mouse_genomes_project 2 166929007 166942862 + Ptpn1 protein_coding processed_transcript MGP_BALBcJ_T0055780.1 MGP_BALBcJ_G0025985.1 mouse_genomes_project 2 85251879 85370486 - MGP_BALBcJ_P0055780 protein_coding protein_coding MGP_BALBcJ_T0013849.1 MGP_BALBcJ_G0011946.1 mouse_genomes_project 2 166558011 166558487 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055700.1 MGP_BALBcJ_G0025915.1 mouse_genomes_project 2 83409424 83410372 + MGP_BALBcJ_P0055700 Olfr1022 protein_coding protein_coding MGP_BALBcJ_T0059597.1 MGP_BALBcJ_G0026950.1 mouse_genomes_project 2 177409372 177628134 + MGP_BALBcJ_P0059597 Phactr3 protein_coding protein_coding MGP_BALBcJ_T0059598.1 MGP_BALBcJ_G0026950.1 mouse_genomes_project 2 177409576 177626133 + MGP_BALBcJ_P0059598 Phactr3 protein_coding protein_coding MGP_BALBcJ_T0059599.1 MGP_BALBcJ_G0026950.1 mouse_genomes_project 2 177432720 177626138 + MGP_BALBcJ_P0059599 Phactr3 protein_coding protein_coding MGP_BALBcJ_T0059600.1 MGP_BALBcJ_G0026950.1 mouse_genomes_project 2 177465713 177626133 + MGP_BALBcJ_P0059600 Phactr3 protein_coding protein_coding MGP_BALBcJ_T0059601.1 MGP_BALBcJ_G0026950.1 mouse_genomes_project 2 177617197 177621408 + Phactr3 protein_coding retained_intron MGP_BALBcJ_T0059602.1 MGP_BALBcJ_G0026950.1 mouse_genomes_project 2 177617433 177622472 + Phactr3 protein_coding retained_intron MGP_BALBcJ_T0013686.1 MGP_BALBcJ_G0011783.1 mouse_genomes_project 2 107386885 107387371 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053505.1 MGP_BALBcJ_G0025496.1 mouse_genomes_project 2 25669485 25675857 + Gbgt1 protein_coding processed_transcript MGP_BALBcJ_T0053506.1 MGP_BALBcJ_G0025496.1 mouse_genomes_project 2 25669485 25678010 + MGP_BALBcJ_P0053506 Gbgt1 protein_coding protein_coding MGP_BALBcJ_T0053507.1 MGP_BALBcJ_G0025496.1 mouse_genomes_project 2 25670340 25678010 + MGP_BALBcJ_P0053507 Gbgt1 protein_coding protein_coding MGP_BALBcJ_T0059722.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180248601 180269311 - MGP_BALBcJ_P0059722 Nkain4 protein_coding protein_coding MGP_BALBcJ_T0059723.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180248601 180269311 - MGP_BALBcJ_P0059723 Nkain4 protein_coding protein_coding MGP_BALBcJ_T0059724.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180248601 180257023 - MGP_BALBcJ_P0059724 Nkain4 protein_coding protein_coding MGP_BALBcJ_T0059725.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180249819 180269232 - MGP_BALBcJ_P0059725 Nkain4 protein_coding protein_coding MGP_BALBcJ_T0059726.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180251015 180269306 - MGP_BALBcJ_P0059726 Nkain4 protein_coding protein_coding MGP_BALBcJ_T0059727.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180257109 180268931 - Nkain4 protein_coding processed_transcript MGP_BALBcJ_T0059728.1 MGP_BALBcJ_G0026981.1 mouse_genomes_project 2 180257686 180263531 - MGP_BALBcJ_P0059728 Nkain4 protein_coding protein_coding MGP_BALBcJ_T0102387.1 MGP_BALBcJ_G0040203.1 mouse_genomes_project 2 33608529 33609468 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0053508.1 MGP_BALBcJ_G0025497.1 mouse_genomes_project 2 25678689 25679096 + MGP_BALBcJ_P0053508 protein_coding protein_coding MGP_BALBcJ_T0099671.1 MGP_BALBcJ_G0037707.1 mouse_genomes_project 2 35756935 35757043 + Gm25081 snRNA snRNA MGP_BALBcJ_T0055699.1 MGP_BALBcJ_G0025914.1 mouse_genomes_project 2 83379064 83393080 + MGP_BALBcJ_P0055699 Olfr1020 protein_coding protein_coding MGP_BALBcJ_T0007363.1 MGP_BALBcJ_G0006035.1 mouse_genomes_project 2 164906994 164915983 - Platr29 lincRNA lincRNA MGP_BALBcJ_T0013740.1 MGP_BALBcJ_G0011837.1 mouse_genomes_project 2 129889368 129889881 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056036.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88974352 88985530 - Nr1h3 protein_coding retained_intron MGP_BALBcJ_T0056037.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88974352 88985621 - MGP_BALBcJ_P0056037 Nr1h3 protein_coding protein_coding MGP_BALBcJ_T0056038.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88974352 88985540 - MGP_BALBcJ_P0056038 Nr1h3 protein_coding protein_coding MGP_BALBcJ_T0056039.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88974383 88985656 - MGP_BALBcJ_P0056039 Nr1h3 protein_coding protein_coding MGP_BALBcJ_T0056040.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88974383 88985390 - MGP_BALBcJ_P0056040 Nr1h3 protein_coding protein_coding MGP_BALBcJ_T0056041.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88974497 88983263 - Nr1h3 protein_coding retained_intron MGP_BALBcJ_T0056042.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88980411 88981162 - Nr1h3 protein_coding retained_intron MGP_BALBcJ_T0056043.1 MGP_BALBcJ_G0026114.1 mouse_genomes_project 2 88982549 88993474 - Nr1h3 protein_coding processed_transcript MGP_BALBcJ_T0007392.1 MGP_BALBcJ_G0006059.1 mouse_genomes_project 2 168667684 168925109 - lincRNA lincRNA MGP_BALBcJ_T0007393.1 MGP_BALBcJ_G0006059.1 mouse_genomes_project 2 168667714 168925109 - lincRNA lincRNA MGP_BALBcJ_T0055832.1 MGP_BALBcJ_G0026033.1 mouse_genomes_project 2 86516018 86517715 - MGP_BALBcJ_P0055832 protein_coding protein_coding MGP_BALBcJ_T0057971.1 MGP_BALBcJ_G0026553.1 mouse_genomes_project 2 142333041 142370720 - MGP_BALBcJ_P0057971 Bfsp1 protein_coding protein_coding MGP_BALBcJ_T0057972.1 MGP_BALBcJ_G0026553.1 mouse_genomes_project 2 142333041 142370490 - MGP_BALBcJ_P0057972 Bfsp1 protein_coding protein_coding MGP_BALBcJ_T0059072.1 MGP_BALBcJ_G0026819.1 mouse_genomes_project 2 163153616 163157598 + MGP_BALBcJ_P0059072 protein_coding protein_coding MGP_BALBcJ_T0056136.1 MGP_BALBcJ_G0026129.1 mouse_genomes_project 2 89741054 89742934 - MGP_BALBcJ_P0056136 Mdk protein_coding protein_coding MGP_BALBcJ_T0056137.1 MGP_BALBcJ_G0026129.1 mouse_genomes_project 2 89741077 89743533 - MGP_BALBcJ_P0056137 Mdk protein_coding protein_coding MGP_BALBcJ_T0056138.1 MGP_BALBcJ_G0026129.1 mouse_genomes_project 2 89741077 89743023 - MGP_BALBcJ_P0056138 Mdk protein_coding protein_coding MGP_BALBcJ_T0056139.1 MGP_BALBcJ_G0026129.1 mouse_genomes_project 2 89741215 89742945 - MGP_BALBcJ_P0056139 Mdk protein_coding protein_coding MGP_BALBcJ_T0057141.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119356682 119402067 - MGP_BALBcJ_P0057141 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057142.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119356682 119402064 - MGP_BALBcJ_P0057142 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057143.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119356682 119397733 - MGP_BALBcJ_P0057143 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057144.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119357012 119397701 - MGP_BALBcJ_P0057144 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057145.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119357018 119402130 - MGP_BALBcJ_P0057145 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057146.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119369043 119383898 - MGP_BALBcJ_P0057146 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057147.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119369078 119381481 - MGP_BALBcJ_P0057147 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057148.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119369156 119383468 - MGP_BALBcJ_P0057148 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057149.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119375023 119383894 - MGP_BALBcJ_P0057149 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0057150.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119375804 119383758 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057151.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119379101 119401811 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057152.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119381221 119388718 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057153.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119387100 119402045 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057154.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119390270 119395507 - MGP_BALBcJ_P0057154 Ppip5k1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057155.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119393328 119402064 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057156.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119393743 119401809 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057157.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119394907 119401806 - Ppip5k1 protein_coding retained_intron MGP_BALBcJ_T0057158.1 MGP_BALBcJ_G0026361.1 mouse_genomes_project 2 119397192 119402018 - MGP_BALBcJ_P0057158 Ppip5k1 protein_coding protein_coding MGP_BALBcJ_T0013727.1 MGP_BALBcJ_G0011824.1 mouse_genomes_project 2 126852150 126852424 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057544.1 MGP_BALBcJ_G0026455.1 mouse_genomes_project 2 127233010 127234147 - MGP_BALBcJ_P0057544 Gm10762 protein_coding protein_coding MGP_BALBcJ_T0055041.1 MGP_BALBcJ_G0025760.1 mouse_genomes_project 2 64915704 64997263 + MGP_BALBcJ_P0055041 Xirp2 protein_coding protein_coding MGP_BALBcJ_T0055042.1 MGP_BALBcJ_G0025760.1 mouse_genomes_project 2 64915704 64997271 + MGP_BALBcJ_P0055042 Xirp2 protein_coding protein_coding MGP_BALBcJ_T0007159.1 MGP_BALBcJ_G0005868.1 mouse_genomes_project 2 31387174 31401222 - Gm38389 lincRNA lincRNA MGP_BALBcJ_T0013531.1 MGP_BALBcJ_G0011628.1 mouse_genomes_project 2 54649814 54650003 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054419.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33395075 33417273 - MGP_BALBcJ_P0054419 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054420.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33395075 33417273 - MGP_BALBcJ_P0054420 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054421.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33395075 33418621 - MGP_BALBcJ_P0054421 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054422.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33395075 33418484 - MGP_BALBcJ_P0054422 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054423.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33395076 33418621 - MGP_BALBcJ_P0054423 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054424.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33396807 33407397 - MGP_BALBcJ_P0054424 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054425.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33396810 33418104 - MGP_BALBcJ_P0054425 Lhx6 protein_coding protein_coding MGP_BALBcJ_T0054426.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33407348 33416805 - Lhx6 protein_coding retained_intron MGP_BALBcJ_T0054427.1 MGP_BALBcJ_G0025634.1 mouse_genomes_project 2 33414531 33418468 - Lhx6 protein_coding processed_transcript MGP_BALBcJ_T0056933.1 MGP_BALBcJ_G0026330.1 mouse_genomes_project 2 118085291 118090160 + MGP_BALBcJ_P0056933 Jmjd7 protein_coding protein_coding MGP_BALBcJ_T0056935.1 MGP_BALBcJ_G0026330.1 mouse_genomes_project 2 118085312 118088104 + MGP_BALBcJ_P0056935 Jmjd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056938.1 MGP_BALBcJ_G0026330.1 mouse_genomes_project 2 118085324 118089442 + Jmjd7 protein_coding processed_transcript MGP_BALBcJ_T0056939.1 MGP_BALBcJ_G0026330.1 mouse_genomes_project 2 118085365 118088959 + Jmjd7 protein_coding processed_transcript MGP_BALBcJ_T0056940.1 MGP_BALBcJ_G0026330.1 mouse_genomes_project 2 118085402 118087951 + MGP_BALBcJ_P0056940 Jmjd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102389.1 MGP_BALBcJ_G0040205.1 mouse_genomes_project 2 33637153 33637606 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0056888.1 MGP_BALBcJ_G0026324.1 mouse_genomes_project 2 117792631 117801550 + MGP_BALBcJ_P0056888 Itpka protein_coding protein_coding MGP_BALBcJ_T0056853.1 MGP_BALBcJ_G0026312.1 mouse_genomes_project 2 117278552 117290946 + MGP_BALBcJ_P0056853 Spint1 protein_coding protein_coding MGP_BALBcJ_T0056854.1 MGP_BALBcJ_G0026312.1 mouse_genomes_project 2 117278667 117290627 + MGP_BALBcJ_P0056854 Spint1 protein_coding protein_coding MGP_BALBcJ_T0056855.1 MGP_BALBcJ_G0026312.1 mouse_genomes_project 2 117278743 117290959 + MGP_BALBcJ_P0056855 Spint1 protein_coding protein_coding MGP_BALBcJ_T0056856.1 MGP_BALBcJ_G0026312.1 mouse_genomes_project 2 117287799 117290334 + Spint1 protein_coding retained_intron MGP_BALBcJ_T0056857.1 MGP_BALBcJ_G0026312.1 mouse_genomes_project 2 117289636 117290481 + Spint1 protein_coding retained_intron MGP_BALBcJ_T0059583.1 MGP_BALBcJ_G0026944.1 mouse_genomes_project 2 173584796 173593969 + MGP_BALBcJ_P0059583 Tubb1 protein_coding protein_coding MGP_BALBcJ_T0001052.1 MGP_BALBcJ_G0000980.1 mouse_genomes_project 2 21948324 21950182 - TEC TEC MGP_BALBcJ_T0001047.1 MGP_BALBcJ_G0000975.1 mouse_genomes_project 2 12115974 12118358 - TEC TEC MGP_BALBcJ_T0056502.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103624177 103653224 + MGP_BALBcJ_P0056502 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056503.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103624177 103653224 + MGP_BALBcJ_P0056503 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056504.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103624197 103652322 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056505.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103624212 103639805 + MGP_BALBcJ_P0056505 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056506.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103627123 103653102 + MGP_BALBcJ_P0056506 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056507.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103629138 103631053 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056508.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103630285 103631139 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056509.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103630367 103630999 + Pax6 protein_coding retained_intron MGP_BALBcJ_T0056510.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103630367 103653103 + MGP_BALBcJ_P0056510 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056511.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103630609 103653204 + MGP_BALBcJ_P0056511 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056512.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103630689 103653221 + MGP_BALBcJ_P0056512 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056513.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103630703 103652931 + MGP_BALBcJ_P0056513 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056514.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103631294 103652931 + MGP_BALBcJ_P0056514 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056515.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103631295 103653221 + MGP_BALBcJ_P0056515 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056516.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103634192 103641731 + MGP_BALBcJ_P0056516 Pax6 protein_coding protein_coding MGP_BALBcJ_T0056517.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103635668 103648091 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056518.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103637513 103640918 + Pax6 protein_coding retained_intron MGP_BALBcJ_T0056519.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103638264 103648102 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056520.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103638309 103648134 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056521.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103638336 103652213 + Pax6 protein_coding retained_intron MGP_BALBcJ_T0056522.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103638338 103647596 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056523.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103638348 103648112 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056524.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103638438 103647567 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056525.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103639688 103640879 + Pax6 protein_coding retained_intron MGP_BALBcJ_T0056526.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103641257 103653224 + Pax6 protein_coding processed_transcript MGP_BALBcJ_T0056527.1 MGP_BALBcJ_G0026200.1 mouse_genomes_project 2 103648351 103648994 + Pax6 protein_coding retained_intron MGP_BALBcJ_T0055194.1 MGP_BALBcJ_G0025791.1 mouse_genomes_project 2 68612240 68637805 + MGP_BALBcJ_P0055194 Cybrd1 protein_coding protein_coding MGP_BALBcJ_T0055749.1 MGP_BALBcJ_G0025962.1 mouse_genomes_project 2 84640748 84641723 + MGP_BALBcJ_P0055749 Olfr1102 protein_coding protein_coding MGP_BALBcJ_T0011487.1 MGP_BALBcJ_G0009612.1 mouse_genomes_project 2 103070426 103070548 - Gm27636 misc_RNA misc_RNA MGP_BALBcJ_T0001065.1 MGP_BALBcJ_G0000993.1 mouse_genomes_project 2 35381767 35384631 - TEC TEC MGP_BALBcJ_T0099687.1 MGP_BALBcJ_G0037723.1 mouse_genomes_project 2 88990798 88990904 + Gm23390 snRNA snRNA MGP_BALBcJ_T0059483.1 MGP_BALBcJ_G0026916.1 mouse_genomes_project 2 171329466 171332085 + MGP_BALBcJ_P0059483 Mc3r protein_coding protein_coding MGP_BALBcJ_T0058721.1 MGP_BALBcJ_G0026737.1 mouse_genomes_project 2 155077740 155078598 - MGP_BALBcJ_P0058721 Scand1 protein_coding protein_coding MGP_BALBcJ_T0055326.1 MGP_BALBcJ_G0025814.1 mouse_genomes_project 2 71484205 71487085 - MGP_BALBcJ_P0055326 Atp5g3 protein_coding protein_coding MGP_BALBcJ_T0055327.1 MGP_BALBcJ_G0025814.1 mouse_genomes_project 2 71484205 71487084 - MGP_BALBcJ_P0055327 Atp5g3 protein_coding protein_coding MGP_BALBcJ_T0055328.1 MGP_BALBcJ_G0025814.1 mouse_genomes_project 2 71484489 71487041 - Atp5g3 protein_coding processed_transcript MGP_BALBcJ_T0055329.1 MGP_BALBcJ_G0025814.1 mouse_genomes_project 2 71484941 71486218 - Atp5g3 protein_coding processed_transcript MGP_BALBcJ_T0055330.1 MGP_BALBcJ_G0025814.1 mouse_genomes_project 2 71485076 71487050 - Atp5g3 protein_coding processed_transcript MGP_BALBcJ_T0001070.1 MGP_BALBcJ_G0000998.1 mouse_genomes_project 2 36161798 36165169 + TEC TEC MGP_BALBcJ_T0059302.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165514123 165529020 - MGP_BALBcJ_P0059302 Prex1 protein_coding protein_coding MGP_BALBcJ_T0059303.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165514965 165661417 - MGP_BALBcJ_P0059303 Prex1 protein_coding protein_coding MGP_BALBcJ_T0059304.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165515474 165520135 - Prex1 protein_coding processed_transcript MGP_BALBcJ_T0059305.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165546669 165550079 - Prex1 protein_coding retained_intron MGP_BALBcJ_T0059306.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165580474 165651199 - Prex1 protein_coding processed_transcript MGP_BALBcJ_T0059307.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165591438 165661490 - Prex1 protein_coding retained_intron MGP_BALBcJ_T0059308.1 MGP_BALBcJ_G0026876.1 mouse_genomes_project 2 165591651 165661301 - Prex1 protein_coding retained_intron MGP_BALBcJ_T0013790.1 MGP_BALBcJ_G0011887.1 mouse_genomes_project 2 149009378 149009773 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098363.1 MGP_BALBcJ_G0036417.1 mouse_genomes_project 2 101012876 101013305 + pseudogene pseudogene MGP_BALBcJ_T0007143.1 MGP_BALBcJ_G0005856.1 mouse_genomes_project 2 25259347 25260830 - Gm13371 lincRNA lincRNA MGP_BALBcJ_T0053189.1 MGP_BALBcJ_G0025434.1 mouse_genomes_project 2 22735075 22738442 - MGP_BALBcJ_P0053189 Fcna protein_coding protein_coding MGP_BALBcJ_T0053190.1 MGP_BALBcJ_G0025434.1 mouse_genomes_project 2 22735374 22737700 - Fcna protein_coding processed_transcript MGP_BALBcJ_T0013732.1 MGP_BALBcJ_G0011829.1 mouse_genomes_project 2 128485415 128486735 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007130.1 MGP_BALBcJ_G0005847.1 mouse_genomes_project 2 19764770 19770573 + 1700092C17Rik lincRNA lincRNA MGP_BALBcJ_T0007131.1 MGP_BALBcJ_G0005847.1 mouse_genomes_project 2 19770271 19770541 + 1700092C17Rik lincRNA lincRNA MGP_BALBcJ_T0007371.1 MGP_BALBcJ_G0006042.1 mouse_genomes_project 2 166051530 166054563 - lincRNA lincRNA MGP_BALBcJ_T0007372.1 MGP_BALBcJ_G0006042.1 mouse_genomes_project 2 166052421 166053907 - lincRNA lincRNA MGP_BALBcJ_T0054678.1 MGP_BALBcJ_G0025694.1 mouse_genomes_project 2 47068359 47226990 + MGP_BALBcJ_P0054678 Kif5c protein_coding protein_coding MGP_BALBcJ_T0054679.1 MGP_BALBcJ_G0025694.1 mouse_genomes_project 2 47152083 47182465 + MGP_BALBcJ_P0054679 Kif5c protein_coding protein_coding MGP_BALBcJ_T0054680.1 MGP_BALBcJ_G0025694.1 mouse_genomes_project 2 47174782 47187798 + Kif5c protein_coding processed_transcript MGP_BALBcJ_T0054681.1 MGP_BALBcJ_G0025694.1 mouse_genomes_project 2 47184824 47187789 + Kif5c protein_coding processed_transcript MGP_BALBcJ_T0054682.1 MGP_BALBcJ_G0025694.1 mouse_genomes_project 2 47196738 47209601 + Kif5c protein_coding processed_transcript MGP_BALBcJ_T0054683.1 MGP_BALBcJ_G0025694.1 mouse_genomes_project 2 47204403 47211122 + Kif5c protein_coding processed_transcript MGP_BALBcJ_T0059469.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169397168 169479623 - MGP_BALBcJ_P0059469 Bcas1 protein_coding protein_coding MGP_BALBcJ_T0059470.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169397320 169472457 - MGP_BALBcJ_P0059470 Bcas1 protein_coding protein_coding MGP_BALBcJ_T0059471.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169397321 169479623 - MGP_BALBcJ_P0059471 Bcas1 protein_coding protein_coding MGP_BALBcJ_T0059472.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169398108 169399918 - Bcas1 protein_coding processed_transcript MGP_BALBcJ_T0059473.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169398122 169407289 - Bcas1 protein_coding processed_transcript MGP_BALBcJ_T0059474.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169398266 169399973 - Bcas1 protein_coding processed_transcript MGP_BALBcJ_T0059475.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169438063 169439096 - Bcas1 protein_coding processed_transcript MGP_BALBcJ_T0059476.1 MGP_BALBcJ_G0026910.1 mouse_genomes_project 2 169448849 169479623 - Bcas1 protein_coding processed_transcript MGP_BALBcJ_T0017759.1 MGP_BALBcJ_G0015376.1 mouse_genomes_project 2 85764905 85772040 - processed_transcript processed_transcript MGP_BALBcJ_T0052893.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21859702 21995059 - MGP_BALBcJ_P0052893 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052894.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21862534 21966162 - MGP_BALBcJ_P0052894 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052895.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21862882 21995017 - MGP_BALBcJ_P0052895 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052896.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21862882 21878298 - MGP_BALBcJ_P0052896 Ehmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052897.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21862882 21995017 - MGP_BALBcJ_P0052897 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052898.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21877106 21898363 - Ehmt1 protein_coding retained_intron MGP_BALBcJ_T0052899.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21878212 21912991 - MGP_BALBcJ_P0052899 Ehmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052900.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21878270 21879225 - Ehmt1 protein_coding processed_transcript MGP_BALBcJ_T0052901.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21896201 21995033 - MGP_BALBcJ_P0052901 Ehmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052902.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21897943 21926251 - MGP_BALBcJ_P0052902 Ehmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052903.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21908501 21995022 - Ehmt1 protein_coding retained_intron MGP_BALBcJ_T0052904.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21921426 21951369 - MGP_BALBcJ_P0052904 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052905.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21936912 21958748 - MGP_BALBcJ_P0052905 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052906.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21936981 21995050 - MGP_BALBcJ_P0052906 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0052907.1 MGP_BALBcJ_G0025385.1 mouse_genomes_project 2 21937578 21995041 - MGP_BALBcJ_P0052907 Ehmt1 protein_coding protein_coding MGP_BALBcJ_T0007107.1 MGP_BALBcJ_G0005829.1 mouse_genomes_project 2 3452354 3458974 + Gm13391 lincRNA lincRNA MGP_BALBcJ_T0007108.1 MGP_BALBcJ_G0005829.1 mouse_genomes_project 2 3452625 3453466 + Gm13391 lincRNA lincRNA MGP_BALBcJ_T0057459.1 MGP_BALBcJ_G0026432.1 mouse_genomes_project 2 125590542 125592760 + MGP_BALBcJ_P0057459 Dusp2 protein_coding protein_coding MGP_BALBcJ_T0057460.1 MGP_BALBcJ_G0026432.1 mouse_genomes_project 2 125590993 125591888 + Dusp2 protein_coding retained_intron MGP_BALBcJ_T0055809.1 MGP_BALBcJ_G0026012.1 mouse_genomes_project 2 85764329 85765271 - MGP_BALBcJ_P0055809 Olfr73 protein_coding protein_coding MGP_BALBcJ_T0013582.1 MGP_BALBcJ_G0011679.1 mouse_genomes_project 2 72199765 72200224 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055722.1 MGP_BALBcJ_G0025936.1 mouse_genomes_project 2 83891289 83892228 + MGP_BALBcJ_P0055722 Olfr1052 protein_coding protein_coding MGP_BALBcJ_T0057992.1 MGP_BALBcJ_G0026558.1 mouse_genomes_project 2 142792498 142801241 + MGP_BALBcJ_P0057992 Mgme1 protein_coding unknown_likely_coding MGP_BALBcJ_T0054084.1 MGP_BALBcJ_G0025580.1 mouse_genomes_project 2 29668617 29679144 + MGP_BALBcJ_P0054084 Ptges2 protein_coding protein_coding MGP_BALBcJ_T0054085.1 MGP_BALBcJ_G0025580.1 mouse_genomes_project 2 29669161 29674397 + MGP_BALBcJ_P0054085 Ptges2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054086.1 MGP_BALBcJ_G0025580.1 mouse_genomes_project 2 29670206 29674950 + Ptges2 protein_coding retained_intron MGP_BALBcJ_T0054473.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34653812 34702973 - MGP_BALBcJ_P0054473 Rc3h2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054474.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34655907 34702901 - MGP_BALBcJ_P0054474 Rc3h2 protein_coding protein_coding MGP_BALBcJ_T0054475.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34657531 34658243 - Rc3h2 protein_coding retained_intron MGP_BALBcJ_T0054476.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34658433 34661888 - Rc3h2 protein_coding retained_intron MGP_BALBcJ_T0054477.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34668627 34670863 - Rc3h2 protein_coding retained_intron MGP_BALBcJ_T0054478.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34676996 34680010 - Rc3h2 protein_coding retained_intron MGP_BALBcJ_T0054479.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34689663 34694831 - Rc3h2 protein_coding processed_transcript MGP_BALBcJ_T0054480.1 MGP_BALBcJ_G0025665.1 mouse_genomes_project 2 34693627 34697106 - Rc3h2 protein_coding retained_intron MGP_BALBcJ_T0102439.1 MGP_BALBcJ_G0040255.1 mouse_genomes_project 2 127644681 127645802 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013496.1 MGP_BALBcJ_G0011593.1 mouse_genomes_project 2 42125249 42127936 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053030.1 MGP_BALBcJ_G0025408.1 mouse_genomes_project 2 22362307 22376396 + MGP_BALBcJ_P0053030 Anapc2 protein_coding protein_coding MGP_BALBcJ_T0053031.1 MGP_BALBcJ_G0025408.1 mouse_genomes_project 2 22362424 22366862 + Anapc2 protein_coding processed_transcript MGP_BALBcJ_T0053032.1 MGP_BALBcJ_G0025408.1 mouse_genomes_project 2 22363307 22368896 + MGP_BALBcJ_P0053032 Anapc2 protein_coding protein_coding MGP_BALBcJ_T0053033.1 MGP_BALBcJ_G0025408.1 mouse_genomes_project 2 22369483 22370948 + Anapc2 protein_coding processed_transcript MGP_BALBcJ_T0058018.1 MGP_BALBcJ_G0026564.1 mouse_genomes_project 2 143066958 143075563 - MGP_BALBcJ_P0058018 Rbbp9 protein_coding protein_coding MGP_BALBcJ_T0058019.1 MGP_BALBcJ_G0026564.1 mouse_genomes_project 2 143068514 143075484 - Rbbp9 protein_coding processed_transcript MGP_BALBcJ_T0007319.1 MGP_BALBcJ_G0005998.1 mouse_genomes_project 2 136339529 136346315 - Gm14062 lincRNA lincRNA MGP_BALBcJ_T0054353.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32413761 32482524 + MGP_BALBcJ_P0054353 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054354.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32413761 32483236 + MGP_BALBcJ_P0054354 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054355.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32413761 32435151 + MGP_BALBcJ_P0054355 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054356.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32413888 32482836 + MGP_BALBcJ_P0054356 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054357.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32431791 32452059 + MGP_BALBcJ_P0054357 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054358.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32436657 32483236 + MGP_BALBcJ_P0054358 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054359.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32436657 32465024 + MGP_BALBcJ_P0054359 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054360.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32436681 32442105 + MGP_BALBcJ_P0054360 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054361.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32436681 32452059 + MGP_BALBcJ_P0054361 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054362.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32449483 32452059 + MGP_BALBcJ_P0054362 Cntrl protein_coding protein_coding MGP_BALBcJ_T0054363.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32464695 32470210 + MGP_BALBcJ_P0054363 Cntrl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054364.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32466196 32470638 + Cntrl protein_coding retained_intron MGP_BALBcJ_T0054365.1 MGP_BALBcJ_G0025623.1 mouse_genomes_project 2 32479661 32483225 + Cntrl protein_coding retained_intron MGP_BALBcJ_T0013663.1 MGP_BALBcJ_G0011760.1 mouse_genomes_project 2 100218011 100218305 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011467.1 MGP_BALBcJ_G0009592.1 mouse_genomes_project 2 17651702 17651791 + Gm27446 misc_RNA misc_RNA MGP_BALBcJ_T0055040.1 MGP_BALBcJ_G0025759.1 mouse_genomes_project 2 64902518 64902884 - MGP_BALBcJ_P0055040 Gm26727 protein_coding protein_coding MGP_BALBcJ_T0007405.1 MGP_BALBcJ_G0006070.1 mouse_genomes_project 2 173985824 173996860 - Gm14618 lincRNA lincRNA MGP_BALBcJ_T0100928.1 MGP_BALBcJ_G0038964.1 mouse_genomes_project 2 23770363 23770502 - Snhg7 snoRNA snoRNA MGP_BALBcJ_T0013775.1 MGP_BALBcJ_G0011872.1 mouse_genomes_project 2 144416944 144417559 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055765.1 MGP_BALBcJ_G0025978.1 mouse_genomes_project 2 85091258 85092239 + MGP_BALBcJ_P0055765 Olfr1122 protein_coding protein_coding MGP_BALBcJ_T0007367.1 MGP_BALBcJ_G0006039.1 mouse_genomes_project 2 165207959 165232995 + Gm11468 lincRNA lincRNA MGP_BALBcJ_T0017814.1 MGP_BALBcJ_G0015402.1 mouse_genomes_project 2 120816751 120818878 + processed_transcript processed_transcript MGP_BALBcJ_T0017815.1 MGP_BALBcJ_G0015402.1 mouse_genomes_project 2 120816772 120830075 + processed_transcript processed_transcript MGP_BALBcJ_T0011473.1 MGP_BALBcJ_G0009598.1 mouse_genomes_project 2 37906277 37906447 - Gm27348 misc_RNA misc_RNA MGP_BALBcJ_T0058147.1 MGP_BALBcJ_G0026604.1 mouse_genomes_project 2 149208144 149236505 - MGP_BALBcJ_P0058147 Apmap protein_coding protein_coding MGP_BALBcJ_T0058148.1 MGP_BALBcJ_G0026604.1 mouse_genomes_project 2 149212185 149228192 - Apmap protein_coding processed_transcript MGP_BALBcJ_T0058149.1 MGP_BALBcJ_G0026604.1 mouse_genomes_project 2 149222560 149236482 - Apmap protein_coding processed_transcript MGP_BALBcJ_T0013797.1 MGP_BALBcJ_G0011894.1 mouse_genomes_project 2 150782876 150784570 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057924.1 MGP_BALBcJ_G0026541.1 mouse_genomes_project 2 138164839 138245604 + MGP_BALBcJ_P0057924 Ism1 protein_coding protein_coding MGP_BALBcJ_T0057925.1 MGP_BALBcJ_G0026541.1 mouse_genomes_project 2 138164839 138245605 + MGP_BALBcJ_P0057925 Ism1 protein_coding protein_coding MGP_BALBcJ_T0059480.1 MGP_BALBcJ_G0026913.1 mouse_genomes_project 2 169634944 169657154 - MGP_BALBcJ_P0059480 4930470P17Rik protein_coding protein_coding MGP_BALBcJ_T0058125.1 MGP_BALBcJ_G0026595.1 mouse_genomes_project 2 147398495 147402740 - MGP_BALBcJ_P0058125 9230104L09Rik protein_coding protein_coding MGP_BALBcJ_T0058126.1 MGP_BALBcJ_G0026595.1 mouse_genomes_project 2 147398688 147417365 - 9230104L09Rik protein_coding processed_transcript MGP_BALBcJ_T0055591.1 MGP_BALBcJ_G0025872.1 mouse_genomes_project 2 82115007 82194795 - MGP_BALBcJ_P0055591 protein_coding protein_coding MGP_BALBcJ_T0098567.1 MGP_BALBcJ_G0036621.1 mouse_genomes_project 2 26657069 26657204 + Gm24976 rRNA rRNA MGP_BALBcJ_T0059223.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164190375 164191661 - Slc35c2 protein_coding retained_intron MGP_BALBcJ_T0059224.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164190375 164202164 - MGP_BALBcJ_P0059224 Slc35c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059225.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164190375 164202095 - MGP_BALBcJ_P0059225 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059226.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164190375 164202167 - MGP_BALBcJ_P0059226 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059227.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164190375 164202095 - MGP_BALBcJ_P0059227 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059228.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164190375 164202209 - MGP_BALBcJ_P0059228 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059229.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164191273 164196563 - Slc35c2 protein_coding retained_intron MGP_BALBcJ_T0059230.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164192173 164197708 - MGP_BALBcJ_P0059230 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059231.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164192209 164197940 - MGP_BALBcJ_P0059231 Slc35c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059232.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164194440 164197940 - MGP_BALBcJ_P0059232 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059233.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164194609 164202175 - MGP_BALBcJ_P0059233 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059234.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164194609 164202176 - MGP_BALBcJ_P0059234 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059235.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164194697 164200892 - MGP_BALBcJ_P0059235 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059236.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164194702 164202167 - MGP_BALBcJ_P0059236 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059237.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164195372 164202178 - Slc35c2 protein_coding retained_intron MGP_BALBcJ_T0059238.1 MGP_BALBcJ_G0026865.1 mouse_genomes_project 2 164197218 164202112 - MGP_BALBcJ_P0059238 Slc35c2 protein_coding protein_coding MGP_BALBcJ_T0059098.1 MGP_BALBcJ_G0026829.1 mouse_genomes_project 2 163360272 163363674 - MGP_BALBcJ_P0059098 Trp53tg5 protein_coding protein_coding MGP_BALBcJ_T0013417.1 MGP_BALBcJ_G0011514.1 mouse_genomes_project 2 14045524 14046535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055541.1 MGP_BALBcJ_G0025863.1 mouse_genomes_project 2 80553658 80621145 + MGP_BALBcJ_P0055541 Fsip2 protein_coding protein_coding MGP_BALBcJ_T0055542.1 MGP_BALBcJ_G0025863.1 mouse_genomes_project 2 80559523 80576787 + MGP_BALBcJ_P0055542 Fsip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055543.1 MGP_BALBcJ_G0025863.1 mouse_genomes_project 2 80592972 80621145 + MGP_BALBcJ_P0055543 Fsip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054408.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33063186 33293614 - MGP_BALBcJ_P0054408 Ttll11 protein_coding protein_coding MGP_BALBcJ_T0054409.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33063186 33293614 - MGP_BALBcJ_P0054409 Ttll11 protein_coding protein_coding MGP_BALBcJ_T0054410.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33063607 33293756 - MGP_BALBcJ_P0054410 Ttll11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054411.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33063892 33252715 - MGP_BALBcJ_P0054411 Ttll11 protein_coding protein_coding MGP_BALBcJ_T0054412.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33096294 33193514 - Ttll11 protein_coding processed_transcript MGP_BALBcJ_T0054413.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33200797 33256842 - Ttll11 protein_coding processed_transcript MGP_BALBcJ_T0054414.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33213860 33293903 - Ttll11 protein_coding processed_transcript MGP_BALBcJ_T0054415.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33214155 33262486 - MGP_BALBcJ_P0054415 Ttll11 protein_coding protein_coding MGP_BALBcJ_T0054416.1 MGP_BALBcJ_G0025631.1 mouse_genomes_project 2 33214175 33265693 - MGP_BALBcJ_P0054416 Ttll11 protein_coding protein_coding MGP_BALBcJ_T0004083.1 MGP_BALBcJ_G0003615.1 mouse_genomes_project 2 131154651 131158724 - Gm14097 antisense antisense MGP_BALBcJ_T0003957.1 MGP_BALBcJ_G0003531.1 mouse_genomes_project 2 49817328 49819673 + antisense antisense MGP_BALBcJ_T0013729.1 MGP_BALBcJ_G0011826.1 mouse_genomes_project 2 127221962 127222441 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003896.1 MGP_BALBcJ_G0003485.1 mouse_genomes_project 2 17800360 17804214 - Gm13362 antisense antisense MGP_BALBcJ_T0101008.1 MGP_BALBcJ_G0039044.1 mouse_genomes_project 2 164183192 164183323 - Gm25569 snoRNA snoRNA MGP_BALBcJ_T0007290.1 MGP_BALBcJ_G0005974.1 mouse_genomes_project 2 116145282 116145879 - Gm29233 lincRNA lincRNA MGP_BALBcJ_T0098357.1 MGP_BALBcJ_G0036411.1 mouse_genomes_project 2 11678489 11679111 - pseudogene pseudogene MGP_BALBcJ_T0057187.1 MGP_BALBcJ_G0026368.1 mouse_genomes_project 2 119497442 119501688 + MGP_BALBcJ_P0057187 Serf2 protein_coding protein_coding MGP_BALBcJ_T0057188.1 MGP_BALBcJ_G0026368.1 mouse_genomes_project 2 119497615 119501273 + Serf2 protein_coding retained_intron MGP_BALBcJ_T0057189.1 MGP_BALBcJ_G0026368.1 mouse_genomes_project 2 119497625 119499557 + MGP_BALBcJ_P0057189 Serf2 protein_coding protein_coding MGP_BALBcJ_T0057190.1 MGP_BALBcJ_G0026368.1 mouse_genomes_project 2 119497630 119499321 + MGP_BALBcJ_P0057190 Serf2 protein_coding protein_coding MGP_BALBcJ_T0057191.1 MGP_BALBcJ_G0026368.1 mouse_genomes_project 2 119497659 119506507 + MGP_BALBcJ_P0057191 Serf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057192.1 MGP_BALBcJ_G0026368.1 mouse_genomes_project 2 119497659 119506505 + MGP_BALBcJ_P0057192 Serf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055807.1 MGP_BALBcJ_G0026010.1 mouse_genomes_project 2 85694231 85695188 - MGP_BALBcJ_P0055807 Olfr74 protein_coding protein_coding MGP_BALBcJ_T0011476.1 MGP_BALBcJ_G0009601.1 mouse_genomes_project 2 42448713 42448813 + Gm27404 misc_RNA misc_RNA MGP_BALBcJ_T0010421.1 MGP_BALBcJ_G0008546.1 mouse_genomes_project 2 92078809 92078874 + Mir129b miRNA miRNA MGP_BALBcJ_T0059053.1 MGP_BALBcJ_G0026810.1 mouse_genomes_project 2 162918097 162930466 - Tomm34 protein_coding retained_intron MGP_BALBcJ_T0059054.1 MGP_BALBcJ_G0026810.1 mouse_genomes_project 2 162918097 162935916 - MGP_BALBcJ_P0059054 Tomm34 protein_coding protein_coding MGP_BALBcJ_T0059055.1 MGP_BALBcJ_G0026810.1 mouse_genomes_project 2 162918097 162935849 - MGP_BALBcJ_P0059055 Tomm34 protein_coding protein_coding MGP_BALBcJ_T0055347.1 MGP_BALBcJ_G0025818.1 mouse_genomes_project 2 72243188 72245885 + MGP_BALBcJ_P0055347 Hoxd12 protein_coding protein_coding MGP_BALBcJ_T0056807.1 MGP_BALBcJ_G0026300.1 mouse_genomes_project 2 116933450 116949462 + MGP_BALBcJ_P0056807 Bahd1 protein_coding protein_coding MGP_BALBcJ_T0056808.1 MGP_BALBcJ_G0026300.1 mouse_genomes_project 2 116934526 116958313 + MGP_BALBcJ_P0056808 Bahd1 protein_coding protein_coding MGP_BALBcJ_T0056809.1 MGP_BALBcJ_G0026300.1 mouse_genomes_project 2 116948884 116958304 + MGP_BALBcJ_P0056809 Bahd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0059390.1 MGP_BALBcJ_G0026893.1 mouse_genomes_project 2 166612344 166631300 - MGP_BALBcJ_P0059390 protein_coding protein_coding MGP_BALBcJ_T0059391.1 MGP_BALBcJ_G0026893.1 mouse_genomes_project 2 166612969 166660457 - protein_coding processed_transcript MGP_BALBcJ_T0059392.1 MGP_BALBcJ_G0026893.1 mouse_genomes_project 2 166613477 166614921 - protein_coding retained_intron MGP_BALBcJ_T0059393.1 MGP_BALBcJ_G0026893.1 mouse_genomes_project 2 166623928 166631298 - protein_coding retained_intron MGP_BALBcJ_T0058976.1 MGP_BALBcJ_G0026788.1 mouse_genomes_project 2 161784662 161788340 + Srsf6 protein_coding retained_intron MGP_BALBcJ_T0058977.1 MGP_BALBcJ_G0026788.1 mouse_genomes_project 2 161784662 161790256 + MGP_BALBcJ_P0058977 Srsf6 protein_coding protein_coding MGP_BALBcJ_T0058978.1 MGP_BALBcJ_G0026788.1 mouse_genomes_project 2 161784696 161788158 + MGP_BALBcJ_P0058978 Srsf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058979.1 MGP_BALBcJ_G0026788.1 mouse_genomes_project 2 161784795 161786640 + MGP_BALBcJ_P0058979 Srsf6 protein_coding protein_coding MGP_BALBcJ_T0007279.1 MGP_BALBcJ_G0005966.1 mouse_genomes_project 2 114074682 114075898 - 2700033N17Rik lincRNA lincRNA MGP_BALBcJ_T0056550.1 MGP_BALBcJ_G0026208.1 mouse_genomes_project 2 107015567 107194645 - MGP_BALBcJ_P0056550 Mettl15 protein_coding protein_coding MGP_BALBcJ_T0056551.1 MGP_BALBcJ_G0026208.1 mouse_genomes_project 2 107015570 107194635 - Mettl15 protein_coding processed_transcript MGP_BALBcJ_T0056552.1 MGP_BALBcJ_G0026208.1 mouse_genomes_project 2 107045272 107197103 - MGP_BALBcJ_P0056552 Mettl15 protein_coding protein_coding MGP_BALBcJ_T0056553.1 MGP_BALBcJ_G0026208.1 mouse_genomes_project 2 107154704 107197081 - Mettl15 protein_coding retained_intron MGP_BALBcJ_T0056554.1 MGP_BALBcJ_G0026208.1 mouse_genomes_project 2 107154769 107197057 - Mettl15 protein_coding processed_transcript MGP_BALBcJ_T0013708.1 MGP_BALBcJ_G0011805.1 mouse_genomes_project 2 116618593 116619078 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007122.1 MGP_BALBcJ_G0005841.1 mouse_genomes_project 2 9755108 9764549 + Gm37565 lincRNA lincRNA MGP_BALBcJ_T0058763.1 MGP_BALBcJ_G0026746.1 mouse_genomes_project 2 155648685 155663267 - MGP_BALBcJ_P0058763 Sla2 protein_coding protein_coding MGP_BALBcJ_T0058765.1 MGP_BALBcJ_G0026746.1 mouse_genomes_project 2 155649150 155663381 - MGP_BALBcJ_P0058765 Sla2 protein_coding protein_coding MGP_BALBcJ_T0011469.1 MGP_BALBcJ_G0009594.1 mouse_genomes_project 2 20852833 20853008 + Gm26323 misc_RNA misc_RNA MGP_BALBcJ_T0055786.1 MGP_BALBcJ_G0025991.1 mouse_genomes_project 2 85358567 85359742 - MGP_BALBcJ_P0055786 Olfr1133 protein_coding protein_coding MGP_BALBcJ_T0101004.1 MGP_BALBcJ_G0039040.1 mouse_genomes_project 2 157976181 157976313 + Gm25090 snoRNA snoRNA MGP_BALBcJ_T0058264.1 MGP_BALBcJ_G0026633.1 mouse_genomes_project 2 150988920 150993373 - MGP_BALBcJ_P0058264 Sox12 protein_coding protein_coding MGP_BALBcJ_T0058265.1 MGP_BALBcJ_G0026633.1 mouse_genomes_project 2 150988923 150993356 - MGP_BALBcJ_P0058265 Sox12 protein_coding protein_coding MGP_BALBcJ_T0004013.1 MGP_BALBcJ_G0003569.1 mouse_genomes_project 2 77985496 77991708 + Gm13752 antisense antisense MGP_BALBcJ_T0013555.1 MGP_BALBcJ_G0011652.1 mouse_genomes_project 2 62738045 62739237 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099711.1 MGP_BALBcJ_G0037747.1 mouse_genomes_project 2 162387161 162387264 + Gm25881 snRNA snRNA MGP_BALBcJ_T0000335.1 MGP_BALBcJ_G0000276.1 mouse_genomes_project 2 19588330 19588400 - mt-Td Mt_tRNA Mt_tRNA MGP_BALBcJ_T0054447.1 MGP_BALBcJ_G0025644.1 mouse_genomes_project 2 33929198 33930134 + MGP_BALBcJ_P0054447 Olfr345 protein_coding protein_coding MGP_BALBcJ_T0013752.1 MGP_BALBcJ_G0011849.1 mouse_genomes_project 2 135215980 135216450 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010424.1 MGP_BALBcJ_G0008549.1 mouse_genomes_project 2 101766689 101766785 + Gm22757 miRNA miRNA MGP_BALBcJ_T0004040.1 MGP_BALBcJ_G0003586.1 mouse_genomes_project 2 111486057 111489414 - Gm13964 antisense antisense MGP_BALBcJ_T0053456.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24408231 24576505 - MGP_BALBcJ_P0053456 Vav2 protein_coding unknown_likely_coding MGP_BALBcJ_T0053457.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24408235 24576938 - MGP_BALBcJ_P0053457 Vav2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053458.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24408235 24577059 - MGP_BALBcJ_P0053458 Vav2 protein_coding protein_coding MGP_BALBcJ_T0053459.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24414586 24423151 - Vav2 protein_coding processed_transcript MGP_BALBcJ_T0053460.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24415050 24424689 - Vav2 protein_coding processed_transcript MGP_BALBcJ_T0053461.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24415712 24417930 - Vav2 protein_coding processed_transcript MGP_BALBcJ_T0053462.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24415712 24418007 - Vav2 protein_coding processed_transcript MGP_BALBcJ_T0053463.1 MGP_BALBcJ_G0025486.1 mouse_genomes_project 2 24447814 24490787 - Vav2 protein_coding processed_transcript MGP_BALBcJ_T0007196.1 MGP_BALBcJ_G0005899.1 mouse_genomes_project 2 65144211 65154462 - Gm26743 lincRNA lincRNA MGP_BALBcJ_T0010317.1 MGP_BALBcJ_G0008442.1 mouse_genomes_project 2 7490081 7490165 + Mir466m miRNA miRNA MGP_BALBcJ_T0057245.1 MGP_BALBcJ_G0026381.1 mouse_genomes_project 2 120261613 120286830 + MGP_BALBcJ_P0057245 Trim69 protein_coding protein_coding MGP_BALBcJ_T0057246.1 MGP_BALBcJ_G0026381.1 mouse_genomes_project 2 120261715 120286827 + Trim69 protein_coding processed_transcript MGP_BALBcJ_T0059536.1 MGP_BALBcJ_G0026933.1 mouse_genomes_project 2 172648439 172654939 + MGP_BALBcJ_P0059536 1700021F07Rik protein_coding protein_coding MGP_BALBcJ_T0001086.1 MGP_BALBcJ_G0001014.1 mouse_genomes_project 2 101275953 101279357 - TEC TEC MGP_BALBcJ_T0057035.1 MGP_BALBcJ_G0026345.1 mouse_genomes_project 2 118663916 118676558 + MGP_BALBcJ_P0057035 Haus2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057036.1 MGP_BALBcJ_G0026345.1 mouse_genomes_project 2 118663986 118678224 + MGP_BALBcJ_P0057036 Haus2 protein_coding protein_coding MGP_BALBcJ_T0004146.1 MGP_BALBcJ_G0003665.1 mouse_genomes_project 2 163817179 163825961 + Zfp335os antisense antisense MGP_BALBcJ_T0004147.1 MGP_BALBcJ_G0003665.1 mouse_genomes_project 2 163819847 163825571 + Zfp335os antisense antisense MGP_BALBcJ_T0013723.1 MGP_BALBcJ_G0011820.1 mouse_genomes_project 2 125825067 125825917 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099698.1 MGP_BALBcJ_G0037734.1 mouse_genomes_project 2 126346670 126346807 + Gm23101 snRNA snRNA MGP_BALBcJ_T0102391.1 MGP_BALBcJ_G0040207.1 mouse_genomes_project 2 34138129 34138711 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099697.1 MGP_BALBcJ_G0037733.1 mouse_genomes_project 2 124865449 124865598 - Gm23753 snRNA snRNA MGP_BALBcJ_T0007210.1 MGP_BALBcJ_G0005910.1 mouse_genomes_project 2 71713299 71728530 + Gm13667 lincRNA lincRNA MGP_BALBcJ_T0004041.1 MGP_BALBcJ_G0003587.1 mouse_genomes_project 2 111673964 111692288 - 4930533B01Rik antisense antisense MGP_BALBcJ_T0004108.1 MGP_BALBcJ_G0003635.1 mouse_genomes_project 2 150458671 150460317 - Rspo4os antisense antisense MGP_BALBcJ_T0053634.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094267 27106166 + MGP_BALBcJ_P0053634 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053635.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094280 27097624 + Odf2 protein_coding retained_intron MGP_BALBcJ_T0053636.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094766 27127995 + MGP_BALBcJ_P0053636 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053637.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094831 27127995 + MGP_BALBcJ_P0053637 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053638.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094841 27136551 + MGP_BALBcJ_P0053638 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053639.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094841 27137201 + MGP_BALBcJ_P0053639 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053640.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094844 27136551 + MGP_BALBcJ_P0053640 Odf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053641.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094857 27107335 + Odf2 protein_coding processed_transcript MGP_BALBcJ_T0053642.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094861 27107305 + MGP_BALBcJ_P0053642 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053643.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094863 27137201 + MGP_BALBcJ_P0053643 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053644.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094864 27127995 + MGP_BALBcJ_P0053644 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053645.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094871 27106552 + Odf2 protein_coding retained_intron MGP_BALBcJ_T0053646.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094880 27109138 + MGP_BALBcJ_P0053646 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053647.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27094941 27137202 + MGP_BALBcJ_P0053647 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053648.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27095109 27127995 + MGP_BALBcJ_P0053648 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053649.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27095129 27096037 + Odf2 protein_coding processed_transcript MGP_BALBcJ_T0053650.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27095189 27127995 + MGP_BALBcJ_P0053650 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053651.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27095202 27136551 + MGP_BALBcJ_P0053651 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053652.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27095586 27127992 + MGP_BALBcJ_P0053652 Odf2 protein_coding protein_coding MGP_BALBcJ_T0053653.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27097042 27106180 + Odf2 protein_coding processed_transcript MGP_BALBcJ_T0053654.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27108602 27120106 + Odf2 protein_coding processed_transcript MGP_BALBcJ_T0053655.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27108633 27120547 + Odf2 protein_coding processed_transcript MGP_BALBcJ_T0053656.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27117856 27120510 + Odf2 protein_coding retained_intron MGP_BALBcJ_T0053657.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27119626 27124428 + Odf2 protein_coding retained_intron MGP_BALBcJ_T0053658.1 MGP_BALBcJ_G0025520.1 mouse_genomes_project 2 27130927 27132201 + Odf2 protein_coding retained_intron MGP_BALBcJ_T0100954.1 MGP_BALBcJ_G0038990.1 mouse_genomes_project 2 60227801 60227937 - Gm22020 snoRNA snoRNA MGP_BALBcJ_T0100937.1 MGP_BALBcJ_G0038973.1 mouse_genomes_project 2 29948067 29948204 + Gm26236 snoRNA snoRNA MGP_BALBcJ_T0004014.1 MGP_BALBcJ_G0003570.1 mouse_genomes_project 2 81252472 81252932 - Gm13686 antisense antisense MGP_BALBcJ_T0010433.1 MGP_BALBcJ_G0008558.1 mouse_genomes_project 2 118075270 118075333 + Mir7665 miRNA miRNA MGP_BALBcJ_T0054925.1 MGP_BALBcJ_G0025738.1 mouse_genomes_project 2 59225412 59227037 + Tbr1 protein_coding processed_transcript MGP_BALBcJ_T0054926.1 MGP_BALBcJ_G0025738.1 mouse_genomes_project 2 59226931 59236589 + MGP_BALBcJ_P0054926 Tbr1 protein_coding protein_coding MGP_BALBcJ_T0054927.1 MGP_BALBcJ_G0025738.1 mouse_genomes_project 2 59228740 59235006 + MGP_BALBcJ_P0054927 Tbr1 protein_coding protein_coding MGP_BALBcJ_T0054928.1 MGP_BALBcJ_G0025738.1 mouse_genomes_project 2 59228751 59234276 + Tbr1 protein_coding processed_transcript MGP_BALBcJ_T0013563.1 MGP_BALBcJ_G0011660.1 mouse_genomes_project 2 66275390 66275780 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013669.1 MGP_BALBcJ_G0011766.1 mouse_genomes_project 2 101771013 101771252 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099655.1 MGP_BALBcJ_G0037691.1 mouse_genomes_project 2 1322636 1322743 - Gm23691 snRNA snRNA MGP_BALBcJ_T0057997.1 MGP_BALBcJ_G0026561.1 mouse_genomes_project 2 142891845 142896576 + MGP_BALBcJ_P0057997 Pet117 protein_coding protein_coding MGP_BALBcJ_T0013646.1 MGP_BALBcJ_G0011743.1 mouse_genomes_project 2 91774949 91775529 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004053.1 MGP_BALBcJ_G0003595.1 mouse_genomes_project 2 118082675 118085262 - Gm13999 antisense antisense MGP_BALBcJ_T0056812.1 MGP_BALBcJ_G0026302.1 mouse_genomes_project 2 117054164 117066176 - MGP_BALBcJ_P0056812 Ccdc32 protein_coding protein_coding MGP_BALBcJ_T0056813.1 MGP_BALBcJ_G0026302.1 mouse_genomes_project 2 117058113 117066176 - MGP_BALBcJ_P0056813 Ccdc32 protein_coding protein_coding MGP_BALBcJ_T0056814.1 MGP_BALBcJ_G0026302.1 mouse_genomes_project 2 117058184 117066160 - MGP_BALBcJ_P0056814 Ccdc32 protein_coding protein_coding MGP_BALBcJ_T0055975.1 MGP_BALBcJ_G0026108.1 mouse_genomes_project 2 88807295 88817297 + MGP_BALBcJ_P0055975 Rapsn protein_coding protein_coding MGP_BALBcJ_T0055976.1 MGP_BALBcJ_G0026108.1 mouse_genomes_project 2 88807302 88817294 + MGP_BALBcJ_P0055976 Rapsn protein_coding protein_coding MGP_BALBcJ_T0055977.1 MGP_BALBcJ_G0026108.1 mouse_genomes_project 2 88807316 88817297 + MGP_BALBcJ_P0055977 Rapsn protein_coding protein_coding MGP_BALBcJ_T0055978.1 MGP_BALBcJ_G0026108.1 mouse_genomes_project 2 88814356 88817048 + Rapsn protein_coding retained_intron MGP_BALBcJ_T0055688.1 MGP_BALBcJ_G0025903.1 mouse_genomes_project 2 83189319 83203997 - MGP_BALBcJ_P0055688 protein_coding protein_coding MGP_BALBcJ_T0007139.1 MGP_BALBcJ_G0005853.1 mouse_genomes_project 2 23264302 23268064 - C330006A16Rik lincRNA lincRNA MGP_BALBcJ_T0007140.1 MGP_BALBcJ_G0005853.1 mouse_genomes_project 2 23265925 23266345 - C330006A16Rik lincRNA lincRNA MGP_BALBcJ_T0055171.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68207422 68320936 - Tlk1 protein_coding processed_transcript MGP_BALBcJ_T0055172.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68207422 68321267 - MGP_BALBcJ_P0055172 Tlk1 protein_coding protein_coding MGP_BALBcJ_T0055173.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68209156 68213240 - Tlk1 protein_coding processed_transcript MGP_BALBcJ_T0055174.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68211327 68212920 - Tlk1 protein_coding processed_transcript MGP_BALBcJ_T0055175.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68241493 68320862 - Tlk1 protein_coding processed_transcript MGP_BALBcJ_T0055176.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68244729 68320850 - Tlk1 protein_coding processed_transcript MGP_BALBcJ_T0055177.1 MGP_BALBcJ_G0025788.1 mouse_genomes_project 2 68246484 68320767 - Tlk1 protein_coding processed_transcript MGP_BALBcJ_T0059652.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469603 179474739 + MGP_BALBcJ_P0059652 Adrm1 protein_coding protein_coding MGP_BALBcJ_T0059653.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469668 179474740 + MGP_BALBcJ_P0059653 Adrm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0059654.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469713 179470557 + Adrm1 protein_coding retained_intron MGP_BALBcJ_T0059655.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469724 179474737 + Adrm1 protein_coding retained_intron MGP_BALBcJ_T0059656.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469724 179471399 + Adrm1 protein_coding retained_intron MGP_BALBcJ_T0059657.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469732 179474588 + Adrm1 protein_coding retained_intron MGP_BALBcJ_T0059658.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179469777 179474739 + Adrm1 protein_coding processed_transcript MGP_BALBcJ_T0059659.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179470271 179474737 + Adrm1 protein_coding retained_intron MGP_BALBcJ_T0059660.1 MGP_BALBcJ_G0026963.1 mouse_genomes_project 2 179473472 179474735 + Adrm1 protein_coding retained_intron MGP_BALBcJ_T0013826.1 MGP_BALBcJ_G0011923.1 mouse_genomes_project 2 157226795 157227106 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053080.1 MGP_BALBcJ_G0025416.1 mouse_genomes_project 2 22492537 22497985 + MGP_BALBcJ_P0053080 Entpd2 protein_coding protein_coding MGP_BALBcJ_T0053081.1 MGP_BALBcJ_G0025416.1 mouse_genomes_project 2 22492579 22497956 + Entpd2 protein_coding processed_transcript MGP_BALBcJ_T0053082.1 MGP_BALBcJ_G0025416.1 mouse_genomes_project 2 22495416 22496513 + Entpd2 protein_coding processed_transcript MGP_BALBcJ_T0010381.1 MGP_BALBcJ_G0008506.1 mouse_genomes_project 2 29311283 29311346 + Mir7674 miRNA miRNA MGP_BALBcJ_T0055087.1 MGP_BALBcJ_G0025771.1 mouse_genomes_project 2 66870274 67032962 - MGP_BALBcJ_P0055087 Lrp2 protein_coding protein_coding MGP_BALBcJ_T0055088.1 MGP_BALBcJ_G0025771.1 mouse_genomes_project 2 66953494 67032926 - MGP_BALBcJ_P0055088 Lrp2 protein_coding protein_coding MGP_BALBcJ_T0055089.1 MGP_BALBcJ_G0025771.1 mouse_genomes_project 2 66954913 66956436 - Lrp2 protein_coding processed_transcript MGP_BALBcJ_T0055090.1 MGP_BALBcJ_G0025771.1 mouse_genomes_project 2 66973584 67032926 - MGP_BALBcJ_P0055090 Lrp2 protein_coding protein_coding MGP_BALBcJ_T0004100.1 MGP_BALBcJ_G0003628.1 mouse_genomes_project 2 144067722 144072053 - Gm14092 antisense antisense MGP_BALBcJ_T0007184.1 MGP_BALBcJ_G0005888.1 mouse_genomes_project 2 50307623 50311407 - Gm26603 lincRNA lincRNA MGP_BALBcJ_T0055855.1 MGP_BALBcJ_G0026054.1 mouse_genomes_project 2 86909067 86910003 - MGP_BALBcJ_P0055855 Olfr1220 protein_coding protein_coding MGP_BALBcJ_T0052468.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7393245 7462420 + MGP_BALBcJ_P0052468 Sfmbt2 protein_coding protein_coding MGP_BALBcJ_T0052469.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7393246 7462420 + MGP_BALBcJ_P0052469 Sfmbt2 protein_coding protein_coding MGP_BALBcJ_T0052470.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7393253 7428018 + Sfmbt2 protein_coding processed_transcript MGP_BALBcJ_T0052471.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7395130 7462420 + MGP_BALBcJ_P0052471 Sfmbt2 protein_coding protein_coding MGP_BALBcJ_T0052472.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7395130 7599279 + MGP_BALBcJ_P0052472 Sfmbt2 protein_coding protein_coding MGP_BALBcJ_T0052473.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7395142 7416681 + Sfmbt2 protein_coding processed_transcript MGP_BALBcJ_T0052474.1 MGP_BALBcJ_G0025314.1 mouse_genomes_project 2 7395144 7599291 + MGP_BALBcJ_P0052474 Sfmbt2 protein_coding protein_coding MGP_BALBcJ_T0098360.1 MGP_BALBcJ_G0036414.1 mouse_genomes_project 2 88686533 88686806 + pseudogene pseudogene MGP_BALBcJ_T0058238.1 MGP_BALBcJ_G0026626.1 mouse_genomes_project 2 150703455 150707262 + Srxn1 protein_coding processed_transcript MGP_BALBcJ_T0058239.1 MGP_BALBcJ_G0026626.1 mouse_genomes_project 2 150703455 150707151 + Srxn1 protein_coding processed_transcript MGP_BALBcJ_T0058240.1 MGP_BALBcJ_G0026626.1 mouse_genomes_project 2 150703463 150709316 + MGP_BALBcJ_P0058240 Srxn1 protein_coding protein_coding MGP_BALBcJ_T0055835.1 MGP_BALBcJ_G0026036.1 mouse_genomes_project 2 86579553 86580580 - MGP_BALBcJ_P0055835 protein_coding protein_coding MGP_BALBcJ_T0013651.1 MGP_BALBcJ_G0011748.1 mouse_genomes_project 2 94853255 94853925 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059519.1 MGP_BALBcJ_G0026928.1 mouse_genomes_project 2 172128868 172140880 + MGP_BALBcJ_P0059519 Rbm38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059520.1 MGP_BALBcJ_G0026928.1 mouse_genomes_project 2 172128882 172141695 + Rbm38 protein_coding retained_intron MGP_BALBcJ_T0059521.1 MGP_BALBcJ_G0026928.1 mouse_genomes_project 2 172129009 172140776 + MGP_BALBcJ_P0059521 Rbm38 protein_coding protein_coding MGP_BALBcJ_T0059522.1 MGP_BALBcJ_G0026928.1 mouse_genomes_project 2 172129080 172140617 + MGP_BALBcJ_P0059522 Rbm38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059523.1 MGP_BALBcJ_G0026928.1 mouse_genomes_project 2 172129407 172140676 + MGP_BALBcJ_P0059523 Rbm38 protein_coding protein_coding MGP_BALBcJ_T0059524.1 MGP_BALBcJ_G0026928.1 mouse_genomes_project 2 172130018 172141667 + Rbm38 protein_coding retained_intron MGP_BALBcJ_T0059661.1 MGP_BALBcJ_G0026964.1 mouse_genomes_project 2 179474825 179478096 - Lama5 protein_coding processed_transcript MGP_BALBcJ_T0059662.1 MGP_BALBcJ_G0026964.1 mouse_genomes_project 2 179474825 179524867 - MGP_BALBcJ_P0059662 Lama5 protein_coding protein_coding MGP_BALBcJ_T0059663.1 MGP_BALBcJ_G0026964.1 mouse_genomes_project 2 179474906 179476040 - Lama5 protein_coding processed_transcript MGP_BALBcJ_T0059664.1 MGP_BALBcJ_G0026964.1 mouse_genomes_project 2 179475620 179476856 - Lama5 protein_coding processed_transcript MGP_BALBcJ_T0013780.1 MGP_BALBcJ_G0011877.1 mouse_genomes_project 2 145825323 145825913 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058034.1 MGP_BALBcJ_G0026568.1 mouse_genomes_project 2 143348475 143349235 + MGP_BALBcJ_P0058034 Scp2d1 protein_coding protein_coding MGP_BALBcJ_T0056347.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100562122 100694513 + MGP_BALBcJ_P0056347 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0056348.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100562686 100639407 + Slc1a2 protein_coding processed_transcript MGP_BALBcJ_T0056349.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100562721 100639404 + Slc1a2 protein_coding processed_transcript MGP_BALBcJ_T0056350.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100562744 100681521 + MGP_BALBcJ_P0056350 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0056351.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100579241 100639404 + Slc1a2 protein_coding processed_transcript MGP_BALBcJ_T0056352.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100609835 100643321 + MGP_BALBcJ_P0056352 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0056353.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100609917 100685163 + MGP_BALBcJ_P0056353 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0056354.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100609917 100681530 + MGP_BALBcJ_P0056354 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0056355.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100622439 100639400 + Slc1a2 protein_coding processed_transcript MGP_BALBcJ_T0056356.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100659337 100681008 + MGP_BALBcJ_P0056356 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0056357.1 MGP_BALBcJ_G0026168.1 mouse_genomes_project 2 100664598 100684977 + MGP_BALBcJ_P0056357 Slc1a2 protein_coding protein_coding MGP_BALBcJ_T0004134.1 MGP_BALBcJ_G0003659.1 mouse_genomes_project 2 162366440 162408008 - Hnf4aos antisense antisense MGP_BALBcJ_T0004135.1 MGP_BALBcJ_G0003659.1 mouse_genomes_project 2 162366440 162408008 - Hnf4aos antisense antisense MGP_BALBcJ_T0004136.1 MGP_BALBcJ_G0003659.1 mouse_genomes_project 2 162366827 162407980 - Hnf4aos antisense antisense MGP_BALBcJ_T0052944.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139564 22148087 + MGP_BALBcJ_P0052944 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052945.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139582 22145768 + MGP_BALBcJ_P0052945 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052946.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139588 22148086 + MGP_BALBcJ_P0052946 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052947.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139593 22148087 + MGP_BALBcJ_P0052947 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052948.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139612 22142085 + Nsmf protein_coding retained_intron MGP_BALBcJ_T0052949.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139616 22140306 + Nsmf protein_coding retained_intron MGP_BALBcJ_T0052950.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139622 22148087 + MGP_BALBcJ_P0052950 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052951.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139622 22148087 + MGP_BALBcJ_P0052951 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052952.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139634 22144262 + MGP_BALBcJ_P0052952 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052953.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139644 22148087 + MGP_BALBcJ_P0052953 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052954.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139665 22148087 + MGP_BALBcJ_P0052954 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052955.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139677 22148087 + MGP_BALBcJ_P0052955 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052956.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22139677 22147834 + MGP_BALBcJ_P0052956 Nsmf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052957.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22141089 22142553 + Nsmf protein_coding retained_intron MGP_BALBcJ_T0052958.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22142352 22148087 + MGP_BALBcJ_P0052958 Nsmf protein_coding protein_coding MGP_BALBcJ_T0052959.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22142781 22144865 + Nsmf protein_coding retained_intron MGP_BALBcJ_T0052960.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22145341 22146313 + Nsmf protein_coding retained_intron MGP_BALBcJ_T0052961.1 MGP_BALBcJ_G0025391.1 mouse_genomes_project 2 22146034 22146915 + Nsmf protein_coding retained_intron MGP_BALBcJ_T0013701.1 MGP_BALBcJ_G0011798.1 mouse_genomes_project 2 110416759 110420024 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013717.1 MGP_BALBcJ_G0011814.1 mouse_genomes_project 2 119545253 119545639 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058980.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161797491 161826488 + L3mbtl1 protein_coding retained_intron MGP_BALBcJ_T0058981.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161797493 161828997 + MGP_BALBcJ_P0058981 L3mbtl1 protein_coding protein_coding MGP_BALBcJ_T0058982.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161797494 161803050 + L3mbtl1 protein_coding processed_transcript MGP_BALBcJ_T0058983.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161797494 161803122 + MGP_BALBcJ_P0058983 L3mbtl1 protein_coding protein_coding MGP_BALBcJ_T0058984.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161797519 161801408 + L3mbtl1 protein_coding processed_transcript MGP_BALBcJ_T0058985.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161802167 161803732 + L3mbtl1 protein_coding processed_transcript MGP_BALBcJ_T0058986.1 MGP_BALBcJ_G0026789.1 mouse_genomes_project 2 161802167 161803732 + MGP_BALBcJ_P0058986 L3mbtl1 protein_coding protein_coding MGP_BALBcJ_T0059530.1 MGP_BALBcJ_G0026931.1 mouse_genomes_project 2 172321119 172333450 - MGP_BALBcJ_P0059530 Zbp1 protein_coding protein_coding MGP_BALBcJ_T0059531.1 MGP_BALBcJ_G0026931.1 mouse_genomes_project 2 172321122 172333424 - Zbp1 protein_coding retained_intron MGP_BALBcJ_T0059532.1 MGP_BALBcJ_G0026931.1 mouse_genomes_project 2 172328242 172333437 - MGP_BALBcJ_P0059532 Zbp1 protein_coding protein_coding MGP_BALBcJ_T0058378.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274357 152318137 + MGP_BALBcJ_P0058378 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058379.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274357 152318137 + MGP_BALBcJ_P0058379 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058380.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274360 152318137 + MGP_BALBcJ_P0058380 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058381.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274360 152318137 + MGP_BALBcJ_P0058381 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058382.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274360 152318137 + MGP_BALBcJ_P0058382 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058383.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274361 152318137 + MGP_BALBcJ_P0058383 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058384.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274361 152318137 + MGP_BALBcJ_P0058384 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058385.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274361 152318137 + MGP_BALBcJ_P0058385 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058386.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274361 152318133 + MGP_BALBcJ_P0058386 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058387.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152274524 152317723 + MGP_BALBcJ_P0058387 Dnmt3b protein_coding protein_coding MGP_BALBcJ_T0058388.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152293509 152295668 + Dnmt3b protein_coding retained_intron MGP_BALBcJ_T0058389.1 MGP_BALBcJ_G0026672.1 mouse_genomes_project 2 152297078 152298126 + Dnmt3b protein_coding retained_intron MGP_BALBcJ_T0007301.1 MGP_BALBcJ_G0005983.1 mouse_genomes_project 2 126495381 126497359 - Gm14012 lincRNA lincRNA MGP_BALBcJ_T0059683.1 MGP_BALBcJ_G0026971.1 mouse_genomes_project 2 179887000 179891345 + MGP_BALBcJ_P0059683 Mrgbp protein_coding protein_coding MGP_BALBcJ_T0059684.1 MGP_BALBcJ_G0026971.1 mouse_genomes_project 2 179888408 179891998 + MGP_BALBcJ_P0059684 Mrgbp protein_coding protein_coding MGP_BALBcJ_T0059685.1 MGP_BALBcJ_G0026971.1 mouse_genomes_project 2 179888419 179892016 + Mrgbp protein_coding retained_intron MGP_BALBcJ_T0059686.1 MGP_BALBcJ_G0026971.1 mouse_genomes_project 2 179888422 179892016 + Mrgbp protein_coding retained_intron MGP_BALBcJ_T0059687.1 MGP_BALBcJ_G0026971.1 mouse_genomes_project 2 179888428 179892016 + Mrgbp protein_coding retained_intron MGP_BALBcJ_T0059688.1 MGP_BALBcJ_G0026971.1 mouse_genomes_project 2 179888454 179892016 + Mrgbp protein_coding retained_intron MGP_BALBcJ_T0054442.1 MGP_BALBcJ_G0025639.1 mouse_genomes_project 2 33720535 33721465 + MGP_BALBcJ_P0054442 Olfr339 protein_coding protein_coding MGP_BALBcJ_T0052288.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 426286 451397 - MGP_BALBcJ_P0052288 protein_coding protein_coding MGP_BALBcJ_T0052289.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 426412 427599 - protein_coding retained_intron MGP_BALBcJ_T0052290.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 428394 429479 - protein_coding retained_intron MGP_BALBcJ_T0052291.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 433801 436321 - protein_coding retained_intron MGP_BALBcJ_T0052292.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 438717 441645 - protein_coding retained_intron MGP_BALBcJ_T0052293.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 443109 451340 - MGP_BALBcJ_P0052293 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052294.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 444991 451373 - MGP_BALBcJ_P0052294 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052295.1 MGP_BALBcJ_G0025282.1 mouse_genomes_project 2 449470 451326 - protein_coding retained_intron MGP_BALBcJ_T0102379.1 MGP_BALBcJ_G0040195.1 mouse_genomes_project 2 8949995 8965633 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0017848.1 MGP_BALBcJ_G0015418.1 mouse_genomes_project 2 150937696 150967787 + Gm14164 processed_transcript processed_transcript MGP_BALBcJ_T0017849.1 MGP_BALBcJ_G0015418.1 mouse_genomes_project 2 150967210 150967612 + Gm14164 processed_transcript processed_transcript MGP_BALBcJ_T0053577.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26393157 26448533 - MGP_BALBcJ_P0053577 Ntng2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053578.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26393410 26448507 - MGP_BALBcJ_P0053578 Ntng2 protein_coding protein_coding MGP_BALBcJ_T0053579.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26393437 26448448 - MGP_BALBcJ_P0053579 Ntng2 protein_coding protein_coding MGP_BALBcJ_T0053580.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26393437 26448448 - MGP_BALBcJ_P0053580 Ntng2 protein_coding protein_coding MGP_BALBcJ_T0053581.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26393437 26448448 - MGP_BALBcJ_P0053581 Ntng2 protein_coding protein_coding MGP_BALBcJ_T0053582.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26397082 26402639 - Ntng2 protein_coding processed_transcript MGP_BALBcJ_T0053583.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26397255 26403537 - Ntng2 protein_coding processed_transcript MGP_BALBcJ_T0053584.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26399176 26402639 - Ntng2 protein_coding processed_transcript MGP_BALBcJ_T0053585.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26399290 26403537 - Ntng2 protein_coding processed_transcript MGP_BALBcJ_T0053586.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26402436 26453414 - MGP_BALBcJ_P0053586 Ntng2 protein_coding protein_coding MGP_BALBcJ_T0053587.1 MGP_BALBcJ_G0025511.1 mouse_genomes_project 2 26429876 26448540 - Ntng2 protein_coding processed_transcript MGP_BALBcJ_T0001092.1 MGP_BALBcJ_G0001019.1 mouse_genomes_project 2 127469703 127471646 - TEC TEC MGP_BALBcJ_T0059328.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165897805 165947326 - MGP_BALBcJ_P0059328 Stau1 protein_coding protein_coding MGP_BALBcJ_T0059329.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165898403 165906162 - Stau1 protein_coding retained_intron MGP_BALBcJ_T0059330.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165898403 165947313 - MGP_BALBcJ_P0059330 Stau1 protein_coding protein_coding MGP_BALBcJ_T0059331.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165898403 165947151 - MGP_BALBcJ_P0059331 Stau1 protein_coding protein_coding MGP_BALBcJ_T0059332.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165898529 165947347 - MGP_BALBcJ_P0059332 Stau1 protein_coding protein_coding MGP_BALBcJ_T0059333.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165899502 165901488 - Stau1 protein_coding retained_intron MGP_BALBcJ_T0059334.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165899548 165915493 - MGP_BALBcJ_P0059334 Stau1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059335.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165899950 165901213 - Stau1 protein_coding retained_intron MGP_BALBcJ_T0059336.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165902560 165911100 - Stau1 protein_coding retained_intron MGP_BALBcJ_T0059337.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165903685 165914218 - Stau1 protein_coding retained_intron MGP_BALBcJ_T0059338.1 MGP_BALBcJ_G0026881.1 mouse_genomes_project 2 165914283 165927600 - Stau1 protein_coding processed_transcript MGP_BALBcJ_T0058313.1 MGP_BALBcJ_G0026655.1 mouse_genomes_project 2 151520149 151531706 + MGP_BALBcJ_P0058313 Mylk2 protein_coding protein_coding MGP_BALBcJ_T0059720.1 MGP_BALBcJ_G0026980.1 mouse_genomes_project 2 180242845 180247837 + Birc7 protein_coding retained_intron MGP_BALBcJ_T0059721.1 MGP_BALBcJ_G0026980.1 mouse_genomes_project 2 180242845 180247840 + MGP_BALBcJ_P0059721 Birc7 protein_coding protein_coding MGP_BALBcJ_T0056614.1 MGP_BALBcJ_G0026234.1 mouse_genomes_project 2 109441518 109442457 + MGP_BALBcJ_P0056614 Olfr1288 protein_coding protein_coding MGP_BALBcJ_T0055733.1 MGP_BALBcJ_G0025947.1 mouse_genomes_project 2 84141945 84142893 - MGP_BALBcJ_P0055733 Olfr1079 protein_coding protein_coding MGP_BALBcJ_T0055734.1 MGP_BALBcJ_G0025947.1 mouse_genomes_project 2 84141945 84146480 - MGP_BALBcJ_P0055734 Olfr1079 protein_coding protein_coding MGP_BALBcJ_T0010382.1 MGP_BALBcJ_G0008507.1 mouse_genomes_project 2 29437356 29437435 + Gm27805 miRNA miRNA MGP_BALBcJ_T0013589.1 MGP_BALBcJ_G0011686.1 mouse_genomes_project 2 75556471 75557265 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057649.1 MGP_BALBcJ_G0026482.1 mouse_genomes_project 2 128843833 128948129 + MGP_BALBcJ_P0057649 Ptpra protein_coding protein_coding MGP_BALBcJ_T0057650.1 MGP_BALBcJ_G0026482.1 mouse_genomes_project 2 128866425 128947574 + MGP_BALBcJ_P0057650 Ptpra protein_coding protein_coding MGP_BALBcJ_T0013801.1 MGP_BALBcJ_G0011898.1 mouse_genomes_project 2 151211326 151211543 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056343.1 MGP_BALBcJ_G0026166.1 mouse_genomes_project 2 100360301 100363435 - MGP_BALBcJ_P0056343 Fjx1 protein_coding protein_coding MGP_BALBcJ_T0007248.1 MGP_BALBcJ_G0005940.1 mouse_genomes_project 2 92582119 92583845 - Gm13793 lincRNA lincRNA MGP_BALBcJ_T0057960.1 MGP_BALBcJ_G0026549.1 mouse_genomes_project 2 141134017 141416383 - MGP_BALBcJ_P0057960 Kif16b protein_coding protein_coding MGP_BALBcJ_T0057961.1 MGP_BALBcJ_G0026549.1 mouse_genomes_project 2 141134883 141416223 - MGP_BALBcJ_P0057961 Kif16b protein_coding unknown_likely_coding MGP_BALBcJ_T0057962.1 MGP_BALBcJ_G0026549.1 mouse_genomes_project 2 141135254 141165303 - Kif16b protein_coding retained_intron MGP_BALBcJ_T0003866.1 MGP_BALBcJ_G0003461.1 mouse_genomes_project 2 411403 417337 + Gm13184 antisense antisense MGP_BALBcJ_T0017843.1 MGP_BALBcJ_G0015414.1 mouse_genomes_project 2 137754209 138164376 - processed_transcript processed_transcript MGP_BALBcJ_T0013753.1 MGP_BALBcJ_G0011850.1 mouse_genomes_project 2 137404936 137405250 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055723.1 MGP_BALBcJ_G0025937.1 mouse_genomes_project 2 83901934 83902876 - MGP_BALBcJ_P0055723 Olfr1053 protein_coding protein_coding MGP_BALBcJ_T0102404.1 MGP_BALBcJ_G0040220.1 mouse_genomes_project 2 83340037 83340725 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058341.1 MGP_BALBcJ_G0026662.1 mouse_genomes_project 2 151720248 151763360 + MGP_BALBcJ_P0058341 Hck protein_coding protein_coding MGP_BALBcJ_T0058342.1 MGP_BALBcJ_G0026662.1 mouse_genomes_project 2 151720248 151763362 + MGP_BALBcJ_P0058342 Hck protein_coding protein_coding MGP_BALBcJ_T0056391.1 MGP_BALBcJ_G0026175.1 mouse_genomes_project 2 101486446 101640772 + MGP_BALBcJ_P0056391 Abtb2 protein_coding protein_coding MGP_BALBcJ_T0056392.1 MGP_BALBcJ_G0026175.1 mouse_genomes_project 2 101637383 101639566 + Abtb2 protein_coding processed_transcript MGP_BALBcJ_T0056393.1 MGP_BALBcJ_G0026175.1 mouse_genomes_project 2 101637429 101640772 + Abtb2 protein_coding processed_transcript MGP_BALBcJ_T0013479.1 MGP_BALBcJ_G0011576.1 mouse_genomes_project 2 35766733 35766868 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056689.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112074143 112148661 - MGP_BALBcJ_P0056689 Aqr protein_coding protein_coding MGP_BALBcJ_T0056690.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112078135 112148599 - MGP_BALBcJ_P0056690 Aqr protein_coding protein_coding MGP_BALBcJ_T0056691.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112085094 112092156 - Aqr protein_coding processed_transcript MGP_BALBcJ_T0056692.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112105948 112114100 - Aqr protein_coding processed_transcript MGP_BALBcJ_T0056693.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112106329 112148568 - Aqr protein_coding processed_transcript MGP_BALBcJ_T0056694.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112125629 112148660 - Aqr protein_coding processed_transcript MGP_BALBcJ_T0056695.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112131719 112148660 - Aqr protein_coding processed_transcript MGP_BALBcJ_T0056696.1 MGP_BALBcJ_G0026276.1 mouse_genomes_project 2 112143151 112148738 - Aqr protein_coding processed_transcript MGP_BALBcJ_T0001045.1 MGP_BALBcJ_G0000973.1 mouse_genomes_project 2 12032267 12034204 + TEC TEC MGP_BALBcJ_T0017696.1 MGP_BALBcJ_G0015334.1 mouse_genomes_project 2 11586756 11610052 + Gm13266 processed_transcript retained_intron MGP_BALBcJ_T0017697.1 MGP_BALBcJ_G0015334.1 mouse_genomes_project 2 11586756 11617076 + Gm13266 processed_transcript lincRNA MGP_BALBcJ_T0017698.1 MGP_BALBcJ_G0015334.1 mouse_genomes_project 2 11586764 11609872 + Gm13266 processed_transcript lincRNA MGP_BALBcJ_T0013743.1 MGP_BALBcJ_G0011840.1 mouse_genomes_project 2 131112621 131113076 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013501.1 MGP_BALBcJ_G0011598.1 mouse_genomes_project 2 45576423 45576856 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013851.1 MGP_BALBcJ_G0011948.1 mouse_genomes_project 2 167414802 167415647 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059064.1 MGP_BALBcJ_G0026814.1 mouse_genomes_project 2 163055959 163057811 - MGP_BALBcJ_P0059064 Wfdc12 protein_coding protein_coding MGP_BALBcJ_T0058528.1 MGP_BALBcJ_G0026710.1 mouse_genomes_project 2 154243531 154268032 - MGP_BALBcJ_P0058528 Ggt7 protein_coding protein_coding MGP_BALBcJ_T0058529.1 MGP_BALBcJ_G0026710.1 mouse_genomes_project 2 154248113 154252547 - Ggt7 protein_coding retained_intron MGP_BALBcJ_T0058530.1 MGP_BALBcJ_G0026710.1 mouse_genomes_project 2 154249182 154256349 - Ggt7 protein_coding retained_intron MGP_BALBcJ_T0058531.1 MGP_BALBcJ_G0026710.1 mouse_genomes_project 2 154254147 154260155 - MGP_BALBcJ_P0058531 Ggt7 protein_coding protein_coding MGP_BALBcJ_T0058532.1 MGP_BALBcJ_G0026710.1 mouse_genomes_project 2 154257977 154272478 - MGP_BALBcJ_P0058532 Ggt7 protein_coding protein_coding MGP_BALBcJ_T0054526.1 MGP_BALBcJ_G0025674.1 mouse_genomes_project 2 35788463 35871595 + MGP_BALBcJ_P0054526 Nek6 protein_coding protein_coding MGP_BALBcJ_T0054527.1 MGP_BALBcJ_G0025674.1 mouse_genomes_project 2 35788488 35864469 + MGP_BALBcJ_P0054527 Nek6 protein_coding protein_coding MGP_BALBcJ_T0054528.1 MGP_BALBcJ_G0025674.1 mouse_genomes_project 2 35788634 35862755 + MGP_BALBcJ_P0054528 Nek6 protein_coding protein_coding MGP_BALBcJ_T0054529.1 MGP_BALBcJ_G0025674.1 mouse_genomes_project 2 35791401 35836021 + MGP_BALBcJ_P0054529 Nek6 protein_coding protein_coding MGP_BALBcJ_T0054530.1 MGP_BALBcJ_G0025674.1 mouse_genomes_project 2 35791446 35839082 + MGP_BALBcJ_P0054530 Nek6 protein_coding protein_coding MGP_BALBcJ_T0017844.1 MGP_BALBcJ_G0015415.1 mouse_genomes_project 2 144193713 144234297 + BC039771 processed_transcript processed_transcript MGP_BALBcJ_T0017845.1 MGP_BALBcJ_G0015415.1 mouse_genomes_project 2 144220502 144273518 + BC039771 processed_transcript processed_transcript MGP_BALBcJ_T0053206.1 MGP_BALBcJ_G0025443.1 mouse_genomes_project 2 22895223 22898486 + MGP_BALBcJ_P0053206 Lcn11 protein_coding protein_coding MGP_BALBcJ_T0013468.1 MGP_BALBcJ_G0011565.1 mouse_genomes_project 2 32794481 32795003 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099703.1 MGP_BALBcJ_G0037739.1 mouse_genomes_project 2 134492297 134492398 - Gm26227 snRNA snRNA MGP_BALBcJ_T0013460.1 MGP_BALBcJ_G0011557.1 mouse_genomes_project 2 29522131 29522849 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059674.1 MGP_BALBcJ_G0026967.1 mouse_genomes_project 2 179581407 179593645 - MGP_BALBcJ_P0059674 Rbbp8nl protein_coding protein_coding MGP_BALBcJ_T0004005.1 MGP_BALBcJ_G0003565.1 mouse_genomes_project 2 72271174 72280467 - Hoxd3os1 antisense antisense MGP_BALBcJ_T0004006.1 MGP_BALBcJ_G0003565.1 mouse_genomes_project 2 72278160 72280939 - Hoxd3os1 antisense antisense MGP_BALBcJ_T0004007.1 MGP_BALBcJ_G0003565.1 mouse_genomes_project 2 72278310 72284406 - Hoxd3os1 antisense antisense MGP_BALBcJ_T0004008.1 MGP_BALBcJ_G0003565.1 mouse_genomes_project 2 72281538 72284540 - Hoxd3os1 antisense antisense MGP_BALBcJ_T0054531.1 MGP_BALBcJ_G0025675.1 mouse_genomes_project 2 35865024 35920604 - MGP_BALBcJ_P0054531 Psmb7 protein_coding protein_coding MGP_BALBcJ_T0054532.1 MGP_BALBcJ_G0025675.1 mouse_genomes_project 2 35888099 35920437 - Psmb7 protein_coding retained_intron MGP_BALBcJ_T0013697.1 MGP_BALBcJ_G0011794.1 mouse_genomes_project 2 109815878 109816693 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052715.1 MGP_BALBcJ_G0025349.1 mouse_genomes_project 2 15752669 15763409 + MGP_BALBcJ_P0052715 Bmi1 protein_coding protein_coding MGP_BALBcJ_T0052716.1 MGP_BALBcJ_G0025349.1 mouse_genomes_project 2 15752874 15757850 + Bmi1 protein_coding processed_transcript MGP_BALBcJ_T0052717.1 MGP_BALBcJ_G0025349.1 mouse_genomes_project 2 15753300 15759161 + MGP_BALBcJ_P0052717 Bmi1 protein_coding protein_coding MGP_BALBcJ_T0052718.1 MGP_BALBcJ_G0025349.1 mouse_genomes_project 2 15755863 15759498 + MGP_BALBcJ_P0052718 Bmi1 protein_coding protein_coding MGP_BALBcJ_T0052719.1 MGP_BALBcJ_G0025349.1 mouse_genomes_project 2 15756478 15758515 + MGP_BALBcJ_P0052719 Bmi1 protein_coding protein_coding MGP_BALBcJ_T0052720.1 MGP_BALBcJ_G0025349.1 mouse_genomes_project 2 15756591 15758341 + MGP_BALBcJ_P0052720 Bmi1 protein_coding protein_coding MGP_BALBcJ_T0055946.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614835 88634857 + MGP_BALBcJ_P0055946 Mtch2 protein_coding protein_coding MGP_BALBcJ_T0055947.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614858 88633435 + MGP_BALBcJ_P0055947 Mtch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055948.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614870 88615995 + Mtch2 protein_coding processed_transcript MGP_BALBcJ_T0055949.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614911 88634687 + MGP_BALBcJ_P0055949 Mtch2 protein_coding protein_coding MGP_BALBcJ_T0055950.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614933 88619301 + Mtch2 protein_coding retained_intron MGP_BALBcJ_T0055951.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614953 88634687 + MGP_BALBcJ_P0055951 Mtch2 protein_coding protein_coding MGP_BALBcJ_T0055952.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88614967 88633438 + Mtch2 protein_coding processed_transcript MGP_BALBcJ_T0055953.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88619871 88623428 + Mtch2 protein_coding retained_intron MGP_BALBcJ_T0055954.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88620506 88624545 + Mtch2 protein_coding retained_intron MGP_BALBcJ_T0055955.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88629286 88633518 + Mtch2 protein_coding retained_intron MGP_BALBcJ_T0055956.1 MGP_BALBcJ_G0026103.1 mouse_genomes_project 2 88631505 88633435 + Mtch2 protein_coding retained_intron MGP_BALBcJ_T0053755.1 MGP_BALBcJ_G0025537.1 mouse_genomes_project 2 27492844 27494948 - MGP_BALBcJ_P0053755 Dolk protein_coding protein_coding MGP_BALBcJ_T0053165.1 MGP_BALBcJ_G0025429.1 mouse_genomes_project 2 22682613 22684408 - MGP_BALBcJ_P0053165 Phpt1 protein_coding protein_coding MGP_BALBcJ_T0053166.1 MGP_BALBcJ_G0025429.1 mouse_genomes_project 2 22682685 22684062 - Phpt1 protein_coding processed_transcript MGP_BALBcJ_T0007195.1 MGP_BALBcJ_G0005898.1 mouse_genomes_project 2 64634396 64645315 + Gm1322 lincRNA lincRNA MGP_BALBcJ_T0052795.1 MGP_BALBcJ_G0025365.1 mouse_genomes_project 2 19782393 19844565 + Apbb1ip protein_coding processed_transcript MGP_BALBcJ_T0052796.1 MGP_BALBcJ_G0025365.1 mouse_genomes_project 2 19782689 19860811 + Apbb1ip protein_coding processed_transcript MGP_BALBcJ_T0052797.1 MGP_BALBcJ_G0025365.1 mouse_genomes_project 2 19782744 19837007 + Apbb1ip protein_coding retained_intron MGP_BALBcJ_T0052798.1 MGP_BALBcJ_G0025365.1 mouse_genomes_project 2 19814610 19880688 + MGP_BALBcJ_P0052798 Apbb1ip protein_coding protein_coding MGP_BALBcJ_T0003913.1 MGP_BALBcJ_G0003496.1 mouse_genomes_project 2 23772867 23778272 + Snhg7os antisense antisense MGP_BALBcJ_T0003914.1 MGP_BALBcJ_G0003496.1 mouse_genomes_project 2 23775642 23778272 + Snhg7os antisense antisense MGP_BALBcJ_T0003915.1 MGP_BALBcJ_G0003496.1 mouse_genomes_project 2 23776216 23778272 + Snhg7os antisense antisense MGP_BALBcJ_T0057073.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119051906 119060321 + MGP_BALBcJ_P0057073 Ccndbp1 protein_coding protein_coding MGP_BALBcJ_T0057074.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119051935 119058552 + MGP_BALBcJ_P0057074 Ccndbp1 protein_coding protein_coding MGP_BALBcJ_T0057075.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119051951 119060321 + MGP_BALBcJ_P0057075 Ccndbp1 protein_coding protein_coding MGP_BALBcJ_T0057076.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119051970 119056368 + Ccndbp1 protein_coding processed_transcript MGP_BALBcJ_T0057077.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119051975 119059930 + MGP_BALBcJ_P0057077 Ccndbp1 protein_coding protein_coding MGP_BALBcJ_T0057078.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119052207 119054079 + Ccndbp1 protein_coding retained_intron MGP_BALBcJ_T0057079.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119054460 119055176 + Ccndbp1 protein_coding retained_intron MGP_BALBcJ_T0057080.1 MGP_BALBcJ_G0026351.1 mouse_genomes_project 2 119055910 119056380 + Ccndbp1 protein_coding processed_transcript MGP_BALBcJ_T0059239.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164202370 164236056 - MGP_BALBcJ_P0059239 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059240.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164203494 164241709 - MGP_BALBcJ_P0059240 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059241.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164203494 164212194 - MGP_BALBcJ_P0059241 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059242.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164203494 164241709 - MGP_BALBcJ_P0059242 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059243.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164205451 164241709 - MGP_BALBcJ_P0059243 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059244.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164205456 164232133 - MGP_BALBcJ_P0059244 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059245.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164213495 164229536 - Elmo2 protein_coding processed_transcript MGP_BALBcJ_T0059246.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164213884 164226949 - MGP_BALBcJ_P0059246 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059247.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164219892 164226839 - Elmo2 protein_coding retained_intron MGP_BALBcJ_T0059248.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164224109 164231581 - MGP_BALBcJ_P0059248 Elmo2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059249.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164226876 164231805 - MGP_BALBcJ_P0059249 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0059250.1 MGP_BALBcJ_G0026866.1 mouse_genomes_project 2 164230901 164241709 - MGP_BALBcJ_P0059250 Elmo2 protein_coding protein_coding MGP_BALBcJ_T0054692.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47737353 47754163 - Mmadhc protein_coding processed_transcript MGP_BALBcJ_T0054693.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47737353 47754185 - MGP_BALBcJ_P0054693 Mmadhc protein_coding protein_coding MGP_BALBcJ_T0054694.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47737822 47754155 - Mmadhc protein_coding processed_transcript MGP_BALBcJ_T0054695.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47738613 47754149 - MGP_BALBcJ_P0054695 Mmadhc protein_coding protein_coding MGP_BALBcJ_T0054696.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47738626 47753891 - Mmadhc protein_coding processed_transcript MGP_BALBcJ_T0054697.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47738638 47746667 - Mmadhc protein_coding processed_transcript MGP_BALBcJ_T0054698.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47745320 47754144 - Mmadhc protein_coding processed_transcript MGP_BALBcJ_T0054699.1 MGP_BALBcJ_G0025697.1 mouse_genomes_project 2 47745333 47754269 - MGP_BALBcJ_P0054699 Mmadhc protein_coding protein_coding MGP_BALBcJ_T0057487.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125843752 125863877 + MGP_BALBcJ_P0057487 Mrps5 protein_coding protein_coding MGP_BALBcJ_T0057488.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125843949 125861570 + Mrps5 protein_coding retained_intron MGP_BALBcJ_T0057489.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125843949 125852613 + Mrps5 protein_coding retained_intron MGP_BALBcJ_T0057490.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125846971 125852251 + MGP_BALBcJ_P0057490 Mrps5 protein_coding protein_coding MGP_BALBcJ_T0057491.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125852228 125854932 + Mrps5 protein_coding retained_intron MGP_BALBcJ_T0057492.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125856381 125860903 + Mrps5 protein_coding retained_intron MGP_BALBcJ_T0057493.1 MGP_BALBcJ_G0026440.1 mouse_genomes_project 2 125856588 125857801 + Mrps5 protein_coding retained_intron MGP_BALBcJ_T0010443.1 MGP_BALBcJ_G0008568.1 mouse_genomes_project 2 132039243 132039330 + Mir3090 miRNA miRNA MGP_BALBcJ_T0057370.1 MGP_BALBcJ_G0026414.1 mouse_genomes_project 2 124547915 124727188 - MGP_BALBcJ_P0057370 Atp8b4 protein_coding protein_coding MGP_BALBcJ_T0057371.1 MGP_BALBcJ_G0026414.1 mouse_genomes_project 2 124549478 124718969 - MGP_BALBcJ_P0057371 Atp8b4 protein_coding protein_coding MGP_BALBcJ_T0057372.1 MGP_BALBcJ_G0026414.1 mouse_genomes_project 2 124597718 124718949 - Atp8b4 protein_coding retained_intron MGP_BALBcJ_T0057373.1 MGP_BALBcJ_G0026414.1 mouse_genomes_project 2 124597764 124727330 - MGP_BALBcJ_P0057373 Atp8b4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057374.1 MGP_BALBcJ_G0026414.1 mouse_genomes_project 2 124619501 124728015 - MGP_BALBcJ_P0057374 Atp8b4 protein_coding protein_coding MGP_BALBcJ_T0003973.1 MGP_BALBcJ_G0003543.1 mouse_genomes_project 2 63393308 63406134 - Gm13617 antisense antisense MGP_BALBcJ_T0013866.1 MGP_BALBcJ_G0011963.1 mouse_genomes_project 2 181060737 181061638 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098756.1 MGP_BALBcJ_G0036810.1 mouse_genomes_project 2 155744511 155744647 - Gm27653 scaRNA scaRNA MGP_BALBcJ_T0055802.1 MGP_BALBcJ_G0026005.1 mouse_genomes_project 2 85633014 85633971 + MGP_BALBcJ_P0055802 Olfr1153 protein_coding protein_coding MGP_BALBcJ_T0004172.1 MGP_BALBcJ_G0003684.1 mouse_genomes_project 2 179397564 179399154 + Gm17180 antisense antisense MGP_BALBcJ_T0003926.1 MGP_BALBcJ_G0003505.1 mouse_genomes_project 2 27626500 27628123 + Gm16323 antisense antisense MGP_BALBcJ_T0102438.1 MGP_BALBcJ_G0040254.1 mouse_genomes_project 2 120618745 120619021 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102420.1 MGP_BALBcJ_G0040236.1 mouse_genomes_project 2 85572423 85573361 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010462.1 MGP_BALBcJ_G0008587.1 mouse_genomes_project 2 166614105 166614201 - Gm22355 miRNA miRNA MGP_BALBcJ_T0013767.1 MGP_BALBcJ_G0011864.1 mouse_genomes_project 2 142388992 142389325 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010472.1 MGP_BALBcJ_G0008597.1 mouse_genomes_project 2 179478207 179478276 - Mir7005 miRNA miRNA MGP_BALBcJ_T0052264.1 MGP_BALBcJ_G0025277.1 mouse_genomes_project 2 273935 278761 + MGP_BALBcJ_P0052264 Acbd7 protein_coding protein_coding MGP_BALBcJ_T0052265.1 MGP_BALBcJ_G0025277.1 mouse_genomes_project 2 273977 278539 + MGP_BALBcJ_P0052265 Acbd7 protein_coding unknown_likely_coding MGP_BALBcJ_T0057860.1 MGP_BALBcJ_G0026528.1 mouse_genomes_project 2 132975324 133027288 - MGP_BALBcJ_P0057860 Hao1 protein_coding protein_coding MGP_BALBcJ_T0057861.1 MGP_BALBcJ_G0026528.1 mouse_genomes_project 2 133001664 133027227 - Hao1 protein_coding processed_transcript MGP_BALBcJ_T0007306.1 MGP_BALBcJ_G0005986.1 mouse_genomes_project 2 130875327 130902055 + 4921508D12Rik lincRNA lincRNA MGP_BALBcJ_T0013494.1 MGP_BALBcJ_G0011591.1 mouse_genomes_project 2 38321540 38321893 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010420.1 MGP_BALBcJ_G0008545.1 mouse_genomes_project 2 92078795 92078885 - Mir129-2 miRNA miRNA MGP_BALBcJ_T0007332.1 MGP_BALBcJ_G0006008.1 mouse_genomes_project 2 148308747 148367090 - Gm14133 lincRNA lincRNA MGP_BALBcJ_T0007333.1 MGP_BALBcJ_G0006008.1 mouse_genomes_project 2 148319291 148367132 - Gm14133 lincRNA lincRNA MGP_BALBcJ_T0056000.1 MGP_BALBcJ_G0026111.1 mouse_genomes_project 2 88856451 88903179 + MGP_BALBcJ_P0056000 Spi1 protein_coding protein_coding MGP_BALBcJ_T0056001.1 MGP_BALBcJ_G0026111.1 mouse_genomes_project 2 88856469 88864382 + Spi1 protein_coding processed_transcript MGP_BALBcJ_T0056002.1 MGP_BALBcJ_G0026111.1 mouse_genomes_project 2 88870269 88904563 + MGP_BALBcJ_P0056002 Spi1 protein_coding protein_coding MGP_BALBcJ_T0056003.1 MGP_BALBcJ_G0026111.1 mouse_genomes_project 2 88870953 88902128 + MGP_BALBcJ_P0056003 Spi1 protein_coding protein_coding MGP_BALBcJ_T0054281.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31967729 32055291 - MGP_BALBcJ_P0054281 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054282.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31969311 32053412 - MGP_BALBcJ_P0054282 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054283.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31970120 32053507 - MGP_BALBcJ_P0054283 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054284.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31970120 32053507 - MGP_BALBcJ_P0054284 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054285.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31970618 31997679 - MGP_BALBcJ_P0054285 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054286.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31971029 31976642 - MGP_BALBcJ_P0054286 Gapvd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054287.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31986508 31997939 - Gapvd1 protein_coding processed_transcript MGP_BALBcJ_T0054288.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31990096 31994396 - Gapvd1 protein_coding retained_intron MGP_BALBcJ_T0054289.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31993166 32024198 - MGP_BALBcJ_P0054289 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054290.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31993187 32024101 - MGP_BALBcJ_P0054290 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0054291.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31997595 32005807 - MGP_BALBcJ_P0054291 Gapvd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054292.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 31997639 32005922 - Gapvd1 protein_coding processed_transcript MGP_BALBcJ_T0054293.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 32002816 32006318 - Gapvd1 protein_coding retained_intron MGP_BALBcJ_T0054294.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 32020823 32053371 - Gapvd1 protein_coding retained_intron MGP_BALBcJ_T0054295.1 MGP_BALBcJ_G0025613.1 mouse_genomes_project 2 32024171 32053357 - MGP_BALBcJ_P0054295 Gapvd1 protein_coding protein_coding MGP_BALBcJ_T0013683.1 MGP_BALBcJ_G0011780.1 mouse_genomes_project 2 106499004 106499935 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057905.1 MGP_BALBcJ_G0026535.1 mouse_genomes_project 2 135185302 135254181 + MGP_BALBcJ_P0057905 Snap25 protein_coding protein_coding MGP_BALBcJ_T0057906.1 MGP_BALBcJ_G0026535.1 mouse_genomes_project 2 135185303 135234726 + Snap25 protein_coding retained_intron MGP_BALBcJ_T0057907.1 MGP_BALBcJ_G0026535.1 mouse_genomes_project 2 135185327 135253104 + MGP_BALBcJ_P0057907 Snap25 protein_coding protein_coding MGP_BALBcJ_T0058252.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150907598 150914262 - Rbck1 protein_coding retained_intron MGP_BALBcJ_T0058253.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150907598 150923677 - MGP_BALBcJ_P0058253 Rbck1 protein_coding protein_coding MGP_BALBcJ_T0058254.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150907598 150923918 - MGP_BALBcJ_P0058254 Rbck1 protein_coding protein_coding MGP_BALBcJ_T0058255.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150909576 150914763 - Rbck1 protein_coding retained_intron MGP_BALBcJ_T0058256.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150910044 150915629 - MGP_BALBcJ_P0058256 Rbck1 protein_coding protein_coding MGP_BALBcJ_T0058257.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150914202 150915881 - Rbck1 protein_coding retained_intron MGP_BALBcJ_T0058258.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150915804 150919022 - Rbck1 protein_coding processed_transcript MGP_BALBcJ_T0058259.1 MGP_BALBcJ_G0026630.1 mouse_genomes_project 2 150917668 150923649 - Rbck1 protein_coding processed_transcript MGP_BALBcJ_T0004071.1 MGP_BALBcJ_G0003608.1 mouse_genomes_project 2 127823453 127824477 - Gm14041 antisense antisense MGP_BALBcJ_T0054795.1 MGP_BALBcJ_G0025719.1 mouse_genomes_project 2 55696096 55783588 - MGP_BALBcJ_P0054795 Acvr1c protein_coding protein_coding MGP_BALBcJ_T0054796.1 MGP_BALBcJ_G0025719.1 mouse_genomes_project 2 55696096 55783588 - MGP_BALBcJ_P0054796 Acvr1c protein_coding protein_coding MGP_BALBcJ_T0054797.1 MGP_BALBcJ_G0025719.1 mouse_genomes_project 2 55696279 55783516 - MGP_BALBcJ_P0054797 Acvr1c protein_coding protein_coding MGP_BALBcJ_T0054798.1 MGP_BALBcJ_G0025719.1 mouse_genomes_project 2 55717392 55747026 - MGP_BALBcJ_P0054798 Acvr1c protein_coding protein_coding MGP_BALBcJ_T0099683.1 MGP_BALBcJ_G0037719.1 mouse_genomes_project 2 78149031 78149134 + Gm24461 snRNA snRNA MGP_BALBcJ_T0054520.1 MGP_BALBcJ_G0025673.1 mouse_genomes_project 2 35614891 35629632 + Lhx2 protein_coding retained_intron MGP_BALBcJ_T0054521.1 MGP_BALBcJ_G0025673.1 mouse_genomes_project 2 35616495 35630764 + MGP_BALBcJ_P0054521 Lhx2 protein_coding protein_coding MGP_BALBcJ_T0054522.1 MGP_BALBcJ_G0025673.1 mouse_genomes_project 2 35627706 35630570 + MGP_BALBcJ_P0054522 Lhx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054523.1 MGP_BALBcJ_G0025673.1 mouse_genomes_project 2 35627712 35645968 + MGP_BALBcJ_P0054523 Lhx2 protein_coding protein_coding MGP_BALBcJ_T0054524.1 MGP_BALBcJ_G0025673.1 mouse_genomes_project 2 35628470 35630512 + MGP_BALBcJ_P0054524 Lhx2 protein_coding protein_coding MGP_BALBcJ_T0054525.1 MGP_BALBcJ_G0025673.1 mouse_genomes_project 2 35629740 35636029 + Lhx2 protein_coding retained_intron MGP_BALBcJ_T0057413.1 MGP_BALBcJ_G0026422.1 mouse_genomes_project 2 125133873 125176400 - MGP_BALBcJ_P0057413 Sppl2a protein_coding protein_coding MGP_BALBcJ_T0057414.1 MGP_BALBcJ_G0026422.1 mouse_genomes_project 2 125137746 125163532 - MGP_BALBcJ_P0057414 Sppl2a protein_coding protein_coding MGP_BALBcJ_T0057415.1 MGP_BALBcJ_G0026422.1 mouse_genomes_project 2 125158060 125166859 - Sppl2a protein_coding retained_intron MGP_BALBcJ_T0054199.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30202923 30239652 - MGP_BALBcJ_P0054199 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054200.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30202927 30240011 - MGP_BALBcJ_P0054200 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054201.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30207298 30219571 - MGP_BALBcJ_P0054201 Lrsam1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054202.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30213552 30216541 - Lrsam1 protein_coding retained_intron MGP_BALBcJ_T0054203.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30232617 30239996 - MGP_BALBcJ_P0054203 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054204.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30232619 30239989 - MGP_BALBcJ_P0054204 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054205.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30232632 30238303 - MGP_BALBcJ_P0054205 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054206.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30232636 30239648 - MGP_BALBcJ_P0054206 Lrsam1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054207.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30235645 30239990 - MGP_BALBcJ_P0054207 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054208.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30235652 30239990 - MGP_BALBcJ_P0054208 Lrsam1 protein_coding protein_coding MGP_BALBcJ_T0054209.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30238643 30239997 - Lrsam1 protein_coding processed_transcript MGP_BALBcJ_T0054210.1 MGP_BALBcJ_G0025601.1 mouse_genomes_project 2 30239470 30240003 - Lrsam1 protein_coding processed_transcript MGP_BALBcJ_T0057659.1 MGP_BALBcJ_G0026488.1 mouse_genomes_project 2 129027740 129032929 - MGP_BALBcJ_P0057659 Lzts3 protein_coding protein_coding MGP_BALBcJ_T0057660.1 MGP_BALBcJ_G0026488.1 mouse_genomes_project 2 129027740 129032929 - MGP_BALBcJ_P0057660 Lzts3 protein_coding protein_coding MGP_BALBcJ_T0057661.1 MGP_BALBcJ_G0026488.1 mouse_genomes_project 2 129027744 129037703 - MGP_BALBcJ_P0057661 Lzts3 protein_coding protein_coding MGP_BALBcJ_T0004048.1 MGP_BALBcJ_G0003590.1 mouse_genomes_project 2 114846917 114880040 - Gm13990 antisense antisense MGP_BALBcJ_T0056460.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102533372 102608006 + MGP_BALBcJ_P0056460 Cstf3 protein_coding protein_coding MGP_BALBcJ_T0056461.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102533381 102554441 + Cstf3 protein_coding retained_intron MGP_BALBcJ_T0056462.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102533476 102552460 + Cstf3 protein_coding retained_intron MGP_BALBcJ_T0056463.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102566585 102603375 + MGP_BALBcJ_P0056463 Cstf3 protein_coding unknown_likely_coding MGP_BALBcJ_T0056464.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102598266 102606015 + Cstf3 protein_coding processed_transcript MGP_BALBcJ_T0056466.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102605714 102606756 + Cstf3 protein_coding processed_transcript MGP_BALBcJ_T0056467.1 MGP_BALBcJ_G0026188.1 mouse_genomes_project 2 102606242 102607316 + Cstf3 protein_coding processed_transcript MGP_BALBcJ_T0013665.1 MGP_BALBcJ_G0011762.1 mouse_genomes_project 2 101459798 101460228 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007403.1 MGP_BALBcJ_G0006068.1 mouse_genomes_project 2 171369605 171371993 + Gm14275 lincRNA lincRNA MGP_BALBcJ_T0055331.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72084185 72142603 - MGP_BALBcJ_P0055331 Lnpk1 protein_coding protein_coding MGP_BALBcJ_T0055332.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72084228 72142603 - MGP_BALBcJ_P0055332 Lnpk1 protein_coding protein_coding MGP_BALBcJ_T0055333.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72084235 72096997 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055334.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72085227 72142586 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055335.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72085934 72141879 - MGP_BALBcJ_P0055335 Lnpk1 protein_coding protein_coding MGP_BALBcJ_T0055336.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72095799 72143034 - MGP_BALBcJ_P0055336 Lnpk1 protein_coding protein_coding MGP_BALBcJ_T0055337.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72101312 72142172 - MGP_BALBcJ_P0055337 Lnpk1 protein_coding protein_coding MGP_BALBcJ_T0055338.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72111128 72118750 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055339.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72111754 72143090 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055340.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72114805 72115648 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055341.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72115179 72142571 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055342.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72132508 72142535 - Lnpk1 protein_coding processed_transcript MGP_BALBcJ_T0055343.1 MGP_BALBcJ_G0025815.1 mouse_genomes_project 2 72132773 72142549 - MGP_BALBcJ_P0055343 Lnpk1 protein_coding protein_coding MGP_BALBcJ_T0055750.1 MGP_BALBcJ_G0025963.1 mouse_genomes_project 2 84661628 84662561 - MGP_BALBcJ_P0055750 Olfr1104 protein_coding protein_coding MGP_BALBcJ_T0057936.1 MGP_BALBcJ_G0026545.1 mouse_genomes_project 2 138669223 138702284 + MGP_BALBcJ_P0057936 Ndufaf5 protein_coding protein_coding MGP_BALBcJ_T0057937.1 MGP_BALBcJ_G0026545.1 mouse_genomes_project 2 138669287 138670889 + Ndufaf5 protein_coding retained_intron MGP_BALBcJ_T0057938.1 MGP_BALBcJ_G0026545.1 mouse_genomes_project 2 138669604 138702227 + Ndufaf5 protein_coding processed_transcript MGP_BALBcJ_T0013478.1 MGP_BALBcJ_G0011575.1 mouse_genomes_project 2 34953425 34954221 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057698.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129474687 129478139 - MGP_BALBcJ_P0057698 Gfra4 protein_coding protein_coding MGP_BALBcJ_T0057699.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129474694 129476508 - Gfra4 protein_coding retained_intron MGP_BALBcJ_T0057700.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129474695 129476562 - Gfra4 protein_coding retained_intron MGP_BALBcJ_T0057701.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129475233 129477733 - MGP_BALBcJ_P0057701 Gfra4 protein_coding protein_coding MGP_BALBcJ_T0057702.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129475265 129478139 - MGP_BALBcJ_P0057702 Gfra4 protein_coding protein_coding MGP_BALBcJ_T0057703.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129475265 129477733 - MGP_BALBcJ_P0057703 Gfra4 protein_coding protein_coding MGP_BALBcJ_T0057704.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129476282 129477733 - MGP_BALBcJ_P0057704 Gfra4 protein_coding protein_coding MGP_BALBcJ_T0057705.1 MGP_BALBcJ_G0026494.1 mouse_genomes_project 2 129476282 129478139 - MGP_BALBcJ_P0057705 Gfra4 protein_coding protein_coding MGP_BALBcJ_T0052821.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20076975 20123216 + MGP_BALBcJ_P0052821 Acbd5 protein_coding protein_coding MGP_BALBcJ_T0052822.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20077008 20123216 + MGP_BALBcJ_P0052822 Acbd5 protein_coding protein_coding MGP_BALBcJ_T0052823.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20077042 20084353 + MGP_BALBcJ_P0052823 Acbd5 protein_coding protein_coding MGP_BALBcJ_T0052824.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20077875 20123214 + MGP_BALBcJ_P0052824 Acbd5 protein_coding protein_coding MGP_BALBcJ_T0052825.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20077879 20123216 + MGP_BALBcJ_P0052825 Acbd5 protein_coding protein_coding MGP_BALBcJ_T0052826.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20077883 20123222 + MGP_BALBcJ_P0052826 Acbd5 protein_coding unknown_likely_coding MGP_BALBcJ_T0052827.1 MGP_BALBcJ_G0025368.1 mouse_genomes_project 2 20078134 20096348 + MGP_BALBcJ_P0052827 Acbd5 protein_coding protein_coding MGP_BALBcJ_T0059552.1 MGP_BALBcJ_G0026939.1 mouse_genomes_project 2 173234799 173247532 + MGP_BALBcJ_P0059552 Npepl1 protein_coding protein_coding MGP_BALBcJ_T0059553.1 MGP_BALBcJ_G0026939.1 mouse_genomes_project 2 173235604 173244842 + MGP_BALBcJ_P0059553 Npepl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059554.1 MGP_BALBcJ_G0026939.1 mouse_genomes_project 2 173235630 173247162 + Npepl1 protein_coding retained_intron MGP_BALBcJ_T0059555.1 MGP_BALBcJ_G0026939.1 mouse_genomes_project 2 173236023 173240553 + Npepl1 protein_coding retained_intron MGP_BALBcJ_T0057590.1 MGP_BALBcJ_G0026468.1 mouse_genomes_project 2 128088933 128117567 + MGP_BALBcJ_P0057590 Stk35 protein_coding protein_coding MGP_BALBcJ_T0057591.1 MGP_BALBcJ_G0026468.1 mouse_genomes_project 2 128088933 128120886 + MGP_BALBcJ_P0057591 Stk35 protein_coding protein_coding MGP_BALBcJ_T0055887.1 MGP_BALBcJ_G0026077.1 mouse_genomes_project 2 87422576 87423827 - MGP_BALBcJ_P0055887 Olfr1249 protein_coding protein_coding MGP_BALBcJ_T0013779.1 MGP_BALBcJ_G0011876.1 mouse_genomes_project 2 145686002 145686803 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054136.1 MGP_BALBcJ_G0025590.1 mouse_genomes_project 2 29919582 29955099 + MGP_BALBcJ_P0054136 Eng protein_coding protein_coding MGP_BALBcJ_T0054137.1 MGP_BALBcJ_G0025590.1 mouse_genomes_project 2 29919582 29955639 + MGP_BALBcJ_P0054137 Eng protein_coding protein_coding MGP_BALBcJ_T0054138.1 MGP_BALBcJ_G0025590.1 mouse_genomes_project 2 29919609 29955650 + MGP_BALBcJ_P0054138 Eng protein_coding protein_coding MGP_BALBcJ_T0054139.1 MGP_BALBcJ_G0025590.1 mouse_genomes_project 2 29919980 29923355 + Eng protein_coding processed_transcript MGP_BALBcJ_T0054140.1 MGP_BALBcJ_G0025590.1 mouse_genomes_project 2 29945801 29946704 + Eng protein_coding retained_intron MGP_BALBcJ_T0054141.1 MGP_BALBcJ_G0025590.1 mouse_genomes_project 2 29946324 29954236 + MGP_BALBcJ_P0054141 Eng protein_coding protein_coding MGP_BALBcJ_T0055214.1 MGP_BALBcJ_G0025794.1 mouse_genomes_project 2 68884305 68940350 + MGP_BALBcJ_P0055214 Hat1 protein_coding protein_coding MGP_BALBcJ_T0055215.1 MGP_BALBcJ_G0025794.1 mouse_genomes_project 2 68884607 68940350 + MGP_BALBcJ_P0055215 Hat1 protein_coding protein_coding MGP_BALBcJ_T0055216.1 MGP_BALBcJ_G0025794.1 mouse_genomes_project 2 68904364 68907520 + Hat1 protein_coding processed_transcript MGP_BALBcJ_T0055217.1 MGP_BALBcJ_G0025794.1 mouse_genomes_project 2 68916265 68937231 + Hat1 protein_coding processed_transcript MGP_BALBcJ_T0001066.1 MGP_BALBcJ_G0000994.1 mouse_genomes_project 2 35777319 35782176 + TEC TEC MGP_BALBcJ_T0054013.1 MGP_BALBcJ_G0025573.1 mouse_genomes_project 2 29520341 29526963 - MGP_BALBcJ_P0054013 Uck1 protein_coding protein_coding MGP_BALBcJ_T0054014.1 MGP_BALBcJ_G0025573.1 mouse_genomes_project 2 29520620 29523473 - Uck1 protein_coding retained_intron MGP_BALBcJ_T0054015.1 MGP_BALBcJ_G0025573.1 mouse_genomes_project 2 29523072 29526448 - MGP_BALBcJ_P0054015 Uck1 protein_coding protein_coding MGP_BALBcJ_T0054016.1 MGP_BALBcJ_G0025573.1 mouse_genomes_project 2 29524650 29526437 - Uck1 protein_coding retained_intron MGP_BALBcJ_T0054017.1 MGP_BALBcJ_G0025573.1 mouse_genomes_project 2 29524899 29526865 - Uck1 protein_coding retained_intron MGP_BALBcJ_T0098859.1 MGP_BALBcJ_G0036907.1 mouse_genomes_project 2 288887 291758 - Gm37525 sense_intronic sense_intronic MGP_BALBcJ_T0099662.1 MGP_BALBcJ_G0037698.1 mouse_genomes_project 2 22116119 22116223 - Gm24875 snRNA snRNA MGP_BALBcJ_T0053436.1 MGP_BALBcJ_G0025481.1 mouse_genomes_project 2 24205180 24215845 - MGP_BALBcJ_P0053436 Tmem8c protein_coding protein_coding MGP_BALBcJ_T0053437.1 MGP_BALBcJ_G0025481.1 mouse_genomes_project 2 24205182 24211534 - MGP_BALBcJ_P0053437 Tmem8c protein_coding protein_coding MGP_BALBcJ_T0101672.1 MGP_BALBcJ_G0039664.1 mouse_genomes_project 2 129210257 129210750 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0013760.1 MGP_BALBcJ_G0011857.1 mouse_genomes_project 2 140349401 140349895 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013693.1 MGP_BALBcJ_G0011790.1 mouse_genomes_project 2 109586265 109587204 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058328.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151620609 151627150 - MGP_BALBcJ_P0058328 Pdrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058329.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151620609 151627150 - MGP_BALBcJ_P0058329 Pdrg1 protein_coding protein_coding MGP_BALBcJ_T0058330.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151621190 151624213 - Pdrg1 protein_coding retained_intron MGP_BALBcJ_T0058331.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151622015 151627089 - MGP_BALBcJ_P0058331 Pdrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058332.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151623935 151627069 - Pdrg1 protein_coding retained_intron MGP_BALBcJ_T0058333.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151624105 151627085 - MGP_BALBcJ_P0058333 Pdrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058334.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151625073 151627100 - Pdrg1 protein_coding retained_intron MGP_BALBcJ_T0058335.1 MGP_BALBcJ_G0026659.1 mouse_genomes_project 2 151625737 151627065 - Pdrg1 protein_coding processed_transcript MGP_BALBcJ_T0054726.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49563696 49768882 - MGP_BALBcJ_P0054726 Neb protein_coding protein_coding MGP_BALBcJ_T0054727.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49563709 49760942 - MGP_BALBcJ_P0054727 Neb protein_coding unknown_likely_coding MGP_BALBcJ_T0054728.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49563711 49652248 - MGP_BALBcJ_P0054728 Neb protein_coding protein_coding MGP_BALBcJ_T0054729.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49563711 49765218 - MGP_BALBcJ_P0054729 Neb protein_coding protein_coding MGP_BALBcJ_T0054730.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49564166 49584962 - Neb protein_coding processed_transcript MGP_BALBcJ_T0054731.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49564310 49605347 - MGP_BALBcJ_P0054731 Neb protein_coding protein_coding MGP_BALBcJ_T0054732.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49583390 49589991 - Neb protein_coding processed_transcript MGP_BALBcJ_T0054733.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49602291 49604924 - Neb protein_coding processed_transcript MGP_BALBcJ_T0054734.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49606778 49621031 - MGP_BALBcJ_P0054734 Neb protein_coding protein_coding MGP_BALBcJ_T0054735.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49650292 49684817 - MGP_BALBcJ_P0054735 Neb protein_coding protein_coding MGP_BALBcJ_T0054736.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49749732 49765846 - Neb protein_coding processed_transcript MGP_BALBcJ_T0054737.1 MGP_BALBcJ_G0025704.1 mouse_genomes_project 2 49758925 49768882 - Neb protein_coding processed_transcript MGP_BALBcJ_T0004000.1 MGP_BALBcJ_G0003561.1 mouse_genomes_project 2 71171148 71191166 + Chn1os3 antisense antisense MGP_BALBcJ_T0004001.1 MGP_BALBcJ_G0003561.1 mouse_genomes_project 2 71171446 71173760 + Chn1os3 antisense antisense MGP_BALBcJ_T0052461.1 MGP_BALBcJ_G0025311.1 mouse_genomes_project 2 7102315 7113542 + Kin protein_coding processed_transcript MGP_BALBcJ_T0052462.1 MGP_BALBcJ_G0025311.1 mouse_genomes_project 2 7102346 7114529 + MGP_BALBcJ_P0052462 Kin protein_coding protein_coding MGP_BALBcJ_T0052463.1 MGP_BALBcJ_G0025311.1 mouse_genomes_project 2 7112019 7113902 + Kin protein_coding processed_transcript MGP_BALBcJ_T0053621.1 MGP_BALBcJ_G0025517.1 mouse_genomes_project 2 27005920 27020866 + MGP_BALBcJ_P0053621 Slc27a4 protein_coding protein_coding MGP_BALBcJ_T0053622.1 MGP_BALBcJ_G0025517.1 mouse_genomes_project 2 27010284 27014247 + Slc27a4 protein_coding processed_transcript MGP_BALBcJ_T0007354.1 MGP_BALBcJ_G0006026.1 mouse_genomes_project 2 160028967 160065920 + Gm14243 lincRNA lincRNA MGP_BALBcJ_T0007378.1 MGP_BALBcJ_G0006046.1 mouse_genomes_project 2 166800389 166806845 - 1200007C13Rik lincRNA lincRNA MGP_BALBcJ_T0007383.1 MGP_BALBcJ_G0006051.1 mouse_genomes_project 2 167994888 167995527 + 1700017J07Rik lincRNA lincRNA MGP_BALBcJ_T0007362.1 MGP_BALBcJ_G0006034.1 mouse_genomes_project 2 164517913 164518238 - Gm28163 lincRNA lincRNA MGP_BALBcJ_T0054259.1 MGP_BALBcJ_G0025610.1 mouse_genomes_project 2 31017832 31177140 - MGP_BALBcJ_P0054259 Mvb12b protein_coding protein_coding MGP_BALBcJ_T0054260.1 MGP_BALBcJ_G0025610.1 mouse_genomes_project 2 31074142 31077591 - Mvb12b protein_coding retained_intron MGP_BALBcJ_T0054261.1 MGP_BALBcJ_G0025610.1 mouse_genomes_project 2 31075999 31175635 - Mvb12b protein_coding processed_transcript MGP_BALBcJ_T0054262.1 MGP_BALBcJ_G0025610.1 mouse_genomes_project 2 31113879 31175635 - MGP_BALBcJ_P0054262 Mvb12b protein_coding protein_coding MGP_BALBcJ_T0054263.1 MGP_BALBcJ_G0025610.1 mouse_genomes_project 2 31162416 31176676 - Mvb12b protein_coding processed_transcript MGP_BALBcJ_T0099668.1 MGP_BALBcJ_G0037704.1 mouse_genomes_project 2 29866579 29866684 - Gm23369 snRNA snRNA MGP_BALBcJ_T0055867.1 MGP_BALBcJ_G0026064.1 mouse_genomes_project 2 87083342 87084284 - MGP_BALBcJ_P0055867 Olfr1231 protein_coding protein_coding MGP_BALBcJ_T0054302.1 MGP_BALBcJ_G0025615.1 mouse_genomes_project 2 32076558 32098710 - MGP_BALBcJ_P0054302 Rabepk protein_coding protein_coding MGP_BALBcJ_T0054303.1 MGP_BALBcJ_G0025615.1 mouse_genomes_project 2 32077888 32098560 - MGP_BALBcJ_P0054303 Rabepk protein_coding protein_coding MGP_BALBcJ_T0054304.1 MGP_BALBcJ_G0025615.1 mouse_genomes_project 2 32078099 32094247 - MGP_BALBcJ_P0054304 Rabepk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054305.1 MGP_BALBcJ_G0025615.1 mouse_genomes_project 2 32083326 32098806 - MGP_BALBcJ_P0054305 Rabepk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054306.1 MGP_BALBcJ_G0025615.1 mouse_genomes_project 2 32083718 32098843 - MGP_BALBcJ_P0054306 Rabepk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054307.1 MGP_BALBcJ_G0025615.1 mouse_genomes_project 2 32084190 32098696 - Rabepk protein_coding retained_intron MGP_BALBcJ_T0013638.1 MGP_BALBcJ_G0011735.1 mouse_genomes_project 2 89328389 89328694 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004094.1 MGP_BALBcJ_G0003624.1 mouse_genomes_project 2 142258805 142295865 - Pcsk2os2 antisense antisense MGP_BALBcJ_T0004095.1 MGP_BALBcJ_G0003624.1 mouse_genomes_project 2 142260386 142302638 - Pcsk2os2 antisense antisense MGP_BALBcJ_T0102409.1 MGP_BALBcJ_G0040225.1 mouse_genomes_project 2 84090456 84091343 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0054467.1 MGP_BALBcJ_G0025662.1 mouse_genomes_project 2 34498194 34499124 + MGP_BALBcJ_P0054467 Olfr366 protein_coding protein_coding MGP_BALBcJ_T0017792.1 MGP_BALBcJ_G0015392.1 mouse_genomes_project 2 107827756 107838674 - Platr8 processed_transcript processed_transcript MGP_BALBcJ_T0059478.1 MGP_BALBcJ_G0026912.1 mouse_genomes_project 2 169566645 169574063 + MGP_BALBcJ_P0059478 Pfdn4 protein_coding protein_coding MGP_BALBcJ_T0059479.1 MGP_BALBcJ_G0026912.1 mouse_genomes_project 2 169566646 169574276 + MGP_BALBcJ_P0059479 Pfdn4 protein_coding protein_coding MGP_BALBcJ_T0004112.1 MGP_BALBcJ_G0003639.1 mouse_genomes_project 2 151256244 151257683 - 1700030C14Rik antisense antisense MGP_BALBcJ_T0007175.1 MGP_BALBcJ_G0005880.1 mouse_genomes_project 2 45500606 45903174 - lincRNA lincRNA MGP_BALBcJ_T0057332.1 MGP_BALBcJ_G0026403.1 mouse_genomes_project 2 123543565 123747808 - MGP_BALBcJ_P0057332 Fbn1 protein_coding protein_coding MGP_BALBcJ_T0057333.1 MGP_BALBcJ_G0026403.1 mouse_genomes_project 2 123543598 123749416 - MGP_BALBcJ_P0057333 Fbn1 protein_coding protein_coding MGP_BALBcJ_T0057334.1 MGP_BALBcJ_G0026403.1 mouse_genomes_project 2 123632980 123747495 - Fbn1 protein_coding retained_intron MGP_BALBcJ_T0055740.1 MGP_BALBcJ_G0025953.1 mouse_genomes_project 2 84420406 84421375 + MGP_BALBcJ_P0055740 Olfr1093 protein_coding protein_coding MGP_BALBcJ_T0098573.1 MGP_BALBcJ_G0036627.1 mouse_genomes_project 2 102229191 102229304 + Gm25554 rRNA rRNA MGP_BALBcJ_T0057416.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253572 125290536 + Ap4e1 protein_coding retained_intron MGP_BALBcJ_T0057417.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253576 125258385 + Ap4e1 protein_coding retained_intron MGP_BALBcJ_T0057418.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253579 125298206 + MGP_BALBcJ_P0057418 Ap4e1 protein_coding protein_coding MGP_BALBcJ_T0057419.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253585 125321158 + MGP_BALBcJ_P0057419 Ap4e1 protein_coding protein_coding MGP_BALBcJ_T0057420.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253607 125280640 + MGP_BALBcJ_P0057420 Ap4e1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057421.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253609 125300541 + MGP_BALBcJ_P0057421 Ap4e1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057422.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125253609 125313790 + MGP_BALBcJ_P0057422 Ap4e1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057423.1 MGP_BALBcJ_G0026423.1 mouse_genomes_project 2 125302719 125313619 + MGP_BALBcJ_P0057423 Ap4e1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100997.1 MGP_BALBcJ_G0039033.1 mouse_genomes_project 2 154412207 154412340 - Gm22334 snoRNA snoRNA MGP_BALBcJ_T0017884.1 MGP_BALBcJ_G0015434.1 mouse_genomes_project 2 171510397 171526612 - Gm14455 processed_transcript processed_transcript MGP_BALBcJ_T0102405.1 MGP_BALBcJ_G0040221.1 mouse_genomes_project 2 83476061 83477403 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001059.1 MGP_BALBcJ_G0000987.1 mouse_genomes_project 2 33074803 33077818 - TEC TEC MGP_BALBcJ_T0059311.1 MGP_BALBcJ_G0026878.1 mouse_genomes_project 2 165744654 165746841 + MGP_BALBcJ_P0059311 protein_coding protein_coding MGP_BALBcJ_T0059313.1 MGP_BALBcJ_G0026878.1 mouse_genomes_project 2 165746066 165746803 + protein_coding processed_transcript MGP_BALBcJ_T0013643.1 MGP_BALBcJ_G0011740.1 mouse_genomes_project 2 90383609 90384021 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004156.1 MGP_BALBcJ_G0003674.1 mouse_genomes_project 2 169456421 169458398 + Bcas1os1 antisense antisense MGP_BALBcJ_T0052266.1 MGP_BALBcJ_G0025278.1 mouse_genomes_project 2 279749 304657 - MGP_BALBcJ_P0052266 Olah protein_coding protein_coding MGP_BALBcJ_T0052267.1 MGP_BALBcJ_G0025278.1 mouse_genomes_project 2 279754 340357 - MGP_BALBcJ_P0052267 Olah protein_coding protein_coding MGP_BALBcJ_T0052268.1 MGP_BALBcJ_G0025278.1 mouse_genomes_project 2 279784 304635 - MGP_BALBcJ_P0052268 Olah protein_coding protein_coding MGP_BALBcJ_T0055853.1 MGP_BALBcJ_G0026052.1 mouse_genomes_project 2 86860742 86861678 - MGP_BALBcJ_P0055853 Olfr1218 protein_coding protein_coding MGP_BALBcJ_T0010387.1 MGP_BALBcJ_G0008512.1 mouse_genomes_project 2 29960610 29960747 - Mir8093 miRNA miRNA MGP_BALBcJ_T0057719.1 MGP_BALBcJ_G0026496.1 mouse_genomes_project 2 129504108 129521514 - MGP_BALBcJ_P0057719 Siglec1 protein_coding protein_coding MGP_BALBcJ_T0057720.1 MGP_BALBcJ_G0026496.1 mouse_genomes_project 2 129506917 129521514 - MGP_BALBcJ_P0057720 Siglec1 protein_coding protein_coding MGP_BALBcJ_T0057721.1 MGP_BALBcJ_G0026496.1 mouse_genomes_project 2 129518304 129521514 - MGP_BALBcJ_P0057721 Siglec1 protein_coding protein_coding MGP_BALBcJ_T0010334.1 MGP_BALBcJ_G0008459.1 mouse_genomes_project 2 7511728 7511855 + Gm22091 miRNA miRNA MGP_BALBcJ_T0057654.1 MGP_BALBcJ_G0026485.1 mouse_genomes_project 2 128975050 128976984 - MGP_BALBcJ_P0057654 Avp protein_coding protein_coding MGP_BALBcJ_T0010456.1 MGP_BALBcJ_G0008581.1 mouse_genomes_project 2 157465914 157465972 + Mir3474 miRNA miRNA MGP_BALBcJ_T0017733.1 MGP_BALBcJ_G0015355.1 mouse_genomes_project 2 35949988 35954004 + Gm13587 processed_transcript processed_transcript MGP_BALBcJ_T0010468.1 MGP_BALBcJ_G0008593.1 mouse_genomes_project 2 172827508 172827627 - Mir6340 miRNA miRNA MGP_BALBcJ_T0004174.1 MGP_BALBcJ_G0003686.1 mouse_genomes_project 2 180269075 180281591 + Gm14341 antisense antisense MGP_BALBcJ_T0056904.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117848723 117869597 + MGP_BALBcJ_P0056904 Tyro3 protein_coding protein_coding MGP_BALBcJ_T0056905.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117850219 117856639 + Tyro3 protein_coding processed_transcript MGP_BALBcJ_T0056906.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117850307 117854333 + Tyro3 protein_coding processed_transcript MGP_BALBcJ_T0056907.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117850494 117869597 + MGP_BALBcJ_P0056907 Tyro3 protein_coding protein_coding MGP_BALBcJ_T0056908.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117852093 117854291 + Tyro3 protein_coding processed_transcript MGP_BALBcJ_T0056909.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117854084 117858974 + Tyro3 protein_coding retained_intron MGP_BALBcJ_T0056910.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117860190 117869584 + Tyro3 protein_coding retained_intron MGP_BALBcJ_T0056911.1 MGP_BALBcJ_G0026327.1 mouse_genomes_project 2 117861824 117863370 + Tyro3 protein_coding retained_intron MGP_BALBcJ_T0010399.1 MGP_BALBcJ_G0008524.1 mouse_genomes_project 2 59184567 59184651 - Gm22403 miRNA miRNA MGP_BALBcJ_T0055668.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82563536 82567765 + Tnks1bp1 protein_coding processed_transcript MGP_BALBcJ_T0055669.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82563569 82589098 + Tnks1bp1 protein_coding processed_transcript MGP_BALBcJ_T0055670.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82563585 82579711 + MGP_BALBcJ_P0055670 Tnks1bp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0055671.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82566092 82567683 + Tnks1bp1 protein_coding processed_transcript MGP_BALBcJ_T0055672.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82566092 82589102 + MGP_BALBcJ_P0055672 Tnks1bp1 protein_coding protein_coding MGP_BALBcJ_T0055673.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82566240 82589092 + Tnks1bp1 protein_coding processed_transcript MGP_BALBcJ_T0055674.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82566525 82574190 + Tnks1bp1 protein_coding processed_transcript MGP_BALBcJ_T0055675.1 MGP_BALBcJ_G0025892.1 mouse_genomes_project 2 82573791 82589102 + MGP_BALBcJ_P0055675 Tnks1bp1 protein_coding protein_coding MGP_BALBcJ_T0054831.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 56980815 57217040 + MGP_BALBcJ_P0054831 Tanc1 protein_coding protein_coding MGP_BALBcJ_T0054832.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 56980846 57018213 + Tanc1 protein_coding retained_intron MGP_BALBcJ_T0054833.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 56998827 57015763 + Tanc1 protein_coding retained_intron MGP_BALBcJ_T0054834.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57015568 57216608 + MGP_BALBcJ_P0054834 Tanc1 protein_coding protein_coding MGP_BALBcJ_T0054835.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57064542 57216616 + MGP_BALBcJ_P0054835 Tanc1 protein_coding protein_coding MGP_BALBcJ_T0054836.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57075750 57093652 + Tanc1 protein_coding processed_transcript MGP_BALBcJ_T0054837.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57112471 57190946 + Tanc1 protein_coding retained_intron MGP_BALBcJ_T0054838.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57138910 57141999 + Tanc1 protein_coding processed_transcript MGP_BALBcJ_T0054839.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57149149 57154936 + Tanc1 protein_coding processed_transcript MGP_BALBcJ_T0054840.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57175632 57179069 + Tanc1 protein_coding retained_intron MGP_BALBcJ_T0054841.1 MGP_BALBcJ_G0025727.1 mouse_genomes_project 2 57212630 57216606 + Tanc1 protein_coding retained_intron MGP_BALBcJ_T0007106.1 MGP_BALBcJ_G0005828.1 mouse_genomes_project 2 3236726 3238047 - Gm13383 lincRNA lincRNA MGP_BALBcJ_T0052258.1 MGP_BALBcJ_G0025274.1 mouse_genomes_project 2 55818 164237 + MGP_BALBcJ_P0052258 Fam171a1 protein_coding protein_coding MGP_BALBcJ_T0052259.1 MGP_BALBcJ_G0025274.1 mouse_genomes_project 2 55947 164234 + MGP_BALBcJ_P0052259 Fam171a1 protein_coding protein_coding MGP_BALBcJ_T0010437.1 MGP_BALBcJ_G0008562.1 mouse_genomes_project 2 125145736 125145872 - Mir3473g miRNA miRNA MGP_BALBcJ_T0098754.1 MGP_BALBcJ_G0036808.1 mouse_genomes_project 2 104773036 104773160 + Gm22813 scaRNA scaRNA MGP_BALBcJ_T0057572.1 MGP_BALBcJ_G0026465.1 mouse_genomes_project 2 127720721 127795178 - MGP_BALBcJ_P0057572 F830045P16Rik protein_coding protein_coding MGP_BALBcJ_T0052806.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952015 20049892 - MGP_BALBcJ_P0052806 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052807.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952015 20049846 - MGP_BALBcJ_P0052807 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052808.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952028 20049892 - MGP_BALBcJ_P0052808 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052809.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952250 20049773 - MGP_BALBcJ_P0052809 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052810.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952306 20049838 - MGP_BALBcJ_P0052810 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052811.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952306 20049788 - MGP_BALBcJ_P0052811 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052812.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952306 20049755 - MGP_BALBcJ_P0052812 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052813.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952311 20049881 - MGP_BALBcJ_P0052813 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052814.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952311 20049836 - MGP_BALBcJ_P0052814 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052815.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19952834 20049791 - MGP_BALBcJ_P0052815 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052816.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19953175 20049870 - MGP_BALBcJ_P0052816 Abi1 protein_coding protein_coding MGP_BALBcJ_T0052817.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19953750 19958839 - Abi1 protein_coding retained_intron MGP_BALBcJ_T0052818.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19953754 19961940 - Abi1 protein_coding retained_intron MGP_BALBcJ_T0052819.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19958311 19972490 - Abi1 protein_coding retained_intron MGP_BALBcJ_T0052820.1 MGP_BALBcJ_G0025367.1 mouse_genomes_project 2 19961863 19974249 - Abi1 protein_coding retained_intron MGP_BALBcJ_T0057677.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129115424 129258050 - MGP_BALBcJ_P0057677 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0057678.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129120637 129131942 - MGP_BALBcJ_P0057678 4930402H24Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057679.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129122147 129143070 - MGP_BALBcJ_P0057679 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0057680.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129131851 129143337 - 4930402H24Rik protein_coding processed_transcript MGP_BALBcJ_T0057681.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129147323 129150309 - 4930402H24Rik protein_coding retained_intron MGP_BALBcJ_T0057682.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129149808 129168159 - 4930402H24Rik protein_coding processed_transcript MGP_BALBcJ_T0057683.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129149819 129181507 - MGP_BALBcJ_P0057683 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0057684.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129159200 129258088 - 4930402H24Rik protein_coding retained_intron MGP_BALBcJ_T0057685.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129188033 129189109 - 4930402H24Rik protein_coding processed_transcript MGP_BALBcJ_T0057686.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129188228 129228868 - 4930402H24Rik protein_coding processed_transcript MGP_BALBcJ_T0057687.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129193883 129258067 - 4930402H24Rik protein_coding retained_intron MGP_BALBcJ_T0057688.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129210500 129232268 - 4930402H24Rik protein_coding processed_transcript MGP_BALBcJ_T0057689.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129223581 129258101 - MGP_BALBcJ_P0057689 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0057690.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129228835 129258093 - MGP_BALBcJ_P0057690 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0057691.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129228870 129258090 - MGP_BALBcJ_P0057691 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0057692.1 MGP_BALBcJ_G0026492.1 mouse_genomes_project 2 129230835 129324311 - MGP_BALBcJ_P0057692 4930402H24Rik protein_coding protein_coding MGP_BALBcJ_T0007158.1 MGP_BALBcJ_G0005867.1 mouse_genomes_project 2 31309792 31397507 - C230014O12Rik lincRNA lincRNA MGP_BALBcJ_T0007160.1 MGP_BALBcJ_G0005867.1 mouse_genomes_project 2 31389821 31397513 - C230014O12Rik lincRNA lincRNA MGP_BALBcJ_T0013575.1 MGP_BALBcJ_G0011672.1 mouse_genomes_project 2 70187380 70188537 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059135.1 MGP_BALBcJ_G0026846.1 mouse_genomes_project 2 163642350 163665020 + MGP_BALBcJ_P0059135 Dnttip1 protein_coding protein_coding MGP_BALBcJ_T0059136.1 MGP_BALBcJ_G0026846.1 mouse_genomes_project 2 163642381 163647762 + MGP_BALBcJ_P0059136 Dnttip1 protein_coding protein_coding MGP_BALBcJ_T0059137.1 MGP_BALBcJ_G0026846.1 mouse_genomes_project 2 163642398 163657926 + MGP_BALBcJ_P0059137 Dnttip1 protein_coding protein_coding MGP_BALBcJ_T0059138.1 MGP_BALBcJ_G0026846.1 mouse_genomes_project 2 163650512 163655925 + Dnttip1 protein_coding retained_intron MGP_BALBcJ_T0055352.1 MGP_BALBcJ_G0025822.1 mouse_genomes_project 2 72272541 72274729 + MGP_BALBcJ_P0055352 Hoxd8 protein_coding protein_coding MGP_BALBcJ_T0055353.1 MGP_BALBcJ_G0025822.1 mouse_genomes_project 2 72272831 72275850 + MGP_BALBcJ_P0055353 Hoxd8 protein_coding protein_coding MGP_BALBcJ_T0055354.1 MGP_BALBcJ_G0025822.1 mouse_genomes_project 2 72273077 72275224 + MGP_BALBcJ_P0055354 Hoxd8 protein_coding protein_coding MGP_BALBcJ_T0053829.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28030813 28039679 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053830.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031345 28037751 - MGP_BALBcJ_P0053830 1700001O22Rik protein_coding protein_coding MGP_BALBcJ_T0053831.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031512 28032709 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053832.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031607 28039705 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053833.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031610 28039688 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053834.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031617 28037045 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053835.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031624 28039701 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053836.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031648 28039687 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053837.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031701 28039688 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053838.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28031718 28032920 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053839.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28032152 28039688 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053840.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28032226 28039688 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0053841.1 MGP_BALBcJ_G0025546.1 mouse_genomes_project 2 28033297 28039667 - 1700001O22Rik protein_coding processed_transcript MGP_BALBcJ_T0058105.1 MGP_BALBcJ_G0026585.1 mouse_genomes_project 2 147228141 147231568 + MGP_BALBcJ_P0058105 Nxt1 protein_coding protein_coding MGP_BALBcJ_T0058106.1 MGP_BALBcJ_G0026585.1 mouse_genomes_project 2 147228166 147231568 + MGP_BALBcJ_P0058106 Nxt1 protein_coding protein_coding MGP_BALBcJ_T0007104.1 MGP_BALBcJ_G0005827.1 mouse_genomes_project 2 3111890 3119328 + Gm10857 lincRNA lincRNA MGP_BALBcJ_T0007105.1 MGP_BALBcJ_G0005827.1 mouse_genomes_project 2 3111904 3119273 + Gm10857 lincRNA lincRNA MGP_BALBcJ_T0007341.1 MGP_BALBcJ_G0006015.1 mouse_genomes_project 2 153865426 153867716 - 2310005A03Rik lincRNA lincRNA MGP_BALBcJ_T0102378.1 MGP_BALBcJ_G0040194.1 mouse_genomes_project 2 6033522 6036668 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0059412.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167197564 167218422 - MGP_BALBcJ_P0059412 protein_coding protein_coding MGP_BALBcJ_T0059413.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167198797 167206208 - protein_coding retained_intron MGP_BALBcJ_T0059414.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167198797 167218634 - MGP_BALBcJ_P0059414 protein_coding protein_coding MGP_BALBcJ_T0059415.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167198798 167204473 - protein_coding retained_intron MGP_BALBcJ_T0059416.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167199032 167201778 - protein_coding retained_intron MGP_BALBcJ_T0059417.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167199058 167218371 - MGP_BALBcJ_P0059417 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059418.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167199104 167211342 - protein_coding retained_intron MGP_BALBcJ_T0059419.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167199900 167218119 - protein_coding processed_transcript MGP_BALBcJ_T0059420.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167206120 167218273 - protein_coding retained_intron MGP_BALBcJ_T0059421.1 MGP_BALBcJ_G0026900.1 mouse_genomes_project 2 167207981 167218405 - protein_coding retained_intron MGP_BALBcJ_T0013838.1 MGP_BALBcJ_G0011935.1 mouse_genomes_project 2 163391168 163391893 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057932.1 MGP_BALBcJ_G0026544.1 mouse_genomes_project 2 138649955 138651436 + MGP_BALBcJ_P0057932 Gm17374 protein_coding protein_coding MGP_BALBcJ_T0057548.1 MGP_BALBcJ_G0026458.1 mouse_genomes_project 2 127332480 127367369 + MGP_BALBcJ_P0057548 Ttl protein_coding protein_coding MGP_BALBcJ_T0057549.1 MGP_BALBcJ_G0026458.1 mouse_genomes_project 2 127332523 127334644 + Ttl protein_coding processed_transcript MGP_BALBcJ_T0057550.1 MGP_BALBcJ_G0026458.1 mouse_genomes_project 2 127342600 127360824 + MGP_BALBcJ_P0057550 Ttl protein_coding protein_coding MGP_BALBcJ_T0010378.1 MGP_BALBcJ_G0008503.1 mouse_genomes_project 2 27580840 27580936 + miRNA miRNA MGP_BALBcJ_T0053073.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22468410 22474303 + MGP_BALBcJ_P0053073 Sapcd2 protein_coding protein_coding MGP_BALBcJ_T0053074.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22468419 22472893 + MGP_BALBcJ_P0053074 Sapcd2 protein_coding protein_coding MGP_BALBcJ_T0053075.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22468423 22472893 + MGP_BALBcJ_P0053075 Sapcd2 protein_coding protein_coding MGP_BALBcJ_T0053076.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22468449 22471232 + Sapcd2 protein_coding processed_transcript MGP_BALBcJ_T0053077.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22471110 22472362 + Sapcd2 protein_coding processed_transcript MGP_BALBcJ_T0053078.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22471863 22472867 + Sapcd2 protein_coding processed_transcript MGP_BALBcJ_T0053079.1 MGP_BALBcJ_G0025415.1 mouse_genomes_project 2 22472049 22472890 + Sapcd2 protein_coding processed_transcript MGP_BALBcJ_T0057088.1 MGP_BALBcJ_G0026353.1 mouse_genomes_project 2 119090742 119130161 - MGP_BALBcJ_P0057088 Tgm5 protein_coding protein_coding MGP_BALBcJ_T0057089.1 MGP_BALBcJ_G0026353.1 mouse_genomes_project 2 119118631 119130142 - Tgm5 protein_coding retained_intron MGP_BALBcJ_T0004093.1 MGP_BALBcJ_G0003623.1 mouse_genomes_project 2 142051658 142064062 - Pcsk2os1 antisense antisense MGP_BALBcJ_T0013803.1 MGP_BALBcJ_G0011900.1 mouse_genomes_project 2 152032881 152033163 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053201.1 MGP_BALBcJ_G0025439.1 mouse_genomes_project 2 22810346 22813700 + MGP_BALBcJ_P0053201 Obp2a protein_coding protein_coding MGP_BALBcJ_T0007123.1 MGP_BALBcJ_G0005842.1 mouse_genomes_project 2 14247260 14251005 - Gm13322 lincRNA lincRNA MGP_BALBcJ_T0102447.1 MGP_BALBcJ_G0040263.1 mouse_genomes_project 2 155665044 155692527 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004140.1 MGP_BALBcJ_G0003662.1 mouse_genomes_project 2 163002403 163007120 + Gm11455 antisense antisense MGP_BALBcJ_T0102445.1 MGP_BALBcJ_G0040261.1 mouse_genomes_project 2 152325796 152377944 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0017858.1 MGP_BALBcJ_G0015423.1 mouse_genomes_project 2 156938023 156938775 + Gm20412 processed_transcript processed_transcript MGP_BALBcJ_T0013474.1 MGP_BALBcJ_G0011571.1 mouse_genomes_project 2 34367445 34375879 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052613.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11145117 11214642 + MGP_BALBcJ_P0052613 Stam protein_coding protein_coding MGP_BALBcJ_T0052614.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11145127 11193625 + Stam protein_coding processed_transcript MGP_BALBcJ_T0052615.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11145208 11209373 + MGP_BALBcJ_P0052615 Stam protein_coding protein_coding MGP_BALBcJ_T0052616.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11145241 11212548 + MGP_BALBcJ_P0052616 Stam protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052617.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11145446 11194085 + MGP_BALBcJ_P0052617 Stam protein_coding protein_coding MGP_BALBcJ_T0052618.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11193348 11194180 + Stam protein_coding retained_intron MGP_BALBcJ_T0052619.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11194058 11196402 + Stam protein_coding processed_transcript MGP_BALBcJ_T0052620.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11195855 11204190 + Stam protein_coding retained_intron MGP_BALBcJ_T0052621.1 MGP_BALBcJ_G0025333.1 mouse_genomes_project 2 11199133 11204132 + Stam protein_coding retained_intron MGP_BALBcJ_T0059039.1 MGP_BALBcJ_G0026804.1 mouse_genomes_project 2 162607596 162631246 - MGP_BALBcJ_P0059039 Ada protein_coding protein_coding MGP_BALBcJ_T0059040.1 MGP_BALBcJ_G0026804.1 mouse_genomes_project 2 162611025 162611877 - Ada protein_coding processed_transcript MGP_BALBcJ_T0010471.1 MGP_BALBcJ_G0008596.1 mouse_genomes_project 2 173393104 173393186 - Mir298 miRNA miRNA MGP_BALBcJ_T0055257.1 MGP_BALBcJ_G0025801.1 mouse_genomes_project 2 69829590 69990505 + MGP_BALBcJ_P0055257 Zak protein_coding protein_coding MGP_BALBcJ_T0055258.1 MGP_BALBcJ_G0025801.1 mouse_genomes_project 2 69829681 69955423 + MGP_BALBcJ_P0055258 Zak protein_coding protein_coding MGP_BALBcJ_T0055259.1 MGP_BALBcJ_G0025801.1 mouse_genomes_project 2 69829717 69947163 + Zak protein_coding retained_intron MGP_BALBcJ_T0055260.1 MGP_BALBcJ_G0025801.1 mouse_genomes_project 2 69829730 69937782 + Zak protein_coding retained_intron MGP_BALBcJ_T0055261.1 MGP_BALBcJ_G0025801.1 mouse_genomes_project 2 69829747 69912860 + Zak protein_coding retained_intron MGP_BALBcJ_T0055262.1 MGP_BALBcJ_G0025801.1 mouse_genomes_project 2 69846111 69903639 + MGP_BALBcJ_P0055262 Zak protein_coding protein_coding MGP_BALBcJ_T0100998.1 MGP_BALBcJ_G0039034.1 mouse_genomes_project 2 156526229 156526363 - Gm25407 snoRNA snoRNA MGP_BALBcJ_T0054751.1 MGP_BALBcJ_G0025708.1 mouse_genomes_project 2 50305760 50585333 + MGP_BALBcJ_P0054751 Fmnl2 protein_coding protein_coding MGP_BALBcJ_T0054752.1 MGP_BALBcJ_G0025708.1 mouse_genomes_project 2 50305768 50585731 + MGP_BALBcJ_P0054752 Fmnl2 protein_coding protein_coding MGP_BALBcJ_T0054753.1 MGP_BALBcJ_G0025708.1 mouse_genomes_project 2 50305768 50583407 + MGP_BALBcJ_P0054753 Fmnl2 protein_coding protein_coding MGP_BALBcJ_T0054754.1 MGP_BALBcJ_G0025708.1 mouse_genomes_project 2 50565128 50585333 + MGP_BALBcJ_P0054754 Fmnl2 protein_coding protein_coding MGP_BALBcJ_T0054755.1 MGP_BALBcJ_G0025708.1 mouse_genomes_project 2 50571263 50585333 + MGP_BALBcJ_P0054755 Fmnl2 protein_coding protein_coding MGP_BALBcJ_T0054756.1 MGP_BALBcJ_G0025708.1 mouse_genomes_project 2 50577550 50583732 + MGP_BALBcJ_P0054756 Fmnl2 protein_coding protein_coding MGP_BALBcJ_T0053521.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25740233 25756928 - MGP_BALBcJ_P0053521 Gtf3c5 protein_coding protein_coding MGP_BALBcJ_T0053522.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25740233 25756838 - MGP_BALBcJ_P0053522 Gtf3c5 protein_coding protein_coding MGP_BALBcJ_T0053523.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25742677 25745014 - Gtf3c5 protein_coding retained_intron MGP_BALBcJ_T0053524.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25746072 25747748 - Gtf3c5 protein_coding retained_intron MGP_BALBcJ_T0053525.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25752879 25756916 - Gtf3c5 protein_coding retained_intron MGP_BALBcJ_T0053526.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25753412 25756637 - MGP_BALBcJ_P0053526 Gtf3c5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053527.1 MGP_BALBcJ_G0025500.1 mouse_genomes_project 2 25756653 25757400 - Gtf3c5 protein_coding processed_transcript MGP_BALBcJ_T0057555.1 MGP_BALBcJ_G0026460.1 mouse_genomes_project 2 127400547 127404973 + MGP_BALBcJ_P0057555 Chchd5 protein_coding protein_coding MGP_BALBcJ_T0057556.1 MGP_BALBcJ_G0026460.1 mouse_genomes_project 2 127400651 127404852 + Chchd5 protein_coding processed_transcript MGP_BALBcJ_T0057557.1 MGP_BALBcJ_G0026460.1 mouse_genomes_project 2 127400697 127404319 + Chchd5 protein_coding retained_intron MGP_BALBcJ_T0059526.1 MGP_BALBcJ_G0026930.1 mouse_genomes_project 2 172263120 172269413 + MGP_BALBcJ_P0059526 Pck1 protein_coding protein_coding MGP_BALBcJ_T0059527.1 MGP_BALBcJ_G0026930.1 mouse_genomes_project 2 172263145 172264882 + Pck1 protein_coding processed_transcript MGP_BALBcJ_T0059528.1 MGP_BALBcJ_G0026930.1 mouse_genomes_project 2 172263145 172264532 + Pck1 protein_coding retained_intron MGP_BALBcJ_T0059529.1 MGP_BALBcJ_G0026930.1 mouse_genomes_project 2 172263154 172269411 + Pck1 protein_coding retained_intron MGP_BALBcJ_T0055732.1 MGP_BALBcJ_G0025946.1 mouse_genomes_project 2 84112336 84113278 + MGP_BALBcJ_P0055732 Olfr1076 protein_coding protein_coding MGP_BALBcJ_T0055798.1 MGP_BALBcJ_G0026001.1 mouse_genomes_project 2 85534416 85535394 + MGP_BALBcJ_P0055798 Olfr1145 protein_coding protein_coding MGP_BALBcJ_T0010393.1 MGP_BALBcJ_G0008518.1 mouse_genomes_project 2 36152373 36152449 + Mir181a-2 miRNA miRNA MGP_BALBcJ_T0057247.1 MGP_BALBcJ_G0026382.1 mouse_genomes_project 2 120294040 120312686 + MGP_BALBcJ_P0057247 Terb2 protein_coding protein_coding MGP_BALBcJ_T0057248.1 MGP_BALBcJ_G0026382.1 mouse_genomes_project 2 120294242 120311250 + Terb2 protein_coding processed_transcript MGP_BALBcJ_T0013483.1 MGP_BALBcJ_G0011580.1 mouse_genomes_project 2 36548944 36549307 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054897.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58159406 58373520 - MGP_BALBcJ_P0054897 Rbms1 protein_coding protein_coding MGP_BALBcJ_T0054898.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58161150 58291869 - MGP_BALBcJ_P0054898 Rbms1 protein_coding protein_coding MGP_BALBcJ_T0054899.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58161919 58291901 - MGP_BALBcJ_P0054899 Rbms1 protein_coding protein_coding MGP_BALBcJ_T0054900.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58162757 58171997 - Rbms1 protein_coding processed_transcript MGP_BALBcJ_T0054901.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58165109 58190756 - Rbms1 protein_coding processed_transcript MGP_BALBcJ_T0054902.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58252573 58298500 - Rbms1 protein_coding processed_transcript MGP_BALBcJ_T0054903.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58252573 58299475 - Rbms1 protein_coding processed_transcript MGP_BALBcJ_T0054904.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58298656 58298953 - Rbms1 protein_coding processed_transcript MGP_BALBcJ_T0054905.1 MGP_BALBcJ_G0025735.1 mouse_genomes_project 2 58298868 58299441 - Rbms1 protein_coding processed_transcript MGP_BALBcJ_T0059422.1 MGP_BALBcJ_G0026901.1 mouse_genomes_project 2 167218664 167220640 + MGP_BALBcJ_P0059422 Mocs3 protein_coding protein_coding MGP_BALBcJ_T0052985.1 MGP_BALBcJ_G0025397.1 mouse_genomes_project 2 22299792 22301237 - Stpg3 protein_coding processed_transcript MGP_BALBcJ_T0052986.1 MGP_BALBcJ_G0025397.1 mouse_genomes_project 2 22299793 22302217 - Stpg3 protein_coding processed_transcript MGP_BALBcJ_T0052987.1 MGP_BALBcJ_G0025397.1 mouse_genomes_project 2 22300144 22302216 - MGP_BALBcJ_P0052987 Stpg3 protein_coding protein_coding MGP_BALBcJ_T0052988.1 MGP_BALBcJ_G0025397.1 mouse_genomes_project 2 22300347 22302223 - MGP_BALBcJ_P0052988 Stpg3 protein_coding protein_coding MGP_BALBcJ_T0052989.1 MGP_BALBcJ_G0025397.1 mouse_genomes_project 2 22300503 22302177 - Stpg3 protein_coding processed_transcript MGP_BALBcJ_T0007275.1 MGP_BALBcJ_G0005964.1 mouse_genomes_project 2 113350232 113352813 + Gm13976 lincRNA lincRNA MGP_BALBcJ_T0054458.1 MGP_BALBcJ_G0025654.1 mouse_genomes_project 2 34201836 34202790 + MGP_BALBcJ_P0054458 Olfr354 protein_coding protein_coding MGP_BALBcJ_T0100971.1 MGP_BALBcJ_G0039007.1 mouse_genomes_project 2 109830017 109830148 + Gm26421 snoRNA snoRNA MGP_BALBcJ_T0052396.1 MGP_BALBcJ_G0025300.1 mouse_genomes_project 2 2867238 2914002 - MGP_BALBcJ_P0052396 Dhtkd1 protein_coding protein_coding MGP_BALBcJ_T0052397.1 MGP_BALBcJ_G0025300.1 mouse_genomes_project 2 2868301 2913953 - MGP_BALBcJ_P0052397 Dhtkd1 protein_coding protein_coding MGP_BALBcJ_T0052398.1 MGP_BALBcJ_G0025300.1 mouse_genomes_project 2 2874751 2882975 - Dhtkd1 protein_coding processed_transcript MGP_BALBcJ_T0013514.1 MGP_BALBcJ_G0011611.1 mouse_genomes_project 2 48967461 48968557 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058054.1 MGP_BALBcJ_G0026572.1 mouse_genomes_project 2 144441899 144459239 - MGP_BALBcJ_P0058054 Crnkl1 protein_coding protein_coding MGP_BALBcJ_T0058055.1 MGP_BALBcJ_G0026572.1 mouse_genomes_project 2 144454581 144455580 - Crnkl1 protein_coding retained_intron MGP_BALBcJ_T0058056.1 MGP_BALBcJ_G0026572.1 mouse_genomes_project 2 144456160 144458939 - Crnkl1 protein_coding retained_intron MGP_BALBcJ_T0007217.1 MGP_BALBcJ_G0005915.1 mouse_genomes_project 2 72323001 72323644 + Gm14426 lincRNA lincRNA MGP_BALBcJ_T0053489.1 MGP_BALBcJ_G0025492.1 mouse_genomes_project 2 25361268 25384171 + Olfm1 protein_coding processed_transcript MGP_BALBcJ_T0053490.1 MGP_BALBcJ_G0025492.1 mouse_genomes_project 2 25361268 25399873 + MGP_BALBcJ_P0053490 Olfm1 protein_coding protein_coding MGP_BALBcJ_T0053491.1 MGP_BALBcJ_G0025492.1 mouse_genomes_project 2 25361369 25400147 + MGP_BALBcJ_P0053491 Olfm1 protein_coding protein_coding MGP_BALBcJ_T0053492.1 MGP_BALBcJ_G0025492.1 mouse_genomes_project 2 25373815 25384171 + MGP_BALBcJ_P0053492 Olfm1 protein_coding protein_coding MGP_BALBcJ_T0053493.1 MGP_BALBcJ_G0025492.1 mouse_genomes_project 2 25373815 25400147 + MGP_BALBcJ_P0053493 Olfm1 protein_coding protein_coding MGP_BALBcJ_T0059481.1 MGP_BALBcJ_G0026914.1 mouse_genomes_project 2 169790457 169941946 + MGP_BALBcJ_P0059481 Dok5 protein_coding protein_coding MGP_BALBcJ_T0013859.1 MGP_BALBcJ_G0011956.1 mouse_genomes_project 2 173732420 173732993 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007345.1 MGP_BALBcJ_G0006019.1 mouse_genomes_project 2 155387350 155388353 - Gm14174 lincRNA lincRNA MGP_BALBcJ_T0013511.1 MGP_BALBcJ_G0011608.1 mouse_genomes_project 2 48104666 48105078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053430.1 MGP_BALBcJ_G0025480.1 mouse_genomes_project 2 24165495 24172055 - Slc2a6 protein_coding processed_transcript MGP_BALBcJ_T0053431.1 MGP_BALBcJ_G0025480.1 mouse_genomes_project 2 24165495 24172079 - Slc2a6 protein_coding processed_transcript MGP_BALBcJ_T0053432.1 MGP_BALBcJ_G0025480.1 mouse_genomes_project 2 24165495 24172042 - MGP_BALBcJ_P0053432 Slc2a6 protein_coding protein_coding MGP_BALBcJ_T0053433.1 MGP_BALBcJ_G0025480.1 mouse_genomes_project 2 24165495 24172131 - MGP_BALBcJ_P0053433 Slc2a6 protein_coding protein_coding MGP_BALBcJ_T0053434.1 MGP_BALBcJ_G0025480.1 mouse_genomes_project 2 24168200 24170124 - Slc2a6 protein_coding processed_transcript MGP_BALBcJ_T0053435.1 MGP_BALBcJ_G0025480.1 mouse_genomes_project 2 24170220 24172124 - MGP_BALBcJ_P0053435 Slc2a6 protein_coding protein_coding MGP_BALBcJ_T0058493.1 MGP_BALBcJ_G0026703.1 mouse_genomes_project 2 153817338 153832599 - MGP_BALBcJ_P0058493 protein_coding protein_coding MGP_BALBcJ_T0058494.1 MGP_BALBcJ_G0026703.1 mouse_genomes_project 2 153823895 153832549 - MGP_BALBcJ_P0058494 protein_coding protein_coding MGP_BALBcJ_T0058495.1 MGP_BALBcJ_G0026703.1 mouse_genomes_project 2 153826689 153832549 - protein_coding retained_intron MGP_BALBcJ_T0007110.1 MGP_BALBcJ_G0005831.1 mouse_genomes_project 2 4505413 4506772 + Gm28641 lincRNA lincRNA MGP_BALBcJ_T0055350.1 MGP_BALBcJ_G0025820.1 mouse_genomes_project 2 72259892 72263046 + MGP_BALBcJ_P0055350 Hoxd10 protein_coding protein_coding MGP_BALBcJ_T0001058.1 MGP_BALBcJ_G0000986.1 mouse_genomes_project 2 32741736 32742727 - TEC TEC MGP_BALBcJ_T0013528.1 MGP_BALBcJ_G0011625.1 mouse_genomes_project 2 53415399 53418026 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058102.1 MGP_BALBcJ_G0026582.1 mouse_genomes_project 2 146946424 146947848 + MGP_BALBcJ_P0058102 Sstr4 protein_coding protein_coding MGP_BALBcJ_T0055714.1 MGP_BALBcJ_G0025928.1 mouse_genomes_project 2 83737152 83738180 - MGP_BALBcJ_P0055714 Olfr1042 protein_coding protein_coding MGP_BALBcJ_T0010423.1 MGP_BALBcJ_G0008548.1 mouse_genomes_project 2 92379249 92379330 - Gm44461 miRNA miRNA MGP_BALBcJ_T0001041.1 MGP_BALBcJ_G0000969.1 mouse_genomes_project 2 11685718 11688339 + TEC TEC MGP_BALBcJ_T0059256.1 MGP_BALBcJ_G0026869.1 mouse_genomes_project 2 164308883 164315740 - MGP_BALBcJ_P0059256 Ocstamp protein_coding protein_coding MGP_BALBcJ_T0013470.1 MGP_BALBcJ_G0011567.1 mouse_genomes_project 2 33450827 33451192 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004131.1 MGP_BALBcJ_G0003657.1 mouse_genomes_project 2 162292623 162293190 + 2900093K20Rik antisense antisense MGP_BALBcJ_T0058172.1 MGP_BALBcJ_G0026610.1 mouse_genomes_project 2 149539059 149563916 + Gins1 protein_coding processed_transcript MGP_BALBcJ_T0058173.1 MGP_BALBcJ_G0026610.1 mouse_genomes_project 2 149544327 149569293 + MGP_BALBcJ_P0058173 Gins1 protein_coding protein_coding MGP_BALBcJ_T0058174.1 MGP_BALBcJ_G0026610.1 mouse_genomes_project 2 149544350 149564110 + Gins1 protein_coding processed_transcript MGP_BALBcJ_T0058175.1 MGP_BALBcJ_G0026610.1 mouse_genomes_project 2 149547699 149565558 + Gins1 protein_coding processed_transcript MGP_BALBcJ_T0058574.1 MGP_BALBcJ_G0026718.1 mouse_genomes_project 2 154531925 154573000 + MGP_BALBcJ_P0058574 Mmp24 protein_coding protein_coding MGP_BALBcJ_T0058575.1 MGP_BALBcJ_G0026718.1 mouse_genomes_project 2 154563998 154567329 + Mmp24 protein_coding retained_intron MGP_BALBcJ_T0001054.1 MGP_BALBcJ_G0000982.1 mouse_genomes_project 2 29760293 29764454 + TEC TEC MGP_BALBcJ_T0010435.1 MGP_BALBcJ_G0008560.1 mouse_genomes_project 2 119498936 119499037 - Gm22953 miRNA miRNA MGP_BALBcJ_T0010365.1 MGP_BALBcJ_G0008490.1 mouse_genomes_project 2 22140318 22140385 - Gm24328 miRNA miRNA MGP_BALBcJ_T0059205.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163907572 163942247 - MGP_BALBcJ_P0059205 Ncoa5 protein_coding protein_coding MGP_BALBcJ_T0059206.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163907575 163942197 - MGP_BALBcJ_P0059206 Ncoa5 protein_coding protein_coding MGP_BALBcJ_T0059207.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163907578 163942168 - MGP_BALBcJ_P0059207 Ncoa5 protein_coding protein_coding MGP_BALBcJ_T0059208.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163909889 163911872 - Ncoa5 protein_coding retained_intron MGP_BALBcJ_T0059209.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163917330 163942183 - Ncoa5 protein_coding retained_intron MGP_BALBcJ_T0059210.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163920417 163942209 - MGP_BALBcJ_P0059210 Ncoa5 protein_coding protein_coding MGP_BALBcJ_T0059211.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163930085 163930627 - Ncoa5 protein_coding processed_transcript MGP_BALBcJ_T0059212.1 MGP_BALBcJ_G0026861.1 mouse_genomes_project 2 163930355 163942167 - Ncoa5 protein_coding retained_intron MGP_BALBcJ_T0007237.1 MGP_BALBcJ_G0005933.1 mouse_genomes_project 2 89868607 89872988 - 2900072N19Rik lincRNA lincRNA MGP_BALBcJ_T0056642.1 MGP_BALBcJ_G0026259.1 mouse_genomes_project 2 110259831 110271150 - MGP_BALBcJ_P0056642 Nutm1 protein_coding protein_coding MGP_BALBcJ_T0056784.1 MGP_BALBcJ_G0026296.1 mouse_genomes_project 2 116808006 116813313 + MGP_BALBcJ_P0056784 Phgr1 protein_coding protein_coding MGP_BALBcJ_T0056785.1 MGP_BALBcJ_G0026296.1 mouse_genomes_project 2 116808006 116813314 + MGP_BALBcJ_P0056785 Phgr1 protein_coding protein_coding MGP_BALBcJ_T0056810.1 MGP_BALBcJ_G0026301.1 mouse_genomes_project 2 116960282 116962372 + MGP_BALBcJ_P0056810 Chst14 protein_coding protein_coding MGP_BALBcJ_T0056811.1 MGP_BALBcJ_G0026301.1 mouse_genomes_project 2 116960300 116962366 + MGP_BALBcJ_P0056811 Chst14 protein_coding protein_coding MGP_BALBcJ_T0059085.1 MGP_BALBcJ_G0026825.1 mouse_genomes_project 2 163291930 163303576 + Rbpjl protein_coding retained_intron MGP_BALBcJ_T0059086.1 MGP_BALBcJ_G0026825.1 mouse_genomes_project 2 163291983 163304240 + MGP_BALBcJ_P0059086 Rbpjl protein_coding protein_coding MGP_BALBcJ_T0059087.1 MGP_BALBcJ_G0026825.1 mouse_genomes_project 2 163291998 163300173 + Rbpjl protein_coding processed_transcript MGP_BALBcJ_T0056121.1 MGP_BALBcJ_G0026126.1 mouse_genomes_project 2 89514630 89516114 + MGP_BALBcJ_P0056121 Harbi1 protein_coding protein_coding MGP_BALBcJ_T0056122.1 MGP_BALBcJ_G0026126.1 mouse_genomes_project 2 89514631 89516512 + MGP_BALBcJ_P0056122 Harbi1 protein_coding protein_coding MGP_BALBcJ_T0056123.1 MGP_BALBcJ_G0026126.1 mouse_genomes_project 2 89514695 89519226 + MGP_BALBcJ_P0056123 Harbi1 protein_coding protein_coding MGP_BALBcJ_T0056124.1 MGP_BALBcJ_G0026126.1 mouse_genomes_project 2 89514700 89525375 + MGP_BALBcJ_P0056124 Harbi1 protein_coding protein_coding MGP_BALBcJ_T0056125.1 MGP_BALBcJ_G0026126.1 mouse_genomes_project 2 89515981 89523117 + MGP_BALBcJ_P0056125 Harbi1 protein_coding protein_coding MGP_BALBcJ_T0099667.1 MGP_BALBcJ_G0037703.1 mouse_genomes_project 2 27136882 27136979 - Gm23865 snRNA snRNA MGP_BALBcJ_T0058365.1 MGP_BALBcJ_G0026668.1 mouse_genomes_project 2 151962606 152023040 + MGP_BALBcJ_P0058365 Asxl1 protein_coding protein_coding MGP_BALBcJ_T0058366.1 MGP_BALBcJ_G0026668.1 mouse_genomes_project 2 151963095 152023047 + MGP_BALBcJ_P0058366 Asxl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0058367.1 MGP_BALBcJ_G0026668.1 mouse_genomes_project 2 151964436 151974442 + Asxl1 protein_coding processed_transcript MGP_BALBcJ_T0058368.1 MGP_BALBcJ_G0026668.1 mouse_genomes_project 2 151964564 152010627 + Asxl1 protein_coding processed_transcript MGP_BALBcJ_T0058369.1 MGP_BALBcJ_G0026668.1 mouse_genomes_project 2 152011892 152015870 + Asxl1 protein_coding retained_intron MGP_BALBcJ_T0055715.1 MGP_BALBcJ_G0025929.1 mouse_genomes_project 2 83739944 83740889 - MGP_BALBcJ_P0055715 Olfr1043 protein_coding protein_coding MGP_BALBcJ_T0058072.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144751778 145024731 - MGP_BALBcJ_P0058072 Ralgapa2 protein_coding protein_coding MGP_BALBcJ_T0058073.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144755862 144958928 - MGP_BALBcJ_P0058073 Ralgapa2 protein_coding protein_coding MGP_BALBcJ_T0058074.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144756678 144773117 - Ralgapa2 protein_coding processed_transcript MGP_BALBcJ_T0058075.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144760084 145024626 - MGP_BALBcJ_P0058075 Ralgapa2 protein_coding protein_coding MGP_BALBcJ_T0058076.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144770351 144901363 - MGP_BALBcJ_P0058076 Ralgapa2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058077.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144825183 145024626 - MGP_BALBcJ_P0058077 Ralgapa2 protein_coding unknown_likely_coding MGP_BALBcJ_T0058078.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144873747 144919477 - Ralgapa2 protein_coding retained_intron MGP_BALBcJ_T0058079.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144918030 144926200 - Ralgapa2 protein_coding retained_intron MGP_BALBcJ_T0058080.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144933388 145024638 - Ralgapa2 protein_coding retained_intron MGP_BALBcJ_T0058081.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144942809 145024731 - Ralgapa2 protein_coding retained_intron MGP_BALBcJ_T0058082.1 MGP_BALBcJ_G0026575.1 mouse_genomes_project 2 144997435 145024753 - Ralgapa2 protein_coding retained_intron MGP_BALBcJ_T0056881.1 MGP_BALBcJ_G0026322.1 mouse_genomes_project 2 117704269 117712327 - MGP_BALBcJ_P0056881 Ndufaf1 protein_coding protein_coding MGP_BALBcJ_T0056882.1 MGP_BALBcJ_G0026322.1 mouse_genomes_project 2 117709891 117712305 - Ndufaf1 protein_coding processed_transcript MGP_BALBcJ_T0056883.1 MGP_BALBcJ_G0026322.1 mouse_genomes_project 2 117710071 117712320 - Ndufaf1 protein_coding processed_transcript MGP_BALBcJ_T0007194.1 MGP_BALBcJ_G0005897.1 mouse_genomes_project 2 64616726 64656753 - Gm13598 lincRNA lincRNA MGP_BALBcJ_T0058429.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153027677 153063196 - MGP_BALBcJ_P0058429 Cdk5rap1 protein_coding protein_coding MGP_BALBcJ_T0058430.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153027683 153062917 - MGP_BALBcJ_P0058430 Cdk5rap1 protein_coding protein_coding MGP_BALBcJ_T0058431.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153036183 153062959 - Cdk5rap1 protein_coding processed_transcript MGP_BALBcJ_T0058432.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153045264 153049002 - Cdk5rap1 protein_coding retained_intron MGP_BALBcJ_T0058433.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153050656 153062929 - MGP_BALBcJ_P0058433 Cdk5rap1 protein_coding protein_coding MGP_BALBcJ_T0058434.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153056050 153060995 - Cdk5rap1 protein_coding processed_transcript MGP_BALBcJ_T0058435.1 MGP_BALBcJ_G0026688.1 mouse_genomes_project 2 153060887 153062889 - Cdk5rap1 protein_coding processed_transcript MGP_BALBcJ_T0007234.1 MGP_BALBcJ_G0005930.1 mouse_genomes_project 2 89030389 89031595 + A330069E16Rik lincRNA lincRNA MGP_BALBcJ_T0010389.1 MGP_BALBcJ_G0008514.1 mouse_genomes_project 2 29986601 29986674 - Mir3960 miRNA miRNA MGP_BALBcJ_T0056658.1 MGP_BALBcJ_G0026266.1 mouse_genomes_project 2 110485710 110487309 - MGP_BALBcJ_P0056658 Chrm5 protein_coding protein_coding MGP_BALBcJ_T0052603.1 MGP_BALBcJ_G0025330.1 mouse_genomes_project 2 10653437 10654344 + MGP_BALBcJ_P0052603 Vim protein_coding protein_coding MGP_BALBcJ_T0052604.1 MGP_BALBcJ_G0025330.1 mouse_genomes_project 2 10653462 10662328 + MGP_BALBcJ_P0052604 Vim protein_coding protein_coding MGP_BALBcJ_T0052605.1 MGP_BALBcJ_G0025330.1 mouse_genomes_project 2 10653791 10662327 + MGP_BALBcJ_P0052605 Vim protein_coding protein_coding MGP_BALBcJ_T0052606.1 MGP_BALBcJ_G0025330.1 mouse_genomes_project 2 10653832 10658115 + Vim protein_coding retained_intron MGP_BALBcJ_T0052607.1 MGP_BALBcJ_G0025330.1 mouse_genomes_project 2 10654033 10656959 + Vim protein_coding retained_intron MGP_BALBcJ_T0052608.1 MGP_BALBcJ_G0025330.1 mouse_genomes_project 2 10658881 10661980 + Vim protein_coding retained_intron MGP_BALBcJ_T0013865.1 MGP_BALBcJ_G0011962.1 mouse_genomes_project 2 180616858 180617497 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056300.1 MGP_BALBcJ_G0026156.1 mouse_genomes_project 2 92255210 92279507 - MGP_BALBcJ_P0056300 Api5 protein_coding protein_coding MGP_BALBcJ_T0056301.1 MGP_BALBcJ_G0026156.1 mouse_genomes_project 2 92259768 92279483 - Api5 protein_coding processed_transcript MGP_BALBcJ_T0056302.1 MGP_BALBcJ_G0026156.1 mouse_genomes_project 2 92263844 92279651 - Api5 protein_coding retained_intron MGP_BALBcJ_T0056303.1 MGP_BALBcJ_G0026156.1 mouse_genomes_project 2 92268577 92273501 - Api5 protein_coding processed_transcript MGP_BALBcJ_T0058241.1 MGP_BALBcJ_G0026627.1 mouse_genomes_project 2 150741745 150747282 + MGP_BALBcJ_P0058241 Tcf15 protein_coding protein_coding MGP_BALBcJ_T0098362.1 MGP_BALBcJ_G0036416.1 mouse_genomes_project 2 91791077 91791826 - pseudogene pseudogene MGP_BALBcJ_T0053309.1 MGP_BALBcJ_G0025460.1 mouse_genomes_project 2 23515325 23523109 + MGP_BALBcJ_P0053309 Pmpca protein_coding protein_coding MGP_BALBcJ_T0053310.1 MGP_BALBcJ_G0025460.1 mouse_genomes_project 2 23515334 23519928 + MGP_BALBcJ_P0053310 Pmpca protein_coding protein_coding MGP_BALBcJ_T0053311.1 MGP_BALBcJ_G0025460.1 mouse_genomes_project 2 23515340 23516282 + Pmpca protein_coding processed_transcript MGP_BALBcJ_T0053312.1 MGP_BALBcJ_G0025460.1 mouse_genomes_project 2 23515340 23516189 + Pmpca protein_coding processed_transcript MGP_BALBcJ_T0053313.1 MGP_BALBcJ_G0025460.1 mouse_genomes_project 2 23515342 23517953 + Pmpca protein_coding processed_transcript MGP_BALBcJ_T0053314.1 MGP_BALBcJ_G0025460.1 mouse_genomes_project 2 23516913 23518385 + Pmpca protein_coding processed_transcript MGP_BALBcJ_T0057429.1 MGP_BALBcJ_G0026425.1 mouse_genomes_project 2 125356791 125387589 - MGP_BALBcJ_P0057429 Ncaph protein_coding protein_coding MGP_BALBcJ_T0057430.1 MGP_BALBcJ_G0026425.1 mouse_genomes_project 2 125356809 125368404 - Ncaph protein_coding retained_intron MGP_BALBcJ_T0057431.1 MGP_BALBcJ_G0026425.1 mouse_genomes_project 2 125356932 125387537 - MGP_BALBcJ_P0057431 Ncaph protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057432.1 MGP_BALBcJ_G0026425.1 mouse_genomes_project 2 125361560 125370624 - Ncaph protein_coding retained_intron MGP_BALBcJ_T0057433.1 MGP_BALBcJ_G0026425.1 mouse_genomes_project 2 125374564 125375702 - Ncaph protein_coding retained_intron MGP_BALBcJ_T0057434.1 MGP_BALBcJ_G0026425.1 mouse_genomes_project 2 125381303 125387532 - Ncaph protein_coding processed_transcript MGP_BALBcJ_T0013719.1 MGP_BALBcJ_G0011816.1 mouse_genomes_project 2 119801035 119801714 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055691.1 MGP_BALBcJ_G0025906.1 mouse_genomes_project 2 83227324 83228266 + MGP_BALBcJ_P0055691 Olfr1008 protein_coding protein_coding MGP_BALBcJ_T0010380.1 MGP_BALBcJ_G0008505.1 mouse_genomes_project 2 28860186 28860250 + Mir6998 miRNA miRNA MGP_BALBcJ_T0007397.1 MGP_BALBcJ_G0006063.1 mouse_genomes_project 2 170258975 170333740 + Gm14266 lincRNA lincRNA MGP_BALBcJ_T0007400.1 MGP_BALBcJ_G0006063.1 mouse_genomes_project 2 170317835 170335904 + Gm14266 lincRNA lincRNA MGP_BALBcJ_T0055626.1 MGP_BALBcJ_G0025881.1 mouse_genomes_project 2 82284256 82294234 - MGP_BALBcJ_P0055626 Serping1 protein_coding protein_coding MGP_BALBcJ_T0055627.1 MGP_BALBcJ_G0025881.1 mouse_genomes_project 2 82284375 82294274 - MGP_BALBcJ_P0055627 Serping1 protein_coding protein_coding MGP_BALBcJ_T0055628.1 MGP_BALBcJ_G0025881.1 mouse_genomes_project 2 82292030 82294028 - Serping1 protein_coding processed_transcript MGP_BALBcJ_T0055039.1 MGP_BALBcJ_G0025758.1 mouse_genomes_project 2 64888554 64902789 + MGP_BALBcJ_P0055039 Gm21830 protein_coding protein_coding MGP_BALBcJ_T0055532.1 MGP_BALBcJ_G0025860.1 mouse_genomes_project 2 78210111 78251570 + Gm4353 protein_coding retained_intron MGP_BALBcJ_T0055534.1 MGP_BALBcJ_G0025860.1 mouse_genomes_project 2 78232004 78251566 + MGP_BALBcJ_P0055534 Gm4353 protein_coding protein_coding MGP_BALBcJ_T0055536.1 MGP_BALBcJ_G0025860.1 mouse_genomes_project 2 78232020 78248669 + MGP_BALBcJ_P0055536 Gm4353 protein_coding protein_coding MGP_BALBcJ_T0055537.1 MGP_BALBcJ_G0025860.1 mouse_genomes_project 2 78232456 78239675 + Gm4353 protein_coding processed_transcript MGP_BALBcJ_T0055538.1 MGP_BALBcJ_G0025860.1 mouse_genomes_project 2 78237413 78246083 + Gm4353 protein_coding processed_transcript MGP_BALBcJ_T0053919.1 MGP_BALBcJ_G0025557.1 mouse_genomes_project 2 28491942 28541826 + MGP_BALBcJ_P0053919 Ncs1 protein_coding protein_coding MGP_BALBcJ_T0053920.1 MGP_BALBcJ_G0025557.1 mouse_genomes_project 2 28492285 28538156 + MGP_BALBcJ_P0053920 Ncs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003996.1 MGP_BALBcJ_G0003558.1 mouse_genomes_project 2 70942478 70950859 + Gm13709 antisense antisense MGP_BALBcJ_T0001061.1 MGP_BALBcJ_G0000989.1 mouse_genomes_project 2 33376479 33379651 - TEC TEC MGP_BALBcJ_T0058337.1 MGP_BALBcJ_G0026661.1 mouse_genomes_project 2 151682654 151699038 + Ccm2l protein_coding processed_transcript MGP_BALBcJ_T0058338.1 MGP_BALBcJ_G0026661.1 mouse_genomes_project 2 151682683 151687796 + Ccm2l protein_coding processed_transcript MGP_BALBcJ_T0058339.1 MGP_BALBcJ_G0026661.1 mouse_genomes_project 2 151682697 151687607 + MGP_BALBcJ_P0058339 Ccm2l protein_coding protein_coding MGP_BALBcJ_T0058340.1 MGP_BALBcJ_G0026661.1 mouse_genomes_project 2 151682706 151698502 + MGP_BALBcJ_P0058340 Ccm2l protein_coding protein_coding MGP_BALBcJ_T0013506.1 MGP_BALBcJ_G0011603.1 mouse_genomes_project 2 46771890 46772665 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053192.1 MGP_BALBcJ_G0025436.1 mouse_genomes_project 2 22768160 22771744 + MGP_BALBcJ_P0053192 Lcn5 protein_coding protein_coding MGP_BALBcJ_T0053193.1 MGP_BALBcJ_G0025436.1 mouse_genomes_project 2 22768163 22771888 + MGP_BALBcJ_P0053193 Lcn5 protein_coding protein_coding MGP_BALBcJ_T0053194.1 MGP_BALBcJ_G0025436.1 mouse_genomes_project 2 22768163 22772220 + MGP_BALBcJ_P0053194 Lcn5 protein_coding protein_coding MGP_BALBcJ_T0053195.1 MGP_BALBcJ_G0025436.1 mouse_genomes_project 2 22771130 22771884 + Lcn5 protein_coding processed_transcript MGP_BALBcJ_T0007342.1 MGP_BALBcJ_G0006016.1 mouse_genomes_project 2 155212036 155214633 - Gm14225 lincRNA lincRNA MGP_BALBcJ_T0056408.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101687473 101723027 - MGP_BALBcJ_P0056408 Caprin1 protein_coding protein_coding MGP_BALBcJ_T0056409.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101689550 101722470 - MGP_BALBcJ_P0056409 Caprin1 protein_coding protein_coding MGP_BALBcJ_T0056410.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101691637 101697307 - MGP_BALBcJ_P0056410 Caprin1 protein_coding protein_coding MGP_BALBcJ_T0056411.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101692342 101696323 - MGP_BALBcJ_P0056411 Caprin1 protein_coding protein_coding MGP_BALBcJ_T0056412.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101692980 101697210 - Caprin1 protein_coding retained_intron MGP_BALBcJ_T0056413.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101696240 101698796 - Caprin1 protein_coding retained_intron MGP_BALBcJ_T0056414.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101697274 101698238 - Caprin1 protein_coding processed_transcript MGP_BALBcJ_T0056415.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101697523 101703899 - MGP_BALBcJ_P0056415 Caprin1 protein_coding protein_coding MGP_BALBcJ_T0056416.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101697526 101700538 - Caprin1 protein_coding retained_intron MGP_BALBcJ_T0056417.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101697997 101700184 - Caprin1 protein_coding processed_transcript MGP_BALBcJ_T0056418.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101702493 101722299 - Caprin1 protein_coding processed_transcript MGP_BALBcJ_T0056419.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101704054 101721910 - Caprin1 protein_coding processed_transcript MGP_BALBcJ_T0056420.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101707582 101722339 - Caprin1 protein_coding retained_intron MGP_BALBcJ_T0056421.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101707980 101722234 - Caprin1 protein_coding processed_transcript MGP_BALBcJ_T0056422.1 MGP_BALBcJ_G0026177.1 mouse_genomes_project 2 101721817 101722977 - Caprin1 protein_coding retained_intron MGP_BALBcJ_T0053167.1 MGP_BALBcJ_G0025430.1 mouse_genomes_project 2 22684635 22690948 - MGP_BALBcJ_P0053167 Gm996 protein_coding protein_coding MGP_BALBcJ_T0053168.1 MGP_BALBcJ_G0025430.1 mouse_genomes_project 2 22684649 22690977 - MGP_BALBcJ_P0053168 Gm996 protein_coding protein_coding MGP_BALBcJ_T0053169.1 MGP_BALBcJ_G0025430.1 mouse_genomes_project 2 22686192 22689117 - MGP_BALBcJ_P0053169 Gm996 protein_coding protein_coding MGP_BALBcJ_T0053170.1 MGP_BALBcJ_G0025430.1 mouse_genomes_project 2 22689030 22689483 - MGP_BALBcJ_P0053170 Gm996 protein_coding protein_coding MGP_BALBcJ_T0011502.1 MGP_BALBcJ_G0009627.1 mouse_genomes_project 2 165629011 165629358 + Gm25265 misc_RNA misc_RNA MGP_BALBcJ_T0013446.1 MGP_BALBcJ_G0011543.1 mouse_genomes_project 2 21741461 21742107 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057799.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130481089 130573997 - MGP_BALBcJ_P0057799 Slc23a2 protein_coding protein_coding MGP_BALBcJ_T0057800.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130484007 130485279 - Slc23a2 protein_coding processed_transcript MGP_BALBcJ_T0057801.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130489301 130495634 - Slc23a2 protein_coding processed_transcript MGP_BALBcJ_T0057802.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130503163 130573997 - Slc23a2 protein_coding processed_transcript MGP_BALBcJ_T0057803.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130503935 130506256 - Slc23a2 protein_coding processed_transcript MGP_BALBcJ_T0057804.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130517356 130522874 - Slc23a2 protein_coding processed_transcript MGP_BALBcJ_T0057805.1 MGP_BALBcJ_G0026514.1 mouse_genomes_project 2 130522468 130540560 - MGP_BALBcJ_P0057805 Slc23a2 protein_coding protein_coding MGP_BALBcJ_T0058091.1 MGP_BALBcJ_G0026579.1 mouse_genomes_project 2 145721369 145729798 - MGP_BALBcJ_P0058091 Nkx2-2 protein_coding protein_coding MGP_BALBcJ_T0058092.1 MGP_BALBcJ_G0026579.1 mouse_genomes_project 2 145726870 145730190 - MGP_BALBcJ_P0058092 Nkx2-2 protein_coding protein_coding MGP_BALBcJ_T0058093.1 MGP_BALBcJ_G0026579.1 mouse_genomes_project 2 145730090 145738122 - Nkx2-2 protein_coding processed_transcript MGP_BALBcJ_T0058094.1 MGP_BALBcJ_G0026579.1 mouse_genomes_project 2 145730167 145738121 - Nkx2-2 protein_coding processed_transcript MGP_BALBcJ_T0058279.1 MGP_BALBcJ_G0026645.1 mouse_genomes_project 2 151192845 151199051 - Defb45 protein_coding processed_transcript MGP_BALBcJ_T0058280.1 MGP_BALBcJ_G0026645.1 mouse_genomes_project 2 151192845 151196134 - MGP_BALBcJ_P0058280 Defb45 protein_coding protein_coding MGP_BALBcJ_T0052384.1 MGP_BALBcJ_G0025298.1 mouse_genomes_project 2 2833342 2834197 - Gm13199 protein_coding processed_transcript MGP_BALBcJ_T0052385.1 MGP_BALBcJ_G0025298.1 mouse_genomes_project 2 2833343 2834186 - MGP_BALBcJ_P0052385 Gm13199 protein_coding protein_coding MGP_BALBcJ_T0055387.1 MGP_BALBcJ_G0025836.1 mouse_genomes_project 2 73957723 73971571 + MGP_BALBcJ_P0055387 Rbm45 protein_coding protein_coding MGP_BALBcJ_T0099714.1 MGP_BALBcJ_G0037750.1 mouse_genomes_project 2 180005314 180005421 + Gm22502 snRNA snRNA MGP_BALBcJ_T0055690.1 MGP_BALBcJ_G0025905.1 mouse_genomes_project 2 83202854 83203998 - MGP_BALBcJ_P0055690 protein_coding protein_coding MGP_BALBcJ_T0099717.1 MGP_BALBcJ_G0037753.1 mouse_genomes_project 2 180843119 180843282 + Gm25184 snRNA snRNA MGP_BALBcJ_T0056875.1 MGP_BALBcJ_G0026320.1 mouse_genomes_project 2 117655444 117665271 - Oip5 protein_coding retained_intron MGP_BALBcJ_T0056876.1 MGP_BALBcJ_G0026320.1 mouse_genomes_project 2 117655887 117665271 - MGP_BALBcJ_P0056876 Oip5 protein_coding protein_coding MGP_BALBcJ_T0013409.1 MGP_BALBcJ_G0011506.1 mouse_genomes_project 2 11775588 11775967 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055346.1 MGP_BALBcJ_G0025817.1 mouse_genomes_project 2 72236479 72239767 + MGP_BALBcJ_P0055346 Hoxd13 protein_coding protein_coding MGP_BALBcJ_T0052300.1 MGP_BALBcJ_G0025284.1 mouse_genomes_project 2 489942 490284 + MGP_BALBcJ_P0052300 protein_coding protein_coding MGP_BALBcJ_T0102383.1 MGP_BALBcJ_G0040199.1 mouse_genomes_project 2 19588470 19588961 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058565.1 MGP_BALBcJ_G0026715.1 mouse_genomes_project 2 154460609 154488142 - MGP_BALBcJ_P0058565 Edem2 protein_coding protein_coding MGP_BALBcJ_T0058566.1 MGP_BALBcJ_G0026715.1 mouse_genomes_project 2 154464653 154472217 - Edem2 protein_coding processed_transcript MGP_BALBcJ_T0058567.1 MGP_BALBcJ_G0026715.1 mouse_genomes_project 2 154467486 154469891 - Edem2 protein_coding retained_intron MGP_BALBcJ_T0058568.1 MGP_BALBcJ_G0026715.1 mouse_genomes_project 2 154467904 154475279 - Edem2 protein_coding retained_intron MGP_BALBcJ_T0056707.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113869959 114072786 - MGP_BALBcJ_P0056707 Meis2 protein_coding protein_coding MGP_BALBcJ_T0056708.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113869959 114073582 - MGP_BALBcJ_P0056708 Meis2 protein_coding protein_coding MGP_BALBcJ_T0056709.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113869959 114073582 - MGP_BALBcJ_P0056709 Meis2 protein_coding protein_coding MGP_BALBcJ_T0056710.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113869959 114072786 - MGP_BALBcJ_P0056710 Meis2 protein_coding protein_coding MGP_BALBcJ_T0056711.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113870039 114072460 - MGP_BALBcJ_P0056711 Meis2 protein_coding protein_coding MGP_BALBcJ_T0056712.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113870194 114072253 - MGP_BALBcJ_P0056712 Meis2 protein_coding protein_coding MGP_BALBcJ_T0056713.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113870797 113879838 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056714.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113871120 113875753 - Meis2 protein_coding retained_intron MGP_BALBcJ_T0056715.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113871166 114049684 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056716.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113871211 113879749 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056717.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113871352 113879838 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056718.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113871761 113879857 - Meis2 protein_coding retained_intron MGP_BALBcJ_T0056719.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113873765 113879841 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056720.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 113928837 114057329 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056721.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 114003313 114070264 - Meis2 protein_coding retained_intron MGP_BALBcJ_T0056722.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 114046291 114056861 - Meis2 protein_coding retained_intron MGP_BALBcJ_T0056723.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 114056732 114071321 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056724.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 114056732 114070434 - Meis2 protein_coding processed_transcript MGP_BALBcJ_T0056725.1 MGP_BALBcJ_G0026280.1 mouse_genomes_project 2 114056755 114066726 - Meis2 protein_coding retained_intron MGP_BALBcJ_T0004055.1 MGP_BALBcJ_G0003597.1 mouse_genomes_project 2 119953230 119954168 - Gm14019 antisense antisense MGP_BALBcJ_T0013538.1 MGP_BALBcJ_G0011635.1 mouse_genomes_project 2 56378064 56379067 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010352.1 MGP_BALBcJ_G0008477.1 mouse_genomes_project 2 7521014 7521135 + Mir466l miRNA miRNA MGP_BALBcJ_T0102450.1 MGP_BALBcJ_G0040266.1 mouse_genomes_project 2 176832708 176835633 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0055685.1 MGP_BALBcJ_G0025900.1 mouse_genomes_project 2 82950194 82951307 - MGP_BALBcJ_P0055685 Olfr995 protein_coding protein_coding MGP_BALBcJ_T0013684.1 MGP_BALBcJ_G0011781.1 mouse_genomes_project 2 106504540 106504800 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099663.1 MGP_BALBcJ_G0037699.1 mouse_genomes_project 2 22296274 22296379 + Gm22572 snRNA snRNA MGP_BALBcJ_T0013484.1 MGP_BALBcJ_G0011581.1 mouse_genomes_project 2 36564568 36564884 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054078.1 MGP_BALBcJ_G0025579.1 mouse_genomes_project 2 29654708 29657798 - Lcn2 protein_coding processed_transcript MGP_BALBcJ_T0054079.1 MGP_BALBcJ_G0025579.1 mouse_genomes_project 2 29654714 29656075 - Lcn2 protein_coding retained_intron MGP_BALBcJ_T0054080.1 MGP_BALBcJ_G0025579.1 mouse_genomes_project 2 29654940 29658154 - MGP_BALBcJ_P0054080 Lcn2 protein_coding protein_coding MGP_BALBcJ_T0054081.1 MGP_BALBcJ_G0025579.1 mouse_genomes_project 2 29655258 29656183 - Lcn2 protein_coding retained_intron MGP_BALBcJ_T0054082.1 MGP_BALBcJ_G0025579.1 mouse_genomes_project 2 29655520 29658328 - MGP_BALBcJ_P0054082 Lcn2 protein_coding protein_coding MGP_BALBcJ_T0054083.1 MGP_BALBcJ_G0025579.1 mouse_genomes_project 2 29656631 29657835 - Lcn2 protein_coding retained_intron MGP_BALBcJ_T0007191.1 MGP_BALBcJ_G0005894.1 mouse_genomes_project 2 59851595 59855858 - Gm13565 lincRNA lincRNA MGP_BALBcJ_T0004035.1 MGP_BALBcJ_G0003582.1 mouse_genomes_project 2 103664855 103665955 + Gm13954 antisense antisense MGP_BALBcJ_T0055382.1 MGP_BALBcJ_G0025833.1 mouse_genomes_project 2 73528077 73565819 - MGP_BALBcJ_P0055382 protein_coding protein_coding MGP_BALBcJ_T0057238.1 MGP_BALBcJ_G0026377.1 mouse_genomes_project 2 120122016 120148732 + MGP_BALBcJ_P0057238 protein_coding protein_coding MGP_BALBcJ_T0010452.1 MGP_BALBcJ_G0008577.1 mouse_genomes_project 2 154381951 154382030 + Mir499 miRNA miRNA MGP_BALBcJ_T0013820.1 MGP_BALBcJ_G0011917.1 mouse_genomes_project 2 155620208 155629670 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017754.1 MGP_BALBcJ_G0015371.1 mouse_genomes_project 2 75480405 75482120 - Gm13727 processed_transcript processed_transcript MGP_BALBcJ_T0007128.1 MGP_BALBcJ_G0005845.1 mouse_genomes_project 2 16768639 16778161 - Gm13346 lincRNA lincRNA MGP_BALBcJ_T0101884.1 MGP_BALBcJ_G0039783.1 mouse_genomes_project 2 34546950 34550863 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101885.1 MGP_BALBcJ_G0039783.1 mouse_genomes_project 2 34550431 34551376 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0099658.1 MGP_BALBcJ_G0037694.1 mouse_genomes_project 2 8096949 8097082 - Gm26478 snRNA snRNA MGP_BALBcJ_T0056628.1 MGP_BALBcJ_G0026248.1 mouse_genomes_project 2 109954882 109955845 - MGP_BALBcJ_P0056628 Olfr1308 protein_coding protein_coding MGP_BALBcJ_T0013628.1 MGP_BALBcJ_G0011725.1 mouse_genomes_project 2 85254111 85254404 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013786.1 MGP_BALBcJ_G0011883.1 mouse_genomes_project 2 146968610 146968845 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013796.1 MGP_BALBcJ_G0011893.1 mouse_genomes_project 2 150389118 150390257 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055721.1 MGP_BALBcJ_G0025935.1 mouse_genomes_project 2 83845296 83862636 - MGP_BALBcJ_P0055721 protein_coding protein_coding MGP_BALBcJ_T0013529.1 MGP_BALBcJ_G0011626.1 mouse_genomes_project 2 53488231 53488464 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054547.1 MGP_BALBcJ_G0025679.1 mouse_genomes_project 2 36306790 36315484 + MGP_BALBcJ_P0054547 Wdr38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054548.1 MGP_BALBcJ_G0025679.1 mouse_genomes_project 2 36307633 36310897 + MGP_BALBcJ_P0054548 Wdr38 protein_coding protein_coding MGP_BALBcJ_T0054549.1 MGP_BALBcJ_G0025679.1 mouse_genomes_project 2 36307646 36309589 + Wdr38 protein_coding processed_transcript MGP_BALBcJ_T0055795.1 MGP_BALBcJ_G0025999.1 mouse_genomes_project 2 85506915 85507866 + MGP_BALBcJ_P0055795 Olfr152 protein_coding protein_coding MGP_BALBcJ_T0055796.1 MGP_BALBcJ_G0025999.1 mouse_genomes_project 2 85506921 85507866 + MGP_BALBcJ_P0055796 Olfr152 protein_coding protein_coding MGP_BALBcJ_T0055195.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706599 68758114 + MGP_BALBcJ_P0055195 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055196.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706634 68758110 + MGP_BALBcJ_P0055196 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055197.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706634 68758119 + MGP_BALBcJ_P0055197 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055198.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706651 68758107 + MGP_BALBcJ_P0055198 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055199.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706699 68742160 + Dync1i2 protein_coding processed_transcript MGP_BALBcJ_T0055200.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706727 68758119 + MGP_BALBcJ_P0055200 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055201.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706865 68758113 + MGP_BALBcJ_P0055201 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055202.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706877 68757675 + MGP_BALBcJ_P0055202 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055203.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706885 68758119 + MGP_BALBcJ_P0055203 Dync1i2 protein_coding protein_coding MGP_BALBcJ_T0055204.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68706897 68725682 + Dync1i2 protein_coding retained_intron MGP_BALBcJ_T0055205.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68729939 68755270 + Dync1i2 protein_coding retained_intron MGP_BALBcJ_T0055206.1 MGP_BALBcJ_G0025792.1 mouse_genomes_project 2 68755362 68757874 + Dync1i2 protein_coding retained_intron MGP_BALBcJ_T0052731.1 MGP_BALBcJ_G0025354.1 mouse_genomes_project 2 16460477 16471784 + Msrb2 protein_coding processed_transcript MGP_BALBcJ_T0052732.1 MGP_BALBcJ_G0025354.1 mouse_genomes_project 2 16460673 16483484 + MGP_BALBcJ_P0052732 Msrb2 protein_coding protein_coding MGP_BALBcJ_T0052733.1 MGP_BALBcJ_G0025354.1 mouse_genomes_project 2 16460705 16481828 + Msrb2 protein_coding processed_transcript MGP_BALBcJ_T0052734.1 MGP_BALBcJ_G0025354.1 mouse_genomes_project 2 16460878 16482772 + Msrb2 protein_coding processed_transcript MGP_BALBcJ_T0100962.1 MGP_BALBcJ_G0038998.1 mouse_genomes_project 2 92462421 92462552 + Gm24318 snoRNA snoRNA MGP_BALBcJ_T0057841.1 MGP_BALBcJ_G0026522.1 mouse_genomes_project 2 131270480 131276891 - Trmt6 protein_coding retained_intron MGP_BALBcJ_T0057842.1 MGP_BALBcJ_G0026522.1 mouse_genomes_project 2 131270480 131282313 - Trmt6 protein_coding processed_transcript MGP_BALBcJ_T0057843.1 MGP_BALBcJ_G0026522.1 mouse_genomes_project 2 131270480 131282312 - MGP_BALBcJ_P0057843 Trmt6 protein_coding protein_coding MGP_BALBcJ_T0057844.1 MGP_BALBcJ_G0026522.1 mouse_genomes_project 2 131276672 131282016 - Trmt6 protein_coding processed_transcript MGP_BALBcJ_T0057845.1 MGP_BALBcJ_G0026522.1 mouse_genomes_project 2 131276697 131278765 - Trmt6 protein_coding processed_transcript MGP_BALBcJ_T0057846.1 MGP_BALBcJ_G0026522.1 mouse_genomes_project 2 131278024 131282271 - Trmt6 protein_coding processed_transcript MGP_BALBcJ_T0057706.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129485728 129489161 - Adam33 protein_coding retained_intron MGP_BALBcJ_T0057707.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129485954 129498970 - MGP_BALBcJ_P0057707 Adam33 protein_coding protein_coding MGP_BALBcJ_T0057708.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129485962 129498725 - Adam33 protein_coding retained_intron MGP_BALBcJ_T0057709.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129486000 129491508 - MGP_BALBcJ_P0057709 Adam33 protein_coding protein_coding MGP_BALBcJ_T0057710.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129486012 129498701 - MGP_BALBcJ_P0057710 Adam33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057711.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129486246 129498970 - MGP_BALBcJ_P0057711 Adam33 protein_coding protein_coding MGP_BALBcJ_T0057712.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129486247 129491622 - Adam33 protein_coding retained_intron MGP_BALBcJ_T0057713.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129488166 129489651 - MGP_BALBcJ_P0057713 Adam33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057714.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129488214 129489641 - Adam33 protein_coding processed_transcript MGP_BALBcJ_T0057715.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129488345 129489184 - Adam33 protein_coding processed_transcript MGP_BALBcJ_T0057716.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129488646 129489654 - Adam33 protein_coding retained_intron MGP_BALBcJ_T0057717.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129492693 129498669 - MGP_BALBcJ_P0057717 Adam33 protein_coding protein_coding MGP_BALBcJ_T0057718.1 MGP_BALBcJ_G0026495.1 mouse_genomes_project 2 129497229 129498699 - Adam33 protein_coding retained_intron MGP_BALBcJ_T0057926.1 MGP_BALBcJ_G0026542.1 mouse_genomes_project 2 138322278 138561063 - MGP_BALBcJ_P0057926 Tasp1 protein_coding protein_coding MGP_BALBcJ_T0057927.1 MGP_BALBcJ_G0026542.1 mouse_genomes_project 2 138322278 138561038 - MGP_BALBcJ_P0057927 Tasp1 protein_coding protein_coding MGP_BALBcJ_T0057928.1 MGP_BALBcJ_G0026542.1 mouse_genomes_project 2 138322278 138561083 - MGP_BALBcJ_P0057928 Tasp1 protein_coding protein_coding MGP_BALBcJ_T0057929.1 MGP_BALBcJ_G0026542.1 mouse_genomes_project 2 138469686 138536501 - Tasp1 protein_coding retained_intron MGP_BALBcJ_T0055509.1 MGP_BALBcJ_G0025854.1 mouse_genomes_project 2 77418504 77719410 - MGP_BALBcJ_P0055509 Pde1a protein_coding protein_coding MGP_BALBcJ_T0055510.1 MGP_BALBcJ_G0025854.1 mouse_genomes_project 2 77437693 77494664 - MGP_BALBcJ_P0055510 Pde1a protein_coding protein_coding MGP_BALBcJ_T0055511.1 MGP_BALBcJ_G0025854.1 mouse_genomes_project 2 77437693 77494664 - MGP_BALBcJ_P0055511 Pde1a protein_coding protein_coding MGP_BALBcJ_T0055512.1 MGP_BALBcJ_G0025854.1 mouse_genomes_project 2 77443700 77514309 - MGP_BALBcJ_P0055512 Pde1a protein_coding protein_coding MGP_BALBcJ_T0055513.1 MGP_BALBcJ_G0025854.1 mouse_genomes_project 2 77491581 77623798 - Pde1a protein_coding processed_transcript MGP_BALBcJ_T0055514.1 MGP_BALBcJ_G0025854.1 mouse_genomes_project 2 77499918 77720034 - Pde1a protein_coding processed_transcript MGP_BALBcJ_T0054463.1 MGP_BALBcJ_G0025659.1 mouse_genomes_project 2 34359247 34362762 + MGP_BALBcJ_P0054463 Olfr360 protein_coding protein_coding MGP_BALBcJ_T0054464.1 MGP_BALBcJ_G0025659.1 mouse_genomes_project 2 34361808 34362762 + MGP_BALBcJ_P0054464 Olfr360 protein_coding protein_coding MGP_BALBcJ_T0004072.1 MGP_BALBcJ_G0003609.1 mouse_genomes_project 2 129592391 129603904 + Gm14232 antisense antisense MGP_BALBcJ_T0054917.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59128795 59222861 + MGP_BALBcJ_P0054917 Psmd14 protein_coding protein_coding MGP_BALBcJ_T0054918.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59128843 59137897 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0054919.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59128861 59187090 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0054920.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59128881 59147065 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0054921.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59128892 59183562 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0054922.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59132924 59173238 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0054923.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59187567 59222538 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0054924.1 MGP_BALBcJ_G0025737.1 mouse_genomes_project 2 59199054 59222559 + Psmd14 protein_coding processed_transcript MGP_BALBcJ_T0052623.1 MGP_BALBcJ_G0025335.1 mouse_genomes_project 2 11304506 11409556 + MGP_BALBcJ_P0052623 Mrc1 protein_coding protein_coding MGP_BALBcJ_T0052624.1 MGP_BALBcJ_G0025335.1 mouse_genomes_project 2 11406059 11409426 + Mrc1 protein_coding retained_intron MGP_BALBcJ_T0056069.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89057854 89070462 + MGP_BALBcJ_P0056069 Arfgap2 protein_coding protein_coding MGP_BALBcJ_T0056070.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89057885 89059523 + Arfgap2 protein_coding retained_intron MGP_BALBcJ_T0056071.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89057894 89068774 + MGP_BALBcJ_P0056071 Arfgap2 protein_coding protein_coding MGP_BALBcJ_T0056072.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89057895 89061721 + Arfgap2 protein_coding retained_intron MGP_BALBcJ_T0056073.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89058263 89060365 + Arfgap2 protein_coding processed_transcript MGP_BALBcJ_T0056074.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89062310 89066596 + Arfgap2 protein_coding retained_intron MGP_BALBcJ_T0056075.1 MGP_BALBcJ_G0026118.1 mouse_genomes_project 2 89063060 89067114 + Arfgap2 protein_coding retained_intron MGP_BALBcJ_T0053547.1 MGP_BALBcJ_G0025504.1 mouse_genomes_project 2 25874583 25990633 + MGP_BALBcJ_P0053547 Ak8 protein_coding protein_coding MGP_BALBcJ_T0053548.1 MGP_BALBcJ_G0025504.1 mouse_genomes_project 2 25874626 25909431 + Ak8 protein_coding processed_transcript MGP_BALBcJ_T0053549.1 MGP_BALBcJ_G0025504.1 mouse_genomes_project 2 25917235 25935136 + Ak8 protein_coding processed_transcript MGP_BALBcJ_T0099654.1 MGP_BALBcJ_G0037690.1 mouse_genomes_project 2 225872 226013 - Gm22005 snRNA snRNA MGP_BALBcJ_T0013625.1 MGP_BALBcJ_G0011722.1 mouse_genomes_project 2 85037679 85037875 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057567.1 MGP_BALBcJ_G0026462.1 mouse_genomes_project 2 127540623 127571117 - MGP_BALBcJ_P0057567 Ckap2l protein_coding protein_coding MGP_BALBcJ_T0057725.1 MGP_BALBcJ_G0026498.1 mouse_genomes_project 2 129566243 129566968 + MGP_BALBcJ_P0057725 Gm11037 protein_coding protein_coding MGP_BALBcJ_T0055755.1 MGP_BALBcJ_G0025968.1 mouse_genomes_project 2 84755103 84756042 - MGP_BALBcJ_P0055755 Olfr259 protein_coding protein_coding MGP_BALBcJ_T0053226.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23049427 23059496 - MGP_BALBcJ_P0053226 protein_coding unknown_likely_coding MGP_BALBcJ_T0053227.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23049708 23088868 - MGP_BALBcJ_P0053227 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053228.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23051275 23056905 - protein_coding processed_transcript MGP_BALBcJ_T0053229.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23051286 23055958 - protein_coding processed_transcript MGP_BALBcJ_T0053230.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23060526 23105213 - MGP_BALBcJ_P0053230 protein_coding unknown_likely_coding MGP_BALBcJ_T0053231.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23060526 23105213 - MGP_BALBcJ_P0053231 protein_coding unknown_likely_coding MGP_BALBcJ_T0053232.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23066949 23088997 - MGP_BALBcJ_P0053232 protein_coding protein_coding MGP_BALBcJ_T0053233.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23066968 23087910 - MGP_BALBcJ_P0053233 protein_coding protein_coding MGP_BALBcJ_T0053234.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23067142 23088905 - MGP_BALBcJ_P0053234 protein_coding protein_coding MGP_BALBcJ_T0053235.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23078229 23105483 - MGP_BALBcJ_P0053235 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053236.1 MGP_BALBcJ_G0025448.1 mouse_genomes_project 2 23087903 23105331 - MGP_BALBcJ_P0053236 protein_coding protein_coding MGP_BALBcJ_T0013477.1 MGP_BALBcJ_G0011574.1 mouse_genomes_project 2 34940410 34940786 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007389.1 MGP_BALBcJ_G0006056.1 mouse_genomes_project 2 168422896 168429297 + Gm14250 lincRNA lincRNA MGP_BALBcJ_T0059178.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163745253 163763551 - MGP_BALBcJ_P0059178 Pltp protein_coding protein_coding MGP_BALBcJ_T0059179.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163745253 163763629 - MGP_BALBcJ_P0059179 Pltp protein_coding protein_coding MGP_BALBcJ_T0059180.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163745253 163763460 - MGP_BALBcJ_P0059180 Pltp protein_coding protein_coding MGP_BALBcJ_T0059181.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163752921 163762714 - Pltp protein_coding retained_intron MGP_BALBcJ_T0059182.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163758391 163763544 - Pltp protein_coding processed_transcript MGP_BALBcJ_T0059183.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163758528 163763538 - MGP_BALBcJ_P0059183 Pltp protein_coding protein_coding MGP_BALBcJ_T0059184.1 MGP_BALBcJ_G0026856.1 mouse_genomes_project 2 163760239 163763548 - MGP_BALBcJ_P0059184 Pltp protein_coding protein_coding MGP_BALBcJ_T0001026.1 MGP_BALBcJ_G0000954.1 mouse_genomes_project 2 8704082 8704503 + TEC TEC MGP_BALBcJ_T0057628.1 MGP_BALBcJ_G0026477.1 mouse_genomes_project 2 128799756 128801923 + MGP_BALBcJ_P0057628 Gm28372 protein_coding protein_coding MGP_BALBcJ_T0054493.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34763517 34927887 - MGP_BALBcJ_P0054493 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054499.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34850740 34874771 - protein_coding processed_transcript MGP_BALBcJ_T0054500.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34860262 34867236 - MGP_BALBcJ_P0054500 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054501.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34864754 34930151 - MGP_BALBcJ_P0054501 protein_coding unknown_likely_coding MGP_BALBcJ_T0054502.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34915530 34985190 - protein_coding processed_transcript MGP_BALBcJ_T0054503.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34916059 34938820 - MGP_BALBcJ_P0054503 protein_coding protein_coding MGP_BALBcJ_T0054504.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34921471 34985701 - MGP_BALBcJ_P0054504 protein_coding protein_coding MGP_BALBcJ_T0054505.1 MGP_BALBcJ_G0025669.1 mouse_genomes_project 2 34927787 34984991 - protein_coding processed_transcript MGP_BALBcJ_T0055849.1 MGP_BALBcJ_G0026048.1 mouse_genomes_project 2 86791658 86792594 - MGP_BALBcJ_P0055849 Olfr1214 protein_coding protein_coding MGP_BALBcJ_T0007353.1 MGP_BALBcJ_G0006025.1 mouse_genomes_project 2 159766268 159767376 - Gm14228 lincRNA lincRNA MGP_BALBcJ_T0010392.1 MGP_BALBcJ_G0008517.1 mouse_genomes_project 2 35500211 35500293 - Gm44455 miRNA miRNA MGP_BALBcJ_T0011493.1 MGP_BALBcJ_G0009618.1 mouse_genomes_project 2 129107740 129114916 - Gm24893 misc_RNA misc_RNA MGP_BALBcJ_T0055151.1 MGP_BALBcJ_G0025784.1 mouse_genomes_project 2 68001572 68034650 + MGP_BALBcJ_P0055151 Erich2 protein_coding protein_coding MGP_BALBcJ_T0055152.1 MGP_BALBcJ_G0025784.1 mouse_genomes_project 2 68001584 68034650 + MGP_BALBcJ_P0055152 Erich2 protein_coding protein_coding MGP_BALBcJ_T0055153.1 MGP_BALBcJ_G0025784.1 mouse_genomes_project 2 68002213 68030996 + Erich2 protein_coding retained_intron MGP_BALBcJ_T0055154.1 MGP_BALBcJ_G0025784.1 mouse_genomes_project 2 68002213 68016218 + Erich2 protein_coding retained_intron MGP_BALBcJ_T0055155.1 MGP_BALBcJ_G0025784.1 mouse_genomes_project 2 68002250 68021097 + MGP_BALBcJ_P0055155 Erich2 protein_coding protein_coding MGP_BALBcJ_T0013861.1 MGP_BALBcJ_G0011958.1 mouse_genomes_project 2 178533029 178533616 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056096.1 MGP_BALBcJ_G0026122.1 mouse_genomes_project 2 89428979 89440065 - MGP_BALBcJ_P0056096 F2 protein_coding protein_coding MGP_BALBcJ_T0056097.1 MGP_BALBcJ_G0026122.1 mouse_genomes_project 2 89428988 89440058 - MGP_BALBcJ_P0056097 F2 protein_coding protein_coding MGP_BALBcJ_T0056098.1 MGP_BALBcJ_G0026122.1 mouse_genomes_project 2 89434825 89440046 - F2 protein_coding processed_transcript MGP_BALBcJ_T0011504.1 MGP_BALBcJ_G0009629.1 mouse_genomes_project 2 173412181 173412245 + Gm27899 misc_RNA misc_RNA MGP_BALBcJ_T0013425.1 MGP_BALBcJ_G0011522.1 mouse_genomes_project 2 15714693 15715010 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013844.1 MGP_BALBcJ_G0011941.1 mouse_genomes_project 2 165958306 165960389 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010316.1 MGP_BALBcJ_G0008441.1 mouse_genomes_project 2 7489178 7489286 + Gm22677 miRNA miRNA MGP_BALBcJ_T0013595.1 MGP_BALBcJ_G0011692.1 mouse_genomes_project 2 76941399 76941930 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056635.1 MGP_BALBcJ_G0026255.1 mouse_genomes_project 2 110122305 110123297 - MGP_BALBcJ_P0056635 protein_coding protein_coding MGP_BALBcJ_T0102390.1 MGP_BALBcJ_G0040206.1 mouse_genomes_project 2 33826051 33826354 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0056490.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103073941 103124534 + MGP_BALBcJ_P0056490 Wt1 protein_coding protein_coding MGP_BALBcJ_T0056491.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103074468 103121313 + MGP_BALBcJ_P0056491 Wt1 protein_coding protein_coding MGP_BALBcJ_T0056492.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103074473 103121236 + MGP_BALBcJ_P0056492 Wt1 protein_coding protein_coding MGP_BALBcJ_T0056493.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103074473 103121315 + MGP_BALBcJ_P0056493 Wt1 protein_coding protein_coding MGP_BALBcJ_T0056494.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103078274 103081775 + Wt1 protein_coding retained_intron MGP_BALBcJ_T0056495.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103078357 103124534 + MGP_BALBcJ_P0056495 Wt1 protein_coding protein_coding MGP_BALBcJ_T0056496.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103078357 103124538 + MGP_BALBcJ_P0056496 Wt1 protein_coding protein_coding MGP_BALBcJ_T0056497.1 MGP_BALBcJ_G0026197.1 mouse_genomes_project 2 103111786 103118982 + Wt1 protein_coding retained_intron MGP_BALBcJ_T0058782.1 MGP_BALBcJ_G0026749.1 mouse_genomes_project 2 155798189 155863875 - MGP_BALBcJ_P0058782 Soga1 protein_coding protein_coding MGP_BALBcJ_T0058783.1 MGP_BALBcJ_G0026749.1 mouse_genomes_project 2 155803246 155809843 - Soga1 protein_coding processed_transcript MGP_BALBcJ_T0058784.1 MGP_BALBcJ_G0026749.1 mouse_genomes_project 2 155820600 155823776 - Soga1 protein_coding processed_transcript MGP_BALBcJ_T0052509.1 MGP_BALBcJ_G0025319.1 mouse_genomes_project 2 8660295 8714535 + MGP_BALBcJ_P0052509 Il2ra protein_coding protein_coding MGP_BALBcJ_T0052510.1 MGP_BALBcJ_G0025319.1 mouse_genomes_project 2 8660337 8666245 + MGP_BALBcJ_P0052510 Il2ra protein_coding protein_coding MGP_BALBcJ_T0052511.1 MGP_BALBcJ_G0025319.1 mouse_genomes_project 2 8700664 8701166 + Il2ra protein_coding retained_intron MGP_BALBcJ_T0010458.1 MGP_BALBcJ_G0008583.1 mouse_genomes_project 2 157903375 157903468 + Gm44319 miRNA miRNA MGP_BALBcJ_T0057424.1 MGP_BALBcJ_G0026424.1 mouse_genomes_project 2 125323921 125340907 + Blvra protein_coding retained_intron MGP_BALBcJ_T0057425.1 MGP_BALBcJ_G0026424.1 mouse_genomes_project 2 125323923 125350170 + MGP_BALBcJ_P0057425 Blvra protein_coding protein_coding MGP_BALBcJ_T0057426.1 MGP_BALBcJ_G0026424.1 mouse_genomes_project 2 125323935 125343415 + MGP_BALBcJ_P0057426 Blvra protein_coding protein_coding MGP_BALBcJ_T0057427.1 MGP_BALBcJ_G0026424.1 mouse_genomes_project 2 125323949 125340456 + MGP_BALBcJ_P0057427 Blvra protein_coding protein_coding MGP_BALBcJ_T0057428.1 MGP_BALBcJ_G0026424.1 mouse_genomes_project 2 125333584 125345230 + MGP_BALBcJ_P0057428 Blvra protein_coding protein_coding MGP_BALBcJ_T0055745.1 MGP_BALBcJ_G0025958.1 mouse_genomes_project 2 84562861 84564680 - MGP_BALBcJ_P0055745 Olfr1098 protein_coding protein_coding MGP_BALBcJ_T0058144.1 MGP_BALBcJ_G0026601.1 mouse_genomes_project 2 148902038 148906215 + MGP_BALBcJ_P0058144 protein_coding protein_coding MGP_BALBcJ_T0001073.1 MGP_BALBcJ_G0001001.1 mouse_genomes_project 2 36717282 36718342 - TEC TEC MGP_BALBcJ_T0059846.1 MGP_BALBcJ_G0026999.1 mouse_genomes_project 2 180824029 180825804 + MGP_BALBcJ_P0059846 Abhd16b protein_coding protein_coding MGP_BALBcJ_T0013778.1 MGP_BALBcJ_G0011875.1 mouse_genomes_project 2 145425262 145425864 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013471.1 MGP_BALBcJ_G0011568.1 mouse_genomes_project 2 34045580 34046153 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058237.1 MGP_BALBcJ_G0026625.1 mouse_genomes_project 2 150679022 150693242 + MGP_BALBcJ_P0058237 Scrt2 protein_coding protein_coding MGP_BALBcJ_T0017688.1 MGP_BALBcJ_G0015330.1 mouse_genomes_project 2 1226641 1242891 - Gm13187 processed_transcript processed_transcript MGP_BALBcJ_T0017689.1 MGP_BALBcJ_G0015330.1 mouse_genomes_project 2 1232974 1242946 - Gm13187 processed_transcript processed_transcript MGP_BALBcJ_T0017690.1 MGP_BALBcJ_G0015330.1 mouse_genomes_project 2 1242309 1242946 - Gm13187 processed_transcript processed_transcript MGP_BALBcJ_T0054579.1 MGP_BALBcJ_G0025684.1 mouse_genomes_project 2 36520950 36558334 - MGP_BALBcJ_P0054579 Ppp6c protein_coding protein_coding MGP_BALBcJ_T0054580.1 MGP_BALBcJ_G0025684.1 mouse_genomes_project 2 36523324 36558375 - MGP_BALBcJ_P0054580 Ppp6c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054581.1 MGP_BALBcJ_G0025684.1 mouse_genomes_project 2 36523367 36558413 - MGP_BALBcJ_P0054581 Ppp6c protein_coding protein_coding MGP_BALBcJ_T0054582.1 MGP_BALBcJ_G0025684.1 mouse_genomes_project 2 36524087 36527581 - Ppp6c protein_coding processed_transcript MGP_BALBcJ_T0056176.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183047 90188985 - MGP_BALBcJ_P0056176 Gyltl1b protein_coding protein_coding MGP_BALBcJ_T0056177.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183047 90189056 - MGP_BALBcJ_P0056177 Gyltl1b protein_coding protein_coding MGP_BALBcJ_T0056178.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183048 90189035 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056179.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183052 90189017 - MGP_BALBcJ_P0056179 Gyltl1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056180.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183053 90189010 - MGP_BALBcJ_P0056180 Gyltl1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056181.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183061 90189027 - MGP_BALBcJ_P0056181 Gyltl1b protein_coding protein_coding MGP_BALBcJ_T0056182.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183061 90189966 - MGP_BALBcJ_P0056182 Gyltl1b protein_coding protein_coding MGP_BALBcJ_T0056183.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183072 90189032 - MGP_BALBcJ_P0056183 Gyltl1b protein_coding protein_coding MGP_BALBcJ_T0056184.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183793 90184523 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056185.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90183976 90184778 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056186.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90185019 90187476 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056187.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90185315 90187663 - Gyltl1b protein_coding processed_transcript MGP_BALBcJ_T0056188.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90185388 90188072 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056189.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90186070 90189032 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056190.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90187707 90189017 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0056191.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90187933 90192868 - MGP_BALBcJ_P0056191 Gyltl1b protein_coding protein_coding MGP_BALBcJ_T0056192.1 MGP_BALBcJ_G0026134.1 mouse_genomes_project 2 90187983 90189944 - Gyltl1b protein_coding retained_intron MGP_BALBcJ_T0055031.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 63933663 64098977 - MGP_BALBcJ_P0055031 Scn9a protein_coding protein_coding MGP_BALBcJ_T0055032.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 63933663 64098977 - MGP_BALBcJ_P0055032 Scn9a protein_coding protein_coding MGP_BALBcJ_T0055033.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 63935674 64098678 - MGP_BALBcJ_P0055033 Scn9a protein_coding protein_coding MGP_BALBcJ_T0055034.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 63935674 64098678 - MGP_BALBcJ_P0055034 Scn9a protein_coding protein_coding MGP_BALBcJ_T0055035.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 63936700 64098678 - MGP_BALBcJ_P0055035 Scn9a protein_coding protein_coding MGP_BALBcJ_T0055036.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 64001804 64004965 - Scn9a protein_coding retained_intron MGP_BALBcJ_T0055037.1 MGP_BALBcJ_G0025756.1 mouse_genomes_project 2 64026419 64098987 - Scn9a protein_coding retained_intron MGP_BALBcJ_T0010398.1 MGP_BALBcJ_G0008523.1 mouse_genomes_project 2 54239617 54239714 + Mir195b miRNA miRNA MGP_BALBcJ_T0098863.1 MGP_BALBcJ_G0036911.1 mouse_genomes_project 2 1124972 1127524 + Gm37107 sense_intronic sense_intronic MGP_BALBcJ_T0017788.1 MGP_BALBcJ_G0015390.1 mouse_genomes_project 2 104604139 104604614 - BB218582 processed_transcript processed_transcript MGP_BALBcJ_T0017789.1 MGP_BALBcJ_G0015390.1 mouse_genomes_project 2 104604142 104611580 - BB218582 processed_transcript processed_transcript MGP_BALBcJ_T0017790.1 MGP_BALBcJ_G0015390.1 mouse_genomes_project 2 104608435 104611550 - BB218582 processed_transcript processed_transcript MGP_BALBcJ_T0099690.1 MGP_BALBcJ_G0037726.1 mouse_genomes_project 2 111276030 111276196 + Gm26505 snRNA snRNA MGP_BALBcJ_T0058846.1 MGP_BALBcJ_G0026760.1 mouse_genomes_project 2 156554321 156707495 + MGP_BALBcJ_P0058846 Ctnnbl1 protein_coding protein_coding MGP_BALBcJ_T0058847.1 MGP_BALBcJ_G0026760.1 mouse_genomes_project 2 156605972 156624272 + Ctnnbl1 protein_coding processed_transcript MGP_BALBcJ_T0058848.1 MGP_BALBcJ_G0026760.1 mouse_genomes_project 2 156607388 156635353 + Ctnnbl1 protein_coding processed_transcript MGP_BALBcJ_T0058849.1 MGP_BALBcJ_G0026760.1 mouse_genomes_project 2 156607421 156651941 + Ctnnbl1 protein_coding processed_transcript MGP_BALBcJ_T0013715.1 MGP_BALBcJ_G0011812.1 mouse_genomes_project 2 119447716 119447963 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010425.1 MGP_BALBcJ_G0008550.1 mouse_genomes_project 2 101771016 101771112 - Gm22761 miRNA miRNA MGP_BALBcJ_T0054264.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31461727 31664543 - MGP_BALBcJ_P0054264 Pbx3 protein_coding protein_coding MGP_BALBcJ_T0054265.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31463142 31576378 - Pbx3 protein_coding processed_transcript MGP_BALBcJ_T0054266.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31463150 31664543 - MGP_BALBcJ_P0054266 Pbx3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054267.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31463150 31664543 - MGP_BALBcJ_P0054267 Pbx3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054268.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31467128 31663469 - MGP_BALBcJ_P0054268 Pbx3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054269.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31501041 31665746 - MGP_BALBcJ_P0054269 Pbx3 protein_coding protein_coding MGP_BALBcJ_T0054270.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31512038 31663876 - MGP_BALBcJ_P0054270 Pbx3 protein_coding protein_coding MGP_BALBcJ_T0054271.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31512165 31663773 - MGP_BALBcJ_P0054271 Pbx3 protein_coding protein_coding MGP_BALBcJ_T0054272.1 MGP_BALBcJ_G0025611.1 mouse_genomes_project 2 31660734 31664415 - Pbx3 protein_coding retained_intron MGP_BALBcJ_T0056442.1 MGP_BALBcJ_G0026183.1 mouse_genomes_project 2 101993680 102010018 + MGP_BALBcJ_P0056442 Cd59b protein_coding protein_coding MGP_BALBcJ_T0056443.1 MGP_BALBcJ_G0026183.1 mouse_genomes_project 2 101994769 102010159 + MGP_BALBcJ_P0056443 Cd59b protein_coding protein_coding MGP_BALBcJ_T0100929.1 MGP_BALBcJ_G0038965.1 mouse_genomes_project 2 23770364 23770491 - Snora43 snoRNA snoRNA MGP_BALBcJ_T0017832.1 MGP_BALBcJ_G0015408.1 mouse_genomes_project 2 127478836 127499335 - 9830144P21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017833.1 MGP_BALBcJ_G0015408.1 mouse_genomes_project 2 127497080 127503460 - 9830144P21Rik processed_transcript processed_transcript MGP_BALBcJ_T0004148.1 MGP_BALBcJ_G0003666.1 mouse_genomes_project 2 164069099 164073656 + Gm14397 antisense antisense MGP_BALBcJ_T0100949.1 MGP_BALBcJ_G0038985.1 mouse_genomes_project 2 51526785 51526918 + Gm22298 snoRNA snoRNA MGP_BALBcJ_T0056241.1 MGP_BALBcJ_G0026146.1 mouse_genomes_project 2 91401233 91403716 + MGP_BALBcJ_P0056241 Gm10803 protein_coding protein_coding MGP_BALBcJ_T0001060.1 MGP_BALBcJ_G0000988.1 mouse_genomes_project 2 33156852 33159840 + TEC TEC MGP_BALBcJ_T0058083.1 MGP_BALBcJ_G0026576.1 mouse_genomes_project 2 145398998 145518725 + MGP_BALBcJ_P0058083 Kiz protein_coding protein_coding MGP_BALBcJ_T0058084.1 MGP_BALBcJ_G0026576.1 mouse_genomes_project 2 145399043 145432513 + MGP_BALBcJ_P0058084 Kiz protein_coding protein_coding MGP_BALBcJ_T0058085.1 MGP_BALBcJ_G0026576.1 mouse_genomes_project 2 145500172 145518720 + Kiz protein_coding retained_intron MGP_BALBcJ_T0003980.1 MGP_BALBcJ_G0003549.1 mouse_genomes_project 2 66702891 66727700 + Gm13613 antisense antisense MGP_BALBcJ_T0010463.1 MGP_BALBcJ_G0008588.1 mouse_genomes_project 2 167046403 167046481 - Gm24327 miRNA miRNA MGP_BALBcJ_T0056500.1 MGP_BALBcJ_G0026199.1 mouse_genomes_project 2 103338735 103351875 - MGP_BALBcJ_P0056500 Rcn1 protein_coding protein_coding MGP_BALBcJ_T0056501.1 MGP_BALBcJ_G0026199.1 mouse_genomes_project 2 103339373 103347909 - Rcn1 protein_coding retained_intron MGP_BALBcJ_T0010446.1 MGP_BALBcJ_G0008571.1 mouse_genomes_project 2 144403198 144403386 + Gm25026 miRNA miRNA MGP_BALBcJ_T0059030.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528894 162604771 + Pkig protein_coding retained_intron MGP_BALBcJ_T0059031.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528894 162607171 + MGP_BALBcJ_P0059031 Pkig protein_coding protein_coding MGP_BALBcJ_T0059032.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528907 162607167 + MGP_BALBcJ_P0059032 Pkig protein_coding protein_coding MGP_BALBcJ_T0059033.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528923 162606701 + MGP_BALBcJ_P0059033 Pkig protein_coding protein_coding MGP_BALBcJ_T0059034.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528966 162602211 + MGP_BALBcJ_P0059034 Pkig protein_coding protein_coding MGP_BALBcJ_T0059035.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528985 162606804 + MGP_BALBcJ_P0059035 Pkig protein_coding protein_coding MGP_BALBcJ_T0059036.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162528988 162606531 + MGP_BALBcJ_P0059036 Pkig protein_coding protein_coding MGP_BALBcJ_T0059037.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162538026 162606486 + MGP_BALBcJ_P0059037 Pkig protein_coding protein_coding MGP_BALBcJ_T0059038.1 MGP_BALBcJ_G0026803.1 mouse_genomes_project 2 162574659 162607165 + MGP_BALBcJ_P0059038 Pkig protein_coding protein_coding MGP_BALBcJ_T0059947.1 MGP_BALBcJ_G0027013.1 mouse_genomes_project 2 181198226 181204720 + MGP_BALBcJ_P0059947 Polr3k protein_coding protein_coding MGP_BALBcJ_T0059948.1 MGP_BALBcJ_G0027013.1 mouse_genomes_project 2 181198249 181200099 + Polr3k protein_coding retained_intron MGP_BALBcJ_T0055804.1 MGP_BALBcJ_G0026007.1 mouse_genomes_project 2 85657499 85658444 - MGP_BALBcJ_P0055804 Olfr1155 protein_coding protein_coding MGP_BALBcJ_T0055696.1 MGP_BALBcJ_G0025911.1 mouse_genomes_project 2 83330623 83331553 - MGP_BALBcJ_P0055696 Olfr1016 protein_coding protein_coding MGP_BALBcJ_T0001067.1 MGP_BALBcJ_G0000995.1 mouse_genomes_project 2 35811277 35813879 - TEC TEC MGP_BALBcJ_T0056687.1 MGP_BALBcJ_G0026275.1 mouse_genomes_project 2 112016389 112023056 - MGP_BALBcJ_P0056687 Actc1 protein_coding protein_coding MGP_BALBcJ_T0056688.1 MGP_BALBcJ_G0026275.1 mouse_genomes_project 2 112021727 112023709 - MGP_BALBcJ_P0056688 Actc1 protein_coding protein_coding MGP_BALBcJ_T0098753.1 MGP_BALBcJ_G0036807.1 mouse_genomes_project 2 101961865 101962004 + Gm24644 scaRNA scaRNA MGP_BALBcJ_T0055069.1 MGP_BALBcJ_G0025766.1 mouse_genomes_project 2 66585667 66641982 + MGP_BALBcJ_P0055069 Nostrin protein_coding protein_coding MGP_BALBcJ_T0055070.1 MGP_BALBcJ_G0025766.1 mouse_genomes_project 2 66631993 66638200 + Nostrin protein_coding processed_transcript MGP_BALBcJ_T0013737.1 MGP_BALBcJ_G0011834.1 mouse_genomes_project 2 129422790 129423256 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100985.1 MGP_BALBcJ_G0039021.1 mouse_genomes_project 2 142783187 142783325 - Gm26165 snoRNA snoRNA MGP_BALBcJ_T0013664.1 MGP_BALBcJ_G0011761.1 mouse_genomes_project 2 101144572 101144999 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010325.1 MGP_BALBcJ_G0008450.1 mouse_genomes_project 2 7492389 7492487 + Mir669l miRNA miRNA MGP_BALBcJ_T0007314.1 MGP_BALBcJ_G0005993.1 mouse_genomes_project 2 134149285 134155967 - Gm14211 lincRNA lincRNA MGP_BALBcJ_T0007218.1 MGP_BALBcJ_G0005916.1 mouse_genomes_project 2 72699527 72712884 - Gm13652 lincRNA lincRNA MGP_BALBcJ_T0059544.1 MGP_BALBcJ_G0026937.1 mouse_genomes_project 2 172864021 172909380 + MGP_BALBcJ_P0059544 Vapb protein_coding protein_coding MGP_BALBcJ_T0059545.1 MGP_BALBcJ_G0026937.1 mouse_genomes_project 2 172893942 172903168 + Vapb protein_coding processed_transcript MGP_BALBcJ_T0007100.1 MGP_BALBcJ_G0005823.1 mouse_genomes_project 2 809893 824761 + lincRNA lincRNA MGP_BALBcJ_T0057816.1 MGP_BALBcJ_G0026517.1 mouse_genomes_project 2 130714456 130747519 + MGP_BALBcJ_P0057816 Cds2 protein_coding protein_coding MGP_BALBcJ_T0057817.1 MGP_BALBcJ_G0026517.1 mouse_genomes_project 2 130714549 130748597 + MGP_BALBcJ_P0057817 Cds2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057818.1 MGP_BALBcJ_G0026517.1 mouse_genomes_project 2 130714752 130761230 + MGP_BALBcJ_P0057818 Cds2 protein_coding protein_coding MGP_BALBcJ_T0057819.1 MGP_BALBcJ_G0026517.1 mouse_genomes_project 2 130736484 130746899 + MGP_BALBcJ_P0057819 Cds2 protein_coding protein_coding MGP_BALBcJ_T0057820.1 MGP_BALBcJ_G0026517.1 mouse_genomes_project 2 130752621 130756654 + MGP_BALBcJ_P0057820 Cds2 protein_coding protein_coding MGP_BALBcJ_T0058541.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154317628 154351857 - MGP_BALBcJ_P0058541 Gss protein_coding protein_coding MGP_BALBcJ_T0058542.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154317636 154351761 - MGP_BALBcJ_P0058542 Gss protein_coding protein_coding MGP_BALBcJ_T0058543.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154317936 154327437 - MGP_BALBcJ_P0058543 Gss protein_coding protein_coding MGP_BALBcJ_T0058544.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154318658 154328822 - Gss protein_coding retained_intron MGP_BALBcJ_T0058547.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154327397 154340826 - MGP_BALBcJ_P0058547 Gss protein_coding protein_coding MGP_BALBcJ_T0058548.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154331227 154351774 - Gss protein_coding processed_transcript MGP_BALBcJ_T0058549.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154331963 154345747 - Gss protein_coding retained_intron MGP_BALBcJ_T0058550.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154332034 154351614 - MGP_BALBcJ_P0058550 Gss protein_coding protein_coding MGP_BALBcJ_T0058551.1 MGP_BALBcJ_G0026712.1 mouse_genomes_project 2 154332746 154340818 - Gss protein_coding processed_transcript MGP_BALBcJ_T0013497.1 MGP_BALBcJ_G0011594.1 mouse_genomes_project 2 42671384 42671618 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004061.1 MGP_BALBcJ_G0003603.1 mouse_genomes_project 2 127018415 127020849 - Gm14011 antisense antisense MGP_BALBcJ_T0003967.1 MGP_BALBcJ_G0003537.1 mouse_genomes_project 2 59768760 59885534 + Gm13561 antisense antisense MGP_BALBcJ_T0098576.1 MGP_BALBcJ_G0036630.1 mouse_genomes_project 2 116374266 116374360 + Gm22651 rRNA rRNA MGP_BALBcJ_T0055124.1 MGP_BALBcJ_G0025778.1 mouse_genomes_project 2 67285952 67288317 + Klhl23 protein_coding processed_transcript MGP_BALBcJ_T0055125.1 MGP_BALBcJ_G0025778.1 mouse_genomes_project 2 67286378 67300648 + MGP_BALBcJ_P0055125 Klhl23 protein_coding protein_coding MGP_BALBcJ_T0055126.1 MGP_BALBcJ_G0025778.1 mouse_genomes_project 2 67288347 67290238 + Klhl23 protein_coding processed_transcript MGP_BALBcJ_T0102024.1 MGP_BALBcJ_G0039853.1 mouse_genomes_project 2 142982453 142990929 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102025.1 MGP_BALBcJ_G0039853.1 mouse_genomes_project 2 142987529 143024198 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102026.1 MGP_BALBcJ_G0039853.1 mouse_genomes_project 2 142987594 142989860 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0102027.1 MGP_BALBcJ_G0039853.1 mouse_genomes_project 2 142988310 142989867 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0053205.1 MGP_BALBcJ_G0025442.1 mouse_genomes_project 2 22883775 22886306 + MGP_BALBcJ_P0053205 Lcn3 protein_coding protein_coding MGP_BALBcJ_T0013553.1 MGP_BALBcJ_G0011650.1 mouse_genomes_project 2 62305330 62305905 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004011.1 MGP_BALBcJ_G0003568.1 mouse_genomes_project 2 75060605 75078241 + Gm13944 antisense antisense MGP_BALBcJ_T0004012.1 MGP_BALBcJ_G0003568.1 mouse_genomes_project 2 75060613 75078586 + Gm13944 antisense antisense MGP_BALBcJ_T0007411.1 MGP_BALBcJ_G0006076.1 mouse_genomes_project 2 180147049 180159614 + Gm14344 lincRNA lincRNA MGP_BALBcJ_T0013568.1 MGP_BALBcJ_G0011665.1 mouse_genomes_project 2 68113815 68114064 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102428.1 MGP_BALBcJ_G0040244.1 mouse_genomes_project 2 87881956 87882886 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013619.1 MGP_BALBcJ_G0011716.1 mouse_genomes_project 2 84858845 84860307 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017868.1 MGP_BALBcJ_G0015425.1 mouse_genomes_project 2 157420839 157437152 - Gm14204 processed_transcript processed_transcript MGP_BALBcJ_T0017869.1 MGP_BALBcJ_G0015425.1 mouse_genomes_project 2 157423536 157437216 - Gm14204 processed_transcript processed_transcript MGP_BALBcJ_T0017870.1 MGP_BALBcJ_G0015425.1 mouse_genomes_project 2 157428369 157437099 - Gm14204 processed_transcript processed_transcript MGP_BALBcJ_T0017871.1 MGP_BALBcJ_G0015425.1 mouse_genomes_project 2 157428508 157437083 - Gm14204 processed_transcript processed_transcript MGP_BALBcJ_T0059681.1 MGP_BALBcJ_G0026970.1 mouse_genomes_project 2 179805167 179850473 + MGP_BALBcJ_P0059681 Ntsr1 protein_coding protein_coding MGP_BALBcJ_T0059682.1 MGP_BALBcJ_G0026970.1 mouse_genomes_project 2 179805418 179849712 + MGP_BALBcJ_P0059682 Ntsr1 protein_coding protein_coding MGP_BALBcJ_T0013411.1 MGP_BALBcJ_G0011508.1 mouse_genomes_project 2 12205009 12206093 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058470.1 MGP_BALBcJ_G0026699.1 mouse_genomes_project 2 153492819 153493585 - Gm14214 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0058471.1 MGP_BALBcJ_G0026699.1 mouse_genomes_project 2 153492819 153493487 - MGP_BALBcJ_P0058471 Gm14214 protein_coding protein_coding MGP_BALBcJ_T0053682.1 MGP_BALBcJ_G0025523.1 mouse_genomes_project 2 27236835 27254927 - MGP_BALBcJ_P0053682 Wdr34 protein_coding protein_coding MGP_BALBcJ_T0053683.1 MGP_BALBcJ_G0025523.1 mouse_genomes_project 2 27237201 27237795 - Wdr34 protein_coding retained_intron MGP_BALBcJ_T0053684.1 MGP_BALBcJ_G0025523.1 mouse_genomes_project 2 27239083 27240336 - Wdr34 protein_coding retained_intron MGP_BALBcJ_T0053685.1 MGP_BALBcJ_G0025523.1 mouse_genomes_project 2 27253222 27254907 - Wdr34 protein_coding processed_transcript MGP_BALBcJ_T0003953.1 MGP_BALBcJ_G0003528.1 mouse_genomes_project 2 36306027 36307573 - Gm13496 antisense antisense MGP_BALBcJ_T0013661.1 MGP_BALBcJ_G0011758.1 mouse_genomes_project 2 99472830 99473041 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056574.1 MGP_BALBcJ_G0026212.1 mouse_genomes_project 2 107843001 107947927 + MGP_BALBcJ_P0056574 Lgr4 protein_coding protein_coding MGP_BALBcJ_T0056575.1 MGP_BALBcJ_G0026212.1 mouse_genomes_project 2 107843001 107947927 + MGP_BALBcJ_P0056575 Lgr4 protein_coding protein_coding MGP_BALBcJ_T0056576.1 MGP_BALBcJ_G0026212.1 mouse_genomes_project 2 107909414 107931547 + Lgr4 protein_coding processed_transcript MGP_BALBcJ_T0056577.1 MGP_BALBcJ_G0026212.1 mouse_genomes_project 2 107934212 107935145 + Lgr4 protein_coding retained_intron MGP_BALBcJ_T0059918.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051711 181057681 + MGP_BALBcJ_P0059918 Oprl1 protein_coding protein_coding MGP_BALBcJ_T0059919.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051737 181057671 + MGP_BALBcJ_P0059919 Oprl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059920.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051741 181055286 + MGP_BALBcJ_P0059920 Oprl1 protein_coding protein_coding MGP_BALBcJ_T0059921.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051762 181057670 + MGP_BALBcJ_P0059921 Oprl1 protein_coding protein_coding MGP_BALBcJ_T0059922.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051778 181057668 + MGP_BALBcJ_P0059922 Oprl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059923.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051789 181057670 + Oprl1 protein_coding processed_transcript MGP_BALBcJ_T0059924.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181051796 181053074 + Oprl1 protein_coding processed_transcript MGP_BALBcJ_T0059925.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181052043 181057668 + MGP_BALBcJ_P0059925 Oprl1 protein_coding protein_coding MGP_BALBcJ_T0059926.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181052288 181056047 + MGP_BALBcJ_P0059926 Oprl1 protein_coding protein_coding MGP_BALBcJ_T0059927.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181052397 181056068 + MGP_BALBcJ_P0059927 Oprl1 protein_coding protein_coding MGP_BALBcJ_T0059928.1 MGP_BALBcJ_G0027010.1 mouse_genomes_project 2 181052398 181056068 + MGP_BALBcJ_P0059928 Oprl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052406.1 MGP_BALBcJ_G0025303.1 mouse_genomes_project 2 3167738 3191422 - MGP_BALBcJ_P0052406 Echdc3 protein_coding protein_coding MGP_BALBcJ_T0052407.1 MGP_BALBcJ_G0025303.1 mouse_genomes_project 2 3168782 3175476 - Echdc3 protein_coding processed_transcript MGP_BALBcJ_T0052408.1 MGP_BALBcJ_G0025303.1 mouse_genomes_project 2 3184399 3191368 - Echdc3 protein_coding retained_intron MGP_BALBcJ_T0017751.1 MGP_BALBcJ_G0015368.1 mouse_genomes_project 2 72251877 72262135 + Gm28309 processed_transcript processed_transcript MGP_BALBcJ_T0007206.1 MGP_BALBcJ_G0005906.1 mouse_genomes_project 2 71031220 71049105 + Gm13708 lincRNA lincRNA MGP_BALBcJ_T0102384.1 MGP_BALBcJ_G0040200.1 mouse_genomes_project 2 21319639 21321628 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0053502.1 MGP_BALBcJ_G0025495.1 mouse_genomes_project 2 25646383 25649496 + MGP_BALBcJ_P0053502 Mrps2 protein_coding protein_coding MGP_BALBcJ_T0053503.1 MGP_BALBcJ_G0025495.1 mouse_genomes_project 2 25646399 25649483 + Mrps2 protein_coding processed_transcript MGP_BALBcJ_T0053504.1 MGP_BALBcJ_G0025495.1 mouse_genomes_project 2 25646407 25649483 + Mrps2 protein_coding processed_transcript MGP_BALBcJ_T0055521.1 MGP_BALBcJ_G0025857.1 mouse_genomes_project 2 78003179 78039013 - MGP_BALBcJ_P0055521 Frzb protein_coding protein_coding MGP_BALBcJ_T0055522.1 MGP_BALBcJ_G0025857.1 mouse_genomes_project 2 78004322 78030039 - Frzb protein_coding processed_transcript MGP_BALBcJ_T0052851.1 MGP_BALBcJ_G0025377.1 mouse_genomes_project 2 21266838 21277242 + MGP_BALBcJ_P0052851 Il1f6 protein_coding protein_coding MGP_BALBcJ_T0052852.1 MGP_BALBcJ_G0025377.1 mouse_genomes_project 2 21266925 21277065 + Il1f6 protein_coding processed_transcript MGP_BALBcJ_T0017769.1 MGP_BALBcJ_G0015381.1 mouse_genomes_project 2 88815659 88826305 - Gm13778 processed_transcript processed_transcript MGP_BALBcJ_T0017770.1 MGP_BALBcJ_G0015381.1 mouse_genomes_project 2 88815962 88826320 - Gm13778 processed_transcript processed_transcript MGP_BALBcJ_T0056637.1 MGP_BALBcJ_G0026257.1 mouse_genomes_project 2 110164546 110165166 + MGP_BALBcJ_P0056637 protein_coding protein_coding MGP_BALBcJ_T0102402.1 MGP_BALBcJ_G0040218.1 mouse_genomes_project 2 83192783 83193509 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058104.1 MGP_BALBcJ_G0026584.1 mouse_genomes_project 2 146986216 146993096 - MGP_BALBcJ_P0058104 Cd93 protein_coding protein_coding MGP_BALBcJ_T0004101.1 MGP_BALBcJ_G0003629.1 mouse_genomes_project 2 144771019 144778900 + A930019D19Rik antisense antisense MGP_BALBcJ_T0013429.1 MGP_BALBcJ_G0011526.1 mouse_genomes_project 2 16600381 16600609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010338.1 MGP_BALBcJ_G0008463.1 mouse_genomes_project 2 7514602 7514699 + Mir669a-2 miRNA miRNA MGP_BALBcJ_T0007225.1 MGP_BALBcJ_G0005923.1 mouse_genomes_project 2 75640651 75660884 + lincRNA lincRNA MGP_BALBcJ_T0007226.1 MGP_BALBcJ_G0005923.1 mouse_genomes_project 2 75640697 75781068 + lincRNA lincRNA MGP_BALBcJ_T0052994.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22317936 22323462 - MGP_BALBcJ_P0052994 Slc34a3 protein_coding protein_coding MGP_BALBcJ_T0052995.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22319820 22322104 - Slc34a3 protein_coding processed_transcript MGP_BALBcJ_T0052996.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22321002 22323316 - Slc34a3 protein_coding processed_transcript MGP_BALBcJ_T0052997.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22321043 22323309 - Slc34a3 protein_coding processed_transcript MGP_BALBcJ_T0052998.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22321048 22322766 - Slc34a3 protein_coding processed_transcript MGP_BALBcJ_T0052999.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22321319 22323332 - Slc34a3 protein_coding processed_transcript MGP_BALBcJ_T0053000.1 MGP_BALBcJ_G0025400.1 mouse_genomes_project 2 22321483 22323286 - Slc34a3 protein_coding processed_transcript MGP_BALBcJ_T0055756.1 MGP_BALBcJ_G0025969.1 mouse_genomes_project 2 84783197 84784136 - MGP_BALBcJ_P0055756 Olfr1110 protein_coding protein_coding MGP_BALBcJ_T0011474.1 MGP_BALBcJ_G0009599.1 mouse_genomes_project 2 42446605 42446736 + Gm27761 misc_RNA misc_RNA MGP_BALBcJ_T0017734.1 MGP_BALBcJ_G0015356.1 mouse_genomes_project 2 47754277 47823338 + Gm13483 processed_transcript processed_transcript MGP_BALBcJ_T0017735.1 MGP_BALBcJ_G0015356.1 mouse_genomes_project 2 47754331 47892246 + Gm13483 processed_transcript processed_transcript MGP_BALBcJ_T0010363.1 MGP_BALBcJ_G0008488.1 mouse_genomes_project 2 19670359 19670454 + Gm23636 miRNA miRNA MGP_BALBcJ_T0101670.1 MGP_BALBcJ_G0039662.1 mouse_genomes_project 2 103495594 103495984 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0013831.1 MGP_BALBcJ_G0011928.1 mouse_genomes_project 2 160109983 160114567 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007339.1 MGP_BALBcJ_G0006014.1 mouse_genomes_project 2 153444950 153446250 - Gm14216 lincRNA lincRNA MGP_BALBcJ_T0007340.1 MGP_BALBcJ_G0006014.1 mouse_genomes_project 2 153444968 153461246 - Gm14216 lincRNA lincRNA MGP_BALBcJ_T0013798.1 MGP_BALBcJ_G0011895.1 mouse_genomes_project 2 150945625 150946393 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001069.1 MGP_BALBcJ_G0000997.1 mouse_genomes_project 2 36152616 36154576 - TEC TEC MGP_BALBcJ_T0003868.1 MGP_BALBcJ_G0003463.1 mouse_genomes_project 2 1078710 1088028 - 1700080N15Rik antisense antisense MGP_BALBcJ_T0003869.1 MGP_BALBcJ_G0003463.1 mouse_genomes_project 2 1078712 1088028 - 1700080N15Rik antisense antisense MGP_BALBcJ_T0003870.1 MGP_BALBcJ_G0003463.1 mouse_genomes_project 2 1082511 1088026 - 1700080N15Rik antisense antisense MGP_BALBcJ_T0013565.1 MGP_BALBcJ_G0011662.1 mouse_genomes_project 2 67198112 67198545 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055883.1 MGP_BALBcJ_G0026075.1 mouse_genomes_project 2 87375831 87376776 - MGP_BALBcJ_P0055883 Olfr1246 protein_coding protein_coding MGP_BALBcJ_T0004067.1 MGP_BALBcJ_G0003606.1 mouse_genomes_project 2 127519126 127540942 + Gm14024 antisense antisense MGP_BALBcJ_T0017760.1 MGP_BALBcJ_G0015377.1 mouse_genomes_project 2 86407430 86411312 + Gm13759 processed_transcript processed_transcript MGP_BALBcJ_T0058354.1 MGP_BALBcJ_G0026665.1 mouse_genomes_project 2 151841682 151856102 - MGP_BALBcJ_P0058354 Plagl2 protein_coding protein_coding MGP_BALBcJ_T0058355.1 MGP_BALBcJ_G0026665.1 mouse_genomes_project 2 151841695 151851813 - MGP_BALBcJ_P0058355 Plagl2 protein_coding protein_coding MGP_BALBcJ_T0098860.1 MGP_BALBcJ_G0036908.1 mouse_genomes_project 2 1037836 1041186 + Gm10862 sense_intronic sense_intronic MGP_BALBcJ_T0056613.1 MGP_BALBcJ_G0026233.1 mouse_genomes_project 2 109346809 109348199 + MGP_BALBcJ_P0056613 protein_coding protein_coding MGP_BALBcJ_T0001037.1 MGP_BALBcJ_G0000965.1 mouse_genomes_project 2 11086825 11090789 - TEC TEC MGP_BALBcJ_T0003951.1 MGP_BALBcJ_G0003527.1 mouse_genomes_project 2 36121950 36137616 + Nr6a1os antisense antisense MGP_BALBcJ_T0003952.1 MGP_BALBcJ_G0003527.1 mouse_genomes_project 2 36122024 36152009 + Nr6a1os antisense antisense MGP_BALBcJ_T0010455.1 MGP_BALBcJ_G0008580.1 mouse_genomes_project 2 157066530 157066592 - Mir7685 miRNA miRNA MGP_BALBcJ_T0057742.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129640142 129644538 + Ap5s1 protein_coding processed_transcript MGP_BALBcJ_T0057743.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129640150 129646298 + MGP_BALBcJ_P0057743 Ap5s1 protein_coding protein_coding MGP_BALBcJ_T0057744.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129643460 129646564 + Ap5s1 protein_coding processed_transcript MGP_BALBcJ_T0057745.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129643487 129646156 + Ap5s1 protein_coding processed_transcript MGP_BALBcJ_T0057746.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129643514 129647073 + MGP_BALBcJ_P0057746 Ap5s1 protein_coding protein_coding MGP_BALBcJ_T0057747.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129643530 129647076 + MGP_BALBcJ_P0057747 Ap5s1 protein_coding protein_coding MGP_BALBcJ_T0057748.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129643530 129647076 + MGP_BALBcJ_P0057748 Ap5s1 protein_coding protein_coding MGP_BALBcJ_T0057749.1 MGP_BALBcJ_G0026503.1 mouse_genomes_project 2 129643694 129646426 + MGP_BALBcJ_P0057749 Ap5s1 protein_coding protein_coding MGP_BALBcJ_T0003945.1 MGP_BALBcJ_G0003521.1 mouse_genomes_project 2 32293295 32313338 + Gm13449 antisense antisense MGP_BALBcJ_T0013639.1 MGP_BALBcJ_G0011736.1 mouse_genomes_project 2 89445306 89445544 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055800.1 MGP_BALBcJ_G0026003.1 mouse_genomes_project 2 85583492 85586256 + MGP_BALBcJ_P0055800 Olfr1151 protein_coding protein_coding MGP_BALBcJ_T0059459.1 MGP_BALBcJ_G0026908.1 mouse_genomes_project 2 168667057 168950255 + MGP_BALBcJ_P0059459 Tshz2 protein_coding protein_coding MGP_BALBcJ_T0059460.1 MGP_BALBcJ_G0026908.1 mouse_genomes_project 2 168667714 168925110 + MGP_BALBcJ_P0059460 Tshz2 protein_coding protein_coding MGP_BALBcJ_T0059461.1 MGP_BALBcJ_G0026908.1 mouse_genomes_project 2 168921498 169111195 + MGP_BALBcJ_P0059461 Tshz2 protein_coding protein_coding MGP_BALBcJ_T0059462.1 MGP_BALBcJ_G0026908.1 mouse_genomes_project 2 168921498 169111195 + MGP_BALBcJ_P0059462 Tshz2 protein_coding protein_coding MGP_BALBcJ_T0059463.1 MGP_BALBcJ_G0026908.1 mouse_genomes_project 2 168922440 168950255 + MGP_BALBcJ_P0059463 Tshz2 protein_coding protein_coding MGP_BALBcJ_T0056105.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89453444 89475986 + MGP_BALBcJ_P0056105 Arhgap1 protein_coding protein_coding MGP_BALBcJ_T0056106.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89453702 89475986 + MGP_BALBcJ_P0056106 Arhgap1 protein_coding protein_coding MGP_BALBcJ_T0056107.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89453806 89475986 + MGP_BALBcJ_P0056107 Arhgap1 protein_coding protein_coding MGP_BALBcJ_T0056108.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89455082 89458115 + Arhgap1 protein_coding processed_transcript MGP_BALBcJ_T0056109.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89455082 89458117 + Arhgap1 protein_coding processed_transcript MGP_BALBcJ_T0056110.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89455331 89471968 + Arhgap1 protein_coding processed_transcript MGP_BALBcJ_T0056111.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89456792 89475962 + MGP_BALBcJ_P0056111 Arhgap1 protein_coding protein_coding MGP_BALBcJ_T0056112.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89472175 89475021 + Arhgap1 protein_coding processed_transcript MGP_BALBcJ_T0056113.1 MGP_BALBcJ_G0026124.1 mouse_genomes_project 2 89473590 89474707 + Arhgap1 protein_coding processed_transcript MGP_BALBcJ_T0059782.1 MGP_BALBcJ_G0026989.1 mouse_genomes_project 2 180521854 180529475 - MGP_BALBcJ_P0059782 Srms protein_coding protein_coding MGP_BALBcJ_T0007162.1 MGP_BALBcJ_G0005870.1 mouse_genomes_project 2 32814819 32817379 + Gm35202 lincRNA lincRNA MGP_BALBcJ_T0058879.1 MGP_BALBcJ_G0026768.1 mouse_genomes_project 2 157195555 157206404 + MGP_BALBcJ_P0058879 Snhg11 protein_coding protein_coding MGP_BALBcJ_T0058880.1 MGP_BALBcJ_G0026768.1 mouse_genomes_project 2 157195578 157197124 + Snhg11 protein_coding retained_intron MGP_BALBcJ_T0058881.1 MGP_BALBcJ_G0026768.1 mouse_genomes_project 2 157195615 157201507 + MGP_BALBcJ_P0058881 Snhg11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058882.1 MGP_BALBcJ_G0026768.1 mouse_genomes_project 2 157195632 157198980 + Snhg11 protein_coding retained_intron MGP_BALBcJ_T0058883.1 MGP_BALBcJ_G0026768.1 mouse_genomes_project 2 157195642 157200980 + MGP_BALBcJ_P0058883 Snhg11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059533.1 MGP_BALBcJ_G0026932.1 mouse_genomes_project 2 172338959 172391271 - MGP_BALBcJ_P0059533 Pmepa1 protein_coding protein_coding MGP_BALBcJ_T0059534.1 MGP_BALBcJ_G0026932.1 mouse_genomes_project 2 172342547 172390927 - MGP_BALBcJ_P0059534 Pmepa1 protein_coding protein_coding MGP_BALBcJ_T0059535.1 MGP_BALBcJ_G0026932.1 mouse_genomes_project 2 172342712 172349230 - Pmepa1 protein_coding retained_intron MGP_BALBcJ_T0013598.1 MGP_BALBcJ_G0011695.1 mouse_genomes_project 2 78140114 78140799 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010359.1 MGP_BALBcJ_G0008484.1 mouse_genomes_project 2 14625641 14625754 + Mir6419 miRNA miRNA MGP_BALBcJ_T0011490.1 MGP_BALBcJ_G0009615.1 mouse_genomes_project 2 114969077 114969390 + Gm24914 misc_RNA misc_RNA MGP_BALBcJ_T0054999.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63070989 63216774 + MGP_BALBcJ_P0054999 Scn2a1 protein_coding protein_coding MGP_BALBcJ_T0055000.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63070989 63140186 + MGP_BALBcJ_P0055000 Scn2a1 protein_coding protein_coding MGP_BALBcJ_T0055001.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63071029 63073483 + Scn2a1 protein_coding retained_intron MGP_BALBcJ_T0055002.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63118710 63121808 + Scn2a1 protein_coding retained_intron MGP_BALBcJ_T0055003.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63118789 63214382 + MGP_BALBcJ_P0055003 Scn2a1 protein_coding protein_coding MGP_BALBcJ_T0055004.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63120455 63216774 + MGP_BALBcJ_P0055004 Scn2a1 protein_coding protein_coding MGP_BALBcJ_T0055005.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63132290 63133877 + Scn2a1 protein_coding retained_intron MGP_BALBcJ_T0055006.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63166697 63177586 + MGP_BALBcJ_P0055006 Scn2a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055007.1 MGP_BALBcJ_G0025751.1 mouse_genomes_project 2 63166720 63177537 + MGP_BALBcJ_P0055007 Scn2a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057593.1 MGP_BALBcJ_G0026470.1 mouse_genomes_project 2 128500813 128543766 + Tgm6 protein_coding processed_transcript MGP_BALBcJ_T0057594.1 MGP_BALBcJ_G0026470.1 mouse_genomes_project 2 128511559 128543766 + Tgm6 protein_coding processed_transcript MGP_BALBcJ_T0057595.1 MGP_BALBcJ_G0026470.1 mouse_genomes_project 2 128511559 128543766 + MGP_BALBcJ_P0057595 Tgm6 protein_coding protein_coding MGP_BALBcJ_T0057185.1 MGP_BALBcJ_G0026367.1 mouse_genomes_project 2 119486884 119504024 - MGP_BALBcJ_P0057185 Serinc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057193.1 MGP_BALBcJ_G0026367.1 mouse_genomes_project 2 119499443 119504887 - MGP_BALBcJ_P0057193 Serinc4 protein_coding protein_coding MGP_BALBcJ_T0057194.1 MGP_BALBcJ_G0026367.1 mouse_genomes_project 2 119499443 119504975 - MGP_BALBcJ_P0057194 Serinc4 protein_coding protein_coding MGP_BALBcJ_T0057195.1 MGP_BALBcJ_G0026367.1 mouse_genomes_project 2 119499455 119504024 - MGP_BALBcJ_P0057195 Serinc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057196.1 MGP_BALBcJ_G0026367.1 mouse_genomes_project 2 119499513 119504018 - MGP_BALBcJ_P0057196 Serinc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057197.1 MGP_BALBcJ_G0026367.1 mouse_genomes_project 2 119500421 119502013 - Serinc4 protein_coding retained_intron MGP_BALBcJ_T0058456.1 MGP_BALBcJ_G0026693.1 mouse_genomes_project 2 153249374 153250875 + MGP_BALBcJ_P0058456 Actl10 protein_coding protein_coding MGP_BALBcJ_T0001083.1 MGP_BALBcJ_G0001011.1 mouse_genomes_project 2 72921871 72922466 - TEC TEC MGP_BALBcJ_T0054449.1 MGP_BALBcJ_G0025646.1 mouse_genomes_project 2 34017184 34018123 + MGP_BALBcJ_P0054449 Olfr347 protein_coding protein_coding MGP_BALBcJ_T0007351.1 MGP_BALBcJ_G0006023.1 mouse_genomes_project 2 158753555 158785086 - Gm14223 lincRNA lincRNA MGP_BALBcJ_T0007356.1 MGP_BALBcJ_G0006028.1 mouse_genomes_project 2 160198269 160199209 + Gm14241 lincRNA lincRNA MGP_BALBcJ_T0058925.1 MGP_BALBcJ_G0026778.1 mouse_genomes_project 2 159209014 159212367 - MGP_BALBcJ_P0058925 Mafb protein_coding protein_coding MGP_BALBcJ_T0057037.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118686595 118737514 + MGP_BALBcJ_P0057037 protein_coding protein_coding MGP_BALBcJ_T0057038.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118686693 118773440 + MGP_BALBcJ_P0057038 protein_coding protein_coding MGP_BALBcJ_T0057039.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118686693 118772018 + MGP_BALBcJ_P0057039 protein_coding unknown_likely_coding MGP_BALBcJ_T0057040.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118739480 118773440 + MGP_BALBcJ_P0057040 protein_coding protein_coding MGP_BALBcJ_T0057041.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118756440 118773190 + MGP_BALBcJ_P0057041 protein_coding protein_coding MGP_BALBcJ_T0057042.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118759691 118789441 + MGP_BALBcJ_P0057042 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057043.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118771071 118773238 + protein_coding retained_intron MGP_BALBcJ_T0057044.1 MGP_BALBcJ_G0026346.1 mouse_genomes_project 2 118772625 118786911 + protein_coding processed_transcript MGP_BALBcJ_T0003963.1 MGP_BALBcJ_G0003535.1 mouse_genomes_project 2 57807731 57808786 + Gm13580 antisense antisense MGP_BALBcJ_T0013551.1 MGP_BALBcJ_G0011648.1 mouse_genomes_project 2 60094043 60095631 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053200.1 MGP_BALBcJ_G0025438.1 mouse_genomes_project 2 22792136 22795492 + MGP_BALBcJ_P0053200 Lcn10 protein_coding protein_coding MGP_BALBcJ_T0013694.1 MGP_BALBcJ_G0011791.1 mouse_genomes_project 2 109678168 109679102 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055055.1 MGP_BALBcJ_G0025763.1 mouse_genomes_project 2 66037410 66073214 + MGP_BALBcJ_P0055055 4933409G03Rik protein_coding protein_coding MGP_BALBcJ_T0055056.1 MGP_BALBcJ_G0025763.1 mouse_genomes_project 2 66045465 66071532 + MGP_BALBcJ_P0055056 4933409G03Rik protein_coding protein_coding MGP_BALBcJ_T0058585.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154609285 154692894 - Uqcc1 protein_coding processed_transcript MGP_BALBcJ_T0058586.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154609285 154692894 - MGP_BALBcJ_P0058586 Uqcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058587.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154609287 154692877 - MGP_BALBcJ_P0058587 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058588.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154609287 154692870 - MGP_BALBcJ_P0058588 Uqcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058589.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154609312 154693144 - MGP_BALBcJ_P0058589 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058590.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154610328 154692852 - MGP_BALBcJ_P0058590 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058591.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154610565 154614113 - Uqcc1 protein_coding processed_transcript MGP_BALBcJ_T0058592.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154610622 154692878 - MGP_BALBcJ_P0058592 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058593.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154610641 154693144 - MGP_BALBcJ_P0058593 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058594.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154610832 154692866 - MGP_BALBcJ_P0058594 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058595.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154613323 154693097 - Uqcc1 protein_coding retained_intron MGP_BALBcJ_T0058596.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154613787 154692877 - MGP_BALBcJ_P0058596 Uqcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058597.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154620457 154692884 - Uqcc1 protein_coding retained_intron MGP_BALBcJ_T0058598.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154633634 154692890 - Uqcc1 protein_coding processed_transcript MGP_BALBcJ_T0058599.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154649968 154692894 - MGP_BALBcJ_P0058599 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0058600.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154649980 154673940 - Uqcc1 protein_coding retained_intron MGP_BALBcJ_T0058601.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154649987 154693110 - Uqcc1 protein_coding processed_transcript MGP_BALBcJ_T0058602.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154671304 154692880 - Uqcc1 protein_coding retained_intron MGP_BALBcJ_T0058603.1 MGP_BALBcJ_G0026722.1 mouse_genomes_project 2 154672699 154692884 - MGP_BALBcJ_P0058603 Uqcc1 protein_coding protein_coding MGP_BALBcJ_T0055852.1 MGP_BALBcJ_G0026051.1 mouse_genomes_project 2 86829173 86830088 - MGP_BALBcJ_P0055852 Olfr1217 protein_coding protein_coding MGP_BALBcJ_T0017725.1 MGP_BALBcJ_G0015351.1 mouse_genomes_project 2 29310423 29324972 - Gm16534 processed_transcript processed_transcript MGP_BALBcJ_T0017726.1 MGP_BALBcJ_G0015351.1 mouse_genomes_project 2 29311218 29325719 - Gm16534 processed_transcript processed_transcript MGP_BALBcJ_T0013549.1 MGP_BALBcJ_G0011646.1 mouse_genomes_project 2 59123040 59123739 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003939.1 MGP_BALBcJ_G0003518.1 mouse_genomes_project 2 30928492 30929893 + C130021I20Rik antisense antisense MGP_BALBcJ_T0003940.1 MGP_BALBcJ_G0003518.1 mouse_genomes_project 2 30928630 30933654 + C130021I20Rik antisense antisense MGP_BALBcJ_T0056423.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101884875 101908465 + MGP_BALBcJ_P0056423 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056424.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101884884 101909293 + MGP_BALBcJ_P0056424 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056426.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101896935 101908507 + MGP_BALBcJ_P0056426 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056427.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101897548 101909270 + MGP_BALBcJ_P0056427 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056428.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101897560 101903559 + MGP_BALBcJ_P0056428 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056429.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101897642 101909289 + MGP_BALBcJ_P0056429 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056430.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101897663 101909254 + MGP_BALBcJ_P0056430 Lmo2 protein_coding protein_coding MGP_BALBcJ_T0056431.1 MGP_BALBcJ_G0026178.1 mouse_genomes_project 2 101898598 101908331 + Lmo2 protein_coding processed_transcript MGP_BALBcJ_T0056643.1 MGP_BALBcJ_G0026260.1 mouse_genomes_project 2 110274026 110275372 + MGP_BALBcJ_P0056643 Nop10 protein_coding protein_coding MGP_BALBcJ_T0013557.1 MGP_BALBcJ_G0011654.1 mouse_genomes_project 2 63899494 63899866 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017709.1 MGP_BALBcJ_G0015341.1 mouse_genomes_project 2 23572634 23587793 + 0610009E02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017710.1 MGP_BALBcJ_G0015341.1 mouse_genomes_project 2 23572862 23586409 + 0610009E02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017711.1 MGP_BALBcJ_G0015341.1 mouse_genomes_project 2 23572880 23587804 + 0610009E02Rik processed_transcript processed_transcript MGP_BALBcJ_T0053419.1 MGP_BALBcJ_G0025478.1 mouse_genomes_project 2 24119946 24145129 + MGP_BALBcJ_P0053419 Adamts13 protein_coding protein_coding MGP_BALBcJ_T0053420.1 MGP_BALBcJ_G0025478.1 mouse_genomes_project 2 24120023 24153659 + MGP_BALBcJ_P0053420 Adamts13 protein_coding protein_coding MGP_BALBcJ_T0053421.1 MGP_BALBcJ_G0025478.1 mouse_genomes_project 2 24150643 24153476 + Adamts13 protein_coding processed_transcript MGP_BALBcJ_T0053738.1 MGP_BALBcJ_G0025533.1 mouse_genomes_project 2 27446042 27472113 + MGP_BALBcJ_P0053738 Gm28035 protein_coding protein_coding MGP_BALBcJ_T0053739.1 MGP_BALBcJ_G0025533.1 mouse_genomes_project 2 27446049 27472118 + MGP_BALBcJ_P0053739 Gm28035 protein_coding protein_coding MGP_BALBcJ_T0057008.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118564019 118618266 - MGP_BALBcJ_P0057008 Zfp106 protein_coding protein_coding MGP_BALBcJ_T0057009.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118566189 118596204 - MGP_BALBcJ_P0057009 Zfp106 protein_coding protein_coding MGP_BALBcJ_T0057010.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118566916 118569452 - Zfp106 protein_coding retained_intron MGP_BALBcJ_T0057011.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118575439 118577135 - Zfp106 protein_coding retained_intron MGP_BALBcJ_T0057012.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118579300 118581225 - MGP_BALBcJ_P0057012 Zfp106 protein_coding protein_coding MGP_BALBcJ_T0057013.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118582868 118618273 - Zfp106 protein_coding retained_intron MGP_BALBcJ_T0057014.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118583332 118585117 - Zfp106 protein_coding retained_intron MGP_BALBcJ_T0057015.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118584941 118588664 - MGP_BALBcJ_P0057015 Zfp106 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057016.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118588491 118618302 - MGP_BALBcJ_P0057016 Zfp106 protein_coding protein_coding MGP_BALBcJ_T0057017.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118591876 118609504 - MGP_BALBcJ_P0057017 Zfp106 protein_coding protein_coding MGP_BALBcJ_T0057018.1 MGP_BALBcJ_G0026342.1 mouse_genomes_project 2 118592009 118618293 - Zfp106 protein_coding processed_transcript MGP_BALBcJ_T0053532.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814776 25846671 + MGP_BALBcJ_P0053532 Tsc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053533.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814785 25865303 + MGP_BALBcJ_P0053533 Tsc1 protein_coding protein_coding MGP_BALBcJ_T0053534.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814789 25862684 + MGP_BALBcJ_P0053534 Tsc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053535.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814789 25865303 + MGP_BALBcJ_P0053535 Tsc1 protein_coding protein_coding MGP_BALBcJ_T0053536.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814791 25865303 + MGP_BALBcJ_P0053536 Tsc1 protein_coding protein_coding MGP_BALBcJ_T0053537.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814798 25847917 + Tsc1 protein_coding retained_intron MGP_BALBcJ_T0053538.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25814802 25841847 + Tsc1 protein_coding retained_intron MGP_BALBcJ_T0053539.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25832459 25865303 + MGP_BALBcJ_P0053539 Tsc1 protein_coding protein_coding MGP_BALBcJ_T0053540.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25837279 25839853 + Tsc1 protein_coding retained_intron MGP_BALBcJ_T0053541.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25844902 25847351 + Tsc1 protein_coding retained_intron MGP_BALBcJ_T0053542.1 MGP_BALBcJ_G0025502.1 mouse_genomes_project 2 25846441 25847493 + Tsc1 protein_coding retained_intron MGP_BALBcJ_T0011488.1 MGP_BALBcJ_G0009613.1 mouse_genomes_project 2 103072634 103072867 - Gm27308 misc_RNA misc_RNA MGP_BALBcJ_T0055273.1 MGP_BALBcJ_G0025804.1 mouse_genomes_project 2 70532456 70548433 - MGP_BALBcJ_P0055273 Gm11084 protein_coding protein_coding MGP_BALBcJ_T0100945.1 MGP_BALBcJ_G0038981.1 mouse_genomes_project 2 43698181 43698304 + Gm23072 snoRNA snoRNA MGP_BALBcJ_T0010466.1 MGP_BALBcJ_G0008591.1 mouse_genomes_project 2 168087655 168087776 + Gm26469 miRNA miRNA MGP_BALBcJ_T0007154.1 MGP_BALBcJ_G0005864.1 mouse_genomes_project 2 31004292 31006825 - 9430024E24Rik lincRNA lincRNA MGP_BALBcJ_T0010358.1 MGP_BALBcJ_G0008483.1 mouse_genomes_project 2 14024089 14024199 - Gm24933 miRNA miRNA MGP_BALBcJ_T0013810.1 MGP_BALBcJ_G0011907.1 mouse_genomes_project 2 154296718 154297009 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059495.1 MGP_BALBcJ_G0026921.1 mouse_genomes_project 2 171526607 171563314 + MGP_BALBcJ_P0059495 Rtfdc1 protein_coding protein_coding MGP_BALBcJ_T0059496.1 MGP_BALBcJ_G0026921.1 mouse_genomes_project 2 171526653 171553516 + Rtfdc1 protein_coding retained_intron MGP_BALBcJ_T0059499.1 MGP_BALBcJ_G0026921.1 mouse_genomes_project 2 171539028 171563314 + Rtfdc1 protein_coding processed_transcript MGP_BALBcJ_T0058278.1 MGP_BALBcJ_G0026644.1 mouse_genomes_project 2 151175855 151180014 - MGP_BALBcJ_P0058278 Defb19 protein_coding protein_coding MGP_BALBcJ_T0055473.1 MGP_BALBcJ_G0025847.1 mouse_genomes_project 2 76089832 76090828 - MGP_BALBcJ_P0055473 Rpl10l protein_coding protein_coding MGP_BALBcJ_T0099692.1 MGP_BALBcJ_G0037728.1 mouse_genomes_project 2 115265001 115265165 + Gm25189 snRNA snRNA MGP_BALBcJ_T0003875.1 MGP_BALBcJ_G0003467.1 mouse_genomes_project 2 2866633 2871237 + Gm13267 antisense antisense MGP_BALBcJ_T0003876.1 MGP_BALBcJ_G0003467.1 mouse_genomes_project 2 2866723 2870010 + Gm13267 antisense antisense MGP_BALBcJ_T0055831.1 MGP_BALBcJ_G0026032.1 mouse_genomes_project 2 86497902 86498829 - MGP_BALBcJ_P0055831 Olfr1195 protein_coding protein_coding MGP_BALBcJ_T0052530.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8772801 8773880 - Fbxo18 protein_coding processed_transcript MGP_BALBcJ_T0052531.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8772803 8808259 - MGP_BALBcJ_P0052531 Fbxo18 protein_coding protein_coding MGP_BALBcJ_T0052532.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8773895 8779135 - Fbxo18 protein_coding retained_intron MGP_BALBcJ_T0052533.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8777755 8808184 - Fbxo18 protein_coding retained_intron MGP_BALBcJ_T0052534.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8778342 8788257 - MGP_BALBcJ_P0052534 Fbxo18 protein_coding protein_coding MGP_BALBcJ_T0052535.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8779360 8781672 - Fbxo18 protein_coding retained_intron MGP_BALBcJ_T0052536.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8781581 8789174 - Fbxo18 protein_coding retained_intron MGP_BALBcJ_T0052537.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8793632 8808227 - Fbxo18 protein_coding processed_transcript MGP_BALBcJ_T0052538.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8794925 8808225 - Fbxo18 protein_coding processed_transcript MGP_BALBcJ_T0052539.1 MGP_BALBcJ_G0025321.1 mouse_genomes_project 2 8798195 8808184 - Fbxo18 protein_coding processed_transcript MGP_BALBcJ_T0058956.1 MGP_BALBcJ_G0026784.1 mouse_genomes_project 2 159747424 159753305 - MGP_BALBcJ_P0058956 Emilin3 protein_coding protein_coding MGP_BALBcJ_T0058957.1 MGP_BALBcJ_G0026784.1 mouse_genomes_project 2 159747425 159753316 - MGP_BALBcJ_P0058957 Emilin3 protein_coding protein_coding MGP_BALBcJ_T0003919.1 MGP_BALBcJ_G0003500.1 mouse_genomes_project 2 24472926 24477520 + AA645442 antisense antisense MGP_BALBcJ_T0007224.1 MGP_BALBcJ_G0005922.1 mouse_genomes_project 2 75442309 75444612 + Gm13661 lincRNA lincRNA MGP_BALBcJ_T0013584.1 MGP_BALBcJ_G0011681.1 mouse_genomes_project 2 73212328 73213073 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056477.1 MGP_BALBcJ_G0026192.1 mouse_genomes_project 2 102696764 102759426 - MGP_BALBcJ_P0056477 Qser1 protein_coding protein_coding MGP_BALBcJ_T0017811.1 MGP_BALBcJ_G0015401.1 mouse_genomes_project 2 118894056 118909220 + AV039307 processed_transcript processed_transcript MGP_BALBcJ_T0017812.1 MGP_BALBcJ_G0015401.1 mouse_genomes_project 2 118894068 118909354 + AV039307 processed_transcript processed_transcript MGP_BALBcJ_T0017813.1 MGP_BALBcJ_G0015401.1 mouse_genomes_project 2 118908897 118909221 + AV039307 processed_transcript processed_transcript MGP_BALBcJ_T0010349.1 MGP_BALBcJ_G0008474.1 mouse_genomes_project 2 7518998 7519078 + Mir466g miRNA miRNA MGP_BALBcJ_T0013800.1 MGP_BALBcJ_G0011897.1 mouse_genomes_project 2 151064302 151064785 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055038.1 MGP_BALBcJ_G0025757.1 mouse_genomes_project 2 64138277 64246392 - MGP_BALBcJ_P0055038 Scn7a protein_coding protein_coding MGP_BALBcJ_T0058436.1 MGP_BALBcJ_G0026689.1 mouse_genomes_project 2 153066506 153103168 - MGP_BALBcJ_P0058436 Snta1 protein_coding protein_coding MGP_BALBcJ_T0058437.1 MGP_BALBcJ_G0026689.1 mouse_genomes_project 2 153066506 153103150 - MGP_BALBcJ_P0058437 Snta1 protein_coding protein_coding MGP_BALBcJ_T0058438.1 MGP_BALBcJ_G0026689.1 mouse_genomes_project 2 153094393 153103049 - Snta1 protein_coding processed_transcript MGP_BALBcJ_T0013389.1 MGP_BALBcJ_G0011486.1 mouse_genomes_project 2 1787417 1787894 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056732.1 MGP_BALBcJ_G0026283.1 mouse_genomes_project 2 115267617 115278076 + Fam98b protein_coding retained_intron MGP_BALBcJ_T0056733.1 MGP_BALBcJ_G0026283.1 mouse_genomes_project 2 115267617 115289287 + MGP_BALBcJ_P0056733 Fam98b protein_coding protein_coding MGP_BALBcJ_T0056734.1 MGP_BALBcJ_G0026283.1 mouse_genomes_project 2 115276614 115278074 + Fam98b protein_coding processed_transcript MGP_BALBcJ_T0056610.1 MGP_BALBcJ_G0026230.1 mouse_genomes_project 2 109263044 109266524 - MGP_BALBcJ_P0056610 Olfr1282 protein_coding protein_coding MGP_BALBcJ_T0055165.1 MGP_BALBcJ_G0025787.1 mouse_genomes_project 2 68156779 68207652 + MGP_BALBcJ_P0055165 Gorasp2 protein_coding protein_coding MGP_BALBcJ_T0055166.1 MGP_BALBcJ_G0025787.1 mouse_genomes_project 2 68156779 68186893 + MGP_BALBcJ_P0055166 Gorasp2 protein_coding protein_coding MGP_BALBcJ_T0055167.1 MGP_BALBcJ_G0025787.1 mouse_genomes_project 2 68156779 68186875 + MGP_BALBcJ_P0055167 Gorasp2 protein_coding protein_coding MGP_BALBcJ_T0055168.1 MGP_BALBcJ_G0025787.1 mouse_genomes_project 2 68156793 68184510 + MGP_BALBcJ_P0055168 Gorasp2 protein_coding protein_coding MGP_BALBcJ_T0055169.1 MGP_BALBcJ_G0025787.1 mouse_genomes_project 2 68157403 68173100 + Gorasp2 protein_coding processed_transcript MGP_BALBcJ_T0055170.1 MGP_BALBcJ_G0025787.1 mouse_genomes_project 2 68182962 68186871 + Gorasp2 protein_coding processed_transcript MGP_BALBcJ_T0058273.1 MGP_BALBcJ_G0026639.1 mouse_genomes_project 2 151105678 151109471 - MGP_BALBcJ_P0058273 Defb26 protein_coding protein_coding MGP_BALBcJ_T0055188.1 MGP_BALBcJ_G0025790.1 mouse_genomes_project 2 68552628 68580589 + MGP_BALBcJ_P0055188 Dcaf17 protein_coding protein_coding MGP_BALBcJ_T0055189.1 MGP_BALBcJ_G0025790.1 mouse_genomes_project 2 68553058 68572135 + MGP_BALBcJ_P0055189 Dcaf17 protein_coding protein_coding MGP_BALBcJ_T0055190.1 MGP_BALBcJ_G0025790.1 mouse_genomes_project 2 68553146 68584249 + MGP_BALBcJ_P0055190 Dcaf17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055191.1 MGP_BALBcJ_G0025790.1 mouse_genomes_project 2 68553152 68582615 + MGP_BALBcJ_P0055191 Dcaf17 protein_coding protein_coding MGP_BALBcJ_T0055192.1 MGP_BALBcJ_G0025790.1 mouse_genomes_project 2 68553294 68583900 + MGP_BALBcJ_P0055192 Dcaf17 protein_coding protein_coding MGP_BALBcJ_T0055193.1 MGP_BALBcJ_G0025790.1 mouse_genomes_project 2 68569312 68576024 + Dcaf17 protein_coding processed_transcript MGP_BALBcJ_T0007380.1 MGP_BALBcJ_G0006048.1 mouse_genomes_project 2 167135396 167140908 - Gm14235 lincRNA lincRNA MGP_BALBcJ_T0100922.1 MGP_BALBcJ_G0038958.1 mouse_genomes_project 2 7097377 7097505 - Gm23608 snoRNA snoRNA MGP_BALBcJ_T0013822.1 MGP_BALBcJ_G0011919.1 mouse_genomes_project 2 155668770 155669007 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010438.1 MGP_BALBcJ_G0008563.1 mouse_genomes_project 2 126143744 126143870 + Gm22411 miRNA miRNA MGP_BALBcJ_T0102394.1 MGP_BALBcJ_G0040210.1 mouse_genomes_project 2 36275132 36277917 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004038.1 MGP_BALBcJ_G0003584.1 mouse_genomes_project 2 111370944 111425199 - Gm13963 antisense antisense MGP_BALBcJ_T0056547.1 MGP_BALBcJ_G0026206.1 mouse_genomes_project 2 105019096 105022579 - MGP_BALBcJ_P0056547 Fshb protein_coding protein_coding MGP_BALBcJ_T0013758.1 MGP_BALBcJ_G0011855.1 mouse_genomes_project 2 139465462 139465947 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007216.1 MGP_BALBcJ_G0005914.1 mouse_genomes_project 2 72321230 72322291 + Gm14424 lincRNA lincRNA MGP_BALBcJ_T0001062.1 MGP_BALBcJ_G0000990.1 mouse_genomes_project 2 33562540 33564562 - TEC TEC MGP_BALBcJ_T0007117.1 MGP_BALBcJ_G0005836.1 mouse_genomes_project 2 8043839 8068485 + Gm13264 lincRNA lincRNA MGP_BALBcJ_T0007209.1 MGP_BALBcJ_G0005909.1 mouse_genomes_project 2 71707723 71708273 + Gm28640 lincRNA lincRNA MGP_BALBcJ_T0001080.1 MGP_BALBcJ_G0001008.1 mouse_genomes_project 2 66463051 66463917 + TEC TEC MGP_BALBcJ_T0011506.1 MGP_BALBcJ_G0009631.1 mouse_genomes_project 2 173420821 173420946 + Gm27849 misc_RNA misc_RNA MGP_BALBcJ_T0010454.1 MGP_BALBcJ_G0008579.1 mouse_genomes_project 2 156362778 156362865 - Gm23134 miRNA miRNA MGP_BALBcJ_T0102019.1 MGP_BALBcJ_G0039852.1 mouse_genomes_project 2 103954207 103991775 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102020.1 MGP_BALBcJ_G0039852.1 mouse_genomes_project 2 103989378 104352155 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0102021.1 MGP_BALBcJ_G0039852.1 mouse_genomes_project 2 104182389 104352155 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102022.1 MGP_BALBcJ_G0039852.1 mouse_genomes_project 2 104186785 104301685 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102023.1 MGP_BALBcJ_G0039852.1 mouse_genomes_project 2 104350218 104367961 + unitary_pseudogene retained_intron MGP_BALBcJ_T0058464.1 MGP_BALBcJ_G0026697.1 mouse_genomes_project 2 153316169 153350773 + MGP_BALBcJ_P0058464 protein_coding protein_coding MGP_BALBcJ_T0058465.1 MGP_BALBcJ_G0026697.1 mouse_genomes_project 2 153316228 153350730 + MGP_BALBcJ_P0058465 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058466.1 MGP_BALBcJ_G0026697.1 mouse_genomes_project 2 153316242 153350730 + MGP_BALBcJ_P0058466 protein_coding protein_coding MGP_BALBcJ_T0007338.1 MGP_BALBcJ_G0006013.1 mouse_genomes_project 2 151298504 151300463 - Gm26841 lincRNA lincRNA MGP_BALBcJ_T0059484.1 MGP_BALBcJ_G0026917.1 mouse_genomes_project 2 171430423 171440474 + MGP_BALBcJ_P0059484 Fam210b protein_coding protein_coding MGP_BALBcJ_T0053789.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605051 27613294 + MGP_BALBcJ_P0053789 Dolpp1 protein_coding protein_coding MGP_BALBcJ_T0053790.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605213 27613292 + MGP_BALBcJ_P0053790 Dolpp1 protein_coding protein_coding MGP_BALBcJ_T0053791.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605213 27613292 + MGP_BALBcJ_P0053791 Dolpp1 protein_coding protein_coding MGP_BALBcJ_T0053792.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605225 27610089 + Dolpp1 protein_coding retained_intron MGP_BALBcJ_T0053793.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605227 27608697 + Dolpp1 protein_coding retained_intron MGP_BALBcJ_T0053794.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605236 27613293 + MGP_BALBcJ_P0053794 Dolpp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053795.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605237 27608942 + Dolpp1 protein_coding retained_intron MGP_BALBcJ_T0053796.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605242 27612453 + MGP_BALBcJ_P0053796 Dolpp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053797.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27605251 27610581 + Dolpp1 protein_coding retained_intron MGP_BALBcJ_T0053798.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27608383 27613292 + Dolpp1 protein_coding processed_transcript MGP_BALBcJ_T0053799.1 MGP_BALBcJ_G0025541.1 mouse_genomes_project 2 27610194 27612753 + Dolpp1 protein_coding processed_transcript MGP_BALBcJ_T0007181.1 MGP_BALBcJ_G0005886.1 mouse_genomes_project 2 48849663 48867467 - 1700057H21Rik lincRNA lincRNA MGP_BALBcJ_T0007182.1 MGP_BALBcJ_G0005886.1 mouse_genomes_project 2 48849729 48866582 - 1700057H21Rik lincRNA lincRNA MGP_BALBcJ_T0056617.1 MGP_BALBcJ_G0026237.1 mouse_genomes_project 2 109538810 109539749 - MGP_BALBcJ_P0056617 protein_coding protein_coding MGP_BALBcJ_T0055744.1 MGP_BALBcJ_G0025957.1 mouse_genomes_project 2 84530631 84532665 - MGP_BALBcJ_P0055744 protein_coding protein_coding MGP_BALBcJ_T0057273.1 MGP_BALBcJ_G0026390.1 mouse_genomes_project 2 120650104 120706021 + protein_coding processed_transcript MGP_BALBcJ_T0007112.1 MGP_BALBcJ_G0005833.1 mouse_genomes_project 2 6186788 6194613 + 1700061F12Rik lincRNA lincRNA MGP_BALBcJ_T0013806.1 MGP_BALBcJ_G0011903.1 mouse_genomes_project 2 153950835 153951464 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003929.1 MGP_BALBcJ_G0003508.1 mouse_genomes_project 2 28881557 28888694 - Gm13425 antisense antisense MGP_BALBcJ_T0013819.1 MGP_BALBcJ_G0011916.1 mouse_genomes_project 2 155620208 155629667 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058871.1 MGP_BALBcJ_G0026766.1 mouse_genomes_project 2 157081448 157108486 + MGP_BALBcJ_P0058871 Bpi protein_coding protein_coding MGP_BALBcJ_T0058872.1 MGP_BALBcJ_G0026766.1 mouse_genomes_project 2 157081448 157108350 + MGP_BALBcJ_P0058872 Bpi protein_coding protein_coding MGP_BALBcJ_T0058873.1 MGP_BALBcJ_G0026766.1 mouse_genomes_project 2 157081448 157108489 + MGP_BALBcJ_P0058873 Bpi protein_coding protein_coding MGP_BALBcJ_T0102395.1 MGP_BALBcJ_G0040211.1 mouse_genomes_project 2 36698538 36703728 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102388.1 MGP_BALBcJ_G0040204.1 mouse_genomes_project 2 33623828 33624767 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013395.1 MGP_BALBcJ_G0011492.1 mouse_genomes_project 2 5140474 5141128 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004137.1 MGP_BALBcJ_G0003660.1 mouse_genomes_project 2 162517916 162518868 + 0610039K10Rik antisense antisense MGP_BALBcJ_T0004138.1 MGP_BALBcJ_G0003660.1 mouse_genomes_project 2 162517916 162518867 + 0610039K10Rik antisense antisense MGP_BALBcJ_T0052875.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21477912 21534727 - MGP_BALBcJ_P0052875 Pax8 protein_coding protein_coding MGP_BALBcJ_T0052876.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21478746 21480435 - Pax8 protein_coding retained_intron MGP_BALBcJ_T0052877.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21478872 21534225 - MGP_BALBcJ_P0052877 Pax8 protein_coding protein_coding MGP_BALBcJ_T0052878.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21478900 21534225 - MGP_BALBcJ_P0052878 Pax8 protein_coding protein_coding MGP_BALBcJ_T0052879.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21486875 21534702 - MGP_BALBcJ_P0052879 Pax8 protein_coding protein_coding MGP_BALBcJ_T0052880.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21500467 21534343 - MGP_BALBcJ_P0052880 Pax8 protein_coding protein_coding MGP_BALBcJ_T0052881.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21502288 21505191 - Pax8 protein_coding processed_transcript MGP_BALBcJ_T0052882.1 MGP_BALBcJ_G0025383.1 mouse_genomes_project 2 21530950 21534702 - Pax8 protein_coding retained_intron MGP_BALBcJ_T0100960.1 MGP_BALBcJ_G0038996.1 mouse_genomes_project 2 82929555 82929699 + Gm23716 snoRNA snoRNA MGP_BALBcJ_T0056782.1 MGP_BALBcJ_G0026295.1 mouse_genomes_project 2 116789389 116797885 - MGP_BALBcJ_P0056782 protein_coding protein_coding MGP_BALBcJ_T0056783.1 MGP_BALBcJ_G0026295.1 mouse_genomes_project 2 116792714 116797849 - protein_coding retained_intron MGP_BALBcJ_T0013539.1 MGP_BALBcJ_G0011636.1 mouse_genomes_project 2 56509646 56510171 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013523.1 MGP_BALBcJ_G0011620.1 mouse_genomes_project 2 51678692 51679509 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057874.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134123202 134206031 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057875.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134123763 134206118 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057876.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134123824 134341275 + Plcb4 protein_coding retained_intron MGP_BALBcJ_T0057877.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134123920 134448832 + MGP_BALBcJ_P0057877 Plcb4 protein_coding protein_coding MGP_BALBcJ_T0057878.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134205109 134374755 + Plcb4 protein_coding retained_intron MGP_BALBcJ_T0057879.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134205109 134482205 + MGP_BALBcJ_P0057879 Plcb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057880.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134228406 134372152 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057881.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134269109 134482004 + MGP_BALBcJ_P0057881 Plcb4 protein_coding protein_coding MGP_BALBcJ_T0057882.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134336194 134481990 + MGP_BALBcJ_P0057882 Plcb4 protein_coding protein_coding MGP_BALBcJ_T0057883.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134351147 134404198 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057884.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134406964 134415245 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057885.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134411362 134415198 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057886.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134448847 134454011 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0057887.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134453690 134483517 + MGP_BALBcJ_P0057887 Plcb4 protein_coding protein_coding MGP_BALBcJ_T0057888.1 MGP_BALBcJ_G0026531.1 mouse_genomes_project 2 134476165 134476979 + Plcb4 protein_coding processed_transcript MGP_BALBcJ_T0003924.1 MGP_BALBcJ_G0003504.1 mouse_genomes_project 2 27445122 27446552 - 1700084E18Rik antisense antisense MGP_BALBcJ_T0003925.1 MGP_BALBcJ_G0003504.1 mouse_genomes_project 2 27445820 27446552 - 1700084E18Rik antisense pseudogene MGP_BALBcJ_T0056333.1 MGP_BALBcJ_G0026163.1 mouse_genomes_project 2 99791855 99802565 + Commd9 protein_coding processed_transcript MGP_BALBcJ_T0056334.1 MGP_BALBcJ_G0026163.1 mouse_genomes_project 2 99791861 99807271 + MGP_BALBcJ_P0056334 Commd9 protein_coding protein_coding MGP_BALBcJ_T0056335.1 MGP_BALBcJ_G0026163.1 mouse_genomes_project 2 99791868 99802831 + Commd9 protein_coding retained_intron MGP_BALBcJ_T0056336.1 MGP_BALBcJ_G0026163.1 mouse_genomes_project 2 99791871 99801024 + Commd9 protein_coding retained_intron MGP_BALBcJ_T0052692.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15269959 15293869 - MGP_BALBcJ_P0052692 Dnajc1 protein_coding protein_coding MGP_BALBcJ_T0052693.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15280638 15472840 - MGP_BALBcJ_P0052693 Dnajc1 protein_coding protein_coding MGP_BALBcJ_T0052694.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15283536 15291214 - Dnajc1 protein_coding processed_transcript MGP_BALBcJ_T0052695.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15288060 15472859 - MGP_BALBcJ_P0052695 Dnajc1 protein_coding protein_coding MGP_BALBcJ_T0052696.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15291446 15472449 - MGP_BALBcJ_P0052696 Dnajc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052697.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15291446 15472671 - MGP_BALBcJ_P0052697 Dnajc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052698.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15291466 15472450 - MGP_BALBcJ_P0052698 Dnajc1 protein_coding protein_coding MGP_BALBcJ_T0052699.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15293842 15381511 - MGP_BALBcJ_P0052699 Dnajc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052700.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15381132 15384753 - Dnajc1 protein_coding retained_intron MGP_BALBcJ_T0052701.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15383079 15472853 - Dnajc1 protein_coding processed_transcript MGP_BALBcJ_T0052702.1 MGP_BALBcJ_G0025347.1 mouse_genomes_project 2 15391364 15472859 - Dnajc1 protein_coding retained_intron MGP_BALBcJ_T0013771.1 MGP_BALBcJ_G0011868.1 mouse_genomes_project 2 143283417 143285671 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055460.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75481811 75547196 - MGP_BALBcJ_P0055460 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055461.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75496245 75547391 - MGP_BALBcJ_P0055461 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055462.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75496245 75547369 - MGP_BALBcJ_P0055462 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055463.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75496356 75547199 - MGP_BALBcJ_P0055463 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055464.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75496358 75525091 - Cwc22 protein_coding processed_transcript MGP_BALBcJ_T0055465.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75496360 75547369 - MGP_BALBcJ_P0055465 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055466.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75506836 75508728 - Cwc22 protein_coding processed_transcript MGP_BALBcJ_T0055467.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75516989 75547215 - Cwc22 protein_coding processed_transcript MGP_BALBcJ_T0055468.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75526606 75547199 - Cwc22 protein_coding processed_transcript MGP_BALBcJ_T0055469.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75529850 75546954 - MGP_BALBcJ_P0055469 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055470.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75529936 75547205 - MGP_BALBcJ_P0055470 Cwc22 protein_coding protein_coding MGP_BALBcJ_T0055471.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75529992 75537162 - Cwc22 protein_coding processed_transcript MGP_BALBcJ_T0055472.1 MGP_BALBcJ_G0025846.1 mouse_genomes_project 2 75531338 75537220 - Cwc22 protein_coding processed_transcript MGP_BALBcJ_T0100983.1 MGP_BALBcJ_G0039019.1 mouse_genomes_project 2 128674257 128674329 + Snord57 snoRNA snoRNA MGP_BALBcJ_T0056596.1 MGP_BALBcJ_G0026219.1 mouse_genomes_project 2 108655802 108673903 + MGP_BALBcJ_P0056596 Muc15 protein_coding protein_coding MGP_BALBcJ_T0056597.1 MGP_BALBcJ_G0026219.1 mouse_genomes_project 2 108656073 108673903 + MGP_BALBcJ_P0056597 Muc15 protein_coding protein_coding MGP_BALBcJ_T0056598.1 MGP_BALBcJ_G0026219.1 mouse_genomes_project 2 108656110 108671973 + MGP_BALBcJ_P0056598 Muc15 protein_coding protein_coding MGP_BALBcJ_T0058483.1 MGP_BALBcJ_G0026702.1 mouse_genomes_project 2 153595282 153619539 - MGP_BALBcJ_P0058483 Eif2s2 protein_coding protein_coding MGP_BALBcJ_T0058484.1 MGP_BALBcJ_G0026702.1 mouse_genomes_project 2 153595290 153619386 - MGP_BALBcJ_P0058484 Eif2s2 protein_coding protein_coding MGP_BALBcJ_T0058485.1 MGP_BALBcJ_G0026702.1 mouse_genomes_project 2 153607896 153619435 - Eif2s2 protein_coding retained_intron MGP_BALBcJ_T0058486.1 MGP_BALBcJ_G0026702.1 mouse_genomes_project 2 153607928 153619399 - MGP_BALBcJ_P0058486 Eif2s2 protein_coding protein_coding MGP_BALBcJ_T0058487.1 MGP_BALBcJ_G0026702.1 mouse_genomes_project 2 153607931 153619412 - Eif2s2 protein_coding retained_intron MGP_BALBcJ_T0057653.1 MGP_BALBcJ_G0026484.1 mouse_genomes_project 2 128970642 128971518 + MGP_BALBcJ_P0057653 Oxt protein_coding protein_coding MGP_BALBcJ_T0007242.1 MGP_BALBcJ_G0005938.1 mouse_genomes_project 2 91292350 91309406 + Gm10804 lincRNA lincRNA MGP_BALBcJ_T0007243.1 MGP_BALBcJ_G0005938.1 mouse_genomes_project 2 91292351 91296257 + Gm10804 lincRNA lincRNA MGP_BALBcJ_T0007244.1 MGP_BALBcJ_G0005938.1 mouse_genomes_project 2 91292352 91305933 + Gm10804 lincRNA lincRNA MGP_BALBcJ_T0007245.1 MGP_BALBcJ_G0005938.1 mouse_genomes_project 2 91307972 91308209 + Gm10804 lincRNA lincRNA MGP_BALBcJ_T0057365.1 MGP_BALBcJ_G0026412.1 mouse_genomes_project 2 124268138 124269581 + Fgf7 protein_coding processed_transcript MGP_BALBcJ_T0057366.1 MGP_BALBcJ_G0026412.1 mouse_genomes_project 2 124268138 124324963 + MGP_BALBcJ_P0057366 Fgf7 protein_coding protein_coding MGP_BALBcJ_T0057367.1 MGP_BALBcJ_G0026412.1 mouse_genomes_project 2 124268453 124324299 + MGP_BALBcJ_P0057367 Fgf7 protein_coding protein_coding MGP_BALBcJ_T0013658.1 MGP_BALBcJ_G0011755.1 mouse_genomes_project 2 98247257 98247513 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004123.1 MGP_BALBcJ_G0003649.1 mouse_genomes_project 2 155136277 155137347 - Gm14170 antisense antisense MGP_BALBcJ_T0056049.1 MGP_BALBcJ_G0026116.1 mouse_genomes_project 2 89002152 89028333 - Ddb2 protein_coding processed_transcript MGP_BALBcJ_T0056050.1 MGP_BALBcJ_G0026116.1 mouse_genomes_project 2 89002168 89030151 - Ddb2 protein_coding processed_transcript MGP_BALBcJ_T0056051.1 MGP_BALBcJ_G0026116.1 mouse_genomes_project 2 89002183 89030129 - MGP_BALBcJ_P0056051 Ddb2 protein_coding protein_coding MGP_BALBcJ_T0056052.1 MGP_BALBcJ_G0026116.1 mouse_genomes_project 2 89002201 89030204 - Ddb2 protein_coding processed_transcript MGP_BALBcJ_T0056053.1 MGP_BALBcJ_G0026116.1 mouse_genomes_project 2 89002436 89030226 - MGP_BALBcJ_P0056053 Ddb2 protein_coding protein_coding MGP_BALBcJ_T0007303.1 MGP_BALBcJ_G0005985.1 mouse_genomes_project 2 127491856 127508462 + A730036I17Rik lincRNA lincRNA MGP_BALBcJ_T0007304.1 MGP_BALBcJ_G0005985.1 mouse_genomes_project 2 127491915 127506133 + A730036I17Rik lincRNA lincRNA MGP_BALBcJ_T0007305.1 MGP_BALBcJ_G0005985.1 mouse_genomes_project 2 127500904 127504850 + A730036I17Rik lincRNA lincRNA MGP_BALBcJ_T0053813.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27628823 27661455 + MGP_BALBcJ_P0053813 Ptpa protein_coding protein_coding MGP_BALBcJ_T0053814.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27628915 27661456 + MGP_BALBcJ_P0053814 Ptpa protein_coding protein_coding MGP_BALBcJ_T0053815.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27628921 27644273 + MGP_BALBcJ_P0053815 Ptpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053816.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27628926 27661267 + MGP_BALBcJ_P0053816 Ptpa protein_coding protein_coding MGP_BALBcJ_T0053817.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27628980 27661454 + Ptpa protein_coding retained_intron MGP_BALBcJ_T0053818.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27629086 27640663 + Ptpa protein_coding processed_transcript MGP_BALBcJ_T0053819.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27640614 27651751 + Ptpa protein_coding retained_intron MGP_BALBcJ_T0053820.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27651878 27660600 + MGP_BALBcJ_P0053820 Ptpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053821.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27655502 27660781 + MGP_BALBcJ_P0053821 Ptpa protein_coding protein_coding MGP_BALBcJ_T0053822.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27656384 27660456 + MGP_BALBcJ_P0053822 Ptpa protein_coding protein_coding MGP_BALBcJ_T0053823.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27656868 27660549 + Ptpa protein_coding processed_transcript MGP_BALBcJ_T0053824.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27659305 27660724 + Ptpa protein_coding processed_transcript MGP_BALBcJ_T0053825.1 MGP_BALBcJ_G0025543.1 mouse_genomes_project 2 27659365 27660426 + Ptpa protein_coding processed_transcript MGP_BALBcJ_T0059623.1 MGP_BALBcJ_G0026957.1 mouse_genomes_project 2 179323698 179334156 + MGP_BALBcJ_P0059623 Lsm14b protein_coding protein_coding MGP_BALBcJ_T0059624.1 MGP_BALBcJ_G0026957.1 mouse_genomes_project 2 179323897 179334163 + MGP_BALBcJ_P0059624 Lsm14b protein_coding protein_coding MGP_BALBcJ_T0059625.1 MGP_BALBcJ_G0026957.1 mouse_genomes_project 2 179326617 179332500 + Lsm14b protein_coding processed_transcript MGP_BALBcJ_T0017796.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982270 111996711 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0017797.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982378 112000971 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0017798.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982379 112000261 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0017799.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982381 112000784 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0017800.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982394 111989336 + A530058N18Rik processed_transcript retained_intron MGP_BALBcJ_T0017801.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982412 111986178 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0017802.1 MGP_BALBcJ_G0015395.1 mouse_genomes_project 2 111982413 112000129 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0059116.1 MGP_BALBcJ_G0026834.1 mouse_genomes_project 2 163474139 163479216 - MGP_BALBcJ_P0059116 Wfdc6b protein_coding protein_coding MGP_BALBcJ_T0053036.1 MGP_BALBcJ_G0025410.1 mouse_genomes_project 2 22380395 22381661 + MGP_BALBcJ_P0053036 Lrrc26 protein_coding protein_coding MGP_BALBcJ_T0059892.1 MGP_BALBcJ_G0027004.1 mouse_genomes_project 2 180923614 180949400 + MGP_BALBcJ_P0059892 Prpf6 protein_coding protein_coding MGP_BALBcJ_T0059896.1 MGP_BALBcJ_G0027004.1 mouse_genomes_project 2 180933339 180991689 + MGP_BALBcJ_P0059896 Prpf6 protein_coding protein_coding MGP_BALBcJ_T0059897.1 MGP_BALBcJ_G0027004.1 mouse_genomes_project 2 180933342 180991698 + MGP_BALBcJ_P0059897 Prpf6 protein_coding protein_coding MGP_BALBcJ_T0059898.1 MGP_BALBcJ_G0027004.1 mouse_genomes_project 2 180933396 180977041 + Prpf6 protein_coding retained_intron MGP_BALBcJ_T0059007.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162278030 162292357 - MGP_BALBcJ_P0059007 Oser1 protein_coding protein_coding MGP_BALBcJ_T0059008.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162278061 162297482 - MGP_BALBcJ_P0059008 Oser1 protein_coding protein_coding MGP_BALBcJ_T0059009.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162278760 162291973 - Oser1 protein_coding processed_transcript MGP_BALBcJ_T0059010.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162278794 162284285 - Oser1 protein_coding processed_transcript MGP_BALBcJ_T0059011.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162279089 162297482 - Oser1 protein_coding processed_transcript MGP_BALBcJ_T0059012.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162279278 162289722 - MGP_BALBcJ_P0059012 Oser1 protein_coding protein_coding MGP_BALBcJ_T0059013.1 MGP_BALBcJ_G0026796.1 mouse_genomes_project 2 162295661 162297335 - Oser1 protein_coding processed_transcript MGP_BALBcJ_T0003893.1 MGP_BALBcJ_G0003482.1 mouse_genomes_project 2 16724723 16727676 - Gm13348 antisense antisense MGP_BALBcJ_T0100974.1 MGP_BALBcJ_G0039010.1 mouse_genomes_project 2 119047588 119047802 + Gm22865 snoRNA snoRNA MGP_BALBcJ_T0013623.1 MGP_BALBcJ_G0011720.1 mouse_genomes_project 2 85009151 85009558 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055899.1 MGP_BALBcJ_G0026086.1 mouse_genomes_project 2 87706523 87709951 + MGP_BALBcJ_P0055899 Olfr1258 protein_coding protein_coding MGP_BALBcJ_T0055900.1 MGP_BALBcJ_G0026086.1 mouse_genomes_project 2 87709015 87709951 + MGP_BALBcJ_P0055900 Olfr1258 protein_coding protein_coding MGP_BALBcJ_T0058481.1 MGP_BALBcJ_G0026701.1 mouse_genomes_project 2 153514893 153802648 + MGP_BALBcJ_P0058481 a protein_coding protein_coding MGP_BALBcJ_T0058488.1 MGP_BALBcJ_G0026701.1 mouse_genomes_project 2 153680028 153800580 + a protein_coding processed_transcript MGP_BALBcJ_T0058489.1 MGP_BALBcJ_G0026701.1 mouse_genomes_project 2 153680067 153805932 + MGP_BALBcJ_P0058489 a protein_coding protein_coding MGP_BALBcJ_T0058490.1 MGP_BALBcJ_G0026701.1 mouse_genomes_project 2 153782141 153805553 + MGP_BALBcJ_P0058490 a protein_coding protein_coding MGP_BALBcJ_T0058491.1 MGP_BALBcJ_G0026701.1 mouse_genomes_project 2 153782200 153805933 + MGP_BALBcJ_P0058491 a protein_coding protein_coding MGP_BALBcJ_T0058492.1 MGP_BALBcJ_G0026701.1 mouse_genomes_project 2 153802535 153805932 + a protein_coding retained_intron MGP_BALBcJ_T0053603.1 MGP_BALBcJ_G0025514.1 mouse_genomes_project 2 26961182 26965310 + Gm13547 protein_coding processed_transcript MGP_BALBcJ_T0053605.1 MGP_BALBcJ_G0025514.1 mouse_genomes_project 2 26963431 29565985 + MGP_BALBcJ_P0053605 Gm13547 protein_coding protein_coding MGP_BALBcJ_T0004155.1 MGP_BALBcJ_G0003673.1 mouse_genomes_project 2 169406538 169431554 + Bcas1os2 antisense antisense MGP_BALBcJ_T0010388.1 MGP_BALBcJ_G0008513.1 mouse_genomes_project 2 29986508 29986590 - Mir2861 miRNA miRNA MGP_BALBcJ_T0057179.1 MGP_BALBcJ_G0026365.1 mouse_genomes_project 2 119460649 119486495 + MGP_BALBcJ_P0057179 Pdia3 protein_coding protein_coding MGP_BALBcJ_T0057180.1 MGP_BALBcJ_G0026365.1 mouse_genomes_project 2 119460757 119472426 + Pdia3 protein_coding processed_transcript MGP_BALBcJ_T0057181.1 MGP_BALBcJ_G0026365.1 mouse_genomes_project 2 119460982 119481897 + MGP_BALBcJ_P0057181 Pdia3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057182.1 MGP_BALBcJ_G0026365.1 mouse_genomes_project 2 119472454 119480344 + Pdia3 protein_coding retained_intron MGP_BALBcJ_T0055912.1 MGP_BALBcJ_G0026093.1 mouse_genomes_project 2 87881956 87907204 - MGP_BALBcJ_P0055912 protein_coding protein_coding MGP_BALBcJ_T0057475.1 MGP_BALBcJ_G0026437.1 mouse_genomes_project 2 125711677 125777984 - MGP_BALBcJ_P0057475 Kcnip3 protein_coding protein_coding MGP_BALBcJ_T0057476.1 MGP_BALBcJ_G0026437.1 mouse_genomes_project 2 125711677 125777984 - MGP_BALBcJ_P0057476 Kcnip3 protein_coding protein_coding MGP_BALBcJ_T0057477.1 MGP_BALBcJ_G0026437.1 mouse_genomes_project 2 125713307 125738511 - MGP_BALBcJ_P0057477 Kcnip3 protein_coding protein_coding MGP_BALBcJ_T0057478.1 MGP_BALBcJ_G0026437.1 mouse_genomes_project 2 125713407 125778708 - Kcnip3 protein_coding processed_transcript MGP_BALBcJ_T0013444.1 MGP_BALBcJ_G0011541.1 mouse_genomes_project 2 21555541 21556552 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003933.1 MGP_BALBcJ_G0003512.1 mouse_genomes_project 2 29276392 29277093 - Gm13609 antisense antisense MGP_BALBcJ_T0056561.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107597052 107649357 + MGP_BALBcJ_P0056561 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056562.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107598249 107649357 + MGP_BALBcJ_P0056562 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056563.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107598249 107649357 + MGP_BALBcJ_P0056563 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056564.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107598249 107649357 + MGP_BALBcJ_P0056564 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056565.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107599384 107649357 + MGP_BALBcJ_P0056565 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056566.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107614789 107649357 + MGP_BALBcJ_P0056566 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056567.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107615379 107649357 + MGP_BALBcJ_P0056567 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056568.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107615915 107649357 + MGP_BALBcJ_P0056568 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056569.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107616761 107649357 + MGP_BALBcJ_P0056569 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056570.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107616821 107649357 + MGP_BALBcJ_P0056570 Bdnf protein_coding protein_coding MGP_BALBcJ_T0056571.1 MGP_BALBcJ_G0026210.1 mouse_genomes_project 2 107631793 107649357 + MGP_BALBcJ_P0056571 Bdnf protein_coding protein_coding MGP_BALBcJ_T0102416.1 MGP_BALBcJ_G0040232.1 mouse_genomes_project 2 85529683 85529996 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0054483.1 MGP_BALBcJ_G0025667.1 mouse_genomes_project 2 34712263 34723216 - MGP_BALBcJ_P0054483 Zbtb26 protein_coding protein_coding MGP_BALBcJ_T0054484.1 MGP_BALBcJ_G0025667.1 mouse_genomes_project 2 34715113 34723215 - MGP_BALBcJ_P0054484 Zbtb26 protein_coding protein_coding MGP_BALBcJ_T0054485.1 MGP_BALBcJ_G0025667.1 mouse_genomes_project 2 34718573 34723230 - Zbtb26 protein_coding processed_transcript MGP_BALBcJ_T0057104.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119216989 119231074 + Tubgcp4 protein_coding processed_transcript MGP_BALBcJ_T0057105.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217503 119245589 + MGP_BALBcJ_P0057105 Tubgcp4 protein_coding protein_coding MGP_BALBcJ_T0057106.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217544 119245588 + MGP_BALBcJ_P0057106 Tubgcp4 protein_coding protein_coding MGP_BALBcJ_T0057107.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217550 119245589 + MGP_BALBcJ_P0057107 Tubgcp4 protein_coding protein_coding MGP_BALBcJ_T0057108.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217575 119245588 + Tubgcp4 protein_coding retained_intron MGP_BALBcJ_T0057109.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217581 119222576 + Tubgcp4 protein_coding processed_transcript MGP_BALBcJ_T0057110.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217603 119241035 + MGP_BALBcJ_P0057110 Tubgcp4 protein_coding protein_coding MGP_BALBcJ_T0057111.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217628 119231117 + Tubgcp4 protein_coding processed_transcript MGP_BALBcJ_T0057112.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119217917 119233358 + Tubgcp4 protein_coding retained_intron MGP_BALBcJ_T0057113.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119220320 119231120 + Tubgcp4 protein_coding processed_transcript MGP_BALBcJ_T0057114.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119230256 119231447 + Tubgcp4 protein_coding retained_intron MGP_BALBcJ_T0057115.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119233992 119243868 + Tubgcp4 protein_coding retained_intron MGP_BALBcJ_T0057116.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119234738 119239075 + Tubgcp4 protein_coding retained_intron MGP_BALBcJ_T0057117.1 MGP_BALBcJ_G0026358.1 mouse_genomes_project 2 119238608 119243050 + Tubgcp4 protein_coding retained_intron MGP_BALBcJ_T0102446.1 MGP_BALBcJ_G0040262.1 mouse_genomes_project 2 152712073 152716423 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003881.1 MGP_BALBcJ_G0003472.1 mouse_genomes_project 2 6922422 6930891 + Gm13262 antisense antisense MGP_BALBcJ_T0013841.1 MGP_BALBcJ_G0011938.1 mouse_genomes_project 2 164850307 164850904 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010329.1 MGP_BALBcJ_G0008454.1 mouse_genomes_project 2 7502558 7502655 + Mir467c miRNA miRNA MGP_BALBcJ_T0017706.1 MGP_BALBcJ_G0015339.1 mouse_genomes_project 2 22902146 22912857 - Gm13538 processed_transcript processed_transcript MGP_BALBcJ_T0004039.1 MGP_BALBcJ_G0003585.1 mouse_genomes_project 2 111424785 111426409 - Gm13966 antisense antisense MGP_BALBcJ_T0055355.1 MGP_BALBcJ_G0025823.1 mouse_genomes_project 2 72280339 72316835 + MGP_BALBcJ_P0055355 Hoxd3 protein_coding protein_coding MGP_BALBcJ_T0055360.1 MGP_BALBcJ_G0025823.1 mouse_genomes_project 2 72301349 72312778 + MGP_BALBcJ_P0055360 Hoxd3 protein_coding protein_coding MGP_BALBcJ_T0055361.1 MGP_BALBcJ_G0025823.1 mouse_genomes_project 2 72304939 72316479 + MGP_BALBcJ_P0055361 Hoxd3 protein_coding protein_coding MGP_BALBcJ_T0055362.1 MGP_BALBcJ_G0025823.1 mouse_genomes_project 2 72308042 72316464 + MGP_BALBcJ_P0055362 Hoxd3 protein_coding protein_coding MGP_BALBcJ_T0055363.1 MGP_BALBcJ_G0025823.1 mouse_genomes_project 2 72314237 72315160 + MGP_BALBcJ_P0055363 Hoxd3 protein_coding protein_coding MGP_BALBcJ_T0055364.1 MGP_BALBcJ_G0025823.1 mouse_genomes_project 2 72314285 72317006 + Hoxd3 protein_coding retained_intron MGP_BALBcJ_T0013774.1 MGP_BALBcJ_G0011871.1 mouse_genomes_project 2 144220721 144221033 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010351.1 MGP_BALBcJ_G0008476.1 mouse_genomes_project 2 7520737 7520839 + Mir297a-3 miRNA miRNA MGP_BALBcJ_T0004124.1 MGP_BALBcJ_G0003650.1 mouse_genomes_project 2 156344360 156345565 - Gm14286 antisense antisense MGP_BALBcJ_T0010390.1 MGP_BALBcJ_G0008515.1 mouse_genomes_project 2 30644527 30644580 - Gm25998 miRNA miRNA MGP_BALBcJ_T0052587.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10150871 10348147 - MGP_BALBcJ_P0052587 Rsu1 protein_coding protein_coding MGP_BALBcJ_T0052588.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10151062 10348229 - MGP_BALBcJ_P0052588 Rsu1 protein_coding protein_coding MGP_BALBcJ_T0052589.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10151245 10348208 - MGP_BALBcJ_P0052589 Rsu1 protein_coding protein_coding MGP_BALBcJ_T0052590.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10239718 10348122 - Rsu1 protein_coding retained_intron MGP_BALBcJ_T0052591.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10294367 10348147 - Rsu1 protein_coding retained_intron MGP_BALBcJ_T0052592.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10295137 10348084 - MGP_BALBcJ_P0052592 Rsu1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052593.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10296960 10348035 - Rsu1 protein_coding retained_intron MGP_BALBcJ_T0052594.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10297473 10348105 - MGP_BALBcJ_P0052594 Rsu1 protein_coding protein_coding MGP_BALBcJ_T0052595.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10344274 10348125 - Rsu1 protein_coding retained_intron MGP_BALBcJ_T0052596.1 MGP_BALBcJ_G0025327.1 mouse_genomes_project 2 10347573 10348110 - Rsu1 protein_coding retained_intron MGP_BALBcJ_T0013400.1 MGP_BALBcJ_G0011497.1 mouse_genomes_project 2 7904892 7905313 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007111.1 MGP_BALBcJ_G0005832.1 mouse_genomes_project 2 4696417 4757871 - Gm13211 lincRNA lincRNA MGP_BALBcJ_T0013833.1 MGP_BALBcJ_G0011930.1 mouse_genomes_project 2 160347057 160347533 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004084.1 MGP_BALBcJ_G0003616.1 mouse_genomes_project 2 131312152 131313410 - Gm14104 antisense antisense MGP_BALBcJ_T0013808.1 MGP_BALBcJ_G0011905.1 mouse_genomes_project 2 154212834 154213149 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004119.1 MGP_BALBcJ_G0003645.1 mouse_genomes_project 2 154351365 154354000 + Gssos1 antisense antisense MGP_BALBcJ_T0053942.1 MGP_BALBcJ_G0025561.1 mouse_genomes_project 2 28888141 28903890 + MGP_BALBcJ_P0053942 Prdm12 protein_coding protein_coding MGP_BALBcJ_T0007379.1 MGP_BALBcJ_G0006047.1 mouse_genomes_project 2 166833185 166837143 + Gm14319 lincRNA lincRNA MGP_BALBcJ_T0003895.1 MGP_BALBcJ_G0003484.1 mouse_genomes_project 2 17508458 17512857 - antisense antisense MGP_BALBcJ_T0058439.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153131331 153236973 + MGP_BALBcJ_P0058439 Cbfa2t2 protein_coding protein_coding MGP_BALBcJ_T0058440.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153131334 153223568 + MGP_BALBcJ_P0058440 Cbfa2t2 protein_coding protein_coding MGP_BALBcJ_T0058441.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153131345 153236973 + MGP_BALBcJ_P0058441 Cbfa2t2 protein_coding protein_coding MGP_BALBcJ_T0058442.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153131385 153214977 + MGP_BALBcJ_P0058442 Cbfa2t2 protein_coding protein_coding MGP_BALBcJ_T0058443.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153131692 153201637 + MGP_BALBcJ_P0058443 Cbfa2t2 protein_coding protein_coding MGP_BALBcJ_T0058444.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153207389 153236973 + MGP_BALBcJ_P0058444 Cbfa2t2 protein_coding protein_coding MGP_BALBcJ_T0058445.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153213114 153215205 + Cbfa2t2 protein_coding retained_intron MGP_BALBcJ_T0058446.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153221138 153228749 + Cbfa2t2 protein_coding retained_intron MGP_BALBcJ_T0058447.1 MGP_BALBcJ_G0026690.1 mouse_genomes_project 2 153228188 153232602 + Cbfa2t2 protein_coding retained_intron MGP_BALBcJ_T0011501.1 MGP_BALBcJ_G0009626.1 mouse_genomes_project 2 163658024 163658340 + Gm22596 misc_RNA misc_RNA MGP_BALBcJ_T0102437.1 MGP_BALBcJ_G0040253.1 mouse_genomes_project 2 120148980 120151335 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004173.1 MGP_BALBcJ_G0003685.1 mouse_genomes_project 2 179637671 179645562 + Gata5os antisense antisense MGP_BALBcJ_T0013612.1 MGP_BALBcJ_G0011709.1 mouse_genomes_project 2 81587548 81587919 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053474.1 MGP_BALBcJ_G0025488.1 mouse_genomes_project 2 24669378 24675111 + Wdr5 protein_coding processed_transcript MGP_BALBcJ_T0053475.1 MGP_BALBcJ_G0025488.1 mouse_genomes_project 2 24669488 24691154 + MGP_BALBcJ_P0053475 Wdr5 protein_coding unknown_likely_coding MGP_BALBcJ_T0053476.1 MGP_BALBcJ_G0025488.1 mouse_genomes_project 2 24674218 24689658 + MGP_BALBcJ_P0053476 Wdr5 protein_coding protein_coding MGP_BALBcJ_T0053477.1 MGP_BALBcJ_G0025488.1 mouse_genomes_project 2 24682181 24687970 + Wdr5 protein_coding processed_transcript MGP_BALBcJ_T0059128.1 MGP_BALBcJ_G0026842.1 mouse_genomes_project 2 163580210 163582823 + MGP_BALBcJ_P0059128 Wfdc13 protein_coding protein_coding MGP_BALBcJ_T0102401.1 MGP_BALBcJ_G0040217.1 mouse_genomes_project 2 83170750 83171695 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0059213.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163963663 163980936 + MGP_BALBcJ_P0059213 Cd40 protein_coding protein_coding MGP_BALBcJ_T0059214.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163963663 163970754 + MGP_BALBcJ_P0059214 Cd40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059215.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163963672 163979639 + MGP_BALBcJ_P0059215 Cd40 protein_coding protein_coding MGP_BALBcJ_T0059216.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163963716 163978762 + MGP_BALBcJ_P0059216 Cd40 protein_coding protein_coding MGP_BALBcJ_T0059217.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163963717 163970811 + MGP_BALBcJ_P0059217 Cd40 protein_coding protein_coding MGP_BALBcJ_T0059218.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163963740 163978984 + MGP_BALBcJ_P0059218 Cd40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059219.1 MGP_BALBcJ_G0026862.1 mouse_genomes_project 2 163970706 163974723 + Cd40 protein_coding retained_intron MGP_BALBcJ_T0102448.1 MGP_BALBcJ_G0040264.1 mouse_genomes_project 2 172918488 172974484 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007330.1 MGP_BALBcJ_G0006006.1 mouse_genomes_project 2 147015508 147025087 + Gm14120 lincRNA lincRNA MGP_BALBcJ_T0098574.1 MGP_BALBcJ_G0036628.1 mouse_genomes_project 2 103947824 103947940 + n-R5s201 rRNA rRNA MGP_BALBcJ_T0055386.1 MGP_BALBcJ_G0025835.1 mouse_genomes_project 2 73942931 73949525 - MGP_BALBcJ_P0055386 Cyct protein_coding protein_coding MGP_BALBcJ_T0007250.1 MGP_BALBcJ_G0005942.1 mouse_genomes_project 2 93668363 93670869 + Gm13799 lincRNA lincRNA MGP_BALBcJ_T0054389.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32705403 32738049 - MGP_BALBcJ_P0054389 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054390.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32705403 32772521 - MGP_BALBcJ_P0054390 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054391.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32705407 32772704 - MGP_BALBcJ_P0054391 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054392.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32705407 32772504 - MGP_BALBcJ_P0054392 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054393.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32707333 32728816 - MGP_BALBcJ_P0054393 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054394.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32707333 32728816 - MGP_BALBcJ_P0054394 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054395.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32713413 32747502 - MGP_BALBcJ_P0054395 Ggta1 protein_coding protein_coding MGP_BALBcJ_T0054396.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32728817 32751235 - Ggta1 protein_coding processed_transcript MGP_BALBcJ_T0054397.1 MGP_BALBcJ_G0025629.1 mouse_genomes_project 2 32737929 32774395 - Ggta1 protein_coding processed_transcript MGP_BALBcJ_T0056318.1 MGP_BALBcJ_G0026160.1 mouse_genomes_project 2 99540845 99552061 - MGP_BALBcJ_P0056318 Rag1 protein_coding protein_coding MGP_BALBcJ_T0007101.1 MGP_BALBcJ_G0005824.1 mouse_genomes_project 2 873170 876488 - Gm13191 lincRNA lincRNA MGP_BALBcJ_T0055232.1 MGP_BALBcJ_G0025798.1 mouse_genomes_project 2 69277051 69351385 + Itga6 protein_coding processed_transcript MGP_BALBcJ_T0055233.1 MGP_BALBcJ_G0025798.1 mouse_genomes_project 2 69317169 69352074 + Itga6 protein_coding processed_transcript MGP_BALBcJ_T0055234.1 MGP_BALBcJ_G0025798.1 mouse_genomes_project 2 69317180 69387876 + MGP_BALBcJ_P0055234 Itga6 protein_coding protein_coding MGP_BALBcJ_T0055235.1 MGP_BALBcJ_G0025798.1 mouse_genomes_project 2 69317379 69389446 + MGP_BALBcJ_P0055235 Itga6 protein_coding protein_coding MGP_BALBcJ_T0055236.1 MGP_BALBcJ_G0025798.1 mouse_genomes_project 2 69369409 69370244 + Itga6 protein_coding processed_transcript MGP_BALBcJ_T0055237.1 MGP_BALBcJ_G0025798.1 mouse_genomes_project 2 69380485 69389511 + Itga6 protein_coding processed_transcript MGP_BALBcJ_T0013637.1 MGP_BALBcJ_G0011734.1 mouse_genomes_project 2 89139583 89139751 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055966.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88709794 88759072 + Celf1 protein_coding processed_transcript MGP_BALBcJ_T0055967.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88709809 88790927 + MGP_BALBcJ_P0055967 Celf1 protein_coding protein_coding MGP_BALBcJ_T0055968.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88709870 88769952 + Celf1 protein_coding processed_transcript MGP_BALBcJ_T0055969.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88709949 88772824 + Celf1 protein_coding processed_transcript MGP_BALBcJ_T0055970.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88711287 88789010 + MGP_BALBcJ_P0055970 Celf1 protein_coding protein_coding MGP_BALBcJ_T0055971.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88735568 88759134 + Celf1 protein_coding processed_transcript MGP_BALBcJ_T0055972.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88759063 88790920 + MGP_BALBcJ_P0055972 Celf1 protein_coding protein_coding MGP_BALBcJ_T0055973.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88769914 88790927 + MGP_BALBcJ_P0055973 Celf1 protein_coding protein_coding MGP_BALBcJ_T0055974.1 MGP_BALBcJ_G0026107.1 mouse_genomes_project 2 88783923 88784804 + Celf1 protein_coding processed_transcript MGP_BALBcJ_T0055741.1 MGP_BALBcJ_G0025954.1 mouse_genomes_project 2 84441414 84482392 - MGP_BALBcJ_P0055741 protein_coding protein_coding MGP_BALBcJ_T0013572.1 MGP_BALBcJ_G0011669.1 mouse_genomes_project 2 69908263 69908559 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013738.1 MGP_BALBcJ_G0011835.1 mouse_genomes_project 2 129757129 129757408 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058900.1 MGP_BALBcJ_G0026772.1 mouse_genomes_project 2 157437259 157442297 + MGP_BALBcJ_P0058900 Slc32a1 protein_coding protein_coding MGP_BALBcJ_T0057735.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129620022 129631559 + MGP_BALBcJ_P0057735 Cdc25b protein_coding protein_coding MGP_BALBcJ_T0057736.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129620031 129631561 + MGP_BALBcJ_P0057736 Cdc25b protein_coding protein_coding MGP_BALBcJ_T0057737.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129621231 129625000 + Cdc25b protein_coding retained_intron MGP_BALBcJ_T0057738.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129624431 129625184 + Cdc25b protein_coding retained_intron MGP_BALBcJ_T0057739.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129624824 129626474 + Cdc25b protein_coding retained_intron MGP_BALBcJ_T0057740.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129624894 129626361 + Cdc25b protein_coding retained_intron MGP_BALBcJ_T0057741.1 MGP_BALBcJ_G0026502.1 mouse_genomes_project 2 129625955 129627488 + Cdc25b protein_coding retained_intron MGP_BALBcJ_T0056627.1 MGP_BALBcJ_G0026247.1 mouse_genomes_project 2 109894214 109896040 - MGP_BALBcJ_P0056627 protein_coding protein_coding MGP_BALBcJ_T0054450.1 MGP_BALBcJ_G0025647.1 mouse_genomes_project 2 34064489 34067682 + MGP_BALBcJ_P0054450 Olfr348 protein_coding protein_coding MGP_BALBcJ_T0054451.1 MGP_BALBcJ_G0025647.1 mouse_genomes_project 2 34066740 34067682 + MGP_BALBcJ_P0054451 Olfr348 protein_coding protein_coding MGP_BALBcJ_T0101889.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172707110 172786615 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101890.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172708228 172786615 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101891.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172708989 172757661 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101892.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172712693 172786615 - transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0101893.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172713640 172718551 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101894.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172714373 172719102 - transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0101895.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172723894 172786615 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101896.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172723894 172786444 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101897.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172724921 172736608 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101898.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172724935 172786716 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101899.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172736269 172786580 - transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0101900.1 MGP_BALBcJ_G0039787.1 mouse_genomes_project 2 172743420 172786611 - transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0010371.1 MGP_BALBcJ_G0008496.1 mouse_genomes_project 2 24551327 24551427 + Gm24049 miRNA miRNA MGP_BALBcJ_T0059048.1 MGP_BALBcJ_G0026809.1 mouse_genomes_project 2 162889884 162915259 + MGP_BALBcJ_P0059048 Pabpc1l protein_coding protein_coding MGP_BALBcJ_T0059049.1 MGP_BALBcJ_G0026809.1 mouse_genomes_project 2 162895461 162906519 + Pabpc1l protein_coding processed_transcript MGP_BALBcJ_T0059050.1 MGP_BALBcJ_G0026809.1 mouse_genomes_project 2 162901205 162906746 + Pabpc1l protein_coding processed_transcript MGP_BALBcJ_T0059051.1 MGP_BALBcJ_G0026809.1 mouse_genomes_project 2 162912282 162915259 + Pabpc1l protein_coding processed_transcript MGP_BALBcJ_T0059052.1 MGP_BALBcJ_G0026809.1 mouse_genomes_project 2 162912730 162914888 + Pabpc1l protein_coding processed_transcript MGP_BALBcJ_T0056681.1 MGP_BALBcJ_G0026271.1 mouse_genomes_project 2 111722883 111737096 - MGP_BALBcJ_P0056681 Grem1 protein_coding protein_coding MGP_BALBcJ_T0058113.1 MGP_BALBcJ_G0026588.1 mouse_genomes_project 2 147303148 147308228 + MGP_BALBcJ_P0058113 Cstl1 protein_coding protein_coding MGP_BALBcJ_T0058114.1 MGP_BALBcJ_G0026588.1 mouse_genomes_project 2 147303151 147308173 + MGP_BALBcJ_P0058114 Cstl1 protein_coding protein_coding MGP_BALBcJ_T0058115.1 MGP_BALBcJ_G0026588.1 mouse_genomes_project 2 147303186 147308173 + MGP_BALBcJ_P0058115 Cstl1 protein_coding protein_coding MGP_BALBcJ_T0013825.1 MGP_BALBcJ_G0011922.1 mouse_genomes_project 2 157223042 157223331 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013532.1 MGP_BALBcJ_G0011629.1 mouse_genomes_project 2 54704461 54707406 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010410.1 MGP_BALBcJ_G0008535.1 mouse_genomes_project 2 78221562 78221648 - Mir684-1 miRNA miRNA MGP_BALBcJ_T0013679.1 MGP_BALBcJ_G0011776.1 mouse_genomes_project 2 104887821 104888426 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010450.1 MGP_BALBcJ_G0008575.1 mouse_genomes_project 2 151473671 151473731 + Mir5622 miRNA miRNA MGP_BALBcJ_T0013685.1 MGP_BALBcJ_G0011782.1 mouse_genomes_project 2 106658838 106659829 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056593.1 MGP_BALBcJ_G0026218.1 mouse_genomes_project 2 108589933 108888767 - MGP_BALBcJ_P0056593 Ano3 protein_coding protein_coding MGP_BALBcJ_T0056594.1 MGP_BALBcJ_G0026218.1 mouse_genomes_project 2 108622887 108888217 - Ano3 protein_coding retained_intron MGP_BALBcJ_T0056595.1 MGP_BALBcJ_G0026218.1 mouse_genomes_project 2 108647427 108699329 - MGP_BALBcJ_P0056595 Ano3 protein_coding protein_coding MGP_BALBcJ_T0059264.1 MGP_BALBcJ_G0026872.1 mouse_genomes_project 2 164511527 164689911 + MGP_BALBcJ_P0059264 Eya2 protein_coding protein_coding MGP_BALBcJ_T0059265.1 MGP_BALBcJ_G0026872.1 mouse_genomes_project 2 164572298 164689919 + MGP_BALBcJ_P0059265 Eya2 protein_coding protein_coding MGP_BALBcJ_T0059266.1 MGP_BALBcJ_G0026872.1 mouse_genomes_project 2 164572318 164632740 + Eya2 protein_coding processed_transcript MGP_BALBcJ_T0059267.1 MGP_BALBcJ_G0026872.1 mouse_genomes_project 2 164629924 164683552 + Eya2 protein_coding processed_transcript MGP_BALBcJ_T0059268.1 MGP_BALBcJ_G0026872.1 mouse_genomes_project 2 164679137 164684411 + Eya2 protein_coding processed_transcript MGP_BALBcJ_T0059269.1 MGP_BALBcJ_G0026872.1 mouse_genomes_project 2 164686965 164689458 + Eya2 protein_coding processed_transcript MGP_BALBcJ_T0100926.1 MGP_BALBcJ_G0038962.1 mouse_genomes_project 2 18899022 18899145 - Gm24886 snoRNA snoRNA MGP_BALBcJ_T0055751.1 MGP_BALBcJ_G0025964.1 mouse_genomes_project 2 84674439 84675378 - MGP_BALBcJ_P0055751 Olfr1105 protein_coding protein_coding MGP_BALBcJ_T0013459.1 MGP_BALBcJ_G0011556.1 mouse_genomes_project 2 29245783 29247189 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056629.1 MGP_BALBcJ_G0026249.1 mouse_genomes_project 2 109975931 109976894 - MGP_BALBcJ_P0056629 Olfr1309 protein_coding protein_coding MGP_BALBcJ_T0055908.1 MGP_BALBcJ_G0026090.1 mouse_genomes_project 2 87807107 87808034 - MGP_BALBcJ_P0055908 Olfr1264 protein_coding protein_coding MGP_BALBcJ_T0055875.1 MGP_BALBcJ_G0026070.1 mouse_genomes_project 2 87227651 87228596 - MGP_BALBcJ_P0055875 Olfr1240 protein_coding protein_coding MGP_BALBcJ_T0059160.1 MGP_BALBcJ_G0026854.1 mouse_genomes_project 2 163736204 163738929 - MGP_BALBcJ_P0059160 Neurl2 protein_coding protein_coding MGP_BALBcJ_T0057551.1 MGP_BALBcJ_G0026459.1 mouse_genomes_project 2 127371966 127397449 + MGP_BALBcJ_P0057551 Polr1b protein_coding protein_coding MGP_BALBcJ_T0057552.1 MGP_BALBcJ_G0026459.1 mouse_genomes_project 2 127371998 127391600 + MGP_BALBcJ_P0057552 Polr1b protein_coding protein_coding MGP_BALBcJ_T0057553.1 MGP_BALBcJ_G0026459.1 mouse_genomes_project 2 127386503 127389321 + Polr1b protein_coding processed_transcript MGP_BALBcJ_T0057554.1 MGP_BALBcJ_G0026459.1 mouse_genomes_project 2 127389485 127390028 + Polr1b protein_coding processed_transcript MGP_BALBcJ_T0013818.1 MGP_BALBcJ_G0011915.1 mouse_genomes_project 2 155563450 155564042 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011498.1 MGP_BALBcJ_G0009623.1 mouse_genomes_project 2 155149442 155149658 + Gm22316 misc_RNA misc_RNA MGP_BALBcJ_T0102449.1 MGP_BALBcJ_G0040265.1 mouse_genomes_project 2 176539263 176542188 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003894.1 MGP_BALBcJ_G0003483.1 mouse_genomes_project 2 17395426 17418342 - Gm17171 antisense antisense MGP_BALBcJ_T0055735.1 MGP_BALBcJ_G0025948.1 mouse_genomes_project 2 84224775 84225871 - MGP_BALBcJ_P0055735 Olfr1085 protein_coding protein_coding MGP_BALBcJ_T0010430.1 MGP_BALBcJ_G0008555.1 mouse_genomes_project 2 113645419 113645508 + Mir1951 miRNA miRNA MGP_BALBcJ_T0057045.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118773511 118789063 - MGP_BALBcJ_P0057045 Cdan1 protein_coding protein_coding MGP_BALBcJ_T0057046.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118773867 118789064 - MGP_BALBcJ_P0057046 Cdan1 protein_coding protein_coding MGP_BALBcJ_T0057047.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118775526 118893480 - Cdan1 protein_coding processed_transcript MGP_BALBcJ_T0057048.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118775961 118777853 - Cdan1 protein_coding processed_transcript MGP_BALBcJ_T0057049.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118779698 118782001 - Cdan1 protein_coding retained_intron MGP_BALBcJ_T0057050.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118783156 118785523 - Cdan1 protein_coding retained_intron MGP_BALBcJ_T0057051.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118785463 118786184 - Cdan1 protein_coding retained_intron MGP_BALBcJ_T0057052.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118786173 118789052 - Cdan1 protein_coding processed_transcript MGP_BALBcJ_T0057053.1 MGP_BALBcJ_G0026347.1 mouse_genomes_project 2 118787487 118789036 - Cdan1 protein_coding processed_transcript MGP_BALBcJ_T0010406.1 MGP_BALBcJ_G0008531.1 mouse_genomes_project 2 73235214 73235288 + Gm24574 miRNA miRNA MGP_BALBcJ_T0001076.1 MGP_BALBcJ_G0001004.1 mouse_genomes_project 2 66339727 66343227 + TEC TEC MGP_BALBcJ_T0013527.1 MGP_BALBcJ_G0011624.1 mouse_genomes_project 2 53218767 53220028 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058090.1 MGP_BALBcJ_G0026578.1 mouse_genomes_project 2 145628252 145630379 - MGP_BALBcJ_P0058090 Nkx2-4 protein_coding protein_coding MGP_BALBcJ_T0055380.1 MGP_BALBcJ_G0025831.1 mouse_genomes_project 2 73510412 73525373 - MGP_BALBcJ_P0055380 Ttc30a2 protein_coding protein_coding MGP_BALBcJ_T0055082.1 MGP_BALBcJ_G0025769.1 mouse_genomes_project 2 66692857 66792713 - MGP_BALBcJ_P0055082 Abcb11 protein_coding protein_coding MGP_BALBcJ_T0055083.1 MGP_BALBcJ_G0025769.1 mouse_genomes_project 2 66692864 66792715 - MGP_BALBcJ_P0055083 Abcb11 protein_coding protein_coding MGP_BALBcJ_T0055084.1 MGP_BALBcJ_G0025769.1 mouse_genomes_project 2 66692864 66792699 - MGP_BALBcJ_P0055084 Abcb11 protein_coding protein_coding MGP_BALBcJ_T0055085.1 MGP_BALBcJ_G0025769.1 mouse_genomes_project 2 66692885 66693654 - Abcb11 protein_coding processed_transcript MGP_BALBcJ_T0057911.1 MGP_BALBcJ_G0026537.1 mouse_genomes_project 2 135359969 135533581 + MGP_BALBcJ_P0057911 Slx4ip protein_coding protein_coding MGP_BALBcJ_T0057912.1 MGP_BALBcJ_G0026537.1 mouse_genomes_project 2 135360252 135471121 + MGP_BALBcJ_P0057912 Slx4ip protein_coding protein_coding MGP_BALBcJ_T0057913.1 MGP_BALBcJ_G0026537.1 mouse_genomes_project 2 135360359 135535574 + Slx4ip protein_coding processed_transcript MGP_BALBcJ_T0057914.1 MGP_BALBcJ_G0026537.1 mouse_genomes_project 2 135360919 135532201 + Slx4ip protein_coding processed_transcript MGP_BALBcJ_T0057915.1 MGP_BALBcJ_G0026537.1 mouse_genomes_project 2 135360919 135535574 + MGP_BALBcJ_P0057915 Slx4ip protein_coding protein_coding MGP_BALBcJ_T0057916.1 MGP_BALBcJ_G0026537.1 mouse_genomes_project 2 135373929 135533710 + MGP_BALBcJ_P0057916 Slx4ip protein_coding protein_coding MGP_BALBcJ_T0004088.1 MGP_BALBcJ_G0003619.1 mouse_genomes_project 2 134605336 134608492 + Gm14218 antisense antisense MGP_BALBcJ_T0059080.1 MGP_BALBcJ_G0026824.1 mouse_genomes_project 2 163278517 163293430 - MGP_BALBcJ_P0059080 Matn4 protein_coding protein_coding MGP_BALBcJ_T0059081.1 MGP_BALBcJ_G0026824.1 mouse_genomes_project 2 163278517 163293432 - MGP_BALBcJ_P0059081 Matn4 protein_coding protein_coding MGP_BALBcJ_T0059082.1 MGP_BALBcJ_G0026824.1 mouse_genomes_project 2 163278517 163293978 - MGP_BALBcJ_P0059082 Matn4 protein_coding protein_coding MGP_BALBcJ_T0059083.1 MGP_BALBcJ_G0026824.1 mouse_genomes_project 2 163278517 163293430 - MGP_BALBcJ_P0059083 Matn4 protein_coding protein_coding MGP_BALBcJ_T0059084.1 MGP_BALBcJ_G0026824.1 mouse_genomes_project 2 163282936 163293431 - Matn4 protein_coding retained_intron MGP_BALBcJ_T0101665.1 MGP_BALBcJ_G0039658.1 mouse_genomes_project 2 21544611 21545197 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0055178.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68461482 68515657 - MGP_BALBcJ_P0055178 Mettl8 protein_coding protein_coding MGP_BALBcJ_T0055179.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68461489 68552884 - MGP_BALBcJ_P0055179 Mettl8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055180.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68461489 68552884 - MGP_BALBcJ_P0055180 Mettl8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055181.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68461489 68552884 - MGP_BALBcJ_P0055181 Mettl8 protein_coding protein_coding MGP_BALBcJ_T0055182.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68463093 68470317 - MGP_BALBcJ_P0055182 Mettl8 protein_coding protein_coding MGP_BALBcJ_T0055183.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68463411 68478517 - MGP_BALBcJ_P0055183 Mettl8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055184.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68463978 68472968 - Mettl8 protein_coding retained_intron MGP_BALBcJ_T0055185.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68475232 68552873 - MGP_BALBcJ_P0055185 Mettl8 protein_coding protein_coding MGP_BALBcJ_T0055186.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68477391 68552884 - Mettl8 protein_coding retained_intron MGP_BALBcJ_T0055187.1 MGP_BALBcJ_G0025789.1 mouse_genomes_project 2 68490341 68515673 - Mettl8 protein_coding retained_intron MGP_BALBcJ_T0054273.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31698570 31790890 + MGP_BALBcJ_P0054273 Mapkap1 protein_coding protein_coding MGP_BALBcJ_T0054274.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31698668 31724942 + MGP_BALBcJ_P0054274 Mapkap1 protein_coding protein_coding MGP_BALBcJ_T0054275.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31698671 31772461 + Mapkap1 protein_coding processed_transcript MGP_BALBcJ_T0054276.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31698677 31916764 + MGP_BALBcJ_P0054276 Mapkap1 protein_coding protein_coding MGP_BALBcJ_T0054277.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31698692 31916748 + MGP_BALBcJ_P0054277 Mapkap1 protein_coding protein_coding MGP_BALBcJ_T0054278.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31731681 31826738 + Mapkap1 protein_coding processed_transcript MGP_BALBcJ_T0054279.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31737534 31791047 + MGP_BALBcJ_P0054279 Mapkap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054280.1 MGP_BALBcJ_G0025612.1 mouse_genomes_project 2 31912781 31917119 + Mapkap1 protein_coding processed_transcript MGP_BALBcJ_T0056076.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89068056 89244448 - MGP_BALBcJ_P0056076 1110051M20Rik protein_coding protein_coding MGP_BALBcJ_T0056077.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89071769 89244440 - MGP_BALBcJ_P0056077 1110051M20Rik protein_coding protein_coding MGP_BALBcJ_T0056078.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89075209 89076609 - 1110051M20Rik protein_coding processed_transcript MGP_BALBcJ_T0056079.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89098839 89244469 - 1110051M20Rik protein_coding processed_transcript MGP_BALBcJ_T0056080.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89182681 89244495 - 1110051M20Rik protein_coding processed_transcript MGP_BALBcJ_T0056081.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89218604 89244463 - 1110051M20Rik protein_coding processed_transcript MGP_BALBcJ_T0056082.1 MGP_BALBcJ_G0026119.1 mouse_genomes_project 2 89218653 89244530 - 1110051M20Rik protein_coding processed_transcript MGP_BALBcJ_T0013608.1 MGP_BALBcJ_G0011705.1 mouse_genomes_project 2 80990411 80991113 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004116.1 MGP_BALBcJ_G0003643.1 mouse_genomes_project 2 154301360 154311314 - Acss2os antisense antisense MGP_BALBcJ_T0007263.1 MGP_BALBcJ_G0005952.1 mouse_genomes_project 2 103612818 103615649 - Paupar lincRNA lincRNA MGP_BALBcJ_T0007193.1 MGP_BALBcJ_G0005896.1 mouse_genomes_project 2 61819541 61830622 - Gm13575 lincRNA lincRNA MGP_BALBcJ_T0102421.1 MGP_BALBcJ_G0040237.1 mouse_genomes_project 2 85723483 85724375 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007118.1 MGP_BALBcJ_G0005837.1 mouse_genomes_project 2 8327125 8331612 - Gm38171 lincRNA lincRNA MGP_BALBcJ_T0055118.1 MGP_BALBcJ_G0025777.1 mouse_genomes_project 2 67253147 67259267 + MGP_BALBcJ_P0055118 Phospho2 protein_coding protein_coding MGP_BALBcJ_T0055119.1 MGP_BALBcJ_G0025777.1 mouse_genomes_project 2 67253160 67260837 + MGP_BALBcJ_P0055119 Phospho2 protein_coding protein_coding MGP_BALBcJ_T0055120.1 MGP_BALBcJ_G0025777.1 mouse_genomes_project 2 67253174 67260837 + MGP_BALBcJ_P0055120 Phospho2 protein_coding protein_coding MGP_BALBcJ_T0055121.1 MGP_BALBcJ_G0025777.1 mouse_genomes_project 2 67253184 67256002 + Phospho2 protein_coding processed_transcript MGP_BALBcJ_T0055122.1 MGP_BALBcJ_G0025777.1 mouse_genomes_project 2 67253236 67263951 + Phospho2 protein_coding processed_transcript MGP_BALBcJ_T0055123.1 MGP_BALBcJ_G0025777.1 mouse_genomes_project 2 67254502 67260836 + MGP_BALBcJ_P0055123 Phospho2 protein_coding protein_coding MGP_BALBcJ_T0052269.1 MGP_BALBcJ_G0025279.1 mouse_genomes_project 2 352183 365783 - MGP_BALBcJ_P0052269 Meig1 protein_coding protein_coding MGP_BALBcJ_T0052270.1 MGP_BALBcJ_G0025279.1 mouse_genomes_project 2 352183 362154 - MGP_BALBcJ_P0052270 Meig1 protein_coding protein_coding MGP_BALBcJ_T0052271.1 MGP_BALBcJ_G0025279.1 mouse_genomes_project 2 352186 362176 - MGP_BALBcJ_P0052271 Meig1 protein_coding protein_coding MGP_BALBcJ_T0052272.1 MGP_BALBcJ_G0025279.1 mouse_genomes_project 2 352187 362264 - MGP_BALBcJ_P0052272 Meig1 protein_coding protein_coding MGP_BALBcJ_T0052273.1 MGP_BALBcJ_G0025279.1 mouse_genomes_project 2 352250 361716 - MGP_BALBcJ_P0052273 Meig1 protein_coding protein_coding MGP_BALBcJ_T0052274.1 MGP_BALBcJ_G0025279.1 mouse_genomes_project 2 352407 365729 - MGP_BALBcJ_P0052274 Meig1 protein_coding protein_coding MGP_BALBcJ_T0013427.1 MGP_BALBcJ_G0011524.1 mouse_genomes_project 2 15836238 15838506 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007391.1 MGP_BALBcJ_G0006058.1 mouse_genomes_project 2 168513527 168537901 + Gm14249 lincRNA lincRNA MGP_BALBcJ_T0057394.1 MGP_BALBcJ_G0026419.1 mouse_genomes_project 2 124949416 125001499 + Usp8 protein_coding processed_transcript MGP_BALBcJ_T0057395.1 MGP_BALBcJ_G0026419.1 mouse_genomes_project 2 124949431 125001548 + MGP_BALBcJ_P0057395 Usp8 protein_coding protein_coding MGP_BALBcJ_T0057396.1 MGP_BALBcJ_G0026419.1 mouse_genomes_project 2 124949448 125001541 + MGP_BALBcJ_P0057396 Usp8 protein_coding protein_coding MGP_BALBcJ_T0017723.1 MGP_BALBcJ_G0015350.1 mouse_genomes_project 2 28392600 28398340 - D330023K18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017724.1 MGP_BALBcJ_G0015350.1 mouse_genomes_project 2 28396689 28398340 - D330023K18Rik processed_transcript processed_transcript MGP_BALBcJ_T0007148.1 MGP_BALBcJ_G0005859.1 mouse_genomes_project 2 27759484 27763786 + Gm14487 lincRNA lincRNA MGP_BALBcJ_T0059582.1 MGP_BALBcJ_G0026943.1 mouse_genomes_project 2 173558482 173572689 - MGP_BALBcJ_P0059582 Ctsz protein_coding protein_coding MGP_BALBcJ_T0017763.1 MGP_BALBcJ_G0015379.1 mouse_genomes_project 2 86921515 86926304 - Gm13764 processed_transcript processed_transcript MGP_BALBcJ_T0003977.1 MGP_BALBcJ_G0003546.1 mouse_genomes_project 2 64775692 64870541 - Gm13599 antisense antisense MGP_BALBcJ_T0056871.1 MGP_BALBcJ_G0026319.1 mouse_genomes_project 2 117591665 117632408 + MGP_BALBcJ_P0056871 Chp1 protein_coding protein_coding MGP_BALBcJ_T0056872.1 MGP_BALBcJ_G0026319.1 mouse_genomes_project 2 117591756 117615819 + Chp1 protein_coding retained_intron MGP_BALBcJ_T0056873.1 MGP_BALBcJ_G0026319.1 mouse_genomes_project 2 117591795 117629696 + MGP_BALBcJ_P0056873 Chp1 protein_coding protein_coding MGP_BALBcJ_T0056874.1 MGP_BALBcJ_G0026319.1 mouse_genomes_project 2 117610644 117630799 + Chp1 protein_coding retained_intron MGP_BALBcJ_T0053037.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411642 - MGP_BALBcJ_P0053037 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053038.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411550 - MGP_BALBcJ_P0053038 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053039.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411550 - MGP_BALBcJ_P0053039 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053040.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411575 - MGP_BALBcJ_P0053040 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053041.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411575 - MGP_BALBcJ_P0053041 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053042.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411550 - MGP_BALBcJ_P0053042 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053043.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411550 - MGP_BALBcJ_P0053043 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053044.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381661 22411575 - MGP_BALBcJ_P0053044 Grin1 protein_coding protein_coding MGP_BALBcJ_T0053045.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22381837 22395723 - Grin1 protein_coding processed_transcript MGP_BALBcJ_T0053046.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22382538 22387160 - Grin1 protein_coding processed_transcript MGP_BALBcJ_T0053047.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22395418 22397472 - Grin1 protein_coding processed_transcript MGP_BALBcJ_T0053048.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22395521 22397769 - Grin1 protein_coding processed_transcript MGP_BALBcJ_T0053049.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22403255 22411581 - Grin1 protein_coding processed_transcript MGP_BALBcJ_T0053050.1 MGP_BALBcJ_G0025411.1 mouse_genomes_project 2 22406855 22411618 - Grin1 protein_coding processed_transcript MGP_BALBcJ_T0013401.1 MGP_BALBcJ_G0011498.1 mouse_genomes_project 2 7963948 7964786 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052865.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21422255 21450375 + MGP_BALBcJ_P0052865 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052866.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21422285 21471604 + MGP_BALBcJ_P0052866 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052867.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21441432 21465379 + MGP_BALBcJ_P0052867 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052868.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21441435 21450528 + MGP_BALBcJ_P0052868 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052869.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21441436 21453437 + Psd4 protein_coding processed_transcript MGP_BALBcJ_T0052870.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21441453 21450422 + MGP_BALBcJ_P0052870 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052871.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21442669 21450708 + MGP_BALBcJ_P0052871 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052872.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21442717 21464850 + MGP_BALBcJ_P0052872 Psd4 protein_coding protein_coding MGP_BALBcJ_T0052873.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21457685 21459902 + MGP_BALBcJ_P0052873 Psd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052874.1 MGP_BALBcJ_G0025382.1 mouse_genomes_project 2 21462278 21463657 + Psd4 protein_coding retained_intron MGP_BALBcJ_T0058933.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159576891 159608093 + MGP_BALBcJ_P0058933 Plcg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058934.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159576901 159621351 + MGP_BALBcJ_P0058934 Plcg1 protein_coding protein_coding MGP_BALBcJ_T0058935.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159577290 159593479 + MGP_BALBcJ_P0058935 Plcg1 protein_coding protein_coding MGP_BALBcJ_T0058936.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159577324 159608877 + MGP_BALBcJ_P0058936 Plcg1 protein_coding protein_coding MGP_BALBcJ_T0058937.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159586577 159608097 + Plcg1 protein_coding processed_transcript MGP_BALBcJ_T0058939.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159598077 159607746 + Plcg1 protein_coding retained_intron MGP_BALBcJ_T0058940.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159598142 159604498 + Plcg1 protein_coding retained_intron MGP_BALBcJ_T0058941.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159599657 159600455 + Plcg1 protein_coding retained_intron MGP_BALBcJ_T0058942.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159600137 159600760 + Plcg1 protein_coding retained_intron MGP_BALBcJ_T0058943.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159600162 159605038 + Plcg1 protein_coding processed_transcript MGP_BALBcJ_T0058944.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159600496 159602738 + Plcg1 protein_coding retained_intron MGP_BALBcJ_T0058945.1 MGP_BALBcJ_G0026781.1 mouse_genomes_project 2 159605708 159607808 + MGP_BALBcJ_P0058945 Plcg1 protein_coding protein_coding MGP_BALBcJ_T0011471.1 MGP_BALBcJ_G0009596.1 mouse_genomes_project 2 31101788 31102158 + Nron misc_RNA misc_RNA MGP_BALBcJ_T0056747.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116412443 116452800 + MGP_BALBcJ_P0056747 Eif2ak4 protein_coding protein_coding MGP_BALBcJ_T0056748.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116412534 116500293 + MGP_BALBcJ_P0056748 Eif2ak4 protein_coding protein_coding MGP_BALBcJ_T0056749.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116412672 116500285 + MGP_BALBcJ_P0056749 Eif2ak4 protein_coding protein_coding MGP_BALBcJ_T0056750.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116412937 116500283 + MGP_BALBcJ_P0056750 Eif2ak4 protein_coding protein_coding MGP_BALBcJ_T0056751.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116412937 116500282 + MGP_BALBcJ_P0056751 Eif2ak4 protein_coding protein_coding MGP_BALBcJ_T0056752.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116464304 116477288 + MGP_BALBcJ_P0056752 Eif2ak4 protein_coding protein_coding MGP_BALBcJ_T0056753.1 MGP_BALBcJ_G0026288.1 mouse_genomes_project 2 116482112 116487141 + Eif2ak4 protein_coding processed_transcript MGP_BALBcJ_T0010370.1 MGP_BALBcJ_G0008495.1 mouse_genomes_project 2 23721256 23721314 - Mir126b miRNA miRNA MGP_BALBcJ_T0010318.1 MGP_BALBcJ_G0008443.1 mouse_genomes_project 2 7490362 7490456 + Mir466f-1 miRNA miRNA MGP_BALBcJ_T0059126.1 MGP_BALBcJ_G0026841.1 mouse_genomes_project 2 163558379 163569234 - MGP_BALBcJ_P0059126 Wfdc11 protein_coding protein_coding MGP_BALBcJ_T0059127.1 MGP_BALBcJ_G0026841.1 mouse_genomes_project 2 163558522 163561041 - MGP_BALBcJ_P0059127 Wfdc11 protein_coding protein_coding MGP_BALBcJ_T0059828.1 MGP_BALBcJ_G0026996.1 mouse_genomes_project 2 180689354 180705719 + MGP_BALBcJ_P0059828 Zgpat protein_coding protein_coding MGP_BALBcJ_T0059829.1 MGP_BALBcJ_G0026996.1 mouse_genomes_project 2 180689831 180705707 + MGP_BALBcJ_P0059829 Zgpat protein_coding protein_coding MGP_BALBcJ_T0059830.1 MGP_BALBcJ_G0026996.1 mouse_genomes_project 2 180689849 180708553 + MGP_BALBcJ_P0059830 Zgpat protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059831.1 MGP_BALBcJ_G0026996.1 mouse_genomes_project 2 180689878 180708551 + Zgpat protein_coding retained_intron MGP_BALBcJ_T0059832.1 MGP_BALBcJ_G0026996.1 mouse_genomes_project 2 180703318 180704744 + Zgpat protein_coding retained_intron MGP_BALBcJ_T0059833.1 MGP_BALBcJ_G0026996.1 mouse_genomes_project 2 180704563 180705663 + MGP_BALBcJ_P0059833 Zgpat protein_coding protein_coding MGP_BALBcJ_T0055833.1 MGP_BALBcJ_G0026034.1 mouse_genomes_project 2 86557512 86558439 - MGP_BALBcJ_P0055833 Olfr1198 protein_coding protein_coding MGP_BALBcJ_T0007360.1 MGP_BALBcJ_G0006032.1 mouse_genomes_project 2 162020048 162023267 - Gm14254 lincRNA lincRNA MGP_BALBcJ_T0057806.1 MGP_BALBcJ_G0026515.1 mouse_genomes_project 2 130687913 130698647 - MGP_BALBcJ_P0057806 Tmem230 protein_coding protein_coding MGP_BALBcJ_T0057807.1 MGP_BALBcJ_G0026515.1 mouse_genomes_project 2 130687913 130698609 - MGP_BALBcJ_P0057807 Tmem230 protein_coding protein_coding MGP_BALBcJ_T0057808.1 MGP_BALBcJ_G0026515.1 mouse_genomes_project 2 130687913 130698494 - MGP_BALBcJ_P0057808 Tmem230 protein_coding protein_coding MGP_BALBcJ_T0057809.1 MGP_BALBcJ_G0026515.1 mouse_genomes_project 2 130687915 130698628 - MGP_BALBcJ_P0057809 Tmem230 protein_coding protein_coding MGP_BALBcJ_T0057810.1 MGP_BALBcJ_G0026515.1 mouse_genomes_project 2 130696159 130698599 - Tmem230 protein_coding processed_transcript MGP_BALBcJ_T0057811.1 MGP_BALBcJ_G0026515.1 mouse_genomes_project 2 130696691 130698596 - Tmem230 protein_coding retained_intron MGP_BALBcJ_T0053543.1 MGP_BALBcJ_G0025503.1 mouse_genomes_project 2 25866215 25874071 - MGP_BALBcJ_P0053543 Spaca9 protein_coding protein_coding MGP_BALBcJ_T0053544.1 MGP_BALBcJ_G0025503.1 mouse_genomes_project 2 25866219 25874103 - MGP_BALBcJ_P0053544 Spaca9 protein_coding protein_coding MGP_BALBcJ_T0053545.1 MGP_BALBcJ_G0025503.1 mouse_genomes_project 2 25867147 25874147 - Spaca9 protein_coding processed_transcript MGP_BALBcJ_T0053546.1 MGP_BALBcJ_G0025503.1 mouse_genomes_project 2 25867842 25874094 - Spaca9 protein_coding processed_transcript MGP_BALBcJ_T0055728.1 MGP_BALBcJ_G0025942.1 mouse_genomes_project 2 84004911 84005853 - MGP_BALBcJ_P0055728 Olfr1061 protein_coding protein_coding MGP_BALBcJ_T0003886.1 MGP_BALBcJ_G0003476.1 mouse_genomes_project 2 11789532 11817230 - Gm10848 antisense antisense MGP_BALBcJ_T0007137.1 MGP_BALBcJ_G0005851.1 mouse_genomes_project 2 22420413 22425463 - AA543186 lincRNA lincRNA MGP_BALBcJ_T0010322.1 MGP_BALBcJ_G0008447.1 mouse_genomes_project 2 7491487 7491591 + Gm23578 miRNA miRNA MGP_BALBcJ_T0056699.1 MGP_BALBcJ_G0026278.1 mouse_genomes_project 2 112487374 112624140 - MGP_BALBcJ_P0056699 Dph6 protein_coding protein_coding MGP_BALBcJ_T0056700.1 MGP_BALBcJ_G0026278.1 mouse_genomes_project 2 112487602 112624174 - MGP_BALBcJ_P0056700 Dph6 protein_coding protein_coding MGP_BALBcJ_T0056701.1 MGP_BALBcJ_G0026278.1 mouse_genomes_project 2 112489095 112516863 - Dph6 protein_coding processed_transcript MGP_BALBcJ_T0056702.1 MGP_BALBcJ_G0026278.1 mouse_genomes_project 2 112492177 112624251 - Dph6 protein_coding retained_intron MGP_BALBcJ_T0056703.1 MGP_BALBcJ_G0026278.1 mouse_genomes_project 2 112611454 112624192 - Dph6 protein_coding retained_intron MGP_BALBcJ_T0059882.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180913843 180924550 - MGP_BALBcJ_P0059882 Zfp512b protein_coding protein_coding MGP_BALBcJ_T0059883.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180913845 180922667 - MGP_BALBcJ_P0059883 Zfp512b protein_coding protein_coding MGP_BALBcJ_T0059884.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180916330 180918144 - Zfp512b protein_coding retained_intron MGP_BALBcJ_T0059885.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180916918 180918050 - MGP_BALBcJ_P0059885 Zfp512b protein_coding protein_coding MGP_BALBcJ_T0059886.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180916924 180918102 - MGP_BALBcJ_P0059886 Zfp512b protein_coding protein_coding MGP_BALBcJ_T0059887.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180918461 180919393 - Zfp512b protein_coding retained_intron MGP_BALBcJ_T0059888.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180918857 180920487 - MGP_BALBcJ_P0059888 Zfp512b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059889.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180919813 180921034 - Zfp512b protein_coding processed_transcript MGP_BALBcJ_T0059890.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180921770 180924505 - Zfp512b protein_coding processed_transcript MGP_BALBcJ_T0059891.1 MGP_BALBcJ_G0027003.1 mouse_genomes_project 2 180922269 180924550 - MGP_BALBcJ_P0059891 Zfp512b protein_coding protein_coding MGP_BALBcJ_T0004104.1 MGP_BALBcJ_G0003632.1 mouse_genomes_project 2 145911344 145912226 - AI646519 antisense antisense MGP_BALBcJ_T0101674.1 MGP_BALBcJ_G0039666.1 mouse_genomes_project 2 148942137 148942817 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101675.1 MGP_BALBcJ_G0039666.1 mouse_genomes_project 2 148942370 148943126 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0059155.1 MGP_BALBcJ_G0026851.1 mouse_genomes_project 2 163703370 163722412 + MGP_BALBcJ_P0059155 Zswim3 protein_coding protein_coding MGP_BALBcJ_T0056608.1 MGP_BALBcJ_G0026228.1 mouse_genomes_project 2 109257184 109257900 + MGP_BALBcJ_P0056608 protein_coding protein_coding MGP_BALBcJ_T0004056.1 MGP_BALBcJ_G0003598.1 mouse_genomes_project 2 120933627 120938722 - Bloc1s6os antisense antisense MGP_BALBcJ_T0055499.1 MGP_BALBcJ_G0025852.1 mouse_genomes_project 2 77215837 77253591 + MGP_BALBcJ_P0055499 Ssfa2 protein_coding protein_coding MGP_BALBcJ_T0055500.1 MGP_BALBcJ_G0025852.1 mouse_genomes_project 2 77215911 77253591 + MGP_BALBcJ_P0055500 Ssfa2 protein_coding protein_coding MGP_BALBcJ_T0055501.1 MGP_BALBcJ_G0025852.1 mouse_genomes_project 2 77215940 77253591 + MGP_BALBcJ_P0055501 Ssfa2 protein_coding protein_coding MGP_BALBcJ_T0055502.1 MGP_BALBcJ_G0025852.1 mouse_genomes_project 2 77215946 77216931 + Ssfa2 protein_coding processed_transcript MGP_BALBcJ_T0055503.1 MGP_BALBcJ_G0025852.1 mouse_genomes_project 2 77219678 77253591 + Ssfa2 protein_coding processed_transcript MGP_BALBcJ_T0055516.1 MGP_BALBcJ_G0025856.1 mouse_genomes_project 2 77903056 77912396 + Dnajc10 protein_coding processed_transcript MGP_BALBcJ_T0055517.1 MGP_BALBcJ_G0025856.1 mouse_genomes_project 2 77903056 77944142 + MGP_BALBcJ_P0055517 Dnajc10 protein_coding protein_coding MGP_BALBcJ_T0055518.1 MGP_BALBcJ_G0025856.1 mouse_genomes_project 2 77921123 77923484 + Dnajc10 protein_coding processed_transcript MGP_BALBcJ_T0055519.1 MGP_BALBcJ_G0025856.1 mouse_genomes_project 2 77923383 77930643 + Dnajc10 protein_coding processed_transcript MGP_BALBcJ_T0055520.1 MGP_BALBcJ_G0025856.1 mouse_genomes_project 2 77937752 77941040 + Dnajc10 protein_coding processed_transcript MGP_BALBcJ_T0017712.1 MGP_BALBcJ_G0015342.1 mouse_genomes_project 2 23585540 23586730 + Gm13568 processed_transcript processed_transcript MGP_BALBcJ_T0055693.1 MGP_BALBcJ_G0025908.1 mouse_genomes_project 2 83289809 83290745 - MGP_BALBcJ_P0055693 Olfr1012 protein_coding protein_coding MGP_BALBcJ_T0010350.1 MGP_BALBcJ_G0008475.1 mouse_genomes_project 2 7519294 7519375 + Mir466h miRNA miRNA MGP_BALBcJ_T0007302.1 MGP_BALBcJ_G0005984.1 mouse_genomes_project 2 126687118 126688032 + Gm14010 lincRNA lincRNA MGP_BALBcJ_T0010460.1 MGP_BALBcJ_G0008585.1 mouse_genomes_project 2 161923820 161923886 + Mir7003 miRNA miRNA MGP_BALBcJ_T0057568.1 MGP_BALBcJ_G0026463.1 mouse_genomes_project 2 127573700 127584061 - MGP_BALBcJ_P0057568 Il1a protein_coding protein_coding MGP_BALBcJ_T0011477.1 MGP_BALBcJ_G0009602.1 mouse_genomes_project 2 42449305 42449382 + Gm27645 misc_RNA misc_RNA MGP_BALBcJ_T0013462.1 MGP_BALBcJ_G0011559.1 mouse_genomes_project 2 29679426 29680084 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055840.1 MGP_BALBcJ_G0026041.1 mouse_genomes_project 2 86665948 86668374 + MGP_BALBcJ_P0055840 Olfr1206 protein_coding protein_coding MGP_BALBcJ_T0055874.1 MGP_BALBcJ_G0026069.1 mouse_genomes_project 2 87206854 87207772 - MGP_BALBcJ_P0055874 Olfr1239 protein_coding protein_coding MGP_BALBcJ_T0013499.1 MGP_BALBcJ_G0011596.1 mouse_genomes_project 2 43185523 43186522 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054243.1 MGP_BALBcJ_G0025606.1 mouse_genomes_project 2 30497085 30528736 + MGP_BALBcJ_P0054243 Angptl2 protein_coding protein_coding MGP_BALBcJ_T0054244.1 MGP_BALBcJ_G0025606.1 mouse_genomes_project 2 30497089 30525538 + Angptl2 protein_coding retained_intron MGP_BALBcJ_T0054245.1 MGP_BALBcJ_G0025606.1 mouse_genomes_project 2 30497114 30511141 + Angptl2 protein_coding retained_intron MGP_BALBcJ_T0054246.1 MGP_BALBcJ_G0025606.1 mouse_genomes_project 2 30497133 30523412 + MGP_BALBcJ_P0054246 Angptl2 protein_coding protein_coding MGP_BALBcJ_T0055680.1 MGP_BALBcJ_G0025895.1 mouse_genomes_project 2 82860472 82870576 - MGP_BALBcJ_P0055680 protein_coding protein_coding MGP_BALBcJ_T0059783.1 MGP_BALBcJ_G0026990.1 mouse_genomes_project 2 180536398 180539240 + MGP_BALBcJ_P0059783 BC051628 protein_coding protein_coding MGP_BALBcJ_T0059784.1 MGP_BALBcJ_G0026990.1 mouse_genomes_project 2 180536422 180538835 + MGP_BALBcJ_P0059784 BC051628 protein_coding protein_coding MGP_BALBcJ_T0001063.1 MGP_BALBcJ_G0000991.1 mouse_genomes_project 2 35299186 35303136 - TEC TEC MGP_BALBcJ_T0055396.1 MGP_BALBcJ_G0025838.1 mouse_genomes_project 2 74211813 74229789 - MGP_BALBcJ_P0055396 Prkra protein_coding protein_coding MGP_BALBcJ_T0055397.1 MGP_BALBcJ_G0025838.1 mouse_genomes_project 2 74218568 74222507 - Prkra protein_coding processed_transcript MGP_BALBcJ_T0007192.1 MGP_BALBcJ_G0005895.1 mouse_genomes_project 2 59867374 59871087 - Gm13564 lincRNA lincRNA MGP_BALBcJ_T0056126.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89533797 89730114 + MGP_BALBcJ_P0056126 Ambra1 protein_coding protein_coding MGP_BALBcJ_T0056127.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89533801 89730113 + MGP_BALBcJ_P0056127 Ambra1 protein_coding protein_coding MGP_BALBcJ_T0056128.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89533845 89621160 + Ambra1 protein_coding processed_transcript MGP_BALBcJ_T0056129.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89533845 89621160 + Ambra1 protein_coding processed_transcript MGP_BALBcJ_T0056130.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89533847 89730113 + MGP_BALBcJ_P0056130 Ambra1 protein_coding protein_coding MGP_BALBcJ_T0056131.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89533888 89730114 + MGP_BALBcJ_P0056131 Ambra1 protein_coding protein_coding MGP_BALBcJ_T0056132.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89570458 89730114 + MGP_BALBcJ_P0056132 Ambra1 protein_coding protein_coding MGP_BALBcJ_T0056133.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89584612 89635139 + Ambra1 protein_coding processed_transcript MGP_BALBcJ_T0056134.1 MGP_BALBcJ_G0026127.1 mouse_genomes_project 2 89621858 89635972 + Ambra1 protein_coding processed_transcript MGP_BALBcJ_T0054462.1 MGP_BALBcJ_G0025658.1 mouse_genomes_project 2 34296893 34297886 - MGP_BALBcJ_P0054462 Olfr358 protein_coding protein_coding MGP_BALBcJ_T0057483.1 MGP_BALBcJ_G0026439.1 mouse_genomes_project 2 125831151 125843625 - MGP_BALBcJ_P0057483 Zfp661 protein_coding protein_coding MGP_BALBcJ_T0057484.1 MGP_BALBcJ_G0026439.1 mouse_genomes_project 2 125832026 125841212 - MGP_BALBcJ_P0057484 Zfp661 protein_coding protein_coding MGP_BALBcJ_T0057485.1 MGP_BALBcJ_G0026439.1 mouse_genomes_project 2 125832033 125841220 - MGP_BALBcJ_P0057485 Zfp661 protein_coding protein_coding MGP_BALBcJ_T0057486.1 MGP_BALBcJ_G0026439.1 mouse_genomes_project 2 125833428 125838045 - MGP_BALBcJ_P0057486 Zfp661 protein_coding protein_coding MGP_BALBcJ_T0100931.1 MGP_BALBcJ_G0038967.1 mouse_genomes_project 2 24055229 24055303 + Gm23969 snoRNA snoRNA MGP_BALBcJ_T0058156.1 MGP_BALBcJ_G0026607.1 mouse_genomes_project 2 149373107 149398122 + MGP_BALBcJ_P0058156 Entpd6 protein_coding protein_coding MGP_BALBcJ_T0058157.1 MGP_BALBcJ_G0026607.1 mouse_genomes_project 2 149373146 149389811 + Entpd6 protein_coding retained_intron MGP_BALBcJ_T0058158.1 MGP_BALBcJ_G0026607.1 mouse_genomes_project 2 149373157 149390259 + Entpd6 protein_coding processed_transcript MGP_BALBcJ_T0058159.1 MGP_BALBcJ_G0026607.1 mouse_genomes_project 2 149373236 149377290 + Entpd6 protein_coding processed_transcript MGP_BALBcJ_T0010422.1 MGP_BALBcJ_G0008547.1 mouse_genomes_project 2 92098690 92098790 - Mir670 miRNA miRNA MGP_BALBcJ_T0052296.1 MGP_BALBcJ_G0025283.1 mouse_genomes_project 2 451597 462504 + MGP_BALBcJ_P0052296 Cdnf protein_coding unknown_likely_coding MGP_BALBcJ_T0052297.1 MGP_BALBcJ_G0025283.1 mouse_genomes_project 2 451612 462337 + Cdnf protein_coding processed_transcript MGP_BALBcJ_T0052298.1 MGP_BALBcJ_G0025283.1 mouse_genomes_project 2 451647 464891 + MGP_BALBcJ_P0052298 Cdnf protein_coding protein_coding MGP_BALBcJ_T0052299.1 MGP_BALBcJ_G0025283.1 mouse_genomes_project 2 452466 462415 + Cdnf protein_coding processed_transcript MGP_BALBcJ_T0013816.1 MGP_BALBcJ_G0011913.1 mouse_genomes_project 2 155178224 155178488 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013404.1 MGP_BALBcJ_G0011501.1 mouse_genomes_project 2 8427010 8428007 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059491.1 MGP_BALBcJ_G0026920.1 mouse_genomes_project 2 171478413 171514694 + MGP_BALBcJ_P0059491 Cass4 protein_coding protein_coding MGP_BALBcJ_T0059492.1 MGP_BALBcJ_G0026920.1 mouse_genomes_project 2 171478440 171518891 + MGP_BALBcJ_P0059492 Cass4 protein_coding protein_coding MGP_BALBcJ_T0059493.1 MGP_BALBcJ_G0026920.1 mouse_genomes_project 2 171478519 171517994 + MGP_BALBcJ_P0059493 Cass4 protein_coding protein_coding MGP_BALBcJ_T0059494.1 MGP_BALBcJ_G0026920.1 mouse_genomes_project 2 171478589 171517777 + MGP_BALBcJ_P0059494 Cass4 protein_coding unknown_likely_coding MGP_BALBcJ_T0059790.1 MGP_BALBcJ_G0026992.1 mouse_genomes_project 2 180568365 180604392 - MGP_BALBcJ_P0059790 Gmeb2 protein_coding protein_coding MGP_BALBcJ_T0059791.1 MGP_BALBcJ_G0026992.1 mouse_genomes_project 2 180570701 180595156 - MGP_BALBcJ_P0059791 Gmeb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059792.1 MGP_BALBcJ_G0026992.1 mouse_genomes_project 2 180571691 180573048 - Gmeb2 protein_coding retained_intron MGP_BALBcJ_T0059793.1 MGP_BALBcJ_G0026992.1 mouse_genomes_project 2 180572834 180611481 - MGP_BALBcJ_P0059793 Gmeb2 protein_coding protein_coding MGP_BALBcJ_T0059794.1 MGP_BALBcJ_G0026992.1 mouse_genomes_project 2 180572854 180604373 - MGP_BALBcJ_P0059794 Gmeb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059795.1 MGP_BALBcJ_G0026992.1 mouse_genomes_project 2 180582504 180604388 - Gmeb2 protein_coding retained_intron MGP_BALBcJ_T0055702.1 MGP_BALBcJ_G0025917.1 mouse_genomes_project 2 83443943 83444927 - MGP_BALBcJ_P0055702 Olfr1024 protein_coding protein_coding MGP_BALBcJ_T0055713.1 MGP_BALBcJ_G0025927.1 mouse_genomes_project 2 83723161 83724462 - MGP_BALBcJ_P0055713 protein_coding protein_coding MGP_BALBcJ_T0010355.1 MGP_BALBcJ_G0008480.1 mouse_genomes_project 2 7522521 7522648 + Mir669i miRNA miRNA MGP_BALBcJ_T0058503.1 MGP_BALBcJ_G0026705.1 mouse_genomes_project 2 153991116 154005416 + Dynlrb1 protein_coding processed_transcript MGP_BALBcJ_T0058504.1 MGP_BALBcJ_G0026705.1 mouse_genomes_project 2 153991118 154005421 + MGP_BALBcJ_P0058504 Dynlrb1 protein_coding protein_coding MGP_BALBcJ_T0058505.1 MGP_BALBcJ_G0026705.1 mouse_genomes_project 2 153991191 154005279 + MGP_BALBcJ_P0058505 Dynlrb1 protein_coding protein_coding MGP_BALBcJ_T0058506.1 MGP_BALBcJ_G0026705.1 mouse_genomes_project 2 153991394 154005224 + Dynlrb1 protein_coding processed_transcript MGP_BALBcJ_T0056154.1 MGP_BALBcJ_G0026132.1 mouse_genomes_project 2 89794241 89837927 - MGP_BALBcJ_P0056154 Creb3l1 protein_coding protein_coding MGP_BALBcJ_T0003938.1 MGP_BALBcJ_G0003517.1 mouse_genomes_project 2 30732595 30735001 + Gm13536 antisense antisense MGP_BALBcJ_T0059633.1 MGP_BALBcJ_G0026959.1 mouse_genomes_project 2 179341228 179366589 + MGP_BALBcJ_P0059633 Ss18l1 protein_coding protein_coding MGP_BALBcJ_T0057198.1 MGP_BALBcJ_G0026369.1 mouse_genomes_project 2 119501557 119506701 + MGP_BALBcJ_P0057198 Hypk protein_coding protein_coding MGP_BALBcJ_T0057199.1 MGP_BALBcJ_G0026369.1 mouse_genomes_project 2 119504886 119506627 + Hypk protein_coding retained_intron MGP_BALBcJ_T0057200.1 MGP_BALBcJ_G0026369.1 mouse_genomes_project 2 119505156 119506863 + MGP_BALBcJ_P0057200 Hypk protein_coding protein_coding MGP_BALBcJ_T0057201.1 MGP_BALBcJ_G0026369.1 mouse_genomes_project 2 119505317 119506500 + Hypk protein_coding retained_intron MGP_BALBcJ_T0057202.1 MGP_BALBcJ_G0026369.1 mouse_genomes_project 2 119505327 119506554 + Hypk protein_coding processed_transcript MGP_BALBcJ_T0055164.1 MGP_BALBcJ_G0025786.1 mouse_genomes_project 2 68156451 68157312 - MGP_BALBcJ_P0055164 Gm26558 protein_coding protein_coding MGP_BALBcJ_T0055824.1 MGP_BALBcJ_G0026026.1 mouse_genomes_project 2 86269934 86270870 + MGP_BALBcJ_P0055824 Olfr1184 protein_coding protein_coding MGP_BALBcJ_T0058266.1 MGP_BALBcJ_G0026634.1 mouse_genomes_project 2 151007672 151010746 - MGP_BALBcJ_P0058266 Zcchc3 protein_coding protein_coding MGP_BALBcJ_T0013542.1 MGP_BALBcJ_G0011639.1 mouse_genomes_project 2 57366227 57366621 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056895.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117814206 117838155 - MGP_BALBcJ_P0056895 Rpap1 protein_coding protein_coding MGP_BALBcJ_T0056896.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117814860 117838179 - MGP_BALBcJ_P0056896 Rpap1 protein_coding protein_coding MGP_BALBcJ_T0056897.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117814861 117838188 - MGP_BALBcJ_P0056897 Rpap1 protein_coding protein_coding MGP_BALBcJ_T0056898.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117814864 117838151 - MGP_BALBcJ_P0056898 Rpap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056899.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117814867 117838171 - MGP_BALBcJ_P0056899 Rpap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056900.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117818069 117838170 - Rpap1 protein_coding retained_intron MGP_BALBcJ_T0056901.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117828829 117838165 - Rpap1 protein_coding retained_intron MGP_BALBcJ_T0056902.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117829043 117831174 - Rpap1 protein_coding retained_intron MGP_BALBcJ_T0056903.1 MGP_BALBcJ_G0026326.1 mouse_genomes_project 2 117829386 117838180 - Rpap1 protein_coding processed_transcript MGP_BALBcJ_T0058086.1 MGP_BALBcJ_G0026577.1 mouse_genomes_project 2 145557681 145622940 + MGP_BALBcJ_P0058086 Xrn2 protein_coding protein_coding MGP_BALBcJ_T0058087.1 MGP_BALBcJ_G0026577.1 mouse_genomes_project 2 145574324 145583108 + Xrn2 protein_coding retained_intron MGP_BALBcJ_T0058088.1 MGP_BALBcJ_G0026577.1 mouse_genomes_project 2 145587381 145592594 + Xrn2 protein_coding retained_intron MGP_BALBcJ_T0058089.1 MGP_BALBcJ_G0026577.1 mouse_genomes_project 2 145606183 145613647 + Xrn2 protein_coding retained_intron MGP_BALBcJ_T0055156.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68047139 68061346 + MGP_BALBcJ_P0055156 Gad1 protein_coding protein_coding MGP_BALBcJ_T0055157.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68056156 68096470 + MGP_BALBcJ_P0055157 Gad1 protein_coding protein_coding MGP_BALBcJ_T0055158.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68056156 68081235 + MGP_BALBcJ_P0055158 Gad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055159.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68056277 68071227 + Gad1 protein_coding retained_intron MGP_BALBcJ_T0055160.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68056310 68078699 + MGP_BALBcJ_P0055160 Gad1 protein_coding protein_coding MGP_BALBcJ_T0055161.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68057009 68079220 + MGP_BALBcJ_P0055161 Gad1 protein_coding protein_coding MGP_BALBcJ_T0055162.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68057552 68080045 + MGP_BALBcJ_P0055162 Gad1 protein_coding protein_coding MGP_BALBcJ_T0055163.1 MGP_BALBcJ_G0025785.1 mouse_genomes_project 2 68060491 68096468 + Gad1 protein_coding processed_transcript MGP_BALBcJ_T0017719.1 MGP_BALBcJ_G0015347.1 mouse_genomes_project 2 26946088 26948420 - processed_transcript processed_transcript MGP_BALBcJ_T0052850.1 MGP_BALBcJ_G0025376.1 mouse_genomes_project 2 21239940 21247612 + MGP_BALBcJ_P0052850 Il1f9 protein_coding protein_coding MGP_BALBcJ_T0007404.1 MGP_BALBcJ_G0006069.1 mouse_genomes_project 2 172520110 172521265 + Gm14642 lincRNA lincRNA MGP_BALBcJ_T0011465.1 MGP_BALBcJ_G0009590.1 mouse_genomes_project 2 5466348 5466639 - Gm24534 misc_RNA misc_RNA MGP_BALBcJ_T0058415.1 MGP_BALBcJ_G0026682.1 mouse_genomes_project 2 152807762 152815788 + MGP_BALBcJ_P0058415 Bpifa3 protein_coding protein_coding MGP_BALBcJ_T0058416.1 MGP_BALBcJ_G0026682.1 mouse_genomes_project 2 152807762 152815788 + MGP_BALBcJ_P0058416 Bpifa3 protein_coding protein_coding MGP_BALBcJ_T0058417.1 MGP_BALBcJ_G0026682.1 mouse_genomes_project 2 152812972 152815051 + MGP_BALBcJ_P0058417 Bpifa3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057174.1 MGP_BALBcJ_G0026364.1 mouse_genomes_project 2 119439014 119460484 - MGP_BALBcJ_P0057174 Catsper2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057175.1 MGP_BALBcJ_G0026364.1 mouse_genomes_project 2 119440740 119460667 - MGP_BALBcJ_P0057175 Catsper2 protein_coding protein_coding MGP_BALBcJ_T0057176.1 MGP_BALBcJ_G0026364.1 mouse_genomes_project 2 119440742 119443961 - Catsper2 protein_coding retained_intron MGP_BALBcJ_T0057177.1 MGP_BALBcJ_G0026364.1 mouse_genomes_project 2 119440841 119459174 - MGP_BALBcJ_P0057177 Catsper2 protein_coding unknown_likely_coding MGP_BALBcJ_T0057178.1 MGP_BALBcJ_G0026364.1 mouse_genomes_project 2 119457117 119459176 - Catsper2 protein_coding retained_intron MGP_BALBcJ_T0056615.1 MGP_BALBcJ_G0026235.1 mouse_genomes_project 2 109446370 109447267 + MGP_BALBcJ_P0056615 Olfr1289 protein_coding protein_coding MGP_BALBcJ_T0055523.1 MGP_BALBcJ_G0025858.1 mouse_genomes_project 2 78087849 78172098 - MGP_BALBcJ_P0055523 Nckap1 protein_coding protein_coding MGP_BALBcJ_T0055524.1 MGP_BALBcJ_G0025858.1 mouse_genomes_project 2 78087855 78172214 - MGP_BALBcJ_P0055524 Nckap1 protein_coding protein_coding MGP_BALBcJ_T0055525.1 MGP_BALBcJ_G0025858.1 mouse_genomes_project 2 78095421 78114894 - Nckap1 protein_coding processed_transcript MGP_BALBcJ_T0055526.1 MGP_BALBcJ_G0025858.1 mouse_genomes_project 2 78135512 78145473 - Nckap1 protein_coding processed_transcript MGP_BALBcJ_T0055527.1 MGP_BALBcJ_G0025858.1 mouse_genomes_project 2 78139334 78145193 - Nckap1 protein_coding processed_transcript MGP_BALBcJ_T0055474.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76442233 76444183 + MGP_BALBcJ_P0055474 Ube2e3 protein_coding protein_coding MGP_BALBcJ_T0055475.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76442323 76487958 + MGP_BALBcJ_P0055475 Ube2e3 protein_coding protein_coding MGP_BALBcJ_T0055476.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76442871 76495804 + MGP_BALBcJ_P0055476 Ube2e3 protein_coding protein_coding MGP_BALBcJ_T0055477.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76443015 76488770 + Ube2e3 protein_coding retained_intron MGP_BALBcJ_T0055478.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76443109 76446335 + Ube2e3 protein_coding retained_intron MGP_BALBcJ_T0055479.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76443333 76494352 + MGP_BALBcJ_P0055479 Ube2e3 protein_coding protein_coding MGP_BALBcJ_T0055480.1 MGP_BALBcJ_G0025848.1 mouse_genomes_project 2 76492452 76494107 + Ube2e3 protein_coding retained_intron MGP_BALBcJ_T0013526.1 MGP_BALBcJ_G0011623.1 mouse_genomes_project 2 52735012 52736038 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054888.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58007417 58081414 - MGP_BALBcJ_P0054888 Itgb6 protein_coding protein_coding MGP_BALBcJ_T0054889.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58009285 58131166 - MGP_BALBcJ_P0054889 Itgb6 protein_coding protein_coding MGP_BALBcJ_T0054890.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58013299 58131166 - MGP_BALBcJ_P0054890 Itgb6 protein_coding protein_coding MGP_BALBcJ_T0054891.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58014193 58081429 - MGP_BALBcJ_P0054891 Itgb6 protein_coding protein_coding MGP_BALBcJ_T0054892.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58042950 58081396 - Itgb6 protein_coding processed_transcript MGP_BALBcJ_T0054893.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58061554 58081457 - Itgb6 protein_coding processed_transcript MGP_BALBcJ_T0054894.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58076950 58081406 - Itgb6 protein_coding processed_transcript MGP_BALBcJ_T0054895.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58082346 58114173 - Itgb6 protein_coding processed_transcript MGP_BALBcJ_T0054896.1 MGP_BALBcJ_G0025734.1 mouse_genomes_project 2 58102000 58114150 - Itgb6 protein_coding processed_transcript MGP_BALBcJ_T0058314.1 MGP_BALBcJ_G0026656.1 mouse_genomes_project 2 151541305 151542616 - MGP_BALBcJ_P0058314 Foxs1 protein_coding protein_coding MGP_BALBcJ_T0055805.1 MGP_BALBcJ_G0026008.1 mouse_genomes_project 2 85663257 85664230 - MGP_BALBcJ_P0055805 Olfr1156 protein_coding protein_coding MGP_BALBcJ_T0053277.1 MGP_BALBcJ_G0025456.1 mouse_genomes_project 2 23474003 23477983 - Dnlz protein_coding processed_transcript MGP_BALBcJ_T0053278.1 MGP_BALBcJ_G0025456.1 mouse_genomes_project 2 23474003 23477993 - MGP_BALBcJ_P0053278 Dnlz protein_coding protein_coding MGP_BALBcJ_T0003871.1 MGP_BALBcJ_G0003464.1 mouse_genomes_project 2 1401673 1409917 - Gm13175 antisense antisense MGP_BALBcJ_T0100970.1 MGP_BALBcJ_G0039006.1 mouse_genomes_project 2 106019613 106019744 - Gm23749 snoRNA snoRNA MGP_BALBcJ_T0013706.1 MGP_BALBcJ_G0011803.1 mouse_genomes_project 2 115257600 115258159 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099661.1 MGP_BALBcJ_G0037697.1 mouse_genomes_project 2 22088652 22088759 - Gm25518 snRNA snRNA MGP_BALBcJ_T0013792.1 MGP_BALBcJ_G0011889.1 mouse_genomes_project 2 149571545 149571902 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013700.1 MGP_BALBcJ_G0011797.1 mouse_genomes_project 2 110396826 110397127 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013440.1 MGP_BALBcJ_G0011537.1 mouse_genomes_project 2 20211836 20213503 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013659.1 MGP_BALBcJ_G0011756.1 mouse_genomes_project 2 98319669 98320456 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055654.1 MGP_BALBcJ_G0025890.1 mouse_genomes_project 2 82513916 82550978 - MGP_BALBcJ_P0055654 P2rx3 protein_coding protein_coding MGP_BALBcJ_T0055655.1 MGP_BALBcJ_G0025890.1 mouse_genomes_project 2 82513975 82552953 - MGP_BALBcJ_P0055655 P2rx3 protein_coding protein_coding MGP_BALBcJ_T0055656.1 MGP_BALBcJ_G0025890.1 mouse_genomes_project 2 82514176 82550813 - MGP_BALBcJ_P0055656 P2rx3 protein_coding protein_coding MGP_BALBcJ_T0055657.1 MGP_BALBcJ_G0025890.1 mouse_genomes_project 2 82540558 82548801 - P2rx3 protein_coding processed_transcript MGP_BALBcJ_T0055658.1 MGP_BALBcJ_G0025890.1 mouse_genomes_project 2 82547543 82548685 - P2rx3 protein_coding processed_transcript MGP_BALBcJ_T0058570.1 MGP_BALBcJ_G0026717.1 mouse_genomes_project 2 154509935 154514285 + MGP_BALBcJ_P0058570 Procr protein_coding protein_coding MGP_BALBcJ_T0058571.1 MGP_BALBcJ_G0026717.1 mouse_genomes_project 2 154509941 154513143 + MGP_BALBcJ_P0058571 Procr protein_coding protein_coding MGP_BALBcJ_T0058572.1 MGP_BALBcJ_G0026717.1 mouse_genomes_project 2 154509968 154512610 + Procr protein_coding retained_intron MGP_BALBcJ_T0058573.1 MGP_BALBcJ_G0026717.1 mouse_genomes_project 2 154510161 154514282 + Procr protein_coding processed_transcript MGP_BALBcJ_T0017764.1 MGP_BALBcJ_G0015380.1 mouse_genomes_project 2 88677596 88686749 - Ptpmt1 processed_transcript processed_transcript MGP_BALBcJ_T0017765.1 MGP_BALBcJ_G0015380.1 mouse_genomes_project 2 88679593 88687150 - Ptpmt1 processed_transcript processed_transcript MGP_BALBcJ_T0017766.1 MGP_BALBcJ_G0015380.1 mouse_genomes_project 2 88679593 88686942 - Ptpmt1 processed_transcript processed_transcript MGP_BALBcJ_T0017767.1 MGP_BALBcJ_G0015380.1 mouse_genomes_project 2 88679874 88686487 - Ptpmt1 processed_transcript processed_transcript MGP_BALBcJ_T0017768.1 MGP_BALBcJ_G0015380.1 mouse_genomes_project 2 88682918 88686560 - Ptpmt1 processed_transcript processed_transcript MGP_BALBcJ_T0099693.1 MGP_BALBcJ_G0037729.1 mouse_genomes_project 2 116099755 116099913 - Gm25308 snRNA snRNA MGP_BALBcJ_T0099712.1 MGP_BALBcJ_G0037748.1 mouse_genomes_project 2 163496437 163496544 + Gm25512 snRNA snRNA MGP_BALBcJ_T0013570.1 MGP_BALBcJ_G0011667.1 mouse_genomes_project 2 68908106 68908451 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057616.1 MGP_BALBcJ_G0026474.1 mouse_genomes_project 2 128675552 128680763 - MGP_BALBcJ_P0057616 Idh3b protein_coding protein_coding MGP_BALBcJ_T0057617.1 MGP_BALBcJ_G0026474.1 mouse_genomes_project 2 128675555 128676795 - MGP_BALBcJ_P0057617 Idh3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057618.1 MGP_BALBcJ_G0026474.1 mouse_genomes_project 2 128678382 128680650 - Idh3b protein_coding retained_intron MGP_BALBcJ_T0057619.1 MGP_BALBcJ_G0026474.1 mouse_genomes_project 2 128679878 128680631 - Idh3b protein_coding retained_intron MGP_BALBcJ_T0013507.1 MGP_BALBcJ_G0011604.1 mouse_genomes_project 2 47132423 47132901 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007364.1 MGP_BALBcJ_G0006036.1 mouse_genomes_project 2 164910780 164922587 - Gm11464 lincRNA lincRNA MGP_BALBcJ_T0055373.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73414075 73513137 + MGP_BALBcJ_P0055373 Agps protein_coding protein_coding MGP_BALBcJ_T0055374.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73414087 73476871 + MGP_BALBcJ_P0055374 Agps protein_coding protein_coding MGP_BALBcJ_T0055375.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73414403 73507866 + MGP_BALBcJ_P0055375 Agps protein_coding protein_coding MGP_BALBcJ_T0055376.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73450233 73459889 + MGP_BALBcJ_P0055376 Agps protein_coding protein_coding MGP_BALBcJ_T0055377.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73455804 73473407 + Agps protein_coding processed_transcript MGP_BALBcJ_T0055378.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73475724 73507936 + MGP_BALBcJ_P0055378 Agps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055379.1 MGP_BALBcJ_G0025830.1 mouse_genomes_project 2 73490831 73493330 + Agps protein_coding retained_intron MGP_BALBcJ_T0055856.1 MGP_BALBcJ_G0026055.1 mouse_genomes_project 2 86920581 86921517 - MGP_BALBcJ_P0055856 Olfr1221 protein_coding protein_coding MGP_BALBcJ_T0004036.1 MGP_BALBcJ_G0003583.1 mouse_genomes_project 2 107964928 107983974 - Ccdc34os antisense antisense MGP_BALBcJ_T0004037.1 MGP_BALBcJ_G0003583.1 mouse_genomes_project 2 107964929 107983977 - Ccdc34os antisense antisense MGP_BALBcJ_T0052451.1 MGP_BALBcJ_G0025309.1 mouse_genomes_project 2 6930761 7068947 - MGP_BALBcJ_P0052451 Taf3 protein_coding protein_coding MGP_BALBcJ_T0052452.1 MGP_BALBcJ_G0025309.1 mouse_genomes_project 2 6931503 6959244 - Taf3 protein_coding processed_transcript MGP_BALBcJ_T0052453.1 MGP_BALBcJ_G0025309.1 mouse_genomes_project 2 6932288 6935047 - MGP_BALBcJ_P0052453 Taf3 protein_coding protein_coding MGP_BALBcJ_T0052454.1 MGP_BALBcJ_G0025309.1 mouse_genomes_project 2 6932290 6934621 - MGP_BALBcJ_P0052454 Taf3 protein_coding protein_coding MGP_BALBcJ_T0055344.1 MGP_BALBcJ_G0025816.1 mouse_genomes_project 2 72221248 72227814 - MGP_BALBcJ_P0055344 Evx2 protein_coding protein_coding MGP_BALBcJ_T0055345.1 MGP_BALBcJ_G0025816.1 mouse_genomes_project 2 72223874 72227676 - MGP_BALBcJ_P0055345 Evx2 protein_coding protein_coding MGP_BALBcJ_T0013396.1 MGP_BALBcJ_G0011493.1 mouse_genomes_project 2 5625805 5626352 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013769.1 MGP_BALBcJ_G0011866.1 mouse_genomes_project 2 142877979 142878382 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101003.1 MGP_BALBcJ_G0039039.1 mouse_genomes_project 2 157199451 157199584 + Gm25129 snoRNA snoRNA MGP_BALBcJ_T0013512.1 MGP_BALBcJ_G0011609.1 mouse_genomes_project 2 48346542 48348708 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058855.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156847770 156898570 + MGP_BALBcJ_P0058855 Rprd1b protein_coding protein_coding MGP_BALBcJ_T0058856.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156847781 156867984 + Rprd1b protein_coding retained_intron MGP_BALBcJ_T0058857.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156847965 156898570 + Rprd1b protein_coding processed_transcript MGP_BALBcJ_T0058858.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156847974 156898570 + MGP_BALBcJ_P0058858 Rprd1b protein_coding protein_coding MGP_BALBcJ_T0058859.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156847994 156898570 + MGP_BALBcJ_P0058859 Rprd1b protein_coding protein_coding MGP_BALBcJ_T0058860.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156848072 156953160 + MGP_BALBcJ_P0058860 Rprd1b protein_coding protein_coding MGP_BALBcJ_T0058861.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156848168 156897685 + MGP_BALBcJ_P0058861 Rprd1b protein_coding unknown_likely_coding MGP_BALBcJ_T0058862.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156862696 156893680 + MGP_BALBcJ_P0058862 Rprd1b protein_coding protein_coding MGP_BALBcJ_T0058863.1 MGP_BALBcJ_G0026763.1 mouse_genomes_project 2 156867232 156889122 + MGP_BALBcJ_P0058863 Rprd1b protein_coding protein_coding MGP_BALBcJ_T0053368.1 MGP_BALBcJ_G0025468.1 mouse_genomes_project 2 23805209 23808818 - MGP_BALBcJ_P0053368 Lcn4 protein_coding protein_coding MGP_BALBcJ_T0017830.1 MGP_BALBcJ_G0015406.1 mouse_genomes_project 2 127283156 127287951 + Gm14027 processed_transcript processed_transcript MGP_BALBcJ_T0053826.1 MGP_BALBcJ_G0025544.1 mouse_genomes_project 2 27687708 27690395 - MGP_BALBcJ_P0053826 Ier5l protein_coding protein_coding MGP_BALBcJ_T0055606.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82187119 82194793 - MGP_BALBcJ_P0055606 Tmx2 protein_coding unknown_likely_coding MGP_BALBcJ_T0055607.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82187125 82195582 - MGP_BALBcJ_P0055607 Tmx2 protein_coding protein_coding MGP_BALBcJ_T0055608.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82187125 82194872 - MGP_BALBcJ_P0055608 Tmx2 protein_coding protein_coding MGP_BALBcJ_T0055609.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82187126 82194810 - MGP_BALBcJ_P0055609 Tmx2 protein_coding protein_coding MGP_BALBcJ_T0055610.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82188072 82194803 - Tmx2 protein_coding processed_transcript MGP_BALBcJ_T0055611.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82188150 82194797 - Tmx2 protein_coding processed_transcript MGP_BALBcJ_T0055612.1 MGP_BALBcJ_G0025875.1 mouse_genomes_project 2 82192869 82195894 - MGP_BALBcJ_P0055612 Tmx2 protein_coding protein_coding MGP_BALBcJ_T0013863.1 MGP_BALBcJ_G0011960.1 mouse_genomes_project 2 179291335 179291744 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007223.1 MGP_BALBcJ_G0005921.1 mouse_genomes_project 2 74911120 74913369 + Gm13943 lincRNA lincRNA MGP_BALBcJ_T0013388.1 MGP_BALBcJ_G0011485.1 mouse_genomes_project 2 1655025 1655402 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013699.1 MGP_BALBcJ_G0011796.1 mouse_genomes_project 2 110104010 110123282 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003979.1 MGP_BALBcJ_G0003548.1 mouse_genomes_project 2 65941809 65943480 + Gm13596 antisense antisense MGP_BALBcJ_T0013756.1 MGP_BALBcJ_G0011853.1 mouse_genomes_project 2 138568091 138568529 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057922.1 MGP_BALBcJ_G0026540.1 mouse_genomes_project 2 137978653 138124857 + MGP_BALBcJ_P0057922 Sptlc3 protein_coding protein_coding MGP_BALBcJ_T0057923.1 MGP_BALBcJ_G0026540.1 mouse_genomes_project 2 137978660 138125475 + MGP_BALBcJ_P0057923 Sptlc3 protein_coding protein_coding MGP_BALBcJ_T0056256.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91668488 91684927 - MGP_BALBcJ_P0056256 Accs protein_coding protein_coding MGP_BALBcJ_T0056257.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91670464 91684665 - MGP_BALBcJ_P0056257 Accs protein_coding protein_coding MGP_BALBcJ_T0056258.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91670464 91684785 - MGP_BALBcJ_P0056258 Accs protein_coding protein_coding MGP_BALBcJ_T0056259.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91671014 91674383 - Accs protein_coding retained_intron MGP_BALBcJ_T0056260.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91672046 91684929 - Accs protein_coding retained_intron MGP_BALBcJ_T0056261.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91673038 91682917 - MGP_BALBcJ_P0056261 Accs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056262.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91674216 91677292 - Accs protein_coding retained_intron MGP_BALBcJ_T0056263.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91676303 91677405 - Accs protein_coding retained_intron MGP_BALBcJ_T0056264.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91677592 91684802 - MGP_BALBcJ_P0056264 Accs protein_coding protein_coding MGP_BALBcJ_T0056265.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91677821 91684925 - Accs protein_coding retained_intron MGP_BALBcJ_T0056266.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91677832 91684925 - Accs protein_coding retained_intron MGP_BALBcJ_T0056267.1 MGP_BALBcJ_G0026149.1 mouse_genomes_project 2 91680044 91680772 - Accs protein_coding processed_transcript MGP_BALBcJ_T0010353.1 MGP_BALBcJ_G0008478.1 mouse_genomes_project 2 7521984 7522082 + Mir297a-4 miRNA miRNA MGP_BALBcJ_T0013730.1 MGP_BALBcJ_G0011827.1 mouse_genomes_project 2 127629056 127629157 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056776.1 MGP_BALBcJ_G0026294.1 mouse_genomes_project 2 116737103 116760539 - MGP_BALBcJ_P0056776 Plcb2 protein_coding protein_coding MGP_BALBcJ_T0056777.1 MGP_BALBcJ_G0026294.1 mouse_genomes_project 2 116737582 116760460 - MGP_BALBcJ_P0056777 Plcb2 protein_coding protein_coding MGP_BALBcJ_T0056778.1 MGP_BALBcJ_G0026294.1 mouse_genomes_project 2 116737766 116740957 - Plcb2 protein_coding retained_intron MGP_BALBcJ_T0056779.1 MGP_BALBcJ_G0026294.1 mouse_genomes_project 2 116738285 116739328 - Plcb2 protein_coding retained_intron MGP_BALBcJ_T0056780.1 MGP_BALBcJ_G0026294.1 mouse_genomes_project 2 116740403 116743696 - Plcb2 protein_coding retained_intron MGP_BALBcJ_T0056781.1 MGP_BALBcJ_G0026294.1 mouse_genomes_project 2 116743824 116760492 - Plcb2 protein_coding retained_intron MGP_BALBcJ_T0059691.1 MGP_BALBcJ_G0026973.1 mouse_genomes_project 2 179903725 179928939 + MGP_BALBcJ_P0059691 Col9a3 protein_coding protein_coding MGP_BALBcJ_T0059692.1 MGP_BALBcJ_G0026973.1 mouse_genomes_project 2 179904157 179928935 + MGP_BALBcJ_P0059692 Col9a3 protein_coding protein_coding MGP_BALBcJ_T0059693.1 MGP_BALBcJ_G0026973.1 mouse_genomes_project 2 179904741 179911597 + Col9a3 protein_coding retained_intron MGP_BALBcJ_T0059694.1 MGP_BALBcJ_G0026973.1 mouse_genomes_project 2 179909004 179919237 + Col9a3 protein_coding retained_intron MGP_BALBcJ_T0059695.1 MGP_BALBcJ_G0026973.1 mouse_genomes_project 2 179919920 179928048 + Col9a3 protein_coding retained_intron MGP_BALBcJ_T0059696.1 MGP_BALBcJ_G0026973.1 mouse_genomes_project 2 179922073 179928352 + Col9a3 protein_coding retained_intron MGP_BALBcJ_T0007406.1 MGP_BALBcJ_G0006071.1 mouse_genomes_project 2 173999796 174010000 + Gm14616 lincRNA lincRNA MGP_BALBcJ_T0059189.1 MGP_BALBcJ_G0026858.1 mouse_genomes_project 2 163797437 163817583 - MGP_BALBcJ_P0059189 Zfp335 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059190.1 MGP_BALBcJ_G0026858.1 mouse_genomes_project 2 163797437 163817583 - MGP_BALBcJ_P0059190 Zfp335 protein_coding protein_coding MGP_BALBcJ_T0059191.1 MGP_BALBcJ_G0026858.1 mouse_genomes_project 2 163808190 163813491 - MGP_BALBcJ_P0059191 Zfp335 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057338.1 MGP_BALBcJ_G0026406.1 mouse_genomes_project 2 123869663 123914747 - MGP_BALBcJ_P0057338 Shc4 protein_coding protein_coding MGP_BALBcJ_T0057339.1 MGP_BALBcJ_G0026406.1 mouse_genomes_project 2 123869663 123964780 - MGP_BALBcJ_P0057339 Shc4 protein_coding protein_coding MGP_BALBcJ_T0057340.1 MGP_BALBcJ_G0026406.1 mouse_genomes_project 2 123871273 123914617 - MGP_BALBcJ_P0057340 Shc4 protein_coding protein_coding MGP_BALBcJ_T0057342.1 MGP_BALBcJ_G0026406.1 mouse_genomes_project 2 123933330 123965541 - Shc4 protein_coding retained_intron MGP_BALBcJ_T0059077.1 MGP_BALBcJ_G0026823.1 mouse_genomes_project 2 163240471 163242909 - MGP_BALBcJ_P0059077 Slpi protein_coding protein_coding MGP_BALBcJ_T0059078.1 MGP_BALBcJ_G0026823.1 mouse_genomes_project 2 163240563 163242469 - MGP_BALBcJ_P0059078 Slpi protein_coding protein_coding MGP_BALBcJ_T0059079.1 MGP_BALBcJ_G0026823.1 mouse_genomes_project 2 163241996 163278220 - MGP_BALBcJ_P0059079 Slpi protein_coding protein_coding MGP_BALBcJ_T0052402.1 MGP_BALBcJ_G0025302.1 mouse_genomes_project 2 3073262 3109056 - MGP_BALBcJ_P0052402 Proser2 protein_coding protein_coding MGP_BALBcJ_T0052403.1 MGP_BALBcJ_G0025302.1 mouse_genomes_project 2 3075681 3108991 - MGP_BALBcJ_P0052403 Proser2 protein_coding protein_coding MGP_BALBcJ_T0052404.1 MGP_BALBcJ_G0025302.1 mouse_genomes_project 2 3080180 3108984 - MGP_BALBcJ_P0052404 Proser2 protein_coding protein_coding MGP_BALBcJ_T0052405.1 MGP_BALBcJ_G0025302.1 mouse_genomes_project 2 3103651 3109026 - Proser2 protein_coding processed_transcript MGP_BALBcJ_T0013410.1 MGP_BALBcJ_G0011507.1 mouse_genomes_project 2 11804073 11805064 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056358.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100714951 100808988 - MGP_BALBcJ_P0056358 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056359.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100714951 100809028 - MGP_BALBcJ_P0056359 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056360.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100716348 100808858 - MGP_BALBcJ_P0056360 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056361.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100716369 100808873 - MGP_BALBcJ_P0056361 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056362.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100717936 100808732 - MGP_BALBcJ_P0056362 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056363.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100717936 100808713 - MGP_BALBcJ_P0056363 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056364.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100717946 100808713 - MGP_BALBcJ_P0056364 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056365.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100717949 100808709 - MGP_BALBcJ_P0056365 Cd44 protein_coding protein_coding MGP_BALBcJ_T0056366.1 MGP_BALBcJ_G0026169.1 mouse_genomes_project 2 100758910 100808821 - Cd44 protein_coding retained_intron MGP_BALBcJ_T0055365.1 MGP_BALBcJ_G0025826.1 mouse_genomes_project 2 72331642 72333804 + MGP_BALBcJ_P0055365 Hoxd1 protein_coding protein_coding MGP_BALBcJ_T0059105.1 MGP_BALBcJ_G0026831.1 mouse_genomes_project 2 163388894 163399898 + MGP_BALBcJ_P0059105 Pigt protein_coding protein_coding MGP_BALBcJ_T0059106.1 MGP_BALBcJ_G0026831.1 mouse_genomes_project 2 163388909 163394909 + MGP_BALBcJ_P0059106 Pigt protein_coding protein_coding MGP_BALBcJ_T0059107.1 MGP_BALBcJ_G0026831.1 mouse_genomes_project 2 163388920 163395185 + Pigt protein_coding retained_intron MGP_BALBcJ_T0059108.1 MGP_BALBcJ_G0026831.1 mouse_genomes_project 2 163388935 163399898 + MGP_BALBcJ_P0059108 Pigt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059109.1 MGP_BALBcJ_G0026831.1 mouse_genomes_project 2 163391289 163392979 + Pigt protein_coding retained_intron MGP_BALBcJ_T0058569.1 MGP_BALBcJ_G0026716.1 mouse_genomes_project 2 154494272 154494329 - MGP_BALBcJ_P0058569 Gm17581 protein_coding protein_coding MGP_BALBcJ_T0059446.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167752459 167772250 - MGP_BALBcJ_P0059446 Sall4 protein_coding protein_coding MGP_BALBcJ_T0059447.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167752459 167772250 - MGP_BALBcJ_P0059447 Sall4 protein_coding protein_coding MGP_BALBcJ_T0059448.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167752459 167772078 - MGP_BALBcJ_P0059448 Sall4 protein_coding protein_coding MGP_BALBcJ_T0059449.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167759044 167760073 - MGP_BALBcJ_P0059449 Sall4 protein_coding protein_coding MGP_BALBcJ_T0059450.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167760310 167770295 - MGP_BALBcJ_P0059450 Sall4 protein_coding protein_coding MGP_BALBcJ_T0059451.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167760743 167772992 - Sall4 protein_coding processed_transcript MGP_BALBcJ_T0059452.1 MGP_BALBcJ_G0026905.1 mouse_genomes_project 2 167760882 167772166 - Sall4 protein_coding processed_transcript MGP_BALBcJ_T0053484.1 MGP_BALBcJ_G0025490.1 mouse_genomes_project 2 25051202 25206766 + MGP_BALBcJ_P0053484 Col5a1 protein_coding protein_coding MGP_BALBcJ_T0053485.1 MGP_BALBcJ_G0025490.1 mouse_genomes_project 2 25184266 25203967 + MGP_BALBcJ_P0053485 Col5a1 protein_coding protein_coding MGP_BALBcJ_T0013449.1 MGP_BALBcJ_G0011546.1 mouse_genomes_project 2 23117118 23117755 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013382.1 MGP_BALBcJ_G0011479.1 mouse_genomes_project 2 15178 15694 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058851.1 MGP_BALBcJ_G0026762.1 mouse_genomes_project 2 156800829 156847707 - MGP_BALBcJ_P0058851 Tti1 protein_coding protein_coding MGP_BALBcJ_T0058852.1 MGP_BALBcJ_G0026762.1 mouse_genomes_project 2 156800838 156828659 - MGP_BALBcJ_P0058852 Tti1 protein_coding protein_coding MGP_BALBcJ_T0058853.1 MGP_BALBcJ_G0026762.1 mouse_genomes_project 2 156814305 156826509 - Tti1 protein_coding processed_transcript MGP_BALBcJ_T0058854.1 MGP_BALBcJ_G0026762.1 mouse_genomes_project 2 156828066 156830590 - MGP_BALBcJ_P0058854 Tti1 protein_coding protein_coding MGP_BALBcJ_T0007178.1 MGP_BALBcJ_G0005883.1 mouse_genomes_project 2 48645050 48645531 + Gm28639 lincRNA lincRNA MGP_BALBcJ_T0098865.1 MGP_BALBcJ_G0036913.1 mouse_genomes_project 2 1258149 1260557 + Gm36988 sense_intronic sense_intronic MGP_BALBcJ_T0053398.1 MGP_BALBcJ_G0025474.1 mouse_genomes_project 2 24061989 24065806 + MGP_BALBcJ_P0053398 Surf2 protein_coding protein_coding MGP_BALBcJ_T0053399.1 MGP_BALBcJ_G0025474.1 mouse_genomes_project 2 24062003 24065795 + Surf2 protein_coding processed_transcript MGP_BALBcJ_T0053400.1 MGP_BALBcJ_G0025474.1 mouse_genomes_project 2 24062291 24065444 + Surf2 protein_coding processed_transcript MGP_BALBcJ_T0053401.1 MGP_BALBcJ_G0025474.1 mouse_genomes_project 2 24062291 24065789 + Surf2 protein_coding retained_intron MGP_BALBcJ_T0053402.1 MGP_BALBcJ_G0025474.1 mouse_genomes_project 2 24062435 24065576 + Surf2 protein_coding processed_transcript MGP_BALBcJ_T0053403.1 MGP_BALBcJ_G0025474.1 mouse_genomes_project 2 24063050 24065458 + Surf2 protein_coding processed_transcript MGP_BALBcJ_T0007382.1 MGP_BALBcJ_G0006050.1 mouse_genomes_project 2 167285157 167291260 - Gm14262 lincRNA lincRNA MGP_BALBcJ_T0055659.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82552724 82562624 + MGP_BALBcJ_P0055659 Ssrp1 protein_coding protein_coding MGP_BALBcJ_T0055660.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82552941 82562621 + MGP_BALBcJ_P0055660 Ssrp1 protein_coding protein_coding MGP_BALBcJ_T0055661.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82552943 82554764 + Ssrp1 protein_coding processed_transcript MGP_BALBcJ_T0055662.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82552945 82561287 + MGP_BALBcJ_P0055662 Ssrp1 protein_coding protein_coding MGP_BALBcJ_T0055663.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82553023 82555948 + Ssrp1 protein_coding processed_transcript MGP_BALBcJ_T0055664.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82555604 82556515 + Ssrp1 protein_coding processed_transcript MGP_BALBcJ_T0055665.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82556666 82557813 + Ssrp1 protein_coding processed_transcript MGP_BALBcJ_T0055666.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82560765 82562233 + Ssrp1 protein_coding processed_transcript MGP_BALBcJ_T0055667.1 MGP_BALBcJ_G0025891.1 mouse_genomes_project 2 82560869 82561800 + Ssrp1 protein_coding processed_transcript MGP_BALBcJ_T0056682.1 MGP_BALBcJ_G0026272.1 mouse_genomes_project 2 111756753 111803451 - MGP_BALBcJ_P0056682 Scg5 protein_coding protein_coding MGP_BALBcJ_T0056683.1 MGP_BALBcJ_G0026272.1 mouse_genomes_project 2 111801668 111803092 - Scg5 protein_coding processed_transcript MGP_BALBcJ_T0017823.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126453571 126692615 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0017824.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126560011 126692797 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0017825.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126576991 126692823 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0017826.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126577167 126692645 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0017827.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126608652 126692715 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0017828.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126635448 126692661 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0017829.1 MGP_BALBcJ_G0015405.1 mouse_genomes_project 2 126635449 126692366 - Gm14005 processed_transcript processed_transcript MGP_BALBcJ_T0101005.1 MGP_BALBcJ_G0039041.1 mouse_genomes_project 2 159839831 159839956 + Gm25561 snoRNA snoRNA MGP_BALBcJ_T0007249.1 MGP_BALBcJ_G0005941.1 mouse_genomes_project 2 93220262 93223752 + Gm13794 lincRNA lincRNA MGP_BALBcJ_T0003930.1 MGP_BALBcJ_G0003509.1 mouse_genomes_project 2 28924333 28938157 - Gm13427 antisense antisense MGP_BALBcJ_T0102411.1 MGP_BALBcJ_G0040227.1 mouse_genomes_project 2 84132855 84134392 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001042.1 MGP_BALBcJ_G0000970.1 mouse_genomes_project 2 11748897 11750306 + TEC TEC MGP_BALBcJ_T0013776.1 MGP_BALBcJ_G0011873.1 mouse_genomes_project 2 145425198 145426035 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013567.1 MGP_BALBcJ_G0011664.1 mouse_genomes_project 2 67263097 67263559 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059576.1 MGP_BALBcJ_G0026942.1 mouse_genomes_project 2 173546789 173558492 + MGP_BALBcJ_P0059576 Nelfcd protein_coding protein_coding MGP_BALBcJ_T0059577.1 MGP_BALBcJ_G0026942.1 mouse_genomes_project 2 173546836 173558492 + MGP_BALBcJ_P0059577 Nelfcd protein_coding protein_coding MGP_BALBcJ_T0059578.1 MGP_BALBcJ_G0026942.1 mouse_genomes_project 2 173546865 173553662 + Nelfcd protein_coding processed_transcript MGP_BALBcJ_T0059579.1 MGP_BALBcJ_G0026942.1 mouse_genomes_project 2 173554381 173555903 + Nelfcd protein_coding retained_intron MGP_BALBcJ_T0059580.1 MGP_BALBcJ_G0026942.1 mouse_genomes_project 2 173555669 173556938 + Nelfcd protein_coding retained_intron MGP_BALBcJ_T0059581.1 MGP_BALBcJ_G0026942.1 mouse_genomes_project 2 173557351 173558387 + Nelfcd protein_coding retained_intron MGP_BALBcJ_T0053021.1 MGP_BALBcJ_G0025405.1 mouse_genomes_project 2 22344677 22345531 + MGP_BALBcJ_P0053021 Tmem203 protein_coding protein_coding MGP_BALBcJ_T0055818.1 MGP_BALBcJ_G0026020.1 mouse_genomes_project 2 86117553 86118501 + MGP_BALBcJ_P0055818 Olfr1176 protein_coding protein_coding MGP_BALBcJ_T0057541.1 MGP_BALBcJ_G0026453.1 mouse_genomes_project 2 127130021 127165459 + MGP_BALBcJ_P0057541 Fbln7 protein_coding protein_coding MGP_BALBcJ_T0057542.1 MGP_BALBcJ_G0026453.1 mouse_genomes_project 2 127130985 127165455 + MGP_BALBcJ_P0057542 Fbln7 protein_coding protein_coding MGP_BALBcJ_T0052970.1 MGP_BALBcJ_G0025393.1 mouse_genomes_project 2 22171131 22180648 - MGP_BALBcJ_P0052970 Noxa1 protein_coding protein_coding MGP_BALBcJ_T0052971.1 MGP_BALBcJ_G0025393.1 mouse_genomes_project 2 22171131 22180630 - MGP_BALBcJ_P0052971 Noxa1 protein_coding protein_coding MGP_BALBcJ_T0052674.1 MGP_BALBcJ_G0025344.1 mouse_genomes_project 2 15094903 15107452 - MGP_BALBcJ_P0052674 A930004D18Rik protein_coding protein_coding MGP_BALBcJ_T0052675.1 MGP_BALBcJ_G0025344.1 mouse_genomes_project 2 15097636 15098471 - A930004D18Rik protein_coding processed_transcript MGP_BALBcJ_T0052676.1 MGP_BALBcJ_G0025344.1 mouse_genomes_project 2 15097684 15098582 - A930004D18Rik protein_coding processed_transcript MGP_BALBcJ_T0010313.1 MGP_BALBcJ_G0008438.1 mouse_genomes_project 2 2582151 2582231 + Gm27506 miRNA miRNA MGP_BALBcJ_T0059665.1 MGP_BALBcJ_G0026965.1 mouse_genomes_project 2 179556742 179557811 + MGP_BALBcJ_P0059665 Rps21 protein_coding protein_coding MGP_BALBcJ_T0059666.1 MGP_BALBcJ_G0026965.1 mouse_genomes_project 2 179556744 179557808 + Rps21 protein_coding retained_intron MGP_BALBcJ_T0059667.1 MGP_BALBcJ_G0026965.1 mouse_genomes_project 2 179556783 179557360 + Rps21 protein_coding retained_intron MGP_BALBcJ_T0059668.1 MGP_BALBcJ_G0026965.1 mouse_genomes_project 2 179556783 179557509 + Rps21 protein_coding retained_intron MGP_BALBcJ_T0059591.1 MGP_BALBcJ_G0026947.1 mouse_genomes_project 2 173785372 173852885 + MGP_BALBcJ_P0059591 Zfp831 protein_coding protein_coding MGP_BALBcJ_T0058364.1 MGP_BALBcJ_G0026667.1 mouse_genomes_project 2 151907820 151949830 + MGP_BALBcJ_P0058364 Kif3b protein_coding protein_coding MGP_BALBcJ_T0055839.1 MGP_BALBcJ_G0026040.1 mouse_genomes_project 2 86655521 86656437 + MGP_BALBcJ_P0055839 Olfr1204 protein_coding protein_coding MGP_BALBcJ_T0010394.1 MGP_BALBcJ_G0008519.1 mouse_genomes_project 2 36153468 36153557 + Mir181b-2 miRNA miRNA MGP_BALBcJ_T0059613.1 MGP_BALBcJ_G0026955.1 mouse_genomes_project 2 178737327 179196743 + MGP_BALBcJ_P0059613 Cdh4 protein_coding protein_coding MGP_BALBcJ_T0059614.1 MGP_BALBcJ_G0026955.1 mouse_genomes_project 2 178737518 179145165 + MGP_BALBcJ_P0059614 Cdh4 protein_coding protein_coding MGP_BALBcJ_T0059615.1 MGP_BALBcJ_G0026955.1 mouse_genomes_project 2 178739085 179077145 + Cdh4 protein_coding processed_transcript MGP_BALBcJ_T0059616.1 MGP_BALBcJ_G0026955.1 mouse_genomes_project 2 179073737 179094933 + Cdh4 protein_coding processed_transcript MGP_BALBcJ_T0059617.1 MGP_BALBcJ_G0026955.1 mouse_genomes_project 2 179191249 179193511 + Cdh4 protein_coding retained_intron MGP_BALBcJ_T0059618.1 MGP_BALBcJ_G0026955.1 mouse_genomes_project 2 179191274 179192055 + MGP_BALBcJ_P0059618 Cdh4 protein_coding protein_coding MGP_BALBcJ_T0056618.1 MGP_BALBcJ_G0026238.1 mouse_genomes_project 2 109561133 109562072 - MGP_BALBcJ_P0056618 protein_coding protein_coding MGP_BALBcJ_T0055481.1 MGP_BALBcJ_G0025849.1 mouse_genomes_project 2 76833001 76835428 + Itga4 protein_coding processed_transcript MGP_BALBcJ_T0055482.1 MGP_BALBcJ_G0025849.1 mouse_genomes_project 2 76833075 76913242 + MGP_BALBcJ_P0055482 Itga4 protein_coding protein_coding MGP_BALBcJ_T0055483.1 MGP_BALBcJ_G0025849.1 mouse_genomes_project 2 76833147 76851555 + Itga4 protein_coding processed_transcript MGP_BALBcJ_T0055484.1 MGP_BALBcJ_G0025849.1 mouse_genomes_project 2 76833296 76872228 + Itga4 protein_coding processed_transcript MGP_BALBcJ_T0055485.1 MGP_BALBcJ_G0025849.1 mouse_genomes_project 2 76833522 76871932 + Itga4 protein_coding processed_transcript MGP_BALBcJ_T0056278.1 MGP_BALBcJ_G0026152.1 mouse_genomes_project 2 91791515 91829499 - MGP_BALBcJ_P0056278 Gm27027 protein_coding protein_coding MGP_BALBcJ_T0058319.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151572188 151618985 + MGP_BALBcJ_P0058319 Ttll9 protein_coding protein_coding MGP_BALBcJ_T0058320.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151572209 151614834 + MGP_BALBcJ_P0058320 Ttll9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058321.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151572209 151614878 + MGP_BALBcJ_P0058321 Ttll9 protein_coding protein_coding MGP_BALBcJ_T0058322.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151572209 151614827 + MGP_BALBcJ_P0058322 Ttll9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058323.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151572214 151618616 + MGP_BALBcJ_P0058323 Ttll9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058324.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151581584 151618985 + MGP_BALBcJ_P0058324 Ttll9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058325.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151582862 151593608 + MGP_BALBcJ_P0058325 Ttll9 protein_coding protein_coding MGP_BALBcJ_T0058326.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151598771 151609077 + Ttll9 protein_coding retained_intron MGP_BALBcJ_T0058327.1 MGP_BALBcJ_G0026658.1 mouse_genomes_project 2 151614436 151620202 + Ttll9 protein_coding retained_intron MGP_BALBcJ_T0013720.1 MGP_BALBcJ_G0011817.1 mouse_genomes_project 2 120314349 120314697 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058868.1 MGP_BALBcJ_G0026765.1 mouse_genomes_project 2 157004641 157051417 - MGP_BALBcJ_P0058868 D630003M21Rik protein_coding protein_coding MGP_BALBcJ_T0058869.1 MGP_BALBcJ_G0026765.1 mouse_genomes_project 2 157008258 157051417 - MGP_BALBcJ_P0058869 D630003M21Rik protein_coding protein_coding MGP_BALBcJ_T0058870.1 MGP_BALBcJ_G0026765.1 mouse_genomes_project 2 157017844 157051417 - MGP_BALBcJ_P0058870 D630003M21Rik protein_coding protein_coding MGP_BALBcJ_T0010441.1 MGP_BALBcJ_G0008566.1 mouse_genomes_project 2 129475376 129475449 - Mir6973b miRNA miRNA MGP_BALBcJ_T0017713.1 MGP_BALBcJ_G0015343.1 mouse_genomes_project 2 24695176 24698113 + Gm13421 processed_transcript processed_transcript MGP_BALBcJ_T0017714.1 MGP_BALBcJ_G0015343.1 mouse_genomes_project 2 24695179 24697936 + Gm13421 processed_transcript processed_transcript MGP_BALBcJ_T0052378.1 MGP_BALBcJ_G0025297.1 mouse_genomes_project 2 2816451 2843148 + MGP_BALBcJ_P0052378 Nudt5 protein_coding protein_coding MGP_BALBcJ_T0052379.1 MGP_BALBcJ_G0025297.1 mouse_genomes_project 2 2816466 2839991 + MGP_BALBcJ_P0052379 Nudt5 protein_coding protein_coding MGP_BALBcJ_T0052380.1 MGP_BALBcJ_G0025297.1 mouse_genomes_project 2 2816685 2828683 + Nudt5 protein_coding retained_intron MGP_BALBcJ_T0052381.1 MGP_BALBcJ_G0025297.1 mouse_genomes_project 2 2816685 2835711 + MGP_BALBcJ_P0052381 Nudt5 protein_coding protein_coding MGP_BALBcJ_T0052382.1 MGP_BALBcJ_G0025297.1 mouse_genomes_project 2 2816722 2833651 + MGP_BALBcJ_P0052382 Nudt5 protein_coding protein_coding MGP_BALBcJ_T0052383.1 MGP_BALBcJ_G0025297.1 mouse_genomes_project 2 2819561 2832498 + Nudt5 protein_coding processed_transcript MGP_BALBcJ_T0055383.1 MGP_BALBcJ_G0025834.1 mouse_genomes_project 2 73572946 73589882 - MGP_BALBcJ_P0055383 Pde11a protein_coding protein_coding MGP_BALBcJ_T0055384.1 MGP_BALBcJ_G0025834.1 mouse_genomes_project 2 73573717 73927628 - MGP_BALBcJ_P0055384 Pde11a protein_coding protein_coding MGP_BALBcJ_T0055385.1 MGP_BALBcJ_G0025834.1 mouse_genomes_project 2 73611845 73807621 - MGP_BALBcJ_P0055385 Pde11a protein_coding protein_coding MGP_BALBcJ_T0052673.1 MGP_BALBcJ_G0025343.1 mouse_genomes_project 2 15066198 15066740 - MGP_BALBcJ_P0052673 H2afb1 protein_coding protein_coding MGP_BALBcJ_T0059453.1 MGP_BALBcJ_G0026906.1 mouse_genomes_project 2 167906346 167969954 - MGP_BALBcJ_P0059453 Zfp64 protein_coding protein_coding MGP_BALBcJ_T0059454.1 MGP_BALBcJ_G0026906.1 mouse_genomes_project 2 167919790 167926019 - MGP_BALBcJ_P0059454 Zfp64 protein_coding protein_coding MGP_BALBcJ_T0059455.1 MGP_BALBcJ_G0026906.1 mouse_genomes_project 2 167938342 167969639 - MGP_BALBcJ_P0059455 Zfp64 protein_coding protein_coding MGP_BALBcJ_T0059456.1 MGP_BALBcJ_G0026906.1 mouse_genomes_project 2 167948704 167969656 - MGP_BALBcJ_P0059456 Zfp64 protein_coding protein_coding MGP_BALBcJ_T0059457.1 MGP_BALBcJ_G0026906.1 mouse_genomes_project 2 167964888 167969633 - Zfp64 protein_coding retained_intron MGP_BALBcJ_T0010342.1 MGP_BALBcJ_G0008467.1 mouse_genomes_project 2 7516105 7516214 + Mir297b miRNA miRNA MGP_BALBcJ_T0100991.1 MGP_BALBcJ_G0039027.1 mouse_genomes_project 2 149693603 149693732 + Gm22187 snoRNA snoRNA MGP_BALBcJ_T0056858.1 MGP_BALBcJ_G0026313.1 mouse_genomes_project 2 117310585 117312657 - MGP_BALBcJ_P0056858 Rhov protein_coding protein_coding MGP_BALBcJ_T0100994.1 MGP_BALBcJ_G0039030.1 mouse_genomes_project 2 149895897 149896033 + snoRNA snoRNA MGP_BALBcJ_T0055071.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66646383 66660186 - MGP_BALBcJ_P0055071 Spc25 protein_coding protein_coding MGP_BALBcJ_T0055072.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66646909 66659943 - MGP_BALBcJ_P0055072 Spc25 protein_coding protein_coding MGP_BALBcJ_T0055073.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66649635 66659159 - MGP_BALBcJ_P0055073 Spc25 protein_coding protein_coding MGP_BALBcJ_T0055074.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66649678 66660209 - MGP_BALBcJ_P0055074 Spc25 protein_coding protein_coding MGP_BALBcJ_T0055075.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66652825 66660152 - Spc25 protein_coding processed_transcript MGP_BALBcJ_T0055076.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66654101 66659244 - Spc25 protein_coding processed_transcript MGP_BALBcJ_T0055077.1 MGP_BALBcJ_G0025767.1 mouse_genomes_project 2 66659666 66660208 - Spc25 protein_coding processed_transcript MGP_BALBcJ_T0059110.1 MGP_BALBcJ_G0026832.1 mouse_genomes_project 2 163455156 163456293 + Wfdc2 protein_coding processed_transcript MGP_BALBcJ_T0059111.1 MGP_BALBcJ_G0026832.1 mouse_genomes_project 2 163455322 163461251 + MGP_BALBcJ_P0059111 Wfdc2 protein_coding protein_coding MGP_BALBcJ_T0059112.1 MGP_BALBcJ_G0026832.1 mouse_genomes_project 2 163455442 163461251 + MGP_BALBcJ_P0059112 Wfdc2 protein_coding protein_coding MGP_BALBcJ_T0059113.1 MGP_BALBcJ_G0026832.1 mouse_genomes_project 2 163455457 163461251 + MGP_BALBcJ_P0059113 Wfdc2 protein_coding protein_coding MGP_BALBcJ_T0059114.1 MGP_BALBcJ_G0026832.1 mouse_genomes_project 2 163455762 163456926 + MGP_BALBcJ_P0059114 Wfdc2 protein_coding protein_coding MGP_BALBcJ_T0003981.1 MGP_BALBcJ_G0003550.1 mouse_genomes_project 2 67350333 67352658 + Mettl5os antisense antisense MGP_BALBcJ_T0102386.1 MGP_BALBcJ_G0040202.1 mouse_genomes_project 2 33598630 33599536 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013482.1 MGP_BALBcJ_G0011579.1 mouse_genomes_project 2 36479913 36480639 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013559.1 MGP_BALBcJ_G0011656.1 mouse_genomes_project 2 64319910 64321424 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007180.1 MGP_BALBcJ_G0005885.1 mouse_genomes_project 2 48790458 48792372 - Gm13499 lincRNA lincRNA MGP_BALBcJ_T0098583.1 MGP_BALBcJ_G0036637.1 mouse_genomes_project 2 165602083 165602199 - Gm23152 rRNA rRNA MGP_BALBcJ_T0054952.1 MGP_BALBcJ_G0025743.1 mouse_genomes_project 2 60018651 60070163 - MGP_BALBcJ_P0054952 Ifih1 protein_coding protein_coding MGP_BALBcJ_T0054953.1 MGP_BALBcJ_G0025743.1 mouse_genomes_project 2 60020300 60070105 - MGP_BALBcJ_P0054953 Ifih1 protein_coding protein_coding MGP_BALBcJ_T0054954.1 MGP_BALBcJ_G0025743.1 mouse_genomes_project 2 60031035 60070207 - Ifih1 protein_coding retained_intron MGP_BALBcJ_T0054955.1 MGP_BALBcJ_G0025743.1 mouse_genomes_project 2 60052224 60063425 - Ifih1 protein_coding processed_transcript MGP_BALBcJ_T0054956.1 MGP_BALBcJ_G0025743.1 mouse_genomes_project 2 60056259 60070110 - Ifih1 protein_coding retained_intron MGP_BALBcJ_T0054700.1 MGP_BALBcJ_G0025698.1 mouse_genomes_project 2 48555014 48574151 - MGP_BALBcJ_P0054700 Rnd3 protein_coding protein_coding MGP_BALBcJ_T0054701.1 MGP_BALBcJ_G0025698.1 mouse_genomes_project 2 48556411 48574150 - MGP_BALBcJ_P0054701 Rnd3 protein_coding protein_coding MGP_BALBcJ_T0054702.1 MGP_BALBcJ_G0025698.1 mouse_genomes_project 2 48561645 48574134 - Rnd3 protein_coding retained_intron MGP_BALBcJ_T0013692.1 MGP_BALBcJ_G0011789.1 mouse_genomes_project 2 109446328 109462838 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052441.1 MGP_BALBcJ_G0025306.1 mouse_genomes_project 2 6871831 6894025 - MGP_BALBcJ_P0052441 Gata3 protein_coding protein_coding MGP_BALBcJ_T0052442.1 MGP_BALBcJ_G0025306.1 mouse_genomes_project 2 6878170 6889102 - Gata3 protein_coding processed_transcript MGP_BALBcJ_T0052443.1 MGP_BALBcJ_G0025306.1 mouse_genomes_project 2 6889916 6890829 - Gata3 protein_coding processed_transcript MGP_BALBcJ_T0052444.1 MGP_BALBcJ_G0025306.1 mouse_genomes_project 2 6890131 6905455 - MGP_BALBcJ_P0052444 Gata3 protein_coding protein_coding MGP_BALBcJ_T0052445.1 MGP_BALBcJ_G0025306.1 mouse_genomes_project 2 6893264 6903205 - Gata3 protein_coding processed_transcript MGP_BALBcJ_T0052446.1 MGP_BALBcJ_G0025306.1 mouse_genomes_project 2 6893319 6905423 - Gata3 protein_coding processed_transcript MGP_BALBcJ_T0056484.1 MGP_BALBcJ_G0026195.1 mouse_genomes_project 2 102946900 102954548 - Eif3m protein_coding retained_intron MGP_BALBcJ_T0056485.1 MGP_BALBcJ_G0026195.1 mouse_genomes_project 2 102946900 102964898 - MGP_BALBcJ_P0056485 Eif3m protein_coding protein_coding MGP_BALBcJ_T0056486.1 MGP_BALBcJ_G0026195.1 mouse_genomes_project 2 102946903 102954102 - MGP_BALBcJ_P0056486 Eif3m protein_coding protein_coding MGP_BALBcJ_T0056487.1 MGP_BALBcJ_G0026195.1 mouse_genomes_project 2 102946933 102964861 - MGP_BALBcJ_P0056487 Eif3m protein_coding protein_coding MGP_BALBcJ_T0003997.1 MGP_BALBcJ_G0003559.1 mouse_genomes_project 2 70993399 71000633 + Gm13707 antisense antisense MGP_BALBcJ_T0004129.1 MGP_BALBcJ_G0003655.1 mouse_genomes_project 2 159677499 159728024 - Gm16751 antisense antisense MGP_BALBcJ_T0055369.1 MGP_BALBcJ_G0025828.1 mouse_genomes_project 2 73235237 73245516 + MGP_BALBcJ_P0055369 Hnrnpa3 protein_coding protein_coding MGP_BALBcJ_T0055370.1 MGP_BALBcJ_G0025828.1 mouse_genomes_project 2 73238675 73241559 + MGP_BALBcJ_P0055370 Hnrnpa3 protein_coding protein_coding MGP_BALBcJ_T0058426.1 MGP_BALBcJ_G0026687.1 mouse_genomes_project 2 152932843 152941112 + Bpifb9a protein_coding retained_intron MGP_BALBcJ_T0058427.1 MGP_BALBcJ_G0026687.1 mouse_genomes_project 2 152932843 152945514 + MGP_BALBcJ_P0058427 Bpifb9a protein_coding protein_coding MGP_BALBcJ_T0058428.1 MGP_BALBcJ_G0026687.1 mouse_genomes_project 2 152940663 152945514 + Bpifb9a protein_coding processed_transcript MGP_BALBcJ_T0053371.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24031721 24035781 - Surf6 protein_coding processed_transcript MGP_BALBcJ_T0053372.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24032018 24035343 - Surf6 protein_coding processed_transcript MGP_BALBcJ_T0053373.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24032082 24042783 - Surf6 protein_coding processed_transcript MGP_BALBcJ_T0053374.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24033482 24046269 - MGP_BALBcJ_P0053374 Surf6 protein_coding protein_coding MGP_BALBcJ_T0053375.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24033819 24046257 - MGP_BALBcJ_P0053375 Surf6 protein_coding protein_coding MGP_BALBcJ_T0053376.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24035844 24046148 - Surf6 protein_coding processed_transcript MGP_BALBcJ_T0053377.1 MGP_BALBcJ_G0025470.1 mouse_genomes_project 2 24042451 24043126 - Surf6 protein_coding processed_transcript MGP_BALBcJ_T0003982.1 MGP_BALBcJ_G0003551.1 mouse_genomes_project 2 67982761 68057468 - Gad1os antisense antisense MGP_BALBcJ_T0003983.1 MGP_BALBcJ_G0003551.1 mouse_genomes_project 2 67983068 67984292 - Gad1os antisense antisense MGP_BALBcJ_T0013742.1 MGP_BALBcJ_G0011839.1 mouse_genomes_project 2 130349881 130350755 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003905.1 MGP_BALBcJ_G0003491.1 mouse_genomes_project 2 22816223 22820042 - A230005M16Rik antisense antisense MGP_BALBcJ_T0003906.1 MGP_BALBcJ_G0003491.1 mouse_genomes_project 2 22816880 22818639 - A230005M16Rik antisense antisense MGP_BALBcJ_T0057968.1 MGP_BALBcJ_G0026551.1 mouse_genomes_project 2 141598260 141601501 + MGP_BALBcJ_P0057968 Otor protein_coding protein_coding MGP_BALBcJ_T0052739.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 16999525 17837114 + MGP_BALBcJ_P0052739 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052740.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17384521 17754790 + MGP_BALBcJ_P0052740 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052741.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17384521 17901161 + MGP_BALBcJ_P0052741 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052742.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17433525 17754656 + MGP_BALBcJ_P0052742 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052743.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17601598 17901150 + MGP_BALBcJ_P0052743 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052744.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17601598 17901150 + MGP_BALBcJ_P0052744 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052745.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17609089 17900511 + MGP_BALBcJ_P0052745 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052746.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17609109 17802858 + Etl4 protein_coding retained_intron MGP_BALBcJ_T0052747.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17609126 17901162 + MGP_BALBcJ_P0052747 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052748.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17637678 17800531 + Etl4 protein_coding processed_transcript MGP_BALBcJ_T0052749.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17637720 17755054 + Etl4 protein_coding processed_transcript MGP_BALBcJ_T0052750.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17651833 17800621 + Etl4 protein_coding processed_transcript MGP_BALBcJ_T0052751.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17804290 17836284 + Etl4 protein_coding processed_transcript MGP_BALBcJ_T0052752.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17813494 17894056 + Etl4 protein_coding retained_intron MGP_BALBcJ_T0052753.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17813494 17877854 + Etl4 protein_coding retained_intron MGP_BALBcJ_T0052754.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17813741 17898816 + MGP_BALBcJ_P0052754 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052755.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17829637 17900980 + MGP_BALBcJ_P0052755 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052756.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17829637 17901339 + MGP_BALBcJ_P0052756 Etl4 protein_coding protein_coding MGP_BALBcJ_T0052757.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17888866 17899507 + Etl4 protein_coding processed_transcript MGP_BALBcJ_T0052758.1 MGP_BALBcJ_G0025358.1 mouse_genomes_project 2 17898079 17901150 + Etl4 protein_coding retained_intron MGP_BALBcJ_T0057204.1 MGP_BALBcJ_G0026371.1 mouse_genomes_project 2 119524757 119623891 + MGP_BALBcJ_P0057204 Wdr76 protein_coding protein_coding MGP_BALBcJ_T0057205.1 MGP_BALBcJ_G0026371.1 mouse_genomes_project 2 119524817 119625351 + MGP_BALBcJ_P0057205 Wdr76 protein_coding protein_coding MGP_BALBcJ_T0057206.1 MGP_BALBcJ_G0026371.1 mouse_genomes_project 2 119580027 119623496 + MGP_BALBcJ_P0057206 Wdr76 protein_coding protein_coding MGP_BALBcJ_T0052976.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22287275 22299075 - MGP_BALBcJ_P0052976 Nelfb protein_coding protein_coding MGP_BALBcJ_T0052977.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22287276 22299075 - MGP_BALBcJ_P0052977 Nelfb protein_coding protein_coding MGP_BALBcJ_T0052978.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22287279 22298967 - Nelfb protein_coding retained_intron MGP_BALBcJ_T0052979.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22287601 22291357 - Nelfb protein_coding retained_intron MGP_BALBcJ_T0052980.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22288248 22291485 - MGP_BALBcJ_P0052980 Nelfb protein_coding protein_coding MGP_BALBcJ_T0052981.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22288717 22291165 - Nelfb protein_coding retained_intron MGP_BALBcJ_T0052982.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22291454 22298312 - MGP_BALBcJ_P0052982 Nelfb protein_coding protein_coding MGP_BALBcJ_T0052983.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22291514 22297660 - Nelfb protein_coding processed_transcript MGP_BALBcJ_T0052984.1 MGP_BALBcJ_G0025396.1 mouse_genomes_project 2 22292730 22298286 - Nelfb protein_coding retained_intron MGP_BALBcJ_T0054460.1 MGP_BALBcJ_G0025656.1 mouse_genomes_project 2 34234238 34235186 + MGP_BALBcJ_P0054460 Olfr356 protein_coding protein_coding MGP_BALBcJ_T0054456.1 MGP_BALBcJ_G0025652.1 mouse_genomes_project 2 34164306 34165254 + MGP_BALBcJ_P0054456 Olfr352 protein_coding protein_coding MGP_BALBcJ_T0013763.1 MGP_BALBcJ_G0011860.1 mouse_genomes_project 2 141669489 141670290 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013722.1 MGP_BALBcJ_G0011819.1 mouse_genomes_project 2 125107757 125108583 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056841.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117248007 117249930 + Zfyve19 protein_coding processed_transcript MGP_BALBcJ_T0056842.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117248402 117249993 + Zfyve19 protein_coding processed_transcript MGP_BALBcJ_T0056843.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117248422 117251156 + Zfyve19 protein_coding processed_transcript MGP_BALBcJ_T0056844.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117248431 117250534 + Zfyve19 protein_coding retained_intron MGP_BALBcJ_T0056845.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117248520 117256912 + MGP_BALBcJ_P0056845 Zfyve19 protein_coding protein_coding MGP_BALBcJ_T0056846.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117250228 117254747 + Zfyve19 protein_coding retained_intron MGP_BALBcJ_T0056847.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117250852 117251110 + Zfyve19 protein_coding processed_transcript MGP_BALBcJ_T0056848.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117251031 117254769 + Zfyve19 protein_coding retained_intron MGP_BALBcJ_T0056849.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117254313 117256255 + Zfyve19 protein_coding retained_intron MGP_BALBcJ_T0056850.1 MGP_BALBcJ_G0026310.1 mouse_genomes_project 2 117256122 117256907 + Zfyve19 protein_coding retained_intron MGP_BALBcJ_T0053443.1 MGP_BALBcJ_G0025483.1 mouse_genomes_project 2 24253988 24285491 - MGP_BALBcJ_P0053443 Fam163b protein_coding protein_coding MGP_BALBcJ_T0057250.1 MGP_BALBcJ_G0026384.1 mouse_genomes_project 2 120383080 120404025 - MGP_BALBcJ_P0057250 Duox2 protein_coding protein_coding MGP_BALBcJ_T0057251.1 MGP_BALBcJ_G0026384.1 mouse_genomes_project 2 120386535 120389417 - Duox2 protein_coding processed_transcript MGP_BALBcJ_T0052337.1 MGP_BALBcJ_G0025289.1 mouse_genomes_project 2 1838316 1871804 + MGP_BALBcJ_P0052337 Sephs1 protein_coding protein_coding MGP_BALBcJ_T0052338.1 MGP_BALBcJ_G0025289.1 mouse_genomes_project 2 1838995 1869384 + MGP_BALBcJ_P0052338 Sephs1 protein_coding protein_coding MGP_BALBcJ_T0052339.1 MGP_BALBcJ_G0025289.1 mouse_genomes_project 2 1840809 1849648 + Sephs1 protein_coding processed_transcript MGP_BALBcJ_T0052340.1 MGP_BALBcJ_G0025289.1 mouse_genomes_project 2 1841136 1866780 + Sephs1 protein_coding processed_transcript MGP_BALBcJ_T0007168.1 MGP_BALBcJ_G0005874.1 mouse_genomes_project 2 42493459 42509435 + Gm28643 lincRNA lincRNA MGP_BALBcJ_T0054481.1 MGP_BALBcJ_G0025666.1 mouse_genomes_project 2 34705595 34711015 - MGP_BALBcJ_P0054481 Zbtb6 protein_coding protein_coding MGP_BALBcJ_T0054482.1 MGP_BALBcJ_G0025666.1 mouse_genomes_project 2 34705598 34723266 - MGP_BALBcJ_P0054482 Zbtb6 protein_coding protein_coding MGP_BALBcJ_T0007409.1 MGP_BALBcJ_G0006074.1 mouse_genomes_project 2 180128395 180134666 - Gm14340 lincRNA lincRNA MGP_BALBcJ_T0054187.1 MGP_BALBcJ_G0025598.1 mouse_genomes_project 2 30052908 30059956 - MGP_BALBcJ_P0054187 Cfap157 protein_coding protein_coding MGP_BALBcJ_T0054188.1 MGP_BALBcJ_G0025598.1 mouse_genomes_project 2 30053742 30054674 - Cfap157 protein_coding retained_intron MGP_BALBcJ_T0055708.1 MGP_BALBcJ_G0025922.1 mouse_genomes_project 2 83554768 83556980 + MGP_BALBcJ_P0055708 Olfr1032 protein_coding protein_coding MGP_BALBcJ_T0052625.1 MGP_BALBcJ_G0025336.1 mouse_genomes_project 2 11451035 11568401 + MGP_BALBcJ_P0052625 Slc39a12 protein_coding protein_coding MGP_BALBcJ_T0052626.1 MGP_BALBcJ_G0025336.1 mouse_genomes_project 2 11451225 11452253 + MGP_BALBcJ_P0052626 Slc39a12 protein_coding protein_coding MGP_BALBcJ_T0004113.1 MGP_BALBcJ_G0003640.1 mouse_genomes_project 2 151599329 151600942 - Gm14199 antisense antisense MGP_BALBcJ_T0052449.1 MGP_BALBcJ_G0025308.1 mouse_genomes_project 2 6898465 6904961 - 9230102O04Rik protein_coding processed_transcript MGP_BALBcJ_T0052450.1 MGP_BALBcJ_G0025308.1 mouse_genomes_project 2 6898466 6899418 - MGP_BALBcJ_P0052450 9230102O04Rik protein_coding protein_coding MGP_BALBcJ_T0017839.1 MGP_BALBcJ_G0015412.1 mouse_genomes_project 2 129734086 129735377 + Gm14233 processed_transcript processed_transcript MGP_BALBcJ_T0056607.1 MGP_BALBcJ_G0026227.1 mouse_genomes_project 2 109231437 109232379 + MGP_BALBcJ_P0056607 protein_coding protein_coding MGP_BALBcJ_T0004175.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180909629 180916860 + Uckl1os antisense antisense MGP_BALBcJ_T0004176.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180909634 180912421 + Uckl1os antisense antisense MGP_BALBcJ_T0004177.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180909667 180912438 + Uckl1os antisense antisense MGP_BALBcJ_T0004178.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180910638 180912717 + Uckl1os antisense antisense MGP_BALBcJ_T0004179.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180910681 180913891 + Uckl1os antisense antisense MGP_BALBcJ_T0004180.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180910747 180912950 + Uckl1os antisense antisense MGP_BALBcJ_T0004181.1 MGP_BALBcJ_G0003687.1 mouse_genomes_project 2 180913981 180916911 + Uckl1os antisense antisense MGP_BALBcJ_T0099696.1 MGP_BALBcJ_G0037732.1 mouse_genomes_project 2 123343918 123344025 + Gm22352 snRNA snRNA MGP_BALBcJ_T0058649.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154837791 154877859 - MGP_BALBcJ_P0058649 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058650.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154837791 154864078 - MGP_BALBcJ_P0058650 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058666.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154844880 154888410 - MGP_BALBcJ_P0058666 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058667.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154844880 154888410 - MGP_BALBcJ_P0058667 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058668.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154844880 154888410 - MGP_BALBcJ_P0058668 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058669.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154845042 154877884 - MGP_BALBcJ_P0058669 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058670.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154845048 154862921 - MGP_BALBcJ_P0058670 Gm28036 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058671.1 MGP_BALBcJ_G0026731.1 mouse_genomes_project 2 154845375 154877889 - MGP_BALBcJ_P0058671 Gm28036 protein_coding protein_coding MGP_BALBcJ_T0013445.1 MGP_BALBcJ_G0011542.1 mouse_genomes_project 2 21656167 21658011 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056956.1 MGP_BALBcJ_G0026335.1 mouse_genomes_project 2 118225964 118251707 - Pla2g4e protein_coding retained_intron MGP_BALBcJ_T0056957.1 MGP_BALBcJ_G0026335.1 mouse_genomes_project 2 118225964 118299857 - MGP_BALBcJ_P0056957 Pla2g4e protein_coding protein_coding MGP_BALBcJ_T0056958.1 MGP_BALBcJ_G0026335.1 mouse_genomes_project 2 118231725 118299604 - Pla2g4e protein_coding retained_intron MGP_BALBcJ_T0056959.1 MGP_BALBcJ_G0026335.1 mouse_genomes_project 2 118249890 118299630 - Pla2g4e protein_coding processed_transcript MGP_BALBcJ_T0053237.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23121114 23130842 - Ubac1 protein_coding processed_transcript MGP_BALBcJ_T0053238.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23121114 23144837 - MGP_BALBcJ_P0053238 Ubac1 protein_coding protein_coding MGP_BALBcJ_T0053239.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23121377 23132145 - Ubac1 protein_coding processed_transcript MGP_BALBcJ_T0053240.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23128024 23139335 - MGP_BALBcJ_P0053240 Ubac1 protein_coding protein_coding MGP_BALBcJ_T0053241.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23129271 23144622 - MGP_BALBcJ_P0053241 Ubac1 protein_coding protein_coding MGP_BALBcJ_T0053242.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23131816 23133976 - Ubac1 protein_coding processed_transcript MGP_BALBcJ_T0053243.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23133557 23140501 - Ubac1 protein_coding processed_transcript MGP_BALBcJ_T0053244.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23137934 23144656 - Ubac1 protein_coding processed_transcript MGP_BALBcJ_T0053245.1 MGP_BALBcJ_G0025449.1 mouse_genomes_project 2 23138987 23144692 - Ubac1 protein_coding processed_transcript MGP_BALBcJ_T0003964.1 MGP_BALBcJ_G0003536.1 mouse_genomes_project 2 57948174 57951341 + Gm13583 antisense antisense MGP_BALBcJ_T0003965.1 MGP_BALBcJ_G0003536.1 mouse_genomes_project 2 57948176 57948299 + Gm13583 antisense antisense MGP_BALBcJ_T0003966.1 MGP_BALBcJ_G0003536.1 mouse_genomes_project 2 57949772 57950692 + Gm13583 antisense antisense MGP_BALBcJ_T0102436.1 MGP_BALBcJ_G0040252.1 mouse_genomes_project 2 119549569 119555746 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0017807.1 MGP_BALBcJ_G0015399.1 mouse_genomes_project 2 117362461 117367399 - Gm14207 processed_transcript processed_transcript MGP_BALBcJ_T0017808.1 MGP_BALBcJ_G0015399.1 mouse_genomes_project 2 117362461 117366748 - Gm14207 processed_transcript processed_transcript MGP_BALBcJ_T0017809.1 MGP_BALBcJ_G0015399.1 mouse_genomes_project 2 117362614 117366769 - Gm14207 processed_transcript processed_transcript MGP_BALBcJ_T0057812.1 MGP_BALBcJ_G0026516.1 mouse_genomes_project 2 130700001 130704154 - MGP_BALBcJ_P0057812 Pcna protein_coding protein_coding MGP_BALBcJ_T0057813.1 MGP_BALBcJ_G0026516.1 mouse_genomes_project 2 130700716 130703436 - Pcna protein_coding processed_transcript MGP_BALBcJ_T0057814.1 MGP_BALBcJ_G0026516.1 mouse_genomes_project 2 130702168 130703807 - Pcna protein_coding retained_intron MGP_BALBcJ_T0057815.1 MGP_BALBcJ_G0026516.1 mouse_genomes_project 2 130702268 130703442 - Pcna protein_coding retained_intron MGP_BALBcJ_T0010426.1 MGP_BALBcJ_G0008551.1 mouse_genomes_project 2 102370993 102371073 - Mir1902 miRNA miRNA MGP_BALBcJ_T0013721.1 MGP_BALBcJ_G0011818.1 mouse_genomes_project 2 120598427 120599020 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058632.1 MGP_BALBcJ_G0026728.1 mouse_genomes_project 2 154785367 154818998 - MGP_BALBcJ_P0058632 Fer1l4 protein_coding protein_coding MGP_BALBcJ_T0058633.1 MGP_BALBcJ_G0026728.1 mouse_genomes_project 2 154785368 154791115 - Fer1l4 protein_coding retained_intron MGP_BALBcJ_T0058634.1 MGP_BALBcJ_G0026728.1 mouse_genomes_project 2 154785369 154802472 - Fer1l4 protein_coding retained_intron MGP_BALBcJ_T0058635.1 MGP_BALBcJ_G0026728.1 mouse_genomes_project 2 154795019 154797074 - MGP_BALBcJ_P0058635 Fer1l4 protein_coding protein_coding MGP_BALBcJ_T0058636.1 MGP_BALBcJ_G0026728.1 mouse_genomes_project 2 154795168 154797076 - Fer1l4 protein_coding retained_intron MGP_BALBcJ_T0058637.1 MGP_BALBcJ_G0026728.1 mouse_genomes_project 2 154800846 154803207 - MGP_BALBcJ_P0058637 Fer1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052552.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9159396 9357809 - MGP_BALBcJ_P0052552 Itga8 protein_coding protein_coding MGP_BALBcJ_T0052553.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9160243 9357779 - MGP_BALBcJ_P0052553 Itga8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052554.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9161834 9187080 - MGP_BALBcJ_P0052554 Itga8 protein_coding protein_coding MGP_BALBcJ_T0052555.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9233293 9243947 - Itga8 protein_coding retained_intron MGP_BALBcJ_T0052556.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9269978 9292531 - Itga8 protein_coding processed_transcript MGP_BALBcJ_T0052557.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9299866 9357809 - Itga8 protein_coding retained_intron MGP_BALBcJ_T0052558.1 MGP_BALBcJ_G0025323.1 mouse_genomes_project 2 9342850 9357475 - Itga8 protein_coding processed_transcript MGP_BALBcJ_T0055789.1 MGP_BALBcJ_G0025993.1 mouse_genomes_project 2 85394930 85395863 - MGP_BALBcJ_P0055789 Olfr1135 protein_coding protein_coding MGP_BALBcJ_T0052364.1 MGP_BALBcJ_G0025294.1 mouse_genomes_project 2 2105123 2200339 + MGP_BALBcJ_P0052364 Ccdc3 protein_coding protein_coding MGP_BALBcJ_T0013536.1 MGP_BALBcJ_G0011633.1 mouse_genomes_project 2 56165875 56166738 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007335.1 MGP_BALBcJ_G0006010.1 mouse_genomes_project 2 149372346 149374828 - Gm26681 lincRNA lincRNA MGP_BALBcJ_T0055810.1 MGP_BALBcJ_G0026013.1 mouse_genomes_project 2 85779763 85780708 - MGP_BALBcJ_P0055810 protein_coding protein_coding MGP_BALBcJ_T0055811.1 MGP_BALBcJ_G0026013.1 mouse_genomes_project 2 85779763 85781198 - MGP_BALBcJ_P0055811 protein_coding protein_coding MGP_BALBcJ_T0054343.1 MGP_BALBcJ_G0025621.1 mouse_genomes_project 2 32282865 32364934 - MGP_BALBcJ_P0054343 Hc protein_coding protein_coding MGP_BALBcJ_T0054344.1 MGP_BALBcJ_G0025621.1 mouse_genomes_project 2 32283237 32319530 - MGP_BALBcJ_P0054344 Hc protein_coding protein_coding MGP_BALBcJ_T0054345.1 MGP_BALBcJ_G0025621.1 mouse_genomes_project 2 32290730 32292663 - Hc protein_coding processed_transcript MGP_BALBcJ_T0054346.1 MGP_BALBcJ_G0025621.1 mouse_genomes_project 2 32290824 32300746 - Hc protein_coding retained_intron MGP_BALBcJ_T0054347.1 MGP_BALBcJ_G0025621.1 mouse_genomes_project 2 32294282 32306222 - Hc protein_coding processed_transcript MGP_BALBcJ_T0055826.1 MGP_BALBcJ_G0026028.1 mouse_genomes_project 2 86334485 86334872 - MGP_BALBcJ_P0055826 Olfr1187-ps1 protein_coding protein_coding MGP_BALBcJ_T0055827.1 MGP_BALBcJ_G0026028.1 mouse_genomes_project 2 86334488 86334791 - MGP_BALBcJ_P0055827 Olfr1187-ps1 protein_coding protein_coding MGP_BALBcJ_T0055803.1 MGP_BALBcJ_G0026006.1 mouse_genomes_project 2 85639568 85640594 - MGP_BALBcJ_P0055803 Olfr1154 protein_coding protein_coding MGP_BALBcJ_T0007288.1 MGP_BALBcJ_G0005972.1 mouse_genomes_project 2 115831130 115838216 - Gm13985 lincRNA lincRNA MGP_BALBcJ_T0057465.1 MGP_BALBcJ_G0026434.1 mouse_genomes_project 2 125617605 125621617 + MGP_BALBcJ_P0057465 Adra2b protein_coding protein_coding MGP_BALBcJ_T0057466.1 MGP_BALBcJ_G0026434.1 mouse_genomes_project 2 125617683 125621617 + MGP_BALBcJ_P0057466 Adra2b protein_coding protein_coding MGP_BALBcJ_T0004049.1 MGP_BALBcJ_G0003591.1 mouse_genomes_project 2 116327652 116330897 + 1700054M17Rik antisense antisense MGP_BALBcJ_T0007407.1 MGP_BALBcJ_G0006072.1 mouse_genomes_project 2 178711064 178713009 + 4930591A17Rik lincRNA lincRNA MGP_BALBcJ_T0013614.1 MGP_BALBcJ_G0011711.1 mouse_genomes_project 2 83280595 83281527 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057449.1 MGP_BALBcJ_G0026430.1 mouse_genomes_project 2 125500966 125514164 + MGP_BALBcJ_P0057449 Tmem127 protein_coding protein_coding MGP_BALBcJ_T0057450.1 MGP_BALBcJ_G0026430.1 mouse_genomes_project 2 125501027 125510207 + MGP_BALBcJ_P0057450 Tmem127 protein_coding protein_coding MGP_BALBcJ_T0057451.1 MGP_BALBcJ_G0026430.1 mouse_genomes_project 2 125501031 125510579 + MGP_BALBcJ_P0057451 Tmem127 protein_coding protein_coding MGP_BALBcJ_T0055504.1 MGP_BALBcJ_G0025853.1 mouse_genomes_project 2 77288331 77394358 + MGP_BALBcJ_P0055504 Ppp1r1c protein_coding protein_coding MGP_BALBcJ_T0055505.1 MGP_BALBcJ_G0025853.1 mouse_genomes_project 2 77288473 77392577 + MGP_BALBcJ_P0055505 Ppp1r1c protein_coding protein_coding MGP_BALBcJ_T0055506.1 MGP_BALBcJ_G0025853.1 mouse_genomes_project 2 77288474 77399638 + MGP_BALBcJ_P0055506 Ppp1r1c protein_coding protein_coding MGP_BALBcJ_T0055507.1 MGP_BALBcJ_G0025853.1 mouse_genomes_project 2 77288613 77402541 + Ppp1r1c protein_coding processed_transcript MGP_BALBcJ_T0055508.1 MGP_BALBcJ_G0025853.1 mouse_genomes_project 2 77370558 77393333 + Ppp1r1c protein_coding processed_transcript MGP_BALBcJ_T0013677.1 MGP_BALBcJ_G0011774.1 mouse_genomes_project 2 104227032 104227302 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003910.1 MGP_BALBcJ_G0003495.1 mouse_genomes_project 2 23507512 23513245 + Gm13563 antisense antisense MGP_BALBcJ_T0003911.1 MGP_BALBcJ_G0003495.1 mouse_genomes_project 2 23511538 23513781 + Gm13563 antisense antisense MGP_BALBcJ_T0003912.1 MGP_BALBcJ_G0003495.1 mouse_genomes_project 2 23513443 23515005 + Gm13563 antisense antisense MGP_BALBcJ_T0054184.1 MGP_BALBcJ_G0025597.1 mouse_genomes_project 2 30051313 30053125 + MGP_BALBcJ_P0054184 Ptrh1 protein_coding protein_coding MGP_BALBcJ_T0054185.1 MGP_BALBcJ_G0025597.1 mouse_genomes_project 2 30051343 30052283 + Ptrh1 protein_coding processed_transcript MGP_BALBcJ_T0054186.1 MGP_BALBcJ_G0025597.1 mouse_genomes_project 2 30051392 30052977 + Ptrh1 protein_coding retained_intron MGP_BALBcJ_T0055725.1 MGP_BALBcJ_G0025939.1 mouse_genomes_project 2 83926904 83927840 - MGP_BALBcJ_P0055725 Olfr1055 protein_coding protein_coding MGP_BALBcJ_T0010408.1 MGP_BALBcJ_G0008533.1 mouse_genomes_project 2 74060800 74060903 + Gm23164 miRNA miRNA MGP_BALBcJ_T0052927.1 MGP_BALBcJ_G0025389.1 mouse_genomes_project 2 22054252 22055234 - MGP_BALBcJ_P0052927 Mrpl41 protein_coding protein_coding MGP_BALBcJ_T0052928.1 MGP_BALBcJ_G0025389.1 mouse_genomes_project 2 22054630 22055125 - MGP_BALBcJ_P0052928 Mrpl41 protein_coding protein_coding MGP_BALBcJ_T0001098.1 MGP_BALBcJ_G0001025.1 mouse_genomes_project 2 168999365 169000538 - TEC TEC MGP_BALBcJ_T0001099.1 MGP_BALBcJ_G0001025.1 mouse_genomes_project 2 168999478 169000338 - TEC TEC MGP_BALBcJ_T0057067.1 MGP_BALBcJ_G0026350.1 mouse_genomes_project 2 119020547 119051356 + MGP_BALBcJ_P0057067 Tmem62 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057068.1 MGP_BALBcJ_G0026350.1 mouse_genomes_project 2 119020829 119051348 + MGP_BALBcJ_P0057068 Tmem62 protein_coding protein_coding MGP_BALBcJ_T0057069.1 MGP_BALBcJ_G0026350.1 mouse_genomes_project 2 119021200 119024076 + Tmem62 protein_coding retained_intron MGP_BALBcJ_T0057070.1 MGP_BALBcJ_G0026350.1 mouse_genomes_project 2 119024538 119033807 + Tmem62 protein_coding processed_transcript MGP_BALBcJ_T0057071.1 MGP_BALBcJ_G0026350.1 mouse_genomes_project 2 119027819 119030409 + Tmem62 protein_coding processed_transcript MGP_BALBcJ_T0057072.1 MGP_BALBcJ_G0026350.1 mouse_genomes_project 2 119039585 119050547 + Tmem62 protein_coding retained_intron MGP_BALBcJ_T0059689.1 MGP_BALBcJ_G0026972.1 mouse_genomes_project 2 179894857 179901423 + MGP_BALBcJ_P0059689 Ogfr protein_coding protein_coding MGP_BALBcJ_T0059690.1 MGP_BALBcJ_G0026972.1 mouse_genomes_project 2 179895074 179899462 + Ogfr protein_coding retained_intron MGP_BALBcJ_T0010320.1 MGP_BALBcJ_G0008445.1 mouse_genomes_project 2 7490913 7491032 + Mir669e miRNA miRNA MGP_BALBcJ_T0054687.1 MGP_BALBcJ_G0025696.1 mouse_genomes_project 2 47518003 47647642 + MGP_BALBcJ_P0054687 Lypd6 protein_coding protein_coding MGP_BALBcJ_T0054688.1 MGP_BALBcJ_G0025696.1 mouse_genomes_project 2 47518036 47644743 + MGP_BALBcJ_P0054688 Lypd6 protein_coding protein_coding MGP_BALBcJ_T0054689.1 MGP_BALBcJ_G0025696.1 mouse_genomes_project 2 47518038 47647637 + MGP_BALBcJ_P0054689 Lypd6 protein_coding protein_coding MGP_BALBcJ_T0054690.1 MGP_BALBcJ_G0025696.1 mouse_genomes_project 2 47580144 47647636 + MGP_BALBcJ_P0054690 Lypd6 protein_coding protein_coding MGP_BALBcJ_T0054691.1 MGP_BALBcJ_G0025696.1 mouse_genomes_project 2 47619647 47627808 + MGP_BALBcJ_P0054691 Lypd6 protein_coding protein_coding MGP_BALBcJ_T0058188.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150068157 150101144 + MGP_BALBcJ_P0058188 Nsfl1c protein_coding protein_coding MGP_BALBcJ_T0058189.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150068164 150088140 + Nsfl1c protein_coding retained_intron MGP_BALBcJ_T0058190.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150068265 150082272 + Nsfl1c protein_coding retained_intron MGP_BALBcJ_T0058191.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150068268 150101139 + MGP_BALBcJ_P0058191 Nsfl1c protein_coding protein_coding MGP_BALBcJ_T0058192.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150068279 150101248 + MGP_BALBcJ_P0058192 Nsfl1c protein_coding protein_coding MGP_BALBcJ_T0058193.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150068286 150084458 + Nsfl1c protein_coding retained_intron MGP_BALBcJ_T0058194.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150083361 150091757 + Nsfl1c protein_coding processed_transcript MGP_BALBcJ_T0058195.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150084014 150100823 + Nsfl1c protein_coding retained_intron MGP_BALBcJ_T0058196.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150084771 150091787 + Nsfl1c protein_coding retained_intron MGP_BALBcJ_T0058197.1 MGP_BALBcJ_G0026614.1 mouse_genomes_project 2 150091194 150101096 + Nsfl1c protein_coding retained_intron MGP_BALBcJ_T0007366.1 MGP_BALBcJ_G0006038.1 mouse_genomes_project 2 165140095 165141493 - Gm11467 lincRNA lincRNA MGP_BALBcJ_T0017721.1 MGP_BALBcJ_G0015349.1 mouse_genomes_project 2 27944918 27951727 - Gm14488 processed_transcript processed_transcript MGP_BALBcJ_T0017722.1 MGP_BALBcJ_G0015349.1 mouse_genomes_project 2 27944921 27948810 - Gm14488 processed_transcript retained_intron MGP_BALBcJ_T0053154.1 MGP_BALBcJ_G0025427.1 mouse_genomes_project 2 22666959 22671195 + MGP_BALBcJ_P0053154 Edf1 protein_coding protein_coding MGP_BALBcJ_T0053155.1 MGP_BALBcJ_G0025427.1 mouse_genomes_project 2 22666983 22670474 + Edf1 protein_coding processed_transcript MGP_BALBcJ_T0053156.1 MGP_BALBcJ_G0025427.1 mouse_genomes_project 2 22667009 22670377 + Edf1 protein_coding processed_transcript MGP_BALBcJ_T0053157.1 MGP_BALBcJ_G0025427.1 mouse_genomes_project 2 22667251 22670974 + Edf1 protein_coding processed_transcript MGP_BALBcJ_T0053158.1 MGP_BALBcJ_G0025427.1 mouse_genomes_project 2 22669697 22671195 + Edf1 protein_coding processed_transcript MGP_BALBcJ_T0013579.1 MGP_BALBcJ_G0011676.1 mouse_genomes_project 2 70743648 70743993 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055697.1 MGP_BALBcJ_G0025912.1 mouse_genomes_project 2 83352429 83353365 + MGP_BALBcJ_P0055697 Olfr1018 protein_coding protein_coding MGP_BALBcJ_T0007109.1 MGP_BALBcJ_G0005830.1 mouse_genomes_project 2 4064690 4068921 + Gm26565 lincRNA lincRNA MGP_BALBcJ_T0056980.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461502 118481187 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056981.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461807 118477025 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056982.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461808 118514663 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056983.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461816 118481959 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056984.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461830 118518259 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056985.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461920 118477023 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056986.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118461944 118473191 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056987.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118462374 118519105 + MGP_BALBcJ_P0056987 Ganc protein_coding protein_coding MGP_BALBcJ_T0056988.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118462380 118471897 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056989.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118462586 118518271 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056990.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118463720 118517632 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056991.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118468994 118494382 + Ganc protein_coding retained_intron MGP_BALBcJ_T0056992.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118481028 118488642 + Ganc protein_coding processed_transcript MGP_BALBcJ_T0056993.1 MGP_BALBcJ_G0026340.1 mouse_genomes_project 2 118509988 118517754 + Ganc protein_coding retained_intron MGP_BALBcJ_T0007343.1 MGP_BALBcJ_G0006017.1 mouse_genomes_project 2 155218921 155222681 - Gm14224 lincRNA lincRNA MGP_BALBcJ_T0013456.1 MGP_BALBcJ_G0011553.1 mouse_genomes_project 2 28162083 28162463 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058969.1 MGP_BALBcJ_G0026786.1 mouse_genomes_project 2 160386228 161509801 - MGP_BALBcJ_P0058969 Ptprt protein_coding protein_coding MGP_BALBcJ_T0058970.1 MGP_BALBcJ_G0026786.1 mouse_genomes_project 2 160386228 161509801 - MGP_BALBcJ_P0058970 Ptprt protein_coding protein_coding MGP_BALBcJ_T0058971.1 MGP_BALBcJ_G0026786.1 mouse_genomes_project 2 160390591 161509748 - MGP_BALBcJ_P0058971 Ptprt protein_coding protein_coding MGP_BALBcJ_T0058972.1 MGP_BALBcJ_G0026786.1 mouse_genomes_project 2 160391742 161509801 - MGP_BALBcJ_P0058972 Ptprt protein_coding protein_coding MGP_BALBcJ_T0058973.1 MGP_BALBcJ_G0026786.1 mouse_genomes_project 2 160559972 160665130 - Ptprt protein_coding processed_transcript MGP_BALBcJ_T0058974.1 MGP_BALBcJ_G0026786.1 mouse_genomes_project 2 160876450 160999995 - Ptprt protein_coding processed_transcript MGP_BALBcJ_T0057587.1 MGP_BALBcJ_G0026467.1 mouse_genomes_project 2 127973748 127989003 - MGP_BALBcJ_P0057587 Pdyn protein_coding protein_coding MGP_BALBcJ_T0057588.1 MGP_BALBcJ_G0026467.1 mouse_genomes_project 2 127975708 127987828 - MGP_BALBcJ_P0057588 Pdyn protein_coding protein_coding MGP_BALBcJ_T0057589.1 MGP_BALBcJ_G0026467.1 mouse_genomes_project 2 127987155 127989014 - Pdyn protein_coding retained_intron MGP_BALBcJ_T0055104.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67183618 67184864 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055105.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67183878 67215421 + MGP_BALBcJ_P0055105 Ppig protein_coding protein_coding MGP_BALBcJ_T0055106.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67183927 67194132 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055107.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67183976 67193167 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055108.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67184166 67215421 + MGP_BALBcJ_P0055108 Ppig protein_coding protein_coding MGP_BALBcJ_T0055109.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67184399 67196948 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055110.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67190124 67196651 + MGP_BALBcJ_P0055110 Ppig protein_coding protein_coding MGP_BALBcJ_T0055111.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67192586 67203151 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055112.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67192834 67193885 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055113.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67193003 67193902 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055114.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67196516 67203237 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055115.1 MGP_BALBcJ_G0025775.1 mouse_genomes_project 2 67203292 67210966 + Ppig protein_coding processed_transcript MGP_BALBcJ_T0055351.1 MGP_BALBcJ_G0025821.1 mouse_genomes_project 2 72265653 72268135 + MGP_BALBcJ_P0055351 Hoxd9 protein_coding protein_coding MGP_BALBcJ_T0099673.1 MGP_BALBcJ_G0037709.1 mouse_genomes_project 2 41758211 41758320 + Gm22867 snRNA snRNA MGP_BALBcJ_T0013437.1 MGP_BALBcJ_G0011534.1 mouse_genomes_project 2 19771043 19771378 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056619.1 MGP_BALBcJ_G0026239.1 mouse_genomes_project 2 109614478 109615417 - MGP_BALBcJ_P0056619 Olfr1297 protein_coding protein_coding MGP_BALBcJ_T0055828.1 MGP_BALBcJ_G0026029.1 mouse_genomes_project 2 86353397 86354336 + MGP_BALBcJ_P0055828 Olfr1188 protein_coding protein_coding MGP_BALBcJ_T0013691.1 MGP_BALBcJ_G0011788.1 mouse_genomes_project 2 109446328 109489995 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007125.1 MGP_BALBcJ_G0005844.1 mouse_genomes_project 2 16440345 16445513 + 4930447M23Rik lincRNA lincRNA MGP_BALBcJ_T0007126.1 MGP_BALBcJ_G0005844.1 mouse_genomes_project 2 16440866 16447384 + 4930447M23Rik lincRNA lincRNA MGP_BALBcJ_T0007127.1 MGP_BALBcJ_G0005844.1 mouse_genomes_project 2 16440965 16445247 + 4930447M23Rik lincRNA lincRNA MGP_BALBcJ_T0054461.1 MGP_BALBcJ_G0025657.1 mouse_genomes_project 2 34288851 34289778 + MGP_BALBcJ_P0054461 Olfr357 protein_coding protein_coding MGP_BALBcJ_T0001081.1 MGP_BALBcJ_G0001009.1 mouse_genomes_project 2 66467569 66471342 + TEC TEC MGP_BALBcJ_T0055238.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69412244 69444301 + MGP_BALBcJ_P0055238 Pdk1 protein_coding protein_coding MGP_BALBcJ_T0055239.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69412340 69423867 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0055240.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69412346 69426724 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0055241.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69412366 69442410 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0055242.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69412565 69424118 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0055243.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69412757 69429377 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0055244.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69414119 69423546 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0055245.1 MGP_BALBcJ_G0025799.1 mouse_genomes_project 2 69427840 69436896 + Pdk1 protein_coding processed_transcript MGP_BALBcJ_T0102380.1 MGP_BALBcJ_G0040196.1 mouse_genomes_project 2 18138538 18235846 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0054457.1 MGP_BALBcJ_G0025653.1 mouse_genomes_project 2 34184658 34185594 - MGP_BALBcJ_P0054457 Olfr353 protein_coding protein_coding MGP_BALBcJ_T0010367.1 MGP_BALBcJ_G0008492.1 mouse_genomes_project 2 22539995 22540051 + Mir3087 miRNA miRNA MGP_BALBcJ_T0054025.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29555728 29567156 + MGP_BALBcJ_P0054025 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054026.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556597 29577276 + MGP_BALBcJ_P0054026 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054027.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556657 29577267 + MGP_BALBcJ_P0054027 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054028.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556671 29566052 + Golga2 protein_coding retained_intron MGP_BALBcJ_T0054029.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556678 29572314 + MGP_BALBcJ_P0054029 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054030.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556691 29577268 + MGP_BALBcJ_P0054030 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054031.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556694 29577276 + MGP_BALBcJ_P0054031 Golga2 protein_coding unknown_likely_coding MGP_BALBcJ_T0054032.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556696 29568690 + MGP_BALBcJ_P0054032 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054033.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29556700 29571555 + MGP_BALBcJ_P0054033 Golga2 protein_coding protein_coding MGP_BALBcJ_T0054034.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29565881 29577265 + Golga2 protein_coding retained_intron MGP_BALBcJ_T0054035.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29568168 29568651 + Golga2 protein_coding retained_intron MGP_BALBcJ_T0054036.1 MGP_BALBcJ_G0025575.1 mouse_genomes_project 2 29570565 29572304 + Golga2 protein_coding retained_intron MGP_BALBcJ_T0010366.1 MGP_BALBcJ_G0008491.1 mouse_genomes_project 2 22145016 22145079 + Mir7664 miRNA miRNA MGP_BALBcJ_T0102415.1 MGP_BALBcJ_G0040231.1 mouse_genomes_project 2 85228898 85229756 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007231.1 MGP_BALBcJ_G0005927.1 mouse_genomes_project 2 80708447 80737555 - Gm28675 lincRNA lincRNA MGP_BALBcJ_T0013419.1 MGP_BALBcJ_G0011516.1 mouse_genomes_project 2 14857467 14858618 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004102.1 MGP_BALBcJ_G0003630.1 mouse_genomes_project 2 145727958 145882461 + antisense antisense MGP_BALBcJ_T0007357.1 MGP_BALBcJ_G0006029.1 mouse_genomes_project 2 161528141 161529216 + Gm14246 lincRNA lincRNA MGP_BALBcJ_T0053974.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29234737 29312709 + MGP_BALBcJ_P0053974 Nup214 protein_coding protein_coding MGP_BALBcJ_T0053975.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29234787 29240681 + Nup214 protein_coding retained_intron MGP_BALBcJ_T0053976.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29240496 29252086 + Nup214 protein_coding processed_transcript MGP_BALBcJ_T0053977.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29255516 29259393 + Nup214 protein_coding processed_transcript MGP_BALBcJ_T0053978.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29258656 29264427 + MGP_BALBcJ_P0053978 Nup214 protein_coding protein_coding MGP_BALBcJ_T0053979.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29270017 29271391 + Nup214 protein_coding processed_transcript MGP_BALBcJ_T0053980.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29285035 29291835 + Nup214 protein_coding processed_transcript MGP_BALBcJ_T0053981.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29294088 29313982 + MGP_BALBcJ_P0053981 Nup214 protein_coding protein_coding MGP_BALBcJ_T0053982.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29302630 29312705 + MGP_BALBcJ_P0053982 Nup214 protein_coding protein_coding MGP_BALBcJ_T0053984.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29311332 29313192 + Nup214 protein_coding retained_intron MGP_BALBcJ_T0053985.1 MGP_BALBcJ_G0025568.1 mouse_genomes_project 2 29312029 29312703 + Nup214 protein_coding retained_intron MGP_BALBcJ_T0059859.1 MGP_BALBcJ_G0027001.1 mouse_genomes_project 2 180851078 180885909 + MGP_BALBcJ_P0059859 Dnajc5 protein_coding protein_coding MGP_BALBcJ_T0059860.1 MGP_BALBcJ_G0027001.1 mouse_genomes_project 2 180851119 180883012 + MGP_BALBcJ_P0059860 Dnajc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059861.1 MGP_BALBcJ_G0027001.1 mouse_genomes_project 2 180851144 180883010 + MGP_BALBcJ_P0059861 Dnajc5 protein_coding protein_coding MGP_BALBcJ_T0059862.1 MGP_BALBcJ_G0027001.1 mouse_genomes_project 2 180851405 180879550 + MGP_BALBcJ_P0059862 Dnajc5 protein_coding protein_coding MGP_BALBcJ_T0059863.1 MGP_BALBcJ_G0027001.1 mouse_genomes_project 2 180851540 180880368 + MGP_BALBcJ_P0059863 Dnajc5 protein_coding protein_coding MGP_BALBcJ_T0059864.1 MGP_BALBcJ_G0027001.1 mouse_genomes_project 2 180880103 180881036 + Dnajc5 protein_coding processed_transcript MGP_BALBcJ_T0057821.1 MGP_BALBcJ_G0026518.1 mouse_genomes_project 2 130786322 130835893 - MGP_BALBcJ_P0057821 Prokr2 protein_coding protein_coding MGP_BALBcJ_T0057822.1 MGP_BALBcJ_G0026518.1 mouse_genomes_project 2 130820794 130835891 - MGP_BALBcJ_P0057822 Prokr2 protein_coding protein_coding MGP_BALBcJ_T0057823.1 MGP_BALBcJ_G0026518.1 mouse_genomes_project 2 130820794 130835866 - MGP_BALBcJ_P0057823 Prokr2 protein_coding protein_coding MGP_BALBcJ_T0057824.1 MGP_BALBcJ_G0026518.1 mouse_genomes_project 2 130821630 130835913 - MGP_BALBcJ_P0057824 Prokr2 protein_coding protein_coding MGP_BALBcJ_T0057825.1 MGP_BALBcJ_G0026518.1 mouse_genomes_project 2 130832033 130835887 - MGP_BALBcJ_P0057825 Prokr2 protein_coding protein_coding MGP_BALBcJ_T0055757.1 MGP_BALBcJ_G0025970.1 mouse_genomes_project 2 84797484 84798423 - MGP_BALBcJ_P0055757 Olfr1111 protein_coding protein_coding MGP_BALBcJ_T0013492.1 MGP_BALBcJ_G0011589.1 mouse_genomes_project 2 37597389 37597906 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058452.1 MGP_BALBcJ_G0026692.1 mouse_genomes_project 2 153244701 153247413 + 1700003F12Rik protein_coding retained_intron MGP_BALBcJ_T0058454.1 MGP_BALBcJ_G0026692.1 mouse_genomes_project 2 153246482 153247598 + MGP_BALBcJ_P0058454 1700003F12Rik protein_coding protein_coding MGP_BALBcJ_T0058455.1 MGP_BALBcJ_G0026692.1 mouse_genomes_project 2 153246521 153247598 + MGP_BALBcJ_P0058455 1700003F12Rik protein_coding protein_coding MGP_BALBcJ_T0057502.1 MGP_BALBcJ_G0026445.1 mouse_genomes_project 2 126049484 126080765 - MGP_BALBcJ_P0057502 Bub1 protein_coding protein_coding MGP_BALBcJ_T0057503.1 MGP_BALBcJ_G0026445.1 mouse_genomes_project 2 126052865 126053628 - Bub1 protein_coding retained_intron MGP_BALBcJ_T0057504.1 MGP_BALBcJ_G0026445.1 mouse_genomes_project 2 126057601 126062977 - Bub1 protein_coding processed_transcript MGP_BALBcJ_T0057505.1 MGP_BALBcJ_G0026445.1 mouse_genomes_project 2 126059647 126064029 - Bub1 protein_coding processed_transcript MGP_BALBcJ_T0057506.1 MGP_BALBcJ_G0026445.1 mouse_genomes_project 2 126072540 126080704 - Bub1 protein_coding retained_intron MGP_BALBcJ_T0059014.1 MGP_BALBcJ_G0026797.1 mouse_genomes_project 2 162311207 162327973 + MGP_BALBcJ_P0059014 Gdap1l1 protein_coding protein_coding MGP_BALBcJ_T0059015.1 MGP_BALBcJ_G0026797.1 mouse_genomes_project 2 162311209 162327624 + MGP_BALBcJ_P0059015 Gdap1l1 protein_coding protein_coding MGP_BALBcJ_T0059016.1 MGP_BALBcJ_G0026797.1 mouse_genomes_project 2 162311209 162326604 + MGP_BALBcJ_P0059016 Gdap1l1 protein_coding protein_coding MGP_BALBcJ_T0059017.1 MGP_BALBcJ_G0026797.1 mouse_genomes_project 2 162311264 162326446 + MGP_BALBcJ_P0059017 Gdap1l1 protein_coding protein_coding MGP_BALBcJ_T0010348.1 MGP_BALBcJ_G0008473.1 mouse_genomes_project 2 7518703 7518799 + Mir669o miRNA miRNA MGP_BALBcJ_T0054878.1 MGP_BALBcJ_G0025731.1 mouse_genomes_project 2 57631193 57664256 - MGP_BALBcJ_P0054878 Cd302 protein_coding protein_coding MGP_BALBcJ_T0054879.1 MGP_BALBcJ_G0025731.1 mouse_genomes_project 2 57631193 57664186 - MGP_BALBcJ_P0054879 Cd302 protein_coding protein_coding MGP_BALBcJ_T0099713.1 MGP_BALBcJ_G0037749.1 mouse_genomes_project 2 165716985 165717088 + Gm24477 snRNA snRNA MGP_BALBcJ_T0054441.1 MGP_BALBcJ_G0025638.1 mouse_genomes_project 2 33678014 33678935 + MGP_BALBcJ_P0054441 Olfr338 protein_coding protein_coding MGP_BALBcJ_T0058133.1 MGP_BALBcJ_G0026598.1 mouse_genomes_project 2 148397632 148469719 + MGP_BALBcJ_P0058133 Syndig1 protein_coding protein_coding MGP_BALBcJ_T0058135.1 MGP_BALBcJ_G0026598.1 mouse_genomes_project 2 148399209 148574045 + MGP_BALBcJ_P0058135 Syndig1 protein_coding protein_coding MGP_BALBcJ_T0058136.1 MGP_BALBcJ_G0026598.1 mouse_genomes_project 2 148399290 148469760 + MGP_BALBcJ_P0058136 Syndig1 protein_coding protein_coding MGP_BALBcJ_T0058137.1 MGP_BALBcJ_G0026598.1 mouse_genomes_project 2 148399322 148469756 + MGP_BALBcJ_P0058137 Syndig1 protein_coding protein_coding MGP_BALBcJ_T0058138.1 MGP_BALBcJ_G0026598.1 mouse_genomes_project 2 148399343 148469886 + MGP_BALBcJ_P0058138 Syndig1 protein_coding protein_coding MGP_BALBcJ_T0058139.1 MGP_BALBcJ_G0026598.1 mouse_genomes_project 2 148464969 148574045 + MGP_BALBcJ_P0058139 Syndig1 protein_coding protein_coding MGP_BALBcJ_T0057260.1 MGP_BALBcJ_G0026387.1 mouse_genomes_project 2 120421382 120454133 + MGP_BALBcJ_P0057260 Duox1 protein_coding protein_coding MGP_BALBcJ_T0098867.1 MGP_BALBcJ_G0036915.1 mouse_genomes_project 2 3936612 3937840 - Gm10115 sense_intronic sense_intronic MGP_BALBcJ_T0013423.1 MGP_BALBcJ_G0011520.1 mouse_genomes_project 2 15418390 15418801 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013649.1 MGP_BALBcJ_G0011746.1 mouse_genomes_project 2 93502528 93502667 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057282.1 MGP_BALBcJ_G0026393.1 mouse_genomes_project 2 120876827 120903169 - MGP_BALBcJ_P0057282 Slc30a4 protein_coding protein_coding MGP_BALBcJ_T0057283.1 MGP_BALBcJ_G0026393.1 mouse_genomes_project 2 120882266 120903193 - MGP_BALBcJ_P0057283 Slc30a4 protein_coding protein_coding MGP_BALBcJ_T0013467.1 MGP_BALBcJ_G0011564.1 mouse_genomes_project 2 32264280 32264447 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059046.1 MGP_BALBcJ_G0026808.1 mouse_genomes_project 2 162858500 162882629 + MGP_BALBcJ_P0059046 Ywhab protein_coding protein_coding MGP_BALBcJ_T0059047.1 MGP_BALBcJ_G0026808.1 mouse_genomes_project 2 162859049 162879324 + MGP_BALBcJ_P0059047 Ywhab protein_coding protein_coding MGP_BALBcJ_T0054618.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42316903 42452791 - MGP_BALBcJ_P0054618 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054619.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42320392 42448399 - MGP_BALBcJ_P0054619 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054620.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42320394 42448693 - MGP_BALBcJ_P0054620 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054621.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42320394 42445950 - MGP_BALBcJ_P0054621 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054622.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42321605 42448416 - MGP_BALBcJ_P0054622 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054623.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42321672 42445723 - MGP_BALBcJ_P0054623 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054624.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42321713 42448304 - MGP_BALBcJ_P0054624 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054625.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42330311 42445887 - MGP_BALBcJ_P0054625 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054626.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42335198 42446609 - MGP_BALBcJ_P0054626 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054627.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42335223 42356498 - MGP_BALBcJ_P0054627 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054628.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42335289 42445679 - MGP_BALBcJ_P0054628 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054629.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42336188 42387828 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054630.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42336190 42446591 - MGP_BALBcJ_P0054630 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054631.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42342190 42446511 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054632.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42351051 42448682 - MGP_BALBcJ_P0054632 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054633.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42354404 42448503 - Zeb2 protein_coding retained_intron MGP_BALBcJ_T0054634.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42354479 42448659 - Zeb2 protein_coding retained_intron MGP_BALBcJ_T0054635.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42356486 42446062 - MGP_BALBcJ_P0054635 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054636.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42356571 42448698 - MGP_BALBcJ_P0054636 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054637.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42356642 42446189 - MGP_BALBcJ_P0054637 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054638.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42429133 42446168 - MGP_BALBcJ_P0054638 Zeb2 protein_coding protein_coding MGP_BALBcJ_T0054639.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42438645 42448662 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054640.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42438645 42445922 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054641.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42438645 42448630 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054642.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42439872 42445511 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054643.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42440733 42445919 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0054644.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42441092 42448415 - Zeb2 protein_coding retained_intron MGP_BALBcJ_T0054645.1 MGP_BALBcJ_G0025689.1 mouse_genomes_project 2 42445523 42448906 - Zeb2 protein_coding processed_transcript MGP_BALBcJ_T0059041.1 MGP_BALBcJ_G0026805.1 mouse_genomes_project 2 162695639 162703798 + Wisp2 protein_coding processed_transcript MGP_BALBcJ_T0059042.1 MGP_BALBcJ_G0026805.1 mouse_genomes_project 2 162695667 162707970 + MGP_BALBcJ_P0059042 Wisp2 protein_coding protein_coding MGP_BALBcJ_T0055961.1 MGP_BALBcJ_G0026106.1 mouse_genomes_project 2 88673631 88679442 + MGP_BALBcJ_P0055961 Kbtbd4 protein_coding protein_coding MGP_BALBcJ_T0055962.1 MGP_BALBcJ_G0026106.1 mouse_genomes_project 2 88673634 88679442 + MGP_BALBcJ_P0055962 Kbtbd4 protein_coding protein_coding MGP_BALBcJ_T0055963.1 MGP_BALBcJ_G0026106.1 mouse_genomes_project 2 88673660 88674511 + Kbtbd4 protein_coding processed_transcript MGP_BALBcJ_T0055964.1 MGP_BALBcJ_G0026106.1 mouse_genomes_project 2 88673968 88674947 + Kbtbd4 protein_coding processed_transcript MGP_BALBcJ_T0055965.1 MGP_BALBcJ_G0026106.1 mouse_genomes_project 2 88678044 88680507 + Kbtbd4 protein_coding processed_transcript MGP_BALBcJ_T0059847.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827760 180845701 + MGP_BALBcJ_P0059847 Tpd52l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059848.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827782 180838878 + Tpd52l2 protein_coding processed_transcript MGP_BALBcJ_T0059849.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827783 180848552 + MGP_BALBcJ_P0059849 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059850.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827799 180847957 + MGP_BALBcJ_P0059850 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059851.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827801 180845712 + MGP_BALBcJ_P0059851 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059852.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827805 180848548 + MGP_BALBcJ_P0059852 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059853.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827817 180846842 + MGP_BALBcJ_P0059853 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059854.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827847 180833175 + Tpd52l2 protein_coding retained_intron MGP_BALBcJ_T0059855.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180827849 180845973 + MGP_BALBcJ_P0059855 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059856.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180830465 180843626 + MGP_BALBcJ_P0059856 Tpd52l2 protein_coding protein_coding MGP_BALBcJ_T0059857.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180830486 180833771 + Tpd52l2 protein_coding retained_intron MGP_BALBcJ_T0059858.1 MGP_BALBcJ_G0027000.1 mouse_genomes_project 2 180843147 180845919 + Tpd52l2 protein_coding retained_intron MGP_BALBcJ_T0057028.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118658772 118664054 - MGP_BALBcJ_P0057028 Lrrc57 protein_coding protein_coding MGP_BALBcJ_T0057029.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118658772 118663889 - MGP_BALBcJ_P0057029 Lrrc57 protein_coding protein_coding MGP_BALBcJ_T0057030.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118658772 118664044 - MGP_BALBcJ_P0057030 Lrrc57 protein_coding protein_coding MGP_BALBcJ_T0057031.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118658772 118663849 - MGP_BALBcJ_P0057031 Lrrc57 protein_coding protein_coding MGP_BALBcJ_T0057032.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118659353 118662506 - MGP_BALBcJ_P0057032 Lrrc57 protein_coding protein_coding MGP_BALBcJ_T0057033.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118660505 118664042 - MGP_BALBcJ_P0057033 Lrrc57 protein_coding protein_coding MGP_BALBcJ_T0057034.1 MGP_BALBcJ_G0026344.1 mouse_genomes_project 2 118663351 118663836 - Lrrc57 protein_coding retained_intron MGP_BALBcJ_T0055915.1 MGP_BALBcJ_G0026096.1 mouse_genomes_project 2 88037170 88038097 - MGP_BALBcJ_P0055915 Olfr1272 protein_coding protein_coding MGP_BALBcJ_T0053133.1 MGP_BALBcJ_G0025423.1 mouse_genomes_project 2 22588812 22591879 - MGP_BALBcJ_P0053133 Lcn12 protein_coding protein_coding MGP_BALBcJ_T0053134.1 MGP_BALBcJ_G0025423.1 mouse_genomes_project 2 22588814 22591400 - MGP_BALBcJ_P0053134 Lcn12 protein_coding protein_coding MGP_BALBcJ_T0007377.1 MGP_BALBcJ_G0006045.1 mouse_genomes_project 2 166754670 166756104 + 9230111E07Rik lincRNA lincRNA MGP_BALBcJ_T0017846.1 MGP_BALBcJ_G0015416.1 mouse_genomes_project 2 149234170 149238192 + Gm14123 processed_transcript processed_transcript MGP_BALBcJ_T0054787.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55550998 55586609 - MGP_BALBcJ_P0054787 Cytip protein_coding protein_coding MGP_BALBcJ_T0054788.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55559634 55621603 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0054789.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55559719 55621613 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0054790.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55559851 55582911 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0054791.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55573358 55586233 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0054792.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55573533 55621614 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0054793.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55586089 55621618 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0054794.1 MGP_BALBcJ_G0025718.1 mouse_genomes_project 2 55586150 55586771 - Cytip protein_coding processed_transcript MGP_BALBcJ_T0053346.1 MGP_BALBcJ_G0025465.1 mouse_genomes_project 2 23716477 23768104 + MGP_BALBcJ_P0053346 Gm20532 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013793.1 MGP_BALBcJ_G0011890.1 mouse_genomes_project 2 149585293 149585776 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054454.1 MGP_BALBcJ_G0025650.1 mouse_genomes_project 2 34143769 34144708 + MGP_BALBcJ_P0054454 Olfr350 protein_coding protein_coding MGP_BALBcJ_T0010404.1 MGP_BALBcJ_G0008529.1 mouse_genomes_project 2 72268932 72269069 - Gm44463 miRNA miRNA MGP_BALBcJ_T0057535.1 MGP_BALBcJ_G0026452.1 mouse_genomes_project 2 127085159 127121440 + MGP_BALBcJ_P0057535 Tmem87b protein_coding protein_coding MGP_BALBcJ_T0057536.1 MGP_BALBcJ_G0026452.1 mouse_genomes_project 2 127085380 127121443 + MGP_BALBcJ_P0057536 Tmem87b protein_coding unknown_likely_coding MGP_BALBcJ_T0057537.1 MGP_BALBcJ_G0026452.1 mouse_genomes_project 2 127085425 127118971 + MGP_BALBcJ_P0057537 Tmem87b protein_coding protein_coding MGP_BALBcJ_T0057538.1 MGP_BALBcJ_G0026452.1 mouse_genomes_project 2 127098829 127117495 + Tmem87b protein_coding processed_transcript MGP_BALBcJ_T0057539.1 MGP_BALBcJ_G0026452.1 mouse_genomes_project 2 127108367 127116904 + Tmem87b protein_coding retained_intron MGP_BALBcJ_T0057540.1 MGP_BALBcJ_G0026452.1 mouse_genomes_project 2 127117138 127118590 + Tmem87b protein_coding processed_transcript MGP_BALBcJ_T0101002.1 MGP_BALBcJ_G0039038.1 mouse_genomes_project 2 157198139 157198272 + Gm25187 snoRNA snoRNA MGP_BALBcJ_T0003946.1 MGP_BALBcJ_G0003522.1 mouse_genomes_project 2 33131455 33135651 + 9030204H09Rik antisense antisense MGP_BALBcJ_T0056766.1 MGP_BALBcJ_G0026291.1 mouse_genomes_project 2 116622577 116669926 + MGP_BALBcJ_P0056766 Bub1b protein_coding protein_coding MGP_BALBcJ_T0056767.1 MGP_BALBcJ_G0026291.1 mouse_genomes_project 2 116624554 116634202 + Bub1b protein_coding retained_intron MGP_BALBcJ_T0056768.1 MGP_BALBcJ_G0026291.1 mouse_genomes_project 2 116655562 116656800 + Bub1b protein_coding retained_intron MGP_BALBcJ_T0056769.1 MGP_BALBcJ_G0026291.1 mouse_genomes_project 2 116656505 116665085 + Bub1b protein_coding retained_intron MGP_BALBcJ_T0055057.1 MGP_BALBcJ_G0025764.1 mouse_genomes_project 2 66112415 66141562 + MGP_BALBcJ_P0055057 4932414N04Rik protein_coding protein_coding MGP_BALBcJ_T0055058.1 MGP_BALBcJ_G0025764.1 mouse_genomes_project 2 66113808 66196049 + MGP_BALBcJ_P0055058 4932414N04Rik protein_coding protein_coding MGP_BALBcJ_T0055059.1 MGP_BALBcJ_G0025764.1 mouse_genomes_project 2 66113837 66124714 + 4932414N04Rik protein_coding processed_transcript MGP_BALBcJ_T0055060.1 MGP_BALBcJ_G0025764.1 mouse_genomes_project 2 66115766 66196047 + MGP_BALBcJ_P0055060 4932414N04Rik protein_coding protein_coding MGP_BALBcJ_T0055061.1 MGP_BALBcJ_G0025764.1 mouse_genomes_project 2 66164397 66165405 + 4932414N04Rik protein_coding retained_intron MGP_BALBcJ_T0017720.1 MGP_BALBcJ_G0015348.1 mouse_genomes_project 2 27514617 27532892 - Gm14471 processed_transcript processed_transcript MGP_BALBcJ_T0059697.1 MGP_BALBcJ_G0026974.1 mouse_genomes_project 2 179928705 179949337 - MGP_BALBcJ_P0059697 Tcfl5 protein_coding protein_coding MGP_BALBcJ_T0059698.1 MGP_BALBcJ_G0026974.1 mouse_genomes_project 2 179929341 179949328 - MGP_BALBcJ_P0059698 Tcfl5 protein_coding unknown_likely_coding MGP_BALBcJ_T0059699.1 MGP_BALBcJ_G0026974.1 mouse_genomes_project 2 179941993 179949328 - MGP_BALBcJ_P0059699 Tcfl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059700.1 MGP_BALBcJ_G0026974.1 mouse_genomes_project 2 179944205 179949086 - Tcfl5 protein_coding retained_intron MGP_BALBcJ_T0013387.1 MGP_BALBcJ_G0011484.1 mouse_genomes_project 2 1027688 1028252 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055636.1 MGP_BALBcJ_G0025885.1 mouse_genomes_project 2 82359543 82384978 + MGP_BALBcJ_P0055636 Slc43a1 protein_coding protein_coding MGP_BALBcJ_T0055637.1 MGP_BALBcJ_G0025885.1 mouse_genomes_project 2 82360088 82371504 + MGP_BALBcJ_P0055637 Slc43a1 protein_coding protein_coding MGP_BALBcJ_T0055638.1 MGP_BALBcJ_G0025885.1 mouse_genomes_project 2 82360101 82384986 + MGP_BALBcJ_P0055638 Slc43a1 protein_coding protein_coding MGP_BALBcJ_T0055639.1 MGP_BALBcJ_G0025885.1 mouse_genomes_project 2 82360110 82383788 + Slc43a1 protein_coding retained_intron MGP_BALBcJ_T0055640.1 MGP_BALBcJ_G0025885.1 mouse_genomes_project 2 82360891 82384981 + MGP_BALBcJ_P0055640 Slc43a1 protein_coding protein_coding MGP_BALBcJ_T0055641.1 MGP_BALBcJ_G0025885.1 mouse_genomes_project 2 82361317 82384994 + MGP_BALBcJ_P0055641 Slc43a1 protein_coding protein_coding MGP_BALBcJ_T0055600.1 MGP_BALBcJ_G0025874.1 mouse_genomes_project 2 82185028 82186584 - MGP_BALBcJ_P0055600 2700094K13Rik protein_coding protein_coding MGP_BALBcJ_T0055601.1 MGP_BALBcJ_G0025874.1 mouse_genomes_project 2 82185034 82186522 - MGP_BALBcJ_P0055601 2700094K13Rik protein_coding protein_coding MGP_BALBcJ_T0055602.1 MGP_BALBcJ_G0025874.1 mouse_genomes_project 2 82185120 82186490 - MGP_BALBcJ_P0055602 2700094K13Rik protein_coding protein_coding MGP_BALBcJ_T0055603.1 MGP_BALBcJ_G0025874.1 mouse_genomes_project 2 82185508 82186511 - MGP_BALBcJ_P0055603 2700094K13Rik protein_coding protein_coding MGP_BALBcJ_T0055604.1 MGP_BALBcJ_G0025874.1 mouse_genomes_project 2 82185763 82186490 - 2700094K13Rik protein_coding retained_intron MGP_BALBcJ_T0055605.1 MGP_BALBcJ_G0025874.1 mouse_genomes_project 2 82185830 82186468 - MGP_BALBcJ_P0055605 2700094K13Rik protein_coding protein_coding MGP_BALBcJ_T0055866.1 MGP_BALBcJ_G0026063.1 mouse_genomes_project 2 87077056 87077974 - MGP_BALBcJ_P0055866 Olfr1230 protein_coding protein_coding MGP_BALBcJ_T0058787.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155881979 155920341 - MGP_BALBcJ_P0058787 Samhd1 protein_coding protein_coding MGP_BALBcJ_T0058788.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155883825 155920169 - MGP_BALBcJ_P0058788 Samhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058789.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155883825 155920196 - MGP_BALBcJ_P0058789 Samhd1 protein_coding protein_coding MGP_BALBcJ_T0058790.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155885784 155920298 - MGP_BALBcJ_P0058790 Samhd1 protein_coding protein_coding MGP_BALBcJ_T0058791.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155886118 155895036 - Samhd1 protein_coding retained_intron MGP_BALBcJ_T0058792.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155887994 155920282 - MGP_BALBcJ_P0058792 Samhd1 protein_coding protein_coding MGP_BALBcJ_T0058793.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155893703 155895035 - Samhd1 protein_coding retained_intron MGP_BALBcJ_T0058794.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155904176 155920013 - Samhd1 protein_coding retained_intron MGP_BALBcJ_T0058795.1 MGP_BALBcJ_G0026751.1 mouse_genomes_project 2 155906459 155914670 - Samhd1 protein_coding retained_intron MGP_BALBcJ_T0054740.1 MGP_BALBcJ_G0025706.1 mouse_genomes_project 2 49860161 50120054 - MGP_BALBcJ_P0054740 Cacnb4 protein_coding protein_coding MGP_BALBcJ_T0054741.1 MGP_BALBcJ_G0025706.1 mouse_genomes_project 2 49860166 49996510 - MGP_BALBcJ_P0054741 Cacnb4 protein_coding protein_coding MGP_BALBcJ_T0054742.1 MGP_BALBcJ_G0025706.1 mouse_genomes_project 2 49860166 50120283 - MGP_BALBcJ_P0054742 Cacnb4 protein_coding protein_coding MGP_BALBcJ_T0054743.1 MGP_BALBcJ_G0025706.1 mouse_genomes_project 2 49860166 49996517 - MGP_BALBcJ_P0054743 Cacnb4 protein_coding protein_coding MGP_BALBcJ_T0054744.1 MGP_BALBcJ_G0025706.1 mouse_genomes_project 2 49994136 49994659 - Cacnb4 protein_coding processed_transcript MGP_BALBcJ_T0054745.1 MGP_BALBcJ_G0025706.1 mouse_genomes_project 2 50119198 50119615 - Cacnb4 protein_coding processed_transcript MGP_BALBcJ_T0057859.1 MGP_BALBcJ_G0026527.1 mouse_genomes_project 2 132026374 132037421 + MGP_BALBcJ_P0057859 Bmp2 protein_coding protein_coding MGP_BALBcJ_T0013650.1 MGP_BALBcJ_G0011747.1 mouse_genomes_project 2 93964341 93964501 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007129.1 MGP_BALBcJ_G0005846.1 mouse_genomes_project 2 18190707 18214218 + Gm13376 lincRNA lincRNA MGP_BALBcJ_T0004111.1 MGP_BALBcJ_G0003638.1 mouse_genomes_project 2 151148839 151153064 - Gm14161 antisense antisense MGP_BALBcJ_T0052609.1 MGP_BALBcJ_G0025331.1 mouse_genomes_project 2 10728389 10871098 - MGP_BALBcJ_P0052609 St8sia6 protein_coding protein_coding MGP_BALBcJ_T0052610.1 MGP_BALBcJ_G0025331.1 mouse_genomes_project 2 10734522 10870327 - St8sia6 protein_coding processed_transcript MGP_BALBcJ_T0054444.1 MGP_BALBcJ_G0025641.1 mouse_genomes_project 2 33769481 33770423 - MGP_BALBcJ_P0054444 Olfr341 protein_coding protein_coding MGP_BALBcJ_T0055127.1 MGP_BALBcJ_G0025779.1 mouse_genomes_project 2 67326130 67336355 + MGP_BALBcJ_P0055127 Ssb protein_coding protein_coding MGP_BALBcJ_T0055128.1 MGP_BALBcJ_G0025779.1 mouse_genomes_project 2 67326130 67336415 + MGP_BALBcJ_P0055128 Ssb protein_coding protein_coding MGP_BALBcJ_T0055129.1 MGP_BALBcJ_G0025779.1 mouse_genomes_project 2 67326191 67336079 + MGP_BALBcJ_P0055129 Ssb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055130.1 MGP_BALBcJ_G0025779.1 mouse_genomes_project 2 67326254 67332118 + MGP_BALBcJ_P0055130 Ssb protein_coding protein_coding MGP_BALBcJ_T0055131.1 MGP_BALBcJ_G0025779.1 mouse_genomes_project 2 67327857 67333716 + Ssb protein_coding processed_transcript MGP_BALBcJ_T0055132.1 MGP_BALBcJ_G0025779.1 mouse_genomes_project 2 67333344 67336079 + MGP_BALBcJ_P0055132 Ssb protein_coding protein_coding MGP_BALBcJ_T0057620.1 MGP_BALBcJ_G0026475.1 mouse_genomes_project 2 128691987 128764875 + MGP_BALBcJ_P0057620 Ebf4 protein_coding protein_coding MGP_BALBcJ_T0057621.1 MGP_BALBcJ_G0026475.1 mouse_genomes_project 2 128692760 128764875 + Ebf4 protein_coding retained_intron MGP_BALBcJ_T0057622.1 MGP_BALBcJ_G0026475.1 mouse_genomes_project 2 128692760 128764875 + MGP_BALBcJ_P0057622 Ebf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057623.1 MGP_BALBcJ_G0026475.1 mouse_genomes_project 2 128692760 128764875 + MGP_BALBcJ_P0057623 Ebf4 protein_coding protein_coding MGP_BALBcJ_T0057624.1 MGP_BALBcJ_G0026475.1 mouse_genomes_project 2 128692760 128764875 + MGP_BALBcJ_P0057624 Ebf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057625.1 MGP_BALBcJ_G0026475.1 mouse_genomes_project 2 128692760 128764875 + MGP_BALBcJ_P0057625 Ebf4 protein_coding protein_coding MGP_BALBcJ_T0055023.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63729160 63774427 - MGP_BALBcJ_P0055023 Scn1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055024.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63729163 63866961 - MGP_BALBcJ_P0055024 Scn1a protein_coding protein_coding MGP_BALBcJ_T0055025.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63729164 63892406 - MGP_BALBcJ_P0055025 Scn1a protein_coding protein_coding MGP_BALBcJ_T0055026.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63729166 63811664 - MGP_BALBcJ_P0055026 Scn1a protein_coding protein_coding MGP_BALBcJ_T0055027.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63731267 63811646 - MGP_BALBcJ_P0055027 Scn1a protein_coding protein_coding MGP_BALBcJ_T0055028.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63731274 63774620 - MGP_BALBcJ_P0055028 Scn1a protein_coding protein_coding MGP_BALBcJ_T0055029.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63782537 63892409 - MGP_BALBcJ_P0055029 Scn1a protein_coding protein_coding MGP_BALBcJ_T0055030.1 MGP_BALBcJ_G0025755.1 mouse_genomes_project 2 63808833 63892383 - Scn1a protein_coding retained_intron MGP_BALBcJ_T0055078.1 MGP_BALBcJ_G0025768.1 mouse_genomes_project 2 66665355 66680913 + G6pc2 protein_coding processed_transcript MGP_BALBcJ_T0055079.1 MGP_BALBcJ_G0025768.1 mouse_genomes_project 2 66674199 66682070 + MGP_BALBcJ_P0055079 G6pc2 protein_coding protein_coding MGP_BALBcJ_T0055080.1 MGP_BALBcJ_G0025768.1 mouse_genomes_project 2 66674226 66682070 + MGP_BALBcJ_P0055080 G6pc2 protein_coding protein_coding MGP_BALBcJ_T0055081.1 MGP_BALBcJ_G0025768.1 mouse_genomes_project 2 66674256 66681065 + G6pc2 protein_coding processed_transcript MGP_BALBcJ_T0058120.1 MGP_BALBcJ_G0026592.1 mouse_genomes_project 2 147343393 147350244 + MGP_BALBcJ_P0058120 Cst8 protein_coding protein_coding MGP_BALBcJ_T0058121.1 MGP_BALBcJ_G0026592.1 mouse_genomes_project 2 147343442 147350244 + MGP_BALBcJ_P0058121 Cst8 protein_coding protein_coding MGP_BALBcJ_T0058122.1 MGP_BALBcJ_G0026592.1 mouse_genomes_project 2 147343511 147350244 + Cst8 protein_coding processed_transcript MGP_BALBcJ_T0100948.1 MGP_BALBcJ_G0038984.1 mouse_genomes_project 2 51146629 51146738 - Gm23315 snoRNA snoRNA MGP_BALBcJ_T0055290.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70913174 70958134 - MGP_BALBcJ_P0055290 Gpr155 protein_coding protein_coding MGP_BALBcJ_T0055291.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70913626 70957974 - MGP_BALBcJ_P0055291 Gpr155 protein_coding protein_coding MGP_BALBcJ_T0055292.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70914658 70958005 - MGP_BALBcJ_P0055292 Gpr155 protein_coding protein_coding MGP_BALBcJ_T0055293.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70919315 70934081 - MGP_BALBcJ_P0055293 Gpr155 protein_coding protein_coding MGP_BALBcJ_T0055294.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70922560 70957960 - Gpr155 protein_coding processed_transcript MGP_BALBcJ_T0055295.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70922560 70957960 - Gpr155 protein_coding retained_intron MGP_BALBcJ_T0055296.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70933989 70941699 - Gpr155 protein_coding processed_transcript MGP_BALBcJ_T0055297.1 MGP_BALBcJ_G0025809.1 mouse_genomes_project 2 70952967 70957973 - Gpr155 protein_coding retained_intron MGP_BALBcJ_T0010379.1 MGP_BALBcJ_G0008504.1 mouse_genomes_project 2 27952879 27952963 + Mir3089 miRNA miRNA MGP_BALBcJ_T0052586.1 MGP_BALBcJ_G0025326.1 mouse_genomes_project 2 10069823 10078170 - MGP_BALBcJ_P0052586 C1ql3 protein_coding protein_coding MGP_BALBcJ_T0058230.1 MGP_BALBcJ_G0026621.1 mouse_genomes_project 2 150436283 150468144 + MGP_BALBcJ_P0058230 Rspo4 protein_coding protein_coding MGP_BALBcJ_T0052622.1 MGP_BALBcJ_G0025334.1 mouse_genomes_project 2 11239501 11296780 + MGP_BALBcJ_P0052622 Tmem236 protein_coding protein_coding MGP_BALBcJ_T0055150.1 MGP_BALBcJ_G0025783.1 mouse_genomes_project 2 67966685 67969453 + MGP_BALBcJ_P0055150 Sp5 protein_coding protein_coding MGP_BALBcJ_T0058155.1 MGP_BALBcJ_G0026606.1 mouse_genomes_project 2 149311895 149320554 - MGP_BALBcJ_P0058155 Vsx1 protein_coding protein_coding MGP_BALBcJ_T0013574.1 MGP_BALBcJ_G0011671.1 mouse_genomes_project 2 70119387 70119729 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003949.1 MGP_BALBcJ_G0003525.1 mouse_genomes_project 2 35635519 35639920 - Gm13584 antisense antisense MGP_BALBcJ_T0059610.1 MGP_BALBcJ_G0026954.1 mouse_genomes_project 2 177727385 177778668 + MGP_BALBcJ_P0059610 Cdh26 protein_coding protein_coding MGP_BALBcJ_T0059611.1 MGP_BALBcJ_G0026954.1 mouse_genomes_project 2 177727461 177778670 + MGP_BALBcJ_P0059611 Cdh26 protein_coding protein_coding MGP_BALBcJ_T0059612.1 MGP_BALBcJ_G0026954.1 mouse_genomes_project 2 177751584 177757876 + Cdh26 protein_coding retained_intron MGP_BALBcJ_T0059073.1 MGP_BALBcJ_G0026820.1 mouse_genomes_project 2 163155844 163157758 + MGP_BALBcJ_P0059073 Svs3a protein_coding protein_coding MGP_BALBcJ_T0001082.1 MGP_BALBcJ_G0001010.1 mouse_genomes_project 2 68015743 68016464 - TEC TEC MGP_BALBcJ_T0059774.1 MGP_BALBcJ_G0026986.1 mouse_genomes_project 2 180464418 180473806 - MGP_BALBcJ_P0059774 Eef1a2 protein_coding protein_coding MGP_BALBcJ_T0013430.1 MGP_BALBcJ_G0011527.1 mouse_genomes_project 2 16743386 16743491 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055207.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68765878 68862953 - MGP_BALBcJ_P0055207 Slc25a12 protein_coding protein_coding MGP_BALBcJ_T0055208.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68769505 68862737 - MGP_BALBcJ_P0055208 Slc25a12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055209.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68769892 68789699 - Slc25a12 protein_coding processed_transcript MGP_BALBcJ_T0055210.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68774386 68777615 - Slc25a12 protein_coding retained_intron MGP_BALBcJ_T0055211.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68807511 68824087 - Slc25a12 protein_coding processed_transcript MGP_BALBcJ_T0055212.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68824986 68839268 - Slc25a12 protein_coding processed_transcript MGP_BALBcJ_T0055213.1 MGP_BALBcJ_G0025793.1 mouse_genomes_project 2 68839125 68843064 - Slc25a12 protein_coding processed_transcript MGP_BALBcJ_T0003918.1 MGP_BALBcJ_G0003499.1 mouse_genomes_project 2 24333579 24380136 + Sardhos antisense antisense MGP_BALBcJ_T0017781.1 MGP_BALBcJ_G0015388.1 mouse_genomes_project 2 101729894 101735784 - 4930547E08Rik processed_transcript processed_transcript MGP_BALBcJ_T0004151.1 MGP_BALBcJ_G0003669.1 mouse_genomes_project 2 165893829 165894599 + Gm17096 antisense antisense MGP_BALBcJ_T0054238.1 MGP_BALBcJ_G0025605.1 mouse_genomes_project 2 30414521 30622412 - MGP_BALBcJ_P0054238 Ralgps1 protein_coding protein_coding MGP_BALBcJ_T0054239.1 MGP_BALBcJ_G0025605.1 mouse_genomes_project 2 30414525 30622412 - MGP_BALBcJ_P0054239 Ralgps1 protein_coding protein_coding MGP_BALBcJ_T0054240.1 MGP_BALBcJ_G0025605.1 mouse_genomes_project 2 30414525 30622412 - MGP_BALBcJ_P0054240 Ralgps1 protein_coding protein_coding MGP_BALBcJ_T0054241.1 MGP_BALBcJ_G0025605.1 mouse_genomes_project 2 30418077 30622412 - MGP_BALBcJ_P0054241 Ralgps1 protein_coding protein_coding MGP_BALBcJ_T0054242.1 MGP_BALBcJ_G0025605.1 mouse_genomes_project 2 30424411 30439225 - Ralgps1 protein_coding processed_transcript MGP_BALBcJ_T0054247.1 MGP_BALBcJ_G0025605.1 mouse_genomes_project 2 30540400 30622412 - Ralgps1 protein_coding retained_intron MGP_BALBcJ_T0059075.1 MGP_BALBcJ_G0026822.1 mouse_genomes_project 2 163220883 163223236 + MGP_BALBcJ_P0059075 Svs5 protein_coding protein_coding MGP_BALBcJ_T0059076.1 MGP_BALBcJ_G0026822.1 mouse_genomes_project 2 163222289 163223236 + MGP_BALBcJ_P0059076 Svs5 protein_coding protein_coding MGP_BALBcJ_T0055358.1 MGP_BALBcJ_G0025825.1 mouse_genomes_project 2 72295137 72316482 + MGP_BALBcJ_P0055358 Gm28230 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098571.1 MGP_BALBcJ_G0036625.1 mouse_genomes_project 2 82218866 82218979 - n-R5s200 rRNA rRNA MGP_BALBcJ_T0001039.1 MGP_BALBcJ_G0000967.1 mouse_genomes_project 2 11214827 11218301 + TEC TEC MGP_BALBcJ_T0056836.1 MGP_BALBcJ_G0026307.1 mouse_genomes_project 2 117206026 117210342 + MGP_BALBcJ_P0056836 Gchfr protein_coding protein_coding MGP_BALBcJ_T0057518.1 MGP_BALBcJ_G0026448.1 mouse_genomes_project 2 126728254 126729524 + MGP_BALBcJ_P0057518 Gm29010 protein_coding protein_coding MGP_BALBcJ_T0057360.1 MGP_BALBcJ_G0026411.1 mouse_genomes_project 2 124223270 124387274 - MGP_BALBcJ_P0057360 Fam227b protein_coding protein_coding MGP_BALBcJ_T0057361.1 MGP_BALBcJ_G0026411.1 mouse_genomes_project 2 124223270 124242554 - MGP_BALBcJ_P0057361 Fam227b protein_coding unknown_likely_coding MGP_BALBcJ_T0057362.1 MGP_BALBcJ_G0026411.1 mouse_genomes_project 2 124223417 124387254 - MGP_BALBcJ_P0057362 Fam227b protein_coding protein_coding MGP_BALBcJ_T0057363.1 MGP_BALBcJ_G0026411.1 mouse_genomes_project 2 124223417 124381156 - MGP_BALBcJ_P0057363 Fam227b protein_coding protein_coding MGP_BALBcJ_T0057364.1 MGP_BALBcJ_G0026411.1 mouse_genomes_project 2 124237252 124387274 - Fam227b protein_coding retained_intron MGP_BALBcJ_T0054453.1 MGP_BALBcJ_G0025649.1 mouse_genomes_project 2 34093560 34094502 - MGP_BALBcJ_P0054453 Olfr3 protein_coding protein_coding MGP_BALBcJ_T0003922.1 MGP_BALBcJ_G0003502.1 mouse_genomes_project 2 26546745 26593788 - Gm13402 antisense antisense MGP_BALBcJ_T0056193.1 MGP_BALBcJ_G0026135.1 mouse_genomes_project 2 90192674 90199215 + Pex16 protein_coding processed_transcript MGP_BALBcJ_T0056194.1 MGP_BALBcJ_G0026135.1 mouse_genomes_project 2 90193304 90199216 + MGP_BALBcJ_P0056194 Pex16 protein_coding protein_coding MGP_BALBcJ_T0056195.1 MGP_BALBcJ_G0026135.1 mouse_genomes_project 2 90193491 90197320 + Pex16 protein_coding processed_transcript MGP_BALBcJ_T0056196.1 MGP_BALBcJ_G0026135.1 mouse_genomes_project 2 90193557 90194702 + Pex16 protein_coding processed_transcript MGP_BALBcJ_T0003944.1 MGP_BALBcJ_G0003520.1 mouse_genomes_project 2 31575296 31591858 + C79798 antisense antisense MGP_BALBcJ_T0003998.1 MGP_BALBcJ_G0003560.1 mouse_genomes_project 2 71159098 71163470 + Chrna1os antisense antisense MGP_BALBcJ_T0003999.1 MGP_BALBcJ_G0003560.1 mouse_genomes_project 2 71159108 71163491 + Chrna1os antisense antisense MGP_BALBcJ_T0055676.1 MGP_BALBcJ_G0025893.1 mouse_genomes_project 2 82642814 82646516 + MGP_BALBcJ_P0055676 Aplnr protein_coding protein_coding MGP_BALBcJ_T0055677.1 MGP_BALBcJ_G0025893.1 mouse_genomes_project 2 82643982 82646514 + MGP_BALBcJ_P0055677 Aplnr protein_coding protein_coding MGP_BALBcJ_T0013516.1 MGP_BALBcJ_G0011613.1 mouse_genomes_project 2 49242087 49242752 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053196.1 MGP_BALBcJ_G0025437.1 mouse_genomes_project 2 22786196 22791019 + MGP_BALBcJ_P0053196 Lcn6 protein_coding protein_coding MGP_BALBcJ_T0053197.1 MGP_BALBcJ_G0025437.1 mouse_genomes_project 2 22788676 22791016 + MGP_BALBcJ_P0053197 Lcn6 protein_coding protein_coding MGP_BALBcJ_T0053198.1 MGP_BALBcJ_G0025437.1 mouse_genomes_project 2 22789371 22791012 + MGP_BALBcJ_P0053198 Lcn6 protein_coding protein_coding MGP_BALBcJ_T0053199.1 MGP_BALBcJ_G0025437.1 mouse_genomes_project 2 22789523 22791012 + Lcn6 protein_coding processed_transcript MGP_BALBcJ_T0007149.1 MGP_BALBcJ_G0005860.1 mouse_genomes_project 2 27859849 27920362 + 9330198N18Rik lincRNA lincRNA MGP_BALBcJ_T0057662.1 MGP_BALBcJ_G0026489.1 mouse_genomes_project 2 129048986 129049729 - Ddrgk1 protein_coding retained_intron MGP_BALBcJ_T0057663.1 MGP_BALBcJ_G0026489.1 mouse_genomes_project 2 129049107 129059785 - MGP_BALBcJ_P0057663 Ddrgk1 protein_coding protein_coding MGP_BALBcJ_T0057664.1 MGP_BALBcJ_G0026489.1 mouse_genomes_project 2 129049146 129052292 - Ddrgk1 protein_coding processed_transcript MGP_BALBcJ_T0057665.1 MGP_BALBcJ_G0026489.1 mouse_genomes_project 2 129049242 129056916 - MGP_BALBcJ_P0057665 Ddrgk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057666.1 MGP_BALBcJ_G0026489.1 mouse_genomes_project 2 129050150 129058992 - Ddrgk1 protein_coding processed_transcript MGP_BALBcJ_T0010374.1 MGP_BALBcJ_G0008499.1 mouse_genomes_project 2 26673152 26673232 - Mir133c miRNA miRNA MGP_BALBcJ_T0007116.1 MGP_BALBcJ_G0005835.1 mouse_genomes_project 2 6590069 6597138 - Gm13218 lincRNA lincRNA MGP_BALBcJ_T0010477.1 MGP_BALBcJ_G0008602.1 mouse_genomes_project 2 180919646 180919715 - Mir7006 miRNA miRNA MGP_BALBcJ_T0054384.1 MGP_BALBcJ_G0025626.1 mouse_genomes_project 2 32618066 32641057 - MGP_BALBcJ_P0054384 Stom protein_coding protein_coding MGP_BALBcJ_T0054385.1 MGP_BALBcJ_G0025626.1 mouse_genomes_project 2 32619421 32624586 - Stom protein_coding retained_intron MGP_BALBcJ_T0055449.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75008214 75319114 - MGP_BALBcJ_P0055449 Zfp385b protein_coding protein_coding MGP_BALBcJ_T0055450.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75008214 75116493 - MGP_BALBcJ_P0055450 Zfp385b protein_coding protein_coding MGP_BALBcJ_T0055451.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75008214 75302044 - MGP_BALBcJ_P0055451 Zfp385b protein_coding protein_coding MGP_BALBcJ_T0055452.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75008680 75418206 - MGP_BALBcJ_P0055452 Zfp385b protein_coding protein_coding MGP_BALBcJ_T0055453.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75013494 75116489 - Zfp385b protein_coding processed_transcript MGP_BALBcJ_T0055454.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75047776 75302044 - Zfp385b protein_coding processed_transcript MGP_BALBcJ_T0055455.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75068690 75116410 - Zfp385b protein_coding processed_transcript MGP_BALBcJ_T0055456.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75098526 75302151 - Zfp385b protein_coding processed_transcript MGP_BALBcJ_T0055457.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75124423 75418649 - MGP_BALBcJ_P0055457 Zfp385b protein_coding protein_coding MGP_BALBcJ_T0055458.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75125174 75160072 - Zfp385b protein_coding processed_transcript MGP_BALBcJ_T0055459.1 MGP_BALBcJ_G0025845.1 mouse_genomes_project 2 75418626 75421025 - Zfp385b protein_coding processed_transcript MGP_BALBcJ_T0057183.1 MGP_BALBcJ_G0026366.1 mouse_genomes_project 2 119486835 119492095 - MGP_BALBcJ_P0057183 Ell3 protein_coding protein_coding MGP_BALBcJ_T0057184.1 MGP_BALBcJ_G0026366.1 mouse_genomes_project 2 119486852 119490428 - MGP_BALBcJ_P0057184 Ell3 protein_coding protein_coding MGP_BALBcJ_T0057186.1 MGP_BALBcJ_G0026366.1 mouse_genomes_project 2 119487805 119488978 - Ell3 protein_coding retained_intron MGP_BALBcJ_T0055909.1 MGP_BALBcJ_G0026091.1 mouse_genomes_project 2 87823711 87824477 + MGP_BALBcJ_P0055909 Olfr1265 protein_coding protein_coding MGP_BALBcJ_T0013741.1 MGP_BALBcJ_G0011838.1 mouse_genomes_project 2 130290863 130292157 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053404.1 MGP_BALBcJ_G0025475.1 mouse_genomes_project 2 24065662 24079792 - MGP_BALBcJ_P0053404 Surf4 protein_coding protein_coding MGP_BALBcJ_T0053405.1 MGP_BALBcJ_G0025475.1 mouse_genomes_project 2 24067584 24079247 - MGP_BALBcJ_P0053405 Surf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053406.1 MGP_BALBcJ_G0025475.1 mouse_genomes_project 2 24070710 24079645 - MGP_BALBcJ_P0053406 Surf4 protein_coding protein_coding MGP_BALBcJ_T0058911.1 MGP_BALBcJ_G0026775.1 mouse_genomes_project 2 157597582 157616127 + MGP_BALBcJ_P0058911 Fam83d protein_coding protein_coding MGP_BALBcJ_T0058912.1 MGP_BALBcJ_G0026775.1 mouse_genomes_project 2 157610897 157616127 + Fam83d protein_coding retained_intron MGP_BALBcJ_T0013811.1 MGP_BALBcJ_G0011908.1 mouse_genomes_project 2 154300705 154301167 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057351.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124101939 124103118 + Galk2 protein_coding processed_transcript MGP_BALBcJ_T0057352.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124101964 124224089 + MGP_BALBcJ_P0057352 Galk2 protein_coding protein_coding MGP_BALBcJ_T0057353.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124101978 124134305 + MGP_BALBcJ_P0057353 Galk2 protein_coding protein_coding MGP_BALBcJ_T0057354.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124108884 124223377 + MGP_BALBcJ_P0057354 Galk2 protein_coding protein_coding MGP_BALBcJ_T0057355.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124108884 124170639 + MGP_BALBcJ_P0057355 Galk2 protein_coding protein_coding MGP_BALBcJ_T0057356.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124109020 124152579 + Galk2 protein_coding processed_transcript MGP_BALBcJ_T0057357.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124109027 124137524 + MGP_BALBcJ_P0057357 Galk2 protein_coding protein_coding MGP_BALBcJ_T0057358.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124109031 124170695 + MGP_BALBcJ_P0057358 Galk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057359.1 MGP_BALBcJ_G0026410.1 mouse_genomes_project 2 124109045 124188412 + Galk2 protein_coding retained_intron MGP_BALBcJ_T0059477.1 MGP_BALBcJ_G0026911.1 mouse_genomes_project 2 169535770 169550582 - MGP_BALBcJ_P0059477 Cyp24a1 protein_coding protein_coding MGP_BALBcJ_T0058057.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459008 144489140 + MGP_BALBcJ_P0058057 protein_coding protein_coding MGP_BALBcJ_T0058058.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459008 144560828 + MGP_BALBcJ_P0058058 protein_coding protein_coding MGP_BALBcJ_T0058059.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459029 144491122 + MGP_BALBcJ_P0058059 protein_coding protein_coding MGP_BALBcJ_T0058060.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459029 144488368 + MGP_BALBcJ_P0058060 protein_coding protein_coding MGP_BALBcJ_T0058061.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459032 144488223 + MGP_BALBcJ_P0058061 protein_coding protein_coding MGP_BALBcJ_T0058062.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459038 144723309 + MGP_BALBcJ_P0058062 protein_coding protein_coding MGP_BALBcJ_T0058063.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144459040 144478124 + MGP_BALBcJ_P0058063 protein_coding protein_coding MGP_BALBcJ_T0058064.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144559253 144612648 + protein_coding processed_transcript MGP_BALBcJ_T0058065.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144563071 144645699 + protein_coding retained_intron MGP_BALBcJ_T0058066.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144563203 144645830 + MGP_BALBcJ_P0058066 protein_coding protein_coding MGP_BALBcJ_T0058067.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144565006 144723305 + protein_coding processed_transcript MGP_BALBcJ_T0058068.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144667837 144723228 + protein_coding processed_transcript MGP_BALBcJ_T0058069.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144722532 144723305 + protein_coding processed_transcript MGP_BALBcJ_T0058070.1 MGP_BALBcJ_G0026573.1 mouse_genomes_project 2 144722880 144723063 + MGP_BALBcJ_P0058070 protein_coding protein_coding MGP_BALBcJ_T0056868.1 MGP_BALBcJ_G0026318.1 mouse_genomes_project 2 117557208 117591572 - MGP_BALBcJ_P0056868 Exd1 protein_coding protein_coding MGP_BALBcJ_T0056869.1 MGP_BALBcJ_G0026318.1 mouse_genomes_project 2 117557214 117585665 - MGP_BALBcJ_P0056869 Exd1 protein_coding protein_coding MGP_BALBcJ_T0056870.1 MGP_BALBcJ_G0026318.1 mouse_genomes_project 2 117582996 117591139 - MGP_BALBcJ_P0056870 Exd1 protein_coding protein_coding MGP_BALBcJ_T0058874.1 MGP_BALBcJ_G0026767.1 mouse_genomes_project 2 157125809 157140459 + Lbp protein_coding processed_transcript MGP_BALBcJ_T0058875.1 MGP_BALBcJ_G0026767.1 mouse_genomes_project 2 157125809 157129829 + MGP_BALBcJ_P0058875 Lbp protein_coding protein_coding MGP_BALBcJ_T0058876.1 MGP_BALBcJ_G0026767.1 mouse_genomes_project 2 157125809 157152343 + MGP_BALBcJ_P0058876 Lbp protein_coding protein_coding MGP_BALBcJ_T0058877.1 MGP_BALBcJ_G0026767.1 mouse_genomes_project 2 157125928 157138122 + Lbp protein_coding retained_intron MGP_BALBcJ_T0058878.1 MGP_BALBcJ_G0026767.1 mouse_genomes_project 2 157133692 157144140 + MGP_BALBcJ_P0058878 Lbp protein_coding protein_coding MGP_BALBcJ_T0053827.1 MGP_BALBcJ_G0025545.1 mouse_genomes_project 2 27822218 27836865 + MGP_BALBcJ_P0053827 Cstad protein_coding protein_coding MGP_BALBcJ_T0053828.1 MGP_BALBcJ_G0025545.1 mouse_genomes_project 2 27832746 27836139 + Cstad protein_coding processed_transcript MGP_BALBcJ_T0054218.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30251875 30260942 - Slc2a8 protein_coding retained_intron MGP_BALBcJ_T0054219.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30251875 30260956 - MGP_BALBcJ_P0054219 Slc2a8 protein_coding protein_coding MGP_BALBcJ_T0054220.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30252470 30260891 - MGP_BALBcJ_P0054220 Slc2a8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054221.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30252470 30260891 - MGP_BALBcJ_P0054221 Slc2a8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054222.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30252470 30260891 - MGP_BALBcJ_P0054222 Slc2a8 protein_coding protein_coding MGP_BALBcJ_T0054223.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30254812 30260945 - MGP_BALBcJ_P0054223 Slc2a8 protein_coding protein_coding MGP_BALBcJ_T0054224.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30255796 30260893 - Slc2a8 protein_coding retained_intron MGP_BALBcJ_T0054225.1 MGP_BALBcJ_G0025603.1 mouse_genomes_project 2 30260359 30260957 - Slc2a8 protein_coding processed_transcript MGP_BALBcJ_T0101011.1 MGP_BALBcJ_G0039047.1 mouse_genomes_project 2 166018429 166018519 + Snord12 snoRNA snoRNA MGP_BALBcJ_T0007365.1 MGP_BALBcJ_G0006037.1 mouse_genomes_project 2 165122149 165123219 - Gm11466 lincRNA lincRNA MGP_BALBcJ_T0100967.1 MGP_BALBcJ_G0039003.1 mouse_genomes_project 2 102165524 102165651 - Gm22501 snoRNA snoRNA MGP_BALBcJ_T0004009.1 MGP_BALBcJ_G0003566.1 mouse_genomes_project 2 72713926 72894155 + 2600014E21Rik antisense antisense MGP_BALBcJ_T0058275.1 MGP_BALBcJ_G0026641.1 mouse_genomes_project 2 151137839 151139224 - MGP_BALBcJ_P0058275 Defb29 protein_coding protein_coding MGP_BALBcJ_T0057558.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471199 127479618 + MGP_BALBcJ_P0057558 Slc20a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0057559.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471215 127484495 + MGP_BALBcJ_P0057559 Slc20a1 protein_coding protein_coding MGP_BALBcJ_T0057560.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471252 127474051 + Slc20a1 protein_coding retained_intron MGP_BALBcJ_T0057561.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471254 127477978 + Slc20a1 protein_coding processed_transcript MGP_BALBcJ_T0057562.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471254 127474049 + Slc20a1 protein_coding retained_intron MGP_BALBcJ_T0057563.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471595 127472688 + MGP_BALBcJ_P0057563 Slc20a1 protein_coding protein_coding MGP_BALBcJ_T0057564.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127471761 127484488 + MGP_BALBcJ_P0057564 Slc20a1 protein_coding protein_coding MGP_BALBcJ_T0057565.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127479198 127481137 + Slc20a1 protein_coding retained_intron MGP_BALBcJ_T0057566.1 MGP_BALBcJ_G0026461.1 mouse_genomes_project 2 127480238 127480905 + Slc20a1 protein_coding retained_intron MGP_BALBcJ_T0052365.1 MGP_BALBcJ_G0025295.1 mouse_genomes_project 2 2266861 2686515 - MGP_BALBcJ_P0052365 Camk1d protein_coding protein_coding MGP_BALBcJ_T0052366.1 MGP_BALBcJ_G0025295.1 mouse_genomes_project 2 2272298 2655131 - MGP_BALBcJ_P0052366 Camk1d protein_coding protein_coding MGP_BALBcJ_T0052367.1 MGP_BALBcJ_G0025295.1 mouse_genomes_project 2 2429720 2655485 - Camk1d protein_coding processed_transcript MGP_BALBcJ_T0052368.1 MGP_BALBcJ_G0025295.1 mouse_genomes_project 2 2543626 2686503 - Camk1d protein_coding processed_transcript MGP_BALBcJ_T0017803.1 MGP_BALBcJ_G0015396.1 mouse_genomes_project 2 112623711 112672806 + Gm13972 processed_transcript processed_transcript MGP_BALBcJ_T0001072.1 MGP_BALBcJ_G0001000.1 mouse_genomes_project 2 36717282 36718332 - TEC TEC MGP_BALBcJ_T0007370.1 MGP_BALBcJ_G0006041.1 mouse_genomes_project 2 165449175 165452666 - Gm14267 lincRNA lincRNA MGP_BALBcJ_T0052467.1 MGP_BALBcJ_G0025313.1 mouse_genomes_project 2 7176141 7278042 + MGP_BALBcJ_P0052467 Itih5 protein_coding protein_coding MGP_BALBcJ_T0013675.1 MGP_BALBcJ_G0011772.1 mouse_genomes_project 2 102979574 102980370 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058011.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143051980 143066689 + MGP_BALBcJ_P0058011 Polr3f protein_coding protein_coding MGP_BALBcJ_T0058012.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143052004 143054958 + Polr3f protein_coding processed_transcript MGP_BALBcJ_T0058013.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143052010 143059867 + MGP_BALBcJ_P0058013 Polr3f protein_coding protein_coding MGP_BALBcJ_T0058014.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143052042 143059384 + Polr3f protein_coding processed_transcript MGP_BALBcJ_T0058015.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143057062 143063488 + Polr3f protein_coding processed_transcript MGP_BALBcJ_T0058016.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143060634 143061322 + Polr3f protein_coding processed_transcript MGP_BALBcJ_T0058017.1 MGP_BALBcJ_G0026563.1 mouse_genomes_project 2 143060869 143063588 + Polr3f protein_coding processed_transcript MGP_BALBcJ_T0013645.1 MGP_BALBcJ_G0011742.1 mouse_genomes_project 2 91636822 91637333 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055684.1 MGP_BALBcJ_G0025899.1 mouse_genomes_project 2 82942108 82943053 - MGP_BALBcJ_P0055684 Olfr994 protein_coding protein_coding MGP_BALBcJ_T0011489.1 MGP_BALBcJ_G0009614.1 mouse_genomes_project 2 112246582 112246900 + Gm25103 misc_RNA misc_RNA MGP_BALBcJ_T0013670.1 MGP_BALBcJ_G0011767.1 mouse_genomes_project 2 101814495 101814756 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059257.1 MGP_BALBcJ_G0026870.1 mouse_genomes_project 2 164320347 164388717 - MGP_BALBcJ_P0059257 Slc13a3 protein_coding protein_coding MGP_BALBcJ_T0059258.1 MGP_BALBcJ_G0026870.1 mouse_genomes_project 2 164320614 164388717 - MGP_BALBcJ_P0059258 Slc13a3 protein_coding protein_coding MGP_BALBcJ_T0059259.1 MGP_BALBcJ_G0026870.1 mouse_genomes_project 2 164322024 164324379 - Slc13a3 protein_coding retained_intron MGP_BALBcJ_T0059260.1 MGP_BALBcJ_G0026870.1 mouse_genomes_project 2 164327196 164335603 - Slc13a3 protein_coding retained_intron MGP_BALBcJ_T0059261.1 MGP_BALBcJ_G0026870.1 mouse_genomes_project 2 164359357 164388686 - Slc13a3 protein_coding retained_intron MGP_BALBcJ_T0100996.1 MGP_BALBcJ_G0039032.1 mouse_genomes_project 2 149997433 149997569 - snoRNA snoRNA MGP_BALBcJ_T0099676.1 MGP_BALBcJ_G0037712.1 mouse_genomes_project 2 52444676 52444817 + Gm25489 snRNA snRNA MGP_BALBcJ_T0053128.1 MGP_BALBcJ_G0025422.1 mouse_genomes_project 2 22564043 22567797 - MGP_BALBcJ_P0053128 Ptgds protein_coding protein_coding MGP_BALBcJ_T0053129.1 MGP_BALBcJ_G0025422.1 mouse_genomes_project 2 22564043 22567593 - MGP_BALBcJ_P0053129 Ptgds protein_coding protein_coding MGP_BALBcJ_T0053130.1 MGP_BALBcJ_G0025422.1 mouse_genomes_project 2 22564043 22567500 - MGP_BALBcJ_P0053130 Ptgds protein_coding protein_coding MGP_BALBcJ_T0053131.1 MGP_BALBcJ_G0025422.1 mouse_genomes_project 2 22564045 22567134 - Ptgds protein_coding retained_intron MGP_BALBcJ_T0053132.1 MGP_BALBcJ_G0025422.1 mouse_genomes_project 2 22564046 22566908 - Ptgds protein_coding processed_transcript MGP_BALBcJ_T0054648.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46344162 46394209 - MGP_BALBcJ_P0054648 Orc4 protein_coding protein_coding MGP_BALBcJ_T0054649.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46346218 46351161 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054650.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46346654 46394164 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054651.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46346717 46351816 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054652.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46346752 46353723 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054653.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46352551 46394167 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054654.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46358352 46394972 - MGP_BALBcJ_P0054654 Orc4 protein_coding protein_coding MGP_BALBcJ_T0054655.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46374382 46385479 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054656.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46376714 46394167 - MGP_BALBcJ_P0054656 Orc4 protein_coding protein_coding MGP_BALBcJ_T0054657.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46377909 46378959 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054658.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46381590 46394165 - Orc4 protein_coding processed_transcript MGP_BALBcJ_T0054659.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46381886 46394174 - MGP_BALBcJ_P0054659 Orc4 protein_coding protein_coding MGP_BALBcJ_T0054660.1 MGP_BALBcJ_G0025691.1 mouse_genomes_project 2 46381957 46395210 - MGP_BALBcJ_P0054660 Orc4 protein_coding protein_coding MGP_BALBcJ_T0004117.1 MGP_BALBcJ_G0003644.1 mouse_genomes_project 2 154350198 154351898 + Gssos2 antisense antisense MGP_BALBcJ_T0004118.1 MGP_BALBcJ_G0003644.1 mouse_genomes_project 2 154350954 154351884 + Gssos2 antisense antisense MGP_BALBcJ_T0059407.1 MGP_BALBcJ_G0026898.1 mouse_genomes_project 2 167169569 167195439 - MGP_BALBcJ_P0059407 Adnp protein_coding protein_coding MGP_BALBcJ_T0059408.1 MGP_BALBcJ_G0026898.1 mouse_genomes_project 2 167169569 167195629 - MGP_BALBcJ_P0059408 Adnp protein_coding protein_coding MGP_BALBcJ_T0059410.1 MGP_BALBcJ_G0026898.1 mouse_genomes_project 2 167173551 167195226 - Adnp protein_coding processed_transcript MGP_BALBcJ_T0059411.1 MGP_BALBcJ_G0026898.1 mouse_genomes_project 2 167192873 167195226 - Adnp protein_coding retained_intron MGP_BALBcJ_T0052627.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11677771 11679113 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052628.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11678805 12075525 + MGP_BALBcJ_P0052628 Cacnb2 protein_coding protein_coding MGP_BALBcJ_T0052629.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11679621 12050651 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052630.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11816723 12075524 + Cacnb2 protein_coding processed_transcript MGP_BALBcJ_T0052631.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11841746 12051485 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052632.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11905572 12062107 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052633.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11905638 12073849 + MGP_BALBcJ_P0052633 Cacnb2 protein_coding protein_coding MGP_BALBcJ_T0052634.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11959905 12062022 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052635.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11959906 12062107 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052636.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11959919 12073787 + MGP_BALBcJ_P0052636 Cacnb2 protein_coding protein_coding MGP_BALBcJ_T0052637.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11960241 12053614 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052638.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11960671 11983335 + MGP_BALBcJ_P0052638 Cacnb2 protein_coding protein_coding MGP_BALBcJ_T0052639.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11960998 12055366 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052640.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 11961002 12074713 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0052641.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 12050569 12069019 + MGP_BALBcJ_P0052641 Cacnb2 protein_coding protein_coding MGP_BALBcJ_T0052642.1 MGP_BALBcJ_G0025337.1 mouse_genomes_project 2 12069750 12072052 + Cacnb2 protein_coding retained_intron MGP_BALBcJ_T0053721.1 MGP_BALBcJ_G0025530.1 mouse_genomes_project 2 27384259 27386836 + MGP_BALBcJ_P0053721 Endog protein_coding protein_coding MGP_BALBcJ_T0004114.1 MGP_BALBcJ_G0003641.1 mouse_genomes_project 2 152273597 152275194 - Dnmt3bos antisense antisense MGP_BALBcJ_T0053568.1 MGP_BALBcJ_G0025509.1 mouse_genomes_project 2 26241208 26268552 + MGP_BALBcJ_P0053568 Ttf1 protein_coding protein_coding MGP_BALBcJ_T0053569.1 MGP_BALBcJ_G0025509.1 mouse_genomes_project 2 26241212 26268512 + Ttf1 protein_coding retained_intron MGP_BALBcJ_T0053570.1 MGP_BALBcJ_G0025509.1 mouse_genomes_project 2 26255902 26262516 + Ttf1 protein_coding retained_intron MGP_BALBcJ_T0053571.1 MGP_BALBcJ_G0025509.1 mouse_genomes_project 2 26264328 26265612 + Ttf1 protein_coding retained_intron MGP_BALBcJ_T0013681.1 MGP_BALBcJ_G0011778.1 mouse_genomes_project 2 104972880 104973717 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058390.1 MGP_BALBcJ_G0026673.1 mouse_genomes_project 2 152389431 152421961 + MGP_BALBcJ_P0058390 Mapre1 protein_coding protein_coding MGP_BALBcJ_T0058391.1 MGP_BALBcJ_G0026673.1 mouse_genomes_project 2 152389759 152406735 + Mapre1 protein_coding processed_transcript MGP_BALBcJ_T0058392.1 MGP_BALBcJ_G0026673.1 mouse_genomes_project 2 152393550 152404731 + Mapre1 protein_coding processed_transcript MGP_BALBcJ_T0055016.1 MGP_BALBcJ_G0025753.1 mouse_genomes_project 2 63530518 63572718 - MGP_BALBcJ_P0055016 Galnt3 protein_coding protein_coding MGP_BALBcJ_T0055017.1 MGP_BALBcJ_G0025753.1 mouse_genomes_project 2 63531838 63542886 - Galnt3 protein_coding processed_transcript MGP_BALBcJ_T0055018.1 MGP_BALBcJ_G0025753.1 mouse_genomes_project 2 63538823 63541733 - Galnt3 protein_coding processed_transcript MGP_BALBcJ_T0055019.1 MGP_BALBcJ_G0025753.1 mouse_genomes_project 2 63543302 63550115 - Galnt3 protein_coding processed_transcript MGP_BALBcJ_T0011486.1 MGP_BALBcJ_G0009611.1 mouse_genomes_project 2 103069540 103069834 - Gm27538 misc_RNA misc_RNA MGP_BALBcJ_T0013828.1 MGP_BALBcJ_G0011925.1 mouse_genomes_project 2 158618588 158619120 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059669.1 MGP_BALBcJ_G0026966.1 mouse_genomes_project 2 179557908 179577231 - Cables2 protein_coding retained_intron MGP_BALBcJ_T0059670.1 MGP_BALBcJ_G0026966.1 mouse_genomes_project 2 179563793 179577266 - MGP_BALBcJ_P0059670 Cables2 protein_coding protein_coding MGP_BALBcJ_T0059671.1 MGP_BALBcJ_G0026966.1 mouse_genomes_project 2 179564151 179565516 - Cables2 protein_coding retained_intron MGP_BALBcJ_T0059672.1 MGP_BALBcJ_G0026966.1 mouse_genomes_project 2 179565882 179577264 - Cables2 protein_coding retained_intron MGP_BALBcJ_T0059673.1 MGP_BALBcJ_G0026966.1 mouse_genomes_project 2 179566605 179577214 - Cables2 protein_coding retained_intron MGP_BALBcJ_T0057767.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930471 129959243 + MGP_BALBcJ_P0057767 Smox protein_coding protein_coding MGP_BALBcJ_T0057768.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930739 129964183 + MGP_BALBcJ_P0057768 Smox protein_coding protein_coding MGP_BALBcJ_T0057769.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930898 129959282 + MGP_BALBcJ_P0057769 Smox protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057770.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + Smox protein_coding retained_intron MGP_BALBcJ_T0057771.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057771 Smox protein_coding protein_coding MGP_BALBcJ_T0057772.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057772 Smox protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057773.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057773 Smox protein_coding protein_coding MGP_BALBcJ_T0057774.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057774 Smox protein_coding protein_coding MGP_BALBcJ_T0057775.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057775 Smox protein_coding protein_coding MGP_BALBcJ_T0057776.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057776 Smox protein_coding protein_coding MGP_BALBcJ_T0057777.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930918 129964172 + MGP_BALBcJ_P0057777 Smox protein_coding protein_coding MGP_BALBcJ_T0057778.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930939 129964922 + MGP_BALBcJ_P0057778 Smox protein_coding protein_coding MGP_BALBcJ_T0057779.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129930968 129964167 + MGP_BALBcJ_P0057779 Smox protein_coding protein_coding MGP_BALBcJ_T0057780.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129931239 129951104 + MGP_BALBcJ_P0057780 Smox protein_coding protein_coding MGP_BALBcJ_T0057781.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129947878 129951141 + Smox protein_coding processed_transcript MGP_BALBcJ_T0057782.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129959185 129963879 + MGP_BALBcJ_P0057782 Smox protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057783.1 MGP_BALBcJ_G0026507.1 mouse_genomes_project 2 129960898 129964141 + Smox protein_coding retained_intron MGP_BALBcJ_T0052721.1 MGP_BALBcJ_G0025350.1 mouse_genomes_project 2 15770796 15775649 + Spag6 protein_coding processed_transcript MGP_BALBcJ_T0052722.1 MGP_BALBcJ_G0025350.1 mouse_genomes_project 2 15770816 15775802 + Spag6 protein_coding processed_transcript MGP_BALBcJ_T0052723.1 MGP_BALBcJ_G0025350.1 mouse_genomes_project 2 15775787 15827668 + MGP_BALBcJ_P0052723 Spag6 protein_coding protein_coding MGP_BALBcJ_T0052724.1 MGP_BALBcJ_G0025350.1 mouse_genomes_project 2 15775848 15809545 + MGP_BALBcJ_P0052724 Spag6 protein_coding protein_coding MGP_BALBcJ_T0059514.1 MGP_BALBcJ_G0026927.1 mouse_genomes_project 2 172107097 172122715 + MGP_BALBcJ_P0059514 Rae1 protein_coding protein_coding MGP_BALBcJ_T0059515.1 MGP_BALBcJ_G0026927.1 mouse_genomes_project 2 172107104 172116411 + MGP_BALBcJ_P0059515 Rae1 protein_coding protein_coding MGP_BALBcJ_T0059516.1 MGP_BALBcJ_G0026927.1 mouse_genomes_project 2 172113594 172116410 + Rae1 protein_coding retained_intron MGP_BALBcJ_T0059517.1 MGP_BALBcJ_G0026927.1 mouse_genomes_project 2 172118626 172119785 + Rae1 protein_coding retained_intron MGP_BALBcJ_T0059518.1 MGP_BALBcJ_G0026927.1 mouse_genomes_project 2 172119424 172122403 + Rae1 protein_coding retained_intron MGP_BALBcJ_T0059122.1 MGP_BALBcJ_G0026838.1 mouse_genomes_project 2 163529991 163534099 - MGP_BALBcJ_P0059122 Wfdc16 protein_coding protein_coding MGP_BALBcJ_T0010354.1 MGP_BALBcJ_G0008479.1 mouse_genomes_project 2 7522254 7522344 + Gm24806 miRNA miRNA MGP_BALBcJ_T0017707.1 MGP_BALBcJ_G0015340.1 mouse_genomes_project 2 23478578 23497886 + Gm13562 processed_transcript processed_transcript MGP_BALBcJ_T0017708.1 MGP_BALBcJ_G0015340.1 mouse_genomes_project 2 23491430 23495697 + Gm13562 processed_transcript processed_transcript MGP_BALBcJ_T0007236.1 MGP_BALBcJ_G0005932.1 mouse_genomes_project 2 89856729 89910259 - lincRNA lincRNA MGP_BALBcJ_T0013436.1 MGP_BALBcJ_G0011533.1 mouse_genomes_project 2 19716239 19716600 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054684.1 MGP_BALBcJ_G0025695.1 mouse_genomes_project 2 47239676 47404293 + MGP_BALBcJ_P0054684 Lypd6b protein_coding protein_coding MGP_BALBcJ_T0054685.1 MGP_BALBcJ_G0025695.1 mouse_genomes_project 2 47239719 47386430 + Lypd6b protein_coding processed_transcript MGP_BALBcJ_T0054686.1 MGP_BALBcJ_G0025695.1 mouse_genomes_project 2 47293865 47397983 + Lypd6b protein_coding processed_transcript MGP_BALBcJ_T0052263.1 MGP_BALBcJ_G0025276.1 mouse_genomes_project 2 265734 270155 - MGP_BALBcJ_P0052263 Rpp38 protein_coding protein_coding MGP_BALBcJ_T0007291.1 MGP_BALBcJ_G0005975.1 mouse_genomes_project 2 116294177 116300131 - A930104D05Rik lincRNA lincRNA MGP_BALBcJ_T0007292.1 MGP_BALBcJ_G0005975.1 mouse_genomes_project 2 116296967 116299963 - A930104D05Rik lincRNA lincRNA MGP_BALBcJ_T0010314.1 MGP_BALBcJ_G0008439.1 mouse_genomes_project 2 6230096 6230173 - Gm23963 miRNA miRNA MGP_BALBcJ_T0059018.1 MGP_BALBcJ_G0026798.1 mouse_genomes_project 2 162339022 162345273 - MGP_BALBcJ_P0059018 Fitm2 protein_coding protein_coding MGP_BALBcJ_T0058282.1 MGP_BALBcJ_G0026647.1 mouse_genomes_project 2 151224231 151224953 - MGP_BALBcJ_P0058282 Defb25 protein_coding protein_coding MGP_BALBcJ_T0017746.1 MGP_BALBcJ_G0015364.1 mouse_genomes_project 2 67504023 67507517 + Gm13631 processed_transcript processed_transcript MGP_BALBcJ_T0102381.1 MGP_BALBcJ_G0040197.1 mouse_genomes_project 2 19587657 19588329 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058727.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155188210 155273970 + Epb41l1 protein_coding processed_transcript MGP_BALBcJ_T0058728.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155188242 155294442 + MGP_BALBcJ_P0058728 Epb41l1 protein_coding protein_coding MGP_BALBcJ_T0058729.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155242563 155271213 + Epb41l1 protein_coding processed_transcript MGP_BALBcJ_T0058730.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155251710 155315374 + MGP_BALBcJ_P0058730 Epb41l1 protein_coding protein_coding MGP_BALBcJ_T0058731.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155277937 155285930 + Epb41l1 protein_coding processed_transcript MGP_BALBcJ_T0058732.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155305707 155312173 + Epb41l1 protein_coding retained_intron MGP_BALBcJ_T0058733.1 MGP_BALBcJ_G0026739.1 mouse_genomes_project 2 155309550 155312513 + Epb41l1 protein_coding processed_transcript MGP_BALBcJ_T0007344.1 MGP_BALBcJ_G0006018.1 mouse_genomes_project 2 155343843 155349458 + Gm14168 lincRNA lincRNA MGP_BALBcJ_T0004158.1 MGP_BALBcJ_G0003676.1 mouse_genomes_project 2 169631582 169633951 + Gm14637 antisense antisense MGP_BALBcJ_T0058421.1 MGP_BALBcJ_G0026684.1 mouse_genomes_project 2 152839985 152845829 + MGP_BALBcJ_P0058421 Bpifa5 protein_coding protein_coding MGP_BALBcJ_T0053022.1 MGP_BALBcJ_G0025406.1 mouse_genomes_project 2 22352402 22359715 + MGP_BALBcJ_P0053022 Tprn protein_coding protein_coding MGP_BALBcJ_T0053023.1 MGP_BALBcJ_G0025406.1 mouse_genomes_project 2 22354025 22359386 + Tprn protein_coding processed_transcript MGP_BALBcJ_T0053024.1 MGP_BALBcJ_G0025406.1 mouse_genomes_project 2 22357393 22359001 + Tprn protein_coding processed_transcript MGP_BALBcJ_T0053025.1 MGP_BALBcJ_G0025406.1 mouse_genomes_project 2 22358765 22359345 + Tprn protein_coding processed_transcript MGP_BALBcJ_T0057299.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122321828 122375432 + Sema6d protein_coding retained_intron MGP_BALBcJ_T0057300.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122321828 122902702 + MGP_BALBcJ_P0057300 Sema6d protein_coding protein_coding MGP_BALBcJ_T0057301.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122375083 122739457 + Sema6d protein_coding processed_transcript MGP_BALBcJ_T0057302.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122843954 122896981 + Sema6d protein_coding retained_intron MGP_BALBcJ_T0057303.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122844144 122902702 + MGP_BALBcJ_P0057303 Sema6d protein_coding protein_coding MGP_BALBcJ_T0057304.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122844144 122902702 + MGP_BALBcJ_P0057304 Sema6d protein_coding protein_coding MGP_BALBcJ_T0057305.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122844144 122902702 + MGP_BALBcJ_P0057305 Sema6d protein_coding protein_coding MGP_BALBcJ_T0057306.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122844144 122900045 + MGP_BALBcJ_P0057306 Sema6d protein_coding protein_coding MGP_BALBcJ_T0057307.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122844449 122900045 + MGP_BALBcJ_P0057307 Sema6d protein_coding protein_coding MGP_BALBcJ_T0057308.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122887506 122902710 + MGP_BALBcJ_P0057308 Sema6d protein_coding unknown_likely_coding MGP_BALBcJ_T0057309.1 MGP_BALBcJ_G0026396.1 mouse_genomes_project 2 122887725 122899405 + MGP_BALBcJ_P0057309 Sema6d protein_coding protein_coding MGP_BALBcJ_T0056226.1 MGP_BALBcJ_G0026144.1 mouse_genomes_project 2 91035294 91168691 - MGP_BALBcJ_P0056226 Tspan18 protein_coding protein_coding MGP_BALBcJ_T0056227.1 MGP_BALBcJ_G0026144.1 mouse_genomes_project 2 91037695 91061468 - MGP_BALBcJ_P0056227 Tspan18 protein_coding protein_coding MGP_BALBcJ_T0056228.1 MGP_BALBcJ_G0026144.1 mouse_genomes_project 2 91145630 91168709 - Tspan18 protein_coding processed_transcript MGP_BALBcJ_T0056229.1 MGP_BALBcJ_G0026144.1 mouse_genomes_project 2 91145630 91146883 - Tspan18 protein_coding processed_transcript MGP_BALBcJ_T0013607.1 MGP_BALBcJ_G0011704.1 mouse_genomes_project 2 80986360 80986844 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054105.1 MGP_BALBcJ_G0025584.1 mouse_genomes_project 2 29843578 29846300 + MGP_BALBcJ_P0054105 Dpm2 protein_coding protein_coding MGP_BALBcJ_T0054106.1 MGP_BALBcJ_G0025584.1 mouse_genomes_project 2 29843578 29846284 + MGP_BALBcJ_P0054106 Dpm2 protein_coding protein_coding MGP_BALBcJ_T0054107.1 MGP_BALBcJ_G0025584.1 mouse_genomes_project 2 29843587 29845802 + Dpm2 protein_coding retained_intron MGP_BALBcJ_T0054108.1 MGP_BALBcJ_G0025584.1 mouse_genomes_project 2 29844767 29846177 + Dpm2 protein_coding retained_intron MGP_BALBcJ_T0013770.1 MGP_BALBcJ_G0011867.1 mouse_genomes_project 2 142886691 142888477 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059525.1 MGP_BALBcJ_G0026929.1 mouse_genomes_project 2 172202275 172228071 - MGP_BALBcJ_P0059525 Ctcfl protein_coding protein_coding MGP_BALBcJ_T0013747.1 MGP_BALBcJ_G0011844.1 mouse_genomes_project 2 131521025 131521391 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011479.1 MGP_BALBcJ_G0009604.1 mouse_genomes_project 2 47361429 47361539 - Gm25223 misc_RNA misc_RNA MGP_BALBcJ_T0004015.1 MGP_BALBcJ_G0003571.1 mouse_genomes_project 2 82667346 82680701 + Gm13713 antisense antisense MGP_BALBcJ_T0004016.1 MGP_BALBcJ_G0003571.1 mouse_genomes_project 2 82667346 82699925 + Gm13713 antisense antisense MGP_BALBcJ_T0057438.1 MGP_BALBcJ_G0026427.1 mouse_genomes_project 2 125439180 125461301 - MGP_BALBcJ_P0057438 1810024B03Rik protein_coding protein_coding MGP_BALBcJ_T0057439.1 MGP_BALBcJ_G0026427.1 mouse_genomes_project 2 125455588 125461275 - 1810024B03Rik protein_coding processed_transcript MGP_BALBcJ_T0055808.1 MGP_BALBcJ_G0026011.1 mouse_genomes_project 2 85752947 85753913 + MGP_BALBcJ_P0055808 Olfr1161 protein_coding protein_coding MGP_BALBcJ_T0100933.1 MGP_BALBcJ_G0038969.1 mouse_genomes_project 2 24057925 24057996 + Gm24134 snoRNA snoRNA MGP_BALBcJ_T0100961.1 MGP_BALBcJ_G0038997.1 mouse_genomes_project 2 89400015 89400126 + Snord67 snoRNA snoRNA MGP_BALBcJ_T0054506.1 MGP_BALBcJ_G0025671.1 mouse_genomes_project 2 35058715 35081902 + MGP_BALBcJ_P0054506 Crb2 protein_coding protein_coding MGP_BALBcJ_T0054507.1 MGP_BALBcJ_G0025671.1 mouse_genomes_project 2 35073619 35075972 + MGP_BALBcJ_P0054507 Crb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054508.1 MGP_BALBcJ_G0025671.1 mouse_genomes_project 2 35077972 35079415 + Crb2 protein_coding processed_transcript MGP_BALBcJ_T0013609.1 MGP_BALBcJ_G0011706.1 mouse_genomes_project 2 81019322 81019532 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098359.1 MGP_BALBcJ_G0036413.1 mouse_genomes_project 2 26939523 26939854 - pseudogene pseudogene MGP_BALBcJ_T0013830.1 MGP_BALBcJ_G0011927.1 mouse_genomes_project 2 159682276 159683134 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013672.1 MGP_BALBcJ_G0011769.1 mouse_genomes_project 2 102526645 102526832 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003991.1 MGP_BALBcJ_G0003556.1 mouse_genomes_project 2 70540303 70550159 + Sp3os antisense antisense MGP_BALBcJ_T0003992.1 MGP_BALBcJ_G0003556.1 mouse_genomes_project 2 70540303 70550394 + Sp3os antisense antisense MGP_BALBcJ_T0003993.1 MGP_BALBcJ_G0003556.1 mouse_genomes_project 2 70540353 70550263 + Sp3os antisense antisense MGP_BALBcJ_T0003994.1 MGP_BALBcJ_G0003556.1 mouse_genomes_project 2 70548957 70550324 + Sp3os antisense antisense MGP_BALBcJ_T0052682.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15124955 15286699 + MGP_BALBcJ_P0052682 Mllt10 protein_coding protein_coding MGP_BALBcJ_T0052683.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15134137 15192706 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0052684.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15134427 15196581 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0052685.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15134430 15285275 + MGP_BALBcJ_P0052685 Mllt10 protein_coding protein_coding MGP_BALBcJ_T0052686.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15134548 15194170 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0052687.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15134577 15180029 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0052688.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15134584 15134999 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0052689.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15162621 15285117 + MGP_BALBcJ_P0052689 Mllt10 protein_coding protein_coding MGP_BALBcJ_T0052690.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15194066 15229867 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0052691.1 MGP_BALBcJ_G0025346.1 mouse_genomes_project 2 15240523 15257870 + Mllt10 protein_coding processed_transcript MGP_BALBcJ_T0102400.1 MGP_BALBcJ_G0040216.1 mouse_genomes_project 2 83138826 83139756 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100938.1 MGP_BALBcJ_G0038974.1 mouse_genomes_project 2 30107531 30107659 + Gm24165 snoRNA snoRNA MGP_BALBcJ_T0001095.1 MGP_BALBcJ_G0001022.1 mouse_genomes_project 2 154850577 154852250 - TEC TEC MGP_BALBcJ_T0055371.1 MGP_BALBcJ_G0025829.1 mouse_genomes_project 2 73251601 73284251 - MGP_BALBcJ_P0055371 Nfe2l2 protein_coding protein_coding MGP_BALBcJ_T0055372.1 MGP_BALBcJ_G0025829.1 mouse_genomes_project 2 73270669 73284099 - Nfe2l2 protein_coding processed_transcript MGP_BALBcJ_T0053927.1 MGP_BALBcJ_G0025559.1 mouse_genomes_project 2 28716742 28768185 + MGP_BALBcJ_P0053927 protein_coding protein_coding MGP_BALBcJ_T0053928.1 MGP_BALBcJ_G0025559.1 mouse_genomes_project 2 28744872 28757691 + protein_coding retained_intron MGP_BALBcJ_T0053929.1 MGP_BALBcJ_G0025559.1 mouse_genomes_project 2 28747826 28762308 + protein_coding retained_intron MGP_BALBcJ_T0053930.1 MGP_BALBcJ_G0025559.1 mouse_genomes_project 2 28766023 28768044 + protein_coding retained_intron MGP_BALBcJ_T0004106.1 MGP_BALBcJ_G0003634.1 mouse_genomes_project 2 150270890 150277869 - Tmem74bos antisense antisense MGP_BALBcJ_T0004107.1 MGP_BALBcJ_G0003634.1 mouse_genomes_project 2 150272443 150277593 - Tmem74bos antisense antisense MGP_BALBcJ_T0100952.1 MGP_BALBcJ_G0038988.1 mouse_genomes_project 2 58690750 58690882 + Gm26422 snoRNA snoRNA MGP_BALBcJ_T0053001.1 MGP_BALBcJ_G0025401.1 mouse_genomes_project 2 22323573 22325885 - MGP_BALBcJ_P0053001 Rnf224 protein_coding protein_coding MGP_BALBcJ_T0053002.1 MGP_BALBcJ_G0025401.1 mouse_genomes_project 2 22324080 22325787 - MGP_BALBcJ_P0053002 Rnf224 protein_coding protein_coding MGP_BALBcJ_T0013862.1 MGP_BALBcJ_G0011959.1 mouse_genomes_project 2 178659676 178660427 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055651.1 MGP_BALBcJ_G0025888.1 mouse_genomes_project 2 82495782 82498964 + MGP_BALBcJ_P0055651 Prg2 protein_coding protein_coding MGP_BALBcJ_T0013667.1 MGP_BALBcJ_G0011764.1 mouse_genomes_project 2 101747015 101747489 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057632.1 MGP_BALBcJ_G0026479.1 mouse_genomes_project 2 128800995 128801923 + MGP_BALBcJ_P0057632 Tmem239 protein_coding protein_coding MGP_BALBcJ_T0057313.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123322682 123327068 - Myef2 protein_coding processed_transcript MGP_BALBcJ_T0057314.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123324325 123362333 - MGP_BALBcJ_P0057314 Myef2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057315.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123324622 123362364 - MGP_BALBcJ_P0057315 Myef2 protein_coding protein_coding MGP_BALBcJ_T0057316.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123325795 123362361 - MGP_BALBcJ_P0057316 Myef2 protein_coding protein_coding MGP_BALBcJ_T0057317.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123325796 123362399 - MGP_BALBcJ_P0057317 Myef2 protein_coding protein_coding MGP_BALBcJ_T0057318.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123325796 123362398 - MGP_BALBcJ_P0057318 Myef2 protein_coding protein_coding MGP_BALBcJ_T0057319.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123326890 123355612 - MGP_BALBcJ_P0057319 Myef2 protein_coding protein_coding MGP_BALBcJ_T0057320.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123334625 123362152 - MGP_BALBcJ_P0057320 Myef2 protein_coding protein_coding MGP_BALBcJ_T0057321.1 MGP_BALBcJ_G0026398.1 mouse_genomes_project 2 123338552 123362313 - Myef2 protein_coding retained_intron MGP_BALBcJ_T0010319.1 MGP_BALBcJ_G0008444.1 mouse_genomes_project 2 7490647 7490768 + Mir669f miRNA miRNA MGP_BALBcJ_T0098872.1 MGP_BALBcJ_G0036920.1 mouse_genomes_project 2 134133658 134134631 + Gm14209 sense_intronic sense_intronic MGP_BALBcJ_T0057862.1 MGP_BALBcJ_G0026529.1 mouse_genomes_project 2 133067162 133110547 - MGP_BALBcJ_P0057862 Tmx4 protein_coding protein_coding MGP_BALBcJ_T0057863.1 MGP_BALBcJ_G0026529.1 mouse_genomes_project 2 133071980 133110534 - Tmx4 protein_coding processed_transcript MGP_BALBcJ_T0057864.1 MGP_BALBcJ_G0026529.1 mouse_genomes_project 2 133079749 133110443 - MGP_BALBcJ_P0057864 Tmx4 protein_coding protein_coding MGP_BALBcJ_T0057865.1 MGP_BALBcJ_G0026529.1 mouse_genomes_project 2 133105898 133110492 - MGP_BALBcJ_P0057865 Tmx4 protein_coding protein_coding MGP_BALBcJ_T0058507.1 MGP_BALBcJ_G0026706.1 mouse_genomes_project 2 154025233 154027016 + MGP_BALBcJ_P0058507 Map1lc3a protein_coding protein_coding MGP_BALBcJ_T0058508.1 MGP_BALBcJ_G0026706.1 mouse_genomes_project 2 154025479 154027013 + Map1lc3a protein_coding processed_transcript MGP_BALBcJ_T0058509.1 MGP_BALBcJ_G0026706.1 mouse_genomes_project 2 154025825 154027011 + Map1lc3a protein_coding processed_transcript MGP_BALBcJ_T0053623.1 MGP_BALBcJ_G0025518.1 mouse_genomes_project 2 27023418 27047331 + Urm1 protein_coding processed_transcript MGP_BALBcJ_T0053624.1 MGP_BALBcJ_G0025518.1 mouse_genomes_project 2 27031350 27047560 + Urm1 protein_coding processed_transcript MGP_BALBcJ_T0053625.1 MGP_BALBcJ_G0025518.1 mouse_genomes_project 2 27031350 27049188 + MGP_BALBcJ_P0053625 Urm1 protein_coding protein_coding MGP_BALBcJ_T0053626.1 MGP_BALBcJ_G0025518.1 mouse_genomes_project 2 27031369 27047607 + Urm1 protein_coding processed_transcript MGP_BALBcJ_T0053627.1 MGP_BALBcJ_G0025518.1 mouse_genomes_project 2 27031403 27037645 + Urm1 protein_coding retained_intron MGP_BALBcJ_T0053628.1 MGP_BALBcJ_G0025518.1 mouse_genomes_project 2 27045833 27048250 + Urm1 protein_coding retained_intron MGP_BALBcJ_T0010328.1 MGP_BALBcJ_G0008453.1 mouse_genomes_project 2 7495372 7495469 + Mir297a-2 miRNA miRNA MGP_BALBcJ_T0010419.1 MGP_BALBcJ_G0008544.1 mouse_genomes_project 2 92019296 92019400 - Gm23630 miRNA miRNA MGP_BALBcJ_T0055850.1 MGP_BALBcJ_G0026049.1 mouse_genomes_project 2 86806011 86806950 - MGP_BALBcJ_P0055850 Olfr1215 protein_coding protein_coding MGP_BALBcJ_T0013491.1 MGP_BALBcJ_G0011588.1 mouse_genomes_project 2 37499946 37500313 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058267.1 MGP_BALBcJ_G0026635.1 mouse_genomes_project 2 151011305 151040441 + MGP_BALBcJ_P0058267 6820408C15Rik protein_coding protein_coding MGP_BALBcJ_T0058268.1 MGP_BALBcJ_G0026635.1 mouse_genomes_project 2 151023190 151040440 + MGP_BALBcJ_P0058268 6820408C15Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058269.1 MGP_BALBcJ_G0026635.1 mouse_genomes_project 2 151023217 151035754 + MGP_BALBcJ_P0058269 6820408C15Rik protein_coding protein_coding MGP_BALBcJ_T0052839.1 MGP_BALBcJ_G0025373.1 mouse_genomes_project 2 20533745 20604265 - MGP_BALBcJ_P0052839 Spopl protein_coding protein_coding MGP_BALBcJ_T0052840.1 MGP_BALBcJ_G0025373.1 mouse_genomes_project 2 20538197 20604239 - MGP_BALBcJ_P0052840 Spopl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052841.1 MGP_BALBcJ_G0025373.1 mouse_genomes_project 2 20538795 20604139 - MGP_BALBcJ_P0052841 Spopl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052842.1 MGP_BALBcJ_G0025373.1 mouse_genomes_project 2 20539059 20542749 - Spopl protein_coding retained_intron MGP_BALBcJ_T0052843.1 MGP_BALBcJ_G0025373.1 mouse_genomes_project 2 20545328 20570572 - Spopl protein_coding retained_intron MGP_BALBcJ_T0052844.1 MGP_BALBcJ_G0025373.1 mouse_genomes_project 2 20576314 20604267 - MGP_BALBcJ_P0052844 Spopl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0007198.1 MGP_BALBcJ_G0005901.1 mouse_genomes_project 2 69269235 69276833 + Gm13647 lincRNA lincRNA MGP_BALBcJ_T0013784.1 MGP_BALBcJ_G0011881.1 mouse_genomes_project 2 146218752 146219191 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053097.1 MGP_BALBcJ_G0025418.1 mouse_genomes_project 2 22520483 22522400 + MGP_BALBcJ_P0053097 Fut7 protein_coding protein_coding MGP_BALBcJ_T0053098.1 MGP_BALBcJ_G0025418.1 mouse_genomes_project 2 22520595 22523588 + MGP_BALBcJ_P0053098 Fut7 protein_coding protein_coding MGP_BALBcJ_T0053099.1 MGP_BALBcJ_G0025418.1 mouse_genomes_project 2 22520769 22523591 + MGP_BALBcJ_P0053099 Fut7 protein_coding protein_coding MGP_BALBcJ_T0053100.1 MGP_BALBcJ_G0025418.1 mouse_genomes_project 2 22520910 22523591 + MGP_BALBcJ_P0053100 Fut7 protein_coding protein_coding MGP_BALBcJ_T0053101.1 MGP_BALBcJ_G0025418.1 mouse_genomes_project 2 22521864 22522308 + Fut7 protein_coding processed_transcript MGP_BALBcJ_T0059394.1 MGP_BALBcJ_G0026894.1 mouse_genomes_project 2 166659549 166661053 + MGP_BALBcJ_P0059394 Cebpb protein_coding protein_coding MGP_BALBcJ_T0057722.1 MGP_BALBcJ_G0026497.1 mouse_genomes_project 2 129559590 129578842 + MGP_BALBcJ_P0057722 Hspa12b protein_coding protein_coding MGP_BALBcJ_T0057723.1 MGP_BALBcJ_G0026497.1 mouse_genomes_project 2 129559752 129570092 + MGP_BALBcJ_P0057723 Hspa12b protein_coding protein_coding MGP_BALBcJ_T0057724.1 MGP_BALBcJ_G0026497.1 mouse_genomes_project 2 129559804 129577748 + MGP_BALBcJ_P0057724 Hspa12b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055230.1 MGP_BALBcJ_G0025797.1 mouse_genomes_project 2 69045967 69049314 - MGP_BALBcJ_P0055230 Dlx2 protein_coding protein_coding MGP_BALBcJ_T0055231.1 MGP_BALBcJ_G0025797.1 mouse_genomes_project 2 69047425 69048510 - Dlx2 protein_coding retained_intron MGP_BALBcJ_T0055921.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88435535 88495271 + MGP_BALBcJ_P0055921 Nup160 protein_coding protein_coding MGP_BALBcJ_T0055922.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88443491 88450958 + Nup160 protein_coding processed_transcript MGP_BALBcJ_T0055923.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88447545 88452678 + Nup160 protein_coding processed_transcript MGP_BALBcJ_T0055924.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88448534 88461279 + Nup160 protein_coding processed_transcript MGP_BALBcJ_T0055925.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88458567 88460891 + Nup160 protein_coding processed_transcript MGP_BALBcJ_T0055926.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88476460 88476813 + Nup160 protein_coding processed_transcript MGP_BALBcJ_T0055927.1 MGP_BALBcJ_G0026100.1 mouse_genomes_project 2 88491666 88494727 + Nup160 protein_coding processed_transcript MGP_BALBcJ_T0052793.1 MGP_BALBcJ_G0025364.1 mouse_genomes_project 2 19625939 19696166 + MGP_BALBcJ_P0052793 Gad2 protein_coding protein_coding MGP_BALBcJ_T0052794.1 MGP_BALBcJ_G0025364.1 mouse_genomes_project 2 19627038 19633736 + Gad2 protein_coding processed_transcript MGP_BALBcJ_T0007102.1 MGP_BALBcJ_G0005825.1 mouse_genomes_project 2 1084674 1091102 + Gm13189 lincRNA lincRNA MGP_BALBcJ_T0100955.1 MGP_BALBcJ_G0038991.1 mouse_genomes_project 2 62821292 62821406 - Gm24138 snoRNA snoRNA MGP_BALBcJ_T0010335.1 MGP_BALBcJ_G0008460.1 mouse_genomes_project 2 7512273 7512384 + miRNA miRNA MGP_BALBcJ_T0013735.1 MGP_BALBcJ_G0011832.1 mouse_genomes_project 2 129422685 129423318 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059729.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282003 180297227 + MGP_BALBcJ_P0059729 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059730.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282012 180297295 + MGP_BALBcJ_P0059730 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059731.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282023 180296469 + MGP_BALBcJ_P0059731 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059732.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282043 180297229 + Arfgap1 protein_coding retained_intron MGP_BALBcJ_T0059733.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282045 180297215 + Arfgap1 protein_coding processed_transcript MGP_BALBcJ_T0059734.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282055 180297229 + MGP_BALBcJ_P0059734 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059735.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282057 180287716 + Arfgap1 protein_coding retained_intron MGP_BALBcJ_T0059736.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180282078 180297080 + MGP_BALBcJ_P0059736 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059737.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180285826 180296242 + MGP_BALBcJ_P0059737 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059738.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180285841 180296139 + MGP_BALBcJ_P0059738 Arfgap1 protein_coding protein_coding MGP_BALBcJ_T0059739.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180288272 180291523 + Arfgap1 protein_coding retained_intron MGP_BALBcJ_T0059740.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180288289 180292811 + Arfgap1 protein_coding retained_intron MGP_BALBcJ_T0059741.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180288617 180292295 + Arfgap1 protein_coding retained_intron MGP_BALBcJ_T0059742.1 MGP_BALBcJ_G0026982.1 mouse_genomes_project 2 180295117 180296166 + Arfgap1 protein_coding processed_transcript MGP_BALBcJ_T0053026.1 MGP_BALBcJ_G0025407.1 mouse_genomes_project 2 22360868 22362240 - Ssna1 protein_coding processed_transcript MGP_BALBcJ_T0053027.1 MGP_BALBcJ_G0025407.1 mouse_genomes_project 2 22360868 22362246 - MGP_BALBcJ_P0053027 Ssna1 protein_coding protein_coding MGP_BALBcJ_T0053028.1 MGP_BALBcJ_G0025407.1 mouse_genomes_project 2 22360915 22362268 - Ssna1 protein_coding processed_transcript MGP_BALBcJ_T0053029.1 MGP_BALBcJ_G0025407.1 mouse_genomes_project 2 22361535 22362234 - Ssna1 protein_coding processed_transcript MGP_BALBcJ_T0007235.1 MGP_BALBcJ_G0005931.1 mouse_genomes_project 2 89043325 89048579 - Gm17281 lincRNA lincRNA MGP_BALBcJ_T0098866.1 MGP_BALBcJ_G0036914.1 mouse_genomes_project 2 3918771 3921312 - Gm10855 sense_intronic sense_intronic MGP_BALBcJ_T0056475.1 MGP_BALBcJ_G0026191.1 mouse_genomes_project 2 102663230 102684872 - MGP_BALBcJ_P0056475 Depdc7 protein_coding protein_coding MGP_BALBcJ_T0056476.1 MGP_BALBcJ_G0026191.1 mouse_genomes_project 2 102664027 102664602 - Depdc7 protein_coding retained_intron MGP_BALBcJ_T0007257.1 MGP_BALBcJ_G0005947.1 mouse_genomes_project 2 101118524 101122674 - Gm13869 lincRNA lincRNA MGP_BALBcJ_T0102412.1 MGP_BALBcJ_G0040228.1 mouse_genomes_project 2 84224886 84225828 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013718.1 MGP_BALBcJ_G0011815.1 mouse_genomes_project 2 119782955 119783915 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054100.1 MGP_BALBcJ_G0025583.1 mouse_genomes_project 2 29807500 29842471 + Fam102a protein_coding retained_intron MGP_BALBcJ_T0054101.1 MGP_BALBcJ_G0025583.1 mouse_genomes_project 2 29807501 29808359 + MGP_BALBcJ_P0054101 Fam102a protein_coding protein_coding MGP_BALBcJ_T0054102.1 MGP_BALBcJ_G0025583.1 mouse_genomes_project 2 29807527 29842477 + MGP_BALBcJ_P0054102 Fam102a protein_coding protein_coding MGP_BALBcJ_T0054103.1 MGP_BALBcJ_G0025583.1 mouse_genomes_project 2 29807901 29830877 + MGP_BALBcJ_P0054103 Fam102a protein_coding protein_coding MGP_BALBcJ_T0054104.1 MGP_BALBcJ_G0025583.1 mouse_genomes_project 2 29812358 29832915 + Fam102a protein_coding processed_transcript MGP_BALBcJ_T0056659.1 MGP_BALBcJ_G0026267.1 mouse_genomes_project 2 110499529 110633681 + MGP_BALBcJ_P0056659 Aven protein_coding protein_coding MGP_BALBcJ_T0056660.1 MGP_BALBcJ_G0026267.1 mouse_genomes_project 2 110559888 110629184 + Aven protein_coding processed_transcript MGP_BALBcJ_T0056661.1 MGP_BALBcJ_G0026267.1 mouse_genomes_project 2 110560240 110630019 + MGP_BALBcJ_P0056661 Aven protein_coding protein_coding MGP_BALBcJ_T0013393.1 MGP_BALBcJ_G0011490.1 mouse_genomes_project 2 2256800 2257025 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053446.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24332590 24378123 - Sardh protein_coding processed_transcript MGP_BALBcJ_T0053447.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24332590 24392732 - MGP_BALBcJ_P0053447 Sardh protein_coding protein_coding MGP_BALBcJ_T0053448.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24333394 24336458 - Sardh protein_coding retained_intron MGP_BALBcJ_T0053449.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24333579 24354482 - Sardh protein_coding processed_transcript MGP_BALBcJ_T0053450.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24341015 24363889 - Sardh protein_coding retained_intron MGP_BALBcJ_T0053451.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24355647 24360224 - Sardh protein_coding processed_transcript MGP_BALBcJ_T0053452.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24355683 24370520 - Sardh protein_coding retained_intron MGP_BALBcJ_T0053453.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24386899 24392314 - MGP_BALBcJ_P0053453 Sardh protein_coding protein_coding MGP_BALBcJ_T0053454.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24386917 24393803 - MGP_BALBcJ_P0053454 Sardh protein_coding protein_coding MGP_BALBcJ_T0053455.1 MGP_BALBcJ_G0025485.1 mouse_genomes_project 2 24389716 24392880 - MGP_BALBcJ_P0053455 Sardh protein_coding protein_coding MGP_BALBcJ_T0098862.1 MGP_BALBcJ_G0036910.1 mouse_genomes_project 2 1085870 1089514 + Gm37814 sense_intronic sense_intronic MGP_BALBcJ_T0059339.1 MGP_BALBcJ_G0026882.1 mouse_genomes_project 2 165968401 165988537 + MGP_BALBcJ_P0059339 Ddx27 protein_coding protein_coding MGP_BALBcJ_T0059340.1 MGP_BALBcJ_G0026882.1 mouse_genomes_project 2 165968518 165978938 + MGP_BALBcJ_P0059340 Ddx27 protein_coding protein_coding MGP_BALBcJ_T0059341.1 MGP_BALBcJ_G0026882.1 mouse_genomes_project 2 165968518 165977658 + MGP_BALBcJ_P0059341 Ddx27 protein_coding protein_coding MGP_BALBcJ_T0059342.1 MGP_BALBcJ_G0026882.1 mouse_genomes_project 2 165979325 165980987 + Ddx27 protein_coding retained_intron MGP_BALBcJ_T0059343.1 MGP_BALBcJ_G0026882.1 mouse_genomes_project 2 165980666 165981415 + Ddx27 protein_coding retained_intron MGP_BALBcJ_T0059344.1 MGP_BALBcJ_G0026882.1 mouse_genomes_project 2 165987436 165988493 + Ddx27 protein_coding retained_intron MGP_BALBcJ_T0011485.1 MGP_BALBcJ_G0009610.1 mouse_genomes_project 2 103069144 103069404 - Gm27715 misc_RNA misc_RNA MGP_BALBcJ_T0013739.1 MGP_BALBcJ_G0011836.1 mouse_genomes_project 2 129849985 129850310 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054959.1 MGP_BALBcJ_G0025745.1 mouse_genomes_project 2 60117813 60638506 - MGP_BALBcJ_P0054959 Kcnh7 protein_coding protein_coding MGP_BALBcJ_T0054960.1 MGP_BALBcJ_G0025745.1 mouse_genomes_project 2 60211452 60638515 - MGP_BALBcJ_P0054960 Kcnh7 protein_coding protein_coding MGP_BALBcJ_T0054961.1 MGP_BALBcJ_G0025745.1 mouse_genomes_project 2 60211536 60638398 - MGP_BALBcJ_P0054961 Kcnh7 protein_coding protein_coding MGP_BALBcJ_T0054962.1 MGP_BALBcJ_G0025745.1 mouse_genomes_project 2 60635696 60638490 - Kcnh7 protein_coding processed_transcript MGP_BALBcJ_T0057507.1 MGP_BALBcJ_G0026446.1 mouse_genomes_project 2 126088746 126129444 + Acoxl protein_coding processed_transcript MGP_BALBcJ_T0057508.1 MGP_BALBcJ_G0026446.1 mouse_genomes_project 2 126105392 126381298 + MGP_BALBcJ_P0057508 Acoxl protein_coding protein_coding MGP_BALBcJ_T0057509.1 MGP_BALBcJ_G0026446.1 mouse_genomes_project 2 126160040 126380973 + MGP_BALBcJ_P0057509 Acoxl protein_coding protein_coding MGP_BALBcJ_T0055284.1 MGP_BALBcJ_G0025808.1 mouse_genomes_project 2 70884233 70909887 + MGP_BALBcJ_P0055284 Scrn3 protein_coding protein_coding MGP_BALBcJ_T0055285.1 MGP_BALBcJ_G0025808.1 mouse_genomes_project 2 70884286 70892403 + MGP_BALBcJ_P0055285 Scrn3 protein_coding protein_coding MGP_BALBcJ_T0055286.1 MGP_BALBcJ_G0025808.1 mouse_genomes_project 2 70884291 70887434 + Scrn3 protein_coding processed_transcript MGP_BALBcJ_T0055287.1 MGP_BALBcJ_G0025808.1 mouse_genomes_project 2 70884291 70901871 + Scrn3 protein_coding processed_transcript MGP_BALBcJ_T0055288.1 MGP_BALBcJ_G0025808.1 mouse_genomes_project 2 70884308 70893629 + Scrn3 protein_coding processed_transcript MGP_BALBcJ_T0055289.1 MGP_BALBcJ_G0025808.1 mouse_genomes_project 2 70891006 70908368 + Scrn3 protein_coding processed_transcript MGP_BALBcJ_T0055625.1 MGP_BALBcJ_G0025880.1 mouse_genomes_project 2 82261072 82262559 - MGP_BALBcJ_P0055625 Gm19426 protein_coding protein_coding MGP_BALBcJ_T0058160.1 MGP_BALBcJ_G0026608.1 mouse_genomes_project 2 149412851 149458478 + MGP_BALBcJ_P0058160 Pygb protein_coding protein_coding MGP_BALBcJ_T0058161.1 MGP_BALBcJ_G0026608.1 mouse_genomes_project 2 149415473 149440473 + Pygb protein_coding processed_transcript MGP_BALBcJ_T0058162.1 MGP_BALBcJ_G0026608.1 mouse_genomes_project 2 149441793 149444232 + Pygb protein_coding retained_intron MGP_BALBcJ_T0058163.1 MGP_BALBcJ_G0026608.1 mouse_genomes_project 2 149450326 149455193 + Pygb protein_coding retained_intron MGP_BALBcJ_T0058164.1 MGP_BALBcJ_G0026608.1 mouse_genomes_project 2 149455107 149457354 + Pygb protein_coding retained_intron MGP_BALBcJ_T0001075.1 MGP_BALBcJ_G0001003.1 mouse_genomes_project 2 65366174 65371079 + TEC TEC MGP_BALBcJ_T0007388.1 MGP_BALBcJ_G0006055.1 mouse_genomes_project 2 168263205 168265958 + 9430093N23Rik lincRNA lincRNA MGP_BALBcJ_T0003941.1 MGP_BALBcJ_G0003519.1 mouse_genomes_project 2 31094647 31102423 + Nron antisense antisense MGP_BALBcJ_T0003942.1 MGP_BALBcJ_G0003519.1 mouse_genomes_project 2 31094659 31101287 + Nron antisense antisense MGP_BALBcJ_T0003943.1 MGP_BALBcJ_G0003519.1 mouse_genomes_project 2 31094690 31100270 + Nron antisense antisense MGP_BALBcJ_T0013853.1 MGP_BALBcJ_G0011950.1 mouse_genomes_project 2 169515742 169516048 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055793.1 MGP_BALBcJ_G0025997.1 mouse_genomes_project 2 85467854 85468790 + MGP_BALBcJ_P0055793 Olfr1140 protein_coding protein_coding MGP_BALBcJ_T0017875.1 MGP_BALBcJ_G0015429.1 mouse_genomes_project 2 164780713 164782064 + BC046401 processed_transcript processed_transcript MGP_BALBcJ_T0099706.1 MGP_BALBcJ_G0037742.1 mouse_genomes_project 2 146421245 146421352 - Gm25516 snRNA snRNA MGP_BALBcJ_T0058242.1 MGP_BALBcJ_G0026628.1 mouse_genomes_project 2 150822261 150873608 + MGP_BALBcJ_P0058242 Csnk2a1 protein_coding protein_coding MGP_BALBcJ_T0058243.1 MGP_BALBcJ_G0026628.1 mouse_genomes_project 2 150822298 150865098 + Csnk2a1 protein_coding retained_intron MGP_BALBcJ_T0058244.1 MGP_BALBcJ_G0026628.1 mouse_genomes_project 2 150822318 150856049 + MGP_BALBcJ_P0058244 Csnk2a1 protein_coding protein_coding MGP_BALBcJ_T0058245.1 MGP_BALBcJ_G0026628.1 mouse_genomes_project 2 150822330 150852616 + MGP_BALBcJ_P0058245 Csnk2a1 protein_coding protein_coding MGP_BALBcJ_T0058246.1 MGP_BALBcJ_G0026628.1 mouse_genomes_project 2 150822335 150848072 + Csnk2a1 protein_coding retained_intron MGP_BALBcJ_T0053550.1 MGP_BALBcJ_G0025505.1 mouse_genomes_project 2 26000266 26018415 - MGP_BALBcJ_P0053550 Gtf3c4 protein_coding protein_coding MGP_BALBcJ_T0053551.1 MGP_BALBcJ_G0025505.1 mouse_genomes_project 2 26000272 26018341 - MGP_BALBcJ_P0053551 Gtf3c4 protein_coding protein_coding MGP_BALBcJ_T0053552.1 MGP_BALBcJ_G0025505.1 mouse_genomes_project 2 26013258 26018341 - Gtf3c4 protein_coding processed_transcript MGP_BALBcJ_T0053553.1 MGP_BALBcJ_G0025505.1 mouse_genomes_project 2 26013358 26018407 - Gtf3c4 protein_coding processed_transcript MGP_BALBcJ_T0013383.1 MGP_BALBcJ_G0011480.1 mouse_genomes_project 2 469774 470090 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013660.1 MGP_BALBcJ_G0011757.1 mouse_genomes_project 2 98368495 98369842 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007355.1 MGP_BALBcJ_G0006027.1 mouse_genomes_project 2 160055982 160056574 - Gm14242 lincRNA lincRNA MGP_BALBcJ_T0054773.1 MGP_BALBcJ_G0025714.1 mouse_genomes_project 2 54543806 54551963 - MGP_BALBcJ_P0054773 Nr4a2 protein_coding protein_coding MGP_BALBcJ_T0054774.1 MGP_BALBcJ_G0025714.1 mouse_genomes_project 2 54543810 54562216 - MGP_BALBcJ_P0054774 Nr4a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054775.1 MGP_BALBcJ_G0025714.1 mouse_genomes_project 2 54548981 54552016 - Nr4a2 protein_coding processed_transcript MGP_BALBcJ_T0054776.1 MGP_BALBcJ_G0025714.1 mouse_genomes_project 2 54549968 54551351 - Nr4a2 protein_coding processed_transcript MGP_BALBcJ_T0056862.1 MGP_BALBcJ_G0026315.1 mouse_genomes_project 2 117366988 117377129 + MGP_BALBcJ_P0056862 Dll4 protein_coding protein_coding MGP_BALBcJ_T0056863.1 MGP_BALBcJ_G0026315.1 mouse_genomes_project 2 117369741 117373343 + Dll4 protein_coding processed_transcript MGP_BALBcJ_T0054037.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577825 29623193 - MGP_BALBcJ_P0054037 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054038.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577825 29623154 - MGP_BALBcJ_P0054038 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054039.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577825 29623229 - MGP_BALBcJ_P0054039 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054040.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577825 29623181 - MGP_BALBcJ_P0054040 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054041.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577825 29623174 - MGP_BALBcJ_P0054041 Dnm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054042.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577825 29623175 - MGP_BALBcJ_P0054042 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054043.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577832 29623125 - MGP_BALBcJ_P0054043 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054044.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29577851 29589932 - MGP_BALBcJ_P0054044 Dnm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054045.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29578195 29623161 - MGP_BALBcJ_P0054045 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054046.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29578278 29579990 - Dnm1 protein_coding retained_intron MGP_BALBcJ_T0054047.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29578829 29582278 - MGP_BALBcJ_P0054047 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054048.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29578833 29623193 - MGP_BALBcJ_P0054048 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054049.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29579204 29582248 - MGP_BALBcJ_P0054049 Dnm1 protein_coding protein_coding MGP_BALBcJ_T0054050.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29579617 29582244 - MGP_BALBcJ_P0054050 Dnm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054051.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29581581 29586693 - Dnm1 protein_coding processed_transcript MGP_BALBcJ_T0054052.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29581596 29582432 - Dnm1 protein_coding retained_intron MGP_BALBcJ_T0054053.1 MGP_BALBcJ_G0025576.1 mouse_genomes_project 2 29609901 29623142 - MGP_BALBcJ_P0054053 Dnm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056382.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101328253 101368825 + MGP_BALBcJ_P0056382 Elf5 protein_coding protein_coding MGP_BALBcJ_T0056383.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101328278 101362736 + Elf5 protein_coding retained_intron MGP_BALBcJ_T0056384.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101340629 101368828 + MGP_BALBcJ_P0056384 Elf5 protein_coding protein_coding MGP_BALBcJ_T0056385.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101340693 101367680 + MGP_BALBcJ_P0056385 Elf5 protein_coding protein_coding MGP_BALBcJ_T0056386.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101341394 101366870 + MGP_BALBcJ_P0056386 Elf5 protein_coding protein_coding MGP_BALBcJ_T0056387.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101364328 101366854 + Elf5 protein_coding processed_transcript MGP_BALBcJ_T0056388.1 MGP_BALBcJ_G0026173.1 mouse_genomes_project 2 101366576 101367662 + Elf5 protein_coding processed_transcript MGP_BALBcJ_T0013592.1 MGP_BALBcJ_G0011689.1 mouse_genomes_project 2 76419369 76419537 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007202.1 MGP_BALBcJ_G0005905.1 mouse_genomes_project 2 70301632 70370711 - 6430710C18Rik lincRNA lincRNA MGP_BALBcJ_T0007203.1 MGP_BALBcJ_G0005905.1 mouse_genomes_project 2 70302291 70306867 - 6430710C18Rik lincRNA lincRNA MGP_BALBcJ_T0007204.1 MGP_BALBcJ_G0005905.1 mouse_genomes_project 2 70341556 70370756 - 6430710C18Rik lincRNA lincRNA MGP_BALBcJ_T0007205.1 MGP_BALBcJ_G0005905.1 mouse_genomes_project 2 70341873 70357004 - 6430710C18Rik lincRNA lincRNA MGP_BALBcJ_T0055869.1 MGP_BALBcJ_G0026066.1 mouse_genomes_project 2 87129950 87130868 - MGP_BALBcJ_P0055869 Olfr1233 protein_coding protein_coding MGP_BALBcJ_T0053102.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22525919 22545757 + MGP_BALBcJ_P0053102 Abca2 protein_coding protein_coding MGP_BALBcJ_T0053103.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22538524 22540134 + Abca2 protein_coding processed_transcript MGP_BALBcJ_T0053104.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22540164 22541030 + Abca2 protein_coding processed_transcript MGP_BALBcJ_T0053105.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22542378 22544082 + Abca2 protein_coding processed_transcript MGP_BALBcJ_T0053106.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22542881 22544284 + Abca2 protein_coding processed_transcript MGP_BALBcJ_T0053107.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22543038 22543759 + Abca2 protein_coding processed_transcript MGP_BALBcJ_T0053108.1 MGP_BALBcJ_G0025419.1 mouse_genomes_project 2 22543059 22543693 + Abca2 protein_coding processed_transcript MGP_BALBcJ_T0003947.1 MGP_BALBcJ_G0003523.1 mouse_genomes_project 2 35559366 35561351 + Gm13556 antisense antisense MGP_BALBcJ_T0013408.1 MGP_BALBcJ_G0011505.1 mouse_genomes_project 2 11766777 11767112 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001032.1 MGP_BALBcJ_G0000960.1 mouse_genomes_project 2 10078987 10080600 + TEC TEC MGP_BALBcJ_T0054436.1 MGP_BALBcJ_G0025637.1 mouse_genomes_project 2 33544332 33566104 + MGP_BALBcJ_P0054436 Ptgs1 protein_coding protein_coding MGP_BALBcJ_T0054437.1 MGP_BALBcJ_G0025637.1 mouse_genomes_project 2 33544462 33551895 + Ptgs1 protein_coding processed_transcript MGP_BALBcJ_T0054438.1 MGP_BALBcJ_G0025637.1 mouse_genomes_project 2 33550080 33566101 + Ptgs1 protein_coding processed_transcript MGP_BALBcJ_T0054439.1 MGP_BALBcJ_G0025637.1 mouse_genomes_project 2 33554544 33555300 + Ptgs1 protein_coding retained_intron MGP_BALBcJ_T0054440.1 MGP_BALBcJ_G0025637.1 mouse_genomes_project 2 33556306 33559037 + Ptgs1 protein_coding retained_intron MGP_BALBcJ_T0055218.1 MGP_BALBcJ_G0025795.1 mouse_genomes_project 2 68952362 69026975 + MGP_BALBcJ_P0055218 Metap1d protein_coding protein_coding MGP_BALBcJ_T0055219.1 MGP_BALBcJ_G0025795.1 mouse_genomes_project 2 68952419 69017739 + Metap1d protein_coding processed_transcript MGP_BALBcJ_T0055220.1 MGP_BALBcJ_G0025795.1 mouse_genomes_project 2 68952437 69026978 + Metap1d protein_coding processed_transcript MGP_BALBcJ_T0055221.1 MGP_BALBcJ_G0025795.1 mouse_genomes_project 2 68952449 69026564 + Metap1d protein_coding processed_transcript MGP_BALBcJ_T0055222.1 MGP_BALBcJ_G0025795.1 mouse_genomes_project 2 69012021 69018936 + Metap1d protein_coding processed_transcript MGP_BALBcJ_T0055223.1 MGP_BALBcJ_G0025795.1 mouse_genomes_project 2 69017195 69018068 + Metap1d protein_coding processed_transcript MGP_BALBcJ_T0058270.1 MGP_BALBcJ_G0026636.1 mouse_genomes_project 2 151056076 151061600 - MGP_BALBcJ_P0058270 Defb23 protein_coding protein_coding MGP_BALBcJ_T0054110.1 MGP_BALBcJ_G0025586.1 mouse_genomes_project 2 29847517 29848528 + Pip5kl1 protein_coding processed_transcript MGP_BALBcJ_T0054111.1 MGP_BALBcJ_G0025586.1 mouse_genomes_project 2 29848438 29856893 + MGP_BALBcJ_P0054111 Pip5kl1 protein_coding protein_coding MGP_BALBcJ_T0054112.1 MGP_BALBcJ_G0025586.1 mouse_genomes_project 2 29848563 29856882 + MGP_BALBcJ_P0054112 Pip5kl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054113.1 MGP_BALBcJ_G0025586.1 mouse_genomes_project 2 29853037 29856883 + Pip5kl1 protein_coding retained_intron MGP_BALBcJ_T0013597.1 MGP_BALBcJ_G0011694.1 mouse_genomes_project 2 78086565 78086847 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017816.1 MGP_BALBcJ_G0015403.1 mouse_genomes_project 2 120902575 120918452 + 4930417H01Rik processed_transcript processed_transcript MGP_BALBcJ_T0017817.1 MGP_BALBcJ_G0015403.1 mouse_genomes_project 2 120903435 120920928 + 4930417H01Rik processed_transcript processed_transcript MGP_BALBcJ_T0017818.1 MGP_BALBcJ_G0015403.1 mouse_genomes_project 2 120903437 120918452 + 4930417H01Rik processed_transcript processed_transcript MGP_BALBcJ_T0017819.1 MGP_BALBcJ_G0015403.1 mouse_genomes_project 2 120904772 120920929 + 4930417H01Rik processed_transcript processed_transcript MGP_BALBcJ_T0017820.1 MGP_BALBcJ_G0015403.1 mouse_genomes_project 2 120904774 120918563 + 4930417H01Rik processed_transcript processed_transcript MGP_BALBcJ_T0017821.1 MGP_BALBcJ_G0015403.1 mouse_genomes_project 2 120908579 120921788 + 4930417H01Rik processed_transcript processed_transcript MGP_BALBcJ_T0003907.1 MGP_BALBcJ_G0003492.1 mouse_genomes_project 2 22902823 22905229 + antisense antisense MGP_BALBcJ_T0100977.1 MGP_BALBcJ_G0039013.1 mouse_genomes_project 2 128449186 128449273 + Gm22424 snoRNA snoRNA MGP_BALBcJ_T0017761.1 MGP_BALBcJ_G0015378.1 mouse_genomes_project 2 86568674 86572268 - Gm13760 processed_transcript processed_transcript MGP_BALBcJ_T0017762.1 MGP_BALBcJ_G0015378.1 mouse_genomes_project 2 86568984 86572740 - Gm13760 processed_transcript processed_transcript MGP_BALBcJ_T0056686.1 MGP_BALBcJ_G0026274.1 mouse_genomes_project 2 111978267 111982288 - MGP_BALBcJ_P0056686 Gjd2 protein_coding protein_coding MGP_BALBcJ_T0055618.1 MGP_BALBcJ_G0025878.1 mouse_genomes_project 2 82240814 82245695 - MGP_BALBcJ_P0055618 Clp1 protein_coding protein_coding MGP_BALBcJ_T0055619.1 MGP_BALBcJ_G0025878.1 mouse_genomes_project 2 82241573 82245803 - MGP_BALBcJ_P0055619 Clp1 protein_coding protein_coding MGP_BALBcJ_T0055620.1 MGP_BALBcJ_G0025878.1 mouse_genomes_project 2 82241575 82245729 - Clp1 protein_coding processed_transcript MGP_BALBcJ_T0100943.1 MGP_BALBcJ_G0038979.1 mouse_genomes_project 2 40147143 40147275 + Gm24350 snoRNA snoRNA MGP_BALBcJ_T0059426.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167473583 167587926 - MGP_BALBcJ_P0059426 Nfatc2 protein_coding protein_coding MGP_BALBcJ_T0059427.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167473583 167587821 - MGP_BALBcJ_P0059427 Nfatc2 protein_coding protein_coding MGP_BALBcJ_T0059428.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167473586 167549349 - Nfatc2 protein_coding processed_transcript MGP_BALBcJ_T0059429.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167483885 167515846 - MGP_BALBcJ_P0059429 Nfatc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0059430.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167515306 167599057 - Nfatc2 protein_coding processed_transcript MGP_BALBcJ_T0059431.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167516210 167599082 - MGP_BALBcJ_P0059431 Nfatc2 protein_coding protein_coding MGP_BALBcJ_T0059432.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167516496 167587752 - MGP_BALBcJ_P0059432 Nfatc2 protein_coding protein_coding MGP_BALBcJ_T0059433.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167530571 167587892 - Nfatc2 protein_coding retained_intron MGP_BALBcJ_T0059434.1 MGP_BALBcJ_G0026903.1 mouse_genomes_project 2 167563535 167587926 - Nfatc2 protein_coding retained_intron MGP_BALBcJ_T0053486.1 MGP_BALBcJ_G0025491.1 mouse_genomes_project 2 25243652 25252160 - MGP_BALBcJ_P0053486 Fcnb protein_coding protein_coding MGP_BALBcJ_T0053487.1 MGP_BALBcJ_G0025491.1 mouse_genomes_project 2 25245373 25252160 - MGP_BALBcJ_P0053487 Fcnb protein_coding protein_coding MGP_BALBcJ_T0053488.1 MGP_BALBcJ_G0025491.1 mouse_genomes_project 2 25247013 25252160 - MGP_BALBcJ_P0053488 Fcnb protein_coding protein_coding MGP_BALBcJ_T0056441.1 MGP_BALBcJ_G0026182.1 mouse_genomes_project 2 101991891 101992178 - MGP_BALBcJ_P0056441 protein_coding protein_coding MGP_BALBcJ_T0017728.1 MGP_BALBcJ_G0015353.1 mouse_genomes_project 2 32858495 32867660 - Gm13446 processed_transcript processed_transcript MGP_BALBcJ_T0017729.1 MGP_BALBcJ_G0015353.1 mouse_genomes_project 2 32863806 32867443 - Gm13446 processed_transcript processed_transcript MGP_BALBcJ_T0099670.1 MGP_BALBcJ_G0037706.1 mouse_genomes_project 2 34561167 34561274 + Gm22306 snRNA snRNA MGP_BALBcJ_T0053360.1 MGP_BALBcJ_G0025466.1 mouse_genomes_project 2 23722950 23734593 - Agpat2 protein_coding processed_transcript MGP_BALBcJ_T0053361.1 MGP_BALBcJ_G0025466.1 mouse_genomes_project 2 23722950 23734714 - MGP_BALBcJ_P0053361 Agpat2 protein_coding protein_coding MGP_BALBcJ_T0053362.1 MGP_BALBcJ_G0025466.1 mouse_genomes_project 2 23724435 23734799 - Agpat2 protein_coding processed_transcript MGP_BALBcJ_T0053363.1 MGP_BALBcJ_G0025466.1 mouse_genomes_project 2 23726050 23734098 - Agpat2 protein_coding processed_transcript MGP_BALBcJ_T0053364.1 MGP_BALBcJ_G0025466.1 mouse_genomes_project 2 23726373 23734308 - MGP_BALBcJ_P0053364 Agpat2 protein_coding protein_coding MGP_BALBcJ_T0001084.1 MGP_BALBcJ_G0001012.1 mouse_genomes_project 2 76548186 76675708 + TEC TEC MGP_BALBcJ_T0001056.1 MGP_BALBcJ_G0000984.1 mouse_genomes_project 2 30901346 30901625 + TEC TEC MGP_BALBcJ_T0052447.1 MGP_BALBcJ_G0025307.1 mouse_genomes_project 2 6896676 6899346 + MGP_BALBcJ_P0052447 4930412O13Rik protein_coding protein_coding MGP_BALBcJ_T0052448.1 MGP_BALBcJ_G0025307.1 mouse_genomes_project 2 6898060 6898760 + MGP_BALBcJ_P0052448 4930412O13Rik protein_coding protein_coding MGP_BALBcJ_T0055870.1 MGP_BALBcJ_G0026067.1 mouse_genomes_project 2 87147519 87148464 - MGP_BALBcJ_P0055870 Olfr1234 protein_coding protein_coding MGP_BALBcJ_T0055871.1 MGP_BALBcJ_G0026067.1 mouse_genomes_project 2 87147519 87149898 - MGP_BALBcJ_P0055871 Olfr1234 protein_coding protein_coding MGP_BALBcJ_T0055872.1 MGP_BALBcJ_G0026067.1 mouse_genomes_project 2 87148600 87149902 - Olfr1234 protein_coding processed_transcript MGP_BALBcJ_T0017794.1 MGP_BALBcJ_G0015394.1 mouse_genomes_project 2 111982231 112040291 + A530058N18Rik processed_transcript antisense MGP_BALBcJ_T0017795.1 MGP_BALBcJ_G0015394.1 mouse_genomes_project 2 111982235 112033968 + A530058N18Rik processed_transcript processed_transcript MGP_BALBcJ_T0013713.1 MGP_BALBcJ_G0011810.1 mouse_genomes_project 2 117933849 117934184 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007315.1 MGP_BALBcJ_G0005994.1 mouse_genomes_project 2 134275505 134276488 - Gm14210 lincRNA lincRNA MGP_BALBcJ_T0056498.1 MGP_BALBcJ_G0026198.1 mouse_genomes_project 2 103175504 103331618 + MGP_BALBcJ_P0056498 Them7 protein_coding protein_coding MGP_BALBcJ_T0056499.1 MGP_BALBcJ_G0026198.1 mouse_genomes_project 2 103175526 103330859 + Them7 protein_coding processed_transcript MGP_BALBcJ_T0059377.1 MGP_BALBcJ_G0026889.1 mouse_genomes_project 2 166444983 166456854 - MGP_BALBcJ_P0059377 Spata2 protein_coding protein_coding MGP_BALBcJ_T0059378.1 MGP_BALBcJ_G0026889.1 mouse_genomes_project 2 166445021 166456812 - MGP_BALBcJ_P0059378 Spata2 protein_coding protein_coding MGP_BALBcJ_T0059379.1 MGP_BALBcJ_G0026889.1 mouse_genomes_project 2 166448108 166449419 - Spata2 protein_coding retained_intron MGP_BALBcJ_T0059380.1 MGP_BALBcJ_G0026889.1 mouse_genomes_project 2 166448943 166456839 - Spata2 protein_coding processed_transcript MGP_BALBcJ_T0059381.1 MGP_BALBcJ_G0026889.1 mouse_genomes_project 2 166448994 166456812 - Spata2 protein_coding processed_transcript MGP_BALBcJ_T0059382.1 MGP_BALBcJ_G0026889.1 mouse_genomes_project 2 166449101 166456845 - Spata2 protein_coding processed_transcript MGP_BALBcJ_T0003887.1 MGP_BALBcJ_G0003477.1 mouse_genomes_project 2 11818616 11842097 - Gm13269 antisense antisense MGP_BALBcJ_T0003888.1 MGP_BALBcJ_G0003477.1 mouse_genomes_project 2 11818616 11845642 - Gm13269 antisense antisense MGP_BALBcJ_T0098870.1 MGP_BALBcJ_G0036918.1 mouse_genomes_project 2 112934398 112935418 + Gm28492 sense_intronic sense_intronic MGP_BALBcJ_T0101013.1 MGP_BALBcJ_G0039049.1 mouse_genomes_project 2 167894941 167895070 - Gm25214 snoRNA snoRNA MGP_BALBcJ_T0017831.1 MGP_BALBcJ_G0015407.1 mouse_genomes_project 2 127327485 127332225 - Gm14022 processed_transcript processed_transcript MGP_BALBcJ_T0010469.1 MGP_BALBcJ_G0008594.1 mouse_genomes_project 2 173373679 173373747 + Gm27591 miRNA miRNA MGP_BALBcJ_T0007233.1 MGP_BALBcJ_G0005929.1 mouse_genomes_project 2 82740504 82751674 + Gm13715 lincRNA lincRNA MGP_BALBcJ_T0057894.1 MGP_BALBcJ_G0026533.1 mouse_genomes_project 2 134547520 134857954 - MGP_BALBcJ_P0057894 Pak7 protein_coding protein_coding MGP_BALBcJ_T0057895.1 MGP_BALBcJ_G0026533.1 mouse_genomes_project 2 134548313 134857976 - MGP_BALBcJ_P0057895 Pak7 protein_coding protein_coding MGP_BALBcJ_T0057896.1 MGP_BALBcJ_G0026533.1 mouse_genomes_project 2 134734295 134857983 - Pak7 protein_coding retained_intron MGP_BALBcJ_T0007324.1 MGP_BALBcJ_G0006002.1 mouse_genomes_project 2 145365446 145376908 - Gm14114 lincRNA lincRNA MGP_BALBcJ_T0100965.1 MGP_BALBcJ_G0039001.1 mouse_genomes_project 2 95091145 95091274 + Gm22313 snoRNA snoRNA MGP_BALBcJ_T0059748.1 MGP_BALBcJ_G0026984.1 mouse_genomes_project 2 180333058 180355038 - MGP_BALBcJ_P0059748 Chrna4 protein_coding protein_coding MGP_BALBcJ_T0059749.1 MGP_BALBcJ_G0026984.1 mouse_genomes_project 2 180333059 180343019 - MGP_BALBcJ_P0059749 Chrna4 protein_coding protein_coding MGP_BALBcJ_T0059750.1 MGP_BALBcJ_G0026984.1 mouse_genomes_project 2 180336990 180355268 - MGP_BALBcJ_P0059750 Chrna4 protein_coding protein_coding MGP_BALBcJ_T0059751.1 MGP_BALBcJ_G0026984.1 mouse_genomes_project 2 180344115 180355188 - Chrna4 protein_coding processed_transcript MGP_BALBcJ_T0059752.1 MGP_BALBcJ_G0026984.1 mouse_genomes_project 2 180348714 180359533 - MGP_BALBcJ_P0059752 Chrna4 protein_coding protein_coding MGP_BALBcJ_T0007394.1 MGP_BALBcJ_G0006060.1 mouse_genomes_project 2 169100624 169110050 - A630075F10Rik lincRNA lincRNA MGP_BALBcJ_T0056625.1 MGP_BALBcJ_G0026245.1 mouse_genomes_project 2 109867596 109868535 - MGP_BALBcJ_P0056625 Olfr1305 protein_coding protein_coding MGP_BALBcJ_T0055817.1 MGP_BALBcJ_G0026019.1 mouse_genomes_project 2 85957006 85957957 - MGP_BALBcJ_P0055817 Olfr1170 protein_coding protein_coding MGP_BALBcJ_T0010464.1 MGP_BALBcJ_G0008589.1 mouse_genomes_project 2 167166741 167166836 - Gm24561 miRNA miRNA MGP_BALBcJ_T0004153.1 MGP_BALBcJ_G0003671.1 mouse_genomes_project 2 166631852 166637877 + Gm14320 antisense antisense MGP_BALBcJ_T0056295.1 MGP_BALBcJ_G0026155.1 mouse_genomes_project 2 92141336 92247662 - MGP_BALBcJ_P0056295 Ttc17 protein_coding protein_coding MGP_BALBcJ_T0056296.1 MGP_BALBcJ_G0026155.1 mouse_genomes_project 2 92141338 92247676 - MGP_BALBcJ_P0056296 Ttc17 protein_coding protein_coding MGP_BALBcJ_T0056297.1 MGP_BALBcJ_G0026155.1 mouse_genomes_project 2 92168608 92247685 - MGP_BALBcJ_P0056297 Ttc17 protein_coding protein_coding MGP_BALBcJ_T0056298.1 MGP_BALBcJ_G0026155.1 mouse_genomes_project 2 92195285 92203013 - Ttc17 protein_coding processed_transcript MGP_BALBcJ_T0056299.1 MGP_BALBcJ_G0026155.1 mouse_genomes_project 2 92219819 92245998 - Ttc17 protein_coding processed_transcript MGP_BALBcJ_T0100924.1 MGP_BALBcJ_G0038960.1 mouse_genomes_project 2 16783157 16783289 + Gm24670 snoRNA snoRNA MGP_BALBcJ_T0007161.1 MGP_BALBcJ_G0005869.1 mouse_genomes_project 2 32528582 32530303 + Gm13605 lincRNA lincRNA MGP_BALBcJ_T0013789.1 MGP_BALBcJ_G0011886.1 mouse_genomes_project 2 148683040 148684035 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056197.1 MGP_BALBcJ_G0026136.1 mouse_genomes_project 2 90200536 90201602 + 1700029I15Rik protein_coding retained_intron MGP_BALBcJ_T0056198.1 MGP_BALBcJ_G0026136.1 mouse_genomes_project 2 90200916 90201602 + MGP_BALBcJ_P0056198 1700029I15Rik protein_coding protein_coding MGP_BALBcJ_T0056199.1 MGP_BALBcJ_G0026136.1 mouse_genomes_project 2 90200916 90203707 + MGP_BALBcJ_P0056199 1700029I15Rik protein_coding protein_coding MGP_BALBcJ_T0056200.1 MGP_BALBcJ_G0026136.1 mouse_genomes_project 2 90200916 90201588 + MGP_BALBcJ_P0056200 1700029I15Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101007.1 MGP_BALBcJ_G0039043.1 mouse_genomes_project 2 163517243 163517374 + Gm24473 snoRNA snoRNA MGP_BALBcJ_T0058274.1 MGP_BALBcJ_G0026640.1 mouse_genomes_project 2 151116446 151119639 + MGP_BALBcJ_P0058274 Defb28 protein_coding protein_coding MGP_BALBcJ_T0099688.1 MGP_BALBcJ_G0037724.1 mouse_genomes_project 2 100805529 100805636 + Gm23731 snRNA snRNA MGP_BALBcJ_T0013495.1 MGP_BALBcJ_G0011592.1 mouse_genomes_project 2 39456641 39456874 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101668.1 MGP_BALBcJ_G0039660.1 mouse_genomes_project 2 50182191 50182576 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0102429.1 MGP_BALBcJ_G0040245.1 mouse_genomes_project 2 87898727 87899652 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0059125.1 MGP_BALBcJ_G0026840.1 mouse_genomes_project 2 163551485 163552808 + MGP_BALBcJ_P0059125 Wfdc10 protein_coding protein_coding MGP_BALBcJ_T0058176.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149572531 149648978 - MGP_BALBcJ_P0058176 Ninl protein_coding protein_coding MGP_BALBcJ_T0058177.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149575052 149579876 - Ninl protein_coding processed_transcript MGP_BALBcJ_T0058178.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149575566 149591796 - MGP_BALBcJ_P0058178 Ninl protein_coding protein_coding MGP_BALBcJ_T0058179.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149591494 149592928 - Ninl protein_coding retained_intron MGP_BALBcJ_T0058180.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149597562 149609613 - MGP_BALBcJ_P0058180 Ninl protein_coding protein_coding MGP_BALBcJ_T0058181.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149601902 149609747 - Ninl protein_coding processed_transcript MGP_BALBcJ_T0058182.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149601994 149648912 - Ninl protein_coding processed_transcript MGP_BALBcJ_T0058183.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149604715 149648956 - Ninl protein_coding processed_transcript MGP_BALBcJ_T0058184.1 MGP_BALBcJ_G0026611.1 mouse_genomes_project 2 149612655 149679580 - MGP_BALBcJ_P0058184 Ninl protein_coding protein_coding MGP_BALBcJ_T0004042.1 MGP_BALBcJ_G0003588.1 mouse_genomes_project 2 112024495 112033929 + C130080G10Rik antisense antisense MGP_BALBcJ_T0004043.1 MGP_BALBcJ_G0003588.1 mouse_genomes_project 2 112024556 112033906 + C130080G10Rik antisense antisense MGP_BALBcJ_T0004044.1 MGP_BALBcJ_G0003588.1 mouse_genomes_project 2 112025397 112033394 + C130080G10Rik antisense antisense MGP_BALBcJ_T0004045.1 MGP_BALBcJ_G0003588.1 mouse_genomes_project 2 112028374 112033698 + C130080G10Rik antisense antisense MGP_BALBcJ_T0004046.1 MGP_BALBcJ_G0003588.1 mouse_genomes_project 2 112028399 112037688 + C130080G10Rik antisense antisense MGP_BALBcJ_T0013385.1 MGP_BALBcJ_G0011482.1 mouse_genomes_project 2 623953 625022 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099708.1 MGP_BALBcJ_G0037744.1 mouse_genomes_project 2 151766900 151767003 + Gm25643 snRNA snRNA MGP_BALBcJ_T0017745.1 MGP_BALBcJ_G0015363.1 mouse_genomes_project 2 67335980 67336750 - Gm13625 processed_transcript processed_transcript MGP_BALBcJ_T0055860.1 MGP_BALBcJ_G0026058.1 mouse_genomes_project 2 86965248 86966184 - MGP_BALBcJ_P0055860 Olfr1224-ps1 protein_coding protein_coding MGP_BALBcJ_T0053499.1 MGP_BALBcJ_G0025494.1 mouse_genomes_project 2 25640322 25644170 - 1700007K13Rik protein_coding processed_transcript MGP_BALBcJ_T0053500.1 MGP_BALBcJ_G0025494.1 mouse_genomes_project 2 25640322 25644650 - MGP_BALBcJ_P0053500 1700007K13Rik protein_coding protein_coding MGP_BALBcJ_T0053501.1 MGP_BALBcJ_G0025494.1 mouse_genomes_project 2 25640669 25644634 - MGP_BALBcJ_P0053501 1700007K13Rik protein_coding protein_coding MGP_BALBcJ_T0055864.1 MGP_BALBcJ_G0026062.1 mouse_genomes_project 2 87063450 87064469 - MGP_BALBcJ_P0055864 Olfr1229 protein_coding protein_coding MGP_BALBcJ_T0055865.1 MGP_BALBcJ_G0026062.1 mouse_genomes_project 2 87063507 87069245 - MGP_BALBcJ_P0055865 Olfr1229 protein_coding protein_coding MGP_BALBcJ_T0007258.1 MGP_BALBcJ_G0005948.1 mouse_genomes_project 2 101253305 101287294 - A930006I01Rik lincRNA lincRNA MGP_BALBcJ_T0007308.1 MGP_BALBcJ_G0005988.1 mouse_genomes_project 2 131048324 131100346 + AU019990 lincRNA lincRNA MGP_BALBcJ_T0007309.1 MGP_BALBcJ_G0005988.1 mouse_genomes_project 2 131048324 131103242 + AU019990 lincRNA lincRNA MGP_BALBcJ_T0053057.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22446155 22450225 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053058.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22446166 22450211 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053059.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22446169 22446754 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053060.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22446169 22450239 - MGP_BALBcJ_P0053060 Dpp7 protein_coding protein_coding MGP_BALBcJ_T0053061.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22447033 22449938 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053062.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22447239 22450177 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053063.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22448347 22450177 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053064.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22448876 22450233 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053065.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22449321 22450226 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0053066.1 MGP_BALBcJ_G0025413.1 mouse_genomes_project 2 22449582 22450212 - Dpp7 protein_coding processed_transcript MGP_BALBcJ_T0055766.1 MGP_BALBcJ_G0025979.1 mouse_genomes_project 2 85122178 85123150 + MGP_BALBcJ_P0055766 Olfr1123 protein_coding protein_coding MGP_BALBcJ_T0102398.1 MGP_BALBcJ_G0040214.1 mouse_genomes_project 2 82891376 82892272 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013390.1 MGP_BALBcJ_G0011487.1 mouse_genomes_project 2 1903764 1904065 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056704.1 MGP_BALBcJ_G0026279.1 mouse_genomes_project 2 113588097 113787321 + MGP_BALBcJ_P0056704 BC052040 protein_coding protein_coding MGP_BALBcJ_T0056705.1 MGP_BALBcJ_G0026279.1 mouse_genomes_project 2 113588114 113787321 + MGP_BALBcJ_P0056705 BC052040 protein_coding protein_coding MGP_BALBcJ_T0056706.1 MGP_BALBcJ_G0026279.1 mouse_genomes_project 2 113588182 113647335 + BC052040 protein_coding processed_transcript MGP_BALBcJ_T0052369.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2765550 2816597 - MGP_BALBcJ_P0052369 Cdc123 protein_coding protein_coding MGP_BALBcJ_T0052370.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2765921 2769858 - Cdc123 protein_coding processed_transcript MGP_BALBcJ_T0052371.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2769620 2775645 - Cdc123 protein_coding retained_intron MGP_BALBcJ_T0052372.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2776102 2782211 - Cdc123 protein_coding processed_transcript MGP_BALBcJ_T0052373.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2776221 2804434 - Cdc123 protein_coding retained_intron MGP_BALBcJ_T0052374.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2780943 2804929 - MGP_BALBcJ_P0052374 Cdc123 protein_coding protein_coding MGP_BALBcJ_T0052375.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2782106 2816374 - Cdc123 protein_coding retained_intron MGP_BALBcJ_T0052376.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2791753 2793748 - Cdc123 protein_coding retained_intron MGP_BALBcJ_T0052377.1 MGP_BALBcJ_G0025296.1 mouse_genomes_project 2 2793444 2816284 - Cdc123 protein_coding processed_transcript MGP_BALBcJ_T0013846.1 MGP_BALBcJ_G0011943.1 mouse_genomes_project 2 166046306 166046504 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017791.1 MGP_BALBcJ_G0015391.1 mouse_genomes_project 2 107595521 107596449 + Gm20638 processed_transcript processed_transcript MGP_BALBcJ_T0013671.1 MGP_BALBcJ_G0011768.1 mouse_genomes_project 2 102479899 102480922 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053378.1 MGP_BALBcJ_G0025471.1 mouse_genomes_project 2 24048893 24054309 - MGP_BALBcJ_P0053378 Med22 protein_coding protein_coding MGP_BALBcJ_T0053379.1 MGP_BALBcJ_G0025471.1 mouse_genomes_project 2 24049219 24054201 - MGP_BALBcJ_P0053379 Med22 protein_coding protein_coding MGP_BALBcJ_T0053380.1 MGP_BALBcJ_G0025471.1 mouse_genomes_project 2 24051740 24054210 - MGP_BALBcJ_P0053380 Med22 protein_coding protein_coding MGP_BALBcJ_T0004086.1 MGP_BALBcJ_G0003618.1 mouse_genomes_project 2 133782117 134047059 - 9630028H03Rik antisense antisense MGP_BALBcJ_T0004087.1 MGP_BALBcJ_G0003618.1 mouse_genomes_project 2 134044004 134046771 - 9630028H03Rik antisense antisense MGP_BALBcJ_T0054211.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30239955 30242893 + MGP_BALBcJ_P0054211 Rpl12 protein_coding protein_coding MGP_BALBcJ_T0054212.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30240116 30243742 + Rpl12 protein_coding retained_intron MGP_BALBcJ_T0054213.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30240125 30242442 + Rpl12 protein_coding retained_intron MGP_BALBcJ_T0054214.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30240128 30241335 + Rpl12 protein_coding retained_intron MGP_BALBcJ_T0054215.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30240136 30241708 + Rpl12 protein_coding retained_intron MGP_BALBcJ_T0054216.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30240136 30242440 + MGP_BALBcJ_P0054216 Rpl12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054217.1 MGP_BALBcJ_G0025602.1 mouse_genomes_project 2 30240662 30241463 + Rpl12 protein_coding retained_intron MGP_BALBcJ_T0055813.1 MGP_BALBcJ_G0026015.1 mouse_genomes_project 2 85825715 85826696 - MGP_BALBcJ_P0055813 Olfr1164 protein_coding protein_coding MGP_BALBcJ_T0007320.1 MGP_BALBcJ_G0005999.1 mouse_genomes_project 2 137076470 137136286 + Gm14061 lincRNA lincRNA MGP_BALBcJ_T0056584.1 MGP_BALBcJ_G0026214.1 mouse_genomes_project 2 108192058 108235066 - MGP_BALBcJ_P0056584 Bbox1 protein_coding protein_coding MGP_BALBcJ_T0056585.1 MGP_BALBcJ_G0026214.1 mouse_genomes_project 2 108221344 108243810 - MGP_BALBcJ_P0056585 Bbox1 protein_coding protein_coding MGP_BALBcJ_T0057368.1 MGP_BALBcJ_G0026413.1 mouse_genomes_project 2 124387410 124400831 + MGP_BALBcJ_P0057368 Dtwd1 protein_coding protein_coding MGP_BALBcJ_T0057369.1 MGP_BALBcJ_G0026413.1 mouse_genomes_project 2 124389807 124400834 + MGP_BALBcJ_P0057369 Dtwd1 protein_coding protein_coding MGP_BALBcJ_T0013814.1 MGP_BALBcJ_G0011911.1 mouse_genomes_project 2 155112657 155113448 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013428.1 MGP_BALBcJ_G0011525.1 mouse_genomes_project 2 16179639 16181037 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099699.1 MGP_BALBcJ_G0037735.1 mouse_genomes_project 2 127589375 127589526 - Gm25703 snRNA snRNA MGP_BALBcJ_T0007401.1 MGP_BALBcJ_G0006066.1 mouse_genomes_project 2 171061903 171062904 - Gm14272 lincRNA lincRNA MGP_BALBcJ_T0100959.1 MGP_BALBcJ_G0038995.1 mouse_genomes_project 2 78457456 78457587 + Gm22652 snoRNA snoRNA MGP_BALBcJ_T0057243.1 MGP_BALBcJ_G0026379.1 mouse_genomes_project 2 120217275 120293958 - MGP_BALBcJ_P0057243 Patl2 protein_coding protein_coding MGP_BALBcJ_T0052703.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15747715 15751491 + MGP_BALBcJ_P0052703 Commd3 protein_coding protein_coding MGP_BALBcJ_T0052704.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15747754 15751492 + MGP_BALBcJ_P0052704 Commd3 protein_coding protein_coding MGP_BALBcJ_T0052705.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15747764 15749953 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052706.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15747766 15749896 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052707.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15747767 15749773 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052708.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15747854 15749661 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052709.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15748918 15749658 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052710.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15749221 15751189 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052711.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15749345 15751242 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052712.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15749607 15751184 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052713.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15749684 15750267 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0052714.1 MGP_BALBcJ_G0025348.1 mouse_genomes_project 2 15749909 15750762 + Commd3 protein_coding processed_transcript MGP_BALBcJ_T0053261.1 MGP_BALBcJ_G0025454.1 mouse_genomes_project 2 23380979 23386777 - MGP_BALBcJ_P0053261 C030048H21Rik protein_coding protein_coding MGP_BALBcJ_T0003877.1 MGP_BALBcJ_G0003468.1 mouse_genomes_project 2 3172524 3301731 + A230108P19Rik antisense antisense MGP_BALBcJ_T0058375.1 MGP_BALBcJ_G0026671.1 mouse_genomes_project 2 152241699 152257406 - MGP_BALBcJ_P0058375 Commd7 protein_coding protein_coding MGP_BALBcJ_T0058376.1 MGP_BALBcJ_G0026671.1 mouse_genomes_project 2 152243496 152257356 - Commd7 protein_coding retained_intron MGP_BALBcJ_T0058377.1 MGP_BALBcJ_G0026671.1 mouse_genomes_project 2 152243496 152257365 - MGP_BALBcJ_P0058377 Commd7 protein_coding protein_coding MGP_BALBcJ_T0013599.1 MGP_BALBcJ_G0011696.1 mouse_genomes_project 2 78194182 78194790 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057435.1 MGP_BALBcJ_G0026426.1 mouse_genomes_project 2 125393095 125397756 - MGP_BALBcJ_P0057435 Itpripl1 protein_coding protein_coding MGP_BALBcJ_T0057436.1 MGP_BALBcJ_G0026426.1 mouse_genomes_project 2 125394722 125397619 - MGP_BALBcJ_P0057436 Itpripl1 protein_coding protein_coding MGP_BALBcJ_T0057437.1 MGP_BALBcJ_G0026426.1 mouse_genomes_project 2 125394842 125396904 - MGP_BALBcJ_P0057437 Itpripl1 protein_coding protein_coding MGP_BALBcJ_T0053329.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23586316 23632612 - MGP_BALBcJ_P0053329 Notch1 protein_coding protein_coding MGP_BALBcJ_T0053330.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23590631 23591161 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053331.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23593884 23596027 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053332.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23593884 23595068 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053333.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23593884 23594781 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053334.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23593884 23595208 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053335.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23593884 23594577 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053336.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23596956 23598163 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053337.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23598238 23598912 - Notch1 protein_coding processed_transcript MGP_BALBcJ_T0053338.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23599689 23645394 - MGP_BALBcJ_P0053338 Notch1 protein_coding protein_coding MGP_BALBcJ_T0053339.1 MGP_BALBcJ_G0025463.1 mouse_genomes_project 2 23626944 23632614 - Notch1 protein_coding retained_intron MGP_BALBcJ_T0013587.1 MGP_BALBcJ_G0011684.1 mouse_genomes_project 2 74886763 74887873 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059540.1 MGP_BALBcJ_G0026935.1 mouse_genomes_project 2 172786835 172833822 + MGP_BALBcJ_P0059540 Rab22a protein_coding protein_coding MGP_BALBcJ_T0059541.1 MGP_BALBcJ_G0026935.1 mouse_genomes_project 2 172786835 172833794 + MGP_BALBcJ_P0059541 Rab22a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059542.1 MGP_BALBcJ_G0026935.1 mouse_genomes_project 2 172786931 172827633 + MGP_BALBcJ_P0059542 Rab22a protein_coding protein_coding MGP_BALBcJ_T0057533.1 MGP_BALBcJ_G0026451.1 mouse_genomes_project 2 126966119 127068129 + MGP_BALBcJ_P0057533 Mertk protein_coding protein_coding MGP_BALBcJ_T0057534.1 MGP_BALBcJ_G0026451.1 mouse_genomes_project 2 127038278 127068015 + Mertk protein_coding processed_transcript MGP_BALBcJ_T0017891.1 MGP_BALBcJ_G0015438.1 mouse_genomes_project 2 180074771 180084351 - Gm14343 processed_transcript processed_transcript MGP_BALBcJ_T0059607.1 MGP_BALBcJ_G0026952.1 mouse_genomes_project 2 177701503 177704771 - MGP_BALBcJ_P0059607 Ppp1r3d protein_coding protein_coding MGP_BALBcJ_T0007280.1 MGP_BALBcJ_G0005967.1 mouse_genomes_project 2 114075678 114094251 + G630016G05Rik lincRNA lincRNA MGP_BALBcJ_T0007281.1 MGP_BALBcJ_G0005967.1 mouse_genomes_project 2 114076323 114094250 + G630016G05Rik lincRNA lincRNA MGP_BALBcJ_T0004018.1 MGP_BALBcJ_G0003573.1 mouse_genomes_project 2 86735965 86742787 - Gm13763 antisense antisense MGP_BALBcJ_T0058263.1 MGP_BALBcJ_G0026632.1 mouse_genomes_project 2 150961213 150969101 - MGP_BALBcJ_P0058263 Nrsn2 protein_coding protein_coding MGP_BALBcJ_T0100932.1 MGP_BALBcJ_G0038968.1 mouse_genomes_project 2 24057492 24057566 + Gm22879 snoRNA snoRNA MGP_BALBcJ_T0013583.1 MGP_BALBcJ_G0011680.1 mouse_genomes_project 2 72457541 72458176 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013461.1 MGP_BALBcJ_G0011558.1 mouse_genomes_project 2 29539969 29540287 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013647.1 MGP_BALBcJ_G0011744.1 mouse_genomes_project 2 92225804 92226401 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013827.1 MGP_BALBcJ_G0011924.1 mouse_genomes_project 2 157288485 157288677 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052654.1 MGP_BALBcJ_G0025340.1 mouse_genomes_project 2 12593045 13319897 + MGP_BALBcJ_P0052654 Malrd1 protein_coding protein_coding MGP_BALBcJ_T0004098.1 MGP_BALBcJ_G0003626.1 mouse_genomes_project 2 142764450 142766059 + 4930444E06Rik antisense antisense MGP_BALBcJ_T0013636.1 MGP_BALBcJ_G0011733.1 mouse_genomes_project 2 88802408 88802753 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055682.1 MGP_BALBcJ_G0025897.1 mouse_genomes_project 2 82904273 82905203 - MGP_BALBcJ_P0055682 Olfr992 protein_coding protein_coding MGP_BALBcJ_T0010475.1 MGP_BALBcJ_G0008600.1 mouse_genomes_project 2 179702934 179703038 + Mir133a-2 miRNA miRNA MGP_BALBcJ_T0010332.1 MGP_BALBcJ_G0008457.1 mouse_genomes_project 2 7509921 7510048 + Gm26398 miRNA miRNA MGP_BALBcJ_T0017780.1 MGP_BALBcJ_G0015387.1 mouse_genomes_project 2 92247147 92252676 + 2810002D19Rik processed_transcript processed_transcript MGP_BALBcJ_T0052475.1 MGP_BALBcJ_G0025315.1 mouse_genomes_project 2 8182931 8273925 + Prkcq protein_coding retained_intron MGP_BALBcJ_T0052476.1 MGP_BALBcJ_G0025315.1 mouse_genomes_project 2 8183129 8295517 + Prkcq protein_coding retained_intron MGP_BALBcJ_T0052477.1 MGP_BALBcJ_G0025315.1 mouse_genomes_project 2 8233379 8312340 + MGP_BALBcJ_P0052477 Prkcq protein_coding protein_coding MGP_BALBcJ_T0052478.1 MGP_BALBcJ_G0025315.1 mouse_genomes_project 2 8237279 8311230 + MGP_BALBcJ_P0052478 Prkcq protein_coding protein_coding MGP_BALBcJ_T0052479.1 MGP_BALBcJ_G0025315.1 mouse_genomes_project 2 8258589 8264009 + Prkcq protein_coding retained_intron MGP_BALBcJ_T0052480.1 MGP_BALBcJ_G0025315.1 mouse_genomes_project 2 8261120 8311809 + Prkcq protein_coding processed_transcript MGP_BALBcJ_T0013455.1 MGP_BALBcJ_G0011552.1 mouse_genomes_project 2 26696149 26696440 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010375.1 MGP_BALBcJ_G0008500.1 mouse_genomes_project 2 27049816 27049913 - Mir219a-2 miRNA miRNA MGP_BALBcJ_T0053410.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24099360 24110405 - MGP_BALBcJ_P0053410 Rexo4 protein_coding protein_coding MGP_BALBcJ_T0053411.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24099363 24110405 - MGP_BALBcJ_P0053411 Rexo4 protein_coding protein_coding MGP_BALBcJ_T0053412.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24100123 24102384 - Rexo4 protein_coding processed_transcript MGP_BALBcJ_T0053413.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24100225 24101482 - Rexo4 protein_coding processed_transcript MGP_BALBcJ_T0053414.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24100338 24110298 - MGP_BALBcJ_P0053414 Rexo4 protein_coding protein_coding MGP_BALBcJ_T0053415.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24100798 24102117 - Rexo4 protein_coding processed_transcript MGP_BALBcJ_T0053416.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24102130 24110297 - Rexo4 protein_coding processed_transcript MGP_BALBcJ_T0053417.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24103833 24106103 - Rexo4 protein_coding processed_transcript MGP_BALBcJ_T0053418.1 MGP_BALBcJ_G0025477.1 mouse_genomes_project 2 24108885 24110343 - Rexo4 protein_coding processed_transcript MGP_BALBcJ_T0052512.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8726895 8764548 + MGP_BALBcJ_P0052512 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052513.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8726934 8763856 + Il15ra protein_coding processed_transcript MGP_BALBcJ_T0052514.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8726954 8764193 + MGP_BALBcJ_P0052514 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052515.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8726974 8764199 + MGP_BALBcJ_P0052515 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052516.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8726980 8748802 + Il15ra protein_coding retained_intron MGP_BALBcJ_T0052517.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8726992 8764199 + Il15ra protein_coding processed_transcript MGP_BALBcJ_T0052518.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727048 8764213 + MGP_BALBcJ_P0052518 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052519.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727157 8763632 + Il15ra protein_coding processed_transcript MGP_BALBcJ_T0052520.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727317 8750341 + MGP_BALBcJ_P0052520 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052521.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727364 8750628 + Il15ra protein_coding retained_intron MGP_BALBcJ_T0052522.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727382 8764217 + MGP_BALBcJ_P0052522 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052523.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727415 8763632 + MGP_BALBcJ_P0052523 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052524.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727415 8764548 + MGP_BALBcJ_P0052524 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052525.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727416 8763632 + MGP_BALBcJ_P0052525 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052526.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8727453 8763480 + MGP_BALBcJ_P0052526 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052527.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8748562 8750522 + Il15ra protein_coding retained_intron MGP_BALBcJ_T0052528.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8748666 8763648 + MGP_BALBcJ_P0052528 Il15ra protein_coding protein_coding MGP_BALBcJ_T0052529.1 MGP_BALBcJ_G0025320.1 mouse_genomes_project 2 8753399 8764199 + Il15ra protein_coding retained_intron MGP_BALBcJ_T0053051.1 MGP_BALBcJ_G0025412.1 mouse_genomes_project 2 22425229 22437043 + MGP_BALBcJ_P0053051 Man1b1 protein_coding protein_coding MGP_BALBcJ_T0053052.1 MGP_BALBcJ_G0025412.1 mouse_genomes_project 2 22425620 22446092 + MGP_BALBcJ_P0053052 Man1b1 protein_coding protein_coding MGP_BALBcJ_T0053053.1 MGP_BALBcJ_G0025412.1 mouse_genomes_project 2 22425653 22438311 + Man1b1 protein_coding processed_transcript MGP_BALBcJ_T0053054.1 MGP_BALBcJ_G0025412.1 mouse_genomes_project 2 22425664 22431061 + Man1b1 protein_coding processed_transcript MGP_BALBcJ_T0053055.1 MGP_BALBcJ_G0025412.1 mouse_genomes_project 2 22431004 22439025 + Man1b1 protein_coding processed_transcript MGP_BALBcJ_T0053056.1 MGP_BALBcJ_G0025412.1 mouse_genomes_project 2 22438759 22439463 + Man1b1 protein_coding processed_transcript MGP_BALBcJ_T0102442.1 MGP_BALBcJ_G0040258.1 mouse_genomes_project 2 137673840 137674069 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001024.1 MGP_BALBcJ_G0000952.1 mouse_genomes_project 2 8390956 8392077 - TEC TEC MGP_BALBcJ_T0057496.1 MGP_BALBcJ_G0026442.1 mouse_genomes_project 2 125960562 125986754 - MGP_BALBcJ_P0057496 Mall protein_coding protein_coding MGP_BALBcJ_T0004057.1 MGP_BALBcJ_G0003599.1 mouse_genomes_project 2 123446814 123456816 - Gm14002 antisense antisense MGP_BALBcJ_T0055147.1 MGP_BALBcJ_G0025782.1 mouse_genomes_project 2 67504238 67918281 + MGP_BALBcJ_P0055147 Myo3b protein_coding protein_coding MGP_BALBcJ_T0055148.1 MGP_BALBcJ_G0025782.1 mouse_genomes_project 2 67550670 67918284 + MGP_BALBcJ_P0055148 Myo3b protein_coding protein_coding MGP_BALBcJ_T0055149.1 MGP_BALBcJ_G0025782.1 mouse_genomes_project 2 67563899 67671786 + MGP_BALBcJ_P0055149 Myo3b protein_coding protein_coding MGP_BALBcJ_T0011495.1 MGP_BALBcJ_G0009620.1 mouse_genomes_project 2 144001821 144002146 - Gm22390 misc_RNA misc_RNA MGP_BALBcJ_T0059088.1 MGP_BALBcJ_G0026826.1 mouse_genomes_project 2 163314283 163333169 - MGP_BALBcJ_P0059088 Sdc4 protein_coding protein_coding MGP_BALBcJ_T0059089.1 MGP_BALBcJ_G0026826.1 mouse_genomes_project 2 163315934 163333870 - Sdc4 protein_coding processed_transcript MGP_BALBcJ_T0100987.1 MGP_BALBcJ_G0039023.1 mouse_genomes_project 2 146704005 146704318 + Gm24221 snoRNA snoRNA MGP_BALBcJ_T0055907.1 MGP_BALBcJ_G0026089.1 mouse_genomes_project 2 87800064 87800898 + MGP_BALBcJ_P0055907 Olfr1261 protein_coding protein_coding MGP_BALBcJ_T0053142.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22598798 22603851 + MGP_BALBcJ_P0053142 Fbxw5 protein_coding protein_coding MGP_BALBcJ_T0053143.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22599195 22601930 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0053144.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22599197 22602193 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0053145.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22599238 22601566 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0053146.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22599258 22601984 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0053147.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22600937 22601964 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0053148.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22601417 22602180 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0053149.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22601605 22603214 + MGP_BALBcJ_P0053149 Fbxw5 protein_coding protein_coding MGP_BALBcJ_T0053150.1 MGP_BALBcJ_G0025425.1 mouse_genomes_project 2 22602286 22603325 + Fbxw5 protein_coding processed_transcript MGP_BALBcJ_T0100988.1 MGP_BALBcJ_G0039024.1 mouse_genomes_project 2 147174403 147174515 + Gm25866 snoRNA snoRNA MGP_BALBcJ_T0003882.1 MGP_BALBcJ_G0003473.1 mouse_genomes_project 2 8529905 8538759 + Gm10851 antisense antisense MGP_BALBcJ_T0059556.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173409893 173464408 + MGP_BALBcJ_P0059556 Gnas protein_coding protein_coding MGP_BALBcJ_T0059557.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173409893 173422380 + MGP_BALBcJ_P0059557 Gnas protein_coding protein_coding MGP_BALBcJ_T0059558.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173410931 173464408 + MGP_BALBcJ_P0059558 Gnas protein_coding protein_coding MGP_BALBcJ_T0059559.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173423344 173472819 + Gnas protein_coding processed_transcript MGP_BALBcJ_T0059560.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173423344 173473061 + MGP_BALBcJ_P0059560 Gnas protein_coding protein_coding MGP_BALBcJ_T0059561.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173423344 173427502 + MGP_BALBcJ_P0059561 Gnas protein_coding protein_coding MGP_BALBcJ_T0059562.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173423344 173473029 + MGP_BALBcJ_P0059562 Gnas protein_coding protein_coding MGP_BALBcJ_T0059563.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173423344 173472819 + MGP_BALBcJ_P0059563 Gnas protein_coding protein_coding MGP_BALBcJ_T0059564.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173453616 173471558 + Gnas protein_coding processed_transcript MGP_BALBcJ_T0059565.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173453745 173472819 + Gnas protein_coding processed_transcript MGP_BALBcJ_T0059566.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173453776 173454991 + Gnas protein_coding processed_transcript MGP_BALBcJ_T0059567.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173453803 173464408 + Gnas protein_coding processed_transcript MGP_BALBcJ_T0059568.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173454070 173471596 + Gnas protein_coding processed_transcript MGP_BALBcJ_T0059569.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173456049 173473061 + MGP_BALBcJ_P0059569 Gnas protein_coding protein_coding MGP_BALBcJ_T0059570.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173456140 173473061 + MGP_BALBcJ_P0059570 Gnas protein_coding protein_coding MGP_BALBcJ_T0059571.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173456330 173464408 + MGP_BALBcJ_P0059571 Gnas protein_coding protein_coding MGP_BALBcJ_T0059572.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173456339 173473065 + MGP_BALBcJ_P0059572 Gnas protein_coding protein_coding MGP_BALBcJ_T0059574.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173468020 173471726 + Gnas protein_coding retained_intron MGP_BALBcJ_T0059575.1 MGP_BALBcJ_G0026940.1 mouse_genomes_project 2 173470966 173472045 + Gnas protein_coding retained_intron MGP_BALBcJ_T0053509.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25685744 25715535 + MGP_BALBcJ_P0053509 Ralgds protein_coding protein_coding MGP_BALBcJ_T0053510.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25685945 25725666 + MGP_BALBcJ_P0053510 Ralgds protein_coding protein_coding MGP_BALBcJ_T0053511.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25705964 25725651 + MGP_BALBcJ_P0053511 Ralgds protein_coding protein_coding MGP_BALBcJ_T0053512.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25706151 25725221 + MGP_BALBcJ_P0053512 Ralgds protein_coding protein_coding MGP_BALBcJ_T0053513.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25706158 25725655 + Ralgds protein_coding retained_intron MGP_BALBcJ_T0053514.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25713310 25715487 + Ralgds protein_coding retained_intron MGP_BALBcJ_T0053515.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25714917 25717661 + MGP_BALBcJ_P0053515 Ralgds protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053516.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25717877 25719805 + Ralgds protein_coding retained_intron MGP_BALBcJ_T0053517.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25720134 25721561 + Ralgds protein_coding retained_intron MGP_BALBcJ_T0053518.1 MGP_BALBcJ_G0025498.1 mouse_genomes_project 2 25721642 25724910 + MGP_BALBcJ_P0053518 Ralgds protein_coding protein_coding MGP_BALBcJ_T0013505.1 MGP_BALBcJ_G0011602.1 mouse_genomes_project 2 46624714 46625143 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013508.1 MGP_BALBcJ_G0011605.1 mouse_genomes_project 2 47867462 47867744 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017853.1 MGP_BALBcJ_G0015420.1 mouse_genomes_project 2 155381787 155385976 - Gm14169 processed_transcript processed_transcript MGP_BALBcJ_T0013761.1 MGP_BALBcJ_G0011858.1 mouse_genomes_project 2 141078476 141099061 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055366.1 MGP_BALBcJ_G0025827.1 mouse_genomes_project 2 72395825 72449578 + MGP_BALBcJ_P0055366 Mtx2 protein_coding protein_coding MGP_BALBcJ_T0055367.1 MGP_BALBcJ_G0025827.1 mouse_genomes_project 2 72395852 72439957 + Mtx2 protein_coding retained_intron MGP_BALBcJ_T0055368.1 MGP_BALBcJ_G0025827.1 mouse_genomes_project 2 72440123 72447651 + Mtx2 protein_coding retained_intron MGP_BALBcJ_T0057573.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851612 127869493 + Sirpa protein_coding processed_transcript MGP_BALBcJ_T0057574.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851616 127869496 + Sirpa protein_coding processed_transcript MGP_BALBcJ_T0057575.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851616 127890831 + MGP_BALBcJ_P0057575 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057576.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851616 127874884 + MGP_BALBcJ_P0057576 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057577.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851616 127890831 + MGP_BALBcJ_P0057577 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057578.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851642 127869685 + Sirpa protein_coding processed_transcript MGP_BALBcJ_T0057579.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851691 127890839 + MGP_BALBcJ_P0057579 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057580.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851972 127890831 + MGP_BALBcJ_P0057580 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057581.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127851982 127890839 + MGP_BALBcJ_P0057581 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057582.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127852333 127890839 + MGP_BALBcJ_P0057582 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057583.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127852340 127889201 + Sirpa protein_coding processed_transcript MGP_BALBcJ_T0057584.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127852346 127888909 + MGP_BALBcJ_P0057584 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057585.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127852391 127888796 + MGP_BALBcJ_P0057585 Sirpa protein_coding protein_coding MGP_BALBcJ_T0057586.1 MGP_BALBcJ_G0026466.1 mouse_genomes_project 2 127879316 127886644 + Sirpa protein_coding retained_intron MGP_BALBcJ_T0056465.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102599860 102627119 - Tcp11l1 protein_coding processed_transcript MGP_BALBcJ_T0056468.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102620835 102652983 - MGP_BALBcJ_P0056468 Tcp11l1 protein_coding protein_coding MGP_BALBcJ_T0056469.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102622795 102652989 - MGP_BALBcJ_P0056469 Tcp11l1 protein_coding protein_coding MGP_BALBcJ_T0056470.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102627632 102652996 - Tcp11l1 protein_coding retained_intron MGP_BALBcJ_T0056471.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102638148 102647108 - Tcp11l1 protein_coding processed_transcript MGP_BALBcJ_T0056472.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102639694 102652920 - Tcp11l1 protein_coding processed_transcript MGP_BALBcJ_T0056473.1 MGP_BALBcJ_G0026189.1 mouse_genomes_project 2 102645590 102652993 - Tcp11l1 protein_coding processed_transcript MGP_BALBcJ_T0056634.1 MGP_BALBcJ_G0026254.1 mouse_genomes_project 2 110076677 110077616 - MGP_BALBcJ_P0056634 Olfr1314 protein_coding protein_coding MGP_BALBcJ_T0054777.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54669320 54800099 + Gpd2 protein_coding processed_transcript MGP_BALBcJ_T0054778.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54669363 54802965 + MGP_BALBcJ_P0054778 Gpd2 protein_coding protein_coding MGP_BALBcJ_T0054779.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54669982 54802965 + MGP_BALBcJ_P0054779 Gpd2 protein_coding protein_coding MGP_BALBcJ_T0054780.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54670067 54802965 + MGP_BALBcJ_P0054780 Gpd2 protein_coding protein_coding MGP_BALBcJ_T0054781.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54676008 54738973 + Gpd2 protein_coding processed_transcript MGP_BALBcJ_T0054782.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54696817 54699791 + Gpd2 protein_coding processed_transcript MGP_BALBcJ_T0054783.1 MGP_BALBcJ_G0025715.1 mouse_genomes_project 2 54699059 54699791 + Gpd2 protein_coding processed_transcript MGP_BALBcJ_T0056636.1 MGP_BALBcJ_G0026256.1 mouse_genomes_project 2 110153161 110153836 + MGP_BALBcJ_P0056636 Olfr1317 protein_coding protein_coding MGP_BALBcJ_T0056791.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116850038 116875076 + MGP_BALBcJ_P0056791 Knstrn protein_coding protein_coding MGP_BALBcJ_T0056792.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116850267 116871621 + MGP_BALBcJ_P0056792 Knstrn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056793.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116850267 116871553 + MGP_BALBcJ_P0056793 Knstrn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056794.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116850312 116868390 + MGP_BALBcJ_P0056794 Knstrn protein_coding protein_coding MGP_BALBcJ_T0056795.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116850331 116871440 + MGP_BALBcJ_P0056795 Knstrn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056796.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116850461 116871503 + MGP_BALBcJ_P0056796 Knstrn protein_coding protein_coding MGP_BALBcJ_T0056797.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116868981 116874526 + MGP_BALBcJ_P0056797 Knstrn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056798.1 MGP_BALBcJ_G0026298.1 mouse_genomes_project 2 116871446 116891168 + MGP_BALBcJ_P0056798 Knstrn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059841.1 MGP_BALBcJ_G0026998.1 mouse_genomes_project 2 180712679 180790737 - MGP_BALBcJ_P0059841 Zbtb46 protein_coding protein_coding MGP_BALBcJ_T0059842.1 MGP_BALBcJ_G0026998.1 mouse_genomes_project 2 180715803 180752405 - MGP_BALBcJ_P0059842 Zbtb46 protein_coding protein_coding MGP_BALBcJ_T0059843.1 MGP_BALBcJ_G0026998.1 mouse_genomes_project 2 180735534 180790737 - MGP_BALBcJ_P0059843 Zbtb46 protein_coding protein_coding MGP_BALBcJ_T0059844.1 MGP_BALBcJ_G0026998.1 mouse_genomes_project 2 180749570 180790737 - Zbtb46 protein_coding retained_intron MGP_BALBcJ_T0059845.1 MGP_BALBcJ_G0026998.1 mouse_genomes_project 2 180752244 180790690 - MGP_BALBcJ_P0059845 Zbtb46 protein_coding protein_coding MGP_BALBcJ_T0058496.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892236 153897965 + Itch protein_coding retained_intron MGP_BALBcJ_T0058497.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892236 153926468 + Itch protein_coding retained_intron MGP_BALBcJ_T0058498.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892236 153978509 + MGP_BALBcJ_P0058498 Itch protein_coding protein_coding MGP_BALBcJ_T0058499.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892251 153929262 + Itch protein_coding retained_intron MGP_BALBcJ_T0058500.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892258 153954898 + Itch protein_coding processed_transcript MGP_BALBcJ_T0058501.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892286 153978507 + MGP_BALBcJ_P0058501 Itch protein_coding protein_coding MGP_BALBcJ_T0058502.1 MGP_BALBcJ_G0026704.1 mouse_genomes_project 2 153892288 153964843 + Itch protein_coding retained_intron MGP_BALBcJ_T0057569.1 MGP_BALBcJ_G0026464.1 mouse_genomes_project 2 127630839 127637653 - MGP_BALBcJ_P0057569 Il1b protein_coding protein_coding MGP_BALBcJ_T0057570.1 MGP_BALBcJ_G0026464.1 mouse_genomes_project 2 127631389 127633643 - Il1b protein_coding processed_transcript MGP_BALBcJ_T0057571.1 MGP_BALBcJ_G0026464.1 mouse_genomes_project 2 127636022 127637653 - Il1b protein_coding retained_intron MGP_BALBcJ_T0058448.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153242015 153256445 - MGP_BALBcJ_P0058448 Necab3 protein_coding protein_coding MGP_BALBcJ_T0058449.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153242015 153256460 - MGP_BALBcJ_P0058449 Necab3 protein_coding protein_coding MGP_BALBcJ_T0058450.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153242661 153244411 - Necab3 protein_coding retained_intron MGP_BALBcJ_T0058451.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153244662 153256484 - MGP_BALBcJ_P0058451 Necab3 protein_coding protein_coding MGP_BALBcJ_T0058453.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153244757 153256438 - Necab3 protein_coding processed_transcript MGP_BALBcJ_T0058457.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153251884 153256446 - Necab3 protein_coding retained_intron MGP_BALBcJ_T0058458.1 MGP_BALBcJ_G0026691.1 mouse_genomes_project 2 153252262 153254873 - Necab3 protein_coding retained_intron MGP_BALBcJ_T0056609.1 MGP_BALBcJ_G0026229.1 mouse_genomes_project 2 109263044 109263764 - MGP_BALBcJ_P0056609 protein_coding protein_coding MGP_BALBcJ_T0007327.1 MGP_BALBcJ_G0006005.1 mouse_genomes_project 2 146488492 146520614 - 9030622O22Rik lincRNA lincRNA MGP_BALBcJ_T0007328.1 MGP_BALBcJ_G0006005.1 mouse_genomes_project 2 146517114 146588820 - 9030622O22Rik lincRNA lincRNA MGP_BALBcJ_T0007329.1 MGP_BALBcJ_G0006005.1 mouse_genomes_project 2 146517268 146586889 - 9030622O22Rik lincRNA lincRNA MGP_BALBcJ_T0010470.1 MGP_BALBcJ_G0008595.1 mouse_genomes_project 2 173392647 173392726 - Mir296 miRNA miRNA MGP_BALBcJ_T0056730.1 MGP_BALBcJ_G0026282.1 mouse_genomes_project 2 115137954 115199513 + MGP_BALBcJ_P0056730 Spred1 protein_coding protein_coding MGP_BALBcJ_T0056731.1 MGP_BALBcJ_G0026282.1 mouse_genomes_project 2 115138218 115190088 + MGP_BALBcJ_P0056731 Spred1 protein_coding protein_coding MGP_BALBcJ_T0003955.1 MGP_BALBcJ_G0003530.1 mouse_genomes_project 2 42446572 42449485 + Zeb2os antisense antisense MGP_BALBcJ_T0003956.1 MGP_BALBcJ_G0003530.1 mouse_genomes_project 2 42447673 42449485 + Zeb2os antisense antisense MGP_BALBcJ_T0013860.1 MGP_BALBcJ_G0011957.1 mouse_genomes_project 2 178313628 178314643 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010453.1 MGP_BALBcJ_G0008578.1 mouse_genomes_project 2 155178246 155178338 - Gm22759 miRNA miRNA MGP_BALBcJ_T0011481.1 MGP_BALBcJ_G0009606.1 mouse_genomes_project 2 65950332 65950574 + Gm26321 misc_RNA misc_RNA MGP_BALBcJ_T0013405.1 MGP_BALBcJ_G0011502.1 mouse_genomes_project 2 8617969 8619233 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055763.1 MGP_BALBcJ_G0025976.1 mouse_genomes_project 2 85060862 85061807 + MGP_BALBcJ_P0055763 Olfr1120 protein_coding protein_coding MGP_BALBcJ_T0057452.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125524014 125539272 + Stard7 protein_coding processed_transcript MGP_BALBcJ_T0057453.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125524378 125553521 + MGP_BALBcJ_P0057453 Stard7 protein_coding protein_coding MGP_BALBcJ_T0057454.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125524500 125553514 + MGP_BALBcJ_P0057454 Stard7 protein_coding protein_coding MGP_BALBcJ_T0057455.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125538921 125550424 + Stard7 protein_coding retained_intron MGP_BALBcJ_T0057456.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125544728 125551895 + Stard7 protein_coding retained_intron MGP_BALBcJ_T0057457.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125546728 125551920 + Stard7 protein_coding processed_transcript MGP_BALBcJ_T0057458.1 MGP_BALBcJ_G0026431.1 mouse_genomes_project 2 125546730 125551949 + Stard7 protein_coding processed_transcript MGP_BALBcJ_T0013762.1 MGP_BALBcJ_G0011859.1 mouse_genomes_project 2 141649854 141650474 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057836.1 MGP_BALBcJ_G0026520.1 mouse_genomes_project 2 131139539 131212036 + MGP_BALBcJ_P0057836 1110034G24Rik protein_coding protein_coding MGP_BALBcJ_T0057837.1 MGP_BALBcJ_G0026520.1 mouse_genomes_project 2 131142765 131211484 + MGP_BALBcJ_P0057837 1110034G24Rik protein_coding protein_coding MGP_BALBcJ_T0057838.1 MGP_BALBcJ_G0026520.1 mouse_genomes_project 2 131142891 131212036 + MGP_BALBcJ_P0057838 1110034G24Rik protein_coding protein_coding MGP_BALBcJ_T0057839.1 MGP_BALBcJ_G0026520.1 mouse_genomes_project 2 131158319 131211563 + 1110034G24Rik protein_coding processed_transcript MGP_BALBcJ_T0007334.1 MGP_BALBcJ_G0006009.1 mouse_genomes_project 2 149353169 149353807 - Gm28450 lincRNA lincRNA MGP_BALBcJ_T0013451.1 MGP_BALBcJ_G0011548.1 mouse_genomes_project 2 23861354 23862049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004023.1 MGP_BALBcJ_G0003577.1 mouse_genomes_project 2 99962255 99965832 + Gm13920 antisense antisense MGP_BALBcJ_T0055836.1 MGP_BALBcJ_G0026037.1 mouse_genomes_project 2 86600308 86602692 + MGP_BALBcJ_P0055836 Olfr1201 protein_coding protein_coding MGP_BALBcJ_T0007142.1 MGP_BALBcJ_G0005855.1 mouse_genomes_project 2 23315337 23320287 - Gm13553 lincRNA lincRNA MGP_BALBcJ_T0056135.1 MGP_BALBcJ_G0026128.1 mouse_genomes_project 2 89738501 89739941 + MGP_BALBcJ_P0056135 Chrm4 protein_coding protein_coding MGP_BALBcJ_T0003874.1 MGP_BALBcJ_G0003466.1 mouse_genomes_project 2 2002398 2006124 + 4930551O13Rik antisense antisense MGP_BALBcJ_T0059458.1 MGP_BALBcJ_G0026907.1 mouse_genomes_project 2 168616714 168621485 - MGP_BALBcJ_P0059458 Gm11011 protein_coding protein_coding MGP_BALBcJ_T0054661.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46394440 46703666 + MGP_BALBcJ_P0054661 Mbd5 protein_coding protein_coding MGP_BALBcJ_T0054662.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46394450 46557709 + Mbd5 protein_coding processed_transcript MGP_BALBcJ_T0054663.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46394455 46761518 + MGP_BALBcJ_P0054663 Mbd5 protein_coding protein_coding MGP_BALBcJ_T0054664.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46394894 46464806 + Mbd5 protein_coding processed_transcript MGP_BALBcJ_T0054665.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46394895 46399268 + Mbd5 protein_coding processed_transcript MGP_BALBcJ_T0054666.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46394997 46557573 + Mbd5 protein_coding processed_transcript MGP_BALBcJ_T0054667.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46395075 46688831 + Mbd5 protein_coding processed_transcript MGP_BALBcJ_T0054668.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46395081 46502298 + Mbd5 protein_coding processed_transcript MGP_BALBcJ_T0054669.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46689242 46764224 + MGP_BALBcJ_P0054669 Mbd5 protein_coding protein_coding MGP_BALBcJ_T0054670.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46689443 46715186 + MGP_BALBcJ_P0054670 Mbd5 protein_coding protein_coding MGP_BALBcJ_T0054671.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46699669 46761544 + MGP_BALBcJ_P0054671 Mbd5 protein_coding protein_coding MGP_BALBcJ_T0054672.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46715290 46769939 + MGP_BALBcJ_P0054672 Mbd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054673.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46722580 46761198 + MGP_BALBcJ_P0054673 Mbd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054674.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46722581 46761209 + MGP_BALBcJ_P0054674 Mbd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054675.1 MGP_BALBcJ_G0025692.1 mouse_genomes_project 2 46722729 46761432 + MGP_BALBcJ_P0054675 Mbd5 protein_coding protein_coding MGP_BALBcJ_T0052359.1 MGP_BALBcJ_G0025293.1 mouse_genomes_project 2 1986583 2001016 - Optn protein_coding processed_transcript MGP_BALBcJ_T0052360.1 MGP_BALBcJ_G0025293.1 mouse_genomes_project 2 1986583 2032525 - MGP_BALBcJ_P0052360 Optn protein_coding protein_coding MGP_BALBcJ_T0052361.1 MGP_BALBcJ_G0025293.1 mouse_genomes_project 2 1986585 2032418 - MGP_BALBcJ_P0052361 Optn protein_coding protein_coding MGP_BALBcJ_T0052362.1 MGP_BALBcJ_G0025293.1 mouse_genomes_project 2 1987242 2002316 - Optn protein_coding processed_transcript MGP_BALBcJ_T0052363.1 MGP_BALBcJ_G0025293.1 mouse_genomes_project 2 2011142 2032531 - Optn protein_coding processed_transcript MGP_BALBcJ_T0056604.1 MGP_BALBcJ_G0026224.1 mouse_genomes_project 2 109185847 109186786 + MGP_BALBcJ_P0056604 Olfr1276 protein_coding protein_coding MGP_BALBcJ_T0100940.1 MGP_BALBcJ_G0038976.1 mouse_genomes_project 2 30492821 30492958 - Gm23546 snoRNA snoRNA MGP_BALBcJ_T0100964.1 MGP_BALBcJ_G0039000.1 mouse_genomes_project 2 94977126 94977249 + Gm22957 snoRNA snoRNA MGP_BALBcJ_T0007138.1 MGP_BALBcJ_G0005852.1 mouse_genomes_project 2 22684650 22689319 + Gm26702 lincRNA lincRNA MGP_BALBcJ_T0059796.1 MGP_BALBcJ_G0026993.1 mouse_genomes_project 2 180630515 180638542 - MGP_BALBcJ_P0059796 Stmn3 protein_coding protein_coding MGP_BALBcJ_T0053777.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27577397 27598538 + MGP_BALBcJ_P0053777 Fam73b protein_coding protein_coding MGP_BALBcJ_T0053778.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27577409 27581874 + Fam73b protein_coding processed_transcript MGP_BALBcJ_T0053779.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27577418 27592103 + MGP_BALBcJ_P0053779 Fam73b protein_coding protein_coding MGP_BALBcJ_T0053780.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27577430 27582481 + Fam73b protein_coding retained_intron MGP_BALBcJ_T0053781.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27577457 27583582 + MGP_BALBcJ_P0053781 Fam73b protein_coding protein_coding MGP_BALBcJ_T0053782.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27577460 27598536 + MGP_BALBcJ_P0053782 Fam73b protein_coding protein_coding MGP_BALBcJ_T0053783.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27580859 27582482 + Fam73b protein_coding retained_intron MGP_BALBcJ_T0053784.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27581591 27584379 + MGP_BALBcJ_P0053784 Fam73b protein_coding protein_coding MGP_BALBcJ_T0053785.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27584458 27589668 + Fam73b protein_coding retained_intron MGP_BALBcJ_T0053786.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27591243 27595024 + Fam73b protein_coding retained_intron MGP_BALBcJ_T0053787.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27594729 27597117 + MGP_BALBcJ_P0053787 Fam73b protein_coding protein_coding MGP_BALBcJ_T0053788.1 MGP_BALBcJ_G0025540.1 mouse_genomes_project 2 27594960 27597223 + MGP_BALBcJ_P0053788 Fam73b protein_coding protein_coding MGP_BALBcJ_T0057908.1 MGP_BALBcJ_G0026536.1 mouse_genomes_project 2 135342571 135360134 - MGP_BALBcJ_P0057908 Mkks protein_coding protein_coding MGP_BALBcJ_T0057909.1 MGP_BALBcJ_G0026536.1 mouse_genomes_project 2 135342571 135360141 - MGP_BALBcJ_P0057909 Mkks protein_coding protein_coding MGP_BALBcJ_T0057910.1 MGP_BALBcJ_G0026536.1 mouse_genomes_project 2 135350010 135359906 - MGP_BALBcJ_P0057910 Mkks protein_coding protein_coding MGP_BALBcJ_T0054152.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29978954 29984749 - protein_coding retained_intron MGP_BALBcJ_T0054153.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29980638 29986358 - MGP_BALBcJ_P0054153 protein_coding unknown_likely_coding MGP_BALBcJ_T0054154.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29980646 29986712 - MGP_BALBcJ_P0054154 protein_coding unknown_likely_coding MGP_BALBcJ_T0054155.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29981734 29986778 - MGP_BALBcJ_P0054155 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054156.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29981802 29983423 - protein_coding retained_intron MGP_BALBcJ_T0054157.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29983233 29984051 - protein_coding retained_intron MGP_BALBcJ_T0054158.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29983357 29984204 - protein_coding retained_intron MGP_BALBcJ_T0054159.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29983557 29986459 - MGP_BALBcJ_P0054159 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054160.1 MGP_BALBcJ_G0025592.1 mouse_genomes_project 2 29983859 29985955 - MGP_BALBcJ_P0054160 protein_coding protein_coding MGP_BALBcJ_T0056367.1 MGP_BALBcJ_G0026170.1 mouse_genomes_project 2 100934245 100987214 - MGP_BALBcJ_P0056367 Pdhx protein_coding protein_coding MGP_BALBcJ_T0056368.1 MGP_BALBcJ_G0026170.1 mouse_genomes_project 2 100946450 100987036 - MGP_BALBcJ_P0056368 Pdhx protein_coding protein_coding MGP_BALBcJ_T0056369.1 MGP_BALBcJ_G0026170.1 mouse_genomes_project 2 100952628 100987163 - MGP_BALBcJ_P0056369 Pdhx protein_coding protein_coding MGP_BALBcJ_T0054455.1 MGP_BALBcJ_G0025651.1 mouse_genomes_project 2 34154192 34155125 - MGP_BALBcJ_P0054455 Olfr351 protein_coding protein_coding MGP_BALBcJ_T0058007.1 MGP_BALBcJ_G0026562.1 mouse_genomes_project 2 142993691 143051661 - MGP_BALBcJ_P0058007 Dzank1 protein_coding protein_coding MGP_BALBcJ_T0058008.1 MGP_BALBcJ_G0026562.1 mouse_genomes_project 2 142993691 143051677 - MGP_BALBcJ_P0058008 Dzank1 protein_coding protein_coding MGP_BALBcJ_T0058009.1 MGP_BALBcJ_G0026562.1 mouse_genomes_project 2 143033150 143051627 - Dzank1 protein_coding retained_intron MGP_BALBcJ_T0058010.1 MGP_BALBcJ_G0026562.1 mouse_genomes_project 2 143046725 143050911 - Dzank1 protein_coding processed_transcript MGP_BALBcJ_T0058807.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156077716 156089020 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058808.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156077758 156126023 + MGP_BALBcJ_P0058808 Rpn2 protein_coding protein_coding MGP_BALBcJ_T0058809.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156077845 156126023 + MGP_BALBcJ_P0058809 Rpn2 protein_coding protein_coding MGP_BALBcJ_T0058810.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156078125 156125760 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058811.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156078268 156090170 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058812.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156080642 156090051 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058813.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156082667 156125439 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058814.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156094300 156094812 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058815.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156113999 156115657 + Rpn2 protein_coding processed_transcript MGP_BALBcJ_T0058816.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156115625 156122177 + Rpn2 protein_coding retained_intron MGP_BALBcJ_T0058817.1 MGP_BALBcJ_G0026754.1 mouse_genomes_project 2 156119488 156121866 + Rpn2 protein_coding retained_intron MGP_BALBcJ_T0055298.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71001100 71102207 - MGP_BALBcJ_P0055298 Wipf1 protein_coding protein_coding MGP_BALBcJ_T0055299.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71001529 71057266 - MGP_BALBcJ_P0055299 Wipf1 protein_coding protein_coding MGP_BALBcJ_T0055300.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71003637 71025353 - MGP_BALBcJ_P0055300 Wipf1 protein_coding protein_coding MGP_BALBcJ_T0055301.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71008954 71057972 - MGP_BALBcJ_P0055301 Wipf1 protein_coding protein_coding MGP_BALBcJ_T0055302.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71015928 71024084 - MGP_BALBcJ_P0055302 Wipf1 protein_coding protein_coding MGP_BALBcJ_T0055303.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71015988 71101952 - Wipf1 protein_coding processed_transcript MGP_BALBcJ_T0055304.1 MGP_BALBcJ_G0025810.1 mouse_genomes_project 2 71019407 71101855 - Wipf1 protein_coding processed_transcript MGP_BALBcJ_T0057657.1 MGP_BALBcJ_G0026487.1 mouse_genomes_project 2 129009173 129025180 - MGP_BALBcJ_P0057657 Fastkd5 protein_coding protein_coding MGP_BALBcJ_T0057658.1 MGP_BALBcJ_G0026487.1 mouse_genomes_project 2 129009526 129025163 - MGP_BALBcJ_P0057658 Fastkd5 protein_coding protein_coding MGP_BALBcJ_T0013648.1 MGP_BALBcJ_G0011745.1 mouse_genomes_project 2 92436205 92436806 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059753.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391685 180451926 - MGP_BALBcJ_P0059753 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059754.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391685 180452012 - MGP_BALBcJ_P0059754 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059755.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391692 180451839 - MGP_BALBcJ_P0059755 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059756.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391694 180451889 - MGP_BALBcJ_P0059756 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059757.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391694 180451889 - MGP_BALBcJ_P0059757 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059758.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391694 180451889 - MGP_BALBcJ_P0059758 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059759.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180391694 180451889 - MGP_BALBcJ_P0059759 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059760.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180395687 180451973 - MGP_BALBcJ_P0059760 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059761.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180396605 180431112 - MGP_BALBcJ_P0059761 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059762.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180396609 180451634 - MGP_BALBcJ_P0059762 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059763.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180397005 180451843 - MGP_BALBcJ_P0059763 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059764.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180398509 180425855 - MGP_BALBcJ_P0059764 Kcnq2 protein_coding protein_coding MGP_BALBcJ_T0059765.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180398559 180411528 - Kcnq2 protein_coding processed_transcript MGP_BALBcJ_T0059766.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180400688 180416905 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0059767.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180402084 180451889 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0059768.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180412347 180451889 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0059769.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180412572 180451889 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0059770.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180424542 180451889 - Kcnq2 protein_coding processed_transcript MGP_BALBcJ_T0059771.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180424542 180451955 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0059772.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180424542 180451889 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0059773.1 MGP_BALBcJ_G0026985.1 mouse_genomes_project 2 180424542 180451889 - Kcnq2 protein_coding retained_intron MGP_BALBcJ_T0017886.1 MGP_BALBcJ_G0015436.1 mouse_genomes_project 2 173979603 173982164 - Gm14617 processed_transcript retained_intron MGP_BALBcJ_T0017887.1 MGP_BALBcJ_G0015436.1 mouse_genomes_project 2 173979730 173984694 - Gm14617 processed_transcript lincRNA MGP_BALBcJ_T0017888.1 MGP_BALBcJ_G0015436.1 mouse_genomes_project 2 173981586 173984571 - Gm14617 processed_transcript lincRNA MGP_BALBcJ_T0053135.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596625 22600099 - MGP_BALBcJ_P0053135 C8g protein_coding protein_coding MGP_BALBcJ_T0053136.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596625 22598662 - MGP_BALBcJ_P0053136 C8g protein_coding protein_coding MGP_BALBcJ_T0053137.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596630 22598230 - C8g protein_coding processed_transcript MGP_BALBcJ_T0053138.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596630 22597477 - C8g protein_coding processed_transcript MGP_BALBcJ_T0053139.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596630 22598210 - C8g protein_coding processed_transcript MGP_BALBcJ_T0053140.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596632 22598218 - C8g protein_coding processed_transcript MGP_BALBcJ_T0053141.1 MGP_BALBcJ_G0025424.1 mouse_genomes_project 2 22596871 22598089 - C8g protein_coding processed_transcript MGP_BALBcJ_T0056344.1 MGP_BALBcJ_G0026167.1 mouse_genomes_project 2 100461010 100546270 + MGP_BALBcJ_P0056344 Pamr1 protein_coding protein_coding MGP_BALBcJ_T0056345.1 MGP_BALBcJ_G0026167.1 mouse_genomes_project 2 100461147 100538865 + Pamr1 protein_coding retained_intron MGP_BALBcJ_T0056346.1 MGP_BALBcJ_G0026167.1 mouse_genomes_project 2 100539241 100544009 + Pamr1 protein_coding retained_intron MGP_BALBcJ_T0007349.1 MGP_BALBcJ_G0006021.1 mouse_genomes_project 2 156407068 156408805 - Platr27 lincRNA lincRNA MGP_BALBcJ_T0013746.1 MGP_BALBcJ_G0011843.1 mouse_genomes_project 2 131445884 131446884 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004099.1 MGP_BALBcJ_G0003627.1 mouse_genomes_project 2 142853365 142854546 + 1700108N11Rik antisense antisense MGP_BALBcJ_T0055737.1 MGP_BALBcJ_G0025950.1 mouse_genomes_project 2 84321462 84322404 - MGP_BALBcJ_P0055737 Olfr1087 protein_coding protein_coding MGP_BALBcJ_T0017744.1 MGP_BALBcJ_G0015362.1 mouse_genomes_project 2 63866456 63878753 + Gm13630 processed_transcript processed_transcript MGP_BALBcJ_T0007124.1 MGP_BALBcJ_G0005843.1 mouse_genomes_project 2 15882541 15885115 - Carlr lincRNA lincRNA MGP_BALBcJ_T0007230.1 MGP_BALBcJ_G0005926.1 mouse_genomes_project 2 79976981 79993507 - A130030D18Rik lincRNA lincRNA MGP_BALBcJ_T0013616.1 MGP_BALBcJ_G0011713.1 mouse_genomes_project 2 83912100 83915029 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001044.1 MGP_BALBcJ_G0000972.1 mouse_genomes_project 2 11813067 11815435 - TEC TEC MGP_BALBcJ_T0059028.1 MGP_BALBcJ_G0026802.1 mouse_genomes_project 2 162490649 162518198 - MGP_BALBcJ_P0059028 Serinc3 protein_coding protein_coding MGP_BALBcJ_T0059029.1 MGP_BALBcJ_G0026802.1 mouse_genomes_project 2 162504147 162518192 - Serinc3 protein_coding processed_transcript MGP_BALBcJ_T0013673.1 MGP_BALBcJ_G0011770.1 mouse_genomes_project 2 102763395 102764580 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055823.1 MGP_BALBcJ_G0026025.1 mouse_genomes_project 2 86247366 86248278 + MGP_BALBcJ_P0055823 Olfr1183 protein_coding protein_coding MGP_BALBcJ_T0057847.1 MGP_BALBcJ_G0026523.1 mouse_genomes_project 2 131282398 131309943 + MGP_BALBcJ_P0057847 Mcm8 protein_coding protein_coding MGP_BALBcJ_T0057848.1 MGP_BALBcJ_G0026523.1 mouse_genomes_project 2 131282398 131309641 + MGP_BALBcJ_P0057848 Mcm8 protein_coding protein_coding MGP_BALBcJ_T0057849.1 MGP_BALBcJ_G0026523.1 mouse_genomes_project 2 131282481 131284283 + Mcm8 protein_coding processed_transcript MGP_BALBcJ_T0102392.1 MGP_BALBcJ_G0040208.1 mouse_genomes_project 2 34312015 34312959 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010357.1 MGP_BALBcJ_G0008482.1 mouse_genomes_project 2 11338456 11338535 + Mir511 miRNA miRNA MGP_BALBcJ_T0059056.1 MGP_BALBcJ_G0026811.1 mouse_genomes_project 2 162935068 162951840 + MGP_BALBcJ_P0059056 Stk4 protein_coding protein_coding MGP_BALBcJ_T0059057.1 MGP_BALBcJ_G0026811.1 mouse_genomes_project 2 162939418 163022223 + MGP_BALBcJ_P0059057 Stk4 protein_coding protein_coding MGP_BALBcJ_T0059058.1 MGP_BALBcJ_G0026811.1 mouse_genomes_project 2 162946848 162962052 + Stk4 protein_coding processed_transcript MGP_BALBcJ_T0059059.1 MGP_BALBcJ_G0026811.1 mouse_genomes_project 2 162964733 162983406 + MGP_BALBcJ_P0059059 Stk4 protein_coding protein_coding MGP_BALBcJ_T0059060.1 MGP_BALBcJ_G0026811.1 mouse_genomes_project 2 162975231 163022223 + MGP_BALBcJ_P0059060 Stk4 protein_coding protein_coding MGP_BALBcJ_T0004021.1 MGP_BALBcJ_G0003575.1 mouse_genomes_project 2 91239235 91254974 + Gm13807 antisense antisense MGP_BALBcJ_T0059158.1 MGP_BALBcJ_G0026853.1 mouse_genomes_project 2 163726670 163728810 - Spata25 protein_coding processed_transcript MGP_BALBcJ_T0059159.1 MGP_BALBcJ_G0026853.1 mouse_genomes_project 2 163727663 163728819 - MGP_BALBcJ_P0059159 Spata25 protein_coding protein_coding MGP_BALBcJ_T0054468.1 MGP_BALBcJ_G0025663.1 mouse_genomes_project 2 34614752 34615736 + MGP_BALBcJ_P0054468 Olfr368 protein_coding protein_coding MGP_BALBcJ_T0010465.1 MGP_BALBcJ_G0008590.1 mouse_genomes_project 2 167638617 167638681 - Mir7004 miRNA miRNA MGP_BALBcJ_T0053756.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27495010 27553166 + MGP_BALBcJ_P0053756 Nup188 protein_coding protein_coding MGP_BALBcJ_T0053757.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27495010 27516283 + MGP_BALBcJ_P0053757 Nup188 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053758.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27495030 27512643 + Nup188 protein_coding processed_transcript MGP_BALBcJ_T0053759.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27495037 27512361 + MGP_BALBcJ_P0053759 Nup188 protein_coding protein_coding MGP_BALBcJ_T0053760.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27495040 27512360 + MGP_BALBcJ_P0053760 Nup188 protein_coding protein_coding MGP_BALBcJ_T0053761.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27495042 27535592 + Nup188 protein_coding retained_intron MGP_BALBcJ_T0053762.1 MGP_BALBcJ_G0025538.1 mouse_genomes_project 2 27551839 27553045 + Nup188 protein_coding retained_intron MGP_BALBcJ_T0053003.1 MGP_BALBcJ_G0025402.1 mouse_genomes_project 2 22328026 22329197 - MGP_BALBcJ_P0053003 Cysrt1 protein_coding protein_coding MGP_BALBcJ_T0053004.1 MGP_BALBcJ_G0025402.1 mouse_genomes_project 2 22328197 22329106 - MGP_BALBcJ_P0053004 Cysrt1 protein_coding protein_coding MGP_BALBcJ_T0053005.1 MGP_BALBcJ_G0025402.1 mouse_genomes_project 2 22328365 22331691 - MGP_BALBcJ_P0053005 Cysrt1 protein_coding protein_coding MGP_BALBcJ_T0058117.1 MGP_BALBcJ_G0026590.1 mouse_genomes_project 2 147326638 147330551 + MGP_BALBcJ_P0058117 8030411F24Rik protein_coding protein_coding MGP_BALBcJ_T0001074.1 MGP_BALBcJ_G0001002.1 mouse_genomes_project 2 37049712 37053471 + TEC TEC MGP_BALBcJ_T0052275.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367265 403902 + MGP_BALBcJ_P0052275 Dclre1c protein_coding protein_coding MGP_BALBcJ_T0052276.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367265 406921 + MGP_BALBcJ_P0052276 Dclre1c protein_coding protein_coding MGP_BALBcJ_T0052277.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367284 381036 + Dclre1c protein_coding processed_transcript MGP_BALBcJ_T0052278.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367284 396883 + MGP_BALBcJ_P0052278 Dclre1c protein_coding protein_coding MGP_BALBcJ_T0052279.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367299 381074 + Dclre1c protein_coding processed_transcript MGP_BALBcJ_T0052280.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367299 403894 + MGP_BALBcJ_P0052280 Dclre1c protein_coding protein_coding MGP_BALBcJ_T0052281.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 367336 384998 + Dclre1c protein_coding retained_intron MGP_BALBcJ_T0052282.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 383620 401712 + MGP_BALBcJ_P0052282 Dclre1c protein_coding protein_coding MGP_BALBcJ_T0052283.1 MGP_BALBcJ_G0025280.1 mouse_genomes_project 2 395739 396658 + Dclre1c protein_coding processed_transcript MGP_BALBcJ_T0058951.1 MGP_BALBcJ_G0026783.1 mouse_genomes_project 2 159720697 159746985 + MGP_BALBcJ_P0058951 Lpin3 protein_coding protein_coding MGP_BALBcJ_T0058952.1 MGP_BALBcJ_G0026783.1 mouse_genomes_project 2 159728103 159746990 + MGP_BALBcJ_P0058952 Lpin3 protein_coding protein_coding MGP_BALBcJ_T0058953.1 MGP_BALBcJ_G0026783.1 mouse_genomes_project 2 159728103 159746990 + MGP_BALBcJ_P0058953 Lpin3 protein_coding protein_coding MGP_BALBcJ_T0058954.1 MGP_BALBcJ_G0026783.1 mouse_genomes_project 2 159728166 159746780 + MGP_BALBcJ_P0058954 Lpin3 protein_coding protein_coding MGP_BALBcJ_T0058955.1 MGP_BALBcJ_G0026783.1 mouse_genomes_project 2 159742536 159744725 + Lpin3 protein_coding processed_transcript MGP_BALBcJ_T0007368.1 MGP_BALBcJ_G0006040.1 mouse_genomes_project 2 165324453 165341735 - Gm14268 lincRNA lincRNA MGP_BALBcJ_T0007369.1 MGP_BALBcJ_G0006040.1 mouse_genomes_project 2 165324739 165341765 - Gm14268 lincRNA lincRNA MGP_BALBcJ_T0052600.1 MGP_BALBcJ_G0025329.1 mouse_genomes_project 2 10588507 10624208 - MGP_BALBcJ_P0052600 Trdmt1 protein_coding protein_coding MGP_BALBcJ_T0052601.1 MGP_BALBcJ_G0025329.1 mouse_genomes_project 2 10595611 10624190 - Trdmt1 protein_coding processed_transcript MGP_BALBcJ_T0052602.1 MGP_BALBcJ_G0025329.1 mouse_genomes_project 2 10601612 10624203 - MGP_BALBcJ_P0052602 Trdmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003898.1 MGP_BALBcJ_G0003487.1 mouse_genomes_project 2 18444814 18473197 - Gm13327 antisense antisense MGP_BALBcJ_T0013453.1 MGP_BALBcJ_G0011550.1 mouse_genomes_project 2 25968653 25968873 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056044.1 MGP_BALBcJ_G0026115.1 mouse_genomes_project 2 88993524 88998956 + MGP_BALBcJ_P0056044 Acp2 protein_coding protein_coding MGP_BALBcJ_T0056045.1 MGP_BALBcJ_G0026115.1 mouse_genomes_project 2 88993548 89004681 + MGP_BALBcJ_P0056045 Acp2 protein_coding protein_coding MGP_BALBcJ_T0056046.1 MGP_BALBcJ_G0026115.1 mouse_genomes_project 2 88993563 89002723 + Acp2 protein_coding retained_intron MGP_BALBcJ_T0056047.1 MGP_BALBcJ_G0026115.1 mouse_genomes_project 2 88993563 88996689 + MGP_BALBcJ_P0056047 Acp2 protein_coding protein_coding MGP_BALBcJ_T0056048.1 MGP_BALBcJ_G0026115.1 mouse_genomes_project 2 88993567 88994298 + Acp2 protein_coding processed_transcript MGP_BALBcJ_T0056821.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117151389 117160332 + MGP_BALBcJ_P0056821 Rad51 protein_coding protein_coding MGP_BALBcJ_T0056822.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117151403 117173605 + MGP_BALBcJ_P0056822 Rad51 protein_coding protein_coding MGP_BALBcJ_T0056823.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117151410 117169918 + Rad51 protein_coding retained_intron MGP_BALBcJ_T0056824.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117151413 117173353 + MGP_BALBcJ_P0056824 Rad51 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056825.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117157296 117158748 + Rad51 protein_coding retained_intron MGP_BALBcJ_T0056826.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117160288 117184262 + MGP_BALBcJ_P0056826 Rad51 protein_coding protein_coding MGP_BALBcJ_T0056827.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117167828 117170778 + Rad51 protein_coding retained_intron MGP_BALBcJ_T0056828.1 MGP_BALBcJ_G0026305.1 mouse_genomes_project 2 117170484 117171531 + Rad51 protein_coding retained_intron MGP_BALBcJ_T0013805.1 MGP_BALBcJ_G0011902.1 mouse_genomes_project 2 153431674 153431895 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059043.1 MGP_BALBcJ_G0026806.1 mouse_genomes_project 2 162719622 162724913 + MGP_BALBcJ_P0059043 Kcnk15 protein_coding protein_coding MGP_BALBcJ_T0059044.1 MGP_BALBcJ_G0026806.1 mouse_genomes_project 2 162719704 162725717 + MGP_BALBcJ_P0059044 Kcnk15 protein_coding protein_coding MGP_BALBcJ_T0004115.1 MGP_BALBcJ_G0003642.1 mouse_genomes_project 2 153334232 153336914 - Gm14198 antisense antisense MGP_BALBcJ_T0052883.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21668617 21832820 - MGP_BALBcJ_P0052883 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052884.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21668624 21832797 - MGP_BALBcJ_P0052884 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052885.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21671105 21832715 - MGP_BALBcJ_P0052885 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052886.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21671109 21672265 - MGP_BALBcJ_P0052886 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052887.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21671300 21832715 - MGP_BALBcJ_P0052887 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052888.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21671300 21832715 - MGP_BALBcJ_P0052888 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052889.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21672721 21683052 - MGP_BALBcJ_P0052889 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052890.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21674662 21702648 - MGP_BALBcJ_P0052890 Cacna1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052891.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21687589 21696889 - MGP_BALBcJ_P0052891 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0052892.1 MGP_BALBcJ_G0025384.1 mouse_genomes_project 2 21746260 21752629 - MGP_BALBcJ_P0052892 Cacna1b protein_coding protein_coding MGP_BALBcJ_T0003948.1 MGP_BALBcJ_G0003524.1 mouse_genomes_project 2 35623295 35624255 - Gm27197 antisense antisense MGP_BALBcJ_T0052344.1 MGP_BALBcJ_G0025291.1 mouse_genomes_project 2 1939016 1951715 + MGP_BALBcJ_P0052344 Ucma protein_coding protein_coding MGP_BALBcJ_T0052345.1 MGP_BALBcJ_G0025291.1 mouse_genomes_project 2 1939019 1947287 + Ucma protein_coding processed_transcript MGP_BALBcJ_T0052346.1 MGP_BALBcJ_G0025291.1 mouse_genomes_project 2 1939045 1951707 + MGP_BALBcJ_P0052346 Ucma protein_coding protein_coding MGP_BALBcJ_T0052347.1 MGP_BALBcJ_G0025291.1 mouse_genomes_project 2 1939075 1951712 + MGP_BALBcJ_P0052347 Ucma protein_coding protein_coding MGP_BALBcJ_T0052348.1 MGP_BALBcJ_G0025291.1 mouse_genomes_project 2 1939078 1951612 + MGP_BALBcJ_P0052348 Ucma protein_coding protein_coding MGP_BALBcJ_T0013463.1 MGP_BALBcJ_G0011560.1 mouse_genomes_project 2 30605096 30605329 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007144.1 MGP_BALBcJ_G0005857.1 mouse_genomes_project 2 25262792 25295182 + F730016J06Rik lincRNA lincRNA MGP_BALBcJ_T0007145.1 MGP_BALBcJ_G0005857.1 mouse_genomes_project 2 25262798 25281206 + F730016J06Rik lincRNA lincRNA MGP_BALBcJ_T0007146.1 MGP_BALBcJ_G0005857.1 mouse_genomes_project 2 25285561 25292654 + F730016J06Rik lincRNA lincRNA MGP_BALBcJ_T0058734.1 MGP_BALBcJ_G0026740.1 mouse_genomes_project 2 155319703 155340191 + MGP_BALBcJ_P0058734 Aar2 protein_coding protein_coding MGP_BALBcJ_T0058735.1 MGP_BALBcJ_G0026740.1 mouse_genomes_project 2 155319715 155341008 + MGP_BALBcJ_P0058735 Aar2 protein_coding protein_coding MGP_BALBcJ_T0058736.1 MGP_BALBcJ_G0026740.1 mouse_genomes_project 2 155319727 155322820 + Aar2 protein_coding processed_transcript MGP_BALBcJ_T0058737.1 MGP_BALBcJ_G0026740.1 mouse_genomes_project 2 155319729 155323201 + MGP_BALBcJ_P0058737 Aar2 protein_coding protein_coding MGP_BALBcJ_T0058738.1 MGP_BALBcJ_G0026740.1 mouse_genomes_project 2 155319743 155322954 + MGP_BALBcJ_P0058738 Aar2 protein_coding protein_coding MGP_BALBcJ_T0055729.1 MGP_BALBcJ_G0025943.1 mouse_genomes_project 2 84027071 84029321 - MGP_BALBcJ_P0055729 Olfr1058 protein_coding protein_coding MGP_BALBcJ_T0053034.1 MGP_BALBcJ_G0025409.1 mouse_genomes_project 2 22378625 22379668 + MGP_BALBcJ_P0053034 Tmem210 protein_coding protein_coding MGP_BALBcJ_T0053035.1 MGP_BALBcJ_G0025409.1 mouse_genomes_project 2 22378681 22379670 + Tmem210 protein_coding processed_transcript MGP_BALBcJ_T0013773.1 MGP_BALBcJ_G0011870.1 mouse_genomes_project 2 144027365 144027829 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057219.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119954420 120033281 + MGP_BALBcJ_P0057219 Casc4 protein_coding protein_coding MGP_BALBcJ_T0057220.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119954420 120033281 + MGP_BALBcJ_P0057220 Casc4 protein_coding protein_coding MGP_BALBcJ_T0057221.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119954579 119997391 + Casc4 protein_coding retained_intron MGP_BALBcJ_T0057222.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119954580 120003098 + Casc4 protein_coding retained_intron MGP_BALBcJ_T0057223.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119954580 120033166 + MGP_BALBcJ_P0057223 Casc4 protein_coding protein_coding MGP_BALBcJ_T0057224.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119954580 120033128 + MGP_BALBcJ_P0057224 Casc4 protein_coding protein_coding MGP_BALBcJ_T0057225.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119955155 120030770 + Casc4 protein_coding processed_transcript MGP_BALBcJ_T0057226.1 MGP_BALBcJ_G0026373.1 mouse_genomes_project 2 119995988 120030735 + MGP_BALBcJ_P0057226 Casc4 protein_coding protein_coding MGP_BALBcJ_T0017850.1 MGP_BALBcJ_G0015419.1 mouse_genomes_project 2 151957600 151962572 - 2500004C02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017851.1 MGP_BALBcJ_G0015419.1 mouse_genomes_project 2 151958959 151959666 - 2500004C02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017852.1 MGP_BALBcJ_G0015419.1 mouse_genomes_project 2 151959079 151962835 - 2500004C02Rik processed_transcript processed_transcript MGP_BALBcJ_T0055820.1 MGP_BALBcJ_G0026022.1 mouse_genomes_project 2 86176863 86177787 - MGP_BALBcJ_P0055820 Olfr1179 protein_coding protein_coding MGP_BALBcJ_T0007326.1 MGP_BALBcJ_G0006004.1 mouse_genomes_project 2 146257946 146264841 + A530006G24Rik lincRNA lincRNA MGP_BALBcJ_T0059130.1 MGP_BALBcJ_G0026844.1 mouse_genomes_project 2 163609923 163612621 + MGP_BALBcJ_P0059130 Spint5 protein_coding protein_coding MGP_BALBcJ_T0059131.1 MGP_BALBcJ_G0026844.1 mouse_genomes_project 2 163609923 163612621 + MGP_BALBcJ_P0059131 Spint5 protein_coding protein_coding MGP_BALBcJ_T0054746.1 MGP_BALBcJ_G0025707.1 mouse_genomes_project 2 50135056 50185321 - MGP_BALBcJ_P0054746 Stam2 protein_coding protein_coding MGP_BALBcJ_T0054747.1 MGP_BALBcJ_G0025707.1 mouse_genomes_project 2 50140462 50185402 - MGP_BALBcJ_P0054747 Stam2 protein_coding protein_coding MGP_BALBcJ_T0054748.1 MGP_BALBcJ_G0025707.1 mouse_genomes_project 2 50150357 50185301 - Stam2 protein_coding retained_intron MGP_BALBcJ_T0054749.1 MGP_BALBcJ_G0025707.1 mouse_genomes_project 2 50150639 50185311 - MGP_BALBcJ_P0054749 Stam2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054750.1 MGP_BALBcJ_G0025707.1 mouse_genomes_project 2 50161301 50185277 - MGP_BALBcJ_P0054750 Stam2 protein_coding protein_coding MGP_BALBcJ_T0056588.1 MGP_BALBcJ_G0026217.1 mouse_genomes_project 2 108524807 108582670 + MGP_BALBcJ_P0056588 Slc5a12 protein_coding protein_coding MGP_BALBcJ_T0056589.1 MGP_BALBcJ_G0026217.1 mouse_genomes_project 2 108524816 108582680 + MGP_BALBcJ_P0056589 Slc5a12 protein_coding protein_coding MGP_BALBcJ_T0056590.1 MGP_BALBcJ_G0026217.1 mouse_genomes_project 2 108524928 108557587 + Slc5a12 protein_coding retained_intron MGP_BALBcJ_T0056591.1 MGP_BALBcJ_G0026217.1 mouse_genomes_project 2 108525233 108538756 + Slc5a12 protein_coding processed_transcript MGP_BALBcJ_T0056592.1 MGP_BALBcJ_G0026217.1 mouse_genomes_project 2 108538690 108581485 + Slc5a12 protein_coding processed_transcript MGP_BALBcJ_T0004120.1 MGP_BALBcJ_G0003646.1 mouse_genomes_project 2 154352611 154353522 - Gm14257 antisense antisense MGP_BALBcJ_T0057854.1 MGP_BALBcJ_G0026525.1 mouse_genomes_project 2 131335360 131347951 - MGP_BALBcJ_P0057854 Lrrn4 protein_coding protein_coding MGP_BALBcJ_T0059345.1 MGP_BALBcJ_G0026883.1 mouse_genomes_project 2 165989382 166015920 - MGP_BALBcJ_P0059345 Znfx1 protein_coding protein_coding MGP_BALBcJ_T0059346.1 MGP_BALBcJ_G0026883.1 mouse_genomes_project 2 165989388 165997085 - MGP_BALBcJ_P0059346 Znfx1 protein_coding protein_coding MGP_BALBcJ_T0059347.1 MGP_BALBcJ_G0026883.1 mouse_genomes_project 2 165997615 166013331 - MGP_BALBcJ_P0059347 Znfx1 protein_coding protein_coding MGP_BALBcJ_T0059348.1 MGP_BALBcJ_G0026883.1 mouse_genomes_project 2 165997700 166015622 - MGP_BALBcJ_P0059348 Znfx1 protein_coding protein_coding MGP_BALBcJ_T0059349.1 MGP_BALBcJ_G0026883.1 mouse_genomes_project 2 166002668 166015545 - Znfx1 protein_coding retained_intron MGP_BALBcJ_T0010449.1 MGP_BALBcJ_G0008574.1 mouse_genomes_project 2 151377815 151377900 - Gm23802 miRNA miRNA MGP_BALBcJ_T0007262.1 MGP_BALBcJ_G0005951.1 mouse_genomes_project 2 103431178 103432035 + 4930527A07Rik lincRNA lincRNA MGP_BALBcJ_T0100927.1 MGP_BALBcJ_G0038963.1 mouse_genomes_project 2 19913979 19914099 + Gm25544 snoRNA snoRNA MGP_BALBcJ_T0054443.1 MGP_BALBcJ_G0025640.1 mouse_genomes_project 2 33742697 33743636 + MGP_BALBcJ_P0054443 Olfr340 protein_coding protein_coding MGP_BALBcJ_T0099666.1 MGP_BALBcJ_G0037702.1 mouse_genomes_project 2 25768802 25768906 + Gm22675 snRNA snRNA MGP_BALBcJ_T0058818.1 MGP_BALBcJ_G0026755.1 mouse_genomes_project 2 156129200 156147047 - Ghrh protein_coding processed_transcript MGP_BALBcJ_T0058819.1 MGP_BALBcJ_G0026755.1 mouse_genomes_project 2 156129200 156146186 - MGP_BALBcJ_P0058819 Ghrh protein_coding protein_coding MGP_BALBcJ_T0058820.1 MGP_BALBcJ_G0026755.1 mouse_genomes_project 2 156129200 156137089 - MGP_BALBcJ_P0058820 Ghrh protein_coding protein_coding MGP_BALBcJ_T0007408.1 MGP_BALBcJ_G0006073.1 mouse_genomes_project 2 179675265 179690493 - B230312C02Rik lincRNA lincRNA MGP_BALBcJ_T0058343.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151773107 151817953 + Tm9sf4 protein_coding processed_transcript MGP_BALBcJ_T0058344.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151773107 151824131 + MGP_BALBcJ_P0058344 Tm9sf4 protein_coding protein_coding MGP_BALBcJ_T0058345.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151773345 151802418 + Tm9sf4 protein_coding processed_transcript MGP_BALBcJ_T0058346.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151773352 151806889 + Tm9sf4 protein_coding retained_intron MGP_BALBcJ_T0058347.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151803752 151805541 + Tm9sf4 protein_coding retained_intron MGP_BALBcJ_T0058348.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151804279 151814126 + Tm9sf4 protein_coding processed_transcript MGP_BALBcJ_T0058349.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151807694 151816993 + Tm9sf4 protein_coding processed_transcript MGP_BALBcJ_T0058350.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151808883 151812280 + Tm9sf4 protein_coding processed_transcript MGP_BALBcJ_T0058351.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151813612 151824131 + Tm9sf4 protein_coding retained_intron MGP_BALBcJ_T0058352.1 MGP_BALBcJ_G0026663.1 mouse_genomes_project 2 151815233 151824131 + Tm9sf4 protein_coding retained_intron MGP_BALBcJ_T0013457.1 MGP_BALBcJ_G0011554.1 mouse_genomes_project 2 28799767 28800562 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053260.1 MGP_BALBcJ_G0025453.1 mouse_genomes_project 2 23375555 23424495 - MGP_BALBcJ_P0053260 Ccdc187 protein_coding unknown_likely_coding MGP_BALBcJ_T0053262.1 MGP_BALBcJ_G0025453.1 mouse_genomes_project 2 23401398 23424669 - MGP_BALBcJ_P0053262 Ccdc187 protein_coding protein_coding MGP_BALBcJ_T0053263.1 MGP_BALBcJ_G0025453.1 mouse_genomes_project 2 23410929 23418015 - MGP_BALBcJ_P0053263 Ccdc187 protein_coding protein_coding MGP_BALBcJ_T0058906.1 MGP_BALBcJ_G0026774.1 mouse_genomes_project 2 157492397 157588924 + Ppp1r16b protein_coding retained_intron MGP_BALBcJ_T0058907.1 MGP_BALBcJ_G0026774.1 mouse_genomes_project 2 157492397 157595824 + MGP_BALBcJ_P0058907 Ppp1r16b protein_coding protein_coding MGP_BALBcJ_T0058908.1 MGP_BALBcJ_G0026774.1 mouse_genomes_project 2 157493732 157595824 + MGP_BALBcJ_P0058908 Ppp1r16b protein_coding protein_coding MGP_BALBcJ_T0058909.1 MGP_BALBcJ_G0026774.1 mouse_genomes_project 2 157494118 157595824 + MGP_BALBcJ_P0058909 Ppp1r16b protein_coding protein_coding MGP_BALBcJ_T0058910.1 MGP_BALBcJ_G0026774.1 mouse_genomes_project 2 157523111 157595824 + MGP_BALBcJ_P0058910 Ppp1r16b protein_coding protein_coding MGP_BALBcJ_T0059708.1 MGP_BALBcJ_G0026976.1 mouse_genomes_project 2 180017419 180025771 + MGP_BALBcJ_P0059708 Gid8 protein_coding protein_coding MGP_BALBcJ_T0059709.1 MGP_BALBcJ_G0026976.1 mouse_genomes_project 2 180018985 180022038 + Gid8 protein_coding processed_transcript MGP_BALBcJ_T0059710.1 MGP_BALBcJ_G0026976.1 mouse_genomes_project 2 180019844 180025768 + MGP_BALBcJ_P0059710 Gid8 protein_coding protein_coding MGP_BALBcJ_T0013749.1 MGP_BALBcJ_G0011846.1 mouse_genomes_project 2 133192634 133192947 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007264.1 MGP_BALBcJ_G0005953.1 mouse_genomes_project 2 103989623 103991645 - Gm29053 lincRNA lincRNA MGP_BALBcJ_T0013452.1 MGP_BALBcJ_G0011549.1 mouse_genomes_project 2 24178873 24179751 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057253.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120408000 120412660 - MGP_BALBcJ_P0057253 Duoxa1 protein_coding protein_coding MGP_BALBcJ_T0057254.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120409360 120419405 - MGP_BALBcJ_P0057254 Duoxa1 protein_coding protein_coding MGP_BALBcJ_T0057255.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120409363 120411523 - Duoxa1 protein_coding processed_transcript MGP_BALBcJ_T0057256.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120409556 120412638 - MGP_BALBcJ_P0057256 Duoxa1 protein_coding protein_coding MGP_BALBcJ_T0057257.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120410580 120419442 - MGP_BALBcJ_P0057257 Duoxa1 protein_coding protein_coding MGP_BALBcJ_T0057258.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120411026 120419356 - MGP_BALBcJ_P0057258 Duoxa1 protein_coding protein_coding MGP_BALBcJ_T0057259.1 MGP_BALBcJ_G0026386.1 mouse_genomes_project 2 120411405 120419363 - MGP_BALBcJ_P0057259 Duoxa1 protein_coding protein_coding MGP_BALBcJ_T0013815.1 MGP_BALBcJ_G0011912.1 mouse_genomes_project 2 155150411 155150893 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055889.1 MGP_BALBcJ_G0026079.1 mouse_genomes_project 2 87453856 87456790 - MGP_BALBcJ_P0055889 Olfr1250 protein_coding protein_coding MGP_BALBcJ_T0052962.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22165768 22167580 + Entpd8 protein_coding retained_intron MGP_BALBcJ_T0052963.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22165786 22171181 + MGP_BALBcJ_P0052963 Entpd8 protein_coding protein_coding MGP_BALBcJ_T0052964.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22165789 22171181 + MGP_BALBcJ_P0052964 Entpd8 protein_coding protein_coding MGP_BALBcJ_T0052965.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22165973 22171180 + Entpd8 protein_coding retained_intron MGP_BALBcJ_T0052966.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22167275 22170617 + Entpd8 protein_coding retained_intron MGP_BALBcJ_T0052967.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22167282 22171181 + MGP_BALBcJ_P0052967 Entpd8 protein_coding protein_coding MGP_BALBcJ_T0052968.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22167497 22169199 + MGP_BALBcJ_P0052968 Entpd8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052969.1 MGP_BALBcJ_G0025392.1 mouse_genomes_project 2 22170141 22171039 + Entpd8 protein_coding retained_intron MGP_BALBcJ_T0058146.1 MGP_BALBcJ_G0026603.1 mouse_genomes_project 2 149195479 149204009 + MGP_BALBcJ_P0058146 Cst7 protein_coding protein_coding MGP_BALBcJ_T0059360.1 MGP_BALBcJ_G0026887.1 mouse_genomes_project 2 166253748 166304758 - MGP_BALBcJ_P0059360 B4galt5 protein_coding protein_coding MGP_BALBcJ_T0059361.1 MGP_BALBcJ_G0026887.1 mouse_genomes_project 2 166256503 166261005 - MGP_BALBcJ_P0059361 B4galt5 protein_coding protein_coding MGP_BALBcJ_T0059362.1 MGP_BALBcJ_G0026887.1 mouse_genomes_project 2 166262916 166269162 - B4galt5 protein_coding processed_transcript MGP_BALBcJ_T0059363.1 MGP_BALBcJ_G0026887.1 mouse_genomes_project 2 166262916 166269207 - B4galt5 protein_coding processed_transcript MGP_BALBcJ_T0054533.1 MGP_BALBcJ_G0025676.1 mouse_genomes_project 2 35971791 35989511 - MGP_BALBcJ_P0054533 Nr5a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0054534.1 MGP_BALBcJ_G0025676.1 mouse_genomes_project 2 35979097 35988950 - Nr5a1 protein_coding retained_intron MGP_BALBcJ_T0055762.1 MGP_BALBcJ_G0025975.1 mouse_genomes_project 2 85013222 85014146 + MGP_BALBcJ_P0055762 Olfr1118 protein_coding protein_coding MGP_BALBcJ_T0054646.1 MGP_BALBcJ_G0025690.1 mouse_genomes_project 2 46256724 46344608 + MGP_BALBcJ_P0054646 Acvr2a protein_coding protein_coding MGP_BALBcJ_T0054647.1 MGP_BALBcJ_G0025690.1 mouse_genomes_project 2 46331727 46341587 + Acvr2a protein_coding processed_transcript MGP_BALBcJ_T0058198.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133332 150152542 + MGP_BALBcJ_P0058198 Fkbp1a protein_coding protein_coding MGP_BALBcJ_T0058199.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133434 150151678 + Fkbp1a protein_coding processed_transcript MGP_BALBcJ_T0058200.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133443 150150470 + Fkbp1a protein_coding processed_transcript MGP_BALBcJ_T0058201.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133443 150135527 + Fkbp1a protein_coding retained_intron MGP_BALBcJ_T0058202.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133464 150150678 + Fkbp1a protein_coding retained_intron MGP_BALBcJ_T0058203.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133470 150151792 + Fkbp1a protein_coding processed_transcript MGP_BALBcJ_T0058204.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133545 150148325 + Fkbp1a protein_coding processed_transcript MGP_BALBcJ_T0058205.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150133586 150151503 + Fkbp1a protein_coding processed_transcript MGP_BALBcJ_T0058206.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150134748 150152540 + MGP_BALBcJ_P0058206 Fkbp1a protein_coding protein_coding MGP_BALBcJ_T0058207.1 MGP_BALBcJ_G0026615.1 mouse_genomes_project 2 150136259 150151563 + Fkbp1a protein_coding processed_transcript MGP_BALBcJ_T0010411.1 MGP_BALBcJ_G0008536.1 mouse_genomes_project 2 82260018 82260082 - Mir130a miRNA miRNA MGP_BALBcJ_T0017885.1 MGP_BALBcJ_G0015435.1 mouse_genomes_project 2 172129472 172129925 - Gm20490 processed_transcript processed_transcript MGP_BALBcJ_T0058116.1 MGP_BALBcJ_G0026589.1 mouse_genomes_project 2 147313656 147316610 - MGP_BALBcJ_P0058116 Cst11 protein_coding protein_coding MGP_BALBcJ_T0100941.1 MGP_BALBcJ_G0038977.1 mouse_genomes_project 2 34680468 34680579 - Snord90 snoRNA snoRNA MGP_BALBcJ_T0059573.1 MGP_BALBcJ_G0026941.1 mouse_genomes_project 2 173456362 173473029 - MGP_BALBcJ_P0059573 Gm20721 protein_coding protein_coding MGP_BALBcJ_T0013655.1 MGP_BALBcJ_G0011752.1 mouse_genomes_project 2 96477420 96477745 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007219.1 MGP_BALBcJ_G0005917.1 mouse_genomes_project 2 72722414 72752950 - A330043C09Rik lincRNA lincRNA MGP_BALBcJ_T0013620.1 MGP_BALBcJ_G0011717.1 mouse_genomes_project 2 84906363 84922761 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052659.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14408851 14793241 - MGP_BALBcJ_P0052659 protein_coding protein_coding MGP_BALBcJ_T0052660.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14408996 14526739 - MGP_BALBcJ_P0052660 protein_coding protein_coding MGP_BALBcJ_T0052661.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14413636 14424935 - protein_coding processed_transcript MGP_BALBcJ_T0052662.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14413636 14528504 - MGP_BALBcJ_P0052662 protein_coding unknown_likely_coding MGP_BALBcJ_T0052663.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14415697 14591952 - MGP_BALBcJ_P0052663 protein_coding protein_coding MGP_BALBcJ_T0052664.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14439105 14453153 - protein_coding processed_transcript MGP_BALBcJ_T0052665.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14440723 14453196 - protein_coding processed_transcript MGP_BALBcJ_T0052666.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14440980 14453222 - MGP_BALBcJ_P0052666 protein_coding protein_coding MGP_BALBcJ_T0052667.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14443700 14453183 - protein_coding processed_transcript MGP_BALBcJ_T0052668.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14455116 14528594 - MGP_BALBcJ_P0052668 protein_coding protein_coding MGP_BALBcJ_T0052669.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14455119 14528596 - MGP_BALBcJ_P0052669 protein_coding protein_coding MGP_BALBcJ_T0052670.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14459205 14526428 - MGP_BALBcJ_P0052670 protein_coding protein_coding MGP_BALBcJ_T0052671.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14497558 14590296 - protein_coding processed_transcript MGP_BALBcJ_T0052672.1 MGP_BALBcJ_G0025342.1 mouse_genomes_project 2 14789583 14793662 - protein_coding processed_transcript MGP_BALBcJ_T0010415.1 MGP_BALBcJ_G0008540.1 mouse_genomes_project 2 90205382 90205445 - Mir7000 miRNA miRNA MGP_BALBcJ_T0058510.1 MGP_BALBcJ_G0026707.1 mouse_genomes_project 2 154027185 154050232 - Pigu protein_coding processed_transcript MGP_BALBcJ_T0058511.1 MGP_BALBcJ_G0026707.1 mouse_genomes_project 2 154027185 154107731 - MGP_BALBcJ_P0058511 Pigu protein_coding protein_coding MGP_BALBcJ_T0058512.1 MGP_BALBcJ_G0026707.1 mouse_genomes_project 2 154027186 154107725 - MGP_BALBcJ_P0058512 Pigu protein_coding protein_coding MGP_BALBcJ_T0058513.1 MGP_BALBcJ_G0026707.1 mouse_genomes_project 2 154050195 154053569 - Pigu protein_coding processed_transcript MGP_BALBcJ_T0058514.1 MGP_BALBcJ_G0026707.1 mouse_genomes_project 2 154082860 154107720 - Pigu protein_coding retained_intron MGP_BALBcJ_T0052409.1 MGP_BALBcJ_G0025304.1 mouse_genomes_project 2 3302786 3426919 + MGP_BALBcJ_P0052409 Usp6nl protein_coding protein_coding MGP_BALBcJ_T0052410.1 MGP_BALBcJ_G0025304.1 mouse_genomes_project 2 3302891 3401541 + Usp6nl protein_coding processed_transcript MGP_BALBcJ_T0052411.1 MGP_BALBcJ_G0025304.1 mouse_genomes_project 2 3331406 3424023 + MGP_BALBcJ_P0052411 Usp6nl protein_coding protein_coding MGP_BALBcJ_T0052412.1 MGP_BALBcJ_G0025304.1 mouse_genomes_project 2 3401450 3405364 + Usp6nl protein_coding processed_transcript MGP_BALBcJ_T0100990.1 MGP_BALBcJ_G0039026.1 mouse_genomes_project 2 149509129 149509273 + Gm23598 snoRNA snoRNA MGP_BALBcJ_T0055598.1 MGP_BALBcJ_G0025873.1 mouse_genomes_project 2 82172685 82175049 + Btbd18 protein_coding processed_transcript MGP_BALBcJ_T0055599.1 MGP_BALBcJ_G0025873.1 mouse_genomes_project 2 82173152 82184593 + MGP_BALBcJ_P0055599 Btbd18 protein_coding protein_coding MGP_BALBcJ_T0058130.1 MGP_BALBcJ_G0026597.1 mouse_genomes_project 2 147985698 147989187 + MGP_BALBcJ_P0058130 Cst10 protein_coding protein_coding MGP_BALBcJ_T0058131.1 MGP_BALBcJ_G0026597.1 mouse_genomes_project 2 147985890 147989187 + MGP_BALBcJ_P0058131 Cst10 protein_coding protein_coding MGP_BALBcJ_T0058132.1 MGP_BALBcJ_G0026597.1 mouse_genomes_project 2 147985974 147989187 + MGP_BALBcJ_P0058132 Cst10 protein_coding protein_coding MGP_BALBcJ_T0057917.1 MGP_BALBcJ_G0026538.1 mouse_genomes_project 2 135545993 135581397 - MGP_BALBcJ_P0057917 Jag1 protein_coding protein_coding MGP_BALBcJ_T0057918.1 MGP_BALBcJ_G0026538.1 mouse_genomes_project 2 135547300 135550359 - Jag1 protein_coding retained_intron MGP_BALBcJ_T0007287.1 MGP_BALBcJ_G0005971.1 mouse_genomes_project 2 115826603 115828152 - Gm28183 lincRNA lincRNA MGP_BALBcJ_T0102413.1 MGP_BALBcJ_G0040229.1 mouse_genomes_project 2 84648422 84649361 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0054550.1 MGP_BALBcJ_G0025680.1 mouse_genomes_project 2 36310894 36314932 - MGP_BALBcJ_P0054550 Rpl35 protein_coding protein_coding MGP_BALBcJ_T0054551.1 MGP_BALBcJ_G0025680.1 mouse_genomes_project 2 36310933 36314351 - Rpl35 protein_coding processed_transcript MGP_BALBcJ_T0054552.1 MGP_BALBcJ_G0025680.1 mouse_genomes_project 2 36313919 36314430 - Rpl35 protein_coding processed_transcript MGP_BALBcJ_T0057850.1 MGP_BALBcJ_G0026524.1 mouse_genomes_project 2 131312829 131331191 + MGP_BALBcJ_P0057850 Crls1 protein_coding protein_coding MGP_BALBcJ_T0057851.1 MGP_BALBcJ_G0026524.1 mouse_genomes_project 2 131312841 131333841 + MGP_BALBcJ_P0057851 Crls1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057852.1 MGP_BALBcJ_G0026524.1 mouse_genomes_project 2 131312970 131333836 + MGP_BALBcJ_P0057852 Crls1 protein_coding protein_coding MGP_BALBcJ_T0057853.1 MGP_BALBcJ_G0026524.1 mouse_genomes_project 2 131313891 131332943 + MGP_BALBcJ_P0057853 Crls1 protein_coding protein_coding MGP_BALBcJ_T0058576.1 MGP_BALBcJ_G0026719.1 mouse_genomes_project 2 154574681 154576369 - MGP_BALBcJ_P0058576 BC029722 protein_coding protein_coding MGP_BALBcJ_T0055880.1 MGP_BALBcJ_G0026073.1 mouse_genomes_project 2 87318366 87320027 - MGP_BALBcJ_P0055880 Olfr1243 protein_coding protein_coding MGP_BALBcJ_T0055881.1 MGP_BALBcJ_G0026073.1 mouse_genomes_project 2 87319683 87322683 - Olfr1243 protein_coding processed_transcript MGP_BALBcJ_T0059949.1 MGP_BALBcJ_G0027014.1 mouse_genomes_project 2 181231615 181233911 + MGP_BALBcJ_P0059949 protein_coding protein_coding MGP_BALBcJ_T0053315.1 MGP_BALBcJ_G0025461.1 mouse_genomes_project 2 23522502 23525494 - MGP_BALBcJ_P0053315 Inpp5e protein_coding protein_coding MGP_BALBcJ_T0053316.1 MGP_BALBcJ_G0025461.1 mouse_genomes_project 2 23523040 23535392 - Inpp5e protein_coding processed_transcript MGP_BALBcJ_T0053317.1 MGP_BALBcJ_G0025461.1 mouse_genomes_project 2 23523283 23535411 - Inpp5e protein_coding processed_transcript MGP_BALBcJ_T0053318.1 MGP_BALBcJ_G0025461.1 mouse_genomes_project 2 23523825 23534795 - MGP_BALBcJ_P0053318 Inpp5e protein_coding protein_coding MGP_BALBcJ_T0053319.1 MGP_BALBcJ_G0025461.1 mouse_genomes_project 2 23525282 23526499 - Inpp5e protein_coding processed_transcript MGP_BALBcJ_T0053320.1 MGP_BALBcJ_G0025461.1 mouse_genomes_project 2 23525435 23528229 - MGP_BALBcJ_P0053320 Inpp5e protein_coding protein_coding MGP_BALBcJ_T0013848.1 MGP_BALBcJ_G0011945.1 mouse_genomes_project 2 166495870 166496147 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011505.1 MGP_BALBcJ_G0009630.1 mouse_genomes_project 2 173420555 173420677 + Gm27869 misc_RNA misc_RNA MGP_BALBcJ_T0054377.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32560446 32611971 + MGP_BALBcJ_P0054377 Gsn protein_coding protein_coding MGP_BALBcJ_T0054378.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32560450 32607332 + MGP_BALBcJ_P0054378 Gsn protein_coding protein_coding MGP_BALBcJ_T0054379.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32560462 32597650 + MGP_BALBcJ_P0054379 Gsn protein_coding protein_coding MGP_BALBcJ_T0054380.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32560475 32597648 + MGP_BALBcJ_P0054380 Gsn protein_coding protein_coding MGP_BALBcJ_T0054381.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32560515 32594528 + MGP_BALBcJ_P0054381 Gsn protein_coding protein_coding MGP_BALBcJ_T0054382.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32586460 32611973 + MGP_BALBcJ_P0054382 Gsn protein_coding protein_coding MGP_BALBcJ_T0054383.1 MGP_BALBcJ_G0025625.1 mouse_genomes_project 2 32586593 32589106 + Gsn protein_coding retained_intron MGP_BALBcJ_T0099700.1 MGP_BALBcJ_G0037736.1 mouse_genomes_project 2 131177611 131177714 + Gm22245 snRNA snRNA MGP_BALBcJ_T0059386.1 MGP_BALBcJ_G0026891.1 mouse_genomes_project 2 166499418 166504937 + MGP_BALBcJ_P0059386 Snai1 protein_coding protein_coding MGP_BALBcJ_T0057982.1 MGP_BALBcJ_G0026556.1 mouse_genomes_project 2 142555008 142596738 + MGP_BALBcJ_P0057982 Banf2 protein_coding protein_coding MGP_BALBcJ_T0057983.1 MGP_BALBcJ_G0026556.1 mouse_genomes_project 2 142555051 142596738 + MGP_BALBcJ_P0057983 Banf2 protein_coding protein_coding MGP_BALBcJ_T0004010.1 MGP_BALBcJ_G0003567.1 mouse_genomes_project 2 74304624 74368713 + Gm13938 antisense antisense MGP_BALBcJ_T0054716.1 MGP_BALBcJ_G0025702.1 mouse_genomes_project 2 49466102 49484744 + MGP_BALBcJ_P0054716 Tnfaip6 protein_coding protein_coding MGP_BALBcJ_T0013443.1 MGP_BALBcJ_G0011540.1 mouse_genomes_project 2 21232450 21233934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055498.1 MGP_BALBcJ_G0025851.1 mouse_genomes_project 2 77033378 77037608 - MGP_BALBcJ_P0055498 Neurod1 protein_coding protein_coding MGP_BALBcJ_T0013442.1 MGP_BALBcJ_G0011539.1 mouse_genomes_project 2 20713918 20714822 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058646.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154837788 154877893 - MGP_BALBcJ_P0058646 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058647.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154837791 154877846 - Cpne1 protein_coding retained_intron MGP_BALBcJ_T0058648.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154837791 154877897 - MGP_BALBcJ_P0058648 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058651.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154837793 154877901 - MGP_BALBcJ_P0058651 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058652.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154839284 154840247 - Cpne1 protein_coding processed_transcript MGP_BALBcJ_T0058653.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154839306 154877859 - MGP_BALBcJ_P0058653 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058654.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154839340 154842204 - MGP_BALBcJ_P0058654 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058655.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154839345 154842229 - Cpne1 protein_coding retained_intron MGP_BALBcJ_T0058656.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154839459 154877862 - MGP_BALBcJ_P0058656 Cpne1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058657.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154839464 154844112 - MGP_BALBcJ_P0058657 Cpne1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058658.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154840049 154842504 - Cpne1 protein_coding retained_intron MGP_BALBcJ_T0058659.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154840152 154877923 - MGP_BALBcJ_P0058659 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058660.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154843350 154877867 - MGP_BALBcJ_P0058660 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058661.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154843371 154844543 - Cpne1 protein_coding retained_intron MGP_BALBcJ_T0058662.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154844118 154877917 - MGP_BALBcJ_P0058662 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058663.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154844525 154877867 - MGP_BALBcJ_P0058663 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058664.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154844851 154877821 - MGP_BALBcJ_P0058664 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0058665.1 MGP_BALBcJ_G0026730.1 mouse_genomes_project 2 154844862 154868605 - MGP_BALBcJ_P0058665 Cpne1 protein_coding protein_coding MGP_BALBcJ_T0056204.1 MGP_BALBcJ_G0026138.1 mouse_genomes_project 2 90222713 90253091 - MGP_BALBcJ_P0056204 Cry2 protein_coding protein_coding MGP_BALBcJ_T0056205.1 MGP_BALBcJ_G0026138.1 mouse_genomes_project 2 90230327 90253084 - MGP_BALBcJ_P0056205 Cry2 protein_coding protein_coding MGP_BALBcJ_T0056206.1 MGP_BALBcJ_G0026138.1 mouse_genomes_project 2 90244221 90253084 - Cry2 protein_coding processed_transcript MGP_BALBcJ_T0056207.1 MGP_BALBcJ_G0026138.1 mouse_genomes_project 2 90245971 90251440 - Cry2 protein_coding processed_transcript MGP_BALBcJ_T0059640.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179397116 179402140 - MGP_BALBcJ_P0059640 Hrh3 protein_coding protein_coding MGP_BALBcJ_T0059641.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179397302 179401803 - MGP_BALBcJ_P0059641 Hrh3 protein_coding protein_coding MGP_BALBcJ_T0059642.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179397529 179401803 - MGP_BALBcJ_P0059642 Hrh3 protein_coding protein_coding MGP_BALBcJ_T0059643.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179397529 179401803 - MGP_BALBcJ_P0059643 Hrh3 protein_coding protein_coding MGP_BALBcJ_T0059644.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179397930 179401826 - MGP_BALBcJ_P0059644 Hrh3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059645.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179398147 179401803 - MGP_BALBcJ_P0059645 Hrh3 protein_coding protein_coding MGP_BALBcJ_T0059646.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179398147 179401803 - MGP_BALBcJ_P0059646 Hrh3 protein_coding protein_coding MGP_BALBcJ_T0059647.1 MGP_BALBcJ_G0026961.1 mouse_genomes_project 2 179398635 179400987 - Hrh3 protein_coding retained_intron MGP_BALBcJ_T0054248.1 MGP_BALBcJ_G0025607.1 mouse_genomes_project 2 30687520 30717098 - MGP_BALBcJ_P0054248 Zbtb34 protein_coding protein_coding MGP_BALBcJ_T0054249.1 MGP_BALBcJ_G0025607.1 mouse_genomes_project 2 30687520 30713996 - MGP_BALBcJ_P0054249 Zbtb34 protein_coding protein_coding MGP_BALBcJ_T0054250.1 MGP_BALBcJ_G0025607.1 mouse_genomes_project 2 30693331 30717091 - Zbtb34 protein_coding processed_transcript MGP_BALBcJ_T0013441.1 MGP_BALBcJ_G0011538.1 mouse_genomes_project 2 20536385 20536833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098579.1 MGP_BALBcJ_G0036633.1 mouse_genomes_project 2 119986896 119987010 - Gm23983 rRNA rRNA MGP_BALBcJ_T0013728.1 MGP_BALBcJ_G0011825.1 mouse_genomes_project 2 126872532 126872742 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056799.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116896388 116915701 + MGP_BALBcJ_P0056799 Ivd protein_coding protein_coding MGP_BALBcJ_T0056800.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116896462 116902829 + Ivd protein_coding retained_intron MGP_BALBcJ_T0056801.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116903809 116904714 + Ivd protein_coding processed_transcript MGP_BALBcJ_T0056802.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116904739 116909399 + Ivd protein_coding processed_transcript MGP_BALBcJ_T0056803.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116905213 116907209 + Ivd protein_coding retained_intron MGP_BALBcJ_T0056804.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116906754 116913318 + Ivd protein_coding processed_transcript MGP_BALBcJ_T0056805.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116908146 116913753 + Ivd protein_coding processed_transcript MGP_BALBcJ_T0056806.1 MGP_BALBcJ_G0026299.1 mouse_genomes_project 2 116908872 116910330 + Ivd protein_coding processed_transcript MGP_BALBcJ_T0007271.1 MGP_BALBcJ_G0005960.1 mouse_genomes_project 2 112834753 113051230 + lincRNA lincRNA MGP_BALBcJ_T0057249.1 MGP_BALBcJ_G0026383.1 mouse_genomes_project 2 120338357 120369122 + MGP_BALBcJ_P0057249 Sord protein_coding protein_coding MGP_BALBcJ_T0055769.1 MGP_BALBcJ_G0025982.1 mouse_genomes_project 2 85195125 85198465 - MGP_BALBcJ_P0055769 Pramel7 protein_coding protein_coding MGP_BALBcJ_T0055770.1 MGP_BALBcJ_G0025982.1 mouse_genomes_project 2 85196930 85202968 - Pramel7 protein_coding processed_transcript MGP_BALBcJ_T0055771.1 MGP_BALBcJ_G0025982.1 mouse_genomes_project 2 85197024 85203184 - Pramel7 protein_coding processed_transcript MGP_BALBcJ_T0055772.1 MGP_BALBcJ_G0025982.1 mouse_genomes_project 2 85197166 85202977 - Pramel7 protein_coding processed_transcript MGP_BALBcJ_T0055873.1 MGP_BALBcJ_G0026068.1 mouse_genomes_project 2 87194347 87195295 - MGP_BALBcJ_P0055873 Olfr1238 protein_coding protein_coding MGP_BALBcJ_T0099716.1 MGP_BALBcJ_G0037752.1 mouse_genomes_project 2 180753951 180754054 - Gm22708 snRNA snRNA MGP_BALBcJ_T0007200.1 MGP_BALBcJ_G0005903.1 mouse_genomes_project 2 69491266 69492596 + Gm13746 lincRNA lincRNA MGP_BALBcJ_T0100946.1 MGP_BALBcJ_G0038982.1 mouse_genomes_project 2 44011517 44011634 - Gm25264 snoRNA snoRNA MGP_BALBcJ_T0054906.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 58994054 59070030 + MGP_BALBcJ_P0054906 Tank protein_coding protein_coding MGP_BALBcJ_T0054907.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 58994055 59070030 + MGP_BALBcJ_P0054907 Tank protein_coding protein_coding MGP_BALBcJ_T0054908.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 58994080 59069949 + Tank protein_coding processed_transcript MGP_BALBcJ_T0054909.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 58994080 59059766 + Tank protein_coding processed_transcript MGP_BALBcJ_T0054910.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59008957 59070030 + MGP_BALBcJ_P0054910 Tank protein_coding protein_coding MGP_BALBcJ_T0054911.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59008977 59070030 + MGP_BALBcJ_P0054911 Tank protein_coding protein_coding MGP_BALBcJ_T0054912.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59009016 59067658 + MGP_BALBcJ_P0054912 Tank protein_coding protein_coding MGP_BALBcJ_T0054913.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59009044 59031170 + Tank protein_coding processed_transcript MGP_BALBcJ_T0054914.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59009045 59069949 + Tank protein_coding processed_transcript MGP_BALBcJ_T0054915.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59043134 59062049 + Tank protein_coding processed_transcript MGP_BALBcJ_T0054916.1 MGP_BALBcJ_G0025736.1 mouse_genomes_project 2 59059689 59065836 + Tank protein_coding processed_transcript MGP_BALBcJ_T0053381.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24054395 24058941 + MGP_BALBcJ_P0053381 Rpl7a protein_coding protein_coding MGP_BALBcJ_T0053382.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24054448 24058486 + Rpl7a protein_coding processed_transcript MGP_BALBcJ_T0053383.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24054452 24058941 + Rpl7a protein_coding processed_transcript MGP_BALBcJ_T0053384.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24054637 24058941 + Rpl7a protein_coding processed_transcript MGP_BALBcJ_T0053385.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24057466 24058941 + Rpl7a protein_coding processed_transcript MGP_BALBcJ_T0053386.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24058014 24058941 + Rpl7a protein_coding processed_transcript MGP_BALBcJ_T0053387.1 MGP_BALBcJ_G0025472.1 mouse_genomes_project 2 24058066 24058641 + Rpl7a protein_coding processed_transcript MGP_BALBcJ_T0052972.1 MGP_BALBcJ_G0025394.1 mouse_genomes_project 2 22267948 22270530 + MGP_BALBcJ_P0052972 Nrarp protein_coding protein_coding MGP_BALBcJ_T0059716.1 MGP_BALBcJ_G0026978.1 mouse_genomes_project 2 180083328 180085848 - MGP_BALBcJ_P0059716 Bhlhe23 protein_coding protein_coding MGP_BALBcJ_T0010386.1 MGP_BALBcJ_G0008511.1 mouse_genomes_project 2 29948066 29948131 + miRNA miRNA MGP_BALBcJ_T0053246.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23179078 23217801 - MGP_BALBcJ_P0053246 Nacc2 protein_coding protein_coding MGP_BALBcJ_T0053247.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23179078 23248606 - MGP_BALBcJ_P0053247 Nacc2 protein_coding protein_coding MGP_BALBcJ_T0053248.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23184654 23186081 - Nacc2 protein_coding processed_transcript MGP_BALBcJ_T0053249.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23187960 23217443 - Nacc2 protein_coding processed_transcript MGP_BALBcJ_T0053250.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23188082 23215999 - Nacc2 protein_coding processed_transcript MGP_BALBcJ_T0053251.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23215430 23249008 - Nacc2 protein_coding processed_transcript MGP_BALBcJ_T0053252.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23215709 23248571 - MGP_BALBcJ_P0053252 Nacc2 protein_coding protein_coding MGP_BALBcJ_T0053253.1 MGP_BALBcJ_G0025450.1 mouse_genomes_project 2 23215951 23248576 - Nacc2 protein_coding processed_transcript MGP_BALBcJ_T0055790.1 MGP_BALBcJ_G0025994.1 mouse_genomes_project 2 85409892 85410825 - MGP_BALBcJ_P0055790 Olfr1136 protein_coding protein_coding MGP_BALBcJ_T0055613.1 MGP_BALBcJ_G0025876.1 mouse_genomes_project 2 82195155 82205221 + MGP_BALBcJ_P0055613 Med19 protein_coding protein_coding MGP_BALBcJ_T0055614.1 MGP_BALBcJ_G0025876.1 mouse_genomes_project 2 82202638 82204505 + Med19 protein_coding processed_transcript MGP_BALBcJ_T0057284.1 MGP_BALBcJ_G0026394.1 mouse_genomes_project 2 120938876 120949890 + MGP_BALBcJ_P0057284 Bloc1s6 protein_coding protein_coding MGP_BALBcJ_T0057285.1 MGP_BALBcJ_G0026394.1 mouse_genomes_project 2 120938886 120946394 + Bloc1s6 protein_coding processed_transcript MGP_BALBcJ_T0057286.1 MGP_BALBcJ_G0026394.1 mouse_genomes_project 2 120938892 120948513 + Bloc1s6 protein_coding processed_transcript MGP_BALBcJ_T0057287.1 MGP_BALBcJ_G0026394.1 mouse_genomes_project 2 120938900 120939530 + Bloc1s6 protein_coding processed_transcript MGP_BALBcJ_T0057288.1 MGP_BALBcJ_G0026394.1 mouse_genomes_project 2 120938903 120946460 + Bloc1s6 protein_coding processed_transcript MGP_BALBcJ_T0057289.1 MGP_BALBcJ_G0026394.1 mouse_genomes_project 2 120938932 120947420 + Bloc1s6 protein_coding processed_transcript MGP_BALBcJ_T0052508.1 MGP_BALBcJ_G0025318.1 mouse_genomes_project 2 8643685 8644344 - MGP_BALBcJ_P0052508 Gm17490 protein_coding protein_coding MGP_BALBcJ_T0058185.1 MGP_BALBcJ_G0026612.1 mouse_genomes_project 2 149669979 149679596 - MGP_BALBcJ_P0058185 protein_coding protein_coding MGP_BALBcJ_T0058187.1 MGP_BALBcJ_G0026612.1 mouse_genomes_project 2 149671641 149679560 - protein_coding processed_transcript MGP_BALBcJ_T0059150.1 MGP_BALBcJ_G0026850.1 mouse_genomes_project 2 163690805 163694510 - Acot8 protein_coding retained_intron MGP_BALBcJ_T0059151.1 MGP_BALBcJ_G0026850.1 mouse_genomes_project 2 163690805 163703155 - MGP_BALBcJ_P0059151 Acot8 protein_coding protein_coding MGP_BALBcJ_T0059152.1 MGP_BALBcJ_G0026850.1 mouse_genomes_project 2 163690805 163703155 - MGP_BALBcJ_P0059152 Acot8 protein_coding protein_coding MGP_BALBcJ_T0059153.1 MGP_BALBcJ_G0026850.1 mouse_genomes_project 2 163693828 163703154 - MGP_BALBcJ_P0059153 Acot8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059154.1 MGP_BALBcJ_G0026850.1 mouse_genomes_project 2 163697842 163703095 - Acot8 protein_coding retained_intron MGP_BALBcJ_T0055116.1 MGP_BALBcJ_G0025776.1 mouse_genomes_project 2 67219436 67253100 - MGP_BALBcJ_P0055116 Ccdc173 protein_coding protein_coding MGP_BALBcJ_T0055117.1 MGP_BALBcJ_G0025776.1 mouse_genomes_project 2 67243490 67244548 - Ccdc173 protein_coding processed_transcript MGP_BALBcJ_T0053921.1 MGP_BALBcJ_G0025558.1 mouse_genomes_project 2 28560600 28707408 + MGP_BALBcJ_P0053921 Hmcn2 protein_coding protein_coding MGP_BALBcJ_T0053922.1 MGP_BALBcJ_G0025558.1 mouse_genomes_project 2 28560600 28707065 + MGP_BALBcJ_P0053922 Hmcn2 protein_coding unknown_likely_coding MGP_BALBcJ_T0053923.1 MGP_BALBcJ_G0025558.1 mouse_genomes_project 2 28647155 28652693 + MGP_BALBcJ_P0053923 Hmcn2 protein_coding protein_coding MGP_BALBcJ_T0053924.1 MGP_BALBcJ_G0025558.1 mouse_genomes_project 2 28684765 28707393 + Hmcn2 protein_coding retained_intron MGP_BALBcJ_T0053925.1 MGP_BALBcJ_G0025558.1 mouse_genomes_project 2 28693437 28707407 + Hmcn2 protein_coding processed_transcript MGP_BALBcJ_T0053926.1 MGP_BALBcJ_G0025558.1 mouse_genomes_project 2 28701390 28704673 + Hmcn2 protein_coding retained_intron MGP_BALBcJ_T0059509.1 MGP_BALBcJ_G0026926.1 mouse_genomes_project 2 172084538 172100739 + Spo11 protein_coding retained_intron MGP_BALBcJ_T0059510.1 MGP_BALBcJ_G0026926.1 mouse_genomes_project 2 172086685 172100733 + MGP_BALBcJ_P0059510 Spo11 protein_coding protein_coding MGP_BALBcJ_T0059511.1 MGP_BALBcJ_G0026926.1 mouse_genomes_project 2 172086692 172100735 + MGP_BALBcJ_P0059511 Spo11 protein_coding protein_coding MGP_BALBcJ_T0059512.1 MGP_BALBcJ_G0026926.1 mouse_genomes_project 2 172086692 172100744 + MGP_BALBcJ_P0059512 Spo11 protein_coding protein_coding MGP_BALBcJ_T0059513.1 MGP_BALBcJ_G0026926.1 mouse_genomes_project 2 172093026 172099210 + Spo11 protein_coding processed_transcript MGP_BALBcJ_T0010362.1 MGP_BALBcJ_G0008487.1 mouse_genomes_project 2 19658108 19658176 + Mir3967 miRNA miRNA MGP_BALBcJ_T0007269.1 MGP_BALBcJ_G0005958.1 mouse_genomes_project 2 108968985 108975236 - Gm13942 lincRNA lincRNA MGP_BALBcJ_T0059255.1 MGP_BALBcJ_G0026868.1 mouse_genomes_project 2 164289249 164303168 - MGP_BALBcJ_P0059255 Zfp334 protein_coding protein_coding MGP_BALBcJ_T0055707.1 MGP_BALBcJ_G0025921.1 mouse_genomes_project 2 83540301 83541312 + MGP_BALBcJ_P0055707 Olfr1031 protein_coding protein_coding MGP_BALBcJ_T0058533.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154272188 154317194 + MGP_BALBcJ_P0058533 Acss2 protein_coding protein_coding MGP_BALBcJ_T0058534.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154272273 154279483 + Acss2 protein_coding retained_intron MGP_BALBcJ_T0058535.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154272297 154343884 + MGP_BALBcJ_P0058535 Acss2 protein_coding protein_coding MGP_BALBcJ_T0058536.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154272309 154306781 + Acss2 protein_coding retained_intron MGP_BALBcJ_T0058537.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154272347 154316528 + MGP_BALBcJ_P0058537 Acss2 protein_coding protein_coding MGP_BALBcJ_T0058538.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154272347 154316528 + MGP_BALBcJ_P0058538 Acss2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058539.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154303613 154304251 + Acss2 protein_coding retained_intron MGP_BALBcJ_T0058540.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154303624 154311748 + MGP_BALBcJ_P0058540 Acss2 protein_coding protein_coding MGP_BALBcJ_T0058545.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154322987 154343426 + Acss2 protein_coding processed_transcript MGP_BALBcJ_T0058546.1 MGP_BALBcJ_G0026711.1 mouse_genomes_project 2 154327294 154331422 + Acss2 protein_coding retained_intron MGP_BALBcJ_T0013631.1 MGP_BALBcJ_G0011728.1 mouse_genomes_project 2 85353824 85354281 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003968.1 MGP_BALBcJ_G0003538.1 mouse_genomes_project 2 60265119 60266627 + Gm13569 antisense antisense MGP_BALBcJ_T0010473.1 MGP_BALBcJ_G0008598.1 mouse_genomes_project 2 179556901 179556977 + Mir3091 miRNA miRNA MGP_BALBcJ_T0013843.1 MGP_BALBcJ_G0011940.1 mouse_genomes_project 2 165447347 165447843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054738.1 MGP_BALBcJ_G0025705.1 mouse_genomes_project 2 49829561 49856754 - MGP_BALBcJ_P0054738 Arl5a protein_coding protein_coding MGP_BALBcJ_T0054739.1 MGP_BALBcJ_G0025705.1 mouse_genomes_project 2 49833997 49843926 - Arl5a protein_coding retained_intron MGP_BALBcJ_T0057278.1 MGP_BALBcJ_G0026392.1 mouse_genomes_project 2 120834096 120837848 + MGP_BALBcJ_P0057278 AA467197 protein_coding protein_coding MGP_BALBcJ_T0057279.1 MGP_BALBcJ_G0026392.1 mouse_genomes_project 2 120834961 120838312 + MGP_BALBcJ_P0057279 AA467197 protein_coding protein_coding MGP_BALBcJ_T0057280.1 MGP_BALBcJ_G0026392.1 mouse_genomes_project 2 120835026 120838062 + AA467197 protein_coding processed_transcript MGP_BALBcJ_T0057281.1 MGP_BALBcJ_G0026392.1 mouse_genomes_project 2 120835026 120838204 + MGP_BALBcJ_P0057281 AA467197 protein_coding protein_coding MGP_BALBcJ_T0004027.1 MGP_BALBcJ_G0003579.1 mouse_genomes_project 2 102194067 102214587 + Gm13883 antisense antisense MGP_BALBcJ_T0004028.1 MGP_BALBcJ_G0003579.1 mouse_genomes_project 2 102194067 102197938 + Gm13883 antisense antisense MGP_BALBcJ_T0098572.1 MGP_BALBcJ_G0036626.1 mouse_genomes_project 2 91221970 91222073 - Gm23380 rRNA rRNA MGP_BALBcJ_T0001068.1 MGP_BALBcJ_G0000996.1 mouse_genomes_project 2 36052784 36053557 - TEC TEC MGP_BALBcJ_T0054710.1 MGP_BALBcJ_G0025701.1 mouse_genomes_project 2 49372716 49399012 - MGP_BALBcJ_P0054710 Nmi protein_coding protein_coding MGP_BALBcJ_T0054711.1 MGP_BALBcJ_G0025701.1 mouse_genomes_project 2 49372730 49398792 - MGP_BALBcJ_P0054711 Nmi protein_coding protein_coding MGP_BALBcJ_T0054712.1 MGP_BALBcJ_G0025701.1 mouse_genomes_project 2 49372734 49398804 - MGP_BALBcJ_P0054712 Nmi protein_coding protein_coding MGP_BALBcJ_T0054713.1 MGP_BALBcJ_G0025701.1 mouse_genomes_project 2 49372754 49376807 - MGP_BALBcJ_P0054713 Nmi protein_coding protein_coding MGP_BALBcJ_T0054714.1 MGP_BALBcJ_G0025701.1 mouse_genomes_project 2 49381223 49399282 - MGP_BALBcJ_P0054714 Nmi protein_coding protein_coding MGP_BALBcJ_T0054715.1 MGP_BALBcJ_G0025701.1 mouse_genomes_project 2 49385415 49398758 - Nmi protein_coding retained_intron MGP_BALBcJ_T0053989.1 MGP_BALBcJ_G0025570.1 mouse_genomes_project 2 29356580 29372442 + MGP_BALBcJ_P0053989 Plpp7 protein_coding protein_coding MGP_BALBcJ_T0053990.1 MGP_BALBcJ_G0025570.1 mouse_genomes_project 2 29356617 29371748 + MGP_BALBcJ_P0053990 Plpp7 protein_coding protein_coding MGP_BALBcJ_T0053991.1 MGP_BALBcJ_G0025570.1 mouse_genomes_project 2 29357207 29372430 + MGP_BALBcJ_P0053991 Plpp7 protein_coding protein_coding MGP_BALBcJ_T0055569.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81956210 81997814 - MGP_BALBcJ_P0055569 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055570.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81956210 81999309 - MGP_BALBcJ_P0055570 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055571.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81956215 81958044 - Tfpi protein_coding processed_transcript MGP_BALBcJ_T0055572.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81956215 81998204 - MGP_BALBcJ_P0055572 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055573.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81963589 82000774 - MGP_BALBcJ_P0055573 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055574.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81963589 82000786 - MGP_BALBcJ_P0055574 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055575.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81963589 82000759 - MGP_BALBcJ_P0055575 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055576.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81963589 81981457 - MGP_BALBcJ_P0055576 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055577.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81964172 81997833 - MGP_BALBcJ_P0055577 Tfpi protein_coding protein_coding MGP_BALBcJ_T0055578.1 MGP_BALBcJ_G0025870.1 mouse_genomes_project 2 81967518 81997829 - Tfpi protein_coding processed_transcript MGP_BALBcJ_T0013711.1 MGP_BALBcJ_G0011808.1 mouse_genomes_project 2 117630033 117630552 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0052854.1 MGP_BALBcJ_G0025379.1 mouse_genomes_project 2 21331660 21335555 + MGP_BALBcJ_P0052854 Il1f5 protein_coding protein_coding MGP_BALBcJ_T0052855.1 MGP_BALBcJ_G0025379.1 mouse_genomes_project 2 21331917 21333725 + Il1f5 protein_coding retained_intron MGP_BALBcJ_T0052856.1 MGP_BALBcJ_G0025379.1 mouse_genomes_project 2 21331928 21336276 + Il1f5 protein_coding processed_transcript MGP_BALBcJ_T0052857.1 MGP_BALBcJ_G0025379.1 mouse_genomes_project 2 21332145 21336019 + MGP_BALBcJ_P0052857 Il1f5 protein_coding protein_coding MGP_BALBcJ_T0098874.1 MGP_BALBcJ_G0036922.1 mouse_genomes_project 2 159430966 159432808 + Gm14222 sense_intronic sense_intronic MGP_BALBcJ_T0052307.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 958345 1113789 + Frmd4a protein_coding processed_transcript MGP_BALBcJ_T0052308.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 958362 962533 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052309.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 958372 1563620 + MGP_BALBcJ_P0052309 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052310.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1099759 1118208 + Frmd4a protein_coding processed_transcript MGP_BALBcJ_T0052311.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1099768 1563521 + MGP_BALBcJ_P0052311 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052312.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1242316 1521556 + MGP_BALBcJ_P0052312 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052313.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1242663 1484442 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052314.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1242781 1509378 + MGP_BALBcJ_P0052314 Frmd4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052315.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1271371 1543721 + MGP_BALBcJ_P0052315 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052316.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1333917 1475343 + MGP_BALBcJ_P0052316 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052317.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1333919 1376820 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052318.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1345967 1563622 + MGP_BALBcJ_P0052318 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052319.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1346429 1374672 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052320.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1346463 1483280 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052321.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1366590 1563624 + MGP_BALBcJ_P0052321 Frmd4a protein_coding protein_coding MGP_BALBcJ_T0052322.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1417540 1442853 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052323.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1508871 1547266 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052324.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1508892 1537258 + Frmd4a protein_coding retained_intron MGP_BALBcJ_T0052325.1 MGP_BALBcJ_G0025286.1 mouse_genomes_project 2 1515298 1543757 + MGP_BALBcJ_P0052325 Frmd4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004152.1 MGP_BALBcJ_G0003670.1 mouse_genomes_project 2 166155939 166157163 + Gm14291 antisense antisense MGP_BALBcJ_T0013431.1 MGP_BALBcJ_G0011528.1 mouse_genomes_project 2 16769179 16770532 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059648.1 MGP_BALBcJ_G0026962.1 mouse_genomes_project 2 179416980 179460792 + MGP_BALBcJ_P0059648 Osbpl2 protein_coding protein_coding MGP_BALBcJ_T0059649.1 MGP_BALBcJ_G0026962.1 mouse_genomes_project 2 179417009 179434720 + Osbpl2 protein_coding processed_transcript MGP_BALBcJ_T0059650.1 MGP_BALBcJ_G0026962.1 mouse_genomes_project 2 179417078 179457403 + Osbpl2 protein_coding retained_intron MGP_BALBcJ_T0059651.1 MGP_BALBcJ_G0026962.1 mouse_genomes_project 2 179447259 179449289 + Osbpl2 protein_coding retained_intron MGP_BALBcJ_T0007273.1 MGP_BALBcJ_G0005962.1 mouse_genomes_project 2 113147105 113149341 + Gm28493 lincRNA lincRNA MGP_BALBcJ_T0003885.1 MGP_BALBcJ_G0003475.1 mouse_genomes_project 2 10743705 10745624 + Gm37126 antisense antisense MGP_BALBcJ_T0052908.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22000970 22013658 - MGP_BALBcJ_P0052908 Arrdc1 protein_coding protein_coding MGP_BALBcJ_T0052909.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22000970 22013569 - MGP_BALBcJ_P0052909 Arrdc1 protein_coding protein_coding MGP_BALBcJ_T0052910.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22000973 22013551 - Arrdc1 protein_coding retained_intron MGP_BALBcJ_T0052911.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22001607 22013573 - MGP_BALBcJ_P0052911 Arrdc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052912.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22001673 22013551 - Arrdc1 protein_coding retained_intron MGP_BALBcJ_T0052913.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22001776 22013548 - MGP_BALBcJ_P0052913 Arrdc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052914.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22001801 22002819 - Arrdc1 protein_coding retained_intron MGP_BALBcJ_T0052915.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22001941 22013580 - MGP_BALBcJ_P0052915 Arrdc1 protein_coding protein_coding MGP_BALBcJ_T0052916.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22002290 22003522 - Arrdc1 protein_coding retained_intron MGP_BALBcJ_T0052917.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22002530 22013460 - MGP_BALBcJ_P0052917 Arrdc1 protein_coding protein_coding MGP_BALBcJ_T0052918.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22002613 22003750 - Arrdc1 protein_coding processed_transcript MGP_BALBcJ_T0052919.1 MGP_BALBcJ_G0025386.1 mouse_genomes_project 2 22002903 22013594 - Arrdc1 protein_coding retained_intron MGP_BALBcJ_T0053009.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22334059 22344622 - MGP_BALBcJ_P0053009 Ndor1 protein_coding protein_coding MGP_BALBcJ_T0053010.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22334101 22344625 - MGP_BALBcJ_P0053010 Ndor1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053011.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22334808 22337225 - Ndor1 protein_coding processed_transcript MGP_BALBcJ_T0053012.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22336467 22344648 - MGP_BALBcJ_P0053012 Ndor1 protein_coding protein_coding MGP_BALBcJ_T0053013.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22336666 22344625 - MGP_BALBcJ_P0053013 Ndor1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053014.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22336825 22337710 - Ndor1 protein_coding retained_intron MGP_BALBcJ_T0053015.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22338710 22344585 - MGP_BALBcJ_P0053015 Ndor1 protein_coding protein_coding MGP_BALBcJ_T0053016.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22338738 22339581 - Ndor1 protein_coding retained_intron MGP_BALBcJ_T0053017.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22339362 22344655 - MGP_BALBcJ_P0053017 Ndor1 protein_coding protein_coding MGP_BALBcJ_T0053018.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22339413 22344607 - Ndor1 protein_coding processed_transcript MGP_BALBcJ_T0053019.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22340726 22344500 - Ndor1 protein_coding retained_intron MGP_BALBcJ_T0053020.1 MGP_BALBcJ_G0025404.1 mouse_genomes_project 2 22340986 22345261 - MGP_BALBcJ_P0053020 Ndor1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057973.1 MGP_BALBcJ_G0026554.1 mouse_genomes_project 2 142422971 142465139 + MGP_BALBcJ_P0057973 Dstn protein_coding protein_coding MGP_BALBcJ_T0017753.1 MGP_BALBcJ_G0015370.1 mouse_genomes_project 2 73358581 73363681 + Gm13657 processed_transcript processed_transcript MGP_BALBcJ_T0004022.1 MGP_BALBcJ_G0003576.1 mouse_genomes_project 2 99944379 99947004 + antisense antisense MGP_BALBcJ_T0099694.1 MGP_BALBcJ_G0037730.1 mouse_genomes_project 2 119181330 119181436 - Gm23858 snRNA snRNA MGP_BALBcJ_T0058975.1 MGP_BALBcJ_G0026787.1 mouse_genomes_project 2 161772365 161772970 - MGP_BALBcJ_P0058975 Cisd3 protein_coding protein_coding MGP_BALBcJ_T0013546.1 MGP_BALBcJ_G0011643.1 mouse_genomes_project 2 58005173 58005420 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013724.1 MGP_BALBcJ_G0011821.1 mouse_genomes_project 2 125850998 125860901 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058224.1 MGP_BALBcJ_G0026620.1 mouse_genomes_project 2 150308008 150333332 - MGP_BALBcJ_P0058224 Psmf1 protein_coding protein_coding MGP_BALBcJ_T0058225.1 MGP_BALBcJ_G0026620.1 mouse_genomes_project 2 150308258 150313192 - Psmf1 protein_coding retained_intron MGP_BALBcJ_T0058226.1 MGP_BALBcJ_G0026620.1 mouse_genomes_project 2 150308258 150333315 - MGP_BALBcJ_P0058226 Psmf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058227.1 MGP_BALBcJ_G0026620.1 mouse_genomes_project 2 150310461 150336208 - MGP_BALBcJ_P0058227 Psmf1 protein_coding protein_coding MGP_BALBcJ_T0058228.1 MGP_BALBcJ_G0026620.1 mouse_genomes_project 2 150311681 150322126 - Psmf1 protein_coding retained_intron MGP_BALBcJ_T0058229.1 MGP_BALBcJ_G0026620.1 mouse_genomes_project 2 150319642 150333315 - Psmf1 protein_coding retained_intron MGP_BALBcJ_T0004052.1 MGP_BALBcJ_G0003594.1 mouse_genomes_project 2 117031450 117035051 + Gm14089 antisense antisense MGP_BALBcJ_T0052326.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1571092 1601102 - MGP_BALBcJ_P0052326 Prpf18 protein_coding unknown_likely_coding MGP_BALBcJ_T0052327.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1571092 1601207 - MGP_BALBcJ_P0052327 Prpf18 protein_coding protein_coding MGP_BALBcJ_T0052328.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1572971 1601227 - Prpf18 protein_coding processed_transcript MGP_BALBcJ_T0052329.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1573062 1601234 - MGP_BALBcJ_P0052329 Prpf18 protein_coding protein_coding MGP_BALBcJ_T0052330.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1587936 1601202 - MGP_BALBcJ_P0052330 Prpf18 protein_coding protein_coding MGP_BALBcJ_T0052331.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1587960 1601208 - Prpf18 protein_coding processed_transcript MGP_BALBcJ_T0052332.1 MGP_BALBcJ_G0025287.1 mouse_genomes_project 2 1592807 1601224 - Prpf18 protein_coding processed_transcript MGP_BALBcJ_T0102403.1 MGP_BALBcJ_G0040219.1 mouse_genomes_project 2 83195720 83196174 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007120.1 MGP_BALBcJ_G0005839.1 mouse_genomes_project 2 8351735 8356359 + Gm13293 lincRNA lincRNA MGP_BALBcJ_T0010395.1 MGP_BALBcJ_G0008520.1 mouse_genomes_project 2 39780966 39781096 - Mir6336 miRNA miRNA MGP_BALBcJ_T0007199.1 MGP_BALBcJ_G0005902.1 mouse_genomes_project 2 69279489 69281559 - Gm17250 lincRNA lincRNA MGP_BALBcJ_T0017727.1 MGP_BALBcJ_G0015352.1 mouse_genomes_project 2 32216567 32221131 + Gm13448 processed_transcript processed_transcript MGP_BALBcJ_T0057543.1 MGP_BALBcJ_G0026454.1 mouse_genomes_project 2 127195063 127213085 - MGP_BALBcJ_P0057543 Zc3h8 protein_coding protein_coding MGP_BALBcJ_T0017717.1 MGP_BALBcJ_G0015346.1 mouse_genomes_project 2 26445514 26453402 - 6530402F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017718.1 MGP_BALBcJ_G0015346.1 mouse_genomes_project 2 26451318 26453415 - 6530402F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0058277.1 MGP_BALBcJ_G0026643.1 mouse_genomes_project 2 151171857 151174058 + MGP_BALBcJ_P0058277 Defb21 protein_coding protein_coding MGP_BALBcJ_T0010444.1 MGP_BALBcJ_G0008569.1 mouse_genomes_project 2 137308598 137308677 + Mir1952 miRNA miRNA MGP_BALBcJ_T0007358.1 MGP_BALBcJ_G0006030.1 mouse_genomes_project 2 161717922 161719029 - Gm14255 lincRNA lincRNA MGP_BALBcJ_T0013622.1 MGP_BALBcJ_G0011719.1 mouse_genomes_project 2 85009144 85009559 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053960.1 MGP_BALBcJ_G0025565.1 mouse_genomes_project 2 29069007 29101921 - MGP_BALBcJ_P0053960 Fibcd1 protein_coding protein_coding MGP_BALBcJ_T0053279.1 MGP_BALBcJ_G0025457.1 mouse_genomes_project 2 23478058 23485681 - MGP_BALBcJ_P0053279 Card9 protein_coding protein_coding MGP_BALBcJ_T0053280.1 MGP_BALBcJ_G0025457.1 mouse_genomes_project 2 23478069 23478709 - Card9 protein_coding processed_transcript MGP_BALBcJ_T0053281.1 MGP_BALBcJ_G0025457.1 mouse_genomes_project 2 23478069 23486852 - MGP_BALBcJ_P0053281 Card9 protein_coding protein_coding MGP_BALBcJ_T0007410.1 MGP_BALBcJ_G0006075.1 mouse_genomes_project 2 180140043 180202835 - Gm14342 lincRNA lincRNA MGP_BALBcJ_T0003970.1 MGP_BALBcJ_G0003540.1 mouse_genomes_project 2 62679318 62680238 + Gm13594 antisense antisense MGP_BALBcJ_T0059314.1 MGP_BALBcJ_G0026879.1 mouse_genomes_project 2 165756625 165847437 + MGP_BALBcJ_P0059314 Arfgef2 protein_coding protein_coding MGP_BALBcJ_T0059315.1 MGP_BALBcJ_G0026879.1 mouse_genomes_project 2 165773761 165798401 + MGP_BALBcJ_P0059315 Arfgef2 protein_coding protein_coding MGP_BALBcJ_T0059500.1 MGP_BALBcJ_G0026923.1 mouse_genomes_project 2 171565681 171567493 + MGP_BALBcJ_P0059500 Fam209 protein_coding protein_coding MGP_BALBcJ_T0055896.1 MGP_BALBcJ_G0026084.1 mouse_genomes_project 2 87644760 87645666 - MGP_BALBcJ_P0055896 Olfr48 protein_coding protein_coding MGP_BALBcJ_T0059797.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643767 180681063 + MGP_BALBcJ_P0059797 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059798.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643781 180671905 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059799.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643790 180681025 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059800.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643790 180681063 + MGP_BALBcJ_P0059800 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059801.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643813 180681063 + MGP_BALBcJ_P0059801 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059802.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643813 180681063 + MGP_BALBcJ_P0059802 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059803.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643813 180681025 + MGP_BALBcJ_P0059803 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059804.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180643991 180647922 + MGP_BALBcJ_P0059804 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059805.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180652844 180681063 + MGP_BALBcJ_P0059805 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059806.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180660108 180671495 + MGP_BALBcJ_P0059806 Rtel1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059807.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180663294 180671478 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059808.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180673901 180674402 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059809.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180674464 180676510 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059810.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180674574 180675602 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059811.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180676528 180679999 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059812.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180678846 180680260 + Rtel1 protein_coding processed_transcript MGP_BALBcJ_T0059813.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180679649 180680464 + Rtel1 protein_coding retained_intron MGP_BALBcJ_T0059814.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180680140 180681062 + Rtel1 protein_coding processed_transcript MGP_BALBcJ_T0059815.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180680211 180681061 + MGP_BALBcJ_P0059815 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059816.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180680416 180681063 + MGP_BALBcJ_P0059816 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0059817.1 MGP_BALBcJ_G0026994.1 mouse_genomes_project 2 180680416 180681063 + MGP_BALBcJ_P0059817 Rtel1 protein_coding protein_coding MGP_BALBcJ_T0099705.1 MGP_BALBcJ_G0037741.1 mouse_genomes_project 2 138942360 138942467 - Gm23846 snRNA snRNA MGP_BALBcJ_T0013812.1 MGP_BALBcJ_G0011909.1 mouse_genomes_project 2 154821719 154822262 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055837.1 MGP_BALBcJ_G0026038.1 mouse_genomes_project 2 86622276 86623192 + MGP_BALBcJ_P0055837 Olfr1202 protein_coding protein_coding MGP_BALBcJ_T0059592.1 MGP_BALBcJ_G0026948.1 mouse_genomes_project 2 173903471 173927191 + MGP_BALBcJ_P0059592 Edn3 protein_coding protein_coding MGP_BALBcJ_T0059593.1 MGP_BALBcJ_G0026948.1 mouse_genomes_project 2 173903651 173925129 + MGP_BALBcJ_P0059593 Edn3 protein_coding protein_coding MGP_BALBcJ_T0059594.1 MGP_BALBcJ_G0026948.1 mouse_genomes_project 2 173903904 173925734 + Edn3 protein_coding retained_intron MGP_BALBcJ_T0059595.1 MGP_BALBcJ_G0026948.1 mouse_genomes_project 2 173912774 173925689 + Edn3 protein_coding processed_transcript MGP_BALBcJ_T0013618.1 MGP_BALBcJ_G0011715.1 mouse_genomes_project 2 84809935 84816040 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054448.1 MGP_BALBcJ_G0025645.1 mouse_genomes_project 2 33970657 33971587 + MGP_BALBcJ_P0054448 Olfr346 protein_coding protein_coding MGP_BALBcJ_T0056543.1 MGP_BALBcJ_G0026205.1 mouse_genomes_project 2 104924142 104935954 - MGP_BALBcJ_P0056543 Arl14ep protein_coding protein_coding MGP_BALBcJ_T0056544.1 MGP_BALBcJ_G0026205.1 mouse_genomes_project 2 104926037 104932000 - MGP_BALBcJ_P0056544 Arl14ep protein_coding protein_coding MGP_BALBcJ_T0056545.1 MGP_BALBcJ_G0026205.1 mouse_genomes_project 2 104926799 104930886 - Arl14ep protein_coding retained_intron MGP_BALBcJ_T0056546.1 MGP_BALBcJ_G0026205.1 mouse_genomes_project 2 104929016 104935927 - Arl14ep protein_coding retained_intron MGP_BALBcJ_T0102410.1 MGP_BALBcJ_G0040226.1 mouse_genomes_project 2 84129204 84130146 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010331.1 MGP_BALBcJ_G0008456.1 mouse_genomes_project 2 7509376 7509456 + miRNA miRNA MGP_BALBcJ_T0013573.1 MGP_BALBcJ_G0011670.1 mouse_genomes_project 2 70094396 70094797 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013791.1 MGP_BALBcJ_G0011888.1 mouse_genomes_project 2 149148029 149149237 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001040.1 MGP_BALBcJ_G0000968.1 mouse_genomes_project 2 11255392 11255533 - TEC TEC MGP_BALBcJ_T0055720.1 MGP_BALBcJ_G0025934.1 mouse_genomes_project 2 83819377 83820340 - MGP_BALBcJ_P0055720 Olfr1048 protein_coding protein_coding MGP_BALBcJ_T0053712.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27342861 27362909 + MGP_BALBcJ_P0053712 Tbc1d13 protein_coding protein_coding MGP_BALBcJ_T0053713.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27342861 27346412 + MGP_BALBcJ_P0053713 Tbc1d13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053714.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27342887 27344268 + Tbc1d13 protein_coding retained_intron MGP_BALBcJ_T0053715.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27342906 27346295 + Tbc1d13 protein_coding processed_transcript MGP_BALBcJ_T0053716.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27342921 27345792 + MGP_BALBcJ_P0053716 Tbc1d13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053717.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27342936 27346629 + Tbc1d13 protein_coding processed_transcript MGP_BALBcJ_T0053718.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27346145 27353109 + Tbc1d13 protein_coding processed_transcript MGP_BALBcJ_T0053719.1 MGP_BALBcJ_G0025528.1 mouse_genomes_project 2 27352863 27357663 + Tbc1d13 protein_coding retained_intron MGP_BALBcJ_T0010364.1 MGP_BALBcJ_G0008489.1 mouse_genomes_project 2 22015388 22015809 + miRNA miRNA MGP_BALBcJ_T0011468.1 MGP_BALBcJ_G0009593.1 mouse_genomes_project 2 18300982 18301159 - Gm23007 misc_RNA misc_RNA MGP_BALBcJ_T0059584.1 MGP_BALBcJ_G0026945.1 mouse_genomes_project 2 173597202 173600237 - MGP_BALBcJ_P0059584 Atp5e protein_coding protein_coding MGP_BALBcJ_T0059585.1 MGP_BALBcJ_G0026945.1 mouse_genomes_project 2 173597205 173600181 - Atp5e protein_coding retained_intron MGP_BALBcJ_T0059586.1 MGP_BALBcJ_G0026945.1 mouse_genomes_project 2 173598647 173600221 - Atp5e protein_coding retained_intron MGP_BALBcJ_T0007299.1 MGP_BALBcJ_G0005981.1 mouse_genomes_project 2 124748929 124782985 - Gm26697 lincRNA lincRNA MGP_BALBcJ_T0052655.1 MGP_BALBcJ_G0025341.1 mouse_genomes_project 2 13418798 13815721 + MGP_BALBcJ_P0052655 Plxdc2 protein_coding protein_coding MGP_BALBcJ_T0052656.1 MGP_BALBcJ_G0025341.1 mouse_genomes_project 2 13419381 13811571 + MGP_BALBcJ_P0052656 Plxdc2 protein_coding protein_coding MGP_BALBcJ_T0052657.1 MGP_BALBcJ_G0025341.1 mouse_genomes_project 2 13419611 13811739 + MGP_BALBcJ_P0052657 Plxdc2 protein_coding protein_coding MGP_BALBcJ_T0052658.1 MGP_BALBcJ_G0025341.1 mouse_genomes_project 2 13692003 13811572 + Plxdc2 protein_coding processed_transcript MGP_BALBcJ_T0059546.1 MGP_BALBcJ_G0026938.1 mouse_genomes_project 2 173200645 173216962 + MGP_BALBcJ_P0059546 Stx16 protein_coding protein_coding MGP_BALBcJ_T0059547.1 MGP_BALBcJ_G0026938.1 mouse_genomes_project 2 173200655 173215263 + MGP_BALBcJ_P0059547 Stx16 protein_coding protein_coding MGP_BALBcJ_T0059548.1 MGP_BALBcJ_G0026938.1 mouse_genomes_project 2 173200659 173218055 + MGP_BALBcJ_P0059548 Stx16 protein_coding protein_coding MGP_BALBcJ_T0059549.1 MGP_BALBcJ_G0026938.1 mouse_genomes_project 2 173201259 173224313 + MGP_BALBcJ_P0059549 Stx16 protein_coding protein_coding MGP_BALBcJ_T0059550.1 MGP_BALBcJ_G0026938.1 mouse_genomes_project 2 173201395 173224312 + MGP_BALBcJ_P0059550 Stx16 protein_coding protein_coding MGP_BALBcJ_T0059551.1 MGP_BALBcJ_G0026938.1 mouse_genomes_project 2 173201403 173221497 + MGP_BALBcJ_P0059551 Stx16 protein_coding protein_coding MGP_BALBcJ_T0013399.1 MGP_BALBcJ_G0011496.1 mouse_genomes_project 2 7899930 7900741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057336.1 MGP_BALBcJ_G0026405.1 mouse_genomes_project 2 123805401 123867330 - MGP_BALBcJ_P0057336 Cep152 protein_coding protein_coding MGP_BALBcJ_T0057337.1 MGP_BALBcJ_G0026405.1 mouse_genomes_project 2 123805713 123863461 - MGP_BALBcJ_P0057337 Cep152 protein_coding unknown_likely_coding MGP_BALBcJ_T0055099.1 MGP_BALBcJ_G0025773.1 mouse_genomes_project 2 67122553 67138188 + MGP_BALBcJ_P0055099 Klhl41 protein_coding protein_coding MGP_BALBcJ_T0052920.1 MGP_BALBcJ_G0025387.1 mouse_genomes_project 2 22029694 22041931 + MGP_BALBcJ_P0052920 Zmynd19 protein_coding protein_coding MGP_BALBcJ_T0007152.1 MGP_BALBcJ_G0005862.1 mouse_genomes_project 2 29797199 29800159 + Gm13412 lincRNA lincRNA MGP_BALBcJ_T0057942.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897336 140895955 + MGP_BALBcJ_P0057942 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057943.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897383 140895955 + MGP_BALBcJ_P0057943 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057944.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897383 139219398 + MGP_BALBcJ_P0057944 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057945.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897457 138925549 + MGP_BALBcJ_P0057945 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057946.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897460 139334345 + Macrod2 protein_coding retained_intron MGP_BALBcJ_T0057947.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897462 138925552 + MGP_BALBcJ_P0057947 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057948.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897462 140887419 + MGP_BALBcJ_P0057948 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057949.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897469 139028305 + Macrod2 protein_coding processed_transcript MGP_BALBcJ_T0057950.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897483 139158857 + Macrod2 protein_coding processed_transcript MGP_BALBcJ_T0057951.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897487 138923093 + Macrod2 protein_coding processed_transcript MGP_BALBcJ_T0057952.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 138897622 138923093 + MGP_BALBcJ_P0057952 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0057956.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 139535165 139656658 + Macrod2 protein_coding processed_transcript MGP_BALBcJ_T0057957.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 140063837 140895955 + Macrod2 protein_coding processed_transcript MGP_BALBcJ_T0057958.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 140675608 140895953 + MGP_BALBcJ_P0057958 Macrod2 protein_coding unknown_likely_coding MGP_BALBcJ_T0057959.1 MGP_BALBcJ_G0026547.1 mouse_genomes_project 2 140688488 140735444 + MGP_BALBcJ_P0057959 Macrod2 protein_coding protein_coding MGP_BALBcJ_T0010323.1 MGP_BALBcJ_G0008448.1 mouse_genomes_project 2 7491761 7491882 + Mir669d miRNA miRNA MGP_BALBcJ_T0055897.1 MGP_BALBcJ_G0026085.1 mouse_genomes_project 2 87673181 87676495 + MGP_BALBcJ_P0055897 Olfr1257 protein_coding protein_coding MGP_BALBcJ_T0055898.1 MGP_BALBcJ_G0026085.1 mouse_genomes_project 2 87675531 87676547 + MGP_BALBcJ_P0055898 Olfr1257 protein_coding protein_coding MGP_BALBcJ_T0053111.1 MGP_BALBcJ_G0025421.1 mouse_genomes_project 2 22554172 22556011 + Clic3 protein_coding processed_transcript MGP_BALBcJ_T0053112.1 MGP_BALBcJ_G0025421.1 mouse_genomes_project 2 22554172 22556111 + MGP_BALBcJ_P0053112 Clic3 protein_coding protein_coding MGP_BALBcJ_T0053113.1 MGP_BALBcJ_G0025421.1 mouse_genomes_project 2 22554183 22556111 + MGP_BALBcJ_P0053113 Clic3 protein_coding protein_coding MGP_BALBcJ_T0053114.1 MGP_BALBcJ_G0025421.1 mouse_genomes_project 2 22554225 22556111 + Clic3 protein_coding processed_transcript MGP_BALBcJ_T0053115.1 MGP_BALBcJ_G0025421.1 mouse_genomes_project 2 22554231 22556018 + Clic3 protein_coding processed_transcript MGP_BALBcJ_T0053116.1 MGP_BALBcJ_G0025421.1 mouse_genomes_project 2 22554970 22555550 + Clic3 protein_coding processed_transcript MGP_BALBcJ_T0003958.1 MGP_BALBcJ_G0003532.1 mouse_genomes_project 2 55590150 55603213 + Gm13546 antisense antisense MGP_BALBcJ_T0003959.1 MGP_BALBcJ_G0003532.1 mouse_genomes_project 2 55595886 55602487 + Gm13546 antisense antisense MGP_BALBcJ_T0001033.1 MGP_BALBcJ_G0000961.1 mouse_genomes_project 2 10102669 10106634 + TEC TEC MGP_BALBcJ_T0001057.1 MGP_BALBcJ_G0000985.1 mouse_genomes_project 2 32584470 32586091 + TEC TEC MGP_BALBcJ_T0004167.1 MGP_BALBcJ_G0003682.1 mouse_genomes_project 2 173249499 173308970 - Gm10714 antisense antisense MGP_BALBcJ_T0004168.1 MGP_BALBcJ_G0003682.1 mouse_genomes_project 2 173250021 173250350 - Gm10714 antisense antisense MGP_BALBcJ_T0057600.1 MGP_BALBcJ_G0026472.1 mouse_genomes_project 2 128590492 128660607 + MGP_BALBcJ_P0057600 Tmc2 protein_coding protein_coding MGP_BALBcJ_T0057601.1 MGP_BALBcJ_G0026472.1 mouse_genomes_project 2 128591836 128660379 + MGP_BALBcJ_P0057601 Tmc2 protein_coding protein_coding MGP_BALBcJ_T0059489.1 MGP_BALBcJ_G0026919.1 mouse_genomes_project 2 171455385 171460775 + MGP_BALBcJ_P0059489 Cstf1 protein_coding protein_coding MGP_BALBcJ_T0059490.1 MGP_BALBcJ_G0026919.1 mouse_genomes_project 2 171455438 171467123 + MGP_BALBcJ_P0059490 Cstf1 protein_coding protein_coding MGP_BALBcJ_T0059121.1 MGP_BALBcJ_G0026837.1 mouse_genomes_project 2 163508134 163513192 + MGP_BALBcJ_P0059121 Wfdc6a protein_coding protein_coding MGP_BALBcJ_T0007300.1 MGP_BALBcJ_G0005982.1 mouse_genomes_project 2 126447588 126462442 + Gm14009 lincRNA lincRNA MGP_BALBcJ_T0101887.1 MGP_BALBcJ_G0039785.1 mouse_genomes_project 2 84510863 84511810 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0059402.1 MGP_BALBcJ_G0026896.1 mouse_genomes_project 2 166957958 166989833 - Fam65c protein_coding processed_transcript MGP_BALBcJ_T0059403.1 MGP_BALBcJ_G0026896.1 mouse_genomes_project 2 166957960 166989833 - MGP_BALBcJ_P0059403 Fam65c protein_coding protein_coding MGP_BALBcJ_T0059404.1 MGP_BALBcJ_G0026896.1 mouse_genomes_project 2 166962876 166964574 - Fam65c protein_coding retained_intron MGP_BALBcJ_T0059405.1 MGP_BALBcJ_G0026896.1 mouse_genomes_project 2 166966606 166969886 - Fam65c protein_coding retained_intron MGP_BALBcJ_T0057733.1 MGP_BALBcJ_G0026500.1 mouse_genomes_project 2 129603593 129607264 - MGP_BALBcJ_P0057733 Spef1 protein_coding protein_coding MGP_BALBcJ_T0004051.1 MGP_BALBcJ_G0003593.1 mouse_genomes_project 2 116867281 116871494 - Gm14091 antisense antisense MGP_BALBcJ_T0058123.1 MGP_BALBcJ_G0026593.1 mouse_genomes_project 2 147365122 147375833 + MGP_BALBcJ_P0058123 Cst13 protein_coding protein_coding MGP_BALBcJ_T0059507.1 MGP_BALBcJ_G0026925.1 mouse_genomes_project 2 171974304 172046591 - MGP_BALBcJ_P0059507 Bmp7 protein_coding protein_coding MGP_BALBcJ_T0059508.1 MGP_BALBcJ_G0026925.1 mouse_genomes_project 2 172022490 172046362 - Bmp7 protein_coding retained_intron MGP_BALBcJ_T0058208.1 MGP_BALBcJ_G0026616.1 mouse_genomes_project 2 150163457 150180842 + MGP_BALBcJ_P0058208 Sdcbp2 protein_coding protein_coding MGP_BALBcJ_T0056004.1 MGP_BALBcJ_G0026112.1 mouse_genomes_project 2 88906224 88924788 + MGP_BALBcJ_P0056004 Mybpc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0056005.1 MGP_BALBcJ_G0026112.1 mouse_genomes_project 2 88906418 88924787 + MGP_BALBcJ_P0056005 Mybpc3 protein_coding protein_coding MGP_BALBcJ_T0056006.1 MGP_BALBcJ_G0026112.1 mouse_genomes_project 2 88906418 88924781 + MGP_BALBcJ_P0056006 Mybpc3 protein_coding protein_coding MGP_BALBcJ_T0056007.1 MGP_BALBcJ_G0026112.1 mouse_genomes_project 2 88906418 88924781 + MGP_BALBcJ_P0056007 Mybpc3 protein_coding protein_coding MGP_BALBcJ_T0013834.1 MGP_BALBcJ_G0011931.1 mouse_genomes_project 2 161654244 161654577 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101886.1 MGP_BALBcJ_G0039784.1 mouse_genomes_project 2 35948609 35965448 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0007121.1 MGP_BALBcJ_G0005840.1 mouse_genomes_project 2 8392172 8394214 + Gm13291 lincRNA lincRNA MGP_BALBcJ_T0007185.1 MGP_BALBcJ_G0005889.1 mouse_genomes_project 2 52849783 52860519 + Gm14033 lincRNA lincRNA MGP_BALBcJ_T0007186.1 MGP_BALBcJ_G0005889.1 mouse_genomes_project 2 52849808 52872580 + Gm14033 lincRNA lincRNA MGP_BALBcJ_T0054509.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35081789 35561435 - MGP_BALBcJ_P0054509 Dennd1a protein_coding protein_coding MGP_BALBcJ_T0054510.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35083870 35135272 - MGP_BALBcJ_P0054510 Dennd1a protein_coding protein_coding MGP_BALBcJ_T0054511.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35099727 35561450 - MGP_BALBcJ_P0054511 Dennd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054512.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35219735 35561437 - MGP_BALBcJ_P0054512 Dennd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054513.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35219780 35561248 - MGP_BALBcJ_P0054513 Dennd1a protein_coding protein_coding MGP_BALBcJ_T0054514.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35305196 35442877 - Dennd1a protein_coding retained_intron MGP_BALBcJ_T0054515.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35324850 35561418 - MGP_BALBcJ_P0054515 Dennd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054516.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35402885 35561278 - MGP_BALBcJ_P0054516 Dennd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054517.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35436046 35517443 - Dennd1a protein_coding retained_intron MGP_BALBcJ_T0054518.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35440533 35444615 - Dennd1a protein_coding retained_intron MGP_BALBcJ_T0054519.1 MGP_BALBcJ_G0025672.1 mouse_genomes_project 2 35511337 35561274 - Dennd1a protein_coding retained_intron MGP_BALBcJ_T0057726.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129578844 129592889 - MGP_BALBcJ_P0057726 1700037H04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057727.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129578845 129581549 - 1700037H04Rik protein_coding retained_intron MGP_BALBcJ_T0057728.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129578845 129592875 - MGP_BALBcJ_P0057728 1700037H04Rik protein_coding protein_coding MGP_BALBcJ_T0057729.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129579314 129592879 - MGP_BALBcJ_P0057729 1700037H04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057730.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129579324 129592936 - MGP_BALBcJ_P0057730 1700037H04Rik protein_coding protein_coding MGP_BALBcJ_T0057731.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129579681 129592897 - MGP_BALBcJ_P0057731 1700037H04Rik protein_coding protein_coding MGP_BALBcJ_T0057732.1 MGP_BALBcJ_G0026499.1 mouse_genomes_project 2 129580801 129592897 - 1700037H04Rik protein_coding processed_transcript MGP_BALBcJ_T0059364.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381360 166439219 + MGP_BALBcJ_P0059364 Slc9a8 protein_coding protein_coding MGP_BALBcJ_T0059365.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381369 166436855 + MGP_BALBcJ_P0059365 Slc9a8 protein_coding protein_coding MGP_BALBcJ_T0059366.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381369 166439217 + MGP_BALBcJ_P0059366 Slc9a8 protein_coding protein_coding MGP_BALBcJ_T0059367.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381371 166385783 + Slc9a8 protein_coding retained_intron MGP_BALBcJ_T0059368.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381378 166408819 + Slc9a8 protein_coding retained_intron MGP_BALBcJ_T0059369.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381380 166439218 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0059370.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381385 166396265 + Slc9a8 protein_coding retained_intron MGP_BALBcJ_T0059371.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381386 166429478 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0059372.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166381390 166439218 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0059373.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166383767 166429505 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0059374.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166412834 166429503 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0059375.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166412923 166430843 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0059376.1 MGP_BALBcJ_G0026888.1 mouse_genomes_project 2 166413023 166439218 + Slc9a8 protein_coding processed_transcript MGP_BALBcJ_T0055857.1 MGP_BALBcJ_G0026056.1 mouse_genomes_project 2 86933830 86934766 - MGP_BALBcJ_P0055857 Olfr1222 protein_coding protein_coding MGP_BALBcJ_T0055858.1 MGP_BALBcJ_G0026056.1 mouse_genomes_project 2 86934115 86934768 - MGP_BALBcJ_P0055858 Olfr1222 protein_coding protein_coding MGP_BALBcJ_T0004132.1 MGP_BALBcJ_G0003658.1 mouse_genomes_project 2 162344600 162345649 + 2310001K24Rik antisense antisense MGP_BALBcJ_T0004133.1 MGP_BALBcJ_G0003658.1 mouse_genomes_project 2 162345188 162345647 + 2310001K24Rik antisense antisense MGP_BALBcJ_T0058821.1 MGP_BALBcJ_G0026756.1 mouse_genomes_project 2 156167341 156198471 + MGP_BALBcJ_P0058821 Manbal protein_coding protein_coding MGP_BALBcJ_T0056838.1 MGP_BALBcJ_G0026309.1 mouse_genomes_project 2 117212508 117215578 + MGP_BALBcJ_P0056838 Gm14137 protein_coding protein_coding MGP_BALBcJ_T0013690.1 MGP_BALBcJ_G0011787.1 mouse_genomes_project 2 109106287 109111887 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053864.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28192082 28198139 + MGP_BALBcJ_P0053864 Tor1b protein_coding protein_coding MGP_BALBcJ_T0053865.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28192102 28198135 + Tor1b protein_coding retained_intron MGP_BALBcJ_T0053866.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28192114 28195618 + MGP_BALBcJ_P0053866 Tor1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053867.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28192295 28196109 + Tor1b protein_coding retained_intron MGP_BALBcJ_T0053868.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28192310 28198136 + MGP_BALBcJ_P0053868 Tor1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053869.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28192875 28195997 + MGP_BALBcJ_P0053869 Tor1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053870.1 MGP_BALBcJ_G0025551.1 mouse_genomes_project 2 28194376 28196236 + Tor1b protein_coding processed_transcript MGP_BALBcJ_T0058150.1 MGP_BALBcJ_G0026605.1 mouse_genomes_project 2 149246040 149299585 - MGP_BALBcJ_P0058150 Acss1 protein_coding protein_coding MGP_BALBcJ_T0058151.1 MGP_BALBcJ_G0026605.1 mouse_genomes_project 2 149256263 149265905 - Acss1 protein_coding processed_transcript MGP_BALBcJ_T0058152.1 MGP_BALBcJ_G0026605.1 mouse_genomes_project 2 149256343 149265903 - Acss1 protein_coding processed_transcript MGP_BALBcJ_T0058153.1 MGP_BALBcJ_G0026605.1 mouse_genomes_project 2 149265769 149299827 - Acss1 protein_coding processed_transcript MGP_BALBcJ_T0058154.1 MGP_BALBcJ_G0026605.1 mouse_genomes_project 2 149290921 149299541 - Acss1 protein_coding retained_intron MGP_BALBcJ_T0057734.1 MGP_BALBcJ_G0026501.1 mouse_genomes_project 2 129607772 129613141 - MGP_BALBcJ_P0057734 Cenpb protein_coding protein_coding MGP_BALBcJ_T0054804.1 MGP_BALBcJ_G0025722.1 mouse_genomes_project 2 55996797 56065933 + Upp2 protein_coding processed_transcript MGP_BALBcJ_T0054805.1 MGP_BALBcJ_G0025722.1 mouse_genomes_project 2 55996817 56014244 + Upp2 protein_coding processed_transcript MGP_BALBcJ_T0054806.1 MGP_BALBcJ_G0025722.1 mouse_genomes_project 2 55996886 56218498 + MGP_BALBcJ_P0054806 Upp2 protein_coding protein_coding MGP_BALBcJ_T0054807.1 MGP_BALBcJ_G0025722.1 mouse_genomes_project 2 56180154 56216772 + MGP_BALBcJ_P0054807 Upp2 protein_coding protein_coding MGP_BALBcJ_T0054808.1 MGP_BALBcJ_G0025722.1 mouse_genomes_project 2 56180392 56216198 + MGP_BALBcJ_P0054808 Upp2 protein_coding protein_coding MGP_BALBcJ_T0054809.1 MGP_BALBcJ_G0025722.1 mouse_genomes_project 2 56190874 56215832 + Upp2 protein_coding processed_transcript MGP_BALBcJ_T0056290.1 MGP_BALBcJ_G0026154.1 mouse_genomes_project 2 91865772 91900117 - Hsd17b12 protein_coding processed_transcript MGP_BALBcJ_T0056291.1 MGP_BALBcJ_G0026154.1 mouse_genomes_project 2 91865772 91993207 - MGP_BALBcJ_P0056291 Hsd17b12 protein_coding protein_coding MGP_BALBcJ_T0056292.1 MGP_BALBcJ_G0026154.1 mouse_genomes_project 2 91865785 91993151 - Hsd17b12 protein_coding processed_transcript MGP_BALBcJ_T0056293.1 MGP_BALBcJ_G0026154.1 mouse_genomes_project 2 91866605 91900412 - Hsd17b12 protein_coding processed_transcript MGP_BALBcJ_T0056294.1 MGP_BALBcJ_G0026154.1 mouse_genomes_project 2 91947885 91993135 - Hsd17b12 protein_coding processed_transcript MGP_BALBcJ_T0055730.1 MGP_BALBcJ_G0025944.1 mouse_genomes_project 2 84056176 84057059 - MGP_BALBcJ_P0055730 protein_coding protein_coding MGP_BALBcJ_T0057310.1 MGP_BALBcJ_G0026397.1 mouse_genomes_project 2 123306053 123326732 + MGP_BALBcJ_P0057310 Slc24a5 protein_coding protein_coding MGP_BALBcJ_T0057311.1 MGP_BALBcJ_G0026397.1 mouse_genomes_project 2 123307173 123321281 + Slc24a5 protein_coding processed_transcript MGP_BALBcJ_T0057312.1 MGP_BALBcJ_G0026397.1 mouse_genomes_project 2 123318283 123321134 + Slc24a5 protein_coding retained_intron MGP_BALBcJ_T0056697.1 MGP_BALBcJ_G0026277.1 mouse_genomes_project 2 112159806 112168092 - MGP_BALBcJ_P0056697 Zfp770 protein_coding protein_coding MGP_BALBcJ_T0056698.1 MGP_BALBcJ_G0026277.1 mouse_genomes_project 2 112165182 112168063 - Zfp770 protein_coding processed_transcript MGP_BALBcJ_T0058124.1 MGP_BALBcJ_G0026594.1 mouse_genomes_project 2 147386075 147390117 + MGP_BALBcJ_P0058124 Cst9 protein_coding protein_coding MGP_BALBcJ_T0056671.1 MGP_BALBcJ_G0026269.1 mouse_genomes_project 2 111272850 111285263 + MGP_BALBcJ_P0056671 Tmco5b protein_coding protein_coding MGP_BALBcJ_T0054446.1 MGP_BALBcJ_G0025643.1 mouse_genomes_project 2 33851518 33852448 + MGP_BALBcJ_P0054446 Olfr344 protein_coding protein_coding MGP_BALBcJ_T0055703.1 MGP_BALBcJ_G0025918.1 mouse_genomes_project 2 83462124 83463063 + MGP_BALBcJ_P0055703 Olfr1025-ps1 protein_coding protein_coding MGP_BALBcJ_T0055704.1 MGP_BALBcJ_G0025918.1 mouse_genomes_project 2 83462124 83463045 + MGP_BALBcJ_P0055704 Olfr1025-ps1 protein_coding protein_coding MGP_BALBcJ_T0098864.1 MGP_BALBcJ_G0036912.1 mouse_genomes_project 2 1157037 1159302 + Gm38348 sense_intronic sense_intronic MGP_BALBcJ_T0017736.1 MGP_BALBcJ_G0015357.1 mouse_genomes_project 2 49856864 49866722 + A430018G15Rik processed_transcript processed_transcript MGP_BALBcJ_T0017737.1 MGP_BALBcJ_G0015357.1 mouse_genomes_project 2 49856864 49863730 + A430018G15Rik processed_transcript processed_transcript MGP_BALBcJ_T0056304.1 MGP_BALBcJ_G0026157.1 mouse_genomes_project 2 94150862 95470794 + MGP_BALBcJ_P0056304 Lrrc4c protein_coding protein_coding MGP_BALBcJ_T0056305.1 MGP_BALBcJ_G0026157.1 mouse_genomes_project 2 94150909 95470111 + MGP_BALBcJ_P0056305 Lrrc4c protein_coding protein_coding MGP_BALBcJ_T0056306.1 MGP_BALBcJ_G0026157.1 mouse_genomes_project 2 95306293 95470792 + MGP_BALBcJ_P0056306 Lrrc4c protein_coding protein_coding MGP_BALBcJ_T0056307.1 MGP_BALBcJ_G0026157.1 mouse_genomes_project 2 95306726 95468191 + MGP_BALBcJ_P0056307 Lrrc4c protein_coding protein_coding MGP_BALBcJ_T0010397.1 MGP_BALBcJ_G0008522.1 mouse_genomes_project 2 49713065 49713215 + Gm22095 miRNA miRNA MGP_BALBcJ_T0004110.1 MGP_BALBcJ_G0003637.1 mouse_genomes_project 2 150672203 150674157 - AA387200 antisense antisense MGP_BALBcJ_T0004159.1 MGP_BALBcJ_G0003677.1 mouse_genomes_project 2 171118803 171123341 + Gm14271 antisense antisense MGP_BALBcJ_T0007289.1 MGP_BALBcJ_G0005973.1 mouse_genomes_project 2 115847194 115931059 + 4930412B13Rik lincRNA lincRNA MGP_BALBcJ_T0017742.1 MGP_BALBcJ_G0015361.1 mouse_genomes_project 2 56746378 56750559 - 5330411J11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017743.1 MGP_BALBcJ_G0015361.1 mouse_genomes_project 2 56747669 56751342 - 5330411J11Rik processed_transcript processed_transcript MGP_BALBcJ_T0058922.1 MGP_BALBcJ_G0026777.1 mouse_genomes_project 2 159155909 159158138 - MGP_BALBcJ_P0058922 Gm826 protein_coding protein_coding MGP_BALBcJ_T0058923.1 MGP_BALBcJ_G0026777.1 mouse_genomes_project 2 159156260 159179484 - Gm826 protein_coding processed_transcript MGP_BALBcJ_T0058924.1 MGP_BALBcJ_G0026777.1 mouse_genomes_project 2 159156377 159172818 - MGP_BALBcJ_P0058924 Gm826 protein_coding protein_coding MGP_BALBcJ_T0013398.1 MGP_BALBcJ_G0011495.1 mouse_genomes_project 2 6574696 6575204 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100980.1 MGP_BALBcJ_G0039016.1 mouse_genomes_project 2 128672477 128672610 + Gm24451 snoRNA snoRNA MGP_BALBcJ_T0013703.1 MGP_BALBcJ_G0011800.1 mouse_genomes_project 2 112683020 112683802 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059916.1 MGP_BALBcJ_G0027009.1 mouse_genomes_project 2 181032916 181034566 - MGP_BALBcJ_P0059916 Lkaaear1 protein_coding protein_coding MGP_BALBcJ_T0059917.1 MGP_BALBcJ_G0027009.1 mouse_genomes_project 2 181032919 181033540 - MGP_BALBcJ_P0059917 Lkaaear1 protein_coding protein_coding MGP_BALBcJ_T0056963.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118373472 118410716 - MGP_BALBcJ_P0056963 Vps39 protein_coding protein_coding MGP_BALBcJ_T0056964.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118373472 118410704 - MGP_BALBcJ_P0056964 Vps39 protein_coding protein_coding MGP_BALBcJ_T0056965.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118373822 118410700 - Vps39 protein_coding processed_transcript MGP_BALBcJ_T0056966.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118375038 118376594 - Vps39 protein_coding retained_intron MGP_BALBcJ_T0056967.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118376857 118380991 - Vps39 protein_coding retained_intron MGP_BALBcJ_T0056968.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118379355 118410688 - Vps39 protein_coding retained_intron MGP_BALBcJ_T0056969.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118383368 118391137 - Vps39 protein_coding retained_intron MGP_BALBcJ_T0056970.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118396119 118401805 - Vps39 protein_coding processed_transcript MGP_BALBcJ_T0056971.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118400851 118410700 - Vps39 protein_coding processed_transcript MGP_BALBcJ_T0056972.1 MGP_BALBcJ_G0026338.1 mouse_genomes_project 2 118406050 118410704 - Vps39 protein_coding processed_transcript MGP_BALBcJ_T0052260.1 MGP_BALBcJ_G0025275.1 mouse_genomes_project 2 217801 263503 + MGP_BALBcJ_P0052260 Nmt2 protein_coding protein_coding MGP_BALBcJ_T0052261.1 MGP_BALBcJ_G0025275.1 mouse_genomes_project 2 217825 243922 + Nmt2 protein_coding processed_transcript MGP_BALBcJ_T0052262.1 MGP_BALBcJ_G0025275.1 mouse_genomes_project 2 217841 265665 + MGP_BALBcJ_P0052262 Nmt2 protein_coding protein_coding MGP_BALBcJ_T0013464.1 MGP_BALBcJ_G0011561.1 mouse_genomes_project 2 30939862 30940272 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054459.1 MGP_BALBcJ_G0025655.1 mouse_genomes_project 2 34223627 34224560 - MGP_BALBcJ_P0054459 Olfr355 protein_coding protein_coding MGP_BALBcJ_T0001043.1 MGP_BALBcJ_G0000971.1 mouse_genomes_project 2 11790363 11793037 + TEC TEC MGP_BALBcJ_T0013845.1 MGP_BALBcJ_G0011942.1 mouse_genomes_project 2 166039448 166040004 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054882.1 MGP_BALBcJ_G0025733.1 mouse_genomes_project 2 57813749 57950726 - MGP_BALBcJ_P0054882 Pla2r1 protein_coding protein_coding MGP_BALBcJ_T0054883.1 MGP_BALBcJ_G0025733.1 mouse_genomes_project 2 57816231 57821124 - Pla2r1 protein_coding processed_transcript MGP_BALBcJ_T0054884.1 MGP_BALBcJ_G0025733.1 mouse_genomes_project 2 57837680 57840215 - Pla2r1 protein_coding retained_intron MGP_BALBcJ_T0054885.1 MGP_BALBcJ_G0025733.1 mouse_genomes_project 2 57847889 57950726 - Pla2r1 protein_coding retained_intron MGP_BALBcJ_T0054886.1 MGP_BALBcJ_G0025733.1 mouse_genomes_project 2 57848760 57852023 - Pla2r1 protein_coding retained_intron MGP_BALBcJ_T0054887.1 MGP_BALBcJ_G0025733.1 mouse_genomes_project 2 57930234 57950726 - Pla2r1 protein_coding retained_intron MGP_BALBcJ_T0055801.1 MGP_BALBcJ_G0026004.1 mouse_genomes_project 2 85600135 85601068 + MGP_BALBcJ_P0055801 Olfr1152 protein_coding protein_coding MGP_BALBcJ_T0011478.1 MGP_BALBcJ_G0009603.1 mouse_genomes_project 2 42622292 42622493 + Vis1 misc_RNA misc_RNA MGP_BALBcJ_T0098569.1 MGP_BALBcJ_G0036623.1 mouse_genomes_project 2 72506879 72506979 - n-R5s198 rRNA rRNA MGP_BALBcJ_T0059291.1 MGP_BALBcJ_G0026874.1 mouse_genomes_project 2 164922705 165002165 + MGP_BALBcJ_P0059291 Ncoa3 protein_coding protein_coding MGP_BALBcJ_T0059292.1 MGP_BALBcJ_G0026874.1 mouse_genomes_project 2 164922706 165004178 + MGP_BALBcJ_P0059292 Ncoa3 protein_coding protein_coding MGP_BALBcJ_T0059293.1 MGP_BALBcJ_G0026874.1 mouse_genomes_project 2 164978176 164982634 + Ncoa3 protein_coding processed_transcript MGP_BALBcJ_T0059294.1 MGP_BALBcJ_G0026874.1 mouse_genomes_project 2 164991343 164996915 + Ncoa3 protein_coding retained_intron MGP_BALBcJ_T0059295.1 MGP_BALBcJ_G0026874.1 mouse_genomes_project 2 164998151 165000898 + Ncoa3 protein_coding retained_intron MGP_BALBcJ_T0053961.1 MGP_BALBcJ_G0025566.1 mouse_genomes_project 2 29143807 29204950 + MGP_BALBcJ_P0053961 Lamc3 protein_coding protein_coding MGP_BALBcJ_T0053962.1 MGP_BALBcJ_G0025566.1 mouse_genomes_project 2 29143860 29206243 + MGP_BALBcJ_P0053962 Lamc3 protein_coding protein_coding MGP_BALBcJ_T0053963.1 MGP_BALBcJ_G0025566.1 mouse_genomes_project 2 29184896 29185535 + Lamc3 protein_coding processed_transcript MGP_BALBcJ_T0055761.1 MGP_BALBcJ_G0025974.1 mouse_genomes_project 2 84953974 84954970 + MGP_BALBcJ_P0055761 Olfr1116 protein_coding protein_coding MGP_BALBcJ_T0099680.1 MGP_BALBcJ_G0037716.1 mouse_genomes_project 2 72192573 72192680 + Gm22975 snRNA snRNA MGP_BALBcJ_T0053720.1 MGP_BALBcJ_G0025529.1 mouse_genomes_project 2 27361934 27371227 + MGP_BALBcJ_P0053720 Slc39a1 protein_coding protein_coding MGP_BALBcJ_T0056394.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101643578 101685803 - MGP_BALBcJ_P0056394 Nat10 protein_coding protein_coding MGP_BALBcJ_T0056395.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101643582 101685774 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056396.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101643582 101685774 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056397.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101643582 101685730 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056398.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101643983 101646752 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056399.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101644249 101685737 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056400.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101654130 101656802 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056401.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101654325 101655568 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056402.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101656647 101664853 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056403.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101661052 101685803 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056404.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101671849 101685459 - MGP_BALBcJ_P0056404 Nat10 protein_coding protein_coding MGP_BALBcJ_T0056405.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101674642 101685794 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056406.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101678699 101685728 - Nat10 protein_coding retained_intron MGP_BALBcJ_T0056407.1 MGP_BALBcJ_G0026176.1 mouse_genomes_project 2 101678836 101680016 - MGP_BALBcJ_P0056407 Nat10 protein_coding protein_coding MGP_BALBcJ_T0013610.1 MGP_BALBcJ_G0011707.1 mouse_genomes_project 2 81112140 81112281 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098869.1 MGP_BALBcJ_G0036917.1 mouse_genomes_project 2 56128835 56160633 + Gm13558 sense_intronic sense_intronic MGP_BALBcJ_T0055718.1 MGP_BALBcJ_G0025932.1 mouse_genomes_project 2 83774003 83774951 - MGP_BALBcJ_P0055718 Olfr1045 protein_coding protein_coding MGP_BALBcJ_T0007395.1 MGP_BALBcJ_G0006061.1 mouse_genomes_project 2 169235192 169236797 - Gm17619 lincRNA lincRNA MGP_BALBcJ_T0052799.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19907115 19924291 + Pdss1 protein_coding processed_transcript MGP_BALBcJ_T0052800.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19907115 19952209 + MGP_BALBcJ_P0052800 Pdss1 protein_coding protein_coding MGP_BALBcJ_T0052801.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19907188 19927805 + MGP_BALBcJ_P0052801 Pdss1 protein_coding protein_coding MGP_BALBcJ_T0052802.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19907212 19913422 + MGP_BALBcJ_P0052802 Pdss1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052803.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19907641 19918416 + MGP_BALBcJ_P0052803 Pdss1 protein_coding protein_coding MGP_BALBcJ_T0052804.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19946042 19952198 + Pdss1 protein_coding retained_intron MGP_BALBcJ_T0052805.1 MGP_BALBcJ_G0025366.1 mouse_genomes_project 2 19947478 19952185 + MGP_BALBcJ_P0052805 Pdss1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053876.1 MGP_BALBcJ_G0025553.1 mouse_genomes_project 2 28214707 28225475 - MGP_BALBcJ_P0053876 BC005624 protein_coding unknown_likely_coding MGP_BALBcJ_T0053877.1 MGP_BALBcJ_G0025553.1 mouse_genomes_project 2 28217507 28224121 - BC005624 protein_coding retained_intron MGP_BALBcJ_T0053878.1 MGP_BALBcJ_G0025553.1 mouse_genomes_project 2 28224517 28225816 - BC005624 protein_coding retained_intron MGP_BALBcJ_T0004089.1 MGP_BALBcJ_G0003620.1 mouse_genomes_project 2 139738891 139744516 - Macrod2os2 antisense antisense MGP_BALBcJ_T0004091.1 MGP_BALBcJ_G0003620.1 mouse_genomes_project 2 139741205 139741592 - Macrod2os2 antisense antisense MGP_BALBcJ_T0013545.1 MGP_BALBcJ_G0011642.1 mouse_genomes_project 2 57987863 57989005 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017836.1 MGP_BALBcJ_G0015411.1 mouse_genomes_project 2 129292312 129324301 - A730017L22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017837.1 MGP_BALBcJ_G0015411.1 mouse_genomes_project 2 129298600 129324261 - A730017L22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017838.1 MGP_BALBcJ_G0015411.1 mouse_genomes_project 2 129302518 129324284 - A730017L22Rik processed_transcript processed_transcript MGP_BALBcJ_T0013481.1 MGP_BALBcJ_G0011578.1 mouse_genomes_project 2 36238905 36239459 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007153.1 MGP_BALBcJ_G0005863.1 mouse_genomes_project 2 30775797 30789608 + Gm13530 lincRNA lincRNA MGP_BALBcJ_T0056620.1 MGP_BALBcJ_G0026240.1 mouse_genomes_project 2 109640078 109641017 - MGP_BALBcJ_P0056620 protein_coding protein_coding MGP_BALBcJ_T0003901.1 MGP_BALBcJ_G0003490.1 mouse_genomes_project 2 22717285 22742227 + Fcnaos antisense antisense MGP_BALBcJ_T0003902.1 MGP_BALBcJ_G0003490.1 mouse_genomes_project 2 22725623 22742227 + Fcnaos antisense antisense MGP_BALBcJ_T0003903.1 MGP_BALBcJ_G0003490.1 mouse_genomes_project 2 22738081 22742228 + Fcnaos antisense antisense MGP_BALBcJ_T0003904.1 MGP_BALBcJ_G0003490.1 mouse_genomes_project 2 22741114 22742230 + Fcnaos antisense antisense MGP_BALBcJ_T0056865.1 MGP_BALBcJ_G0026317.1 mouse_genomes_project 2 117415121 117519344 - MGP_BALBcJ_P0056865 Ino80 protein_coding protein_coding MGP_BALBcJ_T0056866.1 MGP_BALBcJ_G0026317.1 mouse_genomes_project 2 117444164 117519270 - MGP_BALBcJ_P0056866 Ino80 protein_coding protein_coding MGP_BALBcJ_T0056867.1 MGP_BALBcJ_G0026317.1 mouse_genomes_project 2 117475396 117481928 - Ino80 protein_coding retained_intron MGP_BALBcJ_T0101666.1 MGP_BALBcJ_G0039659.1 mouse_genomes_project 2 36483435 36488769 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101667.1 MGP_BALBcJ_G0039659.1 mouse_genomes_project 2 36487166 36488523 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0007276.1 MGP_BALBcJ_G0005965.1 mouse_genomes_project 2 113502347 113521055 - 3110099E03Rik lincRNA lincRNA MGP_BALBcJ_T0007277.1 MGP_BALBcJ_G0005965.1 mouse_genomes_project 2 113503860 113536813 - 3110099E03Rik lincRNA lincRNA MGP_BALBcJ_T0007278.1 MGP_BALBcJ_G0005965.1 mouse_genomes_project 2 113504565 113521061 - 3110099E03Rik lincRNA lincRNA MGP_BALBcJ_T0058776.1 MGP_BALBcJ_G0026748.1 mouse_genomes_project 2 155777867 155789665 - MGP_BALBcJ_P0058776 Dsn1 protein_coding protein_coding MGP_BALBcJ_T0058777.1 MGP_BALBcJ_G0026748.1 mouse_genomes_project 2 155777879 155789744 - MGP_BALBcJ_P0058777 Dsn1 protein_coding protein_coding MGP_BALBcJ_T0058778.1 MGP_BALBcJ_G0026748.1 mouse_genomes_project 2 155780326 155789620 - MGP_BALBcJ_P0058778 Dsn1 protein_coding protein_coding MGP_BALBcJ_T0058779.1 MGP_BALBcJ_G0026748.1 mouse_genomes_project 2 155784287 155785846 - Dsn1 protein_coding retained_intron MGP_BALBcJ_T0058780.1 MGP_BALBcJ_G0026748.1 mouse_genomes_project 2 155785329 155788891 - MGP_BALBcJ_P0058780 Dsn1 protein_coding protein_coding MGP_BALBcJ_T0058781.1 MGP_BALBcJ_G0026748.1 mouse_genomes_project 2 155787909 155789164 - MGP_BALBcJ_P0058781 Dsn1 protein_coding protein_coding MGP_BALBcJ_T0059485.1 MGP_BALBcJ_G0026918.1 mouse_genomes_project 2 171440914 171455240 - MGP_BALBcJ_P0059485 Aurka protein_coding protein_coding MGP_BALBcJ_T0059486.1 MGP_BALBcJ_G0026918.1 mouse_genomes_project 2 171440920 171455211 - MGP_BALBcJ_P0059486 Aurka protein_coding protein_coding MGP_BALBcJ_T0059487.1 MGP_BALBcJ_G0026918.1 mouse_genomes_project 2 171441890 171447838 - Aurka protein_coding retained_intron MGP_BALBcJ_T0059488.1 MGP_BALBcJ_G0026918.1 mouse_genomes_project 2 171451255 171455226 - Aurka protein_coding retained_intron MGP_BALBcJ_T0013736.1 MGP_BALBcJ_G0011833.1 mouse_genomes_project 2 129422698 129423313 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056606.1 MGP_BALBcJ_G0026226.1 mouse_genomes_project 2 109217612 109218619 + MGP_BALBcJ_P0056606 Olfr1278 protein_coding protein_coding MGP_BALBcJ_T0054119.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29872819 29892514 + MGP_BALBcJ_P0054119 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054120.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29872836 29891567 + MGP_BALBcJ_P0054120 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054121.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29880112 29893791 + MGP_BALBcJ_P0054121 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054122.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29880126 29893791 + MGP_BALBcJ_P0054122 St6galnac6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054123.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29881157 29893789 + MGP_BALBcJ_P0054123 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054124.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29881171 29889822 + St6galnac6 protein_coding retained_intron MGP_BALBcJ_T0054125.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29881550 29893789 + MGP_BALBcJ_P0054125 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054126.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29881803 29885414 + MGP_BALBcJ_P0054126 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054127.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29882099 29887967 + MGP_BALBcJ_P0054127 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054128.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29882129 29887987 + MGP_BALBcJ_P0054128 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0054129.1 MGP_BALBcJ_G0025588.1 mouse_genomes_project 2 29882388 29893798 + MGP_BALBcJ_P0054129 St6galnac6 protein_coding protein_coding MGP_BALBcJ_T0058864.1 MGP_BALBcJ_G0026764.1 mouse_genomes_project 2 156937271 156968339 - MGP_BALBcJ_P0058864 Tgm2 protein_coding protein_coding MGP_BALBcJ_T0058865.1 MGP_BALBcJ_G0026764.1 mouse_genomes_project 2 156948207 156968296 - MGP_BALBcJ_P0058865 Tgm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058866.1 MGP_BALBcJ_G0026764.1 mouse_genomes_project 2 156951242 156968269 - Tgm2 protein_coding retained_intron MGP_BALBcJ_T0058867.1 MGP_BALBcJ_G0026764.1 mouse_genomes_project 2 156955184 156961229 - Tgm2 protein_coding processed_transcript MGP_BALBcJ_T0055894.1 MGP_BALBcJ_G0026083.1 mouse_genomes_project 2 87635642 87641827 - MGP_BALBcJ_P0055894 Olfr1256 protein_coding protein_coding MGP_BALBcJ_T0055895.1 MGP_BALBcJ_G0026083.1 mouse_genomes_project 2 87635642 87636563 - MGP_BALBcJ_P0055895 Olfr1256 protein_coding protein_coding MGP_BALBcJ_T0013611.1 MGP_BALBcJ_G0011708.1 mouse_genomes_project 2 81295792 81297045 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010372.1 MGP_BALBcJ_G0008497.1 mouse_genomes_project 2 24601329 24601411 - Mir7578 miRNA miRNA MGP_BALBcJ_T0055224.1 MGP_BALBcJ_G0025796.1 mouse_genomes_project 2 69029876 69035744 + MGP_BALBcJ_P0055224 Dlx1 protein_coding protein_coding MGP_BALBcJ_T0055225.1 MGP_BALBcJ_G0025796.1 mouse_genomes_project 2 69030446 69031829 + MGP_BALBcJ_P0055225 Dlx1 protein_coding protein_coding MGP_BALBcJ_T0055226.1 MGP_BALBcJ_G0025796.1 mouse_genomes_project 2 69030864 69031995 + MGP_BALBcJ_P0055226 Dlx1 protein_coding protein_coding MGP_BALBcJ_T0055227.1 MGP_BALBcJ_G0025796.1 mouse_genomes_project 2 69031616 69034283 + MGP_BALBcJ_P0055227 Dlx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055228.1 MGP_BALBcJ_G0025796.1 mouse_genomes_project 2 69031710 69035745 + Dlx1 protein_coding retained_intron MGP_BALBcJ_T0055229.1 MGP_BALBcJ_G0025796.1 mouse_genomes_project 2 69032543 69034453 + Dlx1 protein_coding retained_intron MGP_BALBcJ_T0013829.1 MGP_BALBcJ_G0011926.1 mouse_genomes_project 2 158700297 158701163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055712.1 MGP_BALBcJ_G0025926.1 mouse_genomes_project 2 83723143 83724462 - MGP_BALBcJ_P0055712 protein_coding protein_coding MGP_BALBcJ_T0102422.1 MGP_BALBcJ_G0040238.1 mouse_genomes_project 2 85833662 85834613 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013578.1 MGP_BALBcJ_G0011675.1 mouse_genomes_project 2 70698355 70699154 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055566.1 MGP_BALBcJ_G0025869.1 mouse_genomes_project 2 81851225 81948806 - MGP_BALBcJ_P0055566 Calcrl protein_coding protein_coding MGP_BALBcJ_T0055567.1 MGP_BALBcJ_G0025869.1 mouse_genomes_project 2 81851258 81897959 - MGP_BALBcJ_P0055567 Calcrl protein_coding protein_coding MGP_BALBcJ_T0055568.1 MGP_BALBcJ_G0025869.1 mouse_genomes_project 2 81897895 81948661 - Calcrl protein_coding processed_transcript MGP_BALBcJ_T0059950.1 MGP_BALBcJ_G0027015.1 mouse_genomes_project 2 181333987 181342230 + MGP_BALBcJ_P0059950 Gm14496 protein_coding protein_coding MGP_BALBcJ_T0054366.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32484618 32505204 - MGP_BALBcJ_P0054366 Rab14 protein_coding protein_coding MGP_BALBcJ_T0054367.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32484618 32505204 - MGP_BALBcJ_P0054367 Rab14 protein_coding protein_coding MGP_BALBcJ_T0054368.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32486212 32488134 - Rab14 protein_coding processed_transcript MGP_BALBcJ_T0054369.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32487273 32488232 - Rab14 protein_coding processed_transcript MGP_BALBcJ_T0054370.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32487686 32505056 - Rab14 protein_coding retained_intron MGP_BALBcJ_T0054371.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32490368 32496747 - Rab14 protein_coding processed_transcript MGP_BALBcJ_T0054372.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32491789 32495506 - Rab14 protein_coding retained_intron MGP_BALBcJ_T0054373.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32493983 32504873 - Rab14 protein_coding processed_transcript MGP_BALBcJ_T0054374.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32495604 32496927 - Rab14 protein_coding processed_transcript MGP_BALBcJ_T0054375.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32500063 32505066 - Rab14 protein_coding retained_intron MGP_BALBcJ_T0054376.1 MGP_BALBcJ_G0025624.1 mouse_genomes_project 2 32503957 32505062 - Rab14 protein_coding processed_transcript MGP_BALBcJ_T0007238.1 MGP_BALBcJ_G0005934.1 mouse_genomes_project 2 90304582 90351900 + Gm13814 lincRNA lincRNA MGP_BALBcJ_T0054546.1 MGP_BALBcJ_G0025678.1 mouse_genomes_project 2 36231574 36263549 + MGP_BALBcJ_P0054546 Olfml2a protein_coding protein_coding MGP_BALBcJ_T0056912.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952177 118026579 + MGP_BALBcJ_P0056912 Mga protein_coding protein_coding MGP_BALBcJ_T0056913.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952177 118024281 + MGP_BALBcJ_P0056913 Mga protein_coding protein_coding MGP_BALBcJ_T0056914.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952177 118026579 + MGP_BALBcJ_P0056914 Mga protein_coding protein_coding MGP_BALBcJ_T0056915.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952177 118026579 + MGP_BALBcJ_P0056915 Mga protein_coding protein_coding MGP_BALBcJ_T0056916.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952181 117972718 + Mga protein_coding retained_intron MGP_BALBcJ_T0056917.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952187 118024279 + MGP_BALBcJ_P0056917 Mga protein_coding unknown_likely_coding MGP_BALBcJ_T0056918.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952197 117981420 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056919.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117952254 118017375 + MGP_BALBcJ_P0056919 Mga protein_coding protein_coding MGP_BALBcJ_T0056920.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117976440 117978836 + Mga protein_coding retained_intron MGP_BALBcJ_T0056921.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117989911 117993500 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056922.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117990080 118001372 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056923.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117990175 117996462 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056924.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117996171 118002120 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056925.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 117996675 118001913 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056926.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 118014894 118021895 + Mga protein_coding processed_transcript MGP_BALBcJ_T0056927.1 MGP_BALBcJ_G0026328.1 mouse_genomes_project 2 118016985 118018804 + Mga protein_coding retained_intron MGP_BALBcJ_T0057343.1 MGP_BALBcJ_G0026408.1 mouse_genomes_project 2 123978271 124024016 - MGP_BALBcJ_P0057343 Secisbp2l protein_coding protein_coding MGP_BALBcJ_T0057344.1 MGP_BALBcJ_G0026408.1 mouse_genomes_project 2 123986039 124001593 - MGP_BALBcJ_P0057344 Secisbp2l protein_coding protein_coding MGP_BALBcJ_T0057345.1 MGP_BALBcJ_G0026408.1 mouse_genomes_project 2 123991649 123993540 - Secisbp2l protein_coding retained_intron MGP_BALBcJ_T0057237.1 MGP_BALBcJ_G0026376.1 mouse_genomes_project 2 120121939 120151701 + MGP_BALBcJ_P0057237 protein_coding protein_coding MGP_BALBcJ_T0057239.1 MGP_BALBcJ_G0026376.1 mouse_genomes_project 2 120122045 120122722 + protein_coding processed_transcript MGP_BALBcJ_T0058047.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144427743 144440226 + MGP_BALBcJ_P0058047 Naa20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058048.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144427747 144440232 + MGP_BALBcJ_P0058048 Naa20 protein_coding protein_coding MGP_BALBcJ_T0058049.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144427752 144440306 + MGP_BALBcJ_P0058049 Naa20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058050.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144427755 144440564 + MGP_BALBcJ_P0058050 Naa20 protein_coding protein_coding MGP_BALBcJ_T0058051.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144427784 144435064 + MGP_BALBcJ_P0058051 Naa20 protein_coding protein_coding MGP_BALBcJ_T0058052.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144427787 144436669 + Naa20 protein_coding retained_intron MGP_BALBcJ_T0058053.1 MGP_BALBcJ_G0026571.1 mouse_genomes_project 2 144436559 144440409 + Naa20 protein_coding retained_intron MGP_BALBcJ_T0056851.1 MGP_BALBcJ_G0026311.1 mouse_genomes_project 2 117257975 117271063 - MGP_BALBcJ_P0056851 Ppp1r14d protein_coding protein_coding MGP_BALBcJ_T0056852.1 MGP_BALBcJ_G0026311.1 mouse_genomes_project 2 117257996 117271022 - MGP_BALBcJ_P0056852 Ppp1r14d protein_coding protein_coding MGP_BALBcJ_T0059020.1 MGP_BALBcJ_G0026800.1 mouse_genomes_project 2 162379471 162419159 + MGP_BALBcJ_P0059020 Hnf4a protein_coding protein_coding MGP_BALBcJ_T0059021.1 MGP_BALBcJ_G0026800.1 mouse_genomes_project 2 162413056 162427241 + Hnf4a protein_coding processed_transcript MGP_BALBcJ_T0059022.1 MGP_BALBcJ_G0026800.1 mouse_genomes_project 2 162413426 162441399 + MGP_BALBcJ_P0059022 Hnf4a protein_coding protein_coding MGP_BALBcJ_T0059023.1 MGP_BALBcJ_G0026800.1 mouse_genomes_project 2 162413427 162441394 + MGP_BALBcJ_P0059023 Hnf4a protein_coding protein_coding MGP_BALBcJ_T0059024.1 MGP_BALBcJ_G0026800.1 mouse_genomes_project 2 162416588 162427240 + MGP_BALBcJ_P0059024 Hnf4a protein_coding protein_coding MGP_BALBcJ_T0010476.1 MGP_BALBcJ_G0008601.1 mouse_genomes_project 2 180207218 180207286 + Mir124a-3 miRNA miRNA MGP_BALBcJ_T0013640.1 MGP_BALBcJ_G0011737.1 mouse_genomes_project 2 89519991 89521249 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054114.1 MGP_BALBcJ_G0025587.1 mouse_genomes_project 2 29860205 29872809 + MGP_BALBcJ_P0054114 St6galnac4 protein_coding protein_coding MGP_BALBcJ_T0054115.1 MGP_BALBcJ_G0025587.1 mouse_genomes_project 2 29860249 29867386 + St6galnac4 protein_coding retained_intron MGP_BALBcJ_T0054116.1 MGP_BALBcJ_G0025587.1 mouse_genomes_project 2 29860691 29870812 + St6galnac4 protein_coding retained_intron MGP_BALBcJ_T0054117.1 MGP_BALBcJ_G0025587.1 mouse_genomes_project 2 29860735 29872186 + MGP_BALBcJ_P0054117 St6galnac4 protein_coding protein_coding MGP_BALBcJ_T0054118.1 MGP_BALBcJ_G0025587.1 mouse_genomes_project 2 29867386 29870300 + MGP_BALBcJ_P0054118 St6galnac4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059139.1 MGP_BALBcJ_G0026847.1 mouse_genomes_project 2 163667365 163670375 + MGP_BALBcJ_P0059139 Ube2c protein_coding protein_coding MGP_BALBcJ_T0059140.1 MGP_BALBcJ_G0026847.1 mouse_genomes_project 2 163667370 163676222 + MGP_BALBcJ_P0059140 Ube2c protein_coding protein_coding MGP_BALBcJ_T0013656.1 MGP_BALBcJ_G0011753.1 mouse_genomes_project 2 97457653 97458281 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013571.1 MGP_BALBcJ_G0011668.1 mouse_genomes_project 2 69293693 69294223 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058353.1 MGP_BALBcJ_G0026664.1 mouse_genomes_project 2 151836080 151839365 - MGP_BALBcJ_P0058353 Tspyl3 protein_coding protein_coding MGP_BALBcJ_T0010360.1 MGP_BALBcJ_G0008485.1 mouse_genomes_project 2 15127589 15127647 + Mir7655 miRNA miRNA MGP_BALBcJ_T0102418.1 MGP_BALBcJ_G0040234.1 mouse_genomes_project 2 85550064 85551001 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0055764.1 MGP_BALBcJ_G0025977.1 mouse_genomes_project 2 85076106 85077051 + MGP_BALBcJ_P0055764 Olfr1121 protein_coding protein_coding MGP_BALBcJ_T0059185.1 MGP_BALBcJ_G0026857.1 mouse_genomes_project 2 163785120 163788743 + Pcif1 protein_coding retained_intron MGP_BALBcJ_T0059186.1 MGP_BALBcJ_G0026857.1 mouse_genomes_project 2 163785181 163800010 + MGP_BALBcJ_P0059186 Pcif1 protein_coding protein_coding MGP_BALBcJ_T0059187.1 MGP_BALBcJ_G0026857.1 mouse_genomes_project 2 163785868 163788654 + Pcif1 protein_coding retained_intron MGP_BALBcJ_T0059188.1 MGP_BALBcJ_G0026857.1 mouse_genomes_project 2 163789476 163790238 + Pcif1 protein_coding retained_intron MGP_BALBcJ_T0053180.1 MGP_BALBcJ_G0025432.1 mouse_genomes_project 2 22718028 22727746 - MGP_BALBcJ_P0053180 Ccdc183 protein_coding protein_coding MGP_BALBcJ_T0053181.1 MGP_BALBcJ_G0025432.1 mouse_genomes_project 2 22718086 22727727 - Ccdc183 protein_coding processed_transcript MGP_BALBcJ_T0007132.1 MGP_BALBcJ_G0005848.1 mouse_genomes_project 2 21377679 21378212 + Gm13411 lincRNA lincRNA MGP_BALBcJ_T0017779.1 MGP_BALBcJ_G0015386.1 mouse_genomes_project 2 91813217 91816759 + Alkbh3os1 processed_transcript processed_transcript MGP_BALBcJ_T0056572.1 MGP_BALBcJ_G0026211.1 mouse_genomes_project 2 107816220 107826364 + MGP_BALBcJ_P0056572 Lin7c protein_coding protein_coding MGP_BALBcJ_T0056573.1 MGP_BALBcJ_G0026211.1 mouse_genomes_project 2 107816237 107822100 + Lin7c protein_coding retained_intron MGP_BALBcJ_T0055562.1 MGP_BALBcJ_G0025867.1 mouse_genomes_project 2 81471637 81496440 - MGP_BALBcJ_P0055562 Zswim2 protein_coding protein_coding MGP_BALBcJ_T0055563.1 MGP_BALBcJ_G0025867.1 mouse_genomes_project 2 81473327 81496442 - MGP_BALBcJ_P0055563 Zswim2 protein_coding protein_coding MGP_BALBcJ_T0055564.1 MGP_BALBcJ_G0025867.1 mouse_genomes_project 2 81479973 81480411 - Zswim2 protein_coding processed_transcript MGP_BALBcJ_T0013680.1 MGP_BALBcJ_G0011777.1 mouse_genomes_project 2 104962754 104963252 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058672.1 MGP_BALBcJ_G0026732.1 mouse_genomes_project 2 154857920 154877914 - MGP_BALBcJ_P0058672 Rbm12 protein_coding protein_coding MGP_BALBcJ_T0058673.1 MGP_BALBcJ_G0026732.1 mouse_genomes_project 2 154857920 154877914 - MGP_BALBcJ_P0058673 Rbm12 protein_coding protein_coding MGP_BALBcJ_T0058674.1 MGP_BALBcJ_G0026732.1 mouse_genomes_project 2 154863477 154877874 - MGP_BALBcJ_P0058674 Rbm12 protein_coding protein_coding MGP_BALBcJ_T0058675.1 MGP_BALBcJ_G0026732.1 mouse_genomes_project 2 154863913 154877936 - MGP_BALBcJ_P0058675 Rbm12 protein_coding protein_coding MGP_BALBcJ_T0058676.1 MGP_BALBcJ_G0026732.1 mouse_genomes_project 2 154863942 154877919 - MGP_BALBcJ_P0058676 Rbm12 protein_coding protein_coding MGP_BALBcJ_T0013416.1 MGP_BALBcJ_G0011513.1 mouse_genomes_project 2 13025396 13026009 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013525.1 MGP_BALBcJ_G0011622.1 mouse_genomes_project 2 51787892 51788443 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013698.1 MGP_BALBcJ_G0011795.1 mouse_genomes_project 2 109906582 109915498 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001079.1 MGP_BALBcJ_G0001007.1 mouse_genomes_project 2 66435332 66439335 + TEC TEC MGP_BALBcJ_T0004077.1 MGP_BALBcJ_G0003614.1 mouse_genomes_project 2 130938912 130960242 + 1700026D11Rik antisense antisense MGP_BALBcJ_T0004078.1 MGP_BALBcJ_G0003614.1 mouse_genomes_project 2 130938994 130960283 + 1700026D11Rik antisense antisense MGP_BALBcJ_T0004079.1 MGP_BALBcJ_G0003614.1 mouse_genomes_project 2 130938994 130961843 + 1700026D11Rik antisense antisense MGP_BALBcJ_T0004080.1 MGP_BALBcJ_G0003614.1 mouse_genomes_project 2 130939006 130971998 + 1700026D11Rik antisense antisense MGP_BALBcJ_T0004081.1 MGP_BALBcJ_G0003614.1 mouse_genomes_project 2 130939022 130960243 + 1700026D11Rik antisense antisense MGP_BALBcJ_T0004082.1 MGP_BALBcJ_G0003614.1 mouse_genomes_project 2 130939022 130971799 + 1700026D11Rik antisense antisense MGP_BALBcJ_T0013702.1 MGP_BALBcJ_G0011799.1 mouse_genomes_project 2 111368513 111369038 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058145.1 MGP_BALBcJ_G0026602.1 mouse_genomes_project 2 148961619 148962151 + MGP_BALBcJ_P0058145 Gm10130 protein_coding protein_coding MGP_BALBcJ_T0007274.1 MGP_BALBcJ_G0005963.1 mouse_genomes_project 2 113334395 113350128 - 4930528P14Rik lincRNA lincRNA MGP_BALBcJ_T0056532.1 MGP_BALBcJ_G0026202.1 mouse_genomes_project 2 103860952 103915966 + MGP_BALBcJ_P0056532 Immp1l protein_coding protein_coding MGP_BALBcJ_T0013386.1 MGP_BALBcJ_G0011483.1 mouse_genomes_project 2 991652 992949 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013564.1 MGP_BALBcJ_G0011661.1 mouse_genomes_project 2 66780561 66781063 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003872.1 MGP_BALBcJ_G0003465.1 mouse_genomes_project 2 1535102 1536366 - Gm13179 antisense antisense MGP_BALBcJ_T0003873.1 MGP_BALBcJ_G0003465.1 mouse_genomes_project 2 1535406 1536366 - Gm13179 antisense antisense MGP_BALBcJ_T0055716.1 MGP_BALBcJ_G0025930.1 mouse_genomes_project 2 83748772 83749717 - MGP_BALBcJ_P0055716 Olfr1044 protein_coding protein_coding MGP_BALBcJ_T0054296.1 MGP_BALBcJ_G0025614.1 mouse_genomes_project 2 32070641 32076219 + MGP_BALBcJ_P0054296 Hspa5 protein_coding protein_coding MGP_BALBcJ_T0054297.1 MGP_BALBcJ_G0025614.1 mouse_genomes_project 2 32070766 32075203 + MGP_BALBcJ_P0054297 Hspa5 protein_coding protein_coding MGP_BALBcJ_T0054298.1 MGP_BALBcJ_G0025614.1 mouse_genomes_project 2 32070770 32071979 + MGP_BALBcJ_P0054298 Hspa5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054299.1 MGP_BALBcJ_G0025614.1 mouse_genomes_project 2 32071252 32072864 + Hspa5 protein_coding retained_intron MGP_BALBcJ_T0054300.1 MGP_BALBcJ_G0025614.1 mouse_genomes_project 2 32072337 32073005 + Hspa5 protein_coding retained_intron MGP_BALBcJ_T0054301.1 MGP_BALBcJ_G0025614.1 mouse_genomes_project 2 32073518 32074287 + Hspa5 protein_coding retained_intron MGP_BALBcJ_T0056478.1 MGP_BALBcJ_G0026193.1 mouse_genomes_project 2 102774882 102794439 - MGP_BALBcJ_P0056478 Prrg4 protein_coding protein_coding MGP_BALBcJ_T0056479.1 MGP_BALBcJ_G0026193.1 mouse_genomes_project 2 102783566 102794056 - MGP_BALBcJ_P0056479 Prrg4 protein_coding protein_coding MGP_BALBcJ_T0055759.1 MGP_BALBcJ_G0025972.1 mouse_genomes_project 2 84861544 84884797 + MGP_BALBcJ_P0055759 Olfr1113 protein_coding protein_coding MGP_BALBcJ_T0001027.1 MGP_BALBcJ_G0000955.1 mouse_genomes_project 2 9414751 9416153 - TEC TEC MGP_BALBcJ_T0054466.1 MGP_BALBcJ_G0025661.1 mouse_genomes_project 2 34399373 34400327 - MGP_BALBcJ_P0054466 Olfr362 protein_coding protein_coding MGP_BALBcJ_T0099050.1 MGP_BALBcJ_G0037088.1 mouse_genomes_project 2 180298692 180302049 + 9230112E08Rik sense_overlapping sense_overlapping MGP_BALBcJ_T0099051.1 MGP_BALBcJ_G0037088.1 mouse_genomes_project 2 180298999 180300362 + 9230112E08Rik sense_overlapping sense_overlapping MGP_BALBcJ_T0054164.1 MGP_BALBcJ_G0025594.1 mouse_genomes_project 2 30007858 30010117 - 6330409D20Rik protein_coding processed_transcript MGP_BALBcJ_T0054165.1 MGP_BALBcJ_G0025594.1 mouse_genomes_project 2 30007858 30016227 - MGP_BALBcJ_P0054165 6330409D20Rik protein_coding protein_coding MGP_BALBcJ_T0017856.1 MGP_BALBcJ_G0015422.1 mouse_genomes_project 2 155620369 155639159 - 5430405H02Rik processed_transcript antisense MGP_BALBcJ_T0017857.1 MGP_BALBcJ_G0015422.1 mouse_genomes_project 2 155628448 155639090 - 5430405H02Rik processed_transcript antisense MGP_BALBcJ_T0013733.1 MGP_BALBcJ_G0011830.1 mouse_genomes_project 2 128794974 128795802 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055814.1 MGP_BALBcJ_G0026016.1 mouse_genomes_project 2 85859154 85860105 - MGP_BALBcJ_P0055814 Olfr1166 protein_coding protein_coding MGP_BALBcJ_T0056952.1 MGP_BALBcJ_G0026334.1 mouse_genomes_project 2 118145552 118213090 - MGP_BALBcJ_P0056952 Ehd4 protein_coding protein_coding MGP_BALBcJ_T0056953.1 MGP_BALBcJ_G0026334.1 mouse_genomes_project 2 118159865 118187366 - Ehd4 protein_coding processed_transcript MGP_BALBcJ_T0056954.1 MGP_BALBcJ_G0026334.1 mouse_genomes_project 2 118160050 118195528 - Ehd4 protein_coding processed_transcript MGP_BALBcJ_T0056955.1 MGP_BALBcJ_G0026334.1 mouse_genomes_project 2 118180087 118212946 - Ehd4 protein_coding processed_transcript MGP_BALBcJ_T0055268.1 MGP_BALBcJ_G0025803.1 mouse_genomes_project 2 70495728 70542173 - MGP_BALBcJ_P0055268 Sp3 protein_coding protein_coding MGP_BALBcJ_T0055269.1 MGP_BALBcJ_G0025803.1 mouse_genomes_project 2 70495949 70542153 - MGP_BALBcJ_P0055269 Sp3 protein_coding protein_coding MGP_BALBcJ_T0055270.1 MGP_BALBcJ_G0025803.1 mouse_genomes_project 2 70495953 70540195 - Sp3 protein_coding processed_transcript MGP_BALBcJ_T0055271.1 MGP_BALBcJ_G0025803.1 mouse_genomes_project 2 70497607 70500412 - Sp3 protein_coding processed_transcript MGP_BALBcJ_T0055272.1 MGP_BALBcJ_G0025803.1 mouse_genomes_project 2 70505695 70531375 - Sp3 protein_coding processed_transcript MGP_BALBcJ_T0013550.1 MGP_BALBcJ_G0011647.1 mouse_genomes_project 2 59385822 59386141 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0056644.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110277927 110366338 + MGP_BALBcJ_P0056644 Slc12a6 protein_coding protein_coding MGP_BALBcJ_T0056646.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110278844 110363240 + MGP_BALBcJ_P0056646 Slc12a6 protein_coding protein_coding MGP_BALBcJ_T0056647.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110278921 110370367 + MGP_BALBcJ_P0056647 Slc12a6 protein_coding protein_coding MGP_BALBcJ_T0056648.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110297115 110370367 + MGP_BALBcJ_P0056648 Slc12a6 protein_coding protein_coding MGP_BALBcJ_T0056649.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110354247 110358849 + Slc12a6 protein_coding processed_transcript MGP_BALBcJ_T0056650.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110359736 110361449 + Slc12a6 protein_coding processed_transcript MGP_BALBcJ_T0056651.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110361412 110364098 + Slc12a6 protein_coding processed_transcript MGP_BALBcJ_T0056652.1 MGP_BALBcJ_G0026261.1 mouse_genomes_project 2 110363405 110370374 + Slc12a6 protein_coding retained_intron MGP_BALBcJ_T0098570.1 MGP_BALBcJ_G0036624.1 mouse_genomes_project 2 79145568 79145676 - Gm23900 rRNA rRNA MGP_BALBcJ_T0056859.1 MGP_BALBcJ_G0026314.1 mouse_genomes_project 2 117330137 117336878 + Vps18 protein_coding retained_intron MGP_BALBcJ_T0056860.1 MGP_BALBcJ_G0026314.1 mouse_genomes_project 2 117330139 117339697 + MGP_BALBcJ_P0056860 Vps18 protein_coding protein_coding MGP_BALBcJ_T0056861.1 MGP_BALBcJ_G0026314.1 mouse_genomes_project 2 117330184 117339570 + Vps18 protein_coding processed_transcript MGP_BALBcJ_T0099659.1 MGP_BALBcJ_G0037695.1 mouse_genomes_project 2 15228963 15229068 + Gm25147 snRNA snRNA MGP_BALBcJ_T0013768.1 MGP_BALBcJ_G0011865.1 mouse_genomes_project 2 142782832 142783140 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013489.1 MGP_BALBcJ_G0011586.1 mouse_genomes_project 2 36968474 36968594 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003936.1 MGP_BALBcJ_G0003515.1 mouse_genomes_project 2 30151367 30153614 - Gm13523 antisense antisense MGP_BALBcJ_T0059025.1 MGP_BALBcJ_G0026801.1 mouse_genomes_project 2 162470800 162486106 + MGP_BALBcJ_P0059025 protein_coding protein_coding MGP_BALBcJ_T0059026.1 MGP_BALBcJ_G0026801.1 mouse_genomes_project 2 162470837 162486107 + MGP_BALBcJ_P0059026 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059027.1 MGP_BALBcJ_G0026801.1 mouse_genomes_project 2 162478613 162482520 + protein_coding retained_intron MGP_BALBcJ_T0059350.1 MGP_BALBcJ_G0026884.1 mouse_genomes_project 2 166015838 166019016 + protein_coding antisense MGP_BALBcJ_T0059351.1 MGP_BALBcJ_G0026884.1 mouse_genomes_project 2 166015838 166019015 + MGP_BALBcJ_P0059351 protein_coding protein_coding MGP_BALBcJ_T0059352.1 MGP_BALBcJ_G0026884.1 mouse_genomes_project 2 166015839 166018728 + protein_coding retained_intron MGP_BALBcJ_T0059353.1 MGP_BALBcJ_G0026884.1 mouse_genomes_project 2 166016125 166018536 + protein_coding retained_intron MGP_BALBcJ_T0059354.1 MGP_BALBcJ_G0026884.1 mouse_genomes_project 2 166016127 166018876 + protein_coding retained_intron MGP_BALBcJ_T0059355.1 MGP_BALBcJ_G0026884.1 mouse_genomes_project 2 166016553 166019016 + protein_coding retained_intron MGP_BALBcJ_T0010377.1 MGP_BALBcJ_G0008502.1 mouse_genomes_project 2 27201250 27201321 + Mir6997 miRNA miRNA MGP_BALBcJ_T0001017.1 MGP_BALBcJ_G0000945.1 mouse_genomes_project 2 7068384 7070066 + TEC TEC MGP_BALBcJ_T0004074.1 MGP_BALBcJ_G0003611.1 mouse_genomes_project 2 130089763 130160467 - Gm14280 antisense antisense MGP_BALBcJ_T0013596.1 MGP_BALBcJ_G0011693.1 mouse_genomes_project 2 77722485 77723308 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055091.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67098801 67119429 + MGP_BALBcJ_P0055091 Bbs5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055092.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67098838 67120005 + MGP_BALBcJ_P0055092 Bbs5 protein_coding protein_coding MGP_BALBcJ_T0055093.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67098846 67120005 + MGP_BALBcJ_P0055093 Bbs5 protein_coding protein_coding MGP_BALBcJ_T0055094.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67098860 67101191 + Bbs5 protein_coding retained_intron MGP_BALBcJ_T0055095.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67098883 67106604 + Bbs5 protein_coding retained_intron MGP_BALBcJ_T0055096.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67098893 67105446 + Bbs5 protein_coding retained_intron MGP_BALBcJ_T0055097.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67107779 67117139 + Bbs5 protein_coding retained_intron MGP_BALBcJ_T0055098.1 MGP_BALBcJ_G0025772.1 mouse_genomes_project 2 67109341 67120005 + MGP_BALBcJ_P0055098 Bbs5 protein_coding protein_coding MGP_BALBcJ_T0054764.1 MGP_BALBcJ_G0025711.1 mouse_genomes_project 2 51510518 51511978 - MGP_BALBcJ_P0054764 Rprm protein_coding protein_coding MGP_BALBcJ_T0013544.1 MGP_BALBcJ_G0011641.1 mouse_genomes_project 2 57511374 57512369 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053800.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27613235 27628556 - MGP_BALBcJ_P0053800 Crat protein_coding protein_coding MGP_BALBcJ_T0053801.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27613240 27619449 - Crat protein_coding processed_transcript MGP_BALBcJ_T0053802.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27613865 27628598 - MGP_BALBcJ_P0053802 Crat protein_coding protein_coding MGP_BALBcJ_T0053803.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27615262 27618057 - MGP_BALBcJ_P0053803 Crat protein_coding protein_coding MGP_BALBcJ_T0053804.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27615342 27628309 - MGP_BALBcJ_P0053804 Crat protein_coding protein_coding MGP_BALBcJ_T0053805.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27615401 27617730 - MGP_BALBcJ_P0053805 Crat protein_coding protein_coding MGP_BALBcJ_T0053806.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27620855 27628093 - MGP_BALBcJ_P0053806 Crat protein_coding protein_coding MGP_BALBcJ_T0053807.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27620900 27628333 - MGP_BALBcJ_P0053807 Crat protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053808.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27625820 27627124 - Crat protein_coding processed_transcript MGP_BALBcJ_T0053809.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27625916 27628303 - MGP_BALBcJ_P0053809 Crat protein_coding protein_coding MGP_BALBcJ_T0053810.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27625937 27628118 - MGP_BALBcJ_P0053810 Crat protein_coding protein_coding MGP_BALBcJ_T0053811.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27626844 27628385 - Crat protein_coding processed_transcript MGP_BALBcJ_T0053812.1 MGP_BALBcJ_G0025542.1 mouse_genomes_project 2 27627379 27628192 - MGP_BALBcJ_P0053812 Crat protein_coding protein_coding MGP_BALBcJ_T0057984.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142771320 142792514 - MGP_BALBcJ_P0057984 Snx5 protein_coding protein_coding MGP_BALBcJ_T0057985.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142771320 142792180 - MGP_BALBcJ_P0057985 Snx5 protein_coding protein_coding MGP_BALBcJ_T0057986.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142772261 142774903 - Snx5 protein_coding processed_transcript MGP_BALBcJ_T0057987.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142772313 142773875 - Snx5 protein_coding processed_transcript MGP_BALBcJ_T0057988.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142774922 142776601 - Snx5 protein_coding processed_transcript MGP_BALBcJ_T0057989.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142775888 142776580 - Snx5 protein_coding processed_transcript MGP_BALBcJ_T0057990.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142775991 142782361 - Snx5 protein_coding processed_transcript MGP_BALBcJ_T0057991.1 MGP_BALBcJ_G0026557.1 mouse_genomes_project 2 142791061 142792392 - Snx5 protein_coding processed_transcript MGP_BALBcJ_T0098361.1 MGP_BALBcJ_G0036415.1 mouse_genomes_project 2 89731777 89732178 - pseudogene pseudogene MGP_BALBcJ_T0099656.1 MGP_BALBcJ_G0037692.1 mouse_genomes_project 2 2235012 2235199 - Gm23118 snRNA snRNA MGP_BALBcJ_T0007373.1 MGP_BALBcJ_G0006043.1 mouse_genomes_project 2 166661811 166700922 + A530013C23Rik lincRNA lincRNA MGP_BALBcJ_T0007374.1 MGP_BALBcJ_G0006043.1 mouse_genomes_project 2 166661815 166668420 + A530013C23Rik lincRNA lincRNA MGP_BALBcJ_T0055877.1 MGP_BALBcJ_G0026072.1 mouse_genomes_project 2 87286068 87287936 - MGP_BALBcJ_P0055877 Olfr1242 protein_coding protein_coding MGP_BALBcJ_T0055878.1 MGP_BALBcJ_G0026072.1 mouse_genomes_project 2 87286979 87291710 - MGP_BALBcJ_P0055878 Olfr1242 protein_coding protein_coding MGP_BALBcJ_T0055879.1 MGP_BALBcJ_G0026072.1 mouse_genomes_project 2 87287609 87291200 - Olfr1242 protein_coding processed_transcript MGP_BALBcJ_T0055989.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88834178 88842965 - MGP_BALBcJ_P0055989 Slc39a13 protein_coding protein_coding MGP_BALBcJ_T0055990.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88834178 88842777 - MGP_BALBcJ_P0055990 Slc39a13 protein_coding protein_coding MGP_BALBcJ_T0055991.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88835260 88842831 - MGP_BALBcJ_P0055991 Slc39a13 protein_coding protein_coding MGP_BALBcJ_T0055992.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88835508 88837833 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0055993.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88835511 88836773 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0055994.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88835791 88842846 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0055995.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88837027 88838563 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0055996.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88837967 88842787 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0055997.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88838432 88842735 - MGP_BALBcJ_P0055997 Slc39a13 protein_coding protein_coding MGP_BALBcJ_T0055998.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88840978 88841419 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0055999.1 MGP_BALBcJ_G0026110.1 mouse_genomes_project 2 88841665 88842787 - Slc39a13 protein_coding processed_transcript MGP_BALBcJ_T0053629.1 MGP_BALBcJ_G0025519.1 mouse_genomes_project 2 27073985 27076177 + MGP_BALBcJ_P0053629 Cercam protein_coding protein_coding MGP_BALBcJ_T0053630.1 MGP_BALBcJ_G0025519.1 mouse_genomes_project 2 27074315 27088046 + MGP_BALBcJ_P0053630 Cercam protein_coding protein_coding MGP_BALBcJ_T0053631.1 MGP_BALBcJ_G0025519.1 mouse_genomes_project 2 27074365 27076131 + MGP_BALBcJ_P0053631 Cercam protein_coding protein_coding MGP_BALBcJ_T0053632.1 MGP_BALBcJ_G0025519.1 mouse_genomes_project 2 27080770 27083686 + Cercam protein_coding retained_intron MGP_BALBcJ_T0053633.1 MGP_BALBcJ_G0025519.1 mouse_genomes_project 2 27081315 27086132 + Cercam protein_coding retained_intron MGP_BALBcJ_T0053067.1 MGP_BALBcJ_G0025414.1 mouse_genomes_project 2 22454135 22459929 - MGP_BALBcJ_P0053067 Uap1l1 protein_coding protein_coding MGP_BALBcJ_T0053068.1 MGP_BALBcJ_G0025414.1 mouse_genomes_project 2 22455735 22456977 - Uap1l1 protein_coding processed_transcript MGP_BALBcJ_T0053069.1 MGP_BALBcJ_G0025414.1 mouse_genomes_project 2 22455736 22457945 - Uap1l1 protein_coding processed_transcript MGP_BALBcJ_T0053070.1 MGP_BALBcJ_G0025414.1 mouse_genomes_project 2 22455740 22458375 - Uap1l1 protein_coding processed_transcript MGP_BALBcJ_T0053071.1 MGP_BALBcJ_G0025414.1 mouse_genomes_project 2 22457589 22458904 - Uap1l1 protein_coding processed_transcript MGP_BALBcJ_T0053072.1 MGP_BALBcJ_G0025414.1 mouse_genomes_project 2 22458364 22459862 - Uap1l1 protein_coding processed_transcript MGP_BALBcJ_T0013465.1 MGP_BALBcJ_G0011562.1 mouse_genomes_project 2 31704787 31705147 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010343.1 MGP_BALBcJ_G0008468.1 mouse_genomes_project 2 7516405 7516501 + Mir466d miRNA miRNA MGP_BALBcJ_T0054967.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62350488 62353071 - Grb14 protein_coding processed_transcript MGP_BALBcJ_T0054968.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62350488 62355367 - MGP_BALBcJ_P0054968 Grb14 protein_coding protein_coding MGP_BALBcJ_T0054969.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62350488 62463115 - MGP_BALBcJ_P0054969 Grb14 protein_coding protein_coding MGP_BALBcJ_T0054970.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62350488 62355292 - MGP_BALBcJ_P0054970 Grb14 protein_coding protein_coding MGP_BALBcJ_T0054971.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62366960 62372664 - Grb14 protein_coding processed_transcript MGP_BALBcJ_T0054972.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62368426 62415700 - MGP_BALBcJ_P0054972 Grb14 protein_coding protein_coding MGP_BALBcJ_T0054973.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62374512 62415677 - Grb14 protein_coding processed_transcript MGP_BALBcJ_T0054974.1 MGP_BALBcJ_G0025747.1 mouse_genomes_project 2 62463000 62467633 - Grb14 protein_coding processed_transcript MGP_BALBcJ_T0098575.1 MGP_BALBcJ_G0036629.1 mouse_genomes_project 2 110476369 110476483 - n-R5s202 rRNA rRNA MGP_BALBcJ_T0057440.1 MGP_BALBcJ_G0026428.1 mouse_genomes_project 2 125461406 125475512 + Snrnp200 protein_coding retained_intron MGP_BALBcJ_T0057441.1 MGP_BALBcJ_G0026428.1 mouse_genomes_project 2 125461419 125493506 + MGP_BALBcJ_P0057441 Snrnp200 protein_coding protein_coding MGP_BALBcJ_T0057442.1 MGP_BALBcJ_G0026428.1 mouse_genomes_project 2 125474488 125477954 + Snrnp200 protein_coding processed_transcript MGP_BALBcJ_T0057443.1 MGP_BALBcJ_G0026428.1 mouse_genomes_project 2 125489723 125491373 + Snrnp200 protein_coding retained_intron MGP_BALBcJ_T0057444.1 MGP_BALBcJ_G0026428.1 mouse_genomes_project 2 125491138 125493015 + Snrnp200 protein_coding retained_intron MGP_BALBcJ_T0052785.1 MGP_BALBcJ_G0025362.1 mouse_genomes_project 2 18471627 18937119 + MGP_BALBcJ_P0052785 Gpr158 protein_coding protein_coding MGP_BALBcJ_T0052786.1 MGP_BALBcJ_G0025362.1 mouse_genomes_project 2 18471652 18917914 + Gpr158 protein_coding retained_intron MGP_BALBcJ_T0058622.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154774396 154784508 + MGP_BALBcJ_P0058622 Ergic3 protein_coding protein_coding MGP_BALBcJ_T0058623.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154774457 154784508 + MGP_BALBcJ_P0058623 Ergic3 protein_coding protein_coding MGP_BALBcJ_T0058624.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154774574 154777574 + Ergic3 protein_coding retained_intron MGP_BALBcJ_T0058625.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154774970 154783867 + MGP_BALBcJ_P0058625 Ergic3 protein_coding protein_coding MGP_BALBcJ_T0058626.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154776789 154784316 + MGP_BALBcJ_P0058626 Ergic3 protein_coding protein_coding MGP_BALBcJ_T0058627.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154782737 154784379 + Ergic3 protein_coding processed_transcript MGP_BALBcJ_T0058628.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154783443 154784325 + Ergic3 protein_coding processed_transcript MGP_BALBcJ_T0058629.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154783722 154784508 + Ergic3 protein_coding retained_intron MGP_BALBcJ_T0058630.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154783774 154784508 + Ergic3 protein_coding retained_intron MGP_BALBcJ_T0058631.1 MGP_BALBcJ_G0026727.1 mouse_genomes_project 2 154783876 154784506 + Ergic3 protein_coding retained_intron MGP_BALBcJ_T0055486.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76910661 76918775 - MGP_BALBcJ_P0055486 Cerkl protein_coding protein_coding MGP_BALBcJ_T0055487.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76911870 77012634 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055488.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76912620 76913839 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055489.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76912648 77012571 - MGP_BALBcJ_P0055489 Cerkl protein_coding protein_coding MGP_BALBcJ_T0055490.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76912711 77012587 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055491.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76912711 77012571 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055492.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76912713 77012677 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055493.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76918740 77037642 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055494.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76923350 76952421 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055495.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76935895 76952446 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055496.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76969020 76972640 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0055497.1 MGP_BALBcJ_G0025850.1 mouse_genomes_project 2 76970348 76975214 - Cerkl protein_coding processed_transcript MGP_BALBcJ_T0056578.1 MGP_BALBcJ_G0026213.1 mouse_genomes_project 2 107951582 107978798 + MGP_BALBcJ_P0056578 Ccdc34 protein_coding protein_coding MGP_BALBcJ_T0056579.1 MGP_BALBcJ_G0026213.1 mouse_genomes_project 2 107951727 108101722 + MGP_BALBcJ_P0056579 Ccdc34 protein_coding protein_coding MGP_BALBcJ_T0056580.1 MGP_BALBcJ_G0026213.1 mouse_genomes_project 2 107951745 107978804 + MGP_BALBcJ_P0056580 Ccdc34 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056581.1 MGP_BALBcJ_G0026213.1 mouse_genomes_project 2 107955743 107974745 + Ccdc34 protein_coding retained_intron MGP_BALBcJ_T0056582.1 MGP_BALBcJ_G0026213.1 mouse_genomes_project 2 107971505 107978331 + Ccdc34 protein_coding retained_intron MGP_BALBcJ_T0056583.1 MGP_BALBcJ_G0026213.1 mouse_genomes_project 2 107974376 107978146 + Ccdc34 protein_coding retained_intron MGP_BALBcJ_T0056742.1 MGP_BALBcJ_G0026285.1 mouse_genomes_project 2 116133753 116148962 + MGP_BALBcJ_P0056742 Thbs1 protein_coding protein_coding MGP_BALBcJ_T0056743.1 MGP_BALBcJ_G0026285.1 mouse_genomes_project 2 116144771 116145596 + Thbs1 protein_coding processed_transcript MGP_BALBcJ_T0001020.1 MGP_BALBcJ_G0000948.1 mouse_genomes_project 2 8201098 8203770 - TEC TEC MGP_BALBcJ_T0053340.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23709815 23719278 + MGP_BALBcJ_P0053340 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053341.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23710857 23722578 + MGP_BALBcJ_P0053341 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053342.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23713687 23722575 + MGP_BALBcJ_P0053342 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053343.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23713703 23722576 + MGP_BALBcJ_P0053343 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053344.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23713728 23723014 + MGP_BALBcJ_P0053344 Egfl7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053345.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23716468 23722575 + MGP_BALBcJ_P0053345 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053347.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23716499 23720802 + Egfl7 protein_coding processed_transcript MGP_BALBcJ_T0053348.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23716510 23720833 + MGP_BALBcJ_P0053348 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053349.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23716527 23720383 + MGP_BALBcJ_P0053349 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053350.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23718436 23722337 + MGP_BALBcJ_P0053350 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053351.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23719228 23721457 + Egfl7 protein_coding retained_intron MGP_BALBcJ_T0053352.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23720413 23720866 + Egfl7 protein_coding retained_intron MGP_BALBcJ_T0053353.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23720858 23722570 + MGP_BALBcJ_P0053353 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053354.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23720922 23722576 + MGP_BALBcJ_P0053354 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053355.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23721327 23722576 + MGP_BALBcJ_P0053355 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053356.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23721328 23722576 + MGP_BALBcJ_P0053356 Egfl7 protein_coding protein_coding MGP_BALBcJ_T0053357.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23721339 23722184 + Egfl7 protein_coding retained_intron MGP_BALBcJ_T0053358.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23721916 23722575 + Egfl7 protein_coding processed_transcript MGP_BALBcJ_T0053359.1 MGP_BALBcJ_G0025464.1 mouse_genomes_project 2 23722040 23722576 + Egfl7 protein_coding retained_intron MGP_BALBcJ_T0055917.1 MGP_BALBcJ_G0026098.1 mouse_genomes_project 2 88075473 88082511 + MGP_BALBcJ_P0055917 protein_coding protein_coding MGP_BALBcJ_T0013454.1 MGP_BALBcJ_G0011551.1 mouse_genomes_project 2 25985363 25985487 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001048.1 MGP_BALBcJ_G0000976.1 mouse_genomes_project 2 12140893 12143653 + TEC TEC MGP_BALBcJ_T0058609.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154738997 154774259 - MGP_BALBcJ_P0058609 6430550D23Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058614.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154766785 154774271 - MGP_BALBcJ_P0058614 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0058615.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154766785 154770800 - MGP_BALBcJ_P0058615 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0058616.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154766952 154774275 - 6430550D23Rik protein_coding retained_intron MGP_BALBcJ_T0058617.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154769515 154774271 - MGP_BALBcJ_P0058617 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0058618.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154769608 154774329 - MGP_BALBcJ_P0058618 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0058619.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154769695 154770800 - MGP_BALBcJ_P0058619 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0058620.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154769738 154770509 - MGP_BALBcJ_P0058620 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0058621.1 MGP_BALBcJ_G0026726.1 mouse_genomes_project 2 154769770 154770509 - MGP_BALBcJ_P0058621 6430550D23Rik protein_coding protein_coding MGP_BALBcJ_T0055621.1 MGP_BALBcJ_G0025879.1 mouse_genomes_project 2 82252964 82257555 + MGP_BALBcJ_P0055621 Ypel4 protein_coding protein_coding MGP_BALBcJ_T0055622.1 MGP_BALBcJ_G0025879.1 mouse_genomes_project 2 82253004 82257555 + MGP_BALBcJ_P0055622 Ypel4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055623.1 MGP_BALBcJ_G0025879.1 mouse_genomes_project 2 82253029 82254525 + Ypel4 protein_coding processed_transcript MGP_BALBcJ_T0055624.1 MGP_BALBcJ_G0025879.1 mouse_genomes_project 2 82253133 82257549 + Ypel4 protein_coding retained_intron MGP_BALBcJ_T0056754.1 MGP_BALBcJ_G0026289.1 mouse_genomes_project 2 116500901 116504032 - MGP_BALBcJ_P0056754 Srp14 protein_coding protein_coding MGP_BALBcJ_T0056755.1 MGP_BALBcJ_G0026289.1 mouse_genomes_project 2 116500902 116503159 - Srp14 protein_coding processed_transcript MGP_BALBcJ_T0056756.1 MGP_BALBcJ_G0026289.1 mouse_genomes_project 2 116500912 116503969 - Srp14 protein_coding processed_transcript MGP_BALBcJ_T0056757.1 MGP_BALBcJ_G0026289.1 mouse_genomes_project 2 116502840 116503956 - MGP_BALBcJ_P0056757 Srp14 protein_coding protein_coding MGP_BALBcJ_T0004068.1 MGP_BALBcJ_G0003607.1 mouse_genomes_project 2 127636190 127642261 + Il1bos antisense antisense MGP_BALBcJ_T0004069.1 MGP_BALBcJ_G0003607.1 mouse_genomes_project 2 127636195 127642246 + Il1bos antisense antisense MGP_BALBcJ_T0004070.1 MGP_BALBcJ_G0003607.1 mouse_genomes_project 2 127639641 127641590 + Il1bos antisense antisense MGP_BALBcJ_T0004050.1 MGP_BALBcJ_G0003592.1 mouse_genomes_project 2 116781198 116784253 + Inafm2 antisense antisense MGP_BALBcJ_T0058247.1 MGP_BALBcJ_G0026629.1 mouse_genomes_project 2 150885582 150905261 + MGP_BALBcJ_P0058247 Tbc1d20 protein_coding protein_coding MGP_BALBcJ_T0058248.1 MGP_BALBcJ_G0026629.1 mouse_genomes_project 2 150885605 150899624 + MGP_BALBcJ_P0058248 Tbc1d20 protein_coding protein_coding MGP_BALBcJ_T0058249.1 MGP_BALBcJ_G0026629.1 mouse_genomes_project 2 150885626 150905261 + Tbc1d20 protein_coding retained_intron MGP_BALBcJ_T0058250.1 MGP_BALBcJ_G0026629.1 mouse_genomes_project 2 150885934 150899970 + MGP_BALBcJ_P0058250 Tbc1d20 protein_coding protein_coding MGP_BALBcJ_T0058251.1 MGP_BALBcJ_G0026629.1 mouse_genomes_project 2 150899740 150902083 + Tbc1d20 protein_coding retained_intron MGP_BALBcJ_T0013522.1 MGP_BALBcJ_G0011619.1 mouse_genomes_project 2 51001598 51002044 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057203.1 MGP_BALBcJ_G0026370.1 mouse_genomes_project 2 119508718 119521013 - MGP_BALBcJ_P0057203 protein_coding protein_coding MGP_BALBcJ_T0055876.1 MGP_BALBcJ_G0026071.1 mouse_genomes_project 2 87274061 87275006 - MGP_BALBcJ_P0055876 Olfr1241 protein_coding protein_coding MGP_BALBcJ_T0004121.1 MGP_BALBcJ_G0003647.1 mouse_genomes_project 2 154586134 154587298 + Gm16098 antisense antisense MGP_BALBcJ_T0101673.1 MGP_BALBcJ_G0039665.1 mouse_genomes_project 2 130289824 130290064 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0054765.1 MGP_BALBcJ_G0025712.1 mouse_genomes_project 2 51867978 52566170 + MGP_BALBcJ_P0054765 Galnt13 protein_coding protein_coding MGP_BALBcJ_T0054766.1 MGP_BALBcJ_G0025712.1 mouse_genomes_project 2 51868048 52566170 + MGP_BALBcJ_P0054766 Galnt13 protein_coding protein_coding MGP_BALBcJ_T0054767.1 MGP_BALBcJ_G0025712.1 mouse_genomes_project 2 51868048 52566170 + MGP_BALBcJ_P0054767 Galnt13 protein_coding protein_coding MGP_BALBcJ_T0054768.1 MGP_BALBcJ_G0025712.1 mouse_genomes_project 2 51868152 52169696 + MGP_BALBcJ_P0054768 Galnt13 protein_coding protein_coding MGP_BALBcJ_T0054769.1 MGP_BALBcJ_G0025712.1 mouse_genomes_project 2 51956926 52560836 + MGP_BALBcJ_P0054769 Galnt13 protein_coding protein_coding MGP_BALBcJ_T0013558.1 MGP_BALBcJ_G0011655.1 mouse_genomes_project 2 63991069 63992468 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057227.1 MGP_BALBcJ_G0026374.1 mouse_genomes_project 2 120046804 120048227 - MGP_BALBcJ_P0057227 protein_coding protein_coding MGP_BALBcJ_T0054553.1 MGP_BALBcJ_G0025681.1 mouse_genomes_project 2 36314655 36326049 + Arpc5l protein_coding processed_transcript MGP_BALBcJ_T0054554.1 MGP_BALBcJ_G0025681.1 mouse_genomes_project 2 36317391 36326600 + MGP_BALBcJ_P0054554 Arpc5l protein_coding protein_coding MGP_BALBcJ_T0054555.1 MGP_BALBcJ_G0025681.1 mouse_genomes_project 2 36317456 36324622 + Arpc5l protein_coding processed_transcript MGP_BALBcJ_T0054556.1 MGP_BALBcJ_G0025681.1 mouse_genomes_project 2 36317472 36326116 + MGP_BALBcJ_P0054556 Arpc5l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054557.1 MGP_BALBcJ_G0025681.1 mouse_genomes_project 2 36319333 36326600 + Arpc5l protein_coding processed_transcript MGP_BALBcJ_T0059781.1 MGP_BALBcJ_G0026988.1 mouse_genomes_project 2 180510011 180519085 - MGP_BALBcJ_P0059781 Ptk6 protein_coding protein_coding MGP_BALBcJ_T0056934.1 MGP_BALBcJ_G0026331.1 mouse_genomes_project 2 118085301 118100585 + MGP_BALBcJ_P0056934 Gm28042 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056936.1 MGP_BALBcJ_G0026331.1 mouse_genomes_project 2 118085312 118100585 + MGP_BALBcJ_P0056936 Gm28042 protein_coding protein_coding MGP_BALBcJ_T0056937.1 MGP_BALBcJ_G0026331.1 mouse_genomes_project 2 118085315 118099151 + MGP_BALBcJ_P0056937 Gm28042 protein_coding protein_coding MGP_BALBcJ_T0056941.1 MGP_BALBcJ_G0026331.1 mouse_genomes_project 2 118089421 118092563 + MGP_BALBcJ_P0056941 Gm28042 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058306.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151456667 151504166 + MGP_BALBcJ_P0058306 Tpx2 protein_coding protein_coding MGP_BALBcJ_T0058307.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151456667 151504166 + MGP_BALBcJ_P0058307 Tpx2 protein_coding protein_coding MGP_BALBcJ_T0058308.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151456681 151503499 + MGP_BALBcJ_P0058308 Tpx2 protein_coding protein_coding MGP_BALBcJ_T0058309.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151456698 151503499 + MGP_BALBcJ_P0058309 Tpx2 protein_coding protein_coding MGP_BALBcJ_T0058310.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151456785 151463671 + Tpx2 protein_coding processed_transcript MGP_BALBcJ_T0058311.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151478141 151490077 + Tpx2 protein_coding retained_intron MGP_BALBcJ_T0058312.1 MGP_BALBcJ_G0026654.1 mouse_genomes_project 2 151491279 151493344 + Tpx2 protein_coding retained_intron MGP_BALBcJ_T0056083.1 MGP_BALBcJ_G0026120.1 mouse_genomes_project 2 89257586 89279707 + Lrp4 protein_coding processed_transcript MGP_BALBcJ_T0056084.1 MGP_BALBcJ_G0026120.1 mouse_genomes_project 2 89257586 89314670 + MGP_BALBcJ_P0056084 Lrp4 protein_coding protein_coding MGP_BALBcJ_T0056085.1 MGP_BALBcJ_G0026120.1 mouse_genomes_project 2 89276675 89281286 + Lrp4 protein_coding processed_transcript MGP_BALBcJ_T0056086.1 MGP_BALBcJ_G0026120.1 mouse_genomes_project 2 89276738 89279262 + Lrp4 protein_coding processed_transcript MGP_BALBcJ_T0058401.1 MGP_BALBcJ_G0026677.1 mouse_genomes_project 2 152558815 152571219 + MGP_BALBcJ_P0058401 Bpifb6 protein_coding protein_coding MGP_BALBcJ_T0058402.1 MGP_BALBcJ_G0026677.1 mouse_genomes_project 2 152558822 152565351 + MGP_BALBcJ_P0058402 Bpifb6 protein_coding protein_coding MGP_BALBcJ_T0013424.1 MGP_BALBcJ_G0011521.1 mouse_genomes_project 2 15640053 15640126 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004019.1 MGP_BALBcJ_G0003574.1 mouse_genomes_project 2 88238157 88244032 + 4933423P22Rik antisense antisense MGP_BALBcJ_T0004020.1 MGP_BALBcJ_G0003574.1 mouse_genomes_project 2 88238171 88247532 + 4933423P22Rik antisense antisense MGP_BALBcJ_T0059435.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167632361 167742235 - MGP_BALBcJ_P0059435 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059436.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167632361 167734376 - MGP_BALBcJ_P0059436 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059437.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167632361 167745774 - MGP_BALBcJ_P0059437 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059438.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167632361 167745597 - MGP_BALBcJ_P0059438 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059439.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167632386 167745599 - MGP_BALBcJ_P0059439 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059440.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167661081 167670145 - Atp9a protein_coding processed_transcript MGP_BALBcJ_T0059441.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167666844 167742235 - Atp9a protein_coding retained_intron MGP_BALBcJ_T0059442.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167691179 167746016 - MGP_BALBcJ_P0059442 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059443.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167691187 167746050 - MGP_BALBcJ_P0059443 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059444.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167705600 167713530 - MGP_BALBcJ_P0059444 Atp9a protein_coding protein_coding MGP_BALBcJ_T0059445.1 MGP_BALBcJ_G0026904.1 mouse_genomes_project 2 167705667 167713579 - MGP_BALBcJ_P0059445 Atp9a protein_coding protein_coding MGP_BALBcJ_T0013626.1 MGP_BALBcJ_G0011723.1 mouse_genomes_project 2 85098834 85099992 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058134.1 MGP_BALBcJ_G0026599.1 mouse_genomes_project 2 148398945 148399635 - MGP_BALBcJ_P0058134 C530025M09Rik protein_coding protein_coding MGP_BALBcJ_T0059071.1 MGP_BALBcJ_G0026818.1 mouse_genomes_project 2 163139413 163142377 - MGP_BALBcJ_P0059071 Svs4 protein_coding protein_coding MGP_BALBcJ_T0007399.1 MGP_BALBcJ_G0006065.1 mouse_genomes_project 2 170299939 170304922 + 1700007M16Rik lincRNA lincRNA MGP_BALBcJ_T0007310.1 MGP_BALBcJ_G0005989.1 mouse_genomes_project 2 131424165 131425529 + Gm14102 lincRNA lincRNA MGP_BALBcJ_T0053191.1 MGP_BALBcJ_G0025435.1 mouse_genomes_project 2 22763275 22766373 + MGP_BALBcJ_P0053191 Lcn8 protein_coding protein_coding MGP_BALBcJ_T0055830.1 MGP_BALBcJ_G0026031.1 mouse_genomes_project 2 86453235 86454377 + MGP_BALBcJ_P0055830 Olfr1193 protein_coding protein_coding MGP_BALBcJ_T0057252.1 MGP_BALBcJ_G0026385.1 mouse_genomes_project 2 120404662 120408697 + MGP_BALBcJ_P0057252 Duoxa2 protein_coding protein_coding MGP_BALBcJ_T0056389.1 MGP_BALBcJ_G0026174.1 mouse_genomes_project 2 101371686 101402093 - MGP_BALBcJ_P0056389 Cat protein_coding protein_coding MGP_BALBcJ_T0056390.1 MGP_BALBcJ_G0026174.1 mouse_genomes_project 2 101372431 101402058 - MGP_BALBcJ_P0056390 Cat protein_coding protein_coding MGP_BALBcJ_T0054386.1 MGP_BALBcJ_G0025627.1 mouse_genomes_project 2 32658544 32672834 - MGP_BALBcJ_P0054386 4930568D16Rik protein_coding protein_coding MGP_BALBcJ_T0059074.1 MGP_BALBcJ_G0026821.1 mouse_genomes_project 2 163199342 163201045 + MGP_BALBcJ_P0059074 Svs6 protein_coding protein_coding MGP_BALBcJ_T0011491.1 MGP_BALBcJ_G0009616.1 mouse_genomes_project 2 124496904 124497196 - Gm24739 misc_RNA misc_RNA MGP_BALBcJ_T0056456.1 MGP_BALBcJ_G0026187.1 mouse_genomes_project 2 102368613 102436915 - MGP_BALBcJ_P0056456 Hipk3 protein_coding protein_coding MGP_BALBcJ_T0056457.1 MGP_BALBcJ_G0026187.1 mouse_genomes_project 2 102371912 102436159 - MGP_BALBcJ_P0056457 Hipk3 protein_coding protein_coding MGP_BALBcJ_T0056458.1 MGP_BALBcJ_G0026187.1 mouse_genomes_project 2 102371986 102436423 - MGP_BALBcJ_P0056458 Hipk3 protein_coding protein_coding MGP_BALBcJ_T0056459.1 MGP_BALBcJ_G0026187.1 mouse_genomes_project 2 102375857 102381273 - Hipk3 protein_coding processed_transcript MGP_BALBcJ_T0058913.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157624298 157690024 + MGP_BALBcJ_P0058913 Dhx35 protein_coding protein_coding MGP_BALBcJ_T0058914.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157624298 157690024 + MGP_BALBcJ_P0058914 Dhx35 protein_coding protein_coding MGP_BALBcJ_T0058915.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157624353 157690024 + Dhx35 protein_coding processed_transcript MGP_BALBcJ_T0058916.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157624356 157676243 + Dhx35 protein_coding retained_intron MGP_BALBcJ_T0058917.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157624376 157658907 + MGP_BALBcJ_P0058917 Dhx35 protein_coding protein_coding MGP_BALBcJ_T0058918.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157624382 157647727 + Dhx35 protein_coding processed_transcript MGP_BALBcJ_T0058919.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157625414 157631012 + Dhx35 protein_coding processed_transcript MGP_BALBcJ_T0058920.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157656738 157664269 + Dhx35 protein_coding processed_transcript MGP_BALBcJ_T0058921.1 MGP_BALBcJ_G0026776.1 mouse_genomes_project 2 157679917 157689178 + Dhx35 protein_coding processed_transcript MGP_BALBcJ_T0055695.1 MGP_BALBcJ_G0025910.1 mouse_genomes_project 2 83317373 83318312 + MGP_BALBcJ_P0055695 Olfr1015 protein_coding protein_coding MGP_BALBcJ_T0054810.1 MGP_BALBcJ_G0025723.1 mouse_genomes_project 2 56248951 56340577 - Ccdc148 protein_coding processed_transcript MGP_BALBcJ_T0054811.1 MGP_BALBcJ_G0025723.1 mouse_genomes_project 2 56249075 56522661 - MGP_BALBcJ_P0054811 Ccdc148 protein_coding protein_coding MGP_BALBcJ_T0054813.1 MGP_BALBcJ_G0025723.1 mouse_genomes_project 2 56520820 56522530 - Ccdc148 protein_coding processed_transcript MGP_BALBcJ_T0001078.1 MGP_BALBcJ_G0001006.1 mouse_genomes_project 2 66407204 66408698 + TEC TEC MGP_BALBcJ_T0057784.1 MGP_BALBcJ_G0026508.1 mouse_genomes_project 2 129984860 130001298 - MGP_BALBcJ_P0057784 Adra1d protein_coding protein_coding MGP_BALBcJ_T0053407.1 MGP_BALBcJ_G0025476.1 mouse_genomes_project 2 24079910 24089002 + MGP_BALBcJ_P0053407 Stkld1 protein_coding protein_coding MGP_BALBcJ_T0053408.1 MGP_BALBcJ_G0025476.1 mouse_genomes_project 2 24079932 24099294 + MGP_BALBcJ_P0053408 Stkld1 protein_coding protein_coding MGP_BALBcJ_T0053409.1 MGP_BALBcJ_G0025476.1 mouse_genomes_project 2 24081186 24099189 + MGP_BALBcJ_P0053409 Stkld1 protein_coding unknown_likely_coding MGP_BALBcJ_T0001064.1 MGP_BALBcJ_G0000992.1 mouse_genomes_project 2 35309725 35315244 + TEC TEC MGP_BALBcJ_T0059221.1 MGP_BALBcJ_G0026864.1 mouse_genomes_project 2 164021316 164146515 - MGP_BALBcJ_P0059221 Cdh22 protein_coding protein_coding MGP_BALBcJ_T0059222.1 MGP_BALBcJ_G0026864.1 mouse_genomes_project 2 164022136 164091060 - MGP_BALBcJ_P0059222 Cdh22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052284.1 MGP_BALBcJ_G0025281.1 mouse_genomes_project 2 398605 417822 - MGP_BALBcJ_P0052284 Suv39h2 protein_coding protein_coding MGP_BALBcJ_T0052285.1 MGP_BALBcJ_G0025281.1 mouse_genomes_project 2 400370 417751 - MGP_BALBcJ_P0052285 Suv39h2 protein_coding protein_coding MGP_BALBcJ_T0052286.1 MGP_BALBcJ_G0025281.1 mouse_genomes_project 2 400371 417210 - MGP_BALBcJ_P0052286 Suv39h2 protein_coding protein_coding MGP_BALBcJ_T0052287.1 MGP_BALBcJ_G0025281.1 mouse_genomes_project 2 400393 417760 - MGP_BALBcJ_P0052287 Suv39h2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056208.1 MGP_BALBcJ_G0026139.1 mouse_genomes_project 2 90271991 90279017 - MGP_BALBcJ_P0056208 Slc35c1 protein_coding protein_coding MGP_BALBcJ_T0056209.1 MGP_BALBcJ_G0026139.1 mouse_genomes_project 2 90271994 90279761 - MGP_BALBcJ_P0056209 Slc35c1 protein_coding protein_coding MGP_BALBcJ_T0056210.1 MGP_BALBcJ_G0026139.1 mouse_genomes_project 2 90277908 90278932 - MGP_BALBcJ_P0056210 Slc35c1 protein_coding protein_coding MGP_BALBcJ_T0054963.1 MGP_BALBcJ_G0025746.1 mouse_genomes_project 2 61405503 61542119 - MGP_BALBcJ_P0054963 Fign protein_coding protein_coding MGP_BALBcJ_T0054964.1 MGP_BALBcJ_G0025746.1 mouse_genomes_project 2 61411321 61542145 - MGP_BALBcJ_P0054964 Fign protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054965.1 MGP_BALBcJ_G0025746.1 mouse_genomes_project 2 61414429 61542095 - Fign protein_coding processed_transcript MGP_BALBcJ_T0054966.1 MGP_BALBcJ_G0025746.1 mouse_genomes_project 2 61414598 61542117 - Fign protein_coding processed_transcript MGP_BALBcJ_T0057974.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142469209 142474097 - Rrbp1 protein_coding processed_transcript MGP_BALBcJ_T0057975.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142469209 142532729 - MGP_BALBcJ_P0057975 Rrbp1 protein_coding protein_coding MGP_BALBcJ_T0057976.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142469942 142471551 - Rrbp1 protein_coding processed_transcript MGP_BALBcJ_T0057977.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142472306 142476998 - Rrbp1 protein_coding processed_transcript MGP_BALBcJ_T0057978.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142478198 142479461 - Rrbp1 protein_coding processed_transcript MGP_BALBcJ_T0057979.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142483051 142489939 - Rrbp1 protein_coding processed_transcript MGP_BALBcJ_T0057980.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142487184 142505581 - Rrbp1 protein_coding processed_transcript MGP_BALBcJ_T0057981.1 MGP_BALBcJ_G0026555.1 mouse_genomes_project 2 142508268 142532729 - MGP_BALBcJ_P0057981 Rrbp1 protein_coding protein_coding MGP_BALBcJ_T0003900.1 MGP_BALBcJ_G0003489.1 mouse_genomes_project 2 22381700 22389406 + Grin1os antisense antisense MGP_BALBcJ_T0055842.1 MGP_BALBcJ_G0026043.1 mouse_genomes_project 2 86714246 86715179 - MGP_BALBcJ_P0055842 Olfr1209 protein_coding protein_coding MGP_BALBcJ_T0056308.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99464575 99531555 - MGP_BALBcJ_P0056308 B230118H07Rik protein_coding protein_coding MGP_BALBcJ_T0056309.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99464584 99478333 - MGP_BALBcJ_P0056309 B230118H07Rik protein_coding protein_coding MGP_BALBcJ_T0056310.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99464685 99531509 - MGP_BALBcJ_P0056310 B230118H07Rik protein_coding protein_coding MGP_BALBcJ_T0056311.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99464689 99487133 - B230118H07Rik protein_coding processed_transcript MGP_BALBcJ_T0056312.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99478242 99530869 - MGP_BALBcJ_P0056312 B230118H07Rik protein_coding protein_coding MGP_BALBcJ_T0056313.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99511702 99531576 - B230118H07Rik protein_coding retained_intron MGP_BALBcJ_T0056314.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99512228 99523409 - B230118H07Rik protein_coding retained_intron MGP_BALBcJ_T0056315.1 MGP_BALBcJ_G0026158.1 mouse_genomes_project 2 99512738 99552092 - B230118H07Rik protein_coding retained_intron MGP_BALBcJ_T0007266.1 MGP_BALBcJ_G0005955.1 mouse_genomes_project 2 104537182 104543232 - Gm14014 lincRNA lincRNA MGP_BALBcJ_T0101012.1 MGP_BALBcJ_G0039048.1 mouse_genomes_project 2 167332266 167332403 + Gm22704 snoRNA snoRNA MGP_BALBcJ_T0055882.1 MGP_BALBcJ_G0026074.1 mouse_genomes_project 2 87362119 87363043 - MGP_BALBcJ_P0055882 Olfr1245 protein_coding protein_coding MGP_BALBcJ_T0059117.1 MGP_BALBcJ_G0026835.1 mouse_genomes_project 2 163482251 163487495 - MGP_BALBcJ_P0059117 Eppin protein_coding protein_coding MGP_BALBcJ_T0013434.1 MGP_BALBcJ_G0011531.1 mouse_genomes_project 2 18347386 18347722 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013824.1 MGP_BALBcJ_G0011921.1 mouse_genomes_project 2 155946678 155947038 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013490.1 MGP_BALBcJ_G0011587.1 mouse_genomes_project 2 37498702 37499136 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013513.1 MGP_BALBcJ_G0011610.1 mouse_genomes_project 2 48657656 48658480 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001053.1 MGP_BALBcJ_G0000981.1 mouse_genomes_project 2 21963842 21968321 - TEC TEC MGP_BALBcJ_T0100939.1 MGP_BALBcJ_G0038975.1 mouse_genomes_project 2 30241687 30241817 + Snora65 snoRNA snoRNA MGP_BALBcJ_T0054329.1 MGP_BALBcJ_G0025619.1 mouse_genomes_project 2 32197425 32217673 - MGP_BALBcJ_P0054329 Phf19 protein_coding protein_coding MGP_BALBcJ_T0054330.1 MGP_BALBcJ_G0025619.1 mouse_genomes_project 2 32197452 32207821 - Phf19 protein_coding processed_transcript MGP_BALBcJ_T0054331.1 MGP_BALBcJ_G0025619.1 mouse_genomes_project 2 32201750 32208576 - Phf19 protein_coding processed_transcript MGP_BALBcJ_T0054332.1 MGP_BALBcJ_G0025619.1 mouse_genomes_project 2 32202637 32217723 - Phf19 protein_coding retained_intron MGP_BALBcJ_T0054333.1 MGP_BALBcJ_G0025619.1 mouse_genomes_project 2 32210798 32217714 - MGP_BALBcJ_P0054333 Phf19 protein_coding protein_coding MGP_BALBcJ_T0010384.1 MGP_BALBcJ_G0008509.1 mouse_genomes_project 2 29587821 29587931 + Mir199b miRNA miRNA MGP_BALBcJ_T0055687.1 MGP_BALBcJ_G0025902.1 mouse_genomes_project 2 83119466 83120411 + MGP_BALBcJ_P0055687 Olfr998 protein_coding protein_coding MGP_BALBcJ_T0057596.1 MGP_BALBcJ_G0026471.1 mouse_genomes_project 2 128564874 128572734 - Snrpb protein_coding retained_intron MGP_BALBcJ_T0057597.1 MGP_BALBcJ_G0026471.1 mouse_genomes_project 2 128565095 128572834 - MGP_BALBcJ_P0057597 Snrpb protein_coding protein_coding MGP_BALBcJ_T0057598.1 MGP_BALBcJ_G0026471.1 mouse_genomes_project 2 128565248 128572834 - MGP_BALBcJ_P0057598 Snrpb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057599.1 MGP_BALBcJ_G0026471.1 mouse_genomes_project 2 128570284 128572765 - Snrpb protein_coding retained_intron MGP_BALBcJ_T0058071.1 MGP_BALBcJ_G0026574.1 mouse_genomes_project 2 144730628 144733710 + MGP_BALBcJ_P0058071 Insm1 protein_coding protein_coding MGP_BALBcJ_T0055710.1 MGP_BALBcJ_G0025924.1 mouse_genomes_project 2 83600911 83601994 + MGP_BALBcJ_P0055710 protein_coding protein_coding MGP_BALBcJ_T0017876.1 MGP_BALBcJ_G0015430.1 mouse_genomes_project 2 166142454 166145719 + 1110018N20Rik processed_transcript processed_transcript MGP_BALBcJ_T0017877.1 MGP_BALBcJ_G0015430.1 mouse_genomes_project 2 166142858 166145985 + 1110018N20Rik processed_transcript processed_transcript MGP_BALBcJ_T0017878.1 MGP_BALBcJ_G0015430.1 mouse_genomes_project 2 166143412 166146268 + 1110018N20Rik processed_transcript processed_transcript MGP_BALBcJ_T0055815.1 MGP_BALBcJ_G0026017.1 mouse_genomes_project 2 85888046 85889213 - MGP_BALBcJ_P0055815 Olfr1167 protein_coding protein_coding MGP_BALBcJ_T0013580.1 MGP_BALBcJ_G0011677.1 mouse_genomes_project 2 71382932 71383196 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013561.1 MGP_BALBcJ_G0011658.1 mouse_genomes_project 2 65232401 65232484 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054428.1 MGP_BALBcJ_G0025635.1 mouse_genomes_project 2 33429333 33450077 - MGP_BALBcJ_P0054428 Rbm18 protein_coding protein_coding MGP_BALBcJ_T0054429.1 MGP_BALBcJ_G0025635.1 mouse_genomes_project 2 33430854 33450065 - MGP_BALBcJ_P0054429 Rbm18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054430.1 MGP_BALBcJ_G0025635.1 mouse_genomes_project 2 33431029 33450104 - MGP_BALBcJ_P0054430 Rbm18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054431.1 MGP_BALBcJ_G0025635.1 mouse_genomes_project 2 33438928 33450100 - Rbm18 protein_coding retained_intron MGP_BALBcJ_T0007141.1 MGP_BALBcJ_G0005854.1 mouse_genomes_project 2 23266088 23267086 + 1810012K08Rik lincRNA lincRNA MGP_BALBcJ_T0055937.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88547612 88584618 + MGP_BALBcJ_P0055937 Agbl2 protein_coding protein_coding MGP_BALBcJ_T0055938.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88547612 88602252 + MGP_BALBcJ_P0055938 Agbl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055939.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88547613 88578042 + MGP_BALBcJ_P0055939 Agbl2 protein_coding protein_coding MGP_BALBcJ_T0055940.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88547629 88583605 + MGP_BALBcJ_P0055940 Agbl2 protein_coding protein_coding MGP_BALBcJ_T0055941.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88548153 88581642 + MGP_BALBcJ_P0055941 Agbl2 protein_coding protein_coding MGP_BALBcJ_T0055942.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88548180 88596633 + Agbl2 protein_coding processed_transcript MGP_BALBcJ_T0055943.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88548488 88583605 + MGP_BALBcJ_P0055943 Agbl2 protein_coding protein_coding MGP_BALBcJ_T0055944.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88548941 88582886 + MGP_BALBcJ_P0055944 Agbl2 protein_coding unknown_likely_coding MGP_BALBcJ_T0055945.1 MGP_BALBcJ_G0026102.1 mouse_genomes_project 2 88548975 88563485 + Agbl2 protein_coding processed_transcript MGP_BALBcJ_T0057169.1 MGP_BALBcJ_G0026363.1 mouse_genomes_project 2 119410594 119427836 - MGP_BALBcJ_P0057169 Strc protein_coding protein_coding MGP_BALBcJ_T0057170.1 MGP_BALBcJ_G0026363.1 mouse_genomes_project 2 119415297 119421915 - MGP_BALBcJ_P0057170 Strc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057171.1 MGP_BALBcJ_G0026363.1 mouse_genomes_project 2 119419774 119421899 - Strc protein_coding processed_transcript MGP_BALBcJ_T0057172.1 MGP_BALBcJ_G0026363.1 mouse_genomes_project 2 119419853 119421678 - Strc protein_coding retained_intron MGP_BALBcJ_T0057173.1 MGP_BALBcJ_G0026363.1 mouse_genomes_project 2 119423231 119433834 - Strc protein_coding retained_intron MGP_BALBcJ_T0054130.1 MGP_BALBcJ_G0025589.1 mouse_genomes_project 2 29894742 29908033 + MGP_BALBcJ_P0054130 Ak1 protein_coding protein_coding MGP_BALBcJ_T0054131.1 MGP_BALBcJ_G0025589.1 mouse_genomes_project 2 29898422 29908029 + MGP_BALBcJ_P0054131 Ak1 protein_coding protein_coding MGP_BALBcJ_T0054132.1 MGP_BALBcJ_G0025589.1 mouse_genomes_project 2 29898423 29904149 + MGP_BALBcJ_P0054132 Ak1 protein_coding protein_coding MGP_BALBcJ_T0054133.1 MGP_BALBcJ_G0025589.1 mouse_genomes_project 2 29901373 29904112 + MGP_BALBcJ_P0054133 Ak1 protein_coding protein_coding MGP_BALBcJ_T0054134.1 MGP_BALBcJ_G0025589.1 mouse_genomes_project 2 29902487 29908027 + MGP_BALBcJ_P0054134 Ak1 protein_coding protein_coding MGP_BALBcJ_T0054135.1 MGP_BALBcJ_G0025589.1 mouse_genomes_project 2 29902504 29906375 + Ak1 protein_coding retained_intron MGP_BALBcJ_T0004128.1 MGP_BALBcJ_G0003654.1 mouse_genomes_project 2 159589517 159597500 - Gm27206 antisense antisense MGP_BALBcJ_T0055913.1 MGP_BALBcJ_G0026094.1 mouse_genomes_project 2 87920309 87921236 - MGP_BALBcJ_P0055913 Olfr32 protein_coding protein_coding MGP_BALBcJ_T0100958.1 MGP_BALBcJ_G0038994.1 mouse_genomes_project 2 78297773 78297900 + Gm25420 snoRNA snoRNA MGP_BALBcJ_T0013577.1 MGP_BALBcJ_G0011674.1 mouse_genomes_project 2 70683404 70683896 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010337.1 MGP_BALBcJ_G0008462.1 mouse_genomes_project 2 7512854 7514416 + miRNA miRNA MGP_BALBcJ_T0010414.1 MGP_BALBcJ_G0008539.1 mouse_genomes_project 2 90009335 90009433 + Mir1955 miRNA miRNA MGP_BALBcJ_T0053691.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27286071 27289513 + MGP_BALBcJ_P0053691 Pkn3 protein_coding protein_coding MGP_BALBcJ_T0053692.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27286130 27299434 + Pkn3 protein_coding retained_intron MGP_BALBcJ_T0053693.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27286600 27288370 + MGP_BALBcJ_P0053693 Pkn3 protein_coding protein_coding MGP_BALBcJ_T0053694.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27286971 27299440 + MGP_BALBcJ_P0053694 Pkn3 protein_coding protein_coding MGP_BALBcJ_T0053695.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27287085 27293968 + Pkn3 protein_coding retained_intron MGP_BALBcJ_T0053696.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27287141 27299443 + Pkn3 protein_coding retained_intron MGP_BALBcJ_T0053697.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27289238 27291609 + Pkn3 protein_coding retained_intron MGP_BALBcJ_T0053698.1 MGP_BALBcJ_G0025525.1 mouse_genomes_project 2 27293073 27295457 + Pkn3 protein_coding retained_intron MGP_BALBcJ_T0052859.1 MGP_BALBcJ_G0025381.1 mouse_genomes_project 2 21391262 21405906 + MGP_BALBcJ_P0052859 Il1rn protein_coding protein_coding MGP_BALBcJ_T0052860.1 MGP_BALBcJ_G0025381.1 mouse_genomes_project 2 21391265 21393819 + Il1rn protein_coding retained_intron MGP_BALBcJ_T0052861.1 MGP_BALBcJ_G0025381.1 mouse_genomes_project 2 21391265 21403869 + MGP_BALBcJ_P0052861 Il1rn protein_coding protein_coding MGP_BALBcJ_T0052862.1 MGP_BALBcJ_G0025381.1 mouse_genomes_project 2 21399699 21404219 + MGP_BALBcJ_P0052862 Il1rn protein_coding protein_coding MGP_BALBcJ_T0052863.1 MGP_BALBcJ_G0025381.1 mouse_genomes_project 2 21399721 21405348 + MGP_BALBcJ_P0052863 Il1rn protein_coding protein_coding MGP_BALBcJ_T0052864.1 MGP_BALBcJ_G0025381.1 mouse_genomes_project 2 21399759 21400766 + Il1rn protein_coding processed_transcript MGP_BALBcJ_T0059161.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738345 163746774 + MGP_BALBcJ_P0059161 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059162.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738345 163745755 + MGP_BALBcJ_P0059162 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059163.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738359 163739232 + Ctsa protein_coding processed_transcript MGP_BALBcJ_T0059164.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738373 163746774 + MGP_BALBcJ_P0059164 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059165.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738381 163739535 + MGP_BALBcJ_P0059165 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059166.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738398 163739252 + Ctsa protein_coding processed_transcript MGP_BALBcJ_T0059167.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163738398 163741164 + MGP_BALBcJ_P0059167 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059168.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739279 163739894 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0059169.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739287 163742261 + MGP_BALBcJ_P0059169 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059170.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739319 163740347 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0059171.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739330 163741736 + MGP_BALBcJ_P0059171 Ctsa protein_coding protein_coding MGP_BALBcJ_T0059172.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739502 163740666 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0059173.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739502 163742294 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0059174.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739545 163741731 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0059175.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739782 163741194 + Ctsa protein_coding processed_transcript MGP_BALBcJ_T0059176.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163739945 163740942 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0059177.1 MGP_BALBcJ_G0026855.1 mouse_genomes_project 2 163742440 163743396 + Ctsa protein_coding retained_intron MGP_BALBcJ_T0058396.1 MGP_BALBcJ_G0026675.1 mouse_genomes_project 2 152515185 152530772 - MGP_BALBcJ_P0058396 Sun5 protein_coding protein_coding MGP_BALBcJ_T0058397.1 MGP_BALBcJ_G0026675.1 mouse_genomes_project 2 152520483 152530772 - Sun5 protein_coding processed_transcript MGP_BALBcJ_T0058398.1 MGP_BALBcJ_G0026675.1 mouse_genomes_project 2 152525086 152530772 - Sun5 protein_coding processed_transcript MGP_BALBcJ_T0007169.1 MGP_BALBcJ_G0005875.1 mouse_genomes_project 2 42699804 42747104 + Gm13479 lincRNA lincRNA MGP_BALBcJ_T0013688.1 MGP_BALBcJ_G0011785.1 mouse_genomes_project 2 108138943 108139928 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013657.1 MGP_BALBcJ_G0011754.1 mouse_genomes_project 2 97948892 97949076 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013415.1 MGP_BALBcJ_G0011512.1 mouse_genomes_project 2 12544232 12544662 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055794.1 MGP_BALBcJ_G0025998.1 mouse_genomes_project 2 85475244 85476180 - MGP_BALBcJ_P0055794 Olfr1141 protein_coding protein_coding MGP_BALBcJ_T0013576.1 MGP_BALBcJ_G0011673.1 mouse_genomes_project 2 70515198 70515495 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003932.1 MGP_BALBcJ_G0003511.1 mouse_genomes_project 2 29221718 29222576 - Gm13442 antisense antisense MGP_BALBcJ_T0004002.1 MGP_BALBcJ_G0003562.1 mouse_genomes_project 2 71232743 71234737 + Chn1os1 antisense antisense MGP_BALBcJ_T0053438.1 MGP_BALBcJ_G0025482.1 mouse_genomes_project 2 24223044 24252590 + MGP_BALBcJ_P0053438 Adamtsl2 protein_coding protein_coding MGP_BALBcJ_T0053439.1 MGP_BALBcJ_G0025482.1 mouse_genomes_project 2 24240904 24252584 + Adamtsl2 protein_coding retained_intron MGP_BALBcJ_T0053440.1 MGP_BALBcJ_G0025482.1 mouse_genomes_project 2 24241651 24242267 + Adamtsl2 protein_coding processed_transcript MGP_BALBcJ_T0053441.1 MGP_BALBcJ_G0025482.1 mouse_genomes_project 2 24247394 24251015 + Adamtsl2 protein_coding retained_intron MGP_BALBcJ_T0053442.1 MGP_BALBcJ_G0025482.1 mouse_genomes_project 2 24248271 24252590 + Adamtsl2 protein_coding retained_intron MGP_BALBcJ_T0057101.1 MGP_BALBcJ_G0026357.1 mouse_genomes_project 2 119207123 119217461 - MGP_BALBcJ_P0057101 Zscan29 protein_coding protein_coding MGP_BALBcJ_T0057102.1 MGP_BALBcJ_G0026357.1 mouse_genomes_project 2 119207123 119216460 - MGP_BALBcJ_P0057102 Zscan29 protein_coding protein_coding MGP_BALBcJ_T0057103.1 MGP_BALBcJ_G0026357.1 mouse_genomes_project 2 119207909 119210848 - Zscan29 protein_coding retained_intron MGP_BALBcJ_T0013493.1 MGP_BALBcJ_G0011590.1 mouse_genomes_project 2 38280950 38281911 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059717.1 MGP_BALBcJ_G0026979.1 mouse_genomes_project 2 180217548 180235071 - MGP_BALBcJ_P0059717 Ythdf1 protein_coding protein_coding MGP_BALBcJ_T0059718.1 MGP_BALBcJ_G0026979.1 mouse_genomes_project 2 180218543 180235071 - MGP_BALBcJ_P0059718 Ythdf1 protein_coding protein_coding MGP_BALBcJ_T0059719.1 MGP_BALBcJ_G0026979.1 mouse_genomes_project 2 180225925 180234509 - MGP_BALBcJ_P0059719 Ythdf1 protein_coding protein_coding MGP_BALBcJ_T0007318.1 MGP_BALBcJ_G0005997.1 mouse_genomes_project 2 136128083 136295662 + Gm14064 lincRNA lincRNA MGP_BALBcJ_T0007387.1 MGP_BALBcJ_G0006054.1 mouse_genomes_project 2 168133239 168137196 + Gm14258 lincRNA lincRNA MGP_BALBcJ_T0055551.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275837 81310883 + Itgav protein_coding retained_intron MGP_BALBcJ_T0055552.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275837 81361798 + MGP_BALBcJ_P0055552 Itgav protein_coding protein_coding MGP_BALBcJ_T0055553.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275892 81299253 + MGP_BALBcJ_P0055553 Itgav protein_coding protein_coding MGP_BALBcJ_T0055554.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275897 81292066 + Itgav protein_coding processed_transcript MGP_BALBcJ_T0055555.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275906 81299681 + Itgav protein_coding retained_intron MGP_BALBcJ_T0055556.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275967 81277228 + Itgav protein_coding processed_transcript MGP_BALBcJ_T0055557.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81275995 81361798 + MGP_BALBcJ_P0055557 Itgav protein_coding protein_coding MGP_BALBcJ_T0055558.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81356732 81358868 + MGP_BALBcJ_P0055558 Itgav protein_coding protein_coding MGP_BALBcJ_T0055559.1 MGP_BALBcJ_G0025865.1 mouse_genomes_project 2 81357803 81361798 + MGP_BALBcJ_P0055559 Itgav protein_coding protein_coding MGP_BALBcJ_T0056218.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91020599 91032454 + MGP_BALBcJ_P0056218 Trp53i11 protein_coding protein_coding MGP_BALBcJ_T0056219.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91020599 91035294 + MGP_BALBcJ_P0056219 Trp53i11 protein_coding protein_coding MGP_BALBcJ_T0056220.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91020612 91032984 + Trp53i11 protein_coding processed_transcript MGP_BALBcJ_T0056221.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91020612 91033843 + Trp53i11 protein_coding processed_transcript MGP_BALBcJ_T0056222.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91020635 91035284 + MGP_BALBcJ_P0056222 Trp53i11 protein_coding protein_coding MGP_BALBcJ_T0056223.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91020721 91022614 + Trp53i11 protein_coding processed_transcript MGP_BALBcJ_T0056224.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91022242 91035292 + Trp53i11 protein_coding processed_transcript MGP_BALBcJ_T0056225.1 MGP_BALBcJ_G0026143.1 mouse_genomes_project 2 91032453 91034133 + Trp53i11 protein_coding processed_transcript MGP_BALBcJ_T0059220.1 MGP_BALBcJ_G0026863.1 mouse_genomes_project 2 163987538 164000242 - MGP_BALBcJ_P0059220 1700025C18Rik protein_coding protein_coding MGP_BALBcJ_T0013856.1 MGP_BALBcJ_G0011953.1 mouse_genomes_project 2 173106920 173107130 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058293.1 MGP_BALBcJ_G0026651.1 mouse_genomes_project 2 151340508 151341667 + MGP_BALBcJ_P0058293 Id1 protein_coding protein_coding MGP_BALBcJ_T0058294.1 MGP_BALBcJ_G0026651.1 mouse_genomes_project 2 151340508 151341667 + MGP_BALBcJ_P0058294 Id1 protein_coding protein_coding MGP_BALBcJ_T0001025.1 MGP_BALBcJ_G0000953.1 mouse_genomes_project 2 8540494 8542597 - TEC TEC MGP_BALBcJ_T0100957.1 MGP_BALBcJ_G0038993.1 mouse_genomes_project 2 69533572 69533699 - Gm26408 snoRNA snoRNA MGP_BALBcJ_T0058297.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151385818 151436728 - MGP_BALBcJ_P0058297 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058298.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151385822 151435666 - MGP_BALBcJ_P0058298 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058299.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151386561 151433541 - Bcl2l1 protein_coding processed_transcript MGP_BALBcJ_T0058300.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151433132 151435641 - MGP_BALBcJ_P0058300 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058301.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151433367 151435316 - MGP_BALBcJ_P0058301 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058302.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151434432 151436112 - MGP_BALBcJ_P0058302 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058303.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151434534 151435652 - MGP_BALBcJ_P0058303 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058304.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151434706 151435618 - MGP_BALBcJ_P0058304 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0058305.1 MGP_BALBcJ_G0026653.1 mouse_genomes_project 2 151434762 151436710 - MGP_BALBcJ_P0058305 Bcl2l1 protein_coding protein_coding MGP_BALBcJ_T0010451.1 MGP_BALBcJ_G0008576.1 mouse_genomes_project 2 154107117 154107226 + Mir695 miRNA miRNA MGP_BALBcJ_T0052921.1 MGP_BALBcJ_G0025388.1 mouse_genomes_project 2 22042251 22052299 + MGP_BALBcJ_P0052921 Dph7 protein_coding protein_coding MGP_BALBcJ_T0052922.1 MGP_BALBcJ_G0025388.1 mouse_genomes_project 2 22042270 22052283 + MGP_BALBcJ_P0052922 Dph7 protein_coding unknown_likely_coding MGP_BALBcJ_T0052923.1 MGP_BALBcJ_G0025388.1 mouse_genomes_project 2 22042273 22052297 + MGP_BALBcJ_P0052923 Dph7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052924.1 MGP_BALBcJ_G0025388.1 mouse_genomes_project 2 22042303 22046426 + MGP_BALBcJ_P0052924 Dph7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052925.1 MGP_BALBcJ_G0025388.1 mouse_genomes_project 2 22042317 22052299 + Dph7 protein_coding retained_intron MGP_BALBcJ_T0052926.1 MGP_BALBcJ_G0025388.1 mouse_genomes_project 2 22042324 22049807 + MGP_BALBcJ_P0052926 Dph7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013476.1 MGP_BALBcJ_G0011573.1 mouse_genomes_project 2 34768782 34769552 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055678.1 MGP_BALBcJ_G0025894.1 mouse_genomes_project 2 82668822 82703299 - MGP_BALBcJ_P0055678 Lrrc55 protein_coding protein_coding MGP_BALBcJ_T0055679.1 MGP_BALBcJ_G0025894.1 mouse_genomes_project 2 82694670 82703299 - MGP_BALBcJ_P0055679 Lrrc55 protein_coding protein_coding MGP_BALBcJ_T0004017.1 MGP_BALBcJ_G0003572.1 mouse_genomes_project 2 82703531 82705604 + Gm13716 antisense antisense MGP_BALBcJ_T0057271.1 MGP_BALBcJ_G0026389.1 mouse_genomes_project 2 120558188 120706598 + MGP_BALBcJ_P0057271 Gm14085 protein_coding protein_coding MGP_BALBcJ_T0057272.1 MGP_BALBcJ_G0026389.1 mouse_genomes_project 2 120566611 120568891 + Gm14085 protein_coding retained_intron MGP_BALBcJ_T0003954.1 MGP_BALBcJ_G0003529.1 mouse_genomes_project 2 41398804 41404875 - Arhgap15os antisense antisense MGP_BALBcJ_T0013787.1 MGP_BALBcJ_G0011884.1 mouse_genomes_project 2 147905890 147907608 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055020.1 MGP_BALBcJ_G0025754.1 mouse_genomes_project 2 63634463 63710785 - MGP_BALBcJ_P0055020 Ttc21b protein_coding protein_coding MGP_BALBcJ_T0055021.1 MGP_BALBcJ_G0025754.1 mouse_genomes_project 2 63671980 63689399 - Ttc21b protein_coding retained_intron MGP_BALBcJ_T0055022.1 MGP_BALBcJ_G0025754.1 mouse_genomes_project 2 63685376 63703661 - Ttc21b protein_coding retained_intron MGP_BALBcJ_T0055727.1 MGP_BALBcJ_G0025941.1 mouse_genomes_project 2 83953008 83954865 - MGP_BALBcJ_P0055727 protein_coding protein_coding MGP_BALBcJ_T0058425.1 MGP_BALBcJ_G0026686.1 mouse_genomes_project 2 152895707 152914013 + MGP_BALBcJ_P0058425 Bpifb5 protein_coding protein_coding MGP_BALBcJ_T0053422.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24153956 24160880 + MGP_BALBcJ_P0053422 Cacfd1 protein_coding protein_coding MGP_BALBcJ_T0053423.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24153956 24161455 + MGP_BALBcJ_P0053423 Cacfd1 protein_coding protein_coding MGP_BALBcJ_T0053424.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24153956 24165222 + MGP_BALBcJ_P0053424 Cacfd1 protein_coding protein_coding MGP_BALBcJ_T0053425.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24153956 24165222 + MGP_BALBcJ_P0053425 Cacfd1 protein_coding protein_coding MGP_BALBcJ_T0053426.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24154043 24162452 + Cacfd1 protein_coding processed_transcript MGP_BALBcJ_T0053427.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24154112 24159934 + MGP_BALBcJ_P0053427 Cacfd1 protein_coding protein_coding MGP_BALBcJ_T0053428.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24154623 24164431 + MGP_BALBcJ_P0053428 Cacfd1 protein_coding protein_coding MGP_BALBcJ_T0053429.1 MGP_BALBcJ_G0025479.1 mouse_genomes_project 2 24159613 24161466 + Cacfd1 protein_coding retained_intron MGP_BALBcJ_T0017701.1 MGP_BALBcJ_G0015337.1 mouse_genomes_project 2 16543363 16544687 + 1810010K12Rik processed_transcript processed_transcript MGP_BALBcJ_T0017702.1 MGP_BALBcJ_G0015337.1 mouse_genomes_project 2 16544005 16546531 + 1810010K12Rik processed_transcript processed_transcript MGP_BALBcJ_T0056603.1 MGP_BALBcJ_G0026223.1 mouse_genomes_project 2 109155442 109156381 - MGP_BALBcJ_P0056603 Olfr1275 protein_coding protein_coding MGP_BALBcJ_T0057397.1 MGP_BALBcJ_G0026420.1 mouse_genomes_project 2 124951184 125026343 - MGP_BALBcJ_P0057397 Usp50 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057398.1 MGP_BALBcJ_G0026420.1 mouse_genomes_project 2 125003268 125012679 - Usp50 protein_coding processed_transcript MGP_BALBcJ_T0057399.1 MGP_BALBcJ_G0026420.1 mouse_genomes_project 2 125003639 125026349 - MGP_BALBcJ_P0057399 Usp50 protein_coding protein_coding MGP_BALBcJ_T0057400.1 MGP_BALBcJ_G0026420.1 mouse_genomes_project 2 125018298 125026342 - MGP_BALBcJ_P0057400 Usp50 protein_coding protein_coding MGP_BALBcJ_T0057401.1 MGP_BALBcJ_G0026420.1 mouse_genomes_project 2 125020231 125026363 - Usp50 protein_coding retained_intron MGP_BALBcJ_T0001094.1 MGP_BALBcJ_G0001021.1 mouse_genomes_project 2 147442854 147443219 - TEC TEC MGP_BALBcJ_T0053740.1 MGP_BALBcJ_G0025534.1 mouse_genomes_project 2 27448895 27490760 + MGP_BALBcJ_P0053740 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013581.1 MGP_BALBcJ_G0011678.1 mouse_genomes_project 2 71536452 71537453 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055686.1 MGP_BALBcJ_G0025901.1 mouse_genomes_project 2 82999006 83034682 - MGP_BALBcJ_P0055686 protein_coding protein_coding MGP_BALBcJ_T0059743.1 MGP_BALBcJ_G0026983.1 mouse_genomes_project 2 180301310 180331022 + MGP_BALBcJ_P0059743 Col20a1 protein_coding protein_coding MGP_BALBcJ_T0059744.1 MGP_BALBcJ_G0026983.1 mouse_genomes_project 2 180301310 180332234 + MGP_BALBcJ_P0059744 Col20a1 protein_coding protein_coding MGP_BALBcJ_T0059745.1 MGP_BALBcJ_G0026983.1 mouse_genomes_project 2 180303832 180331022 + MGP_BALBcJ_P0059745 Col20a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0059746.1 MGP_BALBcJ_G0026983.1 mouse_genomes_project 2 180315150 180318162 + MGP_BALBcJ_P0059746 Col20a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059747.1 MGP_BALBcJ_G0026983.1 mouse_genomes_project 2 180327947 180332234 + MGP_BALBcJ_P0059747 Col20a1 protein_coding protein_coding MGP_BALBcJ_T0055694.1 MGP_BALBcJ_G0025909.1 mouse_genomes_project 2 83307018 83308518 + MGP_BALBcJ_P0055694 Olfr1014 protein_coding protein_coding MGP_BALBcJ_T0017755.1 MGP_BALBcJ_G0015372.1 mouse_genomes_project 2 81289109 81314102 - Gm13684 processed_transcript processed_transcript MGP_BALBcJ_T0100947.1 MGP_BALBcJ_G0038983.1 mouse_genomes_project 2 46851889 46852010 - Gm25215 snoRNA snoRNA MGP_BALBcJ_T0054601.1 MGP_BALBcJ_G0025687.1 mouse_genomes_project 2 41083592 41725187 + MGP_BALBcJ_P0054601 Arhgap15 protein_coding protein_coding MGP_BALBcJ_T0054602.1 MGP_BALBcJ_G0025687.1 mouse_genomes_project 2 41083602 41716066 + MGP_BALBcJ_P0054602 Arhgap15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054603.1 MGP_BALBcJ_G0025687.1 mouse_genomes_project 2 41083637 41226667 + Arhgap15 protein_coding processed_transcript MGP_BALBcJ_T0054604.1 MGP_BALBcJ_G0025687.1 mouse_genomes_project 2 41083638 41716070 + MGP_BALBcJ_P0054604 Arhgap15 protein_coding protein_coding MGP_BALBcJ_T0054605.1 MGP_BALBcJ_G0025687.1 mouse_genomes_project 2 41125515 41714931 + MGP_BALBcJ_P0054605 Arhgap15 protein_coding unknown_likely_coding MGP_BALBcJ_T0054606.1 MGP_BALBcJ_G0025687.1 mouse_genomes_project 2 41404591 41482008 + Arhgap15 protein_coding processed_transcript MGP_BALBcJ_T0007227.1 MGP_BALBcJ_G0005924.1 mouse_genomes_project 2 75825120 75889932 + Gm14461 lincRNA lincRNA MGP_BALBcJ_T0007228.1 MGP_BALBcJ_G0005924.1 mouse_genomes_project 2 75889393 75889702 + Gm14461 lincRNA lincRNA MGP_BALBcJ_T0056153.1 MGP_BALBcJ_G0026131.1 mouse_genomes_project 2 89756968 89758915 + MGP_BALBcJ_P0056153 Gm9821 protein_coding protein_coding MGP_BALBcJ_T0004162.1 MGP_BALBcJ_G0003680.1 mouse_genomes_project 2 172218913 172222515 + Ctcflos antisense antisense MGP_BALBcJ_T0004163.1 MGP_BALBcJ_G0003680.1 mouse_genomes_project 2 172218930 172242365 + Ctcflos antisense antisense MGP_BALBcJ_T0004164.1 MGP_BALBcJ_G0003680.1 mouse_genomes_project 2 172228283 172239405 + Ctcflos antisense antisense MGP_BALBcJ_T0004165.1 MGP_BALBcJ_G0003680.1 mouse_genomes_project 2 172234356 172243299 + Ctcflos antisense antisense MGP_BALBcJ_T0055792.1 MGP_BALBcJ_G0025996.1 mouse_genomes_project 2 85459317 85460253 - MGP_BALBcJ_P0055792 Olfr1138 protein_coding protein_coding MGP_BALBcJ_T0054087.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29688871 29705504 - MGP_BALBcJ_P0054087 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054088.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29688871 29726005 - MGP_BALBcJ_P0054088 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054089.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29688874 29726028 - MGP_BALBcJ_P0054089 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054090.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29689354 29705137 - MGP_BALBcJ_P0054090 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054091.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29689444 29698390 - MGP_BALBcJ_P0054091 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054092.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29690593 29690956 - Slc25a25 protein_coding retained_intron MGP_BALBcJ_T0054093.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29691476 29694835 - Slc25a25 protein_coding retained_intron MGP_BALBcJ_T0054094.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29691556 29692215 - Slc25a25 protein_coding retained_intron MGP_BALBcJ_T0054095.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29691802 29705490 - MGP_BALBcJ_P0054095 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054096.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29693432 29696365 - MGP_BALBcJ_P0054096 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054097.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29693514 29705489 - MGP_BALBcJ_P0054097 Slc25a25 protein_coding protein_coding MGP_BALBcJ_T0054098.1 MGP_BALBcJ_G0025581.1 mouse_genomes_project 2 29701733 29705554 - Slc25a25 protein_coding retained_intron MGP_BALBcJ_T0010346.1 MGP_BALBcJ_G0008471.1 mouse_genomes_project 2 7517839 7517937 + Mir669m-2 miRNA miRNA MGP_BALBcJ_T0059929.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181097408 181162048 + MGP_BALBcJ_P0059929 Myt1 protein_coding protein_coding MGP_BALBcJ_T0059930.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181097472 181162412 + MGP_BALBcJ_P0059930 Myt1 protein_coding protein_coding MGP_BALBcJ_T0059931.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181101105 181129954 + Myt1 protein_coding processed_transcript MGP_BALBcJ_T0059932.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181101379 181138898 + MGP_BALBcJ_P0059932 Myt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059933.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181116754 181149500 + MGP_BALBcJ_P0059933 Myt1 protein_coding protein_coding MGP_BALBcJ_T0059934.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181130368 181161983 + Myt1 protein_coding retained_intron MGP_BALBcJ_T0059935.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181131656 181140428 + Myt1 protein_coding processed_transcript MGP_BALBcJ_T0059936.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181145085 181153986 + MGP_BALBcJ_P0059936 Myt1 protein_coding protein_coding MGP_BALBcJ_T0059937.1 MGP_BALBcJ_G0027011.1 mouse_genomes_project 2 181153445 181155884 + Myt1 protein_coding retained_intron MGP_BALBcJ_T0057790.1 MGP_BALBcJ_G0026512.1 mouse_genomes_project 2 130384327 130389597 + MGP_BALBcJ_P0057790 Prnd protein_coding protein_coding MGP_BALBcJ_T0057791.1 MGP_BALBcJ_G0026512.1 mouse_genomes_project 2 130384328 130389597 + MGP_BALBcJ_P0057791 Prnd protein_coding protein_coding MGP_BALBcJ_T0057792.1 MGP_BALBcJ_G0026512.1 mouse_genomes_project 2 130384328 130389597 + MGP_BALBcJ_P0057792 Prnd protein_coding protein_coding MGP_BALBcJ_T0057793.1 MGP_BALBcJ_G0026512.1 mouse_genomes_project 2 130384503 130389597 + MGP_BALBcJ_P0057793 Prnd protein_coding protein_coding MGP_BALBcJ_T0053879.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28225893 28267849 + MGP_BALBcJ_P0053879 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053880.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28225948 28227849 + Usp20 protein_coding retained_intron MGP_BALBcJ_T0053881.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28225977 28251855 + MGP_BALBcJ_P0053881 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053882.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28226011 28247210 + MGP_BALBcJ_P0053882 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053883.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28226043 28244361 + MGP_BALBcJ_P0053883 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053884.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28240092 28246879 + MGP_BALBcJ_P0053884 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053885.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28240193 28247210 + MGP_BALBcJ_P0053885 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053886.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28240479 28267845 + MGP_BALBcJ_P0053886 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053887.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28240485 28250656 + Usp20 protein_coding processed_transcript MGP_BALBcJ_T0053888.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28243124 28250685 + MGP_BALBcJ_P0053888 Usp20 protein_coding protein_coding MGP_BALBcJ_T0053889.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28246821 28247987 + Usp20 protein_coding retained_intron MGP_BALBcJ_T0053890.1 MGP_BALBcJ_G0025554.1 mouse_genomes_project 2 28264081 28265644 + Usp20 protein_coding retained_intron MGP_BALBcJ_T0001093.1 MGP_BALBcJ_G0001020.1 mouse_genomes_project 2 135151921 135152187 + TEC TEC MGP_BALBcJ_T0055274.1 MGP_BALBcJ_G0025805.1 mouse_genomes_project 2 70659102 70781771 - MGP_BALBcJ_P0055274 Ola1 protein_coding protein_coding MGP_BALBcJ_T0055275.1 MGP_BALBcJ_G0025805.1 mouse_genomes_project 2 70659501 70781750 - Ola1 protein_coding processed_transcript MGP_BALBcJ_T0055276.1 MGP_BALBcJ_G0025805.1 mouse_genomes_project 2 70659503 70780284 - MGP_BALBcJ_P0055276 Ola1 protein_coding protein_coding MGP_BALBcJ_T0055277.1 MGP_BALBcJ_G0025805.1 mouse_genomes_project 2 70704408 70781657 - MGP_BALBcJ_P0055277 Ola1 protein_coding protein_coding MGP_BALBcJ_T0055278.1 MGP_BALBcJ_G0025805.1 mouse_genomes_project 2 70765787 70781736 - Ola1 protein_coding processed_transcript MGP_BALBcJ_T0055279.1 MGP_BALBcJ_G0025805.1 mouse_genomes_project 2 70780194 70786248 - Ola1 protein_coding processed_transcript MGP_BALBcJ_T0013458.1 MGP_BALBcJ_G0011555.1 mouse_genomes_project 2 28908534 28909488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054496.1 MGP_BALBcJ_G0025670.1 mouse_genomes_project 2 34796914 34797754 + Gpr21 protein_coding processed_transcript MGP_BALBcJ_T0054498.1 MGP_BALBcJ_G0025670.1 mouse_genomes_project 2 34797208 34801186 + MGP_BALBcJ_P0054498 Gpr21 protein_coding protein_coding MGP_BALBcJ_T0058584.1 MGP_BALBcJ_G0026721.1 mouse_genomes_project 2 154586892 154594192 - MGP_BALBcJ_P0058584 Fam83c protein_coding protein_coding MGP_BALBcJ_T0013734.1 MGP_BALBcJ_G0011831.1 mouse_genomes_project 2 129299766 129301047 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007190.1 MGP_BALBcJ_G0005893.1 mouse_genomes_project 2 58374703 58385437 - Gm13582 lincRNA lincRNA MGP_BALBcJ_T0058926.1 MGP_BALBcJ_G0026779.1 mouse_genomes_project 2 159415996 159467561 - MGP_BALBcJ_P0058926 protein_coding protein_coding MGP_BALBcJ_T0003990.1 MGP_BALBcJ_G0003555.1 mouse_genomes_project 2 69789516 69794052 - Rapgef4os3 antisense antisense MGP_BALBcJ_T0055767.1 MGP_BALBcJ_G0025980.1 mouse_genomes_project 2 85139637 85140594 + MGP_BALBcJ_P0055767 Olfr1124 protein_coding protein_coding MGP_BALBcJ_T0013605.1 MGP_BALBcJ_G0011702.1 mouse_genomes_project 2 80147669 80148260 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099685.1 MGP_BALBcJ_G0037721.1 mouse_genomes_project 2 82221801 82221902 + Gm27942 snRNA snRNA MGP_BALBcJ_T0055854.1 MGP_BALBcJ_G0026053.1 mouse_genomes_project 2 86879766 86886234 - MGP_BALBcJ_P0055854 Olfr1219 protein_coding protein_coding MGP_BALBcJ_T0053519.1 MGP_BALBcJ_G0025499.1 mouse_genomes_project 2 25728379 25735949 - MGP_BALBcJ_P0053519 Cel protein_coding protein_coding MGP_BALBcJ_T0053520.1 MGP_BALBcJ_G0025499.1 mouse_genomes_project 2 25733101 25735990 - Cel protein_coding processed_transcript MGP_BALBcJ_T0003974.1 MGP_BALBcJ_G0003544.1 mouse_genomes_project 2 63637980 63642958 + Gm13618 antisense antisense MGP_BALBcJ_T0055086.1 MGP_BALBcJ_G0025770.1 mouse_genomes_project 2 66827711 66851668 + MGP_BALBcJ_P0055086 Dhrs9 protein_coding protein_coding MGP_BALBcJ_T0007103.1 MGP_BALBcJ_G0005826.1 mouse_genomes_project 2 2105096 2200325 - Gm26776 lincRNA lincRNA MGP_BALBcJ_T0053763.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27553708 27572172 - MGP_BALBcJ_P0053763 Sh3glb2 protein_coding protein_coding MGP_BALBcJ_T0053764.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27553708 27572248 - MGP_BALBcJ_P0053764 Sh3glb2 protein_coding protein_coding MGP_BALBcJ_T0053765.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27553710 27572221 - MGP_BALBcJ_P0053765 Sh3glb2 protein_coding protein_coding MGP_BALBcJ_T0053766.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27553710 27572197 - MGP_BALBcJ_P0053766 Sh3glb2 protein_coding protein_coding MGP_BALBcJ_T0053767.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27553710 27572264 - MGP_BALBcJ_P0053767 Sh3glb2 protein_coding protein_coding MGP_BALBcJ_T0053768.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27554034 27572237 - Sh3glb2 protein_coding retained_intron MGP_BALBcJ_T0053769.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27554040 27555001 - Sh3glb2 protein_coding processed_transcript MGP_BALBcJ_T0053770.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27554719 27572269 - Sh3glb2 protein_coding processed_transcript MGP_BALBcJ_T0053771.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27554785 27556556 - Sh3glb2 protein_coding retained_intron MGP_BALBcJ_T0053772.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27555007 27556487 - Sh3glb2 protein_coding retained_intron MGP_BALBcJ_T0053773.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27556967 27568296 - Sh3glb2 protein_coding retained_intron MGP_BALBcJ_T0053774.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27556989 27567811 - Sh3glb2 protein_coding retained_intron MGP_BALBcJ_T0053775.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27558382 27572177 - Sh3glb2 protein_coding processed_transcript MGP_BALBcJ_T0053776.1 MGP_BALBcJ_G0025539.1 mouse_genomes_project 2 27558639 27572192 - Sh3glb2 protein_coding retained_intron MGP_BALBcJ_T0059387.1 MGP_BALBcJ_G0026892.1 mouse_genomes_project 2 166575064 166601559 - MGP_BALBcJ_P0059387 Ube2v1 protein_coding unknown_likely_coding MGP_BALBcJ_T0059388.1 MGP_BALBcJ_G0026892.1 mouse_genomes_project 2 166576893 166601577 - MGP_BALBcJ_P0059388 Ube2v1 protein_coding protein_coding MGP_BALBcJ_T0059389.1 MGP_BALBcJ_G0026892.1 mouse_genomes_project 2 166584467 166601580 - Ube2v1 protein_coding retained_intron MGP_BALBcJ_T0101001.1 MGP_BALBcJ_G0039037.1 mouse_genomes_project 2 157179785 157179917 - Gm23925 snoRNA snoRNA MGP_BALBcJ_T0057522.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126875651 126953357 - MGP_BALBcJ_P0057522 Anapc1 protein_coding protein_coding MGP_BALBcJ_T0057523.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126880950 126883816 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057524.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126883246 126888519 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057525.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126888048 126893134 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057526.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126889413 126894312 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057527.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126894215 126895708 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057528.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126907862 126953342 - MGP_BALBcJ_P0057528 Anapc1 protein_coding protein_coding MGP_BALBcJ_T0057529.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126923734 126929191 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057530.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126925613 126930034 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057531.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126943090 126953341 - Anapc1 protein_coding processed_transcript MGP_BALBcJ_T0057532.1 MGP_BALBcJ_G0026450.1 mouse_genomes_project 2 126951014 126953320 - MGP_BALBcJ_P0057532 Anapc1 protein_coding protein_coding MGP_BALBcJ_T0010448.1 MGP_BALBcJ_G0008573.1 mouse_genomes_project 2 150558922 150559011 - Mir1953 miRNA miRNA MGP_BALBcJ_T0003897.1 MGP_BALBcJ_G0003486.1 mouse_genomes_project 2 18061502 18062449 + Gm13375 antisense antisense MGP_BALBcJ_T0013794.1 MGP_BALBcJ_G0011891.1 mouse_genomes_project 2 149630762 149631545 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053558.1 MGP_BALBcJ_G0025507.1 mouse_genomes_project 2 26086922 26095652 - MGP_BALBcJ_P0053558 Barhl1 protein_coding protein_coding MGP_BALBcJ_T0053559.1 MGP_BALBcJ_G0025507.1 mouse_genomes_project 2 26086927 26091739 - Barhl1 protein_coding processed_transcript MGP_BALBcJ_T0053560.1 MGP_BALBcJ_G0025507.1 mouse_genomes_project 2 26088212 26095671 - MGP_BALBcJ_P0053560 Barhl1 protein_coding protein_coding MGP_BALBcJ_T0053561.1 MGP_BALBcJ_G0025507.1 mouse_genomes_project 2 26088212 26095888 - MGP_BALBcJ_P0053561 Barhl1 protein_coding protein_coding MGP_BALBcJ_T0053562.1 MGP_BALBcJ_G0025507.1 mouse_genomes_project 2 26088883 26094745 - Barhl1 protein_coding processed_transcript MGP_BALBcJ_T0057993.1 MGP_BALBcJ_G0026559.1 mouse_genomes_project 2 142827076 142853602 - MGP_BALBcJ_P0057993 Ovol2 protein_coding protein_coding MGP_BALBcJ_T0057994.1 MGP_BALBcJ_G0026559.1 mouse_genomes_project 2 142827076 142854053 - MGP_BALBcJ_P0057994 Ovol2 protein_coding protein_coding MGP_BALBcJ_T0057995.1 MGP_BALBcJ_G0026559.1 mouse_genomes_project 2 142839640 142853233 - Ovol2 protein_coding processed_transcript MGP_BALBcJ_T0100934.1 MGP_BALBcJ_G0038970.1 mouse_genomes_project 2 28436093 28436217 + Gm22516 snoRNA snoRNA MGP_BALBcJ_T0054398.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32867223 33041936 + MGP_BALBcJ_P0054398 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0054399.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32891791 33041934 + MGP_BALBcJ_P0054399 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0054400.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32931146 33041934 + MGP_BALBcJ_P0054400 Dab2ip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054401.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32931287 33041938 + MGP_BALBcJ_P0054401 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0054402.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32931325 33041934 + MGP_BALBcJ_P0054402 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0054403.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32971978 33041936 + MGP_BALBcJ_P0054403 Dab2ip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054404.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 32972056 33020887 + Dab2ip protein_coding processed_transcript MGP_BALBcJ_T0054405.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 33002935 33041934 + MGP_BALBcJ_P0054405 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0054406.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 33003274 33039889 + MGP_BALBcJ_P0054406 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0054407.1 MGP_BALBcJ_G0025630.1 mouse_genomes_project 2 33021280 33041936 + MGP_BALBcJ_P0054407 Dab2ip protein_coding protein_coding MGP_BALBcJ_T0056533.1 MGP_BALBcJ_G0026203.1 mouse_genomes_project 2 103917120 103954135 - Dnajc24 protein_coding processed_transcript MGP_BALBcJ_T0056534.1 MGP_BALBcJ_G0026203.1 mouse_genomes_project 2 103917300 103954218 - MGP_BALBcJ_P0056534 Dnajc24 protein_coding protein_coding MGP_BALBcJ_T0056535.1 MGP_BALBcJ_G0026203.1 mouse_genomes_project 2 103917348 103954074 - Dnajc24 protein_coding processed_transcript MGP_BALBcJ_T0056536.1 MGP_BALBcJ_G0026203.1 mouse_genomes_project 2 103920774 103952950 - Dnajc24 protein_coding processed_transcript MGP_BALBcJ_T0003867.1 MGP_BALBcJ_G0003462.1 mouse_genomes_project 2 691436 693628 - Gm13185 antisense antisense MGP_BALBcJ_T0057090.1 MGP_BALBcJ_G0026354.1 mouse_genomes_project 2 119137958 119154328 - MGP_BALBcJ_P0057090 Tgm7 protein_coding protein_coding MGP_BALBcJ_T0054387.1 MGP_BALBcJ_G0025628.1 mouse_genomes_project 2 32680777 32702421 - MGP_BALBcJ_P0054387 4930402F06Rik protein_coding protein_coding MGP_BALBcJ_T0054388.1 MGP_BALBcJ_G0025628.1 mouse_genomes_project 2 32680797 32702303 - MGP_BALBcJ_P0054388 4930402F06Rik protein_coding protein_coding MGP_BALBcJ_T0017699.1 MGP_BALBcJ_G0015335.1 mouse_genomes_project 2 15123911 15126332 - 1810059C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0013766.1 MGP_BALBcJ_G0011863.1 mouse_genomes_project 2 142385449 142385780 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0054465.1 MGP_BALBcJ_G0025660.1 mouse_genomes_project 2 34378201 34379170 - MGP_BALBcJ_P0054465 Olfr361 protein_coding protein_coding MGP_BALBcJ_T0055843.1 MGP_BALBcJ_G0026044.1 mouse_genomes_project 2 86734393 86735329 - MGP_BALBcJ_P0055843 Olfr1211 protein_coding protein_coding MGP_BALBcJ_T0053264.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23445990 23474120 + MGP_BALBcJ_P0053264 Gpsm1 protein_coding protein_coding MGP_BALBcJ_T0053265.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23446067 23474120 + MGP_BALBcJ_P0053265 Gpsm1 protein_coding protein_coding MGP_BALBcJ_T0053266.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23450285 23474120 + MGP_BALBcJ_P0053266 Gpsm1 protein_coding protein_coding MGP_BALBcJ_T0053267.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23454226 23474120 + MGP_BALBcJ_P0053267 Gpsm1 protein_coding protein_coding MGP_BALBcJ_T0053268.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23455968 23458322 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0053269.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23456479 23466333 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0053270.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23456669 23465803 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0053271.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23461532 23474120 + MGP_BALBcJ_P0053271 Gpsm1 protein_coding protein_coding MGP_BALBcJ_T0053272.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23461575 23466414 + MGP_BALBcJ_P0053272 Gpsm1 protein_coding protein_coding MGP_BALBcJ_T0053273.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23465313 23471214 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0053274.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23465330 23470607 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0053275.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23468171 23473158 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0053276.1 MGP_BALBcJ_G0025455.1 mouse_genomes_project 2 23470120 23472793 + Gpsm1 protein_coding processed_transcript MGP_BALBcJ_T0007270.1 MGP_BALBcJ_G0005959.1 mouse_genomes_project 2 112248665 112249927 - Gm29234 lincRNA lincRNA MGP_BALBcJ_T0054099.1 MGP_BALBcJ_G0025582.1 mouse_genomes_project 2 29725039 29731536 + MGP_BALBcJ_P0054099 Naif1 protein_coding protein_coding MGP_BALBcJ_T0007412.1 MGP_BALBcJ_G0006077.1 mouse_genomes_project 2 180158370 180159746 + Gm14339 lincRNA lincRNA MGP_BALBcJ_T0013821.1 MGP_BALBcJ_G0011918.1 mouse_genomes_project 2 155665566 155666110 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0057261.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455031 120473078 - MGP_BALBcJ_P0057261 protein_coding protein_coding MGP_BALBcJ_T0057262.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455032 120475171 - MGP_BALBcJ_P0057262 protein_coding protein_coding MGP_BALBcJ_T0057263.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455267 120465700 - MGP_BALBcJ_P0057263 protein_coding protein_coding MGP_BALBcJ_T0057264.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455267 120475415 - MGP_BALBcJ_P0057264 protein_coding protein_coding MGP_BALBcJ_T0057265.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455267 120475085 - MGP_BALBcJ_P0057265 protein_coding protein_coding MGP_BALBcJ_T0057266.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455338 120464351 - MGP_BALBcJ_P0057266 protein_coding protein_coding MGP_BALBcJ_T0057267.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455338 120464377 - MGP_BALBcJ_P0057267 protein_coding protein_coding MGP_BALBcJ_T0057268.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455492 120475385 - MGP_BALBcJ_P0057268 protein_coding protein_coding MGP_BALBcJ_T0057269.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455527 120463331 - MGP_BALBcJ_P0057269 protein_coding protein_coding MGP_BALBcJ_T0057270.1 MGP_BALBcJ_G0026388.1 mouse_genomes_project 2 120455643 120460239 - protein_coding retained_intron MGP_BALBcJ_T0099660.1 MGP_BALBcJ_G0037696.1 mouse_genomes_project 2 17375125 17375232 + Gm23970 snRNA snRNA MGP_BALBcJ_T0052502.1 MGP_BALBcJ_G0025317.1 mouse_genomes_project 2 8595856 8613955 - MGP_BALBcJ_P0052502 Rbm17 protein_coding protein_coding MGP_BALBcJ_T0052503.1 MGP_BALBcJ_G0025317.1 mouse_genomes_project 2 8595858 8596410 - Rbm17 protein_coding retained_intron MGP_BALBcJ_T0052504.1 MGP_BALBcJ_G0025317.1 mouse_genomes_project 2 8595860 8597588 - Rbm17 protein_coding retained_intron MGP_BALBcJ_T0052505.1 MGP_BALBcJ_G0025317.1 mouse_genomes_project 2 8597810 8600155 - Rbm17 protein_coding retained_intron MGP_BALBcJ_T0052506.1 MGP_BALBcJ_G0025317.1 mouse_genomes_project 2 8600088 8602032 - Rbm17 protein_coding retained_intron MGP_BALBcJ_T0052507.1 MGP_BALBcJ_G0025317.1 mouse_genomes_project 2 8607375 8614847 - MGP_BALBcJ_P0052507 Rbm17 protein_coding protein_coding MGP_BALBcJ_T0054704.1 MGP_BALBcJ_G0025700.1 mouse_genomes_project 2 49348744 49359748 - MGP_BALBcJ_P0054704 Rbm43 protein_coding protein_coding MGP_BALBcJ_T0054705.1 MGP_BALBcJ_G0025700.1 mouse_genomes_project 2 49348744 49359904 - MGP_BALBcJ_P0054705 Rbm43 protein_coding protein_coding MGP_BALBcJ_T0054706.1 MGP_BALBcJ_G0025700.1 mouse_genomes_project 2 49348747 49359385 - MGP_BALBcJ_P0054706 Rbm43 protein_coding protein_coding MGP_BALBcJ_T0054707.1 MGP_BALBcJ_G0025700.1 mouse_genomes_project 2 49349684 49351323 - Rbm43 protein_coding processed_transcript MGP_BALBcJ_T0054708.1 MGP_BALBcJ_G0025700.1 mouse_genomes_project 2 49349949 49357632 - Rbm43 protein_coding processed_transcript MGP_BALBcJ_T0054709.1 MGP_BALBcJ_G0025700.1 mouse_genomes_project 2 49350168 49359415 - Rbm43 protein_coding processed_transcript MGP_BALBcJ_T0057323.1 MGP_BALBcJ_G0026400.1 mouse_genomes_project 2 123375097 123386090 + MGP_BALBcJ_P0057323 Ctxn2 protein_coding protein_coding MGP_BALBcJ_T0017749.1 MGP_BALBcJ_G0015366.1 mouse_genomes_project 2 69281322 69291245 + Gm13662 processed_transcript processed_transcript MGP_BALBcJ_T0053949.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 28938063 28949371 + Abl1 protein_coding retained_intron MGP_BALBcJ_T0053950.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 28938224 28959298 + Abl1 protein_coding processed_transcript MGP_BALBcJ_T0053951.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 28938238 29059274 + MGP_BALBcJ_P0053951 Abl1 protein_coding protein_coding MGP_BALBcJ_T0053952.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 28938239 29056072 + MGP_BALBcJ_P0053952 Abl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053953.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 28939152 29034125 + MGP_BALBcJ_P0053953 Abl1 protein_coding protein_coding MGP_BALBcJ_T0053954.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 28939298 29034757 + MGP_BALBcJ_P0053954 Abl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053955.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 29014798 29059960 + MGP_BALBcJ_P0053955 Abl1 protein_coding protein_coding MGP_BALBcJ_T0053956.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 29015028 29034757 + MGP_BALBcJ_P0053956 Abl1 protein_coding protein_coding MGP_BALBcJ_T0053957.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 29045903 29050303 + Abl1 protein_coding retained_intron MGP_BALBcJ_T0053958.1 MGP_BALBcJ_G0025563.1 mouse_genomes_project 2 29052378 29053725 + Abl1 protein_coding retained_intron MGP_BALBcJ_T0100993.1 MGP_BALBcJ_G0039029.1 mouse_genomes_project 2 149886442 149886578 - Gm23005 snoRNA snoRNA MGP_BALBcJ_T0099675.1 MGP_BALBcJ_G0037711.1 mouse_genomes_project 2 50732214 50732320 - Gm25898 snRNA snRNA MGP_BALBcJ_T0054469.1 MGP_BALBcJ_G0025664.1 mouse_genomes_project 2 34629512 34640001 - MGP_BALBcJ_P0054469 Pdcl protein_coding protein_coding MGP_BALBcJ_T0054470.1 MGP_BALBcJ_G0025664.1 mouse_genomes_project 2 34630026 34639922 - MGP_BALBcJ_P0054470 Pdcl protein_coding protein_coding MGP_BALBcJ_T0054471.1 MGP_BALBcJ_G0025664.1 mouse_genomes_project 2 34631557 34639858 - MGP_BALBcJ_P0054471 Pdcl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054472.1 MGP_BALBcJ_G0025664.1 mouse_genomes_project 2 34631596 34639865 - MGP_BALBcJ_P0054472 Pdcl protein_coding protein_coding MGP_BALBcJ_T0102440.1 MGP_BALBcJ_G0040256.1 mouse_genomes_project 2 128242859 128243627 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0059000.1 MGP_BALBcJ_G0026794.1 mouse_genomes_project 2 162072505 162195712 + MGP_BALBcJ_P0059000 Tox2 protein_coding protein_coding MGP_BALBcJ_T0059001.1 MGP_BALBcJ_G0026794.1 mouse_genomes_project 2 162073933 162145857 + MGP_BALBcJ_P0059001 Tox2 protein_coding protein_coding MGP_BALBcJ_T0059002.1 MGP_BALBcJ_G0026794.1 mouse_genomes_project 2 162095227 162194844 + MGP_BALBcJ_P0059002 Tox2 protein_coding protein_coding MGP_BALBcJ_T0059003.1 MGP_BALBcJ_G0026794.1 mouse_genomes_project 2 162095318 162194644 + MGP_BALBcJ_P0059003 Tox2 protein_coding protein_coding MGP_BALBcJ_T0059004.1 MGP_BALBcJ_G0026794.1 mouse_genomes_project 2 162191919 162194644 + MGP_BALBcJ_P0059004 Tox2 protein_coding protein_coding MGP_BALBcJ_T0058515.1 MGP_BALBcJ_G0026708.1 mouse_genomes_project 2 154131582 154136925 + MGP_BALBcJ_P0058515 Trp53inp2 protein_coding protein_coding MGP_BALBcJ_T0058516.1 MGP_BALBcJ_G0026708.1 mouse_genomes_project 2 154132337 154140644 + MGP_BALBcJ_P0058516 Trp53inp2 protein_coding protein_coding MGP_BALBcJ_T0058517.1 MGP_BALBcJ_G0026708.1 mouse_genomes_project 2 154132363 154137549 + MGP_BALBcJ_P0058517 Trp53inp2 protein_coding protein_coding MGP_BALBcJ_T0058518.1 MGP_BALBcJ_G0026708.1 mouse_genomes_project 2 154132383 154136824 + Trp53inp2 protein_coding retained_intron MGP_BALBcJ_T0058519.1 MGP_BALBcJ_G0026708.1 mouse_genomes_project 2 154132725 154136836 + MGP_BALBcJ_P0058519 Trp53inp2 protein_coding protein_coding MGP_BALBcJ_T0001021.1 MGP_BALBcJ_G0000949.1 mouse_genomes_project 2 8238157 8240722 + TEC TEC MGP_BALBcJ_T0058165.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149459212 149469290 - Abhd12 protein_coding processed_transcript MGP_BALBcJ_T0058166.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149459212 149538411 - MGP_BALBcJ_P0058166 Abhd12 protein_coding protein_coding MGP_BALBcJ_T0058167.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149459236 149538401 - MGP_BALBcJ_P0058167 Abhd12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058168.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149459835 149466442 - MGP_BALBcJ_P0058168 Abhd12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058169.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149464078 149538332 - Abhd12 protein_coding processed_transcript MGP_BALBcJ_T0058170.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149469752 149478210 - Abhd12 protein_coding retained_intron MGP_BALBcJ_T0058171.1 MGP_BALBcJ_G0026609.1 mouse_genomes_project 2 149473049 149538317 - MGP_BALBcJ_P0058171 Abhd12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0056662.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110630462 110651875 - Ryr3 protein_coding processed_transcript MGP_BALBcJ_T0056663.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110630471 111205520 - MGP_BALBcJ_P0056663 Ryr3 protein_coding unknown_likely_coding MGP_BALBcJ_T0056664.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110630487 111024783 - MGP_BALBcJ_P0056664 Ryr3 protein_coding protein_coding MGP_BALBcJ_T0056665.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110630487 111205581 - MGP_BALBcJ_P0056665 Ryr3 protein_coding protein_coding MGP_BALBcJ_T0056666.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110631153 111205598 - Ryr3 protein_coding processed_transcript MGP_BALBcJ_T0056667.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110635735 110639672 - Ryr3 protein_coding processed_transcript MGP_BALBcJ_T0056668.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110858744 110903399 - Ryr3 protein_coding retained_intron MGP_BALBcJ_T0056669.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110959792 111205592 - Ryr3 protein_coding retained_intron MGP_BALBcJ_T0056670.1 MGP_BALBcJ_G0026268.1 mouse_genomes_project 2 110990774 111205626 - Ryr3 protein_coding retained_intron MGP_BALBcJ_T0099715.1 MGP_BALBcJ_G0037751.1 mouse_genomes_project 2 180499743 180499847 + Gm24892 snRNA snRNA MGP_BALBcJ_T0004127.1 MGP_BALBcJ_G0003653.1 mouse_genomes_project 2 157437402 157438313 - Gm14205 antisense antisense MGP_BALBcJ_T0013413.1 MGP_BALBcJ_G0011510.1 mouse_genomes_project 2 12446606 12447576 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004059.1 MGP_BALBcJ_G0003601.1 mouse_genomes_project 2 124907106 124915136 + Gm27003 antisense antisense MGP_BALBcJ_T0011482.1 MGP_BALBcJ_G0009607.1 mouse_genomes_project 2 69875960 69876268 + Zakit misc_RNA misc_RNA MGP_BALBcJ_T0013562.1 MGP_BALBcJ_G0011659.1 mouse_genomes_project 2 65546693 65547232 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017793.1 MGP_BALBcJ_G0015393.1 mouse_genomes_project 2 111384688 111394501 + Gm13965 processed_transcript processed_transcript MGP_BALBcJ_T0058467.1 MGP_BALBcJ_G0026698.1 mouse_genomes_project 2 153356024 153399546 + Chmp4b protein_coding processed_transcript MGP_BALBcJ_T0058468.1 MGP_BALBcJ_G0026698.1 mouse_genomes_project 2 153361270 153399551 + MGP_BALBcJ_P0058468 Chmp4b protein_coding protein_coding MGP_BALBcJ_T0058469.1 MGP_BALBcJ_G0026698.1 mouse_genomes_project 2 153395045 153399047 + Chmp4b protein_coding retained_intron MGP_BALBcJ_T0102028.1 MGP_BALBcJ_G0039854.1 mouse_genomes_project 2 180709174 180712504 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102029.1 MGP_BALBcJ_G0039854.1 mouse_genomes_project 2 180709335 180712117 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0013438.1 MGP_BALBcJ_G0011535.1 mouse_genomes_project 2 19924884 19925424 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053182.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22730134 22732053 - MGP_BALBcJ_P0053182 Tmem141 protein_coding protein_coding MGP_BALBcJ_T0053183.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22730134 22732073 - MGP_BALBcJ_P0053183 Tmem141 protein_coding protein_coding MGP_BALBcJ_T0053184.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22730171 22732031 - Tmem141 protein_coding processed_transcript MGP_BALBcJ_T0053185.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22730394 22731848 - Tmem141 protein_coding processed_transcript MGP_BALBcJ_T0053186.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22731114 22732039 - Tmem141 protein_coding processed_transcript MGP_BALBcJ_T0053187.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22731114 22732036 - Tmem141 protein_coding processed_transcript MGP_BALBcJ_T0053188.1 MGP_BALBcJ_G0025433.1 mouse_genomes_project 2 22731561 22731975 - Tmem141 protein_coding processed_transcript MGP_BALBcJ_T0013850.1 MGP_BALBcJ_G0011947.1 mouse_genomes_project 2 167230531 167230961 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017716.1 MGP_BALBcJ_G0015345.1 mouse_genomes_project 2 25192368 25197389 - Gm13372 processed_transcript processed_transcript MGP_BALBcJ_T0003935.1 MGP_BALBcJ_G0003514.1 mouse_genomes_project 2 30122787 30124770 + Gm13524 antisense antisense MGP_BALBcJ_T0010429.1 MGP_BALBcJ_G0008554.1 mouse_genomes_project 2 112123434 112123489 - Mir7002 miRNA miRNA MGP_BALBcJ_T0013433.1 MGP_BALBcJ_G0011530.1 mouse_genomes_project 2 17127860 17128659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055760.1 MGP_BALBcJ_G0025973.1 mouse_genomes_project 2 84906687 84939689 + MGP_BALBcJ_P0055760 Olfr1115 protein_coding protein_coding MGP_BALBcJ_T0056744.1 MGP_BALBcJ_G0026286.1 mouse_genomes_project 2 116228207 116281059 - MGP_BALBcJ_P0056744 Fsip1 protein_coding protein_coding MGP_BALBcJ_T0056745.1 MGP_BALBcJ_G0026286.1 mouse_genomes_project 2 116268362 116281049 - MGP_BALBcJ_P0056745 Fsip1 protein_coding protein_coding MGP_BALBcJ_T0057081.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119062758 119081948 - MGP_BALBcJ_P0057081 Epb42 protein_coding protein_coding MGP_BALBcJ_T0057082.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119063086 119072126 - Epb42 protein_coding processed_transcript MGP_BALBcJ_T0057083.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119063086 119067668 - Epb42 protein_coding processed_transcript MGP_BALBcJ_T0057084.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119064271 119066878 - Epb42 protein_coding retained_intron MGP_BALBcJ_T0057085.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119068510 119081711 - MGP_BALBcJ_P0057085 Epb42 protein_coding protein_coding MGP_BALBcJ_T0057086.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119072572 119081557 - Epb42 protein_coding processed_transcript MGP_BALBcJ_T0057087.1 MGP_BALBcJ_G0026352.1 mouse_genomes_project 2 119078287 119081621 - Epb42 protein_coding processed_transcript MGP_BALBcJ_T0055746.1 MGP_BALBcJ_G0025959.1 mouse_genomes_project 2 84597116 84598055 - MGP_BALBcJ_P0055746 Olfr1099 protein_coding protein_coding MGP_BALBcJ_T0007352.1 MGP_BALBcJ_G0006024.1 mouse_genomes_project 2 158859076 158884064 + 9130015L21Rik lincRNA lincRNA MGP_BALBcJ_T0004143.1 MGP_BALBcJ_G0003664.1 mouse_genomes_project 2 163650615 163667087 - Gm11457 antisense antisense MGP_BALBcJ_T0004144.1 MGP_BALBcJ_G0003664.1 mouse_genomes_project 2 163650625 163667092 - Gm11457 antisense antisense MGP_BALBcJ_T0004145.1 MGP_BALBcJ_G0003664.1 mouse_genomes_project 2 163650637 163667134 - Gm11457 antisense antisense MGP_BALBcJ_T0052738.1 MGP_BALBcJ_G0025357.1 mouse_genomes_project 2 16748803 16751635 + MGP_BALBcJ_P0052738 Otud1 protein_coding protein_coding MGP_BALBcJ_T0010459.1 MGP_BALBcJ_G0008584.1 mouse_genomes_project 2 159472957 159473083 + Gm23968 miRNA miRNA MGP_BALBcJ_T0017752.1 MGP_BALBcJ_G0015369.1 mouse_genomes_project 2 73284379 73289646 + E030042O20Rik processed_transcript processed_transcript MGP_BALBcJ_T0003883.1 MGP_BALBcJ_G0003474.1 mouse_genomes_project 2 9356832 9368769 + E030013I19Rik antisense antisense MGP_BALBcJ_T0003884.1 MGP_BALBcJ_G0003474.1 mouse_genomes_project 2 9357205 9369784 + E030013I19Rik antisense antisense MGP_BALBcJ_T0001036.1 MGP_BALBcJ_G0000964.1 mouse_genomes_project 2 10317288 10318977 - TEC TEC MGP_BALBcJ_T0017756.1 MGP_BALBcJ_G0015373.1 mouse_genomes_project 2 82589669 82595827 - processed_transcript processed_transcript MGP_BALBcJ_T0058830.1 MGP_BALBcJ_G0026758.1 mouse_genomes_project 2 156356876 156366779 - MGP_BALBcJ_P0058830 Blcap protein_coding protein_coding MGP_BALBcJ_T0058831.1 MGP_BALBcJ_G0026758.1 mouse_genomes_project 2 156356876 156366755 - MGP_BALBcJ_P0058831 Blcap protein_coding protein_coding MGP_BALBcJ_T0058832.1 MGP_BALBcJ_G0026758.1 mouse_genomes_project 2 156358615 156375809 - MGP_BALBcJ_P0058832 Blcap protein_coding protein_coding MGP_BALBcJ_T0058833.1 MGP_BALBcJ_G0026758.1 mouse_genomes_project 2 156358701 156360521 - Blcap protein_coding processed_transcript MGP_BALBcJ_T0058844.1 MGP_BALBcJ_G0026758.1 mouse_genomes_project 2 156366008 156366749 - Blcap protein_coding processed_transcript MGP_BALBcJ_T0058845.1 MGP_BALBcJ_G0026758.1 mouse_genomes_project 2 156367292 156375809 - Blcap protein_coding processed_transcript MGP_BALBcJ_T0001088.1 MGP_BALBcJ_G0001016.1 mouse_genomes_project 2 116061903 116063525 + TEC TEC MGP_BALBcJ_T0053209.1 MGP_BALBcJ_G0025445.1 mouse_genomes_project 2 22940906 22943291 + MGP_BALBcJ_P0053209 Lcn9 protein_coding protein_coding MGP_BALBcJ_T0013543.1 MGP_BALBcJ_G0011640.1 mouse_genomes_project 2 57473417 57473726 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055634.1 MGP_BALBcJ_G0025884.1 mouse_genomes_project 2 82347780 82350984 + MGP_BALBcJ_P0055634 Timm10 protein_coding protein_coding MGP_BALBcJ_T0055635.1 MGP_BALBcJ_G0025884.1 mouse_genomes_project 2 82348167 82350884 + MGP_BALBcJ_P0055635 Timm10 protein_coding protein_coding MGP_BALBcJ_T0001085.1 MGP_BALBcJ_G0001013.1 mouse_genomes_project 2 93698481 93718330 + TEC TEC MGP_BALBcJ_T0054812.1 MGP_BALBcJ_G0025724.1 mouse_genomes_project 2 56284849 56325642 + MGP_BALBcJ_P0054812 Gm11099 protein_coding protein_coding MGP_BALBcJ_T0057207.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119626012 119892861 - MGP_BALBcJ_P0057207 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057208.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119626018 119851688 - MGP_BALBcJ_P0057208 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057209.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119626018 119666617 - MGP_BALBcJ_P0057209 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057210.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119626018 119893117 - MGP_BALBcJ_P0057210 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057211.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119628227 119636145 - MGP_BALBcJ_P0057211 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057212.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119628785 119851688 - MGP_BALBcJ_P0057212 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057213.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119628787 119893053 - MGP_BALBcJ_P0057213 Frmd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057214.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119628788 119893022 - MGP_BALBcJ_P0057214 Frmd5 protein_coding protein_coding MGP_BALBcJ_T0057215.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119629529 119639189 - Frmd5 protein_coding processed_transcript MGP_BALBcJ_T0057216.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119641813 119893087 - Frmd5 protein_coding retained_intron MGP_BALBcJ_T0057217.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119649345 119892902 - MGP_BALBcJ_P0057217 Frmd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057218.1 MGP_BALBcJ_G0026372.1 mouse_genomes_project 2 119649397 119664188 - Frmd5 protein_coding processed_transcript MGP_BALBcJ_T0056622.1 MGP_BALBcJ_G0026242.1 mouse_genomes_project 2 109744484 109745423 + MGP_BALBcJ_P0056622 Olfr1301 protein_coding protein_coding MGP_BALBcJ_T0098578.1 MGP_BALBcJ_G0036632.1 mouse_genomes_project 2 118695256 118695381 - n-R5s205 rRNA rRNA MGP_BALBcJ_T0056555.1 MGP_BALBcJ_G0026209.1 mouse_genomes_project 2 107197092 107258200 + MGP_BALBcJ_P0056555 Kif18a protein_coding protein_coding MGP_BALBcJ_T0056556.1 MGP_BALBcJ_G0026209.1 mouse_genomes_project 2 107197180 107212661 + Kif18a protein_coding retained_intron MGP_BALBcJ_T0056557.1 MGP_BALBcJ_G0026209.1 mouse_genomes_project 2 107197194 107224388 + Kif18a protein_coding retained_intron MGP_BALBcJ_T0056558.1 MGP_BALBcJ_G0026209.1 mouse_genomes_project 2 107197206 107227721 + Kif18a protein_coding retained_intron MGP_BALBcJ_T0056559.1 MGP_BALBcJ_G0026209.1 mouse_genomes_project 2 107197223 107212393 + Kif18a protein_coding retained_intron MGP_BALBcJ_T0056560.1 MGP_BALBcJ_G0026209.1 mouse_genomes_project 2 107208623 107212661 + Kif18a protein_coding retained_intron MGP_BALBcJ_T0059192.1 MGP_BALBcJ_G0026859.1 mouse_genomes_project 2 163846831 163854957 + MGP_BALBcJ_P0059192 Mmp9 protein_coding protein_coding MGP_BALBcJ_T0059193.1 MGP_BALBcJ_G0026859.1 mouse_genomes_project 2 163854282 163861927 + MGP_BALBcJ_P0059193 Mmp9 protein_coding protein_coding MGP_BALBcJ_T0059194.1 MGP_BALBcJ_G0026859.1 mouse_genomes_project 2 163856763 163857330 + Mmp9 protein_coding retained_intron MGP_BALBcJ_T0059195.1 MGP_BALBcJ_G0026859.1 mouse_genomes_project 2 163860462 163861927 + Mmp9 protein_coding processed_transcript MGP_BALBcJ_T0017859.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157173688 157176832 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0017860.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157175295 157181499 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0017861.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157175753 157181569 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0017862.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157175753 157181508 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0017863.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157175753 157181511 - Snhg17 processed_transcript retained_intron MGP_BALBcJ_T0017864.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157175773 157181502 - Snhg17 processed_transcript retained_intron MGP_BALBcJ_T0017865.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157176010 157178452 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0017866.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157179226 157181464 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0017867.1 MGP_BALBcJ_G0015424.1 mouse_genomes_project 2 157180855 157181531 - Snhg17 processed_transcript lincRNA MGP_BALBcJ_T0059634.1 MGP_BALBcJ_G0026960.1 mouse_genomes_project 2 179366975 179383559 + protein_coding retained_intron MGP_BALBcJ_T0059635.1 MGP_BALBcJ_G0026960.1 mouse_genomes_project 2 179366978 179383588 + MGP_BALBcJ_P0059635 protein_coding unknown_likely_coding MGP_BALBcJ_T0059636.1 MGP_BALBcJ_G0026960.1 mouse_genomes_project 2 179366979 179378354 + protein_coding retained_intron MGP_BALBcJ_T0059637.1 MGP_BALBcJ_G0026960.1 mouse_genomes_project 2 179366979 179383566 + MGP_BALBcJ_P0059637 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059638.1 MGP_BALBcJ_G0026960.1 mouse_genomes_project 2 179376478 179380540 + protein_coding retained_intron MGP_BALBcJ_T0059639.1 MGP_BALBcJ_G0026960.1 mouse_genomes_project 2 179380654 179383564 + protein_coding retained_intron MGP_BALBcJ_T0010336.1 MGP_BALBcJ_G0008461.1 mouse_genomes_project 2 7512572 7512674 + Gm24342 miRNA miRNA MGP_BALBcJ_T0055062.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66305872 66563382 + MGP_BALBcJ_P0055062 Cers6 protein_coding protein_coding MGP_BALBcJ_T0055063.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66305873 66307156 + Cers6 protein_coding retained_intron MGP_BALBcJ_T0055064.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66305881 66521651 + Cers6 protein_coding retained_intron MGP_BALBcJ_T0055065.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66305901 66379700 + Cers6 protein_coding retained_intron MGP_BALBcJ_T0055066.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66306017 66557796 + MGP_BALBcJ_P0055066 Cers6 protein_coding protein_coding MGP_BALBcJ_T0055067.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66392247 66500768 + Cers6 protein_coding retained_intron MGP_BALBcJ_T0055068.1 MGP_BALBcJ_G0025765.1 mouse_genomes_project 2 66404898 66501124 + Cers6 protein_coding retained_intron MGP_BALBcJ_T0013666.1 MGP_BALBcJ_G0011763.1 mouse_genomes_project 2 101736047 101736779 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0058236.1 MGP_BALBcJ_G0026624.1 mouse_genomes_project 2 150596226 150601098 + MGP_BALBcJ_P0058236 Slc52a3 protein_coding protein_coding MGP_BALBcJ_T0010412.1 MGP_BALBcJ_G0008537.1 mouse_genomes_project 2 89206423 89206520 - Gm22071 miRNA miRNA MGP_BALBcJ_T0059316.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165855620 165894841 + Cse1l protein_coding processed_transcript MGP_BALBcJ_T0059317.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165855639 165896680 + MGP_BALBcJ_P0059317 Cse1l protein_coding protein_coding MGP_BALBcJ_T0059318.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165855691 165896392 + MGP_BALBcJ_P0059318 Cse1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059319.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165864918 165896084 + MGP_BALBcJ_P0059319 Cse1l protein_coding protein_coding MGP_BALBcJ_T0059320.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165877887 165896099 + MGP_BALBcJ_P0059320 Cse1l protein_coding protein_coding MGP_BALBcJ_T0059321.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165877922 165882761 + Cse1l protein_coding retained_intron MGP_BALBcJ_T0059322.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165878081 165885412 + Cse1l protein_coding retained_intron MGP_BALBcJ_T0059323.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165878125 165887746 + Cse1l protein_coding processed_transcript MGP_BALBcJ_T0059324.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165885079 165895144 + Cse1l protein_coding retained_intron MGP_BALBcJ_T0059325.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165885106 165891745 + MGP_BALBcJ_P0059325 Cse1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0059326.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165887417 165891541 + Cse1l protein_coding retained_intron MGP_BALBcJ_T0059327.1 MGP_BALBcJ_G0026880.1 mouse_genomes_project 2 165891123 165892110 + Cse1l protein_coding retained_intron MGP_BALBcJ_T0013687.1 MGP_BALBcJ_G0011784.1 mouse_genomes_project 2 107714931 107715669 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055822.1 MGP_BALBcJ_G0026024.1 mouse_genomes_project 2 86230556 86232837 - protein_coding processed_transcript MGP_BALBcJ_T0059061.1 MGP_BALBcJ_G0026812.1 mouse_genomes_project 2 163030280 163037772 - MGP_BALBcJ_P0059061 Kcns1 protein_coding protein_coding MGP_BALBcJ_T0056087.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89331560 89424320 + MGP_BALBcJ_P0056087 Ckap5 protein_coding protein_coding MGP_BALBcJ_T0056088.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89331776 89359187 + Ckap5 protein_coding processed_transcript MGP_BALBcJ_T0056089.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89350133 89368984 + Ckap5 protein_coding retained_intron MGP_BALBcJ_T0056090.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89350135 89424318 + MGP_BALBcJ_P0056090 Ckap5 protein_coding protein_coding MGP_BALBcJ_T0056091.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89350135 89424318 + MGP_BALBcJ_P0056091 Ckap5 protein_coding protein_coding MGP_BALBcJ_T0056092.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89350146 89424319 + MGP_BALBcJ_P0056092 Ckap5 protein_coding protein_coding MGP_BALBcJ_T0056093.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89359062 89368987 + Ckap5 protein_coding retained_intron MGP_BALBcJ_T0056094.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89398710 89410288 + Ckap5 protein_coding processed_transcript MGP_BALBcJ_T0056095.1 MGP_BALBcJ_G0026121.1 mouse_genomes_project 2 89400033 89404634 + Ckap5 protein_coding retained_intron MGP_BALBcJ_T0057640.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128817360 128831974 + Vps16 protein_coding retained_intron MGP_BALBcJ_T0057641.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128817386 128837771 + MGP_BALBcJ_P0057641 Vps16 protein_coding protein_coding MGP_BALBcJ_T0057642.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128817386 128833438 + MGP_BALBcJ_P0057642 Vps16 protein_coding protein_coding MGP_BALBcJ_T0057643.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128817425 128833817 + Vps16 protein_coding processed_transcript MGP_BALBcJ_T0057644.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128831155 128832588 + Vps16 protein_coding retained_intron MGP_BALBcJ_T0057645.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128833150 128835226 + Vps16 protein_coding retained_intron MGP_BALBcJ_T0057646.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128833842 128834828 + Vps16 protein_coding retained_intron MGP_BALBcJ_T0057647.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128835128 128836920 + Vps16 protein_coding retained_intron MGP_BALBcJ_T0057648.1 MGP_BALBcJ_G0026481.1 mouse_genomes_project 2 128836687 128837236 + Vps16 protein_coding retained_intron MGP_BALBcJ_T0013707.1 MGP_BALBcJ_G0011804.1 mouse_genomes_project 2 116507641 116508500 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0053856.1 MGP_BALBcJ_G0025549.1 mouse_genomes_project 2 28072266 28119068 + MGP_BALBcJ_P0053856 Prrx2 protein_coding protein_coding MGP_BALBcJ_T0053857.1 MGP_BALBcJ_G0025549.1 mouse_genomes_project 2 28082353 28119097 + MGP_BALBcJ_P0053857 Prrx2 protein_coding protein_coding MGP_BALBcJ_T0053858.1 MGP_BALBcJ_G0025549.1 mouse_genomes_project 2 28082738 28116499 + Prrx2 protein_coding retained_intron MGP_BALBcJ_T0053859.1 MGP_BALBcJ_G0025549.1 mouse_genomes_project 2 28117160 28118966 + Prrx2 protein_coding retained_intron MGP_BALBcJ_T0054334.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32240336 32257706 - MGP_BALBcJ_P0054334 Traf1 protein_coding protein_coding MGP_BALBcJ_T0054335.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32241834 32261128 - MGP_BALBcJ_P0054335 Traf1 protein_coding protein_coding MGP_BALBcJ_T0054336.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32241836 32261315 - MGP_BALBcJ_P0054336 Traf1 protein_coding protein_coding MGP_BALBcJ_T0054337.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32247108 32261125 - Traf1 protein_coding processed_transcript MGP_BALBcJ_T0054338.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32255615 32257679 - MGP_BALBcJ_P0054338 Traf1 protein_coding protein_coding MGP_BALBcJ_T0054339.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32255724 32257704 - Traf1 protein_coding retained_intron MGP_BALBcJ_T0054340.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32255736 32258448 - Traf1 protein_coding processed_transcript MGP_BALBcJ_T0054341.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32257089 32261140 - Traf1 protein_coding retained_intron MGP_BALBcJ_T0054342.1 MGP_BALBcJ_G0025620.1 mouse_genomes_project 2 32257694 32261105 - Traf1 protein_coding processed_transcript MGP_BALBcJ_T0054161.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 29996146 30030214 + MGP_BALBcJ_P0054161 Sh2d3c protein_coding protein_coding MGP_BALBcJ_T0054162.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 30002944 30020055 + Sh2d3c protein_coding processed_transcript MGP_BALBcJ_T0054163.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 30002944 30030730 + MGP_BALBcJ_P0054163 Sh2d3c protein_coding protein_coding MGP_BALBcJ_T0054166.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 30010519 30016532 + Sh2d3c protein_coding processed_transcript MGP_BALBcJ_T0054167.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 30016700 30022275 + Sh2d3c protein_coding processed_transcript MGP_BALBcJ_T0054168.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 30016702 30018887 + Sh2d3c protein_coding processed_transcript MGP_BALBcJ_T0054169.1 MGP_BALBcJ_G0025593.1 mouse_genomes_project 2 30016797 30030222 + MGP_BALBcJ_P0054169 Sh2d3c protein_coding unknown_likely_coding MGP_BALBcJ_T0001034.1 MGP_BALBcJ_G0000962.1 mouse_genomes_project 2 10190903 10193163 - TEC TEC MGP_BALBcJ_T0003927.1 MGP_BALBcJ_G0003506.1 mouse_genomes_project 2 28039836 28043658 + 4930527E20Rik antisense antisense MGP_BALBcJ_T0056370.1 MGP_BALBcJ_G0026171.1 mouse_genomes_project 2 100987375 101006409 + MGP_BALBcJ_P0056370 Apip protein_coding protein_coding MGP_BALBcJ_T0056371.1 MGP_BALBcJ_G0026171.1 mouse_genomes_project 2 100987395 101006396 + Apip protein_coding processed_transcript MGP_BALBcJ_T0056372.1 MGP_BALBcJ_G0026171.1 mouse_genomes_project 2 100996665 101005554 + Apip protein_coding processed_transcript MGP_BALBcJ_T0056373.1 MGP_BALBcJ_G0026171.1 mouse_genomes_project 2 101005599 101006403 + Apip protein_coding processed_transcript MGP_BALBcJ_T0010347.1 MGP_BALBcJ_G0008472.1 mouse_genomes_project 2 7518146 7518240 + Mir466n miRNA miRNA MGP_BALBcJ_T0056480.1 MGP_BALBcJ_G0026194.1 mouse_genomes_project 2 102812284 102900735 + MGP_BALBcJ_P0056480 Ccdc73 protein_coding protein_coding MGP_BALBcJ_T0056481.1 MGP_BALBcJ_G0026194.1 mouse_genomes_project 2 102834819 102946982 + MGP_BALBcJ_P0056481 Ccdc73 protein_coding protein_coding MGP_BALBcJ_T0056482.1 MGP_BALBcJ_G0026194.1 mouse_genomes_project 2 102857431 102937245 + MGP_BALBcJ_P0056482 Ccdc73 protein_coding protein_coding MGP_BALBcJ_T0056483.1 MGP_BALBcJ_G0026194.1 mouse_genomes_project 2 102939401 102965662 + MGP_BALBcJ_P0056483 Ccdc73 protein_coding protein_coding MGP_BALBcJ_T0056488.1 MGP_BALBcJ_G0026194.1 mouse_genomes_project 2 102964938 102965715 + Ccdc73 protein_coding processed_transcript MGP_BALBcJ_T0059608.1 MGP_BALBcJ_G0026953.1 mouse_genomes_project 2 177704822 177721305 + MGP_BALBcJ_P0059608 Fam217b protein_coding protein_coding MGP_BALBcJ_T0059609.1 MGP_BALBcJ_G0026953.1 mouse_genomes_project 2 177704880 177710575 + Fam217b protein_coding processed_transcript MGP_BALBcJ_T0010330.1 MGP_BALBcJ_G0008455.1 mouse_genomes_project 2 7508797 7509167 + miRNA miRNA MGP_BALBcJ_T0054558.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36326877 36386185 - MGP_BALBcJ_P0054558 Golga1 protein_coding protein_coding MGP_BALBcJ_T0054559.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36326983 36386132 - MGP_BALBcJ_P0054559 Golga1 protein_coding protein_coding MGP_BALBcJ_T0054560.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36327225 36373654 - MGP_BALBcJ_P0054560 Golga1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054561.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36327501 36329129 - Golga1 protein_coding processed_transcript MGP_BALBcJ_T0054562.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36328375 36329289 - Golga1 protein_coding retained_intron MGP_BALBcJ_T0054563.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36328375 36386132 - MGP_BALBcJ_P0054563 Golga1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054564.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36328535 36330284 - MGP_BALBcJ_P0054564 Golga1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0054565.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36328876 36329964 - Golga1 protein_coding retained_intron MGP_BALBcJ_T0054566.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36333434 36386132 - Golga1 protein_coding retained_intron MGP_BALBcJ_T0054567.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36357340 36376763 - MGP_BALBcJ_P0054567 Golga1 protein_coding protein_coding MGP_BALBcJ_T0054568.1 MGP_BALBcJ_G0025682.1 mouse_genomes_project 2 36364103 36386129 - Golga1 protein_coding retained_intron MGP_BALBcJ_T0052848.1 MGP_BALBcJ_G0025375.1 mouse_genomes_project 2 21117434 21147407 - MGP_BALBcJ_P0052848 Tbpl2 protein_coding protein_coding MGP_BALBcJ_T0052849.1 MGP_BALBcJ_G0025375.1 mouse_genomes_project 2 21117628 21147344 - MGP_BALBcJ_P0052849 Tbpl2 protein_coding protein_coding MGP_BALBcJ_T0058461.1 MGP_BALBcJ_G0026695.1 mouse_genomes_project 2 153285846 153304806 - MGP_BALBcJ_P0058461 Pxmp4 protein_coding protein_coding MGP_BALBcJ_T0058462.1 MGP_BALBcJ_G0026695.1 mouse_genomes_project 2 153295354 153304786 - MGP_BALBcJ_P0058462 Pxmp4 protein_coding protein_coding MGP_BALBcJ_T0013406.1 MGP_BALBcJ_G0011503.1 mouse_genomes_project 2 9481850 9482250 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010327.1 MGP_BALBcJ_G0008452.1 mouse_genomes_project 2 7495065 7495164 + Mir466f-3 miRNA miRNA MGP_BALBcJ_T0057866.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133245703 133939440 + MGP_BALBcJ_P0057866 Plcb1 protein_coding protein_coding MGP_BALBcJ_T0057867.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133245795 133939451 + MGP_BALBcJ_P0057867 Plcb1 protein_coding protein_coding MGP_BALBcJ_T0057868.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133245811 133450973 + Plcb1 protein_coding retained_intron MGP_BALBcJ_T0057869.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133245865 133712191 + Plcb1 protein_coding retained_intron MGP_BALBcJ_T0057870.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133246166 133865811 + MGP_BALBcJ_P0057870 Plcb1 protein_coding protein_coding MGP_BALBcJ_T0057871.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133679989 133719786 + Plcb1 protein_coding processed_transcript MGP_BALBcJ_T0057872.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133680036 133719791 + MGP_BALBcJ_P0057872 Plcb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0057873.1 MGP_BALBcJ_G0026530.1 mouse_genomes_project 2 133706830 133713080 + Plcb1 protein_coding processed_transcript MGP_BALBcJ_T0013629.1 MGP_BALBcJ_G0011726.1 mouse_genomes_project 2 85269873 85270723 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0055535.1 MGP_BALBcJ_G0025861.1 mouse_genomes_project 2 78232015 78251568 + MGP_BALBcJ_P0055535 Nup35 protein_coding protein_coding MGP_BALBcJ_T0056279.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91813733 91817966 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056280.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91813733 91817997 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056281.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91813733 91844439 - MGP_BALBcJ_P0056281 Alkbh3 protein_coding protein_coding MGP_BALBcJ_T0056282.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91813812 91814810 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056283.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91813820 91844362 - MGP_BALBcJ_P0056283 Alkbh3 protein_coding protein_coding MGP_BALBcJ_T0056284.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91829322 91844063 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056285.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91829391 91838838 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056286.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91829391 91844386 - MGP_BALBcJ_P0056286 Alkbh3 protein_coding protein_coding MGP_BALBcJ_T0056287.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91839424 91844386 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056288.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91839894 91844384 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0056289.1 MGP_BALBcJ_G0026153.1 mouse_genomes_project 2 91841687 91844384 - Alkbh3 protein_coding processed_transcript MGP_BALBcJ_T0010427.1 MGP_BALBcJ_G0008552.1 mouse_genomes_project 2 103943532 103943657 + Gm22002 miRNA miRNA MGP_BALBcJ_T0101000.1 MGP_BALBcJ_G0039036.1 mouse_genomes_project 2 157178347 157178460 - Gm26003 snoRNA snoRNA MGP_BALBcJ_T0057393.1 MGP_BALBcJ_G0026418.1 mouse_genomes_project 2 124939750 124941148 - MGP_BALBcJ_P0057393 protein_coding protein_coding MGP_BALBcJ_T0010333.1 MGP_BALBcJ_G0008458.1 mouse_genomes_project 2 7511193 7511266 + Mir466 miRNA miRNA MGP_BALBcJ_T0001022.1 MGP_BALBcJ_G0000950.1 mouse_genomes_project 2 8345076 8345965 + TEC TEC MGP_BALBcJ_T0013704.1 MGP_BALBcJ_G0011801.1 mouse_genomes_project 2 113043370 113044272 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003923.1 MGP_BALBcJ_G0003503.1 mouse_genomes_project 2 27073544 27075139 - 2600006K01Rik antisense antisense MGP_BALBcJ_T0007187.1 MGP_BALBcJ_G0005890.1 mouse_genomes_project 2 52872658 52877005 - Gm26794 lincRNA lincRNA MGP_BALBcJ_T0102434.1 MGP_BALBcJ_G0040250.1 mouse_genomes_project 2 107400259 107423292 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0058901.1 MGP_BALBcJ_G0026773.1 mouse_genomes_project 2 157451252 157466530 + Actr5 protein_coding retained_intron MGP_BALBcJ_T0058902.1 MGP_BALBcJ_G0026773.1 mouse_genomes_project 2 157451252 157455522 + Actr5 protein_coding retained_intron MGP_BALBcJ_T0058903.1 MGP_BALBcJ_G0026773.1 mouse_genomes_project 2 157451252 157466530 + MGP_BALBcJ_P0058903 Actr5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0058904.1 MGP_BALBcJ_G0026773.1 mouse_genomes_project 2 157451252 157466543 + MGP_BALBcJ_P0058904 Actr5 protein_coding protein_coding MGP_BALBcJ_T0058905.1 MGP_BALBcJ_G0026773.1 mouse_genomes_project 2 157457993 157464029 + Actr5 protein_coding processed_transcript MGP_BALBcJ_T0017879.1 MGP_BALBcJ_G0015431.1 mouse_genomes_project 2 166515426 166575067 + Gm11476 processed_transcript processed_transcript MGP_BALBcJ_T0011475.1 MGP_BALBcJ_G0009600.1 mouse_genomes_project 2 42447901 42447962 + Gm27676 misc_RNA misc_RNA MGP_BALBcJ_T0057060.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 118902865 119013907 - MGP_BALBcJ_P0057060 Ubr1 protein_coding protein_coding MGP_BALBcJ_T0057061.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 118905170 118914147 - Ubr1 protein_coding processed_transcript MGP_BALBcJ_T0057062.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 118915670 118932697 - Ubr1 protein_coding processed_transcript MGP_BALBcJ_T0057063.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 118944441 118957158 - Ubr1 protein_coding processed_transcript MGP_BALBcJ_T0057064.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 118963737 118972671 - Ubr1 protein_coding processed_transcript MGP_BALBcJ_T0057065.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 118987678 119013805 - Ubr1 protein_coding retained_intron MGP_BALBcJ_T0057066.1 MGP_BALBcJ_G0026349.1 mouse_genomes_project 2 119005344 119013884 - Ubr1 protein_coding retained_intron MGP_BALBcJ_T0052729.1 MGP_BALBcJ_G0025353.1 mouse_genomes_project 2 16284938 16400450 + MGP_BALBcJ_P0052729 Armc3 protein_coding protein_coding MGP_BALBcJ_T0052730.1 MGP_BALBcJ_G0025353.1 mouse_genomes_project 2 16284938 16400450 + MGP_BALBcJ_P0052730 Armc3 protein_coding protein_coding MGP_BALBcJ_T0053388.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059003 24060382 - Surf1 protein_coding retained_intron MGP_BALBcJ_T0053389.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059005 24062091 - MGP_BALBcJ_P0053389 Surf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053390.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059005 24061923 - MGP_BALBcJ_P0053390 Surf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053391.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059005 24062153 - MGP_BALBcJ_P0053391 Surf1 protein_coding protein_coding MGP_BALBcJ_T0053392.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059199 24061943 - MGP_BALBcJ_P0053392 Surf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053393.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059199 24061968 - MGP_BALBcJ_P0053393 Surf1 protein_coding protein_coding MGP_BALBcJ_T0053394.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24059853 24061934 - Surf1 protein_coding retained_intron MGP_BALBcJ_T0053395.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24060097 24061115 - Surf1 protein_coding retained_intron MGP_BALBcJ_T0053396.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24060480 24061955 - MGP_BALBcJ_P0053396 Surf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053397.1 MGP_BALBcJ_G0025473.1 mouse_genomes_project 2 24061079 24061968 - MGP_BALBcJ_P0053397 Surf1 protein_coding protein_coding MGP_BALBcJ_T0055306.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71185531 71234405 - MGP_BALBcJ_P0055306 Chn1 protein_coding protein_coding MGP_BALBcJ_T0055307.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71185539 71348477 - MGP_BALBcJ_P0055307 Chn1 protein_coding protein_coding MGP_BALBcJ_T0055308.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71185539 71348477 - MGP_BALBcJ_P0055308 Chn1 protein_coding protein_coding MGP_BALBcJ_T0055309.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71187963 71291315 - MGP_BALBcJ_P0055309 Chn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055310.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71199313 71229532 - MGP_BALBcJ_P0055310 Chn1 protein_coding protein_coding MGP_BALBcJ_T0055311.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71200031 71348457 - MGP_BALBcJ_P0055311 Chn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0055312.1 MGP_BALBcJ_G0025812.1 mouse_genomes_project 2 71252296 71348172 - MGP_BALBcJ_P0055312 Chn1 protein_coding protein_coding MGP_BALBcJ_T0007267.1 MGP_BALBcJ_G0005956.1 mouse_genomes_project 2 106121600 106225616 - Gm13912 lincRNA lincRNA MGP_BALBcJ_T0007390.1 MGP_BALBcJ_G0006057.1 mouse_genomes_project 2 168432894 168439751 - 4930529I22Rik lincRNA lincRNA MGP_BALBcJ_T0017692.1 MGP_BALBcJ_G0015332.1 mouse_genomes_project 2 10348414 10404326 + Gm13270 processed_transcript antisense MGP_BALBcJ_T0017693.1 MGP_BALBcJ_G0015332.1 mouse_genomes_project 2 10348415 10351369 + Gm13270 processed_transcript retained_intron MGP_BALBcJ_T0007297.1 MGP_BALBcJ_G0005979.1 mouse_genomes_project 2 122944142 122946571 + Gm13994 lincRNA lincRNA MGP_BALBcJ_T0055743.1 MGP_BALBcJ_G0025956.1 mouse_genomes_project 2 84467465 84468458 + MGP_BALBcJ_P0055743 Olfr1094 protein_coding protein_coding MGP_BALBcJ_T0057785.1 MGP_BALBcJ_G0026509.1 mouse_genomes_project 2 130298144 130304918 - MGP_BALBcJ_P0057785 Erv3 protein_coding protein_coding MGP_BALBcJ_T0100979.1 MGP_BALBcJ_G0039015.1 mouse_genomes_project 2 128671752 128671820 + Snord110 snoRNA snoRNA MGP_BALBcJ_T0056114.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89478289 89499813 - MGP_BALBcJ_P0056114 Atg13 protein_coding unknown_likely_coding MGP_BALBcJ_T0056115.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89478292 89514356 - MGP_BALBcJ_P0056115 Atg13 protein_coding protein_coding MGP_BALBcJ_T0056116.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89478293 89514299 - MGP_BALBcJ_P0056116 Atg13 protein_coding protein_coding MGP_BALBcJ_T0056117.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89479957 89483337 - Atg13 protein_coding processed_transcript MGP_BALBcJ_T0056118.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89479992 89485838 - Atg13 protein_coding processed_transcript MGP_BALBcJ_T0056119.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89483079 89488861 - Atg13 protein_coding processed_transcript MGP_BALBcJ_T0056120.1 MGP_BALBcJ_G0026125.1 mouse_genomes_project 2 89492280 89509541 - Atg13 protein_coding processed_transcript MGP_BALBcJ_T0053563.1 MGP_BALBcJ_G0025508.1 mouse_genomes_project 2 26106056 26235757 - MGP_BALBcJ_P0053563 Cfap77 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053564.1 MGP_BALBcJ_G0025508.1 mouse_genomes_project 2 26106060 26235772 - MGP_BALBcJ_P0053564 Cfap77 protein_coding protein_coding MGP_BALBcJ_T0053565.1 MGP_BALBcJ_G0025508.1 mouse_genomes_project 2 26106933 26220231 - Cfap77 protein_coding processed_transcript MGP_BALBcJ_T0053566.1 MGP_BALBcJ_G0025508.1 mouse_genomes_project 2 26133659 26235799 - MGP_BALBcJ_P0053566 Cfap77 protein_coding protein_coding MGP_BALBcJ_T0053567.1 MGP_BALBcJ_G0025508.1 mouse_genomes_project 2 26232629 26235792 - Cfap77 protein_coding processed_transcript MGP_BALBcJ_T0055047.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65670626 65937996 - MGP_BALBcJ_P0055047 Stk39 protein_coding protein_coding MGP_BALBcJ_T0055048.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65670629 65829679 - Stk39 protein_coding retained_intron MGP_BALBcJ_T0055049.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65671921 65683957 - Stk39 protein_coding processed_transcript MGP_BALBcJ_T0055050.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65671921 65712257 - Stk39 protein_coding processed_transcript MGP_BALBcJ_T0055051.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65671921 65712262 - Stk39 protein_coding processed_transcript MGP_BALBcJ_T0055052.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65671928 65712235 - Stk39 protein_coding processed_transcript MGP_BALBcJ_T0055053.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65724134 65937668 - Stk39 protein_coding retained_intron MGP_BALBcJ_T0055054.1 MGP_BALBcJ_G0025762.1 mouse_genomes_project 2 65821181 65850804 - Stk39 protein_coding processed_transcript MGP_BALBcJ_T0007239.1 MGP_BALBcJ_G0005935.1 mouse_genomes_project 2 90351784 90363102 - Gm13817 lincRNA lincRNA MGP_BALBcJ_T0007246.1 MGP_BALBcJ_G0005939.1 mouse_genomes_project 2 92089292 92105337 - lincRNA lincRNA MGP_BALBcJ_T0007247.1 MGP_BALBcJ_G0005939.1 mouse_genomes_project 2 92098356 92105356 - lincRNA lincRNA MGP_BALBcJ_T0053842.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044054 28059987 + MGP_BALBcJ_P0053842 Ntmt1 protein_coding protein_coding MGP_BALBcJ_T0053843.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044169 28059971 + MGP_BALBcJ_P0053843 Ntmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053844.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044170 28059339 + MGP_BALBcJ_P0053844 Ntmt1 protein_coding protein_coding MGP_BALBcJ_T0053845.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044185 28052588 + Ntmt1 protein_coding processed_transcript MGP_BALBcJ_T0053846.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044222 28053052 + Ntmt1 protein_coding processed_transcript MGP_BALBcJ_T0053847.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044341 28059506 + MGP_BALBcJ_P0053847 Ntmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0053848.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28044418 28056922 + MGP_BALBcJ_P0053848 Ntmt1 protein_coding protein_coding MGP_BALBcJ_T0053849.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28054369 28057042 + MGP_BALBcJ_P0053849 Ntmt1 protein_coding protein_coding MGP_BALBcJ_T0053850.1 MGP_BALBcJ_G0025547.1 mouse_genomes_project 2 28056075 28059513 + MGP_BALBcJ_P0053850 Ntmt1 protein_coding protein_coding MGP_BALBcJ_T0053369.1 MGP_BALBcJ_G0025469.1 mouse_genomes_project 2 23983670 23998028 - MGP_BALBcJ_P0053369 Abo protein_coding protein_coding MGP_BALBcJ_T0053370.1 MGP_BALBcJ_G0025469.1 mouse_genomes_project 2 23983670 24006405 - MGP_BALBcJ_P0053370 Abo protein_coding protein_coding MGP_BALBcJ_T0099702.1 MGP_BALBcJ_G0037738.1 mouse_genomes_project 2 132061735 132061842 - Gm25258 snRNA snRNA MGP_BALBcJ_T0053296.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23508788 23515303 - MGP_BALBcJ_P0053296 Sdccag3 protein_coding protein_coding MGP_BALBcJ_T0053297.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23508788 23515278 - MGP_BALBcJ_P0053297 Sdccag3 protein_coding protein_coding MGP_BALBcJ_T0053298.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23508788 23515284 - MGP_BALBcJ_P0053298 Sdccag3 protein_coding protein_coding MGP_BALBcJ_T0053299.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23508788 23515291 - MGP_BALBcJ_P0053299 Sdccag3 protein_coding protein_coding MGP_BALBcJ_T0053300.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23508789 23513568 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053301.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23509541 23511200 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053302.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23509550 23511596 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053303.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23512641 23515293 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053304.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23512641 23515270 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053305.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23512999 23515282 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053306.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23513091 23514681 - MGP_BALBcJ_P0053306 Sdccag3 protein_coding protein_coding MGP_BALBcJ_T0053307.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23513112 23515254 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0053308.1 MGP_BALBcJ_G0025459.1 mouse_genomes_project 2 23513542 23515152 - Sdccag3 protein_coding processed_transcript MGP_BALBcJ_T0016404.1 MGP_BALBcJ_G0014501.1 mouse_genomes_project X 72808199 72808968 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016508.1 MGP_BALBcJ_G0014605.1 mouse_genomes_project X 94329424 94330426 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097604.1 MGP_BALBcJ_G0036106.1 mouse_genomes_project X 136154561 136186394 + MGP_BALBcJ_P0097604 Vsig1 protein_coding protein_coding MGP_BALBcJ_T0097605.1 MGP_BALBcJ_G0036106.1 mouse_genomes_project X 136170142 136185155 + Vsig1 protein_coding processed_transcript MGP_BALBcJ_T0016206.1 MGP_BALBcJ_G0014303.1 mouse_genomes_project X 15192949 15193145 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009366.1 MGP_BALBcJ_G0007516.1 mouse_genomes_project X 63622695 63633610 - Fmr1os lincRNA lincRNA MGP_BALBcJ_T0101540.1 MGP_BALBcJ_G0039576.1 mouse_genomes_project X 99452643 99452781 - Gm22266 snoRNA snoRNA MGP_BALBcJ_T0102858.1 MGP_BALBcJ_G0040673.1 mouse_genomes_project X 52618696 52618840 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016337.1 MGP_BALBcJ_G0014434.1 mouse_genomes_project X 57574561 57575043 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016251.1 MGP_BALBcJ_G0014348.1 mouse_genomes_project X 37055730 37055898 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096941.1 MGP_BALBcJ_G0035901.1 mouse_genomes_project X 94184787 94193825 + MGP_BALBcJ_P0096941 Yipf6 protein_coding protein_coding MGP_BALBcJ_T0096942.1 MGP_BALBcJ_G0035901.1 mouse_genomes_project X 94185760 94192329 + MGP_BALBcJ_P0096942 Yipf6 protein_coding protein_coding MGP_BALBcJ_T0096943.1 MGP_BALBcJ_G0035901.1 mouse_genomes_project X 94185788 94188369 + MGP_BALBcJ_P0096943 Yipf6 protein_coding protein_coding MGP_BALBcJ_T0096944.1 MGP_BALBcJ_G0035901.1 mouse_genomes_project X 94186248 94193600 + Yipf6 protein_coding retained_intron MGP_BALBcJ_T0096945.1 MGP_BALBcJ_G0035901.1 mouse_genomes_project X 94186248 94197716 + MGP_BALBcJ_P0096945 Yipf6 protein_coding protein_coding MGP_BALBcJ_T0096946.1 MGP_BALBcJ_G0035901.1 mouse_genomes_project X 94186694 94192729 + Yipf6 protein_coding retained_intron MGP_BALBcJ_T0018629.1 MGP_BALBcJ_G0015726.1 mouse_genomes_project X 128920486 128922989 - 4930570D08Rik processed_transcript processed_transcript MGP_BALBcJ_T0016209.1 MGP_BALBcJ_G0014306.1 mouse_genomes_project X 15663611 15663810 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016245.1 MGP_BALBcJ_G0014342.1 mouse_genomes_project X 36093044 36093300 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095819.1 MGP_BALBcJ_G0035580.1 mouse_genomes_project X 16502637 16504295 - MGP_BALBcJ_P0095819 Gm28269 protein_coding protein_coding MGP_BALBcJ_T0009401.1 MGP_BALBcJ_G0007537.1 mouse_genomes_project X 128710365 128729574 + Gm26851 lincRNA lincRNA MGP_BALBcJ_T0016243.1 MGP_BALBcJ_G0014340.1 mouse_genomes_project X 35433280 35433559 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097399.1 MGP_BALBcJ_G0036043.1 mouse_genomes_project X 129572282 129586457 - MGP_BALBcJ_P0097399 protein_coding protein_coding MGP_BALBcJ_T0095646.1 MGP_BALBcJ_G0035529.1 mouse_genomes_project X 4616530 4617083 + MGP_BALBcJ_P0095646 4930557A04Rik protein_coding protein_coding MGP_BALBcJ_T0016365.1 MGP_BALBcJ_G0014462.1 mouse_genomes_project X 63886492 63887348 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101532.1 MGP_BALBcJ_G0039568.1 mouse_genomes_project X 71945354 71945493 + Gm23280 snoRNA snoRNA MGP_BALBcJ_T0096442.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68895464 68915364 - MGP_BALBcJ_P0096442 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096447.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898374 68915358 - MGP_BALBcJ_P0096447 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096448.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898380 68915324 - MGP_BALBcJ_P0096448 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096449.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - Arhgap4 protein_coding retained_intron MGP_BALBcJ_T0096450.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - Arhgap4 protein_coding retained_intron MGP_BALBcJ_T0096451.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - Arhgap4 protein_coding retained_intron MGP_BALBcJ_T0096452.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - Arhgap4 protein_coding retained_intron MGP_BALBcJ_T0096453.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - Arhgap4 protein_coding retained_intron MGP_BALBcJ_T0096454.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - MGP_BALBcJ_P0096454 Arhgap4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096455.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898554 68915299 - MGP_BALBcJ_P0096455 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096456.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898560 68915299 - MGP_BALBcJ_P0096456 Arhgap4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096457.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68898698 68915257 - MGP_BALBcJ_P0096457 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096458.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68900433 68901449 - Arhgap4 protein_coding processed_transcript MGP_BALBcJ_T0096459.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68900836 68902089 - MGP_BALBcJ_P0096459 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096460.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68900893 68903649 - MGP_BALBcJ_P0096460 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096461.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68903335 68925836 - Arhgap4 protein_coding retained_intron MGP_BALBcJ_T0096462.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68903339 68904761 - Arhgap4 protein_coding processed_transcript MGP_BALBcJ_T0096463.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68904131 68909686 - MGP_BALBcJ_P0096463 Arhgap4 protein_coding protein_coding MGP_BALBcJ_T0096464.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68910414 68915326 - Arhgap4 protein_coding processed_transcript MGP_BALBcJ_T0096465.1 MGP_BALBcJ_G0035790.1 mouse_genomes_project X 68910807 68915321 - MGP_BALBcJ_P0096465 Arhgap4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096015.1 MGP_BALBcJ_G0035652.1 mouse_genomes_project X 41049774 41051113 + MGP_BALBcJ_P0096015 Actrt1 protein_coding protein_coding MGP_BALBcJ_T0095647.1 MGP_BALBcJ_G0035530.1 mouse_genomes_project X 4653307 4753499 + MGP_BALBcJ_P0095647 Sytl5 protein_coding protein_coding MGP_BALBcJ_T0095648.1 MGP_BALBcJ_G0035530.1 mouse_genomes_project X 4653307 4753499 + MGP_BALBcJ_P0095648 Sytl5 protein_coding protein_coding MGP_BALBcJ_T0101520.1 MGP_BALBcJ_G0039556.1 mouse_genomes_project X 52361515 52361586 - Snord61 snoRNA snoRNA MGP_BALBcJ_T0097674.1 MGP_BALBcJ_G0036129.1 mouse_genomes_project X 140374275 140434464 - MGP_BALBcJ_P0097674 Lhfpl1 protein_coding protein_coding MGP_BALBcJ_T0097675.1 MGP_BALBcJ_G0036129.1 mouse_genomes_project X 140426522 140434603 - MGP_BALBcJ_P0097675 Lhfpl1 protein_coding protein_coding MGP_BALBcJ_T0096329.1 MGP_BALBcJ_G0035757.1 mouse_genomes_project X 66881869 66899074 + MGP_BALBcJ_P0096329 Gm1141 protein_coding protein_coding MGP_BALBcJ_T0096330.1 MGP_BALBcJ_G0035757.1 mouse_genomes_project X 66887548 66895122 + MGP_BALBcJ_P0096330 Gm1141 protein_coding protein_coding MGP_BALBcJ_T0016291.1 MGP_BALBcJ_G0014388.1 mouse_genomes_project X 47943057 47943691 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016694.1 MGP_BALBcJ_G0014791.1 mouse_genomes_project X 132099397 132099855 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016248.1 MGP_BALBcJ_G0014345.1 mouse_genomes_project X 36630696 36631362 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016632.1 MGP_BALBcJ_G0014729.1 mouse_genomes_project X 112911936 112913695 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098071.1 MGP_BALBcJ_G0036220.1 mouse_genomes_project X 159702489 159725175 + MGP_BALBcJ_P0098071 Asb11 protein_coding protein_coding MGP_BALBcJ_T0098072.1 MGP_BALBcJ_G0036220.1 mouse_genomes_project X 159702505 159712493 + Asb11 protein_coding retained_intron MGP_BALBcJ_T0098073.1 MGP_BALBcJ_G0036220.1 mouse_genomes_project X 159703553 159725169 + MGP_BALBcJ_P0098073 Asb11 protein_coding protein_coding MGP_BALBcJ_T0011755.1 MGP_BALBcJ_G0009880.1 mouse_genomes_project X 128399654 128399990 - Gm22552 misc_RNA misc_RNA MGP_BALBcJ_T0016853.1 MGP_BALBcJ_G0014950.1 mouse_genomes_project X 161756097 161756923 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016573.1 MGP_BALBcJ_G0014670.1 mouse_genomes_project X 102245003 102245295 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016179.1 MGP_BALBcJ_G0014276.1 mouse_genomes_project X 8178028 8178841 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101563.1 MGP_BALBcJ_G0039599.1 mouse_genomes_project X 152691817 152691953 + Gm24281 snoRNA snoRNA MGP_BALBcJ_T0016175.1 MGP_BALBcJ_G0014272.1 mouse_genomes_project X 7725956 7726313 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097150.1 MGP_BALBcJ_G0035960.1 mouse_genomes_project X 99460150 99578537 - MGP_BALBcJ_P0097150 C77370 protein_coding protein_coding MGP_BALBcJ_T0097151.1 MGP_BALBcJ_G0035960.1 mouse_genomes_project X 99460151 99578469 - MGP_BALBcJ_P0097151 C77370 protein_coding protein_coding MGP_BALBcJ_T0097152.1 MGP_BALBcJ_G0035960.1 mouse_genomes_project X 99466752 99578496 - MGP_BALBcJ_P0097152 C77370 protein_coding protein_coding MGP_BALBcJ_T0097768.1 MGP_BALBcJ_G0036144.1 mouse_genomes_project X 146488392 146615324 + Fam120c protein_coding retained_intron MGP_BALBcJ_T0097769.1 MGP_BALBcJ_G0036144.1 mouse_genomes_project X 146488392 146615324 + MGP_BALBcJ_P0097769 Fam120c protein_coding protein_coding MGP_BALBcJ_T0097918.1 MGP_BALBcJ_G0036185.1 mouse_genomes_project X 153083402 153307242 - MGP_BALBcJ_P0097918 Cnksr2 protein_coding protein_coding MGP_BALBcJ_T0097919.1 MGP_BALBcJ_G0036185.1 mouse_genomes_project X 153094707 153307242 - MGP_BALBcJ_P0097919 Cnksr2 protein_coding protein_coding MGP_BALBcJ_T0097920.1 MGP_BALBcJ_G0036185.1 mouse_genomes_project X 153122933 153130918 - Cnksr2 protein_coding retained_intron MGP_BALBcJ_T0016637.1 MGP_BALBcJ_G0014734.1 mouse_genomes_project X 114919085 114920374 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016546.1 MGP_BALBcJ_G0014643.1 mouse_genomes_project X 98982146 98982712 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100270.1 MGP_BALBcJ_G0038306.1 mouse_genomes_project X 94062560 94062667 + Gm26000 snRNA snRNA MGP_BALBcJ_T0096628.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69377367 69380323 - MGP_BALBcJ_P0096628 Ubl4a protein_coding protein_coding MGP_BALBcJ_T0096629.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69377368 69380208 - Ubl4a protein_coding processed_transcript MGP_BALBcJ_T0096630.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69378921 69380116 - MGP_BALBcJ_P0096630 Ubl4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096631.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69378959 69380146 - Ubl4a protein_coding retained_intron MGP_BALBcJ_T0096632.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69379114 69384866 - MGP_BALBcJ_P0096632 Ubl4a protein_coding protein_coding MGP_BALBcJ_T0096633.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69379392 69380163 - Ubl4a protein_coding retained_intron MGP_BALBcJ_T0096634.1 MGP_BALBcJ_G0035810.1 mouse_genomes_project X 69379446 69380153 - Ubl4a protein_coding processed_transcript MGP_BALBcJ_T0016638.1 MGP_BALBcJ_G0014735.1 mouse_genomes_project X 115053221 115054051 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095637.1 MGP_BALBcJ_G0035526.1 mouse_genomes_project X 4189692 4225328 - MGP_BALBcJ_P0095637 Cybb protein_coding protein_coding MGP_BALBcJ_T0095638.1 MGP_BALBcJ_G0035526.1 mouse_genomes_project X 4202933 4225273 - MGP_BALBcJ_P0095638 Cybb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095639.1 MGP_BALBcJ_G0035526.1 mouse_genomes_project X 4205389 4207542 - Cybb protein_coding retained_intron MGP_BALBcJ_T0095640.1 MGP_BALBcJ_G0035526.1 mouse_genomes_project X 4213026 4246630 - MGP_BALBcJ_P0095640 Cybb protein_coding protein_coding MGP_BALBcJ_T0095641.1 MGP_BALBcJ_G0035526.1 mouse_genomes_project X 4220991 4225274 - Cybb protein_coding retained_intron MGP_BALBcJ_T0016479.1 MGP_BALBcJ_G0014576.1 mouse_genomes_project X 89529420 89530321 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016194.1 MGP_BALBcJ_G0014291.1 mouse_genomes_project X 12677302 12678122 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095538.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2452964 2453609 + Otud5 protein_coding processed_transcript MGP_BALBcJ_T0095539.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2453431 2488603 + MGP_BALBcJ_P0095539 Otud5 protein_coding protein_coding MGP_BALBcJ_T0095540.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2453456 2486837 + MGP_BALBcJ_P0095540 Otud5 protein_coding protein_coding MGP_BALBcJ_T0095541.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2453656 2487262 + MGP_BALBcJ_P0095541 Otud5 protein_coding protein_coding MGP_BALBcJ_T0095542.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2453682 2487267 + MGP_BALBcJ_P0095542 Otud5 protein_coding protein_coding MGP_BALBcJ_T0095543.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2453716 2488597 + MGP_BALBcJ_P0095543 Otud5 protein_coding protein_coding MGP_BALBcJ_T0095544.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2454205 2487261 + Otud5 protein_coding retained_intron MGP_BALBcJ_T0095545.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2454206 2479942 + Otud5 protein_coding retained_intron MGP_BALBcJ_T0095546.1 MGP_BALBcJ_G0035500.1 mouse_genomes_project X 2467302 2479542 + Otud5 protein_coding retained_intron MGP_BALBcJ_T0011109.1 MGP_BALBcJ_G0009234.1 mouse_genomes_project X 34716041 34716112 - Gm26194 miRNA miRNA MGP_BALBcJ_T0097222.1 MGP_BALBcJ_G0035981.1 mouse_genomes_project X 102508263 102524745 + MGP_BALBcJ_P0097222 P2ry10 protein_coding protein_coding MGP_BALBcJ_T0097223.1 MGP_BALBcJ_G0035981.1 mouse_genomes_project X 102509005 102524749 + MGP_BALBcJ_P0097223 P2ry10 protein_coding protein_coding MGP_BALBcJ_T0097224.1 MGP_BALBcJ_G0035981.1 mouse_genomes_project X 102509049 102524749 + MGP_BALBcJ_P0097224 P2ry10 protein_coding protein_coding MGP_BALBcJ_T0016710.1 MGP_BALBcJ_G0014807.1 mouse_genomes_project X 134592147 134592856 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095753.1 MGP_BALBcJ_G0035562.1 mouse_genomes_project X 15339722 15342016 - MGP_BALBcJ_P0095753 Ndufb11 protein_coding protein_coding MGP_BALBcJ_T0011175.1 MGP_BALBcJ_G0009300.1 mouse_genomes_project X 99459687 99459778 + Gm24993 miRNA miRNA MGP_BALBcJ_T0016200.1 MGP_BALBcJ_G0014297.1 mouse_genomes_project X 14475547 14475880 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101516.1 MGP_BALBcJ_G0039552.1 mouse_genomes_project X 31507851 31507938 + Gm23613 snoRNA snoRNA MGP_BALBcJ_T0097336.1 MGP_BALBcJ_G0036023.1 mouse_genomes_project X 122005697 122030090 + MGP_BALBcJ_P0097336 Gm382 protein_coding protein_coding MGP_BALBcJ_T0096747.1 MGP_BALBcJ_G0035838.1 mouse_genomes_project X 72899730 72915717 - MGP_BALBcJ_P0096747 Pbsn protein_coding protein_coding MGP_BALBcJ_T0096748.1 MGP_BALBcJ_G0035838.1 mouse_genomes_project X 72899731 72915624 - MGP_BALBcJ_P0096748 Pbsn protein_coding protein_coding MGP_BALBcJ_T0016460.1 MGP_BALBcJ_G0014557.1 mouse_genomes_project X 86368029 86369053 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016553.1 MGP_BALBcJ_G0014650.1 mouse_genomes_project X 99386716 99386988 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016691.1 MGP_BALBcJ_G0014788.1 mouse_genomes_project X 131510119 131510743 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096257.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63633751 63676191 + MGP_BALBcJ_P0096257 Fmr1 protein_coding protein_coding MGP_BALBcJ_T0096258.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63633792 63665117 + Fmr1 protein_coding retained_intron MGP_BALBcJ_T0096259.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63633792 63667101 + Fmr1 protein_coding retained_intron MGP_BALBcJ_T0096260.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63633792 63635315 + Fmr1 protein_coding processed_transcript MGP_BALBcJ_T0096261.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63633834 63676191 + MGP_BALBcJ_P0096261 Fmr1 protein_coding protein_coding MGP_BALBcJ_T0096262.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63634012 63676191 + MGP_BALBcJ_P0096262 Fmr1 protein_coding protein_coding MGP_BALBcJ_T0096263.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63634012 63676191 + MGP_BALBcJ_P0096263 Fmr1 protein_coding protein_coding MGP_BALBcJ_T0096264.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63634021 63676191 + MGP_BALBcJ_P0096264 Fmr1 protein_coding protein_coding MGP_BALBcJ_T0096265.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63634027 63676191 + MGP_BALBcJ_P0096265 Fmr1 protein_coding protein_coding MGP_BALBcJ_T0096266.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63653023 63664414 + Fmr1 protein_coding retained_intron MGP_BALBcJ_T0096267.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63655886 63656560 + Fmr1 protein_coding retained_intron MGP_BALBcJ_T0096268.1 MGP_BALBcJ_G0035742.1 mouse_genomes_project X 63670072 63671542 + Fmr1 protein_coding retained_intron MGP_BALBcJ_T0096987.1 MGP_BALBcJ_G0035914.1 mouse_genomes_project X 95870234 95873290 - Pdzd11 protein_coding retained_intron MGP_BALBcJ_T0096988.1 MGP_BALBcJ_G0035914.1 mouse_genomes_project X 95870237 95873920 - MGP_BALBcJ_P0096988 Pdzd11 protein_coding protein_coding MGP_BALBcJ_T0096989.1 MGP_BALBcJ_G0035914.1 mouse_genomes_project X 95870259 95873287 - MGP_BALBcJ_P0096989 Pdzd11 protein_coding protein_coding MGP_BALBcJ_T0096990.1 MGP_BALBcJ_G0035914.1 mouse_genomes_project X 95870728 95873623 - Pdzd11 protein_coding processed_transcript MGP_BALBcJ_T0018630.1 MGP_BALBcJ_G0015727.1 mouse_genomes_project X 129737691 129739592 - B230119M05Rik processed_transcript processed_transcript MGP_BALBcJ_T0095565.1 MGP_BALBcJ_G0035505.1 mouse_genomes_project X 2519703 2519846 - MGP_BALBcJ_P0095565 protein_coding protein_coding MGP_BALBcJ_T0016714.1 MGP_BALBcJ_G0014811.1 mouse_genomes_project X 135134365 135135847 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097859.1 MGP_BALBcJ_G0036165.1 mouse_genomes_project X 148869211 148880431 - MGP_BALBcJ_P0097859 Kctd12b protein_coding protein_coding MGP_BALBcJ_T0097860.1 MGP_BALBcJ_G0036165.1 mouse_genomes_project X 148869211 148880320 - MGP_BALBcJ_P0097860 Kctd12b protein_coding protein_coding MGP_BALBcJ_T0095990.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36862333 36990139 + MGP_BALBcJ_P0095990 Stag2 protein_coding protein_coding MGP_BALBcJ_T0095991.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36862416 36990129 + MGP_BALBcJ_P0095991 Stag2 protein_coding protein_coding MGP_BALBcJ_T0095992.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36862545 36925529 + Stag2 protein_coding retained_intron MGP_BALBcJ_T0095993.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36862687 36919087 + MGP_BALBcJ_P0095993 Stag2 protein_coding protein_coding MGP_BALBcJ_T0095994.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36863158 36924268 + Stag2 protein_coding processed_transcript MGP_BALBcJ_T0095995.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36863554 36990139 + MGP_BALBcJ_P0095995 Stag2 protein_coding protein_coding MGP_BALBcJ_T0095996.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36863867 36919090 + MGP_BALBcJ_P0095996 Stag2 protein_coding protein_coding MGP_BALBcJ_T0095997.1 MGP_BALBcJ_G0035644.1 mouse_genomes_project X 36865033 36933878 + MGP_BALBcJ_P0095997 Stag2 protein_coding protein_coding MGP_BALBcJ_T0009376.1 MGP_BALBcJ_G0007525.1 mouse_genomes_project X 94666122 94676013 - Gm14809 lincRNA lincRNA MGP_BALBcJ_T0016470.1 MGP_BALBcJ_G0014567.1 mouse_genomes_project X 87600981 87601157 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011139.1 MGP_BALBcJ_G0009264.1 mouse_genomes_project X 61832668 61832735 - Mir471 miRNA miRNA MGP_BALBcJ_T0016494.1 MGP_BALBcJ_G0014591.1 mouse_genomes_project X 90674400 90676514 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016446.1 MGP_BALBcJ_G0014543.1 mouse_genomes_project X 83578264 83579274 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016275.1 MGP_BALBcJ_G0014372.1 mouse_genomes_project X 43814127 43814527 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016188.1 MGP_BALBcJ_G0014285.1 mouse_genomes_project X 11144045 11144297 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095838.1 MGP_BALBcJ_G0035586.1 mouse_genomes_project X 30842244 30901635 + MGP_BALBcJ_P0095838 Il13ra1 protein_coding protein_coding MGP_BALBcJ_T0097328.1 MGP_BALBcJ_G0036019.1 mouse_genomes_project X 115280253 115280601 - MGP_BALBcJ_P0097328 Gm14920 protein_coding protein_coding MGP_BALBcJ_T0016801.1 MGP_BALBcJ_G0014898.1 mouse_genomes_project X 151933198 151933667 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016368.1 MGP_BALBcJ_G0014465.1 mouse_genomes_project X 65473735 65475574 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016272.1 MGP_BALBcJ_G0014369.1 mouse_genomes_project X 42965911 42966259 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016329.1 MGP_BALBcJ_G0014426.1 mouse_genomes_project X 56555455 56556033 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016828.1 MGP_BALBcJ_G0014925.1 mouse_genomes_project X 155605239 155611042 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101992.1 MGP_BALBcJ_G0039834.1 mouse_genomes_project X 130674622 130677359 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0016826.1 MGP_BALBcJ_G0014923.1 mouse_genomes_project X 155532769 155533275 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098778.1 MGP_BALBcJ_G0036832.1 mouse_genomes_project X 91442428 91442564 - Gm24718 scaRNA scaRNA MGP_BALBcJ_T0011203.1 MGP_BALBcJ_G0009328.1 mouse_genomes_project X 152448067 152448169 + Gm23798 miRNA miRNA MGP_BALBcJ_T0101993.1 MGP_BALBcJ_G0039835.1 mouse_genomes_project X 145963577 145995270 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101994.1 MGP_BALBcJ_G0039835.1 mouse_genomes_project X 145988295 145990519 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101995.1 MGP_BALBcJ_G0039835.1 mouse_genomes_project X 145991908 145995383 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0098045.1 MGP_BALBcJ_G0036212.1 mouse_genomes_project X 159225676 159278812 - MGP_BALBcJ_P0098045 Car5b protein_coding protein_coding MGP_BALBcJ_T0098046.1 MGP_BALBcJ_G0036212.1 mouse_genomes_project X 159263995 159278796 - Car5b protein_coding retained_intron MGP_BALBcJ_T0011164.1 MGP_BALBcJ_G0009289.1 mouse_genomes_project X 80497647 80497730 + Gm44378 miRNA miRNA MGP_BALBcJ_T0016274.1 MGP_BALBcJ_G0014371.1 mouse_genomes_project X 43804950 43805299 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097073.1 MGP_BALBcJ_G0035931.1 mouse_genomes_project X 96796818 96864861 + MGP_BALBcJ_P0097073 Taf1 protein_coding protein_coding MGP_BALBcJ_T0097074.1 MGP_BALBcJ_G0035931.1 mouse_genomes_project X 96796825 96865609 + MGP_BALBcJ_P0097074 Taf1 protein_coding protein_coding MGP_BALBcJ_T0097075.1 MGP_BALBcJ_G0035931.1 mouse_genomes_project X 96796843 96864861 + MGP_BALBcJ_P0097075 Taf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097076.1 MGP_BALBcJ_G0035931.1 mouse_genomes_project X 96796843 96813358 + MGP_BALBcJ_P0097076 Taf1 protein_coding protein_coding MGP_BALBcJ_T0097077.1 MGP_BALBcJ_G0035931.1 mouse_genomes_project X 96820468 96864861 + Taf1 protein_coding retained_intron MGP_BALBcJ_T0097078.1 MGP_BALBcJ_G0035931.1 mouse_genomes_project X 96854373 96864398 + Taf1 protein_coding processed_transcript MGP_BALBcJ_T0016449.1 MGP_BALBcJ_G0014546.1 mouse_genomes_project X 84010085 84010358 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097357.1 MGP_BALBcJ_G0036031.1 mouse_genomes_project X 128929380 128952620 + MGP_BALBcJ_P0097357 Srpx2 protein_coding protein_coding MGP_BALBcJ_T0095579.1 MGP_BALBcJ_G0035510.1 mouse_genomes_project X 2571547 2580148 - MGP_BALBcJ_P0095579 Gata1 protein_coding protein_coding MGP_BALBcJ_T0095580.1 MGP_BALBcJ_G0035510.1 mouse_genomes_project X 2574681 2591075 - MGP_BALBcJ_P0095580 Gata1 protein_coding protein_coding MGP_BALBcJ_T0095581.1 MGP_BALBcJ_G0035510.1 mouse_genomes_project X 2575270 2576408 - MGP_BALBcJ_P0095581 Gata1 protein_coding protein_coding MGP_BALBcJ_T0101803.1 MGP_BALBcJ_G0039741.1 mouse_genomes_project X 102959794 102961013 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101804.1 MGP_BALBcJ_G0039741.1 mouse_genomes_project X 102959803 102960958 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0097414.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772209 129776114 + MGP_BALBcJ_P0097414 Armcx1 protein_coding protein_coding MGP_BALBcJ_T0097415.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772216 129776123 + MGP_BALBcJ_P0097415 Armcx1 protein_coding protein_coding MGP_BALBcJ_T0097416.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772234 129773567 + Armcx1 protein_coding processed_transcript MGP_BALBcJ_T0097417.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772234 129776116 + MGP_BALBcJ_P0097417 Armcx1 protein_coding protein_coding MGP_BALBcJ_T0097418.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772235 129776123 + MGP_BALBcJ_P0097418 Armcx1 protein_coding protein_coding MGP_BALBcJ_T0097419.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772249 129773761 + Armcx1 protein_coding processed_transcript MGP_BALBcJ_T0097420.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772249 129773282 + Armcx1 protein_coding processed_transcript MGP_BALBcJ_T0097421.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772259 129776114 + MGP_BALBcJ_P0097421 Armcx1 protein_coding protein_coding MGP_BALBcJ_T0097422.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129772266 129776123 + MGP_BALBcJ_P0097422 Armcx1 protein_coding protein_coding MGP_BALBcJ_T0097423.1 MGP_BALBcJ_G0036048.1 mouse_genomes_project X 129773510 129774721 + Armcx1 protein_coding processed_transcript MGP_BALBcJ_T0096755.1 MGP_BALBcJ_G0035844.1 mouse_genomes_project X 73431630 73433116 + MGP_BALBcJ_P0096755 4930480E11Rik protein_coding protein_coding MGP_BALBcJ_T0101561.1 MGP_BALBcJ_G0039597.1 mouse_genomes_project X 151708767 151708864 - Gm23404 snoRNA snoRNA MGP_BALBcJ_T0096971.1 MGP_BALBcJ_G0035907.1 mouse_genomes_project X 95649928 95659670 - MGP_BALBcJ_P0096971 Awat2 protein_coding protein_coding MGP_BALBcJ_T0016579.1 MGP_BALBcJ_G0014676.1 mouse_genomes_project X 103476905 103481736 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016271.1 MGP_BALBcJ_G0014368.1 mouse_genomes_project X 42254280 42255833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096204.1 MGP_BALBcJ_G0035718.1 mouse_genomes_project X 52353600 52363048 - MGP_BALBcJ_P0096204 Rbmx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096205.1 MGP_BALBcJ_G0035718.1 mouse_genomes_project X 52356425 52363029 - MGP_BALBcJ_P0096205 Rbmx protein_coding protein_coding MGP_BALBcJ_T0096206.1 MGP_BALBcJ_G0035718.1 mouse_genomes_project X 52356429 52363103 - MGP_BALBcJ_P0096206 Rbmx protein_coding protein_coding MGP_BALBcJ_T0096207.1 MGP_BALBcJ_G0035718.1 mouse_genomes_project X 52356983 52363087 - MGP_BALBcJ_P0096207 Rbmx protein_coding protein_coding MGP_BALBcJ_T0096208.1 MGP_BALBcJ_G0035718.1 mouse_genomes_project X 52358087 52363041 - MGP_BALBcJ_P0096208 Rbmx protein_coding unknown_likely_coding MGP_BALBcJ_T0096209.1 MGP_BALBcJ_G0035718.1 mouse_genomes_project X 52360210 52362864 - MGP_BALBcJ_P0096209 Rbmx protein_coding protein_coding MGP_BALBcJ_T0097530.1 MGP_BALBcJ_G0036085.1 mouse_genomes_project X 134134219 134229668 + MGP_BALBcJ_P0097530 Nrk protein_coding protein_coding MGP_BALBcJ_T0097531.1 MGP_BALBcJ_G0036085.1 mouse_genomes_project X 134134220 134186522 + Nrk protein_coding processed_transcript MGP_BALBcJ_T0097532.1 MGP_BALBcJ_G0036085.1 mouse_genomes_project X 134134220 134231108 + MGP_BALBcJ_P0097532 Nrk protein_coding protein_coding MGP_BALBcJ_T0097533.1 MGP_BALBcJ_G0036085.1 mouse_genomes_project X 134134220 134230380 + MGP_BALBcJ_P0097533 Nrk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097534.1 MGP_BALBcJ_G0036085.1 mouse_genomes_project X 134203282 134210343 + Nrk protein_coding retained_intron MGP_BALBcJ_T0101798.1 MGP_BALBcJ_G0039737.1 mouse_genomes_project X 69269408 69269738 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0097029.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96518395 96541831 + MGP_BALBcJ_P0097029 Med12 protein_coding protein_coding MGP_BALBcJ_T0097030.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96518594 96541831 + MGP_BALBcJ_P0097030 Med12 protein_coding protein_coding MGP_BALBcJ_T0097031.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96518625 96541831 + MGP_BALBcJ_P0097031 Med12 protein_coding protein_coding MGP_BALBcJ_T0097032.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96518625 96541831 + MGP_BALBcJ_P0097032 Med12 protein_coding protein_coding MGP_BALBcJ_T0097033.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96527061 96528523 + Med12 protein_coding retained_intron MGP_BALBcJ_T0097034.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96527551 96528294 + Med12 protein_coding processed_transcript MGP_BALBcJ_T0097035.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96530389 96541831 + Med12 protein_coding retained_intron MGP_BALBcJ_T0097036.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96537499 96540433 + Med12 protein_coding processed_transcript MGP_BALBcJ_T0097037.1 MGP_BALBcJ_G0035925.1 mouse_genomes_project X 96540934 96541753 + Med12 protein_coding processed_transcript MGP_BALBcJ_T0016738.1 MGP_BALBcJ_G0014835.1 mouse_genomes_project X 137559205 137559415 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100258.1 MGP_BALBcJ_G0038294.1 mouse_genomes_project X 54131983 54132077 + Gm26487 snRNA snRNA MGP_BALBcJ_T0016439.1 MGP_BALBcJ_G0014536.1 mouse_genomes_project X 81267495 81274966 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100309.1 MGP_BALBcJ_G0038345.1 mouse_genomes_project X 163887239 163887351 - Gm23197 snRNA snRNA MGP_BALBcJ_T0016507.1 MGP_BALBcJ_G0014604.1 mouse_genomes_project X 94211109 94211504 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011103.1 MGP_BALBcJ_G0009228.1 mouse_genomes_project X 15566849 15566927 - Gm24824 miRNA miRNA MGP_BALBcJ_T0016261.1 MGP_BALBcJ_G0014358.1 mouse_genomes_project X 39554507 39555477 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097873.1 MGP_BALBcJ_G0036173.1 mouse_genomes_project X 150388943 150391702 - MGP_BALBcJ_P0097873 protein_coding protein_coding MGP_BALBcJ_T0016293.1 MGP_BALBcJ_G0014390.1 mouse_genomes_project X 48246351 48246911 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100248.1 MGP_BALBcJ_G0038284.1 mouse_genomes_project X 37937609 37937799 + Gm24763 snRNA snRNA MGP_BALBcJ_T0096352.1 MGP_BALBcJ_G0035767.1 mouse_genomes_project X 67838696 67869075 + MGP_BALBcJ_P0096352 Nsdhl protein_coding protein_coding MGP_BALBcJ_T0096353.1 MGP_BALBcJ_G0035767.1 mouse_genomes_project X 67849815 67864213 + Nsdhl protein_coding retained_intron MGP_BALBcJ_T0097334.1 MGP_BALBcJ_G0036021.1 mouse_genomes_project X 121121876 121124911 - MGP_BALBcJ_P0097334 protein_coding protein_coding MGP_BALBcJ_T0009426.1 MGP_BALBcJ_G0007553.1 mouse_genomes_project X 162425921 162433023 + Gm15228 lincRNA lincRNA MGP_BALBcJ_T0016564.1 MGP_BALBcJ_G0014661.1 mouse_genomes_project X 101119471 101119858 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016542.1 MGP_BALBcJ_G0014639.1 mouse_genomes_project X 98867183 98867584 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096191.1 MGP_BALBcJ_G0035715.1 mouse_genomes_project X 52054568 52073534 + MGP_BALBcJ_P0096191 Vgll1 protein_coding protein_coding MGP_BALBcJ_T0096192.1 MGP_BALBcJ_G0035715.1 mouse_genomes_project X 52055774 52072523 + MGP_BALBcJ_P0096192 Vgll1 protein_coding protein_coding MGP_BALBcJ_T0096193.1 MGP_BALBcJ_G0035715.1 mouse_genomes_project X 52055836 52073534 + MGP_BALBcJ_P0096193 Vgll1 protein_coding protein_coding MGP_BALBcJ_T0096194.1 MGP_BALBcJ_G0035715.1 mouse_genomes_project X 52066283 52069055 + MGP_BALBcJ_P0096194 Vgll1 protein_coding protein_coding MGP_BALBcJ_T0096603.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69315344 69322911 + MGP_BALBcJ_P0096603 Gdi1 protein_coding protein_coding MGP_BALBcJ_T0096604.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69315358 69322909 + Gdi1 protein_coding retained_intron MGP_BALBcJ_T0096605.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69315602 69317354 + Gdi1 protein_coding processed_transcript MGP_BALBcJ_T0096606.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69315613 69322907 + Gdi1 protein_coding retained_intron MGP_BALBcJ_T0096607.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69315659 69317491 + MGP_BALBcJ_P0096607 Gdi1 protein_coding protein_coding MGP_BALBcJ_T0096608.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69316174 69317532 + Gdi1 protein_coding processed_transcript MGP_BALBcJ_T0096609.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69317495 69320123 + Gdi1 protein_coding retained_intron MGP_BALBcJ_T0096610.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69319502 69321712 + MGP_BALBcJ_P0096610 Gdi1 protein_coding protein_coding MGP_BALBcJ_T0096611.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69320407 69321492 + Gdi1 protein_coding processed_transcript MGP_BALBcJ_T0096612.1 MGP_BALBcJ_G0035806.1 mouse_genomes_project X 69320936 69321589 + Gdi1 protein_coding processed_transcript MGP_BALBcJ_T0011756.1 MGP_BALBcJ_G0009881.1 mouse_genomes_project X 131910044 131910337 + Gm23068 misc_RNA misc_RNA MGP_BALBcJ_T0016689.1 MGP_BALBcJ_G0014786.1 mouse_genomes_project X 131501490 131502864 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016618.1 MGP_BALBcJ_G0014715.1 mouse_genomes_project X 110622601 110623647 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011165.1 MGP_BALBcJ_G0009290.1 mouse_genomes_project X 89472279 89472343 + Mir7673 miRNA miRNA MGP_BALBcJ_T0018559.1 MGP_BALBcJ_G0015705.1 mouse_genomes_project X 1967885 1970003 + Gm14379 processed_transcript processed_transcript MGP_BALBcJ_T0095816.1 MGP_BALBcJ_G0035578.1 mouse_genomes_project X 16242329 16246950 + MGP_BALBcJ_P0095816 Agtr2 protein_coding protein_coding MGP_BALBcJ_T0095817.1 MGP_BALBcJ_G0035578.1 mouse_genomes_project X 16242507 16244089 + Agtr2 protein_coding processed_transcript MGP_BALBcJ_T0016356.1 MGP_BALBcJ_G0014453.1 mouse_genomes_project X 62694010 62694573 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097633.1 MGP_BALBcJ_G0036121.1 mouse_genomes_project X 138235103 138239815 + MGP_BALBcJ_P0097633 Rgag1 protein_coding protein_coding MGP_BALBcJ_T0011205.1 MGP_BALBcJ_G0009330.1 mouse_genomes_project X 162224382 162224510 + Gm44376 miRNA miRNA MGP_BALBcJ_T0016554.1 MGP_BALBcJ_G0014651.1 mouse_genomes_project X 99765412 99765877 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016370.1 MGP_BALBcJ_G0014467.1 mouse_genomes_project X 65560081 65560626 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101547.1 MGP_BALBcJ_G0039583.1 mouse_genomes_project X 121871256 121871379 + Gm23586 snoRNA snoRNA MGP_BALBcJ_T0016304.1 MGP_BALBcJ_G0014401.1 mouse_genomes_project X 52685864 52687873 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100254.1 MGP_BALBcJ_G0038290.1 mouse_genomes_project X 51687119 51687284 + Gm26312 snRNA snRNA MGP_BALBcJ_T0096142.1 MGP_BALBcJ_G0035693.1 mouse_genomes_project X 48068756 48077492 + MGP_BALBcJ_P0096142 Etd protein_coding protein_coding MGP_BALBcJ_T0096012.1 MGP_BALBcJ_G0035650.1 mouse_genomes_project X 39479877 39483505 - MGP_BALBcJ_P0096012 Dcaf12l1 protein_coding protein_coding MGP_BALBcJ_T0096013.1 MGP_BALBcJ_G0035650.1 mouse_genomes_project X 39479877 39483469 - MGP_BALBcJ_P0096013 Dcaf12l1 protein_coding protein_coding MGP_BALBcJ_T0100259.1 MGP_BALBcJ_G0038295.1 mouse_genomes_project X 55181973 55182080 + Gm22287 snRNA snRNA MGP_BALBcJ_T0016322.1 MGP_BALBcJ_G0014419.1 mouse_genomes_project X 55763577 55764152 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096196.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52200957 52210352 - Arhgef6 protein_coding retained_intron MGP_BALBcJ_T0096197.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52200957 52309015 - MGP_BALBcJ_P0096197 Arhgef6 protein_coding protein_coding MGP_BALBcJ_T0096198.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52202912 52251682 - MGP_BALBcJ_P0096198 Arhgef6 protein_coding protein_coding MGP_BALBcJ_T0096199.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52208692 52221073 - MGP_BALBcJ_P0096199 Arhgef6 protein_coding protein_coding MGP_BALBcJ_T0096200.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52218715 52296906 - MGP_BALBcJ_P0096200 Arhgef6 protein_coding protein_coding MGP_BALBcJ_T0096201.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52242315 52296908 - Arhgef6 protein_coding retained_intron MGP_BALBcJ_T0096202.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52268808 52271162 - Arhgef6 protein_coding processed_transcript MGP_BALBcJ_T0096203.1 MGP_BALBcJ_G0035717.1 mouse_genomes_project X 52306189 52308792 - Arhgef6 protein_coding retained_intron MGP_BALBcJ_T0096820.1 MGP_BALBcJ_G0035867.1 mouse_genomes_project X 86790683 86794158 + MGP_BALBcJ_P0096820 Mageb5 protein_coding protein_coding MGP_BALBcJ_T0016598.1 MGP_BALBcJ_G0014695.1 mouse_genomes_project X 107981632 107981795 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016401.1 MGP_BALBcJ_G0014498.1 mouse_genomes_project X 72348133 72348661 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016361.1 MGP_BALBcJ_G0014458.1 mouse_genomes_project X 63567807 63568155 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100283.1 MGP_BALBcJ_G0038319.1 mouse_genomes_project X 106005725 106005916 - Gm26108 snRNA snRNA MGP_BALBcJ_T0005555.1 MGP_BALBcJ_G0004683.1 mouse_genomes_project X 40997635 41049679 - 4930515L19Rik antisense antisense MGP_BALBcJ_T0016458.1 MGP_BALBcJ_G0014555.1 mouse_genomes_project X 85766358 85766875 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016380.1 MGP_BALBcJ_G0014477.1 mouse_genomes_project X 69287937 69288153 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097128.1 MGP_BALBcJ_G0035947.1 mouse_genomes_project X 98176863 98182554 + MGP_BALBcJ_P0097128 protein_coding protein_coding MGP_BALBcJ_T0016423.1 MGP_BALBcJ_G0014520.1 mouse_genomes_project X 76730285 76735774 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097871.1 MGP_BALBcJ_G0036171.1 mouse_genomes_project X 149857535 149864813 + MGP_BALBcJ_P0097871 protein_coding protein_coding MGP_BALBcJ_T0016674.1 MGP_BALBcJ_G0014771.1 mouse_genomes_project X 128117310 128118933 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096829.1 MGP_BALBcJ_G0035873.1 mouse_genomes_project X 88473340 88797607 - MGP_BALBcJ_P0096829 Pola1 protein_coding protein_coding MGP_BALBcJ_T0096830.1 MGP_BALBcJ_G0035873.1 mouse_genomes_project X 88649347 88659805 - Pola1 protein_coding processed_transcript MGP_BALBcJ_T0096831.1 MGP_BALBcJ_G0035873.1 mouse_genomes_project X 88788499 88797595 - Pola1 protein_coding retained_intron MGP_BALBcJ_T0096832.1 MGP_BALBcJ_G0035873.1 mouse_genomes_project X 88788720 88797567 - Pola1 protein_coding processed_transcript MGP_BALBcJ_T0096324.1 MGP_BALBcJ_G0035756.1 mouse_genomes_project X 66785776 66794988 + MGP_BALBcJ_P0096324 Vma21 protein_coding protein_coding MGP_BALBcJ_T0096325.1 MGP_BALBcJ_G0035756.1 mouse_genomes_project X 66786610 66794988 + MGP_BALBcJ_P0096325 Vma21 protein_coding protein_coding MGP_BALBcJ_T0096326.1 MGP_BALBcJ_G0035756.1 mouse_genomes_project X 66786642 66809566 + Vma21 protein_coding processed_transcript MGP_BALBcJ_T0096327.1 MGP_BALBcJ_G0035756.1 mouse_genomes_project X 66786642 66794988 + MGP_BALBcJ_P0096327 Vma21 protein_coding protein_coding MGP_BALBcJ_T0096328.1 MGP_BALBcJ_G0035756.1 mouse_genomes_project X 66786665 66790837 + Vma21 protein_coding processed_transcript MGP_BALBcJ_T0100295.1 MGP_BALBcJ_G0038331.1 mouse_genomes_project X 140769828 140769926 - Gm27659 snRNA snRNA MGP_BALBcJ_T0005569.1 MGP_BALBcJ_G0004695.1 mouse_genomes_project X 70617160 70617868 + Gm15384 antisense antisense MGP_BALBcJ_T0016486.1 MGP_BALBcJ_G0014583.1 mouse_genomes_project X 89905729 89907347 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102844.1 MGP_BALBcJ_G0040659.1 mouse_genomes_project X 3858826 3859339 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016745.1 MGP_BALBcJ_G0014842.1 mouse_genomes_project X 139349566 139349876 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097632.1 MGP_BALBcJ_G0036120.1 mouse_genomes_project X 137986936 138102662 - MGP_BALBcJ_P0097632 Ammecr1 protein_coding protein_coding MGP_BALBcJ_T0016184.1 MGP_BALBcJ_G0014281.1 mouse_genomes_project X 10166191 10166503 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096112.1 MGP_BALBcJ_G0035681.1 mouse_genomes_project X 46011203 46299361 - MGP_BALBcJ_P0096112 Hs6st2 protein_coding protein_coding MGP_BALBcJ_T0096113.1 MGP_BALBcJ_G0035681.1 mouse_genomes_project X 46011203 46299514 - MGP_BALBcJ_P0096113 Hs6st2 protein_coding protein_coding MGP_BALBcJ_T0096114.1 MGP_BALBcJ_G0035681.1 mouse_genomes_project X 46294440 46299006 - Hs6st2 protein_coding retained_intron MGP_BALBcJ_T0096115.1 MGP_BALBcJ_G0035681.1 mouse_genomes_project X 46297649 46298223 - Hs6st2 protein_coding processed_transcript MGP_BALBcJ_T0096116.1 MGP_BALBcJ_G0035681.1 mouse_genomes_project X 46297835 46298744 - Hs6st2 protein_coding processed_transcript MGP_BALBcJ_T0096836.1 MGP_BALBcJ_G0035875.1 mouse_genomes_project X 88927727 88994860 - MGP_BALBcJ_P0096836 Pdk3 protein_coding protein_coding MGP_BALBcJ_T0096837.1 MGP_BALBcJ_G0035875.1 mouse_genomes_project X 88928216 88932271 - Pdk3 protein_coding processed_transcript MGP_BALBcJ_T0096838.1 MGP_BALBcJ_G0035875.1 mouse_genomes_project X 88944545 88952001 - Pdk3 protein_coding processed_transcript MGP_BALBcJ_T0016832.1 MGP_BALBcJ_G0014929.1 mouse_genomes_project X 156747097 156748016 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097107.1 MGP_BALBcJ_G0035942.1 mouse_genomes_project X 97529455 97538343 - MGP_BALBcJ_P0097107 Cited1 protein_coding protein_coding MGP_BALBcJ_T0097108.1 MGP_BALBcJ_G0035942.1 mouse_genomes_project X 97529478 97538014 - MGP_BALBcJ_P0097108 Cited1 protein_coding protein_coding MGP_BALBcJ_T0097109.1 MGP_BALBcJ_G0035942.1 mouse_genomes_project X 97529788 97537108 - MGP_BALBcJ_P0097109 Cited1 protein_coding protein_coding MGP_BALBcJ_T0097110.1 MGP_BALBcJ_G0035942.1 mouse_genomes_project X 97529895 97536937 - MGP_BALBcJ_P0097110 Cited1 protein_coding protein_coding MGP_BALBcJ_T0097111.1 MGP_BALBcJ_G0035942.1 mouse_genomes_project X 97529960 97538080 - MGP_BALBcJ_P0097111 Cited1 protein_coding protein_coding MGP_BALBcJ_T0100280.1 MGP_BALBcJ_G0038316.1 mouse_genomes_project X 102090687 102090794 - Gm24491 snRNA snRNA MGP_BALBcJ_T0096994.1 MGP_BALBcJ_G0035916.1 mouse_genomes_project X 95976203 95978728 + Gdpd2 protein_coding processed_transcript MGP_BALBcJ_T0096995.1 MGP_BALBcJ_G0035916.1 mouse_genomes_project X 95976268 95981492 + Gdpd2 protein_coding retained_intron MGP_BALBcJ_T0096996.1 MGP_BALBcJ_G0035916.1 mouse_genomes_project X 95976272 95985173 + MGP_BALBcJ_P0096996 Gdpd2 protein_coding protein_coding MGP_BALBcJ_T0096997.1 MGP_BALBcJ_G0035916.1 mouse_genomes_project X 95976516 95985173 + MGP_BALBcJ_P0096997 Gdpd2 protein_coding protein_coding MGP_BALBcJ_T0096998.1 MGP_BALBcJ_G0035916.1 mouse_genomes_project X 95982618 95985174 + Gdpd2 protein_coding retained_intron MGP_BALBcJ_T0097194.1 MGP_BALBcJ_G0035970.1 mouse_genomes_project X 101410137 101417060 + MGP_BALBcJ_P0097194 Cox7b protein_coding protein_coding MGP_BALBcJ_T0097195.1 MGP_BALBcJ_G0035970.1 mouse_genomes_project X 101410153 101410567 + Cox7b protein_coding processed_transcript MGP_BALBcJ_T0097196.1 MGP_BALBcJ_G0035970.1 mouse_genomes_project X 101413881 101416568 + Cox7b protein_coding retained_intron MGP_BALBcJ_T0096096.1 MGP_BALBcJ_G0035675.1 mouse_genomes_project X 44617912 44618842 - MGP_BALBcJ_P0096096 Olfr1323 protein_coding protein_coding MGP_BALBcJ_T0096241.1 MGP_BALBcJ_G0035731.1 mouse_genomes_project X 57195355 57203936 + MGP_BALBcJ_P0096241 4933402E13Rik protein_coding protein_coding MGP_BALBcJ_T0096242.1 MGP_BALBcJ_G0035731.1 mouse_genomes_project X 57198999 57203936 + MGP_BALBcJ_P0096242 4933402E13Rik protein_coding protein_coding MGP_BALBcJ_T0100285.1 MGP_BALBcJ_G0038321.1 mouse_genomes_project X 110442681 110442805 - Gm25366 snRNA snRNA MGP_BALBcJ_T0095433.1 MGP_BALBcJ_G0035478.1 mouse_genomes_project X 949554 956169 - MGP_BALBcJ_P0095433 Bmp15 protein_coding protein_coding MGP_BALBcJ_T0096344.1 MGP_BALBcJ_G0035764.1 mouse_genomes_project X 67369391 67592879 - MGP_BALBcJ_P0096344 Gabra3 protein_coding protein_coding MGP_BALBcJ_T0096345.1 MGP_BALBcJ_G0035764.1 mouse_genomes_project X 67371285 67593403 - MGP_BALBcJ_P0096345 Gabra3 protein_coding protein_coding MGP_BALBcJ_T0096346.1 MGP_BALBcJ_G0035764.1 mouse_genomes_project X 67441560 67592910 - Gabra3 protein_coding processed_transcript MGP_BALBcJ_T0009419.1 MGP_BALBcJ_G0007548.1 mouse_genomes_project X 161889994 161893434 - Gm15226 lincRNA lincRNA MGP_BALBcJ_T0098008.1 MGP_BALBcJ_G0036204.1 mouse_genomes_project X 158011842 158043137 - Txlng protein_coding retained_intron MGP_BALBcJ_T0098009.1 MGP_BALBcJ_G0036204.1 mouse_genomes_project X 158011842 158059839 - MGP_BALBcJ_P0098009 Txlng protein_coding protein_coding MGP_BALBcJ_T0098010.1 MGP_BALBcJ_G0036204.1 mouse_genomes_project X 158011842 158059839 - MGP_BALBcJ_P0098010 Txlng protein_coding protein_coding MGP_BALBcJ_T0098011.1 MGP_BALBcJ_G0036204.1 mouse_genomes_project X 158021842 158059839 - MGP_BALBcJ_P0098011 Txlng protein_coding protein_coding MGP_BALBcJ_T0098012.1 MGP_BALBcJ_G0036204.1 mouse_genomes_project X 158023522 158059725 - MGP_BALBcJ_P0098012 Txlng protein_coding protein_coding MGP_BALBcJ_T0098013.1 MGP_BALBcJ_G0036204.1 mouse_genomes_project X 158058444 158059839 - Txlng protein_coding processed_transcript MGP_BALBcJ_T0102874.1 MGP_BALBcJ_G0040689.1 mouse_genomes_project X 87258299 87259343 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016840.1 MGP_BALBcJ_G0014937.1 mouse_genomes_project X 158448263 158448748 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016663.1 MGP_BALBcJ_G0014760.1 mouse_genomes_project X 125480559 125481235 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016527.1 MGP_BALBcJ_G0014624.1 mouse_genomes_project X 97925467 97926872 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016262.1 MGP_BALBcJ_G0014359.1 mouse_genomes_project X 40128901 40130056 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100289.1 MGP_BALBcJ_G0038325.1 mouse_genomes_project X 123677962 123678070 + Gm24522 snRNA snRNA MGP_BALBcJ_T0100232.1 MGP_BALBcJ_G0038268.1 mouse_genomes_project X 4301948 4302106 - Gm25728 snRNA snRNA MGP_BALBcJ_T0095884.1 MGP_BALBcJ_G0035605.1 mouse_genomes_project X 31926604 31927827 + MGP_BALBcJ_P0095884 Rnf113a1 protein_coding protein_coding MGP_BALBcJ_T0097607.1 MGP_BALBcJ_G0036108.1 mouse_genomes_project X 136204214 136297908 + MGP_BALBcJ_P0097607 Atg4a protein_coding protein_coding MGP_BALBcJ_T0097608.1 MGP_BALBcJ_G0036108.1 mouse_genomes_project X 136204257 136240110 + Atg4a protein_coding processed_transcript MGP_BALBcJ_T0097610.1 MGP_BALBcJ_G0036108.1 mouse_genomes_project X 136295362 136296723 + Atg4a protein_coding retained_intron MGP_BALBcJ_T0096312.1 MGP_BALBcJ_G0035753.1 mouse_genomes_project X 66387721 66461999 - MGP_BALBcJ_P0096312 Cd99l2 protein_coding protein_coding MGP_BALBcJ_T0096313.1 MGP_BALBcJ_G0035753.1 mouse_genomes_project X 66387721 66461795 - MGP_BALBcJ_P0096313 Cd99l2 protein_coding protein_coding MGP_BALBcJ_T0096314.1 MGP_BALBcJ_G0035753.1 mouse_genomes_project X 66387721 66461999 - MGP_BALBcJ_P0096314 Cd99l2 protein_coding protein_coding MGP_BALBcJ_T0096315.1 MGP_BALBcJ_G0035753.1 mouse_genomes_project X 66390283 66461999 - MGP_BALBcJ_P0096315 Cd99l2 protein_coding protein_coding MGP_BALBcJ_T0096316.1 MGP_BALBcJ_G0035753.1 mouse_genomes_project X 66406986 66461799 - Cd99l2 protein_coding retained_intron MGP_BALBcJ_T0096317.1 MGP_BALBcJ_G0035753.1 mouse_genomes_project X 66461048 66461755 - Cd99l2 protein_coding processed_transcript MGP_BALBcJ_T0018603.1 MGP_BALBcJ_G0015723.1 mouse_genomes_project X 97538683 97644781 + Gm14858 processed_transcript processed_transcript MGP_BALBcJ_T0018604.1 MGP_BALBcJ_G0015723.1 mouse_genomes_project X 97538812 97544183 + Gm14858 processed_transcript processed_transcript MGP_BALBcJ_T0016309.1 MGP_BALBcJ_G0014406.1 mouse_genomes_project X 53366298 53366715 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009398.1 MGP_BALBcJ_G0007534.1 mouse_genomes_project X 112553914 112554283 + Gm28579 lincRNA lincRNA MGP_BALBcJ_T0097156.1 MGP_BALBcJ_G0035963.1 mouse_genomes_project X 99921882 100053059 - MGP_BALBcJ_P0097156 Zdhhc15 protein_coding protein_coding MGP_BALBcJ_T0018601.1 MGP_BALBcJ_G0015721.1 mouse_genomes_project X 95983261 95987377 - Gm14866 processed_transcript processed_transcript MGP_BALBcJ_T0011192.1 MGP_BALBcJ_G0009317.1 mouse_genomes_project X 142107166 142107271 + Gm22650 miRNA miRNA MGP_BALBcJ_T0016376.1 MGP_BALBcJ_G0014473.1 mouse_genomes_project X 66696650 66696865 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095442.1 MGP_BALBcJ_G0035483.1 mouse_genomes_project X 1743061 1778061 - MGP_BALBcJ_P0095442 Clcn5 protein_coding protein_coding MGP_BALBcJ_T0095443.1 MGP_BALBcJ_G0035483.1 mouse_genomes_project X 1748721 1911195 - MGP_BALBcJ_P0095443 Clcn5 protein_coding protein_coding MGP_BALBcJ_T0095444.1 MGP_BALBcJ_G0035483.1 mouse_genomes_project X 1749429 1778020 - Clcn5 protein_coding retained_intron MGP_BALBcJ_T0095445.1 MGP_BALBcJ_G0035483.1 mouse_genomes_project X 1760451 1911320 - MGP_BALBcJ_P0095445 Clcn5 protein_coding protein_coding MGP_BALBcJ_T0095446.1 MGP_BALBcJ_G0035483.1 mouse_genomes_project X 1802995 1911132 - Clcn5 protein_coding processed_transcript MGP_BALBcJ_T0101991.1 MGP_BALBcJ_G0039833.1 mouse_genomes_project X 130584937 130587737 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0102862.1 MGP_BALBcJ_G0040677.1 mouse_genomes_project X 69787756 69788623 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0096211.1 MGP_BALBcJ_G0035720.1 mouse_genomes_project X 52469207 52476388 - MGP_BALBcJ_P0096211 Gpr101 protein_coding protein_coding MGP_BALBcJ_T0016502.1 MGP_BALBcJ_G0014599.1 mouse_genomes_project X 92445806 92447074 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005557.1 MGP_BALBcJ_G0004685.1 mouse_genomes_project X 46905282 46942985 + Gm14582 antisense antisense MGP_BALBcJ_T0016252.1 MGP_BALBcJ_G0014349.1 mouse_genomes_project X 37586621 37587012 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018567.1 MGP_BALBcJ_G0015710.1 mouse_genomes_project X 7542310 7601281 + Gm14634 processed_transcript processed_transcript MGP_BALBcJ_T0018568.1 MGP_BALBcJ_G0015710.1 mouse_genomes_project X 7542576 7598008 + Gm14634 processed_transcript processed_transcript MGP_BALBcJ_T0097221.1 MGP_BALBcJ_G0035980.1 mouse_genomes_project X 102344650 102357920 + MGP_BALBcJ_P0097221 Lpar4 protein_coding protein_coding MGP_BALBcJ_T0097998.1 MGP_BALBcJ_G0036202.1 mouse_genomes_project X 157653558 157808738 - MGP_BALBcJ_P0097998 Reps2 protein_coding protein_coding MGP_BALBcJ_T0097999.1 MGP_BALBcJ_G0036202.1 mouse_genomes_project X 157653558 157884312 - MGP_BALBcJ_P0097999 Reps2 protein_coding protein_coding MGP_BALBcJ_T0098000.1 MGP_BALBcJ_G0036202.1 mouse_genomes_project X 157653558 157884360 - MGP_BALBcJ_P0098000 Reps2 protein_coding protein_coding MGP_BALBcJ_T0098001.1 MGP_BALBcJ_G0036202.1 mouse_genomes_project X 157768527 157808836 - Reps2 protein_coding processed_transcript MGP_BALBcJ_T0098002.1 MGP_BALBcJ_G0036202.1 mouse_genomes_project X 157786981 157794798 - Reps2 protein_coding retained_intron MGP_BALBcJ_T0016405.1 MGP_BALBcJ_G0014502.1 mouse_genomes_project X 73418610 73418941 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097124.1 MGP_BALBcJ_G0035945.1 mouse_genomes_project X 98004662 98007419 + MGP_BALBcJ_P0097124 Dmrtc1b protein_coding protein_coding MGP_BALBcJ_T0097125.1 MGP_BALBcJ_G0035945.1 mouse_genomes_project X 98004687 98007419 + MGP_BALBcJ_P0097125 Dmrtc1b protein_coding protein_coding MGP_BALBcJ_T0101535.1 MGP_BALBcJ_G0039571.1 mouse_genomes_project X 77571361 77571493 - Gm24470 snoRNA snoRNA MGP_BALBcJ_T0102859.1 MGP_BALBcJ_G0040674.1 mouse_genomes_project X 65503908 65504736 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016443.1 MGP_BALBcJ_G0014540.1 mouse_genomes_project X 83028819 83029355 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009343.1 MGP_BALBcJ_G0007501.1 mouse_genomes_project X 10696451 10699125 - lincRNA lincRNA MGP_BALBcJ_T0009344.1 MGP_BALBcJ_G0007501.1 mouse_genomes_project X 10696451 10709261 - lincRNA lincRNA MGP_BALBcJ_T0096130.1 MGP_BALBcJ_G0035689.1 mouse_genomes_project X 47697286 47868365 - MGP_BALBcJ_P0096130 Plac1 protein_coding protein_coding MGP_BALBcJ_T0096131.1 MGP_BALBcJ_G0035689.1 mouse_genomes_project X 47697287 47741674 - MGP_BALBcJ_P0096131 Plac1 protein_coding protein_coding MGP_BALBcJ_T0096132.1 MGP_BALBcJ_G0035689.1 mouse_genomes_project X 47697463 47837468 - MGP_BALBcJ_P0096132 Plac1 protein_coding protein_coding MGP_BALBcJ_T0098118.1 MGP_BALBcJ_G0036234.1 mouse_genomes_project X 162498351 162513753 - MGP_BALBcJ_P0098118 Tlr8 protein_coding protein_coding MGP_BALBcJ_T0098119.1 MGP_BALBcJ_G0036234.1 mouse_genomes_project X 162498387 162513255 - MGP_BALBcJ_P0098119 Tlr8 protein_coding protein_coding MGP_BALBcJ_T0098120.1 MGP_BALBcJ_G0036234.1 mouse_genomes_project X 162500474 162513766 - Tlr8 protein_coding processed_transcript MGP_BALBcJ_T0098121.1 MGP_BALBcJ_G0036234.1 mouse_genomes_project X 162501198 162513796 - MGP_BALBcJ_P0098121 Tlr8 protein_coding protein_coding MGP_BALBcJ_T0098122.1 MGP_BALBcJ_G0036234.1 mouse_genomes_project X 162508819 162513751 - Tlr8 protein_coding processed_transcript MGP_BALBcJ_T0016326.1 MGP_BALBcJ_G0014423.1 mouse_genomes_project X 56310919 56311476 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009347.1 MGP_BALBcJ_G0007503.1 mouse_genomes_project X 15962324 15981182 - 4930453H23Rik lincRNA lincRNA MGP_BALBcJ_T0009348.1 MGP_BALBcJ_G0007503.1 mouse_genomes_project X 15962801 15963059 - 4930453H23Rik lincRNA lincRNA MGP_BALBcJ_T0009349.1 MGP_BALBcJ_G0007503.1 mouse_genomes_project X 15977926 15981080 - 4930453H23Rik lincRNA lincRNA MGP_BALBcJ_T0016152.1 MGP_BALBcJ_G0014249.1 mouse_genomes_project X 2656846 2657275 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016466.1 MGP_BALBcJ_G0014563.1 mouse_genomes_project X 86693254 86694401 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097936.1 MGP_BALBcJ_G0036189.1 mouse_genomes_project X 154792123 154817123 + MGP_BALBcJ_P0097936 A830080D01Rik protein_coding protein_coding MGP_BALBcJ_T0097937.1 MGP_BALBcJ_G0036189.1 mouse_genomes_project X 154798095 154858462 + MGP_BALBcJ_P0097937 A830080D01Rik protein_coding protein_coding MGP_BALBcJ_T0097938.1 MGP_BALBcJ_G0036189.1 mouse_genomes_project X 154798236 154858449 + MGP_BALBcJ_P0097938 A830080D01Rik protein_coding protein_coding MGP_BALBcJ_T0097939.1 MGP_BALBcJ_G0036189.1 mouse_genomes_project X 154807187 154817173 + MGP_BALBcJ_P0097939 A830080D01Rik protein_coding protein_coding MGP_BALBcJ_T0097940.1 MGP_BALBcJ_G0036189.1 mouse_genomes_project X 154832133 154857583 + A830080D01Rik protein_coding processed_transcript MGP_BALBcJ_T0097941.1 MGP_BALBcJ_G0036189.1 mouse_genomes_project X 154832822 154840383 + A830080D01Rik protein_coding retained_intron MGP_BALBcJ_T0016371.1 MGP_BALBcJ_G0014468.1 mouse_genomes_project X 65583216 65583592 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016231.1 MGP_BALBcJ_G0014328.1 mouse_genomes_project X 33627353 33628911 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097038.1 MGP_BALBcJ_G0035926.1 mouse_genomes_project X 96543516 96564620 + MGP_BALBcJ_P0097038 Nlgn3 protein_coding protein_coding MGP_BALBcJ_T0097039.1 MGP_BALBcJ_G0035926.1 mouse_genomes_project X 96543526 96563033 + MGP_BALBcJ_P0097039 Nlgn3 protein_coding protein_coding MGP_BALBcJ_T0097040.1 MGP_BALBcJ_G0035926.1 mouse_genomes_project X 96543545 96570695 + MGP_BALBcJ_P0097040 Nlgn3 protein_coding protein_coding MGP_BALBcJ_T0097041.1 MGP_BALBcJ_G0035926.1 mouse_genomes_project X 96544825 96546428 + Nlgn3 protein_coding processed_transcript MGP_BALBcJ_T0097042.1 MGP_BALBcJ_G0035926.1 mouse_genomes_project X 96558762 96562509 + Nlgn3 protein_coding processed_transcript MGP_BALBcJ_T0097618.1 MGP_BALBcJ_G0036112.1 mouse_genomes_project X 136853261 136867393 - MGP_BALBcJ_P0097618 Irs4 protein_coding protein_coding MGP_BALBcJ_T0016669.1 MGP_BALBcJ_G0014766.1 mouse_genomes_project X 126862272 126865173 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095913.1 MGP_BALBcJ_G0035621.1 mouse_genomes_project X 32485762 32489797 + MGP_BALBcJ_P0095913 Rhox5 protein_coding protein_coding MGP_BALBcJ_T0095914.1 MGP_BALBcJ_G0035621.1 mouse_genomes_project X 32485771 32489685 + MGP_BALBcJ_P0095914 Rhox5 protein_coding protein_coding MGP_BALBcJ_T0016417.1 MGP_BALBcJ_G0014514.1 mouse_genomes_project X 75207629 75207788 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011200.1 MGP_BALBcJ_G0009325.1 mouse_genomes_project X 146990138 146990214 + Mir3113 miRNA miRNA MGP_BALBcJ_T0016319.1 MGP_BALBcJ_G0014416.1 mouse_genomes_project X 55552348 55552790 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095569.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2542522 2560204 - MGP_BALBcJ_P0095569 Hdac6 protein_coding protein_coding MGP_BALBcJ_T0095570.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2542524 2560204 - MGP_BALBcJ_P0095570 Hdac6 protein_coding protein_coding MGP_BALBcJ_T0095571.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2542526 2560153 - Hdac6 protein_coding retained_intron MGP_BALBcJ_T0095572.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2543761 2560204 - MGP_BALBcJ_P0095572 Hdac6 protein_coding protein_coding MGP_BALBcJ_T0095573.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2543957 2546888 - Hdac6 protein_coding retained_intron MGP_BALBcJ_T0095574.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2549648 2550999 - Hdac6 protein_coding retained_intron MGP_BALBcJ_T0095575.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2549755 2552291 - Hdac6 protein_coding retained_intron MGP_BALBcJ_T0095576.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2555704 2559474 - Hdac6 protein_coding retained_intron MGP_BALBcJ_T0095577.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2555728 2559868 - MGP_BALBcJ_P0095577 Hdac6 protein_coding protein_coding MGP_BALBcJ_T0095578.1 MGP_BALBcJ_G0035509.1 mouse_genomes_project X 2559299 2560082 - MGP_BALBcJ_P0095578 Hdac6 protein_coding protein_coding MGP_BALBcJ_T0100302.1 MGP_BALBcJ_G0038338.1 mouse_genomes_project X 152307822 152307986 + Gm22666 snRNA snRNA MGP_BALBcJ_T0098166.1 MGP_BALBcJ_G0036244.1 mouse_genomes_project X 165264318 165264627 - MGP_BALBcJ_P0098166 Gm21748 protein_coding protein_coding MGP_BALBcJ_T0018605.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100437614 100470525 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018606.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100439225 100470475 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018607.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100439234 100470471 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018608.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100441271 100470553 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018609.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100441818 100470553 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018610.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100443076 100470516 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018611.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100443688 100470472 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018612.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100444220 100470484 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018613.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100444418 100470464 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018614.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100444493 100470537 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018615.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100463274 100470533 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018616.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100468293 100470523 - 5530601H04Rik processed_transcript retained_intron MGP_BALBcJ_T0018617.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100469540 100479808 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018618.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100475434 100476200 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018619.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100475654 100480005 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018620.1 MGP_BALBcJ_G0015724.1 mouse_genomes_project X 100477667 100479832 - 5530601H04Rik processed_transcript processed_transcript MGP_BALBcJ_T0101527.1 MGP_BALBcJ_G0039563.1 mouse_genomes_project X 68813066 68813131 + Gm23615 snoRNA snoRNA MGP_BALBcJ_T0009407.1 MGP_BALBcJ_G0007542.1 mouse_genomes_project X 145987167 145987708 - Gm27191 lincRNA lincRNA MGP_BALBcJ_T0095485.1 MGP_BALBcJ_G0035493.1 mouse_genomes_project X 2293742 2307465 + MGP_BALBcJ_P0095485 Gpkow protein_coding protein_coding MGP_BALBcJ_T0095486.1 MGP_BALBcJ_G0035493.1 mouse_genomes_project X 2300108 2305225 + MGP_BALBcJ_P0095486 Gpkow protein_coding protein_coding MGP_BALBcJ_T0095487.1 MGP_BALBcJ_G0035493.1 mouse_genomes_project X 2302456 2305414 + Gpkow protein_coding retained_intron MGP_BALBcJ_T0016325.1 MGP_BALBcJ_G0014422.1 mouse_genomes_project X 56030667 56031820 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016429.1 MGP_BALBcJ_G0014526.1 mouse_genomes_project X 79789227 79789539 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011143.1 MGP_BALBcJ_G0009268.1 mouse_genomes_project X 61841388 61841466 - Mir878 miRNA miRNA MGP_BALBcJ_T0097850.1 MGP_BALBcJ_G0036160.1 mouse_genomes_project X 148321246 148353138 + MGP_BALBcJ_P0097850 Rragb protein_coding protein_coding MGP_BALBcJ_T0097851.1 MGP_BALBcJ_G0036160.1 mouse_genomes_project X 148321252 148334442 + MGP_BALBcJ_P0097851 Rragb protein_coding protein_coding MGP_BALBcJ_T0011128.1 MGP_BALBcJ_G0009253.1 mouse_genomes_project X 47681661 47681756 - Mir322 miRNA miRNA MGP_BALBcJ_T0098050.1 MGP_BALBcJ_G0036214.1 mouse_genomes_project X 159338778 159374255 + MGP_BALBcJ_P0098050 Tmem27 protein_coding protein_coding MGP_BALBcJ_T0098051.1 MGP_BALBcJ_G0036214.1 mouse_genomes_project X 159340129 159374254 + MGP_BALBcJ_P0098051 Tmem27 protein_coding protein_coding MGP_BALBcJ_T0098052.1 MGP_BALBcJ_G0036214.1 mouse_genomes_project X 159342127 159373609 + MGP_BALBcJ_P0098052 Tmem27 protein_coding protein_coding MGP_BALBcJ_T0011161.1 MGP_BALBcJ_G0009286.1 mouse_genomes_project X 69283365 69283444 - Mir7091 miRNA miRNA MGP_BALBcJ_T0009375.1 MGP_BALBcJ_G0007524.1 mouse_genomes_project X 94661882 94701284 - Gm14812 lincRNA lincRNA MGP_BALBcJ_T0097804.1 MGP_BALBcJ_G0036147.1 mouse_genomes_project X 147135179 147141739 + MGP_BALBcJ_P0097804 Hsd17b10 protein_coding protein_coding MGP_BALBcJ_T0097805.1 MGP_BALBcJ_G0036147.1 mouse_genomes_project X 147135179 147141739 + MGP_BALBcJ_P0097805 Hsd17b10 protein_coding protein_coding MGP_BALBcJ_T0097806.1 MGP_BALBcJ_G0036147.1 mouse_genomes_project X 147135483 147141739 + Hsd17b10 protein_coding processed_transcript MGP_BALBcJ_T0097807.1 MGP_BALBcJ_G0036147.1 mouse_genomes_project X 147140693 147141739 + Hsd17b10 protein_coding retained_intron MGP_BALBcJ_T0096897.1 MGP_BALBcJ_G0035890.1 mouse_genomes_project X 91002378 91197697 + Zc3h12b protein_coding processed_transcript MGP_BALBcJ_T0096898.1 MGP_BALBcJ_G0035890.1 mouse_genomes_project X 91171393 91200909 + MGP_BALBcJ_P0096898 Zc3h12b protein_coding protein_coding MGP_BALBcJ_T0096899.1 MGP_BALBcJ_G0035890.1 mouse_genomes_project X 91172209 91205576 + MGP_BALBcJ_P0096899 Zc3h12b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0016142.1 MGP_BALBcJ_G0014239.1 mouse_genomes_project X 687070 687661 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096240.1 MGP_BALBcJ_G0035730.1 mouse_genomes_project X 56648412 56649871 + MGP_BALBcJ_P0096240 Ldoc1 protein_coding protein_coding MGP_BALBcJ_T0016683.1 MGP_BALBcJ_G0014780.1 mouse_genomes_project X 129894670 129895532 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102861.1 MGP_BALBcJ_G0040676.1 mouse_genomes_project X 68246266 68259424 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016547.1 MGP_BALBcJ_G0014644.1 mouse_genomes_project X 99031857 99033030 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100233.1 MGP_BALBcJ_G0038269.1 mouse_genomes_project X 6621234 6621341 + Gm26314 snRNA snRNA MGP_BALBcJ_T0016707.1 MGP_BALBcJ_G0014804.1 mouse_genomes_project X 133959985 133962634 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097126.1 MGP_BALBcJ_G0035946.1 mouse_genomes_project X 98132969 98139948 + MGP_BALBcJ_P0097126 protein_coding protein_coding MGP_BALBcJ_T0097127.1 MGP_BALBcJ_G0035946.1 mouse_genomes_project X 98134229 98135923 + MGP_BALBcJ_P0097127 protein_coding protein_coding MGP_BALBcJ_T0100296.1 MGP_BALBcJ_G0038332.1 mouse_genomes_project X 141393813 141393873 - Gm26151 snRNA snRNA MGP_BALBcJ_T0101521.1 MGP_BALBcJ_G0039557.1 mouse_genomes_project X 59550029 59550103 + Gm24598 snoRNA snoRNA MGP_BALBcJ_T0016562.1 MGP_BALBcJ_G0014659.1 mouse_genomes_project X 101084531 101084723 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097203.1 MGP_BALBcJ_G0035973.1 mouse_genomes_project X 101584058 101603644 + MGP_BALBcJ_P0097203 protein_coding protein_coding MGP_BALBcJ_T0097204.1 MGP_BALBcJ_G0035973.1 mouse_genomes_project X 101584121 101603606 + MGP_BALBcJ_P0097204 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097205.1 MGP_BALBcJ_G0035973.1 mouse_genomes_project X 101588715 101591926 + protein_coding retained_intron MGP_BALBcJ_T0095886.1 MGP_BALBcJ_G0035607.1 mouse_genomes_project X 31949714 31958696 - MGP_BALBcJ_P0095886 Rhox1 protein_coding protein_coding MGP_BALBcJ_T0096357.1 MGP_BALBcJ_G0035769.1 mouse_genomes_project X 67946282 67949612 - MGP_BALBcJ_P0096357 Pnma5 protein_coding protein_coding MGP_BALBcJ_T0096358.1 MGP_BALBcJ_G0035769.1 mouse_genomes_project X 67946289 67948612 - MGP_BALBcJ_P0096358 Pnma5 protein_coding protein_coding MGP_BALBcJ_T0011736.1 MGP_BALBcJ_G0009861.1 mouse_genomes_project X 47934732 47935039 + Gm23718 misc_RNA misc_RNA MGP_BALBcJ_T0016503.1 MGP_BALBcJ_G0014600.1 mouse_genomes_project X 93105584 93106311 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101525.1 MGP_BALBcJ_G0039561.1 mouse_genomes_project X 65641598 65641730 + Gm22785 snoRNA snoRNA MGP_BALBcJ_T0097900.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152803851 152838062 - Mbtps2 protein_coding processed_transcript MGP_BALBcJ_T0097901.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152816321 152868094 - MGP_BALBcJ_P0097901 Mbtps2 protein_coding protein_coding MGP_BALBcJ_T0097902.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152835005 152868029 - MGP_BALBcJ_P0097902 Mbtps2 protein_coding protein_coding MGP_BALBcJ_T0097903.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152835006 152868029 - MGP_BALBcJ_P0097903 Mbtps2 protein_coding protein_coding MGP_BALBcJ_T0097905.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152838122 152849066 - Mbtps2 protein_coding processed_transcript MGP_BALBcJ_T0097906.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152840097 152868030 - Mbtps2 protein_coding retained_intron MGP_BALBcJ_T0097907.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152841805 152868058 - MGP_BALBcJ_P0097907 Mbtps2 protein_coding protein_coding MGP_BALBcJ_T0097908.1 MGP_BALBcJ_G0036181.1 mouse_genomes_project X 152860590 152868022 - Mbtps2 protein_coding retained_intron MGP_BALBcJ_T0096137.1 MGP_BALBcJ_G0035691.1 mouse_genomes_project X 47902194 47930051 + MGP_BALBcJ_P0096137 Fam122c protein_coding protein_coding MGP_BALBcJ_T0096138.1 MGP_BALBcJ_G0035691.1 mouse_genomes_project X 47902194 47959694 + MGP_BALBcJ_P0096138 Fam122c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096139.1 MGP_BALBcJ_G0035691.1 mouse_genomes_project X 47902203 47959694 + MGP_BALBcJ_P0096139 Fam122c protein_coding protein_coding MGP_BALBcJ_T0100239.1 MGP_BALBcJ_G0038275.1 mouse_genomes_project X 14475282 14475389 - Gm23678 snRNA snRNA MGP_BALBcJ_T0095482.1 MGP_BALBcJ_G0035491.1 mouse_genomes_project X 2259010 2266135 - MGP_BALBcJ_P0095482 protein_coding protein_coding MGP_BALBcJ_T0100281.1 MGP_BALBcJ_G0038317.1 mouse_genomes_project X 104402478 104402645 - Gm23322 snRNA snRNA MGP_BALBcJ_T0016751.1 MGP_BALBcJ_G0014848.1 mouse_genomes_project X 139674844 139675971 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101556.1 MGP_BALBcJ_G0039592.1 mouse_genomes_project X 142102092 142102220 + Snora35 snoRNA snoRNA MGP_BALBcJ_T0016442.1 MGP_BALBcJ_G0014539.1 mouse_genomes_project X 82767490 82768501 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101555.1 MGP_BALBcJ_G0039591.1 mouse_genomes_project X 138528944 138529073 + Gm23325 snoRNA snoRNA MGP_BALBcJ_T0016672.1 MGP_BALBcJ_G0014769.1 mouse_genomes_project X 127899201 127900253 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096849.1 MGP_BALBcJ_G0035878.1 mouse_genomes_project X 89386882 89410792 - MGP_BALBcJ_P0096849 Eif2s3x protein_coding protein_coding MGP_BALBcJ_T0096850.1 MGP_BALBcJ_G0035878.1 mouse_genomes_project X 89397812 89410734 - MGP_BALBcJ_P0096850 Eif2s3x protein_coding protein_coding MGP_BALBcJ_T0096851.1 MGP_BALBcJ_G0035878.1 mouse_genomes_project X 89401054 89410945 - Eif2s3x protein_coding processed_transcript MGP_BALBcJ_T0096732.1 MGP_BALBcJ_G0035831.1 mouse_genomes_project X 70645035 70651221 - MGP_BALBcJ_P0096732 Rab39b protein_coding protein_coding MGP_BALBcJ_T0016255.1 MGP_BALBcJ_G0014352.1 mouse_genomes_project X 38281361 38281644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016535.1 MGP_BALBcJ_G0014632.1 mouse_genomes_project X 98587984 98588437 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096821.1 MGP_BALBcJ_G0035868.1 mouse_genomes_project X 87089896 87090931 - MGP_BALBcJ_P0096821 protein_coding protein_coding MGP_BALBcJ_T0096117.1 MGP_BALBcJ_G0035682.1 mouse_genomes_project X 46372337 46418045 - MGP_BALBcJ_P0096117 Usp26 protein_coding protein_coding MGP_BALBcJ_T0096118.1 MGP_BALBcJ_G0035682.1 mouse_genomes_project X 46372337 46417956 - MGP_BALBcJ_P0096118 Usp26 protein_coding protein_coding MGP_BALBcJ_T0016234.1 MGP_BALBcJ_G0014331.1 mouse_genomes_project X 33935500 33935821 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016224.1 MGP_BALBcJ_G0014321.1 mouse_genomes_project X 31112107 31112401 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098706.1 MGP_BALBcJ_G0036760.1 mouse_genomes_project X 163171664 163171774 + Gm24772 rRNA rRNA MGP_BALBcJ_T0101557.1 MGP_BALBcJ_G0039593.1 mouse_genomes_project X 142574174 142574303 - Gm25107 snoRNA snoRNA MGP_BALBcJ_T0100251.1 MGP_BALBcJ_G0038287.1 mouse_genomes_project X 42962674 42962778 + Gm22528 snRNA snRNA MGP_BALBcJ_T0102850.1 MGP_BALBcJ_G0040665.1 mouse_genomes_project X 32620633 32621643 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011158.1 MGP_BALBcJ_G0009283.1 mouse_genomes_project X 67903487 67903553 + Mir2137 miRNA miRNA MGP_BALBcJ_T0100304.1 MGP_BALBcJ_G0038340.1 mouse_genomes_project X 158082089 158082196 - Gm23901 snRNA snRNA MGP_BALBcJ_T0011183.1 MGP_BALBcJ_G0009308.1 mouse_genomes_project X 129812590 129812691 + Mir7093 miRNA miRNA MGP_BALBcJ_T0095582.1 MGP_BALBcJ_G0035511.1 mouse_genomes_project X 2617677 2632619 - MGP_BALBcJ_P0095582 Glod5 protein_coding protein_coding MGP_BALBcJ_T0016164.1 MGP_BALBcJ_G0014261.1 mouse_genomes_project X 6371609 6371825 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096237.1 MGP_BALBcJ_G0035727.1 mouse_genomes_project X 55357708 55471606 - MGP_BALBcJ_P0096237 Gm7073 protein_coding protein_coding MGP_BALBcJ_T0018645.1 MGP_BALBcJ_G0015734.1 mouse_genomes_project X 147509800 147544163 + 3010001F23Rik processed_transcript processed_transcript MGP_BALBcJ_T0018646.1 MGP_BALBcJ_G0015734.1 mouse_genomes_project X 147510614 147526771 + 3010001F23Rik processed_transcript processed_transcript MGP_BALBcJ_T0016440.1 MGP_BALBcJ_G0014537.1 mouse_genomes_project X 81763390 81763700 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016559.1 MGP_BALBcJ_G0014656.1 mouse_genomes_project X 100734071 100734808 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096817.1 MGP_BALBcJ_G0035864.1 mouse_genomes_project X 86422557 86424218 + MGP_BALBcJ_P0096817 protein_coding protein_coding MGP_BALBcJ_T0100277.1 MGP_BALBcJ_G0038313.1 mouse_genomes_project X 101201112 101201295 + Gm26020 snRNA snRNA MGP_BALBcJ_T0101536.1 MGP_BALBcJ_G0039572.1 mouse_genomes_project X 88325853 88325936 + Gm24123 snoRNA snoRNA MGP_BALBcJ_T0097238.1 MGP_BALBcJ_G0035984.1 mouse_genomes_project X 102821749 102828190 - MGP_BALBcJ_P0097238 Itm2a protein_coding protein_coding MGP_BALBcJ_T0016609.1 MGP_BALBcJ_G0014706.1 mouse_genomes_project X 109331858 109332597 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095635.1 MGP_BALBcJ_G0035524.1 mouse_genomes_project X 3987752 3993725 - MGP_BALBcJ_P0095635 Gm14862 protein_coding protein_coding MGP_BALBcJ_T0096778.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 77832507 78380125 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096779.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 77832540 80126989 + MGP_BALBcJ_P0096779 Dmd protein_coding protein_coding MGP_BALBcJ_T0096780.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 77921654 78622305 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096782.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 78755650 78792099 + Dmd protein_coding processed_transcript MGP_BALBcJ_T0096783.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 78833270 78834272 + Dmd protein_coding processed_transcript MGP_BALBcJ_T0096784.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 78987399 79220305 + Dmd protein_coding processed_transcript MGP_BALBcJ_T0096785.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79515094 80063576 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096786.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79688241 79887952 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096787.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79968222 79975486 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096788.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79968246 80060008 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096789.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79968249 80063574 + Dmd protein_coding retained_intron MGP_BALBcJ_T0096790.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79968340 80125887 + MGP_BALBcJ_P0096790 Dmd protein_coding protein_coding MGP_BALBcJ_T0096791.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 79968340 80123346 + MGP_BALBcJ_P0096791 Dmd protein_coding protein_coding MGP_BALBcJ_T0096792.1 MGP_BALBcJ_G0035851.1 mouse_genomes_project X 80098417 80123685 + Dmd protein_coding processed_transcript MGP_BALBcJ_T0016639.1 MGP_BALBcJ_G0014736.1 mouse_genomes_project X 115125393 115125848 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011097.1 MGP_BALBcJ_G0009222.1 mouse_genomes_project X 2414212 2414333 + Mir1198 miRNA miRNA MGP_BALBcJ_T0011136.1 MGP_BALBcJ_G0009261.1 mouse_genomes_project X 61823421 61823486 - Mir742 miRNA miRNA MGP_BALBcJ_T0096900.1 MGP_BALBcJ_G0035891.1 mouse_genomes_project X 91208273 91241274 - MGP_BALBcJ_P0096900 Las1l protein_coding protein_coding MGP_BALBcJ_T0096901.1 MGP_BALBcJ_G0035891.1 mouse_genomes_project X 91208273 91241274 - MGP_BALBcJ_P0096901 Las1l protein_coding protein_coding MGP_BALBcJ_T0096902.1 MGP_BALBcJ_G0035891.1 mouse_genomes_project X 91214881 91241247 - Las1l protein_coding retained_intron MGP_BALBcJ_T0096903.1 MGP_BALBcJ_G0035891.1 mouse_genomes_project X 91220355 91222124 - Las1l protein_coding processed_transcript MGP_BALBcJ_T0096904.1 MGP_BALBcJ_G0035891.1 mouse_genomes_project X 91220857 91224979 - Las1l protein_coding processed_transcript MGP_BALBcJ_T0096905.1 MGP_BALBcJ_G0035891.1 mouse_genomes_project X 91223355 91241323 - Las1l protein_coding retained_intron MGP_BALBcJ_T0097856.1 MGP_BALBcJ_G0036163.1 mouse_genomes_project X 148744318 148745153 + MGP_BALBcJ_P0097856 Cypt2 protein_coding protein_coding MGP_BALBcJ_T0016339.1 MGP_BALBcJ_G0014436.1 mouse_genomes_project X 57851184 57851448 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016211.1 MGP_BALBcJ_G0014308.1 mouse_genomes_project X 16262329 16263742 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016774.1 MGP_BALBcJ_G0014871.1 mouse_genomes_project X 146058249 146059789 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096254.1 MGP_BALBcJ_G0035739.1 mouse_genomes_project X 62663635 62675411 + MGP_BALBcJ_P0096254 protein_coding protein_coding MGP_BALBcJ_T0016665.1 MGP_BALBcJ_G0014762.1 mouse_genomes_project X 125534814 125535256 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095723.1 MGP_BALBcJ_G0035551.1 mouse_genomes_project X 11647828 11674013 - MGP_BALBcJ_P0095723 Ndp protein_coding protein_coding MGP_BALBcJ_T0100284.1 MGP_BALBcJ_G0038320.1 mouse_genomes_project X 108507045 108507171 - Gm24831 snRNA snRNA MGP_BALBcJ_T0097965.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155770922 155796903 + MGP_BALBcJ_P0097965 Phka2 protein_coding protein_coding MGP_BALBcJ_T0097966.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155771184 155798940 + Phka2 protein_coding retained_intron MGP_BALBcJ_T0097967.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155771184 155863429 + MGP_BALBcJ_P0097967 Phka2 protein_coding protein_coding MGP_BALBcJ_T0097968.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155771215 155825575 + MGP_BALBcJ_P0097968 Phka2 protein_coding protein_coding MGP_BALBcJ_T0097969.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155771562 155856555 + MGP_BALBcJ_P0097969 Phka2 protein_coding protein_coding MGP_BALBcJ_T0097970.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155792474 155808120 + Phka2 protein_coding processed_transcript MGP_BALBcJ_T0097971.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155792484 155808115 + Phka2 protein_coding processed_transcript MGP_BALBcJ_T0097972.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155800023 155856587 + Phka2 protein_coding processed_transcript MGP_BALBcJ_T0097973.1 MGP_BALBcJ_G0036194.1 mouse_genomes_project X 155824406 155829369 + Phka2 protein_coding processed_transcript MGP_BALBcJ_T0016155.1 MGP_BALBcJ_G0014252.1 mouse_genomes_project X 3291417 3292890 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095761.1 MGP_BALBcJ_G0035564.1 mouse_genomes_project X 15383061 15407411 + MGP_BALBcJ_P0095761 Uba1 protein_coding protein_coding MGP_BALBcJ_T0095762.1 MGP_BALBcJ_G0035564.1 mouse_genomes_project X 15383156 15394560 + Uba1 protein_coding processed_transcript MGP_BALBcJ_T0095763.1 MGP_BALBcJ_G0035564.1 mouse_genomes_project X 15384162 15393474 + Uba1 protein_coding processed_transcript MGP_BALBcJ_T0095764.1 MGP_BALBcJ_G0035564.1 mouse_genomes_project X 15387154 15407411 + MGP_BALBcJ_P0095764 Uba1 protein_coding protein_coding MGP_BALBcJ_T0095765.1 MGP_BALBcJ_G0035564.1 mouse_genomes_project X 15402333 15405432 + Uba1 protein_coding processed_transcript MGP_BALBcJ_T0095766.1 MGP_BALBcJ_G0035564.1 mouse_genomes_project X 15404826 15406437 + Uba1 protein_coding processed_transcript MGP_BALBcJ_T0101568.1 MGP_BALBcJ_G0039604.1 mouse_genomes_project X 162625703 162625821 - Gm26368 snoRNA snoRNA MGP_BALBcJ_T0016383.1 MGP_BALBcJ_G0014480.1 mouse_genomes_project X 69521996 69522384 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095998.1 MGP_BALBcJ_G0035645.1 mouse_genomes_project X 37189801 37191635 + MGP_BALBcJ_P0095998 Gm43337 protein_coding protein_coding MGP_BALBcJ_T0009427.1 MGP_BALBcJ_G0007554.1 mouse_genomes_project X 164738333 164765676 + Gm15245 lincRNA lincRNA MGP_BALBcJ_T0009367.1 MGP_BALBcJ_G0007517.1 mouse_genomes_project X 67893082 67893604 + Gm14684 lincRNA lincRNA MGP_BALBcJ_T0016379.1 MGP_BALBcJ_G0014476.1 mouse_genomes_project X 69010217 69011018 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016143.1 MGP_BALBcJ_G0014240.1 mouse_genomes_project X 1732518 1732949 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016204.1 MGP_BALBcJ_G0014301.1 mouse_genomes_project X 15111012 15112084 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016792.1 MGP_BALBcJ_G0014889.1 mouse_genomes_project X 149622693 149623340 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097881.1 MGP_BALBcJ_G0036175.1 mouse_genomes_project X 150538187 150539326 + Acot9 protein_coding processed_transcript MGP_BALBcJ_T0097882.1 MGP_BALBcJ_G0036175.1 mouse_genomes_project X 150538187 150574473 + MGP_BALBcJ_P0097882 Acot9 protein_coding protein_coding MGP_BALBcJ_T0097883.1 MGP_BALBcJ_G0036175.1 mouse_genomes_project X 150538249 150574465 + MGP_BALBcJ_P0097883 Acot9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097884.1 MGP_BALBcJ_G0036175.1 mouse_genomes_project X 150570661 150573732 + Acot9 protein_coding retained_intron MGP_BALBcJ_T0016229.1 MGP_BALBcJ_G0014326.1 mouse_genomes_project X 33413167 33413739 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100294.1 MGP_BALBcJ_G0038330.1 mouse_genomes_project X 140259731 140259874 + Gm25097 snRNA snRNA MGP_BALBcJ_T0016455.1 MGP_BALBcJ_G0014552.1 mouse_genomes_project X 84456695 84457416 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096958.1 MGP_BALBcJ_G0035905.1 mouse_genomes_project X 95075595 95103602 + MGP_BALBcJ_P0096958 Tmem28 protein_coding protein_coding MGP_BALBcJ_T0016147.1 MGP_BALBcJ_G0014244.1 mouse_genomes_project X 2283839 2284243 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097888.1 MGP_BALBcJ_G0036177.1 mouse_genomes_project X 150856288 150906107 - MGP_BALBcJ_P0097888 Ptchd1 protein_coding protein_coding MGP_BALBcJ_T0097889.1 MGP_BALBcJ_G0036177.1 mouse_genomes_project X 150856374 150905900 - MGP_BALBcJ_P0097889 Ptchd1 protein_coding protein_coding MGP_BALBcJ_T0097890.1 MGP_BALBcJ_G0036177.1 mouse_genomes_project X 150869596 150906596 - Ptchd1 protein_coding processed_transcript MGP_BALBcJ_T0018649.1 MGP_BALBcJ_G0015737.1 mouse_genomes_project X 164618041 164657318 + Gm15246 processed_transcript processed_transcript MGP_BALBcJ_T0018650.1 MGP_BALBcJ_G0015737.1 mouse_genomes_project X 164618041 164664303 + Gm15246 processed_transcript processed_transcript MGP_BALBcJ_T0097816.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147283547 147364767 + MGP_BALBcJ_P0097816 Iqsec2 protein_coding protein_coding MGP_BALBcJ_T0097817.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147283551 147364768 + MGP_BALBcJ_P0097817 Iqsec2 protein_coding protein_coding MGP_BALBcJ_T0097818.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147283752 147333859 + MGP_BALBcJ_P0097818 Iqsec2 protein_coding unknown_likely_coding MGP_BALBcJ_T0097819.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147318252 147343265 + Iqsec2 protein_coding processed_transcript MGP_BALBcJ_T0097820.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147318252 147333848 + Iqsec2 protein_coding processed_transcript MGP_BALBcJ_T0097821.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147318252 147333848 + Iqsec2 protein_coding processed_transcript MGP_BALBcJ_T0097822.1 MGP_BALBcJ_G0036150.1 mouse_genomes_project X 147342271 147363419 + MGP_BALBcJ_P0097822 Iqsec2 protein_coding protein_coding MGP_BALBcJ_T0016418.1 MGP_BALBcJ_G0014515.1 mouse_genomes_project X 75384824 75385509 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096740.1 MGP_BALBcJ_G0035834.1 mouse_genomes_project X 71526712 71531335 + MGP_BALBcJ_P0096740 Cldn34b4 protein_coding protein_coding MGP_BALBcJ_T0096741.1 MGP_BALBcJ_G0035834.1 mouse_genomes_project X 71526814 71531244 + MGP_BALBcJ_P0096741 Cldn34b4 protein_coding protein_coding MGP_BALBcJ_T0097503.1 MGP_BALBcJ_G0036077.1 mouse_genomes_project X 132136620 132137672 + MGP_BALBcJ_P0097503 H2bfm protein_coding protein_coding MGP_BALBcJ_T0011750.1 MGP_BALBcJ_G0009875.1 mouse_genomes_project X 99010919 99011124 + Gm27321 misc_RNA misc_RNA MGP_BALBcJ_T0018643.1 MGP_BALBcJ_G0015733.1 mouse_genomes_project X 134460201 134590321 - Platr21 processed_transcript processed_transcript MGP_BALBcJ_T0018644.1 MGP_BALBcJ_G0015733.1 mouse_genomes_project X 134581041 134591289 - Platr21 processed_transcript processed_transcript MGP_BALBcJ_T0016447.1 MGP_BALBcJ_G0014544.1 mouse_genomes_project X 83617606 83618077 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100299.1 MGP_BALBcJ_G0038335.1 mouse_genomes_project X 148761841 148761948 - Gm25793 snRNA snRNA MGP_BALBcJ_T0096010.1 MGP_BALBcJ_G0035648.1 mouse_genomes_project X 38282760 38285133 + MGP_BALBcJ_P0096010 Gm362 protein_coding protein_coding MGP_BALBcJ_T0005562.1 MGP_BALBcJ_G0004689.1 mouse_genomes_project X 55490365 55753351 + antisense antisense MGP_BALBcJ_T0005578.1 MGP_BALBcJ_G0004703.1 mouse_genomes_project X 97057276 97062601 - antisense antisense MGP_BALBcJ_T0016762.1 MGP_BALBcJ_G0014859.1 mouse_genomes_project X 141166866 141167950 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096244.1 MGP_BALBcJ_G0035733.1 mouse_genomes_project X 59191787 59192572 - MGP_BALBcJ_P0096244 Gm6760 protein_coding protein_coding MGP_BALBcJ_T0097556.1 MGP_BALBcJ_G0036094.1 mouse_genomes_project X 134954898 134955895 - MGP_BALBcJ_P0097556 Gm15013 protein_coding protein_coding MGP_BALBcJ_T0097557.1 MGP_BALBcJ_G0036094.1 mouse_genomes_project X 134954980 134955781 - Gm15013 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0097320.1 MGP_BALBcJ_G0036016.1 mouse_genomes_project X 113500999 113502060 - MGP_BALBcJ_P0097320 Tgif2lx2 protein_coding protein_coding MGP_BALBcJ_T0009400.1 MGP_BALBcJ_G0007536.1 mouse_genomes_project X 124035550 124038400 + 4930558G05Rik lincRNA lincRNA MGP_BALBcJ_T0016696.1 MGP_BALBcJ_G0014793.1 mouse_genomes_project X 132139152 132140274 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100287.1 MGP_BALBcJ_G0038323.1 mouse_genomes_project X 122279958 122280063 + Gm22139 snRNA snRNA MGP_BALBcJ_T0097268.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106620948 106704846 - MGP_BALBcJ_P0097268 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097269.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106620948 106704694 - MGP_BALBcJ_P0097269 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097270.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106620949 106731489 - MGP_BALBcJ_P0097270 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097271.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106620949 106704846 - MGP_BALBcJ_P0097271 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097272.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106622535 106704756 - MGP_BALBcJ_P0097272 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097273.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106674941 106731468 - MGP_BALBcJ_P0097273 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097274.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106674973 106705024 - MGP_BALBcJ_P0097274 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097275.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106675880 106777117 - MGP_BALBcJ_P0097275 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097276.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106680516 106704290 - MGP_BALBcJ_P0097276 Rps6ka6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097277.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106680593 106783945 - MGP_BALBcJ_P0097277 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097278.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106687680 106783957 - MGP_BALBcJ_P0097278 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0097279.1 MGP_BALBcJ_G0035998.1 mouse_genomes_project X 106691819 106782339 - MGP_BALBcJ_P0097279 Rps6ka6 protein_coding protein_coding MGP_BALBcJ_T0095923.1 MGP_BALBcJ_G0035628.1 mouse_genomes_project X 32780695 32789243 - MGP_BALBcJ_P0095923 Rhox11 protein_coding protein_coding MGP_BALBcJ_T0097244.1 MGP_BALBcJ_G0035986.1 mouse_genomes_project X 103209170 103242273 - MGP_BALBcJ_P0097244 2610002M06Rik protein_coding protein_coding MGP_BALBcJ_T0097245.1 MGP_BALBcJ_G0035986.1 mouse_genomes_project X 103214256 103220112 - 2610002M06Rik protein_coding retained_intron MGP_BALBcJ_T0096381.1 MGP_BALBcJ_G0035779.1 mouse_genomes_project X 68640133 68644229 + MGP_BALBcJ_P0096381 Dusp9 protein_coding protein_coding MGP_BALBcJ_T0096036.1 MGP_BALBcJ_G0035657.1 mouse_genomes_project X 42804973 42820106 + MGP_BALBcJ_P0096036 Sash3 protein_coding protein_coding MGP_BALBcJ_T0016765.1 MGP_BALBcJ_G0014862.1 mouse_genomes_project X 141698079 141699287 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016777.1 MGP_BALBcJ_G0014874.1 mouse_genomes_project X 146307687 146308072 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097917.1 MGP_BALBcJ_G0036184.1 mouse_genomes_project X 153080401 153082336 + MGP_BALBcJ_P0097917 Klhl34 protein_coding protein_coding MGP_BALBcJ_T0016342.1 MGP_BALBcJ_G0014439.1 mouse_genomes_project X 58402037 58402339 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016807.1 MGP_BALBcJ_G0014904.1 mouse_genomes_project X 152874489 152874624 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095900.1 MGP_BALBcJ_G0035617.1 mouse_genomes_project X 32305085 32313883 + MGP_BALBcJ_P0095900 protein_coding protein_coding MGP_BALBcJ_T0095810.1 MGP_BALBcJ_G0035575.1 mouse_genomes_project X 15835635 15845691 - MGP_BALBcJ_P0095810 Zfp300 protein_coding protein_coding MGP_BALBcJ_T0095811.1 MGP_BALBcJ_G0035575.1 mouse_genomes_project X 15840403 15845448 - Zfp300 protein_coding retained_intron MGP_BALBcJ_T0095812.1 MGP_BALBcJ_G0035575.1 mouse_genomes_project X 15840711 15845989 - Zfp300 protein_coding processed_transcript MGP_BALBcJ_T0018569.1 MGP_BALBcJ_G0015711.1 mouse_genomes_project X 7826550 7829745 + 5730405O15Rik processed_transcript processed_transcript MGP_BALBcJ_T0018570.1 MGP_BALBcJ_G0015711.1 mouse_genomes_project X 7826586 7829832 + 5730405O15Rik processed_transcript processed_transcript MGP_BALBcJ_T0016141.1 MGP_BALBcJ_G0014238.1 mouse_genomes_project X 687070 687580 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098776.1 MGP_BALBcJ_G0036830.1 mouse_genomes_project X 30560501 30560776 + Gm25624 scaRNA scaRNA MGP_BALBcJ_T0016428.1 MGP_BALBcJ_G0014525.1 mouse_genomes_project X 78969524 78969956 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016852.1 MGP_BALBcJ_G0014949.1 mouse_genomes_project X 161752715 161754113 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101793.1 MGP_BALBcJ_G0039733.1 mouse_genomes_project X 18104790 18105348 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0095526.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392592 2427677 + MGP_BALBcJ_P0095526 Gripap1 protein_coding protein_coding MGP_BALBcJ_T0095527.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392821 2419593 + MGP_BALBcJ_P0095527 Gripap1 protein_coding protein_coding MGP_BALBcJ_T0095528.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392822 2427673 + MGP_BALBcJ_P0095528 Gripap1 protein_coding protein_coding MGP_BALBcJ_T0095529.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392833 2397372 + Gripap1 protein_coding retained_intron MGP_BALBcJ_T0095530.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392835 2427673 + MGP_BALBcJ_P0095530 Gripap1 protein_coding protein_coding MGP_BALBcJ_T0095531.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392839 2419593 + MGP_BALBcJ_P0095531 Gripap1 protein_coding protein_coding MGP_BALBcJ_T0095532.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2392845 2427066 + Gripap1 protein_coding processed_transcript MGP_BALBcJ_T0095533.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2405539 2417941 + Gripap1 protein_coding retained_intron MGP_BALBcJ_T0095534.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2417372 2417921 + Gripap1 protein_coding processed_transcript MGP_BALBcJ_T0095535.1 MGP_BALBcJ_G0035498.1 mouse_genomes_project X 2426028 2427673 + Gripap1 protein_coding retained_intron MGP_BALBcJ_T0102879.1 MGP_BALBcJ_G0040694.1 mouse_genomes_project X 98022600 98103823 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016256.1 MGP_BALBcJ_G0014353.1 mouse_genomes_project X 38396589 38397307 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100260.1 MGP_BALBcJ_G0038296.1 mouse_genomes_project X 56872078 56872185 + Gm25412 snRNA snRNA MGP_BALBcJ_T0098089.1 MGP_BALBcJ_G0036226.1 mouse_genomes_project X 161437897 161440277 + MGP_BALBcJ_P0098089 Gemin8 protein_coding protein_coding MGP_BALBcJ_T0098090.1 MGP_BALBcJ_G0036226.1 mouse_genomes_project X 161437919 161448832 + MGP_BALBcJ_P0098090 Gemin8 protein_coding protein_coding MGP_BALBcJ_T0097136.1 MGP_BALBcJ_G0035950.1 mouse_genomes_project X 98256266 98257006 + MGP_BALBcJ_P0097136 1700011M02Rik protein_coding protein_coding MGP_BALBcJ_T0011739.1 MGP_BALBcJ_G0009864.1 mouse_genomes_project X 63633695 63633823 + Gm27838 misc_RNA misc_RNA MGP_BALBcJ_T0097293.1 MGP_BALBcJ_G0036005.1 mouse_genomes_project X 107720951 107776980 + MGP_BALBcJ_P0097293 2010106E10Rik protein_coding protein_coding MGP_BALBcJ_T0097294.1 MGP_BALBcJ_G0036005.1 mouse_genomes_project X 107720951 107776990 + MGP_BALBcJ_P0097294 2010106E10Rik protein_coding protein_coding MGP_BALBcJ_T0016757.1 MGP_BALBcJ_G0014854.1 mouse_genomes_project X 140842223 140842681 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016798.1 MGP_BALBcJ_G0014895.1 mouse_genomes_project X 150748671 150749241 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016395.1 MGP_BALBcJ_G0014492.1 mouse_genomes_project X 71494278 71494582 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016320.1 MGP_BALBcJ_G0014417.1 mouse_genomes_project X 55648263 55649057 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016421.1 MGP_BALBcJ_G0014518.1 mouse_genomes_project X 75888641 75888774 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096722.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70473760 70514725 + MGP_BALBcJ_P0096722 Brcc3 protein_coding protein_coding MGP_BALBcJ_T0096723.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70473829 70512742 + MGP_BALBcJ_P0096723 Brcc3 protein_coding protein_coding MGP_BALBcJ_T0096724.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70473832 70511489 + Brcc3 protein_coding retained_intron MGP_BALBcJ_T0096725.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70473842 70512465 + MGP_BALBcJ_P0096725 Brcc3 protein_coding protein_coding MGP_BALBcJ_T0096726.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70473848 70494472 + MGP_BALBcJ_P0096726 Brcc3 protein_coding protein_coding MGP_BALBcJ_T0096727.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70474439 70491956 + MGP_BALBcJ_P0096727 Brcc3 protein_coding protein_coding MGP_BALBcJ_T0096728.1 MGP_BALBcJ_G0035829.1 mouse_genomes_project X 70490458 70511981 + Brcc3 protein_coding retained_intron MGP_BALBcJ_T0097383.1 MGP_BALBcJ_G0036038.1 mouse_genomes_project X 129319886 129330871 + MGP_BALBcJ_P0097383 Tmem35a protein_coding protein_coding MGP_BALBcJ_T0097606.1 MGP_BALBcJ_G0036107.1 mouse_genomes_project X 136195724 136204008 - MGP_BALBcJ_P0097606 Psmd10 protein_coding protein_coding MGP_BALBcJ_T0096478.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68926086 68934904 - MGP_BALBcJ_P0096478 Renbp protein_coding protein_coding MGP_BALBcJ_T0096479.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68926086 68934846 - MGP_BALBcJ_P0096479 Renbp protein_coding protein_coding MGP_BALBcJ_T0096480.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68926087 68930407 - Renbp protein_coding retained_intron MGP_BALBcJ_T0096481.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68926088 68934871 - Renbp protein_coding retained_intron MGP_BALBcJ_T0096482.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68926104 68934810 - MGP_BALBcJ_P0096482 Renbp protein_coding protein_coding MGP_BALBcJ_T0096483.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68929268 68933183 - Renbp protein_coding processed_transcript MGP_BALBcJ_T0096484.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68930272 68932143 - Renbp protein_coding retained_intron MGP_BALBcJ_T0096485.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68932301 68934795 - Renbp protein_coding retained_intron MGP_BALBcJ_T0096486.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68933195 68934799 - MGP_BALBcJ_P0096486 Renbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096487.1 MGP_BALBcJ_G0035793.1 mouse_genomes_project X 68933642 68934806 - Renbp protein_coding retained_intron MGP_BALBcJ_T0016472.1 MGP_BALBcJ_G0014569.1 mouse_genomes_project X 88696435 88699172 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016214.1 MGP_BALBcJ_G0014311.1 mouse_genomes_project X 16988144 16990113 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100272.1 MGP_BALBcJ_G0038308.1 mouse_genomes_project X 96245711 96245775 + Gm27510 snRNA snRNA MGP_BALBcJ_T0002476.1 MGP_BALBcJ_G0002385.1 mouse_genomes_project X 123335834 123336899 + TEC TEC MGP_BALBcJ_T0018651.1 MGP_BALBcJ_G0015738.1 mouse_genomes_project X 165260971 165264860 - G530011O06Rik processed_transcript processed_transcript MGP_BALBcJ_T0095477.1 MGP_BALBcJ_G0035490.1 mouse_genomes_project X 2248337 2258971 + MGP_BALBcJ_P0095477 Prickle3 protein_coding protein_coding MGP_BALBcJ_T0095478.1 MGP_BALBcJ_G0035490.1 mouse_genomes_project X 2248549 2252206 + Prickle3 protein_coding retained_intron MGP_BALBcJ_T0095479.1 MGP_BALBcJ_G0035490.1 mouse_genomes_project X 2249610 2259235 + MGP_BALBcJ_P0095479 Prickle3 protein_coding protein_coding MGP_BALBcJ_T0095480.1 MGP_BALBcJ_G0035490.1 mouse_genomes_project X 2253838 2258971 + Prickle3 protein_coding retained_intron MGP_BALBcJ_T0095481.1 MGP_BALBcJ_G0035490.1 mouse_genomes_project X 2257135 2258175 + Prickle3 protein_coding retained_intron MGP_BALBcJ_T0016292.1 MGP_BALBcJ_G0014389.1 mouse_genomes_project X 48048662 48049196 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095852.1 MGP_BALBcJ_G0035592.1 mouse_genomes_project X 31338077 31375316 - MGP_BALBcJ_P0095852 protein_coding unknown_likely_coding MGP_BALBcJ_T0095853.1 MGP_BALBcJ_G0035592.1 mouse_genomes_project X 31341782 31375223 - MGP_BALBcJ_P0095853 protein_coding protein_coding MGP_BALBcJ_T0016149.1 MGP_BALBcJ_G0014246.1 mouse_genomes_project X 2562443 2563156 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016526.1 MGP_BALBcJ_G0014623.1 mouse_genomes_project X 97490026 97490593 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095621.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2860250 2874240 - MGP_BALBcJ_P0095621 Ftsj1 protein_coding protein_coding MGP_BALBcJ_T0095622.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2862163 2874229 - MGP_BALBcJ_P0095622 Ftsj1 protein_coding protein_coding MGP_BALBcJ_T0095623.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2862163 2874144 - MGP_BALBcJ_P0095623 Ftsj1 protein_coding protein_coding MGP_BALBcJ_T0095624.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2866449 2874042 - Ftsj1 protein_coding retained_intron MGP_BALBcJ_T0095625.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2866746 2868190 - MGP_BALBcJ_P0095625 Ftsj1 protein_coding protein_coding MGP_BALBcJ_T0095626.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2866777 2867637 - Ftsj1 protein_coding processed_transcript MGP_BALBcJ_T0095627.1 MGP_BALBcJ_G0035519.1 mouse_genomes_project X 2870355 2874197 - Ftsj1 protein_coding retained_intron MGP_BALBcJ_T0016488.1 MGP_BALBcJ_G0014585.1 mouse_genomes_project X 90006241 90006941 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016769.1 MGP_BALBcJ_G0014866.1 mouse_genomes_project X 145502577 145502781 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097019.1 MGP_BALBcJ_G0035921.1 mouse_genomes_project X 96498350 96504679 + MGP_BALBcJ_P0097019 Foxo4 protein_coding protein_coding MGP_BALBcJ_T0097020.1 MGP_BALBcJ_G0035921.1 mouse_genomes_project X 96498389 96500258 + Foxo4 protein_coding processed_transcript MGP_BALBcJ_T0097021.1 MGP_BALBcJ_G0035921.1 mouse_genomes_project X 96498643 96503056 + MGP_BALBcJ_P0097021 Foxo4 protein_coding protein_coding MGP_BALBcJ_T0096125.1 MGP_BALBcJ_G0035687.1 mouse_genomes_project X 47535859 47580887 + MGP_BALBcJ_P0096125 Phf6 protein_coding protein_coding MGP_BALBcJ_T0096126.1 MGP_BALBcJ_G0035687.1 mouse_genomes_project X 47535862 47572520 + MGP_BALBcJ_P0096126 Phf6 protein_coding protein_coding MGP_BALBcJ_T0096127.1 MGP_BALBcJ_G0035687.1 mouse_genomes_project X 47548583 47564624 + Phf6 protein_coding processed_transcript MGP_BALBcJ_T0096128.1 MGP_BALBcJ_G0035687.1 mouse_genomes_project X 47548585 47564643 + Phf6 protein_coding processed_transcript MGP_BALBcJ_T0097484.1 MGP_BALBcJ_G0036068.1 mouse_genomes_project X 131609721 131630072 - MGP_BALBcJ_P0097484 protein_coding protein_coding MGP_BALBcJ_T0016520.1 MGP_BALBcJ_G0014617.1 mouse_genomes_project X 97035390 97035918 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016510.1 MGP_BALBcJ_G0014607.1 mouse_genomes_project X 95053091 95054284 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096165.1 MGP_BALBcJ_G0035709.1 mouse_genomes_project X 51570448 51595476 + MGP_BALBcJ_P0096165 Slc9a6 protein_coding protein_coding MGP_BALBcJ_T0096166.1 MGP_BALBcJ_G0035709.1 mouse_genomes_project X 51570466 51624892 + MGP_BALBcJ_P0096166 Slc9a6 protein_coding protein_coding MGP_BALBcJ_T0096167.1 MGP_BALBcJ_G0035709.1 mouse_genomes_project X 51570508 51624503 + MGP_BALBcJ_P0096167 Slc9a6 protein_coding protein_coding MGP_BALBcJ_T0096168.1 MGP_BALBcJ_G0035709.1 mouse_genomes_project X 51618904 51624491 + Slc9a6 protein_coding retained_intron MGP_BALBcJ_T0016555.1 MGP_BALBcJ_G0014652.1 mouse_genomes_project X 100352380 100353011 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101813.1 MGP_BALBcJ_G0039749.1 mouse_genomes_project X 164664301 164666068 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0097370.1 MGP_BALBcJ_G0036034.1 mouse_genomes_project X 129105401 129133623 - MGP_BALBcJ_P0097370 Nox1 protein_coding protein_coding MGP_BALBcJ_T0097371.1 MGP_BALBcJ_G0036034.1 mouse_genomes_project X 129106032 129133534 - MGP_BALBcJ_P0097371 Nox1 protein_coding protein_coding MGP_BALBcJ_T0097372.1 MGP_BALBcJ_G0036034.1 mouse_genomes_project X 129106124 129133477 - MGP_BALBcJ_P0097372 Nox1 protein_coding protein_coding MGP_BALBcJ_T0097373.1 MGP_BALBcJ_G0036034.1 mouse_genomes_project X 129129417 129244442 - MGP_BALBcJ_P0097373 Nox1 protein_coding protein_coding MGP_BALBcJ_T0097374.1 MGP_BALBcJ_G0036034.1 mouse_genomes_project X 129129417 129159018 - MGP_BALBcJ_P0097374 Nox1 protein_coding protein_coding MGP_BALBcJ_T0016587.1 MGP_BALBcJ_G0014684.1 mouse_genomes_project X 105299034 105300586 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097638.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138635015 138921500 + MGP_BALBcJ_P0097638 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097639.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138635122 138890127 + MGP_BALBcJ_P0097639 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097640.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138785493 138921500 + MGP_BALBcJ_P0097640 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097641.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138785576 138815236 + MGP_BALBcJ_P0097641 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097642.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138785594 138838164 + MGP_BALBcJ_P0097642 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097643.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138785729 138857482 + MGP_BALBcJ_P0097643 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097644.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138785782 138921500 + MGP_BALBcJ_P0097644 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097645.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138786948 138921500 + MGP_BALBcJ_P0097645 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097646.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138786948 138921500 + MGP_BALBcJ_P0097646 Pak3 protein_coding protein_coding MGP_BALBcJ_T0097647.1 MGP_BALBcJ_G0036123.1 mouse_genomes_project X 138815137 138921504 + MGP_BALBcJ_P0097647 Pak3 protein_coding protein_coding MGP_BALBcJ_T0096745.1 MGP_BALBcJ_G0035837.1 mouse_genomes_project X 72812231 72847411 - MGP_BALBcJ_P0096745 Prkx protein_coding protein_coding MGP_BALBcJ_T0096746.1 MGP_BALBcJ_G0035837.1 mouse_genomes_project X 72822294 72847015 - MGP_BALBcJ_P0096746 Prkx protein_coding protein_coding MGP_BALBcJ_T0016675.1 MGP_BALBcJ_G0014772.1 mouse_genomes_project X 128234002 128235036 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018565.1 MGP_BALBcJ_G0015708.1 mouse_genomes_project X 2311937 2320940 + processed_transcript processed_transcript MGP_BALBcJ_T0096212.1 MGP_BALBcJ_G0035721.1 mouse_genomes_project X 52981171 52990363 + MGP_BALBcJ_P0096212 Zic3 protein_coding protein_coding MGP_BALBcJ_T0096213.1 MGP_BALBcJ_G0035721.1 mouse_genomes_project X 52989557 52995474 + MGP_BALBcJ_P0096213 Zic3 protein_coding protein_coding MGP_BALBcJ_T0096214.1 MGP_BALBcJ_G0035721.1 mouse_genomes_project X 52989913 52995474 + MGP_BALBcJ_P0096214 Zic3 protein_coding protein_coding MGP_BALBcJ_T0096215.1 MGP_BALBcJ_G0035721.1 mouse_genomes_project X 52989924 53000982 + MGP_BALBcJ_P0096215 Zic3 protein_coding protein_coding MGP_BALBcJ_T0097216.1 MGP_BALBcJ_G0035977.1 mouse_genomes_project X 102015354 102044885 - MGP_BALBcJ_P0097216 Cysltr1 protein_coding protein_coding MGP_BALBcJ_T0097217.1 MGP_BALBcJ_G0035977.1 mouse_genomes_project X 102018824 102021866 - MGP_BALBcJ_P0097217 Cysltr1 protein_coding protein_coding MGP_BALBcJ_T0005542.1 MGP_BALBcJ_G0004676.1 mouse_genomes_project X 2165404 2172865 + Ppp1r3fos antisense antisense MGP_BALBcJ_T0005543.1 MGP_BALBcJ_G0004676.1 mouse_genomes_project X 2166296 2170266 + Ppp1r3fos antisense antisense MGP_BALBcJ_T0016700.1 MGP_BALBcJ_G0014797.1 mouse_genomes_project X 132355107 132355705 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095815.1 MGP_BALBcJ_G0035577.1 mouse_genomes_project X 15929913 15932036 - MGP_BALBcJ_P0095815 Gm21876 protein_coding protein_coding MGP_BALBcJ_T0097143.1 MGP_BALBcJ_G0035957.1 mouse_genomes_project X 99017639 99018724 + MGP_BALBcJ_P0097143 Zcchc13 protein_coding protein_coding MGP_BALBcJ_T0097071.1 MGP_BALBcJ_G0035930.1 mouse_genomes_project X 96710447 96714901 + MGP_BALBcJ_P0097071 Itgb1bp2 protein_coding protein_coding MGP_BALBcJ_T0097072.1 MGP_BALBcJ_G0035930.1 mouse_genomes_project X 96713470 96714504 + Itgb1bp2 protein_coding retained_intron MGP_BALBcJ_T0097896.1 MGP_BALBcJ_G0036180.1 mouse_genomes_project X 152706798 152758336 - MGP_BALBcJ_P0097896 Sms protein_coding protein_coding MGP_BALBcJ_T0097897.1 MGP_BALBcJ_G0036180.1 mouse_genomes_project X 152719328 152724191 - Sms protein_coding retained_intron MGP_BALBcJ_T0097898.1 MGP_BALBcJ_G0036180.1 mouse_genomes_project X 152722203 152758093 - Sms protein_coding retained_intron MGP_BALBcJ_T0097899.1 MGP_BALBcJ_G0036180.1 mouse_genomes_project X 152729191 152757421 - MGP_BALBcJ_P0097899 Sms protein_coding protein_coding MGP_BALBcJ_T0097295.1 MGP_BALBcJ_G0036006.1 mouse_genomes_project X 107812728 107838209 + Zfp711 protein_coding retained_intron MGP_BALBcJ_T0097296.1 MGP_BALBcJ_G0036006.1 mouse_genomes_project X 107812728 107846273 + MGP_BALBcJ_P0097296 Zfp711 protein_coding protein_coding MGP_BALBcJ_T0097297.1 MGP_BALBcJ_G0036006.1 mouse_genomes_project X 107812936 107846282 + MGP_BALBcJ_P0097297 Zfp711 protein_coding unknown_likely_coding MGP_BALBcJ_T0097298.1 MGP_BALBcJ_G0036006.1 mouse_genomes_project X 107827444 107843121 + MGP_BALBcJ_P0097298 Zfp711 protein_coding protein_coding MGP_BALBcJ_T0102860.1 MGP_BALBcJ_G0040675.1 mouse_genomes_project X 68246266 68259424 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0096014.1 MGP_BALBcJ_G0035651.1 mouse_genomes_project X 39826816 39828704 + MGP_BALBcJ_P0096014 Prr32 protein_coding protein_coding MGP_BALBcJ_T0011107.1 MGP_BALBcJ_G0009232.1 mouse_genomes_project X 32918986 32919066 + Mir3110 miRNA miRNA MGP_BALBcJ_T0016833.1 MGP_BALBcJ_G0014930.1 mouse_genomes_project X 157821186 157821640 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016657.1 MGP_BALBcJ_G0014754.1 mouse_genomes_project X 123016932 123019717 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102884.1 MGP_BALBcJ_G0040699.1 mouse_genomes_project X 130593623 130677359 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097626.1 MGP_BALBcJ_G0036118.1 mouse_genomes_project X 137449416 137524231 - MGP_BALBcJ_P0097626 Acsl4 protein_coding protein_coding MGP_BALBcJ_T0097627.1 MGP_BALBcJ_G0036118.1 mouse_genomes_project X 137452093 137459438 - Acsl4 protein_coding processed_transcript MGP_BALBcJ_T0097628.1 MGP_BALBcJ_G0036118.1 mouse_genomes_project X 137452099 137524213 - MGP_BALBcJ_P0097628 Acsl4 protein_coding protein_coding MGP_BALBcJ_T0016788.1 MGP_BALBcJ_G0014885.1 mouse_genomes_project X 148685946 148686331 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011159.1 MGP_BALBcJ_G0009284.1 mouse_genomes_project X 69027616 69027687 - Mir5132 miRNA miRNA MGP_BALBcJ_T0016752.1 MGP_BALBcJ_G0014849.1 mouse_genomes_project X 139971588 139972189 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097754.1 MGP_BALBcJ_G0036141.1 mouse_genomes_project X 146180061 146223168 + MGP_BALBcJ_P0097754 Fgd1 protein_coding protein_coding MGP_BALBcJ_T0097755.1 MGP_BALBcJ_G0036141.1 mouse_genomes_project X 146181081 146223168 + MGP_BALBcJ_P0097755 Fgd1 protein_coding protein_coding MGP_BALBcJ_T0097756.1 MGP_BALBcJ_G0036141.1 mouse_genomes_project X 146201507 146203793 + Fgd1 protein_coding retained_intron MGP_BALBcJ_T0097757.1 MGP_BALBcJ_G0036141.1 mouse_genomes_project X 146219756 146220828 + Fgd1 protein_coding retained_intron MGP_BALBcJ_T0016317.1 MGP_BALBcJ_G0014414.1 mouse_genomes_project X 55480347 55481178 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009350.1 MGP_BALBcJ_G0007504.1 mouse_genomes_project X 16073300 16095923 - Gm6938 lincRNA lincRNA MGP_BALBcJ_T0097453.1 MGP_BALBcJ_G0036057.1 mouse_genomes_project X 130880201 130900429 + Gprasp1 protein_coding processed_transcript MGP_BALBcJ_T0097455.1 MGP_BALBcJ_G0036057.1 mouse_genomes_project X 130880201 130942455 + MGP_BALBcJ_P0097455 Gprasp1 protein_coding protein_coding MGP_BALBcJ_T0097456.1 MGP_BALBcJ_G0036057.1 mouse_genomes_project X 130880201 130942455 + MGP_BALBcJ_P0097456 Gprasp1 protein_coding protein_coding MGP_BALBcJ_T0097457.1 MGP_BALBcJ_G0036057.1 mouse_genomes_project X 130880201 130942455 + MGP_BALBcJ_P0097457 Gprasp1 protein_coding protein_coding MGP_BALBcJ_T0097458.1 MGP_BALBcJ_G0036057.1 mouse_genomes_project X 130880203 130918177 + Gprasp1 protein_coding processed_transcript MGP_BALBcJ_T0097461.1 MGP_BALBcJ_G0036057.1 mouse_genomes_project X 130935064 130942447 + MGP_BALBcJ_P0097461 Gprasp1 protein_coding protein_coding MGP_BALBcJ_T0016422.1 MGP_BALBcJ_G0014519.1 mouse_genomes_project X 76188663 76189394 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098698.1 MGP_BALBcJ_G0036752.1 mouse_genomes_project X 146907259 146907378 + n-R5s13 rRNA rRNA MGP_BALBcJ_T0096616.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69340286 69343464 + Plxna3 protein_coding processed_transcript MGP_BALBcJ_T0096617.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69340286 69355909 + MGP_BALBcJ_P0096617 Plxna3 protein_coding protein_coding MGP_BALBcJ_T0096618.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69343677 69355903 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096619.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69344966 69345924 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096620.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69345546 69347059 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096621.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69346452 69347556 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096622.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69349485 69350536 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096623.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69349568 69350379 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096624.1 MGP_BALBcJ_G0035808.1 mouse_genomes_project X 69352806 69355165 + Plxna3 protein_coding retained_intron MGP_BALBcJ_T0096058.1 MGP_BALBcJ_G0035663.1 mouse_genomes_project X 43190571 43201506 + MGP_BALBcJ_P0096058 Rab33a protein_coding protein_coding MGP_BALBcJ_T0011197.1 MGP_BALBcJ_G0009322.1 mouse_genomes_project X 142218017 142218155 + Gm24627 miRNA miRNA MGP_BALBcJ_T0097956.1 MGP_BALBcJ_G0036191.1 mouse_genomes_project X 155251524 155392983 + MGP_BALBcJ_P0097956 protein_coding protein_coding MGP_BALBcJ_T0016258.1 MGP_BALBcJ_G0014355.1 mouse_genomes_project X 39008665 39009113 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016838.1 MGP_BALBcJ_G0014935.1 mouse_genomes_project X 158077758 158078200 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016341.1 MGP_BALBcJ_G0014438.1 mouse_genomes_project X 58223290 58225133 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101549.1 MGP_BALBcJ_G0039585.1 mouse_genomes_project X 125884878 125885007 - Gm25170 snoRNA snoRNA MGP_BALBcJ_T0096488.1 MGP_BALBcJ_G0035794.1 mouse_genomes_project X 68947104 68970669 - MGP_BALBcJ_P0096488 Hcfc1 protein_coding protein_coding MGP_BALBcJ_T0096489.1 MGP_BALBcJ_G0035794.1 mouse_genomes_project X 68947107 68953563 - MGP_BALBcJ_P0096489 Hcfc1 protein_coding protein_coding MGP_BALBcJ_T0096490.1 MGP_BALBcJ_G0035794.1 mouse_genomes_project X 68947109 68970663 - MGP_BALBcJ_P0096490 Hcfc1 protein_coding protein_coding MGP_BALBcJ_T0096491.1 MGP_BALBcJ_G0035794.1 mouse_genomes_project X 68949633 68951745 - Hcfc1 protein_coding retained_intron MGP_BALBcJ_T0096492.1 MGP_BALBcJ_G0035794.1 mouse_genomes_project X 68951507 68952659 - Hcfc1 protein_coding processed_transcript MGP_BALBcJ_T0096493.1 MGP_BALBcJ_G0035794.1 mouse_genomes_project X 68959428 68961737 - Hcfc1 protein_coding processed_transcript MGP_BALBcJ_T0096181.1 MGP_BALBcJ_G0035712.1 mouse_genomes_project X 51835693 51941042 + MGP_BALBcJ_P0096181 protein_coding protein_coding MGP_BALBcJ_T0096182.1 MGP_BALBcJ_G0035712.1 mouse_genomes_project X 51838069 51941074 + MGP_BALBcJ_P0096182 protein_coding protein_coding MGP_BALBcJ_T0096183.1 MGP_BALBcJ_G0035712.1 mouse_genomes_project X 51854087 51962296 + MGP_BALBcJ_P0096183 protein_coding protein_coding MGP_BALBcJ_T0096184.1 MGP_BALBcJ_G0035712.1 mouse_genomes_project X 51873247 51873778 + MGP_BALBcJ_P0096184 protein_coding protein_coding MGP_BALBcJ_T0096185.1 MGP_BALBcJ_G0035712.1 mouse_genomes_project X 51924138 51941057 + MGP_BALBcJ_P0096185 protein_coding protein_coding MGP_BALBcJ_T0096186.1 MGP_BALBcJ_G0035712.1 mouse_genomes_project X 51927983 51941064 + MGP_BALBcJ_P0096186 protein_coding protein_coding MGP_BALBcJ_T0098779.1 MGP_BALBcJ_G0036833.1 mouse_genomes_project X 110465091 110465472 + Gm27414 scaRNA scaRNA MGP_BALBcJ_T0096812.1 MGP_BALBcJ_G0035860.1 mouse_genomes_project X 84421946 84432679 - MGP_BALBcJ_P0096812 Pet2 protein_coding protein_coding MGP_BALBcJ_T0096813.1 MGP_BALBcJ_G0035860.1 mouse_genomes_project X 84421946 84432679 - MGP_BALBcJ_P0096813 Pet2 protein_coding protein_coding MGP_BALBcJ_T0011182.1 MGP_BALBcJ_G0009307.1 mouse_genomes_project X 129094306 129094388 + Mir3112 miRNA miRNA MGP_BALBcJ_T0095736.1 MGP_BALBcJ_G0035557.1 mouse_genomes_project X 14769960 14807262 + MGP_BALBcJ_P0095736 Chst7 protein_coding protein_coding MGP_BALBcJ_T0016733.1 MGP_BALBcJ_G0014830.1 mouse_genomes_project X 137199541 137199901 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097442.1 MGP_BALBcJ_G0036053.1 mouse_genomes_project X 130715464 130725419 - MGP_BALBcJ_P0097442 Nxf7 protein_coding protein_coding MGP_BALBcJ_T0097443.1 MGP_BALBcJ_G0036053.1 mouse_genomes_project X 130715464 130735108 - MGP_BALBcJ_P0097443 Nxf7 protein_coding protein_coding MGP_BALBcJ_T0097444.1 MGP_BALBcJ_G0036053.1 mouse_genomes_project X 130715672 130730225 - MGP_BALBcJ_P0097444 Nxf7 protein_coding protein_coding MGP_BALBcJ_T0097445.1 MGP_BALBcJ_G0036053.1 mouse_genomes_project X 130720715 130722469 - Nxf7 protein_coding retained_intron MGP_BALBcJ_T0097446.1 MGP_BALBcJ_G0036053.1 mouse_genomes_project X 130724778 130735089 - MGP_BALBcJ_P0097446 Nxf7 protein_coding protein_coding MGP_BALBcJ_T0097447.1 MGP_BALBcJ_G0036053.1 mouse_genomes_project X 130724961 130733039 - MGP_BALBcJ_P0097447 Nxf7 protein_coding protein_coding MGP_BALBcJ_T0016791.1 MGP_BALBcJ_G0014888.1 mouse_genomes_project X 149404897 149405496 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005594.1 MGP_BALBcJ_G0004714.1 mouse_genomes_project X 162622992 162625945 + Gm15239 antisense antisense MGP_BALBcJ_T0016824.1 MGP_BALBcJ_G0014921.1 mouse_genomes_project X 155286630 155287028 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096354.1 MGP_BALBcJ_G0035768.1 mouse_genomes_project X 67898602 67943529 + MGP_BALBcJ_P0096354 Zfp185 protein_coding protein_coding MGP_BALBcJ_T0096355.1 MGP_BALBcJ_G0035768.1 mouse_genomes_project X 67898623 67943529 + MGP_BALBcJ_P0096355 Zfp185 protein_coding protein_coding MGP_BALBcJ_T0096356.1 MGP_BALBcJ_G0035768.1 mouse_genomes_project X 67899516 67908833 + MGP_BALBcJ_P0096356 Zfp185 protein_coding protein_coding MGP_BALBcJ_T0011174.1 MGP_BALBcJ_G0009299.1 mouse_genomes_project X 98957021 98957070 + Mir374c miRNA miRNA MGP_BALBcJ_T0016827.1 MGP_BALBcJ_G0014924.1 mouse_genomes_project X 155566664 155567146 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095832.1 MGP_BALBcJ_G0035584.1 mouse_genomes_project X 18704112 18705345 - MGP_BALBcJ_P0095832 Gm4985 protein_coding protein_coding MGP_BALBcJ_T0095830.1 MGP_BALBcJ_G0035583.1 mouse_genomes_project X 18629024 18655604 + MGP_BALBcJ_P0095830 Gm4907 protein_coding protein_coding MGP_BALBcJ_T0095831.1 MGP_BALBcJ_G0035583.1 mouse_genomes_project X 18640858 18655494 + MGP_BALBcJ_P0095831 Gm4907 protein_coding protein_coding MGP_BALBcJ_T0098053.1 MGP_BALBcJ_G0036215.1 mouse_genomes_project X 159394365 159444730 + MGP_BALBcJ_P0098053 Ace2 protein_coding protein_coding MGP_BALBcJ_T0098054.1 MGP_BALBcJ_G0036215.1 mouse_genomes_project X 159395511 159444730 + MGP_BALBcJ_P0098054 Ace2 protein_coding protein_coding MGP_BALBcJ_T0098055.1 MGP_BALBcJ_G0036215.1 mouse_genomes_project X 159417443 159442134 + MGP_BALBcJ_P0098055 Ace2 protein_coding protein_coding MGP_BALBcJ_T0096875.1 MGP_BALBcJ_G0035884.1 mouse_genomes_project X 89962899 89967716 + MGP_BALBcJ_P0096875 Zxdb protein_coding protein_coding MGP_BALBcJ_T0018631.1 MGP_BALBcJ_G0015728.1 mouse_genomes_project X 130090592 130104011 - processed_transcript processed_transcript MGP_BALBcJ_T0018632.1 MGP_BALBcJ_G0015728.1 mouse_genomes_project X 130091391 130112369 - processed_transcript processed_transcript MGP_BALBcJ_T0096243.1 MGP_BALBcJ_G0035732.1 mouse_genomes_project X 57389208 57390030 + MGP_BALBcJ_P0096243 4931400O07Rik protein_coding protein_coding MGP_BALBcJ_T0097299.1 MGP_BALBcJ_G0036007.1 mouse_genomes_project X 107849633 107919533 - MGP_BALBcJ_P0097299 Pof1b protein_coding protein_coding MGP_BALBcJ_T0096227.1 MGP_BALBcJ_G0035724.1 mouse_genomes_project X 54927695 54959163 + MGP_BALBcJ_P0096227 F9 protein_coding protein_coding MGP_BALBcJ_T0016690.1 MGP_BALBcJ_G0014787.1 mouse_genomes_project X 131501497 131502861 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097064.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96689367 96699667 + MGP_BALBcJ_P0097064 Nono protein_coding protein_coding MGP_BALBcJ_T0097065.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96689604 96709951 + MGP_BALBcJ_P0097065 Nono protein_coding protein_coding MGP_BALBcJ_T0097066.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96689784 96703594 + Nono protein_coding retained_intron MGP_BALBcJ_T0097067.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96703753 96705494 + Nono protein_coding retained_intron MGP_BALBcJ_T0097068.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96704468 96709065 + Nono protein_coding retained_intron MGP_BALBcJ_T0097069.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96705895 96708866 + Nono protein_coding processed_transcript MGP_BALBcJ_T0097070.1 MGP_BALBcJ_G0035929.1 mouse_genomes_project X 96706985 96708981 + Nono protein_coding retained_intron MGP_BALBcJ_T0095454.1 MGP_BALBcJ_G0035486.1 mouse_genomes_project X 2171525 2187458 + MGP_BALBcJ_P0095454 Foxp3 protein_coding protein_coding MGP_BALBcJ_T0095455.1 MGP_BALBcJ_G0035486.1 mouse_genomes_project X 2171542 2187449 + MGP_BALBcJ_P0095455 Foxp3 protein_coding protein_coding MGP_BALBcJ_T0095456.1 MGP_BALBcJ_G0035486.1 mouse_genomes_project X 2172332 2187449 + MGP_BALBcJ_P0095456 Foxp3 protein_coding protein_coding MGP_BALBcJ_T0095457.1 MGP_BALBcJ_G0035486.1 mouse_genomes_project X 2178054 2187458 + MGP_BALBcJ_P0095457 Foxp3 protein_coding protein_coding MGP_BALBcJ_T0011113.1 MGP_BALBcJ_G0009238.1 mouse_genomes_project X 45854521 45854601 - Gm25241 miRNA miRNA MGP_BALBcJ_T0016191.1 MGP_BALBcJ_G0014288.1 mouse_genomes_project X 12017334 12019667 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016643.1 MGP_BALBcJ_G0014740.1 mouse_genomes_project X 115945898 115947075 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097540.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134430410 134454951 + MGP_BALBcJ_P0097540 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0097541.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134430410 134458309 + MGP_BALBcJ_P0097541 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0097542.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134430412 134458311 + MGP_BALBcJ_P0097542 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0097543.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134430476 134433654 + Mum1l1 protein_coding retained_intron MGP_BALBcJ_T0097544.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134437534 134458311 + MGP_BALBcJ_P0097544 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0097545.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134437534 134458311 + MGP_BALBcJ_P0097545 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0097546.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134437534 134454778 + MGP_BALBcJ_P0097546 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0097547.1 MGP_BALBcJ_G0036089.1 mouse_genomes_project X 134437534 134455017 + MGP_BALBcJ_P0097547 Mum1l1 protein_coding protein_coding MGP_BALBcJ_T0011169.1 MGP_BALBcJ_G0009294.1 mouse_genomes_project X 95628226 95628315 + Mir676 miRNA miRNA MGP_BALBcJ_T0101789.1 MGP_BALBcJ_G0039731.1 mouse_genomes_project X 16123027 16127141 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101790.1 MGP_BALBcJ_G0039731.1 mouse_genomes_project X 16123102 16125185 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0096074.1 MGP_BALBcJ_G0035666.1 mouse_genomes_project X 43339242 43345964 - MGP_BALBcJ_P0096074 Gpr119 protein_coding protein_coding MGP_BALBcJ_T0095512.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364748 2368259 + Tfe3 protein_coding retained_intron MGP_BALBcJ_T0095513.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364774 2368955 + Tfe3 protein_coding processed_transcript MGP_BALBcJ_T0095514.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364846 2378191 + MGP_BALBcJ_P0095514 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095515.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364852 2378188 + MGP_BALBcJ_P0095515 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095516.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364864 2378190 + MGP_BALBcJ_P0095516 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095517.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364883 2378188 + MGP_BALBcJ_P0095517 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095518.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364885 2378190 + Tfe3 protein_coding retained_intron MGP_BALBcJ_T0095519.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2364955 2378191 + MGP_BALBcJ_P0095519 Tfe3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095520.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2366131 2368980 + MGP_BALBcJ_P0095520 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095521.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2366147 2378190 + MGP_BALBcJ_P0095521 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095522.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2366229 2378186 + MGP_BALBcJ_P0095522 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095523.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2366275 2378188 + MGP_BALBcJ_P0095523 Tfe3 protein_coding protein_coding MGP_BALBcJ_T0095524.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2366840 2378186 + Tfe3 protein_coding retained_intron MGP_BALBcJ_T0095525.1 MGP_BALBcJ_G0035497.1 mouse_genomes_project X 2371617 2373506 + Tfe3 protein_coding retained_intron MGP_BALBcJ_T0009397.1 MGP_BALBcJ_G0007533.1 mouse_genomes_project X 110035588 110037197 + 4930555B12Rik lincRNA lincRNA MGP_BALBcJ_T0016306.1 MGP_BALBcJ_G0014403.1 mouse_genomes_project X 52702304 52702898 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016210.1 MGP_BALBcJ_G0014307.1 mouse_genomes_project X 15901848 15902645 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095748.1 MGP_BALBcJ_G0035560.1 mouse_genomes_project X 15155852 15253136 + MGP_BALBcJ_P0095748 Jade3 protein_coding protein_coding MGP_BALBcJ_T0095749.1 MGP_BALBcJ_G0035560.1 mouse_genomes_project X 15155952 15227658 + Jade3 protein_coding retained_intron MGP_BALBcJ_T0095750.1 MGP_BALBcJ_G0035560.1 mouse_genomes_project X 15193975 15251093 + MGP_BALBcJ_P0095750 Jade3 protein_coding unknown_likely_coding MGP_BALBcJ_T0095751.1 MGP_BALBcJ_G0035560.1 mouse_genomes_project X 15193986 15251093 + MGP_BALBcJ_P0095751 Jade3 protein_coding protein_coding MGP_BALBcJ_T0097573.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135130942 135234967 - MGP_BALBcJ_P0097573 Rbm41 protein_coding protein_coding MGP_BALBcJ_T0097574.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135183956 135234929 - MGP_BALBcJ_P0097574 Rbm41 protein_coding protein_coding MGP_BALBcJ_T0097575.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135183988 135234914 - MGP_BALBcJ_P0097575 Rbm41 protein_coding protein_coding MGP_BALBcJ_T0097576.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135184819 135234923 - MGP_BALBcJ_P0097576 Rbm41 protein_coding protein_coding MGP_BALBcJ_T0097577.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135203434 135230456 - Rbm41 protein_coding retained_intron MGP_BALBcJ_T0097578.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135204220 135234908 - Rbm41 protein_coding processed_transcript MGP_BALBcJ_T0097579.1 MGP_BALBcJ_G0036098.1 mouse_genomes_project X 135228730 135234938 - Rbm41 protein_coding retained_intron MGP_BALBcJ_T0009402.1 MGP_BALBcJ_G0007538.1 mouse_genomes_project X 135420579 135515778 - Gm15046 lincRNA lincRNA MGP_BALBcJ_T0095825.1 MGP_BALBcJ_G0035582.1 mouse_genomes_project X 18421036 18534158 + MGP_BALBcJ_P0095825 protein_coding protein_coding MGP_BALBcJ_T0095826.1 MGP_BALBcJ_G0035582.1 mouse_genomes_project X 18421062 18482969 + protein_coding retained_intron MGP_BALBcJ_T0095827.1 MGP_BALBcJ_G0035582.1 mouse_genomes_project X 18421081 18534193 + MGP_BALBcJ_P0095827 protein_coding protein_coding MGP_BALBcJ_T0095828.1 MGP_BALBcJ_G0035582.1 mouse_genomes_project X 18421144 18488299 + MGP_BALBcJ_P0095828 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095829.1 MGP_BALBcJ_G0035582.1 mouse_genomes_project X 18505879 18510629 + protein_coding retained_intron MGP_BALBcJ_T0016336.1 MGP_BALBcJ_G0014433.1 mouse_genomes_project X 57292249 57292971 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009420.1 MGP_BALBcJ_G0007549.1 mouse_genomes_project X 161933562 161961981 + Gm1720 lincRNA lincRNA MGP_BALBcJ_T0096255.1 MGP_BALBcJ_G0035740.1 mouse_genomes_project X 62880787 62882374 - MGP_BALBcJ_P0096255 4933436I01Rik protein_coding protein_coding MGP_BALBcJ_T0097201.1 MGP_BALBcJ_G0035972.1 mouse_genomes_project X 101539657 101540076 + Tlr13 protein_coding retained_intron MGP_BALBcJ_T0097202.1 MGP_BALBcJ_G0035972.1 mouse_genomes_project X 101539682 101557911 + MGP_BALBcJ_P0097202 Tlr13 protein_coding protein_coding MGP_BALBcJ_T0016760.1 MGP_BALBcJ_G0014857.1 mouse_genomes_project X 141067795 141068630 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097454.1 MGP_BALBcJ_G0036058.1 mouse_genomes_project X 130880201 130884791 + MGP_BALBcJ_P0097454 Armcx5 protein_coding protein_coding MGP_BALBcJ_T0097459.1 MGP_BALBcJ_G0036058.1 mouse_genomes_project X 130880203 130882875 + Armcx5 protein_coding retained_intron MGP_BALBcJ_T0097487.1 MGP_BALBcJ_G0036071.1 mouse_genomes_project X 131855880 131857876 + MGP_BALBcJ_P0097487 Tceal3 protein_coding protein_coding MGP_BALBcJ_T0016635.1 MGP_BALBcJ_G0014732.1 mouse_genomes_project X 113708685 113709794 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096367.1 MGP_BALBcJ_G0035776.1 mouse_genomes_project X 68435208 68457527 - MGP_BALBcJ_P0096367 Haus7 protein_coding protein_coding MGP_BALBcJ_T0096368.1 MGP_BALBcJ_G0035776.1 mouse_genomes_project X 68435208 68457527 - MGP_BALBcJ_P0096368 Haus7 protein_coding protein_coding MGP_BALBcJ_T0096369.1 MGP_BALBcJ_G0035776.1 mouse_genomes_project X 68435210 68445188 - Haus7 protein_coding processed_transcript MGP_BALBcJ_T0009377.1 MGP_BALBcJ_G0007526.1 mouse_genomes_project X 95987540 95995976 + Gm14902 lincRNA lincRNA MGP_BALBcJ_T0096718.1 MGP_BALBcJ_G0035828.1 mouse_genomes_project X 70467596 70473676 - MGP_BALBcJ_P0096718 Mtcp1 protein_coding protein_coding MGP_BALBcJ_T0096719.1 MGP_BALBcJ_G0035828.1 mouse_genomes_project X 70467802 70473551 - Mtcp1 protein_coding processed_transcript MGP_BALBcJ_T0096720.1 MGP_BALBcJ_G0035828.1 mouse_genomes_project X 70467929 70473721 - MGP_BALBcJ_P0096720 Mtcp1 protein_coding protein_coding MGP_BALBcJ_T0096721.1 MGP_BALBcJ_G0035828.1 mouse_genomes_project X 70470306 70473701 - Mtcp1 protein_coding retained_intron MGP_BALBcJ_T0101794.1 MGP_BALBcJ_G0039734.1 mouse_genomes_project X 32394382 32394833 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0011177.1 MGP_BALBcJ_G0009302.1 mouse_genomes_project X 100750612 100750700 - Mir384 miRNA miRNA MGP_BALBcJ_T0016377.1 MGP_BALBcJ_G0014474.1 mouse_genomes_project X 67620145 67620481 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016366.1 MGP_BALBcJ_G0014463.1 mouse_genomes_project X 65371221 65372960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016302.1 MGP_BALBcJ_G0014399.1 mouse_genomes_project X 52584438 52584684 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016181.1 MGP_BALBcJ_G0014278.1 mouse_genomes_project X 8734615 8736840 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098031.1 MGP_BALBcJ_G0036208.1 mouse_genomes_project X 158757348 158793869 - MGP_BALBcJ_P0098031 Grpr protein_coding protein_coding MGP_BALBcJ_T0098726.1 MGP_BALBcJ_G0036780.1 mouse_genomes_project X 54020642 54020874 - Gm26351 ribozyme ribozyme MGP_BALBcJ_T0095953.1 MGP_BALBcJ_G0035638.1 mouse_genomes_project X 33498262 33685114 + MGP_BALBcJ_P0095953 6030498E09Rik protein_coding protein_coding MGP_BALBcJ_T0095954.1 MGP_BALBcJ_G0035638.1 mouse_genomes_project X 33677996 33679468 + MGP_BALBcJ_P0095954 6030498E09Rik protein_coding protein_coding MGP_BALBcJ_T0011758.1 MGP_BALBcJ_G0009883.1 mouse_genomes_project X 133370846 133371105 - Gm24675 misc_RNA misc_RNA MGP_BALBcJ_T0096754.1 MGP_BALBcJ_G0035843.1 mouse_genomes_project X 73319284 73324818 - MGP_BALBcJ_P0096754 Gm14743 protein_coding protein_coding MGP_BALBcJ_T0016441.1 MGP_BALBcJ_G0014538.1 mouse_genomes_project X 82654601 82655479 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005574.1 MGP_BALBcJ_G0004700.1 mouse_genomes_project X 90768964 90857981 + antisense antisense MGP_BALBcJ_T0016273.1 MGP_BALBcJ_G0014370.1 mouse_genomes_project X 43542896 43543193 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009374.1 MGP_BALBcJ_G0007523.1 mouse_genomes_project X 87661010 87661690 + 1700010D01Rik lincRNA lincRNA MGP_BALBcJ_T0011181.1 MGP_BALBcJ_G0009306.1 mouse_genomes_project X 125856976 125857086 - Gm26209 miRNA miRNA MGP_BALBcJ_T0016789.1 MGP_BALBcJ_G0014886.1 mouse_genomes_project X 148840927 148841693 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100276.1 MGP_BALBcJ_G0038312.1 mouse_genomes_project X 100427732 100427843 - Gm22090 snRNA snRNA MGP_BALBcJ_T0095449.1 MGP_BALBcJ_G0035485.1 mouse_genomes_project X 2149147 2166088 - MGP_BALBcJ_P0095449 Ppp1r3f protein_coding protein_coding MGP_BALBcJ_T0095450.1 MGP_BALBcJ_G0035485.1 mouse_genomes_project X 2150803 2166053 - MGP_BALBcJ_P0095450 Ppp1r3f protein_coding protein_coding MGP_BALBcJ_T0095451.1 MGP_BALBcJ_G0035485.1 mouse_genomes_project X 2151073 2156054 - Ppp1r3f protein_coding processed_transcript MGP_BALBcJ_T0095452.1 MGP_BALBcJ_G0035485.1 mouse_genomes_project X 2152093 2164648 - MGP_BALBcJ_P0095452 Ppp1r3f protein_coding protein_coding MGP_BALBcJ_T0095453.1 MGP_BALBcJ_G0035485.1 mouse_genomes_project X 2154081 2156085 - Ppp1r3f protein_coding processed_transcript MGP_BALBcJ_T0016298.1 MGP_BALBcJ_G0014395.1 mouse_genomes_project X 51115250 51115817 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016457.1 MGP_BALBcJ_G0014554.1 mouse_genomes_project X 85109269 85110025 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016591.1 MGP_BALBcJ_G0014688.1 mouse_genomes_project X 107078003 107078648 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016831.1 MGP_BALBcJ_G0014928.1 mouse_genomes_project X 156531880 156532484 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101809.1 MGP_BALBcJ_G0039746.1 mouse_genomes_project X 132236210 132236506 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0098694.1 MGP_BALBcJ_G0036748.1 mouse_genomes_project X 81366023 81366142 - n-R5s10 rRNA rRNA MGP_BALBcJ_T0016734.1 MGP_BALBcJ_G0014831.1 mouse_genomes_project X 137341677 137342619 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011147.1 MGP_BALBcJ_G0009272.1 mouse_genomes_project X 61860658 61860716 - Mir465d miRNA miRNA MGP_BALBcJ_T0102847.1 MGP_BALBcJ_G0040662.1 mouse_genomes_project X 30530325 30546243 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097629.1 MGP_BALBcJ_G0036119.1 mouse_genomes_project X 137817928 137974258 + MGP_BALBcJ_P0097629 Tmem164 protein_coding protein_coding MGP_BALBcJ_T0097630.1 MGP_BALBcJ_G0036119.1 mouse_genomes_project X 137819301 137906364 + Tmem164 protein_coding retained_intron MGP_BALBcJ_T0097631.1 MGP_BALBcJ_G0036119.1 mouse_genomes_project X 137906066 137979376 + MGP_BALBcJ_P0097631 Tmem164 protein_coding protein_coding MGP_BALBcJ_T0098047.1 MGP_BALBcJ_G0036213.1 mouse_genomes_project X 159315980 159321388 - MGP_BALBcJ_P0098047 protein_coding protein_coding MGP_BALBcJ_T0098048.1 MGP_BALBcJ_G0036213.1 mouse_genomes_project X 159315980 159321417 - MGP_BALBcJ_P0098048 protein_coding protein_coding MGP_BALBcJ_T0098049.1 MGP_BALBcJ_G0036213.1 mouse_genomes_project X 159317153 159321760 - MGP_BALBcJ_P0098049 protein_coding protein_coding MGP_BALBcJ_T0016462.1 MGP_BALBcJ_G0014559.1 mouse_genomes_project X 86439783 86440447 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016649.1 MGP_BALBcJ_G0014746.1 mouse_genomes_project X 117221841 117222137 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098695.1 MGP_BALBcJ_G0036749.1 mouse_genomes_project X 98131192 98131293 + Gm26152 rRNA rRNA MGP_BALBcJ_T0016394.1 MGP_BALBcJ_G0014491.1 mouse_genomes_project X 71426653 71427425 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101519.1 MGP_BALBcJ_G0039555.1 mouse_genomes_project X 46464085 46464202 + Gm22539 snoRNA snoRNA MGP_BALBcJ_T0016860.1 MGP_BALBcJ_G0014957.1 mouse_genomes_project X 163669123 163669846 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097333.1 MGP_BALBcJ_G0036020.1 mouse_genomes_project X 117388038 117390873 - MGP_BALBcJ_P0097333 Nap1l3 protein_coding protein_coding MGP_BALBcJ_T0016315.1 MGP_BALBcJ_G0014412.1 mouse_genomes_project X 54972283 54973402 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011184.1 MGP_BALBcJ_G0009309.1 mouse_genomes_project X 130884184 130884238 + Mir7646 miRNA miRNA MGP_BALBcJ_T0101533.1 MGP_BALBcJ_G0039569.1 mouse_genomes_project X 73613160 73613294 - Gm22843 snoRNA snoRNA MGP_BALBcJ_T0098104.1 MGP_BALBcJ_G0036229.1 mouse_genomes_project X 161709972 161723113 + MGP_BALBcJ_P0098104 Trappc2 protein_coding protein_coding MGP_BALBcJ_T0098105.1 MGP_BALBcJ_G0036229.1 mouse_genomes_project X 161710174 161721328 + Trappc2 protein_coding retained_intron MGP_BALBcJ_T0098106.1 MGP_BALBcJ_G0036229.1 mouse_genomes_project X 161710174 161723111 + MGP_BALBcJ_P0098106 Trappc2 protein_coding protein_coding MGP_BALBcJ_T0098107.1 MGP_BALBcJ_G0036229.1 mouse_genomes_project X 161714701 161723113 + MGP_BALBcJ_P0098107 Trappc2 protein_coding protein_coding MGP_BALBcJ_T0016284.1 MGP_BALBcJ_G0014381.1 mouse_genomes_project X 45854434 45854832 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011189.1 MGP_BALBcJ_G0009314.1 mouse_genomes_project X 138098536 138098631 - Gm44351 miRNA miRNA MGP_BALBcJ_T0016855.1 MGP_BALBcJ_G0014952.1 mouse_genomes_project X 162291071 162291606 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096674.1 MGP_BALBcJ_G0035818.1 mouse_genomes_project X 69603917 69604865 + MGP_BALBcJ_P0096674 Olfr1325 protein_coding protein_coding MGP_BALBcJ_T0011122.1 MGP_BALBcJ_G0009247.1 mouse_genomes_project X 47675375 47675457 - Mir450b miRNA miRNA MGP_BALBcJ_T0097737.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145941271 145949230 - MGP_BALBcJ_P0097737 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097738.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145941322 145947853 - Maged2 protein_coding retained_intron MGP_BALBcJ_T0097739.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145941322 145948592 - MGP_BALBcJ_P0097739 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097740.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145941325 145949154 - MGP_BALBcJ_P0097740 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097741.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145941618 145947600 - MGP_BALBcJ_P0097741 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097742.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145945759 145947963 - MGP_BALBcJ_P0097742 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097743.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145945776 145948039 - MGP_BALBcJ_P0097743 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097744.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145945985 145947347 - Maged2 protein_coding processed_transcript MGP_BALBcJ_T0097745.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145946023 145949166 - MGP_BALBcJ_P0097745 Maged2 protein_coding protein_coding MGP_BALBcJ_T0097746.1 MGP_BALBcJ_G0036139.1 mouse_genomes_project X 145946760 145947843 - MGP_BALBcJ_P0097746 Maged2 protein_coding protein_coding MGP_BALBcJ_T0102891.1 MGP_BALBcJ_G0040706.1 mouse_genomes_project X 149416168 149811249 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101552.1 MGP_BALBcJ_G0039588.1 mouse_genomes_project X 132332963 132333078 - Gm25770 snoRNA snoRNA MGP_BALBcJ_T0097852.1 MGP_BALBcJ_G0036161.1 mouse_genomes_project X 148417547 148551857 + MGP_BALBcJ_P0097852 Klf8 protein_coding protein_coding MGP_BALBcJ_T0097853.1 MGP_BALBcJ_G0036161.1 mouse_genomes_project X 148417829 148577180 + MGP_BALBcJ_P0097853 Klf8 protein_coding protein_coding MGP_BALBcJ_T0097854.1 MGP_BALBcJ_G0036161.1 mouse_genomes_project X 148539880 148576845 + MGP_BALBcJ_P0097854 Klf8 protein_coding protein_coding MGP_BALBcJ_T0016297.1 MGP_BALBcJ_G0014394.1 mouse_genomes_project X 50639708 50640588 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096852.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89432680 89436241 + Klhl15 protein_coding processed_transcript MGP_BALBcJ_T0096853.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89432685 89450708 + MGP_BALBcJ_P0096853 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0096854.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433008 89452031 + MGP_BALBcJ_P0096854 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0096855.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433011 89471221 + MGP_BALBcJ_P0096855 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0096856.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433068 89453936 + MGP_BALBcJ_P0096856 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0096857.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433071 89470450 + Klhl15 protein_coding retained_intron MGP_BALBcJ_T0096858.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433071 89452035 + MGP_BALBcJ_P0096858 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0096859.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433392 89471215 + MGP_BALBcJ_P0096859 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0096860.1 MGP_BALBcJ_G0035879.1 mouse_genomes_project X 89433894 89475455 + MGP_BALBcJ_P0096860 Klhl15 protein_coding protein_coding MGP_BALBcJ_T0101543.1 MGP_BALBcJ_G0039579.1 mouse_genomes_project X 111787777 111787892 + Gm24438 snoRNA snoRNA MGP_BALBcJ_T0011110.1 MGP_BALBcJ_G0009235.1 mouse_genomes_project X 36367412 36367497 + Gm22413 miRNA miRNA MGP_BALBcJ_T0016408.1 MGP_BALBcJ_G0014505.1 mouse_genomes_project X 73476914 73478010 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011112.1 MGP_BALBcJ_G0009237.1 mouse_genomes_project X 43314984 43315103 + Gm27828 miRNA miRNA MGP_BALBcJ_T0102877.1 MGP_BALBcJ_G0040692.1 mouse_genomes_project X 98022599 98103845 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016177.1 MGP_BALBcJ_G0014274.1 mouse_genomes_project X 8099664 8099845 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011096.1 MGP_BALBcJ_G0009221.1 mouse_genomes_project X 1838232 1838328 - Mir532 miRNA miRNA MGP_BALBcJ_T0016740.1 MGP_BALBcJ_G0014837.1 mouse_genomes_project X 137756965 137757376 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016277.1 MGP_BALBcJ_G0014374.1 mouse_genomes_project X 44562781 44563454 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097450.1 MGP_BALBcJ_G0036055.1 mouse_genomes_project X 130779925 130827349 - MGP_BALBcJ_P0097450 Tcp11x2 protein_coding protein_coding MGP_BALBcJ_T0016265.1 MGP_BALBcJ_G0014362.1 mouse_genomes_project X 40499948 40500183 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016313.1 MGP_BALBcJ_G0014410.1 mouse_genomes_project X 54138494 54139170 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096148.1 MGP_BALBcJ_G0035699.1 mouse_genomes_project X 48384735 48399123 - MGP_BALBcJ_P0096148 1700013H16Rik protein_coding protein_coding MGP_BALBcJ_T0016539.1 MGP_BALBcJ_G0014636.1 mouse_genomes_project X 98698486 98698941 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096387.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68674501 68684362 + MGP_BALBcJ_P0096387 Slc6a8 protein_coding protein_coding MGP_BALBcJ_T0096388.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68675561 68683147 + MGP_BALBcJ_P0096388 Slc6a8 protein_coding protein_coding MGP_BALBcJ_T0096389.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68675615 68684365 + MGP_BALBcJ_P0096389 Slc6a8 protein_coding protein_coding MGP_BALBcJ_T0096390.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68675773 68679181 + Slc6a8 protein_coding retained_intron MGP_BALBcJ_T0096391.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68677361 68679200 + MGP_BALBcJ_P0096391 Slc6a8 protein_coding protein_coding MGP_BALBcJ_T0096392.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68678701 68684362 + MGP_BALBcJ_P0096392 Slc6a8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096393.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68678914 68681624 + Slc6a8 protein_coding retained_intron MGP_BALBcJ_T0096394.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68680009 68682956 + Slc6a8 protein_coding retained_intron MGP_BALBcJ_T0096395.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68680733 68681855 + Slc6a8 protein_coding processed_transcript MGP_BALBcJ_T0096396.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68680748 68681771 + Slc6a8 protein_coding retained_intron MGP_BALBcJ_T0096397.1 MGP_BALBcJ_G0035781.1 mouse_genomes_project X 68680748 68681858 + Slc6a8 protein_coding retained_intron MGP_BALBcJ_T0097395.1 MGP_BALBcJ_G0036041.1 mouse_genomes_project X 129489081 129505503 - MGP_BALBcJ_P0097395 Taf7l protein_coding protein_coding MGP_BALBcJ_T0097396.1 MGP_BALBcJ_G0036041.1 mouse_genomes_project X 129489521 129504007 - MGP_BALBcJ_P0097396 Taf7l protein_coding protein_coding MGP_BALBcJ_T0097397.1 MGP_BALBcJ_G0036041.1 mouse_genomes_project X 129498840 129504002 - Taf7l protein_coding processed_transcript MGP_BALBcJ_T0011185.1 MGP_BALBcJ_G0009310.1 mouse_genomes_project X 130923482 130923586 - Mir1970 miRNA miRNA MGP_BALBcJ_T0011120.1 MGP_BALBcJ_G0009245.1 mouse_genomes_project X 47348979 47349062 - Mir18b miRNA miRNA MGP_BALBcJ_T0016491.1 MGP_BALBcJ_G0014588.1 mouse_genomes_project X 90510094 90512087 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096528.1 MGP_BALBcJ_G0035798.1 mouse_genomes_project X 69156861 69174239 - MGP_BALBcJ_P0096528 Tex28 protein_coding protein_coding MGP_BALBcJ_T0096529.1 MGP_BALBcJ_G0035798.1 mouse_genomes_project X 69156861 69174239 - MGP_BALBcJ_P0096529 Tex28 protein_coding protein_coding MGP_BALBcJ_T0011091.1 MGP_BALBcJ_G0009216.1 mouse_genomes_project X 687326 687406 + Gm27907 miRNA miRNA MGP_BALBcJ_T0097246.1 MGP_BALBcJ_G0035987.1 mouse_genomes_project X 103218610 103297835 + MGP_BALBcJ_P0097246 Fam46d protein_coding protein_coding MGP_BALBcJ_T0097247.1 MGP_BALBcJ_G0035987.1 mouse_genomes_project X 103242415 103295485 + MGP_BALBcJ_P0097247 Fam46d protein_coding protein_coding MGP_BALBcJ_T0097248.1 MGP_BALBcJ_G0035987.1 mouse_genomes_project X 103242510 103297835 + MGP_BALBcJ_P0097248 Fam46d protein_coding protein_coding MGP_BALBcJ_T0097249.1 MGP_BALBcJ_G0035987.1 mouse_genomes_project X 103242510 103295326 + MGP_BALBcJ_P0097249 Fam46d protein_coding protein_coding MGP_BALBcJ_T0097483.1 MGP_BALBcJ_G0036067.1 mouse_genomes_project X 131426184 131427240 + MGP_BALBcJ_P0097483 Ngfrap1 protein_coding protein_coding MGP_BALBcJ_T0095567.1 MGP_BALBcJ_G0035507.1 mouse_genomes_project X 2532237 2536826 + MGP_BALBcJ_P0095567 Pcsk1n protein_coding protein_coding MGP_BALBcJ_T0016511.1 MGP_BALBcJ_G0014608.1 mouse_genomes_project X 95412169 95412491 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097323.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115248366 115896007 + MGP_BALBcJ_P0097323 Pcdh11x protein_coding protein_coding MGP_BALBcJ_T0097324.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115248366 115896007 + MGP_BALBcJ_P0097324 Pcdh11x protein_coding protein_coding MGP_BALBcJ_T0097325.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115248434 115250571 + Pcdh11x protein_coding retained_intron MGP_BALBcJ_T0097326.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115248434 115900284 + MGP_BALBcJ_P0097326 Pcdh11x protein_coding protein_coding MGP_BALBcJ_T0097327.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115248510 115896007 + MGP_BALBcJ_P0097327 Pcdh11x protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097329.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115337910 115900272 + MGP_BALBcJ_P0097329 Pcdh11x protein_coding protein_coding MGP_BALBcJ_T0097330.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115338684 115381880 + MGP_BALBcJ_P0097330 Pcdh11x protein_coding protein_coding MGP_BALBcJ_T0097331.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115372577 115896005 + MGP_BALBcJ_P0097331 Pcdh11x protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097332.1 MGP_BALBcJ_G0036018.1 mouse_genomes_project X 115372577 115896007 + MGP_BALBcJ_P0097332 Pcdh11x protein_coding protein_coding MGP_BALBcJ_T0018560.1 MGP_BALBcJ_G0015706.1 mouse_genomes_project X 2004293 2013562 - 2010204K13Rik processed_transcript processed_transcript MGP_BALBcJ_T0018561.1 MGP_BALBcJ_G0015706.1 mouse_genomes_project X 2004563 2005302 - 2010204K13Rik processed_transcript processed_transcript MGP_BALBcJ_T0018562.1 MGP_BALBcJ_G0015706.1 mouse_genomes_project X 2004579 2015465 - 2010204K13Rik processed_transcript processed_transcript MGP_BALBcJ_T0018563.1 MGP_BALBcJ_G0015706.1 mouse_genomes_project X 2004582 2037580 - 2010204K13Rik processed_transcript processed_transcript MGP_BALBcJ_T0016797.1 MGP_BALBcJ_G0014894.1 mouse_genomes_project X 150582152 150583703 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009353.1 MGP_BALBcJ_G0007507.1 mouse_genomes_project X 33203991 33210355 + Gm7598 lincRNA lincRNA MGP_BALBcJ_T0016668.1 MGP_BALBcJ_G0014765.1 mouse_genomes_project X 126557583 126558804 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096921.1 MGP_BALBcJ_G0035896.1 mouse_genomes_project X 92006728 92009796 + Gpr165 protein_coding retained_intron MGP_BALBcJ_T0096922.1 MGP_BALBcJ_G0035896.1 mouse_genomes_project X 92006779 92012666 + MGP_BALBcJ_P0096922 Gpr165 protein_coding protein_coding MGP_BALBcJ_T0096923.1 MGP_BALBcJ_G0035896.1 mouse_genomes_project X 92006800 92009061 + Gpr165 protein_coding retained_intron MGP_BALBcJ_T0096924.1 MGP_BALBcJ_G0035896.1 mouse_genomes_project X 92007472 92012560 + Gpr165 protein_coding retained_intron MGP_BALBcJ_T0011179.1 MGP_BALBcJ_G0009304.1 mouse_genomes_project X 108282693 108282763 - Mir361 miRNA miRNA MGP_BALBcJ_T0096999.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96007052 96059503 + MGP_BALBcJ_P0096999 Dlg3 protein_coding protein_coding MGP_BALBcJ_T0097000.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96007053 96059505 + MGP_BALBcJ_P0097000 Dlg3 protein_coding protein_coding MGP_BALBcJ_T0097001.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96007079 96059505 + MGP_BALBcJ_P0097001 Dlg3 protein_coding protein_coding MGP_BALBcJ_T0097002.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96007325 96059507 + Dlg3 protein_coding retained_intron MGP_BALBcJ_T0097003.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96014091 96059505 + MGP_BALBcJ_P0097003 Dlg3 protein_coding protein_coding MGP_BALBcJ_T0097004.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96016597 96059505 + Dlg3 protein_coding processed_transcript MGP_BALBcJ_T0097005.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96036602 96047348 + Dlg3 protein_coding processed_transcript MGP_BALBcJ_T0097006.1 MGP_BALBcJ_G0035917.1 mouse_genomes_project X 96048734 96055528 + Dlg3 protein_coding processed_transcript MGP_BALBcJ_T0097977.1 MGP_BALBcJ_G0036196.1 mouse_genomes_project X 156028653 156060457 + MGP_BALBcJ_P0097977 Rs1 protein_coding protein_coding MGP_BALBcJ_T0097978.1 MGP_BALBcJ_G0036196.1 mouse_genomes_project X 156028820 156055633 + MGP_BALBcJ_P0097978 Rs1 protein_coding protein_coding MGP_BALBcJ_T0097982.1 MGP_BALBcJ_G0036196.1 mouse_genomes_project X 156052280 156056144 + Rs1 protein_coding processed_transcript MGP_BALBcJ_T0097147.1 MGP_BALBcJ_G0035959.1 mouse_genomes_project X 99342814 99367310 - MGP_BALBcJ_P0097147 Rlim protein_coding protein_coding MGP_BALBcJ_T0097148.1 MGP_BALBcJ_G0035959.1 mouse_genomes_project X 99342814 99367310 - MGP_BALBcJ_P0097148 Rlim protein_coding protein_coding MGP_BALBcJ_T0097149.1 MGP_BALBcJ_G0035959.1 mouse_genomes_project X 99363820 99367310 - Rlim protein_coding retained_intron MGP_BALBcJ_T0009404.1 MGP_BALBcJ_G0007540.1 mouse_genomes_project X 139270877 139283460 + lincRNA lincRNA MGP_BALBcJ_T0100278.1 MGP_BALBcJ_G0038314.1 mouse_genomes_project X 101263272 101263384 + Gm23656 snRNA snRNA MGP_BALBcJ_T0097312.1 MGP_BALBcJ_G0036010.1 mouse_genomes_project X 109607857 109681079 + MGP_BALBcJ_P0097312 Klhl4 protein_coding protein_coding MGP_BALBcJ_T0097313.1 MGP_BALBcJ_G0036010.1 mouse_genomes_project X 109607857 109681079 + MGP_BALBcJ_P0097313 Klhl4 protein_coding protein_coding MGP_BALBcJ_T0097314.1 MGP_BALBcJ_G0036010.1 mouse_genomes_project X 109608128 109680758 + MGP_BALBcJ_P0097314 Klhl4 protein_coding protein_coding MGP_BALBcJ_T0016543.1 MGP_BALBcJ_G0014640.1 mouse_genomes_project X 98884919 98885697 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016195.1 MGP_BALBcJ_G0014292.1 mouse_genomes_project X 13095378 13095535 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016180.1 MGP_BALBcJ_G0014277.1 mouse_genomes_project X 8291916 8292452 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100267.1 MGP_BALBcJ_G0038303.1 mouse_genomes_project X 77094672 77094772 + Gm22686 snRNA snRNA MGP_BALBcJ_T0096959.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95559832 + Eda protein_coding retained_intron MGP_BALBcJ_T0096960.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647905 + MGP_BALBcJ_P0096960 Eda protein_coding protein_coding MGP_BALBcJ_T0096961.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647902 + MGP_BALBcJ_P0096961 Eda protein_coding protein_coding MGP_BALBcJ_T0096962.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647902 + MGP_BALBcJ_P0096962 Eda protein_coding protein_coding MGP_BALBcJ_T0096963.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647905 + MGP_BALBcJ_P0096963 Eda protein_coding protein_coding MGP_BALBcJ_T0096964.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647903 + MGP_BALBcJ_P0096964 Eda protein_coding protein_coding MGP_BALBcJ_T0096965.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647903 + MGP_BALBcJ_P0096965 Eda protein_coding protein_coding MGP_BALBcJ_T0096966.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236056 95647903 + MGP_BALBcJ_P0096966 Eda protein_coding protein_coding MGP_BALBcJ_T0096967.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236231 95642955 + MGP_BALBcJ_P0096967 Eda protein_coding protein_coding MGP_BALBcJ_T0096968.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95236231 95644299 + MGP_BALBcJ_P0096968 Eda protein_coding protein_coding MGP_BALBcJ_T0096969.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95632963 95641581 + Eda protein_coding processed_transcript MGP_BALBcJ_T0096970.1 MGP_BALBcJ_G0035906.1 mouse_genomes_project X 95634387 95642179 + Eda protein_coding processed_transcript MGP_BALBcJ_T0016316.1 MGP_BALBcJ_G0014413.1 mouse_genomes_project X 54978173 54978769 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096807.1 MGP_BALBcJ_G0035857.1 mouse_genomes_project X 80962370 80965483 + MGP_BALBcJ_P0096807 Samt3 protein_coding protein_coding MGP_BALBcJ_T0097475.1 MGP_BALBcJ_G0036064.1 mouse_genomes_project X 131367979 131369521 - MGP_BALBcJ_P0097475 Bex1 protein_coding protein_coding MGP_BALBcJ_T0097476.1 MGP_BALBcJ_G0036064.1 mouse_genomes_project X 131367980 131369451 - MGP_BALBcJ_P0097476 Bex1 protein_coding protein_coding MGP_BALBcJ_T0097477.1 MGP_BALBcJ_G0036064.1 mouse_genomes_project X 131368020 131369492 - MGP_BALBcJ_P0097477 Bex1 protein_coding protein_coding MGP_BALBcJ_T0097478.1 MGP_BALBcJ_G0036064.1 mouse_genomes_project X 131368551 131369388 - Bex1 protein_coding retained_intron MGP_BALBcJ_T0018595.1 MGP_BALBcJ_G0015719.1 mouse_genomes_project X 56056795 56060899 + C230004F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0018596.1 MGP_BALBcJ_G0015719.1 mouse_genomes_project X 56056795 56121518 + C230004F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0018597.1 MGP_BALBcJ_G0015719.1 mouse_genomes_project X 56056795 56081280 + C230004F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0018598.1 MGP_BALBcJ_G0015719.1 mouse_genomes_project X 56056795 56075042 + C230004F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0018599.1 MGP_BALBcJ_G0015719.1 mouse_genomes_project X 56056807 56121518 + C230004F18Rik processed_transcript processed_transcript MGP_BALBcJ_T0005561.1 MGP_BALBcJ_G0004688.1 mouse_genomes_project X 52170417 52174133 + Gm14718 antisense antisense MGP_BALBcJ_T0016606.1 MGP_BALBcJ_G0014703.1 mouse_genomes_project X 109183600 109185168 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016679.1 MGP_BALBcJ_G0014776.1 mouse_genomes_project X 129734649 129735007 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096953.1 MGP_BALBcJ_G0035904.1 mouse_genomes_project X 94723214 94728722 - MGP_BALBcJ_P0096953 Pja1 protein_coding protein_coding MGP_BALBcJ_T0096954.1 MGP_BALBcJ_G0035904.1 mouse_genomes_project X 94723218 94728164 - MGP_BALBcJ_P0096954 Pja1 protein_coding protein_coding MGP_BALBcJ_T0096955.1 MGP_BALBcJ_G0035904.1 mouse_genomes_project X 94723248 94728212 - MGP_BALBcJ_P0096955 Pja1 protein_coding protein_coding MGP_BALBcJ_T0096956.1 MGP_BALBcJ_G0035904.1 mouse_genomes_project X 94723595 94728169 - MGP_BALBcJ_P0096956 Pja1 protein_coding protein_coding MGP_BALBcJ_T0096957.1 MGP_BALBcJ_G0035904.1 mouse_genomes_project X 94723627 94728149 - MGP_BALBcJ_P0096957 Pja1 protein_coding protein_coding MGP_BALBcJ_T0016413.1 MGP_BALBcJ_G0014510.1 mouse_genomes_project X 73925633 73928507 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016680.1 MGP_BALBcJ_G0014777.1 mouse_genomes_project X 129804065 129804491 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096145.1 MGP_BALBcJ_G0035696.1 mouse_genomes_project X 48303718 48304119 - MGP_BALBcJ_P0096145 Cxx1c protein_coding protein_coding MGP_BALBcJ_T0016268.1 MGP_BALBcJ_G0014365.1 mouse_genomes_project X 42059064 42059966 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096991.1 MGP_BALBcJ_G0035915.1 mouse_genomes_project X 95873088 95973326 + MGP_BALBcJ_P0096991 Kif4 protein_coding protein_coding MGP_BALBcJ_T0096992.1 MGP_BALBcJ_G0035915.1 mouse_genomes_project X 95881359 95883709 + Kif4 protein_coding retained_intron MGP_BALBcJ_T0096993.1 MGP_BALBcJ_G0035915.1 mouse_genomes_project X 95958240 95970762 + Kif4 protein_coding processed_transcript MGP_BALBcJ_T0095905.1 MGP_BALBcJ_G0035619.1 mouse_genomes_project X 32403090 32408106 - MGP_BALBcJ_P0095905 Rhox2a protein_coding protein_coding MGP_BALBcJ_T0016451.1 MGP_BALBcJ_G0014548.1 mouse_genomes_project X 84090562 84091521 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016202.1 MGP_BALBcJ_G0014299.1 mouse_genomes_project X 14589955 14590418 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096877.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90341169 90466371 - MGP_BALBcJ_P0096877 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096878.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90341282 90496403 - MGP_BALBcJ_P0096878 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096879.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90341285 90467158 - MGP_BALBcJ_P0096879 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096880.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90341291 90467260 - MGP_BALBcJ_P0096880 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096881.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90342524 90496406 - MGP_BALBcJ_P0096881 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096882.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90342613 90496734 - MGP_BALBcJ_P0096882 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096883.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90343871 90496722 - MGP_BALBcJ_P0096883 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096884.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90343902 90496757 - MGP_BALBcJ_P0096884 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096885.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90343951 90381493 - MGP_BALBcJ_P0096885 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096886.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90344266 90347292 - MGP_BALBcJ_P0096886 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096887.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90344267 90353894 - MGP_BALBcJ_P0096887 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096888.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90376844 90466599 - MGP_BALBcJ_P0096888 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096889.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90381413 90496353 - MGP_BALBcJ_P0096889 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096890.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90400892 90467313 - MGP_BALBcJ_P0096890 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0096891.1 MGP_BALBcJ_G0035886.1 mouse_genomes_project X 90412556 90467212 - MGP_BALBcJ_P0096891 Arhgef9 protein_coding protein_coding MGP_BALBcJ_T0097539.1 MGP_BALBcJ_G0036088.1 mouse_genomes_project X 134399405 134401187 + MGP_BALBcJ_P0097539 4933428M09Rik protein_coding protein_coding MGP_BALBcJ_T0016699.1 MGP_BALBcJ_G0014796.1 mouse_genomes_project X 132348005 132352304 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095885.1 MGP_BALBcJ_G0035606.1 mouse_genomes_project X 31945258 31946952 - MGP_BALBcJ_P0095885 Gm9 protein_coding protein_coding MGP_BALBcJ_T0002475.1 MGP_BALBcJ_G0002384.1 mouse_genomes_project X 123335315 123337179 + TEC TEC MGP_BALBcJ_T0097153.1 MGP_BALBcJ_G0035961.1 mouse_genomes_project X 99658652 99797551 - MGP_BALBcJ_P0097153 Abcb7 protein_coding protein_coding MGP_BALBcJ_T0097154.1 MGP_BALBcJ_G0035961.1 mouse_genomes_project X 99725433 99797561 - Abcb7 protein_coding retained_intron MGP_BALBcJ_T0102843.1 MGP_BALBcJ_G0040658.1 mouse_genomes_project X 3811587 3812115 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097485.1 MGP_BALBcJ_G0036069.1 mouse_genomes_project X 131666583 131690738 + MGP_BALBcJ_P0097485 protein_coding protein_coding MGP_BALBcJ_T0016397.1 MGP_BALBcJ_G0014494.1 mouse_genomes_project X 71860186 71861177 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101784.1 MGP_BALBcJ_G0039728.1 mouse_genomes_project X 2722959 2723779 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0016778.1 MGP_BALBcJ_G0014875.1 mouse_genomes_project X 146636986 146637142 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016715.1 MGP_BALBcJ_G0014812.1 mouse_genomes_project X 135324252 135325233 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011092.1 MGP_BALBcJ_G0009217.1 mouse_genomes_project X 1827351 1827443 - Mir500 miRNA miRNA MGP_BALBcJ_T0011162.1 MGP_BALBcJ_G0009287.1 mouse_genomes_project X 69328185 69328253 + Mir7092 miRNA miRNA MGP_BALBcJ_T0096806.1 MGP_BALBcJ_G0035856.1 mouse_genomes_project X 80786794 80810458 + MGP_BALBcJ_P0096806 5430427O19Rik protein_coding protein_coding MGP_BALBcJ_T0097609.1 MGP_BALBcJ_G0036109.1 mouse_genomes_project X 136290441 136297831 + MGP_BALBcJ_P0097609 protein_coding protein_coding MGP_BALBcJ_T0097103.1 MGP_BALBcJ_G0035941.1 mouse_genomes_project X 97462550 97467069 - MGP_BALBcJ_P0097103 Rps4x protein_coding unknown_likely_coding MGP_BALBcJ_T0097104.1 MGP_BALBcJ_G0035941.1 mouse_genomes_project X 97462555 97467133 - MGP_BALBcJ_P0097104 Rps4x protein_coding protein_coding MGP_BALBcJ_T0097105.1 MGP_BALBcJ_G0035941.1 mouse_genomes_project X 97462688 97464465 - Rps4x protein_coding retained_intron MGP_BALBcJ_T0097106.1 MGP_BALBcJ_G0035941.1 mouse_genomes_project X 97465354 97467075 - Rps4x protein_coding retained_intron MGP_BALBcJ_T0096653.1 MGP_BALBcJ_G0035814.1 mouse_genomes_project X 69422707 69442746 - MGP_BALBcJ_P0096653 G6pdx protein_coding protein_coding MGP_BALBcJ_T0096654.1 MGP_BALBcJ_G0035814.1 mouse_genomes_project X 69424083 69442428 - MGP_BALBcJ_P0096654 G6pdx protein_coding protein_coding MGP_BALBcJ_T0096655.1 MGP_BALBcJ_G0035814.1 mouse_genomes_project X 69427028 69442401 - G6pdx protein_coding processed_transcript MGP_BALBcJ_T0096662.1 MGP_BALBcJ_G0035814.1 mouse_genomes_project X 69441238 69442432 - G6pdx protein_coding retained_intron MGP_BALBcJ_T0097602.1 MGP_BALBcJ_G0036105.1 mouse_genomes_project X 136058604 136063732 - MGP_BALBcJ_P0097602 Tex13 protein_coding protein_coding MGP_BALBcJ_T0097603.1 MGP_BALBcJ_G0036105.1 mouse_genomes_project X 136059565 136061151 - Tex13 protein_coding retained_intron MGP_BALBcJ_T0097870.1 MGP_BALBcJ_G0036170.1 mouse_genomes_project X 149672355 149675036 + MGP_BALBcJ_P0097870 Samt4 protein_coding protein_coding MGP_BALBcJ_T0016480.1 MGP_BALBcJ_G0014577.1 mouse_genomes_project X 89543256 89543957 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101518.1 MGP_BALBcJ_G0039554.1 mouse_genomes_project X 37379461 37379591 - Gm23705 snoRNA snoRNA MGP_BALBcJ_T0097843.1 MGP_BALBcJ_G0036156.1 mouse_genomes_project X 147939627 147953488 + Gpr143 protein_coding processed_transcript MGP_BALBcJ_T0097844.1 MGP_BALBcJ_G0036156.1 mouse_genomes_project X 147939692 147965819 + MGP_BALBcJ_P0097844 Gpr143 protein_coding protein_coding MGP_BALBcJ_T0097845.1 MGP_BALBcJ_G0036156.1 mouse_genomes_project X 147939724 147948579 + Gpr143 protein_coding retained_intron MGP_BALBcJ_T0016758.1 MGP_BALBcJ_G0014855.1 mouse_genomes_project X 140914683 140915501 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018648.1 MGP_BALBcJ_G0015736.1 mouse_genomes_project X 157967056 157968592 - Gm15201 processed_transcript processed_transcript MGP_BALBcJ_T0016786.1 MGP_BALBcJ_G0014883.1 mouse_genomes_project X 148401310 148401584 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011206.1 MGP_BALBcJ_G0009331.1 mouse_genomes_project X 162291058 162291167 - Gm22368 miRNA miRNA MGP_BALBcJ_T0016705.1 MGP_BALBcJ_G0014802.1 mouse_genomes_project X 133310485 133310692 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016720.1 MGP_BALBcJ_G0014817.1 mouse_genomes_project X 136435992 136436353 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097987.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156374777 156516753 + MGP_BALBcJ_P0097987 Scml2 protein_coding protein_coding MGP_BALBcJ_T0097988.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156392400 156516739 + MGP_BALBcJ_P0097988 Scml2 protein_coding protein_coding MGP_BALBcJ_T0097989.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156418710 156516805 + MGP_BALBcJ_P0097989 Scml2 protein_coding protein_coding MGP_BALBcJ_T0097990.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156418732 156518066 + MGP_BALBcJ_P0097990 Scml2 protein_coding protein_coding MGP_BALBcJ_T0097991.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156418732 156518049 + MGP_BALBcJ_P0097991 Scml2 protein_coding protein_coding MGP_BALBcJ_T0097992.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156419020 156515274 + MGP_BALBcJ_P0097992 Scml2 protein_coding protein_coding MGP_BALBcJ_T0097993.1 MGP_BALBcJ_G0036199.1 mouse_genomes_project X 156493653 156498946 + Scml2 protein_coding processed_transcript MGP_BALBcJ_T0098697.1 MGP_BALBcJ_G0036751.1 mouse_genomes_project X 131432742 131432861 + n-R5s12 rRNA rRNA MGP_BALBcJ_T0016749.1 MGP_BALBcJ_G0014846.1 mouse_genomes_project X 139614868 139616238 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096210.1 MGP_BALBcJ_G0035719.1 mouse_genomes_project X 52379220 52460917 + MGP_BALBcJ_P0096210 Gm364 protein_coding protein_coding MGP_BALBcJ_T0096808.1 MGP_BALBcJ_G0035858.1 mouse_genomes_project X 81115908 81120178 + MGP_BALBcJ_P0096808 Nr0b1 protein_coding protein_coding MGP_BALBcJ_T0102870.1 MGP_BALBcJ_G0040685.1 mouse_genomes_project X 81330195 81331227 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016593.1 MGP_BALBcJ_G0014690.1 mouse_genomes_project X 107259870 107260601 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096097.1 MGP_BALBcJ_G0035676.1 mouse_genomes_project X 45037627 45038626 - MGP_BALBcJ_P0096097 Olfr1324 protein_coding protein_coding MGP_BALBcJ_T0016301.1 MGP_BALBcJ_G0014398.1 mouse_genomes_project X 51397211 51397634 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011150.1 MGP_BALBcJ_G0009275.1 mouse_genomes_project X 62961636 62961702 - Mir201 miRNA miRNA MGP_BALBcJ_T0016367.1 MGP_BALBcJ_G0014464.1 mouse_genomes_project X 65456226 65456751 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016528.1 MGP_BALBcJ_G0014625.1 mouse_genomes_project X 97927549 97928143 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102872.1 MGP_BALBcJ_G0040687.1 mouse_genomes_project X 84291844 84292898 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016186.1 MGP_BALBcJ_G0014283.1 mouse_genomes_project X 10314624 10314961 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101526.1 MGP_BALBcJ_G0039562.1 mouse_genomes_project X 68756303 68756426 + Gm25226 snoRNA snoRNA MGP_BALBcJ_T0095858.1 MGP_BALBcJ_G0035595.1 mouse_genomes_project X 31555641 31596864 - MGP_BALBcJ_P0095858 C330007P06Rik protein_coding protein_coding MGP_BALBcJ_T0095859.1 MGP_BALBcJ_G0035595.1 mouse_genomes_project X 31571663 31589324 - C330007P06Rik protein_coding retained_intron MGP_BALBcJ_T0095860.1 MGP_BALBcJ_G0035595.1 mouse_genomes_project X 31580548 31596758 - MGP_BALBcJ_P0095860 C330007P06Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0096278.1 MGP_BALBcJ_G0035746.1 mouse_genomes_project X 65288865 65311640 - MGP_BALBcJ_P0096278 Ids protein_coding protein_coding MGP_BALBcJ_T0096279.1 MGP_BALBcJ_G0035746.1 mouse_genomes_project X 65297627 65307646 - MGP_BALBcJ_P0096279 Ids protein_coding protein_coding MGP_BALBcJ_T0101539.1 MGP_BALBcJ_G0039575.1 mouse_genomes_project X 96385590 96385710 - Gm24061 snoRNA snoRNA MGP_BALBcJ_T0100271.1 MGP_BALBcJ_G0038307.1 mouse_genomes_project X 96245636 96245699 + Gm24577 snRNA snRNA MGP_BALBcJ_T0097502.1 MGP_BALBcJ_G0036076.1 mouse_genomes_project X 132065832 132076441 - MGP_BALBcJ_P0097502 Rab9b protein_coding protein_coding MGP_BALBcJ_T0096378.1 MGP_BALBcJ_G0035778.1 mouse_genomes_project X 68501725 68570242 + MGP_BALBcJ_P0096378 Atp2b3 protein_coding protein_coding MGP_BALBcJ_T0096379.1 MGP_BALBcJ_G0035778.1 mouse_genomes_project X 68501725 68557449 + MGP_BALBcJ_P0096379 Atp2b3 protein_coding protein_coding MGP_BALBcJ_T0096380.1 MGP_BALBcJ_G0035778.1 mouse_genomes_project X 68501725 68570242 + MGP_BALBcJ_P0096380 Atp2b3 protein_coding protein_coding MGP_BALBcJ_T0096695.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70171107 70192100 - MGP_BALBcJ_P0096695 Mpp1 protein_coding protein_coding MGP_BALBcJ_T0096696.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70172022 70191928 - MGP_BALBcJ_P0096696 Mpp1 protein_coding protein_coding MGP_BALBcJ_T0096697.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70173090 70192033 - MGP_BALBcJ_P0096697 Mpp1 protein_coding protein_coding MGP_BALBcJ_T0096698.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70173727 70191938 - MGP_BALBcJ_P0096698 Mpp1 protein_coding protein_coding MGP_BALBcJ_T0096699.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70174939 70191938 - Mpp1 protein_coding processed_transcript MGP_BALBcJ_T0096700.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70177209 70179222 - Mpp1 protein_coding retained_intron MGP_BALBcJ_T0096701.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70177435 70191938 - MGP_BALBcJ_P0096701 Mpp1 protein_coding protein_coding MGP_BALBcJ_T0096702.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70182845 70191938 - MGP_BALBcJ_P0096702 Mpp1 protein_coding protein_coding MGP_BALBcJ_T0096703.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70184079 70192070 - Mpp1 protein_coding retained_intron MGP_BALBcJ_T0096704.1 MGP_BALBcJ_G0035823.1 mouse_genomes_project X 70186902 70192037 - MGP_BALBcJ_P0096704 Mpp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096978.1 MGP_BALBcJ_G0035912.1 mouse_genomes_project X 95837252 95841960 - MGP_BALBcJ_P0096978 P2ry4 protein_coding protein_coding MGP_BALBcJ_T0096251.1 MGP_BALBcJ_G0035737.1 mouse_genomes_project X 61367900 61368764 - MGP_BALBcJ_P0096251 4930447F04Rik protein_coding protein_coding MGP_BALBcJ_T0016703.1 MGP_BALBcJ_G0014800.1 mouse_genomes_project X 132450811 132453966 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016706.1 MGP_BALBcJ_G0014803.1 mouse_genomes_project X 133739380 133740623 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011760.1 MGP_BALBcJ_G0009885.1 mouse_genomes_project X 135884639 135884941 - Gm22025 misc_RNA misc_RNA MGP_BALBcJ_T0095557.1 MGP_BALBcJ_G0035503.1 mouse_genomes_project X 2506630 2511443 - MGP_BALBcJ_P0095557 Pqbp1 protein_coding protein_coding MGP_BALBcJ_T0095558.1 MGP_BALBcJ_G0035503.1 mouse_genomes_project X 2506694 2511153 - MGP_BALBcJ_P0095558 Pqbp1 protein_coding protein_coding MGP_BALBcJ_T0095559.1 MGP_BALBcJ_G0035503.1 mouse_genomes_project X 2506822 2511373 - MGP_BALBcJ_P0095559 Pqbp1 protein_coding protein_coding MGP_BALBcJ_T0095560.1 MGP_BALBcJ_G0035503.1 mouse_genomes_project X 2506905 2511174 - MGP_BALBcJ_P0095560 Pqbp1 protein_coding protein_coding MGP_BALBcJ_T0095561.1 MGP_BALBcJ_G0035503.1 mouse_genomes_project X 2508044 2511070 - MGP_BALBcJ_P0095561 Pqbp1 protein_coding protein_coding MGP_BALBcJ_T0102890.1 MGP_BALBcJ_G0040705.1 mouse_genomes_project X 149380950 149381433 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0095854.1 MGP_BALBcJ_G0035593.1 mouse_genomes_project X 31474781 31508435 + MGP_BALBcJ_P0095854 Slc25a43 protein_coding protein_coding MGP_BALBcJ_T0095855.1 MGP_BALBcJ_G0035593.1 mouse_genomes_project X 31474833 31507518 + Slc25a43 protein_coding processed_transcript MGP_BALBcJ_T0011127.1 MGP_BALBcJ_G0009252.1 mouse_genomes_project X 47681390 47681461 - Mir503 miRNA miRNA MGP_BALBcJ_T0011202.1 MGP_BALBcJ_G0009327.1 mouse_genomes_project X 147046105 147046213 + Mir98 miRNA miRNA MGP_BALBcJ_T0096179.1 MGP_BALBcJ_G0035711.1 mouse_genomes_project X 51761919 51786768 - MGP_BALBcJ_P0096179 Mtap7d3 protein_coding protein_coding MGP_BALBcJ_T0096180.1 MGP_BALBcJ_G0035711.1 mouse_genomes_project X 51773993 51786756 - MGP_BALBcJ_P0096180 Mtap7d3 protein_coding protein_coding MGP_BALBcJ_T0097139.1 MGP_BALBcJ_G0035953.1 mouse_genomes_project X 98700761 98709955 + MGP_BALBcJ_P0097139 Cdx4 protein_coding protein_coding MGP_BALBcJ_T0009370.1 MGP_BALBcJ_G0007520.1 mouse_genomes_project X 80743995 80745766 + Gm14762 lincRNA lincRNA MGP_BALBcJ_T0009371.1 MGP_BALBcJ_G0007520.1 mouse_genomes_project X 80744764 80752870 + Gm14762 lincRNA lincRNA MGP_BALBcJ_T0102855.1 MGP_BALBcJ_G0040670.1 mouse_genomes_project X 48320802 48325177 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016471.1 MGP_BALBcJ_G0014568.1 mouse_genomes_project X 87771033 87772593 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096947.1 MGP_BALBcJ_G0035902.1 mouse_genomes_project X 94253018 94315773 + MGP_BALBcJ_P0096947 Stard8 protein_coding protein_coding MGP_BALBcJ_T0096948.1 MGP_BALBcJ_G0035902.1 mouse_genomes_project X 94292583 94324831 + MGP_BALBcJ_P0096948 Stard8 protein_coding protein_coding MGP_BALBcJ_T0096949.1 MGP_BALBcJ_G0035902.1 mouse_genomes_project X 94293925 94315924 + Stard8 protein_coding processed_transcript MGP_BALBcJ_T0096950.1 MGP_BALBcJ_G0035902.1 mouse_genomes_project X 94318707 94320544 + Stard8 protein_coding processed_transcript MGP_BALBcJ_T0095898.1 MGP_BALBcJ_G0035616.1 mouse_genomes_project X 32289309 32305572 + MGP_BALBcJ_P0095898 protein_coding protein_coding MGP_BALBcJ_T0016658.1 MGP_BALBcJ_G0014755.1 mouse_genomes_project X 123249189 123249853 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016673.1 MGP_BALBcJ_G0014770.1 mouse_genomes_project X 128047856 128048644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016735.1 MGP_BALBcJ_G0014832.1 mouse_genomes_project X 137347264 137347522 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005575.1 MGP_BALBcJ_G0004701.1 mouse_genomes_project X 91531158 91534869 + F630028O10Rik antisense antisense MGP_BALBcJ_T0005576.1 MGP_BALBcJ_G0004701.1 mouse_genomes_project X 91531198 91534869 + F630028O10Rik antisense antisense MGP_BALBcJ_T0098701.1 MGP_BALBcJ_G0036755.1 mouse_genomes_project X 150825512 150825631 + n-R5s16 rRNA rRNA MGP_BALBcJ_T0097339.1 MGP_BALBcJ_G0036026.1 mouse_genomes_project X 123335315 123337179 + MGP_BALBcJ_P0097339 Rbm31y protein_coding protein_coding MGP_BALBcJ_T0097874.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150482659 150485969 - MGP_BALBcJ_P0097874 Sat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097875.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150482659 150485969 - MGP_BALBcJ_P0097875 Sat1 protein_coding protein_coding MGP_BALBcJ_T0097876.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150482833 150485852 - Sat1 protein_coding retained_intron MGP_BALBcJ_T0097877.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150482833 150484424 - Sat1 protein_coding retained_intron MGP_BALBcJ_T0097878.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150482833 150483587 - Sat1 protein_coding retained_intron MGP_BALBcJ_T0097879.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150482842 150485865 - MGP_BALBcJ_P0097879 Sat1 protein_coding protein_coding MGP_BALBcJ_T0097880.1 MGP_BALBcJ_G0036174.1 mouse_genomes_project X 150484974 150485847 - Sat1 protein_coding retained_intron MGP_BALBcJ_T0011744.1 MGP_BALBcJ_G0009869.1 mouse_genomes_project X 98847862 98847988 - Gm27927 misc_RNA misc_RNA MGP_BALBcJ_T0016161.1 MGP_BALBcJ_G0014258.1 mouse_genomes_project X 5453461 5453894 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005580.1 MGP_BALBcJ_G0004705.1 mouse_genomes_project X 98810778 98862687 + Tsix antisense antisense MGP_BALBcJ_T0097496.1 MGP_BALBcJ_G0036074.1 mouse_genomes_project X 131965041 131987133 - MGP_BALBcJ_P0097496 Glra4 protein_coding protein_coding MGP_BALBcJ_T0097497.1 MGP_BALBcJ_G0036074.1 mouse_genomes_project X 131974372 131987133 - Glra4 protein_coding retained_intron MGP_BALBcJ_T0016812.1 MGP_BALBcJ_G0014909.1 mouse_genomes_project X 152936563 152936784 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016518.1 MGP_BALBcJ_G0014615.1 mouse_genomes_project X 96742390 96742602 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016692.1 MGP_BALBcJ_G0014789.1 mouse_genomes_project X 131759666 131760296 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011131.1 MGP_BALBcJ_G0009256.1 mouse_genomes_project X 54635904 54636001 - Gm44500 miRNA miRNA MGP_BALBcJ_T0097893.1 MGP_BALBcJ_G0036179.1 mouse_genomes_project X 152416195 152676162 - MGP_BALBcJ_P0097893 Phex protein_coding protein_coding MGP_BALBcJ_T0097894.1 MGP_BALBcJ_G0036179.1 mouse_genomes_project X 152419695 152664141 - MGP_BALBcJ_P0097894 Phex protein_coding protein_coding MGP_BALBcJ_T0097895.1 MGP_BALBcJ_G0036179.1 mouse_genomes_project X 152481115 152676188 - MGP_BALBcJ_P0097895 Phex protein_coding protein_coding MGP_BALBcJ_T0095737.1 MGP_BALBcJ_G0035558.1 mouse_genomes_project X 14815495 15019240 - MGP_BALBcJ_P0095737 Slc9a7 protein_coding protein_coding MGP_BALBcJ_T0095738.1 MGP_BALBcJ_G0035558.1 mouse_genomes_project X 14815703 15019117 - MGP_BALBcJ_P0095738 Slc9a7 protein_coding unknown_likely_coding MGP_BALBcJ_T0095739.1 MGP_BALBcJ_G0035558.1 mouse_genomes_project X 14815703 15018958 - MGP_BALBcJ_P0095739 Slc9a7 protein_coding unknown_likely_coding MGP_BALBcJ_T0095740.1 MGP_BALBcJ_G0035558.1 mouse_genomes_project X 14829100 15019219 - Slc9a7 protein_coding retained_intron MGP_BALBcJ_T0095741.1 MGP_BALBcJ_G0035558.1 mouse_genomes_project X 14864117 15019203 - MGP_BALBcJ_P0095741 Slc9a7 protein_coding protein_coding MGP_BALBcJ_T0095742.1 MGP_BALBcJ_G0035558.1 mouse_genomes_project X 14876338 15019240 - Slc9a7 protein_coding retained_intron MGP_BALBcJ_T0097471.1 MGP_BALBcJ_G0036063.1 mouse_genomes_project X 131321140 131324408 - MGP_BALBcJ_P0097471 Tceal8 protein_coding protein_coding MGP_BALBcJ_T0097472.1 MGP_BALBcJ_G0036063.1 mouse_genomes_project X 131322237 131324499 - MGP_BALBcJ_P0097472 Tceal8 protein_coding protein_coding MGP_BALBcJ_T0097473.1 MGP_BALBcJ_G0036063.1 mouse_genomes_project X 131323041 131324373 - MGP_BALBcJ_P0097473 Tceal8 protein_coding protein_coding MGP_BALBcJ_T0097474.1 MGP_BALBcJ_G0036063.1 mouse_genomes_project X 131323145 131324358 - MGP_BALBcJ_P0097474 Tceal8 protein_coding protein_coding MGP_BALBcJ_T0016731.1 MGP_BALBcJ_G0014828.1 mouse_genomes_project X 137115261 137117408 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098084.1 MGP_BALBcJ_G0036223.1 mouse_genomes_project X 160241751 160261385 + MGP_BALBcJ_P0098084 Fancb protein_coding protein_coding MGP_BALBcJ_T0098085.1 MGP_BALBcJ_G0036223.1 mouse_genomes_project X 160241751 160261385 + MGP_BALBcJ_P0098085 Fancb protein_coding protein_coding MGP_BALBcJ_T0098086.1 MGP_BALBcJ_G0036223.1 mouse_genomes_project X 160241871 160261388 + MGP_BALBcJ_P0098086 Fancb protein_coding protein_coding MGP_BALBcJ_T0016139.1 MGP_BALBcJ_G0014236.1 mouse_genomes_project X 477165 478986 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011124.1 MGP_BALBcJ_G0009249.1 mouse_genomes_project X 47675677 47675746 - Mir450-2 miRNA miRNA MGP_BALBcJ_T0016505.1 MGP_BALBcJ_G0014602.1 mouse_genomes_project X 93765207 93765695 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096818.1 MGP_BALBcJ_G0035865.1 mouse_genomes_project X 86619012 86620047 + MGP_BALBcJ_P0096818 protein_coding protein_coding MGP_BALBcJ_T0016583.1 MGP_BALBcJ_G0014680.1 mouse_genomes_project X 104284420 104284576 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016400.1 MGP_BALBcJ_G0014497.1 mouse_genomes_project X 72344845 72346160 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095796.1 MGP_BALBcJ_G0035571.1 mouse_genomes_project X 15685408 15702622 - MGP_BALBcJ_P0095796 Elk1 protein_coding protein_coding MGP_BALBcJ_T0095797.1 MGP_BALBcJ_G0035571.1 mouse_genomes_project X 15691734 15702622 - Elk1 protein_coding retained_intron MGP_BALBcJ_T0096016.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42462958 42538724 - MGP_BALBcJ_P0096016 Smarca1 protein_coding protein_coding MGP_BALBcJ_T0096017.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42462960 42538724 - MGP_BALBcJ_P0096017 Smarca1 protein_coding protein_coding MGP_BALBcJ_T0096018.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42463223 42538757 - MGP_BALBcJ_P0096018 Smarca1 protein_coding protein_coding MGP_BALBcJ_T0096019.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42492795 42538601 - MGP_BALBcJ_P0096019 Smarca1 protein_coding protein_coding MGP_BALBcJ_T0096020.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42517546 42538637 - MGP_BALBcJ_P0096020 Smarca1 protein_coding protein_coding MGP_BALBcJ_T0096021.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42533369 42539146 - MGP_BALBcJ_P0096021 Smarca1 protein_coding protein_coding MGP_BALBcJ_T0096022.1 MGP_BALBcJ_G0035653.1 mouse_genomes_project X 42536030 42539179 - Smarca1 protein_coding processed_transcript MGP_BALBcJ_T0102888.1 MGP_BALBcJ_G0040703.1 mouse_genomes_project X 147247965 147248972 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016452.1 MGP_BALBcJ_G0014549.1 mouse_genomes_project X 84111478 84112958 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095792.1 MGP_BALBcJ_G0035569.1 mouse_genomes_project X 15619856 15624424 + MGP_BALBcJ_P0095792 Timp1 protein_coding protein_coding MGP_BALBcJ_T0095793.1 MGP_BALBcJ_G0035569.1 mouse_genomes_project X 15619911 15624426 + MGP_BALBcJ_P0095793 Timp1 protein_coding protein_coding MGP_BALBcJ_T0097398.1 MGP_BALBcJ_G0036042.1 mouse_genomes_project X 129572280 129578739 - MGP_BALBcJ_P0097398 protein_coding protein_coding MGP_BALBcJ_T0096931.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93809873 94139630 - MGP_BALBcJ_P0096931 Ophn1 protein_coding protein_coding MGP_BALBcJ_T0096932.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93814389 94139426 - MGP_BALBcJ_P0096932 Ophn1 protein_coding protein_coding MGP_BALBcJ_T0096933.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93814395 93834609 - MGP_BALBcJ_P0096933 Ophn1 protein_coding protein_coding MGP_BALBcJ_T0096934.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93819706 93834555 - Ophn1 protein_coding processed_transcript MGP_BALBcJ_T0096935.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93962383 94139670 - Ophn1 protein_coding retained_intron MGP_BALBcJ_T0096936.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93962611 94139630 - Ophn1 protein_coding retained_intron MGP_BALBcJ_T0096937.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 93981953 94139630 - MGP_BALBcJ_P0096937 Ophn1 protein_coding protein_coding MGP_BALBcJ_T0096938.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 94046172 94139254 - Ophn1 protein_coding retained_intron MGP_BALBcJ_T0096939.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 94122837 94139029 - Ophn1 protein_coding processed_transcript MGP_BALBcJ_T0096940.1 MGP_BALBcJ_G0035900.1 mouse_genomes_project X 94136406 94139270 - Ophn1 protein_coding retained_intron MGP_BALBcJ_T0016814.1 MGP_BALBcJ_G0014911.1 mouse_genomes_project X 153444816 153447461 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097857.1 MGP_BALBcJ_G0036164.1 mouse_genomes_project X 148744318 148745149 + MGP_BALBcJ_P0097857 Cypt3 protein_coding protein_coding MGP_BALBcJ_T0097858.1 MGP_BALBcJ_G0036164.1 mouse_genomes_project X 148744318 148745155 + MGP_BALBcJ_P0097858 Cypt3 protein_coding protein_coding MGP_BALBcJ_T0097621.1 MGP_BALBcJ_G0036115.1 mouse_genomes_project X 137219934 137330061 - MGP_BALBcJ_P0097621 Gucy2f protein_coding protein_coding MGP_BALBcJ_T0097155.1 MGP_BALBcJ_G0035962.1 mouse_genomes_project X 99868554 99893273 + MGP_BALBcJ_P0097155 Uprt protein_coding protein_coding MGP_BALBcJ_T0101544.1 MGP_BALBcJ_G0039580.1 mouse_genomes_project X 114476111 114476227 - Gm26182 snoRNA snoRNA MGP_BALBcJ_T0098074.1 MGP_BALBcJ_G0036221.1 mouse_genomes_project X 159772795 159807693 + MGP_BALBcJ_P0098074 Asb9 protein_coding protein_coding MGP_BALBcJ_T0016372.1 MGP_BALBcJ_G0014469.1 mouse_genomes_project X 65714656 65715261 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016409.1 MGP_BALBcJ_G0014506.1 mouse_genomes_project X 73686865 73687237 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097869.1 MGP_BALBcJ_G0036169.1 mouse_genomes_project X 149580384 149584286 + MGP_BALBcJ_P0097869 protein_coding protein_coding MGP_BALBcJ_T0018602.1 MGP_BALBcJ_G0015722.1 mouse_genomes_project X 96540204 96565705 + Gm21986 processed_transcript processed_transcript MGP_BALBcJ_T0098780.1 MGP_BALBcJ_G0036834.1 mouse_genomes_project X 116305941 116306062 - Gm25825 scaRNA scaRNA MGP_BALBcJ_T0005556.1 MGP_BALBcJ_G0004684.1 mouse_genomes_project X 43968130 44077663 - Gm14697 antisense antisense MGP_BALBcJ_T0098151.1 MGP_BALBcJ_G0036241.1 mouse_genomes_project X 164551250 164617792 - MGP_BALBcJ_P0098151 Hccs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098152.1 MGP_BALBcJ_G0036241.1 mouse_genomes_project X 164608949 164617700 - MGP_BALBcJ_P0098152 Hccs protein_coding protein_coding MGP_BALBcJ_T0098153.1 MGP_BALBcJ_G0036241.1 mouse_genomes_project X 164608949 164617714 - MGP_BALBcJ_P0098153 Hccs protein_coding protein_coding MGP_BALBcJ_T0097685.1 MGP_BALBcJ_G0036132.1 mouse_genomes_project X 142473064 142518227 - MGP_BALBcJ_P0097685 Il13ra2 protein_coding protein_coding MGP_BALBcJ_T0097686.1 MGP_BALBcJ_G0036132.1 mouse_genomes_project X 142473066 142493345 - MGP_BALBcJ_P0097686 Il13ra2 protein_coding protein_coding MGP_BALBcJ_T0016159.1 MGP_BALBcJ_G0014256.1 mouse_genomes_project X 3727827 3729410 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095699.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8319322 8602273 - MGP_BALBcJ_P0095699 Cask protein_coding unknown_likely_coding MGP_BALBcJ_T0095700.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8319326 8653696 - MGP_BALBcJ_P0095700 Cask protein_coding protein_coding MGP_BALBcJ_T0095701.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8319326 8592174 - MGP_BALBcJ_P0095701 Cask protein_coding protein_coding MGP_BALBcJ_T0095702.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8319326 8653659 - MGP_BALBcJ_P0095702 Cask protein_coding protein_coding MGP_BALBcJ_T0095703.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8323570 8653674 - MGP_BALBcJ_P0095703 Cask protein_coding protein_coding MGP_BALBcJ_T0095704.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8324021 8329008 - MGP_BALBcJ_P0095704 Cask protein_coding protein_coding MGP_BALBcJ_T0095705.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8324319 8339893 - MGP_BALBcJ_P0095705 Cask protein_coding protein_coding MGP_BALBcJ_T0095706.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8335563 8361913 - MGP_BALBcJ_P0095706 Cask protein_coding protein_coding MGP_BALBcJ_T0095707.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8357177 8653696 - Cask protein_coding retained_intron MGP_BALBcJ_T0095708.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8373684 8485298 - MGP_BALBcJ_P0095708 Cask protein_coding protein_coding MGP_BALBcJ_T0095709.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8433548 8652909 - MGP_BALBcJ_P0095709 Cask protein_coding protein_coding MGP_BALBcJ_T0095713.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8521849 8658485 - Cask protein_coding processed_transcript MGP_BALBcJ_T0095714.1 MGP_BALBcJ_G0035544.1 mouse_genomes_project X 8652910 8653853 - Cask protein_coding processed_transcript MGP_BALBcJ_T0016722.1 MGP_BALBcJ_G0014819.1 mouse_genomes_project X 136580488 136580704 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016631.1 MGP_BALBcJ_G0014728.1 mouse_genomes_project X 112910842 112911046 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016805.1 MGP_BALBcJ_G0014902.1 mouse_genomes_project X 152690630 152691540 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016276.1 MGP_BALBcJ_G0014373.1 mouse_genomes_project X 44201957 44202216 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096089.1 MGP_BALBcJ_G0035673.1 mouse_genomes_project X 44396898 44402612 - MGP_BALBcJ_P0096089 Igsf1 protein_coding protein_coding MGP_BALBcJ_T0096090.1 MGP_BALBcJ_G0035673.1 mouse_genomes_project X 44396898 44412236 - MGP_BALBcJ_P0096090 Igsf1 protein_coding protein_coding MGP_BALBcJ_T0096091.1 MGP_BALBcJ_G0035673.1 mouse_genomes_project X 44396907 44412353 - MGP_BALBcJ_P0096091 Igsf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0096092.1 MGP_BALBcJ_G0035673.1 mouse_genomes_project X 44400712 44409852 - MGP_BALBcJ_P0096092 Igsf1 protein_coding protein_coding MGP_BALBcJ_T0096093.1 MGP_BALBcJ_G0035673.1 mouse_genomes_project X 44407453 44412236 - MGP_BALBcJ_P0096093 Igsf1 protein_coding protein_coding MGP_BALBcJ_T0096094.1 MGP_BALBcJ_G0035673.1 mouse_genomes_project X 44409432 44412222 - Igsf1 protein_coding processed_transcript MGP_BALBcJ_T0016506.1 MGP_BALBcJ_G0014603.1 mouse_genomes_project X 93799519 93800005 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016804.1 MGP_BALBcJ_G0014901.1 mouse_genomes_project X 152638158 152639204 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100303.1 MGP_BALBcJ_G0038339.1 mouse_genomes_project X 157352924 157353028 + Gm23794 snRNA snRNA MGP_BALBcJ_T0097625.1 MGP_BALBcJ_G0036117.1 mouse_genomes_project X 137436175 137437718 - MGP_BALBcJ_P0097625 Kcne1l protein_coding protein_coding MGP_BALBcJ_T0097650.1 MGP_BALBcJ_G0036125.1 mouse_genomes_project X 138977801 139054170 - MGP_BALBcJ_P0097650 Dcx protein_coding protein_coding MGP_BALBcJ_T0097651.1 MGP_BALBcJ_G0036125.1 mouse_genomes_project X 138982675 139054063 - MGP_BALBcJ_P0097651 Dcx protein_coding protein_coding MGP_BALBcJ_T0097652.1 MGP_BALBcJ_G0036125.1 mouse_genomes_project X 138983757 139053983 - MGP_BALBcJ_P0097652 Dcx protein_coding protein_coding MGP_BALBcJ_T0097653.1 MGP_BALBcJ_G0036125.1 mouse_genomes_project X 138985440 139054078 - MGP_BALBcJ_P0097653 Dcx protein_coding protein_coding MGP_BALBcJ_T0097654.1 MGP_BALBcJ_G0036125.1 mouse_genomes_project X 138991177 139053909 - Dcx protein_coding retained_intron MGP_BALBcJ_T0097655.1 MGP_BALBcJ_G0036125.1 mouse_genomes_project X 138995715 139053978 - Dcx protein_coding retained_intron MGP_BALBcJ_T0016137.1 MGP_BALBcJ_G0014234.1 mouse_genomes_project X 289335 291434 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098154.1 MGP_BALBcJ_G0036242.1 mouse_genomes_project X 165063061 165066530 - MGP_BALBcJ_P0098154 4933400A11Rik protein_coding protein_coding MGP_BALBcJ_T0098155.1 MGP_BALBcJ_G0036242.1 mouse_genomes_project X 165063182 165066573 - MGP_BALBcJ_P0098155 4933400A11Rik protein_coding protein_coding MGP_BALBcJ_T0098156.1 MGP_BALBcJ_G0036242.1 mouse_genomes_project X 165063229 165066495 - MGP_BALBcJ_P0098156 4933400A11Rik protein_coding protein_coding MGP_BALBcJ_T0095775.1 MGP_BALBcJ_G0035566.1 mouse_genomes_project X 15427920 15444132 + MGP_BALBcJ_P0095775 Usp11 protein_coding protein_coding MGP_BALBcJ_T0095776.1 MGP_BALBcJ_G0035566.1 mouse_genomes_project X 15427948 15437168 + Usp11 protein_coding processed_transcript MGP_BALBcJ_T0095777.1 MGP_BALBcJ_G0035566.1 mouse_genomes_project X 15427974 15441278 + Usp11 protein_coding retained_intron MGP_BALBcJ_T0095778.1 MGP_BALBcJ_G0035566.1 mouse_genomes_project X 15435839 15444130 + Usp11 protein_coding retained_intron MGP_BALBcJ_T0096399.1 MGP_BALBcJ_G0035783.1 mouse_genomes_project X 68718763 68742021 + MGP_BALBcJ_P0096399 Abcd1 protein_coding protein_coding MGP_BALBcJ_T0096400.1 MGP_BALBcJ_G0035783.1 mouse_genomes_project X 68718906 68733598 + MGP_BALBcJ_P0096400 Abcd1 protein_coding protein_coding MGP_BALBcJ_T0100306.1 MGP_BALBcJ_G0038342.1 mouse_genomes_project X 158623692 158623812 - Gm26007 snRNA snRNA MGP_BALBcJ_T0097259.1 MGP_BALBcJ_G0035992.1 mouse_genomes_project X 104490321 104557889 + MGP_BALBcJ_P0097259 Sh3bgrl protein_coding protein_coding MGP_BALBcJ_T0097260.1 MGP_BALBcJ_G0035992.1 mouse_genomes_project X 104490465 104590059 + Sh3bgrl protein_coding processed_transcript MGP_BALBcJ_T0097261.1 MGP_BALBcJ_G0035992.1 mouse_genomes_project X 104508952 104549400 + Sh3bgrl protein_coding processed_transcript MGP_BALBcJ_T0018589.1 MGP_BALBcJ_G0015717.1 mouse_genomes_project X 47682452 47684597 - C430049B03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018590.1 MGP_BALBcJ_G0015717.1 mouse_genomes_project X 47682613 47684567 - C430049B03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018591.1 MGP_BALBcJ_G0015717.1 mouse_genomes_project X 47683176 47684595 - C430049B03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018592.1 MGP_BALBcJ_G0015717.1 mouse_genomes_project X 47683599 47684597 - C430049B03Rik processed_transcript processed_transcript MGP_BALBcJ_T0098037.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159181312 159204415 - MGP_BALBcJ_P0098037 Zrsr2 protein_coding protein_coding MGP_BALBcJ_T0098038.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159184884 159196040 - Zrsr2 protein_coding retained_intron MGP_BALBcJ_T0098039.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159185787 159189317 - Zrsr2 protein_coding retained_intron MGP_BALBcJ_T0098040.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159194762 159196282 - Zrsr2 protein_coding retained_intron MGP_BALBcJ_T0098041.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159196209 159204424 - MGP_BALBcJ_P0098041 Zrsr2 protein_coding protein_coding MGP_BALBcJ_T0098042.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159199417 159203988 - Zrsr2 protein_coding processed_transcript MGP_BALBcJ_T0098043.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159199466 159204378 - MGP_BALBcJ_P0098043 Zrsr2 protein_coding protein_coding MGP_BALBcJ_T0098044.1 MGP_BALBcJ_G0036211.1 mouse_genomes_project X 159202298 159204487 - MGP_BALBcJ_P0098044 Zrsr2 protein_coding protein_coding MGP_BALBcJ_T0102885.1 MGP_BALBcJ_G0040700.1 mouse_genomes_project X 131640178 131642093 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098135.1 MGP_BALBcJ_G0036238.1 mouse_genomes_project X 163955469 163976791 - MGP_BALBcJ_P0098135 Msl3 protein_coding protein_coding MGP_BALBcJ_T0098136.1 MGP_BALBcJ_G0036238.1 mouse_genomes_project X 163958331 163963264 - Msl3 protein_coding retained_intron MGP_BALBcJ_T0098137.1 MGP_BALBcJ_G0036238.1 mouse_genomes_project X 163962935 163975481 - Msl3 protein_coding retained_intron MGP_BALBcJ_T0016299.1 MGP_BALBcJ_G0014396.1 mouse_genomes_project X 51213524 51213701 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095790.1 MGP_BALBcJ_G0035568.1 mouse_genomes_project X 15610002 15673019 - MGP_BALBcJ_P0095790 Syn1 protein_coding protein_coding MGP_BALBcJ_T0095791.1 MGP_BALBcJ_G0035568.1 mouse_genomes_project X 15610006 15672933 - MGP_BALBcJ_P0095791 Syn1 protein_coding protein_coding MGP_BALBcJ_T0097586.1 MGP_BALBcJ_G0036101.1 mouse_genomes_project X 135580466 135676543 + MGP_BALBcJ_P0097586 Frmpd3 protein_coding unknown_likely_coding MGP_BALBcJ_T0097587.1 MGP_BALBcJ_G0036101.1 mouse_genomes_project X 135608269 135634695 + MGP_BALBcJ_P0097587 Frmpd3 protein_coding protein_coding MGP_BALBcJ_T0097588.1 MGP_BALBcJ_G0036101.1 mouse_genomes_project X 135622729 135635340 + MGP_BALBcJ_P0097588 Frmpd3 protein_coding protein_coding MGP_BALBcJ_T0097672.1 MGP_BALBcJ_G0036128.1 mouse_genomes_project X 139815215 140219237 + MGP_BALBcJ_P0097672 Zcchc16 protein_coding protein_coding MGP_BALBcJ_T0097673.1 MGP_BALBcJ_G0036128.1 mouse_genomes_project X 140216326 140218084 + MGP_BALBcJ_P0097673 Zcchc16 protein_coding protein_coding MGP_BALBcJ_T0009391.1 MGP_BALBcJ_G0007530.1 mouse_genomes_project X 100225262 100234245 + lincRNA lincRNA MGP_BALBcJ_T0101569.1 MGP_BALBcJ_G0039605.1 mouse_genomes_project X 164982660 164982779 - Gm25651 snoRNA snoRNA MGP_BALBcJ_T0011766.1 MGP_BALBcJ_G0009891.1 mouse_genomes_project X 158306865 158307121 - Gm23501 misc_RNA misc_RNA MGP_BALBcJ_T0101553.1 MGP_BALBcJ_G0039589.1 mouse_genomes_project X 132397378 132397497 + Gm23679 snoRNA snoRNA MGP_BALBcJ_T0097758.1 MGP_BALBcJ_G0036142.1 mouse_genomes_project X 146220740 146231475 - MGP_BALBcJ_P0097758 Tsr2 protein_coding protein_coding MGP_BALBcJ_T0097759.1 MGP_BALBcJ_G0036142.1 mouse_genomes_project X 146220741 146231475 - MGP_BALBcJ_P0097759 Tsr2 protein_coding protein_coding MGP_BALBcJ_T0097760.1 MGP_BALBcJ_G0036142.1 mouse_genomes_project X 146223127 146231475 - MGP_BALBcJ_P0097760 Tsr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097761.1 MGP_BALBcJ_G0036142.1 mouse_genomes_project X 146223338 146231455 - Tsr2 protein_coding processed_transcript MGP_BALBcJ_T0005589.1 MGP_BALBcJ_G0004710.1 mouse_genomes_project X 153022371 153061699 - Gm15169 antisense antisense MGP_BALBcJ_T0005590.1 MGP_BALBcJ_G0004710.1 mouse_genomes_project X 153046501 153061692 - Gm15169 antisense antisense MGP_BALBcJ_T0016662.1 MGP_BALBcJ_G0014759.1 mouse_genomes_project X 125369697 125370957 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016514.1 MGP_BALBcJ_G0014611.1 mouse_genomes_project X 95832125 95832525 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016416.1 MGP_BALBcJ_G0014513.1 mouse_genomes_project X 75083844 75084546 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016602.1 MGP_BALBcJ_G0014699.1 mouse_genomes_project X 108155908 108156116 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097468.1 MGP_BALBcJ_G0036061.1 mouse_genomes_project X 131214503 131216176 - MGP_BALBcJ_P0097468 Bex2 protein_coding protein_coding MGP_BALBcJ_T0016236.1 MGP_BALBcJ_G0014333.1 mouse_genomes_project X 34475480 34475871 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095717.1 MGP_BALBcJ_G0035548.1 mouse_genomes_project X 11372555 11375232 + MGP_BALBcJ_P0095717 protein_coding protein_coding MGP_BALBcJ_T0097304.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108477003 109002167 + MGP_BALBcJ_P0097304 Dach2 protein_coding protein_coding MGP_BALBcJ_T0097305.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108477015 108997708 + MGP_BALBcJ_P0097305 Dach2 protein_coding protein_coding MGP_BALBcJ_T0097306.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108477069 109001365 + MGP_BALBcJ_P0097306 Dach2 protein_coding protein_coding MGP_BALBcJ_T0097307.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108477745 108917973 + Dach2 protein_coding retained_intron MGP_BALBcJ_T0097308.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108477750 109001674 + MGP_BALBcJ_P0097308 Dach2 protein_coding protein_coding MGP_BALBcJ_T0097309.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108477750 109000047 + MGP_BALBcJ_P0097309 Dach2 protein_coding protein_coding MGP_BALBcJ_T0097310.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108478131 108710040 + Dach2 protein_coding processed_transcript MGP_BALBcJ_T0097311.1 MGP_BALBcJ_G0036009.1 mouse_genomes_project X 108885044 109000047 + Dach2 protein_coding processed_transcript MGP_BALBcJ_T0018600.1 MGP_BALBcJ_G0015720.1 mouse_genomes_project X 68798825 68801205 + Gm14817 processed_transcript processed_transcript MGP_BALBcJ_T0097377.1 MGP_BALBcJ_G0036036.1 mouse_genomes_project X 129209291 129229636 + MGP_BALBcJ_P0097377 Arl13a protein_coding protein_coding MGP_BALBcJ_T0016790.1 MGP_BALBcJ_G0014887.1 mouse_genomes_project X 148967001 148967281 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016519.1 MGP_BALBcJ_G0014616.1 mouse_genomes_project X 96782768 96784029 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016582.1 MGP_BALBcJ_G0014679.1 mouse_genomes_project X 103826491 106818083 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016240.1 MGP_BALBcJ_G0014337.1 mouse_genomes_project X 34747049 34748501 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095562.1 MGP_BALBcJ_G0035504.1 mouse_genomes_project X 2511530 2520362 + MGP_BALBcJ_P0095562 Timm17b protein_coding protein_coding MGP_BALBcJ_T0095563.1 MGP_BALBcJ_G0035504.1 mouse_genomes_project X 2511844 2518341 + MGP_BALBcJ_P0095563 Timm17b protein_coding protein_coding MGP_BALBcJ_T0095564.1 MGP_BALBcJ_G0035504.1 mouse_genomes_project X 2518124 2518981 + Timm17b protein_coding retained_intron MGP_BALBcJ_T0095916.1 MGP_BALBcJ_G0035623.1 mouse_genomes_project X 32589023 32597900 - MGP_BALBcJ_P0095916 Rhox9 protein_coding protein_coding MGP_BALBcJ_T0016768.1 MGP_BALBcJ_G0014865.1 mouse_genomes_project X 142039061 142040058 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098685.1 MGP_BALBcJ_G0036739.1 mouse_genomes_project X 5268044 5268153 + Gm25885 rRNA rRNA MGP_BALBcJ_T0095955.1 MGP_BALBcJ_G0035639.1 mouse_genomes_project X 34593178 34593973 - MGP_BALBcJ_P0095955 Cypt15 protein_coding protein_coding MGP_BALBcJ_T0009403.1 MGP_BALBcJ_G0007539.1 mouse_genomes_project X 136025140 136047730 + Eif2c5 lincRNA lincRNA MGP_BALBcJ_T0098693.1 MGP_BALBcJ_G0036747.1 mouse_genomes_project X 78227496 78227613 + n-R5s9 rRNA rRNA MGP_BALBcJ_T0016730.1 MGP_BALBcJ_G0014827.1 mouse_genomes_project X 137003289 137003545 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101541.1 MGP_BALBcJ_G0039577.1 mouse_genomes_project X 100001545 100001652 + Gm22430 snoRNA snoRNA MGP_BALBcJ_T0095752.1 MGP_BALBcJ_G0035561.1 mouse_genomes_project X 15283175 15295497 + MGP_BALBcJ_P0095752 Rgn protein_coding protein_coding MGP_BALBcJ_T0098691.1 MGP_BALBcJ_G0036745.1 mouse_genomes_project X 66084567 66084685 + n-R5s8 rRNA rRNA MGP_BALBcJ_T0095439.1 MGP_BALBcJ_G0035482.1 mouse_genomes_project X 1657114 1667811 + MGP_BALBcJ_P0095439 Akap4 protein_coding protein_coding MGP_BALBcJ_T0095440.1 MGP_BALBcJ_G0035482.1 mouse_genomes_project X 1657115 1667806 + MGP_BALBcJ_P0095440 Akap4 protein_coding protein_coding MGP_BALBcJ_T0095441.1 MGP_BALBcJ_G0035482.1 mouse_genomes_project X 1657808 1667793 + MGP_BALBcJ_P0095441 Akap4 protein_coding protein_coding MGP_BALBcJ_T0016634.1 MGP_BALBcJ_G0014731.1 mouse_genomes_project X 113255513 113257318 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097498.1 MGP_BALBcJ_G0036075.1 mouse_genomes_project X 132029901 132047621 + MGP_BALBcJ_P0097498 Plp1 protein_coding protein_coding MGP_BALBcJ_T0097499.1 MGP_BALBcJ_G0036075.1 mouse_genomes_project X 132030020 132045404 + MGP_BALBcJ_P0097499 Plp1 protein_coding protein_coding MGP_BALBcJ_T0097500.1 MGP_BALBcJ_G0036075.1 mouse_genomes_project X 132038486 132039917 + Plp1 protein_coding retained_intron MGP_BALBcJ_T0097501.1 MGP_BALBcJ_G0036075.1 mouse_genomes_project X 132040575 132042368 + Plp1 protein_coding retained_intron MGP_BALBcJ_T0097552.1 MGP_BALBcJ_G0036092.1 mouse_genomes_project X 134798554 134909780 + MGP_BALBcJ_P0097552 Rnf128 protein_coding protein_coding MGP_BALBcJ_T0097553.1 MGP_BALBcJ_G0036092.1 mouse_genomes_project X 134847353 134909787 + MGP_BALBcJ_P0097553 Rnf128 protein_coding protein_coding MGP_BALBcJ_T0097554.1 MGP_BALBcJ_G0036092.1 mouse_genomes_project X 134848100 134908383 + Rnf128 protein_coding processed_transcript MGP_BALBcJ_T0016861.1 MGP_BALBcJ_G0014958.1 mouse_genomes_project X 163850569 163850902 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097043.1 MGP_BALBcJ_G0035927.1 mouse_genomes_project X 96628804 96638056 + MGP_BALBcJ_P0097043 Gjb1 protein_coding protein_coding MGP_BALBcJ_T0097044.1 MGP_BALBcJ_G0035927.1 mouse_genomes_project X 96629699 96638056 + MGP_BALBcJ_P0097044 Gjb1 protein_coding protein_coding MGP_BALBcJ_T0097045.1 MGP_BALBcJ_G0035927.1 mouse_genomes_project X 96636162 96638056 + MGP_BALBcJ_P0097045 Gjb1 protein_coding protein_coding MGP_BALBcJ_T0016496.1 MGP_BALBcJ_G0014593.1 mouse_genomes_project X 91515755 91517175 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018593.1 MGP_BALBcJ_G0015718.1 mouse_genomes_project X 48330112 48331590 - processed_transcript TEC MGP_BALBcJ_T0018594.1 MGP_BALBcJ_G0015718.1 mouse_genomes_project X 48331125 48345306 - processed_transcript lincRNA MGP_BALBcJ_T0016524.1 MGP_BALBcJ_G0014621.1 mouse_genomes_project X 97455798 97456272 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016165.1 MGP_BALBcJ_G0014262.1 mouse_genomes_project X 6454767 6454890 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097094.1 MGP_BALBcJ_G0035936.1 mouse_genomes_project X 97339934 97344587 - MGP_BALBcJ_P0097094 Rgag4 protein_coding protein_coding MGP_BALBcJ_T0097095.1 MGP_BALBcJ_G0035936.1 mouse_genomes_project X 97339934 97344695 - MGP_BALBcJ_P0097095 Rgag4 protein_coding protein_coding MGP_BALBcJ_T0097096.1 MGP_BALBcJ_G0035936.1 mouse_genomes_project X 97340124 97340991 - Rgag4 protein_coding processed_transcript MGP_BALBcJ_T0097087.1 MGP_BALBcJ_G0035934.1 mouse_genomes_project X 97070337 97076708 + MGP_BALBcJ_P0097087 protein_coding protein_coding MGP_BALBcJ_T0016484.1 MGP_BALBcJ_G0014581.1 mouse_genomes_project X 89834858 89835336 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095634.1 MGP_BALBcJ_G0035523.1 mouse_genomes_project X 3935796 4004901 + MGP_BALBcJ_P0095634 Lancl3 protein_coding protein_coding MGP_BALBcJ_T0096031.1 MGP_BALBcJ_G0035656.1 mouse_genomes_project X 42767320 42795531 + MGP_BALBcJ_P0096031 Xpnpep2 protein_coding protein_coding MGP_BALBcJ_T0096032.1 MGP_BALBcJ_G0035656.1 mouse_genomes_project X 42767514 42792567 + MGP_BALBcJ_P0096032 Xpnpep2 protein_coding protein_coding MGP_BALBcJ_T0096033.1 MGP_BALBcJ_G0035656.1 mouse_genomes_project X 42767516 42770752 + Xpnpep2 protein_coding processed_transcript MGP_BALBcJ_T0096034.1 MGP_BALBcJ_G0035656.1 mouse_genomes_project X 42767524 42795220 + MGP_BALBcJ_P0096034 Xpnpep2 protein_coding protein_coding MGP_BALBcJ_T0096035.1 MGP_BALBcJ_G0035656.1 mouse_genomes_project X 42786297 42789703 + Xpnpep2 protein_coding processed_transcript MGP_BALBcJ_T0102876.1 MGP_BALBcJ_G0040691.1 mouse_genomes_project X 97960062 97960800 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016601.1 MGP_BALBcJ_G0014698.1 mouse_genomes_project X 108030956 108031431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095678.1 MGP_BALBcJ_G0035538.1 mouse_genomes_project X 7363493 7372274 + Atp6ap2 protein_coding retained_intron MGP_BALBcJ_T0095679.1 MGP_BALBcJ_G0035538.1 mouse_genomes_project X 7363493 7394775 + MGP_BALBcJ_P0095679 Atp6ap2 protein_coding protein_coding MGP_BALBcJ_T0096410.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68782572 68790507 - Idh3g protein_coding retained_intron MGP_BALBcJ_T0096411.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68782572 68790507 - MGP_BALBcJ_P0096411 Idh3g protein_coding protein_coding MGP_BALBcJ_T0096412.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68782652 68784507 - Idh3g protein_coding retained_intron MGP_BALBcJ_T0096413.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68783279 68784306 - Idh3g protein_coding retained_intron MGP_BALBcJ_T0096414.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68783645 68784422 - Idh3g protein_coding retained_intron MGP_BALBcJ_T0096415.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68783683 68790232 - Idh3g protein_coding processed_transcript MGP_BALBcJ_T0096416.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68784030 68785317 - Idh3g protein_coding retained_intron MGP_BALBcJ_T0096417.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68784197 68785829 - Idh3g protein_coding retained_intron MGP_BALBcJ_T0096418.1 MGP_BALBcJ_G0035786.1 mouse_genomes_project X 68784588 68785978 - Idh3g protein_coding processed_transcript MGP_BALBcJ_T0005566.1 MGP_BALBcJ_G0004692.1 mouse_genomes_project X 64878029 65087504 - antisense antisense MGP_BALBcJ_T0016670.1 MGP_BALBcJ_G0014767.1 mouse_genomes_project X 127190028 127190930 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101548.1 MGP_BALBcJ_G0039584.1 mouse_genomes_project X 124121337 124121469 - Gm26029 snoRNA snoRNA MGP_BALBcJ_T0100256.1 MGP_BALBcJ_G0038292.1 mouse_genomes_project X 52941842 52941949 + Gm25023 snRNA snRNA MGP_BALBcJ_T0096154.1 MGP_BALBcJ_G0035704.1 mouse_genomes_project X 51397288 51397643 + MGP_BALBcJ_P0096154 Gm2174 protein_coding protein_coding MGP_BALBcJ_T0016168.1 MGP_BALBcJ_G0014265.1 mouse_genomes_project X 6758166 6758396 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102886.1 MGP_BALBcJ_G0040701.1 mouse_genomes_project X 142833869 142835784 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016461.1 MGP_BALBcJ_G0014558.1 mouse_genomes_project X 86372969 86373344 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100242.1 MGP_BALBcJ_G0038278.1 mouse_genomes_project X 17195217 17195320 + Gm25812 snRNA snRNA MGP_BALBcJ_T0016610.1 MGP_BALBcJ_G0014707.1 mouse_genomes_project X 109623961 109625322 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096675.1 MGP_BALBcJ_G0035819.1 mouse_genomes_project X 69705389 69723884 + MGP_BALBcJ_P0096675 protein_coding protein_coding MGP_BALBcJ_T0016667.1 MGP_BALBcJ_G0014764.1 mouse_genomes_project X 126152074 126153384 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102863.1 MGP_BALBcJ_G0040678.1 mouse_genomes_project X 70022777 70022915 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0095670.1 MGP_BALBcJ_G0035536.1 mouse_genomes_project X 6081251 6081773 + MGP_BALBcJ_P0095670 Gm14501 protein_coding protein_coding MGP_BALBcJ_T0100253.1 MGP_BALBcJ_G0038289.1 mouse_genomes_project X 45019691 45019798 + Gm22288 snRNA snRNA MGP_BALBcJ_T0016732.1 MGP_BALBcJ_G0014829.1 mouse_genomes_project X 137158311 137158569 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011187.1 MGP_BALBcJ_G0009312.1 mouse_genomes_project X 135551078 135551143 + Mir3475 miRNA miRNA MGP_BALBcJ_T0101559.1 MGP_BALBcJ_G0039595.1 mouse_genomes_project X 146676686 146676792 - Gm24460 snoRNA snoRNA MGP_BALBcJ_T0016476.1 MGP_BALBcJ_G0014573.1 mouse_genomes_project X 89155930 89156432 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096337.1 MGP_BALBcJ_G0035760.1 mouse_genomes_project X 66950509 66968726 + MGP_BALBcJ_P0096337 Cnga2 protein_coding protein_coding MGP_BALBcJ_T0096338.1 MGP_BALBcJ_G0035760.1 mouse_genomes_project X 66950515 66960091 + Cnga2 protein_coding processed_transcript MGP_BALBcJ_T0096238.1 MGP_BALBcJ_G0035728.1 mouse_genomes_project X 55836972 55839038 - MGP_BALBcJ_P0096238 Sox3 protein_coding protein_coding MGP_BALBcJ_T0097549.1 MGP_BALBcJ_G0036091.1 mouse_genomes_project X 134715032 134791726 + MGP_BALBcJ_P0097549 D330045A20Rik protein_coding protein_coding MGP_BALBcJ_T0097550.1 MGP_BALBcJ_G0036091.1 mouse_genomes_project X 134715036 134730075 + D330045A20Rik protein_coding processed_transcript MGP_BALBcJ_T0097551.1 MGP_BALBcJ_G0036091.1 mouse_genomes_project X 134715036 134791726 + MGP_BALBcJ_P0097551 D330045A20Rik protein_coding protein_coding MGP_BALBcJ_T0095710.1 MGP_BALBcJ_G0035545.1 mouse_genomes_project X 8439317 8448031 + MGP_BALBcJ_P0095710 Gpr34 protein_coding protein_coding MGP_BALBcJ_T0095711.1 MGP_BALBcJ_G0035545.1 mouse_genomes_project X 8439997 8448033 + MGP_BALBcJ_P0095711 Gpr34 protein_coding protein_coding MGP_BALBcJ_T0005584.1 MGP_BALBcJ_G0004708.1 mouse_genomes_project X 146431711 146489064 - A230072E10Rik antisense antisense MGP_BALBcJ_T0005585.1 MGP_BALBcJ_G0004708.1 mouse_genomes_project X 146432961 146451261 - A230072E10Rik antisense antisense MGP_BALBcJ_T0005586.1 MGP_BALBcJ_G0004708.1 mouse_genomes_project X 146432961 146439028 - A230072E10Rik antisense antisense MGP_BALBcJ_T0005587.1 MGP_BALBcJ_G0004708.1 mouse_genomes_project X 146453188 146486097 - A230072E10Rik antisense antisense MGP_BALBcJ_T0096037.1 MGP_BALBcJ_G0035658.1 mouse_genomes_project X 42833768 42870736 - MGP_BALBcJ_P0096037 Zdhhc9 protein_coding protein_coding MGP_BALBcJ_T0096038.1 MGP_BALBcJ_G0035658.1 mouse_genomes_project X 42833768 42870545 - MGP_BALBcJ_P0096038 Zdhhc9 protein_coding protein_coding MGP_BALBcJ_T0096039.1 MGP_BALBcJ_G0035658.1 mouse_genomes_project X 42843305 42870523 - Zdhhc9 protein_coding retained_intron MGP_BALBcJ_T0096040.1 MGP_BALBcJ_G0035658.1 mouse_genomes_project X 42851893 42870460 - Zdhhc9 protein_coding retained_intron MGP_BALBcJ_T0096041.1 MGP_BALBcJ_G0035658.1 mouse_genomes_project X 42863579 42870186 - Zdhhc9 protein_coding processed_transcript MGP_BALBcJ_T0096042.1 MGP_BALBcJ_G0035658.1 mouse_genomes_project X 42868525 42870516 - Zdhhc9 protein_coding processed_transcript MGP_BALBcJ_T0009351.1 MGP_BALBcJ_G0007505.1 mouse_genomes_project X 16123027 16127141 - Gm26593 lincRNA lincRNA MGP_BALBcJ_T0016857.1 MGP_BALBcJ_G0014954.1 mouse_genomes_project X 163039312 163040608 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096398.1 MGP_BALBcJ_G0035782.1 mouse_genomes_project X 68688387 68718342 - MGP_BALBcJ_P0096398 Bcap31 protein_coding protein_coding MGP_BALBcJ_T0009381.1 MGP_BALBcJ_G0007528.1 mouse_genomes_project X 98871156 98884030 + Jpx lincRNA lincRNA MGP_BALBcJ_T0009382.1 MGP_BALBcJ_G0007528.1 mouse_genomes_project X 98871175 98872219 + Jpx lincRNA lincRNA MGP_BALBcJ_T0009383.1 MGP_BALBcJ_G0007528.1 mouse_genomes_project X 98871368 98880837 + Jpx lincRNA lincRNA MGP_BALBcJ_T0009384.1 MGP_BALBcJ_G0007528.1 mouse_genomes_project X 98871393 98880558 + Jpx lincRNA lincRNA MGP_BALBcJ_T0016704.1 MGP_BALBcJ_G0014801.1 mouse_genomes_project X 132856945 132860380 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097836.1 MGP_BALBcJ_G0036154.1 mouse_genomes_project X 147719500 147720136 + MGP_BALBcJ_P0097836 Cldn34a protein_coding protein_coding MGP_BALBcJ_T0016776.1 MGP_BALBcJ_G0014873.1 mouse_genomes_project X 146298790 146299150 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097979.1 MGP_BALBcJ_G0036197.1 mouse_genomes_project X 156032501 156191998 - MGP_BALBcJ_P0097979 Cdkl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097980.1 MGP_BALBcJ_G0036197.1 mouse_genomes_project X 156032501 156191965 - MGP_BALBcJ_P0097980 Cdkl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097981.1 MGP_BALBcJ_G0036197.1 mouse_genomes_project X 156045093 156256512 - MGP_BALBcJ_P0097981 Cdkl5 protein_coding protein_coding MGP_BALBcJ_T0097983.1 MGP_BALBcJ_G0036197.1 mouse_genomes_project X 156059944 156077975 - Cdkl5 protein_coding processed_transcript MGP_BALBcJ_T0097984.1 MGP_BALBcJ_G0036197.1 mouse_genomes_project X 156062185 156191965 - MGP_BALBcJ_P0097984 Cdkl5 protein_coding protein_coding MGP_BALBcJ_T0097985.1 MGP_BALBcJ_G0036197.1 mouse_genomes_project X 156108184 156111735 - Cdkl5 protein_coding retained_intron MGP_BALBcJ_T0096366.1 MGP_BALBcJ_G0035775.1 mouse_genomes_project X 68431598 68433238 - MGP_BALBcJ_P0096366 Trex2 protein_coding protein_coding MGP_BALBcJ_T0096705.1 MGP_BALBcJ_G0035824.1 mouse_genomes_project X 70208221 70225895 - MGP_BALBcJ_P0096705 Smim9 protein_coding protein_coding MGP_BALBcJ_T0096706.1 MGP_BALBcJ_G0035824.1 mouse_genomes_project X 70208399 70223762 - MGP_BALBcJ_P0096706 Smim9 protein_coding protein_coding MGP_BALBcJ_T0096707.1 MGP_BALBcJ_G0035824.1 mouse_genomes_project X 70211262 70225912 - Smim9 protein_coding processed_transcript MGP_BALBcJ_T0096077.1 MGP_BALBcJ_G0035668.1 mouse_genomes_project X 43500323 43530825 - MGP_BALBcJ_P0096077 Gm595 protein_coding protein_coding MGP_BALBcJ_T0096419.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790637 68794434 + MGP_BALBcJ_P0096419 Ssr4 protein_coding protein_coding MGP_BALBcJ_T0096420.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790671 68794436 + MGP_BALBcJ_P0096420 Ssr4 protein_coding protein_coding MGP_BALBcJ_T0096421.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790791 68792702 + Ssr4 protein_coding retained_intron MGP_BALBcJ_T0096422.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790793 68793942 + Ssr4 protein_coding retained_intron MGP_BALBcJ_T0096423.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790793 68794436 + Ssr4 protein_coding retained_intron MGP_BALBcJ_T0096424.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790833 68794421 + Ssr4 protein_coding retained_intron MGP_BALBcJ_T0096425.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68790874 68793773 + Ssr4 protein_coding retained_intron MGP_BALBcJ_T0096426.1 MGP_BALBcJ_G0035787.1 mouse_genomes_project X 68792453 68794440 + Ssr4 protein_coding retained_intron MGP_BALBcJ_T0100305.1 MGP_BALBcJ_G0038341.1 mouse_genomes_project X 158390556 158390663 - Gm22746 snRNA snRNA MGP_BALBcJ_T0016764.1 MGP_BALBcJ_G0014861.1 mouse_genomes_project X 141618853 141619327 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016616.1 MGP_BALBcJ_G0014713.1 mouse_genomes_project X 110504763 110505393 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097868.1 MGP_BALBcJ_G0036168.1 mouse_genomes_project X 149580384 149584288 + MGP_BALBcJ_P0097868 protein_coding protein_coding MGP_BALBcJ_T0016571.1 MGP_BALBcJ_G0014668.1 mouse_genomes_project X 102180715 102180933 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016688.1 MGP_BALBcJ_G0014785.1 mouse_genomes_project X 131493493 131493981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011740.1 MGP_BALBcJ_G0009865.1 mouse_genomes_project X 77777820 77777923 - Gm23671 misc_RNA misc_RNA MGP_BALBcJ_T0097220.1 MGP_BALBcJ_G0035979.1 mouse_genomes_project X 102260015 102263578 - MGP_BALBcJ_P0097220 Zcchc5 protein_coding protein_coding MGP_BALBcJ_T0095665.1 MGP_BALBcJ_G0035535.1 mouse_genomes_project X 5470885 5472321 + Mid1ip1 protein_coding processed_transcript MGP_BALBcJ_T0095666.1 MGP_BALBcJ_G0035535.1 mouse_genomes_project X 5470891 5474257 + MGP_BALBcJ_P0095666 Mid1ip1 protein_coding protein_coding MGP_BALBcJ_T0095667.1 MGP_BALBcJ_G0035535.1 mouse_genomes_project X 5473262 5475563 + MGP_BALBcJ_P0095667 Mid1ip1 protein_coding protein_coding MGP_BALBcJ_T0095668.1 MGP_BALBcJ_G0035535.1 mouse_genomes_project X 5473262 5475563 + MGP_BALBcJ_P0095668 Mid1ip1 protein_coding protein_coding MGP_BALBcJ_T0095669.1 MGP_BALBcJ_G0035535.1 mouse_genomes_project X 5473340 5474257 + MGP_BALBcJ_P0095669 Mid1ip1 protein_coding protein_coding MGP_BALBcJ_T0016780.1 MGP_BALBcJ_G0014877.1 mouse_genomes_project X 146888118 146888295 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016646.1 MGP_BALBcJ_G0014743.1 mouse_genomes_project X 116818557 116821464 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096793.1 MGP_BALBcJ_G0035853.1 mouse_genomes_project X 80168936 80189660 + MGP_BALBcJ_P0096793 Fthl17a protein_coding protein_coding MGP_BALBcJ_T0016454.1 MGP_BALBcJ_G0014551.1 mouse_genomes_project X 84441767 84442275 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101534.1 MGP_BALBcJ_G0039570.1 mouse_genomes_project X 77290990 77291127 - Gm24706 snoRNA snoRNA MGP_BALBcJ_T0095947.1 MGP_BALBcJ_G0035636.1 mouse_genomes_project X 33328426 33340274 + Mcts1 protein_coding processed_transcript MGP_BALBcJ_T0095948.1 MGP_BALBcJ_G0035636.1 mouse_genomes_project X 33328503 33341867 + MGP_BALBcJ_P0095948 Mcts1 protein_coding protein_coding MGP_BALBcJ_T0095949.1 MGP_BALBcJ_G0035636.1 mouse_genomes_project X 33329147 33334743 + Mcts1 protein_coding processed_transcript MGP_BALBcJ_T0095950.1 MGP_BALBcJ_G0035636.1 mouse_genomes_project X 33337163 33341867 + Mcts1 protein_coding processed_transcript MGP_BALBcJ_T0095951.1 MGP_BALBcJ_G0035636.1 mouse_genomes_project X 33338243 33341841 + Mcts1 protein_coding processed_transcript MGP_BALBcJ_T0096334.1 MGP_BALBcJ_G0035759.1 mouse_genomes_project X 66931593 66947705 + MGP_BALBcJ_P0096334 Fate1 protein_coding protein_coding MGP_BALBcJ_T0096335.1 MGP_BALBcJ_G0035759.1 mouse_genomes_project X 66940242 66947705 + MGP_BALBcJ_P0096335 Fate1 protein_coding protein_coding MGP_BALBcJ_T0096336.1 MGP_BALBcJ_G0035759.1 mouse_genomes_project X 66941867 66947427 + Fate1 protein_coding processed_transcript MGP_BALBcJ_T0102881.1 MGP_BALBcJ_G0040696.1 mouse_genomes_project X 101775308 101788681 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016727.1 MGP_BALBcJ_G0014824.1 mouse_genomes_project X 137003285 137003558 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009421.1 MGP_BALBcJ_G0007550.1 mouse_genomes_project X 162124101 162130882 - Gm15230 lincRNA lincRNA MGP_BALBcJ_T0097451.1 MGP_BALBcJ_G0036056.1 mouse_genomes_project X 130854111 130861979 - MGP_BALBcJ_P0097451 protein_coding protein_coding MGP_BALBcJ_T0097452.1 MGP_BALBcJ_G0036056.1 mouse_genomes_project X 130854111 130857526 - MGP_BALBcJ_P0097452 protein_coding protein_coding MGP_BALBcJ_T0097961.1 MGP_BALBcJ_G0036193.1 mouse_genomes_project X 155654625 155729025 + Adgrg2 protein_coding retained_intron MGP_BALBcJ_T0097962.1 MGP_BALBcJ_G0036193.1 mouse_genomes_project X 155654625 155738064 + MGP_BALBcJ_P0097962 Adgrg2 protein_coding protein_coding MGP_BALBcJ_T0097963.1 MGP_BALBcJ_G0036193.1 mouse_genomes_project X 155682729 155765246 + MGP_BALBcJ_P0097963 Adgrg2 protein_coding protein_coding MGP_BALBcJ_T0097964.1 MGP_BALBcJ_G0036193.1 mouse_genomes_project X 155691204 155765495 + MGP_BALBcJ_P0097964 Adgrg2 protein_coding protein_coding MGP_BALBcJ_T0016820.1 MGP_BALBcJ_G0014917.1 mouse_genomes_project X 154372075 154374656 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016625.1 MGP_BALBcJ_G0014722.1 mouse_genomes_project X 112425247 112426341 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100265.1 MGP_BALBcJ_G0038301.1 mouse_genomes_project X 70651797 70651961 - Gm25421 snRNA snRNA MGP_BALBcJ_T0016173.1 MGP_BALBcJ_G0014270.1 mouse_genomes_project X 7694689 7695372 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016160.1 MGP_BALBcJ_G0014257.1 mouse_genomes_project X 3747592 3748255 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097529.1 MGP_BALBcJ_G0036084.1 mouse_genomes_project X 133428013 133429429 - MGP_BALBcJ_P0097529 Tex13a protein_coding protein_coding MGP_BALBcJ_T0096382.1 MGP_BALBcJ_G0035780.1 mouse_genomes_project X 68657304 68661035 - MGP_BALBcJ_P0096382 Pnck protein_coding protein_coding MGP_BALBcJ_T0096383.1 MGP_BALBcJ_G0035780.1 mouse_genomes_project X 68657304 68661139 - MGP_BALBcJ_P0096383 Pnck protein_coding protein_coding MGP_BALBcJ_T0096384.1 MGP_BALBcJ_G0035780.1 mouse_genomes_project X 68657305 68661428 - MGP_BALBcJ_P0096384 Pnck protein_coding protein_coding MGP_BALBcJ_T0096385.1 MGP_BALBcJ_G0035780.1 mouse_genomes_project X 68657561 68659142 - Pnck protein_coding retained_intron MGP_BALBcJ_T0096386.1 MGP_BALBcJ_G0035780.1 mouse_genomes_project X 68658586 68660744 - MGP_BALBcJ_P0096386 Pnck protein_coding protein_coding MGP_BALBcJ_T0096825.1 MGP_BALBcJ_G0035871.1 mouse_genomes_project X 87660957 87661690 + MGP_BALBcJ_P0096825 Gm5941 protein_coding protein_coding MGP_BALBcJ_T0016241.1 MGP_BALBcJ_G0014338.1 mouse_genomes_project X 34872996 34873545 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098687.1 MGP_BALBcJ_G0036741.1 mouse_genomes_project X 13078365 13078484 - n-R5s5 rRNA rRNA MGP_BALBcJ_T0095920.1 MGP_BALBcJ_G0035626.1 mouse_genomes_project X 32708836 32718086 - MGP_BALBcJ_P0095920 protein_coding protein_coding MGP_BALBcJ_T0016656.1 MGP_BALBcJ_G0014753.1 mouse_genomes_project X 121943197 121943561 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005563.1 MGP_BALBcJ_G0004690.1 mouse_genomes_project X 55839260 55843647 + Gm14662 antisense antisense MGP_BALBcJ_T0016244.1 MGP_BALBcJ_G0014341.1 mouse_genomes_project X 35662500 35663611 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016725.1 MGP_BALBcJ_G0014822.1 mouse_genomes_project X 136913590 136914073 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097413.1 MGP_BALBcJ_G0036047.1 mouse_genomes_project X 129739648 129749896 + MGP_BALBcJ_P0097413 Armcx4 protein_coding protein_coding MGP_BALBcJ_T0101805.1 MGP_BALBcJ_G0039742.1 mouse_genomes_project X 123335321 123335963 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0102865.1 MGP_BALBcJ_G0040680.1 mouse_genomes_project X 72785996 72790074 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016702.1 MGP_BALBcJ_G0014799.1 mouse_genomes_project X 132375661 132376417 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097986.1 MGP_BALBcJ_G0036198.1 mouse_genomes_project X 156164529 156169466 - MGP_BALBcJ_P0097986 Gja6 protein_coding protein_coding MGP_BALBcJ_T0016393.1 MGP_BALBcJ_G0014490.1 mouse_genomes_project X 71100449 71100837 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096613.1 MGP_BALBcJ_G0035807.1 mouse_genomes_project X 69324084 69331390 + MGP_BALBcJ_P0096613 Fam50a protein_coding protein_coding MGP_BALBcJ_T0096614.1 MGP_BALBcJ_G0035807.1 mouse_genomes_project X 69324177 69331375 + Fam50a protein_coding retained_intron MGP_BALBcJ_T0096615.1 MGP_BALBcJ_G0035807.1 mouse_genomes_project X 69328291 69328789 + Fam50a protein_coding retained_intron MGP_BALBcJ_T0016795.1 MGP_BALBcJ_G0014892.1 mouse_genomes_project X 150446943 150447573 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097102.1 MGP_BALBcJ_G0035940.1 mouse_genomes_project X 97417622 97433506 - MGP_BALBcJ_P0097102 Ercc6l protein_coding protein_coding MGP_BALBcJ_T0016620.1 MGP_BALBcJ_G0014717.1 mouse_genomes_project X 110855917 110856771 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011188.1 MGP_BALBcJ_G0009313.1 mouse_genomes_project X 137874129 137874227 + Mir652 miRNA miRNA MGP_BALBcJ_T0011117.1 MGP_BALBcJ_G0009242.1 mouse_genomes_project X 47348486 47348577 - Mir92-2 miRNA miRNA MGP_BALBcJ_T0096152.1 MGP_BALBcJ_G0035702.1 mouse_genomes_project X 51298144 51317283 + MGP_BALBcJ_P0096152 Zfp449 protein_coding protein_coding MGP_BALBcJ_T0016837.1 MGP_BALBcJ_G0014934.1 mouse_genomes_project X 158076805 158077491 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016384.1 MGP_BALBcJ_G0014481.1 mouse_genomes_project X 69533126 69533711 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009405.1 MGP_BALBcJ_G0007541.1 mouse_genomes_project X 145444363 145445132 - lincRNA lincRNA MGP_BALBcJ_T0009406.1 MGP_BALBcJ_G0007541.1 mouse_genomes_project X 145444713 145445127 - lincRNA lincRNA MGP_BALBcJ_T0011146.1 MGP_BALBcJ_G0009271.1 mouse_genomes_project X 61853797 61853872 - Mir470 miRNA miRNA MGP_BALBcJ_T0096277.1 MGP_BALBcJ_G0035745.1 mouse_genomes_project X 64885487 64886166 + MGP_BALBcJ_P0096277 Gm6812 protein_coding protein_coding MGP_BALBcJ_T0016260.1 MGP_BALBcJ_G0014357.1 mouse_genomes_project X 39218456 39218796 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097861.1 MGP_BALBcJ_G0036166.1 mouse_genomes_project X 148907685 148925606 + MGP_BALBcJ_P0097861 2210013O21Rik protein_coding protein_coding MGP_BALBcJ_T0097862.1 MGP_BALBcJ_G0036166.1 mouse_genomes_project X 148907705 148926262 + MGP_BALBcJ_P0097862 2210013O21Rik protein_coding protein_coding MGP_BALBcJ_T0097863.1 MGP_BALBcJ_G0036166.1 mouse_genomes_project X 148907722 148913284 + MGP_BALBcJ_P0097863 2210013O21Rik protein_coding protein_coding MGP_BALBcJ_T0097864.1 MGP_BALBcJ_G0036166.1 mouse_genomes_project X 148908034 148925464 + 2210013O21Rik protein_coding processed_transcript MGP_BALBcJ_T0096239.1 MGP_BALBcJ_G0035729.1 mouse_genomes_project X 56128678 56129983 - MGP_BALBcJ_P0096239 protein_coding protein_coding MGP_BALBcJ_T0102873.1 MGP_BALBcJ_G0040688.1 mouse_genomes_project X 86775344 86776263 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0095719.1 MGP_BALBcJ_G0035550.1 mouse_genomes_project X 11469673 11583236 - MGP_BALBcJ_P0095719 Maob protein_coding protein_coding MGP_BALBcJ_T0095720.1 MGP_BALBcJ_G0035550.1 mouse_genomes_project X 11470430 11583145 - MGP_BALBcJ_P0095720 Maob protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095721.1 MGP_BALBcJ_G0035550.1 mouse_genomes_project X 11478464 11583145 - MGP_BALBcJ_P0095721 Maob protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095722.1 MGP_BALBcJ_G0035550.1 mouse_genomes_project X 11500465 11583190 - MGP_BALBcJ_P0095722 Maob protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101562.1 MGP_BALBcJ_G0039598.1 mouse_genomes_project X 152554764 152554896 - Gm25795 snoRNA snoRNA MGP_BALBcJ_T0016799.1 MGP_BALBcJ_G0014896.1 mouse_genomes_project X 151188170 151189077 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016808.1 MGP_BALBcJ_G0014905.1 mouse_genomes_project X 152874807 152874939 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096343.1 MGP_BALBcJ_G0035763.1 mouse_genomes_project X 67316804 67321793 - MGP_BALBcJ_P0096343 Magea10 protein_coding protein_coding MGP_BALBcJ_T0096839.1 MGP_BALBcJ_G0035876.1 mouse_genomes_project X 89134653 89141462 + MGP_BALBcJ_P0096839 AU015836 protein_coding protein_coding MGP_BALBcJ_T0096840.1 MGP_BALBcJ_G0035876.1 mouse_genomes_project X 89134668 89141462 + MGP_BALBcJ_P0096840 AU015836 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096841.1 MGP_BALBcJ_G0035876.1 mouse_genomes_project X 89134676 89135653 + MGP_BALBcJ_P0096841 AU015836 protein_coding protein_coding MGP_BALBcJ_T0096842.1 MGP_BALBcJ_G0035876.1 mouse_genomes_project X 89135636 89137657 + AU015836 protein_coding processed_transcript MGP_BALBcJ_T0096843.1 MGP_BALBcJ_G0035876.1 mouse_genomes_project X 89135790 89141063 + MGP_BALBcJ_P0096843 AU015836 protein_coding protein_coding MGP_BALBcJ_T0096053.1 MGP_BALBcJ_G0035662.1 mouse_genomes_project X 43145966 43184447 - Aifm1 protein_coding retained_intron MGP_BALBcJ_T0096054.1 MGP_BALBcJ_G0035662.1 mouse_genomes_project X 43145966 43184580 - MGP_BALBcJ_P0096054 Aifm1 protein_coding protein_coding MGP_BALBcJ_T0096055.1 MGP_BALBcJ_G0035662.1 mouse_genomes_project X 43145966 43184584 - MGP_BALBcJ_P0096055 Aifm1 protein_coding protein_coding MGP_BALBcJ_T0096056.1 MGP_BALBcJ_G0035662.1 mouse_genomes_project X 43145967 43153923 - Aifm1 protein_coding processed_transcript MGP_BALBcJ_T0096057.1 MGP_BALBcJ_G0035662.1 mouse_genomes_project X 43156484 43157545 - Aifm1 protein_coding processed_transcript MGP_BALBcJ_T0016436.1 MGP_BALBcJ_G0014533.1 mouse_genomes_project X 80739922 80740181 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011172.1 MGP_BALBcJ_G0009297.1 mouse_genomes_project X 98956857 98956933 - Mir421 miRNA miRNA MGP_BALBcJ_T0097846.1 MGP_BALBcJ_G0036157.1 mouse_genomes_project X 148173752 148176700 + MGP_BALBcJ_P0097846 Usp51 protein_coding protein_coding MGP_BALBcJ_T0099062.1 MGP_BALBcJ_G0037098.1 mouse_genomes_project X 642726 708748 - Gm26618 sense_overlapping sense_overlapping MGP_BALBcJ_T0016551.1 MGP_BALBcJ_G0014648.1 mouse_genomes_project X 99272387 99273401 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016647.1 MGP_BALBcJ_G0014744.1 mouse_genomes_project X 116896924 116898043 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097855.1 MGP_BALBcJ_G0036162.1 mouse_genomes_project X 148675156 148678501 + MGP_BALBcJ_P0097855 Ubqln2 protein_coding protein_coding MGP_BALBcJ_T0102892.1 MGP_BALBcJ_G0040707.1 mouse_genomes_project X 149416246 149418515 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016385.1 MGP_BALBcJ_G0014482.1 mouse_genomes_project X 69573045 69573794 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095868.1 MGP_BALBcJ_G0035598.1 mouse_genomes_project X 31644196 31724244 - MGP_BALBcJ_P0095868 Sept6 protein_coding protein_coding MGP_BALBcJ_T0095869.1 MGP_BALBcJ_G0035598.1 mouse_genomes_project X 31646316 31724244 - MGP_BALBcJ_P0095869 Sept6 protein_coding protein_coding MGP_BALBcJ_T0095870.1 MGP_BALBcJ_G0035598.1 mouse_genomes_project X 31647901 31724244 - MGP_BALBcJ_P0095870 Sept6 protein_coding protein_coding MGP_BALBcJ_T0095871.1 MGP_BALBcJ_G0035598.1 mouse_genomes_project X 31701184 31726380 - MGP_BALBcJ_P0095871 Sept6 protein_coding protein_coding MGP_BALBcJ_T0095872.1 MGP_BALBcJ_G0035598.1 mouse_genomes_project X 31706490 31724079 - Sept6 protein_coding retained_intron MGP_BALBcJ_T0011114.1 MGP_BALBcJ_G0009239.1 mouse_genomes_project X 46981126 46981187 - Mir6384 miRNA miRNA MGP_BALBcJ_T0016212.1 MGP_BALBcJ_G0014309.1 mouse_genomes_project X 16379918 16380299 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016588.1 MGP_BALBcJ_G0014685.1 mouse_genomes_project X 105770917 105773323 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097505.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132219155 132278001 - MGP_BALBcJ_P0097505 Slc25a53 protein_coding protein_coding MGP_BALBcJ_T0097506.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132219161 132277979 - MGP_BALBcJ_P0097506 Slc25a53 protein_coding protein_coding MGP_BALBcJ_T0097507.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132219161 132231218 - MGP_BALBcJ_P0097507 Slc25a53 protein_coding protein_coding MGP_BALBcJ_T0097508.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132220921 132231243 - MGP_BALBcJ_P0097508 Slc25a53 protein_coding protein_coding MGP_BALBcJ_T0097509.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132221063 132231275 - MGP_BALBcJ_P0097509 Slc25a53 protein_coding protein_coding MGP_BALBcJ_T0097513.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132239186 132269084 - Slc25a53 protein_coding retained_intron MGP_BALBcJ_T0097514.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132239223 132278003 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097515.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132240950 132277733 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097516.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132240951 132277973 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097517.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132241719 132256323 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097518.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132253836 132278000 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097519.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132269006 132277725 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097520.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132270799 132278003 - Slc25a53 protein_coding retained_intron MGP_BALBcJ_T0097521.1 MGP_BALBcJ_G0036079.1 mouse_genomes_project X 132271408 132277709 - Slc25a53 protein_coding processed_transcript MGP_BALBcJ_T0097353.1 MGP_BALBcJ_G0036030.1 mouse_genomes_project X 128912857 128920214 - MGP_BALBcJ_P0097353 Tspan6 protein_coding protein_coding MGP_BALBcJ_T0097354.1 MGP_BALBcJ_G0036030.1 mouse_genomes_project X 128914490 128920079 - MGP_BALBcJ_P0097354 Tspan6 protein_coding protein_coding MGP_BALBcJ_T0097355.1 MGP_BALBcJ_G0036030.1 mouse_genomes_project X 128916309 128920079 - MGP_BALBcJ_P0097355 Tspan6 protein_coding protein_coding MGP_BALBcJ_T0097356.1 MGP_BALBcJ_G0036030.1 mouse_genomes_project X 128918506 128919898 - Tspan6 protein_coding processed_transcript MGP_BALBcJ_T0098075.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160198048 160241535 - MGP_BALBcJ_P0098075 Mospd2 protein_coding protein_coding MGP_BALBcJ_T0098076.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160198197 160241457 - MGP_BALBcJ_P0098076 Mospd2 protein_coding protein_coding MGP_BALBcJ_T0098077.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160200088 160241495 - MGP_BALBcJ_P0098077 Mospd2 protein_coding protein_coding MGP_BALBcJ_T0098078.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160216995 160241488 - Mospd2 protein_coding retained_intron MGP_BALBcJ_T0098079.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160217000 160241488 - Mospd2 protein_coding retained_intron MGP_BALBcJ_T0098080.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160222079 160241485 - Mospd2 protein_coding retained_intron MGP_BALBcJ_T0098081.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160225848 160241487 - Mospd2 protein_coding retained_intron MGP_BALBcJ_T0098082.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160226174 160241503 - Mospd2 protein_coding processed_transcript MGP_BALBcJ_T0098083.1 MGP_BALBcJ_G0036222.1 mouse_genomes_project X 160240820 160241482 - Mospd2 protein_coding retained_intron MGP_BALBcJ_T0101785.1 MGP_BALBcJ_G0039729.1 mouse_genomes_project X 5177291 5179229 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101786.1 MGP_BALBcJ_G0039729.1 mouse_genomes_project X 5178633 5179124 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0011101.1 MGP_BALBcJ_G0009226.1 mouse_genomes_project X 13844059 13844154 - Mir221 miRNA miRNA MGP_BALBcJ_T0016759.1 MGP_BALBcJ_G0014856.1 mouse_genomes_project X 141064030 141064582 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011196.1 MGP_BALBcJ_G0009321.1 mouse_genomes_project X 142174522 142174620 + Mir1298 miRNA miRNA MGP_BALBcJ_T0096733.1 MGP_BALBcJ_G0035832.1 mouse_genomes_project X 70864671 70961180 - MGP_BALBcJ_P0096733 Pls3 protein_coding protein_coding MGP_BALBcJ_T0096734.1 MGP_BALBcJ_G0035832.1 mouse_genomes_project X 70864680 70960539 - MGP_BALBcJ_P0096734 Pls3 protein_coding protein_coding MGP_BALBcJ_T0096735.1 MGP_BALBcJ_G0035832.1 mouse_genomes_project X 70864680 70908457 - MGP_BALBcJ_P0096735 Pls3 protein_coding protein_coding MGP_BALBcJ_T0096736.1 MGP_BALBcJ_G0035832.1 mouse_genomes_project X 70864685 70924368 - MGP_BALBcJ_P0096736 Pls3 protein_coding protein_coding MGP_BALBcJ_T0096737.1 MGP_BALBcJ_G0035832.1 mouse_genomes_project X 70865788 70924490 - MGP_BALBcJ_P0096737 Pls3 protein_coding protein_coding MGP_BALBcJ_T0096738.1 MGP_BALBcJ_G0035832.1 mouse_genomes_project X 70959510 70961097 - Pls3 protein_coding processed_transcript MGP_BALBcJ_T0095460.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2199634 2227705 + MGP_BALBcJ_P0095460 Cacna1f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095461.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2199649 2210637 + Cacna1f protein_coding retained_intron MGP_BALBcJ_T0095462.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2199650 2227708 + MGP_BALBcJ_P0095462 Cacna1f protein_coding protein_coding MGP_BALBcJ_T0095463.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2199671 2211661 + MGP_BALBcJ_P0095463 Cacna1f protein_coding protein_coding MGP_BALBcJ_T0095464.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2199680 2227708 + MGP_BALBcJ_P0095464 Cacna1f protein_coding protein_coding MGP_BALBcJ_T0095465.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2199695 2227706 + Cacna1f protein_coding retained_intron MGP_BALBcJ_T0095466.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2218741 2220453 + Cacna1f protein_coding retained_intron MGP_BALBcJ_T0095467.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2219705 2222758 + MGP_BALBcJ_P0095467 Cacna1f protein_coding protein_coding MGP_BALBcJ_T0095468.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2219705 2223011 + MGP_BALBcJ_P0095468 Cacna1f protein_coding protein_coding MGP_BALBcJ_T0095469.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2220700 2222274 + Cacna1f protein_coding retained_intron MGP_BALBcJ_T0095470.1 MGP_BALBcJ_G0035488.1 mouse_genomes_project X 2223787 2225501 + Cacna1f protein_coding retained_intron MGP_BALBcJ_T0016723.1 MGP_BALBcJ_G0014820.1 mouse_genomes_project X 136768052 136768562 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016682.1 MGP_BALBcJ_G0014779.1 mouse_genomes_project X 129894669 129895532 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096401.1 MGP_BALBcJ_G0035784.1 mouse_genomes_project X 68760305 68776116 + MGP_BALBcJ_P0096401 Plxnb3 protein_coding unknown_likely_coding MGP_BALBcJ_T0096402.1 MGP_BALBcJ_G0035784.1 mouse_genomes_project X 68760719 68776124 + Plxnb3 protein_coding retained_intron MGP_BALBcJ_T0096403.1 MGP_BALBcJ_G0035784.1 mouse_genomes_project X 68760719 68776124 + Plxnb3 protein_coding retained_intron MGP_BALBcJ_T0096404.1 MGP_BALBcJ_G0035784.1 mouse_genomes_project X 68760719 68776124 + Plxnb3 protein_coding retained_intron MGP_BALBcJ_T0096405.1 MGP_BALBcJ_G0035784.1 mouse_genomes_project X 68769140 68773274 + Plxnb3 protein_coding retained_intron MGP_BALBcJ_T0016574.1 MGP_BALBcJ_G0014671.1 mouse_genomes_project X 102593618 102594503 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095566.1 MGP_BALBcJ_G0035506.1 mouse_genomes_project X 2521784 2522170 + MGP_BALBcJ_P0095566 protein_coding protein_coding MGP_BALBcJ_T0097891.1 MGP_BALBcJ_G0036178.1 mouse_genomes_project X 150907523 151118250 + Gm15155 protein_coding processed_transcript MGP_BALBcJ_T0097892.1 MGP_BALBcJ_G0036178.1 mouse_genomes_project X 150907557 151610670 + MGP_BALBcJ_P0097892 Gm15155 protein_coding protein_coding MGP_BALBcJ_T0096815.1 MGP_BALBcJ_G0035862.1 mouse_genomes_project X 84976409 84979164 - MGP_BALBcJ_P0096815 4930415L06Rik protein_coding protein_coding MGP_BALBcJ_T0005588.1 MGP_BALBcJ_G0004709.1 mouse_genomes_project X 150905570 150906143 + Gm15156 antisense antisense MGP_BALBcJ_T0102896.1 MGP_BALBcJ_G0040711.1 mouse_genomes_project X 165262862 165269490 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016138.1 MGP_BALBcJ_G0014235.1 mouse_genomes_project X 477162 478986 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100244.1 MGP_BALBcJ_G0038280.1 mouse_genomes_project X 31099199 31099303 + Gm25047 snRNA snRNA MGP_BALBcJ_T0096911.1 MGP_BALBcJ_G0035894.1 mouse_genomes_project X 91590783 91739104 - MGP_BALBcJ_P0096911 Hsf3 protein_coding protein_coding MGP_BALBcJ_T0096912.1 MGP_BALBcJ_G0035894.1 mouse_genomes_project X 91591472 91642623 - MGP_BALBcJ_P0096912 Hsf3 protein_coding protein_coding MGP_BALBcJ_T0096913.1 MGP_BALBcJ_G0035894.1 mouse_genomes_project X 91591940 91739093 - MGP_BALBcJ_P0096913 Hsf3 protein_coding protein_coding MGP_BALBcJ_T0096914.1 MGP_BALBcJ_G0035894.1 mouse_genomes_project X 91592098 91660816 - MGP_BALBcJ_P0096914 Hsf3 protein_coding protein_coding MGP_BALBcJ_T0096915.1 MGP_BALBcJ_G0035894.1 mouse_genomes_project X 91606570 91626674 - Hsf3 protein_coding retained_intron MGP_BALBcJ_T0016617.1 MGP_BALBcJ_G0014714.1 mouse_genomes_project X 110520171 110521954 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097144.1 MGP_BALBcJ_G0035958.1 mouse_genomes_project X 99087765 99208756 - MGP_BALBcJ_P0097144 Slc16a2 protein_coding protein_coding MGP_BALBcJ_T0097145.1 MGP_BALBcJ_G0035958.1 mouse_genomes_project X 99090219 99096823 - Slc16a2 protein_coding retained_intron MGP_BALBcJ_T0097146.1 MGP_BALBcJ_G0035958.1 mouse_genomes_project X 99096752 99124535 - Slc16a2 protein_coding processed_transcript MGP_BALBcJ_T0101551.1 MGP_BALBcJ_G0039587.1 mouse_genomes_project X 127575709 127575840 - Gm23768 snoRNA snoRNA MGP_BALBcJ_T0016403.1 MGP_BALBcJ_G0014500.1 mouse_genomes_project X 72769806 72772130 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098087.1 MGP_BALBcJ_G0036224.1 mouse_genomes_project X 160267882 160268941 - MGP_BALBcJ_P0098087 Gm17604 protein_coding protein_coding MGP_BALBcJ_T0097720.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145723723 145754060 + MGP_BALBcJ_P0097720 Pfkfb1 protein_coding protein_coding MGP_BALBcJ_T0097721.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145723750 145748212 + Pfkfb1 protein_coding processed_transcript MGP_BALBcJ_T0097722.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145725415 145771485 + MGP_BALBcJ_P0097722 Pfkfb1 protein_coding protein_coding MGP_BALBcJ_T0097723.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145729973 145771485 + MGP_BALBcJ_P0097723 Pfkfb1 protein_coding protein_coding MGP_BALBcJ_T0097724.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145730103 145771464 + Pfkfb1 protein_coding retained_intron MGP_BALBcJ_T0097725.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145749213 145753583 + Pfkfb1 protein_coding processed_transcript MGP_BALBcJ_T0097726.1 MGP_BALBcJ_G0036137.1 mouse_genomes_project X 145754217 145769584 + Pfkfb1 protein_coding processed_transcript MGP_BALBcJ_T0016753.1 MGP_BALBcJ_G0014850.1 mouse_genomes_project X 140326752 140327386 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016557.1 MGP_BALBcJ_G0014654.1 mouse_genomes_project X 100542718 100543813 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101795.1 MGP_BALBcJ_G0039735.1 mouse_genomes_project X 48670343 48670579 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101564.1 MGP_BALBcJ_G0039600.1 mouse_genomes_project X 153649057 153649208 + Gm22522 snoRNA snoRNA MGP_BALBcJ_T0011167.1 MGP_BALBcJ_G0009292.1 mouse_genomes_project X 91534049 91534159 + Mir223 miRNA miRNA MGP_BALBcJ_T0011747.1 MGP_BALBcJ_G0009872.1 mouse_genomes_project X 98980303 98980374 + Gm27798 misc_RNA misc_RNA MGP_BALBcJ_T0096105.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45743733 45841240 - MGP_BALBcJ_P0096105 Mbnl3 protein_coding protein_coding MGP_BALBcJ_T0096106.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45746546 45841398 - MGP_BALBcJ_P0096106 Mbnl3 protein_coding protein_coding MGP_BALBcJ_T0096107.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45746546 45777034 - MGP_BALBcJ_P0096107 Mbnl3 protein_coding protein_coding MGP_BALBcJ_T0096108.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45746918 45754016 - Mbnl3 protein_coding retained_intron MGP_BALBcJ_T0096109.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45746955 45795475 - MGP_BALBcJ_P0096109 Mbnl3 protein_coding protein_coding MGP_BALBcJ_T0096110.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45747351 45769984 - Mbnl3 protein_coding processed_transcript MGP_BALBcJ_T0096111.1 MGP_BALBcJ_G0035680.1 mouse_genomes_project X 45795217 45841940 - Mbnl3 protein_coding processed_transcript MGP_BALBcJ_T0016445.1 MGP_BALBcJ_G0014542.1 mouse_genomes_project X 83386860 83387171 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096926.1 MGP_BALBcJ_G0035898.1 mouse_genomes_project X 92613718 92656904 - MGP_BALBcJ_P0096926 Eda2r protein_coding protein_coding MGP_BALBcJ_T0096927.1 MGP_BALBcJ_G0035898.1 mouse_genomes_project X 92617015 92656838 - MGP_BALBcJ_P0096927 Eda2r protein_coding protein_coding MGP_BALBcJ_T0096928.1 MGP_BALBcJ_G0035898.1 mouse_genomes_project X 92617668 92656904 - Eda2r protein_coding retained_intron MGP_BALBcJ_T0096929.1 MGP_BALBcJ_G0035898.1 mouse_genomes_project X 92620196 92656860 - Eda2r protein_coding retained_intron MGP_BALBcJ_T0016351.1 MGP_BALBcJ_G0014448.1 mouse_genomes_project X 62015356 62016793 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016615.1 MGP_BALBcJ_G0014712.1 mouse_genomes_project X 110352990 110355919 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009354.1 MGP_BALBcJ_G0007508.1 mouse_genomes_project X 33432782 33463141 - Gm14565 lincRNA lincRNA MGP_BALBcJ_T0097218.1 MGP_BALBcJ_G0035978.1 mouse_genomes_project X 102024190 102148125 + MGP_BALBcJ_P0097218 Gm5127 protein_coding protein_coding MGP_BALBcJ_T0097219.1 MGP_BALBcJ_G0035978.1 mouse_genomes_project X 102024190 102147430 + MGP_BALBcJ_P0097219 Gm5127 protein_coding protein_coding MGP_BALBcJ_T0097687.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142558830 142652600 - MGP_BALBcJ_P0097687 protein_coding unknown_likely_coding MGP_BALBcJ_T0097688.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142558832 142602783 - MGP_BALBcJ_P0097688 protein_coding protein_coding MGP_BALBcJ_T0097689.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142558837 142644520 - MGP_BALBcJ_P0097689 protein_coding protein_coding MGP_BALBcJ_T0097690.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142558844 142588047 - protein_coding retained_intron MGP_BALBcJ_T0097691.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142558844 142644489 - MGP_BALBcJ_P0097691 protein_coding protein_coding MGP_BALBcJ_T0097692.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142561270 142609781 - MGP_BALBcJ_P0097692 protein_coding protein_coding MGP_BALBcJ_T0097693.1 MGP_BALBcJ_G0036133.1 mouse_genomes_project X 142574561 142593352 - protein_coding processed_transcript MGP_BALBcJ_T0016809.1 MGP_BALBcJ_G0014906.1 mouse_genomes_project X 152882908 152883341 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011178.1 MGP_BALBcJ_G0009303.1 mouse_genomes_project X 100787038 100787136 - Mir325 miRNA miRNA MGP_BALBcJ_T0011132.1 MGP_BALBcJ_G0009257.1 mouse_genomes_project X 55315166 55315256 - Mir505 miRNA miRNA MGP_BALBcJ_T0016374.1 MGP_BALBcJ_G0014471.1 mouse_genomes_project X 66153759 66154823 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011757.1 MGP_BALBcJ_G0009882.1 mouse_genomes_project X 133033849 133034134 - Gm25393 misc_RNA misc_RNA MGP_BALBcJ_T0096144.1 MGP_BALBcJ_G0035695.1 mouse_genomes_project X 48230730 48231991 + MGP_BALBcJ_P0096144 protein_coding protein_coding MGP_BALBcJ_T0018576.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45158706 45253136 - processed_transcript processed_transcript MGP_BALBcJ_T0018577.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45158706 45170335 - processed_transcript processed_transcript MGP_BALBcJ_T0018578.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45158713 45168323 - processed_transcript processed_transcript MGP_BALBcJ_T0018579.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45163594 45175651 - processed_transcript processed_transcript MGP_BALBcJ_T0018580.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45163803 45166480 - processed_transcript processed_transcript MGP_BALBcJ_T0018581.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45165112 45199556 - processed_transcript processed_transcript MGP_BALBcJ_T0018582.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45233089 45253178 - processed_transcript processed_transcript MGP_BALBcJ_T0018583.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45244325 45253186 - processed_transcript processed_transcript MGP_BALBcJ_T0018584.1 MGP_BALBcJ_G0015715.1 mouse_genomes_project X 45244325 45253196 - processed_transcript processed_transcript MGP_BALBcJ_T0016794.1 MGP_BALBcJ_G0014891.1 mouse_genomes_project X 150415065 150415425 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016630.1 MGP_BALBcJ_G0014727.1 mouse_genomes_project X 112910270 112910715 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016810.1 MGP_BALBcJ_G0014907.1 mouse_genomes_project X 152917538 152918134 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002472.1 MGP_BALBcJ_G0002381.1 mouse_genomes_project X 68405509 68406765 + TEC TEC MGP_BALBcJ_T0016716.1 MGP_BALBcJ_G0014813.1 mouse_genomes_project X 135686598 135687427 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016391.1 MGP_BALBcJ_G0014488.1 mouse_genomes_project X 70547298 70547587 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096082.1 MGP_BALBcJ_G0035670.1 mouse_genomes_project X 44093630 44126018 + MGP_BALBcJ_P0096082 Arhgap36 protein_coding protein_coding MGP_BALBcJ_T0096083.1 MGP_BALBcJ_G0035670.1 mouse_genomes_project X 44100143 44129753 + MGP_BALBcJ_P0096083 Arhgap36 protein_coding protein_coding MGP_BALBcJ_T0096084.1 MGP_BALBcJ_G0035670.1 mouse_genomes_project X 44100270 44129751 + MGP_BALBcJ_P0096084 Arhgap36 protein_coding protein_coding MGP_BALBcJ_T0096085.1 MGP_BALBcJ_G0035670.1 mouse_genomes_project X 44115232 44124759 + Arhgap36 protein_coding processed_transcript MGP_BALBcJ_T0096086.1 MGP_BALBcJ_G0035670.1 mouse_genomes_project X 44123385 44124964 + Arhgap36 protein_coding processed_transcript MGP_BALBcJ_T0096129.1 MGP_BALBcJ_G0035688.1 mouse_genomes_project X 47615556 47649125 + MGP_BALBcJ_P0096129 Hprt protein_coding protein_coding MGP_BALBcJ_T0097010.1 MGP_BALBcJ_G0035919.1 mouse_genomes_project X 96324430 96330881 - Slc7a3 protein_coding retained_intron MGP_BALBcJ_T0097011.1 MGP_BALBcJ_G0035919.1 mouse_genomes_project X 96324683 96330896 - MGP_BALBcJ_P0097011 Slc7a3 protein_coding unknown_likely_coding MGP_BALBcJ_T0097012.1 MGP_BALBcJ_G0035919.1 mouse_genomes_project X 96325027 96329553 - Slc7a3 protein_coding processed_transcript MGP_BALBcJ_T0097013.1 MGP_BALBcJ_G0035919.1 mouse_genomes_project X 96326871 96327535 - Slc7a3 protein_coding retained_intron MGP_BALBcJ_T0097014.1 MGP_BALBcJ_G0035919.1 mouse_genomes_project X 96327059 96327761 - Slc7a3 protein_coding retained_intron MGP_BALBcJ_T0016640.1 MGP_BALBcJ_G0014737.1 mouse_genomes_project X 115315072 115315325 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095813.1 MGP_BALBcJ_G0035576.1 mouse_genomes_project X 15870297 15875670 + MGP_BALBcJ_P0095813 Ssxa1 protein_coding protein_coding MGP_BALBcJ_T0095814.1 MGP_BALBcJ_G0035576.1 mouse_genomes_project X 15872849 15875670 + MGP_BALBcJ_P0095814 Ssxa1 protein_coding protein_coding MGP_BALBcJ_T0097315.1 MGP_BALBcJ_G0036011.1 mouse_genomes_project X 110010305 110011108 + MGP_BALBcJ_P0097315 Ube2dnl1 protein_coding protein_coding MGP_BALBcJ_T0016215.1 MGP_BALBcJ_G0014312.1 mouse_genomes_project X 17067624 17068048 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096162.1 MGP_BALBcJ_G0035706.1 mouse_genomes_project X 51474215 51474906 + MGP_BALBcJ_P0096162 Gm10477 protein_coding protein_coding MGP_BALBcJ_T0016552.1 MGP_BALBcJ_G0014649.1 mouse_genomes_project X 99311216 99312665 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011094.1 MGP_BALBcJ_G0009219.1 mouse_genomes_project X 1831638 1831703 - Mir362 miRNA miRNA MGP_BALBcJ_T0102034.1 MGP_BALBcJ_G0039856.1 mouse_genomes_project X 98537443 98621678 - unitary_pseudogene processed_transcript MGP_BALBcJ_T0102035.1 MGP_BALBcJ_G0039856.1 mouse_genomes_project X 98590312 98621678 - unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0102036.1 MGP_BALBcJ_G0039856.1 mouse_genomes_project X 98590312 98690665 - unitary_pseudogene processed_transcript MGP_BALBcJ_T0102037.1 MGP_BALBcJ_G0039856.1 mouse_genomes_project X 98590378 98618111 - unitary_pseudogene processed_transcript MGP_BALBcJ_T0102038.1 MGP_BALBcJ_G0039856.1 mouse_genomes_project X 98591666 98621670 - unitary_pseudogene retained_intron MGP_BALBcJ_T0102039.1 MGP_BALBcJ_G0039856.1 mouse_genomes_project X 98593217 98654432 - unitary_pseudogene processed_transcript MGP_BALBcJ_T0011104.1 MGP_BALBcJ_G0009229.1 mouse_genomes_project X 15612617 15612674 - Mir5617 miRNA miRNA MGP_BALBcJ_T0016290.1 MGP_BALBcJ_G0014387.1 mouse_genomes_project X 47492680 47494078 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097481.1 MGP_BALBcJ_G0036066.1 mouse_genomes_project X 131398948 131400978 + MGP_BALBcJ_P0097481 Wbp5 protein_coding protein_coding MGP_BALBcJ_T0097482.1 MGP_BALBcJ_G0036066.1 mouse_genomes_project X 131399552 131400978 + MGP_BALBcJ_P0097482 Wbp5 protein_coding protein_coding MGP_BALBcJ_T0016829.1 MGP_BALBcJ_G0014926.1 mouse_genomes_project X 155974547 155974830 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016770.1 MGP_BALBcJ_G0014867.1 mouse_genomes_project X 145557752 145558031 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096894.1 MGP_BALBcJ_G0035889.1 mouse_genomes_project X 90932350 90956434 - MGP_BALBcJ_P0096894 Zc4h2 protein_coding protein_coding MGP_BALBcJ_T0096895.1 MGP_BALBcJ_G0035889.1 mouse_genomes_project X 90932353 90956409 - MGP_BALBcJ_P0096895 Zc4h2 protein_coding protein_coding MGP_BALBcJ_T0096896.1 MGP_BALBcJ_G0035889.1 mouse_genomes_project X 90932356 90956535 - MGP_BALBcJ_P0096896 Zc4h2 protein_coding protein_coding MGP_BALBcJ_T0098145.1 MGP_BALBcJ_G0036240.1 mouse_genomes_project X 164471718 164482795 - MGP_BALBcJ_P0098145 Amelx protein_coding protein_coding MGP_BALBcJ_T0098146.1 MGP_BALBcJ_G0036240.1 mouse_genomes_project X 164475626 164482795 - Amelx protein_coding processed_transcript MGP_BALBcJ_T0098147.1 MGP_BALBcJ_G0036240.1 mouse_genomes_project X 164475626 164482795 - MGP_BALBcJ_P0098147 Amelx protein_coding protein_coding MGP_BALBcJ_T0098148.1 MGP_BALBcJ_G0036240.1 mouse_genomes_project X 164475626 164482795 - MGP_BALBcJ_P0098148 Amelx protein_coding protein_coding MGP_BALBcJ_T0098149.1 MGP_BALBcJ_G0036240.1 mouse_genomes_project X 164475626 164482795 - MGP_BALBcJ_P0098149 Amelx protein_coding protein_coding MGP_BALBcJ_T0097288.1 MGP_BALBcJ_G0036003.1 mouse_genomes_project X 107552428 107612745 + MGP_BALBcJ_P0097288 Apool protein_coding protein_coding MGP_BALBcJ_T0097289.1 MGP_BALBcJ_G0036003.1 mouse_genomes_project X 107552442 107588472 + Apool protein_coding retained_intron MGP_BALBcJ_T0097290.1 MGP_BALBcJ_G0036003.1 mouse_genomes_project X 107552460 107612425 + MGP_BALBcJ_P0097290 Apool protein_coding protein_coding MGP_BALBcJ_T0016310.1 MGP_BALBcJ_G0014407.1 mouse_genomes_project X 53566241 53568793 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005554.1 MGP_BALBcJ_G0004682.1 mouse_genomes_project X 31643704 31644856 + Gm15008 antisense antisense MGP_BALBcJ_T0016467.1 MGP_BALBcJ_G0014564.1 mouse_genomes_project X 87012854 87013049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016842.1 MGP_BALBcJ_G0014939.1 mouse_genomes_project X 158563093 158563563 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009396.1 MGP_BALBcJ_G0007532.1 mouse_genomes_project X 108181695 108217207 - Gm14936 lincRNA lincRNA MGP_BALBcJ_T0097400.1 MGP_BALBcJ_G0036044.1 mouse_genomes_project X 129579209 129625525 - MGP_BALBcJ_P0097400 Btk protein_coding protein_coding MGP_BALBcJ_T0097401.1 MGP_BALBcJ_G0036044.1 mouse_genomes_project X 129579243 129625513 - MGP_BALBcJ_P0097401 Btk protein_coding protein_coding MGP_BALBcJ_T0097402.1 MGP_BALBcJ_G0036044.1 mouse_genomes_project X 129586099 129625525 - Btk protein_coding retained_intron MGP_BALBcJ_T0097403.1 MGP_BALBcJ_G0036044.1 mouse_genomes_project X 129608497 129624858 - Btk protein_coding processed_transcript MGP_BALBcJ_T0097404.1 MGP_BALBcJ_G0036044.1 mouse_genomes_project X 129613816 129625954 - Btk protein_coding processed_transcript MGP_BALBcJ_T0016473.1 MGP_BALBcJ_G0014570.1 mouse_genomes_project X 88804197 88804468 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016237.1 MGP_BALBcJ_G0014334.1 mouse_genomes_project X 34521616 34522186 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016708.1 MGP_BALBcJ_G0014805.1 mouse_genomes_project X 134422184 134422894 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098696.1 MGP_BALBcJ_G0036750.1 mouse_genomes_project X 98198230 98198331 - Gm24509 rRNA rRNA MGP_BALBcJ_T0095504.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2330554 2340179 - MGP_BALBcJ_P0095504 Ccdc120 protein_coding protein_coding MGP_BALBcJ_T0095505.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2336799 2339048 - MGP_BALBcJ_P0095505 Ccdc120 protein_coding protein_coding MGP_BALBcJ_T0095506.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2337056 2340146 - Ccdc120 protein_coding processed_transcript MGP_BALBcJ_T0095507.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2337070 2339069 - Ccdc120 protein_coding processed_transcript MGP_BALBcJ_T0095508.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2337081 2340162 - Ccdc120 protein_coding processed_transcript MGP_BALBcJ_T0095509.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2337208 2339045 - Ccdc120 protein_coding processed_transcript MGP_BALBcJ_T0095510.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2337298 2349649 - Ccdc120 protein_coding processed_transcript MGP_BALBcJ_T0095511.1 MGP_BALBcJ_G0035496.1 mouse_genomes_project X 2337351 2349641 - Ccdc120 protein_coding processed_transcript MGP_BALBcJ_T0097157.1 MGP_BALBcJ_G0035964.1 mouse_genomes_project X 100251831 100254147 - MGP_BALBcJ_P0097157 Magee2 protein_coding protein_coding MGP_BALBcJ_T0016819.1 MGP_BALBcJ_G0014916.1 mouse_genomes_project X 154351419 154352157 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095653.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4830776 4974745 - MGP_BALBcJ_P0095653 Rpgr protein_coding protein_coding MGP_BALBcJ_T0095654.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4915434 4974745 - MGP_BALBcJ_P0095654 Rpgr protein_coding protein_coding MGP_BALBcJ_T0095655.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4915443 4974518 - MGP_BALBcJ_P0095655 Rpgr protein_coding protein_coding MGP_BALBcJ_T0095656.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4917925 4974745 - MGP_BALBcJ_P0095656 Rpgr protein_coding protein_coding MGP_BALBcJ_T0095657.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4938305 4974583 - Rpgr protein_coding retained_intron MGP_BALBcJ_T0095658.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4964825 4974558 - Rpgr protein_coding retained_intron MGP_BALBcJ_T0095659.1 MGP_BALBcJ_G0035532.1 mouse_genomes_project X 4971372 4974307 - Rpgr protein_coding processed_transcript MGP_BALBcJ_T0016846.1 MGP_BALBcJ_G0014943.1 mouse_genomes_project X 159730087 159732492 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097319.1 MGP_BALBcJ_G0036015.1 mouse_genomes_project X 111727325 111727673 + MGP_BALBcJ_P0097319 H2afb2 protein_coding protein_coding MGP_BALBcJ_T0095600.1 MGP_BALBcJ_G0035515.1 mouse_genomes_project X 2758357 2760591 - Rbm3 protein_coding processed_transcript MGP_BALBcJ_T0095601.1 MGP_BALBcJ_G0035515.1 mouse_genomes_project X 2758360 2765709 - MGP_BALBcJ_P0095601 Rbm3 protein_coding protein_coding MGP_BALBcJ_T0095602.1 MGP_BALBcJ_G0035515.1 mouse_genomes_project X 2760166 2765691 - MGP_BALBcJ_P0095602 Rbm3 protein_coding protein_coding MGP_BALBcJ_T0095603.1 MGP_BALBcJ_G0035515.1 mouse_genomes_project X 2762469 2765709 - MGP_BALBcJ_P0095603 Rbm3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095604.1 MGP_BALBcJ_G0035515.1 mouse_genomes_project X 2762692 2765734 - Rbm3 protein_coding retained_intron MGP_BALBcJ_T0095605.1 MGP_BALBcJ_G0035515.1 mouse_genomes_project X 2764485 2765771 - Rbm3 protein_coding retained_intron MGP_BALBcJ_T0016333.1 MGP_BALBcJ_G0014430.1 mouse_genomes_project X 57046678 57047908 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016176.1 MGP_BALBcJ_G0014273.1 mouse_genomes_project X 8044167 8045394 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097865.1 MGP_BALBcJ_G0036167.1 mouse_genomes_project X 149014503 149015789 + MGP_BALBcJ_P0097865 Spin2c protein_coding protein_coding MGP_BALBcJ_T0097866.1 MGP_BALBcJ_G0036167.1 mouse_genomes_project X 149014519 149015802 + MGP_BALBcJ_P0097866 Spin2c protein_coding protein_coding MGP_BALBcJ_T0097867.1 MGP_BALBcJ_G0036167.1 mouse_genomes_project X 149014571 149016522 + MGP_BALBcJ_P0097867 Spin2c protein_coding protein_coding MGP_BALBcJ_T0005591.1 MGP_BALBcJ_G0004711.1 mouse_genomes_project X 155756884 155768626 - Gm15241 antisense antisense MGP_BALBcJ_T0097347.1 MGP_BALBcJ_G0036028.1 mouse_genomes_project X 128605956 128711520 - MGP_BALBcJ_P0097347 Pcdh19 protein_coding protein_coding MGP_BALBcJ_T0097348.1 MGP_BALBcJ_G0036028.1 mouse_genomes_project X 128605971 128709863 - MGP_BALBcJ_P0097348 Pcdh19 protein_coding protein_coding MGP_BALBcJ_T0097349.1 MGP_BALBcJ_G0036028.1 mouse_genomes_project X 128605975 128708492 - MGP_BALBcJ_P0097349 Pcdh19 protein_coding protein_coding MGP_BALBcJ_T0097350.1 MGP_BALBcJ_G0036028.1 mouse_genomes_project X 128605976 128611108 - MGP_BALBcJ_P0097350 Pcdh19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097351.1 MGP_BALBcJ_G0036028.1 mouse_genomes_project X 128703948 128707590 - Pcdh19 protein_coding processed_transcript MGP_BALBcJ_T0016560.1 MGP_BALBcJ_G0014657.1 mouse_genomes_project X 100888944 100889550 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005595.1 MGP_BALBcJ_G0004715.1 mouse_genomes_project X 164336614 164406068 - Gm15261 antisense antisense MGP_BALBcJ_T0095724.1 MGP_BALBcJ_G0035552.1 mouse_genomes_project X 11896894 12088019 - MGP_BALBcJ_P0095724 Efhc2 protein_coding protein_coding MGP_BALBcJ_T0016845.1 MGP_BALBcJ_G0014942.1 mouse_genomes_project X 159228004 159228180 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097648.1 MGP_BALBcJ_G0036124.1 mouse_genomes_project X 138925936 138952870 - MGP_BALBcJ_P0097648 Capn6 protein_coding protein_coding MGP_BALBcJ_T0097649.1 MGP_BALBcJ_G0036124.1 mouse_genomes_project X 138941493 138952788 - Capn6 protein_coding retained_intron MGP_BALBcJ_T0095458.1 MGP_BALBcJ_G0035487.1 mouse_genomes_project X 2186023 2198069 - MGP_BALBcJ_P0095458 Ccdc22 protein_coding protein_coding MGP_BALBcJ_T0095459.1 MGP_BALBcJ_G0035487.1 mouse_genomes_project X 2186024 2189494 - Ccdc22 protein_coding retained_intron MGP_BALBcJ_T0016854.1 MGP_BALBcJ_G0014951.1 mouse_genomes_project X 162202498 162202945 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005579.1 MGP_BALBcJ_G0004704.1 mouse_genomes_project X 98761861 98763074 - Gm26952 antisense antisense MGP_BALBcJ_T0011198.1 MGP_BALBcJ_G0009323.1 mouse_genomes_project X 142263710 142263822 + Mir448 miRNA miRNA MGP_BALBcJ_T0016676.1 MGP_BALBcJ_G0014773.1 mouse_genomes_project X 128432725 128433461 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016238.1 MGP_BALBcJ_G0014335.1 mouse_genomes_project X 34740734 34741163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095952.1 MGP_BALBcJ_G0035637.1 mouse_genomes_project X 33359181 33363484 - MGP_BALBcJ_P0095952 C1galt1c1 protein_coding protein_coding MGP_BALBcJ_T0016600.1 MGP_BALBcJ_G0014697.1 mouse_genomes_project X 108000631 108001612 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096443.1 MGP_BALBcJ_G0035791.1 mouse_genomes_project X 68896124 68898451 + MGP_BALBcJ_P0096443 Avpr2 protein_coding protein_coding MGP_BALBcJ_T0096444.1 MGP_BALBcJ_G0035791.1 mouse_genomes_project X 68896125 68897444 + Avpr2 protein_coding processed_transcript MGP_BALBcJ_T0096445.1 MGP_BALBcJ_G0035791.1 mouse_genomes_project X 68896132 68899525 + MGP_BALBcJ_P0096445 Avpr2 protein_coding protein_coding MGP_BALBcJ_T0096446.1 MGP_BALBcJ_G0035791.1 mouse_genomes_project X 68896136 68898220 + MGP_BALBcJ_P0096446 Avpr2 protein_coding protein_coding MGP_BALBcJ_T0100262.1 MGP_BALBcJ_G0038298.1 mouse_genomes_project X 61776677 61776816 + Gm23000 snRNA snRNA MGP_BALBcJ_T0095847.1 MGP_BALBcJ_G0035590.1 mouse_genomes_project X 31162358 31168506 - Gm14569 protein_coding processed_transcript MGP_BALBcJ_T0095848.1 MGP_BALBcJ_G0035590.1 mouse_genomes_project X 31162358 31165438 - Gm14569 protein_coding processed_transcript MGP_BALBcJ_T0095849.1 MGP_BALBcJ_G0035590.1 mouse_genomes_project X 31162358 31219353 - MGP_BALBcJ_P0095849 Gm14569 protein_coding protein_coding MGP_BALBcJ_T0095850.1 MGP_BALBcJ_G0035590.1 mouse_genomes_project X 31177639 31211935 - Gm14569 protein_coding processed_transcript MGP_BALBcJ_T0016294.1 MGP_BALBcJ_G0014391.1 mouse_genomes_project X 48256607 48257237 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016859.1 MGP_BALBcJ_G0014956.1 mouse_genomes_project X 163361249 163361718 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016201.1 MGP_BALBcJ_G0014298.1 mouse_genomes_project X 14567568 14567784 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016549.1 MGP_BALBcJ_G0014646.1 mouse_genomes_project X 99073863 99074581 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016509.1 MGP_BALBcJ_G0014606.1 mouse_genomes_project X 94948089 94948383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097994.1 MGP_BALBcJ_G0036200.1 mouse_genomes_project X 156954042 157015416 + MGP_BALBcJ_P0097994 Rai2 protein_coding protein_coding MGP_BALBcJ_T0097995.1 MGP_BALBcJ_G0036200.1 mouse_genomes_project X 156954600 157015418 + MGP_BALBcJ_P0097995 Rai2 protein_coding protein_coding MGP_BALBcJ_T0009337.1 MGP_BALBcJ_G0007497.1 mouse_genomes_project X 5463049 5473115 - Gm10489 lincRNA lincRNA MGP_BALBcJ_T0016781.1 MGP_BALBcJ_G0014878.1 mouse_genomes_project X 146891531 146892247 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095743.1 MGP_BALBcJ_G0035559.1 mouse_genomes_project X 15093094 15129303 + MGP_BALBcJ_P0095743 Rp2 protein_coding protein_coding MGP_BALBcJ_T0095744.1 MGP_BALBcJ_G0035559.1 mouse_genomes_project X 15093094 15129299 + MGP_BALBcJ_P0095744 Rp2 protein_coding protein_coding MGP_BALBcJ_T0095745.1 MGP_BALBcJ_G0035559.1 mouse_genomes_project X 15093172 15129299 + MGP_BALBcJ_P0095745 Rp2 protein_coding protein_coding MGP_BALBcJ_T0095746.1 MGP_BALBcJ_G0035559.1 mouse_genomes_project X 15093188 15135132 + MGP_BALBcJ_P0095746 Rp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095747.1 MGP_BALBcJ_G0035559.1 mouse_genomes_project X 15093232 15135109 + MGP_BALBcJ_P0095747 Rp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102894.1 MGP_BALBcJ_G0040709.1 mouse_genomes_project X 155559092 155559385 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011153.1 MGP_BALBcJ_G0009278.1 mouse_genomes_project X 66505141 66505233 - Gm23945 miRNA miRNA MGP_BALBcJ_T0096231.1 MGP_BALBcJ_G0035726.1 mouse_genomes_project X 55147084 55324540 - MGP_BALBcJ_P0096231 Atp11c protein_coding unknown_likely_coding MGP_BALBcJ_T0096232.1 MGP_BALBcJ_G0035726.1 mouse_genomes_project X 55147093 55531443 - MGP_BALBcJ_P0096232 Atp11c protein_coding protein_coding MGP_BALBcJ_T0096233.1 MGP_BALBcJ_G0035726.1 mouse_genomes_project X 55147096 55324690 - MGP_BALBcJ_P0096233 Atp11c protein_coding protein_coding MGP_BALBcJ_T0096234.1 MGP_BALBcJ_G0035726.1 mouse_genomes_project X 55147096 55324690 - MGP_BALBcJ_P0096234 Atp11c protein_coding protein_coding MGP_BALBcJ_T0096235.1 MGP_BALBcJ_G0035726.1 mouse_genomes_project X 55149426 55190520 - Atp11c protein_coding processed_transcript MGP_BALBcJ_T0096236.1 MGP_BALBcJ_G0035726.1 mouse_genomes_project X 55159294 55531443 - Atp11c protein_coding processed_transcript MGP_BALBcJ_T0016858.1 MGP_BALBcJ_G0014955.1 mouse_genomes_project X 163269972 163270692 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016270.1 MGP_BALBcJ_G0014367.1 mouse_genomes_project X 42128765 42129770 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096977.1 MGP_BALBcJ_G0035911.1 mouse_genomes_project X 95819422 95825378 + MGP_BALBcJ_P0096977 Awat1 protein_coding protein_coding MGP_BALBcJ_T0097670.1 MGP_BALBcJ_G0036127.1 mouse_genomes_project X 139496222 139814458 - MGP_BALBcJ_P0097670 Trpc5 protein_coding protein_coding MGP_BALBcJ_T0097671.1 MGP_BALBcJ_G0036127.1 mouse_genomes_project X 139533425 139814281 - Trpc5 protein_coding retained_intron MGP_BALBcJ_T0096866.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89759885 89766573 - MGP_BALBcJ_P0096866 Maged1 protein_coding protein_coding MGP_BALBcJ_T0096867.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89759887 89762247 - Maged1 protein_coding retained_intron MGP_BALBcJ_T0096868.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89759887 89766420 - Maged1 protein_coding retained_intron MGP_BALBcJ_T0096869.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89759887 89761976 - Maged1 protein_coding retained_intron MGP_BALBcJ_T0096870.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89760493 89762296 - Maged1 protein_coding retained_intron MGP_BALBcJ_T0096871.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89762086 89763238 - Maged1 protein_coding retained_intron MGP_BALBcJ_T0096872.1 MGP_BALBcJ_G0035882.1 mouse_genomes_project X 89764905 89766433 - Maged1 protein_coding retained_intron MGP_BALBcJ_T0016257.1 MGP_BALBcJ_G0014354.1 mouse_genomes_project X 38504922 38505557 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097209.1 MGP_BALBcJ_G0035975.1 mouse_genomes_project X 101775749 101812342 - MGP_BALBcJ_P0097209 Fnd3c2 protein_coding protein_coding MGP_BALBcJ_T0016420.1 MGP_BALBcJ_G0014517.1 mouse_genomes_project X 75625591 75625816 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016660.1 MGP_BALBcJ_G0014757.1 mouse_genomes_project X 124500942 124501728 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097161.1 MGP_BALBcJ_G0035966.1 mouse_genomes_project X 100521429 100524979 + MGP_BALBcJ_P0097161 Magee1 protein_coding protein_coding MGP_BALBcJ_T0016338.1 MGP_BALBcJ_G0014435.1 mouse_genomes_project X 57627873 57628359 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005552.1 MGP_BALBcJ_G0004680.1 mouse_genomes_project X 5473345 5474583 - Gm14493 antisense antisense MGP_BALBcJ_T0097823.1 MGP_BALBcJ_G0036151.1 mouse_genomes_project X 147372748 147413500 + MGP_BALBcJ_P0097823 Kdm5c protein_coding protein_coding MGP_BALBcJ_T0097824.1 MGP_BALBcJ_G0036151.1 mouse_genomes_project X 147372957 147414323 + MGP_BALBcJ_P0097824 Kdm5c protein_coding protein_coding MGP_BALBcJ_T0097825.1 MGP_BALBcJ_G0036151.1 mouse_genomes_project X 147372982 147386470 + Kdm5c protein_coding retained_intron MGP_BALBcJ_T0097826.1 MGP_BALBcJ_G0036151.1 mouse_genomes_project X 147373000 147413504 + MGP_BALBcJ_P0097826 Kdm5c protein_coding protein_coding MGP_BALBcJ_T0097827.1 MGP_BALBcJ_G0036151.1 mouse_genomes_project X 147409537 147411288 + MGP_BALBcJ_P0097827 Kdm5c protein_coding protein_coding MGP_BALBcJ_T0097828.1 MGP_BALBcJ_G0036151.1 mouse_genomes_project X 147411644 147413128 + MGP_BALBcJ_P0097828 Kdm5c protein_coding protein_coding MGP_BALBcJ_T0016499.1 MGP_BALBcJ_G0014596.1 mouse_genomes_project X 92173060 92175425 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016698.1 MGP_BALBcJ_G0014795.1 mouse_genomes_project X 132343580 132344414 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095856.1 MGP_BALBcJ_G0035594.1 mouse_genomes_project X 31527183 31530698 + MGP_BALBcJ_P0095856 Slc25a5 protein_coding protein_coding MGP_BALBcJ_T0095857.1 MGP_BALBcJ_G0035594.1 mouse_genomes_project X 31529169 31530444 + Slc25a5 protein_coding retained_intron MGP_BALBcJ_T0100297.1 MGP_BALBcJ_G0038333.1 mouse_genomes_project X 146401210 146401314 - Gm26441 snRNA snRNA MGP_BALBcJ_T0016355.1 MGP_BALBcJ_G0014452.1 mouse_genomes_project X 62637901 62638818 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016493.1 MGP_BALBcJ_G0014590.1 mouse_genomes_project X 90625372 90627443 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097904.1 MGP_BALBcJ_G0036182.1 mouse_genomes_project X 152835178 152838042 - MGP_BALBcJ_P0097904 Yy2 protein_coding protein_coding MGP_BALBcJ_T0016286.1 MGP_BALBcJ_G0014383.1 mouse_genomes_project X 46246780 46246978 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009338.1 MGP_BALBcJ_G0007498.1 mouse_genomes_project X 7115079 7130150 - Gm14635 lincRNA lincRNA MGP_BALBcJ_T0009339.1 MGP_BALBcJ_G0007498.1 mouse_genomes_project X 7115934 7120520 - Gm14635 lincRNA lincRNA MGP_BALBcJ_T0098123.1 MGP_BALBcJ_G0036235.1 mouse_genomes_project X 162566746 162592316 - MGP_BALBcJ_P0098123 Tlr7 protein_coding protein_coding MGP_BALBcJ_T0098124.1 MGP_BALBcJ_G0036235.1 mouse_genomes_project X 162566748 162592346 - MGP_BALBcJ_P0098124 Tlr7 protein_coding protein_coding MGP_BALBcJ_T0098125.1 MGP_BALBcJ_G0036235.1 mouse_genomes_project X 162567031 162592285 - MGP_BALBcJ_P0098125 Tlr7 protein_coding protein_coding MGP_BALBcJ_T0098126.1 MGP_BALBcJ_G0036235.1 mouse_genomes_project X 162570159 162592279 - MGP_BALBcJ_P0098126 Tlr7 protein_coding protein_coding MGP_BALBcJ_T0098127.1 MGP_BALBcJ_G0036235.1 mouse_genomes_project X 162570173 162592298 - MGP_BALBcJ_P0098127 Tlr7 protein_coding protein_coding MGP_BALBcJ_T0098128.1 MGP_BALBcJ_G0036235.1 mouse_genomes_project X 162579494 162592231 - Tlr7 protein_coding processed_transcript MGP_BALBcJ_T0009399.1 MGP_BALBcJ_G0007535.1 mouse_genomes_project X 114698606 114700563 - Gm14929 lincRNA lincRNA MGP_BALBcJ_T0009342.1 MGP_BALBcJ_G0007500.1 mouse_genomes_project X 9598541 9635363 + Gm14505 lincRNA lincRNA MGP_BALBcJ_T0016611.1 MGP_BALBcJ_G0014708.1 mouse_genomes_project X 109887895 109888333 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016729.1 MGP_BALBcJ_G0014826.1 mouse_genomes_project X 137003288 137003555 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016459.1 MGP_BALBcJ_G0014556.1 mouse_genomes_project X 86349149 86352026 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011204.1 MGP_BALBcJ_G0009329.1 mouse_genomes_project X 158110071 158110149 - Mir3473a miRNA miRNA MGP_BALBcJ_T0016772.1 MGP_BALBcJ_G0014869.1 mouse_genomes_project X 145816697 145817346 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016334.1 MGP_BALBcJ_G0014431.1 mouse_genomes_project X 57121169 57121671 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009340.1 MGP_BALBcJ_G0007499.1 mouse_genomes_project X 8040542 8042185 - 2010308F09Rik lincRNA lincRNA MGP_BALBcJ_T0009341.1 MGP_BALBcJ_G0007499.1 mouse_genomes_project X 8040585 8053573 - 2010308F09Rik lincRNA lincRNA MGP_BALBcJ_T0097872.1 MGP_BALBcJ_G0036172.1 mouse_genomes_project X 150388943 150391701 - MGP_BALBcJ_P0097872 protein_coding protein_coding MGP_BALBcJ_T0098016.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142120 158222140 + MGP_BALBcJ_P0098016 Ctps2 protein_coding protein_coding MGP_BALBcJ_T0098017.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142127 158163734 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098018.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142127 158163409 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098019.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142495 158179282 + MGP_BALBcJ_P0098019 Ctps2 protein_coding unknown_likely_coding MGP_BALBcJ_T0098020.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142496 158268989 + MGP_BALBcJ_P0098020 Ctps2 protein_coding protein_coding MGP_BALBcJ_T0098021.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142523 158269172 + MGP_BALBcJ_P0098021 Ctps2 protein_coding protein_coding MGP_BALBcJ_T0098022.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142660 158269165 + MGP_BALBcJ_P0098022 Ctps2 protein_coding protein_coding MGP_BALBcJ_T0098023.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142676 158144464 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098024.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158142761 158268989 + MGP_BALBcJ_P0098024 Ctps2 protein_coding protein_coding MGP_BALBcJ_T0098025.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158143062 158164605 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098026.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158172149 158179190 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098027.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158183609 158218813 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098028.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158183990 158184280 + Ctps2 protein_coding processed_transcript MGP_BALBcJ_T0098029.1 MGP_BALBcJ_G0036206.1 mouse_genomes_project X 158184096 158269173 + MGP_BALBcJ_P0098029 Ctps2 protein_coding protein_coding MGP_BALBcJ_T0016773.1 MGP_BALBcJ_G0014870.1 mouse_genomes_project X 145832574 145833169 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097479.1 MGP_BALBcJ_G0036065.1 mouse_genomes_project X 131368786 131379395 + MGP_BALBcJ_P0097479 Tceal7 protein_coding protein_coding MGP_BALBcJ_T0097480.1 MGP_BALBcJ_G0036065.1 mouse_genomes_project X 131378048 131380108 + MGP_BALBcJ_P0097480 Tceal7 protein_coding protein_coding MGP_BALBcJ_T0098056.1 MGP_BALBcJ_G0036216.1 mouse_genomes_project X 159449168 159515776 - MGP_BALBcJ_P0098056 Bmx protein_coding protein_coding MGP_BALBcJ_T0098057.1 MGP_BALBcJ_G0036216.1 mouse_genomes_project X 159449681 159507963 - MGP_BALBcJ_P0098057 Bmx protein_coding protein_coding MGP_BALBcJ_T0096406.1 MGP_BALBcJ_G0035785.1 mouse_genomes_project X 68778014 68782535 + Srpk3 protein_coding retained_intron MGP_BALBcJ_T0096407.1 MGP_BALBcJ_G0035785.1 mouse_genomes_project X 68778014 68782535 + MGP_BALBcJ_P0096407 Srpk3 protein_coding protein_coding MGP_BALBcJ_T0096408.1 MGP_BALBcJ_G0035785.1 mouse_genomes_project X 68781554 68782212 + Srpk3 protein_coding retained_intron MGP_BALBcJ_T0096409.1 MGP_BALBcJ_G0035785.1 mouse_genomes_project X 68781587 68782338 + Srpk3 protein_coding retained_intron MGP_BALBcJ_T0101565.1 MGP_BALBcJ_G0039601.1 mouse_genomes_project X 157981096 157981217 + Gm23786 snoRNA snoRNA MGP_BALBcJ_T0100290.1 MGP_BALBcJ_G0038326.1 mouse_genomes_project X 129527642 129527749 + Gm23124 snRNA snRNA MGP_BALBcJ_T0096683.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157109 70171152 + MGP_BALBcJ_P0096683 Dkc1 protein_coding protein_coding MGP_BALBcJ_T0096684.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157308 70163798 + MGP_BALBcJ_P0096684 Dkc1 protein_coding protein_coding MGP_BALBcJ_T0096685.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157341 70160143 + MGP_BALBcJ_P0096685 Dkc1 protein_coding protein_coding MGP_BALBcJ_T0096686.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157354 70160053 + Dkc1 protein_coding retained_intron MGP_BALBcJ_T0096687.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157356 70160203 + Dkc1 protein_coding processed_transcript MGP_BALBcJ_T0096688.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157370 70163720 + MGP_BALBcJ_P0096688 Dkc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096689.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70157801 70160075 + Dkc1 protein_coding retained_intron MGP_BALBcJ_T0096690.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70161173 70168586 + Dkc1 protein_coding retained_intron MGP_BALBcJ_T0096691.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70161308 70169618 + MGP_BALBcJ_P0096691 Dkc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096692.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70161514 70167093 + Dkc1 protein_coding processed_transcript MGP_BALBcJ_T0096693.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70162198 70167141 + Dkc1 protein_coding processed_transcript MGP_BALBcJ_T0096694.1 MGP_BALBcJ_G0035822.1 mouse_genomes_project X 70167323 70169651 + Dkc1 protein_coding retained_intron MGP_BALBcJ_T0096570.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69291215 69292219 + Taz protein_coding processed_transcript MGP_BALBcJ_T0096571.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69291215 69292169 + Taz protein_coding processed_transcript MGP_BALBcJ_T0096572.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292000 69299455 + MGP_BALBcJ_P0096572 Taz protein_coding protein_coding MGP_BALBcJ_T0096573.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292053 69295191 + Taz protein_coding retained_intron MGP_BALBcJ_T0096574.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292053 69297339 + Taz protein_coding retained_intron MGP_BALBcJ_T0096575.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292053 69299452 + Taz protein_coding retained_intron MGP_BALBcJ_T0096576.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292053 69299452 + MGP_BALBcJ_P0096576 Taz protein_coding protein_coding MGP_BALBcJ_T0096577.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292063 69297583 + Taz protein_coding retained_intron MGP_BALBcJ_T0096578.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292063 69298008 + Taz protein_coding retained_intron MGP_BALBcJ_T0096579.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292065 69299452 + MGP_BALBcJ_P0096579 Taz protein_coding protein_coding MGP_BALBcJ_T0096580.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292069 69293273 + Taz protein_coding retained_intron MGP_BALBcJ_T0096581.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292075 69298462 + MGP_BALBcJ_P0096581 Taz protein_coding protein_coding MGP_BALBcJ_T0096582.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292092 69293618 + Taz protein_coding retained_intron MGP_BALBcJ_T0096583.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292224 69298148 + Taz protein_coding retained_intron MGP_BALBcJ_T0096584.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292311 69298704 + MGP_BALBcJ_P0096584 Taz protein_coding protein_coding MGP_BALBcJ_T0096585.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69292385 69298789 + MGP_BALBcJ_P0096585 Taz protein_coding protein_coding MGP_BALBcJ_T0096586.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69293240 69298652 + MGP_BALBcJ_P0096586 Taz protein_coding protein_coding MGP_BALBcJ_T0096587.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69296968 69297913 + Taz protein_coding retained_intron MGP_BALBcJ_T0096588.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69297323 69299038 + MGP_BALBcJ_P0096588 Taz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096589.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69297375 69299192 + MGP_BALBcJ_P0096589 Taz protein_coding protein_coding MGP_BALBcJ_T0096590.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69297965 69299035 + MGP_BALBcJ_P0096590 Taz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096591.1 MGP_BALBcJ_G0035804.1 mouse_genomes_project X 69297976 69298985 + Taz protein_coding retained_intron MGP_BALBcJ_T0016803.1 MGP_BALBcJ_G0014900.1 mouse_genomes_project X 152270747 152272049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101787.1 MGP_BALBcJ_G0039730.1 mouse_genomes_project X 9905923 9906805 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101788.1 MGP_BALBcJ_G0039730.1 mouse_genomes_project X 9906170 9906719 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0095551.1 MGP_BALBcJ_G0035502.1 mouse_genomes_project X 2496018 2506604 + MGP_BALBcJ_P0095551 Slc35a2 protein_coding protein_coding MGP_BALBcJ_T0095552.1 MGP_BALBcJ_G0035502.1 mouse_genomes_project X 2496221 2506576 + MGP_BALBcJ_P0095552 Slc35a2 protein_coding protein_coding MGP_BALBcJ_T0095553.1 MGP_BALBcJ_G0035502.1 mouse_genomes_project X 2496300 2506139 + MGP_BALBcJ_P0095553 Slc35a2 protein_coding protein_coding MGP_BALBcJ_T0095554.1 MGP_BALBcJ_G0035502.1 mouse_genomes_project X 2496355 2506574 + MGP_BALBcJ_P0095554 Slc35a2 protein_coding protein_coding MGP_BALBcJ_T0095555.1 MGP_BALBcJ_G0035502.1 mouse_genomes_project X 2497813 2506572 + MGP_BALBcJ_P0095555 Slc35a2 protein_coding protein_coding MGP_BALBcJ_T0095556.1 MGP_BALBcJ_G0035502.1 mouse_genomes_project X 2505132 2506576 + Slc35a2 protein_coding processed_transcript MGP_BALBcJ_T0095671.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6813302 6857312 - MGP_BALBcJ_P0095671 Bcor protein_coding protein_coding MGP_BALBcJ_T0095672.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6813302 6857312 - MGP_BALBcJ_P0095672 Bcor protein_coding protein_coding MGP_BALBcJ_T0095673.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6813302 6857312 - MGP_BALBcJ_P0095673 Bcor protein_coding protein_coding MGP_BALBcJ_T0095674.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6813302 6857312 - MGP_BALBcJ_P0095674 Bcor protein_coding protein_coding MGP_BALBcJ_T0095675.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6813305 6939765 - MGP_BALBcJ_P0095675 Bcor protein_coding protein_coding MGP_BALBcJ_T0095676.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6835510 6907547 - MGP_BALBcJ_P0095676 Bcor protein_coding protein_coding MGP_BALBcJ_T0095677.1 MGP_BALBcJ_G0035537.1 mouse_genomes_project X 6835600 6907497 - MGP_BALBcJ_P0095677 Bcor protein_coding protein_coding MGP_BALBcJ_T0016659.1 MGP_BALBcJ_G0014756.1 mouse_genomes_project X 124482960 124483962 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016419.1 MGP_BALBcJ_G0014516.1 mouse_genomes_project X 75539015 75540400 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016531.1 MGP_BALBcJ_G0014628.1 mouse_genomes_project X 98391531 98392276 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097267.1 MGP_BALBcJ_G0035997.1 mouse_genomes_project X 106533274 106533628 + MGP_BALBcJ_P0097267 Gm10112 protein_coding protein_coding MGP_BALBcJ_T0100307.1 MGP_BALBcJ_G0038343.1 mouse_genomes_project X 159525905 159526011 - Gm25367 snRNA snRNA MGP_BALBcJ_T0095924.1 MGP_BALBcJ_G0035629.1 mouse_genomes_project X 32808345 32816588 - MGP_BALBcJ_P0095924 Rhox12 protein_coding protein_coding MGP_BALBcJ_T0095925.1 MGP_BALBcJ_G0035629.1 mouse_genomes_project X 32808446 32812667 - MGP_BALBcJ_P0095925 Rhox12 protein_coding protein_coding MGP_BALBcJ_T0095926.1 MGP_BALBcJ_G0035629.1 mouse_genomes_project X 32809845 32816468 - MGP_BALBcJ_P0095926 Rhox12 protein_coding protein_coding MGP_BALBcJ_T0016678.1 MGP_BALBcJ_G0014775.1 mouse_genomes_project X 129588766 129589131 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016151.1 MGP_BALBcJ_G0014248.1 mouse_genomes_project X 2652981 2653367 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011141.1 MGP_BALBcJ_G0009266.1 mouse_genomes_project X 61839103 61839178 - Mir463 miRNA miRNA MGP_BALBcJ_T0096187.1 MGP_BALBcJ_G0035713.1 mouse_genomes_project X 52009449 52015134 + MGP_BALBcJ_P0096187 Brs3 protein_coding protein_coding MGP_BALBcJ_T0009355.1 MGP_BALBcJ_G0007509.1 mouse_genomes_project X 41180831 41470460 - lincRNA lincRNA MGP_BALBcJ_T0016621.1 MGP_BALBcJ_G0014718.1 mouse_genomes_project X 111251937 111252272 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016279.1 MGP_BALBcJ_G0014376.1 mouse_genomes_project X 45145688 45146071 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016533.1 MGP_BALBcJ_G0014630.1 mouse_genomes_project X 98421030 98421543 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016174.1 MGP_BALBcJ_G0014271.1 mouse_genomes_project X 7717825 7719082 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016434.1 MGP_BALBcJ_G0014531.1 mouse_genomes_project X 80705899 80706267 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011763.1 MGP_BALBcJ_G0009888.1 mouse_genomes_project X 157557559 157557833 - Gm23867 misc_RNA misc_RNA MGP_BALBcJ_T0097810.1 MGP_BALBcJ_G0036149.1 mouse_genomes_project X 147153595 147173699 + MGP_BALBcJ_P0097810 Smc1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097811.1 MGP_BALBcJ_G0036149.1 mouse_genomes_project X 147153595 147199835 + MGP_BALBcJ_P0097811 Smc1a protein_coding protein_coding MGP_BALBcJ_T0097812.1 MGP_BALBcJ_G0036149.1 mouse_genomes_project X 147173933 147175545 + Smc1a protein_coding retained_intron MGP_BALBcJ_T0097813.1 MGP_BALBcJ_G0036149.1 mouse_genomes_project X 147183783 147185091 + Smc1a protein_coding retained_intron MGP_BALBcJ_T0097814.1 MGP_BALBcJ_G0036149.1 mouse_genomes_project X 147195607 147196649 + Smc1a protein_coding retained_intron MGP_BALBcJ_T0097815.1 MGP_BALBcJ_G0036149.1 mouse_genomes_project X 147196215 147196921 + Smc1a protein_coding retained_intron MGP_BALBcJ_T0016353.1 MGP_BALBcJ_G0014450.1 mouse_genomes_project X 62018496 62019021 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096155.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51404133 51456977 + Ddx26b protein_coding processed_transcript MGP_BALBcJ_T0096156.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51404153 51456976 + MGP_BALBcJ_P0096156 Ddx26b protein_coding protein_coding MGP_BALBcJ_T0096157.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51404156 51444875 + MGP_BALBcJ_P0096157 Ddx26b protein_coding protein_coding MGP_BALBcJ_T0096158.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51404161 51456977 + MGP_BALBcJ_P0096158 Ddx26b protein_coding protein_coding MGP_BALBcJ_T0096159.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51404161 51456980 + MGP_BALBcJ_P0096159 Ddx26b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096160.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51432989 51456975 + MGP_BALBcJ_P0096160 Ddx26b protein_coding protein_coding MGP_BALBcJ_T0096161.1 MGP_BALBcJ_G0035705.1 mouse_genomes_project X 51454225 51456822 + MGP_BALBcJ_P0096161 Ddx26b protein_coding protein_coding MGP_BALBcJ_T0016711.1 MGP_BALBcJ_G0014808.1 mouse_genomes_project X 134913004 134914978 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016594.1 MGP_BALBcJ_G0014691.1 mouse_genomes_project X 107543748 107544020 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097007.1 MGP_BALBcJ_G0035918.1 mouse_genomes_project X 96079766 96304581 - MGP_BALBcJ_P0097007 Tex11 protein_coding protein_coding MGP_BALBcJ_T0097008.1 MGP_BALBcJ_G0035918.1 mouse_genomes_project X 96079766 96304609 - MGP_BALBcJ_P0097008 Tex11 protein_coding protein_coding MGP_BALBcJ_T0097009.1 MGP_BALBcJ_G0035918.1 mouse_genomes_project X 96115894 96304609 - MGP_BALBcJ_P0097009 Tex11 protein_coding protein_coding MGP_BALBcJ_T0096349.1 MGP_BALBcJ_G0035766.1 mouse_genomes_project X 67833669 67836997 - MGP_BALBcJ_P0096349 Cetn2 protein_coding protein_coding MGP_BALBcJ_T0096350.1 MGP_BALBcJ_G0035766.1 mouse_genomes_project X 67834169 67838456 - MGP_BALBcJ_P0096350 Cetn2 protein_coding protein_coding MGP_BALBcJ_T0096351.1 MGP_BALBcJ_G0035766.1 mouse_genomes_project X 67835054 67838424 - MGP_BALBcJ_P0096351 Cetn2 protein_coding protein_coding MGP_BALBcJ_T0096649.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69406512 69447545 + MGP_BALBcJ_P0096649 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096650.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69406513 69465683 + MGP_BALBcJ_P0096650 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096651.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69406513 69465683 + MGP_BALBcJ_P0096651 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096652.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69406549 69453440 + MGP_BALBcJ_P0096652 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096656.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69438085 69453502 + MGP_BALBcJ_P0096656 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096657.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69438155 69460646 + MGP_BALBcJ_P0096657 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096658.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69438163 69465683 + MGP_BALBcJ_P0096658 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096659.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69438163 69465759 + MGP_BALBcJ_P0096659 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096660.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69438184 69461005 + MGP_BALBcJ_P0096660 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096661.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69438189 69446420 + MGP_BALBcJ_P0096661 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096663.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69441453 69450722 + MGP_BALBcJ_P0096663 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096664.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69442832 69456909 + MGP_BALBcJ_P0096664 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096665.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69442866 69465683 + MGP_BALBcJ_P0096665 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096666.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69443222 69462191 + MGP_BALBcJ_P0096666 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096667.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69443255 69463425 + MGP_BALBcJ_P0096667 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096668.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69443273 69446907 + Ikbkg protein_coding retained_intron MGP_BALBcJ_T0096669.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69443314 69457406 + MGP_BALBcJ_P0096669 Ikbkg protein_coding protein_coding MGP_BALBcJ_T0096670.1 MGP_BALBcJ_G0035813.1 mouse_genomes_project X 69452438 69460128 + Ikbkg protein_coding processed_transcript MGP_BALBcJ_T0098705.1 MGP_BALBcJ_G0036759.1 mouse_genomes_project X 159388551 159388672 + n-R5s18 rRNA rRNA MGP_BALBcJ_T0016477.1 MGP_BALBcJ_G0014574.1 mouse_genomes_project X 89192181 89192948 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095882.1 MGP_BALBcJ_G0035603.1 mouse_genomes_project X 31885509 31903611 - MGP_BALBcJ_P0095882 Akap14 protein_coding protein_coding MGP_BALBcJ_T0097112.1 MGP_BALBcJ_G0035943.1 mouse_genomes_project X 97570410 97779060 - MGP_BALBcJ_P0097112 Hdac8 protein_coding protein_coding MGP_BALBcJ_T0097113.1 MGP_BALBcJ_G0035943.1 mouse_genomes_project X 97684178 97778782 - MGP_BALBcJ_P0097113 Hdac8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097114.1 MGP_BALBcJ_G0035943.1 mouse_genomes_project X 97686133 97778847 - Hdac8 protein_coding processed_transcript MGP_BALBcJ_T0097115.1 MGP_BALBcJ_G0035943.1 mouse_genomes_project X 97692889 97779046 - Hdac8 protein_coding processed_transcript MGP_BALBcJ_T0097116.1 MGP_BALBcJ_G0035943.1 mouse_genomes_project X 97771861 97778442 - Hdac8 protein_coding retained_intron MGP_BALBcJ_T0016782.1 MGP_BALBcJ_G0014879.1 mouse_genomes_project X 146913071 146913458 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016352.1 MGP_BALBcJ_G0014449.1 mouse_genomes_project X 62018493 62019022 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009425.1 MGP_BALBcJ_G0007552.1 mouse_genomes_project X 162350129 162364141 - Gm15232 lincRNA lincRNA MGP_BALBcJ_T0016220.1 MGP_BALBcJ_G0014317.1 mouse_genomes_project X 30526753 30527986 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097548.1 MGP_BALBcJ_G0036090.1 mouse_genomes_project X 134567156 134571483 + MGP_BALBcJ_P0097548 Trap1a protein_coding protein_coding MGP_BALBcJ_T0016744.1 MGP_BALBcJ_G0014841.1 mouse_genomes_project X 139345412 139346235 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096975.1 MGP_BALBcJ_G0035910.1 mouse_genomes_project X 95773009 95793933 + Dgat2l6 protein_coding retained_intron MGP_BALBcJ_T0096976.1 MGP_BALBcJ_G0035910.1 mouse_genomes_project X 95773012 95794186 + MGP_BALBcJ_P0096976 Dgat2l6 protein_coding protein_coding MGP_BALBcJ_T0016771.1 MGP_BALBcJ_G0014868.1 mouse_genomes_project X 145590011 145592442 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011166.1 MGP_BALBcJ_G0009291.1 mouse_genomes_project X 89607005 89607115 - Gm44477 miRNA miRNA MGP_BALBcJ_T0095588.1 MGP_BALBcJ_G0035513.1 mouse_genomes_project X 2697966 2707035 - MGP_BALBcJ_P0095588 Was protein_coding protein_coding MGP_BALBcJ_T0095589.1 MGP_BALBcJ_G0035513.1 mouse_genomes_project X 2702928 2705302 - Was protein_coding retained_intron MGP_BALBcJ_T0016558.1 MGP_BALBcJ_G0014655.1 mouse_genomes_project X 100542786 100543813 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016148.1 MGP_BALBcJ_G0014245.1 mouse_genomes_project X 2350873 2351158 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096347.1 MGP_BALBcJ_G0035765.1 mouse_genomes_project X 67749572 67766998 + MGP_BALBcJ_P0096347 Gabrq protein_coding protein_coding MGP_BALBcJ_T0096348.1 MGP_BALBcJ_G0035765.1 mouse_genomes_project X 67749830 67762939 + MGP_BALBcJ_P0096348 Gabrq protein_coding protein_coding MGP_BALBcJ_T0016340.1 MGP_BALBcJ_G0014437.1 mouse_genomes_project X 58070696 58071609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098111.1 MGP_BALBcJ_G0036231.1 mouse_genomes_project X 161770796 161781636 - MGP_BALBcJ_P0098111 Tceanc protein_coding protein_coding MGP_BALBcJ_T0098112.1 MGP_BALBcJ_G0036231.1 mouse_genomes_project X 161773303 161774383 - MGP_BALBcJ_P0098112 Tceanc protein_coding protein_coding MGP_BALBcJ_T0098113.1 MGP_BALBcJ_G0036231.1 mouse_genomes_project X 161774277 161789772 - MGP_BALBcJ_P0098113 Tceanc protein_coding protein_coding MGP_BALBcJ_T0096973.1 MGP_BALBcJ_G0035909.1 mouse_genomes_project X 95742000 95764291 + MGP_BALBcJ_P0096973 Igbp1 protein_coding protein_coding MGP_BALBcJ_T0096974.1 MGP_BALBcJ_G0035909.1 mouse_genomes_project X 95742064 95747112 + Igbp1 protein_coding retained_intron MGP_BALBcJ_T0011099.1 MGP_BALBcJ_G0009224.1 mouse_genomes_project X 8457226 8457295 + Gm25246 miRNA miRNA MGP_BALBcJ_T0016651.1 MGP_BALBcJ_G0014748.1 mouse_genomes_project X 117730466 117731207 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097206.1 MGP_BALBcJ_G0035974.1 mouse_genomes_project X 101608609 101622432 - MGP_BALBcJ_P0097206 Taf9b protein_coding protein_coding MGP_BALBcJ_T0097207.1 MGP_BALBcJ_G0035974.1 mouse_genomes_project X 101608609 101621175 - MGP_BALBcJ_P0097207 Taf9b protein_coding protein_coding MGP_BALBcJ_T0097208.1 MGP_BALBcJ_G0035974.1 mouse_genomes_project X 101619613 101622024 - MGP_BALBcJ_P0097208 Taf9b protein_coding protein_coding MGP_BALBcJ_T0011195.1 MGP_BALBcJ_G0009320.1 mouse_genomes_project X 142121452 142121538 + Mir1264 miRNA miRNA MGP_BALBcJ_T0096751.1 MGP_BALBcJ_G0035841.1 mouse_genomes_project X 73126788 73206101 + MGP_BALBcJ_P0096751 protein_coding protein_coding MGP_BALBcJ_T0096752.1 MGP_BALBcJ_G0035841.1 mouse_genomes_project X 73128181 73205168 + protein_coding retained_intron MGP_BALBcJ_T0097086.1 MGP_BALBcJ_G0035933.1 mouse_genomes_project X 96998532 97001267 - MGP_BALBcJ_P0097086 Cxcr3 protein_coding protein_coding MGP_BALBcJ_T0016424.1 MGP_BALBcJ_G0014521.1 mouse_genomes_project X 77290623 77290909 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011108.1 MGP_BALBcJ_G0009233.1 mouse_genomes_project X 33477405 33477471 - Gm25642 miRNA miRNA MGP_BALBcJ_T0097266.1 MGP_BALBcJ_G0035996.1 mouse_genomes_project X 106481146 106494103 + MGP_BALBcJ_P0097266 Cylc1 protein_coding protein_coding MGP_BALBcJ_T0097281.1 MGP_BALBcJ_G0036000.1 mouse_genomes_project X 106824632 106927153 - MGP_BALBcJ_P0097281 Hdx protein_coding unknown_likely_coding MGP_BALBcJ_T0016348.1 MGP_BALBcJ_G0014445.1 mouse_genomes_project X 60994657 60996785 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095873.1 MGP_BALBcJ_G0035599.1 mouse_genomes_project X 31784135 31785709 + MGP_BALBcJ_P0095873 Sowahd protein_coding protein_coding MGP_BALBcJ_T0009373.1 MGP_BALBcJ_G0007522.1 mouse_genomes_project X 86726096 86726824 - BC061195 lincRNA lincRNA MGP_BALBcJ_T0016399.1 MGP_BALBcJ_G0014496.1 mouse_genomes_project X 72088362 72088801 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097597.1 MGP_BALBcJ_G0036104.1 mouse_genomes_project X 135907264 135921663 + MGP_BALBcJ_P0097597 Mid2 protein_coding protein_coding MGP_BALBcJ_T0097598.1 MGP_BALBcJ_G0036104.1 mouse_genomes_project X 135907621 136015838 + MGP_BALBcJ_P0097598 Mid2 protein_coding protein_coding MGP_BALBcJ_T0097599.1 MGP_BALBcJ_G0036104.1 mouse_genomes_project X 135907737 136012118 + MGP_BALBcJ_P0097599 Mid2 protein_coding protein_coding MGP_BALBcJ_T0097600.1 MGP_BALBcJ_G0036104.1 mouse_genomes_project X 135920982 136015838 + MGP_BALBcJ_P0097600 Mid2 protein_coding protein_coding MGP_BALBcJ_T0097601.1 MGP_BALBcJ_G0036104.1 mouse_genomes_project X 135996810 135999961 + Mid2 protein_coding retained_intron MGP_BALBcJ_T0096729.1 MGP_BALBcJ_G0035830.1 mouse_genomes_project X 70585071 70594820 + MGP_BALBcJ_P0096729 Vbp1 protein_coding protein_coding MGP_BALBcJ_T0096730.1 MGP_BALBcJ_G0035830.1 mouse_genomes_project X 70585071 70605708 + MGP_BALBcJ_P0096730 Vbp1 protein_coding protein_coding MGP_BALBcJ_T0096731.1 MGP_BALBcJ_G0035830.1 mouse_genomes_project X 70585089 70592528 + Vbp1 protein_coding retained_intron MGP_BALBcJ_T0011173.1 MGP_BALBcJ_G0009298.1 mouse_genomes_project X 98956996 98957091 - Mir374b miRNA miRNA MGP_BALBcJ_T0016218.1 MGP_BALBcJ_G0014315.1 mouse_genomes_project X 18142705 18143155 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100269.1 MGP_BALBcJ_G0038305.1 mouse_genomes_project X 88043035 88043140 + Gm25332 snRNA snRNA MGP_BALBcJ_T0100235.1 MGP_BALBcJ_G0038271.1 mouse_genomes_project X 9109272 9109463 - Gm25202 snRNA snRNA MGP_BALBcJ_T0095880.1 MGP_BALBcJ_G0035602.1 mouse_genomes_project X 31861598 31885558 + MGP_BALBcJ_P0095880 Nkap protein_coding protein_coding MGP_BALBcJ_T0095881.1 MGP_BALBcJ_G0035602.1 mouse_genomes_project X 31871131 31876584 + Nkap protein_coding retained_intron MGP_BALBcJ_T0018647.1 MGP_BALBcJ_G0015735.1 mouse_genomes_project X 148211075 148251382 + 9530051G07Rik processed_transcript processed_transcript MGP_BALBcJ_T0102893.1 MGP_BALBcJ_G0040708.1 mouse_genomes_project X 154357402 154371146 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102880.1 MGP_BALBcJ_G0040695.1 mouse_genomes_project X 101753416 101758901 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097137.1 MGP_BALBcJ_G0035951.1 mouse_genomes_project X 98538647 98541112 - MGP_BALBcJ_P0097137 Nap1l2 protein_coding protein_coding MGP_BALBcJ_T0100240.1 MGP_BALBcJ_G0038276.1 mouse_genomes_project X 15338919 15339092 - Gm23628 snRNA snRNA MGP_BALBcJ_T0016825.1 MGP_BALBcJ_G0014922.1 mouse_genomes_project X 155302209 155302706 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100238.1 MGP_BALBcJ_G0038274.1 mouse_genomes_project X 14055914 14056021 + Gm22783 snRNA snRNA MGP_BALBcJ_T0097555.1 MGP_BALBcJ_G0036093.1 mouse_genomes_project X 134922484 134994132 + MGP_BALBcJ_P0097555 Tbc1d8b protein_coding protein_coding MGP_BALBcJ_T0097558.1 MGP_BALBcJ_G0036093.1 mouse_genomes_project X 134976898 134985970 + Tbc1d8b protein_coding processed_transcript MGP_BALBcJ_T0016818.1 MGP_BALBcJ_G0014915.1 mouse_genomes_project X 154095640 154096525 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016158.1 MGP_BALBcJ_G0014255.1 mouse_genomes_project X 3674807 3675739 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097559.1 MGP_BALBcJ_G0036095.1 mouse_genomes_project X 135020799 135023598 - MGP_BALBcJ_P0097559 Ripply1 protein_coding protein_coding MGP_BALBcJ_T0095660.1 MGP_BALBcJ_G0035533.1 mouse_genomes_project X 5012090 5082714 + MGP_BALBcJ_P0095660 Otc protein_coding protein_coding MGP_BALBcJ_T0095661.1 MGP_BALBcJ_G0035533.1 mouse_genomes_project X 5012152 5077088 + MGP_BALBcJ_P0095661 Otc protein_coding protein_coding MGP_BALBcJ_T0097706.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145656296 145725339 - MGP_BALBcJ_P0097706 Apex2 protein_coding protein_coding MGP_BALBcJ_T0097707.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145657129 145723577 - MGP_BALBcJ_P0097707 Apex2 protein_coding protein_coding MGP_BALBcJ_T0097712.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145703606 145725339 - MGP_BALBcJ_P0097712 Apex2 protein_coding protein_coding MGP_BALBcJ_T0097713.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145706251 145723580 - Apex2 protein_coding retained_intron MGP_BALBcJ_T0097714.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145706252 145725363 - Apex2 protein_coding processed_transcript MGP_BALBcJ_T0097715.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145706252 145723644 - MGP_BALBcJ_P0097715 Apex2 protein_coding protein_coding MGP_BALBcJ_T0097716.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145706252 145723591 - MGP_BALBcJ_P0097716 Apex2 protein_coding protein_coding MGP_BALBcJ_T0097717.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145707203 145721065 - Apex2 protein_coding processed_transcript MGP_BALBcJ_T0097718.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145707293 145723566 - MGP_BALBcJ_P0097718 Apex2 protein_coding protein_coding MGP_BALBcJ_T0097719.1 MGP_BALBcJ_G0036135.1 mouse_genomes_project X 145718989 145723576 - MGP_BALBcJ_P0097719 Apex2 protein_coding protein_coding MGP_BALBcJ_T0096756.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73511573 73645512 - MGP_BALBcJ_P0096756 Prrg1 protein_coding protein_coding MGP_BALBcJ_T0096757.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73511573 73645621 - MGP_BALBcJ_P0096757 Prrg1 protein_coding protein_coding MGP_BALBcJ_T0096758.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73511573 73645626 - MGP_BALBcJ_P0096758 Prrg1 protein_coding protein_coding MGP_BALBcJ_T0096759.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73531606 73645585 - Prrg1 protein_coding processed_transcript MGP_BALBcJ_T0096760.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73542871 73645512 - Prrg1 protein_coding retained_intron MGP_BALBcJ_T0096761.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73542888 73645626 - Prrg1 protein_coding retained_intron MGP_BALBcJ_T0096762.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73545964 73645624 - MGP_BALBcJ_P0096762 Prrg1 protein_coding protein_coding MGP_BALBcJ_T0096763.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73578104 73645621 - Prrg1 protein_coding retained_intron MGP_BALBcJ_T0096764.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73581137 73645620 - Prrg1 protein_coding retained_intron MGP_BALBcJ_T0096765.1 MGP_BALBcJ_G0035845.1 mouse_genomes_project X 73581603 73645582 - Prrg1 protein_coding processed_transcript MGP_BALBcJ_T0095649.1 MGP_BALBcJ_G0035531.1 mouse_genomes_project X 4795437 4875925 - MGP_BALBcJ_P0095649 Srpx protein_coding protein_coding MGP_BALBcJ_T0095650.1 MGP_BALBcJ_G0035531.1 mouse_genomes_project X 4796016 4875952 - MGP_BALBcJ_P0095650 Srpx protein_coding protein_coding MGP_BALBcJ_T0095651.1 MGP_BALBcJ_G0035531.1 mouse_genomes_project X 4796367 4875848 - MGP_BALBcJ_P0095651 Srpx protein_coding protein_coding MGP_BALBcJ_T0095652.1 MGP_BALBcJ_G0035531.1 mouse_genomes_project X 4830776 4875919 - Srpx protein_coding processed_transcript MGP_BALBcJ_T0096122.1 MGP_BALBcJ_G0035685.1 mouse_genomes_project X 46879886 47220742 - MGP_BALBcJ_P0096122 Gpc3 protein_coding protein_coding MGP_BALBcJ_T0096123.1 MGP_BALBcJ_G0035685.1 mouse_genomes_project X 46990703 47220771 - MGP_BALBcJ_P0096123 Gpc3 protein_coding protein_coding MGP_BALBcJ_T0016208.1 MGP_BALBcJ_G0014305.1 mouse_genomes_project X 15590323 15590693 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100243.1 MGP_BALBcJ_G0038279.1 mouse_genomes_project X 17592175 17592285 + Gm26131 snRNA snRNA MGP_BALBcJ_T0096979.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95852861 95865740 + MGP_BALBcJ_P0096979 Arr3 protein_coding unknown_likely_coding MGP_BALBcJ_T0096980.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95852866 95865846 + MGP_BALBcJ_P0096980 Arr3 protein_coding protein_coding MGP_BALBcJ_T0096981.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95852892 95860982 + Arr3 protein_coding retained_intron MGP_BALBcJ_T0096982.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95852913 95860422 + Arr3 protein_coding retained_intron MGP_BALBcJ_T0096983.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95852924 95861190 + Arr3 protein_coding retained_intron MGP_BALBcJ_T0096984.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95852931 95865846 + Arr3 protein_coding retained_intron MGP_BALBcJ_T0096985.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95853016 95859292 + MGP_BALBcJ_P0096985 Arr3 protein_coding protein_coding MGP_BALBcJ_T0096986.1 MGP_BALBcJ_G0035913.1 mouse_genomes_project X 95859186 95861789 + Arr3 protein_coding retained_intron MGP_BALBcJ_T0101513.1 MGP_BALBcJ_G0039549.1 mouse_genomes_project X 1819791 1819867 + Gm26401 snoRNA snoRNA MGP_BALBcJ_T0095982.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36771393 36784740 + Xiap protein_coding processed_transcript MGP_BALBcJ_T0095983.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36779557 36822252 + MGP_BALBcJ_P0095983 Xiap protein_coding protein_coding MGP_BALBcJ_T0095984.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36779639 36816861 + Xiap protein_coding processed_transcript MGP_BALBcJ_T0095985.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36780372 36822252 + MGP_BALBcJ_P0095985 Xiap protein_coding protein_coding MGP_BALBcJ_T0095986.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36780384 36784740 + Xiap protein_coding processed_transcript MGP_BALBcJ_T0095987.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36780729 36822252 + Xiap protein_coding processed_transcript MGP_BALBcJ_T0095988.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36783427 36822252 + MGP_BALBcJ_P0095988 Xiap protein_coding protein_coding MGP_BALBcJ_T0095989.1 MGP_BALBcJ_G0035643.1 mouse_genomes_project X 36805756 36822252 + MGP_BALBcJ_P0095989 Xiap protein_coding protein_coding MGP_BALBcJ_T0016613.1 MGP_BALBcJ_G0014710.1 mouse_genomes_project X 110061985 110062491 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097129.1 MGP_BALBcJ_G0035948.1 mouse_genomes_project X 98189575 98196554 - MGP_BALBcJ_P0097129 protein_coding protein_coding MGP_BALBcJ_T0097130.1 MGP_BALBcJ_G0035948.1 mouse_genomes_project X 98189575 98195294 - MGP_BALBcJ_P0097130 protein_coding protein_coding MGP_BALBcJ_T0097131.1 MGP_BALBcJ_G0035948.1 mouse_genomes_project X 98192256 98196076 - MGP_BALBcJ_P0097131 protein_coding protein_coding MGP_BALBcJ_T0098690.1 MGP_BALBcJ_G0036744.1 mouse_genomes_project X 63915344 63915465 - n-R5s7 rRNA rRNA MGP_BALBcJ_T0098727.1 MGP_BALBcJ_G0036781.1 mouse_genomes_project X 77085428 77085647 + Gm26174 ribozyme ribozyme MGP_BALBcJ_T0016230.1 MGP_BALBcJ_G0014327.1 mouse_genomes_project X 33486133 33486427 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096121.1 MGP_BALBcJ_G0035684.1 mouse_genomes_project X 46658038 46770459 - MGP_BALBcJ_P0096121 Gpc4 protein_coding protein_coding MGP_BALBcJ_T0011751.1 MGP_BALBcJ_G0009876.1 mouse_genomes_project X 104510205 104510497 - Gm26415 misc_RNA misc_RNA MGP_BALBcJ_T0011194.1 MGP_BALBcJ_G0009319.1 mouse_genomes_project X 142120292 142120379 + Mir1912 miRNA miRNA MGP_BALBcJ_T0016396.1 MGP_BALBcJ_G0014493.1 mouse_genomes_project X 71756835 71757550 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005570.1 MGP_BALBcJ_G0004696.1 mouse_genomes_project X 70646441 70648258 + Gm15063 antisense antisense MGP_BALBcJ_T0016223.1 MGP_BALBcJ_G0014320.1 mouse_genomes_project X 31037493 31037989 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095874.1 MGP_BALBcJ_G0035600.1 mouse_genomes_project X 31817493 31820376 - MGP_BALBcJ_P0095874 Rpl39 protein_coding protein_coding MGP_BALBcJ_T0095875.1 MGP_BALBcJ_G0035600.1 mouse_genomes_project X 31818616 31820140 - Rpl39 protein_coding retained_intron MGP_BALBcJ_T0095876.1 MGP_BALBcJ_G0035600.1 mouse_genomes_project X 31819510 31820130 - Rpl39 protein_coding retained_intron MGP_BALBcJ_T0016225.1 MGP_BALBcJ_G0014322.1 mouse_genomes_project X 31401844 31402641 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009357.1 MGP_BALBcJ_G0007511.1 mouse_genomes_project X 47678600 47680022 - Gm28730 lincRNA lincRNA MGP_BALBcJ_T0009358.1 MGP_BALBcJ_G0007511.1 mouse_genomes_project X 47678608 47680006 - Gm28730 lincRNA lincRNA MGP_BALBcJ_T0009359.1 MGP_BALBcJ_G0007511.1 mouse_genomes_project X 47678713 47680566 - Gm28730 lincRNA lincRNA MGP_BALBcJ_T0096532.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69229862 69252898 - MGP_BALBcJ_P0096532 Flna protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096533.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69229862 69256319 - MGP_BALBcJ_P0096533 Flna protein_coding protein_coding MGP_BALBcJ_T0096534.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69229864 69253034 - MGP_BALBcJ_P0096534 Flna protein_coding protein_coding MGP_BALBcJ_T0096535.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69229942 69253055 - MGP_BALBcJ_P0096535 Flna protein_coding protein_coding MGP_BALBcJ_T0096536.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69230190 69252864 - MGP_BALBcJ_P0096536 Flna protein_coding protein_coding MGP_BALBcJ_T0096537.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69231211 69232881 - Flna protein_coding processed_transcript MGP_BALBcJ_T0096538.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69231235 69233191 - Flna protein_coding retained_intron MGP_BALBcJ_T0096539.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69232849 69234022 - Flna protein_coding retained_intron MGP_BALBcJ_T0096540.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69233273 69234891 - MGP_BALBcJ_P0096540 Flna protein_coding protein_coding MGP_BALBcJ_T0096541.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69233638 69234370 - Flna protein_coding retained_intron MGP_BALBcJ_T0096542.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69234253 69235465 - MGP_BALBcJ_P0096542 Flna protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096543.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69234487 69235201 - Flna protein_coding retained_intron MGP_BALBcJ_T0096544.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69234781 69236972 - MGP_BALBcJ_P0096544 Flna protein_coding protein_coding MGP_BALBcJ_T0096545.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69237097 69242365 - Flna protein_coding processed_transcript MGP_BALBcJ_T0096546.1 MGP_BALBcJ_G0035800.1 mouse_genomes_project X 69242483 69244416 - Flna protein_coding processed_transcript MGP_BALBcJ_T0097708.1 MGP_BALBcJ_G0036136.1 mouse_genomes_project X 145681991 145705383 + MGP_BALBcJ_P0097708 Alas2 protein_coding protein_coding MGP_BALBcJ_T0097709.1 MGP_BALBcJ_G0036136.1 mouse_genomes_project X 145682075 145705367 + MGP_BALBcJ_P0097709 Alas2 protein_coding protein_coding MGP_BALBcJ_T0097710.1 MGP_BALBcJ_G0036136.1 mouse_genomes_project X 145688653 145692280 + Alas2 protein_coding retained_intron MGP_BALBcJ_T0097711.1 MGP_BALBcJ_G0036136.1 mouse_genomes_project X 145701134 145705367 + Alas2 protein_coding processed_transcript MGP_BALBcJ_T0096427.1 MGP_BALBcJ_G0035788.1 mouse_genomes_project X 68796969 68829062 - MGP_BALBcJ_P0096427 Pdzd4 protein_coding protein_coding MGP_BALBcJ_T0096428.1 MGP_BALBcJ_G0035788.1 mouse_genomes_project X 68796969 68829062 - MGP_BALBcJ_P0096428 Pdzd4 protein_coding protein_coding MGP_BALBcJ_T0097535.1 MGP_BALBcJ_G0036086.1 mouse_genomes_project X 134301440 134307401 - MGP_BALBcJ_P0097535 Serpina7 protein_coding protein_coding MGP_BALBcJ_T0097536.1 MGP_BALBcJ_G0036086.1 mouse_genomes_project X 134301440 134307399 - MGP_BALBcJ_P0097536 Serpina7 protein_coding protein_coding MGP_BALBcJ_T0097537.1 MGP_BALBcJ_G0036086.1 mouse_genomes_project X 134305669 134307420 - MGP_BALBcJ_P0097537 Serpina7 protein_coding protein_coding MGP_BALBcJ_T0016427.1 MGP_BALBcJ_G0014524.1 mouse_genomes_project X 77638248 77639217 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016373.1 MGP_BALBcJ_G0014470.1 mouse_genomes_project X 65926691 65927322 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095919.1 MGP_BALBcJ_G0035625.1 mouse_genomes_project X 32708221 32718085 - Btg1-ps1 protein_coding unprocessed_pseudogene MGP_BALBcJ_T0095921.1 MGP_BALBcJ_G0035625.1 mouse_genomes_project X 32708956 32718085 - MGP_BALBcJ_P0095921 Btg1-ps1 protein_coding protein_coding MGP_BALBcJ_T0011118.1 MGP_BALBcJ_G0009243.1 mouse_genomes_project X 47348631 47348715 - Mir19b-2 miRNA miRNA MGP_BALBcJ_T0016726.1 MGP_BALBcJ_G0014823.1 mouse_genomes_project X 137002589 137003591 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016664.1 MGP_BALBcJ_G0014761.1 mouse_genomes_project X 125493331 125494981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016642.1 MGP_BALBcJ_G0014739.1 mouse_genomes_project X 115414685 115415337 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096256.1 MGP_BALBcJ_G0035741.1 mouse_genomes_project X 63583382 63584915 + MGP_BALBcJ_P0096256 protein_coding protein_coding MGP_BALBcJ_T0016463.1 MGP_BALBcJ_G0014560.1 mouse_genomes_project X 86619012 86620047 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097614.1 MGP_BALBcJ_G0036111.1 mouse_genomes_project X 136623763 136831237 + MGP_BALBcJ_P0097614 Col4a5 protein_coding protein_coding MGP_BALBcJ_T0097615.1 MGP_BALBcJ_G0036111.1 mouse_genomes_project X 136623788 136831183 + MGP_BALBcJ_P0097615 Col4a5 protein_coding protein_coding MGP_BALBcJ_T0097616.1 MGP_BALBcJ_G0036111.1 mouse_genomes_project X 136770216 136831237 + MGP_BALBcJ_P0097616 Col4a5 protein_coding protein_coding MGP_BALBcJ_T0097617.1 MGP_BALBcJ_G0036111.1 mouse_genomes_project X 136798568 136816426 + Col4a5 protein_coding processed_transcript MGP_BALBcJ_T0097250.1 MGP_BALBcJ_G0035988.1 mouse_genomes_project X 103366003 103368705 - MGP_BALBcJ_P0097250 Gm732 protein_coding protein_coding MGP_BALBcJ_T0097251.1 MGP_BALBcJ_G0035988.1 mouse_genomes_project X 103367144 103368734 - MGP_BALBcJ_P0097251 Gm732 protein_coding protein_coding MGP_BALBcJ_T0097225.1 MGP_BALBcJ_G0035982.1 mouse_genomes_project X 102567825 102592672 + MGP_BALBcJ_P0097225 A630033H20Rik protein_coding protein_coding MGP_BALBcJ_T0097226.1 MGP_BALBcJ_G0035982.1 mouse_genomes_project X 102567825 102590412 + MGP_BALBcJ_P0097226 A630033H20Rik protein_coding protein_coding MGP_BALBcJ_T0097227.1 MGP_BALBcJ_G0035982.1 mouse_genomes_project X 102568352 102590438 + MGP_BALBcJ_P0097227 A630033H20Rik protein_coding protein_coding MGP_BALBcJ_T0097228.1 MGP_BALBcJ_G0035982.1 mouse_genomes_project X 102568352 102592672 + MGP_BALBcJ_P0097228 A630033H20Rik protein_coding protein_coding MGP_BALBcJ_T0097229.1 MGP_BALBcJ_G0035982.1 mouse_genomes_project X 102568496 102590158 + MGP_BALBcJ_P0097229 A630033H20Rik protein_coding protein_coding MGP_BALBcJ_T0097230.1 MGP_BALBcJ_G0035982.1 mouse_genomes_project X 102568513 102592668 + MGP_BALBcJ_P0097230 A630033H20Rik protein_coding protein_coding MGP_BALBcJ_T0102849.1 MGP_BALBcJ_G0040664.1 mouse_genomes_project X 32457276 32457773 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0096303.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66332295 66356275 + MGP_BALBcJ_P0096303 Mtmr1 protein_coding protein_coding MGP_BALBcJ_T0096304.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66332295 66386858 + MGP_BALBcJ_P0096304 Mtmr1 protein_coding protein_coding MGP_BALBcJ_T0096305.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66332472 66361730 + MGP_BALBcJ_P0096305 Mtmr1 protein_coding protein_coding MGP_BALBcJ_T0096306.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66337351 66356253 + MGP_BALBcJ_P0096306 Mtmr1 protein_coding protein_coding MGP_BALBcJ_T0096307.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66337351 66356253 + MGP_BALBcJ_P0096307 Mtmr1 protein_coding protein_coding MGP_BALBcJ_T0096308.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66337351 66356253 + MGP_BALBcJ_P0096308 Mtmr1 protein_coding protein_coding MGP_BALBcJ_T0096309.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66358695 66360043 + Mtmr1 protein_coding retained_intron MGP_BALBcJ_T0096310.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66359196 66360360 + Mtmr1 protein_coding retained_intron MGP_BALBcJ_T0096311.1 MGP_BALBcJ_G0035752.1 mouse_genomes_project X 66361423 66386325 + Mtmr1 protein_coding retained_intron MGP_BALBcJ_T0097280.1 MGP_BALBcJ_G0035999.1 mouse_genomes_project X 106816448 106817092 + MGP_BALBcJ_P0097280 protein_coding protein_coding MGP_BALBcJ_T0016737.1 MGP_BALBcJ_G0014834.1 mouse_genomes_project X 137546696 137546909 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016330.1 MGP_BALBcJ_G0014427.1 mouse_genomes_project X 56722493 56723145 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016580.1 MGP_BALBcJ_G0014677.1 mouse_genomes_project X 103785318 103786355 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016398.1 MGP_BALBcJ_G0014495.1 mouse_genomes_project X 71984372 71984627 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011160.1 MGP_BALBcJ_G0009285.1 mouse_genomes_project X 69027937 69028025 - Mir718 miRNA miRNA MGP_BALBcJ_T0016411.1 MGP_BALBcJ_G0014508.1 mouse_genomes_project X 73744080 73745064 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100237.1 MGP_BALBcJ_G0038273.1 mouse_genomes_project X 12093953 12094057 + Gm22294 snRNA snRNA MGP_BALBcJ_T0016431.1 MGP_BALBcJ_G0014528.1 mouse_genomes_project X 80160873 80161988 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095536.1 MGP_BALBcJ_G0035499.1 mouse_genomes_project X 2429398 2449881 + MGP_BALBcJ_P0095536 Kcnd1 protein_coding protein_coding MGP_BALBcJ_T0095537.1 MGP_BALBcJ_G0035499.1 mouse_genomes_project X 2429416 2430377 + Kcnd1 protein_coding processed_transcript MGP_BALBcJ_T0097337.1 MGP_BALBcJ_G0036024.1 mouse_genomes_project X 122340501 122342107 + MGP_BALBcJ_P0097337 4921511C20Rik protein_coding protein_coding MGP_BALBcJ_T0096050.1 MGP_BALBcJ_G0035661.1 mouse_genomes_project X 43073310 43124942 - MGP_BALBcJ_P0096050 Elf4 protein_coding protein_coding MGP_BALBcJ_T0096051.1 MGP_BALBcJ_G0035661.1 mouse_genomes_project X 43073313 43133908 - MGP_BALBcJ_P0096051 Elf4 protein_coding protein_coding MGP_BALBcJ_T0096052.1 MGP_BALBcJ_G0035661.1 mouse_genomes_project X 43078916 43133908 - MGP_BALBcJ_P0096052 Elf4 protein_coding protein_coding MGP_BALBcJ_T0016287.1 MGP_BALBcJ_G0014384.1 mouse_genomes_project X 46460749 46461282 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095798.1 MGP_BALBcJ_G0035572.1 mouse_genomes_project X 15693735 15714005 - Uxt protein_coding processed_transcript MGP_BALBcJ_T0095799.1 MGP_BALBcJ_G0035572.1 mouse_genomes_project X 15703675 15714031 - MGP_BALBcJ_P0095799 Uxt protein_coding protein_coding MGP_BALBcJ_T0095800.1 MGP_BALBcJ_G0035572.1 mouse_genomes_project X 15703936 15713929 - Uxt protein_coding retained_intron MGP_BALBcJ_T0095801.1 MGP_BALBcJ_G0035572.1 mouse_genomes_project X 15703942 15714014 - Uxt protein_coding processed_transcript MGP_BALBcJ_T0095802.1 MGP_BALBcJ_G0035572.1 mouse_genomes_project X 15711075 15714000 - Uxt protein_coding retained_intron MGP_BALBcJ_T0095803.1 MGP_BALBcJ_G0035572.1 mouse_genomes_project X 15713430 15713988 - Uxt protein_coding processed_transcript MGP_BALBcJ_T0016205.1 MGP_BALBcJ_G0014302.1 mouse_genomes_project X 15119913 15120706 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097335.1 MGP_BALBcJ_G0036022.1 mouse_genomes_project X 121788085 121791489 - MGP_BALBcJ_P0097335 4932411N23Rik protein_coding protein_coding MGP_BALBcJ_T0016841.1 MGP_BALBcJ_G0014938.1 mouse_genomes_project X 158513270 158513736 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095851.1 MGP_BALBcJ_G0035591.1 mouse_genomes_project X 31327423 31335972 + MGP_BALBcJ_P0095851 Pgrmc1 protein_coding protein_coding MGP_BALBcJ_T0009409.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147439345 147466353 - Kantr lincRNA lincRNA MGP_BALBcJ_T0009410.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147439497 147466353 - Kantr lincRNA lincRNA MGP_BALBcJ_T0009411.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147439497 147466353 - Kantr lincRNA lincRNA MGP_BALBcJ_T0009412.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147439574 147466321 - Kantr lincRNA lincRNA MGP_BALBcJ_T0009413.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147453791 147456882 - Kantr lincRNA lincRNA MGP_BALBcJ_T0009414.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147453887 147466328 - Kantr lincRNA lincRNA MGP_BALBcJ_T0009415.1 MGP_BALBcJ_G0007544.1 mouse_genomes_project X 147458667 147466328 - Kantr lincRNA lincRNA MGP_BALBcJ_T0096893.1 MGP_BALBcJ_G0035888.1 mouse_genomes_project X 90767717 90775479 - MGP_BALBcJ_P0096893 Asb12 protein_coding protein_coding MGP_BALBcJ_T0098699.1 MGP_BALBcJ_G0036753.1 mouse_genomes_project X 147118711 147118818 + n-R5s14 rRNA rRNA MGP_BALBcJ_T0016359.1 MGP_BALBcJ_G0014456.1 mouse_genomes_project X 63289612 63290225 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005572.1 MGP_BALBcJ_G0004698.1 mouse_genomes_project X 80655110 80663102 + Gm14764 antisense antisense MGP_BALBcJ_T0011095.1 MGP_BALBcJ_G0009220.1 mouse_genomes_project X 1837819 1837887 - Mir188 miRNA miRNA MGP_BALBcJ_T0096530.1 MGP_BALBcJ_G0035799.1 mouse_genomes_project X 69183296 69214517 + MGP_BALBcJ_P0096530 Tktl1 protein_coding protein_coding MGP_BALBcJ_T0096531.1 MGP_BALBcJ_G0035799.1 mouse_genomes_project X 69183327 69202468 + MGP_BALBcJ_P0096531 Tktl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095877.1 MGP_BALBcJ_G0035601.1 mouse_genomes_project X 31826633 31845157 - MGP_BALBcJ_P0095877 Upf3b protein_coding protein_coding MGP_BALBcJ_T0095878.1 MGP_BALBcJ_G0035601.1 mouse_genomes_project X 31830631 31839406 - MGP_BALBcJ_P0095878 Upf3b protein_coding protein_coding MGP_BALBcJ_T0095879.1 MGP_BALBcJ_G0035601.1 mouse_genomes_project X 31832405 31845157 - Upf3b protein_coding processed_transcript MGP_BALBcJ_T0016497.1 MGP_BALBcJ_G0014594.1 mouse_genomes_project X 91643945 91648698 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016578.1 MGP_BALBcJ_G0014675.1 mouse_genomes_project X 102830707 102831022 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097079.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96903835 96948420 + MGP_BALBcJ_P0097079 Ogt protein_coding protein_coding MGP_BALBcJ_T0097080.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96903837 96916476 + Ogt protein_coding retained_intron MGP_BALBcJ_T0097081.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96903839 96949831 + MGP_BALBcJ_P0097081 Ogt protein_coding protein_coding MGP_BALBcJ_T0097082.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96903869 96917917 + Ogt protein_coding processed_transcript MGP_BALBcJ_T0097083.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96903883 96918185 + Ogt protein_coding retained_intron MGP_BALBcJ_T0097084.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96903915 96916493 + Ogt protein_coding retained_intron MGP_BALBcJ_T0097085.1 MGP_BALBcJ_G0035932.1 mouse_genomes_project X 96918943 96948638 + Ogt protein_coding processed_transcript MGP_BALBcJ_T0016390.1 MGP_BALBcJ_G0014487.1 mouse_genomes_project X 70519568 70520216 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095890.1 MGP_BALBcJ_G0035611.1 mouse_genomes_project X 32156234 32161360 + MGP_BALBcJ_P0095890 Rhox2b protein_coding protein_coding MGP_BALBcJ_T0095725.1 MGP_BALBcJ_G0035553.1 mouse_genomes_project X 12322739 12336605 - Fundc1 protein_coding processed_transcript MGP_BALBcJ_T0095726.1 MGP_BALBcJ_G0035553.1 mouse_genomes_project X 12322739 12337234 - MGP_BALBcJ_P0095726 Fundc1 protein_coding protein_coding MGP_BALBcJ_T0095727.1 MGP_BALBcJ_G0035553.1 mouse_genomes_project X 12322775 12337283 - MGP_BALBcJ_P0095727 Fundc1 protein_coding protein_coding MGP_BALBcJ_T0016849.1 MGP_BALBcJ_G0014946.1 mouse_genomes_project X 161283091 161283479 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016483.1 MGP_BALBcJ_G0014580.1 mouse_genomes_project X 89782951 89783360 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016750.1 MGP_BALBcJ_G0014847.1 mouse_genomes_project X 139674840 139675971 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016623.1 MGP_BALBcJ_G0014720.1 mouse_genomes_project X 111940451 111940839 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016565.1 MGP_BALBcJ_G0014662.1 mouse_genomes_project X 101572952 101573565 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097258.1 MGP_BALBcJ_G0035991.1 mouse_genomes_project X 104397407 104406171 - MGP_BALBcJ_P0097258 Hmgn5 protein_coding protein_coding MGP_BALBcJ_T0016747.1 MGP_BALBcJ_G0014844.1 mouse_genomes_project X 139393619 139396227 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098704.1 MGP_BALBcJ_G0036758.1 mouse_genomes_project X 157488235 157488363 + Gm27490 rRNA rRNA MGP_BALBcJ_T0016741.1 MGP_BALBcJ_G0014838.1 mouse_genomes_project X 137911278 137911741 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095891.1 MGP_BALBcJ_G0035612.1 mouse_genomes_project X 32156250 32161360 + MGP_BALBcJ_P0095891 Rhox2h protein_coding protein_coding MGP_BALBcJ_T0016364.1 MGP_BALBcJ_G0014461.1 mouse_genomes_project X 63752959 63753187 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095436.1 MGP_BALBcJ_G0035480.1 mouse_genomes_project X 1412552 1533981 + MGP_BALBcJ_P0095436 Dgkk protein_coding protein_coding MGP_BALBcJ_T0097848.1 MGP_BALBcJ_G0036159.1 mouse_genomes_project X 148299785 148313841 + MGP_BALBcJ_P0097848 Foxr2 protein_coding protein_coding MGP_BALBcJ_T0097849.1 MGP_BALBcJ_G0036159.1 mouse_genomes_project X 148307892 148313841 + MGP_BALBcJ_P0097849 Foxr2 protein_coding protein_coding MGP_BALBcJ_T0009378.1 MGP_BALBcJ_G0007527.1 mouse_genomes_project X 98838173 98844859 - Xist lincRNA lincRNA MGP_BALBcJ_T0009379.1 MGP_BALBcJ_G0007527.1 mouse_genomes_project X 98838697 98860947 - Xist lincRNA lincRNA MGP_BALBcJ_T0009380.1 MGP_BALBcJ_G0007527.1 mouse_genomes_project X 98847005 98847957 - Xist lincRNA lincRNA MGP_BALBcJ_T0097727.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145772353 145784552 - MGP_BALBcJ_P0097727 protein_coding unknown_likely_coding MGP_BALBcJ_T0097728.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145772914 145784487 - MGP_BALBcJ_P0097728 protein_coding protein_coding MGP_BALBcJ_T0097729.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145772914 145784524 - MGP_BALBcJ_P0097729 protein_coding protein_coding MGP_BALBcJ_T0097730.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145772914 145784487 - MGP_BALBcJ_P0097730 protein_coding protein_coding MGP_BALBcJ_T0097731.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145773032 145783244 - MGP_BALBcJ_P0097731 protein_coding protein_coding MGP_BALBcJ_T0097732.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145776648 145779008 - protein_coding retained_intron MGP_BALBcJ_T0097733.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145776801 145784487 - MGP_BALBcJ_P0097733 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097734.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145776925 145779057 - protein_coding retained_intron MGP_BALBcJ_T0097735.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145778641 145780184 - protein_coding retained_intron MGP_BALBcJ_T0097736.1 MGP_BALBcJ_G0036138.1 mouse_genomes_project X 145780722 145784460 - MGP_BALBcJ_P0097736 protein_coding protein_coding MGP_BALBcJ_T0005581.1 MGP_BALBcJ_G0004706.1 mouse_genomes_project X 136866967 136868293 + Gm15295 antisense antisense MGP_BALBcJ_T0100236.1 MGP_BALBcJ_G0038272.1 mouse_genomes_project X 10465388 10465495 - Gm25207 snRNA snRNA MGP_BALBcJ_T0011746.1 MGP_BALBcJ_G0009871.1 mouse_genomes_project X 98871172 98871295 + Gm27875 misc_RNA misc_RNA MGP_BALBcJ_T0097770.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146659653 146755714 + MGP_BALBcJ_P0097770 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097771.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146659653 146707832 + MGP_BALBcJ_P0097771 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097772.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146660052 146763970 + MGP_BALBcJ_P0097772 Phf8 protein_coding unknown_likely_coding MGP_BALBcJ_T0097773.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146660150 146729444 + MGP_BALBcJ_P0097773 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097774.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146660162 146755714 + MGP_BALBcJ_P0097774 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097775.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146660168 146720389 + MGP_BALBcJ_P0097775 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097776.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146661341 146688113 + MGP_BALBcJ_P0097776 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097777.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146691380 146693604 + Phf8 protein_coding retained_intron MGP_BALBcJ_T0097778.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146703061 146712860 + MGP_BALBcJ_P0097778 Phf8 protein_coding protein_coding MGP_BALBcJ_T0097779.1 MGP_BALBcJ_G0036145.1 mouse_genomes_project X 146759923 146763966 + Phf8 protein_coding retained_intron MGP_BALBcJ_T0097847.1 MGP_BALBcJ_G0036158.1 mouse_genomes_project X 148209612 148211022 - MGP_BALBcJ_P0097847 Mageh1 protein_coding protein_coding MGP_BALBcJ_T0095642.1 MGP_BALBcJ_G0035527.1 mouse_genomes_project X 4425948 4429570 - protein_coding processed_transcript MGP_BALBcJ_T0095643.1 MGP_BALBcJ_G0035527.1 mouse_genomes_project X 4426215 4432943 - protein_coding processed_transcript MGP_BALBcJ_T0095644.1 MGP_BALBcJ_G0035527.1 mouse_genomes_project X 4426277 4427297 - protein_coding processed_transcript MGP_BALBcJ_T0016296.1 MGP_BALBcJ_G0014393.1 mouse_genomes_project X 48414599 48414893 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096272.1 MGP_BALBcJ_G0035744.1 mouse_genomes_project X 64320040 64818061 + MGP_BALBcJ_P0096272 Aff2 protein_coding protein_coding MGP_BALBcJ_T0096273.1 MGP_BALBcJ_G0035744.1 mouse_genomes_project X 64320251 64503484 + Aff2 protein_coding processed_transcript MGP_BALBcJ_T0096274.1 MGP_BALBcJ_G0035744.1 mouse_genomes_project X 64320446 64734828 + Aff2 protein_coding processed_transcript MGP_BALBcJ_T0096275.1 MGP_BALBcJ_G0035744.1 mouse_genomes_project X 64320538 64822019 + MGP_BALBcJ_P0096275 Aff2 protein_coding unknown_likely_coding MGP_BALBcJ_T0096276.1 MGP_BALBcJ_G0035744.1 mouse_genomes_project X 64806701 64816800 + Aff2 protein_coding retained_intron MGP_BALBcJ_T0005560.1 MGP_BALBcJ_G0004687.1 mouse_genomes_project X 51323228 51327141 - Gm2155 antisense antisense MGP_BALBcJ_T0011148.1 MGP_BALBcJ_G0009273.1 mouse_genomes_project X 61863644 61863726 - Mir465b-2 miRNA miRNA MGP_BALBcJ_T0011102.1 MGP_BALBcJ_G0009227.1 mouse_genomes_project X 13844658 13844737 - Mir222 miRNA miRNA MGP_BALBcJ_T0016289.1 MGP_BALBcJ_G0014386.1 mouse_genomes_project X 47492131 47492622 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098688.1 MGP_BALBcJ_G0036742.1 mouse_genomes_project X 16475173 16475252 + Gm25553 rRNA rRNA MGP_BALBcJ_T0096075.1 MGP_BALBcJ_G0035667.1 mouse_genomes_project X 43366542 43378665 + MGP_BALBcJ_P0096075 Rbmx2 protein_coding unknown_likely_coding MGP_BALBcJ_T0096076.1 MGP_BALBcJ_G0035667.1 mouse_genomes_project X 43372693 43377662 + Rbmx2 protein_coding processed_transcript MGP_BALBcJ_T0096876.1 MGP_BALBcJ_G0035885.1 mouse_genomes_project X 90314185 90318723 - MGP_BALBcJ_P0096876 Spin4 protein_coding protein_coding MGP_BALBcJ_T0011116.1 MGP_BALBcJ_G0009241.1 mouse_genomes_project X 47348341 47348416 - Mir363 miRNA miRNA MGP_BALBcJ_T0101550.1 MGP_BALBcJ_G0039586.1 mouse_genomes_project X 127526255 127526379 + Gm26406 snoRNA snoRNA MGP_BALBcJ_T0016544.1 MGP_BALBcJ_G0014641.1 mouse_genomes_project X 98893549 98893978 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100301.1 MGP_BALBcJ_G0038337.1 mouse_genomes_project X 149951163 149951271 + Gm22359 snRNA snRNA MGP_BALBcJ_T0100288.1 MGP_BALBcJ_G0038324.1 mouse_genomes_project X 122868364 122868471 - Gm25061 snRNA snRNA MGP_BALBcJ_T0096361.1 MGP_BALBcJ_G0035772.1 mouse_genomes_project X 68212927 68226421 - MGP_BALBcJ_P0096361 protein_coding protein_coding MGP_BALBcJ_T0097464.1 MGP_BALBcJ_G0036060.1 mouse_genomes_project X 131027568 131032842 + MGP_BALBcJ_P0097464 Bhlhb9 protein_coding protein_coding MGP_BALBcJ_T0097465.1 MGP_BALBcJ_G0036060.1 mouse_genomes_project X 131027570 131031090 + MGP_BALBcJ_P0097465 Bhlhb9 protein_coding protein_coding MGP_BALBcJ_T0097466.1 MGP_BALBcJ_G0036060.1 mouse_genomes_project X 131027570 131032845 + MGP_BALBcJ_P0097466 Bhlhb9 protein_coding protein_coding MGP_BALBcJ_T0097467.1 MGP_BALBcJ_G0036060.1 mouse_genomes_project X 131027700 131029234 + Bhlhb9 protein_coding retained_intron MGP_BALBcJ_T0096119.1 MGP_BALBcJ_G0035683.1 mouse_genomes_project X 46582851 46586928 - MGP_BALBcJ_P0096119 1700080O16Rik protein_coding protein_coding MGP_BALBcJ_T0096120.1 MGP_BALBcJ_G0035683.1 mouse_genomes_project X 46583048 46585204 - MGP_BALBcJ_P0096120 1700080O16Rik protein_coding protein_coding MGP_BALBcJ_T0011142.1 MGP_BALBcJ_G0009267.1 mouse_genomes_project X 61840410 61840488 - Mir880 miRNA miRNA MGP_BALBcJ_T0016540.1 MGP_BALBcJ_G0014637.1 mouse_genomes_project X 98716191 98716615 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016199.1 MGP_BALBcJ_G0014296.1 mouse_genomes_project X 14440174 14440571 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097384.1 MGP_BALBcJ_G0036039.1 mouse_genomes_project X 129332895 129390471 + MGP_BALBcJ_P0097384 Cenpi protein_coding protein_coding MGP_BALBcJ_T0097385.1 MGP_BALBcJ_G0036039.1 mouse_genomes_project X 129332966 129390468 + MGP_BALBcJ_P0097385 Cenpi protein_coding protein_coding MGP_BALBcJ_T0097386.1 MGP_BALBcJ_G0036039.1 mouse_genomes_project X 129333010 129335062 + MGP_BALBcJ_P0097386 Cenpi protein_coding protein_coding MGP_BALBcJ_T0097387.1 MGP_BALBcJ_G0036039.1 mouse_genomes_project X 129337308 129372103 + Cenpi protein_coding processed_transcript MGP_BALBcJ_T0097388.1 MGP_BALBcJ_G0036039.1 mouse_genomes_project X 129373772 129390469 + Cenpi protein_coding processed_transcript MGP_BALBcJ_T0016648.1 MGP_BALBcJ_G0014745.1 mouse_genomes_project X 117101122 117102679 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101796.1 MGP_BALBcJ_G0039736.1 mouse_genomes_project X 67789303 67790202 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101797.1 MGP_BALBcJ_G0039736.1 mouse_genomes_project X 67789303 67790035 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0096362.1 MGP_BALBcJ_G0035773.1 mouse_genomes_project X 68342025 68358473 + MGP_BALBcJ_P0096362 Zfp275 protein_coding protein_coding MGP_BALBcJ_T0096363.1 MGP_BALBcJ_G0035773.1 mouse_genomes_project X 68343851 68351231 + Zfp275 protein_coding retained_intron MGP_BALBcJ_T0096826.1 MGP_BALBcJ_G0035872.1 mouse_genomes_project X 88455056 88456994 + Arx protein_coding retained_intron MGP_BALBcJ_T0096827.1 MGP_BALBcJ_G0035872.1 mouse_genomes_project X 88455107 88466931 + MGP_BALBcJ_P0096827 Arx protein_coding protein_coding MGP_BALBcJ_T0096828.1 MGP_BALBcJ_G0035872.1 mouse_genomes_project X 88455121 88466636 + MGP_BALBcJ_P0096828 Arx protein_coding protein_coding MGP_BALBcJ_T0016444.1 MGP_BALBcJ_G0014541.1 mouse_genomes_project X 83379192 83379534 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098703.1 MGP_BALBcJ_G0036757.1 mouse_genomes_project X 154705808 154705917 + Gm23806 rRNA rRNA MGP_BALBcJ_T0016308.1 MGP_BALBcJ_G0014405.1 mouse_genomes_project X 53173997 53174677 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016172.1 MGP_BALBcJ_G0014269.1 mouse_genomes_project X 7449742 7449850 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016312.1 MGP_BALBcJ_G0014409.1 mouse_genomes_project X 53644351 53644813 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016693.1 MGP_BALBcJ_G0014790.1 mouse_genomes_project X 131906645 131907052 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095927.1 MGP_BALBcJ_G0035630.1 mouse_genomes_project X 32826905 32835420 + MGP_BALBcJ_P0095927 Rhox13 protein_coding protein_coding MGP_BALBcJ_T0098686.1 MGP_BALBcJ_G0036740.1 mouse_genomes_project X 8017671 8017783 - n-R5s3 rRNA rRNA MGP_BALBcJ_T0097162.1 MGP_BALBcJ_G0035967.1 mouse_genomes_project X 101144988 101155811 + MGP_BALBcJ_P0097162 Fgf16 protein_coding protein_coding MGP_BALBcJ_T0096547.1 MGP_BALBcJ_G0035801.1 mouse_genomes_project X 69263072 69266271 + MGP_BALBcJ_P0096547 Emd protein_coding protein_coding MGP_BALBcJ_T0096548.1 MGP_BALBcJ_G0035801.1 mouse_genomes_project X 69263137 69265745 + MGP_BALBcJ_P0096548 Emd protein_coding protein_coding MGP_BALBcJ_T0096549.1 MGP_BALBcJ_G0035801.1 mouse_genomes_project X 69263146 69264071 + Emd protein_coding processed_transcript MGP_BALBcJ_T0096550.1 MGP_BALBcJ_G0035801.1 mouse_genomes_project X 69263195 69269382 + MGP_BALBcJ_P0096550 Emd protein_coding protein_coding MGP_BALBcJ_T0096551.1 MGP_BALBcJ_G0035801.1 mouse_genomes_project X 69263201 69265707 + MGP_BALBcJ_P0096551 Emd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096552.1 MGP_BALBcJ_G0035801.1 mouse_genomes_project X 69263215 69270208 + MGP_BALBcJ_P0096552 Emd protein_coding protein_coding MGP_BALBcJ_T0095447.1 MGP_BALBcJ_G0035484.1 mouse_genomes_project X 1963247 1967787 - MGP_BALBcJ_P0095447 Usp27x protein_coding protein_coding MGP_BALBcJ_T0095448.1 MGP_BALBcJ_G0035484.1 mouse_genomes_project X 1964551 1967791 - MGP_BALBcJ_P0095448 Usp27x protein_coding protein_coding MGP_BALBcJ_T0097378.1 MGP_BALBcJ_G0036037.1 mouse_genomes_project X 129244789 129301313 - MGP_BALBcJ_P0097378 Trmt2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097379.1 MGP_BALBcJ_G0036037.1 mouse_genomes_project X 129245545 129301313 - MGP_BALBcJ_P0097379 Trmt2b protein_coding protein_coding MGP_BALBcJ_T0097380.1 MGP_BALBcJ_G0036037.1 mouse_genomes_project X 129245546 129301258 - Trmt2b protein_coding retained_intron MGP_BALBcJ_T0097381.1 MGP_BALBcJ_G0036037.1 mouse_genomes_project X 129245550 129301251 - MGP_BALBcJ_P0097381 Trmt2b protein_coding protein_coding MGP_BALBcJ_T0097382.1 MGP_BALBcJ_G0036037.1 mouse_genomes_project X 129286936 129301315 - MGP_BALBcJ_P0097382 Trmt2b protein_coding protein_coding MGP_BALBcJ_T0016196.1 MGP_BALBcJ_G0014293.1 mouse_genomes_project X 13622974 13623380 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098138.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164094308 164601691 + MGP_BALBcJ_P0098138 Arhgap6 protein_coding protein_coding MGP_BALBcJ_T0098139.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164335557 164552585 + Arhgap6 protein_coding retained_intron MGP_BALBcJ_T0098140.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164335557 164555132 + MGP_BALBcJ_P0098140 Arhgap6 protein_coding protein_coding MGP_BALBcJ_T0098141.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164335557 164560008 + MGP_BALBcJ_P0098141 Arhgap6 protein_coding protein_coding MGP_BALBcJ_T0098142.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164335557 164601691 + MGP_BALBcJ_P0098142 Arhgap6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098143.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164335557 164601691 + MGP_BALBcJ_P0098143 Arhgap6 protein_coding protein_coding MGP_BALBcJ_T0098144.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164412532 164601691 + MGP_BALBcJ_P0098144 Arhgap6 protein_coding protein_coding MGP_BALBcJ_T0098150.1 MGP_BALBcJ_G0036239.1 mouse_genomes_project X 164516245 164592367 + MGP_BALBcJ_P0098150 Arhgap6 protein_coding unknown_likely_coding MGP_BALBcJ_T0016227.1 MGP_BALBcJ_G0014324.1 mouse_genomes_project X 31770301 31772616 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100268.1 MGP_BALBcJ_G0038304.1 mouse_genomes_project X 83188122 83188229 + Gm25006 snRNA snRNA MGP_BALBcJ_T0016767.1 MGP_BALBcJ_G0014864.1 mouse_genomes_project X 141754361 141755297 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095606.1 MGP_BALBcJ_G0035516.1 mouse_genomes_project X 2774495 2796455 - MGP_BALBcJ_P0095606 Tbc1d25 protein_coding protein_coding MGP_BALBcJ_T0095607.1 MGP_BALBcJ_G0035516.1 mouse_genomes_project X 2774495 2796455 - MGP_BALBcJ_P0095607 Tbc1d25 protein_coding protein_coding MGP_BALBcJ_T0095608.1 MGP_BALBcJ_G0035516.1 mouse_genomes_project X 2774506 2796232 - Tbc1d25 protein_coding retained_intron MGP_BALBcJ_T0095609.1 MGP_BALBcJ_G0035516.1 mouse_genomes_project X 2774728 2796144 - MGP_BALBcJ_P0095609 Tbc1d25 protein_coding protein_coding MGP_BALBcJ_T0098129.1 MGP_BALBcJ_G0036236.1 mouse_genomes_project X 162607920 162644251 - MGP_BALBcJ_P0098129 Prps2 protein_coding protein_coding MGP_BALBcJ_T0098130.1 MGP_BALBcJ_G0036236.1 mouse_genomes_project X 162633932 162644212 - Prps2 protein_coding processed_transcript MGP_BALBcJ_T0097300.1 MGP_BALBcJ_G0036008.1 mouse_genomes_project X 108247220 108397830 - MGP_BALBcJ_P0097300 Chm protein_coding protein_coding MGP_BALBcJ_T0097301.1 MGP_BALBcJ_G0036008.1 mouse_genomes_project X 108249801 108254197 - Chm protein_coding processed_transcript MGP_BALBcJ_T0097302.1 MGP_BALBcJ_G0036008.1 mouse_genomes_project X 108269159 108391745 - Chm protein_coding processed_transcript MGP_BALBcJ_T0097303.1 MGP_BALBcJ_G0036008.1 mouse_genomes_project X 108326683 108391745 - Chm protein_coding processed_transcript MGP_BALBcJ_T0016335.1 MGP_BALBcJ_G0014432.1 mouse_genomes_project X 57167509 57168609 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016203.1 MGP_BALBcJ_G0014300.1 mouse_genomes_project X 15068183 15068589 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100249.1 MGP_BALBcJ_G0038285.1 mouse_genomes_project X 40508909 40509016 - Gm25078 snRNA snRNA MGP_BALBcJ_T0016410.1 MGP_BALBcJ_G0014507.1 mouse_genomes_project X 73722435 73723390 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016568.1 MGP_BALBcJ_G0014665.1 mouse_genomes_project X 102053309 102053602 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016624.1 MGP_BALBcJ_G0014721.1 mouse_genomes_project X 112324890 112325163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102848.1 MGP_BALBcJ_G0040663.1 mouse_genomes_project X 32118800 32127430 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0095818.1 MGP_BALBcJ_G0035579.1 mouse_genomes_project X 16473924 16501553 + MGP_BALBcJ_P0095818 Slc6a14 protein_coding protein_coding MGP_BALBcJ_T0097025.1 MGP_BALBcJ_G0035924.1 mouse_genomes_project X 96508934 96512751 - MGP_BALBcJ_P0097025 Il2rg protein_coding protein_coding MGP_BALBcJ_T0097026.1 MGP_BALBcJ_G0035924.1 mouse_genomes_project X 96509494 96511930 - MGP_BALBcJ_P0097026 Il2rg protein_coding protein_coding MGP_BALBcJ_T0097027.1 MGP_BALBcJ_G0035924.1 mouse_genomes_project X 96511161 96512686 - Il2rg protein_coding retained_intron MGP_BALBcJ_T0097028.1 MGP_BALBcJ_G0035924.1 mouse_genomes_project X 96511691 96512654 - Il2rg protein_coding processed_transcript MGP_BALBcJ_T0096712.1 MGP_BALBcJ_G0035826.1 mouse_genomes_project X 70439084 70453613 + MGP_BALBcJ_P0096712 Fundc2 protein_coding protein_coding MGP_BALBcJ_T0096713.1 MGP_BALBcJ_G0035826.1 mouse_genomes_project X 70439111 70444176 + Fundc2 protein_coding retained_intron MGP_BALBcJ_T0096714.1 MGP_BALBcJ_G0035826.1 mouse_genomes_project X 70443802 70451482 + Fundc2 protein_coding processed_transcript MGP_BALBcJ_T0016430.1 MGP_BALBcJ_G0014527.1 mouse_genomes_project X 80155626 80155829 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095883.1 MGP_BALBcJ_G0035604.1 mouse_genomes_project X 31922933 31926523 - MGP_BALBcJ_P0095883 Ndufa1 protein_coding protein_coding MGP_BALBcJ_T0016448.1 MGP_BALBcJ_G0014545.1 mouse_genomes_project X 83693736 83693994 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016847.1 MGP_BALBcJ_G0014944.1 mouse_genomes_project X 160132173 160132450 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016681.1 MGP_BALBcJ_G0014778.1 mouse_genomes_project X 129894624 129895530 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016345.1 MGP_BALBcJ_G0014442.1 mouse_genomes_project X 59903628 59904990 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096195.1 MGP_BALBcJ_G0035716.1 mouse_genomes_project X 52181878 52193446 + MGP_BALBcJ_P0096195 Cd40lg protein_coding protein_coding MGP_BALBcJ_T0016522.1 MGP_BALBcJ_G0014619.1 mouse_genomes_project X 97058498 97059379 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095966.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36496492 36517529 - MGP_BALBcJ_P0095966 Thoc2 protein_coding protein_coding MGP_BALBcJ_T0095967.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36496495 36626165 - MGP_BALBcJ_P0095967 Thoc2 protein_coding protein_coding MGP_BALBcJ_T0095968.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36498610 36517903 - MGP_BALBcJ_P0095968 Thoc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095969.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36498984 36509673 - MGP_BALBcJ_P0095969 Thoc2 protein_coding protein_coding MGP_BALBcJ_T0095970.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36505615 36510161 - MGP_BALBcJ_P0095970 Thoc2 protein_coding protein_coding MGP_BALBcJ_T0095971.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36505627 36509825 - MGP_BALBcJ_P0095971 Thoc2 protein_coding protein_coding MGP_BALBcJ_T0095972.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36506799 36516998 - Thoc2 protein_coding processed_transcript MGP_BALBcJ_T0095973.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36515286 36517605 - Thoc2 protein_coding retained_intron MGP_BALBcJ_T0095974.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36517480 36569163 - Thoc2 protein_coding processed_transcript MGP_BALBcJ_T0095975.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36517876 36541053 - Thoc2 protein_coding retained_intron MGP_BALBcJ_T0095976.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36527553 36541195 - Thoc2 protein_coding retained_intron MGP_BALBcJ_T0095977.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36566795 36626195 - Thoc2 protein_coding retained_intron MGP_BALBcJ_T0095978.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36570333 36626180 - MGP_BALBcJ_P0095978 Thoc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095979.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36584152 36634955 - MGP_BALBcJ_P0095979 Thoc2 protein_coding protein_coding MGP_BALBcJ_T0095980.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36584156 36608883 - MGP_BALBcJ_P0095980 Thoc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095981.1 MGP_BALBcJ_G0035642.1 mouse_genomes_project X 36590036 36610338 - Thoc2 protein_coding retained_intron MGP_BALBcJ_T0016513.1 MGP_BALBcJ_G0014610.1 mouse_genomes_project X 95584886 95586041 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100252.1 MGP_BALBcJ_G0038288.1 mouse_genomes_project X 42970415 42970516 + Gm22612 snRNA snRNA MGP_BALBcJ_T0016278.1 MGP_BALBcJ_G0014375.1 mouse_genomes_project X 44974441 44975321 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095614.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2814526 2827190 - MGP_BALBcJ_P0095614 Porcn protein_coding protein_coding MGP_BALBcJ_T0095615.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2814527 2827156 - MGP_BALBcJ_P0095615 Porcn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095616.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2814528 2827166 - MGP_BALBcJ_P0095616 Porcn protein_coding protein_coding MGP_BALBcJ_T0095617.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2814528 2827166 - MGP_BALBcJ_P0095617 Porcn protein_coding protein_coding MGP_BALBcJ_T0095618.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2814528 2827166 - MGP_BALBcJ_P0095618 Porcn protein_coding protein_coding MGP_BALBcJ_T0095619.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2814531 2827162 - MGP_BALBcJ_P0095619 Porcn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095620.1 MGP_BALBcJ_G0035518.1 mouse_genomes_project X 2824103 2827178 - Porcn protein_coding retained_intron MGP_BALBcJ_T0011093.1 MGP_BALBcJ_G0009218.1 mouse_genomes_project X 1830899 1831008 - Mir501 miRNA miRNA MGP_BALBcJ_T0096951.1 MGP_BALBcJ_G0035903.1 mouse_genomes_project X 94385492 94398306 + MGP_BALBcJ_P0096951 Efnb1 protein_coding protein_coding MGP_BALBcJ_T0096952.1 MGP_BALBcJ_G0035903.1 mouse_genomes_project X 94387489 94396547 + Efnb1 protein_coding processed_transcript MGP_BALBcJ_T0016150.1 MGP_BALBcJ_G0014247.1 mouse_genomes_project X 2648027 2648895 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011170.1 MGP_BALBcJ_G0009295.1 mouse_genomes_project X 97286676 97286780 - Gm27843 miRNA miRNA MGP_BALBcJ_T0016412.1 MGP_BALBcJ_G0014509.1 mouse_genomes_project X 73858319 73859427 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096823.1 MGP_BALBcJ_G0035870.1 mouse_genomes_project X 87283445 87776797 - MGP_BALBcJ_P0096823 Mageb18 protein_coding protein_coding MGP_BALBcJ_T0096824.1 MGP_BALBcJ_G0035870.1 mouse_genomes_project X 87283767 87285338 - MGP_BALBcJ_P0096824 Mageb18 protein_coding protein_coding MGP_BALBcJ_T0005592.1 MGP_BALBcJ_G0004712.1 mouse_genomes_project X 155796627 155802458 - Gm15243 antisense antisense MGP_BALBcJ_T0098065.1 MGP_BALBcJ_G0036219.1 mouse_genomes_project X 159683029 159697149 + MGP_BALBcJ_P0098065 Piga protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098066.1 MGP_BALBcJ_G0036219.1 mouse_genomes_project X 159683029 159697144 + MGP_BALBcJ_P0098066 Piga protein_coding protein_coding MGP_BALBcJ_T0098067.1 MGP_BALBcJ_G0036219.1 mouse_genomes_project X 159683054 159697142 + MGP_BALBcJ_P0098067 Piga protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098068.1 MGP_BALBcJ_G0036219.1 mouse_genomes_project X 159683145 159697146 + MGP_BALBcJ_P0098068 Piga protein_coding protein_coding MGP_BALBcJ_T0098069.1 MGP_BALBcJ_G0036219.1 mouse_genomes_project X 159685822 159695211 + MGP_BALBcJ_P0098069 Piga protein_coding protein_coding MGP_BALBcJ_T0098070.1 MGP_BALBcJ_G0036219.1 mouse_genomes_project X 159688752 159695298 + Piga protein_coding retained_intron MGP_BALBcJ_T0095432.1 MGP_BALBcJ_G0035477.1 mouse_genomes_project X 785814 790136 - MGP_BALBcJ_P0095432 Nudt10 protein_coding protein_coding MGP_BALBcJ_T0011741.1 MGP_BALBcJ_G0009866.1 mouse_genomes_project X 82891871 82892155 - Gm24812 misc_RNA misc_RNA MGP_BALBcJ_T0096794.1 MGP_BALBcJ_G0035854.1 mouse_genomes_project X 80482705 80522633 + MGP_BALBcJ_P0096794 protein_coding protein_coding MGP_BALBcJ_T0096795.1 MGP_BALBcJ_G0035854.1 mouse_genomes_project X 80482710 80484297 + protein_coding processed_transcript MGP_BALBcJ_T0096796.1 MGP_BALBcJ_G0035854.1 mouse_genomes_project X 80482821 80522423 + MGP_BALBcJ_P0096796 protein_coding protein_coding MGP_BALBcJ_T0096797.1 MGP_BALBcJ_G0035854.1 mouse_genomes_project X 80482922 80542911 + MGP_BALBcJ_P0096797 protein_coding unknown_likely_coding MGP_BALBcJ_T0009352.1 MGP_BALBcJ_G0007506.1 mouse_genomes_project X 31546685 31549088 - Mdrl lincRNA lincRNA MGP_BALBcJ_T0102864.1 MGP_BALBcJ_G0040679.1 mouse_genomes_project X 71472280 71473240 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097100.1 MGP_BALBcJ_G0035939.1 mouse_genomes_project X 97395676 97403899 + MGP_BALBcJ_P0097100 Pin4 protein_coding protein_coding MGP_BALBcJ_T0097101.1 MGP_BALBcJ_G0035939.1 mouse_genomes_project X 97395798 97403896 + Pin4 protein_coding processed_transcript MGP_BALBcJ_T0097620.1 MGP_BALBcJ_G0036114.1 mouse_genomes_project X 137007626 137008983 - MGP_BALBcJ_P0097620 protein_coding protein_coding MGP_BALBcJ_T0096149.1 MGP_BALBcJ_G0035700.1 mouse_genomes_project X 48415811 48418158 - MGP_BALBcJ_P0096149 Zfp36l3 protein_coding protein_coding MGP_BALBcJ_T0005597.1 MGP_BALBcJ_G0004717.1 mouse_genomes_project X 165270116 165272388 - antisense antisense MGP_BALBcJ_T0016628.1 MGP_BALBcJ_G0014725.1 mouse_genomes_project X 112733341 112735347 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016572.1 MGP_BALBcJ_G0014669.1 mouse_genomes_project X 102181118 102181524 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096798.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80613995 80691664 - MGP_BALBcJ_P0096798 Gk protein_coding protein_coding MGP_BALBcJ_T0096799.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80613995 80691651 - MGP_BALBcJ_P0096799 Gk protein_coding protein_coding MGP_BALBcJ_T0096800.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80613995 80691846 - MGP_BALBcJ_P0096800 Gk protein_coding protein_coding MGP_BALBcJ_T0096801.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80613995 80691680 - MGP_BALBcJ_P0096801 Gk protein_coding protein_coding MGP_BALBcJ_T0096802.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80619054 80624464 - Gk protein_coding processed_transcript MGP_BALBcJ_T0096803.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80624383 80626447 - Gk protein_coding retained_intron MGP_BALBcJ_T0096804.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80624680 80648373 - Gk protein_coding retained_intron MGP_BALBcJ_T0096805.1 MGP_BALBcJ_G0035855.1 mouse_genomes_project X 80672118 80675577 - Gk protein_coding retained_intron MGP_BALBcJ_T0098702.1 MGP_BALBcJ_G0036756.1 mouse_genomes_project X 152901978 152902072 - Gm23381 rRNA rRNA MGP_BALBcJ_T0100245.1 MGP_BALBcJ_G0038281.1 mouse_genomes_project X 31148597 31148695 - Gm22364 snRNA snRNA MGP_BALBcJ_T0011149.1 MGP_BALBcJ_G0009274.1 mouse_genomes_project X 61868992 61869066 - Mir465 miRNA miRNA MGP_BALBcJ_T0016541.1 MGP_BALBcJ_G0014638.1 mouse_genomes_project X 98864663 98865118 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016596.1 MGP_BALBcJ_G0014693.1 mouse_genomes_project X 107697768 107700165 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101538.1 MGP_BALBcJ_G0039574.1 mouse_genomes_project X 89666780 89666890 - Gm24595 snoRNA snoRNA MGP_BALBcJ_T0101554.1 MGP_BALBcJ_G0039590.1 mouse_genomes_project X 137621007 137621133 - Gm25915 snoRNA snoRNA MGP_BALBcJ_T0097538.1 MGP_BALBcJ_G0036087.1 mouse_genomes_project X 134308426 134315589 + MGP_BALBcJ_P0097538 4930513O06Rik protein_coding protein_coding MGP_BALBcJ_T0100282.1 MGP_BALBcJ_G0038318.1 mouse_genomes_project X 104416155 104416262 - Gm25797 snRNA snRNA MGP_BALBcJ_T0096972.1 MGP_BALBcJ_G0035908.1 mouse_genomes_project X 95676424 95677297 + MGP_BALBcJ_P0096972 Otud6a protein_coding protein_coding MGP_BALBcJ_T0016219.1 MGP_BALBcJ_G0014316.1 mouse_genomes_project X 18586826 18588042 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097158.1 MGP_BALBcJ_G0035965.1 mouse_genomes_project X 100480151 100485582 + MGP_BALBcJ_P0097158 Pbdc1 protein_coding protein_coding MGP_BALBcJ_T0097159.1 MGP_BALBcJ_G0035965.1 mouse_genomes_project X 100480156 100518142 + MGP_BALBcJ_P0097159 Pbdc1 protein_coding protein_coding MGP_BALBcJ_T0097160.1 MGP_BALBcJ_G0035965.1 mouse_genomes_project X 100480170 100483556 + Pbdc1 protein_coding retained_intron MGP_BALBcJ_T0097099.1 MGP_BALBcJ_G0035938.1 mouse_genomes_project X 97381793 97382808 - MGP_BALBcJ_P0097099 protein_coding protein_coding MGP_BALBcJ_T0097252.1 MGP_BALBcJ_G0035989.1 mouse_genomes_project X 104043011 104043899 - MGP_BALBcJ_P0097252 Gm379 protein_coding protein_coding MGP_BALBcJ_T0096708.1 MGP_BALBcJ_G0035825.1 mouse_genomes_project X 70234855 70439002 - MGP_BALBcJ_P0096708 F8 protein_coding protein_coding MGP_BALBcJ_T0096709.1 MGP_BALBcJ_G0035825.1 mouse_genomes_project X 70234859 70436727 - MGP_BALBcJ_P0096709 F8 protein_coding protein_coding MGP_BALBcJ_T0096710.1 MGP_BALBcJ_G0035825.1 mouse_genomes_project X 70395067 70439305 - MGP_BALBcJ_P0096710 F8 protein_coding protein_coding MGP_BALBcJ_T0096711.1 MGP_BALBcJ_G0035825.1 mouse_genomes_project X 70410765 70438977 - MGP_BALBcJ_P0096711 F8 protein_coding protein_coding MGP_BALBcJ_T0011105.1 MGP_BALBcJ_G0009230.1 mouse_genomes_project X 18725838 18725940 + Gm25299 miRNA miRNA MGP_BALBcJ_T0005568.1 MGP_BALBcJ_G0004694.1 mouse_genomes_project X 68400048 68409348 - Gm26726 antisense antisense MGP_BALBcJ_T0097117.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97786799 97913507 - MGP_BALBcJ_P0097117 Phka1 protein_coding protein_coding MGP_BALBcJ_T0097118.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97786799 97913507 - MGP_BALBcJ_P0097118 Phka1 protein_coding protein_coding MGP_BALBcJ_T0097119.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97786799 97913507 - MGP_BALBcJ_P0097119 Phka1 protein_coding protein_coding MGP_BALBcJ_T0097120.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97786799 97913507 - MGP_BALBcJ_P0097120 Phka1 protein_coding protein_coding MGP_BALBcJ_T0097121.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97786799 97913507 - MGP_BALBcJ_P0097121 Phka1 protein_coding protein_coding MGP_BALBcJ_T0097122.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97786799 97913507 - MGP_BALBcJ_P0097122 Phka1 protein_coding protein_coding MGP_BALBcJ_T0097123.1 MGP_BALBcJ_G0035944.1 mouse_genomes_project X 97826636 97913507 - Phka1 protein_coding retained_intron MGP_BALBcJ_T0096516.1 MGP_BALBcJ_G0035796.1 mouse_genomes_project X 69030680 69089888 - MGP_BALBcJ_P0096516 Mecp2 protein_coding protein_coding MGP_BALBcJ_T0096517.1 MGP_BALBcJ_G0035796.1 mouse_genomes_project X 69030916 69084252 - MGP_BALBcJ_P0096517 Mecp2 protein_coding protein_coding MGP_BALBcJ_T0096518.1 MGP_BALBcJ_G0035796.1 mouse_genomes_project X 69039377 69089909 - MGP_BALBcJ_P0096518 Mecp2 protein_coding protein_coding MGP_BALBcJ_T0096519.1 MGP_BALBcJ_G0035796.1 mouse_genomes_project X 69039378 69089831 - MGP_BALBcJ_P0096519 Mecp2 protein_coding protein_coding MGP_BALBcJ_T0096520.1 MGP_BALBcJ_G0035796.1 mouse_genomes_project X 69039759 69089829 - MGP_BALBcJ_P0096520 Mecp2 protein_coding protein_coding MGP_BALBcJ_T0096521.1 MGP_BALBcJ_G0035796.1 mouse_genomes_project X 69085251 69089816 - Mecp2 protein_coding retained_intron MGP_BALBcJ_T0016645.1 MGP_BALBcJ_G0014742.1 mouse_genomes_project X 116388131 116388778 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096864.1 MGP_BALBcJ_G0035881.1 mouse_genomes_project X 89579622 89623263 + MGP_BALBcJ_P0096864 Apoo protein_coding protein_coding MGP_BALBcJ_T0096865.1 MGP_BALBcJ_G0035881.1 mouse_genomes_project X 89579622 89628624 + MGP_BALBcJ_P0096865 Apoo protein_coding protein_coding MGP_BALBcJ_T0016228.1 MGP_BALBcJ_G0014325.1 mouse_genomes_project X 33125289 33125691 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101567.1 MGP_BALBcJ_G0039603.1 mouse_genomes_project X 159542168 159542298 + Gm22023 snoRNA snoRNA MGP_BALBcJ_T0016192.1 MGP_BALBcJ_G0014289.1 mouse_genomes_project X 12431806 12433661 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096218.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54001737 54503807 - MGP_BALBcJ_P0096218 Fgf13 protein_coding protein_coding MGP_BALBcJ_T0096219.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54001737 54074685 - MGP_BALBcJ_P0096219 Fgf13 protein_coding protein_coding MGP_BALBcJ_T0096220.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54001737 54107240 - MGP_BALBcJ_P0096220 Fgf13 protein_coding protein_coding MGP_BALBcJ_T0096221.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54003082 54073463 - Fgf13 protein_coding processed_transcript MGP_BALBcJ_T0096222.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54072124 54073411 - Fgf13 protein_coding processed_transcript MGP_BALBcJ_T0096223.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54072127 54503208 - MGP_BALBcJ_P0096223 Fgf13 protein_coding protein_coding MGP_BALBcJ_T0096224.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54196144 54503807 - MGP_BALBcJ_P0096224 Fgf13 protein_coding protein_coding MGP_BALBcJ_T0096225.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54196221 54503557 - MGP_BALBcJ_P0096225 Fgf13 protein_coding protein_coding MGP_BALBcJ_T0096226.1 MGP_BALBcJ_G0035723.1 mouse_genomes_project X 54502549 54503784 - Fgf13 protein_coding retained_intron MGP_BALBcJ_T0011765.1 MGP_BALBcJ_G0009890.1 mouse_genomes_project X 157927341 157927656 + Gm25557 misc_RNA misc_RNA MGP_BALBcJ_T0095936.1 MGP_BALBcJ_G0035633.1 mouse_genomes_project X 33029861 33050434 + MGP_BALBcJ_P0095936 Atp1b4 protein_coding protein_coding MGP_BALBcJ_T0095937.1 MGP_BALBcJ_G0035633.1 mouse_genomes_project X 33029861 33050434 + MGP_BALBcJ_P0095937 Atp1b4 protein_coding protein_coding MGP_BALBcJ_T0009369.1 MGP_BALBcJ_G0007519.1 mouse_genomes_project X 76012536 76014930 - Gm26775 lincRNA lincRNA MGP_BALBcJ_T0096930.1 MGP_BALBcJ_G0035899.1 mouse_genomes_project X 93407431 93578928 + MGP_BALBcJ_P0096930 Ar protein_coding protein_coding MGP_BALBcJ_T0101537.1 MGP_BALBcJ_G0039573.1 mouse_genomes_project X 88419175 88419308 + Gm23454 snoRNA snoRNA MGP_BALBcJ_T0096814.1 MGP_BALBcJ_G0035861.1 mouse_genomes_project X 84776765 84779989 + MGP_BALBcJ_P0096814 4932429P05Rik protein_coding protein_coding MGP_BALBcJ_T0016344.1 MGP_BALBcJ_G0014441.1 mouse_genomes_project X 59812858 59813716 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101514.1 MGP_BALBcJ_G0039550.1 mouse_genomes_project X 2139221 2139354 - Gm23082 snoRNA snoRNA MGP_BALBcJ_T0095698.1 MGP_BALBcJ_G0035543.1 mouse_genomes_project X 8265736 8290732 + MGP_BALBcJ_P0095698 Nyx protein_coding protein_coding MGP_BALBcJ_T0016821.1 MGP_BALBcJ_G0014918.1 mouse_genomes_project X 154662800 154663064 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016650.1 MGP_BALBcJ_G0014747.1 mouse_genomes_project X 117446703 117447006 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098030.1 MGP_BALBcJ_G0036207.1 mouse_genomes_project X 158205626 158208224 - MGP_BALBcJ_P0098030 S100g protein_coding protein_coding MGP_BALBcJ_T0016728.1 MGP_BALBcJ_G0014825.1 mouse_genomes_project X 137003287 137003558 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096095.1 MGP_BALBcJ_G0035674.1 mouse_genomes_project X 44497988 44498921 - MGP_BALBcJ_P0096095 Olfr1322 protein_coding protein_coding MGP_BALBcJ_T0096466.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68920888 68923878 - Naa10 protein_coding processed_transcript MGP_BALBcJ_T0096467.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68920888 68925910 - MGP_BALBcJ_P0096467 Naa10 protein_coding protein_coding MGP_BALBcJ_T0096468.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68920890 68925890 - MGP_BALBcJ_P0096468 Naa10 protein_coding protein_coding MGP_BALBcJ_T0096469.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68920902 68925854 - MGP_BALBcJ_P0096469 Naa10 protein_coding protein_coding MGP_BALBcJ_T0096470.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68920911 68925850 - MGP_BALBcJ_P0096470 Naa10 protein_coding protein_coding MGP_BALBcJ_T0096471.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68920935 68925798 - MGP_BALBcJ_P0096471 Naa10 protein_coding protein_coding MGP_BALBcJ_T0096472.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68921107 68923920 - Naa10 protein_coding processed_transcript MGP_BALBcJ_T0096473.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68921489 68925794 - MGP_BALBcJ_P0096473 Naa10 protein_coding protein_coding MGP_BALBcJ_T0096474.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68921876 68924478 - Naa10 protein_coding retained_intron MGP_BALBcJ_T0096475.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68922084 68925872 - Naa10 protein_coding retained_intron MGP_BALBcJ_T0096476.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68924942 68925821 - Naa10 protein_coding retained_intron MGP_BALBcJ_T0096477.1 MGP_BALBcJ_G0035792.1 mouse_genomes_project X 68925078 68925818 - Naa10 protein_coding retained_intron MGP_BALBcJ_T0016504.1 MGP_BALBcJ_G0014601.1 mouse_genomes_project X 93294570 93296455 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016280.1 MGP_BALBcJ_G0014377.1 mouse_genomes_project X 45667886 45668743 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016614.1 MGP_BALBcJ_G0014711.1 mouse_genomes_project X 110104129 110104588 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016490.1 MGP_BALBcJ_G0014587.1 mouse_genomes_project X 90289585 90290830 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101515.1 MGP_BALBcJ_G0039551.1 mouse_genomes_project X 16258700 16258831 - Gm22592 snoRNA snoRNA MGP_BALBcJ_T0102866.1 MGP_BALBcJ_G0040681.1 mouse_genomes_project X 73126840 73139151 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016305.1 MGP_BALBcJ_G0014402.1 mouse_genomes_project X 52693976 52694963 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101545.1 MGP_BALBcJ_G0039581.1 mouse_genomes_project X 115990143 115990271 + Gm22590 snoRNA snoRNA MGP_BALBcJ_T0016548.1 MGP_BALBcJ_G0014645.1 mouse_genomes_project X 99069813 99070132 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009356.1 MGP_BALBcJ_G0007510.1 mouse_genomes_project X 43949556 43980995 - Gm14696 lincRNA lincRNA MGP_BALBcJ_T0016349.1 MGP_BALBcJ_G0014446.1 mouse_genomes_project X 61059408 61059666 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102851.1 MGP_BALBcJ_G0040666.1 mouse_genomes_project X 32635296 32640083 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016415.1 MGP_BALBcJ_G0014512.1 mouse_genomes_project X 74939355 74940198 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101523.1 MGP_BALBcJ_G0039559.1 mouse_genomes_project X 63516108 63516234 + Gm22332 snoRNA snoRNA MGP_BALBcJ_T0096909.1 MGP_BALBcJ_G0035893.1 mouse_genomes_project X 91540546 91577934 - MGP_BALBcJ_P0096909 Vsig4 protein_coding protein_coding MGP_BALBcJ_T0096910.1 MGP_BALBcJ_G0035893.1 mouse_genomes_project X 91543293 91577908 - Vsig4 protein_coding processed_transcript MGP_BALBcJ_T0009360.1 MGP_BALBcJ_G0007512.1 mouse_genomes_project X 51267546 51270599 + 1600025M17Rik lincRNA lincRNA MGP_BALBcJ_T0009361.1 MGP_BALBcJ_G0007512.1 mouse_genomes_project X 51267604 51269459 + 1600025M17Rik lincRNA lincRNA MGP_BALBcJ_T0096671.1 MGP_BALBcJ_G0035815.1 mouse_genomes_project X 69492999 69495644 - MGP_BALBcJ_P0096671 protein_coding protein_coding MGP_BALBcJ_T0098777.1 MGP_BALBcJ_G0036831.1 mouse_genomes_project X 88741976 88742114 - Gm23557 scaRNA scaRNA MGP_BALBcJ_T0011759.1 MGP_BALBcJ_G0009884.1 mouse_genomes_project X 134890935 134891259 - Gm24380 misc_RNA misc_RNA MGP_BALBcJ_T0016407.1 MGP_BALBcJ_G0014504.1 mouse_genomes_project X 73464047 73470147 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016324.1 MGP_BALBcJ_G0014421.1 mouse_genomes_project X 55912512 55913237 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101799.1 MGP_BALBcJ_G0039738.1 mouse_genomes_project X 84010098 84010541 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101800.1 MGP_BALBcJ_G0039738.1 mouse_genomes_project X 84010151 84010358 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0096282.1 MGP_BALBcJ_G0035749.1 mouse_genomes_project X 65410612 65427971 - MGP_BALBcJ_P0096282 Tmem185a protein_coding protein_coding MGP_BALBcJ_T0096283.1 MGP_BALBcJ_G0035749.1 mouse_genomes_project X 65411818 65427971 - MGP_BALBcJ_P0096283 Tmem185a protein_coding protein_coding MGP_BALBcJ_T0096284.1 MGP_BALBcJ_G0035749.1 mouse_genomes_project X 65411913 65420970 - Tmem185a protein_coding processed_transcript MGP_BALBcJ_T0096285.1 MGP_BALBcJ_G0035749.1 mouse_genomes_project X 65413782 65427933 - Tmem185a protein_coding processed_transcript MGP_BALBcJ_T0016307.1 MGP_BALBcJ_G0014404.1 mouse_genomes_project X 53145339 53145663 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016217.1 MGP_BALBcJ_G0014314.1 mouse_genomes_project X 17206938 17207422 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096124.1 MGP_BALBcJ_G0035686.1 mouse_genomes_project X 47397541 47405821 + MGP_BALBcJ_P0096124 Ccdc160 protein_coding protein_coding MGP_BALBcJ_T0102887.1 MGP_BALBcJ_G0040702.1 mouse_genomes_project X 142843918 142844246 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100261.1 MGP_BALBcJ_G0038297.1 mouse_genomes_project X 59856970 59857076 + Gm26111 snRNA snRNA MGP_BALBcJ_T0098728.1 MGP_BALBcJ_G0036782.1 mouse_genomes_project X 148025141 148025382 + Gm24687 ribozyme ribozyme MGP_BALBcJ_T0097504.1 MGP_BALBcJ_G0036078.1 mouse_genomes_project X 132186731 132214960 - MGP_BALBcJ_P0097504 Tmsb15b1 protein_coding protein_coding MGP_BALBcJ_T0097262.1 MGP_BALBcJ_G0035993.1 mouse_genomes_project X 104588941 104590764 + MGP_BALBcJ_P0097262 Gm6377 protein_coding protein_coding MGP_BALBcJ_T0097263.1 MGP_BALBcJ_G0035993.1 mouse_genomes_project X 104588943 104592625 + MGP_BALBcJ_P0097263 Gm6377 protein_coding protein_coding MGP_BALBcJ_T0097316.1 MGP_BALBcJ_G0036012.1 mouse_genomes_project X 110012747 110013676 + MGP_BALBcJ_P0097316 Ube2dnl2 protein_coding protein_coding MGP_BALBcJ_T0005553.1 MGP_BALBcJ_G0004681.1 mouse_genomes_project X 31546685 31549103 + Gm14549 antisense antisense MGP_BALBcJ_T0018566.1 MGP_BALBcJ_G0015709.1 mouse_genomes_project X 2713996 2724367 + Gm6787 processed_transcript processed_transcript MGP_BALBcJ_T0096331.1 MGP_BALBcJ_G0035758.1 mouse_genomes_project X 66921229 66925257 + MGP_BALBcJ_P0096331 Prrg3 protein_coding protein_coding MGP_BALBcJ_T0096332.1 MGP_BALBcJ_G0035758.1 mouse_genomes_project X 66921230 66928712 + MGP_BALBcJ_P0096332 Prrg3 protein_coding protein_coding MGP_BALBcJ_T0096333.1 MGP_BALBcJ_G0035758.1 mouse_genomes_project X 66921587 66931330 + MGP_BALBcJ_P0096333 Prrg3 protein_coding protein_coding MGP_BALBcJ_T0096023.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42558176 42615607 + MGP_BALBcJ_P0096023 Ocrl protein_coding protein_coding MGP_BALBcJ_T0096024.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42558227 42606831 + MGP_BALBcJ_P0096024 Ocrl protein_coding protein_coding MGP_BALBcJ_T0096025.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42558244 42606814 + Ocrl protein_coding processed_transcript MGP_BALBcJ_T0096026.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42558256 42561386 + Ocrl protein_coding retained_intron MGP_BALBcJ_T0096027.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42558772 42615612 + MGP_BALBcJ_P0096027 Ocrl protein_coding protein_coding MGP_BALBcJ_T0096028.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42575901 42577044 + Ocrl protein_coding retained_intron MGP_BALBcJ_T0096029.1 MGP_BALBcJ_G0035654.1 mouse_genomes_project X 42584113 42598212 + MGP_BALBcJ_P0096029 Ocrl protein_coding protein_coding MGP_BALBcJ_T0016516.1 MGP_BALBcJ_G0014613.1 mouse_genomes_project X 96307702 96308559 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100273.1 MGP_BALBcJ_G0038309.1 mouse_genomes_project X 96486257 96486391 + Gm22472 snRNA snRNA MGP_BALBcJ_T0097580.1 MGP_BALBcJ_G0036099.1 mouse_genomes_project X 135244364 135291212 - MGP_BALBcJ_P0097580 Nup62cl protein_coding protein_coding MGP_BALBcJ_T0097581.1 MGP_BALBcJ_G0036099.1 mouse_genomes_project X 135261734 135302151 - MGP_BALBcJ_P0097581 Nup62cl protein_coding protein_coding MGP_BALBcJ_T0097582.1 MGP_BALBcJ_G0036099.1 mouse_genomes_project X 135267281 135302570 - MGP_BALBcJ_P0097582 Nup62cl protein_coding protein_coding MGP_BALBcJ_T0097583.1 MGP_BALBcJ_G0036099.1 mouse_genomes_project X 135267881 135302438 - MGP_BALBcJ_P0097583 Nup62cl protein_coding protein_coding MGP_BALBcJ_T0097584.1 MGP_BALBcJ_G0036099.1 mouse_genomes_project X 135274462 135302409 - MGP_BALBcJ_P0097584 Nup62cl protein_coding protein_coding MGP_BALBcJ_T0016851.1 MGP_BALBcJ_G0014948.1 mouse_genomes_project X 161465623 161466022 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016784.1 MGP_BALBcJ_G0014881.1 mouse_genomes_project X 147721378 147721904 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016595.1 MGP_BALBcJ_G0014692.1 mouse_genomes_project X 107691521 107695222 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096088.1 MGP_BALBcJ_G0035672.1 mouse_genomes_project X 44341735 44342695 - MGP_BALBcJ_P0096088 Olfr1321 protein_coding protein_coding MGP_BALBcJ_T0011191.1 MGP_BALBcJ_G0009316.1 mouse_genomes_project X 140145459 140145530 + Mir3472 miRNA miRNA MGP_BALBcJ_T0097469.1 MGP_BALBcJ_G0036062.1 mouse_genomes_project X 131220148 131233550 - MGP_BALBcJ_P0097469 Nxf3 protein_coding protein_coding MGP_BALBcJ_T0097470.1 MGP_BALBcJ_G0036062.1 mouse_genomes_project X 131227662 131233537 - MGP_BALBcJ_P0097470 Nxf3 protein_coding protein_coding MGP_BALBcJ_T0102846.1 MGP_BALBcJ_G0040661.1 mouse_genomes_project X 7952563 7952701 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005558.1 MGP_BALBcJ_G0004686.1 mouse_genomes_project X 47179088 47226218 + A630012P03Rik antisense antisense MGP_BALBcJ_T0005559.1 MGP_BALBcJ_G0004686.1 mouse_genomes_project X 47179088 47226218 + A630012P03Rik antisense antisense MGP_BALBcJ_T0100247.1 MGP_BALBcJ_G0038283.1 mouse_genomes_project X 34006200 34006305 - Gm26437 snRNA snRNA MGP_BALBcJ_T0097694.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145522700 145567367 - MGP_BALBcJ_P0097694 Tmem29 protein_coding protein_coding MGP_BALBcJ_T0097695.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145522700 145585433 - MGP_BALBcJ_P0097695 Tmem29 protein_coding protein_coding MGP_BALBcJ_T0097696.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145523722 145585433 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097697.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145535862 145585437 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097698.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145535862 145567336 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097699.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145535868 145567135 - MGP_BALBcJ_P0097699 Tmem29 protein_coding protein_coding MGP_BALBcJ_T0097700.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145536204 145585437 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097701.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145536390 145561752 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097702.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145536455 145567135 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097703.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145544246 145585437 - Tmem29 protein_coding retained_intron MGP_BALBcJ_T0097704.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145563378 145567393 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0097705.1 MGP_BALBcJ_G0036134.1 mouse_genomes_project X 145564183 145567019 - Tmem29 protein_coding processed_transcript MGP_BALBcJ_T0016267.1 MGP_BALBcJ_G0014364.1 mouse_genomes_project X 41165455 41165863 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011163.1 MGP_BALBcJ_G0009288.1 mouse_genomes_project X 73980561 73980653 - Gm23556 miRNA miRNA MGP_BALBcJ_T0016485.1 MGP_BALBcJ_G0014582.1 mouse_genomes_project X 89842737 89843063 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016300.1 MGP_BALBcJ_G0014397.1 mouse_genomes_project X 51260600 51260891 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095957.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36121917 36330435 + Gria3 protein_coding retained_intron MGP_BALBcJ_T0095958.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36122956 36392160 + MGP_BALBcJ_P0095958 Gria3 protein_coding protein_coding MGP_BALBcJ_T0095959.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36123085 36394176 + MGP_BALBcJ_P0095959 Gria3 protein_coding protein_coding MGP_BALBcJ_T0095960.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36123179 36392167 + Gria3 protein_coding retained_intron MGP_BALBcJ_T0095961.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36123217 36394173 + MGP_BALBcJ_P0095961 Gria3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095962.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36123263 36330890 + Gria3 protein_coding retained_intron MGP_BALBcJ_T0095963.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36123346 36388045 + MGP_BALBcJ_P0095963 Gria3 protein_coding protein_coding MGP_BALBcJ_T0095964.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36124521 36196755 + MGP_BALBcJ_P0095964 Gria3 protein_coding protein_coding MGP_BALBcJ_T0095965.1 MGP_BALBcJ_G0035641.1 mouse_genomes_project X 36327532 36338598 + Gria3 protein_coding retained_intron MGP_BALBcJ_T0100266.1 MGP_BALBcJ_G0038302.1 mouse_genomes_project X 72631010 72631183 + Gm23121 snRNA snRNA MGP_BALBcJ_T0096822.1 MGP_BALBcJ_G0035869.1 mouse_genomes_project X 87181208 87182895 - MGP_BALBcJ_P0096822 protein_coding protein_coding MGP_BALBcJ_T0097834.1 MGP_BALBcJ_G0036153.1 mouse_genomes_project X 147484665 147509477 - MGP_BALBcJ_P0097834 Gpr173 protein_coding protein_coding MGP_BALBcJ_T0097835.1 MGP_BALBcJ_G0036153.1 mouse_genomes_project X 147507788 147509477 - Gpr173 protein_coding processed_transcript MGP_BALBcJ_T0097780.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146931106 146932739 + Huwe1 protein_coding processed_transcript MGP_BALBcJ_T0097781.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146931359 146934987 + Huwe1 protein_coding processed_transcript MGP_BALBcJ_T0097782.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146931790 146937336 + Huwe1 protein_coding processed_transcript MGP_BALBcJ_T0097783.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933718 147005884 + MGP_BALBcJ_P0097783 Huwe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097784.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933736 146937336 + Huwe1 protein_coding processed_transcript MGP_BALBcJ_T0097785.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933802 146983785 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097786.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933802 147072968 + MGP_BALBcJ_P0097786 Huwe1 protein_coding protein_coding MGP_BALBcJ_T0097787.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933812 147072970 + MGP_BALBcJ_P0097787 Huwe1 protein_coding unknown_likely_coding MGP_BALBcJ_T0097788.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933822 146991123 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097789.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146933822 147006401 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097790.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146934133 146965873 + MGP_BALBcJ_P0097790 Huwe1 protein_coding protein_coding MGP_BALBcJ_T0097791.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146934137 146978172 + Huwe1 protein_coding processed_transcript MGP_BALBcJ_T0097792.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146934137 147005096 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097793.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146934137 146970699 + MGP_BALBcJ_P0097793 Huwe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097794.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146965844 147072968 + MGP_BALBcJ_P0097794 Huwe1 protein_coding protein_coding MGP_BALBcJ_T0097795.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146990743 147024011 + MGP_BALBcJ_P0097795 Huwe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097796.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 146997493 147006755 + MGP_BALBcJ_P0097796 Huwe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097797.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147015434 147016150 + Huwe1 protein_coding processed_transcript MGP_BALBcJ_T0097798.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147037892 147042816 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097799.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147041743 147043288 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097800.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147041743 147043091 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097801.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147054172 147055503 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097802.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147054233 147056624 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0097803.1 MGP_BALBcJ_G0036146.1 mouse_genomes_project X 147057148 147065295 + Huwe1 protein_coding retained_intron MGP_BALBcJ_T0016360.1 MGP_BALBcJ_G0014457.1 mouse_genomes_project X 63449436 63450442 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011121.1 MGP_BALBcJ_G0009246.1 mouse_genomes_project X 47349151 47349216 - Mir106a miRNA miRNA MGP_BALBcJ_T0097024.1 MGP_BALBcJ_G0035923.1 mouse_genomes_project X 96505961 96513519 - MGP_BALBcJ_P0097024 Gm20489 protein_coding protein_coding MGP_BALBcJ_T0101811.1 MGP_BALBcJ_G0039748.1 mouse_genomes_project X 147621209 147623409 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101812.1 MGP_BALBcJ_G0039748.1 mouse_genomes_project X 147621982 147623124 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0016839.1 MGP_BALBcJ_G0014936.1 mouse_genomes_project X 158135658 158136058 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016331.1 MGP_BALBcJ_G0014428.1 mouse_genomes_project X 56768574 56769640 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095503.1 MGP_BALBcJ_G0035495.1 mouse_genomes_project X 2327279 2329905 + MGP_BALBcJ_P0095503 Praf2 protein_coding protein_coding MGP_BALBcJ_T0095931.1 MGP_BALBcJ_G0035632.1 mouse_genomes_project X 32904736 32960889 - MGP_BALBcJ_P0095931 Tmem255a protein_coding protein_coding MGP_BALBcJ_T0095932.1 MGP_BALBcJ_G0035632.1 mouse_genomes_project X 32905469 32960899 - Tmem255a protein_coding retained_intron MGP_BALBcJ_T0095933.1 MGP_BALBcJ_G0035632.1 mouse_genomes_project X 32905469 32960899 - MGP_BALBcJ_P0095933 Tmem255a protein_coding protein_coding MGP_BALBcJ_T0095934.1 MGP_BALBcJ_G0035632.1 mouse_genomes_project X 32905469 32960899 - MGP_BALBcJ_P0095934 Tmem255a protein_coding protein_coding MGP_BALBcJ_T0095935.1 MGP_BALBcJ_G0035632.1 mouse_genomes_project X 32923826 32960861 - Tmem255a protein_coding processed_transcript MGP_BALBcJ_T0096672.1 MGP_BALBcJ_G0035816.1 mouse_genomes_project X 69493030 69495635 - MGP_BALBcJ_P0096672 protein_coding protein_coding MGP_BALBcJ_T0016761.1 MGP_BALBcJ_G0014858.1 mouse_genomes_project X 141137321 141137688 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095861.1 MGP_BALBcJ_G0035596.1 mouse_genomes_project X 31606522 31607094 + Ube2a protein_coding processed_transcript MGP_BALBcJ_T0095862.1 MGP_BALBcJ_G0035596.1 mouse_genomes_project X 31606953 31607990 + Ube2a protein_coding retained_intron MGP_BALBcJ_T0095863.1 MGP_BALBcJ_G0035596.1 mouse_genomes_project X 31606953 31615723 + MGP_BALBcJ_P0095863 Ube2a protein_coding protein_coding MGP_BALBcJ_T0095864.1 MGP_BALBcJ_G0035596.1 mouse_genomes_project X 31606963 31616397 + MGP_BALBcJ_P0095864 Ube2a protein_coding protein_coding MGP_BALBcJ_T0095865.1 MGP_BALBcJ_G0035596.1 mouse_genomes_project X 31607108 31616702 + MGP_BALBcJ_P0095865 Ube2a protein_coding protein_coding MGP_BALBcJ_T0095866.1 MGP_BALBcJ_G0035596.1 mouse_genomes_project X 31613949 31615728 + Ube2a protein_coding retained_intron MGP_BALBcJ_T0016599.1 MGP_BALBcJ_G0014696.1 mouse_genomes_project X 107981783 107983405 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095734.1 MGP_BALBcJ_G0035556.1 mouse_genomes_project X 13168082 13217144 - 4930578C19Rik protein_coding processed_transcript MGP_BALBcJ_T0095735.1 MGP_BALBcJ_G0035556.1 mouse_genomes_project X 13171628 13217118 - MGP_BALBcJ_P0095735 4930578C19Rik protein_coding protein_coding MGP_BALBcJ_T0096004.1 MGP_BALBcJ_G0035647.1 mouse_genomes_project X 37228011 37861470 - MGP_BALBcJ_P0096004 Tenm1 protein_coding protein_coding MGP_BALBcJ_T0096005.1 MGP_BALBcJ_G0035647.1 mouse_genomes_project X 37228011 37861491 - MGP_BALBcJ_P0096005 Tenm1 protein_coding protein_coding MGP_BALBcJ_T0096006.1 MGP_BALBcJ_G0035647.1 mouse_genomes_project X 37232536 37958542 - MGP_BALBcJ_P0096006 Tenm1 protein_coding protein_coding MGP_BALBcJ_T0096007.1 MGP_BALBcJ_G0035647.1 mouse_genomes_project X 37522602 38117555 - Tenm1 protein_coding retained_intron MGP_BALBcJ_T0096008.1 MGP_BALBcJ_G0035647.1 mouse_genomes_project X 37595026 38117678 - Tenm1 protein_coding retained_intron MGP_BALBcJ_T0096009.1 MGP_BALBcJ_G0035647.1 mouse_genomes_project X 38009309 38117555 - Tenm1 protein_coding processed_transcript MGP_BALBcJ_T0102867.1 MGP_BALBcJ_G0040682.1 mouse_genomes_project X 81251447 81252810 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011764.1 MGP_BALBcJ_G0009889.1 mouse_genomes_project X 157922002 157922303 + Gm22257 misc_RNA misc_RNA MGP_BALBcJ_T0098088.1 MGP_BALBcJ_G0036225.1 mouse_genomes_project X 160390941 160598009 - MGP_BALBcJ_P0098088 Glra2 protein_coding protein_coding MGP_BALBcJ_T0016432.1 MGP_BALBcJ_G0014529.1 mouse_genomes_project X 80344915 80345241 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096098.1 MGP_BALBcJ_G0035677.1 mouse_genomes_project X 45456956 45509066 + MGP_BALBcJ_P0096098 Stk26 protein_coding protein_coding MGP_BALBcJ_T0096099.1 MGP_BALBcJ_G0035677.1 mouse_genomes_project X 45457350 45495857 + Stk26 protein_coding retained_intron MGP_BALBcJ_T0096100.1 MGP_BALBcJ_G0035677.1 mouse_genomes_project X 45457350 45509066 + MGP_BALBcJ_P0096100 Stk26 protein_coding protein_coding MGP_BALBcJ_T0096101.1 MGP_BALBcJ_G0035677.1 mouse_genomes_project X 45494170 45507631 + Stk26 protein_coding retained_intron MGP_BALBcJ_T0097253.1 MGP_BALBcJ_G0035990.1 mouse_genomes_project X 104120901 104217080 - MGP_BALBcJ_P0097253 Brwd3 protein_coding protein_coding MGP_BALBcJ_T0097254.1 MGP_BALBcJ_G0035990.1 mouse_genomes_project X 104126452 104217104 - MGP_BALBcJ_P0097254 Brwd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097255.1 MGP_BALBcJ_G0035990.1 mouse_genomes_project X 104126452 104217104 - MGP_BALBcJ_P0097255 Brwd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097256.1 MGP_BALBcJ_G0035990.1 mouse_genomes_project X 104186102 104217072 - Brwd3 protein_coding retained_intron MGP_BALBcJ_T0097257.1 MGP_BALBcJ_G0035990.1 mouse_genomes_project X 104203621 104217078 - MGP_BALBcJ_P0097257 Brwd3 protein_coding protein_coding MGP_BALBcJ_T0002478.1 MGP_BALBcJ_G0002387.1 mouse_genomes_project X 147435679 147437155 - TEC TEC MGP_BALBcJ_T0096046.1 MGP_BALBcJ_G0035660.1 mouse_genomes_project X 43004438 43024890 + Bcorl1 protein_coding processed_transcript MGP_BALBcJ_T0096047.1 MGP_BALBcJ_G0035660.1 mouse_genomes_project X 43007998 43068465 + MGP_BALBcJ_P0096047 Bcorl1 protein_coding protein_coding MGP_BALBcJ_T0096048.1 MGP_BALBcJ_G0035660.1 mouse_genomes_project X 43024003 43041519 + MGP_BALBcJ_P0096048 Bcorl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096049.1 MGP_BALBcJ_G0035660.1 mouse_genomes_project X 43031722 43046348 + MGP_BALBcJ_P0096049 Bcorl1 protein_coding protein_coding MGP_BALBcJ_T0101517.1 MGP_BALBcJ_G0039553.1 mouse_genomes_project X 31817885 31818016 - Snora69 snoRNA snoRNA MGP_BALBcJ_T0098033.1 MGP_BALBcJ_G0036210.1 mouse_genomes_project X 159154312 159179535 + MGP_BALBcJ_P0098033 Ap1s2 protein_coding protein_coding MGP_BALBcJ_T0098034.1 MGP_BALBcJ_G0036210.1 mouse_genomes_project X 159154437 159179228 + MGP_BALBcJ_P0098034 Ap1s2 protein_coding protein_coding MGP_BALBcJ_T0098035.1 MGP_BALBcJ_G0036210.1 mouse_genomes_project X 159154440 159175397 + MGP_BALBcJ_P0098035 Ap1s2 protein_coding protein_coding MGP_BALBcJ_T0098036.1 MGP_BALBcJ_G0036210.1 mouse_genomes_project X 159156696 159179225 + MGP_BALBcJ_P0098036 Ap1s2 protein_coding protein_coding MGP_BALBcJ_T0016627.1 MGP_BALBcJ_G0014724.1 mouse_genomes_project X 112691258 112692247 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096153.1 MGP_BALBcJ_G0035703.1 mouse_genomes_project X 51326936 51330276 + MGP_BALBcJ_P0096153 Smim10l2a protein_coding protein_coding MGP_BALBcJ_T0016482.1 MGP_BALBcJ_G0014579.1 mouse_genomes_project X 89771565 89772172 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016641.1 MGP_BALBcJ_G0014738.1 mouse_genomes_project X 115347377 115347833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095794.1 MGP_BALBcJ_G0035570.1 mouse_genomes_project X 15677468 15683570 - MGP_BALBcJ_P0095794 Cfp protein_coding protein_coding MGP_BALBcJ_T0095795.1 MGP_BALBcJ_G0035570.1 mouse_genomes_project X 15677665 15679629 - Cfp protein_coding processed_transcript MGP_BALBcJ_T0097015.1 MGP_BALBcJ_G0035920.1 mouse_genomes_project X 96343290 96466272 - MGP_BALBcJ_P0097015 Snx12 protein_coding protein_coding MGP_BALBcJ_T0097016.1 MGP_BALBcJ_G0035920.1 mouse_genomes_project X 96455709 96466282 - MGP_BALBcJ_P0097016 Snx12 protein_coding protein_coding MGP_BALBcJ_T0097017.1 MGP_BALBcJ_G0035920.1 mouse_genomes_project X 96455709 96466268 - MGP_BALBcJ_P0097017 Snx12 protein_coding protein_coding MGP_BALBcJ_T0097018.1 MGP_BALBcJ_G0035920.1 mouse_genomes_project X 96457221 96458274 - Snx12 protein_coding processed_transcript MGP_BALBcJ_T0016468.1 MGP_BALBcJ_G0014565.1 mouse_genomes_project X 87038309 87040563 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016622.1 MGP_BALBcJ_G0014719.1 mouse_genomes_project X 111930365 111930668 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009365.1 MGP_BALBcJ_G0007515.1 mouse_genomes_project X 62453449 62456771 + lincRNA lincRNA MGP_BALBcJ_T0016247.1 MGP_BALBcJ_G0014344.1 mouse_genomes_project X 36452700 36454007 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016253.1 MGP_BALBcJ_G0014350.1 mouse_genomes_project X 38097664 38098322 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016736.1 MGP_BALBcJ_G0014833.1 mouse_genomes_project X 137540006 137540497 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011100.1 MGP_BALBcJ_G0009225.1 mouse_genomes_project X 10487878 10487942 + Gm22464 miRNA miRNA MGP_BALBcJ_T0095632.1 MGP_BALBcJ_G0035521.1 mouse_genomes_project X 3612288 3614871 + MGP_BALBcJ_P0095632 B630019K06Rik protein_coding protein_coding MGP_BALBcJ_T0016592.1 MGP_BALBcJ_G0014689.1 mouse_genomes_project X 107108841 107109390 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005544.1 MGP_BALBcJ_G0004677.1 mouse_genomes_project X 2244145 2248336 - Gm14703 antisense antisense MGP_BALBcJ_T0016189.1 MGP_BALBcJ_G0014286.1 mouse_genomes_project X 11372632 11375227 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095867.1 MGP_BALBcJ_G0035597.1 mouse_genomes_project X 31620012 31635377 - MGP_BALBcJ_P0095867 Nkrf protein_coding protein_coding MGP_BALBcJ_T0096767.1 MGP_BALBcJ_G0035847.1 mouse_genomes_project X 74333057 74590316 - MGP_BALBcJ_P0096767 Gm7173 protein_coding protein_coding MGP_BALBcJ_T0096768.1 MGP_BALBcJ_G0035847.1 mouse_genomes_project X 74399607 74418966 - Gm7173 protein_coding retained_intron MGP_BALBcJ_T0096769.1 MGP_BALBcJ_G0035847.1 mouse_genomes_project X 74399805 74427230 - MGP_BALBcJ_P0096769 Gm7173 protein_coding protein_coding MGP_BALBcJ_T0096770.1 MGP_BALBcJ_G0035847.1 mouse_genomes_project X 74418959 74427861 - Gm7173 protein_coding processed_transcript MGP_BALBcJ_T0096771.1 MGP_BALBcJ_G0035847.1 mouse_genomes_project X 74470689 74502959 - MGP_BALBcJ_P0096771 Gm7173 protein_coding protein_coding MGP_BALBcJ_T0096772.1 MGP_BALBcJ_G0035847.1 mouse_genomes_project X 74555479 74590316 - MGP_BALBcJ_P0096772 Gm7173 protein_coding protein_coding MGP_BALBcJ_T0016456.1 MGP_BALBcJ_G0014553.1 mouse_genomes_project X 84828021 84831623 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097490.1 MGP_BALBcJ_G0036073.1 mouse_genomes_project X 131940128 131948595 - MGP_BALBcJ_P0097490 protein_coding protein_coding MGP_BALBcJ_T0097491.1 MGP_BALBcJ_G0036073.1 mouse_genomes_project X 131941567 131950183 - MGP_BALBcJ_P0097491 protein_coding protein_coding MGP_BALBcJ_T0097492.1 MGP_BALBcJ_G0036073.1 mouse_genomes_project X 131941593 131947781 - MGP_BALBcJ_P0097492 protein_coding protein_coding MGP_BALBcJ_T0097493.1 MGP_BALBcJ_G0036073.1 mouse_genomes_project X 131941595 131950212 - MGP_BALBcJ_P0097493 protein_coding protein_coding MGP_BALBcJ_T0097494.1 MGP_BALBcJ_G0036073.1 mouse_genomes_project X 131941723 131947777 - MGP_BALBcJ_P0097494 protein_coding protein_coding MGP_BALBcJ_T0097495.1 MGP_BALBcJ_G0036073.1 mouse_genomes_project X 131942891 131948570 - protein_coding processed_transcript MGP_BALBcJ_T0011749.1 MGP_BALBcJ_G0009874.1 mouse_genomes_project X 98991252 98991379 + Gm27285 misc_RNA misc_RNA MGP_BALBcJ_T0018636.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131949117 131965549 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0018637.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131949139 131967248 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0018638.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131949151 131952623 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0018639.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131949181 131965527 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0018640.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131950269 132010336 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0018641.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131951434 131965564 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0018642.1 MGP_BALBcJ_G0015732.1 mouse_genomes_project X 131972974 132010345 + BC065397 processed_transcript processed_transcript MGP_BALBcJ_T0095928.1 MGP_BALBcJ_G0035631.1 mouse_genomes_project X 32897968 32905210 + MGP_BALBcJ_P0095928 Zbtb33 protein_coding protein_coding MGP_BALBcJ_T0095929.1 MGP_BALBcJ_G0035631.1 mouse_genomes_project X 32897987 32902860 + MGP_BALBcJ_P0095929 Zbtb33 protein_coding protein_coding MGP_BALBcJ_T0095930.1 MGP_BALBcJ_G0035631.1 mouse_genomes_project X 32898009 32902244 + MGP_BALBcJ_P0095930 Zbtb33 protein_coding protein_coding MGP_BALBcJ_T0016597.1 MGP_BALBcJ_G0014694.1 mouse_genomes_project X 107873709 107874617 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016563.1 MGP_BALBcJ_G0014660.1 mouse_genomes_project X 101101049 101101890 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016525.1 MGP_BALBcJ_G0014622.1 mouse_genomes_project X 97455808 97456272 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016848.1 MGP_BALBcJ_G0014945.1 mouse_genomes_project X 160947247 160947626 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016288.1 MGP_BALBcJ_G0014385.1 mouse_genomes_project X 47389211 47389534 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097405.1 MGP_BALBcJ_G0036045.1 mouse_genomes_project X 129628037 129630440 + MGP_BALBcJ_P0097405 Rpl36a protein_coding protein_coding MGP_BALBcJ_T0097406.1 MGP_BALBcJ_G0036045.1 mouse_genomes_project X 129628072 129630446 + Rpl36a protein_coding retained_intron MGP_BALBcJ_T0097407.1 MGP_BALBcJ_G0036045.1 mouse_genomes_project X 129628073 129630446 + MGP_BALBcJ_P0097407 Rpl36a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097408.1 MGP_BALBcJ_G0036045.1 mouse_genomes_project X 129628084 129630417 + Rpl36a protein_coding retained_intron MGP_BALBcJ_T0097409.1 MGP_BALBcJ_G0036045.1 mouse_genomes_project X 129628473 129629400 + Rpl36a protein_coding retained_intron MGP_BALBcJ_T0097410.1 MGP_BALBcJ_G0036045.1 mouse_genomes_project X 129629464 129630380 + Rpl36a protein_coding retained_intron MGP_BALBcJ_T0016811.1 MGP_BALBcJ_G0014908.1 mouse_genomes_project X 152930640 152930974 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096250.1 MGP_BALBcJ_G0035736.1 mouse_genomes_project X 60107756 60111999 + MGP_BALBcJ_P0096250 Ctag2 protein_coding protein_coding MGP_BALBcJ_T0096625.1 MGP_BALBcJ_G0035809.1 mouse_genomes_project X 69362366 69364685 - MGP_BALBcJ_P0096625 Lage3 protein_coding protein_coding MGP_BALBcJ_T0096626.1 MGP_BALBcJ_G0035809.1 mouse_genomes_project X 69363251 69364709 - MGP_BALBcJ_P0096626 Lage3 protein_coding protein_coding MGP_BALBcJ_T0096627.1 MGP_BALBcJ_G0035809.1 mouse_genomes_project X 69363252 69364666 - MGP_BALBcJ_P0096627 Lage3 protein_coding protein_coding MGP_BALBcJ_T0016567.1 MGP_BALBcJ_G0014664.1 mouse_genomes_project X 102053111 102053984 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098115.1 MGP_BALBcJ_G0036233.1 mouse_genomes_project X 162469463 162471685 - MGP_BALBcJ_P0098115 Tmsb4x protein_coding protein_coding MGP_BALBcJ_T0098116.1 MGP_BALBcJ_G0036233.1 mouse_genomes_project X 162469465 162471519 - MGP_BALBcJ_P0098116 Tmsb4x protein_coding protein_coding MGP_BALBcJ_T0098117.1 MGP_BALBcJ_G0036233.1 mouse_genomes_project X 162469662 162471197 - MGP_BALBcJ_P0098117 Tmsb4x protein_coding protein_coding MGP_BALBcJ_T0097585.1 MGP_BALBcJ_G0036100.1 mouse_genomes_project X 135302736 135346649 + MGP_BALBcJ_P0097585 Pih1h3b protein_coding protein_coding MGP_BALBcJ_T0101546.1 MGP_BALBcJ_G0039582.1 mouse_genomes_project X 116717366 116717502 + Gm23277 snoRNA snoRNA MGP_BALBcJ_T0016626.1 MGP_BALBcJ_G0014723.1 mouse_genomes_project X 112545365 112547051 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009408.1 MGP_BALBcJ_G0007543.1 mouse_genomes_project X 146311660 146313705 + Gm15138 lincRNA lincRNA MGP_BALBcJ_T0097448.1 MGP_BALBcJ_G0036054.1 mouse_genomes_project X 130747819 130762953 - MGP_BALBcJ_P0097448 Prame protein_coding protein_coding MGP_BALBcJ_T0097449.1 MGP_BALBcJ_G0036054.1 mouse_genomes_project X 130747961 130750623 - MGP_BALBcJ_P0097449 Prame protein_coding protein_coding MGP_BALBcJ_T0095633.1 MGP_BALBcJ_G0035522.1 mouse_genomes_project X 3839957 3841738 + MGP_BALBcJ_P0095633 4930402K13Rik protein_coding protein_coding MGP_BALBcJ_T0011137.1 MGP_BALBcJ_G0009262.1 mouse_genomes_project X 61823806 61823882 - Mir883a miRNA miRNA MGP_BALBcJ_T0096774.1 MGP_BALBcJ_G0035849.1 mouse_genomes_project X 76012540 76036641 + Tmem47 protein_coding processed_transcript MGP_BALBcJ_T0096775.1 MGP_BALBcJ_G0035849.1 mouse_genomes_project X 76012547 76037596 + MGP_BALBcJ_P0096775 Tmem47 protein_coding protein_coding MGP_BALBcJ_T0096776.1 MGP_BALBcJ_G0035849.1 mouse_genomes_project X 76012558 76039746 + MGP_BALBcJ_P0096776 Tmem47 protein_coding protein_coding MGP_BALBcJ_T0011133.1 MGP_BALBcJ_G0009258.1 mouse_genomes_project X 56087181 56087274 + Gm24396 miRNA miRNA MGP_BALBcJ_T0097088.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97123410 97223812 + Nhsl2 protein_coding processed_transcript MGP_BALBcJ_T0097089.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97123410 97349667 + MGP_BALBcJ_P0097089 Nhsl2 protein_coding protein_coding MGP_BALBcJ_T0097090.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97123410 97365412 + MGP_BALBcJ_P0097090 Nhsl2 protein_coding protein_coding MGP_BALBcJ_T0097091.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97235973 97351272 + Nhsl2 protein_coding processed_transcript MGP_BALBcJ_T0097092.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97278372 97351247 + MGP_BALBcJ_P0097092 Nhsl2 protein_coding protein_coding MGP_BALBcJ_T0097093.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97324585 97345357 + Nhsl2 protein_coding processed_transcript MGP_BALBcJ_T0097097.1 MGP_BALBcJ_G0035935.1 mouse_genomes_project X 97346332 97353691 + Nhsl2 protein_coding processed_transcript MGP_BALBcJ_T0098157.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165212569 165276387 + MGP_BALBcJ_P0098157 Mid1 protein_coding protein_coding MGP_BALBcJ_T0098158.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165213093 165261188 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098159.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165258813 165268366 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098160.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165258813 165268366 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098161.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165261187 165268366 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098162.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165261187 165268367 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098163.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165261187 165268366 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098164.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165261187 165268366 + Mid1 protein_coding processed_transcript MGP_BALBcJ_T0098165.1 MGP_BALBcJ_G0036243.1 mouse_genomes_project X 165262862 165270436 + MGP_BALBcJ_P0098165 Mid1 protein_coding unknown_likely_coding MGP_BALBcJ_T0097197.1 MGP_BALBcJ_G0035971.1 mouse_genomes_project X 101422063 101521054 + MGP_BALBcJ_P0097197 Atp7a protein_coding protein_coding MGP_BALBcJ_T0097198.1 MGP_BALBcJ_G0035971.1 mouse_genomes_project X 101422109 101521060 + MGP_BALBcJ_P0097198 Atp7a protein_coding protein_coding MGP_BALBcJ_T0097199.1 MGP_BALBcJ_G0035971.1 mouse_genomes_project X 101502824 101514191 + Atp7a protein_coding processed_transcript MGP_BALBcJ_T0097200.1 MGP_BALBcJ_G0035971.1 mouse_genomes_project X 101511119 101518539 + Atp7a protein_coding retained_intron MGP_BALBcJ_T0096522.1 MGP_BALBcJ_G0035797.1 mouse_genomes_project X 69131606 69156677 + MGP_BALBcJ_P0096522 Opn1mw protein_coding protein_coding MGP_BALBcJ_T0096523.1 MGP_BALBcJ_G0035797.1 mouse_genomes_project X 69131608 69156668 + MGP_BALBcJ_P0096523 Opn1mw protein_coding protein_coding MGP_BALBcJ_T0096524.1 MGP_BALBcJ_G0035797.1 mouse_genomes_project X 69131623 69149470 + Opn1mw protein_coding processed_transcript MGP_BALBcJ_T0096525.1 MGP_BALBcJ_G0035797.1 mouse_genomes_project X 69143514 69156673 + Opn1mw protein_coding processed_transcript MGP_BALBcJ_T0096526.1 MGP_BALBcJ_G0035797.1 mouse_genomes_project X 69143535 69145478 + Opn1mw protein_coding processed_transcript MGP_BALBcJ_T0096527.1 MGP_BALBcJ_G0035797.1 mouse_genomes_project X 69144032 69156673 + MGP_BALBcJ_P0096527 Opn1mw protein_coding protein_coding MGP_BALBcJ_T0016242.1 MGP_BALBcJ_G0014339.1 mouse_genomes_project X 35403277 35403837 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016739.1 MGP_BALBcJ_G0014836.1 mouse_genomes_project X 137667235 137667667 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016250.1 MGP_BALBcJ_G0014347.1 mouse_genomes_project X 36840994 36843728 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011199.1 MGP_BALBcJ_G0009324.1 mouse_genomes_project X 145682001 145682062 - Mir3620 miRNA miRNA MGP_BALBcJ_T0016327.1 MGP_BALBcJ_G0014424.1 mouse_genomes_project X 56411819 56412662 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016426.1 MGP_BALBcJ_G0014523.1 mouse_genomes_project X 77566142 77566944 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095434.1 MGP_BALBcJ_G0035479.1 mouse_genomes_project X 1037783 1267487 + MGP_BALBcJ_P0095434 Shroom4 protein_coding protein_coding MGP_BALBcJ_T0095435.1 MGP_BALBcJ_G0035479.1 mouse_genomes_project X 1053078 1218200 + MGP_BALBcJ_P0095435 Shroom4 protein_coding protein_coding MGP_BALBcJ_T0095430.1 MGP_BALBcJ_G0035476.1 mouse_genomes_project X 697031 699232 - MGP_BALBcJ_P0095430 AU022751 protein_coding protein_coding MGP_BALBcJ_T0095431.1 MGP_BALBcJ_G0035476.1 mouse_genomes_project X 697031 699232 - MGP_BALBcJ_P0095431 AU022751 protein_coding protein_coding MGP_BALBcJ_T0016523.1 MGP_BALBcJ_G0014620.1 mouse_genomes_project X 97058498 97059378 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016515.1 MGP_BALBcJ_G0014612.1 mouse_genomes_project X 96303951 96304234 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016661.1 MGP_BALBcJ_G0014758.1 mouse_genomes_project X 124572251 124572574 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097611.1 MGP_BALBcJ_G0036110.1 mouse_genomes_project X 136299040 136622455 - MGP_BALBcJ_P0097611 Col4a6 protein_coding protein_coding MGP_BALBcJ_T0097612.1 MGP_BALBcJ_G0036110.1 mouse_genomes_project X 136319819 136341254 - Col4a6 protein_coding processed_transcript MGP_BALBcJ_T0097613.1 MGP_BALBcJ_G0036110.1 mouse_genomes_project X 136323397 136326278 - Col4a6 protein_coding retained_intron MGP_BALBcJ_T0016198.1 MGP_BALBcJ_G0014295.1 mouse_genomes_project X 14090005 14090501 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097489.1 MGP_BALBcJ_G0036072.1 mouse_genomes_project X 131913848 131917345 + MGP_BALBcJ_P0097489 Tceal1 protein_coding protein_coding MGP_BALBcJ_T0011190.1 MGP_BALBcJ_G0009315.1 mouse_genomes_project X 138952669 138952800 - miRNA miRNA MGP_BALBcJ_T0016235.1 MGP_BALBcJ_G0014332.1 mouse_genomes_project X 34186851 34187258 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097317.1 MGP_BALBcJ_G0036013.1 mouse_genomes_project X 111251937 111252284 + MGP_BALBcJ_P0097317 protein_coding protein_coding MGP_BALBcJ_T0096216.1 MGP_BALBcJ_G0035722.1 mouse_genomes_project X 53848743 53855519 + MGP_BALBcJ_P0096216 4930550L24Rik protein_coding protein_coding MGP_BALBcJ_T0096217.1 MGP_BALBcJ_G0035722.1 mouse_genomes_project X 53850844 53855519 + MGP_BALBcJ_P0096217 4930550L24Rik protein_coding protein_coding MGP_BALBcJ_T0016323.1 MGP_BALBcJ_G0014420.1 mouse_genomes_project X 55852079 55852535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016585.1 MGP_BALBcJ_G0014682.1 mouse_genomes_project X 104515799 104516683 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016157.1 MGP_BALBcJ_G0014254.1 mouse_genomes_project X 3660105 3660699 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011186.1 MGP_BALBcJ_G0009311.1 mouse_genomes_project X 131335401 131335517 + Mir6383 miRNA miRNA MGP_BALBcJ_T0095636.1 MGP_BALBcJ_G0035525.1 mouse_genomes_project X 4009839 4061906 + MGP_BALBcJ_P0095636 protein_coding protein_coding MGP_BALBcJ_T0016697.1 MGP_BALBcJ_G0014794.1 mouse_genomes_project X 132338867 132339812 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098058.1 MGP_BALBcJ_G0036217.1 mouse_genomes_project X 159527205 159626427 + MGP_BALBcJ_P0098058 Pir protein_coding protein_coding MGP_BALBcJ_T0098059.1 MGP_BALBcJ_G0036217.1 mouse_genomes_project X 159527265 159630333 + MGP_BALBcJ_P0098059 Pir protein_coding protein_coding MGP_BALBcJ_T0098060.1 MGP_BALBcJ_G0036217.1 mouse_genomes_project X 159527345 159529709 + Pir protein_coding retained_intron MGP_BALBcJ_T0098061.1 MGP_BALBcJ_G0036217.1 mouse_genomes_project X 159527381 159606274 + Pir protein_coding retained_intron MGP_BALBcJ_T0098062.1 MGP_BALBcJ_G0036217.1 mouse_genomes_project X 159527407 159571671 + Pir protein_coding processed_transcript MGP_BALBcJ_T0011738.1 MGP_BALBcJ_G0009863.1 mouse_genomes_project X 63632061 63632117 + Gm27979 misc_RNA misc_RNA MGP_BALBcJ_T0097996.1 MGP_BALBcJ_G0036201.1 mouse_genomes_project X 157068453 157400521 - MGP_BALBcJ_P0097996 Nhs protein_coding protein_coding MGP_BALBcJ_T0097997.1 MGP_BALBcJ_G0036201.1 mouse_genomes_project X 157072358 157400179 - MGP_BALBcJ_P0097997 Nhs protein_coding protein_coding MGP_BALBcJ_T0018571.1 MGP_BALBcJ_G0015712.1 mouse_genomes_project X 13854746 13864994 - Gm14636 processed_transcript processed_transcript MGP_BALBcJ_T0018572.1 MGP_BALBcJ_G0015712.1 mouse_genomes_project X 13859815 13865003 - Gm14636 processed_transcript processed_transcript MGP_BALBcJ_T0011201.1 MGP_BALBcJ_G0009326.1 mouse_genomes_project X 147045233 147045316 + Mirlet7f-2 miRNA miRNA MGP_BALBcJ_T0097231.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102675334 102717567 + MGP_BALBcJ_P0097231 Gpr174 protein_coding protein_coding MGP_BALBcJ_T0097232.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102675365 102718162 + MGP_BALBcJ_P0097232 Gpr174 protein_coding protein_coding MGP_BALBcJ_T0097233.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102675422 102716702 + MGP_BALBcJ_P0097233 Gpr174 protein_coding protein_coding MGP_BALBcJ_T0097234.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102675738 102716714 + MGP_BALBcJ_P0097234 Gpr174 protein_coding protein_coding MGP_BALBcJ_T0097235.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102688201 102713717 + Gpr174 protein_coding processed_transcript MGP_BALBcJ_T0097236.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102705756 102713848 + Gpr174 protein_coding processed_transcript MGP_BALBcJ_T0097237.1 MGP_BALBcJ_G0035983.1 mouse_genomes_project X 102705756 102718164 + MGP_BALBcJ_P0097237 Gpr174 protein_coding protein_coding MGP_BALBcJ_T0096339.1 MGP_BALBcJ_G0035761.1 mouse_genomes_project X 67155967 67156915 + MGP_BALBcJ_P0096339 Magea4 protein_coding protein_coding MGP_BALBcJ_T0005571.1 MGP_BALBcJ_G0004697.1 mouse_genomes_project X 71367374 71367954 - Gm14707 antisense antisense MGP_BALBcJ_T0096245.1 MGP_BALBcJ_G0035734.1 mouse_genomes_project X 59214155 59219386 + MGP_BALBcJ_P0096245 3830417A13Rik protein_coding protein_coding MGP_BALBcJ_T0096246.1 MGP_BALBcJ_G0035734.1 mouse_genomes_project X 59214955 59218115 + MGP_BALBcJ_P0096246 3830417A13Rik protein_coding protein_coding MGP_BALBcJ_T0096318.1 MGP_BALBcJ_G0035754.1 mouse_genomes_project X 66530495 66534784 + MGP_BALBcJ_P0096318 Hmgb3 protein_coding unknown_likely_coding MGP_BALBcJ_T0096319.1 MGP_BALBcJ_G0035754.1 mouse_genomes_project X 66531934 66534429 + MGP_BALBcJ_P0096319 Hmgb3 protein_coding protein_coding MGP_BALBcJ_T0096320.1 MGP_BALBcJ_G0035754.1 mouse_genomes_project X 66532762 66534252 + Hmgb3 protein_coding retained_intron MGP_BALBcJ_T0101528.1 MGP_BALBcJ_G0039564.1 mouse_genomes_project X 69281196 69281333 + Snora70 snoRNA snoRNA MGP_BALBcJ_T0016489.1 MGP_BALBcJ_G0014586.1 mouse_genomes_project X 90021023 90021653 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016856.1 MGP_BALBcJ_G0014953.1 mouse_genomes_project X 162700946 162701489 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096066.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293454 43301075 + Slc25a14 protein_coding processed_transcript MGP_BALBcJ_T0096067.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293619 43333594 + MGP_BALBcJ_P0096067 Slc25a14 protein_coding protein_coding MGP_BALBcJ_T0096068.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293619 43333594 + MGP_BALBcJ_P0096068 Slc25a14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096069.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293619 43333594 + MGP_BALBcJ_P0096069 Slc25a14 protein_coding protein_coding MGP_BALBcJ_T0096070.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293790 43323615 + Slc25a14 protein_coding processed_transcript MGP_BALBcJ_T0096071.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293806 43333594 + MGP_BALBcJ_P0096071 Slc25a14 protein_coding protein_coding MGP_BALBcJ_T0096072.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43293861 43306049 + Slc25a14 protein_coding retained_intron MGP_BALBcJ_T0096073.1 MGP_BALBcJ_G0035665.1 mouse_genomes_project X 43294003 43333592 + MGP_BALBcJ_P0096073 Slc25a14 protein_coding protein_coding MGP_BALBcJ_T0101529.1 MGP_BALBcJ_G0039565.1 mouse_genomes_project X 69625978 69626113 + Gm26417 snoRNA snoRNA MGP_BALBcJ_T0016569.1 MGP_BALBcJ_G0014666.1 mouse_genomes_project X 102074439 102074946 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011761.1 MGP_BALBcJ_G0009886.1 mouse_genomes_project X 139947073 139947395 + Gm26024 misc_RNA misc_RNA MGP_BALBcJ_T0011111.1 MGP_BALBcJ_G0009236.1 mouse_genomes_project X 36662501 36662628 + Gm44490 miRNA miRNA MGP_BALBcJ_T0096635.1 MGP_BALBcJ_G0035811.1 mouse_genomes_project X 69380866 69382661 - MGP_BALBcJ_P0096635 Slc10a3 protein_coding protein_coding MGP_BALBcJ_T0096636.1 MGP_BALBcJ_G0035811.1 mouse_genomes_project X 69380866 69384894 - MGP_BALBcJ_P0096636 Slc10a3 protein_coding protein_coding MGP_BALBcJ_T0096637.1 MGP_BALBcJ_G0035811.1 mouse_genomes_project X 69380866 69384953 - MGP_BALBcJ_P0096637 Slc10a3 protein_coding protein_coding MGP_BALBcJ_T0096638.1 MGP_BALBcJ_G0035811.1 mouse_genomes_project X 69380866 69384997 - MGP_BALBcJ_P0096638 Slc10a3 protein_coding protein_coding MGP_BALBcJ_T0016475.1 MGP_BALBcJ_G0014572.1 mouse_genomes_project X 89147027 89149010 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011157.1 MGP_BALBcJ_G0009282.1 mouse_genomes_project X 67528955 67529035 - Mir105 miRNA miRNA MGP_BALBcJ_T0011098.1 MGP_BALBcJ_G0009223.1 mouse_genomes_project X 7650781 7650875 - Gm25063 miRNA miRNA MGP_BALBcJ_T0096639.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69397720 69406495 - MGP_BALBcJ_P0096639 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096640.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69397762 69406326 - MGP_BALBcJ_P0096640 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096641.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69397762 69406226 - MGP_BALBcJ_P0096641 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096642.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69398205 69406405 - MGP_BALBcJ_P0096642 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096643.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69398303 69406326 - MGP_BALBcJ_P0096643 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096644.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69399423 69406478 - MGP_BALBcJ_P0096644 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096645.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69399633 69406326 - MGP_BALBcJ_P0096645 Fam3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096646.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69399857 69400757 - Fam3a protein_coding retained_intron MGP_BALBcJ_T0096647.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69399913 69405910 - MGP_BALBcJ_P0096647 Fam3a protein_coding protein_coding MGP_BALBcJ_T0096648.1 MGP_BALBcJ_G0035812.1 mouse_genomes_project X 69399913 69405973 - MGP_BALBcJ_P0096648 Fam3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009417.1 MGP_BALBcJ_G0007546.1 mouse_genomes_project X 157053257 157055111 - Scml1 lincRNA lincRNA MGP_BALBcJ_T0095956.1 MGP_BALBcJ_G0035640.1 mouse_genomes_project X 34593183 34593974 - MGP_BALBcJ_P0095956 Cypt14 protein_coding protein_coding MGP_BALBcJ_T0098684.1 MGP_BALBcJ_G0036738.1 mouse_genomes_project X 722706 722825 + n-R5s2 rRNA rRNA MGP_BALBcJ_T0016185.1 MGP_BALBcJ_G0014282.1 mouse_genomes_project X 10312655 10313197 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098114.1 MGP_BALBcJ_G0036232.1 mouse_genomes_project X 161794201 161857553 - MGP_BALBcJ_P0098114 Egfl6 protein_coding protein_coding MGP_BALBcJ_T0016465.1 MGP_BALBcJ_G0014562.1 mouse_genomes_project X 86689600 86690549 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102852.1 MGP_BALBcJ_G0040667.1 mouse_genomes_project X 32793869 32794102 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016538.1 MGP_BALBcJ_G0014635.1 mouse_genomes_project X 98671238 98672370 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016222.1 MGP_BALBcJ_G0014319.1 mouse_genomes_project X 30943827 30944433 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097362.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129078205 129105027 + MGP_BALBcJ_P0097362 Cstf2 protein_coding protein_coding MGP_BALBcJ_T0097363.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129078215 129105800 + MGP_BALBcJ_P0097363 Cstf2 protein_coding protein_coding MGP_BALBcJ_T0097364.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129078233 129094854 + MGP_BALBcJ_P0097364 Cstf2 protein_coding protein_coding MGP_BALBcJ_T0097365.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129078329 129080505 + Cstf2 protein_coding processed_transcript MGP_BALBcJ_T0097366.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129078352 129105800 + Cstf2 protein_coding retained_intron MGP_BALBcJ_T0097367.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129078352 129081642 + MGP_BALBcJ_P0097367 Cstf2 protein_coding protein_coding MGP_BALBcJ_T0097368.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129081405 129093264 + MGP_BALBcJ_P0097368 Cstf2 protein_coding protein_coding MGP_BALBcJ_T0097369.1 MGP_BALBcJ_G0036033.1 mouse_genomes_project X 129085269 129093301 + MGP_BALBcJ_P0097369 Cstf2 protein_coding protein_coding MGP_BALBcJ_T0011193.1 MGP_BALBcJ_G0009318.1 mouse_genomes_project X 142110016 142110124 + Mir764 miRNA miRNA MGP_BALBcJ_T0016481.1 MGP_BALBcJ_G0014578.1 mouse_genomes_project X 89634208 89634826 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100257.1 MGP_BALBcJ_G0038293.1 mouse_genomes_project X 53302249 53302356 - Gm25851 snRNA snRNA MGP_BALBcJ_T0005573.1 MGP_BALBcJ_G0004699.1 mouse_genomes_project X 89197152 89291139 + Gm14798 antisense antisense MGP_BALBcJ_T0016136.1 MGP_BALBcJ_G0014233.1 mouse_genomes_project X 194442 196665 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096715.1 MGP_BALBcJ_G0035827.1 mouse_genomes_project X 70461999 70473698 - MGP_BALBcJ_P0096715 Cmc4 protein_coding protein_coding MGP_BALBcJ_T0096716.1 MGP_BALBcJ_G0035827.1 mouse_genomes_project X 70462179 70473717 - MGP_BALBcJ_P0096716 Cmc4 protein_coding protein_coding MGP_BALBcJ_T0096717.1 MGP_BALBcJ_G0035827.1 mouse_genomes_project X 70462223 70467065 - MGP_BALBcJ_P0096717 Cmc4 protein_coding protein_coding MGP_BALBcJ_T0016347.1 MGP_BALBcJ_G0014444.1 mouse_genomes_project X 60130385 60130635 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096364.1 MGP_BALBcJ_G0035774.1 mouse_genomes_project X 68409007 68424890 + MGP_BALBcJ_P0096364 Zfp92 protein_coding protein_coding MGP_BALBcJ_T0096365.1 MGP_BALBcJ_G0035774.1 mouse_genomes_project X 68409471 68426277 + MGP_BALBcJ_P0096365 Zfp92 protein_coding protein_coding MGP_BALBcJ_T0102853.1 MGP_BALBcJ_G0040668.1 mouse_genomes_project X 33100684 33102366 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016232.1 MGP_BALBcJ_G0014329.1 mouse_genomes_project X 33831534 33832481 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100274.1 MGP_BALBcJ_G0038310.1 mouse_genomes_project X 97186688 97186783 - Gm25828 snRNA snRNA MGP_BALBcJ_T0097619.1 MGP_BALBcJ_G0036113.1 mouse_genomes_project X 137002448 137003653 - MGP_BALBcJ_P0097619 protein_coding protein_coding MGP_BALBcJ_T0098700.1 MGP_BALBcJ_G0036754.1 mouse_genomes_project X 147444628 147444739 + n-R5s15 rRNA rRNA MGP_BALBcJ_T0016464.1 MGP_BALBcJ_G0014561.1 mouse_genomes_project X 86687707 86688095 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016862.1 MGP_BALBcJ_G0014959.1 mouse_genomes_project X 164073731 164074131 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018573.1 MGP_BALBcJ_G0015713.1 mouse_genomes_project X 15713697 15743096 + A230072C01Rik processed_transcript processed_transcript MGP_BALBcJ_T0018574.1 MGP_BALBcJ_G0015713.1 mouse_genomes_project X 15714127 15743110 + A230072C01Rik processed_transcript processed_transcript MGP_BALBcJ_T0097389.1 MGP_BALBcJ_G0036040.1 mouse_genomes_project X 129433023 129481672 + MGP_BALBcJ_P0097389 Drp2 protein_coding protein_coding MGP_BALBcJ_T0097390.1 MGP_BALBcJ_G0036040.1 mouse_genomes_project X 129433097 129485537 + MGP_BALBcJ_P0097390 Drp2 protein_coding protein_coding MGP_BALBcJ_T0097391.1 MGP_BALBcJ_G0036040.1 mouse_genomes_project X 129433097 129482580 + MGP_BALBcJ_P0097391 Drp2 protein_coding protein_coding MGP_BALBcJ_T0097392.1 MGP_BALBcJ_G0036040.1 mouse_genomes_project X 129433109 129481979 + MGP_BALBcJ_P0097392 Drp2 protein_coding protein_coding MGP_BALBcJ_T0097393.1 MGP_BALBcJ_G0036040.1 mouse_genomes_project X 129451742 129464185 + Drp2 protein_coding processed_transcript MGP_BALBcJ_T0097394.1 MGP_BALBcJ_G0036040.1 mouse_genomes_project X 129451796 129482372 + Drp2 protein_coding retained_intron MGP_BALBcJ_T0016285.1 MGP_BALBcJ_G0014382.1 mouse_genomes_project X 45874315 45875004 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096370.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68481058 68490702 + Bgn protein_coding processed_transcript MGP_BALBcJ_T0096371.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68481058 68493898 + MGP_BALBcJ_P0096371 Bgn protein_coding protein_coding MGP_BALBcJ_T0096372.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68481079 68490354 + Bgn protein_coding retained_intron MGP_BALBcJ_T0096373.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68481089 68483754 + Bgn protein_coding retained_intron MGP_BALBcJ_T0096374.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68481091 68493894 + MGP_BALBcJ_P0096374 Bgn protein_coding protein_coding MGP_BALBcJ_T0096375.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68481095 68490338 + Bgn protein_coding retained_intron MGP_BALBcJ_T0096376.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68490012 68491266 + Bgn protein_coding processed_transcript MGP_BALBcJ_T0096377.1 MGP_BALBcJ_G0035777.1 mouse_genomes_project X 68492866 68493891 + Bgn protein_coding processed_transcript MGP_BALBcJ_T0016701.1 MGP_BALBcJ_G0014798.1 mouse_genomes_project X 132372026 132374560 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097141.1 MGP_BALBcJ_G0035955.1 mouse_genomes_project X 98794655 98804346 + MGP_BALBcJ_P0097141 Tsx protein_coding protein_coding MGP_BALBcJ_T0095922.1 MGP_BALBcJ_G0035627.1 mouse_genomes_project X 32769544 32774761 + MGP_BALBcJ_P0095922 Rhox10 protein_coding protein_coding MGP_BALBcJ_T0016178.1 MGP_BALBcJ_G0014275.1 mouse_genomes_project X 8113328 8115956 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002477.1 MGP_BALBcJ_G0002386.1 mouse_genomes_project X 129800378 129801804 - TEC TEC MGP_BALBcJ_T0016719.1 MGP_BALBcJ_G0014816.1 mouse_genomes_project X 136072022 136072608 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097560.1 MGP_BALBcJ_G0036096.1 mouse_genomes_project X 135041739 135052322 + MGP_BALBcJ_P0097560 Cldn2 protein_coding protein_coding MGP_BALBcJ_T0097561.1 MGP_BALBcJ_G0036096.1 mouse_genomes_project X 135043695 135049649 + MGP_BALBcJ_P0097561 Cldn2 protein_coding protein_coding MGP_BALBcJ_T0097562.1 MGP_BALBcJ_G0036096.1 mouse_genomes_project X 135046989 135050037 + MGP_BALBcJ_P0097562 Cldn2 protein_coding protein_coding MGP_BALBcJ_T0011176.1 MGP_BALBcJ_G0009301.1 mouse_genomes_project X 99498561 99498661 - Mir672 miRNA miRNA MGP_BALBcJ_T0016487.1 MGP_BALBcJ_G0014584.1 mouse_genomes_project X 90003882 90005298 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016153.1 MGP_BALBcJ_G0014250.1 mouse_genomes_project X 2663946 2664117 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016163.1 MGP_BALBcJ_G0014260.1 mouse_genomes_project X 5981443 5982072 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016686.1 MGP_BALBcJ_G0014783.1 mouse_genomes_project X 130750811 130751554 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101542.1 MGP_BALBcJ_G0039578.1 mouse_genomes_project X 109050185 109050309 - Gm23985 snoRNA snoRNA MGP_BALBcJ_T0016822.1 MGP_BALBcJ_G0014919.1 mouse_genomes_project X 154850344 154850620 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097190.1 MGP_BALBcJ_G0035969.1 mouse_genomes_project X 101361880 101406209 - MGP_BALBcJ_P0097190 Magt1 protein_coding protein_coding MGP_BALBcJ_T0097191.1 MGP_BALBcJ_G0035969.1 mouse_genomes_project X 101361880 101406216 - MGP_BALBcJ_P0097191 Magt1 protein_coding protein_coding MGP_BALBcJ_T0097192.1 MGP_BALBcJ_G0035969.1 mouse_genomes_project X 101364302 101406096 - MGP_BALBcJ_P0097192 Magt1 protein_coding protein_coding MGP_BALBcJ_T0097193.1 MGP_BALBcJ_G0035969.1 mouse_genomes_project X 101370527 101406090 - MGP_BALBcJ_P0097193 Magt1 protein_coding protein_coding MGP_BALBcJ_T0097957.1 MGP_BALBcJ_G0036192.1 mouse_genomes_project X 155391840 155407988 - MGP_BALBcJ_P0097957 Pdha1 protein_coding protein_coding MGP_BALBcJ_T0097958.1 MGP_BALBcJ_G0036192.1 mouse_genomes_project X 155396947 155398622 - Pdha1 protein_coding retained_intron MGP_BALBcJ_T0097959.1 MGP_BALBcJ_G0036192.1 mouse_genomes_project X 155398944 155407884 - Pdha1 protein_coding retained_intron MGP_BALBcJ_T0097960.1 MGP_BALBcJ_G0036192.1 mouse_genomes_project X 155406468 155407931 - Pdha1 protein_coding processed_transcript MGP_BALBcJ_T0095767.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15412216 15424143 + MGP_BALBcJ_P0095767 Cdk16 protein_coding protein_coding MGP_BALBcJ_T0095768.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15412261 15418625 + Cdk16 protein_coding processed_transcript MGP_BALBcJ_T0095769.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15412680 15424143 + MGP_BALBcJ_P0095769 Cdk16 protein_coding protein_coding MGP_BALBcJ_T0095770.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15418545 15420548 + Cdk16 protein_coding retained_intron MGP_BALBcJ_T0095771.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15420123 15420748 + Cdk16 protein_coding retained_intron MGP_BALBcJ_T0095772.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15420280 15421471 + Cdk16 protein_coding retained_intron MGP_BALBcJ_T0095773.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15420667 15421430 + Cdk16 protein_coding retained_intron MGP_BALBcJ_T0095774.1 MGP_BALBcJ_G0035565.1 mouse_genomes_project X 15420707 15424062 + Cdk16 protein_coding processed_transcript MGP_BALBcJ_T0011115.1 MGP_BALBcJ_G0009240.1 mouse_genomes_project X 47025585 47025694 - Mir717 miRNA miRNA MGP_BALBcJ_T0016586.1 MGP_BALBcJ_G0014683.1 mouse_genomes_project X 104779151 104785145 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016295.1 MGP_BALBcJ_G0014392.1 mouse_genomes_project X 48404106 48404307 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016332.1 MGP_BALBcJ_G0014429.1 mouse_genomes_project X 56931573 56932563 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096247.1 MGP_BALBcJ_G0035735.1 mouse_genomes_project X 59306669 59318801 - MGP_BALBcJ_P0096247 Slitrk4 protein_coding protein_coding MGP_BALBcJ_T0096248.1 MGP_BALBcJ_G0035735.1 mouse_genomes_project X 59311575 59318784 - MGP_BALBcJ_P0096248 Slitrk4 protein_coding protein_coding MGP_BALBcJ_T0096249.1 MGP_BALBcJ_G0035735.1 mouse_genomes_project X 59314526 59317627 - MGP_BALBcJ_P0096249 Slitrk4 protein_coding protein_coding MGP_BALBcJ_T0016556.1 MGP_BALBcJ_G0014653.1 mouse_genomes_project X 100433003 100433784 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096916.1 MGP_BALBcJ_G0035895.1 mouse_genomes_project X 91738168 91850312 + MGP_BALBcJ_P0096916 Heph protein_coding protein_coding MGP_BALBcJ_T0096917.1 MGP_BALBcJ_G0035895.1 mouse_genomes_project X 91739182 91817491 + MGP_BALBcJ_P0096917 Heph protein_coding protein_coding MGP_BALBcJ_T0096918.1 MGP_BALBcJ_G0035895.1 mouse_genomes_project X 91739199 91850309 + MGP_BALBcJ_P0096918 Heph protein_coding protein_coding MGP_BALBcJ_T0096919.1 MGP_BALBcJ_G0035895.1 mouse_genomes_project X 91739237 91758044 + Heph protein_coding retained_intron MGP_BALBcJ_T0096920.1 MGP_BALBcJ_G0035895.1 mouse_genomes_project X 91739237 91771989 + Heph protein_coding retained_intron MGP_BALBcJ_T0016386.1 MGP_BALBcJ_G0014483.1 mouse_genomes_project X 69784282 69784666 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096809.1 MGP_BALBcJ_G0035859.1 mouse_genomes_project X 81709297 83109325 - MGP_BALBcJ_P0096809 Il1rapl1 protein_coding protein_coding MGP_BALBcJ_T0096810.1 MGP_BALBcJ_G0035859.1 mouse_genomes_project X 81715668 82882874 - MGP_BALBcJ_P0096810 Il1rapl1 protein_coding protein_coding MGP_BALBcJ_T0096811.1 MGP_BALBcJ_G0035859.1 mouse_genomes_project X 81738088 83109325 - MGP_BALBcJ_P0096811 Il1rapl1 protein_coding protein_coding MGP_BALBcJ_T0095437.1 MGP_BALBcJ_G0035481.1 mouse_genomes_project X 1567847 1620772 - MGP_BALBcJ_P0095437 Ccnb3 protein_coding protein_coding MGP_BALBcJ_T0095438.1 MGP_BALBcJ_G0035481.1 mouse_genomes_project X 1567847 1631216 - MGP_BALBcJ_P0095438 Ccnb3 protein_coding protein_coding MGP_BALBcJ_T0011129.1 MGP_BALBcJ_G0009254.1 mouse_genomes_project X 51548554 51548617 - Mir5116 miRNA miRNA MGP_BALBcJ_T0016685.1 MGP_BALBcJ_G0014782.1 mouse_genomes_project X 130324537 130325283 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018564.1 MGP_BALBcJ_G0015707.1 mouse_genomes_project X 2150453 2197933 - Gm36995 processed_transcript retained_intron MGP_BALBcJ_T0095483.1 MGP_BALBcJ_G0035492.1 mouse_genomes_project X 2267940 2278218 - Magix protein_coding processed_transcript MGP_BALBcJ_T0095484.1 MGP_BALBcJ_G0035492.1 mouse_genomes_project X 2269402 2278056 - MGP_BALBcJ_P0095484 Magix protein_coding protein_coding MGP_BALBcJ_T0016537.1 MGP_BALBcJ_G0014634.1 mouse_genomes_project X 98653520 98655324 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011154.1 MGP_BALBcJ_G0009279.1 mouse_genomes_project X 67195864 67195946 - Mir224 miRNA miRNA MGP_BALBcJ_T0016414.1 MGP_BALBcJ_G0014511.1 mouse_genomes_project X 74075355 74075577 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016362.1 MGP_BALBcJ_G0014459.1 mouse_genomes_project X 63583054 63584312 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016633.1 MGP_BALBcJ_G0014730.1 mouse_genomes_project X 113160462 113160813 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011130.1 MGP_BALBcJ_G0009255.1 mouse_genomes_project X 54037465 54037544 - Mir504 miRNA miRNA MGP_BALBcJ_T0016281.1 MGP_BALBcJ_G0014378.1 mouse_genomes_project X 45847922 45848359 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096147.1 MGP_BALBcJ_G0035698.1 mouse_genomes_project X 48366418 48380276 + MGP_BALBcJ_P0096147 4930502E18Rik protein_coding protein_coding MGP_BALBcJ_T0097022.1 MGP_BALBcJ_G0035922.1 mouse_genomes_project X 96505932 96508532 - Gm614 protein_coding processed_transcript MGP_BALBcJ_T0097023.1 MGP_BALBcJ_G0035922.1 mouse_genomes_project X 96505932 96508549 - MGP_BALBcJ_P0097023 Gm614 protein_coding protein_coding MGP_BALBcJ_T0096164.1 MGP_BALBcJ_G0035708.1 mouse_genomes_project X 51546214 51558772 - MGP_BALBcJ_P0096164 Mmgt1 protein_coding protein_coding MGP_BALBcJ_T0016264.1 MGP_BALBcJ_G0014361.1 mouse_genomes_project X 40267941 40270391 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016636.1 MGP_BALBcJ_G0014733.1 mouse_genomes_project X 114376127 114376865 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018633.1 MGP_BALBcJ_G0015729.1 mouse_genomes_project X 130185297 130222123 - processed_transcript processed_transcript MGP_BALBcJ_T0016566.1 MGP_BALBcJ_G0014663.1 mouse_genomes_project X 101697472 101700657 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016239.1 MGP_BALBcJ_G0014336.1 mouse_genomes_project X 34741169 34741840 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016402.1 MGP_BALBcJ_G0014499.1 mouse_genomes_project X 72726337 72726937 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011144.1 MGP_BALBcJ_G0009269.1 mouse_genomes_project X 61841825 61841903 - Mir881 miRNA miRNA MGP_BALBcJ_T0097909.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152965763 153017532 + MGP_BALBcJ_P0097909 Smpx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097910.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152965763 152969866 + MGP_BALBcJ_P0097910 Smpx protein_coding protein_coding MGP_BALBcJ_T0097911.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152965826 153017530 + MGP_BALBcJ_P0097911 Smpx protein_coding protein_coding MGP_BALBcJ_T0097912.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152965980 153017530 + MGP_BALBcJ_P0097912 Smpx protein_coding protein_coding MGP_BALBcJ_T0097913.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152966113 153017155 + MGP_BALBcJ_P0097913 Smpx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097914.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152969451 153017182 + MGP_BALBcJ_P0097914 Smpx protein_coding protein_coding MGP_BALBcJ_T0097915.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152981171 153017152 + Smpx protein_coding retained_intron MGP_BALBcJ_T0097916.1 MGP_BALBcJ_G0036183.1 mouse_genomes_project X 152987319 153017224 + Smpx protein_coding retained_intron MGP_BALBcJ_T0096861.1 MGP_BALBcJ_G0035880.1 mouse_genomes_project X 89567607 89579246 - MGP_BALBcJ_P0096861 Fam90a1b protein_coding protein_coding MGP_BALBcJ_T0096862.1 MGP_BALBcJ_G0035880.1 mouse_genomes_project X 89568426 89578244 - MGP_BALBcJ_P0096862 Fam90a1b protein_coding protein_coding MGP_BALBcJ_T0096863.1 MGP_BALBcJ_G0035880.1 mouse_genomes_project X 89569710 89578519 - MGP_BALBcJ_P0096863 Fam90a1b protein_coding protein_coding MGP_BALBcJ_T0016834.1 MGP_BALBcJ_G0014931.1 mouse_genomes_project X 157913150 157913605 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096429.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68857855 68873999 - MGP_BALBcJ_P0096429 L1cam protein_coding protein_coding MGP_BALBcJ_T0096430.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68858032 68884652 - MGP_BALBcJ_P0096430 L1cam protein_coding protein_coding MGP_BALBcJ_T0096431.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68858754 68873898 - MGP_BALBcJ_P0096431 L1cam protein_coding protein_coding MGP_BALBcJ_T0096432.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68858981 68860477 - L1cam protein_coding retained_intron MGP_BALBcJ_T0096433.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68859087 68860845 - MGP_BALBcJ_P0096433 L1cam protein_coding protein_coding MGP_BALBcJ_T0096434.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68860507 68861747 - L1cam protein_coding retained_intron MGP_BALBcJ_T0096435.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68860761 68861497 - L1cam protein_coding retained_intron MGP_BALBcJ_T0096436.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68861564 68862716 - L1cam protein_coding retained_intron MGP_BALBcJ_T0096437.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68863155 68864238 - L1cam protein_coding retained_intron MGP_BALBcJ_T0096438.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68863508 68865206 - MGP_BALBcJ_P0096438 L1cam protein_coding protein_coding MGP_BALBcJ_T0096439.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68867795 68884613 - L1cam protein_coding retained_intron MGP_BALBcJ_T0096440.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68869780 68900128 - L1cam protein_coding processed_transcript MGP_BALBcJ_T0096441.1 MGP_BALBcJ_G0035789.1 mouse_genomes_project X 68869857 68874373 - MGP_BALBcJ_P0096441 L1cam protein_coding protein_coding MGP_BALBcJ_T0097563.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135062370 135112193 - MGP_BALBcJ_P0097563 Morc4 protein_coding protein_coding MGP_BALBcJ_T0097564.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135062642 135112216 - MGP_BALBcJ_P0097564 Morc4 protein_coding protein_coding MGP_BALBcJ_T0097565.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135063413 135098413 - MGP_BALBcJ_P0097565 Morc4 protein_coding protein_coding MGP_BALBcJ_T0097566.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135064969 135077029 - Morc4 protein_coding retained_intron MGP_BALBcJ_T0097567.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135077398 135095477 - MGP_BALBcJ_P0097567 Morc4 protein_coding protein_coding MGP_BALBcJ_T0097568.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135096870 135112164 - Morc4 protein_coding retained_intron MGP_BALBcJ_T0097569.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135096877 135112161 - Morc4 protein_coding processed_transcript MGP_BALBcJ_T0097570.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135099284 135111949 - Morc4 protein_coding retained_intron MGP_BALBcJ_T0097571.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135099318 135111912 - MGP_BALBcJ_P0097571 Morc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097572.1 MGP_BALBcJ_G0036097.1 mouse_genomes_project X 135099432 135111738 - MGP_BALBcJ_P0097572 Morc4 protein_coding protein_coding MGP_BALBcJ_T0011138.1 MGP_BALBcJ_G0009263.1 mouse_genomes_project X 61829910 61829988 - Mir883b miRNA miRNA MGP_BALBcJ_T0097265.1 MGP_BALBcJ_G0035995.1 mouse_genomes_project X 106200584 106203511 + MGP_BALBcJ_P0097265 Pou3f4 protein_coding protein_coding MGP_BALBcJ_T0016375.1 MGP_BALBcJ_G0014472.1 mouse_genomes_project X 66467666 66467971 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096777.1 MGP_BALBcJ_G0035850.1 mouse_genomes_project X 76334192 76374756 - MGP_BALBcJ_P0096777 4930595M18Rik protein_coding protein_coding MGP_BALBcJ_T0016835.1 MGP_BALBcJ_G0014932.1 mouse_genomes_project X 157930203 157930845 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097046.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96659392 96675725 - MGP_BALBcJ_P0097046 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097047.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96659392 96674807 - MGP_BALBcJ_P0097047 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097048.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96659392 96674923 - MGP_BALBcJ_P0097048 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097049.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96659392 96675858 - MGP_BALBcJ_P0097049 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097050.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96660987 96664743 - Zmym3 protein_coding processed_transcript MGP_BALBcJ_T0097051.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96668252 96669928 - Zmym3 protein_coding retained_intron MGP_BALBcJ_T0097052.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669209 96672486 - Zmym3 protein_coding processed_transcript MGP_BALBcJ_T0097053.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669517 96670175 - Zmym3 protein_coding retained_intron MGP_BALBcJ_T0097054.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669937 96672385 - Zmym3 protein_coding retained_intron MGP_BALBcJ_T0097055.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669938 96674818 - MGP_BALBcJ_P0097055 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097056.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669941 96675694 - MGP_BALBcJ_P0097056 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097057.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669941 96674850 - MGP_BALBcJ_P0097057 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097058.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669946 96675225 - MGP_BALBcJ_P0097058 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097059.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96669966 96675373 - MGP_BALBcJ_P0097059 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0097060.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96670023 96672382 - Zmym3 protein_coding retained_intron MGP_BALBcJ_T0097061.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96671195 96674838 - Zmym3 protein_coding processed_transcript MGP_BALBcJ_T0097062.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96671282 96672699 - Zmym3 protein_coding retained_intron MGP_BALBcJ_T0097063.1 MGP_BALBcJ_G0035928.1 mouse_genomes_project X 96671391 96674869 - MGP_BALBcJ_P0097063 Zmym3 protein_coding protein_coding MGP_BALBcJ_T0100291.1 MGP_BALBcJ_G0038327.1 mouse_genomes_project X 133524072 133524179 - Gm22057 snRNA snRNA MGP_BALBcJ_T0016532.1 MGP_BALBcJ_G0014629.1 mouse_genomes_project X 98420910 98421600 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016718.1 MGP_BALBcJ_G0014815.1 mouse_genomes_project X 136048245 136050784 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097138.1 MGP_BALBcJ_G0035952.1 mouse_genomes_project X 98587971 98589004 + MGP_BALBcJ_P0097138 1700029P11Rik protein_coding protein_coding MGP_BALBcJ_T0096680.1 MGP_BALBcJ_G0035821.1 mouse_genomes_project X 70046312 70146013 - MGP_BALBcJ_P0096680 Gab3 protein_coding protein_coding MGP_BALBcJ_T0096681.1 MGP_BALBcJ_G0035821.1 mouse_genomes_project X 70046314 70146728 - Gab3 protein_coding processed_transcript MGP_BALBcJ_T0096682.1 MGP_BALBcJ_G0035821.1 mouse_genomes_project X 70046328 70145995 - MGP_BALBcJ_P0096682 Gab3 protein_coding protein_coding MGP_BALBcJ_T0016381.1 MGP_BALBcJ_G0014478.1 mouse_genomes_project X 69502913 69503746 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009362.1 MGP_BALBcJ_G0007513.1 mouse_genomes_project X 55981766 56017391 + Gm14664 lincRNA lincRNA MGP_BALBcJ_T0016724.1 MGP_BALBcJ_G0014821.1 mouse_genomes_project X 136822415 136822715 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016474.1 MGP_BALBcJ_G0014571.1 mouse_genomes_project X 89096657 89096928 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016607.1 MGP_BALBcJ_G0014704.1 mouse_genomes_project X 109194779 109196132 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016363.1 MGP_BALBcJ_G0014460.1 mouse_genomes_project X 63583097 63584312 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005596.1 MGP_BALBcJ_G0004716.1 mouse_genomes_project X 165264989 165269561 - Gm15726 antisense antisense MGP_BALBcJ_T0011152.1 MGP_BALBcJ_G0009277.1 mouse_genomes_project X 62981815 62981890 - Mir509 miRNA miRNA MGP_BALBcJ_T0100255.1 MGP_BALBcJ_G0038291.1 mouse_genomes_project X 51712928 51713034 + Gm23258 snRNA snRNA MGP_BALBcJ_T0097321.1 MGP_BALBcJ_G0036017.1 mouse_genomes_project X 114877051 114880096 + MGP_BALBcJ_P0097321 Pabpc5 protein_coding protein_coding MGP_BALBcJ_T0097322.1 MGP_BALBcJ_G0036017.1 mouse_genomes_project X 114877080 114879940 + MGP_BALBcJ_P0097322 Pabpc5 protein_coding protein_coding MGP_BALBcJ_T0016709.1 MGP_BALBcJ_G0014806.1 mouse_genomes_project X 134477346 134477951 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100300.1 MGP_BALBcJ_G0038336.1 mouse_genomes_project X 149099559 149099659 - Gm25895 snRNA snRNA MGP_BALBcJ_T0016197.1 MGP_BALBcJ_G0014294.1 mouse_genomes_project X 13640445 13641062 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100234.1 MGP_BALBcJ_G0038270.1 mouse_genomes_project X 8786931 8787022 - Gm25552 snRNA snRNA MGP_BALBcJ_T0016754.1 MGP_BALBcJ_G0014851.1 mouse_genomes_project X 140356494 140357190 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101808.1 MGP_BALBcJ_G0039745.1 mouse_genomes_project X 132009892 132010214 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0100308.1 MGP_BALBcJ_G0038344.1 mouse_genomes_project X 160984595 160984702 - Gm22062 snRNA snRNA MGP_BALBcJ_T0016536.1 MGP_BALBcJ_G0014633.1 mouse_genomes_project X 98596355 98596874 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016498.1 MGP_BALBcJ_G0014595.1 mouse_genomes_project X 91822158 91823866 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096059.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43212874 43266050 - MGP_BALBcJ_P0096059 Zfp280c protein_coding protein_coding MGP_BALBcJ_T0096060.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43212874 43263538 - MGP_BALBcJ_P0096060 Zfp280c protein_coding protein_coding MGP_BALBcJ_T0096061.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43212874 43266129 - MGP_BALBcJ_P0096061 Zfp280c protein_coding protein_coding MGP_BALBcJ_T0096062.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43212875 43263166 - MGP_BALBcJ_P0096062 Zfp280c protein_coding protein_coding MGP_BALBcJ_T0096063.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43214006 43214953 - Zfp280c protein_coding retained_intron MGP_BALBcJ_T0096064.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43249442 43266068 - Zfp280c protein_coding processed_transcript MGP_BALBcJ_T0096065.1 MGP_BALBcJ_G0035664.1 mouse_genomes_project X 43257499 43266181 - Zfp280c protein_coding processed_transcript MGP_BALBcJ_T0100241.1 MGP_BALBcJ_G0038277.1 mouse_genomes_project X 15542220 15542325 - Gm26065 snRNA snRNA MGP_BALBcJ_T0101524.1 MGP_BALBcJ_G0039560.1 mouse_genomes_project X 63639399 63639527 - Gm22435 snoRNA snoRNA MGP_BALBcJ_T0097589.1 MGP_BALBcJ_G0036102.1 mouse_genomes_project X 135697937 135706878 + Prps1 protein_coding processed_transcript MGP_BALBcJ_T0097590.1 MGP_BALBcJ_G0036102.1 mouse_genomes_project X 135697937 135717554 + MGP_BALBcJ_P0097590 Prps1 protein_coding protein_coding MGP_BALBcJ_T0097622.1 MGP_BALBcJ_G0036116.1 mouse_genomes_project X 137359354 137374124 + MGP_BALBcJ_P0097622 Nxt2 protein_coding protein_coding MGP_BALBcJ_T0097623.1 MGP_BALBcJ_G0036116.1 mouse_genomes_project X 137360809 137362453 + Nxt2 protein_coding retained_intron MGP_BALBcJ_T0097624.1 MGP_BALBcJ_G0036116.1 mouse_genomes_project X 137360949 137374130 + MGP_BALBcJ_P0097624 Nxt2 protein_coding protein_coding MGP_BALBcJ_T0016259.1 MGP_BALBcJ_G0014356.1 mouse_genomes_project X 39163601 39163996 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097411.1 MGP_BALBcJ_G0036046.1 mouse_genomes_project X 129630532 129643503 - MGP_BALBcJ_P0097411 Gla protein_coding protein_coding MGP_BALBcJ_T0097412.1 MGP_BALBcJ_G0036046.1 mouse_genomes_project X 129637667 129642670 - MGP_BALBcJ_P0097412 Gla protein_coding protein_coding MGP_BALBcJ_T0016763.1 MGP_BALBcJ_G0014860.1 mouse_genomes_project X 141364001 141365047 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095568.1 MGP_BALBcJ_G0035508.1 mouse_genomes_project X 2536691 2541010 - MGP_BALBcJ_P0095568 Eras protein_coding protein_coding MGP_BALBcJ_T0016263.1 MGP_BALBcJ_G0014360.1 mouse_genomes_project X 40220206 40222324 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016823.1 MGP_BALBcJ_G0014920.1 mouse_genomes_project X 154853846 154854408 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009372.1 MGP_BALBcJ_G0007521.1 mouse_genomes_project X 86195019 86195643 + Gm14773 lincRNA lincRNA MGP_BALBcJ_T0096078.1 MGP_BALBcJ_G0035669.1 mouse_genomes_project X 43655740 43836956 - MGP_BALBcJ_P0096078 Enox2 protein_coding protein_coding MGP_BALBcJ_T0096079.1 MGP_BALBcJ_G0035669.1 mouse_genomes_project X 43708849 43933104 - Enox2 protein_coding processed_transcript MGP_BALBcJ_T0096080.1 MGP_BALBcJ_G0035669.1 mouse_genomes_project X 43712066 43933057 - Enox2 protein_coding processed_transcript MGP_BALBcJ_T0096081.1 MGP_BALBcJ_G0035669.1 mouse_genomes_project X 43716351 43933087 - Enox2 protein_coding processed_transcript MGP_BALBcJ_T0009385.1 MGP_BALBcJ_G0007529.1 mouse_genomes_project X 98940545 99011123 - Ftx lincRNA lincRNA MGP_BALBcJ_T0009386.1 MGP_BALBcJ_G0007529.1 mouse_genomes_project X 98946833 99001896 - Ftx lincRNA lincRNA MGP_BALBcJ_T0009387.1 MGP_BALBcJ_G0007529.1 mouse_genomes_project X 98953504 99011032 - Ftx lincRNA lincRNA MGP_BALBcJ_T0009388.1 MGP_BALBcJ_G0007529.1 mouse_genomes_project X 98953504 99001805 - Ftx lincRNA lincRNA MGP_BALBcJ_T0009389.1 MGP_BALBcJ_G0007529.1 mouse_genomes_project X 98992482 99011123 - Ftx lincRNA lincRNA MGP_BALBcJ_T0009390.1 MGP_BALBcJ_G0007529.1 mouse_genomes_project X 98992535 99009869 - Ftx lincRNA lincRNA MGP_BALBcJ_T0016170.1 MGP_BALBcJ_G0014267.1 mouse_genomes_project X 7230599 7230944 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016282.1 MGP_BALBcJ_G0014379.1 mouse_genomes_project X 45854288 45855388 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009392.1 MGP_BALBcJ_G0007531.1 mouse_genomes_project X 100754612 100798558 - 5330434G04Rik lincRNA lincRNA MGP_BALBcJ_T0009393.1 MGP_BALBcJ_G0007531.1 mouse_genomes_project X 100756690 100798558 - 5330434G04Rik lincRNA lincRNA MGP_BALBcJ_T0009394.1 MGP_BALBcJ_G0007531.1 mouse_genomes_project X 100780950 100798536 - 5330434G04Rik lincRNA lincRNA MGP_BALBcJ_T0009395.1 MGP_BALBcJ_G0007531.1 mouse_genomes_project X 100783618 100794696 - 5330434G04Rik lincRNA lincRNA MGP_BALBcJ_T0096873.1 MGP_BALBcJ_G0035883.1 mouse_genomes_project X 89864540 89867031 + MGP_BALBcJ_P0096873 Gspt2 protein_coding protein_coding MGP_BALBcJ_T0096874.1 MGP_BALBcJ_G0035883.1 mouse_genomes_project X 89864547 89871722 + MGP_BALBcJ_P0096874 Gspt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0016156.1 MGP_BALBcJ_G0014253.1 mouse_genomes_project X 3642330 3643827 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098063.1 MGP_BALBcJ_G0036218.1 mouse_genomes_project X 159630699 159665923 + MGP_BALBcJ_P0098063 Vegfd protein_coding protein_coding MGP_BALBcJ_T0098064.1 MGP_BALBcJ_G0036218.1 mouse_genomes_project X 159654227 159663752 + Vegfd protein_coding retained_intron MGP_BALBcJ_T0016561.1 MGP_BALBcJ_G0014658.1 mouse_genomes_project X 100970065 100970303 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095715.1 MGP_BALBcJ_G0035547.1 mouse_genomes_project X 11278922 11279743 + MGP_BALBcJ_P0095715 Cypt1 protein_coding protein_coding MGP_BALBcJ_T0095716.1 MGP_BALBcJ_G0035547.1 mouse_genomes_project X 11278925 11279742 + MGP_BALBcJ_P0095716 Cypt1 protein_coding protein_coding MGP_BALBcJ_T0009368.1 MGP_BALBcJ_G0007518.1 mouse_genomes_project X 70998073 71012169 - Gm14715 lincRNA lincRNA MGP_BALBcJ_T0016775.1 MGP_BALBcJ_G0014872.1 mouse_genomes_project X 146139872 146140531 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016713.1 MGP_BALBcJ_G0014810.1 mouse_genomes_project X 135035912 135036018 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097428.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129864063 129867442 - MGP_BALBcJ_P0097428 Armcx2 protein_coding protein_coding MGP_BALBcJ_T0097429.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129864065 129869137 - MGP_BALBcJ_P0097429 Armcx2 protein_coding protein_coding MGP_BALBcJ_T0097430.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129864065 129868912 - MGP_BALBcJ_P0097430 Armcx2 protein_coding protein_coding MGP_BALBcJ_T0097431.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129864065 129869137 - MGP_BALBcJ_P0097431 Armcx2 protein_coding protein_coding MGP_BALBcJ_T0097432.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129866403 129867428 - Armcx2 protein_coding processed_transcript MGP_BALBcJ_T0097433.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129867178 129867859 - Armcx2 protein_coding processed_transcript MGP_BALBcJ_T0097434.1 MGP_BALBcJ_G0036050.1 mouse_genomes_project X 129867803 129868877 - Armcx2 protein_coding processed_transcript MGP_BALBcJ_T0011123.1 MGP_BALBcJ_G0009248.1 mouse_genomes_project X 47675532 47675623 - Mir450-1 miRNA miRNA MGP_BALBcJ_T0097340.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124721399 125151934 + Diaph2 protein_coding retained_intron MGP_BALBcJ_T0097341.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124721399 125435757 + MGP_BALBcJ_P0097341 Diaph2 protein_coding protein_coding MGP_BALBcJ_T0097342.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124721453 125297005 + Diaph2 protein_coding retained_intron MGP_BALBcJ_T0097343.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124721462 125431153 + MGP_BALBcJ_P0097343 Diaph2 protein_coding protein_coding MGP_BALBcJ_T0097344.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124721481 125296678 + Diaph2 protein_coding retained_intron MGP_BALBcJ_T0097345.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124721633 125435760 + MGP_BALBcJ_P0097345 Diaph2 protein_coding protein_coding MGP_BALBcJ_T0097346.1 MGP_BALBcJ_G0036027.1 mouse_genomes_project X 124936927 125004904 + Diaph2 protein_coding processed_transcript MGP_BALBcJ_T0102895.1 MGP_BALBcJ_G0040710.1 mouse_genomes_project X 165262862 165276123 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101530.1 MGP_BALBcJ_G0039566.1 mouse_genomes_project X 70162659 70162777 + Gm25520 snoRNA snoRNA MGP_BALBcJ_T0016314.1 MGP_BALBcJ_G0014411.1 mouse_genomes_project X 54796330 54797387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097163.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101178727 101321740 - MGP_BALBcJ_P0097163 Atrx protein_coding protein_coding MGP_BALBcJ_T0097164.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101181529 101183163 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097165.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101182862 101184912 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097166.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101199231 101207335 - MGP_BALBcJ_P0097166 Atrx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097167.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101199257 101210861 - Atrx protein_coding processed_transcript MGP_BALBcJ_T0097168.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101207353 101219656 - MGP_BALBcJ_P0097168 Atrx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097169.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101219408 101235749 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097170.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101219763 101235933 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097171.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101235359 101240914 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097172.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101235712 101240587 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097173.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101240497 101264747 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097174.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101241102 101265078 - MGP_BALBcJ_P0097174 Atrx protein_coding protein_coding MGP_BALBcJ_T0097175.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101245714 101277432 - MGP_BALBcJ_P0097175 Atrx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097176.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101254836 101264788 - MGP_BALBcJ_P0097176 Atrx protein_coding protein_coding MGP_BALBcJ_T0097177.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101264612 101321703 - MGP_BALBcJ_P0097177 Atrx protein_coding protein_coding MGP_BALBcJ_T0097178.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101265990 101321679 - MGP_BALBcJ_P0097178 Atrx protein_coding protein_coding MGP_BALBcJ_T0097179.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101266442 101321707 - MGP_BALBcJ_P0097179 Atrx protein_coding protein_coding MGP_BALBcJ_T0097180.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101266442 101321687 - MGP_BALBcJ_P0097180 Atrx protein_coding protein_coding MGP_BALBcJ_T0097181.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101266722 101321704 - MGP_BALBcJ_P0097181 Atrx protein_coding protein_coding MGP_BALBcJ_T0097182.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101266923 101321696 - MGP_BALBcJ_P0097182 Atrx protein_coding protein_coding MGP_BALBcJ_T0097183.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101266962 101321684 - MGP_BALBcJ_P0097183 Atrx protein_coding protein_coding MGP_BALBcJ_T0097184.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101267847 101269866 - Atrx protein_coding retained_intron MGP_BALBcJ_T0097185.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101267867 101321575 - MGP_BALBcJ_P0097185 Atrx protein_coding protein_coding MGP_BALBcJ_T0097186.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101271433 101320714 - MGP_BALBcJ_P0097186 Atrx protein_coding protein_coding MGP_BALBcJ_T0097187.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101273844 101321640 - MGP_BALBcJ_P0097187 Atrx protein_coding protein_coding MGP_BALBcJ_T0097188.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101277389 101321734 - MGP_BALBcJ_P0097188 Atrx protein_coding protein_coding MGP_BALBcJ_T0097189.1 MGP_BALBcJ_G0035968.1 mouse_genomes_project X 101290108 101321683 - Atrx protein_coding processed_transcript MGP_BALBcJ_T0016249.1 MGP_BALBcJ_G0014346.1 mouse_genomes_project X 36637535 36638108 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016350.1 MGP_BALBcJ_G0014447.1 mouse_genomes_project X 61804193 61805386 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016806.1 MGP_BALBcJ_G0014903.1 mouse_genomes_project X 152809324 152810021 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097424.1 MGP_BALBcJ_G0036049.1 mouse_genomes_project X 129803354 129806332 - MGP_BALBcJ_P0097424 Armcx6 protein_coding protein_coding MGP_BALBcJ_T0097425.1 MGP_BALBcJ_G0036049.1 mouse_genomes_project X 129803356 129806418 - MGP_BALBcJ_P0097425 Armcx6 protein_coding protein_coding MGP_BALBcJ_T0097426.1 MGP_BALBcJ_G0036049.1 mouse_genomes_project X 129804970 129806348 - Armcx6 protein_coding processed_transcript MGP_BALBcJ_T0097427.1 MGP_BALBcJ_G0036049.1 mouse_genomes_project X 129805150 129806362 - Armcx6 protein_coding processed_transcript MGP_BALBcJ_T0101807.1 MGP_BALBcJ_G0039744.1 mouse_genomes_project X 130182655 130185404 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0102871.1 MGP_BALBcJ_G0040686.1 mouse_genomes_project X 81357715 81358756 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101560.1 MGP_BALBcJ_G0039596.1 mouse_genomes_project X 150403711 150403843 + Gm25429 snoRNA snoRNA MGP_BALBcJ_T0096892.1 MGP_BALBcJ_G0035887.1 mouse_genomes_project X 90721558 90745351 - MGP_BALBcJ_P0096892 Amer1 protein_coding protein_coding MGP_BALBcJ_T0097680.1 MGP_BALBcJ_G0036131.1 mouse_genomes_project X 142068441 142187679 + Htr2c protein_coding retained_intron MGP_BALBcJ_T0097681.1 MGP_BALBcJ_G0036131.1 mouse_genomes_project X 142068441 142096921 + Htr2c protein_coding retained_intron MGP_BALBcJ_T0097682.1 MGP_BALBcJ_G0036131.1 mouse_genomes_project X 142068558 142182145 + Htr2c protein_coding processed_transcript MGP_BALBcJ_T0097683.1 MGP_BALBcJ_G0036131.1 mouse_genomes_project X 142068951 142288829 + MGP_BALBcJ_P0097683 Htr2c protein_coding protein_coding MGP_BALBcJ_T0097684.1 MGP_BALBcJ_G0036131.1 mouse_genomes_project X 142180182 142302378 + MGP_BALBcJ_P0097684 Htr2c protein_coding protein_coding MGP_BALBcJ_T0016796.1 MGP_BALBcJ_G0014893.1 mouse_genomes_project X 150454865 150455567 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096252.1 MGP_BALBcJ_G0035738.1 mouse_genomes_project X 61685753 61701484 + MGP_BALBcJ_P0096252 Slitrk2 protein_coding protein_coding MGP_BALBcJ_T0096253.1 MGP_BALBcJ_G0035738.1 mouse_genomes_project X 61693116 61696598 + MGP_BALBcJ_P0096253 Slitrk2 protein_coding protein_coding MGP_BALBcJ_T0097526.1 MGP_BALBcJ_G0036083.1 mouse_genomes_project X 132791674 134067075 + MGP_BALBcJ_P0097526 Il1rapl2 protein_coding protein_coding MGP_BALBcJ_T0097527.1 MGP_BALBcJ_G0036083.1 mouse_genomes_project X 132792085 133726000 + Il1rapl2 protein_coding retained_intron MGP_BALBcJ_T0097528.1 MGP_BALBcJ_G0036083.1 mouse_genomes_project X 132869819 134066753 + MGP_BALBcJ_P0097528 Il1rapl2 protein_coding protein_coding MGP_BALBcJ_T0102856.1 MGP_BALBcJ_G0040671.1 mouse_genomes_project X 50663027 50676186 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0096340.1 MGP_BALBcJ_G0035762.1 mouse_genomes_project X 67190830 67209596 - MGP_BALBcJ_P0096340 Gabre protein_coding protein_coding MGP_BALBcJ_T0096341.1 MGP_BALBcJ_G0035762.1 mouse_genomes_project X 67196201 67204599 - Gabre protein_coding processed_transcript MGP_BALBcJ_T0096342.1 MGP_BALBcJ_G0035762.1 mouse_genomes_project X 67203803 67209596 - Gabre protein_coding retained_intron MGP_BALBcJ_T0016182.1 MGP_BALBcJ_G0014279.1 mouse_genomes_project X 9082754 9083620 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009416.1 MGP_BALBcJ_G0007545.1 mouse_genomes_project X 156550298 156570967 + lincRNA lincRNA MGP_BALBcJ_T0016492.1 MGP_BALBcJ_G0014589.1 mouse_genomes_project X 90562669 90563652 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095429.1 MGP_BALBcJ_G0035475.1 mouse_genomes_project X 58949 61317 - MGP_BALBcJ_P0095429 Mycs protein_coding protein_coding MGP_BALBcJ_T0016146.1 MGP_BALBcJ_G0014243.1 mouse_genomes_project X 2138893 2139188 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097930.1 MGP_BALBcJ_G0036187.1 mouse_genomes_project X 154627287 154631668 + Eif1ax protein_coding retained_intron MGP_BALBcJ_T0097931.1 MGP_BALBcJ_G0036187.1 mouse_genomes_project X 154627287 154647175 + MGP_BALBcJ_P0097931 Eif1ax protein_coding protein_coding MGP_BALBcJ_T0095681.1 MGP_BALBcJ_G0035540.1 mouse_genomes_project X 7454476 7542106 - MGP_BALBcJ_P0095681 Med14 protein_coding protein_coding MGP_BALBcJ_T0095682.1 MGP_BALBcJ_G0035540.1 mouse_genomes_project X 7454481 7541458 - MGP_BALBcJ_P0095682 Med14 protein_coding unknown_likely_coding MGP_BALBcJ_T0095683.1 MGP_BALBcJ_G0035540.1 mouse_genomes_project X 7458142 7495879 - MGP_BALBcJ_P0095683 Med14 protein_coding protein_coding MGP_BALBcJ_T0095684.1 MGP_BALBcJ_G0035540.1 mouse_genomes_project X 7458856 7542106 - Med14 protein_coding retained_intron MGP_BALBcJ_T0095685.1 MGP_BALBcJ_G0035540.1 mouse_genomes_project X 7486141 7493696 - Med14 protein_coding retained_intron MGP_BALBcJ_T0095686.1 MGP_BALBcJ_G0035540.1 mouse_genomes_project X 7488897 7542106 - MGP_BALBcJ_P0095686 Med14 protein_coding protein_coding MGP_BALBcJ_T0096844.1 MGP_BALBcJ_G0035877.1 mouse_genomes_project X 89271769 89294186 - MGP_BALBcJ_P0096844 protein_coding protein_coding MGP_BALBcJ_T0096845.1 MGP_BALBcJ_G0035877.1 mouse_genomes_project X 89274176 89315165 - MGP_BALBcJ_P0096845 protein_coding protein_coding MGP_BALBcJ_T0096846.1 MGP_BALBcJ_G0035877.1 mouse_genomes_project X 89290008 89314899 - MGP_BALBcJ_P0096846 protein_coding protein_coding MGP_BALBcJ_T0096847.1 MGP_BALBcJ_G0035877.1 mouse_genomes_project X 89290506 89315472 - protein_coding processed_transcript MGP_BALBcJ_T0096848.1 MGP_BALBcJ_G0035877.1 mouse_genomes_project X 89305698 89314922 - protein_coding retained_intron MGP_BALBcJ_T0096753.1 MGP_BALBcJ_G0035842.1 mouse_genomes_project X 73319282 73324778 - MGP_BALBcJ_P0096753 Obp1b protein_coding protein_coding MGP_BALBcJ_T0016343.1 MGP_BALBcJ_G0014440.1 mouse_genomes_project X 59088071 59088424 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016469.1 MGP_BALBcJ_G0014566.1 mouse_genomes_project X 87164981 87165644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096280.1 MGP_BALBcJ_G0035747.1 mouse_genomes_project X 65332060 65335600 + MGP_BALBcJ_P0096280 1110012L19Rik protein_coding protein_coding MGP_BALBcJ_T0016213.1 MGP_BALBcJ_G0014310.1 mouse_genomes_project X 16963452 16963806 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102869.1 MGP_BALBcJ_G0040684.1 mouse_genomes_project X 81303232 81304255 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0096749.1 MGP_BALBcJ_G0035839.1 mouse_genomes_project X 73046251 73053092 + MGP_BALBcJ_P0096749 protein_coding protein_coding MGP_BALBcJ_T0011135.1 MGP_BALBcJ_G0009260.1 mouse_genomes_project X 61818102 61818179 - Mir743b miRNA miRNA MGP_BALBcJ_T0016652.1 MGP_BALBcJ_G0014749.1 mouse_genomes_project X 121303248 121303911 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016570.1 MGP_BALBcJ_G0014667.1 mouse_genomes_project X 102083027 102084381 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005545.1 MGP_BALBcJ_G0004678.1 mouse_genomes_project X 2657324 2688755 + Gm14820 antisense antisense MGP_BALBcJ_T0005546.1 MGP_BALBcJ_G0004678.1 mouse_genomes_project X 2665783 2676402 + Gm14820 antisense antisense MGP_BALBcJ_T0005547.1 MGP_BALBcJ_G0004678.1 mouse_genomes_project X 2665859 2689473 + Gm14820 antisense antisense MGP_BALBcJ_T0005548.1 MGP_BALBcJ_G0004678.1 mouse_genomes_project X 2665939 2691133 + Gm14820 antisense antisense MGP_BALBcJ_T0005549.1 MGP_BALBcJ_G0004678.1 mouse_genomes_project X 2668233 2689470 + Gm14820 antisense antisense MGP_BALBcJ_T0101791.1 MGP_BALBcJ_G0039732.1 mouse_genomes_project X 17222416 17224653 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101792.1 MGP_BALBcJ_G0039732.1 mouse_genomes_project X 17222513 17224596 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0018575.1 MGP_BALBcJ_G0015714.1 mouse_genomes_project X 34805118 35218022 + processed_transcript processed_transcript MGP_BALBcJ_T0096030.1 MGP_BALBcJ_G0035655.1 mouse_genomes_project X 42673305 42684061 - MGP_BALBcJ_P0096030 Apln protein_coding protein_coding MGP_BALBcJ_T0016358.1 MGP_BALBcJ_G0014455.1 mouse_genomes_project X 63285535 63285901 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097974.1 MGP_BALBcJ_G0036195.1 mouse_genomes_project X 155887262 155980959 - MGP_BALBcJ_P0097974 Ppef1 protein_coding protein_coding MGP_BALBcJ_T0097975.1 MGP_BALBcJ_G0036195.1 mouse_genomes_project X 155905138 155996411 - MGP_BALBcJ_P0097975 Ppef1 protein_coding protein_coding MGP_BALBcJ_T0097976.1 MGP_BALBcJ_G0036195.1 mouse_genomes_project X 155950884 155980923 - MGP_BALBcJ_P0097976 Ppef1 protein_coding protein_coding MGP_BALBcJ_T0096163.1 MGP_BALBcJ_G0035707.1 mouse_genomes_project X 51496525 51502258 - MGP_BALBcJ_P0096163 Gm648 protein_coding protein_coding MGP_BALBcJ_T0016721.1 MGP_BALBcJ_G0014818.1 mouse_genomes_project X 136494345 136495128 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096360.1 MGP_BALBcJ_G0035771.1 mouse_genomes_project X 68211313 68213818 + MGP_BALBcJ_P0096360 F8a protein_coding protein_coding MGP_BALBcJ_T0016254.1 MGP_BALBcJ_G0014351.1 mouse_genomes_project X 38161534 38161706 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096169.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51692903 51757410 + MGP_BALBcJ_P0096169 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096170.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51692981 51757402 + MGP_BALBcJ_P0096170 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096171.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51693247 51756299 + MGP_BALBcJ_P0096171 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096172.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51743526 51757404 + MGP_BALBcJ_P0096172 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096173.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51743812 51757404 + MGP_BALBcJ_P0096173 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096174.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51743819 51756652 + MGP_BALBcJ_P0096174 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096175.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51743908 51753269 + MGP_BALBcJ_P0096175 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096176.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51750602 51754730 + MGP_BALBcJ_P0096176 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096177.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51751788 51753319 + MGP_BALBcJ_P0096177 Fhl1 protein_coding protein_coding MGP_BALBcJ_T0096178.1 MGP_BALBcJ_G0035710.1 mouse_genomes_project X 51752061 51753807 + Fhl1 protein_coding processed_transcript MGP_BALBcJ_T0098692.1 MGP_BALBcJ_G0036746.1 mouse_genomes_project X 71905795 71905903 - Gm26041 rRNA rRNA MGP_BALBcJ_T0095943.1 MGP_BALBcJ_G0035635.1 mouse_genomes_project X 33259329 33290671 - MGP_BALBcJ_P0095943 Cul4b protein_coding protein_coding MGP_BALBcJ_T0095944.1 MGP_BALBcJ_G0035635.1 mouse_genomes_project X 33259329 33303111 - MGP_BALBcJ_P0095944 Cul4b protein_coding protein_coding MGP_BALBcJ_T0095945.1 MGP_BALBcJ_G0035635.1 mouse_genomes_project X 33259625 33290808 - MGP_BALBcJ_P0095945 Cul4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095946.1 MGP_BALBcJ_G0035635.1 mouse_genomes_project X 33259629 33303098 - MGP_BALBcJ_P0095946 Cul4b protein_coding protein_coding MGP_BALBcJ_T0095693.1 MGP_BALBcJ_G0035542.1 mouse_genomes_project X 8086969 8101028 + MGP_BALBcJ_P0095693 Ddx3x protein_coding protein_coding MGP_BALBcJ_T0095694.1 MGP_BALBcJ_G0035542.1 mouse_genomes_project X 8087021 8098052 + Ddx3x protein_coding processed_transcript MGP_BALBcJ_T0095695.1 MGP_BALBcJ_G0035542.1 mouse_genomes_project X 8087031 8093902 + Ddx3x protein_coding retained_intron MGP_BALBcJ_T0095696.1 MGP_BALBcJ_G0035542.1 mouse_genomes_project X 8093313 8094882 + Ddx3x protein_coding retained_intron MGP_BALBcJ_T0095697.1 MGP_BALBcJ_G0035542.1 mouse_genomes_project X 8093814 8095945 + Ddx3x protein_coding retained_intron MGP_BALBcJ_T0016743.1 MGP_BALBcJ_G0014840.1 mouse_genomes_project X 139263327 139266339 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095610.1 MGP_BALBcJ_G0035517.1 mouse_genomes_project X 2806051 2814191 - MGP_BALBcJ_P0095610 Ebp protein_coding protein_coding MGP_BALBcJ_T0095611.1 MGP_BALBcJ_G0035517.1 mouse_genomes_project X 2806053 2807897 - Ebp protein_coding retained_intron MGP_BALBcJ_T0095612.1 MGP_BALBcJ_G0035517.1 mouse_genomes_project X 2807470 2814079 - MGP_BALBcJ_P0095612 Ebp protein_coding protein_coding MGP_BALBcJ_T0095613.1 MGP_BALBcJ_G0035517.1 mouse_genomes_project X 2810577 2813577 - Ebp protein_coding retained_intron MGP_BALBcJ_T0097932.1 MGP_BALBcJ_G0036188.1 mouse_genomes_project X 154667120 154764128 + MGP_BALBcJ_P0097932 Map7d2 protein_coding protein_coding MGP_BALBcJ_T0097933.1 MGP_BALBcJ_G0036188.1 mouse_genomes_project X 154702539 154756184 + MGP_BALBcJ_P0097933 Map7d2 protein_coding protein_coding MGP_BALBcJ_T0097934.1 MGP_BALBcJ_G0036188.1 mouse_genomes_project X 154719969 154752017 + MGP_BALBcJ_P0097934 Map7d2 protein_coding protein_coding MGP_BALBcJ_T0097935.1 MGP_BALBcJ_G0036188.1 mouse_genomes_project X 154719981 154731219 + MGP_BALBcJ_P0097935 Map7d2 protein_coding protein_coding MGP_BALBcJ_T0016787.1 MGP_BALBcJ_G0014884.1 mouse_genomes_project X 148584132 148585113 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016581.1 MGP_BALBcJ_G0014678.1 mouse_genomes_project X 103825987 103830829 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095809.1 MGP_BALBcJ_G0035574.1 mouse_genomes_project X 15830467 15834493 + MGP_BALBcJ_P0095809 Spaca5 protein_coding protein_coding MGP_BALBcJ_T0016406.1 MGP_BALBcJ_G0014503.1 mouse_genomes_project X 73451874 73452394 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095906.1 MGP_BALBcJ_G0035620.1 mouse_genomes_project X 32403227 32411022 - MGP_BALBcJ_P0095906 Rhox2e protein_coding protein_coding MGP_BALBcJ_T0016843.1 MGP_BALBcJ_G0014940.1 mouse_genomes_project X 158717187 158718672 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101558.1 MGP_BALBcJ_G0039594.1 mouse_genomes_project X 145942760 145942888 - Gm24907 snoRNA snoRNA MGP_BALBcJ_T0097591.1 MGP_BALBcJ_G0036103.1 mouse_genomes_project X 135781275 135784413 - Tsc22d3 protein_coding processed_transcript MGP_BALBcJ_T0097592.1 MGP_BALBcJ_G0036103.1 mouse_genomes_project X 135781275 135784933 - MGP_BALBcJ_P0097592 Tsc22d3 protein_coding protein_coding MGP_BALBcJ_T0097593.1 MGP_BALBcJ_G0036103.1 mouse_genomes_project X 135781284 135784846 - Tsc22d3 protein_coding retained_intron MGP_BALBcJ_T0097594.1 MGP_BALBcJ_G0036103.1 mouse_genomes_project X 135782006 135842512 - MGP_BALBcJ_P0097594 Tsc22d3 protein_coding protein_coding MGP_BALBcJ_T0097595.1 MGP_BALBcJ_G0036103.1 mouse_genomes_project X 135782095 135790102 - MGP_BALBcJ_P0097595 Tsc22d3 protein_coding protein_coding MGP_BALBcJ_T0097596.1 MGP_BALBcJ_G0036103.1 mouse_genomes_project X 135784847 135790293 - Tsc22d3 protein_coding processed_transcript MGP_BALBcJ_T0096104.1 MGP_BALBcJ_G0035679.1 mouse_genomes_project X 45627739 45641830 - MGP_BALBcJ_P0096104 Rap2c protein_coding protein_coding MGP_BALBcJ_T0018621.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217212 104279243 + processed_transcript processed_transcript MGP_BALBcJ_T0018622.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217236 104279037 + processed_transcript processed_transcript MGP_BALBcJ_T0018623.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217312 104367017 + processed_transcript processed_transcript MGP_BALBcJ_T0018624.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217391 104279030 + processed_transcript processed_transcript MGP_BALBcJ_T0018625.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217398 104222246 + processed_transcript retained_intron MGP_BALBcJ_T0018626.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217413 104259970 + processed_transcript processed_transcript MGP_BALBcJ_T0018627.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104217429 104260174 + processed_transcript processed_transcript MGP_BALBcJ_T0018628.1 MGP_BALBcJ_G0015725.1 mouse_genomes_project X 104293884 104367332 + processed_transcript processed_transcript MGP_BALBcJ_T0100298.1 MGP_BALBcJ_G0038334.1 mouse_genomes_project X 146532908 146533058 + Gm22248 snRNA snRNA MGP_BALBcJ_T0097808.1 MGP_BALBcJ_G0036148.1 mouse_genomes_project X 147141878 147153463 - MGP_BALBcJ_P0097808 Ribc1 protein_coding protein_coding MGP_BALBcJ_T0097809.1 MGP_BALBcJ_G0036148.1 mouse_genomes_project X 147146753 147153438 - Ribc1 protein_coding processed_transcript MGP_BALBcJ_T0096925.1 MGP_BALBcJ_G0035897.1 mouse_genomes_project X 92355645 92365156 + MGP_BALBcJ_P0096925 Pgr15l protein_coding protein_coding MGP_BALBcJ_T0097747.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146115701 146151085 - MGP_BALBcJ_P0097747 Gnl3l protein_coding protein_coding MGP_BALBcJ_T0097748.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146115701 146151085 - MGP_BALBcJ_P0097748 Gnl3l protein_coding protein_coding MGP_BALBcJ_T0097749.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146120746 146126847 - Gnl3l protein_coding retained_intron MGP_BALBcJ_T0097750.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146130142 146133845 - Gnl3l protein_coding retained_intron MGP_BALBcJ_T0097751.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146130512 146151085 - MGP_BALBcJ_P0097751 Gnl3l protein_coding protein_coding MGP_BALBcJ_T0097752.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146136274 146151085 - MGP_BALBcJ_P0097752 Gnl3l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097753.1 MGP_BALBcJ_G0036140.1 mouse_genomes_project X 146136318 146151085 - MGP_BALBcJ_P0097753 Gnl3l protein_coding protein_coding MGP_BALBcJ_T0096494.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69018037 69028007 - MGP_BALBcJ_P0096494 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096495.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69018041 69028004 - MGP_BALBcJ_P0096495 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096496.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69018049 69028004 - MGP_BALBcJ_P0096496 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096497.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69018049 69028004 - MGP_BALBcJ_P0096497 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096498.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69018917 69027915 - Irak1 protein_coding retained_intron MGP_BALBcJ_T0096499.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69018917 69027915 - Irak1 protein_coding retained_intron MGP_BALBcJ_T0096500.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69019082 69028002 - MGP_BALBcJ_P0096500 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096501.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69019469 69022419 - MGP_BALBcJ_P0096501 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096502.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69019483 69024026 - MGP_BALBcJ_P0096502 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096503.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69019551 69027834 - MGP_BALBcJ_P0096503 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096504.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69019551 69027834 - MGP_BALBcJ_P0096504 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096505.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69020659 69025073 - MGP_BALBcJ_P0096505 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096506.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69021214 69026581 - MGP_BALBcJ_P0096506 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096507.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69025084 69026736 - Irak1 protein_coding retained_intron MGP_BALBcJ_T0096508.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69025084 69027176 - MGP_BALBcJ_P0096508 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096509.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69026271 69027258 - MGP_BALBcJ_P0096509 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096510.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69026313 69027029 - MGP_BALBcJ_P0096510 Irak1 protein_coding protein_coding MGP_BALBcJ_T0096511.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69026322 69027816 - Irak1 protein_coding processed_transcript MGP_BALBcJ_T0096512.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69026702 69027897 - Irak1 protein_coding retained_intron MGP_BALBcJ_T0096513.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69026717 69027465 - Irak1 protein_coding retained_intron MGP_BALBcJ_T0096514.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69026830 69027597 - Irak1 protein_coding processed_transcript MGP_BALBcJ_T0096515.1 MGP_BALBcJ_G0035795.1 mouse_genomes_project X 69027179 69027920 - Irak1 protein_coding retained_intron MGP_BALBcJ_T0016844.1 MGP_BALBcJ_G0014941.1 mouse_genomes_project X 159024956 159025172 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016800.1 MGP_BALBcJ_G0014897.1 mouse_genomes_project X 151800507 151801477 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016144.1 MGP_BALBcJ_G0014241.1 mouse_genomes_project X 2106036 2106450 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100293.1 MGP_BALBcJ_G0038329.1 mouse_genomes_project X 135922650 135922757 + Gm23199 snRNA snRNA MGP_BALBcJ_T0101802.1 MGP_BALBcJ_G0039740.1 mouse_genomes_project X 100352380 100353011 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0096743.1 MGP_BALBcJ_G0035836.1 mouse_genomes_project X 72555270 72714531 + MGP_BALBcJ_P0096743 Tbl1x protein_coding protein_coding MGP_BALBcJ_T0096744.1 MGP_BALBcJ_G0035836.1 mouse_genomes_project X 72555471 72711292 + Tbl1x protein_coding retained_intron MGP_BALBcJ_T0016655.1 MGP_BALBcJ_G0014752.1 mouse_genomes_project X 121928734 121928989 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095843.1 MGP_BALBcJ_G0035588.1 mouse_genomes_project X 31063255 31077946 + Lonrf3 protein_coding retained_intron MGP_BALBcJ_T0095844.1 MGP_BALBcJ_G0035588.1 mouse_genomes_project X 31063255 31097642 + MGP_BALBcJ_P0095844 Lonrf3 protein_coding protein_coding MGP_BALBcJ_T0095845.1 MGP_BALBcJ_G0035588.1 mouse_genomes_project X 31064118 31077089 + MGP_BALBcJ_P0095845 Lonrf3 protein_coding protein_coding MGP_BALBcJ_T0016166.1 MGP_BALBcJ_G0014263.1 mouse_genomes_project X 6638015 6638456 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016815.1 MGP_BALBcJ_G0014912.1 mouse_genomes_project X 153521084 153521658 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095779.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15533915 15609989 + MGP_BALBcJ_P0095779 Araf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095780.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596761 15610011 + MGP_BALBcJ_P0095780 Araf protein_coding protein_coding MGP_BALBcJ_T0095781.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596782 15605002 + Araf protein_coding retained_intron MGP_BALBcJ_T0095782.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596784 15601123 + MGP_BALBcJ_P0095782 Araf protein_coding protein_coding MGP_BALBcJ_T0095783.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596793 15602779 + Araf protein_coding processed_transcript MGP_BALBcJ_T0095784.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596796 15601108 + MGP_BALBcJ_P0095784 Araf protein_coding protein_coding MGP_BALBcJ_T0095785.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596800 15599936 + Araf protein_coding retained_intron MGP_BALBcJ_T0095786.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15596807 15601669 + MGP_BALBcJ_P0095786 Araf protein_coding protein_coding MGP_BALBcJ_T0095787.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15599348 15600433 + Araf protein_coding retained_intron MGP_BALBcJ_T0095788.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15601636 15609605 + MGP_BALBcJ_P0095788 Araf protein_coding unknown_likely_coding MGP_BALBcJ_T0095789.1 MGP_BALBcJ_G0035567.1 mouse_genomes_project X 15607214 15609700 + MGP_BALBcJ_P0095789 Araf protein_coding protein_coding MGP_BALBcJ_T0100292.1 MGP_BALBcJ_G0038328.1 mouse_genomes_project X 133642519 133642624 - Gm23958 snRNA snRNA MGP_BALBcJ_T0011119.1 MGP_BALBcJ_G0009244.1 mouse_genomes_project X 47348761 47348841 - Mir20b miRNA miRNA MGP_BALBcJ_T0101810.1 MGP_BALBcJ_G0039747.1 mouse_genomes_project X 145356513 145357483 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0016783.1 MGP_BALBcJ_G0014880.1 mouse_genomes_project X 147700114 147701022 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102878.1 MGP_BALBcJ_G0040693.1 mouse_genomes_project X 98022599 98103832 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097140.1 MGP_BALBcJ_G0035954.1 mouse_genomes_project X 98736213 98775997 + MGP_BALBcJ_P0097140 Chic1 protein_coding protein_coding MGP_BALBcJ_T0098032.1 MGP_BALBcJ_G0036209.1 mouse_genomes_project X 159006870 159008061 - MGP_BALBcJ_P0098032 Rnf138rt1 protein_coding protein_coding MGP_BALBcJ_T0016389.1 MGP_BALBcJ_G0014486.1 mouse_genomes_project X 70332909 70334838 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016717.1 MGP_BALBcJ_G0014814.1 mouse_genomes_project X 135863837 135864291 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095547.1 MGP_BALBcJ_G0035501.1 mouse_genomes_project X 2490238 2492300 + Pim2 protein_coding retained_intron MGP_BALBcJ_T0095548.1 MGP_BALBcJ_G0035501.1 mouse_genomes_project X 2490278 2495410 + MGP_BALBcJ_P0095548 Pim2 protein_coding protein_coding MGP_BALBcJ_T0095549.1 MGP_BALBcJ_G0035501.1 mouse_genomes_project X 2490282 2495406 + MGP_BALBcJ_P0095549 Pim2 protein_coding protein_coding MGP_BALBcJ_T0095550.1 MGP_BALBcJ_G0035501.1 mouse_genomes_project X 2490594 2493380 + Pim2 protein_coding processed_transcript MGP_BALBcJ_T0011753.1 MGP_BALBcJ_G0009878.1 mouse_genomes_project X 124266391 124266669 - Gm22225 misc_RNA misc_RNA MGP_BALBcJ_T0100231.1 MGP_BALBcJ_G0038267.1 mouse_genomes_project X 2700382 2700484 + Gm22083 snRNA snRNA MGP_BALBcJ_T0095820.1 MGP_BALBcJ_G0035581.1 mouse_genomes_project X 17957971 18021732 - MGP_BALBcJ_P0095820 Klhl13 protein_coding protein_coding MGP_BALBcJ_T0095821.1 MGP_BALBcJ_G0035581.1 mouse_genomes_project X 17957979 18022634 - MGP_BALBcJ_P0095821 Klhl13 protein_coding protein_coding MGP_BALBcJ_T0095822.1 MGP_BALBcJ_G0035581.1 mouse_genomes_project X 17957980 18055115 - MGP_BALBcJ_P0095822 Klhl13 protein_coding protein_coding MGP_BALBcJ_T0095823.1 MGP_BALBcJ_G0035581.1 mouse_genomes_project X 17957980 18003956 - MGP_BALBcJ_P0095823 Klhl13 protein_coding protein_coding MGP_BALBcJ_T0095824.1 MGP_BALBcJ_G0035581.1 mouse_genomes_project X 17973051 18033112 - Klhl13 protein_coding processed_transcript MGP_BALBcJ_T0016742.1 MGP_BALBcJ_G0014839.1 mouse_genomes_project X 138310840 138311870 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098689.1 MGP_BALBcJ_G0036743.1 mouse_genomes_project X 44492141 44492229 + n-R5s6 rRNA rRNA MGP_BALBcJ_T0009363.1 MGP_BALBcJ_G0007514.1 mouse_genomes_project X 57437058 57447418 - lincRNA lincRNA MGP_BALBcJ_T0009364.1 MGP_BALBcJ_G0007514.1 mouse_genomes_project X 57437058 57442635 - lincRNA lincRNA MGP_BALBcJ_T0016388.1 MGP_BALBcJ_G0014485.1 mouse_genomes_project X 70206785 70206992 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097942.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 154892336 155241175 + MGP_BALBcJ_P0097942 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097943.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 154892604 155180763 + Sh3kbp1 protein_coding retained_intron MGP_BALBcJ_T0097944.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 154892604 155236265 + MGP_BALBcJ_P0097944 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097945.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 154956794 155126523 + MGP_BALBcJ_P0097945 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097946.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 154968102 155236961 + MGP_BALBcJ_P0097946 Sh3kbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097947.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 154968102 155237263 + MGP_BALBcJ_P0097947 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097948.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155099075 155238758 + MGP_BALBcJ_P0097948 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097949.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155099088 155237263 + MGP_BALBcJ_P0097949 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097950.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155099569 155239010 + Sh3kbp1 protein_coding processed_transcript MGP_BALBcJ_T0097951.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155179536 155236415 + MGP_BALBcJ_P0097951 Sh3kbp1 protein_coding protein_coding MGP_BALBcJ_T0097952.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155203452 155235048 + Sh3kbp1 protein_coding processed_transcript MGP_BALBcJ_T0097953.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155204448 155239011 + Sh3kbp1 protein_coding processed_transcript MGP_BALBcJ_T0097954.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155204667 155237263 + Sh3kbp1 protein_coding processed_transcript MGP_BALBcJ_T0097955.1 MGP_BALBcJ_G0036190.1 mouse_genomes_project X 155204773 155236286 + Sh3kbp1 protein_coding processed_transcript MGP_BALBcJ_T0011748.1 MGP_BALBcJ_G0009873.1 mouse_genomes_project X 98990154 98990247 + Gm27987 misc_RNA misc_RNA MGP_BALBcJ_T0016608.1 MGP_BALBcJ_G0014705.1 mouse_genomes_project X 109217944 109219493 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097439.1 MGP_BALBcJ_G0036052.1 mouse_genomes_project X 130039010 130077066 - MGP_BALBcJ_P0097439 Zmat1 protein_coding protein_coding MGP_BALBcJ_T0097440.1 MGP_BALBcJ_G0036052.1 mouse_genomes_project X 130039013 130077090 - MGP_BALBcJ_P0097440 Zmat1 protein_coding protein_coding MGP_BALBcJ_T0097441.1 MGP_BALBcJ_G0036052.1 mouse_genomes_project X 130040415 130046615 - Zmat1 protein_coding retained_intron MGP_BALBcJ_T0016495.1 MGP_BALBcJ_G0014592.1 mouse_genomes_project X 91484540 91484978 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016190.1 MGP_BALBcJ_G0014287.1 mouse_genomes_project X 11372770 11373945 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016226.1 MGP_BALBcJ_G0014323.1 mouse_genomes_project X 31571142 31571299 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016836.1 MGP_BALBcJ_G0014933.1 mouse_genomes_project X 158014015 158059685 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097523.1 MGP_BALBcJ_G0036082.1 mouse_genomes_project X 132356995 132362083 - MGP_BALBcJ_P0097523 protein_coding protein_coding MGP_BALBcJ_T0097524.1 MGP_BALBcJ_G0036082.1 mouse_genomes_project X 132356995 132361928 - MGP_BALBcJ_P0097524 protein_coding protein_coding MGP_BALBcJ_T0097525.1 MGP_BALBcJ_G0036082.1 mouse_genomes_project X 132360267 132366129 - MGP_BALBcJ_P0097525 protein_coding protein_coding MGP_BALBcJ_T0100250.1 MGP_BALBcJ_G0038286.1 mouse_genomes_project X 42892183 42892342 + Gm24038 snRNA snRNA MGP_BALBcJ_T0016684.1 MGP_BALBcJ_G0014781.1 mouse_genomes_project X 129970965 129971598 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016766.1 MGP_BALBcJ_G0014863.1 mouse_genomes_project X 141751724 141752201 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098103.1 MGP_BALBcJ_G0036228.1 mouse_genomes_project X 161650178 161710103 - MGP_BALBcJ_P0098103 Ofd1 protein_coding protein_coding MGP_BALBcJ_T0018635.1 MGP_BALBcJ_G0015731.1 mouse_genomes_project X 131255791 131266609 + 5730412P04Rik processed_transcript processed_transcript MGP_BALBcJ_T0016813.1 MGP_BALBcJ_G0014910.1 mouse_genomes_project X 153409511 153410598 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095662.1 MGP_BALBcJ_G0035534.1 mouse_genomes_project X 5242923 5356222 + Tspan7 protein_coding retained_intron MGP_BALBcJ_T0095663.1 MGP_BALBcJ_G0035534.1 mouse_genomes_project X 5242923 5356222 + MGP_BALBcJ_P0095663 Tspan7 protein_coding protein_coding MGP_BALBcJ_T0095664.1 MGP_BALBcJ_G0035534.1 mouse_genomes_project X 5242923 5356222 + MGP_BALBcJ_P0095664 Tspan7 protein_coding protein_coding MGP_BALBcJ_T0102857.1 MGP_BALBcJ_G0040672.1 mouse_genomes_project X 50705127 50730898 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0096043.1 MGP_BALBcJ_G0035659.1 mouse_genomes_project X 42918225 42943799 + MGP_BALBcJ_P0096043 Utp14a protein_coding protein_coding MGP_BALBcJ_T0096044.1 MGP_BALBcJ_G0035659.1 mouse_genomes_project X 42918260 42929313 + Utp14a protein_coding processed_transcript MGP_BALBcJ_T0096045.1 MGP_BALBcJ_G0035659.1 mouse_genomes_project X 42918281 42934433 + Utp14a protein_coding processed_transcript MGP_BALBcJ_T0016629.1 MGP_BALBcJ_G0014726.1 mouse_genomes_project X 112888138 112890180 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016435.1 MGP_BALBcJ_G0014532.1 mouse_genomes_project X 80708711 80709148 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002473.1 MGP_BALBcJ_G0002382.1 mouse_genomes_project X 98960362 98965043 - TEC TEC MGP_BALBcJ_T0016378.1 MGP_BALBcJ_G0014475.1 mouse_genomes_project X 68313369 68313801 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095628.1 MGP_BALBcJ_G0035520.1 mouse_genomes_project X 2894107 2895904 + MGP_BALBcJ_P0095628 Slc38a5 protein_coding protein_coding MGP_BALBcJ_T0095629.1 MGP_BALBcJ_G0035520.1 mouse_genomes_project X 2894125 2903150 + MGP_BALBcJ_P0095629 Slc38a5 protein_coding protein_coding MGP_BALBcJ_T0095630.1 MGP_BALBcJ_G0035520.1 mouse_genomes_project X 2894389 2903150 + MGP_BALBcJ_P0095630 Slc38a5 protein_coding protein_coding MGP_BALBcJ_T0095631.1 MGP_BALBcJ_G0035520.1 mouse_genomes_project X 2894662 2903145 + MGP_BALBcJ_P0095631 Slc38a5 protein_coding protein_coding MGP_BALBcJ_T0097338.1 MGP_BALBcJ_G0036025.1 mouse_genomes_project X 122684764 122693649 - MGP_BALBcJ_P0097338 Cldn34c4 protein_coding protein_coding MGP_BALBcJ_T0016748.1 MGP_BALBcJ_G0014845.1 mouse_genomes_project X 139431949 139432279 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016816.1 MGP_BALBcJ_G0014913.1 mouse_genomes_project X 153586346 153586923 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011125.1 MGP_BALBcJ_G0009250.1 mouse_genomes_project X 47676809 47676894 - Mir542 miRNA miRNA MGP_BALBcJ_T0097885.1 MGP_BALBcJ_G0036176.1 mouse_genomes_project X 150601863 150616407 - MGP_BALBcJ_P0097885 Prdx4 protein_coding protein_coding MGP_BALBcJ_T0097886.1 MGP_BALBcJ_G0036176.1 mouse_genomes_project X 150606391 150619499 - MGP_BALBcJ_P0097886 Prdx4 protein_coding protein_coding MGP_BALBcJ_T0097887.1 MGP_BALBcJ_G0036176.1 mouse_genomes_project X 150614731 150616414 - Prdx4 protein_coding processed_transcript MGP_BALBcJ_T0095839.1 MGP_BALBcJ_G0035587.1 mouse_genomes_project X 30926297 30929458 + MGP_BALBcJ_P0095839 Zcchc12 protein_coding protein_coding MGP_BALBcJ_T0095840.1 MGP_BALBcJ_G0035587.1 mouse_genomes_project X 30926339 30929466 + MGP_BALBcJ_P0095840 Zcchc12 protein_coding protein_coding MGP_BALBcJ_T0095841.1 MGP_BALBcJ_G0035587.1 mouse_genomes_project X 30926352 30929465 + MGP_BALBcJ_P0095841 Zcchc12 protein_coding protein_coding MGP_BALBcJ_T0095842.1 MGP_BALBcJ_G0035587.1 mouse_genomes_project X 30926379 30929465 + MGP_BALBcJ_P0095842 Zcchc12 protein_coding protein_coding MGP_BALBcJ_T0016793.1 MGP_BALBcJ_G0014890.1 mouse_genomes_project X 150014762 150015748 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016328.1 MGP_BALBcJ_G0014425.1 mouse_genomes_project X 56554071 56554506 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096750.1 MGP_BALBcJ_G0035840.1 mouse_genomes_project X 73046251 73052649 + MGP_BALBcJ_P0096750 protein_coding protein_coding MGP_BALBcJ_T0016246.1 MGP_BALBcJ_G0014343.1 mouse_genomes_project X 36401568 36401952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102875.1 MGP_BALBcJ_G0040690.1 mouse_genomes_project X 90923088 90923623 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100246.1 MGP_BALBcJ_G0038282.1 mouse_genomes_project X 31795598 31795707 - Gm26099 snRNA snRNA MGP_BALBcJ_T0011145.1 MGP_BALBcJ_G0009270.1 mouse_genomes_project X 61850311 61850388 - Mir871 miRNA miRNA MGP_BALBcJ_T0016478.1 MGP_BALBcJ_G0014575.1 mouse_genomes_project X 89523867 89524720 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095687.1 MGP_BALBcJ_G0035541.1 mouse_genomes_project X 7856157 7931715 + MGP_BALBcJ_P0095687 protein_coding protein_coding MGP_BALBcJ_T0095688.1 MGP_BALBcJ_G0035541.1 mouse_genomes_project X 7856173 7930427 + protein_coding retained_intron MGP_BALBcJ_T0095689.1 MGP_BALBcJ_G0035541.1 mouse_genomes_project X 7856842 7994049 + MGP_BALBcJ_P0095689 protein_coding unknown_likely_coding MGP_BALBcJ_T0095690.1 MGP_BALBcJ_G0035541.1 mouse_genomes_project X 7898211 7931499 + MGP_BALBcJ_P0095690 protein_coding protein_coding MGP_BALBcJ_T0095691.1 MGP_BALBcJ_G0035541.1 mouse_genomes_project X 7937325 7940836 + protein_coding retained_intron MGP_BALBcJ_T0095692.1 MGP_BALBcJ_G0035541.1 mouse_genomes_project X 7937592 7942048 + protein_coding retained_intron MGP_BALBcJ_T0009422.1 MGP_BALBcJ_G0007551.1 mouse_genomes_project X 162325257 162332428 - Gm8817 lincRNA lincRNA MGP_BALBcJ_T0009423.1 MGP_BALBcJ_G0007551.1 mouse_genomes_project X 162325399 162332428 - Gm8817 lincRNA lincRNA MGP_BALBcJ_T0009424.1 MGP_BALBcJ_G0007551.1 mouse_genomes_project X 162325615 162330437 - Gm8817 lincRNA lincRNA MGP_BALBcJ_T0096289.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66166628 66276365 + MGP_BALBcJ_P0096289 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096290.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171503 66276365 + MGP_BALBcJ_P0096290 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096291.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171503 66276365 + MGP_BALBcJ_P0096291 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096292.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171503 66217887 + MGP_BALBcJ_P0096292 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096293.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171525 66276358 + MGP_BALBcJ_P0096293 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096294.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171528 66259947 + Mtm1 protein_coding retained_intron MGP_BALBcJ_T0096295.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171533 66258668 + Mtm1 protein_coding retained_intron MGP_BALBcJ_T0096296.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171536 66276335 + MGP_BALBcJ_P0096296 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096297.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171536 66276364 + MGP_BALBcJ_P0096297 Mtm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0096298.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171556 66271383 + Mtm1 protein_coding retained_intron MGP_BALBcJ_T0096299.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171579 66276335 + MGP_BALBcJ_P0096299 Mtm1 protein_coding protein_coding MGP_BALBcJ_T0096300.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171582 66194831 + Mtm1 protein_coding retained_intron MGP_BALBcJ_T0096301.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66171582 66212834 + Mtm1 protein_coding retained_intron MGP_BALBcJ_T0096302.1 MGP_BALBcJ_G0035751.1 mouse_genomes_project X 66262454 66276761 + Mtm1 protein_coding retained_intron MGP_BALBcJ_T0016354.1 MGP_BALBcJ_G0014451.1 mouse_genomes_project X 62186943 62187561 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101531.1 MGP_BALBcJ_G0039567.1 mouse_genomes_project X 70972943 70973070 + Gm23320 snoRNA snoRNA MGP_BALBcJ_T0101566.1 MGP_BALBcJ_G0039602.1 mouse_genomes_project X 157981098 157981217 + Gm23786 snoRNA snoRNA MGP_BALBcJ_T0016712.1 MGP_BALBcJ_G0014809.1 mouse_genomes_project X 134954994 134955781 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097676.1 MGP_BALBcJ_G0036130.1 mouse_genomes_project X 140542700 140586113 - MGP_BALBcJ_P0097676 Amot protein_coding protein_coding MGP_BALBcJ_T0097677.1 MGP_BALBcJ_G0036130.1 mouse_genomes_project X 140548146 140583292 - MGP_BALBcJ_P0097677 Amot protein_coding protein_coding MGP_BALBcJ_T0097678.1 MGP_BALBcJ_G0036130.1 mouse_genomes_project X 140556026 140558191 - Amot protein_coding retained_intron MGP_BALBcJ_T0097679.1 MGP_BALBcJ_G0036130.1 mouse_genomes_project X 140571939 140601359 - MGP_BALBcJ_P0097679 Amot protein_coding protein_coding MGP_BALBcJ_T0011168.1 MGP_BALBcJ_G0009293.1 mouse_genomes_project X 93976873 93976971 - Gm27554 miRNA miRNA MGP_BALBcJ_T0016512.1 MGP_BALBcJ_G0014609.1 mouse_genomes_project X 95576746 95577884 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098417.1 MGP_BALBcJ_G0036471.1 mouse_genomes_project X 45854288 45855395 - pseudogene pseudogene MGP_BALBcJ_T0098131.1 MGP_BALBcJ_G0036237.1 mouse_genomes_project X 162727900 163413860 - MGP_BALBcJ_P0098131 Frmpd4 protein_coding protein_coding MGP_BALBcJ_T0098132.1 MGP_BALBcJ_G0036237.1 mouse_genomes_project X 162727900 163881659 - MGP_BALBcJ_P0098132 Frmpd4 protein_coding protein_coding MGP_BALBcJ_T0098133.1 MGP_BALBcJ_G0036237.1 mouse_genomes_project X 162727904 163166908 - MGP_BALBcJ_P0098133 Frmpd4 protein_coding protein_coding MGP_BALBcJ_T0098134.1 MGP_BALBcJ_G0036237.1 mouse_genomes_project X 162731889 162992420 - MGP_BALBcJ_P0098134 Frmpd4 protein_coding protein_coding MGP_BALBcJ_T0095590.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2742304 2751884 - MGP_BALBcJ_P0095590 Wdr13 protein_coding protein_coding MGP_BALBcJ_T0095591.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2742306 2751934 - MGP_BALBcJ_P0095591 Wdr13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095592.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2742327 2751846 - MGP_BALBcJ_P0095592 Wdr13 protein_coding protein_coding MGP_BALBcJ_T0095593.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2744307 2751899 - MGP_BALBcJ_P0095593 Wdr13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095594.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2744411 2751896 - MGP_BALBcJ_P0095594 Wdr13 protein_coding protein_coding MGP_BALBcJ_T0095595.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2744704 2747595 - Wdr13 protein_coding retained_intron MGP_BALBcJ_T0095596.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2747111 2751895 - Wdr13 protein_coding processed_transcript MGP_BALBcJ_T0095597.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2748218 2751921 - MGP_BALBcJ_P0095597 Wdr13 protein_coding protein_coding MGP_BALBcJ_T0095598.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2748795 2751589 - Wdr13 protein_coding retained_intron MGP_BALBcJ_T0095599.1 MGP_BALBcJ_G0035514.1 mouse_genomes_project X 2751194 2751968 - Wdr13 protein_coding processed_transcript MGP_BALBcJ_T0016654.1 MGP_BALBcJ_G0014751.1 mouse_genomes_project X 121879421 121881458 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011734.1 MGP_BALBcJ_G0009859.1 mouse_genomes_project X 31806891 31807162 - Gm24809 misc_RNA misc_RNA MGP_BALBcJ_T0002474.1 MGP_BALBcJ_G0002383.1 mouse_genomes_project X 99161379 99163391 - TEC TEC MGP_BALBcJ_T0096816.1 MGP_BALBcJ_G0035863.1 mouse_genomes_project X 85914001 85914994 + MGP_BALBcJ_P0096816 Gm44 protein_coding protein_coding MGP_BALBcJ_T0097375.1 MGP_BALBcJ_G0036035.1 mouse_genomes_project X 129170169 129183114 - MGP_BALBcJ_P0097375 Xkrx protein_coding protein_coding MGP_BALBcJ_T0097376.1 MGP_BALBcJ_G0036035.1 mouse_genomes_project X 129172236 129183262 - Xkrx protein_coding processed_transcript MGP_BALBcJ_T0096833.1 MGP_BALBcJ_G0035874.1 mouse_genomes_project X 88820646 88912947 + MGP_BALBcJ_P0096833 Pcyt1b protein_coding protein_coding MGP_BALBcJ_T0096834.1 MGP_BALBcJ_G0035874.1 mouse_genomes_project X 88840809 88912947 + MGP_BALBcJ_P0096834 Pcyt1b protein_coding protein_coding MGP_BALBcJ_T0096835.1 MGP_BALBcJ_G0035874.1 mouse_genomes_project X 88894539 88897833 + Pcyt1b protein_coding processed_transcript MGP_BALBcJ_T0016162.1 MGP_BALBcJ_G0014259.1 mouse_genomes_project X 5790996 5791489 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097656.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429058 139488998 + MGP_BALBcJ_P0097656 Alg13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097657.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429061 139435174 + MGP_BALBcJ_P0097657 Alg13 protein_coding protein_coding MGP_BALBcJ_T0097658.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429061 139453390 + MGP_BALBcJ_P0097658 Alg13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097659.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429076 139488998 + MGP_BALBcJ_P0097659 Alg13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097660.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429081 139435045 + Alg13 protein_coding processed_transcript MGP_BALBcJ_T0097661.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429081 139489003 + MGP_BALBcJ_P0097661 Alg13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097662.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139429099 139435154 + MGP_BALBcJ_P0097662 Alg13 protein_coding protein_coding MGP_BALBcJ_T0097663.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139449508 139452653 + Alg13 protein_coding processed_transcript MGP_BALBcJ_T0097664.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139450133 139456896 + Alg13 protein_coding retained_intron MGP_BALBcJ_T0097665.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139450797 139489001 + MGP_BALBcJ_P0097665 Alg13 protein_coding unknown_likely_coding MGP_BALBcJ_T0097666.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139452656 139489003 + Alg13 protein_coding processed_transcript MGP_BALBcJ_T0097667.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139454091 139460120 + Alg13 protein_coding retained_intron MGP_BALBcJ_T0097668.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139461202 139489003 + Alg13 protein_coding processed_transcript MGP_BALBcJ_T0097669.1 MGP_BALBcJ_G0036126.1 mouse_genomes_project X 139471729 139484324 + Alg13 protein_coding processed_transcript MGP_BALBcJ_T0016266.1 MGP_BALBcJ_G0014363.1 mouse_genomes_project X 40833548 40835081 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016653.1 MGP_BALBcJ_G0014750.1 mouse_genomes_project X 121580579 121581078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016671.1 MGP_BALBcJ_G0014768.1 mouse_genomes_project X 127208611 127209554 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016183.1 MGP_BALBcJ_G0014280.1 mouse_genomes_project X 9752123 9753000 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005577.1 MGP_BALBcJ_G0004702.1 mouse_genomes_project X 94716505 94718234 + Gm14808 antisense antisense MGP_BALBcJ_T0016529.1 MGP_BALBcJ_G0014626.1 mouse_genomes_project X 98332814 98333572 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016433.1 MGP_BALBcJ_G0014530.1 mouse_genomes_project X 80628426 80629012 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016269.1 MGP_BALBcJ_G0014366.1 mouse_genomes_project X 42065687 42066653 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016169.1 MGP_BALBcJ_G0014266.1 mouse_genomes_project X 6957281 6957631 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097142.1 MGP_BALBcJ_G0035956.1 mouse_genomes_project X 98801775 98859437 + MGP_BALBcJ_P0097142 Gm26992 protein_coding protein_coding MGP_BALBcJ_T0098003.1 MGP_BALBcJ_G0036203.1 mouse_genomes_project X 157993256 158012016 + MGP_BALBcJ_P0098003 Rbbp7 protein_coding protein_coding MGP_BALBcJ_T0098004.1 MGP_BALBcJ_G0036203.1 mouse_genomes_project X 157993275 158011680 + MGP_BALBcJ_P0098004 Rbbp7 protein_coding protein_coding MGP_BALBcJ_T0098005.1 MGP_BALBcJ_G0036203.1 mouse_genomes_project X 157993316 158008839 + MGP_BALBcJ_P0098005 Rbbp7 protein_coding protein_coding MGP_BALBcJ_T0098006.1 MGP_BALBcJ_G0036203.1 mouse_genomes_project X 157993944 158005174 + MGP_BALBcJ_P0098006 Rbbp7 protein_coding protein_coding MGP_BALBcJ_T0098007.1 MGP_BALBcJ_G0036203.1 mouse_genomes_project X 158007521 158011335 + MGP_BALBcJ_P0098007 Rbbp7 protein_coding protein_coding MGP_BALBcJ_T0097522.1 MGP_BALBcJ_G0036081.1 mouse_genomes_project X 132289297 132321881 + MGP_BALBcJ_P0097522 Fam199x protein_coding protein_coding MGP_BALBcJ_T0016283.1 MGP_BALBcJ_G0014380.1 mouse_genomes_project X 45854288 45855405 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018634.1 MGP_BALBcJ_G0015730.1 mouse_genomes_project X 130421169 130447693 + processed_transcript processed_transcript MGP_BALBcJ_T0095804.1 MGP_BALBcJ_G0035573.1 mouse_genomes_project X 15791101 15824064 - MGP_BALBcJ_P0095804 Zfp182 protein_coding protein_coding MGP_BALBcJ_T0095805.1 MGP_BALBcJ_G0035573.1 mouse_genomes_project X 15791105 15824113 - MGP_BALBcJ_P0095805 Zfp182 protein_coding protein_coding MGP_BALBcJ_T0095806.1 MGP_BALBcJ_G0035573.1 mouse_genomes_project X 15791751 15824047 - MGP_BALBcJ_P0095806 Zfp182 protein_coding protein_coding MGP_BALBcJ_T0095807.1 MGP_BALBcJ_G0035573.1 mouse_genomes_project X 15793751 15824377 - Zfp182 protein_coding processed_transcript MGP_BALBcJ_T0095808.1 MGP_BALBcJ_G0035573.1 mouse_genomes_project X 15819738 15824104 - Zfp182 protein_coding processed_transcript MGP_BALBcJ_T0016145.1 MGP_BALBcJ_G0014242.1 mouse_genomes_project X 2126629 2127192 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096819.1 MGP_BALBcJ_G0035866.1 mouse_genomes_project X 86726096 86726798 - MGP_BALBcJ_P0096819 1700084M14Rik protein_coding protein_coding MGP_BALBcJ_T0102883.1 MGP_BALBcJ_G0040698.1 mouse_genomes_project X 130355626 130358988 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0016577.1 MGP_BALBcJ_G0014674.1 mouse_genomes_project X 102768949 102769976 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016167.1 MGP_BALBcJ_G0014264.1 mouse_genomes_project X 6685819 6686018 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097352.1 MGP_BALBcJ_G0036029.1 mouse_genomes_project X 128876107 128890828 + MGP_BALBcJ_P0097352 Tnmd protein_coding protein_coding MGP_BALBcJ_T0016850.1 MGP_BALBcJ_G0014947.1 mouse_genomes_project X 161325260 161327628 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016687.1 MGP_BALBcJ_G0014784.1 mouse_genomes_project X 131132786 131133506 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016425.1 MGP_BALBcJ_G0014522.1 mouse_genomes_project X 77338826 77339976 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102868.1 MGP_BALBcJ_G0040683.1 mouse_genomes_project X 81284266 81285299 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097264.1 MGP_BALBcJ_G0035994.1 mouse_genomes_project X 105298991 105300805 + MGP_BALBcJ_P0097264 protein_coding protein_coding MGP_BALBcJ_T0100275.1 MGP_BALBcJ_G0038311.1 mouse_genomes_project X 99387023 99387130 - Gm23378 snRNA snRNA MGP_BALBcJ_T0016605.1 MGP_BALBcJ_G0014702.1 mouse_genomes_project X 108424495 108426260 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016171.1 MGP_BALBcJ_G0014268.1 mouse_genomes_project X 7431192 7431552 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102854.1 MGP_BALBcJ_G0040669.1 mouse_genomes_project X 41241190 41241961 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0097285.1 MGP_BALBcJ_G0036002.1 mouse_genomes_project X 107475671 107480466 + MGP_BALBcJ_P0097285 4933403O08Rik protein_coding protein_coding MGP_BALBcJ_T0097286.1 MGP_BALBcJ_G0036002.1 mouse_genomes_project X 107477086 107480466 + MGP_BALBcJ_P0097286 4933403O08Rik protein_coding protein_coding MGP_BALBcJ_T0097287.1 MGP_BALBcJ_G0036002.1 mouse_genomes_project X 107477195 107480393 + MGP_BALBcJ_P0097287 4933403O08Rik protein_coding protein_coding MGP_BALBcJ_T0011171.1 MGP_BALBcJ_G0009296.1 mouse_genomes_project X 97541923 97542019 - Gm26318 miRNA miRNA MGP_BALBcJ_T0095938.1 MGP_BALBcJ_G0035634.1 mouse_genomes_project X 33129768 33184120 - MGP_BALBcJ_P0095938 Lamp2 protein_coding protein_coding MGP_BALBcJ_T0095939.1 MGP_BALBcJ_G0035634.1 mouse_genomes_project X 33133474 33184120 - MGP_BALBcJ_P0095939 Lamp2 protein_coding protein_coding MGP_BALBcJ_T0095940.1 MGP_BALBcJ_G0035634.1 mouse_genomes_project X 33147980 33184120 - MGP_BALBcJ_P0095940 Lamp2 protein_coding protein_coding MGP_BALBcJ_T0095941.1 MGP_BALBcJ_G0035634.1 mouse_genomes_project X 33158341 33170814 - Lamp2 protein_coding retained_intron MGP_BALBcJ_T0095942.1 MGP_BALBcJ_G0035634.1 mouse_genomes_project X 33180546 33184080 - Lamp2 protein_coding processed_transcript MGP_BALBcJ_T0096906.1 MGP_BALBcJ_G0035892.1 mouse_genomes_project X 91385286 91460143 + MGP_BALBcJ_P0096906 Msn protein_coding protein_coding MGP_BALBcJ_T0096907.1 MGP_BALBcJ_G0035892.1 mouse_genomes_project X 91385301 91445631 + Msn protein_coding processed_transcript MGP_BALBcJ_T0096908.1 MGP_BALBcJ_G0035892.1 mouse_genomes_project X 91385341 91443551 + Msn protein_coding processed_transcript MGP_BALBcJ_T0096188.1 MGP_BALBcJ_G0035714.1 mouse_genomes_project X 52019499 52023123 + MGP_BALBcJ_P0096188 Htatsf1 protein_coding protein_coding MGP_BALBcJ_T0096189.1 MGP_BALBcJ_G0035714.1 mouse_genomes_project X 52019531 52033100 + MGP_BALBcJ_P0096189 Htatsf1 protein_coding protein_coding MGP_BALBcJ_T0096190.1 MGP_BALBcJ_G0035714.1 mouse_genomes_project X 52019814 52023121 + Htatsf1 protein_coding retained_intron MGP_BALBcJ_T0016534.1 MGP_BALBcJ_G0014631.1 mouse_genomes_project X 98430416 98431723 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011743.1 MGP_BALBcJ_G0009868.1 mouse_genomes_project X 98839409 98839477 - Gm27733 misc_RNA misc_RNA MGP_BALBcJ_T0005564.1 MGP_BALBcJ_G0004691.1 mouse_genomes_project X 64316342 64321016 - Gm14705 antisense antisense MGP_BALBcJ_T0005565.1 MGP_BALBcJ_G0004691.1 mouse_genomes_project X 64317704 64320088 - Gm14705 antisense antisense MGP_BALBcJ_T0016207.1 MGP_BALBcJ_G0014304.1 mouse_genomes_project X 15261793 15263120 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016303.1 MGP_BALBcJ_G0014400.1 mouse_genomes_project X 52608084 52609260 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011140.1 MGP_BALBcJ_G0009265.1 mouse_genomes_project X 61836833 61836904 - Mir741 miRNA miRNA MGP_BALBcJ_T0096228.1 MGP_BALBcJ_G0035725.1 mouse_genomes_project X 54983123 55110751 - MGP_BALBcJ_P0096228 Mcf2 protein_coding protein_coding MGP_BALBcJ_T0096229.1 MGP_BALBcJ_G0035725.1 mouse_genomes_project X 54983123 55074105 - MGP_BALBcJ_P0096229 Mcf2 protein_coding protein_coding MGP_BALBcJ_T0096230.1 MGP_BALBcJ_G0035725.1 mouse_genomes_project X 54983126 55074048 - MGP_BALBcJ_P0096230 Mcf2 protein_coding protein_coding MGP_BALBcJ_T0095754.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15341899 15375207 + MGP_BALBcJ_P0095754 Rbm10 protein_coding protein_coding MGP_BALBcJ_T0095755.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15342018 15375220 + MGP_BALBcJ_P0095755 Rbm10 protein_coding protein_coding MGP_BALBcJ_T0095756.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15342179 15375220 + MGP_BALBcJ_P0095756 Rbm10 protein_coding protein_coding MGP_BALBcJ_T0095757.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15342181 15373425 + Rbm10 protein_coding processed_transcript MGP_BALBcJ_T0095758.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15344429 15375214 + MGP_BALBcJ_P0095758 Rbm10 protein_coding protein_coding MGP_BALBcJ_T0095759.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15344429 15375214 + MGP_BALBcJ_P0095759 Rbm10 protein_coding protein_coding MGP_BALBcJ_T0095760.1 MGP_BALBcJ_G0035563.1 mouse_genomes_project X 15344429 15375214 + MGP_BALBcJ_P0095760 Rbm10 protein_coding protein_coding MGP_BALBcJ_T0016500.1 MGP_BALBcJ_G0014597.1 mouse_genomes_project X 92221836 92222371 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016830.1 MGP_BALBcJ_G0014927.1 mouse_genomes_project X 155974847 155974977 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011106.1 MGP_BALBcJ_G0009231.1 mouse_genomes_project X 31116447 31116584 - Gm44485 miRNA miRNA MGP_BALBcJ_T0096133.1 MGP_BALBcJ_G0035690.1 mouse_genomes_project X 47871752 47898094 - MGP_BALBcJ_P0096133 Fam122b protein_coding protein_coding MGP_BALBcJ_T0096134.1 MGP_BALBcJ_G0035690.1 mouse_genomes_project X 47871762 47897308 - MGP_BALBcJ_P0096134 Fam122b protein_coding protein_coding MGP_BALBcJ_T0096135.1 MGP_BALBcJ_G0035690.1 mouse_genomes_project X 47872083 47898087 - MGP_BALBcJ_P0096135 Fam122b protein_coding protein_coding MGP_BALBcJ_T0096136.1 MGP_BALBcJ_G0035690.1 mouse_genomes_project X 47873199 47898094 - Fam122b protein_coding processed_transcript MGP_BALBcJ_T0005593.1 MGP_BALBcJ_G0004713.1 mouse_genomes_project X 157146716 157147271 + Gm15202 antisense antisense MGP_BALBcJ_T0096742.1 MGP_BALBcJ_G0035835.1 mouse_genomes_project X 71714433 71734606 - MGP_BALBcJ_P0096742 Cldn34d protein_coding protein_coding MGP_BALBcJ_T0096766.1 MGP_BALBcJ_G0035846.1 mouse_genomes_project X 73796704 73798343 + MGP_BALBcJ_P0096766 Fam47c protein_coding protein_coding MGP_BALBcJ_T0016501.1 MGP_BALBcJ_G0014598.1 mouse_genomes_project X 92337161 92337966 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016779.1 MGP_BALBcJ_G0014876.1 mouse_genomes_project X 146788385 146789300 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095833.1 MGP_BALBcJ_G0035585.1 mouse_genomes_project X 30609435 30806830 + MGP_BALBcJ_P0095833 Dock11 protein_coding protein_coding MGP_BALBcJ_T0095834.1 MGP_BALBcJ_G0035585.1 mouse_genomes_project X 30673305 30806824 + MGP_BALBcJ_P0095834 Dock11 protein_coding protein_coding MGP_BALBcJ_T0095835.1 MGP_BALBcJ_G0035585.1 mouse_genomes_project X 30700839 30712510 + Dock11 protein_coding retained_intron MGP_BALBcJ_T0095836.1 MGP_BALBcJ_G0035585.1 mouse_genomes_project X 30740195 30745582 + Dock11 protein_coding retained_intron MGP_BALBcJ_T0095837.1 MGP_BALBcJ_G0035585.1 mouse_genomes_project X 30770046 30806495 + MGP_BALBcJ_P0095837 Dock11 protein_coding protein_coding MGP_BALBcJ_T0016450.1 MGP_BALBcJ_G0014547.1 mouse_genomes_project X 84062583 84063749 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102889.1 MGP_BALBcJ_G0040704.1 mouse_genomes_project X 148294559 148295724 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0095645.1 MGP_BALBcJ_G0035528.1 mouse_genomes_project X 4613755 4614336 + MGP_BALBcJ_P0095645 Hypm protein_coding protein_coding MGP_BALBcJ_T0097098.1 MGP_BALBcJ_G0035937.1 mouse_genomes_project X 97380830 97382805 - MGP_BALBcJ_P0097098 protein_coding protein_coding MGP_BALBcJ_T0096553.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279524 69282474 + MGP_BALBcJ_P0096553 protein_coding protein_coding MGP_BALBcJ_T0096554.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279570 69281476 + protein_coding processed_transcript MGP_BALBcJ_T0096555.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279572 69282475 + MGP_BALBcJ_P0096555 protein_coding protein_coding MGP_BALBcJ_T0096556.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279576 69282475 + MGP_BALBcJ_P0096556 protein_coding protein_coding MGP_BALBcJ_T0096557.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279668 69280936 + protein_coding retained_intron MGP_BALBcJ_T0096558.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279691 69282424 + MGP_BALBcJ_P0096558 protein_coding protein_coding MGP_BALBcJ_T0096559.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69279698 69281638 + protein_coding retained_intron MGP_BALBcJ_T0096560.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69280121 69282383 + protein_coding retained_intron MGP_BALBcJ_T0096561.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69280154 69280956 + protein_coding retained_intron MGP_BALBcJ_T0096562.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69280455 69281126 + protein_coding retained_intron MGP_BALBcJ_T0096563.1 MGP_BALBcJ_G0035802.1 mouse_genomes_project X 69280549 69281519 + protein_coding retained_intron MGP_BALBcJ_T0097510.1 MGP_BALBcJ_G0036080.1 mouse_genomes_project X 132231340 132234547 + MGP_BALBcJ_P0097510 Zcchc18 protein_coding protein_coding MGP_BALBcJ_T0097511.1 MGP_BALBcJ_G0036080.1 mouse_genomes_project X 132231344 132234285 + MGP_BALBcJ_P0097511 Zcchc18 protein_coding protein_coding MGP_BALBcJ_T0097512.1 MGP_BALBcJ_G0036080.1 mouse_genomes_project X 132231483 132236641 + MGP_BALBcJ_P0097512 Zcchc18 protein_coding protein_coding MGP_BALBcJ_T0002471.1 MGP_BALBcJ_G0002380.1 mouse_genomes_project X 36861004 36863186 - TEC TEC MGP_BALBcJ_T0097837.1 MGP_BALBcJ_G0036155.1 mouse_genomes_project X 147764232 147926537 - MGP_BALBcJ_P0097837 Shroom2 protein_coding protein_coding MGP_BALBcJ_T0097838.1 MGP_BALBcJ_G0036155.1 mouse_genomes_project X 147764715 147797264 - Shroom2 protein_coding processed_transcript MGP_BALBcJ_T0097839.1 MGP_BALBcJ_G0036155.1 mouse_genomes_project X 147764715 147926541 - MGP_BALBcJ_P0097839 Shroom2 protein_coding protein_coding MGP_BALBcJ_T0097840.1 MGP_BALBcJ_G0036155.1 mouse_genomes_project X 147767251 147827434 - Shroom2 protein_coding processed_transcript MGP_BALBcJ_T0097841.1 MGP_BALBcJ_G0036155.1 mouse_genomes_project X 147773641 147796645 - Shroom2 protein_coding processed_transcript MGP_BALBcJ_T0097842.1 MGP_BALBcJ_G0036155.1 mouse_genomes_project X 147773850 147796831 - Shroom2 protein_coding processed_transcript MGP_BALBcJ_T0016517.1 MGP_BALBcJ_G0014614.1 mouse_genomes_project X 96481560 96481829 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005582.1 MGP_BALBcJ_G0004707.1 mouse_genomes_project X 139571073 139591518 + antisense antisense MGP_BALBcJ_T0005583.1 MGP_BALBcJ_G0004707.1 mouse_genomes_project X 139585485 139591515 + antisense antisense MGP_BALBcJ_T0095488.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2320812 2325133 + MGP_BALBcJ_P0095488 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095489.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321059 2327041 + MGP_BALBcJ_P0095489 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095490.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321079 2326831 + MGP_BALBcJ_P0095490 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095491.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321088 2327042 + MGP_BALBcJ_P0095491 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095492.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321089 2327023 + MGP_BALBcJ_P0095492 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095493.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321089 2325133 + MGP_BALBcJ_P0095493 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095494.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321099 2326791 + MGP_BALBcJ_P0095494 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095495.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321194 2323132 + MGP_BALBcJ_P0095495 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095496.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321196 2325117 + MGP_BALBcJ_P0095496 Wdr45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095497.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321201 2325132 + MGP_BALBcJ_P0095497 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095498.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321572 2325173 + Wdr45 protein_coding processed_transcript MGP_BALBcJ_T0095499.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2321766 2326844 + MGP_BALBcJ_P0095499 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095500.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2322171 2324868 + MGP_BALBcJ_P0095500 Wdr45 protein_coding protein_coding MGP_BALBcJ_T0095501.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2322385 2324721 + Wdr45 protein_coding processed_transcript MGP_BALBcJ_T0095502.1 MGP_BALBcJ_G0035494.1 mouse_genomes_project X 2325413 2326331 + Wdr45 protein_coding processed_transcript MGP_BALBcJ_T0097435.1 MGP_BALBcJ_G0036051.1 mouse_genomes_project X 130008636 130020427 - Nxf2 protein_coding retained_intron MGP_BALBcJ_T0097436.1 MGP_BALBcJ_G0036051.1 mouse_genomes_project X 130008638 130028611 - MGP_BALBcJ_P0097436 Nxf2 protein_coding protein_coding MGP_BALBcJ_T0097437.1 MGP_BALBcJ_G0036051.1 mouse_genomes_project X 130008638 130028611 - MGP_BALBcJ_P0097437 Nxf2 protein_coding protein_coding MGP_BALBcJ_T0097438.1 MGP_BALBcJ_G0036051.1 mouse_genomes_project X 130008638 130027753 - MGP_BALBcJ_P0097438 Nxf2 protein_coding protein_coding MGP_BALBcJ_T0016677.1 MGP_BALBcJ_G0014774.1 mouse_genomes_project X 129071802 129073431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100279.1 MGP_BALBcJ_G0038315.1 mouse_genomes_project X 102028485 102028647 - Gm24622 snRNA snRNA MGP_BALBcJ_T0016521.1 MGP_BALBcJ_G0014618.1 mouse_genomes_project X 97035390 97035897 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011767.1 MGP_BALBcJ_G0009892.1 mouse_genomes_project X 164592264 164592433 + Gm27980 misc_RNA misc_RNA MGP_BALBcJ_T0095471.1 MGP_BALBcJ_G0035489.1 mouse_genomes_project X 2230982 2246302 + MGP_BALBcJ_P0095471 Syp protein_coding protein_coding MGP_BALBcJ_T0095472.1 MGP_BALBcJ_G0035489.1 mouse_genomes_project X 2231149 2239807 + Syp protein_coding retained_intron MGP_BALBcJ_T0095473.1 MGP_BALBcJ_G0035489.1 mouse_genomes_project X 2231233 2236732 + MGP_BALBcJ_P0095473 Syp protein_coding protein_coding MGP_BALBcJ_T0095474.1 MGP_BALBcJ_G0035489.1 mouse_genomes_project X 2231816 2236721 + Syp protein_coding processed_transcript MGP_BALBcJ_T0095475.1 MGP_BALBcJ_G0035489.1 mouse_genomes_project X 2232272 2236680 + Syp protein_coding retained_intron MGP_BALBcJ_T0095476.1 MGP_BALBcJ_G0035489.1 mouse_genomes_project X 2236346 2237471 + Syp protein_coding retained_intron MGP_BALBcJ_T0096673.1 MGP_BALBcJ_G0035817.1 mouse_genomes_project X 69576665 69577601 - MGP_BALBcJ_P0096673 Olfr1326-ps1 protein_coding protein_coding MGP_BALBcJ_T0016187.1 MGP_BALBcJ_G0014284.1 mouse_genomes_project X 11051717 11052104 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016369.1 MGP_BALBcJ_G0014466.1 mouse_genomes_project X 65525319 65525812 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016644.1 MGP_BALBcJ_G0014741.1 mouse_genomes_project X 116325942 116327532 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011180.1 MGP_BALBcJ_G0009305.1 mouse_genomes_project X 111175209 111175285 + Gm24683 miRNA miRNA MGP_BALBcJ_T0096564.1 MGP_BALBcJ_G0035803.1 mouse_genomes_project X 69282555 69291040 - MGP_BALBcJ_P0096564 Dnase1l1 protein_coding protein_coding MGP_BALBcJ_T0096565.1 MGP_BALBcJ_G0035803.1 mouse_genomes_project X 69282556 69291641 - MGP_BALBcJ_P0096565 Dnase1l1 protein_coding protein_coding MGP_BALBcJ_T0096566.1 MGP_BALBcJ_G0035803.1 mouse_genomes_project X 69282657 69290902 - MGP_BALBcJ_P0096566 Dnase1l1 protein_coding protein_coding MGP_BALBcJ_T0096567.1 MGP_BALBcJ_G0035803.1 mouse_genomes_project X 69283311 69290979 - MGP_BALBcJ_P0096567 Dnase1l1 protein_coding protein_coding MGP_BALBcJ_T0096568.1 MGP_BALBcJ_G0035803.1 mouse_genomes_project X 69283706 69286151 - Dnase1l1 protein_coding retained_intron MGP_BALBcJ_T0096569.1 MGP_BALBcJ_G0035803.1 mouse_genomes_project X 69286089 69290930 - Dnase1l1 protein_coding retained_intron MGP_BALBcJ_T0016755.1 MGP_BALBcJ_G0014852.1 mouse_genomes_project X 140705205 140705670 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097762.1 MGP_BALBcJ_G0036143.1 mouse_genomes_project X 146310748 146460053 + MGP_BALBcJ_P0097762 Wnk3 protein_coding unknown_likely_coding MGP_BALBcJ_T0097763.1 MGP_BALBcJ_G0036143.1 mouse_genomes_project X 146341404 146455047 + MGP_BALBcJ_P0097763 Wnk3 protein_coding protein_coding MGP_BALBcJ_T0097764.1 MGP_BALBcJ_G0036143.1 mouse_genomes_project X 146341466 146454989 + MGP_BALBcJ_P0097764 Wnk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097765.1 MGP_BALBcJ_G0036143.1 mouse_genomes_project X 146341466 146458166 + MGP_BALBcJ_P0097765 Wnk3 protein_coding protein_coding MGP_BALBcJ_T0097766.1 MGP_BALBcJ_G0036143.1 mouse_genomes_project X 146351142 146368532 + Wnk3 protein_coding processed_transcript MGP_BALBcJ_T0097767.1 MGP_BALBcJ_G0036143.1 mouse_genomes_project X 146434256 146460010 + Wnk3 protein_coding processed_transcript MGP_BALBcJ_T0097132.1 MGP_BALBcJ_G0035949.1 mouse_genomes_project X 98250574 98256034 - MGP_BALBcJ_P0097132 Dmrtc1a protein_coding protein_coding MGP_BALBcJ_T0097133.1 MGP_BALBcJ_G0035949.1 mouse_genomes_project X 98250580 98253831 - MGP_BALBcJ_P0097133 Dmrtc1a protein_coding protein_coding MGP_BALBcJ_T0097134.1 MGP_BALBcJ_G0035949.1 mouse_genomes_project X 98250580 98253920 - MGP_BALBcJ_P0097134 Dmrtc1a protein_coding protein_coding MGP_BALBcJ_T0097135.1 MGP_BALBcJ_G0035949.1 mouse_genomes_project X 98250580 98256049 - MGP_BALBcJ_P0097135 Dmrtc1a protein_coding protein_coding MGP_BALBcJ_T0016802.1 MGP_BALBcJ_G0014899.1 mouse_genomes_project X 152045743 152046026 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009418.1 MGP_BALBcJ_G0007547.1 mouse_genomes_project X 157056748 157067280 - Gm15205 lincRNA lincRNA MGP_BALBcJ_T0016584.1 MGP_BALBcJ_G0014681.1 mouse_genomes_project X 104394356 104395168 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016346.1 MGP_BALBcJ_G0014443.1 mouse_genomes_project X 60002078 60002981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016193.1 MGP_BALBcJ_G0014290.1 mouse_genomes_project X 12677300 12678137 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097318.1 MGP_BALBcJ_G0036014.1 mouse_genomes_project X 111493055 111517714 + MGP_BALBcJ_P0097318 Cpxcr1 protein_coding protein_coding MGP_BALBcJ_T0096678.1 MGP_BALBcJ_G0035820.1 mouse_genomes_project X 69946692 69966888 + MGP_BALBcJ_P0096678 protein_coding protein_coding MGP_BALBcJ_T0101806.1 MGP_BALBcJ_G0039743.1 mouse_genomes_project X 125493410 125494119 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0096011.1 MGP_BALBcJ_G0035649.1 mouse_genomes_project X 39065757 39068642 - MGP_BALBcJ_P0096011 Dcaf12l2 protein_coding protein_coding MGP_BALBcJ_T0016438.1 MGP_BALBcJ_G0014535.1 mouse_genomes_project X 81267494 81269112 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011156.1 MGP_BALBcJ_G0009281.1 mouse_genomes_project X 67527839 67527946 - Mir767 miRNA miRNA MGP_BALBcJ_T0098108.1 MGP_BALBcJ_G0036230.1 mouse_genomes_project X 161727226 161750361 - MGP_BALBcJ_P0098108 Rab9 protein_coding protein_coding MGP_BALBcJ_T0098109.1 MGP_BALBcJ_G0036230.1 mouse_genomes_project X 161727722 161750140 - MGP_BALBcJ_P0098109 Rab9 protein_coding protein_coding MGP_BALBcJ_T0098110.1 MGP_BALBcJ_G0036230.1 mouse_genomes_project X 161728448 161745929 - MGP_BALBcJ_P0098110 Rab9 protein_coding protein_coding MGP_BALBcJ_T0097291.1 MGP_BALBcJ_G0036004.1 mouse_genomes_project X 107624684 107642212 - MGP_BALBcJ_P0097291 Satl1 protein_coding protein_coding MGP_BALBcJ_T0097292.1 MGP_BALBcJ_G0036004.1 mouse_genomes_project X 107624686 107643169 - MGP_BALBcJ_P0097292 Satl1 protein_coding protein_coding MGP_BALBcJ_T0096592.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69304069 69315040 + MGP_BALBcJ_P0096592 Atp6ap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0096593.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306387 69315068 + MGP_BALBcJ_P0096593 Atp6ap1 protein_coding protein_coding MGP_BALBcJ_T0096594.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306433 69312721 + MGP_BALBcJ_P0096594 Atp6ap1 protein_coding protein_coding MGP_BALBcJ_T0096595.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306452 69313777 + MGP_BALBcJ_P0096595 Atp6ap1 protein_coding protein_coding MGP_BALBcJ_T0096596.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306453 69315036 + MGP_BALBcJ_P0096596 Atp6ap1 protein_coding protein_coding MGP_BALBcJ_T0096597.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306467 69311705 + Atp6ap1 protein_coding retained_intron MGP_BALBcJ_T0096598.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306523 69313810 + MGP_BALBcJ_P0096598 Atp6ap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096599.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69306552 69312861 + MGP_BALBcJ_P0096599 Atp6ap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0096600.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69312270 69313580 + Atp6ap1 protein_coding processed_transcript MGP_BALBcJ_T0096601.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69312899 69314360 + Atp6ap1 protein_coding retained_intron MGP_BALBcJ_T0096602.1 MGP_BALBcJ_G0035805.1 mouse_genomes_project X 69313835 69314362 + MGP_BALBcJ_P0096602 Atp6ap1 protein_coding protein_coding MGP_BALBcJ_T0016453.1 MGP_BALBcJ_G0014550.1 mouse_genomes_project X 84414538 84414878 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101990.1 MGP_BALBcJ_G0039832.1 mouse_genomes_project X 31986810 32127430 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0011735.1 MGP_BALBcJ_G0009860.1 mouse_genomes_project X 44631229 44631524 + Gm23385 misc_RNA misc_RNA MGP_BALBcJ_T0016695.1 MGP_BALBcJ_G0014792.1 mouse_genomes_project X 132129173 132129591 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016311.1 MGP_BALBcJ_G0014408.1 mouse_genomes_project X 53566454 53567343 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011155.1 MGP_BALBcJ_G0009280.1 mouse_genomes_project X 67197058 67197143 - Mir452 miRNA miRNA MGP_BALBcJ_T0096146.1 MGP_BALBcJ_G0035697.1 mouse_genomes_project X 48320689 48324418 + MGP_BALBcJ_P0096146 Gm14597 protein_coding protein_coding MGP_BALBcJ_T0018585.1 MGP_BALBcJ_G0015716.1 mouse_genomes_project X 47349211 47351242 - Kis2 processed_transcript processed_transcript MGP_BALBcJ_T0018586.1 MGP_BALBcJ_G0015716.1 mouse_genomes_project X 47349211 47351242 - Kis2 processed_transcript processed_transcript MGP_BALBcJ_T0018587.1 MGP_BALBcJ_G0015716.1 mouse_genomes_project X 47349211 47351242 - Kis2 processed_transcript processed_transcript MGP_BALBcJ_T0018588.1 MGP_BALBcJ_G0015716.1 mouse_genomes_project X 47349213 47351609 - Kis2 processed_transcript processed_transcript MGP_BALBcJ_T0016140.1 MGP_BALBcJ_G0014237.1 mouse_genomes_project X 591498 591738 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096269.1 MGP_BALBcJ_G0035743.1 mouse_genomes_project X 63718563 63775153 + MGP_BALBcJ_P0096269 Fmr1nb protein_coding protein_coding MGP_BALBcJ_T0096270.1 MGP_BALBcJ_G0035743.1 mouse_genomes_project X 63718605 63775153 + MGP_BALBcJ_P0096270 Fmr1nb protein_coding protein_coding MGP_BALBcJ_T0096271.1 MGP_BALBcJ_G0035743.1 mouse_genomes_project X 63718658 63775153 + MGP_BALBcJ_P0096271 Fmr1nb protein_coding protein_coding MGP_BALBcJ_T0096321.1 MGP_BALBcJ_G0035755.1 mouse_genomes_project X 66636439 66642003 + MGP_BALBcJ_P0096321 Gpr50 protein_coding protein_coding MGP_BALBcJ_T0096322.1 MGP_BALBcJ_G0035755.1 mouse_genomes_project X 66636738 66640138 + Gpr50 protein_coding processed_transcript MGP_BALBcJ_T0096323.1 MGP_BALBcJ_G0035755.1 mouse_genomes_project X 66636738 66640138 + Gpr50 protein_coding processed_transcript MGP_BALBcJ_T0016392.1 MGP_BALBcJ_G0014489.1 mouse_genomes_project X 70997157 70998469 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016817.1 MGP_BALBcJ_G0014914.1 mouse_genomes_project X 153776997 153777575 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096102.1 MGP_BALBcJ_G0035678.1 mouse_genomes_project X 45511148 45562169 - MGP_BALBcJ_P0096102 Frmd7 protein_coding protein_coding MGP_BALBcJ_T0096103.1 MGP_BALBcJ_G0035678.1 mouse_genomes_project X 45511148 45562169 - MGP_BALBcJ_P0096103 Frmd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0016216.1 MGP_BALBcJ_G0014313.1 mouse_genomes_project X 17199758 17200301 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011737.1 MGP_BALBcJ_G0009862.1 mouse_genomes_project X 61511682 61511947 + Gm23028 misc_RNA misc_RNA MGP_BALBcJ_T0098014.1 MGP_BALBcJ_G0036205.1 mouse_genomes_project X 158087208 158126138 - MGP_BALBcJ_P0098014 Syap1 protein_coding protein_coding MGP_BALBcJ_T0098015.1 MGP_BALBcJ_G0036205.1 mouse_genomes_project X 158093272 158098624 - Syap1 protein_coding retained_intron MGP_BALBcJ_T0102845.1 MGP_BALBcJ_G0040660.1 mouse_genomes_project X 7952172 7952310 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100263.1 MGP_BALBcJ_G0038299.1 mouse_genomes_project X 67556201 67556308 + Gm23461 snRNA snRNA MGP_BALBcJ_T0097239.1 MGP_BALBcJ_G0035985.1 mouse_genomes_project X 103091682 103112644 + MGP_BALBcJ_P0097239 Tbx22 protein_coding protein_coding MGP_BALBcJ_T0097240.1 MGP_BALBcJ_G0035985.1 mouse_genomes_project X 103091682 103104892 + MGP_BALBcJ_P0097240 Tbx22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097241.1 MGP_BALBcJ_G0035985.1 mouse_genomes_project X 103100230 103110566 + MGP_BALBcJ_P0097241 Tbx22 protein_coding protein_coding MGP_BALBcJ_T0097242.1 MGP_BALBcJ_G0035985.1 mouse_genomes_project X 103102681 103112647 + MGP_BALBcJ_P0097242 Tbx22 protein_coding protein_coding MGP_BALBcJ_T0097243.1 MGP_BALBcJ_G0035985.1 mouse_genomes_project X 103102733 103111291 + MGP_BALBcJ_P0097243 Tbx22 protein_coding protein_coding MGP_BALBcJ_T0016545.1 MGP_BALBcJ_G0014642.1 mouse_genomes_project X 98907944 98908169 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005550.1 MGP_BALBcJ_G0004679.1 mouse_genomes_project X 2765440 2767988 + Rbm3os antisense antisense MGP_BALBcJ_T0005551.1 MGP_BALBcJ_G0004679.1 mouse_genomes_project X 2765940 2767700 + Rbm3os antisense antisense MGP_BALBcJ_T0100264.1 MGP_BALBcJ_G0038300.1 mouse_genomes_project X 70055083 70055190 - Gm25629 snRNA snRNA MGP_BALBcJ_T0095680.1 MGP_BALBcJ_G0035539.1 mouse_genomes_project X 7433768 7452776 - MGP_BALBcJ_P0095680 1810030O07Rik protein_coding protein_coding MGP_BALBcJ_T0096287.1 MGP_BALBcJ_G0035750.1 mouse_genomes_project X 66003026 66108051 + MGP_BALBcJ_P0096287 Mamld1 protein_coding protein_coding MGP_BALBcJ_T0096288.1 MGP_BALBcJ_G0035750.1 mouse_genomes_project X 66003026 66109390 + MGP_BALBcJ_P0096288 Mamld1 protein_coding protein_coding MGP_BALBcJ_T0095915.1 MGP_BALBcJ_G0035622.1 mouse_genomes_project X 32557273 32561362 - MGP_BALBcJ_P0095915 Rhox8 protein_coding protein_coding MGP_BALBcJ_T0095712.1 MGP_BALBcJ_G0035546.1 mouse_genomes_project X 8465153 8475160 + MGP_BALBcJ_P0095712 Gpr82 protein_coding protein_coding MGP_BALBcJ_T0101801.1 MGP_BALBcJ_G0039739.1 mouse_genomes_project X 98903914 98904806 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0016221.1 MGP_BALBcJ_G0014318.1 mouse_genomes_project X 30942967 30943342 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097829.1 MGP_BALBcJ_G0036152.1 mouse_genomes_project X 147477918 147483492 - Tspyl2 protein_coding retained_intron MGP_BALBcJ_T0097830.1 MGP_BALBcJ_G0036152.1 mouse_genomes_project X 147477918 147483492 - Tspyl2 protein_coding retained_intron MGP_BALBcJ_T0097831.1 MGP_BALBcJ_G0036152.1 mouse_genomes_project X 147477921 147483492 - MGP_BALBcJ_P0097831 Tspyl2 protein_coding protein_coding MGP_BALBcJ_T0097832.1 MGP_BALBcJ_G0036152.1 mouse_genomes_project X 147480367 147482911 - MGP_BALBcJ_P0097832 Tspyl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0097833.1 MGP_BALBcJ_G0036152.1 mouse_genomes_project X 147481331 147482868 - Tspyl2 protein_coding retained_intron MGP_BALBcJ_T0016437.1 MGP_BALBcJ_G0014534.1 mouse_genomes_project X 80953110 80953624 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011742.1 MGP_BALBcJ_G0009867.1 mouse_genomes_project X 95995975 95996303 + Gm22160 misc_RNA misc_RNA MGP_BALBcJ_T0016666.1 MGP_BALBcJ_G0014763.1 mouse_genomes_project X 125984265 125985659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095917.1 MGP_BALBcJ_G0035624.1 mouse_genomes_project X 32590840 32597803 - MGP_BALBcJ_P0095917 protein_coding protein_coding MGP_BALBcJ_T0095918.1 MGP_BALBcJ_G0035624.1 mouse_genomes_project X 32590840 32597737 - MGP_BALBcJ_P0095918 protein_coding protein_coding MGP_BALBcJ_T0011151.1 MGP_BALBcJ_G0009276.1 mouse_genomes_project X 62961914 62961992 - Mir547 miRNA miRNA MGP_BALBcJ_T0011134.1 MGP_BALBcJ_G0009259.1 mouse_genomes_project X 61817603 61817665 - Mir743 miRNA miRNA MGP_BALBcJ_T0016576.1 MGP_BALBcJ_G0014673.1 mouse_genomes_project X 102700425 102701373 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011752.1 MGP_BALBcJ_G0009877.1 mouse_genomes_project X 122363032 122363307 + Gm22636 misc_RNA misc_RNA MGP_BALBcJ_T0016387.1 MGP_BALBcJ_G0014484.1 mouse_genomes_project X 70067983 70068999 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096739.1 MGP_BALBcJ_G0035833.1 mouse_genomes_project X 71386585 71390020 + MGP_BALBcJ_P0096739 protein_coding protein_coding MGP_BALBcJ_T0101522.1 MGP_BALBcJ_G0039558.1 mouse_genomes_project X 62564389 62564498 - Gm26276 snoRNA snoRNA MGP_BALBcJ_T0016619.1 MGP_BALBcJ_G0014716.1 mouse_genomes_project X 110731707 110732097 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096773.1 MGP_BALBcJ_G0035848.1 mouse_genomes_project X 74696165 74741311 - MGP_BALBcJ_P0096773 Mageb16 protein_coding protein_coding MGP_BALBcJ_T0016550.1 MGP_BALBcJ_G0014647.1 mouse_genomes_project X 99168396 99168704 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096781.1 MGP_BALBcJ_G0035852.1 mouse_genomes_project X 78370802 78372130 - MGP_BALBcJ_P0096781 Tsga8 protein_coding protein_coding MGP_BALBcJ_T0098091.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161498752 161649134 + MGP_BALBcJ_P0098091 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098092.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161498813 161649134 + MGP_BALBcJ_P0098092 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098093.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161498813 161649134 + MGP_BALBcJ_P0098093 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098094.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161649134 + MGP_BALBcJ_P0098094 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098095.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161649134 + MGP_BALBcJ_P0098095 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098096.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161649134 + MGP_BALBcJ_P0098096 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098097.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161649134 + MGP_BALBcJ_P0098097 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098098.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161644147 + MGP_BALBcJ_P0098098 Gpm6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098099.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161644147 + MGP_BALBcJ_P0098099 Gpm6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098100.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161649134 + MGP_BALBcJ_P0098100 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098101.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604800 161649134 + MGP_BALBcJ_P0098101 Gpm6b protein_coding protein_coding MGP_BALBcJ_T0098102.1 MGP_BALBcJ_G0036227.1 mouse_genomes_project X 161604950 161633430 + Gpm6b protein_coding retained_intron MGP_BALBcJ_T0016604.1 MGP_BALBcJ_G0014701.1 mouse_genomes_project X 108240800 108241899 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095904.1 MGP_BALBcJ_G0035618.1 mouse_genomes_project X 32403090 32408083 - MGP_BALBcJ_P0095904 Rhox2d protein_coding protein_coding MGP_BALBcJ_T0016575.1 MGP_BALBcJ_G0014672.1 mouse_genomes_project X 102654443 102654914 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0096087.1 MGP_BALBcJ_G0035671.1 mouse_genomes_project X 44315195 44316155 + MGP_BALBcJ_P0096087 Olfr1320 protein_coding protein_coding MGP_BALBcJ_T0096143.1 MGP_BALBcJ_G0035694.1 mouse_genomes_project X 48230712 48231883 + MGP_BALBcJ_P0096143 Cxx1b protein_coding protein_coding MGP_BALBcJ_T0016746.1 MGP_BALBcJ_G0014843.1 mouse_genomes_project X 139382521 139382677 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016590.1 MGP_BALBcJ_G0014687.1 mouse_genomes_project X 105986164 105988793 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016612.1 MGP_BALBcJ_G0014709.1 mouse_genomes_project X 109972586 109972793 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102882.1 MGP_BALBcJ_G0040697.1 mouse_genomes_project X 101775494 101809228 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0095846.1 MGP_BALBcJ_G0035589.1 mouse_genomes_project X 31142229 31143408 + MGP_BALBcJ_P0095846 protein_coding protein_coding MGP_BALBcJ_T0005567.1 MGP_BALBcJ_G0004693.1 mouse_genomes_project X 66407364 66438040 + Gm16189 antisense antisense MGP_BALBcJ_T0011745.1 MGP_BALBcJ_G0009870.1 mouse_genomes_project X 98858677 98858758 + Gm27520 misc_RNA misc_RNA MGP_BALBcJ_T0016382.1 MGP_BALBcJ_G0014479.1 mouse_genomes_project X 69510696 69517761 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097634.1 MGP_BALBcJ_G0036122.1 mouse_genomes_project X 138398208 138504748 - MGP_BALBcJ_P0097634 Chrdl1 protein_coding protein_coding MGP_BALBcJ_T0097635.1 MGP_BALBcJ_G0036122.1 mouse_genomes_project X 138398218 138508906 - MGP_BALBcJ_P0097635 Chrdl1 protein_coding protein_coding MGP_BALBcJ_T0097636.1 MGP_BALBcJ_G0036122.1 mouse_genomes_project X 138409699 138508828 - MGP_BALBcJ_P0097636 Chrdl1 protein_coding protein_coding MGP_BALBcJ_T0097637.1 MGP_BALBcJ_G0036122.1 mouse_genomes_project X 138409701 138508540 - MGP_BALBcJ_P0097637 Chrdl1 protein_coding protein_coding MGP_BALBcJ_T0011762.1 MGP_BALBcJ_G0009887.1 mouse_genomes_project X 148084720 148085030 - Gm26035 misc_RNA misc_RNA MGP_BALBcJ_T0016357.1 MGP_BALBcJ_G0014454.1 mouse_genomes_project X 62978695 62978998 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095728.1 MGP_BALBcJ_G0035554.1 mouse_genomes_project X 12899142 12899987 + MGP_BALBcJ_P0095728 Dusp21 protein_coding protein_coding MGP_BALBcJ_T0016233.1 MGP_BALBcJ_G0014330.1 mouse_genomes_project X 33838529 33838785 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016321.1 MGP_BALBcJ_G0014418.1 mouse_genomes_project X 55668353 55669413 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095583.1 MGP_BALBcJ_G0035512.1 mouse_genomes_project X 2677748 2691274 - MGP_BALBcJ_P0095583 Suv39h1 protein_coding protein_coding MGP_BALBcJ_T0095584.1 MGP_BALBcJ_G0035512.1 mouse_genomes_project X 2678003 2691135 - Suv39h1 protein_coding retained_intron MGP_BALBcJ_T0095585.1 MGP_BALBcJ_G0035512.1 mouse_genomes_project X 2678012 2690772 - MGP_BALBcJ_P0095585 Suv39h1 protein_coding protein_coding MGP_BALBcJ_T0095586.1 MGP_BALBcJ_G0035512.1 mouse_genomes_project X 2683986 2691243 - MGP_BALBcJ_P0095586 Suv39h1 protein_coding protein_coding MGP_BALBcJ_T0095587.1 MGP_BALBcJ_G0035512.1 mouse_genomes_project X 2687006 2690827 - Suv39h1 protein_coding retained_intron MGP_BALBcJ_T0096140.1 MGP_BALBcJ_G0035692.1 mouse_genomes_project X 47974243 47999434 - MGP_BALBcJ_P0096140 Mospd1 protein_coding protein_coding MGP_BALBcJ_T0096141.1 MGP_BALBcJ_G0035692.1 mouse_genomes_project X 47975006 47999452 - MGP_BALBcJ_P0096141 Mospd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0095729.1 MGP_BALBcJ_G0035555.1 mouse_genomes_project X 12916139 13034641 + MGP_BALBcJ_P0095729 Kdm6a protein_coding protein_coding MGP_BALBcJ_T0095730.1 MGP_BALBcJ_G0035555.1 mouse_genomes_project X 12916139 13034641 + MGP_BALBcJ_P0095730 Kdm6a protein_coding protein_coding MGP_BALBcJ_T0095731.1 MGP_BALBcJ_G0035555.1 mouse_genomes_project X 12916212 13013621 + Kdm6a protein_coding retained_intron MGP_BALBcJ_T0095732.1 MGP_BALBcJ_G0035555.1 mouse_genomes_project X 12916570 13033360 + MGP_BALBcJ_P0095732 Kdm6a protein_coding unknown_likely_coding MGP_BALBcJ_T0095733.1 MGP_BALBcJ_G0035555.1 mouse_genomes_project X 13029216 13032965 + Kdm6a protein_coding retained_intron MGP_BALBcJ_T0011754.1 MGP_BALBcJ_G0009879.1 mouse_genomes_project X 127692385 127692588 + Gm22143 misc_RNA misc_RNA MGP_BALBcJ_T0097921.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154469503 154619437 + MGP_BALBcJ_P0097921 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097922.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154514270 154568612 + MGP_BALBcJ_P0097922 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097923.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154514346 154623179 + MGP_BALBcJ_P0097923 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097924.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154514413 154584300 + MGP_BALBcJ_P0097924 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097925.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154514608 154584390 + MGP_BALBcJ_P0097925 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097926.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154534547 154582798 + MGP_BALBcJ_P0097926 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097927.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154560366 154586803 + MGP_BALBcJ_P0097927 Rps6ka3 protein_coding protein_coding MGP_BALBcJ_T0097928.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154617255 154618440 + Rps6ka3 protein_coding processed_transcript MGP_BALBcJ_T0097929.1 MGP_BALBcJ_G0036186.1 mouse_genomes_project X 154617340 154618675 + Rps6ka3 protein_coding retained_intron MGP_BALBcJ_T0016589.1 MGP_BALBcJ_G0014686.1 mouse_genomes_project X 105921031 105922175 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0097358.1 MGP_BALBcJ_G0036032.1 mouse_genomes_project X 128956852 128983378 - MGP_BALBcJ_P0097358 Sytl4 protein_coding protein_coding MGP_BALBcJ_T0097359.1 MGP_BALBcJ_G0036032.1 mouse_genomes_project X 128967589 129002977 - MGP_BALBcJ_P0097359 Sytl4 protein_coding protein_coding MGP_BALBcJ_T0097360.1 MGP_BALBcJ_G0036032.1 mouse_genomes_project X 128971447 128982133 - Sytl4 protein_coding processed_transcript MGP_BALBcJ_T0097361.1 MGP_BALBcJ_G0036032.1 mouse_genomes_project X 128973489 129002974 - MGP_BALBcJ_P0097361 Sytl4 protein_coding protein_coding MGP_BALBcJ_T0016603.1 MGP_BALBcJ_G0014700.1 mouse_genomes_project X 108163539 108164474 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016785.1 MGP_BALBcJ_G0014882.1 mouse_genomes_project X 148293429 148293961 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100286.1 MGP_BALBcJ_G0038322.1 mouse_genomes_project X 111401281 111401445 + Gm24624 snRNA snRNA MGP_BALBcJ_T0095718.1 MGP_BALBcJ_G0035549.1 mouse_genomes_project X 11384778 11451191 + MGP_BALBcJ_P0095718 Maoa protein_coding protein_coding MGP_BALBcJ_T0016530.1 MGP_BALBcJ_G0014627.1 mouse_genomes_project X 98362653 98363960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016154.1 MGP_BALBcJ_G0014251.1 mouse_genomes_project X 3283506 3283866 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011126.1 MGP_BALBcJ_G0009251.1 mouse_genomes_project X 47680661 47680760 - Mir351 miRNA miRNA MGP_BALBcJ_T0016318.1 MGP_BALBcJ_G0014415.1 mouse_genomes_project X 55511914 55513846 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016756.1 MGP_BALBcJ_G0014853.1 mouse_genomes_project X 140749120 140750068 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004377.1 MGP_BALBcJ_G0003818.1 mouse_genomes_project 3 139500167 139518941 - Gm15689 antisense antisense MGP_BALBcJ_T0014188.1 MGP_BALBcJ_G0012285.1 mouse_genomes_project 3 96858761 96859290 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101085.1 MGP_BALBcJ_G0039121.1 mouse_genomes_project 3 146319084 146319216 - Gm23131 snoRNA snoRNA MGP_BALBcJ_T0013898.1 MGP_BALBcJ_G0011995.1 mouse_genomes_project 3 8501020 8502034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099733.1 MGP_BALBcJ_G0037769.1 mouse_genomes_project 3 50730986 50731089 + Gm24851 snRNA snRNA MGP_BALBcJ_T0014156.1 MGP_BALBcJ_G0012253.1 mouse_genomes_project 3 90276740 90277132 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063743.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128649687 128653194 - MGP_BALBcJ_P0063743 Rpl34 protein_coding protein_coding MGP_BALBcJ_T0063744.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128649690 128650263 - Rpl34 protein_coding retained_intron MGP_BALBcJ_T0063745.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128649695 128653255 - MGP_BALBcJ_P0063745 Rpl34 protein_coding protein_coding MGP_BALBcJ_T0063746.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128649720 128653199 - Rpl34 protein_coding retained_intron MGP_BALBcJ_T0063747.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128649732 128653178 - MGP_BALBcJ_P0063747 Rpl34 protein_coding protein_coding MGP_BALBcJ_T0063748.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128651188 128653191 - MGP_BALBcJ_P0063748 Rpl34 protein_coding protein_coding MGP_BALBcJ_T0063749.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128651423 128653204 - Rpl34 protein_coding retained_intron MGP_BALBcJ_T0063750.1 MGP_BALBcJ_G0027854.1 mouse_genomes_project 3 128651694 128653203 - MGP_BALBcJ_P0063750 Rpl34 protein_coding protein_coding MGP_BALBcJ_T0099731.1 MGP_BALBcJ_G0037767.1 mouse_genomes_project 3 45912835 45913000 + Gm23511 snRNA snRNA MGP_BALBcJ_T0004385.1 MGP_BALBcJ_G0003825.1 mouse_genomes_project 3 150134663 150135608 + Gm43455 antisense antisense MGP_BALBcJ_T0004386.1 MGP_BALBcJ_G0003825.1 mouse_genomes_project 3 150134882 150135608 + Gm43455 antisense antisense MGP_BALBcJ_T0062096.1 MGP_BALBcJ_G0027479.1 mouse_genomes_project 3 89944836 89947607 - MGP_BALBcJ_P0062096 2210017I01Rik protein_coding protein_coding MGP_BALBcJ_T0001304.1 MGP_BALBcJ_G0001227.1 mouse_genomes_project 3 119916208 119919454 + TEC TEC MGP_BALBcJ_T0101087.1 MGP_BALBcJ_G0039123.1 mouse_genomes_project 3 151856349 151856472 + Gm25757 snoRNA snoRNA MGP_BALBcJ_T0001166.1 MGP_BALBcJ_G0001091.1 mouse_genomes_project 3 42269170 42271747 + TEC TEC MGP_BALBcJ_T0062206.1 MGP_BALBcJ_G0027530.1 mouse_genomes_project 3 92228406 92242277 - MGP_BALBcJ_P0062206 protein_coding protein_coding MGP_BALBcJ_T0062207.1 MGP_BALBcJ_G0027530.1 mouse_genomes_project 3 92228406 92242261 - MGP_BALBcJ_P0062207 protein_coding protein_coding MGP_BALBcJ_T0001292.1 MGP_BALBcJ_G0001215.1 mouse_genomes_project 3 116426939 116431069 + TEC TEC MGP_BALBcJ_T0014283.1 MGP_BALBcJ_G0012380.1 mouse_genomes_project 3 124330093 124330301 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014308.1 MGP_BALBcJ_G0012405.1 mouse_genomes_project 3 133089575 133090000 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063193.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106359357 106414528 + MGP_BALBcJ_P0063193 Wdr47 protein_coding protein_coding MGP_BALBcJ_T0063194.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106359430 106387240 + MGP_BALBcJ_P0063194 Wdr47 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063195.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106359467 106383962 + Wdr47 protein_coding retained_intron MGP_BALBcJ_T0063196.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106387436 106393240 + Wdr47 protein_coding processed_transcript MGP_BALBcJ_T0063197.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106387817 106396124 + Wdr47 protein_coding retained_intron MGP_BALBcJ_T0063198.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106391932 106401695 + Wdr47 protein_coding processed_transcript MGP_BALBcJ_T0063199.1 MGP_BALBcJ_G0027754.1 mouse_genomes_project 3 106395772 106406729 + Wdr47 protein_coding retained_intron MGP_BALBcJ_T0001260.1 MGP_BALBcJ_G0001183.1 mouse_genomes_project 3 92874997 92879603 + TEC TEC MGP_BALBcJ_T0063833.1 MGP_BALBcJ_G0027873.1 mouse_genomes_project 3 133093339 133152992 + MGP_BALBcJ_P0063833 Cenpe protein_coding protein_coding MGP_BALBcJ_T0063834.1 MGP_BALBcJ_G0027873.1 mouse_genomes_project 3 133121489 133125925 + MGP_BALBcJ_P0063834 Cenpe protein_coding protein_coding MGP_BALBcJ_T0063835.1 MGP_BALBcJ_G0027873.1 mouse_genomes_project 3 133138622 133139062 + Cenpe protein_coding retained_intron MGP_BALBcJ_T0063836.1 MGP_BALBcJ_G0027873.1 mouse_genomes_project 3 133139425 133145559 + Cenpe protein_coding retained_intron MGP_BALBcJ_T0063837.1 MGP_BALBcJ_G0027873.1 mouse_genomes_project 3 133150007 133150539 + Cenpe protein_coding retained_intron MGP_BALBcJ_T0014366.1 MGP_BALBcJ_G0012463.1 mouse_genomes_project 3 157544528 157544750 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007607.1 MGP_BALBcJ_G0006220.1 mouse_genomes_project 3 96608563 96612171 - 5730437C11Rik lincRNA lincRNA MGP_BALBcJ_T0062110.1 MGP_BALBcJ_G0027492.1 mouse_genomes_project 3 90122597 90124242 - MGP_BALBcJ_P0062110 Lce1j protein_coding protein_coding MGP_BALBcJ_T0062111.1 MGP_BALBcJ_G0027492.1 mouse_genomes_project 3 90122807 90123197 - MGP_BALBcJ_P0062111 Lce1j protein_coding protein_coding MGP_BALBcJ_T0064052.1 MGP_BALBcJ_G0027916.1 mouse_genomes_project 3 140618284 140636970 + MGP_BALBcJ_P0064052 Gtf2b protein_coding protein_coding MGP_BALBcJ_T0064053.1 MGP_BALBcJ_G0027916.1 mouse_genomes_project 3 140618462 140621654 + Gtf2b protein_coding retained_intron MGP_BALBcJ_T0007709.1 MGP_BALBcJ_G0006304.1 mouse_genomes_project 3 141093729 141107959 + A830019L24Rik lincRNA lincRNA MGP_BALBcJ_T0007710.1 MGP_BALBcJ_G0006304.1 mouse_genomes_project 3 141094204 141109847 + A830019L24Rik lincRNA lincRNA MGP_BALBcJ_T0063149.1 MGP_BALBcJ_G0027744.1 mouse_genomes_project 3 106015925 106040736 + MGP_BALBcJ_P0063149 Psma5 protein_coding protein_coding MGP_BALBcJ_T0063150.1 MGP_BALBcJ_G0027744.1 mouse_genomes_project 3 106029637 106040658 + MGP_BALBcJ_P0063150 Psma5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063052.1 MGP_BALBcJ_G0027720.1 mouse_genomes_project 3 105174128 105195372 - MGP_BALBcJ_P0063052 Kcnc4 protein_coding protein_coding MGP_BALBcJ_T0014017.1 MGP_BALBcJ_G0012114.1 mouse_genomes_project 3 48274281 48274600 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102462.1 MGP_BALBcJ_G0040278.1 mouse_genomes_project 3 61282086 61292535 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010535.1 MGP_BALBcJ_G0008660.1 mouse_genomes_project 3 125448248 125448317 + Mir302a miRNA miRNA MGP_BALBcJ_T0001242.1 MGP_BALBcJ_G0001165.1 mouse_genomes_project 3 74728025 74734406 - TEC TEC MGP_BALBcJ_T0014002.1 MGP_BALBcJ_G0012099.1 mouse_genomes_project 3 43991460 43992463 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064096.1 MGP_BALBcJ_G0027925.1 mouse_genomes_project 3 142760696 142896905 - MGP_BALBcJ_P0064096 Clca4a protein_coding protein_coding MGP_BALBcJ_T0060307.1 MGP_BALBcJ_G0027102.1 mouse_genomes_project 3 27826628 27882914 + MGP_BALBcJ_P0060307 Prkci protein_coding protein_coding MGP_BALBcJ_T0060308.1 MGP_BALBcJ_G0027102.1 mouse_genomes_project 3 27836074 27864952 + MGP_BALBcJ_P0060308 Prkci protein_coding protein_coding MGP_BALBcJ_T0060309.1 MGP_BALBcJ_G0027102.1 mouse_genomes_project 3 27862160 27869450 + Prkci protein_coding processed_transcript MGP_BALBcJ_T0060310.1 MGP_BALBcJ_G0027102.1 mouse_genomes_project 3 27868502 27871277 + MGP_BALBcJ_P0060310 Prkci protein_coding protein_coding MGP_BALBcJ_T0060311.1 MGP_BALBcJ_G0027102.1 mouse_genomes_project 3 27868567 27870022 + Prkci protein_coding retained_intron MGP_BALBcJ_T0004223.1 MGP_BALBcJ_G0003717.1 mouse_genomes_project 3 50022626 50025643 - Gm43803 antisense antisense MGP_BALBcJ_T0004224.1 MGP_BALBcJ_G0003717.1 mouse_genomes_project 3 50022643 50023947 - Gm43803 antisense antisense MGP_BALBcJ_T0063155.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145192 106149531 + MGP_BALBcJ_P0063155 Psrc1 protein_coding protein_coding MGP_BALBcJ_T0063156.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145204 106146762 + Psrc1 protein_coding processed_transcript MGP_BALBcJ_T0063157.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145205 106147956 + Psrc1 protein_coding processed_transcript MGP_BALBcJ_T0063158.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145212 106149583 + MGP_BALBcJ_P0063158 Psrc1 protein_coding protein_coding MGP_BALBcJ_T0063159.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145232 106147737 + Psrc1 protein_coding processed_transcript MGP_BALBcJ_T0063160.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145269 106146763 + MGP_BALBcJ_P0063160 Psrc1 protein_coding protein_coding MGP_BALBcJ_T0063161.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145290 106147976 + Psrc1 protein_coding processed_transcript MGP_BALBcJ_T0063162.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106145747 106147298 + Psrc1 protein_coding retained_intron MGP_BALBcJ_T0063163.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106146207 106148227 + Psrc1 protein_coding retained_intron MGP_BALBcJ_T0063164.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106146210 106148058 + Psrc1 protein_coding retained_intron MGP_BALBcJ_T0063165.1 MGP_BALBcJ_G0027747.1 mouse_genomes_project 3 106147418 106148066 + Psrc1 protein_coding processed_transcript MGP_BALBcJ_T0062670.1 MGP_BALBcJ_G0027632.1 mouse_genomes_project 3 96529827 96537337 - MGP_BALBcJ_P0062670 Hsd3b1 protein_coding protein_coding MGP_BALBcJ_T0062671.1 MGP_BALBcJ_G0027632.1 mouse_genomes_project 3 96529829 96537337 - MGP_BALBcJ_P0062671 Hsd3b1 protein_coding protein_coding MGP_BALBcJ_T0001193.1 MGP_BALBcJ_G0001117.1 mouse_genomes_project 3 48759823 48762439 - TEC TEC MGP_BALBcJ_T0098881.1 MGP_BALBcJ_G0036928.1 mouse_genomes_project 3 87288123 87297087 + sense_intronic sense_intronic MGP_BALBcJ_T0007498.1 MGP_BALBcJ_G0006141.1 mouse_genomes_project 3 38164456 38179530 + Gm30852 lincRNA lincRNA MGP_BALBcJ_T0007499.1 MGP_BALBcJ_G0006141.1 mouse_genomes_project 3 38178014 38204556 + Gm30852 lincRNA lincRNA MGP_BALBcJ_T0060754.1 MGP_BALBcJ_G0027183.1 mouse_genomes_project 3 51045782 51067961 + Trpc4 protein_coding processed_transcript MGP_BALBcJ_T0060755.1 MGP_BALBcJ_G0027183.1 mouse_genomes_project 3 51045804 51217339 + MGP_BALBcJ_P0060755 Trpc4 protein_coding protein_coding MGP_BALBcJ_T0060756.1 MGP_BALBcJ_G0027183.1 mouse_genomes_project 3 51045813 51162568 + Trpc4 protein_coding retained_intron MGP_BALBcJ_T0060757.1 MGP_BALBcJ_G0027183.1 mouse_genomes_project 3 51045851 51217335 + MGP_BALBcJ_P0060757 Trpc4 protein_coding protein_coding MGP_BALBcJ_T0060758.1 MGP_BALBcJ_G0027183.1 mouse_genomes_project 3 51046120 51114841 + Trpc4 protein_coding retained_intron MGP_BALBcJ_T0060759.1 MGP_BALBcJ_G0027183.1 mouse_genomes_project 3 51046362 51217283 + MGP_BALBcJ_P0060759 Trpc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014357.1 MGP_BALBcJ_G0012454.1 mouse_genomes_project 3 150888370 150888537 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063802.1 MGP_BALBcJ_G0027867.1 mouse_genomes_project 3 130924616 130943727 + MGP_BALBcJ_P0063802 Ints12 protein_coding protein_coding MGP_BALBcJ_T0063803.1 MGP_BALBcJ_G0027867.1 mouse_genomes_project 3 130924714 130934871 + Ints12 protein_coding retained_intron MGP_BALBcJ_T0063804.1 MGP_BALBcJ_G0027867.1 mouse_genomes_project 3 130933163 130939824 + Ints12 protein_coding processed_transcript MGP_BALBcJ_T0102463.1 MGP_BALBcJ_G0040279.1 mouse_genomes_project 3 61497448 61499750 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061079.1 MGP_BALBcJ_G0027255.1 mouse_genomes_project 3 64546726 64584555 - MGP_BALBcJ_P0061079 Rarres1 protein_coding protein_coding MGP_BALBcJ_T0061288.1 MGP_BALBcJ_G0027307.1 mouse_genomes_project 3 80243292 80260385 + MGP_BALBcJ_P0061288 Plrg1 protein_coding protein_coding MGP_BALBcJ_T0061289.1 MGP_BALBcJ_G0027307.1 mouse_genomes_project 3 80243302 80260319 + MGP_BALBcJ_P0061289 Plrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061290.1 MGP_BALBcJ_G0027307.1 mouse_genomes_project 3 80243325 80260202 + MGP_BALBcJ_P0061290 Plrg1 protein_coding protein_coding MGP_BALBcJ_T0061291.1 MGP_BALBcJ_G0027307.1 mouse_genomes_project 3 80256076 80257098 + Plrg1 protein_coding retained_intron MGP_BALBcJ_T0061292.1 MGP_BALBcJ_G0027307.1 mouse_genomes_project 3 80257005 80258197 + Plrg1 protein_coding retained_intron MGP_BALBcJ_T0014264.1 MGP_BALBcJ_G0012361.1 mouse_genomes_project 3 119137183 119137787 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060434.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32779725 32817030 - MGP_BALBcJ_P0060434 Dcun1d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060435.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32780035 32816981 - MGP_BALBcJ_P0060435 Dcun1d1 protein_coding protein_coding MGP_BALBcJ_T0060436.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32780061 32805394 - MGP_BALBcJ_P0060436 Dcun1d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060437.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32781692 32816528 - MGP_BALBcJ_P0060437 Dcun1d1 protein_coding protein_coding MGP_BALBcJ_T0060438.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32781756 32794046 - Dcun1d1 protein_coding processed_transcript MGP_BALBcJ_T0060439.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32793344 32817009 - Dcun1d1 protein_coding processed_transcript MGP_BALBcJ_T0060440.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32800351 32817018 - Dcun1d1 protein_coding retained_intron MGP_BALBcJ_T0060441.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32803203 32814313 - MGP_BALBcJ_P0060441 Dcun1d1 protein_coding protein_coding MGP_BALBcJ_T0060442.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32803206 32821633 - MGP_BALBcJ_P0060442 Dcun1d1 protein_coding protein_coding MGP_BALBcJ_T0060443.1 MGP_BALBcJ_G0027124.1 mouse_genomes_project 3 32812708 32815652 - Dcun1d1 protein_coding retained_intron MGP_BALBcJ_T0062431.1 MGP_BALBcJ_G0027565.1 mouse_genomes_project 3 93290786 93349646 - MGP_BALBcJ_P0062431 Rprd2 protein_coding protein_coding MGP_BALBcJ_T0062432.1 MGP_BALBcJ_G0027565.1 mouse_genomes_project 3 93291251 93349653 - MGP_BALBcJ_P0062432 Rprd2 protein_coding protein_coding MGP_BALBcJ_T0062433.1 MGP_BALBcJ_G0027565.1 mouse_genomes_project 3 93301454 93307601 - Rprd2 protein_coding retained_intron MGP_BALBcJ_T0062434.1 MGP_BALBcJ_G0027565.1 mouse_genomes_project 3 93303152 93349673 - MGP_BALBcJ_P0062434 Rprd2 protein_coding protein_coding MGP_BALBcJ_T0062435.1 MGP_BALBcJ_G0027565.1 mouse_genomes_project 3 93303967 93307579 - Rprd2 protein_coding processed_transcript MGP_BALBcJ_T0062436.1 MGP_BALBcJ_G0027565.1 mouse_genomes_project 3 93315026 93349752 - Rprd2 protein_coding retained_intron MGP_BALBcJ_T0062957.1 MGP_BALBcJ_G0027693.1 mouse_genomes_project 3 103607349 103644552 + MGP_BALBcJ_P0062957 Adora3 protein_coding protein_coding MGP_BALBcJ_T0062962.1 MGP_BALBcJ_G0027693.1 mouse_genomes_project 3 103640626 103645125 + MGP_BALBcJ_P0062962 Adora3 protein_coding protein_coding MGP_BALBcJ_T0062964.1 MGP_BALBcJ_G0027693.1 mouse_genomes_project 3 103640900 103642556 + Adora3 protein_coding retained_intron MGP_BALBcJ_T0001219.1 MGP_BALBcJ_G0001142.1 mouse_genomes_project 3 54567424 54568721 - TEC TEC MGP_BALBcJ_T0061339.1 MGP_BALBcJ_G0027318.1 mouse_genomes_project 3 81780509 81783969 + MGP_BALBcJ_P0061339 Tigd4 protein_coding protein_coding MGP_BALBcJ_T0101907.1 MGP_BALBcJ_G0039792.1 mouse_genomes_project 3 61838952 61839185 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0013988.1 MGP_BALBcJ_G0012085.1 mouse_genomes_project 3 38298858 38299321 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063286.1 MGP_BALBcJ_G0027771.1 mouse_genomes_project 3 111902921 112097402 + MGP_BALBcJ_P0063286 Col11a1 protein_coding protein_coding MGP_BALBcJ_T0063287.1 MGP_BALBcJ_G0027771.1 mouse_genomes_project 3 111902921 111984368 + MGP_BALBcJ_P0063287 Col11a1 protein_coding protein_coding MGP_BALBcJ_T0063288.1 MGP_BALBcJ_G0027771.1 mouse_genomes_project 3 111903015 111905526 + Col11a1 protein_coding retained_intron MGP_BALBcJ_T0063289.1 MGP_BALBcJ_G0027771.1 mouse_genomes_project 3 111933326 111934294 + Col11a1 protein_coding retained_intron MGP_BALBcJ_T0063290.1 MGP_BALBcJ_G0027771.1 mouse_genomes_project 3 112022953 112029903 + Col11a1 protein_coding retained_intron MGP_BALBcJ_T0063291.1 MGP_BALBcJ_G0027771.1 mouse_genomes_project 3 112041240 112095999 + MGP_BALBcJ_P0063291 Col11a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010502.1 MGP_BALBcJ_G0008627.1 mouse_genomes_project 3 77852271 77852382 - Gm25749 miRNA miRNA MGP_BALBcJ_T0060749.1 MGP_BALBcJ_G0027182.1 mouse_genomes_project 3 50746308 50753176 - MGP_BALBcJ_P0060749 Ufm1 protein_coding protein_coding MGP_BALBcJ_T0060750.1 MGP_BALBcJ_G0027182.1 mouse_genomes_project 3 50746723 50752591 - Ufm1 protein_coding retained_intron MGP_BALBcJ_T0060751.1 MGP_BALBcJ_G0027182.1 mouse_genomes_project 3 50746844 50752664 - MGP_BALBcJ_P0060751 Ufm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060752.1 MGP_BALBcJ_G0027182.1 mouse_genomes_project 3 50747712 50752668 - MGP_BALBcJ_P0060752 Ufm1 protein_coding protein_coding MGP_BALBcJ_T0060753.1 MGP_BALBcJ_G0027182.1 mouse_genomes_project 3 50748517 50752664 - Ufm1 protein_coding retained_intron MGP_BALBcJ_T0007518.1 MGP_BALBcJ_G0006154.1 mouse_genomes_project 3 49641250 49686784 + Gm2447 lincRNA lincRNA MGP_BALBcJ_T0007519.1 MGP_BALBcJ_G0006154.1 mouse_genomes_project 3 49668642 49686782 + Gm2447 lincRNA lincRNA MGP_BALBcJ_T0010497.1 MGP_BALBcJ_G0008622.1 mouse_genomes_project 3 54492214 54492328 + Mir6377 miRNA miRNA MGP_BALBcJ_T0010538.1 MGP_BALBcJ_G0008663.1 mouse_genomes_project 3 127592603 127592762 - Gm24515 miRNA miRNA MGP_BALBcJ_T0007439.1 MGP_BALBcJ_G0006095.1 mouse_genomes_project 3 14197118 14202848 - Gm30340 lincRNA lincRNA MGP_BALBcJ_T0063238.1 MGP_BALBcJ_G0027762.1 mouse_genomes_project 3 106715730 106716123 - MGP_BALBcJ_P0063238 Gm9857 protein_coding protein_coding MGP_BALBcJ_T0062333.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92801435 92806054 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0062334.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92801507 92807927 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0062335.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92801577 92803607 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0062336.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92801935 92804948 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0062337.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92803034 92816257 + MGP_BALBcJ_P0062337 Fam63a protein_coding protein_coding MGP_BALBcJ_T0062338.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92803034 92816257 + MGP_BALBcJ_P0062338 Fam63a protein_coding protein_coding MGP_BALBcJ_T0062339.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92803305 92811898 + Fam63a protein_coding retained_intron MGP_BALBcJ_T0062340.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92803692 92807927 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0062341.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92805929 92808105 + MGP_BALBcJ_P0062341 Fam63a protein_coding protein_coding MGP_BALBcJ_T0062342.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92806289 92808051 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0062343.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92808038 92816254 + MGP_BALBcJ_P0062343 Fam63a protein_coding protein_coding MGP_BALBcJ_T0062344.1 MGP_BALBcJ_G0027551.1 mouse_genomes_project 3 92812076 92816252 + Fam63a protein_coding processed_transcript MGP_BALBcJ_T0101050.1 MGP_BALBcJ_G0039086.1 mouse_genomes_project 3 83348177 83348248 - Rnu73b snoRNA snoRNA MGP_BALBcJ_T0062907.1 MGP_BALBcJ_G0027681.1 mouse_genomes_project 3 102507989 102512952 + MGP_BALBcJ_P0062907 Ppm1j protein_coding protein_coding MGP_BALBcJ_T0062908.1 MGP_BALBcJ_G0027681.1 mouse_genomes_project 3 102512542 102512952 + Ppm1j protein_coding retained_intron MGP_BALBcJ_T0062595.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94754038 94775350 + MGP_BALBcJ_P0062595 Acp6 protein_coding protein_coding MGP_BALBcJ_T0062596.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94754357 94755657 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062597.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94754364 94763572 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062598.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94754364 94762311 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062599.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94762638 94763714 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062600.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94763355 94769131 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062601.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94766411 94769160 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062602.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94767903 94775294 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0062603.1 MGP_BALBcJ_G0027610.1 mouse_genomes_project 3 94772784 94776075 + Acp6 protein_coding retained_intron MGP_BALBcJ_T0007459.1 MGP_BALBcJ_G0006108.1 mouse_genomes_project 3 23965440 23968431 + 1700125G22Rik lincRNA lincRNA MGP_BALBcJ_T0062201.1 MGP_BALBcJ_G0027528.1 mouse_genomes_project 3 92129603 92130982 + protein_coding processed_transcript MGP_BALBcJ_T0062202.1 MGP_BALBcJ_G0027528.1 mouse_genomes_project 3 92129603 92130982 + protein_coding retained_intron MGP_BALBcJ_T0014277.1 MGP_BALBcJ_G0012374.1 mouse_genomes_project 3 121654361 121654962 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014070.1 MGP_BALBcJ_G0012167.1 mouse_genomes_project 3 63266467 63266620 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101029.1 MGP_BALBcJ_G0039065.1 mouse_genomes_project 3 38254153 38254278 - Gm25487 snoRNA snoRNA MGP_BALBcJ_T0013987.1 MGP_BALBcJ_G0012084.1 mouse_genomes_project 3 37656401 37656849 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063634.1 MGP_BALBcJ_G0027833.1 mouse_genomes_project 3 125457610 125526965 + MGP_BALBcJ_P0063634 Zgrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063635.1 MGP_BALBcJ_G0027833.1 mouse_genomes_project 3 125457610 125526970 + MGP_BALBcJ_P0063635 Zgrf1 protein_coding protein_coding MGP_BALBcJ_T0063636.1 MGP_BALBcJ_G0027833.1 mouse_genomes_project 3 125457623 125526082 + MGP_BALBcJ_P0063636 Zgrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063637.1 MGP_BALBcJ_G0027833.1 mouse_genomes_project 3 125457623 125526972 + MGP_BALBcJ_P0063637 Zgrf1 protein_coding protein_coding MGP_BALBcJ_T0063638.1 MGP_BALBcJ_G0027833.1 mouse_genomes_project 3 125457754 125468943 + MGP_BALBcJ_P0063638 Zgrf1 protein_coding protein_coding MGP_BALBcJ_T0063639.1 MGP_BALBcJ_G0027833.1 mouse_genomes_project 3 125488655 125525933 + MGP_BALBcJ_P0063639 Zgrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061515.1 MGP_BALBcJ_G0027358.1 mouse_genomes_project 3 85483698 85495534 - MGP_BALBcJ_P0061515 Rhbg protein_coding protein_coding MGP_BALBcJ_T0098907.1 MGP_BALBcJ_G0036954.1 mouse_genomes_project 3 101578499 101579782 + Gm15472 sense_intronic sense_intronic MGP_BALBcJ_T0014031.1 MGP_BALBcJ_G0012128.1 mouse_genomes_project 3 54133095 54133348 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014268.1 MGP_BALBcJ_G0012365.1 mouse_genomes_project 3 119754575 119754952 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001152.1 MGP_BALBcJ_G0001077.1 mouse_genomes_project 3 34744512 34745780 + TEC TEC MGP_BALBcJ_T0060929.1 MGP_BALBcJ_G0027220.1 mouse_genomes_project 3 56176588 56203671 - MGP_BALBcJ_P0060929 Igsf10 protein_coding protein_coding MGP_BALBcJ_T0060930.1 MGP_BALBcJ_G0027220.1 mouse_genomes_project 3 56177779 56203574 - MGP_BALBcJ_P0060930 Igsf10 protein_coding protein_coding MGP_BALBcJ_T0060931.1 MGP_BALBcJ_G0027220.1 mouse_genomes_project 3 56177779 56203809 - MGP_BALBcJ_P0060931 Igsf10 protein_coding protein_coding MGP_BALBcJ_T0060932.1 MGP_BALBcJ_G0027220.1 mouse_genomes_project 3 56199185 56203671 - MGP_BALBcJ_P0060932 Igsf10 protein_coding protein_coding MGP_BALBcJ_T0001168.1 MGP_BALBcJ_G0001093.1 mouse_genomes_project 3 44189133 44191856 - TEC TEC MGP_BALBcJ_T0007430.1 MGP_BALBcJ_G0006089.1 mouse_genomes_project 3 8654855 8675882 - Gm10745 lincRNA lincRNA MGP_BALBcJ_T0014072.1 MGP_BALBcJ_G0012169.1 mouse_genomes_project 3 63948793 63949582 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061703.1 MGP_BALBcJ_G0027389.1 mouse_genomes_project 3 86344441 86354904 + MGP_BALBcJ_P0061703 Pklr protein_coding protein_coding MGP_BALBcJ_T0061704.1 MGP_BALBcJ_G0027389.1 mouse_genomes_project 3 86344473 86345759 + Pklr protein_coding processed_transcript MGP_BALBcJ_T0061705.1 MGP_BALBcJ_G0027389.1 mouse_genomes_project 3 86344871 86355109 + MGP_BALBcJ_P0061705 Pklr protein_coding protein_coding MGP_BALBcJ_T0061706.1 MGP_BALBcJ_G0027389.1 mouse_genomes_project 3 86344878 86349849 + MGP_BALBcJ_P0061706 Pklr protein_coding protein_coding MGP_BALBcJ_T0061707.1 MGP_BALBcJ_G0027389.1 mouse_genomes_project 3 86344922 86349222 + Pklr protein_coding processed_transcript MGP_BALBcJ_T0001178.1 MGP_BALBcJ_G0001103.1 mouse_genomes_project 3 48100306 48102798 + TEC TEC MGP_BALBcJ_T0098883.1 MGP_BALBcJ_G0036930.1 mouse_genomes_project 3 91931152 91933311 - Gm43773 sense_intronic sense_intronic MGP_BALBcJ_T0007639.1 MGP_BALBcJ_G0006247.1 mouse_genomes_project 3 113586031 113587609 + Gm9889 lincRNA pseudogene MGP_BALBcJ_T0007640.1 MGP_BALBcJ_G0006247.1 mouse_genomes_project 3 113586031 113587610 + Gm9889 lincRNA lincRNA MGP_BALBcJ_T0013922.1 MGP_BALBcJ_G0012019.1 mouse_genomes_project 3 15451578 15452779 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060201.1 MGP_BALBcJ_G0027085.1 mouse_genomes_project 3 24691344 24722022 - MGP_BALBcJ_P0060201 Tmem212 protein_coding protein_coding MGP_BALBcJ_T0099744.1 MGP_BALBcJ_G0037780.1 mouse_genomes_project 3 62836015 62836122 - Gm25755 snRNA snRNA MGP_BALBcJ_T0001376.1 MGP_BALBcJ_G0001298.1 mouse_genomes_project 3 150403448 150405760 - TEC TEC MGP_BALBcJ_T0007428.1 MGP_BALBcJ_G0006087.1 mouse_genomes_project 3 6584107 6614797 + Gm16337 lincRNA lincRNA MGP_BALBcJ_T0063526.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 120993881 121147736 - MGP_BALBcJ_P0063526 Synpo2 protein_coding protein_coding MGP_BALBcJ_T0063527.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 120993881 121147787 - MGP_BALBcJ_P0063527 Synpo2 protein_coding protein_coding MGP_BALBcJ_T0063528.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 120993881 121029879 - MGP_BALBcJ_P0063528 Synpo2 protein_coding protein_coding MGP_BALBcJ_T0063529.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 121023661 121147787 - MGP_BALBcJ_P0063529 Synpo2 protein_coding protein_coding MGP_BALBcJ_T0063530.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 121025744 121030055 - MGP_BALBcJ_P0063530 Synpo2 protein_coding protein_coding MGP_BALBcJ_T0063531.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 121028025 121031744 - MGP_BALBcJ_P0063531 Synpo2 protein_coding protein_coding MGP_BALBcJ_T0063532.1 MGP_BALBcJ_G0027818.1 mouse_genomes_project 3 121092571 121147789 - Synpo2 protein_coding processed_transcript MGP_BALBcJ_T0099732.1 MGP_BALBcJ_G0037768.1 mouse_genomes_project 3 46604449 46604556 + Gm23096 snRNA snRNA MGP_BALBcJ_T0001314.1 MGP_BALBcJ_G0001237.1 mouse_genomes_project 3 124322631 124327444 + TEC TEC MGP_BALBcJ_T0061595.1 MGP_BALBcJ_G0027372.1 mouse_genomes_project 3 85793438 85802474 + MGP_BALBcJ_P0061595 Mex3a protein_coding protein_coding MGP_BALBcJ_T0014221.1 MGP_BALBcJ_G0012318.1 mouse_genomes_project 3 105613101 105614155 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013905.1 MGP_BALBcJ_G0012002.1 mouse_genomes_project 3 10605240 10605495 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060366.1 MGP_BALBcJ_G0027114.1 mouse_genomes_project 3 29567193 29578662 - MGP_BALBcJ_P0060366 Mrpl47 protein_coding protein_coding MGP_BALBcJ_T0060367.1 MGP_BALBcJ_G0027114.1 mouse_genomes_project 3 29569371 29574127 - Mrpl47 protein_coding processed_transcript MGP_BALBcJ_T0060368.1 MGP_BALBcJ_G0027114.1 mouse_genomes_project 3 29577615 29579118 - Mrpl47 protein_coding retained_intron MGP_BALBcJ_T0098588.1 MGP_BALBcJ_G0036642.1 mouse_genomes_project 3 36522269 36522388 - n-R5s195 rRNA rRNA MGP_BALBcJ_T0007574.1 MGP_BALBcJ_G0006199.1 mouse_genomes_project 3 84371570 84376319 + Gm37855 lincRNA lincRNA MGP_BALBcJ_T0062085.1 MGP_BALBcJ_G0027469.1 mouse_genomes_project 3 89744357 89745638 + MGP_BALBcJ_P0062085 Sprr2i protein_coding protein_coding MGP_BALBcJ_T0099755.1 MGP_BALBcJ_G0037791.1 mouse_genomes_project 3 83562429 83562598 + Gm23850 snRNA snRNA MGP_BALBcJ_T0063166.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106152818 106177521 - MGP_BALBcJ_P0063166 Celsr2 protein_coding protein_coding MGP_BALBcJ_T0063167.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106154188 106160918 - MGP_BALBcJ_P0063167 Celsr2 protein_coding protein_coding MGP_BALBcJ_T0063168.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106154345 106155400 - Celsr2 protein_coding processed_transcript MGP_BALBcJ_T0063169.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106154566 106155491 - Celsr2 protein_coding retained_intron MGP_BALBcJ_T0063170.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106155501 106156269 - Celsr2 protein_coding retained_intron MGP_BALBcJ_T0063171.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106157526 106158460 - Celsr2 protein_coding retained_intron MGP_BALBcJ_T0063172.1 MGP_BALBcJ_G0027748.1 mouse_genomes_project 3 106163226 106164556 - Celsr2 protein_coding retained_intron MGP_BALBcJ_T0007571.1 MGP_BALBcJ_G0006196.1 mouse_genomes_project 3 82590835 82622553 - Gm42813 lincRNA lincRNA MGP_BALBcJ_T0001104.1 MGP_BALBcJ_G0001029.1 mouse_genomes_project 3 6326323 6330090 + TEC TEC MGP_BALBcJ_T0001202.1 MGP_BALBcJ_G0001125.1 mouse_genomes_project 3 49976238 49979336 - TEC TEC MGP_BALBcJ_T0001249.1 MGP_BALBcJ_G0001172.1 mouse_genomes_project 3 82389228 82390496 - TEC TEC MGP_BALBcJ_T0004216.1 MGP_BALBcJ_G0003710.1 mouse_genomes_project 3 35903277 35904359 - Gm43539 antisense antisense MGP_BALBcJ_T0063917.1 MGP_BALBcJ_G0027886.1 mouse_genomes_project 3 135491406 135495180 + Ddit4l protein_coding processed_transcript MGP_BALBcJ_T0063918.1 MGP_BALBcJ_G0027886.1 mouse_genomes_project 3 135493457 135498192 + MGP_BALBcJ_P0063918 Ddit4l protein_coding protein_coding MGP_BALBcJ_T0063919.1 MGP_BALBcJ_G0027886.1 mouse_genomes_project 3 135493822 135495955 + MGP_BALBcJ_P0063919 Ddit4l protein_coding protein_coding MGP_BALBcJ_T0010507.1 MGP_BALBcJ_G0008632.1 mouse_genomes_project 3 85456462 85456570 - Gm25641 miRNA miRNA MGP_BALBcJ_T0062566.1 MGP_BALBcJ_G0027603.1 mouse_genomes_project 3 94292442 94308417 - MGP_BALBcJ_P0062566 Polr3c protein_coding protein_coding MGP_BALBcJ_T0062567.1 MGP_BALBcJ_G0027603.1 mouse_genomes_project 3 94292475 94308230 - MGP_BALBcJ_P0062567 Polr3c protein_coding protein_coding MGP_BALBcJ_T0062568.1 MGP_BALBcJ_G0027603.1 mouse_genomes_project 3 94297391 94304590 - MGP_BALBcJ_P0062568 Polr3c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062569.1 MGP_BALBcJ_G0027603.1 mouse_genomes_project 3 94299493 94308265 - Polr3c protein_coding retained_intron MGP_BALBcJ_T0062570.1 MGP_BALBcJ_G0027603.1 mouse_genomes_project 3 94304190 94308243 - MGP_BALBcJ_P0062570 Polr3c protein_coding protein_coding MGP_BALBcJ_T0062571.1 MGP_BALBcJ_G0027603.1 mouse_genomes_project 3 94304193 94308264 - MGP_BALBcJ_P0062571 Polr3c protein_coding protein_coding MGP_BALBcJ_T0013961.1 MGP_BALBcJ_G0012058.1 mouse_genomes_project 3 32751921 32752910 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004378.1 MGP_BALBcJ_G0003819.1 mouse_genomes_project 3 140597915 140598935 - Gm15540 antisense antisense MGP_BALBcJ_T0001396.1 MGP_BALBcJ_G0001318.1 mouse_genomes_project 3 156228325 156229685 + TEC TEC MGP_BALBcJ_T0014109.1 MGP_BALBcJ_G0012206.1 mouse_genomes_project 3 75044482 75044854 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062103.1 MGP_BALBcJ_G0027485.1 mouse_genomes_project 3 90025563 90027304 - MGP_BALBcJ_P0062103 Lce1d protein_coding protein_coding MGP_BALBcJ_T0004244.1 MGP_BALBcJ_G0003733.1 mouse_genomes_project 3 76998402 77025815 - Gm36569 antisense antisense MGP_BALBcJ_T0014004.1 MGP_BALBcJ_G0012101.1 mouse_genomes_project 3 44373055 44373765 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014330.1 MGP_BALBcJ_G0012427.1 mouse_genomes_project 3 137998443 138000083 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062456.1 MGP_BALBcJ_G0027569.1 mouse_genomes_project 3 93418160 93426216 - MGP_BALBcJ_P0062456 BC028528 protein_coding protein_coding MGP_BALBcJ_T0062457.1 MGP_BALBcJ_G0027569.1 mouse_genomes_project 3 93418164 93426166 - MGP_BALBcJ_P0062457 BC028528 protein_coding protein_coding MGP_BALBcJ_T0062458.1 MGP_BALBcJ_G0027569.1 mouse_genomes_project 3 93419174 93426141 - MGP_BALBcJ_P0062458 BC028528 protein_coding protein_coding MGP_BALBcJ_T0062459.1 MGP_BALBcJ_G0027569.1 mouse_genomes_project 3 93422153 93426162 - BC028528 protein_coding processed_transcript MGP_BALBcJ_T0062460.1 MGP_BALBcJ_G0027569.1 mouse_genomes_project 3 93422640 93426192 - BC028528 protein_coding retained_intron MGP_BALBcJ_T0101027.1 MGP_BALBcJ_G0039063.1 mouse_genomes_project 3 34896188 34896319 - Gm22899 snoRNA snoRNA MGP_BALBcJ_T0007481.1 MGP_BALBcJ_G0006128.1 mouse_genomes_project 3 33419117 33425853 - Gm11549 lincRNA lincRNA MGP_BALBcJ_T0007637.1 MGP_BALBcJ_G0006245.1 mouse_genomes_project 3 106848943 106850768 - 4930408K08Rik lincRNA lincRNA MGP_BALBcJ_T0014311.1 MGP_BALBcJ_G0012408.1 mouse_genomes_project 3 133778041 133778588 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062153.1 MGP_BALBcJ_G0027518.1 mouse_genomes_project 3 91784574 91790545 + MGP_BALBcJ_P0062153 Lingo4 protein_coding protein_coding MGP_BALBcJ_T0063113.1 MGP_BALBcJ_G0027735.1 mouse_genomes_project 3 105800576 105804844 - MGP_BALBcJ_P0063113 Gstm4 protein_coding protein_coding MGP_BALBcJ_T0061382.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83989828 84132596 - MGP_BALBcJ_P0061382 Dclk2 protein_coding protein_coding MGP_BALBcJ_T0061383.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83989830 84133069 - MGP_BALBcJ_P0061383 Dclk2 protein_coding protein_coding MGP_BALBcJ_T0061384.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83989830 84132405 - MGP_BALBcJ_P0061384 Dclk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061385.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83989836 84132552 - MGP_BALBcJ_P0061385 Dclk2 protein_coding protein_coding MGP_BALBcJ_T0061386.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83990889 84132387 - MGP_BALBcJ_P0061386 Dclk2 protein_coding protein_coding MGP_BALBcJ_T0061387.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83990918 83995993 - Dclk2 protein_coding processed_transcript MGP_BALBcJ_T0061388.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83991026 84002838 - Dclk2 protein_coding processed_transcript MGP_BALBcJ_T0061389.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 83993023 84001690 - Dclk2 protein_coding processed_transcript MGP_BALBcJ_T0061390.1 MGP_BALBcJ_G0027329.1 mouse_genomes_project 3 84002598 84132591 - MGP_BALBcJ_P0061390 Dclk2 protein_coding protein_coding MGP_BALBcJ_T0014085.1 MGP_BALBcJ_G0012182.1 mouse_genomes_project 3 66742515 66742912 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004308.1 MGP_BALBcJ_G0003775.1 mouse_genomes_project 3 102129159 102137910 + Gm43257 antisense antisense MGP_BALBcJ_T0007452.1 MGP_BALBcJ_G0006101.1 mouse_genomes_project 3 17381706 17384813 - Gm31466 lincRNA lincRNA MGP_BALBcJ_T0098878.1 MGP_BALBcJ_G0036926.1 mouse_genomes_project 3 76814000 76817519 - Gm26984 sense_intronic sense_intronic MGP_BALBcJ_T0004357.1 MGP_BALBcJ_G0003805.1 mouse_genomes_project 3 127662461 127673107 + 6330410L21Rik antisense antisense MGP_BALBcJ_T0004253.1 MGP_BALBcJ_G0003739.1 mouse_genomes_project 3 83971777 83982334 - Gm37876 antisense antisense MGP_BALBcJ_T0013942.1 MGP_BALBcJ_G0012039.1 mouse_genomes_project 3 23205197 23207164 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059975.1 MGP_BALBcJ_G0027025.1 mouse_genomes_project 3 5318184 5371434 + MGP_BALBcJ_P0059975 Stmn2 protein_coding protein_coding MGP_BALBcJ_T0059976.1 MGP_BALBcJ_G0027025.1 mouse_genomes_project 3 5318339 5357453 + Stmn2 protein_coding retained_intron MGP_BALBcJ_T0059977.1 MGP_BALBcJ_G0027025.1 mouse_genomes_project 3 5318410 5348568 + Stmn2 protein_coding retained_intron MGP_BALBcJ_T0059978.1 MGP_BALBcJ_G0027025.1 mouse_genomes_project 3 5370092 5371403 + Stmn2 protein_coding processed_transcript MGP_BALBcJ_T0061836.1 MGP_BALBcJ_G0027410.1 mouse_genomes_project 3 86615210 86626063 - MGP_BALBcJ_P0061836 Flad1 protein_coding protein_coding MGP_BALBcJ_T0061837.1 MGP_BALBcJ_G0027410.1 mouse_genomes_project 3 86616175 86626056 - MGP_BALBcJ_P0061837 Flad1 protein_coding protein_coding MGP_BALBcJ_T0061838.1 MGP_BALBcJ_G0027410.1 mouse_genomes_project 3 86616873 86626062 - MGP_BALBcJ_P0061838 Flad1 protein_coding protein_coding MGP_BALBcJ_T0061839.1 MGP_BALBcJ_G0027410.1 mouse_genomes_project 3 86622922 86625974 - MGP_BALBcJ_P0061839 Flad1 protein_coding protein_coding MGP_BALBcJ_T0061840.1 MGP_BALBcJ_G0027410.1 mouse_genomes_project 3 86623147 86626063 - MGP_BALBcJ_P0061840 Flad1 protein_coding protein_coding MGP_BALBcJ_T0102491.1 MGP_BALBcJ_G0040307.1 mouse_genomes_project 3 104007403 104025810 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011524.1 MGP_BALBcJ_G0009649.1 mouse_genomes_project 3 86515058 86515310 + Gm22642 misc_RNA misc_RNA MGP_BALBcJ_T0014166.1 MGP_BALBcJ_G0012263.1 mouse_genomes_project 3 91838914 91840657 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062117.1 MGP_BALBcJ_G0027498.1 mouse_genomes_project 3 90272038 90273157 + MGP_BALBcJ_P0062117 Lce3b protein_coding protein_coding MGP_BALBcJ_T0099769.1 MGP_BALBcJ_G0037805.1 mouse_genomes_project 3 92607619 92607726 + Gm22301 snRNA snRNA MGP_BALBcJ_T0062100.1 MGP_BALBcJ_G0027482.1 mouse_genomes_project 3 89992241 89993548 - MGP_BALBcJ_P0062100 Lce1b protein_coding protein_coding MGP_BALBcJ_T0001311.1 MGP_BALBcJ_G0001234.1 mouse_genomes_project 3 122250044 122250290 - TEC TEC MGP_BALBcJ_T0059983.1 MGP_BALBcJ_G0027027.1 mouse_genomes_project 3 5617290 5733668 - MGP_BALBcJ_P0059983 Mrps28 protein_coding protein_coding MGP_BALBcJ_T0060330.1 MGP_BALBcJ_G0027109.1 mouse_genomes_project 3 29306674 29326321 - MGP_BALBcJ_P0060330 Kcnmb3 protein_coding protein_coding MGP_BALBcJ_T0013994.1 MGP_BALBcJ_G0012091.1 mouse_genomes_project 3 40751112 40751458 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001154.1 MGP_BALBcJ_G0001079.1 mouse_genomes_project 3 35314328 35315509 - TEC TEC MGP_BALBcJ_T0014159.1 MGP_BALBcJ_G0012256.1 mouse_genomes_project 3 90567559 90570520 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099799.1 MGP_BALBcJ_G0037835.1 mouse_genomes_project 3 140626153 140626258 - Gm24457 snRNA snRNA MGP_BALBcJ_T0102458.1 MGP_BALBcJ_G0040274.1 mouse_genomes_project 3 56375706 56375943 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099736.1 MGP_BALBcJ_G0037772.1 mouse_genomes_project 3 54794865 54794965 - Gm24531 snRNA snRNA MGP_BALBcJ_T0061279.1 MGP_BALBcJ_G0027302.1 mouse_genomes_project 3 80020689 80061815 - MGP_BALBcJ_P0061279 Rbm46 protein_coding protein_coding MGP_BALBcJ_T0061280.1 MGP_BALBcJ_G0027302.1 mouse_genomes_project 3 80021276 80051984 - MGP_BALBcJ_P0061280 Rbm46 protein_coding protein_coding MGP_BALBcJ_T0061281.1 MGP_BALBcJ_G0027302.1 mouse_genomes_project 3 80021279 80051984 - MGP_BALBcJ_P0061281 Rbm46 protein_coding protein_coding MGP_BALBcJ_T0001332.1 MGP_BALBcJ_G0001255.1 mouse_genomes_project 3 125629949 125632310 - TEC TEC MGP_BALBcJ_T0014035.1 MGP_BALBcJ_G0012132.1 mouse_genomes_project 3 54589342 54589819 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102452.1 MGP_BALBcJ_G0040268.1 mouse_genomes_project 3 11204884 11221061 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014143.1 MGP_BALBcJ_G0012240.1 mouse_genomes_project 3 86325328 86325581 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014324.1 MGP_BALBcJ_G0012421.1 mouse_genomes_project 3 136457168 136457835 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098762.1 MGP_BALBcJ_G0036816.1 mouse_genomes_project 3 106317260 106317674 - Scarna2 scaRNA scaRNA MGP_BALBcJ_T0063459.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119843745 119865930 + MGP_BALBcJ_P0063459 Arhgap29 protein_coding protein_coding MGP_BALBcJ_T0063460.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119844433 119909312 + MGP_BALBcJ_P0063460 Arhgap29 protein_coding protein_coding MGP_BALBcJ_T0063461.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119844434 119881499 + MGP_BALBcJ_P0063461 Arhgap29 protein_coding protein_coding MGP_BALBcJ_T0063462.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119859829 119885372 + MGP_BALBcJ_P0063462 Arhgap29 protein_coding protein_coding MGP_BALBcJ_T0063463.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119859829 119902473 + MGP_BALBcJ_P0063463 Arhgap29 protein_coding protein_coding MGP_BALBcJ_T0063464.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119859930 119907534 + MGP_BALBcJ_P0063464 Arhgap29 protein_coding protein_coding MGP_BALBcJ_T0063465.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119874132 119885467 + Arhgap29 protein_coding retained_intron MGP_BALBcJ_T0063466.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119881451 119885141 + Arhgap29 protein_coding retained_intron MGP_BALBcJ_T0063467.1 MGP_BALBcJ_G0027805.1 mouse_genomes_project 3 119895563 119898357 + Arhgap29 protein_coding retained_intron MGP_BALBcJ_T0001328.1 MGP_BALBcJ_G0001251.1 mouse_genomes_project 3 125070907 125074614 - TEC TEC MGP_BALBcJ_T0060058.1 MGP_BALBcJ_G0027052.1 mouse_genomes_project 3 11761831 11770232 + MGP_BALBcJ_P0060058 Car2 protein_coding protein_coding MGP_BALBcJ_T0060059.1 MGP_BALBcJ_G0027052.1 mouse_genomes_project 3 11761986 11775862 + MGP_BALBcJ_P0060059 Car2 protein_coding protein_coding MGP_BALBcJ_T0060060.1 MGP_BALBcJ_G0027052.1 mouse_genomes_project 3 11762197 11764125 + Car2 protein_coding retained_intron MGP_BALBcJ_T0014063.1 MGP_BALBcJ_G0012160.1 mouse_genomes_project 3 62678298 62679105 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102494.1 MGP_BALBcJ_G0040310.1 mouse_genomes_project 3 105652931 105657399 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007502.1 MGP_BALBcJ_G0006143.1 mouse_genomes_project 3 38297140 38301602 - Platr4 lincRNA lincRNA MGP_BALBcJ_T0007503.1 MGP_BALBcJ_G0006143.1 mouse_genomes_project 3 38300804 38306315 - Platr4 lincRNA lincRNA MGP_BALBcJ_T0007504.1 MGP_BALBcJ_G0006143.1 mouse_genomes_project 3 38301929 38306317 - Platr4 lincRNA lincRNA MGP_BALBcJ_T0001238.1 MGP_BALBcJ_G0001161.1 mouse_genomes_project 3 72752107 72756542 + TEC TEC MGP_BALBcJ_T0063892.1 MGP_BALBcJ_G0027881.1 mouse_genomes_project 3 133701254 133763696 + MGP_BALBcJ_P0063892 Slc39a8 protein_coding protein_coding MGP_BALBcJ_T0063893.1 MGP_BALBcJ_G0027881.1 mouse_genomes_project 3 133701629 133735499 + Slc39a8 protein_coding retained_intron MGP_BALBcJ_T0063894.1 MGP_BALBcJ_G0027881.1 mouse_genomes_project 3 133701632 133763876 + MGP_BALBcJ_P0063894 Slc39a8 protein_coding protein_coding MGP_BALBcJ_T0063895.1 MGP_BALBcJ_G0027881.1 mouse_genomes_project 3 133701741 133763874 + MGP_BALBcJ_P0063895 Slc39a8 protein_coding protein_coding MGP_BALBcJ_T0063896.1 MGP_BALBcJ_G0027881.1 mouse_genomes_project 3 133702041 133763688 + MGP_BALBcJ_P0063896 Slc39a8 protein_coding protein_coding MGP_BALBcJ_T0063897.1 MGP_BALBcJ_G0027881.1 mouse_genomes_project 3 133759458 133763870 + Slc39a8 protein_coding retained_intron MGP_BALBcJ_T0007700.1 MGP_BALBcJ_G0006297.1 mouse_genomes_project 3 137610597 137617965 - lincRNA lincRNA MGP_BALBcJ_T0063765.1 MGP_BALBcJ_G0027859.1 mouse_genomes_project 3 129247944 129274572 - MGP_BALBcJ_P0063765 Sgms2 protein_coding protein_coding MGP_BALBcJ_T0063766.1 MGP_BALBcJ_G0027859.1 mouse_genomes_project 3 129271748 129274579 - MGP_BALBcJ_P0063766 Sgms2 protein_coding protein_coding MGP_BALBcJ_T0063767.1 MGP_BALBcJ_G0027859.1 mouse_genomes_project 3 129271807 129334053 - MGP_BALBcJ_P0063767 Sgms2 protein_coding protein_coding MGP_BALBcJ_T0063768.1 MGP_BALBcJ_G0027859.1 mouse_genomes_project 3 129271872 129334985 - Sgms2 protein_coding processed_transcript MGP_BALBcJ_T0101031.1 MGP_BALBcJ_G0039067.1 mouse_genomes_project 3 44123512 44123650 + Gm23891 snoRNA snoRNA MGP_BALBcJ_T0062951.1 MGP_BALBcJ_G0027691.1 mouse_genomes_project 3 103437080 103453265 + MGP_BALBcJ_P0062951 Fam212b protein_coding protein_coding MGP_BALBcJ_T0062952.1 MGP_BALBcJ_G0027691.1 mouse_genomes_project 3 103437950 103450575 + MGP_BALBcJ_P0062952 Fam212b protein_coding protein_coding MGP_BALBcJ_T0064183.1 MGP_BALBcJ_G0027945.1 mouse_genomes_project 3 144459956 144475394 - MGP_BALBcJ_P0064183 Rpf1 protein_coding protein_coding MGP_BALBcJ_T0064184.1 MGP_BALBcJ_G0027945.1 mouse_genomes_project 3 144460344 144462225 - MGP_BALBcJ_P0064184 Rpf1 protein_coding protein_coding MGP_BALBcJ_T0064185.1 MGP_BALBcJ_G0027945.1 mouse_genomes_project 3 144460423 144462493 - Rpf1 protein_coding retained_intron MGP_BALBcJ_T0064186.1 MGP_BALBcJ_G0027945.1 mouse_genomes_project 3 144462173 144475016 - Rpf1 protein_coding processed_transcript MGP_BALBcJ_T0064187.1 MGP_BALBcJ_G0027945.1 mouse_genomes_project 3 144464795 144475376 - MGP_BALBcJ_P0064187 Rpf1 protein_coding protein_coding MGP_BALBcJ_T0064472.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156098028 156129804 + MGP_BALBcJ_P0064472 Lrrc40 protein_coding protein_coding MGP_BALBcJ_T0064473.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156098066 156128406 + MGP_BALBcJ_P0064473 Lrrc40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064474.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156098068 156128406 + MGP_BALBcJ_P0064474 Lrrc40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064475.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156098088 156113138 + MGP_BALBcJ_P0064475 Lrrc40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064476.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156098116 156113127 + MGP_BALBcJ_P0064476 Lrrc40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064477.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156098226 156113073 + MGP_BALBcJ_P0064477 Lrrc40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064478.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156123578 156127863 + Lrrc40 protein_coding retained_intron MGP_BALBcJ_T0064479.1 MGP_BALBcJ_G0027986.1 mouse_genomes_project 3 156123979 156125357 + Lrrc40 protein_coding retained_intron MGP_BALBcJ_T0064248.1 MGP_BALBcJ_G0027955.1 mouse_genomes_project 3 149777886 149782026 - MGP_BALBcJ_P0064248 Ifi44l protein_coding protein_coding MGP_BALBcJ_T0098888.1 MGP_BALBcJ_G0036935.1 mouse_genomes_project 3 96884598 96888063 + Gm42717 sense_intronic sense_intronic MGP_BALBcJ_T0001111.1 MGP_BALBcJ_G0001036.1 mouse_genomes_project 3 15508086 15512066 + TEC TEC MGP_BALBcJ_T0001313.1 MGP_BALBcJ_G0001236.1 mouse_genomes_project 3 123070506 123072913 - TEC TEC MGP_BALBcJ_T0001355.1 MGP_BALBcJ_G0001277.1 mouse_genomes_project 3 131466880 131477951 - TEC TEC MGP_BALBcJ_T0099725.1 MGP_BALBcJ_G0037761.1 mouse_genomes_project 3 29853263 29853420 + Gm23214 snRNA snRNA MGP_BALBcJ_T0062612.1 MGP_BALBcJ_G0027613.1 mouse_genomes_project 3 95160350 95211489 - MGP_BALBcJ_P0062612 Chd1l protein_coding protein_coding MGP_BALBcJ_T0062613.1 MGP_BALBcJ_G0027613.1 mouse_genomes_project 3 95162637 95167435 - Chd1l protein_coding retained_intron MGP_BALBcJ_T0062614.1 MGP_BALBcJ_G0027613.1 mouse_genomes_project 3 95171357 95211478 - Chd1l protein_coding retained_intron MGP_BALBcJ_T0064003.1 MGP_BALBcJ_G0027905.1 mouse_genomes_project 3 137068643 137541119 + MGP_BALBcJ_P0064003 Stpg2 protein_coding protein_coding MGP_BALBcJ_T0064004.1 MGP_BALBcJ_G0027905.1 mouse_genomes_project 3 137068842 137541808 + MGP_BALBcJ_P0064004 Stpg2 protein_coding protein_coding MGP_BALBcJ_T0010484.1 MGP_BALBcJ_G0008609.1 mouse_genomes_project 3 25246789 25246865 + Mir466q miRNA miRNA MGP_BALBcJ_T0014269.1 MGP_BALBcJ_G0012366.1 mouse_genomes_project 3 120046324 120046736 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061258.1 MGP_BALBcJ_G0027297.1 mouse_genomes_project 3 79171008 79188300 + Asic5 protein_coding processed_transcript MGP_BALBcJ_T0061259.1 MGP_BALBcJ_G0027297.1 mouse_genomes_project 3 79185549 79209407 + MGP_BALBcJ_P0061259 Asic5 protein_coding protein_coding MGP_BALBcJ_T0001303.1 MGP_BALBcJ_G0001226.1 mouse_genomes_project 3 119675627 119676700 - TEC TEC MGP_BALBcJ_T0059993.1 MGP_BALBcJ_G0027031.1 mouse_genomes_project 3 6519832 6669899 - MGP_BALBcJ_P0059993 Pag1 protein_coding protein_coding MGP_BALBcJ_T0059994.1 MGP_BALBcJ_G0027031.1 mouse_genomes_project 3 6524223 6669850 - MGP_BALBcJ_P0059994 Pag1 protein_coding protein_coding MGP_BALBcJ_T0059995.1 MGP_BALBcJ_G0027031.1 mouse_genomes_project 3 6525092 6537329 - Pag1 protein_coding retained_intron MGP_BALBcJ_T0059996.1 MGP_BALBcJ_G0027031.1 mouse_genomes_project 3 6578574 6669583 - Pag1 protein_coding retained_intron MGP_BALBcJ_T0059997.1 MGP_BALBcJ_G0027031.1 mouse_genomes_project 3 6663646 6669850 - Pag1 protein_coding processed_transcript MGP_BALBcJ_T0010503.1 MGP_BALBcJ_G0008628.1 mouse_genomes_project 3 79294039 79294102 - Mir7010 miRNA miRNA MGP_BALBcJ_T0001366.1 MGP_BALBcJ_G0001288.1 mouse_genomes_project 3 141510410 141516454 + TEC TEC MGP_BALBcJ_T0014267.1 MGP_BALBcJ_G0012364.1 mouse_genomes_project 3 119714430 119714836 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098901.1 MGP_BALBcJ_G0036948.1 mouse_genomes_project 3 100183277 100186183 + Gm42679 sense_intronic sense_intronic MGP_BALBcJ_T0098592.1 MGP_BALBcJ_G0036646.1 mouse_genomes_project 3 94059174 94059291 + Gm28001 rRNA rRNA MGP_BALBcJ_T0010523.1 MGP_BALBcJ_G0008648.1 mouse_genomes_project 3 96877340 96877450 - Mir6481 miRNA miRNA MGP_BALBcJ_T0013949.1 MGP_BALBcJ_G0012046.1 mouse_genomes_project 3 26749973 26750412 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001349.1 MGP_BALBcJ_G0001271.1 mouse_genomes_project 3 129060311 129062569 + TEC TEC MGP_BALBcJ_T0014351.1 MGP_BALBcJ_G0012448.1 mouse_genomes_project 3 147176794 147177253 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013873.1 MGP_BALBcJ_G0011970.1 mouse_genomes_project 3 1474233 1474353 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013869.1 MGP_BALBcJ_G0011966.1 mouse_genomes_project 3 662018 662792 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001255.1 MGP_BALBcJ_G0001178.1 mouse_genomes_project 3 87580833 87583392 + TEC TEC MGP_BALBcJ_T0061777.1 MGP_BALBcJ_G0027397.1 mouse_genomes_project 3 86437900 86442265 + MGP_BALBcJ_P0061777 Muc1 protein_coding protein_coding MGP_BALBcJ_T0061778.1 MGP_BALBcJ_G0027397.1 mouse_genomes_project 3 86440082 86440926 + Muc1 protein_coding processed_transcript MGP_BALBcJ_T0061779.1 MGP_BALBcJ_G0027397.1 mouse_genomes_project 3 86440314 86442081 + Muc1 protein_coding processed_transcript MGP_BALBcJ_T0007508.1 MGP_BALBcJ_G0006145.1 mouse_genomes_project 3 45557801 45564363 - lincRNA lincRNA MGP_BALBcJ_T0014163.1 MGP_BALBcJ_G0012260.1 mouse_genomes_project 3 90765119 90765671 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004330.1 MGP_BALBcJ_G0003783.1 mouse_genomes_project 3 106044651 106045594 - Gm12523 antisense antisense MGP_BALBcJ_T0060322.1 MGP_BALBcJ_G0027106.1 mouse_genomes_project 3 28741999 29038353 + MGP_BALBcJ_P0060322 Kcnmb2 protein_coding protein_coding MGP_BALBcJ_T0060323.1 MGP_BALBcJ_G0027106.1 mouse_genomes_project 3 28997710 29036945 + MGP_BALBcJ_P0060323 Kcnmb2 protein_coding protein_coding MGP_BALBcJ_T0014044.1 MGP_BALBcJ_G0012141.1 mouse_genomes_project 3 56282751 56284563 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013939.1 MGP_BALBcJ_G0012036.1 mouse_genomes_project 3 20198811 20199187 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014014.1 MGP_BALBcJ_G0012111.1 mouse_genomes_project 3 47188601 47189190 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062114.1 MGP_BALBcJ_G0027495.1 mouse_genomes_project 3 90186023 90187361 - MGP_BALBcJ_P0062114 Lce1l protein_coding protein_coding MGP_BALBcJ_T0013968.1 MGP_BALBcJ_G0012065.1 mouse_genomes_project 3 33731491 33732098 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061137.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66809316 66811793 + Nmd3 protein_coding retained_intron MGP_BALBcJ_T0061138.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66809316 66843785 + MGP_BALBcJ_P0061138 Nmd3 protein_coding protein_coding MGP_BALBcJ_T0061139.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66809363 66822404 + MGP_BALBcJ_P0061139 Nmd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061140.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66809414 66817865 + MGP_BALBcJ_P0061140 Nmd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061141.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66809421 66819307 + Nmd3 protein_coding retained_intron MGP_BALBcJ_T0061142.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66809586 66813741 + MGP_BALBcJ_P0061142 Nmd3 protein_coding protein_coding MGP_BALBcJ_T0061143.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66811567 66827469 + Nmd3 protein_coding retained_intron MGP_BALBcJ_T0061144.1 MGP_BALBcJ_G0027270.1 mouse_genomes_project 3 66833859 66836472 + Nmd3 protein_coding retained_intron MGP_BALBcJ_T0011515.1 MGP_BALBcJ_G0009640.1 mouse_genomes_project 3 31447799 31448071 + Mir1897 misc_RNA misc_RNA MGP_BALBcJ_T0061012.1 MGP_BALBcJ_G0027241.1 mouse_genomes_project 3 61199411 61413210 - MGP_BALBcJ_P0061012 protein_coding protein_coding MGP_BALBcJ_T0007435.1 MGP_BALBcJ_G0006092.1 mouse_genomes_project 3 10289198 10291889 - Gm2464 lincRNA lincRNA MGP_BALBcJ_T0001201.1 MGP_BALBcJ_G0001124.1 mouse_genomes_project 3 49167618 49169688 + TEC TEC MGP_BALBcJ_T0099805.1 MGP_BALBcJ_G0037841.1 mouse_genomes_project 3 155283775 155283882 - Gm23725 snRNA snRNA MGP_BALBcJ_T0063387.1 MGP_BALBcJ_G0027792.1 mouse_genomes_project 3 115206207 115247506 - MGP_BALBcJ_P0063387 Plppr4 protein_coding protein_coding MGP_BALBcJ_T0063388.1 MGP_BALBcJ_G0027792.1 mouse_genomes_project 3 115208177 115247506 - Plppr4 protein_coding retained_intron MGP_BALBcJ_T0063389.1 MGP_BALBcJ_G0027792.1 mouse_genomes_project 3 115208988 115246878 - MGP_BALBcJ_P0063389 Plppr4 protein_coding protein_coding MGP_BALBcJ_T0007451.1 MGP_BALBcJ_G0006100.1 mouse_genomes_project 3 17188024 17189533 + Gm43525 lincRNA lincRNA MGP_BALBcJ_T0001122.1 MGP_BALBcJ_G0001047.1 mouse_genomes_project 3 27047701 27049959 - TEC TEC MGP_BALBcJ_T0007705.1 MGP_BALBcJ_G0006300.1 mouse_genomes_project 3 138787499 138788872 + 4930590L14Rik lincRNA lincRNA MGP_BALBcJ_T0101060.1 MGP_BALBcJ_G0039096.1 mouse_genomes_project 3 94305035 94305171 - Gm22581 snoRNA snoRNA MGP_BALBcJ_T0062115.1 MGP_BALBcJ_G0027496.1 mouse_genomes_project 3 90204298 90206156 - MGP_BALBcJ_P0062115 2310050C09Rik protein_coding protein_coding MGP_BALBcJ_T0001112.1 MGP_BALBcJ_G0001037.1 mouse_genomes_project 3 16029745 16030457 - TEC TEC MGP_BALBcJ_T0007429.1 MGP_BALBcJ_G0006088.1 mouse_genomes_project 3 6843854 6846853 - Gm38335 lincRNA lincRNA MGP_BALBcJ_T0102488.1 MGP_BALBcJ_G0040304.1 mouse_genomes_project 3 96524154 96533786 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061083.1 MGP_BALBcJ_G0027258.1 mouse_genomes_project 3 64952903 65712766 + MGP_BALBcJ_P0061083 Gm21949 protein_coding protein_coding MGP_BALBcJ_T0007431.1 MGP_BALBcJ_G0006090.1 mouse_genomes_project 3 10287731 10289122 - Gm2464 lincRNA lincRNA MGP_BALBcJ_T0014175.1 MGP_BALBcJ_G0012272.1 mouse_genomes_project 3 93428806 93431393 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007646.1 MGP_BALBcJ_G0006253.1 mouse_genomes_project 3 115150678 115151367 + Gm42891 lincRNA lincRNA MGP_BALBcJ_T0014335.1 MGP_BALBcJ_G0012432.1 mouse_genomes_project 3 140017838 140018178 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014011.1 MGP_BALBcJ_G0012108.1 mouse_genomes_project 3 46723467 46723930 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098913.1 MGP_BALBcJ_G0036960.1 mouse_genomes_project 3 101864269 101865926 - Gm42701 sense_intronic sense_intronic MGP_BALBcJ_T0062829.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101286182 101347980 + MGP_BALBcJ_P0062829 Syt6 protein_coding protein_coding MGP_BALBcJ_T0062830.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101286232 101352235 + MGP_BALBcJ_P0062830 Syt6 protein_coding protein_coding MGP_BALBcJ_T0062831.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101286233 101352235 + MGP_BALBcJ_P0062831 Syt6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062832.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101286251 101349825 + MGP_BALBcJ_P0062832 Syt6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062833.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101286329 101347961 + MGP_BALBcJ_P0062833 Syt6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062834.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101287757 101299672 + MGP_BALBcJ_P0062834 Syt6 protein_coding protein_coding MGP_BALBcJ_T0062835.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101287802 101352234 + MGP_BALBcJ_P0062835 Syt6 protein_coding protein_coding MGP_BALBcJ_T0062836.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101287818 101344638 + MGP_BALBcJ_P0062836 Syt6 protein_coding protein_coding MGP_BALBcJ_T0062837.1 MGP_BALBcJ_G0027666.1 mouse_genomes_project 3 101287818 101362359 + MGP_BALBcJ_P0062837 Syt6 protein_coding protein_coding MGP_BALBcJ_T0061507.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85381282 85412877 + MGP_BALBcJ_P0061507 Mef2d protein_coding protein_coding MGP_BALBcJ_T0061508.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85381326 85410721 + MGP_BALBcJ_P0061508 Mef2d protein_coding protein_coding MGP_BALBcJ_T0061509.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85381482 85409446 + MGP_BALBcJ_P0061509 Mef2d protein_coding protein_coding MGP_BALBcJ_T0061510.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85381482 85409446 + MGP_BALBcJ_P0061510 Mef2d protein_coding protein_coding MGP_BALBcJ_T0061511.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85381484 85395233 + Mef2d protein_coding retained_intron MGP_BALBcJ_T0061512.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85381540 85409144 + MGP_BALBcJ_P0061512 Mef2d protein_coding unknown_likely_coding MGP_BALBcJ_T0061513.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85402194 85409576 + Mef2d protein_coding processed_transcript MGP_BALBcJ_T0061514.1 MGP_BALBcJ_G0027357.1 mouse_genomes_project 3 85409042 85409697 + Mef2d protein_coding processed_transcript MGP_BALBcJ_T0064162.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144359401 144394754 + MGP_BALBcJ_P0064162 Ssx2ip protein_coding protein_coding MGP_BALBcJ_T0064163.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144359401 144394392 + MGP_BALBcJ_P0064163 Ssx2ip protein_coding protein_coding MGP_BALBcJ_T0064164.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144359423 144394743 + MGP_BALBcJ_P0064164 Ssx2ip protein_coding protein_coding MGP_BALBcJ_T0064165.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144359445 144393516 + MGP_BALBcJ_P0064165 Ssx2ip protein_coding protein_coding MGP_BALBcJ_T0064166.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144359450 144373093 + MGP_BALBcJ_P0064166 Ssx2ip protein_coding protein_coding MGP_BALBcJ_T0064167.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144359737 144374053 + MGP_BALBcJ_P0064167 Ssx2ip protein_coding protein_coding MGP_BALBcJ_T0064168.1 MGP_BALBcJ_G0027941.1 mouse_genomes_project 3 144384892 144387186 + Ssx2ip protein_coding retained_intron MGP_BALBcJ_T0061164.1 MGP_BALBcJ_G0027278.1 mouse_genomes_project 3 72422218 72615499 - MGP_BALBcJ_P0061164 Wdr49 protein_coding protein_coding MGP_BALBcJ_T0061165.1 MGP_BALBcJ_G0027278.1 mouse_genomes_project 3 72422218 72615830 - MGP_BALBcJ_P0061165 Wdr49 protein_coding unknown_likely_coding MGP_BALBcJ_T0061166.1 MGP_BALBcJ_G0027278.1 mouse_genomes_project 3 72531692 72586220 - MGP_BALBcJ_P0061166 Wdr49 protein_coding protein_coding MGP_BALBcJ_T0061167.1 MGP_BALBcJ_G0027278.1 mouse_genomes_project 3 72531692 72615500 - MGP_BALBcJ_P0061167 Wdr49 protein_coding protein_coding MGP_BALBcJ_T0061168.1 MGP_BALBcJ_G0027278.1 mouse_genomes_project 3 72613160 72615915 - Wdr49 protein_coding retained_intron MGP_BALBcJ_T0001126.1 MGP_BALBcJ_G0001051.1 mouse_genomes_project 3 27329322 27331410 - TEC TEC MGP_BALBcJ_T0099759.1 MGP_BALBcJ_G0037795.1 mouse_genomes_project 3 86176564 86176671 - Gm26465 snRNA snRNA MGP_BALBcJ_T0098937.1 MGP_BALBcJ_G0036984.1 mouse_genomes_project 3 142388134 142388907 - Gm43560 sense_intronic sense_intronic MGP_BALBcJ_T0001197.1 MGP_BALBcJ_G0001120.1 mouse_genomes_project 3 48869017 48869636 - TEC TEC MGP_BALBcJ_T0062948.1 MGP_BALBcJ_G0027690.1 mouse_genomes_project 3 103410834 103419930 - MGP_BALBcJ_P0062948 Ddx20 protein_coding protein_coding MGP_BALBcJ_T0062949.1 MGP_BALBcJ_G0027690.1 mouse_genomes_project 3 103412203 103419808 - MGP_BALBcJ_P0062949 Ddx20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062950.1 MGP_BALBcJ_G0027690.1 mouse_genomes_project 3 103414072 103419800 - Ddx20 protein_coding retained_intron MGP_BALBcJ_T0007487.1 MGP_BALBcJ_G0006133.1 mouse_genomes_project 3 34995803 35022417 - Gm43821 lincRNA lincRNA MGP_BALBcJ_T0004295.1 MGP_BALBcJ_G0003767.1 mouse_genomes_project 3 96933032 96939466 - Gm43120 antisense antisense MGP_BALBcJ_T0001359.1 MGP_BALBcJ_G0001281.1 mouse_genomes_project 3 133736068 133738319 + TEC TEC MGP_BALBcJ_T0102500.1 MGP_BALBcJ_G0040316.1 mouse_genomes_project 3 140511486 140521365 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060051.1 MGP_BALBcJ_G0027049.1 mouse_genomes_project 3 11494970 11516212 + MGP_BALBcJ_P0060051 Car13 protein_coding protein_coding MGP_BALBcJ_T0098935.1 MGP_BALBcJ_G0036982.1 mouse_genomes_project 3 142054769 142056860 - Gm43445 sense_intronic sense_intronic MGP_BALBcJ_T0014050.1 MGP_BALBcJ_G0012147.1 mouse_genomes_project 3 57253288 57254024 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064104.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036478 143040272 + Odf2l protein_coding retained_intron MGP_BALBcJ_T0064105.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036479 143072966 + MGP_BALBcJ_P0064105 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064106.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036479 143072946 + MGP_BALBcJ_P0064106 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064107.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036490 143055261 + Odf2l protein_coding retained_intron MGP_BALBcJ_T0064108.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036490 143072936 + MGP_BALBcJ_P0064108 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064109.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036498 143055173 + Odf2l protein_coding retained_intron MGP_BALBcJ_T0064110.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036510 143072940 + MGP_BALBcJ_P0064110 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064111.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036511 143046892 + MGP_BALBcJ_P0064111 Odf2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064112.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036864 143037520 + Odf2l protein_coding processed_transcript MGP_BALBcJ_T0064113.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143036864 143044032 + MGP_BALBcJ_P0064113 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064114.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143038536 143046884 + MGP_BALBcJ_P0064114 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064115.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143045747 143062037 + MGP_BALBcJ_P0064115 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064116.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143050501 143068130 + Odf2l protein_coding retained_intron MGP_BALBcJ_T0064117.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143057431 143068130 + Odf2l protein_coding retained_intron MGP_BALBcJ_T0064118.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143057640 143064980 + Odf2l protein_coding processed_transcript MGP_BALBcJ_T0064119.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143057649 143072944 + Odf2l protein_coding retained_intron MGP_BALBcJ_T0064120.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143057671 143068082 + MGP_BALBcJ_P0064120 Odf2l protein_coding protein_coding MGP_BALBcJ_T0064121.1 MGP_BALBcJ_G0027929.1 mouse_genomes_project 3 143068070 143072677 + MGP_BALBcJ_P0064121 Odf2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0007558.1 MGP_BALBcJ_G0006184.1 mouse_genomes_project 3 77189023 77350726 + A330069K06Rik lincRNA lincRNA MGP_BALBcJ_T0001324.1 MGP_BALBcJ_G0001247.1 mouse_genomes_project 3 124878172 124879058 - TEC TEC MGP_BALBcJ_T0061841.1 MGP_BALBcJ_G0027411.1 mouse_genomes_project 3 86630845 86633769 - MGP_BALBcJ_P0061841 Cks1b protein_coding protein_coding MGP_BALBcJ_T0061842.1 MGP_BALBcJ_G0027411.1 mouse_genomes_project 3 86630930 86633403 - MGP_BALBcJ_P0061842 Cks1b protein_coding protein_coding MGP_BALBcJ_T0061843.1 MGP_BALBcJ_G0027411.1 mouse_genomes_project 3 86631217 86633605 - MGP_BALBcJ_P0061843 Cks1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013996.1 MGP_BALBcJ_G0012093.1 mouse_genomes_project 3 41538876 41539258 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001189.1 MGP_BALBcJ_G0001113.1 mouse_genomes_project 3 48633512 48638477 - TEC TEC MGP_BALBcJ_T0062208.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92295263 92340641 + MGP_BALBcJ_P0062208 Pogz protein_coding protein_coding MGP_BALBcJ_T0062209.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92295393 92319887 + Pogz protein_coding processed_transcript MGP_BALBcJ_T0062210.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92295409 92324756 + Pogz protein_coding retained_intron MGP_BALBcJ_T0062211.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92295409 92340639 + MGP_BALBcJ_P0062211 Pogz protein_coding protein_coding MGP_BALBcJ_T0062212.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92295409 92338648 + MGP_BALBcJ_P0062212 Pogz protein_coding protein_coding MGP_BALBcJ_T0062213.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92295409 92339191 + MGP_BALBcJ_P0062213 Pogz protein_coding protein_coding MGP_BALBcJ_T0062214.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92322035 92322858 + Pogz protein_coding retained_intron MGP_BALBcJ_T0062215.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92322826 92330574 + MGP_BALBcJ_P0062215 Pogz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062216.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92329580 92332005 + Pogz protein_coding processed_transcript MGP_BALBcJ_T0062217.1 MGP_BALBcJ_G0027531.1 mouse_genomes_project 3 92335966 92337282 + Pogz protein_coding retained_intron MGP_BALBcJ_T0013970.1 MGP_BALBcJ_G0012067.1 mouse_genomes_project 3 34008482 34009335 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059953.1 MGP_BALBcJ_G0027017.1 mouse_genomes_project 3 1034651 1036944 + MGP_BALBcJ_P0059953 protein_coding protein_coding MGP_BALBcJ_T0060618.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38369421 38434603 + MGP_BALBcJ_P0060618 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060619.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38369431 38411113 + MGP_BALBcJ_P0060619 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060620.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38369450 38413922 + MGP_BALBcJ_P0060620 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060621.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38380302 38434597 + MGP_BALBcJ_P0060621 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060622.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38380344 38409066 + Jade1 protein_coding processed_transcript MGP_BALBcJ_T0060623.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38380540 38431797 + MGP_BALBcJ_P0060623 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060624.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38382232 38433853 + MGP_BALBcJ_P0060624 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060625.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38382276 38409064 + Jade1 protein_coding processed_transcript MGP_BALBcJ_T0060626.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38382298 38424417 + MGP_BALBcJ_P0060626 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060627.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38398227 38406335 + Jade1 protein_coding retained_intron MGP_BALBcJ_T0060628.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38409004 38417473 + Jade1 protein_coding retained_intron MGP_BALBcJ_T0060629.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38411104 38422286 + Jade1 protein_coding retained_intron MGP_BALBcJ_T0060630.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38413968 38422522 + MGP_BALBcJ_P0060630 Jade1 protein_coding protein_coding MGP_BALBcJ_T0060631.1 MGP_BALBcJ_G0027158.1 mouse_genomes_project 3 38420151 38422529 + Jade1 protein_coding processed_transcript MGP_BALBcJ_T0060052.1 MGP_BALBcJ_G0027050.1 mouse_genomes_project 3 11628670 11650949 - MGP_BALBcJ_P0060052 Car1 protein_coding protein_coding MGP_BALBcJ_T0060053.1 MGP_BALBcJ_G0027050.1 mouse_genomes_project 3 11628670 11680675 - MGP_BALBcJ_P0060053 Car1 protein_coding protein_coding MGP_BALBcJ_T0060054.1 MGP_BALBcJ_G0027050.1 mouse_genomes_project 3 11632789 11680678 - MGP_BALBcJ_P0060054 Car1 protein_coding protein_coding MGP_BALBcJ_T0060809.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025105 52050317 + MGP_BALBcJ_P0060809 Spg20 protein_coding protein_coding MGP_BALBcJ_T0060810.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025110 52042321 + Spg20 protein_coding retained_intron MGP_BALBcJ_T0060811.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025126 52050306 + MGP_BALBcJ_P0060811 Spg20 protein_coding protein_coding MGP_BALBcJ_T0060812.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025135 52027250 + Spg20 protein_coding retained_intron MGP_BALBcJ_T0060813.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025163 52050312 + MGP_BALBcJ_P0060813 Spg20 protein_coding protein_coding MGP_BALBcJ_T0060814.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025384 52042689 + MGP_BALBcJ_P0060814 Spg20 protein_coding protein_coding MGP_BALBcJ_T0060815.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52025593 52030258 + MGP_BALBcJ_P0060815 Spg20 protein_coding protein_coding MGP_BALBcJ_T0060816.1 MGP_BALBcJ_G0027193.1 mouse_genomes_project 3 52029172 52030330 + MGP_BALBcJ_P0060816 Spg20 protein_coding protein_coding MGP_BALBcJ_T0007599.1 MGP_BALBcJ_G0006212.1 mouse_genomes_project 3 93389676 93395362 + Gm26594 lincRNA lincRNA MGP_BALBcJ_T0007478.1 MGP_BALBcJ_G0006125.1 mouse_genomes_project 3 32111282 32133408 - Gm43003 lincRNA lincRNA MGP_BALBcJ_T0007593.1 MGP_BALBcJ_G0006206.1 mouse_genomes_project 3 89486797 89495090 + Gm43740 lincRNA lincRNA MGP_BALBcJ_T0014082.1 MGP_BALBcJ_G0012179.1 mouse_genomes_project 3 66411749 66412009 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099742.1 MGP_BALBcJ_G0037778.1 mouse_genomes_project 3 60706134 60706232 + Gm23500 snRNA snRNA MGP_BALBcJ_T0014304.1 MGP_BALBcJ_G0012401.1 mouse_genomes_project 3 132848431 132848885 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062275.1 MGP_BALBcJ_G0027539.1 mouse_genomes_project 3 92632968 92635926 + MGP_BALBcJ_P0062275 Tmod4 protein_coding protein_coding MGP_BALBcJ_T0062276.1 MGP_BALBcJ_G0027539.1 mouse_genomes_project 3 92633006 92637535 + MGP_BALBcJ_P0062276 Tmod4 protein_coding protein_coding MGP_BALBcJ_T0062277.1 MGP_BALBcJ_G0027539.1 mouse_genomes_project 3 92633007 92637531 + MGP_BALBcJ_P0062277 Tmod4 protein_coding protein_coding MGP_BALBcJ_T0062278.1 MGP_BALBcJ_G0027539.1 mouse_genomes_project 3 92634696 92637070 + Tmod4 protein_coding retained_intron MGP_BALBcJ_T0062279.1 MGP_BALBcJ_G0027539.1 mouse_genomes_project 3 92635442 92636139 + Tmod4 protein_coding processed_transcript MGP_BALBcJ_T0062280.1 MGP_BALBcJ_G0027539.1 mouse_genomes_project 3 92635925 92637534 + Tmod4 protein_coding retained_intron MGP_BALBcJ_T0014078.1 MGP_BALBcJ_G0012175.1 mouse_genomes_project 3 65413475 65414056 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101075.1 MGP_BALBcJ_G0039111.1 mouse_genomes_project 3 121412809 121412939 - Snora24 snoRNA snoRNA MGP_BALBcJ_T0014364.1 MGP_BALBcJ_G0012461.1 mouse_genomes_project 3 155941562 155941972 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014224.1 MGP_BALBcJ_G0012321.1 mouse_genomes_project 3 105746186 105746589 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007532.1 MGP_BALBcJ_G0006164.1 mouse_genomes_project 3 55011794 55033873 - 1700007F19Rik lincRNA lincRNA MGP_BALBcJ_T0061478.1 MGP_BALBcJ_G0027349.1 mouse_genomes_project 3 85186039 85190766 + MGP_BALBcJ_P0061478 Crabp2 protein_coding protein_coding MGP_BALBcJ_T0061479.1 MGP_BALBcJ_G0027349.1 mouse_genomes_project 3 85189533 85190375 + Crabp2 protein_coding retained_intron MGP_BALBcJ_T0014282.1 MGP_BALBcJ_G0012379.1 mouse_genomes_project 3 124148472 124149718 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013902.1 MGP_BALBcJ_G0011999.1 mouse_genomes_project 3 9794884 9795227 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007722.1 MGP_BALBcJ_G0006315.1 mouse_genomes_project 3 141741915 141816207 - Gm42707 lincRNA lincRNA MGP_BALBcJ_T0007724.1 MGP_BALBcJ_G0006315.1 mouse_genomes_project 3 141773851 141815831 - Gm42707 lincRNA lincRNA MGP_BALBcJ_T0014249.1 MGP_BALBcJ_G0012346.1 mouse_genomes_project 3 112703644 112704312 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001320.1 MGP_BALBcJ_G0001243.1 mouse_genomes_project 3 124622817 124626473 + TEC TEC MGP_BALBcJ_T0061263.1 MGP_BALBcJ_G0027299.1 mouse_genomes_project 3 79280321 79333538 - MGP_BALBcJ_P0061263 Gucy1a3 protein_coding protein_coding MGP_BALBcJ_T0061264.1 MGP_BALBcJ_G0027299.1 mouse_genomes_project 3 79280331 79334252 - MGP_BALBcJ_P0061264 Gucy1a3 protein_coding protein_coding MGP_BALBcJ_T0061265.1 MGP_BALBcJ_G0027299.1 mouse_genomes_project 3 79282450 79289904 - MGP_BALBcJ_P0061265 Gucy1a3 protein_coding protein_coding MGP_BALBcJ_T0061266.1 MGP_BALBcJ_G0027299.1 mouse_genomes_project 3 79294598 79334254 - Gucy1a3 protein_coding retained_intron MGP_BALBcJ_T0061267.1 MGP_BALBcJ_G0027299.1 mouse_genomes_project 3 79306965 79334070 - Gucy1a3 protein_coding processed_transcript MGP_BALBcJ_T0061852.1 MGP_BALBcJ_G0027413.1 mouse_genomes_project 3 86647754 86650284 + Pygo2 protein_coding processed_transcript MGP_BALBcJ_T0061853.1 MGP_BALBcJ_G0027413.1 mouse_genomes_project 3 86647801 86652669 + MGP_BALBcJ_P0061853 Pygo2 protein_coding protein_coding MGP_BALBcJ_T0061854.1 MGP_BALBcJ_G0027413.1 mouse_genomes_project 3 86647964 86648710 + Pygo2 protein_coding processed_transcript MGP_BALBcJ_T0061855.1 MGP_BALBcJ_G0027413.1 mouse_genomes_project 3 86648280 86650223 + Pygo2 protein_coding processed_transcript MGP_BALBcJ_T0061856.1 MGP_BALBcJ_G0027413.1 mouse_genomes_project 3 86648377 86652669 + MGP_BALBcJ_P0061856 Pygo2 protein_coding protein_coding MGP_BALBcJ_T0061857.1 MGP_BALBcJ_G0027413.1 mouse_genomes_project 3 86648572 86650533 + Pygo2 protein_coding processed_transcript MGP_BALBcJ_T0059979.1 MGP_BALBcJ_G0027026.1 mouse_genomes_project 3 5468431 5472328 - MGP_BALBcJ_P0059979 Hey1 protein_coding protein_coding MGP_BALBcJ_T0059980.1 MGP_BALBcJ_G0027026.1 mouse_genomes_project 3 5469771 5472056 - Hey1 protein_coding retained_intron MGP_BALBcJ_T0059981.1 MGP_BALBcJ_G0027026.1 mouse_genomes_project 3 5469868 5471697 - Hey1 protein_coding retained_intron MGP_BALBcJ_T0059982.1 MGP_BALBcJ_G0027026.1 mouse_genomes_project 3 5470614 5472036 - Hey1 protein_coding retained_intron MGP_BALBcJ_T0001305.1 MGP_BALBcJ_G0001228.1 mouse_genomes_project 3 120477677 120480226 - TEC TEC MGP_BALBcJ_T0001400.1 MGP_BALBcJ_G0001322.1 mouse_genomes_project 3 157901947 157904318 + TEC TEC MGP_BALBcJ_T0063558.1 MGP_BALBcJ_G0027825.1 mouse_genomes_project 3 122410120 122432494 - MGP_BALBcJ_P0063558 1700003H04Rik protein_coding protein_coding MGP_BALBcJ_T0063559.1 MGP_BALBcJ_G0027825.1 mouse_genomes_project 3 122410120 122432494 - MGP_BALBcJ_P0063559 1700003H04Rik protein_coding protein_coding MGP_BALBcJ_T0063560.1 MGP_BALBcJ_G0027825.1 mouse_genomes_project 3 122419773 122432495 - MGP_BALBcJ_P0063560 1700003H04Rik protein_coding protein_coding MGP_BALBcJ_T0063561.1 MGP_BALBcJ_G0027825.1 mouse_genomes_project 3 122424457 122432504 - MGP_BALBcJ_P0063561 1700003H04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063562.1 MGP_BALBcJ_G0027825.1 mouse_genomes_project 3 122424458 122429909 - MGP_BALBcJ_P0063562 1700003H04Rik protein_coding protein_coding MGP_BALBcJ_T0063563.1 MGP_BALBcJ_G0027825.1 mouse_genomes_project 3 122424458 122432497 - MGP_BALBcJ_P0063563 1700003H04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062089.1 MGP_BALBcJ_G0027473.1 mouse_genomes_project 3 89793242 89795923 - MGP_BALBcJ_P0062089 Sprr3 protein_coding protein_coding MGP_BALBcJ_T0004344.1 MGP_BALBcJ_G0003795.1 mouse_genomes_project 3 120780323 120840763 - 4933405D12Rik antisense antisense MGP_BALBcJ_T0004345.1 MGP_BALBcJ_G0003795.1 mouse_genomes_project 3 120798166 120840763 - 4933405D12Rik antisense antisense MGP_BALBcJ_T0098366.1 MGP_BALBcJ_G0036420.1 mouse_genomes_project 3 86566190 86567460 + pseudogene pseudogene MGP_BALBcJ_T0007511.1 MGP_BALBcJ_G0006148.1 mouse_genomes_project 3 47925453 47941329 - Gm29230 lincRNA lincRNA MGP_BALBcJ_T0001150.1 MGP_BALBcJ_G0001075.1 mouse_genomes_project 3 34609636 34612790 + TEC TEC MGP_BALBcJ_T0063541.1 MGP_BALBcJ_G0027820.1 mouse_genomes_project 3 121280217 121298253 - MGP_BALBcJ_P0063541 Mettl14 protein_coding protein_coding MGP_BALBcJ_T0063542.1 MGP_BALBcJ_G0027820.1 mouse_genomes_project 3 121280223 121298357 - MGP_BALBcJ_P0063542 Mettl14 protein_coding protein_coding MGP_BALBcJ_T0063543.1 MGP_BALBcJ_G0027820.1 mouse_genomes_project 3 121281428 121286897 - MGP_BALBcJ_P0063543 Mettl14 protein_coding protein_coding MGP_BALBcJ_T0063544.1 MGP_BALBcJ_G0027820.1 mouse_genomes_project 3 121298142 121298524 - Mettl14 protein_coding retained_intron MGP_BALBcJ_T0001248.1 MGP_BALBcJ_G0001171.1 mouse_genomes_project 3 82065296 82069196 + TEC TEC MGP_BALBcJ_T0062510.1 MGP_BALBcJ_G0027583.1 mouse_genomes_project 3 93781176 93781666 - MGP_BALBcJ_P0062510 Hist2h2aa2 protein_coding protein_coding MGP_BALBcJ_T0099776.1 MGP_BALBcJ_G0037812.1 mouse_genomes_project 3 100657884 100658049 - Gm22826 snRNA snRNA MGP_BALBcJ_T0061748.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418011 86422826 - MGP_BALBcJ_P0061748 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061749.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418013 86423363 - MGP_BALBcJ_P0061749 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061750.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418018 86419269 - MGP_BALBcJ_P0061750 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061751.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418019 86418597 - Mtx1 protein_coding retained_intron MGP_BALBcJ_T0061752.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418019 86419027 - Mtx1 protein_coding processed_transcript MGP_BALBcJ_T0061753.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418019 86423290 - MGP_BALBcJ_P0061753 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061754.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418021 86419054 - MGP_BALBcJ_P0061754 Mtx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061755.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418024 86422840 - MGP_BALBcJ_P0061755 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061756.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418145 86422773 - MGP_BALBcJ_P0061756 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061757.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418260 86422845 - MGP_BALBcJ_P0061757 Mtx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061758.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418288 86435904 - MGP_BALBcJ_P0061758 Mtx1 protein_coding protein_coding MGP_BALBcJ_T0061759.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418346 86419769 - Mtx1 protein_coding retained_intron MGP_BALBcJ_T0061760.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418578 86419656 - Mtx1 protein_coding retained_intron MGP_BALBcJ_T0061761.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418677 86422795 - Mtx1 protein_coding retained_intron MGP_BALBcJ_T0061762.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86418964 86422818 - MGP_BALBcJ_P0061762 Mtx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061763.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86419192 86422810 - Mtx1 protein_coding retained_intron MGP_BALBcJ_T0061764.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86419608 86422759 - MGP_BALBcJ_P0061764 Mtx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061771.1 MGP_BALBcJ_G0027395.1 mouse_genomes_project 3 86432950 86435940 - Mtx1 protein_coding processed_transcript MGP_BALBcJ_T0001237.1 MGP_BALBcJ_G0001160.1 mouse_genomes_project 3 72157994 72160214 - TEC TEC MGP_BALBcJ_T0007494.1 MGP_BALBcJ_G0006138.1 mouse_genomes_project 3 37373089 37391436 - 1700017G19Rik lincRNA lincRNA MGP_BALBcJ_T0007495.1 MGP_BALBcJ_G0006138.1 mouse_genomes_project 3 37376652 37377997 - 1700017G19Rik lincRNA lincRNA MGP_BALBcJ_T0064134.1 MGP_BALBcJ_G0027933.1 mouse_genomes_project 3 143703616 143839665 + MGP_BALBcJ_P0064134 Ddah1 protein_coding protein_coding MGP_BALBcJ_T0064135.1 MGP_BALBcJ_G0027933.1 mouse_genomes_project 3 143756253 143834755 + Ddah1 protein_coding processed_transcript MGP_BALBcJ_T0062822.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 100985273 101069959 + MGP_BALBcJ_P0062822 Trim33 protein_coding protein_coding MGP_BALBcJ_T0062823.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 100985764 101065926 + MGP_BALBcJ_P0062823 Trim33 protein_coding protein_coding MGP_BALBcJ_T0062824.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 101022134 101039831 + MGP_BALBcJ_P0062824 Trim33 protein_coding protein_coding MGP_BALBcJ_T0062825.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 101032139 101037119 + Trim33 protein_coding retained_intron MGP_BALBcJ_T0062826.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 101036775 101038128 + Trim33 protein_coding retained_intron MGP_BALBcJ_T0062827.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 101036867 101064386 + MGP_BALBcJ_P0062827 Trim33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062828.1 MGP_BALBcJ_G0027665.1 mouse_genomes_project 3 101052034 101065962 + MGP_BALBcJ_P0062828 Trim33 protein_coding protein_coding MGP_BALBcJ_T0063628.1 MGP_BALBcJ_G0027831.1 mouse_genomes_project 3 125439086 125457368 - MGP_BALBcJ_P0063628 protein_coding unknown_likely_coding MGP_BALBcJ_T0063629.1 MGP_BALBcJ_G0027831.1 mouse_genomes_project 3 125439092 125457471 - MGP_BALBcJ_P0063629 protein_coding protein_coding MGP_BALBcJ_T0063630.1 MGP_BALBcJ_G0027831.1 mouse_genomes_project 3 125446914 125451825 - protein_coding retained_intron MGP_BALBcJ_T0063632.1 MGP_BALBcJ_G0027831.1 mouse_genomes_project 3 125449227 125457319 - protein_coding retained_intron MGP_BALBcJ_T0063633.1 MGP_BALBcJ_G0027831.1 mouse_genomes_project 3 125451417 125457469 - MGP_BALBcJ_P0063633 protein_coding protein_coding MGP_BALBcJ_T0004358.1 MGP_BALBcJ_G0003806.1 mouse_genomes_project 3 129032070 129035311 - Gm43352 antisense antisense MGP_BALBcJ_T0014275.1 MGP_BALBcJ_G0012372.1 mouse_genomes_project 3 121059403 121060091 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010522.1 MGP_BALBcJ_G0008647.1 mouse_genomes_project 3 95291425 95291479 - Mir7225 miRNA miRNA MGP_BALBcJ_T0007568.1 MGP_BALBcJ_G0006193.1 mouse_genomes_project 3 80578464 80580841 + Gm38096 lincRNA lincRNA MGP_BALBcJ_T0001155.1 MGP_BALBcJ_G0001080.1 mouse_genomes_project 3 36522364 36525351 + TEC TEC MGP_BALBcJ_T0017923.1 MGP_BALBcJ_G0015446.1 mouse_genomes_project 3 79836279 79839164 - Gm29999 processed_transcript retained_intron MGP_BALBcJ_T0017924.1 MGP_BALBcJ_G0015446.1 mouse_genomes_project 3 79836425 79840955 - Gm29999 processed_transcript lincRNA MGP_BALBcJ_T0061858.1 MGP_BALBcJ_G0027414.1 mouse_genomes_project 3 86654252 86668498 + MGP_BALBcJ_P0061858 Pbxip1 protein_coding protein_coding MGP_BALBcJ_T0061859.1 MGP_BALBcJ_G0027414.1 mouse_genomes_project 3 86654258 86663075 + Pbxip1 protein_coding processed_transcript MGP_BALBcJ_T0061860.1 MGP_BALBcJ_G0027414.1 mouse_genomes_project 3 86654261 86663714 + MGP_BALBcJ_P0061860 Pbxip1 protein_coding protein_coding MGP_BALBcJ_T0061861.1 MGP_BALBcJ_G0027414.1 mouse_genomes_project 3 86654300 86663023 + MGP_BALBcJ_P0061861 Pbxip1 protein_coding protein_coding MGP_BALBcJ_T0061862.1 MGP_BALBcJ_G0027414.1 mouse_genomes_project 3 86654302 86663067 + MGP_BALBcJ_P0061862 Pbxip1 protein_coding protein_coding MGP_BALBcJ_T0102483.1 MGP_BALBcJ_G0040299.1 mouse_genomes_project 3 91033541 91033738 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0064075.1 MGP_BALBcJ_G0027919.1 mouse_genomes_project 3 142293157 142434296 - MGP_BALBcJ_P0064075 Hs2st1 protein_coding protein_coding MGP_BALBcJ_T0064076.1 MGP_BALBcJ_G0027919.1 mouse_genomes_project 3 142317414 142433996 - MGP_BALBcJ_P0064076 Hs2st1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064077.1 MGP_BALBcJ_G0027919.1 mouse_genomes_project 3 142431952 142434273 - Hs2st1 protein_coding retained_intron MGP_BALBcJ_T0014348.1 MGP_BALBcJ_G0012445.1 mouse_genomes_project 3 144760964 144761643 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060524.1 MGP_BALBcJ_G0027139.1 mouse_genomes_project 3 34121630 34131444 - MGP_BALBcJ_P0060524 Il21 protein_coding protein_coding MGP_BALBcJ_T0060525.1 MGP_BALBcJ_G0027139.1 mouse_genomes_project 3 34124162 34131391 - MGP_BALBcJ_P0060525 Il21 protein_coding protein_coding MGP_BALBcJ_T0060526.1 MGP_BALBcJ_G0027139.1 mouse_genomes_project 3 34129127 34131462 - Il21 protein_coding retained_intron MGP_BALBcJ_T0013982.1 MGP_BALBcJ_G0012079.1 mouse_genomes_project 3 36024498 36024871 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013896.1 MGP_BALBcJ_G0011993.1 mouse_genomes_project 3 7849933 7850687 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101055.1 MGP_BALBcJ_G0039091.1 mouse_genomes_project 3 86257196 86257326 - Gm24403 snoRNA snoRNA MGP_BALBcJ_T0060091.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16114238 16204791 - MGP_BALBcJ_P0060091 Pde7a protein_coding protein_coding MGP_BALBcJ_T0060092.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16115812 16157305 - MGP_BALBcJ_P0060092 Pde7a protein_coding protein_coding MGP_BALBcJ_T0060093.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16118515 16121160 - Pde7a protein_coding retained_intron MGP_BALBcJ_T0060094.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16118852 16124662 - Pde7a protein_coding processed_transcript MGP_BALBcJ_T0060095.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16121420 16152526 - MGP_BALBcJ_P0060095 Pde7a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060096.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16121492 16128044 - Pde7a protein_coding retained_intron MGP_BALBcJ_T0060097.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16124937 16204522 - MGP_BALBcJ_P0060097 Pde7a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060098.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16127995 16157262 - MGP_BALBcJ_P0060098 Pde7a protein_coding protein_coding MGP_BALBcJ_T0060099.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16148969 16204774 - Pde7a protein_coding retained_intron MGP_BALBcJ_T0060100.1 MGP_BALBcJ_G0027064.1 mouse_genomes_project 3 16149067 16204373 - Pde7a protein_coding processed_transcript MGP_BALBcJ_T0099723.1 MGP_BALBcJ_G0037759.1 mouse_genomes_project 3 16446507 16446671 + Gm23330 snRNA snRNA MGP_BALBcJ_T0007684.1 MGP_BALBcJ_G0006282.1 mouse_genomes_project 3 131637308 131643455 - lincRNA lincRNA MGP_BALBcJ_T0014007.1 MGP_BALBcJ_G0012104.1 mouse_genomes_project 3 46471896 46472458 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060782.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51635991 51642705 - MGP_BALBcJ_P0060782 Exosc8 protein_coding protein_coding MGP_BALBcJ_T0060783.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51635994 51636772 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060784.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51635995 51642349 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060785.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51637155 51642114 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060786.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51637167 51641625 - MGP_BALBcJ_P0060786 Exosc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060787.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51638622 51642679 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060788.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51639317 51642358 - MGP_BALBcJ_P0060788 Exosc8 protein_coding protein_coding MGP_BALBcJ_T0060789.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51639466 51641649 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060790.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51639476 51640548 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060791.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51640925 51642347 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0060792.1 MGP_BALBcJ_G0027187.1 mouse_genomes_project 3 51641254 51642347 - Exosc8 protein_coding retained_intron MGP_BALBcJ_T0007667.1 MGP_BALBcJ_G0006267.1 mouse_genomes_project 3 125880480 125882969 + Gm43053 lincRNA lincRNA MGP_BALBcJ_T0060910.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55981539 55998324 - MGP_BALBcJ_P0060910 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060911.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55982309 56021164 - MGP_BALBcJ_P0060911 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060912.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55982309 55998186 - MGP_BALBcJ_P0060912 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060913.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55982310 55998184 - MGP_BALBcJ_P0060913 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060914.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55982616 55998889 - MGP_BALBcJ_P0060914 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060915.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55983391 55998775 - MGP_BALBcJ_P0060915 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060916.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55983695 55998680 - MGP_BALBcJ_P0060916 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060917.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 55983710 56000012 - MGP_BALBcJ_P0060917 P2ry14 protein_coding protein_coding MGP_BALBcJ_T0060918.1 MGP_BALBcJ_G0027216.1 mouse_genomes_project 3 56013503 56021290 - P2ry14 protein_coding retained_intron MGP_BALBcJ_T0014191.1 MGP_BALBcJ_G0012288.1 mouse_genomes_project 3 97224024 97224679 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004214.1 MGP_BALBcJ_G0003708.1 mouse_genomes_project 3 34233441 34248104 - Fgf2os antisense antisense MGP_BALBcJ_T0063468.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 119936850 120074409 + MGP_BALBcJ_P0063468 Abca4 protein_coding unknown_likely_coding MGP_BALBcJ_T0063469.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 119937016 120074635 + MGP_BALBcJ_P0063469 Abca4 protein_coding protein_coding MGP_BALBcJ_T0063470.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 119939386 119990266 + Abca4 protein_coding processed_transcript MGP_BALBcJ_T0063471.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 119967098 119980580 + Abca4 protein_coding processed_transcript MGP_BALBcJ_T0063472.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120013055 120021887 + Abca4 protein_coding retained_intron MGP_BALBcJ_T0063473.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120014769 120019697 + Abca4 protein_coding retained_intron MGP_BALBcJ_T0063474.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120025231 120074637 + MGP_BALBcJ_P0063474 Abca4 protein_coding protein_coding MGP_BALBcJ_T0063475.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120056427 120058729 + Abca4 protein_coding retained_intron MGP_BALBcJ_T0063476.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120058227 120064897 + Abca4 protein_coding retained_intron MGP_BALBcJ_T0063477.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120064536 120065564 + Abca4 protein_coding processed_transcript MGP_BALBcJ_T0063478.1 MGP_BALBcJ_G0027806.1 mouse_genomes_project 3 120067581 120074699 + Abca4 protein_coding retained_intron MGP_BALBcJ_T0063041.1 MGP_BALBcJ_G0027715.1 mouse_genomes_project 3 104963418 104967524 + MGP_BALBcJ_P0063041 A630076J17Rik protein_coding protein_coding MGP_BALBcJ_T0013956.1 MGP_BALBcJ_G0012053.1 mouse_genomes_project 3 30540173 30543108 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062938.1 MGP_BALBcJ_G0027687.1 mouse_genomes_project 3 102728541 102781622 - MGP_BALBcJ_P0062938 Cttnbp2nl protein_coding protein_coding MGP_BALBcJ_T0062939.1 MGP_BALBcJ_G0027687.1 mouse_genomes_project 3 102728543 102781427 - MGP_BALBcJ_P0062939 Cttnbp2nl protein_coding protein_coding MGP_BALBcJ_T0062940.1 MGP_BALBcJ_G0027687.1 mouse_genomes_project 3 102732691 102781430 - MGP_BALBcJ_P0062940 Cttnbp2nl protein_coding protein_coding MGP_BALBcJ_T0062941.1 MGP_BALBcJ_G0027687.1 mouse_genomes_project 3 102732721 102781401 - Cttnbp2nl protein_coding retained_intron MGP_BALBcJ_T0014021.1 MGP_BALBcJ_G0012118.1 mouse_genomes_project 3 49313546 49313787 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063762.1 MGP_BALBcJ_G0027858.1 mouse_genomes_project 3 129215395 129230947 - MGP_BALBcJ_P0063762 Cyp2u1 protein_coding protein_coding MGP_BALBcJ_T0063763.1 MGP_BALBcJ_G0027858.1 mouse_genomes_project 3 129221010 129230923 - MGP_BALBcJ_P0063763 Cyp2u1 protein_coding protein_coding MGP_BALBcJ_T0063764.1 MGP_BALBcJ_G0027858.1 mouse_genomes_project 3 129222146 129230950 - Cyp2u1 protein_coding processed_transcript MGP_BALBcJ_T0060532.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34246417 34300155 + MGP_BALBcJ_P0060532 Fgf2 protein_coding protein_coding MGP_BALBcJ_T0060533.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34246724 34304886 + MGP_BALBcJ_P0060533 Fgf2 protein_coding protein_coding MGP_BALBcJ_T0060534.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34247213 34299575 + MGP_BALBcJ_P0060534 Fgf2 protein_coding protein_coding MGP_BALBcJ_T0060535.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34265761 34299575 + Fgf2 protein_coding processed_transcript MGP_BALBcJ_T0060536.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34280198 34299575 + Fgf2 protein_coding processed_transcript MGP_BALBcJ_T0060537.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34280294 34299575 + MGP_BALBcJ_P0060537 Fgf2 protein_coding protein_coding MGP_BALBcJ_T0060538.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34280294 34299575 + MGP_BALBcJ_P0060538 Fgf2 protein_coding protein_coding MGP_BALBcJ_T0060539.1 MGP_BALBcJ_G0027142.1 mouse_genomes_project 3 34299318 34299575 + Fgf2 protein_coding retained_intron MGP_BALBcJ_T0098902.1 MGP_BALBcJ_G0036949.1 mouse_genomes_project 3 100799031 100799987 + Gm43063 sense_intronic sense_intronic MGP_BALBcJ_T0063533.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121179308 121277488 + MGP_BALBcJ_P0063533 Sec24d protein_coding protein_coding MGP_BALBcJ_T0063534.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121179332 121190891 + Sec24d protein_coding retained_intron MGP_BALBcJ_T0063535.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121179343 121186263 + MGP_BALBcJ_P0063535 Sec24d protein_coding protein_coding MGP_BALBcJ_T0063536.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121201943 121277483 + Sec24d protein_coding retained_intron MGP_BALBcJ_T0063537.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121246308 121248249 + Sec24d protein_coding retained_intron MGP_BALBcJ_T0063538.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121248778 121261835 + Sec24d protein_coding processed_transcript MGP_BALBcJ_T0063539.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121266757 121267815 + Sec24d protein_coding retained_intron MGP_BALBcJ_T0063540.1 MGP_BALBcJ_G0027819.1 mouse_genomes_project 3 121276560 121277483 + Sec24d protein_coding retained_intron MGP_BALBcJ_T0007720.1 MGP_BALBcJ_G0006313.1 mouse_genomes_project 3 141608979 141693524 + Gm42705 lincRNA lincRNA MGP_BALBcJ_T0001120.1 MGP_BALBcJ_G0001045.1 mouse_genomes_project 3 26038994 26040356 + TEC TEC MGP_BALBcJ_T0060900.1 MGP_BALBcJ_G0027213.1 mouse_genomes_project 3 55710163 55745218 - MGP_BALBcJ_P0060900 Clrn1 protein_coding protein_coding MGP_BALBcJ_T0060901.1 MGP_BALBcJ_G0027213.1 mouse_genomes_project 3 55711350 55745218 - MGP_BALBcJ_P0060901 Clrn1 protein_coding protein_coding MGP_BALBcJ_T0060902.1 MGP_BALBcJ_G0027213.1 mouse_genomes_project 3 55712116 55745346 - MGP_BALBcJ_P0060902 Clrn1 protein_coding protein_coding MGP_BALBcJ_T0060903.1 MGP_BALBcJ_G0027213.1 mouse_genomes_project 3 55712498 55725793 - Clrn1 protein_coding retained_intron MGP_BALBcJ_T0062141.1 MGP_BALBcJ_G0027513.1 mouse_genomes_project 3 91142508 91143641 + MGP_BALBcJ_P0062141 protein_coding protein_coding MGP_BALBcJ_T0060277.1 MGP_BALBcJ_G0027097.1 mouse_genomes_project 3 27502621 27523800 - MGP_BALBcJ_P0060277 Lrrc31 protein_coding protein_coding MGP_BALBcJ_T0060278.1 MGP_BALBcJ_G0027097.1 mouse_genomes_project 3 27506243 27523813 - MGP_BALBcJ_P0060278 Lrrc31 protein_coding protein_coding MGP_BALBcJ_T0060279.1 MGP_BALBcJ_G0027097.1 mouse_genomes_project 3 27521916 27523738 - Lrrc31 protein_coding retained_intron MGP_BALBcJ_T0060280.1 MGP_BALBcJ_G0027097.1 mouse_genomes_project 3 27522091 27523780 - Lrrc31 protein_coding processed_transcript MGP_BALBcJ_T0101021.1 MGP_BALBcJ_G0039057.1 mouse_genomes_project 3 19243534 19243663 - Gm26354 snoRNA snoRNA MGP_BALBcJ_T0004240.1 MGP_BALBcJ_G0003729.1 mouse_genomes_project 3 62387135 62411568 - A730090N16Rik antisense antisense MGP_BALBcJ_T0014310.1 MGP_BALBcJ_G0012407.1 mouse_genomes_project 3 133406742 133407301 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062681.1 MGP_BALBcJ_G0027636.1 mouse_genomes_project 3 97562220 97631980 + Spag17 protein_coding processed_transcript MGP_BALBcJ_T0062682.1 MGP_BALBcJ_G0027636.1 mouse_genomes_project 3 97562231 97822397 + MGP_BALBcJ_P0062682 Spag17 protein_coding protein_coding MGP_BALBcJ_T0062683.1 MGP_BALBcJ_G0027636.1 mouse_genomes_project 3 97702973 97708037 + Spag17 protein_coding retained_intron MGP_BALBcJ_T0062684.1 MGP_BALBcJ_G0027636.1 mouse_genomes_project 3 97707980 97719151 + Spag17 protein_coding retained_intron MGP_BALBcJ_T0001211.1 MGP_BALBcJ_G0001134.1 mouse_genomes_project 3 52427365 52429383 + TEC TEC MGP_BALBcJ_T0062106.1 MGP_BALBcJ_G0027488.1 mouse_genomes_project 3 90071967 90073413 - MGP_BALBcJ_P0062106 Gm38119 protein_coding protein_coding MGP_BALBcJ_T0004370.1 MGP_BALBcJ_G0003814.1 mouse_genomes_project 3 135962025 135972871 + Gm43691 antisense antisense MGP_BALBcJ_T0101082.1 MGP_BALBcJ_G0039118.1 mouse_genomes_project 3 140648472 140648565 + Gm25965 snoRNA snoRNA MGP_BALBcJ_T0062247.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92513375 92518593 - Zfp687 protein_coding retained_intron MGP_BALBcJ_T0062248.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92513487 92522025 - MGP_BALBcJ_P0062248 Zfp687 protein_coding protein_coding MGP_BALBcJ_T0062249.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92513617 92522010 - Zfp687 protein_coding retained_intron MGP_BALBcJ_T0062250.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92513617 92522191 - Zfp687 protein_coding retained_intron MGP_BALBcJ_T0062251.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92513622 92522224 - MGP_BALBcJ_P0062251 Zfp687 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062252.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92518625 92522235 - MGP_BALBcJ_P0062252 Zfp687 protein_coding protein_coding MGP_BALBcJ_T0062253.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92518754 92522011 - MGP_BALBcJ_P0062253 Zfp687 protein_coding protein_coding MGP_BALBcJ_T0062254.1 MGP_BALBcJ_G0027535.1 mouse_genomes_project 3 92518959 92522005 - MGP_BALBcJ_P0062254 Zfp687 protein_coding protein_coding MGP_BALBcJ_T0062515.1 MGP_BALBcJ_G0027588.1 mouse_genomes_project 3 93835228 93846011 - MGP_BALBcJ_P0062515 Fcgr1 protein_coding protein_coding MGP_BALBcJ_T0062516.1 MGP_BALBcJ_G0027588.1 mouse_genomes_project 3 93836850 93844769 - MGP_BALBcJ_P0062516 Fcgr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062625.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95290740 95494903 - MGP_BALBcJ_P0062625 Pde4dip protein_coding protein_coding MGP_BALBcJ_T0062626.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95290746 95295940 - Pde4dip protein_coding processed_transcript MGP_BALBcJ_T0062627.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95290781 95494903 - MGP_BALBcJ_P0062627 Pde4dip protein_coding protein_coding MGP_BALBcJ_T0062628.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95295897 95298184 - Pde4dip protein_coding processed_transcript MGP_BALBcJ_T0062629.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95343734 95372884 - MGP_BALBcJ_P0062629 Pde4dip protein_coding protein_coding MGP_BALBcJ_T0062630.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95345697 95372806 - MGP_BALBcJ_P0062630 Pde4dip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062631.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95351577 95473610 - MGP_BALBcJ_P0062631 Pde4dip protein_coding protein_coding MGP_BALBcJ_T0062632.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95401497 95431317 - MGP_BALBcJ_P0062632 Pde4dip protein_coding protein_coding MGP_BALBcJ_T0062633.1 MGP_BALBcJ_G0027617.1 mouse_genomes_project 3 95427677 95473559 - Pde4dip protein_coding retained_intron MGP_BALBcJ_T0001286.1 MGP_BALBcJ_G0001209.1 mouse_genomes_project 3 109578438 109580049 + TEC TEC MGP_BALBcJ_T0013931.1 MGP_BALBcJ_G0012028.1 mouse_genomes_project 3 17656314 17657908 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004355.1 MGP_BALBcJ_G0003803.1 mouse_genomes_project 3 127637520 127648863 + Gm42697 antisense antisense MGP_BALBcJ_T0014201.1 MGP_BALBcJ_G0012298.1 mouse_genomes_project 3 99763123 99763808 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063278.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111478299 111503208 - MGP_BALBcJ_P0063278 Rnpc3 protein_coding protein_coding MGP_BALBcJ_T0063279.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111478617 111503092 - MGP_BALBcJ_P0063279 Rnpc3 protein_coding protein_coding MGP_BALBcJ_T0063280.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111478696 111503208 - MGP_BALBcJ_P0063280 Rnpc3 protein_coding protein_coding MGP_BALBcJ_T0063281.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111479568 111503208 - MGP_BALBcJ_P0063281 Rnpc3 protein_coding protein_coding MGP_BALBcJ_T0063282.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111484365 111488499 - Rnpc3 protein_coding processed_transcript MGP_BALBcJ_T0063283.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111489611 111495024 - Rnpc3 protein_coding processed_transcript MGP_BALBcJ_T0063284.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111489860 111494375 - Rnpc3 protein_coding processed_transcript MGP_BALBcJ_T0063285.1 MGP_BALBcJ_G0027770.1 mouse_genomes_project 3 111500136 111503138 - Rnpc3 protein_coding retained_intron MGP_BALBcJ_T0004218.1 MGP_BALBcJ_G0003712.1 mouse_genomes_project 3 42245536 42270101 - 1700027H10Rik antisense antisense MGP_BALBcJ_T0007727.1 MGP_BALBcJ_G0006319.1 mouse_genomes_project 3 142180204 142181739 + Gm43447 lincRNA lincRNA MGP_BALBcJ_T0061610.1 MGP_BALBcJ_G0027376.1 mouse_genomes_project 3 85837228 85845850 + MGP_BALBcJ_P0061610 Ssr2 protein_coding protein_coding MGP_BALBcJ_T0061611.1 MGP_BALBcJ_G0027376.1 mouse_genomes_project 3 85840708 85851831 + MGP_BALBcJ_P0061611 Ssr2 protein_coding protein_coding MGP_BALBcJ_T0061612.1 MGP_BALBcJ_G0027376.1 mouse_genomes_project 3 85840741 85851431 + MGP_BALBcJ_P0061612 Ssr2 protein_coding protein_coding MGP_BALBcJ_T0061613.1 MGP_BALBcJ_G0027376.1 mouse_genomes_project 3 85840767 85851445 + MGP_BALBcJ_P0061613 Ssr2 protein_coding protein_coding MGP_BALBcJ_T0061614.1 MGP_BALBcJ_G0027376.1 mouse_genomes_project 3 85840771 85851831 + MGP_BALBcJ_P0061614 Ssr2 protein_coding protein_coding MGP_BALBcJ_T0010509.1 MGP_BALBcJ_G0008634.1 mouse_genomes_project 3 85699726 85699799 - Mir7011 miRNA miRNA MGP_BALBcJ_T0004394.1 MGP_BALBcJ_G0003832.1 mouse_genomes_project 3 154950160 154967236 - Gm15577 antisense antisense MGP_BALBcJ_T0062145.1 MGP_BALBcJ_G0027515.1 mouse_genomes_project 3 91727038 91732292 + MGP_BALBcJ_P0062145 Them5 protein_coding protein_coding MGP_BALBcJ_T0062146.1 MGP_BALBcJ_G0027515.1 mouse_genomes_project 3 91727198 91732290 + MGP_BALBcJ_P0062146 Them5 protein_coding protein_coding MGP_BALBcJ_T0061644.1 MGP_BALBcJ_G0027378.1 mouse_genomes_project 3 85915336 85916581 - MGP_BALBcJ_P0061644 Rxfp4 protein_coding protein_coding MGP_BALBcJ_T0062611.1 MGP_BALBcJ_G0027612.1 mouse_genomes_project 3 95008581 95009544 - MGP_BALBcJ_P0062611 Olfr1402 protein_coding protein_coding MGP_BALBcJ_T0099750.1 MGP_BALBcJ_G0037786.1 mouse_genomes_project 3 80881456 80881563 + Gm24584 snRNA snRNA MGP_BALBcJ_T0007634.1 MGP_BALBcJ_G0006242.1 mouse_genomes_project 3 105928193 105947592 + Gm12524 lincRNA lincRNA MGP_BALBcJ_T0004200.1 MGP_BALBcJ_G0003700.1 mouse_genomes_project 3 29780072 29824648 + Gm37459 antisense antisense MGP_BALBcJ_T0004201.1 MGP_BALBcJ_G0003700.1 mouse_genomes_project 3 29816042 29821183 + Gm37459 antisense antisense MGP_BALBcJ_T0001244.1 MGP_BALBcJ_G0001167.1 mouse_genomes_project 3 75584453 75586093 - TEC TEC MGP_BALBcJ_T0099797.1 MGP_BALBcJ_G0037833.1 mouse_genomes_project 3 136191568 136191727 + Gm23467 snRNA snRNA MGP_BALBcJ_T0004271.1 MGP_BALBcJ_G0003752.1 mouse_genomes_project 3 91753685 91763140 - Gm43306 antisense antisense MGP_BALBcJ_T0061136.1 MGP_BALBcJ_G0027269.1 mouse_genomes_project 3 66659631 66684633 - MGP_BALBcJ_P0061136 B3galnt1 protein_coding protein_coding MGP_BALBcJ_T0007449.1 MGP_BALBcJ_G0006099.1 mouse_genomes_project 3 16776432 16777509 + 4632415L05Rik lincRNA lincRNA MGP_BALBcJ_T0007450.1 MGP_BALBcJ_G0006099.1 mouse_genomes_project 3 16776444 16780429 + 4632415L05Rik lincRNA lincRNA MGP_BALBcJ_T0013940.1 MGP_BALBcJ_G0012037.1 mouse_genomes_project 3 21848385 21848668 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063647.1 MGP_BALBcJ_G0027836.1 mouse_genomes_project 3 125695067 125704276 + MGP_BALBcJ_P0063647 Tifa protein_coding protein_coding MGP_BALBcJ_T0063648.1 MGP_BALBcJ_G0027836.1 mouse_genomes_project 3 125695172 125738024 + Tifa protein_coding processed_transcript MGP_BALBcJ_T0063649.1 MGP_BALBcJ_G0027836.1 mouse_genomes_project 3 125695174 125703845 + MGP_BALBcJ_P0063649 Tifa protein_coding protein_coding MGP_BALBcJ_T0063650.1 MGP_BALBcJ_G0027836.1 mouse_genomes_project 3 125695984 125703845 + MGP_BALBcJ_P0063650 Tifa protein_coding protein_coding MGP_BALBcJ_T0063651.1 MGP_BALBcJ_G0027836.1 mouse_genomes_project 3 125696133 125704276 + MGP_BALBcJ_P0063651 Tifa protein_coding protein_coding MGP_BALBcJ_T0001288.1 MGP_BALBcJ_G0001211.1 mouse_genomes_project 3 114403437 114403876 + TEC TEC MGP_BALBcJ_T0060851.1 MGP_BALBcJ_G0027200.1 mouse_genomes_project 3 54170181 54186487 - MGP_BALBcJ_P0060851 Tm4sf1 protein_coding protein_coding MGP_BALBcJ_T0060852.1 MGP_BALBcJ_G0027200.1 mouse_genomes_project 3 54170181 54179460 - MGP_BALBcJ_P0060852 Tm4sf1 protein_coding protein_coding MGP_BALBcJ_T0060853.1 MGP_BALBcJ_G0027200.1 mouse_genomes_project 3 54172054 54186539 - MGP_BALBcJ_P0060853 Tm4sf1 protein_coding protein_coding MGP_BALBcJ_T0060854.1 MGP_BALBcJ_G0027200.1 mouse_genomes_project 3 54172086 54179123 - Tm4sf1 protein_coding processed_transcript MGP_BALBcJ_T0060855.1 MGP_BALBcJ_G0027200.1 mouse_genomes_project 3 54177353 54179696 - MGP_BALBcJ_P0060855 Tm4sf1 protein_coding protein_coding MGP_BALBcJ_T0060856.1 MGP_BALBcJ_G0027200.1 mouse_genomes_project 3 54177389 54178274 - Tm4sf1 protein_coding retained_intron MGP_BALBcJ_T0013877.1 MGP_BALBcJ_G0011974.1 mouse_genomes_project 3 3118265 3118383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004356.1 MGP_BALBcJ_G0003804.1 mouse_genomes_project 3 127654043 127658872 + Gm42650 antisense antisense MGP_BALBcJ_T0007460.1 MGP_BALBcJ_G0006109.1 mouse_genomes_project 3 25627101 25629620 - Gm32950 lincRNA lincRNA MGP_BALBcJ_T0013965.1 MGP_BALBcJ_G0012062.1 mouse_genomes_project 3 33324917 33325464 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014250.1 MGP_BALBcJ_G0012347.1 mouse_genomes_project 3 113036318 113036739 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007600.1 MGP_BALBcJ_G0006213.1 mouse_genomes_project 3 93823918 93830014 + Gm42743 lincRNA lincRNA MGP_BALBcJ_T0061828.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86590728 86600271 - MGP_BALBcJ_P0061828 Zbtb7b protein_coding protein_coding MGP_BALBcJ_T0061829.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86590728 86607018 - MGP_BALBcJ_P0061829 Zbtb7b protein_coding protein_coding MGP_BALBcJ_T0061830.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86590728 86605784 - MGP_BALBcJ_P0061830 Zbtb7b protein_coding protein_coding MGP_BALBcJ_T0061831.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86590728 86600753 - MGP_BALBcJ_P0061831 Zbtb7b protein_coding protein_coding MGP_BALBcJ_T0061832.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86594222 86607581 - MGP_BALBcJ_P0061832 Zbtb7b protein_coding protein_coding MGP_BALBcJ_T0061833.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86594506 86607538 - MGP_BALBcJ_P0061833 Zbtb7b protein_coding protein_coding MGP_BALBcJ_T0061834.1 MGP_BALBcJ_G0027408.1 mouse_genomes_project 3 86606227 86608679 - Zbtb7b protein_coding processed_transcript MGP_BALBcJ_T0062071.1 MGP_BALBcJ_G0027458.1 mouse_genomes_project 3 89394256 89397113 - MGP_BALBcJ_P0062071 Lor protein_coding protein_coding MGP_BALBcJ_T0001283.1 MGP_BALBcJ_G0001206.1 mouse_genomes_project 3 106318389 106319827 + TEC TEC MGP_BALBcJ_T0063789.1 MGP_BALBcJ_G0027865.1 mouse_genomes_project 3 130715052 130783929 - MGP_BALBcJ_P0063789 Npnt protein_coding protein_coding MGP_BALBcJ_T0063790.1 MGP_BALBcJ_G0027865.1 mouse_genomes_project 3 130715069 130783681 - MGP_BALBcJ_P0063790 Npnt protein_coding protein_coding MGP_BALBcJ_T0063791.1 MGP_BALBcJ_G0027865.1 mouse_genomes_project 3 130715990 130783798 - MGP_BALBcJ_P0063791 Npnt protein_coding protein_coding MGP_BALBcJ_T0063792.1 MGP_BALBcJ_G0027865.1 mouse_genomes_project 3 130717737 130783681 - MGP_BALBcJ_P0063792 Npnt protein_coding protein_coding MGP_BALBcJ_T0063793.1 MGP_BALBcJ_G0027865.1 mouse_genomes_project 3 130717737 130783681 - MGP_BALBcJ_P0063793 Npnt protein_coding protein_coding MGP_BALBcJ_T0063794.1 MGP_BALBcJ_G0027865.1 mouse_genomes_project 3 130724483 130739663 - Npnt protein_coding retained_intron MGP_BALBcJ_T0062976.1 MGP_BALBcJ_G0027697.1 mouse_genomes_project 3 103696266 103702851 + Wdr77 protein_coding retained_intron MGP_BALBcJ_T0062977.1 MGP_BALBcJ_G0027697.1 mouse_genomes_project 3 103696272 103706796 + MGP_BALBcJ_P0062977 Wdr77 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062978.1 MGP_BALBcJ_G0027697.1 mouse_genomes_project 3 103696342 103704081 + MGP_BALBcJ_P0062978 Wdr77 protein_coding protein_coding MGP_BALBcJ_T0062979.1 MGP_BALBcJ_G0027697.1 mouse_genomes_project 3 103701207 103702310 + Wdr77 protein_coding retained_intron MGP_BALBcJ_T0060937.1 MGP_BALBcJ_G0027225.1 mouse_genomes_project 3 56923753 56937153 + Aadac protein_coding processed_transcript MGP_BALBcJ_T0060938.1 MGP_BALBcJ_G0027225.1 mouse_genomes_project 3 56929749 56938809 + MGP_BALBcJ_P0060938 Aadac protein_coding protein_coding MGP_BALBcJ_T0060939.1 MGP_BALBcJ_G0027225.1 mouse_genomes_project 3 56929864 56933895 + Aadac protein_coding retained_intron MGP_BALBcJ_T0014334.1 MGP_BALBcJ_G0012431.1 mouse_genomes_project 3 138703907 138704271 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061027.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62733148 62755164 + MGP_BALBcJ_P0061027 Lekr1 protein_coding protein_coding MGP_BALBcJ_T0061028.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62733155 62753209 + Lekr1 protein_coding processed_transcript MGP_BALBcJ_T0061029.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62733166 62810395 + Lekr1 protein_coding processed_transcript MGP_BALBcJ_T0061030.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62733188 62735357 + Lekr1 protein_coding retained_intron MGP_BALBcJ_T0061031.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62733202 62837814 + Lekr1 protein_coding processed_transcript MGP_BALBcJ_T0061032.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62733237 62799256 + Lekr1 protein_coding processed_transcript MGP_BALBcJ_T0061033.1 MGP_BALBcJ_G0027246.1 mouse_genomes_project 3 62753037 62895536 + Lekr1 protein_coding processed_transcript MGP_BALBcJ_T0007682.1 MGP_BALBcJ_G0006280.1 mouse_genomes_project 3 131143652 131146143 - Gm43254 lincRNA lincRNA MGP_BALBcJ_T0063933.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135786844 135839235 - MGP_BALBcJ_P0063933 Dapp1 protein_coding protein_coding MGP_BALBcJ_T0063934.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135786845 135839226 - MGP_BALBcJ_P0063934 Dapp1 protein_coding protein_coding MGP_BALBcJ_T0063935.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135788540 135813051 - Dapp1 protein_coding processed_transcript MGP_BALBcJ_T0063936.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135788843 135811895 - Dapp1 protein_coding processed_transcript MGP_BALBcJ_T0063937.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135788954 135839220 - Dapp1 protein_coding processed_transcript MGP_BALBcJ_T0063938.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135806904 135811895 - Dapp1 protein_coding processed_transcript MGP_BALBcJ_T0063939.1 MGP_BALBcJ_G0027890.1 mouse_genomes_project 3 135838394 135839226 - Dapp1 protein_coding retained_intron MGP_BALBcJ_T0063147.1 MGP_BALBcJ_G0027743.1 mouse_genomes_project 3 105973094 105988270 - MGP_BALBcJ_P0063147 Sypl2 protein_coding protein_coding MGP_BALBcJ_T0063148.1 MGP_BALBcJ_G0027743.1 mouse_genomes_project 3 105978923 105988265 - Sypl2 protein_coding retained_intron MGP_BALBcJ_T0062513.1 MGP_BALBcJ_G0027586.1 mouse_genomes_project 3 93822707 93823351 + MGP_BALBcJ_P0062513 Hist2h3c2 protein_coding protein_coding MGP_BALBcJ_T0063040.1 MGP_BALBcJ_G0027714.1 mouse_genomes_project 3 104944131 104954527 - MGP_BALBcJ_P0063040 Cym protein_coding protein_coding MGP_BALBcJ_T0063698.1 MGP_BALBcJ_G0027845.1 mouse_genomes_project 3 127735974 127742459 - MGP_BALBcJ_P0063698 Gar1 protein_coding protein_coding MGP_BALBcJ_T0063699.1 MGP_BALBcJ_G0027845.1 mouse_genomes_project 3 127735978 127740429 - MGP_BALBcJ_P0063699 Gar1 protein_coding protein_coding MGP_BALBcJ_T0063700.1 MGP_BALBcJ_G0027845.1 mouse_genomes_project 3 127735981 127736737 - Gar1 protein_coding retained_intron MGP_BALBcJ_T0063701.1 MGP_BALBcJ_G0027845.1 mouse_genomes_project 3 127736614 127738343 - Gar1 protein_coding retained_intron MGP_BALBcJ_T0063702.1 MGP_BALBcJ_G0027845.1 mouse_genomes_project 3 127736633 127742423 - Gar1 protein_coding processed_transcript MGP_BALBcJ_T0063703.1 MGP_BALBcJ_G0027845.1 mouse_genomes_project 3 127737905 127741995 - MGP_BALBcJ_P0063703 Gar1 protein_coding protein_coding MGP_BALBcJ_T0001215.1 MGP_BALBcJ_G0001138.1 mouse_genomes_project 3 53035225 53037135 - TEC TEC MGP_BALBcJ_T0061902.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225105 87229614 - MGP_BALBcJ_P0061902 Hax1 protein_coding protein_coding MGP_BALBcJ_T0061903.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225108 87228895 - MGP_BALBcJ_P0061903 Hax1 protein_coding unknown_likely_coding MGP_BALBcJ_T0061904.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225112 87229583 - MGP_BALBcJ_P0061904 Hax1 protein_coding protein_coding MGP_BALBcJ_T0061905.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225115 87226870 - Hax1 protein_coding retained_intron MGP_BALBcJ_T0061906.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225115 87229594 - MGP_BALBcJ_P0061906 Hax1 protein_coding protein_coding MGP_BALBcJ_T0061907.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225116 87229603 - Hax1 protein_coding retained_intron MGP_BALBcJ_T0061908.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225253 87229537 - MGP_BALBcJ_P0061908 Hax1 protein_coding protein_coding MGP_BALBcJ_T0061909.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87225284 87229306 - MGP_BALBcJ_P0061909 Hax1 protein_coding protein_coding MGP_BALBcJ_T0061910.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87226810 87229597 - MGP_BALBcJ_P0061910 Hax1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061911.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87228436 87229697 - Hax1 protein_coding retained_intron MGP_BALBcJ_T0061912.1 MGP_BALBcJ_G0027423.1 mouse_genomes_project 3 87228686 87229279 - MGP_BALBcJ_P0061912 Hax1 protein_coding protein_coding MGP_BALBcJ_T0060659.1 MGP_BALBcJ_G0027162.1 mouse_genomes_project 3 43319139 43325298 - MGP_BALBcJ_P0060659 Pabpc4l protein_coding protein_coding MGP_BALBcJ_T0060660.1 MGP_BALBcJ_G0027162.1 mouse_genomes_project 3 43319139 43325020 - MGP_BALBcJ_P0060660 Pabpc4l protein_coding protein_coding MGP_BALBcJ_T0060661.1 MGP_BALBcJ_G0027162.1 mouse_genomes_project 3 43323769 43325020 - MGP_BALBcJ_P0060661 Pabpc4l protein_coding protein_coding MGP_BALBcJ_T0060662.1 MGP_BALBcJ_G0027162.1 mouse_genomes_project 3 43324133 43324999 - MGP_BALBcJ_P0060662 Pabpc4l protein_coding protein_coding MGP_BALBcJ_T0007606.1 MGP_BALBcJ_G0006219.1 mouse_genomes_project 3 95536359 95575149 + Gm5544 lincRNA lincRNA MGP_BALBcJ_T0001270.1 MGP_BALBcJ_G0001193.1 mouse_genomes_project 3 95008581 95009544 + TEC TEC MGP_BALBcJ_T0098884.1 MGP_BALBcJ_G0036931.1 mouse_genomes_project 3 91933991 91934869 - Gm43774 sense_intronic sense_intronic MGP_BALBcJ_T0014075.1 MGP_BALBcJ_G0012172.1 mouse_genomes_project 3 64688779 64689727 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099792.1 MGP_BALBcJ_G0037828.1 mouse_genomes_project 3 130366403 130366509 - Gm25307 snRNA snRNA MGP_BALBcJ_T0007483.1 MGP_BALBcJ_G0006130.1 mouse_genomes_project 3 34515534 34516898 + 4930594O21Rik lincRNA lincRNA MGP_BALBcJ_T0007484.1 MGP_BALBcJ_G0006130.1 mouse_genomes_project 3 34515544 34516448 + 4930594O21Rik lincRNA lincRNA MGP_BALBcJ_T0060324.1 MGP_BALBcJ_G0027107.1 mouse_genomes_project 3 29170361 29201187 - MGP_BALBcJ_P0060324 Zmat3 protein_coding protein_coding MGP_BALBcJ_T0060325.1 MGP_BALBcJ_G0027107.1 mouse_genomes_project 3 29170365 29201129 - MGP_BALBcJ_P0060325 Zmat3 protein_coding protein_coding MGP_BALBcJ_T0060326.1 MGP_BALBcJ_G0027107.1 mouse_genomes_project 3 29196644 29200969 - MGP_BALBcJ_P0060326 Zmat3 protein_coding protein_coding MGP_BALBcJ_T0060327.1 MGP_BALBcJ_G0027107.1 mouse_genomes_project 3 29197774 29201523 - Zmat3 protein_coding retained_intron MGP_BALBcJ_T0014252.1 MGP_BALBcJ_G0012349.1 mouse_genomes_project 3 113805733 113806898 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004276.1 MGP_BALBcJ_G0003756.1 mouse_genomes_project 3 92505580 92511226 - Gm15265 antisense antisense MGP_BALBcJ_T0004277.1 MGP_BALBcJ_G0003756.1 mouse_genomes_project 3 92505614 92511649 - Gm15265 antisense antisense MGP_BALBcJ_T0007728.1 MGP_BALBcJ_G0006320.1 mouse_genomes_project 3 143584301 143586472 + Gm17501 lincRNA lincRNA MGP_BALBcJ_T0007729.1 MGP_BALBcJ_G0006320.1 mouse_genomes_project 3 143586092 143620540 + Gm17501 lincRNA lincRNA MGP_BALBcJ_T0098936.1 MGP_BALBcJ_G0036983.1 mouse_genomes_project 3 142358551 142361738 - Gm43707 sense_intronic sense_intronic MGP_BALBcJ_T0061683.1 MGP_BALBcJ_G0027385.1 mouse_genomes_project 3 86156343 86287971 + MGP_BALBcJ_P0061683 Ash1l protein_coding protein_coding MGP_BALBcJ_T0061685.1 MGP_BALBcJ_G0027385.1 mouse_genomes_project 3 86171624 86287969 + MGP_BALBcJ_P0061685 Ash1l protein_coding protein_coding MGP_BALBcJ_T0061686.1 MGP_BALBcJ_G0027385.1 mouse_genomes_project 3 86230873 86236298 + Ash1l protein_coding retained_intron MGP_BALBcJ_T0061687.1 MGP_BALBcJ_G0027385.1 mouse_genomes_project 3 86261034 86263998 + Ash1l protein_coding retained_intron MGP_BALBcJ_T0007603.1 MGP_BALBcJ_G0006216.1 mouse_genomes_project 3 93981869 93982734 - 4930477E14Rik lincRNA lincRNA MGP_BALBcJ_T0063063.1 MGP_BALBcJ_G0027722.1 mouse_genomes_project 3 105290111 105291498 - MGP_BALBcJ_P0063063 Ubl4b protein_coding protein_coding MGP_BALBcJ_T0063392.1 MGP_BALBcJ_G0027794.1 mouse_genomes_project 3 115674873 115740404 - MGP_BALBcJ_P0063392 Snx7 protein_coding protein_coding MGP_BALBcJ_T0063393.1 MGP_BALBcJ_G0027794.1 mouse_genomes_project 3 115674999 115761777 - MGP_BALBcJ_P0063393 Snx7 protein_coding protein_coding MGP_BALBcJ_T0063394.1 MGP_BALBcJ_G0027794.1 mouse_genomes_project 3 115674999 115761861 - MGP_BALBcJ_P0063394 Snx7 protein_coding protein_coding MGP_BALBcJ_T0063395.1 MGP_BALBcJ_G0027794.1 mouse_genomes_project 3 115720559 115724752 - Snx7 protein_coding retained_intron MGP_BALBcJ_T0010549.1 MGP_BALBcJ_G0008674.1 mouse_genomes_project 3 151323942 151324054 + Gm27405 miRNA miRNA MGP_BALBcJ_T0061152.1 MGP_BALBcJ_G0027274.1 mouse_genomes_project 3 70165422 70175653 - MGP_BALBcJ_P0061152 Slitrk3 protein_coding protein_coding MGP_BALBcJ_T0061153.1 MGP_BALBcJ_G0027274.1 mouse_genomes_project 3 70166287 70176514 - MGP_BALBcJ_P0061153 Slitrk3 protein_coding protein_coding MGP_BALBcJ_T0014161.1 MGP_BALBcJ_G0012258.1 mouse_genomes_project 3 90637108 90637563 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062054.1 MGP_BALBcJ_G0027449.1 mouse_genomes_project 3 87862166 87865418 + MGP_BALBcJ_P0062054 S100a5 protein_coding protein_coding MGP_BALBcJ_T0062055.1 MGP_BALBcJ_G0027449.1 mouse_genomes_project 3 87863447 87865418 + MGP_BALBcJ_P0062055 S100a5 protein_coding protein_coding MGP_BALBcJ_T0060081.1 MGP_BALBcJ_G0027061.1 mouse_genomes_project 3 14944456 15118548 - MGP_BALBcJ_P0060081 Cyp7b1 protein_coding protein_coding MGP_BALBcJ_T0004259.1 MGP_BALBcJ_G0003743.1 mouse_genomes_project 3 86047446 86105223 - antisense antisense MGP_BALBcJ_T0061190.1 MGP_BALBcJ_G0027283.1 mouse_genomes_project 3 76187893 76282291 - MGP_BALBcJ_P0061190 Rapgef2 protein_coding protein_coding MGP_BALBcJ_T0061191.1 MGP_BALBcJ_G0027283.1 mouse_genomes_project 3 76187904 76283187 - MGP_BALBcJ_P0061191 Rapgef2 protein_coding protein_coding MGP_BALBcJ_T0061192.1 MGP_BALBcJ_G0027283.1 mouse_genomes_project 3 76187907 76425047 - MGP_BALBcJ_P0061192 Rapgef2 protein_coding protein_coding MGP_BALBcJ_T0061193.1 MGP_BALBcJ_G0027283.1 mouse_genomes_project 3 76244889 76310836 - Rapgef2 protein_coding retained_intron MGP_BALBcJ_T0061194.1 MGP_BALBcJ_G0027283.1 mouse_genomes_project 3 76247989 76310938 - Rapgef2 protein_coding processed_transcript MGP_BALBcJ_T0061195.1 MGP_BALBcJ_G0027283.1 mouse_genomes_project 3 76307006 76318982 - Rapgef2 protein_coding retained_intron MGP_BALBcJ_T0007620.1 MGP_BALBcJ_G0006231.1 mouse_genomes_project 3 100406326 100407591 + Gm42682 lincRNA lincRNA MGP_BALBcJ_T0064344.1 MGP_BALBcJ_G0027966.1 mouse_genomes_project 3 150826366 150994422 - MGP_BALBcJ_P0064344 St6galnac5 protein_coding protein_coding MGP_BALBcJ_T0064345.1 MGP_BALBcJ_G0027966.1 mouse_genomes_project 3 150987540 150994228 - St6galnac5 protein_coding processed_transcript MGP_BALBcJ_T0007695.1 MGP_BALBcJ_G0006292.1 mouse_genomes_project 3 135544475 135552637 + Gm42610 lincRNA lincRNA MGP_BALBcJ_T0061530.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571187 85577478 + MGP_BALBcJ_P0061530 Glmp protein_coding protein_coding MGP_BALBcJ_T0061531.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571219 85575676 + Glmp protein_coding retained_intron MGP_BALBcJ_T0061532.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571222 85572743 + Glmp protein_coding retained_intron MGP_BALBcJ_T0061533.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571224 85573752 + Glmp protein_coding retained_intron MGP_BALBcJ_T0061534.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571236 85572632 + MGP_BALBcJ_P0061534 Glmp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061535.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571246 85574528 + MGP_BALBcJ_P0061535 Glmp protein_coding protein_coding MGP_BALBcJ_T0061536.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571246 85574533 + MGP_BALBcJ_P0061536 Glmp protein_coding protein_coding MGP_BALBcJ_T0061537.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85571246 85574533 + MGP_BALBcJ_P0061537 Glmp protein_coding protein_coding MGP_BALBcJ_T0061538.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85572208 85574483 + Glmp protein_coding retained_intron MGP_BALBcJ_T0061539.1 MGP_BALBcJ_G0027362.1 mouse_genomes_project 3 85574237 85574746 + MGP_BALBcJ_P0061539 Glmp protein_coding protein_coding MGP_BALBcJ_T0099726.1 MGP_BALBcJ_G0037762.1 mouse_genomes_project 3 32618757 32618862 + Gm25696 snRNA snRNA MGP_BALBcJ_T0007691.1 MGP_BALBcJ_G0006288.1 mouse_genomes_project 3 134314852 134328945 - 1700030L20Rik lincRNA lincRNA MGP_BALBcJ_T0061406.1 MGP_BALBcJ_G0027336.1 mouse_genomes_project 3 84653816 84687543 + MGP_BALBcJ_P0061406 Fcrl5 protein_coding protein_coding MGP_BALBcJ_T0061407.1 MGP_BALBcJ_G0027336.1 mouse_genomes_project 3 84653856 84719383 + MGP_BALBcJ_P0061407 Fcrl5 protein_coding protein_coding MGP_BALBcJ_T0061408.1 MGP_BALBcJ_G0027336.1 mouse_genomes_project 3 84653928 84678253 + MGP_BALBcJ_P0061408 Fcrl5 protein_coding protein_coding MGP_BALBcJ_T0061409.1 MGP_BALBcJ_G0027336.1 mouse_genomes_project 3 84653928 84678253 + MGP_BALBcJ_P0061409 Fcrl5 protein_coding protein_coding MGP_BALBcJ_T0061410.1 MGP_BALBcJ_G0027336.1 mouse_genomes_project 3 84653928 84678253 + MGP_BALBcJ_P0061410 Fcrl5 protein_coding protein_coding MGP_BALBcJ_T0014288.1 MGP_BALBcJ_G0012385.1 mouse_genomes_project 3 127191832 127192596 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001105.1 MGP_BALBcJ_G0001030.1 mouse_genomes_project 3 7065968 7066465 + TEC TEC MGP_BALBcJ_T0007531.1 MGP_BALBcJ_G0006163.1 mouse_genomes_project 3 54986633 55035139 + 4921539H07Rik lincRNA lincRNA MGP_BALBcJ_T0007533.1 MGP_BALBcJ_G0006163.1 mouse_genomes_project 3 55033997 55037682 + 4921539H07Rik lincRNA lincRNA MGP_BALBcJ_T0014257.1 MGP_BALBcJ_G0012354.1 mouse_genomes_project 3 114991948 114992629 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007681.1 MGP_BALBcJ_G0006279.1 mouse_genomes_project 3 130671013 130711904 - Gm29811 lincRNA lincRNA MGP_BALBcJ_T0014105.1 MGP_BALBcJ_G0012202.1 mouse_genomes_project 3 73174466 73175257 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062904.1 MGP_BALBcJ_G0027679.1 mouse_genomes_project 3 102356232 102375862 + MGP_BALBcJ_P0062904 Slc16a1 protein_coding protein_coding MGP_BALBcJ_T0013958.1 MGP_BALBcJ_G0012055.1 mouse_genomes_project 3 30989033 30989919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099804.1 MGP_BALBcJ_G0037840.1 mouse_genomes_project 3 153824282 153824386 - Gm23038 snRNA snRNA MGP_BALBcJ_T0001354.1 MGP_BALBcJ_G0001276.1 mouse_genomes_project 3 130889240 130891032 - TEC TEC MGP_BALBcJ_T0064133.1 MGP_BALBcJ_G0027932.1 mouse_genomes_project 3 143580964 143583972 - MGP_BALBcJ_P0064133 Cyr61 protein_coding protein_coding MGP_BALBcJ_T0014181.1 MGP_BALBcJ_G0012278.1 mouse_genomes_project 3 94244200 94244680 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014229.1 MGP_BALBcJ_G0012326.1 mouse_genomes_project 3 106658301 106658452 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101687.1 MGP_BALBcJ_G0039672.1 mouse_genomes_project 3 91719339 91720036 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101688.1 MGP_BALBcJ_G0039672.1 mouse_genomes_project 3 91719515 91720278 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0014293.1 MGP_BALBcJ_G0012390.1 mouse_genomes_project 3 128765101 128765613 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001302.1 MGP_BALBcJ_G0001225.1 mouse_genomes_project 3 119650315 119653027 - TEC TEC MGP_BALBcJ_T0001341.1 MGP_BALBcJ_G0001263.1 mouse_genomes_project 3 127449480 127451151 + TEC TEC MGP_BALBcJ_T0007636.1 MGP_BALBcJ_G0006244.1 mouse_genomes_project 3 106122347 106123022 + Gm12525 lincRNA lincRNA MGP_BALBcJ_T0062618.1 MGP_BALBcJ_G0027615.1 mouse_genomes_project 3 95259339 95271949 + MGP_BALBcJ_P0062618 Prkab2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062619.1 MGP_BALBcJ_G0027615.1 mouse_genomes_project 3 95259360 95272083 + MGP_BALBcJ_P0062619 Prkab2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062620.1 MGP_BALBcJ_G0027615.1 mouse_genomes_project 3 95259543 95274965 + MGP_BALBcJ_P0062620 Prkab2 protein_coding unknown_likely_coding MGP_BALBcJ_T0062621.1 MGP_BALBcJ_G0027615.1 mouse_genomes_project 3 95267679 95274255 + Prkab2 protein_coding retained_intron MGP_BALBcJ_T0062622.1 MGP_BALBcJ_G0027615.1 mouse_genomes_project 3 95268489 95274231 + Prkab2 protein_coding retained_intron MGP_BALBcJ_T0062623.1 MGP_BALBcJ_G0027615.1 mouse_genomes_project 3 95271347 95272198 + Prkab2 protein_coding processed_transcript MGP_BALBcJ_T0062079.1 MGP_BALBcJ_G0027464.1 mouse_genomes_project 3 89648969 89650435 + MGP_BALBcJ_P0062079 Sprr2b protein_coding protein_coding MGP_BALBcJ_T0004293.1 MGP_BALBcJ_G0003766.1 mouse_genomes_project 3 95333620 95339456 + Gm43076 antisense antisense MGP_BALBcJ_T0004294.1 MGP_BALBcJ_G0003766.1 mouse_genomes_project 3 95333810 95336355 + Gm43076 antisense antisense MGP_BALBcJ_T0010521.1 MGP_BALBcJ_G0008646.1 mouse_genomes_project 3 93761890 93762031 + Gm44492 miRNA miRNA MGP_BALBcJ_T0062092.1 MGP_BALBcJ_G0027476.1 mouse_genomes_project 3 89869566 89871565 - MGP_BALBcJ_P0062092 2310046K23Rik protein_coding protein_coding MGP_BALBcJ_T0061518.1 MGP_BALBcJ_G0027360.1 mouse_genomes_project 3 85524177 85542913 - MGP_BALBcJ_P0061518 Tsacc protein_coding protein_coding MGP_BALBcJ_T0061519.1 MGP_BALBcJ_G0027360.1 mouse_genomes_project 3 85524180 85542752 - MGP_BALBcJ_P0061519 Tsacc protein_coding protein_coding MGP_BALBcJ_T0014316.1 MGP_BALBcJ_G0012413.1 mouse_genomes_project 3 134227370 134227529 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001173.1 MGP_BALBcJ_G0001098.1 mouse_genomes_project 3 47544602 47548688 - TEC TEC MGP_BALBcJ_T0001134.1 MGP_BALBcJ_G0001059.1 mouse_genomes_project 3 30226220 30227686 - TEC TEC MGP_BALBcJ_T0101026.1 MGP_BALBcJ_G0039062.1 mouse_genomes_project 3 34704656 34704765 - Gm26404 snoRNA snoRNA MGP_BALBcJ_T0060571.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37515628 37528235 + MGP_BALBcJ_P0060571 Hspa4l protein_coding protein_coding MGP_BALBcJ_T0060572.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37516544 37552567 + MGP_BALBcJ_P0060572 Hspa4l protein_coding protein_coding MGP_BALBcJ_T0060573.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37516592 37568229 + MGP_BALBcJ_P0060573 Hspa4l protein_coding protein_coding MGP_BALBcJ_T0060574.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37516646 37532002 + MGP_BALBcJ_P0060574 Hspa4l protein_coding protein_coding MGP_BALBcJ_T0060575.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37516745 37529762 + Hspa4l protein_coding retained_intron MGP_BALBcJ_T0060576.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37517030 37560724 + MGP_BALBcJ_P0060576 Hspa4l protein_coding protein_coding MGP_BALBcJ_T0060577.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37543630 37552809 + Hspa4l protein_coding retained_intron MGP_BALBcJ_T0060578.1 MGP_BALBcJ_G0027151.1 mouse_genomes_project 3 37555269 37558080 + Hspa4l protein_coding retained_intron MGP_BALBcJ_T0099772.1 MGP_BALBcJ_G0037808.1 mouse_genomes_project 3 93919604 93919769 - Rnu1b2 snRNA snRNA MGP_BALBcJ_T0014106.1 MGP_BALBcJ_G0012203.1 mouse_genomes_project 3 73974473 73974812 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014213.1 MGP_BALBcJ_G0012310.1 mouse_genomes_project 3 102351993 102352336 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011530.1 MGP_BALBcJ_G0009655.1 mouse_genomes_project 3 122713553 122713851 + Gm23673 misc_RNA misc_RNA MGP_BALBcJ_T0007461.1 MGP_BALBcJ_G0006110.1 mouse_genomes_project 3 25679241 25680139 - lincRNA lincRNA MGP_BALBcJ_T0101677.1 MGP_BALBcJ_G0039668.1 mouse_genomes_project 3 11419231 11419511 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0098882.1 MGP_BALBcJ_G0036929.1 mouse_genomes_project 3 91799312 91804198 + Gm42463 sense_intronic sense_intronic MGP_BALBcJ_T0007517.1 MGP_BALBcJ_G0006153.1 mouse_genomes_project 3 49399634 49432776 + Gm30173 lincRNA lincRNA MGP_BALBcJ_T0001361.1 MGP_BALBcJ_G0001283.1 mouse_genomes_project 3 134587445 134588968 + TEC TEC MGP_BALBcJ_T0062051.1 MGP_BALBcJ_G0027447.1 mouse_genomes_project 3 87855141 87859563 + MGP_BALBcJ_P0062051 Gm42674 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062270.1 MGP_BALBcJ_G0027538.1 mouse_genomes_project 3 92619500 92631545 + MGP_BALBcJ_P0062270 Vps72 protein_coding protein_coding MGP_BALBcJ_T0062271.1 MGP_BALBcJ_G0027538.1 mouse_genomes_project 3 92619520 92626882 + Vps72 protein_coding processed_transcript MGP_BALBcJ_T0062272.1 MGP_BALBcJ_G0027538.1 mouse_genomes_project 3 92619551 92631215 + Vps72 protein_coding processed_transcript MGP_BALBcJ_T0062273.1 MGP_BALBcJ_G0027538.1 mouse_genomes_project 3 92623410 92627907 + Vps72 protein_coding processed_transcript MGP_BALBcJ_T0062274.1 MGP_BALBcJ_G0027538.1 mouse_genomes_project 3 92625270 92628026 + Vps72 protein_coding retained_intron MGP_BALBcJ_T0063484.1 MGP_BALBcJ_G0027808.1 mouse_genomes_project 3 120171816 120182702 + MGP_BALBcJ_P0063484 Dnttip2 protein_coding protein_coding MGP_BALBcJ_T0063485.1 MGP_BALBcJ_G0027808.1 mouse_genomes_project 3 120171846 120173639 + Dnttip2 protein_coding processed_transcript MGP_BALBcJ_T0063486.1 MGP_BALBcJ_G0027808.1 mouse_genomes_project 3 120173445 120182680 + Dnttip2 protein_coding processed_transcript MGP_BALBcJ_T0063487.1 MGP_BALBcJ_G0027808.1 mouse_genomes_project 3 120174201 120177042 + Dnttip2 protein_coding retained_intron MGP_BALBcJ_T0063488.1 MGP_BALBcJ_G0027808.1 mouse_genomes_project 3 120178005 120182529 + Dnttip2 protein_coding retained_intron MGP_BALBcJ_T0004292.1 MGP_BALBcJ_G0003765.1 mouse_genomes_project 3 94593921 94595971 - 9230114J08Rik antisense antisense MGP_BALBcJ_T0014132.1 MGP_BALBcJ_G0012229.1 mouse_genomes_project 3 83464262 83464663 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101683.1 MGP_BALBcJ_G0039671.1 mouse_genomes_project 3 62567137 62591225 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101684.1 MGP_BALBcJ_G0039671.1 mouse_genomes_project 3 62578471 62592412 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101685.1 MGP_BALBcJ_G0039671.1 mouse_genomes_project 3 62590531 62592254 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101686.1 MGP_BALBcJ_G0039671.1 mouse_genomes_project 3 62590565 62592420 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0102451.1 MGP_BALBcJ_G0040267.1 mouse_genomes_project 3 361573 362001 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060781.1 MGP_BALBcJ_G0027186.1 mouse_genomes_project 3 51620627 51621804 - MGP_BALBcJ_P0060781 Gm21958 protein_coding protein_coding MGP_BALBcJ_T0014361.1 MGP_BALBcJ_G0012458.1 mouse_genomes_project 3 154108032 154109580 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001360.1 MGP_BALBcJ_G0001282.1 mouse_genomes_project 3 133747559 133751404 + TEC TEC MGP_BALBcJ_T0001271.1 MGP_BALBcJ_G0001194.1 mouse_genomes_project 3 95211217 95215124 + TEC TEC MGP_BALBcJ_T0099745.1 MGP_BALBcJ_G0037781.1 mouse_genomes_project 3 63151868 63152021 - Gm26442 snRNA snRNA MGP_BALBcJ_T0004285.1 MGP_BALBcJ_G0003760.1 mouse_genomes_project 3 93711958 93716910 - Gm17690 antisense antisense MGP_BALBcJ_T0004286.1 MGP_BALBcJ_G0003760.1 mouse_genomes_project 3 93715870 93716912 - Gm17690 antisense antisense MGP_BALBcJ_T0061054.1 MGP_BALBcJ_G0027250.1 mouse_genomes_project 3 64026399 64037727 - MGP_BALBcJ_P0061054 Shox2 protein_coding protein_coding MGP_BALBcJ_T0061055.1 MGP_BALBcJ_G0027250.1 mouse_genomes_project 3 64026454 64038180 - MGP_BALBcJ_P0061055 Shox2 protein_coding protein_coding MGP_BALBcJ_T0061056.1 MGP_BALBcJ_G0027250.1 mouse_genomes_project 3 64028322 64037671 - MGP_BALBcJ_P0061056 Shox2 protein_coding protein_coding MGP_BALBcJ_T0061057.1 MGP_BALBcJ_G0027250.1 mouse_genomes_project 3 64028570 64033489 - MGP_BALBcJ_P0061057 Shox2 protein_coding protein_coding MGP_BALBcJ_T0004258.1 MGP_BALBcJ_G0003742.1 mouse_genomes_project 3 85942776 85944176 - Gm43714 antisense antisense MGP_BALBcJ_T0014238.1 MGP_BALBcJ_G0012335.1 mouse_genomes_project 3 110006250 110006551 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063574.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124482319 124569969 + Camk2d protein_coding processed_transcript MGP_BALBcJ_T0063575.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124482968 124729648 + MGP_BALBcJ_P0063575 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063576.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124482977 124729646 + MGP_BALBcJ_P0063576 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063577.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483015 124729652 + MGP_BALBcJ_P0063577 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063578.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483022 124703436 + MGP_BALBcJ_P0063578 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063579.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483024 124731061 + MGP_BALBcJ_P0063579 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063580.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483026 124654008 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063581.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483027 124725197 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063582.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483027 124696562 + MGP_BALBcJ_P0063582 Camk2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063583.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483037 124727450 + MGP_BALBcJ_P0063583 Camk2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063584.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483052 124728565 + Camk2d protein_coding processed_transcript MGP_BALBcJ_T0063585.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483114 124728438 + MGP_BALBcJ_P0063585 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063586.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483223 124731030 + MGP_BALBcJ_P0063586 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063587.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483325 124727957 + MGP_BALBcJ_P0063587 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063588.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483358 124570666 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063589.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483416 124728419 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063590.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124483431 124729062 + MGP_BALBcJ_P0063590 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063591.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124663059 124669618 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063592.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124663635 124695334 + Camk2d protein_coding processed_transcript MGP_BALBcJ_T0063593.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124668866 124693166 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063594.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124680049 124724996 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063595.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124682920 124728748 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063596.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124686409 124726287 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063597.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124686409 124726287 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063598.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124687616 124727914 + MGP_BALBcJ_P0063598 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063599.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124689201 124691575 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063600.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124690537 124727633 + MGP_BALBcJ_P0063600 Camk2d protein_coding protein_coding MGP_BALBcJ_T0063601.1 MGP_BALBcJ_G0027829.1 mouse_genomes_project 3 124691842 124694935 + Camk2d protein_coding retained_intron MGP_BALBcJ_T0063045.1 MGP_BALBcJ_G0027717.1 mouse_genomes_project 3 105012409 105017630 + MGP_BALBcJ_P0063045 Lamtor5 protein_coding protein_coding MGP_BALBcJ_T0063046.1 MGP_BALBcJ_G0027717.1 mouse_genomes_project 3 105012550 105017633 + MGP_BALBcJ_P0063046 Lamtor5 protein_coding protein_coding MGP_BALBcJ_T0061293.1 MGP_BALBcJ_G0027308.1 mouse_genomes_project 3 80312154 80530161 + MGP_BALBcJ_P0061293 Dchs2 protein_coding protein_coding MGP_BALBcJ_T0010542.1 MGP_BALBcJ_G0008667.1 mouse_genomes_project 3 134687659 134687776 - Gm44327 miRNA miRNA MGP_BALBcJ_T0063295.1 MGP_BALBcJ_G0027773.1 mouse_genomes_project 3 113581288 113585954 - MGP_BALBcJ_P0063295 S1pr1 protein_coding protein_coding MGP_BALBcJ_T0013966.1 MGP_BALBcJ_G0012063.1 mouse_genomes_project 3 33443972 33444671 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101904.1 MGP_BALBcJ_G0039790.1 mouse_genomes_project 3 56644788 56707941 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101905.1 MGP_BALBcJ_G0039790.1 mouse_genomes_project 3 56691803 56717515 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0064180.1 MGP_BALBcJ_G0027944.1 mouse_genomes_project 3 144453807 144459573 + MGP_BALBcJ_P0064180 Gng5 protein_coding protein_coding MGP_BALBcJ_T0064181.1 MGP_BALBcJ_G0027944.1 mouse_genomes_project 3 144453890 144459548 + MGP_BALBcJ_P0064181 Gng5 protein_coding protein_coding MGP_BALBcJ_T0064182.1 MGP_BALBcJ_G0027944.1 mouse_genomes_project 3 144454109 144459549 + MGP_BALBcJ_P0064182 Gng5 protein_coding protein_coding MGP_BALBcJ_T0060046.1 MGP_BALBcJ_G0027048.1 mouse_genomes_project 3 11458825 11465866 - MGP_BALBcJ_P0060046 1810022K09Rik protein_coding protein_coding MGP_BALBcJ_T0060047.1 MGP_BALBcJ_G0027048.1 mouse_genomes_project 3 11458830 11465802 - MGP_BALBcJ_P0060047 1810022K09Rik protein_coding protein_coding MGP_BALBcJ_T0060048.1 MGP_BALBcJ_G0027048.1 mouse_genomes_project 3 11458830 11465842 - MGP_BALBcJ_P0060048 1810022K09Rik protein_coding protein_coding MGP_BALBcJ_T0060049.1 MGP_BALBcJ_G0027048.1 mouse_genomes_project 3 11458834 11465835 - MGP_BALBcJ_P0060049 1810022K09Rik protein_coding protein_coding MGP_BALBcJ_T0060050.1 MGP_BALBcJ_G0027048.1 mouse_genomes_project 3 11463764 11465824 - 1810022K09Rik protein_coding retained_intron MGP_BALBcJ_T0013999.1 MGP_BALBcJ_G0012096.1 mouse_genomes_project 3 42629774 42630033 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062540.1 MGP_BALBcJ_G0027598.1 mouse_genomes_project 3 94212471 94230099 + MGP_BALBcJ_P0062540 Gm42957 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063751.1 MGP_BALBcJ_G0027855.1 mouse_genomes_project 3 128848487 128850188 - MGP_BALBcJ_P0063751 protein_coding protein_coding MGP_BALBcJ_T0063507.1 MGP_BALBcJ_G0027812.1 mouse_genomes_project 3 120777513 120777968 + MGP_BALBcJ_P0063507 protein_coding protein_coding MGP_BALBcJ_T0007633.1 MGP_BALBcJ_G0006241.1 mouse_genomes_project 3 105768581 105782638 - lincRNA lincRNA MGP_BALBcJ_T0017980.1 MGP_BALBcJ_G0015466.1 mouse_genomes_project 3 140732464 140751496 + Gm43646 processed_transcript processed_transcript MGP_BALBcJ_T0063775.1 MGP_BALBcJ_G0027862.1 mouse_genomes_project 3 130459225 130474946 + MGP_BALBcJ_P0063775 Gimd1 protein_coding protein_coding MGP_BALBcJ_T0063776.1 MGP_BALBcJ_G0027862.1 mouse_genomes_project 3 130463759 130474227 + MGP_BALBcJ_P0063776 Gimd1 protein_coding protein_coding MGP_BALBcJ_T0062953.1 MGP_BALBcJ_G0027692.1 mouse_genomes_project 3 103459697 103536918 - MGP_BALBcJ_P0062953 Rap1a protein_coding protein_coding MGP_BALBcJ_T0062954.1 MGP_BALBcJ_G0027692.1 mouse_genomes_project 3 103460744 103483504 - MGP_BALBcJ_P0062954 Rap1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062955.1 MGP_BALBcJ_G0027692.1 mouse_genomes_project 3 103461073 103536867 - MGP_BALBcJ_P0062955 Rap1a protein_coding protein_coding MGP_BALBcJ_T0062956.1 MGP_BALBcJ_G0027692.1 mouse_genomes_project 3 103470293 103536892 - MGP_BALBcJ_P0062956 Rap1a protein_coding protein_coding MGP_BALBcJ_T0098758.1 MGP_BALBcJ_G0036812.1 mouse_genomes_project 3 60077142 60077284 + Gm22433 scaRNA scaRNA MGP_BALBcJ_T0014095.1 MGP_BALBcJ_G0012192.1 mouse_genomes_project 3 68938021 68938985 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001253.1 MGP_BALBcJ_G0001176.1 mouse_genomes_project 3 86419357 86422097 + TEC TEC MGP_BALBcJ_T0101076.1 MGP_BALBcJ_G0039112.1 mouse_genomes_project 3 122355526 122355656 + Gm22900 snoRNA snoRNA MGP_BALBcJ_T0061297.1 MGP_BALBcJ_G0027310.1 mouse_genomes_project 3 81017434 81022930 - MGP_BALBcJ_P0061297 Tlr2 protein_coding protein_coding MGP_BALBcJ_T0062759.1 MGP_BALBcJ_G0027656.1 mouse_genomes_project 3 100468958 100473346 - Tshb protein_coding retained_intron MGP_BALBcJ_T0062760.1 MGP_BALBcJ_G0027656.1 mouse_genomes_project 3 100470885 100475840 - MGP_BALBcJ_P0062760 Tshb protein_coding protein_coding MGP_BALBcJ_T0062761.1 MGP_BALBcJ_G0027656.1 mouse_genomes_project 3 100470885 100475800 - MGP_BALBcJ_P0062761 Tshb protein_coding protein_coding MGP_BALBcJ_T0062762.1 MGP_BALBcJ_G0027656.1 mouse_genomes_project 3 100470894 100475844 - MGP_BALBcJ_P0062762 Tshb protein_coding protein_coding MGP_BALBcJ_T0062763.1 MGP_BALBcJ_G0027656.1 mouse_genomes_project 3 100470906 100475800 - MGP_BALBcJ_P0062763 Tshb protein_coding protein_coding MGP_BALBcJ_T0062764.1 MGP_BALBcJ_G0027656.1 mouse_genomes_project 3 100470933 100475609 - MGP_BALBcJ_P0062764 Tshb protein_coding protein_coding MGP_BALBcJ_T0007629.1 MGP_BALBcJ_G0006238.1 mouse_genomes_project 3 104766315 104781159 + AI504432 lincRNA lincRNA MGP_BALBcJ_T0062705.1 MGP_BALBcJ_G0027641.1 mouse_genomes_project 3 98504477 98579132 + MGP_BALBcJ_P0062705 Vtcn1 protein_coding protein_coding MGP_BALBcJ_T0007557.1 MGP_BALBcJ_G0006183.1 mouse_genomes_project 3 76710839 76714423 + 4930589L23Rik lincRNA lincRNA MGP_BALBcJ_T0099768.1 MGP_BALBcJ_G0037804.1 mouse_genomes_project 3 92375666 92375768 - Gm26279 snRNA snRNA MGP_BALBcJ_T0063957.1 MGP_BALBcJ_G0027896.1 mouse_genomes_project 3 136067018 136082664 + MGP_BALBcJ_P0063957 Adh7 protein_coding protein_coding MGP_BALBcJ_T0063958.1 MGP_BALBcJ_G0027896.1 mouse_genomes_project 3 136070722 136072339 + Adh7 protein_coding retained_intron MGP_BALBcJ_T0063959.1 MGP_BALBcJ_G0027896.1 mouse_genomes_project 3 136077300 136080691 + Adh7 protein_coding processed_transcript MGP_BALBcJ_T0060565.1 MGP_BALBcJ_G0027148.1 mouse_genomes_project 3 35779706 35906667 + MGP_BALBcJ_P0060565 Fat4 protein_coding unknown_likely_coding MGP_BALBcJ_T0060566.1 MGP_BALBcJ_G0027148.1 mouse_genomes_project 3 35784143 35846396 + Fat4 protein_coding retained_intron MGP_BALBcJ_T0014164.1 MGP_BALBcJ_G0012261.1 mouse_genomes_project 3 90831287 90832410 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011516.1 MGP_BALBcJ_G0009641.1 mouse_genomes_project 3 31462594 31462702 + Gm27611 misc_RNA misc_RNA MGP_BALBcJ_T0014226.1 MGP_BALBcJ_G0012323.1 mouse_genomes_project 3 106001254 106001783 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102481.1 MGP_BALBcJ_G0040297.1 mouse_genomes_project 3 91033540 91033729 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014350.1 MGP_BALBcJ_G0012447.1 mouse_genomes_project 3 146622558 146623074 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007563.1 MGP_BALBcJ_G0006189.1 mouse_genomes_project 3 79938799 79944760 + Gm30043 lincRNA lincRNA MGP_BALBcJ_T0060007.1 MGP_BALBcJ_G0027037.1 mouse_genomes_project 3 7068323 7128144 - MGP_BALBcJ_P0060007 Fabp12 protein_coding protein_coding MGP_BALBcJ_T0060008.1 MGP_BALBcJ_G0027037.1 mouse_genomes_project 3 7070032 7080274 - MGP_BALBcJ_P0060008 Fabp12 protein_coding protein_coding MGP_BALBcJ_T0060009.1 MGP_BALBcJ_G0027037.1 mouse_genomes_project 3 7070032 7080247 - MGP_BALBcJ_P0060009 Fabp12 protein_coding protein_coding MGP_BALBcJ_T0060010.1 MGP_BALBcJ_G0027037.1 mouse_genomes_project 3 7070065 7128135 - MGP_BALBcJ_P0060010 Fabp12 protein_coding protein_coding MGP_BALBcJ_T0007623.1 MGP_BALBcJ_G0006234.1 mouse_genomes_project 3 102378742 102381539 - Gm29561 lincRNA lincRNA MGP_BALBcJ_T0062383.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119044 93149123 + MGP_BALBcJ_P0062383 Golph3l protein_coding protein_coding MGP_BALBcJ_T0062384.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119044 93149118 + MGP_BALBcJ_P0062384 Golph3l protein_coding protein_coding MGP_BALBcJ_T0062385.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119044 93149123 + MGP_BALBcJ_P0062385 Golph3l protein_coding protein_coding MGP_BALBcJ_T0062386.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119079 93149117 + MGP_BALBcJ_P0062386 Golph3l protein_coding protein_coding MGP_BALBcJ_T0062387.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119079 93147440 + MGP_BALBcJ_P0062387 Golph3l protein_coding protein_coding MGP_BALBcJ_T0062388.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119084 93149116 + MGP_BALBcJ_P0062388 Golph3l protein_coding protein_coding MGP_BALBcJ_T0062389.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119091 93149117 + MGP_BALBcJ_P0062389 Golph3l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062390.1 MGP_BALBcJ_G0027559.1 mouse_genomes_project 3 93119100 93147371 + MGP_BALBcJ_P0062390 Golph3l protein_coding protein_coding MGP_BALBcJ_T0101020.1 MGP_BALBcJ_G0039056.1 mouse_genomes_project 3 14120289 14120428 - Gm24963 snoRNA snoRNA MGP_BALBcJ_T0014134.1 MGP_BALBcJ_G0012231.1 mouse_genomes_project 3 84070264 84071400 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098593.1 MGP_BALBcJ_G0036647.1 mouse_genomes_project 3 125646525 125646611 + Gm23279 rRNA rRNA MGP_BALBcJ_T0099771.1 MGP_BALBcJ_G0037807.1 mouse_genomes_project 3 93880024 93880190 + Gm24830 snRNA snRNA MGP_BALBcJ_T0014133.1 MGP_BALBcJ_G0012230.1 mouse_genomes_project 3 83875543 83875679 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004380.1 MGP_BALBcJ_G0003821.1 mouse_genomes_project 3 142702306 142702912 + Gm34866 antisense antisense MGP_BALBcJ_T0017949.1 MGP_BALBcJ_G0015457.1 mouse_genomes_project 3 106140587 106145095 - Gm12522 processed_transcript processed_transcript MGP_BALBcJ_T0007470.1 MGP_BALBcJ_G0006118.1 mouse_genomes_project 3 31224694 31226362 + Gm43208 lincRNA lincRNA MGP_BALBcJ_T0001344.1 MGP_BALBcJ_G0001266.1 mouse_genomes_project 3 128512967 128515804 + TEC TEC MGP_BALBcJ_T0001282.1 MGP_BALBcJ_G0001205.1 mouse_genomes_project 3 106295883 106298056 - TEC TEC MGP_BALBcJ_T0010544.1 MGP_BALBcJ_G0008669.1 mouse_genomes_project 3 136377699 136377764 + Mir1956 miRNA miRNA MGP_BALBcJ_T0004343.1 MGP_BALBcJ_G0003794.1 mouse_genomes_project 3 120468213 120477894 + Gm43569 antisense antisense MGP_BALBcJ_T0001199.1 MGP_BALBcJ_G0001122.1 mouse_genomes_project 3 48934532 48941492 - TEC TEC MGP_BALBcJ_T0014010.1 MGP_BALBcJ_G0012107.1 mouse_genomes_project 3 46586853 46587273 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060923.1 MGP_BALBcJ_G0027219.1 mouse_genomes_project 3 56084359 56095670 - MGP_BALBcJ_P0060923 P2ry12 protein_coding protein_coding MGP_BALBcJ_T0060924.1 MGP_BALBcJ_G0027219.1 mouse_genomes_project 3 56084446 56131167 - MGP_BALBcJ_P0060924 P2ry12 protein_coding protein_coding MGP_BALBcJ_T0060925.1 MGP_BALBcJ_G0027219.1 mouse_genomes_project 3 56084447 56088347 - MGP_BALBcJ_P0060925 P2ry12 protein_coding protein_coding MGP_BALBcJ_T0060926.1 MGP_BALBcJ_G0027219.1 mouse_genomes_project 3 56084448 56131207 - MGP_BALBcJ_P0060926 P2ry12 protein_coding protein_coding MGP_BALBcJ_T0060927.1 MGP_BALBcJ_G0027219.1 mouse_genomes_project 3 56085992 56088288 - MGP_BALBcJ_P0060927 P2ry12 protein_coding protein_coding MGP_BALBcJ_T0013880.1 MGP_BALBcJ_G0011977.1 mouse_genomes_project 3 3580121 3580467 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007736.1 MGP_BALBcJ_G0006327.1 mouse_genomes_project 3 147188328 147192412 - Gm10287 lincRNA lincRNA MGP_BALBcJ_T0007737.1 MGP_BALBcJ_G0006327.1 mouse_genomes_project 3 147188334 147192412 - Gm10287 lincRNA lincRNA MGP_BALBcJ_T0062770.1 MGP_BALBcJ_G0027658.1 mouse_genomes_project 3 100645100 100669853 - MGP_BALBcJ_P0062770 Nr1h5 protein_coding protein_coding MGP_BALBcJ_T0062771.1 MGP_BALBcJ_G0027658.1 mouse_genomes_project 3 100646309 100664202 - MGP_BALBcJ_P0062771 Nr1h5 protein_coding protein_coding MGP_BALBcJ_T0062772.1 MGP_BALBcJ_G0027658.1 mouse_genomes_project 3 100646309 100664202 - MGP_BALBcJ_P0062772 Nr1h5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062773.1 MGP_BALBcJ_G0027658.1 mouse_genomes_project 3 100646309 100664202 - MGP_BALBcJ_P0062773 Nr1h5 protein_coding protein_coding MGP_BALBcJ_T0062774.1 MGP_BALBcJ_G0027658.1 mouse_genomes_project 3 100646309 100664202 - MGP_BALBcJ_P0062774 Nr1h5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063316.1 MGP_BALBcJ_G0027778.1 mouse_genomes_project 3 114114851 114118705 - MGP_BALBcJ_P0063316 Gpr88 protein_coding protein_coding MGP_BALBcJ_T0063317.1 MGP_BALBcJ_G0027778.1 mouse_genomes_project 3 114117760 114118291 - MGP_BALBcJ_P0063317 Gpr88 protein_coding protein_coding MGP_BALBcJ_T0063318.1 MGP_BALBcJ_G0027778.1 mouse_genomes_project 3 114117873 114118665 - Gpr88 protein_coding processed_transcript MGP_BALBcJ_T0007658.1 MGP_BALBcJ_G0006260.1 mouse_genomes_project 3 120191164 120201282 + Gm40190 lincRNA lincRNA MGP_BALBcJ_T0013943.1 MGP_BALBcJ_G0012040.1 mouse_genomes_project 3 23830156 23830267 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063510.1 MGP_BALBcJ_G0027815.1 mouse_genomes_project 3 120840849 120843166 + MGP_BALBcJ_P0063510 1810037I17Rik protein_coding protein_coding MGP_BALBcJ_T0062349.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92834658 92841708 + MGP_BALBcJ_P0062349 Cers2 protein_coding protein_coding MGP_BALBcJ_T0062350.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92834951 92843427 + MGP_BALBcJ_P0062350 Cers2 protein_coding protein_coding MGP_BALBcJ_T0062351.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92835114 92840601 + Cers2 protein_coding retained_intron MGP_BALBcJ_T0062352.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92835134 92841151 + Cers2 protein_coding retained_intron MGP_BALBcJ_T0062353.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92837177 92840378 + Cers2 protein_coding retained_intron MGP_BALBcJ_T0062354.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92837848 92840870 + MGP_BALBcJ_P0062354 Cers2 protein_coding protein_coding MGP_BALBcJ_T0062355.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92838619 92841783 + MGP_BALBcJ_P0062355 Cers2 protein_coding protein_coding MGP_BALBcJ_T0062356.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92839960 92842500 + Cers2 protein_coding retained_intron MGP_BALBcJ_T0062357.1 MGP_BALBcJ_G0027553.1 mouse_genomes_project 3 92840767 92841785 + Cers2 protein_coding retained_intron MGP_BALBcJ_T0014290.1 MGP_BALBcJ_G0012387.1 mouse_genomes_project 3 127999891 128000242 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007721.1 MGP_BALBcJ_G0006314.1 mouse_genomes_project 3 141636886 141638796 + Gm42706 lincRNA lincRNA MGP_BALBcJ_T0102464.1 MGP_BALBcJ_G0040280.1 mouse_genomes_project 3 61646023 61661947 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001123.1 MGP_BALBcJ_G0001048.1 mouse_genomes_project 3 27090276 27092397 - TEC TEC MGP_BALBcJ_T0013969.1 MGP_BALBcJ_G0012066.1 mouse_genomes_project 3 33978646 33979343 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099721.1 MGP_BALBcJ_G0037757.1 mouse_genomes_project 3 14681128 14681255 - Gm23441 snRNA snRNA MGP_BALBcJ_T0007694.1 MGP_BALBcJ_G0006291.1 mouse_genomes_project 3 135180332 135194686 + Gm567 lincRNA lincRNA MGP_BALBcJ_T0001372.1 MGP_BALBcJ_G0001294.1 mouse_genomes_project 3 149128674 149134653 - TEC TEC MGP_BALBcJ_T0099754.1 MGP_BALBcJ_G0037790.1 mouse_genomes_project 3 83391936 83392047 + Gm23025 snRNA snRNA MGP_BALBcJ_T0014355.1 MGP_BALBcJ_G0012452.1 mouse_genomes_project 3 150182851 150183521 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060530.1 MGP_BALBcJ_G0027141.1 mouse_genomes_project 3 34210663 34219560 + MGP_BALBcJ_P0060530 Bbs12 protein_coding protein_coding MGP_BALBcJ_T0060531.1 MGP_BALBcJ_G0027141.1 mouse_genomes_project 3 34210665 34219563 + MGP_BALBcJ_P0060531 Bbs12 protein_coding protein_coding MGP_BALBcJ_T0001343.1 MGP_BALBcJ_G0001265.1 mouse_genomes_project 3 128482801 128484700 + TEC TEC MGP_BALBcJ_T0063838.1 MGP_BALBcJ_G0027874.1 mouse_genomes_project 3 133160172 133183320 + MGP_BALBcJ_P0063838 Bdh2 protein_coding protein_coding MGP_BALBcJ_T0063839.1 MGP_BALBcJ_G0027874.1 mouse_genomes_project 3 133160212 133183320 + MGP_BALBcJ_P0063839 Bdh2 protein_coding protein_coding MGP_BALBcJ_T0063840.1 MGP_BALBcJ_G0027874.1 mouse_genomes_project 3 133160234 133163368 + Bdh2 protein_coding retained_intron MGP_BALBcJ_T0063841.1 MGP_BALBcJ_G0027874.1 mouse_genomes_project 3 133167609 133183317 + Bdh2 protein_coding processed_transcript MGP_BALBcJ_T0099800.1 MGP_BALBcJ_G0037836.1 mouse_genomes_project 3 144060638 144060791 - Gm25627 snRNA snRNA MGP_BALBcJ_T0014043.1 MGP_BALBcJ_G0012140.1 mouse_genomes_project 3 55536691 55539052 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060560.1 MGP_BALBcJ_G0027146.1 mouse_genomes_project 3 34619225 34625517 - protein_coding processed_transcript MGP_BALBcJ_T0013945.1 MGP_BALBcJ_G0012042.1 mouse_genomes_project 3 24088335 24088723 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014352.1 MGP_BALBcJ_G0012449.1 mouse_genomes_project 3 149981584 149982062 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064491.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157865670 157962684 + MGP_BALBcJ_P0064491 Wls protein_coding protein_coding MGP_BALBcJ_T0064492.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157865735 157965329 + MGP_BALBcJ_P0064492 Wls protein_coding protein_coding MGP_BALBcJ_T0064493.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157865737 157939127 + Wls protein_coding retained_intron MGP_BALBcJ_T0064494.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157865737 157940102 + Wls protein_coding retained_intron MGP_BALBcJ_T0064495.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157865737 157961564 + MGP_BALBcJ_P0064495 Wls protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064496.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157865908 157899507 + Wls protein_coding retained_intron MGP_BALBcJ_T0064497.1 MGP_BALBcJ_G0027990.1 mouse_genomes_project 3 157874437 157877533 + Wls protein_coding retained_intron MGP_BALBcJ_T0059954.1 MGP_BALBcJ_G0027018.1 mouse_genomes_project 3 2054513 2261633 + MGP_BALBcJ_P0059954 Zfhx4 protein_coding protein_coding MGP_BALBcJ_T0059955.1 MGP_BALBcJ_G0027018.1 mouse_genomes_project 3 2054533 2177174 + Zfhx4 protein_coding retained_intron MGP_BALBcJ_T0059956.1 MGP_BALBcJ_G0027018.1 mouse_genomes_project 3 2054541 2264322 + MGP_BALBcJ_P0059956 Zfhx4 protein_coding protein_coding MGP_BALBcJ_T0059957.1 MGP_BALBcJ_G0027018.1 mouse_genomes_project 3 2058771 2079288 + MGP_BALBcJ_P0059957 Zfhx4 protein_coding protein_coding MGP_BALBcJ_T0059958.1 MGP_BALBcJ_G0027018.1 mouse_genomes_project 3 2078941 2264324 + MGP_BALBcJ_P0059958 Zfhx4 protein_coding protein_coding MGP_BALBcJ_T0063100.1 MGP_BALBcJ_G0027731.1 mouse_genomes_project 3 105684526 105689320 - MGP_BALBcJ_P0063100 Gstm6 protein_coding protein_coding MGP_BALBcJ_T0063101.1 MGP_BALBcJ_G0027731.1 mouse_genomes_project 3 105684534 105689421 - MGP_BALBcJ_P0063101 Gstm6 protein_coding protein_coding MGP_BALBcJ_T0063102.1 MGP_BALBcJ_G0027731.1 mouse_genomes_project 3 105684792 105689070 - MGP_BALBcJ_P0063102 Gstm6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063103.1 MGP_BALBcJ_G0027731.1 mouse_genomes_project 3 105687504 105689402 - Gstm6 protein_coding processed_transcript MGP_BALBcJ_T0062796.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100759637 100769537 + MGP_BALBcJ_P0062796 Nras protein_coding protein_coding MGP_BALBcJ_T0062797.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100759700 100763879 + MGP_BALBcJ_P0062797 Nras protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062798.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100759719 100765732 + MGP_BALBcJ_P0062798 Nras protein_coding protein_coding MGP_BALBcJ_T0062799.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100759943 100761663 + MGP_BALBcJ_P0062799 Nras protein_coding protein_coding MGP_BALBcJ_T0062800.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100759945 100764762 + MGP_BALBcJ_P0062800 Nras protein_coding protein_coding MGP_BALBcJ_T0062801.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100760092 100763878 + MGP_BALBcJ_P0062801 Nras protein_coding protein_coding MGP_BALBcJ_T0062802.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100760252 100767805 + MGP_BALBcJ_P0062802 Nras protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062803.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100760252 100769529 + MGP_BALBcJ_P0062803 Nras protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062804.1 MGP_BALBcJ_G0027661.1 mouse_genomes_project 3 100760337 100764312 + Nras protein_coding retained_intron MGP_BALBcJ_T0014354.1 MGP_BALBcJ_G0012451.1 mouse_genomes_project 3 150099314 150099870 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011522.1 MGP_BALBcJ_G0009647.1 mouse_genomes_project 3 79976603 79976845 - Gm22038 misc_RNA misc_RNA MGP_BALBcJ_T0014169.1 MGP_BALBcJ_G0012266.1 mouse_genomes_project 3 92290628 92291457 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014033.1 MGP_BALBcJ_G0012130.1 mouse_genomes_project 3 54238901 54239948 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014023.1 MGP_BALBcJ_G0012120.1 mouse_genomes_project 3 50243004 50243742 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004388.1 MGP_BALBcJ_G0003827.1 mouse_genomes_project 3 150932491 150933652 + Gm16213 antisense antisense MGP_BALBcJ_T0060233.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629719 25633449 + MGP_BALBcJ_P0060233 Rpl22l1 protein_coding protein_coding MGP_BALBcJ_T0060234.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629752 25633458 + MGP_BALBcJ_P0060234 Rpl22l1 protein_coding protein_coding MGP_BALBcJ_T0060235.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629791 25633449 + Rpl22l1 protein_coding retained_intron MGP_BALBcJ_T0060236.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629793 25633456 + MGP_BALBcJ_P0060236 Rpl22l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060237.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629848 25632734 + Rpl22l1 protein_coding processed_transcript MGP_BALBcJ_T0060238.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629880 25633328 + Rpl22l1 protein_coding processed_transcript MGP_BALBcJ_T0060239.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25629946 25633449 + Rpl22l1 protein_coding processed_transcript MGP_BALBcJ_T0060240.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25630741 25633449 + Rpl22l1 protein_coding retained_intron MGP_BALBcJ_T0060241.1 MGP_BALBcJ_G0027090.1 mouse_genomes_project 3 25630782 25633450 + Rpl22l1 protein_coding retained_intron MGP_BALBcJ_T0098917.1 MGP_BALBcJ_G0036964.1 mouse_genomes_project 3 101898304 101900734 - Gm43260 sense_intronic sense_intronic MGP_BALBcJ_T0061483.1 MGP_BALBcJ_G0027351.1 mouse_genomes_project 3 85225134 85238115 - MGP_BALBcJ_P0061483 Bcan protein_coding protein_coding MGP_BALBcJ_T0061484.1 MGP_BALBcJ_G0027351.1 mouse_genomes_project 3 85230109 85232046 - Bcan protein_coding retained_intron MGP_BALBcJ_T0061485.1 MGP_BALBcJ_G0027351.1 mouse_genomes_project 3 85230109 85235446 - Bcan protein_coding retained_intron MGP_BALBcJ_T0061486.1 MGP_BALBcJ_G0027351.1 mouse_genomes_project 3 85231189 85233956 - Bcan protein_coding retained_intron MGP_BALBcJ_T0061487.1 MGP_BALBcJ_G0027351.1 mouse_genomes_project 3 85234035 85234856 - Bcan protein_coding retained_intron MGP_BALBcJ_T0061488.1 MGP_BALBcJ_G0027351.1 mouse_genomes_project 3 85234723 85237519 - MGP_BALBcJ_P0061488 Bcan protein_coding protein_coding MGP_BALBcJ_T0011519.1 MGP_BALBcJ_G0009644.1 mouse_genomes_project 3 69399561 69399652 + Gm27465 misc_RNA misc_RNA MGP_BALBcJ_T0063714.1 MGP_BALBcJ_G0027849.1 mouse_genomes_project 3 127828961 127885681 - MGP_BALBcJ_P0063714 Ccdc109b protein_coding protein_coding MGP_BALBcJ_T0063715.1 MGP_BALBcJ_G0027849.1 mouse_genomes_project 3 127828976 127885523 - MGP_BALBcJ_P0063715 Ccdc109b protein_coding protein_coding MGP_BALBcJ_T0063716.1 MGP_BALBcJ_G0027849.1 mouse_genomes_project 3 127831081 127885464 - MGP_BALBcJ_P0063716 Ccdc109b protein_coding protein_coding MGP_BALBcJ_T0063717.1 MGP_BALBcJ_G0027849.1 mouse_genomes_project 3 127840757 127885599 - MGP_BALBcJ_P0063717 Ccdc109b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098759.1 MGP_BALBcJ_G0036813.1 mouse_genomes_project 3 66157430 66157779 - Gm22009 scaRNA scaRNA MGP_BALBcJ_T0014129.1 MGP_BALBcJ_G0012226.1 mouse_genomes_project 3 83117407 83117882 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102502.1 MGP_BALBcJ_G0040318.1 mouse_genomes_project 3 154861941 154862416 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061450.1 MGP_BALBcJ_G0027343.1 mouse_genomes_project 3 85084234 85090259 + MGP_BALBcJ_P0061450 Sh2d2a protein_coding protein_coding MGP_BALBcJ_T0061451.1 MGP_BALBcJ_G0027343.1 mouse_genomes_project 3 85084484 85093205 + MGP_BALBcJ_P0061451 Sh2d2a protein_coding protein_coding MGP_BALBcJ_T0061452.1 MGP_BALBcJ_G0027343.1 mouse_genomes_project 3 85084490 85087424 + Sh2d2a protein_coding retained_intron MGP_BALBcJ_T0001221.1 MGP_BALBcJ_G0001144.1 mouse_genomes_project 3 55570308 55571418 + TEC TEC MGP_BALBcJ_T0014062.1 MGP_BALBcJ_G0012159.1 mouse_genomes_project 3 60842857 60843147 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001317.1 MGP_BALBcJ_G0001240.1 mouse_genomes_project 3 124529694 124535334 + TEC TEC MGP_BALBcJ_T0062289.1 MGP_BALBcJ_G0027541.1 mouse_genomes_project 3 92642205 92649994 + MGP_BALBcJ_P0062289 protein_coding protein_coding MGP_BALBcJ_T0004333.1 MGP_BALBcJ_G0003786.1 mouse_genomes_project 3 108015812 108019723 + C130013H08Rik antisense antisense MGP_BALBcJ_T0099782.1 MGP_BALBcJ_G0037818.1 mouse_genomes_project 3 106261479 106261602 + Gm23336 snRNA snRNA MGP_BALBcJ_T0007689.1 MGP_BALBcJ_G0006286.1 mouse_genomes_project 3 132269022 132288449 - 4930539C22Rik lincRNA lincRNA MGP_BALBcJ_T0010545.1 MGP_BALBcJ_G0008670.1 mouse_genomes_project 3 137861465 137861587 + Mir7j miRNA miRNA MGP_BALBcJ_T0064335.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150730126 150804728 + MGP_BALBcJ_P0064335 Pigk protein_coding protein_coding MGP_BALBcJ_T0064336.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150730132 150757264 + Pigk protein_coding retained_intron MGP_BALBcJ_T0064337.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150730139 150852313 + MGP_BALBcJ_P0064337 Pigk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064338.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150730139 150801600 + MGP_BALBcJ_P0064338 Pigk protein_coding protein_coding MGP_BALBcJ_T0064339.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150730146 150992580 + MGP_BALBcJ_P0064339 Pigk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064340.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150730149 150801331 + MGP_BALBcJ_P0064340 Pigk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064341.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150754146 150756300 + Pigk protein_coding processed_transcript MGP_BALBcJ_T0064342.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150754365 150801526 + MGP_BALBcJ_P0064342 Pigk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064343.1 MGP_BALBcJ_G0027965.1 mouse_genomes_project 3 150779476 150782657 + Pigk protein_coding processed_transcript MGP_BALBcJ_T0098926.1 MGP_BALBcJ_G0036973.1 mouse_genomes_project 3 102687344 102688276 - Gm43846 sense_intronic sense_intronic MGP_BALBcJ_T0101028.1 MGP_BALBcJ_G0039064.1 mouse_genomes_project 3 36695247 36695332 - Gm23831 snoRNA snoRNA MGP_BALBcJ_T0004194.1 MGP_BALBcJ_G0003696.1 mouse_genomes_project 3 27618590 27619585 - 4933429H19Rik antisense antisense MGP_BALBcJ_T0004195.1 MGP_BALBcJ_G0003696.1 mouse_genomes_project 3 27619158 27619581 - 4933429H19Rik antisense antisense MGP_BALBcJ_T0061446.1 MGP_BALBcJ_G0027342.1 mouse_genomes_project 3 85033939 85053071 + MGP_BALBcJ_P0061446 Insrr protein_coding protein_coding MGP_BALBcJ_T0061447.1 MGP_BALBcJ_G0027342.1 mouse_genomes_project 3 85033953 85042094 + Insrr protein_coding retained_intron MGP_BALBcJ_T0061448.1 MGP_BALBcJ_G0027342.1 mouse_genomes_project 3 85034082 85053022 + MGP_BALBcJ_P0061448 Insrr protein_coding protein_coding MGP_BALBcJ_T0061449.1 MGP_BALBcJ_G0027342.1 mouse_genomes_project 3 85038931 85039797 + Insrr protein_coding processed_transcript MGP_BALBcJ_T0014244.1 MGP_BALBcJ_G0012341.1 mouse_genomes_project 3 110898924 110899755 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060760.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51258265 51288177 + MGP_BALBcJ_P0060760 Postn protein_coding protein_coding MGP_BALBcJ_T0060761.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51258265 51288180 + MGP_BALBcJ_P0060761 Postn protein_coding protein_coding MGP_BALBcJ_T0060762.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51258281 51288177 + MGP_BALBcJ_P0060762 Postn protein_coding protein_coding MGP_BALBcJ_T0060763.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51258299 51287595 + MGP_BALBcJ_P0060763 Postn protein_coding protein_coding MGP_BALBcJ_T0060764.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51274709 51287790 + MGP_BALBcJ_P0060764 Postn protein_coding protein_coding MGP_BALBcJ_T0060765.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51275629 51281855 + Postn protein_coding retained_intron MGP_BALBcJ_T0060766.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51280251 51287630 + Postn protein_coding retained_intron MGP_BALBcJ_T0060767.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51280253 51287725 + Postn protein_coding retained_intron MGP_BALBcJ_T0060768.1 MGP_BALBcJ_G0027184.1 mouse_genomes_project 3 51286031 51287536 + Postn protein_coding retained_intron MGP_BALBcJ_T0063386.1 MGP_BALBcJ_G0027791.1 mouse_genomes_project 3 114855892 114872053 + MGP_BALBcJ_P0063386 4930455H04Rik protein_coding protein_coding MGP_BALBcJ_T0001269.1 MGP_BALBcJ_G0001192.1 mouse_genomes_project 3 94869687 94870876 - TEC TEC MGP_BALBcJ_T0062572.1 MGP_BALBcJ_G0027604.1 mouse_genomes_project 3 94308452 94377142 + MGP_BALBcJ_P0062572 Rnf115 protein_coding protein_coding MGP_BALBcJ_T0062573.1 MGP_BALBcJ_G0027604.1 mouse_genomes_project 3 94308460 94377628 + MGP_BALBcJ_P0062573 Rnf115 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062574.1 MGP_BALBcJ_G0027604.1 mouse_genomes_project 3 94308627 94369718 + Rnf115 protein_coding processed_transcript MGP_BALBcJ_T0014356.1 MGP_BALBcJ_G0012453.1 mouse_genomes_project 3 150796907 150797808 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010478.1 MGP_BALBcJ_G0008603.1 mouse_genomes_project 3 374406 374498 + Gm23237 miRNA miRNA MGP_BALBcJ_T0060011.1 MGP_BALBcJ_G0027038.1 mouse_genomes_project 3 7139023 7158570 - MGP_BALBcJ_P0060011 Impa1 protein_coding protein_coding MGP_BALBcJ_T0060012.1 MGP_BALBcJ_G0027038.1 mouse_genomes_project 3 7141015 7158568 - MGP_BALBcJ_P0060012 Impa1 protein_coding protein_coding MGP_BALBcJ_T0060013.1 MGP_BALBcJ_G0027038.1 mouse_genomes_project 3 7141021 7158570 - MGP_BALBcJ_P0060013 Impa1 protein_coding protein_coding MGP_BALBcJ_T0060014.1 MGP_BALBcJ_G0027038.1 mouse_genomes_project 3 7142185 7143720 - Impa1 protein_coding retained_intron MGP_BALBcJ_T0060016.1 MGP_BALBcJ_G0027038.1 mouse_genomes_project 3 7153312 7158263 - MGP_BALBcJ_P0060016 Impa1 protein_coding protein_coding MGP_BALBcJ_T0010498.1 MGP_BALBcJ_G0008623.1 mouse_genomes_project 3 62726213 62726352 + Mir8120 miRNA miRNA MGP_BALBcJ_T0007545.1 MGP_BALBcJ_G0006175.1 mouse_genomes_project 3 70184895 70314387 + lincRNA lincRNA MGP_BALBcJ_T0007546.1 MGP_BALBcJ_G0006175.1 mouse_genomes_project 3 70184930 70720139 + lincRNA lincRNA MGP_BALBcJ_T0061516.1 MGP_BALBcJ_G0027359.1 mouse_genomes_project 3 85484204 85529920 - MGP_BALBcJ_P0061516 Gm38392 protein_coding protein_coding MGP_BALBcJ_T0061517.1 MGP_BALBcJ_G0027359.1 mouse_genomes_project 3 85486019 85529920 - MGP_BALBcJ_P0061517 Gm38392 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001169.1 MGP_BALBcJ_G0001094.1 mouse_genomes_project 3 45023326 45023435 + TEC TEC MGP_BALBcJ_T0007602.1 MGP_BALBcJ_G0006215.1 mouse_genomes_project 3 93929117 93931022 - lincRNA lincRNA MGP_BALBcJ_T0017925.1 MGP_BALBcJ_G0015447.1 mouse_genomes_project 3 85441496 85444355 + AW047730 processed_transcript processed_transcript MGP_BALBcJ_T0017926.1 MGP_BALBcJ_G0015447.1 mouse_genomes_project 3 85441508 85444355 + AW047730 processed_transcript processed_transcript MGP_BALBcJ_T0004261.1 MGP_BALBcJ_G0003745.1 mouse_genomes_project 3 86527996 86531473 + Gm15998 antisense antisense MGP_BALBcJ_T0060673.1 MGP_BALBcJ_G0027165.1 mouse_genomes_project 3 48092836 48115371 + MGP_BALBcJ_P0060673 Noct protein_coding protein_coding MGP_BALBcJ_T0060674.1 MGP_BALBcJ_G0027165.1 mouse_genomes_project 3 48092859 48115358 + MGP_BALBcJ_P0060674 Noct protein_coding protein_coding MGP_BALBcJ_T0098886.1 MGP_BALBcJ_G0036933.1 mouse_genomes_project 3 95899147 95902194 + Gm43189 sense_intronic sense_intronic MGP_BALBcJ_T0062673.1 MGP_BALBcJ_G0027634.1 mouse_genomes_project 3 96818833 96895242 + MGP_BALBcJ_P0062673 Wars2 protein_coding protein_coding MGP_BALBcJ_T0062674.1 MGP_BALBcJ_G0027634.1 mouse_genomes_project 3 96818875 96897538 + MGP_BALBcJ_P0062674 Wars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062675.1 MGP_BALBcJ_G0027634.1 mouse_genomes_project 3 96818896 96917670 + MGP_BALBcJ_P0062675 Wars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062676.1 MGP_BALBcJ_G0027634.1 mouse_genomes_project 3 96818899 96894936 + MGP_BALBcJ_P0062676 Wars2 protein_coding protein_coding MGP_BALBcJ_T0062677.1 MGP_BALBcJ_G0027634.1 mouse_genomes_project 3 96818968 96883700 + Wars2 protein_coding retained_intron MGP_BALBcJ_T0013981.1 MGP_BALBcJ_G0012078.1 mouse_genomes_project 3 35454436 35454968 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099741.1 MGP_BALBcJ_G0037777.1 mouse_genomes_project 3 60428548 60428654 + Gm24946 snRNA snRNA MGP_BALBcJ_T0061260.1 MGP_BALBcJ_G0027298.1 mouse_genomes_project 3 79220284 79263316 - MGP_BALBcJ_P0061260 Gucy1b3 protein_coding protein_coding MGP_BALBcJ_T0061261.1 MGP_BALBcJ_G0027298.1 mouse_genomes_project 3 79222598 79223609 - Gucy1b3 protein_coding retained_intron MGP_BALBcJ_T0061262.1 MGP_BALBcJ_G0027298.1 mouse_genomes_project 3 79239844 79263415 - Gucy1b3 protein_coding processed_transcript MGP_BALBcJ_T0017937.1 MGP_BALBcJ_G0015452.1 mouse_genomes_project 3 98094809 98097270 + 4930406D18Rik processed_transcript retained_intron MGP_BALBcJ_T0017938.1 MGP_BALBcJ_G0015452.1 mouse_genomes_project 3 98094843 98106160 + 4930406D18Rik processed_transcript lincRNA MGP_BALBcJ_T0061085.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65127676 65712764 + MGP_BALBcJ_P0061085 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061086.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65127676 65712764 + MGP_BALBcJ_P0061086 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061087.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65549595 65712781 + MGP_BALBcJ_P0061087 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061088.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65574925 65704974 + MGP_BALBcJ_P0061088 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061089.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65575642 65712763 + MGP_BALBcJ_P0061089 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061090.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65657499 65712764 + MGP_BALBcJ_P0061090 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061091.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65670073 65712764 + MGP_BALBcJ_P0061091 Schip1 protein_coding protein_coding MGP_BALBcJ_T0061092.1 MGP_BALBcJ_G0027259.1 mouse_genomes_project 3 65682073 65684064 + Schip1 protein_coding retained_intron MGP_BALBcJ_T0063065.1 MGP_BALBcJ_G0027724.1 mouse_genomes_project 3 105349157 105350707 - Strip1 protein_coding retained_intron MGP_BALBcJ_T0063066.1 MGP_BALBcJ_G0027724.1 mouse_genomes_project 3 105349157 105368314 - MGP_BALBcJ_P0063066 Strip1 protein_coding protein_coding MGP_BALBcJ_T0063067.1 MGP_BALBcJ_G0027724.1 mouse_genomes_project 3 105349160 105363466 - Strip1 protein_coding processed_transcript MGP_BALBcJ_T0063068.1 MGP_BALBcJ_G0027724.1 mouse_genomes_project 3 105353519 105356701 - Strip1 protein_coding processed_transcript MGP_BALBcJ_T0063069.1 MGP_BALBcJ_G0027724.1 mouse_genomes_project 3 105357077 105368314 - Strip1 protein_coding retained_intron MGP_BALBcJ_T0063904.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134553677 134687236 + Ppp3ca protein_coding processed_transcript MGP_BALBcJ_T0063905.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134553677 134830554 + MGP_BALBcJ_P0063905 Ppp3ca protein_coding protein_coding MGP_BALBcJ_T0063906.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134554323 134828636 + MGP_BALBcJ_P0063906 Ppp3ca protein_coding protein_coding MGP_BALBcJ_T0063907.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134724308 134771013 + Ppp3ca protein_coding processed_transcript MGP_BALBcJ_T0063908.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134769946 134772593 + Ppp3ca protein_coding retained_intron MGP_BALBcJ_T0063909.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134777466 134779503 + Ppp3ca protein_coding retained_intron MGP_BALBcJ_T0063910.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134791839 134821418 + Ppp3ca protein_coding processed_transcript MGP_BALBcJ_T0063911.1 MGP_BALBcJ_G0027883.1 mouse_genomes_project 3 134792655 134795156 + Ppp3ca protein_coding retained_intron MGP_BALBcJ_T0062546.1 MGP_BALBcJ_G0027599.1 mouse_genomes_project 3 94222580 94242405 + MGP_BALBcJ_P0062546 Itga10 protein_coding protein_coding MGP_BALBcJ_T0062547.1 MGP_BALBcJ_G0027599.1 mouse_genomes_project 3 94222580 94242399 + MGP_BALBcJ_P0062547 Itga10 protein_coding protein_coding MGP_BALBcJ_T0062548.1 MGP_BALBcJ_G0027599.1 mouse_genomes_project 3 94234341 94239981 + Itga10 protein_coding retained_intron MGP_BALBcJ_T0001397.1 MGP_BALBcJ_G0001319.1 mouse_genomes_project 3 156255366 156257094 + TEC TEC MGP_BALBcJ_T0061560.1 MGP_BALBcJ_G0027367.1 mouse_genomes_project 3 85628309 85629074 - MGP_BALBcJ_P0061560 protein_coding protein_coding MGP_BALBcJ_T0013985.1 MGP_BALBcJ_G0012082.1 mouse_genomes_project 3 37428626 37428926 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060153.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18910896 19053011 + MGP_BALBcJ_P0060153 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060154.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18910971 19049168 + MGP_BALBcJ_P0060154 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060155.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18911000 19024921 + Tbl1xr1 protein_coding processed_transcript MGP_BALBcJ_T0060156.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18911076 19027333 + MGP_BALBcJ_P0060156 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060157.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18911125 19026208 + Tbl1xr1 protein_coding processed_transcript MGP_BALBcJ_T0060158.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18911180 19024889 + MGP_BALBcJ_P0060158 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060159.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18911528 19051710 + MGP_BALBcJ_P0060159 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060160.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18949983 19048385 + MGP_BALBcJ_P0060160 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060161.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18974822 19026201 + MGP_BALBcJ_P0060161 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060162.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 18984490 19049492 + MGP_BALBcJ_P0060162 Tbl1xr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060163.1 MGP_BALBcJ_G0027076.1 mouse_genomes_project 3 19039608 19046996 + MGP_BALBcJ_P0060163 Tbl1xr1 protein_coding protein_coding MGP_BALBcJ_T0060273.1 MGP_BALBcJ_G0027095.1 mouse_genomes_project 3 27448070 27471621 - MGP_BALBcJ_P0060273 Lrrc34 protein_coding protein_coding MGP_BALBcJ_T0007686.1 MGP_BALBcJ_G0006284.1 mouse_genomes_project 3 132018436 132049901 + Gm43192 lincRNA lincRNA MGP_BALBcJ_T0062706.1 MGP_BALBcJ_G0027642.1 mouse_genomes_project 3 98604260 98613704 + MGP_BALBcJ_P0062706 Trim45 protein_coding protein_coding MGP_BALBcJ_T0062707.1 MGP_BALBcJ_G0027642.1 mouse_genomes_project 3 98604533 98616013 + MGP_BALBcJ_P0062707 Trim45 protein_coding protein_coding MGP_BALBcJ_T0062708.1 MGP_BALBcJ_G0027642.1 mouse_genomes_project 3 98604551 98618921 + MGP_BALBcJ_P0062708 Trim45 protein_coding protein_coding MGP_BALBcJ_T0062709.1 MGP_BALBcJ_G0027642.1 mouse_genomes_project 3 98604978 98614059 + MGP_BALBcJ_P0062709 Trim45 protein_coding protein_coding MGP_BALBcJ_T0098921.1 MGP_BALBcJ_G0036968.1 mouse_genomes_project 3 102228388 102229595 - 4930509H03Rik sense_intronic sense_intronic MGP_BALBcJ_T0014178.1 MGP_BALBcJ_G0012275.1 mouse_genomes_project 3 93988006 93989397 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063508.1 MGP_BALBcJ_G0027813.1 mouse_genomes_project 3 120811481 120815915 + MGP_BALBcJ_P0063508 Fabp2 protein_coding protein_coding MGP_BALBcJ_T0060589.1 MGP_BALBcJ_G0027153.1 mouse_genomes_project 3 37590222 37663574 - MGP_BALBcJ_P0060589 Mfsd8 protein_coding protein_coding MGP_BALBcJ_T0060590.1 MGP_BALBcJ_G0027153.1 mouse_genomes_project 3 37591627 37663491 - MGP_BALBcJ_P0060590 Mfsd8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060591.1 MGP_BALBcJ_G0027153.1 mouse_genomes_project 3 37599058 37663383 - MGP_BALBcJ_P0060591 Mfsd8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060592.1 MGP_BALBcJ_G0027153.1 mouse_genomes_project 3 37599577 37603092 - Mfsd8 protein_coding retained_intron MGP_BALBcJ_T0060593.1 MGP_BALBcJ_G0027153.1 mouse_genomes_project 3 37604139 37663223 - MGP_BALBcJ_P0060593 Mfsd8 protein_coding protein_coding MGP_BALBcJ_T0060594.1 MGP_BALBcJ_G0027153.1 mouse_genomes_project 3 37629677 37663505 - MGP_BALBcJ_P0060594 Mfsd8 protein_coding protein_coding MGP_BALBcJ_T0062087.1 MGP_BALBcJ_G0027471.1 mouse_genomes_project 3 89769057 89770402 + MGP_BALBcJ_P0062087 Sprr2k protein_coding protein_coding MGP_BALBcJ_T0062756.1 MGP_BALBcJ_G0027655.1 mouse_genomes_project 3 100428474 100465722 + MGP_BALBcJ_P0062756 Tspan2 protein_coding protein_coding MGP_BALBcJ_T0062757.1 MGP_BALBcJ_G0027655.1 mouse_genomes_project 3 100428735 100462689 + MGP_BALBcJ_P0062757 Tspan2 protein_coding protein_coding MGP_BALBcJ_T0062758.1 MGP_BALBcJ_G0027655.1 mouse_genomes_project 3 100452782 100494989 + MGP_BALBcJ_P0062758 Tspan2 protein_coding protein_coding MGP_BALBcJ_T0007562.1 MGP_BALBcJ_G0006188.1 mouse_genomes_project 3 78985100 78988237 + A830029E22Rik lincRNA lincRNA MGP_BALBcJ_T0011527.1 MGP_BALBcJ_G0009652.1 mouse_genomes_project 3 100784640 100784940 + Gm23820 misc_RNA misc_RNA MGP_BALBcJ_T0063982.1 MGP_BALBcJ_G0027902.1 mouse_genomes_project 3 136377457 136412031 + MGP_BALBcJ_P0063982 Eif4e protein_coding protein_coding MGP_BALBcJ_T0063983.1 MGP_BALBcJ_G0027902.1 mouse_genomes_project 3 136377703 136407742 + MGP_BALBcJ_P0063983 Eif4e protein_coding protein_coding MGP_BALBcJ_T0063984.1 MGP_BALBcJ_G0027902.1 mouse_genomes_project 3 136378552 136408557 + MGP_BALBcJ_P0063984 Eif4e protein_coding protein_coding MGP_BALBcJ_T0063985.1 MGP_BALBcJ_G0027902.1 mouse_genomes_project 3 136378552 136407901 + MGP_BALBcJ_P0063985 Eif4e protein_coding protein_coding MGP_BALBcJ_T0063986.1 MGP_BALBcJ_G0027902.1 mouse_genomes_project 3 136378563 136408017 + MGP_BALBcJ_P0063986 Eif4e protein_coding protein_coding MGP_BALBcJ_T0063987.1 MGP_BALBcJ_G0027902.1 mouse_genomes_project 3 136403201 136406068 + Eif4e protein_coding retained_intron MGP_BALBcJ_T0061991.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87537075 87609143 + MGP_BALBcJ_P0061991 Gatad2b protein_coding protein_coding MGP_BALBcJ_T0061992.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87537081 87598149 + Gatad2b protein_coding retained_intron MGP_BALBcJ_T0061993.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87537793 87604112 + MGP_BALBcJ_P0061993 Gatad2b protein_coding protein_coding MGP_BALBcJ_T0061994.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87586467 87588902 + Gatad2b protein_coding retained_intron MGP_BALBcJ_T0061995.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87587092 87603859 + MGP_BALBcJ_P0061995 Gatad2b protein_coding protein_coding MGP_BALBcJ_T0061996.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87587094 87603852 + Gatad2b protein_coding retained_intron MGP_BALBcJ_T0061997.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87587094 87603818 + MGP_BALBcJ_P0061997 Gatad2b protein_coding protein_coding MGP_BALBcJ_T0061998.1 MGP_BALBcJ_G0027434.1 mouse_genomes_project 3 87597014 87601727 + MGP_BALBcJ_P0061998 Gatad2b protein_coding protein_coding MGP_BALBcJ_T0064480.1 MGP_BALBcJ_G0027987.1 mouse_genomes_project 3 156144196 156401670 - MGP_BALBcJ_P0064480 Lrrc7 protein_coding protein_coding MGP_BALBcJ_T0064481.1 MGP_BALBcJ_G0027987.1 mouse_genomes_project 3 156144200 156607013 - MGP_BALBcJ_P0064481 Lrrc7 protein_coding protein_coding MGP_BALBcJ_T0064482.1 MGP_BALBcJ_G0027987.1 mouse_genomes_project 3 156145744 156401690 - MGP_BALBcJ_P0064482 Lrrc7 protein_coding protein_coding MGP_BALBcJ_T0064483.1 MGP_BALBcJ_G0027987.1 mouse_genomes_project 3 156145744 156607013 - MGP_BALBcJ_P0064483 Lrrc7 protein_coding protein_coding MGP_BALBcJ_T0064484.1 MGP_BALBcJ_G0027987.1 mouse_genomes_project 3 156459937 156606137 - Lrrc7 protein_coding retained_intron MGP_BALBcJ_T0013952.1 MGP_BALBcJ_G0012049.1 mouse_genomes_project 3 27803306 27803769 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013960.1 MGP_BALBcJ_G0012057.1 mouse_genomes_project 3 32421792 32422228 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060640.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572078 38585656 + MGP_BALBcJ_P0060640 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060641.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572124 38585854 + MGP_BALBcJ_P0060641 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060642.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572127 38588443 + MGP_BALBcJ_P0060642 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060643.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572130 38588902 + MGP_BALBcJ_P0060643 D3Ertd751e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060644.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572131 38588452 + MGP_BALBcJ_P0060644 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060645.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572131 38588452 + MGP_BALBcJ_P0060645 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060646.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572167 38588452 + MGP_BALBcJ_P0060646 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060647.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572169 38573434 + D3Ertd751e protein_coding retained_intron MGP_BALBcJ_T0060648.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572176 38587175 + MGP_BALBcJ_P0060648 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060649.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38572238 38583296 + MGP_BALBcJ_P0060649 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060650.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38574180 38585678 + MGP_BALBcJ_P0060650 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060651.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38575995 38585694 + MGP_BALBcJ_P0060651 D3Ertd751e protein_coding protein_coding MGP_BALBcJ_T0060652.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38576225 38588470 + MGP_BALBcJ_P0060652 D3Ertd751e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060653.1 MGP_BALBcJ_G0027160.1 mouse_genomes_project 3 38578093 38586029 + D3Ertd751e protein_coding retained_intron MGP_BALBcJ_T0061605.1 MGP_BALBcJ_G0027375.1 mouse_genomes_project 3 85814859 85830942 + MGP_BALBcJ_P0061605 Ubqln4 protein_coding protein_coding MGP_BALBcJ_T0061606.1 MGP_BALBcJ_G0027375.1 mouse_genomes_project 3 85814868 85824764 + Ubqln4 protein_coding retained_intron MGP_BALBcJ_T0061607.1 MGP_BALBcJ_G0027375.1 mouse_genomes_project 3 85814900 85817943 + MGP_BALBcJ_P0061607 Ubqln4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061608.1 MGP_BALBcJ_G0027375.1 mouse_genomes_project 3 85817807 85825719 + Ubqln4 protein_coding processed_transcript MGP_BALBcJ_T0061609.1 MGP_BALBcJ_G0027375.1 mouse_genomes_project 3 85825111 85826479 + Ubqln4 protein_coding retained_intron MGP_BALBcJ_T0013868.1 MGP_BALBcJ_G0011965.1 mouse_genomes_project 3 622907 623223 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062137.1 MGP_BALBcJ_G0027511.1 mouse_genomes_project 3 90886541 90896105 + MGP_BALBcJ_P0062137 S100a10 protein_coding protein_coding MGP_BALBcJ_T0062138.1 MGP_BALBcJ_G0027511.1 mouse_genomes_project 3 90886624 90892965 + S100a10 protein_coding retained_intron MGP_BALBcJ_T0062139.1 MGP_BALBcJ_G0027511.1 mouse_genomes_project 3 90892186 90895912 + MGP_BALBcJ_P0062139 S100a10 protein_coding protein_coding MGP_BALBcJ_T0061743.1 MGP_BALBcJ_G0027394.1 mouse_genomes_project 3 86411860 86417612 + MGP_BALBcJ_P0061743 Gba protein_coding protein_coding MGP_BALBcJ_T0061744.1 MGP_BALBcJ_G0027394.1 mouse_genomes_project 3 86411868 86417614 + MGP_BALBcJ_P0061744 Gba protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061745.1 MGP_BALBcJ_G0027394.1 mouse_genomes_project 3 86411872 86417614 + MGP_BALBcJ_P0061745 Gba protein_coding protein_coding MGP_BALBcJ_T0061746.1 MGP_BALBcJ_G0027394.1 mouse_genomes_project 3 86414417 86415321 + Gba protein_coding retained_intron MGP_BALBcJ_T0061747.1 MGP_BALBcJ_G0027394.1 mouse_genomes_project 3 86417149 86417899 + Gba protein_coding retained_intron MGP_BALBcJ_T0004245.1 MGP_BALBcJ_G0003734.1 mouse_genomes_project 3 77339333 77342440 - Gm37892 antisense antisense MGP_BALBcJ_T0098906.1 MGP_BALBcJ_G0036953.1 mouse_genomes_project 3 101494143 101495209 - Gm43387 sense_intronic sense_intronic MGP_BALBcJ_T0007552.1 MGP_BALBcJ_G0006180.1 mouse_genomes_project 3 72889275 72918134 + lincRNA lincRNA MGP_BALBcJ_T0099737.1 MGP_BALBcJ_G0037773.1 mouse_genomes_project 3 55155737 55155844 - Gm26166 snRNA snRNA MGP_BALBcJ_T0061268.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79546456 79570714 + MGP_BALBcJ_P0061268 Map9 protein_coding protein_coding MGP_BALBcJ_T0061269.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79546484 79566349 + MGP_BALBcJ_P0061269 Map9 protein_coding protein_coding MGP_BALBcJ_T0061270.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79546484 79582311 + MGP_BALBcJ_P0061270 Map9 protein_coding protein_coding MGP_BALBcJ_T0061271.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79546582 79570650 + MGP_BALBcJ_P0061271 Map9 protein_coding protein_coding MGP_BALBcJ_T0061272.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79546599 79582311 + MGP_BALBcJ_P0061272 Map9 protein_coding protein_coding MGP_BALBcJ_T0061273.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79567100 79569125 + Map9 protein_coding retained_intron MGP_BALBcJ_T0061274.1 MGP_BALBcJ_G0027300.1 mouse_genomes_project 3 79567461 79570433 + MGP_BALBcJ_P0061274 Map9 protein_coding protein_coding MGP_BALBcJ_T0061158.1 MGP_BALBcJ_G0027276.1 mouse_genomes_project 3 72174834 72283903 - MGP_BALBcJ_P0061158 Zbbx protein_coding protein_coding MGP_BALBcJ_T0061159.1 MGP_BALBcJ_G0027276.1 mouse_genomes_project 3 72174890 72304735 - MGP_BALBcJ_P0061159 Zbbx protein_coding protein_coding MGP_BALBcJ_T0061160.1 MGP_BALBcJ_G0027276.1 mouse_genomes_project 3 72198299 72283834 - MGP_BALBcJ_P0061160 Zbbx protein_coding protein_coding MGP_BALBcJ_T0061161.1 MGP_BALBcJ_G0027276.1 mouse_genomes_project 3 72214956 72283903 - MGP_BALBcJ_P0061161 Zbbx protein_coding protein_coding MGP_BALBcJ_T0061162.1 MGP_BALBcJ_G0027276.1 mouse_genomes_project 3 72249978 72304708 - MGP_BALBcJ_P0061162 Zbbx protein_coding protein_coding MGP_BALBcJ_T0063688.1 MGP_BALBcJ_G0027843.1 mouse_genomes_project 3 127698984 127715617 - MGP_BALBcJ_P0063688 Lrit3 protein_coding protein_coding MGP_BALBcJ_T0063689.1 MGP_BALBcJ_G0027843.1 mouse_genomes_project 3 127699394 127715617 - MGP_BALBcJ_P0063689 Lrit3 protein_coding protein_coding MGP_BALBcJ_T0063690.1 MGP_BALBcJ_G0027843.1 mouse_genomes_project 3 127702538 127712108 - Lrit3 protein_coding retained_intron MGP_BALBcJ_T0099796.1 MGP_BALBcJ_G0037832.1 mouse_genomes_project 3 135768666 135768765 - Gm25920 snRNA snRNA MGP_BALBcJ_T0098590.1 MGP_BALBcJ_G0036644.1 mouse_genomes_project 3 66769753 66769867 + Gm25621 rRNA rRNA MGP_BALBcJ_T0001385.1 MGP_BALBcJ_G0001307.1 mouse_genomes_project 3 152953834 152957819 + TEC TEC MGP_BALBcJ_T0060975.1 MGP_BALBcJ_G0027232.1 mouse_genomes_project 3 59404406 59442425 - MGP_BALBcJ_P0060975 Dhx36 protein_coding protein_coding MGP_BALBcJ_T0060976.1 MGP_BALBcJ_G0027232.1 mouse_genomes_project 3 59407038 59408981 - Dhx36 protein_coding retained_intron MGP_BALBcJ_T0060977.1 MGP_BALBcJ_G0027232.1 mouse_genomes_project 3 59420426 59424861 - Dhx36 protein_coding retained_intron MGP_BALBcJ_T0060978.1 MGP_BALBcJ_G0027232.1 mouse_genomes_project 3 59434187 59438385 - Dhx36 protein_coding retained_intron MGP_BALBcJ_T0007594.1 MGP_BALBcJ_G0006207.1 mouse_genomes_project 3 90179377 90179764 - Gm38201 lincRNA lincRNA MGP_BALBcJ_T0014069.1 MGP_BALBcJ_G0012166.1 mouse_genomes_project 3 63195385 63196142 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001191.1 MGP_BALBcJ_G0001115.1 mouse_genomes_project 3 48742822 48744007 - TEC TEC MGP_BALBcJ_T0062119.1 MGP_BALBcJ_G0027500.1 mouse_genomes_project 3 90334450 90335651 + MGP_BALBcJ_P0062119 protein_coding protein_coding MGP_BALBcJ_T0001190.1 MGP_BALBcJ_G0001114.1 mouse_genomes_project 3 48704882 48705903 - TEC TEC MGP_BALBcJ_T0063640.1 MGP_BALBcJ_G0027834.1 mouse_genomes_project 3 125542900 125545396 + MGP_BALBcJ_P0063640 Neurog2 protein_coding protein_coding MGP_BALBcJ_T0014008.1 MGP_BALBcJ_G0012105.1 mouse_genomes_project 3 46545356 46547989 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007614.1 MGP_BALBcJ_G0006227.1 mouse_genomes_project 3 99944057 99944653 + Gm43241 lincRNA lincRNA MGP_BALBcJ_T0014318.1 MGP_BALBcJ_G0012415.1 mouse_genomes_project 3 135514168 135514892 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061453.1 MGP_BALBcJ_G0027344.1 mouse_genomes_project 3 85096386 85124235 - MGP_BALBcJ_P0061453 Prcc protein_coding protein_coding MGP_BALBcJ_T0004238.1 MGP_BALBcJ_G0003728.1 mouse_genomes_project 3 62203912 62365166 - antisense antisense MGP_BALBcJ_T0004239.1 MGP_BALBcJ_G0003728.1 mouse_genomes_project 3 62356793 62365138 - antisense antisense MGP_BALBcJ_T0007723.1 MGP_BALBcJ_G0006316.1 mouse_genomes_project 3 141757846 141758751 + Gm42708 lincRNA lincRNA MGP_BALBcJ_T0013944.1 MGP_BALBcJ_G0012041.1 mouse_genomes_project 3 23855778 23859523 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101689.1 MGP_BALBcJ_G0039673.1 mouse_genomes_project 3 91807571 91808346 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101690.1 MGP_BALBcJ_G0039673.1 mouse_genomes_project 3 91807762 91808180 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0061802.1 MGP_BALBcJ_G0027402.1 mouse_genomes_project 3 86482253 86492116 - MGP_BALBcJ_P0061802 Efna1 protein_coding protein_coding MGP_BALBcJ_T0061803.1 MGP_BALBcJ_G0027402.1 mouse_genomes_project 3 86482262 86492215 - MGP_BALBcJ_P0061803 Efna1 protein_coding protein_coding MGP_BALBcJ_T0061411.1 MGP_BALBcJ_G0027337.1 mouse_genomes_project 3 84744147 84758848 + MGP_BALBcJ_P0061411 Etv3 protein_coding protein_coding MGP_BALBcJ_T0061412.1 MGP_BALBcJ_G0027337.1 mouse_genomes_project 3 84744318 84758834 + MGP_BALBcJ_P0061412 Etv3 protein_coding protein_coding MGP_BALBcJ_T0061413.1 MGP_BALBcJ_G0027337.1 mouse_genomes_project 3 84744347 84758848 + Etv3 protein_coding retained_intron MGP_BALBcJ_T0061414.1 MGP_BALBcJ_G0027337.1 mouse_genomes_project 3 84744354 84749784 + MGP_BALBcJ_P0061414 Etv3 protein_coding protein_coding MGP_BALBcJ_T0061415.1 MGP_BALBcJ_G0027337.1 mouse_genomes_project 3 84744358 84749787 + Etv3 protein_coding retained_intron MGP_BALBcJ_T0001181.1 MGP_BALBcJ_G0001106.1 mouse_genomes_project 3 48296556 48296667 + TEC TEC MGP_BALBcJ_T0063631.1 MGP_BALBcJ_G0027832.1 mouse_genomes_project 3 125448604 125449509 - MGP_BALBcJ_P0063631 protein_coding protein_coding MGP_BALBcJ_T0007505.1 MGP_BALBcJ_G0006144.1 mouse_genomes_project 3 38334600 38341797 - Gm43733 lincRNA lincRNA MGP_BALBcJ_T0007506.1 MGP_BALBcJ_G0006144.1 mouse_genomes_project 3 38335557 38341827 - Gm43733 lincRNA lincRNA MGP_BALBcJ_T0007507.1 MGP_BALBcJ_G0006144.1 mouse_genomes_project 3 38335640 38336571 - Gm43733 lincRNA lincRNA MGP_BALBcJ_T0101049.1 MGP_BALBcJ_G0039085.1 mouse_genomes_project 3 83346392 83346460 - Snord73a snoRNA snoRNA MGP_BALBcJ_T0001198.1 MGP_BALBcJ_G0001121.1 mouse_genomes_project 3 48878451 48881738 - TEC TEC MGP_BALBcJ_T0007608.1 MGP_BALBcJ_G0006221.1 mouse_genomes_project 3 96721067 96724990 + Gm12440 lincRNA lincRNA MGP_BALBcJ_T0063133.1 MGP_BALBcJ_G0027740.1 mouse_genomes_project 3 105948015 105953451 + MGP_BALBcJ_P0063133 Amigo1 protein_coding protein_coding MGP_BALBcJ_T0063134.1 MGP_BALBcJ_G0027740.1 mouse_genomes_project 3 105948024 105953452 + MGP_BALBcJ_P0063134 Amigo1 protein_coding protein_coding MGP_BALBcJ_T0063135.1 MGP_BALBcJ_G0027740.1 mouse_genomes_project 3 105948032 105953961 + MGP_BALBcJ_P0063135 Amigo1 protein_coding protein_coding MGP_BALBcJ_T0063136.1 MGP_BALBcJ_G0027740.1 mouse_genomes_project 3 105949717 105953450 + MGP_BALBcJ_P0063136 Amigo1 protein_coding protein_coding MGP_BALBcJ_T0063137.1 MGP_BALBcJ_G0027740.1 mouse_genomes_project 3 105949775 105953442 + MGP_BALBcJ_P0063137 Amigo1 protein_coding protein_coding MGP_BALBcJ_T0062255.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539279 92549126 - MGP_BALBcJ_P0062255 Psmd4 protein_coding protein_coding MGP_BALBcJ_T0062256.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539282 92549064 - MGP_BALBcJ_P0062256 Psmd4 protein_coding protein_coding MGP_BALBcJ_T0062257.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539289 92541855 - MGP_BALBcJ_P0062257 Psmd4 protein_coding protein_coding MGP_BALBcJ_T0062258.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539290 92549060 - Psmd4 protein_coding retained_intron MGP_BALBcJ_T0062259.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539290 92549055 - MGP_BALBcJ_P0062259 Psmd4 protein_coding protein_coding MGP_BALBcJ_T0062260.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539508 92549057 - Psmd4 protein_coding retained_intron MGP_BALBcJ_T0062261.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92539513 92540504 - Psmd4 protein_coding retained_intron MGP_BALBcJ_T0062262.1 MGP_BALBcJ_G0027536.1 mouse_genomes_project 3 92542410 92549062 - Psmd4 protein_coding processed_transcript MGP_BALBcJ_T0013926.1 MGP_BALBcJ_G0012023.1 mouse_genomes_project 3 16473362 16474110 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007624.1 MGP_BALBcJ_G0006235.1 mouse_genomes_project 3 103458331 103459578 - Gm43848 lincRNA lincRNA MGP_BALBcJ_T0014167.1 MGP_BALBcJ_G0012264.1 mouse_genomes_project 3 91981270 91981464 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060979.1 MGP_BALBcJ_G0027233.1 mouse_genomes_project 3 59468999 59544598 - MGP_BALBcJ_P0060979 Gpr149 protein_coding protein_coding MGP_BALBcJ_T0060980.1 MGP_BALBcJ_G0027233.1 mouse_genomes_project 3 59533559 59541596 - Gpr149 protein_coding retained_intron MGP_BALBcJ_T0101074.1 MGP_BALBcJ_G0039110.1 mouse_genomes_project 3 118524700 118524828 - Gm25013 snoRNA snoRNA MGP_BALBcJ_T0010528.1 MGP_BALBcJ_G0008653.1 mouse_genomes_project 3 115210018 115210083 + Gm22408 miRNA miRNA MGP_BALBcJ_T0010505.1 MGP_BALBcJ_G0008630.1 mouse_genomes_project 3 84846554 84846684 + Gm24109 miRNA miRNA MGP_BALBcJ_T0060266.1 MGP_BALBcJ_G0027093.1 mouse_genomes_project 3 27420952 27423819 - MGP_BALBcJ_P0060266 Actrt3 protein_coding protein_coding MGP_BALBcJ_T0059989.1 MGP_BALBcJ_G0027029.1 mouse_genomes_project 3 6079997 6114215 + MGP_BALBcJ_P0059989 Zbtb10 protein_coding protein_coding MGP_BALBcJ_T0062731.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99547720 99610329 - MGP_BALBcJ_P0062731 Slc22a15 protein_coding protein_coding MGP_BALBcJ_T0062732.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99551160 99610385 - MGP_BALBcJ_P0062732 Slc22a15 protein_coding protein_coding MGP_BALBcJ_T0062733.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99551184 99582706 - Slc22a15 protein_coding processed_transcript MGP_BALBcJ_T0062734.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99554728 99570115 - Slc22a15 protein_coding retained_intron MGP_BALBcJ_T0062735.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99555966 99610315 - MGP_BALBcJ_P0062735 Slc22a15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062736.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99563868 99568842 - Slc22a15 protein_coding retained_intron MGP_BALBcJ_T0062737.1 MGP_BALBcJ_G0027650.1 mouse_genomes_project 3 99606940 99610389 - Slc22a15 protein_coding processed_transcript MGP_BALBcJ_T0060595.1 MGP_BALBcJ_G0027154.1 mouse_genomes_project 3 37654840 37657004 - MGP_BALBcJ_P0060595 1700034I23Rik protein_coding protein_coding MGP_BALBcJ_T0007425.1 MGP_BALBcJ_G0006086.1 mouse_genomes_project 3 6234752 6265972 + C030034L19Rik lincRNA lincRNA MGP_BALBcJ_T0007426.1 MGP_BALBcJ_G0006086.1 mouse_genomes_project 3 6234756 6266887 + C030034L19Rik lincRNA lincRNA MGP_BALBcJ_T0007427.1 MGP_BALBcJ_G0006086.1 mouse_genomes_project 3 6234768 6245611 + C030034L19Rik lincRNA lincRNA MGP_BALBcJ_T0001368.1 MGP_BALBcJ_G0001290.1 mouse_genomes_project 3 145357133 145361640 - TEC TEC MGP_BALBcJ_T0063882.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133472852 133581622 - MGP_BALBcJ_P0063882 Nfkb1 protein_coding protein_coding MGP_BALBcJ_T0063883.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133472854 133496926 - MGP_BALBcJ_P0063883 Nfkb1 protein_coding protein_coding MGP_BALBcJ_T0063884.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133472942 133492505 - MGP_BALBcJ_P0063884 Nfkb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063885.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133473079 133497139 - Nfkb1 protein_coding retained_intron MGP_BALBcJ_T0063886.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133473476 133556683 - MGP_BALBcJ_P0063886 Nfkb1 protein_coding protein_coding MGP_BALBcJ_T0063887.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133473479 133558223 - MGP_BALBcJ_P0063887 Nfkb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063888.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133479566 133483235 - Nfkb1 protein_coding processed_transcript MGP_BALBcJ_T0063889.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133490567 133492568 - Nfkb1 protein_coding retained_intron MGP_BALBcJ_T0063890.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133499250 133581623 - Nfkb1 protein_coding retained_intron MGP_BALBcJ_T0063891.1 MGP_BALBcJ_G0027880.1 mouse_genomes_project 3 133506666 133511325 - Nfkb1 protein_coding retained_intron MGP_BALBcJ_T0001364.1 MGP_BALBcJ_G0001286.1 mouse_genomes_project 3 136835746 136837528 - TEC TEC MGP_BALBcJ_T0063032.1 MGP_BALBcJ_G0027709.1 mouse_genomes_project 3 104494899 104525225 - MGP_BALBcJ_P0063032 Cd53 protein_coding protein_coding MGP_BALBcJ_T0062925.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102591182 102593637 + St7l protein_coding retained_intron MGP_BALBcJ_T0062926.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102591680 102657520 + MGP_BALBcJ_P0062926 St7l protein_coding protein_coding MGP_BALBcJ_T0062927.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102591680 102654316 + MGP_BALBcJ_P0062927 St7l protein_coding protein_coding MGP_BALBcJ_T0062928.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102592244 102655226 + MGP_BALBcJ_P0062928 St7l protein_coding protein_coding MGP_BALBcJ_T0062929.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102592248 102655350 + MGP_BALBcJ_P0062929 St7l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062930.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102592257 102616983 + MGP_BALBcJ_P0062930 St7l protein_coding protein_coding MGP_BALBcJ_T0062931.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102592290 102616915 + St7l protein_coding processed_transcript MGP_BALBcJ_T0062932.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102598334 102646957 + MGP_BALBcJ_P0062932 St7l protein_coding protein_coding MGP_BALBcJ_T0062933.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102598357 102610327 + St7l protein_coding processed_transcript MGP_BALBcJ_T0062934.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102610230 102646945 + MGP_BALBcJ_P0062934 St7l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062935.1 MGP_BALBcJ_G0027685.1 mouse_genomes_project 3 102616500 102622605 + St7l protein_coding retained_intron MGP_BALBcJ_T0010543.1 MGP_BALBcJ_G0008668.1 mouse_genomes_project 3 135634988 135635069 - Mir6380 miRNA miRNA MGP_BALBcJ_T0099730.1 MGP_BALBcJ_G0037766.1 mouse_genomes_project 3 42849641 42849759 + Gm23337 snRNA snRNA MGP_BALBcJ_T0101696.1 MGP_BALBcJ_G0039677.1 mouse_genomes_project 3 125382573 125383568 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101088.1 MGP_BALBcJ_G0039124.1 mouse_genomes_project 3 151889918 151890043 + Gm24395 snoRNA snoRNA MGP_BALBcJ_T0014258.1 MGP_BALBcJ_G0012355.1 mouse_genomes_project 3 115081760 115082355 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102476.1 MGP_BALBcJ_G0040292.1 mouse_genomes_project 3 87715229 87717288 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060151.1 MGP_BALBcJ_G0027075.1 mouse_genomes_project 3 17194078 17250954 - MGP_BALBcJ_P0060151 Agtr1b protein_coding protein_coding MGP_BALBcJ_T0060152.1 MGP_BALBcJ_G0027075.1 mouse_genomes_project 3 17194502 17250901 - MGP_BALBcJ_P0060152 Agtr1b protein_coding protein_coding MGP_BALBcJ_T0099780.1 MGP_BALBcJ_G0037816.1 mouse_genomes_project 3 102428465 102428555 + Gm24223 snRNA snRNA MGP_BALBcJ_T0001299.1 MGP_BALBcJ_G0001222.1 mouse_genomes_project 3 119318713 119320001 + TEC TEC MGP_BALBcJ_T0062173.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91875701 91882746 + MGP_BALBcJ_P0062173 Celf3 protein_coding protein_coding MGP_BALBcJ_T0062174.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91876237 91889591 + MGP_BALBcJ_P0062174 Celf3 protein_coding protein_coding MGP_BALBcJ_T0062175.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91876484 91889592 + MGP_BALBcJ_P0062175 Celf3 protein_coding protein_coding MGP_BALBcJ_T0062176.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91876513 91889595 + MGP_BALBcJ_P0062176 Celf3 protein_coding protein_coding MGP_BALBcJ_T0062177.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91876523 91884996 + Celf3 protein_coding retained_intron MGP_BALBcJ_T0062178.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91879984 91884639 + Celf3 protein_coding processed_transcript MGP_BALBcJ_T0062179.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91880151 91889591 + Celf3 protein_coding processed_transcript MGP_BALBcJ_T0062180.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91881754 91889591 + Celf3 protein_coding retained_intron MGP_BALBcJ_T0062181.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91881791 91884367 + MGP_BALBcJ_P0062181 Celf3 protein_coding protein_coding MGP_BALBcJ_T0062182.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91881798 91884712 + MGP_BALBcJ_P0062182 Celf3 protein_coding protein_coding MGP_BALBcJ_T0062183.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91882704 91889580 + Celf3 protein_coding retained_intron MGP_BALBcJ_T0062184.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91884073 91886039 + Celf3 protein_coding retained_intron MGP_BALBcJ_T0062185.1 MGP_BALBcJ_G0027523.1 mouse_genomes_project 3 91884629 91886986 + Celf3 protein_coding retained_intron MGP_BALBcJ_T0001220.1 MGP_BALBcJ_G0001143.1 mouse_genomes_project 3 55395339 55396534 + TEC TEC MGP_BALBcJ_T0060350.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29415435 29451458 - MGP_BALBcJ_P0060350 Gnb4 protein_coding protein_coding MGP_BALBcJ_T0060351.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29419101 29451398 - Gnb4 protein_coding retained_intron MGP_BALBcJ_T0060352.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29419101 29451390 - MGP_BALBcJ_P0060352 Gnb4 protein_coding protein_coding MGP_BALBcJ_T0060353.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29420158 29451395 - MGP_BALBcJ_P0060353 Gnb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060354.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29422809 29433282 - Gnb4 protein_coding retained_intron MGP_BALBcJ_T0060355.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29426237 29451352 - MGP_BALBcJ_P0060355 Gnb4 protein_coding protein_coding MGP_BALBcJ_T0060356.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29427314 29451398 - Gnb4 protein_coding retained_intron MGP_BALBcJ_T0060357.1 MGP_BALBcJ_G0027112.1 mouse_genomes_project 3 29434947 29451402 - Gnb4 protein_coding retained_intron MGP_BALBcJ_T0062052.1 MGP_BALBcJ_G0027448.1 mouse_genomes_project 3 87857004 87859723 + MGP_BALBcJ_P0062052 S100a4 protein_coding protein_coding MGP_BALBcJ_T0062053.1 MGP_BALBcJ_G0027448.1 mouse_genomes_project 3 87858588 87859511 + MGP_BALBcJ_P0062053 S100a4 protein_coding protein_coding MGP_BALBcJ_T0014338.1 MGP_BALBcJ_G0012435.1 mouse_genomes_project 3 141736513 141737338 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060423.1 MGP_BALBcJ_G0027122.1 mouse_genomes_project 3 31459833 31461890 + MGP_BALBcJ_P0060423 Sox2 protein_coding protein_coding MGP_BALBcJ_T0014153.1 MGP_BALBcJ_G0012250.1 mouse_genomes_project 3 89658953 89659254 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063975.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136310523 136340853 - MGP_BALBcJ_P0063975 Metap1 protein_coding protein_coding MGP_BALBcJ_T0063976.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136311248 136320492 - MGP_BALBcJ_P0063976 Metap1 protein_coding protein_coding MGP_BALBcJ_T0063977.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136317805 136326654 - Metap1 protein_coding retained_intron MGP_BALBcJ_T0063978.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136317866 136326743 - Metap1 protein_coding retained_intron MGP_BALBcJ_T0063979.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136320490 136333135 - Metap1 protein_coding processed_transcript MGP_BALBcJ_T0063980.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136326998 136340737 - MGP_BALBcJ_P0063980 Metap1 protein_coding protein_coding MGP_BALBcJ_T0063981.1 MGP_BALBcJ_G0027901.1 mouse_genomes_project 3 136331608 136340707 - Metap1 protein_coding retained_intron MGP_BALBcJ_T0064084.1 MGP_BALBcJ_G0027921.1 mouse_genomes_project 3 142542114 142582090 - MGP_BALBcJ_P0064084 Sh3glb1 protein_coding protein_coding MGP_BALBcJ_T0064085.1 MGP_BALBcJ_G0027921.1 mouse_genomes_project 3 142543331 142555891 - MGP_BALBcJ_P0064085 Sh3glb1 protein_coding protein_coding MGP_BALBcJ_T0064086.1 MGP_BALBcJ_G0027921.1 mouse_genomes_project 3 142545347 142582303 - MGP_BALBcJ_P0064086 Sh3glb1 protein_coding protein_coding MGP_BALBcJ_T0064087.1 MGP_BALBcJ_G0027921.1 mouse_genomes_project 3 142547280 142582315 - MGP_BALBcJ_P0064087 Sh3glb1 protein_coding protein_coding MGP_BALBcJ_T0064088.1 MGP_BALBcJ_G0027921.1 mouse_genomes_project 3 142549782 142582185 - MGP_BALBcJ_P0064088 Sh3glb1 protein_coding protein_coding MGP_BALBcJ_T0064089.1 MGP_BALBcJ_G0027921.1 mouse_genomes_project 3 142550414 142565057 - MGP_BALBcJ_P0064089 Sh3glb1 protein_coding protein_coding MGP_BALBcJ_T0102477.1 MGP_BALBcJ_G0040293.1 mouse_genomes_project 3 88099392 88101275 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061254.1 MGP_BALBcJ_G0027296.1 mouse_genomes_project 3 79145321 79164908 - MGP_BALBcJ_P0061254 Tdo2 protein_coding protein_coding MGP_BALBcJ_T0061255.1 MGP_BALBcJ_G0027296.1 mouse_genomes_project 3 79146954 79152306 - Tdo2 protein_coding processed_transcript MGP_BALBcJ_T0061256.1 MGP_BALBcJ_G0027296.1 mouse_genomes_project 3 79147021 79164908 - MGP_BALBcJ_P0061256 Tdo2 protein_coding protein_coding MGP_BALBcJ_T0061257.1 MGP_BALBcJ_G0027296.1 mouse_genomes_project 3 79149257 79152258 - Tdo2 protein_coding retained_intron MGP_BALBcJ_T0001267.1 MGP_BALBcJ_G0001190.1 mouse_genomes_project 3 94370322 94370844 + TEC TEC MGP_BALBcJ_T0004396.1 MGP_BALBcJ_G0003834.1 mouse_genomes_project 3 155977881 155979476 + 1810013D15Rik antisense antisense MGP_BALBcJ_T0004397.1 MGP_BALBcJ_G0003834.1 mouse_genomes_project 3 155978143 155990687 + 1810013D15Rik antisense antisense MGP_BALBcJ_T0017983.1 MGP_BALBcJ_G0015469.1 mouse_genomes_project 3 152367527 152370939 + AI606473 processed_transcript lincRNA MGP_BALBcJ_T0017984.1 MGP_BALBcJ_G0015469.1 mouse_genomes_project 3 152368689 152369487 + AI606473 processed_transcript retained_intron MGP_BALBcJ_T0098903.1 MGP_BALBcJ_G0036950.1 mouse_genomes_project 3 101042821 101045090 + Gm43061 sense_intronic sense_intronic MGP_BALBcJ_T0063969.1 MGP_BALBcJ_G0027900.1 mouse_genomes_project 3 136294493 136307068 + MGP_BALBcJ_P0063969 Adh5 protein_coding protein_coding MGP_BALBcJ_T0063970.1 MGP_BALBcJ_G0027900.1 mouse_genomes_project 3 136294511 136297347 + Adh5 protein_coding retained_intron MGP_BALBcJ_T0063971.1 MGP_BALBcJ_G0027900.1 mouse_genomes_project 3 136294512 136298235 + Adh5 protein_coding retained_intron MGP_BALBcJ_T0063972.1 MGP_BALBcJ_G0027900.1 mouse_genomes_project 3 136294570 136296802 + Adh5 protein_coding retained_intron MGP_BALBcJ_T0063973.1 MGP_BALBcJ_G0027900.1 mouse_genomes_project 3 136294570 136299338 + MGP_BALBcJ_P0063973 Adh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063974.1 MGP_BALBcJ_G0027900.1 mouse_genomes_project 3 136294581 136306372 + MGP_BALBcJ_P0063974 Adh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001240.1 MGP_BALBcJ_G0001163.1 mouse_genomes_project 3 73084597 73086774 + TEC TEC MGP_BALBcJ_T0101066.1 MGP_BALBcJ_G0039102.1 mouse_genomes_project 3 105792726 105792857 + Gm25592 snoRNA snoRNA MGP_BALBcJ_T0099738.1 MGP_BALBcJ_G0037774.1 mouse_genomes_project 3 55834930 55835032 + Gm22491 snRNA snRNA MGP_BALBcJ_T0101084.1 MGP_BALBcJ_G0039120.1 mouse_genomes_project 3 142450933 142451061 - Gm24406 snoRNA snoRNA MGP_BALBcJ_T0014101.1 MGP_BALBcJ_G0012198.1 mouse_genomes_project 3 71385112 71385449 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099791.1 MGP_BALBcJ_G0037827.1 mouse_genomes_project 3 129912850 129912957 - Gm22421 snRNA snRNA MGP_BALBcJ_T0007638.1 MGP_BALBcJ_G0006246.1 mouse_genomes_project 3 109682378 109893813 + lincRNA lincRNA MGP_BALBcJ_T0099735.1 MGP_BALBcJ_G0037771.1 mouse_genomes_project 3 52458240 52458347 + Gm25404 snRNA snRNA MGP_BALBcJ_T0013875.1 MGP_BALBcJ_G0011972.1 mouse_genomes_project 3 2984662 2985078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014158.1 MGP_BALBcJ_G0012255.1 mouse_genomes_project 3 90499002 90499693 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064303.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150304848 150362787 - MGP_BALBcJ_P0064303 Fam73a protein_coding protein_coding MGP_BALBcJ_T0064304.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150306930 150362785 - MGP_BALBcJ_P0064304 Fam73a protein_coding protein_coding MGP_BALBcJ_T0064305.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150312587 150362763 - MGP_BALBcJ_P0064305 Fam73a protein_coding protein_coding MGP_BALBcJ_T0064306.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150312754 150316564 - Fam73a protein_coding retained_intron MGP_BALBcJ_T0064307.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150321963 150347887 - MGP_BALBcJ_P0064307 Fam73a protein_coding protein_coding MGP_BALBcJ_T0064308.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150322137 150329672 - Fam73a protein_coding retained_intron MGP_BALBcJ_T0064309.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150329214 150359275 - MGP_BALBcJ_P0064309 Fam73a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064310.1 MGP_BALBcJ_G0027961.1 mouse_genomes_project 3 150358821 150362764 - Fam73a protein_coding retained_intron MGP_BALBcJ_T0004225.1 MGP_BALBcJ_G0003718.1 mouse_genomes_project 3 50342545 50347674 + Gm16206 antisense antisense MGP_BALBcJ_T0004371.1 MGP_BALBcJ_G0003815.1 mouse_genomes_project 3 136059995 136088970 - 0610031O16Rik antisense antisense MGP_BALBcJ_T0004372.1 MGP_BALBcJ_G0003815.1 mouse_genomes_project 3 136067051 136088970 - 0610031O16Rik antisense antisense MGP_BALBcJ_T0004373.1 MGP_BALBcJ_G0003815.1 mouse_genomes_project 3 136075810 136088986 - 0610031O16Rik antisense antisense MGP_BALBcJ_T0004374.1 MGP_BALBcJ_G0003815.1 mouse_genomes_project 3 136078317 136089712 - 0610031O16Rik antisense antisense MGP_BALBcJ_T0062549.1 MGP_BALBcJ_G0027600.1 mouse_genomes_project 3 94248414 94270413 + MGP_BALBcJ_P0062549 Ankrd35 protein_coding protein_coding MGP_BALBcJ_T0062550.1 MGP_BALBcJ_G0027600.1 mouse_genomes_project 3 94248610 94270390 + MGP_BALBcJ_P0062550 Ankrd35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062551.1 MGP_BALBcJ_G0027600.1 mouse_genomes_project 3 94258667 94261799 + Ankrd35 protein_coding processed_transcript MGP_BALBcJ_T0061196.1 MGP_BALBcJ_G0027284.1 mouse_genomes_project 3 76476698 76571453 + MGP_BALBcJ_P0061196 protein_coding protein_coding MGP_BALBcJ_T0061197.1 MGP_BALBcJ_G0027284.1 mouse_genomes_project 3 76486683 76605559 + MGP_BALBcJ_P0061197 protein_coding protein_coding MGP_BALBcJ_T0061198.1 MGP_BALBcJ_G0027284.1 mouse_genomes_project 3 76486686 76572711 + MGP_BALBcJ_P0061198 protein_coding protein_coding MGP_BALBcJ_T0062912.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102521769 102544835 - MGP_BALBcJ_P0062912 Mov10 protein_coding protein_coding MGP_BALBcJ_T0062913.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102521769 102544577 - MGP_BALBcJ_P0062913 Mov10 protein_coding protein_coding MGP_BALBcJ_T0062914.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102521769 102544835 - MGP_BALBcJ_P0062914 Mov10 protein_coding protein_coding MGP_BALBcJ_T0062915.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102521769 102544514 - MGP_BALBcJ_P0062915 Mov10 protein_coding protein_coding MGP_BALBcJ_T0062916.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102521769 102544835 - MGP_BALBcJ_P0062916 Mov10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062917.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102532609 102543626 - Mov10 protein_coding processed_transcript MGP_BALBcJ_T0062918.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102532650 102544835 - MGP_BALBcJ_P0062918 Mov10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062919.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102533467 102544388 - Mov10 protein_coding retained_intron MGP_BALBcJ_T0062920.1 MGP_BALBcJ_G0027683.1 mouse_genomes_project 3 102533488 102544573 - Mov10 protein_coding processed_transcript MGP_BALBcJ_T0001107.1 MGP_BALBcJ_G0001032.1 mouse_genomes_project 3 7464040 7465827 + TEC TEC MGP_BALBcJ_T0060189.1 MGP_BALBcJ_G0027081.1 mouse_genomes_project 3 23994861 24056637 + MGP_BALBcJ_P0060189 Nceh1 protein_coding protein_coding MGP_BALBcJ_T0060190.1 MGP_BALBcJ_G0027081.1 mouse_genomes_project 3 23994900 24037993 + Nceh1 protein_coding retained_intron MGP_BALBcJ_T0060191.1 MGP_BALBcJ_G0027081.1 mouse_genomes_project 3 23994900 24094709 + MGP_BALBcJ_P0060191 Nceh1 protein_coding protein_coding MGP_BALBcJ_T0060192.1 MGP_BALBcJ_G0027081.1 mouse_genomes_project 3 23994900 24034493 + MGP_BALBcJ_P0060192 Nceh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060193.1 MGP_BALBcJ_G0027081.1 mouse_genomes_project 3 24000337 24051263 + Nceh1 protein_coding processed_transcript MGP_BALBcJ_T0014074.1 MGP_BALBcJ_G0012171.1 mouse_genomes_project 3 64677609 64678130 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014307.1 MGP_BALBcJ_G0012404.1 mouse_genomes_project 3 133052157 133052833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060744.1 MGP_BALBcJ_G0027180.1 mouse_genomes_project 3 50409901 50553523 - MGP_BALBcJ_P0060744 Frem2 protein_coding protein_coding MGP_BALBcJ_T0060745.1 MGP_BALBcJ_G0027180.1 mouse_genomes_project 3 50411647 50439309 - Frem2 protein_coding processed_transcript MGP_BALBcJ_T0060746.1 MGP_BALBcJ_G0027180.1 mouse_genomes_project 3 50411751 50418712 - Frem2 protein_coding retained_intron MGP_BALBcJ_T0060747.1 MGP_BALBcJ_G0027180.1 mouse_genomes_project 3 50543331 50548398 - Frem2 protein_coding retained_intron MGP_BALBcJ_T0007477.1 MGP_BALBcJ_G0006124.1 mouse_genomes_project 3 31584918 31595120 + Gm38509 lincRNA lincRNA MGP_BALBcJ_T0060570.1 MGP_BALBcJ_G0027150.1 mouse_genomes_project 3 37479216 37497240 + MGP_BALBcJ_P0060570 Slc25a31 protein_coding protein_coding MGP_BALBcJ_T0062781.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100722014 100759537 + MGP_BALBcJ_P0062781 Csde1 protein_coding protein_coding MGP_BALBcJ_T0062782.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100722056 100759344 + MGP_BALBcJ_P0062782 Csde1 protein_coding protein_coding MGP_BALBcJ_T0062783.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100722062 100759539 + MGP_BALBcJ_P0062783 Csde1 protein_coding protein_coding MGP_BALBcJ_T0062784.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100722069 100759055 + MGP_BALBcJ_P0062784 Csde1 protein_coding protein_coding MGP_BALBcJ_T0062785.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100722113 100759157 + MGP_BALBcJ_P0062785 Csde1 protein_coding protein_coding MGP_BALBcJ_T0062786.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100730155 100743895 + Csde1 protein_coding retained_intron MGP_BALBcJ_T0062787.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100730248 100732051 + Csde1 protein_coding retained_intron MGP_BALBcJ_T0062788.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100731318 100745023 + Csde1 protein_coding processed_transcript MGP_BALBcJ_T0062789.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100740877 100745777 + Csde1 protein_coding processed_transcript MGP_BALBcJ_T0062790.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100741136 100745202 + Csde1 protein_coding retained_intron MGP_BALBcJ_T0062791.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100741165 100747934 + MGP_BALBcJ_P0062791 Csde1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062792.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100744330 100759139 + MGP_BALBcJ_P0062792 Csde1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062793.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100744679 100745379 + Csde1 protein_coding retained_intron MGP_BALBcJ_T0062794.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100751131 100752203 + Csde1 protein_coding retained_intron MGP_BALBcJ_T0062795.1 MGP_BALBcJ_G0027660.1 mouse_genomes_project 3 100757175 100758254 + Csde1 protein_coding retained_intron MGP_BALBcJ_T0014219.1 MGP_BALBcJ_G0012316.1 mouse_genomes_project 3 105077626 105078371 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062936.1 MGP_BALBcJ_G0027686.1 mouse_genomes_project 3 102675147 102691899 - MGP_BALBcJ_P0062936 Wnt2b protein_coding protein_coding MGP_BALBcJ_T0062937.1 MGP_BALBcJ_G0027686.1 mouse_genomes_project 3 102690391 102691699 - Wnt2b protein_coding retained_intron MGP_BALBcJ_T0064173.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144412004 144425217 - MGP_BALBcJ_P0064173 Spata1 protein_coding protein_coding MGP_BALBcJ_T0064174.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144412010 144447848 - MGP_BALBcJ_P0064174 Spata1 protein_coding protein_coding MGP_BALBcJ_T0064175.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144412011 144453754 - MGP_BALBcJ_P0064175 Spata1 protein_coding protein_coding MGP_BALBcJ_T0064176.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144421426 144431683 - MGP_BALBcJ_P0064176 Spata1 protein_coding protein_coding MGP_BALBcJ_T0064177.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144425103 144437496 - Spata1 protein_coding processed_transcript MGP_BALBcJ_T0064178.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144430770 144453710 - Spata1 protein_coding processed_transcript MGP_BALBcJ_T0064179.1 MGP_BALBcJ_G0027943.1 mouse_genomes_project 3 144439385 144449118 - MGP_BALBcJ_P0064179 Spata1 protein_coding protein_coding MGP_BALBcJ_T0063109.1 MGP_BALBcJ_G0027734.1 mouse_genomes_project 3 105759199 105768261 - MGP_BALBcJ_P0063109 Gstm1 protein_coding protein_coding MGP_BALBcJ_T0063110.1 MGP_BALBcJ_G0027734.1 mouse_genomes_project 3 105759205 105760263 - Gstm1 protein_coding processed_transcript MGP_BALBcJ_T0063111.1 MGP_BALBcJ_G0027734.1 mouse_genomes_project 3 105759335 105766888 - MGP_BALBcJ_P0063111 Gstm1 protein_coding protein_coding MGP_BALBcJ_T0063112.1 MGP_BALBcJ_G0027734.1 mouse_genomes_project 3 105759571 105768094 - MGP_BALBcJ_P0063112 Gstm1 protein_coding protein_coding MGP_BALBcJ_T0101017.1 MGP_BALBcJ_G0039053.1 mouse_genomes_project 3 5486907 5487026 - Gm23670 snoRNA snoRNA MGP_BALBcJ_T0062402.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93264636 93270071 - MGP_BALBcJ_P0062402 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062403.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93264637 93270069 - MGP_BALBcJ_P0062403 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062404.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93264638 93265508 - Ecm1 protein_coding retained_intron MGP_BALBcJ_T0062405.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93266626 93270051 - MGP_BALBcJ_P0062405 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062406.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93266638 93270069 - MGP_BALBcJ_P0062406 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062407.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93266699 93270071 - MGP_BALBcJ_P0062407 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062408.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93267101 93270046 - MGP_BALBcJ_P0062408 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062409.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93267262 93270051 - MGP_BALBcJ_P0062409 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0062410.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93267851 93268725 - Ecm1 protein_coding retained_intron MGP_BALBcJ_T0062411.1 MGP_BALBcJ_G0027563.1 mouse_genomes_project 3 93268385 93270071 - MGP_BALBcJ_P0062411 Ecm1 protein_coding protein_coding MGP_BALBcJ_T0014020.1 MGP_BALBcJ_G0012117.1 mouse_genomes_project 3 49119305 49120057 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062088.1 MGP_BALBcJ_G0027472.1 mouse_genomes_project 3 89773269 89775186 - MGP_BALBcJ_P0062088 Sprr1b protein_coding protein_coding MGP_BALBcJ_T0062691.1 MGP_BALBcJ_G0027638.1 mouse_genomes_project 3 97841497 97886359 + MGP_BALBcJ_P0062691 Gdap2 protein_coding protein_coding MGP_BALBcJ_T0062692.1 MGP_BALBcJ_G0027638.1 mouse_genomes_project 3 97841634 97881848 + MGP_BALBcJ_P0062692 Gdap2 protein_coding protein_coding MGP_BALBcJ_T0062693.1 MGP_BALBcJ_G0027638.1 mouse_genomes_project 3 97841660 97849069 + Gdap2 protein_coding processed_transcript MGP_BALBcJ_T0062694.1 MGP_BALBcJ_G0027638.1 mouse_genomes_project 3 97873963 97886033 + MGP_BALBcJ_P0062694 Gdap2 protein_coding protein_coding MGP_BALBcJ_T0062695.1 MGP_BALBcJ_G0027638.1 mouse_genomes_project 3 97880064 97881848 + Gdap2 protein_coding retained_intron MGP_BALBcJ_T0007687.1 MGP_BALBcJ_G0006285.1 mouse_genomes_project 3 132057933 132069674 + Gm43194 lincRNA lincRNA MGP_BALBcJ_T0007688.1 MGP_BALBcJ_G0006285.1 mouse_genomes_project 3 132058071 132071171 + Gm43194 lincRNA lincRNA MGP_BALBcJ_T0101695.1 MGP_BALBcJ_G0039676.1 mouse_genomes_project 3 122146147 122146577 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0001346.1 MGP_BALBcJ_G0001268.1 mouse_genomes_project 3 128805990 128806701 + TEC TEC MGP_BALBcJ_T0098586.1 MGP_BALBcJ_G0036640.1 mouse_genomes_project 3 22344538 22344673 + Gm24250 rRNA rRNA MGP_BALBcJ_T0101914.1 MGP_BALBcJ_G0039796.1 mouse_genomes_project 3 142796076 142808263 - transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0013885.1 MGP_BALBcJ_G0011982.1 mouse_genomes_project 3 5422342 5423572 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001235.1 MGP_BALBcJ_G0001158.1 mouse_genomes_project 3 70160039 70161904 - TEC TEC MGP_BALBcJ_T0060274.1 MGP_BALBcJ_G0027096.1 mouse_genomes_project 3 27468258 27495995 + MGP_BALBcJ_P0060274 Lrriq4 protein_coding protein_coding MGP_BALBcJ_T0060275.1 MGP_BALBcJ_G0027096.1 mouse_genomes_project 3 27469081 27495863 + MGP_BALBcJ_P0060275 Lrriq4 protein_coding protein_coding MGP_BALBcJ_T0060276.1 MGP_BALBcJ_G0027096.1 mouse_genomes_project 3 27471637 27495863 + MGP_BALBcJ_P0060276 Lrriq4 protein_coding protein_coding MGP_BALBcJ_T0101053.1 MGP_BALBcJ_G0039089.1 mouse_genomes_project 3 84803133 84803253 - Gm25167 snoRNA snoRNA MGP_BALBcJ_T0011513.1 MGP_BALBcJ_G0009638.1 mouse_genomes_project 3 27419225 27419637 - 1600017P15Rik misc_RNA misc_RNA MGP_BALBcJ_T0061205.1 MGP_BALBcJ_G0027286.1 mouse_genomes_project 3 76735081 76747417 + Ppid protein_coding retained_intron MGP_BALBcJ_T0061206.1 MGP_BALBcJ_G0027286.1 mouse_genomes_project 3 76735104 76747791 + MGP_BALBcJ_P0061206 Ppid protein_coding protein_coding MGP_BALBcJ_T0061207.1 MGP_BALBcJ_G0027286.1 mouse_genomes_project 3 76735227 76739043 + Ppid protein_coding processed_transcript MGP_BALBcJ_T0061208.1 MGP_BALBcJ_G0027286.1 mouse_genomes_project 3 76737428 76741496 + MGP_BALBcJ_P0061208 Ppid protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061209.1 MGP_BALBcJ_G0027286.1 mouse_genomes_project 3 76739891 76741923 + Ppid protein_coding retained_intron MGP_BALBcJ_T0061210.1 MGP_BALBcJ_G0027286.1 mouse_genomes_project 3 76742443 76746469 + Ppid protein_coding retained_intron MGP_BALBcJ_T0007561.1 MGP_BALBcJ_G0006187.1 mouse_genomes_project 3 78207058 78207881 + Gm42476 lincRNA lincRNA MGP_BALBcJ_T0017921.1 MGP_BALBcJ_G0015445.1 mouse_genomes_project 3 79104810 79111396 - Gm9989 processed_transcript lincRNA MGP_BALBcJ_T0017922.1 MGP_BALBcJ_G0015445.1 mouse_genomes_project 3 79108265 79111461 - Gm9989 processed_transcript retained_intron MGP_BALBcJ_T0061309.1 MGP_BALBcJ_G0027312.1 mouse_genomes_project 3 81272427 81339184 - MGP_BALBcJ_P0061309 Mnd1 protein_coding protein_coding MGP_BALBcJ_T0102479.1 MGP_BALBcJ_G0040295.1 mouse_genomes_project 3 90408517 90408742 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102495.1 MGP_BALBcJ_G0040311.1 mouse_genomes_project 3 105696984 105699311 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004270.1 MGP_BALBcJ_G0003751.1 mouse_genomes_project 3 89427188 89433314 + Gm43735 antisense antisense MGP_BALBcJ_T0062895.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102115628 102179869 - MGP_BALBcJ_P0062895 Lrig2 protein_coding protein_coding MGP_BALBcJ_T0062896.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102172352 102230122 - MGP_BALBcJ_P0062896 Lrig2 protein_coding protein_coding MGP_BALBcJ_T0062897.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102172353 102230110 - MGP_BALBcJ_P0062897 Lrig2 protein_coding protein_coding MGP_BALBcJ_T0062898.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102174927 102198181 - Lrig2 protein_coding retained_intron MGP_BALBcJ_T0062899.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102175485 102230138 - MGP_BALBcJ_P0062899 Lrig2 protein_coding protein_coding MGP_BALBcJ_T0062900.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102175701 102230200 - Lrig2 protein_coding retained_intron MGP_BALBcJ_T0062901.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102177562 102181181 - Lrig2 protein_coding retained_intron MGP_BALBcJ_T0062902.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102199582 102229943 - Lrig2 protein_coding retained_intron MGP_BALBcJ_T0062903.1 MGP_BALBcJ_G0027678.1 mouse_genomes_project 3 102208669 102209705 - Lrig2 protein_coding retained_intron MGP_BALBcJ_T0004235.1 MGP_BALBcJ_G0003726.1 mouse_genomes_project 3 59276084 59279093 - 9330121J05Rik antisense antisense MGP_BALBcJ_T0062124.1 MGP_BALBcJ_G0027503.1 mouse_genomes_project 3 90417334 90418911 + MGP_BALBcJ_P0062124 Gm4858 protein_coding protein_coding MGP_BALBcJ_T0062504.1 MGP_BALBcJ_G0027579.1 mouse_genomes_project 3 93743666 93745568 - MGP_BALBcJ_P0062504 Bola1 protein_coding protein_coding MGP_BALBcJ_T0062505.1 MGP_BALBcJ_G0027579.1 mouse_genomes_project 3 93743666 93744665 - MGP_BALBcJ_P0062505 Bola1 protein_coding protein_coding MGP_BALBcJ_T0062506.1 MGP_BALBcJ_G0027579.1 mouse_genomes_project 3 93743941 93761099 - MGP_BALBcJ_P0062506 Bola1 protein_coding protein_coding MGP_BALBcJ_T0062501.1 MGP_BALBcJ_G0027578.1 mouse_genomes_project 3 93728301 93742600 + MGP_BALBcJ_P0062501 Sv2a protein_coding protein_coding MGP_BALBcJ_T0062502.1 MGP_BALBcJ_G0027578.1 mouse_genomes_project 3 93733784 93735545 + Sv2a protein_coding retained_intron MGP_BALBcJ_T0062503.1 MGP_BALBcJ_G0027578.1 mouse_genomes_project 3 93739628 93742597 + Sv2a protein_coding processed_transcript MGP_BALBcJ_T0060479.1 MGP_BALBcJ_G0027133.1 mouse_genomes_project 3 33469454 33476740 - MGP_BALBcJ_P0060479 Ccna2 protein_coding protein_coding MGP_BALBcJ_T0060480.1 MGP_BALBcJ_G0027133.1 mouse_genomes_project 3 33470224 33471435 - Ccna2 protein_coding processed_transcript MGP_BALBcJ_T0060481.1 MGP_BALBcJ_G0027133.1 mouse_genomes_project 3 33470567 33476141 - MGP_BALBcJ_P0060481 Ccna2 protein_coding protein_coding MGP_BALBcJ_T0060482.1 MGP_BALBcJ_G0027133.1 mouse_genomes_project 3 33470567 33476517 - MGP_BALBcJ_P0060482 Ccna2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060483.1 MGP_BALBcJ_G0027133.1 mouse_genomes_project 3 33475040 33476554 - Ccna2 protein_coding retained_intron MGP_BALBcJ_T0014098.1 MGP_BALBcJ_G0012195.1 mouse_genomes_project 3 69268940 69269159 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061344.1 MGP_BALBcJ_G0027320.1 mouse_genomes_project 3 82007222 82171623 + MGP_BALBcJ_P0061344 Fbxw7 protein_coding protein_coding MGP_BALBcJ_T0061345.1 MGP_BALBcJ_G0027320.1 mouse_genomes_project 3 82007432 82170107 + Fbxw7 protein_coding retained_intron MGP_BALBcJ_T0061346.1 MGP_BALBcJ_G0027320.1 mouse_genomes_project 3 82055545 82171623 + MGP_BALBcJ_P0061346 Fbxw7 protein_coding protein_coding MGP_BALBcJ_T0061347.1 MGP_BALBcJ_G0027320.1 mouse_genomes_project 3 82117600 82171622 + MGP_BALBcJ_P0061347 Fbxw7 protein_coding protein_coding MGP_BALBcJ_T0061348.1 MGP_BALBcJ_G0027320.1 mouse_genomes_project 3 82143868 82170071 + MGP_BALBcJ_P0061348 Fbxw7 protein_coding protein_coding MGP_BALBcJ_T0063230.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106680330 106689374 - MGP_BALBcJ_P0063230 Prpf38b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063231.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106680332 106689405 - MGP_BALBcJ_P0063231 Prpf38b protein_coding protein_coding MGP_BALBcJ_T0063232.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106680672 106689145 - MGP_BALBcJ_P0063232 Prpf38b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063233.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106681786 106683111 - Prpf38b protein_coding retained_intron MGP_BALBcJ_T0063234.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106682146 106685491 - Prpf38b protein_coding processed_transcript MGP_BALBcJ_T0063235.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106684086 106689388 - Prpf38b protein_coding retained_intron MGP_BALBcJ_T0063236.1 MGP_BALBcJ_G0027760.1 mouse_genomes_project 3 106684089 106688306 - Prpf38b protein_coding retained_intron MGP_BALBcJ_T0001218.1 MGP_BALBcJ_G0001141.1 mouse_genomes_project 3 54529599 54530775 - TEC TEC MGP_BALBcJ_T0098879.1 MGP_BALBcJ_G0036927.1 mouse_genomes_project 3 82757470 82775350 - Gm15535 sense_intronic sense_intronic MGP_BALBcJ_T0098880.1 MGP_BALBcJ_G0036927.1 mouse_genomes_project 3 82759603 82775259 - Gm15535 sense_intronic sense_intronic MGP_BALBcJ_T0001116.1 MGP_BALBcJ_G0001041.1 mouse_genomes_project 3 21973029 21973223 + TEC TEC MGP_BALBcJ_T0017935.1 MGP_BALBcJ_G0015451.1 mouse_genomes_project 3 93796907 93798566 - Gm20627 processed_transcript lincRNA MGP_BALBcJ_T0017936.1 MGP_BALBcJ_G0015451.1 mouse_genomes_project 3 93796909 93797758 - Gm20627 processed_transcript retained_intron MGP_BALBcJ_T0004262.1 MGP_BALBcJ_G0003746.1 mouse_genomes_project 3 86550411 86560393 + 4731419I09Rik antisense antisense MGP_BALBcJ_T0060968.1 MGP_BALBcJ_G0027230.1 mouse_genomes_project 3 58295482 58299184 - MGP_BALBcJ_P0060968 B430305J03Rik protein_coding protein_coding MGP_BALBcJ_T0063436.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119317152 119348926 + MGP_BALBcJ_P0063436 Cnn3 protein_coding protein_coding MGP_BALBcJ_T0063437.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119317200 119348918 + Cnn3 protein_coding retained_intron MGP_BALBcJ_T0063438.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119317437 119348531 + MGP_BALBcJ_P0063438 Cnn3 protein_coding protein_coding MGP_BALBcJ_T0063439.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119317949 119341160 + Cnn3 protein_coding processed_transcript MGP_BALBcJ_T0063440.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119340585 119347866 + MGP_BALBcJ_P0063440 Cnn3 protein_coding protein_coding MGP_BALBcJ_T0063441.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119341689 119348077 + Cnn3 protein_coding retained_intron MGP_BALBcJ_T0063442.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119347806 119348667 + MGP_BALBcJ_P0063442 Cnn3 protein_coding protein_coding MGP_BALBcJ_T0063443.1 MGP_BALBcJ_G0027800.1 mouse_genomes_project 3 119347835 119348669 + MGP_BALBcJ_P0063443 Cnn3 protein_coding protein_coding MGP_BALBcJ_T0063270.1 MGP_BALBcJ_G0027768.1 mouse_genomes_project 3 108011906 108016796 - MGP_BALBcJ_P0063270 Prmt6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063271.1 MGP_BALBcJ_G0027768.1 mouse_genomes_project 3 108011909 108016791 - MGP_BALBcJ_P0063271 Prmt6 protein_coding protein_coding MGP_BALBcJ_T0063272.1 MGP_BALBcJ_G0027768.1 mouse_genomes_project 3 108014346 108016796 - MGP_BALBcJ_P0063272 Prmt6 protein_coding protein_coding MGP_BALBcJ_T0062154.1 MGP_BALBcJ_G0027519.1 mouse_genomes_project 3 91799191 91816521 + MGP_BALBcJ_P0062154 Tdrkh protein_coding protein_coding MGP_BALBcJ_T0062155.1 MGP_BALBcJ_G0027519.1 mouse_genomes_project 3 91799211 91811547 + MGP_BALBcJ_P0062155 Tdrkh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062156.1 MGP_BALBcJ_G0027519.1 mouse_genomes_project 3 91799228 91812300 + MGP_BALBcJ_P0062156 Tdrkh protein_coding protein_coding MGP_BALBcJ_T0062157.1 MGP_BALBcJ_G0027519.1 mouse_genomes_project 3 91808711 91817421 + MGP_BALBcJ_P0062157 Tdrkh protein_coding protein_coding MGP_BALBcJ_T0062158.1 MGP_BALBcJ_G0027519.1 mouse_genomes_project 3 91808711 91817408 + MGP_BALBcJ_P0062158 Tdrkh protein_coding protein_coding MGP_BALBcJ_T0014056.1 MGP_BALBcJ_G0012153.1 mouse_genomes_project 3 58995027 58997278 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061294.1 MGP_BALBcJ_G0027309.1 mouse_genomes_project 3 80946122 80954119 + MGP_BALBcJ_P0061294 Sfrp2 protein_coding protein_coding MGP_BALBcJ_T0061295.1 MGP_BALBcJ_G0027309.1 mouse_genomes_project 3 80946366 80949945 + Sfrp2 protein_coding processed_transcript MGP_BALBcJ_T0061296.1 MGP_BALBcJ_G0027309.1 mouse_genomes_project 3 80946654 80951953 + Sfrp2 protein_coding processed_transcript MGP_BALBcJ_T0061866.1 MGP_BALBcJ_G0027416.1 mouse_genomes_project 3 86741935 86889980 + MGP_BALBcJ_P0061866 Kcnn3 protein_coding protein_coding MGP_BALBcJ_T0061867.1 MGP_BALBcJ_G0027416.1 mouse_genomes_project 3 86884732 86897382 + Kcnn3 protein_coding retained_intron MGP_BALBcJ_T0013938.1 MGP_BALBcJ_G0012035.1 mouse_genomes_project 3 19360091 19360861 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063346.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114465193 114492604 + MGP_BALBcJ_P0063346 Sass6 protein_coding protein_coding MGP_BALBcJ_T0063347.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114465214 114476469 + Sass6 protein_coding processed_transcript MGP_BALBcJ_T0063348.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114465223 114501808 + MGP_BALBcJ_P0063348 Sass6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063349.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114465282 114499604 + MGP_BALBcJ_P0063349 Sass6 protein_coding protein_coding MGP_BALBcJ_T0063351.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114484330 114490253 + Sass6 protein_coding processed_transcript MGP_BALBcJ_T0063353.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114492460 114498356 + Sass6 protein_coding retained_intron MGP_BALBcJ_T0063354.1 MGP_BALBcJ_G0027784.1 mouse_genomes_project 3 114496738 114499922 + Sass6 protein_coding retained_intron MGP_BALBcJ_T0001183.1 MGP_BALBcJ_G0001108.1 mouse_genomes_project 3 48369954 48373155 + TEC TEC MGP_BALBcJ_T0098877.1 MGP_BALBcJ_G0036925.1 mouse_genomes_project 3 76693745 76694635 - Gm3513 sense_intronic sense_intronic MGP_BALBcJ_T0059998.1 MGP_BALBcJ_G0027032.1 mouse_genomes_project 3 6833329 6838170 + MGP_BALBcJ_P0059998 Fabp5 protein_coding protein_coding MGP_BALBcJ_T0059999.1 MGP_BALBcJ_G0027032.1 mouse_genomes_project 3 6833386 6837898 + Fabp5 protein_coding retained_intron MGP_BALBcJ_T0063368.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114619235 114681926 - MGP_BALBcJ_P0063368 Agl protein_coding protein_coding MGP_BALBcJ_T0063369.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114621728 114681182 - MGP_BALBcJ_P0063369 Agl protein_coding protein_coding MGP_BALBcJ_T0063370.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114622272 114654853 - MGP_BALBcJ_P0063370 Agl protein_coding protein_coding MGP_BALBcJ_T0063371.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114627280 114681802 - MGP_BALBcJ_P0063371 Agl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063372.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114633460 114681889 - MGP_BALBcJ_P0063372 Agl protein_coding protein_coding MGP_BALBcJ_T0063373.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114653615 114655353 - MGP_BALBcJ_P0063373 Agl protein_coding protein_coding MGP_BALBcJ_T0063374.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114664253 114681791 - Agl protein_coding retained_intron MGP_BALBcJ_T0063375.1 MGP_BALBcJ_G0027788.1 mouse_genomes_project 3 114665589 114681611 - MGP_BALBcJ_P0063375 Agl protein_coding protein_coding MGP_BALBcJ_T0064090.1 MGP_BALBcJ_G0027922.1 mouse_genomes_project 3 142689782 142725387 - MGP_BALBcJ_P0064090 protein_coding protein_coding MGP_BALBcJ_T0064092.1 MGP_BALBcJ_G0027922.1 mouse_genomes_project 3 142695846 142699226 - MGP_BALBcJ_P0064092 protein_coding protein_coding MGP_BALBcJ_T0064093.1 MGP_BALBcJ_G0027922.1 mouse_genomes_project 3 142696073 142704378 - MGP_BALBcJ_P0064093 protein_coding protein_coding MGP_BALBcJ_T0064094.1 MGP_BALBcJ_G0027922.1 mouse_genomes_project 3 142722886 142724445 - protein_coding retained_intron MGP_BALBcJ_T0098887.1 MGP_BALBcJ_G0036934.1 mouse_genomes_project 3 96822406 96826768 + Gm43024 sense_intronic sense_intronic MGP_BALBcJ_T0010511.1 MGP_BALBcJ_G0008636.1 mouse_genomes_project 3 86435967 86436050 - Mir92b miRNA miRNA MGP_BALBcJ_T0060857.1 MGP_BALBcJ_G0027201.1 mouse_genomes_project 3 54301443 54315915 + MGP_BALBcJ_P0060857 Tm4sf4 protein_coding protein_coding MGP_BALBcJ_T0099734.1 MGP_BALBcJ_G0037770.1 mouse_genomes_project 3 52214587 52214694 + Gm25132 snRNA snRNA MGP_BALBcJ_T0099727.1 MGP_BALBcJ_G0037763.1 mouse_genomes_project 3 36556500 36556660 + Gm23796 snRNA snRNA MGP_BALBcJ_T0004257.1 MGP_BALBcJ_G0003741.1 mouse_genomes_project 3 85880024 85884760 - Gm20652 antisense antisense MGP_BALBcJ_T0062526.1 MGP_BALBcJ_G0027592.1 mouse_genomes_project 3 94151117 94154802 + MGP_BALBcJ_P0062526 Gm16253 protein_coding protein_coding MGP_BALBcJ_T0060196.1 MGP_BALBcJ_G0027083.1 mouse_genomes_project 3 24182348 24189008 + MGP_BALBcJ_P0060196 Ghsr protein_coding protein_coding MGP_BALBcJ_T0001106.1 MGP_BALBcJ_G0001031.1 mouse_genomes_project 3 7131756 7132086 + TEC TEC MGP_BALBcJ_T0102470.1 MGP_BALBcJ_G0040286.1 mouse_genomes_project 3 78172766 78173234 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060083.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16078129 16106642 + MGP_BALBcJ_P0060083 Mtfr1 protein_coding protein_coding MGP_BALBcJ_T0060084.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16078131 16110661 + MGP_BALBcJ_P0060084 Mtfr1 protein_coding protein_coding MGP_BALBcJ_T0060085.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16078149 16110312 + MGP_BALBcJ_P0060085 Mtfr1 protein_coding protein_coding MGP_BALBcJ_T0060086.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16078912 16111754 + MGP_BALBcJ_P0060086 Mtfr1 protein_coding protein_coding MGP_BALBcJ_T0060087.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16079067 16110498 + MGP_BALBcJ_P0060087 Mtfr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060088.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16079076 16106651 + MGP_BALBcJ_P0060088 Mtfr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060089.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16079116 16102500 + MGP_BALBcJ_P0060089 Mtfr1 protein_coding protein_coding MGP_BALBcJ_T0060090.1 MGP_BALBcJ_G0027063.1 mouse_genomes_project 3 16102520 16107169 + Mtfr1 protein_coding retained_intron MGP_BALBcJ_T0011526.1 MGP_BALBcJ_G0009651.1 mouse_genomes_project 3 98418604 98418866 - Gm23465 misc_RNA misc_RNA MGP_BALBcJ_T0063292.1 MGP_BALBcJ_G0027772.1 mouse_genomes_project 3 112774356 112989829 + MGP_BALBcJ_P0063292 Olfm3 protein_coding protein_coding MGP_BALBcJ_T0063293.1 MGP_BALBcJ_G0027772.1 mouse_genomes_project 3 112774913 112985081 + MGP_BALBcJ_P0063293 Olfm3 protein_coding protein_coding MGP_BALBcJ_T0063294.1 MGP_BALBcJ_G0027772.1 mouse_genomes_project 3 112944886 112989363 + MGP_BALBcJ_P0063294 Olfm3 protein_coding protein_coding MGP_BALBcJ_T0014172.1 MGP_BALBcJ_G0012269.1 mouse_genomes_project 3 92985881 92986233 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011532.1 MGP_BALBcJ_G0009657.1 mouse_genomes_project 3 151639301 151639569 + Gm22136 misc_RNA misc_RNA MGP_BALBcJ_T0063390.1 MGP_BALBcJ_G0027793.1 mouse_genomes_project 3 115467596 115582052 + MGP_BALBcJ_P0063390 Plppr5 protein_coding protein_coding MGP_BALBcJ_T0063391.1 MGP_BALBcJ_G0027793.1 mouse_genomes_project 3 115467987 115582052 + MGP_BALBcJ_P0063391 Plppr5 protein_coding protein_coding MGP_BALBcJ_T0060391.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605487 30621287 + MGP_BALBcJ_P0060391 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060392.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605830 30606526 + Ttc14 protein_coding retained_intron MGP_BALBcJ_T0060393.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605838 30607085 + Ttc14 protein_coding retained_intron MGP_BALBcJ_T0060394.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605846 30613637 + MGP_BALBcJ_P0060394 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060395.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605846 30608527 + MGP_BALBcJ_P0060395 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060396.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605865 30613492 + MGP_BALBcJ_P0060396 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060397.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605868 30616104 + MGP_BALBcJ_P0060397 Ttc14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060398.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605868 30618718 + MGP_BALBcJ_P0060398 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060399.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605906 30616371 + MGP_BALBcJ_P0060399 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060400.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30605918 30613090 + MGP_BALBcJ_P0060400 Ttc14 protein_coding protein_coding MGP_BALBcJ_T0060401.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30606807 30613624 + MGP_BALBcJ_P0060401 Ttc14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060402.1 MGP_BALBcJ_G0027118.1 mouse_genomes_project 3 30608132 30608708 + Ttc14 protein_coding retained_intron MGP_BALBcJ_T0098587.1 MGP_BALBcJ_G0036641.1 mouse_genomes_project 3 22344538 22344646 + Gm22832 rRNA rRNA MGP_BALBcJ_T0062086.1 MGP_BALBcJ_G0027470.1 mouse_genomes_project 3 89754778 89756093 + MGP_BALBcJ_P0062086 Sprr2j-ps protein_coding protein_coding MGP_BALBcJ_T0001395.1 MGP_BALBcJ_G0001317.1 mouse_genomes_project 3 156095305 156097776 - TEC TEC MGP_BALBcJ_T0014246.1 MGP_BALBcJ_G0012343.1 mouse_genomes_project 3 111603476 111603734 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013923.1 MGP_BALBcJ_G0012020.1 mouse_genomes_project 3 15451581 15452783 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062223.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455560 92460979 + MGP_BALBcJ_P0062223 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062224.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455593 92463044 + MGP_BALBcJ_P0062224 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062225.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455593 92458012 + MGP_BALBcJ_P0062225 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062226.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455594 92457796 + MGP_BALBcJ_P0062226 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062227.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455620 92462832 + MGP_BALBcJ_P0062227 Rfx5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062228.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455645 92457186 + Rfx5 protein_coding processed_transcript MGP_BALBcJ_T0062229.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455645 92458631 + MGP_BALBcJ_P0062229 Rfx5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062230.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455655 92462832 + MGP_BALBcJ_P0062230 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062231.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455680 92457874 + MGP_BALBcJ_P0062231 Rfx5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062232.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455686 92462829 + Rfx5 protein_coding retained_intron MGP_BALBcJ_T0062233.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455711 92462832 + MGP_BALBcJ_P0062233 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062234.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455869 92458278 + MGP_BALBcJ_P0062234 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062235.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92455963 92457810 + MGP_BALBcJ_P0062235 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062236.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92456012 92457841 + MGP_BALBcJ_P0062236 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062237.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92456245 92461089 + MGP_BALBcJ_P0062237 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062238.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92456497 92463044 + MGP_BALBcJ_P0062238 Rfx5 protein_coding protein_coding MGP_BALBcJ_T0062239.1 MGP_BALBcJ_G0027533.1 mouse_genomes_project 3 92456953 92458285 + Rfx5 protein_coding retained_intron MGP_BALBcJ_T0001136.1 MGP_BALBcJ_G0001061.1 mouse_genomes_project 3 30857813 30858908 - TEC TEC MGP_BALBcJ_T0060136.1 MGP_BALBcJ_G0027071.1 mouse_genomes_project 3 16938816 16999554 + MGP_BALBcJ_P0060136 Hltf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060137.1 MGP_BALBcJ_G0027071.1 mouse_genomes_project 3 16938816 17000763 + MGP_BALBcJ_P0060137 Hltf protein_coding protein_coding MGP_BALBcJ_T0060138.1 MGP_BALBcJ_G0027071.1 mouse_genomes_project 3 16938825 16990589 + Hltf protein_coding retained_intron MGP_BALBcJ_T0060139.1 MGP_BALBcJ_G0027071.1 mouse_genomes_project 3 16938858 16946407 + Hltf protein_coding retained_intron MGP_BALBcJ_T0060140.1 MGP_BALBcJ_G0027071.1 mouse_genomes_project 3 16940498 17000749 + MGP_BALBcJ_P0060140 Hltf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060141.1 MGP_BALBcJ_G0027071.1 mouse_genomes_project 3 16990561 17000763 + Hltf protein_coding retained_intron MGP_BALBcJ_T0007678.1 MGP_BALBcJ_G0006276.1 mouse_genomes_project 3 128842714 128844069 - Gm43349 lincRNA lincRNA MGP_BALBcJ_T0010500.1 MGP_BALBcJ_G0008625.1 mouse_genomes_project 3 66072786 66072881 + Mir16-2 miRNA miRNA MGP_BALBcJ_T0099801.1 MGP_BALBcJ_G0037837.1 mouse_genomes_project 3 144342819 144342922 - Gm22078 snRNA snRNA MGP_BALBcJ_T0004247.1 MGP_BALBcJ_G0003736.1 mouse_genomes_project 3 80062036 80128054 + Rbm46os antisense antisense MGP_BALBcJ_T0004248.1 MGP_BALBcJ_G0003736.1 mouse_genomes_project 3 80062036 80126135 + Rbm46os antisense antisense MGP_BALBcJ_T0004249.1 MGP_BALBcJ_G0003736.1 mouse_genomes_project 3 80062077 80126170 + Rbm46os antisense antisense MGP_BALBcJ_T0004250.1 MGP_BALBcJ_G0003736.1 mouse_genomes_project 3 80089930 80128699 + Rbm46os antisense antisense MGP_BALBcJ_T0001217.1 MGP_BALBcJ_G0001140.1 mouse_genomes_project 3 54512027 54515982 - TEC TEC MGP_BALBcJ_T0014179.1 MGP_BALBcJ_G0012276.1 mouse_genomes_project 3 93993242 93993694 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004334.1 MGP_BALBcJ_G0003787.1 mouse_genomes_project 3 113990273 114004710 + Gm43109 antisense antisense MGP_BALBcJ_T0061804.1 MGP_BALBcJ_G0027403.1 mouse_genomes_project 3 86526456 86535531 - MGP_BALBcJ_P0061804 Efna3 protein_coding protein_coding MGP_BALBcJ_T0061805.1 MGP_BALBcJ_G0027403.1 mouse_genomes_project 3 86527921 86535453 - MGP_BALBcJ_P0061805 Efna3 protein_coding protein_coding MGP_BALBcJ_T0061806.1 MGP_BALBcJ_G0027403.1 mouse_genomes_project 3 86528416 86534197 - Efna3 protein_coding processed_transcript MGP_BALBcJ_T0060964.1 MGP_BALBcJ_G0027228.1 mouse_genomes_project 3 57944631 57950819 + MGP_BALBcJ_P0060964 P2ry1 protein_coding protein_coding MGP_BALBcJ_T0060965.1 MGP_BALBcJ_G0027228.1 mouse_genomes_project 3 57944631 57950816 + MGP_BALBcJ_P0060965 P2ry1 protein_coding protein_coding MGP_BALBcJ_T0060966.1 MGP_BALBcJ_G0027228.1 mouse_genomes_project 3 57944635 57946836 + MGP_BALBcJ_P0060966 P2ry1 protein_coding protein_coding MGP_BALBcJ_T0063856.1 MGP_BALBcJ_G0027877.1 mouse_genomes_project 3 133287401 133304273 - MGP_BALBcJ_P0063856 Cisd2 protein_coding protein_coding MGP_BALBcJ_T0063857.1 MGP_BALBcJ_G0027877.1 mouse_genomes_project 3 133290994 133303755 - MGP_BALBcJ_P0063857 Cisd2 protein_coding protein_coding MGP_BALBcJ_T0063858.1 MGP_BALBcJ_G0027877.1 mouse_genomes_project 3 133300299 133303752 - Cisd2 protein_coding retained_intron MGP_BALBcJ_T0063859.1 MGP_BALBcJ_G0027877.1 mouse_genomes_project 3 133301205 133303427 - Cisd2 protein_coding processed_transcript MGP_BALBcJ_T0007714.1 MGP_BALBcJ_G0006308.1 mouse_genomes_project 3 141439466 141440935 - Gm43616 lincRNA lincRNA MGP_BALBcJ_T0062112.1 MGP_BALBcJ_G0027493.1 mouse_genomes_project 3 90142321 90143922 - MGP_BALBcJ_P0062112 Lce1k protein_coding protein_coding MGP_BALBcJ_T0060358.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29548094 29560410 + MGP_BALBcJ_P0060358 Actl6a protein_coding protein_coding MGP_BALBcJ_T0060359.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29550303 29568770 + MGP_BALBcJ_P0060359 Actl6a protein_coding protein_coding MGP_BALBcJ_T0060360.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29550346 29551803 + Actl6a protein_coding retained_intron MGP_BALBcJ_T0060361.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29550561 29560404 + MGP_BALBcJ_P0060361 Actl6a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060362.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29550960 29560453 + MGP_BALBcJ_P0060362 Actl6a protein_coding protein_coding MGP_BALBcJ_T0060363.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29553179 29553967 + Actl6a protein_coding retained_intron MGP_BALBcJ_T0060364.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29553968 29568570 + MGP_BALBcJ_P0060364 Actl6a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060365.1 MGP_BALBcJ_G0027113.1 mouse_genomes_project 3 29560363 29568765 + Actl6a protein_coding retained_intron MGP_BALBcJ_T0063832.1 MGP_BALBcJ_G0027872.1 mouse_genomes_project 3 132702981 132808073 + MGP_BALBcJ_P0063832 Tacr3 protein_coding protein_coding MGP_BALBcJ_T0013971.1 MGP_BALBcJ_G0012068.1 mouse_genomes_project 3 34008514 34009338 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007572.1 MGP_BALBcJ_G0006197.1 mouse_genomes_project 3 82745746 82754822 - Gm42812 lincRNA lincRNA MGP_BALBcJ_T0007464.1 MGP_BALBcJ_G0006113.1 mouse_genomes_project 3 27381526 27382912 - lincRNA lincRNA MGP_BALBcJ_T0060981.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60169533 60255669 + MGP_BALBcJ_P0060981 Mme protein_coding protein_coding MGP_BALBcJ_T0060982.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60223111 60256038 + MGP_BALBcJ_P0060982 Mme protein_coding protein_coding MGP_BALBcJ_T0060983.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60223293 60256030 + MGP_BALBcJ_P0060983 Mme protein_coding protein_coding MGP_BALBcJ_T0060984.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60223406 60311182 + MGP_BALBcJ_P0060984 Mme protein_coding protein_coding MGP_BALBcJ_T0060985.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60223717 60316489 + MGP_BALBcJ_P0060985 Mme protein_coding protein_coding MGP_BALBcJ_T0060986.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60223940 60311709 + MGP_BALBcJ_P0060986 Mme protein_coding protein_coding MGP_BALBcJ_T0060987.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60224897 60255910 + MGP_BALBcJ_P0060987 Mme protein_coding protein_coding MGP_BALBcJ_T0060988.1 MGP_BALBcJ_G0027234.1 mouse_genomes_project 3 60228005 60272361 + Mme protein_coding retained_intron MGP_BALBcJ_T0062099.1 MGP_BALBcJ_G0027481.1 mouse_genomes_project 3 89982740 89984470 - MGP_BALBcJ_P0062099 Lce1a1 protein_coding protein_coding MGP_BALBcJ_T0001300.1 MGP_BALBcJ_G0001223.1 mouse_genomes_project 3 119613775 119615583 - TEC TEC MGP_BALBcJ_T0010533.1 MGP_BALBcJ_G0008658.1 mouse_genomes_project 3 125447976 125448050 + Mir302b miRNA miRNA MGP_BALBcJ_T0007711.1 MGP_BALBcJ_G0006305.1 mouse_genomes_project 3 141184213 141185846 + Gm43613 lincRNA lincRNA MGP_BALBcJ_T0060823.1 MGP_BALBcJ_G0027195.1 mouse_genomes_project 3 52095215 52120451 + MGP_BALBcJ_P0060823 Sohlh2 protein_coding protein_coding MGP_BALBcJ_T0013930.1 MGP_BALBcJ_G0012027.1 mouse_genomes_project 3 17270170 17271143 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099761.1 MGP_BALBcJ_G0037797.1 mouse_genomes_project 3 86410196 86410303 - Gm23269 snRNA snRNA MGP_BALBcJ_T0007663.1 MGP_BALBcJ_G0006263.1 mouse_genomes_project 3 122704714 122802268 + Gm42825 lincRNA lincRNA MGP_BALBcJ_T0063860.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133318465 133345540 + MGP_BALBcJ_P0063860 Ube2d3 protein_coding protein_coding MGP_BALBcJ_T0063861.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133318632 133345589 + MGP_BALBcJ_P0063861 Ube2d3 protein_coding protein_coding MGP_BALBcJ_T0063862.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133318845 133321914 + Ube2d3 protein_coding processed_transcript MGP_BALBcJ_T0063863.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133318849 133340298 + MGP_BALBcJ_P0063863 Ube2d3 protein_coding protein_coding MGP_BALBcJ_T0063864.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133318859 133343344 + MGP_BALBcJ_P0063864 Ube2d3 protein_coding protein_coding MGP_BALBcJ_T0063865.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133318881 133348325 + MGP_BALBcJ_P0063865 Ube2d3 protein_coding protein_coding MGP_BALBcJ_T0063866.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133319063 133335552 + MGP_BALBcJ_P0063866 Ube2d3 protein_coding protein_coding MGP_BALBcJ_T0063867.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133319070 133345600 + MGP_BALBcJ_P0063867 Ube2d3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063868.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133319180 133338466 + Ube2d3 protein_coding retained_intron MGP_BALBcJ_T0063869.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133334928 133340342 + Ube2d3 protein_coding retained_intron MGP_BALBcJ_T0063870.1 MGP_BALBcJ_G0027878.1 mouse_genomes_project 3 133338950 133340989 + Ube2d3 protein_coding retained_intron MGP_BALBcJ_T0061310.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81343822 81489437 - MGP_BALBcJ_P0061310 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061311.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81343823 81444101 - MGP_BALBcJ_P0061311 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061312.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81343824 81405116 - MGP_BALBcJ_P0061312 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061313.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81345257 81405104 - MGP_BALBcJ_P0061313 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061314.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81346723 81397067 - MGP_BALBcJ_P0061314 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061315.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81347081 81405072 - Trim2 protein_coding retained_intron MGP_BALBcJ_T0061316.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81347096 81455143 - MGP_BALBcJ_P0061316 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061318.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81360626 81374183 - Trim2 protein_coding retained_intron MGP_BALBcJ_T0061319.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81372049 81405101 - Trim2 protein_coding retained_intron MGP_BALBcJ_T0061320.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81374321 81375208 - Trim2 protein_coding processed_transcript MGP_BALBcJ_T0061321.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81375863 81490025 - MGP_BALBcJ_P0061321 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061322.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81375874 81490074 - MGP_BALBcJ_P0061322 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061323.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81377024 81443658 - MGP_BALBcJ_P0061323 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061324.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81390274 81405088 - Trim2 protein_coding retained_intron MGP_BALBcJ_T0061325.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81391571 81405101 - Trim2 protein_coding retained_intron MGP_BALBcJ_T0061326.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81392173 81405101 - MGP_BALBcJ_P0061326 Trim2 protein_coding protein_coding MGP_BALBcJ_T0061327.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81441972 81443658 - Trim2 protein_coding processed_transcript MGP_BALBcJ_T0061328.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81484589 81489369 - Trim2 protein_coding processed_transcript MGP_BALBcJ_T0061329.1 MGP_BALBcJ_G0027313.1 mouse_genomes_project 3 81489473 81491505 - Trim2 protein_coding processed_transcript MGP_BALBcJ_T0004312.1 MGP_BALBcJ_G0003778.1 mouse_genomes_project 3 103740061 103757984 + Gm42722 antisense antisense MGP_BALBcJ_T0001254.1 MGP_BALBcJ_G0001177.1 mouse_genomes_project 3 87555687 87561186 + TEC TEC MGP_BALBcJ_T0060024.1 MGP_BALBcJ_G0027042.1 mouse_genomes_project 3 7193916 7222173 + MGP_BALBcJ_P0060024 Chmp4c protein_coding protein_coding MGP_BALBcJ_T0060025.1 MGP_BALBcJ_G0027042.1 mouse_genomes_project 3 7193967 7256731 + MGP_BALBcJ_P0060025 Chmp4c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102459.1 MGP_BALBcJ_G0040275.1 mouse_genomes_project 3 56470589 56494546 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0062492.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93706314 93716213 + Mtmr11 protein_coding retained_intron MGP_BALBcJ_T0062493.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93706314 93716214 + MGP_BALBcJ_P0062493 Mtmr11 protein_coding protein_coding MGP_BALBcJ_T0062494.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93706395 93716214 + MGP_BALBcJ_P0062494 Mtmr11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062495.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93706476 93707687 + Mtmr11 protein_coding retained_intron MGP_BALBcJ_T0062496.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93706892 93716214 + Mtmr11 protein_coding processed_transcript MGP_BALBcJ_T0062497.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93713369 93714488 + Mtmr11 protein_coding processed_transcript MGP_BALBcJ_T0062498.1 MGP_BALBcJ_G0027576.1 mouse_genomes_project 3 93715081 93715966 + Mtmr11 protein_coding processed_transcript MGP_BALBcJ_T0063453.1 MGP_BALBcJ_G0027804.1 mouse_genomes_project 3 119646605 119706157 - MGP_BALBcJ_P0063453 Abcd3 protein_coding protein_coding MGP_BALBcJ_T0063454.1 MGP_BALBcJ_G0027804.1 mouse_genomes_project 3 119646738 119706293 - MGP_BALBcJ_P0063454 Abcd3 protein_coding protein_coding MGP_BALBcJ_T0063455.1 MGP_BALBcJ_G0027804.1 mouse_genomes_project 3 119647587 119706157 - MGP_BALBcJ_P0063455 Abcd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063456.1 MGP_BALBcJ_G0027804.1 mouse_genomes_project 3 119654486 119656973 - Abcd3 protein_coding retained_intron MGP_BALBcJ_T0063457.1 MGP_BALBcJ_G0027804.1 mouse_genomes_project 3 119674136 119705900 - Abcd3 protein_coding processed_transcript MGP_BALBcJ_T0063458.1 MGP_BALBcJ_G0027804.1 mouse_genomes_project 3 119687045 119706188 - Abcd3 protein_coding retained_intron MGP_BALBcJ_T0013953.1 MGP_BALBcJ_G0012050.1 mouse_genomes_project 3 29093077 29093849 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011512.1 MGP_BALBcJ_G0009637.1 mouse_genomes_project 3 21572699 21572965 + Gm24062 misc_RNA misc_RNA MGP_BALBcJ_T0004204.1 MGP_BALBcJ_G0003703.1 mouse_genomes_project 3 32817238 32826903 + Gm15952 antisense antisense MGP_BALBcJ_T0004205.1 MGP_BALBcJ_G0003703.1 mouse_genomes_project 3 32817238 32877377 + Gm15952 antisense antisense MGP_BALBcJ_T0004206.1 MGP_BALBcJ_G0003703.1 mouse_genomes_project 3 32817250 32822242 + Gm15952 antisense antisense MGP_BALBcJ_T0063130.1 MGP_BALBcJ_G0027738.1 mouse_genomes_project 3 105868354 105907160 - MGP_BALBcJ_P0063130 Gnai3 protein_coding protein_coding MGP_BALBcJ_T0014359.1 MGP_BALBcJ_G0012456.1 mouse_genomes_project 3 152169032 152169483 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011517.1 MGP_BALBcJ_G0009642.1 mouse_genomes_project 3 40749076 40749372 + Gm25714 misc_RNA misc_RNA MGP_BALBcJ_T0001362.1 MGP_BALBcJ_G0001284.1 mouse_genomes_project 3 134650151 134651154 - TEC TEC MGP_BALBcJ_T0017939.1 MGP_BALBcJ_G0015453.1 mouse_genomes_project 3 101516679 101522047 + Gm15471 processed_transcript retained_intron MGP_BALBcJ_T0017940.1 MGP_BALBcJ_G0015453.1 mouse_genomes_project 3 101516686 101522048 + Gm15471 processed_transcript antisense MGP_BALBcJ_T0013895.1 MGP_BALBcJ_G0011992.1 mouse_genomes_project 3 7568446 7568957 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064042.1 MGP_BALBcJ_G0027914.1 mouse_genomes_project 3 140460823 140489325 + MGP_BALBcJ_P0064042 Gbp2 protein_coding protein_coding MGP_BALBcJ_T0064043.1 MGP_BALBcJ_G0027914.1 mouse_genomes_project 3 140460856 140481903 + MGP_BALBcJ_P0064043 Gbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062149.1 MGP_BALBcJ_G0027517.1 mouse_genomes_project 3 91758691 91783898 + MGP_BALBcJ_P0062149 Rorc protein_coding protein_coding MGP_BALBcJ_T0062150.1 MGP_BALBcJ_G0027517.1 mouse_genomes_project 3 91763326 91784334 + MGP_BALBcJ_P0062150 Rorc protein_coding protein_coding MGP_BALBcJ_T0062151.1 MGP_BALBcJ_G0027517.1 mouse_genomes_project 3 91763354 91783704 + Rorc protein_coding retained_intron MGP_BALBcJ_T0062152.1 MGP_BALBcJ_G0027517.1 mouse_genomes_project 3 91763410 91783706 + MGP_BALBcJ_P0062152 Rorc protein_coding protein_coding MGP_BALBcJ_T0007696.1 MGP_BALBcJ_G0006293.1 mouse_genomes_project 3 135646763 135654987 - Gm31678 lincRNA lincRNA MGP_BALBcJ_T0011795.1 MGP_BALBcJ_G0009909.1 mouse_genomes_project 3 89707509 89708823 + MGP_BALBcJ_P0011795 Sprr2g polymorphic_pseudogene protein_coding MGP_BALBcJ_T0099775.1 MGP_BALBcJ_G0037811.1 mouse_genomes_project 3 94741340 94741450 - Gm24435 snRNA snRNA MGP_BALBcJ_T0014041.1 MGP_BALBcJ_G0012138.1 mouse_genomes_project 3 55272365 55272782 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001375.1 MGP_BALBcJ_G0001297.1 mouse_genomes_project 3 150280009 150282778 - TEC TEC MGP_BALBcJ_T0014003.1 MGP_BALBcJ_G0012100.1 mouse_genomes_project 3 44154630 44155096 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099752.1 MGP_BALBcJ_G0037788.1 mouse_genomes_project 3 83164929 83164991 - Gm24501 snRNA snRNA MGP_BALBcJ_T0014024.1 MGP_BALBcJ_G0012121.1 mouse_genomes_project 3 50293998 50294431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004359.1 MGP_BALBcJ_G0003807.1 mouse_genomes_project 3 129230365 129246155 + 4930534D22Rik antisense antisense MGP_BALBcJ_T0014281.1 MGP_BALBcJ_G0012378.1 mouse_genomes_project 3 122901010 122902022 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001142.1 MGP_BALBcJ_G0001067.1 mouse_genomes_project 3 32839617 32842729 - TEC TEC MGP_BALBcJ_T0007751.1 MGP_BALBcJ_G0006335.1 mouse_genomes_project 3 149918527 149926315 + Gm43617 lincRNA lincRNA MGP_BALBcJ_T0007669.1 MGP_BALBcJ_G0006269.1 mouse_genomes_project 3 126602733 126604751 - 4933424H11Rik lincRNA lincRNA MGP_BALBcJ_T0061393.1 MGP_BALBcJ_G0027332.1 mouse_genomes_project 3 84291434 84388815 - MGP_BALBcJ_P0061393 Kirrel protein_coding protein_coding MGP_BALBcJ_T0061394.1 MGP_BALBcJ_G0027332.1 mouse_genomes_project 3 84291442 84388862 - MGP_BALBcJ_P0061394 Kirrel protein_coding protein_coding MGP_BALBcJ_T0061395.1 MGP_BALBcJ_G0027332.1 mouse_genomes_project 3 84297492 84388665 - MGP_BALBcJ_P0061395 Kirrel protein_coding protein_coding MGP_BALBcJ_T0061913.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87231056 87283329 - MGP_BALBcJ_P0061913 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061914.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87231056 87283319 - MGP_BALBcJ_P0061914 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061915.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87231204 87283339 - MGP_BALBcJ_P0061915 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061916.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87231209 87283326 - MGP_BALBcJ_P0061916 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061917.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87231725 87234202 - MGP_BALBcJ_P0061917 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061918.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87233311 87234699 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061919.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87236906 87283316 - MGP_BALBcJ_P0061919 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061920.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87237131 87252187 - MGP_BALBcJ_P0061920 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061921.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87237132 87283379 - MGP_BALBcJ_P0061921 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061922.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87237132 87283336 - MGP_BALBcJ_P0061922 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061923.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87245108 87247200 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061924.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87245281 87251484 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061925.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87245925 87283195 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061926.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87247046 87248527 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061927.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87247458 87249391 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061928.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87251140 87258325 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061929.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87252925 87254317 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061930.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87267348 87269744 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061931.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87269867 87282946 - MGP_BALBcJ_P0061931 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061932.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87272683 87283366 - Ubap2l protein_coding retained_intron MGP_BALBcJ_T0061933.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87274623 87283492 - MGP_BALBcJ_P0061933 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061934.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87274693 87283302 - MGP_BALBcJ_P0061934 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0061935.1 MGP_BALBcJ_G0027424.1 mouse_genomes_project 3 87275757 87279173 - MGP_BALBcJ_P0061935 Ubap2l protein_coding protein_coding MGP_BALBcJ_T0101091.1 MGP_BALBcJ_G0039127.1 mouse_genomes_project 3 151938934 151939014 - Snord45c snoRNA snoRNA MGP_BALBcJ_T0001370.1 MGP_BALBcJ_G0001292.1 mouse_genomes_project 3 146537621 146538161 + TEC TEC MGP_BALBcJ_T0004196.1 MGP_BALBcJ_G0003697.1 mouse_genomes_project 3 28122163 28153692 + Gm15496 antisense antisense MGP_BALBcJ_T0004197.1 MGP_BALBcJ_G0003697.1 mouse_genomes_project 3 28147726 28151809 + Gm15496 antisense antisense MGP_BALBcJ_T0061009.1 MGP_BALBcJ_G0027239.1 mouse_genomes_project 3 61023938 61048017 + MGP_BALBcJ_P0061009 Vmn2r1 protein_coding protein_coding MGP_BALBcJ_T0014287.1 MGP_BALBcJ_G0012384.1 mouse_genomes_project 3 126856031 126857351 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063960.1 MGP_BALBcJ_G0027897.1 mouse_genomes_project 3 136112335 136131607 + Adh1 protein_coding processed_transcript MGP_BALBcJ_T0063961.1 MGP_BALBcJ_G0027897.1 mouse_genomes_project 3 136126429 136139957 + MGP_BALBcJ_P0063961 Adh1 protein_coding protein_coding MGP_BALBcJ_T0063962.1 MGP_BALBcJ_G0027897.1 mouse_genomes_project 3 136126580 136129771 + Adh1 protein_coding retained_intron MGP_BALBcJ_T0063963.1 MGP_BALBcJ_G0027897.1 mouse_genomes_project 3 136126586 136139957 + MGP_BALBcJ_P0063963 Adh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062218.1 MGP_BALBcJ_G0027532.1 mouse_genomes_project 3 92342403 92345273 - MGP_BALBcJ_P0062218 Psmb4 protein_coding protein_coding MGP_BALBcJ_T0062219.1 MGP_BALBcJ_G0027532.1 mouse_genomes_project 3 92342632 92343154 - Psmb4 protein_coding retained_intron MGP_BALBcJ_T0062220.1 MGP_BALBcJ_G0027532.1 mouse_genomes_project 3 92343208 92345174 - Psmb4 protein_coding retained_intron MGP_BALBcJ_T0062221.1 MGP_BALBcJ_G0027532.1 mouse_genomes_project 3 92343227 92345057 - Psmb4 protein_coding retained_intron MGP_BALBcJ_T0062222.1 MGP_BALBcJ_G0027532.1 mouse_genomes_project 3 92343617 92344266 - Psmb4 protein_coding retained_intron MGP_BALBcJ_T0013914.1 MGP_BALBcJ_G0012011.1 mouse_genomes_project 3 12821754 12822815 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007480.1 MGP_BALBcJ_G0006127.1 mouse_genomes_project 3 33404946 33413512 - Gm11548 lincRNA lincRNA MGP_BALBcJ_T0014013.1 MGP_BALBcJ_G0012110.1 mouse_genomes_project 3 47100359 47100591 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014115.1 MGP_BALBcJ_G0012212.1 mouse_genomes_project 3 75895575 75896420 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062552.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277107 94286923 + MGP_BALBcJ_P0062552 Pias3 protein_coding protein_coding MGP_BALBcJ_T0062553.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277165 94286435 + MGP_BALBcJ_P0062553 Pias3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062554.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277799 94280413 + MGP_BALBcJ_P0062554 Pias3 protein_coding protein_coding MGP_BALBcJ_T0062555.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277806 94287031 + MGP_BALBcJ_P0062555 Pias3 protein_coding protein_coding MGP_BALBcJ_T0062556.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277840 94286934 + MGP_BALBcJ_P0062556 Pias3 protein_coding protein_coding MGP_BALBcJ_T0062557.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277856 94280704 + Pias3 protein_coding retained_intron MGP_BALBcJ_T0062558.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94277917 94282412 + MGP_BALBcJ_P0062558 Pias3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062559.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94281198 94284782 + Pias3 protein_coding retained_intron MGP_BALBcJ_T0062560.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94282073 94284847 + Pias3 protein_coding retained_intron MGP_BALBcJ_T0062561.1 MGP_BALBcJ_G0027601.1 mouse_genomes_project 3 94285126 94286094 + MGP_BALBcJ_P0062561 Pias3 protein_coding protein_coding MGP_BALBcJ_T0001129.1 MGP_BALBcJ_G0001054.1 mouse_genomes_project 3 28791867 28795785 + TEC TEC MGP_BALBcJ_T0101057.1 MGP_BALBcJ_G0039093.1 mouse_genomes_project 3 87366402 87366534 + Gm23723 snoRNA snoRNA MGP_BALBcJ_T0060001.1 MGP_BALBcJ_G0027034.1 mouse_genomes_project 3 7002204 7019935 - MGP_BALBcJ_P0060001 Gm37389 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102478.1 MGP_BALBcJ_G0040294.1 mouse_genomes_project 3 88259514 88266629 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101072.1 MGP_BALBcJ_G0039108.1 mouse_genomes_project 3 114336742 114336839 + Gm26358 snoRNA snoRNA MGP_BALBcJ_T0063358.1 MGP_BALBcJ_G0027786.1 mouse_genomes_project 3 114512764 114553163 - MGP_BALBcJ_P0063358 Gm43191 protein_coding protein_coding MGP_BALBcJ_T0014154.1 MGP_BALBcJ_G0012251.1 mouse_genomes_project 3 89810461 89810765 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101678.1 MGP_BALBcJ_G0039669.1 mouse_genomes_project 3 18584161 18632343 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101679.1 MGP_BALBcJ_G0039669.1 mouse_genomes_project 3 18584240 18594357 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101680.1 MGP_BALBcJ_G0039669.1 mouse_genomes_project 3 18584430 18584595 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0010513.1 MGP_BALBcJ_G0008638.1 mouse_genomes_project 3 87308308 87308388 + Mir190b miRNA miRNA MGP_BALBcJ_T0060846.1 MGP_BALBcJ_G0027199.1 mouse_genomes_project 3 52688667 52691159 + MGP_BALBcJ_P0060846 Mab21l1 protein_coding protein_coding MGP_BALBcJ_T0062140.1 MGP_BALBcJ_G0027512.1 mouse_genomes_project 3 90974640 90975448 - MGP_BALBcJ_P0062140 protein_coding protein_coding MGP_BALBcJ_T0001232.1 MGP_BALBcJ_G0001155.1 mouse_genomes_project 3 64544733 64546573 + TEC TEC MGP_BALBcJ_T0007735.1 MGP_BALBcJ_G0006326.1 mouse_genomes_project 3 145571857 145587986 - Gm36888 lincRNA lincRNA MGP_BALBcJ_T0014027.1 MGP_BALBcJ_G0012124.1 mouse_genomes_project 3 50926516 50926924 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011531.1 MGP_BALBcJ_G0009656.1 mouse_genomes_project 3 124028777 124029045 - Gm26275 misc_RNA misc_RNA MGP_BALBcJ_T0011523.1 MGP_BALBcJ_G0009648.1 mouse_genomes_project 3 80812691 80812989 - Gm22342 misc_RNA misc_RNA MGP_BALBcJ_T0064395.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152628872 152658751 + MGP_BALBcJ_P0064395 Cryz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064396.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152628872 152658751 + MGP_BALBcJ_P0064396 Cryz protein_coding protein_coding MGP_BALBcJ_T0064397.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152628872 152658749 + MGP_BALBcJ_P0064397 Cryz protein_coding protein_coding MGP_BALBcJ_T0064398.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152629305 152657736 + MGP_BALBcJ_P0064398 Cryz protein_coding protein_coding MGP_BALBcJ_T0064399.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152629358 152647044 + MGP_BALBcJ_P0064399 Cryz protein_coding protein_coding MGP_BALBcJ_T0064400.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152629383 152654172 + MGP_BALBcJ_P0064400 Cryz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064401.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152629518 152646926 + MGP_BALBcJ_P0064401 Cryz protein_coding protein_coding MGP_BALBcJ_T0064402.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152629568 152649338 + MGP_BALBcJ_P0064402 Cryz protein_coding protein_coding MGP_BALBcJ_T0064403.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152629604 152654072 + MGP_BALBcJ_P0064403 Cryz protein_coding protein_coding MGP_BALBcJ_T0064404.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152641523 152657739 + MGP_BALBcJ_P0064404 Cryz protein_coding protein_coding MGP_BALBcJ_T0064405.1 MGP_BALBcJ_G0027975.1 mouse_genomes_project 3 152651371 152654933 + Cryz protein_coding retained_intron MGP_BALBcJ_T0064443.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156000517 156068800 + MGP_BALBcJ_P0064443 Ankrd13c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064444.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156000692 156067374 + MGP_BALBcJ_P0064444 Ankrd13c protein_coding protein_coding MGP_BALBcJ_T0064445.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156000692 156069407 + MGP_BALBcJ_P0064445 Ankrd13c protein_coding protein_coding MGP_BALBcJ_T0064446.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156000744 156068216 + Ankrd13c protein_coding retained_intron MGP_BALBcJ_T0064447.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156050001 156056213 + Ankrd13c protein_coding retained_intron MGP_BALBcJ_T0064448.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156053191 156065463 + Ankrd13c protein_coding retained_intron MGP_BALBcJ_T0064449.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156055103 156062584 + Ankrd13c protein_coding processed_transcript MGP_BALBcJ_T0064450.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156055681 156062554 + Ankrd13c protein_coding retained_intron MGP_BALBcJ_T0064451.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156059989 156064561 + Ankrd13c protein_coding retained_intron MGP_BALBcJ_T0064452.1 MGP_BALBcJ_G0027984.1 mouse_genomes_project 3 156060862 156062600 + Ankrd13c protein_coding retained_intron MGP_BALBcJ_T0062585.1 MGP_BALBcJ_G0027607.1 mouse_genomes_project 3 94460345 94499335 - MGP_BALBcJ_P0062585 Gpr89 protein_coding protein_coding MGP_BALBcJ_T0062586.1 MGP_BALBcJ_G0027607.1 mouse_genomes_project 3 94460655 94486621 - Gpr89 protein_coding processed_transcript MGP_BALBcJ_T0062587.1 MGP_BALBcJ_G0027607.1 mouse_genomes_project 3 94463550 94469906 - Gpr89 protein_coding retained_intron MGP_BALBcJ_T0062588.1 MGP_BALBcJ_G0027607.1 mouse_genomes_project 3 94474311 94492538 - Gpr89 protein_coding processed_transcript MGP_BALBcJ_T0062589.1 MGP_BALBcJ_G0027607.1 mouse_genomes_project 3 94476216 94491427 - Gpr89 protein_coding processed_transcript MGP_BALBcJ_T0062590.1 MGP_BALBcJ_G0027607.1 mouse_genomes_project 3 94476216 94499301 - MGP_BALBcJ_P0062590 Gpr89 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004227.1 MGP_BALBcJ_G0003720.1 mouse_genomes_project 3 52286797 52312458 - Gm42609 antisense antisense MGP_BALBcJ_T0004228.1 MGP_BALBcJ_G0003720.1 mouse_genomes_project 3 52289610 52310360 - Gm42609 antisense antisense MGP_BALBcJ_T0014102.1 MGP_BALBcJ_G0012199.1 mouse_genomes_project 3 71471592 71472058 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099783.1 MGP_BALBcJ_G0037819.1 mouse_genomes_project 3 107645935 107646041 + Gm25681 snRNA snRNA MGP_BALBcJ_T0001353.1 MGP_BALBcJ_G0001275.1 mouse_genomes_project 3 130887329 130889091 - TEC TEC MGP_BALBcJ_T0101092.1 MGP_BALBcJ_G0039128.1 mouse_genomes_project 3 155257512 155257644 + Gm24373 snoRNA snoRNA MGP_BALBcJ_T0010547.1 MGP_BALBcJ_G0008672.1 mouse_genomes_project 3 144354014 144354088 - Gm22901 miRNA miRNA MGP_BALBcJ_T0061827.1 MGP_BALBcJ_G0027407.1 mouse_genomes_project 3 86578964 86584740 + MGP_BALBcJ_P0061827 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0007520.1 MGP_BALBcJ_G0006155.1 mouse_genomes_project 3 49699205 49708912 - Gm30292 lincRNA lincRNA MGP_BALBcJ_T0101019.1 MGP_BALBcJ_G0039055.1 mouse_genomes_project 3 11111375 11111500 - Gm23112 snoRNA snoRNA MGP_BALBcJ_T0099748.1 MGP_BALBcJ_G0037784.1 mouse_genomes_project 3 76334031 76334135 + Gm24150 snRNA snRNA MGP_BALBcJ_T0062538.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94212373 94222363 + Pex11b protein_coding processed_transcript MGP_BALBcJ_T0062539.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94212427 94222363 + MGP_BALBcJ_P0062539 Pex11b protein_coding protein_coding MGP_BALBcJ_T0062541.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94212497 94221030 + MGP_BALBcJ_P0062541 Pex11b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062542.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94212650 94213951 + Pex11b protein_coding retained_intron MGP_BALBcJ_T0062543.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94212669 94221723 + MGP_BALBcJ_P0062543 Pex11b protein_coding protein_coding MGP_BALBcJ_T0062544.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94212830 94221723 + MGP_BALBcJ_P0062544 Pex11b protein_coding protein_coding MGP_BALBcJ_T0062545.1 MGP_BALBcJ_G0027597.1 mouse_genomes_project 3 94214050 94220797 + Pex11b protein_coding retained_intron MGP_BALBcJ_T0007595.1 MGP_BALBcJ_G0006208.1 mouse_genomes_project 3 90638561 90797194 - lincRNA lincRNA MGP_BALBcJ_T0060616.1 MGP_BALBcJ_G0027157.1 mouse_genomes_project 3 37886948 37903877 - MGP_BALBcJ_P0060616 Pgrmc2 protein_coding protein_coding MGP_BALBcJ_T0060617.1 MGP_BALBcJ_G0027157.1 mouse_genomes_project 3 37889142 37891293 - Pgrmc2 protein_coding retained_intron MGP_BALBcJ_T0001294.1 MGP_BALBcJ_G0001217.1 mouse_genomes_project 3 116769041 116771275 + TEC TEC MGP_BALBcJ_T0062097.1 MGP_BALBcJ_G0027480.1 mouse_genomes_project 3 89959147 89960717 - MGP_BALBcJ_P0062097 Lce6a protein_coding protein_coding MGP_BALBcJ_T0062098.1 MGP_BALBcJ_G0027480.1 mouse_genomes_project 3 89959151 89960237 - MGP_BALBcJ_P0062098 Lce6a protein_coding protein_coding MGP_BALBcJ_T0061573.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85694806 85713655 - MGP_BALBcJ_P0061573 Sema4a protein_coding protein_coding MGP_BALBcJ_T0061574.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85694809 85699982 - Sema4a protein_coding retained_intron MGP_BALBcJ_T0061575.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85694809 85707473 - Sema4a protein_coding retained_intron MGP_BALBcJ_T0061576.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85694809 85708877 - Sema4a protein_coding retained_intron MGP_BALBcJ_T0061577.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85708528 85710289 - MGP_BALBcJ_P0061577 Sema4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061578.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85708666 85710624 - Sema4a protein_coding retained_intron MGP_BALBcJ_T0061579.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85708873 85714152 - MGP_BALBcJ_P0061579 Sema4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061580.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85708935 85717939 - MGP_BALBcJ_P0061580 Sema4a protein_coding protein_coding MGP_BALBcJ_T0061581.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85709406 85717868 - MGP_BALBcJ_P0061581 Sema4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061582.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85709423 85717714 - MGP_BALBcJ_P0061582 Sema4a protein_coding protein_coding MGP_BALBcJ_T0061583.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85710881 85714143 - MGP_BALBcJ_P0061583 Sema4a protein_coding protein_coding MGP_BALBcJ_T0061584.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85711668 85713680 - Sema4a protein_coding retained_intron MGP_BALBcJ_T0061585.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85711926 85715253 - MGP_BALBcJ_P0061585 Sema4a protein_coding protein_coding MGP_BALBcJ_T0061586.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85713602 85715274 - MGP_BALBcJ_P0061586 Sema4a protein_coding protein_coding MGP_BALBcJ_T0061587.1 MGP_BALBcJ_G0027370.1 mouse_genomes_project 3 85714562 85715274 - Sema4a protein_coding processed_transcript MGP_BALBcJ_T0101039.1 MGP_BALBcJ_G0039075.1 mouse_genomes_project 3 61977242 61977368 - Gm25222 snoRNA snoRNA MGP_BALBcJ_T0062520.1 MGP_BALBcJ_G0027591.1 mouse_genomes_project 3 94132132 94136055 + MGP_BALBcJ_P0062520 Txnip protein_coding protein_coding MGP_BALBcJ_T0062521.1 MGP_BALBcJ_G0027591.1 mouse_genomes_project 3 94132135 94136029 + MGP_BALBcJ_P0062521 Txnip protein_coding protein_coding MGP_BALBcJ_T0062522.1 MGP_BALBcJ_G0027591.1 mouse_genomes_project 3 94133673 94134189 + Txnip protein_coding retained_intron MGP_BALBcJ_T0062523.1 MGP_BALBcJ_G0027591.1 mouse_genomes_project 3 94133686 94134380 + Txnip protein_coding processed_transcript MGP_BALBcJ_T0062524.1 MGP_BALBcJ_G0027591.1 mouse_genomes_project 3 94133898 94136030 + Txnip protein_coding processed_transcript MGP_BALBcJ_T0062525.1 MGP_BALBcJ_G0027591.1 mouse_genomes_project 3 94134229 94134738 + Txnip protein_coding retained_intron MGP_BALBcJ_T0061569.1 MGP_BALBcJ_G0027369.1 mouse_genomes_project 3 85664456 85679067 - MGP_BALBcJ_P0061569 Slc25a44 protein_coding protein_coding MGP_BALBcJ_T0061570.1 MGP_BALBcJ_G0027369.1 mouse_genomes_project 3 85664456 85679068 - MGP_BALBcJ_P0061570 Slc25a44 protein_coding protein_coding MGP_BALBcJ_T0061571.1 MGP_BALBcJ_G0027369.1 mouse_genomes_project 3 85664457 85679099 - MGP_BALBcJ_P0061571 Slc25a44 protein_coding protein_coding MGP_BALBcJ_T0061572.1 MGP_BALBcJ_G0027369.1 mouse_genomes_project 3 85664457 85679072 - MGP_BALBcJ_P0061572 Slc25a44 protein_coding protein_coding MGP_BALBcJ_T0007656.1 MGP_BALBcJ_G0006258.1 mouse_genomes_project 3 119593888 119602453 - Gm43608 lincRNA lincRNA MGP_BALBcJ_T0064097.1 MGP_BALBcJ_G0027926.1 mouse_genomes_project 3 142823657 142861076 - MGP_BALBcJ_P0064097 Clca4b protein_coding protein_coding MGP_BALBcJ_T0001174.1 MGP_BALBcJ_G0001099.1 mouse_genomes_project 3 47594419 47598106 - TEC TEC MGP_BALBcJ_T0014259.1 MGP_BALBcJ_G0012356.1 mouse_genomes_project 3 115119510 115119888 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001384.1 MGP_BALBcJ_G0001306.1 mouse_genomes_project 3 152284151 152286125 - TEC TEC MGP_BALBcJ_T0061330.1 MGP_BALBcJ_G0027315.1 mouse_genomes_project 3 81622187 81660452 - MGP_BALBcJ_P0061330 Fhdc1 protein_coding protein_coding MGP_BALBcJ_T0061331.1 MGP_BALBcJ_G0027315.1 mouse_genomes_project 3 81624024 81659514 - MGP_BALBcJ_P0061331 Fhdc1 protein_coding protein_coding MGP_BALBcJ_T0061332.1 MGP_BALBcJ_G0027315.1 mouse_genomes_project 3 81624097 81660416 - MGP_BALBcJ_P0061332 Fhdc1 protein_coding protein_coding MGP_BALBcJ_T0061333.1 MGP_BALBcJ_G0027315.1 mouse_genomes_project 3 81628800 81634050 - Fhdc1 protein_coding retained_intron MGP_BALBcJ_T0061334.1 MGP_BALBcJ_G0027315.1 mouse_genomes_project 3 81654527 81659005 - Fhdc1 protein_coding processed_transcript MGP_BALBcJ_T0007567.1 MGP_BALBcJ_G0006192.1 mouse_genomes_project 3 80309485 80313453 - Gm10710 lincRNA lincRNA MGP_BALBcJ_T0101908.1 MGP_BALBcJ_G0039793.1 mouse_genomes_project 3 92066459 92072696 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101909.1 MGP_BALBcJ_G0039793.1 mouse_genomes_project 3 92066510 92076476 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0004210.1 MGP_BALBcJ_G0003705.1 mouse_genomes_project 3 33111278 33113613 + Gm43255 antisense antisense MGP_BALBcJ_T0013978.1 MGP_BALBcJ_G0012075.1 mouse_genomes_project 3 34858927 34859403 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014174.1 MGP_BALBcJ_G0012271.1 mouse_genomes_project 3 93335791 93336686 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063312.1 MGP_BALBcJ_G0027777.1 mouse_genomes_project 3 113971733 113991490 - MGP_BALBcJ_P0063312 Vcam1 protein_coding protein_coding MGP_BALBcJ_T0063313.1 MGP_BALBcJ_G0027777.1 mouse_genomes_project 3 113978513 113982605 - Vcam1 protein_coding retained_intron MGP_BALBcJ_T0063314.1 MGP_BALBcJ_G0027777.1 mouse_genomes_project 3 113984157 113991259 - MGP_BALBcJ_P0063314 Vcam1 protein_coding protein_coding MGP_BALBcJ_T0063315.1 MGP_BALBcJ_G0027777.1 mouse_genomes_project 3 113986496 113990739 - MGP_BALBcJ_P0063315 Vcam1 protein_coding protein_coding MGP_BALBcJ_T0064006.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139297885 139668601 + MGP_BALBcJ_P0064006 Unc5c protein_coding protein_coding MGP_BALBcJ_T0064007.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139298243 139663143 + MGP_BALBcJ_P0064007 Unc5c protein_coding protein_coding MGP_BALBcJ_T0064008.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139298268 139497707 + Unc5c protein_coding processed_transcript MGP_BALBcJ_T0064009.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139298268 139303608 + Unc5c protein_coding retained_intron MGP_BALBcJ_T0064010.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139298268 139518369 + Unc5c protein_coding retained_intron MGP_BALBcJ_T0064011.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139298268 139663095 + MGP_BALBcJ_P0064011 Unc5c protein_coding protein_coding MGP_BALBcJ_T0064012.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139298340 139664212 + MGP_BALBcJ_P0064012 Unc5c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064013.1 MGP_BALBcJ_G0027907.1 mouse_genomes_project 3 139623567 139625717 + Unc5c protein_coding retained_intron MGP_BALBcJ_T0017966.1 MGP_BALBcJ_G0015462.1 mouse_genomes_project 3 120671330 120712358 - 4930447N08Rik processed_transcript antisense MGP_BALBcJ_T0017967.1 MGP_BALBcJ_G0015462.1 mouse_genomes_project 3 120678915 120712457 - 4930447N08Rik processed_transcript retained_intron MGP_BALBcJ_T0017968.1 MGP_BALBcJ_G0015462.1 mouse_genomes_project 3 120705491 120712303 - 4930447N08Rik processed_transcript processed_transcript MGP_BALBcJ_T0017969.1 MGP_BALBcJ_G0015462.1 mouse_genomes_project 3 120705498 120712390 - 4930447N08Rik processed_transcript antisense MGP_BALBcJ_T0061696.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86302252 86310614 - MGP_BALBcJ_P0061696 Fdps protein_coding protein_coding MGP_BALBcJ_T0061697.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86302252 86310543 - MGP_BALBcJ_P0061697 Fdps protein_coding protein_coding MGP_BALBcJ_T0061698.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86302413 86304344 - MGP_BALBcJ_P0061698 Fdps protein_coding protein_coding MGP_BALBcJ_T0061699.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86303720 86304648 - Fdps protein_coding retained_intron MGP_BALBcJ_T0061700.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86304028 86309970 - MGP_BALBcJ_P0061700 Fdps protein_coding protein_coding MGP_BALBcJ_T0061701.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86304263 86310507 - MGP_BALBcJ_P0061701 Fdps protein_coding protein_coding MGP_BALBcJ_T0061702.1 MGP_BALBcJ_G0027388.1 mouse_genomes_project 3 86307593 86310546 - Fdps protein_coding retained_intron MGP_BALBcJ_T0004202.1 MGP_BALBcJ_G0003701.1 mouse_genomes_project 3 29866965 29930830 + 4930419G24Rik antisense antisense MGP_BALBcJ_T0004273.1 MGP_BALBcJ_G0003754.1 mouse_genomes_project 3 92460516 92463466 - B230398E01Rik antisense antisense MGP_BALBcJ_T0061361.1 MGP_BALBcJ_G0027323.1 mouse_genomes_project 3 83071418 83089953 - MGP_BALBcJ_P0061361 Glt28d2 protein_coding protein_coding MGP_BALBcJ_T0001146.1 MGP_BALBcJ_G0001071.1 mouse_genomes_project 3 34237126 34239634 + TEC TEC MGP_BALBcJ_T0014009.1 MGP_BALBcJ_G0012106.1 mouse_genomes_project 3 46577126 46577661 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063920.1 MGP_BALBcJ_G0027887.1 mouse_genomes_project 3 135716451 135717974 + H2afz protein_coding processed_transcript MGP_BALBcJ_T0063921.1 MGP_BALBcJ_G0027887.1 mouse_genomes_project 3 135716554 135718446 + MGP_BALBcJ_P0063921 H2afz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063922.1 MGP_BALBcJ_G0027887.1 mouse_genomes_project 3 135716554 135718721 + MGP_BALBcJ_P0063922 H2afz protein_coding protein_coding MGP_BALBcJ_T0063923.1 MGP_BALBcJ_G0027887.1 mouse_genomes_project 3 135716858 135718534 + H2afz protein_coding retained_intron MGP_BALBcJ_T0063924.1 MGP_BALBcJ_G0027887.1 mouse_genomes_project 3 135717004 135718278 + H2afz protein_coding retained_intron MGP_BALBcJ_T0013906.1 MGP_BALBcJ_G0012003.1 mouse_genomes_project 3 10667635 10668992 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062992.1 MGP_BALBcJ_G0027702.1 mouse_genomes_project 3 103881874 103904005 - MGP_BALBcJ_P0062992 Chil3 protein_coding protein_coding MGP_BALBcJ_T0062993.1 MGP_BALBcJ_G0027702.1 mouse_genomes_project 3 103882917 103885602 - MGP_BALBcJ_P0062993 Chil3 protein_coding protein_coding MGP_BALBcJ_T0062994.1 MGP_BALBcJ_G0027702.1 mouse_genomes_project 3 103891524 103896458 - Chil3 protein_coding retained_intron MGP_BALBcJ_T0101030.1 MGP_BALBcJ_G0039066.1 mouse_genomes_project 3 43172240 43172372 + Gm26081 snoRNA snoRNA MGP_BALBcJ_T0013871.1 MGP_BALBcJ_G0011968.1 mouse_genomes_project 3 1195688 1195905 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062639.1 MGP_BALBcJ_G0027619.1 mouse_genomes_project 3 95622168 95709504 + Notch2 protein_coding retained_intron MGP_BALBcJ_T0062640.1 MGP_BALBcJ_G0027619.1 mouse_genomes_project 3 95622179 95759999 + MGP_BALBcJ_P0062640 Notch2 protein_coding protein_coding MGP_BALBcJ_T0014329.1 MGP_BALBcJ_G0012426.1 mouse_genomes_project 3 137957949 137959330 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011511.1 MGP_BALBcJ_G0009636.1 mouse_genomes_project 3 16226224 16226536 + Gm22282 misc_RNA misc_RNA MGP_BALBcJ_T0102469.1 MGP_BALBcJ_G0040285.1 mouse_genomes_project 3 77331101 77331252 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060919.1 MGP_BALBcJ_G0027217.1 mouse_genomes_project 3 56047010 56048202 - Gpr87 protein_coding retained_intron MGP_BALBcJ_T0060920.1 MGP_BALBcJ_G0027217.1 mouse_genomes_project 3 56047010 56063192 - MGP_BALBcJ_P0060920 Gpr87 protein_coding protein_coding MGP_BALBcJ_T0060921.1 MGP_BALBcJ_G0027217.1 mouse_genomes_project 3 56047093 56048173 - MGP_BALBcJ_P0060921 Gpr87 protein_coding protein_coding MGP_BALBcJ_T0061163.1 MGP_BALBcJ_G0027277.1 mouse_genomes_project 3 72390055 72417313 - MGP_BALBcJ_P0061163 Serpini2 protein_coding protein_coding MGP_BALBcJ_T0014232.1 MGP_BALBcJ_G0012329.1 mouse_genomes_project 3 108046595 108046932 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007701.1 MGP_BALBcJ_G0006298.1 mouse_genomes_project 3 138542095 138609624 - lincRNA lincRNA MGP_BALBcJ_T0007702.1 MGP_BALBcJ_G0006298.1 mouse_genomes_project 3 138608984 138609624 - lincRNA lincRNA MGP_BALBcJ_T0062125.1 MGP_BALBcJ_G0027504.1 mouse_genomes_project 3 90491633 90496305 + MGP_BALBcJ_P0062125 Crnn protein_coding protein_coding MGP_BALBcJ_T0062126.1 MGP_BALBcJ_G0027504.1 mouse_genomes_project 3 90491635 90496643 + MGP_BALBcJ_P0062126 Crnn protein_coding protein_coding MGP_BALBcJ_T0062127.1 MGP_BALBcJ_G0027504.1 mouse_genomes_project 3 90495043 90496642 + MGP_BALBcJ_P0062127 Crnn protein_coding protein_coding MGP_BALBcJ_T0063842.1 MGP_BALBcJ_G0027875.1 mouse_genomes_project 3 133186593 133222050 + MGP_BALBcJ_P0063842 Slc9b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063843.1 MGP_BALBcJ_G0027875.1 mouse_genomes_project 3 133186624 133203717 + Slc9b2 protein_coding retained_intron MGP_BALBcJ_T0063844.1 MGP_BALBcJ_G0027875.1 mouse_genomes_project 3 133186635 133197249 + MGP_BALBcJ_P0063844 Slc9b2 protein_coding protein_coding MGP_BALBcJ_T0063845.1 MGP_BALBcJ_G0027875.1 mouse_genomes_project 3 133186638 133224652 + MGP_BALBcJ_P0063845 Slc9b2 protein_coding protein_coding MGP_BALBcJ_T0063846.1 MGP_BALBcJ_G0027875.1 mouse_genomes_project 3 133209820 133222282 + Slc9b2 protein_coding retained_intron MGP_BALBcJ_T0063511.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120847318 120900013 - MGP_BALBcJ_P0063511 Usp53 protein_coding protein_coding MGP_BALBcJ_T0063512.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120863022 120865453 - Usp53 protein_coding retained_intron MGP_BALBcJ_T0063513.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120867122 120899826 - MGP_BALBcJ_P0063513 Usp53 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063514.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120868469 120900009 - MGP_BALBcJ_P0063514 Usp53 protein_coding protein_coding MGP_BALBcJ_T0063515.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120871407 120900007 - MGP_BALBcJ_P0063515 Usp53 protein_coding protein_coding MGP_BALBcJ_T0063516.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120872892 120900013 - Usp53 protein_coding retained_intron MGP_BALBcJ_T0063517.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120874739 120877182 - Usp53 protein_coding retained_intron MGP_BALBcJ_T0063518.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120874782 120899974 - MGP_BALBcJ_P0063518 Usp53 protein_coding protein_coding MGP_BALBcJ_T0063519.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120875493 120878883 - Usp53 protein_coding retained_intron MGP_BALBcJ_T0063520.1 MGP_BALBcJ_G0027816.1 mouse_genomes_project 3 120883348 120899396 - Usp53 protein_coding retained_intron MGP_BALBcJ_T0001390.1 MGP_BALBcJ_G0001312.1 mouse_genomes_project 3 155044605 155047780 + TEC TEC MGP_BALBcJ_T0063916.1 MGP_BALBcJ_G0027885.1 mouse_genomes_project 3 135426706 135429284 - protein_coding lincRNA MGP_BALBcJ_T0060075.1 MGP_BALBcJ_G0027058.1 mouse_genomes_project 3 13070402 13105617 + MGP_BALBcJ_P0060075 Ythdf3 protein_coding protein_coding MGP_BALBcJ_T0060076.1 MGP_BALBcJ_G0027058.1 mouse_genomes_project 3 13070426 13092466 + Ythdf3 protein_coding processed_transcript MGP_BALBcJ_T0060077.1 MGP_BALBcJ_G0027058.1 mouse_genomes_project 3 13070426 13103585 + MGP_BALBcJ_P0060077 Ythdf3 protein_coding protein_coding MGP_BALBcJ_T0060078.1 MGP_BALBcJ_G0027058.1 mouse_genomes_project 3 13070426 13105435 + MGP_BALBcJ_P0060078 Ythdf3 protein_coding protein_coding MGP_BALBcJ_T0102499.1 MGP_BALBcJ_G0040315.1 mouse_genomes_project 3 120018335 120125488 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007730.1 MGP_BALBcJ_G0006321.1 mouse_genomes_project 3 143992811 143994411 + Gm43861 lincRNA lincRNA MGP_BALBcJ_T0098897.1 MGP_BALBcJ_G0036944.1 mouse_genomes_project 3 99264970 99265722 - Gm42937 sense_intronic sense_intronic MGP_BALBcJ_T0010516.1 MGP_BALBcJ_G0008641.1 mouse_genomes_project 3 90720243 90720381 + Gm44353 miRNA miRNA MGP_BALBcJ_T0059990.1 MGP_BALBcJ_G0027030.1 mouse_genomes_project 3 6256633 6440081 - MGP_BALBcJ_P0059990 Zfp704 protein_coding protein_coding MGP_BALBcJ_T0059991.1 MGP_BALBcJ_G0027030.1 mouse_genomes_project 3 6267945 6396108 - MGP_BALBcJ_P0059991 Zfp704 protein_coding protein_coding MGP_BALBcJ_T0059992.1 MGP_BALBcJ_G0027030.1 mouse_genomes_project 3 6268353 6270694 - Zfp704 protein_coding retained_intron MGP_BALBcJ_T0017965.1 MGP_BALBcJ_G0015461.1 mouse_genomes_project 3 120184307 120191446 - processed_transcript retained_intron MGP_BALBcJ_T0014320.1 MGP_BALBcJ_G0012417.1 mouse_genomes_project 3 136346975 136347201 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014015.1 MGP_BALBcJ_G0012112.1 mouse_genomes_project 3 47518029 47518405 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014034.1 MGP_BALBcJ_G0012131.1 mouse_genomes_project 3 54403964 54404514 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001151.1 MGP_BALBcJ_G0001076.1 mouse_genomes_project 3 34741182 34742288 + TEC TEC MGP_BALBcJ_T0001261.1 MGP_BALBcJ_G0001184.1 mouse_genomes_project 3 93119081 93120688 + TEC TEC MGP_BALBcJ_T0061428.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84984435 85005960 - MGP_BALBcJ_P0061428 Pear1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061429.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985640 85005965 - MGP_BALBcJ_P0061429 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061430.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985640 85060958 - MGP_BALBcJ_P0061430 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061431.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985640 85060907 - MGP_BALBcJ_P0061431 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061432.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985641 84999257 - Pear1 protein_coding retained_intron MGP_BALBcJ_T0061433.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985641 85005961 - MGP_BALBcJ_P0061433 Pear1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061434.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985641 85005955 - MGP_BALBcJ_P0061434 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061435.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84985649 84990855 - Pear1 protein_coding retained_intron MGP_BALBcJ_T0061436.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84986442 85005955 - MGP_BALBcJ_P0061436 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061437.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84988001 84990484 - MGP_BALBcJ_P0061437 Pear1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061438.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84988982 84993476 - MGP_BALBcJ_P0061438 Pear1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061439.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84993174 85005955 - MGP_BALBcJ_P0061439 Pear1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061440.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84994503 85005967 - Pear1 protein_coding retained_intron MGP_BALBcJ_T0061441.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84994943 85005955 - MGP_BALBcJ_P0061441 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061442.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84994956 85005955 - MGP_BALBcJ_P0061442 Pear1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061443.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84994970 85005978 - MGP_BALBcJ_P0061443 Pear1 protein_coding protein_coding MGP_BALBcJ_T0061444.1 MGP_BALBcJ_G0027340.1 mouse_genomes_project 3 84996017 85005947 - MGP_BALBcJ_P0061444 Pear1 protein_coding protein_coding MGP_BALBcJ_T0001206.1 MGP_BALBcJ_G0001129.1 mouse_genomes_project 3 50024397 50025221 + TEC TEC MGP_BALBcJ_T0014138.1 MGP_BALBcJ_G0012235.1 mouse_genomes_project 3 84272711 84273020 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014302.1 MGP_BALBcJ_G0012399.1 mouse_genomes_project 3 132228812 132229311 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061250.1 MGP_BALBcJ_G0027295.1 mouse_genomes_project 3 79119613 79144940 + MGP_BALBcJ_P0061250 Ctso protein_coding protein_coding MGP_BALBcJ_T0061251.1 MGP_BALBcJ_G0027295.1 mouse_genomes_project 3 79119635 79120338 + Ctso protein_coding retained_intron MGP_BALBcJ_T0061252.1 MGP_BALBcJ_G0027295.1 mouse_genomes_project 3 79119655 79130014 + Ctso protein_coding processed_transcript MGP_BALBcJ_T0061253.1 MGP_BALBcJ_G0027295.1 mouse_genomes_project 3 79139159 79142523 + Ctso protein_coding retained_intron MGP_BALBcJ_T0064249.1 MGP_BALBcJ_G0027956.1 mouse_genomes_project 3 149825178 149868624 - MGP_BALBcJ_P0064249 Ptgfr protein_coding protein_coding MGP_BALBcJ_T0064250.1 MGP_BALBcJ_G0027956.1 mouse_genomes_project 3 149829997 149866539 - MGP_BALBcJ_P0064250 Ptgfr protein_coding protein_coding MGP_BALBcJ_T0064251.1 MGP_BALBcJ_G0027956.1 mouse_genomes_project 3 149830369 149864671 - Ptgfr protein_coding processed_transcript MGP_BALBcJ_T0014092.1 MGP_BALBcJ_G0012189.1 mouse_genomes_project 3 68476094 68476551 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014189.1 MGP_BALBcJ_G0012286.1 mouse_genomes_project 3 97132089 97132323 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001175.1 MGP_BALBcJ_G0001100.1 mouse_genomes_project 3 47752885 47756663 - TEC TEC MGP_BALBcJ_T0001386.1 MGP_BALBcJ_G0001308.1 mouse_genomes_project 3 153131124 153133912 + TEC TEC MGP_BALBcJ_T0013903.1 MGP_BALBcJ_G0012000.1 mouse_genomes_project 3 10244877 10245278 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060471.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33457195 33467861 + MGP_BALBcJ_P0060471 Exosc9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060472.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33457195 33470317 + MGP_BALBcJ_P0060472 Exosc9 protein_coding protein_coding MGP_BALBcJ_T0060473.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33457203 33461367 + Exosc9 protein_coding retained_intron MGP_BALBcJ_T0060474.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33457216 33461587 + Exosc9 protein_coding retained_intron MGP_BALBcJ_T0060475.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33457227 33461541 + MGP_BALBcJ_P0060475 Exosc9 protein_coding protein_coding MGP_BALBcJ_T0060476.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33457240 33465995 + Exosc9 protein_coding retained_intron MGP_BALBcJ_T0060477.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33460142 33467836 + MGP_BALBcJ_P0060477 Exosc9 protein_coding protein_coding MGP_BALBcJ_T0060478.1 MGP_BALBcJ_G0027132.1 mouse_genomes_project 3 33466685 33470235 + MGP_BALBcJ_P0060478 Exosc9 protein_coding protein_coding MGP_BALBcJ_T0017916.1 MGP_BALBcJ_G0015443.1 mouse_genomes_project 3 48443232 48450314 + 5031434O11Rik processed_transcript antisense MGP_BALBcJ_T0017917.1 MGP_BALBcJ_G0015443.1 mouse_genomes_project 3 48445668 48450302 + 5031434O11Rik processed_transcript antisense MGP_BALBcJ_T0017918.1 MGP_BALBcJ_G0015443.1 mouse_genomes_project 3 48446838 48450308 + 5031434O11Rik processed_transcript retained_intron MGP_BALBcJ_T0001331.1 MGP_BALBcJ_G0001254.1 mouse_genomes_project 3 125291308 125294527 - TEC TEC MGP_BALBcJ_T0062060.1 MGP_BALBcJ_G0027451.1 mouse_genomes_project 3 87908152 87912699 + MGP_BALBcJ_P0062060 S100a7a protein_coding protein_coding MGP_BALBcJ_T0001306.1 MGP_BALBcJ_G0001229.1 mouse_genomes_project 3 120910913 120914548 + TEC TEC MGP_BALBcJ_T0013916.1 MGP_BALBcJ_G0012013.1 mouse_genomes_project 3 14097552 14097886 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013891.1 MGP_BALBcJ_G0011988.1 mouse_genomes_project 3 6734371 6738209 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064044.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140554701 140598781 + MGP_BALBcJ_P0064044 Kyat3 protein_coding protein_coding MGP_BALBcJ_T0064045.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140554730 140601124 + MGP_BALBcJ_P0064045 Kyat3 protein_coding protein_coding MGP_BALBcJ_T0064046.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140554736 140580448 + MGP_BALBcJ_P0064046 Kyat3 protein_coding protein_coding MGP_BALBcJ_T0064047.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140554744 140598592 + MGP_BALBcJ_P0064047 Kyat3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064048.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140577365 140585541 + Kyat3 protein_coding processed_transcript MGP_BALBcJ_T0064049.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140582643 140584604 + Kyat3 protein_coding retained_intron MGP_BALBcJ_T0064050.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140591881 140595217 + Kyat3 protein_coding retained_intron MGP_BALBcJ_T0064051.1 MGP_BALBcJ_G0027915.1 mouse_genomes_project 3 140592780 140598590 + Kyat3 protein_coding processed_transcript MGP_BALBcJ_T0014139.1 MGP_BALBcJ_G0012236.1 mouse_genomes_project 3 85205545 85205966 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014365.1 MGP_BALBcJ_G0012462.1 mouse_genomes_project 3 157009341 157010338 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064485.1 MGP_BALBcJ_G0027988.1 mouse_genomes_project 3 157548554 157585172 + MGP_BALBcJ_P0064485 Depdc1a protein_coding protein_coding MGP_BALBcJ_T0064486.1 MGP_BALBcJ_G0027988.1 mouse_genomes_project 3 157548572 157584794 + MGP_BALBcJ_P0064486 Depdc1a protein_coding protein_coding MGP_BALBcJ_T0064487.1 MGP_BALBcJ_G0027988.1 mouse_genomes_project 3 157548579 157584677 + MGP_BALBcJ_P0064487 Depdc1a protein_coding protein_coding MGP_BALBcJ_T0010537.1 MGP_BALBcJ_G0008662.1 mouse_genomes_project 3 125448485 125448560 + Mir367 miRNA miRNA MGP_BALBcJ_T0098898.1 MGP_BALBcJ_G0036945.1 mouse_genomes_project 3 99280468 99281786 - Gm42941 sense_intronic sense_intronic MGP_BALBcJ_T0007762.1 MGP_BALBcJ_G0006342.1 mouse_genomes_project 3 155773329 155779228 - Gm33466 lincRNA lincRNA MGP_BALBcJ_T0064383.1 MGP_BALBcJ_G0027972.1 mouse_genomes_project 3 152008036 152308731 + MGP_BALBcJ_P0064383 Slc44a5 protein_coding protein_coding MGP_BALBcJ_T0064384.1 MGP_BALBcJ_G0027972.1 mouse_genomes_project 3 152008365 152304789 + MGP_BALBcJ_P0064384 Slc44a5 protein_coding unknown_likely_coding MGP_BALBcJ_T0064385.1 MGP_BALBcJ_G0027972.1 mouse_genomes_project 3 152257822 152260918 + Slc44a5 protein_coding processed_transcript MGP_BALBcJ_T0064386.1 MGP_BALBcJ_G0027972.1 mouse_genomes_project 3 152294590 152308731 + Slc44a5 protein_coding retained_intron MGP_BALBcJ_T0014061.1 MGP_BALBcJ_G0012158.1 mouse_genomes_project 3 60780426 60781380 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013920.1 MGP_BALBcJ_G0012017.1 mouse_genomes_project 3 14804940 14805857 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061600.1 MGP_BALBcJ_G0027374.1 mouse_genomes_project 3 85810908 85812185 - Lamtor2 protein_coding retained_intron MGP_BALBcJ_T0061601.1 MGP_BALBcJ_G0027374.1 mouse_genomes_project 3 85810908 85814126 - MGP_BALBcJ_P0061601 Lamtor2 protein_coding protein_coding MGP_BALBcJ_T0061602.1 MGP_BALBcJ_G0027374.1 mouse_genomes_project 3 85810909 85813961 - MGP_BALBcJ_P0061602 Lamtor2 protein_coding protein_coding MGP_BALBcJ_T0061603.1 MGP_BALBcJ_G0027374.1 mouse_genomes_project 3 85810910 85813995 - Lamtor2 protein_coding processed_transcript MGP_BALBcJ_T0061604.1 MGP_BALBcJ_G0027374.1 mouse_genomes_project 3 85813331 85814176 - Lamtor2 protein_coding retained_intron MGP_BALBcJ_T0098718.1 MGP_BALBcJ_G0036772.1 mouse_genomes_project 3 13004405 13004734 - Gm25863 ribozyme ribozyme MGP_BALBcJ_T0099763.1 MGP_BALBcJ_G0037799.1 mouse_genomes_project 3 87439560 87439665 + Gm24185 snRNA snRNA MGP_BALBcJ_T0063912.1 MGP_BALBcJ_G0027884.1 mouse_genomes_project 3 135235640 135330468 + MGP_BALBcJ_P0063912 Emcn protein_coding protein_coding MGP_BALBcJ_T0063913.1 MGP_BALBcJ_G0027884.1 mouse_genomes_project 3 135235663 135320247 + Emcn protein_coding retained_intron MGP_BALBcJ_T0063914.1 MGP_BALBcJ_G0027884.1 mouse_genomes_project 3 135235716 135329352 + MGP_BALBcJ_P0063914 Emcn protein_coding protein_coding MGP_BALBcJ_T0063915.1 MGP_BALBcJ_G0027884.1 mouse_genomes_project 3 135235747 135325627 + MGP_BALBcJ_P0063915 Emcn protein_coding protein_coding MGP_BALBcJ_T0014040.1 MGP_BALBcJ_G0012137.1 mouse_genomes_project 3 55181133 55181505 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014261.1 MGP_BALBcJ_G0012358.1 mouse_genomes_project 3 117663241 117663415 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001398.1 MGP_BALBcJ_G0001320.1 mouse_genomes_project 3 156343219 156347558 + TEC TEC MGP_BALBcJ_T0063047.1 MGP_BALBcJ_G0027718.1 mouse_genomes_project 3 105024775 105046141 + MGP_BALBcJ_P0063047 Slc16a4 protein_coding protein_coding MGP_BALBcJ_T0063048.1 MGP_BALBcJ_G0027718.1 mouse_genomes_project 3 105024839 105036658 + Slc16a4 protein_coding retained_intron MGP_BALBcJ_T0063049.1 MGP_BALBcJ_G0027718.1 mouse_genomes_project 3 105024860 105041746 + MGP_BALBcJ_P0063049 Slc16a4 protein_coding protein_coding MGP_BALBcJ_T0013927.1 MGP_BALBcJ_G0012024.1 mouse_genomes_project 3 16591148 16592199 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017914.1 MGP_BALBcJ_G0015442.1 mouse_genomes_project 3 47444676 47526780 - Gm6209 processed_transcript lincRNA MGP_BALBcJ_T0017915.1 MGP_BALBcJ_G0015442.1 mouse_genomes_project 3 47498842 47503402 - Gm6209 processed_transcript retained_intron MGP_BALBcJ_T0014144.1 MGP_BALBcJ_G0012241.1 mouse_genomes_project 3 87048002 87048528 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101036.1 MGP_BALBcJ_G0039072.1 mouse_genomes_project 3 53346017 53346148 - Gm25727 snoRNA snoRNA MGP_BALBcJ_T0063104.1 MGP_BALBcJ_G0027732.1 mouse_genomes_project 3 105709870 105716033 - MGP_BALBcJ_P0063104 protein_coding protein_coding MGP_BALBcJ_T0060596.1 MGP_BALBcJ_G0027155.1 mouse_genomes_project 3 37663658 37755377 + MGP_BALBcJ_P0060596 Abhd18 protein_coding protein_coding MGP_BALBcJ_T0060597.1 MGP_BALBcJ_G0027155.1 mouse_genomes_project 3 37719566 37757208 + MGP_BALBcJ_P0060597 Abhd18 protein_coding protein_coding MGP_BALBcJ_T0060598.1 MGP_BALBcJ_G0027155.1 mouse_genomes_project 3 37719566 37756207 + MGP_BALBcJ_P0060598 Abhd18 protein_coding protein_coding MGP_BALBcJ_T0060599.1 MGP_BALBcJ_G0027155.1 mouse_genomes_project 3 37719566 37757206 + MGP_BALBcJ_P0060599 Abhd18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060600.1 MGP_BALBcJ_G0027155.1 mouse_genomes_project 3 37719566 37756224 + MGP_BALBcJ_P0060600 Abhd18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060601.1 MGP_BALBcJ_G0027155.1 mouse_genomes_project 3 37749614 37755765 + Abhd18 protein_coding processed_transcript MGP_BALBcJ_T0004315.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105634323 105642347 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004316.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105636167 105641900 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004317.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105637605 105641932 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004318.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105638998 105641826 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004319.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639029 105641907 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004320.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639258 105641943 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004321.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639357 105641908 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004322.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639401 105641917 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004323.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639553 105641923 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004324.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639607 105641934 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004325.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105639637 105641897 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0004326.1 MGP_BALBcJ_G0003780.1 mouse_genomes_project 3 105640263 105641946 - 4933431E20Rik antisense antisense MGP_BALBcJ_T0013888.1 MGP_BALBcJ_G0011985.1 mouse_genomes_project 3 5867589 5867911 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014345.1 MGP_BALBcJ_G0012442.1 mouse_genomes_project 3 143683411 143683851 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061396.1 MGP_BALBcJ_G0027333.1 mouse_genomes_project 3 84468741 84481622 - MGP_BALBcJ_P0061396 Fcrls protein_coding protein_coding MGP_BALBcJ_T0061397.1 MGP_BALBcJ_G0027333.1 mouse_genomes_project 3 84476950 84481761 - MGP_BALBcJ_P0061397 Fcrls protein_coding protein_coding MGP_BALBcJ_T0062509.1 MGP_BALBcJ_G0027582.1 mouse_genomes_project 3 93762508 93765129 + MGP_BALBcJ_P0062509 Hist2h2be protein_coding protein_coding MGP_BALBcJ_T0001266.1 MGP_BALBcJ_G0001189.1 mouse_genomes_project 3 94305324 94306119 - TEC TEC MGP_BALBcJ_T0099753.1 MGP_BALBcJ_G0037789.1 mouse_genomes_project 3 83165005 83165069 - Gm27811 snRNA snRNA MGP_BALBcJ_T0004376.1 MGP_BALBcJ_G0003817.1 mouse_genomes_project 3 139290570 139298003 - Gm15688 antisense antisense MGP_BALBcJ_T0062752.1 MGP_BALBcJ_G0027654.1 mouse_genomes_project 3 100161876 100212689 + MGP_BALBcJ_P0062752 Ngf protein_coding protein_coding MGP_BALBcJ_T0062753.1 MGP_BALBcJ_G0027654.1 mouse_genomes_project 3 100161885 100201683 + MGP_BALBcJ_P0062753 Ngf protein_coding protein_coding MGP_BALBcJ_T0062754.1 MGP_BALBcJ_G0027654.1 mouse_genomes_project 3 100161885 100212854 + MGP_BALBcJ_P0062754 Ngf protein_coding protein_coding MGP_BALBcJ_T0062755.1 MGP_BALBcJ_G0027654.1 mouse_genomes_project 3 100180629 100212836 + MGP_BALBcJ_P0062755 Ngf protein_coding protein_coding MGP_BALBcJ_T0001290.1 MGP_BALBcJ_G0001213.1 mouse_genomes_project 3 114827762 114831734 - TEC TEC MGP_BALBcJ_T0001316.1 MGP_BALBcJ_G0001239.1 mouse_genomes_project 3 124512122 124514601 + TEC TEC MGP_BALBcJ_T0060073.1 MGP_BALBcJ_G0027057.1 mouse_genomes_project 3 12826887 12892742 - MGP_BALBcJ_P0060073 Gm5150 protein_coding protein_coding MGP_BALBcJ_T0060074.1 MGP_BALBcJ_G0027057.1 mouse_genomes_project 3 12828086 12892637 - MGP_BALBcJ_P0060074 Gm5150 protein_coding protein_coding MGP_BALBcJ_T0060708.1 MGP_BALBcJ_G0027171.1 mouse_genomes_project 3 48397242 48444077 - MGP_BALBcJ_P0060708 Setd7 protein_coding protein_coding MGP_BALBcJ_T0060709.1 MGP_BALBcJ_G0027171.1 mouse_genomes_project 3 48412331 48419198 - Setd7 protein_coding retained_intron MGP_BALBcJ_T0060710.1 MGP_BALBcJ_G0027171.1 mouse_genomes_project 3 48418051 48419679 - Setd7 protein_coding retained_intron MGP_BALBcJ_T0060711.1 MGP_BALBcJ_G0027171.1 mouse_genomes_project 3 48431857 48434495 - Setd7 protein_coding retained_intron MGP_BALBcJ_T0014216.1 MGP_BALBcJ_G0012313.1 mouse_genomes_project 3 103773429 103773858 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014203.1 MGP_BALBcJ_G0012300.1 mouse_genomes_project 3 100378142 100379039 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060194.1 MGP_BALBcJ_G0027082.1 mouse_genomes_project 3 24126633 24149318 + MGP_BALBcJ_P0060194 Tnfsf10 protein_coding protein_coding MGP_BALBcJ_T0060195.1 MGP_BALBcJ_G0027082.1 mouse_genomes_project 3 24126666 24151969 + MGP_BALBcJ_P0060195 Tnfsf10 protein_coding protein_coding MGP_BALBcJ_T0062478.1 MGP_BALBcJ_G0027573.1 mouse_genomes_project 3 93531175 93538456 - MGP_BALBcJ_P0062478 Plekho1 protein_coding protein_coding MGP_BALBcJ_T0062479.1 MGP_BALBcJ_G0027573.1 mouse_genomes_project 3 93531565 93538292 - MGP_BALBcJ_P0062479 Plekho1 protein_coding protein_coding MGP_BALBcJ_T0062480.1 MGP_BALBcJ_G0027573.1 mouse_genomes_project 3 93532137 93538292 - MGP_BALBcJ_P0062480 Plekho1 protein_coding protein_coding MGP_BALBcJ_T0014042.1 MGP_BALBcJ_G0012139.1 mouse_genomes_project 3 55522858 55523888 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014152.1 MGP_BALBcJ_G0012249.1 mouse_genomes_project 3 89653260 89653397 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101038.1 MGP_BALBcJ_G0039074.1 mouse_genomes_project 3 61267084 61267242 - Gm23897 snoRNA snoRNA MGP_BALBcJ_T0062710.1 MGP_BALBcJ_G0027643.1 mouse_genomes_project 3 98620861 98651553 - MGP_BALBcJ_P0062710 Ttf2 protein_coding protein_coding MGP_BALBcJ_T0062711.1 MGP_BALBcJ_G0027643.1 mouse_genomes_project 3 98623849 98628262 - Ttf2 protein_coding retained_intron MGP_BALBcJ_T0062712.1 MGP_BALBcJ_G0027643.1 mouse_genomes_project 3 98628254 98651553 - Ttf2 protein_coding retained_intron MGP_BALBcJ_T0062713.1 MGP_BALBcJ_G0027643.1 mouse_genomes_project 3 98629367 98634450 - MGP_BALBcJ_P0062713 Ttf2 protein_coding protein_coding MGP_BALBcJ_T0062714.1 MGP_BALBcJ_G0027643.1 mouse_genomes_project 3 98640598 98641834 - Ttf2 protein_coding retained_intron MGP_BALBcJ_T0001100.1 MGP_BALBcJ_G0001026.1 mouse_genomes_project 3 1706 1833 + TEC TEC MGP_BALBcJ_T0098892.1 MGP_BALBcJ_G0036939.1 mouse_genomes_project 3 98303458 98307100 - Gm43462 sense_intronic sense_intronic MGP_BALBcJ_T0007707.1 MGP_BALBcJ_G0006302.1 mouse_genomes_project 3 140871692 140890880 + 4930519L02Rik lincRNA lincRNA MGP_BALBcJ_T0062881.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685152 101725901 + MGP_BALBcJ_P0062881 Phtf1 protein_coding protein_coding MGP_BALBcJ_T0062882.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685300 101725901 + MGP_BALBcJ_P0062882 Phtf1 protein_coding protein_coding MGP_BALBcJ_T0062883.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685408 101743403 + MGP_BALBcJ_P0062883 Phtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062884.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685410 101725903 + MGP_BALBcJ_P0062884 Phtf1 protein_coding protein_coding MGP_BALBcJ_T0062885.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685414 101725901 + Phtf1 protein_coding retained_intron MGP_BALBcJ_T0062886.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685416 101708903 + MGP_BALBcJ_P0062886 Phtf1 protein_coding protein_coding MGP_BALBcJ_T0062887.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685488 101725903 + MGP_BALBcJ_P0062887 Phtf1 protein_coding protein_coding MGP_BALBcJ_T0062888.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685630 101705337 + MGP_BALBcJ_P0062888 Phtf1 protein_coding protein_coding MGP_BALBcJ_T0062889.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101685967 101715934 + MGP_BALBcJ_P0062889 Phtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062890.1 MGP_BALBcJ_G0027676.1 mouse_genomes_project 3 101714832 101715978 + Phtf1 protein_coding retained_intron MGP_BALBcJ_T0007715.1 MGP_BALBcJ_G0006309.1 mouse_genomes_project 3 141440547 141453903 + Gm33651 lincRNA lincRNA MGP_BALBcJ_T0001214.1 MGP_BALBcJ_G0001137.1 mouse_genomes_project 3 53029785 53032789 - TEC TEC MGP_BALBcJ_T0062194.1 MGP_BALBcJ_G0027525.1 mouse_genomes_project 3 92004164 92213983 - MGP_BALBcJ_P0062194 Tuft1 protein_coding protein_coding MGP_BALBcJ_T0062195.1 MGP_BALBcJ_G0027525.1 mouse_genomes_project 3 92004166 92213983 - MGP_BALBcJ_P0062195 Tuft1 protein_coding protein_coding MGP_BALBcJ_T0062196.1 MGP_BALBcJ_G0027525.1 mouse_genomes_project 3 92004403 92213983 - MGP_BALBcJ_P0062196 Tuft1 protein_coding protein_coding MGP_BALBcJ_T0062197.1 MGP_BALBcJ_G0027525.1 mouse_genomes_project 3 92005575 92006706 - Tuft1 protein_coding retained_intron MGP_BALBcJ_T0014347.1 MGP_BALBcJ_G0012444.1 mouse_genomes_project 3 144651804 144652661 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007560.1 MGP_BALBcJ_G0006186.1 mouse_genomes_project 3 78122200 78130231 + Gm42468 lincRNA lincRNA MGP_BALBcJ_T0007732.1 MGP_BALBcJ_G0006323.1 mouse_genomes_project 3 145059507 145090028 + Gm29771 lincRNA lincRNA MGP_BALBcJ_T0004291.1 MGP_BALBcJ_G0003764.1 mouse_genomes_project 3 94418446 94420717 - 4930442L01Rik antisense antisense MGP_BALBcJ_T0001164.1 MGP_BALBcJ_G0001089.1 mouse_genomes_project 3 42091796 42094377 - TEC TEC MGP_BALBcJ_T0064098.1 MGP_BALBcJ_G0027927.1 mouse_genomes_project 3 142925924 142955514 - MGP_BALBcJ_P0064098 Clca1 protein_coding protein_coding MGP_BALBcJ_T0064099.1 MGP_BALBcJ_G0027927.1 mouse_genomes_project 3 142926664 142931281 - Clca1 protein_coding processed_transcript MGP_BALBcJ_T0064100.1 MGP_BALBcJ_G0027927.1 mouse_genomes_project 3 142936068 142941482 - Clca1 protein_coding processed_transcript MGP_BALBcJ_T0064029.1 MGP_BALBcJ_G0027910.1 mouse_genomes_project 3 140315177 140354743 + MGP_BALBcJ_P0064029 Gbp5 protein_coding unknown_likely_coding MGP_BALBcJ_T0064030.1 MGP_BALBcJ_G0027910.1 mouse_genomes_project 3 140323029 140333562 + Gbp5 protein_coding processed_transcript MGP_BALBcJ_T0064031.1 MGP_BALBcJ_G0027910.1 mouse_genomes_project 3 140325252 140329803 + Gbp5 protein_coding retained_intron MGP_BALBcJ_T0007437.1 MGP_BALBcJ_G0006093.1 mouse_genomes_project 3 11844199 11868924 + A930001A20Rik lincRNA lincRNA MGP_BALBcJ_T0101022.1 MGP_BALBcJ_G0039058.1 mouse_genomes_project 3 23919794 23919908 + Gm25152 snoRNA snoRNA MGP_BALBcJ_T0010490.1 MGP_BALBcJ_G0008615.1 mouse_genomes_project 3 31743246 31743353 - Mir6378 miRNA miRNA MGP_BALBcJ_T0007613.1 MGP_BALBcJ_G0006226.1 mouse_genomes_project 3 99438192 99440047 + Gm43134 lincRNA lincRNA MGP_BALBcJ_T0062591.1 MGP_BALBcJ_G0027608.1 mouse_genomes_project 3 94498681 94679873 + MGP_BALBcJ_P0062591 Gja5 protein_coding protein_coding MGP_BALBcJ_T0062593.1 MGP_BALBcJ_G0027608.1 mouse_genomes_project 3 94630175 94648589 + MGP_BALBcJ_P0062593 Gja5 protein_coding protein_coding MGP_BALBcJ_T0062594.1 MGP_BALBcJ_G0027608.1 mouse_genomes_project 3 94630175 94651356 + MGP_BALBcJ_P0062594 Gja5 protein_coding protein_coding MGP_BALBcJ_T0064016.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140074076 140233488 - MGP_BALBcJ_P0064016 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064017.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140077160 140229763 - MGP_BALBcJ_P0064017 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064018.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140077160 140229763 - MGP_BALBcJ_P0064018 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064019.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140077160 140233373 - MGP_BALBcJ_P0064019 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064020.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140077160 140229763 - MGP_BALBcJ_P0064020 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064021.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140079267 140081355 - Pdlim5 protein_coding retained_intron MGP_BALBcJ_T0064022.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140084173 140141118 - MGP_BALBcJ_P0064022 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064023.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140084232 140141581 - MGP_BALBcJ_P0064023 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064024.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140138608 140229805 - MGP_BALBcJ_P0064024 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064025.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140138843 140233402 - MGP_BALBcJ_P0064025 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064026.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140138848 140229805 - MGP_BALBcJ_P0064026 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064027.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140140359 140233413 - MGP_BALBcJ_P0064027 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0064028.1 MGP_BALBcJ_G0027909.1 mouse_genomes_project 3 140140466 140233491 - MGP_BALBcJ_P0064028 Pdlim5 protein_coding protein_coding MGP_BALBcJ_T0061131.1 MGP_BALBcJ_G0027267.1 mouse_genomes_project 3 66297003 66298203 + MGP_BALBcJ_P0061131 Arl14 protein_coding protein_coding MGP_BALBcJ_T0062699.1 MGP_BALBcJ_G0027640.1 mouse_genomes_project 3 98234136 98361496 - MGP_BALBcJ_P0062699 Man1a2 protein_coding protein_coding MGP_BALBcJ_T0062700.1 MGP_BALBcJ_G0027640.1 mouse_genomes_project 3 98258481 98328748 - Man1a2 protein_coding processed_transcript MGP_BALBcJ_T0062701.1 MGP_BALBcJ_G0027640.1 mouse_genomes_project 3 98293193 98360605 - MGP_BALBcJ_P0062701 Man1a2 protein_coding protein_coding MGP_BALBcJ_T0062702.1 MGP_BALBcJ_G0027640.1 mouse_genomes_project 3 98320714 98361118 - MGP_BALBcJ_P0062702 Man1a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062703.1 MGP_BALBcJ_G0027640.1 mouse_genomes_project 3 98332216 98361301 - Man1a2 protein_coding processed_transcript MGP_BALBcJ_T0062704.1 MGP_BALBcJ_G0027640.1 mouse_genomes_project 3 98360585 98361452 - Man1a2 protein_coding processed_transcript MGP_BALBcJ_T0014185.1 MGP_BALBcJ_G0012282.1 mouse_genomes_project 3 96511863 96512049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061879.1 MGP_BALBcJ_G0027419.1 mouse_genomes_project 3 87000577 87010874 + MGP_BALBcJ_P0061879 Ube2q1 protein_coding protein_coding MGP_BALBcJ_T0061880.1 MGP_BALBcJ_G0027419.1 mouse_genomes_project 3 87000725 87004285 + Ube2q1 protein_coding retained_intron MGP_BALBcJ_T0007554.1 MGP_BALBcJ_G0006182.1 mouse_genomes_project 3 76425702 76426703 + 6430573P05Rik lincRNA lincRNA MGP_BALBcJ_T0007555.1 MGP_BALBcJ_G0006182.1 mouse_genomes_project 3 76425921 76428380 + 6430573P05Rik lincRNA lincRNA MGP_BALBcJ_T0007556.1 MGP_BALBcJ_G0006182.1 mouse_genomes_project 3 76426257 76427336 + 6430573P05Rik lincRNA lincRNA MGP_BALBcJ_T0063326.1 MGP_BALBcJ_G0027780.1 mouse_genomes_project 3 114359269 114378754 - MGP_BALBcJ_P0063326 Rtca protein_coding protein_coding MGP_BALBcJ_T0063327.1 MGP_BALBcJ_G0027780.1 mouse_genomes_project 3 114359546 114366517 - Rtca protein_coding retained_intron MGP_BALBcJ_T0063328.1 MGP_BALBcJ_G0027780.1 mouse_genomes_project 3 114364702 114378570 - MGP_BALBcJ_P0063328 Rtca protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063329.1 MGP_BALBcJ_G0027780.1 mouse_genomes_project 3 114366242 114378611 - MGP_BALBcJ_P0063329 Rtca protein_coding protein_coding MGP_BALBcJ_T0063330.1 MGP_BALBcJ_G0027780.1 mouse_genomes_project 3 114370097 114378679 - MGP_BALBcJ_P0063330 Rtca protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064218.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780098 146793098 - MGP_BALBcJ_P0064218 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064219.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780101 146919636 - MGP_BALBcJ_P0064219 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064220.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780366 146825166 - MGP_BALBcJ_P0064220 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064221.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780370 146787496 - MGP_BALBcJ_P0064221 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064222.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780586 146919600 - MGP_BALBcJ_P0064222 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064223.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780603 146955496 - MGP_BALBcJ_P0064223 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064224.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146780603 146955496 - MGP_BALBcJ_P0064224 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064225.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146781450 146919716 - MGP_BALBcJ_P0064225 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064226.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146781603 146919729 - MGP_BALBcJ_P0064226 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064227.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146781603 146919729 - MGP_BALBcJ_P0064227 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064228.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146781603 146919729 - MGP_BALBcJ_P0064228 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064229.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146781603 146919729 - MGP_BALBcJ_P0064229 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064230.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146782232 146798475 - MGP_BALBcJ_P0064230 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064231.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146782255 146799934 - MGP_BALBcJ_P0064231 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064232.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146782274 146790913 - MGP_BALBcJ_P0064232 Adgrl2 protein_coding protein_coding MGP_BALBcJ_T0064233.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146784836 146789691 - Adgrl2 protein_coding retained_intron MGP_BALBcJ_T0064234.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146791688 146800068 - Adgrl2 protein_coding retained_intron MGP_BALBcJ_T0064235.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146825321 146919577 - MGP_BALBcJ_P0064235 Adgrl2 protein_coding unknown_likely_coding MGP_BALBcJ_T0064236.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146853837 146954257 - Adgrl2 protein_coding retained_intron MGP_BALBcJ_T0064237.1 MGP_BALBcJ_G0027952.1 mouse_genomes_project 3 146918901 146954423 - Adgrl2 protein_coding retained_intron MGP_BALBcJ_T0062905.1 MGP_BALBcJ_G0027680.1 mouse_genomes_project 3 102494415 102504481 - MGP_BALBcJ_P0062905 Fam19a3 protein_coding protein_coding MGP_BALBcJ_T0062906.1 MGP_BALBcJ_G0027680.1 mouse_genomes_project 3 102504294 102508774 - Fam19a3 protein_coding processed_transcript MGP_BALBcJ_T0001325.1 MGP_BALBcJ_G0001248.1 mouse_genomes_project 3 124900145 124902633 - TEC TEC MGP_BALBcJ_T0001109.1 MGP_BALBcJ_G0001034.1 mouse_genomes_project 3 10115203 10118891 + TEC TEC MGP_BALBcJ_T0001234.1 MGP_BALBcJ_G0001157.1 mouse_genomes_project 3 66191928 66194910 - TEC TEC MGP_BALBcJ_T0007609.1 MGP_BALBcJ_G0006222.1 mouse_genomes_project 3 98106239 98107544 + Gm43121 lincRNA lincRNA MGP_BALBcJ_T0004279.1 MGP_BALBcJ_G0003758.1 mouse_genomes_project 3 92827140 92834936 - 6330562C20Rik antisense antisense MGP_BALBcJ_T0004280.1 MGP_BALBcJ_G0003758.1 mouse_genomes_project 3 92827727 92834985 - 6330562C20Rik antisense antisense MGP_BALBcJ_T0004281.1 MGP_BALBcJ_G0003758.1 mouse_genomes_project 3 92831251 92834995 - 6330562C20Rik antisense antisense MGP_BALBcJ_T0061885.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87168995 87193332 - MGP_BALBcJ_P0061885 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061886.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87168995 87190453 - MGP_BALBcJ_P0061886 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061887.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87169003 87183453 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061888.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87169673 87193103 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061889.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87170366 87193332 - MGP_BALBcJ_P0061889 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061890.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87170714 87173297 - MGP_BALBcJ_P0061890 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061891.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87173253 87175293 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061892.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87174717 87176002 - MGP_BALBcJ_P0061892 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061893.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87175569 87176085 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061894.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87175965 87176881 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061895.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87175992 87177955 - MGP_BALBcJ_P0061895 Atp8b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061896.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87176056 87178085 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061897.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87178097 87179998 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061898.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87183926 87184727 - Atp8b2 protein_coding retained_intron MGP_BALBcJ_T0061899.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87184357 87189378 - MGP_BALBcJ_P0061899 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061900.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87187831 87192938 - MGP_BALBcJ_P0061900 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0061901.1 MGP_BALBcJ_G0027422.1 mouse_genomes_project 3 87188377 87191639 - MGP_BALBcJ_P0061901 Atp8b2 protein_coding protein_coding MGP_BALBcJ_T0013957.1 MGP_BALBcJ_G0012054.1 mouse_genomes_project 3 30880930 30884665 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060688.1 MGP_BALBcJ_G0027167.1 mouse_genomes_project 3 48258526 48266853 - MGP_BALBcJ_P0060688 Mgarp protein_coding protein_coding MGP_BALBcJ_T0060689.1 MGP_BALBcJ_G0027167.1 mouse_genomes_project 3 48258526 48267043 - MGP_BALBcJ_P0060689 Mgarp protein_coding protein_coding MGP_BALBcJ_T0060690.1 MGP_BALBcJ_G0027167.1 mouse_genomes_project 3 48258526 48266831 - MGP_BALBcJ_P0060690 Mgarp protein_coding protein_coding MGP_BALBcJ_T0060691.1 MGP_BALBcJ_G0027167.1 mouse_genomes_project 3 48260929 48266808 - Mgarp protein_coding retained_intron MGP_BALBcJ_T0060692.1 MGP_BALBcJ_G0027167.1 mouse_genomes_project 3 48261370 48266793 - Mgarp protein_coding processed_transcript MGP_BALBcJ_T0001133.1 MGP_BALBcJ_G0001058.1 mouse_genomes_project 3 29916147 29918585 - TEC TEC MGP_BALBcJ_T0014241.1 MGP_BALBcJ_G0012338.1 mouse_genomes_project 3 110419252 110419645 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063131.1 MGP_BALBcJ_G0027739.1 mouse_genomes_project 3 105909338 105915899 - MGP_BALBcJ_P0063131 Gpr61 protein_coding protein_coding MGP_BALBcJ_T0063132.1 MGP_BALBcJ_G0027739.1 mouse_genomes_project 3 105909674 105915899 - MGP_BALBcJ_P0063132 Gpr61 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001387.1 MGP_BALBcJ_G0001309.1 mouse_genomes_project 3 154700578 154703146 + TEC TEC MGP_BALBcJ_T0010492.1 MGP_BALBcJ_G0008617.1 mouse_genomes_project 3 33380623 33380687 - Mir7009 miRNA miRNA MGP_BALBcJ_T0102493.1 MGP_BALBcJ_G0040309.1 mouse_genomes_project 3 104286949 104287372 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060867.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609310 54710092 + MGP_BALBcJ_P0060867 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060868.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609311 54649252 + MGP_BALBcJ_P0060868 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060869.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609323 54682544 + Rnf13 protein_coding processed_transcript MGP_BALBcJ_T0060870.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609330 54708749 + Rnf13 protein_coding processed_transcript MGP_BALBcJ_T0060871.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609330 54710094 + MGP_BALBcJ_P0060871 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060872.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609333 54701157 + MGP_BALBcJ_P0060872 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060873.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609361 54709980 + MGP_BALBcJ_P0060873 Rnf13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060874.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609368 54639018 + MGP_BALBcJ_P0060874 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060875.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609368 54673026 + MGP_BALBcJ_P0060875 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060876.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54609368 54708093 + MGP_BALBcJ_P0060876 Rnf13 protein_coding protein_coding MGP_BALBcJ_T0060877.1 MGP_BALBcJ_G0027205.1 mouse_genomes_project 3 54671319 54675192 + Rnf13 protein_coding retained_intron MGP_BALBcJ_T0062656.1 MGP_BALBcJ_G0027628.1 mouse_genomes_project 3 96175982 96223934 - MGP_BALBcJ_P0062656 protein_coding protein_coding MGP_BALBcJ_T0014251.1 MGP_BALBcJ_G0012348.1 mouse_genomes_project 3 113383079 113383905 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007482.1 MGP_BALBcJ_G0006129.1 mouse_genomes_project 3 34084263 34089972 + Gm12532 lincRNA lincRNA MGP_BALBcJ_T0062395.1 MGP_BALBcJ_G0027561.1 mouse_genomes_project 3 93188341 93192730 + MGP_BALBcJ_P0062395 Mcl1 protein_coding protein_coding MGP_BALBcJ_T0062396.1 MGP_BALBcJ_G0027561.1 mouse_genomes_project 3 93188410 93190377 + MGP_BALBcJ_P0062396 Mcl1 protein_coding protein_coding MGP_BALBcJ_T0014295.1 MGP_BALBcJ_G0012392.1 mouse_genomes_project 3 129290020 129290215 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060288.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683604 27706944 + Gpr160 protein_coding retained_intron MGP_BALBcJ_T0060289.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683604 27725225 + MGP_BALBcJ_P0060289 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0060290.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683604 27725225 + MGP_BALBcJ_P0060290 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0060291.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683604 27725227 + MGP_BALBcJ_P0060291 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0060292.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683643 27725225 + MGP_BALBcJ_P0060292 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0060293.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683647 27723827 + MGP_BALBcJ_P0060293 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0060294.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683669 27725225 + MGP_BALBcJ_P0060294 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0060295.1 MGP_BALBcJ_G0027100.1 mouse_genomes_project 3 27683797 27723856 + MGP_BALBcJ_P0060295 Gpr160 protein_coding protein_coding MGP_BALBcJ_T0098930.1 MGP_BALBcJ_G0036977.1 mouse_genomes_project 3 103518648 103520610 - Gm43330 sense_intronic sense_intronic MGP_BALBcJ_T0007615.1 MGP_BALBcJ_G0006228.1 mouse_genomes_project 3 99957022 100132417 + A230001M10Rik lincRNA lincRNA MGP_BALBcJ_T0007616.1 MGP_BALBcJ_G0006228.1 mouse_genomes_project 3 99957139 99983305 + A230001M10Rik lincRNA lincRNA MGP_BALBcJ_T0007617.1 MGP_BALBcJ_G0006228.1 mouse_genomes_project 3 99957455 99982510 + A230001M10Rik lincRNA lincRNA MGP_BALBcJ_T0014260.1 MGP_BALBcJ_G0012357.1 mouse_genomes_project 3 115781864 115782306 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014215.1 MGP_BALBcJ_G0012312.1 mouse_genomes_project 3 103696342 103703921 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007466.1 MGP_BALBcJ_G0006115.1 mouse_genomes_project 3 30674605 30705316 - 4930431L21Rik lincRNA lincRNA MGP_BALBcJ_T0007467.1 MGP_BALBcJ_G0006115.1 mouse_genomes_project 3 30678766 30679732 - 4930431L21Rik lincRNA lincRNA MGP_BALBcJ_T0004199.1 MGP_BALBcJ_G0003699.1 mouse_genomes_project 3 29445679 29448332 + Gm37640 antisense antisense MGP_BALBcJ_T0064122.1 MGP_BALBcJ_G0027930.1 mouse_genomes_project 3 143221477 143484099 + MGP_BALBcJ_P0064122 Col24a1 protein_coding protein_coding MGP_BALBcJ_T0064123.1 MGP_BALBcJ_G0027930.1 mouse_genomes_project 3 143221532 143242962 + MGP_BALBcJ_P0064123 Col24a1 protein_coding protein_coding MGP_BALBcJ_T0064124.1 MGP_BALBcJ_G0027930.1 mouse_genomes_project 3 143447391 143470731 + Col24a1 protein_coding processed_transcript MGP_BALBcJ_T0064125.1 MGP_BALBcJ_G0027930.1 mouse_genomes_project 3 143477059 143484094 + Col24a1 protein_coding retained_intron MGP_BALBcJ_T0014255.1 MGP_BALBcJ_G0012352.1 mouse_genomes_project 3 114721458 114721848 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014341.1 MGP_BALBcJ_G0012438.1 mouse_genomes_project 3 142627795 142628320 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010489.1 MGP_BALBcJ_G0008614.1 mouse_genomes_project 3 31447895 31447974 + Mir1897 miRNA miRNA MGP_BALBcJ_T0013936.1 MGP_BALBcJ_G0012033.1 mouse_genomes_project 3 18854844 18855277 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061080.1 MGP_BALBcJ_G0027256.1 mouse_genomes_project 3 64650579 64673342 + MGP_BALBcJ_P0061080 Mfsd1 protein_coding protein_coding MGP_BALBcJ_T0061081.1 MGP_BALBcJ_G0027256.1 mouse_genomes_project 3 64652585 64665308 + Mfsd1 protein_coding processed_transcript MGP_BALBcJ_T0064353.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882577 151932948 - MGP_BALBcJ_P0064353 Msh4 protein_coding protein_coding MGP_BALBcJ_T0064354.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882697 151901708 - Msh4 protein_coding retained_intron MGP_BALBcJ_T0064355.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882697 151906447 - Msh4 protein_coding retained_intron MGP_BALBcJ_T0064356.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882697 151890186 - Msh4 protein_coding processed_transcript MGP_BALBcJ_T0064357.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882697 151906447 - Msh4 protein_coding retained_intron MGP_BALBcJ_T0064358.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882697 151890212 - Msh4 protein_coding retained_intron MGP_BALBcJ_T0064359.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882697 151931541 - MGP_BALBcJ_P0064359 Msh4 protein_coding protein_coding MGP_BALBcJ_T0064360.1 MGP_BALBcJ_G0027969.1 mouse_genomes_project 3 151882701 151931701 - MGP_BALBcJ_P0064360 Msh4 protein_coding protein_coding MGP_BALBcJ_T0062909.1 MGP_BALBcJ_G0027682.1 mouse_genomes_project 3 102515909 102521396 + MGP_BALBcJ_P0062909 Rhoc protein_coding protein_coding MGP_BALBcJ_T0062910.1 MGP_BALBcJ_G0027682.1 mouse_genomes_project 3 102516161 102519911 + MGP_BALBcJ_P0062910 Rhoc protein_coding protein_coding MGP_BALBcJ_T0062911.1 MGP_BALBcJ_G0027682.1 mouse_genomes_project 3 102518916 102519814 + Rhoc protein_coding retained_intron MGP_BALBcJ_T0099719.1 MGP_BALBcJ_G0037755.1 mouse_genomes_project 3 5248215 5248322 + Gm24614 snRNA snRNA MGP_BALBcJ_T0063679.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127586009 127664029 - MGP_BALBcJ_P0063679 Egf protein_coding protein_coding MGP_BALBcJ_T0063680.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127586022 127633762 - MGP_BALBcJ_P0063680 Egf protein_coding protein_coding MGP_BALBcJ_T0063681.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127586024 127633752 - MGP_BALBcJ_P0063681 Egf protein_coding protein_coding MGP_BALBcJ_T0063682.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127586781 127590001 - Egf protein_coding retained_intron MGP_BALBcJ_T0063683.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127594705 127601472 - Egf protein_coding retained_intron MGP_BALBcJ_T0063684.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127600753 127603666 - Egf protein_coding retained_intron MGP_BALBcJ_T0063685.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127607849 127633761 - MGP_BALBcJ_P0063685 Egf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063686.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127644124 127664029 - Egf protein_coding retained_intron MGP_BALBcJ_T0063687.1 MGP_BALBcJ_G0027842.1 mouse_genomes_project 3 127645596 127664029 - Egf protein_coding processed_transcript MGP_BALBcJ_T0001184.1 MGP_BALBcJ_G0001109.1 mouse_genomes_project 3 48440740 48442851 - TEC TEC MGP_BALBcJ_T0060005.1 MGP_BALBcJ_G0027036.1 mouse_genomes_project 3 7026748 7031237 - MGP_BALBcJ_P0060005 Fabp4 protein_coding protein_coding MGP_BALBcJ_T0060006.1 MGP_BALBcJ_G0027036.1 mouse_genomes_project 3 7026988 7031219 - Fabp4 protein_coding retained_intron MGP_BALBcJ_T0063499.1 MGP_BALBcJ_G0027810.1 mouse_genomes_project 3 120441890 120467045 - MGP_BALBcJ_P0063499 Fnbp1l protein_coding protein_coding MGP_BALBcJ_T0063500.1 MGP_BALBcJ_G0027810.1 mouse_genomes_project 3 120441896 120522550 - MGP_BALBcJ_P0063500 Fnbp1l protein_coding protein_coding MGP_BALBcJ_T0063501.1 MGP_BALBcJ_G0027810.1 mouse_genomes_project 3 120445276 120522388 - MGP_BALBcJ_P0063501 Fnbp1l protein_coding protein_coding MGP_BALBcJ_T0063502.1 MGP_BALBcJ_G0027810.1 mouse_genomes_project 3 120451240 120458283 - Fnbp1l protein_coding retained_intron MGP_BALBcJ_T0063503.1 MGP_BALBcJ_G0027810.1 mouse_genomes_project 3 120461080 120462416 - Fnbp1l protein_coding retained_intron MGP_BALBcJ_T0060424.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32641213 32643119 + Atp11b protein_coding retained_intron MGP_BALBcJ_T0060425.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32641241 32716760 + Atp11b protein_coding processed_transcript MGP_BALBcJ_T0060426.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32641241 32744362 + Atp11b protein_coding retained_intron MGP_BALBcJ_T0060427.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32641241 32744367 + MGP_BALBcJ_P0060427 Atp11b protein_coding protein_coding MGP_BALBcJ_T0060428.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32675152 32694006 + MGP_BALBcJ_P0060428 Atp11b protein_coding protein_coding MGP_BALBcJ_T0060429.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32676643 32744365 + MGP_BALBcJ_P0060429 Atp11b protein_coding protein_coding MGP_BALBcJ_T0060430.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32694879 32697319 + Atp11b protein_coding processed_transcript MGP_BALBcJ_T0060431.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32714121 32716261 + Atp11b protein_coding retained_intron MGP_BALBcJ_T0060432.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32725832 32744362 + Atp11b protein_coding retained_intron MGP_BALBcJ_T0060433.1 MGP_BALBcJ_G0027123.1 mouse_genomes_project 3 32726165 32744367 + MGP_BALBcJ_P0060433 Atp11b protein_coding protein_coding MGP_BALBcJ_T0014136.1 MGP_BALBcJ_G0012233.1 mouse_genomes_project 3 84233027 84233974 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017931.1 MGP_BALBcJ_G0015449.1 mouse_genomes_project 3 91741574 91745910 - Gm36070 processed_transcript lincRNA MGP_BALBcJ_T0017932.1 MGP_BALBcJ_G0015449.1 mouse_genomes_project 3 91742393 91744280 - Gm36070 processed_transcript retained_intron MGP_BALBcJ_T0007522.1 MGP_BALBcJ_G0006157.1 mouse_genomes_project 3 50618327 50626419 + Gm43565 lincRNA lincRNA MGP_BALBcJ_T0061493.1 MGP_BALBcJ_G0027353.1 mouse_genomes_project 3 85281118 85293772 + MGP_BALBcJ_P0061493 Gpatch4 protein_coding protein_coding MGP_BALBcJ_T0061494.1 MGP_BALBcJ_G0027353.1 mouse_genomes_project 3 85281118 85293769 + MGP_BALBcJ_P0061494 Gpatch4 protein_coding protein_coding MGP_BALBcJ_T0061495.1 MGP_BALBcJ_G0027353.1 mouse_genomes_project 3 85281119 85292439 + Gpatch4 protein_coding retained_intron MGP_BALBcJ_T0061496.1 MGP_BALBcJ_G0027353.1 mouse_genomes_project 3 85281134 85292979 + MGP_BALBcJ_P0061496 Gpatch4 protein_coding protein_coding MGP_BALBcJ_T0061497.1 MGP_BALBcJ_G0027353.1 mouse_genomes_project 3 85281138 85293755 + MGP_BALBcJ_P0061497 Gpatch4 protein_coding protein_coding MGP_BALBcJ_T0001274.1 MGP_BALBcJ_G0001197.1 mouse_genomes_project 3 102384796 102387817 - TEC TEC MGP_BALBcJ_T0004348.1 MGP_BALBcJ_G0003798.1 mouse_genomes_project 3 124314488 124320890 - Gm17225 antisense antisense MGP_BALBcJ_T0004222.1 MGP_BALBcJ_G0003716.1 mouse_genomes_project 3 49941200 49944371 - Gm42901 antisense antisense MGP_BALBcJ_T0059984.1 MGP_BALBcJ_G0027028.1 mouse_genomes_project 3 5738375 5823774 - MGP_BALBcJ_P0059984 Tpd52 protein_coding protein_coding MGP_BALBcJ_T0059985.1 MGP_BALBcJ_G0027028.1 mouse_genomes_project 3 5739340 5823719 - MGP_BALBcJ_P0059985 Tpd52 protein_coding protein_coding MGP_BALBcJ_T0059986.1 MGP_BALBcJ_G0027028.1 mouse_genomes_project 3 5750589 5823774 - MGP_BALBcJ_P0059986 Tpd52 protein_coding protein_coding MGP_BALBcJ_T0059987.1 MGP_BALBcJ_G0027028.1 mouse_genomes_project 3 5753544 5823733 - Tpd52 protein_coding processed_transcript MGP_BALBcJ_T0059988.1 MGP_BALBcJ_G0027028.1 mouse_genomes_project 3 5753606 5823774 - MGP_BALBcJ_P0059988 Tpd52 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062921.1 MGP_BALBcJ_G0027684.1 mouse_genomes_project 3 102549343 102591683 - MGP_BALBcJ_P0062921 Capza1 protein_coding protein_coding MGP_BALBcJ_T0062922.1 MGP_BALBcJ_G0027684.1 mouse_genomes_project 3 102561069 102591578 - MGP_BALBcJ_P0062922 Capza1 protein_coding protein_coding MGP_BALBcJ_T0062923.1 MGP_BALBcJ_G0027684.1 mouse_genomes_project 3 102566948 102570012 - Capza1 protein_coding retained_intron MGP_BALBcJ_T0062924.1 MGP_BALBcJ_G0027684.1 mouse_genomes_project 3 102569372 102591551 - Capza1 protein_coding retained_intron MGP_BALBcJ_T0061807.1 MGP_BALBcJ_G0027404.1 mouse_genomes_project 3 86545951 86550590 - MGP_BALBcJ_P0061807 Efna4 protein_coding protein_coding MGP_BALBcJ_T0061664.1 MGP_BALBcJ_G0027382.1 mouse_genomes_project 3 86037690 86114585 + MGP_BALBcJ_P0061664 Gon4l protein_coding protein_coding MGP_BALBcJ_T0061665.1 MGP_BALBcJ_G0027382.1 mouse_genomes_project 3 86048800 86114585 + MGP_BALBcJ_P0061665 Gon4l protein_coding unknown_likely_coding MGP_BALBcJ_T0061666.1 MGP_BALBcJ_G0027382.1 mouse_genomes_project 3 86095477 86105721 + Gon4l protein_coding retained_intron MGP_BALBcJ_T0014073.1 MGP_BALBcJ_G0012170.1 mouse_genomes_project 3 64008285 64008607 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001268.1 MGP_BALBcJ_G0001191.1 mouse_genomes_project 3 94857367 94861164 + TEC TEC MGP_BALBcJ_T0004278.1 MGP_BALBcJ_G0003757.1 mouse_genomes_project 3 92735586 92746454 + Gm16740 antisense antisense MGP_BALBcJ_T0004300.1 MGP_BALBcJ_G0003770.1 mouse_genomes_project 3 99895986 99899006 + Gm16160 antisense antisense MGP_BALBcJ_T0062986.1 MGP_BALBcJ_G0027700.1 mouse_genomes_project 3 103757378 103765350 - MGP_BALBcJ_P0062986 Chil5 protein_coding protein_coding MGP_BALBcJ_T0062987.1 MGP_BALBcJ_G0027700.1 mouse_genomes_project 3 103757424 103765355 - MGP_BALBcJ_P0062987 Chil5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062988.1 MGP_BALBcJ_G0027700.1 mouse_genomes_project 3 103757591 103771932 - MGP_BALBcJ_P0062988 Chil5 protein_coding protein_coding MGP_BALBcJ_T0014196.1 MGP_BALBcJ_G0012293.1 mouse_genomes_project 3 98884026 98884566 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062530.1 MGP_BALBcJ_G0027594.1 mouse_genomes_project 3 94170533 94174008 + MGP_BALBcJ_P0062530 Ankrd34a protein_coding protein_coding MGP_BALBcJ_T0099784.1 MGP_BALBcJ_G0037820.1 mouse_genomes_project 3 108331928 108332033 - Gm26076 snRNA snRNA MGP_BALBcJ_T0063710.1 MGP_BALBcJ_G0027848.1 mouse_genomes_project 3 127815183 127828105 + MGP_BALBcJ_P0063710 Casp6 protein_coding protein_coding MGP_BALBcJ_T0063711.1 MGP_BALBcJ_G0027848.1 mouse_genomes_project 3 127815216 127822746 + Casp6 protein_coding processed_transcript MGP_BALBcJ_T0063712.1 MGP_BALBcJ_G0027848.1 mouse_genomes_project 3 127815259 127819173 + Casp6 protein_coding retained_intron MGP_BALBcJ_T0063713.1 MGP_BALBcJ_G0027848.1 mouse_genomes_project 3 127824463 127827603 + Casp6 protein_coding retained_intron MGP_BALBcJ_T0014124.1 MGP_BALBcJ_G0012221.1 mouse_genomes_project 3 79848052 79848632 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010510.1 MGP_BALBcJ_G0008635.1 mouse_genomes_project 3 85797380 85797462 - Mir1905 miRNA miRNA MGP_BALBcJ_T0061422.1 MGP_BALBcJ_G0027339.1 mouse_genomes_project 3 84973493 84985167 - MGP_BALBcJ_P0061422 Lrrc71 protein_coding protein_coding MGP_BALBcJ_T0061423.1 MGP_BALBcJ_G0027339.1 mouse_genomes_project 3 84974465 84985169 - Lrrc71 protein_coding retained_intron MGP_BALBcJ_T0061424.1 MGP_BALBcJ_G0027339.1 mouse_genomes_project 3 84974516 84975143 - Lrrc71 protein_coding processed_transcript MGP_BALBcJ_T0061425.1 MGP_BALBcJ_G0027339.1 mouse_genomes_project 3 84975556 84977631 - MGP_BALBcJ_P0061425 Lrrc71 protein_coding protein_coding MGP_BALBcJ_T0061426.1 MGP_BALBcJ_G0027339.1 mouse_genomes_project 3 84975651 84985008 - MGP_BALBcJ_P0061426 Lrrc71 protein_coding unknown_likely_coding MGP_BALBcJ_T0061427.1 MGP_BALBcJ_G0027339.1 mouse_genomes_project 3 84981828 84985138 - Lrrc71 protein_coding retained_intron MGP_BALBcJ_T0014198.1 MGP_BALBcJ_G0012295.1 mouse_genomes_project 3 98939283 98939843 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061780.1 MGP_BALBcJ_G0027398.1 mouse_genomes_project 3 86443060 86453894 - MGP_BALBcJ_P0061780 Trim46 protein_coding protein_coding MGP_BALBcJ_T0061781.1 MGP_BALBcJ_G0027398.1 mouse_genomes_project 3 86443060 86454790 - MGP_BALBcJ_P0061781 Trim46 protein_coding protein_coding MGP_BALBcJ_T0061782.1 MGP_BALBcJ_G0027398.1 mouse_genomes_project 3 86443060 86454080 - MGP_BALBcJ_P0061782 Trim46 protein_coding protein_coding MGP_BALBcJ_T0061783.1 MGP_BALBcJ_G0027398.1 mouse_genomes_project 3 86443718 86448229 - Trim46 protein_coding processed_transcript MGP_BALBcJ_T0061784.1 MGP_BALBcJ_G0027398.1 mouse_genomes_project 3 86443751 86454765 - MGP_BALBcJ_P0061784 Trim46 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061785.1 MGP_BALBcJ_G0027398.1 mouse_genomes_project 3 86453174 86455202 - MGP_BALBcJ_P0061785 Trim46 protein_coding protein_coding MGP_BALBcJ_T0014025.1 MGP_BALBcJ_G0012122.1 mouse_genomes_project 3 50563209 50563675 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013973.1 MGP_BALBcJ_G0012070.1 mouse_genomes_project 3 34225181 34225500 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014030.1 MGP_BALBcJ_G0012127.1 mouse_genomes_project 3 54021048 54022384 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007549.1 MGP_BALBcJ_G0006178.1 mouse_genomes_project 3 71148427 71157222 - Gm20356 lincRNA lincRNA MGP_BALBcJ_T0099758.1 MGP_BALBcJ_G0037794.1 mouse_genomes_project 3 86065341 86065503 + Gm23054 snRNA snRNA MGP_BALBcJ_T0098589.1 MGP_BALBcJ_G0036643.1 mouse_genomes_project 3 48704366 48704483 + n-R5s196 rRNA rRNA MGP_BALBcJ_T0007746.1 MGP_BALBcJ_G0006333.1 mouse_genomes_project 3 149305396 149307912 + 4930555A03Rik lincRNA lincRNA MGP_BALBcJ_T0007747.1 MGP_BALBcJ_G0006333.1 mouse_genomes_project 3 149305432 149307576 + 4930555A03Rik lincRNA lincRNA MGP_BALBcJ_T0007748.1 MGP_BALBcJ_G0006333.1 mouse_genomes_project 3 149305433 149306862 + 4930555A03Rik lincRNA lincRNA MGP_BALBcJ_T0007749.1 MGP_BALBcJ_G0006333.1 mouse_genomes_project 3 149306273 149307574 + 4930555A03Rik lincRNA lincRNA MGP_BALBcJ_T0101901.1 MGP_BALBcJ_G0039788.1 mouse_genomes_project 3 37663508 37664772 + transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0004381.1 MGP_BALBcJ_G0003822.1 mouse_genomes_project 3 143345767 143347779 - 9530034A14Rik antisense antisense MGP_BALBcJ_T0001227.1 MGP_BALBcJ_G0001150.1 mouse_genomes_project 3 62552886 62553835 - TEC TEC MGP_BALBcJ_T0004335.1 MGP_BALBcJ_G0003788.1 mouse_genomes_project 3 114219599 114222385 + Gm29151 antisense antisense MGP_BALBcJ_T0062037.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87786403 87792312 + MGP_BALBcJ_P0062037 S100a16 protein_coding protein_coding MGP_BALBcJ_T0062038.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87786464 87792178 + MGP_BALBcJ_P0062038 S100a16 protein_coding protein_coding MGP_BALBcJ_T0062039.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87786474 87791899 + S100a16 protein_coding processed_transcript MGP_BALBcJ_T0062040.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87788030 87792091 + MGP_BALBcJ_P0062040 S100a16 protein_coding protein_coding MGP_BALBcJ_T0062041.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87788432 87791593 + MGP_BALBcJ_P0062041 S100a16 protein_coding protein_coding MGP_BALBcJ_T0062042.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87790305 87791912 + MGP_BALBcJ_P0062042 S100a16 protein_coding protein_coding MGP_BALBcJ_T0062043.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87790308 87792026 + MGP_BALBcJ_P0062043 S100a16 protein_coding protein_coding MGP_BALBcJ_T0062044.1 MGP_BALBcJ_G0027444.1 mouse_genomes_project 3 87790320 87792315 + MGP_BALBcJ_P0062044 S100a16 protein_coding protein_coding MGP_BALBcJ_T0014312.1 MGP_BALBcJ_G0012409.1 mouse_genomes_project 3 133840355 133840655 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007523.1 MGP_BALBcJ_G0006158.1 mouse_genomes_project 3 50650045 50667032 + C820005J03Rik lincRNA lincRNA MGP_BALBcJ_T0063020.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104421559 104474063 + MGP_BALBcJ_P0063020 Lrif1 protein_coding protein_coding MGP_BALBcJ_T0063021.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104421570 104470356 + Lrif1 protein_coding processed_transcript MGP_BALBcJ_T0063022.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104459885 104470369 + MGP_BALBcJ_P0063022 Lrif1 protein_coding protein_coding MGP_BALBcJ_T0063023.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460050 104472541 + MGP_BALBcJ_P0063023 Lrif1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063024.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460050 104474736 + MGP_BALBcJ_P0063024 Lrif1 protein_coding protein_coding MGP_BALBcJ_T0063025.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460065 104470207 + MGP_BALBcJ_P0063025 Lrif1 protein_coding protein_coding MGP_BALBcJ_T0063026.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460082 104472777 + Lrif1 protein_coding retained_intron MGP_BALBcJ_T0063027.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460083 104464820 + Lrif1 protein_coding retained_intron MGP_BALBcJ_T0063028.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460083 104471745 + Lrif1 protein_coding processed_transcript MGP_BALBcJ_T0063029.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460093 104474733 + MGP_BALBcJ_P0063029 Lrif1 protein_coding protein_coding MGP_BALBcJ_T0063030.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104460124 104470221 + MGP_BALBcJ_P0063030 Lrif1 protein_coding protein_coding MGP_BALBcJ_T0063031.1 MGP_BALBcJ_G0027708.1 mouse_genomes_project 3 104471071 104471985 + Lrif1 protein_coding retained_intron MGP_BALBcJ_T0099729.1 MGP_BALBcJ_G0037765.1 mouse_genomes_project 3 42670854 42671017 + Gm25796 snRNA snRNA MGP_BALBcJ_T0099798.1 MGP_BALBcJ_G0037834.1 mouse_genomes_project 3 137262602 137262689 - Gm24260 snRNA snRNA MGP_BALBcJ_T0013886.1 MGP_BALBcJ_G0011983.1 mouse_genomes_project 3 5478481 5478794 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014100.1 MGP_BALBcJ_G0012197.1 mouse_genomes_project 3 71067471 71068548 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007756.1 MGP_BALBcJ_G0006339.1 mouse_genomes_project 3 154022614 154058601 + 9330178D15Rik lincRNA lincRNA MGP_BALBcJ_T0004336.1 MGP_BALBcJ_G0003789.1 mouse_genomes_project 3 114499959 114501788 - Gm42893 antisense antisense MGP_BALBcJ_T0001329.1 MGP_BALBcJ_G0001252.1 mouse_genomes_project 3 125129321 125132521 - TEC TEC MGP_BALBcJ_T0007685.1 MGP_BALBcJ_G0006283.1 mouse_genomes_project 3 131669406 131672561 - lincRNA lincRNA MGP_BALBcJ_T0063641.1 MGP_BALBcJ_G0027835.1 mouse_genomes_project 3 125581620 125685607 - MGP_BALBcJ_P0063641 Alpk1 protein_coding protein_coding MGP_BALBcJ_T0063642.1 MGP_BALBcJ_G0027835.1 mouse_genomes_project 3 125581620 125644518 - MGP_BALBcJ_P0063642 Alpk1 protein_coding protein_coding MGP_BALBcJ_T0063643.1 MGP_BALBcJ_G0027835.1 mouse_genomes_project 3 125581709 125685607 - Alpk1 protein_coding retained_intron MGP_BALBcJ_T0063644.1 MGP_BALBcJ_G0027835.1 mouse_genomes_project 3 125591233 125597978 - MGP_BALBcJ_P0063644 Alpk1 protein_coding protein_coding MGP_BALBcJ_T0063645.1 MGP_BALBcJ_G0027835.1 mouse_genomes_project 3 125639301 125685593 - Alpk1 protein_coding retained_intron MGP_BALBcJ_T0063646.1 MGP_BALBcJ_G0027835.1 mouse_genomes_project 3 125667263 125685570 - Alpk1 protein_coding processed_transcript MGP_BALBcJ_T0007471.1 MGP_BALBcJ_G0006119.1 mouse_genomes_project 3 31235563 31243288 - Gm20515 lincRNA lincRNA MGP_BALBcJ_T0004390.1 MGP_BALBcJ_G0003829.1 mouse_genomes_project 3 151862088 151877851 - Asb17os antisense antisense MGP_BALBcJ_T0004391.1 MGP_BALBcJ_G0003829.1 mouse_genomes_project 3 151875822 151877874 - Asb17os antisense antisense MGP_BALBcJ_T0004263.1 MGP_BALBcJ_G0003747.1 mouse_genomes_project 3 86605564 86612118 + Gm15417 antisense antisense MGP_BALBcJ_T0004264.1 MGP_BALBcJ_G0003747.1 mouse_genomes_project 3 86605684 86612118 + Gm15417 antisense antisense MGP_BALBcJ_T0004265.1 MGP_BALBcJ_G0003747.1 mouse_genomes_project 3 86608192 86612688 + Gm15417 antisense antisense MGP_BALBcJ_T0004266.1 MGP_BALBcJ_G0003747.1 mouse_genomes_project 3 86609898 86612040 + Gm15417 antisense antisense MGP_BALBcJ_T0060079.1 MGP_BALBcJ_G0027059.1 mouse_genomes_project 3 14836503 14837053 + MGP_BALBcJ_P0060079 Cypt12 protein_coding protein_coding MGP_BALBcJ_T0063769.1 MGP_BALBcJ_G0027860.1 mouse_genomes_project 3 129405985 129482264 + MGP_BALBcJ_P0063769 Papss1 protein_coding protein_coding MGP_BALBcJ_T0063770.1 MGP_BALBcJ_G0027860.1 mouse_genomes_project 3 129406082 129482263 + MGP_BALBcJ_P0063770 Papss1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063771.1 MGP_BALBcJ_G0027860.1 mouse_genomes_project 3 129406113 129482263 + MGP_BALBcJ_P0063771 Papss1 protein_coding protein_coding MGP_BALBcJ_T0063772.1 MGP_BALBcJ_G0027860.1 mouse_genomes_project 3 129406116 129482264 + MGP_BALBcJ_P0063772 Papss1 protein_coding protein_coding MGP_BALBcJ_T0063773.1 MGP_BALBcJ_G0027860.1 mouse_genomes_project 3 129406152 129423835 + MGP_BALBcJ_P0063773 Papss1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004365.1 MGP_BALBcJ_G0003811.1 mouse_genomes_project 3 133780090 133805917 + antisense antisense MGP_BALBcJ_T0004366.1 MGP_BALBcJ_G0003811.1 mouse_genomes_project 3 133805147 134053368 + antisense antisense MGP_BALBcJ_T0014028.1 MGP_BALBcJ_G0012125.1 mouse_genomes_project 3 51540398 51542095 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004361.1 MGP_BALBcJ_G0003809.1 mouse_genomes_project 3 131803914 132098129 - antisense antisense MGP_BALBcJ_T0004362.1 MGP_BALBcJ_G0003809.1 mouse_genomes_project 3 132010964 132098276 - antisense antisense MGP_BALBcJ_T0099773.1 MGP_BALBcJ_G0037809.1 mouse_genomes_project 3 93923290 93923455 - Rnu1b1 snRNA snRNA MGP_BALBcJ_T0007588.1 MGP_BALBcJ_G0006203.1 mouse_genomes_project 3 86994376 87000106 - 4632404H12Rik lincRNA lincRNA MGP_BALBcJ_T0007589.1 MGP_BALBcJ_G0006203.1 mouse_genomes_project 3 86994986 86999657 - 4632404H12Rik lincRNA lincRNA MGP_BALBcJ_T0064204.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144685192 144770758 - MGP_BALBcJ_P0064204 Prkacb protein_coding protein_coding MGP_BALBcJ_T0064205.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144685483 144727140 - MGP_BALBcJ_P0064205 Prkacb protein_coding protein_coding MGP_BALBcJ_T0064206.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144685483 144727660 - MGP_BALBcJ_P0064206 Prkacb protein_coding protein_coding MGP_BALBcJ_T0064207.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144685485 144738292 - MGP_BALBcJ_P0064207 Prkacb protein_coding protein_coding MGP_BALBcJ_T0064208.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144687946 144701037 - Prkacb protein_coding retained_intron MGP_BALBcJ_T0064209.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144703382 144746171 - MGP_BALBcJ_P0064209 Prkacb protein_coding protein_coding MGP_BALBcJ_T0064210.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144703382 144721449 - MGP_BALBcJ_P0064210 Prkacb protein_coding protein_coding MGP_BALBcJ_T0064211.1 MGP_BALBcJ_G0027950.1 mouse_genomes_project 3 144767315 144770788 - Prkacb protein_coding retained_intron MGP_BALBcJ_T0007618.1 MGP_BALBcJ_G0006229.1 mouse_genomes_project 3 100069773 100071555 + Gm43242 lincRNA lincRNA MGP_BALBcJ_T0063114.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105835146 105846640 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063115.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105835146 105847712 - MGP_BALBcJ_P0063115 Ampd2 protein_coding protein_coding MGP_BALBcJ_T0063116.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105835148 105847736 - MGP_BALBcJ_P0063116 Ampd2 protein_coding protein_coding MGP_BALBcJ_T0063117.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105835171 105846484 - MGP_BALBcJ_P0063117 Ampd2 protein_coding protein_coding MGP_BALBcJ_T0063118.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105835828 105836555 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063119.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105836448 105837517 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063120.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105837697 105838980 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063121.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105839552 105840794 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063122.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105839716 105841703 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063123.1 MGP_BALBcJ_G0027736.1 mouse_genomes_project 3 105841006 105846480 - Ampd2 protein_coding retained_intron MGP_BALBcJ_T0063004.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104236137 104281273 - MGP_BALBcJ_P0063004 Cept1 protein_coding protein_coding MGP_BALBcJ_T0063005.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104236860 104281053 - MGP_BALBcJ_P0063005 Cept1 protein_coding protein_coding MGP_BALBcJ_T0063006.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104236860 104281202 - MGP_BALBcJ_P0063006 Cept1 protein_coding protein_coding MGP_BALBcJ_T0063007.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104239131 104281170 - MGP_BALBcJ_P0063007 Cept1 protein_coding protein_coding MGP_BALBcJ_T0063008.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104253976 104281214 - MGP_BALBcJ_P0063008 Cept1 protein_coding protein_coding MGP_BALBcJ_T0063009.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104264800 104281189 - MGP_BALBcJ_P0063009 Cept1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063010.1 MGP_BALBcJ_G0027706.1 mouse_genomes_project 3 104272881 104281063 - MGP_BALBcJ_P0063010 Cept1 protein_coding protein_coding MGP_BALBcJ_T0007648.1 MGP_BALBcJ_G0006255.1 mouse_genomes_project 3 116327581 116328809 + Gm9916 lincRNA lincRNA MGP_BALBcJ_T0062481.1 MGP_BALBcJ_G0027574.1 mouse_genomes_project 3 93542272 93601159 - MGP_BALBcJ_P0062481 Vps45 protein_coding protein_coding MGP_BALBcJ_T0062482.1 MGP_BALBcJ_G0027574.1 mouse_genomes_project 3 93587823 93600523 - Vps45 protein_coding retained_intron MGP_BALBcJ_T0062483.1 MGP_BALBcJ_G0027574.1 mouse_genomes_project 3 93599579 93600412 - Vps45 protein_coding processed_transcript MGP_BALBcJ_T0004369.1 MGP_BALBcJ_G0003813.1 mouse_genomes_project 3 135731410 135733613 - Gm43087 antisense antisense MGP_BALBcJ_T0060036.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11385029 11427602 + MGP_BALBcJ_P0060036 Lrrcc1 protein_coding protein_coding MGP_BALBcJ_T0060037.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11385064 11423131 + MGP_BALBcJ_P0060037 Lrrcc1 protein_coding protein_coding MGP_BALBcJ_T0060038.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11385065 11420933 + MGP_BALBcJ_P0060038 Lrrcc1 protein_coding protein_coding MGP_BALBcJ_T0060039.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11385120 11416993 + MGP_BALBcJ_P0060039 Lrrcc1 protein_coding protein_coding MGP_BALBcJ_T0060040.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11385175 11406302 + MGP_BALBcJ_P0060040 Lrrcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060041.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11402945 11421236 + MGP_BALBcJ_P0060041 Lrrcc1 protein_coding protein_coding MGP_BALBcJ_T0060042.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11403021 11409302 + MGP_BALBcJ_P0060042 Lrrcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060043.1 MGP_BALBcJ_G0027046.1 mouse_genomes_project 3 11405208 11414155 + MGP_BALBcJ_P0060043 Lrrcc1 protein_coding protein_coding MGP_BALBcJ_T0101048.1 MGP_BALBcJ_G0039084.1 mouse_genomes_project 3 83305943 83306065 + Gm25188 snoRNA snoRNA MGP_BALBcJ_T0010512.1 MGP_BALBcJ_G0008637.1 mouse_genomes_project 3 87242065 87242123 - Mir7669 miRNA miRNA MGP_BALBcJ_T0014184.1 MGP_BALBcJ_G0012281.1 mouse_genomes_project 3 95861529 95862018 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001125.1 MGP_BALBcJ_G0001050.1 mouse_genomes_project 3 27316024 27316890 + TEC TEC MGP_BALBcJ_T0014160.1 MGP_BALBcJ_G0012257.1 mouse_genomes_project 3 90612707 90613533 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010481.1 MGP_BALBcJ_G0008606.1 mouse_genomes_project 3 23447825 23447952 - Gm25773 miRNA miRNA MGP_BALBcJ_T0004186.1 MGP_BALBcJ_G0003691.1 mouse_genomes_project 3 23159861 23161090 + A830092H15Rik antisense antisense MGP_BALBcJ_T0004187.1 MGP_BALBcJ_G0003691.1 mouse_genomes_project 3 23160662 23162083 + A830092H15Rik antisense antisense MGP_BALBcJ_T0004332.1 MGP_BALBcJ_G0003785.1 mouse_genomes_project 3 106775813 106777890 + Gm43221 antisense antisense MGP_BALBcJ_T0101016.1 MGP_BALBcJ_G0039052.1 mouse_genomes_project 3 4315533 4315650 - Gm23592 snoRNA snoRNA MGP_BALBcJ_T0099764.1 MGP_BALBcJ_G0037800.1 mouse_genomes_project 3 87797820 87797926 + Gm24593 snRNA snRNA MGP_BALBcJ_T0062615.1 MGP_BALBcJ_G0027614.1 mouse_genomes_project 3 95211523 95252988 + MGP_BALBcJ_P0062615 Fmo5 protein_coding unknown_likely_coding MGP_BALBcJ_T0062616.1 MGP_BALBcJ_G0027614.1 mouse_genomes_project 3 95230015 95231100 + Fmo5 protein_coding retained_intron MGP_BALBcJ_T0062617.1 MGP_BALBcJ_G0027614.1 mouse_genomes_project 3 95230050 95240170 + Fmo5 protein_coding processed_transcript MGP_BALBcJ_T0061285.1 MGP_BALBcJ_G0027305.1 mouse_genomes_project 3 80211180 80217381 + MGP_BALBcJ_P0061285 Fga protein_coding protein_coding MGP_BALBcJ_T0061286.1 MGP_BALBcJ_G0027305.1 mouse_genomes_project 3 80211319 80218745 + MGP_BALBcJ_P0061286 Fga protein_coding protein_coding MGP_BALBcJ_T0061553.1 MGP_BALBcJ_G0027365.1 mouse_genomes_project 3 85611590 85628121 + MGP_BALBcJ_P0061553 Paqr6 protein_coding unknown_likely_coding MGP_BALBcJ_T0061554.1 MGP_BALBcJ_G0027365.1 mouse_genomes_project 3 85611642 85625024 + MGP_BALBcJ_P0061554 Paqr6 protein_coding protein_coding MGP_BALBcJ_T0061555.1 MGP_BALBcJ_G0027365.1 mouse_genomes_project 3 85611647 85628229 + MGP_BALBcJ_P0061555 Paqr6 protein_coding protein_coding MGP_BALBcJ_T0061556.1 MGP_BALBcJ_G0027365.1 mouse_genomes_project 3 85611649 85624305 + Paqr6 protein_coding processed_transcript MGP_BALBcJ_T0061557.1 MGP_BALBcJ_G0027365.1 mouse_genomes_project 3 85611651 85612861 + Paqr6 protein_coding retained_intron MGP_BALBcJ_T0061558.1 MGP_BALBcJ_G0027365.1 mouse_genomes_project 3 85613780 85628229 + Paqr6 protein_coding retained_intron MGP_BALBcJ_T0007734.1 MGP_BALBcJ_G0006325.1 mouse_genomes_project 3 145382256 145386633 + Gm37041 lincRNA lincRNA MGP_BALBcJ_T0102454.1 MGP_BALBcJ_G0040270.1 mouse_genomes_project 3 18433760 18435459 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061501.1 MGP_BALBcJ_G0027356.1 mouse_genomes_project 3 85317707 85359295 + MGP_BALBcJ_P0061501 Iqgap3 protein_coding protein_coding MGP_BALBcJ_T0061502.1 MGP_BALBcJ_G0027356.1 mouse_genomes_project 3 85317756 85323239 + Iqgap3 protein_coding retained_intron MGP_BALBcJ_T0061503.1 MGP_BALBcJ_G0027356.1 mouse_genomes_project 3 85317764 85344593 + MGP_BALBcJ_P0061503 Iqgap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061504.1 MGP_BALBcJ_G0027356.1 mouse_genomes_project 3 85321836 85323232 + Iqgap3 protein_coding retained_intron MGP_BALBcJ_T0061505.1 MGP_BALBcJ_G0027356.1 mouse_genomes_project 3 85341136 85359291 + MGP_BALBcJ_P0061505 Iqgap3 protein_coding protein_coding MGP_BALBcJ_T0061506.1 MGP_BALBcJ_G0027356.1 mouse_genomes_project 3 85343318 85348551 + Iqgap3 protein_coding retained_intron MGP_BALBcJ_T0007622.1 MGP_BALBcJ_G0006233.1 mouse_genomes_project 3 102069082 102085541 - Gm5546 lincRNA lincRNA MGP_BALBcJ_T0059959.1 MGP_BALBcJ_G0027019.1 mouse_genomes_project 3 2406462 2422422 - MGP_BALBcJ_P0059959 Pex2 protein_coding protein_coding MGP_BALBcJ_T0059960.1 MGP_BALBcJ_G0027019.1 mouse_genomes_project 3 2406462 2422422 - MGP_BALBcJ_P0059960 Pex2 protein_coding protein_coding MGP_BALBcJ_T0059961.1 MGP_BALBcJ_G0027019.1 mouse_genomes_project 3 2406773 2410010 - MGP_BALBcJ_P0059961 Pex2 protein_coding protein_coding MGP_BALBcJ_T0059962.1 MGP_BALBcJ_G0027019.1 mouse_genomes_project 3 2406774 2422417 - MGP_BALBcJ_P0059962 Pex2 protein_coding protein_coding MGP_BALBcJ_T0059963.1 MGP_BALBcJ_G0027019.1 mouse_genomes_project 3 2406774 2422511 - MGP_BALBcJ_P0059963 Pex2 protein_coding protein_coding MGP_BALBcJ_T0059964.1 MGP_BALBcJ_G0027019.1 mouse_genomes_project 3 2406778 2422400 - MGP_BALBcJ_P0059964 Pex2 protein_coding protein_coding MGP_BALBcJ_T0101047.1 MGP_BALBcJ_G0039083.1 mouse_genomes_project 3 83153392 83153511 + Gm25876 snoRNA snoRNA MGP_BALBcJ_T0060015.1 MGP_BALBcJ_G0027039.1 mouse_genomes_project 3 7148779 7162837 - MGP_BALBcJ_P0060015 Gm38303 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063105.1 MGP_BALBcJ_G0027733.1 mouse_genomes_project 3 105727897 105739477 - MGP_BALBcJ_P0063105 Gstm2 protein_coding protein_coding MGP_BALBcJ_T0063106.1 MGP_BALBcJ_G0027733.1 mouse_genomes_project 3 105728142 105739384 - MGP_BALBcJ_P0063106 Gstm2 protein_coding protein_coding MGP_BALBcJ_T0063107.1 MGP_BALBcJ_G0027733.1 mouse_genomes_project 3 105738265 105739445 - Gstm2 protein_coding retained_intron MGP_BALBcJ_T0063108.1 MGP_BALBcJ_G0027733.1 mouse_genomes_project 3 105738500 105739445 - Gstm2 protein_coding retained_intron MGP_BALBcJ_T0004338.1 MGP_BALBcJ_G0003791.1 mouse_genomes_project 3 119421888 119426316 + A530020G20Rik antisense antisense MGP_BALBcJ_T0004339.1 MGP_BALBcJ_G0003791.1 mouse_genomes_project 3 119421898 119422753 + A530020G20Rik antisense antisense MGP_BALBcJ_T0004340.1 MGP_BALBcJ_G0003791.1 mouse_genomes_project 3 119421948 119423726 + A530020G20Rik antisense antisense MGP_BALBcJ_T0101681.1 MGP_BALBcJ_G0039670.1 mouse_genomes_project 3 52754377 52755341 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101682.1 MGP_BALBcJ_G0039670.1 mouse_genomes_project 3 52754536 52755673 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0062061.1 MGP_BALBcJ_G0027452.1 mouse_genomes_project 3 87924096 87925156 + MGP_BALBcJ_P0062061 S100a8 protein_coding protein_coding MGP_BALBcJ_T0062062.1 MGP_BALBcJ_G0027452.1 mouse_genomes_project 3 87924430 87925085 + S100a8 protein_coding retained_intron MGP_BALBcJ_T0098931.1 MGP_BALBcJ_G0036978.1 mouse_genomes_project 3 103523213 103524902 - Gm43331 sense_intronic sense_intronic MGP_BALBcJ_T0014183.1 MGP_BALBcJ_G0012280.1 mouse_genomes_project 3 95799598 95801609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014118.1 MGP_BALBcJ_G0012215.1 mouse_genomes_project 3 76724997 76725644 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013928.1 MGP_BALBcJ_G0012025.1 mouse_genomes_project 3 16654575 16654958 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099806.1 MGP_BALBcJ_G0037842.1 mouse_genomes_project 3 155416650 155416757 + Gm22458 snRNA snRNA MGP_BALBcJ_T0001371.1 MGP_BALBcJ_G0001293.1 mouse_genomes_project 3 149106975 149111354 - TEC TEC MGP_BALBcJ_T0014234.1 MGP_BALBcJ_G0012331.1 mouse_genomes_project 3 108331559 108331893 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063424.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119087892 119170286 - MGP_BALBcJ_P0063424 Tmem56 protein_coding protein_coding MGP_BALBcJ_T0063425.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119088139 119128323 - MGP_BALBcJ_P0063425 Tmem56 protein_coding unknown_likely_coding MGP_BALBcJ_T0063426.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119088139 119150304 - MGP_BALBcJ_P0063426 Tmem56 protein_coding protein_coding MGP_BALBcJ_T0063427.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119088139 119150278 - MGP_BALBcJ_P0063427 Tmem56 protein_coding protein_coding MGP_BALBcJ_T0063428.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119092169 119139913 - MGP_BALBcJ_P0063428 Tmem56 protein_coding protein_coding MGP_BALBcJ_T0063429.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119114656 119170286 - MGP_BALBcJ_P0063429 Tmem56 protein_coding protein_coding MGP_BALBcJ_T0063430.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119114700 119117856 - Tmem56 protein_coding retained_intron MGP_BALBcJ_T0063431.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119122004 119170183 - Tmem56 protein_coding processed_transcript MGP_BALBcJ_T0063432.1 MGP_BALBcJ_G0027798.1 mouse_genomes_project 3 119122057 119170190 - Tmem56 protein_coding processed_transcript MGP_BALBcJ_T0061793.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478490 86480768 - Slc50a1 protein_coding retained_intron MGP_BALBcJ_T0061794.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478490 86480771 - Slc50a1 protein_coding retained_intron MGP_BALBcJ_T0061795.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478490 86480740 - MGP_BALBcJ_P0061795 Slc50a1 protein_coding protein_coding MGP_BALBcJ_T0061796.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478490 86480815 - MGP_BALBcJ_P0061796 Slc50a1 protein_coding protein_coding MGP_BALBcJ_T0061797.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478490 86480724 - MGP_BALBcJ_P0061797 Slc50a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061798.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478492 86480770 - Slc50a1 protein_coding retained_intron MGP_BALBcJ_T0061799.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86478492 86480814 - Slc50a1 protein_coding retained_intron MGP_BALBcJ_T0061800.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86479315 86480815 - MGP_BALBcJ_P0061800 Slc50a1 protein_coding protein_coding MGP_BALBcJ_T0061801.1 MGP_BALBcJ_G0027401.1 mouse_genomes_project 3 86479389 86480472 - Slc50a1 protein_coding processed_transcript MGP_BALBcJ_T0063925.1 MGP_BALBcJ_G0027888.1 mouse_genomes_project 3 135719557 135771773 + MGP_BALBcJ_P0063925 Dnajb14 protein_coding protein_coding MGP_BALBcJ_T0063926.1 MGP_BALBcJ_G0027888.1 mouse_genomes_project 3 135719769 135751778 + Dnajb14 protein_coding retained_intron MGP_BALBcJ_T0063927.1 MGP_BALBcJ_G0027888.1 mouse_genomes_project 3 135720063 135757993 + MGP_BALBcJ_P0063927 Dnajb14 protein_coding protein_coding MGP_BALBcJ_T0063928.1 MGP_BALBcJ_G0027888.1 mouse_genomes_project 3 135760961 135764628 + Dnajb14 protein_coding retained_intron MGP_BALBcJ_T0060967.1 MGP_BALBcJ_G0027229.1 mouse_genomes_project 3 58294870 58301652 + MGP_BALBcJ_P0060967 Rap2b protein_coding protein_coding MGP_BALBcJ_T0099795.1 MGP_BALBcJ_G0037831.1 mouse_genomes_project 3 135569386 135569491 + Gm25080 snRNA snRNA MGP_BALBcJ_T0007539.1 MGP_BALBcJ_G0006169.1 mouse_genomes_project 3 64615595 64617657 - Gm35299 lincRNA lincRNA MGP_BALBcJ_T0098876.1 MGP_BALBcJ_G0036924.1 mouse_genomes_project 3 22501465 22506681 - Gm37573 sense_intronic sense_intronic MGP_BALBcJ_T0099808.1 MGP_BALBcJ_G0037844.1 mouse_genomes_project 3 157942911 157943018 - Gm23941 snRNA snRNA MGP_BALBcJ_T0014182.1 MGP_BALBcJ_G0012279.1 mouse_genomes_project 3 94725739 94726342 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062641.1 MGP_BALBcJ_G0027620.1 mouse_genomes_project 3 95770263 95771705 + MGP_BALBcJ_P0062641 Adam30 protein_coding protein_coding MGP_BALBcJ_T0062642.1 MGP_BALBcJ_G0027620.1 mouse_genomes_project 3 95770293 95773803 + MGP_BALBcJ_P0062642 Adam30 protein_coding protein_coding MGP_BALBcJ_T0059965.1 MGP_BALBcJ_G0027020.1 mouse_genomes_project 3 2590830 2591625 + MGP_BALBcJ_P0059965 Gm8797 protein_coding protein_coding MGP_BALBcJ_T0014235.1 MGP_BALBcJ_G0012332.1 mouse_genomes_project 3 108891205 108891522 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010524.1 MGP_BALBcJ_G0008649.1 mouse_genomes_project 3 101383783 101383869 - Gm25325 miRNA miRNA MGP_BALBcJ_T0061228.1 MGP_BALBcJ_G0027291.1 mouse_genomes_project 3 77023615 77086882 + MGP_BALBcJ_P0061228 Fam198b protein_coding protein_coding MGP_BALBcJ_T0061229.1 MGP_BALBcJ_G0027291.1 mouse_genomes_project 3 77023679 77077326 + MGP_BALBcJ_P0061229 Fam198b protein_coding protein_coding MGP_BALBcJ_T0061230.1 MGP_BALBcJ_G0027291.1 mouse_genomes_project 3 77024013 77025252 + MGP_BALBcJ_P0061230 Fam198b protein_coding protein_coding MGP_BALBcJ_T0061231.1 MGP_BALBcJ_G0027291.1 mouse_genomes_project 3 77024938 77086880 + MGP_BALBcJ_P0061231 Fam198b protein_coding protein_coding MGP_BALBcJ_T0061232.1 MGP_BALBcJ_G0027291.1 mouse_genomes_project 3 77025064 77028660 + Fam198b protein_coding retained_intron MGP_BALBcJ_T0101080.1 MGP_BALBcJ_G0039116.1 mouse_genomes_project 3 130618684 130618795 - Gm22322 snoRNA snoRNA MGP_BALBcJ_T0062198.1 MGP_BALBcJ_G0027526.1 mouse_genomes_project 3 92044172 92049382 + MGP_BALBcJ_P0062198 Gm10972 protein_coding protein_coding MGP_BALBcJ_T0062120.1 MGP_BALBcJ_G0027501.1 mouse_genomes_project 3 90357574 90359057 - MGP_BALBcJ_P0062120 Crct1 protein_coding protein_coding MGP_BALBcJ_T0062121.1 MGP_BALBcJ_G0027501.1 mouse_genomes_project 3 90357888 90359039 - MGP_BALBcJ_P0062121 Crct1 protein_coding protein_coding MGP_BALBcJ_T0062291.1 MGP_BALBcJ_G0027543.1 mouse_genomes_project 3 92649996 92652839 - MGP_BALBcJ_P0062291 Tnfaip8l2 protein_coding protein_coding MGP_BALBcJ_T0007611.1 MGP_BALBcJ_G0006224.1 mouse_genomes_project 3 98368757 98376259 + Gm43464 lincRNA lincRNA MGP_BALBcJ_T0007628.1 MGP_BALBcJ_G0006237.1 mouse_genomes_project 3 104563898 104614272 - Gm35507 lincRNA lincRNA MGP_BALBcJ_T0061370.1 MGP_BALBcJ_G0027326.1 mouse_genomes_project 3 83343870 83350262 - MGP_BALBcJ_P0061370 Rps3a1 protein_coding protein_coding MGP_BALBcJ_T0061371.1 MGP_BALBcJ_G0027326.1 mouse_genomes_project 3 83345576 83350171 - MGP_BALBcJ_P0061371 Rps3a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0059973.1 MGP_BALBcJ_G0027024.1 mouse_genomes_project 3 4384496 4429216 - MGP_BALBcJ_P0059973 Il7 protein_coding protein_coding MGP_BALBcJ_T0059974.1 MGP_BALBcJ_G0027024.1 mouse_genomes_project 3 4384590 4429777 - Il7 protein_coding processed_transcript MGP_BALBcJ_T0007496.1 MGP_BALBcJ_G0006139.1 mouse_genomes_project 3 37983762 37993373 - Gm42784 lincRNA lincRNA MGP_BALBcJ_T0001233.1 MGP_BALBcJ_G0001156.1 mouse_genomes_project 3 65488567 65495485 + TEC TEC MGP_BALBcJ_T0004229.1 MGP_BALBcJ_G0003721.1 mouse_genomes_project 3 52801417 52846162 + Gm43376 antisense antisense MGP_BALBcJ_T0004230.1 MGP_BALBcJ_G0003721.1 mouse_genomes_project 3 52801488 52803375 + Gm43376 antisense antisense MGP_BALBcJ_T0013894.1 MGP_BALBcJ_G0011991.1 mouse_genomes_project 3 7136115 7136294 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007542.1 MGP_BALBcJ_G0006172.1 mouse_genomes_project 3 65827541 65828697 + Gm35584 lincRNA lincRNA MGP_BALBcJ_T0011521.1 MGP_BALBcJ_G0009646.1 mouse_genomes_project 3 75971772 75972115 + Gm24749 misc_RNA misc_RNA MGP_BALBcJ_T0099724.1 MGP_BALBcJ_G0037760.1 mouse_genomes_project 3 21415373 21415480 + Gm24704 snRNA snRNA MGP_BALBcJ_T0001138.1 MGP_BALBcJ_G0001063.1 mouse_genomes_project 3 31452690 31455523 + TEC TEC MGP_BALBcJ_T0014360.1 MGP_BALBcJ_G0012457.1 mouse_genomes_project 3 152169151 152169488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064268.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240747 150267162 + MGP_BALBcJ_P0064268 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064269.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240798 150250824 + MGP_BALBcJ_P0064269 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064270.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240807 150263091 + MGP_BALBcJ_P0064270 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064271.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240817 150255191 + MGP_BALBcJ_P0064271 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064272.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240823 150263090 + MGP_BALBcJ_P0064272 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064273.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240839 150250040 + MGP_BALBcJ_P0064273 Fubp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064274.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240844 150266104 + MGP_BALBcJ_P0064274 Fubp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064275.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240844 150263090 + MGP_BALBcJ_P0064275 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064276.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150240846 150267162 + MGP_BALBcJ_P0064276 Fubp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064277.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150247755 150248829 + Fubp1 protein_coding retained_intron MGP_BALBcJ_T0064278.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150251687 150254459 + MGP_BALBcJ_P0064278 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064279.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150252209 150253305 + Fubp1 protein_coding retained_intron MGP_BALBcJ_T0064280.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150253622 150263091 + MGP_BALBcJ_P0064280 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064281.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150253635 150263108 + MGP_BALBcJ_P0064281 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064282.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150253645 150266170 + MGP_BALBcJ_P0064282 Fubp1 protein_coding protein_coding MGP_BALBcJ_T0064283.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150255052 150265738 + Fubp1 protein_coding retained_intron MGP_BALBcJ_T0064284.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150256195 150258566 + Fubp1 protein_coding retained_intron MGP_BALBcJ_T0064285.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150257629 150261629 + Fubp1 protein_coding retained_intron MGP_BALBcJ_T0064286.1 MGP_BALBcJ_G0027959.1 mouse_genomes_project 3 150258159 150262827 + Fubp1 protein_coding retained_intron MGP_BALBcJ_T0064014.1 MGP_BALBcJ_G0027908.1 mouse_genomes_project 3 139670818 139716360 - MGP_BALBcJ_P0064014 Bmpr1b protein_coding protein_coding MGP_BALBcJ_T0064015.1 MGP_BALBcJ_G0027908.1 mouse_genomes_project 3 139673996 139768272 - MGP_BALBcJ_P0064015 Bmpr1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001110.1 MGP_BALBcJ_G0001035.1 mouse_genomes_project 3 15180074 15184903 + TEC TEC MGP_BALBcJ_T0101083.1 MGP_BALBcJ_G0039119.1 mouse_genomes_project 3 141540040 141540165 + Gm24728 snoRNA snoRNA MGP_BALBcJ_T0061465.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85159700 85167011 - Rrnad1 protein_coding retained_intron MGP_BALBcJ_T0061466.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85159700 85167011 - MGP_BALBcJ_P0061466 Rrnad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061467.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160006 85167028 - MGP_BALBcJ_P0061467 Rrnad1 protein_coding protein_coding MGP_BALBcJ_T0061468.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160415 85166249 - Rrnad1 protein_coding retained_intron MGP_BALBcJ_T0061469.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160757 85165146 - MGP_BALBcJ_P0061469 Rrnad1 protein_coding protein_coding MGP_BALBcJ_T0061470.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160758 85162375 - Rrnad1 protein_coding processed_transcript MGP_BALBcJ_T0061471.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160762 85167028 - Rrnad1 protein_coding retained_intron MGP_BALBcJ_T0061472.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160762 85167601 - Rrnad1 protein_coding retained_intron MGP_BALBcJ_T0061473.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85160882 85167467 - MGP_BALBcJ_P0061473 Rrnad1 protein_coding protein_coding MGP_BALBcJ_T0061474.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85162152 85163980 - Rrnad1 protein_coding retained_intron MGP_BALBcJ_T0061475.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85162325 85164596 - Rrnad1 protein_coding processed_transcript MGP_BALBcJ_T0061476.1 MGP_BALBcJ_G0027347.1 mouse_genomes_project 3 85162355 85167022 - MGP_BALBcJ_P0061476 Rrnad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014148.1 MGP_BALBcJ_G0012245.1 mouse_genomes_project 3 88013427 88025307 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007570.1 MGP_BALBcJ_G0006195.1 mouse_genomes_project 3 81534993 81558750 - 4930565D16Rik lincRNA lincRNA MGP_BALBcJ_T0014171.1 MGP_BALBcJ_G0012268.1 mouse_genomes_project 3 92936322 92936722 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099774.1 MGP_BALBcJ_G0037810.1 mouse_genomes_project 3 94003105 94003270 + Gm24136 snRNA snRNA MGP_BALBcJ_T0102501.1 MGP_BALBcJ_G0040317.1 mouse_genomes_project 3 153546717 153547588 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0063994.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136783851 136933894 - MGP_BALBcJ_P0063994 Rap1gds1 protein_coding protein_coding MGP_BALBcJ_T0063995.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136783853 136933830 - MGP_BALBcJ_P0063995 Rap1gds1 protein_coding protein_coding MGP_BALBcJ_T0063996.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136783859 136933763 - MGP_BALBcJ_P0063996 Rap1gds1 protein_coding protein_coding MGP_BALBcJ_T0063997.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136800263 136933833 - MGP_BALBcJ_P0063997 Rap1gds1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063998.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136800266 136933841 - MGP_BALBcJ_P0063998 Rap1gds1 protein_coding protein_coding MGP_BALBcJ_T0063999.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136816646 136843820 - Rap1gds1 protein_coding retained_intron MGP_BALBcJ_T0064000.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136873669 136933886 - Rap1gds1 protein_coding retained_intron MGP_BALBcJ_T0064001.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136880946 136933491 - Rap1gds1 protein_coding processed_transcript MGP_BALBcJ_T0064002.1 MGP_BALBcJ_G0027904.1 mouse_genomes_project 3 136908522 136933833 - Rap1gds1 protein_coding retained_intron MGP_BALBcJ_T0099785.1 MGP_BALBcJ_G0037821.1 mouse_genomes_project 3 114318118 114318294 - Gm22361 snRNA snRNA MGP_BALBcJ_T0063042.1 MGP_BALBcJ_G0027716.1 mouse_genomes_project 3 104965601 104971453 - MGP_BALBcJ_P0063042 Prok1 protein_coding protein_coding MGP_BALBcJ_T0063043.1 MGP_BALBcJ_G0027716.1 mouse_genomes_project 3 104965614 104970062 - Prok1 protein_coding retained_intron MGP_BALBcJ_T0063044.1 MGP_BALBcJ_G0027716.1 mouse_genomes_project 3 104967932 104972508 - MGP_BALBcJ_P0063044 Prok1 protein_coding protein_coding MGP_BALBcJ_T0064261.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150208460 150240605 - Dnajb4 protein_coding processed_transcript MGP_BALBcJ_T0064262.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150213904 150224100 - MGP_BALBcJ_P0064262 Dnajb4 protein_coding protein_coding MGP_BALBcJ_T0064263.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150213931 150240409 - MGP_BALBcJ_P0064263 Dnajb4 protein_coding protein_coding MGP_BALBcJ_T0064264.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150215034 150240345 - MGP_BALBcJ_P0064264 Dnajb4 protein_coding protein_coding MGP_BALBcJ_T0064265.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150223631 150240383 - Dnajb4 protein_coding processed_transcript MGP_BALBcJ_T0064266.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150223817 150240383 - MGP_BALBcJ_P0064266 Dnajb4 protein_coding protein_coding MGP_BALBcJ_T0064267.1 MGP_BALBcJ_G0027958.1 mouse_genomes_project 3 150235714 150240628 - Dnajb4 protein_coding retained_intron MGP_BALBcJ_T0064392.1 MGP_BALBcJ_G0027974.1 mouse_genomes_project 3 152614622 152626697 - Tyw3 protein_coding processed_transcript MGP_BALBcJ_T0064393.1 MGP_BALBcJ_G0027974.1 mouse_genomes_project 3 152614855 152629188 - MGP_BALBcJ_P0064393 Tyw3 protein_coding protein_coding MGP_BALBcJ_T0064394.1 MGP_BALBcJ_G0027974.1 mouse_genomes_project 3 152619785 152629266 - MGP_BALBcJ_P0064394 Tyw3 protein_coding protein_coding MGP_BALBcJ_T0007469.1 MGP_BALBcJ_G0006117.1 mouse_genomes_project 3 31106051 31162120 - Gm38505 lincRNA lincRNA MGP_BALBcJ_T0014168.1 MGP_BALBcJ_G0012265.1 mouse_genomes_project 3 92048879 92049252 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099756.1 MGP_BALBcJ_G0037792.1 mouse_genomes_project 3 83583378 83583485 + Gm25039 snRNA snRNA MGP_BALBcJ_T0101018.1 MGP_BALBcJ_G0039054.1 mouse_genomes_project 3 7816091 7816209 - Gm22795 snoRNA snoRNA MGP_BALBcJ_T0014147.1 MGP_BALBcJ_G0012244.1 mouse_genomes_project 3 87977641 87978544 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061218.1 MGP_BALBcJ_G0027288.1 mouse_genomes_project 3 76773020 76776752 + MGP_BALBcJ_P0061218 4930579G24Rik protein_coding protein_coding MGP_BALBcJ_T0014067.1 MGP_BALBcJ_G0012164.1 mouse_genomes_project 3 63096957 63097893 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101051.1 MGP_BALBcJ_G0039087.1 mouse_genomes_project 3 83476189 83476320 - Gm26343 snoRNA snoRNA MGP_BALBcJ_T0001162.1 MGP_BALBcJ_G0001087.1 mouse_genomes_project 3 39385788 39386333 + TEC TEC MGP_BALBcJ_T0014108.1 MGP_BALBcJ_G0012205.1 mouse_genomes_project 3 74725670 74726941 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101071.1 MGP_BALBcJ_G0039107.1 mouse_genomes_project 3 113927332 113927464 - Gm26344 snoRNA snoRNA MGP_BALBcJ_T0007718.1 MGP_BALBcJ_G0006312.1 mouse_genomes_project 3 141535991 141576536 - Gm6260 lincRNA lincRNA MGP_BALBcJ_T0007719.1 MGP_BALBcJ_G0006312.1 mouse_genomes_project 3 141558763 141576603 - Gm6260 lincRNA lincRNA MGP_BALBcJ_T0060723.1 MGP_BALBcJ_G0027175.1 mouse_genomes_project 3 49881648 49916873 - MGP_BALBcJ_P0060723 Cog6 protein_coding protein_coding MGP_BALBcJ_T0060724.1 MGP_BALBcJ_G0027175.1 mouse_genomes_project 3 49881895 49894354 - Cog6 protein_coding retained_intron MGP_BALBcJ_T0060725.1 MGP_BALBcJ_G0027175.1 mouse_genomes_project 3 49884489 49916852 - MGP_BALBcJ_P0060725 Cog6 protein_coding protein_coding MGP_BALBcJ_T0060726.1 MGP_BALBcJ_G0027175.1 mouse_genomes_project 3 49893210 49916854 - MGP_BALBcJ_P0060726 Cog6 protein_coding protein_coding MGP_BALBcJ_T0060727.1 MGP_BALBcJ_G0027175.1 mouse_genomes_project 3 49895451 49916846 - Cog6 protein_coding retained_intron MGP_BALBcJ_T0060728.1 MGP_BALBcJ_G0027175.1 mouse_genomes_project 3 49909993 49916848 - Cog6 protein_coding retained_intron MGP_BALBcJ_T0004327.1 MGP_BALBcJ_G0003781.1 mouse_genomes_project 3 105846668 105849096 + Gm12500 antisense antisense MGP_BALBcJ_T0004328.1 MGP_BALBcJ_G0003781.1 mouse_genomes_project 3 105847060 105849094 + Gm12500 antisense antisense MGP_BALBcJ_T0001336.1 MGP_BALBcJ_G0001259.1 mouse_genomes_project 3 125956845 125958817 + TEC TEC MGP_BALBcJ_T0001337.1 MGP_BALBcJ_G0001259.1 mouse_genomes_project 3 125956846 125958817 + TEC TEC MGP_BALBcJ_T0099778.1 MGP_BALBcJ_G0037814.1 mouse_genomes_project 3 101813153 101813255 + Gm23830 snRNA snRNA MGP_BALBcJ_T0061362.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83176951 83289306 + Sh3d19 protein_coding processed_transcript MGP_BALBcJ_T0061364.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83244218 83289062 + Sh3d19 protein_coding processed_transcript MGP_BALBcJ_T0061365.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83245956 83289350 + Sh3d19 protein_coding processed_transcript MGP_BALBcJ_T0061366.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83246064 83289339 + Sh3d19 protein_coding processed_transcript MGP_BALBcJ_T0061367.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83276683 83336461 + MGP_BALBcJ_P0061367 Sh3d19 protein_coding protein_coding MGP_BALBcJ_T0061368.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83290201 83336457 + MGP_BALBcJ_P0061368 Sh3d19 protein_coding protein_coding MGP_BALBcJ_T0061369.1 MGP_BALBcJ_G0027324.1 mouse_genomes_project 3 83330729 83335045 + Sh3d19 protein_coding retained_intron MGP_BALBcJ_T0007683.1 MGP_BALBcJ_G0006281.1 mouse_genomes_project 3 131482282 131506207 - Gm42563 lincRNA lincRNA MGP_BALBcJ_T0001309.1 MGP_BALBcJ_G0001232.1 mouse_genomes_project 3 121120879 121123439 - TEC TEC MGP_BALBcJ_T0063652.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125713194 125743439 - MGP_BALBcJ_P0063652 Ap1ar protein_coding protein_coding MGP_BALBcJ_T0063653.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125713199 125743427 - MGP_BALBcJ_P0063653 Ap1ar protein_coding protein_coding MGP_BALBcJ_T0063654.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125713453 125715391 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063655.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125718710 125719345 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063656.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125719921 125724057 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063657.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125722083 125723746 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063658.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125726110 125731978 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063659.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125727164 125743147 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063660.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125727165 125729116 - Ap1ar protein_coding retained_intron MGP_BALBcJ_T0063661.1 MGP_BALBcJ_G0027837.1 mouse_genomes_project 3 125727200 125743172 - MGP_BALBcJ_P0063661 Ap1ar protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014006.1 MGP_BALBcJ_G0012103.1 mouse_genomes_project 3 46151261 46151617 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063050.1 MGP_BALBcJ_G0027719.1 mouse_genomes_project 3 105059832 105068359 - MGP_BALBcJ_P0063050 Rbm15 protein_coding protein_coding MGP_BALBcJ_T0063051.1 MGP_BALBcJ_G0027719.1 mouse_genomes_project 3 105061542 105067787 - Rbm15 protein_coding retained_intron MGP_BALBcJ_T0101032.1 MGP_BALBcJ_G0039068.1 mouse_genomes_project 3 46431685 46431813 + Gm22480 snoRNA snoRNA MGP_BALBcJ_T0014319.1 MGP_BALBcJ_G0012416.1 mouse_genomes_project 3 135760740 135761098 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010487.1 MGP_BALBcJ_G0008612.1 mouse_genomes_project 3 27869018 27869081 + Mir7008 miRNA miRNA MGP_BALBcJ_T0014090.1 MGP_BALBcJ_G0012187.1 mouse_genomes_project 3 67208660 67208940 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010506.1 MGP_BALBcJ_G0008631.1 mouse_genomes_project 3 85456044 85456131 + Mir3093 miRNA miRNA MGP_BALBcJ_T0061147.1 MGP_BALBcJ_G0027272.1 mouse_genomes_project 3 67094876 67116505 + MGP_BALBcJ_P0061147 Otol1 protein_coding protein_coding MGP_BALBcJ_T0013974.1 MGP_BALBcJ_G0012071.1 mouse_genomes_project 3 34455691 34456012 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060108.1 MGP_BALBcJ_G0027068.1 mouse_genomes_project 3 16576289 16578285 - MGP_BALBcJ_P0060108 Crh protein_coding protein_coding MGP_BALBcJ_T0061219.1 MGP_BALBcJ_G0027289.1 mouse_genomes_project 3 76778965 76881276 - MGP_BALBcJ_P0061219 Rxfp1 protein_coding protein_coding MGP_BALBcJ_T0061220.1 MGP_BALBcJ_G0027289.1 mouse_genomes_project 3 76781464 76881362 - MGP_BALBcJ_P0061220 Rxfp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061221.1 MGP_BALBcJ_G0027289.1 mouse_genomes_project 3 76792106 76793989 - Rxfp1 protein_coding retained_intron MGP_BALBcJ_T0061222.1 MGP_BALBcJ_G0027289.1 mouse_genomes_project 3 76795770 76808454 - Rxfp1 protein_coding processed_transcript MGP_BALBcJ_T0007468.1 MGP_BALBcJ_G0006116.1 mouse_genomes_project 3 30820917 30823195 - Gm43077 lincRNA lincRNA MGP_BALBcJ_T0014079.1 MGP_BALBcJ_G0012176.1 mouse_genomes_project 3 65912280 65913437 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001137.1 MGP_BALBcJ_G0001062.1 mouse_genomes_project 3 30874139 30879477 + TEC TEC MGP_BALBcJ_T0060369.1 MGP_BALBcJ_G0027115.1 mouse_genomes_project 3 29578585 29590453 + MGP_BALBcJ_P0060369 Ndufb5 protein_coding protein_coding MGP_BALBcJ_T0060370.1 MGP_BALBcJ_G0027115.1 mouse_genomes_project 3 29578590 29581715 + Ndufb5 protein_coding retained_intron MGP_BALBcJ_T0060371.1 MGP_BALBcJ_G0027115.1 mouse_genomes_project 3 29578596 29593118 + MGP_BALBcJ_P0060371 Ndufb5 protein_coding protein_coding MGP_BALBcJ_T0060372.1 MGP_BALBcJ_G0027115.1 mouse_genomes_project 3 29578620 29592799 + MGP_BALBcJ_P0060372 Ndufb5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060373.1 MGP_BALBcJ_G0027115.1 mouse_genomes_project 3 29578621 29590024 + MGP_BALBcJ_P0060373 Ndufb5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060374.1 MGP_BALBcJ_G0027115.1 mouse_genomes_project 3 29583107 29592655 + MGP_BALBcJ_P0060374 Ndufb5 protein_coding protein_coding MGP_BALBcJ_T0061391.1 MGP_BALBcJ_G0027330.1 mouse_genomes_project 3 84196252 84201198 + MGP_BALBcJ_P0061391 protein_coding protein_coding MGP_BALBcJ_T0013933.1 MGP_BALBcJ_G0012030.1 mouse_genomes_project 3 17661769 17661979 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062575.1 MGP_BALBcJ_G0027605.1 mouse_genomes_project 3 94385396 94417972 - MGP_BALBcJ_P0062575 Cd160 protein_coding protein_coding MGP_BALBcJ_T0062576.1 MGP_BALBcJ_G0027605.1 mouse_genomes_project 3 94385396 94417972 - MGP_BALBcJ_P0062576 Cd160 protein_coding protein_coding MGP_BALBcJ_T0062577.1 MGP_BALBcJ_G0027605.1 mouse_genomes_project 3 94386788 94401795 - MGP_BALBcJ_P0062577 Cd160 protein_coding protein_coding MGP_BALBcJ_T0098889.1 MGP_BALBcJ_G0036936.1 mouse_genomes_project 3 98169806 98172503 + Gm42868 sense_intronic sense_intronic MGP_BALBcJ_T0061976.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87497711 87507674 + MGP_BALBcJ_P0061976 Crtc2 protein_coding protein_coding MGP_BALBcJ_T0061977.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87497844 87507669 + Crtc2 protein_coding retained_intron MGP_BALBcJ_T0061978.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87497844 87507669 + Crtc2 protein_coding retained_intron MGP_BALBcJ_T0061979.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87497872 87502182 + Crtc2 protein_coding retained_intron MGP_BALBcJ_T0061980.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87497889 87507669 + Crtc2 protein_coding processed_transcript MGP_BALBcJ_T0061981.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87500841 87507669 + MGP_BALBcJ_P0061981 Crtc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061982.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87501597 87503041 + Crtc2 protein_coding retained_intron MGP_BALBcJ_T0061983.1 MGP_BALBcJ_G0027432.1 mouse_genomes_project 3 87502513 87503870 + Crtc2 protein_coding retained_intron MGP_BALBcJ_T0007716.1 MGP_BALBcJ_G0006310.1 mouse_genomes_project 3 141468539 141489670 + Gm42703 lincRNA lincRNA MGP_BALBcJ_T0062517.1 MGP_BALBcJ_G0027589.1 mouse_genomes_project 3 94015123 94023538 - MGP_BALBcJ_P0062517 BC107364 protein_coding protein_coding MGP_BALBcJ_T0062518.1 MGP_BALBcJ_G0027589.1 mouse_genomes_project 3 94015123 94023538 - MGP_BALBcJ_P0062518 BC107364 protein_coding protein_coding MGP_BALBcJ_T0001252.1 MGP_BALBcJ_G0001175.1 mouse_genomes_project 3 86001134 86002082 - TEC TEC MGP_BALBcJ_T0060109.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837417 16872946 + MGP_BALBcJ_P0060109 Cp protein_coding protein_coding MGP_BALBcJ_T0060110.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837417 16888677 + MGP_BALBcJ_P0060110 Cp protein_coding protein_coding MGP_BALBcJ_T0060111.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837424 16849168 + Cp protein_coding retained_intron MGP_BALBcJ_T0060112.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837432 16890203 + MGP_BALBcJ_P0060112 Cp protein_coding protein_coding MGP_BALBcJ_T0060113.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837474 16888677 + MGP_BALBcJ_P0060113 Cp protein_coding protein_coding MGP_BALBcJ_T0060114.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837582 16848836 + Cp protein_coding retained_intron MGP_BALBcJ_T0060115.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16837647 16872333 + MGP_BALBcJ_P0060115 Cp protein_coding protein_coding MGP_BALBcJ_T0060116.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16849672 16868873 + Cp protein_coding retained_intron MGP_BALBcJ_T0060117.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16850715 16854884 + Cp protein_coding retained_intron MGP_BALBcJ_T0060118.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16854590 16860549 + Cp protein_coding retained_intron MGP_BALBcJ_T0060119.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16860435 16867204 + MGP_BALBcJ_P0060119 Cp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060120.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16861235 16863295 + Cp protein_coding retained_intron MGP_BALBcJ_T0060121.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16861810 16865711 + MGP_BALBcJ_P0060121 Cp protein_coding protein_coding MGP_BALBcJ_T0060122.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16865419 16872390 + MGP_BALBcJ_P0060122 Cp protein_coding protein_coding MGP_BALBcJ_T0060123.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16867352 16869435 + Cp protein_coding retained_intron MGP_BALBcJ_T0060124.1 MGP_BALBcJ_G0027069.1 mouse_genomes_project 3 16868959 16887426 + MGP_BALBcJ_P0060124 Cp protein_coding protein_coding MGP_BALBcJ_T0061970.1 MGP_BALBcJ_G0027430.1 mouse_genomes_project 3 87473523 87477756 + MGP_BALBcJ_P0061970 Jtb protein_coding protein_coding MGP_BALBcJ_T0061971.1 MGP_BALBcJ_G0027430.1 mouse_genomes_project 3 87473538 87477461 + MGP_BALBcJ_P0061971 Jtb protein_coding protein_coding MGP_BALBcJ_T0061972.1 MGP_BALBcJ_G0027430.1 mouse_genomes_project 3 87473560 87477336 + Jtb protein_coding retained_intron MGP_BALBcJ_T0061973.1 MGP_BALBcJ_G0027430.1 mouse_genomes_project 3 87473973 87475862 + Jtb protein_coding retained_intron MGP_BALBcJ_T0098920.1 MGP_BALBcJ_G0036967.1 mouse_genomes_project 3 102217459 102219747 - A530041M06Rik sense_intronic sense_intronic MGP_BALBcJ_T0061883.1 MGP_BALBcJ_G0027421.1 mouse_genomes_project 3 87091729 87141287 - MGP_BALBcJ_P0061883 Il6ra protein_coding protein_coding MGP_BALBcJ_T0061884.1 MGP_BALBcJ_G0027421.1 mouse_genomes_project 3 87096656 87141253 - MGP_BALBcJ_P0061884 Il6ra protein_coding protein_coding MGP_BALBcJ_T0063178.1 MGP_BALBcJ_G0027750.1 mouse_genomes_project 3 106217583 106299686 - MGP_BALBcJ_P0063178 5330417C22Rik protein_coding protein_coding MGP_BALBcJ_T0063179.1 MGP_BALBcJ_G0027750.1 mouse_genomes_project 3 106219965 106299762 - MGP_BALBcJ_P0063179 5330417C22Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063180.1 MGP_BALBcJ_G0027750.1 mouse_genomes_project 3 106220071 106299766 - MGP_BALBcJ_P0063180 5330417C22Rik protein_coding protein_coding MGP_BALBcJ_T0063181.1 MGP_BALBcJ_G0027750.1 mouse_genomes_project 3 106227016 106228437 - 5330417C22Rik protein_coding retained_intron MGP_BALBcJ_T0063182.1 MGP_BALBcJ_G0027750.1 mouse_genomes_project 3 106231232 106233559 - 5330417C22Rik protein_coding retained_intron MGP_BALBcJ_T0063183.1 MGP_BALBcJ_G0027750.1 mouse_genomes_project 3 106255357 106299697 - 5330417C22Rik protein_coding retained_intron MGP_BALBcJ_T0004207.1 MGP_BALBcJ_G0003704.1 mouse_genomes_project 3 32888014 32895099 + Mccc1os antisense antisense MGP_BALBcJ_T0004208.1 MGP_BALBcJ_G0003704.1 mouse_genomes_project 3 32888094 32897769 + Mccc1os antisense antisense MGP_BALBcJ_T0004209.1 MGP_BALBcJ_G0003704.1 mouse_genomes_project 3 32888616 32914347 + Mccc1os antisense antisense MGP_BALBcJ_T0001160.1 MGP_BALBcJ_G0001085.1 mouse_genomes_project 3 38596496 38599092 + TEC TEC MGP_BALBcJ_T0062142.1 MGP_BALBcJ_G0027514.1 mouse_genomes_project 3 91694932 91717486 + MGP_BALBcJ_P0062142 Them4 protein_coding protein_coding MGP_BALBcJ_T0062143.1 MGP_BALBcJ_G0027514.1 mouse_genomes_project 3 91694973 91703002 + Them4 protein_coding retained_intron MGP_BALBcJ_T0062144.1 MGP_BALBcJ_G0027514.1 mouse_genomes_project 3 91694979 91710866 + Them4 protein_coding retained_intron MGP_BALBcJ_T0102468.1 MGP_BALBcJ_G0040284.1 mouse_genomes_project 3 67674699 67675734 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014192.1 MGP_BALBcJ_G0012289.1 mouse_genomes_project 3 97765136 97765304 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061317.1 MGP_BALBcJ_G0027314.1 mouse_genomes_project 3 81357503 81358531 + MGP_BALBcJ_P0061317 Gm6525 protein_coding protein_coding MGP_BALBcJ_T0007596.1 MGP_BALBcJ_G0006209.1 mouse_genomes_project 3 91795306 91798831 - 1700040D17Rik lincRNA lincRNA MGP_BALBcJ_T0064322.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150418042 150482030 + MGP_BALBcJ_P0064322 Zzz3 protein_coding protein_coding MGP_BALBcJ_T0064323.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150418094 150450520 + Zzz3 protein_coding retained_intron MGP_BALBcJ_T0064324.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150418572 150485550 + MGP_BALBcJ_P0064324 Zzz3 protein_coding protein_coding MGP_BALBcJ_T0064325.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150418601 150471831 + Zzz3 protein_coding processed_transcript MGP_BALBcJ_T0064326.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150418648 150471529 + Zzz3 protein_coding processed_transcript MGP_BALBcJ_T0064327.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150418700 150482108 + MGP_BALBcJ_P0064327 Zzz3 protein_coding protein_coding MGP_BALBcJ_T0064328.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150419247 150482033 + MGP_BALBcJ_P0064328 Zzz3 protein_coding protein_coding MGP_BALBcJ_T0064329.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150419257 150485550 + MGP_BALBcJ_P0064329 Zzz3 protein_coding protein_coding MGP_BALBcJ_T0064330.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150458543 150461798 + Zzz3 protein_coding retained_intron MGP_BALBcJ_T0064331.1 MGP_BALBcJ_G0027963.1 mouse_genomes_project 3 150479968 150481374 + Zzz3 protein_coding processed_transcript MGP_BALBcJ_T0001256.1 MGP_BALBcJ_G0001179.1 mouse_genomes_project 3 89555690 89612529 - TEC TEC MGP_BALBcJ_T0004393.1 MGP_BALBcJ_G0003831.1 mouse_genomes_project 3 152742510 152745203 - Gm20389 antisense antisense MGP_BALBcJ_T0013948.1 MGP_BALBcJ_G0012045.1 mouse_genomes_project 3 26586210 26586349 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060942.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57386031 57517525 + MGP_BALBcJ_P0060942 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060943.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57386243 57525701 + MGP_BALBcJ_P0060943 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060944.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57386269 57390327 + Mbnl1 protein_coding retained_intron MGP_BALBcJ_T0060945.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57386275 57543374 + MGP_BALBcJ_P0060945 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060946.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57386278 57517510 + MGP_BALBcJ_P0060946 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060947.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410475 57468918 + Mbnl1 protein_coding processed_transcript MGP_BALBcJ_T0060948.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410719 57551686 + MGP_BALBcJ_P0060948 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060949.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410760 57519862 + Mbnl1 protein_coding retained_intron MGP_BALBcJ_T0060950.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410777 57549473 + Mbnl1 protein_coding processed_transcript MGP_BALBcJ_T0060951.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410805 57468896 + Mbnl1 protein_coding processed_transcript MGP_BALBcJ_T0060952.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410805 57441584 + Mbnl1 protein_coding retained_intron MGP_BALBcJ_T0060953.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57410818 57551667 + MGP_BALBcJ_P0060953 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060954.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57438003 57438999 + Mbnl1 protein_coding processed_transcript MGP_BALBcJ_T0060955.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57438273 57551669 + MGP_BALBcJ_P0060955 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060956.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57438938 57551115 + MGP_BALBcJ_P0060956 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060957.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57438938 57551684 + MGP_BALBcJ_P0060957 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060958.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57439536 57540801 + Mbnl1 protein_coding retained_intron MGP_BALBcJ_T0060959.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57439600 57547097 + Mbnl1 protein_coding processed_transcript MGP_BALBcJ_T0060960.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57517401 57535176 + MGP_BALBcJ_P0060960 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060961.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57517471 57548738 + MGP_BALBcJ_P0060961 Mbnl1 protein_coding protein_coding MGP_BALBcJ_T0060962.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57525306 57537547 + Mbnl1 protein_coding retained_intron MGP_BALBcJ_T0060963.1 MGP_BALBcJ_G0027227.1 mouse_genomes_project 3 57545193 57548454 + Mbnl1 protein_coding retained_intron MGP_BALBcJ_T0014112.1 MGP_BALBcJ_G0012209.1 mouse_genomes_project 3 75259074 75260638 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060455.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32961938 32989522 + MGP_BALBcJ_P0060455 Acad9 protein_coding protein_coding MGP_BALBcJ_T0060456.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32962026 32971059 + MGP_BALBcJ_P0060456 Acad9 protein_coding protein_coding MGP_BALBcJ_T0060457.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32962031 32986593 + Acad9 protein_coding retained_intron MGP_BALBcJ_T0060458.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32971807 32975745 + Acad9 protein_coding retained_intron MGP_BALBcJ_T0060459.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32973490 32984436 + MGP_BALBcJ_P0060459 Acad9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060460.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32975184 32984088 + Acad9 protein_coding retained_intron MGP_BALBcJ_T0060461.1 MGP_BALBcJ_G0027127.1 mouse_genomes_project 3 32975259 32986593 + Acad9 protein_coding retained_intron MGP_BALBcJ_T0004329.1 MGP_BALBcJ_G0003782.1 mouse_genomes_project 3 106007908 106015985 - 1700010K24Rik antisense antisense MGP_BALBcJ_T0014076.1 MGP_BALBcJ_G0012173.1 mouse_genomes_project 3 64810440 64811778 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060547.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34314643 34478589 + MGP_BALBcJ_P0060547 Spata5 protein_coding protein_coding MGP_BALBcJ_T0060548.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34315045 34478589 + MGP_BALBcJ_P0060548 Spata5 protein_coding protein_coding MGP_BALBcJ_T0060549.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34315059 34478589 + MGP_BALBcJ_P0060549 Spata5 protein_coding protein_coding MGP_BALBcJ_T0060550.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34315120 34320138 + Spata5 protein_coding processed_transcript MGP_BALBcJ_T0060551.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34315611 34320901 + Spata5 protein_coding processed_transcript MGP_BALBcJ_T0060552.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34326805 34333900 + Spata5 protein_coding processed_transcript MGP_BALBcJ_T0060553.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34331314 34334020 + Spata5 protein_coding retained_intron MGP_BALBcJ_T0060554.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34346406 34427760 + Spata5 protein_coding retained_intron MGP_BALBcJ_T0060555.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34392482 34478502 + Spata5 protein_coding processed_transcript MGP_BALBcJ_T0060556.1 MGP_BALBcJ_G0027144.1 mouse_genomes_project 3 34473126 34478583 + Spata5 protein_coding processed_transcript MGP_BALBcJ_T0004252.1 MGP_BALBcJ_G0003738.1 mouse_genomes_project 3 82512004 82524963 + 1700036G14Rik antisense antisense MGP_BALBcJ_T0062678.1 MGP_BALBcJ_G0027635.1 mouse_genomes_project 3 96918843 96991910 + MGP_BALBcJ_P0062678 Tbx15 protein_coding protein_coding MGP_BALBcJ_T0062679.1 MGP_BALBcJ_G0027635.1 mouse_genomes_project 3 96932094 97038406 + MGP_BALBcJ_P0062679 Tbx15 protein_coding protein_coding MGP_BALBcJ_T0062680.1 MGP_BALBcJ_G0027635.1 mouse_genomes_project 3 96975324 96995025 + MGP_BALBcJ_P0062680 Tbx15 protein_coding protein_coding MGP_BALBcJ_T0004360.1 MGP_BALBcJ_G0003808.1 mouse_genomes_project 3 131387484 131423906 + Gm42567 antisense antisense MGP_BALBcJ_T0013954.1 MGP_BALBcJ_G0012051.1 mouse_genomes_project 3 30029309 30029541 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010488.1 MGP_BALBcJ_G0008613.1 mouse_genomes_project 3 30087742 30087847 - Gm27974 miRNA miRNA MGP_BALBcJ_T0099751.1 MGP_BALBcJ_G0037787.1 mouse_genomes_project 3 83110753 83110860 - Gm26204 snRNA snRNA MGP_BALBcJ_T0060002.1 MGP_BALBcJ_G0027035.1 mouse_genomes_project 3 7016293 7019895 - MGP_BALBcJ_P0060002 protein_coding protein_coding MGP_BALBcJ_T0060003.1 MGP_BALBcJ_G0027035.1 mouse_genomes_project 3 7016295 7019956 - MGP_BALBcJ_P0060003 protein_coding protein_coding MGP_BALBcJ_T0060004.1 MGP_BALBcJ_G0027035.1 mouse_genomes_project 3 7016298 7019895 - MGP_BALBcJ_P0060004 protein_coding protein_coding MGP_BALBcJ_T0001382.1 MGP_BALBcJ_G0001304.1 mouse_genomes_project 3 151487339 151488250 - TEC TEC MGP_BALBcJ_T0098923.1 MGP_BALBcJ_G0036970.1 mouse_genomes_project 3 102363794 102365179 + Gm43585 sense_intronic sense_intronic MGP_BALBcJ_T0004260.1 MGP_BALBcJ_G0003744.1 mouse_genomes_project 3 86389592 86391131 - Gm16069 antisense antisense MGP_BALBcJ_T0014125.1 MGP_BALBcJ_G0012222.1 mouse_genomes_project 3 80865402 80866175 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061588.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85739450 85743910 - Lmna protein_coding retained_intron MGP_BALBcJ_T0061589.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85740451 85763469 - MGP_BALBcJ_P0061589 Lmna protein_coding protein_coding MGP_BALBcJ_T0061590.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85741149 85763471 - Lmna protein_coding processed_transcript MGP_BALBcJ_T0061591.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85741379 85742167 - Lmna protein_coding retained_intron MGP_BALBcJ_T0061592.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85742507 85763441 - MGP_BALBcJ_P0061592 Lmna protein_coding protein_coding MGP_BALBcJ_T0061593.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85742508 85752592 - MGP_BALBcJ_P0061593 Lmna protein_coding protein_coding MGP_BALBcJ_T0061594.1 MGP_BALBcJ_G0027371.1 mouse_genomes_project 3 85762886 85770175 - MGP_BALBcJ_P0061594 Lmna protein_coding protein_coding MGP_BALBcJ_T0007630.1 MGP_BALBcJ_G0006239.1 mouse_genomes_project 3 104817731 104825621 + A930002I21Rik lincRNA lincRNA MGP_BALBcJ_T0007631.1 MGP_BALBcJ_G0006239.1 mouse_genomes_project 3 104817733 104824440 + A930002I21Rik lincRNA lincRNA MGP_BALBcJ_T0001284.1 MGP_BALBcJ_G0001207.1 mouse_genomes_project 3 108009660 108010427 - TEC TEC MGP_BALBcJ_T0014016.1 MGP_BALBcJ_G0012113.1 mouse_genomes_project 3 48240122 48240507 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007465.1 MGP_BALBcJ_G0006114.1 mouse_genomes_project 3 30509586 30570206 - lincRNA lincRNA MGP_BALBcJ_T0060000.1 MGP_BALBcJ_G0027033.1 mouse_genomes_project 3 7002203 7006282 - MGP_BALBcJ_P0060000 Pmp2 protein_coding protein_coding MGP_BALBcJ_T0014176.1 MGP_BALBcJ_G0012273.1 mouse_genomes_project 3 93506655 93507015 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061113.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66067612 66098512 + MGP_BALBcJ_P0061113 Smc4 protein_coding protein_coding MGP_BALBcJ_T0061114.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66067844 66081643 + MGP_BALBcJ_P0061114 Smc4 protein_coding protein_coding MGP_BALBcJ_T0061115.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66067865 66098507 + MGP_BALBcJ_P0061115 Smc4 protein_coding protein_coding MGP_BALBcJ_T0061116.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66067882 66098512 + MGP_BALBcJ_P0061116 Smc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061117.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66067889 66091914 + MGP_BALBcJ_P0061117 Smc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061118.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66080024 66081708 + Smc4 protein_coding retained_intron MGP_BALBcJ_T0061119.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66080230 66082822 + Smc4 protein_coding processed_transcript MGP_BALBcJ_T0061120.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66082435 66084898 + Smc4 protein_coding retained_intron MGP_BALBcJ_T0061121.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66085545 66087776 + Smc4 protein_coding retained_intron MGP_BALBcJ_T0061122.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66087668 66091357 + MGP_BALBcJ_P0061122 Smc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061123.1 MGP_BALBcJ_G0027264.1 mouse_genomes_project 3 66094241 66096965 + Smc4 protein_coding retained_intron MGP_BALBcJ_T0063319.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114138496 114293382 - MGP_BALBcJ_P0063319 Cdc14a protein_coding protein_coding MGP_BALBcJ_T0063320.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114138496 114293336 - MGP_BALBcJ_P0063320 Cdc14a protein_coding protein_coding MGP_BALBcJ_T0063321.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114188901 114291999 - MGP_BALBcJ_P0063321 Cdc14a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063322.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114193059 114293382 - Cdc14a protein_coding retained_intron MGP_BALBcJ_T0063323.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114269603 114292374 - Cdc14a protein_coding retained_intron MGP_BALBcJ_T0063324.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114272805 114274907 - Cdc14a protein_coding retained_intron MGP_BALBcJ_T0063325.1 MGP_BALBcJ_G0027779.1 mouse_genomes_project 3 114273526 114293245 - Cdc14a protein_coding processed_transcript MGP_BALBcJ_T0062967.1 MGP_BALBcJ_G0027695.1 mouse_genomes_project 3 103661275 103669580 - MGP_BALBcJ_P0062967 I830077J02Rik protein_coding protein_coding MGP_BALBcJ_T0062968.1 MGP_BALBcJ_G0027695.1 mouse_genomes_project 3 103663328 103664928 - MGP_BALBcJ_P0062968 I830077J02Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062969.1 MGP_BALBcJ_G0027695.1 mouse_genomes_project 3 103664614 103669532 - I830077J02Rik protein_coding retained_intron MGP_BALBcJ_T0098932.1 MGP_BALBcJ_G0036979.1 mouse_genomes_project 3 103747164 103748687 - Gm42721 sense_intronic sense_intronic MGP_BALBcJ_T0001365.1 MGP_BALBcJ_G0001287.1 mouse_genomes_project 3 139523347 139525959 + TEC TEC MGP_BALBcJ_T0013993.1 MGP_BALBcJ_G0012090.1 mouse_genomes_project 3 40583491 40584020 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062634.1 MGP_BALBcJ_G0027618.1 mouse_genomes_project 3 95507381 95529463 + MGP_BALBcJ_P0062634 Sec22b protein_coding protein_coding MGP_BALBcJ_T0062635.1 MGP_BALBcJ_G0027618.1 mouse_genomes_project 3 95507407 95528039 + MGP_BALBcJ_P0062635 Sec22b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062636.1 MGP_BALBcJ_G0027618.1 mouse_genomes_project 3 95507416 95513856 + MGP_BALBcJ_P0062636 Sec22b protein_coding protein_coding MGP_BALBcJ_T0062637.1 MGP_BALBcJ_G0027618.1 mouse_genomes_project 3 95507418 95521403 + MGP_BALBcJ_P0062637 Sec22b protein_coding protein_coding MGP_BALBcJ_T0062638.1 MGP_BALBcJ_G0027618.1 mouse_genomes_project 3 95513145 95513856 + Sec22b protein_coding processed_transcript MGP_BALBcJ_T0062069.1 MGP_BALBcJ_G0027456.1 mouse_genomes_project 3 88342063 88344712 - MGP_BALBcJ_P0062069 9130204L05Rik protein_coding protein_coding MGP_BALBcJ_T0013990.1 MGP_BALBcJ_G0012087.1 mouse_genomes_project 3 39400783 39401270 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102471.1 MGP_BALBcJ_G0040287.1 mouse_genomes_project 3 80991461 81013305 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007641.1 MGP_BALBcJ_G0006248.1 mouse_genomes_project 3 114015308 114031963 + Gm26544 lincRNA lincRNA MGP_BALBcJ_T0060176.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23908034 23965276 - MGP_BALBcJ_P0060176 Ect2 protein_coding protein_coding MGP_BALBcJ_T0060177.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23908034 23965293 - MGP_BALBcJ_P0060177 Ect2 protein_coding protein_coding MGP_BALBcJ_T0060178.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23908035 23965269 - MGP_BALBcJ_P0060178 Ect2 protein_coding protein_coding MGP_BALBcJ_T0060179.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23908038 23965265 - MGP_BALBcJ_P0060179 Ect2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060180.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23909118 23927592 - MGP_BALBcJ_P0060180 Ect2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060181.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23927636 23933041 - Ect2 protein_coding retained_intron MGP_BALBcJ_T0060182.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23932226 23965227 - Ect2 protein_coding retained_intron MGP_BALBcJ_T0060183.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23941801 23948806 - Ect2 protein_coding retained_intron MGP_BALBcJ_T0060184.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23956364 23958616 - Ect2 protein_coding retained_intron MGP_BALBcJ_T0060185.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23956434 23965269 - MGP_BALBcJ_P0060185 Ect2 protein_coding protein_coding MGP_BALBcJ_T0060186.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23957382 23965243 - MGP_BALBcJ_P0060186 Ect2 protein_coding protein_coding MGP_BALBcJ_T0060187.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23957398 23965225 - MGP_BALBcJ_P0060187 Ect2 protein_coding protein_coding MGP_BALBcJ_T0060188.1 MGP_BALBcJ_G0027080.1 mouse_genomes_project 3 23957442 23965197 - MGP_BALBcJ_P0060188 Ect2 protein_coding protein_coding MGP_BALBcJ_T0101043.1 MGP_BALBcJ_G0039079.1 mouse_genomes_project 3 72847407 72847542 + Gm25846 snoRNA snoRNA MGP_BALBcJ_T0014271.1 MGP_BALBcJ_G0012368.1 mouse_genomes_project 3 120536181 120536689 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007534.1 MGP_BALBcJ_G0006165.1 mouse_genomes_project 3 55564949 55655456 + 4930593A02Rik lincRNA lincRNA MGP_BALBcJ_T0007535.1 MGP_BALBcJ_G0006165.1 mouse_genomes_project 3 55605825 55664274 + 4930593A02Rik lincRNA lincRNA MGP_BALBcJ_T0060817.1 MGP_BALBcJ_G0027194.1 mouse_genomes_project 3 52050333 52085974 + MGP_BALBcJ_P0060817 Ccdc169 protein_coding protein_coding MGP_BALBcJ_T0060818.1 MGP_BALBcJ_G0027194.1 mouse_genomes_project 3 52053029 52084552 + MGP_BALBcJ_P0060818 Ccdc169 protein_coding protein_coding MGP_BALBcJ_T0060819.1 MGP_BALBcJ_G0027194.1 mouse_genomes_project 3 52053029 52083500 + MGP_BALBcJ_P0060819 Ccdc169 protein_coding protein_coding MGP_BALBcJ_T0060820.1 MGP_BALBcJ_G0027194.1 mouse_genomes_project 3 52053046 52070078 + MGP_BALBcJ_P0060820 Ccdc169 protein_coding protein_coding MGP_BALBcJ_T0060821.1 MGP_BALBcJ_G0027194.1 mouse_genomes_project 3 52055279 52084606 + MGP_BALBcJ_P0060821 Ccdc169 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060822.1 MGP_BALBcJ_G0027194.1 mouse_genomes_project 3 52055279 52084606 + MGP_BALBcJ_P0060822 Ccdc169 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060722.1 MGP_BALBcJ_G0027174.1 mouse_genomes_project 3 49153506 49241419 + MGP_BALBcJ_P0060722 Foxo1 protein_coding protein_coding MGP_BALBcJ_T0061808.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86551103 86562544 - MGP_BALBcJ_P0061808 Adam15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061809.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552201 86562551 - MGP_BALBcJ_P0061809 Adam15 protein_coding protein_coding MGP_BALBcJ_T0061810.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552201 86562558 - MGP_BALBcJ_P0061810 Adam15 protein_coding protein_coding MGP_BALBcJ_T0061811.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552202 86553719 - Adam15 protein_coding processed_transcript MGP_BALBcJ_T0061812.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552205 86553002 - Adam15 protein_coding processed_transcript MGP_BALBcJ_T0061813.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552205 86562521 - MGP_BALBcJ_P0061813 Adam15 protein_coding protein_coding MGP_BALBcJ_T0061814.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552209 86562537 - MGP_BALBcJ_P0061814 Adam15 protein_coding protein_coding MGP_BALBcJ_T0061815.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552306 86552914 - Adam15 protein_coding retained_intron MGP_BALBcJ_T0061816.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552476 86553481 - Adam15 protein_coding retained_intron MGP_BALBcJ_T0061817.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86552635 86556241 - Adam15 protein_coding retained_intron MGP_BALBcJ_T0061818.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86555293 86562536 - Adam15 protein_coding retained_intron MGP_BALBcJ_T0061819.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86559089 86562522 - Adam15 protein_coding retained_intron MGP_BALBcJ_T0061820.1 MGP_BALBcJ_G0027405.1 mouse_genomes_project 3 86561079 86561669 - Adam15 protein_coding processed_transcript MGP_BALBcJ_T0001334.1 MGP_BALBcJ_G0001257.1 mouse_genomes_project 3 125735422 125738831 - TEC TEC MGP_BALBcJ_T0001103.1 MGP_BALBcJ_G0001028.1 mouse_genomes_project 3 5555009 5557975 - TEC TEC MGP_BALBcJ_T0004198.1 MGP_BALBcJ_G0003698.1 mouse_genomes_project 3 29345951 29346493 - Gm37592 antisense antisense MGP_BALBcJ_T0060838.1 MGP_BALBcJ_G0027197.1 mouse_genomes_project 3 52371303 52381522 - MGP_BALBcJ_P0060838 Gm21954 protein_coding protein_coding MGP_BALBcJ_T0098914.1 MGP_BALBcJ_G0036961.1 mouse_genomes_project 3 101869840 101871765 - Gm43258 sense_intronic sense_intronic MGP_BALBcJ_T0014197.1 MGP_BALBcJ_G0012294.1 mouse_genomes_project 3 98911394 98911830 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062775.1 MGP_BALBcJ_G0027659.1 mouse_genomes_project 3 100695383 100708133 + MGP_BALBcJ_P0062775 Sike1 protein_coding protein_coding MGP_BALBcJ_T0062776.1 MGP_BALBcJ_G0027659.1 mouse_genomes_project 3 100695405 100698928 + Sike1 protein_coding retained_intron MGP_BALBcJ_T0062777.1 MGP_BALBcJ_G0027659.1 mouse_genomes_project 3 100695470 100701870 + MGP_BALBcJ_P0062777 Sike1 protein_coding protein_coding MGP_BALBcJ_T0062778.1 MGP_BALBcJ_G0027659.1 mouse_genomes_project 3 100695724 100697028 + Sike1 protein_coding retained_intron MGP_BALBcJ_T0062779.1 MGP_BALBcJ_G0027659.1 mouse_genomes_project 3 100695851 100701512 + MGP_BALBcJ_P0062779 Sike1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062780.1 MGP_BALBcJ_G0027659.1 mouse_genomes_project 3 100696405 100698915 + Sike1 protein_coding retained_intron MGP_BALBcJ_T0011509.1 MGP_BALBcJ_G0009634.1 mouse_genomes_project 3 10675849 10676144 + Gm25981 misc_RNA misc_RNA MGP_BALBcJ_T0014326.1 MGP_BALBcJ_G0012423.1 mouse_genomes_project 3 136686769 136687284 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063444.1 MGP_BALBcJ_G0027801.1 mouse_genomes_project 3 119350244 119351628 - Slc44a3 protein_coding processed_transcript MGP_BALBcJ_T0063445.1 MGP_BALBcJ_G0027801.1 mouse_genomes_project 3 119350244 119422674 - MGP_BALBcJ_P0063445 Slc44a3 protein_coding protein_coding MGP_BALBcJ_T0063446.1 MGP_BALBcJ_G0027801.1 mouse_genomes_project 3 119410822 119417375 - Slc44a3 protein_coding processed_transcript MGP_BALBcJ_T0061185.1 MGP_BALBcJ_G0027282.1 mouse_genomes_project 3 73207727 73863943 + MGP_BALBcJ_P0061185 Fstl5 protein_coding protein_coding MGP_BALBcJ_T0061186.1 MGP_BALBcJ_G0027282.1 mouse_genomes_project 3 73208016 73702992 + Fstl5 protein_coding processed_transcript MGP_BALBcJ_T0061187.1 MGP_BALBcJ_G0027282.1 mouse_genomes_project 3 73209040 73862562 + MGP_BALBcJ_P0061187 Fstl5 protein_coding protein_coding MGP_BALBcJ_T0061188.1 MGP_BALBcJ_G0027282.1 mouse_genomes_project 3 73743339 73746662 + Fstl5 protein_coding retained_intron MGP_BALBcJ_T0061189.1 MGP_BALBcJ_G0027282.1 mouse_genomes_project 3 73750415 73861477 + MGP_BALBcJ_P0061189 Fstl5 protein_coding protein_coding MGP_BALBcJ_T0001239.1 MGP_BALBcJ_G0001162.1 mouse_genomes_project 3 72831670 72832183 - TEC TEC MGP_BALBcJ_T0014342.1 MGP_BALBcJ_G0012439.1 mouse_genomes_project 3 142627795 142628362 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060738.1 MGP_BALBcJ_G0027178.1 mouse_genomes_project 3 50353612 50372008 + MGP_BALBcJ_P0060738 Proser1 protein_coding protein_coding MGP_BALBcJ_T0060739.1 MGP_BALBcJ_G0027178.1 mouse_genomes_project 3 50353753 50354693 + Proser1 protein_coding retained_intron MGP_BALBcJ_T0060740.1 MGP_BALBcJ_G0027178.1 mouse_genomes_project 3 50353878 50364153 + Proser1 protein_coding retained_intron MGP_BALBcJ_T0060741.1 MGP_BALBcJ_G0027178.1 mouse_genomes_project 3 50368383 50370173 + Proser1 protein_coding retained_intron MGP_BALBcJ_T0061355.1 MGP_BALBcJ_G0027322.1 mouse_genomes_project 3 82855441 82869367 - Fam160a1 protein_coding retained_intron MGP_BALBcJ_T0061356.1 MGP_BALBcJ_G0027322.1 mouse_genomes_project 3 82855443 83016394 - MGP_BALBcJ_P0061356 Fam160a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061357.1 MGP_BALBcJ_G0027322.1 mouse_genomes_project 3 82855443 82942050 - MGP_BALBcJ_P0061357 Fam160a1 protein_coding protein_coding MGP_BALBcJ_T0061358.1 MGP_BALBcJ_G0027322.1 mouse_genomes_project 3 82855445 82937174 - MGP_BALBcJ_P0061358 Fam160a1 protein_coding protein_coding MGP_BALBcJ_T0061148.1 MGP_BALBcJ_G0027273.1 mouse_genomes_project 3 70002953 70082050 - MGP_BALBcJ_P0061148 Sis protein_coding protein_coding MGP_BALBcJ_T0061149.1 MGP_BALBcJ_G0027273.1 mouse_genomes_project 3 70002956 70081131 - MGP_BALBcJ_P0061149 Sis protein_coding protein_coding MGP_BALBcJ_T0061150.1 MGP_BALBcJ_G0027273.1 mouse_genomes_project 3 70062810 70063944 - Sis protein_coding retained_intron MGP_BALBcJ_T0061151.1 MGP_BALBcJ_G0027273.1 mouse_genomes_project 3 70079279 70082047 - Sis protein_coding retained_intron MGP_BALBcJ_T0099767.1 MGP_BALBcJ_G0037803.1 mouse_genomes_project 3 90295638 90295740 - Gm24481 snRNA snRNA MGP_BALBcJ_T0062102.1 MGP_BALBcJ_G0027484.1 mouse_genomes_project 3 90018461 90020132 + MGP_BALBcJ_P0062102 Lce1c protein_coding protein_coding MGP_BALBcJ_T0063718.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127899483 127978935 - MGP_BALBcJ_P0063718 Sec24b protein_coding protein_coding MGP_BALBcJ_T0063719.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127900167 127901245 - Sec24b protein_coding retained_intron MGP_BALBcJ_T0063720.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127900336 127901007 - Sec24b protein_coding processed_transcript MGP_BALBcJ_T0063721.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127905302 127907043 - Sec24b protein_coding retained_intron MGP_BALBcJ_T0063722.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127906957 127957016 - MGP_BALBcJ_P0063722 Sec24b protein_coding protein_coding MGP_BALBcJ_T0063723.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127923918 127956986 - Sec24b protein_coding retained_intron MGP_BALBcJ_T0063724.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127923944 127957292 - MGP_BALBcJ_P0063724 Sec24b protein_coding protein_coding MGP_BALBcJ_T0063725.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127926318 127947399 - Sec24b protein_coding retained_intron MGP_BALBcJ_T0063726.1 MGP_BALBcJ_G0027850.1 mouse_genomes_project 3 127957408 127979581 - Sec24b protein_coding processed_transcript MGP_BALBcJ_T0062843.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101452228 101505026 - MGP_BALBcJ_P0062843 Hipk1 protein_coding protein_coding MGP_BALBcJ_T0062844.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101455975 101504520 - MGP_BALBcJ_P0062844 Hipk1 protein_coding protein_coding MGP_BALBcJ_T0062845.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101456073 101504719 - MGP_BALBcJ_P0062845 Hipk1 protein_coding protein_coding MGP_BALBcJ_T0062846.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101457569 101505024 - MGP_BALBcJ_P0062846 Hipk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062847.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101460514 101463446 - Hipk1 protein_coding retained_intron MGP_BALBcJ_T0062848.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101461763 101463395 - Hipk1 protein_coding retained_intron MGP_BALBcJ_T0062849.1 MGP_BALBcJ_G0027669.1 mouse_genomes_project 3 101466537 101504738 - Hipk1 protein_coding retained_intron MGP_BALBcJ_T0014276.1 MGP_BALBcJ_G0012373.1 mouse_genomes_project 3 121415260 121416006 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098933.1 MGP_BALBcJ_G0036980.1 mouse_genomes_project 3 117649133 117652373 - Gm42664 sense_intronic sense_intronic MGP_BALBcJ_T0014046.1 MGP_BALBcJ_G0012143.1 mouse_genomes_project 3 56599912 56600504 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007677.1 MGP_BALBcJ_G0006275.1 mouse_genomes_project 3 128792541 128795293 + Gm43351 lincRNA lincRNA MGP_BALBcJ_T0061399.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84592084 84607408 + MGP_BALBcJ_P0061399 Fcrl1 protein_coding protein_coding MGP_BALBcJ_T0061400.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84592086 84607801 + MGP_BALBcJ_P0061400 Fcrl1 protein_coding protein_coding MGP_BALBcJ_T0061401.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84592145 84607802 + MGP_BALBcJ_P0061401 Fcrl1 protein_coding protein_coding MGP_BALBcJ_T0061402.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84592157 84618320 + MGP_BALBcJ_P0061402 Fcrl1 protein_coding protein_coding MGP_BALBcJ_T0061403.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84592164 84607422 + MGP_BALBcJ_P0061403 Fcrl1 protein_coding protein_coding MGP_BALBcJ_T0061404.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84592192 84606959 + MGP_BALBcJ_P0061404 Fcrl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0061405.1 MGP_BALBcJ_G0027335.1 mouse_genomes_project 3 84601302 84607766 + Fcrl1 protein_coding retained_intron MGP_BALBcJ_T0010529.1 MGP_BALBcJ_G0008654.1 mouse_genomes_project 3 116326797 116326870 + Mir137 miRNA miRNA MGP_BALBcJ_T0001156.1 MGP_BALBcJ_G0001081.1 mouse_genomes_project 3 37730732 37731695 - TEC TEC MGP_BALBcJ_T0014019.1 MGP_BALBcJ_G0012116.1 mouse_genomes_project 3 48512055 48512491 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013950.1 MGP_BALBcJ_G0012047.1 mouse_genomes_project 3 27388648 27389121 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063677.1 MGP_BALBcJ_G0027841.1 mouse_genomes_project 3 127444020 127549604 + MGP_BALBcJ_P0063677 Elovl6 protein_coding protein_coding MGP_BALBcJ_T0063678.1 MGP_BALBcJ_G0027841.1 mouse_genomes_project 3 127463721 127539449 + MGP_BALBcJ_P0063678 Elovl6 protein_coding protein_coding MGP_BALBcJ_T0098895.1 MGP_BALBcJ_G0036942.1 mouse_genomes_project 3 99088162 99090351 + Gm42939 sense_intronic sense_intronic MGP_BALBcJ_T0004302.1 MGP_BALBcJ_G0003772.1 mouse_genomes_project 3 100476305 100477916 - Gm42681 antisense antisense MGP_BALBcJ_T0014266.1 MGP_BALBcJ_G0012363.1 mouse_genomes_project 3 119269167 119269588 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059967.1 MGP_BALBcJ_G0027022.1 mouse_genomes_project 3 4171371 4248348 + MGP_BALBcJ_P0059967 Pkia protein_coding protein_coding MGP_BALBcJ_T0059968.1 MGP_BALBcJ_G0027022.1 mouse_genomes_project 3 4171372 4256461 + MGP_BALBcJ_P0059968 Pkia protein_coding protein_coding MGP_BALBcJ_T0059969.1 MGP_BALBcJ_G0027022.1 mouse_genomes_project 3 4235874 4253507 + MGP_BALBcJ_P0059969 Pkia protein_coding protein_coding MGP_BALBcJ_T0001338.1 MGP_BALBcJ_G0001260.1 mouse_genomes_project 3 127126963 127129594 - TEC TEC MGP_BALBcJ_T0013901.1 MGP_BALBcJ_G0011998.1 mouse_genomes_project 3 9714102 9715066 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062397.1 MGP_BALBcJ_G0027562.1 mouse_genomes_project 3 93205716 93217737 - MGP_BALBcJ_P0062397 Adamtsl4 protein_coding protein_coding MGP_BALBcJ_T0062398.1 MGP_BALBcJ_G0027562.1 mouse_genomes_project 3 93205719 93217678 - MGP_BALBcJ_P0062398 Adamtsl4 protein_coding protein_coding MGP_BALBcJ_T0062399.1 MGP_BALBcJ_G0027562.1 mouse_genomes_project 3 93206265 93206667 - Adamtsl4 protein_coding processed_transcript MGP_BALBcJ_T0062400.1 MGP_BALBcJ_G0027562.1 mouse_genomes_project 3 93208540 93209612 - Adamtsl4 protein_coding processed_transcript MGP_BALBcJ_T0062401.1 MGP_BALBcJ_G0027562.1 mouse_genomes_project 3 93214079 93217685 - MGP_BALBcJ_P0062401 Adamtsl4 protein_coding protein_coding MGP_BALBcJ_T0061835.1 MGP_BALBcJ_G0027409.1 mouse_genomes_project 3 86615194 86617000 - MGP_BALBcJ_P0061835 Lenep protein_coding protein_coding MGP_BALBcJ_T0062696.1 MGP_BALBcJ_G0027639.1 mouse_genomes_project 3 98120021 98161582 - Fam46c protein_coding processed_transcript MGP_BALBcJ_T0062697.1 MGP_BALBcJ_G0027639.1 mouse_genomes_project 3 98120024 98161578 - Fam46c protein_coding processed_transcript MGP_BALBcJ_T0062698.1 MGP_BALBcJ_G0027639.1 mouse_genomes_project 3 98138768 98161708 - MGP_BALBcJ_P0062698 Fam46c protein_coding protein_coding MGP_BALBcJ_T0011510.1 MGP_BALBcJ_G0009635.1 mouse_genomes_project 3 10862139 10862420 - Gm22026 misc_RNA misc_RNA MGP_BALBcJ_T0101045.1 MGP_BALBcJ_G0039081.1 mouse_genomes_project 3 76109548 76109680 + Gm23440 snoRNA snoRNA MGP_BALBcJ_T0063760.1 MGP_BALBcJ_G0027857.1 mouse_genomes_project 3 129158951 129197618 - MGP_BALBcJ_P0063760 Hadh protein_coding protein_coding MGP_BALBcJ_T0063761.1 MGP_BALBcJ_G0027857.1 mouse_genomes_project 3 129170633 129197541 - Hadh protein_coding retained_intron MGP_BALBcJ_T0001231.1 MGP_BALBcJ_G0001154.1 mouse_genomes_project 3 63150284 63151553 + TEC TEC MGP_BALBcJ_T0098934.1 MGP_BALBcJ_G0036981.1 mouse_genomes_project 3 127113183 127114661 + Gm27195 sense_intronic sense_intronic MGP_BALBcJ_T0102453.1 MGP_BALBcJ_G0040269.1 mouse_genomes_project 3 11632750 11636698 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007693.1 MGP_BALBcJ_G0006290.1 mouse_genomes_project 3 134845413 134847716 - Gm43356 lincRNA lincRNA MGP_BALBcJ_T0004379.1 MGP_BALBcJ_G0003820.1 mouse_genomes_project 3 142702285 142724837 + antisense antisense MGP_BALBcJ_T0062653.1 MGP_BALBcJ_G0027625.1 mouse_genomes_project 3 96175971 96187494 - MGP_BALBcJ_P0062653 protein_coding protein_coding MGP_BALBcJ_T0062657.1 MGP_BALBcJ_G0027625.1 mouse_genomes_project 3 96176904 96187411 - MGP_BALBcJ_P0062657 protein_coding protein_coding MGP_BALBcJ_T0007692.1 MGP_BALBcJ_G0006289.1 mouse_genomes_project 3 134835938 134839270 - Gm43357 lincRNA lincRNA MGP_BALBcJ_T0062450.1 MGP_BALBcJ_G0027568.1 mouse_genomes_project 3 93412712 93416412 - MGP_BALBcJ_P0062450 Ciart protein_coding protein_coding MGP_BALBcJ_T0062451.1 MGP_BALBcJ_G0027568.1 mouse_genomes_project 3 93412714 93416438 - MGP_BALBcJ_P0062451 Ciart protein_coding protein_coding MGP_BALBcJ_T0062452.1 MGP_BALBcJ_G0027568.1 mouse_genomes_project 3 93413014 93416458 - MGP_BALBcJ_P0062452 Ciart protein_coding protein_coding MGP_BALBcJ_T0062453.1 MGP_BALBcJ_G0027568.1 mouse_genomes_project 3 93413720 93415449 - MGP_BALBcJ_P0062453 Ciart protein_coding protein_coding MGP_BALBcJ_T0062454.1 MGP_BALBcJ_G0027568.1 mouse_genomes_project 3 93414654 93416410 - MGP_BALBcJ_P0062454 Ciart protein_coding protein_coding MGP_BALBcJ_T0062455.1 MGP_BALBcJ_G0027568.1 mouse_genomes_project 3 93414875 93416281 - MGP_BALBcJ_P0062455 Ciart protein_coding protein_coding MGP_BALBcJ_T0062461.1 MGP_BALBcJ_G0027570.1 mouse_genomes_project 3 93428604 93432923 + MGP_BALBcJ_P0062461 Aph1a protein_coding protein_coding MGP_BALBcJ_T0062462.1 MGP_BALBcJ_G0027570.1 mouse_genomes_project 3 93428668 93429627 + MGP_BALBcJ_P0062462 Aph1a protein_coding protein_coding MGP_BALBcJ_T0062463.1 MGP_BALBcJ_G0027570.1 mouse_genomes_project 3 93428690 93432080 + MGP_BALBcJ_P0062463 Aph1a protein_coding protein_coding MGP_BALBcJ_T0062464.1 MGP_BALBcJ_G0027570.1 mouse_genomes_project 3 93429100 93432467 + Aph1a protein_coding retained_intron MGP_BALBcJ_T0001128.1 MGP_BALBcJ_G0001053.1 mouse_genomes_project 3 27785994 27786304 - TEC TEC MGP_BALBcJ_T0014145.1 MGP_BALBcJ_G0012242.1 mouse_genomes_project 3 87905551 87905704 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014243.1 MGP_BALBcJ_G0012340.1 mouse_genomes_project 3 110897029 110897426 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013879.1 MGP_BALBcJ_G0011976.1 mouse_genomes_project 3 3471287 3471546 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014227.1 MGP_BALBcJ_G0012324.1 mouse_genomes_project 3 106213167 106213546 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004182.1 MGP_BALBcJ_G0003688.1 mouse_genomes_project 3 2013400 2057808 - 2700069I18Rik antisense antisense MGP_BALBcJ_T0004183.1 MGP_BALBcJ_G0003688.1 mouse_genomes_project 3 2014794 2057826 - 2700069I18Rik antisense antisense MGP_BALBcJ_T0060444.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32845783 32888791 - MGP_BALBcJ_P0060444 Mccc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060445.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32846304 32888860 - MGP_BALBcJ_P0060445 Mccc1 protein_coding protein_coding MGP_BALBcJ_T0060446.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32846310 32847581 - Mccc1 protein_coding retained_intron MGP_BALBcJ_T0060447.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32848198 32855583 - Mccc1 protein_coding retained_intron MGP_BALBcJ_T0060448.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32859851 32884026 - Mccc1 protein_coding retained_intron MGP_BALBcJ_T0060449.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32861664 32863099 - Mccc1 protein_coding retained_intron MGP_BALBcJ_T0060450.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32862307 32876469 - MGP_BALBcJ_P0060450 Mccc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060451.1 MGP_BALBcJ_G0027125.1 mouse_genomes_project 3 32871522 32888823 - MGP_BALBcJ_P0060451 Mccc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010494.1 MGP_BALBcJ_G0008619.1 mouse_genomes_project 3 37387023 37387091 + Gm23810 miRNA miRNA MGP_BALBcJ_T0014038.1 MGP_BALBcJ_G0012135.1 mouse_genomes_project 3 54818620 54818854 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007680.1 MGP_BALBcJ_G0006278.1 mouse_genomes_project 3 130270578 130272350 - Gm42880 lincRNA lincRNA MGP_BALBcJ_T0010480.1 MGP_BALBcJ_G0008605.1 mouse_genomes_project 3 17101230 17101300 - Mir7007 miRNA miRNA MGP_BALBcJ_T0007592.1 MGP_BALBcJ_G0006205.1 mouse_genomes_project 3 89411729 89414010 + Gm43736 lincRNA lincRNA MGP_BALBcJ_T0061076.1 MGP_BALBcJ_G0027254.1 mouse_genomes_project 3 64525785 64531702 - MGP_BALBcJ_P0061076 Lxn protein_coding protein_coding MGP_BALBcJ_T0061077.1 MGP_BALBcJ_G0027254.1 mouse_genomes_project 3 64525788 64529415 - Lxn protein_coding retained_intron MGP_BALBcJ_T0061078.1 MGP_BALBcJ_G0027254.1 mouse_genomes_project 3 64528846 64531558 - Lxn protein_coding retained_intron MGP_BALBcJ_T0014135.1 MGP_BALBcJ_G0012232.1 mouse_genomes_project 3 84148172 84148468 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061999.1 MGP_BALBcJ_G0027435.1 mouse_genomes_project 3 87630847 87635547 - Slc27a3 protein_coding retained_intron MGP_BALBcJ_T0062000.1 MGP_BALBcJ_G0027435.1 mouse_genomes_project 3 87630847 87635536 - MGP_BALBcJ_P0062000 Slc27a3 protein_coding protein_coding MGP_BALBcJ_T0062001.1 MGP_BALBcJ_G0027435.1 mouse_genomes_project 3 87630849 87635273 - MGP_BALBcJ_P0062001 Slc27a3 protein_coding protein_coding MGP_BALBcJ_T0062002.1 MGP_BALBcJ_G0027435.1 mouse_genomes_project 3 87633043 87634590 - Slc27a3 protein_coding retained_intron MGP_BALBcJ_T0062003.1 MGP_BALBcJ_G0027435.1 mouse_genomes_project 3 87633971 87635239 - Slc27a3 protein_coding processed_transcript MGP_BALBcJ_T0101041.1 MGP_BALBcJ_G0039077.1 mouse_genomes_project 3 67051121 67051252 - Gm23484 snoRNA snoRNA MGP_BALBcJ_T0064156.1 MGP_BALBcJ_G0027939.1 mouse_genomes_project 3 144094093 144143934 + MGP_BALBcJ_P0064156 Mcoln2 protein_coding protein_coding MGP_BALBcJ_T0064157.1 MGP_BALBcJ_G0027939.1 mouse_genomes_project 3 144094239 144117454 + Mcoln2 protein_coding retained_intron MGP_BALBcJ_T0064158.1 MGP_BALBcJ_G0027939.1 mouse_genomes_project 3 144094434 144143933 + MGP_BALBcJ_P0064158 Mcoln2 protein_coding protein_coding MGP_BALBcJ_T0064159.1 MGP_BALBcJ_G0027939.1 mouse_genomes_project 3 144135374 144140907 + MGP_BALBcJ_P0064159 Mcoln2 protein_coding protein_coding MGP_BALBcJ_T0064160.1 MGP_BALBcJ_G0027939.1 mouse_genomes_project 3 144140503 144143561 + Mcoln2 protein_coding retained_intron MGP_BALBcJ_T0062091.1 MGP_BALBcJ_G0027475.1 mouse_genomes_project 3 89838220 89838451 - MGP_BALBcJ_P0062091 Sprr4 protein_coding protein_coding MGP_BALBcJ_T0060896.1 MGP_BALBcJ_G0027211.1 mouse_genomes_project 3 55479392 55505587 - MGP_BALBcJ_P0060896 Erich6 protein_coding protein_coding MGP_BALBcJ_T0060897.1 MGP_BALBcJ_G0027211.1 mouse_genomes_project 3 55479402 55499167 - MGP_BALBcJ_P0060897 Erich6 protein_coding unknown_likely_coding MGP_BALBcJ_T0060858.1 MGP_BALBcJ_G0027202.1 mouse_genomes_project 3 54330059 54450883 - MGP_BALBcJ_P0060858 Wwtr1 protein_coding protein_coding MGP_BALBcJ_T0060859.1 MGP_BALBcJ_G0027202.1 mouse_genomes_project 3 54330192 54450965 - MGP_BALBcJ_P0060859 Wwtr1 protein_coding protein_coding MGP_BALBcJ_T0007621.1 MGP_BALBcJ_G0006232.1 mouse_genomes_project 3 100772910 100774228 + Gm43062 lincRNA lincRNA MGP_BALBcJ_T0062864.1 MGP_BALBcJ_G0027673.1 mouse_genomes_project 3 101546214 101554616 + MGP_BALBcJ_P0062864 Bcl2l15 protein_coding protein_coding MGP_BALBcJ_T0062865.1 MGP_BALBcJ_G0027673.1 mouse_genomes_project 3 101546384 101569931 + MGP_BALBcJ_P0062865 Bcl2l15 protein_coding protein_coding MGP_BALBcJ_T0062866.1 MGP_BALBcJ_G0027673.1 mouse_genomes_project 3 101546445 101560647 + MGP_BALBcJ_P0062866 Bcl2l15 protein_coding unknown_likely_coding MGP_BALBcJ_T0062867.1 MGP_BALBcJ_G0027673.1 mouse_genomes_project 3 101562327 101569151 + Bcl2l15 protein_coding processed_transcript MGP_BALBcJ_T0062868.1 MGP_BALBcJ_G0027673.1 mouse_genomes_project 3 101567315 101569013 + Bcl2l15 protein_coding processed_transcript MGP_BALBcJ_T0063774.1 MGP_BALBcJ_G0027861.1 mouse_genomes_project 3 129915865 130012250 + MGP_BALBcJ_P0063774 Dkk2 protein_coding protein_coding MGP_BALBcJ_T0060705.1 MGP_BALBcJ_G0027170.1 mouse_genomes_project 3 48360045 48374430 + Rab33b protein_coding processed_transcript MGP_BALBcJ_T0060706.1 MGP_BALBcJ_G0027170.1 mouse_genomes_project 3 48360055 48360652 + MGP_BALBcJ_P0060706 Rab33b protein_coding protein_coding MGP_BALBcJ_T0060707.1 MGP_BALBcJ_G0027170.1 mouse_genomes_project 3 48360091 48377784 + MGP_BALBcJ_P0060707 Rab33b protein_coding protein_coding MGP_BALBcJ_T0062592.1 MGP_BALBcJ_G0027609.1 mouse_genomes_project 3 94507554 94519889 - MGP_BALBcJ_P0062592 Gja8 protein_coding protein_coding MGP_BALBcJ_T0064346.1 MGP_BALBcJ_G0027967.1 mouse_genomes_project 3 151207862 151745220 - MGP_BALBcJ_P0064346 St6galnac3 protein_coding protein_coding MGP_BALBcJ_T0064347.1 MGP_BALBcJ_G0027967.1 mouse_genomes_project 3 151214967 151234816 - MGP_BALBcJ_P0064347 St6galnac3 protein_coding protein_coding MGP_BALBcJ_T0064348.1 MGP_BALBcJ_G0027967.1 mouse_genomes_project 3 151216218 151745159 - MGP_BALBcJ_P0064348 St6galnac3 protein_coding protein_coding MGP_BALBcJ_T0064349.1 MGP_BALBcJ_G0027967.1 mouse_genomes_project 3 151523105 151523971 - St6galnac3 protein_coding retained_intron MGP_BALBcJ_T0064350.1 MGP_BALBcJ_G0027967.1 mouse_genomes_project 3 151523360 151741042 - St6galnac3 protein_coding retained_intron MGP_BALBcJ_T0001118.1 MGP_BALBcJ_G0001043.1 mouse_genomes_project 3 25141644 25143382 + TEC TEC MGP_BALBcJ_T0061021.1 MGP_BALBcJ_G0027244.1 mouse_genomes_project 3 62441861 62454880 - MGP_BALBcJ_P0061021 Ssr3 protein_coding protein_coding MGP_BALBcJ_T0061022.1 MGP_BALBcJ_G0027244.1 mouse_genomes_project 3 62443885 62445587 - Ssr3 protein_coding retained_intron MGP_BALBcJ_T0061023.1 MGP_BALBcJ_G0027244.1 mouse_genomes_project 3 62444235 62454810 - MGP_BALBcJ_P0061023 Ssr3 protein_coding protein_coding MGP_BALBcJ_T0063489.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120191861 120329467 + Bcar3 protein_coding retained_intron MGP_BALBcJ_T0063490.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120322078 120329185 + Bcar3 protein_coding retained_intron MGP_BALBcJ_T0063491.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120322099 120433344 + MGP_BALBcJ_P0063491 Bcar3 protein_coding protein_coding MGP_BALBcJ_T0063492.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120322144 120374725 + Bcar3 protein_coding processed_transcript MGP_BALBcJ_T0063493.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120386846 120411561 + MGP_BALBcJ_P0063493 Bcar3 protein_coding protein_coding MGP_BALBcJ_T0063494.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120407787 120411562 + MGP_BALBcJ_P0063494 Bcar3 protein_coding protein_coding MGP_BALBcJ_T0063495.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120411176 120415861 + Bcar3 protein_coding retained_intron MGP_BALBcJ_T0063496.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120414240 120416049 + MGP_BALBcJ_P0063496 Bcar3 protein_coding protein_coding MGP_BALBcJ_T0063497.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120415333 120426363 + MGP_BALBcJ_P0063497 Bcar3 protein_coding protein_coding MGP_BALBcJ_T0063498.1 MGP_BALBcJ_G0027809.1 mouse_genomes_project 3 120427798 120428558 + Bcar3 protein_coding retained_intron MGP_BALBcJ_T0060602.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37769175 37797241 + MGP_BALBcJ_P0060602 Larp1b protein_coding protein_coding MGP_BALBcJ_T0060603.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37769613 37796705 + MGP_BALBcJ_P0060603 Larp1b protein_coding protein_coding MGP_BALBcJ_T0060604.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37769639 37781307 + MGP_BALBcJ_P0060604 Larp1b protein_coding protein_coding MGP_BALBcJ_T0060605.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37780710 37783114 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0060606.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37781247 37796858 + MGP_BALBcJ_P0060606 Larp1b protein_coding protein_coding MGP_BALBcJ_T0060607.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37783059 37831724 + MGP_BALBcJ_P0060607 Larp1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060608.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37790715 37796452 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0060609.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37830434 37859581 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0060610.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37841337 37859637 + Larp1b protein_coding retained_intron MGP_BALBcJ_T0060611.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37843231 37859054 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0060612.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37843909 37858490 + MGP_BALBcJ_P0060612 Larp1b protein_coding protein_coding MGP_BALBcJ_T0060613.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37852913 37853639 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0060614.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37852932 37859601 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0060615.1 MGP_BALBcJ_G0027156.1 mouse_genomes_project 3 37856131 37858012 + Larp1b protein_coding processed_transcript MGP_BALBcJ_T0010518.1 MGP_BALBcJ_G0008643.1 mouse_genomes_project 3 92510947 92511019 + Mir7013 miRNA miRNA MGP_BALBcJ_T0099779.1 MGP_BALBcJ_G0037815.1 mouse_genomes_project 3 102317998 102318080 - Gm26091 snRNA snRNA MGP_BALBcJ_T0014094.1 MGP_BALBcJ_G0012191.1 mouse_genomes_project 3 68742318 68747094 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007738.1 MGP_BALBcJ_G0006328.1 mouse_genomes_project 3 147251133 147414018 - Gm30382 lincRNA lincRNA MGP_BALBcJ_T0007739.1 MGP_BALBcJ_G0006328.1 mouse_genomes_project 3 147251591 147292446 - Gm30382 lincRNA lincRNA MGP_BALBcJ_T0007741.1 MGP_BALBcJ_G0006328.1 mouse_genomes_project 3 147281420 147414051 - Gm30382 lincRNA lincRNA MGP_BALBcJ_T0064238.1 MGP_BALBcJ_G0027953.1 mouse_genomes_project 3 149454080 149567370 + MGP_BALBcJ_P0064238 Adgrl4 protein_coding protein_coding MGP_BALBcJ_T0064239.1 MGP_BALBcJ_G0027953.1 mouse_genomes_project 3 149454122 149520685 + MGP_BALBcJ_P0064239 Adgrl4 protein_coding protein_coding MGP_BALBcJ_T0064240.1 MGP_BALBcJ_G0027953.1 mouse_genomes_project 3 149454467 149518476 + Adgrl4 protein_coding processed_transcript MGP_BALBcJ_T0064241.1 MGP_BALBcJ_G0027953.1 mouse_genomes_project 3 149455289 149520656 + Adgrl4 protein_coding retained_intron MGP_BALBcJ_T0064242.1 MGP_BALBcJ_G0027953.1 mouse_genomes_project 3 149520559 149527951 + Adgrl4 protein_coding processed_transcript MGP_BALBcJ_T0064243.1 MGP_BALBcJ_G0027953.1 mouse_genomes_project 3 149537940 149542649 + Adgrl4 protein_coding processed_transcript MGP_BALBcJ_T0001210.1 MGP_BALBcJ_G0001133.1 mouse_genomes_project 3 52393265 52396658 + TEC TEC MGP_BALBcJ_T0004269.1 MGP_BALBcJ_G0003750.1 mouse_genomes_project 3 87697042 87702627 + Gm16048 antisense antisense MGP_BALBcJ_T0099722.1 MGP_BALBcJ_G0037758.1 mouse_genomes_project 3 15051077 15051241 - Gm23686 snRNA snRNA MGP_BALBcJ_T0013910.1 MGP_BALBcJ_G0012007.1 mouse_genomes_project 3 11360388 11361396 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014157.1 MGP_BALBcJ_G0012254.1 mouse_genomes_project 3 90447927 90448059 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010519.1 MGP_BALBcJ_G0008644.1 mouse_genomes_project 3 92649535 92649662 - Mir8099-1 miRNA miRNA MGP_BALBcJ_T0062122.1 MGP_BALBcJ_G0027502.1 mouse_genomes_project 3 90361170 90362484 - MGP_BALBcJ_P0062122 Lce1m protein_coding protein_coding MGP_BALBcJ_T0062123.1 MGP_BALBcJ_G0027502.1 mouse_genomes_project 3 90361930 90362483 - MGP_BALBcJ_P0062123 Lce1m protein_coding protein_coding MGP_BALBcJ_T0014131.1 MGP_BALBcJ_G0012228.1 mouse_genomes_project 3 83352507 83352940 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060285.1 MGP_BALBcJ_G0027099.1 mouse_genomes_project 3 27618895 27647354 + MGP_BALBcJ_P0060285 Sec62 protein_coding protein_coding MGP_BALBcJ_T0060286.1 MGP_BALBcJ_G0027099.1 mouse_genomes_project 3 27619356 27627562 + Sec62 protein_coding retained_intron MGP_BALBcJ_T0060287.1 MGP_BALBcJ_G0027099.1 mouse_genomes_project 3 27644941 27646123 + Sec62 protein_coding processed_transcript MGP_BALBcJ_T0098915.1 MGP_BALBcJ_G0036962.1 mouse_genomes_project 3 101874366 101875078 - C030032O16Rik sense_intronic sense_intronic MGP_BALBcJ_T0010534.1 MGP_BALBcJ_G0008659.1 mouse_genomes_project 3 125448115 125448183 + Mir302c miRNA miRNA MGP_BALBcJ_T0064351.1 MGP_BALBcJ_G0027968.1 mouse_genomes_project 3 151869664 151880532 + MGP_BALBcJ_P0064351 Asb17 protein_coding protein_coding MGP_BALBcJ_T0064352.1 MGP_BALBcJ_G0027968.1 mouse_genomes_project 3 151869721 151879061 + MGP_BALBcJ_P0064352 Asb17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004193.1 MGP_BALBcJ_G0003695.1 mouse_genomes_project 3 27509648 27516133 + Gm15462 antisense antisense MGP_BALBcJ_T0010493.1 MGP_BALBcJ_G0008618.1 mouse_genomes_project 3 35454408 35454514 - Gm24462 miRNA miRNA MGP_BALBcJ_T0014180.1 MGP_BALBcJ_G0012277.1 mouse_genomes_project 3 94030164 94031809 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014111.1 MGP_BALBcJ_G0012208.1 mouse_genomes_project 3 75181049 75181490 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004234.1 MGP_BALBcJ_G0003725.1 mouse_genomes_project 3 58291787 58295130 - Gm37696 antisense antisense MGP_BALBcJ_T0007510.1 MGP_BALBcJ_G0006147.1 mouse_genomes_project 3 46012051 46031204 + Gm31415 lincRNA lincRNA MGP_BALBcJ_T0004342.1 MGP_BALBcJ_G0003793.1 mouse_genomes_project 3 120328761 120361940 - Gm42836 antisense antisense MGP_BALBcJ_T0062011.1 MGP_BALBcJ_G0027437.1 mouse_genomes_project 3 87696007 87711879 - MGP_BALBcJ_P0062011 Npr1 protein_coding protein_coding MGP_BALBcJ_T0062012.1 MGP_BALBcJ_G0027437.1 mouse_genomes_project 3 87696126 87697241 - Npr1 protein_coding retained_intron MGP_BALBcJ_T0062013.1 MGP_BALBcJ_G0027437.1 mouse_genomes_project 3 87700535 87703008 - Npr1 protein_coding processed_transcript MGP_BALBcJ_T0062014.1 MGP_BALBcJ_G0027437.1 mouse_genomes_project 3 87702930 87704475 - Npr1 protein_coding retained_intron MGP_BALBcJ_T0062015.1 MGP_BALBcJ_G0027437.1 mouse_genomes_project 3 87702949 87706956 - MGP_BALBcJ_P0062015 Npr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014214.1 MGP_BALBcJ_G0012311.1 mouse_genomes_project 3 102643365 102643619 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007671.1 MGP_BALBcJ_G0006271.1 mouse_genomes_project 3 128653316 128654301 + Gm42997 lincRNA lincRNA MGP_BALBcJ_T0007672.1 MGP_BALBcJ_G0006271.1 mouse_genomes_project 3 128653457 128695695 + Gm42997 lincRNA lincRNA MGP_BALBcJ_T0063954.1 MGP_BALBcJ_G0027895.1 mouse_genomes_project 3 136022664 136040661 - MGP_BALBcJ_P0063954 4930579F01Rik protein_coding protein_coding MGP_BALBcJ_T0063955.1 MGP_BALBcJ_G0027895.1 mouse_genomes_project 3 136022721 136040701 - MGP_BALBcJ_P0063955 4930579F01Rik protein_coding protein_coding MGP_BALBcJ_T0063956.1 MGP_BALBcJ_G0027895.1 mouse_genomes_project 3 136037054 136047744 - 4930579F01Rik protein_coding processed_transcript MGP_BALBcJ_T0063273.1 MGP_BALBcJ_G0027769.1 mouse_genomes_project 3 111425428 111447564 - MGP_BALBcJ_P0063273 Amy1 protein_coding protein_coding MGP_BALBcJ_T0063274.1 MGP_BALBcJ_G0027769.1 mouse_genomes_project 3 111425671 111444496 - MGP_BALBcJ_P0063274 Amy1 protein_coding protein_coding MGP_BALBcJ_T0063275.1 MGP_BALBcJ_G0027769.1 mouse_genomes_project 3 111425867 111431742 - Amy1 protein_coding retained_intron MGP_BALBcJ_T0063276.1 MGP_BALBcJ_G0027769.1 mouse_genomes_project 3 111432413 111444006 - MGP_BALBcJ_P0063276 Amy1 protein_coding protein_coding MGP_BALBcJ_T0063277.1 MGP_BALBcJ_G0027769.1 mouse_genomes_project 3 111434710 111479932 - MGP_BALBcJ_P0063277 Amy1 protein_coding protein_coding MGP_BALBcJ_T0060169.1 MGP_BALBcJ_G0027078.1 mouse_genomes_project 3 22232356 23161172 - MGP_BALBcJ_P0060169 Nlgn1 protein_coding protein_coding MGP_BALBcJ_T0060170.1 MGP_BALBcJ_G0027078.1 mouse_genomes_project 3 22237951 22945797 - MGP_BALBcJ_P0060170 Nlgn1 protein_coding protein_coding MGP_BALBcJ_T0060171.1 MGP_BALBcJ_G0027078.1 mouse_genomes_project 3 22237951 22945797 - MGP_BALBcJ_P0060171 Nlgn1 protein_coding protein_coding MGP_BALBcJ_T0060172.1 MGP_BALBcJ_G0027078.1 mouse_genomes_project 3 22239571 22971614 - MGP_BALBcJ_P0060172 Nlgn1 protein_coding protein_coding MGP_BALBcJ_T0060173.1 MGP_BALBcJ_G0027078.1 mouse_genomes_project 3 22943732 23160582 - Nlgn1 protein_coding retained_intron MGP_BALBcJ_T0014077.1 MGP_BALBcJ_G0012174.1 mouse_genomes_project 3 65413474 65414059 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063086.1 MGP_BALBcJ_G0027728.1 mouse_genomes_project 3 105622736 105639035 + MGP_BALBcJ_P0063086 Eps8l3 protein_coding protein_coding MGP_BALBcJ_T0063087.1 MGP_BALBcJ_G0027728.1 mouse_genomes_project 3 105622751 105626761 + Eps8l3 protein_coding processed_transcript MGP_BALBcJ_T0063088.1 MGP_BALBcJ_G0027728.1 mouse_genomes_project 3 105622769 105627137 + MGP_BALBcJ_P0063088 Eps8l3 protein_coding protein_coding MGP_BALBcJ_T0001113.1 MGP_BALBcJ_G0001038.1 mouse_genomes_project 3 17283822 17284068 + TEC TEC MGP_BALBcJ_T0014217.1 MGP_BALBcJ_G0012314.1 mouse_genomes_project 3 103781658 103782126 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001264.1 MGP_BALBcJ_G0001187.1 mouse_genomes_project 3 93806335 93807949 + TEC TEC MGP_BALBcJ_T0007713.1 MGP_BALBcJ_G0006307.1 mouse_genomes_project 3 141266494 141268626 + 1700001N15Rik lincRNA lincRNA MGP_BALBcJ_T0014150.1 MGP_BALBcJ_G0012247.1 mouse_genomes_project 3 89334224 89334572 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062076.1 MGP_BALBcJ_G0027463.1 mouse_genomes_project 3 89599265 89618885 + MGP_BALBcJ_P0062076 protein_coding protein_coding MGP_BALBcJ_T0062078.1 MGP_BALBcJ_G0027463.1 mouse_genomes_project 3 89616044 89616726 + MGP_BALBcJ_P0062078 protein_coding protein_coding MGP_BALBcJ_T0101090.1 MGP_BALBcJ_G0039126.1 mouse_genomes_project 3 151938419 151938500 - Gm24494 snoRNA snoRNA MGP_BALBcJ_T0007458.1 MGP_BALBcJ_G0006107.1 mouse_genomes_project 3 20293096 20339732 + 4930412E21Rik lincRNA lincRNA MGP_BALBcJ_T0014151.1 MGP_BALBcJ_G0012248.1 mouse_genomes_project 3 89542573 89543659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010479.1 MGP_BALBcJ_G0008604.1 mouse_genomes_project 3 14673297 14673406 + Mir124a-2 miRNA miRNA MGP_BALBcJ_T0060748.1 MGP_BALBcJ_G0027181.1 mouse_genomes_project 3 50732664 50732853 + MGP_BALBcJ_P0060748 Gm10985 protein_coding protein_coding MGP_BALBcJ_T0062685.1 MGP_BALBcJ_G0027637.1 mouse_genomes_project 3 97817254 97841524 - MGP_BALBcJ_P0062685 Wdr3 protein_coding protein_coding MGP_BALBcJ_T0062686.1 MGP_BALBcJ_G0027637.1 mouse_genomes_project 3 97817809 97820696 - Wdr3 protein_coding retained_intron MGP_BALBcJ_T0062687.1 MGP_BALBcJ_G0027637.1 mouse_genomes_project 3 97821573 97841524 - Wdr3 protein_coding retained_intron MGP_BALBcJ_T0062688.1 MGP_BALBcJ_G0027637.1 mouse_genomes_project 3 97821575 97822657 - Wdr3 protein_coding retained_intron MGP_BALBcJ_T0062689.1 MGP_BALBcJ_G0027637.1 mouse_genomes_project 3 97836574 97841514 - MGP_BALBcJ_P0062689 Wdr3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062690.1 MGP_BALBcJ_G0027637.1 mouse_genomes_project 3 97836574 97841449 - MGP_BALBcJ_P0062690 Wdr3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102497.1 MGP_BALBcJ_G0040313.1 mouse_genomes_project 3 111002229 111013260 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0064032.1 MGP_BALBcJ_G0027911.1 mouse_genomes_project 3 140363866 140380141 + MGP_BALBcJ_P0064032 Gbp7 protein_coding protein_coding MGP_BALBcJ_T0064033.1 MGP_BALBcJ_G0027911.1 mouse_genomes_project 3 140363866 140383237 + MGP_BALBcJ_P0064033 Gbp7 protein_coding protein_coding MGP_BALBcJ_T0062514.1 MGP_BALBcJ_G0027587.1 mouse_genomes_project 3 93823949 93824330 + MGP_BALBcJ_P0062514 Hist2h2bb protein_coding protein_coding MGP_BALBcJ_T0014039.1 MGP_BALBcJ_G0012136.1 mouse_genomes_project 3 54838024 54839203 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062263.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92564904 92615358 - MGP_BALBcJ_P0062263 Pip5k1a protein_coding protein_coding MGP_BALBcJ_T0062264.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92564917 92615413 - MGP_BALBcJ_P0062264 Pip5k1a protein_coding protein_coding MGP_BALBcJ_T0062265.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92564919 92615339 - MGP_BALBcJ_P0062265 Pip5k1a protein_coding protein_coding MGP_BALBcJ_T0062266.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92564943 92615262 - MGP_BALBcJ_P0062266 Pip5k1a protein_coding protein_coding MGP_BALBcJ_T0062267.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92578058 92586458 - Pip5k1a protein_coding processed_transcript MGP_BALBcJ_T0062268.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92586046 92591179 - Pip5k1a protein_coding retained_intron MGP_BALBcJ_T0062269.1 MGP_BALBcJ_G0027537.1 mouse_genomes_project 3 92605160 92615306 - Pip5k1a protein_coding processed_transcript MGP_BALBcJ_T0101911.1 MGP_BALBcJ_G0039795.1 mouse_genomes_project 3 136190438 136199088 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101912.1 MGP_BALBcJ_G0039795.1 mouse_genomes_project 3 136192499 136206194 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101913.1 MGP_BALBcJ_G0039795.1 mouse_genomes_project 3 136200788 136207266 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0007421.1 MGP_BALBcJ_G0006083.1 mouse_genomes_project 3 5435083 5440352 + Gm32496 lincRNA lincRNA MGP_BALBcJ_T0014110.1 MGP_BALBcJ_G0012207.1 mouse_genomes_project 3 75134418 75135830 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061124.1 MGP_BALBcJ_G0027265.1 mouse_genomes_project 3 66099163 66112932 - MGP_BALBcJ_P0061124 Trim59 protein_coding protein_coding MGP_BALBcJ_T0061125.1 MGP_BALBcJ_G0027265.1 mouse_genomes_project 3 66100530 66112892 - MGP_BALBcJ_P0061125 Trim59 protein_coding protein_coding MGP_BALBcJ_T0061126.1 MGP_BALBcJ_G0027265.1 mouse_genomes_project 3 66111712 66112892 - Trim59 protein_coding retained_intron MGP_BALBcJ_T0061127.1 MGP_BALBcJ_G0027265.1 mouse_genomes_project 3 66111938 66112900 - Trim59 protein_coding processed_transcript MGP_BALBcJ_T0062167.1 MGP_BALBcJ_G0027521.1 mouse_genomes_project 3 91829114 91832636 + Mrpl9 protein_coding retained_intron MGP_BALBcJ_T0062168.1 MGP_BALBcJ_G0027521.1 mouse_genomes_project 3 91829121 91834503 + MGP_BALBcJ_P0062168 Mrpl9 protein_coding protein_coding MGP_BALBcJ_T0062169.1 MGP_BALBcJ_G0027521.1 mouse_genomes_project 3 91829133 91836927 + MGP_BALBcJ_P0062169 Mrpl9 protein_coding protein_coding MGP_BALBcJ_T0014239.1 MGP_BALBcJ_G0012336.1 mouse_genomes_project 3 110102740 110103527 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004191.1 MGP_BALBcJ_G0003694.1 mouse_genomes_project 3 26836990 26875652 + Mecomos antisense antisense MGP_BALBcJ_T0004192.1 MGP_BALBcJ_G0003694.1 mouse_genomes_project 3 26842131 26847842 + Mecomos antisense antisense MGP_BALBcJ_T0007500.1 MGP_BALBcJ_G0006142.1 mouse_genomes_project 3 38290693 38295002 - Gm42434 lincRNA lincRNA MGP_BALBcJ_T0007501.1 MGP_BALBcJ_G0006142.1 mouse_genomes_project 3 38294877 38295508 - Gm42434 lincRNA lincRNA MGP_BALBcJ_T0062048.1 MGP_BALBcJ_G0027446.1 mouse_genomes_project 3 87843377 87844661 + MGP_BALBcJ_P0062048 S100a2 protein_coding protein_coding MGP_BALBcJ_T0014325.1 MGP_BALBcJ_G0012422.1 mouse_genomes_project 3 136498594 136498783 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063947.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136000568 136017854 + MGP_BALBcJ_P0063947 Trmt10a protein_coding protein_coding MGP_BALBcJ_T0063948.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136000589 136012957 + Trmt10a protein_coding retained_intron MGP_BALBcJ_T0063949.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136000637 136017851 + MGP_BALBcJ_P0063949 Trmt10a protein_coding protein_coding MGP_BALBcJ_T0063950.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136000919 136005494 + MGP_BALBcJ_P0063950 Trmt10a protein_coding protein_coding MGP_BALBcJ_T0063951.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136000981 136005596 + MGP_BALBcJ_P0063951 Trmt10a protein_coding protein_coding MGP_BALBcJ_T0063952.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136000993 136014082 + MGP_BALBcJ_P0063952 Trmt10a protein_coding unknown_likely_coding MGP_BALBcJ_T0063953.1 MGP_BALBcJ_G0027894.1 mouse_genomes_project 3 136001030 136007615 + MGP_BALBcJ_P0063953 Trmt10a protein_coding protein_coding MGP_BALBcJ_T0017944.1 MGP_BALBcJ_G0015456.1 mouse_genomes_project 3 104215437 104219379 - 2010016I18Rik processed_transcript antisense MGP_BALBcJ_T0017945.1 MGP_BALBcJ_G0015456.1 mouse_genomes_project 3 104215455 104217290 - 2010016I18Rik processed_transcript antisense MGP_BALBcJ_T0017946.1 MGP_BALBcJ_G0015456.1 mouse_genomes_project 3 104215468 104216917 - 2010016I18Rik processed_transcript retained_intron MGP_BALBcJ_T0017947.1 MGP_BALBcJ_G0015456.1 mouse_genomes_project 3 104215468 104216893 - 2010016I18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017948.1 MGP_BALBcJ_G0015456.1 mouse_genomes_project 3 104217525 104219314 - 2010016I18Rik processed_transcript retained_intron MGP_BALBcJ_T0063361.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114545053 114584011 - MGP_BALBcJ_P0063361 Slc35a3 protein_coding protein_coding MGP_BALBcJ_T0063362.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114545528 114591428 - MGP_BALBcJ_P0063362 Slc35a3 protein_coding protein_coding MGP_BALBcJ_T0063363.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114545569 114548332 - Slc35a3 protein_coding processed_transcript MGP_BALBcJ_T0063364.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114553007 114583622 - MGP_BALBcJ_P0063364 Slc35a3 protein_coding protein_coding MGP_BALBcJ_T0063365.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114553142 114583992 - MGP_BALBcJ_P0063365 Slc35a3 protein_coding protein_coding MGP_BALBcJ_T0063366.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114562000 114584037 - Slc35a3 protein_coding retained_intron MGP_BALBcJ_T0063367.1 MGP_BALBcJ_G0027787.1 mouse_genomes_project 3 114565919 114584604 - MGP_BALBcJ_P0063367 Slc35a3 protein_coding protein_coding MGP_BALBcJ_T0007610.1 MGP_BALBcJ_G0006223.1 mouse_genomes_project 3 98162047 98196162 + Gm12474 lincRNA lincRNA MGP_BALBcJ_T0062984.1 MGP_BALBcJ_G0027699.1 mouse_genomes_project 3 103733972 103753870 - MGP_BALBcJ_P0062984 Pifo protein_coding protein_coding MGP_BALBcJ_T0062985.1 MGP_BALBcJ_G0027699.1 mouse_genomes_project 3 103733981 103739998 - MGP_BALBcJ_P0062985 Pifo protein_coding protein_coding MGP_BALBcJ_T0101034.1 MGP_BALBcJ_G0039070.1 mouse_genomes_project 3 50407963 50408082 + Gm23675 snoRNA snoRNA MGP_BALBcJ_T0061233.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77841428 77962358 - MGP_BALBcJ_P0061233 Gria2 protein_coding protein_coding MGP_BALBcJ_T0061234.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77847900 77962358 - MGP_BALBcJ_P0061234 Gria2 protein_coding protein_coding MGP_BALBcJ_T0061235.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77848145 77962102 - MGP_BALBcJ_P0061235 Gria2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061236.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77851584 77962314 - Gria2 protein_coding retained_intron MGP_BALBcJ_T0061237.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77865167 77962173 - Gria2 protein_coding retained_intron MGP_BALBcJ_T0061238.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77866878 77962247 - Gria2 protein_coding retained_intron MGP_BALBcJ_T0061239.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77868118 77962303 - Gria2 protein_coding retained_intron MGP_BALBcJ_T0061240.1 MGP_BALBcJ_G0027292.1 mouse_genomes_project 3 77958965 77962216 - Gria2 protein_coding retained_intron MGP_BALBcJ_T0061765.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86424095 86435689 + MGP_BALBcJ_P0061765 Thbs3 protein_coding protein_coding MGP_BALBcJ_T0061766.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86424120 86426982 + MGP_BALBcJ_P0061766 Thbs3 protein_coding protein_coding MGP_BALBcJ_T0061767.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86424142 86435689 + Thbs3 protein_coding retained_intron MGP_BALBcJ_T0061768.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86424148 86435656 + MGP_BALBcJ_P0061768 Thbs3 protein_coding protein_coding MGP_BALBcJ_T0061769.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86426316 86427984 + Thbs3 protein_coding retained_intron MGP_BALBcJ_T0061770.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86429993 86432018 + Thbs3 protein_coding processed_transcript MGP_BALBcJ_T0061772.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86432981 86434399 + Thbs3 protein_coding retained_intron MGP_BALBcJ_T0061773.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86433130 86435555 + MGP_BALBcJ_P0061773 Thbs3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061774.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86433171 86434267 + Thbs3 protein_coding retained_intron MGP_BALBcJ_T0061775.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86434018 86435415 + Thbs3 protein_coding retained_intron MGP_BALBcJ_T0061776.1 MGP_BALBcJ_G0027396.1 mouse_genomes_project 3 86435101 86435638 + Thbs3 protein_coding retained_intron MGP_BALBcJ_T0063187.1 MGP_BALBcJ_G0027752.1 mouse_genomes_project 3 106319347 106325324 - MGP_BALBcJ_P0063187 protein_coding protein_coding MGP_BALBcJ_T0063188.1 MGP_BALBcJ_G0027752.1 mouse_genomes_project 3 106319347 106325620 - MGP_BALBcJ_P0063188 protein_coding protein_coding MGP_BALBcJ_T0007547.1 MGP_BALBcJ_G0006176.1 mouse_genomes_project 3 70432487 70580930 + Gm38353 lincRNA lincRNA MGP_BALBcJ_T0060803.1 MGP_BALBcJ_G0027192.1 mouse_genomes_project 3 51957285 51962433 - MGP_BALBcJ_P0060803 Ccna1 protein_coding protein_coding MGP_BALBcJ_T0060804.1 MGP_BALBcJ_G0027192.1 mouse_genomes_project 3 51957291 51966821 - MGP_BALBcJ_P0060804 Ccna1 protein_coding protein_coding MGP_BALBcJ_T0060805.1 MGP_BALBcJ_G0027192.1 mouse_genomes_project 3 51957293 51966808 - MGP_BALBcJ_P0060805 Ccna1 protein_coding protein_coding MGP_BALBcJ_T0060806.1 MGP_BALBcJ_G0027192.1 mouse_genomes_project 3 51957294 51967267 - MGP_BALBcJ_P0060806 Ccna1 protein_coding protein_coding MGP_BALBcJ_T0060807.1 MGP_BALBcJ_G0027192.1 mouse_genomes_project 3 51962380 51967248 - MGP_BALBcJ_P0060807 Ccna1 protein_coding protein_coding MGP_BALBcJ_T0060808.1 MGP_BALBcJ_G0027192.1 mouse_genomes_project 3 51962774 51966803 - MGP_BALBcJ_P0060808 Ccna1 protein_coding protein_coding MGP_BALBcJ_T0101044.1 MGP_BALBcJ_G0039080.1 mouse_genomes_project 3 74260011 74260088 - Gm23644 snoRNA snoRNA MGP_BALBcJ_T0017978.1 MGP_BALBcJ_G0015465.1 mouse_genomes_project 3 133709652 133715993 - 4933401H06Rik processed_transcript macro_lncRNA MGP_BALBcJ_T0017979.1 MGP_BALBcJ_G0015465.1 mouse_genomes_project 3 133709755 133715993 - 4933401H06Rik processed_transcript antisense MGP_BALBcJ_T0009436.1 MGP_BALBcJ_G0007561.1 mouse_genomes_project 3 142893983 142904419 + Gm43742 macro_lncRNA macro_lncRNA MGP_BALBcJ_T0061013.1 MGP_BALBcJ_G0027242.1 mouse_genomes_project 3 61199411 61234029 - MGP_BALBcJ_P0061013 Vmn2r3 protein_coding protein_coding MGP_BALBcJ_T0061014.1 MGP_BALBcJ_G0027242.1 mouse_genomes_project 3 61199411 61234170 - MGP_BALBcJ_P0061014 Vmn2r3 protein_coding protein_coding MGP_BALBcJ_T0099740.1 MGP_BALBcJ_G0037776.1 mouse_genomes_project 3 57036090 57036196 - Gm24382 snRNA snRNA MGP_BALBcJ_T0064101.1 MGP_BALBcJ_G0027928.1 mouse_genomes_project 3 142989709 143018512 - MGP_BALBcJ_P0064101 Clca2 protein_coding protein_coding MGP_BALBcJ_T0064102.1 MGP_BALBcJ_G0027928.1 mouse_genomes_project 3 142991203 143018514 - MGP_BALBcJ_P0064102 Clca2 protein_coding protein_coding MGP_BALBcJ_T0064103.1 MGP_BALBcJ_G0027928.1 mouse_genomes_project 3 143018251 143018851 - Clca2 protein_coding processed_transcript MGP_BALBcJ_T0063691.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127715994 127733556 - Rrh protein_coding processed_transcript MGP_BALBcJ_T0063692.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127720158 127733568 - MGP_BALBcJ_P0063692 Rrh protein_coding protein_coding MGP_BALBcJ_T0063693.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127720161 127733554 - MGP_BALBcJ_P0063693 Rrh protein_coding protein_coding MGP_BALBcJ_T0063694.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127720387 127733650 - MGP_BALBcJ_P0063694 Rrh protein_coding protein_coding MGP_BALBcJ_T0063695.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127720495 127733525 - MGP_BALBcJ_P0063695 Rrh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063696.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127726232 127733557 - Rrh protein_coding processed_transcript MGP_BALBcJ_T0063697.1 MGP_BALBcJ_G0027844.1 mouse_genomes_project 3 127730528 127733521 - Rrh protein_coding retained_intron MGP_BALBcJ_T0001200.1 MGP_BALBcJ_G0001123.1 mouse_genomes_project 3 48948716 48950515 - TEC TEC MGP_BALBcJ_T0014237.1 MGP_BALBcJ_G0012334.1 mouse_genomes_project 3 109599210 109599604 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013900.1 MGP_BALBcJ_G0011997.1 mouse_genomes_project 3 9439183 9439769 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063200.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106423676 106448658 + MGP_BALBcJ_P0063200 Clcc1 protein_coding protein_coding MGP_BALBcJ_T0063201.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106423712 106432830 + Clcc1 protein_coding processed_transcript MGP_BALBcJ_T0063202.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106423720 106437899 + Clcc1 protein_coding processed_transcript MGP_BALBcJ_T0063203.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106423721 106448654 + MGP_BALBcJ_P0063203 Clcc1 protein_coding protein_coding MGP_BALBcJ_T0063204.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106423721 106433379 + MGP_BALBcJ_P0063204 Clcc1 protein_coding protein_coding MGP_BALBcJ_T0063205.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106423753 106447830 + MGP_BALBcJ_P0063205 Clcc1 protein_coding protein_coding MGP_BALBcJ_T0063206.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106433022 106438645 + Clcc1 protein_coding processed_transcript MGP_BALBcJ_T0063207.1 MGP_BALBcJ_G0027755.1 mouse_genomes_project 3 106437672 106438651 + Clcc1 protein_coding retained_intron MGP_BALBcJ_T0014280.1 MGP_BALBcJ_G0012377.1 mouse_genomes_project 3 122439564 122440195 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014162.1 MGP_BALBcJ_G0012259.1 mouse_genomes_project 3 90752540 90753323 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098893.1 MGP_BALBcJ_G0036940.1 mouse_genomes_project 3 98354283 98356087 - Gm43463 sense_intronic sense_intronic MGP_BALBcJ_T0007524.1 MGP_BALBcJ_G0006159.1 mouse_genomes_project 3 50815723 50834416 + Gm31026 lincRNA lincRNA MGP_BALBcJ_T0014247.1 MGP_BALBcJ_G0012344.1 mouse_genomes_project 3 111726225 111727877 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062074.1 MGP_BALBcJ_G0027461.1 mouse_genomes_project 3 89530352 89618886 + MGP_BALBcJ_P0062074 Sprr2a2 protein_coding protein_coding MGP_BALBcJ_T0001135.1 MGP_BALBcJ_G0001060.1 mouse_genomes_project 3 30754587 30755535 + TEC TEC MGP_BALBcJ_T0101023.1 MGP_BALBcJ_G0039059.1 mouse_genomes_project 3 24693391 24693552 + Gm26040 snoRNA snoRNA MGP_BALBcJ_T0063071.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105401497 105416143 - MGP_BALBcJ_P0063071 Ahcyl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063072.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105401499 105434903 - MGP_BALBcJ_P0063072 Ahcyl1 protein_coding protein_coding MGP_BALBcJ_T0063073.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105402332 105403974 - Ahcyl1 protein_coding processed_transcript MGP_BALBcJ_T0063074.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105402862 105408950 - Ahcyl1 protein_coding retained_intron MGP_BALBcJ_T0063075.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105403769 105405861 - Ahcyl1 protein_coding retained_intron MGP_BALBcJ_T0063076.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105406627 105407887 - Ahcyl1 protein_coding retained_intron MGP_BALBcJ_T0063077.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105409523 105434306 - MGP_BALBcJ_P0063077 Ahcyl1 protein_coding protein_coding MGP_BALBcJ_T0063078.1 MGP_BALBcJ_G0027726.1 mouse_genomes_project 3 105410111 105434848 - Ahcyl1 protein_coding retained_intron MGP_BALBcJ_T0001263.1 MGP_BALBcJ_G0001186.1 mouse_genomes_project 3 93474716 93477196 + TEC TEC MGP_BALBcJ_T0001119.1 MGP_BALBcJ_G0001044.1 mouse_genomes_project 3 25993253 25995980 + TEC TEC MGP_BALBcJ_T0014363.1 MGP_BALBcJ_G0012460.1 mouse_genomes_project 3 155465258 155473125 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098938.1 MGP_BALBcJ_G0036985.1 mouse_genomes_project 3 151306733 151308879 - 1700012D16Rik sense_intronic sense_intronic MGP_BALBcJ_T0062850.1 MGP_BALBcJ_G0027670.1 mouse_genomes_project 3 101516435 101522914 - Dclre1b protein_coding retained_intron MGP_BALBcJ_T0062851.1 MGP_BALBcJ_G0027670.1 mouse_genomes_project 3 101516453 101521789 - MGP_BALBcJ_P0062851 Dclre1b protein_coding protein_coding MGP_BALBcJ_T0062852.1 MGP_BALBcJ_G0027670.1 mouse_genomes_project 3 101516518 101522678 - MGP_BALBcJ_P0062852 Dclre1b protein_coding protein_coding MGP_BALBcJ_T0062853.1 MGP_BALBcJ_G0027670.1 mouse_genomes_project 3 101517149 101521246 - Dclre1b protein_coding retained_intron MGP_BALBcJ_T0062854.1 MGP_BALBcJ_G0027670.1 mouse_genomes_project 3 101517577 101522782 - MGP_BALBcJ_P0062854 Dclre1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062855.1 MGP_BALBcJ_G0027670.1 mouse_genomes_project 3 101519482 101522978 - MGP_BALBcJ_P0062855 Dclre1b protein_coding protein_coding MGP_BALBcJ_T0001340.1 MGP_BALBcJ_G0001262.1 mouse_genomes_project 3 127280373 127283821 + TEC TEC MGP_BALBcJ_T0007742.1 MGP_BALBcJ_G0006330.1 mouse_genomes_project 3 147541860 147641233 - Gm31121 lincRNA lincRNA MGP_BALBcJ_T0063447.1 MGP_BALBcJ_G0027802.1 mouse_genomes_project 3 119564567 119576785 + MGP_BALBcJ_P0063447 4930432M17Rik protein_coding protein_coding MGP_BALBcJ_T0063448.1 MGP_BALBcJ_G0027802.1 mouse_genomes_project 3 119565122 119576638 + MGP_BALBcJ_P0063448 4930432M17Rik protein_coding protein_coding MGP_BALBcJ_T0062469.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463219 93480622 + MGP_BALBcJ_P0062469 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062470.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463224 93480692 + MGP_BALBcJ_P0062470 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062471.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463266 93480499 + MGP_BALBcJ_P0062471 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062472.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463327 93482330 + MGP_BALBcJ_P0062472 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062473.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463482 93480604 + MGP_BALBcJ_P0062473 Anp32e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062474.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463523 93480375 + MGP_BALBcJ_P0062474 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062475.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93463538 93482452 + MGP_BALBcJ_P0062475 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062476.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93464477 93471792 + MGP_BALBcJ_P0062476 Anp32e protein_coding protein_coding MGP_BALBcJ_T0062477.1 MGP_BALBcJ_G0027572.1 mouse_genomes_project 3 93479258 93480580 + Anp32e protein_coding retained_intron MGP_BALBcJ_T0101691.1 MGP_BALBcJ_G0039674.1 mouse_genomes_project 3 94181513 94206190 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101692.1 MGP_BALBcJ_G0039674.1 mouse_genomes_project 3 94181516 94206189 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101693.1 MGP_BALBcJ_G0039674.1 mouse_genomes_project 3 94182479 94183581 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0014284.1 MGP_BALBcJ_G0012381.1 mouse_genomes_project 3 125414942 125415288 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001176.1 MGP_BALBcJ_G0001101.1 mouse_genomes_project 3 47788197 47790848 - TEC TEC MGP_BALBcJ_T0014026.1 MGP_BALBcJ_G0012123.1 mouse_genomes_project 3 50917800 50918435 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010499.1 MGP_BALBcJ_G0008624.1 mouse_genomes_project 3 66072656 66072720 + Mir15b miRNA miRNA MGP_BALBcJ_T0013977.1 MGP_BALBcJ_G0012074.1 mouse_genomes_project 3 34635934 34636309 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014140.1 MGP_BALBcJ_G0012237.1 mouse_genomes_project 3 85526818 85526965 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060106.1 MGP_BALBcJ_G0027067.1 mouse_genomes_project 3 16528481 16575154 + MGP_BALBcJ_P0060106 Trim55 protein_coding protein_coding MGP_BALBcJ_T0060107.1 MGP_BALBcJ_G0027067.1 mouse_genomes_project 3 16528515 16534046 + Trim55 protein_coding processed_transcript MGP_BALBcJ_T0063777.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130489533 130513864 - MGP_BALBcJ_P0063777 Aimp1 protein_coding protein_coding MGP_BALBcJ_T0063778.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130500816 130503812 - Aimp1 protein_coding retained_intron MGP_BALBcJ_T0063779.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130501079 130507219 - Aimp1 protein_coding retained_intron MGP_BALBcJ_T0063780.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130503041 130514350 - MGP_BALBcJ_P0063780 Aimp1 protein_coding protein_coding MGP_BALBcJ_T0063781.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130503131 130514102 - MGP_BALBcJ_P0063781 Aimp1 protein_coding protein_coding MGP_BALBcJ_T0063782.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130503147 130513817 - MGP_BALBcJ_P0063782 Aimp1 protein_coding protein_coding MGP_BALBcJ_T0063783.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130503842 130514104 - MGP_BALBcJ_P0063783 Aimp1 protein_coding protein_coding MGP_BALBcJ_T0063784.1 MGP_BALBcJ_G0027863.1 mouse_genomes_project 3 130509858 130513816 - Aimp1 protein_coding retained_intron MGP_BALBcJ_T0004241.1 MGP_BALBcJ_G0003730.1 mouse_genomes_project 3 62893496 62937098 - Gm37359 antisense antisense MGP_BALBcJ_T0101037.1 MGP_BALBcJ_G0039073.1 mouse_genomes_project 3 53946521 53946651 + Gm22269 snoRNA snoRNA MGP_BALBcJ_T0004331.1 MGP_BALBcJ_G0003784.1 mouse_genomes_project 3 106480950 106484696 + Gm27244 antisense antisense MGP_BALBcJ_T0060933.1 MGP_BALBcJ_G0027221.1 mouse_genomes_project 3 56592956 56617733 + MGP_BALBcJ_P0060933 Gm5538 protein_coding protein_coding MGP_BALBcJ_T0063785.1 MGP_BALBcJ_G0027864.1 mouse_genomes_project 3 130514123 130670500 + MGP_BALBcJ_P0063785 Tbck protein_coding protein_coding MGP_BALBcJ_T0063786.1 MGP_BALBcJ_G0027864.1 mouse_genomes_project 3 130514147 130529024 + Tbck protein_coding retained_intron MGP_BALBcJ_T0063787.1 MGP_BALBcJ_G0027864.1 mouse_genomes_project 3 130514179 130628294 + Tbck protein_coding processed_transcript MGP_BALBcJ_T0063788.1 MGP_BALBcJ_G0027864.1 mouse_genomes_project 3 130618369 130667352 + Tbck protein_coding processed_transcript MGP_BALBcJ_T0010532.1 MGP_BALBcJ_G0008657.1 mouse_genomes_project 3 120444796 120444853 - Mir7657 miRNA miRNA MGP_BALBcJ_T0007645.1 MGP_BALBcJ_G0006252.1 mouse_genomes_project 3 114952225 114968804 - 1700061I17Rik lincRNA lincRNA MGP_BALBcJ_T0007540.1 MGP_BALBcJ_G0006170.1 mouse_genomes_project 3 64634976 64637235 - 4930402C01Rik lincRNA lincRNA MGP_BALBcJ_T0062292.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676125 92680212 + Sema6c protein_coding processed_transcript MGP_BALBcJ_T0062293.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676162 92680097 + Sema6c protein_coding processed_transcript MGP_BALBcJ_T0062294.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676162 92684016 + MGP_BALBcJ_P0062294 Sema6c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062295.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676162 92689324 + MGP_BALBcJ_P0062295 Sema6c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062296.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676169 92680151 + MGP_BALBcJ_P0062296 Sema6c protein_coding protein_coding MGP_BALBcJ_T0062297.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676173 92689695 + Sema6c protein_coding retained_intron MGP_BALBcJ_T0062298.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676173 92689695 + MGP_BALBcJ_P0062298 Sema6c protein_coding protein_coding MGP_BALBcJ_T0062299.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676173 92689695 + MGP_BALBcJ_P0062299 Sema6c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062300.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92676173 92689695 + MGP_BALBcJ_P0062300 Sema6c protein_coding protein_coding MGP_BALBcJ_T0062301.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92679975 92689533 + MGP_BALBcJ_P0062301 Sema6c protein_coding protein_coding MGP_BALBcJ_T0062302.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92679975 92689695 + MGP_BALBcJ_P0062302 Sema6c protein_coding protein_coding MGP_BALBcJ_T0062303.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92680043 92688987 + MGP_BALBcJ_P0062303 Sema6c protein_coding protein_coding MGP_BALBcJ_T0062304.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92683881 92685811 + Sema6c protein_coding processed_transcript MGP_BALBcJ_T0062305.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92685993 92687566 + Sema6c protein_coding retained_intron MGP_BALBcJ_T0062306.1 MGP_BALBcJ_G0027544.1 mouse_genomes_project 3 92686475 92687647 + Sema6c protein_coding retained_intron MGP_BALBcJ_T0007717.1 MGP_BALBcJ_G0006311.1 mouse_genomes_project 3 141515810 141517588 + Gm42704 lincRNA lincRNA MGP_BALBcJ_T0013892.1 MGP_BALBcJ_G0011989.1 mouse_genomes_project 3 6793939 6794753 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001147.1 MGP_BALBcJ_G0001072.1 mouse_genomes_project 3 34388121 34394087 + TEC TEC MGP_BALBcJ_T0014032.1 MGP_BALBcJ_G0012129.1 mouse_genomes_project 3 54156492 54157121 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001226.1 MGP_BALBcJ_G0001149.1 mouse_genomes_project 3 60423493 60423979 + TEC TEC MGP_BALBcJ_T0001399.1 MGP_BALBcJ_G0001321.1 mouse_genomes_project 3 156533144 156534169 + TEC TEC MGP_BALBcJ_T0062499.1 MGP_BALBcJ_G0027577.1 mouse_genomes_project 3 93716827 93724732 + MGP_BALBcJ_P0062499 Sf3b4 protein_coding protein_coding MGP_BALBcJ_T0062500.1 MGP_BALBcJ_G0027577.1 mouse_genomes_project 3 93717041 93717841 + Sf3b4 protein_coding retained_intron MGP_BALBcJ_T0014220.1 MGP_BALBcJ_G0012317.1 mouse_genomes_project 3 105521400 105522016 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099749.1 MGP_BALBcJ_G0037785.1 mouse_genomes_project 3 76974192 76974295 + Gm26420 snRNA snRNA MGP_BALBcJ_T0007493.1 MGP_BALBcJ_G0006137.1 mouse_genomes_project 3 35510804 35512116 + Gm43538 lincRNA lincRNA MGP_BALBcJ_T0013972.1 MGP_BALBcJ_G0012069.1 mouse_genomes_project 3 34017043 34018148 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061712.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86372963 86385759 + MGP_BALBcJ_P0061712 Clk2 protein_coding protein_coding MGP_BALBcJ_T0061713.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86372985 86375373 + MGP_BALBcJ_P0061713 Clk2 protein_coding protein_coding MGP_BALBcJ_T0061714.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86372986 86385759 + MGP_BALBcJ_P0061714 Clk2 protein_coding protein_coding MGP_BALBcJ_T0061715.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86372987 86385757 + Clk2 protein_coding retained_intron MGP_BALBcJ_T0061716.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86372987 86382295 + MGP_BALBcJ_P0061716 Clk2 protein_coding protein_coding MGP_BALBcJ_T0061717.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86373008 86385759 + MGP_BALBcJ_P0061717 Clk2 protein_coding protein_coding MGP_BALBcJ_T0061718.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86373147 86385759 + MGP_BALBcJ_P0061718 Clk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061719.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86375203 86385417 + MGP_BALBcJ_P0061719 Clk2 protein_coding unknown_likely_coding MGP_BALBcJ_T0061720.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86375332 86378578 + Clk2 protein_coding retained_intron MGP_BALBcJ_T0061721.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86381002 86384918 + Clk2 protein_coding retained_intron MGP_BALBcJ_T0061722.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86382792 86384585 + Clk2 protein_coding retained_intron MGP_BALBcJ_T0061723.1 MGP_BALBcJ_G0027391.1 mouse_genomes_project 3 86383872 86384809 + Clk2 protein_coding processed_transcript MGP_BALBcJ_T0014029.1 MGP_BALBcJ_G0012126.1 mouse_genomes_project 3 53732389 53732860 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007521.1 MGP_BALBcJ_G0006156.1 mouse_genomes_project 3 49814326 49827263 - Gm20750 lincRNA lincRNA MGP_BALBcJ_T0099054.1 MGP_BALBcJ_G0037091.1 mouse_genomes_project 3 143349618 143350653 + D530037P16Rik sense_overlapping sense_overlapping MGP_BALBcJ_T0059951.1 MGP_BALBcJ_G0027016.1 mouse_genomes_project 3 304251 481245 + MGP_BALBcJ_P0059951 Hnf4g protein_coding protein_coding MGP_BALBcJ_T0059952.1 MGP_BALBcJ_G0027016.1 mouse_genomes_project 3 457113 481453 + MGP_BALBcJ_P0059952 Hnf4g protein_coding protein_coding MGP_BALBcJ_T0062562.1 MGP_BALBcJ_G0027602.1 mouse_genomes_project 3 94287027 94289508 - MGP_BALBcJ_P0062562 Nudt17 protein_coding protein_coding MGP_BALBcJ_T0062563.1 MGP_BALBcJ_G0027602.1 mouse_genomes_project 3 94287028 94288204 - Nudt17 protein_coding retained_intron MGP_BALBcJ_T0062564.1 MGP_BALBcJ_G0027602.1 mouse_genomes_project 3 94287029 94289523 - MGP_BALBcJ_P0062564 Nudt17 protein_coding protein_coding MGP_BALBcJ_T0062565.1 MGP_BALBcJ_G0027602.1 mouse_genomes_project 3 94287128 94289500 - MGP_BALBcJ_P0062565 Nudt17 protein_coding protein_coding MGP_BALBcJ_T0101078.1 MGP_BALBcJ_G0039114.1 mouse_genomes_project 3 126459423 126459532 + Gm22293 snoRNA snoRNA MGP_BALBcJ_T0099789.1 MGP_BALBcJ_G0037825.1 mouse_genomes_project 3 122264562 122264672 + Gm22575 snRNA snRNA MGP_BALBcJ_T0062857.1 MGP_BALBcJ_G0027672.1 mouse_genomes_project 3 101523160 101554616 + MGP_BALBcJ_P0062857 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014317.1 MGP_BALBcJ_G0012414.1 mouse_genomes_project 3 134841228 134841544 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062365.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957314 93015942 + Arnt protein_coding retained_intron MGP_BALBcJ_T0062366.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957314 93019887 + MGP_BALBcJ_P0062366 Arnt protein_coding protein_coding MGP_BALBcJ_T0062367.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957316 93021562 + MGP_BALBcJ_P0062367 Arnt protein_coding protein_coding MGP_BALBcJ_T0062368.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957330 93021559 + MGP_BALBcJ_P0062368 Arnt protein_coding protein_coding MGP_BALBcJ_T0062369.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957354 92985559 + MGP_BALBcJ_P0062369 Arnt protein_coding protein_coding MGP_BALBcJ_T0062370.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957354 93019891 + MGP_BALBcJ_P0062370 Arnt protein_coding protein_coding MGP_BALBcJ_T0062371.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92957445 93017010 + Arnt protein_coding retained_intron MGP_BALBcJ_T0062372.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92990980 93019887 + Arnt protein_coding retained_intron MGP_BALBcJ_T0062373.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 92998578 93004688 + Arnt protein_coding retained_intron MGP_BALBcJ_T0062374.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 93000557 93011685 + MGP_BALBcJ_P0062374 Arnt protein_coding protein_coding MGP_BALBcJ_T0062375.1 MGP_BALBcJ_G0027555.1 mouse_genomes_project 3 93013778 93014780 + Arnt protein_coding retained_intron MGP_BALBcJ_T0061398.1 MGP_BALBcJ_G0027334.1 mouse_genomes_project 3 84573320 84586318 + MGP_BALBcJ_P0061398 Cd5l protein_coding protein_coding MGP_BALBcJ_T0061211.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76747928 76772805 - MGP_BALBcJ_P0061211 Etfdh protein_coding protein_coding MGP_BALBcJ_T0061212.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76747943 76772639 - MGP_BALBcJ_P0061212 Etfdh protein_coding protein_coding MGP_BALBcJ_T0061213.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76759744 76772625 - Etfdh protein_coding retained_intron MGP_BALBcJ_T0061214.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76761329 76772805 - Etfdh protein_coding retained_intron MGP_BALBcJ_T0061215.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76763508 76772660 - Etfdh protein_coding retained_intron MGP_BALBcJ_T0061216.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76772190 76773442 - Etfdh protein_coding retained_intron MGP_BALBcJ_T0061217.1 MGP_BALBcJ_G0027287.1 mouse_genomes_project 3 76772208 76772681 - Etfdh protein_coding processed_transcript MGP_BALBcJ_T0062281.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638044 92638985 - Scnm1 protein_coding retained_intron MGP_BALBcJ_T0062282.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638045 92641891 - Scnm1 protein_coding retained_intron MGP_BALBcJ_T0062283.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638047 92638614 - Scnm1 protein_coding retained_intron MGP_BALBcJ_T0062284.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638049 92638787 - Scnm1 protein_coding retained_intron MGP_BALBcJ_T0062285.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638049 92642013 - MGP_BALBcJ_P0062285 Scnm1 protein_coding protein_coding MGP_BALBcJ_T0062286.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638051 92639383 - Scnm1 protein_coding processed_transcript MGP_BALBcJ_T0062287.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638054 92642129 - MGP_BALBcJ_P0062287 Scnm1 protein_coding protein_coding MGP_BALBcJ_T0062288.1 MGP_BALBcJ_G0027540.1 mouse_genomes_project 3 92638618 92642057 - Scnm1 protein_coding retained_intron MGP_BALBcJ_T0063795.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130815530 130924602 - MGP_BALBcJ_P0063795 Gstcd protein_coding protein_coding MGP_BALBcJ_T0063796.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130816584 130924810 - MGP_BALBcJ_P0063796 Gstcd protein_coding protein_coding MGP_BALBcJ_T0063797.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130816895 130924401 - MGP_BALBcJ_P0063797 Gstcd protein_coding unknown_likely_coding MGP_BALBcJ_T0063798.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130827072 130843208 - Gstcd protein_coding retained_intron MGP_BALBcJ_T0063799.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130836361 130924524 - Gstcd protein_coding processed_transcript MGP_BALBcJ_T0063800.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130914005 130924555 - Gstcd protein_coding retained_intron MGP_BALBcJ_T0063801.1 MGP_BALBcJ_G0027866.1 mouse_genomes_project 3 130914201 130915905 - Gstcd protein_coding retained_intron MGP_BALBcJ_T0060712.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48536323 48557753 + Mgst2 protein_coding processed_transcript MGP_BALBcJ_T0060713.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48537141 48553022 + Mgst2 protein_coding processed_transcript MGP_BALBcJ_T0060714.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48537212 48558532 + MGP_BALBcJ_P0060714 Mgst2 protein_coding protein_coding MGP_BALBcJ_T0060715.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48547402 48558618 + Mgst2 protein_coding processed_transcript MGP_BALBcJ_T0060716.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48547854 48558465 + Mgst2 protein_coding processed_transcript MGP_BALBcJ_T0060717.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48551088 48558620 + Mgst2 protein_coding retained_intron MGP_BALBcJ_T0060718.1 MGP_BALBcJ_G0027172.1 mouse_genomes_project 3 48557567 48558623 + Mgst2 protein_coding retained_intron MGP_BALBcJ_T0101063.1 MGP_BALBcJ_G0039099.1 mouse_genomes_project 3 97974974 97975051 + Gm25802 snoRNA snoRNA MGP_BALBcJ_T0060242.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 25900073 25971494 + MGP_BALBcJ_P0060242 Egfem1 protein_coding protein_coding MGP_BALBcJ_T0060243.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 25900350 26404948 + MGP_BALBcJ_P0060243 Egfem1 protein_coding protein_coding MGP_BALBcJ_T0060244.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 25900623 26492395 + Egfem1 protein_coding retained_intron MGP_BALBcJ_T0060245.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 25900779 26509319 + MGP_BALBcJ_P0060245 Egfem1 protein_coding protein_coding MGP_BALBcJ_T0060246.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 25900817 26508620 + MGP_BALBcJ_P0060246 Egfem1 protein_coding protein_coding MGP_BALBcJ_T0060247.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 26279541 26469039 + Egfem1 protein_coding processed_transcript MGP_BALBcJ_T0060248.1 MGP_BALBcJ_G0027091.1 mouse_genomes_project 3 26336521 26491502 + MGP_BALBcJ_P0060248 Egfem1 protein_coding protein_coding MGP_BALBcJ_T0010483.1 MGP_BALBcJ_G0008608.1 mouse_genomes_project 3 24401051 24401147 - Mir3092 miRNA miRNA MGP_BALBcJ_T0064139.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143890016 143896833 + MGP_BALBcJ_P0064139 2410004B18Rik protein_coding protein_coding MGP_BALBcJ_T0064140.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143890044 143896831 + MGP_BALBcJ_P0064140 2410004B18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064141.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143890192 143895814 + MGP_BALBcJ_P0064141 2410004B18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064142.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143890238 143890790 + 2410004B18Rik protein_coding retained_intron MGP_BALBcJ_T0064143.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143890287 143896246 + MGP_BALBcJ_P0064143 2410004B18Rik protein_coding protein_coding MGP_BALBcJ_T0064144.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143890646 143895857 + 2410004B18Rik protein_coding retained_intron MGP_BALBcJ_T0064145.1 MGP_BALBcJ_G0027935.1 mouse_genomes_project 3 143891088 143896202 + MGP_BALBcJ_P0064145 2410004B18Rik protein_coding protein_coding MGP_BALBcJ_T0098760.1 MGP_BALBcJ_G0036814.1 mouse_genomes_project 3 85955581 85955709 + Gm25820 scaRNA scaRNA MGP_BALBcJ_T0063929.1 MGP_BALBcJ_G0027889.1 mouse_genomes_project 3 135773753 135774742 + protein_coding retained_intron MGP_BALBcJ_T0063930.1 MGP_BALBcJ_G0027889.1 mouse_genomes_project 3 135773799 135782067 + MGP_BALBcJ_P0063930 protein_coding protein_coding MGP_BALBcJ_T0063931.1 MGP_BALBcJ_G0027889.1 mouse_genomes_project 3 135774071 135782352 + protein_coding retained_intron MGP_BALBcJ_T0063932.1 MGP_BALBcJ_G0027889.1 mouse_genomes_project 3 135774137 135783271 + MGP_BALBcJ_P0063932 protein_coding unknown_likely_coding MGP_BALBcJ_T0060632.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38444541 38572028 - MGP_BALBcJ_P0060632 Sclt1 protein_coding protein_coding MGP_BALBcJ_T0060633.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38444763 38571995 - MGP_BALBcJ_P0060633 Sclt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060634.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38444763 38571542 - MGP_BALBcJ_P0060634 Sclt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060635.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38444927 38447855 - Sclt1 protein_coding retained_intron MGP_BALBcJ_T0060636.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38447131 38492106 - Sclt1 protein_coding retained_intron MGP_BALBcJ_T0060637.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38474950 38481722 - MGP_BALBcJ_P0060637 Sclt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060638.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38492614 38541089 - Sclt1 protein_coding retained_intron MGP_BALBcJ_T0060639.1 MGP_BALBcJ_G0027159.1 mouse_genomes_project 3 38571032 38571919 - Sclt1 protein_coding retained_intron MGP_BALBcJ_T0062856.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101523107 101535588 + MGP_BALBcJ_P0062856 protein_coding protein_coding MGP_BALBcJ_T0062858.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101523180 101535393 + MGP_BALBcJ_P0062858 protein_coding protein_coding MGP_BALBcJ_T0062859.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101523187 101535588 + MGP_BALBcJ_P0062859 protein_coding protein_coding MGP_BALBcJ_T0062860.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101523215 101535590 + MGP_BALBcJ_P0062860 protein_coding protein_coding MGP_BALBcJ_T0062861.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101523423 101535326 + MGP_BALBcJ_P0062861 protein_coding protein_coding MGP_BALBcJ_T0062862.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101523451 101528462 + protein_coding processed_transcript MGP_BALBcJ_T0062863.1 MGP_BALBcJ_G0027671.1 mouse_genomes_project 3 101528651 101534249 + MGP_BALBcJ_P0062863 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061863.1 MGP_BALBcJ_G0027415.1 mouse_genomes_project 3 86676586 86686837 + MGP_BALBcJ_P0061863 Pmvk protein_coding protein_coding MGP_BALBcJ_T0061864.1 MGP_BALBcJ_G0027415.1 mouse_genomes_project 3 86676625 86686849 + MGP_BALBcJ_P0061864 Pmvk protein_coding protein_coding MGP_BALBcJ_T0061865.1 MGP_BALBcJ_G0027415.1 mouse_genomes_project 3 86676826 86686839 + MGP_BALBcJ_P0061865 Pmvk protein_coding protein_coding MGP_BALBcJ_T0061068.1 MGP_BALBcJ_G0027252.1 mouse_genomes_project 3 64437421 64464583 + MGP_BALBcJ_P0061068 Mlf1 protein_coding protein_coding MGP_BALBcJ_T0061069.1 MGP_BALBcJ_G0027252.1 mouse_genomes_project 3 64437449 64443761 + Mlf1 protein_coding processed_transcript MGP_BALBcJ_T0061070.1 MGP_BALBcJ_G0027252.1 mouse_genomes_project 3 64437466 64459844 + MGP_BALBcJ_P0061070 Mlf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061071.1 MGP_BALBcJ_G0027252.1 mouse_genomes_project 3 64437472 64464588 + MGP_BALBcJ_P0061071 Mlf1 protein_coding protein_coding MGP_BALBcJ_T0062533.1 MGP_BALBcJ_G0027596.1 mouse_genomes_project 3 94206302 94210171 + MGP_BALBcJ_P0062533 Rbm8a protein_coding protein_coding MGP_BALBcJ_T0062534.1 MGP_BALBcJ_G0027596.1 mouse_genomes_project 3 94206309 94210171 + MGP_BALBcJ_P0062534 Rbm8a protein_coding protein_coding MGP_BALBcJ_T0062535.1 MGP_BALBcJ_G0027596.1 mouse_genomes_project 3 94206331 94210171 + MGP_BALBcJ_P0062535 Rbm8a protein_coding protein_coding MGP_BALBcJ_T0062536.1 MGP_BALBcJ_G0027596.1 mouse_genomes_project 3 94206342 94206924 + Rbm8a protein_coding retained_intron MGP_BALBcJ_T0062537.1 MGP_BALBcJ_G0027596.1 mouse_genomes_project 3 94207591 94208271 + Rbm8a protein_coding retained_intron MGP_BALBcJ_T0001171.1 MGP_BALBcJ_G0001096.1 mouse_genomes_project 3 47336115 47340111 - TEC TEC MGP_BALBcJ_T0062989.1 MGP_BALBcJ_G0027701.1 mouse_genomes_project 3 103850914 103868450 + MGP_BALBcJ_P0062989 Chia1 protein_coding protein_coding MGP_BALBcJ_T0062990.1 MGP_BALBcJ_G0027701.1 mouse_genomes_project 3 103851075 103865277 + MGP_BALBcJ_P0062990 Chia1 protein_coding protein_coding MGP_BALBcJ_T0062991.1 MGP_BALBcJ_G0027701.1 mouse_genomes_project 3 103858801 103864893 + Chia1 protein_coding retained_intron MGP_BALBcJ_T0064419.1 MGP_BALBcJ_G0027979.1 mouse_genomes_project 3 153129693 153138883 + Lrriq3 protein_coding retained_intron MGP_BALBcJ_T0064420.1 MGP_BALBcJ_G0027979.1 mouse_genomes_project 3 153129693 153226430 + MGP_BALBcJ_P0064420 Lrriq3 protein_coding protein_coding MGP_BALBcJ_T0064421.1 MGP_BALBcJ_G0027979.1 mouse_genomes_project 3 153129797 153214294 + MGP_BALBcJ_P0064421 Lrriq3 protein_coding protein_coding MGP_BALBcJ_T0064422.1 MGP_BALBcJ_G0027979.1 mouse_genomes_project 3 153129847 153174771 + MGP_BALBcJ_P0064422 Lrriq3 protein_coding protein_coding MGP_BALBcJ_T0014099.1 MGP_BALBcJ_G0012196.1 mouse_genomes_project 3 69708184 69708698 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062891.1 MGP_BALBcJ_G0027677.1 mouse_genomes_project 3 101732072 101934847 - MGP_BALBcJ_P0062891 protein_coding protein_coding MGP_BALBcJ_T0062892.1 MGP_BALBcJ_G0027677.1 mouse_genomes_project 3 101732438 101934576 - MGP_BALBcJ_P0062892 protein_coding protein_coding MGP_BALBcJ_T0062893.1 MGP_BALBcJ_G0027677.1 mouse_genomes_project 3 101735282 101934711 - MGP_BALBcJ_P0062893 protein_coding protein_coding MGP_BALBcJ_T0062894.1 MGP_BALBcJ_G0027677.1 mouse_genomes_project 3 101780374 101782179 - protein_coding retained_intron MGP_BALBcJ_T0061984.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87508733 87524224 + MGP_BALBcJ_P0061984 Dennd4b protein_coding protein_coding MGP_BALBcJ_T0061985.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87510062 87524224 + MGP_BALBcJ_P0061985 Dennd4b protein_coding protein_coding MGP_BALBcJ_T0061986.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87511009 87519197 + MGP_BALBcJ_P0061986 Dennd4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061987.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87512564 87515246 + MGP_BALBcJ_P0061987 Dennd4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061988.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87519014 87521033 + MGP_BALBcJ_P0061988 Dennd4b protein_coding protein_coding MGP_BALBcJ_T0061989.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87520957 87521898 + Dennd4b protein_coding retained_intron MGP_BALBcJ_T0061990.1 MGP_BALBcJ_G0027433.1 mouse_genomes_project 3 87521562 87522225 + Dennd4b protein_coding retained_intron MGP_BALBcJ_T0060164.1 MGP_BALBcJ_G0027077.1 mouse_genomes_project 3 20633569 21637996 - MGP_BALBcJ_P0060164 Naaladl2 protein_coding protein_coding MGP_BALBcJ_T0060165.1 MGP_BALBcJ_G0027077.1 mouse_genomes_project 3 20639802 20775371 - Naaladl2 protein_coding processed_transcript MGP_BALBcJ_T0060166.1 MGP_BALBcJ_G0027077.1 mouse_genomes_project 3 20640452 20806822 - Naaladl2 protein_coding processed_transcript MGP_BALBcJ_T0060167.1 MGP_BALBcJ_G0027077.1 mouse_genomes_project 3 20847264 21048626 - MGP_BALBcJ_P0060167 Naaladl2 protein_coding unknown_likely_coding MGP_BALBcJ_T0060168.1 MGP_BALBcJ_G0027077.1 mouse_genomes_project 3 21404075 21973223 - Naaladl2 protein_coding retained_intron MGP_BALBcJ_T0001296.1 MGP_BALBcJ_G0001219.1 mouse_genomes_project 3 118927198 118927895 - TEC TEC MGP_BALBcJ_T0014120.1 MGP_BALBcJ_G0012217.1 mouse_genomes_project 3 77562014 77562332 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063224.1 MGP_BALBcJ_G0027759.1 mouse_genomes_project 3 106630639 106666138 - MGP_BALBcJ_P0063224 Fndc7 protein_coding protein_coding MGP_BALBcJ_T0063225.1 MGP_BALBcJ_G0027759.1 mouse_genomes_project 3 106630644 106635542 - Fndc7 protein_coding processed_transcript MGP_BALBcJ_T0063226.1 MGP_BALBcJ_G0027759.1 mouse_genomes_project 3 106632267 106666439 - MGP_BALBcJ_P0063226 Fndc7 protein_coding protein_coding MGP_BALBcJ_T0063227.1 MGP_BALBcJ_G0027759.1 mouse_genomes_project 3 106632284 106666247 - MGP_BALBcJ_P0063227 Fndc7 protein_coding protein_coding MGP_BALBcJ_T0063228.1 MGP_BALBcJ_G0027759.1 mouse_genomes_project 3 106633032 106635538 - Fndc7 protein_coding processed_transcript MGP_BALBcJ_T0063229.1 MGP_BALBcJ_G0027759.1 mouse_genomes_project 3 106645442 106658258 - Fndc7 protein_coding retained_intron MGP_BALBcJ_T0062644.1 MGP_BALBcJ_G0027622.1 mouse_genomes_project 3 95892599 95918726 + MGP_BALBcJ_P0062644 Hmgcs2 protein_coding protein_coding MGP_BALBcJ_T0062645.1 MGP_BALBcJ_G0027622.1 mouse_genomes_project 3 95892599 95918732 + MGP_BALBcJ_P0062645 Hmgcs2 protein_coding protein_coding MGP_BALBcJ_T0062746.1 MGP_BALBcJ_G0027653.1 mouse_genomes_project 3 99848838 99857845 - MGP_BALBcJ_P0062746 Vangl1 protein_coding protein_coding MGP_BALBcJ_T0062747.1 MGP_BALBcJ_G0027653.1 mouse_genomes_project 3 99848897 99896565 - MGP_BALBcJ_P0062747 Vangl1 protein_coding protein_coding MGP_BALBcJ_T0062748.1 MGP_BALBcJ_G0027653.1 mouse_genomes_project 3 99853847 99857888 - Vangl1 protein_coding retained_intron MGP_BALBcJ_T0062749.1 MGP_BALBcJ_G0027653.1 mouse_genomes_project 3 99854024 99856856 - Vangl1 protein_coding processed_transcript MGP_BALBcJ_T0062750.1 MGP_BALBcJ_G0027653.1 mouse_genomes_project 3 99876336 99889893 - MGP_BALBcJ_P0062750 Vangl1 protein_coding protein_coding MGP_BALBcJ_T0062751.1 MGP_BALBcJ_G0027653.1 mouse_genomes_project 3 99888810 99895912 - MGP_BALBcJ_P0062751 Vangl1 protein_coding protein_coding MGP_BALBcJ_T0060146.1 MGP_BALBcJ_G0027073.1 mouse_genomes_project 3 17094572 17121813 - MGP_BALBcJ_P0060146 Cpa3 protein_coding protein_coding MGP_BALBcJ_T0060147.1 MGP_BALBcJ_G0027073.1 mouse_genomes_project 3 17107748 17120379 - Cpa3 protein_coding processed_transcript MGP_BALBcJ_T0062765.1 MGP_BALBcJ_G0027657.1 mouse_genomes_project 3 100506547 100641538 - MGP_BALBcJ_P0062765 Sycp1 protein_coding protein_coding MGP_BALBcJ_T0062766.1 MGP_BALBcJ_G0027657.1 mouse_genomes_project 3 100506729 100511123 - Sycp1 protein_coding processed_transcript MGP_BALBcJ_T0062767.1 MGP_BALBcJ_G0027657.1 mouse_genomes_project 3 100506765 100641538 - MGP_BALBcJ_P0062767 Sycp1 protein_coding protein_coding MGP_BALBcJ_T0062768.1 MGP_BALBcJ_G0027657.1 mouse_genomes_project 3 100529483 100641444 - MGP_BALBcJ_P0062768 Sycp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0062769.1 MGP_BALBcJ_G0027657.1 mouse_genomes_project 3 100627543 100641528 - MGP_BALBcJ_P0062769 Sycp1 protein_coding protein_coding MGP_BALBcJ_T0062527.1 MGP_BALBcJ_G0027593.1 mouse_genomes_project 3 94151999 94168319 - MGP_BALBcJ_P0062527 Polr3gl protein_coding protein_coding MGP_BALBcJ_T0062528.1 MGP_BALBcJ_G0027593.1 mouse_genomes_project 3 94152532 94155813 - Polr3gl protein_coding retained_intron MGP_BALBcJ_T0062529.1 MGP_BALBcJ_G0027593.1 mouse_genomes_project 3 94152540 94154294 - Polr3gl protein_coding retained_intron MGP_BALBcJ_T0063335.1 MGP_BALBcJ_G0027782.1 mouse_genomes_project 3 114433061 114443353 + Lrrc39 protein_coding retained_intron MGP_BALBcJ_T0063336.1 MGP_BALBcJ_G0027782.1 mouse_genomes_project 3 114433066 114453356 + MGP_BALBcJ_P0063336 Lrrc39 protein_coding protein_coding MGP_BALBcJ_T0060824.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52152473 52448865 + MGP_BALBcJ_P0060824 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060825.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52152635 52448861 + MGP_BALBcJ_P0060825 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060826.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52152635 52380628 + MGP_BALBcJ_P0060826 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060827.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52157164 52166535 + MGP_BALBcJ_P0060827 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060828.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52157372 52166505 + Dclk1 protein_coding retained_intron MGP_BALBcJ_T0060829.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52263395 52387211 + Dclk1 protein_coding processed_transcript MGP_BALBcJ_T0060830.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52360336 52389844 + Dclk1 protein_coding retained_intron MGP_BALBcJ_T0060831.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371046 52380630 + MGP_BALBcJ_P0060831 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060832.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371076 52448861 + MGP_BALBcJ_P0060832 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060833.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371217 52446349 + MGP_BALBcJ_P0060833 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060834.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371234 52444932 + MGP_BALBcJ_P0060834 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060835.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371234 52446348 + MGP_BALBcJ_P0060835 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060836.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371234 52426997 + MGP_BALBcJ_P0060836 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060837.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52371290 52432079 + MGP_BALBcJ_P0060837 Dclk1 protein_coding protein_coding MGP_BALBcJ_T0060839.1 MGP_BALBcJ_G0027196.1 mouse_genomes_project 3 52437675 52444109 + Dclk1 protein_coding processed_transcript MGP_BALBcJ_T0007541.1 MGP_BALBcJ_G0006171.1 mouse_genomes_project 3 65825033 65827480 - 4930535E02Rik lincRNA lincRNA MGP_BALBcJ_T0063570.1 MGP_BALBcJ_G0027827.1 mouse_genomes_project 3 123743199 123809456 - MGP_BALBcJ_P0063570 Ugt8a protein_coding protein_coding MGP_BALBcJ_T0063571.1 MGP_BALBcJ_G0027827.1 mouse_genomes_project 3 123743434 123786728 - MGP_BALBcJ_P0063571 Ugt8a protein_coding protein_coding MGP_BALBcJ_T0063572.1 MGP_BALBcJ_G0027827.1 mouse_genomes_project 3 123785108 123809388 - Ugt8a protein_coding retained_intron MGP_BALBcJ_T0101079.1 MGP_BALBcJ_G0039115.1 mouse_genomes_project 3 128789428 128789556 - Gm26090 snoRNA snoRNA MGP_BALBcJ_T0061247.1 MGP_BALBcJ_G0027294.1 mouse_genomes_project 3 78210500 78385421 + MGP_BALBcJ_P0061247 Pdgfc protein_coding protein_coding MGP_BALBcJ_T0061248.1 MGP_BALBcJ_G0027294.1 mouse_genomes_project 3 78211256 78385415 + MGP_BALBcJ_P0061248 Pdgfc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061249.1 MGP_BALBcJ_G0027294.1 mouse_genomes_project 3 78211508 78382150 + MGP_BALBcJ_P0061249 Pdgfc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013984.1 MGP_BALBcJ_G0012081.1 mouse_genomes_project 3 36716323 36716603 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014018.1 MGP_BALBcJ_G0012115.1 mouse_genomes_project 3 48454562 48454875 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099728.1 MGP_BALBcJ_G0037764.1 mouse_genomes_project 3 37812071 37812229 + Gm22043 snRNA snRNA MGP_BALBcJ_T0060465.1 MGP_BALBcJ_G0027129.1 mouse_genomes_project 3 33080623 33135016 - MGP_BALBcJ_P0060465 Qrfpr protein_coding protein_coding MGP_BALBcJ_T0060466.1 MGP_BALBcJ_G0027129.1 mouse_genomes_project 3 33088999 33134957 - Qrfpr protein_coding retained_intron MGP_BALBcJ_T0101025.1 MGP_BALBcJ_G0039061.1 mouse_genomes_project 3 30757456 30757588 - Gm23175 snoRNA snoRNA MGP_BALBcJ_T0007750.1 MGP_BALBcJ_G0006334.1 mouse_genomes_project 3 149346647 149350923 + Gm42949 lincRNA lincRNA MGP_BALBcJ_T0060029.1 MGP_BALBcJ_G0027044.1 mouse_genomes_project 3 10601373 10951416 + MGP_BALBcJ_P0060029 Ralyl protein_coding unknown_likely_coding MGP_BALBcJ_T0060030.1 MGP_BALBcJ_G0027044.1 mouse_genomes_project 3 10779241 11024458 + MGP_BALBcJ_P0060030 Ralyl protein_coding protein_coding MGP_BALBcJ_T0060031.1 MGP_BALBcJ_G0027044.1 mouse_genomes_project 3 10779252 11025314 + MGP_BALBcJ_P0060031 Ralyl protein_coding protein_coding MGP_BALBcJ_T0060032.1 MGP_BALBcJ_G0027044.1 mouse_genomes_project 3 10779259 11025621 + MGP_BALBcJ_P0060032 Ralyl protein_coding protein_coding MGP_BALBcJ_T0060675.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48116446 48206743 - MGP_BALBcJ_P0060675 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060676.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48118956 48191349 - MGP_BALBcJ_P0060676 Elf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060677.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48118957 48206724 - MGP_BALBcJ_P0060677 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060678.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48119389 48141050 - MGP_BALBcJ_P0060678 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060679.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48119391 48141149 - MGP_BALBcJ_P0060679 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060680.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48119391 48141210 - MGP_BALBcJ_P0060680 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060681.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48119411 48191307 - MGP_BALBcJ_P0060681 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060682.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48122411 48123968 - Elf2 protein_coding retained_intron MGP_BALBcJ_T0060683.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48128600 48141003 - MGP_BALBcJ_P0060683 Elf2 protein_coding protein_coding MGP_BALBcJ_T0060684.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48128600 48206738 - MGP_BALBcJ_P0060684 Elf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060685.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48128616 48206641 - Elf2 protein_coding processed_transcript MGP_BALBcJ_T0060686.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48128616 48141059 - MGP_BALBcJ_P0060686 Elf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060687.1 MGP_BALBcJ_G0027166.1 mouse_genomes_project 3 48128780 48141079 - MGP_BALBcJ_P0060687 Elf2 protein_coding protein_coding MGP_BALBcJ_T0014309.1 MGP_BALBcJ_G0012406.1 mouse_genomes_project 3 133363729 133364058 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014225.1 MGP_BALBcJ_G0012322.1 mouse_genomes_project 3 105770173 105770617 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004203.1 MGP_BALBcJ_G0003702.1 mouse_genomes_project 3 30623682 30624373 + Gm43140 antisense antisense MGP_BALBcJ_T0014199.1 MGP_BALBcJ_G0012296.1 mouse_genomes_project 3 98990657 98991087 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060267.1 MGP_BALBcJ_G0027094.1 mouse_genomes_project 3 27425940 27443677 + MGP_BALBcJ_P0060267 Mynn protein_coding protein_coding MGP_BALBcJ_T0060268.1 MGP_BALBcJ_G0027094.1 mouse_genomes_project 3 27426506 27443677 + MGP_BALBcJ_P0060268 Mynn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060269.1 MGP_BALBcJ_G0027094.1 mouse_genomes_project 3 27426512 27442172 + MGP_BALBcJ_P0060269 Mynn protein_coding protein_coding MGP_BALBcJ_T0060270.1 MGP_BALBcJ_G0027094.1 mouse_genomes_project 3 27426514 27428036 + Mynn protein_coding retained_intron MGP_BALBcJ_T0060271.1 MGP_BALBcJ_G0027094.1 mouse_genomes_project 3 27426519 27442305 + MGP_BALBcJ_P0060271 Mynn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060272.1 MGP_BALBcJ_G0027094.1 mouse_genomes_project 3 27437381 27440599 + Mynn protein_coding retained_intron MGP_BALBcJ_T0061172.1 MGP_BALBcJ_G0027280.1 mouse_genomes_project 3 72689873 72776812 + MGP_BALBcJ_P0061172 Serpini1 protein_coding protein_coding MGP_BALBcJ_T0061173.1 MGP_BALBcJ_G0027280.1 mouse_genomes_project 3 72689873 72749470 + MGP_BALBcJ_P0061173 Serpini1 protein_coding protein_coding MGP_BALBcJ_T0061174.1 MGP_BALBcJ_G0027280.1 mouse_genomes_project 3 72689887 72744453 + Serpini1 protein_coding processed_transcript MGP_BALBcJ_T0061175.1 MGP_BALBcJ_G0027280.1 mouse_genomes_project 3 72689904 72748962 + Serpini1 protein_coding retained_intron MGP_BALBcJ_T0004382.1 MGP_BALBcJ_G0003823.1 mouse_genomes_project 3 144597189 144606973 + Gm16325 antisense antisense MGP_BALBcJ_T0004383.1 MGP_BALBcJ_G0003823.1 mouse_genomes_project 3 144603866 144604770 + Gm16325 antisense antisense MGP_BALBcJ_T0061655.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978487 85989355 + MGP_BALBcJ_P0061655 Rit1 protein_coding protein_coding MGP_BALBcJ_T0061656.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978490 85994044 + MGP_BALBcJ_P0061656 Rit1 protein_coding protein_coding MGP_BALBcJ_T0061657.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978492 85979619 + Rit1 protein_coding retained_intron MGP_BALBcJ_T0061658.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978505 85994030 + MGP_BALBcJ_P0061658 Rit1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061659.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978509 85994038 + Rit1 protein_coding retained_intron MGP_BALBcJ_T0061660.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978510 85992539 + MGP_BALBcJ_P0061660 Rit1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061661.1 MGP_BALBcJ_G0027380.1 mouse_genomes_project 3 85978522 85989305 + Rit1 protein_coding retained_intron MGP_BALBcJ_T0014114.1 MGP_BALBcJ_G0012211.1 mouse_genomes_project 3 75308731 75309665 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062942.1 MGP_BALBcJ_G0027688.1 mouse_genomes_project 3 102795240 102807204 + MGP_BALBcJ_P0062942 4930564D02Rik protein_coding protein_coding MGP_BALBcJ_T0001222.1 MGP_BALBcJ_G0001145.1 mouse_genomes_project 3 56138035 56139570 + TEC TEC MGP_BALBcJ_T0001187.1 MGP_BALBcJ_G0001112.1 mouse_genomes_project 3 48569580 48571313 + TEC TEC MGP_BALBcJ_T0001188.1 MGP_BALBcJ_G0001112.1 mouse_genomes_project 3 48569635 48571313 + TEC TEC MGP_BALBcJ_T0010517.1 MGP_BALBcJ_G0008642.1 mouse_genomes_project 3 90765101 90765210 - Gm22752 miRNA miRNA MGP_BALBcJ_T0007418.1 MGP_BALBcJ_G0006081.1 mouse_genomes_project 3 2358163 2360502 - 4930555M17Rik lincRNA lincRNA MGP_BALBcJ_T0014228.1 MGP_BALBcJ_G0012325.1 mouse_genomes_project 3 106371516 106371941 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017910.1 MGP_BALBcJ_G0015440.1 mouse_genomes_project 3 34210628 34299644 + Gm43439 processed_transcript processed_transcript MGP_BALBcJ_T0098919.1 MGP_BALBcJ_G0036966.1 mouse_genomes_project 3 102188975 102195039 - Gm43696 sense_intronic sense_intronic MGP_BALBcJ_T0064387.1 MGP_BALBcJ_G0027973.1 mouse_genomes_project 3 152343241 152367362 - MGP_BALBcJ_P0064387 Lhx8 protein_coding protein_coding MGP_BALBcJ_T0064388.1 MGP_BALBcJ_G0027973.1 mouse_genomes_project 3 152343243 152366761 - MGP_BALBcJ_P0064388 Lhx8 protein_coding protein_coding MGP_BALBcJ_T0064389.1 MGP_BALBcJ_G0027973.1 mouse_genomes_project 3 152343925 152364868 - MGP_BALBcJ_P0064389 Lhx8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064390.1 MGP_BALBcJ_G0027973.1 mouse_genomes_project 3 152353428 152361579 - Lhx8 protein_coding retained_intron MGP_BALBcJ_T0064391.1 MGP_BALBcJ_G0027973.1 mouse_genomes_project 3 152358952 152365336 - MGP_BALBcJ_P0064391 Lhx8 protein_coding protein_coding MGP_BALBcJ_T0001350.1 MGP_BALBcJ_G0001272.1 mouse_genomes_project 3 129451383 129454723 - TEC TEC MGP_BALBcJ_T0062715.1 MGP_BALBcJ_G0027644.1 mouse_genomes_project 3 98675365 98711570 - MGP_BALBcJ_P0062715 Cd101 protein_coding protein_coding MGP_BALBcJ_T0062716.1 MGP_BALBcJ_G0027644.1 mouse_genomes_project 3 98675368 98704212 - MGP_BALBcJ_P0062716 Cd101 protein_coding protein_coding MGP_BALBcJ_T0014242.1 MGP_BALBcJ_G0012339.1 mouse_genomes_project 3 110863268 110865528 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014362.1 MGP_BALBcJ_G0012459.1 mouse_genomes_project 3 154312975 154313441 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063011.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281268 104312128 + MGP_BALBcJ_P0063011 Dram2 protein_coding protein_coding MGP_BALBcJ_T0063012.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281297 104302204 + Dram2 protein_coding retained_intron MGP_BALBcJ_T0063013.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281301 104288749 + MGP_BALBcJ_P0063013 Dram2 protein_coding protein_coding MGP_BALBcJ_T0063014.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281334 104311180 + MGP_BALBcJ_P0063014 Dram2 protein_coding protein_coding MGP_BALBcJ_T0063015.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281340 104302045 + Dram2 protein_coding retained_intron MGP_BALBcJ_T0063016.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281342 104311180 + MGP_BALBcJ_P0063016 Dram2 protein_coding protein_coding MGP_BALBcJ_T0063017.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281347 104288717 + MGP_BALBcJ_P0063017 Dram2 protein_coding protein_coding MGP_BALBcJ_T0063018.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281347 104307220 + MGP_BALBcJ_P0063018 Dram2 protein_coding protein_coding MGP_BALBcJ_T0063019.1 MGP_BALBcJ_G0027707.1 mouse_genomes_project 3 104281351 104307157 + MGP_BALBcJ_P0063019 Dram2 protein_coding protein_coding MGP_BALBcJ_T0061283.1 MGP_BALBcJ_G0027304.1 mouse_genomes_project 3 80192922 80200143 + MGP_BALBcJ_P0061283 Fgg protein_coding protein_coding MGP_BALBcJ_T0061284.1 MGP_BALBcJ_G0027304.1 mouse_genomes_project 3 80193059 80199834 + MGP_BALBcJ_P0061284 Fgg protein_coding protein_coding MGP_BALBcJ_T0060863.1 MGP_BALBcJ_G0027204.1 mouse_genomes_project 3 54533314 54564043 - MGP_BALBcJ_P0060863 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060864.1 MGP_BALBcJ_G0027204.1 mouse_genomes_project 3 54533358 54563590 - MGP_BALBcJ_P0060864 protein_coding unknown_likely_coding MGP_BALBcJ_T0060865.1 MGP_BALBcJ_G0027204.1 mouse_genomes_project 3 54540523 54563779 - MGP_BALBcJ_P0060865 protein_coding protein_coding MGP_BALBcJ_T0060866.1 MGP_BALBcJ_G0027204.1 mouse_genomes_project 3 54542367 54563781 - MGP_BALBcJ_P0060866 protein_coding protein_coding MGP_BALBcJ_T0060462.1 MGP_BALBcJ_G0027128.1 mouse_genomes_project 3 33051804 33071139 + MGP_BALBcJ_P0060462 D3Ertd254e protein_coding protein_coding MGP_BALBcJ_T0060463.1 MGP_BALBcJ_G0027128.1 mouse_genomes_project 3 33051949 33063471 + MGP_BALBcJ_P0060463 D3Ertd254e protein_coding protein_coding MGP_BALBcJ_T0060464.1 MGP_BALBcJ_G0027128.1 mouse_genomes_project 3 33060318 33071132 + MGP_BALBcJ_P0060464 D3Ertd254e protein_coding protein_coding MGP_BALBcJ_T0060567.1 MGP_BALBcJ_G0027149.1 mouse_genomes_project 3 37400424 37424376 + MGP_BALBcJ_P0060567 Intu protein_coding protein_coding MGP_BALBcJ_T0060568.1 MGP_BALBcJ_G0027149.1 mouse_genomes_project 3 37409904 37475146 + MGP_BALBcJ_P0060568 Intu protein_coding protein_coding MGP_BALBcJ_T0060569.1 MGP_BALBcJ_G0027149.1 mouse_genomes_project 3 37443253 37463099 + MGP_BALBcJ_P0060569 Intu protein_coding protein_coding MGP_BALBcJ_T0062646.1 MGP_BALBcJ_G0027623.1 mouse_genomes_project 3 95921125 95948315 - MGP_BALBcJ_P0062646 protein_coding protein_coding MGP_BALBcJ_T0062647.1 MGP_BALBcJ_G0027623.1 mouse_genomes_project 3 95929168 95941935 - protein_coding retained_intron MGP_BALBcJ_T0062648.1 MGP_BALBcJ_G0027623.1 mouse_genomes_project 3 95929708 95936554 - protein_coding retained_intron MGP_BALBcJ_T0062649.1 MGP_BALBcJ_G0027623.1 mouse_genomes_project 3 95929815 95945870 - MGP_BALBcJ_P0062649 protein_coding protein_coding MGP_BALBcJ_T0061336.1 MGP_BALBcJ_G0027317.1 mouse_genomes_project 3 81676766 83089953 - MGP_BALBcJ_P0061336 protein_coding protein_coding MGP_BALBcJ_T0061359.1 MGP_BALBcJ_G0027317.1 mouse_genomes_project 3 83000158 83089955 - protein_coding processed_transcript MGP_BALBcJ_T0061360.1 MGP_BALBcJ_G0027317.1 mouse_genomes_project 3 83016225 83089805 - protein_coding retained_intron MGP_BALBcJ_T0004353.1 MGP_BALBcJ_G0003802.1 mouse_genomes_project 3 127438541 127443450 - Gm35986 antisense antisense MGP_BALBcJ_T0004354.1 MGP_BALBcJ_G0003802.1 mouse_genomes_project 3 127438706 127443729 - Gm35986 antisense antisense MGP_BALBcJ_T0001180.1 MGP_BALBcJ_G0001105.1 mouse_genomes_project 3 48167309 48167725 - TEC TEC MGP_BALBcJ_T0010495.1 MGP_BALBcJ_G0008620.1 mouse_genomes_project 3 43779126 43779241 - Mir6379 miRNA miRNA MGP_BALBcJ_T0014045.1 MGP_BALBcJ_G0012142.1 mouse_genomes_project 3 56326380 56330735 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011518.1 MGP_BALBcJ_G0009643.1 mouse_genomes_project 3 55863533 55863609 + Gm27793 misc_RNA misc_RNA MGP_BALBcJ_T0063033.1 MGP_BALBcJ_G0027710.1 mouse_genomes_project 3 104558147 104559174 - MGP_BALBcJ_P0063033 Olfr266 protein_coding protein_coding MGP_BALBcJ_T0017970.1 MGP_BALBcJ_G0015463.1 mouse_genomes_project 3 121412423 121413277 - Snhg8 processed_transcript lincRNA MGP_BALBcJ_T0017971.1 MGP_BALBcJ_G0015463.1 mouse_genomes_project 3 121412426 121413203 - Snhg8 processed_transcript retained_intron MGP_BALBcJ_T0017972.1 MGP_BALBcJ_G0015463.1 mouse_genomes_project 3 121412428 121413206 - Snhg8 processed_transcript lincRNA MGP_BALBcJ_T0101058.1 MGP_BALBcJ_G0039094.1 mouse_genomes_project 3 92598991 92599076 - Gm24920 snoRNA snoRNA MGP_BALBcJ_T0060174.1 MGP_BALBcJ_G0027079.1 mouse_genomes_project 3 23459110 23791454 + MGP_BALBcJ_P0060174 Spata16 protein_coding protein_coding MGP_BALBcJ_T0060175.1 MGP_BALBcJ_G0027079.1 mouse_genomes_project 3 23460869 23743994 + MGP_BALBcJ_P0060175 Spata16 protein_coding protein_coding MGP_BALBcJ_T0062073.1 MGP_BALBcJ_G0027460.1 mouse_genomes_project 3 89451360 89459123 - MGP_BALBcJ_P0062073 Lelp1 protein_coding protein_coding MGP_BALBcJ_T0014036.1 MGP_BALBcJ_G0012133.1 mouse_genomes_project 3 54635763 54636555 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013964.1 MGP_BALBcJ_G0012061.1 mouse_genomes_project 3 33298743 33299242 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013998.1 MGP_BALBcJ_G0012095.1 mouse_genomes_project 3 42541061 42541422 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062093.1 MGP_BALBcJ_G0027477.1 mouse_genomes_project 3 89906003 89908776 - MGP_BALBcJ_P0062093 Ivl protein_coding protein_coding MGP_BALBcJ_T0063564.1 MGP_BALBcJ_G0027826.1 mouse_genomes_project 3 123257798 123589340 + MGP_BALBcJ_P0063564 Ndst4 protein_coding protein_coding MGP_BALBcJ_T0063565.1 MGP_BALBcJ_G0027826.1 mouse_genomes_project 3 123257812 123546697 + Ndst4 protein_coding retained_intron MGP_BALBcJ_T0063566.1 MGP_BALBcJ_G0027826.1 mouse_genomes_project 3 123423624 123468989 + MGP_BALBcJ_P0063566 Ndst4 protein_coding protein_coding MGP_BALBcJ_T0063567.1 MGP_BALBcJ_G0027826.1 mouse_genomes_project 3 123541016 123588780 + MGP_BALBcJ_P0063567 Ndst4 protein_coding protein_coding MGP_BALBcJ_T0063568.1 MGP_BALBcJ_G0027826.1 mouse_genomes_project 3 123541026 123551012 + Ndst4 protein_coding processed_transcript MGP_BALBcJ_T0063569.1 MGP_BALBcJ_G0027826.1 mouse_genomes_project 3 123570633 123585152 + MGP_BALBcJ_P0063569 Ndst4 protein_coding protein_coding MGP_BALBcJ_T0004288.1 MGP_BALBcJ_G0003762.1 mouse_genomes_project 3 93809615 93824487 - antisense antisense MGP_BALBcJ_T0014210.1 MGP_BALBcJ_G0012307.1 mouse_genomes_project 3 101618971 101619436 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004337.1 MGP_BALBcJ_G0003790.1 mouse_genomes_project 3 114502474 114503013 + Gm42457 antisense antisense MGP_BALBcJ_T0099760.1 MGP_BALBcJ_G0037796.1 mouse_genomes_project 3 86306574 86306678 - Gm22935 snRNA snRNA MGP_BALBcJ_T0064136.1 MGP_BALBcJ_G0027934.1 mouse_genomes_project 3 143871978 143874346 + Bcl10 protein_coding retained_intron MGP_BALBcJ_T0064137.1 MGP_BALBcJ_G0027934.1 mouse_genomes_project 3 143873436 143883515 + MGP_BALBcJ_P0064137 Bcl10 protein_coding protein_coding MGP_BALBcJ_T0064138.1 MGP_BALBcJ_G0027934.1 mouse_genomes_project 3 143873531 143877106 + Bcl10 protein_coding processed_transcript MGP_BALBcJ_T0060331.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29344407 29354982 + MGP_BALBcJ_P0060331 Zfp639 protein_coding protein_coding MGP_BALBcJ_T0060332.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29344683 29354892 + MGP_BALBcJ_P0060332 Zfp639 protein_coding protein_coding MGP_BALBcJ_T0060333.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29344812 29353715 + MGP_BALBcJ_P0060333 Zfp639 protein_coding protein_coding MGP_BALBcJ_T0060334.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29345044 29347324 + Zfp639 protein_coding processed_transcript MGP_BALBcJ_T0060335.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29346326 29353778 + Zfp639 protein_coding retained_intron MGP_BALBcJ_T0060336.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29347148 29353717 + MGP_BALBcJ_P0060336 Zfp639 protein_coding protein_coding MGP_BALBcJ_T0060337.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29349443 29354834 + MGP_BALBcJ_P0060337 Zfp639 protein_coding protein_coding MGP_BALBcJ_T0060338.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29351228 29354666 + MGP_BALBcJ_P0060338 Zfp639 protein_coding protein_coding MGP_BALBcJ_T0060339.1 MGP_BALBcJ_G0027110.1 mouse_genomes_project 3 29352947 29353709 + Zfp639 protein_coding retained_intron MGP_BALBcJ_T0060142.1 MGP_BALBcJ_G0027072.1 mouse_genomes_project 3 17004185 17037492 - MGP_BALBcJ_P0060142 Gyg protein_coding protein_coding MGP_BALBcJ_T0060143.1 MGP_BALBcJ_G0027072.1 mouse_genomes_project 3 17004188 17037271 - MGP_BALBcJ_P0060143 Gyg protein_coding protein_coding MGP_BALBcJ_T0060144.1 MGP_BALBcJ_G0027072.1 mouse_genomes_project 3 17004248 17037244 - MGP_BALBcJ_P0060144 Gyg protein_coding protein_coding MGP_BALBcJ_T0060145.1 MGP_BALBcJ_G0027072.1 mouse_genomes_project 3 17004657 17005645 - Gyg protein_coding retained_intron MGP_BALBcJ_T0007553.1 MGP_BALBcJ_G0006181.1 mouse_genomes_project 3 73088574 73133696 + Gm37256 lincRNA lincRNA MGP_BALBcJ_T0004351.1 MGP_BALBcJ_G0003800.1 mouse_genomes_project 3 125460389 125461722 - Gm43729 antisense antisense MGP_BALBcJ_T0004313.1 MGP_BALBcJ_G0003779.1 mouse_genomes_project 3 104659272 104818654 - Gm27008 antisense antisense MGP_BALBcJ_T0004314.1 MGP_BALBcJ_G0003779.1 mouse_genomes_project 3 104675124 104821113 - Gm27008 antisense antisense MGP_BALBcJ_T0062391.1 MGP_BALBcJ_G0027560.1 mouse_genomes_project 3 93154622 93155620 + Ensa protein_coding TEC MGP_BALBcJ_T0062392.1 MGP_BALBcJ_G0027560.1 mouse_genomes_project 3 93154640 93161732 + MGP_BALBcJ_P0062392 Ensa protein_coding protein_coding MGP_BALBcJ_T0062393.1 MGP_BALBcJ_G0027560.1 mouse_genomes_project 3 93154649 93161732 + MGP_BALBcJ_P0062393 Ensa protein_coding protein_coding MGP_BALBcJ_T0062394.1 MGP_BALBcJ_G0027560.1 mouse_genomes_project 3 93154655 93157164 + Ensa protein_coding retained_intron MGP_BALBcJ_T0001379.1 MGP_BALBcJ_G0001301.1 mouse_genomes_project 3 150413753 150416808 - TEC TEC MGP_BALBcJ_T0014053.1 MGP_BALBcJ_G0012150.1 mouse_genomes_project 3 57802626 57803005 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098918.1 MGP_BALBcJ_G0036965.1 mouse_genomes_project 3 101904779 101907874 - Gm43256 sense_intronic sense_intronic MGP_BALBcJ_T0014208.1 MGP_BALBcJ_G0012305.1 mouse_genomes_project 3 100949707 100949996 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062519.1 MGP_BALBcJ_G0027590.1 mouse_genomes_project 3 94097324 94101368 + MGP_BALBcJ_P0062519 Hfe2 protein_coding protein_coding MGP_BALBcJ_T0062186.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91894936 91974055 - MGP_BALBcJ_P0062186 Snx27 protein_coding protein_coding MGP_BALBcJ_T0062187.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91896704 91973888 - MGP_BALBcJ_P0062187 Snx27 protein_coding protein_coding MGP_BALBcJ_T0062188.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91898433 91921636 - Snx27 protein_coding processed_transcript MGP_BALBcJ_T0062189.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91898519 91974018 - MGP_BALBcJ_P0062189 Snx27 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062190.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91898529 91916445 - Snx27 protein_coding processed_transcript MGP_BALBcJ_T0062191.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91899448 91953482 - MGP_BALBcJ_P0062191 Snx27 protein_coding protein_coding MGP_BALBcJ_T0062192.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91916463 91953245 - MGP_BALBcJ_P0062192 Snx27 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062193.1 MGP_BALBcJ_G0027524.1 mouse_genomes_project 3 91928548 91929197 - Snx27 protein_coding processed_transcript MGP_BALBcJ_T0062075.1 MGP_BALBcJ_G0027462.1 mouse_genomes_project 3 89530496 89618886 + MGP_BALBcJ_P0062075 protein_coding protein_coding MGP_BALBcJ_T0062077.1 MGP_BALBcJ_G0027462.1 mouse_genomes_project 3 89599265 89616726 + MGP_BALBcJ_P0062077 protein_coding protein_coding MGP_BALBcJ_T0001140.1 MGP_BALBcJ_G0001065.1 mouse_genomes_project 3 31492617 31492731 + TEC TEC MGP_BALBcJ_T0001213.1 MGP_BALBcJ_G0001136.1 mouse_genomes_project 3 52924976 52926948 - TEC TEC MGP_BALBcJ_T0063189.1 MGP_BALBcJ_G0027753.1 mouse_genomes_project 3 106337923 106347588 + Taf13 protein_coding processed_transcript MGP_BALBcJ_T0063190.1 MGP_BALBcJ_G0027753.1 mouse_genomes_project 3 106337924 106348398 + Taf13 protein_coding processed_transcript MGP_BALBcJ_T0063191.1 MGP_BALBcJ_G0027753.1 mouse_genomes_project 3 106337924 106349551 + MGP_BALBcJ_P0063191 Taf13 protein_coding protein_coding MGP_BALBcJ_T0063192.1 MGP_BALBcJ_G0027753.1 mouse_genomes_project 3 106337936 106339530 + Taf13 protein_coding retained_intron MGP_BALBcJ_T0062842.1 MGP_BALBcJ_G0027668.1 mouse_genomes_project 3 101451779 101458790 + MGP_BALBcJ_P0062842 Gm10964 protein_coding protein_coding MGP_BALBcJ_T0001196.1 MGP_BALBcJ_G0001119.1 mouse_genomes_project 3 48865330 48867547 - TEC TEC MGP_BALBcJ_T0013975.1 MGP_BALBcJ_G0012072.1 mouse_genomes_project 3 34500560 34501209 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007753.1 MGP_BALBcJ_G0006337.1 mouse_genomes_project 3 151172143 151192191 - Gm43832 lincRNA lincRNA MGP_BALBcJ_T0007754.1 MGP_BALBcJ_G0006337.1 mouse_genomes_project 3 151175655 151184796 - Gm43832 lincRNA lincRNA MGP_BALBcJ_T0063237.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106715549 106716122 + Henmt1 protein_coding processed_transcript MGP_BALBcJ_T0063239.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106715736 106718410 + MGP_BALBcJ_P0063239 Henmt1 protein_coding protein_coding MGP_BALBcJ_T0063240.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106715761 106733064 + MGP_BALBcJ_P0063240 Henmt1 protein_coding protein_coding MGP_BALBcJ_T0063241.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106715791 106731709 + MGP_BALBcJ_P0063241 Henmt1 protein_coding protein_coding MGP_BALBcJ_T0063242.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106716176 106733162 + MGP_BALBcJ_P0063242 Henmt1 protein_coding protein_coding MGP_BALBcJ_T0063243.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106716987 106732603 + MGP_BALBcJ_P0063243 Henmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063244.1 MGP_BALBcJ_G0027761.1 mouse_genomes_project 3 106716987 106733076 + MGP_BALBcJ_P0063244 Henmt1 protein_coding protein_coding MGP_BALBcJ_T0010548.1 MGP_BALBcJ_G0008673.1 mouse_genomes_project 3 149035563 149035634 - Mir3963 miRNA miRNA MGP_BALBcJ_T0004307.1 MGP_BALBcJ_G0003774.1 mouse_genomes_project 3 101681585 101685624 - Phtf1os antisense antisense MGP_BALBcJ_T0063034.1 MGP_BALBcJ_G0027711.1 mouse_genomes_project 3 104762980 104764882 + MGP_BALBcJ_P0063034 Kcna3 protein_coding protein_coding MGP_BALBcJ_T0017911.1 MGP_BALBcJ_G0015441.1 mouse_genomes_project 3 42102064 42206662 - processed_transcript lincRNA MGP_BALBcJ_T0017912.1 MGP_BALBcJ_G0015441.1 mouse_genomes_project 3 42102977 42193083 - processed_transcript lincRNA MGP_BALBcJ_T0017913.1 MGP_BALBcJ_G0015441.1 mouse_genomes_project 3 42153819 42206607 - processed_transcript retained_intron MGP_BALBcJ_T0013915.1 MGP_BALBcJ_G0012012.1 mouse_genomes_project 3 12964760 12964935 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007569.1 MGP_BALBcJ_G0006194.1 mouse_genomes_project 3 80730502 80750800 - 1700028M03Rik lincRNA lincRNA MGP_BALBcJ_T0060328.1 MGP_BALBcJ_G0027108.1 mouse_genomes_project 3 29232367 29301801 + MGP_BALBcJ_P0060328 Pik3ca protein_coding protein_coding MGP_BALBcJ_T0060329.1 MGP_BALBcJ_G0027108.1 mouse_genomes_project 3 29296691 29297843 + Pik3ca protein_coding retained_intron MGP_BALBcJ_T0014059.1 MGP_BALBcJ_G0012156.1 mouse_genomes_project 3 60098038 60098794 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101067.1 MGP_BALBcJ_G0039103.1 mouse_genomes_project 3 106203303 106203427 + Gm22942 snoRNA snoRNA MGP_BALBcJ_T0001179.1 MGP_BALBcJ_G0001104.1 mouse_genomes_project 3 48140393 48142018 + TEC TEC MGP_BALBcJ_T0101698.1 MGP_BALBcJ_G0039679.1 mouse_genomes_project 3 140751326 140751845 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0099765.1 MGP_BALBcJ_G0037801.1 mouse_genomes_project 3 87813289 87813436 - Gm23464 snRNA snRNA MGP_BALBcJ_T0062094.1 MGP_BALBcJ_G0027478.1 mouse_genomes_project 3 89922671 89924999 - MGP_BALBcJ_P0062094 Smcp protein_coding protein_coding MGP_BALBcJ_T0062095.1 MGP_BALBcJ_G0027478.1 mouse_genomes_project 3 89922671 89927782 - MGP_BALBcJ_P0062095 Smcp protein_coding protein_coding MGP_BALBcJ_T0014052.1 MGP_BALBcJ_G0012149.1 mouse_genomes_project 3 57701200 57701770 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014272.1 MGP_BALBcJ_G0012369.1 mouse_genomes_project 3 120777506 120777966 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007514.1 MGP_BALBcJ_G0006150.1 mouse_genomes_project 3 49015497 49106701 - Gm37202 lincRNA lincRNA MGP_BALBcJ_T0001205.1 MGP_BALBcJ_G0001128.1 mouse_genomes_project 3 50021898 50022354 + TEC TEC MGP_BALBcJ_T0007642.1 MGP_BALBcJ_G0006249.1 mouse_genomes_project 3 114065388 114067694 + Gm43202 lincRNA lincRNA MGP_BALBcJ_T0062030.1 MGP_BALBcJ_G0027441.1 mouse_genomes_project 3 87758948 87762310 - MGP_BALBcJ_P0062030 S100a1 protein_coding protein_coding MGP_BALBcJ_T0062031.1 MGP_BALBcJ_G0027441.1 mouse_genomes_project 3 87758951 87762196 - MGP_BALBcJ_P0062031 S100a1 protein_coding protein_coding MGP_BALBcJ_T0061008.1 MGP_BALBcJ_G0027238.1 mouse_genomes_project 3 60913666 60956224 + MGP_BALBcJ_P0061008 Gmps protein_coding protein_coding MGP_BALBcJ_T0062104.1 MGP_BALBcJ_G0027486.1 mouse_genomes_project 3 90038497 90040606 - MGP_BALBcJ_P0062104 Lce1e protein_coding protein_coding MGP_BALBcJ_T0001148.1 MGP_BALBcJ_G0001073.1 mouse_genomes_project 3 34539985 34542063 - TEC TEC MGP_BALBcJ_T0001363.1 MGP_BALBcJ_G0001285.1 mouse_genomes_project 3 135752893 135755235 + TEC TEC MGP_BALBcJ_T0060232.1 MGP_BALBcJ_G0027089.1 mouse_genomes_project 3 25605573 25623144 + MGP_BALBcJ_P0060232 Eif5a2 protein_coding protein_coding MGP_BALBcJ_T0062068.1 MGP_BALBcJ_G0027455.1 mouse_genomes_project 3 88180826 88182757 - MGP_BALBcJ_P0062068 Gm5849 protein_coding protein_coding MGP_BALBcJ_T0007590.1 MGP_BALBcJ_G0006204.1 mouse_genomes_project 3 87229676 87232238 + Gm19710 lincRNA lincRNA MGP_BALBcJ_T0007591.1 MGP_BALBcJ_G0006204.1 mouse_genomes_project 3 87232027 87252339 + Gm19710 lincRNA lincRNA MGP_BALBcJ_T0001295.1 MGP_BALBcJ_G0001218.1 mouse_genomes_project 3 117632973 117635212 - TEC TEC MGP_BALBcJ_T0060886.1 MGP_BALBcJ_G0027208.1 mouse_genomes_project 3 55388220 55394302 - MGP_BALBcJ_P0060886 Serp1 protein_coding protein_coding MGP_BALBcJ_T0098885.1 MGP_BALBcJ_G0036932.1 mouse_genomes_project 3 91967129 91968384 - Gm43768 sense_intronic sense_intronic MGP_BALBcJ_T0011533.1 MGP_BALBcJ_G0009658.1 mouse_genomes_project 3 153128272 153128383 + Gm26456 misc_RNA misc_RNA MGP_BALBcJ_T0007679.1 MGP_BALBcJ_G0006277.1 mouse_genomes_project 3 129599513 129861649 + lincRNA lincRNA MGP_BALBcJ_T0063376.1 MGP_BALBcJ_G0027789.1 mouse_genomes_project 3 114737319 114790609 + MGP_BALBcJ_P0063376 Frrs1 protein_coding protein_coding MGP_BALBcJ_T0063377.1 MGP_BALBcJ_G0027789.1 mouse_genomes_project 3 114737422 114776350 + MGP_BALBcJ_P0063377 Frrs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063378.1 MGP_BALBcJ_G0027789.1 mouse_genomes_project 3 114764250 114795231 + MGP_BALBcJ_P0063378 Frrs1 protein_coding protein_coding MGP_BALBcJ_T0063379.1 MGP_BALBcJ_G0027789.1 mouse_genomes_project 3 114776270 114782063 + Frrs1 protein_coding retained_intron MGP_BALBcJ_T0063380.1 MGP_BALBcJ_G0027789.1 mouse_genomes_project 3 114777020 114785441 + Frrs1 protein_coding retained_intron MGP_BALBcJ_T0063381.1 MGP_BALBcJ_G0027789.1 mouse_genomes_project 3 114782051 114789572 + MGP_BALBcJ_P0063381 Frrs1 protein_coding protein_coding MGP_BALBcJ_T0001225.1 MGP_BALBcJ_G0001148.1 mouse_genomes_project 3 57526148 57529513 + TEC TEC MGP_BALBcJ_T0007440.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14667564 14677685 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0007441.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14667600 14677170 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0007442.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14671558 14673041 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0007443.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14671566 14677226 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0007444.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14671583 14677139 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0007445.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14672531 14686478 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0007446.1 MGP_BALBcJ_G0006096.1 mouse_genomes_project 3 14673379 14677226 + Mir124-2hg lincRNA lincRNA MGP_BALBcJ_T0001182.1 MGP_BALBcJ_G0001107.1 mouse_genomes_project 3 48355666 48360955 - TEC TEC MGP_BALBcJ_T0101061.1 MGP_BALBcJ_G0039097.1 mouse_genomes_project 3 96790963 96791092 - Gm22341 snoRNA snoRNA MGP_BALBcJ_T0062650.1 MGP_BALBcJ_G0027624.1 mouse_genomes_project 3 95992117 96435120 + Zfp697 protein_coding processed_transcript MGP_BALBcJ_T0062651.1 MGP_BALBcJ_G0027624.1 mouse_genomes_project 3 95992137 96162804 + MGP_BALBcJ_P0062651 Zfp697 protein_coding protein_coding MGP_BALBcJ_T0062652.1 MGP_BALBcJ_G0027624.1 mouse_genomes_project 3 95992204 96033452 + MGP_BALBcJ_P0062652 Zfp697 protein_coding protein_coding MGP_BALBcJ_T0014173.1 MGP_BALBcJ_G0012270.1 mouse_genomes_project 3 93311484 93311631 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099770.1 MGP_BALBcJ_G0037806.1 mouse_genomes_project 3 93327705 93327893 - Gm26361 snRNA snRNA MGP_BALBcJ_T0098367.1 MGP_BALBcJ_G0036421.1 mouse_genomes_project 3 151809024 151809106 + pseudogene pseudogene MGP_BALBcJ_T0062081.1 MGP_BALBcJ_G0027466.1 mouse_genomes_project 3 89686425 89687732 + MGP_BALBcJ_P0062081 Sprr2e protein_coding protein_coding MGP_BALBcJ_T0001369.1 MGP_BALBcJ_G0001291.1 mouse_genomes_project 3 146419258 146420129 + TEC TEC MGP_BALBcJ_T0063556.1 MGP_BALBcJ_G0027824.1 mouse_genomes_project 3 122252933 122280128 - MGP_BALBcJ_P0063556 1700006A11Rik protein_coding protein_coding MGP_BALBcJ_T0063557.1 MGP_BALBcJ_G0027824.1 mouse_genomes_project 3 122253168 122280079 - MGP_BALBcJ_P0063557 1700006A11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004226.1 MGP_BALBcJ_G0003719.1 mouse_genomes_project 3 51967007 51996877 + 4931419H13Rik antisense antisense MGP_BALBcJ_T0013934.1 MGP_BALBcJ_G0012031.1 mouse_genomes_project 3 17955343 17955764 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098927.1 MGP_BALBcJ_G0036974.1 mouse_genomes_project 3 103235720 103237660 + Gm43847 sense_intronic sense_intronic MGP_BALBcJ_T0014049.1 MGP_BALBcJ_G0012146.1 mouse_genomes_project 3 56918392 56918907 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007758.1 MGP_BALBcJ_G0006341.1 mouse_genomes_project 3 154596603 154613581 - 4930570G19Rik lincRNA lincRNA MGP_BALBcJ_T0007759.1 MGP_BALBcJ_G0006341.1 mouse_genomes_project 3 154596611 154613476 - 4930570G19Rik lincRNA lincRNA MGP_BALBcJ_T0007760.1 MGP_BALBcJ_G0006341.1 mouse_genomes_project 3 154598265 154613569 - 4930570G19Rik lincRNA lincRNA MGP_BALBcJ_T0007761.1 MGP_BALBcJ_G0006341.1 mouse_genomes_project 3 154610584 154613640 - 4930570G19Rik lincRNA lincRNA MGP_BALBcJ_T0007516.1 MGP_BALBcJ_G0006152.1 mouse_genomes_project 3 49082789 49085031 + Gm37170 lincRNA lincRNA MGP_BALBcJ_T0017952.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113754189 113760995 - A930005H10Rik processed_transcript antisense MGP_BALBcJ_T0017953.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113754189 113761031 - A930005H10Rik processed_transcript antisense MGP_BALBcJ_T0017954.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113754191 113760854 - A930005H10Rik processed_transcript antisense MGP_BALBcJ_T0017955.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113754394 113761005 - A930005H10Rik processed_transcript antisense MGP_BALBcJ_T0017956.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113758900 113760998 - A930005H10Rik processed_transcript retained_intron MGP_BALBcJ_T0017957.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113758999 113760789 - A930005H10Rik processed_transcript retained_intron MGP_BALBcJ_T0017958.1 MGP_BALBcJ_G0015459.1 mouse_genomes_project 3 113760723 113761031 - A930005H10Rik processed_transcript processed_transcript MGP_BALBcJ_T0061790.1 MGP_BALBcJ_G0027400.1 mouse_genomes_project 3 86469031 86477126 + MGP_BALBcJ_P0061790 Dpm3 protein_coding protein_coding MGP_BALBcJ_T0061791.1 MGP_BALBcJ_G0027400.1 mouse_genomes_project 3 86476600 86477126 + MGP_BALBcJ_P0061791 Dpm3 protein_coding protein_coding MGP_BALBcJ_T0061792.1 MGP_BALBcJ_G0027400.1 mouse_genomes_project 3 86476687 86477128 + Dpm3 protein_coding retained_intron MGP_BALBcJ_T0001144.1 MGP_BALBcJ_G0001069.1 mouse_genomes_project 3 33433811 33436921 - TEC TEC MGP_BALBcJ_T0001378.1 MGP_BALBcJ_G0001300.1 mouse_genomes_project 3 150408856 150410635 + TEC TEC MGP_BALBcJ_T0014083.1 MGP_BALBcJ_G0012180.1 mouse_genomes_project 3 66508234 66509594 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064453.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156071845 156098006 - MGP_BALBcJ_P0064453 Srsf11 protein_coding protein_coding MGP_BALBcJ_T0064454.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156072016 156084810 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064455.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156072291 156093094 - MGP_BALBcJ_P0064455 Srsf11 protein_coding protein_coding MGP_BALBcJ_T0064456.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156072875 156084528 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064457.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156073241 156097918 - MGP_BALBcJ_P0064457 Srsf11 protein_coding protein_coding MGP_BALBcJ_T0064458.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156073266 156073893 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064459.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156073715 156074520 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064460.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156073723 156083392 - MGP_BALBcJ_P0064460 Srsf11 protein_coding protein_coding MGP_BALBcJ_T0064461.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156075383 156085057 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064462.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156077715 156079508 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064463.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156080784 156097963 - MGP_BALBcJ_P0064463 Srsf11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064464.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156080824 156097982 - MGP_BALBcJ_P0064464 Srsf11 protein_coding protein_coding MGP_BALBcJ_T0064465.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156083400 156092783 - MGP_BALBcJ_P0064465 Srsf11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064466.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156084317 156092899 - MGP_BALBcJ_P0064466 Srsf11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064467.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156084796 156097973 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064468.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156086122 156097978 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064469.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156087911 156093088 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064470.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156091562 156093082 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0064471.1 MGP_BALBcJ_G0027985.1 mouse_genomes_project 3 156092145 156097981 - Srsf11 protein_coding retained_intron MGP_BALBcJ_T0101056.1 MGP_BALBcJ_G0039092.1 mouse_genomes_project 3 87241507 87241643 - Gm24608 snoRNA snoRNA MGP_BALBcJ_T0098911.1 MGP_BALBcJ_G0036958.1 mouse_genomes_project 3 101819887 101822319 - Gm42700 sense_intronic sense_intronic MGP_BALBcJ_T0099747.1 MGP_BALBcJ_G0037783.1 mouse_genomes_project 3 69848295 69848446 - Gm22451 snRNA snRNA MGP_BALBcJ_T0007559.1 MGP_BALBcJ_G0006185.1 mouse_genomes_project 3 77438208 77494225 - Gm37971 lincRNA lincRNA MGP_BALBcJ_T0101077.1 MGP_BALBcJ_G0039113.1 mouse_genomes_project 3 124897227 124897359 + Gm25501 snoRNA snoRNA MGP_BALBcJ_T0007659.1 MGP_BALBcJ_G0006261.1 mouse_genomes_project 3 120525439 120533336 - Gm43568 lincRNA lincRNA MGP_BALBcJ_T0007660.1 MGP_BALBcJ_G0006261.1 mouse_genomes_project 3 120530385 120532831 - Gm43568 lincRNA lincRNA MGP_BALBcJ_T0007661.1 MGP_BALBcJ_G0006261.1 mouse_genomes_project 3 120531801 120533053 - Gm43568 lincRNA lincRNA MGP_BALBcJ_T0060693.1 MGP_BALBcJ_G0027168.1 mouse_genomes_project 3 48276708 48281946 - MGP_BALBcJ_P0060693 Ndufc1 protein_coding protein_coding MGP_BALBcJ_T0060694.1 MGP_BALBcJ_G0027168.1 mouse_genomes_project 3 48277488 48280439 - Ndufc1 protein_coding retained_intron MGP_BALBcJ_T0060695.1 MGP_BALBcJ_G0027168.1 mouse_genomes_project 3 48277511 48281624 - Ndufc1 protein_coding processed_transcript MGP_BALBcJ_T0060696.1 MGP_BALBcJ_G0027168.1 mouse_genomes_project 3 48277615 48281922 - MGP_BALBcJ_P0060696 Ndufc1 protein_coding protein_coding MGP_BALBcJ_T0001272.1 MGP_BALBcJ_G0001195.1 mouse_genomes_project 3 95639274 95644395 + TEC TEC MGP_BALBcJ_T0061392.1 MGP_BALBcJ_G0027331.1 mouse_genomes_project 3 84207352 84210205 - MGP_BALBcJ_P0061392 protein_coding protein_coding MGP_BALBcJ_T0013872.1 MGP_BALBcJ_G0011969.1 mouse_genomes_project 3 1213133 1213563 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001291.1 MGP_BALBcJ_G0001214.1 mouse_genomes_project 3 116422421 116424327 + TEC TEC MGP_BALBcJ_T0101086.1 MGP_BALBcJ_G0039122.1 mouse_genomes_project 3 151729127 151729243 + Gm22206 snoRNA snoRNA MGP_BALBcJ_T0062717.1 MGP_BALBcJ_G0027645.1 mouse_genomes_project 3 98722131 98791688 - MGP_BALBcJ_P0062717 Ptgfrn protein_coding protein_coding MGP_BALBcJ_T0062718.1 MGP_BALBcJ_G0027645.1 mouse_genomes_project 3 98742854 98755270 - Ptgfrn protein_coding processed_transcript MGP_BALBcJ_T0062719.1 MGP_BALBcJ_G0027645.1 mouse_genomes_project 3 98755756 98760542 - Ptgfrn protein_coding retained_intron MGP_BALBcJ_T0060733.1 MGP_BALBcJ_G0027177.1 mouse_genomes_project 3 50338509 50353211 - MGP_BALBcJ_P0060733 Nhlrc3 protein_coding protein_coding MGP_BALBcJ_T0060734.1 MGP_BALBcJ_G0027177.1 mouse_genomes_project 3 50338514 50353202 - MGP_BALBcJ_P0060734 Nhlrc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060735.1 MGP_BALBcJ_G0027177.1 mouse_genomes_project 3 50348248 50351862 - Nhlrc3 protein_coding retained_intron MGP_BALBcJ_T0060736.1 MGP_BALBcJ_G0027177.1 mouse_genomes_project 3 50348753 50353130 - Nhlrc3 protein_coding retained_intron MGP_BALBcJ_T0060737.1 MGP_BALBcJ_G0027177.1 mouse_genomes_project 3 50351941 50353176 - Nhlrc3 protein_coding retained_intron MGP_BALBcJ_T0007417.1 MGP_BALBcJ_G0006080.1 mouse_genomes_project 3 1920665 1925166 + Gm17308 lincRNA lincRNA MGP_BALBcJ_T0013890.1 MGP_BALBcJ_G0011987.1 mouse_genomes_project 3 6486973 6487356 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014222.1 MGP_BALBcJ_G0012319.1 mouse_genomes_project 3 105665643 105665791 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001163.1 MGP_BALBcJ_G0001088.1 mouse_genomes_project 3 41480355 41486326 + TEC TEC MGP_BALBcJ_T0060935.1 MGP_BALBcJ_G0027223.1 mouse_genomes_project 3 56802121 56822705 + MGP_BALBcJ_P0060935 protein_coding protein_coding MGP_BALBcJ_T0063402.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117623955 117689877 - MGP_BALBcJ_P0063402 Ptbp2 protein_coding protein_coding MGP_BALBcJ_T0063403.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117623955 117689465 - MGP_BALBcJ_P0063403 Ptbp2 protein_coding protein_coding MGP_BALBcJ_T0063404.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117625534 117689311 - MGP_BALBcJ_P0063404 Ptbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063405.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117625559 117631366 - MGP_BALBcJ_P0063405 Ptbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063406.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117625598 117646805 - Ptbp2 protein_coding retained_intron MGP_BALBcJ_T0063407.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117626023 117629613 - Ptbp2 protein_coding retained_intron MGP_BALBcJ_T0063408.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117629332 117646436 - MGP_BALBcJ_P0063408 Ptbp2 protein_coding protein_coding MGP_BALBcJ_T0063409.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117644647 117648694 - Ptbp2 protein_coding retained_intron MGP_BALBcJ_T0063410.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117652561 117689363 - MGP_BALBcJ_P0063410 Ptbp2 protein_coding protein_coding MGP_BALBcJ_T0063411.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117653837 117690537 - Ptbp2 protein_coding processed_transcript MGP_BALBcJ_T0063412.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117666565 117690539 - Ptbp2 protein_coding processed_transcript MGP_BALBcJ_T0063413.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117666570 117689764 - Ptbp2 protein_coding processed_transcript MGP_BALBcJ_T0063414.1 MGP_BALBcJ_G0027796.1 mouse_genomes_project 3 117666572 117689384 - MGP_BALBcJ_P0063414 Ptbp2 protein_coding protein_coding MGP_BALBcJ_T0007490.1 MGP_BALBcJ_G0006136.1 mouse_genomes_project 3 35321909 35338898 - Gm43536 lincRNA lincRNA MGP_BALBcJ_T0007491.1 MGP_BALBcJ_G0006136.1 mouse_genomes_project 3 35322947 35338900 - Gm43536 lincRNA lincRNA MGP_BALBcJ_T0007492.1 MGP_BALBcJ_G0006136.1 mouse_genomes_project 3 35324598 35339140 - Gm43536 lincRNA lincRNA MGP_BALBcJ_T0061058.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64037798 64419621 + MGP_BALBcJ_P0061058 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061059.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042039 64053540 + MGP_BALBcJ_P0061059 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061060.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042041 64421465 + MGP_BALBcJ_P0061060 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061061.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042054 64144073 + Rsrc1 protein_coding retained_intron MGP_BALBcJ_T0061062.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042054 64416789 + MGP_BALBcJ_P0061062 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061063.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042072 64421460 + MGP_BALBcJ_P0061063 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061064.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042073 64419620 + MGP_BALBcJ_P0061064 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061065.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042336 64421466 + MGP_BALBcJ_P0061065 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061066.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64042347 64051778 + MGP_BALBcJ_P0061066 Rsrc1 protein_coding protein_coding MGP_BALBcJ_T0061067.1 MGP_BALBcJ_G0027251.1 mouse_genomes_project 3 64048022 64051959 + Rsrc1 protein_coding retained_intron MGP_BALBcJ_T0064150.1 MGP_BALBcJ_G0027937.1 mouse_genomes_project 3 143995096 144051804 - MGP_BALBcJ_P0064150 Wdr63 protein_coding protein_coding MGP_BALBcJ_T0064151.1 MGP_BALBcJ_G0027937.1 mouse_genomes_project 3 143995098 144001806 - Wdr63 protein_coding processed_transcript MGP_BALBcJ_T0064152.1 MGP_BALBcJ_G0027937.1 mouse_genomes_project 3 143997357 144003058 - Wdr63 protein_coding processed_transcript MGP_BALBcJ_T0102473.1 MGP_BALBcJ_G0040289.1 mouse_genomes_project 3 85732832 85733403 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061093.1 MGP_BALBcJ_G0027260.1 mouse_genomes_project 3 65775848 65783752 + MGP_BALBcJ_P0061093 Il12a protein_coding protein_coding MGP_BALBcJ_T0061094.1 MGP_BALBcJ_G0027260.1 mouse_genomes_project 3 65776628 65783748 + MGP_BALBcJ_P0061094 Il12a protein_coding protein_coding MGP_BALBcJ_T0061095.1 MGP_BALBcJ_G0027260.1 mouse_genomes_project 3 65776731 65783296 + Il12a protein_coding retained_intron MGP_BALBcJ_T0061096.1 MGP_BALBcJ_G0027260.1 mouse_genomes_project 3 65779197 65783228 + Il12a protein_coding retained_intron MGP_BALBcJ_T0061097.1 MGP_BALBcJ_G0027260.1 mouse_genomes_project 3 65779225 65783750 + Il12a protein_coding retained_intron MGP_BALBcJ_T0061098.1 MGP_BALBcJ_G0027260.1 mouse_genomes_project 3 65779225 65783752 + Il12a protein_coding retained_intron MGP_BALBcJ_T0061540.1 MGP_BALBcJ_G0027363.1 mouse_genomes_project 3 85574819 85580776 - MGP_BALBcJ_P0061540 Tmem79 protein_coding protein_coding MGP_BALBcJ_T0061541.1 MGP_BALBcJ_G0027363.1 mouse_genomes_project 3 85575210 85580540 - MGP_BALBcJ_P0061541 Tmem79 protein_coding protein_coding MGP_BALBcJ_T0061542.1 MGP_BALBcJ_G0027363.1 mouse_genomes_project 3 85575211 85580726 - MGP_BALBcJ_P0061542 Tmem79 protein_coding protein_coding MGP_BALBcJ_T0061543.1 MGP_BALBcJ_G0027363.1 mouse_genomes_project 3 85579409 85582420 - MGP_BALBcJ_P0061543 Tmem79 protein_coding protein_coding MGP_BALBcJ_T0004272.1 MGP_BALBcJ_G0003753.1 mouse_genomes_project 3 91778829 91788896 - Gm43401 antisense antisense MGP_BALBcJ_T0062643.1 MGP_BALBcJ_G0027621.1 mouse_genomes_project 3 95834822 95849401 + MGP_BALBcJ_P0062643 Reg4 protein_coding protein_coding MGP_BALBcJ_T0060319.1 MGP_BALBcJ_G0027104.1 mouse_genomes_project 3 27984812 27999957 + MGP_BALBcJ_P0060319 Cldn11 protein_coding protein_coding MGP_BALBcJ_T0014231.1 MGP_BALBcJ_G0012328.1 mouse_genomes_project 3 107686070 107686554 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014126.1 MGP_BALBcJ_G0012223.1 mouse_genomes_project 3 81731532 81732116 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061667.1 MGP_BALBcJ_G0027383.1 mouse_genomes_project 3 86110310 86119128 - MGP_BALBcJ_P0061667 Msto1 protein_coding protein_coding MGP_BALBcJ_T0061668.1 MGP_BALBcJ_G0027383.1 mouse_genomes_project 3 86113824 86117272 - Msto1 protein_coding retained_intron MGP_BALBcJ_T0061669.1 MGP_BALBcJ_G0027383.1 mouse_genomes_project 3 86114812 86119196 - MGP_BALBcJ_P0061669 Msto1 protein_coding protein_coding MGP_BALBcJ_T0061670.1 MGP_BALBcJ_G0027383.1 mouse_genomes_project 3 86114841 86119100 - Msto1 protein_coding retained_intron MGP_BALBcJ_T0061671.1 MGP_BALBcJ_G0027383.1 mouse_genomes_project 3 86116556 86119079 - Msto1 protein_coding retained_intron MGP_BALBcJ_T0007690.1 MGP_BALBcJ_G0006287.1 mouse_genomes_project 3 132323752 132496136 - lincRNA lincRNA MGP_BALBcJ_T0010541.1 MGP_BALBcJ_G0008666.1 mouse_genomes_project 3 133033718 133033824 + Gm24048 miRNA miRNA MGP_BALBcJ_T0014149.1 MGP_BALBcJ_G0012246.1 mouse_genomes_project 3 88288941 88289244 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001159.1 MGP_BALBcJ_G0001084.1 mouse_genomes_project 3 38465645 38466567 - TEC TEC MGP_BALBcJ_T0064078.1 MGP_BALBcJ_G0027920.1 mouse_genomes_project 3 142434418 142461178 + protein_coding processed_transcript MGP_BALBcJ_T0064079.1 MGP_BALBcJ_G0027920.1 mouse_genomes_project 3 142434540 142461601 + MGP_BALBcJ_P0064079 protein_coding protein_coding MGP_BALBcJ_T0064080.1 MGP_BALBcJ_G0027920.1 mouse_genomes_project 3 142434807 142461582 + MGP_BALBcJ_P0064080 protein_coding protein_coding MGP_BALBcJ_T0064081.1 MGP_BALBcJ_G0027920.1 mouse_genomes_project 3 142434828 142437527 + protein_coding retained_intron MGP_BALBcJ_T0064082.1 MGP_BALBcJ_G0027920.1 mouse_genomes_project 3 142441766 142459353 + MGP_BALBcJ_P0064082 protein_coding protein_coding MGP_BALBcJ_T0064083.1 MGP_BALBcJ_G0027920.1 mouse_genomes_project 3 142454345 142455511 + protein_coding retained_intron MGP_BALBcJ_T0099053.1 MGP_BALBcJ_G0037090.1 mouse_genomes_project 3 89416664 89459115 - 4930511M18Rik sense_overlapping sense_overlapping MGP_BALBcJ_T0007635.1 MGP_BALBcJ_G0006243.1 mouse_genomes_project 3 105988408 106002119 + Gm42754 lincRNA lincRNA MGP_BALBcJ_T0098928.1 MGP_BALBcJ_G0036975.1 mouse_genomes_project 3 103464841 103466275 - Gm43328 sense_intronic sense_intronic MGP_BALBcJ_T0064332.1 MGP_BALBcJ_G0027964.1 mouse_genomes_project 3 150485538 150684755 - MGP_BALBcJ_P0064332 Ak5 protein_coding protein_coding MGP_BALBcJ_T0064333.1 MGP_BALBcJ_G0027964.1 mouse_genomes_project 3 150486586 150549323 - MGP_BALBcJ_P0064333 Ak5 protein_coding protein_coding MGP_BALBcJ_T0064334.1 MGP_BALBcJ_G0027964.1 mouse_genomes_project 3 150495426 150501201 - Ak5 protein_coding retained_intron MGP_BALBcJ_T0001259.1 MGP_BALBcJ_G0001182.1 mouse_genomes_project 3 90725555 90726754 + TEC TEC MGP_BALBcJ_T0060080.1 MGP_BALBcJ_G0027060.1 mouse_genomes_project 3 14925959 14929303 + MGP_BALBcJ_P0060080 Bhlhe22 protein_coding protein_coding MGP_BALBcJ_T0014137.1 MGP_BALBcJ_G0012234.1 mouse_genomes_project 3 84266820 84267349 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098904.1 MGP_BALBcJ_G0036951.1 mouse_genomes_project 3 101319059 101320319 + Gm43066 sense_intronic sense_intronic MGP_BALBcJ_T0060898.1 MGP_BALBcJ_G0027212.1 mouse_genomes_project 3 55547403 55564761 - MGP_BALBcJ_P0060898 Siah2 protein_coding protein_coding MGP_BALBcJ_T0060899.1 MGP_BALBcJ_G0027212.1 mouse_genomes_project 3 55548641 55558486 - Siah2 protein_coding processed_transcript MGP_BALBcJ_T0001203.1 MGP_BALBcJ_G0001126.1 mouse_genomes_project 3 49987308 49989970 + TEC TEC MGP_BALBcJ_T0064287.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150267317 150297321 - MGP_BALBcJ_P0064287 Nexn protein_coding protein_coding MGP_BALBcJ_T0064288.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150267317 150296770 - MGP_BALBcJ_P0064288 Nexn protein_coding protein_coding MGP_BALBcJ_T0064289.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150267545 150286400 - MGP_BALBcJ_P0064289 Nexn protein_coding protein_coding MGP_BALBcJ_T0064290.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150267598 150278244 - MGP_BALBcJ_P0064290 Nexn protein_coding protein_coding MGP_BALBcJ_T0064291.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150267630 150286400 - MGP_BALBcJ_P0064291 Nexn protein_coding protein_coding MGP_BALBcJ_T0064292.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150268231 150274805 - Nexn protein_coding processed_transcript MGP_BALBcJ_T0064293.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150272719 150274116 - Nexn protein_coding retained_intron MGP_BALBcJ_T0064294.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150273935 150296771 - MGP_BALBcJ_P0064294 Nexn protein_coding protein_coding MGP_BALBcJ_T0064295.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150273991 150286454 - MGP_BALBcJ_P0064295 Nexn protein_coding protein_coding MGP_BALBcJ_T0064296.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150278000 150278444 - Nexn protein_coding retained_intron MGP_BALBcJ_T0064297.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150278011 150296798 - MGP_BALBcJ_P0064297 Nexn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064298.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150278042 150294509 - MGP_BALBcJ_P0064298 Nexn protein_coding protein_coding MGP_BALBcJ_T0064299.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150278060 150292538 - MGP_BALBcJ_P0064299 Nexn protein_coding protein_coding MGP_BALBcJ_T0064300.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150278162 150293533 - MGP_BALBcJ_P0064300 Nexn protein_coding protein_coding MGP_BALBcJ_T0064301.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150282491 150297353 - Nexn protein_coding retained_intron MGP_BALBcJ_T0064302.1 MGP_BALBcJ_G0027960.1 mouse_genomes_project 3 150282704 150283073 - Nexn protein_coding retained_intron MGP_BALBcJ_T0062511.1 MGP_BALBcJ_G0027584.1 mouse_genomes_project 3 93804233 93805862 - MGP_BALBcJ_P0062511 Hist2h4 protein_coding protein_coding MGP_BALBcJ_T0007733.1 MGP_BALBcJ_G0006324.1 mouse_genomes_project 3 145341936 145353608 + Gm36831 lincRNA lincRNA MGP_BALBcJ_T0064410.1 MGP_BALBcJ_G0027977.1 mouse_genomes_project 3 152820923 153091304 - MGP_BALBcJ_P0064410 Tnni3k protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064411.1 MGP_BALBcJ_G0027977.1 mouse_genomes_project 3 152820931 153091304 - MGP_BALBcJ_P0064411 Tnni3k protein_coding protein_coding MGP_BALBcJ_T0064412.1 MGP_BALBcJ_G0027977.1 mouse_genomes_project 3 153065896 153091247 - Tnni3k protein_coding retained_intron MGP_BALBcJ_T0004274.1 MGP_BALBcJ_G0003755.1 mouse_genomes_project 3 92501190 92503777 - A730011C13Rik antisense antisense MGP_BALBcJ_T0004275.1 MGP_BALBcJ_G0003755.1 mouse_genomes_project 3 92501823 92504131 - A730011C13Rik antisense antisense MGP_BALBcJ_T0014141.1 MGP_BALBcJ_G0012238.1 mouse_genomes_project 3 85682948 85687572 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014065.1 MGP_BALBcJ_G0012162.1 mouse_genomes_project 3 63034978 63035228 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001229.1 MGP_BALBcJ_G0001152.1 mouse_genomes_project 3 62928144 62929705 - TEC TEC MGP_BALBcJ_T0001265.1 MGP_BALBcJ_G0001188.1 mouse_genomes_project 3 94037109 94039965 - TEC TEC MGP_BALBcJ_T0007543.1 MGP_BALBcJ_G0006173.1 mouse_genomes_project 3 66203338 66232007 + Gm1647 lincRNA lincRNA MGP_BALBcJ_T0102482.1 MGP_BALBcJ_G0040298.1 mouse_genomes_project 3 91033541 91033736 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0063940.1 MGP_BALBcJ_G0027891.1 mouse_genomes_project 3 135906938 135925570 - MGP_BALBcJ_P0063940 Gm5105 protein_coding protein_coding MGP_BALBcJ_T0061349.1 MGP_BALBcJ_G0027321.1 mouse_genomes_project 3 82775523 82851006 + MGP_BALBcJ_P0061349 Gatb protein_coding protein_coding MGP_BALBcJ_T0061350.1 MGP_BALBcJ_G0027321.1 mouse_genomes_project 3 82775523 82841962 + MGP_BALBcJ_P0061350 Gatb protein_coding protein_coding MGP_BALBcJ_T0061351.1 MGP_BALBcJ_G0027321.1 mouse_genomes_project 3 82775531 82848217 + MGP_BALBcJ_P0061351 Gatb protein_coding protein_coding MGP_BALBcJ_T0061352.1 MGP_BALBcJ_G0027321.1 mouse_genomes_project 3 82775536 82777446 + Gatb protein_coding processed_transcript MGP_BALBcJ_T0061353.1 MGP_BALBcJ_G0027321.1 mouse_genomes_project 3 82775548 82849236 + MGP_BALBcJ_P0061353 Gatb protein_coding unknown_likely_coding MGP_BALBcJ_T0061354.1 MGP_BALBcJ_G0027321.1 mouse_genomes_project 3 82775599 82849542 + Gatb protein_coding processed_transcript MGP_BALBcJ_T0099743.1 MGP_BALBcJ_G0037779.1 mouse_genomes_project 3 62588740 62588833 + Gm22279 snRNA snRNA MGP_BALBcJ_T0099052.1 MGP_BALBcJ_G0037089.1 mouse_genomes_project 3 62026661 62286259 + sense_overlapping sense_overlapping MGP_BALBcJ_T0014337.1 MGP_BALBcJ_G0012434.1 mouse_genomes_project 3 140516768 140517830 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001388.1 MGP_BALBcJ_G0001310.1 mouse_genomes_project 3 154757890 154759222 + TEC TEC MGP_BALBcJ_T0102496.1 MGP_BALBcJ_G0040312.1 mouse_genomes_project 3 105787026 105788944 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0062082.1 MGP_BALBcJ_G0027467.1 mouse_genomes_project 3 89698780 89700038 + MGP_BALBcJ_P0062082 Sprr2f protein_coding protein_coding MGP_BALBcJ_T0001130.1 MGP_BALBcJ_G0001055.1 mouse_genomes_project 3 29289531 29290772 + TEC TEC MGP_BALBcJ_T0013995.1 MGP_BALBcJ_G0012092.1 mouse_genomes_project 3 41322109 41322518 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063573.1 MGP_BALBcJ_G0027828.1 mouse_genomes_project 3 124245617 124321995 + MGP_BALBcJ_P0063573 Arsj protein_coding protein_coding MGP_BALBcJ_T0001224.1 MGP_BALBcJ_G0001147.1 mouse_genomes_project 3 57457572 57461562 + TEC TEC MGP_BALBcJ_T0063142.1 MGP_BALBcJ_G0027742.1 mouse_genomes_project 3 105963832 105972545 - MGP_BALBcJ_P0063142 Atxn7l2 protein_coding protein_coding MGP_BALBcJ_T0063143.1 MGP_BALBcJ_G0027742.1 mouse_genomes_project 3 105963838 105970185 - Atxn7l2 protein_coding retained_intron MGP_BALBcJ_T0063144.1 MGP_BALBcJ_G0027742.1 mouse_genomes_project 3 105963969 105972052 - MGP_BALBcJ_P0063144 Atxn7l2 protein_coding protein_coding MGP_BALBcJ_T0063145.1 MGP_BALBcJ_G0027742.1 mouse_genomes_project 3 105968692 105971182 - MGP_BALBcJ_P0063145 Atxn7l2 protein_coding protein_coding MGP_BALBcJ_T0063146.1 MGP_BALBcJ_G0027742.1 mouse_genomes_project 3 105970586 105972079 - Atxn7l2 protein_coding processed_transcript MGP_BALBcJ_T0014278.1 MGP_BALBcJ_G0012375.1 mouse_genomes_project 3 121851720 121852779 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014279.1 MGP_BALBcJ_G0012376.1 mouse_genomes_project 3 122159582 122159829 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014313.1 MGP_BALBcJ_G0012410.1 mouse_genomes_project 3 133840360 133840725 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010520.1 MGP_BALBcJ_G0008645.1 mouse_genomes_project 3 93265400 93265463 - Mir7014 miRNA miRNA MGP_BALBcJ_T0014155.1 MGP_BALBcJ_G0012252.1 mouse_genomes_project 3 90003348 90003976 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014331.1 MGP_BALBcJ_G0012428.1 mouse_genomes_project 3 138360981 138361531 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063089.1 MGP_BALBcJ_G0027729.1 mouse_genomes_project 3 105641954 105644820 + MGP_BALBcJ_P0063089 Gstm5 protein_coding protein_coding MGP_BALBcJ_T0063090.1 MGP_BALBcJ_G0027729.1 mouse_genomes_project 3 105641969 105644709 + MGP_BALBcJ_P0063090 Gstm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063091.1 MGP_BALBcJ_G0027729.1 mouse_genomes_project 3 105641979 105644820 + MGP_BALBcJ_P0063091 Gstm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063092.1 MGP_BALBcJ_G0027729.1 mouse_genomes_project 3 105642074 105644479 + MGP_BALBcJ_P0063092 Gstm5 protein_coding protein_coding MGP_BALBcJ_T0063093.1 MGP_BALBcJ_G0027729.1 mouse_genomes_project 3 105642087 105644683 + MGP_BALBcJ_P0063093 Gstm5 protein_coding protein_coding MGP_BALBcJ_T0063094.1 MGP_BALBcJ_G0027729.1 mouse_genomes_project 3 105642380 105644812 + MGP_BALBcJ_P0063094 Gstm5 protein_coding protein_coding MGP_BALBcJ_T0014200.1 MGP_BALBcJ_G0012297.1 mouse_genomes_project 3 99756896 99757174 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102460.1 MGP_BALBcJ_G0040276.1 mouse_genomes_project 3 60988232 60994172 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0062318.1 MGP_BALBcJ_G0027547.1 mouse_genomes_project 3 92748527 92756436 + MGP_BALBcJ_P0062318 Cdc42se1 protein_coding protein_coding MGP_BALBcJ_T0062319.1 MGP_BALBcJ_G0027547.1 mouse_genomes_project 3 92748605 92752408 + Cdc42se1 protein_coding retained_intron MGP_BALBcJ_T0062320.1 MGP_BALBcJ_G0027547.1 mouse_genomes_project 3 92748747 92754609 + MGP_BALBcJ_P0062320 Cdc42se1 protein_coding protein_coding MGP_BALBcJ_T0062322.1 MGP_BALBcJ_G0027547.1 mouse_genomes_project 3 92752313 92754567 + MGP_BALBcJ_P0062322 Cdc42se1 protein_coding protein_coding MGP_BALBcJ_T0062323.1 MGP_BALBcJ_G0027547.1 mouse_genomes_project 3 92752319 92754689 + MGP_BALBcJ_P0062323 Cdc42se1 protein_coding protein_coding MGP_BALBcJ_T0062133.1 MGP_BALBcJ_G0027507.1 mouse_genomes_project 3 90725556 90731408 + MGP_BALBcJ_P0062133 Rptn protein_coding protein_coding MGP_BALBcJ_T0004310.1 MGP_BALBcJ_G0003777.1 mouse_genomes_project 3 103173507 103184652 - Kcnd3os antisense antisense MGP_BALBcJ_T0004311.1 MGP_BALBcJ_G0003777.1 mouse_genomes_project 3 103181063 103185871 - Kcnd3os antisense antisense MGP_BALBcJ_T0062741.1 MGP_BALBcJ_G0027652.1 mouse_genomes_project 3 99775776 99836899 + MGP_BALBcJ_P0062741 Casq2 protein_coding protein_coding MGP_BALBcJ_T0062742.1 MGP_BALBcJ_G0027652.1 mouse_genomes_project 3 99775907 99836899 + MGP_BALBcJ_P0062742 Casq2 protein_coding protein_coding MGP_BALBcJ_T0062743.1 MGP_BALBcJ_G0027652.1 mouse_genomes_project 3 99776000 99835717 + MGP_BALBcJ_P0062743 Casq2 protein_coding protein_coding MGP_BALBcJ_T0062744.1 MGP_BALBcJ_G0027652.1 mouse_genomes_project 3 99816141 99835734 + Casq2 protein_coding processed_transcript MGP_BALBcJ_T0062745.1 MGP_BALBcJ_G0027652.1 mouse_genomes_project 3 99834436 99835971 + Casq2 protein_coding retained_intron MGP_BALBcJ_T0060296.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27727830 27798059 - MGP_BALBcJ_P0060296 Phc3 protein_coding protein_coding MGP_BALBcJ_T0060297.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27727983 27798063 - MGP_BALBcJ_P0060297 Phc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060298.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27735243 27798063 - MGP_BALBcJ_P0060298 Phc3 protein_coding protein_coding MGP_BALBcJ_T0060299.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27735444 27798063 - MGP_BALBcJ_P0060299 Phc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060300.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27735770 27798057 - MGP_BALBcJ_P0060300 Phc3 protein_coding protein_coding MGP_BALBcJ_T0060301.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27735770 27798057 - MGP_BALBcJ_P0060301 Phc3 protein_coding protein_coding MGP_BALBcJ_T0060302.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27735770 27798057 - MGP_BALBcJ_P0060302 Phc3 protein_coding protein_coding MGP_BALBcJ_T0060303.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27735795 27794571 - MGP_BALBcJ_P0060303 Phc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0060304.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27749693 27761774 - Phc3 protein_coding retained_intron MGP_BALBcJ_T0060305.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27757783 27798073 - MGP_BALBcJ_P0060305 Phc3 protein_coding protein_coding MGP_BALBcJ_T0060306.1 MGP_BALBcJ_G0027101.1 mouse_genomes_project 3 27787052 27794593 - Phc3 protein_coding retained_intron MGP_BALBcJ_T0007424.1 MGP_BALBcJ_G0006085.1 mouse_genomes_project 3 5885470 5894560 + 4930539M17Rik lincRNA lincRNA MGP_BALBcJ_T0004221.1 MGP_BALBcJ_G0003715.1 mouse_genomes_project 3 49153605 49154606 - Gm20402 antisense antisense MGP_BALBcJ_T0099720.1 MGP_BALBcJ_G0037756.1 mouse_genomes_project 3 13702399 13702463 - Gm26485 snRNA snRNA MGP_BALBcJ_T0013929.1 MGP_BALBcJ_G0012026.1 mouse_genomes_project 3 16798801 16799361 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007564.1 MGP_BALBcJ_G0006190.1 mouse_genomes_project 3 79977922 79994885 - Gm43348 lincRNA lincRNA MGP_BALBcJ_T0098891.1 MGP_BALBcJ_G0036938.1 mouse_genomes_project 3 98301063 98303184 - Gm42869 sense_intronic sense_intronic MGP_BALBcJ_T0014146.1 MGP_BALBcJ_G0012243.1 mouse_genomes_project 3 87963914 87964648 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013899.1 MGP_BALBcJ_G0011996.1 mouse_genomes_project 3 9204673 9205040 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007604.1 MGP_BALBcJ_G0006217.1 mouse_genomes_project 3 93983100 93983668 + Gm26654 lincRNA lincRNA MGP_BALBcJ_T0014299.1 MGP_BALBcJ_G0012396.1 mouse_genomes_project 3 131418479 131418754 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064188.1 MGP_BALBcJ_G0027946.1 mouse_genomes_project 3 144525852 144581138 + MGP_BALBcJ_P0064188 Uox protein_coding protein_coding MGP_BALBcJ_T0064191.1 MGP_BALBcJ_G0027946.1 mouse_genomes_project 3 144553080 144587451 + MGP_BALBcJ_P0064191 Uox protein_coding protein_coding MGP_BALBcJ_T0064192.1 MGP_BALBcJ_G0027946.1 mouse_genomes_project 3 144553151 144568335 + MGP_BALBcJ_P0064192 Uox protein_coding protein_coding MGP_BALBcJ_T0064193.1 MGP_BALBcJ_G0027946.1 mouse_genomes_project 3 144553168 144585791 + MGP_BALBcJ_P0064193 Uox protein_coding protein_coding MGP_BALBcJ_T0064194.1 MGP_BALBcJ_G0027946.1 mouse_genomes_project 3 144553169 144568453 + Uox protein_coding retained_intron MGP_BALBcJ_T0064195.1 MGP_BALBcJ_G0027946.1 mouse_genomes_project 3 144565994 144568358 + Uox protein_coding retained_intron MGP_BALBcJ_T0001392.1 MGP_BALBcJ_G0001314.1 mouse_genomes_project 3 155254249 155255448 - TEC TEC MGP_BALBcJ_T0061499.1 MGP_BALBcJ_G0027355.1 mouse_genomes_project 3 85305406 85314042 - MGP_BALBcJ_P0061499 Ttc24 protein_coding protein_coding MGP_BALBcJ_T0061500.1 MGP_BALBcJ_G0027355.1 mouse_genomes_project 3 85305809 85308057 - MGP_BALBcJ_P0061500 Ttc24 protein_coding protein_coding MGP_BALBcJ_T0060101.1 MGP_BALBcJ_G0027065.1 mouse_genomes_project 3 16395406 16493511 + MGP_BALBcJ_P0060101 Dnajc5b protein_coding protein_coding MGP_BALBcJ_T0060102.1 MGP_BALBcJ_G0027065.1 mouse_genomes_project 3 16395426 16493641 + MGP_BALBcJ_P0060102 Dnajc5b protein_coding protein_coding MGP_BALBcJ_T0060103.1 MGP_BALBcJ_G0027065.1 mouse_genomes_project 3 16418248 16493529 + MGP_BALBcJ_P0060103 Dnajc5b protein_coding protein_coding MGP_BALBcJ_T0060104.1 MGP_BALBcJ_G0027065.1 mouse_genomes_project 3 16418824 16493640 + MGP_BALBcJ_P0060104 Dnajc5b protein_coding protein_coding MGP_BALBcJ_T0004190.1 MGP_BALBcJ_G0003693.1 mouse_genomes_project 3 25633238 25640724 - Gm33051 antisense antisense MGP_BALBcJ_T0063521.1 MGP_BALBcJ_G0027817.1 mouse_genomes_project 3 120921745 120951001 - MGP_BALBcJ_P0063521 Myoz2 protein_coding protein_coding MGP_BALBcJ_T0063522.1 MGP_BALBcJ_G0027817.1 mouse_genomes_project 3 120922056 120950830 - MGP_BALBcJ_P0063522 Myoz2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063523.1 MGP_BALBcJ_G0027817.1 mouse_genomes_project 3 120922141 120950990 - Myoz2 protein_coding processed_transcript MGP_BALBcJ_T0063524.1 MGP_BALBcJ_G0027817.1 mouse_genomes_project 3 120929149 120950949 - Myoz2 protein_coding processed_transcript MGP_BALBcJ_T0063525.1 MGP_BALBcJ_G0027817.1 mouse_genomes_project 3 120940109 120950938 - Myoz2 protein_coding retained_intron MGP_BALBcJ_T0098894.1 MGP_BALBcJ_G0036941.1 mouse_genomes_project 3 98766416 98769075 - Gm43465 sense_intronic sense_intronic MGP_BALBcJ_T0014037.1 MGP_BALBcJ_G0012134.1 mouse_genomes_project 3 54680276 54680772 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101033.1 MGP_BALBcJ_G0039069.1 mouse_genomes_project 3 47698193 47698328 - Gm24503 snoRNA snoRNA MGP_BALBcJ_T0011528.1 MGP_BALBcJ_G0009653.1 mouse_genomes_project 3 105151003 105151336 - Gm24383 misc_RNA misc_RNA MGP_BALBcJ_T0013991.1 MGP_BALBcJ_G0012088.1 mouse_genomes_project 3 40066828 40067285 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013870.1 MGP_BALBcJ_G0011967.1 mouse_genomes_project 3 761510 761829 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099786.1 MGP_BALBcJ_G0037822.1 mouse_genomes_project 3 118233026 118233132 - Gm23733 snRNA snRNA MGP_BALBcJ_T0014128.1 MGP_BALBcJ_G0012225.1 mouse_genomes_project 3 82346137 82346798 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063064.1 MGP_BALBcJ_G0027723.1 mouse_genomes_project 3 105331840 105342382 + MGP_BALBcJ_P0063064 Alx3 protein_coding protein_coding MGP_BALBcJ_T0062090.1 MGP_BALBcJ_G0027474.1 mouse_genomes_project 3 89820928 89822872 - MGP_BALBcJ_P0062090 Sprr1a protein_coding protein_coding MGP_BALBcJ_T0063070.1 MGP_BALBcJ_G0027725.1 mouse_genomes_project 3 105367941 105369706 + MGP_BALBcJ_P0063070 Gm10961 protein_coding protein_coding MGP_BALBcJ_T0007743.1 MGP_BALBcJ_G0006331.1 mouse_genomes_project 3 148593625 148599127 + Gm43470 lincRNA lincRNA MGP_BALBcJ_T0007744.1 MGP_BALBcJ_G0006331.1 mouse_genomes_project 3 148593704 148615768 + Gm43470 lincRNA lincRNA MGP_BALBcJ_T0014093.1 MGP_BALBcJ_G0012190.1 mouse_genomes_project 3 68536339 68536780 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013955.1 MGP_BALBcJ_G0012052.1 mouse_genomes_project 3 30494260 30494613 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014086.1 MGP_BALBcJ_G0012183.1 mouse_genomes_project 3 66804289 66804795 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001208.1 MGP_BALBcJ_G0001131.1 mouse_genomes_project 3 50629625 50631227 + TEC TEC MGP_BALBcJ_T0014328.1 MGP_BALBcJ_G0012425.1 mouse_genomes_project 3 137260741 137261185 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063308.1 MGP_BALBcJ_G0027776.1 mouse_genomes_project 3 113869789 113870801 + Extl2 protein_coding processed_transcript MGP_BALBcJ_T0063309.1 MGP_BALBcJ_G0027776.1 mouse_genomes_project 3 113869827 113886410 + Extl2 protein_coding processed_transcript MGP_BALBcJ_T0063310.1 MGP_BALBcJ_G0027776.1 mouse_genomes_project 3 113870132 113873172 + Extl2 protein_coding processed_transcript MGP_BALBcJ_T0063311.1 MGP_BALBcJ_G0027776.1 mouse_genomes_project 3 113872995 113890634 + MGP_BALBcJ_P0063311 Extl2 protein_coding protein_coding MGP_BALBcJ_T0101081.1 MGP_BALBcJ_G0039117.1 mouse_genomes_project 3 131428469 131428601 - Gm23011 snoRNA snoRNA MGP_BALBcJ_T0001145.1 MGP_BALBcJ_G0001070.1 mouse_genomes_project 3 34131692 34132168 + TEC TEC MGP_BALBcJ_T0001165.1 MGP_BALBcJ_G0001090.1 mouse_genomes_project 3 42095148 42096783 - TEC TEC MGP_BALBcJ_T0001278.1 MGP_BALBcJ_G0001201.1 mouse_genomes_project 3 104463756 104468434 + TEC TEC MGP_BALBcJ_T0013967.1 MGP_BALBcJ_G0012064.1 mouse_genomes_project 3 33602383 33602635 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001251.1 MGP_BALBcJ_G0001174.1 mouse_genomes_project 3 85269023 85271296 + TEC TEC MGP_BALBcJ_T0061082.1 MGP_BALBcJ_G0027257.1 mouse_genomes_project 3 64952891 65119472 + MGP_BALBcJ_P0061082 Iqcj protein_coding protein_coding MGP_BALBcJ_T0061084.1 MGP_BALBcJ_G0027257.1 mouse_genomes_project 3 64952984 65126957 + MGP_BALBcJ_P0061084 Iqcj protein_coding unknown_likely_coding MGP_BALBcJ_T0014286.1 MGP_BALBcJ_G0012383.1 mouse_genomes_project 3 126195751 126196185 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001330.1 MGP_BALBcJ_G0001253.1 mouse_genomes_project 3 125155702 125161649 - TEC TEC MGP_BALBcJ_T0014001.1 MGP_BALBcJ_G0012098.1 mouse_genomes_project 3 43505315 43505557 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062943.1 MGP_BALBcJ_G0027689.1 mouse_genomes_project 3 103185231 103406227 + MGP_BALBcJ_P0062943 Kcnd3 protein_coding protein_coding MGP_BALBcJ_T0062944.1 MGP_BALBcJ_G0027689.1 mouse_genomes_project 3 103185488 103399813 + Kcnd3 protein_coding retained_intron MGP_BALBcJ_T0062945.1 MGP_BALBcJ_G0027689.1 mouse_genomes_project 3 103186001 103401685 + MGP_BALBcJ_P0062945 Kcnd3 protein_coding protein_coding MGP_BALBcJ_T0062946.1 MGP_BALBcJ_G0027689.1 mouse_genomes_project 3 103191688 103401534 + MGP_BALBcJ_P0062946 Kcnd3 protein_coding protein_coding MGP_BALBcJ_T0062947.1 MGP_BALBcJ_G0027689.1 mouse_genomes_project 3 103401229 103402069 + Kcnd3 protein_coding processed_transcript MGP_BALBcJ_T0004303.1 MGP_BALBcJ_G0003773.1 mouse_genomes_project 3 101484261 101486666 + Gm15886 antisense antisense MGP_BALBcJ_T0004304.1 MGP_BALBcJ_G0003773.1 mouse_genomes_project 3 101484282 101502838 + Gm15886 antisense antisense MGP_BALBcJ_T0004305.1 MGP_BALBcJ_G0003773.1 mouse_genomes_project 3 101484617 101490226 + Gm15886 antisense antisense MGP_BALBcJ_T0004306.1 MGP_BALBcJ_G0003773.1 mouse_genomes_project 3 101489644 101490637 + Gm15886 antisense antisense MGP_BALBcJ_T0102472.1 MGP_BALBcJ_G0040288.1 mouse_genomes_project 3 84773425 84773950 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007666.1 MGP_BALBcJ_G0006266.1 mouse_genomes_project 3 125826399 125865168 + 9830132P13Rik lincRNA lincRNA MGP_BALBcJ_T0062118.1 MGP_BALBcJ_G0027499.1 mouse_genomes_project 3 90312266 90313487 + MGP_BALBcJ_P0062118 Lce3e protein_coding protein_coding MGP_BALBcJ_T0063184.1 MGP_BALBcJ_G0027751.1 mouse_genomes_project 3 106297385 106300726 + 1700013F07Rik protein_coding processed_transcript MGP_BALBcJ_T0063185.1 MGP_BALBcJ_G0027751.1 mouse_genomes_project 3 106300566 106306087 + 1700013F07Rik protein_coding processed_transcript MGP_BALBcJ_T0063186.1 MGP_BALBcJ_G0027751.1 mouse_genomes_project 3 106300573 106307729 + MGP_BALBcJ_P0063186 1700013F07Rik protein_coding protein_coding MGP_BALBcJ_T0007526.1 MGP_BALBcJ_G0006161.1 mouse_genomes_project 3 54488278 54501343 - Gm26671 lincRNA lincRNA MGP_BALBcJ_T0007527.1 MGP_BALBcJ_G0006161.1 mouse_genomes_project 3 54496506 54501404 - Gm26671 lincRNA lincRNA MGP_BALBcJ_T0007528.1 MGP_BALBcJ_G0006161.1 mouse_genomes_project 3 54496860 54501374 - Gm26671 lincRNA lincRNA MGP_BALBcJ_T0007529.1 MGP_BALBcJ_G0006161.1 mouse_genomes_project 3 54498425 54501410 - Gm26671 lincRNA lincRNA MGP_BALBcJ_T0013963.1 MGP_BALBcJ_G0012060.1 mouse_genomes_project 3 33123378 33124321 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101024.1 MGP_BALBcJ_G0039060.1 mouse_genomes_project 3 30225903 30226046 - Gm24780 snoRNA snoRNA MGP_BALBcJ_T0007601.1 MGP_BALBcJ_G0006214.1 mouse_genomes_project 3 93915020 93918129 + lincRNA lincRNA MGP_BALBcJ_T0017941.1 MGP_BALBcJ_G0015454.1 mouse_genomes_project 3 102480340 102500288 - Gm43584 processed_transcript processed_transcript MGP_BALBcJ_T0004389.1 MGP_BALBcJ_G0003828.1 mouse_genomes_project 3 150955440 150956076 + Gm16231 antisense antisense MGP_BALBcJ_T0014204.1 MGP_BALBcJ_G0012301.1 mouse_genomes_project 3 100379056 100379183 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001216.1 MGP_BALBcJ_G0001139.1 mouse_genomes_project 3 53068566 53072182 - TEC TEC MGP_BALBcJ_T0007587.1 MGP_BALBcJ_G0006202.1 mouse_genomes_project 3 85787042 85788345 - Gm37584 lincRNA lincRNA MGP_BALBcJ_T0007668.1 MGP_BALBcJ_G0006268.1 mouse_genomes_project 3 126526629 126788604 + lincRNA lincRNA MGP_BALBcJ_T0007632.1 MGP_BALBcJ_G0006240.1 mouse_genomes_project 3 105559604 105572867 - Gm36211 lincRNA lincRNA MGP_BALBcJ_T0063662.1 MGP_BALBcJ_G0027838.1 mouse_genomes_project 3 125776177 125803803 - MGP_BALBcJ_P0063662 5730508B09Rik protein_coding protein_coding MGP_BALBcJ_T0063663.1 MGP_BALBcJ_G0027838.1 mouse_genomes_project 3 125776799 125803767 - MGP_BALBcJ_P0063663 5730508B09Rik protein_coding protein_coding MGP_BALBcJ_T0063154.1 MGP_BALBcJ_G0027746.1 mouse_genomes_project 3 106125661 106141368 + MGP_BALBcJ_P0063154 Mybphl protein_coding protein_coding MGP_BALBcJ_T0013976.1 MGP_BALBcJ_G0012073.1 mouse_genomes_project 3 34500563 34501209 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007647.1 MGP_BALBcJ_G0006254.1 mouse_genomes_project 3 115862877 115867029 + 4921521D15Rik lincRNA lincRNA MGP_BALBcJ_T0001358.1 MGP_BALBcJ_G0001280.1 mouse_genomes_project 3 133539533 133543430 - TEC TEC MGP_BALBcJ_T0007649.1 MGP_BALBcJ_G0006256.1 mouse_genomes_project 3 118518486 118794593 - lincRNA lincRNA MGP_BALBcJ_T0007650.1 MGP_BALBcJ_G0006256.1 mouse_genomes_project 3 118610179 118794592 - lincRNA lincRNA MGP_BALBcJ_T0007651.1 MGP_BALBcJ_G0006256.1 mouse_genomes_project 3 118613948 118794574 - lincRNA lincRNA MGP_BALBcJ_T0007652.1 MGP_BALBcJ_G0006256.1 mouse_genomes_project 3 118685576 118794551 - lincRNA lincRNA MGP_BALBcJ_T0061241.1 MGP_BALBcJ_G0027293.1 mouse_genomes_project 3 78003582 78073322 - MGP_BALBcJ_P0061241 Glrb protein_coding protein_coding MGP_BALBcJ_T0061242.1 MGP_BALBcJ_G0027293.1 mouse_genomes_project 3 78003583 78073276 - MGP_BALBcJ_P0061242 Glrb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061243.1 MGP_BALBcJ_G0027293.1 mouse_genomes_project 3 78004944 78071748 - MGP_BALBcJ_P0061243 Glrb protein_coding protein_coding MGP_BALBcJ_T0061244.1 MGP_BALBcJ_G0027293.1 mouse_genomes_project 3 78015426 78073190 - MGP_BALBcJ_P0061244 Glrb protein_coding protein_coding MGP_BALBcJ_T0061245.1 MGP_BALBcJ_G0027293.1 mouse_genomes_project 3 78015433 78017052 - Glrb protein_coding retained_intron MGP_BALBcJ_T0061246.1 MGP_BALBcJ_G0027293.1 mouse_genomes_project 3 78022129 78073251 - MGP_BALBcJ_P0061246 Glrb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001228.1 MGP_BALBcJ_G0001151.1 mouse_genomes_project 3 62747363 62749852 + TEC TEC MGP_BALBcJ_T0004267.1 MGP_BALBcJ_G0003748.1 mouse_genomes_project 3 87141006 87142144 + Gm42809 antisense antisense MGP_BALBcJ_T0014054.1 MGP_BALBcJ_G0012151.1 mouse_genomes_project 3 58220655 58220947 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101062.1 MGP_BALBcJ_G0039098.1 mouse_genomes_project 3 96801995 96802112 - Gm24216 snoRNA snoRNA MGP_BALBcJ_T0061821.1 MGP_BALBcJ_G0027406.1 mouse_genomes_project 3 86562780 86578336 - MGP_BALBcJ_P0061821 Dcst1 protein_coding protein_coding MGP_BALBcJ_T0061822.1 MGP_BALBcJ_G0027406.1 mouse_genomes_project 3 86563584 86568108 - Dcst1 protein_coding retained_intron MGP_BALBcJ_T0061823.1 MGP_BALBcJ_G0027406.1 mouse_genomes_project 3 86565282 86568078 - Dcst1 protein_coding processed_transcript MGP_BALBcJ_T0061824.1 MGP_BALBcJ_G0027406.1 mouse_genomes_project 3 86566190 86567460 - Dcst1 protein_coding retained_intron MGP_BALBcJ_T0061825.1 MGP_BALBcJ_G0027406.1 mouse_genomes_project 3 86570069 86577345 - Dcst1 protein_coding retained_intron MGP_BALBcJ_T0061826.1 MGP_BALBcJ_G0027406.1 mouse_genomes_project 3 86570154 86577346 - Dcst1 protein_coding retained_intron MGP_BALBcJ_T0001258.1 MGP_BALBcJ_G0001181.1 mouse_genomes_project 3 90638561 90641101 + TEC TEC MGP_BALBcJ_T0001315.1 MGP_BALBcJ_G0001238.1 mouse_genomes_project 3 124486257 124490762 + TEC TEC MGP_BALBcJ_T0007463.1 MGP_BALBcJ_G0006112.1 mouse_genomes_project 3 26705039 26747575 + Mannr lincRNA lincRNA MGP_BALBcJ_T0060719.1 MGP_BALBcJ_G0027173.1 mouse_genomes_project 3 48561852 48672023 - MGP_BALBcJ_P0060719 Maml3 protein_coding protein_coding MGP_BALBcJ_T0060720.1 MGP_BALBcJ_G0027173.1 mouse_genomes_project 3 48561852 48982233 - MGP_BALBcJ_P0060720 Maml3 protein_coding protein_coding MGP_BALBcJ_T0060721.1 MGP_BALBcJ_G0027173.1 mouse_genomes_project 3 48669863 48672061 - Maml3 protein_coding retained_intron MGP_BALBcJ_T0063396.1 MGP_BALBcJ_G0027795.1 mouse_genomes_project 3 116458144 117339473 + MGP_BALBcJ_P0063396 Dpyd protein_coding protein_coding MGP_BALBcJ_T0063397.1 MGP_BALBcJ_G0027795.1 mouse_genomes_project 3 116458145 116697772 + Dpyd protein_coding retained_intron MGP_BALBcJ_T0063398.1 MGP_BALBcJ_G0027795.1 mouse_genomes_project 3 116458192 116679771 + Dpyd protein_coding retained_intron MGP_BALBcJ_T0063399.1 MGP_BALBcJ_G0027795.1 mouse_genomes_project 3 116458195 116569622 + MGP_BALBcJ_P0063399 Dpyd protein_coding protein_coding MGP_BALBcJ_T0063400.1 MGP_BALBcJ_G0027795.1 mouse_genomes_project 3 116458201 116459168 + Dpyd protein_coding retained_intron MGP_BALBcJ_T0063401.1 MGP_BALBcJ_G0027795.1 mouse_genomes_project 3 116709922 116800629 + Dpyd protein_coding retained_intron MGP_BALBcJ_T0014296.1 MGP_BALBcJ_G0012393.1 mouse_genomes_project 3 130485141 130485529 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001287.1 MGP_BALBcJ_G0001210.1 mouse_genomes_project 3 114012897 114013923 + TEC TEC MGP_BALBcJ_T0060403.1 MGP_BALBcJ_G0027119.1 mouse_genomes_project 3 30618788 30651764 - MGP_BALBcJ_P0060403 Ccdc39 protein_coding protein_coding MGP_BALBcJ_T0060404.1 MGP_BALBcJ_G0027119.1 mouse_genomes_project 3 30619480 30620978 - Ccdc39 protein_coding retained_intron MGP_BALBcJ_T0060405.1 MGP_BALBcJ_G0027119.1 mouse_genomes_project 3 30625074 30651764 - Ccdc39 protein_coding retained_intron MGP_BALBcJ_T0060406.1 MGP_BALBcJ_G0027119.1 mouse_genomes_project 3 30626613 30651538 - Ccdc39 protein_coding retained_intron MGP_BALBcJ_T0060407.1 MGP_BALBcJ_G0027119.1 mouse_genomes_project 3 30631968 30633923 - Ccdc39 protein_coding retained_intron MGP_BALBcJ_T0060408.1 MGP_BALBcJ_G0027119.1 mouse_genomes_project 3 30645388 30651773 - Ccdc39 protein_coding retained_intron MGP_BALBcJ_T0102466.1 MGP_BALBcJ_G0040282.1 mouse_genomes_project 3 61812230 61813627 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060018.1 MGP_BALBcJ_G0027041.1 mouse_genomes_project 3 7166976 7171345 - protein_coding retained_intron MGP_BALBcJ_T0060019.1 MGP_BALBcJ_G0027041.1 mouse_genomes_project 3 7167382 7178135 - MGP_BALBcJ_P0060019 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060020.1 MGP_BALBcJ_G0027041.1 mouse_genomes_project 3 7167432 7175443 - MGP_BALBcJ_P0060020 protein_coding protein_coding MGP_BALBcJ_T0060021.1 MGP_BALBcJ_G0027041.1 mouse_genomes_project 3 7171275 7173041 - protein_coding retained_intron MGP_BALBcJ_T0060022.1 MGP_BALBcJ_G0027041.1 mouse_genomes_project 3 7172549 7178132 - protein_coding processed_transcript MGP_BALBcJ_T0060023.1 MGP_BALBcJ_G0027041.1 mouse_genomes_project 3 7177308 7178134 - protein_coding processed_transcript MGP_BALBcJ_T0061596.1 MGP_BALBcJ_G0027373.1 mouse_genomes_project 3 85803107 85809388 - MGP_BALBcJ_P0061596 Rab25 protein_coding protein_coding MGP_BALBcJ_T0061597.1 MGP_BALBcJ_G0027373.1 mouse_genomes_project 3 85803387 85809337 - MGP_BALBcJ_P0061597 Rab25 protein_coding protein_coding MGP_BALBcJ_T0061598.1 MGP_BALBcJ_G0027373.1 mouse_genomes_project 3 85803754 85804593 - Rab25 protein_coding retained_intron MGP_BALBcJ_T0061599.1 MGP_BALBcJ_G0027373.1 mouse_genomes_project 3 85805720 85809370 - Rab25 protein_coding retained_intron MGP_BALBcJ_T0064436.1 MGP_BALBcJ_G0027982.1 mouse_genomes_project 3 155620850 155704002 + MGP_BALBcJ_P0064436 Ptger3 protein_coding protein_coding MGP_BALBcJ_T0064437.1 MGP_BALBcJ_G0027982.1 mouse_genomes_project 3 155620858 155665061 + Ptger3 protein_coding retained_intron MGP_BALBcJ_T0064438.1 MGP_BALBcJ_G0027982.1 mouse_genomes_project 3 155620858 155702870 + MGP_BALBcJ_P0064438 Ptger3 protein_coding protein_coding MGP_BALBcJ_T0014233.1 MGP_BALBcJ_G0012330.1 mouse_genomes_project 3 108164742 108165385 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061732.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86391980 86393514 + MGP_BALBcJ_P0061732 Fam189b protein_coding protein_coding MGP_BALBcJ_T0061733.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86392040 86399019 + MGP_BALBcJ_P0061733 Fam189b protein_coding protein_coding MGP_BALBcJ_T0061734.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86392041 86399017 + MGP_BALBcJ_P0061734 Fam189b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061735.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86392417 86399018 + MGP_BALBcJ_P0061735 Fam189b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061736.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86392470 86399016 + MGP_BALBcJ_P0061736 Fam189b protein_coding protein_coding MGP_BALBcJ_T0061737.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86392478 86399023 + MGP_BALBcJ_P0061737 Fam189b protein_coding protein_coding MGP_BALBcJ_T0061738.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86392561 86399022 + MGP_BALBcJ_P0061738 Fam189b protein_coding unknown_likely_coding MGP_BALBcJ_T0061739.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86393066 86394604 + Fam189b protein_coding retained_intron MGP_BALBcJ_T0061740.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86397103 86398205 + Fam189b protein_coding retained_intron MGP_BALBcJ_T0061741.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86397661 86398204 + Fam189b protein_coding retained_intron MGP_BALBcJ_T0061742.1 MGP_BALBcJ_G0027393.1 mouse_genomes_project 3 86397711 86398508 + Fam189b protein_coding processed_transcript MGP_BALBcJ_T0001339.1 MGP_BALBcJ_G0001261.1 mouse_genomes_project 3 127260318 127261420 + TEC TEC MGP_BALBcJ_T0010540.1 MGP_BALBcJ_G0008665.1 mouse_genomes_project 3 132098139 132098218 - Mir1895 miRNA miRNA MGP_BALBcJ_T0013909.1 MGP_BALBcJ_G0012006.1 mouse_genomes_project 3 11270654 11277168 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007455.1 MGP_BALBcJ_G0006104.1 mouse_genomes_project 3 18907780 18909511 - Gm43672 lincRNA lincRNA MGP_BALBcJ_T0062070.1 MGP_BALBcJ_G0027457.1 mouse_genomes_project 3 89324179 89341130 + MGP_BALBcJ_P0062070 Pglyrp3 protein_coding protein_coding MGP_BALBcJ_T0001356.1 MGP_BALBcJ_G0001278.1 mouse_genomes_project 3 133305570 133308266 - TEC TEC MGP_BALBcJ_T0001351.1 MGP_BALBcJ_G0001273.1 mouse_genomes_project 3 130598877 130600844 + TEC TEC MGP_BALBcJ_T0010504.1 MGP_BALBcJ_G0008629.1 mouse_genomes_project 3 82668968 82669086 + Mir466k miRNA miRNA MGP_BALBcJ_T0062065.1 MGP_BALBcJ_G0027454.1 mouse_genomes_project 3 87981921 87996495 + MGP_BALBcJ_P0062065 Pglyrp4 protein_coding protein_coding MGP_BALBcJ_T0062066.1 MGP_BALBcJ_G0027454.1 mouse_genomes_project 3 87981926 87995491 + MGP_BALBcJ_P0062066 Pglyrp4 protein_coding protein_coding MGP_BALBcJ_T0062067.1 MGP_BALBcJ_G0027454.1 mouse_genomes_project 3 87993192 87996493 + Pglyrp4 protein_coding processed_transcript MGP_BALBcJ_T0101040.1 MGP_BALBcJ_G0039076.1 mouse_genomes_project 3 64637573 64637705 - Gm25919 snoRNA snoRNA MGP_BALBcJ_T0001285.1 MGP_BALBcJ_G0001208.1 mouse_genomes_project 3 108398249 108400783 + TEC TEC MGP_BALBcJ_T0060409.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30823255 30872823 + MGP_BALBcJ_P0060409 Fxr1 protein_coding protein_coding MGP_BALBcJ_T0060410.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30823449 30872852 + MGP_BALBcJ_P0060410 Fxr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060411.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30823456 30872826 + MGP_BALBcJ_P0060411 Fxr1 protein_coding protein_coding MGP_BALBcJ_T0060412.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30823459 30873803 + MGP_BALBcJ_P0060412 Fxr1 protein_coding protein_coding MGP_BALBcJ_T0060413.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30823459 30872826 + MGP_BALBcJ_P0060413 Fxr1 protein_coding protein_coding MGP_BALBcJ_T0060414.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30823464 30867809 + MGP_BALBcJ_P0060414 Fxr1 protein_coding protein_coding MGP_BALBcJ_T0060415.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30843018 30845152 + Fxr1 protein_coding retained_intron MGP_BALBcJ_T0060416.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30843021 30850021 + MGP_BALBcJ_P0060416 Fxr1 protein_coding protein_coding MGP_BALBcJ_T0060417.1 MGP_BALBcJ_G0027120.1 mouse_genomes_project 3 30850115 30852599 + Fxr1 protein_coding retained_intron MGP_BALBcJ_T0064439.1 MGP_BALBcJ_G0027983.1 mouse_genomes_project 3 155947324 155977690 - MGP_BALBcJ_P0064439 Cth protein_coding protein_coding MGP_BALBcJ_T0064440.1 MGP_BALBcJ_G0027983.1 mouse_genomes_project 3 155947499 155950789 - Cth protein_coding processed_transcript MGP_BALBcJ_T0064441.1 MGP_BALBcJ_G0027983.1 mouse_genomes_project 3 155950378 155958771 - Cth protein_coding retained_intron MGP_BALBcJ_T0064442.1 MGP_BALBcJ_G0027983.1 mouse_genomes_project 3 155972281 155977664 - Cth protein_coding retained_intron MGP_BALBcJ_T0017959.1 MGP_BALBcJ_G0015460.1 mouse_genomes_project 3 116323282 116326900 + Gm26871 processed_transcript lincRNA MGP_BALBcJ_T0017960.1 MGP_BALBcJ_G0015460.1 mouse_genomes_project 3 116326737 116410899 + Gm26871 processed_transcript lincRNA MGP_BALBcJ_T0017961.1 MGP_BALBcJ_G0015460.1 mouse_genomes_project 3 116326862 116412983 + Gm26871 processed_transcript lincRNA MGP_BALBcJ_T0017962.1 MGP_BALBcJ_G0015460.1 mouse_genomes_project 3 116326873 116368895 + Gm26871 processed_transcript lincRNA MGP_BALBcJ_T0017963.1 MGP_BALBcJ_G0015460.1 mouse_genomes_project 3 116326906 116426079 + Gm26871 processed_transcript lincRNA MGP_BALBcJ_T0017964.1 MGP_BALBcJ_G0015460.1 mouse_genomes_project 3 116353335 116356371 + Gm26871 processed_transcript retained_intron MGP_BALBcJ_T0007486.1 MGP_BALBcJ_G0006132.1 mouse_genomes_project 3 34801710 34893812 + lincRNA lincRNA MGP_BALBcJ_T0061010.1 MGP_BALBcJ_G0027240.1 mouse_genomes_project 3 61057806 61082240 - MGP_BALBcJ_P0061010 Vmn2r2 protein_coding protein_coding MGP_BALBcJ_T0061011.1 MGP_BALBcJ_G0027240.1 mouse_genomes_project 3 61057806 61085366 - MGP_BALBcJ_P0061011 Vmn2r2 protein_coding protein_coding MGP_BALBcJ_T0062970.1 MGP_BALBcJ_G0027696.1 mouse_genomes_project 3 103679455 103696858 - MGP_BALBcJ_P0062970 Atp5f1 protein_coding protein_coding MGP_BALBcJ_T0062971.1 MGP_BALBcJ_G0027696.1 mouse_genomes_project 3 103679459 103696035 - MGP_BALBcJ_P0062971 Atp5f1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062972.1 MGP_BALBcJ_G0027696.1 mouse_genomes_project 3 103679655 103690940 - MGP_BALBcJ_P0062972 Atp5f1 protein_coding protein_coding MGP_BALBcJ_T0062973.1 MGP_BALBcJ_G0027696.1 mouse_genomes_project 3 103690427 103696023 - Atp5f1 protein_coding retained_intron MGP_BALBcJ_T0062974.1 MGP_BALBcJ_G0027696.1 mouse_genomes_project 3 103690585 103692765 - Atp5f1 protein_coding retained_intron MGP_BALBcJ_T0062975.1 MGP_BALBcJ_G0027696.1 mouse_genomes_project 3 103695349 103696005 - Atp5f1 protein_coding retained_intron MGP_BALBcJ_T0102475.1 MGP_BALBcJ_G0040291.1 mouse_genomes_project 3 87366634 87366925 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014270.1 MGP_BALBcJ_G0012367.1 mouse_genomes_project 3 120078638 120080144 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099793.1 MGP_BALBcJ_G0037829.1 mouse_genomes_project 3 130773516 130773623 + Gm23196 snRNA snRNA MGP_BALBcJ_T0062134.1 MGP_BALBcJ_G0027508.1 mouse_genomes_project 3 90775365 90779648 + MGP_BALBcJ_P0062134 Tchh protein_coding protein_coding MGP_BALBcJ_T0001185.1 MGP_BALBcJ_G0001110.1 mouse_genomes_project 3 48465481 48466023 + TEC TEC MGP_BALBcJ_T0014349.1 MGP_BALBcJ_G0012446.1 mouse_genomes_project 3 145158133 145158582 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102490.1 MGP_BALBcJ_G0040306.1 mouse_genomes_project 3 103914087 103915431 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014051.1 MGP_BALBcJ_G0012148.1 mouse_genomes_project 3 57667807 57667965 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007698.1 MGP_BALBcJ_G0006295.1 mouse_genomes_project 3 135858564 135873867 + Gm19708 lincRNA lincRNA MGP_BALBcJ_T0062136.1 MGP_BALBcJ_G0027510.1 mouse_genomes_project 3 90852605 90858155 + MGP_BALBcJ_P0062136 S100a11 protein_coding protein_coding MGP_BALBcJ_T0063095.1 MGP_BALBcJ_G0027730.1 mouse_genomes_project 3 105672053 105677535 - MGP_BALBcJ_P0063095 Gstm7 protein_coding protein_coding MGP_BALBcJ_T0063096.1 MGP_BALBcJ_G0027730.1 mouse_genomes_project 3 105672426 105677385 - MGP_BALBcJ_P0063096 Gstm7 protein_coding protein_coding MGP_BALBcJ_T0063097.1 MGP_BALBcJ_G0027730.1 mouse_genomes_project 3 105672529 105677332 - MGP_BALBcJ_P0063097 Gstm7 protein_coding protein_coding MGP_BALBcJ_T0063098.1 MGP_BALBcJ_G0027730.1 mouse_genomes_project 3 105674782 105677297 - MGP_BALBcJ_P0063098 Gstm7 protein_coding protein_coding MGP_BALBcJ_T0063099.1 MGP_BALBcJ_G0027730.1 mouse_genomes_project 3 105674851 105677328 - MGP_BALBcJ_P0063099 Gstm7 protein_coding protein_coding MGP_BALBcJ_T0101035.1 MGP_BALBcJ_G0039071.1 mouse_genomes_project 3 52866534 52866666 - Gm22784 snoRNA snoRNA MGP_BALBcJ_T0062159.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91818325 91820581 - protein_coding retained_intron MGP_BALBcJ_T0062160.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91819082 91822533 - MGP_BALBcJ_P0062160 protein_coding protein_coding MGP_BALBcJ_T0062161.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91819303 91829712 - MGP_BALBcJ_P0062161 protein_coding protein_coding MGP_BALBcJ_T0062162.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91819303 91829630 - MGP_BALBcJ_P0062162 protein_coding protein_coding MGP_BALBcJ_T0062163.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91819303 91821030 - MGP_BALBcJ_P0062163 protein_coding protein_coding MGP_BALBcJ_T0062164.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91819303 91822484 - MGP_BALBcJ_P0062164 protein_coding protein_coding MGP_BALBcJ_T0062165.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91819303 91822554 - MGP_BALBcJ_P0062165 protein_coding protein_coding MGP_BALBcJ_T0062166.1 MGP_BALBcJ_G0027520.1 mouse_genomes_project 3 91821028 91822680 - protein_coding retained_intron MGP_BALBcJ_T0101070.1 MGP_BALBcJ_G0039106.1 mouse_genomes_project 3 113256965 113257097 + Gm22337 snoRNA snoRNA MGP_BALBcJ_T0007757.1 MGP_BALBcJ_G0006340.1 mouse_genomes_project 3 154088424 154094115 - Gm42947 lincRNA lincRNA MGP_BALBcJ_T0062465.1 MGP_BALBcJ_G0027571.1 mouse_genomes_project 3 93432402 93439300 - MGP_BALBcJ_P0062465 Car14 protein_coding protein_coding MGP_BALBcJ_T0062466.1 MGP_BALBcJ_G0027571.1 mouse_genomes_project 3 93434374 93439294 - MGP_BALBcJ_P0062466 Car14 protein_coding protein_coding MGP_BALBcJ_T0062467.1 MGP_BALBcJ_G0027571.1 mouse_genomes_project 3 93436146 93439293 - Car14 protein_coding retained_intron MGP_BALBcJ_T0062468.1 MGP_BALBcJ_G0027571.1 mouse_genomes_project 3 93436527 93438357 - Car14 protein_coding retained_intron MGP_BALBcJ_T0010491.1 MGP_BALBcJ_G0008616.1 mouse_genomes_project 3 32178417 32178509 + Gm25442 miRNA miRNA MGP_BALBcJ_T0013874.1 MGP_BALBcJ_G0011971.1 mouse_genomes_project 3 1726965 1727931 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062998.1 MGP_BALBcJ_G0027705.1 mouse_genomes_project 3 104215860 104222053 + Dennd2d protein_coding processed_transcript MGP_BALBcJ_T0062999.1 MGP_BALBcJ_G0027705.1 mouse_genomes_project 3 104215886 104236908 + MGP_BALBcJ_P0062999 Dennd2d protein_coding protein_coding MGP_BALBcJ_T0063000.1 MGP_BALBcJ_G0027705.1 mouse_genomes_project 3 104215905 104222071 + MGP_BALBcJ_P0063000 Dennd2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063001.1 MGP_BALBcJ_G0027705.1 mouse_genomes_project 3 104219515 104234478 + MGP_BALBcJ_P0063001 Dennd2d protein_coding protein_coding MGP_BALBcJ_T0063002.1 MGP_BALBcJ_G0027705.1 mouse_genomes_project 3 104220883 104222107 + Dennd2d protein_coding retained_intron MGP_BALBcJ_T0063003.1 MGP_BALBcJ_G0027705.1 mouse_genomes_project 3 104226638 104228759 + Dennd2d protein_coding retained_intron MGP_BALBcJ_T0064054.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140644262 140732881 - MGP_BALBcJ_P0064054 Pkn2 protein_coding protein_coding MGP_BALBcJ_T0064055.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140647071 140732792 - MGP_BALBcJ_P0064055 Pkn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064056.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140647173 140732535 - MGP_BALBcJ_P0064056 Pkn2 protein_coding protein_coding MGP_BALBcJ_T0064057.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140647173 140732535 - MGP_BALBcJ_P0064057 Pkn2 protein_coding protein_coding MGP_BALBcJ_T0064058.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140653324 140732797 - Pkn2 protein_coding processed_transcript MGP_BALBcJ_T0064059.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140653406 140656474 - Pkn2 protein_coding retained_intron MGP_BALBcJ_T0064060.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140658004 140732867 - Pkn2 protein_coding processed_transcript MGP_BALBcJ_T0064061.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140662760 140674717 - MGP_BALBcJ_P0064061 Pkn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064062.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140663877 140665701 - Pkn2 protein_coding retained_intron MGP_BALBcJ_T0064063.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140664671 140682408 - MGP_BALBcJ_P0064063 Pkn2 protein_coding protein_coding MGP_BALBcJ_T0064064.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140674427 140682371 - Pkn2 protein_coding retained_intron MGP_BALBcJ_T0064065.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140683348 140732860 - Pkn2 protein_coding retained_intron MGP_BALBcJ_T0064066.1 MGP_BALBcJ_G0027917.1 mouse_genomes_project 3 140703830 140706623 - Pkn2 protein_coding retained_intron MGP_BALBcJ_T0001114.1 MGP_BALBcJ_G0001039.1 mouse_genomes_project 3 17686336 17690405 + TEC TEC MGP_BALBcJ_T0007653.1 MGP_BALBcJ_G0006257.1 mouse_genomes_project 3 119528781 119537328 - A730020M07Rik lincRNA lincRNA MGP_BALBcJ_T0007654.1 MGP_BALBcJ_G0006257.1 mouse_genomes_project 3 119530971 119537331 - A730020M07Rik lincRNA lincRNA MGP_BALBcJ_T0007655.1 MGP_BALBcJ_G0006257.1 mouse_genomes_project 3 119530973 119537213 - A730020M07Rik lincRNA lincRNA MGP_BALBcJ_T0013962.1 MGP_BALBcJ_G0012059.1 mouse_genomes_project 3 32860242 32860563 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007447.1 MGP_BALBcJ_G0006097.1 mouse_genomes_project 3 15225632 15348081 - lincRNA lincRNA MGP_BALBcJ_T0001131.1 MGP_BALBcJ_G0001056.1 mouse_genomes_project 3 29563573 29563886 - TEC TEC MGP_BALBcJ_T0004185.1 MGP_BALBcJ_G0003690.1 mouse_genomes_project 3 16118910 16132535 + Gm16093 antisense antisense MGP_BALBcJ_T0060105.1 MGP_BALBcJ_G0027066.1 mouse_genomes_project 3 16493146 16512690 - MGP_BALBcJ_P0060105 1700064H15Rik protein_coding protein_coding MGP_BALBcJ_T0001246.1 MGP_BALBcJ_G0001169.1 mouse_genomes_project 3 77272047 77274372 + TEC TEC MGP_BALBcJ_T0060540.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34299687 34314328 - MGP_BALBcJ_P0060540 Nudt6 protein_coding protein_coding MGP_BALBcJ_T0060541.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34299755 34314318 - MGP_BALBcJ_P0060541 Nudt6 protein_coding protein_coding MGP_BALBcJ_T0060542.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34299767 34314338 - MGP_BALBcJ_P0060542 Nudt6 protein_coding protein_coding MGP_BALBcJ_T0060543.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34299856 34305453 - Nudt6 protein_coding processed_transcript MGP_BALBcJ_T0060544.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34300133 34314321 - MGP_BALBcJ_P0060544 Nudt6 protein_coding protein_coding MGP_BALBcJ_T0060545.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34304285 34314305 - MGP_BALBcJ_P0060545 Nudt6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060546.1 MGP_BALBcJ_G0027143.1 mouse_genomes_project 3 34307148 34314314 - MGP_BALBcJ_P0060546 Nudt6 protein_coding protein_coding MGP_BALBcJ_T0013951.1 MGP_BALBcJ_G0012048.1 mouse_genomes_project 3 27654633 27654901 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062958.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103607394 103609145 + Tmigd3 protein_coding processed_transcript MGP_BALBcJ_T0062959.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103607398 103660954 + MGP_BALBcJ_P0062959 Tmigd3 protein_coding protein_coding MGP_BALBcJ_T0062960.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103607398 103660873 + MGP_BALBcJ_P0062960 Tmigd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062961.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103607468 103608354 + Tmigd3 protein_coding processed_transcript MGP_BALBcJ_T0062963.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103640688 103655375 + MGP_BALBcJ_P0062963 Tmigd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062965.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103650724 103660957 + MGP_BALBcJ_P0062965 Tmigd3 protein_coding protein_coding MGP_BALBcJ_T0062966.1 MGP_BALBcJ_G0027694.1 mouse_genomes_project 3 103650724 103660960 + MGP_BALBcJ_P0062966 Tmigd3 protein_coding protein_coding MGP_BALBcJ_T0004236.1 MGP_BALBcJ_G0003727.1 mouse_genomes_project 3 60900911 60906226 + Gm26850 antisense antisense MGP_BALBcJ_T0004237.1 MGP_BALBcJ_G0003727.1 mouse_genomes_project 3 60900913 60902729 + Gm26850 antisense antisense MGP_BALBcJ_T0014263.1 MGP_BALBcJ_G0012360.1 mouse_genomes_project 3 119067337 119068332 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004375.1 MGP_BALBcJ_G0003816.1 mouse_genomes_project 3 136130225 136156589 - Gm16559 antisense antisense MGP_BALBcJ_T0001381.1 MGP_BALBcJ_G0001303.1 mouse_genomes_project 3 151319599 151322975 - TEC TEC MGP_BALBcJ_T0007462.1 MGP_BALBcJ_G0006111.1 mouse_genomes_project 3 26588392 26707193 - Gm33206 lincRNA lincRNA MGP_BALBcJ_T0007454.1 MGP_BALBcJ_G0006103.1 mouse_genomes_project 3 18831302 18832087 - Gm43674 lincRNA lincRNA MGP_BALBcJ_T0102456.1 MGP_BALBcJ_G0040272.1 mouse_genomes_project 3 56339789 56340054 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098591.1 MGP_BALBcJ_G0036645.1 mouse_genomes_project 3 86111713 86111832 + n-R5s197 rRNA rRNA MGP_BALBcJ_T0001223.1 MGP_BALBcJ_G0001146.1 mouse_genomes_project 3 56518152 56524280 + TEC TEC MGP_BALBcJ_T0017981.1 MGP_BALBcJ_G0015467.1 mouse_genomes_project 3 146090711 146108473 + processed_transcript processed_transcript MGP_BALBcJ_T0013913.1 MGP_BALBcJ_G0012010.1 mouse_genomes_project 3 11846563 11847547 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014327.1 MGP_BALBcJ_G0012424.1 mouse_genomes_project 3 136990114 136990552 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014193.1 MGP_BALBcJ_G0012290.1 mouse_genomes_project 3 98082007 98083030 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099746.1 MGP_BALBcJ_G0037782.1 mouse_genomes_project 3 65629800 65629989 - Gm22073 snRNA snRNA MGP_BALBcJ_T0061287.1 MGP_BALBcJ_G0027306.1 mouse_genomes_project 3 80225267 80235043 - MGP_BALBcJ_P0061287 Fgb protein_coding protein_coding MGP_BALBcJ_T0060579.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572148 37589003 + MGP_BALBcJ_P0060579 Plk4 protein_coding protein_coding MGP_BALBcJ_T0060580.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572157 37580533 + Plk4 protein_coding retained_intron MGP_BALBcJ_T0060581.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572171 37573753 + Plk4 protein_coding retained_intron MGP_BALBcJ_T0060582.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572171 37588871 + MGP_BALBcJ_P0060582 Plk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060583.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572179 37578171 + Plk4 protein_coding retained_intron MGP_BALBcJ_T0060584.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572183 37589003 + MGP_BALBcJ_P0060584 Plk4 protein_coding protein_coding MGP_BALBcJ_T0060585.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572383 37588537 + MGP_BALBcJ_P0060585 Plk4 protein_coding protein_coding MGP_BALBcJ_T0060586.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37572910 37577119 + MGP_BALBcJ_P0060586 Plk4 protein_coding protein_coding MGP_BALBcJ_T0060587.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37573592 37574174 + Plk4 protein_coding retained_intron MGP_BALBcJ_T0060588.1 MGP_BALBcJ_G0027152.1 mouse_genomes_project 3 37584857 37589002 + MGP_BALBcJ_P0060588 Plk4 protein_coding protein_coding MGP_BALBcJ_T0001389.1 MGP_BALBcJ_G0001311.1 mouse_genomes_project 3 154784138 154785813 + TEC TEC MGP_BALBcJ_T0064406.1 MGP_BALBcJ_G0027976.1 mouse_genomes_project 3 152697771 152802222 + MGP_BALBcJ_P0064406 protein_coding protein_coding MGP_BALBcJ_T0064407.1 MGP_BALBcJ_G0027976.1 mouse_genomes_project 3 152744967 152783505 + MGP_BALBcJ_P0064407 protein_coding protein_coding MGP_BALBcJ_T0064408.1 MGP_BALBcJ_G0027976.1 mouse_genomes_project 3 152745714 152748143 + protein_coding processed_transcript MGP_BALBcJ_T0064409.1 MGP_BALBcJ_G0027976.1 mouse_genomes_project 3 152798753 152802219 + MGP_BALBcJ_P0064409 protein_coding protein_coding MGP_BALBcJ_T0064311.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150368376 150415923 + MGP_BALBcJ_P0064311 Usp33 protein_coding protein_coding MGP_BALBcJ_T0064312.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150368376 150416202 + MGP_BALBcJ_P0064312 Usp33 protein_coding protein_coding MGP_BALBcJ_T0064313.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150368387 150416207 + MGP_BALBcJ_P0064313 Usp33 protein_coding protein_coding MGP_BALBcJ_T0064314.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150368410 150394495 + MGP_BALBcJ_P0064314 Usp33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064315.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150368413 150380476 + Usp33 protein_coding retained_intron MGP_BALBcJ_T0064316.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150384043 150391081 + Usp33 protein_coding processed_transcript MGP_BALBcJ_T0064317.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150386495 150389746 + Usp33 protein_coding retained_intron MGP_BALBcJ_T0064318.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150388871 150396216 + Usp33 protein_coding retained_intron MGP_BALBcJ_T0064319.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150391019 150397586 + MGP_BALBcJ_P0064319 Usp33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064320.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150404639 150415097 + Usp33 protein_coding processed_transcript MGP_BALBcJ_T0064321.1 MGP_BALBcJ_G0027962.1 mouse_genomes_project 3 150405127 150406846 + Usp33 protein_coding retained_intron MGP_BALBcJ_T0063248.1 MGP_BALBcJ_G0027765.1 mouse_genomes_project 3 106898687 106939466 + MGP_BALBcJ_P0063248 Slc25a24 protein_coding protein_coding MGP_BALBcJ_T0063249.1 MGP_BALBcJ_G0027765.1 mouse_genomes_project 3 106898700 106929541 + MGP_BALBcJ_P0063249 Slc25a24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062838.1 MGP_BALBcJ_G0027667.1 mouse_genomes_project 3 101434647 101446648 - Olfml3 protein_coding processed_transcript MGP_BALBcJ_T0062839.1 MGP_BALBcJ_G0027667.1 mouse_genomes_project 3 101444071 101450415 - MGP_BALBcJ_P0062839 Olfml3 protein_coding protein_coding MGP_BALBcJ_T0062840.1 MGP_BALBcJ_G0027667.1 mouse_genomes_project 3 101444084 101444958 - MGP_BALBcJ_P0062840 Olfml3 protein_coding protein_coding MGP_BALBcJ_T0062841.1 MGP_BALBcJ_G0027667.1 mouse_genomes_project 3 101446118 101450382 - Olfml3 protein_coding retained_intron MGP_BALBcJ_T0017942.1 MGP_BALBcJ_G0015455.1 mouse_genomes_project 3 103696261 103721318 + Gm42890 processed_transcript retained_intron MGP_BALBcJ_T0017943.1 MGP_BALBcJ_G0015455.1 mouse_genomes_project 3 103702873 103713160 + Gm42890 processed_transcript retained_intron MGP_BALBcJ_T0014262.1 MGP_BALBcJ_G0012359.1 mouse_genomes_project 3 117875701 117876509 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062997.1 MGP_BALBcJ_G0027704.1 mouse_genomes_project 3 104109049 104127841 - MGP_BALBcJ_P0062997 Chil6 protein_coding protein_coding MGP_BALBcJ_T0014230.1 MGP_BALBcJ_G0012327.1 mouse_genomes_project 3 106967454 106968319 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062331.1 MGP_BALBcJ_G0027550.1 mouse_genomes_project 3 92773692 92802167 - MGP_BALBcJ_P0062331 Prune protein_coding protein_coding MGP_BALBcJ_T0062332.1 MGP_BALBcJ_G0027550.1 mouse_genomes_project 3 92784966 92788753 - Prune protein_coding retained_intron MGP_BALBcJ_T0098761.1 MGP_BALBcJ_G0036815.1 mouse_genomes_project 3 85955582 85955709 + Gm25820 scaRNA scaRNA MGP_BALBcJ_T0014340.1 MGP_BALBcJ_G0012437.1 mouse_genomes_project 3 142486907 142487469 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062661.1 MGP_BALBcJ_G0027630.1 mouse_genomes_project 3 96422796 96446340 - MGP_BALBcJ_P0062661 Hsd3b3 protein_coding protein_coding MGP_BALBcJ_T0062662.1 MGP_BALBcJ_G0027630.1 mouse_genomes_project 3 96422797 96434773 - MGP_BALBcJ_P0062662 Hsd3b3 protein_coding protein_coding MGP_BALBcJ_T0062663.1 MGP_BALBcJ_G0027630.1 mouse_genomes_project 3 96422797 96446266 - MGP_BALBcJ_P0062663 Hsd3b3 protein_coding protein_coding MGP_BALBcJ_T0062664.1 MGP_BALBcJ_G0027630.1 mouse_genomes_project 3 96422797 96434773 - MGP_BALBcJ_P0062664 Hsd3b3 protein_coding protein_coding MGP_BALBcJ_T0062665.1 MGP_BALBcJ_G0027630.1 mouse_genomes_project 3 96423709 96445023 - MGP_BALBcJ_P0062665 Hsd3b3 protein_coding protein_coding MGP_BALBcJ_T0062666.1 MGP_BALBcJ_G0027630.1 mouse_genomes_project 3 96440288 96446305 - Hsd3b3 protein_coding processed_transcript MGP_BALBcJ_T0064153.1 MGP_BALBcJ_G0027938.1 mouse_genomes_project 3 144061987 144070510 + MGP_BALBcJ_P0064153 Mcoln3 protein_coding protein_coding MGP_BALBcJ_T0064154.1 MGP_BALBcJ_G0027938.1 mouse_genomes_project 3 144066196 144087673 + MGP_BALBcJ_P0064154 Mcoln3 protein_coding protein_coding MGP_BALBcJ_T0064155.1 MGP_BALBcJ_G0027938.1 mouse_genomes_project 3 144084946 144086530 + Mcoln3 protein_coding retained_intron MGP_BALBcJ_T0014119.1 MGP_BALBcJ_G0012216.1 mouse_genomes_project 3 77223747 77224835 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063449.1 MGP_BALBcJ_G0027803.1 mouse_genomes_project 3 119615717 119627313 + MGP_BALBcJ_P0063449 F3 protein_coding protein_coding MGP_BALBcJ_T0063450.1 MGP_BALBcJ_G0027803.1 mouse_genomes_project 3 119615750 119621712 + F3 protein_coding processed_transcript MGP_BALBcJ_T0063451.1 MGP_BALBcJ_G0027803.1 mouse_genomes_project 3 119621499 119624446 + F3 protein_coding retained_intron MGP_BALBcJ_T0063452.1 MGP_BALBcJ_G0027803.1 mouse_genomes_project 3 119621723 119627313 + MGP_BALBcJ_P0063452 F3 protein_coding protein_coding MGP_BALBcJ_T0061169.1 MGP_BALBcJ_G0027279.1 mouse_genomes_project 3 72649439 72673782 - MGP_BALBcJ_P0061169 Pdcd10 protein_coding protein_coding MGP_BALBcJ_T0061170.1 MGP_BALBcJ_G0027279.1 mouse_genomes_project 3 72661415 72689086 - MGP_BALBcJ_P0061170 Pdcd10 protein_coding protein_coding MGP_BALBcJ_T0061171.1 MGP_BALBcJ_G0027279.1 mouse_genomes_project 3 72665921 72689164 - Pdcd10 protein_coding retained_intron MGP_BALBcJ_T0013893.1 MGP_BALBcJ_G0011990.1 mouse_genomes_project 3 7055609 7055741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063246.1 MGP_BALBcJ_G0027764.1 mouse_genomes_project 3 106850822 106891517 + MGP_BALBcJ_P0063246 Slc25a54 protein_coding protein_coding MGP_BALBcJ_T0063247.1 MGP_BALBcJ_G0027764.1 mouse_genomes_project 3 106850852 106891412 + MGP_BALBcJ_P0063247 Slc25a54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014289.1 MGP_BALBcJ_G0012386.1 mouse_genomes_project 3 127339122 127340165 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063296.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113760738 113791248 + MGP_BALBcJ_P0063296 Dph5 protein_coding protein_coding MGP_BALBcJ_T0063297.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113760753 113761380 + MGP_BALBcJ_P0063297 Dph5 protein_coding protein_coding MGP_BALBcJ_T0063298.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113761047 113773266 + MGP_BALBcJ_P0063298 Dph5 protein_coding protein_coding MGP_BALBcJ_T0063299.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113761065 113796911 + MGP_BALBcJ_P0063299 Dph5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063300.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113761073 113774632 + MGP_BALBcJ_P0063300 Dph5 protein_coding protein_coding MGP_BALBcJ_T0063301.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113761083 113791876 + MGP_BALBcJ_P0063301 Dph5 protein_coding protein_coding MGP_BALBcJ_T0063302.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113761094 113765175 + Dph5 protein_coding retained_intron MGP_BALBcJ_T0063303.1 MGP_BALBcJ_G0027774.1 mouse_genomes_project 3 113761095 113765890 + Dph5 protein_coding retained_intron MGP_BALBcJ_T0014292.1 MGP_BALBcJ_G0012389.1 mouse_genomes_project 3 128681526 128681824 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013882.1 MGP_BALBcJ_G0011979.1 mouse_genomes_project 3 4717545 4718130 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063433.1 MGP_BALBcJ_G0027799.1 mouse_genomes_project 3 119178974 119207217 + MGP_BALBcJ_P0063433 Alg14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063434.1 MGP_BALBcJ_G0027799.1 mouse_genomes_project 3 119179024 119251387 + MGP_BALBcJ_P0063434 Alg14 protein_coding protein_coding MGP_BALBcJ_T0063435.1 MGP_BALBcJ_G0027799.1 mouse_genomes_project 3 119179066 119207679 + MGP_BALBcJ_P0063435 Alg14 protein_coding protein_coding MGP_BALBcJ_T0007456.1 MGP_BALBcJ_G0006105.1 mouse_genomes_project 3 19120637 19133937 - Gm38324 lincRNA lincRNA MGP_BALBcJ_T0007745.1 MGP_BALBcJ_G0006332.1 mouse_genomes_project 3 149082975 149086423 + Gm43468 lincRNA lincRNA MGP_BALBcJ_T0062507.1 MGP_BALBcJ_G0027580.1 mouse_genomes_project 3 93761254 93761698 + MGP_BALBcJ_P0062507 Hist2h2ab protein_coding protein_coding MGP_BALBcJ_T0063355.1 MGP_BALBcJ_G0027785.1 mouse_genomes_project 3 114501967 114533550 - MGP_BALBcJ_P0063355 Mfsd14a protein_coding protein_coding MGP_BALBcJ_T0063356.1 MGP_BALBcJ_G0027785.1 mouse_genomes_project 3 114503404 114507292 - Mfsd14a protein_coding retained_intron MGP_BALBcJ_T0063357.1 MGP_BALBcJ_G0027785.1 mouse_genomes_project 3 114512162 114516600 - Mfsd14a protein_coding retained_intron MGP_BALBcJ_T0063359.1 MGP_BALBcJ_G0027785.1 mouse_genomes_project 3 114518986 114533364 - Mfsd14a protein_coding retained_intron MGP_BALBcJ_T0063360.1 MGP_BALBcJ_G0027785.1 mouse_genomes_project 3 114521746 114533483 - Mfsd14a protein_coding retained_intron MGP_BALBcJ_T0060125.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16875641 16916214 - MGP_BALBcJ_P0060125 Hps3 protein_coding protein_coding MGP_BALBcJ_T0060126.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16875647 16916179 - Hps3 protein_coding retained_intron MGP_BALBcJ_T0060127.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16877400 16895050 - Hps3 protein_coding processed_transcript MGP_BALBcJ_T0060128.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16877403 16916201 - MGP_BALBcJ_P0060128 Hps3 protein_coding protein_coding MGP_BALBcJ_T0060129.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16883560 16893856 - Hps3 protein_coding processed_transcript MGP_BALBcJ_T0060130.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16892153 16916201 - Hps3 protein_coding retained_intron MGP_BALBcJ_T0060131.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16893448 16916193 - Hps3 protein_coding retained_intron MGP_BALBcJ_T0060132.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16895875 16916201 - Hps3 protein_coding retained_intron MGP_BALBcJ_T0060133.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16896146 16916195 - Hps3 protein_coding processed_transcript MGP_BALBcJ_T0060134.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16897289 16916193 - Hps3 protein_coding retained_intron MGP_BALBcJ_T0060135.1 MGP_BALBcJ_G0027070.1 mouse_genomes_project 3 16915726 16916201 - Hps3 protein_coding processed_transcript MGP_BALBcJ_T0063257.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107557092 107914297 - MGP_BALBcJ_P0063257 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063258.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107557095 107915149 - MGP_BALBcJ_P0063258 Ntng1 protein_coding unknown_likely_coding MGP_BALBcJ_T0063259.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107557098 107915304 - MGP_BALBcJ_P0063259 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063260.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107558167 107914768 - MGP_BALBcJ_P0063260 Ntng1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063261.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107559734 107906824 - MGP_BALBcJ_P0063261 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063262.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107559734 107906824 - MGP_BALBcJ_P0063262 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063263.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107559734 107906824 - MGP_BALBcJ_P0063263 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063264.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107559734 107906824 - MGP_BALBcJ_P0063264 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063265.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107559734 107906824 - MGP_BALBcJ_P0063265 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063266.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107559734 107906824 - MGP_BALBcJ_P0063266 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0063267.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107613116 107615418 - Ntng1 protein_coding retained_intron MGP_BALBcJ_T0063268.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107613116 107906784 - Ntng1 protein_coding retained_intron MGP_BALBcJ_T0063269.1 MGP_BALBcJ_G0027767.1 mouse_genomes_project 3 107914977 107915304 - MGP_BALBcJ_P0063269 Ntng1 protein_coding protein_coding MGP_BALBcJ_T0061298.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81081394 81223143 - MGP_BALBcJ_P0061298 D930015E06Rik protein_coding protein_coding MGP_BALBcJ_T0061299.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81081948 81223105 - MGP_BALBcJ_P0061299 D930015E06Rik protein_coding protein_coding MGP_BALBcJ_T0061300.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81081948 81223143 - MGP_BALBcJ_P0061300 D930015E06Rik protein_coding protein_coding MGP_BALBcJ_T0061301.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81081949 81092958 - D930015E06Rik protein_coding processed_transcript MGP_BALBcJ_T0061302.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81084071 81091319 - D930015E06Rik protein_coding retained_intron MGP_BALBcJ_T0061303.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81084085 81093284 - D930015E06Rik protein_coding retained_intron MGP_BALBcJ_T0061304.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81105106 81150946 - D930015E06Rik protein_coding processed_transcript MGP_BALBcJ_T0061305.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81123317 81126530 - D930015E06Rik protein_coding processed_transcript MGP_BALBcJ_T0061306.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81213280 81223096 - D930015E06Rik protein_coding retained_intron MGP_BALBcJ_T0061307.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81220141 81223129 - D930015E06Rik protein_coding retained_intron MGP_BALBcJ_T0061308.1 MGP_BALBcJ_G0027311.1 mouse_genomes_project 3 81220342 81223102 - D930015E06Rik protein_coding retained_intron MGP_BALBcJ_T0001115.1 MGP_BALBcJ_G0001040.1 mouse_genomes_project 3 19656020 19656271 + TEC TEC MGP_BALBcJ_T0064189.1 MGP_BALBcJ_G0027947.1 mouse_genomes_project 3 144537100 144571609 - MGP_BALBcJ_P0064189 Dnase2b protein_coding protein_coding MGP_BALBcJ_T0064190.1 MGP_BALBcJ_G0027947.1 mouse_genomes_project 3 144537100 144552616 - MGP_BALBcJ_P0064190 Dnase2b protein_coding protein_coding MGP_BALBcJ_T0014291.1 MGP_BALBcJ_G0012388.1 mouse_genomes_project 3 128064362 128064955 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061946.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87310941 87330671 + MGP_BALBcJ_P0061946 Tpm3 protein_coding protein_coding MGP_BALBcJ_T0061947.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87318397 87328141 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061948.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87318397 87326424 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061949.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87318447 87337304 + MGP_BALBcJ_P0061949 Tpm3 protein_coding protein_coding MGP_BALBcJ_T0061950.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87318464 87339425 + MGP_BALBcJ_P0061950 Tpm3 protein_coding protein_coding MGP_BALBcJ_T0061951.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87324917 87326094 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061952.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87325855 87328352 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061953.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87325985 87326462 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061954.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87326002 87327114 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061955.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87326607 87328587 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061956.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87328175 87329013 + Tpm3 protein_coding retained_intron MGP_BALBcJ_T0061957.1 MGP_BALBcJ_G0027426.1 mouse_genomes_project 3 87328603 87337304 + Tpm3 protein_coding processed_transcript MGP_BALBcJ_T0004215.1 MGP_BALBcJ_G0003709.1 mouse_genomes_project 3 35767712 35781461 - C230034O21Rik antisense antisense MGP_BALBcJ_T0064252.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150121780 150136738 - Gipc2 protein_coding processed_transcript MGP_BALBcJ_T0064253.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150122086 150195973 - MGP_BALBcJ_P0064253 Gipc2 protein_coding protein_coding MGP_BALBcJ_T0064254.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150122088 150135257 - Gipc2 protein_coding processed_transcript MGP_BALBcJ_T0064255.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150122129 150134805 - Gipc2 protein_coding processed_transcript MGP_BALBcJ_T0064256.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150122266 150131079 - Gipc2 protein_coding retained_intron MGP_BALBcJ_T0064257.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150122441 150175838 - Gipc2 protein_coding processed_transcript MGP_BALBcJ_T0064258.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150130098 150136552 - Gipc2 protein_coding retained_intron MGP_BALBcJ_T0064259.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150157198 150166874 - Gipc2 protein_coding retained_intron MGP_BALBcJ_T0064260.1 MGP_BALBcJ_G0027957.1 mouse_genomes_project 3 150159704 150195493 - Gipc2 protein_coding processed_transcript MGP_BALBcJ_T0060860.1 MGP_BALBcJ_G0027203.1 mouse_genomes_project 3 54519493 54526911 - MGP_BALBcJ_P0060860 Commd2 protein_coding protein_coding MGP_BALBcJ_T0060861.1 MGP_BALBcJ_G0027203.1 mouse_genomes_project 3 54521503 54526904 - MGP_BALBcJ_P0060861 Commd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060862.1 MGP_BALBcJ_G0027203.1 mouse_genomes_project 3 54526297 54526911 - Commd2 protein_coding retained_intron MGP_BALBcJ_T0060055.1 MGP_BALBcJ_G0027051.1 mouse_genomes_project 3 11739278 11741358 + Car3 protein_coding retained_intron MGP_BALBcJ_T0060056.1 MGP_BALBcJ_G0027051.1 mouse_genomes_project 3 11739304 11748347 + MGP_BALBcJ_P0060056 Car3 protein_coding protein_coding MGP_BALBcJ_T0060057.1 MGP_BALBcJ_G0027051.1 mouse_genomes_project 3 11744986 11747895 + Car3 protein_coding retained_intron MGP_BALBcJ_T0061876.1 MGP_BALBcJ_G0027418.1 mouse_genomes_project 3 86973320 86991792 - MGP_BALBcJ_P0061876 Chrnb2 protein_coding protein_coding MGP_BALBcJ_T0061877.1 MGP_BALBcJ_G0027418.1 mouse_genomes_project 3 86979615 86990585 - Chrnb2 protein_coding processed_transcript MGP_BALBcJ_T0061878.1 MGP_BALBcJ_G0027418.1 mouse_genomes_project 3 86979615 86991816 - MGP_BALBcJ_P0061878 Chrnb2 protein_coding protein_coding MGP_BALBcJ_T0011514.1 MGP_BALBcJ_G0009639.1 mouse_genomes_project 3 31365640 31365854 + Gm27403 misc_RNA misc_RNA MGP_BALBcJ_T0061645.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85943581 85974536 + MGP_BALBcJ_P0061645 2810403A07Rik protein_coding protein_coding MGP_BALBcJ_T0061646.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85943592 85945841 + 2810403A07Rik protein_coding retained_intron MGP_BALBcJ_T0061647.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85943605 85974466 + MGP_BALBcJ_P0061647 2810403A07Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061648.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85943605 85974174 + MGP_BALBcJ_P0061648 2810403A07Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061649.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85943611 85963228 + 2810403A07Rik protein_coding retained_intron MGP_BALBcJ_T0061650.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85943615 85973615 + MGP_BALBcJ_P0061650 2810403A07Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061651.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85955088 85970514 + 2810403A07Rik protein_coding processed_transcript MGP_BALBcJ_T0061652.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85960449 85962527 + 2810403A07Rik protein_coding retained_intron MGP_BALBcJ_T0061653.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85961250 85970593 + 2810403A07Rik protein_coding retained_intron MGP_BALBcJ_T0061654.1 MGP_BALBcJ_G0027379.1 mouse_genomes_project 3 85970385 85972696 + 2810403A07Rik protein_coding processed_transcript MGP_BALBcJ_T0062805.1 MGP_BALBcJ_G0027662.1 mouse_genomes_project 3 100775787 100802481 + MGP_BALBcJ_P0062805 Ampd1 protein_coding protein_coding MGP_BALBcJ_T0062806.1 MGP_BALBcJ_G0027662.1 mouse_genomes_project 3 100775795 100802475 + MGP_BALBcJ_P0062806 Ampd1 protein_coding protein_coding MGP_BALBcJ_T0062807.1 MGP_BALBcJ_G0027662.1 mouse_genomes_project 3 100775826 100790001 + MGP_BALBcJ_P0062807 Ampd1 protein_coding protein_coding MGP_BALBcJ_T0062808.1 MGP_BALBcJ_G0027662.1 mouse_genomes_project 3 100795428 100796456 + Ampd1 protein_coding retained_intron MGP_BALBcJ_T0062809.1 MGP_BALBcJ_G0027662.1 mouse_genomes_project 3 100796099 100802467 + MGP_BALBcJ_P0062809 Ampd1 protein_coding protein_coding MGP_BALBcJ_T0060518.1 MGP_BALBcJ_G0027137.1 mouse_genomes_project 3 33964518 34012805 + MGP_BALBcJ_P0060518 Adad1 protein_coding protein_coding MGP_BALBcJ_T0060519.1 MGP_BALBcJ_G0027137.1 mouse_genomes_project 3 33964622 34011805 + MGP_BALBcJ_P0060519 Adad1 protein_coding protein_coding MGP_BALBcJ_T0060520.1 MGP_BALBcJ_G0027137.1 mouse_genomes_project 3 33964669 33968348 + Adad1 protein_coding retained_intron MGP_BALBcJ_T0060521.1 MGP_BALBcJ_G0027137.1 mouse_genomes_project 3 33985944 33993121 + Adad1 protein_coding retained_intron MGP_BALBcJ_T0060522.1 MGP_BALBcJ_G0027137.1 mouse_genomes_project 3 33986081 34022097 + MGP_BALBcJ_P0060522 Adad1 protein_coding protein_coding MGP_BALBcJ_T0061958.1 MGP_BALBcJ_G0027427.1 mouse_genomes_project 3 87344001 87453298 + MGP_BALBcJ_P0061958 Nup210l protein_coding protein_coding MGP_BALBcJ_T0061959.1 MGP_BALBcJ_G0027427.1 mouse_genomes_project 3 87344003 87453329 + MGP_BALBcJ_P0061959 Nup210l protein_coding protein_coding MGP_BALBcJ_T0062980.1 MGP_BALBcJ_G0027698.1 mouse_genomes_project 3 103710469 103724095 + MGP_BALBcJ_P0062980 Ovgp1 protein_coding protein_coding MGP_BALBcJ_T0062981.1 MGP_BALBcJ_G0027698.1 mouse_genomes_project 3 103710841 103722829 + MGP_BALBcJ_P0062981 Ovgp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062982.1 MGP_BALBcJ_G0027698.1 mouse_genomes_project 3 103714039 103716929 + Ovgp1 protein_coding retained_intron MGP_BALBcJ_T0062983.1 MGP_BALBcJ_G0027698.1 mouse_genomes_project 3 103716904 103721533 + Ovgp1 protein_coding processed_transcript MGP_BALBcJ_T0061132.1 MGP_BALBcJ_G0027268.1 mouse_genomes_project 3 66390488 66645678 + MGP_BALBcJ_P0061132 Ppm1l protein_coding protein_coding MGP_BALBcJ_T0061133.1 MGP_BALBcJ_G0027268.1 mouse_genomes_project 3 66581417 66582179 + Ppm1l protein_coding retained_intron MGP_BALBcJ_T0061134.1 MGP_BALBcJ_G0027268.1 mouse_genomes_project 3 66627096 66637788 + Ppm1l protein_coding processed_transcript MGP_BALBcJ_T0061135.1 MGP_BALBcJ_G0027268.1 mouse_genomes_project 3 66633869 66637969 + Ppm1l protein_coding retained_intron MGP_BALBcJ_T0062358.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92843352 92876022 - protein_coding retained_intron MGP_BALBcJ_T0062359.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92843352 92876023 - MGP_BALBcJ_P0062359 protein_coding protein_coding MGP_BALBcJ_T0062360.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92843352 92876069 - MGP_BALBcJ_P0062360 protein_coding protein_coding MGP_BALBcJ_T0062361.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92843352 92876067 - MGP_BALBcJ_P0062361 protein_coding protein_coding MGP_BALBcJ_T0062362.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92858075 92931735 - MGP_BALBcJ_P0062362 protein_coding unknown_likely_coding MGP_BALBcJ_T0062363.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92858878 92876023 - protein_coding retained_intron MGP_BALBcJ_T0062364.1 MGP_BALBcJ_G0027554.1 mouse_genomes_project 3 92874450 92875956 - protein_coding retained_intron MGP_BALBcJ_T0013889.1 MGP_BALBcJ_G0011986.1 mouse_genomes_project 3 5896252 5896697 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064161.1 MGP_BALBcJ_G0027940.1 mouse_genomes_project 3 144176024 144242431 + MGP_BALBcJ_P0064161 Lpar3 protein_coding protein_coding MGP_BALBcJ_T0013959.1 MGP_BALBcJ_G0012056.1 mouse_genomes_project 3 32414210 32415129 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014339.1 MGP_BALBcJ_G0012436.1 mouse_genomes_project 3 142290253 142291124 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062045.1 MGP_BALBcJ_G0027445.1 mouse_genomes_project 3 87813311 87838088 + S100a3 protein_coding processed_transcript MGP_BALBcJ_T0062046.1 MGP_BALBcJ_G0027445.1 mouse_genomes_project 3 87837421 87855716 + MGP_BALBcJ_P0062046 S100a3 protein_coding protein_coding MGP_BALBcJ_T0062047.1 MGP_BALBcJ_G0027445.1 mouse_genomes_project 3 87839714 87855762 + MGP_BALBcJ_P0062047 S100a3 protein_coding protein_coding MGP_BALBcJ_T0062049.1 MGP_BALBcJ_G0027445.1 mouse_genomes_project 3 87853455 87855940 + MGP_BALBcJ_P0062049 S100a3 protein_coding protein_coding MGP_BALBcJ_T0062050.1 MGP_BALBcJ_G0027445.1 mouse_genomes_project 3 87853485 87855940 + S100a3 protein_coding retained_intron MGP_BALBcJ_T0101065.1 MGP_BALBcJ_G0039101.1 mouse_genomes_project 3 101915532 101915648 + Gm23077 snoRNA snoRNA MGP_BALBcJ_T0064067.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142046227 142060687 - MGP_BALBcJ_P0064067 Lmo4 protein_coding protein_coding MGP_BALBcJ_T0064068.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142046227 142063776 - MGP_BALBcJ_P0064068 Lmo4 protein_coding protein_coding MGP_BALBcJ_T0064069.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142046329 142060623 - MGP_BALBcJ_P0064069 Lmo4 protein_coding protein_coding MGP_BALBcJ_T0064070.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142046380 142063776 - MGP_BALBcJ_P0064070 Lmo4 protein_coding protein_coding MGP_BALBcJ_T0064071.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142046759 142052472 - Lmo4 protein_coding retained_intron MGP_BALBcJ_T0064072.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142051641 142061254 - MGP_BALBcJ_P0064072 Lmo4 protein_coding protein_coding MGP_BALBcJ_T0064073.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142059073 142063736 - Lmo4 protein_coding retained_intron MGP_BALBcJ_T0064074.1 MGP_BALBcJ_G0027918.1 mouse_genomes_project 3 142059913 142060591 - Lmo4 protein_coding retained_intron MGP_BALBcJ_T0014089.1 MGP_BALBcJ_G0012186.1 mouse_genomes_project 3 67140118 67140845 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060026.1 MGP_BALBcJ_G0027043.1 mouse_genomes_project 3 7245691 7268254 - MGP_BALBcJ_P0060026 Snx16 protein_coding protein_coding MGP_BALBcJ_T0060027.1 MGP_BALBcJ_G0027043.1 mouse_genomes_project 3 7246020 7268239 - MGP_BALBcJ_P0060027 Snx16 protein_coding protein_coding MGP_BALBcJ_T0060028.1 MGP_BALBcJ_G0027043.1 mouse_genomes_project 3 7246811 7268252 - MGP_BALBcJ_P0060028 Snx16 protein_coding protein_coding MGP_BALBcJ_T0007538.1 MGP_BALBcJ_G0006168.1 mouse_genomes_project 3 60420721 60423489 - lincRNA lincRNA MGP_BALBcJ_T0060044.1 MGP_BALBcJ_G0027047.1 mouse_genomes_project 3 11433574 11458851 + MGP_BALBcJ_P0060044 E2f5 protein_coding protein_coding MGP_BALBcJ_T0060045.1 MGP_BALBcJ_G0027047.1 mouse_genomes_project 3 11433604 11458850 + MGP_BALBcJ_P0060045 E2f5 protein_coding protein_coding MGP_BALBcJ_T0007665.1 MGP_BALBcJ_G0006265.1 mouse_genomes_project 3 125768014 125771687 + Gm42586 lincRNA lincRNA MGP_BALBcJ_T0014130.1 MGP_BALBcJ_G0012227.1 mouse_genomes_project 3 83118547 83118835 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014142.1 MGP_BALBcJ_G0012239.1 mouse_genomes_project 3 85837659 85838349 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014081.1 MGP_BALBcJ_G0012178.1 mouse_genomes_project 3 66393668 66394209 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098925.1 MGP_BALBcJ_G0036972.1 mouse_genomes_project 3 102563489 102565244 - Gm42659 sense_intronic sense_intronic MGP_BALBcJ_T0060312.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27925747 27953243 + MGP_BALBcJ_P0060312 Skil protein_coding protein_coding MGP_BALBcJ_T0060313.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27925750 27932082 + Skil protein_coding retained_intron MGP_BALBcJ_T0060314.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27925750 27953247 + MGP_BALBcJ_P0060314 Skil protein_coding protein_coding MGP_BALBcJ_T0060315.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27925754 27928581 + MGP_BALBcJ_P0060315 Skil protein_coding protein_coding MGP_BALBcJ_T0060316.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27925814 27949957 + MGP_BALBcJ_P0060316 Skil protein_coding protein_coding MGP_BALBcJ_T0060317.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27927521 27949668 + MGP_BALBcJ_P0060317 Skil protein_coding protein_coding MGP_BALBcJ_T0060318.1 MGP_BALBcJ_G0027103.1 mouse_genomes_project 3 27928019 27953250 + MGP_BALBcJ_P0060318 Skil protein_coding unknown_likely_coding MGP_BALBcJ_T0101046.1 MGP_BALBcJ_G0039082.1 mouse_genomes_project 3 79062879 79063019 + Gm22531 snoRNA snoRNA MGP_BALBcJ_T0062016.1 MGP_BALBcJ_G0027438.1 mouse_genomes_project 3 87722310 87735134 + Ilf2 protein_coding retained_intron MGP_BALBcJ_T0062017.1 MGP_BALBcJ_G0027438.1 mouse_genomes_project 3 87722324 87725493 + Ilf2 protein_coding retained_intron MGP_BALBcJ_T0062018.1 MGP_BALBcJ_G0027438.1 mouse_genomes_project 3 87722331 87728716 + Ilf2 protein_coding retained_intron MGP_BALBcJ_T0062019.1 MGP_BALBcJ_G0027438.1 mouse_genomes_project 3 87722331 87735550 + MGP_BALBcJ_P0062019 Ilf2 protein_coding protein_coding MGP_BALBcJ_T0062020.1 MGP_BALBcJ_G0027438.1 mouse_genomes_project 3 87722341 87732643 + Ilf2 protein_coding retained_intron MGP_BALBcJ_T0062021.1 MGP_BALBcJ_G0027438.1 mouse_genomes_project 3 87727103 87733564 + Ilf2 protein_coding retained_intron MGP_BALBcJ_T0101902.1 MGP_BALBcJ_G0039789.1 mouse_genomes_project 3 55655338 55658962 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101903.1 MGP_BALBcJ_G0039789.1 mouse_genomes_project 3 55657073 55679711 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0063966.1 MGP_BALBcJ_G0027899.1 mouse_genomes_project 3 136267479 136269818 + Adh4 protein_coding processed_transcript MGP_BALBcJ_T0063967.1 MGP_BALBcJ_G0027899.1 mouse_genomes_project 3 136267500 136277903 + MGP_BALBcJ_P0063967 Adh4 protein_coding protein_coding MGP_BALBcJ_T0063968.1 MGP_BALBcJ_G0027899.1 mouse_genomes_project 3 136267508 136284812 + MGP_BALBcJ_P0063968 Adh4 protein_coding protein_coding MGP_BALBcJ_T0060793.1 MGP_BALBcJ_G0027188.1 mouse_genomes_project 3 51642850 51657261 + MGP_BALBcJ_P0060793 Alg5 protein_coding protein_coding MGP_BALBcJ_T0060794.1 MGP_BALBcJ_G0027188.1 mouse_genomes_project 3 51642870 51658784 + MGP_BALBcJ_P0060794 Alg5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060795.1 MGP_BALBcJ_G0027188.1 mouse_genomes_project 3 51642878 51652938 + MGP_BALBcJ_P0060795 Alg5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060796.1 MGP_BALBcJ_G0027188.1 mouse_genomes_project 3 51642884 51647037 + Alg5 protein_coding retained_intron MGP_BALBcJ_T0004395.1 MGP_BALBcJ_G0003833.1 mouse_genomes_project 3 155582815 155589391 - Gm43159 antisense antisense MGP_BALBcJ_T0061974.1 MGP_BALBcJ_G0027431.1 mouse_genomes_project 3 87479418 87485433 - MGP_BALBcJ_P0061974 Creb3l4 protein_coding protein_coding MGP_BALBcJ_T0061975.1 MGP_BALBcJ_G0027431.1 mouse_genomes_project 3 87479488 87485064 - MGP_BALBcJ_P0061975 Creb3l4 protein_coding protein_coding MGP_BALBcJ_T0014012.1 MGP_BALBcJ_G0012109.1 mouse_genomes_project 3 46960034 46960356 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007664.1 MGP_BALBcJ_G0006264.1 mouse_genomes_project 3 124095398 124097421 + Gm42827 lincRNA lincRNA MGP_BALBcJ_T0062446.1 MGP_BALBcJ_G0027567.1 mouse_genomes_project 3 93396510 93405337 - MGP_BALBcJ_P0062446 Mrps21 protein_coding protein_coding MGP_BALBcJ_T0062447.1 MGP_BALBcJ_G0027567.1 mouse_genomes_project 3 93396530 93404437 - MGP_BALBcJ_P0062447 Mrps21 protein_coding protein_coding MGP_BALBcJ_T0062448.1 MGP_BALBcJ_G0027567.1 mouse_genomes_project 3 93396532 93397184 - Mrps21 protein_coding processed_transcript MGP_BALBcJ_T0062449.1 MGP_BALBcJ_G0027567.1 mouse_genomes_project 3 93396760 93405185 - MGP_BALBcJ_P0062449 Mrps21 protein_coding protein_coding MGP_BALBcJ_T0004296.1 MGP_BALBcJ_G0003768.1 mouse_genomes_project 3 97788454 97794334 - Spag17os antisense antisense MGP_BALBcJ_T0004297.1 MGP_BALBcJ_G0003768.1 mouse_genomes_project 3 97790429 97794334 - Spag17os antisense antisense MGP_BALBcJ_T0061372.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83424281 83743738 + MGP_BALBcJ_P0061372 Lrba protein_coding unknown_likely_coding MGP_BALBcJ_T0061373.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83424604 83986367 + MGP_BALBcJ_P0061373 Lrba protein_coding protein_coding MGP_BALBcJ_T0061374.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83424604 83980637 + MGP_BALBcJ_P0061374 Lrba protein_coding protein_coding MGP_BALBcJ_T0061375.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83424604 83950381 + MGP_BALBcJ_P0061375 Lrba protein_coding protein_coding MGP_BALBcJ_T0061376.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83548547 83549886 + Lrba protein_coding retained_intron MGP_BALBcJ_T0061377.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83742426 83811013 + Lrba protein_coding retained_intron MGP_BALBcJ_T0061380.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83747899 83824865 + Lrba protein_coding retained_intron MGP_BALBcJ_T0061381.1 MGP_BALBcJ_G0027327.1 mouse_genomes_project 3 83749360 83986370 + MGP_BALBcJ_P0061381 Lrba protein_coding protein_coding MGP_BALBcJ_T0014245.1 MGP_BALBcJ_G0012342.1 mouse_genomes_project 3 111504636 111505243 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013997.1 MGP_BALBcJ_G0012094.1 mouse_genomes_project 3 42158814 42159064 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062720.1 MGP_BALBcJ_G0027646.1 mouse_genomes_project 3 98954939 98966959 - MGP_BALBcJ_P0062720 Cd2 protein_coding protein_coding MGP_BALBcJ_T0062721.1 MGP_BALBcJ_G0027646.1 mouse_genomes_project 3 98954948 98959422 - Cd2 protein_coding retained_intron MGP_BALBcJ_T0062722.1 MGP_BALBcJ_G0027646.1 mouse_genomes_project 3 98962082 98966899 - Cd2 protein_coding retained_intron MGP_BALBcJ_T0061881.1 MGP_BALBcJ_G0027420.1 mouse_genomes_project 3 87058353 87086362 + MGP_BALBcJ_P0061881 She protein_coding protein_coding MGP_BALBcJ_T0061882.1 MGP_BALBcJ_G0027420.1 mouse_genomes_project 3 87065036 87066515 + She protein_coding retained_intron MGP_BALBcJ_T0001170.1 MGP_BALBcJ_G0001095.1 mouse_genomes_project 3 46084775 46085841 + TEC TEC MGP_BALBcJ_T0007752.1 MGP_BALBcJ_G0006336.1 mouse_genomes_project 3 150009991 150013709 + Gm43619 lincRNA lincRNA MGP_BALBcJ_T0062326.1 MGP_BALBcJ_G0027549.1 mouse_genomes_project 3 92761263 92771212 - MGP_BALBcJ_P0062326 Bnipl protein_coding protein_coding MGP_BALBcJ_T0062327.1 MGP_BALBcJ_G0027549.1 mouse_genomes_project 3 92761287 92771068 - MGP_BALBcJ_P0062327 Bnipl protein_coding protein_coding MGP_BALBcJ_T0062328.1 MGP_BALBcJ_G0027549.1 mouse_genomes_project 3 92761817 92771155 - MGP_BALBcJ_P0062328 Bnipl protein_coding protein_coding MGP_BALBcJ_T0062329.1 MGP_BALBcJ_G0027549.1 mouse_genomes_project 3 92763074 92771167 - MGP_BALBcJ_P0062329 Bnipl protein_coding protein_coding MGP_BALBcJ_T0062330.1 MGP_BALBcJ_G0027549.1 mouse_genomes_project 3 92765229 92768598 - Bnipl protein_coding retained_intron MGP_BALBcJ_T0010526.1 MGP_BALBcJ_G0008651.1 mouse_genomes_project 3 106831421 106831535 + Gm44384 miRNA miRNA MGP_BALBcJ_T0010514.1 MGP_BALBcJ_G0008639.1 mouse_genomes_project 3 87513697 87513761 + Mir7012 miRNA miRNA MGP_BALBcJ_T0007530.1 MGP_BALBcJ_G0006162.1 mouse_genomes_project 3 54829485 54834056 - Gm42512 lincRNA lincRNA MGP_BALBcJ_T0060229.1 MGP_BALBcJ_G0027088.1 mouse_genomes_project 3 25523730 25556776 + MGP_BALBcJ_P0060229 Slc2a2 protein_coding protein_coding MGP_BALBcJ_T0060230.1 MGP_BALBcJ_G0027088.1 mouse_genomes_project 3 25523844 25552893 + MGP_BALBcJ_P0060230 Slc2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060231.1 MGP_BALBcJ_G0027088.1 mouse_genomes_project 3 25546933 25553744 + Slc2a2 protein_coding retained_intron MGP_BALBcJ_T0010550.1 MGP_BALBcJ_G0008675.1 mouse_genomes_project 3 155599521 155599592 + Mir186 miRNA miRNA MGP_BALBcJ_T0004282.1 MGP_BALBcJ_G0003759.1 mouse_genomes_project 3 93405339 93422151 + C920021L13Rik antisense antisense MGP_BALBcJ_T0004283.1 MGP_BALBcJ_G0003759.1 mouse_genomes_project 3 93405342 93423304 + C920021L13Rik antisense antisense MGP_BALBcJ_T0004284.1 MGP_BALBcJ_G0003759.1 mouse_genomes_project 3 93405348 93408710 + C920021L13Rik antisense antisense MGP_BALBcJ_T0061363.1 MGP_BALBcJ_G0027325.1 mouse_genomes_project 3 83199860 83208558 - MGP_BALBcJ_P0061363 Prss48 protein_coding protein_coding MGP_BALBcJ_T0063546.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121431260 121574980 - MGP_BALBcJ_P0063546 Ndst3 protein_coding protein_coding MGP_BALBcJ_T0063547.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121431266 121590650 - MGP_BALBcJ_P0063547 Ndst3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063548.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121431268 121590650 - MGP_BALBcJ_P0063548 Ndst3 protein_coding protein_coding MGP_BALBcJ_T0063549.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121431269 121575064 - MGP_BALBcJ_P0063549 Ndst3 protein_coding protein_coding MGP_BALBcJ_T0063550.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121433658 121523233 - MGP_BALBcJ_P0063550 Ndst3 protein_coding protein_coding MGP_BALBcJ_T0063551.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121433787 121590078 - MGP_BALBcJ_P0063551 Ndst3 protein_coding protein_coding MGP_BALBcJ_T0063552.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121457457 121575249 - Ndst3 protein_coding retained_intron MGP_BALBcJ_T0063553.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121461292 121464752 - Ndst3 protein_coding retained_intron MGP_BALBcJ_T0063554.1 MGP_BALBcJ_G0027822.1 mouse_genomes_project 3 121461463 121480700 - Ndst3 protein_coding processed_transcript MGP_BALBcJ_T0001289.1 MGP_BALBcJ_G0001212.1 mouse_genomes_project 3 114442303 114444662 - TEC TEC MGP_BALBcJ_T0061480.1 MGP_BALBcJ_G0027350.1 mouse_genomes_project 3 85208446 85210758 + Nes protein_coding retained_intron MGP_BALBcJ_T0061481.1 MGP_BALBcJ_G0027350.1 mouse_genomes_project 3 85208461 85218088 + MGP_BALBcJ_P0061481 Nes protein_coding protein_coding MGP_BALBcJ_T0061482.1 MGP_BALBcJ_G0027350.1 mouse_genomes_project 3 85208497 85218088 + MGP_BALBcJ_P0061482 Nes protein_coding protein_coding MGP_BALBcJ_T0007479.1 MGP_BALBcJ_G0006126.1 mouse_genomes_project 3 33177587 33179921 - Gm43204 lincRNA lincRNA MGP_BALBcJ_T0014000.1 MGP_BALBcJ_G0012097.1 mouse_genomes_project 3 43290915 43291634 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001323.1 MGP_BALBcJ_G0001246.1 mouse_genomes_project 3 124865716 124867292 - TEC TEC MGP_BALBcJ_T0004188.1 MGP_BALBcJ_G0003692.1 mouse_genomes_project 3 25528494 25605406 - antisense antisense MGP_BALBcJ_T0004189.1 MGP_BALBcJ_G0003692.1 mouse_genomes_project 3 25564205 25567665 - antisense antisense MGP_BALBcJ_T0060878.1 MGP_BALBcJ_G0027206.1 mouse_genomes_project 3 54716751 54722936 - MGP_BALBcJ_P0060878 Pfn2 protein_coding protein_coding MGP_BALBcJ_T0060879.1 MGP_BALBcJ_G0027206.1 mouse_genomes_project 3 54716761 54722002 - MGP_BALBcJ_P0060879 Pfn2 protein_coding protein_coding MGP_BALBcJ_T0060880.1 MGP_BALBcJ_G0027206.1 mouse_genomes_project 3 54717964 54720735 - MGP_BALBcJ_P0060880 Pfn2 protein_coding protein_coding MGP_BALBcJ_T0060881.1 MGP_BALBcJ_G0027206.1 mouse_genomes_project 3 54719517 54722406 - MGP_BALBcJ_P0060881 Pfn2 protein_coding protein_coding MGP_BALBcJ_T0062654.1 MGP_BALBcJ_G0027626.1 mouse_genomes_project 3 96175980 96179066 - MGP_BALBcJ_P0062654 protein_coding protein_coding MGP_BALBcJ_T0011529.1 MGP_BALBcJ_G0009654.1 mouse_genomes_project 3 119225173 119225441 + Gm26027 misc_RNA misc_RNA MGP_BALBcJ_T0063602.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124812758 124889839 - MGP_BALBcJ_P0063602 protein_coding protein_coding MGP_BALBcJ_T0063603.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124812760 124815143 - protein_coding retained_intron MGP_BALBcJ_T0063604.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124812760 124834996 - MGP_BALBcJ_P0063604 protein_coding protein_coding MGP_BALBcJ_T0063605.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124815082 124821170 - MGP_BALBcJ_P0063605 protein_coding protein_coding MGP_BALBcJ_T0063606.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124815083 124821170 - MGP_BALBcJ_P0063606 protein_coding protein_coding MGP_BALBcJ_T0063607.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124816958 124819726 - protein_coding retained_intron MGP_BALBcJ_T0063608.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124824540 124826462 - protein_coding retained_intron MGP_BALBcJ_T0063609.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124829381 124847665 - MGP_BALBcJ_P0063609 protein_coding protein_coding MGP_BALBcJ_T0063610.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124831728 124847464 - MGP_BALBcJ_P0063610 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063611.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124838721 125311098 - MGP_BALBcJ_P0063611 protein_coding protein_coding MGP_BALBcJ_T0063612.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124841780 124889815 - protein_coding retained_intron MGP_BALBcJ_T0063613.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124850618 125401392 - MGP_BALBcJ_P0063613 protein_coding protein_coding MGP_BALBcJ_T0063614.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124851450 125311037 - MGP_BALBcJ_P0063614 protein_coding protein_coding MGP_BALBcJ_T0063615.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124907278 124916216 - protein_coding retained_intron MGP_BALBcJ_T0063616.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124916741 125311070 - MGP_BALBcJ_P0063616 protein_coding protein_coding MGP_BALBcJ_T0063617.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124916811 125311070 - MGP_BALBcJ_P0063617 protein_coding protein_coding MGP_BALBcJ_T0063618.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124923406 125053140 - MGP_BALBcJ_P0063618 protein_coding protein_coding MGP_BALBcJ_T0063619.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124923406 125311006 - MGP_BALBcJ_P0063619 protein_coding protein_coding MGP_BALBcJ_T0063620.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124971477 125115135 - MGP_BALBcJ_P0063620 protein_coding protein_coding MGP_BALBcJ_T0063621.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124972082 125053033 - protein_coding retained_intron MGP_BALBcJ_T0063622.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 124973892 125310993 - MGP_BALBcJ_P0063622 protein_coding protein_coding MGP_BALBcJ_T0063623.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 125050513 125052999 - protein_coding retained_intron MGP_BALBcJ_T0063624.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 125224644 125311034 - protein_coding retained_intron MGP_BALBcJ_T0063625.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 125226274 125401044 - protein_coding retained_intron MGP_BALBcJ_T0063626.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 125398148 125401302 - protein_coding retained_intron MGP_BALBcJ_T0063627.1 MGP_BALBcJ_G0027830.1 mouse_genomes_project 3 125400704 125401043 - MGP_BALBcJ_P0063627 protein_coding protein_coding MGP_BALBcJ_T0014104.1 MGP_BALBcJ_G0012201.1 mouse_genomes_project 3 72525551 72526853 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001158.1 MGP_BALBcJ_G0001083.1 mouse_genomes_project 3 37824861 37825784 - TEC TEC MGP_BALBcJ_T0060211.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25078860 25496595 + MGP_BALBcJ_P0060211 Tnik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060212.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25078861 25501867 + MGP_BALBcJ_P0060212 Tnik protein_coding protein_coding MGP_BALBcJ_T0060213.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25078922 25186191 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060214.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25078922 25325164 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060215.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079209 25492459 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060216.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079209 25494233 + MGP_BALBcJ_P0060216 Tnik protein_coding protein_coding MGP_BALBcJ_T0060217.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079209 25494233 + MGP_BALBcJ_P0060217 Tnik protein_coding protein_coding MGP_BALBcJ_T0060218.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079228 25080527 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060219.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079289 25493992 + MGP_BALBcJ_P0060219 Tnik protein_coding protein_coding MGP_BALBcJ_T0060220.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079289 25493992 + MGP_BALBcJ_P0060220 Tnik protein_coding protein_coding MGP_BALBcJ_T0060221.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079289 25493992 + MGP_BALBcJ_P0060221 Tnik protein_coding protein_coding MGP_BALBcJ_T0060222.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079289 25493992 + MGP_BALBcJ_P0060222 Tnik protein_coding protein_coding MGP_BALBcJ_T0060223.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25079289 25493992 + MGP_BALBcJ_P0060223 Tnik protein_coding protein_coding MGP_BALBcJ_T0060224.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25236118 25420874 + Tnik protein_coding processed_transcript MGP_BALBcJ_T0060225.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25360801 25362614 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060226.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25455753 25464303 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060227.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25476145 25491955 + Tnik protein_coding retained_intron MGP_BALBcJ_T0060228.1 MGP_BALBcJ_G0027087.1 mouse_genomes_project 3 25492855 25494759 + Tnik protein_coding retained_intron MGP_BALBcJ_T0004242.1 MGP_BALBcJ_G0003731.1 mouse_genomes_project 3 63023844 63028123 + Gm37305 antisense antisense MGP_BALBcJ_T0064126.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143509096 143537448 + MGP_BALBcJ_P0064126 Znhit6 protein_coding protein_coding MGP_BALBcJ_T0064127.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143509123 143538130 + MGP_BALBcJ_P0064127 Znhit6 protein_coding protein_coding MGP_BALBcJ_T0064128.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143509138 143511422 + MGP_BALBcJ_P0064128 Znhit6 protein_coding protein_coding MGP_BALBcJ_T0064129.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143509149 143528171 + MGP_BALBcJ_P0064129 Znhit6 protein_coding protein_coding MGP_BALBcJ_T0064130.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143509165 143515528 + MGP_BALBcJ_P0064130 Znhit6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064131.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143509227 143525792 + MGP_BALBcJ_P0064131 Znhit6 protein_coding protein_coding MGP_BALBcJ_T0064132.1 MGP_BALBcJ_G0027931.1 mouse_genomes_project 3 143529373 143537347 + Znhit6 protein_coding retained_intron MGP_BALBcJ_T0101089.1 MGP_BALBcJ_G0039125.1 mouse_genomes_project 3 151937372 151937443 - Snord45b snoRNA snoRNA MGP_BALBcJ_T0063941.1 MGP_BALBcJ_G0027892.1 mouse_genomes_project 3 135923236 135939725 + MGP_BALBcJ_P0063941 1110002E22Rik protein_coding protein_coding MGP_BALBcJ_T0063942.1 MGP_BALBcJ_G0027892.1 mouse_genomes_project 3 135929800 135935579 + 1110002E22Rik protein_coding processed_transcript MGP_BALBcJ_T0010515.1 MGP_BALBcJ_G0008640.1 mouse_genomes_project 3 89320390 89320500 - Gm23697 miRNA miRNA MGP_BALBcJ_T0014303.1 MGP_BALBcJ_G0012400.1 mouse_genomes_project 3 132832075 132850257 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060490.1 MGP_BALBcJ_G0027135.1 mouse_genomes_project 3 33522556 33596654 - MGP_BALBcJ_P0060490 Trpc3 protein_coding protein_coding MGP_BALBcJ_T0060491.1 MGP_BALBcJ_G0027135.1 mouse_genomes_project 3 33522636 33523436 - Trpc3 protein_coding processed_transcript MGP_BALBcJ_T0060492.1 MGP_BALBcJ_G0027135.1 mouse_genomes_project 3 33522636 33523414 - Trpc3 protein_coding processed_transcript MGP_BALBcJ_T0060493.1 MGP_BALBcJ_G0027135.1 mouse_genomes_project 3 33543346 33545611 - Trpc3 protein_coding retained_intron MGP_BALBcJ_T0060494.1 MGP_BALBcJ_G0027135.1 mouse_genomes_project 3 33575740 33596654 - Trpc3 protein_coding retained_intron MGP_BALBcJ_T0060934.1 MGP_BALBcJ_G0027222.1 mouse_genomes_project 3 56734226 56751128 + protein_coding unprocessed_pseudogene MGP_BALBcJ_T0001172.1 MGP_BALBcJ_G0001097.1 mouse_genomes_project 3 47493711 47495043 - TEC TEC MGP_BALBcJ_T0101059.1 MGP_BALBcJ_G0039095.1 mouse_genomes_project 3 93723526 93723653 + Gm22027 snoRNA snoRNA MGP_BALBcJ_T0061416.1 MGP_BALBcJ_G0027338.1 mouse_genomes_project 3 84846741 84933361 + Arhgef11 protein_coding retained_intron MGP_BALBcJ_T0061417.1 MGP_BALBcJ_G0027338.1 mouse_genomes_project 3 84846753 84973673 + MGP_BALBcJ_P0061417 Arhgef11 protein_coding unknown_likely_coding MGP_BALBcJ_T0061418.1 MGP_BALBcJ_G0027338.1 mouse_genomes_project 3 84846757 84974604 + MGP_BALBcJ_P0061418 Arhgef11 protein_coding protein_coding MGP_BALBcJ_T0061419.1 MGP_BALBcJ_G0027338.1 mouse_genomes_project 3 84846767 84972480 + MGP_BALBcJ_P0061419 Arhgef11 protein_coding protein_coding MGP_BALBcJ_T0061420.1 MGP_BALBcJ_G0027338.1 mouse_genomes_project 3 84846774 84953474 + Arhgef11 protein_coding retained_intron MGP_BALBcJ_T0061421.1 MGP_BALBcJ_G0027338.1 mouse_genomes_project 3 84847283 84974605 + MGP_BALBcJ_P0061421 Arhgef11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0007536.1 MGP_BALBcJ_G0006166.1 mouse_genomes_project 3 57723672 57730031 + Gm38326 lincRNA lincRNA MGP_BALBcJ_T0013897.1 MGP_BALBcJ_G0011994.1 mouse_genomes_project 3 7890491 7890680 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004352.1 MGP_BALBcJ_G0003801.1 mouse_genomes_project 3 125742826 125744567 + Gm43653 antisense antisense MGP_BALBcJ_T0014332.1 MGP_BALBcJ_G0012429.1 mouse_genomes_project 3 138469738 138469991 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014123.1 MGP_BALBcJ_G0012220.1 mouse_genomes_project 3 79762113 79762612 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062512.1 MGP_BALBcJ_G0027585.1 mouse_genomes_project 3 93811195 93811683 + MGP_BALBcJ_P0062512 Hist2h3b protein_coding protein_coding MGP_BALBcJ_T0004346.1 MGP_BALBcJ_G0003796.1 mouse_genomes_project 3 121355086 121358206 - Gm43591 antisense antisense MGP_BALBcJ_T0001124.1 MGP_BALBcJ_G0001049.1 mouse_genomes_project 3 27094771 27096835 - TEC TEC MGP_BALBcJ_T0017973.1 MGP_BALBcJ_G0015464.1 mouse_genomes_project 3 126033877 126145144 - D030025E07Rik processed_transcript lincRNA MGP_BALBcJ_T0017974.1 MGP_BALBcJ_G0015464.1 mouse_genomes_project 3 126041051 126050632 - D030025E07Rik processed_transcript lincRNA MGP_BALBcJ_T0017975.1 MGP_BALBcJ_G0015464.1 mouse_genomes_project 3 126041428 126145147 - D030025E07Rik processed_transcript retained_intron MGP_BALBcJ_T0017976.1 MGP_BALBcJ_G0015464.1 mouse_genomes_project 3 126059889 126145094 - D030025E07Rik processed_transcript retained_intron MGP_BALBcJ_T0017977.1 MGP_BALBcJ_G0015464.1 mouse_genomes_project 3 126107563 126145133 - D030025E07Rik processed_transcript lincRNA MGP_BALBcJ_T0013917.1 MGP_BALBcJ_G0012014.1 mouse_genomes_project 3 14137886 14139225 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013884.1 MGP_BALBcJ_G0011981.1 mouse_genomes_project 3 5277277 5278085 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061868.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86942079 86943746 + Adar protein_coding retained_intron MGP_BALBcJ_T0061869.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86942389 86962188 + Adar protein_coding processed_transcript MGP_BALBcJ_T0061870.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86957785 86978589 + MGP_BALBcJ_P0061870 Adar protein_coding protein_coding MGP_BALBcJ_T0061871.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86957785 86978589 + MGP_BALBcJ_P0061871 Adar protein_coding protein_coding MGP_BALBcJ_T0061872.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86957785 86978589 + MGP_BALBcJ_P0061872 Adar protein_coding protein_coding MGP_BALBcJ_T0061873.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86957848 86978358 + MGP_BALBcJ_P0061873 Adar protein_coding protein_coding MGP_BALBcJ_T0061874.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86964620 86966324 + Adar protein_coding retained_intron MGP_BALBcJ_T0061875.1 MGP_BALBcJ_G0027417.1 mouse_genomes_project 3 86972770 86974337 + Adar protein_coding retained_intron MGP_BALBcJ_T0102484.1 MGP_BALBcJ_G0040300.1 mouse_genomes_project 3 91033542 91033738 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014060.1 MGP_BALBcJ_G0012157.1 mouse_genomes_project 3 60763123 60763774 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010527.1 MGP_BALBcJ_G0008652.1 mouse_genomes_project 3 113841595 113841649 + Mir669n miRNA miRNA MGP_BALBcJ_T0063672.1 MGP_BALBcJ_G0027840.1 mouse_genomes_project 3 127175851 127239217 - MGP_BALBcJ_P0063672 Enpep protein_coding protein_coding MGP_BALBcJ_T0063673.1 MGP_BALBcJ_G0027840.1 mouse_genomes_project 3 127176953 127238761 - MGP_BALBcJ_P0063673 Enpep protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063674.1 MGP_BALBcJ_G0027840.1 mouse_genomes_project 3 127183244 127187667 - Enpep protein_coding retained_intron MGP_BALBcJ_T0063675.1 MGP_BALBcJ_G0027840.1 mouse_genomes_project 3 127183415 127215697 - MGP_BALBcJ_P0063675 Enpep protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063676.1 MGP_BALBcJ_G0027840.1 mouse_genomes_project 3 127205255 127239217 - Enpep protein_coding retained_intron MGP_BALBcJ_T0010530.1 MGP_BALBcJ_G0008655.1 mouse_genomes_project 3 116327532 116327642 + Gm24155 miRNA miRNA MGP_BALBcJ_T0061176.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73006332 73089403 - MGP_BALBcJ_P0061176 Golim4 protein_coding protein_coding MGP_BALBcJ_T0061177.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73007431 73089423 - MGP_BALBcJ_P0061177 Golim4 protein_coding protein_coding MGP_BALBcJ_T0061178.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73007727 73010597 - Golim4 protein_coding retained_intron MGP_BALBcJ_T0061179.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73008907 73089411 - MGP_BALBcJ_P0061179 Golim4 protein_coding protein_coding MGP_BALBcJ_T0061180.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73018728 73024900 - Golim4 protein_coding retained_intron MGP_BALBcJ_T0061181.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73026638 73034649 - MGP_BALBcJ_P0061181 Golim4 protein_coding protein_coding MGP_BALBcJ_T0061182.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73031429 73089382 - Golim4 protein_coding retained_intron MGP_BALBcJ_T0061183.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73042068 73089124 - Golim4 protein_coding retained_intron MGP_BALBcJ_T0061184.1 MGP_BALBcJ_G0027281.1 mouse_genomes_project 3 73087589 73089405 - Golim4 protein_coding retained_intron MGP_BALBcJ_T0061101.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65960254 66067434 - Ift80 protein_coding retained_intron MGP_BALBcJ_T0061102.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65960254 66067418 - MGP_BALBcJ_P0061102 Ift80 protein_coding protein_coding MGP_BALBcJ_T0061103.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65960280 66067445 - MGP_BALBcJ_P0061103 Ift80 protein_coding protein_coding MGP_BALBcJ_T0061104.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65960280 66056261 - MGP_BALBcJ_P0061104 Ift80 protein_coding protein_coding MGP_BALBcJ_T0061105.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65961400 65982716 - Ift80 protein_coding retained_intron MGP_BALBcJ_T0061106.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65977403 65977753 - Ift80 protein_coding retained_intron MGP_BALBcJ_T0061107.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65980082 66067373 - Ift80 protein_coding retained_intron MGP_BALBcJ_T0061108.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 65999057 66033161 - Ift80 protein_coding processed_transcript MGP_BALBcJ_T0061109.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 66023050 66067352 - MGP_BALBcJ_P0061109 Ift80 protein_coding protein_coding MGP_BALBcJ_T0061110.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 66027335 66067359 - MGP_BALBcJ_P0061110 Ift80 protein_coding protein_coding MGP_BALBcJ_T0061111.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 66032719 66067263 - Ift80 protein_coding processed_transcript MGP_BALBcJ_T0061112.1 MGP_BALBcJ_G0027263.1 mouse_genomes_project 3 66065169 66067400 - Ift80 protein_coding retained_intron MGP_BALBcJ_T0063545.1 MGP_BALBcJ_G0027821.1 mouse_genomes_project 3 121357671 121411508 + MGP_BALBcJ_P0063545 Prss12 protein_coding protein_coding MGP_BALBcJ_T0060418.1 MGP_BALBcJ_G0027121.1 mouse_genomes_project 3 30859498 30884789 - MGP_BALBcJ_P0060418 Dnajc19 protein_coding protein_coding MGP_BALBcJ_T0060419.1 MGP_BALBcJ_G0027121.1 mouse_genomes_project 3 30880755 30884798 - MGP_BALBcJ_P0060419 Dnajc19 protein_coding protein_coding MGP_BALBcJ_T0060420.1 MGP_BALBcJ_G0027121.1 mouse_genomes_project 3 30880800 30884787 - MGP_BALBcJ_P0060420 Dnajc19 protein_coding protein_coding MGP_BALBcJ_T0060421.1 MGP_BALBcJ_G0027121.1 mouse_genomes_project 3 30880830 30883657 - Dnajc19 protein_coding retained_intron MGP_BALBcJ_T0060422.1 MGP_BALBcJ_G0027121.1 mouse_genomes_project 3 30880910 30884739 - MGP_BALBcJ_P0060422 Dnajc19 protein_coding protein_coding MGP_BALBcJ_T0001312.1 MGP_BALBcJ_G0001235.1 mouse_genomes_project 3 122250765 122251700 - TEC TEC MGP_BALBcJ_T0004251.1 MGP_BALBcJ_G0003737.1 mouse_genomes_project 3 80953655 80969752 - Gm26771 antisense antisense MGP_BALBcJ_T0014298.1 MGP_BALBcJ_G0012395.1 mouse_genomes_project 3 130865099 130865528 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014064.1 MGP_BALBcJ_G0012161.1 mouse_genomes_project 3 62999395 62999819 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060742.1 MGP_BALBcJ_G0027179.1 mouse_genomes_project 3 50378932 50393903 + Stoml3 protein_coding retained_intron MGP_BALBcJ_T0060743.1 MGP_BALBcJ_G0027179.1 mouse_genomes_project 3 50379006 50404518 + MGP_BALBcJ_P0060743 Stoml3 protein_coding protein_coding MGP_BALBcJ_T0007643.1 MGP_BALBcJ_G0006250.1 mouse_genomes_project 3 114359272 114363685 + Gm26530 lincRNA lincRNA MGP_BALBcJ_T0014055.1 MGP_BALBcJ_G0012152.1 mouse_genomes_project 3 58260287 58260782 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011525.1 MGP_BALBcJ_G0009650.1 mouse_genomes_project 3 93994771 93995194 - Terc misc_RNA misc_RNA MGP_BALBcJ_T0014236.1 MGP_BALBcJ_G0012333.1 mouse_genomes_project 3 109098912 109100440 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062738.1 MGP_BALBcJ_G0027651.1 mouse_genomes_project 3 99696861 99701517 + MGP_BALBcJ_P0062738 Nhlh2 protein_coding protein_coding MGP_BALBcJ_T0062739.1 MGP_BALBcJ_G0027651.1 mouse_genomes_project 3 99696931 99702292 + MGP_BALBcJ_P0062739 Nhlh2 protein_coding protein_coding MGP_BALBcJ_T0062740.1 MGP_BALBcJ_G0027651.1 mouse_genomes_project 3 99696940 99701291 + MGP_BALBcJ_P0062740 Nhlh2 protein_coding protein_coding MGP_BALBcJ_T0063509.1 MGP_BALBcJ_G0027814.1 mouse_genomes_project 3 120829706 120836005 - MGP_BALBcJ_P0063509 Gm10959 protein_coding protein_coding MGP_BALBcJ_T0011508.1 MGP_BALBcJ_G0009633.1 mouse_genomes_project 3 6233865 6234174 + Gm22604 misc_RNA misc_RNA MGP_BALBcJ_T0013980.1 MGP_BALBcJ_G0012077.1 mouse_genomes_project 3 35334227 35335059 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061145.1 MGP_BALBcJ_G0027271.1 mouse_genomes_project 3 66908007 66946194 - MGP_BALBcJ_P0061145 Sptssb protein_coding protein_coding MGP_BALBcJ_T0061146.1 MGP_BALBcJ_G0027271.1 mouse_genomes_project 3 66909043 66946176 - MGP_BALBcJ_P0061146 Sptssb protein_coding protein_coding MGP_BALBcJ_T0007619.1 MGP_BALBcJ_G0006230.1 mouse_genomes_project 3 100292550 100294771 + Gm42678 lincRNA lincRNA MGP_BALBcJ_T0099757.1 MGP_BALBcJ_G0037793.1 mouse_genomes_project 3 84145559 84145719 + Gm23376 snRNA snRNA MGP_BALBcJ_T0014273.1 MGP_BALBcJ_G0012370.1 mouse_genomes_project 3 120841106 120841301 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064244.1 MGP_BALBcJ_G0027954.1 mouse_genomes_project 3 149741617 149769566 - MGP_BALBcJ_P0064244 Ifi44 protein_coding protein_coding MGP_BALBcJ_T0064245.1 MGP_BALBcJ_G0027954.1 mouse_genomes_project 3 149743119 149769488 - Ifi44 protein_coding processed_transcript MGP_BALBcJ_T0064246.1 MGP_BALBcJ_G0027954.1 mouse_genomes_project 3 149765296 149769553 - Ifi44 protein_coding retained_intron MGP_BALBcJ_T0064247.1 MGP_BALBcJ_G0027954.1 mouse_genomes_project 3 149765397 149769509 - Ifi44 protein_coding processed_transcript MGP_BALBcJ_T0001108.1 MGP_BALBcJ_G0001033.1 mouse_genomes_project 3 7587521 7589207 - TEC TEC MGP_BALBcJ_T0001342.1 MGP_BALBcJ_G0001264.1 mouse_genomes_project 3 128460356 128466509 + TEC TEC MGP_BALBcJ_T0064212.1 MGP_BALBcJ_G0027951.1 mouse_genomes_project 3 144812946 144902562 + Ttll7 protein_coding retained_intron MGP_BALBcJ_T0064213.1 MGP_BALBcJ_G0027951.1 mouse_genomes_project 3 144812946 144945204 + MGP_BALBcJ_P0064213 Ttll7 protein_coding protein_coding MGP_BALBcJ_T0064214.1 MGP_BALBcJ_G0027951.1 mouse_genomes_project 3 144812946 144946463 + MGP_BALBcJ_P0064214 Ttll7 protein_coding protein_coding MGP_BALBcJ_T0064215.1 MGP_BALBcJ_G0027951.1 mouse_genomes_project 3 144858976 144942205 + MGP_BALBcJ_P0064215 Ttll7 protein_coding protein_coding MGP_BALBcJ_T0064216.1 MGP_BALBcJ_G0027951.1 mouse_genomes_project 3 144861456 144863307 + MGP_BALBcJ_P0064216 Ttll7 protein_coding protein_coding MGP_BALBcJ_T0064217.1 MGP_BALBcJ_G0027951.1 mouse_genomes_project 3 144906664 144944374 + Ttll7 protein_coding retained_intron MGP_BALBcJ_T0001276.1 MGP_BALBcJ_G0001199.1 mouse_genomes_project 3 104211740 104214324 + TEC TEC MGP_BALBcJ_T0064197.1 MGP_BALBcJ_G0027949.1 mouse_genomes_project 3 144600433 144641351 - MGP_BALBcJ_P0064197 Samd13 protein_coding protein_coding MGP_BALBcJ_T0064198.1 MGP_BALBcJ_G0027949.1 mouse_genomes_project 3 144601351 144638161 - MGP_BALBcJ_P0064198 Samd13 protein_coding protein_coding MGP_BALBcJ_T0064199.1 MGP_BALBcJ_G0027949.1 mouse_genomes_project 3 144601362 144638273 - MGP_BALBcJ_P0064199 Samd13 protein_coding protein_coding MGP_BALBcJ_T0064200.1 MGP_BALBcJ_G0027949.1 mouse_genomes_project 3 144601447 144641234 - MGP_BALBcJ_P0064200 Samd13 protein_coding protein_coding MGP_BALBcJ_T0064203.1 MGP_BALBcJ_G0027949.1 mouse_genomes_project 3 144636078 144641230 - Samd13 protein_coding retained_intron MGP_BALBcJ_T0014107.1 MGP_BALBcJ_G0012204.1 mouse_genomes_project 3 74038665 74039495 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013925.1 MGP_BALBcJ_G0012022.1 mouse_genomes_project 3 16460389 16460605 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014088.1 MGP_BALBcJ_G0012185.1 mouse_genomes_project 3 67052089 67052245 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062063.1 MGP_BALBcJ_G0027453.1 mouse_genomes_project 3 87947510 87950881 - MGP_BALBcJ_P0062063 S100a9 protein_coding protein_coding MGP_BALBcJ_T0062064.1 MGP_BALBcJ_G0027453.1 mouse_genomes_project 3 87947510 87950891 - MGP_BALBcJ_P0062064 S100a9 protein_coding protein_coding MGP_BALBcJ_T0060470.1 MGP_BALBcJ_G0027131.1 mouse_genomes_project 3 33381099 33387450 + MGP_BALBcJ_P0060470 1810062G17Rik protein_coding protein_coding MGP_BALBcJ_T0001394.1 MGP_BALBcJ_G0001316.1 mouse_genomes_project 3 156042980 156046388 + TEC TEC MGP_BALBcJ_T0060904.1 MGP_BALBcJ_G0027214.1 mouse_genomes_project 3 55867739 55962236 + MGP_BALBcJ_P0060904 Med12l protein_coding protein_coding MGP_BALBcJ_T0060905.1 MGP_BALBcJ_G0027214.1 mouse_genomes_project 3 55868401 56178537 + MGP_BALBcJ_P0060905 Med12l protein_coding protein_coding MGP_BALBcJ_T0060906.1 MGP_BALBcJ_G0027214.1 mouse_genomes_project 3 55868892 56178265 + MGP_BALBcJ_P0060906 Med12l protein_coding protein_coding MGP_BALBcJ_T0060907.1 MGP_BALBcJ_G0027214.1 mouse_genomes_project 3 55868892 56178265 + MGP_BALBcJ_P0060907 Med12l protein_coding protein_coding MGP_BALBcJ_T0060908.1 MGP_BALBcJ_G0027214.1 mouse_genomes_project 3 55868892 55961136 + MGP_BALBcJ_P0060908 Med12l protein_coding protein_coding MGP_BALBcJ_T0060928.1 MGP_BALBcJ_G0027214.1 mouse_genomes_project 3 56125381 56175756 + MGP_BALBcJ_P0060928 Med12l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061154.1 MGP_BALBcJ_G0027275.1 mouse_genomes_project 3 70768076 70844374 - MGP_BALBcJ_P0061154 Bche protein_coding protein_coding MGP_BALBcJ_T0061155.1 MGP_BALBcJ_G0027275.1 mouse_genomes_project 3 70783467 70844201 - Bche protein_coding retained_intron MGP_BALBcJ_T0061156.1 MGP_BALBcJ_G0027275.1 mouse_genomes_project 3 70837659 70844226 - MGP_BALBcJ_P0061156 Bche protein_coding protein_coding MGP_BALBcJ_T0061157.1 MGP_BALBcJ_G0027275.1 mouse_genomes_project 3 70840130 70844226 - Bche protein_coding processed_transcript MGP_BALBcJ_T0063331.1 MGP_BALBcJ_G0027781.1 mouse_genomes_project 3 114384270 114424798 + MGP_BALBcJ_P0063331 Dbt protein_coding protein_coding MGP_BALBcJ_T0063332.1 MGP_BALBcJ_G0027781.1 mouse_genomes_project 3 114384319 114413974 + MGP_BALBcJ_P0063332 Dbt protein_coding protein_coding MGP_BALBcJ_T0063333.1 MGP_BALBcJ_G0027781.1 mouse_genomes_project 3 114384328 114413996 + MGP_BALBcJ_P0063333 Dbt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063334.1 MGP_BALBcJ_G0027781.1 mouse_genomes_project 3 114391340 114406202 + Dbt protein_coding retained_intron MGP_BALBcJ_T0098922.1 MGP_BALBcJ_G0036969.1 mouse_genomes_project 3 102360558 102363411 + Gm43581 sense_intronic sense_intronic MGP_BALBcJ_T0004367.1 MGP_BALBcJ_G0003812.1 mouse_genomes_project 3 135714429 135716234 - Gm43403 antisense antisense MGP_BALBcJ_T0004368.1 MGP_BALBcJ_G0003812.1 mouse_genomes_project 3 135715547 135716044 - Gm43403 antisense antisense MGP_BALBcJ_T0014285.1 MGP_BALBcJ_G0012382.1 mouse_genomes_project 3 125603023 125603799 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010485.1 MGP_BALBcJ_G0008610.1 mouse_genomes_project 3 26238638 26238736 + Mir551b miRNA miRNA MGP_BALBcJ_T0060922.1 MGP_BALBcJ_G0027218.1 mouse_genomes_project 3 56075979 56078970 - MGP_BALBcJ_P0060922 P2ry13 protein_coding protein_coding MGP_BALBcJ_T0063216.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106567468 106617513 - MGP_BALBcJ_P0063216 Stxbp3 protein_coding protein_coding MGP_BALBcJ_T0063217.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106568720 106577193 - Stxbp3 protein_coding retained_intron MGP_BALBcJ_T0063218.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106569164 106572443 - Stxbp3 protein_coding retained_intron MGP_BALBcJ_T0063219.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106574770 106580876 - Stxbp3 protein_coding retained_intron MGP_BALBcJ_T0063220.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106585086 106617453 - MGP_BALBcJ_P0063220 Stxbp3 protein_coding protein_coding MGP_BALBcJ_T0063221.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106595741 106617517 - Stxbp3 protein_coding processed_transcript MGP_BALBcJ_T0063222.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106598471 106617528 - MGP_BALBcJ_P0063222 Stxbp3 protein_coding protein_coding MGP_BALBcJ_T0063223.1 MGP_BALBcJ_G0027758.1 mouse_genomes_project 3 106599998 106617512 - MGP_BALBcJ_P0063223 Stxbp3 protein_coding protein_coding MGP_BALBcJ_T0014353.1 MGP_BALBcJ_G0012450.1 mouse_genomes_project 3 149994259 149994966 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061048.1 MGP_BALBcJ_G0027248.1 mouse_genomes_project 3 63121432 63356068 - MGP_BALBcJ_P0061048 Veph1 protein_coding protein_coding MGP_BALBcJ_T0061049.1 MGP_BALBcJ_G0027248.1 mouse_genomes_project 3 63124841 63202871 - Veph1 protein_coding processed_transcript MGP_BALBcJ_T0061050.1 MGP_BALBcJ_G0027248.1 mouse_genomes_project 3 63125309 63292219 - MGP_BALBcJ_P0061050 Veph1 protein_coding unknown_likely_coding MGP_BALBcJ_T0061053.1 MGP_BALBcJ_G0027248.1 mouse_genomes_project 3 63313713 63355979 - Veph1 protein_coding retained_intron MGP_BALBcJ_T0004220.1 MGP_BALBcJ_G0003714.1 mouse_genomes_project 3 48858550 48867773 + Gm20089 antisense antisense MGP_BALBcJ_T0061024.1 MGP_BALBcJ_G0027245.1 mouse_genomes_project 3 62591450 62618499 + MGP_BALBcJ_P0061024 Tiparp protein_coding protein_coding MGP_BALBcJ_T0061025.1 MGP_BALBcJ_G0027245.1 mouse_genomes_project 3 62591500 62610589 + MGP_BALBcJ_P0061025 Tiparp protein_coding protein_coding MGP_BALBcJ_T0061026.1 MGP_BALBcJ_G0027245.1 mouse_genomes_project 3 62609032 62615613 + Tiparp protein_coding processed_transcript MGP_BALBcJ_T0061562.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85648099 85664290 - MGP_BALBcJ_P0061562 Pmf1 protein_coding protein_coding MGP_BALBcJ_T0061563.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85648099 85664285 - MGP_BALBcJ_P0061563 Pmf1 protein_coding protein_coding MGP_BALBcJ_T0061564.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85648335 85664224 - Pmf1 protein_coding processed_transcript MGP_BALBcJ_T0061565.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85649699 85650677 - Pmf1 protein_coding retained_intron MGP_BALBcJ_T0061566.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85650024 85664245 - MGP_BALBcJ_P0061566 Pmf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061567.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85651321 85653671 - Pmf1 protein_coding retained_intron MGP_BALBcJ_T0061568.1 MGP_BALBcJ_G0027368.1 mouse_genomes_project 3 85653493 85664267 - Pmf1 protein_coding retained_intron MGP_BALBcJ_T0001321.1 MGP_BALBcJ_G0001244.1 mouse_genomes_project 3 124631526 124633442 + TEC TEC MGP_BALBcJ_T0001322.1 MGP_BALBcJ_G0001245.1 mouse_genomes_project 3 124858069 124859109 - TEC TEC MGP_BALBcJ_T0001297.1 MGP_BALBcJ_G0001220.1 mouse_genomes_project 3 119055960 119058577 + TEC TEC MGP_BALBcJ_T0060561.1 MGP_BALBcJ_G0027147.1 mouse_genomes_project 3 35344535 35380819 - MGP_BALBcJ_P0060561 protein_coding protein_coding MGP_BALBcJ_T0060562.1 MGP_BALBcJ_G0027147.1 mouse_genomes_project 3 35344927 35379066 - MGP_BALBcJ_P0060562 protein_coding protein_coding MGP_BALBcJ_T0060563.1 MGP_BALBcJ_G0027147.1 mouse_genomes_project 3 35347355 35350834 - MGP_BALBcJ_P0060563 protein_coding protein_coding MGP_BALBcJ_T0060564.1 MGP_BALBcJ_G0027147.1 mouse_genomes_project 3 35379225 35380790 - protein_coding processed_transcript MGP_BALBcJ_T0061051.1 MGP_BALBcJ_G0027249.1 mouse_genomes_project 3 63296556 63302453 + MGP_BALBcJ_P0061051 Ptx3 protein_coding protein_coding MGP_BALBcJ_T0061052.1 MGP_BALBcJ_G0027249.1 mouse_genomes_project 3 63296891 63298081 + Ptx3 protein_coding retained_intron MGP_BALBcJ_T0017919.1 MGP_BALBcJ_G0015444.1 mouse_genomes_project 3 49071120 49072505 + Gm38132 processed_transcript lincRNA MGP_BALBcJ_T0017920.1 MGP_BALBcJ_G0015444.1 mouse_genomes_project 3 49071149 49072162 + Gm38132 processed_transcript retained_intron MGP_BALBcJ_T0001153.1 MGP_BALBcJ_G0001078.1 mouse_genomes_project 3 34882496 34883055 + TEC TEC MGP_BALBcJ_T0014344.1 MGP_BALBcJ_G0012441.1 mouse_genomes_project 3 142749884 142750521 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060249.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26775249 26837768 - MGP_BALBcJ_P0060249 Mecom protein_coding protein_coding MGP_BALBcJ_T0060250.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26775252 27337533 - MGP_BALBcJ_P0060250 Mecom protein_coding protein_coding MGP_BALBcJ_T0060251.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26775259 26838117 - MGP_BALBcJ_P0060251 Mecom protein_coding protein_coding MGP_BALBcJ_T0060252.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26775260 26963131 - MGP_BALBcJ_P0060252 Mecom protein_coding protein_coding MGP_BALBcJ_T0060253.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26776520 27060429 - MGP_BALBcJ_P0060253 Mecom protein_coding protein_coding MGP_BALBcJ_T0060254.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26776669 26822306 - MGP_BALBcJ_P0060254 Mecom protein_coding protein_coding MGP_BALBcJ_T0060255.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26776735 26822345 - MGP_BALBcJ_P0060255 Mecom protein_coding protein_coding MGP_BALBcJ_T0060256.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26787019 27337328 - MGP_BALBcJ_P0060256 Mecom protein_coding protein_coding MGP_BALBcJ_T0060257.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26789401 27337622 - MGP_BALBcJ_P0060257 Mecom protein_coding protein_coding MGP_BALBcJ_T0060258.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26801289 27376226 - MGP_BALBcJ_P0060258 Mecom protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060259.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26807902 26837673 - Mecom protein_coding processed_transcript MGP_BALBcJ_T0060260.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26807902 26837816 - Mecom protein_coding retained_intron MGP_BALBcJ_T0060261.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26822371 26836051 - MGP_BALBcJ_P0060261 Mecom protein_coding protein_coding MGP_BALBcJ_T0060262.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 26839577 27337533 - Mecom protein_coding processed_transcript MGP_BALBcJ_T0060263.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 27057700 27060227 - Mecom protein_coding retained_intron MGP_BALBcJ_T0060264.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 27058826 27337301 - Mecom protein_coding processed_transcript MGP_BALBcJ_T0060265.1 MGP_BALBcJ_G0027092.1 mouse_genomes_project 3 27060238 27060586 - MGP_BALBcJ_P0060265 Mecom protein_coding protein_coding MGP_BALBcJ_T0014057.1 MGP_BALBcJ_G0012154.1 mouse_genomes_project 3 59699268 59699850 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060798.1 MGP_BALBcJ_G0027190.1 mouse_genomes_project 3 51714674 51719351 - MGP_BALBcJ_P0060798 Rfxap protein_coding protein_coding MGP_BALBcJ_T0060799.1 MGP_BALBcJ_G0027190.1 mouse_genomes_project 3 51715779 51717327 - Rfxap protein_coding processed_transcript MGP_BALBcJ_T0060800.1 MGP_BALBcJ_G0027190.1 mouse_genomes_project 3 51717334 51718980 - Rfxap protein_coding processed_transcript MGP_BALBcJ_T0001101.1 MGP_BALBcJ_G0001027.1 mouse_genomes_project 3 2049385 2052112 + TEC TEC MGP_BALBcJ_T0001102.1 MGP_BALBcJ_G0001027.1 mouse_genomes_project 3 2051658 2051991 + TEC TEC MGP_BALBcJ_T0001194.1 MGP_BALBcJ_G0001118.1 mouse_genomes_project 3 48788287 48790113 - TEC TEC MGP_BALBcJ_T0001195.1 MGP_BALBcJ_G0001118.1 mouse_genomes_project 3 48788288 48790113 - TEC pseudogene MGP_BALBcJ_T0014091.1 MGP_BALBcJ_G0012188.1 mouse_genomes_project 3 67513457 67514016 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063212.1 MGP_BALBcJ_G0027757.1 mouse_genomes_project 3 106511672 106556097 + MGP_BALBcJ_P0063212 Aknad1 protein_coding protein_coding MGP_BALBcJ_T0063213.1 MGP_BALBcJ_G0027757.1 mouse_genomes_project 3 106516217 106548881 + MGP_BALBcJ_P0063213 Aknad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063214.1 MGP_BALBcJ_G0027757.1 mouse_genomes_project 3 106525889 106535469 + Aknad1 protein_coding retained_intron MGP_BALBcJ_T0063215.1 MGP_BALBcJ_G0027757.1 mouse_genomes_project 3 106533588 106548586 + Aknad1 protein_coding retained_intron MGP_BALBcJ_T0017950.1 MGP_BALBcJ_G0015458.1 mouse_genomes_project 3 106895363 106897726 - Gm43223 processed_transcript lincRNA MGP_BALBcJ_T0017951.1 MGP_BALBcJ_G0015458.1 mouse_genomes_project 3 106895372 106897504 - Gm43223 processed_transcript processed_transcript MGP_BALBcJ_T0004398.1 MGP_BALBcJ_G0003835.1 mouse_genomes_project 3 156128502 156137430 - B230334C09Rik antisense antisense MGP_BALBcJ_T0007489.1 MGP_BALBcJ_G0006135.1 mouse_genomes_project 3 35262601 35266840 + Gm42920 lincRNA lincRNA MGP_BALBcJ_T0061520.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543029 85567932 + MGP_BALBcJ_P0061520 Cct3 protein_coding protein_coding MGP_BALBcJ_T0061521.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543030 85544861 + Cct3 protein_coding retained_intron MGP_BALBcJ_T0061522.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543036 85567672 + Cct3 protein_coding retained_intron MGP_BALBcJ_T0061523.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543039 85560571 + Cct3 protein_coding retained_intron MGP_BALBcJ_T0061524.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543066 85567672 + Cct3 protein_coding retained_intron MGP_BALBcJ_T0061525.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543087 85567931 + MGP_BALBcJ_P0061525 Cct3 protein_coding protein_coding MGP_BALBcJ_T0061526.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85543101 85567672 + MGP_BALBcJ_P0061526 Cct3 protein_coding protein_coding MGP_BALBcJ_T0061527.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85548732 85566815 + MGP_BALBcJ_P0061527 Cct3 protein_coding protein_coding MGP_BALBcJ_T0061528.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85567159 85567929 + Cct3 protein_coding retained_intron MGP_BALBcJ_T0061529.1 MGP_BALBcJ_G0027361.1 mouse_genomes_project 3 85567212 85567930 + MGP_BALBcJ_P0061529 Cct3 protein_coding protein_coding MGP_BALBcJ_T0062022.1 MGP_BALBcJ_G0027439.1 mouse_genomes_project 3 87735196 87737600 - Snapin protein_coding retained_intron MGP_BALBcJ_T0062023.1 MGP_BALBcJ_G0027439.1 mouse_genomes_project 3 87735204 87738205 - MGP_BALBcJ_P0062023 Snapin protein_coding protein_coding MGP_BALBcJ_T0062024.1 MGP_BALBcJ_G0027439.1 mouse_genomes_project 3 87735540 87738165 - MGP_BALBcJ_P0062024 Snapin protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062025.1 MGP_BALBcJ_G0027439.1 mouse_genomes_project 3 87735543 87738196 - MGP_BALBcJ_P0062025 Snapin protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062026.1 MGP_BALBcJ_G0027439.1 mouse_genomes_project 3 87736171 87737964 - Snapin protein_coding retained_intron MGP_BALBcJ_T0062578.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94417904 94446251 + MGP_BALBcJ_P0062578 Pdzk1 protein_coding protein_coding MGP_BALBcJ_T0062579.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94418083 94446336 + MGP_BALBcJ_P0062579 Pdzk1 protein_coding protein_coding MGP_BALBcJ_T0062580.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94418696 94462991 + MGP_BALBcJ_P0062580 Pdzk1 protein_coding protein_coding MGP_BALBcJ_T0062581.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94420774 94462811 + MGP_BALBcJ_P0062581 Pdzk1 protein_coding protein_coding MGP_BALBcJ_T0062582.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94420791 94462537 + MGP_BALBcJ_P0062582 Pdzk1 protein_coding protein_coding MGP_BALBcJ_T0062583.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94420791 94462661 + MGP_BALBcJ_P0062583 Pdzk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062584.1 MGP_BALBcJ_G0027606.1 mouse_genomes_project 3 94421846 94444975 + MGP_BALBcJ_P0062584 Pdzk1 protein_coding protein_coding MGP_BALBcJ_T0014058.1 MGP_BALBcJ_G0012155.1 mouse_genomes_project 3 59860390 59860992 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063727.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128055483 128106835 + Col25a1 protein_coding processed_transcript MGP_BALBcJ_T0063728.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128104843 128471893 + Col25a1 protein_coding retained_intron MGP_BALBcJ_T0063729.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128104843 128520732 + MGP_BALBcJ_P0063729 Col25a1 protein_coding protein_coding MGP_BALBcJ_T0063730.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128104843 128515987 + MGP_BALBcJ_P0063730 Col25a1 protein_coding protein_coding MGP_BALBcJ_T0063731.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128104843 128517176 + MGP_BALBcJ_P0063731 Col25a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063732.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128105436 128520742 + MGP_BALBcJ_P0063732 Col25a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0063733.1 MGP_BALBcJ_G0027851.1 mouse_genomes_project 3 128405714 128408453 + Col25a1 protein_coding retained_intron MGP_BALBcJ_T0061544.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85582531 85609397 + MGP_BALBcJ_P0061544 Smg5 protein_coding protein_coding MGP_BALBcJ_T0061545.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85582582 85599788 + Smg5 protein_coding retained_intron MGP_BALBcJ_T0061546.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85582636 85589433 + Smg5 protein_coding retained_intron MGP_BALBcJ_T0061547.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85586836 85593713 + Smg5 protein_coding processed_transcript MGP_BALBcJ_T0061548.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85588557 85597790 + MGP_BALBcJ_P0061548 Smg5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061549.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85599549 85601696 + Smg5 protein_coding retained_intron MGP_BALBcJ_T0061550.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85605252 85606696 + Smg5 protein_coding retained_intron MGP_BALBcJ_T0061551.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85605405 85608329 + Smg5 protein_coding processed_transcript MGP_BALBcJ_T0061552.1 MGP_BALBcJ_G0027364.1 mouse_genomes_project 3 85607594 85608150 + Smg5 protein_coding retained_intron MGP_BALBcJ_T0013912.1 MGP_BALBcJ_G0012009.1 mouse_genomes_project 3 11674762 11674981 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007731.1 MGP_BALBcJ_G0006322.1 mouse_genomes_project 3 144321962 144333725 - Gm10636 lincRNA lincRNA MGP_BALBcJ_T0062723.1 MGP_BALBcJ_G0027647.1 mouse_genomes_project 3 99057420 99059878 + Igsf3 protein_coding retained_intron MGP_BALBcJ_T0062724.1 MGP_BALBcJ_G0027647.1 mouse_genomes_project 3 99057420 99144279 + MGP_BALBcJ_P0062724 Igsf3 protein_coding protein_coding MGP_BALBcJ_T0062725.1 MGP_BALBcJ_G0027647.1 mouse_genomes_project 3 99058675 99141386 + MGP_BALBcJ_P0062725 Igsf3 protein_coding protein_coding MGP_BALBcJ_T0001277.1 MGP_BALBcJ_G0001200.1 mouse_genomes_project 3 104303396 104305429 + TEC TEC MGP_BALBcJ_T0014218.1 MGP_BALBcJ_G0012315.1 mouse_genomes_project 3 103825544 103825860 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007605.1 MGP_BALBcJ_G0006218.1 mouse_genomes_project 3 95498424 95507281 - Gm15999 lincRNA lincRNA MGP_BALBcJ_T0014211.1 MGP_BALBcJ_G0012308.1 mouse_genomes_project 3 101849585 101850423 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061282.1 MGP_BALBcJ_G0027303.1 mouse_genomes_project 3 80077774 80089427 - MGP_BALBcJ_P0061282 Lrat protein_coding protein_coding MGP_BALBcJ_T0007725.1 MGP_BALBcJ_G0006317.1 mouse_genomes_project 3 141958106 141994987 - Gm42709 lincRNA lincRNA MGP_BALBcJ_T0014022.1 MGP_BALBcJ_G0012119.1 mouse_genomes_project 3 49859955 49860274 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061477.1 MGP_BALBcJ_G0027348.1 mouse_genomes_project 3 85167197 85177575 + MGP_BALBcJ_P0061477 Isg20l2 protein_coding protein_coding MGP_BALBcJ_T0001207.1 MGP_BALBcJ_G0001130.1 mouse_genomes_project 3 50404952 50406143 + TEC TEC MGP_BALBcJ_T0102486.1 MGP_BALBcJ_G0040302.1 mouse_genomes_project 3 96350174 96357679 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007726.1 MGP_BALBcJ_G0006318.1 mouse_genomes_project 3 142143619 142144715 + Gm43446 lincRNA lincRNA MGP_BALBcJ_T0007474.1 MGP_BALBcJ_G0006122.1 mouse_genomes_project 3 31404759 31410146 - Gm43207 lincRNA lincRNA MGP_BALBcJ_T0001335.1 MGP_BALBcJ_G0001258.1 mouse_genomes_project 3 125769609 125770281 - TEC TEC MGP_BALBcJ_T0001247.1 MGP_BALBcJ_G0001170.1 mouse_genomes_project 3 81242946 81247432 - TEC TEC MGP_BALBcJ_T0004217.1 MGP_BALBcJ_G0003711.1 mouse_genomes_project 3 38379212 38380632 - Gm31266 antisense antisense MGP_BALBcJ_T0060379.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29789996 29925289 - MGP_BALBcJ_P0060379 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060380.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29789996 29924297 - MGP_BALBcJ_P0060380 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060381.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29789996 29925289 - MGP_BALBcJ_P0060381 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060382.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29789996 29925289 - MGP_BALBcJ_P0060382 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060383.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29789996 29925289 - MGP_BALBcJ_P0060383 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060384.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29790222 29925258 - MGP_BALBcJ_P0060384 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060385.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29790542 29986130 - MGP_BALBcJ_P0060385 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060386.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29790542 29925264 - MGP_BALBcJ_P0060386 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060387.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29791218 29826426 - MGP_BALBcJ_P0060387 Pex5l protein_coding protein_coding MGP_BALBcJ_T0060388.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29794925 29986295 - Pex5l protein_coding retained_intron MGP_BALBcJ_T0060389.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29974719 29986124 - Pex5l protein_coding processed_transcript MGP_BALBcJ_T0060390.1 MGP_BALBcJ_G0027117.1 mouse_genomes_project 3 29983017 29986231 - Pex5l protein_coding retained_intron MGP_BALBcJ_T0099807.1 MGP_BALBcJ_G0037843.1 mouse_genomes_project 3 155453531 155453638 - Gm23379 snRNA snRNA MGP_BALBcJ_T0064488.1 MGP_BALBcJ_G0027989.1 mouse_genomes_project 3 157652378 157683788 + MGP_BALBcJ_P0064488 Rpe65 protein_coding protein_coding MGP_BALBcJ_T0064489.1 MGP_BALBcJ_G0027989.1 mouse_genomes_project 3 157652421 157659602 + MGP_BALBcJ_P0064489 Rpe65 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064490.1 MGP_BALBcJ_G0027989.1 mouse_genomes_project 3 157652436 157683356 + MGP_BALBcJ_P0064490 Rpe65 protein_coding protein_coding MGP_BALBcJ_T0004287.1 MGP_BALBcJ_G0003761.1 mouse_genomes_project 3 93750244 93761558 - Gm15444 antisense antisense MGP_BALBcJ_T0014084.1 MGP_BALBcJ_G0012181.1 mouse_genomes_project 3 66651113 66652085 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062240.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92481476 92513629 + MGP_BALBcJ_P0062240 Pi4kb protein_coding protein_coding MGP_BALBcJ_T0062241.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92481576 92512930 + MGP_BALBcJ_P0062241 Pi4kb protein_coding protein_coding MGP_BALBcJ_T0062242.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92481621 92512926 + MGP_BALBcJ_P0062242 Pi4kb protein_coding protein_coding MGP_BALBcJ_T0062243.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92482861 92513567 + MGP_BALBcJ_P0062243 Pi4kb protein_coding protein_coding MGP_BALBcJ_T0062244.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92482888 92502725 + MGP_BALBcJ_P0062244 Pi4kb protein_coding protein_coding MGP_BALBcJ_T0062245.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92505709 92512959 + MGP_BALBcJ_P0062245 Pi4kb protein_coding protein_coding MGP_BALBcJ_T0062246.1 MGP_BALBcJ_G0027534.1 mouse_genomes_project 3 92511093 92513027 + Pi4kb protein_coding processed_transcript MGP_BALBcJ_T0010539.1 MGP_BALBcJ_G0008664.1 mouse_genomes_project 3 132005353 132005447 - Gm44361 miRNA miRNA MGP_BALBcJ_T0010546.1 MGP_BALBcJ_G0008671.1 mouse_genomes_project 3 140464104 140464191 - Mir6381 miRNA miRNA MGP_BALBcJ_T0004184.1 MGP_BALBcJ_G0003689.1 mouse_genomes_project 3 4428740 4516333 + Gm16685 antisense antisense MGP_BALBcJ_T0001139.1 MGP_BALBcJ_G0001064.1 mouse_genomes_project 3 31473064 31473695 - TEC TEC MGP_BALBcJ_T0061615.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85870755 85878143 + Arhgef2 protein_coding processed_transcript MGP_BALBcJ_T0061616.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85870960 85880907 + Arhgef2 protein_coding processed_transcript MGP_BALBcJ_T0061617.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85871092 85910377 + MGP_BALBcJ_P0061617 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061618.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85877986 85881069 + Arhgef2 protein_coding processed_transcript MGP_BALBcJ_T0061619.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85878174 85897310 + MGP_BALBcJ_P0061619 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061620.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85878932 85898209 + MGP_BALBcJ_P0061620 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061621.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85879710 85911494 + MGP_BALBcJ_P0061621 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061622.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85879710 85910980 + MGP_BALBcJ_P0061622 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061623.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85880084 85910343 + MGP_BALBcJ_P0061623 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061624.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85884823 85910311 + MGP_BALBcJ_P0061624 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061625.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85884836 85902983 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061626.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85884957 85911500 + MGP_BALBcJ_P0061626 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061627.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85884990 85911492 + MGP_BALBcJ_P0061627 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061628.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85885158 85898172 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061629.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85885246 85896775 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061630.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85886157 85896641 + MGP_BALBcJ_P0061630 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061631.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85886618 85904154 + MGP_BALBcJ_P0061631 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061632.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85887059 85897332 + MGP_BALBcJ_P0061632 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061633.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85893156 85896691 + MGP_BALBcJ_P0061633 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061634.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85893183 85895816 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061635.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85893187 85896707 + MGP_BALBcJ_P0061635 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061636.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85893285 85896049 + MGP_BALBcJ_P0061636 Arhgef2 protein_coding protein_coding MGP_BALBcJ_T0061637.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85895625 85898372 + Arhgef2 protein_coding processed_transcript MGP_BALBcJ_T0061638.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85895910 85897305 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061639.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85896447 85897353 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061640.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85896632 85901312 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061641.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85898032 85898786 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061642.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85905889 85907373 + Arhgef2 protein_coding retained_intron MGP_BALBcJ_T0061643.1 MGP_BALBcJ_G0027377.1 mouse_genomes_project 3 85907392 85910413 + Arhgef2 protein_coding processed_transcript MGP_BALBcJ_T0013867.1 MGP_BALBcJ_G0011964.1 mouse_genomes_project 3 74548 75299 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060523.1 MGP_BALBcJ_G0027138.1 mouse_genomes_project 3 34020816 34026126 - MGP_BALBcJ_P0060523 Il2 protein_coding protein_coding MGP_BALBcJ_T0013992.1 MGP_BALBcJ_G0012089.1 mouse_genomes_project 3 40198128 40199299 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004301.1 MGP_BALBcJ_G0003771.1 mouse_genomes_project 3 100412304 100428938 - Tspan2os antisense antisense MGP_BALBcJ_T0014103.1 MGP_BALBcJ_G0012200.1 mouse_genomes_project 3 71948581 71949206 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001298.1 MGP_BALBcJ_G0001221.1 mouse_genomes_project 3 119314896 119318242 - TEC TEC MGP_BALBcJ_T0007573.1 MGP_BALBcJ_G0006198.1 mouse_genomes_project 3 83350316 83353116 + Gm37933 lincRNA lincRNA MGP_BALBcJ_T0064005.1 MGP_BALBcJ_G0027906.1 mouse_genomes_project 3 139045734 139048086 - MGP_BALBcJ_P0064005 Pdha2 protein_coding protein_coding MGP_BALBcJ_T0014343.1 MGP_BALBcJ_G0012440.1 mouse_genomes_project 3 142656769 142658444 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063151.1 MGP_BALBcJ_G0027745.1 mouse_genomes_project 3 106044835 106122240 + MGP_BALBcJ_P0063151 Sort1 protein_coding protein_coding MGP_BALBcJ_T0063152.1 MGP_BALBcJ_G0027745.1 mouse_genomes_project 3 106044844 106122308 + MGP_BALBcJ_P0063152 Sort1 protein_coding protein_coding MGP_BALBcJ_T0063153.1 MGP_BALBcJ_G0027745.1 mouse_genomes_project 3 106116263 106122235 + Sort1 protein_coding retained_intron MGP_BALBcJ_T0007662.1 MGP_BALBcJ_G0006262.1 mouse_genomes_project 3 122107948 122176010 + Gm43731 lincRNA lincRNA MGP_BALBcJ_T0001333.1 MGP_BALBcJ_G0001256.1 mouse_genomes_project 3 125632478 125634464 - TEC TEC MGP_BALBcJ_T0004363.1 MGP_BALBcJ_G0003810.1 mouse_genomes_project 3 133316525 133318982 - 4930539J05Rik antisense antisense MGP_BALBcJ_T0004364.1 MGP_BALBcJ_G0003810.1 mouse_genomes_project 3 133316542 133318076 - 4930539J05Rik antisense antisense MGP_BALBcJ_T0007657.1 MGP_BALBcJ_G0006259.1 mouse_genomes_project 3 119603817 119604635 - Gm43607 lincRNA lincRNA MGP_BALBcJ_T0007675.1 MGP_BALBcJ_G0006273.1 mouse_genomes_project 3 128756986 128760440 - lincRNA lincRNA MGP_BALBcJ_T0014190.1 MGP_BALBcJ_G0012287.1 mouse_genomes_project 3 97184191 97184896 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063827.1 MGP_BALBcJ_G0027871.1 mouse_genomes_project 3 132094045 132117595 + Cxxc4 protein_coding processed_transcript MGP_BALBcJ_T0063828.1 MGP_BALBcJ_G0027871.1 mouse_genomes_project 3 132094052 132120136 + MGP_BALBcJ_P0063828 Cxxc4 protein_coding protein_coding MGP_BALBcJ_T0063829.1 MGP_BALBcJ_G0027871.1 mouse_genomes_project 3 132094056 132095947 + Cxxc4 protein_coding retained_intron MGP_BALBcJ_T0063830.1 MGP_BALBcJ_G0027871.1 mouse_genomes_project 3 132094381 132116206 + MGP_BALBcJ_P0063830 Cxxc4 protein_coding protein_coding MGP_BALBcJ_T0063831.1 MGP_BALBcJ_G0027871.1 mouse_genomes_project 3 132098224 132104550 + Cxxc4 protein_coding retained_intron MGP_BALBcJ_T0010486.1 MGP_BALBcJ_G0008611.1 mouse_genomes_project 3 26458106 26458214 + Mir21b miRNA miRNA MGP_BALBcJ_T0098585.1 MGP_BALBcJ_G0036639.1 mouse_genomes_project 3 6665838 6665947 - Gm24786 rRNA rRNA MGP_BALBcJ_T0001257.1 MGP_BALBcJ_G0001180.1 mouse_genomes_project 3 89590098 89612529 - TEC TEC MGP_BALBcJ_T0060969.1 MGP_BALBcJ_G0027231.1 mouse_genomes_project 3 59276904 59398613 + MGP_BALBcJ_P0060969 Arhgef26 protein_coding protein_coding MGP_BALBcJ_T0060970.1 MGP_BALBcJ_G0027231.1 mouse_genomes_project 3 59277559 59315360 + Arhgef26 protein_coding processed_transcript MGP_BALBcJ_T0060971.1 MGP_BALBcJ_G0027231.1 mouse_genomes_project 3 59278950 59313758 + Arhgef26 protein_coding retained_intron MGP_BALBcJ_T0060972.1 MGP_BALBcJ_G0027231.1 mouse_genomes_project 3 59279661 59316632 + Arhgef26 protein_coding processed_transcript MGP_BALBcJ_T0060973.1 MGP_BALBcJ_G0027231.1 mouse_genomes_project 3 59355539 59396604 + MGP_BALBcJ_P0060973 Arhgef26 protein_coding protein_coding MGP_BALBcJ_T0060974.1 MGP_BALBcJ_G0027231.1 mouse_genomes_project 3 59363697 59366529 + Arhgef26 protein_coding retained_intron MGP_BALBcJ_T0060729.1 MGP_BALBcJ_G0027176.1 mouse_genomes_project 3 49944143 50157000 + MGP_BALBcJ_P0060729 Lhfp protein_coding protein_coding MGP_BALBcJ_T0060730.1 MGP_BALBcJ_G0027176.1 mouse_genomes_project 3 49944174 50156996 + Lhfp protein_coding processed_transcript MGP_BALBcJ_T0060731.1 MGP_BALBcJ_G0027176.1 mouse_genomes_project 3 49944198 50157000 + MGP_BALBcJ_P0060731 Lhfp protein_coding protein_coding MGP_BALBcJ_T0060732.1 MGP_BALBcJ_G0027176.1 mouse_genomes_project 3 50124648 50127754 + Lhfp protein_coding retained_intron MGP_BALBcJ_T0007575.1 MGP_BALBcJ_G0006200.1 mouse_genomes_project 3 85439975 85445469 - AI849053 lincRNA lincRNA MGP_BALBcJ_T0098909.1 MGP_BALBcJ_G0036956.1 mouse_genomes_project 3 101776910 101778051 - Gm42696 sense_intronic sense_intronic MGP_BALBcJ_T0007676.1 MGP_BALBcJ_G0006274.1 mouse_genomes_project 3 128785758 128787257 + Gm36520 lincRNA lincRNA MGP_BALBcJ_T0007475.1 MGP_BALBcJ_G0006123.1 mouse_genomes_project 3 31509507 31526498 - Gm3143 lincRNA lincRNA MGP_BALBcJ_T0007476.1 MGP_BALBcJ_G0006123.1 mouse_genomes_project 3 31519469 31526500 - Gm3143 lincRNA lincRNA MGP_BALBcJ_T0102457.1 MGP_BALBcJ_G0040273.1 mouse_genomes_project 3 56366399 56390731 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0060082.1 MGP_BALBcJ_G0027062.1 mouse_genomes_project 3 16016369 16049821 - MGP_BALBcJ_P0060082 Armc1 protein_coding protein_coding MGP_BALBcJ_T0001127.1 MGP_BALBcJ_G0001052.1 mouse_genomes_project 3 27418723 27419613 - TEC TEC MGP_BALBcJ_T0001373.1 MGP_BALBcJ_G0001295.1 mouse_genomes_project 3 149867498 149870945 + TEC TEC MGP_BALBcJ_T0061489.1 MGP_BALBcJ_G0027352.1 mouse_genomes_project 3 85259896 85265729 - Hapln2 protein_coding retained_intron MGP_BALBcJ_T0061490.1 MGP_BALBcJ_G0027352.1 mouse_genomes_project 3 85260207 85265624 - MGP_BALBcJ_P0061490 Hapln2 protein_coding protein_coding MGP_BALBcJ_T0061491.1 MGP_BALBcJ_G0027352.1 mouse_genomes_project 3 85260784 85261820 - Hapln2 protein_coding retained_intron MGP_BALBcJ_T0061492.1 MGP_BALBcJ_G0027352.1 mouse_genomes_project 3 85261680 85265638 - MGP_BALBcJ_P0061492 Hapln2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102492.1 MGP_BALBcJ_G0040308.1 mouse_genomes_project 3 104092128 104093230 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007432.1 MGP_BALBcJ_G0006091.1 mouse_genomes_project 3 10288947 10290085 + lincRNA lincRNA MGP_BALBcJ_T0007433.1 MGP_BALBcJ_G0006091.1 mouse_genomes_project 3 10288974 10290086 + lincRNA lincRNA MGP_BALBcJ_T0007434.1 MGP_BALBcJ_G0006091.1 mouse_genomes_project 3 10289020 10289873 + lincRNA lincRNA MGP_BALBcJ_T0007436.1 MGP_BALBcJ_G0006091.1 mouse_genomes_project 3 10289198 10291889 + lincRNA lincRNA MGP_BALBcJ_T0013881.1 MGP_BALBcJ_G0011978.1 mouse_genomes_project 3 4224813 4224933 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063817.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131305438 131386778 - MGP_BALBcJ_P0063817 Tet2 protein_coding protein_coding MGP_BALBcJ_T0063818.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131305442 131318232 - Tet2 protein_coding retained_intron MGP_BALBcJ_T0063819.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131305598 131386756 - MGP_BALBcJ_P0063819 Tet2 protein_coding protein_coding MGP_BALBcJ_T0063820.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131309257 131315228 - Tet2 protein_coding retained_intron MGP_BALBcJ_T0063821.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131310937 131319983 - MGP_BALBcJ_P0063821 Tet2 protein_coding protein_coding MGP_BALBcJ_T0063822.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131318487 131322339 - Tet2 protein_coding retained_intron MGP_BALBcJ_T0063823.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131322468 131324093 - Tet2 protein_coding retained_intron MGP_BALBcJ_T0063824.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131331929 131387527 - MGP_BALBcJ_P0063824 Tet2 protein_coding protein_coding MGP_BALBcJ_T0063825.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131356413 131386690 - Tet2 protein_coding retained_intron MGP_BALBcJ_T0063826.1 MGP_BALBcJ_G0027870.1 mouse_genomes_project 3 131381153 131386674 - Tet2 protein_coding processed_transcript MGP_BALBcJ_T0014256.1 MGP_BALBcJ_G0012353.1 mouse_genomes_project 3 114888480 114889210 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060495.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33764589 33791873 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060496.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33764591 33953613 + MGP_BALBcJ_P0060496 4932438A13Rik protein_coding protein_coding MGP_BALBcJ_T0060497.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33764606 33790577 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060498.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33764606 33838471 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060499.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33764620 33953600 + MGP_BALBcJ_P0060499 4932438A13Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0060500.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33764641 33843227 + MGP_BALBcJ_P0060500 4932438A13Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060501.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33765954 33827159 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060502.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33771472 33953613 + MGP_BALBcJ_P0060502 4932438A13Rik protein_coding protein_coding MGP_BALBcJ_T0060503.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33771485 33790584 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060504.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33792350 33796995 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060505.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33796904 33843229 + MGP_BALBcJ_P0060505 4932438A13Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060506.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33803851 33815538 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060507.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33841295 33843224 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060508.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33906201 33953595 + MGP_BALBcJ_P0060508 4932438A13Rik protein_coding protein_coding MGP_BALBcJ_T0060509.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33910592 33953596 + MGP_BALBcJ_P0060509 4932438A13Rik protein_coding protein_coding MGP_BALBcJ_T0060510.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33910723 33953594 + MGP_BALBcJ_P0060510 4932438A13Rik protein_coding protein_coding MGP_BALBcJ_T0060511.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33913519 33929383 + MGP_BALBcJ_P0060511 4932438A13Rik protein_coding protein_coding MGP_BALBcJ_T0060512.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33918244 33923243 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060513.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33919567 33923473 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060514.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33923814 33937197 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060515.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33937179 33940237 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060516.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33937826 33940239 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0060517.1 MGP_BALBcJ_G0027136.1 mouse_genomes_project 3 33942337 33945087 + 4932438A13Rik protein_coding retained_intron MGP_BALBcJ_T0063752.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129033685 129148335 + MGP_BALBcJ_P0063752 Lef1 protein_coding protein_coding MGP_BALBcJ_T0063753.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129033685 129148335 + MGP_BALBcJ_P0063753 Lef1 protein_coding protein_coding MGP_BALBcJ_T0063754.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129033685 129148335 + MGP_BALBcJ_P0063754 Lef1 protein_coding protein_coding MGP_BALBcJ_T0063755.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129036017 129040608 + Lef1 protein_coding retained_intron MGP_BALBcJ_T0063756.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129036017 129148335 + MGP_BALBcJ_P0063756 Lef1 protein_coding protein_coding MGP_BALBcJ_T0063757.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129036026 129112468 + Lef1 protein_coding retained_intron MGP_BALBcJ_T0063758.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129037034 129109119 + Lef1 protein_coding retained_intron MGP_BALBcJ_T0063759.1 MGP_BALBcJ_G0027856.1 mouse_genomes_project 3 129037076 129128646 + Lef1 protein_coding processed_transcript MGP_BALBcJ_T0011520.1 MGP_BALBcJ_G0009645.1 mouse_genomes_project 3 70327353 70327652 - Gm22538 misc_RNA misc_RNA MGP_BALBcJ_T0001393.1 MGP_BALBcJ_G0001315.1 mouse_genomes_project 3 155948037 155950268 - TEC TEC MGP_BALBcJ_T0101054.1 MGP_BALBcJ_G0039090.1 mouse_genomes_project 3 85968763 85968898 + Gm25945 snoRNA snoRNA MGP_BALBcJ_T0063555.1 MGP_BALBcJ_G0027823.1 mouse_genomes_project 3 122177875 122181764 + MGP_BALBcJ_P0063555 Tram1l1 protein_coding protein_coding MGP_BALBcJ_T0014315.1 MGP_BALBcJ_G0012412.1 mouse_genomes_project 3 134212678 134214183 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062604.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94803771 94827483 - MGP_BALBcJ_P0062604 Bcl9 protein_coding protein_coding MGP_BALBcJ_T0062605.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94804737 94816626 - MGP_BALBcJ_P0062605 Bcl9 protein_coding protein_coding MGP_BALBcJ_T0062606.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94810572 94814119 - Bcl9 protein_coding processed_transcript MGP_BALBcJ_T0062607.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94814608 94828740 - Bcl9 protein_coding retained_intron MGP_BALBcJ_T0062608.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94816646 94829256 - Bcl9 protein_coding processed_transcript MGP_BALBcJ_T0062609.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94816671 94894692 - Bcl9 protein_coding processed_transcript MGP_BALBcJ_T0062610.1 MGP_BALBcJ_G0027611.1 mouse_genomes_project 3 94821943 94824328 - Bcl9 protein_coding retained_intron MGP_BALBcJ_T0013941.1 MGP_BALBcJ_G0012038.1 mouse_genomes_project 3 22006010 22006190 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060697.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48289252 48345025 + Naa15 protein_coding processed_transcript MGP_BALBcJ_T0060698.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48289279 48349443 + MGP_BALBcJ_P0060698 Naa15 protein_coding protein_coding MGP_BALBcJ_T0060699.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48289570 48316336 + MGP_BALBcJ_P0060699 Naa15 protein_coding protein_coding MGP_BALBcJ_T0060700.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48314399 48317364 + Naa15 protein_coding retained_intron MGP_BALBcJ_T0060701.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48315388 48322026 + MGP_BALBcJ_P0060701 Naa15 protein_coding protein_coding MGP_BALBcJ_T0060702.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48333193 48336777 + Naa15 protein_coding retained_intron MGP_BALBcJ_T0060703.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48334194 48336513 + Naa15 protein_coding retained_intron MGP_BALBcJ_T0060704.1 MGP_BALBcJ_G0027169.1 mouse_genomes_project 3 48342600 48345673 + Naa15 protein_coding retained_intron MGP_BALBcJ_T0063053.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105203868 105254304 - MGP_BALBcJ_P0063053 Slc6a17 protein_coding protein_coding MGP_BALBcJ_T0063054.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105203873 105254304 - MGP_BALBcJ_P0063054 Slc6a17 protein_coding protein_coding MGP_BALBcJ_T0063055.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105203874 105236758 - MGP_BALBcJ_P0063055 Slc6a17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063056.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105203876 105205031 - Slc6a17 protein_coding processed_transcript MGP_BALBcJ_T0063057.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105218310 105254035 - Slc6a17 protein_coding processed_transcript MGP_BALBcJ_T0063058.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105225996 105229422 - Slc6a17 protein_coding processed_transcript MGP_BALBcJ_T0063059.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105225998 105254304 - Slc6a17 protein_coding retained_intron MGP_BALBcJ_T0063060.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105231941 105254231 - Slc6a17 protein_coding processed_transcript MGP_BALBcJ_T0063061.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105231987 105253623 - MGP_BALBcJ_P0063061 Slc6a17 protein_coding protein_coding MGP_BALBcJ_T0063062.1 MGP_BALBcJ_G0027721.1 mouse_genomes_project 3 105236898 105253613 - Slc6a17 protein_coding processed_transcript MGP_BALBcJ_T0007612.1 MGP_BALBcJ_G0006225.1 mouse_genomes_project 3 99378679 99386525 + Gm43135 lincRNA lincRNA MGP_BALBcJ_T0007497.1 MGP_BALBcJ_G0006140.1 mouse_genomes_project 3 38102909 38107432 - Gm16508 lincRNA lincRNA MGP_BALBcJ_T0064091.1 MGP_BALBcJ_G0027923.1 mouse_genomes_project 3 142690005 142732160 - MGP_BALBcJ_P0064091 protein_coding protein_coding MGP_BALBcJ_T0001348.1 MGP_BALBcJ_G0001270.1 mouse_genomes_project 3 128943685 128946217 - TEC TEC MGP_BALBcJ_T0001157.1 MGP_BALBcJ_G0001082.1 mouse_genomes_project 3 37821790 37825436 + TEC TEC MGP_BALBcJ_T0007625.1 MGP_BALBcJ_G0006236.1 mouse_genomes_project 3 103551366 103553246 + Gm5547 lincRNA lincRNA MGP_BALBcJ_T0007626.1 MGP_BALBcJ_G0006236.1 mouse_genomes_project 3 103551393 103553239 + Gm5547 lincRNA lincRNA MGP_BALBcJ_T0007627.1 MGP_BALBcJ_G0006236.1 mouse_genomes_project 3 103552480 103553247 + Gm5547 lincRNA lincRNA MGP_BALBcJ_T0007512.1 MGP_BALBcJ_G0006149.1 mouse_genomes_project 3 48247893 48256432 + Gm5103 lincRNA lincRNA MGP_BALBcJ_T0007513.1 MGP_BALBcJ_G0006149.1 mouse_genomes_project 3 48247945 48256439 + Gm5103 lincRNA lincRNA MGP_BALBcJ_T0014177.1 MGP_BALBcJ_G0012274.1 mouse_genomes_project 3 93629780 93629966 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001167.1 MGP_BALBcJ_G0001092.1 mouse_genomes_project 3 42280463 42283601 + TEC TEC MGP_BALBcJ_T0004254.1 MGP_BALBcJ_G0003740.1 mouse_genomes_project 3 85412346 85418552 - 1700113A16Rik antisense antisense MGP_BALBcJ_T0004255.1 MGP_BALBcJ_G0003740.1 mouse_genomes_project 3 85412346 85418645 - 1700113A16Rik antisense antisense MGP_BALBcJ_T0004256.1 MGP_BALBcJ_G0003740.1 mouse_genomes_project 3 85412799 85418566 - 1700113A16Rik antisense antisense MGP_BALBcJ_T0013986.1 MGP_BALBcJ_G0012083.1 mouse_genomes_project 3 37612585 37612856 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001245.1 MGP_BALBcJ_G0001168.1 mouse_genomes_project 3 76754496 76755785 - TEC TEC MGP_BALBcJ_T0001143.1 MGP_BALBcJ_G0001068.1 mouse_genomes_project 3 32855855 32858498 - TEC TEC MGP_BALBcJ_T0101014.1 MGP_BALBcJ_G0039050.1 mouse_genomes_project 3 1385487 1385620 - Gm22944 snoRNA snoRNA MGP_BALBcJ_T0014080.1 MGP_BALBcJ_G0012177.1 mouse_genomes_project 3 65912280 65913440 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098939.1 MGP_BALBcJ_G0036986.1 mouse_genomes_project 3 151480811 151491806 - 1700015C17Rik sense_intronic sense_intronic MGP_BALBcJ_T0064428.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155589460 155603651 + MGP_BALBcJ_P0064428 Zranb2 protein_coding protein_coding MGP_BALBcJ_T0064429.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155589659 155603577 + MGP_BALBcJ_P0064429 Zranb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064430.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155589659 155603577 + MGP_BALBcJ_P0064430 Zranb2 protein_coding protein_coding MGP_BALBcJ_T0064431.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155589676 155598445 + MGP_BALBcJ_P0064431 Zranb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064432.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155589688 155603617 + MGP_BALBcJ_P0064432 Zranb2 protein_coding protein_coding MGP_BALBcJ_T0064433.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155589725 155602164 + Zranb2 protein_coding retained_intron MGP_BALBcJ_T0064434.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155594293 155597009 + Zranb2 protein_coding retained_intron MGP_BALBcJ_T0064435.1 MGP_BALBcJ_G0027981.1 mouse_genomes_project 3 155595894 155602044 + MGP_BALBcJ_P0064435 Zranb2 protein_coding protein_coding MGP_BALBcJ_T0062109.1 MGP_BALBcJ_G0027491.1 mouse_genomes_project 3 90111140 90112830 - MGP_BALBcJ_P0062109 Lce1i protein_coding protein_coding MGP_BALBcJ_T0062113.1 MGP_BALBcJ_G0027494.1 mouse_genomes_project 3 90159107 90163323 - MGP_BALBcJ_P0062113 Kprp protein_coding protein_coding MGP_BALBcJ_T0001273.1 MGP_BALBcJ_G0001196.1 mouse_genomes_project 3 95730842 95733905 + TEC TEC MGP_BALBcJ_T0101064.1 MGP_BALBcJ_G0039100.1 mouse_genomes_project 3 101103163 101103265 + Gm25009 snoRNA snoRNA MGP_BALBcJ_T0014294.1 MGP_BALBcJ_G0012391.1 mouse_genomes_project 3 129211085 129212099 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062726.1 MGP_BALBcJ_G0027648.1 mouse_genomes_project 3 99260883 99289342 - MGP_BALBcJ_P0062726 Atp1a1 protein_coding protein_coding MGP_BALBcJ_T0062727.1 MGP_BALBcJ_G0027648.1 mouse_genomes_project 3 99260980 99262227 - Atp1a1 protein_coding retained_intron MGP_BALBcJ_T0062728.1 MGP_BALBcJ_G0027648.1 mouse_genomes_project 3 99270456 99273698 - Atp1a1 protein_coding retained_intron MGP_BALBcJ_T0062655.1 MGP_BALBcJ_G0027627.1 mouse_genomes_project 3 96175982 96187441 - MGP_BALBcJ_P0062655 protein_coding protein_coding MGP_BALBcJ_T0063734.1 MGP_BALBcJ_G0027852.1 mouse_genomes_project 3 128538276 128559402 + MGP_BALBcJ_P0063734 Etnppl protein_coding protein_coding MGP_BALBcJ_T0063735.1 MGP_BALBcJ_G0027852.1 mouse_genomes_project 3 128538397 128562114 + MGP_BALBcJ_P0063735 Etnppl protein_coding protein_coding MGP_BALBcJ_T0063736.1 MGP_BALBcJ_G0027852.1 mouse_genomes_project 3 128538400 128546221 + Etnppl protein_coding retained_intron MGP_BALBcJ_T0063737.1 MGP_BALBcJ_G0027852.1 mouse_genomes_project 3 128538427 128546243 + Etnppl protein_coding retained_intron MGP_BALBcJ_T0063738.1 MGP_BALBcJ_G0027852.1 mouse_genomes_project 3 128538521 128559270 + MGP_BALBcJ_P0063738 Etnppl protein_coding protein_coding MGP_BALBcJ_T0063739.1 MGP_BALBcJ_G0027852.1 mouse_genomes_project 3 128551112 128554317 + MGP_BALBcJ_P0063739 Etnppl protein_coding protein_coding MGP_BALBcJ_T0061072.1 MGP_BALBcJ_G0027253.1 mouse_genomes_project 3 64497804 64544284 + MGP_BALBcJ_P0061072 Gfm1 protein_coding protein_coding MGP_BALBcJ_T0061073.1 MGP_BALBcJ_G0027253.1 mouse_genomes_project 3 64497824 64526590 + Gfm1 protein_coding processed_transcript MGP_BALBcJ_T0061074.1 MGP_BALBcJ_G0027253.1 mouse_genomes_project 3 64497947 64525932 + MGP_BALBcJ_P0061074 Gfm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0061075.1 MGP_BALBcJ_G0027253.1 mouse_genomes_project 3 64524267 64542560 + Gfm1 protein_coding retained_intron MGP_BALBcJ_T0099777.1 MGP_BALBcJ_G0037813.1 mouse_genomes_project 3 101153282 101153386 - Gm25199 snRNA snRNA MGP_BALBcJ_T0001192.1 MGP_BALBcJ_G0001116.1 mouse_genomes_project 3 48748437 48751285 - TEC TEC MGP_BALBcJ_T0014322.1 MGP_BALBcJ_G0012419.1 mouse_genomes_project 3 136432656 136433431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062105.1 MGP_BALBcJ_G0027487.1 mouse_genomes_project 3 90050413 90052079 - MGP_BALBcJ_P0062105 Lce1f protein_coding protein_coding MGP_BALBcJ_T0001243.1 MGP_BALBcJ_G0001166.1 mouse_genomes_project 3 74865105 74868102 - TEC TEC MGP_BALBcJ_T0060281.1 MGP_BALBcJ_G0027098.1 mouse_genomes_project 3 27571285 27592704 + MGP_BALBcJ_P0060281 Samd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060282.1 MGP_BALBcJ_G0027098.1 mouse_genomes_project 3 27571332 27592712 + MGP_BALBcJ_P0060282 Samd7 protein_coding protein_coding MGP_BALBcJ_T0060283.1 MGP_BALBcJ_G0027098.1 mouse_genomes_project 3 27576037 27591033 + MGP_BALBcJ_P0060283 Samd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060284.1 MGP_BALBcJ_G0027098.1 mouse_genomes_project 3 27581369 27582610 + Samd7 protein_coding retained_intron MGP_BALBcJ_T0098896.1 MGP_BALBcJ_G0036943.1 mouse_genomes_project 3 99091879 99092955 + Gm42938 sense_intronic sense_intronic MGP_BALBcJ_T0001308.1 MGP_BALBcJ_G0001231.1 mouse_genomes_project 3 121107885 121110482 - TEC TEC MGP_BALBcJ_T0062083.1 MGP_BALBcJ_G0027468.1 mouse_genomes_project 3 89719633 89721300 + MGP_BALBcJ_P0062083 Sprr2h protein_coding protein_coding MGP_BALBcJ_T0062084.1 MGP_BALBcJ_G0027468.1 mouse_genomes_project 3 89719648 89721076 + MGP_BALBcJ_P0062084 Sprr2h protein_coding protein_coding MGP_BALBcJ_T0001230.1 MGP_BALBcJ_G0001153.1 mouse_genomes_project 3 63035990 63037995 + TEC TEC MGP_BALBcJ_T0007414.1 MGP_BALBcJ_G0006079.1 mouse_genomes_project 3 1636909 1638173 + 1110015O18Rik lincRNA lincRNA MGP_BALBcJ_T0007415.1 MGP_BALBcJ_G0006079.1 mouse_genomes_project 3 1638059 1654080 + 1110015O18Rik lincRNA lincRNA MGP_BALBcJ_T0007416.1 MGP_BALBcJ_G0006079.1 mouse_genomes_project 3 1638844 1653144 + 1110015O18Rik lincRNA lincRNA MGP_BALBcJ_T0014071.1 MGP_BALBcJ_G0012168.1 mouse_genomes_project 3 63620970 63621711 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007740.1 MGP_BALBcJ_G0006329.1 mouse_genomes_project 3 147272259 147314936 + Gm42649 lincRNA lincRNA MGP_BALBcJ_T0004268.1 MGP_BALBcJ_G0003749.1 mouse_genomes_project 3 87536198 87537694 - 4930537H20Rik antisense antisense MGP_BALBcJ_T0014323.1 MGP_BALBcJ_G0012420.1 mouse_genomes_project 3 136453983 136455196 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061340.1 MGP_BALBcJ_G0027319.1 mouse_genomes_project 3 81857259 81897054 + MGP_BALBcJ_P0061340 Tmem154 protein_coding protein_coding MGP_BALBcJ_T0061341.1 MGP_BALBcJ_G0027319.1 mouse_genomes_project 3 81857277 81877125 + Tmem154 protein_coding retained_intron MGP_BALBcJ_T0061342.1 MGP_BALBcJ_G0027319.1 mouse_genomes_project 3 81857437 81877015 + Tmem154 protein_coding processed_transcript MGP_BALBcJ_T0061343.1 MGP_BALBcJ_G0027319.1 mouse_genomes_project 3 81881682 81884006 + Tmem154 protein_coding retained_intron MGP_BALBcJ_T0013935.1 MGP_BALBcJ_G0012032.1 mouse_genomes_project 3 18478835 18479607 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014336.1 MGP_BALBcJ_G0012433.1 mouse_genomes_project 3 140380971 140381606 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014265.1 MGP_BALBcJ_G0012362.1 mouse_genomes_project 3 119165569 119166341 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014274.1 MGP_BALBcJ_G0012371.1 mouse_genomes_project 3 120959299 120959723 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061005.1 MGP_BALBcJ_G0027237.1 mouse_genomes_project 3 60873427 60901945 - MGP_BALBcJ_P0061005 Slc33a1 protein_coding protein_coding MGP_BALBcJ_T0061006.1 MGP_BALBcJ_G0027237.1 mouse_genomes_project 3 60879559 60902047 - MGP_BALBcJ_P0061006 Slc33a1 protein_coding protein_coding MGP_BALBcJ_T0061007.1 MGP_BALBcJ_G0027237.1 mouse_genomes_project 3 60879643 60901651 - MGP_BALBcJ_P0061007 Slc33a1 protein_coding protein_coding MGP_BALBcJ_T0101042.1 MGP_BALBcJ_G0039078.1 mouse_genomes_project 3 67320859 67320987 - Gm23477 snoRNA snoRNA MGP_BALBcJ_T0001161.1 MGP_BALBcJ_G0001086.1 mouse_genomes_project 3 38976078 38980154 + TEC TEC MGP_BALBcJ_T0014346.1 MGP_BALBcJ_G0012443.1 mouse_genomes_project 3 144518315 144518707 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062056.1 MGP_BALBcJ_G0027450.1 mouse_genomes_project 3 87866517 87868050 + MGP_BALBcJ_P0062056 S100a6 protein_coding protein_coding MGP_BALBcJ_T0062057.1 MGP_BALBcJ_G0027450.1 mouse_genomes_project 3 87866789 87867643 + S100a6 protein_coding retained_intron MGP_BALBcJ_T0062058.1 MGP_BALBcJ_G0027450.1 mouse_genomes_project 3 87866940 87868050 + MGP_BALBcJ_P0062058 S100a6 protein_coding protein_coding MGP_BALBcJ_T0062059.1 MGP_BALBcJ_G0027450.1 mouse_genomes_project 3 87867395 87877921 + MGP_BALBcJ_P0062059 S100a6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099787.1 MGP_BALBcJ_G0037823.1 mouse_genomes_project 3 120367874 120368030 + Gm25153 snRNA snRNA MGP_BALBcJ_T0017892.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 30907506 30910201 + processed_transcript retained_intron MGP_BALBcJ_T0017893.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 30907674 31447840 + processed_transcript sense_overlapping MGP_BALBcJ_T0017894.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 30907694 31485866 + processed_transcript sense_overlapping MGP_BALBcJ_T0017895.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31001949 31447915 + processed_transcript sense_overlapping MGP_BALBcJ_T0017896.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31002062 31317470 + processed_transcript sense_overlapping MGP_BALBcJ_T0017897.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31365628 31485690 + processed_transcript sense_overlapping MGP_BALBcJ_T0017898.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31365681 31487827 + processed_transcript sense_overlapping MGP_BALBcJ_T0017899.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31365688 31379179 + processed_transcript sense_overlapping MGP_BALBcJ_T0017900.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31365692 31447878 + processed_transcript sense_overlapping MGP_BALBcJ_T0017901.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31366016 31366083 + processed_transcript misc_RNA MGP_BALBcJ_T0017902.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31396200 31485830 + processed_transcript sense_overlapping MGP_BALBcJ_T0017903.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31446600 31487827 + processed_transcript sense_overlapping MGP_BALBcJ_T0017904.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31447605 31485733 + processed_transcript sense_overlapping MGP_BALBcJ_T0017905.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31447683 31490685 + processed_transcript sense_overlapping MGP_BALBcJ_T0017906.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31447728 31490648 + processed_transcript sense_overlapping MGP_BALBcJ_T0017907.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31447935 31492604 + processed_transcript sense_overlapping MGP_BALBcJ_T0017908.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31465445 31485982 + processed_transcript sense_overlapping MGP_BALBcJ_T0017909.1 MGP_BALBcJ_G0015439.1 mouse_genomes_project 3 31474648 31487829 + processed_transcript sense_overlapping MGP_BALBcJ_T0007548.1 MGP_BALBcJ_G0006177.1 mouse_genomes_project 3 70457775 70592487 - lincRNA lincRNA MGP_BALBcJ_T0014223.1 MGP_BALBcJ_G0012320.1 mouse_genomes_project 3 105725848 105726085 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001280.1 MGP_BALBcJ_G0001203.1 mouse_genomes_project 3 105631439 105633322 + TEC TEC MGP_BALBcJ_T0014116.1 MGP_BALBcJ_G0012213.1 mouse_genomes_project 3 75991170 75991837 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001293.1 MGP_BALBcJ_G0001216.1 mouse_genomes_project 3 116433076 116436587 + TEC TEC MGP_BALBcJ_T0007644.1 MGP_BALBcJ_G0006251.1 mouse_genomes_project 3 114534604 114535028 + 4930512P04Rik lincRNA lincRNA MGP_BALBcJ_T0062033.1 MGP_BALBcJ_G0027443.1 mouse_genomes_project 3 87775639 87777014 + MGP_BALBcJ_P0062033 S100a14 protein_coding protein_coding MGP_BALBcJ_T0062034.1 MGP_BALBcJ_G0027443.1 mouse_genomes_project 3 87775650 87777621 + MGP_BALBcJ_P0062034 S100a14 protein_coding protein_coding MGP_BALBcJ_T0062035.1 MGP_BALBcJ_G0027443.1 mouse_genomes_project 3 87775653 87777621 + MGP_BALBcJ_P0062035 S100a14 protein_coding protein_coding MGP_BALBcJ_T0062036.1 MGP_BALBcJ_G0027443.1 mouse_genomes_project 3 87775655 87777610 + S100a14 protein_coding retained_intron MGP_BALBcJ_T0007472.1 MGP_BALBcJ_G0006120.1 mouse_genomes_project 3 31289924 31290704 - Gm29135 lincRNA lincRNA MGP_BALBcJ_T0004232.1 MGP_BALBcJ_G0003723.1 mouse_genomes_project 3 56203685 56210804 + Gm38186 antisense antisense MGP_BALBcJ_T0062004.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87636996 87678801 - MGP_BALBcJ_P0062004 Ints3 protein_coding protein_coding MGP_BALBcJ_T0062005.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87637004 87679027 - MGP_BALBcJ_P0062005 Ints3 protein_coding protein_coding MGP_BALBcJ_T0062006.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87637684 87648806 - Ints3 protein_coding retained_intron MGP_BALBcJ_T0062007.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87637684 87679111 - MGP_BALBcJ_P0062007 Ints3 protein_coding protein_coding MGP_BALBcJ_T0062008.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87639975 87646367 - Ints3 protein_coding retained_intron MGP_BALBcJ_T0062009.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87646696 87648266 - Ints3 protein_coding retained_intron MGP_BALBcJ_T0062010.1 MGP_BALBcJ_G0027436.1 mouse_genomes_project 3 87653485 87679120 - Ints3 protein_coding retained_intron MGP_BALBcJ_T0101073.1 MGP_BALBcJ_G0039109.1 mouse_genomes_project 3 117547328 117547459 - Gm23432 snoRNA snoRNA MGP_BALBcJ_T0004219.1 MGP_BALBcJ_G0003713.1 mouse_genomes_project 3 48688427 48694784 + Gm37229 antisense antisense MGP_BALBcJ_T0060936.1 MGP_BALBcJ_G0027224.1 mouse_genomes_project 3 56905529 56923457 + MGP_BALBcJ_P0060936 Aadacl2 protein_coding protein_coding MGP_BALBcJ_T0060527.1 MGP_BALBcJ_G0027140.1 mouse_genomes_project 3 34205858 34210556 - MGP_BALBcJ_P0060527 Cetn4 protein_coding protein_coding MGP_BALBcJ_T0060528.1 MGP_BALBcJ_G0027140.1 mouse_genomes_project 3 34206869 34210530 - MGP_BALBcJ_P0060528 Cetn4 protein_coding protein_coding MGP_BALBcJ_T0060529.1 MGP_BALBcJ_G0027140.1 mouse_genomes_project 3 34207201 34210469 - MGP_BALBcJ_P0060529 Cetn4 protein_coding protein_coding MGP_BALBcJ_T0013883.1 MGP_BALBcJ_G0011980.1 mouse_genomes_project 3 5040393 5042245 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063304.1 MGP_BALBcJ_G0027775.1 mouse_genomes_project 3 113801759 113805646 - Slc30a7 protein_coding processed_transcript MGP_BALBcJ_T0063305.1 MGP_BALBcJ_G0027775.1 mouse_genomes_project 3 113801759 113869711 - MGP_BALBcJ_P0063305 Slc30a7 protein_coding protein_coding MGP_BALBcJ_T0063306.1 MGP_BALBcJ_G0027775.1 mouse_genomes_project 3 113846744 113854855 - Slc30a7 protein_coding processed_transcript MGP_BALBcJ_T0063307.1 MGP_BALBcJ_G0027775.1 mouse_genomes_project 3 113853856 113856121 - Slc30a7 protein_coding retained_intron MGP_BALBcJ_T0004289.1 MGP_BALBcJ_G0003763.1 mouse_genomes_project 3 94129964 94131991 - Gm15441 antisense antisense MGP_BALBcJ_T0004290.1 MGP_BALBcJ_G0003763.1 mouse_genomes_project 3 94129987 94140980 - Gm15441 antisense antisense MGP_BALBcJ_T0001250.1 MGP_BALBcJ_G0001173.1 mouse_genomes_project 3 83090127 83091668 + TEC TEC MGP_BALBcJ_T0063173.1 MGP_BALBcJ_G0027749.1 mouse_genomes_project 3 106186822 106207172 - MGP_BALBcJ_P0063173 Sars protein_coding protein_coding MGP_BALBcJ_T0063174.1 MGP_BALBcJ_G0027749.1 mouse_genomes_project 3 106188569 106207143 - MGP_BALBcJ_P0063174 Sars protein_coding protein_coding MGP_BALBcJ_T0063175.1 MGP_BALBcJ_G0027749.1 mouse_genomes_project 3 106190188 106207117 - MGP_BALBcJ_P0063175 Sars protein_coding protein_coding MGP_BALBcJ_T0063176.1 MGP_BALBcJ_G0027749.1 mouse_genomes_project 3 106191307 106207183 - MGP_BALBcJ_P0063176 Sars protein_coding protein_coding MGP_BALBcJ_T0063177.1 MGP_BALBcJ_G0027749.1 mouse_genomes_project 3 106196366 106207130 - Sars protein_coding retained_intron MGP_BALBcJ_T0062377.1 MGP_BALBcJ_G0027557.1 mouse_genomes_project 3 93055127 93085273 + MGP_BALBcJ_P0062377 Ctss protein_coding protein_coding MGP_BALBcJ_T0062378.1 MGP_BALBcJ_G0027557.1 mouse_genomes_project 3 93055235 93085279 + MGP_BALBcJ_P0062378 Ctss protein_coding protein_coding MGP_BALBcJ_T0014314.1 MGP_BALBcJ_G0012411.1 mouse_genomes_project 3 133927062 133929196 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063079.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105480820 105500256 - MGP_BALBcJ_P0063079 Csf1 protein_coding protein_coding MGP_BALBcJ_T0063080.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105480820 105500023 - MGP_BALBcJ_P0063080 Csf1 protein_coding protein_coding MGP_BALBcJ_T0063081.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105482787 105490752 - MGP_BALBcJ_P0063081 Csf1 protein_coding protein_coding MGP_BALBcJ_T0063082.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105485367 105500029 - MGP_BALBcJ_P0063082 Csf1 protein_coding protein_coding MGP_BALBcJ_T0063083.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105487505 105500029 - Csf1 protein_coding retained_intron MGP_BALBcJ_T0063084.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105488314 105490514 - MGP_BALBcJ_P0063084 Csf1 protein_coding protein_coding MGP_BALBcJ_T0063085.1 MGP_BALBcJ_G0027727.1 mouse_genomes_project 3 105490152 105500008 - MGP_BALBcJ_P0063085 Csf1 protein_coding protein_coding MGP_BALBcJ_T0014206.1 MGP_BALBcJ_G0012303.1 mouse_genomes_project 3 100569837 100570126 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061672.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86129374 86131284 - Dap3 protein_coding retained_intron MGP_BALBcJ_T0061673.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86129374 86155697 - MGP_BALBcJ_P0061673 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061674.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86129501 86136728 - MGP_BALBcJ_P0061674 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061675.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86129537 86136761 - MGP_BALBcJ_P0061675 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061676.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86129567 86155616 - MGP_BALBcJ_P0061676 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061677.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86134216 86156044 - MGP_BALBcJ_P0061677 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061678.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86134250 86156830 - MGP_BALBcJ_P0061678 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061679.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86135185 86156017 - MGP_BALBcJ_P0061679 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061680.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86135233 86155652 - MGP_BALBcJ_P0061680 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061681.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86139334 86144254 - MGP_BALBcJ_P0061681 Dap3 protein_coding protein_coding MGP_BALBcJ_T0061682.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86154798 86156759 - Dap3 protein_coding processed_transcript MGP_BALBcJ_T0061684.1 MGP_BALBcJ_G0027384.1 mouse_genomes_project 3 86156365 86156831 - Dap3 protein_coding processed_transcript MGP_BALBcJ_T0001275.1 MGP_BALBcJ_G0001198.1 mouse_genomes_project 3 102434180 102438506 + TEC TEC MGP_BALBcJ_T0098899.1 MGP_BALBcJ_G0036946.1 mouse_genomes_project 3 99820363 99821646 + Gm43244 sense_intronic sense_intronic MGP_BALBcJ_T0099739.1 MGP_BALBcJ_G0037775.1 mouse_genomes_project 3 55838166 55838338 - Gm25572 snRNA snRNA MGP_BALBcJ_T0061128.1 MGP_BALBcJ_G0027266.1 mouse_genomes_project 3 66137082 66199291 - MGP_BALBcJ_P0061128 Kpna4 protein_coding protein_coding MGP_BALBcJ_T0061129.1 MGP_BALBcJ_G0027266.1 mouse_genomes_project 3 66142154 66199270 - MGP_BALBcJ_P0061129 Kpna4 protein_coding protein_coding MGP_BALBcJ_T0061130.1 MGP_BALBcJ_G0027266.1 mouse_genomes_project 3 66167058 66198808 - MGP_BALBcJ_P0061130 Kpna4 protein_coding protein_coding MGP_BALBcJ_T0064373.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151949177 151972632 - MGP_BALBcJ_P0064373 Acadm protein_coding protein_coding MGP_BALBcJ_T0064374.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151952560 151957214 - Acadm protein_coding retained_intron MGP_BALBcJ_T0064375.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151952701 151965809 - Acadm protein_coding retained_intron MGP_BALBcJ_T0064376.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151957195 151964793 - Acadm protein_coding retained_intron MGP_BALBcJ_T0064377.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151964307 151966674 - Acadm protein_coding retained_intron MGP_BALBcJ_T0064378.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151964313 151972467 - MGP_BALBcJ_P0064378 Acadm protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064379.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151964367 151972446 - MGP_BALBcJ_P0064379 Acadm protein_coding protein_coding MGP_BALBcJ_T0064380.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151966294 151972442 - Acadm protein_coding retained_intron MGP_BALBcJ_T0064381.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151966656 151969903 - Acadm protein_coding retained_intron MGP_BALBcJ_T0064382.1 MGP_BALBcJ_G0027971.1 mouse_genomes_project 3 151969601 151972463 - Acadm protein_coding retained_intron MGP_BALBcJ_T0007565.1 MGP_BALBcJ_G0006191.1 mouse_genomes_project 3 80111236 80193645 - Gm30097 lincRNA lincRNA MGP_BALBcJ_T0007566.1 MGP_BALBcJ_G0006191.1 mouse_genomes_project 3 80111338 80180577 - Gm30097 lincRNA lincRNA MGP_BALBcJ_T0001262.1 MGP_BALBcJ_G0001185.1 mouse_genomes_project 3 93168938 93170667 + TEC TEC MGP_BALBcJ_T0013876.1 MGP_BALBcJ_G0011973.1 mouse_genomes_project 3 3013216 3016146 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063504.1 MGP_BALBcJ_G0027811.1 mouse_genomes_project 3 120637937 120775000 + MGP_BALBcJ_P0063504 Pde5a protein_coding protein_coding MGP_BALBcJ_T0063505.1 MGP_BALBcJ_G0027811.1 mouse_genomes_project 3 120638560 120774998 + MGP_BALBcJ_P0063505 Pde5a protein_coding protein_coding MGP_BALBcJ_T0063506.1 MGP_BALBcJ_G0027811.1 mouse_genomes_project 3 120639212 120685960 + Pde5a protein_coding retained_intron MGP_BALBcJ_T0014209.1 MGP_BALBcJ_G0012306.1 mouse_genomes_project 3 101412425 101412825 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007598.1 MGP_BALBcJ_G0006211.1 mouse_genomes_project 3 92905070 92917679 - lincRNA lincRNA MGP_BALBcJ_T0007699.1 MGP_BALBcJ_G0006296.1 mouse_genomes_project 3 136566171 136581704 - 4930425O10Rik lincRNA lincRNA MGP_BALBcJ_T0064095.1 MGP_BALBcJ_G0027924.1 mouse_genomes_project 3 142729754 142751475 - MGP_BALBcJ_P0064095 Clca3b protein_coding protein_coding MGP_BALBcJ_T0101906.1 MGP_BALBcJ_G0039791.1 mouse_genomes_project 3 56837084 56867632 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0062108.1 MGP_BALBcJ_G0027490.1 mouse_genomes_project 3 90097251 90099102 - MGP_BALBcJ_P0062108 Lce1h protein_coding protein_coding MGP_BALBcJ_T0061223.1 MGP_BALBcJ_G0027290.1 mouse_genomes_project 3 76951637 76981734 - MGP_BALBcJ_P0061223 Tmem144 protein_coding protein_coding MGP_BALBcJ_T0061224.1 MGP_BALBcJ_G0027290.1 mouse_genomes_project 3 76952206 76980291 - MGP_BALBcJ_P0061224 Tmem144 protein_coding protein_coding MGP_BALBcJ_T0061225.1 MGP_BALBcJ_G0027290.1 mouse_genomes_project 3 76971320 76992099 - MGP_BALBcJ_P0061225 Tmem144 protein_coding protein_coding MGP_BALBcJ_T0061226.1 MGP_BALBcJ_G0027290.1 mouse_genomes_project 3 76978392 76992094 - MGP_BALBcJ_P0061226 Tmem144 protein_coding protein_coding MGP_BALBcJ_T0061227.1 MGP_BALBcJ_G0027290.1 mouse_genomes_project 3 76978521 76981967 - Tmem144 protein_coding processed_transcript MGP_BALBcJ_T0014096.1 MGP_BALBcJ_G0012193.1 mouse_genomes_project 3 68970821 68970980 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102474.1 MGP_BALBcJ_G0040290.1 mouse_genomes_project 3 87195268 87198446 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001301.1 MGP_BALBcJ_G0001224.1 mouse_genomes_project 3 119642875 119646478 - TEC TEC MGP_BALBcJ_T0101069.1 MGP_BALBcJ_G0039105.1 mouse_genomes_project 3 112696571 112696703 - Gm23750 snoRNA snoRNA MGP_BALBcJ_T0007697.1 MGP_BALBcJ_G0006294.1 mouse_genomes_project 3 135773229 135773673 - Gm43689 lincRNA lincRNA MGP_BALBcJ_T0007453.1 MGP_BALBcJ_G0006102.1 mouse_genomes_project 3 18103786 18104505 - Gm29137 lincRNA lincRNA MGP_BALBcJ_T0013907.1 MGP_BALBcJ_G0012004.1 mouse_genomes_project 3 11167679 11167814 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102465.1 MGP_BALBcJ_G0040281.1 mouse_genomes_project 3 61646025 61661947 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001132.1 MGP_BALBcJ_G0001057.1 mouse_genomes_project 3 29876757 29879584 - TEC TEC MGP_BALBcJ_T0062101.1 MGP_BALBcJ_G0027483.1 mouse_genomes_project 3 90007811 90009519 - MGP_BALBcJ_P0062101 Lce1a2 protein_coding protein_coding MGP_BALBcJ_T0060989.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632041 60788293 - MGP_BALBcJ_P0060989 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060990.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632041 60788245 - MGP_BALBcJ_P0060990 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060991.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632044 60638165 - Plch1 protein_coding retained_intron MGP_BALBcJ_T0060992.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632044 60676640 - Plch1 protein_coding retained_intron MGP_BALBcJ_T0060993.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632044 60788245 - MGP_BALBcJ_P0060993 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060994.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632044 60788537 - MGP_BALBcJ_P0060994 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060995.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632044 60788511 - MGP_BALBcJ_P0060995 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060996.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632045 60788245 - MGP_BALBcJ_P0060996 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060997.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60632538 60836901 - MGP_BALBcJ_P0060997 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060998.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60634740 60637854 - MGP_BALBcJ_P0060998 Plch1 protein_coding protein_coding MGP_BALBcJ_T0060999.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60637626 60788613 - MGP_BALBcJ_P0060999 Plch1 protein_coding protein_coding MGP_BALBcJ_T0061000.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60718504 60836871 - MGP_BALBcJ_P0061000 Plch1 protein_coding protein_coding MGP_BALBcJ_T0061001.1 MGP_BALBcJ_G0027235.1 mouse_genomes_project 3 60806968 60836802 - MGP_BALBcJ_P0061001 Plch1 protein_coding protein_coding MGP_BALBcJ_T0098912.1 MGP_BALBcJ_G0036959.1 mouse_genomes_project 3 101855927 101860075 - Gm42702 sense_intronic sense_intronic MGP_BALBcJ_T0063124.1 MGP_BALBcJ_G0027737.1 mouse_genomes_project 3 105853873 105862507 + MGP_BALBcJ_P0063124 Gnat2 protein_coding protein_coding MGP_BALBcJ_T0063125.1 MGP_BALBcJ_G0027737.1 mouse_genomes_project 3 105853964 105857461 + MGP_BALBcJ_P0063125 Gnat2 protein_coding protein_coding MGP_BALBcJ_T0063126.1 MGP_BALBcJ_G0027737.1 mouse_genomes_project 3 105854222 105859492 + MGP_BALBcJ_P0063126 Gnat2 protein_coding protein_coding MGP_BALBcJ_T0063127.1 MGP_BALBcJ_G0027737.1 mouse_genomes_project 3 105854276 105862505 + Gnat2 protein_coding retained_intron MGP_BALBcJ_T0063128.1 MGP_BALBcJ_G0027737.1 mouse_genomes_project 3 105855532 105859507 + MGP_BALBcJ_P0063128 Gnat2 protein_coding protein_coding MGP_BALBcJ_T0063129.1 MGP_BALBcJ_G0027737.1 mouse_genomes_project 3 105858317 105862366 + Gnat2 protein_coding processed_transcript MGP_BALBcJ_T0060017.1 MGP_BALBcJ_G0027040.1 mouse_genomes_project 3 7158889 7162812 - MGP_BALBcJ_P0060017 Slc10a5 protein_coding protein_coding MGP_BALBcJ_T0014202.1 MGP_BALBcJ_G0012299.1 mouse_genomes_project 3 100090533 100091001 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004298.1 MGP_BALBcJ_G0003769.1 mouse_genomes_project 3 99106010 99107049 - Gm42538 antisense antisense MGP_BALBcJ_T0004299.1 MGP_BALBcJ_G0003769.1 mouse_genomes_project 3 99106669 99108340 - Gm42538 antisense antisense MGP_BALBcJ_T0013904.1 MGP_BALBcJ_G0012001.1 mouse_genomes_project 3 10577532 10578091 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099803.1 MGP_BALBcJ_G0037839.1 mouse_genomes_project 3 149956565 149956627 - Gm25056 snRNA snRNA MGP_BALBcJ_T0010525.1 MGP_BALBcJ_G0008650.1 mouse_genomes_project 3 106330453 106330527 - Gm22860 miRNA miRNA MGP_BALBcJ_T0062869.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101575134 101628755 + MGP_BALBcJ_P0062869 Ptpn22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062870.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101575269 101628768 + MGP_BALBcJ_P0062870 Ptpn22 protein_coding unknown_likely_coding MGP_BALBcJ_T0062871.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101575894 101592361 + Ptpn22 protein_coding processed_transcript MGP_BALBcJ_T0062872.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101593664 101595548 + Ptpn22 protein_coding retained_intron MGP_BALBcJ_T0062873.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101601838 101604295 + Ptpn22 protein_coding retained_intron MGP_BALBcJ_T0062874.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101601928 101619858 + Ptpn22 protein_coding processed_transcript MGP_BALBcJ_T0062875.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101604752 101625969 + Ptpn22 protein_coding retained_intron MGP_BALBcJ_T0062876.1 MGP_BALBcJ_G0027674.1 mouse_genomes_project 3 101618513 101628757 + Ptpn22 protein_coding retained_intron MGP_BALBcJ_T0001307.1 MGP_BALBcJ_G0001230.1 mouse_genomes_project 3 121081303 121081903 - TEC TEC MGP_BALBcJ_T0060452.1 MGP_BALBcJ_G0027126.1 mouse_genomes_project 3 32895435 32947765 - MGP_BALBcJ_P0060452 Ccdc144b protein_coding protein_coding MGP_BALBcJ_T0060453.1 MGP_BALBcJ_G0027126.1 mouse_genomes_project 3 32899600 32947750 - MGP_BALBcJ_P0060453 Ccdc144b protein_coding protein_coding MGP_BALBcJ_T0060454.1 MGP_BALBcJ_G0027126.1 mouse_genomes_project 3 32904485 32947750 - MGP_BALBcJ_P0060454 Ccdc144b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060197.1 MGP_BALBcJ_G0027084.1 mouse_genomes_project 3 24226809 24531371 - MGP_BALBcJ_P0060197 Fndc3b protein_coding protein_coding MGP_BALBcJ_T0060198.1 MGP_BALBcJ_G0027084.1 mouse_genomes_project 3 24226809 24531412 - MGP_BALBcJ_P0060198 Fndc3b protein_coding protein_coding MGP_BALBcJ_T0060199.1 MGP_BALBcJ_G0027084.1 mouse_genomes_project 3 24308831 24532280 - Fndc3b protein_coding retained_intron MGP_BALBcJ_T0060200.1 MGP_BALBcJ_G0027084.1 mouse_genomes_project 3 24315834 24532212 - MGP_BALBcJ_P0060200 Fndc3b protein_coding protein_coding MGP_BALBcJ_T0099766.1 MGP_BALBcJ_G0037802.1 mouse_genomes_project 3 90295638 90295741 - Gm22577 snRNA snRNA MGP_BALBcJ_T0062324.1 MGP_BALBcJ_G0027548.1 mouse_genomes_project 3 92756946 92761591 - MGP_BALBcJ_P0062324 Gm128 protein_coding protein_coding MGP_BALBcJ_T0062325.1 MGP_BALBcJ_G0027548.1 mouse_genomes_project 3 92757133 92761591 - MGP_BALBcJ_P0062325 Gm128 protein_coding protein_coding MGP_BALBcJ_T0007576.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85447686 85452169 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007577.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85447699 85466287 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007578.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85448185 85466844 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007579.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85450345 85465137 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007580.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85455358 85462709 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007581.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85455368 85466895 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007582.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85463512 85465151 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007583.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85465128 85470804 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007584.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85466781 85468859 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007585.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85469412 85470615 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0007586.1 MGP_BALBcJ_G0006201.1 mouse_genomes_project 3 85469627 85470804 + Gm3764 lincRNA lincRNA MGP_BALBcJ_T0001204.1 MGP_BALBcJ_G0001127.1 mouse_genomes_project 3 50007151 50011327 + TEC TEC MGP_BALBcJ_T0014205.1 MGP_BALBcJ_G0012302.1 mouse_genomes_project 3 100522309 100522717 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014301.1 MGP_BALBcJ_G0012398.1 mouse_genomes_project 3 132130017 132130483 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060769.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600241 51635950 + MGP_BALBcJ_P0060769 Supt20 protein_coding protein_coding MGP_BALBcJ_T0060770.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600257 51636076 + MGP_BALBcJ_P0060770 Supt20 protein_coding protein_coding MGP_BALBcJ_T0060771.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600257 51636076 + MGP_BALBcJ_P0060771 Supt20 protein_coding protein_coding MGP_BALBcJ_T0060772.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600259 51636080 + MGP_BALBcJ_P0060772 Supt20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060773.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600269 51614338 + MGP_BALBcJ_P0060773 Supt20 protein_coding protein_coding MGP_BALBcJ_T0060774.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600292 51620206 + Supt20 protein_coding retained_intron MGP_BALBcJ_T0060775.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600292 51602789 + Supt20 protein_coding retained_intron MGP_BALBcJ_T0060776.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600292 51603753 + Supt20 protein_coding retained_intron MGP_BALBcJ_T0060777.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600296 51614569 + MGP_BALBcJ_P0060777 Supt20 protein_coding protein_coding MGP_BALBcJ_T0060778.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600539 51624289 + MGP_BALBcJ_P0060778 Supt20 protein_coding protein_coding MGP_BALBcJ_T0060779.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51600547 51636077 + MGP_BALBcJ_P0060779 Supt20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060780.1 MGP_BALBcJ_G0027185.1 mouse_genomes_project 3 51619691 51621804 + Supt20 protein_coding retained_intron MGP_BALBcJ_T0060065.1 MGP_BALBcJ_G0027056.1 mouse_genomes_project 3 12675683 12732030 - MGP_BALBcJ_P0060065 protein_coding protein_coding MGP_BALBcJ_T0060066.1 MGP_BALBcJ_G0027056.1 mouse_genomes_project 3 12675683 12732110 - MGP_BALBcJ_P0060066 protein_coding protein_coding MGP_BALBcJ_T0060068.1 MGP_BALBcJ_G0027056.1 mouse_genomes_project 3 12711321 12732069 - protein_coding retained_intron MGP_BALBcJ_T0060072.1 MGP_BALBcJ_G0027056.1 mouse_genomes_project 3 12713371 12732036 - MGP_BALBcJ_P0060072 protein_coding protein_coding MGP_BALBcJ_T0060840.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52530747 53088629 - MGP_BALBcJ_P0060840 Nbea protein_coding protein_coding MGP_BALBcJ_T0060841.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52530751 52596593 - Nbea protein_coding processed_transcript MGP_BALBcJ_T0060842.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52532072 52693060 - Nbea protein_coding processed_transcript MGP_BALBcJ_T0060843.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52602012 52630402 - Nbea protein_coding retained_intron MGP_BALBcJ_T0060844.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52684883 52694103 - Nbea protein_coding retained_intron MGP_BALBcJ_T0060845.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52685788 52689648 - Nbea protein_coding retained_intron MGP_BALBcJ_T0060847.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52870671 52877997 - Nbea protein_coding retained_intron MGP_BALBcJ_T0060848.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52911956 52914381 - Nbea protein_coding retained_intron MGP_BALBcJ_T0060849.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52927899 52934161 - Nbea protein_coding retained_intron MGP_BALBcJ_T0060850.1 MGP_BALBcJ_G0027198.1 mouse_genomes_project 3 52941050 52949441 - Nbea protein_coding retained_intron MGP_BALBcJ_T0014297.1 MGP_BALBcJ_G0012394.1 mouse_genomes_project 3 130671207 130673392 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001357.1 MGP_BALBcJ_G0001279.1 mouse_genomes_project 3 133308496 133316205 - TEC TEC MGP_BALBcJ_T0001326.1 MGP_BALBcJ_G0001249.1 mouse_genomes_project 3 124941984 124945423 - TEC TEC MGP_BALBcJ_T0102455.1 MGP_BALBcJ_G0040271.1 mouse_genomes_project 3 19901585 19904088 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001367.1 MGP_BALBcJ_G0001289.1 mouse_genomes_project 3 144285521 144286861 + TEC TEC MGP_BALBcJ_T0001347.1 MGP_BALBcJ_G0001269.1 mouse_genomes_project 3 128822744 128824123 + TEC TEC MGP_BALBcJ_T0014066.1 MGP_BALBcJ_G0012163.1 mouse_genomes_project 3 63053050 63055932 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063245.1 MGP_BALBcJ_G0027763.1 mouse_genomes_project 3 106746750 106803486 - MGP_BALBcJ_P0063245 Fam102b protein_coding protein_coding MGP_BALBcJ_T0001374.1 MGP_BALBcJ_G0001296.1 mouse_genomes_project 3 150195116 150196231 + TEC TEC MGP_BALBcJ_T0064041.1 MGP_BALBcJ_G0027913.1 mouse_genomes_project 3 140427981 140459404 + MGP_BALBcJ_P0064041 Gbp2b protein_coding protein_coding MGP_BALBcJ_T0060557.1 MGP_BALBcJ_G0027145.1 mouse_genomes_project 3 34541353 34546005 + MGP_BALBcJ_P0060557 Spry1 protein_coding protein_coding MGP_BALBcJ_T0060558.1 MGP_BALBcJ_G0027145.1 mouse_genomes_project 3 34541364 34546005 + MGP_BALBcJ_P0060558 Spry1 protein_coding protein_coding MGP_BALBcJ_T0060559.1 MGP_BALBcJ_G0027145.1 mouse_genomes_project 3 34541486 34546005 + MGP_BALBcJ_P0060559 Spry1 protein_coding protein_coding MGP_BALBcJ_T0014087.1 MGP_BALBcJ_G0012184.1 mouse_genomes_project 3 67043546 67044424 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062130.1 MGP_BALBcJ_G0027506.1 mouse_genomes_project 3 90608093 90612612 + Flg protein_coding TEC MGP_BALBcJ_T0062131.1 MGP_BALBcJ_G0027506.1 mouse_genomes_project 3 90608111 90614883 + MGP_BALBcJ_P0062131 Flg protein_coding protein_coding MGP_BALBcJ_T0062132.1 MGP_BALBcJ_G0027506.1 mouse_genomes_project 3 90612134 90614883 + MGP_BALBcJ_P0062132 Flg protein_coding protein_coding MGP_BALBcJ_T0014333.1 MGP_BALBcJ_G0012430.1 mouse_genomes_project 3 138675271 138675812 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001383.1 MGP_BALBcJ_G0001305.1 mouse_genomes_project 3 152175229 152177462 + TEC TEC MGP_BALBcJ_T0001327.1 MGP_BALBcJ_G0001250.1 mouse_genomes_project 3 125034784 125037626 - TEC TEC MGP_BALBcJ_T0061275.1 MGP_BALBcJ_G0027301.1 mouse_genomes_project 3 79721662 79731315 - MGP_BALBcJ_P0061275 Npy2r protein_coding protein_coding MGP_BALBcJ_T0061276.1 MGP_BALBcJ_G0027301.1 mouse_genomes_project 3 79721665 79731283 - MGP_BALBcJ_P0061276 Npy2r protein_coding protein_coding MGP_BALBcJ_T0061277.1 MGP_BALBcJ_G0027301.1 mouse_genomes_project 3 79723228 79731191 - MGP_BALBcJ_P0061277 Npy2r protein_coding protein_coding MGP_BALBcJ_T0061278.1 MGP_BALBcJ_G0027301.1 mouse_genomes_project 3 79723228 79731191 - MGP_BALBcJ_P0061278 Npy2r protein_coding protein_coding MGP_BALBcJ_T0062135.1 MGP_BALBcJ_G0027509.1 mouse_genomes_project 3 90800588 90803815 + MGP_BALBcJ_P0062135 Tchhl1 protein_coding protein_coding MGP_BALBcJ_T0004341.1 MGP_BALBcJ_G0003792.1 mouse_genomes_project 3 120278322 120293863 - Gm42835 antisense antisense MGP_BALBcJ_T0098910.1 MGP_BALBcJ_G0036957.1 mouse_genomes_project 3 101799737 101800803 - 9530097N15Rik sense_intronic sense_intronic MGP_BALBcJ_T0007473.1 MGP_BALBcJ_G0006121.1 mouse_genomes_project 3 31370581 31377519 - Gm42695 lincRNA lincRNA MGP_BALBcJ_T0098875.1 MGP_BALBcJ_G0036923.1 mouse_genomes_project 3 16568967 16569580 + BC002189 sense_intronic sense_intronic MGP_BALBcJ_T0007544.1 MGP_BALBcJ_G0006174.1 mouse_genomes_project 3 67861068 67896157 - Gm6634 lincRNA lincRNA MGP_BALBcJ_T0062345.1 MGP_BALBcJ_G0027552.1 mouse_genomes_project 3 92816186 92826869 - MGP_BALBcJ_P0062345 Anxa9 protein_coding protein_coding MGP_BALBcJ_T0062346.1 MGP_BALBcJ_G0027552.1 mouse_genomes_project 3 92816186 92827241 - MGP_BALBcJ_P0062346 Anxa9 protein_coding protein_coding MGP_BALBcJ_T0062347.1 MGP_BALBcJ_G0027552.1 mouse_genomes_project 3 92816388 92826869 - MGP_BALBcJ_P0062347 Anxa9 protein_coding protein_coding MGP_BALBcJ_T0062348.1 MGP_BALBcJ_G0027552.1 mouse_genomes_project 3 92825997 92826869 - MGP_BALBcJ_P0062348 Anxa9 protein_coding protein_coding MGP_BALBcJ_T0063943.1 MGP_BALBcJ_G0027893.1 mouse_genomes_project 3 135950408 135989593 - MGP_BALBcJ_P0063943 Mttp protein_coding protein_coding MGP_BALBcJ_T0063944.1 MGP_BALBcJ_G0027893.1 mouse_genomes_project 3 135950423 136000551 - MGP_BALBcJ_P0063944 Mttp protein_coding unknown_likely_coding MGP_BALBcJ_T0063945.1 MGP_BALBcJ_G0027893.1 mouse_genomes_project 3 135951608 136000509 - MGP_BALBcJ_P0063945 Mttp protein_coding protein_coding MGP_BALBcJ_T0063946.1 MGP_BALBcJ_G0027893.1 mouse_genomes_project 3 135999383 136002086 - Mttp protein_coding retained_intron MGP_BALBcJ_T0063704.1 MGP_BALBcJ_G0027846.1 mouse_genomes_project 3 127746946 127763133 + MGP_BALBcJ_P0063704 Cfi protein_coding protein_coding MGP_BALBcJ_T0063705.1 MGP_BALBcJ_G0027846.1 mouse_genomes_project 3 127747803 127789315 + MGP_BALBcJ_P0063705 Cfi protein_coding protein_coding MGP_BALBcJ_T0004213.1 MGP_BALBcJ_G0003707.1 mouse_genomes_project 3 34130158 34131295 + Gm12534 antisense antisense MGP_BALBcJ_T0014195.1 MGP_BALBcJ_G0012292.1 mouse_genomes_project 3 98637282 98637781 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061688.1 MGP_BALBcJ_G0027386.1 mouse_genomes_project 3 86290577 86309754 - MGP_BALBcJ_P0061688 Gm43738 protein_coding protein_coding MGP_BALBcJ_T0010482.1 MGP_BALBcJ_G0008607.1 mouse_genomes_project 3 23835560 23835698 - Gm44464 miRNA miRNA MGP_BALBcJ_T0060340.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29363610 29414343 + MGP_BALBcJ_P0060340 Mfn1 protein_coding protein_coding MGP_BALBcJ_T0060341.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29363676 29381031 + Mfn1 protein_coding retained_intron MGP_BALBcJ_T0060342.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29363684 29380744 + MGP_BALBcJ_P0060342 Mfn1 protein_coding protein_coding MGP_BALBcJ_T0060343.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29365690 29378182 + MGP_BALBcJ_P0060343 Mfn1 protein_coding protein_coding MGP_BALBcJ_T0060344.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29365699 29412457 + MGP_BALBcJ_P0060344 Mfn1 protein_coding protein_coding MGP_BALBcJ_T0060345.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29380579 29397850 + Mfn1 protein_coding retained_intron MGP_BALBcJ_T0060346.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29388849 29398118 + Mfn1 protein_coding retained_intron MGP_BALBcJ_T0060347.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29396264 29405046 + MGP_BALBcJ_P0060347 Mfn1 protein_coding protein_coding MGP_BALBcJ_T0060348.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29397623 29398516 + Mfn1 protein_coding retained_intron MGP_BALBcJ_T0060349.1 MGP_BALBcJ_G0027111.1 mouse_genomes_project 3 29409321 29412261 + Mfn1 protein_coding retained_intron MGP_BALBcJ_T0014253.1 MGP_BALBcJ_G0012350.1 mouse_genomes_project 3 114399140 114399582 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013989.1 MGP_BALBcJ_G0012086.1 mouse_genomes_project 3 39167864 39168012 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062147.1 MGP_BALBcJ_G0027516.1 mouse_genomes_project 3 91747505 91749634 + MGP_BALBcJ_P0062147 C2cd4d protein_coding protein_coding MGP_BALBcJ_T0062148.1 MGP_BALBcJ_G0027516.1 mouse_genomes_project 3 91747570 91748232 + C2cd4d protein_coding retained_intron MGP_BALBcJ_T0062116.1 MGP_BALBcJ_G0027497.1 mouse_genomes_project 3 90263429 90264715 - MGP_BALBcJ_P0062116 Lce3a protein_coding protein_coding MGP_BALBcJ_T0013887.1 MGP_BALBcJ_G0011984.1 mouse_genomes_project 3 5696070 5696403 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0059970.1 MGP_BALBcJ_G0027023.1 mouse_genomes_project 3 4317114 4371602 + MGP_BALBcJ_P0059970 Zc2hc1a protein_coding protein_coding MGP_BALBcJ_T0059971.1 MGP_BALBcJ_G0027023.1 mouse_genomes_project 3 4317117 4369844 + MGP_BALBcJ_P0059971 Zc2hc1a protein_coding protein_coding MGP_BALBcJ_T0059972.1 MGP_BALBcJ_G0027023.1 mouse_genomes_project 3 4351478 4369269 + Zc2hc1a protein_coding retained_intron MGP_BALBcJ_T0060375.1 MGP_BALBcJ_G0027116.1 mouse_genomes_project 3 29658612 29778854 + MGP_BALBcJ_P0060375 Usp13 protein_coding protein_coding MGP_BALBcJ_T0060376.1 MGP_BALBcJ_G0027116.1 mouse_genomes_project 3 29658637 29774069 + MGP_BALBcJ_P0060376 Usp13 protein_coding protein_coding MGP_BALBcJ_T0060377.1 MGP_BALBcJ_G0027116.1 mouse_genomes_project 3 29658777 29755483 + MGP_BALBcJ_P0060377 Usp13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060378.1 MGP_BALBcJ_G0027116.1 mouse_genomes_project 3 29755452 29774077 + MGP_BALBcJ_P0060378 Usp13 protein_coding protein_coding MGP_BALBcJ_T0013932.1 MGP_BALBcJ_G0012029.1 mouse_genomes_project 3 17656314 17657926 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007422.1 MGP_BALBcJ_G0006084.1 mouse_genomes_project 3 5543588 5546919 - C230057A21Rik lincRNA lincRNA MGP_BALBcJ_T0007423.1 MGP_BALBcJ_G0006084.1 mouse_genomes_project 3 5543783 5547079 - C230057A21Rik lincRNA lincRNA MGP_BALBcJ_T0063038.1 MGP_BALBcJ_G0027713.1 mouse_genomes_project 3 104911095 104924480 + MGP_BALBcJ_P0063038 Kcna10 protein_coding protein_coding MGP_BALBcJ_T0063039.1 MGP_BALBcJ_G0027713.1 mouse_genomes_project 3 104911183 104915762 + Kcna10 protein_coding processed_transcript MGP_BALBcJ_T0099802.1 MGP_BALBcJ_G0037838.1 mouse_genomes_project 3 147310168 147310274 - Gm26468 snRNA snRNA MGP_BALBcJ_T0014240.1 MGP_BALBcJ_G0012337.1 mouse_genomes_project 3 110129859 110130721 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102487.1 MGP_BALBcJ_G0040303.1 mouse_genomes_project 3 96498477 96500415 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013918.1 MGP_BALBcJ_G0012015.1 mouse_genomes_project 3 14264440 14264945 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004392.1 MGP_BALBcJ_G0003830.1 mouse_genomes_project 3 151939904 151943668 + Gm43400 antisense antisense MGP_BALBcJ_T0013921.1 MGP_BALBcJ_G0012018.1 mouse_genomes_project 3 15424860 15425272 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063138.1 MGP_BALBcJ_G0027741.1 mouse_genomes_project 3 105957297 105962445 - MGP_BALBcJ_P0063138 Cyb561d1 protein_coding protein_coding MGP_BALBcJ_T0063139.1 MGP_BALBcJ_G0027741.1 mouse_genomes_project 3 105957381 105962823 - Cyb561d1 protein_coding processed_transcript MGP_BALBcJ_T0063140.1 MGP_BALBcJ_G0027741.1 mouse_genomes_project 3 105957381 105962445 - MGP_BALBcJ_P0063140 Cyb561d1 protein_coding protein_coding MGP_BALBcJ_T0063141.1 MGP_BALBcJ_G0027741.1 mouse_genomes_project 3 105959883 105962206 - MGP_BALBcJ_P0063141 Cyb561d1 protein_coding protein_coding MGP_BALBcJ_T0001236.1 MGP_BALBcJ_G0001159.1 mouse_genomes_project 3 70282807 70284932 + TEC TEC MGP_BALBcJ_T0001177.1 MGP_BALBcJ_G0001102.1 mouse_genomes_project 3 47842193 47843486 - TEC TEC MGP_BALBcJ_T0061335.1 MGP_BALBcJ_G0027316.1 mouse_genomes_project 3 81676433 81768909 - MGP_BALBcJ_P0061335 protein_coding protein_coding MGP_BALBcJ_T0061337.1 MGP_BALBcJ_G0027316.1 mouse_genomes_project 3 81677544 81768860 - MGP_BALBcJ_P0061337 protein_coding protein_coding MGP_BALBcJ_T0061338.1 MGP_BALBcJ_G0027316.1 mouse_genomes_project 3 81678076 81769000 - MGP_BALBcJ_P0061338 protein_coding protein_coding MGP_BALBcJ_T0007670.1 MGP_BALBcJ_G0006270.1 mouse_genomes_project 3 126968885 126971625 - Gm28543 lincRNA lincRNA MGP_BALBcJ_T0007708.1 MGP_BALBcJ_G0006303.1 mouse_genomes_project 3 140961833 141011648 + Gm43614 lincRNA lincRNA MGP_BALBcJ_T0098900.1 MGP_BALBcJ_G0036947.1 mouse_genomes_project 3 99825039 99827921 + 4632404M16Rik sense_intronic sense_intronic MGP_BALBcJ_T0007488.1 MGP_BALBcJ_G0006134.1 mouse_genomes_project 3 35100899 35105868 - 5430434I15Rik lincRNA lincRNA MGP_BALBcJ_T0001212.1 MGP_BALBcJ_G0001135.1 mouse_genomes_project 3 52484868 52487221 + TEC TEC MGP_BALBcJ_T0060909.1 MGP_BALBcJ_G0027215.1 mouse_genomes_project 3 55963795 55969175 - MGP_BALBcJ_P0060909 Gpr171 protein_coding protein_coding MGP_BALBcJ_T0062729.1 MGP_BALBcJ_G0027649.1 mouse_genomes_project 3 99503736 99527940 - MGP_BALBcJ_P0062729 Mab21l3 protein_coding protein_coding MGP_BALBcJ_T0062730.1 MGP_BALBcJ_G0027649.1 mouse_genomes_project 3 99504343 99540930 - MGP_BALBcJ_P0062730 Mab21l3 protein_coding protein_coding MGP_BALBcJ_T0101694.1 MGP_BALBcJ_G0039675.1 mouse_genomes_project 3 120697975 120698269 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0062314.1 MGP_BALBcJ_G0027546.1 mouse_genomes_project 3 92737264 92748473 - MGP_BALBcJ_P0062314 Mllt11 protein_coding protein_coding MGP_BALBcJ_T0062315.1 MGP_BALBcJ_G0027546.1 mouse_genomes_project 3 92738158 92752195 - MGP_BALBcJ_P0062315 Mllt11 protein_coding protein_coding MGP_BALBcJ_T0062316.1 MGP_BALBcJ_G0027546.1 mouse_genomes_project 3 92738168 92752198 - MGP_BALBcJ_P0062316 Mllt11 protein_coding protein_coding MGP_BALBcJ_T0062317.1 MGP_BALBcJ_G0027546.1 mouse_genomes_project 3 92747881 92750506 - Mllt11 protein_coding processed_transcript MGP_BALBcJ_T0062321.1 MGP_BALBcJ_G0027546.1 mouse_genomes_project 3 92748841 92750432 - Mllt11 protein_coding processed_transcript MGP_BALBcJ_T0061459.1 MGP_BALBcJ_G0027346.1 mouse_genomes_project 3 85156855 85160772 + MGP_BALBcJ_P0061459 Mrpl24 protein_coding protein_coding MGP_BALBcJ_T0061460.1 MGP_BALBcJ_G0027346.1 mouse_genomes_project 3 85156855 85160762 + MGP_BALBcJ_P0061460 Mrpl24 protein_coding protein_coding MGP_BALBcJ_T0061461.1 MGP_BALBcJ_G0027346.1 mouse_genomes_project 3 85156885 85159152 + MGP_BALBcJ_P0061461 Mrpl24 protein_coding protein_coding MGP_BALBcJ_T0061462.1 MGP_BALBcJ_G0027346.1 mouse_genomes_project 3 85156906 85157872 + Mrpl24 protein_coding retained_intron MGP_BALBcJ_T0061463.1 MGP_BALBcJ_G0027346.1 mouse_genomes_project 3 85156912 85160772 + MGP_BALBcJ_P0061463 Mrpl24 protein_coding protein_coding MGP_BALBcJ_T0061464.1 MGP_BALBcJ_G0027346.1 mouse_genomes_project 3 85158754 85160772 + MGP_BALBcJ_P0061464 Mrpl24 protein_coding protein_coding MGP_BALBcJ_T0014186.1 MGP_BALBcJ_G0012283.1 mouse_genomes_project 3 96512030 96512285 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060668.1 MGP_BALBcJ_G0027164.1 mouse_genomes_project 3 46819246 47380990 - MGP_BALBcJ_P0060668 Slc7a11 protein_coding protein_coding MGP_BALBcJ_T0060669.1 MGP_BALBcJ_G0027164.1 mouse_genomes_project 3 47301450 47380987 - MGP_BALBcJ_P0060669 Slc7a11 protein_coding protein_coding MGP_BALBcJ_T0060670.1 MGP_BALBcJ_G0027164.1 mouse_genomes_project 3 47306335 47307285 - Slc7a11 protein_coding processed_transcript MGP_BALBcJ_T0060671.1 MGP_BALBcJ_G0027164.1 mouse_genomes_project 3 47352472 47380990 - Slc7a11 protein_coding retained_intron MGP_BALBcJ_T0060672.1 MGP_BALBcJ_G0027164.1 mouse_genomes_project 3 47378011 47380981 - Slc7a11 protein_coding retained_intron MGP_BALBcJ_T0001241.1 MGP_BALBcJ_G0001164.1 mouse_genomes_project 3 73703344 73706905 + TEC TEC MGP_BALBcJ_T0064169.1 MGP_BALBcJ_G0027942.1 mouse_genomes_project 3 144404607 144407748 + Ctbs protein_coding retained_intron MGP_BALBcJ_T0064170.1 MGP_BALBcJ_G0027942.1 mouse_genomes_project 3 144405282 144421336 + MGP_BALBcJ_P0064170 Ctbs protein_coding protein_coding MGP_BALBcJ_T0064171.1 MGP_BALBcJ_G0027942.1 mouse_genomes_project 3 144405290 144412150 + MGP_BALBcJ_P0064171 Ctbs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064172.1 MGP_BALBcJ_G0027942.1 mouse_genomes_project 3 144405305 144421258 + MGP_BALBcJ_P0064172 Ctbs protein_coding protein_coding MGP_BALBcJ_T0013946.1 MGP_BALBcJ_G0012043.1 mouse_genomes_project 3 24119080 24119349 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060320.1 MGP_BALBcJ_G0027105.1 mouse_genomes_project 3 28031200 28147121 - MGP_BALBcJ_P0060320 Slc7a14 protein_coding protein_coding MGP_BALBcJ_T0060321.1 MGP_BALBcJ_G0027105.1 mouse_genomes_project 3 28051513 28094988 - MGP_BALBcJ_P0060321 Slc7a14 protein_coding protein_coding MGP_BALBcJ_T0001209.1 MGP_BALBcJ_G0001132.1 mouse_genomes_project 3 52239927 52242058 + TEC TEC MGP_BALBcJ_T0014047.1 MGP_BALBcJ_G0012144.1 mouse_genomes_project 3 56600807 56600949 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014187.1 MGP_BALBcJ_G0012284.1 mouse_genomes_project 3 96776103 96776687 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064034.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140392986 140395919 + MGP_BALBcJ_P0064034 Gbp3 protein_coding protein_coding MGP_BALBcJ_T0064035.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140393012 140407192 + MGP_BALBcJ_P0064035 Gbp3 protein_coding protein_coding MGP_BALBcJ_T0064036.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140393103 140398173 + MGP_BALBcJ_P0064036 Gbp3 protein_coding protein_coding MGP_BALBcJ_T0064037.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140393105 140407199 + MGP_BALBcJ_P0064037 Gbp3 protein_coding protein_coding MGP_BALBcJ_T0064038.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140393135 140399499 + Gbp3 protein_coding processed_transcript MGP_BALBcJ_T0064039.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140394390 140407197 + MGP_BALBcJ_P0064039 Gbp3 protein_coding protein_coding MGP_BALBcJ_T0064040.1 MGP_BALBcJ_G0027912.1 mouse_genomes_project 3 140395215 140399045 + MGP_BALBcJ_P0064040 Gbp3 protein_coding protein_coding MGP_BALBcJ_T0001352.1 MGP_BALBcJ_G0001274.1 mouse_genomes_project 3 130637401 130640616 + TEC TEC MGP_BALBcJ_T0061708.1 MGP_BALBcJ_G0027390.1 mouse_genomes_project 3 86354383 86368765 - MGP_BALBcJ_P0061708 Hcn3 protein_coding protein_coding MGP_BALBcJ_T0061709.1 MGP_BALBcJ_G0027390.1 mouse_genomes_project 3 86357037 86359538 - Hcn3 protein_coding retained_intron MGP_BALBcJ_T0061710.1 MGP_BALBcJ_G0027390.1 mouse_genomes_project 3 86357154 86359520 - Hcn3 protein_coding retained_intron MGP_BALBcJ_T0061711.1 MGP_BALBcJ_G0027390.1 mouse_genomes_project 3 86359786 86368549 - Hcn3 protein_coding processed_transcript MGP_BALBcJ_T0064423.1 MGP_BALBcJ_G0027980.1 mouse_genomes_project 3 154613687 155364052 + MGP_BALBcJ_P0064423 Negr1 protein_coding protein_coding MGP_BALBcJ_T0064424.1 MGP_BALBcJ_G0027980.1 mouse_genomes_project 3 154613852 155218252 + MGP_BALBcJ_P0064424 Negr1 protein_coding protein_coding MGP_BALBcJ_T0064425.1 MGP_BALBcJ_G0027980.1 mouse_genomes_project 3 154613862 155245824 + MGP_BALBcJ_P0064425 Negr1 protein_coding protein_coding MGP_BALBcJ_T0064426.1 MGP_BALBcJ_G0027980.1 mouse_genomes_project 3 154614039 154618398 + Negr1 protein_coding retained_intron MGP_BALBcJ_T0064427.1 MGP_BALBcJ_G0027980.1 mouse_genomes_project 3 154614043 155056511 + MGP_BALBcJ_P0064427 Negr1 protein_coding protein_coding MGP_BALBcJ_T0063988.1 MGP_BALBcJ_G0027903.1 mouse_genomes_project 3 136596906 136765841 + MGP_BALBcJ_P0063988 Tspan5 protein_coding protein_coding MGP_BALBcJ_T0063989.1 MGP_BALBcJ_G0027903.1 mouse_genomes_project 3 136597016 136762492 + MGP_BALBcJ_P0063989 Tspan5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063990.1 MGP_BALBcJ_G0027903.1 mouse_genomes_project 3 136597216 136754963 + MGP_BALBcJ_P0063990 Tspan5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063991.1 MGP_BALBcJ_G0027903.1 mouse_genomes_project 3 136597480 136752586 + MGP_BALBcJ_P0063991 Tspan5 protein_coding protein_coding MGP_BALBcJ_T0063992.1 MGP_BALBcJ_G0027903.1 mouse_genomes_project 3 136636113 136760560 + MGP_BALBcJ_P0063992 Tspan5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063993.1 MGP_BALBcJ_G0027903.1 mouse_genomes_project 3 136698499 136762499 + MGP_BALBcJ_P0063993 Tspan5 protein_coding protein_coding MGP_BALBcJ_T0004231.1 MGP_BALBcJ_G0003722.1 mouse_genomes_project 3 55864384 55868073 - Gm43570 antisense antisense MGP_BALBcJ_T0001281.1 MGP_BALBcJ_G0001204.1 mouse_genomes_project 3 106048627 106053857 + TEC TEC MGP_BALBcJ_T0004384.1 MGP_BALBcJ_G0003824.1 mouse_genomes_project 3 146954092 146968996 + Gm43573 antisense antisense MGP_BALBcJ_T0007419.1 MGP_BALBcJ_G0006082.1 mouse_genomes_project 3 4745022 4777181 - 1700010I02Rik lincRNA lincRNA MGP_BALBcJ_T0007420.1 MGP_BALBcJ_G0006082.1 mouse_genomes_project 3 4745022 4777188 - 1700010I02Rik lincRNA lincRNA MGP_BALBcJ_T0014321.1 MGP_BALBcJ_G0012418.1 mouse_genomes_project 3 136355249 136355618 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0060801.1 MGP_BALBcJ_G0027191.1 mouse_genomes_project 3 51807375 51825790 - MGP_BALBcJ_P0060801 Sertm1 protein_coding protein_coding MGP_BALBcJ_T0060802.1 MGP_BALBcJ_G0027191.1 mouse_genomes_project 3 51807378 51826646 - MGP_BALBcJ_P0060802 Sertm1 protein_coding protein_coding MGP_BALBcJ_T0062531.1 MGP_BALBcJ_G0027595.1 mouse_genomes_project 3 94175379 94201427 + MGP_BALBcJ_P0062531 Lix1l protein_coding protein_coding MGP_BALBcJ_T0062532.1 MGP_BALBcJ_G0027595.1 mouse_genomes_project 3 94193160 94197481 + Lix1l protein_coding retained_intron MGP_BALBcJ_T0001121.1 MGP_BALBcJ_G0001046.1 mouse_genomes_project 3 26982927 26984561 - TEC TEC MGP_BALBcJ_T0062624.1 MGP_BALBcJ_G0027616.1 mouse_genomes_project 3 95274180 95275844 - MGP_BALBcJ_P0062624 Gm17651 protein_coding protein_coding MGP_BALBcJ_T0063740.1 MGP_BALBcJ_G0027853.1 mouse_genomes_project 3 128615233 128632093 - MGP_BALBcJ_P0063740 Ostc protein_coding protein_coding MGP_BALBcJ_T0063741.1 MGP_BALBcJ_G0027853.1 mouse_genomes_project 3 128615240 128615944 - Ostc protein_coding retained_intron MGP_BALBcJ_T0063742.1 MGP_BALBcJ_G0027853.1 mouse_genomes_project 3 128630345 128632065 - Ostc protein_coding retained_intron MGP_BALBcJ_T0063337.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114451314 114485584 - MGP_BALBcJ_P0063337 Trmt13 protein_coding protein_coding MGP_BALBcJ_T0063338.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114451315 114465048 - MGP_BALBcJ_P0063338 Trmt13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063339.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114451316 114465072 - MGP_BALBcJ_P0063339 Trmt13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063340.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114451557 114453698 - Trmt13 protein_coding processed_transcript MGP_BALBcJ_T0063341.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114454345 114465099 - Trmt13 protein_coding retained_intron MGP_BALBcJ_T0063342.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114456032 114464897 - MGP_BALBcJ_P0063342 Trmt13 protein_coding protein_coding MGP_BALBcJ_T0063343.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114459781 114464880 - MGP_BALBcJ_P0063343 Trmt13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063344.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114462201 114465013 - Trmt13 protein_coding retained_intron MGP_BALBcJ_T0063345.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114464170 114465050 - MGP_BALBcJ_P0063345 Trmt13 protein_coding protein_coding MGP_BALBcJ_T0063350.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114465606 114485118 - Trmt13 protein_coding processed_transcript MGP_BALBcJ_T0063352.1 MGP_BALBcJ_G0027783.1 mouse_genomes_project 3 114484536 114485405 - Trmt13 protein_coding retained_intron MGP_BALBcJ_T0014170.1 MGP_BALBcJ_G0012267.1 mouse_genomes_project 3 92872154 92872348 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0061960.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87453802 87454545 - MGP_BALBcJ_P0061960 Rps27rt protein_coding protein_coding MGP_BALBcJ_T0061961.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87453907 87454859 - MGP_BALBcJ_P0061961 Rps27rt protein_coding protein_coding MGP_BALBcJ_T0061962.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87453911 87454877 - Rps27rt protein_coding retained_intron MGP_BALBcJ_T0061963.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87453911 87454878 - Rps27rt protein_coding retained_intron MGP_BALBcJ_T0061964.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87453915 87454867 - Rps27rt protein_coding retained_intron MGP_BALBcJ_T0061965.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87453915 87454892 - MGP_BALBcJ_P0061965 Rps27rt protein_coding protein_coding MGP_BALBcJ_T0061966.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87454071 87454890 - Rps27rt protein_coding retained_intron MGP_BALBcJ_T0061967.1 MGP_BALBcJ_G0027428.1 mouse_genomes_project 3 87454302 87454889 - Rps27rt protein_coding retained_intron MGP_BALBcJ_T0099781.1 MGP_BALBcJ_G0037817.1 mouse_genomes_project 3 104077320 104077483 - Gm25704 snRNA snRNA MGP_BALBcJ_T0013878.1 MGP_BALBcJ_G0011975.1 mouse_genomes_project 3 3314855 3315837 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001345.1 MGP_BALBcJ_G0001267.1 mouse_genomes_project 3 128626227 128628598 - TEC TEC MGP_BALBcJ_T0014127.1 MGP_BALBcJ_G0012224.1 mouse_genomes_project 3 81735562 81736465 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099794.1 MGP_BALBcJ_G0037830.1 mouse_genomes_project 3 134961548 134961655 + Gm26107 snRNA snRNA MGP_BALBcJ_T0004233.1 MGP_BALBcJ_G0003724.1 mouse_genomes_project 3 57943475 57945623 - Gm37035 antisense antisense MGP_BALBcJ_T0063871.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133365536 133459834 + MGP_BALBcJ_P0063871 Manba protein_coding protein_coding MGP_BALBcJ_T0063872.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133365536 133443973 + MGP_BALBcJ_P0063872 Manba protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063873.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133365544 133443934 + Manba protein_coding retained_intron MGP_BALBcJ_T0063874.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133365550 133393527 + Manba protein_coding retained_intron MGP_BALBcJ_T0063875.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133397851 133431246 + Manba protein_coding processed_transcript MGP_BALBcJ_T0063876.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133403702 133405327 + Manba protein_coding processed_transcript MGP_BALBcJ_T0063877.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133433574 133439835 + Manba protein_coding retained_intron MGP_BALBcJ_T0063878.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133437363 133443176 + Manba protein_coding processed_transcript MGP_BALBcJ_T0063879.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133439239 133445191 + Manba protein_coding processed_transcript MGP_BALBcJ_T0063880.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133439310 133451660 + Manba protein_coding processed_transcript MGP_BALBcJ_T0063881.1 MGP_BALBcJ_G0027879.1 mouse_genomes_project 3 133451620 133455983 + Manba protein_coding processed_transcript MGP_BALBcJ_T0061844.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86633936 86643597 + MGP_BALBcJ_P0061844 Shc1 protein_coding protein_coding MGP_BALBcJ_T0061845.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86633956 86641295 + MGP_BALBcJ_P0061845 Shc1 protein_coding protein_coding MGP_BALBcJ_T0061846.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86633979 86643753 + MGP_BALBcJ_P0061846 Shc1 protein_coding protein_coding MGP_BALBcJ_T0061847.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86637672 86641094 + Shc1 protein_coding retained_intron MGP_BALBcJ_T0061848.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86638667 86646150 + MGP_BALBcJ_P0061848 Shc1 protein_coding protein_coding MGP_BALBcJ_T0061849.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86638681 86643753 + MGP_BALBcJ_P0061849 Shc1 protein_coding protein_coding MGP_BALBcJ_T0061850.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86639220 86645496 + MGP_BALBcJ_P0061850 Shc1 protein_coding protein_coding MGP_BALBcJ_T0061851.1 MGP_BALBcJ_G0027412.1 mouse_genomes_project 3 86641576 86644409 + Shc1 protein_coding processed_transcript MGP_BALBcJ_T0062027.1 MGP_BALBcJ_G0027440.1 mouse_genomes_project 3 87747854 87757397 - MGP_BALBcJ_P0062027 Chtop protein_coding protein_coding MGP_BALBcJ_T0062028.1 MGP_BALBcJ_G0027440.1 mouse_genomes_project 3 87750049 87757388 - MGP_BALBcJ_P0062028 Chtop protein_coding protein_coding MGP_BALBcJ_T0062029.1 MGP_BALBcJ_G0027440.1 mouse_genomes_project 3 87751022 87756934 - MGP_BALBcJ_P0062029 Chtop protein_coding protein_coding MGP_BALBcJ_T0014305.1 MGP_BALBcJ_G0012402.1 mouse_genomes_project 3 132854554 132855071 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064196.1 MGP_BALBcJ_G0027948.1 mouse_genomes_project 3 144600431 144606575 - MGP_BALBcJ_P0064196 4930503B20Rik protein_coding protein_coding MGP_BALBcJ_T0064201.1 MGP_BALBcJ_G0027948.1 mouse_genomes_project 3 144601516 144603564 - 4930503B20Rik protein_coding processed_transcript MGP_BALBcJ_T0064202.1 MGP_BALBcJ_G0027948.1 mouse_genomes_project 3 144604823 144606573 - MGP_BALBcJ_P0064202 4930503B20Rik protein_coding protein_coding MGP_BALBcJ_T0062072.1 MGP_BALBcJ_G0027459.1 mouse_genomes_project 3 89436189 89437903 - MGP_BALBcJ_P0062072 Prr9 protein_coding protein_coding MGP_BALBcJ_T0063479.1 MGP_BALBcJ_G0027807.1 mouse_genomes_project 3 120140383 120151689 + Gclm protein_coding processed_transcript MGP_BALBcJ_T0063480.1 MGP_BALBcJ_G0027807.1 mouse_genomes_project 3 120140657 120161224 + MGP_BALBcJ_P0063480 Gclm protein_coding protein_coding MGP_BALBcJ_T0063481.1 MGP_BALBcJ_G0027807.1 mouse_genomes_project 3 120140659 120157216 + MGP_BALBcJ_P0063481 Gclm protein_coding protein_coding MGP_BALBcJ_T0063482.1 MGP_BALBcJ_G0027807.1 mouse_genomes_project 3 120140752 120160052 + MGP_BALBcJ_P0063482 Gclm protein_coding protein_coding MGP_BALBcJ_T0063483.1 MGP_BALBcJ_G0027807.1 mouse_genomes_project 3 120156425 120161082 + Gclm protein_coding retained_intron MGP_BALBcJ_T0014097.1 MGP_BALBcJ_G0012194.1 mouse_genomes_project 3 69137950 69138455 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007457.1 MGP_BALBcJ_G0006106.1 mouse_genomes_project 3 19909791 19912766 + Gm37021 lincRNA lincRNA MGP_BALBcJ_T0061099.1 MGP_BALBcJ_G0027261.1 mouse_genomes_project 3 65935319 65937669 - MGP_BALBcJ_P0061099 Gm17641 protein_coding protein_coding MGP_BALBcJ_T0001319.1 MGP_BALBcJ_G0001242.1 mouse_genomes_project 3 124549959 124550611 + TEC TEC MGP_BALBcJ_T0099762.1 MGP_BALBcJ_G0037798.1 mouse_genomes_project 3 87197822 87197987 - Gm24046 snRNA snRNA MGP_BALBcJ_T0061559.1 MGP_BALBcJ_G0027366.1 mouse_genomes_project 3 85628307 85631377 - protein_coding retained_intron MGP_BALBcJ_T0061561.1 MGP_BALBcJ_G0027366.1 mouse_genomes_project 3 85628309 85631284 - MGP_BALBcJ_P0061561 protein_coding protein_coding MGP_BALBcJ_T0060894.1 MGP_BALBcJ_G0027210.1 mouse_genomes_project 3 55445490 55461881 + MGP_BALBcJ_P0060894 protein_coding protein_coding MGP_BALBcJ_T0060895.1 MGP_BALBcJ_G0027210.1 mouse_genomes_project 3 55445552 55457344 + protein_coding retained_intron MGP_BALBcJ_T0014254.1 MGP_BALBcJ_G0012351.1 mouse_genomes_project 3 114719091 114719476 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099790.1 MGP_BALBcJ_G0037826.1 mouse_genomes_project 3 129759983 129760077 + Gm26103 snRNA snRNA MGP_BALBcJ_T0007597.1 MGP_BALBcJ_G0006210.1 mouse_genomes_project 3 92218776 92219929 + lincRNA lincRNA MGP_BALBcJ_T0061724.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386310 86391603 + MGP_BALBcJ_P0061724 Scamp3 protein_coding protein_coding MGP_BALBcJ_T0061725.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386327 86391603 + MGP_BALBcJ_P0061725 Scamp3 protein_coding protein_coding MGP_BALBcJ_T0061726.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386333 86388503 + Scamp3 protein_coding retained_intron MGP_BALBcJ_T0061727.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386357 86391601 + MGP_BALBcJ_P0061727 Scamp3 protein_coding protein_coding MGP_BALBcJ_T0061728.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386368 86388290 + Scamp3 protein_coding retained_intron MGP_BALBcJ_T0061729.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386374 86388502 + Scamp3 protein_coding retained_intron MGP_BALBcJ_T0061730.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386458 86390114 + Scamp3 protein_coding retained_intron MGP_BALBcJ_T0061731.1 MGP_BALBcJ_G0027392.1 mouse_genomes_project 3 86386595 86389223 + Scamp3 protein_coding retained_intron MGP_BALBcJ_T0001391.1 MGP_BALBcJ_G0001313.1 mouse_genomes_project 3 155117656 155119237 + TEC TEC MGP_BALBcJ_T0060033.1 MGP_BALBcJ_G0027045.1 mouse_genomes_project 3 11322907 11351754 + MGP_BALBcJ_P0060033 Slc7a12 protein_coding protein_coding MGP_BALBcJ_T0060034.1 MGP_BALBcJ_G0027045.1 mouse_genomes_project 3 11322910 11351648 + MGP_BALBcJ_P0060034 Slc7a12 protein_coding protein_coding MGP_BALBcJ_T0060035.1 MGP_BALBcJ_G0027045.1 mouse_genomes_project 3 11322983 11351648 + MGP_BALBcJ_P0060035 Slc7a12 protein_coding protein_coding MGP_BALBcJ_T0004349.1 MGP_BALBcJ_G0003799.1 mouse_genomes_project 3 125052100 125058930 + Gm16958 antisense antisense MGP_BALBcJ_T0004350.1 MGP_BALBcJ_G0003799.1 mouse_genomes_project 3 125052134 125057959 + Gm16958 antisense antisense MGP_BALBcJ_T0061689.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86292645 86298710 - MGP_BALBcJ_P0061689 Rusc1 protein_coding protein_coding MGP_BALBcJ_T0061690.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86292645 86301955 - MGP_BALBcJ_P0061690 Rusc1 protein_coding protein_coding MGP_BALBcJ_T0061691.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86292645 86301976 - MGP_BALBcJ_P0061691 Rusc1 protein_coding protein_coding MGP_BALBcJ_T0061692.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86295785 86298406 - Rusc1 protein_coding retained_intron MGP_BALBcJ_T0061693.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86296885 86298640 - MGP_BALBcJ_P0061693 Rusc1 protein_coding protein_coding MGP_BALBcJ_T0061694.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86297719 86298420 - Rusc1 protein_coding retained_intron MGP_BALBcJ_T0061695.1 MGP_BALBcJ_G0027387.1 mouse_genomes_project 3 86297903 86298640 - MGP_BALBcJ_P0061695 Rusc1 protein_coding protein_coding MGP_BALBcJ_T0063208.1 MGP_BALBcJ_G0027756.1 mouse_genomes_project 3 106448455 106494356 - MGP_BALBcJ_P0063208 Gpsm2 protein_coding protein_coding MGP_BALBcJ_T0063209.1 MGP_BALBcJ_G0027756.1 mouse_genomes_project 3 106473470 106474560 - Gpsm2 protein_coding retained_intron MGP_BALBcJ_T0063210.1 MGP_BALBcJ_G0027756.1 mouse_genomes_project 3 106473886 106483713 - MGP_BALBcJ_P0063210 Gpsm2 protein_coding protein_coding MGP_BALBcJ_T0063211.1 MGP_BALBcJ_G0027756.1 mouse_genomes_project 3 106475022 106494163 - Gpsm2 protein_coding processed_transcript MGP_BALBcJ_T0062379.1 MGP_BALBcJ_G0027558.1 mouse_genomes_project 3 93088537 93117978 + MGP_BALBcJ_P0062379 Hormad1 protein_coding protein_coding MGP_BALBcJ_T0062380.1 MGP_BALBcJ_G0027558.1 mouse_genomes_project 3 93088538 93117666 + MGP_BALBcJ_P0062380 Hormad1 protein_coding protein_coding MGP_BALBcJ_T0062381.1 MGP_BALBcJ_G0027558.1 mouse_genomes_project 3 93088538 93115977 + MGP_BALBcJ_P0062381 Hormad1 protein_coding protein_coding MGP_BALBcJ_T0062382.1 MGP_BALBcJ_G0027558.1 mouse_genomes_project 3 93088538 93117617 + MGP_BALBcJ_P0062382 Hormad1 protein_coding protein_coding MGP_BALBcJ_T0062508.1 MGP_BALBcJ_G0027581.1 mouse_genomes_project 3 93761750 93762270 - MGP_BALBcJ_P0062508 Hist2h2ac protein_coding protein_coding MGP_BALBcJ_T0062170.1 MGP_BALBcJ_G0027522.1 mouse_genomes_project 3 91859946 91870759 - MGP_BALBcJ_P0062170 Riiad1 protein_coding protein_coding MGP_BALBcJ_T0062171.1 MGP_BALBcJ_G0027522.1 mouse_genomes_project 3 91859948 91877748 - Riiad1 protein_coding processed_transcript MGP_BALBcJ_T0062172.1 MGP_BALBcJ_G0027522.1 mouse_genomes_project 3 91863669 91870090 - Riiad1 protein_coding processed_transcript MGP_BALBcJ_T0014005.1 MGP_BALBcJ_G0012102.1 mouse_genomes_project 3 44968915 44970140 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010501.1 MGP_BALBcJ_G0008626.1 mouse_genomes_project 3 70264046 70264156 + Gm24544 miRNA miRNA MGP_BALBcJ_T0060663.1 MGP_BALBcJ_G0027163.1 mouse_genomes_project 3 46685733 46699692 - MGP_BALBcJ_P0060663 Pcdh18 protein_coding protein_coding MGP_BALBcJ_T0060664.1 MGP_BALBcJ_G0027163.1 mouse_genomes_project 3 46685735 46699661 - MGP_BALBcJ_P0060664 Pcdh18 protein_coding protein_coding MGP_BALBcJ_T0060665.1 MGP_BALBcJ_G0027163.1 mouse_genomes_project 3 46687715 46699701 - Pcdh18 protein_coding processed_transcript MGP_BALBcJ_T0060666.1 MGP_BALBcJ_G0027163.1 mouse_genomes_project 3 46694792 46697841 - MGP_BALBcJ_P0060666 Pcdh18 protein_coding protein_coding MGP_BALBcJ_T0060667.1 MGP_BALBcJ_G0027163.1 mouse_genomes_project 3 46697202 46699659 - Pcdh18 protein_coding processed_transcript MGP_BALBcJ_T0062484.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93648507 93685300 + MGP_BALBcJ_P0062484 Otud7b protein_coding protein_coding MGP_BALBcJ_T0062485.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93648507 93705439 + MGP_BALBcJ_P0062485 Otud7b protein_coding protein_coding MGP_BALBcJ_T0062486.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93648507 93705439 + MGP_BALBcJ_P0062486 Otud7b protein_coding protein_coding MGP_BALBcJ_T0062487.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93648507 93688581 + MGP_BALBcJ_P0062487 Otud7b protein_coding protein_coding MGP_BALBcJ_T0062488.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93648526 93675021 + Otud7b protein_coding processed_transcript MGP_BALBcJ_T0062489.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93648528 93685335 + Otud7b protein_coding processed_transcript MGP_BALBcJ_T0062490.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93651070 93705439 + MGP_BALBcJ_P0062490 Otud7b protein_coding protein_coding MGP_BALBcJ_T0062491.1 MGP_BALBcJ_G0027575.1 mouse_genomes_project 3 93694945 93696805 + Otud7b protein_coding processed_transcript MGP_BALBcJ_T0063035.1 MGP_BALBcJ_G0027712.1 mouse_genomes_project 3 104828381 104835244 + MGP_BALBcJ_P0063035 Kcna2 protein_coding protein_coding MGP_BALBcJ_T0063036.1 MGP_BALBcJ_G0027712.1 mouse_genomes_project 3 104828802 104838186 + MGP_BALBcJ_P0063036 Kcna2 protein_coding protein_coding MGP_BALBcJ_T0063037.1 MGP_BALBcJ_G0027712.1 mouse_genomes_project 3 104829917 104833208 + MGP_BALBcJ_P0063037 Kcna2 protein_coding protein_coding MGP_BALBcJ_T0062107.1 MGP_BALBcJ_G0027489.1 mouse_genomes_project 3 90084352 90086385 - MGP_BALBcJ_P0062107 Lce1g protein_coding protein_coding MGP_BALBcJ_T0063964.1 MGP_BALBcJ_G0027898.1 mouse_genomes_project 3 136162721 136178577 + MGP_BALBcJ_P0063964 Adh6a protein_coding protein_coding MGP_BALBcJ_T0063965.1 MGP_BALBcJ_G0027898.1 mouse_genomes_project 3 136162721 136179173 + MGP_BALBcJ_P0063965 Adh6a protein_coding protein_coding MGP_BALBcJ_T0007438.1 MGP_BALBcJ_G0006094.1 mouse_genomes_project 3 12024143 12042313 - Gm33819 lincRNA lincRNA MGP_BALBcJ_T0062810.1 MGP_BALBcJ_G0027663.1 mouse_genomes_project 3 100805362 100871217 + MGP_BALBcJ_P0062810 Dennd2c protein_coding protein_coding MGP_BALBcJ_T0062811.1 MGP_BALBcJ_G0027663.1 mouse_genomes_project 3 100805418 100858738 + Dennd2c protein_coding retained_intron MGP_BALBcJ_T0062812.1 MGP_BALBcJ_G0027663.1 mouse_genomes_project 3 100830380 100871186 + MGP_BALBcJ_P0062812 Dennd2c protein_coding protein_coding MGP_BALBcJ_T0062813.1 MGP_BALBcJ_G0027663.1 mouse_genomes_project 3 100841975 100870112 + Dennd2c protein_coding processed_transcript MGP_BALBcJ_T0062814.1 MGP_BALBcJ_G0027663.1 mouse_genomes_project 3 100842435 100871179 + Dennd2c protein_coding retained_intron MGP_BALBcJ_T0062815.1 MGP_BALBcJ_G0027663.1 mouse_genomes_project 3 100850627 100859973 + Dennd2c protein_coding retained_intron MGP_BALBcJ_T0062307.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92699045 92736087 - MGP_BALBcJ_P0062307 Gabpb2 protein_coding protein_coding MGP_BALBcJ_T0062308.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92703245 92708494 - Gabpb2 protein_coding retained_intron MGP_BALBcJ_T0062309.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92703381 92735839 - Gabpb2 protein_coding retained_intron MGP_BALBcJ_T0062310.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92714531 92736046 - Gabpb2 protein_coding retained_intron MGP_BALBcJ_T0062311.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92716661 92736046 - Gabpb2 protein_coding retained_intron MGP_BALBcJ_T0062312.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92720104 92735884 - MGP_BALBcJ_P0062312 Gabpb2 protein_coding protein_coding MGP_BALBcJ_T0062313.1 MGP_BALBcJ_G0027545.1 mouse_genomes_project 3 92733365 92735824 - Gabpb2 protein_coding processed_transcript MGP_BALBcJ_T0098924.1 MGP_BALBcJ_G0036971.1 mouse_genomes_project 3 102553409 102554950 - Gm42658 sense_intronic sense_intronic MGP_BALBcJ_T0060484.1 MGP_BALBcJ_G0027134.1 mouse_genomes_project 3 33477731 33515810 - MGP_BALBcJ_P0060484 Bbs7 protein_coding protein_coding MGP_BALBcJ_T0060485.1 MGP_BALBcJ_G0027134.1 mouse_genomes_project 3 33477731 33515898 - MGP_BALBcJ_P0060485 Bbs7 protein_coding protein_coding MGP_BALBcJ_T0060486.1 MGP_BALBcJ_G0027134.1 mouse_genomes_project 3 33479460 33515706 - MGP_BALBcJ_P0060486 Bbs7 protein_coding protein_coding MGP_BALBcJ_T0060487.1 MGP_BALBcJ_G0027134.1 mouse_genomes_project 3 33480366 33481875 - Bbs7 protein_coding retained_intron MGP_BALBcJ_T0060488.1 MGP_BALBcJ_G0027134.1 mouse_genomes_project 3 33511757 33515810 - Bbs7 protein_coding retained_intron MGP_BALBcJ_T0060489.1 MGP_BALBcJ_G0027134.1 mouse_genomes_project 3 33512602 33515810 - MGP_BALBcJ_P0060489 Bbs7 protein_coding protein_coding MGP_BALBcJ_T0014358.1 MGP_BALBcJ_G0012455.1 mouse_genomes_project 3 151769768 151770061 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014117.1 MGP_BALBcJ_G0012214.1 mouse_genomes_project 3 76022948 76023493 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098890.1 MGP_BALBcJ_G0036937.1 mouse_genomes_project 3 98252884 98258099 - Gm43466 sense_intronic sense_intronic MGP_BALBcJ_T0061034.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63011989 63017699 - MGP_BALBcJ_P0061034 Ccnl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0061035.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63012236 63024286 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061036.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63012236 63024336 - MGP_BALBcJ_P0061036 Ccnl1 protein_coding protein_coding MGP_BALBcJ_T0061037.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63012280 63024119 - MGP_BALBcJ_P0061037 Ccnl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061038.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63012594 63024250 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061039.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63012867 63014082 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061040.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63014037 63022943 - MGP_BALBcJ_P0061040 Ccnl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061041.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63014591 63017061 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061042.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63014975 63024268 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061043.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63015984 63022976 - MGP_BALBcJ_P0061043 Ccnl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061044.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63016489 63017952 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061045.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63017331 63019076 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061046.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63017516 63023740 - Ccnl1 protein_coding retained_intron MGP_BALBcJ_T0061047.1 MGP_BALBcJ_G0027247.1 mouse_genomes_project 3 63021329 63024215 - MGP_BALBcJ_P0061047 Ccnl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0007550.1 MGP_BALBcJ_G0006179.1 mouse_genomes_project 3 72780773 72789130 - Platr10 lincRNA lincRNA MGP_BALBcJ_T0007551.1 MGP_BALBcJ_G0006179.1 mouse_genomes_project 3 72781167 72781985 - Platr10 lincRNA lincRNA MGP_BALBcJ_T0102461.1 MGP_BALBcJ_G0040277.1 mouse_genomes_project 3 61140978 61158081 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0064361.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934096 151939121 - MGP_BALBcJ_P0064361 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064362.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934098 151938955 - MGP_BALBcJ_P0064362 Rabggtb protein_coding protein_coding MGP_BALBcJ_T0064363.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934098 151939819 - MGP_BALBcJ_P0064363 Rabggtb protein_coding protein_coding MGP_BALBcJ_T0064364.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934100 151939737 - MGP_BALBcJ_P0064364 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064365.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934102 151939803 - MGP_BALBcJ_P0064365 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064366.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934263 151938891 - MGP_BALBcJ_P0064366 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064367.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934381 151938891 - MGP_BALBcJ_P0064367 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064368.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934381 151938891 - MGP_BALBcJ_P0064368 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064369.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934381 151938891 - MGP_BALBcJ_P0064369 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064370.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151934884 151938843 - MGP_BALBcJ_P0064370 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064371.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151936223 151939765 - MGP_BALBcJ_P0064371 Rabggtb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064372.1 MGP_BALBcJ_G0027970.1 mouse_genomes_project 3 151938795 151939741 - Rabggtb protein_coding processed_transcript MGP_BALBcJ_T0001318.1 MGP_BALBcJ_G0001241.1 mouse_genomes_project 3 124545222 124546864 + TEC TEC MGP_BALBcJ_T0098365.1 MGP_BALBcJ_G0036419.1 mouse_genomes_project 3 82156749 82157274 - pseudogene pseudogene MGP_BALBcJ_T0101910.1 MGP_BALBcJ_G0039794.1 mouse_genomes_project 3 125382021 125383771 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101015.1 MGP_BALBcJ_G0039051.1 mouse_genomes_project 3 3785706 3785819 + Gm22074 snoRNA snoRNA MGP_BALBcJ_T0060797.1 MGP_BALBcJ_G0027189.1 mouse_genomes_project 3 51663056 51712817 + MGP_BALBcJ_P0060797 Smad9 protein_coding protein_coding MGP_BALBcJ_T0001380.1 MGP_BALBcJ_G0001302.1 mouse_genomes_project 3 150977599 150978584 + TEC TEC MGP_BALBcJ_T0063706.1 MGP_BALBcJ_G0027847.1 mouse_genomes_project 3 127792588 127809584 + MGP_BALBcJ_P0063706 Pla2g12a protein_coding protein_coding MGP_BALBcJ_T0063707.1 MGP_BALBcJ_G0027847.1 mouse_genomes_project 3 127792796 127808698 + MGP_BALBcJ_P0063707 Pla2g12a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063708.1 MGP_BALBcJ_G0027847.1 mouse_genomes_project 3 127795150 127808716 + MGP_BALBcJ_P0063708 Pla2g12a protein_coding protein_coding MGP_BALBcJ_T0063709.1 MGP_BALBcJ_G0027847.1 mouse_genomes_project 3 127806588 127809580 + Pla2g12a protein_coding retained_intron MGP_BALBcJ_T0102480.1 MGP_BALBcJ_G0040296.1 mouse_genomes_project 3 91033540 91033736 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007448.1 MGP_BALBcJ_G0006098.1 mouse_genomes_project 3 15355105 15367297 - 4930433B08Rik lincRNA lincRNA MGP_BALBcJ_T0001377.1 MGP_BALBcJ_G0001299.1 mouse_genomes_project 3 150406397 150407814 - TEC TEC MGP_BALBcJ_T0063382.1 MGP_BALBcJ_G0027790.1 mouse_genomes_project 3 114805202 114856613 - MGP_BALBcJ_P0063382 Palmd protein_coding protein_coding MGP_BALBcJ_T0063383.1 MGP_BALBcJ_G0027790.1 mouse_genomes_project 3 114808567 114856484 - MGP_BALBcJ_P0063383 Palmd protein_coding protein_coding MGP_BALBcJ_T0063384.1 MGP_BALBcJ_G0027790.1 mouse_genomes_project 3 114813976 114856612 - MGP_BALBcJ_P0063384 Palmd protein_coding protein_coding MGP_BALBcJ_T0063385.1 MGP_BALBcJ_G0027790.1 mouse_genomes_project 3 114852670 114856369 - Palmd protein_coding retained_intron MGP_BALBcJ_T0061002.1 MGP_BALBcJ_G0027236.1 mouse_genomes_project 3 60852809 60869434 - MGP_BALBcJ_P0061002 E130311K13Rik protein_coding protein_coding MGP_BALBcJ_T0061003.1 MGP_BALBcJ_G0027236.1 mouse_genomes_project 3 60862385 60869353 - E130311K13Rik protein_coding processed_transcript MGP_BALBcJ_T0061004.1 MGP_BALBcJ_G0027236.1 mouse_genomes_project 3 60866824 60869353 - E130311K13Rik protein_coding retained_intron MGP_BALBcJ_T0062199.1 MGP_BALBcJ_G0027527.1 mouse_genomes_project 3 92103940 92130944 + MGP_BALBcJ_P0062199 protein_coding protein_coding MGP_BALBcJ_T0062200.1 MGP_BALBcJ_G0027527.1 mouse_genomes_project 3 92104031 92130951 + MGP_BALBcJ_P0062200 protein_coding protein_coding MGP_BALBcJ_T0062203.1 MGP_BALBcJ_G0027527.1 mouse_genomes_project 3 92129603 92425894 + protein_coding retained_intron MGP_BALBcJ_T0062204.1 MGP_BALBcJ_G0027527.1 mouse_genomes_project 3 92129603 92426293 + MGP_BALBcJ_P0062204 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014122.1 MGP_BALBcJ_G0012219.1 mouse_genomes_project 3 78746754 78747539 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0062376.1 MGP_BALBcJ_G0027556.1 mouse_genomes_project 3 93027825 93037856 + MGP_BALBcJ_P0062376 Ctsk protein_coding protein_coding MGP_BALBcJ_T0098584.1 MGP_BALBcJ_G0036638.1 mouse_genomes_project 3 1162913 1163032 + n-R5s194 rRNA rRNA MGP_BALBcJ_T0013919.1 MGP_BALBcJ_G0012016.1 mouse_genomes_project 3 14549328 14549668 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017933.1 MGP_BALBcJ_G0015450.1 mouse_genomes_project 3 92522411 92523863 + 4930481B07Rik processed_transcript lincRNA MGP_BALBcJ_T0017934.1 MGP_BALBcJ_G0015450.1 mouse_genomes_project 3 92523035 92526941 + 4930481B07Rik processed_transcript processed_transcript MGP_BALBcJ_T0010531.1 MGP_BALBcJ_G0008656.1 mouse_genomes_project 3 120191310 120191429 - Mir760 miRNA miRNA MGP_BALBcJ_T0099788.1 MGP_BALBcJ_G0037824.1 mouse_genomes_project 3 121303374 121303504 - Gm22713 snRNA snRNA MGP_BALBcJ_T0102489.1 MGP_BALBcJ_G0040305.1 mouse_genomes_project 3 100520948 100521355 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0062412.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270477 93281456 - Tars2 protein_coding retained_intron MGP_BALBcJ_T0062413.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270477 93285809 - MGP_BALBcJ_P0062413 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062414.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270477 93285773 - MGP_BALBcJ_P0062414 Tars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062415.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270477 93285789 - MGP_BALBcJ_P0062415 Tars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062416.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270477 93285800 - MGP_BALBcJ_P0062416 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062417.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270477 93285809 - MGP_BALBcJ_P0062417 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062418.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93270520 93272648 - Tars2 protein_coding processed_transcript MGP_BALBcJ_T0062419.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93274354 93285821 - MGP_BALBcJ_P0062419 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062420.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93276286 93279035 - Tars2 protein_coding processed_transcript MGP_BALBcJ_T0062421.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93278017 93285809 - MGP_BALBcJ_P0062421 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062422.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93278051 93285776 - MGP_BALBcJ_P0062422 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062423.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93279054 93285809 - MGP_BALBcJ_P0062423 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062424.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93279077 93285293 - Tars2 protein_coding processed_transcript MGP_BALBcJ_T0062425.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93279079 93285787 - MGP_BALBcJ_P0062425 Tars2 protein_coding protein_coding MGP_BALBcJ_T0062426.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93280716 93281456 - Tars2 protein_coding retained_intron MGP_BALBcJ_T0062427.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93280842 93285755 - Tars2 protein_coding processed_transcript MGP_BALBcJ_T0062428.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93281177 93285410 - Tars2 protein_coding retained_intron MGP_BALBcJ_T0062429.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93281241 93285787 - MGP_BALBcJ_P0062429 Tars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062430.1 MGP_BALBcJ_G0027564.1 mouse_genomes_project 3 93285743 93291117 - MGP_BALBcJ_P0062430 Tars2 protein_coding protein_coding MGP_BALBcJ_T0013983.1 MGP_BALBcJ_G0012080.1 mouse_genomes_project 3 36110874 36111160 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004309.1 MGP_BALBcJ_G0003776.1 mouse_genomes_project 3 102720589 102730632 + Gm42956 antisense antisense MGP_BALBcJ_T0013937.1 MGP_BALBcJ_G0012034.1 mouse_genomes_project 3 19179680 19180699 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014048.1 MGP_BALBcJ_G0012145.1 mouse_genomes_project 3 56650640 56651041 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004246.1 MGP_BALBcJ_G0003735.1 mouse_genomes_project 3 78211492 78214523 - Gm16000 antisense antisense MGP_BALBcJ_T0060654.1 MGP_BALBcJ_G0027161.1 mouse_genomes_project 3 42206799 42211435 + MGP_BALBcJ_P0060654 Pcdh10 protein_coding protein_coding MGP_BALBcJ_T0060655.1 MGP_BALBcJ_G0027161.1 mouse_genomes_project 3 42206807 42231579 + MGP_BALBcJ_P0060655 Pcdh10 protein_coding protein_coding MGP_BALBcJ_T0060656.1 MGP_BALBcJ_G0027161.1 mouse_genomes_project 3 42206826 42266414 + MGP_BALBcJ_P0060656 Pcdh10 protein_coding protein_coding MGP_BALBcJ_T0060657.1 MGP_BALBcJ_G0027161.1 mouse_genomes_project 3 42206828 42254502 + MGP_BALBcJ_P0060657 Pcdh10 protein_coding protein_coding MGP_BALBcJ_T0060658.1 MGP_BALBcJ_G0027161.1 mouse_genomes_project 3 42211032 42263284 + Pcdh10 protein_coding processed_transcript MGP_BALBcJ_T0001310.1 MGP_BALBcJ_G0001233.1 mouse_genomes_project 3 121585107 121587770 - TEC TEC MGP_BALBcJ_T0061786.1 MGP_BALBcJ_G0027399.1 mouse_genomes_project 3 86454858 86456086 + Krtcap2 protein_coding retained_intron MGP_BALBcJ_T0061787.1 MGP_BALBcJ_G0027399.1 mouse_genomes_project 3 86455230 86458749 + MGP_BALBcJ_P0061787 Krtcap2 protein_coding protein_coding MGP_BALBcJ_T0061788.1 MGP_BALBcJ_G0027399.1 mouse_genomes_project 3 86455326 86458727 + MGP_BALBcJ_P0061788 Krtcap2 protein_coding protein_coding MGP_BALBcJ_T0061789.1 MGP_BALBcJ_G0027399.1 mouse_genomes_project 3 86457880 86458740 + Krtcap2 protein_coding retained_intron MGP_BALBcJ_T0004387.1 MGP_BALBcJ_G0003826.1 mouse_genomes_project 3 150683307 150697827 + AI115009 antisense antisense MGP_BALBcJ_T0060467.1 MGP_BALBcJ_G0027130.1 mouse_genomes_project 3 33352548 33381057 - MGP_BALBcJ_P0060467 Anxa5 protein_coding protein_coding MGP_BALBcJ_T0060468.1 MGP_BALBcJ_G0027130.1 mouse_genomes_project 3 33352789 33355954 - Anxa5 protein_coding retained_intron MGP_BALBcJ_T0060469.1 MGP_BALBcJ_G0027130.1 mouse_genomes_project 3 33355830 33380822 - MGP_BALBcJ_P0060469 Anxa5 protein_coding protein_coding MGP_BALBcJ_T0007525.1 MGP_BALBcJ_G0006160.1 mouse_genomes_project 3 51538958 51542154 + Gm26678 lincRNA lincRNA MGP_BALBcJ_T0062672.1 MGP_BALBcJ_G0027633.1 mouse_genomes_project 3 96548755 96566667 - MGP_BALBcJ_P0062672 Hao2 protein_coding protein_coding MGP_BALBcJ_T0014300.1 MGP_BALBcJ_G0012397.1 mouse_genomes_project 3 132038845 132039286 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101697.1 MGP_BALBcJ_G0039678.1 mouse_genomes_project 3 126740192 126740878 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0062290.1 MGP_BALBcJ_G0027542.1 mouse_genomes_project 3 92642611 92649996 + MGP_BALBcJ_P0062290 protein_coding protein_coding MGP_BALBcJ_T0061498.1 MGP_BALBcJ_G0027354.1 mouse_genomes_project 3 85294298 85296274 - MGP_BALBcJ_P0061498 Apoa1bp protein_coding protein_coding MGP_BALBcJ_T0013924.1 MGP_BALBcJ_G0012021.1 mouse_genomes_project 3 15639026 15639315 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001149.1 MGP_BALBcJ_G0001074.1 mouse_genomes_project 3 34546013 34549358 + TEC TEC MGP_BALBcJ_T0098929.1 MGP_BALBcJ_G0036976.1 mouse_genomes_project 3 103501379 103505581 - Gm43329 sense_intronic sense_intronic MGP_BALBcJ_T0062877.1 MGP_BALBcJ_G0027675.1 mouse_genomes_project 3 101630630 101683664 + MGP_BALBcJ_P0062877 Rsbn1 protein_coding protein_coding MGP_BALBcJ_T0062878.1 MGP_BALBcJ_G0027675.1 mouse_genomes_project 3 101630661 101683687 + MGP_BALBcJ_P0062878 Rsbn1 protein_coding protein_coding MGP_BALBcJ_T0062879.1 MGP_BALBcJ_G0027675.1 mouse_genomes_project 3 101631077 101680921 + MGP_BALBcJ_P0062879 Rsbn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062880.1 MGP_BALBcJ_G0027675.1 mouse_genomes_project 3 101645735 101677186 + MGP_BALBcJ_P0062880 Rsbn1 protein_coding protein_coding MGP_BALBcJ_T0014165.1 MGP_BALBcJ_G0012262.1 mouse_genomes_project 3 90862397 90862613 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014194.1 MGP_BALBcJ_G0012291.1 mouse_genomes_project 3 98356257 98356548 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063805.1 MGP_BALBcJ_G0027868.1 mouse_genomes_project 3 130948107 131076838 - MGP_BALBcJ_P0063805 protein_coding protein_coding MGP_BALBcJ_T0063806.1 MGP_BALBcJ_G0027868.1 mouse_genomes_project 3 130952396 130965993 - MGP_BALBcJ_P0063806 protein_coding protein_coding MGP_BALBcJ_T0063807.1 MGP_BALBcJ_G0027868.1 mouse_genomes_project 3 130995087 131076838 - MGP_BALBcJ_P0063807 protein_coding protein_coding MGP_BALBcJ_T0063808.1 MGP_BALBcJ_G0027868.1 mouse_genomes_project 3 131011626 131076898 - MGP_BALBcJ_P0063808 protein_coding protein_coding MGP_BALBcJ_T0102467.1 MGP_BALBcJ_G0040283.1 mouse_genomes_project 3 61981954 61982530 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061445.1 MGP_BALBcJ_G0027341.1 mouse_genomes_project 3 85015255 85032176 - MGP_BALBcJ_P0061445 Ntrk1 protein_coding protein_coding MGP_BALBcJ_T0060148.1 MGP_BALBcJ_G0027074.1 mouse_genomes_project 3 17129946 17132643 - Cpb1 protein_coding retained_intron MGP_BALBcJ_T0060149.1 MGP_BALBcJ_G0027074.1 mouse_genomes_project 3 17129971 17156325 - MGP_BALBcJ_P0060149 Cpb1 protein_coding protein_coding MGP_BALBcJ_T0060150.1 MGP_BALBcJ_G0027074.1 mouse_genomes_project 3 17144784 17147039 - Cpb1 protein_coding processed_transcript MGP_BALBcJ_T0060061.1 MGP_BALBcJ_G0027053.1 mouse_genomes_project 3 12175190 12208739 - MGP_BALBcJ_P0060061 Gm9733 protein_coding protein_coding MGP_BALBcJ_T0063250.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107117244 107461873 + MGP_BALBcJ_P0063250 Vav3 protein_coding protein_coding MGP_BALBcJ_T0063251.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107117274 107344651 + Vav3 protein_coding retained_intron MGP_BALBcJ_T0063252.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107117630 107461875 + MGP_BALBcJ_P0063252 Vav3 protein_coding unknown_likely_coding MGP_BALBcJ_T0063253.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107117697 107224767 + Vav3 protein_coding processed_transcript MGP_BALBcJ_T0063254.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107276438 107285345 + Vav3 protein_coding processed_transcript MGP_BALBcJ_T0063255.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107355019 107461869 + MGP_BALBcJ_P0063255 Vav3 protein_coding protein_coding MGP_BALBcJ_T0063256.1 MGP_BALBcJ_G0027766.1 mouse_genomes_project 3 107424738 107459078 + Vav3 protein_coding processed_transcript MGP_BALBcJ_T0004211.1 MGP_BALBcJ_G0003706.1 mouse_genomes_project 3 33952794 33961035 - Gm12531 antisense antisense MGP_BALBcJ_T0004212.1 MGP_BALBcJ_G0003706.1 mouse_genomes_project 3 33952796 33961030 - Gm12531 antisense antisense MGP_BALBcJ_T0004243.1 MGP_BALBcJ_G0003732.1 mouse_genomes_project 3 76350508 76392084 + 4921511C10Rik antisense antisense MGP_BALBcJ_T0007712.1 MGP_BALBcJ_G0006306.1 mouse_genomes_project 3 141223720 141226927 + Gm43612 lincRNA lincRNA MGP_BALBcJ_T0013911.1 MGP_BALBcJ_G0012008.1 mouse_genomes_project 3 11484344 11484633 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063664.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127103083 127122749 + MGP_BALBcJ_P0063664 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0063665.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127103127 127122737 + MGP_BALBcJ_P0063665 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0063666.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127103131 127122750 + MGP_BALBcJ_P0063666 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0063667.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127103174 127107783 + MGP_BALBcJ_P0063667 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0063668.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127107152 127122056 + MGP_BALBcJ_P0063668 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0063669.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127117090 127119933 + Pitx2 protein_coding retained_intron MGP_BALBcJ_T0063670.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127117130 127122747 + MGP_BALBcJ_P0063670 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0063671.1 MGP_BALBcJ_G0027839.1 mouse_genomes_project 3 127117433 127119783 + MGP_BALBcJ_P0063671 Pitx2 protein_coding protein_coding MGP_BALBcJ_T0007509.1 MGP_BALBcJ_G0006146.1 mouse_genomes_project 3 45703802 45716221 - Gm37190 lincRNA lincRNA MGP_BALBcJ_T0014212.1 MGP_BALBcJ_G0012309.1 mouse_genomes_project 3 102137987 102138702 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102498.1 MGP_BALBcJ_G0040314.1 mouse_genomes_project 3 111038390 111065659 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014207.1 MGP_BALBcJ_G0012304.1 mouse_genomes_project 3 100881394 100882149 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098908.1 MGP_BALBcJ_G0036955.1 mouse_genomes_project 3 101580063 101582153 + Gm43065 sense_intronic sense_intronic MGP_BALBcJ_T0062437.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93362587 93389596 - MGP_BALBcJ_P0062437 Prpf3 protein_coding protein_coding MGP_BALBcJ_T0062438.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93363052 93368128 - MGP_BALBcJ_P0062438 Prpf3 protein_coding protein_coding MGP_BALBcJ_T0062439.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93363081 93382803 - Prpf3 protein_coding retained_intron MGP_BALBcJ_T0062440.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93363085 93365271 - Prpf3 protein_coding retained_intron MGP_BALBcJ_T0062441.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93363085 93389464 - MGP_BALBcJ_P0062441 Prpf3 protein_coding protein_coding MGP_BALBcJ_T0062442.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93368951 93378396 - Prpf3 protein_coding processed_transcript MGP_BALBcJ_T0062443.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93377033 93379405 - Prpf3 protein_coding retained_intron MGP_BALBcJ_T0062444.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93380671 93386861 - MGP_BALBcJ_P0062444 Prpf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062445.1 MGP_BALBcJ_G0027566.1 mouse_genomes_project 3 93382764 93389492 - Prpf3 protein_coding retained_intron MGP_BALBcJ_T0007537.1 MGP_BALBcJ_G0006167.1 mouse_genomes_project 3 60371150 60397545 + Gm34240 lincRNA lincRNA MGP_BALBcJ_T0060940.1 MGP_BALBcJ_G0027226.1 mouse_genomes_project 3 56988838 56994482 + MGP_BALBcJ_P0060940 Sucnr1 protein_coding protein_coding MGP_BALBcJ_T0060941.1 MGP_BALBcJ_G0027226.1 mouse_genomes_project 3 56988871 56993241 + Sucnr1 protein_coding processed_transcript MGP_BALBcJ_T0001141.1 MGP_BALBcJ_G0001066.1 mouse_genomes_project 3 32732475 32733033 + TEC TEC MGP_BALBcJ_T0013908.1 MGP_BALBcJ_G0012005.1 mouse_genomes_project 3 11227373 11227852 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010496.1 MGP_BALBcJ_G0008621.1 mouse_genomes_project 3 48162001 48162067 + Gm24282 miRNA miRNA MGP_BALBcJ_T0061199.1 MGP_BALBcJ_G0027285.1 mouse_genomes_project 3 76596826 76710444 - MGP_BALBcJ_P0061199 Fnip2 protein_coding protein_coding MGP_BALBcJ_T0061200.1 MGP_BALBcJ_G0027285.1 mouse_genomes_project 3 76598315 76607636 - Fnip2 protein_coding retained_intron MGP_BALBcJ_T0061201.1 MGP_BALBcJ_G0027285.1 mouse_genomes_project 3 76600723 76710330 - MGP_BALBcJ_P0061201 Fnip2 protein_coding protein_coding MGP_BALBcJ_T0061202.1 MGP_BALBcJ_G0027285.1 mouse_genomes_project 3 76601022 76641940 - Fnip2 protein_coding retained_intron MGP_BALBcJ_T0061203.1 MGP_BALBcJ_G0027285.1 mouse_genomes_project 3 76645646 76656343 - Fnip2 protein_coding processed_transcript MGP_BALBcJ_T0061204.1 MGP_BALBcJ_G0027285.1 mouse_genomes_project 3 76647190 76710327 - Fnip2 protein_coding retained_intron MGP_BALBcJ_T0014121.1 MGP_BALBcJ_G0012218.1 mouse_genomes_project 3 78580286 78580566 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099055.1 MGP_BALBcJ_G0037092.1 mouse_genomes_project 3 152690626 152713973 + Gm38139 sense_overlapping sense_overlapping MGP_BALBcJ_T0001186.1 MGP_BALBcJ_G0001111.1 mouse_genomes_project 3 48548740 48549841 + TEC TEC MGP_BALBcJ_T0001117.1 MGP_BALBcJ_G0001042.1 mouse_genomes_project 3 24361265 24362494 + TEC TEC MGP_BALBcJ_T0013947.1 MGP_BALBcJ_G0012044.1 mouse_genomes_project 3 25061185 25061429 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098905.1 MGP_BALBcJ_G0036952.1 mouse_genomes_project 3 101477961 101479383 - Gm43149 sense_intronic sense_intronic MGP_BALBcJ_T0064146.1 MGP_BALBcJ_G0027936.1 mouse_genomes_project 3 143940009 143975950 + MGP_BALBcJ_P0064146 Syde2 protein_coding protein_coding MGP_BALBcJ_T0064147.1 MGP_BALBcJ_G0027936.1 mouse_genomes_project 3 143940792 143975950 + MGP_BALBcJ_P0064147 Syde2 protein_coding protein_coding MGP_BALBcJ_T0064148.1 MGP_BALBcJ_G0027936.1 mouse_genomes_project 3 143940942 143974486 + MGP_BALBcJ_P0064148 Syde2 protein_coding unknown_likely_coding MGP_BALBcJ_T0064149.1 MGP_BALBcJ_G0027936.1 mouse_genomes_project 3 143946497 143950993 + Syde2 protein_coding processed_transcript MGP_BALBcJ_T0013979.1 MGP_BALBcJ_G0012076.1 mouse_genomes_project 3 35115000 35115343 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007755.1 MGP_BALBcJ_G0006338.1 mouse_genomes_project 3 151814015 151816788 - 5730460C07Rik lincRNA lincRNA MGP_BALBcJ_T0062080.1 MGP_BALBcJ_G0027465.1 mouse_genomes_project 3 89671493 89673245 + MGP_BALBcJ_P0062080 Sprr2d protein_coding protein_coding MGP_BALBcJ_T0014248.1 MGP_BALBcJ_G0012345.1 mouse_genomes_project 3 112415219 112415571 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064413.1 MGP_BALBcJ_G0027978.1 mouse_genomes_project 3 153121182 153129658 - MGP_BALBcJ_P0064413 Fpgt protein_coding protein_coding MGP_BALBcJ_T0064414.1 MGP_BALBcJ_G0027978.1 mouse_genomes_project 3 153123983 153129452 - Fpgt protein_coding processed_transcript MGP_BALBcJ_T0064415.1 MGP_BALBcJ_G0027978.1 mouse_genomes_project 3 153125292 153126784 - Fpgt protein_coding retained_intron MGP_BALBcJ_T0064416.1 MGP_BALBcJ_G0027978.1 mouse_genomes_project 3 153127207 153129623 - Fpgt protein_coding retained_intron MGP_BALBcJ_T0064417.1 MGP_BALBcJ_G0027978.1 mouse_genomes_project 3 153127579 153128810 - Fpgt protein_coding processed_transcript MGP_BALBcJ_T0064418.1 MGP_BALBcJ_G0027978.1 mouse_genomes_project 3 153127664 153129482 - Fpgt protein_coding processed_transcript MGP_BALBcJ_T0017982.1 MGP_BALBcJ_G0015468.1 mouse_genomes_project 3 146970460 146972406 + Gm43572 processed_transcript processed_transcript MGP_BALBcJ_T0014113.1 MGP_BALBcJ_G0012210.1 mouse_genomes_project 3 75260091 75260640 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098916.1 MGP_BALBcJ_G0036963.1 mouse_genomes_project 3 101881810 101885088 - Gm43259 sense_intronic sense_intronic MGP_BALBcJ_T0063898.1 MGP_BALBcJ_G0027882.1 mouse_genomes_project 3 133930870 134207362 - MGP_BALBcJ_P0063898 Bank1 protein_coding protein_coding MGP_BALBcJ_T0063899.1 MGP_BALBcJ_G0027882.1 mouse_genomes_project 3 133930870 134207342 - MGP_BALBcJ_P0063899 Bank1 protein_coding protein_coding MGP_BALBcJ_T0063900.1 MGP_BALBcJ_G0027882.1 mouse_genomes_project 3 133930956 134207321 - MGP_BALBcJ_P0063900 Bank1 protein_coding protein_coding MGP_BALBcJ_T0063901.1 MGP_BALBcJ_G0027882.1 mouse_genomes_project 3 133931429 133932224 - Bank1 protein_coding retained_intron MGP_BALBcJ_T0063902.1 MGP_BALBcJ_G0027882.1 mouse_genomes_project 3 133931444 133933611 - Bank1 protein_coding retained_intron MGP_BALBcJ_T0063903.1 MGP_BALBcJ_G0027882.1 mouse_genomes_project 3 134089163 134126556 - Bank1 protein_coding retained_intron MGP_BALBcJ_T0101052.1 MGP_BALBcJ_G0039088.1 mouse_genomes_project 3 84279472 84279604 + Gm24472 snoRNA snoRNA MGP_BALBcJ_T0060202.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24774047 24781348 + Pld1 protein_coding processed_transcript MGP_BALBcJ_T0060203.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24774048 24852965 + MGP_BALBcJ_P0060203 Pld1 protein_coding protein_coding MGP_BALBcJ_T0060204.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24808725 24951010 + MGP_BALBcJ_P0060204 Pld1 protein_coding protein_coding MGP_BALBcJ_T0060205.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24843552 24952198 + MGP_BALBcJ_P0060205 Pld1 protein_coding protein_coding MGP_BALBcJ_T0060206.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24855539 24952322 + MGP_BALBcJ_P0060206 Pld1 protein_coding protein_coding MGP_BALBcJ_T0060207.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24865744 24873074 + Pld1 protein_coding processed_transcript MGP_BALBcJ_T0060208.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24887990 24904656 + Pld1 protein_coding retained_intron MGP_BALBcJ_T0060209.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24897159 24900478 + Pld1 protein_coding retained_intron MGP_BALBcJ_T0060210.1 MGP_BALBcJ_G0027086.1 mouse_genomes_project 3 24929148 24949755 + MGP_BALBcJ_P0060210 Pld1 protein_coding protein_coding MGP_BALBcJ_T0063809.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131146244 131218740 + MGP_BALBcJ_P0063809 Ppa2 protein_coding protein_coding MGP_BALBcJ_T0063810.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131146256 131218897 + MGP_BALBcJ_P0063810 Ppa2 protein_coding protein_coding MGP_BALBcJ_T0063811.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131146616 131211111 + Ppa2 protein_coding processed_transcript MGP_BALBcJ_T0063812.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131157610 131162710 + Ppa2 protein_coding retained_intron MGP_BALBcJ_T0063813.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131178255 131208593 + Ppa2 protein_coding processed_transcript MGP_BALBcJ_T0063814.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131178428 131218744 + Ppa2 protein_coding retained_intron MGP_BALBcJ_T0063815.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131188378 131218729 + MGP_BALBcJ_P0063815 Ppa2 protein_coding protein_coding MGP_BALBcJ_T0063816.1 MGP_BALBcJ_G0027869.1 mouse_genomes_project 3 131213077 131215111 + Ppa2 protein_coding retained_intron MGP_BALBcJ_T0004347.1 MGP_BALBcJ_G0003797.1 mouse_genomes_project 3 122274370 122276059 + Gm42823 antisense antisense MGP_BALBcJ_T0007515.1 MGP_BALBcJ_G0006151.1 mouse_genomes_project 3 49056822 49064526 - Gm30074 lincRNA lincRNA MGP_BALBcJ_T0007706.1 MGP_BALBcJ_G0006301.1 mouse_genomes_project 3 140733371 140746057 + 9530052C20Rik lincRNA lincRNA MGP_BALBcJ_T0062032.1 MGP_BALBcJ_G0027442.1 mouse_genomes_project 3 87762352 87773365 + MGP_BALBcJ_P0062032 S100a13 protein_coding protein_coding MGP_BALBcJ_T0007673.1 MGP_BALBcJ_G0006272.1 mouse_genomes_project 3 128683330 128685118 + Gm43522 lincRNA lincRNA MGP_BALBcJ_T0007674.1 MGP_BALBcJ_G0006272.1 mouse_genomes_project 3 128684255 128686177 + Gm43522 lincRNA lincRNA MGP_BALBcJ_T0101068.1 MGP_BALBcJ_G0039104.1 mouse_genomes_project 3 110001915 110002576 - Gm25519 snoRNA snoRNA MGP_BALBcJ_T0010508.1 MGP_BALBcJ_G0008633.1 mouse_genomes_project 3 85456471 85456560 + Mir9-1 miRNA miRNA MGP_BALBcJ_T0014306.1 MGP_BALBcJ_G0012403.1 mouse_genomes_project 3 133007495 133008084 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102485.1 MGP_BALBcJ_G0040301.1 mouse_genomes_project 3 91142513 91143611 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0061454.1 MGP_BALBcJ_G0027345.1 mouse_genomes_project 3 85143990 85153500 + MGP_BALBcJ_P0061454 Hdgf protein_coding protein_coding MGP_BALBcJ_T0061455.1 MGP_BALBcJ_G0027345.1 mouse_genomes_project 3 85144414 85152015 + MGP_BALBcJ_P0061455 Hdgf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061456.1 MGP_BALBcJ_G0027345.1 mouse_genomes_project 3 85144896 85151532 + Hdgf protein_coding processed_transcript MGP_BALBcJ_T0061457.1 MGP_BALBcJ_G0027345.1 mouse_genomes_project 3 85147398 85151548 + Hdgf protein_coding processed_transcript MGP_BALBcJ_T0061458.1 MGP_BALBcJ_G0027345.1 mouse_genomes_project 3 85151326 85152143 + Hdgf protein_coding retained_intron MGP_BALBcJ_T0059966.1 MGP_BALBcJ_G0027021.1 mouse_genomes_project 3 3475500 3480952 - MGP_BALBcJ_P0059966 1700008P02Rik protein_coding protein_coding MGP_BALBcJ_T0014068.1 MGP_BALBcJ_G0012165.1 mouse_genomes_project 3 63162703 63162962 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0063847.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133227293 133253240 + MGP_BALBcJ_P0063847 Slc9b1 protein_coding protein_coding MGP_BALBcJ_T0063848.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133227298 133278817 + MGP_BALBcJ_P0063848 Slc9b1 protein_coding protein_coding MGP_BALBcJ_T0063849.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133227310 133238551 + Slc9b1 protein_coding retained_intron MGP_BALBcJ_T0063850.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133227310 133238790 + Slc9b1 protein_coding retained_intron MGP_BALBcJ_T0063851.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133227322 133274073 + Slc9b1 protein_coding processed_transcript MGP_BALBcJ_T0063852.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133227594 133255962 + Slc9b1 protein_coding retained_intron MGP_BALBcJ_T0063853.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133254182 133255686 + Slc9b1 protein_coding retained_intron MGP_BALBcJ_T0063854.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133264012 133278814 + MGP_BALBcJ_P0063854 Slc9b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0063855.1 MGP_BALBcJ_G0027876.1 mouse_genomes_project 3 133274993 133278814 + Slc9b1 protein_coding processed_transcript MGP_BALBcJ_T0060887.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55394230 55426533 + MGP_BALBcJ_P0060887 Eif2a protein_coding protein_coding MGP_BALBcJ_T0060888.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55394451 55414861 + Eif2a protein_coding retained_intron MGP_BALBcJ_T0060889.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55394452 55424674 + MGP_BALBcJ_P0060889 Eif2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060890.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55394465 55426533 + MGP_BALBcJ_P0060890 Eif2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0060891.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55394712 55414626 + MGP_BALBcJ_P0060891 Eif2a protein_coding protein_coding MGP_BALBcJ_T0060892.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55412149 55414861 + Eif2a protein_coding retained_intron MGP_BALBcJ_T0060893.1 MGP_BALBcJ_G0027209.1 mouse_genomes_project 3 55413263 55419478 + Eif2a protein_coding retained_intron MGP_BALBcJ_T0062667.1 MGP_BALBcJ_G0027631.1 mouse_genomes_project 3 96483335 96494839 - MGP_BALBcJ_P0062667 Hsd3b6 protein_coding protein_coding MGP_BALBcJ_T0062668.1 MGP_BALBcJ_G0027631.1 mouse_genomes_project 3 96483336 96490223 - MGP_BALBcJ_P0062668 Hsd3b6 protein_coding protein_coding MGP_BALBcJ_T0062669.1 MGP_BALBcJ_G0027631.1 mouse_genomes_project 3 96485675 96494818 - Hsd3b6 protein_coding processed_transcript MGP_BALBcJ_T0063415.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119042911 119058995 - MGP_BALBcJ_P0063415 Rwdd3 protein_coding protein_coding MGP_BALBcJ_T0063416.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119042913 119044334 - Rwdd3 protein_coding retained_intron MGP_BALBcJ_T0063417.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119043356 119046372 - MGP_BALBcJ_P0063417 Rwdd3 protein_coding protein_coding MGP_BALBcJ_T0063418.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119043359 119058988 - MGP_BALBcJ_P0063418 Rwdd3 protein_coding protein_coding MGP_BALBcJ_T0063419.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119043378 119058994 - MGP_BALBcJ_P0063419 Rwdd3 protein_coding protein_coding MGP_BALBcJ_T0063420.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119043452 119058994 - MGP_BALBcJ_P0063420 Rwdd3 protein_coding protein_coding MGP_BALBcJ_T0063421.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119043791 119058995 - MGP_BALBcJ_P0063421 Rwdd3 protein_coding protein_coding MGP_BALBcJ_T0063422.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119045528 119058995 - Rwdd3 protein_coding retained_intron MGP_BALBcJ_T0063423.1 MGP_BALBcJ_G0027797.1 mouse_genomes_project 3 119056469 119058994 - Rwdd3 protein_coding retained_intron MGP_BALBcJ_T0061015.1 MGP_BALBcJ_G0027243.1 mouse_genomes_project 3 62178960 62427931 + Kcnab1 protein_coding processed_transcript MGP_BALBcJ_T0061016.1 MGP_BALBcJ_G0027243.1 mouse_genomes_project 3 62178960 62440426 + MGP_BALBcJ_P0061016 Kcnab1 protein_coding protein_coding MGP_BALBcJ_T0061017.1 MGP_BALBcJ_G0027243.1 mouse_genomes_project 3 62258458 62440430 + Kcnab1 protein_coding processed_transcript MGP_BALBcJ_T0061018.1 MGP_BALBcJ_G0027243.1 mouse_genomes_project 3 62316637 62439291 + Kcnab1 protein_coding processed_transcript MGP_BALBcJ_T0061019.1 MGP_BALBcJ_G0027243.1 mouse_genomes_project 3 62359898 62419231 + Kcnab1 protein_coding processed_transcript MGP_BALBcJ_T0061020.1 MGP_BALBcJ_G0027243.1 mouse_genomes_project 3 62415891 62420966 + Kcnab1 protein_coding retained_intron MGP_BALBcJ_T0001279.1 MGP_BALBcJ_G0001202.1 mouse_genomes_project 3 105620302 105620988 + TEC TEC MGP_BALBcJ_T0010536.1 MGP_BALBcJ_G0008661.1 mouse_genomes_project 3 125448376 125448442 + Mir302d miRNA miRNA MGP_BALBcJ_T0060882.1 MGP_BALBcJ_G0027207.1 mouse_genomes_project 3 55283318 55335456 + MGP_BALBcJ_P0060882 Tsc22d2 protein_coding protein_coding MGP_BALBcJ_T0060883.1 MGP_BALBcJ_G0027207.1 mouse_genomes_project 3 55283323 55330393 + MGP_BALBcJ_P0060883 Tsc22d2 protein_coding protein_coding MGP_BALBcJ_T0060884.1 MGP_BALBcJ_G0027207.1 mouse_genomes_project 3 55284481 55287503 + Tsc22d2 protein_coding retained_intron MGP_BALBcJ_T0060885.1 MGP_BALBcJ_G0027207.1 mouse_genomes_project 3 55286087 55328982 + MGP_BALBcJ_P0060885 Tsc22d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0061100.1 MGP_BALBcJ_G0027262.1 mouse_genomes_project 3 65936988 65939566 + MGP_BALBcJ_P0061100 1110032F04Rik protein_coding protein_coding MGP_BALBcJ_T0007485.1 MGP_BALBcJ_G0006131.1 mouse_genomes_project 3 34662311 34668572 + Gm42921 lincRNA lincRNA MGP_BALBcJ_T0061378.1 MGP_BALBcJ_G0027328.1 mouse_genomes_project 3 83746725 83749428 - MGP_BALBcJ_P0061378 Mab21l2 protein_coding protein_coding MGP_BALBcJ_T0061379.1 MGP_BALBcJ_G0027328.1 mouse_genomes_project 3 83747194 83749774 - Mab21l2 protein_coding processed_pseudogene MGP_BALBcJ_T0062816.1 MGP_BALBcJ_G0027664.1 mouse_genomes_project 3 100873094 100880858 + MGP_BALBcJ_P0062816 Bcas2 protein_coding protein_coding MGP_BALBcJ_T0062817.1 MGP_BALBcJ_G0027664.1 mouse_genomes_project 3 100873142 100880307 + Bcas2 protein_coding retained_intron MGP_BALBcJ_T0062818.1 MGP_BALBcJ_G0027664.1 mouse_genomes_project 3 100873188 100880309 + Bcas2 protein_coding retained_intron MGP_BALBcJ_T0062819.1 MGP_BALBcJ_G0027664.1 mouse_genomes_project 3 100873201 100879929 + MGP_BALBcJ_P0062819 Bcas2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062820.1 MGP_BALBcJ_G0027664.1 mouse_genomes_project 3 100873211 100880872 + MGP_BALBcJ_P0062820 Bcas2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0062821.1 MGP_BALBcJ_G0027664.1 mouse_genomes_project 3 100873224 100876029 + Bcas2 protein_coding retained_intron MGP_BALBcJ_T0066265.1 MGP_BALBcJ_G0028411.1 mouse_genomes_project 4 85715155 85719334 - MGP_BALBcJ_P0066265 Klhl9 protein_coding protein_coding MGP_BALBcJ_T0007887.1 MGP_BALBcJ_G0006447.1 mouse_genomes_project 4 100376474 100487069 + Gm12718 lincRNA lincRNA MGP_BALBcJ_T0007888.1 MGP_BALBcJ_G0006447.1 mouse_genomes_project 4 100376495 100487051 + Gm12718 lincRNA lincRNA MGP_BALBcJ_T0065417.1 MGP_BALBcJ_G0028202.1 mouse_genomes_project 4 40553236 40554733 - MGP_BALBcJ_P0065417 Olfr156 protein_coding protein_coding MGP_BALBcJ_T0067881.1 MGP_BALBcJ_G0028786.1 mouse_genomes_project 4 125858367 125861544 - MGP_BALBcJ_P0067881 Tlr12 protein_coding protein_coding MGP_BALBcJ_T0067882.1 MGP_BALBcJ_G0028786.1 mouse_genomes_project 4 125860426 125861517 - Tlr12 protein_coding processed_transcript MGP_BALBcJ_T0064750.1 MGP_BALBcJ_G0028049.1 mouse_genomes_project 4 16052269 16103891 - MGP_BALBcJ_P0064750 Cpne3 protein_coding protein_coding MGP_BALBcJ_T0064751.1 MGP_BALBcJ_G0028049.1 mouse_genomes_project 4 16073719 16076778 - Cpne3 protein_coding processed_transcript MGP_BALBcJ_T0064752.1 MGP_BALBcJ_G0028049.1 mouse_genomes_project 4 16083740 16103866 - Cpne3 protein_coding retained_intron MGP_BALBcJ_T0068485.1 MGP_BALBcJ_G0028907.1 mouse_genomes_project 4 131586271 131596029 + MGP_BALBcJ_P0068485 Slc30a2 protein_coding protein_coding MGP_BALBcJ_T0068486.1 MGP_BALBcJ_G0028907.1 mouse_genomes_project 4 131586376 131595889 + MGP_BALBcJ_P0068486 Slc30a2 protein_coding protein_coding MGP_BALBcJ_T0067719.1 MGP_BALBcJ_G0028747.1 mouse_genomes_project 4 122313180 122322597 - MGP_BALBcJ_P0067719 Zc3h12a protein_coding protein_coding MGP_BALBcJ_T0067720.1 MGP_BALBcJ_G0028747.1 mouse_genomes_project 4 122314850 122317277 - Zc3h12a protein_coding retained_intron MGP_BALBcJ_T0004447.1 MGP_BALBcJ_G0003875.1 mouse_genomes_project 4 69110553 69111235 + Gm11250 antisense antisense MGP_BALBcJ_T0014696.1 MGP_BALBcJ_G0012793.1 mouse_genomes_project 4 112226028 112229111 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017986.1 MGP_BALBcJ_G0015471.1 mouse_genomes_project 4 6220457 6272184 + 4930412C18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017987.1 MGP_BALBcJ_G0015471.1 mouse_genomes_project 4 6220457 6273645 + 4930412C18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017988.1 MGP_BALBcJ_G0015471.1 mouse_genomes_project 4 6220523 6226818 + 4930412C18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017989.1 MGP_BALBcJ_G0015471.1 mouse_genomes_project 4 6220551 6230579 + 4930412C18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017990.1 MGP_BALBcJ_G0015471.1 mouse_genomes_project 4 6220669 6270519 + 4930412C18Rik processed_transcript processed_transcript MGP_BALBcJ_T0014795.1 MGP_BALBcJ_G0012892.1 mouse_genomes_project 4 142240028 142240577 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101159.1 MGP_BALBcJ_G0039195.1 mouse_genomes_project 4 115224685 115224789 + Gm23382 snoRNA snoRNA MGP_BALBcJ_T0014580.1 MGP_BALBcJ_G0012677.1 mouse_genomes_project 4 70443607 70444470 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068711.1 MGP_BALBcJ_G0028966.1 mouse_genomes_project 4 134829408 134930799 + MGP_BALBcJ_P0068711 Hspg2 protein_coding protein_coding MGP_BALBcJ_T0068712.1 MGP_BALBcJ_G0028966.1 mouse_genomes_project 4 134829442 134930798 + MGP_BALBcJ_P0068712 Hspg2 protein_coding protein_coding MGP_BALBcJ_T0068713.1 MGP_BALBcJ_G0028966.1 mouse_genomes_project 4 134929415 134930369 + Hspg2 protein_coding processed_transcript MGP_BALBcJ_T0014767.1 MGP_BALBcJ_G0012864.1 mouse_genomes_project 4 132646976 132647054 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065729.1 MGP_BALBcJ_G0028279.1 mouse_genomes_project 4 50268411 50378374 + MGP_BALBcJ_P0065729 Slc44a1 protein_coding protein_coding MGP_BALBcJ_T0065730.1 MGP_BALBcJ_G0028279.1 mouse_genomes_project 4 50268411 50445754 + MGP_BALBcJ_P0065730 Slc44a1 protein_coding protein_coding MGP_BALBcJ_T0065731.1 MGP_BALBcJ_G0028279.1 mouse_genomes_project 4 50268669 50356795 + Slc44a1 protein_coding processed_transcript MGP_BALBcJ_T0065732.1 MGP_BALBcJ_G0028279.1 mouse_genomes_project 4 50268682 50395959 + MGP_BALBcJ_P0065732 Slc44a1 protein_coding protein_coding MGP_BALBcJ_T0065733.1 MGP_BALBcJ_G0028279.1 mouse_genomes_project 4 50268682 50391601 + MGP_BALBcJ_P0065733 Slc44a1 protein_coding protein_coding MGP_BALBcJ_T0065734.1 MGP_BALBcJ_G0028279.1 mouse_genomes_project 4 50424255 50445263 + Slc44a1 protein_coding processed_transcript MGP_BALBcJ_T0066843.1 MGP_BALBcJ_G0028541.1 mouse_genomes_project 4 105656753 105794581 - MGP_BALBcJ_P0066843 protein_coding protein_coding MGP_BALBcJ_T0066844.1 MGP_BALBcJ_G0028541.1 mouse_genomes_project 4 105656754 105794296 - MGP_BALBcJ_P0066844 protein_coding protein_coding MGP_BALBcJ_T0066845.1 MGP_BALBcJ_G0028541.1 mouse_genomes_project 4 105658543 105737411 - MGP_BALBcJ_P0066845 protein_coding protein_coding MGP_BALBcJ_T0098594.1 MGP_BALBcJ_G0036648.1 mouse_genomes_project 4 9316898 9317005 + n-R5s182 rRNA rRNA MGP_BALBcJ_T0001426.1 MGP_BALBcJ_G0001347.1 mouse_genomes_project 4 142709417 142711111 - TEC TEC MGP_BALBcJ_T0102513.1 MGP_BALBcJ_G0040329.1 mouse_genomes_project 4 70334300 70364502 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014438.1 MGP_BALBcJ_G0012535.1 mouse_genomes_project 4 20169517 20169934 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007778.1 MGP_BALBcJ_G0006353.1 mouse_genomes_project 4 8470371 8479941 - Gm11840 lincRNA lincRNA MGP_BALBcJ_T0066596.1 MGP_BALBcJ_G0028495.1 mouse_genomes_project 4 101909047 102016463 + MGP_BALBcJ_P0066596 1700024P16Rik protein_coding protein_coding MGP_BALBcJ_T0066597.1 MGP_BALBcJ_G0028495.1 mouse_genomes_project 4 101909115 102016463 + MGP_BALBcJ_P0066597 1700024P16Rik protein_coding protein_coding MGP_BALBcJ_T0014759.1 MGP_BALBcJ_G0012856.1 mouse_genomes_project 4 130071340 130073204 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004401.1 MGP_BALBcJ_G0003837.1 mouse_genomes_project 4 3180519 3197119 + Gm11802 antisense antisense MGP_BALBcJ_T0007997.1 MGP_BALBcJ_G0006525.1 mouse_genomes_project 4 147740301 147747371 + Gm16188 lincRNA lincRNA MGP_BALBcJ_T0014521.1 MGP_BALBcJ_G0012618.1 mouse_genomes_project 4 46557523 46558039 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101097.1 MGP_BALBcJ_G0039133.1 mouse_genomes_project 4 1244905 1245037 + Gm26436 snoRNA snoRNA MGP_BALBcJ_T0004548.1 MGP_BALBcJ_G0003950.1 mouse_genomes_project 4 137561949 137563710 + Gm13029 antisense antisense MGP_BALBcJ_T0007985.1 MGP_BALBcJ_G0006513.1 mouse_genomes_project 4 137820883 137826407 + Gm13017 lincRNA lincRNA MGP_BALBcJ_T0101119.1 MGP_BALBcJ_G0039155.1 mouse_genomes_project 4 44708474 44708617 + Gm22670 snoRNA snoRNA MGP_BALBcJ_T0007763.1 MGP_BALBcJ_G0006343.1 mouse_genomes_project 4 115391 125933 + 2210414B05Rik lincRNA lincRNA MGP_BALBcJ_T0099884.1 MGP_BALBcJ_G0037920.1 mouse_genomes_project 4 132857258 132857359 + Gm23106 snRNA snRNA MGP_BALBcJ_T0004427.1 MGP_BALBcJ_G0003857.1 mouse_genomes_project 4 40320214 40340851 + Gm12472 antisense antisense MGP_BALBcJ_T0014443.1 MGP_BALBcJ_G0012540.1 mouse_genomes_project 4 21922544 21922871 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014412.1 MGP_BALBcJ_G0012509.1 mouse_genomes_project 4 12866990 12868051 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014709.1 MGP_BALBcJ_G0012806.1 mouse_genomes_project 4 114765086 114765653 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014718.1 MGP_BALBcJ_G0012815.1 mouse_genomes_project 4 116602511 116602925 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007977.1 MGP_BALBcJ_G0006506.1 mouse_genomes_project 4 134710988 134712105 - 2810405F17Rik lincRNA lincRNA MGP_BALBcJ_T0066273.1 MGP_BALBcJ_G0028419.1 mouse_genomes_project 4 85889812 85890310 - MGP_BALBcJ_P0066273 4930553M12Rik protein_coding protein_coding MGP_BALBcJ_T0004443.1 MGP_BALBcJ_G0003871.1 mouse_genomes_project 4 56733791 56738728 - Gm12542 antisense antisense MGP_BALBcJ_T0014712.1 MGP_BALBcJ_G0012809.1 mouse_genomes_project 4 115554299 115554726 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067515.1 MGP_BALBcJ_G0028690.1 mouse_genomes_project 4 117347429 117367708 - MGP_BALBcJ_P0067515 Foxo6 protein_coding protein_coding MGP_BALBcJ_T0014600.1 MGP_BALBcJ_G0012697.1 mouse_genomes_project 4 76854564 76854967 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014808.1 MGP_BALBcJ_G0012905.1 mouse_genomes_project 4 147757305 147757446 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067417.1 MGP_BALBcJ_G0028670.1 mouse_genomes_project 4 116177355 116207483 + MGP_BALBcJ_P0067417 Slc2a1 protein_coding protein_coding MGP_BALBcJ_T0067418.1 MGP_BALBcJ_G0028670.1 mouse_genomes_project 4 116177448 116202090 + MGP_BALBcJ_P0067418 Slc2a1 protein_coding protein_coding MGP_BALBcJ_T0067419.1 MGP_BALBcJ_G0028670.1 mouse_genomes_project 4 116177503 116202062 + MGP_BALBcJ_P0067419 Slc2a1 protein_coding protein_coding MGP_BALBcJ_T0067420.1 MGP_BALBcJ_G0028670.1 mouse_genomes_project 4 116177558 116206825 + MGP_BALBcJ_P0067420 Slc2a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018070.1 MGP_BALBcJ_G0015519.1 mouse_genomes_project 4 131248424 131252280 + processed_transcript processed_transcript MGP_BALBcJ_T0014433.1 MGP_BALBcJ_G0012530.1 mouse_genomes_project 4 18810729 18811235 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066013.1 MGP_BALBcJ_G0028359.1 mouse_genomes_project 4 62595915 62607199 + MGP_BALBcJ_P0066013 Trim32 protein_coding protein_coding MGP_BALBcJ_T0066014.1 MGP_BALBcJ_G0028359.1 mouse_genomes_project 4 62595915 62607199 + MGP_BALBcJ_P0066014 Trim32 protein_coding protein_coding MGP_BALBcJ_T0066015.1 MGP_BALBcJ_G0028359.1 mouse_genomes_project 4 62596178 62604577 + MGP_BALBcJ_P0066015 Trim32 protein_coding protein_coding MGP_BALBcJ_T0066016.1 MGP_BALBcJ_G0028359.1 mouse_genomes_project 4 62596178 62604717 + MGP_BALBcJ_P0066016 Trim32 protein_coding protein_coding MGP_BALBcJ_T0068597.1 MGP_BALBcJ_G0028934.1 mouse_genomes_project 4 133152529 133155462 - MGP_BALBcJ_P0068597 Pnrc2 protein_coding protein_coding MGP_BALBcJ_T0068598.1 MGP_BALBcJ_G0028934.1 mouse_genomes_project 4 133153935 133155182 - MGP_BALBcJ_P0068598 Pnrc2 protein_coding protein_coding MGP_BALBcJ_T0068599.1 MGP_BALBcJ_G0028934.1 mouse_genomes_project 4 133154062 133154673 - MGP_BALBcJ_P0068599 Pnrc2 protein_coding protein_coding MGP_BALBcJ_T0066042.1 MGP_BALBcJ_G0028366.1 mouse_genomes_project 4 69777873 69779925 - MGP_BALBcJ_P0066042 Aldoart1 protein_coding protein_coding MGP_BALBcJ_T0066043.1 MGP_BALBcJ_G0028366.1 mouse_genomes_project 4 69777873 69779923 - MGP_BALBcJ_P0066043 Aldoart1 protein_coding protein_coding MGP_BALBcJ_T0018020.1 MGP_BALBcJ_G0015490.1 mouse_genomes_project 4 70744373 70751447 + Gm11240 processed_transcript processed_transcript MGP_BALBcJ_T0014491.1 MGP_BALBcJ_G0012588.1 mouse_genomes_project 4 34775842 34776271 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014384.1 MGP_BALBcJ_G0012481.1 mouse_genomes_project 4 6407841 6408504 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014480.1 MGP_BALBcJ_G0012577.1 mouse_genomes_project 4 31088884 31089338 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004425.1 MGP_BALBcJ_G0003856.1 mouse_genomes_project 4 40233765 40238068 - Gm12454 antisense antisense MGP_BALBcJ_T0004426.1 MGP_BALBcJ_G0003856.1 mouse_genomes_project 4 40234994 40238091 - Gm12454 antisense antisense MGP_BALBcJ_T0065789.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53790651 53943815 - MGP_BALBcJ_P0065789 protein_coding protein_coding MGP_BALBcJ_T0065790.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53794353 53826803 - MGP_BALBcJ_P0065790 protein_coding protein_coding MGP_BALBcJ_T0065791.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53860731 53943815 - MGP_BALBcJ_P0065791 protein_coding protein_coding MGP_BALBcJ_T0065792.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53862037 53869572 - protein_coding processed_transcript MGP_BALBcJ_T0065793.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53872317 53902349 - protein_coding processed_transcript MGP_BALBcJ_T0065794.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53877835 53938763 - protein_coding processed_transcript MGP_BALBcJ_T0065795.1 MGP_BALBcJ_G0028295.1 mouse_genomes_project 4 53886917 53919655 - protein_coding processed_transcript MGP_BALBcJ_T0099827.1 MGP_BALBcJ_G0037863.1 mouse_genomes_project 4 38091591 38091699 - Gm26049 snRNA snRNA MGP_BALBcJ_T0064993.1 MGP_BALBcJ_G0028110.1 mouse_genomes_project 4 36886629 36943888 + MGP_BALBcJ_P0064993 Aco1 protein_coding protein_coding MGP_BALBcJ_T0064994.1 MGP_BALBcJ_G0028110.1 mouse_genomes_project 4 36908520 36914569 + Aco1 protein_coding processed_transcript MGP_BALBcJ_T0064995.1 MGP_BALBcJ_G0028110.1 mouse_genomes_project 4 36912085 36921129 + Aco1 protein_coding processed_transcript MGP_BALBcJ_T0064996.1 MGP_BALBcJ_G0028110.1 mouse_genomes_project 4 36935793 36941954 + Aco1 protein_coding processed_transcript MGP_BALBcJ_T0067438.1 MGP_BALBcJ_G0028675.1 mouse_genomes_project 4 116274305 116288523 - MGP_BALBcJ_P0067438 4930538K18Rik protein_coding protein_coding MGP_BALBcJ_T0066311.1 MGP_BALBcJ_G0028433.1 mouse_genomes_project 4 91626053 91639757 - MGP_BALBcJ_P0066311 Lrrc19 protein_coding protein_coding MGP_BALBcJ_T0066312.1 MGP_BALBcJ_G0028433.1 mouse_genomes_project 4 91626053 91639785 - MGP_BALBcJ_P0066312 Lrrc19 protein_coding protein_coding MGP_BALBcJ_T0101101.1 MGP_BALBcJ_G0039137.1 mouse_genomes_project 4 10543259 10543498 - Gm24068 snoRNA snoRNA MGP_BALBcJ_T0066527.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99739963 99868743 + Sgip1 protein_coding retained_intron MGP_BALBcJ_T0066528.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753263 99966723 + MGP_BALBcJ_P0066528 Sgip1 protein_coding protein_coding MGP_BALBcJ_T0066529.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753456 99861639 + Sgip1 protein_coding processed_transcript MGP_BALBcJ_T0066530.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753473 99966604 + MGP_BALBcJ_P0066530 Sgip1 protein_coding protein_coding MGP_BALBcJ_T0066531.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753480 99867726 + MGP_BALBcJ_P0066531 Sgip1 protein_coding protein_coding MGP_BALBcJ_T0066532.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753483 99859076 + Sgip1 protein_coding processed_transcript MGP_BALBcJ_T0066533.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753491 99965918 + MGP_BALBcJ_P0066533 Sgip1 protein_coding protein_coding MGP_BALBcJ_T0066534.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753503 99868039 + Sgip1 protein_coding processed_transcript MGP_BALBcJ_T0066535.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753593 99913858 + MGP_BALBcJ_P0066535 Sgip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066536.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99753653 99968360 + MGP_BALBcJ_P0066536 Sgip1 protein_coding protein_coding MGP_BALBcJ_T0066537.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99868480 99965344 + MGP_BALBcJ_P0066537 Sgip1 protein_coding protein_coding MGP_BALBcJ_T0066538.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99916033 99923492 + Sgip1 protein_coding processed_transcript MGP_BALBcJ_T0066539.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99921942 99923665 + Sgip1 protein_coding processed_transcript MGP_BALBcJ_T0066540.1 MGP_BALBcJ_G0028483.1 mouse_genomes_project 4 99957384 99962935 + Sgip1 protein_coding processed_transcript MGP_BALBcJ_T0014678.1 MGP_BALBcJ_G0012775.1 mouse_genomes_project 4 104332079 104333095 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064617.1 MGP_BALBcJ_G0028014.1 mouse_genomes_project 4 7306065 7334333 + MGP_BALBcJ_P0064617 2610301B20Rik protein_coding protein_coding MGP_BALBcJ_T0064618.1 MGP_BALBcJ_G0028014.1 mouse_genomes_project 4 7306092 7328388 + 2610301B20Rik protein_coding processed_transcript MGP_BALBcJ_T0064619.1 MGP_BALBcJ_G0028014.1 mouse_genomes_project 4 7306132 7332992 + 2610301B20Rik protein_coding processed_transcript MGP_BALBcJ_T0064620.1 MGP_BALBcJ_G0028014.1 mouse_genomes_project 4 7306135 7334337 + MGP_BALBcJ_P0064620 2610301B20Rik protein_coding protein_coding MGP_BALBcJ_T0064621.1 MGP_BALBcJ_G0028014.1 mouse_genomes_project 4 7311122 7326612 + 2610301B20Rik protein_coding processed_transcript MGP_BALBcJ_T0065418.1 MGP_BALBcJ_G0028203.1 mouse_genomes_project 4 40568737 40570753 - MGP_BALBcJ_P0065418 Olfr157 protein_coding protein_coding MGP_BALBcJ_T0065415.1 MGP_BALBcJ_G0028200.1 mouse_genomes_project 4 40461593 40463045 + MGP_BALBcJ_P0065415 Hrct1 protein_coding protein_coding MGP_BALBcJ_T0007957.1 MGP_BALBcJ_G0006495.1 mouse_genomes_project 4 129435767 129435925 + Gm28872 lincRNA lincRNA MGP_BALBcJ_T0065880.1 MGP_BALBcJ_G0028317.1 mouse_genomes_project 4 56415746 56453778 + MGP_BALBcJ_P0065880 Hsdl2 protein_coding protein_coding MGP_BALBcJ_T0065881.1 MGP_BALBcJ_G0028317.1 mouse_genomes_project 4 56415828 56453777 + MGP_BALBcJ_P0065881 Hsdl2 protein_coding protein_coding MGP_BALBcJ_T0065882.1 MGP_BALBcJ_G0028317.1 mouse_genomes_project 4 56428826 56435967 + MGP_BALBcJ_P0065882 Hsdl2 protein_coding protein_coding MGP_BALBcJ_T0014506.1 MGP_BALBcJ_G0012603.1 mouse_genomes_project 4 41064094 41064726 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068548.1 MGP_BALBcJ_G0028923.1 mouse_genomes_project 4 132477959 132537549 - MGP_BALBcJ_P0068548 Clic4 protein_coding protein_coding MGP_BALBcJ_T0068549.1 MGP_BALBcJ_G0028923.1 mouse_genomes_project 4 132487201 132537549 - Clic4 protein_coding retained_intron MGP_BALBcJ_T0010621.1 MGP_BALBcJ_G0008746.1 mouse_genomes_project 4 133916770 133916829 - Gm22180 miRNA miRNA MGP_BALBcJ_T0099832.1 MGP_BALBcJ_G0037868.1 mouse_genomes_project 4 46088767 46088873 + Gm22685 snRNA snRNA MGP_BALBcJ_T0066118.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79852704 80007165 - MGP_BALBcJ_P0066118 Frem1 protein_coding protein_coding MGP_BALBcJ_T0066119.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79852711 79975868 - MGP_BALBcJ_P0066119 Frem1 protein_coding protein_coding MGP_BALBcJ_T0066120.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79852711 80007337 - MGP_BALBcJ_P0066120 Frem1 protein_coding protein_coding MGP_BALBcJ_T0066121.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79855348 79871937 - Frem1 protein_coding processed_transcript MGP_BALBcJ_T0066122.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79873135 79882292 - Frem1 protein_coding retained_intron MGP_BALBcJ_T0066123.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79892551 79897329 - Frem1 protein_coding retained_intron MGP_BALBcJ_T0066124.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79894872 79927488 - MGP_BALBcJ_P0066124 Frem1 protein_coding protein_coding MGP_BALBcJ_T0066125.1 MGP_BALBcJ_G0028382.1 mouse_genomes_project 4 79947649 80007337 - Frem1 protein_coding processed_transcript MGP_BALBcJ_T0102529.1 MGP_BALBcJ_G0040345.1 mouse_genomes_project 4 111073626 111074636 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004411.1 MGP_BALBcJ_G0003844.1 mouse_genomes_project 4 11497445 11507929 + Gm11844 antisense antisense MGP_BALBcJ_T0014705.1 MGP_BALBcJ_G0012802.1 mouse_genomes_project 4 113908349 113909225 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065670.1 MGP_BALBcJ_G0028256.1 mouse_genomes_project 4 45459389 45469295 + MGP_BALBcJ_P0065670 Murc protein_coding protein_coding MGP_BALBcJ_T0014515.1 MGP_BALBcJ_G0012612.1 mouse_genomes_project 4 43820413 43820776 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067860.1 MGP_BALBcJ_G0028777.1 mouse_genomes_project 4 124466656 124470674 + MGP_BALBcJ_P0067860 Smim12 protein_coding protein_coding MGP_BALBcJ_T0064847.1 MGP_BALBcJ_G0028074.1 mouse_genomes_project 4 22846387 22868778 - MGP_BALBcJ_P0064847 Manea protein_coding protein_coding MGP_BALBcJ_T0064848.1 MGP_BALBcJ_G0028074.1 mouse_genomes_project 4 22849930 22862760 - Manea protein_coding processed_transcript MGP_BALBcJ_T0064849.1 MGP_BALBcJ_G0028074.1 mouse_genomes_project 4 22862324 22868741 - Manea protein_coding processed_transcript MGP_BALBcJ_T0064850.1 MGP_BALBcJ_G0028074.1 mouse_genomes_project 4 22862615 22868778 - MGP_BALBcJ_P0064850 Manea protein_coding protein_coding MGP_BALBcJ_T0018076.1 MGP_BALBcJ_G0015525.1 mouse_genomes_project 4 153485413 153509477 - 5830444B04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018077.1 MGP_BALBcJ_G0015525.1 mouse_genomes_project 4 153495566 153502422 - 5830444B04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018078.1 MGP_BALBcJ_G0015525.1 mouse_genomes_project 4 153495567 153509468 - 5830444B04Rik processed_transcript processed_transcript MGP_BALBcJ_T0018079.1 MGP_BALBcJ_G0015525.1 mouse_genomes_project 4 153496775 153502401 - 5830444B04Rik processed_transcript processed_transcript MGP_BALBcJ_T0014752.1 MGP_BALBcJ_G0012849.1 mouse_genomes_project 4 124636733 124637153 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065632.1 MGP_BALBcJ_G0028247.1 mouse_genomes_project 4 44246142 44251846 - Alg2 protein_coding processed_transcript MGP_BALBcJ_T0065633.1 MGP_BALBcJ_G0028247.1 mouse_genomes_project 4 44250908 44255721 - MGP_BALBcJ_P0065633 Alg2 protein_coding protein_coding MGP_BALBcJ_T0065634.1 MGP_BALBcJ_G0028247.1 mouse_genomes_project 4 44252969 44255365 - MGP_BALBcJ_P0065634 Alg2 protein_coding protein_coding MGP_BALBcJ_T0066920.1 MGP_BALBcJ_G0028556.1 mouse_genomes_project 4 106689952 106982183 + MGP_BALBcJ_P0066920 Faf1 protein_coding protein_coding MGP_BALBcJ_T0066921.1 MGP_BALBcJ_G0028556.1 mouse_genomes_project 4 106690361 106696807 + Faf1 protein_coding processed_transcript MGP_BALBcJ_T0066922.1 MGP_BALBcJ_G0028556.1 mouse_genomes_project 4 106857413 106942964 + Faf1 protein_coding processed_transcript MGP_BALBcJ_T0068210.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129383278 129417018 - MGP_BALBcJ_P0068210 Gmeb1 protein_coding protein_coding MGP_BALBcJ_T0068211.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129386500 129426889 - MGP_BALBcJ_P0068211 Gmeb1 protein_coding protein_coding MGP_BALBcJ_T0068212.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129388573 129416376 - MGP_BALBcJ_P0068212 Gmeb1 protein_coding protein_coding MGP_BALBcJ_T0068213.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129389225 129426970 - MGP_BALBcJ_P0068213 Gmeb1 protein_coding protein_coding MGP_BALBcJ_T0068214.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129395083 129398672 - Gmeb1 protein_coding retained_intron MGP_BALBcJ_T0068215.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129400458 129410050 - Gmeb1 protein_coding retained_intron MGP_BALBcJ_T0068216.1 MGP_BALBcJ_G0028847.1 mouse_genomes_project 4 129416287 129418776 - Gmeb1 protein_coding processed_transcript MGP_BALBcJ_T0018034.1 MGP_BALBcJ_G0015501.1 mouse_genomes_project 4 94732182 94735377 - Gm12676 processed_transcript processed_transcript MGP_BALBcJ_T0066905.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106428229 106449612 + MGP_BALBcJ_P0066905 Ttc39a protein_coding protein_coding MGP_BALBcJ_T0066906.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106428693 106466065 + MGP_BALBcJ_P0066906 Ttc39a protein_coding protein_coding MGP_BALBcJ_T0066907.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106428716 106445716 + MGP_BALBcJ_P0066907 Ttc39a protein_coding protein_coding MGP_BALBcJ_T0066908.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106428735 106444420 + Ttc39a protein_coding processed_transcript MGP_BALBcJ_T0066909.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106436387 106449680 + MGP_BALBcJ_P0066909 Ttc39a protein_coding protein_coding MGP_BALBcJ_T0066910.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106437259 106465702 + MGP_BALBcJ_P0066910 Ttc39a protein_coding protein_coding MGP_BALBcJ_T0066911.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106437385 106442855 + Ttc39a protein_coding processed_transcript MGP_BALBcJ_T0066912.1 MGP_BALBcJ_G0028552.1 mouse_genomes_project 4 106442419 106447843 + MGP_BALBcJ_P0066912 Ttc39a protein_coding protein_coding MGP_BALBcJ_T0014535.1 MGP_BALBcJ_G0012632.1 mouse_genomes_project 4 50485931 50486980 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066853.1 MGP_BALBcJ_G0028546.1 mouse_genomes_project 4 105864090 105865719 + MGP_BALBcJ_P0066853 Kti12 protein_coding protein_coding MGP_BALBcJ_T0014428.1 MGP_BALBcJ_G0012525.1 mouse_genomes_project 4 17531794 17532855 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001423.1 MGP_BALBcJ_G0001345.1 mouse_genomes_project 4 138695906 138697181 - TEC TEC MGP_BALBcJ_T0001424.1 MGP_BALBcJ_G0001345.1 mouse_genomes_project 4 138695912 138697181 - TEC TEC MGP_BALBcJ_T0069845.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153939445 153951359 + MGP_BALBcJ_P0069845 Dvl1 protein_coding protein_coding MGP_BALBcJ_T0069846.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153939504 153950934 + MGP_BALBcJ_P0069846 Dvl1 protein_coding protein_coding MGP_BALBcJ_T0069847.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153939509 153951358 + Dvl1 protein_coding retained_intron MGP_BALBcJ_T0069848.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153939609 153951359 + Dvl1 protein_coding retained_intron MGP_BALBcJ_T0069849.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153939629 153951359 + Dvl1 protein_coding retained_intron MGP_BALBcJ_T0069850.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153939714 153951359 + Dvl1 protein_coding retained_intron MGP_BALBcJ_T0069851.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153945467 153946009 + Dvl1 protein_coding processed_transcript MGP_BALBcJ_T0069852.1 MGP_BALBcJ_G0029214.1 mouse_genomes_project 4 153946628 153948288 + Dvl1 protein_coding retained_intron MGP_BALBcJ_T0004420.1 MGP_BALBcJ_G0003851.1 mouse_genomes_project 4 36169617 36220267 - Gm17094 antisense antisense MGP_BALBcJ_T0066918.1 MGP_BALBcJ_G0028555.1 mouse_genomes_project 4 106673409 106677883 - MGP_BALBcJ_P0066918 Cdkn2c protein_coding protein_coding MGP_BALBcJ_T0066919.1 MGP_BALBcJ_G0028555.1 mouse_genomes_project 4 106673409 106679700 - MGP_BALBcJ_P0066919 Cdkn2c protein_coding protein_coding MGP_BALBcJ_T0067027.1 MGP_BALBcJ_G0028581.1 mouse_genomes_project 4 112392367 112419315 + MGP_BALBcJ_P0067027 protein_coding protein_coding MGP_BALBcJ_T0010615.1 MGP_BALBcJ_G0008740.1 mouse_genomes_project 4 130767647 130767773 - Gm23158 miRNA miRNA MGP_BALBcJ_T0067910.1 MGP_BALBcJ_G0028792.1 mouse_genomes_project 4 126247330 126257630 + Ak2 protein_coding processed_transcript MGP_BALBcJ_T0067911.1 MGP_BALBcJ_G0028792.1 mouse_genomes_project 4 126248596 126266886 + MGP_BALBcJ_P0067911 Ak2 protein_coding protein_coding MGP_BALBcJ_T0067912.1 MGP_BALBcJ_G0028792.1 mouse_genomes_project 4 126248596 126263770 + MGP_BALBcJ_P0067912 Ak2 protein_coding protein_coding MGP_BALBcJ_T0067913.1 MGP_BALBcJ_G0028792.1 mouse_genomes_project 4 126248725 126263598 + MGP_BALBcJ_P0067913 Ak2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066282.1 MGP_BALBcJ_G0028425.1 mouse_genomes_project 4 87226989 87233853 + MGP_BALBcJ_P0066282 Zfp352 protein_coding protein_coding MGP_BALBcJ_T0066283.1 MGP_BALBcJ_G0028425.1 mouse_genomes_project 4 87231764 87233420 + MGP_BALBcJ_P0066283 Zfp352 protein_coding protein_coding MGP_BALBcJ_T0001427.1 MGP_BALBcJ_G0001348.1 mouse_genomes_project 4 148044777 148047443 + TEC TEC MGP_BALBcJ_T0007768.1 MGP_BALBcJ_G0006347.1 mouse_genomes_project 4 4088115 4101223 + 8430436N08Rik lincRNA lincRNA MGP_BALBcJ_T0069082.1 MGP_BALBcJ_G0029050.1 mouse_genomes_project 4 140766289 140802259 - MGP_BALBcJ_P0069082 Pdpn protein_coding protein_coding MGP_BALBcJ_T0069083.1 MGP_BALBcJ_G0029050.1 mouse_genomes_project 4 140767204 140802158 - MGP_BALBcJ_P0069083 Pdpn protein_coding protein_coding MGP_BALBcJ_T0008001.1 MGP_BALBcJ_G0006529.1 mouse_genomes_project 4 148657012 148668613 - Gm16079 lincRNA lincRNA MGP_BALBcJ_T0068901.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138099206 - MGP_BALBcJ_P0068901 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068902.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138081767 - MGP_BALBcJ_P0068902 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068903.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138012384 - MGP_BALBcJ_P0068903 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068904.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138014912 - MGP_BALBcJ_P0068904 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068905.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138081773 - MGP_BALBcJ_P0068905 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068906.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138081767 - MGP_BALBcJ_P0068906 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068907.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137943962 138007665 - MGP_BALBcJ_P0068907 Arhgef10l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068908.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 137974382 137998127 - MGP_BALBcJ_P0068908 Arhgef10l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068909.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 138006027 138012368 - MGP_BALBcJ_P0068909 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068910.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 138011431 138022753 - Arhgef10l protein_coding retained_intron MGP_BALBcJ_T0068911.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 138022644 138082377 - MGP_BALBcJ_P0068911 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068912.1 MGP_BALBcJ_G0029009.1 mouse_genomes_project 4 138023897 138048854 - MGP_BALBcJ_P0068912 Arhgef10l protein_coding protein_coding MGP_BALBcJ_T0068648.1 MGP_BALBcJ_G0028946.1 mouse_genomes_project 4 133543433 133566867 + Tcea3 protein_coding processed_transcript MGP_BALBcJ_T0068649.1 MGP_BALBcJ_G0028946.1 mouse_genomes_project 4 133543656 133570533 + MGP_BALBcJ_P0068649 Tcea3 protein_coding protein_coding MGP_BALBcJ_T0068650.1 MGP_BALBcJ_G0028946.1 mouse_genomes_project 4 133543677 133559997 + MGP_BALBcJ_P0068650 Tcea3 protein_coding protein_coding MGP_BALBcJ_T0010594.1 MGP_BALBcJ_G0008719.1 mouse_genomes_project 4 106031705 106031781 + Mir761 miRNA miRNA MGP_BALBcJ_T0069122.1 MGP_BALBcJ_G0029073.1 mouse_genomes_project 4 142154777 142179161 - MGP_BALBcJ_P0069122 1700012P22Rik protein_coding protein_coding MGP_BALBcJ_T0068976.1 MGP_BALBcJ_G0029024.1 mouse_genomes_project 4 138671888 138678081 + MGP_BALBcJ_P0068976 Rsg1 protein_coding protein_coding MGP_BALBcJ_T0068977.1 MGP_BALBcJ_G0029024.1 mouse_genomes_project 4 138672377 138676607 + Rsg1 protein_coding processed_transcript MGP_BALBcJ_T0068978.1 MGP_BALBcJ_G0029024.1 mouse_genomes_project 4 138676578 138684660 + Rsg1 protein_coding processed_transcript MGP_BALBcJ_T0066511.1 MGP_BALBcJ_G0028481.1 mouse_genomes_project 4 98949686 98953114 + MGP_BALBcJ_P0066511 Gm12789 protein_coding protein_coding MGP_BALBcJ_T0066512.1 MGP_BALBcJ_G0028481.1 mouse_genomes_project 4 98949920 98952145 + Gm12789 protein_coding processed_transcript MGP_BALBcJ_T0066513.1 MGP_BALBcJ_G0028481.1 mouse_genomes_project 4 98951176 98953075 + MGP_BALBcJ_P0066513 Gm12789 protein_coding protein_coding MGP_BALBcJ_T0014794.1 MGP_BALBcJ_G0012891.1 mouse_genomes_project 4 141620457 141621718 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069871.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153984151 153998822 + MGP_BALBcJ_P0069871 Acap3 protein_coding protein_coding MGP_BALBcJ_T0069872.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153984204 153998823 + MGP_BALBcJ_P0069872 Acap3 protein_coding protein_coding MGP_BALBcJ_T0069873.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153984231 153991052 + Acap3 protein_coding processed_transcript MGP_BALBcJ_T0069874.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153984601 153991194 + Acap3 protein_coding processed_transcript MGP_BALBcJ_T0069875.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153984641 153998823 + Acap3 protein_coding processed_transcript MGP_BALBcJ_T0069876.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153993167 153994270 + Acap3 protein_coding retained_intron MGP_BALBcJ_T0069877.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153994158 153996677 + Acap3 protein_coding retained_intron MGP_BALBcJ_T0069878.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153994820 153996908 + Acap3 protein_coding processed_transcript MGP_BALBcJ_T0069879.1 MGP_BALBcJ_G0029219.1 mouse_genomes_project 4 153996925 153997484 + Acap3 protein_coding processed_transcript MGP_BALBcJ_T0014695.1 MGP_BALBcJ_G0012792.1 mouse_genomes_project 4 108791332 108792323 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014590.1 MGP_BALBcJ_G0012687.1 mouse_genomes_project 4 72761837 72762666 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014374.1 MGP_BALBcJ_G0012471.1 mouse_genomes_project 4 2576093 2576847 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004529.1 MGP_BALBcJ_G0003934.1 mouse_genomes_project 4 129683813 129689964 - Gm12981 antisense antisense MGP_BALBcJ_T0098763.1 MGP_BALBcJ_G0036817.1 mouse_genomes_project 4 83524877 83525008 - Scarna8 scaRNA scaRNA MGP_BALBcJ_T0099812.1 MGP_BALBcJ_G0037848.1 mouse_genomes_project 4 11865305 11865412 + Gm24317 snRNA snRNA MGP_BALBcJ_T0068818.1 MGP_BALBcJ_G0028986.1 mouse_genomes_project 4 136160126 136166825 + MGP_BALBcJ_P0068818 Pla2g2d protein_coding protein_coding MGP_BALBcJ_T0068819.1 MGP_BALBcJ_G0028986.1 mouse_genomes_project 4 136162284 136165517 + MGP_BALBcJ_P0068819 Pla2g2d protein_coding protein_coding MGP_BALBcJ_T0064915.1 MGP_BALBcJ_G0028091.1 mouse_genomes_project 4 29913886 29916974 - MGP_BALBcJ_P0064915 Pnrc1 protein_coding protein_coding MGP_BALBcJ_T0064916.1 MGP_BALBcJ_G0028091.1 mouse_genomes_project 4 29914467 29916039 - Pnrc1 protein_coding processed_transcript MGP_BALBcJ_T0064917.1 MGP_BALBcJ_G0028091.1 mouse_genomes_project 4 29914475 29960004 - Pnrc1 protein_coding processed_transcript MGP_BALBcJ_T0066180.1 MGP_BALBcJ_G0028389.1 mouse_genomes_project 4 82146519 82339278 + MGP_BALBcJ_P0066180 Sh3gl2 protein_coding protein_coding MGP_BALBcJ_T0066181.1 MGP_BALBcJ_G0028389.1 mouse_genomes_project 4 82146834 82328905 + MGP_BALBcJ_P0066181 Sh3gl2 protein_coding protein_coding MGP_BALBcJ_T0066182.1 MGP_BALBcJ_G0028389.1 mouse_genomes_project 4 82146862 82572391 + MGP_BALBcJ_P0066182 Sh3gl2 protein_coding protein_coding MGP_BALBcJ_T0066183.1 MGP_BALBcJ_G0028389.1 mouse_genomes_project 4 82146928 82316829 + MGP_BALBcJ_P0066183 Sh3gl2 protein_coding protein_coding MGP_BALBcJ_T0066184.1 MGP_BALBcJ_G0028389.1 mouse_genomes_project 4 82315474 82327023 + MGP_BALBcJ_P0066184 Sh3gl2 protein_coding protein_coding MGP_BALBcJ_T0018029.1 MGP_BALBcJ_G0015497.1 mouse_genomes_project 4 91998971 92017383 - Gm12703 processed_transcript processed_transcript MGP_BALBcJ_T0007790.1 MGP_BALBcJ_G0006364.1 mouse_genomes_project 4 20443109 20443576 - Gm28448 lincRNA lincRNA MGP_BALBcJ_T0099824.1 MGP_BALBcJ_G0037860.1 mouse_genomes_project 4 36729818 36729880 - Gm26087 snRNA snRNA MGP_BALBcJ_T0098595.1 MGP_BALBcJ_G0036649.1 mouse_genomes_project 4 38082657 38082772 + n-R5s183 rRNA rRNA MGP_BALBcJ_T0069483.1 MGP_BALBcJ_G0029151.1 mouse_genomes_project 4 150060531 150073497 + Nol9 protein_coding retained_intron MGP_BALBcJ_T0069484.1 MGP_BALBcJ_G0029151.1 mouse_genomes_project 4 150060537 150081786 + MGP_BALBcJ_P0069484 Nol9 protein_coding protein_coding MGP_BALBcJ_T0069485.1 MGP_BALBcJ_G0029151.1 mouse_genomes_project 4 150060546 150077662 + Nol9 protein_coding retained_intron MGP_BALBcJ_T0069486.1 MGP_BALBcJ_G0029151.1 mouse_genomes_project 4 150060546 150083256 + MGP_BALBcJ_P0069486 Nol9 protein_coding protein_coding MGP_BALBcJ_T0069487.1 MGP_BALBcJ_G0029151.1 mouse_genomes_project 4 150060573 150081804 + MGP_BALBcJ_P0069487 Nol9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064911.1 MGP_BALBcJ_G0028089.1 mouse_genomes_project 4 29840122 29855298 - MGP_BALBcJ_P0064911 Pm20d2 protein_coding protein_coding MGP_BALBcJ_T0064912.1 MGP_BALBcJ_G0028089.1 mouse_genomes_project 4 29847490 29855602 - MGP_BALBcJ_P0064912 Pm20d2 protein_coding protein_coding MGP_BALBcJ_T0068146.1 MGP_BALBcJ_G0028836.1 mouse_genomes_project 4 127942608 127976912 + MGP_BALBcJ_P0068146 Sdc3 protein_coding protein_coding MGP_BALBcJ_T0068147.1 MGP_BALBcJ_G0028836.1 mouse_genomes_project 4 127942775 127967866 + Sdc3 protein_coding retained_intron MGP_BALBcJ_T0068148.1 MGP_BALBcJ_G0028836.1 mouse_genomes_project 4 127962524 127969652 + MGP_BALBcJ_P0068148 Sdc3 protein_coding protein_coding MGP_BALBcJ_T0068149.1 MGP_BALBcJ_G0028836.1 mouse_genomes_project 4 127964898 127969652 + MGP_BALBcJ_P0068149 Sdc3 protein_coding protein_coding MGP_BALBcJ_T0068150.1 MGP_BALBcJ_G0028836.1 mouse_genomes_project 4 127967437 127972843 + Sdc3 protein_coding retained_intron MGP_BALBcJ_T0066049.1 MGP_BALBcJ_G0028369.1 mouse_genomes_project 4 70933382 71122045 + MGP_BALBcJ_P0066049 Frmd3 protein_coding protein_coding MGP_BALBcJ_T0066050.1 MGP_BALBcJ_G0028369.1 mouse_genomes_project 4 70933384 71109174 + MGP_BALBcJ_P0066050 Frmd3 protein_coding protein_coding MGP_BALBcJ_T0066051.1 MGP_BALBcJ_G0028369.1 mouse_genomes_project 4 71088028 71108257 + Frmd3 protein_coding processed_transcript MGP_BALBcJ_T0014405.1 MGP_BALBcJ_G0012502.1 mouse_genomes_project 4 12116422 12116746 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069229.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146494871 146518729 + MGP_BALBcJ_P0069229 Exosc10 protein_coding protein_coding MGP_BALBcJ_T0069230.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146494873 146518718 + Exosc10 protein_coding processed_transcript MGP_BALBcJ_T0069231.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146494897 146518721 + MGP_BALBcJ_P0069231 Exosc10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069232.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146494904 146518729 + MGP_BALBcJ_P0069232 Exosc10 protein_coding protein_coding MGP_BALBcJ_T0069233.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146499360 146500452 + MGP_BALBcJ_P0069233 Exosc10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069234.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146502636 146512895 + Exosc10 protein_coding retained_intron MGP_BALBcJ_T0069235.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146504694 146512785 + Exosc10 protein_coding retained_intron MGP_BALBcJ_T0069236.1 MGP_BALBcJ_G0029107.1 mouse_genomes_project 4 146512448 146518649 + Exosc10 protein_coding processed_transcript MGP_BALBcJ_T0068451.1 MGP_BALBcJ_G0028897.1 mouse_genomes_project 4 131425669 131438889 - MGP_BALBcJ_P0068451 Gm7534 protein_coding protein_coding MGP_BALBcJ_T0067983.1 MGP_BALBcJ_G0028806.1 mouse_genomes_project 4 126762823 126764832 - MGP_BALBcJ_P0067983 Tssk3 protein_coding protein_coding MGP_BALBcJ_T0065516.1 MGP_BALBcJ_G0028219.1 mouse_genomes_project 4 41935175 42018317 + MGP_BALBcJ_P0065516 Frmpd1 protein_coding protein_coding MGP_BALBcJ_T0065517.1 MGP_BALBcJ_G0028219.1 mouse_genomes_project 4 41935206 42042375 + MGP_BALBcJ_P0065517 Frmpd1 protein_coding protein_coding MGP_BALBcJ_T0065518.1 MGP_BALBcJ_G0028219.1 mouse_genomes_project 4 41954258 42042375 + MGP_BALBcJ_P0065518 Frmpd1 protein_coding protein_coding MGP_BALBcJ_T0102544.1 MGP_BALBcJ_G0040360.1 mouse_genomes_project 4 119774767 119799809 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066133.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80358862 80399236 + MGP_BALBcJ_P0066133 Snapc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066134.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80358862 80388259 + MGP_BALBcJ_P0066134 Snapc3 protein_coding protein_coding MGP_BALBcJ_T0066135.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80358869 80383438 + MGP_BALBcJ_P0066135 Snapc3 protein_coding protein_coding MGP_BALBcJ_T0066136.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80358882 80388952 + MGP_BALBcJ_P0066136 Snapc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066137.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80358882 80405390 + MGP_BALBcJ_P0066137 Snapc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066138.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80358887 80405861 + MGP_BALBcJ_P0066138 Snapc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066139.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80388724 80405339 + Snapc3 protein_coding processed_transcript MGP_BALBcJ_T0066140.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80388872 80404300 + Snapc3 protein_coding processed_transcript MGP_BALBcJ_T0066147.1 MGP_BALBcJ_G0028384.1 mouse_genomes_project 4 80401365 80405384 + Snapc3 protein_coding retained_intron MGP_BALBcJ_T0014749.1 MGP_BALBcJ_G0012846.1 mouse_genomes_project 4 124275005 124275414 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067236.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114157220 114160345 - Btbd19 protein_coding processed_transcript MGP_BALBcJ_T0067237.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114157884 114160400 - Btbd19 protein_coding processed_transcript MGP_BALBcJ_T0067238.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114158182 114163633 - MGP_BALBcJ_P0067238 Btbd19 protein_coding protein_coding MGP_BALBcJ_T0067239.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114158658 114160374 - Btbd19 protein_coding processed_transcript MGP_BALBcJ_T0067240.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114158713 114159273 - Btbd19 protein_coding retained_intron MGP_BALBcJ_T0067241.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114158736 114159890 - Btbd19 protein_coding retained_intron MGP_BALBcJ_T0067242.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114159320 114163740 - MGP_BALBcJ_P0067242 Btbd19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067243.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114159447 114163673 - MGP_BALBcJ_P0067243 Btbd19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067244.1 MGP_BALBcJ_G0028625.1 mouse_genomes_project 4 114161973 114163186 - Btbd19 protein_coding processed_transcript MGP_BALBcJ_T0014418.1 MGP_BALBcJ_G0012515.1 mouse_genomes_project 4 13737745 13738006 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004534.1 MGP_BALBcJ_G0003938.1 mouse_genomes_project 4 131687170 131688463 - 1700021N21Rik antisense antisense MGP_BALBcJ_T0004453.1 MGP_BALBcJ_G0003881.1 mouse_genomes_project 4 85040510 85042008 + Gm12631 antisense antisense MGP_BALBcJ_T0011560.1 MGP_BALBcJ_G0009685.1 mouse_genomes_project 4 113757394 113757485 + Gm27688 misc_RNA misc_RNA MGP_BALBcJ_T0014483.1 MGP_BALBcJ_G0012580.1 mouse_genomes_project 4 31617616 31619462 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098604.1 MGP_BALBcJ_G0036658.1 mouse_genomes_project 4 121992291 121992410 + n-R5s192 rRNA rRNA MGP_BALBcJ_T0099893.1 MGP_BALBcJ_G0037929.1 mouse_genomes_project 4 146492157 146492265 + Gm23318 snRNA snRNA MGP_BALBcJ_T0004527.1 MGP_BALBcJ_G0003932.1 mouse_genomes_project 4 127962203 127962913 - Gm12970 antisense antisense MGP_BALBcJ_T0067425.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116244803 116259375 - MGP_BALBcJ_P0067425 protein_coding protein_coding MGP_BALBcJ_T0067426.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116244937 116259340 - MGP_BALBcJ_P0067426 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067427.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116246918 116259340 - protein_coding retained_intron MGP_BALBcJ_T0067428.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116247926 116259320 - protein_coding processed_transcript MGP_BALBcJ_T0067429.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116255059 116258111 - MGP_BALBcJ_P0067429 protein_coding protein_coding MGP_BALBcJ_T0067430.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116255120 116259315 - MGP_BALBcJ_P0067430 protein_coding protein_coding MGP_BALBcJ_T0067431.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116256558 116259360 - MGP_BALBcJ_P0067431 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067432.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116256691 116259357 - MGP_BALBcJ_P0067432 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067433.1 MGP_BALBcJ_G0028672.1 mouse_genomes_project 4 116256699 116259375 - MGP_BALBcJ_P0067433 protein_coding protein_coding MGP_BALBcJ_T0067971.1 MGP_BALBcJ_G0028804.1 mouse_genomes_project 4 126694130 126709209 - MGP_BALBcJ_P0067971 Zbtb8b protein_coding protein_coding MGP_BALBcJ_T0067972.1 MGP_BALBcJ_G0028804.1 mouse_genomes_project 4 126694130 126709174 - MGP_BALBcJ_P0067972 Zbtb8b protein_coding protein_coding MGP_BALBcJ_T0067973.1 MGP_BALBcJ_G0028804.1 mouse_genomes_project 4 126694634 126700895 - Zbtb8b protein_coding processed_transcript MGP_BALBcJ_T0067974.1 MGP_BALBcJ_G0028804.1 mouse_genomes_project 4 126697510 126709176 - Zbtb8b protein_coding retained_intron MGP_BALBcJ_T0004517.1 MGP_BALBcJ_G0003925.1 mouse_genomes_project 4 122277451 122279488 - Gm12932 antisense antisense MGP_BALBcJ_T0011554.1 MGP_BALBcJ_G0009679.1 mouse_genomes_project 4 95259108 95259222 + Gm24203 misc_RNA misc_RNA MGP_BALBcJ_T0101107.1 MGP_BALBcJ_G0039143.1 mouse_genomes_project 4 24961024 24961153 + Gm25378 snoRNA snoRNA MGP_BALBcJ_T0101174.1 MGP_BALBcJ_G0039210.1 mouse_genomes_project 4 129475766 129475895 + Snora44 snoRNA snoRNA MGP_BALBcJ_T0010555.1 MGP_BALBcJ_G0008680.1 mouse_genomes_project 4 7572750 7572836 + Mir684-2 miRNA miRNA MGP_BALBcJ_T0065143.1 MGP_BALBcJ_G0028145.1 mouse_genomes_project 4 38562707 38568861 + MGP_BALBcJ_P0065143 protein_coding protein_coding MGP_BALBcJ_T0004413.1 MGP_BALBcJ_G0003846.1 mouse_genomes_project 4 16880060 16884172 + Gm11872 antisense antisense MGP_BALBcJ_T0066644.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103908175 104029305 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066645.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103908944 104048222 + MGP_BALBcJ_P0066645 Ssbp3 protein_coding protein_coding MGP_BALBcJ_T0066646.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103908985 104036978 + MGP_BALBcJ_P0066646 Ssbp3 protein_coding protein_coding MGP_BALBcJ_T0066647.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103909007 104047095 + MGP_BALBcJ_P0066647 Ssbp3 protein_coding protein_coding MGP_BALBcJ_T0066648.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103909141 104047027 + MGP_BALBcJ_P0066648 Ssbp3 protein_coding protein_coding MGP_BALBcJ_T0066649.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103909335 104008298 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066650.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103909772 104047044 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066651.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103920626 104029257 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066652.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103920666 104036484 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066653.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103939710 104047072 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066654.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103953568 104047220 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066655.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 103963988 104029303 + MGP_BALBcJ_P0066655 Ssbp3 protein_coding protein_coding MGP_BALBcJ_T0066656.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 104025912 104035599 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066657.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 104029067 104029721 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066658.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 104036437 104047048 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066659.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 104036468 104038893 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0066660.1 MGP_BALBcJ_G0028510.1 mouse_genomes_project 4 104045482 104046979 + Ssbp3 protein_coding processed_transcript MGP_BALBcJ_T0101141.1 MGP_BALBcJ_G0039177.1 mouse_genomes_project 4 72190663 72190793 - Gm22864 snoRNA snoRNA MGP_BALBcJ_T0069673.1 MGP_BALBcJ_G0029183.1 mouse_genomes_project 4 152994215 153000216 - MGP_BALBcJ_P0069673 Tnfrsf14 protein_coding protein_coding MGP_BALBcJ_T0069674.1 MGP_BALBcJ_G0029183.1 mouse_genomes_project 4 152994215 153000091 - MGP_BALBcJ_P0069674 Tnfrsf14 protein_coding protein_coding MGP_BALBcJ_T0069675.1 MGP_BALBcJ_G0029183.1 mouse_genomes_project 4 152994249 153000060 - MGP_BALBcJ_P0069675 Tnfrsf14 protein_coding unknown_likely_coding MGP_BALBcJ_T0069676.1 MGP_BALBcJ_G0029183.1 mouse_genomes_project 4 152994266 153000566 - MGP_BALBcJ_P0069676 Tnfrsf14 protein_coding protein_coding MGP_BALBcJ_T0069677.1 MGP_BALBcJ_G0029183.1 mouse_genomes_project 4 152996476 153000566 - Tnfrsf14 protein_coding processed_transcript MGP_BALBcJ_T0069678.1 MGP_BALBcJ_G0029183.1 mouse_genomes_project 4 152998641 153000577 - Tnfrsf14 protein_coding processed_transcript MGP_BALBcJ_T0007867.1 MGP_BALBcJ_G0006430.1 mouse_genomes_project 4 89558599 89578907 + Gm12637 lincRNA lincRNA MGP_BALBcJ_T0069328.1 MGP_BALBcJ_G0029121.1 mouse_genomes_project 4 147421177 147440222 - MGP_BALBcJ_P0069328 Nmnat1 protein_coding protein_coding MGP_BALBcJ_T0069329.1 MGP_BALBcJ_G0029121.1 mouse_genomes_project 4 147422683 147440218 - MGP_BALBcJ_P0069329 Nmnat1 protein_coding protein_coding MGP_BALBcJ_T0069330.1 MGP_BALBcJ_G0029121.1 mouse_genomes_project 4 147422723 147440192 - MGP_BALBcJ_P0069330 Nmnat1 protein_coding protein_coding MGP_BALBcJ_T0069331.1 MGP_BALBcJ_G0029121.1 mouse_genomes_project 4 147422920 147440237 - MGP_BALBcJ_P0069331 Nmnat1 protein_coding unknown_likely_coding MGP_BALBcJ_T0069332.1 MGP_BALBcJ_G0029121.1 mouse_genomes_project 4 147429451 147440183 - MGP_BALBcJ_P0069332 Nmnat1 protein_coding protein_coding MGP_BALBcJ_T0007873.1 MGP_BALBcJ_G0006435.1 mouse_genomes_project 4 92372341 92373154 - Gm29064 lincRNA lincRNA MGP_BALBcJ_T0014741.1 MGP_BALBcJ_G0012838.1 mouse_genomes_project 4 121890469 121891108 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014640.1 MGP_BALBcJ_G0012737.1 mouse_genomes_project 4 92008176 92008621 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067777.1 MGP_BALBcJ_G0028760.1 mouse_genomes_project 4 123528738 123534061 - Adprhl2 protein_coding processed_transcript MGP_BALBcJ_T0067778.1 MGP_BALBcJ_G0028760.1 mouse_genomes_project 4 123528738 123534395 - MGP_BALBcJ_P0067778 Adprhl2 protein_coding protein_coding MGP_BALBcJ_T0067779.1 MGP_BALBcJ_G0028760.1 mouse_genomes_project 4 123528743 123534159 - Adprhl2 protein_coding processed_transcript MGP_BALBcJ_T0067780.1 MGP_BALBcJ_G0028760.1 mouse_genomes_project 4 123530842 123534053 - Adprhl2 protein_coding processed_transcript MGP_BALBcJ_T0001420.1 MGP_BALBcJ_G0001342.1 mouse_genomes_project 4 132722272 132722602 + TEC TEC MGP_BALBcJ_T0014758.1 MGP_BALBcJ_G0012855.1 mouse_genomes_project 4 129986933 129987218 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067398.1 MGP_BALBcJ_G0028656.1 mouse_genomes_project 4 115676491 115683277 + MGP_BALBcJ_P0067398 Ebna1bp2 protein_coding protein_coding MGP_BALBcJ_T0067399.1 MGP_BALBcJ_G0028656.1 mouse_genomes_project 4 115676540 115677624 + Ebna1bp2 protein_coding processed_transcript MGP_BALBcJ_T0067400.1 MGP_BALBcJ_G0028656.1 mouse_genomes_project 4 115676542 115677355 + Ebna1bp2 protein_coding processed_transcript MGP_BALBcJ_T0067401.1 MGP_BALBcJ_G0028656.1 mouse_genomes_project 4 115676852 115679693 + MGP_BALBcJ_P0067401 Ebna1bp2 protein_coding protein_coding MGP_BALBcJ_T0067402.1 MGP_BALBcJ_G0028656.1 mouse_genomes_project 4 115676918 115681119 + Ebna1bp2 protein_coding processed_transcript MGP_BALBcJ_T0068996.1 MGP_BALBcJ_G0029029.1 mouse_genomes_project 4 138866597 138878290 - MGP_BALBcJ_P0068996 Clcnkb protein_coding protein_coding MGP_BALBcJ_T0068997.1 MGP_BALBcJ_G0029029.1 mouse_genomes_project 4 138866597 138878290 - MGP_BALBcJ_P0068997 Clcnkb protein_coding protein_coding MGP_BALBcJ_T0068998.1 MGP_BALBcJ_G0029029.1 mouse_genomes_project 4 138866597 138867602 - MGP_BALBcJ_P0068998 Clcnkb protein_coding protein_coding MGP_BALBcJ_T0068999.1 MGP_BALBcJ_G0029029.1 mouse_genomes_project 4 138876571 138878237 - Clcnkb protein_coding processed_transcript MGP_BALBcJ_T0067390.1 MGP_BALBcJ_G0028654.1 mouse_genomes_project 4 115599878 115602660 - MGP_BALBcJ_P0067390 Tmem125 protein_coding protein_coding MGP_BALBcJ_T0067391.1 MGP_BALBcJ_G0028654.1 mouse_genomes_project 4 115600796 115602976 - MGP_BALBcJ_P0067391 Tmem125 protein_coding protein_coding MGP_BALBcJ_T0067392.1 MGP_BALBcJ_G0028654.1 mouse_genomes_project 4 115600954 115601894 - MGP_BALBcJ_P0067392 Tmem125 protein_coding protein_coding MGP_BALBcJ_T0067393.1 MGP_BALBcJ_G0028654.1 mouse_genomes_project 4 115601004 115602221 - MGP_BALBcJ_P0067393 Tmem125 protein_coding protein_coding MGP_BALBcJ_T0067394.1 MGP_BALBcJ_G0028654.1 mouse_genomes_project 4 115601533 115602181 - Tmem125 protein_coding processed_transcript MGP_BALBcJ_T0007965.1 MGP_BALBcJ_G0006497.1 mouse_genomes_project 4 129520390 129522004 + Gm17300 lincRNA lincRNA MGP_BALBcJ_T0064728.1 MGP_BALBcJ_G0028041.1 mouse_genomes_project 4 12371509 12398824 + MGP_BALBcJ_P0064728 Calb1 protein_coding protein_coding MGP_BALBcJ_T0064729.1 MGP_BALBcJ_G0028041.1 mouse_genomes_project 4 12371511 12385993 + Calb1 protein_coding retained_intron MGP_BALBcJ_T0064730.1 MGP_BALBcJ_G0028041.1 mouse_genomes_project 4 12375700 12386285 + Calb1 protein_coding retained_intron MGP_BALBcJ_T0001413.1 MGP_BALBcJ_G0001335.1 mouse_genomes_project 4 103282683 103283727 - TEC TEC MGP_BALBcJ_T0014812.1 MGP_BALBcJ_G0012909.1 mouse_genomes_project 4 150179815 150180301 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014578.1 MGP_BALBcJ_G0012675.1 mouse_genomes_project 4 69957624 69963757 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014700.1 MGP_BALBcJ_G0012797.1 mouse_genomes_project 4 112668086 112669178 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007788.1 MGP_BALBcJ_G0006362.1 mouse_genomes_project 4 19441557 19451865 - 1700025O08Rik lincRNA lincRNA MGP_BALBcJ_T0065763.1 MGP_BALBcJ_G0028290.1 mouse_genomes_project 4 53545629 53598509 - MGP_BALBcJ_P0065763 Ikbkap protein_coding protein_coding MGP_BALBcJ_T0065764.1 MGP_BALBcJ_G0028290.1 mouse_genomes_project 4 53546961 53553254 - Ikbkap protein_coding retained_intron MGP_BALBcJ_T0065765.1 MGP_BALBcJ_G0028290.1 mouse_genomes_project 4 53546964 53559633 - Ikbkap protein_coding retained_intron MGP_BALBcJ_T0065766.1 MGP_BALBcJ_G0028290.1 mouse_genomes_project 4 53550823 53554698 - Ikbkap protein_coding retained_intron MGP_BALBcJ_T0065767.1 MGP_BALBcJ_G0028290.1 mouse_genomes_project 4 53564174 53568905 - Ikbkap protein_coding retained_intron MGP_BALBcJ_T0065768.1 MGP_BALBcJ_G0028290.1 mouse_genomes_project 4 53572745 53576019 - Ikbkap protein_coding retained_intron MGP_BALBcJ_T0099869.1 MGP_BALBcJ_G0037905.1 mouse_genomes_project 4 117991460 117991564 + Gm24678 snRNA snRNA MGP_BALBcJ_T0069244.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549431 146563926 - MGP_BALBcJ_P0069244 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069245.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549431 146563949 - MGP_BALBcJ_P0069245 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069246.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549431 146563926 - MGP_BALBcJ_P0069246 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069247.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549431 146563926 - MGP_BALBcJ_P0069247 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069248.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549436 146563692 - MGP_BALBcJ_P0069248 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069249.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549437 146553190 - Tardbp protein_coding processed_transcript MGP_BALBcJ_T0069250.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549437 146555654 - MGP_BALBcJ_P0069250 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069251.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146549534 146556163 - MGP_BALBcJ_P0069251 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069252.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146552517 146554958 - Tardbp protein_coding processed_transcript MGP_BALBcJ_T0069253.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146552661 146554020 - Tardbp protein_coding processed_transcript MGP_BALBcJ_T0069254.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146552810 146554735 - Tardbp protein_coding processed_transcript MGP_BALBcJ_T0069255.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146552970 146563695 - MGP_BALBcJ_P0069255 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069256.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553687 146555250 - MGP_BALBcJ_P0069256 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069257.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553767 146558888 - MGP_BALBcJ_P0069257 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069258.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553772 146557582 - MGP_BALBcJ_P0069258 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069259.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553776 146563688 - MGP_BALBcJ_P0069259 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069260.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553776 146557577 - MGP_BALBcJ_P0069260 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069261.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553777 146556237 - MGP_BALBcJ_P0069261 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069262.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553777 146563688 - MGP_BALBcJ_P0069262 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069263.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146553914 146557504 - MGP_BALBcJ_P0069263 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069264.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554081 146555563 - MGP_BALBcJ_P0069264 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069265.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554190 146556173 - MGP_BALBcJ_P0069265 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069266.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554333 146562287 - MGP_BALBcJ_P0069266 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069267.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554436 146562287 - MGP_BALBcJ_P0069267 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069268.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554436 146562287 - MGP_BALBcJ_P0069268 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069269.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554490 146558995 - MGP_BALBcJ_P0069269 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069270.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146554917 146563700 - MGP_BALBcJ_P0069270 Tardbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069271.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146555487 146563684 - MGP_BALBcJ_P0069271 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069272.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146557579 146563256 - MGP_BALBcJ_P0069272 Tardbp protein_coding protein_coding MGP_BALBcJ_T0069273.1 MGP_BALBcJ_G0029110.1 mouse_genomes_project 4 146562009 146563688 - Tardbp protein_coding retained_intron MGP_BALBcJ_T0014400.1 MGP_BALBcJ_G0012497.1 mouse_genomes_project 4 10893766 10894207 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068645.1 MGP_BALBcJ_G0028944.1 mouse_genomes_project 4 133467449 133491149 + MGP_BALBcJ_P0068645 E2f2 protein_coding protein_coding MGP_BALBcJ_T0068646.1 MGP_BALBcJ_G0028944.1 mouse_genomes_project 4 133475818 133481853 + E2f2 protein_coding processed_transcript MGP_BALBcJ_T0101179.1 MGP_BALBcJ_G0039215.1 mouse_genomes_project 4 131402556 131402644 - Gm27619 snoRNA snoRNA MGP_BALBcJ_T0067534.1 MGP_BALBcJ_G0028694.1 mouse_genomes_project 4 117662913 117690421 + MGP_BALBcJ_P0067534 Gm8439 protein_coding protein_coding MGP_BALBcJ_T0102535.1 MGP_BALBcJ_G0040351.1 mouse_genomes_project 4 112655777 112657956 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099872.1 MGP_BALBcJ_G0037908.1 mouse_genomes_project 4 121869460 121869563 - Gm24480 snRNA snRNA MGP_BALBcJ_T0069705.1 MGP_BALBcJ_G0029188.1 mouse_genomes_project 4 153154977 153167494 - Rer1 protein_coding processed_transcript MGP_BALBcJ_T0069706.1 MGP_BALBcJ_G0029188.1 mouse_genomes_project 4 153154977 153167496 - MGP_BALBcJ_P0069706 Rer1 protein_coding protein_coding MGP_BALBcJ_T0069707.1 MGP_BALBcJ_G0029188.1 mouse_genomes_project 4 153163808 153167505 - Rer1 protein_coding processed_transcript MGP_BALBcJ_T0004440.1 MGP_BALBcJ_G0003868.1 mouse_genomes_project 4 50064665 50069595 + 4930522O17Rik antisense antisense MGP_BALBcJ_T0067781.1 MGP_BALBcJ_G0028761.1 mouse_genomes_project 4 123534812 123538380 - MGP_BALBcJ_P0067781 Tekt2 protein_coding protein_coding MGP_BALBcJ_T0067782.1 MGP_BALBcJ_G0028761.1 mouse_genomes_project 4 123534814 123537891 - MGP_BALBcJ_P0067782 Tekt2 protein_coding protein_coding MGP_BALBcJ_T0067783.1 MGP_BALBcJ_G0028761.1 mouse_genomes_project 4 123536399 123538322 - Tekt2 protein_coding retained_intron MGP_BALBcJ_T0067784.1 MGP_BALBcJ_G0028761.1 mouse_genomes_project 4 123537031 123538335 - MGP_BALBcJ_P0067784 Tekt2 protein_coding protein_coding MGP_BALBcJ_T0067785.1 MGP_BALBcJ_G0028761.1 mouse_genomes_project 4 123537575 123538127 - MGP_BALBcJ_P0067785 Tekt2 protein_coding protein_coding MGP_BALBcJ_T0067610.1 MGP_BALBcJ_G0028719.1 mouse_genomes_project 4 120379192 120395513 + MGP_BALBcJ_P0067610 Heyl protein_coding protein_coding MGP_BALBcJ_T0067611.1 MGP_BALBcJ_G0028719.1 mouse_genomes_project 4 120379489 120386301 + Heyl protein_coding processed_transcript MGP_BALBcJ_T0067612.1 MGP_BALBcJ_G0028719.1 mouse_genomes_project 4 120385398 120391628 + Heyl protein_coding processed_transcript MGP_BALBcJ_T0065069.1 MGP_BALBcJ_G0028129.1 mouse_genomes_project 4 38128211 38172350 + MGP_BALBcJ_P0065069 Ubap1 protein_coding protein_coding MGP_BALBcJ_T0065070.1 MGP_BALBcJ_G0028129.1 mouse_genomes_project 4 38128211 38171591 + MGP_BALBcJ_P0065070 Ubap1 protein_coding protein_coding MGP_BALBcJ_T0065071.1 MGP_BALBcJ_G0028129.1 mouse_genomes_project 4 38128263 38152531 + Ubap1 protein_coding processed_transcript MGP_BALBcJ_T0065072.1 MGP_BALBcJ_G0028129.1 mouse_genomes_project 4 38152493 38161225 + Ubap1 protein_coding processed_transcript MGP_BALBcJ_T0065073.1 MGP_BALBcJ_G0028129.1 mouse_genomes_project 4 38152970 38170517 + MGP_BALBcJ_P0065073 Ubap1 protein_coding protein_coding MGP_BALBcJ_T0065117.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38537711 38540575 - MGP_BALBcJ_P0065117 Sigmar1 protein_coding protein_coding MGP_BALBcJ_T0065118.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38537711 38540575 - MGP_BALBcJ_P0065118 Sigmar1 protein_coding protein_coding MGP_BALBcJ_T0065119.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38538316 38544283 - Sigmar1 protein_coding processed_transcript MGP_BALBcJ_T0065120.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38538721 38554525 - Sigmar1 protein_coding processed_transcript MGP_BALBcJ_T0065121.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38539664 38540402 - Sigmar1 protein_coding retained_intron MGP_BALBcJ_T0065122.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38539796 38540264 - Sigmar1 protein_coding retained_intron MGP_BALBcJ_T0065123.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38539818 38540536 - Sigmar1 protein_coding processed_transcript MGP_BALBcJ_T0065124.1 MGP_BALBcJ_G0028142.1 mouse_genomes_project 4 38553953 38555283 - Sigmar1 protein_coding processed_transcript MGP_BALBcJ_T0014419.1 MGP_BALBcJ_G0012516.1 mouse_genomes_project 4 14521763 14522773 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065502.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41768480 41783647 + MGP_BALBcJ_P0065502 Polr1e protein_coding protein_coding MGP_BALBcJ_T0065503.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41768559 41782320 + MGP_BALBcJ_P0065503 Polr1e protein_coding protein_coding MGP_BALBcJ_T0065504.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41768560 41786520 + MGP_BALBcJ_P0065504 Polr1e protein_coding protein_coding MGP_BALBcJ_T0065505.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41768594 41776768 + Polr1e protein_coding processed_transcript MGP_BALBcJ_T0065506.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41769132 41782067 + MGP_BALBcJ_P0065506 Polr1e protein_coding protein_coding MGP_BALBcJ_T0065507.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41779041 41781340 + Polr1e protein_coding processed_transcript MGP_BALBcJ_T0065508.1 MGP_BALBcJ_G0028216.1 mouse_genomes_project 4 41781159 41782315 + Polr1e protein_coding processed_transcript MGP_BALBcJ_T0066421.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95937497 96136439 - MGP_BALBcJ_P0066421 Dock7 protein_coding protein_coding MGP_BALBcJ_T0066422.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95937680 95962132 - Dock7 protein_coding processed_transcript MGP_BALBcJ_T0066423.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95937681 96136298 - MGP_BALBcJ_P0066423 Dock7 protein_coding protein_coding MGP_BALBcJ_T0066424.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95937683 96033101 - MGP_BALBcJ_P0066424 Dock7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066425.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95937683 96136298 - MGP_BALBcJ_P0066425 Dock7 protein_coding protein_coding MGP_BALBcJ_T0066426.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95938084 96136298 - MGP_BALBcJ_P0066426 Dock7 protein_coding protein_coding MGP_BALBcJ_T0066427.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95953935 95954888 - Dock7 protein_coding retained_intron MGP_BALBcJ_T0066428.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95953938 95958069 - Dock7 protein_coding retained_intron MGP_BALBcJ_T0066429.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95954340 95964536 - Dock7 protein_coding processed_transcript MGP_BALBcJ_T0066430.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95955245 95967808 - MGP_BALBcJ_P0066430 Dock7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066431.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95964901 95972167 - Dock7 protein_coding retained_intron MGP_BALBcJ_T0066432.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95968677 95970004 - Dock7 protein_coding processed_transcript MGP_BALBcJ_T0066433.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 95999264 96019035 - MGP_BALBcJ_P0066433 Dock7 protein_coding protein_coding MGP_BALBcJ_T0066434.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 96001348 96019000 - MGP_BALBcJ_P0066434 Dock7 protein_coding protein_coding MGP_BALBcJ_T0066435.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 96002577 96004929 - Dock7 protein_coding retained_intron MGP_BALBcJ_T0066436.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 96011084 96018210 - Dock7 protein_coding processed_transcript MGP_BALBcJ_T0066437.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 96017670 96068201 - MGP_BALBcJ_P0066437 Dock7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066441.1 MGP_BALBcJ_G0028458.1 mouse_genomes_project 4 96076607 96082223 - Dock7 protein_coding retained_intron MGP_BALBcJ_T0064650.1 MGP_BALBcJ_G0028020.1 mouse_genomes_project 4 7709350 7752315 - MGP_BALBcJ_P0064650 Dpy19l4 protein_coding protein_coding MGP_BALBcJ_T0064651.1 MGP_BALBcJ_G0028020.1 mouse_genomes_project 4 7709350 7771532 - MGP_BALBcJ_P0064651 Dpy19l4 protein_coding protein_coding MGP_BALBcJ_T0064652.1 MGP_BALBcJ_G0028020.1 mouse_genomes_project 4 7724576 7771532 - MGP_BALBcJ_P0064652 Dpy19l4 protein_coding protein_coding MGP_BALBcJ_T0064653.1 MGP_BALBcJ_G0028020.1 mouse_genomes_project 4 7727735 7771470 - MGP_BALBcJ_P0064653 Dpy19l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064654.1 MGP_BALBcJ_G0028020.1 mouse_genomes_project 4 7752330 7771442 - Dpy19l4 protein_coding processed_transcript MGP_BALBcJ_T0064655.1 MGP_BALBcJ_G0028020.1 mouse_genomes_project 4 7766440 7771495 - Dpy19l4 protein_coding processed_transcript MGP_BALBcJ_T0014540.1 MGP_BALBcJ_G0012637.1 mouse_genomes_project 4 51643073 51644664 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014473.1 MGP_BALBcJ_G0012570.1 mouse_genomes_project 4 29549768 29550378 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067456.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116349821 116366917 - MGP_BALBcJ_P0067456 Ybx1 protein_coding protein_coding MGP_BALBcJ_T0067457.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116349830 116354621 - MGP_BALBcJ_P0067457 Ybx1 protein_coding protein_coding MGP_BALBcJ_T0067458.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116350005 116351289 - Ybx1 protein_coding processed_transcript MGP_BALBcJ_T0067459.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116352971 116354015 - Ybx1 protein_coding processed_transcript MGP_BALBcJ_T0067460.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116354101 116366803 - Ybx1 protein_coding processed_transcript MGP_BALBcJ_T0067461.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116356830 116366793 - Ybx1 protein_coding processed_transcript MGP_BALBcJ_T0067462.1 MGP_BALBcJ_G0028678.1 mouse_genomes_project 4 116365374 116366813 - Ybx1 protein_coding processed_transcript MGP_BALBcJ_T0010559.1 MGP_BALBcJ_G0008684.1 mouse_genomes_project 4 12433226 12433318 - Mir6400 miRNA miRNA MGP_BALBcJ_T0065404.1 MGP_BALBcJ_G0028196.1 mouse_genomes_project 4 40393715 40402724 - MGP_BALBcJ_P0065404 Fam221b protein_coding protein_coding MGP_BALBcJ_T0065405.1 MGP_BALBcJ_G0028196.1 mouse_genomes_project 4 40397199 40402728 - Fam221b protein_coding retained_intron MGP_BALBcJ_T0102547.1 MGP_BALBcJ_G0040363.1 mouse_genomes_project 4 136732149 136733347 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0067273.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114308907 114326898 - MGP_BALBcJ_P0067273 Rnf220 protein_coding protein_coding MGP_BALBcJ_T0067274.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114308915 114541852 - MGP_BALBcJ_P0067274 Rnf220 protein_coding protein_coding MGP_BALBcJ_T0067275.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114309379 114416266 - MGP_BALBcJ_P0067275 Rnf220 protein_coding protein_coding MGP_BALBcJ_T0067276.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114313975 114322930 - Rnf220 protein_coding processed_transcript MGP_BALBcJ_T0067277.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114314883 114327300 - MGP_BALBcJ_P0067277 Rnf220 protein_coding protein_coding MGP_BALBcJ_T0067278.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114322547 114326912 - Rnf220 protein_coding processed_transcript MGP_BALBcJ_T0067279.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114322834 114326581 - Rnf220 protein_coding processed_transcript MGP_BALBcJ_T0067280.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114323344 114339644 - Rnf220 protein_coding processed_transcript MGP_BALBcJ_T0067281.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114345654 114541749 - Rnf220 protein_coding processed_transcript MGP_BALBcJ_T0067282.1 MGP_BALBcJ_G0028632.1 mouse_genomes_project 4 114535055 114539832 - Rnf220 protein_coding processed_transcript MGP_BALBcJ_T0066600.1 MGP_BALBcJ_G0028498.1 mouse_genomes_project 4 102774329 102778874 + MGP_BALBcJ_P0066600 Gm12728 protein_coding protein_coding MGP_BALBcJ_T0066601.1 MGP_BALBcJ_G0028498.1 mouse_genomes_project 4 102774993 102778874 + MGP_BALBcJ_P0066601 Gm12728 protein_coding protein_coding MGP_BALBcJ_T0066602.1 MGP_BALBcJ_G0028498.1 mouse_genomes_project 4 102778664 102779157 + Gm12728 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0066547.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100027195 100070129 - Wdr78 protein_coding retained_intron MGP_BALBcJ_T0066548.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100027195 100111874 - MGP_BALBcJ_P0066548 Wdr78 protein_coding protein_coding MGP_BALBcJ_T0066549.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100027196 100069950 - MGP_BALBcJ_P0066549 Wdr78 protein_coding protein_coding MGP_BALBcJ_T0066550.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100027199 100112130 - MGP_BALBcJ_P0066550 Wdr78 protein_coding protein_coding MGP_BALBcJ_T0066551.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100027199 100111799 - MGP_BALBcJ_P0066551 Wdr78 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066552.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100027231 100072754 - Wdr78 protein_coding retained_intron MGP_BALBcJ_T0066553.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100028402 100030739 - Wdr78 protein_coding processed_transcript MGP_BALBcJ_T0066554.1 MGP_BALBcJ_G0028486.1 mouse_genomes_project 4 100079032 100084451 - MGP_BALBcJ_P0066554 Wdr78 protein_coding protein_coding MGP_BALBcJ_T0064723.1 MGP_BALBcJ_G0028039.1 mouse_genomes_project 4 11416862 11626374 - MGP_BALBcJ_P0064723 Necab1 protein_coding protein_coding MGP_BALBcJ_T0064724.1 MGP_BALBcJ_G0028039.1 mouse_genomes_project 4 11416863 11626159 - MGP_BALBcJ_P0064724 Necab1 protein_coding unknown_likely_coding MGP_BALBcJ_T0064725.1 MGP_BALBcJ_G0028039.1 mouse_genomes_project 4 11419546 11627021 - MGP_BALBcJ_P0064725 Necab1 protein_coding protein_coding MGP_BALBcJ_T0064726.1 MGP_BALBcJ_G0028039.1 mouse_genomes_project 4 11583248 11626204 - Necab1 protein_coding processed_transcript MGP_BALBcJ_T0014534.1 MGP_BALBcJ_G0012631.1 mouse_genomes_project 4 50127488 50127935 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069596.1 MGP_BALBcJ_G0029169.1 mouse_genomes_project 4 152081966 152091771 + MGP_BALBcJ_P0069596 Lrrc47 protein_coding protein_coding MGP_BALBcJ_T0069597.1 MGP_BALBcJ_G0029169.1 mouse_genomes_project 4 152082038 152091770 + MGP_BALBcJ_P0069597 Lrrc47 protein_coding protein_coding MGP_BALBcJ_T0069598.1 MGP_BALBcJ_G0029169.1 mouse_genomes_project 4 152087657 152089328 + Lrrc47 protein_coding retained_intron MGP_BALBcJ_T0069599.1 MGP_BALBcJ_G0029169.1 mouse_genomes_project 4 152089210 152091149 + MGP_BALBcJ_P0069599 Lrrc47 protein_coding protein_coding MGP_BALBcJ_T0069600.1 MGP_BALBcJ_G0029169.1 mouse_genomes_project 4 152089896 152090925 + MGP_BALBcJ_P0069600 Lrrc47 protein_coding protein_coding MGP_BALBcJ_T0101705.1 MGP_BALBcJ_G0039684.1 mouse_genomes_project 4 129061892 129062414 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0064904.1 MGP_BALBcJ_G0028086.1 mouse_genomes_project 4 29695732 29710304 + MGP_BALBcJ_P0064904 Ube2j1 protein_coding protein_coding MGP_BALBcJ_T0064905.1 MGP_BALBcJ_G0028086.1 mouse_genomes_project 4 29695790 29717453 + MGP_BALBcJ_P0064905 Ube2j1 protein_coding protein_coding MGP_BALBcJ_T0064929.1 MGP_BALBcJ_G0028095.1 mouse_genomes_project 4 31241559 31257418 + MGP_BALBcJ_P0064929 Akirin2 protein_coding protein_coding MGP_BALBcJ_T0067665.1 MGP_BALBcJ_G0028734.1 mouse_genomes_project 4 121886250 121904601 + MGP_BALBcJ_P0067665 Sf3a3 protein_coding protein_coding MGP_BALBcJ_T0067666.1 MGP_BALBcJ_G0028734.1 mouse_genomes_project 4 121886357 121890198 + Sf3a3 protein_coding processed_transcript MGP_BALBcJ_T0067667.1 MGP_BALBcJ_G0028734.1 mouse_genomes_project 4 121893203 121894853 + Sf3a3 protein_coding processed_transcript MGP_BALBcJ_T0065897.1 MGP_BALBcJ_G0028325.1 mouse_genomes_project 4 59007369 59010249 - MGP_BALBcJ_P0065897 protein_coding protein_coding MGP_BALBcJ_T0101158.1 MGP_BALBcJ_G0039194.1 mouse_genomes_project 4 114196087 114196166 - Snord55 snoRNA snoRNA MGP_BALBcJ_T0067536.1 MGP_BALBcJ_G0028696.1 mouse_genomes_project 4 117780432 117831482 - MGP_BALBcJ_P0067536 Kcnq4 protein_coding protein_coding MGP_BALBcJ_T0067537.1 MGP_BALBcJ_G0028696.1 mouse_genomes_project 4 117799499 117833653 - Kcnq4 protein_coding processed_transcript MGP_BALBcJ_T0068931.1 MGP_BALBcJ_G0029016.1 mouse_genomes_project 4 138407806 138426076 + MGP_BALBcJ_P0068931 Sdhb protein_coding protein_coding MGP_BALBcJ_T0068932.1 MGP_BALBcJ_G0029016.1 mouse_genomes_project 4 138408004 138423679 + Sdhb protein_coding processed_transcript MGP_BALBcJ_T0068933.1 MGP_BALBcJ_G0029016.1 mouse_genomes_project 4 138408006 138421180 + Sdhb protein_coding processed_transcript MGP_BALBcJ_T0001415.1 MGP_BALBcJ_G0001337.1 mouse_genomes_project 4 116367340 116367774 - TEC TEC MGP_BALBcJ_T0010603.1 MGP_BALBcJ_G0008728.1 mouse_genomes_project 4 121903834 121903943 + Mir697 miRNA miRNA MGP_BALBcJ_T0010601.1 MGP_BALBcJ_G0008726.1 mouse_genomes_project 4 118058148 118058212 - Mir7015 miRNA miRNA MGP_BALBcJ_T0066782.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105055554 105132598 - MGP_BALBcJ_P0066782 Scp2 protein_coding protein_coding MGP_BALBcJ_T0066783.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105055982 105059913 - Scp2 protein_coding processed_transcript MGP_BALBcJ_T0066784.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105056092 105084264 - Scp2 protein_coding processed_transcript MGP_BALBcJ_T0066785.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105056264 105084320 - MGP_BALBcJ_P0066785 Scp2 protein_coding protein_coding MGP_BALBcJ_T0066786.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105056662 105132542 - Scp2 protein_coding processed_transcript MGP_BALBcJ_T0066787.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105100060 105132570 - MGP_BALBcJ_P0066787 Scp2 protein_coding protein_coding MGP_BALBcJ_T0066788.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105104709 105132461 - Scp2 protein_coding processed_transcript MGP_BALBcJ_T0066789.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105105018 105160002 - Scp2 protein_coding processed_transcript MGP_BALBcJ_T0066790.1 MGP_BALBcJ_G0028530.1 mouse_genomes_project 4 105115933 105160006 - MGP_BALBcJ_P0066790 Scp2 protein_coding protein_coding MGP_BALBcJ_T0068701.1 MGP_BALBcJ_G0028960.1 mouse_genomes_project 4 134302333 134371661 - MGP_BALBcJ_P0068701 Zbtb40 protein_coding unknown_likely_coding MGP_BALBcJ_T0068702.1 MGP_BALBcJ_G0028960.1 mouse_genomes_project 4 134302336 134371563 - MGP_BALBcJ_P0068702 Zbtb40 protein_coding protein_coding MGP_BALBcJ_T0068703.1 MGP_BALBcJ_G0028960.1 mouse_genomes_project 4 134337256 134371669 - Zbtb40 protein_coding retained_intron MGP_BALBcJ_T0011563.1 MGP_BALBcJ_G0009688.1 mouse_genomes_project 4 120638510 120638616 + Gm23548 misc_RNA misc_RNA MGP_BALBcJ_T0068624.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133263785 133276453 - MGP_BALBcJ_P0068624 Pithd1 protein_coding protein_coding MGP_BALBcJ_T0068625.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133264391 133275125 - Pithd1 protein_coding processed_transcript MGP_BALBcJ_T0068626.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133264719 133268246 - Pithd1 protein_coding retained_intron MGP_BALBcJ_T0068627.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133264721 133275511 - MGP_BALBcJ_P0068627 Pithd1 protein_coding protein_coding MGP_BALBcJ_T0068628.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133265532 133276106 - MGP_BALBcJ_P0068628 Pithd1 protein_coding protein_coding MGP_BALBcJ_T0068629.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133267673 133276270 - Pithd1 protein_coding retained_intron MGP_BALBcJ_T0068630.1 MGP_BALBcJ_G0028940.1 mouse_genomes_project 4 133275602 133276276 - Pithd1 protein_coding processed_transcript MGP_BALBcJ_T0099864.1 MGP_BALBcJ_G0037900.1 mouse_genomes_project 4 114062218 114062317 + Gm22335 snRNA snRNA MGP_BALBcJ_T0101140.1 MGP_BALBcJ_G0039176.1 mouse_genomes_project 4 71568442 71568574 + Gm26379 snoRNA snoRNA MGP_BALBcJ_T0010566.1 MGP_BALBcJ_G0008691.1 mouse_genomes_project 4 33365063 33365144 - Mir876 miRNA miRNA MGP_BALBcJ_T0067700.1 MGP_BALBcJ_G0028742.1 mouse_genomes_project 4 122169775 122192310 + MGP_BALBcJ_P0067700 Rspo1 protein_coding protein_coding MGP_BALBcJ_T0067701.1 MGP_BALBcJ_G0028742.1 mouse_genomes_project 4 122190690 122191736 + Rspo1 protein_coding processed_transcript MGP_BALBcJ_T0099825.1 MGP_BALBcJ_G0037861.1 mouse_genomes_project 4 37825886 37825993 + Gm25637 snRNA snRNA MGP_BALBcJ_T0067079.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 112985411 113035256 - Faah protein_coding retained_intron MGP_BALBcJ_T0067080.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113014407 113035297 - Faah protein_coding retained_intron MGP_BALBcJ_T0067081.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113014407 113035507 - MGP_BALBcJ_P0067081 Faah protein_coding protein_coding MGP_BALBcJ_T0067082.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113015931 113035308 - Faah protein_coding retained_intron MGP_BALBcJ_T0067083.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113016044 113017807 - Faah protein_coding retained_intron MGP_BALBcJ_T0067084.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113016452 113017676 - Faah protein_coding retained_intron MGP_BALBcJ_T0067085.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113019463 113035256 - Faah protein_coding processed_transcript MGP_BALBcJ_T0067086.1 MGP_BALBcJ_G0028596.1 mouse_genomes_project 4 113023468 113035278 - Faah protein_coding processed_transcript MGP_BALBcJ_T0066589.1 MGP_BALBcJ_G0028492.1 mouse_genomes_project 4 101766707 101804728 + MGP_BALBcJ_P0066589 C8b protein_coding protein_coding MGP_BALBcJ_T0066590.1 MGP_BALBcJ_G0028492.1 mouse_genomes_project 4 101766780 101804739 + MGP_BALBcJ_P0066590 C8b protein_coding protein_coding MGP_BALBcJ_T0066591.1 MGP_BALBcJ_G0028492.1 mouse_genomes_project 4 101799775 101805108 + C8b protein_coding processed_transcript MGP_BALBcJ_T0014803.1 MGP_BALBcJ_G0012900.1 mouse_genomes_project 4 145961328 145962101 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068490.1 MGP_BALBcJ_G0028909.1 mouse_genomes_project 4 131634665 131656896 + Pafah2 protein_coding processed_transcript MGP_BALBcJ_T0068491.1 MGP_BALBcJ_G0028909.1 mouse_genomes_project 4 131634702 131650674 + Pafah2 protein_coding processed_transcript MGP_BALBcJ_T0068492.1 MGP_BALBcJ_G0028909.1 mouse_genomes_project 4 131635932 131649835 + Pafah2 protein_coding processed_transcript MGP_BALBcJ_T0068493.1 MGP_BALBcJ_G0028909.1 mouse_genomes_project 4 131636166 131666268 + MGP_BALBcJ_P0068493 Pafah2 protein_coding protein_coding MGP_BALBcJ_T0068494.1 MGP_BALBcJ_G0028909.1 mouse_genomes_project 4 131641351 131643506 + MGP_BALBcJ_P0068494 Pafah2 protein_coding protein_coding MGP_BALBcJ_T0068495.1 MGP_BALBcJ_G0028909.1 mouse_genomes_project 4 131641409 131661341 + Pafah2 protein_coding processed_transcript MGP_BALBcJ_T0017996.1 MGP_BALBcJ_G0015475.1 mouse_genomes_project 4 21498083 21503906 - C230012O17Rik processed_transcript processed_transcript MGP_BALBcJ_T0017997.1 MGP_BALBcJ_G0015475.1 mouse_genomes_project 4 21499619 21504373 - C230012O17Rik processed_transcript processed_transcript MGP_BALBcJ_T0017998.1 MGP_BALBcJ_G0015475.1 mouse_genomes_project 4 21503661 21504739 - C230012O17Rik processed_transcript processed_transcript MGP_BALBcJ_T0101142.1 MGP_BALBcJ_G0039178.1 mouse_genomes_project 4 76199387 76199510 - Gm25836 snoRNA snoRNA MGP_BALBcJ_T0014737.1 MGP_BALBcJ_G0012834.1 mouse_genomes_project 4 121001644 121003041 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007783.1 MGP_BALBcJ_G0006358.1 mouse_genomes_project 4 12941941 12989332 + Gm11861 lincRNA lincRNA MGP_BALBcJ_T0069473.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150040657 150048545 - MGP_BALBcJ_P0069473 Zbtb48 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069474.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150040657 150048545 - MGP_BALBcJ_P0069474 Zbtb48 protein_coding protein_coding MGP_BALBcJ_T0069475.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150040659 150048555 - Zbtb48 protein_coding retained_intron MGP_BALBcJ_T0069476.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150040683 150041500 - Zbtb48 protein_coding processed_transcript MGP_BALBcJ_T0069477.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150041992 150042990 - Zbtb48 protein_coding processed_transcript MGP_BALBcJ_T0069478.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150042475 150047328 - MGP_BALBcJ_P0069478 Zbtb48 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069479.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150043369 150046931 - Zbtb48 protein_coding retained_intron MGP_BALBcJ_T0069480.1 MGP_BALBcJ_G0029149.1 mouse_genomes_project 4 150047361 150048521 - MGP_BALBcJ_P0069480 Zbtb48 protein_coding protein_coding MGP_BALBcJ_T0069289.1 MGP_BALBcJ_G0029115.1 mouse_genomes_project 4 147075171 147076905 - MGP_BALBcJ_P0069289 Cort protein_coding protein_coding MGP_BALBcJ_T0065053.1 MGP_BALBcJ_G0028125.1 mouse_genomes_project 4 37890183 37900449 - MGP_BALBcJ_P0065053 Nol6 protein_coding protein_coding MGP_BALBcJ_T0065054.1 MGP_BALBcJ_G0028125.1 mouse_genomes_project 4 37897087 37899056 - Nol6 protein_coding processed_transcript MGP_BALBcJ_T0065055.1 MGP_BALBcJ_G0028125.1 mouse_genomes_project 4 37897303 37899291 - Nol6 protein_coding processed_transcript MGP_BALBcJ_T0065056.1 MGP_BALBcJ_G0028125.1 mouse_genomes_project 4 37897635 37898511 - Nol6 protein_coding processed_transcript MGP_BALBcJ_T0101180.1 MGP_BALBcJ_G0039216.1 mouse_genomes_project 4 134348401 134348530 + Gm23834 snoRNA snoRNA MGP_BALBcJ_T0014372.1 MGP_BALBcJ_G0012469.1 mouse_genomes_project 4 2106190 2106662 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067505.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116814394 116953448 + Hivep3 protein_coding processed_transcript MGP_BALBcJ_T0067506.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116814394 116897199 + Hivep3 protein_coding processed_transcript MGP_BALBcJ_T0067507.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116814406 116817383 + MGP_BALBcJ_P0067507 Hivep3 protein_coding protein_coding MGP_BALBcJ_T0067508.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116814451 116952342 + Hivep3 protein_coding processed_transcript MGP_BALBcJ_T0067509.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116842048 116952811 + Hivep3 protein_coding processed_transcript MGP_BALBcJ_T0067510.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116896781 117074392 + Hivep3 protein_coding processed_transcript MGP_BALBcJ_T0067511.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116896805 116953448 + Hivep3 protein_coding processed_transcript MGP_BALBcJ_T0067512.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 116896945 117217000 + MGP_BALBcJ_P0067512 Hivep3 protein_coding protein_coding MGP_BALBcJ_T0067513.1 MGP_BALBcJ_G0028688.1 mouse_genomes_project 4 117176380 117213127 + MGP_BALBcJ_P0067513 Hivep3 protein_coding protein_coding MGP_BALBcJ_T0014763.1 MGP_BALBcJ_G0012860.1 mouse_genomes_project 4 131578674 131578935 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068424.1 MGP_BALBcJ_G0028893.1 mouse_genomes_project 4 131320082 131332468 - Cd52 protein_coding processed_transcript MGP_BALBcJ_T0068427.1 MGP_BALBcJ_G0028893.1 mouse_genomes_project 4 131330962 131332509 - MGP_BALBcJ_P0068427 Cd52 protein_coding protein_coding MGP_BALBcJ_T0068428.1 MGP_BALBcJ_G0028893.1 mouse_genomes_project 4 131331502 131332465 - Cd52 protein_coding processed_transcript MGP_BALBcJ_T0014690.1 MGP_BALBcJ_G0012787.1 mouse_genomes_project 4 107522685 107522953 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014517.1 MGP_BALBcJ_G0012614.1 mouse_genomes_project 4 45470948 45471313 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064718.1 MGP_BALBcJ_G0028036.1 mouse_genomes_project 4 11101829 11247488 - MGP_BALBcJ_P0064718 Lrrc69 protein_coding protein_coding MGP_BALBcJ_T0064719.1 MGP_BALBcJ_G0028036.1 mouse_genomes_project 4 11135965 11217053 - Lrrc69 protein_coding processed_transcript MGP_BALBcJ_T0064720.1 MGP_BALBcJ_G0028036.1 mouse_genomes_project 4 11135965 11247480 - MGP_BALBcJ_P0064720 Lrrc69 protein_coding protein_coding MGP_BALBcJ_T0064695.1 MGP_BALBcJ_G0028031.1 mouse_genomes_project 4 8565586 8573474 + MGP_BALBcJ_P0064695 protein_coding protein_coding MGP_BALBcJ_T0064696.1 MGP_BALBcJ_G0028031.1 mouse_genomes_project 4 8565588 8573795 + MGP_BALBcJ_P0064696 protein_coding protein_coding MGP_BALBcJ_T0014468.1 MGP_BALBcJ_G0012565.1 mouse_genomes_project 4 28687012 28689845 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010641.1 MGP_BALBcJ_G0008766.1 mouse_genomes_project 4 154141587 154141657 - Mir200b miRNA miRNA MGP_BALBcJ_T0068487.1 MGP_BALBcJ_G0028908.1 mouse_genomes_project 4 131599734 131616177 - MGP_BALBcJ_P0068487 Extl1 protein_coding protein_coding MGP_BALBcJ_T0068488.1 MGP_BALBcJ_G0028908.1 mouse_genomes_project 4 131604220 131626769 - Extl1 protein_coding processed_transcript MGP_BALBcJ_T0068489.1 MGP_BALBcJ_G0028908.1 mouse_genomes_project 4 131606356 131609068 - Extl1 protein_coding processed_transcript MGP_BALBcJ_T0004546.1 MGP_BALBcJ_G0003948.1 mouse_genomes_project 4 136567888 136573090 - Gm16287 antisense antisense MGP_BALBcJ_T0018007.1 MGP_BALBcJ_G0015481.1 mouse_genomes_project 4 38301641 38306768 + Gm12404 processed_transcript processed_transcript MGP_BALBcJ_T0067516.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117483598 117527021 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067517.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117483623 117604008 + MGP_BALBcJ_P0067517 Scmh1 protein_coding protein_coding MGP_BALBcJ_T0067518.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117483682 117535470 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067519.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117483697 117521246 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067520.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117483744 117535435 + MGP_BALBcJ_P0067520 Scmh1 protein_coding protein_coding MGP_BALBcJ_T0067521.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117519660 117604008 + MGP_BALBcJ_P0067521 Scmh1 protein_coding protein_coding MGP_BALBcJ_T0067522.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117525748 117603986 + MGP_BALBcJ_P0067522 Scmh1 protein_coding protein_coding MGP_BALBcJ_T0067523.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117534430 117603083 + MGP_BALBcJ_P0067523 Scmh1 protein_coding protein_coding MGP_BALBcJ_T0067524.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117576285 117604008 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067525.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117577814 117596480 + MGP_BALBcJ_P0067525 Scmh1 protein_coding protein_coding MGP_BALBcJ_T0067526.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117591548 117604008 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067527.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117591601 117603625 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067528.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117601652 117603044 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0067529.1 MGP_BALBcJ_G0028691.1 mouse_genomes_project 4 117602978 117604010 + Scmh1 protein_coding processed_transcript MGP_BALBcJ_T0068501.1 MGP_BALBcJ_G0028911.1 mouse_genomes_project 4 131736385 131748994 + MGP_BALBcJ_P0068501 Paqr7 protein_coding protein_coding MGP_BALBcJ_T0068502.1 MGP_BALBcJ_G0028911.1 mouse_genomes_project 4 131736663 131747387 + MGP_BALBcJ_P0068502 Paqr7 protein_coding protein_coding MGP_BALBcJ_T0068503.1 MGP_BALBcJ_G0028911.1 mouse_genomes_project 4 131736663 131747718 + MGP_BALBcJ_P0068503 Paqr7 protein_coding protein_coding MGP_BALBcJ_T0068504.1 MGP_BALBcJ_G0028911.1 mouse_genomes_project 4 131736669 131747447 + MGP_BALBcJ_P0068504 Paqr7 protein_coding protein_coding MGP_BALBcJ_T0068505.1 MGP_BALBcJ_G0028911.1 mouse_genomes_project 4 131736692 131749752 + MGP_BALBcJ_P0068505 Paqr7 protein_coding protein_coding MGP_BALBcJ_T0068506.1 MGP_BALBcJ_G0028911.1 mouse_genomes_project 4 131736729 131747167 + Paqr7 protein_coding processed_transcript MGP_BALBcJ_T0014588.1 MGP_BALBcJ_G0012685.1 mouse_genomes_project 4 72228443 72229623 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069688.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060651 153088608 - MGP_BALBcJ_P0069688 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069689.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060662 153073808 - Plch2 protein_coding retained_intron MGP_BALBcJ_T0069690.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060903 153084631 - MGP_BALBcJ_P0069690 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069691.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060903 153067354 - MGP_BALBcJ_P0069691 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069692.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060903 153097082 - MGP_BALBcJ_P0069692 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069693.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060909 153070184 - Plch2 protein_coding retained_intron MGP_BALBcJ_T0069694.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153060913 153088608 - MGP_BALBcJ_P0069694 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069695.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153061198 153120726 - MGP_BALBcJ_P0069695 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069696.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153063235 153132333 - MGP_BALBcJ_P0069696 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069697.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153075787 153088608 - MGP_BALBcJ_P0069697 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069698.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153084694 153134378 - MGP_BALBcJ_P0069698 Plch2 protein_coding protein_coding MGP_BALBcJ_T0069699.1 MGP_BALBcJ_G0029186.1 mouse_genomes_project 4 153086700 153097078 - MGP_BALBcJ_P0069699 Plch2 protein_coding protein_coding MGP_BALBcJ_T0007776.1 MGP_BALBcJ_G0006351.1 mouse_genomes_project 4 7771337 7792385 + Gm26663 lincRNA lincRNA MGP_BALBcJ_T0065098.1 MGP_BALBcJ_G0028135.1 mouse_genomes_project 4 38350779 38418934 + MGP_BALBcJ_P0065098 Dnaic1 protein_coding protein_coding MGP_BALBcJ_T0065099.1 MGP_BALBcJ_G0028135.1 mouse_genomes_project 4 38412418 38418934 + Dnaic1 protein_coding retained_intron MGP_BALBcJ_T0065100.1 MGP_BALBcJ_G0028135.1 mouse_genomes_project 4 38414123 38418934 + MGP_BALBcJ_P0065100 Dnaic1 protein_coding protein_coding MGP_BALBcJ_T0007830.1 MGP_BALBcJ_G0006399.1 mouse_genomes_project 4 53025442 53029310 - 2310081O03Rik lincRNA lincRNA MGP_BALBcJ_T0067793.1 MGP_BALBcJ_G0028763.1 mouse_genomes_project 4 123649873 123683528 - MGP_BALBcJ_P0067793 Ago1 protein_coding protein_coding MGP_BALBcJ_T0067794.1 MGP_BALBcJ_G0028763.1 mouse_genomes_project 4 123653182 123676730 - MGP_BALBcJ_P0067794 Ago1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067795.1 MGP_BALBcJ_G0028763.1 mouse_genomes_project 4 123654364 123674155 - MGP_BALBcJ_P0067795 Ago1 protein_coding protein_coding MGP_BALBcJ_T0067796.1 MGP_BALBcJ_G0028763.1 mouse_genomes_project 4 123657461 123658223 - Ago1 protein_coding retained_intron MGP_BALBcJ_T0067797.1 MGP_BALBcJ_G0028763.1 mouse_genomes_project 4 123674262 123675073 - Ago1 protein_coding retained_intron MGP_BALBcJ_T0101704.1 MGP_BALBcJ_G0039683.1 mouse_genomes_project 4 83821996 83835498 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0067328.1 MGP_BALBcJ_G0028641.1 mouse_genomes_project 4 114944687 114948078 - MGP_BALBcJ_P0067328 Dph2 protein_coding protein_coding MGP_BALBcJ_T0067329.1 MGP_BALBcJ_G0028641.1 mouse_genomes_project 4 114944951 114948066 - Dph2 protein_coding retained_intron MGP_BALBcJ_T0067330.1 MGP_BALBcJ_G0028641.1 mouse_genomes_project 4 114944960 114948069 - MGP_BALBcJ_P0067330 Dph2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067331.1 MGP_BALBcJ_G0028641.1 mouse_genomes_project 4 114947122 114948032 - Dph2 protein_coding retained_intron MGP_BALBcJ_T0014631.1 MGP_BALBcJ_G0012728.1 mouse_genomes_project 4 88849217 88850240 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014692.1 MGP_BALBcJ_G0012789.1 mouse_genomes_project 4 108311457 108312505 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007769.1 MGP_BALBcJ_G0006348.1 mouse_genomes_project 4 5731041 5733634 - Gm26548 lincRNA lincRNA MGP_BALBcJ_T0065663.1 MGP_BALBcJ_G0028254.1 mouse_genomes_project 4 45332817 45354695 + MGP_BALBcJ_P0065663 Msantd3 protein_coding protein_coding MGP_BALBcJ_T0065664.1 MGP_BALBcJ_G0028254.1 mouse_genomes_project 4 45332961 45354354 + MGP_BALBcJ_P0065664 Msantd3 protein_coding protein_coding MGP_BALBcJ_T0065665.1 MGP_BALBcJ_G0028254.1 mouse_genomes_project 4 45352723 45354695 + Msantd3 protein_coding processed_transcript MGP_BALBcJ_T0069106.1 MGP_BALBcJ_G0029065.1 mouse_genomes_project 4 141719503 141722997 - MGP_BALBcJ_P0069106 Gm13088 protein_coding protein_coding MGP_BALBcJ_T0098941.1 MGP_BALBcJ_G0036988.1 mouse_genomes_project 4 55960845 55963240 - Gm12594 sense_intronic sense_intronic MGP_BALBcJ_T0004508.1 MGP_BALBcJ_G0003919.1 mouse_genomes_project 4 120816759 120819622 + Gm12925 antisense antisense MGP_BALBcJ_T0004509.1 MGP_BALBcJ_G0003919.1 mouse_genomes_project 4 120818332 120822103 + Gm12925 antisense antisense MGP_BALBcJ_T0004510.1 MGP_BALBcJ_G0003919.1 mouse_genomes_project 4 120818494 120822110 + Gm12925 antisense antisense MGP_BALBcJ_T0065635.1 MGP_BALBcJ_G0028248.1 mouse_genomes_project 4 44256045 44264553 + MGP_BALBcJ_P0065635 protein_coding protein_coding MGP_BALBcJ_T0065636.1 MGP_BALBcJ_G0028248.1 mouse_genomes_project 4 44256151 44264439 + MGP_BALBcJ_P0065636 protein_coding protein_coding MGP_BALBcJ_T0065637.1 MGP_BALBcJ_G0028248.1 mouse_genomes_project 4 44256195 44264405 + MGP_BALBcJ_P0065637 protein_coding protein_coding MGP_BALBcJ_T0065638.1 MGP_BALBcJ_G0028248.1 mouse_genomes_project 4 44256335 44262102 + protein_coding retained_intron MGP_BALBcJ_T0007910.1 MGP_BALBcJ_G0006464.1 mouse_genomes_project 4 116123193 116137139 - Gm12866 lincRNA lincRNA MGP_BALBcJ_T0102517.1 MGP_BALBcJ_G0040333.1 mouse_genomes_project 4 85609638 85611030 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0069659.1 MGP_BALBcJ_G0029179.1 mouse_genomes_project 4 152748158 152749593 - MGP_BALBcJ_P0069659 Actrt2 protein_coding protein_coding MGP_BALBcJ_T0068090.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127347724 127401313 + MGP_BALBcJ_P0068090 Col16a1 protein_coding protein_coding MGP_BALBcJ_T0068091.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127347759 127349601 + MGP_BALBcJ_P0068091 Col16a1 protein_coding protein_coding MGP_BALBcJ_T0068092.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127347769 127394988 + Col16a1 protein_coding processed_transcript MGP_BALBcJ_T0068093.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127347793 127380675 + Col16a1 protein_coding processed_transcript MGP_BALBcJ_T0068094.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127347829 127351730 + MGP_BALBcJ_P0068094 Col16a1 protein_coding protein_coding MGP_BALBcJ_T0068095.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127347846 127401319 + MGP_BALBcJ_P0068095 Col16a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068096.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127354855 127358416 + MGP_BALBcJ_P0068096 Col16a1 protein_coding protein_coding MGP_BALBcJ_T0068097.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127354900 127355862 + Col16a1 protein_coding retained_intron MGP_BALBcJ_T0068098.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127355824 127401313 + MGP_BALBcJ_P0068098 Col16a1 protein_coding protein_coding MGP_BALBcJ_T0068099.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127369121 127381773 + Col16a1 protein_coding processed_transcript MGP_BALBcJ_T0068100.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127377371 127380482 + Col16a1 protein_coding processed_transcript MGP_BALBcJ_T0068101.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127379296 127380894 + Col16a1 protein_coding processed_transcript MGP_BALBcJ_T0068102.1 MGP_BALBcJ_G0028824.1 mouse_genomes_project 4 127399639 127401312 + Col16a1 protein_coding processed_transcript MGP_BALBcJ_T0004404.1 MGP_BALBcJ_G0003839.1 mouse_genomes_project 4 5899887 5914951 - Gm11817 antisense antisense MGP_BALBcJ_T0069084.1 MGP_BALBcJ_G0029051.1 mouse_genomes_project 4 140853718 140875249 + MGP_BALBcJ_P0069084 Lrrc38 protein_coding protein_coding MGP_BALBcJ_T0014585.1 MGP_BALBcJ_G0012682.1 mouse_genomes_project 4 71987962 71988163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101175.1 MGP_BALBcJ_G0039211.1 mouse_genomes_project 4 129476065 129476195 + Snora61 snoRNA snoRNA MGP_BALBcJ_T0066729.1 MGP_BALBcJ_G0028522.1 mouse_genomes_project 4 104442267 104443713 + Glis1 protein_coding processed_transcript MGP_BALBcJ_T0066730.1 MGP_BALBcJ_G0028522.1 mouse_genomes_project 4 104442293 104563641 + MGP_BALBcJ_P0066730 Glis1 protein_coding protein_coding MGP_BALBcJ_T0066731.1 MGP_BALBcJ_G0028522.1 mouse_genomes_project 4 104442395 104635164 + MGP_BALBcJ_P0066731 Glis1 protein_coding protein_coding MGP_BALBcJ_T0066732.1 MGP_BALBcJ_G0028522.1 mouse_genomes_project 4 104446674 104635164 + MGP_BALBcJ_P0066732 Glis1 protein_coding protein_coding MGP_BALBcJ_T0066733.1 MGP_BALBcJ_G0028522.1 mouse_genomes_project 4 104580771 104627558 + Glis1 protein_coding processed_transcript MGP_BALBcJ_T0066734.1 MGP_BALBcJ_G0028522.1 mouse_genomes_project 4 104615074 104632482 + Glis1 protein_coding processed_transcript MGP_BALBcJ_T0068345.1 MGP_BALBcJ_G0028875.1 mouse_genomes_project 4 130564383 130617991 + MGP_BALBcJ_P0068345 Slc9a1 protein_coding protein_coding MGP_BALBcJ_T0068346.1 MGP_BALBcJ_G0028875.1 mouse_genomes_project 4 130565321 130606585 + Slc9a1 protein_coding processed_transcript MGP_BALBcJ_T0068347.1 MGP_BALBcJ_G0028875.1 mouse_genomes_project 4 130610757 130614867 + Slc9a1 protein_coding processed_transcript MGP_BALBcJ_T0068348.1 MGP_BALBcJ_G0028875.1 mouse_genomes_project 4 130613798 130614483 + Slc9a1 protein_coding processed_transcript MGP_BALBcJ_T0068349.1 MGP_BALBcJ_G0028875.1 mouse_genomes_project 4 130614289 130616632 + Slc9a1 protein_coding processed_transcript MGP_BALBcJ_T0068289.1 MGP_BALBcJ_G0028863.1 mouse_genomes_project 4 130012276 130029500 - MGP_BALBcJ_P0068289 Ppp1r8 protein_coding protein_coding MGP_BALBcJ_T0068290.1 MGP_BALBcJ_G0028863.1 mouse_genomes_project 4 130013174 130029454 - MGP_BALBcJ_P0068290 Ppp1r8 protein_coding protein_coding MGP_BALBcJ_T0068291.1 MGP_BALBcJ_G0028863.1 mouse_genomes_project 4 130014315 130019276 - Ppp1r8 protein_coding processed_transcript MGP_BALBcJ_T0068292.1 MGP_BALBcJ_G0028863.1 mouse_genomes_project 4 130016333 130029455 - Ppp1r8 protein_coding processed_transcript MGP_BALBcJ_T0068293.1 MGP_BALBcJ_G0028863.1 mouse_genomes_project 4 130020992 130029465 - Ppp1r8 protein_coding processed_transcript MGP_BALBcJ_T0064697.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8652609 8686858 - MGP_BALBcJ_P0064697 Fam92a protein_coding protein_coding MGP_BALBcJ_T0064698.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8652896 8686858 - MGP_BALBcJ_P0064698 Fam92a protein_coding protein_coding MGP_BALBcJ_T0064699.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8652897 8686838 - MGP_BALBcJ_P0064699 Fam92a protein_coding protein_coding MGP_BALBcJ_T0064700.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8653030 8669014 - Fam92a protein_coding processed_transcript MGP_BALBcJ_T0064701.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8663600 8686011 - MGP_BALBcJ_P0064701 Fam92a protein_coding protein_coding MGP_BALBcJ_T0064702.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8678963 8686714 - MGP_BALBcJ_P0064702 Fam92a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064703.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8680185 8686838 - Fam92a protein_coding retained_intron MGP_BALBcJ_T0064704.1 MGP_BALBcJ_G0028032.1 mouse_genomes_project 4 8680452 8686577 - Fam92a protein_coding retained_intron MGP_BALBcJ_T0018030.1 MGP_BALBcJ_G0015498.1 mouse_genomes_project 4 92435095 92457770 - Gm830 processed_transcript processed_transcript MGP_BALBcJ_T0004512.1 MGP_BALBcJ_G0003921.1 mouse_genomes_project 4 121070882 121083312 - Gm12905 antisense antisense MGP_BALBcJ_T0004513.1 MGP_BALBcJ_G0003921.1 mouse_genomes_project 4 121071050 121071329 - Gm12905 antisense antisense MGP_BALBcJ_T0068217.1 MGP_BALBcJ_G0028848.1 mouse_genomes_project 4 129440053 129461467 + MGP_BALBcJ_P0068217 Taf12 protein_coding protein_coding MGP_BALBcJ_T0068218.1 MGP_BALBcJ_G0028848.1 mouse_genomes_project 4 129440091 129442467 + Taf12 protein_coding processed_transcript MGP_BALBcJ_T0068219.1 MGP_BALBcJ_G0028848.1 mouse_genomes_project 4 129440094 129458350 + MGP_BALBcJ_P0068219 Taf12 protein_coding protein_coding MGP_BALBcJ_T0069774.1 MGP_BALBcJ_G0029198.1 mouse_genomes_project 4 153694403 153716755 + MGP_BALBcJ_P0069774 Slc35e2 protein_coding protein_coding MGP_BALBcJ_T0069775.1 MGP_BALBcJ_G0029198.1 mouse_genomes_project 4 153694598 153713324 + MGP_BALBcJ_P0069775 Slc35e2 protein_coding protein_coding MGP_BALBcJ_T0069776.1 MGP_BALBcJ_G0029198.1 mouse_genomes_project 4 153694930 153712553 + MGP_BALBcJ_P0069776 Slc35e2 protein_coding protein_coding MGP_BALBcJ_T0069777.1 MGP_BALBcJ_G0029198.1 mouse_genomes_project 4 153703225 153712430 + Slc35e2 protein_coding processed_transcript MGP_BALBcJ_T0014659.1 MGP_BALBcJ_G0012756.1 mouse_genomes_project 4 98291490 98291782 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066508.1 MGP_BALBcJ_G0028478.1 mouse_genomes_project 4 98879061 98882135 + MGP_BALBcJ_P0066508 protein_coding protein_coding MGP_BALBcJ_T0069436.1 MGP_BALBcJ_G0029142.1 mouse_genomes_project 4 149008146 149049221 - MGP_BALBcJ_P0069436 Per3 protein_coding protein_coding MGP_BALBcJ_T0069437.1 MGP_BALBcJ_G0029142.1 mouse_genomes_project 4 149008280 149020707 - Per3 protein_coding processed_transcript MGP_BALBcJ_T0069438.1 MGP_BALBcJ_G0029142.1 mouse_genomes_project 4 149015936 149036058 - Per3 protein_coding retained_intron MGP_BALBcJ_T0069439.1 MGP_BALBcJ_G0029142.1 mouse_genomes_project 4 149015936 149049221 - MGP_BALBcJ_P0069439 Per3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069440.1 MGP_BALBcJ_G0029142.1 mouse_genomes_project 4 149028750 149049221 - Per3 protein_coding retained_intron MGP_BALBcJ_T0099844.1 MGP_BALBcJ_G0037880.1 mouse_genomes_project 4 82978424 82978525 - Gm25811 snRNA snRNA MGP_BALBcJ_T0014630.1 MGP_BALBcJ_G0012727.1 mouse_genomes_project 4 88749239 88750571 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007909.1 MGP_BALBcJ_G0006463.1 mouse_genomes_project 4 116067321 116068147 - Gm12862 lincRNA lincRNA MGP_BALBcJ_T0065101.1 MGP_BALBcJ_G0028136.1 mouse_genomes_project 4 38418919 38421110 - MGP_BALBcJ_P0065101 Enho protein_coding protein_coding MGP_BALBcJ_T0067412.1 MGP_BALBcJ_G0028666.1 mouse_genomes_project 4 115973693 115974635 - MGP_BALBcJ_P0067412 Olfr1329 protein_coding protein_coding MGP_BALBcJ_T0000337.1 MGP_BALBcJ_G0000278.1 mouse_genomes_project 4 76988417 76988480 + mt-Tt Mt_tRNA Mt_tRNA MGP_BALBcJ_T0102521.1 MGP_BALBcJ_G0040337.1 mouse_genomes_project 4 93108506 93108712 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0068047.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126910719 126925479 - MGP_BALBcJ_P0068047 Txlna protein_coding protein_coding MGP_BALBcJ_T0068048.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126910724 126925056 - Txlna protein_coding retained_intron MGP_BALBcJ_T0068049.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126910724 126925219 - MGP_BALBcJ_P0068049 Txlna protein_coding protein_coding MGP_BALBcJ_T0068050.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126916808 126925479 - MGP_BALBcJ_P0068050 Txlna protein_coding protein_coding MGP_BALBcJ_T0068051.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126919023 126925392 - MGP_BALBcJ_P0068051 Txlna protein_coding protein_coding MGP_BALBcJ_T0068052.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126919039 126925373 - MGP_BALBcJ_P0068052 Txlna protein_coding protein_coding MGP_BALBcJ_T0068053.1 MGP_BALBcJ_G0028817.1 mouse_genomes_project 4 126923877 126925374 - MGP_BALBcJ_P0068053 Txlna protein_coding protein_coding MGP_BALBcJ_T0067024.1 MGP_BALBcJ_G0028578.1 mouse_genomes_project 4 112099512 112126551 - MGP_BALBcJ_P0067024 Cyp4x1 protein_coding protein_coding MGP_BALBcJ_T0067613.1 MGP_BALBcJ_G0028720.1 mouse_genomes_project 4 120407756 120431455 + Pabpc4 protein_coding processed_transcript MGP_BALBcJ_T0067614.1 MGP_BALBcJ_G0028720.1 mouse_genomes_project 4 120428307 120443298 + MGP_BALBcJ_P0067614 Pabpc4 protein_coding protein_coding MGP_BALBcJ_T0067615.1 MGP_BALBcJ_G0028720.1 mouse_genomes_project 4 120439628 120443223 + Pabpc4 protein_coding processed_transcript MGP_BALBcJ_T0067616.1 MGP_BALBcJ_G0028720.1 mouse_genomes_project 4 120442396 120444049 + Pabpc4 protein_coding retained_intron MGP_BALBcJ_T0068463.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481089 131482501 + MGP_BALBcJ_P0068463 E130218I03Rik protein_coding protein_coding MGP_BALBcJ_T0068464.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481190 131483301 + MGP_BALBcJ_P0068464 E130218I03Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068465.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481190 131483297 + MGP_BALBcJ_P0068465 E130218I03Rik protein_coding protein_coding MGP_BALBcJ_T0068466.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481203 131482417 + MGP_BALBcJ_P0068466 E130218I03Rik protein_coding protein_coding MGP_BALBcJ_T0068467.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481203 131482740 + MGP_BALBcJ_P0068467 E130218I03Rik protein_coding protein_coding MGP_BALBcJ_T0068468.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481204 131482980 + MGP_BALBcJ_P0068468 E130218I03Rik protein_coding protein_coding MGP_BALBcJ_T0068469.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481205 131482947 + MGP_BALBcJ_P0068469 E130218I03Rik protein_coding protein_coding MGP_BALBcJ_T0068470.1 MGP_BALBcJ_G0028901.1 mouse_genomes_project 4 131481410 131482705 + E130218I03Rik protein_coding processed_transcript MGP_BALBcJ_T0067016.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112076339 112081527 + MGP_BALBcJ_P0067016 Pdzk1ip1 protein_coding protein_coding MGP_BALBcJ_T0067017.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112076339 112081527 + MGP_BALBcJ_P0067017 Pdzk1ip1 protein_coding protein_coding MGP_BALBcJ_T0067018.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112076354 112081532 + MGP_BALBcJ_P0067018 Pdzk1ip1 protein_coding protein_coding MGP_BALBcJ_T0067019.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112076354 112081532 + MGP_BALBcJ_P0067019 Pdzk1ip1 protein_coding protein_coding MGP_BALBcJ_T0067020.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112076674 112078975 + Pdzk1ip1 protein_coding processed_transcript MGP_BALBcJ_T0067021.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112077815 112081497 + Pdzk1ip1 protein_coding processed_transcript MGP_BALBcJ_T0067022.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112077882 112078860 + Pdzk1ip1 protein_coding processed_transcript MGP_BALBcJ_T0067023.1 MGP_BALBcJ_G0028577.1 mouse_genomes_project 4 112078560 112081497 + Pdzk1ip1 protein_coding processed_transcript MGP_BALBcJ_T0069893.1 MGP_BALBcJ_G0029221.1 mouse_genomes_project 4 154043418 154047701 + MGP_BALBcJ_P0069893 Fam132a protein_coding protein_coding MGP_BALBcJ_T0069894.1 MGP_BALBcJ_G0029221.1 mouse_genomes_project 4 154045644 154046266 + Fam132a protein_coding processed_transcript MGP_BALBcJ_T0069895.1 MGP_BALBcJ_G0029221.1 mouse_genomes_project 4 154046180 154047693 + Fam132a protein_coding processed_transcript MGP_BALBcJ_T0014668.1 MGP_BALBcJ_G0012765.1 mouse_genomes_project 4 100943719 100944702 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004408.1 MGP_BALBcJ_G0003843.1 mouse_genomes_project 4 11389196 11417511 + Gm11837 antisense antisense MGP_BALBcJ_T0004409.1 MGP_BALBcJ_G0003843.1 mouse_genomes_project 4 11390255 11417648 + Gm11837 antisense antisense MGP_BALBcJ_T0004410.1 MGP_BALBcJ_G0003843.1 mouse_genomes_project 4 11390270 11417523 + Gm11837 antisense antisense MGP_BALBcJ_T0099853.1 MGP_BALBcJ_G0037889.1 mouse_genomes_project 4 98054312 98054375 - Gm22100 snRNA snRNA MGP_BALBcJ_T0011537.1 MGP_BALBcJ_G0009662.1 mouse_genomes_project 4 16047505 16047795 - Gm25655 misc_RNA misc_RNA MGP_BALBcJ_T0067531.1 MGP_BALBcJ_G0028693.1 mouse_genomes_project 4 117613211 117643443 - MGP_BALBcJ_P0067531 Ctps protein_coding protein_coding MGP_BALBcJ_T0067532.1 MGP_BALBcJ_G0028693.1 mouse_genomes_project 4 117615254 117618411 - Ctps protein_coding processed_transcript MGP_BALBcJ_T0067533.1 MGP_BALBcJ_G0028693.1 mouse_genomes_project 4 117615312 117621445 - Ctps protein_coding processed_transcript MGP_BALBcJ_T0065713.1 MGP_BALBcJ_G0028272.1 mouse_genomes_project 4 49635252 49636212 + MGP_BALBcJ_P0065713 Olfr275 protein_coding protein_coding MGP_BALBcJ_T0064992.1 MGP_BALBcJ_G0028109.1 mouse_genomes_project 4 36220312 36221794 + MGP_BALBcJ_P0064992 1700009N14Rik protein_coding protein_coding MGP_BALBcJ_T0065102.1 MGP_BALBcJ_G0028137.1 mouse_genomes_project 4 38439095 38497569 - MGP_BALBcJ_P0065102 Cntfr protein_coding protein_coding MGP_BALBcJ_T0065103.1 MGP_BALBcJ_G0028137.1 mouse_genomes_project 4 38439095 38499168 - MGP_BALBcJ_P0065103 Cntfr protein_coding protein_coding MGP_BALBcJ_T0065104.1 MGP_BALBcJ_G0028137.1 mouse_genomes_project 4 38445263 38446031 - Cntfr protein_coding processed_transcript MGP_BALBcJ_T0065105.1 MGP_BALBcJ_G0028137.1 mouse_genomes_project 4 38452289 38497572 - MGP_BALBcJ_P0065105 Cntfr protein_coding protein_coding MGP_BALBcJ_T0065106.1 MGP_BALBcJ_G0028137.1 mouse_genomes_project 4 38452289 38499227 - MGP_BALBcJ_P0065106 Cntfr protein_coding protein_coding MGP_BALBcJ_T0065107.1 MGP_BALBcJ_G0028137.1 mouse_genomes_project 4 38453597 38498062 - MGP_BALBcJ_P0065107 Cntfr protein_coding protein_coding MGP_BALBcJ_T0069029.1 MGP_BALBcJ_G0029035.1 mouse_genomes_project 4 139082329 139087511 - MGP_BALBcJ_P0069029 Tmem82 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069030.1 MGP_BALBcJ_G0029035.1 mouse_genomes_project 4 139083189 139087164 - MGP_BALBcJ_P0069030 Tmem82 protein_coding protein_coding MGP_BALBcJ_T0069031.1 MGP_BALBcJ_G0029035.1 mouse_genomes_project 4 139083193 139086907 - Tmem82 protein_coding retained_intron MGP_BALBcJ_T0067155.1 MGP_BALBcJ_G0028610.1 mouse_genomes_project 4 113620743 113624291 + Ccdc17 protein_coding processed_transcript MGP_BALBcJ_T0067156.1 MGP_BALBcJ_G0028610.1 mouse_genomes_project 4 113620819 113624356 + MGP_BALBcJ_P0067156 Ccdc17 protein_coding protein_coding MGP_BALBcJ_T0067157.1 MGP_BALBcJ_G0028610.1 mouse_genomes_project 4 113620892 113622290 + Ccdc17 protein_coding processed_transcript MGP_BALBcJ_T0067158.1 MGP_BALBcJ_G0028610.1 mouse_genomes_project 4 113621849 113624312 + Ccdc17 protein_coding processed_transcript MGP_BALBcJ_T0067159.1 MGP_BALBcJ_G0028610.1 mouse_genomes_project 4 113622581 113623254 + Ccdc17 protein_coding processed_transcript MGP_BALBcJ_T0014633.1 MGP_BALBcJ_G0012730.1 mouse_genomes_project 4 90007026 90007516 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010624.1 MGP_BALBcJ_G0008749.1 mouse_genomes_project 4 135532114 135532198 + Mir6399 miRNA miRNA MGP_BALBcJ_T0069009.1 MGP_BALBcJ_G0029033.1 mouse_genomes_project 4 138929965 139006364 - MGP_BALBcJ_P0069009 Spen protein_coding protein_coding MGP_BALBcJ_T0069010.1 MGP_BALBcJ_G0029033.1 mouse_genomes_project 4 138929965 139006216 - MGP_BALBcJ_P0069010 Spen protein_coding protein_coding MGP_BALBcJ_T0069011.1 MGP_BALBcJ_G0029033.1 mouse_genomes_project 4 138930530 138933559 - Spen protein_coding processed_transcript MGP_BALBcJ_T0069012.1 MGP_BALBcJ_G0029033.1 mouse_genomes_project 4 138958040 138979259 - Spen protein_coding processed_transcript MGP_BALBcJ_T0069013.1 MGP_BALBcJ_G0029033.1 mouse_genomes_project 4 138984763 139006020 - Spen protein_coding processed_transcript MGP_BALBcJ_T0064749.1 MGP_BALBcJ_G0028048.1 mouse_genomes_project 4 15800408 16043638 + MGP_BALBcJ_P0064749 Cngb3 protein_coding protein_coding MGP_BALBcJ_T0067437.1 MGP_BALBcJ_G0028674.1 mouse_genomes_project 4 116272765 116303673 - AU022252 protein_coding processed_transcript MGP_BALBcJ_T0067439.1 MGP_BALBcJ_G0028674.1 mouse_genomes_project 4 116290150 116303677 - MGP_BALBcJ_P0067439 AU022252 protein_coding protein_coding MGP_BALBcJ_T0067440.1 MGP_BALBcJ_G0028674.1 mouse_genomes_project 4 116297164 116303643 - AU022252 protein_coding processed_transcript MGP_BALBcJ_T0067441.1 MGP_BALBcJ_G0028674.1 mouse_genomes_project 4 116297254 116303650 - AU022252 protein_coding processed_transcript MGP_BALBcJ_T0066154.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81209215 81617817 - MGP_BALBcJ_P0066154 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066155.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81209349 81617850 - MGP_BALBcJ_P0066155 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066156.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81209472 81618058 - MGP_BALBcJ_P0066156 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066157.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81209501 81226213 - MGP_BALBcJ_P0066157 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066158.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81209729 81617869 - MGP_BALBcJ_P0066158 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066159.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81210278 81226386 - MGP_BALBcJ_P0066159 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066160.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81210364 81226602 - MGP_BALBcJ_P0066160 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066161.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81210563 81226324 - MGP_BALBcJ_P0066161 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066162.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81210563 81226324 - MGP_BALBcJ_P0066162 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066163.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81227669 81617779 - MGP_BALBcJ_P0066163 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066164.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81227669 81617779 - MGP_BALBcJ_P0066164 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066165.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81227693 81445135 - Bnc2 protein_coding processed_transcript MGP_BALBcJ_T0066166.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81228032 81617810 - MGP_BALBcJ_P0066166 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066167.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81228059 81617780 - MGP_BALBcJ_P0066167 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066168.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81228090 81471586 - Bnc2 protein_coding processed_transcript MGP_BALBcJ_T0066169.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81324044 81617782 - Bnc2 protein_coding retained_intron MGP_BALBcJ_T0066170.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81326283 81617780 - MGP_BALBcJ_P0066170 Bnc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066171.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81326315 81484833 - Bnc2 protein_coding processed_transcript MGP_BALBcJ_T0066172.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81326408 81617861 - MGP_BALBcJ_P0066172 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066173.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81346795 81484504 - MGP_BALBcJ_P0066173 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066174.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81346820 81461701 - Bnc2 protein_coding processed_transcript MGP_BALBcJ_T0066175.1 MGP_BALBcJ_G0028387.1 mouse_genomes_project 4 81484425 81617782 - MGP_BALBcJ_P0066175 Bnc2 protein_coding protein_coding MGP_BALBcJ_T0066923.1 MGP_BALBcJ_G0028557.1 mouse_genomes_project 4 106996592 107002227 + MGP_BALBcJ_P0066923 Dmrta2 protein_coding protein_coding MGP_BALBcJ_T0014501.1 MGP_BALBcJ_G0012598.1 mouse_genomes_project 4 37481452 37481849 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066373.1 MGP_BALBcJ_G0028449.1 mouse_genomes_project 4 94154598 94154925 - MGP_BALBcJ_P0066373 Gm10192 protein_coding protein_coding MGP_BALBcJ_T0065853.1 MGP_BALBcJ_G0028310.1 mouse_genomes_project 4 55823962 55848697 + MGP_BALBcJ_P0065853 Dnajc25 protein_coding protein_coding MGP_BALBcJ_T0065854.1 MGP_BALBcJ_G0028310.1 mouse_genomes_project 4 55831822 55852457 + MGP_BALBcJ_P0065854 Dnajc25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065855.1 MGP_BALBcJ_G0028310.1 mouse_genomes_project 4 55831833 55852457 + MGP_BALBcJ_P0065855 Dnajc25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065857.1 MGP_BALBcJ_G0028310.1 mouse_genomes_project 4 55831871 55851168 + MGP_BALBcJ_P0065857 Dnajc25 protein_coding protein_coding MGP_BALBcJ_T0014542.1 MGP_BALBcJ_G0012639.1 mouse_genomes_project 4 51958355 51958964 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099816.1 MGP_BALBcJ_G0037852.1 mouse_genomes_project 4 22464702 22464808 + Gm24965 snRNA snRNA MGP_BALBcJ_T0014489.1 MGP_BALBcJ_G0012586.1 mouse_genomes_project 4 33978754 33979222 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069096.1 MGP_BALBcJ_G0029057.1 mouse_genomes_project 4 141249267 141261310 + MGP_BALBcJ_P0069096 protein_coding protein_coding MGP_BALBcJ_T0014415.1 MGP_BALBcJ_G0012512.1 mouse_genomes_project 4 13187225 13187884 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069935.1 MGP_BALBcJ_G0029229.1 mouse_genomes_project 4 154280469 154281871 - MGP_BALBcJ_P0069935 Isg15 protein_coding protein_coding MGP_BALBcJ_T0018075.1 MGP_BALBcJ_G0015524.1 mouse_genomes_project 4 153038327 153039236 - Gm20421 processed_transcript processed_transcript MGP_BALBcJ_T0064538.1 MGP_BALBcJ_G0027999.1 mouse_genomes_project 4 573341 600548 - MGP_BALBcJ_P0064538 Sdr16c6 protein_coding protein_coding MGP_BALBcJ_T0064539.1 MGP_BALBcJ_G0027999.1 mouse_genomes_project 4 573343 601139 - MGP_BALBcJ_P0064539 Sdr16c6 protein_coding protein_coding MGP_BALBcJ_T0068480.1 MGP_BALBcJ_G0028905.1 mouse_genomes_project 4 131552661 131572842 + MGP_BALBcJ_P0068480 Trim63 protein_coding protein_coding MGP_BALBcJ_T0068481.1 MGP_BALBcJ_G0028905.1 mouse_genomes_project 4 131552663 131572820 + MGP_BALBcJ_P0068481 Trim63 protein_coding protein_coding MGP_BALBcJ_T0068482.1 MGP_BALBcJ_G0028905.1 mouse_genomes_project 4 131552753 131554919 + Trim63 protein_coding retained_intron MGP_BALBcJ_T0068483.1 MGP_BALBcJ_G0028905.1 mouse_genomes_project 4 131557529 131572839 + Trim63 protein_coding processed_transcript MGP_BALBcJ_T0004570.1 MGP_BALBcJ_G0003966.1 mouse_genomes_project 4 146862955 146863770 - Gm15969 antisense antisense MGP_BALBcJ_T0011562.1 MGP_BALBcJ_G0009687.1 mouse_genomes_project 4 118226227 118226546 + Gm22982 misc_RNA misc_RNA MGP_BALBcJ_T0010569.1 MGP_BALBcJ_G0008694.1 mouse_genomes_project 4 37488103 37488182 + Mir207 miRNA miRNA MGP_BALBcJ_T0069441.1 MGP_BALBcJ_G0029143.1 mouse_genomes_project 4 149051855 149063399 - MGP_BALBcJ_P0069441 Vamp3 protein_coding protein_coding MGP_BALBcJ_T0069442.1 MGP_BALBcJ_G0029143.1 mouse_genomes_project 4 149054964 149063392 - Vamp3 protein_coding retained_intron MGP_BALBcJ_T0069443.1 MGP_BALBcJ_G0029143.1 mouse_genomes_project 4 149061356 149063409 - Vamp3 protein_coding retained_intron MGP_BALBcJ_T0067848.1 MGP_BALBcJ_G0028774.1 mouse_genomes_project 4 124298325 124346090 + MGP_BALBcJ_P0067848 Zmym6 protein_coding protein_coding MGP_BALBcJ_T0067849.1 MGP_BALBcJ_G0028774.1 mouse_genomes_project 4 124298339 124346092 + MGP_BALBcJ_P0067849 Zmym6 protein_coding protein_coding MGP_BALBcJ_T0067850.1 MGP_BALBcJ_G0028774.1 mouse_genomes_project 4 124298384 124329684 + Zmym6 protein_coding processed_transcript MGP_BALBcJ_T0067851.1 MGP_BALBcJ_G0028774.1 mouse_genomes_project 4 124299233 124309196 + Zmym6 protein_coding processed_transcript MGP_BALBcJ_T0067852.1 MGP_BALBcJ_G0028774.1 mouse_genomes_project 4 124307431 124309339 + Zmym6 protein_coding processed_transcript MGP_BALBcJ_T0067853.1 MGP_BALBcJ_G0028774.1 mouse_genomes_project 4 124325934 124329562 + Zmym6 protein_coding processed_transcript MGP_BALBcJ_T0011565.1 MGP_BALBcJ_G0009690.1 mouse_genomes_project 4 140844356 140844664 + Gm26313 misc_RNA misc_RNA MGP_BALBcJ_T0067407.1 MGP_BALBcJ_G0028661.1 mouse_genomes_project 4 115784401 115785349 + MGP_BALBcJ_P0067407 Olfr1339 protein_coding protein_coding MGP_BALBcJ_T0007990.1 MGP_BALBcJ_G0006518.1 mouse_genomes_project 4 138737165 138738407 + Gm13056 lincRNA lincRNA MGP_BALBcJ_T0066391.1 MGP_BALBcJ_G0028452.1 mouse_genomes_project 4 95334929 95355108 - MGP_BALBcJ_P0066391 Tm2d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066392.1 MGP_BALBcJ_G0028452.1 mouse_genomes_project 4 95334929 95363140 - MGP_BALBcJ_P0066392 Tm2d1 protein_coding protein_coding MGP_BALBcJ_T0066393.1 MGP_BALBcJ_G0028452.1 mouse_genomes_project 4 95334929 95363326 - MGP_BALBcJ_P0066393 Tm2d1 protein_coding protein_coding MGP_BALBcJ_T0066394.1 MGP_BALBcJ_G0028452.1 mouse_genomes_project 4 95334929 95363386 - MGP_BALBcJ_P0066394 Tm2d1 protein_coding protein_coding MGP_BALBcJ_T0066395.1 MGP_BALBcJ_G0028452.1 mouse_genomes_project 4 95335164 95363312 - MGP_BALBcJ_P0066395 Tm2d1 protein_coding protein_coding MGP_BALBcJ_T0066044.1 MGP_BALBcJ_G0028367.1 mouse_genomes_project 4 70667520 70743730 - MGP_BALBcJ_P0066044 Rasef protein_coding protein_coding MGP_BALBcJ_T0066045.1 MGP_BALBcJ_G0028367.1 mouse_genomes_project 4 70667520 70743837 - MGP_BALBcJ_P0066045 Rasef protein_coding protein_coding MGP_BALBcJ_T0102532.1 MGP_BALBcJ_G0040348.1 mouse_genomes_project 4 112169026 112170072 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066185.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 82989627 83023973 + Adamtsl1 protein_coding retained_intron MGP_BALBcJ_T0066186.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 82989627 83379133 + MGP_BALBcJ_P0066186 Adamtsl1 protein_coding protein_coding MGP_BALBcJ_T0066187.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 82989635 83195004 + MGP_BALBcJ_P0066187 Adamtsl1 protein_coding protein_coding MGP_BALBcJ_T0066188.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 82989640 83379136 + MGP_BALBcJ_P0066188 Adamtsl1 protein_coding protein_coding MGP_BALBcJ_T0066189.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 82989687 83140269 + MGP_BALBcJ_P0066189 Adamtsl1 protein_coding protein_coding MGP_BALBcJ_T0066190.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 82989732 83176480 + Adamtsl1 protein_coding retained_intron MGP_BALBcJ_T0066191.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 83023810 83047701 + Adamtsl1 protein_coding retained_intron MGP_BALBcJ_T0066192.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 83139890 83190162 + MGP_BALBcJ_P0066192 Adamtsl1 protein_coding protein_coding MGP_BALBcJ_T0066193.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 83217783 83218397 + Adamtsl1 protein_coding processed_transcript MGP_BALBcJ_T0066194.1 MGP_BALBcJ_G0028390.1 mouse_genomes_project 4 83218060 83379133 + Adamtsl1 protein_coding retained_intron MGP_BALBcJ_T0004537.1 MGP_BALBcJ_G0003941.1 mouse_genomes_project 4 133293149 133300756 + Gm13008 antisense antisense MGP_BALBcJ_T0014607.1 MGP_BALBcJ_G0012704.1 mouse_genomes_project 4 80068714 80068915 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007966.1 MGP_BALBcJ_G0006498.1 mouse_genomes_project 4 130279760 130282952 + Gm26615 lincRNA lincRNA MGP_BALBcJ_T0067920.1 MGP_BALBcJ_G0028794.1 mouse_genomes_project 4 126357804 126363882 + MGP_BALBcJ_P0067920 Tmem54 protein_coding protein_coding MGP_BALBcJ_T0067921.1 MGP_BALBcJ_G0028794.1 mouse_genomes_project 4 126357830 126363882 + MGP_BALBcJ_P0067921 Tmem54 protein_coding protein_coding MGP_BALBcJ_T0067922.1 MGP_BALBcJ_G0028794.1 mouse_genomes_project 4 126357857 126363773 + MGP_BALBcJ_P0067922 Tmem54 protein_coding protein_coding MGP_BALBcJ_T0067923.1 MGP_BALBcJ_G0028794.1 mouse_genomes_project 4 126359125 126362800 + MGP_BALBcJ_P0067923 Tmem54 protein_coding protein_coding MGP_BALBcJ_T0014522.1 MGP_BALBcJ_G0012619.1 mouse_genomes_project 4 46875784 46876279 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010570.1 MGP_BALBcJ_G0008695.1 mouse_genomes_project 4 37768849 37768913 + Mir3094 miRNA miRNA MGP_BALBcJ_T0102555.1 MGP_BALBcJ_G0040371.1 mouse_genomes_project 4 142054806 142055259 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066916.1 MGP_BALBcJ_G0028554.1 mouse_genomes_project 4 106527169 106553231 - MGP_BALBcJ_P0066916 4930522H14Rik protein_coding protein_coding MGP_BALBcJ_T0066917.1 MGP_BALBcJ_G0028554.1 mouse_genomes_project 4 106527197 106553138 - MGP_BALBcJ_P0066917 4930522H14Rik protein_coding protein_coding MGP_BALBcJ_T0069039.1 MGP_BALBcJ_G0029038.1 mouse_genomes_project 4 139152337 139199096 - MGP_BALBcJ_P0069039 protein_coding protein_coding MGP_BALBcJ_T0069040.1 MGP_BALBcJ_G0029038.1 mouse_genomes_project 4 139158363 139199096 - MGP_BALBcJ_P0069040 protein_coding protein_coding MGP_BALBcJ_T0068974.1 MGP_BALBcJ_G0029023.1 mouse_genomes_project 4 138601006 138664538 + MGP_BALBcJ_P0068974 Fbxo42 protein_coding protein_coding MGP_BALBcJ_T0068975.1 MGP_BALBcJ_G0029023.1 mouse_genomes_project 4 138601015 138655203 + Fbxo42 protein_coding processed_transcript MGP_BALBcJ_T0007947.1 MGP_BALBcJ_G0006487.1 mouse_genomes_project 4 127936197 127937984 + Gm12972 lincRNA lincRNA MGP_BALBcJ_T0065032.1 MGP_BALBcJ_G0028118.1 mouse_genomes_project 4 37574101 37624420 - MGP_BALBcJ_P0065032 B4galt1 protein_coding protein_coding MGP_BALBcJ_T0065033.1 MGP_BALBcJ_G0028118.1 mouse_genomes_project 4 37578644 37624420 - MGP_BALBcJ_P0065033 B4galt1 protein_coding protein_coding MGP_BALBcJ_T0004493.1 MGP_BALBcJ_G0003905.1 mouse_genomes_project 4 113574270 113575158 + Gm12953 antisense antisense MGP_BALBcJ_T0069001.1 MGP_BALBcJ_G0029031.1 mouse_genomes_project 4 138894921 138898355 - MGP_BALBcJ_P0069001 Gm694 protein_coding protein_coding MGP_BALBcJ_T0069178.1 MGP_BALBcJ_G0029095.1 mouse_genomes_project 4 145934283 145968648 - MGP_BALBcJ_P0069178 Clcn6 protein_coding protein_coding MGP_BALBcJ_T0069179.1 MGP_BALBcJ_G0029095.1 mouse_genomes_project 4 145936158 145968640 - MGP_BALBcJ_P0069179 Clcn6 protein_coding protein_coding MGP_BALBcJ_T0069180.1 MGP_BALBcJ_G0029095.1 mouse_genomes_project 4 145936613 145968597 - MGP_BALBcJ_P0069180 Clcn6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069181.1 MGP_BALBcJ_G0029095.1 mouse_genomes_project 4 145954459 145968590 - Clcn6 protein_coding processed_transcript MGP_BALBcJ_T0069182.1 MGP_BALBcJ_G0029095.1 mouse_genomes_project 4 145956601 145968389 - MGP_BALBcJ_P0069182 Clcn6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018010.1 MGP_BALBcJ_G0015484.1 mouse_genomes_project 4 43310918 43314791 + Gm16731 processed_transcript processed_transcript MGP_BALBcJ_T0067987.1 MGP_BALBcJ_G0028809.1 mouse_genomes_project 4 126791442 126824190 - MGP_BALBcJ_P0067987 protein_coding protein_coding MGP_BALBcJ_T0067988.1 MGP_BALBcJ_G0028809.1 mouse_genomes_project 4 126794176 126795424 - protein_coding retained_intron MGP_BALBcJ_T0067989.1 MGP_BALBcJ_G0028809.1 mouse_genomes_project 4 126795899 126800288 - protein_coding retained_intron MGP_BALBcJ_T0067990.1 MGP_BALBcJ_G0028809.1 mouse_genomes_project 4 126799988 126807449 - protein_coding retained_intron MGP_BALBcJ_T0067991.1 MGP_BALBcJ_G0028809.1 mouse_genomes_project 4 126800135 126804384 - protein_coding retained_intron MGP_BALBcJ_T0067992.1 MGP_BALBcJ_G0028809.1 mouse_genomes_project 4 126800323 126804342 - protein_coding retained_intron MGP_BALBcJ_T0098949.1 MGP_BALBcJ_G0036996.1 mouse_genomes_project 4 139510384 139516044 - Gm13053 sense_intronic sense_intronic MGP_BALBcJ_T0014447.1 MGP_BALBcJ_G0012544.1 mouse_genomes_project 4 22384127 22384594 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101095.1 MGP_BALBcJ_G0039131.1 mouse_genomes_project 4 362876 362944 - Gm24016 snoRNA snoRNA MGP_BALBcJ_T0065904.1 MGP_BALBcJ_G0028328.1 mouse_genomes_project 4 59220370 59232555 + MGP_BALBcJ_P0065904 Slc31a2 protein_coding protein_coding MGP_BALBcJ_T0067767.1 MGP_BALBcJ_G0028757.1 mouse_genomes_project 4 123443971 123453073 - MGP_BALBcJ_P0067767 Map7d1 protein_coding protein_coding MGP_BALBcJ_T0067768.1 MGP_BALBcJ_G0028757.1 mouse_genomes_project 4 123443971 123469532 - MGP_BALBcJ_P0067768 Map7d1 protein_coding protein_coding MGP_BALBcJ_T0067769.1 MGP_BALBcJ_G0028757.1 mouse_genomes_project 4 123443971 123469538 - MGP_BALBcJ_P0067769 Map7d1 protein_coding protein_coding MGP_BALBcJ_T0067770.1 MGP_BALBcJ_G0028757.1 mouse_genomes_project 4 123443971 123469598 - MGP_BALBcJ_P0067770 Map7d1 protein_coding protein_coding MGP_BALBcJ_T0067771.1 MGP_BALBcJ_G0028757.1 mouse_genomes_project 4 123444767 123445353 - Map7d1 protein_coding retained_intron MGP_BALBcJ_T0067772.1 MGP_BALBcJ_G0028757.1 mouse_genomes_project 4 123445424 123446581 - Map7d1 protein_coding retained_intron MGP_BALBcJ_T0007862.1 MGP_BALBcJ_G0006426.1 mouse_genomes_project 4 86282277 86325243 - Gm12606 lincRNA lincRNA MGP_BALBcJ_T0007863.1 MGP_BALBcJ_G0006426.1 mouse_genomes_project 4 86282295 86326063 - Gm12606 lincRNA lincRNA MGP_BALBcJ_T0067711.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122279674 122307998 + MGP_BALBcJ_P0067711 Meaf6 protein_coding protein_coding MGP_BALBcJ_T0067712.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122279691 122304663 + MGP_BALBcJ_P0067712 Meaf6 protein_coding protein_coding MGP_BALBcJ_T0067713.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122279704 122304488 + MGP_BALBcJ_P0067713 Meaf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067714.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122279705 122284701 + Meaf6 protein_coding processed_transcript MGP_BALBcJ_T0067715.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122279801 122304226 + MGP_BALBcJ_P0067715 Meaf6 protein_coding protein_coding MGP_BALBcJ_T0067716.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122280728 122304231 + MGP_BALBcJ_P0067716 Meaf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067717.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122284438 122298173 + Meaf6 protein_coding processed_transcript MGP_BALBcJ_T0067718.1 MGP_BALBcJ_G0028746.1 mouse_genomes_project 4 122302757 122304202 + Meaf6 protein_coding retained_intron MGP_BALBcJ_T0099888.1 MGP_BALBcJ_G0037924.1 mouse_genomes_project 4 136213035 136213136 - Gm25280 snRNA snRNA MGP_BALBcJ_T0067210.1 MGP_BALBcJ_G0028620.1 mouse_genomes_project 4 113911134 114022722 + MGP_BALBcJ_P0067210 Zswim5 protein_coding protein_coding MGP_BALBcJ_T0067722.1 MGP_BALBcJ_G0028749.1 mouse_genomes_project 4 123226696 123247043 + MGP_BALBcJ_P0067722 Csf3r protein_coding protein_coding MGP_BALBcJ_T0067723.1 MGP_BALBcJ_G0028749.1 mouse_genomes_project 4 123226872 123234041 + Csf3r protein_coding processed_transcript MGP_BALBcJ_T0067724.1 MGP_BALBcJ_G0028749.1 mouse_genomes_project 4 123229438 123247042 + MGP_BALBcJ_P0067724 Csf3r protein_coding protein_coding MGP_BALBcJ_T0067725.1 MGP_BALBcJ_G0028749.1 mouse_genomes_project 4 123240313 123246489 + Csf3r protein_coding processed_transcript MGP_BALBcJ_T0069519.1 MGP_BALBcJ_G0029156.1 mouse_genomes_project 4 150201610 150297489 + MGP_BALBcJ_P0069519 Acot7 protein_coding protein_coding MGP_BALBcJ_T0069520.1 MGP_BALBcJ_G0029156.1 mouse_genomes_project 4 150209241 150242108 + Acot7 protein_coding processed_transcript MGP_BALBcJ_T0069521.1 MGP_BALBcJ_G0029156.1 mouse_genomes_project 4 150209610 150297492 + MGP_BALBcJ_P0069521 Acot7 protein_coding protein_coding MGP_BALBcJ_T0069522.1 MGP_BALBcJ_G0029156.1 mouse_genomes_project 4 150209682 150297484 + MGP_BALBcJ_P0069522 Acot7 protein_coding protein_coding MGP_BALBcJ_T0069523.1 MGP_BALBcJ_G0029156.1 mouse_genomes_project 4 150223294 150297484 + MGP_BALBcJ_P0069523 Acot7 protein_coding protein_coding MGP_BALBcJ_T0069524.1 MGP_BALBcJ_G0029156.1 mouse_genomes_project 4 150223352 150242188 + Acot7 protein_coding processed_transcript MGP_BALBcJ_T0066199.1 MGP_BALBcJ_G0028392.1 mouse_genomes_project 4 83514081 83515700 + MGP_BALBcJ_P0066199 Rraga protein_coding protein_coding MGP_BALBcJ_T0007845.1 MGP_BALBcJ_G0006412.1 mouse_genomes_project 4 65289074 65298315 - Gm12911 lincRNA lincRNA MGP_BALBcJ_T0014684.1 MGP_BALBcJ_G0012781.1 mouse_genomes_project 4 105498500 105498882 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014789.1 MGP_BALBcJ_G0012886.1 mouse_genomes_project 4 141189638 141190326 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007780.1 MGP_BALBcJ_G0006355.1 mouse_genomes_project 4 9554077 9574715 + Gm11820 lincRNA lincRNA MGP_BALBcJ_T0068296.1 MGP_BALBcJ_G0028865.1 mouse_genomes_project 4 130085772 130109202 - MGP_BALBcJ_P0068296 Fam76a protein_coding unknown_likely_coding MGP_BALBcJ_T0068297.1 MGP_BALBcJ_G0028865.1 mouse_genomes_project 4 130086589 130109257 - MGP_BALBcJ_P0068297 Fam76a protein_coding protein_coding MGP_BALBcJ_T0068298.1 MGP_BALBcJ_G0028865.1 mouse_genomes_project 4 130100512 130107673 - MGP_BALBcJ_P0068298 Fam76a protein_coding protein_coding MGP_BALBcJ_T0066447.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96738732 96754000 + Alg6 protein_coding retained_intron MGP_BALBcJ_T0066448.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96738733 96779436 + Alg6 protein_coding retained_intron MGP_BALBcJ_T0066449.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96738733 96780585 + MGP_BALBcJ_P0066449 Alg6 protein_coding protein_coding MGP_BALBcJ_T0066450.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96738744 96763576 + Alg6 protein_coding processed_transcript MGP_BALBcJ_T0066451.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96738744 96770201 + MGP_BALBcJ_P0066451 Alg6 protein_coding protein_coding MGP_BALBcJ_T0066452.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96738744 96770010 + MGP_BALBcJ_P0066452 Alg6 protein_coding protein_coding MGP_BALBcJ_T0066453.1 MGP_BALBcJ_G0028463.1 mouse_genomes_project 4 96742470 96756665 + Alg6 protein_coding retained_intron MGP_BALBcJ_T0007848.1 MGP_BALBcJ_G0006415.1 mouse_genomes_project 4 78741934 78745599 + Gm11412 lincRNA lincRNA MGP_BALBcJ_T0099818.1 MGP_BALBcJ_G0037854.1 mouse_genomes_project 4 27820626 27820730 - Gm25705 snRNA snRNA MGP_BALBcJ_T0068294.1 MGP_BALBcJ_G0028864.1 mouse_genomes_project 4 130039777 130071102 - MGP_BALBcJ_P0068294 Stx12 protein_coding protein_coding MGP_BALBcJ_T0068295.1 MGP_BALBcJ_G0028864.1 mouse_genomes_project 4 130043322 130049590 - Stx12 protein_coding processed_transcript MGP_BALBcJ_T0067295.1 MGP_BALBcJ_G0028635.1 mouse_genomes_project 4 114759327 114761788 + MGP_BALBcJ_P0067295 Gm12845 protein_coding protein_coding MGP_BALBcJ_T0064684.1 MGP_BALBcJ_G0028028.1 mouse_genomes_project 4 8449618 8451316 - MGP_BALBcJ_P0064684 Gm10604 protein_coding protein_coding MGP_BALBcJ_T0065954.1 MGP_BALBcJ_G0028341.1 mouse_genomes_project 4 59890495 60056701 + MGP_BALBcJ_P0065954 Zfp618 protein_coding protein_coding MGP_BALBcJ_T0065955.1 MGP_BALBcJ_G0028341.1 mouse_genomes_project 4 59890495 60062383 + MGP_BALBcJ_P0065955 Zfp618 protein_coding protein_coding MGP_BALBcJ_T0065956.1 MGP_BALBcJ_G0028341.1 mouse_genomes_project 4 59890495 60038459 + MGP_BALBcJ_P0065956 Zfp618 protein_coding protein_coding MGP_BALBcJ_T0065957.1 MGP_BALBcJ_G0028341.1 mouse_genomes_project 4 60043112 60044141 + Zfp618 protein_coding processed_transcript MGP_BALBcJ_T0068830.1 MGP_BALBcJ_G0028989.1 mouse_genomes_project 4 136264364 136269159 + MGP_BALBcJ_P0068830 Pla2g2e protein_coding protein_coding MGP_BALBcJ_T0068831.1 MGP_BALBcJ_G0028989.1 mouse_genomes_project 4 136264393 136268862 + MGP_BALBcJ_P0068831 Pla2g2e protein_coding protein_coding MGP_BALBcJ_T0068832.1 MGP_BALBcJ_G0028989.1 mouse_genomes_project 4 136265777 136269159 + MGP_BALBcJ_P0068832 Pla2g2e protein_coding protein_coding MGP_BALBcJ_T0069587.1 MGP_BALBcJ_G0029167.1 mouse_genomes_project 4 152034095 152041551 - MGP_BALBcJ_P0069587 Dffb protein_coding unknown_likely_coding MGP_BALBcJ_T0069588.1 MGP_BALBcJ_G0029167.1 mouse_genomes_project 4 152034103 152044763 - MGP_BALBcJ_P0069588 Dffb protein_coding protein_coding MGP_BALBcJ_T0069589.1 MGP_BALBcJ_G0029167.1 mouse_genomes_project 4 152038746 152044688 - Dffb protein_coding processed_transcript MGP_BALBcJ_T0069590.1 MGP_BALBcJ_G0029167.1 mouse_genomes_project 4 152042103 152044694 - Dffb protein_coding retained_intron MGP_BALBcJ_T0069591.1 MGP_BALBcJ_G0029167.1 mouse_genomes_project 4 152042251 152044626 - MGP_BALBcJ_P0069591 Dffb protein_coding unknown_likely_coding MGP_BALBcJ_T0069592.1 MGP_BALBcJ_G0029167.1 mouse_genomes_project 4 152044139 152044718 - Dffb protein_coding retained_intron MGP_BALBcJ_T0068697.1 MGP_BALBcJ_G0028957.1 mouse_genomes_project 4 134212258 134215529 - MGP_BALBcJ_P0068697 C1qc protein_coding protein_coding MGP_BALBcJ_T0068698.1 MGP_BALBcJ_G0028957.1 mouse_genomes_project 4 134214115 134215340 - C1qc protein_coding processed_transcript MGP_BALBcJ_T0069681.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153041680 153058398 + MGP_BALBcJ_P0069681 Pank4 protein_coding protein_coding MGP_BALBcJ_T0069682.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153041690 153058465 + MGP_BALBcJ_P0069682 Pank4 protein_coding protein_coding MGP_BALBcJ_T0069683.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153047532 153058416 + MGP_BALBcJ_P0069683 Pank4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069684.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153052066 153058465 + Pank4 protein_coding retained_intron MGP_BALBcJ_T0069685.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153053798 153056682 + Pank4 protein_coding retained_intron MGP_BALBcJ_T0069686.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153053806 153056752 + Pank4 protein_coding retained_intron MGP_BALBcJ_T0069687.1 MGP_BALBcJ_G0029185.1 mouse_genomes_project 4 153054105 153058461 + Pank4 protein_coding retained_intron MGP_BALBcJ_T0014557.1 MGP_BALBcJ_G0012654.1 mouse_genomes_project 4 59864055 59864310 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014492.1 MGP_BALBcJ_G0012589.1 mouse_genomes_project 4 35436937 35437873 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018015.1 MGP_BALBcJ_G0015488.1 mouse_genomes_project 4 60936229 61112078 + 8030451A03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018016.1 MGP_BALBcJ_G0015488.1 mouse_genomes_project 4 60936318 61006491 + 8030451A03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018017.1 MGP_BALBcJ_G0015488.1 mouse_genomes_project 4 60936335 60939726 + 8030451A03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018018.1 MGP_BALBcJ_G0015488.1 mouse_genomes_project 4 61110706 61111099 + 8030451A03Rik processed_transcript processed_transcript MGP_BALBcJ_T0065804.1 MGP_BALBcJ_G0028298.1 mouse_genomes_project 4 54385553 54716956 + MGP_BALBcJ_P0065804 Pakap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065806.1 MGP_BALBcJ_G0028298.1 mouse_genomes_project 4 54385704 54674789 + MGP_BALBcJ_P0065806 Pakap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065807.1 MGP_BALBcJ_G0028298.1 mouse_genomes_project 4 54456450 54714692 + MGP_BALBcJ_P0065807 Pakap protein_coding protein_coding MGP_BALBcJ_T0065813.1 MGP_BALBcJ_G0028298.1 mouse_genomes_project 4 54665340 54716958 + MGP_BALBcJ_P0065813 Pakap protein_coding protein_coding MGP_BALBcJ_T0007921.1 MGP_BALBcJ_G0006471.1 mouse_genomes_project 4 121736978 121742399 + 4933407E24Rik lincRNA lincRNA MGP_BALBcJ_T0066738.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104803993 104877971 + MGP_BALBcJ_P0066738 Lrp8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066739.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104804009 104876620 + MGP_BALBcJ_P0066739 Lrp8 protein_coding protein_coding MGP_BALBcJ_T0066740.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104804046 104877703 + MGP_BALBcJ_P0066740 Lrp8 protein_coding protein_coding MGP_BALBcJ_T0066741.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104804145 104874205 + MGP_BALBcJ_P0066741 Lrp8 protein_coding protein_coding MGP_BALBcJ_T0066742.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104804145 104876620 + MGP_BALBcJ_P0066742 Lrp8 protein_coding protein_coding MGP_BALBcJ_T0066743.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104804573 104853009 + Lrp8 protein_coding processed_transcript MGP_BALBcJ_T0066744.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104804982 104876620 + Lrp8 protein_coding processed_transcript MGP_BALBcJ_T0066745.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104824856 104876620 + Lrp8 protein_coding processed_transcript MGP_BALBcJ_T0066746.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104832644 104838897 + Lrp8 protein_coding retained_intron MGP_BALBcJ_T0066747.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104832664 104880644 + MGP_BALBcJ_P0066747 Lrp8 protein_coding protein_coding MGP_BALBcJ_T0066748.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104847847 104849942 + Lrp8 protein_coding retained_intron MGP_BALBcJ_T0066749.1 MGP_BALBcJ_G0028524.1 mouse_genomes_project 4 104851774 104858509 + Lrp8 protein_coding processed_transcript MGP_BALBcJ_T0066111.1 MGP_BALBcJ_G0028380.1 mouse_genomes_project 4 79752410 79814764 - MGP_BALBcJ_P0066111 Zdhhc21 protein_coding protein_coding MGP_BALBcJ_T0066112.1 MGP_BALBcJ_G0028380.1 mouse_genomes_project 4 79757715 79814652 - MGP_BALBcJ_P0066112 Zdhhc21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066113.1 MGP_BALBcJ_G0028380.1 mouse_genomes_project 4 79759877 79815049 - MGP_BALBcJ_P0066113 Zdhhc21 protein_coding protein_coding MGP_BALBcJ_T0066114.1 MGP_BALBcJ_G0028380.1 mouse_genomes_project 4 79791800 79805647 - MGP_BALBcJ_P0066114 Zdhhc21 protein_coding protein_coding MGP_BALBcJ_T0066115.1 MGP_BALBcJ_G0028380.1 mouse_genomes_project 4 79793857 79814645 - Zdhhc21 protein_coding retained_intron MGP_BALBcJ_T0066116.1 MGP_BALBcJ_G0028380.1 mouse_genomes_project 4 79802450 79814664 - MGP_BALBcJ_P0066116 Zdhhc21 protein_coding protein_coding MGP_BALBcJ_T0065018.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37487336 37488982 + Dnaja1 protein_coding processed_transcript MGP_BALBcJ_T0065019.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37487666 37501591 + MGP_BALBcJ_P0065019 Dnaja1 protein_coding protein_coding MGP_BALBcJ_T0065020.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37487745 37495488 + Dnaja1 protein_coding processed_transcript MGP_BALBcJ_T0065021.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37488108 37500527 + Dnaja1 protein_coding processed_transcript MGP_BALBcJ_T0065022.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37488108 37503776 + MGP_BALBcJ_P0065022 Dnaja1 protein_coding protein_coding MGP_BALBcJ_T0065023.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37488116 37497054 + MGP_BALBcJ_P0065023 Dnaja1 protein_coding protein_coding MGP_BALBcJ_T0065024.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37488131 37493459 + MGP_BALBcJ_P0065024 Dnaja1 protein_coding protein_coding MGP_BALBcJ_T0065025.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37488303 37491573 + MGP_BALBcJ_P0065025 Dnaja1 protein_coding protein_coding MGP_BALBcJ_T0065026.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37488548 37489504 + Dnaja1 protein_coding processed_transcript MGP_BALBcJ_T0065027.1 MGP_BALBcJ_G0028116.1 mouse_genomes_project 4 37489441 37497558 + Dnaja1 protein_coding processed_transcript MGP_BALBcJ_T0101146.1 MGP_BALBcJ_G0039182.1 mouse_genomes_project 4 88062050 88062182 - Gm25244 snoRNA snoRNA MGP_BALBcJ_T0069095.1 MGP_BALBcJ_G0029056.1 mouse_genomes_project 4 141224526 141230675 - MGP_BALBcJ_P0069095 Gm13089 protein_coding protein_coding MGP_BALBcJ_T0069791.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153747718 153751021 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0069792.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153747723 153760135 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0069793.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153747723 153762231 - MGP_BALBcJ_P0069793 Mib2 protein_coding protein_coding MGP_BALBcJ_T0069794.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153747724 153749769 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0069795.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153748879 153749769 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0069796.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153749984 153752625 - MGP_BALBcJ_P0069796 Mib2 protein_coding protein_coding MGP_BALBcJ_T0069797.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153750665 153751381 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0069798.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153754361 153762230 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0069799.1 MGP_BALBcJ_G0029202.1 mouse_genomes_project 4 153760072 153762226 - Mib2 protein_coding processed_transcript MGP_BALBcJ_T0068829.1 MGP_BALBcJ_G0028988.1 mouse_genomes_project 4 136257488 136260430 - MGP_BALBcJ_P0068829 protein_coding protein_coding MGP_BALBcJ_T0014377.1 MGP_BALBcJ_G0012474.1 mouse_genomes_project 4 3025275 3045908 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065614.1 MGP_BALBcJ_G0028243.1 mouse_genomes_project 4 43794406 43836413 - MGP_BALBcJ_P0065614 protein_coding protein_coding MGP_BALBcJ_T0065615.1 MGP_BALBcJ_G0028243.1 mouse_genomes_project 4 43794426 43836413 - MGP_BALBcJ_P0065615 protein_coding protein_coding MGP_BALBcJ_T0065616.1 MGP_BALBcJ_G0028243.1 mouse_genomes_project 4 43795755 43804486 - protein_coding processed_transcript MGP_BALBcJ_T0065617.1 MGP_BALBcJ_G0028243.1 mouse_genomes_project 4 43817239 43818924 - protein_coding processed_transcript MGP_BALBcJ_T0010565.1 MGP_BALBcJ_G0008690.1 mouse_genomes_project 4 30108762 30108891 + Mir8118 miRNA miRNA MGP_BALBcJ_T0069757.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153580829 153652327 + MGP_BALBcJ_P0069757 Gnb1 protein_coding protein_coding MGP_BALBcJ_T0069758.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153580832 153652327 + MGP_BALBcJ_P0069758 Gnb1 protein_coding protein_coding MGP_BALBcJ_T0069759.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153580838 153652327 + MGP_BALBcJ_P0069759 Gnb1 protein_coding protein_coding MGP_BALBcJ_T0069760.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153582379 153636295 + MGP_BALBcJ_P0069760 Gnb1 protein_coding protein_coding MGP_BALBcJ_T0069761.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153613211 153648232 + MGP_BALBcJ_P0069761 Gnb1 protein_coding protein_coding MGP_BALBcJ_T0069762.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153613385 153634454 + Gnb1 protein_coding retained_intron MGP_BALBcJ_T0069763.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153618359 153652325 + MGP_BALBcJ_P0069763 Gnb1 protein_coding protein_coding MGP_BALBcJ_T0069764.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153636135 153648301 + Gnb1 protein_coding retained_intron MGP_BALBcJ_T0069765.1 MGP_BALBcJ_G0029196.1 mouse_genomes_project 4 153646319 153650749 + Gnb1 protein_coding retained_intron MGP_BALBcJ_T0069928.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154246526 154250323 - Agrn protein_coding retained_intron MGP_BALBcJ_T0069929.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154246526 154267156 - MGP_BALBcJ_P0069929 Agrn protein_coding protein_coding MGP_BALBcJ_T0069930.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154246526 154267156 - MGP_BALBcJ_P0069930 Agrn protein_coding protein_coding MGP_BALBcJ_T0069931.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154246526 154267156 - MGP_BALBcJ_P0069931 Agrn protein_coding protein_coding MGP_BALBcJ_T0069932.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154246530 154267362 - Agrn protein_coding retained_intron MGP_BALBcJ_T0069933.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154247014 154278746 - MGP_BALBcJ_P0069933 Agrn protein_coding protein_coding MGP_BALBcJ_T0069934.1 MGP_BALBcJ_G0029228.1 mouse_genomes_project 4 154253531 154254963 - Agrn protein_coding processed_transcript MGP_BALBcJ_T0066087.1 MGP_BALBcJ_G0028377.1 mouse_genomes_project 4 77937609 77983752 + MGP_BALBcJ_P0066087 Lurap1l protein_coding protein_coding MGP_BALBcJ_T0068813.1 MGP_BALBcJ_G0028984.1 mouse_genomes_project 4 136108148 136129511 + MGP_BALBcJ_P0068813 Pla2g2c protein_coding protein_coding MGP_BALBcJ_T0068814.1 MGP_BALBcJ_G0028984.1 mouse_genomes_project 4 136108680 136127073 + MGP_BALBcJ_P0068814 Pla2g2c protein_coding protein_coding MGP_BALBcJ_T0068815.1 MGP_BALBcJ_G0028984.1 mouse_genomes_project 4 136108680 136127954 + MGP_BALBcJ_P0068815 Pla2g2c protein_coding protein_coding MGP_BALBcJ_T0099821.1 MGP_BALBcJ_G0037857.1 mouse_genomes_project 4 33485479 33485586 + Gm23314 snRNA snRNA MGP_BALBcJ_T0066723.1 MGP_BALBcJ_G0028521.1 mouse_genomes_project 4 104372411 104422148 + MGP_BALBcJ_P0066723 Ndc1 protein_coding protein_coding MGP_BALBcJ_T0066724.1 MGP_BALBcJ_G0028521.1 mouse_genomes_project 4 104372507 104420135 + MGP_BALBcJ_P0066724 Ndc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066725.1 MGP_BALBcJ_G0028521.1 mouse_genomes_project 4 104372542 104422125 + MGP_BALBcJ_P0066725 Ndc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066726.1 MGP_BALBcJ_G0028521.1 mouse_genomes_project 4 104372679 104416952 + MGP_BALBcJ_P0066726 Ndc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066727.1 MGP_BALBcJ_G0028521.1 mouse_genomes_project 4 104385769 104391960 + Ndc1 protein_coding processed_transcript MGP_BALBcJ_T0066728.1 MGP_BALBcJ_G0028521.1 mouse_genomes_project 4 104386146 104395935 + Ndc1 protein_coding retained_intron MGP_BALBcJ_T0068590.1 MGP_BALBcJ_G0028931.1 mouse_genomes_project 4 133002191 133026146 + MGP_BALBcJ_P0068590 Il22ra1 protein_coding protein_coding MGP_BALBcJ_T0069530.1 MGP_BALBcJ_G0029159.1 mouse_genomes_project 4 150322607 150332502 + MGP_BALBcJ_P0069530 Icmt protein_coding protein_coding MGP_BALBcJ_T0069531.1 MGP_BALBcJ_G0029159.1 mouse_genomes_project 4 150322684 150332501 + MGP_BALBcJ_P0069531 Icmt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069532.1 MGP_BALBcJ_G0029159.1 mouse_genomes_project 4 150323036 150326135 + Icmt protein_coding processed_transcript MGP_BALBcJ_T0069533.1 MGP_BALBcJ_G0029159.1 mouse_genomes_project 4 150330767 150332449 + Icmt protein_coding processed_transcript MGP_BALBcJ_T0008005.1 MGP_BALBcJ_G0006533.1 mouse_genomes_project 4 151275280 151275700 + Gm13174 lincRNA lincRNA MGP_BALBcJ_T0014610.1 MGP_BALBcJ_G0012707.1 mouse_genomes_project 4 81365099 81365406 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007838.1 MGP_BALBcJ_G0006405.1 mouse_genomes_project 4 59641496 59654640 + Gm11210 lincRNA lincRNA MGP_BALBcJ_T0014625.1 MGP_BALBcJ_G0012722.1 mouse_genomes_project 4 87498401 87499153 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069200.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146074764 146081209 - MGP_BALBcJ_P0069200 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069201.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146074764 146080984 - MGP_BALBcJ_P0069201 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069202.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146074835 146080989 - MGP_BALBcJ_P0069202 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069203.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146074836 146081133 - MGP_BALBcJ_P0069203 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069204.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146075057 146081214 - MGP_BALBcJ_P0069204 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069205.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146075140 146078795 - MGP_BALBcJ_P0069205 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069206.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146075166 146081001 - MGP_BALBcJ_P0069206 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0069207.1 MGP_BALBcJ_G0029100.1 mouse_genomes_project 4 146078519 146080722 - MGP_BALBcJ_P0069207 Fbxo6 protein_coding protein_coding MGP_BALBcJ_T0014546.1 MGP_BALBcJ_G0012643.1 mouse_genomes_project 4 52202017 52202369 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004483.1 MGP_BALBcJ_G0003898.1 mouse_genomes_project 4 104829575 104832524 - Lrp8os1 antisense antisense MGP_BALBcJ_T0004484.1 MGP_BALBcJ_G0003898.1 mouse_genomes_project 4 104829596 104832524 - Lrp8os1 antisense antisense MGP_BALBcJ_T0068186.1 MGP_BALBcJ_G0028842.1 mouse_genomes_project 4 129080938 129082308 + MGP_BALBcJ_P0068186 Tmem200b protein_coding protein_coding MGP_BALBcJ_T0018046.1 MGP_BALBcJ_G0015509.1 mouse_genomes_project 4 114249148 114249597 - 1700012C08Rik processed_transcript processed_transcript MGP_BALBcJ_T0065744.1 MGP_BALBcJ_G0028282.1 mouse_genomes_project 4 50598998 50607765 + MGP_BALBcJ_P0065744 Tal2 protein_coding protein_coding MGP_BALBcJ_T0066058.1 MGP_BALBcJ_G0028371.1 mouse_genomes_project 4 72187391 72188343 - MGP_BALBcJ_P0066058 Tmem261 protein_coding protein_coding MGP_BALBcJ_T0101181.1 MGP_BALBcJ_G0039217.1 mouse_genomes_project 4 140699283 140699415 + Gm22039 snoRNA snoRNA MGP_BALBcJ_T0064536.1 MGP_BALBcJ_G0027998.1 mouse_genomes_project 4 535921 550125 - MGP_BALBcJ_P0064536 Sdr16c5 protein_coding protein_coding MGP_BALBcJ_T0064537.1 MGP_BALBcJ_G0027998.1 mouse_genomes_project 4 542802 547083 - Sdr16c5 protein_coding processed_transcript MGP_BALBcJ_T0004490.1 MGP_BALBcJ_G0003902.1 mouse_genomes_project 4 111797892 111887525 - 9130410C08Rik antisense antisense MGP_BALBcJ_T0069820.1 MGP_BALBcJ_G0029210.1 mouse_genomes_project 4 153894185 153894956 + Mrpl20 protein_coding processed_transcript MGP_BALBcJ_T0069821.1 MGP_BALBcJ_G0029210.1 mouse_genomes_project 4 153894834 153900380 + MGP_BALBcJ_P0069821 Mrpl20 protein_coding protein_coding MGP_BALBcJ_T0069822.1 MGP_BALBcJ_G0029210.1 mouse_genomes_project 4 153894960 153900347 + MGP_BALBcJ_P0069822 Mrpl20 protein_coding protein_coding MGP_BALBcJ_T0069823.1 MGP_BALBcJ_G0029210.1 mouse_genomes_project 4 153894963 153901524 + MGP_BALBcJ_P0069823 Mrpl20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069824.1 MGP_BALBcJ_G0029210.1 mouse_genomes_project 4 153894965 153898707 + MGP_BALBcJ_P0069824 Mrpl20 protein_coding protein_coding MGP_BALBcJ_T0069825.1 MGP_BALBcJ_G0029210.1 mouse_genomes_project 4 153895072 153900343 + Mrpl20 protein_coding processed_transcript MGP_BALBcJ_T0010597.1 MGP_BALBcJ_G0008722.1 mouse_genomes_project 4 116199294 116199360 + Mir1957a miRNA miRNA MGP_BALBcJ_T0068700.1 MGP_BALBcJ_G0028959.1 mouse_genomes_project 4 134251885 134276681 - MGP_BALBcJ_P0068700 Epha8 protein_coding protein_coding MGP_BALBcJ_T0066498.1 MGP_BALBcJ_G0028475.1 mouse_genomes_project 4 98615005 98626704 + MGP_BALBcJ_P0066498 Leprot protein_coding protein_coding MGP_BALBcJ_T0066499.1 MGP_BALBcJ_G0028475.1 mouse_genomes_project 4 98615080 98626704 + MGP_BALBcJ_P0066499 Leprot protein_coding protein_coding MGP_BALBcJ_T0069940.1 MGP_BALBcJ_G0029233.1 mouse_genomes_project 4 154311930 154317656 - MGP_BALBcJ_P0069940 Klhl17 protein_coding protein_coding MGP_BALBcJ_T0064997.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36949322 36954088 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0064998.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36949326 36966997 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0064999.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36950398 36985902 - MGP_BALBcJ_P0064999 Ddx58 protein_coding protein_coding MGP_BALBcJ_T0065000.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36953729 36954340 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0065001.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36954315 36959545 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0065002.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36954397 36985774 - MGP_BALBcJ_P0065002 Ddx58 protein_coding protein_coding MGP_BALBcJ_T0065003.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36969827 36985829 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0065004.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36970272 36985796 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0065005.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36973029 36974837 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0065006.1 MGP_BALBcJ_G0028111.1 mouse_genomes_project 4 36973539 36985899 - Ddx58 protein_coding processed_transcript MGP_BALBcJ_T0066687.1 MGP_BALBcJ_G0028515.1 mouse_genomes_project 4 104178995 104203571 + MGP_BALBcJ_P0066687 Tmem59 protein_coding protein_coding MGP_BALBcJ_T0066688.1 MGP_BALBcJ_G0028515.1 mouse_genomes_project 4 104179123 104192629 + MGP_BALBcJ_P0066688 Tmem59 protein_coding protein_coding MGP_BALBcJ_T0066689.1 MGP_BALBcJ_G0028515.1 mouse_genomes_project 4 104179123 104203273 + MGP_BALBcJ_P0066689 Tmem59 protein_coding protein_coding MGP_BALBcJ_T0066690.1 MGP_BALBcJ_G0028515.1 mouse_genomes_project 4 104179263 104192832 + Tmem59 protein_coding retained_intron MGP_BALBcJ_T0066691.1 MGP_BALBcJ_G0028515.1 mouse_genomes_project 4 104179322 104203081 + MGP_BALBcJ_P0066691 Tmem59 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066692.1 MGP_BALBcJ_G0028515.1 mouse_genomes_project 4 104179614 104203569 + Tmem59 protein_coding processed_transcript MGP_BALBcJ_T0004524.1 MGP_BALBcJ_G0003931.1 mouse_genomes_project 4 127322772 127347659 - Gm12963 antisense antisense MGP_BALBcJ_T0004525.1 MGP_BALBcJ_G0003931.1 mouse_genomes_project 4 127325367 127347659 - Gm12963 antisense antisense MGP_BALBcJ_T0004526.1 MGP_BALBcJ_G0003931.1 mouse_genomes_project 4 127325371 127326988 - Gm12963 antisense antisense MGP_BALBcJ_T0007988.1 MGP_BALBcJ_G0006516.1 mouse_genomes_project 4 138113088 138121326 + lincRNA lincRNA MGP_BALBcJ_T0018073.1 MGP_BALBcJ_G0015522.1 mouse_genomes_project 4 150446254 150450151 - Gm16334 processed_transcript processed_transcript MGP_BALBcJ_T0101151.1 MGP_BALBcJ_G0039187.1 mouse_genomes_project 4 100583454 100583583 - Gm25877 snoRNA snoRNA MGP_BALBcJ_T0064894.1 MGP_BALBcJ_G0028083.1 mouse_genomes_project 4 29462238 29609986 - MGP_BALBcJ_P0064894 Ankrd6 protein_coding protein_coding MGP_BALBcJ_T0064895.1 MGP_BALBcJ_G0028083.1 mouse_genomes_project 4 29463943 29518389 - MGP_BALBcJ_P0064895 Ankrd6 protein_coding protein_coding MGP_BALBcJ_T0064896.1 MGP_BALBcJ_G0028083.1 mouse_genomes_project 4 29464316 29522137 - MGP_BALBcJ_P0064896 Ankrd6 protein_coding unknown_likely_coding MGP_BALBcJ_T0064897.1 MGP_BALBcJ_G0028083.1 mouse_genomes_project 4 29479446 29480875 - Ankrd6 protein_coding processed_transcript MGP_BALBcJ_T0064898.1 MGP_BALBcJ_G0028083.1 mouse_genomes_project 4 29482537 29580590 - Ankrd6 protein_coding processed_transcript MGP_BALBcJ_T0064899.1 MGP_BALBcJ_G0028083.1 mouse_genomes_project 4 29485176 29518630 - Ankrd6 protein_coding processed_transcript MGP_BALBcJ_T0010562.1 MGP_BALBcJ_G0008687.1 mouse_genomes_project 4 20139651 20139741 - Gm25978 miRNA miRNA MGP_BALBcJ_T0064756.1 MGP_BALBcJ_G0028052.1 mouse_genomes_project 4 16142429 16239468 - MGP_BALBcJ_P0064756 Wwp1 protein_coding protein_coding MGP_BALBcJ_T0064757.1 MGP_BALBcJ_G0028052.1 mouse_genomes_project 4 16143799 16206667 - MGP_BALBcJ_P0064757 Wwp1 protein_coding protein_coding MGP_BALBcJ_T0067002.1 MGP_BALBcJ_G0028574.1 mouse_genomes_project 4 111944121 111972240 - MGP_BALBcJ_P0067002 Cmpk1 protein_coding protein_coding MGP_BALBcJ_T0067003.1 MGP_BALBcJ_G0028574.1 mouse_genomes_project 4 111948289 111972148 - MGP_BALBcJ_P0067003 Cmpk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067004.1 MGP_BALBcJ_G0028574.1 mouse_genomes_project 4 111954220 111972071 - MGP_BALBcJ_P0067004 Cmpk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067005.1 MGP_BALBcJ_G0028574.1 mouse_genomes_project 4 111969816 111972148 - Cmpk1 protein_coding processed_transcript MGP_BALBcJ_T0007952.1 MGP_BALBcJ_G0006491.1 mouse_genomes_project 4 128804478 128829782 - Gm12962 lincRNA lincRNA MGP_BALBcJ_T0007953.1 MGP_BALBcJ_G0006491.1 mouse_genomes_project 4 128804806 128834309 - Gm12962 lincRNA lincRNA MGP_BALBcJ_T0067585.1 MGP_BALBcJ_G0028711.1 mouse_genomes_project 4 120064665 120079846 - Mfsd2a protein_coding processed_transcript MGP_BALBcJ_T0067586.1 MGP_BALBcJ_G0028711.1 mouse_genomes_project 4 120064665 120079882 - MGP_BALBcJ_P0067586 Mfsd2a protein_coding protein_coding MGP_BALBcJ_T0067587.1 MGP_BALBcJ_G0028711.1 mouse_genomes_project 4 120075432 120078682 - Mfsd2a protein_coding processed_transcript MGP_BALBcJ_T0067588.1 MGP_BALBcJ_G0028711.1 mouse_genomes_project 4 120075459 120079882 - MGP_BALBcJ_P0067588 Mfsd2a protein_coding protein_coding MGP_BALBcJ_T0001409.1 MGP_BALBcJ_G0001331.1 mouse_genomes_project 4 44612065 44715075 - TEC TEC MGP_BALBcJ_T0068105.1 MGP_BALBcJ_G0028826.1 mouse_genomes_project 4 127432236 127441182 - MGP_BALBcJ_P0068105 Hcrtr1 protein_coding protein_coding MGP_BALBcJ_T0068106.1 MGP_BALBcJ_G0028826.1 mouse_genomes_project 4 127432236 127440571 - MGP_BALBcJ_P0068106 Hcrtr1 protein_coding protein_coding MGP_BALBcJ_T0068107.1 MGP_BALBcJ_G0028826.1 mouse_genomes_project 4 127432236 127441379 - MGP_BALBcJ_P0068107 Hcrtr1 protein_coding protein_coding MGP_BALBcJ_T0068108.1 MGP_BALBcJ_G0028826.1 mouse_genomes_project 4 127432860 127439648 - MGP_BALBcJ_P0068108 Hcrtr1 protein_coding protein_coding MGP_BALBcJ_T0014816.1 MGP_BALBcJ_G0012913.1 mouse_genomes_project 4 152117928 152118034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064722.1 MGP_BALBcJ_G0028038.1 mouse_genomes_project 4 11318296 11373628 + MGP_BALBcJ_P0064722 Tmem55a protein_coding protein_coding MGP_BALBcJ_T0014632.1 MGP_BALBcJ_G0012729.1 mouse_genomes_project 4 89413733 89414031 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014498.1 MGP_BALBcJ_G0012595.1 mouse_genomes_project 4 36810554 36812442 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069912.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154120330 154136752 - MGP_BALBcJ_P0069912 Ttll10 protein_coding protein_coding MGP_BALBcJ_T0069913.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154120403 154145374 - MGP_BALBcJ_P0069913 Ttll10 protein_coding protein_coding MGP_BALBcJ_T0069914.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154120772 154136400 - MGP_BALBcJ_P0069914 Ttll10 protein_coding protein_coding MGP_BALBcJ_T0069915.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154121277 154129922 - Ttll10 protein_coding processed_transcript MGP_BALBcJ_T0069916.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154128264 154145304 - Ttll10 protein_coding retained_intron MGP_BALBcJ_T0069917.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154128997 154130782 - Ttll10 protein_coding processed_transcript MGP_BALBcJ_T0069918.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154129007 154133907 - Ttll10 protein_coding processed_transcript MGP_BALBcJ_T0069919.1 MGP_BALBcJ_G0029226.1 mouse_genomes_project 4 154132721 154133875 - Ttll10 protein_coding retained_intron MGP_BALBcJ_T0014618.1 MGP_BALBcJ_G0012715.1 mouse_genomes_project 4 84586432 84587204 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099890.1 MGP_BALBcJ_G0037926.1 mouse_genomes_project 4 142517378 142517544 - Gm25938 snRNA snRNA MGP_BALBcJ_T0011558.1 MGP_BALBcJ_G0009683.1 mouse_genomes_project 4 108982563 108982889 - Gm25844 misc_RNA misc_RNA MGP_BALBcJ_T0007917.1 MGP_BALBcJ_G0006470.1 mouse_genomes_project 4 121580832 121585703 - 1700057H15Rik lincRNA lincRNA MGP_BALBcJ_T0007918.1 MGP_BALBcJ_G0006470.1 mouse_genomes_project 4 121580832 121619947 - 1700057H15Rik lincRNA lincRNA MGP_BALBcJ_T0007919.1 MGP_BALBcJ_G0006470.1 mouse_genomes_project 4 121618553 121653198 - 1700057H15Rik lincRNA lincRNA MGP_BALBcJ_T0007920.1 MGP_BALBcJ_G0006470.1 mouse_genomes_project 4 121618886 121619937 - 1700057H15Rik lincRNA lincRNA MGP_BALBcJ_T0065562.1 MGP_BALBcJ_G0028230.1 mouse_genomes_project 4 42807193 42885938 + MGP_BALBcJ_P0065562 Tmod1 protein_coding protein_coding MGP_BALBcJ_T0065563.1 MGP_BALBcJ_G0028230.1 mouse_genomes_project 4 42807467 42859796 + MGP_BALBcJ_P0065563 Tmod1 protein_coding protein_coding MGP_BALBcJ_T0065564.1 MGP_BALBcJ_G0028230.1 mouse_genomes_project 4 42846034 42869375 + Tmod1 protein_coding processed_transcript MGP_BALBcJ_T0065565.1 MGP_BALBcJ_G0028230.1 mouse_genomes_project 4 42851543 42859780 + Tmod1 protein_coding processed_transcript MGP_BALBcJ_T0065566.1 MGP_BALBcJ_G0028230.1 mouse_genomes_project 4 42869909 42884379 + Tmod1 protein_coding processed_transcript MGP_BALBcJ_T0102543.1 MGP_BALBcJ_G0040359.1 mouse_genomes_project 4 119754252 119762207 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014616.1 MGP_BALBcJ_G0012713.1 mouse_genomes_project 4 83394429 83394758 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014375.1 MGP_BALBcJ_G0012472.1 mouse_genomes_project 4 2746763 2747638 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099849.1 MGP_BALBcJ_G0037885.1 mouse_genomes_project 4 93898773 93898836 + Gm27579 snRNA snRNA MGP_BALBcJ_T0068543.1 MGP_BALBcJ_G0028922.1 mouse_genomes_project 4 132385024 132443723 + MGP_BALBcJ_P0068543 Runx3 protein_coding protein_coding MGP_BALBcJ_T0068544.1 MGP_BALBcJ_G0028922.1 mouse_genomes_project 4 132417862 132420897 + Runx3 protein_coding retained_intron MGP_BALBcJ_T0068545.1 MGP_BALBcJ_G0028922.1 mouse_genomes_project 4 132418084 132420659 + Runx3 protein_coding processed_transcript MGP_BALBcJ_T0068546.1 MGP_BALBcJ_G0028922.1 mouse_genomes_project 4 132418429 132420714 + Runx3 protein_coding processed_transcript MGP_BALBcJ_T0068547.1 MGP_BALBcJ_G0028922.1 mouse_genomes_project 4 132419723 132420630 + Runx3 protein_coding processed_transcript MGP_BALBcJ_T0067743.1 MGP_BALBcJ_G0028754.1 mouse_genomes_project 4 123354137 123356268 + MGP_BALBcJ_P0067743 Eva1b protein_coding protein_coding MGP_BALBcJ_T0067744.1 MGP_BALBcJ_G0028754.1 mouse_genomes_project 4 123354396 123356269 + MGP_BALBcJ_P0067744 Eva1b protein_coding protein_coding MGP_BALBcJ_T0067745.1 MGP_BALBcJ_G0028754.1 mouse_genomes_project 4 123354925 123356259 + MGP_BALBcJ_P0067745 Eva1b protein_coding protein_coding MGP_BALBcJ_T0014575.1 MGP_BALBcJ_G0012672.1 mouse_genomes_project 4 68827526 68828516 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010609.1 MGP_BALBcJ_G0008734.1 mouse_genomes_project 4 127049483 127049609 - Gm28017 miRNA miRNA MGP_BALBcJ_T0007944.1 MGP_BALBcJ_G0006485.1 mouse_genomes_project 4 127257422 127260617 + 1700003M07Rik lincRNA lincRNA MGP_BALBcJ_T0007945.1 MGP_BALBcJ_G0006485.1 mouse_genomes_project 4 127257898 127260754 + 1700003M07Rik lincRNA lincRNA MGP_BALBcJ_T0099820.1 MGP_BALBcJ_G0037856.1 mouse_genomes_project 4 30781150 30781258 + Gm25623 snRNA snRNA MGP_BALBcJ_T0014446.1 MGP_BALBcJ_G0012543.1 mouse_genomes_project 4 22371273 22371658 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004581.1 MGP_BALBcJ_G0003974.1 mouse_genomes_project 4 147712759 147715269 + antisense antisense MGP_BALBcJ_T0004582.1 MGP_BALBcJ_G0003974.1 mouse_genomes_project 4 147712759 147715394 + antisense antisense MGP_BALBcJ_T0065039.1 MGP_BALBcJ_G0028121.1 mouse_genomes_project 4 37722868 37739951 + MGP_BALBcJ_P0065039 Chmp5 protein_coding protein_coding MGP_BALBcJ_T0007841.1 MGP_BALBcJ_G0006408.1 mouse_genomes_project 4 60589832 60594852 + Gm11482 lincRNA lincRNA MGP_BALBcJ_T0004549.1 MGP_BALBcJ_G0003951.1 mouse_genomes_project 4 138394363 138404506 - Gm13031 antisense antisense MGP_BALBcJ_T0101153.1 MGP_BALBcJ_G0039189.1 mouse_genomes_project 4 103112409 103112524 - Gm26047 snoRNA snoRNA MGP_BALBcJ_T0004597.1 MGP_BALBcJ_G0003987.1 mouse_genomes_project 4 153427393 153428176 + Gm27200 antisense antisense MGP_BALBcJ_T0064817.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21019210 21107760 + Mms22l protein_coding retained_intron MGP_BALBcJ_T0064818.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21019210 21130319 + MGP_BALBcJ_P0064818 Mms22l protein_coding protein_coding MGP_BALBcJ_T0064819.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21019221 21029442 + MGP_BALBcJ_P0064819 Mms22l protein_coding protein_coding MGP_BALBcJ_T0064820.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21019224 21019804 + Mms22l protein_coding processed_transcript MGP_BALBcJ_T0064821.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21019303 21130315 + MGP_BALBcJ_P0064821 Mms22l protein_coding protein_coding MGP_BALBcJ_T0064822.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21020652 21055163 + MGP_BALBcJ_P0064822 Mms22l protein_coding protein_coding MGP_BALBcJ_T0064823.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21031199 21130318 + Mms22l protein_coding retained_intron MGP_BALBcJ_T0064824.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21033473 21127354 + MGP_BALBcJ_P0064824 Mms22l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064825.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21062350 21100822 + MGP_BALBcJ_P0064825 Mms22l protein_coding protein_coding MGP_BALBcJ_T0064826.1 MGP_BALBcJ_G0028067.1 mouse_genomes_project 4 21104874 21117640 + Mms22l protein_coding processed_transcript MGP_BALBcJ_T0066446.1 MGP_BALBcJ_G0028462.1 mouse_genomes_project 4 96674518 96677019 + MGP_BALBcJ_P0066446 Foxd3 protein_coding protein_coding MGP_BALBcJ_T0014662.1 MGP_BALBcJ_G0012759.1 mouse_genomes_project 4 98865054 98866083 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066330.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92519760 92889771 + MGP_BALBcJ_P0066330 Fggy protein_coding protein_coding MGP_BALBcJ_T0066331.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92519764 92804584 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066332.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92519772 92889767 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066333.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92519773 92558562 + MGP_BALBcJ_P0066333 Fggy protein_coding protein_coding MGP_BALBcJ_T0066334.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92541593 92786112 + MGP_BALBcJ_P0066334 Fggy protein_coding protein_coding MGP_BALBcJ_T0066335.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92541656 92561959 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066336.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92541661 92558568 + MGP_BALBcJ_P0066336 Fggy protein_coding protein_coding MGP_BALBcJ_T0066337.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92541666 92730230 + MGP_BALBcJ_P0066337 Fggy protein_coding protein_coding MGP_BALBcJ_T0066338.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92547726 92889636 + MGP_BALBcJ_P0066338 Fggy protein_coding protein_coding MGP_BALBcJ_T0066339.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92547726 92777146 + MGP_BALBcJ_P0066339 Fggy protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066340.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92549397 92700077 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066341.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92584795 92840731 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066342.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92584802 92700134 + MGP_BALBcJ_P0066342 Fggy protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066343.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92598039 92786525 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066344.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92699619 92730239 + Fggy protein_coding processed_transcript MGP_BALBcJ_T0066345.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92730302 92889771 + MGP_BALBcJ_P0066345 Fggy protein_coding protein_coding MGP_BALBcJ_T0066346.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92786520 92889636 + MGP_BALBcJ_P0066346 Fggy protein_coding protein_coding MGP_BALBcJ_T0066347.1 MGP_BALBcJ_G0028438.1 mouse_genomes_project 4 92813555 92889766 + MGP_BALBcJ_P0066347 Fggy protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065761.1 MGP_BALBcJ_G0028288.1 mouse_genomes_project 4 53536007 53537315 + MGP_BALBcJ_P0065761 Gm26657 protein_coding protein_coding MGP_BALBcJ_T0067866.1 MGP_BALBcJ_G0028781.1 mouse_genomes_project 4 124580518 124583891 - MGP_BALBcJ_P0067866 Gjb5 protein_coding protein_coding MGP_BALBcJ_T0007967.1 MGP_BALBcJ_G0006499.1 mouse_genomes_project 4 131039690 131040881 + Gm12974 lincRNA lincRNA MGP_BALBcJ_T0007792.1 MGP_BALBcJ_G0006366.1 mouse_genomes_project 4 23171534 23243186 - 4930548K13Rik lincRNA lincRNA MGP_BALBcJ_T0068690.1 MGP_BALBcJ_G0028955.1 mouse_genomes_project 4 133957456 134151205 - MGP_BALBcJ_P0068690 Ephb2 protein_coding protein_coding MGP_BALBcJ_T0068691.1 MGP_BALBcJ_G0028955.1 mouse_genomes_project 4 133963527 134151173 - MGP_BALBcJ_P0068691 Ephb2 protein_coding protein_coding MGP_BALBcJ_T0068692.1 MGP_BALBcJ_G0028955.1 mouse_genomes_project 4 133964568 134151060 - MGP_BALBcJ_P0068692 Ephb2 protein_coding protein_coding MGP_BALBcJ_T0068693.1 MGP_BALBcJ_G0028955.1 mouse_genomes_project 4 133969645 133971899 - Ephb2 protein_coding retained_intron MGP_BALBcJ_T0068694.1 MGP_BALBcJ_G0028955.1 mouse_genomes_project 4 133971709 134004832 - MGP_BALBcJ_P0068694 Ephb2 protein_coding protein_coding MGP_BALBcJ_T0068695.1 MGP_BALBcJ_G0028955.1 mouse_genomes_project 4 134083375 134151191 - Ephb2 protein_coding retained_intron MGP_BALBcJ_T0065210.1 MGP_BALBcJ_G0028170.1 mouse_genomes_project 4 39675192 39676023 + Dnajb5 protein_coding processed_transcript MGP_BALBcJ_T0065211.1 MGP_BALBcJ_G0028170.1 mouse_genomes_project 4 39675629 39684363 + Dnajb5 protein_coding retained_intron MGP_BALBcJ_T0065212.1 MGP_BALBcJ_G0028170.1 mouse_genomes_project 4 39675718 39678581 + Dnajb5 protein_coding processed_transcript MGP_BALBcJ_T0065213.1 MGP_BALBcJ_G0028170.1 mouse_genomes_project 4 39676040 39683183 + MGP_BALBcJ_P0065213 Dnajb5 protein_coding protein_coding MGP_BALBcJ_T0065214.1 MGP_BALBcJ_G0028170.1 mouse_genomes_project 4 39678372 39684354 + MGP_BALBcJ_P0065214 Dnajb5 protein_coding protein_coding MGP_BALBcJ_T0099852.1 MGP_BALBcJ_G0037888.1 mouse_genomes_project 4 96902788 96902870 + Gm26425 snRNA snRNA MGP_BALBcJ_T0010604.1 MGP_BALBcJ_G0008729.1 mouse_genomes_project 4 121915542 121915651 + Mir698 miRNA miRNA MGP_BALBcJ_T0014714.1 MGP_BALBcJ_G0012811.1 mouse_genomes_project 4 115866453 115866948 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014381.1 MGP_BALBcJ_G0012478.1 mouse_genomes_project 4 5132422 5133372 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102507.1 MGP_BALBcJ_G0040323.1 mouse_genomes_project 4 40519978 40520926 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014554.1 MGP_BALBcJ_G0012651.1 mouse_genomes_project 4 55916101 55916846 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069183.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145968903 145986034 + MGP_BALBcJ_P0069183 Mthfr protein_coding protein_coding MGP_BALBcJ_T0069184.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145968985 145974381 + MGP_BALBcJ_P0069184 Mthfr protein_coding protein_coding MGP_BALBcJ_T0069185.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145970636 145973275 + Mthfr protein_coding retained_intron MGP_BALBcJ_T0069186.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145971017 145989379 + MGP_BALBcJ_P0069186 Mthfr protein_coding protein_coding MGP_BALBcJ_T0069187.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145971113 145989379 + MGP_BALBcJ_P0069187 Mthfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069188.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145971428 145973783 + Mthfr protein_coding retained_intron MGP_BALBcJ_T0069189.1 MGP_BALBcJ_G0029096.1 mouse_genomes_project 4 145982504 145989376 + MGP_BALBcJ_P0069189 Mthfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066253.1 MGP_BALBcJ_G0028403.1 mouse_genomes_project 4 85559463 85560036 - MGP_BALBcJ_P0066253 Ifna15 protein_coding protein_coding MGP_BALBcJ_T0101114.1 MGP_BALBcJ_G0039150.1 mouse_genomes_project 4 37990145 37990226 - Gm24837 snoRNA snoRNA MGP_BALBcJ_T0014810.1 MGP_BALBcJ_G0012907.1 mouse_genomes_project 4 148209495 148209904 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014689.1 MGP_BALBcJ_G0012786.1 mouse_genomes_project 4 106769396 106769800 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065060.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 37972032 38054256 - MGP_BALBcJ_P0065060 Ubap2 protein_coding protein_coding MGP_BALBcJ_T0065061.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 37972035 38054247 - MGP_BALBcJ_P0065061 Ubap2 protein_coding protein_coding MGP_BALBcJ_T0065062.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 37972912 37973485 - MGP_BALBcJ_P0065062 Ubap2 protein_coding protein_coding MGP_BALBcJ_T0065063.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 37976937 37977797 - Ubap2 protein_coding processed_transcript MGP_BALBcJ_T0065064.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 37985537 37992472 - MGP_BALBcJ_P0065064 Ubap2 protein_coding protein_coding MGP_BALBcJ_T0065065.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 38000246 38030259 - MGP_BALBcJ_P0065065 Ubap2 protein_coding protein_coding MGP_BALBcJ_T0065066.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 38000249 38054228 - Ubap2 protein_coding processed_transcript MGP_BALBcJ_T0065067.1 MGP_BALBcJ_G0028127.1 mouse_genomes_project 4 38053177 38054239 - Ubap2 protein_coding processed_transcript MGP_BALBcJ_T0014791.1 MGP_BALBcJ_G0012888.1 mouse_genomes_project 4 141267681 141267937 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018002.1 MGP_BALBcJ_G0015479.1 mouse_genomes_project 4 31604326 31609684 - Platr9 processed_transcript processed_transcript MGP_BALBcJ_T0018003.1 MGP_BALBcJ_G0015479.1 mouse_genomes_project 4 31607991 31609684 - Platr9 processed_transcript processed_transcript MGP_BALBcJ_T0069070.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139573468 139691247 - MGP_BALBcJ_P0069070 protein_coding protein_coding MGP_BALBcJ_T0069071.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139583351 139589246 - protein_coding processed_transcript MGP_BALBcJ_T0069072.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139589367 139635851 - MGP_BALBcJ_P0069072 protein_coding protein_coding MGP_BALBcJ_T0069073.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139611509 139721904 - MGP_BALBcJ_P0069073 protein_coding protein_coding MGP_BALBcJ_T0069074.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139611516 139691149 - MGP_BALBcJ_P0069074 protein_coding protein_coding MGP_BALBcJ_T0069075.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139611517 139618728 - protein_coding retained_intron MGP_BALBcJ_T0069076.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139613815 139691247 - MGP_BALBcJ_P0069076 protein_coding protein_coding MGP_BALBcJ_T0069077.1 MGP_BALBcJ_G0029048.1 mouse_genomes_project 4 139619032 139626907 - protein_coding retained_intron MGP_BALBcJ_T0067897.1 MGP_BALBcJ_G0028789.1 mouse_genomes_project 4 126019339 126052778 - MGP_BALBcJ_P0067897 Zfp362 protein_coding protein_coding MGP_BALBcJ_T0067898.1 MGP_BALBcJ_G0028789.1 mouse_genomes_project 4 126019355 126041186 - MGP_BALBcJ_P0067898 Zfp362 protein_coding protein_coding MGP_BALBcJ_T0067899.1 MGP_BALBcJ_G0028789.1 mouse_genomes_project 4 126023335 126052778 - MGP_BALBcJ_P0067899 Zfp362 protein_coding protein_coding MGP_BALBcJ_T0067900.1 MGP_BALBcJ_G0028789.1 mouse_genomes_project 4 126035577 126036349 - Zfp362 protein_coding processed_transcript MGP_BALBcJ_T0099877.1 MGP_BALBcJ_G0037913.1 mouse_genomes_project 4 127187387 127187539 + Gm23845 snRNA snRNA MGP_BALBcJ_T0067868.1 MGP_BALBcJ_G0028783.1 mouse_genomes_project 4 125223380 125585505 + Csmd2 protein_coding processed_transcript MGP_BALBcJ_T0067869.1 MGP_BALBcJ_G0028783.1 mouse_genomes_project 4 125223560 125664516 + Csmd2 protein_coding retained_intron MGP_BALBcJ_T0067870.1 MGP_BALBcJ_G0028783.1 mouse_genomes_project 4 125223586 125805132 + MGP_BALBcJ_P0067870 Csmd2 protein_coding protein_coding MGP_BALBcJ_T0067872.1 MGP_BALBcJ_G0028783.1 mouse_genomes_project 4 125715087 125738333 + Csmd2 protein_coding processed_transcript MGP_BALBcJ_T0067873.1 MGP_BALBcJ_G0028783.1 mouse_genomes_project 4 125756758 125765892 + Csmd2 protein_coding processed_transcript MGP_BALBcJ_T0067874.1 MGP_BALBcJ_G0028783.1 mouse_genomes_project 4 125785417 125790219 + Csmd2 protein_coding processed_transcript MGP_BALBcJ_T0066371.1 MGP_BALBcJ_G0028447.1 mouse_genomes_project 4 93605398 93638832 - MGP_BALBcJ_P0066371 Cyp2j5 protein_coding protein_coding MGP_BALBcJ_T0007837.1 MGP_BALBcJ_G0006404.1 mouse_genomes_project 4 56087760 56090858 + Gm12596 lincRNA lincRNA MGP_BALBcJ_T0066369.1 MGP_BALBcJ_G0028446.1 mouse_genomes_project 4 93535443 93558492 - MGP_BALBcJ_P0066369 Cyp2j9 protein_coding protein_coding MGP_BALBcJ_T0066370.1 MGP_BALBcJ_G0028446.1 mouse_genomes_project 4 93543235 93558492 - Cyp2j9 protein_coding retained_intron MGP_BALBcJ_T0067434.1 MGP_BALBcJ_G0028673.1 mouse_genomes_project 4 116264714 116270490 + MGP_BALBcJ_P0067434 Svbp protein_coding protein_coding MGP_BALBcJ_T0067435.1 MGP_BALBcJ_G0028673.1 mouse_genomes_project 4 116264815 116270490 + MGP_BALBcJ_P0067435 Svbp protein_coding protein_coding MGP_BALBcJ_T0067436.1 MGP_BALBcJ_G0028673.1 mouse_genomes_project 4 116264904 116270490 + MGP_BALBcJ_P0067436 Svbp protein_coding protein_coding MGP_BALBcJ_T0066578.1 MGP_BALBcJ_G0028490.1 mouse_genomes_project 4 100306885 100361272 + MGP_BALBcJ_P0066578 Oma1 protein_coding protein_coding MGP_BALBcJ_T0066579.1 MGP_BALBcJ_G0028490.1 mouse_genomes_project 4 100317661 100325810 + Oma1 protein_coding processed_transcript MGP_BALBcJ_T0066580.1 MGP_BALBcJ_G0028490.1 mouse_genomes_project 4 100325828 100366697 + Oma1 protein_coding processed_transcript MGP_BALBcJ_T0067050.1 MGP_BALBcJ_G0028589.1 mouse_genomes_project 4 112801752 112802937 - MGP_BALBcJ_P0067050 Tex38 protein_coding protein_coding MGP_BALBcJ_T0007794.1 MGP_BALBcJ_G0006368.1 mouse_genomes_project 4 25691288 25692346 + Gm11916 lincRNA lincRNA MGP_BALBcJ_T0001408.1 MGP_BALBcJ_G0001330.1 mouse_genomes_project 4 41447601 41449912 + TEC TEC MGP_BALBcJ_T0065840.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55621555 55739569 - MGP_BALBcJ_P0065840 AI314180 protein_coding protein_coding MGP_BALBcJ_T0065841.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55635909 55637131 - AI314180 protein_coding processed_transcript MGP_BALBcJ_T0065842.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55636715 55738762 - MGP_BALBcJ_P0065842 AI314180 protein_coding protein_coding MGP_BALBcJ_T0065843.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55640558 55644817 - AI314180 protein_coding processed_transcript MGP_BALBcJ_T0065844.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55644567 55659275 - AI314180 protein_coding processed_transcript MGP_BALBcJ_T0065845.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55655753 55738759 - MGP_BALBcJ_P0065845 AI314180 protein_coding protein_coding MGP_BALBcJ_T0065846.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55657912 55660124 - AI314180 protein_coding processed_transcript MGP_BALBcJ_T0065847.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55661303 55670159 - AI314180 protein_coding processed_transcript MGP_BALBcJ_T0065848.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55669408 55739524 - MGP_BALBcJ_P0065848 AI314180 protein_coding protein_coding MGP_BALBcJ_T0065849.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55687724 55739569 - MGP_BALBcJ_P0065849 AI314180 protein_coding protein_coding MGP_BALBcJ_T0065850.1 MGP_BALBcJ_G0028307.1 mouse_genomes_project 4 55696297 55738734 - MGP_BALBcJ_P0065850 AI314180 protein_coding protein_coding MGP_BALBcJ_T0067547.1 MGP_BALBcJ_G0028698.1 mouse_genomes_project 4 117942884 117972672 + Rims3 protein_coding processed_transcript MGP_BALBcJ_T0067548.1 MGP_BALBcJ_G0028698.1 mouse_genomes_project 4 117942887 117984717 + MGP_BALBcJ_P0067548 Rims3 protein_coding protein_coding MGP_BALBcJ_T0067549.1 MGP_BALBcJ_G0028698.1 mouse_genomes_project 4 117950231 117984717 + MGP_BALBcJ_P0067549 Rims3 protein_coding protein_coding MGP_BALBcJ_T0067550.1 MGP_BALBcJ_G0028698.1 mouse_genomes_project 4 117966067 117979698 + MGP_BALBcJ_P0067550 Rims3 protein_coding protein_coding MGP_BALBcJ_T0067934.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126399984 126441282 - MGP_BALBcJ_P0067934 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067935.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126399984 126441245 - MGP_BALBcJ_P0067935 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067936.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126399984 126441430 - MGP_BALBcJ_P0067936 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067937.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126401351 126434233 - MGP_BALBcJ_P0067937 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067938.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126402526 126441280 - S100pbp protein_coding processed_transcript MGP_BALBcJ_T0067939.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126402805 126441280 - S100pbp protein_coding retained_intron MGP_BALBcJ_T0067940.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126402805 126432125 - S100pbp protein_coding retained_intron MGP_BALBcJ_T0067941.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126403011 126441215 - MGP_BALBcJ_P0067941 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067942.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126403011 126441312 - MGP_BALBcJ_P0067942 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067943.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126415123 126441320 - S100pbp protein_coding processed_transcript MGP_BALBcJ_T0067944.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126420353 126430336 - S100pbp protein_coding processed_transcript MGP_BALBcJ_T0067945.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126429195 126441329 - MGP_BALBcJ_P0067945 S100pbp protein_coding protein_coding MGP_BALBcJ_T0067946.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126433444 126441373 - S100pbp protein_coding processed_transcript MGP_BALBcJ_T0067947.1 MGP_BALBcJ_G0028797.1 mouse_genomes_project 4 126433502 126441201 - S100pbp protein_coding processed_transcript MGP_BALBcJ_T0010607.1 MGP_BALBcJ_G0008732.1 mouse_genomes_project 4 126839570 126839699 - Mir8119 miRNA miRNA MGP_BALBcJ_T0067883.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125898104 125996785 + MGP_BALBcJ_P0067883 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067884.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125898140 125955756 + MGP_BALBcJ_P0067884 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067885.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125932277 125949225 + Phc2 protein_coding retained_intron MGP_BALBcJ_T0067886.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125932334 125996785 + MGP_BALBcJ_P0067886 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067887.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125953725 125968006 + Phc2 protein_coding retained_intron MGP_BALBcJ_T0067888.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125971157 125996785 + MGP_BALBcJ_P0067888 Phc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067889.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125971258 125992125 + MGP_BALBcJ_P0067889 Phc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067890.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125971286 125988922 + MGP_BALBcJ_P0067890 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067891.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125971509 125991982 + MGP_BALBcJ_P0067891 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067892.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125971547 125987385 + MGP_BALBcJ_P0067892 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067893.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125971558 125991040 + MGP_BALBcJ_P0067893 Phc2 protein_coding protein_coding MGP_BALBcJ_T0067894.1 MGP_BALBcJ_G0028787.1 mouse_genomes_project 4 125986598 125996787 + MGP_BALBcJ_P0067894 Phc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0014809.1 MGP_BALBcJ_G0012906.1 mouse_genomes_project 4 147778423 147778980 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064891.1 MGP_BALBcJ_G0028082.1 mouse_genomes_project 4 29458331 29459463 + MGP_BALBcJ_P0064891 Lyrm2 protein_coding protein_coding MGP_BALBcJ_T0064892.1 MGP_BALBcJ_G0028082.1 mouse_genomes_project 4 29458357 29459639 + Lyrm2 protein_coding retained_intron MGP_BALBcJ_T0064893.1 MGP_BALBcJ_G0028082.1 mouse_genomes_project 4 29458360 29459055 + Lyrm2 protein_coding retained_intron MGP_BALBcJ_T0018072.1 MGP_BALBcJ_G0015521.1 mouse_genomes_project 4 150379627 150381051 - Gm13645 processed_transcript processed_transcript MGP_BALBcJ_T0067411.1 MGP_BALBcJ_G0028665.1 mouse_genomes_project 4 115950568 115951660 + MGP_BALBcJ_P0067411 Olfr1330 protein_coding protein_coding MGP_BALBcJ_T0014584.1 MGP_BALBcJ_G0012681.1 mouse_genomes_project 4 71604775 71605993 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066507.1 MGP_BALBcJ_G0028477.1 mouse_genomes_project 4 98859129 98862880 - MGP_BALBcJ_P0066507 C130073F10Rik protein_coding protein_coding MGP_BALBcJ_T0018082.1 MGP_BALBcJ_G0015527.1 mouse_genomes_project 4 154138621 154145762 - Gm13648 processed_transcript processed_transcript MGP_BALBcJ_T0064674.1 MGP_BALBcJ_G0028025.1 mouse_genomes_project 4 8172918 8183212 + MGP_BALBcJ_P0064674 Gem protein_coding protein_coding MGP_BALBcJ_T0064675.1 MGP_BALBcJ_G0028025.1 mouse_genomes_project 4 8174268 8183212 + MGP_BALBcJ_P0064675 Gem protein_coding protein_coding MGP_BALBcJ_T0014674.1 MGP_BALBcJ_G0012771.1 mouse_genomes_project 4 103129885 103131553 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007885.1 MGP_BALBcJ_G0006445.1 mouse_genomes_project 4 100216049 100218260 + Gm44037 lincRNA lincRNA MGP_BALBcJ_T0065858.1 MGP_BALBcJ_G0028312.1 mouse_genomes_project 4 55861057 55868017 + MGP_BALBcJ_P0065858 Gng10 protein_coding protein_coding MGP_BALBcJ_T0065859.1 MGP_BALBcJ_G0028312.1 mouse_genomes_project 4 55861741 55868017 + Gng10 protein_coding processed_transcript MGP_BALBcJ_T0064913.1 MGP_BALBcJ_G0028090.1 mouse_genomes_project 4 29877439 29901645 + MGP_BALBcJ_P0064913 Srsf12 protein_coding protein_coding MGP_BALBcJ_T0064914.1 MGP_BALBcJ_G0028090.1 mouse_genomes_project 4 29877722 29901655 + MGP_BALBcJ_P0064914 Srsf12 protein_coding protein_coding MGP_BALBcJ_T0004579.1 MGP_BALBcJ_G0003972.1 mouse_genomes_project 4 147433685 147438551 + antisense antisense MGP_BALBcJ_T0067984.1 MGP_BALBcJ_G0028807.1 mouse_genomes_project 4 126764999 126765766 + MGP_BALBcJ_P0067984 Fam229a protein_coding protein_coding MGP_BALBcJ_T0067985.1 MGP_BALBcJ_G0028807.1 mouse_genomes_project 4 126765049 126765766 + Fam229a protein_coding retained_intron MGP_BALBcJ_T0004528.1 MGP_BALBcJ_G0003933.1 mouse_genomes_project 4 127974986 127976906 - Gm26716 antisense antisense MGP_BALBcJ_T0067609.1 MGP_BALBcJ_G0028718.1 mouse_genomes_project 4 120347153 120361921 + MGP_BALBcJ_P0067609 Nt5c1a protein_coding protein_coding MGP_BALBcJ_T0067841.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124265697 124279827 - MGP_BALBcJ_P0067841 Zmym1 protein_coding protein_coding MGP_BALBcJ_T0067842.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124266196 124277674 - MGP_BALBcJ_P0067842 Zmym1 protein_coding protein_coding MGP_BALBcJ_T0067843.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124266245 124279735 - Zmym1 protein_coding processed_transcript MGP_BALBcJ_T0067844.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124266245 124279799 - MGP_BALBcJ_P0067844 Zmym1 protein_coding protein_coding MGP_BALBcJ_T0067845.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124267268 124277569 - Zmym1 protein_coding processed_transcript MGP_BALBcJ_T0067846.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124272891 124276263 - Zmym1 protein_coding processed_transcript MGP_BALBcJ_T0067847.1 MGP_BALBcJ_G0028773.1 mouse_genomes_project 4 124272930 124279761 - MGP_BALBcJ_P0067847 Zmym1 protein_coding protein_coding MGP_BALBcJ_T0065191.1 MGP_BALBcJ_G0028163.1 mouse_genomes_project 4 39424250 39573336 + MGP_BALBcJ_P0065191 4930578G10Rik protein_coding protein_coding MGP_BALBcJ_T0065192.1 MGP_BALBcJ_G0028163.1 mouse_genomes_project 4 39424275 39573588 + MGP_BALBcJ_P0065192 4930578G10Rik protein_coding protein_coding MGP_BALBcJ_T0067895.1 MGP_BALBcJ_G0028788.1 mouse_genomes_project 4 125999160 126014810 + MGP_BALBcJ_P0067895 A3galt2 protein_coding protein_coding MGP_BALBcJ_T0067896.1 MGP_BALBcJ_G0028788.1 mouse_genomes_project 4 126003054 126015520 + MGP_BALBcJ_P0067896 A3galt2 protein_coding protein_coding MGP_BALBcJ_T0014670.1 MGP_BALBcJ_G0012767.1 mouse_genomes_project 4 102373015 102373508 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099882.1 MGP_BALBcJ_G0037918.1 mouse_genomes_project 4 131021404 131021547 - Gm25270 snRNA snRNA MGP_BALBcJ_T0101166.1 MGP_BALBcJ_G0039202.1 mouse_genomes_project 4 124082407 124082540 - Gm25604 snoRNA snoRNA MGP_BALBcJ_T0010628.1 MGP_BALBcJ_G0008753.1 mouse_genomes_project 4 137378093 137378188 - Mir2139 miRNA miRNA MGP_BALBcJ_T0066396.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95375143 95390845 + Inadl protein_coding processed_transcript MGP_BALBcJ_T0066397.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95375149 95701001 + MGP_BALBcJ_P0066397 Inadl protein_coding protein_coding MGP_BALBcJ_T0066398.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95375213 95538362 + MGP_BALBcJ_P0066398 Inadl protein_coding protein_coding MGP_BALBcJ_T0066399.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95375213 95657014 + MGP_BALBcJ_P0066399 Inadl protein_coding protein_coding MGP_BALBcJ_T0066400.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95375250 95446498 + MGP_BALBcJ_P0066400 Inadl protein_coding protein_coding MGP_BALBcJ_T0066401.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95401764 95417394 + Inadl protein_coding processed_transcript MGP_BALBcJ_T0066402.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95422474 95427536 + Inadl protein_coding processed_transcript MGP_BALBcJ_T0066403.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95427474 95488275 + MGP_BALBcJ_P0066403 Inadl protein_coding protein_coding MGP_BALBcJ_T0066404.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95436968 95699756 + MGP_BALBcJ_P0066404 Inadl protein_coding protein_coding MGP_BALBcJ_T0066405.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95485697 95498821 + Inadl protein_coding processed_transcript MGP_BALBcJ_T0066406.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95509597 95522911 + MGP_BALBcJ_P0066406 Inadl protein_coding protein_coding MGP_BALBcJ_T0066407.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95530443 95701001 + MGP_BALBcJ_P0066407 Inadl protein_coding protein_coding MGP_BALBcJ_T0066408.1 MGP_BALBcJ_G0028453.1 mouse_genomes_project 4 95530682 95671567 + MGP_BALBcJ_P0066408 Inadl protein_coding protein_coding MGP_BALBcJ_T0014719.1 MGP_BALBcJ_G0012816.1 mouse_genomes_project 4 116612176 116613133 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065809.1 MGP_BALBcJ_G0028299.1 mouse_genomes_project 4 54536081 54677127 + protein_coding processed_transcript MGP_BALBcJ_T0065810.1 MGP_BALBcJ_G0028299.1 mouse_genomes_project 4 54570903 54716961 + MGP_BALBcJ_P0065810 protein_coding protein_coding MGP_BALBcJ_T0065811.1 MGP_BALBcJ_G0028299.1 mouse_genomes_project 4 54602203 54675407 + MGP_BALBcJ_P0065811 protein_coding protein_coding MGP_BALBcJ_T0065812.1 MGP_BALBcJ_G0028299.1 mouse_genomes_project 4 54649125 54675254 + MGP_BALBcJ_P0065812 protein_coding protein_coding MGP_BALBcJ_T0065010.1 MGP_BALBcJ_G0028114.1 mouse_genomes_project 4 37221226 37226180 + MGP_BALBcJ_P0065010 Tmem215 protein_coding protein_coding MGP_BALBcJ_T0065011.1 MGP_BALBcJ_G0028114.1 mouse_genomes_project 4 37222176 37224665 + MGP_BALBcJ_P0065011 Tmem215 protein_coding protein_coding MGP_BALBcJ_T0011540.1 MGP_BALBcJ_G0009665.1 mouse_genomes_project 4 31377779 31378086 + Gm22849 misc_RNA misc_RNA MGP_BALBcJ_T0001418.1 MGP_BALBcJ_G0001340.1 mouse_genomes_project 4 129038030 129042640 + TEC TEC MGP_BALBcJ_T0067000.1 MGP_BALBcJ_G0028572.1 mouse_genomes_project 4 111890949 111893529 - MGP_BALBcJ_P0067000 Foxd2 protein_coding protein_coding MGP_BALBcJ_T0066314.1 MGP_BALBcJ_G0028434.1 mouse_genomes_project 4 91729772 91854402 + MGP_BALBcJ_P0066314 Tek protein_coding protein_coding MGP_BALBcJ_T0066315.1 MGP_BALBcJ_G0028434.1 mouse_genomes_project 4 91729783 91854365 + MGP_BALBcJ_P0066315 Tek protein_coding protein_coding MGP_BALBcJ_T0066316.1 MGP_BALBcJ_G0028434.1 mouse_genomes_project 4 91730001 91854108 + MGP_BALBcJ_P0066316 Tek protein_coding protein_coding MGP_BALBcJ_T0066317.1 MGP_BALBcJ_G0028434.1 mouse_genomes_project 4 91792276 91801328 + Tek protein_coding processed_transcript MGP_BALBcJ_T0066257.1 MGP_BALBcJ_G0028407.1 mouse_genomes_project 4 85619287 85628003 - MGP_BALBcJ_P0066257 C87499 protein_coding protein_coding MGP_BALBcJ_T0066258.1 MGP_BALBcJ_G0028407.1 mouse_genomes_project 4 85619287 85627955 - MGP_BALBcJ_P0066258 C87499 protein_coding protein_coding MGP_BALBcJ_T0066259.1 MGP_BALBcJ_G0028407.1 mouse_genomes_project 4 85620136 85628155 - MGP_BALBcJ_P0066259 C87499 protein_coding protein_coding MGP_BALBcJ_T0066260.1 MGP_BALBcJ_G0028407.1 mouse_genomes_project 4 85620865 85627886 - MGP_BALBcJ_P0066260 C87499 protein_coding protein_coding MGP_BALBcJ_T0066261.1 MGP_BALBcJ_G0028407.1 mouse_genomes_project 4 85621155 85627935 - MGP_BALBcJ_P0066261 C87499 protein_coding protein_coding MGP_BALBcJ_T0007879.1 MGP_BALBcJ_G0006441.1 mouse_genomes_project 4 98241031 98270735 - Gm12796 lincRNA lincRNA MGP_BALBcJ_T0014669.1 MGP_BALBcJ_G0012766.1 mouse_genomes_project 4 101968579 101968847 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068367.1 MGP_BALBcJ_G0028883.1 mouse_genomes_project 4 130815497 130818552 - MGP_BALBcJ_P0068367 Sfn protein_coding protein_coding MGP_BALBcJ_T0066255.1 MGP_BALBcJ_G0028405.1 mouse_genomes_project 4 85584882 85585455 - MGP_BALBcJ_P0066255 Ifna9 protein_coding protein_coding MGP_BALBcJ_T0066581.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 100617148 101178191 + Dab1 protein_coding processed_transcript MGP_BALBcJ_T0066582.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 100617454 101679316 + MGP_BALBcJ_P0066582 Dab1 protein_coding protein_coding MGP_BALBcJ_T0066583.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 101360823 101678430 + MGP_BALBcJ_P0066583 Dab1 protein_coding protein_coding MGP_BALBcJ_T0066584.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 101361299 101741932 + MGP_BALBcJ_P0066584 Dab1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066585.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 101361299 101744979 + MGP_BALBcJ_P0066585 Dab1 protein_coding protein_coding MGP_BALBcJ_T0066586.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 101506120 101679316 + MGP_BALBcJ_P0066586 Dab1 protein_coding protein_coding MGP_BALBcJ_T0066587.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 101589634 101677726 + Dab1 protein_coding processed_transcript MGP_BALBcJ_T0066588.1 MGP_BALBcJ_G0028491.1 mouse_genomes_project 4 101603704 101713874 + MGP_BALBcJ_P0066588 Dab1 protein_coding protein_coding MGP_BALBcJ_T0001421.1 MGP_BALBcJ_G0001343.1 mouse_genomes_project 4 133949098 133951989 + TEC TEC MGP_BALBcJ_T0014734.1 MGP_BALBcJ_G0012831.1 mouse_genomes_project 4 120420190 120420763 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069301.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147127157 147258949 - MGP_BALBcJ_P0069301 Kif1b protein_coding protein_coding MGP_BALBcJ_T0069302.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147128856 147137039 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069303.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147129701 147149300 - MGP_BALBcJ_P0069303 Kif1b protein_coding protein_coding MGP_BALBcJ_T0069304.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147131074 147258763 - MGP_BALBcJ_P0069304 Kif1b protein_coding protein_coding MGP_BALBcJ_T0069305.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147157010 147160735 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069306.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147157409 147164382 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069307.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147165562 147174076 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069308.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147184327 147258880 - MGP_BALBcJ_P0069308 Kif1b protein_coding protein_coding MGP_BALBcJ_T0069309.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147187601 147258984 - MGP_BALBcJ_P0069309 Kif1b protein_coding unknown_likely_coding MGP_BALBcJ_T0069310.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147195949 147198573 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069311.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147215279 147258950 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069312.1 MGP_BALBcJ_G0029118.1 mouse_genomes_project 4 147242146 147258921 - Kif1b protein_coding retained_intron MGP_BALBcJ_T0069208.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146081873 146088928 - MGP_BALBcJ_P0069208 Fbxo44 protein_coding protein_coding MGP_BALBcJ_T0069209.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146081876 146089427 - MGP_BALBcJ_P0069209 Fbxo44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069210.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146081876 146089416 - MGP_BALBcJ_P0069210 Fbxo44 protein_coding protein_coding MGP_BALBcJ_T0069211.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146082340 146089210 - MGP_BALBcJ_P0069211 Fbxo44 protein_coding protein_coding MGP_BALBcJ_T0069212.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146082610 146087947 - MGP_BALBcJ_P0069212 Fbxo44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069213.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146082645 146088982 - MGP_BALBcJ_P0069213 Fbxo44 protein_coding protein_coding MGP_BALBcJ_T0069214.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146082645 146089208 - MGP_BALBcJ_P0069214 Fbxo44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069215.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146084571 146089184 - MGP_BALBcJ_P0069215 Fbxo44 protein_coding protein_coding MGP_BALBcJ_T0069216.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146085219 146089182 - MGP_BALBcJ_P0069216 Fbxo44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069217.1 MGP_BALBcJ_G0029101.1 mouse_genomes_project 4 146085239 146089815 - MGP_BALBcJ_P0069217 Fbxo44 protein_coding protein_coding MGP_BALBcJ_T0004585.1 MGP_BALBcJ_G0003977.1 mouse_genomes_project 4 148822400 148849820 - 1700045H11Rik antisense antisense MGP_BALBcJ_T0069832.1 MGP_BALBcJ_G0029212.1 mouse_genomes_project 4 153922356 153923817 + MGP_BALBcJ_P0069832 Aurkaip1 protein_coding protein_coding MGP_BALBcJ_T0069833.1 MGP_BALBcJ_G0029212.1 mouse_genomes_project 4 153922435 153924209 + MGP_BALBcJ_P0069833 Aurkaip1 protein_coding protein_coding MGP_BALBcJ_T0069834.1 MGP_BALBcJ_G0029212.1 mouse_genomes_project 4 153922697 153923543 + Aurkaip1 protein_coding retained_intron MGP_BALBcJ_T0069835.1 MGP_BALBcJ_G0029212.1 mouse_genomes_project 4 153922737 153924140 + MGP_BALBcJ_P0069835 Aurkaip1 protein_coding protein_coding MGP_BALBcJ_T0069836.1 MGP_BALBcJ_G0029212.1 mouse_genomes_project 4 153922743 153923607 + Aurkaip1 protein_coding processed_transcript MGP_BALBcJ_T0069837.1 MGP_BALBcJ_G0029212.1 mouse_genomes_project 4 153922747 153924110 + MGP_BALBcJ_P0069837 Aurkaip1 protein_coding protein_coding MGP_BALBcJ_T0069708.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153167699 153227752 + MGP_BALBcJ_P0069708 Morn1 protein_coding protein_coding MGP_BALBcJ_T0069709.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153167699 153194656 + MGP_BALBcJ_P0069709 Morn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069710.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153167711 153174967 + MGP_BALBcJ_P0069710 Morn1 protein_coding protein_coding MGP_BALBcJ_T0069711.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153167725 153175248 + MGP_BALBcJ_P0069711 Morn1 protein_coding protein_coding MGP_BALBcJ_T0069712.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153167736 153222978 + Morn1 protein_coding processed_transcript MGP_BALBcJ_T0069713.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153167750 153222956 + Morn1 protein_coding processed_transcript MGP_BALBcJ_T0069714.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153184065 153211614 + Morn1 protein_coding retained_intron MGP_BALBcJ_T0069715.1 MGP_BALBcJ_G0029189.1 mouse_genomes_project 4 153193164 153211178 + Morn1 protein_coding retained_intron MGP_BALBcJ_T0018009.1 MGP_BALBcJ_G0015483.1 mouse_genomes_project 4 42524050 42525897 - Gm12409 processed_transcript processed_transcript MGP_BALBcJ_T0069333.1 MGP_BALBcJ_G0029122.1 mouse_genomes_project 4 147440248 147443121 + MGP_BALBcJ_P0069333 Lzic protein_coding protein_coding MGP_BALBcJ_T0069334.1 MGP_BALBcJ_G0029122.1 mouse_genomes_project 4 147440250 147443149 + MGP_BALBcJ_P0069334 Lzic protein_coding protein_coding MGP_BALBcJ_T0069335.1 MGP_BALBcJ_G0029122.1 mouse_genomes_project 4 147440259 147440761 + Lzic protein_coding processed_transcript MGP_BALBcJ_T0069336.1 MGP_BALBcJ_G0029122.1 mouse_genomes_project 4 147440313 147451582 + MGP_BALBcJ_P0069336 Lzic protein_coding protein_coding MGP_BALBcJ_T0069337.1 MGP_BALBcJ_G0029122.1 mouse_genomes_project 4 147440352 147441023 + Lzic protein_coding processed_transcript MGP_BALBcJ_T0064708.1 MGP_BALBcJ_G0028034.1 mouse_genomes_project 4 10212477 10362884 + MGP_BALBcJ_P0064708 Runx1t1 protein_coding protein_coding MGP_BALBcJ_T0064709.1 MGP_BALBcJ_G0028034.1 mouse_genomes_project 4 10220351 10312361 + Runx1t1 protein_coding processed_transcript MGP_BALBcJ_T0064710.1 MGP_BALBcJ_G0028034.1 mouse_genomes_project 4 10220351 10362863 + MGP_BALBcJ_P0064710 Runx1t1 protein_coding protein_coding MGP_BALBcJ_T0064711.1 MGP_BALBcJ_G0028034.1 mouse_genomes_project 4 10240990 10359546 + MGP_BALBcJ_P0064711 Runx1t1 protein_coding protein_coding MGP_BALBcJ_T0064712.1 MGP_BALBcJ_G0028034.1 mouse_genomes_project 4 10254398 10360339 + MGP_BALBcJ_P0064712 Runx1t1 protein_coding protein_coding MGP_BALBcJ_T0064713.1 MGP_BALBcJ_G0028034.1 mouse_genomes_project 4 10358442 10359185 + Runx1t1 protein_coding processed_transcript MGP_BALBcJ_T0014549.1 MGP_BALBcJ_G0012646.1 mouse_genomes_project 4 53197312 53198091 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007855.1 MGP_BALBcJ_G0006420.1 mouse_genomes_project 4 80822489 80826606 - Gm11415 lincRNA lincRNA MGP_BALBcJ_T0065285.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40109974 40155223 + MGP_BALBcJ_P0065285 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065286.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40110052 40142934 + MGP_BALBcJ_P0065286 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065287.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40110065 40144328 + Rusc2 protein_coding processed_transcript MGP_BALBcJ_T0065288.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40111438 40142978 + MGP_BALBcJ_P0065288 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065289.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40111499 40142893 + MGP_BALBcJ_P0065289 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065290.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40112271 40150054 + Rusc2 protein_coding processed_transcript MGP_BALBcJ_T0065291.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40112324 40143031 + MGP_BALBcJ_P0065291 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065292.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40129332 40155208 + Rusc2 protein_coding retained_intron MGP_BALBcJ_T0065293.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40129347 40142877 + MGP_BALBcJ_P0065293 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065294.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40134526 40155223 + MGP_BALBcJ_P0065294 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065295.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40134593 40150590 + Rusc2 protein_coding processed_transcript MGP_BALBcJ_T0065296.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40134648 40143317 + MGP_BALBcJ_P0065296 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065297.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40135428 40149937 + MGP_BALBcJ_P0065297 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065298.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40142833 40154784 + MGP_BALBcJ_P0065298 Rusc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065299.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40142833 40155223 + MGP_BALBcJ_P0065299 Rusc2 protein_coding protein_coding MGP_BALBcJ_T0065300.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40144575 40154500 + Rusc2 protein_coding processed_transcript MGP_BALBcJ_T0065301.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40150626 40152508 + Rusc2 protein_coding retained_intron MGP_BALBcJ_T0065302.1 MGP_BALBcJ_G0028179.1 mouse_genomes_project 4 40151725 40152146 + Rusc2 protein_coding retained_intron MGP_BALBcJ_T0098943.1 MGP_BALBcJ_G0036990.1 mouse_genomes_project 4 80683123 80683604 + Gm26968 sense_intronic sense_intronic MGP_BALBcJ_T0014504.1 MGP_BALBcJ_G0012601.1 mouse_genomes_project 4 38031256 38031484 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066620.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103655332 103672060 - MGP_BALBcJ_P0066620 Ttc4 protein_coding protein_coding MGP_BALBcJ_T0066621.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103655336 103671802 - Ttc4 protein_coding processed_transcript MGP_BALBcJ_T0066622.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103655509 103660650 - Ttc4 protein_coding processed_transcript MGP_BALBcJ_T0066623.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103656140 103671982 - MGP_BALBcJ_P0066623 Ttc4 protein_coding protein_coding MGP_BALBcJ_T0066624.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103660746 103664810 - Ttc4 protein_coding processed_transcript MGP_BALBcJ_T0066625.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103661249 103664158 - Ttc4 protein_coding processed_transcript MGP_BALBcJ_T0066626.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103663589 103672007 - MGP_BALBcJ_P0066626 Ttc4 protein_coding protein_coding MGP_BALBcJ_T0066627.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103664864 103672017 - Ttc4 protein_coding processed_transcript MGP_BALBcJ_T0066628.1 MGP_BALBcJ_G0028506.1 mouse_genomes_project 4 103669405 103672005 - Ttc4 protein_coding processed_transcript MGP_BALBcJ_T0066126.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80153736 80257318 - MGP_BALBcJ_P0066126 Ttc39b protein_coding protein_coding MGP_BALBcJ_T0066127.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80159869 80166662 - Ttc39b protein_coding retained_intron MGP_BALBcJ_T0066128.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80173233 80257302 - MGP_BALBcJ_P0066128 Ttc39b protein_coding protein_coding MGP_BALBcJ_T0066129.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80181026 80199256 - Ttc39b protein_coding processed_transcript MGP_BALBcJ_T0066130.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80186395 80218300 - MGP_BALBcJ_P0066130 Ttc39b protein_coding protein_coding MGP_BALBcJ_T0066131.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80192547 80257252 - MGP_BALBcJ_P0066131 Ttc39b protein_coding protein_coding MGP_BALBcJ_T0066132.1 MGP_BALBcJ_G0028383.1 mouse_genomes_project 4 80192678 80212584 - MGP_BALBcJ_P0066132 Ttc39b protein_coding protein_coding MGP_BALBcJ_T0014424.1 MGP_BALBcJ_G0012521.1 mouse_genomes_project 4 15478300 15479238 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014776.1 MGP_BALBcJ_G0012873.1 mouse_genomes_project 4 134547506 134548154 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064748.1 MGP_BALBcJ_G0028047.1 mouse_genomes_project 4 15368354 15636705 - MGP_BALBcJ_P0064748 Cnbd1 protein_coding protein_coding MGP_BALBcJ_T0069880.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021215 154035821 + MGP_BALBcJ_P0069880 protein_coding protein_coding MGP_BALBcJ_T0069881.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021215 154037830 + MGP_BALBcJ_P0069881 protein_coding protein_coding MGP_BALBcJ_T0069882.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021234 154037830 + MGP_BALBcJ_P0069882 protein_coding protein_coding MGP_BALBcJ_T0069883.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021245 154026747 + MGP_BALBcJ_P0069883 protein_coding protein_coding MGP_BALBcJ_T0069884.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021248 154029147 + protein_coding processed_transcript MGP_BALBcJ_T0069885.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021253 154035821 + MGP_BALBcJ_P0069885 protein_coding protein_coding MGP_BALBcJ_T0069886.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021294 154035206 + MGP_BALBcJ_P0069886 protein_coding protein_coding MGP_BALBcJ_T0069887.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021376 154035675 + MGP_BALBcJ_P0069887 protein_coding protein_coding MGP_BALBcJ_T0069888.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021384 154029311 + protein_coding retained_intron MGP_BALBcJ_T0069889.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021550 154035821 + MGP_BALBcJ_P0069889 protein_coding protein_coding MGP_BALBcJ_T0069890.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154021550 154035824 + MGP_BALBcJ_P0069890 protein_coding protein_coding MGP_BALBcJ_T0069891.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154032947 154034501 + protein_coding retained_intron MGP_BALBcJ_T0069892.1 MGP_BALBcJ_G0029220.1 mouse_genomes_project 4 154034110 154035592 + protein_coding processed_transcript MGP_BALBcJ_T0014538.1 MGP_BALBcJ_G0012635.1 mouse_genomes_project 4 51050408 51050615 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014561.1 MGP_BALBcJ_G0012658.1 mouse_genomes_project 4 61818495 61819709 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014576.1 MGP_BALBcJ_G0012673.1 mouse_genomes_project 4 69471679 69472012 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068515.1 MGP_BALBcJ_G0028914.1 mouse_genomes_project 4 131788973 131803280 - MGP_BALBcJ_P0068515 Sepn1 protein_coding protein_coding MGP_BALBcJ_T0068516.1 MGP_BALBcJ_G0028914.1 mouse_genomes_project 4 131790660 131792112 - Sepn1 protein_coding processed_transcript MGP_BALBcJ_T0004428.1 MGP_BALBcJ_G0003858.1 mouse_genomes_project 4 40365508 40375611 - Gm12473 antisense antisense MGP_BALBcJ_T0066204.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83603209 83632131 - Plin2 protein_coding processed_transcript MGP_BALBcJ_T0066205.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83630012 83644203 - MGP_BALBcJ_P0066205 Plin2 protein_coding protein_coding MGP_BALBcJ_T0066206.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83630354 83632092 - Plin2 protein_coding processed_transcript MGP_BALBcJ_T0066207.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83630603 83632596 - Plin2 protein_coding processed_transcript MGP_BALBcJ_T0066208.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83633568 83639506 - MGP_BALBcJ_P0066208 Plin2 protein_coding protein_coding MGP_BALBcJ_T0066209.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83635373 83643703 - MGP_BALBcJ_P0066209 Plin2 protein_coding protein_coding MGP_BALBcJ_T0066210.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83635373 83643911 - MGP_BALBcJ_P0066210 Plin2 protein_coding protein_coding MGP_BALBcJ_T0066211.1 MGP_BALBcJ_G0028394.1 mouse_genomes_project 4 83641807 83644129 - Plin2 protein_coding processed_transcript MGP_BALBcJ_T0066024.1 MGP_BALBcJ_G0028362.1 mouse_genomes_project 4 67180293 67365046 - MGP_BALBcJ_P0066024 Cdk5rap2 protein_coding protein_coding MGP_BALBcJ_T0066025.1 MGP_BALBcJ_G0028362.1 mouse_genomes_project 4 67186461 67365021 - MGP_BALBcJ_P0066025 Cdk5rap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066026.1 MGP_BALBcJ_G0028362.1 mouse_genomes_project 4 67201781 67228052 - MGP_BALBcJ_P0066026 Cdk5rap2 protein_coding protein_coding MGP_BALBcJ_T0066027.1 MGP_BALBcJ_G0028362.1 mouse_genomes_project 4 67205902 67207284 - Cdk5rap2 protein_coding processed_transcript MGP_BALBcJ_T0066028.1 MGP_BALBcJ_G0028362.1 mouse_genomes_project 4 67353504 67358160 - Cdk5rap2 protein_coding processed_transcript MGP_BALBcJ_T0011549.1 MGP_BALBcJ_G0009674.1 mouse_genomes_project 4 67367220 67367526 - Gm26320 misc_RNA misc_RNA MGP_BALBcJ_T0068136.1 MGP_BALBcJ_G0028834.1 mouse_genomes_project 4 127710733 127754186 + MGP_BALBcJ_P0068136 Nkain1 protein_coding protein_coding MGP_BALBcJ_T0068137.1 MGP_BALBcJ_G0028834.1 mouse_genomes_project 4 127710940 127754202 + MGP_BALBcJ_P0068137 Nkain1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068138.1 MGP_BALBcJ_G0028834.1 mouse_genomes_project 4 127727170 127746293 + Nkain1 protein_coding processed_transcript MGP_BALBcJ_T0069338.1 MGP_BALBcJ_G0029123.1 mouse_genomes_project 4 147473729 147522741 + MGP_BALBcJ_P0069338 Ctnnbip1 protein_coding protein_coding MGP_BALBcJ_T0069339.1 MGP_BALBcJ_G0029123.1 mouse_genomes_project 4 147500403 147520811 + MGP_BALBcJ_P0069339 Ctnnbip1 protein_coding protein_coding MGP_BALBcJ_T0010561.1 MGP_BALBcJ_G0008686.1 mouse_genomes_project 4 19272606 19272709 + Gm24078 miRNA miRNA MGP_BALBcJ_T0014641.1 MGP_BALBcJ_G0012738.1 mouse_genomes_project 4 92008176 92008640 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065220.1 MGP_BALBcJ_G0028172.1 mouse_genomes_project 4 39707343 39730358 - MGP_BALBcJ_P0065220 Vcp protein_coding unknown_likely_coding MGP_BALBcJ_T0065221.1 MGP_BALBcJ_G0028172.1 mouse_genomes_project 4 39707348 39730687 - MGP_BALBcJ_P0065221 Vcp protein_coding protein_coding MGP_BALBcJ_T0065222.1 MGP_BALBcJ_G0028172.1 mouse_genomes_project 4 39714331 39715787 - Vcp protein_coding processed_transcript MGP_BALBcJ_T0065223.1 MGP_BALBcJ_G0028172.1 mouse_genomes_project 4 39716208 39719298 - Vcp protein_coding processed_transcript MGP_BALBcJ_T0065224.1 MGP_BALBcJ_G0028172.1 mouse_genomes_project 4 39722911 39723935 - Vcp protein_coding processed_transcript MGP_BALBcJ_T0065225.1 MGP_BALBcJ_G0028172.1 mouse_genomes_project 4 39723888 39730613 - Vcp protein_coding processed_transcript MGP_BALBcJ_T0018039.1 MGP_BALBcJ_G0015506.1 mouse_genomes_project 4 106664080 106670375 - 9630013D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0018040.1 MGP_BALBcJ_G0015506.1 mouse_genomes_project 4 106665035 106670401 - 9630013D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0018041.1 MGP_BALBcJ_G0015506.1 mouse_genomes_project 4 106665162 106666679 - 9630013D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0018042.1 MGP_BALBcJ_G0015506.1 mouse_genomes_project 4 106665500 106670156 - 9630013D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0069042.1 MGP_BALBcJ_G0029040.1 mouse_genomes_project 4 139223727 139236914 + MGP_BALBcJ_P0069042 Agmat protein_coding protein_coding MGP_BALBcJ_T0014558.1 MGP_BALBcJ_G0012655.1 mouse_genomes_project 4 59864446 59865110 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065839.1 MGP_BALBcJ_G0028306.1 mouse_genomes_project 4 55607440 55608382 - MGP_BALBcJ_P0065839 Olfr267 protein_coding protein_coding MGP_BALBcJ_T0098764.1 MGP_BALBcJ_G0036818.1 mouse_genomes_project 4 130024679 130024844 - Gm22767 scaRNA scaRNA MGP_BALBcJ_T0069481.1 MGP_BALBcJ_G0029150.1 mouse_genomes_project 4 150048788 150058625 - MGP_BALBcJ_P0069481 Tas1r1 protein_coding unknown_likely_coding MGP_BALBcJ_T0069482.1 MGP_BALBcJ_G0029150.1 mouse_genomes_project 4 150048797 150059779 - MGP_BALBcJ_P0069482 Tas1r1 protein_coding protein_coding MGP_BALBcJ_T0101176.1 MGP_BALBcJ_G0039212.1 mouse_genomes_project 4 129476516 129476590 + Snord99 snoRNA snoRNA MGP_BALBcJ_T0014516.1 MGP_BALBcJ_G0012613.1 mouse_genomes_project 4 43948355 43948490 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001401.1 MGP_BALBcJ_G0001323.1 mouse_genomes_project 4 2864153 2864428 + TEC TEC MGP_BALBcJ_T0066661.1 MGP_BALBcJ_G0028511.1 mouse_genomes_project 4 104054592 104065466 - MGP_BALBcJ_P0066661 Mrpl37 protein_coding protein_coding MGP_BALBcJ_T0066662.1 MGP_BALBcJ_G0028511.1 mouse_genomes_project 4 104054603 104058669 - Mrpl37 protein_coding retained_intron MGP_BALBcJ_T0066663.1 MGP_BALBcJ_G0028511.1 mouse_genomes_project 4 104054686 104063368 - Mrpl37 protein_coding processed_transcript MGP_BALBcJ_T0066664.1 MGP_BALBcJ_G0028511.1 mouse_genomes_project 4 104054693 104065418 - Mrpl37 protein_coding processed_transcript MGP_BALBcJ_T0066665.1 MGP_BALBcJ_G0028511.1 mouse_genomes_project 4 104062993 104063955 - Mrpl37 protein_coding retained_intron MGP_BALBcJ_T0069400.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148264201 148610289 + MGP_BALBcJ_P0069400 Rere protein_coding protein_coding MGP_BALBcJ_T0069401.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148264367 148265022 + Rere protein_coding processed_transcript MGP_BALBcJ_T0069402.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148383864 148610990 + MGP_BALBcJ_P0069402 Rere protein_coding unknown_likely_coding MGP_BALBcJ_T0069403.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148392536 148457649 + MGP_BALBcJ_P0069403 Rere protein_coding protein_coding MGP_BALBcJ_T0069404.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148475792 148610285 + MGP_BALBcJ_P0069404 Rere protein_coding protein_coding MGP_BALBcJ_T0069405.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148556598 148557506 + Rere protein_coding processed_transcript MGP_BALBcJ_T0069406.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148556667 148600558 + Rere protein_coding processed_transcript MGP_BALBcJ_T0069407.1 MGP_BALBcJ_G0029135.1 mouse_genomes_project 4 148605745 148608308 + MGP_BALBcJ_P0069407 Rere protein_coding protein_coding MGP_BALBcJ_T0098602.1 MGP_BALBcJ_G0036656.1 mouse_genomes_project 4 92031930 92032044 + n-R5s189 rRNA rRNA MGP_BALBcJ_T0007969.1 MGP_BALBcJ_G0006501.1 mouse_genomes_project 4 132900180 132903724 + 1700029M20Rik lincRNA lincRNA MGP_BALBcJ_T0007970.1 MGP_BALBcJ_G0006501.1 mouse_genomes_project 4 132900299 132902011 + 1700029M20Rik lincRNA lincRNA MGP_BALBcJ_T0007971.1 MGP_BALBcJ_G0006501.1 mouse_genomes_project 4 132900343 132902011 + 1700029M20Rik lincRNA lincRNA MGP_BALBcJ_T0007972.1 MGP_BALBcJ_G0006501.1 mouse_genomes_project 4 132900778 132901511 + 1700029M20Rik lincRNA lincRNA MGP_BALBcJ_T0069854.1 MGP_BALBcJ_G0029216.1 mouse_genomes_project 4 153956749 153961468 - MGP_BALBcJ_P0069854 Cptp protein_coding protein_coding MGP_BALBcJ_T0069855.1 MGP_BALBcJ_G0029216.1 mouse_genomes_project 4 153957324 153961390 - Cptp protein_coding processed_transcript MGP_BALBcJ_T0069856.1 MGP_BALBcJ_G0029216.1 mouse_genomes_project 4 153958391 153960846 - MGP_BALBcJ_P0069856 Cptp protein_coding protein_coding MGP_BALBcJ_T0069838.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153932038 153934486 + MGP_BALBcJ_P0069838 Mxra8 protein_coding protein_coding MGP_BALBcJ_T0069839.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153932084 153936356 + MGP_BALBcJ_P0069839 Mxra8 protein_coding protein_coding MGP_BALBcJ_T0069840.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153932188 153933637 + Mxra8 protein_coding retained_intron MGP_BALBcJ_T0069841.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153934620 153935224 + Mxra8 protein_coding retained_intron MGP_BALBcJ_T0069842.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153934700 153935724 + Mxra8 protein_coding retained_intron MGP_BALBcJ_T0069843.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153934721 153935841 + Mxra8 protein_coding retained_intron MGP_BALBcJ_T0069844.1 MGP_BALBcJ_G0029213.1 mouse_genomes_project 4 153935172 153936033 + Mxra8 protein_coding processed_transcript MGP_BALBcJ_T0018036.1 MGP_BALBcJ_G0015503.1 mouse_genomes_project 4 103231545 103279370 + Gm12724 processed_transcript processed_transcript MGP_BALBcJ_T0014407.1 MGP_BALBcJ_G0012504.1 mouse_genomes_project 4 12319334 12323147 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066445.1 MGP_BALBcJ_G0028461.1 mouse_genomes_project 4 96321010 96322435 + MGP_BALBcJ_P0066445 Gm12689 protein_coding protein_coding MGP_BALBcJ_T0007876.1 MGP_BALBcJ_G0006438.1 mouse_genomes_project 4 96671496 96672873 - Gm12688 lincRNA lincRNA MGP_BALBcJ_T0065167.1 MGP_BALBcJ_G0028152.1 mouse_genomes_project 4 38575651 38576685 - MGP_BALBcJ_P0065167 protein_coding protein_coding MGP_BALBcJ_T0014817.1 MGP_BALBcJ_G0012914.1 mouse_genomes_project 4 152295406 152295878 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068220.1 MGP_BALBcJ_G0028849.1 mouse_genomes_project 4 129468084 129469273 - MGP_BALBcJ_P0068220 Rab42 protein_coding protein_coding MGP_BALBcJ_T0014731.1 MGP_BALBcJ_G0012828.1 mouse_genomes_project 4 119700869 119701848 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014798.1 MGP_BALBcJ_G0012895.1 mouse_genomes_project 4 143190744 143190882 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099813.1 MGP_BALBcJ_G0037849.1 mouse_genomes_project 4 13336268 13336374 - Gm23975 snRNA snRNA MGP_BALBcJ_T0066983.1 MGP_BALBcJ_G0028565.1 mouse_genomes_project 4 108994951 109014055 + MGP_BALBcJ_P0066983 Skint1 protein_coding protein_coding MGP_BALBcJ_T0066984.1 MGP_BALBcJ_G0028565.1 mouse_genomes_project 4 108994951 109017923 + MGP_BALBcJ_P0066984 Skint1 protein_coding protein_coding MGP_BALBcJ_T0066985.1 MGP_BALBcJ_G0028565.1 mouse_genomes_project 4 108994951 109014055 + MGP_BALBcJ_P0066985 Skint1 protein_coding protein_coding MGP_BALBcJ_T0066986.1 MGP_BALBcJ_G0028565.1 mouse_genomes_project 4 108994951 109008404 + MGP_BALBcJ_P0066986 Skint1 protein_coding protein_coding MGP_BALBcJ_T0066987.1 MGP_BALBcJ_G0028565.1 mouse_genomes_project 4 108994964 109001249 + Skint1 protein_coding retained_intron MGP_BALBcJ_T0007978.1 MGP_BALBcJ_G0006507.1 mouse_genomes_project 4 135584971 135585447 + 2310026L22Rik lincRNA lincRNA MGP_BALBcJ_T0066514.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99056372 99602512 + MGP_BALBcJ_P0066514 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066515.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99056554 99172027 + Pde4b protein_coding retained_intron MGP_BALBcJ_T0066516.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99056570 99554028 + MGP_BALBcJ_P0066516 Pde4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066517.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99234362 99552355 + MGP_BALBcJ_P0066517 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066518.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99234622 99603938 + MGP_BALBcJ_P0066518 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066519.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99234849 99502814 + MGP_BALBcJ_P0066519 Pde4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066520.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99409269 99602215 + MGP_BALBcJ_P0066520 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066521.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99417825 99538914 + MGP_BALBcJ_P0066521 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066522.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99464040 99483848 + Pde4b protein_coding retained_intron MGP_BALBcJ_T0066523.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99566523 99602526 + MGP_BALBcJ_P0066523 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066524.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99584240 99602382 + MGP_BALBcJ_P0066524 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066525.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99586409 99602540 + MGP_BALBcJ_P0066525 Pde4b protein_coding protein_coding MGP_BALBcJ_T0066526.1 MGP_BALBcJ_G0028482.1 mouse_genomes_project 4 99586529 99600128 + MGP_BALBcJ_P0066526 Pde4b protein_coding protein_coding MGP_BALBcJ_T0014586.1 MGP_BALBcJ_G0012683.1 mouse_genomes_project 4 72039696 72040011 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007889.1 MGP_BALBcJ_G0006448.1 mouse_genomes_project 4 103077086 103093850 - Gm12729 lincRNA lincRNA MGP_BALBcJ_T0014370.1 MGP_BALBcJ_G0012467.1 mouse_genomes_project 4 1029879 1030395 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099838.1 MGP_BALBcJ_G0037874.1 mouse_genomes_project 4 60522464 60522571 - Gm24448 snRNA snRNA MGP_BALBcJ_T0064734.1 MGP_BALBcJ_G0028043.1 mouse_genomes_project 4 12448185 12483301 + MGP_BALBcJ_P0064734 Nbn protein_coding protein_coding MGP_BALBcJ_T0064735.1 MGP_BALBcJ_G0028043.1 mouse_genomes_project 4 12448227 12472265 + MGP_BALBcJ_P0064735 Nbn protein_coding protein_coding MGP_BALBcJ_T0102553.1 MGP_BALBcJ_G0040369.1 mouse_genomes_project 4 141598161 141600036 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010577.1 MGP_BALBcJ_G0008702.1 mouse_genomes_project 4 45004600 45004697 - Mir1958 miRNA miRNA MGP_BALBcJ_T0101109.1 MGP_BALBcJ_G0039145.1 mouse_genomes_project 4 30701222 30701309 + Gm22010 snoRNA snoRNA MGP_BALBcJ_T0068077.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127282065 127321132 + MGP_BALBcJ_P0068077 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068078.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127282383 127321132 + MGP_BALBcJ_P0068078 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068079.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127282487 127321132 + MGP_BALBcJ_P0068079 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068080.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127290193 127321132 + MGP_BALBcJ_P0068080 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068081.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127290194 127320838 + MGP_BALBcJ_P0068081 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068082.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127290194 127320838 + MGP_BALBcJ_P0068082 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068083.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127290194 127320838 + MGP_BALBcJ_P0068083 Adgrb2 protein_coding protein_coding MGP_BALBcJ_T0068084.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127308363 127310355 + Adgrb2 protein_coding retained_intron MGP_BALBcJ_T0068085.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127308556 127311035 + Adgrb2 protein_coding retained_intron MGP_BALBcJ_T0068086.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127310689 127311066 + Adgrb2 protein_coding retained_intron MGP_BALBcJ_T0068087.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127312128 127313074 + Adgrb2 protein_coding retained_intron MGP_BALBcJ_T0068088.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127317276 127320063 + Adgrb2 protein_coding retained_intron MGP_BALBcJ_T0068089.1 MGP_BALBcJ_G0028823.1 mouse_genomes_project 4 127319614 127320930 + Adgrb2 protein_coding retained_intron MGP_BALBcJ_T0099845.1 MGP_BALBcJ_G0037881.1 mouse_genomes_project 4 83451475 83451549 + Gm26017 snRNA snRNA MGP_BALBcJ_T0065716.1 MGP_BALBcJ_G0028274.1 mouse_genomes_project 4 49724787 49725749 - MGP_BALBcJ_P0065716 Olfr272 protein_coding protein_coding MGP_BALBcJ_T0065717.1 MGP_BALBcJ_G0028274.1 mouse_genomes_project 4 49724787 49733562 - MGP_BALBcJ_P0065717 Olfr272 protein_coding protein_coding MGP_BALBcJ_T0065519.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42047281 42065025 + MGP_BALBcJ_P0065519 Trmt10b protein_coding protein_coding MGP_BALBcJ_T0065520.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42047309 42054546 + MGP_BALBcJ_P0065520 Trmt10b protein_coding protein_coding MGP_BALBcJ_T0065521.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42050571 42058730 + Trmt10b protein_coding processed_transcript MGP_BALBcJ_T0065522.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42050591 42064036 + Trmt10b protein_coding processed_transcript MGP_BALBcJ_T0065523.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42050591 42054543 + Trmt10b protein_coding processed_transcript MGP_BALBcJ_T0065524.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42050591 42064036 + MGP_BALBcJ_P0065524 Trmt10b protein_coding protein_coding MGP_BALBcJ_T0065525.1 MGP_BALBcJ_G0028220.1 mouse_genomes_project 4 42062991 42063942 + Trmt10b protein_coding processed_transcript MGP_BALBcJ_T0014621.1 MGP_BALBcJ_G0012718.1 mouse_genomes_project 4 86207006 86207499 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068704.1 MGP_BALBcJ_G0028961.1 mouse_genomes_project 4 134605385 134628637 + MGP_BALBcJ_P0068704 Wnt4 protein_coding protein_coding MGP_BALBcJ_T0101152.1 MGP_BALBcJ_G0039188.1 mouse_genomes_project 4 103112409 103112522 - Gm26047 snoRNA snoRNA MGP_BALBcJ_T0014376.1 MGP_BALBcJ_G0012473.1 mouse_genomes_project 4 2992805 2993249 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065068.1 MGP_BALBcJ_G0028128.1 mouse_genomes_project 4 38070813 38094380 - MGP_BALBcJ_P0065068 Dcaf12 protein_coding protein_coding MGP_BALBcJ_T0007812.1 MGP_BALBcJ_G0006385.1 mouse_genomes_project 4 42476482 42477736 + Gm12410 lincRNA lincRNA MGP_BALBcJ_T0067190.1 MGP_BALBcJ_G0028616.1 mouse_genomes_project 4 113752443 113838315 + MGP_BALBcJ_P0067190 Tesk2 protein_coding protein_coding MGP_BALBcJ_T0067191.1 MGP_BALBcJ_G0028616.1 mouse_genomes_project 4 113752464 113840029 + MGP_BALBcJ_P0067191 Tesk2 protein_coding protein_coding MGP_BALBcJ_T0067192.1 MGP_BALBcJ_G0028616.1 mouse_genomes_project 4 113773866 113838175 + MGP_BALBcJ_P0067192 Tesk2 protein_coding protein_coding MGP_BALBcJ_T0067193.1 MGP_BALBcJ_G0028616.1 mouse_genomes_project 4 113804621 113836335 + Tesk2 protein_coding processed_transcript MGP_BALBcJ_T0098598.1 MGP_BALBcJ_G0036652.1 mouse_genomes_project 4 50681292 50681411 + n-R5s185 rRNA rRNA MGP_BALBcJ_T0066774.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105025507 105042883 - MGP_BALBcJ_P0066774 Podn protein_coding protein_coding MGP_BALBcJ_T0066775.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105025509 105035105 - MGP_BALBcJ_P0066775 Podn protein_coding protein_coding MGP_BALBcJ_T0066776.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105025513 105039488 - MGP_BALBcJ_P0066776 Podn protein_coding protein_coding MGP_BALBcJ_T0066777.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105025567 105042746 - MGP_BALBcJ_P0066777 Podn protein_coding protein_coding MGP_BALBcJ_T0066778.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105025570 105042747 - Podn protein_coding processed_transcript MGP_BALBcJ_T0066779.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105028509 105032316 - MGP_BALBcJ_P0066779 Podn protein_coding protein_coding MGP_BALBcJ_T0066780.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105037809 105041779 - Podn protein_coding processed_transcript MGP_BALBcJ_T0066781.1 MGP_BALBcJ_G0028529.1 mouse_genomes_project 4 105037981 105043130 - Podn protein_coding processed_transcript MGP_BALBcJ_T0068927.1 MGP_BALBcJ_G0029014.1 mouse_genomes_project 4 138264836 138298403 - MGP_BALBcJ_P0068927 Padi1 protein_coding protein_coding MGP_BALBcJ_T0067039.1 MGP_BALBcJ_G0028587.1 mouse_genomes_project 4 112639982 112663549 - MGP_BALBcJ_P0067039 Cyp4b1 protein_coding protein_coding MGP_BALBcJ_T0067040.1 MGP_BALBcJ_G0028587.1 mouse_genomes_project 4 112639982 112655901 - MGP_BALBcJ_P0067040 Cyp4b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067041.1 MGP_BALBcJ_G0028587.1 mouse_genomes_project 4 112640933 112657868 - MGP_BALBcJ_P0067041 Cyp4b1 protein_coding protein_coding MGP_BALBcJ_T0067042.1 MGP_BALBcJ_G0028587.1 mouse_genomes_project 4 112643750 112651406 - Cyp4b1 protein_coding retained_intron MGP_BALBcJ_T0014596.1 MGP_BALBcJ_G0012693.1 mouse_genomes_project 4 73755103 73756140 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069161.1 MGP_BALBcJ_G0029089.1 mouse_genomes_project 4 145798458 145799768 + MGP_BALBcJ_P0069161 Fv1 protein_coding protein_coding MGP_BALBcJ_T0069804.1 MGP_BALBcJ_G0029205.1 mouse_genomes_project 4 153824825 153830487 + MGP_BALBcJ_P0069804 Tmem240 protein_coding protein_coding MGP_BALBcJ_T0069805.1 MGP_BALBcJ_G0029205.1 mouse_genomes_project 4 153824829 153830909 + Tmem240 protein_coding retained_intron MGP_BALBcJ_T0069806.1 MGP_BALBcJ_G0029205.1 mouse_genomes_project 4 153824899 153830909 + MGP_BALBcJ_P0069806 Tmem240 protein_coding protein_coding MGP_BALBcJ_T0068573.1 MGP_BALBcJ_G0028926.1 mouse_genomes_project 4 132683724 132705269 - MGP_BALBcJ_P0068573 Rcan3 protein_coding protein_coding MGP_BALBcJ_T0068574.1 MGP_BALBcJ_G0028926.1 mouse_genomes_project 4 132683724 132696684 - MGP_BALBcJ_P0068574 Rcan3 protein_coding protein_coding MGP_BALBcJ_T0068575.1 MGP_BALBcJ_G0028926.1 mouse_genomes_project 4 132689859 132705239 - MGP_BALBcJ_P0068575 Rcan3 protein_coding protein_coding MGP_BALBcJ_T0069616.1 MGP_BALBcJ_G0029172.1 mouse_genomes_project 4 152126402 152168117 - MGP_BALBcJ_P0069616 Trp73 protein_coding protein_coding MGP_BALBcJ_T0069617.1 MGP_BALBcJ_G0029172.1 mouse_genomes_project 4 152128661 152168117 - MGP_BALBcJ_P0069617 Trp73 protein_coding protein_coding MGP_BALBcJ_T0069618.1 MGP_BALBcJ_G0029172.1 mouse_genomes_project 4 152129138 152168111 - MGP_BALBcJ_P0069618 Trp73 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069619.1 MGP_BALBcJ_G0029172.1 mouse_genomes_project 4 152129140 152176641 - MGP_BALBcJ_P0069619 Trp73 protein_coding protein_coding MGP_BALBcJ_T0069620.1 MGP_BALBcJ_G0029172.1 mouse_genomes_project 4 152134594 152156274 - MGP_BALBcJ_P0069620 Trp73 protein_coding protein_coding MGP_BALBcJ_T0069621.1 MGP_BALBcJ_G0029172.1 mouse_genomes_project 4 152137847 152187077 - MGP_BALBcJ_P0069621 Trp73 protein_coding protein_coding MGP_BALBcJ_T0065714.1 MGP_BALBcJ_G0028273.1 mouse_genomes_project 4 49667991 49669051 - MGP_BALBcJ_P0065714 Olfr273 protein_coding protein_coding MGP_BALBcJ_T0065715.1 MGP_BALBcJ_G0028273.1 mouse_genomes_project 4 49668036 49670944 - MGP_BALBcJ_P0065715 Olfr273 protein_coding protein_coding MGP_BALBcJ_T0065092.1 MGP_BALBcJ_G0028134.1 mouse_genomes_project 4 38298580 38350543 - MGP_BALBcJ_P0065092 Fam219a protein_coding protein_coding MGP_BALBcJ_T0065093.1 MGP_BALBcJ_G0028134.1 mouse_genomes_project 4 38298580 38350515 - MGP_BALBcJ_P0065093 Fam219a protein_coding protein_coding MGP_BALBcJ_T0065094.1 MGP_BALBcJ_G0028134.1 mouse_genomes_project 4 38298580 38350543 - MGP_BALBcJ_P0065094 Fam219a protein_coding protein_coding MGP_BALBcJ_T0065095.1 MGP_BALBcJ_G0028134.1 mouse_genomes_project 4 38301188 38350538 - MGP_BALBcJ_P0065095 Fam219a protein_coding unknown_likely_coding MGP_BALBcJ_T0065096.1 MGP_BALBcJ_G0028134.1 mouse_genomes_project 4 38301268 38305716 - Fam219a protein_coding processed_transcript MGP_BALBcJ_T0065097.1 MGP_BALBcJ_G0028134.1 mouse_genomes_project 4 38305061 38350544 - Fam219a protein_coding processed_transcript MGP_BALBcJ_T0065447.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40871236 40910765 - MGP_BALBcJ_P0065447 Rnf38 protein_coding protein_coding MGP_BALBcJ_T0065448.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40871239 40910483 - MGP_BALBcJ_P0065448 Rnf38 protein_coding protein_coding MGP_BALBcJ_T0065449.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40874446 40902110 - MGP_BALBcJ_P0065449 Rnf38 protein_coding protein_coding MGP_BALBcJ_T0065450.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40874450 40910805 - MGP_BALBcJ_P0065450 Rnf38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065451.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40874532 40883937 - Rnf38 protein_coding processed_transcript MGP_BALBcJ_T0065452.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40874534 40883816 - Rnf38 protein_coding processed_transcript MGP_BALBcJ_T0065453.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40885636 40911776 - MGP_BALBcJ_P0065453 Rnf38 protein_coding protein_coding MGP_BALBcJ_T0065454.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40885690 40902221 - MGP_BALBcJ_P0065454 Rnf38 protein_coding protein_coding MGP_BALBcJ_T0065455.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40885734 40911162 - MGP_BALBcJ_P0065455 Rnf38 protein_coding protein_coding MGP_BALBcJ_T0065456.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40892452 40910692 - Rnf38 protein_coding processed_transcript MGP_BALBcJ_T0065457.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40892459 40971726 - Rnf38 protein_coding processed_transcript MGP_BALBcJ_T0065458.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40892488 40911079 - Rnf38 protein_coding processed_transcript MGP_BALBcJ_T0065459.1 MGP_BALBcJ_G0028210.1 mouse_genomes_project 4 40902139 40910649 - Rnf38 protein_coding processed_transcript MGP_BALBcJ_T0014444.1 MGP_BALBcJ_G0012541.1 mouse_genomes_project 4 22049679 22050499 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065183.1 MGP_BALBcJ_G0028157.1 mouse_genomes_project 4 38873624 38874290 + MGP_BALBcJ_P0065183 protein_coding protein_coding MGP_BALBcJ_T0069897.1 MGP_BALBcJ_G0029223.1 mouse_genomes_project 4 154078859 154095913 + MGP_BALBcJ_P0069897 Sdf4 protein_coding protein_coding MGP_BALBcJ_T0069898.1 MGP_BALBcJ_G0029223.1 mouse_genomes_project 4 154078898 154099274 + MGP_BALBcJ_P0069898 Sdf4 protein_coding protein_coding MGP_BALBcJ_T0069899.1 MGP_BALBcJ_G0029223.1 mouse_genomes_project 4 154079157 154088468 + MGP_BALBcJ_P0069899 Sdf4 protein_coding protein_coding MGP_BALBcJ_T0069900.1 MGP_BALBcJ_G0029223.1 mouse_genomes_project 4 154079364 154096021 + MGP_BALBcJ_P0069900 Sdf4 protein_coding protein_coding MGP_BALBcJ_T0069901.1 MGP_BALBcJ_G0029223.1 mouse_genomes_project 4 154085678 154087216 + Sdf4 protein_coding retained_intron MGP_BALBcJ_T0069902.1 MGP_BALBcJ_G0029223.1 mouse_genomes_project 4 154094212 154095560 + Sdf4 protein_coding retained_intron MGP_BALBcJ_T0101139.1 MGP_BALBcJ_G0039175.1 mouse_genomes_project 4 71568437 71568575 + Gm26379 snoRNA snoRNA MGP_BALBcJ_T0069425.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148917730 148937595 + MGP_BALBcJ_P0069425 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069427.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148923332 148951622 + MGP_BALBcJ_P0069427 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069428.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148923367 148951622 + MGP_BALBcJ_P0069428 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069429.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148928475 148950752 + MGP_BALBcJ_P0069429 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069430.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148931101 148937586 + MGP_BALBcJ_P0069430 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069431.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148931182 148933132 + Tnfrsf9 protein_coding processed_transcript MGP_BALBcJ_T0069432.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148931182 148951622 + MGP_BALBcJ_P0069432 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069433.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148932859 148950587 + MGP_BALBcJ_P0069433 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0069434.1 MGP_BALBcJ_G0029139.1 mouse_genomes_project 4 148932980 148938740 + MGP_BALBcJ_P0069434 Tnfrsf9 protein_coding protein_coding MGP_BALBcJ_T0067662.1 MGP_BALBcJ_G0028733.1 mouse_genomes_project 4 121872582 121879700 + MGP_BALBcJ_P0067662 Fhl3 protein_coding protein_coding MGP_BALBcJ_T0067663.1 MGP_BALBcJ_G0028733.1 mouse_genomes_project 4 121872600 121879587 + MGP_BALBcJ_P0067663 Fhl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067664.1 MGP_BALBcJ_G0028733.1 mouse_genomes_project 4 121877328 121879664 + MGP_BALBcJ_P0067664 Fhl3 protein_coding unknown_likely_coding MGP_BALBcJ_T0018048.1 MGP_BALBcJ_G0015511.1 mouse_genomes_project 4 116293959 116295598 + Gm12898 processed_transcript processed_transcript MGP_BALBcJ_T0014673.1 MGP_BALBcJ_G0012770.1 mouse_genomes_project 4 103087701 103088060 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069943.1 MGP_BALBcJ_G0029235.1 mouse_genomes_project 4 154329845 154338966 - MGP_BALBcJ_P0069943 Samd11 protein_coding protein_coding MGP_BALBcJ_T0069944.1 MGP_BALBcJ_G0029235.1 mouse_genomes_project 4 154330609 154338165 - MGP_BALBcJ_P0069944 Samd11 protein_coding unknown_likely_coding MGP_BALBcJ_T0068656.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133602766 133633268 + MGP_BALBcJ_P0068656 protein_coding protein_coding MGP_BALBcJ_T0068657.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133602792 133652064 + MGP_BALBcJ_P0068657 protein_coding protein_coding MGP_BALBcJ_T0068658.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133602792 133633268 + MGP_BALBcJ_P0068658 protein_coding protein_coding MGP_BALBcJ_T0068659.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133602849 133633450 + MGP_BALBcJ_P0068659 protein_coding protein_coding MGP_BALBcJ_T0068660.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133602852 133621876 + MGP_BALBcJ_P0068660 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068661.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133603359 133619670 + MGP_BALBcJ_P0068661 protein_coding protein_coding MGP_BALBcJ_T0068662.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133603415 133621904 + MGP_BALBcJ_P0068662 protein_coding protein_coding MGP_BALBcJ_T0068663.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133603509 133608249 + MGP_BALBcJ_P0068663 protein_coding protein_coding MGP_BALBcJ_T0068664.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133628658 133631860 + protein_coding retained_intron MGP_BALBcJ_T0068665.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133631605 133635554 + protein_coding retained_intron MGP_BALBcJ_T0068666.1 MGP_BALBcJ_G0028948.1 mouse_genomes_project 4 133648404 133650666 + protein_coding processed_transcript MGP_BALBcJ_T0065610.1 MGP_BALBcJ_G0028242.1 mouse_genomes_project 4 43431664 43771022 - MGP_BALBcJ_P0065610 Gabbr2 protein_coding protein_coding MGP_BALBcJ_T0065611.1 MGP_BALBcJ_G0028242.1 mouse_genomes_project 4 43433867 43458993 - Gabbr2 protein_coding processed_transcript MGP_BALBcJ_T0065612.1 MGP_BALBcJ_G0028242.1 mouse_genomes_project 4 43448165 43495682 - MGP_BALBcJ_P0065612 Gabbr2 protein_coding protein_coding MGP_BALBcJ_T0065613.1 MGP_BALBcJ_G0028242.1 mouse_genomes_project 4 43573439 43634666 - Gabbr2 protein_coding processed_transcript MGP_BALBcJ_T0007782.1 MGP_BALBcJ_G0006357.1 mouse_genomes_project 4 10690634 10708389 - 1700120G11Rik lincRNA lincRNA MGP_BALBcJ_T0069626.1 MGP_BALBcJ_G0029174.1 mouse_genomes_project 4 152230108 152233290 - MGP_BALBcJ_P0069626 Tprgl protein_coding protein_coding MGP_BALBcJ_T0069627.1 MGP_BALBcJ_G0029174.1 mouse_genomes_project 4 152230763 152233290 - Tprgl protein_coding processed_transcript MGP_BALBcJ_T0069628.1 MGP_BALBcJ_G0029174.1 mouse_genomes_project 4 152230979 152233256 - MGP_BALBcJ_P0069628 Tprgl protein_coding protein_coding MGP_BALBcJ_T0069629.1 MGP_BALBcJ_G0029174.1 mouse_genomes_project 4 152231096 152232790 - Tprgl protein_coding processed_transcript MGP_BALBcJ_T0069630.1 MGP_BALBcJ_G0029174.1 mouse_genomes_project 4 152232190 152233230 - Tprgl protein_coding processed_transcript MGP_BALBcJ_T0007846.1 MGP_BALBcJ_G0006413.1 mouse_genomes_project 4 68038308 68093933 - Gm11228 lincRNA lincRNA MGP_BALBcJ_T0014764.1 MGP_BALBcJ_G0012861.1 mouse_genomes_project 4 131732942 131733695 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069123.1 MGP_BALBcJ_G0029074.1 mouse_genomes_project 4 142193557 142193866 - MGP_BALBcJ_P0069123 Gm9944 protein_coding protein_coding MGP_BALBcJ_T0007795.1 MGP_BALBcJ_G0006369.1 mouse_genomes_project 4 27062406 27163008 + Gm11924 lincRNA lincRNA MGP_BALBcJ_T0102549.1 MGP_BALBcJ_G0040365.1 mouse_genomes_project 4 140972693 140973194 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0067659.1 MGP_BALBcJ_G0028731.1 mouse_genomes_project 4 121826294 121830143 + MGP_BALBcJ_P0067659 Pou3f1 protein_coding protein_coding MGP_BALBcJ_T0099809.1 MGP_BALBcJ_G0037845.1 mouse_genomes_project 4 5673358 5673464 + Gm23423 snRNA snRNA MGP_BALBcJ_T0014537.1 MGP_BALBcJ_G0012634.1 mouse_genomes_project 4 50699039 50699443 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064761.1 MGP_BALBcJ_G0028055.1 mouse_genomes_project 4 16539934 16553456 + MGP_BALBcJ_P0064761 Ttpa protein_coding protein_coding MGP_BALBcJ_T0064762.1 MGP_BALBcJ_G0028055.1 mouse_genomes_project 4 16540006 16562555 + MGP_BALBcJ_P0064762 Ttpa protein_coding protein_coding MGP_BALBcJ_T0064763.1 MGP_BALBcJ_G0028055.1 mouse_genomes_project 4 16540356 16562870 + MGP_BALBcJ_P0064763 Ttpa protein_coding protein_coding MGP_BALBcJ_T0064764.1 MGP_BALBcJ_G0028055.1 mouse_genomes_project 4 16540427 16562870 + MGP_BALBcJ_P0064764 Ttpa protein_coding protein_coding MGP_BALBcJ_T0101132.1 MGP_BALBcJ_G0039168.1 mouse_genomes_project 4 59742630 59742763 + Gm24117 snoRNA snoRNA MGP_BALBcJ_T0064837.1 MGP_BALBcJ_G0028070.1 mouse_genomes_project 4 21503696 21544951 + Gpr63 protein_coding processed_transcript MGP_BALBcJ_T0064838.1 MGP_BALBcJ_G0028070.1 mouse_genomes_project 4 21510708 21546884 + MGP_BALBcJ_P0064838 Gpr63 protein_coding protein_coding MGP_BALBcJ_T0067378.1 MGP_BALBcJ_G0028650.1 mouse_genomes_project 4 115495756 115500222 - MGP_BALBcJ_P0067378 Cdc20 protein_coding protein_coding MGP_BALBcJ_T0067379.1 MGP_BALBcJ_G0028650.1 mouse_genomes_project 4 115495960 115499448 - MGP_BALBcJ_P0067379 Cdc20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067380.1 MGP_BALBcJ_G0028650.1 mouse_genomes_project 4 115496403 115498691 - Cdc20 protein_coding retained_intron MGP_BALBcJ_T0011556.1 MGP_BALBcJ_G0009681.1 mouse_genomes_project 4 102960507 102960818 - Gm24363 misc_RNA misc_RNA MGP_BALBcJ_T0064859.1 MGP_BALBcJ_G0028076.1 mouse_genomes_project 4 26662170 26671527 + MGP_BALBcJ_P0064859 Gm4951 protein_coding protein_coding MGP_BALBcJ_T0007928.1 MGP_BALBcJ_G0006474.1 mouse_genomes_project 4 124705670 124707687 + 4930471C06Rik lincRNA lincRNA MGP_BALBcJ_T0007929.1 MGP_BALBcJ_G0006474.1 mouse_genomes_project 4 124705756 124707687 + 4930471C06Rik lincRNA lincRNA MGP_BALBcJ_T0067970.1 MGP_BALBcJ_G0028803.1 mouse_genomes_project 4 126620084 126645770 - MGP_BALBcJ_P0067970 Zbtb8a protein_coding protein_coding MGP_BALBcJ_T0068528.1 MGP_BALBcJ_G0028918.1 mouse_genomes_project 4 132119725 132157226 + MGP_BALBcJ_P0068528 Rhd protein_coding protein_coding MGP_BALBcJ_T0068529.1 MGP_BALBcJ_G0028918.1 mouse_genomes_project 4 132140998 132151364 + Rhd protein_coding retained_intron MGP_BALBcJ_T0067559.1 MGP_BALBcJ_G0028701.1 mouse_genomes_project 4 118053219 118102172 - MGP_BALBcJ_P0067559 Smap2 protein_coding protein_coding MGP_BALBcJ_T0067560.1 MGP_BALBcJ_G0028701.1 mouse_genomes_project 4 118056779 118060598 - Smap2 protein_coding processed_transcript MGP_BALBcJ_T0067180.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113738788 113740022 + MGP_BALBcJ_P0067180 Ccdc163 protein_coding protein_coding MGP_BALBcJ_T0067181.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113738799 113740499 + MGP_BALBcJ_P0067181 Ccdc163 protein_coding protein_coding MGP_BALBcJ_T0067182.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113738805 113739977 + Ccdc163 protein_coding processed_transcript MGP_BALBcJ_T0067183.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113738814 113740721 + Ccdc163 protein_coding retained_intron MGP_BALBcJ_T0067184.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113738894 113739725 + MGP_BALBcJ_P0067184 Ccdc163 protein_coding protein_coding MGP_BALBcJ_T0067185.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113739119 113746602 + MGP_BALBcJ_P0067185 Ccdc163 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067186.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113739207 113746456 + MGP_BALBcJ_P0067186 Ccdc163 protein_coding protein_coding MGP_BALBcJ_T0067187.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113743511 113774043 + Ccdc163 protein_coding processed_transcript MGP_BALBcJ_T0067188.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113743809 113783563 + Ccdc163 protein_coding processed_transcript MGP_BALBcJ_T0067189.1 MGP_BALBcJ_G0028615.1 mouse_genomes_project 4 113743876 113746597 + MGP_BALBcJ_P0067189 Ccdc163 protein_coding protein_coding MGP_BALBcJ_T0069742.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153496447 153503632 + protein_coding retained_intron MGP_BALBcJ_T0069743.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153496515 153531906 + protein_coding processed_transcript MGP_BALBcJ_T0069744.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153496515 153510203 + MGP_BALBcJ_P0069744 protein_coding protein_coding MGP_BALBcJ_T0069745.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153496515 153555860 + MGP_BALBcJ_P0069745 protein_coding protein_coding MGP_BALBcJ_T0069746.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153510150 153536757 + protein_coding retained_intron MGP_BALBcJ_T0069747.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153510498 153555442 + MGP_BALBcJ_P0069747 protein_coding protein_coding MGP_BALBcJ_T0069748.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153518078 153536590 + protein_coding processed_transcript MGP_BALBcJ_T0069749.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153540317 153555442 + protein_coding retained_intron MGP_BALBcJ_T0069750.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153550926 153555567 + protein_coding retained_intron MGP_BALBcJ_T0069751.1 MGP_BALBcJ_G0029194.1 mouse_genomes_project 4 153550973 153555517 + protein_coding retained_intron MGP_BALBcJ_T0066829.1 MGP_BALBcJ_G0028539.1 mouse_genomes_project 4 105598358 105613710 + Orc1 protein_coding processed_transcript MGP_BALBcJ_T0066830.1 MGP_BALBcJ_G0028539.1 mouse_genomes_project 4 105598369 105613851 + Orc1 protein_coding processed_transcript MGP_BALBcJ_T0066831.1 MGP_BALBcJ_G0028539.1 mouse_genomes_project 4 105598389 105634070 + MGP_BALBcJ_P0066831 Orc1 protein_coding protein_coding MGP_BALBcJ_T0066832.1 MGP_BALBcJ_G0028539.1 mouse_genomes_project 4 105605836 105606627 + Orc1 protein_coding processed_transcript MGP_BALBcJ_T0066833.1 MGP_BALBcJ_G0028539.1 mouse_genomes_project 4 105622401 105624354 + Orc1 protein_coding processed_transcript MGP_BALBcJ_T0102511.1 MGP_BALBcJ_G0040327.1 mouse_genomes_project 4 58939511 58941640 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066806.1 MGP_BALBcJ_G0028533.1 mouse_genomes_project 4 105237537 105302578 - MGP_BALBcJ_P0066806 Zyg11b protein_coding protein_coding MGP_BALBcJ_T0064910.1 MGP_BALBcJ_G0028088.1 mouse_genomes_project 4 29798541 29829481 + MGP_BALBcJ_P0064910 Gabrr1 protein_coding protein_coding MGP_BALBcJ_T0014725.1 MGP_BALBcJ_G0012822.1 mouse_genomes_project 4 118221819 118222870 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004583.1 MGP_BALBcJ_G0003975.1 mouse_genomes_project 4 147868440 147872580 + Gm13070 antisense antisense MGP_BALBcJ_T0064918.1 MGP_BALBcJ_G0028092.1 mouse_genomes_project 4 29980856 30173395 + MGP_BALBcJ_P0064918 Rngtt protein_coding protein_coding MGP_BALBcJ_T0064919.1 MGP_BALBcJ_G0028092.1 mouse_genomes_project 4 29980873 30171695 + MGP_BALBcJ_P0064919 Rngtt protein_coding protein_coding MGP_BALBcJ_T0064920.1 MGP_BALBcJ_G0028092.1 mouse_genomes_project 4 29992654 29996457 + Rngtt protein_coding processed_transcript MGP_BALBcJ_T0064921.1 MGP_BALBcJ_G0028092.1 mouse_genomes_project 4 29995316 30009885 + Rngtt protein_coding processed_transcript MGP_BALBcJ_T0064922.1 MGP_BALBcJ_G0028092.1 mouse_genomes_project 4 30001741 30029384 + Rngtt protein_coding processed_transcript MGP_BALBcJ_T0014401.1 MGP_BALBcJ_G0012498.1 mouse_genomes_project 4 11220048 11220279 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066240.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85096413 85124441 + Focad protein_coding retained_intron MGP_BALBcJ_T0066241.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85096414 85410264 + MGP_BALBcJ_P0066241 Focad protein_coding protein_coding MGP_BALBcJ_T0066242.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85096429 85192265 + Focad protein_coding retained_intron MGP_BALBcJ_T0066243.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85123927 85410262 + MGP_BALBcJ_P0066243 Focad protein_coding protein_coding MGP_BALBcJ_T0066244.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85127062 85158268 + Focad protein_coding retained_intron MGP_BALBcJ_T0066245.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85309685 85332668 + Focad protein_coding retained_intron MGP_BALBcJ_T0066246.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85355460 85410267 + Focad protein_coding retained_intron MGP_BALBcJ_T0066248.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85396506 85406476 + Focad protein_coding processed_transcript MGP_BALBcJ_T0066249.1 MGP_BALBcJ_G0028400.1 mouse_genomes_project 4 85396721 85410269 + MGP_BALBcJ_P0066249 Focad protein_coding protein_coding MGP_BALBcJ_T0102534.1 MGP_BALBcJ_G0040350.1 mouse_genomes_project 4 112640302 112641281 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101699.1 MGP_BALBcJ_G0039680.1 mouse_genomes_project 4 6367589 6369022 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101700.1 MGP_BALBcJ_G0039680.1 mouse_genomes_project 4 6368262 6369260 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0014801.1 MGP_BALBcJ_G0012898.1 mouse_genomes_project 4 145752422 145752780 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014711.1 MGP_BALBcJ_G0012808.1 mouse_genomes_project 4 115503585 115503793 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069529.1 MGP_BALBcJ_G0029158.1 mouse_genomes_project 4 150311613 150313696 - MGP_BALBcJ_P0069529 Hes3 protein_coding protein_coding MGP_BALBcJ_T0069148.1 MGP_BALBcJ_G0029085.1 mouse_genomes_project 4 143022867 143072740 - MGP_BALBcJ_P0069148 Tnfrsf8 protein_coding protein_coding MGP_BALBcJ_T0069149.1 MGP_BALBcJ_G0029085.1 mouse_genomes_project 4 143022869 143072757 - MGP_BALBcJ_P0069149 Tnfrsf8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069130.1 MGP_BALBcJ_G0029081.1 mouse_genomes_project 4 142527895 142537253 - MGP_BALBcJ_P0069130 Gm438 protein_coding protein_coding MGP_BALBcJ_T0069451.1 MGP_BALBcJ_G0029144.1 mouse_genomes_project 4 149095011 149096891 + MGP_BALBcJ_P0069451 Gm13090 protein_coding protein_coding MGP_BALBcJ_T0068591.1 MGP_BALBcJ_G0028932.1 mouse_genomes_project 4 133033610 133099624 + MGP_BALBcJ_P0068591 Myom3 protein_coding protein_coding MGP_BALBcJ_T0068592.1 MGP_BALBcJ_G0028932.1 mouse_genomes_project 4 133074000 133099624 + Myom3 protein_coding retained_intron MGP_BALBcJ_T0068593.1 MGP_BALBcJ_G0028932.1 mouse_genomes_project 4 133078105 133088624 + Myom3 protein_coding retained_intron MGP_BALBcJ_T0069086.1 MGP_BALBcJ_G0029053.1 mouse_genomes_project 4 140918953 140927619 + MGP_BALBcJ_P0069086 Pramef8 protein_coding protein_coding MGP_BALBcJ_T0069087.1 MGP_BALBcJ_G0029053.1 mouse_genomes_project 4 140919499 140923370 + MGP_BALBcJ_P0069087 Pramef8 protein_coding protein_coding MGP_BALBcJ_T0069088.1 MGP_BALBcJ_G0029053.1 mouse_genomes_project 4 140919514 140927619 + MGP_BALBcJ_P0069088 Pramef8 protein_coding protein_coding MGP_BALBcJ_T0069089.1 MGP_BALBcJ_G0029053.1 mouse_genomes_project 4 140919536 140924197 + MGP_BALBcJ_P0069089 Pramef8 protein_coding protein_coding MGP_BALBcJ_T0069090.1 MGP_BALBcJ_G0029053.1 mouse_genomes_project 4 140919537 140920902 + Pramef8 protein_coding processed_transcript MGP_BALBcJ_T0014708.1 MGP_BALBcJ_G0012805.1 mouse_genomes_project 4 114558853 114559232 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065676.1 MGP_BALBcJ_G0028259.1 mouse_genomes_project 4 46271669 46285216 - MGP_BALBcJ_P0065676 protein_coding protein_coding MGP_BALBcJ_T0065677.1 MGP_BALBcJ_G0028259.1 mouse_genomes_project 4 46277611 46285183 - protein_coding processed_transcript MGP_BALBcJ_T0069498.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150142957 150174646 - MGP_BALBcJ_P0069498 Espn protein_coding protein_coding MGP_BALBcJ_T0069499.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150142962 150174810 - MGP_BALBcJ_P0069499 Espn protein_coding protein_coding MGP_BALBcJ_T0069500.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143483 150151549 - MGP_BALBcJ_P0069500 Espn protein_coding protein_coding MGP_BALBcJ_T0069501.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143494 150174661 - MGP_BALBcJ_P0069501 Espn protein_coding protein_coding MGP_BALBcJ_T0069502.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143496 150154493 - MGP_BALBcJ_P0069502 Espn protein_coding protein_coding MGP_BALBcJ_T0069503.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143508 150154965 - Espn protein_coding processed_transcript MGP_BALBcJ_T0069504.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158953 - MGP_BALBcJ_P0069504 Espn protein_coding protein_coding MGP_BALBcJ_T0069505.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158953 - MGP_BALBcJ_P0069505 Espn protein_coding protein_coding MGP_BALBcJ_T0069506.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158910 - MGP_BALBcJ_P0069506 Espn protein_coding protein_coding MGP_BALBcJ_T0069507.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158953 - MGP_BALBcJ_P0069507 Espn protein_coding protein_coding MGP_BALBcJ_T0069508.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158910 - MGP_BALBcJ_P0069508 Espn protein_coding protein_coding MGP_BALBcJ_T0069509.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158910 - MGP_BALBcJ_P0069509 Espn protein_coding protein_coding MGP_BALBcJ_T0069510.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158953 - MGP_BALBcJ_P0069510 Espn protein_coding protein_coding MGP_BALBcJ_T0069511.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143747 150158910 - MGP_BALBcJ_P0069511 Espn protein_coding protein_coding MGP_BALBcJ_T0069512.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150143758 150154469 - Espn protein_coding processed_transcript MGP_BALBcJ_T0069513.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150145525 150154494 - Espn protein_coding processed_transcript MGP_BALBcJ_T0069514.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150146340 150171490 - MGP_BALBcJ_P0069514 Espn protein_coding protein_coding MGP_BALBcJ_T0069515.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150150417 150154485 - Espn protein_coding processed_transcript MGP_BALBcJ_T0069516.1 MGP_BALBcJ_G0029154.1 mouse_genomes_project 4 150150765 150153858 - Espn protein_coding processed_transcript MGP_BALBcJ_T0007801.1 MGP_BALBcJ_G0006375.1 mouse_genomes_project 4 37062080 37066570 + 4930509K18Rik lincRNA lincRNA MGP_BALBcJ_T0102524.1 MGP_BALBcJ_G0040340.1 mouse_genomes_project 4 93197479 93234071 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008009.1 MGP_BALBcJ_G0006537.1 mouse_genomes_project 4 153861117 153867326 + Gm26840 lincRNA lincRNA MGP_BALBcJ_T0000001.1 MGP_BALBcJ_G0000001.1 mouse_genomes_project 4 114888053 114924524 - Gm17114 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_BALBcJ_T0099836.1 MGP_BALBcJ_G0037872.1 mouse_genomes_project 4 54697362 54697469 - Gm26138 snRNA snRNA MGP_BALBcJ_T0069390.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148219108 148226664 + MGP_BALBcJ_P0069390 Eno1 protein_coding protein_coding MGP_BALBcJ_T0069391.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148219339 148231392 + MGP_BALBcJ_P0069391 Eno1 protein_coding protein_coding MGP_BALBcJ_T0069392.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148219627 148225103 + Eno1 protein_coding retained_intron MGP_BALBcJ_T0069393.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148219627 148227723 + MGP_BALBcJ_P0069393 Eno1 protein_coding protein_coding MGP_BALBcJ_T0069394.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148219630 148222333 + Eno1 protein_coding retained_intron MGP_BALBcJ_T0069395.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148220092 148224518 + MGP_BALBcJ_P0069395 Eno1 protein_coding protein_coding MGP_BALBcJ_T0069396.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148225860 148231386 + MGP_BALBcJ_P0069396 Eno1 protein_coding protein_coding MGP_BALBcJ_T0069397.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148226609 148229241 + Eno1 protein_coding retained_intron MGP_BALBcJ_T0069398.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148228767 148229906 + Eno1 protein_coding retained_intron MGP_BALBcJ_T0069399.1 MGP_BALBcJ_G0029134.1 mouse_genomes_project 4 148229808 148230636 + Eno1 protein_coding retained_intron MGP_BALBcJ_T0007995.1 MGP_BALBcJ_G0006523.1 mouse_genomes_project 4 146289330 146292701 - Gm13200 lincRNA lincRNA MGP_BALBcJ_T0065941.1 MGP_BALBcJ_G0028339.1 mouse_genomes_project 4 59462710 59485697 + MGP_BALBcJ_P0065941 4933430I17Rik protein_coding protein_coding MGP_BALBcJ_T0065942.1 MGP_BALBcJ_G0028339.1 mouse_genomes_project 4 59463156 59485466 + MGP_BALBcJ_P0065942 4933430I17Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0069105.1 MGP_BALBcJ_G0029064.1 mouse_genomes_project 4 141719503 141724599 - MGP_BALBcJ_P0069105 Oog3 protein_coding protein_coding MGP_BALBcJ_T0098942.1 MGP_BALBcJ_G0036989.1 mouse_genomes_project 4 79559441 79561632 - Gm11267 sense_intronic sense_intronic MGP_BALBcJ_T0099891.1 MGP_BALBcJ_G0037927.1 mouse_genomes_project 4 146379380 146379532 - Gm23303 snRNA snRNA MGP_BALBcJ_T0069414.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148897814 148917606 - MGP_BALBcJ_P0069414 Park7 protein_coding protein_coding MGP_BALBcJ_T0069415.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148897814 148912666 - MGP_BALBcJ_P0069415 Park7 protein_coding protein_coding MGP_BALBcJ_T0069416.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148897817 148908647 - MGP_BALBcJ_P0069416 Park7 protein_coding unknown_likely_coding MGP_BALBcJ_T0069417.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148897826 148912366 - MGP_BALBcJ_P0069417 Park7 protein_coding protein_coding MGP_BALBcJ_T0069418.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148897917 148911153 - MGP_BALBcJ_P0069418 Park7 protein_coding protein_coding MGP_BALBcJ_T0069419.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148897920 148912391 - MGP_BALBcJ_P0069419 Park7 protein_coding protein_coding MGP_BALBcJ_T0069420.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148898065 148902517 - Park7 protein_coding processed_transcript MGP_BALBcJ_T0069421.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148901691 148912223 - MGP_BALBcJ_P0069421 Park7 protein_coding protein_coding MGP_BALBcJ_T0069422.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148904240 148912568 - Park7 protein_coding retained_intron MGP_BALBcJ_T0069423.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148905365 148912608 - MGP_BALBcJ_P0069423 Park7 protein_coding protein_coding MGP_BALBcJ_T0069424.1 MGP_BALBcJ_G0029138.1 mouse_genomes_project 4 148905489 148917375 - MGP_BALBcJ_P0069424 Park7 protein_coding protein_coding MGP_BALBcJ_T0007948.1 MGP_BALBcJ_G0006488.1 mouse_genomes_project 4 128125496 128151674 + Gm12973 lincRNA lincRNA MGP_BALBcJ_T0066299.1 MGP_BALBcJ_G0028428.1 mouse_genomes_project 4 90359365 90360742 - MGP_BALBcJ_P0066299 Tusc1 protein_coding protein_coding MGP_BALBcJ_T0014680.1 MGP_BALBcJ_G0012777.1 mouse_genomes_project 4 104759692 104760118 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065544.1 MGP_BALBcJ_G0028225.1 mouse_genomes_project 4 42560999 42566916 + MGP_BALBcJ_P0065544 Aldh1b1 protein_coding protein_coding MGP_BALBcJ_T0065545.1 MGP_BALBcJ_G0028225.1 mouse_genomes_project 4 42561098 42565170 + MGP_BALBcJ_P0065545 Aldh1b1 protein_coding protein_coding MGP_BALBcJ_T0101143.1 MGP_BALBcJ_G0039179.1 mouse_genomes_project 4 78337649 78337780 - Gm25803 snoRNA snoRNA MGP_BALBcJ_T0069386.1 MGP_BALBcJ_G0029133.1 mouse_genomes_project 4 148167065 148181231 - MGP_BALBcJ_P0069386 Car6 protein_coding protein_coding MGP_BALBcJ_T0069387.1 MGP_BALBcJ_G0029133.1 mouse_genomes_project 4 148167065 148178405 - MGP_BALBcJ_P0069387 Car6 protein_coding protein_coding MGP_BALBcJ_T0069388.1 MGP_BALBcJ_G0029133.1 mouse_genomes_project 4 148167262 148176062 - Car6 protein_coding processed_transcript MGP_BALBcJ_T0069389.1 MGP_BALBcJ_G0029133.1 mouse_genomes_project 4 148168331 148178138 - Car6 protein_coding processed_transcript MGP_BALBcJ_T0069456.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149949424 150001254 + MGP_BALBcJ_P0069456 Dnajc11 protein_coding protein_coding MGP_BALBcJ_T0069457.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149949464 149994347 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0069458.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149949467 149975037 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0069459.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149949472 150000335 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0069460.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149949477 150000339 + MGP_BALBcJ_P0069460 Dnajc11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069461.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149963400 149986235 + MGP_BALBcJ_P0069461 Dnajc11 protein_coding protein_coding MGP_BALBcJ_T0069462.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149974684 149989162 + Dnajc11 protein_coding processed_transcript MGP_BALBcJ_T0069463.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149985456 149991949 + Dnajc11 protein_coding processed_transcript MGP_BALBcJ_T0069464.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149987366 149994708 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0069465.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149987435 149989159 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0069466.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149998100 149999853 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0069467.1 MGP_BALBcJ_G0029145.1 mouse_genomes_project 4 149998859 150000344 + Dnajc11 protein_coding retained_intron MGP_BALBcJ_T0014672.1 MGP_BALBcJ_G0012769.1 mouse_genomes_project 4 102574445 102575046 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018021.1 MGP_BALBcJ_G0015491.1 mouse_genomes_project 4 75132001 75134237 + B230208B08Rik processed_transcript processed_transcript MGP_BALBcJ_T0001414.1 MGP_BALBcJ_G0001336.1 mouse_genomes_project 4 105642160 105644448 - TEC TEC MGP_BALBcJ_T0014385.1 MGP_BALBcJ_G0012482.1 mouse_genomes_project 4 6879096 6880025 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014611.1 MGP_BALBcJ_G0012708.1 mouse_genomes_project 4 81641103 81642151 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065460.1 MGP_BALBcJ_G0028211.1 mouse_genomes_project 4 41046983 41110145 + MGP_BALBcJ_P0065460 Melk protein_coding protein_coding MGP_BALBcJ_T0065461.1 MGP_BALBcJ_G0028211.1 mouse_genomes_project 4 41048760 41076381 + MGP_BALBcJ_P0065461 Melk protein_coding protein_coding MGP_BALBcJ_T0065462.1 MGP_BALBcJ_G0028211.1 mouse_genomes_project 4 41049661 41074956 + Melk protein_coding processed_transcript MGP_BALBcJ_T0065463.1 MGP_BALBcJ_G0028211.1 mouse_genomes_project 4 41049661 41068768 + MGP_BALBcJ_P0065463 Melk protein_coding protein_coding MGP_BALBcJ_T0014421.1 MGP_BALBcJ_G0012518.1 mouse_genomes_project 4 14980487 14980933 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099847.1 MGP_BALBcJ_G0037883.1 mouse_genomes_project 4 90638219 90638326 + Gm24796 snRNA snRNA MGP_BALBcJ_T0004586.1 MGP_BALBcJ_G0003978.1 mouse_genomes_project 4 149386152 149389265 + 4930589P08Rik antisense antisense MGP_BALBcJ_T0067338.1 MGP_BALBcJ_G0028643.1 mouse_genomes_project 4 114982150 114985751 - MGP_BALBcJ_P0067338 Artn protein_coding protein_coding MGP_BALBcJ_T0067339.1 MGP_BALBcJ_G0028643.1 mouse_genomes_project 4 114982151 114985485 - MGP_BALBcJ_P0067339 Artn protein_coding protein_coding MGP_BALBcJ_T0067340.1 MGP_BALBcJ_G0028643.1 mouse_genomes_project 4 114984029 114985465 - Artn protein_coding processed_transcript MGP_BALBcJ_T0067341.1 MGP_BALBcJ_G0028643.1 mouse_genomes_project 4 114984131 114985401 - Artn protein_coding processed_transcript MGP_BALBcJ_T0004450.1 MGP_BALBcJ_G0003878.1 mouse_genomes_project 4 79663653 79664560 + Gm11269 antisense antisense MGP_BALBcJ_T0101177.1 MGP_BALBcJ_G0039213.1 mouse_genomes_project 4 129520940 129521145 - Snora73b snoRNA snoRNA MGP_BALBcJ_T0014665.1 MGP_BALBcJ_G0012762.1 mouse_genomes_project 4 100101096 100101312 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069471.1 MGP_BALBcJ_G0029147.1 mouse_genomes_project 4 150008846 150015473 - MGP_BALBcJ_P0069471 Phf13 protein_coding protein_coding MGP_BALBcJ_T0004438.1 MGP_BALBcJ_G0003866.1 mouse_genomes_project 4 43975413 43986662 - Gm12426 antisense antisense MGP_BALBcJ_T0014572.1 MGP_BALBcJ_G0012669.1 mouse_genomes_project 4 68035549 68036020 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014524.1 MGP_BALBcJ_G0012621.1 mouse_genomes_project 4 48692629 48693868 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018058.1 MGP_BALBcJ_G0015515.1 mouse_genomes_project 4 123536290 123537929 + Gm12945 processed_transcript processed_transcript MGP_BALBcJ_T0014476.1 MGP_BALBcJ_G0012573.1 mouse_genomes_project 4 29718942 29719389 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068607.1 MGP_BALBcJ_G0028937.1 mouse_genomes_project 4 133235295 133250729 + MGP_BALBcJ_P0068607 Hmgcl protein_coding protein_coding MGP_BALBcJ_T0068608.1 MGP_BALBcJ_G0028937.1 mouse_genomes_project 4 133235312 133249020 + Hmgcl protein_coding processed_transcript MGP_BALBcJ_T0068609.1 MGP_BALBcJ_G0028937.1 mouse_genomes_project 4 133237655 133246861 + Hmgcl protein_coding processed_transcript MGP_BALBcJ_T0068610.1 MGP_BALBcJ_G0028937.1 mouse_genomes_project 4 133247838 133250729 + Hmgcl protein_coding processed_transcript MGP_BALBcJ_T0068611.1 MGP_BALBcJ_G0028937.1 mouse_genomes_project 4 133248443 133250328 + Hmgcl protein_coding processed_transcript MGP_BALBcJ_T0069078.1 MGP_BALBcJ_G0029049.1 mouse_genomes_project 4 140599679 140707935 - MGP_BALBcJ_P0069078 Prdm2 protein_coding protein_coding MGP_BALBcJ_T0069079.1 MGP_BALBcJ_G0029049.1 mouse_genomes_project 4 140655211 140689891 - MGP_BALBcJ_P0069079 Prdm2 protein_coding protein_coding MGP_BALBcJ_T0069080.1 MGP_BALBcJ_G0029049.1 mouse_genomes_project 4 140655235 140707939 - MGP_BALBcJ_P0069080 Prdm2 protein_coding protein_coding MGP_BALBcJ_T0069081.1 MGP_BALBcJ_G0029049.1 mouse_genomes_project 4 140673382 140708225 - Prdm2 protein_coding processed_transcript MGP_BALBcJ_T0066415.1 MGP_BALBcJ_G0028456.1 mouse_genomes_project 4 95805424 95810787 - MGP_BALBcJ_P0066415 I0C0044D17Rik protein_coding protein_coding MGP_BALBcJ_T0066416.1 MGP_BALBcJ_G0028456.1 mouse_genomes_project 4 95806762 95807272 - MGP_BALBcJ_P0066416 I0C0044D17Rik protein_coding protein_coding MGP_BALBcJ_T0067034.1 MGP_BALBcJ_G0028586.1 mouse_genomes_project 4 112556898 112593202 + MGP_BALBcJ_P0067034 Cyp4a31 protein_coding protein_coding MGP_BALBcJ_T0067035.1 MGP_BALBcJ_G0028586.1 mouse_genomes_project 4 112556898 112562162 + MGP_BALBcJ_P0067035 Cyp4a31 protein_coding protein_coding MGP_BALBcJ_T0067036.1 MGP_BALBcJ_G0028586.1 mouse_genomes_project 4 112556933 112570124 + MGP_BALBcJ_P0067036 Cyp4a31 protein_coding protein_coding MGP_BALBcJ_T0067037.1 MGP_BALBcJ_G0028586.1 mouse_genomes_project 4 112556947 112593200 + MGP_BALBcJ_P0067037 Cyp4a31 protein_coding protein_coding MGP_BALBcJ_T0007791.1 MGP_BALBcJ_G0006365.1 mouse_genomes_project 4 20944806 20945315 - Gm27243 lincRNA lincRNA MGP_BALBcJ_T0068074.1 MGP_BALBcJ_G0028822.1 mouse_genomes_project 4 127224961 127254585 + MGP_BALBcJ_P0068074 Spocd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0068075.1 MGP_BALBcJ_G0028822.1 mouse_genomes_project 4 127245075 127251044 + MGP_BALBcJ_P0068075 Spocd1 protein_coding protein_coding MGP_BALBcJ_T0068076.1 MGP_BALBcJ_G0028822.1 mouse_genomes_project 4 127245249 127254578 + MGP_BALBcJ_P0068076 Spocd1 protein_coding protein_coding MGP_BALBcJ_T0068651.1 MGP_BALBcJ_G0028947.1 mouse_genomes_project 4 133580479 133586141 + MGP_BALBcJ_P0068651 Zfp46 protein_coding protein_coding MGP_BALBcJ_T0068652.1 MGP_BALBcJ_G0028947.1 mouse_genomes_project 4 133580571 133585898 + MGP_BALBcJ_P0068652 Zfp46 protein_coding protein_coding MGP_BALBcJ_T0068653.1 MGP_BALBcJ_G0028947.1 mouse_genomes_project 4 133580865 133582270 + Zfp46 protein_coding processed_transcript MGP_BALBcJ_T0068654.1 MGP_BALBcJ_G0028947.1 mouse_genomes_project 4 133581861 133589780 + MGP_BALBcJ_P0068654 Zfp46 protein_coding protein_coding MGP_BALBcJ_T0068655.1 MGP_BALBcJ_G0028947.1 mouse_genomes_project 4 133581898 133586062 + MGP_BALBcJ_P0068655 Zfp46 protein_coding protein_coding MGP_BALBcJ_T0014743.1 MGP_BALBcJ_G0012840.1 mouse_genomes_project 4 123737289 123737708 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004564.1 MGP_BALBcJ_G0003961.1 mouse_genomes_project 4 139660803 139664350 + Gm13062 antisense antisense MGP_BALBcJ_T0004449.1 MGP_BALBcJ_G0003877.1 mouse_genomes_project 4 79482101 79521721 + Gm11266 antisense antisense MGP_BALBcJ_T0068233.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129499090 129512918 - MGP_BALBcJ_P0068233 Rcc1 protein_coding protein_coding MGP_BALBcJ_T0068234.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129499094 129512876 - MGP_BALBcJ_P0068234 Rcc1 protein_coding protein_coding MGP_BALBcJ_T0068235.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129499094 129520255 - MGP_BALBcJ_P0068235 Rcc1 protein_coding protein_coding MGP_BALBcJ_T0068236.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129504826 129507103 - Rcc1 protein_coding processed_transcript MGP_BALBcJ_T0068237.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129504993 129522227 - MGP_BALBcJ_P0068237 Rcc1 protein_coding protein_coding MGP_BALBcJ_T0068238.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129505885 129512872 - Rcc1 protein_coding retained_intron MGP_BALBcJ_T0068239.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129506131 129512528 - Rcc1 protein_coding retained_intron MGP_BALBcJ_T0068240.1 MGP_BALBcJ_G0028851.1 mouse_genomes_project 4 129506661 129512863 - Rcc1 protein_coding retained_intron MGP_BALBcJ_T0065040.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37746066 37801803 + MGP_BALBcJ_P0065040 Nfx1 protein_coding protein_coding MGP_BALBcJ_T0065041.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37746066 37788417 + MGP_BALBcJ_P0065041 Nfx1 protein_coding protein_coding MGP_BALBcJ_T0065042.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37746066 37789680 + MGP_BALBcJ_P0065042 Nfx1 protein_coding protein_coding MGP_BALBcJ_T0065043.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37777658 37787978 + Nfx1 protein_coding processed_transcript MGP_BALBcJ_T0065044.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37785015 37798134 + Nfx1 protein_coding processed_transcript MGP_BALBcJ_T0065045.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37797178 37800988 + Nfx1 protein_coding processed_transcript MGP_BALBcJ_T0065046.1 MGP_BALBcJ_G0028122.1 mouse_genomes_project 4 37799013 37800350 + Nfx1 protein_coding processed_transcript MGP_BALBcJ_T0102505.1 MGP_BALBcJ_G0040321.1 mouse_genomes_project 4 39439863 39441691 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099840.1 MGP_BALBcJ_G0037876.1 mouse_genomes_project 4 65160885 65161056 + Gm23738 snRNA snRNA MGP_BALBcJ_T0066570.1 MGP_BALBcJ_G0028488.1 mouse_genomes_project 4 100168967 100213512 - MGP_BALBcJ_P0066570 Slc35d1 protein_coding protein_coding MGP_BALBcJ_T0066571.1 MGP_BALBcJ_G0028488.1 mouse_genomes_project 4 100168974 100213151 - MGP_BALBcJ_P0066571 Slc35d1 protein_coding protein_coding MGP_BALBcJ_T0066572.1 MGP_BALBcJ_G0028488.1 mouse_genomes_project 4 100199499 100213151 - MGP_BALBcJ_P0066572 Slc35d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066573.1 MGP_BALBcJ_G0028488.1 mouse_genomes_project 4 100208681 100213147 - Slc35d1 protein_coding retained_intron MGP_BALBcJ_T0066574.1 MGP_BALBcJ_G0028488.1 mouse_genomes_project 4 100208902 100213020 - Slc35d1 protein_coding retained_intron MGP_BALBcJ_T0069365.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147860847 147928442 - MGP_BALBcJ_P0069365 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069366.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147862531 147874247 - MGP_BALBcJ_P0069366 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069367.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147862778 147871720 - MGP_BALBcJ_P0069367 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069368.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147870937 147927204 - MGP_BALBcJ_P0069368 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069369.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147871421 147886902 - MGP_BALBcJ_P0069369 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069370.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147871425 147898718 - MGP_BALBcJ_P0069370 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069371.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147871430 147916066 - MGP_BALBcJ_P0069371 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069372.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147871479 147919573 - MGP_BALBcJ_P0069372 Spsb1 protein_coding protein_coding MGP_BALBcJ_T0069373.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147871572 147928442 - Spsb1 protein_coding processed_transcript MGP_BALBcJ_T0069374.1 MGP_BALBcJ_G0029128.1 mouse_genomes_project 4 147873995 147928430 - Spsb1 protein_coding processed_transcript MGP_BALBcJ_T0066309.1 MGP_BALBcJ_G0028432.1 mouse_genomes_project 4 91604182 91655381 + MGP_BALBcJ_P0066309 Ift74 protein_coding protein_coding MGP_BALBcJ_T0066310.1 MGP_BALBcJ_G0028432.1 mouse_genomes_project 4 91604182 91686057 + MGP_BALBcJ_P0066310 Ift74 protein_coding protein_coding MGP_BALBcJ_T0066313.1 MGP_BALBcJ_G0028432.1 mouse_genomes_project 4 91670785 91679034 + Ift74 protein_coding processed_transcript MGP_BALBcJ_T0069408.1 MGP_BALBcJ_G0029136.1 mouse_genomes_project 4 148616896 148641481 - MGP_BALBcJ_P0069408 Slc45a1 protein_coding protein_coding MGP_BALBcJ_T0069409.1 MGP_BALBcJ_G0029136.1 mouse_genomes_project 4 148618371 148641404 - MGP_BALBcJ_P0069409 Slc45a1 protein_coding protein_coding MGP_BALBcJ_T0069410.1 MGP_BALBcJ_G0029136.1 mouse_genomes_project 4 148632652 148633453 - Slc45a1 protein_coding retained_intron MGP_BALBcJ_T0004530.1 MGP_BALBcJ_G0003935.1 mouse_genomes_project 4 129715229 129716144 + Gm12999 antisense antisense MGP_BALBcJ_T0065628.1 MGP_BALBcJ_G0028246.1 mouse_genomes_project 4 44132418 44190856 + MGP_BALBcJ_P0065628 Tgfbr1 protein_coding protein_coding MGP_BALBcJ_T0065629.1 MGP_BALBcJ_G0028246.1 mouse_genomes_project 4 44132423 44193653 + MGP_BALBcJ_P0065629 Tgfbr1 protein_coding protein_coding MGP_BALBcJ_T0065630.1 MGP_BALBcJ_G0028246.1 mouse_genomes_project 4 44132698 44140414 + Tgfbr1 protein_coding processed_transcript MGP_BALBcJ_T0065631.1 MGP_BALBcJ_G0028246.1 mouse_genomes_project 4 44165318 44189758 + MGP_BALBcJ_P0065631 Tgfbr1 protein_coding protein_coding MGP_BALBcJ_T0067809.1 MGP_BALBcJ_G0028767.1 mouse_genomes_project 4 123897428 123929431 + MGP_BALBcJ_P0067809 Psmb2 protein_coding protein_coding MGP_BALBcJ_T0067810.1 MGP_BALBcJ_G0028767.1 mouse_genomes_project 4 123897477 123907079 + Psmb2 protein_coding processed_transcript MGP_BALBcJ_T0067811.1 MGP_BALBcJ_G0028767.1 mouse_genomes_project 4 123897502 123927480 + Psmb2 protein_coding processed_transcript MGP_BALBcJ_T0014748.1 MGP_BALBcJ_G0012845.1 mouse_genomes_project 4 124264986 124265206 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004560.1 MGP_BALBcJ_G0003960.1 mouse_genomes_project 4 139555145 139559227 + Tmem51os1 antisense antisense MGP_BALBcJ_T0004561.1 MGP_BALBcJ_G0003960.1 mouse_genomes_project 4 139555471 139559258 + Tmem51os1 antisense antisense MGP_BALBcJ_T0004562.1 MGP_BALBcJ_G0003960.1 mouse_genomes_project 4 139555513 139559220 + Tmem51os1 antisense antisense MGP_BALBcJ_T0004563.1 MGP_BALBcJ_G0003960.1 mouse_genomes_project 4 139556029 139559236 + Tmem51os1 antisense antisense MGP_BALBcJ_T0064860.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28607912 28670554 + MGP_BALBcJ_P0064860 Map3k7 protein_coding protein_coding MGP_BALBcJ_T0064861.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28608055 28669026 + MGP_BALBcJ_P0064861 Map3k7 protein_coding protein_coding MGP_BALBcJ_T0064862.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28621151 28634937 + Map3k7 protein_coding processed_transcript MGP_BALBcJ_T0064863.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28623386 28628149 + Map3k7 protein_coding processed_transcript MGP_BALBcJ_T0064864.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28625457 28638955 + Map3k7 protein_coding processed_transcript MGP_BALBcJ_T0064865.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28628094 28662176 + Map3k7 protein_coding processed_transcript MGP_BALBcJ_T0064866.1 MGP_BALBcJ_G0028077.1 mouse_genomes_project 4 28638652 28665728 + Map3k7 protein_coding processed_transcript MGP_BALBcJ_T0014721.1 MGP_BALBcJ_G0012818.1 mouse_genomes_project 4 116646943 116647346 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010623.1 MGP_BALBcJ_G0008748.1 mouse_genomes_project 4 134898116 134898201 + Mir7018 miRNA miRNA MGP_BALBcJ_T0069936.1 MGP_BALBcJ_G0029230.1 mouse_genomes_project 4 154284294 154286017 + MGP_BALBcJ_P0069936 AW011738 protein_coding protein_coding MGP_BALBcJ_T0065185.1 MGP_BALBcJ_G0028159.1 mouse_genomes_project 4 39028534 39030742 + MGP_BALBcJ_P0065185 protein_coding protein_coding MGP_BALBcJ_T0004519.1 MGP_BALBcJ_G0003927.1 mouse_genomes_project 4 125377201 125408712 - Csmd2os antisense antisense MGP_BALBcJ_T0004520.1 MGP_BALBcJ_G0003927.1 mouse_genomes_project 4 125377201 125411634 - Csmd2os antisense antisense MGP_BALBcJ_T0004430.1 MGP_BALBcJ_G0003860.1 mouse_genomes_project 4 41409154 41430153 + Gm12462 antisense antisense MGP_BALBcJ_T0102526.1 MGP_BALBcJ_G0040342.1 mouse_genomes_project 4 98850190 98850463 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0068833.1 MGP_BALBcJ_G0028990.1 mouse_genomes_project 4 136283797 136302216 - MGP_BALBcJ_P0068833 Otud3 protein_coding protein_coding MGP_BALBcJ_T0011545.1 MGP_BALBcJ_G0009670.1 mouse_genomes_project 4 48338962 48339231 + Gm22563 misc_RNA misc_RNA MGP_BALBcJ_T0065195.1 MGP_BALBcJ_G0028166.1 mouse_genomes_project 4 39459689 39460932 - MGP_BALBcJ_P0065195 protein_coding protein_coding MGP_BALBcJ_T0068785.1 MGP_BALBcJ_G0028974.1 mouse_genomes_project 4 135621322 135633689 + MGP_BALBcJ_P0068785 Sh2d5 protein_coding protein_coding MGP_BALBcJ_T0068786.1 MGP_BALBcJ_G0028974.1 mouse_genomes_project 4 135621332 135629645 + MGP_BALBcJ_P0068786 Sh2d5 protein_coding protein_coding MGP_BALBcJ_T0068787.1 MGP_BALBcJ_G0028974.1 mouse_genomes_project 4 135621342 135628054 + Sh2d5 protein_coding processed_transcript MGP_BALBcJ_T0068789.1 MGP_BALBcJ_G0028974.1 mouse_genomes_project 4 135621383 135633689 + MGP_BALBcJ_P0068789 Sh2d5 protein_coding protein_coding MGP_BALBcJ_T0068790.1 MGP_BALBcJ_G0028974.1 mouse_genomes_project 4 135629100 135631468 + Sh2d5 protein_coding retained_intron MGP_BALBcJ_T0014778.1 MGP_BALBcJ_G0012875.1 mouse_genomes_project 4 134718930 134719308 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007803.1 MGP_BALBcJ_G0006377.1 mouse_genomes_project 4 37485340 37487585 - Gm6297 lincRNA lincRNA MGP_BALBcJ_T0014423.1 MGP_BALBcJ_G0012520.1 mouse_genomes_project 4 15351499 15353629 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014677.1 MGP_BALBcJ_G0012774.1 mouse_genomes_project 4 104274095 104274531 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014547.1 MGP_BALBcJ_G0012644.1 mouse_genomes_project 4 52300663 52301091 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011553.1 MGP_BALBcJ_G0009678.1 mouse_genomes_project 4 91426440 91426702 - Gm26410 misc_RNA misc_RNA MGP_BALBcJ_T0067619.1 MGP_BALBcJ_G0028722.1 mouse_genomes_project 4 120467820 120469559 - MGP_BALBcJ_P0067619 protein_coding protein_coding MGP_BALBcJ_T0069863.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153980004 153981849 - Pusl1 protein_coding processed_transcript MGP_BALBcJ_T0069865.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153980987 153984111 - MGP_BALBcJ_P0069865 Pusl1 protein_coding protein_coding MGP_BALBcJ_T0069866.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153982715 153983539 - Pusl1 protein_coding retained_intron MGP_BALBcJ_T0069867.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153982826 153984056 - Pusl1 protein_coding retained_intron MGP_BALBcJ_T0069868.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153983110 153984085 - Pusl1 protein_coding retained_intron MGP_BALBcJ_T0069869.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153983171 153984099 - Pusl1 protein_coding processed_transcript MGP_BALBcJ_T0069870.1 MGP_BALBcJ_G0029218.1 mouse_genomes_project 4 153983381 153984058 - Pusl1 protein_coding retained_intron MGP_BALBcJ_T0004479.1 MGP_BALBcJ_G0003897.1 mouse_genomes_project 4 104807763 104824718 - Lrp8os2 antisense antisense MGP_BALBcJ_T0004480.1 MGP_BALBcJ_G0003897.1 mouse_genomes_project 4 104807763 104812683 - Lrp8os2 antisense antisense MGP_BALBcJ_T0004481.1 MGP_BALBcJ_G0003897.1 mouse_genomes_project 4 104809722 104824670 - Lrp8os2 antisense antisense MGP_BALBcJ_T0004482.1 MGP_BALBcJ_G0003897.1 mouse_genomes_project 4 104812542 104824706 - Lrp8os2 antisense antisense MGP_BALBcJ_T0007810.1 MGP_BALBcJ_G0006384.1 mouse_genomes_project 4 42444246 42484688 + Gm829 lincRNA lincRNA MGP_BALBcJ_T0007811.1 MGP_BALBcJ_G0006384.1 mouse_genomes_project 4 42444246 42454233 + Gm829 lincRNA lincRNA MGP_BALBcJ_T0069654.1 MGP_BALBcJ_G0029178.1 mouse_genomes_project 4 152414183 152427983 + MGP_BALBcJ_P0069654 B230104I21Rik protein_coding protein_coding MGP_BALBcJ_T0069053.1 MGP_BALBcJ_G0029044.1 mouse_genomes_project 4 139289607 139319260 - MGP_BALBcJ_P0069053 Ctrc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069055.1 MGP_BALBcJ_G0029044.1 mouse_genomes_project 4 139311323 139319354 - Ctrc protein_coding processed_transcript MGP_BALBcJ_T0069056.1 MGP_BALBcJ_G0029044.1 mouse_genomes_project 4 139311323 139319280 - MGP_BALBcJ_P0069056 Ctrc protein_coding protein_coding MGP_BALBcJ_T0069057.1 MGP_BALBcJ_G0029044.1 mouse_genomes_project 4 139311328 139319356 - MGP_BALBcJ_P0069057 Ctrc protein_coding protein_coding MGP_BALBcJ_T0069058.1 MGP_BALBcJ_G0029044.1 mouse_genomes_project 4 139317835 139318229 - Ctrc protein_coding processed_transcript MGP_BALBcJ_T0067854.1 MGP_BALBcJ_G0028775.1 mouse_genomes_project 4 124345410 124351330 + MGP_BALBcJ_P0067854 Tmem35b protein_coding protein_coding MGP_BALBcJ_T0067855.1 MGP_BALBcJ_G0028775.1 mouse_genomes_project 4 124347748 124351330 + MGP_BALBcJ_P0067855 Tmem35b protein_coding protein_coding MGP_BALBcJ_T0014663.1 MGP_BALBcJ_G0012760.1 mouse_genomes_project 4 99016614 99021537 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098374.1 MGP_BALBcJ_G0036428.1 mouse_genomes_project 4 139013915 139015625 + pseudogene pseudogene MGP_BALBcJ_T0018080.1 MGP_BALBcJ_G0015526.1 mouse_genomes_project 4 153701322 153718170 - Gm16023 processed_transcript processed_transcript MGP_BALBcJ_T0018081.1 MGP_BALBcJ_G0015526.1 mouse_genomes_project 4 153709612 153717895 - Gm16023 processed_transcript processed_transcript MGP_BALBcJ_T0014762.1 MGP_BALBcJ_G0012859.1 mouse_genomes_project 4 131434799 131435120 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004507.1 MGP_BALBcJ_G0003918.1 mouse_genomes_project 4 120227574 120228557 - Gm12923 antisense antisense MGP_BALBcJ_T0004587.1 MGP_BALBcJ_G0003979.1 mouse_genomes_project 4 150438771 150439234 + Gm16333 antisense antisense MGP_BALBcJ_T0068992.1 MGP_BALBcJ_G0029028.1 mouse_genomes_project 4 138845841 138860075 - MGP_BALBcJ_P0068992 Clcnka protein_coding protein_coding MGP_BALBcJ_T0068993.1 MGP_BALBcJ_G0029028.1 mouse_genomes_project 4 138845841 138860595 - MGP_BALBcJ_P0068993 Clcnka protein_coding protein_coding MGP_BALBcJ_T0068994.1 MGP_BALBcJ_G0029028.1 mouse_genomes_project 4 138853280 138856712 - Clcnka protein_coding retained_intron MGP_BALBcJ_T0068995.1 MGP_BALBcJ_G0029028.1 mouse_genomes_project 4 138857003 138860445 - MGP_BALBcJ_P0068995 Clcnka protein_coding protein_coding MGP_BALBcJ_T0067408.1 MGP_BALBcJ_G0028662.1 mouse_genomes_project 4 115805615 115806557 - MGP_BALBcJ_P0067408 Olfr1338 protein_coding protein_coding MGP_BALBcJ_T0007831.1 MGP_BALBcJ_G0006400.1 mouse_genomes_project 4 54104331 54111546 + Gm12536 lincRNA lincRNA MGP_BALBcJ_T0014788.1 MGP_BALBcJ_G0012885.1 mouse_genomes_project 4 140966658 140968679 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065689.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446686 46453383 + MGP_BALBcJ_P0065689 Rnf20 protein_coding protein_coding MGP_BALBcJ_T0065690.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446740 46471567 + MGP_BALBcJ_P0065690 Rnf20 protein_coding protein_coding MGP_BALBcJ_T0065691.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446740 46464932 + MGP_BALBcJ_P0065691 Rnf20 protein_coding protein_coding MGP_BALBcJ_T0065692.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446746 46471568 + MGP_BALBcJ_P0065692 Rnf20 protein_coding protein_coding MGP_BALBcJ_T0065693.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446773 46459220 + MGP_BALBcJ_P0065693 Rnf20 protein_coding protein_coding MGP_BALBcJ_T0065694.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446817 46454694 + Rnf20 protein_coding processed_transcript MGP_BALBcJ_T0065695.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46446839 46457640 + Rnf20 protein_coding processed_transcript MGP_BALBcJ_T0065696.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46456398 46463120 + Rnf20 protein_coding processed_transcript MGP_BALBcJ_T0065697.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46464943 46467507 + Rnf20 protein_coding processed_transcript MGP_BALBcJ_T0065698.1 MGP_BALBcJ_G0028265.1 mouse_genomes_project 4 46465648 46467231 + Rnf20 protein_coding processed_transcript MGP_BALBcJ_T0098601.1 MGP_BALBcJ_G0036655.1 mouse_genomes_project 4 79409756 79409861 + n-R5s188 rRNA rRNA MGP_BALBcJ_T0068319.1 MGP_BALBcJ_G0028869.1 mouse_genomes_project 4 130398626 130401144 - MGP_BALBcJ_P0068319 Gpr3 protein_coding protein_coding MGP_BALBcJ_T0068320.1 MGP_BALBcJ_G0028869.1 mouse_genomes_project 4 130399653 130401822 - MGP_BALBcJ_P0068320 Gpr3 protein_coding protein_coding MGP_BALBcJ_T0068321.1 MGP_BALBcJ_G0028869.1 mouse_genomes_project 4 130400356 130401600 - MGP_BALBcJ_P0068321 Gpr3 protein_coding protein_coding MGP_BALBcJ_T0004535.1 MGP_BALBcJ_G0003939.1 mouse_genomes_project 4 132408135 132409000 - Gm16224 antisense antisense MGP_BALBcJ_T0066268.1 MGP_BALBcJ_G0028414.1 mouse_genomes_project 4 85828371 85829418 + MGP_BALBcJ_P0066268 protein_coding protein_coding MGP_BALBcJ_T0066677.1 MGP_BALBcJ_G0028513.1 mouse_genomes_project 4 104095450 104106767 + MGP_BALBcJ_P0066677 Cdcp2 protein_coding protein_coding MGP_BALBcJ_T0011539.1 MGP_BALBcJ_G0009664.1 mouse_genomes_project 4 31133564 31133670 + Gm23466 misc_RNA misc_RNA MGP_BALBcJ_T0007905.1 MGP_BALBcJ_G0006459.1 mouse_genomes_project 4 112836550 112840358 + Gm12847 lincRNA lincRNA MGP_BALBcJ_T0014656.1 MGP_BALBcJ_G0012753.1 mouse_genomes_project 4 97549579 97550524 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014373.1 MGP_BALBcJ_G0012470.1 mouse_genomes_project 4 2352085 2353057 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008006.1 MGP_BALBcJ_G0006534.1 mouse_genomes_project 4 151975392 151976673 + Gm13115 lincRNA lincRNA MGP_BALBcJ_T0014802.1 MGP_BALBcJ_G0012899.1 mouse_genomes_project 4 145823773 145824094 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069033.1 MGP_BALBcJ_G0029037.1 mouse_genomes_project 4 139095570 139136582 - MGP_BALBcJ_P0069033 Plekhm2 protein_coding protein_coding MGP_BALBcJ_T0069034.1 MGP_BALBcJ_G0029037.1 mouse_genomes_project 4 139095570 139137363 - MGP_BALBcJ_P0069034 Plekhm2 protein_coding protein_coding MGP_BALBcJ_T0069035.1 MGP_BALBcJ_G0029037.1 mouse_genomes_project 4 139098780 139099968 - Plekhm2 protein_coding retained_intron MGP_BALBcJ_T0069036.1 MGP_BALBcJ_G0029037.1 mouse_genomes_project 4 139100877 139101478 - Plekhm2 protein_coding retained_intron MGP_BALBcJ_T0069037.1 MGP_BALBcJ_G0029037.1 mouse_genomes_project 4 139102912 139112106 - Plekhm2 protein_coding retained_intron MGP_BALBcJ_T0069038.1 MGP_BALBcJ_G0029037.1 mouse_genomes_project 4 139111227 139112676 - Plekhm2 protein_coding retained_intron MGP_BALBcJ_T0067594.1 MGP_BALBcJ_G0028713.1 mouse_genomes_project 4 120137010 120181288 + Trit1 protein_coding processed_transcript MGP_BALBcJ_T0067595.1 MGP_BALBcJ_G0028713.1 mouse_genomes_project 4 120137010 120181288 + MGP_BALBcJ_P0067595 Trit1 protein_coding protein_coding MGP_BALBcJ_T0067596.1 MGP_BALBcJ_G0028713.1 mouse_genomes_project 4 120175094 120180542 + Trit1 protein_coding processed_transcript MGP_BALBcJ_T0014783.1 MGP_BALBcJ_G0012880.1 mouse_genomes_project 4 139441547 139442112 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014475.1 MGP_BALBcJ_G0012572.1 mouse_genomes_project 4 29665581 29665908 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069631.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152243901 152350953 + MGP_BALBcJ_P0069631 Megf6 protein_coding protein_coding MGP_BALBcJ_T0069632.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152312443 152346979 + MGP_BALBcJ_P0069632 Megf6 protein_coding protein_coding MGP_BALBcJ_T0069633.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152324288 152327211 + Megf6 protein_coding retained_intron MGP_BALBcJ_T0069634.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152339873 152350424 + Megf6 protein_coding processed_transcript MGP_BALBcJ_T0069635.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152341429 152345789 + MGP_BALBcJ_P0069635 Megf6 protein_coding protein_coding MGP_BALBcJ_T0069636.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152345044 152349368 + Megf6 protein_coding retained_intron MGP_BALBcJ_T0069637.1 MGP_BALBcJ_G0029175.1 mouse_genomes_project 4 152345139 152346295 + Megf6 protein_coding retained_intron MGP_BALBcJ_T0014738.1 MGP_BALBcJ_G0012835.1 mouse_genomes_project 4 121068248 121068796 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014508.1 MGP_BALBcJ_G0012605.1 mouse_genomes_project 4 41886892 41887251 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014681.1 MGP_BALBcJ_G0012778.1 mouse_genomes_project 4 105312292 105313088 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007901.1 MGP_BALBcJ_G0006455.1 mouse_genomes_project 4 104963009 104969810 + 4930407G08Rik lincRNA lincRNA MGP_BALBcJ_T0007774.1 MGP_BALBcJ_G0006350.1 mouse_genomes_project 4 7561549 7565745 + Gm11827 lincRNA lincRNA MGP_BALBcJ_T0007775.1 MGP_BALBcJ_G0006350.1 mouse_genomes_project 4 7562704 7565745 + Gm11827 lincRNA lincRNA MGP_BALBcJ_T0007894.1 MGP_BALBcJ_G0006452.1 mouse_genomes_project 4 104680101 104758652 + 1700047F07Rik lincRNA lincRNA MGP_BALBcJ_T0007895.1 MGP_BALBcJ_G0006452.1 mouse_genomes_project 4 104680133 104703924 + 1700047F07Rik lincRNA lincRNA MGP_BALBcJ_T0007896.1 MGP_BALBcJ_G0006452.1 mouse_genomes_project 4 104702370 104716398 + 1700047F07Rik lincRNA lincRNA MGP_BALBcJ_T0007897.1 MGP_BALBcJ_G0006452.1 mouse_genomes_project 4 104702393 104703981 + 1700047F07Rik lincRNA lincRNA MGP_BALBcJ_T0014512.1 MGP_BALBcJ_G0012609.1 mouse_genomes_project 4 43042803 43043727 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018031.1 MGP_BALBcJ_G0015499.1 mouse_genomes_project 4 92454328 92457777 + Gm12707 processed_transcript processed_transcript MGP_BALBcJ_T0102551.1 MGP_BALBcJ_G0040367.1 mouse_genomes_project 4 141117609 141120953 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101096.1 MGP_BALBcJ_G0039132.1 mouse_genomes_project 4 388000 388137 - Gm24125 snoRNA snoRNA MGP_BALBcJ_T0065889.1 MGP_BALBcJ_G0028320.1 mouse_genomes_project 4 56648015 56748546 + MGP_BALBcJ_P0065889 Snx30 protein_coding protein_coding MGP_BALBcJ_T0065890.1 MGP_BALBcJ_G0028320.1 mouse_genomes_project 4 56648055 56676234 + Snx30 protein_coding processed_transcript MGP_BALBcJ_T0065891.1 MGP_BALBcJ_G0028320.1 mouse_genomes_project 4 56728486 56744334 + Snx30 protein_coding processed_transcript MGP_BALBcJ_T0065892.1 MGP_BALBcJ_G0028320.1 mouse_genomes_project 4 56728572 56738358 + Snx30 protein_coding processed_transcript MGP_BALBcJ_T0066966.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108869211 108896396 - MGP_BALBcJ_P0066966 Slc5a9 protein_coding protein_coding MGP_BALBcJ_T0066967.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108869265 108878063 - Slc5a9 protein_coding processed_transcript MGP_BALBcJ_T0066968.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108870109 108892242 - MGP_BALBcJ_P0066968 Slc5a9 protein_coding protein_coding MGP_BALBcJ_T0066969.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108871081 108896232 - MGP_BALBcJ_P0066969 Slc5a9 protein_coding protein_coding MGP_BALBcJ_T0066970.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108871326 108874475 - Slc5a9 protein_coding processed_transcript MGP_BALBcJ_T0066971.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108883712 108889859 - MGP_BALBcJ_P0066971 Slc5a9 protein_coding protein_coding MGP_BALBcJ_T0066972.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108884041 108885541 - Slc5a9 protein_coding processed_transcript MGP_BALBcJ_T0066973.1 MGP_BALBcJ_G0028562.1 mouse_genomes_project 4 108884080 108884806 - Slc5a9 protein_coding processed_transcript MGP_BALBcJ_T0014781.1 MGP_BALBcJ_G0012878.1 mouse_genomes_project 4 138534661 138535476 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014727.1 MGP_BALBcJ_G0012824.1 mouse_genomes_project 4 118463747 118463988 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014461.1 MGP_BALBcJ_G0012558.1 mouse_genomes_project 4 25209466 25209883 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007787.1 MGP_BALBcJ_G0006361.1 mouse_genomes_project 4 19023682 19027003 + Gm30731 lincRNA lincRNA MGP_BALBcJ_T0065180.1 MGP_BALBcJ_G0028154.1 mouse_genomes_project 4 38595238 38597499 - MGP_BALBcJ_P0065180 protein_coding protein_coding MGP_BALBcJ_T0067245.1 MGP_BALBcJ_G0028626.1 mouse_genomes_project 4 114164808 114166366 + MGP_BALBcJ_P0067245 Tctex1d4 protein_coding protein_coding MGP_BALBcJ_T0067246.1 MGP_BALBcJ_G0028626.1 mouse_genomes_project 4 114164827 114166767 + MGP_BALBcJ_P0067246 Tctex1d4 protein_coding protein_coding MGP_BALBcJ_T0067247.1 MGP_BALBcJ_G0028626.1 mouse_genomes_project 4 114165188 114166545 + MGP_BALBcJ_P0067247 Tctex1d4 protein_coding protein_coding MGP_BALBcJ_T0018059.1 MGP_BALBcJ_G0015516.1 mouse_genomes_project 4 124252333 124255620 + Gm12940 processed_transcript processed_transcript MGP_BALBcJ_T0018060.1 MGP_BALBcJ_G0015516.1 mouse_genomes_project 4 124254050 124255620 + Gm12940 processed_transcript processed_transcript MGP_BALBcJ_T0018061.1 MGP_BALBcJ_G0015516.1 mouse_genomes_project 4 124254287 124268002 + Gm12940 processed_transcript processed_transcript MGP_BALBcJ_T0018062.1 MGP_BALBcJ_G0015516.1 mouse_genomes_project 4 124254388 124255558 + Gm12940 processed_transcript processed_transcript MGP_BALBcJ_T0007884.1 MGP_BALBcJ_G0006444.1 mouse_genomes_project 4 98357506 98362991 + Gm12798 lincRNA lincRNA MGP_BALBcJ_T0010627.1 MGP_BALBcJ_G0008752.1 mouse_genomes_project 4 137044472 137044542 + Mir7020 miRNA miRNA MGP_BALBcJ_T0069340.1 MGP_BALBcJ_G0029124.1 mouse_genomes_project 4 147543028 147608687 + MGP_BALBcJ_P0069340 Clstn1 protein_coding protein_coding MGP_BALBcJ_T0069341.1 MGP_BALBcJ_G0029124.1 mouse_genomes_project 4 147543212 147608691 + MGP_BALBcJ_P0069341 Clstn1 protein_coding protein_coding MGP_BALBcJ_T0069342.1 MGP_BALBcJ_G0029124.1 mouse_genomes_project 4 147543808 147586506 + Clstn1 protein_coding processed_transcript MGP_BALBcJ_T0069343.1 MGP_BALBcJ_G0029124.1 mouse_genomes_project 4 147586310 147591307 + Clstn1 protein_coding retained_intron MGP_BALBcJ_T0068754.1 MGP_BALBcJ_G0028971.1 mouse_genomes_project 4 135239318 135291995 + MGP_BALBcJ_P0068754 Ece1 protein_coding protein_coding MGP_BALBcJ_T0068755.1 MGP_BALBcJ_G0028971.1 mouse_genomes_project 4 135291611 135314271 + MGP_BALBcJ_P0068755 Ece1 protein_coding protein_coding MGP_BALBcJ_T0068756.1 MGP_BALBcJ_G0028971.1 mouse_genomes_project 4 135291822 135304464 + Ece1 protein_coding processed_transcript MGP_BALBcJ_T0068757.1 MGP_BALBcJ_G0028971.1 mouse_genomes_project 4 135291866 135344741 + MGP_BALBcJ_P0068757 Ece1 protein_coding protein_coding MGP_BALBcJ_T0067648.1 MGP_BALBcJ_G0028727.1 mouse_genomes_project 4 121070734 121076921 + MGP_BALBcJ_P0067648 Mycbp protein_coding protein_coding MGP_BALBcJ_T0067649.1 MGP_BALBcJ_G0028727.1 mouse_genomes_project 4 121070824 121079302 + MGP_BALBcJ_P0067649 Mycbp protein_coding protein_coding MGP_BALBcJ_T0067650.1 MGP_BALBcJ_G0028727.1 mouse_genomes_project 4 121070861 121075570 + Mycbp protein_coding processed_transcript MGP_BALBcJ_T0067651.1 MGP_BALBcJ_G0028727.1 mouse_genomes_project 4 121070956 121077087 + Mycbp protein_coding processed_transcript MGP_BALBcJ_T0014653.1 MGP_BALBcJ_G0012750.1 mouse_genomes_project 4 96457843 96458842 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004598.1 MGP_BALBcJ_G0003988.1 mouse_genomes_project 4 153822576 153824753 - 1500002C15Rik antisense antisense MGP_BALBcJ_T0004599.1 MGP_BALBcJ_G0003988.1 mouse_genomes_project 4 153822579 153824653 - 1500002C15Rik antisense antisense MGP_BALBcJ_T0069219.1 MGP_BALBcJ_G0029103.1 mouse_genomes_project 4 146171718 146220575 - MGP_BALBcJ_P0069219 Ptchd2 protein_coding protein_coding MGP_BALBcJ_T0069220.1 MGP_BALBcJ_G0029103.1 mouse_genomes_project 4 146190320 146192949 - Ptchd2 protein_coding retained_intron MGP_BALBcJ_T0069221.1 MGP_BALBcJ_G0029103.1 mouse_genomes_project 4 146191988 146193429 - Ptchd2 protein_coding processed_transcript MGP_BALBcJ_T0014660.1 MGP_BALBcJ_G0012757.1 mouse_genomes_project 4 98312747 98313461 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018027.1 MGP_BALBcJ_G0015496.1 mouse_genomes_project 4 91453140 91469242 - Gm12655 processed_transcript processed_transcript MGP_BALBcJ_T0018028.1 MGP_BALBcJ_G0015496.1 mouse_genomes_project 4 91454218 91469229 - Gm12655 processed_transcript processed_transcript MGP_BALBcJ_T0067146.1 MGP_BALBcJ_G0028607.1 mouse_genomes_project 4 113536726 113567494 + MGP_BALBcJ_P0067146 Ipp protein_coding protein_coding MGP_BALBcJ_T0067147.1 MGP_BALBcJ_G0028607.1 mouse_genomes_project 4 113536729 113567502 + MGP_BALBcJ_P0067147 Ipp protein_coding protein_coding MGP_BALBcJ_T0007939.1 MGP_BALBcJ_G0006483.1 mouse_genomes_project 4 126575718 126584551 + Gm26722 lincRNA lincRNA MGP_BALBcJ_T0101116.1 MGP_BALBcJ_G0039152.1 mouse_genomes_project 4 39862454 39862584 - Gm23709 snoRNA snoRNA MGP_BALBcJ_T0017994.1 MGP_BALBcJ_G0015473.1 mouse_genomes_project 4 12646619 12748867 + A530072M11Rik processed_transcript processed_transcript MGP_BALBcJ_T0069296.1 MGP_BALBcJ_G0029117.1 mouse_genomes_project 4 147100958 147117661 - MGP_BALBcJ_P0069296 Pgd protein_coding protein_coding MGP_BALBcJ_T0069297.1 MGP_BALBcJ_G0029117.1 mouse_genomes_project 4 147106145 147110953 - Pgd protein_coding retained_intron MGP_BALBcJ_T0069298.1 MGP_BALBcJ_G0029117.1 mouse_genomes_project 4 147110880 147117725 - Pgd protein_coding retained_intron MGP_BALBcJ_T0069299.1 MGP_BALBcJ_G0029117.1 mouse_genomes_project 4 147111246 147112608 - Pgd protein_coding retained_intron MGP_BALBcJ_T0069300.1 MGP_BALBcJ_G0029117.1 mouse_genomes_project 4 147112337 147117614 - Pgd protein_coding retained_intron MGP_BALBcJ_T0004572.1 MGP_BALBcJ_G0003968.1 mouse_genomes_project 4 146909934 146917592 + Gm17029 antisense antisense MGP_BALBcJ_T0004573.1 MGP_BALBcJ_G0003968.1 mouse_genomes_project 4 146909963 146934985 + Gm17029 antisense antisense MGP_BALBcJ_T0004574.1 MGP_BALBcJ_G0003968.1 mouse_genomes_project 4 146909997 146916627 + Gm17029 antisense antisense MGP_BALBcJ_T0102548.1 MGP_BALBcJ_G0040364.1 mouse_genomes_project 4 140907312 140908382 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099860.1 MGP_BALBcJ_G0037896.1 mouse_genomes_project 4 106010433 106010538 - Gm23589 snRNA snRNA MGP_BALBcJ_T0101134.1 MGP_BALBcJ_G0039170.1 mouse_genomes_project 4 61407558 61407687 + Gm23950 snoRNA snoRNA MGP_BALBcJ_T0014635.1 MGP_BALBcJ_G0012732.1 mouse_genomes_project 4 90290644 90291520 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067640.1 MGP_BALBcJ_G0028725.1 mouse_genomes_project 4 120888032 120903191 - MGP_BALBcJ_P0067640 Akirin1 protein_coding unknown_likely_coding MGP_BALBcJ_T0067641.1 MGP_BALBcJ_G0028725.1 mouse_genomes_project 4 120890188 120896549 - Akirin1 protein_coding processed_transcript MGP_BALBcJ_T0067642.1 MGP_BALBcJ_G0028725.1 mouse_genomes_project 4 120891314 120903288 - Akirin1 protein_coding processed_transcript MGP_BALBcJ_T0069119.1 MGP_BALBcJ_G0029071.1 mouse_genomes_project 4 142103340 142114560 - MGP_BALBcJ_P0069119 Gm13125 protein_coding protein_coding MGP_BALBcJ_T0014495.1 MGP_BALBcJ_G0012592.1 mouse_genomes_project 4 36587904 36588823 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067864.1 MGP_BALBcJ_G0028780.1 mouse_genomes_project 4 124576793 124579791 - MGP_BALBcJ_P0067864 Gjb4 protein_coding protein_coding MGP_BALBcJ_T0067865.1 MGP_BALBcJ_G0028780.1 mouse_genomes_project 4 124576793 124579791 - MGP_BALBcJ_P0067865 Gjb4 protein_coding protein_coding MGP_BALBcJ_T0067956.1 MGP_BALBcJ_G0028799.1 mouse_genomes_project 4 126472633 126480967 - MGP_BALBcJ_P0067956 C77080 protein_coding protein_coding MGP_BALBcJ_T0067957.1 MGP_BALBcJ_G0028799.1 mouse_genomes_project 4 126472633 126500144 - MGP_BALBcJ_P0067957 C77080 protein_coding protein_coding MGP_BALBcJ_T0067958.1 MGP_BALBcJ_G0028799.1 mouse_genomes_project 4 126472638 126511906 - MGP_BALBcJ_P0067958 C77080 protein_coding protein_coding MGP_BALBcJ_T0067959.1 MGP_BALBcJ_G0028799.1 mouse_genomes_project 4 126478415 126525946 - MGP_BALBcJ_P0067959 C77080 protein_coding protein_coding MGP_BALBcJ_T0068266.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129824921 129878759 + MGP_BALBcJ_P0068266 Eya3 protein_coding protein_coding MGP_BALBcJ_T0068267.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129824980 129907998 + MGP_BALBcJ_P0068267 Eya3 protein_coding protein_coding MGP_BALBcJ_T0068268.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129824990 129907995 + MGP_BALBcJ_P0068268 Eya3 protein_coding protein_coding MGP_BALBcJ_T0068269.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129824992 129882962 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068270.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129824998 129876971 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068271.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129825013 129904091 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068272.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129825019 129905433 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068273.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129825019 129905291 + MGP_BALBcJ_P0068273 Eya3 protein_coding protein_coding MGP_BALBcJ_T0068274.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129825051 129878944 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068275.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129842813 129905399 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068276.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129884893 129895910 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0068277.1 MGP_BALBcJ_G0028858.1 mouse_genomes_project 4 129888275 129903602 + Eya3 protein_coding processed_transcript MGP_BALBcJ_T0014606.1 MGP_BALBcJ_G0012703.1 mouse_genomes_project 4 79617497 79617764 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067597.1 MGP_BALBcJ_G0028714.1 mouse_genomes_project 4 120243183 120267305 + MGP_BALBcJ_P0067597 Bmp8b protein_coding protein_coding MGP_BALBcJ_T0067598.1 MGP_BALBcJ_G0028714.1 mouse_genomes_project 4 120256866 120273270 + Bmp8b protein_coding processed_transcript MGP_BALBcJ_T0066592.1 MGP_BALBcJ_G0028493.1 mouse_genomes_project 4 101816282 101850539 - C8a protein_coding processed_transcript MGP_BALBcJ_T0066593.1 MGP_BALBcJ_G0028493.1 mouse_genomes_project 4 101816282 101870644 - MGP_BALBcJ_P0066593 C8a protein_coding protein_coding MGP_BALBcJ_T0066594.1 MGP_BALBcJ_G0028493.1 mouse_genomes_project 4 101818112 101870602 - MGP_BALBcJ_P0066594 C8a protein_coding protein_coding MGP_BALBcJ_T0004522.1 MGP_BALBcJ_G0003929.1 mouse_genomes_project 4 126186078 126193639 + antisense antisense MGP_BALBcJ_T0066274.1 MGP_BALBcJ_G0028420.1 mouse_genomes_project 4 85911923 85912587 - MGP_BALBcJ_P0066274 Ifne protein_coding protein_coding MGP_BALBcJ_T0099810.1 MGP_BALBcJ_G0037846.1 mouse_genomes_project 4 6153183 6153346 - Gm24152 snRNA snRNA MGP_BALBcJ_T0066372.1 MGP_BALBcJ_G0028448.1 mouse_genomes_project 4 93697657 93759082 - MGP_BALBcJ_P0066372 Gm12695 protein_coding protein_coding MGP_BALBcJ_T0018051.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122114015 122115606 + 9930104L06Rik processed_transcript processed_transcript MGP_BALBcJ_T0018052.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122114025 122116422 + 9930104L06Rik processed_transcript retained_intron MGP_BALBcJ_T0018053.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122114029 122119871 + 9930104L06Rik processed_transcript processed_transcript MGP_BALBcJ_T0018054.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122114032 122121916 + 9930104L06Rik processed_transcript retained_intron MGP_BALBcJ_T0018055.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122114041 122121917 + 9930104L06Rik processed_transcript processed_transcript MGP_BALBcJ_T0018056.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122115745 122120020 + 9930104L06Rik processed_transcript processed_transcript MGP_BALBcJ_T0018057.1 MGP_BALBcJ_G0015514.1 mouse_genomes_project 4 122120391 122121125 + 9930104L06Rik processed_transcript processed_transcript MGP_BALBcJ_T0069468.1 MGP_BALBcJ_G0029146.1 mouse_genomes_project 4 150001754 150008211 - MGP_BALBcJ_P0069468 Thap3 protein_coding protein_coding MGP_BALBcJ_T0069469.1 MGP_BALBcJ_G0029146.1 mouse_genomes_project 4 150001917 150008184 - MGP_BALBcJ_P0069469 Thap3 protein_coding protein_coding MGP_BALBcJ_T0069470.1 MGP_BALBcJ_G0029146.1 mouse_genomes_project 4 150004569 150008194 - Thap3 protein_coding retained_intron MGP_BALBcJ_T0069920.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196201 154213768 + MGP_BALBcJ_P0069920 9430015G10Rik protein_coding protein_coding MGP_BALBcJ_T0069921.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196204 154213768 + 9430015G10Rik protein_coding processed_transcript MGP_BALBcJ_T0069922.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196217 154213766 + MGP_BALBcJ_P0069922 9430015G10Rik protein_coding protein_coding MGP_BALBcJ_T0069923.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196218 154212722 + MGP_BALBcJ_P0069923 9430015G10Rik protein_coding protein_coding MGP_BALBcJ_T0069924.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196238 154208686 + 9430015G10Rik protein_coding processed_transcript MGP_BALBcJ_T0069925.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196249 154208920 + 9430015G10Rik protein_coding processed_transcript MGP_BALBcJ_T0069926.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154196258 154202868 + 9430015G10Rik protein_coding processed_transcript MGP_BALBcJ_T0069927.1 MGP_BALBcJ_G0029227.1 mouse_genomes_project 4 154200204 154206026 + 9430015G10Rik protein_coding processed_transcript MGP_BALBcJ_T0066266.1 MGP_BALBcJ_G0028412.1 mouse_genomes_project 4 85718673 85719711 + MGP_BALBcJ_P0066266 Gm26566 protein_coding protein_coding MGP_BALBcJ_T0001428.1 MGP_BALBcJ_G0001349.1 mouse_genomes_project 4 149931320 149931742 - TEC TEC MGP_BALBcJ_T0010591.1 MGP_BALBcJ_G0008716.1 mouse_genomes_project 4 98296839 98296922 - Mir101a miRNA miRNA MGP_BALBcJ_T0068942.1 MGP_BALBcJ_G0029018.1 mouse_genomes_project 4 138459741 138465138 + MGP_BALBcJ_P0068942 Mfap2 protein_coding protein_coding MGP_BALBcJ_T0068943.1 MGP_BALBcJ_G0029018.1 mouse_genomes_project 4 138459960 138464336 + Mfap2 protein_coding processed_transcript MGP_BALBcJ_T0068944.1 MGP_BALBcJ_G0029018.1 mouse_genomes_project 4 138459967 138465308 + MGP_BALBcJ_P0068944 Mfap2 protein_coding protein_coding MGP_BALBcJ_T0066807.1 MGP_BALBcJ_G0028534.1 mouse_genomes_project 4 105334227 105347627 + MGP_BALBcJ_P0066807 Coa7 protein_coding protein_coding MGP_BALBcJ_T0066808.1 MGP_BALBcJ_G0028534.1 mouse_genomes_project 4 105334240 105344534 + Coa7 protein_coding processed_transcript MGP_BALBcJ_T0066809.1 MGP_BALBcJ_G0028534.1 mouse_genomes_project 4 105334243 105344766 + Coa7 protein_coding processed_transcript MGP_BALBcJ_T0066810.1 MGP_BALBcJ_G0028534.1 mouse_genomes_project 4 105334265 105344261 + Coa7 protein_coding processed_transcript MGP_BALBcJ_T0066811.1 MGP_BALBcJ_G0028534.1 mouse_genomes_project 4 105334276 105338728 + Coa7 protein_coding processed_transcript MGP_BALBcJ_T0066847.1 MGP_BALBcJ_G0028543.1 mouse_genomes_project 4 105830039 105850183 - MGP_BALBcJ_P0066847 Btf3l4 protein_coding protein_coding MGP_BALBcJ_T0066848.1 MGP_BALBcJ_G0028543.1 mouse_genomes_project 4 105835186 105842611 - Btf3l4 protein_coding processed_transcript MGP_BALBcJ_T0066849.1 MGP_BALBcJ_G0028543.1 mouse_genomes_project 4 105842118 105847148 - Btf3l4 protein_coding processed_transcript MGP_BALBcJ_T0010578.1 MGP_BALBcJ_G0008703.1 mouse_genomes_project 4 53691367 53691437 - Mir32 miRNA miRNA MGP_BALBcJ_T0004569.1 MGP_BALBcJ_G0003965.1 mouse_genomes_project 4 146521050 146522333 - Gm13209 antisense antisense MGP_BALBcJ_T0067025.1 MGP_BALBcJ_G0028579.1 mouse_genomes_project 4 112131049 112147066 - MGP_BALBcJ_P0067025 Cyp4a29 protein_coding protein_coding MGP_BALBcJ_T0067493.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116629969 116667119 + MGP_BALBcJ_P0067493 protein_coding protein_coding MGP_BALBcJ_T0067494.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116632650 116682047 + MGP_BALBcJ_P0067494 protein_coding protein_coding MGP_BALBcJ_T0067495.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116632657 116696855 + protein_coding retained_intron MGP_BALBcJ_T0067496.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116632663 116682056 + MGP_BALBcJ_P0067496 protein_coding protein_coding MGP_BALBcJ_T0067497.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116632672 116656378 + protein_coding retained_intron MGP_BALBcJ_T0067498.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116632744 116667146 + MGP_BALBcJ_P0067498 protein_coding protein_coding MGP_BALBcJ_T0067499.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116632769 116720974 + MGP_BALBcJ_P0067499 protein_coding unknown_likely_coding MGP_BALBcJ_T0067500.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116633487 116667247 + MGP_BALBcJ_P0067500 protein_coding protein_coding MGP_BALBcJ_T0067501.1 MGP_BALBcJ_G0028685.1 mouse_genomes_project 4 116714115 116716186 + protein_coding processed_transcript MGP_BALBcJ_T0066474.1 MGP_BALBcJ_G0028470.1 mouse_genomes_project 4 97978530 97978929 - MGP_BALBcJ_P0066474 Gm10577 protein_coding protein_coding MGP_BALBcJ_T0067729.1 MGP_BALBcJ_G0028751.1 mouse_genomes_project 4 123261165 123294255 + MGP_BALBcJ_P0067729 Oscp1 protein_coding protein_coding MGP_BALBcJ_T0067730.1 MGP_BALBcJ_G0028751.1 mouse_genomes_project 4 123261281 123294263 + MGP_BALBcJ_P0067730 Oscp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0067731.1 MGP_BALBcJ_G0028751.1 mouse_genomes_project 4 123267551 123290534 + Oscp1 protein_coding processed_transcript MGP_BALBcJ_T0067732.1 MGP_BALBcJ_G0028751.1 mouse_genomes_project 4 123285004 123286503 + Oscp1 protein_coding processed_transcript MGP_BALBcJ_T0067733.1 MGP_BALBcJ_G0028751.1 mouse_genomes_project 4 123289771 123290752 + Oscp1 protein_coding processed_transcript MGP_BALBcJ_T0065426.1 MGP_BALBcJ_G0028207.1 mouse_genomes_project 4 40722546 40724487 + MGP_BALBcJ_P0065426 Ccin protein_coding protein_coding MGP_BALBcJ_T0014527.1 MGP_BALBcJ_G0012624.1 mouse_genomes_project 4 49033625 49035359 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069494.1 MGP_BALBcJ_G0029153.1 mouse_genomes_project 4 150138560 150142746 + MGP_BALBcJ_P0069494 Tnfrsf25 protein_coding protein_coding MGP_BALBcJ_T0069495.1 MGP_BALBcJ_G0029153.1 mouse_genomes_project 4 150138969 150142738 + MGP_BALBcJ_P0069495 Tnfrsf25 protein_coding protein_coding MGP_BALBcJ_T0069496.1 MGP_BALBcJ_G0029153.1 mouse_genomes_project 4 150139025 150139613 + Tnfrsf25 protein_coding processed_transcript MGP_BALBcJ_T0069497.1 MGP_BALBcJ_G0029153.1 mouse_genomes_project 4 150140597 150141950 + Tnfrsf25 protein_coding processed_transcript MGP_BALBcJ_T0007822.1 MGP_BALBcJ_G0006392.1 mouse_genomes_project 4 51452439 51452914 - Gm29067 lincRNA lincRNA MGP_BALBcJ_T0066636.1 MGP_BALBcJ_G0028508.1 mouse_genomes_project 4 103726189 103740888 + MGP_BALBcJ_P0066636 Fam151a protein_coding protein_coding MGP_BALBcJ_T0065680.1 MGP_BALBcJ_G0028261.1 mouse_genomes_project 4 46324237 46332743 - MGP_BALBcJ_P0065680 Mrpl50 protein_coding protein_coding MGP_BALBcJ_T0069032.1 MGP_BALBcJ_G0029036.1 mouse_genomes_project 4 139087701 139093604 - MGP_BALBcJ_P0069032 Slc25a34 protein_coding protein_coding MGP_BALBcJ_T0069146.1 MGP_BALBcJ_G0029084.1 mouse_genomes_project 4 142969031 143002076 - MGP_BALBcJ_P0069146 Tnfrsf1b protein_coding protein_coding MGP_BALBcJ_T0069147.1 MGP_BALBcJ_G0029084.1 mouse_genomes_project 4 142980974 143002076 - MGP_BALBcJ_P0069147 Tnfrsf1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011801.1 MGP_BALBcJ_G0009911.1 mouse_genomes_project 4 136217520 136220849 + MGP_BALBcJ_P0011801 Pla2g2a polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011802.1 MGP_BALBcJ_G0009911.1 mouse_genomes_project 4 136217523 136220852 + MGP_BALBcJ_P0011802 Pla2g2a polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011803.1 MGP_BALBcJ_G0009911.1 mouse_genomes_project 4 136217539 136219532 + Pla2g2a polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0011804.1 MGP_BALBcJ_G0009911.1 mouse_genomes_project 4 136218921 136220852 + Pla2g2a polymorphic_pseudogene retained_intron MGP_BALBcJ_T0010587.1 MGP_BALBcJ_G0008712.1 mouse_genomes_project 4 91655834 91655915 + Mir872 miRNA miRNA MGP_BALBcJ_T0065182.1 MGP_BALBcJ_G0028156.1 mouse_genomes_project 4 38873552 38874792 + MGP_BALBcJ_P0065182 protein_coding protein_coding MGP_BALBcJ_T0068710.1 MGP_BALBcJ_G0028965.1 mouse_genomes_project 4 134813539 134815700 + MGP_BALBcJ_P0068710 1700013G24Rik protein_coding protein_coding MGP_BALBcJ_T0064811.1 MGP_BALBcJ_G0028065.1 mouse_genomes_project 4 18894607 18913154 + Fbxl4 protein_coding processed_transcript MGP_BALBcJ_T0064812.1 MGP_BALBcJ_G0028065.1 mouse_genomes_project 4 18894607 18968521 + MGP_BALBcJ_P0064812 Fbxl4 protein_coding protein_coding MGP_BALBcJ_T0064813.1 MGP_BALBcJ_G0028065.1 mouse_genomes_project 4 18894624 18968494 + MGP_BALBcJ_P0064813 Fbxl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064814.1 MGP_BALBcJ_G0028065.1 mouse_genomes_project 4 18894635 18968518 + MGP_BALBcJ_P0064814 Fbxl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064815.1 MGP_BALBcJ_G0028065.1 mouse_genomes_project 4 18894680 18968505 + MGP_BALBcJ_P0064815 Fbxl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067681.1 MGP_BALBcJ_G0028737.1 mouse_genomes_project 4 122024269 122025520 - protein_coding retained_intron MGP_BALBcJ_T0067682.1 MGP_BALBcJ_G0028737.1 mouse_genomes_project 4 122024674 122025999 - MGP_BALBcJ_P0067682 protein_coding protein_coding MGP_BALBcJ_T0067683.1 MGP_BALBcJ_G0028737.1 mouse_genomes_project 4 122024674 122025920 - MGP_BALBcJ_P0067683 protein_coding protein_coding MGP_BALBcJ_T0067684.1 MGP_BALBcJ_G0028737.1 mouse_genomes_project 4 122024675 122025851 - MGP_BALBcJ_P0067684 protein_coding protein_coding MGP_BALBcJ_T0067685.1 MGP_BALBcJ_G0028737.1 mouse_genomes_project 4 122024679 122026397 - MGP_BALBcJ_P0067685 protein_coding protein_coding MGP_BALBcJ_T0067686.1 MGP_BALBcJ_G0028737.1 mouse_genomes_project 4 122024735 122025663 - MGP_BALBcJ_P0067686 protein_coding protein_coding MGP_BALBcJ_T0068897.1 MGP_BALBcJ_G0029006.1 mouse_genomes_project 4 137141341 137249182 - MGP_BALBcJ_P0068897 Pax7 protein_coding protein_coding MGP_BALBcJ_T0068898.1 MGP_BALBcJ_G0029006.1 mouse_genomes_project 4 137145004 137248353 - MGP_BALBcJ_P0068898 Pax7 protein_coding protein_coding MGP_BALBcJ_T0066500.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98686363 98778761 + MGP_BALBcJ_P0066500 Lepr protein_coding protein_coding MGP_BALBcJ_T0066501.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98686363 98780446 + MGP_BALBcJ_P0066501 Lepr protein_coding protein_coding MGP_BALBcJ_T0066502.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98686363 98757889 + MGP_BALBcJ_P0066502 Lepr protein_coding protein_coding MGP_BALBcJ_T0066503.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98686366 98702785 + MGP_BALBcJ_P0066503 Lepr protein_coding protein_coding MGP_BALBcJ_T0066504.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98733729 98746163 + Lepr protein_coding processed_transcript MGP_BALBcJ_T0066505.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98737127 98749465 + Lepr protein_coding processed_transcript MGP_BALBcJ_T0066506.1 MGP_BALBcJ_G0028476.1 mouse_genomes_project 4 98754584 98757787 + Lepr protein_coding processed_transcript MGP_BALBcJ_T0099843.1 MGP_BALBcJ_G0037879.1 mouse_genomes_project 4 80467649 80467790 - Gm25899 snRNA snRNA MGP_BALBcJ_T0014614.1 MGP_BALBcJ_G0012711.1 mouse_genomes_project 4 82117423 82117826 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014545.1 MGP_BALBcJ_G0012642.1 mouse_genomes_project 4 52183831 52184216 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066610.1 MGP_BALBcJ_G0028503.1 mouse_genomes_project 4 103582694 103609116 - MGP_BALBcJ_P0066610 Lexm protein_coding protein_coding MGP_BALBcJ_T0066611.1 MGP_BALBcJ_G0028503.1 mouse_genomes_project 4 103582694 103609119 - MGP_BALBcJ_P0066611 Lexm protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066612.1 MGP_BALBcJ_G0028503.1 mouse_genomes_project 4 103582694 103598982 - MGP_BALBcJ_P0066612 Lexm protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066613.1 MGP_BALBcJ_G0028503.1 mouse_genomes_project 4 103583095 103609116 - MGP_BALBcJ_P0066613 Lexm protein_coding protein_coding MGP_BALBcJ_T0066003.1 MGP_BALBcJ_G0028354.1 mouse_genomes_project 4 60686452 60704452 - MGP_BALBcJ_P0066003 Tnfsf15 protein_coding protein_coding MGP_BALBcJ_T0018008.1 MGP_BALBcJ_G0015482.1 mouse_genomes_project 4 40835514 40853309 + Gm12503 processed_transcript processed_transcript MGP_BALBcJ_T0066637.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103737191 103792756 - MGP_BALBcJ_P0066637 Acot11 protein_coding protein_coding MGP_BALBcJ_T0066638.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103739830 103797914 - MGP_BALBcJ_P0066638 Acot11 protein_coding protein_coding MGP_BALBcJ_T0066639.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103739986 103764216 - MGP_BALBcJ_P0066639 Acot11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066640.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103746621 103748874 - Acot11 protein_coding processed_transcript MGP_BALBcJ_T0066641.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103754538 103792753 - MGP_BALBcJ_P0066641 Acot11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066642.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103755948 103792700 - MGP_BALBcJ_P0066642 Acot11 protein_coding protein_coding MGP_BALBcJ_T0066643.1 MGP_BALBcJ_G0028509.1 mouse_genomes_project 4 103755991 103793159 - MGP_BALBcJ_P0066643 Acot11 protein_coding protein_coding MGP_BALBcJ_T0018071.1 MGP_BALBcJ_G0015520.1 mouse_genomes_project 4 138259513 138269365 + Gm13032 processed_transcript processed_transcript MGP_BALBcJ_T0014556.1 MGP_BALBcJ_G0012653.1 mouse_genomes_project 4 56367574 56367842 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014417.1 MGP_BALBcJ_G0012514.1 mouse_genomes_project 4 13522940 13523419 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069060.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139360389 139482075 - MGP_BALBcJ_P0069060 Fhad1 protein_coding protein_coding MGP_BALBcJ_T0069061.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139360806 139478645 - MGP_BALBcJ_P0069061 Fhad1 protein_coding protein_coding MGP_BALBcJ_T0069062.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139360806 139482086 - MGP_BALBcJ_P0069062 Fhad1 protein_coding unknown_likely_coding MGP_BALBcJ_T0069063.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139387055 139393335 - Fhad1 protein_coding processed_transcript MGP_BALBcJ_T0069064.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139387055 139403986 - MGP_BALBcJ_P0069064 Fhad1 protein_coding protein_coding MGP_BALBcJ_T0069065.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139399268 139423250 - Fhad1 protein_coding processed_transcript MGP_BALBcJ_T0069066.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139403679 139425368 - Fhad1 protein_coding processed_transcript MGP_BALBcJ_T0069067.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139433883 139482090 - Fhad1 protein_coding retained_intron MGP_BALBcJ_T0069068.1 MGP_BALBcJ_G0029046.1 mouse_genomes_project 4 139480785 139482047 - Fhad1 protein_coding processed_transcript MGP_BALBcJ_T0007821.1 MGP_BALBcJ_G0006391.1 mouse_genomes_project 4 50983727 50984225 - lincRNA lincRNA MGP_BALBcJ_T0004605.1 MGP_BALBcJ_G0003991.1 mouse_genomes_project 4 154107693 154109503 - Gm16008 antisense antisense MGP_BALBcJ_T0004606.1 MGP_BALBcJ_G0003991.1 mouse_genomes_project 4 154109405 154117137 - Gm16008 antisense antisense MGP_BALBcJ_T0004607.1 MGP_BALBcJ_G0003991.1 mouse_genomes_project 4 154111742 154117116 - Gm16008 antisense antisense MGP_BALBcJ_T0066081.1 MGP_BALBcJ_G0028374.1 mouse_genomes_project 4 76984820 76985297 + MGP_BALBcJ_P0066081 protein_coding protein_coding MGP_BALBcJ_T0014486.1 MGP_BALBcJ_G0012583.1 mouse_genomes_project 4 32118002 32118570 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014599.1 MGP_BALBcJ_G0012696.1 mouse_genomes_project 4 75609814 75611091 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004414.1 MGP_BALBcJ_G0003847.1 mouse_genomes_project 4 21324372 21331990 + Gm11899 antisense antisense MGP_BALBcJ_T0001419.1 MGP_BALBcJ_G0001341.1 mouse_genomes_project 4 129265149 129269886 - TEC TEC MGP_BALBcJ_T0010600.1 MGP_BALBcJ_G0008725.1 mouse_genomes_project 4 117859192 117859284 - Mir30e miRNA miRNA MGP_BALBcJ_T0066216.1 MGP_BALBcJ_G0028396.1 mouse_genomes_project 4 83840702 83845040 - MGP_BALBcJ_P0066216 Rps6 protein_coding protein_coding MGP_BALBcJ_T0066217.1 MGP_BALBcJ_G0028396.1 mouse_genomes_project 4 83842501 83844973 - Rps6 protein_coding processed_transcript MGP_BALBcJ_T0066218.1 MGP_BALBcJ_G0028396.1 mouse_genomes_project 4 83843378 83844982 - Rps6 protein_coding processed_transcript MGP_BALBcJ_T0066219.1 MGP_BALBcJ_G0028396.1 mouse_genomes_project 4 83843489 83844960 - Rps6 protein_coding processed_transcript MGP_BALBcJ_T0067993.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126829848 126840260 - MGP_BALBcJ_P0067993 Lck protein_coding protein_coding MGP_BALBcJ_T0067994.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126829853 126858493 - MGP_BALBcJ_P0067994 Lck protein_coding protein_coding MGP_BALBcJ_T0067995.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126829853 126840279 - MGP_BALBcJ_P0067995 Lck protein_coding protein_coding MGP_BALBcJ_T0067996.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126830399 126837745 - Lck protein_coding retained_intron MGP_BALBcJ_T0067997.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126833538 126838128 - Lck protein_coding retained_intron MGP_BALBcJ_T0067998.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126837372 126838358 - Lck protein_coding retained_intron MGP_BALBcJ_T0067999.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126838750 126839975 - Lck protein_coding retained_intron MGP_BALBcJ_T0068000.1 MGP_BALBcJ_G0028810.1 mouse_genomes_project 4 126839252 126840260 - MGP_BALBcJ_P0068000 Lck protein_coding protein_coding MGP_BALBcJ_T0067160.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113625141 113652426 - MGP_BALBcJ_P0067160 Nasp protein_coding protein_coding MGP_BALBcJ_T0067161.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113625698 113652870 - MGP_BALBcJ_P0067161 Nasp protein_coding protein_coding MGP_BALBcJ_T0067162.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113625698 113652407 - MGP_BALBcJ_P0067162 Nasp protein_coding protein_coding MGP_BALBcJ_T0067163.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113626815 113630338 - Nasp protein_coding processed_transcript MGP_BALBcJ_T0067164.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113626881 113629015 - Nasp protein_coding processed_transcript MGP_BALBcJ_T0067165.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113635556 113652422 - Nasp protein_coding processed_transcript MGP_BALBcJ_T0067166.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113641193 113648265 - Nasp protein_coding processed_transcript MGP_BALBcJ_T0067167.1 MGP_BALBcJ_G0028611.1 mouse_genomes_project 4 113642795 113652377 - Nasp protein_coding processed_transcript MGP_BALBcJ_T0010582.1 MGP_BALBcJ_G0008707.1 mouse_genomes_project 4 73877750 73877827 - Gm23159 miRNA miRNA MGP_BALBcJ_T0014441.1 MGP_BALBcJ_G0012538.1 mouse_genomes_project 4 21813063 21813757 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101172.1 MGP_BALBcJ_G0039208.1 mouse_genomes_project 4 129475289 129475426 + Snora16a snoRNA snoRNA MGP_BALBcJ_T0067975.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126731885 126762308 + MGP_BALBcJ_P0067975 Bsdc1 protein_coding protein_coding MGP_BALBcJ_T0067976.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126731976 126737293 + Bsdc1 protein_coding processed_transcript MGP_BALBcJ_T0067977.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126731988 126740477 + Bsdc1 protein_coding retained_intron MGP_BALBcJ_T0067978.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126731988 126737281 + Bsdc1 protein_coding processed_transcript MGP_BALBcJ_T0067979.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126731991 126736266 + Bsdc1 protein_coding retained_intron MGP_BALBcJ_T0067980.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126732140 126737293 + MGP_BALBcJ_P0067980 Bsdc1 protein_coding protein_coding MGP_BALBcJ_T0067981.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126734846 126735845 + Bsdc1 protein_coding processed_transcript MGP_BALBcJ_T0067982.1 MGP_BALBcJ_G0028805.1 mouse_genomes_project 4 126742171 126744211 + Bsdc1 protein_coding retained_intron MGP_BALBcJ_T0067361.1 MGP_BALBcJ_G0028647.1 mouse_genomes_project 4 115422066 115472470 - MGP_BALBcJ_P0067361 Szt2 protein_coding protein_coding MGP_BALBcJ_T0067362.1 MGP_BALBcJ_G0028647.1 mouse_genomes_project 4 115422070 115433352 - MGP_BALBcJ_P0067362 Szt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067363.1 MGP_BALBcJ_G0028647.1 mouse_genomes_project 4 115422732 115424374 - Szt2 protein_coding processed_transcript MGP_BALBcJ_T0067364.1 MGP_BALBcJ_G0028647.1 mouse_genomes_project 4 115428041 115428921 - Szt2 protein_coding retained_intron MGP_BALBcJ_T0067365.1 MGP_BALBcJ_G0028647.1 mouse_genomes_project 4 115431750 115432903 - Szt2 protein_coding retained_intron MGP_BALBcJ_T0067366.1 MGP_BALBcJ_G0028647.1 mouse_genomes_project 4 115448410 115449214 - Szt2 protein_coding processed_transcript MGP_BALBcJ_T0014543.1 MGP_BALBcJ_G0012640.1 mouse_genomes_project 4 52049644 52050104 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014722.1 MGP_BALBcJ_G0012819.1 mouse_genomes_project 4 117989265 117989703 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065608.1 MGP_BALBcJ_G0028241.1 mouse_genomes_project 4 43371760 43417749 - MGP_BALBcJ_P0065608 Tbc1d2 protein_coding protein_coding MGP_BALBcJ_T0065609.1 MGP_BALBcJ_G0028241.1 mouse_genomes_project 4 43400814 43417749 - MGP_BALBcJ_P0065609 Tbc1d2 protein_coding protein_coding MGP_BALBcJ_T0001425.1 MGP_BALBcJ_G0001346.1 mouse_genomes_project 4 140281988 140282207 + TEC TEC MGP_BALBcJ_T0014609.1 MGP_BALBcJ_G0012706.1 mouse_genomes_project 4 80536476 80536939 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068794.1 MGP_BALBcJ_G0028976.1 mouse_genomes_project 4 135677528 135685324 + MGP_BALBcJ_P0068794 Ddost protein_coding protein_coding MGP_BALBcJ_T0069580.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152026891 152031580 + MGP_BALBcJ_P0069580 A430005L14Rik protein_coding protein_coding MGP_BALBcJ_T0069581.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152026891 152031573 + MGP_BALBcJ_P0069581 A430005L14Rik protein_coding protein_coding MGP_BALBcJ_T0069582.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152026909 152029721 + A430005L14Rik protein_coding retained_intron MGP_BALBcJ_T0069583.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152026920 152031458 + MGP_BALBcJ_P0069583 A430005L14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069584.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152026920 152031166 + MGP_BALBcJ_P0069584 A430005L14Rik protein_coding protein_coding MGP_BALBcJ_T0069585.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152026983 152030389 + A430005L14Rik protein_coding processed_transcript MGP_BALBcJ_T0069586.1 MGP_BALBcJ_G0029166.1 mouse_genomes_project 4 152029446 152030744 + A430005L14Rik protein_coding retained_intron MGP_BALBcJ_T0065823.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097745 55192203 + MGP_BALBcJ_P0065823 Musk protein_coding protein_coding MGP_BALBcJ_T0065824.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097747 55192203 + MGP_BALBcJ_P0065824 Musk protein_coding protein_coding MGP_BALBcJ_T0065825.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097747 55192204 + MGP_BALBcJ_P0065825 Musk protein_coding protein_coding MGP_BALBcJ_T0065826.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097747 55192204 + MGP_BALBcJ_P0065826 Musk protein_coding protein_coding MGP_BALBcJ_T0065827.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097747 55192203 + MGP_BALBcJ_P0065827 Musk protein_coding protein_coding MGP_BALBcJ_T0065828.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097747 55192204 + MGP_BALBcJ_P0065828 Musk protein_coding protein_coding MGP_BALBcJ_T0065829.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097747 55192203 + MGP_BALBcJ_P0065829 Musk protein_coding protein_coding MGP_BALBcJ_T0065830.1 MGP_BALBcJ_G0028304.1 mouse_genomes_project 4 55097957 55120123 + Musk protein_coding processed_transcript MGP_BALBcJ_T0004445.1 MGP_BALBcJ_G0003873.1 mouse_genomes_project 4 59562082 59568109 - Gm11209 antisense antisense MGP_BALBcJ_T0101105.1 MGP_BALBcJ_G0039141.1 mouse_genomes_project 4 18933001 18933134 + Gm24607 snoRNA snoRNA MGP_BALBcJ_T0065912.1 MGP_BALBcJ_G0028331.1 mouse_genomes_project 4 59319384 59343629 - MGP_BALBcJ_P0065912 Cdc26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065914.1 MGP_BALBcJ_G0028331.1 mouse_genomes_project 4 59329322 59343629 - MGP_BALBcJ_P0065914 Cdc26 protein_coding protein_coding MGP_BALBcJ_T0065915.1 MGP_BALBcJ_G0028331.1 mouse_genomes_project 4 59329373 59343612 - MGP_BALBcJ_P0065915 Cdc26 protein_coding protein_coding MGP_BALBcJ_T0065916.1 MGP_BALBcJ_G0028331.1 mouse_genomes_project 4 59338595 59342903 - Cdc26 protein_coding retained_intron MGP_BALBcJ_T0014453.1 MGP_BALBcJ_G0012550.1 mouse_genomes_project 4 24112889 24113326 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014442.1 MGP_BALBcJ_G0012539.1 mouse_genomes_project 4 21866833 21867661 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067676.1 MGP_BALBcJ_G0028736.1 mouse_genomes_project 4 121973817 122024569 + MGP_BALBcJ_P0067676 Mtf1 protein_coding protein_coding MGP_BALBcJ_T0067677.1 MGP_BALBcJ_G0028736.1 mouse_genomes_project 4 121974262 122024990 + MGP_BALBcJ_P0067677 Mtf1 protein_coding protein_coding MGP_BALBcJ_T0067678.1 MGP_BALBcJ_G0028736.1 mouse_genomes_project 4 121974262 121991698 + MGP_BALBcJ_P0067678 Mtf1 protein_coding protein_coding MGP_BALBcJ_T0067679.1 MGP_BALBcJ_G0028736.1 mouse_genomes_project 4 121974295 121977074 + Mtf1 protein_coding retained_intron MGP_BALBcJ_T0067680.1 MGP_BALBcJ_G0028736.1 mouse_genomes_project 4 121974391 121976436 + MGP_BALBcJ_P0067680 Mtf1 protein_coding protein_coding MGP_BALBcJ_T0014413.1 MGP_BALBcJ_G0012510.1 mouse_genomes_project 4 12866990 12868210 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007854.1 MGP_BALBcJ_G0006419.1 mouse_genomes_project 4 80318611 80332192 + lincRNA lincRNA MGP_BALBcJ_T0068600.1 MGP_BALBcJ_G0028935.1 mouse_genomes_project 4 133184137 133208766 + MGP_BALBcJ_P0068600 Cnr2 protein_coding protein_coding MGP_BALBcJ_T0068601.1 MGP_BALBcJ_G0028935.1 mouse_genomes_project 4 133200531 133208766 + MGP_BALBcJ_P0068601 Cnr2 protein_coding protein_coding MGP_BALBcJ_T0018037.1 MGP_BALBcJ_G0015504.1 mouse_genomes_project 4 105610674 105639081 - Gm12743 processed_transcript processed_transcript MGP_BALBcJ_T0010588.1 MGP_BALBcJ_G0008713.1 mouse_genomes_project 4 95541450 95541895 - miRNA miRNA MGP_BALBcJ_T0011543.1 MGP_BALBcJ_G0009668.1 mouse_genomes_project 4 44374500 44374627 + Gm27601 misc_RNA misc_RNA MGP_BALBcJ_T0004473.1 MGP_BALBcJ_G0003891.1 mouse_genomes_project 4 99999415 100007268 - BB031773 antisense antisense MGP_BALBcJ_T0101164.1 MGP_BALBcJ_G0039200.1 mouse_genomes_project 4 120437816 120437947 + Gm22154 snoRNA snoRNA MGP_BALBcJ_T0067599.1 MGP_BALBcJ_G0028715.1 mouse_genomes_project 4 120258701 120260463 + MGP_BALBcJ_P0067599 protein_coding protein_coding MGP_BALBcJ_T0067289.1 MGP_BALBcJ_G0028634.1 mouse_genomes_project 4 114721075 114728647 - Dmap1 protein_coding processed_transcript MGP_BALBcJ_T0067290.1 MGP_BALBcJ_G0028634.1 mouse_genomes_project 4 114721075 114728667 - MGP_BALBcJ_P0067290 Dmap1 protein_coding protein_coding MGP_BALBcJ_T0067291.1 MGP_BALBcJ_G0028634.1 mouse_genomes_project 4 114721080 114728377 - Dmap1 protein_coding processed_transcript MGP_BALBcJ_T0067292.1 MGP_BALBcJ_G0028634.1 mouse_genomes_project 4 114727313 114728615 - Dmap1 protein_coding processed_transcript MGP_BALBcJ_T0067293.1 MGP_BALBcJ_G0028634.1 mouse_genomes_project 4 114727695 114728605 - Dmap1 protein_coding processed_transcript MGP_BALBcJ_T0067294.1 MGP_BALBcJ_G0028634.1 mouse_genomes_project 4 114727980 114728665 - Dmap1 protein_coding processed_transcript MGP_BALBcJ_T0064982.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 32389725 32530471 - MGP_BALBcJ_P0064982 Lingo2 protein_coding protein_coding MGP_BALBcJ_T0064983.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 32390484 33685293 - MGP_BALBcJ_P0064983 Lingo2 protein_coding protein_coding MGP_BALBcJ_T0064984.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 32390484 32827161 - MGP_BALBcJ_P0064984 Lingo2 protein_coding protein_coding MGP_BALBcJ_T0064985.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 32390484 32530471 - MGP_BALBcJ_P0064985 Lingo2 protein_coding protein_coding MGP_BALBcJ_T0064986.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 32390921 32739923 - MGP_BALBcJ_P0064986 Lingo2 protein_coding protein_coding MGP_BALBcJ_T0064987.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 32739920 33684555 - Lingo2 protein_coding processed_transcript MGP_BALBcJ_T0064988.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 33443879 33685814 - Lingo2 protein_coding processed_transcript MGP_BALBcJ_T0064989.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 33446616 33684536 - Lingo2 protein_coding processed_transcript MGP_BALBcJ_T0064990.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 33446861 33684558 - Lingo2 protein_coding processed_transcript MGP_BALBcJ_T0064991.1 MGP_BALBcJ_G0028108.1 mouse_genomes_project 4 33685169 33685817 - Lingo2 protein_coding processed_transcript MGP_BALBcJ_T0014566.1 MGP_BALBcJ_G0012663.1 mouse_genomes_project 4 64466257 64466884 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065911.1 MGP_BALBcJ_G0028330.1 mouse_genomes_project 4 59295588 59328081 + MGP_BALBcJ_P0065911 Slc31a1 protein_coding protein_coding MGP_BALBcJ_T0065913.1 MGP_BALBcJ_G0028330.1 mouse_genomes_project 4 59321231 59328081 + MGP_BALBcJ_P0065913 Slc31a1 protein_coding protein_coding MGP_BALBcJ_T0068331.1 MGP_BALBcJ_G0028872.1 mouse_genomes_project 4 130443696 130453752 - MGP_BALBcJ_P0068331 Sytl1 protein_coding protein_coding MGP_BALBcJ_T0068332.1 MGP_BALBcJ_G0028872.1 mouse_genomes_project 4 130443696 130453726 - MGP_BALBcJ_P0068332 Sytl1 protein_coding protein_coding MGP_BALBcJ_T0068333.1 MGP_BALBcJ_G0028872.1 mouse_genomes_project 4 130443704 130453726 - Sytl1 protein_coding processed_transcript MGP_BALBcJ_T0068334.1 MGP_BALBcJ_G0028872.1 mouse_genomes_project 4 130443767 130453691 - Sytl1 protein_coding processed_transcript MGP_BALBcJ_T0007891.1 MGP_BALBcJ_G0006450.1 mouse_genomes_project 4 103489993 103497513 - Tmem61 lincRNA lincRNA MGP_BALBcJ_T0007892.1 MGP_BALBcJ_G0006450.1 mouse_genomes_project 4 103490225 103494284 - Tmem61 lincRNA lincRNA MGP_BALBcJ_T0007976.1 MGP_BALBcJ_G0006505.1 mouse_genomes_project 4 134485689 134491692 - Gm13003 lincRNA lincRNA MGP_BALBcJ_T0067871.1 MGP_BALBcJ_G0028784.1 mouse_genomes_project 4 125505275 125506021 - MGP_BALBcJ_P0067871 Hmgb4 protein_coding protein_coding MGP_BALBcJ_T0007907.1 MGP_BALBcJ_G0006461.1 mouse_genomes_project 4 114541251 114545407 + Gm12827 lincRNA lincRNA MGP_BALBcJ_T0101131.1 MGP_BALBcJ_G0039167.1 mouse_genomes_project 4 53710397 53710523 + Gm22300 snoRNA snoRNA MGP_BALBcJ_T0065592.1 MGP_BALBcJ_G0028238.1 mouse_genomes_project 4 43266303 43280686 + MGP_BALBcJ_P0065592 Nans protein_coding protein_coding MGP_BALBcJ_T0065593.1 MGP_BALBcJ_G0028238.1 mouse_genomes_project 4 43266374 43272192 + Nans protein_coding processed_transcript MGP_BALBcJ_T0065594.1 MGP_BALBcJ_G0028238.1 mouse_genomes_project 4 43266429 43276138 + Nans protein_coding processed_transcript MGP_BALBcJ_T0065595.1 MGP_BALBcJ_G0028238.1 mouse_genomes_project 4 43267040 43277801 + Nans protein_coding processed_transcript MGP_BALBcJ_T0010553.1 MGP_BALBcJ_G0008678.1 mouse_genomes_project 4 7282711 7282842 - Mir3471-1 miRNA miRNA MGP_BALBcJ_T0018023.1 MGP_BALBcJ_G0015493.1 mouse_genomes_project 4 86144853 86171894 - Gm12602 processed_transcript processed_transcript MGP_BALBcJ_T0018024.1 MGP_BALBcJ_G0015493.1 mouse_genomes_project 4 86167601 86171849 - Gm12602 processed_transcript processed_transcript MGP_BALBcJ_T0064755.1 MGP_BALBcJ_G0028051.1 mouse_genomes_project 4 16139576 16184992 + MGP_BALBcJ_P0064755 Gm12353 protein_coding protein_coding MGP_BALBcJ_T0064731.1 MGP_BALBcJ_G0028042.1 mouse_genomes_project 4 12407644 12435833 - MGP_BALBcJ_P0064731 Decr1 protein_coding protein_coding MGP_BALBcJ_T0064732.1 MGP_BALBcJ_G0028042.1 mouse_genomes_project 4 12423307 12435601 - Decr1 protein_coding processed_transcript MGP_BALBcJ_T0064733.1 MGP_BALBcJ_G0028042.1 mouse_genomes_project 4 12434016 12434815 - Decr1 protein_coding processed_transcript MGP_BALBcJ_T0101138.1 MGP_BALBcJ_G0039174.1 mouse_genomes_project 4 70533839 70533972 - Gm24170 snoRNA snoRNA MGP_BALBcJ_T0066224.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 83980815 84239818 - MGP_BALBcJ_P0066224 Slc24a2 protein_coding protein_coding MGP_BALBcJ_T0066225.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 83980820 84237308 - MGP_BALBcJ_P0066225 Slc24a2 protein_coding protein_coding MGP_BALBcJ_T0066226.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 83988891 84237218 - MGP_BALBcJ_P0066226 Slc24a2 protein_coding protein_coding MGP_BALBcJ_T0066227.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 83988891 84237222 - MGP_BALBcJ_P0066227 Slc24a2 protein_coding protein_coding MGP_BALBcJ_T0066228.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 83993881 84009763 - Slc24a2 protein_coding processed_transcript MGP_BALBcJ_T0066229.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 84027122 84174568 - MGP_BALBcJ_P0066229 Slc24a2 protein_coding protein_coding MGP_BALBcJ_T0066230.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 84071545 84239764 - Slc24a2 protein_coding processed_transcript MGP_BALBcJ_T0066231.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 84071933 84239763 - Slc24a2 protein_coding processed_transcript MGP_BALBcJ_T0066232.1 MGP_BALBcJ_G0028398.1 mouse_genomes_project 4 84174067 84239808 - Slc24a2 protein_coding processed_transcript MGP_BALBcJ_T0065110.1 MGP_BALBcJ_G0028140.1 mouse_genomes_project 4 38513582 38521971 - MGP_BALBcJ_P0065110 Dctn3 protein_coding protein_coding MGP_BALBcJ_T0065111.1 MGP_BALBcJ_G0028140.1 mouse_genomes_project 4 38513582 38521964 - MGP_BALBcJ_P0065111 Dctn3 protein_coding protein_coding MGP_BALBcJ_T0065112.1 MGP_BALBcJ_G0028140.1 mouse_genomes_project 4 38518555 38521938 - Dctn3 protein_coding processed_transcript MGP_BALBcJ_T0065618.1 MGP_BALBcJ_G0028244.1 mouse_genomes_project 4 43869854 43897743 + MGP_BALBcJ_P0065618 Galnt12 protein_coding protein_coding MGP_BALBcJ_T0066176.1 MGP_BALBcJ_G0028388.1 mouse_genomes_project 4 81829857 82073172 + MGP_BALBcJ_P0066176 Cntln protein_coding protein_coding MGP_BALBcJ_T0066177.1 MGP_BALBcJ_G0028388.1 mouse_genomes_project 4 81829952 81896268 + MGP_BALBcJ_P0066177 Cntln protein_coding protein_coding MGP_BALBcJ_T0066178.1 MGP_BALBcJ_G0028388.1 mouse_genomes_project 4 81830013 82073168 + MGP_BALBcJ_P0066178 Cntln protein_coding protein_coding MGP_BALBcJ_T0066179.1 MGP_BALBcJ_G0028388.1 mouse_genomes_project 4 82039372 82073169 + MGP_BALBcJ_P0066179 Cntln protein_coding protein_coding MGP_BALBcJ_T0014804.1 MGP_BALBcJ_G0012901.1 mouse_genomes_project 4 146505346 146506167 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014620.1 MGP_BALBcJ_G0012717.1 mouse_genomes_project 4 85155243 85155518 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068241.1 MGP_BALBcJ_G0028852.1 mouse_genomes_project 4 129524466 129591549 - MGP_BALBcJ_P0068241 Phactr4 protein_coding protein_coding MGP_BALBcJ_T0068242.1 MGP_BALBcJ_G0028852.1 mouse_genomes_project 4 129524473 129591506 - MGP_BALBcJ_P0068242 Phactr4 protein_coding protein_coding MGP_BALBcJ_T0068243.1 MGP_BALBcJ_G0028852.1 mouse_genomes_project 4 129526805 129567354 - MGP_BALBcJ_P0068243 Phactr4 protein_coding protein_coding MGP_BALBcJ_T0068244.1 MGP_BALBcJ_G0028852.1 mouse_genomes_project 4 129529269 129539507 - Phactr4 protein_coding processed_transcript MGP_BALBcJ_T0068245.1 MGP_BALBcJ_G0028852.1 mouse_genomes_project 4 129539926 129591501 - MGP_BALBcJ_P0068245 Phactr4 protein_coding protein_coding MGP_BALBcJ_T0068246.1 MGP_BALBcJ_G0028852.1 mouse_genomes_project 4 129546186 129567342 - MGP_BALBcJ_P0068246 Phactr4 protein_coding protein_coding MGP_BALBcJ_T0014699.1 MGP_BALBcJ_G0012796.1 mouse_genomes_project 4 112465230 112465707 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068732.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135031350 135090174 + Rap1gap protein_coding processed_transcript MGP_BALBcJ_T0068733.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135031378 135085490 + Rap1gap protein_coding retained_intron MGP_BALBcJ_T0068734.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135051272 135091550 + MGP_BALBcJ_P0068734 Rap1gap protein_coding protein_coding MGP_BALBcJ_T0068735.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135051272 135103502 + MGP_BALBcJ_P0068735 Rap1gap protein_coding protein_coding MGP_BALBcJ_T0068736.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135051272 135089394 + MGP_BALBcJ_P0068736 Rap1gap protein_coding protein_coding MGP_BALBcJ_T0068737.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135052494 135103501 + MGP_BALBcJ_P0068737 Rap1gap protein_coding protein_coding MGP_BALBcJ_T0068738.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135058245 135089425 + Rap1gap protein_coding processed_transcript MGP_BALBcJ_T0068739.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135081266 135103502 + MGP_BALBcJ_P0068739 Rap1gap protein_coding protein_coding MGP_BALBcJ_T0068740.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135092465 135101999 + MGP_BALBcJ_P0068740 Rap1gap protein_coding protein_coding MGP_BALBcJ_T0068741.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135097587 135103502 + Rap1gap protein_coding retained_intron MGP_BALBcJ_T0068742.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135098925 135100652 + Rap1gap protein_coding retained_intron MGP_BALBcJ_T0068743.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135101356 135102577 + Rap1gap protein_coding retained_intron MGP_BALBcJ_T0068744.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135101821 135102460 + Rap1gap protein_coding retained_intron MGP_BALBcJ_T0068745.1 MGP_BALBcJ_G0028969.1 mouse_genomes_project 4 135101851 135103343 + Rap1gap protein_coding retained_intron MGP_BALBcJ_T0068864.1 MGP_BALBcJ_G0028998.1 mouse_genomes_project 4 136702973 136710916 + MGP_BALBcJ_P0068864 Akr7a5 protein_coding protein_coding MGP_BALBcJ_T0068865.1 MGP_BALBcJ_G0028998.1 mouse_genomes_project 4 136709069 136709898 + Akr7a5 protein_coding processed_transcript MGP_BALBcJ_T0098946.1 MGP_BALBcJ_G0036993.1 mouse_genomes_project 4 105531813 105534862 + Gm12737 sense_intronic sense_intronic MGP_BALBcJ_T0010556.1 MGP_BALBcJ_G0008681.1 mouse_genomes_project 4 8416997 8417097 + Gm25002 miRNA miRNA MGP_BALBcJ_T0014528.1 MGP_BALBcJ_G0012625.1 mouse_genomes_project 4 49151239 49152628 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004477.1 MGP_BALBcJ_G0003895.1 mouse_genomes_project 4 104125609 104135936 + Gm12802 antisense antisense MGP_BALBcJ_T0007904.1 MGP_BALBcJ_G0006458.1 mouse_genomes_project 4 111660547 111667315 + Gm12829 lincRNA lincRNA MGP_BALBcJ_T0014634.1 MGP_BALBcJ_G0012731.1 mouse_genomes_project 4 90130561 90133488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011796.1 MGP_BALBcJ_G0009910.1 mouse_genomes_project 4 115419299 115422068 + MGP_BALBcJ_P0011796 Hyi polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011797.1 MGP_BALBcJ_G0009910.1 mouse_genomes_project 4 115419308 115420628 + Hyi polymorphic_pseudogene retained_intron MGP_BALBcJ_T0011798.1 MGP_BALBcJ_G0009910.1 mouse_genomes_project 4 115419308 115422068 + MGP_BALBcJ_P0011798 Hyi polymorphic_pseudogene nonsense_mediated_decay MGP_BALBcJ_T0011799.1 MGP_BALBcJ_G0009910.1 mouse_genomes_project 4 115419323 115422068 + MGP_BALBcJ_P0011799 Hyi polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011800.1 MGP_BALBcJ_G0009910.1 mouse_genomes_project 4 115420645 115421819 + Hyi polymorphic_pseudogene retained_intron MGP_BALBcJ_T0067360.1 MGP_BALBcJ_G0009910.1 mouse_genomes_project 4 115419342 115421981 + MGP_BALBcJ_P0067360 Hyi polymorphic_pseudogene unknown_likely_coding MGP_BALBcJ_T0004424.1 MGP_BALBcJ_G0003855.1 mouse_genomes_project 4 38422970 38423863 + Gm12405 antisense antisense MGP_BALBcJ_T0007835.1 MGP_BALBcJ_G0006402.1 mouse_genomes_project 4 54999201 55027250 + Gm26889 lincRNA lincRNA MGP_BALBcJ_T0014637.1 MGP_BALBcJ_G0012734.1 mouse_genomes_project 4 90807800 90808058 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066252.1 MGP_BALBcJ_G0028402.1 mouse_genomes_project 4 85521981 85522731 - MGP_BALBcJ_P0066252 Ifnb1 protein_coding protein_coding MGP_BALBcJ_T0068335.1 MGP_BALBcJ_G0028873.1 mouse_genomes_project 4 130456641 130468598 - MGP_BALBcJ_P0068335 Tmem222 protein_coding protein_coding MGP_BALBcJ_T0068336.1 MGP_BALBcJ_G0028873.1 mouse_genomes_project 4 130457426 130468468 - MGP_BALBcJ_P0068336 Tmem222 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068337.1 MGP_BALBcJ_G0028873.1 mouse_genomes_project 4 130457472 130468576 - MGP_BALBcJ_P0068337 Tmem222 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068338.1 MGP_BALBcJ_G0028873.1 mouse_genomes_project 4 130457483 130468424 - MGP_BALBcJ_P0068338 Tmem222 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068339.1 MGP_BALBcJ_G0028873.1 mouse_genomes_project 4 130457498 130460703 - Tmem222 protein_coding retained_intron MGP_BALBcJ_T0068340.1 MGP_BALBcJ_G0028873.1 mouse_genomes_project 4 130461478 130468557 - Tmem222 protein_coding retained_intron MGP_BALBcJ_T0068368.1 MGP_BALBcJ_G0028884.1 mouse_genomes_project 4 130821497 130854790 - MGP_BALBcJ_P0068368 Zdhhc18 protein_coding protein_coding MGP_BALBcJ_T0068369.1 MGP_BALBcJ_G0028884.1 mouse_genomes_project 4 130824863 130831772 - Zdhhc18 protein_coding retained_intron MGP_BALBcJ_T0068370.1 MGP_BALBcJ_G0028884.1 mouse_genomes_project 4 130824933 130829238 - Zdhhc18 protein_coding processed_transcript MGP_BALBcJ_T0068371.1 MGP_BALBcJ_G0028884.1 mouse_genomes_project 4 130829519 130831547 - Zdhhc18 protein_coding retained_intron MGP_BALBcJ_T0068372.1 MGP_BALBcJ_G0028884.1 mouse_genomes_project 4 130848558 130872776 - Zdhhc18 protein_coding processed_transcript MGP_BALBcJ_T0068945.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138465960 138478499 - Crocc protein_coding retained_intron MGP_BALBcJ_T0068946.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138465960 138471448 - Crocc protein_coding retained_intron MGP_BALBcJ_T0068947.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138465960 138510245 - MGP_BALBcJ_P0068947 Crocc protein_coding protein_coding MGP_BALBcJ_T0068948.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138465960 138503416 - MGP_BALBcJ_P0068948 Crocc protein_coding protein_coding MGP_BALBcJ_T0068949.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138465963 138503355 - MGP_BALBcJ_P0068949 Crocc protein_coding protein_coding MGP_BALBcJ_T0068950.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138465963 138507893 - MGP_BALBcJ_P0068950 Crocc protein_coding protein_coding MGP_BALBcJ_T0068951.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138466302 138468124 - Crocc protein_coding retained_intron MGP_BALBcJ_T0068952.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138469048 138471840 - Crocc protein_coding retained_intron MGP_BALBcJ_T0068953.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138470861 138471870 - Crocc protein_coding retained_intron MGP_BALBcJ_T0068954.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138493883 138510240 - MGP_BALBcJ_P0068954 Crocc protein_coding protein_coding MGP_BALBcJ_T0068955.1 MGP_BALBcJ_G0029019.1 mouse_genomes_project 4 138495118 138507803 - Crocc protein_coding retained_intron MGP_BALBcJ_T0068302.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201056 130255083 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0068303.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201302 130272318 + MGP_BALBcJ_P0068303 Ahdc1 protein_coding protein_coding MGP_BALBcJ_T0068304.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201302 130272565 + MGP_BALBcJ_P0068304 Ahdc1 protein_coding protein_coding MGP_BALBcJ_T0068305.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201339 130255374 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0068306.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201361 130249555 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0068307.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201634 130272106 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0068308.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201846 130255085 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0068309.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130201888 130256039 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0068310.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130202000 130272107 + MGP_BALBcJ_P0068310 Ahdc1 protein_coding protein_coding MGP_BALBcJ_T0068311.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130233950 130271703 + MGP_BALBcJ_P0068311 Ahdc1 protein_coding protein_coding MGP_BALBcJ_T0068312.1 MGP_BALBcJ_G0028867.1 mouse_genomes_project 4 130260514 130266516 + Ahdc1 protein_coding processed_transcript MGP_BALBcJ_T0014465.1 MGP_BALBcJ_G0012562.1 mouse_genomes_project 4 26855301 26855836 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065201.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39641628 39662789 + Phf24 protein_coding processed_transcript MGP_BALBcJ_T0065202.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39641649 39658720 + MGP_BALBcJ_P0065202 Phf24 protein_coding protein_coding MGP_BALBcJ_T0065203.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39641662 39669641 + MGP_BALBcJ_P0065203 Phf24 protein_coding protein_coding MGP_BALBcJ_T0065204.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39642219 39669641 + MGP_BALBcJ_P0065204 Phf24 protein_coding protein_coding MGP_BALBcJ_T0065205.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39642238 39669641 + MGP_BALBcJ_P0065205 Phf24 protein_coding protein_coding MGP_BALBcJ_T0065206.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39642302 39665246 + MGP_BALBcJ_P0065206 Phf24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065207.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39647214 39658686 + MGP_BALBcJ_P0065207 Phf24 protein_coding protein_coding MGP_BALBcJ_T0065208.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39658807 39664402 + MGP_BALBcJ_P0065208 Phf24 protein_coding protein_coding MGP_BALBcJ_T0065209.1 MGP_BALBcJ_G0028169.1 mouse_genomes_project 4 39663142 39664722 + MGP_BALBcJ_P0065209 Phf24 protein_coding protein_coding MGP_BALBcJ_T0007866.1 MGP_BALBcJ_G0006429.1 mouse_genomes_project 4 88977429 88978528 - 4930577H14Rik lincRNA lincRNA MGP_BALBcJ_T0067966.1 MGP_BALBcJ_G0028802.1 mouse_genomes_project 4 126601674 126621004 + MGP_BALBcJ_P0067966 Zbtb8os protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067967.1 MGP_BALBcJ_G0028802.1 mouse_genomes_project 4 126601986 126613045 + MGP_BALBcJ_P0067967 Zbtb8os protein_coding protein_coding MGP_BALBcJ_T0067968.1 MGP_BALBcJ_G0028802.1 mouse_genomes_project 4 126602026 126613188 + MGP_BALBcJ_P0067968 Zbtb8os protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067969.1 MGP_BALBcJ_G0028802.1 mouse_genomes_project 4 126610182 126613085 + Zbtb8os protein_coding retained_intron MGP_BALBcJ_T0068181.1 MGP_BALBcJ_G0028841.1 mouse_genomes_project 4 129033019 129060809 + MGP_BALBcJ_P0068181 Srsf4 protein_coding protein_coding MGP_BALBcJ_T0068182.1 MGP_BALBcJ_G0028841.1 mouse_genomes_project 4 129033218 129051547 + MGP_BALBcJ_P0068182 Srsf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068183.1 MGP_BALBcJ_G0028841.1 mouse_genomes_project 4 129043697 129056371 + MGP_BALBcJ_P0068183 Srsf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068184.1 MGP_BALBcJ_G0028841.1 mouse_genomes_project 4 129044610 129060809 + Srsf4 protein_coding retained_intron MGP_BALBcJ_T0068185.1 MGP_BALBcJ_G0028841.1 mouse_genomes_project 4 129045585 129060810 + MGP_BALBcJ_P0068185 Srsf4 protein_coding unknown_likely_coding MGP_BALBcJ_T0099856.1 MGP_BALBcJ_G0037892.1 mouse_genomes_project 4 105053262 105053366 - Gm23354 snRNA snRNA MGP_BALBcJ_T0101115.1 MGP_BALBcJ_G0039151.1 mouse_genomes_project 4 37992419 37992497 - Gm23090 snoRNA snoRNA MGP_BALBcJ_T0007828.1 MGP_BALBcJ_G0006397.1 mouse_genomes_project 4 52410356 52443245 + Gm12506 lincRNA lincRNA MGP_BALBcJ_T0010608.1 MGP_BALBcJ_G0008733.1 mouse_genomes_project 4 126971532 126971604 - Mir7016 miRNA miRNA MGP_BALBcJ_T0065718.1 MGP_BALBcJ_G0028275.1 mouse_genomes_project 4 49784498 49785443 + MGP_BALBcJ_P0065718 Olfr270 protein_coding protein_coding MGP_BALBcJ_T0065719.1 MGP_BALBcJ_G0028275.1 mouse_genomes_project 4 49784504 49785443 + MGP_BALBcJ_P0065719 Olfr270 protein_coding protein_coding MGP_BALBcJ_T0065394.1 MGP_BALBcJ_G0028194.1 mouse_genomes_project 4 40385425 40386250 - MGP_BALBcJ_P0065394 Spag8 protein_coding protein_coding MGP_BALBcJ_T0065395.1 MGP_BALBcJ_G0028194.1 mouse_genomes_project 4 40385425 40387643 - MGP_BALBcJ_P0065395 Spag8 protein_coding protein_coding MGP_BALBcJ_T0065396.1 MGP_BALBcJ_G0028194.1 mouse_genomes_project 4 40385766 40387685 - MGP_BALBcJ_P0065396 Spag8 protein_coding protein_coding MGP_BALBcJ_T0067960.1 MGP_BALBcJ_G0028800.1 mouse_genomes_project 4 126553047 126575198 + MGP_BALBcJ_P0067960 Sync protein_coding protein_coding MGP_BALBcJ_T0067961.1 MGP_BALBcJ_G0028800.1 mouse_genomes_project 4 126553061 126574002 + Sync protein_coding retained_intron MGP_BALBcJ_T0067321.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114940370 114943281 - MGP_BALBcJ_P0067321 Atp6v0b protein_coding protein_coding MGP_BALBcJ_T0067322.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114940376 114941941 - Atp6v0b protein_coding retained_intron MGP_BALBcJ_T0067323.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114940491 114941847 - Atp6v0b protein_coding retained_intron MGP_BALBcJ_T0067324.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114941210 114942683 - Atp6v0b protein_coding retained_intron MGP_BALBcJ_T0067325.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114941277 114942605 - MGP_BALBcJ_P0067325 Atp6v0b protein_coding protein_coding MGP_BALBcJ_T0067326.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114941681 114943332 - MGP_BALBcJ_P0067326 Atp6v0b protein_coding protein_coding MGP_BALBcJ_T0067327.1 MGP_BALBcJ_G0028640.1 mouse_genomes_project 4 114942327 114943378 - MGP_BALBcJ_P0067327 Atp6v0b protein_coding protein_coding MGP_BALBcJ_T0018047.1 MGP_BALBcJ_G0015510.1 mouse_genomes_project 4 116037669 116067120 + Gm12861 processed_transcript processed_transcript MGP_BALBcJ_T0010558.1 MGP_BALBcJ_G0008683.1 mouse_genomes_project 4 10089406 10089527 - Gm23162 miRNA miRNA MGP_BALBcJ_T0066812.1 MGP_BALBcJ_G0028535.1 mouse_genomes_project 4 105374178 105390109 - MGP_BALBcJ_P0066812 Fam159a protein_coding protein_coding MGP_BALBcJ_T0007982.1 MGP_BALBcJ_G0006511.1 mouse_genomes_project 4 137342561 137359490 - 4933427I22Rik lincRNA lincRNA MGP_BALBcJ_T0007983.1 MGP_BALBcJ_G0006511.1 mouse_genomes_project 4 137343133 137349334 - 4933427I22Rik lincRNA lincRNA MGP_BALBcJ_T0014754.1 MGP_BALBcJ_G0012851.1 mouse_genomes_project 4 127048788 127049076 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067306.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114923621 114924940 - Ccdc24 protein_coding processed_transcript MGP_BALBcJ_T0067307.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114924714 114927326 - Ccdc24 protein_coding retained_intron MGP_BALBcJ_T0067309.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114925590 114928546 - MGP_BALBcJ_P0067309 Ccdc24 protein_coding protein_coding MGP_BALBcJ_T0067310.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114925590 114928176 - MGP_BALBcJ_P0067310 Ccdc24 protein_coding protein_coding MGP_BALBcJ_T0067311.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114925731 114927360 - Ccdc24 protein_coding processed_transcript MGP_BALBcJ_T0067312.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114926109 114928583 - MGP_BALBcJ_P0067312 Ccdc24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067313.1 MGP_BALBcJ_G0028638.1 mouse_genomes_project 4 114926506 114928546 - MGP_BALBcJ_P0067313 Ccdc24 protein_coding protein_coding MGP_BALBcJ_T0099815.1 MGP_BALBcJ_G0037851.1 mouse_genomes_project 4 22347687 22347790 - Gm24042 snRNA snRNA MGP_BALBcJ_T0018063.1 MGP_BALBcJ_G0015517.1 mouse_genomes_project 4 129058580 129079197 - Gm12992 processed_transcript processed_transcript MGP_BALBcJ_T0018064.1 MGP_BALBcJ_G0015517.1 mouse_genomes_project 4 129071594 129074687 - Gm12992 processed_transcript processed_transcript MGP_BALBcJ_T0067209.1 MGP_BALBcJ_G0028619.1 mouse_genomes_project 4 113853752 113855556 - MGP_BALBcJ_P0067209 Hpdl protein_coding protein_coding MGP_BALBcJ_T0101102.1 MGP_BALBcJ_G0039138.1 mouse_genomes_project 4 10710524 10710651 + Gm24908 snoRNA snoRNA MGP_BALBcJ_T0064930.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31261305 31308845 - MGP_BALBcJ_P0064930 Orc3 protein_coding protein_coding MGP_BALBcJ_T0064931.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31261305 31308814 - MGP_BALBcJ_P0064931 Orc3 protein_coding protein_coding MGP_BALBcJ_T0064932.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31262074 31292686 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0064933.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31262907 31267690 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0064934.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31268436 31308812 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0064935.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31286467 31289123 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0064936.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31286993 31308794 - MGP_BALBcJ_P0064936 Orc3 protein_coding protein_coding MGP_BALBcJ_T0064937.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31292636 31308804 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0064938.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31292724 31308810 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0064939.1 MGP_BALBcJ_G0028096.1 mouse_genomes_project 4 31293310 31308805 - Orc3 protein_coding processed_transcript MGP_BALBcJ_T0068413.1 MGP_BALBcJ_G0028891.1 mouse_genomes_project 4 131291601 131296770 + MGP_BALBcJ_P0068413 Zfp683 protein_coding protein_coding MGP_BALBcJ_T0068602.1 MGP_BALBcJ_G0028936.1 mouse_genomes_project 4 133209293 133229160 + MGP_BALBcJ_P0068602 Fuca1 protein_coding protein_coding MGP_BALBcJ_T0068603.1 MGP_BALBcJ_G0028936.1 mouse_genomes_project 4 133218394 133223266 + Fuca1 protein_coding processed_transcript MGP_BALBcJ_T0068604.1 MGP_BALBcJ_G0028936.1 mouse_genomes_project 4 133221490 133227835 + Fuca1 protein_coding processed_transcript MGP_BALBcJ_T0068605.1 MGP_BALBcJ_G0028936.1 mouse_genomes_project 4 133221617 133223835 + Fuca1 protein_coding processed_transcript MGP_BALBcJ_T0068606.1 MGP_BALBcJ_G0028936.1 mouse_genomes_project 4 133225189 133227835 + Fuca1 protein_coding processed_transcript MGP_BALBcJ_T0004538.1 MGP_BALBcJ_G0003942.1 mouse_genomes_project 4 133309353 133309761 - Gm24362 antisense antisense MGP_BALBcJ_T0099883.1 MGP_BALBcJ_G0037919.1 mouse_genomes_project 4 131105014 131105114 - Gm22523 snRNA snRNA MGP_BALBcJ_T0065349.1 MGP_BALBcJ_G0028187.1 mouse_genomes_project 4 40244389 40254214 - Tpm2 protein_coding processed_transcript MGP_BALBcJ_T0065350.1 MGP_BALBcJ_G0028187.1 mouse_genomes_project 4 40244389 40254240 - MGP_BALBcJ_P0065350 Tpm2 protein_coding protein_coding MGP_BALBcJ_T0065351.1 MGP_BALBcJ_G0028187.1 mouse_genomes_project 4 40244389 40254371 - MGP_BALBcJ_P0065351 Tpm2 protein_coding protein_coding MGP_BALBcJ_T0065352.1 MGP_BALBcJ_G0028187.1 mouse_genomes_project 4 40244390 40254164 - MGP_BALBcJ_P0065352 Tpm2 protein_coding protein_coding MGP_BALBcJ_T0065353.1 MGP_BALBcJ_G0028187.1 mouse_genomes_project 4 40245360 40250448 - Tpm2 protein_coding processed_transcript MGP_BALBcJ_T0065354.1 MGP_BALBcJ_G0028187.1 mouse_genomes_project 4 40250446 40254541 - MGP_BALBcJ_P0065354 Tpm2 protein_coding protein_coding MGP_BALBcJ_T0068679.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133857253 133909780 - MGP_BALBcJ_P0068679 Kdm1a protein_coding protein_coding MGP_BALBcJ_T0068680.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133857257 133909744 - MGP_BALBcJ_P0068680 Kdm1a protein_coding protein_coding MGP_BALBcJ_T0068681.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133857563 133909365 - MGP_BALBcJ_P0068681 Kdm1a protein_coding protein_coding MGP_BALBcJ_T0068682.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133857592 133859254 - Kdm1a protein_coding retained_intron MGP_BALBcJ_T0068683.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133858587 133859884 - Kdm1a protein_coding retained_intron MGP_BALBcJ_T0068684.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133859832 133862046 - Kdm1a protein_coding retained_intron MGP_BALBcJ_T0068685.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133861928 133868020 - Kdm1a protein_coding retained_intron MGP_BALBcJ_T0068686.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133861956 133875125 - MGP_BALBcJ_P0068686 Kdm1a protein_coding protein_coding MGP_BALBcJ_T0068687.1 MGP_BALBcJ_G0028952.1 mouse_genomes_project 4 133865051 133883966 - MGP_BALBcJ_P0068687 Kdm1a protein_coding protein_coding MGP_BALBcJ_T0010583.1 MGP_BALBcJ_G0008708.1 mouse_genomes_project 4 77989348 77989444 + Gm27452 miRNA miRNA MGP_BALBcJ_T0010611.1 MGP_BALBcJ_G0008736.1 mouse_genomes_project 4 129380689 129380779 - Gm22033 miRNA miRNA MGP_BALBcJ_T0014529.1 MGP_BALBcJ_G0012626.1 mouse_genomes_project 4 49248463 49248721 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068132.1 MGP_BALBcJ_G0028833.1 mouse_genomes_project 4 127666638 127696539 + MGP_BALBcJ_P0068132 Snrnp40 protein_coding protein_coding MGP_BALBcJ_T0068133.1 MGP_BALBcJ_G0028833.1 mouse_genomes_project 4 127666700 127682103 + Snrnp40 protein_coding processed_transcript MGP_BALBcJ_T0068134.1 MGP_BALBcJ_G0028833.1 mouse_genomes_project 4 127669133 127671939 + Snrnp40 protein_coding processed_transcript MGP_BALBcJ_T0068135.1 MGP_BALBcJ_G0028833.1 mouse_genomes_project 4 127691548 127695141 + Snrnp40 protein_coding processed_transcript MGP_BALBcJ_T0068671.1 MGP_BALBcJ_G0028950.1 mouse_genomes_project 4 133760636 133762352 + MGP_BALBcJ_P0068671 protein_coding protein_coding MGP_BALBcJ_T0068956.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138516300 138528140 - Necap2 protein_coding processed_transcript MGP_BALBcJ_T0068957.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138516300 138528155 - MGP_BALBcJ_P0068957 Necap2 protein_coding protein_coding MGP_BALBcJ_T0068958.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138517135 138524855 - Necap2 protein_coding retained_intron MGP_BALBcJ_T0068959.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138517183 138518627 - Necap2 protein_coding retained_intron MGP_BALBcJ_T0068960.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138517304 138521628 - Necap2 protein_coding retained_intron MGP_BALBcJ_T0068961.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138517351 138523494 - MGP_BALBcJ_P0068961 Necap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068962.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138517997 138528155 - Necap2 protein_coding processed_transcript MGP_BALBcJ_T0068963.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138519870 138528155 - Necap2 protein_coding processed_transcript MGP_BALBcJ_T0068964.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138519940 138521562 - Necap2 protein_coding retained_intron MGP_BALBcJ_T0068965.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138519968 138528092 - Necap2 protein_coding retained_intron MGP_BALBcJ_T0068966.1 MGP_BALBcJ_G0029020.1 mouse_genomes_project 4 138522117 138528155 - Necap2 protein_coding retained_intron MGP_BALBcJ_T0066303.1 MGP_BALBcJ_G0028431.1 mouse_genomes_project 4 91556840 91565752 - Plaa protein_coding processed_transcript MGP_BALBcJ_T0066304.1 MGP_BALBcJ_G0028431.1 mouse_genomes_project 4 91558493 91592806 - MGP_BALBcJ_P0066304 Plaa protein_coding protein_coding MGP_BALBcJ_T0066305.1 MGP_BALBcJ_G0028431.1 mouse_genomes_project 4 91561013 91573627 - MGP_BALBcJ_P0066305 Plaa protein_coding protein_coding MGP_BALBcJ_T0066306.1 MGP_BALBcJ_G0028431.1 mouse_genomes_project 4 91563225 91573606 - Plaa protein_coding processed_transcript MGP_BALBcJ_T0066307.1 MGP_BALBcJ_G0028431.1 mouse_genomes_project 4 91575888 91592697 - Plaa protein_coding processed_transcript MGP_BALBcJ_T0066308.1 MGP_BALBcJ_G0028431.1 mouse_genomes_project 4 91579822 91592743 - Plaa protein_coding processed_transcript MGP_BALBcJ_T0098600.1 MGP_BALBcJ_G0036654.1 mouse_genomes_project 4 78903634 78903745 + n-R5s187 rRNA rRNA MGP_BALBcJ_T0069818.1 MGP_BALBcJ_G0029209.1 mouse_genomes_project 4 153881593 153884327 + MGP_BALBcJ_P0069818 Ankrd65 protein_coding protein_coding MGP_BALBcJ_T0069819.1 MGP_BALBcJ_G0029209.1 mouse_genomes_project 4 153882326 153891223 + MGP_BALBcJ_P0069819 Ankrd65 protein_coding protein_coding MGP_BALBcJ_T0068584.1 MGP_BALBcJ_G0028928.1 mouse_genomes_project 4 132766469 132791828 + Stpg1 protein_coding processed_transcript MGP_BALBcJ_T0068585.1 MGP_BALBcJ_G0028928.1 mouse_genomes_project 4 132767656 132806394 + Stpg1 protein_coding processed_transcript MGP_BALBcJ_T0068586.1 MGP_BALBcJ_G0028928.1 mouse_genomes_project 4 132767666 132810207 + MGP_BALBcJ_P0068586 Stpg1 protein_coding protein_coding MGP_BALBcJ_T0007808.1 MGP_BALBcJ_G0006382.1 mouse_genomes_project 4 41690729 41694990 + Gm12678 lincRNA lincRNA MGP_BALBcJ_T0014644.1 MGP_BALBcJ_G0012741.1 mouse_genomes_project 4 94532150 94532817 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014724.1 MGP_BALBcJ_G0012821.1 mouse_genomes_project 4 118215070 118215493 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014720.1 MGP_BALBcJ_G0012817.1 mouse_genomes_project 4 116614040 116614417 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068835.1 MGP_BALBcJ_G0028992.1 mouse_genomes_project 4 136362402 136380635 + MGP_BALBcJ_P0068835 Tmco4 protein_coding protein_coding MGP_BALBcJ_T0068836.1 MGP_BALBcJ_G0028992.1 mouse_genomes_project 4 136362406 136448459 + MGP_BALBcJ_P0068836 Tmco4 protein_coding protein_coding MGP_BALBcJ_T0068837.1 MGP_BALBcJ_G0028992.1 mouse_genomes_project 4 136362419 136448455 + MGP_BALBcJ_P0068837 Tmco4 protein_coding protein_coding MGP_BALBcJ_T0068838.1 MGP_BALBcJ_G0028992.1 mouse_genomes_project 4 136362423 136425446 + Tmco4 protein_coding processed_transcript MGP_BALBcJ_T0068839.1 MGP_BALBcJ_G0028992.1 mouse_genomes_project 4 136373036 136448463 + MGP_BALBcJ_P0068839 Tmco4 protein_coding unknown_likely_coding MGP_BALBcJ_T0068589.1 MGP_BALBcJ_G0028930.1 mouse_genomes_project 4 132959674 132981938 + MGP_BALBcJ_P0068589 Ifnlr1 protein_coding protein_coding MGP_BALBcJ_T0069670.1 MGP_BALBcJ_G0029182.1 mouse_genomes_project 4 152966854 152970389 - Fam213b protein_coding processed_transcript MGP_BALBcJ_T0069671.1 MGP_BALBcJ_G0029182.1 mouse_genomes_project 4 152967749 152970461 - MGP_BALBcJ_P0069671 Fam213b protein_coding protein_coding MGP_BALBcJ_T0069672.1 MGP_BALBcJ_G0029182.1 mouse_genomes_project 4 152968685 152970486 - MGP_BALBcJ_P0069672 Fam213b protein_coding protein_coding MGP_BALBcJ_T0065548.1 MGP_BALBcJ_G0028227.1 mouse_genomes_project 4 42606532 42645246 + MGP_BALBcJ_P0065548 Stra6l protein_coding protein_coding MGP_BALBcJ_T0065549.1 MGP_BALBcJ_G0028227.1 mouse_genomes_project 4 42606684 42645246 + MGP_BALBcJ_P0065549 Stra6l protein_coding protein_coding MGP_BALBcJ_T0065550.1 MGP_BALBcJ_G0028227.1 mouse_genomes_project 4 42606815 42645246 + MGP_BALBcJ_P0065550 Stra6l protein_coding protein_coding MGP_BALBcJ_T0065551.1 MGP_BALBcJ_G0028227.1 mouse_genomes_project 4 42606865 42618314 + Stra6l protein_coding processed_transcript MGP_BALBcJ_T0065552.1 MGP_BALBcJ_G0028227.1 mouse_genomes_project 4 42632080 42644856 + Stra6l protein_coding retained_intron MGP_BALBcJ_T0069903.1 MGP_BALBcJ_G0029224.1 mouse_genomes_project 4 154099506 154102288 + MGP_BALBcJ_P0069903 Tnfrsf4 protein_coding protein_coding MGP_BALBcJ_T0069904.1 MGP_BALBcJ_G0029224.1 mouse_genomes_project 4 154099519 154102275 + Tnfrsf4 protein_coding processed_transcript MGP_BALBcJ_T0069905.1 MGP_BALBcJ_G0029224.1 mouse_genomes_project 4 154099912 154100922 + Tnfrsf4 protein_coding processed_transcript MGP_BALBcJ_T0066846.1 MGP_BALBcJ_G0028542.1 mouse_genomes_project 4 105733197 105795687 + MGP_BALBcJ_P0066846 3110021N24Rik protein_coding protein_coding MGP_BALBcJ_T0065036.1 MGP_BALBcJ_G0028120.1 mouse_genomes_project 4 37710855 37722743 - MGP_BALBcJ_P0065036 Bag1 protein_coding protein_coding MGP_BALBcJ_T0065037.1 MGP_BALBcJ_G0028120.1 mouse_genomes_project 4 37710856 37722756 - MGP_BALBcJ_P0065037 Bag1 protein_coding protein_coding MGP_BALBcJ_T0065038.1 MGP_BALBcJ_G0028120.1 mouse_genomes_project 4 37710858 37722705 - MGP_BALBcJ_P0065038 Bag1 protein_coding protein_coding MGP_BALBcJ_T0064624.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7490635 7514402 - MGP_BALBcJ_P0064624 Ndufaf6 protein_coding protein_coding MGP_BALBcJ_T0064625.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7490640 7497068 - Ndufaf6 protein_coding processed_transcript MGP_BALBcJ_T0064626.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7490803 7514347 - Ndufaf6 protein_coding processed_transcript MGP_BALBcJ_T0064627.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7497057 7514347 - Ndufaf6 protein_coding processed_transcript MGP_BALBcJ_T0064628.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7500036 7514381 - Ndufaf6 protein_coding processed_transcript MGP_BALBcJ_T0064629.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7508451 7514403 - Ndufaf6 protein_coding processed_transcript MGP_BALBcJ_T0064630.1 MGP_BALBcJ_G0028016.1 mouse_genomes_project 4 7511189 7514386 - Ndufaf6 protein_coding processed_transcript MGP_BALBcJ_T0066363.1 MGP_BALBcJ_G0028441.1 mouse_genomes_project 4 93053555 93098071 - MGP_BALBcJ_P0066363 Cyp2j12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066364.1 MGP_BALBcJ_G0028441.1 mouse_genomes_project 4 93053812 93098057 - MGP_BALBcJ_P0066364 Cyp2j12 protein_coding protein_coding MGP_BALBcJ_T0068899.1 MGP_BALBcJ_G0029007.1 mouse_genomes_project 4 137370691 137378594 - MGP_BALBcJ_P0068899 Klhdc7a protein_coding protein_coding MGP_BALBcJ_T0099850.1 MGP_BALBcJ_G0037886.1 mouse_genomes_project 4 93898848 93898912 + Gm27521 snRNA snRNA MGP_BALBcJ_T0007898.1 MGP_BALBcJ_G0006453.1 mouse_genomes_project 4 104764773 104770094 + Gm12907 lincRNA lincRNA MGP_BALBcJ_T0014772.1 MGP_BALBcJ_G0012869.1 mouse_genomes_project 4 133287092 133287457 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067029.1 MGP_BALBcJ_G0028583.1 mouse_genomes_project 4 112470584 112480533 - MGP_BALBcJ_P0067029 Cyp4a14 protein_coding protein_coding MGP_BALBcJ_T0067030.1 MGP_BALBcJ_G0028583.1 mouse_genomes_project 4 112478452 112480531 - Cyp4a14 protein_coding processed_transcript MGP_BALBcJ_T0065187.1 MGP_BALBcJ_G0028161.1 mouse_genomes_project 4 39322465 39323708 + MGP_BALBcJ_P0065187 protein_coding protein_coding MGP_BALBcJ_T0067643.1 MGP_BALBcJ_G0028726.1 mouse_genomes_project 4 120947449 120971241 + Rhbdl2 protein_coding processed_transcript MGP_BALBcJ_T0067644.1 MGP_BALBcJ_G0028726.1 mouse_genomes_project 4 120947450 120993432 + MGP_BALBcJ_P0067644 Rhbdl2 protein_coding protein_coding MGP_BALBcJ_T0067645.1 MGP_BALBcJ_G0028726.1 mouse_genomes_project 4 120957780 120969884 + Rhbdl2 protein_coding processed_transcript MGP_BALBcJ_T0067646.1 MGP_BALBcJ_G0028726.1 mouse_genomes_project 4 120969656 120993432 + MGP_BALBcJ_P0067646 Rhbdl2 protein_coding protein_coding MGP_BALBcJ_T0067647.1 MGP_BALBcJ_G0028726.1 mouse_genomes_project 4 120973105 120976074 + Rhbdl2 protein_coding processed_transcript MGP_BALBcJ_T0068859.1 MGP_BALBcJ_G0028997.1 mouse_genomes_project 4 136686160 136702915 - MGP_BALBcJ_P0068859 Pqlc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068860.1 MGP_BALBcJ_G0028997.1 mouse_genomes_project 4 136690739 136702938 - MGP_BALBcJ_P0068860 Pqlc2 protein_coding protein_coding MGP_BALBcJ_T0068861.1 MGP_BALBcJ_G0028997.1 mouse_genomes_project 4 136690741 136702895 - MGP_BALBcJ_P0068861 Pqlc2 protein_coding protein_coding MGP_BALBcJ_T0068862.1 MGP_BALBcJ_G0028997.1 mouse_genomes_project 4 136690741 136702908 - MGP_BALBcJ_P0068862 Pqlc2 protein_coding protein_coding MGP_BALBcJ_T0068863.1 MGP_BALBcJ_G0028997.1 mouse_genomes_project 4 136693535 136702867 - MGP_BALBcJ_P0068863 Pqlc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065509.1 MGP_BALBcJ_G0028217.1 mouse_genomes_project 4 41784201 41834459 - MGP_BALBcJ_P0065509 Fbxo10 protein_coding protein_coding MGP_BALBcJ_T0065510.1 MGP_BALBcJ_G0028217.1 mouse_genomes_project 4 41784202 41811959 - MGP_BALBcJ_P0065510 Fbxo10 protein_coding protein_coding MGP_BALBcJ_T0065511.1 MGP_BALBcJ_G0028217.1 mouse_genomes_project 4 41796242 41808573 - Fbxo10 protein_coding processed_transcript MGP_BALBcJ_T0101093.1 MGP_BALBcJ_G0039129.1 mouse_genomes_project 4 78280 78407 + Gm22541 snoRNA snoRNA MGP_BALBcJ_T0068221.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129477590 129496704 - MGP_BALBcJ_P0068221 Trnau1ap protein_coding protein_coding MGP_BALBcJ_T0068222.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129477590 129496655 - MGP_BALBcJ_P0068222 Trnau1ap protein_coding protein_coding MGP_BALBcJ_T0068223.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129477592 129496682 - Trnau1ap protein_coding retained_intron MGP_BALBcJ_T0068224.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129477676 129496660 - Trnau1ap protein_coding processed_transcript MGP_BALBcJ_T0068225.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129477692 129496555 - MGP_BALBcJ_P0068225 Trnau1ap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068226.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129480034 129496580 - MGP_BALBcJ_P0068226 Trnau1ap protein_coding protein_coding MGP_BALBcJ_T0068227.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129480140 129496670 - MGP_BALBcJ_P0068227 Trnau1ap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068228.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129480177 129496648 - Trnau1ap protein_coding processed_transcript MGP_BALBcJ_T0068229.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129480180 129496704 - MGP_BALBcJ_P0068229 Trnau1ap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068230.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129487238 129491314 - Trnau1ap protein_coding retained_intron MGP_BALBcJ_T0068231.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129487716 129496704 - MGP_BALBcJ_P0068231 Trnau1ap protein_coding protein_coding MGP_BALBcJ_T0068232.1 MGP_BALBcJ_G0028850.1 mouse_genomes_project 4 129495274 129496681 - Trnau1ap protein_coding retained_intron MGP_BALBcJ_T0066545.1 MGP_BALBcJ_G0028485.1 mouse_genomes_project 4 100012903 100015888 - MGP_BALBcJ_P0066545 Insl5 protein_coding protein_coding MGP_BALBcJ_T0066546.1 MGP_BALBcJ_G0028485.1 mouse_genomes_project 4 100013145 100015993 - MGP_BALBcJ_P0066546 Insl5 protein_coding protein_coding MGP_BALBcJ_T0064676.1 MGP_BALBcJ_G0028026.1 mouse_genomes_project 4 8230770 8292241 + MGP_BALBcJ_P0064676 Cdh17 protein_coding protein_coding MGP_BALBcJ_T0064677.1 MGP_BALBcJ_G0028026.1 mouse_genomes_project 4 8230816 8285832 + MGP_BALBcJ_P0064677 Cdh17 protein_coding protein_coding MGP_BALBcJ_T0004471.1 MGP_BALBcJ_G0003889.1 mouse_genomes_project 4 97510259 97514814 - Ube2uos antisense antisense MGP_BALBcJ_T0014592.1 MGP_BALBcJ_G0012689.1 mouse_genomes_project 4 73308392 73309339 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067571.1 MGP_BALBcJ_G0028706.1 mouse_genomes_project 4 118398849 118407404 - MGP_BALBcJ_P0067571 Gm12888 protein_coding protein_coding MGP_BALBcJ_T0065701.1 MGP_BALBcJ_G0028267.1 mouse_genomes_project 4 46493498 46496776 - MGP_BALBcJ_P0065701 Ppp3r2 protein_coding protein_coding MGP_BALBcJ_T0101137.1 MGP_BALBcJ_G0039173.1 mouse_genomes_project 4 70044726 70044853 + Gm25769 snoRNA snoRNA MGP_BALBcJ_T0014650.1 MGP_BALBcJ_G0012747.1 mouse_genomes_project 4 96118397 96119116 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069104.1 MGP_BALBcJ_G0029063.1 mouse_genomes_project 4 141641142 141643970 + MGP_BALBcJ_P0069104 protein_coding protein_coding MGP_BALBcJ_T0069281.1 MGP_BALBcJ_G0029113.1 mouse_genomes_project 4 146910172 147050721 - MGP_BALBcJ_P0069281 Pex14 protein_coding protein_coding MGP_BALBcJ_T0069282.1 MGP_BALBcJ_G0029113.1 mouse_genomes_project 4 146912874 147050661 - Pex14 protein_coding retained_intron MGP_BALBcJ_T0069283.1 MGP_BALBcJ_G0029113.1 mouse_genomes_project 4 146933667 147050660 - Pex14 protein_coding processed_transcript MGP_BALBcJ_T0069284.1 MGP_BALBcJ_G0029113.1 mouse_genomes_project 4 146934418 147050654 - MGP_BALBcJ_P0069284 Pex14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069285.1 MGP_BALBcJ_G0029113.1 mouse_genomes_project 4 146964860 147050673 - Pex14 protein_coding processed_transcript MGP_BALBcJ_T0067463.1 MGP_BALBcJ_G0028679.1 mouse_genomes_project 4 116372344 116400010 - MGP_BALBcJ_P0067463 Ppih protein_coding protein_coding MGP_BALBcJ_T0067464.1 MGP_BALBcJ_G0028679.1 mouse_genomes_project 4 116372344 116399997 - MGP_BALBcJ_P0067464 Ppih protein_coding protein_coding MGP_BALBcJ_T0067465.1 MGP_BALBcJ_G0028679.1 mouse_genomes_project 4 116372344 116400059 - MGP_BALBcJ_P0067465 Ppih protein_coding protein_coding MGP_BALBcJ_T0067466.1 MGP_BALBcJ_G0028679.1 mouse_genomes_project 4 116385798 116399930 - MGP_BALBcJ_P0067466 Ppih protein_coding protein_coding MGP_BALBcJ_T0067467.1 MGP_BALBcJ_G0028679.1 mouse_genomes_project 4 116386371 116399997 - MGP_BALBcJ_P0067467 Ppih protein_coding protein_coding MGP_BALBcJ_T0067468.1 MGP_BALBcJ_G0028679.1 mouse_genomes_project 4 116390836 116400012 - MGP_BALBcJ_P0067468 Ppih protein_coding protein_coding MGP_BALBcJ_T0101099.1 MGP_BALBcJ_G0039135.1 mouse_genomes_project 4 3129112 3129244 - Gm22473 snoRNA snoRNA MGP_BALBcJ_T0065678.1 MGP_BALBcJ_G0028260.1 mouse_genomes_project 4 46301978 46318223 - MGP_BALBcJ_P0065678 Baat protein_coding protein_coding MGP_BALBcJ_T0065679.1 MGP_BALBcJ_G0028260.1 mouse_genomes_project 4 46302376 46314804 - MGP_BALBcJ_P0065679 Baat protein_coding protein_coding MGP_BALBcJ_T0014388.1 MGP_BALBcJ_G0012485.1 mouse_genomes_project 4 7382300 7382786 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064721.1 MGP_BALBcJ_G0028037.1 mouse_genomes_project 4 11261927 11277909 - MGP_BALBcJ_P0064721 Otud6b protein_coding protein_coding MGP_BALBcJ_T0102546.1 MGP_BALBcJ_G0040362.1 mouse_genomes_project 4 119891731 119907327 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0067690.1 MGP_BALBcJ_G0028739.1 mouse_genomes_project 4 122030437 122037362 - MGP_BALBcJ_P0067690 Maneal protein_coding protein_coding MGP_BALBcJ_T0007851.1 MGP_BALBcJ_G0006418.1 mouse_genomes_project 4 79031078 79077270 + Gm5860 lincRNA lincRNA MGP_BALBcJ_T0007852.1 MGP_BALBcJ_G0006418.1 mouse_genomes_project 4 79031520 79033381 + Gm5860 lincRNA lincRNA MGP_BALBcJ_T0007853.1 MGP_BALBcJ_G0006418.1 mouse_genomes_project 4 79031604 79073813 + Gm5860 lincRNA lincRNA MGP_BALBcJ_T0014494.1 MGP_BALBcJ_G0012591.1 mouse_genomes_project 4 36539282 36540077 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067530.1 MGP_BALBcJ_G0028692.1 mouse_genomes_project 4 117605808 117610239 + MGP_BALBcJ_P0067530 Slfnl1 protein_coding protein_coding MGP_BALBcJ_T0065263.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792009 39891668 + Unc13b protein_coding retained_intron MGP_BALBcJ_T0065264.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792025 39994231 + MGP_BALBcJ_P0065264 Unc13b protein_coding protein_coding MGP_BALBcJ_T0065265.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792032 39897018 + Unc13b protein_coding processed_transcript MGP_BALBcJ_T0065266.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792040 39894101 + Unc13b protein_coding retained_intron MGP_BALBcJ_T0065267.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792129 39992988 + MGP_BALBcJ_P0065267 Unc13b protein_coding protein_coding MGP_BALBcJ_T0065268.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792129 39992988 + MGP_BALBcJ_P0065268 Unc13b protein_coding protein_coding MGP_BALBcJ_T0065269.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792136 39992971 + MGP_BALBcJ_P0065269 Unc13b protein_coding protein_coding MGP_BALBcJ_T0065270.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39792320 39908680 + MGP_BALBcJ_P0065270 Unc13b protein_coding unknown_likely_coding MGP_BALBcJ_T0065271.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39847496 39962114 + Unc13b protein_coding processed_transcript MGP_BALBcJ_T0065272.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39903513 39956880 + Unc13b protein_coding processed_transcript MGP_BALBcJ_T0065273.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39906126 39961432 + MGP_BALBcJ_P0065273 Unc13b protein_coding protein_coding MGP_BALBcJ_T0065274.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39940140 39994240 + MGP_BALBcJ_P0065274 Unc13b protein_coding unknown_likely_coding MGP_BALBcJ_T0065275.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39954444 39957295 + Unc13b protein_coding retained_intron MGP_BALBcJ_T0065276.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39958144 39975386 + Unc13b protein_coding retained_intron MGP_BALBcJ_T0065277.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39978113 39985211 + Unc13b protein_coding retained_intron MGP_BALBcJ_T0065278.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39984489 39987368 + MGP_BALBcJ_P0065278 Unc13b protein_coding protein_coding MGP_BALBcJ_T0065279.1 MGP_BALBcJ_G0028177.1 mouse_genomes_project 4 39985776 39990687 + Unc13b protein_coding retained_intron MGP_BALBcJ_T0101108.1 MGP_BALBcJ_G0039144.1 mouse_genomes_project 4 30366548 30366673 - Gm24341 snoRNA snoRNA MGP_BALBcJ_T0099858.1 MGP_BALBcJ_G0037894.1 mouse_genomes_project 4 105539968 105540075 - Gm25827 snRNA snRNA MGP_BALBcJ_T0098940.1 MGP_BALBcJ_G0036987.1 mouse_genomes_project 4 28893168 28907258 + Bach2it1 sense_intronic sense_intronic MGP_BALBcJ_T0011559.1 MGP_BALBcJ_G0009684.1 mouse_genomes_project 4 111972963 111973061 + Gm24045 misc_RNA misc_RNA MGP_BALBcJ_T0069097.1 MGP_BALBcJ_G0029058.1 mouse_genomes_project 4 141249267 141261874 + MGP_BALBcJ_P0069097 protein_coding protein_coding MGP_BALBcJ_T0065376.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40310515 40319629 + MGP_BALBcJ_P0065376 Rgp1 protein_coding protein_coding MGP_BALBcJ_T0065377.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40310535 40319627 + MGP_BALBcJ_P0065377 Rgp1 protein_coding protein_coding MGP_BALBcJ_T0065378.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40310754 40312722 + Rgp1 protein_coding processed_transcript MGP_BALBcJ_T0065379.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40310758 40314929 + MGP_BALBcJ_P0065379 Rgp1 protein_coding protein_coding MGP_BALBcJ_T0065380.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40310783 40311421 + Rgp1 protein_coding retained_intron MGP_BALBcJ_T0065381.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40311535 40312718 + Rgp1 protein_coding retained_intron MGP_BALBcJ_T0065382.1 MGP_BALBcJ_G0028191.1 mouse_genomes_project 4 40313012 40313519 + Rgp1 protein_coding retained_intron MGP_BALBcJ_T0065484.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41501546 41507740 + MGP_BALBcJ_P0065484 Zcchc7 protein_coding protein_coding MGP_BALBcJ_T0065485.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41502237 41679192 + MGP_BALBcJ_P0065485 Zcchc7 protein_coding protein_coding MGP_BALBcJ_T0065486.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41502257 41657141 + Zcchc7 protein_coding retained_intron MGP_BALBcJ_T0065487.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41502308 41507997 + MGP_BALBcJ_P0065487 Zcchc7 protein_coding protein_coding MGP_BALBcJ_T0065488.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41502316 41655471 + MGP_BALBcJ_P0065488 Zcchc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065489.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41506212 41658203 + Zcchc7 protein_coding retained_intron MGP_BALBcJ_T0065490.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41652856 41678351 + Zcchc7 protein_coding processed_transcript MGP_BALBcJ_T0065491.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41669261 41679204 + MGP_BALBcJ_P0065491 Zcchc7 protein_coding protein_coding MGP_BALBcJ_T0065492.1 MGP_BALBcJ_G0028213.1 mouse_genomes_project 4 41672136 41678351 + MGP_BALBcJ_P0065492 Zcchc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004423.1 MGP_BALBcJ_G0003854.1 mouse_genomes_project 4 38420153 38422202 + Gm12406 antisense antisense MGP_BALBcJ_T0067835.1 MGP_BALBcJ_G0028772.1 mouse_genomes_project 4 124239924 124249839 + MGP_BALBcJ_P0067835 Sfpq protein_coding protein_coding MGP_BALBcJ_T0067836.1 MGP_BALBcJ_G0028772.1 mouse_genomes_project 4 124241983 124245919 + Sfpq protein_coding processed_transcript MGP_BALBcJ_T0067837.1 MGP_BALBcJ_G0028772.1 mouse_genomes_project 4 124242127 124255620 + Sfpq protein_coding processed_transcript MGP_BALBcJ_T0067838.1 MGP_BALBcJ_G0028772.1 mouse_genomes_project 4 124244526 124245217 + Sfpq protein_coding processed_transcript MGP_BALBcJ_T0067839.1 MGP_BALBcJ_G0028772.1 mouse_genomes_project 4 124244558 124246618 + Sfpq protein_coding processed_transcript MGP_BALBcJ_T0067840.1 MGP_BALBcJ_G0028772.1 mouse_genomes_project 4 124245047 124246152 + Sfpq protein_coding processed_transcript MGP_BALBcJ_T0098368.1 MGP_BALBcJ_G0036422.1 mouse_genomes_project 4 2930458 2933333 - pseudogene pseudogene MGP_BALBcJ_T0099896.1 MGP_BALBcJ_G0037932.1 mouse_genomes_project 4 148970186 148970346 + Gm23405 snRNA snRNA MGP_BALBcJ_T0068398.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131194056 131230215 - MGP_BALBcJ_P0068398 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068399.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131194085 131230212 - MGP_BALBcJ_P0068399 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068400.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131194086 131209789 - Dhdds protein_coding processed_transcript MGP_BALBcJ_T0068401.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131194091 131229718 - Dhdds protein_coding processed_transcript MGP_BALBcJ_T0068402.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131194203 131230196 - Dhdds protein_coding processed_transcript MGP_BALBcJ_T0068403.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131195220 131230196 - MGP_BALBcJ_P0068403 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068404.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131195948 131223701 - MGP_BALBcJ_P0068404 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068405.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131195976 131229718 - MGP_BALBcJ_P0068405 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068406.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131196008 131229718 - MGP_BALBcJ_P0068406 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068407.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131196270 131230243 - MGP_BALBcJ_P0068407 Dhdds protein_coding protein_coding MGP_BALBcJ_T0068408.1 MGP_BALBcJ_G0028889.1 mouse_genomes_project 4 131209371 131226444 - Dhdds protein_coding processed_transcript MGP_BALBcJ_T0098375.1 MGP_BALBcJ_G0036429.1 mouse_genomes_project 4 153780820 153782960 + pseudogene pseudogene MGP_BALBcJ_T0069358.1 MGP_BALBcJ_G0029126.1 mouse_genomes_project 4 147681844 147704508 - MGP_BALBcJ_P0069358 Tmem201 protein_coding protein_coding MGP_BALBcJ_T0069359.1 MGP_BALBcJ_G0029126.1 mouse_genomes_project 4 147681852 147704508 - MGP_BALBcJ_P0069359 Tmem201 protein_coding protein_coding MGP_BALBcJ_T0069360.1 MGP_BALBcJ_G0029126.1 mouse_genomes_project 4 147691322 147697135 - Tmem201 protein_coding retained_intron MGP_BALBcJ_T0069361.1 MGP_BALBcJ_G0029126.1 mouse_genomes_project 4 147691322 147704508 - MGP_BALBcJ_P0069361 Tmem201 protein_coding protein_coding MGP_BALBcJ_T0069362.1 MGP_BALBcJ_G0029126.1 mouse_genomes_project 4 147695246 147704462 - Tmem201 protein_coding retained_intron MGP_BALBcJ_T0069363.1 MGP_BALBcJ_G0029126.1 mouse_genomes_project 4 147697611 147704234 - Tmem201 protein_coding processed_transcript MGP_BALBcJ_T0007815.1 MGP_BALBcJ_G0006388.1 mouse_genomes_project 4 45705132 45772108 + lincRNA lincRNA MGP_BALBcJ_T0069546.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150351686 150358421 + Rpl22 protein_coding processed_transcript MGP_BALBcJ_T0069547.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150351797 150358425 + MGP_BALBcJ_P0069547 Rpl22 protein_coding protein_coding MGP_BALBcJ_T0069548.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150351811 150360016 + MGP_BALBcJ_P0069548 Rpl22 protein_coding protein_coding MGP_BALBcJ_T0069549.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150351813 150360015 + MGP_BALBcJ_P0069549 Rpl22 protein_coding protein_coding MGP_BALBcJ_T0069550.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150353011 150355991 + Rpl22 protein_coding processed_transcript MGP_BALBcJ_T0069551.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150353070 150356220 + Rpl22 protein_coding processed_transcript MGP_BALBcJ_T0069552.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150353424 150358418 + Rpl22 protein_coding processed_transcript MGP_BALBcJ_T0069553.1 MGP_BALBcJ_G0029161.1 mouse_genomes_project 4 150353501 150358419 + Rpl22 protein_coding processed_transcript MGP_BALBcJ_T0068688.1 MGP_BALBcJ_G0028953.1 mouse_genomes_project 4 133917398 133920976 + MGP_BALBcJ_P0068688 4930549C01Rik protein_coding protein_coding MGP_BALBcJ_T0068054.1 MGP_BALBcJ_G0028818.1 mouse_genomes_project 4 126928395 126959435 - MGP_BALBcJ_P0068054 Kpna6 protein_coding protein_coding MGP_BALBcJ_T0068055.1 MGP_BALBcJ_G0028818.1 mouse_genomes_project 4 126938363 126939644 - Kpna6 protein_coding retained_intron MGP_BALBcJ_T0068056.1 MGP_BALBcJ_G0028818.1 mouse_genomes_project 4 126939011 126941453 - Kpna6 protein_coding retained_intron MGP_BALBcJ_T0068057.1 MGP_BALBcJ_G0028818.1 mouse_genomes_project 4 126942173 126959283 - MGP_BALBcJ_P0068057 Kpna6 protein_coding protein_coding MGP_BALBcJ_T0068058.1 MGP_BALBcJ_G0028818.1 mouse_genomes_project 4 126945711 126959522 - Kpna6 protein_coding retained_intron MGP_BALBcJ_T0068282.1 MGP_BALBcJ_G0028861.1 mouse_genomes_project 4 129953163 129961455 + Rpa2 protein_coding processed_transcript MGP_BALBcJ_T0068283.1 MGP_BALBcJ_G0028861.1 mouse_genomes_project 4 129953166 129963489 + MGP_BALBcJ_P0068283 Rpa2 protein_coding protein_coding MGP_BALBcJ_T0068284.1 MGP_BALBcJ_G0028861.1 mouse_genomes_project 4 129953207 129958980 + Rpa2 protein_coding retained_intron MGP_BALBcJ_T0068285.1 MGP_BALBcJ_G0028861.1 mouse_genomes_project 4 129953466 129956864 + Rpa2 protein_coding retained_intron MGP_BALBcJ_T0068286.1 MGP_BALBcJ_G0028861.1 mouse_genomes_project 4 129955261 129957052 + Rpa2 protein_coding retained_intron MGP_BALBcJ_T0068287.1 MGP_BALBcJ_G0028861.1 mouse_genomes_project 4 129959872 129961899 + MGP_BALBcJ_P0068287 Rpa2 protein_coding protein_coding MGP_BALBcJ_T0066766.1 MGP_BALBcJ_G0028527.1 mouse_genomes_project 4 104908140 104928401 - MGP_BALBcJ_P0066766 Cpt2 protein_coding protein_coding MGP_BALBcJ_T0066767.1 MGP_BALBcJ_G0028527.1 mouse_genomes_project 4 104908142 104928351 - MGP_BALBcJ_P0066767 Cpt2 protein_coding protein_coding MGP_BALBcJ_T0066768.1 MGP_BALBcJ_G0028527.1 mouse_genomes_project 4 104912125 104928336 - MGP_BALBcJ_P0066768 Cpt2 protein_coding protein_coding MGP_BALBcJ_T0066769.1 MGP_BALBcJ_G0028527.1 mouse_genomes_project 4 104912212 104917569 - Cpt2 protein_coding retained_intron MGP_BALBcJ_T0066770.1 MGP_BALBcJ_G0028527.1 mouse_genomes_project 4 104912359 104928238 - Cpt2 protein_coding processed_transcript MGP_BALBcJ_T0066771.1 MGP_BALBcJ_G0028527.1 mouse_genomes_project 4 104912714 104928379 - MGP_BALBcJ_P0066771 Cpt2 protein_coding protein_coding MGP_BALBcJ_T0014383.1 MGP_BALBcJ_G0012480.1 mouse_genomes_project 4 6406695 6407618 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068382.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131069054 131109386 - MGP_BALBcJ_P0068382 Rps6ka1 protein_coding protein_coding MGP_BALBcJ_T0068383.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131069063 131109408 - MGP_BALBcJ_P0068383 Rps6ka1 protein_coding protein_coding MGP_BALBcJ_T0068384.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131069063 131096349 - MGP_BALBcJ_P0068384 Rps6ka1 protein_coding protein_coding MGP_BALBcJ_T0068385.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131069585 131093845 - MGP_BALBcJ_P0068385 Rps6ka1 protein_coding protein_coding MGP_BALBcJ_T0068386.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131069817 131094649 - MGP_BALBcJ_P0068386 Rps6ka1 protein_coding protein_coding MGP_BALBcJ_T0068387.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131072219 131082541 - Rps6ka1 protein_coding retained_intron MGP_BALBcJ_T0068388.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131081778 131082653 - Rps6ka1 protein_coding retained_intron MGP_BALBcJ_T0068389.1 MGP_BALBcJ_G0028887.1 mouse_genomes_project 4 131093495 131109198 - Rps6ka1 protein_coding processed_transcript MGP_BALBcJ_T0010605.1 MGP_BALBcJ_G0008730.1 mouse_genomes_project 4 123775563 123775622 + Mir7119 miRNA miRNA MGP_BALBcJ_T0064588.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5733011 5745979 + Clvs1 protein_coding processed_transcript MGP_BALBcJ_T0064589.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5733035 5816936 + Clvs1 protein_coding processed_transcript MGP_BALBcJ_T0064590.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5733035 5919445 + MGP_BALBcJ_P0064590 Clvs1 protein_coding protein_coding MGP_BALBcJ_T0064591.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5733048 5745977 + Clvs1 protein_coding processed_transcript MGP_BALBcJ_T0064592.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5733065 5745139 + Clvs1 protein_coding processed_transcript MGP_BALBcJ_T0064593.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5735169 5919445 + MGP_BALBcJ_P0064593 Clvs1 protein_coding protein_coding MGP_BALBcJ_T0064594.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5775152 5897737 + Clvs1 protein_coding processed_transcript MGP_BALBcJ_T0064595.1 MGP_BALBcJ_G0028011.1 mouse_genomes_project 4 5799007 5897774 + Clvs1 protein_coding processed_transcript MGP_BALBcJ_T0014518.1 MGP_BALBcJ_G0012615.1 mouse_genomes_project 4 45549570 45549906 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066263.1 MGP_BALBcJ_G0028409.1 mouse_genomes_project 4 85665739 85666669 - MGP_BALBcJ_P0066263 Ifna16 protein_coding protein_coding MGP_BALBcJ_T0064952.1 MGP_BALBcJ_G0028099.1 mouse_genomes_project 4 31382515 31424391 - MGP_BALBcJ_P0064952 Cfap206 protein_coding protein_coding MGP_BALBcJ_T0064953.1 MGP_BALBcJ_G0028099.1 mouse_genomes_project 4 31382917 31413806 - Cfap206 protein_coding processed_transcript MGP_BALBcJ_T0064954.1 MGP_BALBcJ_G0028099.1 mouse_genomes_project 4 31405340 31424363 - MGP_BALBcJ_P0064954 Cfap206 protein_coding protein_coding MGP_BALBcJ_T0064955.1 MGP_BALBcJ_G0028099.1 mouse_genomes_project 4 31415581 31424380 - MGP_BALBcJ_P0064955 Cfap206 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064956.1 MGP_BALBcJ_G0028099.1 mouse_genomes_project 4 31415612 31424380 - MGP_BALBcJ_P0064956 Cfap206 protein_coding protein_coding MGP_BALBcJ_T0064957.1 MGP_BALBcJ_G0028099.1 mouse_genomes_project 4 31417757 31424380 - Cfap206 protein_coding processed_transcript MGP_BALBcJ_T0066083.1 MGP_BALBcJ_G0028376.1 mouse_genomes_project 4 77861343 77864900 + MGP_BALBcJ_P0066083 Tyrp1 protein_coding protein_coding MGP_BALBcJ_T0066084.1 MGP_BALBcJ_G0028376.1 mouse_genomes_project 4 77861450 77878894 + MGP_BALBcJ_P0066084 Tyrp1 protein_coding protein_coding MGP_BALBcJ_T0066085.1 MGP_BALBcJ_G0028376.1 mouse_genomes_project 4 77861524 77878895 + MGP_BALBcJ_P0066085 Tyrp1 protein_coding protein_coding MGP_BALBcJ_T0066086.1 MGP_BALBcJ_G0028376.1 mouse_genomes_project 4 77873762 77878176 + MGP_BALBcJ_P0066086 Tyrp1 protein_coding protein_coding MGP_BALBcJ_T0064517.1 MGP_BALBcJ_G0027996.1 mouse_genomes_project 4 432139 469529 - MGP_BALBcJ_P0064517 Plag1 protein_coding protein_coding MGP_BALBcJ_T0064518.1 MGP_BALBcJ_G0027996.1 mouse_genomes_project 4 436033 469552 - MGP_BALBcJ_P0064518 Plag1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064519.1 MGP_BALBcJ_G0027996.1 mouse_genomes_project 4 436692 469570 - MGP_BALBcJ_P0064519 Plag1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064520.1 MGP_BALBcJ_G0027996.1 mouse_genomes_project 4 443000 469540 - Plag1 protein_coding retained_intron MGP_BALBcJ_T0066275.1 MGP_BALBcJ_G0028421.1 mouse_genomes_project 4 86180962 86226733 + MGP_BALBcJ_P0066275 Mtap protein_coding protein_coding MGP_BALBcJ_T0066276.1 MGP_BALBcJ_G0028421.1 mouse_genomes_project 4 86222015 86225126 + Mtap protein_coding processed_transcript MGP_BALBcJ_T0067409.1 MGP_BALBcJ_G0028663.1 mouse_genomes_project 4 115922664 115951660 + MGP_BALBcJ_P0067409 protein_coding protein_coding MGP_BALBcJ_T0064553.1 MGP_BALBcJ_G0028004.1 mouse_genomes_project 4 2752399 2762587 - MGP_BALBcJ_P0064553 Cyp7a1 protein_coding protein_coding MGP_BALBcJ_T0064554.1 MGP_BALBcJ_G0028004.1 mouse_genomes_project 4 2759753 2762589 - Cyp7a1 protein_coding processed_transcript MGP_BALBcJ_T0068696.1 MGP_BALBcJ_G0028956.1 mouse_genomes_project 4 134198294 134208836 - MGP_BALBcJ_P0068696 C1qb protein_coding protein_coding MGP_BALBcJ_T0014715.1 MGP_BALBcJ_G0012812.1 mouse_genomes_project 4 116053166 116054172 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067388.1 MGP_BALBcJ_G0028653.1 mouse_genomes_project 4 115585782 115588640 + MGP_BALBcJ_P0067388 2610528J11Rik protein_coding protein_coding MGP_BALBcJ_T0067389.1 MGP_BALBcJ_G0028653.1 mouse_genomes_project 4 115586026 115589013 + MGP_BALBcJ_P0067389 2610528J11Rik protein_coding protein_coding MGP_BALBcJ_T0064827.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21140304 21332572 - MGP_BALBcJ_P0064827 Klhl32 protein_coding protein_coding MGP_BALBcJ_T0064828.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21140304 21390036 - MGP_BALBcJ_P0064828 Klhl32 protein_coding protein_coding MGP_BALBcJ_T0064829.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21145240 21278410 - MGP_BALBcJ_P0064829 Klhl32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064830.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21145329 21389843 - MGP_BALBcJ_P0064830 Klhl32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064831.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21146547 21389998 - MGP_BALBcJ_P0064831 Klhl32 protein_coding protein_coding MGP_BALBcJ_T0064832.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21185330 21389843 - Klhl32 protein_coding retained_intron MGP_BALBcJ_T0064833.1 MGP_BALBcJ_G0028068.1 mouse_genomes_project 4 21185872 21210339 - Klhl32 protein_coding processed_transcript MGP_BALBcJ_T0014792.1 MGP_BALBcJ_G0012889.1 mouse_genomes_project 4 141277399 141282998 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066598.1 MGP_BALBcJ_G0028496.1 mouse_genomes_project 4 102028654 102108010 - MGP_BALBcJ_P0066598 Prkaa2 protein_coding protein_coding MGP_BALBcJ_T0065028.1 MGP_BALBcJ_G0028117.1 mouse_genomes_project 4 37503168 37524742 - MGP_BALBcJ_P0065028 Smu1 protein_coding protein_coding MGP_BALBcJ_T0065029.1 MGP_BALBcJ_G0028117.1 mouse_genomes_project 4 37510209 37524702 - Smu1 protein_coding processed_transcript MGP_BALBcJ_T0065030.1 MGP_BALBcJ_G0028117.1 mouse_genomes_project 4 37521246 37524650 - Smu1 protein_coding processed_transcript MGP_BALBcJ_T0065031.1 MGP_BALBcJ_G0028117.1 mouse_genomes_project 4 37522558 37524217 - Smu1 protein_coding processed_transcript MGP_BALBcJ_T0067075.1 MGP_BALBcJ_G0028594.1 mouse_genomes_project 4 112909190 112917747 + MGP_BALBcJ_P0067075 6430628N08Rik protein_coding protein_coding MGP_BALBcJ_T0065919.1 MGP_BALBcJ_G0028333.1 mouse_genomes_project 4 59362526 59370492 - MGP_BALBcJ_P0065919 Rnf183 protein_coding protein_coding MGP_BALBcJ_T0065920.1 MGP_BALBcJ_G0028333.1 mouse_genomes_project 4 59362528 59369966 - MGP_BALBcJ_P0065920 Rnf183 protein_coding protein_coding MGP_BALBcJ_T0065921.1 MGP_BALBcJ_G0028333.1 mouse_genomes_project 4 59362973 59363546 - MGP_BALBcJ_P0065921 Rnf183 protein_coding protein_coding MGP_BALBcJ_T0011542.1 MGP_BALBcJ_G0009667.1 mouse_genomes_project 4 42888088 42888355 + Gm23250 misc_RNA misc_RNA MGP_BALBcJ_T0098721.1 MGP_BALBcJ_G0036775.1 mouse_genomes_project 4 48612030 48612463 + Gm24943 ribozyme ribozyme MGP_BALBcJ_T0014693.1 MGP_BALBcJ_G0012790.1 mouse_genomes_project 4 108791329 108792323 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011541.1 MGP_BALBcJ_G0009666.1 mouse_genomes_project 4 40642699 40642776 + Gm27265 misc_RNA misc_RNA MGP_BALBcJ_T0014448.1 MGP_BALBcJ_G0012545.1 mouse_genomes_project 4 22970430 22971158 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068390.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190372 131193679 - MGP_BALBcJ_P0068390 protein_coding protein_coding MGP_BALBcJ_T0068391.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190566 131192925 - protein_coding retained_intron MGP_BALBcJ_T0068392.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190566 131192304 - protein_coding processed_transcript MGP_BALBcJ_T0068393.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190566 131192280 - protein_coding processed_transcript MGP_BALBcJ_T0068394.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190566 131193679 - protein_coding processed_transcript MGP_BALBcJ_T0068395.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190566 131192910 - MGP_BALBcJ_P0068395 protein_coding protein_coding MGP_BALBcJ_T0068396.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190620 131192907 - protein_coding retained_intron MGP_BALBcJ_T0068397.1 MGP_BALBcJ_G0028888.1 mouse_genomes_project 4 131190630 131192877 - protein_coding retained_intron MGP_BALBcJ_T0007980.1 MGP_BALBcJ_G0006509.1 mouse_genomes_project 4 137327466 137328909 + Gm1667 lincRNA lincRNA MGP_BALBcJ_T0004575.1 MGP_BALBcJ_G0003969.1 mouse_genomes_project 4 147287266 147288525 + Ube4bos3 antisense antisense MGP_BALBcJ_T0064727.1 MGP_BALBcJ_G0028040.1 mouse_genomes_project 4 11741009 11761819 + MGP_BALBcJ_P0064727 Tmem64 protein_coding protein_coding MGP_BALBcJ_T0069663.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152939735 152966872 + MGP_BALBcJ_P0069663 Mmel1 protein_coding protein_coding MGP_BALBcJ_T0069664.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152939735 152966879 + MGP_BALBcJ_P0069664 Mmel1 protein_coding protein_coding MGP_BALBcJ_T0069665.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152939786 152966879 + MGP_BALBcJ_P0069665 Mmel1 protein_coding protein_coding MGP_BALBcJ_T0069666.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152941755 152966872 + MGP_BALBcJ_P0069666 Mmel1 protein_coding protein_coding MGP_BALBcJ_T0069667.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152941789 152966872 + MGP_BALBcJ_P0069667 Mmel1 protein_coding protein_coding MGP_BALBcJ_T0069668.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152953271 152957030 + MGP_BALBcJ_P0069668 Mmel1 protein_coding protein_coding MGP_BALBcJ_T0069669.1 MGP_BALBcJ_G0029181.1 mouse_genomes_project 4 152964175 152965306 + Mmel1 protein_coding retained_intron MGP_BALBcJ_T0068206.1 MGP_BALBcJ_G0028844.1 mouse_genomes_project 4 129235255 129237551 + MGP_BALBcJ_P0068206 Gm10300 protein_coding protein_coding MGP_BALBcJ_T0014532.1 MGP_BALBcJ_G0012629.1 mouse_genomes_project 4 49631352 49631973 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068773.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585564 135615437 + MGP_BALBcJ_P0068773 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068774.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585903 135590987 + Hp1bp3 protein_coding processed_transcript MGP_BALBcJ_T0068775.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585926 135615440 + MGP_BALBcJ_P0068775 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068776.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585929 135596582 + MGP_BALBcJ_P0068776 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068777.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585930 135613902 + MGP_BALBcJ_P0068777 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068778.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585937 135599319 + MGP_BALBcJ_P0068778 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068779.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135585938 135615437 + MGP_BALBcJ_P0068779 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068780.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135586430 135600293 + MGP_BALBcJ_P0068780 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068781.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135586577 135600280 + Hp1bp3 protein_coding retained_intron MGP_BALBcJ_T0068782.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135586603 135592867 + MGP_BALBcJ_P0068782 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068783.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135599126 135611493 + MGP_BALBcJ_P0068783 Hp1bp3 protein_coding protein_coding MGP_BALBcJ_T0068784.1 MGP_BALBcJ_G0028973.1 mouse_genomes_project 4 135600192 135605365 + Hp1bp3 protein_coding processed_transcript MGP_BALBcJ_T0067168.1 MGP_BALBcJ_G0028612.1 mouse_genomes_project 4 113662212 113677891 - MGP_BALBcJ_P0067168 Akr1a1 protein_coding protein_coding MGP_BALBcJ_T0067169.1 MGP_BALBcJ_G0028612.1 mouse_genomes_project 4 113662213 113677607 - Akr1a1 protein_coding processed_transcript MGP_BALBcJ_T0067170.1 MGP_BALBcJ_G0028612.1 mouse_genomes_project 4 113662213 113663707 - Akr1a1 protein_coding processed_transcript MGP_BALBcJ_T0067171.1 MGP_BALBcJ_G0028612.1 mouse_genomes_project 4 113664798 113675685 - MGP_BALBcJ_P0067171 Akr1a1 protein_coding protein_coding MGP_BALBcJ_T0004452.1 MGP_BALBcJ_G0003880.1 mouse_genomes_project 4 83497032 83498386 + Saxo1os antisense antisense MGP_BALBcJ_T0064976.1 MGP_BALBcJ_G0028107.1 mouse_genomes_project 4 31885720 31921143 - MGP_BALBcJ_P0064976 3110043O21Rik protein_coding protein_coding MGP_BALBcJ_T0064977.1 MGP_BALBcJ_G0028107.1 mouse_genomes_project 4 31885725 31921445 - MGP_BALBcJ_P0064977 3110043O21Rik protein_coding protein_coding MGP_BALBcJ_T0064978.1 MGP_BALBcJ_G0028107.1 mouse_genomes_project 4 31895577 31905152 - 3110043O21Rik protein_coding retained_intron MGP_BALBcJ_T0064979.1 MGP_BALBcJ_G0028107.1 mouse_genomes_project 4 31907763 31921497 - 3110043O21Rik protein_coding retained_intron MGP_BALBcJ_T0064980.1 MGP_BALBcJ_G0028107.1 mouse_genomes_project 4 31913749 31921445 - 3110043O21Rik protein_coding processed_transcript MGP_BALBcJ_T0064981.1 MGP_BALBcJ_G0028107.1 mouse_genomes_project 4 31913933 31921445 - 3110043O21Rik protein_coding processed_transcript MGP_BALBcJ_T0065161.1 MGP_BALBcJ_G0028149.1 mouse_genomes_project 4 38569238 38570978 - MGP_BALBcJ_P0065161 protein_coding protein_coding MGP_BALBcJ_T0065162.1 MGP_BALBcJ_G0028149.1 mouse_genomes_project 4 38569238 38569931 - MGP_BALBcJ_P0065162 protein_coding protein_coding MGP_BALBcJ_T0067813.1 MGP_BALBcJ_G0028769.1 mouse_genomes_project 4 123965008 123975054 - MGP_BALBcJ_P0067813 Ncdn protein_coding protein_coding MGP_BALBcJ_T0067814.1 MGP_BALBcJ_G0028769.1 mouse_genomes_project 4 123965989 123975083 - Ncdn protein_coding processed_transcript MGP_BALBcJ_T0067815.1 MGP_BALBcJ_G0028769.1 mouse_genomes_project 4 123965989 123975072 - MGP_BALBcJ_P0067815 Ncdn protein_coding protein_coding MGP_BALBcJ_T0099823.1 MGP_BALBcJ_G0037859.1 mouse_genomes_project 4 36622115 36622197 + Gm22850 snRNA snRNA MGP_BALBcJ_T0014564.1 MGP_BALBcJ_G0012661.1 mouse_genomes_project 4 63665744 63666219 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067734.1 MGP_BALBcJ_G0028752.1 mouse_genomes_project 4 123298629 123300590 + MGP_BALBcJ_P0067734 Lsm10 protein_coding protein_coding MGP_BALBcJ_T0067735.1 MGP_BALBcJ_G0028752.1 mouse_genomes_project 4 123298659 123300587 + MGP_BALBcJ_P0067735 Lsm10 protein_coding protein_coding MGP_BALBcJ_T0067736.1 MGP_BALBcJ_G0028752.1 mouse_genomes_project 4 123298666 123300139 + MGP_BALBcJ_P0067736 Lsm10 protein_coding protein_coding MGP_BALBcJ_T0004416.1 MGP_BALBcJ_G0003849.1 mouse_genomes_project 4 29207537 29223397 - Bach2os antisense antisense MGP_BALBcJ_T0004417.1 MGP_BALBcJ_G0003849.1 mouse_genomes_project 4 29210961 29223352 - Bach2os antisense antisense MGP_BALBcJ_T0004418.1 MGP_BALBcJ_G0003849.1 mouse_genomes_project 4 29213504 29223443 - Bach2os antisense antisense MGP_BALBcJ_T0018035.1 MGP_BALBcJ_G0015502.1 mouse_genomes_project 4 100534215 100549512 - Gm12720 processed_transcript processed_transcript MGP_BALBcJ_T0004531.1 MGP_BALBcJ_G0003936.1 mouse_genomes_project 4 130683473 130686649 - Gm13257 antisense antisense MGP_BALBcJ_T0014435.1 MGP_BALBcJ_G0012532.1 mouse_genomes_project 4 19232768 19233470 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068632.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133319925 133320463 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068633.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133319925 133345311 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068634.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133342355 133346019 - MGP_BALBcJ_P0068634 Rpl11 protein_coding protein_coding MGP_BALBcJ_T0068635.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133342571 133343151 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068636.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133342614 133345622 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068637.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133342904 133345716 - MGP_BALBcJ_P0068637 Rpl11 protein_coding protein_coding MGP_BALBcJ_T0068638.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133342956 133345380 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068639.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133343257 133345332 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068640.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133343652 133345342 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0068641.1 MGP_BALBcJ_G0028942.1 mouse_genomes_project 4 133343865 133346054 - Rpl11 protein_coding processed_transcript MGP_BALBcJ_T0069379.1 MGP_BALBcJ_G0029130.1 mouse_genomes_project 4 148063999 148082839 + MGP_BALBcJ_P0069379 Gpr157 protein_coding protein_coding MGP_BALBcJ_T0004495.1 MGP_BALBcJ_G0003907.1 mouse_genomes_project 4 114036015 114036862 - 1700021J08Rik antisense antisense MGP_BALBcJ_T0101169.1 MGP_BALBcJ_G0039205.1 mouse_genomes_project 4 127924663 127924746 + Gm23711 snoRNA snoRNA MGP_BALBcJ_T0014520.1 MGP_BALBcJ_G0012617.1 mouse_genomes_project 4 46155139 46156145 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068409.1 MGP_BALBcJ_G0028890.1 mouse_genomes_project 4 131232637 131249119 - MGP_BALBcJ_P0068409 Lin28a protein_coding protein_coding MGP_BALBcJ_T0068410.1 MGP_BALBcJ_G0028890.1 mouse_genomes_project 4 131235556 131241989 - MGP_BALBcJ_P0068410 Lin28a protein_coding protein_coding MGP_BALBcJ_T0068411.1 MGP_BALBcJ_G0028890.1 mouse_genomes_project 4 131235562 131238586 - MGP_BALBcJ_P0068411 Lin28a protein_coding protein_coding MGP_BALBcJ_T0068412.1 MGP_BALBcJ_G0028890.1 mouse_genomes_project 4 131237226 131248660 - MGP_BALBcJ_P0068412 Lin28a protein_coding protein_coding MGP_BALBcJ_T0101129.1 MGP_BALBcJ_G0039165.1 mouse_genomes_project 4 53693992 53694125 - Gm25053 snoRNA snoRNA MGP_BALBcJ_T0014815.1 MGP_BALBcJ_G0012912.1 mouse_genomes_project 4 152113638 152114329 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067600.1 MGP_BALBcJ_G0028716.1 mouse_genomes_project 4 120268328 120281120 - MGP_BALBcJ_P0067600 Ppie protein_coding protein_coding MGP_BALBcJ_T0067601.1 MGP_BALBcJ_G0028716.1 mouse_genomes_project 4 120268533 120278069 - Ppie protein_coding processed_transcript MGP_BALBcJ_T0067602.1 MGP_BALBcJ_G0028716.1 mouse_genomes_project 4 120268914 120280195 - Ppie protein_coding processed_transcript MGP_BALBcJ_T0067603.1 MGP_BALBcJ_G0028716.1 mouse_genomes_project 4 120277572 120281099 - Ppie protein_coding processed_transcript MGP_BALBcJ_T0014651.1 MGP_BALBcJ_G0012748.1 mouse_genomes_project 4 96445665 96445879 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066272.1 MGP_BALBcJ_G0028418.1 mouse_genomes_project 4 85871019 85871541 + MGP_BALBcJ_P0066272 Ifna1 protein_coding protein_coding MGP_BALBcJ_T0102533.1 MGP_BALBcJ_G0040349.1 mouse_genomes_project 4 112437639 112452247 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0064834.1 MGP_BALBcJ_G0028069.1 mouse_genomes_project 4 21436756 21443668 + MGP_BALBcJ_P0064834 Ndufaf4 protein_coding protein_coding MGP_BALBcJ_T0064835.1 MGP_BALBcJ_G0028069.1 mouse_genomes_project 4 21436804 21442172 + Ndufaf4 protein_coding processed_transcript MGP_BALBcJ_T0064836.1 MGP_BALBcJ_G0028069.1 mouse_genomes_project 4 21436849 21442152 + MGP_BALBcJ_P0064836 Ndufaf4 protein_coding protein_coding MGP_BALBcJ_T0067551.1 MGP_BALBcJ_G0028699.1 mouse_genomes_project 4 118011258 118012087 - MGP_BALBcJ_P0067551 Exo5 protein_coding protein_coding MGP_BALBcJ_T0067552.1 MGP_BALBcJ_G0028699.1 mouse_genomes_project 4 118011258 118015035 - MGP_BALBcJ_P0067552 Exo5 protein_coding protein_coding MGP_BALBcJ_T0067553.1 MGP_BALBcJ_G0028699.1 mouse_genomes_project 4 118011264 118015035 - MGP_BALBcJ_P0067553 Exo5 protein_coding protein_coding MGP_BALBcJ_T0067554.1 MGP_BALBcJ_G0028699.1 mouse_genomes_project 4 118012331 118015047 - MGP_BALBcJ_P0067554 Exo5 protein_coding protein_coding MGP_BALBcJ_T0004580.1 MGP_BALBcJ_G0003973.1 mouse_genomes_project 4 147521923 147524064 - Gm13066 antisense antisense MGP_BALBcJ_T0064563.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2882113 2939253 - Nsmaf protein_coding retained_intron MGP_BALBcJ_T0064564.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2882113 2939253 - MGP_BALBcJ_P0064564 Nsmaf protein_coding protein_coding MGP_BALBcJ_T0064565.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2882317 2884913 - Nsmaf protein_coding retained_intron MGP_BALBcJ_T0064566.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2882675 2939078 - Nsmaf protein_coding processed_transcript MGP_BALBcJ_T0064567.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2892296 2939237 - Nsmaf protein_coding processed_transcript MGP_BALBcJ_T0064568.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2894915 2909813 - Nsmaf protein_coding retained_intron MGP_BALBcJ_T0064569.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2910394 2918335 - Nsmaf protein_coding retained_intron MGP_BALBcJ_T0064570.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2914276 2938561 - Nsmaf protein_coding processed_transcript MGP_BALBcJ_T0064571.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2915555 2931748 - Nsmaf protein_coding processed_transcript MGP_BALBcJ_T0064572.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2918908 2939079 - MGP_BALBcJ_P0064572 Nsmaf protein_coding protein_coding MGP_BALBcJ_T0064573.1 MGP_BALBcJ_G0028006.1 mouse_genomes_project 4 2923549 2929814 - Nsmaf protein_coding processed_transcript MGP_BALBcJ_T0067572.1 MGP_BALBcJ_G0028707.1 mouse_genomes_project 4 118497751 118716404 - MGP_BALBcJ_P0067572 Gm12886 protein_coding protein_coding MGP_BALBcJ_T0008007.1 MGP_BALBcJ_G0006535.1 mouse_genomes_project 4 152725752 152726371 - Gm27202 lincRNA lincRNA MGP_BALBcJ_T0014411.1 MGP_BALBcJ_G0012508.1 mouse_genomes_project 4 12729443 12732164 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102516.1 MGP_BALBcJ_G0040332.1 mouse_genomes_project 4 85574945 85576633 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014467.1 MGP_BALBcJ_G0012564.1 mouse_genomes_project 4 28029378 28029853 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007796.1 MGP_BALBcJ_G0006370.1 mouse_genomes_project 4 27319935 27450094 + 4930556G01Rik lincRNA lincRNA MGP_BALBcJ_T0007992.1 MGP_BALBcJ_G0006520.1 mouse_genomes_project 4 139345342 139346736 + Gm29367 lincRNA lincRNA MGP_BALBcJ_T0014686.1 MGP_BALBcJ_G0012783.1 mouse_genomes_project 4 105947794 105948030 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065978.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367483 60449000 - MGP_BALBcJ_P0065978 Whrn protein_coding protein_coding MGP_BALBcJ_T0065979.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60447367 - Whrn protein_coding processed_transcript MGP_BALBcJ_T0065980.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60385901 - Whrn protein_coding retained_intron MGP_BALBcJ_T0065981.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60385901 - Whrn protein_coding retained_intron MGP_BALBcJ_T0065982.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60449718 - MGP_BALBcJ_P0065982 Whrn protein_coding protein_coding MGP_BALBcJ_T0065983.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60449718 - MGP_BALBcJ_P0065983 Whrn protein_coding protein_coding MGP_BALBcJ_T0065984.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60449718 - MGP_BALBcJ_P0065984 Whrn protein_coding protein_coding MGP_BALBcJ_T0065985.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60367488 60449718 - MGP_BALBcJ_P0065985 Whrn protein_coding protein_coding MGP_BALBcJ_T0065986.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60372047 60384508 - MGP_BALBcJ_P0065986 Whrn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065987.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60378290 60384581 - Whrn protein_coding processed_transcript MGP_BALBcJ_T0065988.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60384011 60449758 - MGP_BALBcJ_P0065988 Whrn protein_coding protein_coding MGP_BALBcJ_T0065989.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60387379 60414457 - Whrn protein_coding retained_intron MGP_BALBcJ_T0065990.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60388807 60426206 - MGP_BALBcJ_P0065990 Whrn protein_coding protein_coding MGP_BALBcJ_T0065991.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60413317 60448526 - MGP_BALBcJ_P0065991 Whrn protein_coding protein_coding MGP_BALBcJ_T0065992.1 MGP_BALBcJ_G0028349.1 mouse_genomes_project 4 60413974 60448444 - Whrn protein_coding retained_intron MGP_BALBcJ_T0004591.1 MGP_BALBcJ_G0003983.1 mouse_genomes_project 4 152681541 152684547 + Gm13134 antisense antisense MGP_BALBcJ_T0004592.1 MGP_BALBcJ_G0003983.1 mouse_genomes_project 4 152681659 152683049 + Gm13134 antisense antisense MGP_BALBcJ_T0067702.1 MGP_BALBcJ_G0028743.1 mouse_genomes_project 4 122199778 122223102 + MGP_BALBcJ_P0067702 Gnl2 protein_coding protein_coding MGP_BALBcJ_T0067703.1 MGP_BALBcJ_G0028743.1 mouse_genomes_project 4 122214749 122249111 + MGP_BALBcJ_P0067703 Gnl2 protein_coding protein_coding MGP_BALBcJ_T0067704.1 MGP_BALBcJ_G0028743.1 mouse_genomes_project 4 122214815 122232368 + Gnl2 protein_coding processed_transcript MGP_BALBcJ_T0067705.1 MGP_BALBcJ_G0028743.1 mouse_genomes_project 4 122232081 122234044 + Gnl2 protein_coding processed_transcript MGP_BALBcJ_T0067706.1 MGP_BALBcJ_G0028743.1 mouse_genomes_project 4 122234355 122237388 + Gnl2 protein_coding processed_transcript MGP_BALBcJ_T0067707.1 MGP_BALBcJ_G0028743.1 mouse_genomes_project 4 122246885 122249115 + Gnl2 protein_coding processed_transcript MGP_BALBcJ_T0017995.1 MGP_BALBcJ_G0015474.1 mouse_genomes_project 4 14913596 15400324 + processed_transcript processed_transcript MGP_BALBcJ_T0067093.1 MGP_BALBcJ_G0028598.1 mouse_genomes_project 4 113085130 113093268 - Uqcrh protein_coding processed_transcript MGP_BALBcJ_T0067094.1 MGP_BALBcJ_G0028598.1 mouse_genomes_project 4 113085130 113093305 - MGP_BALBcJ_P0067094 Uqcrh protein_coding protein_coding MGP_BALBcJ_T0067095.1 MGP_BALBcJ_G0028598.1 mouse_genomes_project 4 113085130 113093265 - MGP_BALBcJ_P0067095 Uqcrh protein_coding protein_coding MGP_BALBcJ_T0067096.1 MGP_BALBcJ_G0028598.1 mouse_genomes_project 4 113085131 113088325 - Uqcrh protein_coding retained_intron MGP_BALBcJ_T0067097.1 MGP_BALBcJ_G0028598.1 mouse_genomes_project 4 113088347 113093293 - Uqcrh protein_coding retained_intron MGP_BALBcJ_T0069169.1 MGP_BALBcJ_G0029091.1 mouse_genomes_project 4 145839742 145866871 - MGP_BALBcJ_P0069169 Plod1 protein_coding protein_coding MGP_BALBcJ_T0069170.1 MGP_BALBcJ_G0029091.1 mouse_genomes_project 4 145845932 145851232 - MGP_BALBcJ_P0069170 Plod1 protein_coding protein_coding MGP_BALBcJ_T0069171.1 MGP_BALBcJ_G0029091.1 mouse_genomes_project 4 145852598 145866846 - Plod1 protein_coding retained_intron MGP_BALBcJ_T0069172.1 MGP_BALBcJ_G0029091.1 mouse_genomes_project 4 145852985 145853863 - Plod1 protein_coding retained_intron MGP_BALBcJ_T0069173.1 MGP_BALBcJ_G0029091.1 mouse_genomes_project 4 145857744 145866829 - MGP_BALBcJ_P0069173 Plod1 protein_coding protein_coding MGP_BALBcJ_T0069174.1 MGP_BALBcJ_G0029091.1 mouse_genomes_project 4 145861816 145866812 - Plod1 protein_coding processed_transcript MGP_BALBcJ_T0065108.1 MGP_BALBcJ_G0028138.1 mouse_genomes_project 4 38469225 38569215 + MGP_BALBcJ_P0065108 protein_coding protein_coding MGP_BALBcJ_T0065141.1 MGP_BALBcJ_G0028138.1 mouse_genomes_project 4 38562705 38565280 + protein_coding retained_intron MGP_BALBcJ_T0065142.1 MGP_BALBcJ_G0028138.1 mouse_genomes_project 4 38562707 38567789 + protein_coding retained_intron MGP_BALBcJ_T0065144.1 MGP_BALBcJ_G0028138.1 mouse_genomes_project 4 38567527 38569137 + protein_coding retained_intron MGP_BALBcJ_T0065147.1 MGP_BALBcJ_G0028138.1 mouse_genomes_project 4 38568176 38569214 + protein_coding retained_intron MGP_BALBcJ_T0067567.1 MGP_BALBcJ_G0028704.1 mouse_genomes_project 4 118198232 118201808 - MGP_BALBcJ_P0067567 Tmco2 protein_coding protein_coding MGP_BALBcJ_T0069525.1 MGP_BALBcJ_G0029157.1 mouse_genomes_project 4 150299868 150310973 + MGP_BALBcJ_P0069525 Gpr153 protein_coding protein_coding MGP_BALBcJ_T0069526.1 MGP_BALBcJ_G0029157.1 mouse_genomes_project 4 150299998 150310973 + MGP_BALBcJ_P0069526 Gpr153 protein_coding protein_coding MGP_BALBcJ_T0069527.1 MGP_BALBcJ_G0029157.1 mouse_genomes_project 4 150304648 150310973 + MGP_BALBcJ_P0069527 Gpr153 protein_coding protein_coding MGP_BALBcJ_T0069528.1 MGP_BALBcJ_G0029157.1 mouse_genomes_project 4 150308005 150310972 + Gpr153 protein_coding processed_transcript MGP_BALBcJ_T0101162.1 MGP_BALBcJ_G0039198.1 mouse_genomes_project 4 118603502 118603634 + Gm26162 snoRNA snoRNA MGP_BALBcJ_T0066493.1 MGP_BALBcJ_G0028474.1 mouse_genomes_project 4 98463067 98573520 + MGP_BALBcJ_P0066493 Dnajc6 protein_coding protein_coding MGP_BALBcJ_T0066494.1 MGP_BALBcJ_G0028474.1 mouse_genomes_project 4 98474187 98609916 + MGP_BALBcJ_P0066494 Dnajc6 protein_coding protein_coding MGP_BALBcJ_T0066495.1 MGP_BALBcJ_G0028474.1 mouse_genomes_project 4 98474292 98578478 + MGP_BALBcJ_P0066495 Dnajc6 protein_coding protein_coding MGP_BALBcJ_T0066496.1 MGP_BALBcJ_G0028474.1 mouse_genomes_project 4 98474346 98565793 + Dnajc6 protein_coding processed_transcript MGP_BALBcJ_T0066497.1 MGP_BALBcJ_G0028474.1 mouse_genomes_project 4 98517543 98607690 + MGP_BALBcJ_P0066497 Dnajc6 protein_coding protein_coding MGP_BALBcJ_T0067332.1 MGP_BALBcJ_G0028642.1 mouse_genomes_project 4 114950532 114956711 - Ipo13 protein_coding processed_transcript MGP_BALBcJ_T0067333.1 MGP_BALBcJ_G0028642.1 mouse_genomes_project 4 114950532 114970719 - MGP_BALBcJ_P0067333 Ipo13 protein_coding protein_coding MGP_BALBcJ_T0067334.1 MGP_BALBcJ_G0028642.1 mouse_genomes_project 4 114950673 114951161 - Ipo13 protein_coding processed_transcript MGP_BALBcJ_T0067335.1 MGP_BALBcJ_G0028642.1 mouse_genomes_project 4 114950938 114951920 - Ipo13 protein_coding processed_transcript MGP_BALBcJ_T0067336.1 MGP_BALBcJ_G0028642.1 mouse_genomes_project 4 114951386 114951939 - Ipo13 protein_coding processed_transcript MGP_BALBcJ_T0067337.1 MGP_BALBcJ_G0028642.1 mouse_genomes_project 4 114957003 114959916 - Ipo13 protein_coding processed_transcript MGP_BALBcJ_T0066256.1 MGP_BALBcJ_G0028406.1 mouse_genomes_project 4 85595711 85596508 - MGP_BALBcJ_P0066256 Ifna12 protein_coding protein_coding MGP_BALBcJ_T0069364.1 MGP_BALBcJ_G0029127.1 mouse_genomes_project 4 147710454 147738327 - MGP_BALBcJ_P0069364 Slc25a33 protein_coding protein_coding MGP_BALBcJ_T0008002.1 MGP_BALBcJ_G0006530.1 mouse_genomes_project 4 148819909 148833751 + Gm13049 lincRNA lincRNA MGP_BALBcJ_T0065933.1 MGP_BALBcJ_G0028336.1 mouse_genomes_project 4 59432922 59436191 - MGP_BALBcJ_P0065933 Hdhd3 protein_coding protein_coding MGP_BALBcJ_T0065934.1 MGP_BALBcJ_G0028336.1 mouse_genomes_project 4 59433857 59437382 - Hdhd3 protein_coding processed_transcript MGP_BALBcJ_T0066850.1 MGP_BALBcJ_G0028544.1 mouse_genomes_project 4 105851191 105878081 + MGP_BALBcJ_P0066850 Txndc12 protein_coding protein_coding MGP_BALBcJ_T0066851.1 MGP_BALBcJ_G0028544.1 mouse_genomes_project 4 105851225 105862972 + Txndc12 protein_coding processed_transcript MGP_BALBcJ_T0066854.1 MGP_BALBcJ_G0028544.1 mouse_genomes_project 4 105873439 105875236 + Txndc12 protein_coding processed_transcript MGP_BALBcJ_T0099863.1 MGP_BALBcJ_G0037899.1 mouse_genomes_project 4 113941766 113941871 + Gm26355 snRNA snRNA MGP_BALBcJ_T0001410.1 MGP_BALBcJ_G0001332.1 mouse_genomes_project 4 96299101 96301565 + TEC TEC MGP_BALBcJ_T0098596.1 MGP_BALBcJ_G0036650.1 mouse_genomes_project 4 40426159 40426291 + Gm23257 rRNA rRNA MGP_BALBcJ_T0064622.1 MGP_BALBcJ_G0028015.1 mouse_genomes_project 4 7422746 7442021 - MGP_BALBcJ_P0064622 Plekhf2 protein_coding protein_coding MGP_BALBcJ_T0064623.1 MGP_BALBcJ_G0028015.1 mouse_genomes_project 4 7424828 7442272 - MGP_BALBcJ_P0064623 Plekhf2 protein_coding protein_coding MGP_BALBcJ_T0014471.1 MGP_BALBcJ_G0012568.1 mouse_genomes_project 4 29264190 29264565 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014541.1 MGP_BALBcJ_G0012638.1 mouse_genomes_project 4 51911873 51912234 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065158.1 MGP_BALBcJ_G0028148.1 mouse_genomes_project 4 38569217 38569965 - MGP_BALBcJ_P0065158 protein_coding protein_coding MGP_BALBcJ_T0065160.1 MGP_BALBcJ_G0028148.1 mouse_genomes_project 4 38569221 38576102 - MGP_BALBcJ_P0065160 protein_coding protein_coding MGP_BALBcJ_T0065173.1 MGP_BALBcJ_G0028148.1 mouse_genomes_project 4 38575690 38576659 - protein_coding processed_transcript MGP_BALBcJ_T0068891.1 MGP_BALBcJ_G0029003.1 mouse_genomes_project 4 137002056 137062762 + MGP_BALBcJ_P0068891 Gm21969 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064596.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 5915820 5943683 - Asph protein_coding processed_transcript MGP_BALBcJ_T0064597.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 5916830 6127180 - MGP_BALBcJ_P0064597 Asph protein_coding protein_coding MGP_BALBcJ_T0064598.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 5916830 6126998 - MGP_BALBcJ_P0064598 Asph protein_coding protein_coding MGP_BALBcJ_T0064599.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 5916830 6126998 - MGP_BALBcJ_P0064599 Asph protein_coding protein_coding MGP_BALBcJ_T0064600.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6040549 6054132 - Asph protein_coding processed_transcript MGP_BALBcJ_T0064601.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6040948 6126998 - MGP_BALBcJ_P0064601 Asph protein_coding protein_coding MGP_BALBcJ_T0064602.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6040948 6101070 - MGP_BALBcJ_P0064602 Asph protein_coding protein_coding MGP_BALBcJ_T0064603.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6040948 6101070 - MGP_BALBcJ_P0064603 Asph protein_coding protein_coding MGP_BALBcJ_T0064604.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6040948 6101070 - MGP_BALBcJ_P0064604 Asph protein_coding protein_coding MGP_BALBcJ_T0064605.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6040948 6126998 - MGP_BALBcJ_P0064605 Asph protein_coding protein_coding MGP_BALBcJ_T0064606.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6061933 6096617 - Asph protein_coding processed_transcript MGP_BALBcJ_T0064607.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6065228 6101070 - MGP_BALBcJ_P0064607 Asph protein_coding protein_coding MGP_BALBcJ_T0064608.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6068226 6126998 - MGP_BALBcJ_P0064608 Asph protein_coding protein_coding MGP_BALBcJ_T0064609.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6078316 6101070 - MGP_BALBcJ_P0064609 Asph protein_coding protein_coding MGP_BALBcJ_T0064610.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6079103 6126998 - MGP_BALBcJ_P0064610 Asph protein_coding protein_coding MGP_BALBcJ_T0064611.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6086431 6126998 - MGP_BALBcJ_P0064611 Asph protein_coding protein_coding MGP_BALBcJ_T0064612.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6087957 6126998 - MGP_BALBcJ_P0064612 Asph protein_coding protein_coding MGP_BALBcJ_T0064613.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6088336 6127157 - MGP_BALBcJ_P0064613 Asph protein_coding protein_coding MGP_BALBcJ_T0064614.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6090526 6101070 - Asph protein_coding processed_transcript MGP_BALBcJ_T0064615.1 MGP_BALBcJ_G0028012.1 mouse_genomes_project 4 6126148 6126922 - Asph protein_coding processed_transcript MGP_BALBcJ_T0004457.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92020545 92036642 + Junos antisense antisense MGP_BALBcJ_T0004458.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92021980 92029939 + Junos antisense antisense MGP_BALBcJ_T0004459.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92022269 92127810 + Junos antisense antisense MGP_BALBcJ_T0004460.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92044776 92124999 + Junos antisense antisense MGP_BALBcJ_T0004461.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92044923 92105474 + Junos antisense antisense MGP_BALBcJ_T0004462.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92062627 92129756 + Junos antisense antisense MGP_BALBcJ_T0004463.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92067765 92134423 + Junos antisense antisense MGP_BALBcJ_T0004464.1 MGP_BALBcJ_G0003884.1 mouse_genomes_project 4 92091698 92135824 + Junos antisense antisense MGP_BALBcJ_T0014571.1 MGP_BALBcJ_G0012668.1 mouse_genomes_project 4 67008018 67009047 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004442.1 MGP_BALBcJ_G0003870.1 mouse_genomes_project 4 53973063 53977547 + Gm12530 antisense antisense MGP_BALBcJ_T0068118.1 MGP_BALBcJ_G0028828.1 mouse_genomes_project 4 127513131 127513879 - Gm853 protein_coding processed_transcript MGP_BALBcJ_T0068119.1 MGP_BALBcJ_G0028828.1 mouse_genomes_project 4 127513131 127526492 - MGP_BALBcJ_P0068119 Gm853 protein_coding protein_coding MGP_BALBcJ_T0067555.1 MGP_BALBcJ_G0028700.1 mouse_genomes_project 4 118019461 118035372 - MGP_BALBcJ_P0067555 Zfp69 protein_coding protein_coding MGP_BALBcJ_T0067556.1 MGP_BALBcJ_G0028700.1 mouse_genomes_project 4 118019677 118033103 - MGP_BALBcJ_P0067556 Zfp69 protein_coding protein_coding MGP_BALBcJ_T0067557.1 MGP_BALBcJ_G0028700.1 mouse_genomes_project 4 118020630 118031220 - MGP_BALBcJ_P0067557 Zfp69 protein_coding protein_coding MGP_BALBcJ_T0067558.1 MGP_BALBcJ_G0028700.1 mouse_genomes_project 4 118020631 118024027 - Zfp69 protein_coding retained_intron MGP_BALBcJ_T0098945.1 MGP_BALBcJ_G0036992.1 mouse_genomes_project 4 97101877 97103098 + Gm12701 sense_intronic sense_intronic MGP_BALBcJ_T0014629.1 MGP_BALBcJ_G0012726.1 mouse_genomes_project 4 88422098 88422659 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067962.1 MGP_BALBcJ_G0028801.1 mouse_genomes_project 4 126573738 126601350 - MGP_BALBcJ_P0067962 Rbbp4 protein_coding protein_coding MGP_BALBcJ_T0067963.1 MGP_BALBcJ_G0028801.1 mouse_genomes_project 4 126576154 126600624 - Rbbp4 protein_coding processed_transcript MGP_BALBcJ_T0067964.1 MGP_BALBcJ_G0028801.1 mouse_genomes_project 4 126590810 126601229 - Rbbp4 protein_coding retained_intron MGP_BALBcJ_T0067965.1 MGP_BALBcJ_G0028801.1 mouse_genomes_project 4 126594628 126601063 - MGP_BALBcJ_P0067965 Rbbp4 protein_coding protein_coding MGP_BALBcJ_T0066413.1 MGP_BALBcJ_G0028455.1 mouse_genomes_project 4 95739891 95804492 - MGP_BALBcJ_P0066413 Kank4 protein_coding protein_coding MGP_BALBcJ_T0066414.1 MGP_BALBcJ_G0028455.1 mouse_genomes_project 4 95741298 95756776 - Kank4 protein_coding processed_transcript MGP_BALBcJ_T0007949.1 MGP_BALBcJ_G0006489.1 mouse_genomes_project 4 128151166 128160586 - A930031H19Rik lincRNA lincRNA MGP_BALBcJ_T0007950.1 MGP_BALBcJ_G0006489.1 mouse_genomes_project 4 128151166 128156287 - A930031H19Rik lincRNA lincRNA MGP_BALBcJ_T0068619.1 MGP_BALBcJ_G0028939.1 mouse_genomes_project 4 133256545 133260952 - MGP_BALBcJ_P0068619 Lypla2 protein_coding protein_coding MGP_BALBcJ_T0068620.1 MGP_BALBcJ_G0028939.1 mouse_genomes_project 4 133256545 133260255 - MGP_BALBcJ_P0068620 Lypla2 protein_coding protein_coding MGP_BALBcJ_T0068621.1 MGP_BALBcJ_G0028939.1 mouse_genomes_project 4 133257022 133258792 - Lypla2 protein_coding retained_intron MGP_BALBcJ_T0068622.1 MGP_BALBcJ_G0028939.1 mouse_genomes_project 4 133257085 133260914 - Lypla2 protein_coding retained_intron MGP_BALBcJ_T0068623.1 MGP_BALBcJ_G0028939.1 mouse_genomes_project 4 133258971 133260929 - Lypla2 protein_coding retained_intron MGP_BALBcJ_T0067798.1 MGP_BALBcJ_G0028764.1 mouse_genomes_project 4 123704974 123749232 - MGP_BALBcJ_P0067798 Ago4 protein_coding protein_coding MGP_BALBcJ_T0067799.1 MGP_BALBcJ_G0028764.1 mouse_genomes_project 4 123731103 123732527 - Ago4 protein_coding processed_transcript MGP_BALBcJ_T0069325.1 MGP_BALBcJ_G0029120.1 mouse_genomes_project 4 147401926 147408641 - MGP_BALBcJ_P0069325 Rbp7 protein_coding protein_coding MGP_BALBcJ_T0069326.1 MGP_BALBcJ_G0029120.1 mouse_genomes_project 4 147401926 147407087 - MGP_BALBcJ_P0069326 Rbp7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069327.1 MGP_BALBcJ_G0029120.1 mouse_genomes_project 4 147401942 147408633 - Rbp7 protein_coding processed_transcript MGP_BALBcJ_T0099819.1 MGP_BALBcJ_G0037855.1 mouse_genomes_project 4 28644842 28644960 - Gm26254 snRNA snRNA MGP_BALBcJ_T0004576.1 MGP_BALBcJ_G0003970.1 mouse_genomes_project 4 147290714 147291159 + Ube4bos2 antisense antisense MGP_BALBcJ_T0007994.1 MGP_BALBcJ_G0006522.1 mouse_genomes_project 4 146239151 146248763 + Gm13206 lincRNA lincRNA MGP_BALBcJ_T0014753.1 MGP_BALBcJ_G0012850.1 mouse_genomes_project 4 126647497 126647833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066254.1 MGP_BALBcJ_G0028404.1 mouse_genomes_project 4 85570458 85571028 - MGP_BALBcJ_P0066254 Ifna14 protein_coding protein_coding MGP_BALBcJ_T0067489.1 MGP_BALBcJ_G0028684.1 mouse_genomes_project 4 116623358 116631735 - MGP_BALBcJ_P0067489 AA415398 protein_coding protein_coding MGP_BALBcJ_T0067490.1 MGP_BALBcJ_G0028684.1 mouse_genomes_project 4 116624486 116628207 - AA415398 protein_coding processed_transcript MGP_BALBcJ_T0067491.1 MGP_BALBcJ_G0028684.1 mouse_genomes_project 4 116624713 116632096 - AA415398 protein_coding processed_transcript MGP_BALBcJ_T0067492.1 MGP_BALBcJ_G0028684.1 mouse_genomes_project 4 116626505 116632495 - AA415398 protein_coding processed_transcript MGP_BALBcJ_T0068532.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132184666 132188746 + Rsrp1 protein_coding retained_intron MGP_BALBcJ_T0068533.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132184666 132188746 + MGP_BALBcJ_P0068533 Rsrp1 protein_coding protein_coding MGP_BALBcJ_T0068534.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132184667 132186498 + Rsrp1 protein_coding processed_transcript MGP_BALBcJ_T0068535.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132184700 132186408 + Rsrp1 protein_coding processed_transcript MGP_BALBcJ_T0068536.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132184719 132188447 + Rsrp1 protein_coding processed_transcript MGP_BALBcJ_T0068537.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132185534 132188447 + Rsrp1 protein_coding processed_transcript MGP_BALBcJ_T0068538.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132185784 132186430 + Rsrp1 protein_coding processed_transcript MGP_BALBcJ_T0068539.1 MGP_BALBcJ_G0028920.1 mouse_genomes_project 4 132186520 132188028 + Rsrp1 protein_coding processed_transcript MGP_BALBcJ_T0014723.1 MGP_BALBcJ_G0012820.1 mouse_genomes_project 4 118207654 118208365 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067654.1 MGP_BALBcJ_G0028729.1 mouse_genomes_project 4 121083546 121084065 - MGP_BALBcJ_P0067654 4930535I16Rik protein_coding protein_coding MGP_BALBcJ_T0068795.1 MGP_BALBcJ_G0028977.1 mouse_genomes_project 4 135686111 135699007 - MGP_BALBcJ_P0068795 Pink1 protein_coding protein_coding MGP_BALBcJ_T0068796.1 MGP_BALBcJ_G0028977.1 mouse_genomes_project 4 135686624 135699028 - MGP_BALBcJ_P0068796 Pink1 protein_coding protein_coding MGP_BALBcJ_T0067620.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120496967 120517235 - MGP_BALBcJ_P0067620 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067621.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120496967 120838266 - MGP_BALBcJ_P0067621 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067622.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497050 120838266 - MGP_BALBcJ_P0067622 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067623.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497050 120693930 - MGP_BALBcJ_P0067623 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067624.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497050 120519671 - MGP_BALBcJ_P0067624 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067625.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497050 120648664 - MGP_BALBcJ_P0067625 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067626.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497050 120513760 - MGP_BALBcJ_P0067626 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067627.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497050 120624649 - MGP_BALBcJ_P0067627 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067628.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497052 120676507 - MGP_BALBcJ_P0067628 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067629.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497052 120838266 - MGP_BALBcJ_P0067629 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067630.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120497054 120838266 - MGP_BALBcJ_P0067630 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067631.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120530366 120537776 - MGP_BALBcJ_P0067631 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067632.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120544561 120555134 - Macf1 protein_coding processed_transcript MGP_BALBcJ_T0067633.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120604476 120815631 - MGP_BALBcJ_P0067633 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067634.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120604476 120676647 - MGP_BALBcJ_P0067634 Macf1 protein_coding protein_coding MGP_BALBcJ_T0067635.1 MGP_BALBcJ_G0028723.1 mouse_genomes_project 4 120688042 120714178 - Macf1 protein_coding processed_transcript MGP_BALBcJ_T0010589.1 MGP_BALBcJ_G0008714.1 mouse_genomes_project 4 95642983 95643079 + Gm26154 miRNA miRNA MGP_BALBcJ_T0014553.1 MGP_BALBcJ_G0012650.1 mouse_genomes_project 4 55401948 55402365 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064967.1 MGP_BALBcJ_G0028102.1 mouse_genomes_project 4 31499928 31580407 - MGP_BALBcJ_P0064967 Zfp292 protein_coding protein_coding MGP_BALBcJ_T0064968.1 MGP_BALBcJ_G0028102.1 mouse_genomes_project 4 31499928 31580377 - MGP_BALBcJ_P0064968 Zfp292 protein_coding protein_coding MGP_BALBcJ_T0014793.1 MGP_BALBcJ_G0012890.1 mouse_genomes_project 4 141606310 141621718 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004470.1 MGP_BALBcJ_G0003888.1 mouse_genomes_project 4 96681561 96736050 - Gm12682 antisense antisense MGP_BALBcJ_T0064973.1 MGP_BALBcJ_G0028105.1 mouse_genomes_project 4 31652339 31857919 - MGP_BALBcJ_P0064973 Mob3b protein_coding protein_coding MGP_BALBcJ_T0064974.1 MGP_BALBcJ_G0028105.1 mouse_genomes_project 4 31783527 31857919 - Mob3b protein_coding processed_transcript MGP_BALBcJ_T0099822.1 MGP_BALBcJ_G0037858.1 mouse_genomes_project 4 36031196 36031360 - Gm25581 snRNA snRNA MGP_BALBcJ_T0068003.1 MGP_BALBcJ_G0028812.1 mouse_genomes_project 4 126876411 126885305 - MGP_BALBcJ_P0068003 Eif3i protein_coding protein_coding MGP_BALBcJ_T0068004.1 MGP_BALBcJ_G0028812.1 mouse_genomes_project 4 126877782 126880445 - Eif3i protein_coding retained_intron MGP_BALBcJ_T0068005.1 MGP_BALBcJ_G0028812.1 mouse_genomes_project 4 126877979 126885256 - MGP_BALBcJ_P0068005 Eif3i protein_coding protein_coding MGP_BALBcJ_T0068006.1 MGP_BALBcJ_G0028812.1 mouse_genomes_project 4 126879803 126885256 - Eif3i protein_coding processed_transcript MGP_BALBcJ_T0068007.1 MGP_BALBcJ_G0028812.1 mouse_genomes_project 4 126882864 126885273 - Eif3i protein_coding retained_intron MGP_BALBcJ_T0014605.1 MGP_BALBcJ_G0012702.1 mouse_genomes_project 4 78703000 78703737 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099873.1 MGP_BALBcJ_G0037909.1 mouse_genomes_project 4 123408724 123408821 - Gm25323 snRNA snRNA MGP_BALBcJ_T0014612.1 MGP_BALBcJ_G0012709.1 mouse_genomes_project 4 81855807 81856700 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068840.1 MGP_BALBcJ_G0028993.1 mouse_genomes_project 4 136450613 136465719 - MGP_BALBcJ_P0068840 Htr6 protein_coding protein_coding MGP_BALBcJ_T0068841.1 MGP_BALBcJ_G0028993.1 mouse_genomes_project 4 136450914 136464938 - MGP_BALBcJ_P0068841 Htr6 protein_coding protein_coding MGP_BALBcJ_T0007868.1 MGP_BALBcJ_G0006431.1 mouse_genomes_project 4 90485210 90701754 - Gm12649 lincRNA lincRNA MGP_BALBcJ_T0069578.1 MGP_BALBcJ_G0029165.1 mouse_genomes_project 4 151433879 151545902 - MGP_BALBcJ_P0069578 Ajap1 protein_coding protein_coding MGP_BALBcJ_T0069579.1 MGP_BALBcJ_G0029165.1 mouse_genomes_project 4 151434889 151545270 - MGP_BALBcJ_P0069579 Ajap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064642.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7647070 7702306 - MGP_BALBcJ_P0064642 Ints8 protein_coding protein_coding MGP_BALBcJ_T0064643.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7652223 7661075 - Ints8 protein_coding processed_transcript MGP_BALBcJ_T0064644.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7652494 7684135 - Ints8 protein_coding processed_transcript MGP_BALBcJ_T0064645.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7652496 7702306 - MGP_BALBcJ_P0064645 Ints8 protein_coding protein_coding MGP_BALBcJ_T0064646.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7652496 7702306 - MGP_BALBcJ_P0064646 Ints8 protein_coding protein_coding MGP_BALBcJ_T0064647.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7652497 7661642 - Ints8 protein_coding processed_transcript MGP_BALBcJ_T0064648.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7656867 7667792 - Ints8 protein_coding processed_transcript MGP_BALBcJ_T0064649.1 MGP_BALBcJ_G0028019.1 mouse_genomes_project 4 7681156 7684543 - Ints8 protein_coding processed_transcript MGP_BALBcJ_T0004571.1 MGP_BALBcJ_G0003967.1 mouse_genomes_project 4 146897143 146898581 - Gm13205 antisense antisense MGP_BALBcJ_T0069116.1 MGP_BALBcJ_G0029068.1 mouse_genomes_project 4 141900628 141957113 - MGP_BALBcJ_P0069116 protein_coding protein_coding MGP_BALBcJ_T0010598.1 MGP_BALBcJ_G0008723.1 mouse_genomes_project 4 117856120 117856209 - Mir30c-1 miRNA miRNA MGP_BALBcJ_T0066509.1 MGP_BALBcJ_G0028479.1 mouse_genomes_project 4 98903705 98906559 + MGP_BALBcJ_P0066509 protein_coding protein_coding MGP_BALBcJ_T0011557.1 MGP_BALBcJ_G0009682.1 mouse_genomes_project 4 106182914 106183188 - Gm23743 misc_RNA misc_RNA MGP_BALBcJ_T0004476.1 MGP_BALBcJ_G0003894.1 mouse_genomes_project 4 104015718 104020246 - Gm12786 antisense antisense MGP_BALBcJ_T0014523.1 MGP_BALBcJ_G0012620.1 mouse_genomes_project 4 47998649 47999006 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007789.1 MGP_BALBcJ_G0006363.1 mouse_genomes_project 4 19770473 19902989 + Gm11884 lincRNA lincRNA MGP_BALBcJ_T0067535.1 MGP_BALBcJ_G0028695.1 mouse_genomes_project 4 117750275 117751524 + MGP_BALBcJ_P0067535 Cited4 protein_coding protein_coding MGP_BALBcJ_T0014786.1 MGP_BALBcJ_G0012883.1 mouse_genomes_project 4 140738149 140739463 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068612.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133251838 133256500 + MGP_BALBcJ_P0068612 Gale protein_coding protein_coding MGP_BALBcJ_T0068613.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133251868 133253741 + MGP_BALBcJ_P0068613 Gale protein_coding protein_coding MGP_BALBcJ_T0068614.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133251871 133254977 + Gale protein_coding retained_intron MGP_BALBcJ_T0068615.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133251928 133253731 + MGP_BALBcJ_P0068615 Gale protein_coding protein_coding MGP_BALBcJ_T0068616.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133253276 133256500 + MGP_BALBcJ_P0068616 Gale protein_coding protein_coding MGP_BALBcJ_T0068617.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133253306 133255031 + Gale protein_coding retained_intron MGP_BALBcJ_T0068618.1 MGP_BALBcJ_G0028938.1 mouse_genomes_project 4 133253730 133256025 + Gale protein_coding retained_intron MGP_BALBcJ_T0014391.1 MGP_BALBcJ_G0012488.1 mouse_genomes_project 4 7849573 7850552 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014622.1 MGP_BALBcJ_G0012719.1 mouse_genomes_project 4 86473429 86476373 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014474.1 MGP_BALBcJ_G0012571.1 mouse_genomes_project 4 29623261 29623606 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067442.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116303879 116320132 + MGP_BALBcJ_P0067442 P3h1 protein_coding protein_coding MGP_BALBcJ_T0067443.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116303903 116320135 + MGP_BALBcJ_P0067443 P3h1 protein_coding protein_coding MGP_BALBcJ_T0067444.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116303910 116319527 + P3h1 protein_coding processed_transcript MGP_BALBcJ_T0067445.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116303910 116320132 + MGP_BALBcJ_P0067445 P3h1 protein_coding protein_coding MGP_BALBcJ_T0067446.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116303918 116319529 + MGP_BALBcJ_P0067446 P3h1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067447.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116303954 116319535 + MGP_BALBcJ_P0067447 P3h1 protein_coding protein_coding MGP_BALBcJ_T0067448.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116304764 116307872 + P3h1 protein_coding processed_transcript MGP_BALBcJ_T0067449.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116306308 116312648 + P3h1 protein_coding processed_transcript MGP_BALBcJ_T0067450.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116308881 116315302 + P3h1 protein_coding processed_transcript MGP_BALBcJ_T0067451.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116316182 116319293 + P3h1 protein_coding processed_transcript MGP_BALBcJ_T0067452.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116317798 116319532 + P3h1 protein_coding processed_transcript MGP_BALBcJ_T0067453.1 MGP_BALBcJ_G0028676.1 mouse_genomes_project 4 116318021 116319214 + P3h1 protein_coding retained_intron MGP_BALBcJ_T0065666.1 MGP_BALBcJ_G0028255.1 mouse_genomes_project 4 45377998 45459007 + MGP_BALBcJ_P0065666 Tmeff1 protein_coding protein_coding MGP_BALBcJ_T0065667.1 MGP_BALBcJ_G0028255.1 mouse_genomes_project 4 45378189 45457961 + MGP_BALBcJ_P0065667 Tmeff1 protein_coding protein_coding MGP_BALBcJ_T0065668.1 MGP_BALBcJ_G0028255.1 mouse_genomes_project 4 45378375 45458346 + MGP_BALBcJ_P0065668 Tmeff1 protein_coding protein_coding MGP_BALBcJ_T0065669.1 MGP_BALBcJ_G0028255.1 mouse_genomes_project 4 45430867 45456115 + MGP_BALBcJ_P0065669 Tmeff1 protein_coding protein_coding MGP_BALBcJ_T0014646.1 MGP_BALBcJ_G0012743.1 mouse_genomes_project 4 95215792 95216338 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014432.1 MGP_BALBcJ_G0012529.1 mouse_genomes_project 4 18646396 18646795 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067737.1 MGP_BALBcJ_G0028753.1 mouse_genomes_project 4 123306324 123346497 + MGP_BALBcJ_P0067737 Stk40 protein_coding protein_coding MGP_BALBcJ_T0067738.1 MGP_BALBcJ_G0028753.1 mouse_genomes_project 4 123306339 123346498 + MGP_BALBcJ_P0067738 Stk40 protein_coding protein_coding MGP_BALBcJ_T0067739.1 MGP_BALBcJ_G0028753.1 mouse_genomes_project 4 123306368 123330600 + MGP_BALBcJ_P0067739 Stk40 protein_coding protein_coding MGP_BALBcJ_T0067740.1 MGP_BALBcJ_G0028753.1 mouse_genomes_project 4 123306402 123321986 + Stk40 protein_coding processed_transcript MGP_BALBcJ_T0067741.1 MGP_BALBcJ_G0028753.1 mouse_genomes_project 4 123322559 123334445 + MGP_BALBcJ_P0067741 Stk40 protein_coding protein_coding MGP_BALBcJ_T0067742.1 MGP_BALBcJ_G0028753.1 mouse_genomes_project 4 123334295 123338273 + Stk40 protein_coding processed_transcript MGP_BALBcJ_T0099848.1 MGP_BALBcJ_G0037884.1 mouse_genomes_project 4 92485874 92486078 + Gm25004 snRNA snRNA MGP_BALBcJ_T0014707.1 MGP_BALBcJ_G0012804.1 mouse_genomes_project 4 114048901 114049541 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007843.1 MGP_BALBcJ_G0006410.1 mouse_genomes_project 4 61218585 61241472 - Gm11217 lincRNA lincRNA MGP_BALBcJ_T0014487.1 MGP_BALBcJ_G0012584.1 mouse_genomes_project 4 32691846 32692788 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065976.1 MGP_BALBcJ_G0028348.1 mouse_genomes_project 4 60318934 60355923 - MGP_BALBcJ_P0065976 Akna protein_coding protein_coding MGP_BALBcJ_T0065977.1 MGP_BALBcJ_G0028348.1 mouse_genomes_project 4 60332459 60333739 - Akna protein_coding processed_transcript MGP_BALBcJ_T0067001.1 MGP_BALBcJ_G0028573.1 mouse_genomes_project 4 111910698 111911565 - MGP_BALBcJ_P0067001 Foxe3 protein_coding protein_coding MGP_BALBcJ_T0004550.1 MGP_BALBcJ_G0003952.1 mouse_genomes_project 4 138566686 138569114 + 4921514A10Rik antisense antisense MGP_BALBcJ_T0069120.1 MGP_BALBcJ_G0029072.1 mouse_genomes_project 4 142128276 142145032 - MGP_BALBcJ_P0069120 Pramef12 protein_coding protein_coding MGP_BALBcJ_T0069121.1 MGP_BALBcJ_G0029072.1 mouse_genomes_project 4 142131655 142144985 - MGP_BALBcJ_P0069121 Pramef12 protein_coding protein_coding MGP_BALBcJ_T0011552.1 MGP_BALBcJ_G0009677.1 mouse_genomes_project 4 86476947 86477096 + Gm27580 misc_RNA misc_RNA MGP_BALBcJ_T0066944.1 MGP_BALBcJ_G0028560.1 mouse_genomes_project 4 108414533 108460739 + MGP_BALBcJ_P0066944 Bend5 protein_coding protein_coding MGP_BALBcJ_T0066945.1 MGP_BALBcJ_G0028560.1 mouse_genomes_project 4 108414574 108433204 + Bend5 protein_coding processed_transcript MGP_BALBcJ_T0066946.1 MGP_BALBcJ_G0028560.1 mouse_genomes_project 4 108414615 108460361 + Bend5 protein_coding processed_transcript MGP_BALBcJ_T0066947.1 MGP_BALBcJ_G0028560.1 mouse_genomes_project 4 108414734 108420070 + Bend5 protein_coding processed_transcript MGP_BALBcJ_T0066948.1 MGP_BALBcJ_G0028560.1 mouse_genomes_project 4 108433154 108460737 + MGP_BALBcJ_P0066948 Bend5 protein_coding protein_coding MGP_BALBcJ_T0066949.1 MGP_BALBcJ_G0028560.1 mouse_genomes_project 4 108433276 108460368 + Bend5 protein_coding processed_transcript MGP_BALBcJ_T0065711.1 MGP_BALBcJ_G0028271.1 mouse_genomes_project 4 49399551 49415490 + MGP_BALBcJ_P0065711 Toporsl protein_coding protein_coding MGP_BALBcJ_T0065712.1 MGP_BALBcJ_G0028271.1 mouse_genomes_project 4 49410283 49415487 + MGP_BALBcJ_P0065712 Toporsl protein_coding protein_coding MGP_BALBcJ_T0065242.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39760402 39764418 - MGP_BALBcJ_P0065242 Stoml2 protein_coding protein_coding MGP_BALBcJ_T0065243.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39760738 39762546 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0065244.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39760754 39762623 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0065245.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39760941 39764164 - MGP_BALBcJ_P0065245 Stoml2 protein_coding protein_coding MGP_BALBcJ_T0065246.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39760953 39763302 - MGP_BALBcJ_P0065246 Stoml2 protein_coding protein_coding MGP_BALBcJ_T0065247.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39762272 39764158 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0065248.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39762305 39764078 - MGP_BALBcJ_P0065248 Stoml2 protein_coding protein_coding MGP_BALBcJ_T0065249.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39762323 39763208 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0065250.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39762481 39763309 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0065251.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39762749 39764066 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0065252.1 MGP_BALBcJ_G0028175.1 mouse_genomes_project 4 39763201 39764144 - Stoml2 protein_coding processed_transcript MGP_BALBcJ_T0010637.1 MGP_BALBcJ_G0008762.1 mouse_genomes_project 4 151057834 151057929 - Gm25779 miRNA miRNA MGP_BALBcJ_T0014434.1 MGP_BALBcJ_G0012531.1 mouse_genomes_project 4 19068567 19069139 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018038.1 MGP_BALBcJ_G0015505.1 mouse_genomes_project 4 106585521 106669339 + Gm12811 processed_transcript processed_transcript MGP_BALBcJ_T0014676.1 MGP_BALBcJ_G0012773.1 mouse_genomes_project 4 103767723 103767937 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014726.1 MGP_BALBcJ_G0012823.1 mouse_genomes_project 4 118319128 118319501 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101094.1 MGP_BALBcJ_G0039130.1 mouse_genomes_project 4 309223 309360 - Gm22781 snoRNA snoRNA MGP_BALBcJ_T0066005.1 MGP_BALBcJ_G0028356.1 mouse_genomes_project 4 60916156 60977049 - MGP_BALBcJ_P0066005 Tnc protein_coding protein_coding MGP_BALBcJ_T0066006.1 MGP_BALBcJ_G0028356.1 mouse_genomes_project 4 60916156 61003608 - MGP_BALBcJ_P0066006 Tnc protein_coding protein_coding MGP_BALBcJ_T0066007.1 MGP_BALBcJ_G0028356.1 mouse_genomes_project 4 60916156 60977049 - MGP_BALBcJ_P0066007 Tnc protein_coding protein_coding MGP_BALBcJ_T0066008.1 MGP_BALBcJ_G0028356.1 mouse_genomes_project 4 60968992 60977049 - MGP_BALBcJ_P0066008 Tnc protein_coding protein_coding MGP_BALBcJ_T0014638.1 MGP_BALBcJ_G0012735.1 mouse_genomes_project 4 91387720 91388308 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014799.1 MGP_BALBcJ_G0012896.1 mouse_genomes_project 4 143243713 143244035 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066599.1 MGP_BALBcJ_G0028497.1 mouse_genomes_project 4 102156701 102232729 + MGP_BALBcJ_P0066599 Plpp3 protein_coding protein_coding MGP_BALBcJ_T0067660.1 MGP_BALBcJ_G0028732.1 mouse_genomes_project 4 121848482 121864372 - MGP_BALBcJ_P0067660 Utp11l protein_coding protein_coding MGP_BALBcJ_T0067661.1 MGP_BALBcJ_G0028732.1 mouse_genomes_project 4 121849107 121864306 - Utp11l protein_coding processed_transcript MGP_BALBcJ_T0014472.1 MGP_BALBcJ_G0012569.1 mouse_genomes_project 4 29313654 29313814 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064509.1 MGP_BALBcJ_G0027993.1 mouse_genomes_project 4 141559 304016 + MGP_BALBcJ_P0064509 protein_coding protein_coding MGP_BALBcJ_T0064510.1 MGP_BALBcJ_G0027993.1 mouse_genomes_project 4 141571 304015 + MGP_BALBcJ_P0064510 protein_coding protein_coding MGP_BALBcJ_T0064511.1 MGP_BALBcJ_G0027993.1 mouse_genomes_project 4 141574 213550 + protein_coding processed_transcript MGP_BALBcJ_T0102540.1 MGP_BALBcJ_G0040356.1 mouse_genomes_project 4 118570641 118573287 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004399.1 MGP_BALBcJ_G0003836.1 mouse_genomes_project 4 2833518 2843644 - antisense antisense MGP_BALBcJ_T0004400.1 MGP_BALBcJ_G0003836.1 mouse_genomes_project 4 2836263 2843644 - antisense antisense MGP_BALBcJ_T0018050.1 MGP_BALBcJ_G0015513.1 mouse_genomes_project 4 121907862 121923127 - Gm12915 processed_transcript processed_transcript MGP_BALBcJ_T0066329.1 MGP_BALBcJ_G0028437.1 mouse_genomes_project 4 92018046 92021234 - MGP_BALBcJ_P0066329 Jun protein_coding protein_coding MGP_BALBcJ_T0099861.1 MGP_BALBcJ_G0037897.1 mouse_genomes_project 4 111828209 111828342 - Gm23230 snRNA snRNA MGP_BALBcJ_T0101121.1 MGP_BALBcJ_G0039157.1 mouse_genomes_project 4 47113372 47113504 + Gm25485 snoRNA snoRNA MGP_BALBcJ_T0007802.1 MGP_BALBcJ_G0006376.1 mouse_genomes_project 4 37231851 37274500 - 4933428C19Rik lincRNA lincRNA MGP_BALBcJ_T0007824.1 MGP_BALBcJ_G0006394.1 mouse_genomes_project 4 51926711 52073877 - Gm12514 lincRNA lincRNA MGP_BALBcJ_T0007825.1 MGP_BALBcJ_G0006394.1 mouse_genomes_project 4 51926948 51931006 - Gm12514 lincRNA lincRNA MGP_BALBcJ_T0065619.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 43986363 44091250 + MGP_BALBcJ_P0065619 Col15a1 protein_coding protein_coding MGP_BALBcJ_T0065620.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 43986363 44091246 + MGP_BALBcJ_P0065620 Col15a1 protein_coding protein_coding MGP_BALBcJ_T0065621.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44011611 44023530 + Col15a1 protein_coding processed_transcript MGP_BALBcJ_T0065622.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44036569 44040434 + Col15a1 protein_coding processed_transcript MGP_BALBcJ_T0065623.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44036890 44040623 + Col15a1 protein_coding processed_transcript MGP_BALBcJ_T0065624.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44066189 44071355 + MGP_BALBcJ_P0065624 Col15a1 protein_coding protein_coding MGP_BALBcJ_T0065625.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44066201 44091250 + MGP_BALBcJ_P0065625 Col15a1 protein_coding protein_coding MGP_BALBcJ_T0065626.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44066419 44077375 + MGP_BALBcJ_P0065626 Col15a1 protein_coding protein_coding MGP_BALBcJ_T0065627.1 MGP_BALBcJ_G0028245.1 mouse_genomes_project 4 44081804 44091245 + MGP_BALBcJ_P0065627 Col15a1 protein_coding protein_coding MGP_BALBcJ_T0065236.1 MGP_BALBcJ_G0028174.1 mouse_genomes_project 4 39750346 39757796 - MGP_BALBcJ_P0065236 Pigo protein_coding protein_coding MGP_BALBcJ_T0065237.1 MGP_BALBcJ_G0028174.1 mouse_genomes_project 4 39750346 39758535 - MGP_BALBcJ_P0065237 Pigo protein_coding protein_coding MGP_BALBcJ_T0065238.1 MGP_BALBcJ_G0028174.1 mouse_genomes_project 4 39750346 39758472 - MGP_BALBcJ_P0065238 Pigo protein_coding protein_coding MGP_BALBcJ_T0065239.1 MGP_BALBcJ_G0028174.1 mouse_genomes_project 4 39750618 39752418 - Pigo protein_coding processed_transcript MGP_BALBcJ_T0065240.1 MGP_BALBcJ_G0028174.1 mouse_genomes_project 4 39750620 39758226 - MGP_BALBcJ_P0065240 Pigo protein_coding unknown_likely_coding MGP_BALBcJ_T0065241.1 MGP_BALBcJ_G0028174.1 mouse_genomes_project 4 39757418 39758183 - Pigo protein_coding processed_transcript MGP_BALBcJ_T0014422.1 MGP_BALBcJ_G0012519.1 mouse_genomes_project 4 14981007 14983117 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069622.1 MGP_BALBcJ_G0029173.1 mouse_genomes_project 4 152213105 152229440 + MGP_BALBcJ_P0069622 Wrap73 protein_coding protein_coding MGP_BALBcJ_T0069623.1 MGP_BALBcJ_G0029173.1 mouse_genomes_project 4 152213142 152229440 + Wrap73 protein_coding processed_transcript MGP_BALBcJ_T0069624.1 MGP_BALBcJ_G0029173.1 mouse_genomes_project 4 152224479 152227904 + MGP_BALBcJ_P0069624 Wrap73 protein_coding protein_coding MGP_BALBcJ_T0069625.1 MGP_BALBcJ_G0029173.1 mouse_genomes_project 4 152227838 152240293 + Wrap73 protein_coding processed_transcript MGP_BALBcJ_T0065412.1 MGP_BALBcJ_G0028198.1 mouse_genomes_project 4 40428472 40434283 - MGP_BALBcJ_P0065412 Olfr70 protein_coding protein_coding MGP_BALBcJ_T0069380.1 MGP_BALBcJ_G0029131.1 mouse_genomes_project 4 148096820 148121708 + MGP_BALBcJ_P0069380 Slc2a5 protein_coding protein_coding MGP_BALBcJ_T0069381.1 MGP_BALBcJ_G0029131.1 mouse_genomes_project 4 148106448 148117540 + Slc2a5 protein_coding processed_transcript MGP_BALBcJ_T0069382.1 MGP_BALBcJ_G0029131.1 mouse_genomes_project 4 148116852 148119753 + Slc2a5 protein_coding retained_intron MGP_BALBcJ_T0069383.1 MGP_BALBcJ_G0029131.1 mouse_genomes_project 4 148117053 148120338 + Slc2a5 protein_coding processed_transcript MGP_BALBcJ_T0007809.1 MGP_BALBcJ_G0006383.1 mouse_genomes_project 4 42406654 42409024 + lincRNA lincRNA MGP_BALBcJ_T0014807.1 MGP_BALBcJ_G0012904.1 mouse_genomes_project 4 147456177 147456553 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068037.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126904086 126905250 - Ccdc28b protein_coding processed_transcript MGP_BALBcJ_T0068038.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126904086 126908582 - MGP_BALBcJ_P0068038 Ccdc28b protein_coding protein_coding MGP_BALBcJ_T0068039.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126904087 126905573 - Ccdc28b protein_coding retained_intron MGP_BALBcJ_T0068040.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126904088 126906079 - Ccdc28b protein_coding processed_transcript MGP_BALBcJ_T0068041.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126904088 126908472 - MGP_BALBcJ_P0068041 Ccdc28b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068042.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126905133 126908513 - MGP_BALBcJ_P0068042 Ccdc28b protein_coding protein_coding MGP_BALBcJ_T0068043.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126905406 126907360 - Ccdc28b protein_coding processed_transcript MGP_BALBcJ_T0068044.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126905660 126908521 - MGP_BALBcJ_P0068044 Ccdc28b protein_coding protein_coding MGP_BALBcJ_T0068045.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126906812 126908479 - Ccdc28b protein_coding retained_intron MGP_BALBcJ_T0068046.1 MGP_BALBcJ_G0028816.1 mouse_genomes_project 4 126907934 126908534 - Ccdc28b protein_coding retained_intron MGP_BALBcJ_T0065526.1 MGP_BALBcJ_G0028221.1 mouse_genomes_project 4 42065506 42069519 - MGP_BALBcJ_P0065526 Exosc3 protein_coding protein_coding MGP_BALBcJ_T0065527.1 MGP_BALBcJ_G0028221.1 mouse_genomes_project 4 42065687 42069226 - Exosc3 protein_coding processed_transcript MGP_BALBcJ_T0065528.1 MGP_BALBcJ_G0028221.1 mouse_genomes_project 4 42065847 42092297 - MGP_BALBcJ_P0065528 Exosc3 protein_coding protein_coding MGP_BALBcJ_T0065529.1 MGP_BALBcJ_G0028221.1 mouse_genomes_project 4 42066358 42069494 - Exosc3 protein_coding processed_transcript MGP_BALBcJ_T0099830.1 MGP_BALBcJ_G0037866.1 mouse_genomes_project 4 40824167 40824279 - Gm22706 snRNA snRNA MGP_BALBcJ_T0004557.1 MGP_BALBcJ_G0003957.1 mouse_genomes_project 4 139355268 139367218 + Fhad1os2 antisense antisense MGP_BALBcJ_T0066459.1 MGP_BALBcJ_G0028465.1 mouse_genomes_project 4 96852288 96854671 + MGP_BALBcJ_P0066459 Efcab7 protein_coding protein_coding MGP_BALBcJ_T0066460.1 MGP_BALBcJ_G0028465.1 mouse_genomes_project 4 96852530 96854671 + MGP_BALBcJ_P0066460 Efcab7 protein_coding protein_coding MGP_BALBcJ_T0066461.1 MGP_BALBcJ_G0028465.1 mouse_genomes_project 4 96852590 96854671 + MGP_BALBcJ_P0066461 Efcab7 protein_coding protein_coding MGP_BALBcJ_T0066462.1 MGP_BALBcJ_G0028465.1 mouse_genomes_project 4 96852605 96906036 + MGP_BALBcJ_P0066462 Efcab7 protein_coding unknown_likely_coding MGP_BALBcJ_T0066463.1 MGP_BALBcJ_G0028465.1 mouse_genomes_project 4 96854484 96906036 + MGP_BALBcJ_P0066463 Efcab7 protein_coding protein_coding MGP_BALBcJ_T0066464.1 MGP_BALBcJ_G0028465.1 mouse_genomes_project 4 96902571 96906214 + MGP_BALBcJ_P0066464 Efcab7 protein_coding protein_coding MGP_BALBcJ_T0064774.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244189 18268419 + MGP_BALBcJ_P0064774 Ccnc protein_coding protein_coding MGP_BALBcJ_T0064775.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244214 18268419 + MGP_BALBcJ_P0064775 Ccnc protein_coding protein_coding MGP_BALBcJ_T0064776.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244214 18277794 + MGP_BALBcJ_P0064776 Ccnc protein_coding protein_coding MGP_BALBcJ_T0064777.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244229 18256468 + Ccnc protein_coding processed_transcript MGP_BALBcJ_T0064778.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244241 18265835 + Ccnc protein_coding processed_transcript MGP_BALBcJ_T0064779.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244243 18265835 + MGP_BALBcJ_P0064779 Ccnc protein_coding protein_coding MGP_BALBcJ_T0064780.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244246 18250478 + Ccnc protein_coding processed_transcript MGP_BALBcJ_T0064781.1 MGP_BALBcJ_G0028059.1 mouse_genomes_project 4 18244255 18266427 + Ccnc protein_coding processed_transcript MGP_BALBcJ_T0014771.1 MGP_BALBcJ_G0012868.1 mouse_genomes_project 4 133176051 133176265 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064666.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8024765 8059694 + Rad54b protein_coding processed_transcript MGP_BALBcJ_T0064667.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8024785 8051789 + MGP_BALBcJ_P0064667 Rad54b protein_coding protein_coding MGP_BALBcJ_T0064668.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8024792 8045002 + MGP_BALBcJ_P0064668 Rad54b protein_coding protein_coding MGP_BALBcJ_T0064669.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8024815 8082182 + MGP_BALBcJ_P0064669 Rad54b protein_coding protein_coding MGP_BALBcJ_T0064670.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8042687 8061832 + Rad54b protein_coding processed_transcript MGP_BALBcJ_T0064672.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8061931 8072521 + MGP_BALBcJ_P0064672 Rad54b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064673.1 MGP_BALBcJ_G0028023.1 mouse_genomes_project 4 8075751 8077158 + Rad54b protein_coding retained_intron MGP_BALBcJ_T0014396.1 MGP_BALBcJ_G0012493.1 mouse_genomes_project 4 8634824 8635230 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004468.1 MGP_BALBcJ_G0003886.1 mouse_genomes_project 4 95779627 95785240 + Kank4os antisense antisense MGP_BALBcJ_T0066510.1 MGP_BALBcJ_G0028480.1 mouse_genomes_project 4 98932448 98936939 - MGP_BALBcJ_P0066510 Gm12790 protein_coding protein_coding MGP_BALBcJ_T0067786.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123544641 123563988 - MGP_BALBcJ_P0067786 Ago3 protein_coding protein_coding MGP_BALBcJ_T0067787.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123546247 123644409 - MGP_BALBcJ_P0067787 Ago3 protein_coding protein_coding MGP_BALBcJ_T0067788.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123559313 123564570 - MGP_BALBcJ_P0067788 Ago3 protein_coding protein_coding MGP_BALBcJ_T0067789.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123588221 123618049 - Ago3 protein_coding processed_transcript MGP_BALBcJ_T0067790.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123588461 123644139 - MGP_BALBcJ_P0067790 Ago3 protein_coding unknown_likely_coding MGP_BALBcJ_T0067791.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123611711 123618090 - Ago3 protein_coding processed_transcript MGP_BALBcJ_T0067792.1 MGP_BALBcJ_G0028762.1 mouse_genomes_project 4 123621450 123644394 - Ago3 protein_coding processed_transcript MGP_BALBcJ_T0065546.1 MGP_BALBcJ_G0028226.1 mouse_genomes_project 4 42571755 42589631 - MGP_BALBcJ_P0065546 Igfbpl1 protein_coding protein_coding MGP_BALBcJ_T0065547.1 MGP_BALBcJ_G0028226.1 mouse_genomes_project 4 42575281 42578633 - Igfbpl1 protein_coding processed_transcript MGP_BALBcJ_T0069938.1 MGP_BALBcJ_G0029232.1 mouse_genomes_project 4 154304349 154311424 - MGP_BALBcJ_P0069938 Plekhn1 protein_coding protein_coding MGP_BALBcJ_T0069939.1 MGP_BALBcJ_G0029232.1 mouse_genomes_project 4 154304672 154311373 - MGP_BALBcJ_P0069939 Plekhn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0069240.1 MGP_BALBcJ_G0029109.1 mouse_genomes_project 4 146539237 146541101 + MGP_BALBcJ_P0069240 Masp2 protein_coding protein_coding MGP_BALBcJ_T0069241.1 MGP_BALBcJ_G0029109.1 mouse_genomes_project 4 146539247 146552551 + MGP_BALBcJ_P0069241 Masp2 protein_coding protein_coding MGP_BALBcJ_T0069242.1 MGP_BALBcJ_G0029109.1 mouse_genomes_project 4 146539251 146547249 + Masp2 protein_coding retained_intron MGP_BALBcJ_T0069243.1 MGP_BALBcJ_G0029109.1 mouse_genomes_project 4 146539258 146541101 + Masp2 protein_coding retained_intron MGP_BALBcJ_T0014559.1 MGP_BALBcJ_G0012656.1 mouse_genomes_project 4 60522216 60522463 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102510.1 MGP_BALBcJ_G0040326.1 mouse_genomes_project 4 58892525 58895580 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101118.1 MGP_BALBcJ_G0039154.1 mouse_genomes_project 4 43272210 43272341 + Gm22247 snoRNA snoRNA MGP_BALBcJ_T0004451.1 MGP_BALBcJ_G0003879.1 mouse_genomes_project 4 80313224 80329626 - Gm11413 antisense antisense MGP_BALBcJ_T0007955.1 MGP_BALBcJ_G0006493.1 mouse_genomes_project 4 129207417 129208201 + Gm13063 lincRNA lincRNA MGP_BALBcJ_T0099828.1 MGP_BALBcJ_G0037864.1 mouse_genomes_project 4 38125061 38125165 - Gm26084 snRNA snRNA MGP_BALBcJ_T0010595.1 MGP_BALBcJ_G0008720.1 mouse_genomes_project 4 114615347 114615421 + Gm25559 miRNA miRNA MGP_BALBcJ_T0068967.1 MGP_BALBcJ_G0029021.1 mouse_genomes_project 4 138538130 138563787 + MGP_BALBcJ_P0068967 Spata21 protein_coding protein_coding MGP_BALBcJ_T0068968.1 MGP_BALBcJ_G0029021.1 mouse_genomes_project 4 138555017 138562573 + Spata21 protein_coding retained_intron MGP_BALBcJ_T0065894.1 MGP_BALBcJ_G0028322.1 mouse_genomes_project 4 56807272 56811074 - MGP_BALBcJ_P0065894 Mup4 protein_coding unknown_likely_coding MGP_BALBcJ_T0101173.1 MGP_BALBcJ_G0039209.1 mouse_genomes_project 4 129475290 129475426 + Snora16a snoRNA snoRNA MGP_BALBcJ_T0067484.1 MGP_BALBcJ_G0028682.1 mouse_genomes_project 4 116506064 116537211 + MGP_BALBcJ_P0067484 Zmynd12 protein_coding protein_coding MGP_BALBcJ_T0067485.1 MGP_BALBcJ_G0028682.1 mouse_genomes_project 4 116506122 116533541 + Zmynd12 protein_coding processed_transcript MGP_BALBcJ_T0067486.1 MGP_BALBcJ_G0028682.1 mouse_genomes_project 4 116527994 116552447 + Zmynd12 protein_coding processed_transcript MGP_BALBcJ_T0067111.1 MGP_BALBcJ_G0028602.1 mouse_genomes_project 4 113157887 113170091 - MGP_BALBcJ_P0067111 Lurap1 protein_coding protein_coding MGP_BALBcJ_T0067114.1 MGP_BALBcJ_G0028602.1 mouse_genomes_project 4 113163001 113176842 - Lurap1 protein_coding processed_transcript MGP_BALBcJ_T0014797.1 MGP_BALBcJ_G0012894.1 mouse_genomes_project 4 142542506 142543449 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007806.1 MGP_BALBcJ_G0006380.1 mouse_genomes_project 4 39779304 39786297 + Gm26881 lincRNA lincRNA MGP_BALBcJ_T0098947.1 MGP_BALBcJ_G0036994.1 mouse_genomes_project 4 127907480 127911315 + Gm12971 sense_intronic sense_intronic MGP_BALBcJ_T0066694.1 MGP_BALBcJ_G0028517.1 mouse_genomes_project 4 104236956 104257344 - MGP_BALBcJ_P0066694 Lrrc42 protein_coding protein_coding MGP_BALBcJ_T0066695.1 MGP_BALBcJ_G0028517.1 mouse_genomes_project 4 104236959 104247343 - Lrrc42 protein_coding retained_intron MGP_BALBcJ_T0066696.1 MGP_BALBcJ_G0028517.1 mouse_genomes_project 4 104237201 104239423 - Lrrc42 protein_coding retained_intron MGP_BALBcJ_T0066697.1 MGP_BALBcJ_G0028517.1 mouse_genomes_project 4 104237381 104243569 - MGP_BALBcJ_P0066697 Lrrc42 protein_coding protein_coding MGP_BALBcJ_T0066698.1 MGP_BALBcJ_G0028517.1 mouse_genomes_project 4 104251224 104256972 - MGP_BALBcJ_P0066698 Lrrc42 protein_coding protein_coding MGP_BALBcJ_T0004454.1 MGP_BALBcJ_G0003882.1 mouse_genomes_project 4 85736822 85742704 - Gm13274 antisense antisense MGP_BALBcJ_T0004455.1 MGP_BALBcJ_G0003882.1 mouse_genomes_project 4 85736915 85742703 - Gm13274 antisense antisense MGP_BALBcJ_T0065591.1 MGP_BALBcJ_G0028237.1 mouse_genomes_project 4 43228232 43250323 + MGP_BALBcJ_P0065591 Anp32b protein_coding protein_coding MGP_BALBcJ_T0099842.1 MGP_BALBcJ_G0037878.1 mouse_genomes_project 4 80218935 80219042 - Gm23412 snRNA snRNA MGP_BALBcJ_T0011547.1 MGP_BALBcJ_G0009672.1 mouse_genomes_project 4 51286832 51287074 + Gm25687 misc_RNA misc_RNA MGP_BALBcJ_T0004422.1 MGP_BALBcJ_G0003853.1 mouse_genomes_project 4 38298326 38299848 + Fam219aos antisense antisense MGP_BALBcJ_T0004584.1 MGP_BALBcJ_G0003976.1 mouse_genomes_project 4 148553909 148555555 - Gm13091 antisense antisense MGP_BALBcJ_T0004515.1 MGP_BALBcJ_G0003923.1 mouse_genomes_project 4 122068170 122072063 - 1700125G02Rik antisense antisense MGP_BALBcJ_T0102519.1 MGP_BALBcJ_G0040335.1 mouse_genomes_project 4 85692754 85693262 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014555.1 MGP_BALBcJ_G0012652.1 mouse_genomes_project 4 56200676 56201396 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014378.1 MGP_BALBcJ_G0012475.1 mouse_genomes_project 4 3548273 3548741 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065657.1 MGP_BALBcJ_G0028253.1 mouse_genomes_project 4 45225284 45264753 - MGP_BALBcJ_P0065657 Tex10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065658.1 MGP_BALBcJ_G0028253.1 mouse_genomes_project 4 45225284 45269059 - MGP_BALBcJ_P0065658 Tex10 protein_coding protein_coding MGP_BALBcJ_T0065659.1 MGP_BALBcJ_G0028253.1 mouse_genomes_project 4 45225382 45269022 - MGP_BALBcJ_P0065659 Tex10 protein_coding protein_coding MGP_BALBcJ_T0065660.1 MGP_BALBcJ_G0028253.1 mouse_genomes_project 4 45254028 45255163 - Tex10 protein_coding retained_intron MGP_BALBcJ_T0065661.1 MGP_BALBcJ_G0028253.1 mouse_genomes_project 4 45263535 45265825 - Tex10 protein_coding processed_transcript MGP_BALBcJ_T0065662.1 MGP_BALBcJ_G0028253.1 mouse_genomes_project 4 45265037 45268943 - Tex10 protein_coding retained_intron MGP_BALBcJ_T0007764.1 MGP_BALBcJ_G0006344.1 mouse_genomes_project 4 141561 155563 - Gm26857 lincRNA lincRNA MGP_BALBcJ_T0004511.1 MGP_BALBcJ_G0003920.1 mouse_genomes_project 4 120997161 121027998 - 1700121C08Rik antisense antisense MGP_BALBcJ_T0066368.1 MGP_BALBcJ_G0028445.1 mouse_genomes_project 4 93482616 93520886 - MGP_BALBcJ_P0066368 Cyp2j6 protein_coding protein_coding MGP_BALBcJ_T0101149.1 MGP_BALBcJ_G0039185.1 mouse_genomes_project 4 91479892 91479993 + Gm22804 snoRNA snoRNA MGP_BALBcJ_T0068842.1 MGP_BALBcJ_G0028994.1 mouse_genomes_project 4 136473615 136484280 - MGP_BALBcJ_P0068842 Nbl1 protein_coding protein_coding MGP_BALBcJ_T0068843.1 MGP_BALBcJ_G0028994.1 mouse_genomes_project 4 136474538 136483392 - Nbl1 protein_coding processed_transcript MGP_BALBcJ_T0068844.1 MGP_BALBcJ_G0028994.1 mouse_genomes_project 4 136483361 136484255 - Nbl1 protein_coding processed_transcript MGP_BALBcJ_T0004439.1 MGP_BALBcJ_G0003867.1 mouse_genomes_project 4 49234315 49243108 - Smc2os antisense antisense MGP_BALBcJ_T0065424.1 MGP_BALBcJ_G0028206.1 mouse_genomes_project 4 40696387 40718182 + MGP_BALBcJ_P0065424 Glipr2 protein_coding protein_coding MGP_BALBcJ_T0065425.1 MGP_BALBcJ_G0028206.1 mouse_genomes_project 4 40696678 40718182 + MGP_BALBcJ_P0065425 Glipr2 protein_coding protein_coding MGP_BALBcJ_T0014536.1 MGP_BALBcJ_G0012633.1 mouse_genomes_project 4 50610121 50610508 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069043.1 MGP_BALBcJ_G0029041.1 mouse_genomes_project 4 139237854 139269239 - MGP_BALBcJ_P0069043 Dnajc16 protein_coding protein_coding MGP_BALBcJ_T0069044.1 MGP_BALBcJ_G0029041.1 mouse_genomes_project 4 139247454 139252466 - Dnajc16 protein_coding processed_transcript MGP_BALBcJ_T0069045.1 MGP_BALBcJ_G0029041.1 mouse_genomes_project 4 139261415 139269279 - MGP_BALBcJ_P0069045 Dnajc16 protein_coding protein_coding MGP_BALBcJ_T0014604.1 MGP_BALBcJ_G0012701.1 mouse_genomes_project 4 78450837 78457312 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014756.1 MGP_BALBcJ_G0012853.1 mouse_genomes_project 4 129382296 129382691 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101130.1 MGP_BALBcJ_G0039166.1 mouse_genomes_project 4 53693993 53694125 - Gm25053 snoRNA snoRNA MGP_BALBcJ_T0014464.1 MGP_BALBcJ_G0012561.1 mouse_genomes_project 4 26109586 26110094 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010575.1 MGP_BALBcJ_G0008700.1 mouse_genomes_project 4 42147466 42147579 - miRNA miRNA MGP_BALBcJ_T0066366.1 MGP_BALBcJ_G0028443.1 mouse_genomes_project 4 93256772 93308588 - MGP_BALBcJ_P0066366 Cyp2j11 protein_coding protein_coding MGP_BALBcJ_T0066995.1 MGP_BALBcJ_G0028568.1 mouse_genomes_project 4 110213770 110284322 - protein_coding retained_intron MGP_BALBcJ_T0066678.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104133464 104179144 - MGP_BALBcJ_P0066678 Tceanc2 protein_coding protein_coding MGP_BALBcJ_T0066679.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104138953 104178963 - MGP_BALBcJ_P0066679 Tceanc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066680.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104139008 104178880 - Tceanc2 protein_coding processed_transcript MGP_BALBcJ_T0066681.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104139216 104179700 - MGP_BALBcJ_P0066681 Tceanc2 protein_coding protein_coding MGP_BALBcJ_T0066682.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104139260 104178879 - MGP_BALBcJ_P0066682 Tceanc2 protein_coding protein_coding MGP_BALBcJ_T0066683.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104139380 104179713 - MGP_BALBcJ_P0066683 Tceanc2 protein_coding protein_coding MGP_BALBcJ_T0066684.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104166075 104178448 - Tceanc2 protein_coding processed_transcript MGP_BALBcJ_T0066685.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104173603 104178805 - Tceanc2 protein_coding processed_transcript MGP_BALBcJ_T0066686.1 MGP_BALBcJ_G0028514.1 mouse_genomes_project 4 104177212 104178265 - Tceanc2 protein_coding processed_transcript MGP_BALBcJ_T0007804.1 MGP_BALBcJ_G0006378.1 mouse_genomes_project 4 38576707 38577113 + Gm21980 lincRNA lincRNA MGP_BALBcJ_T0014739.1 MGP_BALBcJ_G0012836.1 mouse_genomes_project 4 121092253 121092575 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102504.1 MGP_BALBcJ_G0040320.1 mouse_genomes_project 4 38891765 38893590 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014479.1 MGP_BALBcJ_G0012576.1 mouse_genomes_project 4 31079661 31080472 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065332.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40225507 40226600 - MGP_BALBcJ_P0065332 Arhgef39 protein_coding protein_coding MGP_BALBcJ_T0065333.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40225507 40229061 - MGP_BALBcJ_P0065333 Arhgef39 protein_coding protein_coding MGP_BALBcJ_T0065334.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40225511 40228985 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0065335.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40225513 40226579 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0065336.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40225889 40229027 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0065337.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40226186 40228974 - MGP_BALBcJ_P0065337 Arhgef39 protein_coding protein_coding MGP_BALBcJ_T0065338.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40226585 40228481 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0065339.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40226626 40228441 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0065340.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40227097 40228977 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0065341.1 MGP_BALBcJ_G0028185.1 mouse_genomes_project 4 40228512 40229027 - Arhgef39 protein_coding processed_transcript MGP_BALBcJ_T0068187.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082578 129096518 - MGP_BALBcJ_P0068187 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068188.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129096555 - Epb41 protein_coding processed_transcript MGP_BALBcJ_T0068189.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129235880 - Epb41 protein_coding processed_transcript MGP_BALBcJ_T0068190.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129127032 - MGP_BALBcJ_P0068190 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068191.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129235851 - MGP_BALBcJ_P0068191 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068192.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129235851 - MGP_BALBcJ_P0068192 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068193.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129166742 - MGP_BALBcJ_P0068193 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068194.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129127001 - MGP_BALBcJ_P0068194 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068195.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129166741 - MGP_BALBcJ_P0068195 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068196.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082580 129163098 - MGP_BALBcJ_P0068196 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068197.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082596 129232410 - MGP_BALBcJ_P0068197 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068198.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082596 129208318 - MGP_BALBcJ_P0068198 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068199.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129082596 129208318 - MGP_BALBcJ_P0068199 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068200.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129083296 129232410 - Epb41 protein_coding processed_transcript MGP_BALBcJ_T0068201.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129085677 129166735 - MGP_BALBcJ_P0068201 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068202.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129114195 129169945 - MGP_BALBcJ_P0068202 Epb41 protein_coding unknown_likely_coding MGP_BALBcJ_T0068203.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129116775 129208331 - MGP_BALBcJ_P0068203 Epb41 protein_coding protein_coding MGP_BALBcJ_T0068204.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129148704 129159608 - Epb41 protein_coding processed_transcript MGP_BALBcJ_T0068205.1 MGP_BALBcJ_G0028843.1 mouse_genomes_project 4 129163079 129235823 - Epb41 protein_coding processed_transcript MGP_BALBcJ_T0101117.1 MGP_BALBcJ_G0039153.1 mouse_genomes_project 4 41161653 41161780 - Gm24376 snoRNA snoRNA MGP_BALBcJ_T0066279.1 MGP_BALBcJ_G0028423.1 mouse_genomes_project 4 86359181 86363979 - MGP_BALBcJ_P0066279 Cdkn2b protein_coding protein_coding MGP_BALBcJ_T0004604.1 MGP_BALBcJ_G0003990.1 mouse_genomes_project 4 153931850 153932537 - Mxra8os antisense antisense MGP_BALBcJ_T0014733.1 MGP_BALBcJ_G0012830.1 mouse_genomes_project 4 120403556 120404310 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004421.1 MGP_BALBcJ_G0003852.1 mouse_genomes_project 4 37015491 37017046 + antisense antisense MGP_BALBcJ_T0099887.1 MGP_BALBcJ_G0037923.1 mouse_genomes_project 4 135968976 135969082 - Gm22961 snRNA snRNA MGP_BALBcJ_T0065735.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50454720 50525927 + MGP_BALBcJ_P0065735 Fsd1l protein_coding protein_coding MGP_BALBcJ_T0065736.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50454739 50475053 + Fsd1l protein_coding retained_intron MGP_BALBcJ_T0065737.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50454740 50471161 + Fsd1l protein_coding retained_intron MGP_BALBcJ_T0065738.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50454818 50520079 + MGP_BALBcJ_P0065738 Fsd1l protein_coding protein_coding MGP_BALBcJ_T0065739.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50454823 50520077 + MGP_BALBcJ_P0065739 Fsd1l protein_coding protein_coding MGP_BALBcJ_T0065740.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50454965 50483312 + MGP_BALBcJ_P0065740 Fsd1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065741.1 MGP_BALBcJ_G0028280.1 mouse_genomes_project 4 50466541 50525927 + MGP_BALBcJ_P0065741 Fsd1l protein_coding protein_coding MGP_BALBcJ_T0014642.1 MGP_BALBcJ_G0012739.1 mouse_genomes_project 4 92524054 92524383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014457.1 MGP_BALBcJ_G0012554.1 mouse_genomes_project 4 25073518 25073865 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102528.1 MGP_BALBcJ_G0040344.1 mouse_genomes_project 4 109675208 109676255 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014582.1 MGP_BALBcJ_G0012679.1 mouse_genomes_project 4 71148691 71150112 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010563.1 MGP_BALBcJ_G0008688.1 mouse_genomes_project 4 22377999 22378109 - Gm26067 miRNA miRNA MGP_BALBcJ_T0098950.1 MGP_BALBcJ_G0036997.1 mouse_genomes_project 4 150228198 150228566 + Gm13096 sense_intronic sense_intronic MGP_BALBcJ_T0014511.1 MGP_BALBcJ_G0012608.1 mouse_genomes_project 4 43016538 43017512 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065051.1 MGP_BALBcJ_G0028124.1 mouse_genomes_project 4 37868344 37873802 - MGP_BALBcJ_P0065051 Aqp3 protein_coding protein_coding MGP_BALBcJ_T0065052.1 MGP_BALBcJ_G0028124.1 mouse_genomes_project 4 37869400 37870067 - Aqp3 protein_coding retained_intron MGP_BALBcJ_T0014497.1 MGP_BALBcJ_G0012594.1 mouse_genomes_project 4 36648189 36649144 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014732.1 MGP_BALBcJ_G0012829.1 mouse_genomes_project 4 120035552 120035760 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067421.1 MGP_BALBcJ_G0028671.1 mouse_genomes_project 4 116238724 116243195 - MGP_BALBcJ_P0067421 Zfp691 protein_coding protein_coding MGP_BALBcJ_T0067422.1 MGP_BALBcJ_G0028671.1 mouse_genomes_project 4 116238724 116243534 - MGP_BALBcJ_P0067422 Zfp691 protein_coding protein_coding MGP_BALBcJ_T0067423.1 MGP_BALBcJ_G0028671.1 mouse_genomes_project 4 116238727 116243195 - MGP_BALBcJ_P0067423 Zfp691 protein_coding protein_coding MGP_BALBcJ_T0067424.1 MGP_BALBcJ_G0028671.1 mouse_genomes_project 4 116240210 116243195 - MGP_BALBcJ_P0067424 Zfp691 protein_coding protein_coding MGP_BALBcJ_T0014387.1 MGP_BALBcJ_G0012484.1 mouse_genomes_project 4 7252565 7253751 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065704.1 MGP_BALBcJ_G0028268.1 mouse_genomes_project 4 48024608 48036836 + MGP_BALBcJ_P0065704 Cylc2 protein_coding protein_coding MGP_BALBcJ_T0064867.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 28878945 29238364 + MGP_BALBcJ_P0064867 Bach2 protein_coding protein_coding MGP_BALBcJ_T0064868.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 28879091 29232952 + MGP_BALBcJ_P0064868 Bach2 protein_coding protein_coding MGP_BALBcJ_T0064869.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 28879218 29149792 + Bach2 protein_coding processed_transcript MGP_BALBcJ_T0064870.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 28887891 28958352 + Bach2 protein_coding processed_transcript MGP_BALBcJ_T0064871.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 29064765 29238368 + MGP_BALBcJ_P0064871 Bach2 protein_coding protein_coding MGP_BALBcJ_T0064872.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 29149660 29150782 + Bach2 protein_coding processed_transcript MGP_BALBcJ_T0064873.1 MGP_BALBcJ_G0028078.1 mouse_genomes_project 4 29226681 29231591 + Bach2 protein_coding processed_transcript MGP_BALBcJ_T0001407.1 MGP_BALBcJ_G0001329.1 mouse_genomes_project 4 41414069 41415637 + TEC TEC MGP_BALBcJ_T0001402.1 MGP_BALBcJ_G0001324.1 mouse_genomes_project 4 4915333 4923798 - TEC TEC MGP_BALBcJ_T0004469.1 MGP_BALBcJ_G0003887.1 mouse_genomes_project 4 96131959 96133837 + Gm12705 antisense antisense MGP_BALBcJ_T0004406.1 MGP_BALBcJ_G0003841.1 mouse_genomes_project 4 8077515 8081384 - Gm11832 antisense antisense MGP_BALBcJ_T0101125.1 MGP_BALBcJ_G0039161.1 mouse_genomes_project 4 52094876 52095091 - Gm25419 snoRNA snoRNA MGP_BALBcJ_T0068414.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131298493 131329834 + MGP_BALBcJ_P0068414 Aim1l protein_coding unknown_likely_coding MGP_BALBcJ_T0068415.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131303565 131310359 + MGP_BALBcJ_P0068415 Aim1l protein_coding protein_coding MGP_BALBcJ_T0068416.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131306037 131329931 + MGP_BALBcJ_P0068416 Aim1l protein_coding protein_coding MGP_BALBcJ_T0068417.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131316472 131320321 + Aim1l protein_coding processed_transcript MGP_BALBcJ_T0068418.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131316553 131324936 + MGP_BALBcJ_P0068418 Aim1l protein_coding protein_coding MGP_BALBcJ_T0068419.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131319946 131328526 + Aim1l protein_coding retained_intron MGP_BALBcJ_T0068420.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131319946 131329928 + Aim1l protein_coding retained_intron MGP_BALBcJ_T0068421.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131319949 131326933 + Aim1l protein_coding retained_intron MGP_BALBcJ_T0068422.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131319984 131326497 + Aim1l protein_coding retained_intron MGP_BALBcJ_T0068423.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131320070 131320523 + Aim1l protein_coding retained_intron MGP_BALBcJ_T0068425.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131328245 131329813 + Aim1l protein_coding retained_intron MGP_BALBcJ_T0068426.1 MGP_BALBcJ_G0028892.1 mouse_genomes_project 4 131328579 131329923 + Aim1l protein_coding processed_transcript MGP_BALBcJ_T0067709.1 MGP_BALBcJ_G0028745.1 mouse_genomes_project 4 122260396 122267723 + MGP_BALBcJ_P0067709 Snip1 protein_coding protein_coding MGP_BALBcJ_T0067710.1 MGP_BALBcJ_G0028745.1 mouse_genomes_project 4 122260426 122264982 + Snip1 protein_coding processed_transcript MGP_BALBcJ_T0069384.1 MGP_BALBcJ_G0029132.1 mouse_genomes_project 4 148126486 148148144 + MGP_BALBcJ_P0069384 Slc2a7 protein_coding protein_coding MGP_BALBcJ_T0069385.1 MGP_BALBcJ_G0029132.1 mouse_genomes_project 4 148135965 148136838 + Slc2a7 protein_coding retained_intron MGP_BALBcJ_T0010640.1 MGP_BALBcJ_G0008765.1 mouse_genomes_project 4 154140802 154140892 - Mir200a miRNA miRNA MGP_BALBcJ_T0067404.1 MGP_BALBcJ_G0028658.1 mouse_genomes_project 4 115741480 115742455 - MGP_BALBcJ_P0067404 Olfr1342 protein_coding protein_coding MGP_BALBcJ_T0066575.1 MGP_BALBcJ_G0028489.1 mouse_genomes_project 4 100229104 100283217 - MGP_BALBcJ_P0066575 4921539E11Rik protein_coding protein_coding MGP_BALBcJ_T0066576.1 MGP_BALBcJ_G0028489.1 mouse_genomes_project 4 100229104 100283217 - MGP_BALBcJ_P0066576 4921539E11Rik protein_coding protein_coding MGP_BALBcJ_T0066577.1 MGP_BALBcJ_G0028489.1 mouse_genomes_project 4 100233967 100283217 - MGP_BALBcJ_P0066577 4921539E11Rik protein_coding protein_coding MGP_BALBcJ_T0065197.1 MGP_BALBcJ_G0028168.1 mouse_genomes_project 4 39592953 39599153 - MGP_BALBcJ_P0065197 Fam205c protein_coding protein_coding MGP_BALBcJ_T0065198.1 MGP_BALBcJ_G0028168.1 mouse_genomes_project 4 39593152 39599145 - MGP_BALBcJ_P0065198 Fam205c protein_coding protein_coding MGP_BALBcJ_T0065199.1 MGP_BALBcJ_G0028168.1 mouse_genomes_project 4 39596449 39598671 - Fam205c protein_coding processed_transcript MGP_BALBcJ_T0065200.1 MGP_BALBcJ_G0028168.1 mouse_genomes_project 4 39596637 39599184 - Fam205c protein_coding processed_transcript MGP_BALBcJ_T0007850.1 MGP_BALBcJ_G0006417.1 mouse_genomes_project 4 79005901 79031538 - Gm11264 lincRNA lincRNA MGP_BALBcJ_T0065975.1 MGP_BALBcJ_G0028347.1 mouse_genomes_project 4 60314220 60317692 + MGP_BALBcJ_P0065975 Orm2 protein_coding protein_coding MGP_BALBcJ_T0102527.1 MGP_BALBcJ_G0040343.1 mouse_genomes_project 4 109602966 109619865 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007993.1 MGP_BALBcJ_G0006521.1 mouse_genomes_project 4 139791339 139830271 - Gm13052 lincRNA lincRNA MGP_BALBcJ_T0069129.1 MGP_BALBcJ_G0029080.1 mouse_genomes_project 4 142459005 142476488 - MGP_BALBcJ_P0069129 Gm13178 protein_coding protein_coding MGP_BALBcJ_T0069472.1 MGP_BALBcJ_G0029148.1 mouse_genomes_project 4 150029138 150038564 + MGP_BALBcJ_P0069472 Klhl21 protein_coding protein_coding MGP_BALBcJ_T0014389.1 MGP_BALBcJ_G0012486.1 mouse_genomes_project 4 7571980 7572262 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004472.1 MGP_BALBcJ_G0003890.1 mouse_genomes_project 4 99962286 99984652 - Gm12709 antisense antisense MGP_BALBcJ_T0010638.1 MGP_BALBcJ_G0008763.1 mouse_genomes_project 4 153880732 153880858 + Gm27743 miRNA miRNA MGP_BALBcJ_T0102522.1 MGP_BALBcJ_G0040338.1 mouse_genomes_project 4 93123035 93123214 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0018004.1 MGP_BALBcJ_G0015480.1 mouse_genomes_project 4 31921218 31934344 + Gm12367 processed_transcript processed_transcript MGP_BALBcJ_T0018005.1 MGP_BALBcJ_G0015480.1 mouse_genomes_project 4 31921236 31934442 + Gm12367 processed_transcript processed_transcript MGP_BALBcJ_T0018006.1 MGP_BALBcJ_G0015480.1 mouse_genomes_project 4 31921253 31960343 + Gm12367 processed_transcript processed_transcript MGP_BALBcJ_T0007936.1 MGP_BALBcJ_G0006481.1 mouse_genomes_project 4 126387326 126389146 + Gm15906 lincRNA lincRNA MGP_BALBcJ_T0018026.1 MGP_BALBcJ_G0015495.1 mouse_genomes_project 4 86452864 86499084 + Gm12610 processed_transcript processed_transcript MGP_BALBcJ_T0014717.1 MGP_BALBcJ_G0012814.1 mouse_genomes_project 4 116591270 116591952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014503.1 MGP_BALBcJ_G0012600.1 mouse_genomes_project 4 37944962 37945921 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066271.1 MGP_BALBcJ_G0028417.1 mouse_genomes_project 4 85859858 85860419 + MGP_BALBcJ_P0066271 Ifna4 protein_coding protein_coding MGP_BALBcJ_T0011538.1 MGP_BALBcJ_G0009663.1 mouse_genomes_project 4 29162942 29163209 + Gm24371 misc_RNA misc_RNA MGP_BALBcJ_T0099870.1 MGP_BALBcJ_G0037906.1 mouse_genomes_project 4 118170661 118170825 - Gm23540 snRNA snRNA MGP_BALBcJ_T0010593.1 MGP_BALBcJ_G0008718.1 mouse_genomes_project 4 105100405 105100498 + Mir6397 miRNA miRNA MGP_BALBcJ_T0066442.1 MGP_BALBcJ_G0028460.1 mouse_genomes_project 4 96219159 96286213 + MGP_BALBcJ_P0066442 Atg4c protein_coding protein_coding MGP_BALBcJ_T0066443.1 MGP_BALBcJ_G0028460.1 mouse_genomes_project 4 96219372 96286209 + MGP_BALBcJ_P0066443 Atg4c protein_coding protein_coding MGP_BALBcJ_T0066444.1 MGP_BALBcJ_G0028460.1 mouse_genomes_project 4 96243529 96251054 + Atg4c protein_coding processed_transcript MGP_BALBcJ_T0099851.1 MGP_BALBcJ_G0037887.1 mouse_genomes_project 4 95363481 95363571 - Gm24960 snRNA snRNA MGP_BALBcJ_T0069000.1 MGP_BALBcJ_G0029030.1 mouse_genomes_project 4 138883054 138887569 + MGP_BALBcJ_P0069000 Hspb7 protein_coding protein_coding MGP_BALBcJ_T0014533.1 MGP_BALBcJ_G0012630.1 mouse_genomes_project 4 49714592 49716642 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067986.1 MGP_BALBcJ_G0028808.1 mouse_genomes_project 4 126788921 126791325 + MGP_BALBcJ_P0067986 Marcksl1 protein_coding protein_coding MGP_BALBcJ_T0064578.1 MGP_BALBcJ_G0028008.1 mouse_genomes_project 4 4633289 4727630 - MGP_BALBcJ_P0064578 Car8 protein_coding protein_coding MGP_BALBcJ_T0014647.1 MGP_BALBcJ_G0012744.1 mouse_genomes_project 4 95252102 95252595 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007880.1 MGP_BALBcJ_G0006442.1 mouse_genomes_project 4 98296425 98306097 - E130102H24Rik lincRNA lincRNA MGP_BALBcJ_T0007882.1 MGP_BALBcJ_G0006442.1 mouse_genomes_project 4 98305890 98306584 - E130102H24Rik lincRNA lincRNA MGP_BALBcJ_T0066383.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94750657 94980120 + MGP_BALBcJ_P0066383 Nfia protein_coding protein_coding MGP_BALBcJ_T0066384.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94755390 95100343 + MGP_BALBcJ_P0066384 Nfia protein_coding protein_coding MGP_BALBcJ_T0066385.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94755408 95100346 + MGP_BALBcJ_P0066385 Nfia protein_coding protein_coding MGP_BALBcJ_T0066386.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94755585 95100343 + MGP_BALBcJ_P0066386 Nfia protein_coding protein_coding MGP_BALBcJ_T0066387.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94755601 95100343 + MGP_BALBcJ_P0066387 Nfia protein_coding protein_coding MGP_BALBcJ_T0066388.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94755616 95100343 + MGP_BALBcJ_P0066388 Nfia protein_coding protein_coding MGP_BALBcJ_T0066389.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94858428 95046505 + MGP_BALBcJ_P0066389 Nfia protein_coding protein_coding MGP_BALBcJ_T0066390.1 MGP_BALBcJ_G0028451.1 mouse_genomes_project 4 94889453 95022712 + Nfia protein_coding processed_transcript MGP_BALBcJ_T0004594.1 MGP_BALBcJ_G0003985.1 mouse_genomes_project 4 152934306 152939638 - Gm13112 antisense antisense MGP_BALBcJ_T0004595.1 MGP_BALBcJ_G0003985.1 mouse_genomes_project 4 152934883 152942161 - Gm13112 antisense antisense MGP_BALBcJ_T0101136.1 MGP_BALBcJ_G0039172.1 mouse_genomes_project 4 69833855 69833993 - Gm25653 snoRNA snoRNA MGP_BALBcJ_T0066141.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80390598 80425752 - MGP_BALBcJ_P0066141 Psip1 protein_coding protein_coding MGP_BALBcJ_T0066142.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80394169 80397682 - Psip1 protein_coding retained_intron MGP_BALBcJ_T0066143.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80399260 80403137 - MGP_BALBcJ_P0066143 Psip1 protein_coding protein_coding MGP_BALBcJ_T0066144.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80399260 80425746 - MGP_BALBcJ_P0066144 Psip1 protein_coding protein_coding MGP_BALBcJ_T0066145.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80399260 80425751 - MGP_BALBcJ_P0066145 Psip1 protein_coding protein_coding MGP_BALBcJ_T0066146.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80400219 80403216 - Psip1 protein_coding retained_intron MGP_BALBcJ_T0066148.1 MGP_BALBcJ_G0028385.1 mouse_genomes_project 4 80414486 80425477 - MGP_BALBcJ_P0066148 Psip1 protein_coding protein_coding MGP_BALBcJ_T0014706.1 MGP_BALBcJ_G0012803.1 mouse_genomes_project 4 113978981 113979784 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064635.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7639246 7641857 + Ccne2 protein_coding processed_transcript MGP_BALBcJ_T0064636.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7639249 7652788 + MGP_BALBcJ_P0064636 Ccne2 protein_coding protein_coding MGP_BALBcJ_T0064637.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7639604 7643051 + Ccne2 protein_coding processed_transcript MGP_BALBcJ_T0064638.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7639621 7652892 + MGP_BALBcJ_P0064638 Ccne2 protein_coding protein_coding MGP_BALBcJ_T0064639.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7639625 7652795 + MGP_BALBcJ_P0064639 Ccne2 protein_coding protein_coding MGP_BALBcJ_T0064640.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7639631 7642933 + Ccne2 protein_coding processed_transcript MGP_BALBcJ_T0064641.1 MGP_BALBcJ_G0028018.1 mouse_genomes_project 4 7640492 7641131 + Ccne2 protein_coding processed_transcript MGP_BALBcJ_T0064874.1 MGP_BALBcJ_G0028079.1 mouse_genomes_project 4 29252999 29255112 - MGP_BALBcJ_P0064874 Gja10 protein_coding protein_coding MGP_BALBcJ_T0014569.1 MGP_BALBcJ_G0012666.1 mouse_genomes_project 4 66808519 66809257 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001404.1 MGP_BALBcJ_G0001326.1 mouse_genomes_project 4 12860696 12861302 + TEC TEC MGP_BALBcJ_T0067668.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121913611 121973225 + MGP_BALBcJ_P0067668 Inpp5b protein_coding protein_coding MGP_BALBcJ_T0067669.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121913619 121923252 + MGP_BALBcJ_P0067669 Inpp5b protein_coding protein_coding MGP_BALBcJ_T0067670.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121913633 121973219 + MGP_BALBcJ_P0067670 Inpp5b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067671.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121913639 121923214 + MGP_BALBcJ_P0067671 Inpp5b protein_coding protein_coding MGP_BALBcJ_T0067672.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121940893 121953989 + Inpp5b protein_coding processed_transcript MGP_BALBcJ_T0067673.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121940999 121954042 + Inpp5b protein_coding processed_transcript MGP_BALBcJ_T0067674.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121966881 121969604 + Inpp5b protein_coding processed_transcript MGP_BALBcJ_T0067675.1 MGP_BALBcJ_G0028735.1 mouse_genomes_project 4 121971261 121972824 + Inpp5b protein_coding processed_transcript MGP_BALBcJ_T0064900.1 MGP_BALBcJ_G0028084.1 mouse_genomes_project 4 29623151 29623655 + MGP_BALBcJ_P0064900 protein_coding protein_coding MGP_BALBcJ_T0065769.1 MGP_BALBcJ_G0028291.1 mouse_genomes_project 4 53598522 53600803 + Fam206a protein_coding retained_intron MGP_BALBcJ_T0065770.1 MGP_BALBcJ_G0028291.1 mouse_genomes_project 4 53598526 53605779 + MGP_BALBcJ_P0065770 Fam206a protein_coding protein_coding MGP_BALBcJ_T0065771.1 MGP_BALBcJ_G0028291.1 mouse_genomes_project 4 53598529 53605779 + MGP_BALBcJ_P0065771 Fam206a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065772.1 MGP_BALBcJ_G0028291.1 mouse_genomes_project 4 53598795 53602125 + MGP_BALBcJ_P0065772 Fam206a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014382.1 MGP_BALBcJ_G0012479.1 mouse_genomes_project 4 5403012 5403410 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001405.1 MGP_BALBcJ_G0001327.1 mouse_genomes_project 4 18945290 18948913 + TEC TEC MGP_BALBcJ_T0064516.1 MGP_BALBcJ_G0027995.1 mouse_genomes_project 4 401216 402665 - MGP_BALBcJ_P0064516 Mos protein_coding protein_coding MGP_BALBcJ_T0099811.1 MGP_BALBcJ_G0037847.1 mouse_genomes_project 4 7727025 7727180 - Gm22940 snRNA snRNA MGP_BALBcJ_T0067172.1 MGP_BALBcJ_G0028613.1 mouse_genomes_project 4 113711643 113726924 + MGP_BALBcJ_P0067172 Prdx1 protein_coding protein_coding MGP_BALBcJ_T0067173.1 MGP_BALBcJ_G0028613.1 mouse_genomes_project 4 113711698 113713998 + Prdx1 protein_coding retained_intron MGP_BALBcJ_T0067174.1 MGP_BALBcJ_G0028613.1 mouse_genomes_project 4 113711698 113719936 + MGP_BALBcJ_P0067174 Prdx1 protein_coding protein_coding MGP_BALBcJ_T0067175.1 MGP_BALBcJ_G0028613.1 mouse_genomes_project 4 113711960 113719086 + MGP_BALBcJ_P0067175 Prdx1 protein_coding protein_coding MGP_BALBcJ_T0067176.1 MGP_BALBcJ_G0028613.1 mouse_genomes_project 4 113711986 113725377 + MGP_BALBcJ_P0067176 Prdx1 protein_coding protein_coding MGP_BALBcJ_T0067177.1 MGP_BALBcJ_G0028613.1 mouse_genomes_project 4 113713413 113725291 + MGP_BALBcJ_P0067177 Prdx1 protein_coding protein_coding MGP_BALBcJ_T0101168.1 MGP_BALBcJ_G0039204.1 mouse_genomes_project 4 127915266 127915349 + Gm24091 snoRNA snoRNA MGP_BALBcJ_T0014496.1 MGP_BALBcJ_G0012593.1 mouse_genomes_project 4 36606825 36607513 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068715.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134957635 134969705 + MGP_BALBcJ_P0068715 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068716.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134958020 135025231 + MGP_BALBcJ_P0068716 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068717.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134958087 134991380 + MGP_BALBcJ_P0068717 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068718.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134958087 135025231 + MGP_BALBcJ_P0068718 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068719.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134958108 134991380 + MGP_BALBcJ_P0068719 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068720.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134984616 134991380 + MGP_BALBcJ_P0068720 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068721.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134985856 134989471 + Usp48 protein_coding processed_transcript MGP_BALBcJ_T0068722.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134987300 134999742 + Usp48 protein_coding processed_transcript MGP_BALBcJ_T0068723.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134989471 135000176 + MGP_BALBcJ_P0068723 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068724.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134991251 135025237 + Usp48 protein_coding processed_transcript MGP_BALBcJ_T0068725.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134999915 135021963 + MGP_BALBcJ_P0068725 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068726.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 134999986 135004011 + MGP_BALBcJ_P0068726 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068727.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 135000390 135019632 + MGP_BALBcJ_P0068727 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068728.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 135010949 135021956 + MGP_BALBcJ_P0068728 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068729.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 135011034 135019466 + MGP_BALBcJ_P0068729 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068730.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 135016916 135023039 + MGP_BALBcJ_P0068730 Usp48 protein_coding protein_coding MGP_BALBcJ_T0068731.1 MGP_BALBcJ_G0028968.1 mouse_genomes_project 4 135024097 135025230 + Usp48 protein_coding processed_transcript MGP_BALBcJ_T0001406.1 MGP_BALBcJ_G0001328.1 mouse_genomes_project 4 38499400 38499878 - TEC TEC MGP_BALBcJ_T0004552.1 MGP_BALBcJ_G0003954.1 mouse_genomes_project 4 138860699 138872291 + Gm13075 antisense antisense MGP_BALBcJ_T0004553.1 MGP_BALBcJ_G0003954.1 mouse_genomes_project 4 138860727 138873467 + Gm13075 antisense antisense MGP_BALBcJ_T0067617.1 MGP_BALBcJ_G0028721.1 mouse_genomes_project 4 120458025 120490600 - MGP_BALBcJ_P0067617 Bmp8a protein_coding protein_coding MGP_BALBcJ_T0067618.1 MGP_BALBcJ_G0028721.1 mouse_genomes_project 4 120458025 120490151 - MGP_BALBcJ_P0067618 Bmp8a protein_coding protein_coding MGP_BALBcJ_T0068987.1 MGP_BALBcJ_G0029026.1 mouse_genomes_project 4 138760125 138788312 + MGP_BALBcJ_P0068987 Epha2 protein_coding protein_coding MGP_BALBcJ_T0068988.1 MGP_BALBcJ_G0029026.1 mouse_genomes_project 4 138761292 138767614 + Epha2 protein_coding processed_transcript MGP_BALBcJ_T0068989.1 MGP_BALBcJ_G0029026.1 mouse_genomes_project 4 138767773 138769838 + Epha2 protein_coding processed_transcript MGP_BALBcJ_T0068990.1 MGP_BALBcJ_G0029026.1 mouse_genomes_project 4 138775790 138779829 + Epha2 protein_coding processed_transcript MGP_BALBcJ_T0065176.1 MGP_BALBcJ_G0028153.1 mouse_genomes_project 4 38575694 38576283 - MGP_BALBcJ_P0065176 protein_coding protein_coding MGP_BALBcJ_T0007865.1 MGP_BALBcJ_G0006428.1 mouse_genomes_project 4 88694614 88699459 + Gm12670 lincRNA lincRNA MGP_BALBcJ_T0014426.1 MGP_BALBcJ_G0012523.1 mouse_genomes_project 4 15818046 15818898 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099846.1 MGP_BALBcJ_G0037882.1 mouse_genomes_project 4 89901857 89901965 - Gm22605 snRNA snRNA MGP_BALBcJ_T0099831.1 MGP_BALBcJ_G0037867.1 mouse_genomes_project 4 42312974 42313081 + Gm22055 snRNA snRNA MGP_BALBcJ_T0014655.1 MGP_BALBcJ_G0012752.1 mouse_genomes_project 4 97348492 97349243 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068714.1 MGP_BALBcJ_G0028967.1 mouse_genomes_project 4 134932247 134934740 - MGP_BALBcJ_P0068714 Ldlrad2 protein_coding protein_coding MGP_BALBcJ_T0068151.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128064061 128086707 + MGP_BALBcJ_P0068151 Laptm5 protein_coding protein_coding MGP_BALBcJ_T0068152.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128064244 128080021 + MGP_BALBcJ_P0068152 Laptm5 protein_coding protein_coding MGP_BALBcJ_T0068153.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128064250 128076398 + Laptm5 protein_coding processed_transcript MGP_BALBcJ_T0068154.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128064256 128080024 + Laptm5 protein_coding processed_transcript MGP_BALBcJ_T0068155.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128064257 128077697 + Laptm5 protein_coding processed_transcript MGP_BALBcJ_T0068156.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128064294 128084592 + MGP_BALBcJ_P0068156 Laptm5 protein_coding protein_coding MGP_BALBcJ_T0068157.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128066404 128080042 + Laptm5 protein_coding processed_transcript MGP_BALBcJ_T0068158.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128066602 128078184 + Laptm5 protein_coding processed_transcript MGP_BALBcJ_T0068159.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128066885 128086004 + MGP_BALBcJ_P0068159 Laptm5 protein_coding protein_coding MGP_BALBcJ_T0068160.1 MGP_BALBcJ_G0028837.1 mouse_genomes_project 4 128083365 128084876 + Laptm5 protein_coding processed_transcript MGP_BALBcJ_T0066052.1 MGP_BALBcJ_G0028370.1 mouse_genomes_project 4 71162028 71335233 + MGP_BALBcJ_P0066052 Kdm4c protein_coding protein_coding MGP_BALBcJ_T0066053.1 MGP_BALBcJ_G0028370.1 mouse_genomes_project 4 71171831 71335233 + MGP_BALBcJ_P0066053 Kdm4c protein_coding protein_coding MGP_BALBcJ_T0066054.1 MGP_BALBcJ_G0028370.1 mouse_genomes_project 4 71182706 71256022 + Kdm4c protein_coding processed_transcript MGP_BALBcJ_T0066055.1 MGP_BALBcJ_G0028370.1 mouse_genomes_project 4 71182706 71258135 + MGP_BALBcJ_P0066055 Kdm4c protein_coding protein_coding MGP_BALBcJ_T0066056.1 MGP_BALBcJ_G0028370.1 mouse_genomes_project 4 71182707 71193682 + Kdm4c protein_coding processed_transcript MGP_BALBcJ_T0066057.1 MGP_BALBcJ_G0028370.1 mouse_genomes_project 4 71182707 71189705 + Kdm4c protein_coding processed_transcript MGP_BALBcJ_T0066059.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72847102 73365708 - MGP_BALBcJ_P0066059 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066060.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72847103 73038436 - MGP_BALBcJ_P0066060 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066061.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850621 73509748 - MGP_BALBcJ_P0066061 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066062.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850773 73257655 - MGP_BALBcJ_P0066062 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066063.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850773 73231929 - MGP_BALBcJ_P0066063 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066064.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850773 73231929 - MGP_BALBcJ_P0066064 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066065.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850773 73231929 - MGP_BALBcJ_P0066065 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066066.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850773 73231908 - MGP_BALBcJ_P0066066 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066067.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72850773 73231929 - MGP_BALBcJ_P0066067 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066068.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72987939 73007121 - Ptprd protein_coding retained_intron MGP_BALBcJ_T0066069.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 72990066 72992212 - MGP_BALBcJ_P0066069 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066070.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 73005099 73012977 - MGP_BALBcJ_P0066070 Ptprd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066071.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 73037714 73038695 - MGP_BALBcJ_P0066071 Ptprd protein_coding protein_coding MGP_BALBcJ_T0066072.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 73043927 75131942 - Ptprd protein_coding processed_transcript MGP_BALBcJ_T0066073.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 73044903 73231953 - Ptprd protein_coding processed_transcript MGP_BALBcJ_T0066074.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 73506749 75131914 - Ptprd protein_coding processed_transcript MGP_BALBcJ_T0066075.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 73508986 75131786 - Ptprd protein_coding processed_transcript MGP_BALBcJ_T0066076.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 74126163 75131786 - Ptprd protein_coding retained_intron MGP_BALBcJ_T0066077.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 74287760 75132008 - Ptprd protein_coding processed_transcript MGP_BALBcJ_T0066078.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 74853202 75131899 - Ptprd protein_coding processed_transcript MGP_BALBcJ_T0066079.1 MGP_BALBcJ_G0028372.1 mouse_genomes_project 4 74860958 75131890 - Ptprd protein_coding retained_intron MGP_BALBcJ_T0068471.1 MGP_BALBcJ_G0028902.1 mouse_genomes_project 4 131484363 131487452 + MGP_BALBcJ_P0068471 Gm30191 protein_coding protein_coding MGP_BALBcJ_T0007871.1 MGP_BALBcJ_G0006434.1 mouse_genomes_project 4 92161745 92178634 + Gm12708 lincRNA lincRNA MGP_BALBcJ_T0007872.1 MGP_BALBcJ_G0006434.1 mouse_genomes_project 4 92161794 92175155 + Gm12708 lincRNA lincRNA MGP_BALBcJ_T0014593.1 MGP_BALBcJ_G0012690.1 mouse_genomes_project 4 73606509 73608962 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069218.1 MGP_BALBcJ_G0029102.1 mouse_genomes_project 4 146089953 146095732 + MGP_BALBcJ_P0069218 Fbxo2 protein_coding protein_coding MGP_BALBcJ_T0001430.1 MGP_BALBcJ_G0001351.1 mouse_genomes_project 4 154104232 154108346 - TEC TEC MGP_BALBcJ_T0007847.1 MGP_BALBcJ_G0006414.1 mouse_genomes_project 4 68928501 68947339 + lincRNA lincRNA MGP_BALBcJ_T0007823.1 MGP_BALBcJ_G0006393.1 mouse_genomes_project 4 51453177 51483023 + Gm12478 lincRNA lincRNA MGP_BALBcJ_T0007908.1 MGP_BALBcJ_G0006462.1 mouse_genomes_project 4 116050393 116058781 - lincRNA lincRNA MGP_BALBcJ_T0014740.1 MGP_BALBcJ_G0012837.1 mouse_genomes_project 4 121878958 121879587 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014735.1 MGP_BALBcJ_G0012832.1 mouse_genomes_project 4 120582856 120583174 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065081.1 MGP_BALBcJ_G0028131.1 mouse_genomes_project 4 38243242 38259018 + MGP_BALBcJ_P0065081 Nudt2 protein_coding protein_coding MGP_BALBcJ_T0066320.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91903693 91941299 - MGP_BALBcJ_P0066320 Mysm1 protein_coding protein_coding MGP_BALBcJ_T0066321.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91903716 91915476 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066322.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91908802 91915607 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066323.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91926468 91941274 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066324.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91927695 91941241 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066325.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91927735 91932761 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066326.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91927827 91941277 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066327.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91932388 91941252 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0066328.1 MGP_BALBcJ_G0028436.1 mouse_genomes_project 4 91934554 91941274 - Mysm1 protein_coding processed_transcript MGP_BALBcJ_T0014509.1 MGP_BALBcJ_G0012606.1 mouse_genomes_project 4 42088308 42088602 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067151.1 MGP_BALBcJ_G0028609.1 mouse_genomes_project 4 113580188 113617995 + MGP_BALBcJ_P0067151 Gpbp1l1 protein_coding protein_coding MGP_BALBcJ_T0067152.1 MGP_BALBcJ_G0028609.1 mouse_genomes_project 4 113580609 113616887 + MGP_BALBcJ_P0067152 Gpbp1l1 protein_coding protein_coding MGP_BALBcJ_T0067153.1 MGP_BALBcJ_G0028609.1 mouse_genomes_project 4 113602665 113605307 + Gpbp1l1 protein_coding processed_transcript MGP_BALBcJ_T0067154.1 MGP_BALBcJ_G0028609.1 mouse_genomes_project 4 113605217 113612657 + Gpbp1l1 protein_coding processed_transcript MGP_BALBcJ_T0099885.1 MGP_BALBcJ_G0037921.1 mouse_genomes_project 4 133431474 133431577 + Gm26001 snRNA snRNA MGP_BALBcJ_T0014666.1 MGP_BALBcJ_G0012763.1 mouse_genomes_project 4 100542203 100543557 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066267.1 MGP_BALBcJ_G0028413.1 mouse_genomes_project 4 85813428 85814001 + MGP_BALBcJ_P0066267 Ifna7 protein_coding protein_coding MGP_BALBcJ_T0064741.1 MGP_BALBcJ_G0028045.1 mouse_genomes_project 4 12605475 12646125 - MGP_BALBcJ_P0064741 Ripk2 protein_coding protein_coding MGP_BALBcJ_T0064742.1 MGP_BALBcJ_G0028045.1 mouse_genomes_project 4 12605483 12646121 - MGP_BALBcJ_P0064742 Ripk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0007826.1 MGP_BALBcJ_G0006395.1 mouse_genomes_project 4 52244529 52260836 - Gm12510 lincRNA lincRNA MGP_BALBcJ_T0101183.1 MGP_BALBcJ_G0039219.1 mouse_genomes_project 4 152204798 152204942 + Gm26036 snoRNA snoRNA MGP_BALBcJ_T0069645.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - Prdm16 protein_coding processed_transcript MGP_BALBcJ_T0069646.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - MGP_BALBcJ_P0069646 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069647.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - MGP_BALBcJ_P0069647 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069648.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - MGP_BALBcJ_P0069648 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069649.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - MGP_BALBcJ_P0069649 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069650.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - MGP_BALBcJ_P0069650 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069651.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152393840 152717160 - MGP_BALBcJ_P0069651 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069652.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152401037 152412927 - Prdm16 protein_coding processed_transcript MGP_BALBcJ_T0069653.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152406320 152412997 - Prdm16 protein_coding processed_transcript MGP_BALBcJ_T0069655.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152424195 152426514 - Prdm16 protein_coding processed_transcript MGP_BALBcJ_T0069656.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152433345 152717167 - MGP_BALBcJ_P0069656 Prdm16 protein_coding protein_coding MGP_BALBcJ_T0069657.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152554495 152606974 - Prdm16 protein_coding processed_transcript MGP_BALBcJ_T0069658.1 MGP_BALBcJ_G0029177.1 mouse_genomes_project 4 152554526 152717091 - Prdm16 protein_coding processed_transcript MGP_BALBcJ_T0064958.1 MGP_BALBcJ_G0028100.1 mouse_genomes_project 4 31439662 31452376 - MGP_BALBcJ_P0064958 Gm136 protein_coding protein_coding MGP_BALBcJ_T0068699.1 MGP_BALBcJ_G0028958.1 mouse_genomes_project 4 134218372 134221259 - MGP_BALBcJ_P0068699 C1qa protein_coding protein_coding MGP_BALBcJ_T0069716.1 MGP_BALBcJ_G0029190.1 mouse_genomes_project 4 153236318 153270263 - Ski protein_coding processed_transcript MGP_BALBcJ_T0069717.1 MGP_BALBcJ_G0029190.1 mouse_genomes_project 4 153236318 153304906 - MGP_BALBcJ_P0069717 Ski protein_coding protein_coding MGP_BALBcJ_T0069718.1 MGP_BALBcJ_G0029190.1 mouse_genomes_project 4 153236318 153304963 - MGP_BALBcJ_P0069718 Ski protein_coding protein_coding MGP_BALBcJ_T0014648.1 MGP_BALBcJ_G0012745.1 mouse_genomes_project 4 95332027 95332335 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014770.1 MGP_BALBcJ_G0012867.1 mouse_genomes_project 4 133138958 133139454 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068800.1 MGP_BALBcJ_G0028980.1 mouse_genomes_project 4 135811219 135818814 + MGP_BALBcJ_P0068800 Mul1 protein_coding protein_coding MGP_BALBcJ_T0068801.1 MGP_BALBcJ_G0028980.1 mouse_genomes_project 4 135811225 135818811 + MGP_BALBcJ_P0068801 Mul1 protein_coding protein_coding MGP_BALBcJ_T0068802.1 MGP_BALBcJ_G0028980.1 mouse_genomes_project 4 135811271 135815566 + MGP_BALBcJ_P0068802 Mul1 protein_coding protein_coding MGP_BALBcJ_T0065012.1 MGP_BALBcJ_G0028115.1 mouse_genomes_project 4 37445996 37467808 - MGP_BALBcJ_P0065012 Aptx protein_coding protein_coding MGP_BALBcJ_T0065013.1 MGP_BALBcJ_G0028115.1 mouse_genomes_project 4 37445996 37468088 - MGP_BALBcJ_P0065013 Aptx protein_coding protein_coding MGP_BALBcJ_T0065014.1 MGP_BALBcJ_G0028115.1 mouse_genomes_project 4 37448538 37468056 - MGP_BALBcJ_P0065014 Aptx protein_coding protein_coding MGP_BALBcJ_T0065015.1 MGP_BALBcJ_G0028115.1 mouse_genomes_project 4 37449736 37468081 - MGP_BALBcJ_P0065015 Aptx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065016.1 MGP_BALBcJ_G0028115.1 mouse_genomes_project 4 37455353 37459417 - Aptx protein_coding processed_transcript MGP_BALBcJ_T0065017.1 MGP_BALBcJ_G0028115.1 mouse_genomes_project 4 37459929 37467610 - MGP_BALBcJ_P0065017 Aptx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067561.1 MGP_BALBcJ_G0028702.1 mouse_genomes_project 4 118124420 118141390 + MGP_BALBcJ_P0067561 Col9a2 protein_coding protein_coding MGP_BALBcJ_T0067562.1 MGP_BALBcJ_G0028702.1 mouse_genomes_project 4 118124783 118130440 + Col9a2 protein_coding retained_intron MGP_BALBcJ_T0067563.1 MGP_BALBcJ_G0028702.1 mouse_genomes_project 4 118139066 118140887 + Col9a2 protein_coding processed_transcript MGP_BALBcJ_T0067708.1 MGP_BALBcJ_G0028744.1 mouse_genomes_project 4 122249072 122259484 - MGP_BALBcJ_P0067708 Dnali1 protein_coding protein_coding MGP_BALBcJ_T0018001.1 MGP_BALBcJ_G0015478.1 mouse_genomes_project 4 29973638 29980683 - Gm11934 processed_transcript processed_transcript MGP_BALBcJ_T0068594.1 MGP_BALBcJ_G0028933.1 mouse_genomes_project 4 133141027 133151566 + MGP_BALBcJ_P0068594 protein_coding protein_coding MGP_BALBcJ_T0068595.1 MGP_BALBcJ_G0028933.1 mouse_genomes_project 4 133141392 133144079 + protein_coding processed_transcript MGP_BALBcJ_T0068596.1 MGP_BALBcJ_G0028933.1 mouse_genomes_project 4 133141412 133144509 + protein_coding processed_transcript MGP_BALBcJ_T0065567.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42884685 42908814 - MGP_BALBcJ_P0065567 Tstd2 protein_coding protein_coding MGP_BALBcJ_T0065568.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42885637 42908777 - MGP_BALBcJ_P0065568 Tstd2 protein_coding protein_coding MGP_BALBcJ_T0065569.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42893314 42908752 - Tstd2 protein_coding retained_intron MGP_BALBcJ_T0065570.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42899095 42902270 - Tstd2 protein_coding retained_intron MGP_BALBcJ_T0065571.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42902280 42909033 - MGP_BALBcJ_P0065571 Tstd2 protein_coding protein_coding MGP_BALBcJ_T0065572.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42902343 42908748 - MGP_BALBcJ_P0065572 Tstd2 protein_coding protein_coding MGP_BALBcJ_T0065573.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42902492 42906122 - MGP_BALBcJ_P0065573 Tstd2 protein_coding protein_coding MGP_BALBcJ_T0065574.1 MGP_BALBcJ_G0028231.1 mouse_genomes_project 4 42905845 42908794 - MGP_BALBcJ_P0065574 Tstd2 protein_coding protein_coding MGP_BALBcJ_T0099814.1 MGP_BALBcJ_G0037850.1 mouse_genomes_project 4 14053800 14053903 - Gm23384 snRNA snRNA MGP_BALBcJ_T0007913.1 MGP_BALBcJ_G0006467.1 mouse_genomes_project 4 121463410 121471096 - Gm12916 lincRNA lincRNA MGP_BALBcJ_T0066468.1 MGP_BALBcJ_G0028468.1 mouse_genomes_project 4 97466500 97540190 + MGP_BALBcJ_P0066468 Ube2u protein_coding protein_coding MGP_BALBcJ_T0066469.1 MGP_BALBcJ_G0028468.1 mouse_genomes_project 4 97466518 97540188 + MGP_BALBcJ_P0066469 Ube2u protein_coding protein_coding MGP_BALBcJ_T0065760.1 MGP_BALBcJ_G0028287.1 mouse_genomes_project 4 53535942 53537381 - MGP_BALBcJ_P0065760 Actl7b protein_coding protein_coding MGP_BALBcJ_T0014445.1 MGP_BALBcJ_G0012542.1 mouse_genomes_project 4 22054147 22054638 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065727.1 MGP_BALBcJ_G0028278.1 mouse_genomes_project 4 49844172 49970288 - MGP_BALBcJ_P0065727 Abca1 protein_coding protein_coding MGP_BALBcJ_T0065728.1 MGP_BALBcJ_G0028278.1 mouse_genomes_project 4 49848873 49854298 - Abca1 protein_coding processed_transcript MGP_BALBcJ_T0007890.1 MGP_BALBcJ_G0006449.1 mouse_genomes_project 4 103280608 103281595 + Gm12730 lincRNA lincRNA MGP_BALBcJ_T0014766.1 MGP_BALBcJ_G0012863.1 mouse_genomes_project 4 132574524 132574714 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004435.1 MGP_BALBcJ_G0003864.1 mouse_genomes_project 4 41987994 41997295 - Frmpd1os antisense antisense MGP_BALBcJ_T0067604.1 MGP_BALBcJ_G0028717.1 mouse_genomes_project 4 120328549 120340018 + MGP_BALBcJ_P0067604 Hpcal4 protein_coding protein_coding MGP_BALBcJ_T0067605.1 MGP_BALBcJ_G0028717.1 mouse_genomes_project 4 120328561 120336830 + MGP_BALBcJ_P0067605 Hpcal4 protein_coding protein_coding MGP_BALBcJ_T0067606.1 MGP_BALBcJ_G0028717.1 mouse_genomes_project 4 120328821 120334115 + MGP_BALBcJ_P0067606 Hpcal4 protein_coding protein_coding MGP_BALBcJ_T0067607.1 MGP_BALBcJ_G0028717.1 mouse_genomes_project 4 120328838 120329476 + Hpcal4 protein_coding processed_transcript MGP_BALBcJ_T0067608.1 MGP_BALBcJ_G0028717.1 mouse_genomes_project 4 120329051 120336061 + MGP_BALBcJ_P0067608 Hpcal4 protein_coding protein_coding MGP_BALBcJ_T0014811.1 MGP_BALBcJ_G0012908.1 mouse_genomes_project 4 148841674 148842378 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065724.1 MGP_BALBcJ_G0028277.1 mouse_genomes_project 4 49824940 49835446 + MGP_BALBcJ_P0065724 Nipsnap3b protein_coding protein_coding MGP_BALBcJ_T0065725.1 MGP_BALBcJ_G0028277.1 mouse_genomes_project 4 49825010 49834962 + MGP_BALBcJ_P0065725 Nipsnap3b protein_coding protein_coding MGP_BALBcJ_T0065726.1 MGP_BALBcJ_G0028277.1 mouse_genomes_project 4 49834361 49834891 + Nipsnap3b protein_coding processed_transcript MGP_BALBcJ_T0099879.1 MGP_BALBcJ_G0037915.1 mouse_genomes_project 4 129612518 129612612 + Gm23055 snRNA snRNA MGP_BALBcJ_T0004539.1 MGP_BALBcJ_G0003943.1 mouse_genomes_project 4 134796212 134798018 - Gm13010 antisense antisense MGP_BALBcJ_T0014805.1 MGP_BALBcJ_G0012902.1 mouse_genomes_project 4 147047360 147047680 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066704.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104295864 104311263 - MGP_BALBcJ_P0066704 Dio1 protein_coding protein_coding MGP_BALBcJ_T0066705.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104296566 104311236 - MGP_BALBcJ_P0066705 Dio1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066706.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104296729 104311218 - MGP_BALBcJ_P0066706 Dio1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066707.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104296733 104311218 - MGP_BALBcJ_P0066707 Dio1 protein_coding protein_coding MGP_BALBcJ_T0066708.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104296763 104311212 - MGP_BALBcJ_P0066708 Dio1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066709.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104296763 104311212 - MGP_BALBcJ_P0066709 Dio1 protein_coding protein_coding MGP_BALBcJ_T0066710.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104296763 104311212 - MGP_BALBcJ_P0066710 Dio1 protein_coding protein_coding MGP_BALBcJ_T0066711.1 MGP_BALBcJ_G0028519.1 mouse_genomes_project 4 104303951 104311160 - Dio1 protein_coding processed_transcript MGP_BALBcJ_T0067026.1 MGP_BALBcJ_G0028580.1 mouse_genomes_project 4 112392344 112419312 + MGP_BALBcJ_P0067026 protein_coding protein_coding MGP_BALBcJ_T0010554.1 MGP_BALBcJ_G0008679.1 mouse_genomes_project 4 7305630 7305737 + n-TSaga9 miRNA miRNA MGP_BALBcJ_T0064671.1 MGP_BALBcJ_G0028024.1 mouse_genomes_project 4 8045709 8053636 + MGP_BALBcJ_P0064671 Fsbp protein_coding protein_coding MGP_BALBcJ_T0101111.1 MGP_BALBcJ_G0039147.1 mouse_genomes_project 4 36068403 36068529 + Gm23607 snoRNA snoRNA MGP_BALBcJ_T0014713.1 MGP_BALBcJ_G0012810.1 mouse_genomes_project 4 115580801 115581393 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014519.1 MGP_BALBcJ_G0012616.1 mouse_genomes_project 4 45782117 45782455 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067405.1 MGP_BALBcJ_G0028659.1 mouse_genomes_project 4 115761475 115762414 + MGP_BALBcJ_P0067405 Olfr1341 protein_coding protein_coding MGP_BALBcJ_T0007874.1 MGP_BALBcJ_G0006436.1 mouse_genomes_project 4 96165996 96185064 - Gm12681 lincRNA lincRNA MGP_BALBcJ_T0014514.1 MGP_BALBcJ_G0012611.1 mouse_genomes_project 4 43197286 43197609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069857.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153961573 153980825 + Cpsf3l protein_coding processed_transcript MGP_BALBcJ_T0069858.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153961573 153981439 + MGP_BALBcJ_P0069858 Cpsf3l protein_coding protein_coding MGP_BALBcJ_T0069859.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153961573 153980811 + MGP_BALBcJ_P0069859 Cpsf3l protein_coding protein_coding MGP_BALBcJ_T0069860.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153961594 153964349 + Cpsf3l protein_coding retained_intron MGP_BALBcJ_T0069861.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153961642 153979051 + MGP_BALBcJ_P0069861 Cpsf3l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069862.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153979910 153980613 + Cpsf3l protein_coding retained_intron MGP_BALBcJ_T0069864.1 MGP_BALBcJ_G0029217.1 mouse_genomes_project 4 153980248 153980859 + Cpsf3l protein_coding retained_intron MGP_BALBcJ_T0069125.1 MGP_BALBcJ_G0029076.1 mouse_genomes_project 4 142260631 142270006 + MGP_BALBcJ_P0069125 9430007A20Rik protein_coding protein_coding MGP_BALBcJ_T0065651.1 MGP_BALBcJ_G0028252.1 mouse_genomes_project 4 45072367 45098437 + Invs protein_coding processed_transcript MGP_BALBcJ_T0065652.1 MGP_BALBcJ_G0028252.1 mouse_genomes_project 4 45072407 45073663 + Invs protein_coding processed_transcript MGP_BALBcJ_T0065653.1 MGP_BALBcJ_G0028252.1 mouse_genomes_project 4 45072409 45226381 + MGP_BALBcJ_P0065653 Invs protein_coding protein_coding MGP_BALBcJ_T0065654.1 MGP_BALBcJ_G0028252.1 mouse_genomes_project 4 45072423 45079692 + Invs protein_coding processed_transcript MGP_BALBcJ_T0065655.1 MGP_BALBcJ_G0028252.1 mouse_genomes_project 4 45072433 45221778 + MGP_BALBcJ_P0065655 Invs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065656.1 MGP_BALBcJ_G0028252.1 mouse_genomes_project 4 45174520 45188769 + Invs protein_coding processed_transcript MGP_BALBcJ_T0014598.1 MGP_BALBcJ_G0012695.1 mouse_genomes_project 4 75157312 75158238 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099878.1 MGP_BALBcJ_G0037914.1 mouse_genomes_project 4 129435791 129435925 - Rnu11 snRNA snRNA MGP_BALBcJ_T0014645.1 MGP_BALBcJ_G0012742.1 mouse_genomes_project 4 95126226 95126682 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014463.1 MGP_BALBcJ_G0012560.1 mouse_genomes_project 4 25797038 25797759 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007881.1 MGP_BALBcJ_G0006443.1 mouse_genomes_project 4 98303631 98353607 + 0610043K17Rik lincRNA lincRNA MGP_BALBcJ_T0007883.1 MGP_BALBcJ_G0006443.1 mouse_genomes_project 4 98317127 98345294 + 0610043K17Rik lincRNA lincRNA MGP_BALBcJ_T0068125.1 MGP_BALBcJ_G0028830.1 mouse_genomes_project 4 127614303 127614816 - MGP_BALBcJ_P0068125 Gm10570 protein_coding protein_coding MGP_BALBcJ_T0066465.1 MGP_BALBcJ_G0028466.1 mouse_genomes_project 4 96925627 96982745 + MGP_BALBcJ_P0066465 Pgm2 protein_coding protein_coding MGP_BALBcJ_T0066466.1 MGP_BALBcJ_G0028466.1 mouse_genomes_project 4 96951775 96982745 + MGP_BALBcJ_P0066466 Pgm2 protein_coding protein_coding MGP_BALBcJ_T0004485.1 MGP_BALBcJ_G0003899.1 mouse_genomes_project 4 105957060 105983214 - 8030443G20Rik antisense antisense MGP_BALBcJ_T0102509.1 MGP_BALBcJ_G0040325.1 mouse_genomes_project 4 49749076 49750027 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014579.1 MGP_BALBcJ_G0012676.1 mouse_genomes_project 4 70367929 70369104 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014710.1 MGP_BALBcJ_G0012807.1 mouse_genomes_project 4 114877862 114878338 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004419.1 MGP_BALBcJ_G0003850.1 mouse_genomes_project 4 31666641 31671387 + Gm12364 antisense antisense MGP_BALBcJ_T0099865.1 MGP_BALBcJ_G0037901.1 mouse_genomes_project 4 114230244 114230360 + Gm25099 snRNA snRNA MGP_BALBcJ_T0069559.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150418521 150477346 - MGP_BALBcJ_P0069559 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0069560.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150418523 150506378 - MGP_BALBcJ_P0069560 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0069561.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150418524 150506032 - MGP_BALBcJ_P0069561 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0069562.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150420500 150505940 - MGP_BALBcJ_P0069562 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0069563.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150420561 150477346 - MGP_BALBcJ_P0069563 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0069564.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150422767 150451061 - Kcnab2 protein_coding processed_transcript MGP_BALBcJ_T0069565.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150428990 150458965 - Kcnab2 protein_coding processed_transcript MGP_BALBcJ_T0069566.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150429910 150483550 - MGP_BALBcJ_P0069566 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0069567.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150431010 150477247 - Kcnab2 protein_coding processed_transcript MGP_BALBcJ_T0069568.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150439814 150506051 - Kcnab2 protein_coding retained_intron MGP_BALBcJ_T0069569.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150439968 150454162 - Kcnab2 protein_coding processed_transcript MGP_BALBcJ_T0069570.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150440798 150446379 - Kcnab2 protein_coding processed_transcript MGP_BALBcJ_T0069571.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150454731 150477247 - Kcnab2 protein_coding processed_transcript MGP_BALBcJ_T0069572.1 MGP_BALBcJ_G0029163.1 mouse_genomes_project 4 150463103 150506002 - MGP_BALBcJ_P0069572 Kcnab2 protein_coding protein_coding MGP_BALBcJ_T0007842.1 MGP_BALBcJ_G0006409.1 mouse_genomes_project 4 61032102 61040317 + Gm11216 lincRNA lincRNA MGP_BALBcJ_T0014454.1 MGP_BALBcJ_G0012551.1 mouse_genomes_project 4 24592604 24592927 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065994.1 MGP_BALBcJ_G0028351.1 mouse_genomes_project 4 60513623 60540171 + MGP_BALBcJ_P0065994 Tmem268 protein_coding protein_coding MGP_BALBcJ_T0065995.1 MGP_BALBcJ_G0028351.1 mouse_genomes_project 4 60513698 60517334 + Tmem268 protein_coding processed_transcript MGP_BALBcJ_T0065996.1 MGP_BALBcJ_G0028351.1 mouse_genomes_project 4 60515069 60524865 + MGP_BALBcJ_P0065996 Tmem268 protein_coding protein_coding MGP_BALBcJ_T0065997.1 MGP_BALBcJ_G0028351.1 mouse_genomes_project 4 60515069 60524896 + MGP_BALBcJ_P0065997 Tmem268 protein_coding protein_coding MGP_BALBcJ_T0065998.1 MGP_BALBcJ_G0028351.1 mouse_genomes_project 4 60515202 60540167 + MGP_BALBcJ_P0065998 Tmem268 protein_coding protein_coding MGP_BALBcJ_T0067267.1 MGP_BALBcJ_G0028631.1 mouse_genomes_project 4 114288537 114306004 + MGP_BALBcJ_P0067267 Tmem53 protein_coding protein_coding MGP_BALBcJ_T0067268.1 MGP_BALBcJ_G0028631.1 mouse_genomes_project 4 114288626 114305938 + MGP_BALBcJ_P0067268 Tmem53 protein_coding protein_coding MGP_BALBcJ_T0067269.1 MGP_BALBcJ_G0028631.1 mouse_genomes_project 4 114288628 114306006 + MGP_BALBcJ_P0067269 Tmem53 protein_coding protein_coding MGP_BALBcJ_T0067270.1 MGP_BALBcJ_G0028631.1 mouse_genomes_project 4 114288648 114305320 + Tmem53 protein_coding processed_transcript MGP_BALBcJ_T0067271.1 MGP_BALBcJ_G0028631.1 mouse_genomes_project 4 114288926 114306004 + MGP_BALBcJ_P0067271 Tmem53 protein_coding protein_coding MGP_BALBcJ_T0067272.1 MGP_BALBcJ_G0028631.1 mouse_genomes_project 4 114302794 114306006 + Tmem53 protein_coding processed_transcript MGP_BALBcJ_T0007933.1 MGP_BALBcJ_G0006478.1 mouse_genomes_project 4 125880884 125881861 + Gm12958 lincRNA lincRNA MGP_BALBcJ_T0004590.1 MGP_BALBcJ_G0003982.1 mouse_genomes_project 4 152629460 152636842 + Gm13133 antisense antisense MGP_BALBcJ_T0066998.1 MGP_BALBcJ_G0028570.1 mouse_genomes_project 4 111383442 111593497 + MGP_BALBcJ_P0066998 Trabd2b protein_coding protein_coding MGP_BALBcJ_T0069906.1 MGP_BALBcJ_G0029225.1 mouse_genomes_project 4 154111609 154114337 + MGP_BALBcJ_P0069906 Tnfrsf18 protein_coding protein_coding MGP_BALBcJ_T0069907.1 MGP_BALBcJ_G0029225.1 mouse_genomes_project 4 154111777 154114333 + Tnfrsf18 protein_coding retained_intron MGP_BALBcJ_T0069908.1 MGP_BALBcJ_G0029225.1 mouse_genomes_project 4 154111787 154114333 + MGP_BALBcJ_P0069908 Tnfrsf18 protein_coding protein_coding MGP_BALBcJ_T0069909.1 MGP_BALBcJ_G0029225.1 mouse_genomes_project 4 154111787 154114333 + MGP_BALBcJ_P0069909 Tnfrsf18 protein_coding protein_coding MGP_BALBcJ_T0069910.1 MGP_BALBcJ_G0029225.1 mouse_genomes_project 4 154111823 154113817 + Tnfrsf18 protein_coding processed_transcript MGP_BALBcJ_T0069911.1 MGP_BALBcJ_G0029225.1 mouse_genomes_project 4 154113813 154114337 + Tnfrsf18 protein_coding processed_transcript MGP_BALBcJ_T0017985.1 MGP_BALBcJ_G0015470.1 mouse_genomes_project 4 658574 699311 + A830012C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0004474.1 MGP_BALBcJ_G0003892.1 mouse_genomes_project 4 103546091 103549341 - 2700068H02Rik antisense antisense MGP_BALBcJ_T0065895.1 MGP_BALBcJ_G0028323.1 mouse_genomes_project 4 56846677 56850405 + MGP_BALBcJ_P0065895 Mup6 protein_coding protein_coding MGP_BALBcJ_T0068341.1 MGP_BALBcJ_G0028874.1 mouse_genomes_project 4 130483134 130534009 - MGP_BALBcJ_P0068341 Wdtc1 protein_coding protein_coding MGP_BALBcJ_T0068342.1 MGP_BALBcJ_G0028874.1 mouse_genomes_project 4 130499200 130547553 - Wdtc1 protein_coding processed_transcript MGP_BALBcJ_T0068343.1 MGP_BALBcJ_G0028874.1 mouse_genomes_project 4 130504258 130516148 - Wdtc1 protein_coding processed_transcript MGP_BALBcJ_T0068344.1 MGP_BALBcJ_G0028874.1 mouse_genomes_project 4 130504883 130548144 - Wdtc1 protein_coding processed_transcript MGP_BALBcJ_T0101122.1 MGP_BALBcJ_G0039158.1 mouse_genomes_project 4 48455739 48455848 + Gm23043 snoRNA snoRNA MGP_BALBcJ_T0014574.1 MGP_BALBcJ_G0012671.1 mouse_genomes_project 4 68643200 68644894 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068299.1 MGP_BALBcJ_G0028866.1 mouse_genomes_project 4 130164162 130174465 + Fgr protein_coding processed_transcript MGP_BALBcJ_T0068300.1 MGP_BALBcJ_G0028866.1 mouse_genomes_project 4 130164169 130191861 + MGP_BALBcJ_P0068300 Fgr protein_coding protein_coding MGP_BALBcJ_T0068301.1 MGP_BALBcJ_G0028866.1 mouse_genomes_project 4 130167181 130190702 + Fgr protein_coding processed_transcript MGP_BALBcJ_T0010634.1 MGP_BALBcJ_G0008759.1 mouse_genomes_project 4 147493164 147493224 + Mir5616 miRNA miRNA MGP_BALBcJ_T0065186.1 MGP_BALBcJ_G0028160.1 mouse_genomes_project 4 39307851 39308458 - MGP_BALBcJ_P0065186 Gm10931 protein_coding protein_coding MGP_BALBcJ_T0067862.1 MGP_BALBcJ_G0028779.1 mouse_genomes_project 4 124550953 124554717 - MGP_BALBcJ_P0067862 Gjb3 protein_coding protein_coding MGP_BALBcJ_T0067863.1 MGP_BALBcJ_G0028779.1 mouse_genomes_project 4 124550953 124556400 - MGP_BALBcJ_P0067863 Gjb3 protein_coding protein_coding MGP_BALBcJ_T0069739.1 MGP_BALBcJ_G0029193.1 mouse_genomes_project 4 153471950 153484713 - Gabrd protein_coding processed_transcript MGP_BALBcJ_T0069740.1 MGP_BALBcJ_G0029193.1 mouse_genomes_project 4 153471950 153484777 - MGP_BALBcJ_P0069740 Gabrd protein_coding protein_coding MGP_BALBcJ_T0069741.1 MGP_BALBcJ_G0029193.1 mouse_genomes_project 4 153475535 153484702 - Gabrd protein_coding processed_transcript MGP_BALBcJ_T0014658.1 MGP_BALBcJ_G0012755.1 mouse_genomes_project 4 98156994 98157166 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068249.1 MGP_BALBcJ_G0028854.1 mouse_genomes_project 4 129671925 129690816 - MGP_BALBcJ_P0068249 Sesn2 protein_coding protein_coding MGP_BALBcJ_T0007856.1 MGP_BALBcJ_G0006421.1 mouse_genomes_project 4 80976461 80979302 - 6030471H07Rik lincRNA lincRNA MGP_BALBcJ_T0064765.1 MGP_BALBcJ_G0028056.1 mouse_genomes_project 4 16577779 16602936 + MGP_BALBcJ_P0064765 Ggh protein_coding protein_coding MGP_BALBcJ_T0067807.1 MGP_BALBcJ_G0028766.1 mouse_genomes_project 4 123826527 123833646 + MGP_BALBcJ_P0067807 5730409E04Rik protein_coding protein_coding MGP_BALBcJ_T0067808.1 MGP_BALBcJ_G0028766.1 mouse_genomes_project 4 123826563 123833646 + MGP_BALBcJ_P0067808 5730409E04Rik protein_coding protein_coding MGP_BALBcJ_T0067914.1 MGP_BALBcJ_G0028793.1 mouse_genomes_project 4 126311130 126337740 + MGP_BALBcJ_P0067914 Rnf19b protein_coding protein_coding MGP_BALBcJ_T0067915.1 MGP_BALBcJ_G0028793.1 mouse_genomes_project 4 126311130 126338949 + MGP_BALBcJ_P0067915 Rnf19b protein_coding protein_coding MGP_BALBcJ_T0067916.1 MGP_BALBcJ_G0028793.1 mouse_genomes_project 4 126311268 126333775 + MGP_BALBcJ_P0067916 Rnf19b protein_coding protein_coding MGP_BALBcJ_T0067917.1 MGP_BALBcJ_G0028793.1 mouse_genomes_project 4 126311673 126337740 + MGP_BALBcJ_P0067917 Rnf19b protein_coding protein_coding MGP_BALBcJ_T0067918.1 MGP_BALBcJ_G0028793.1 mouse_genomes_project 4 126332196 126339100 + MGP_BALBcJ_P0067918 Rnf19b protein_coding protein_coding MGP_BALBcJ_T0067919.1 MGP_BALBcJ_G0028793.1 mouse_genomes_project 4 126337098 126339100 + Rnf19b protein_coding processed_transcript MGP_BALBcJ_T0001412.1 MGP_BALBcJ_G0001334.1 mouse_genomes_project 4 96545941 96550614 + TEC TEC MGP_BALBcJ_T0005599.1 MGP_BALBcJ_G0004719.1 mouse_genomes_project 4 104794402 104803797 - Lrp8os3 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0068866.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136738041 136740258 - Mrto4 protein_coding processed_transcript MGP_BALBcJ_T0068867.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136738041 136743204 - MGP_BALBcJ_P0068867 Mrto4 protein_coding protein_coding MGP_BALBcJ_T0068868.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136738051 136742926 - MGP_BALBcJ_P0068868 Mrto4 protein_coding protein_coding MGP_BALBcJ_T0068869.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136738768 136740276 - Mrto4 protein_coding retained_intron MGP_BALBcJ_T0068870.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136739369 136742939 - MGP_BALBcJ_P0068870 Mrto4 protein_coding protein_coding MGP_BALBcJ_T0068871.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136739431 136743161 - Mrto4 protein_coding retained_intron MGP_BALBcJ_T0068872.1 MGP_BALBcJ_G0028999.1 mouse_genomes_project 4 136740529 136742938 - Mrto4 protein_coding retained_intron MGP_BALBcJ_T0066607.1 MGP_BALBcJ_G0028500.1 mouse_genomes_project 4 103432558 103454816 - MGP_BALBcJ_P0066607 Pcsk9 protein_coding protein_coding MGP_BALBcJ_T0067385.1 MGP_BALBcJ_G0028652.1 mouse_genomes_project 4 115534724 115553273 - MGP_BALBcJ_P0067385 Tie1 protein_coding protein_coding MGP_BALBcJ_T0067386.1 MGP_BALBcJ_G0028652.1 mouse_genomes_project 4 115534724 115553579 - MGP_BALBcJ_P0067386 Tie1 protein_coding protein_coding MGP_BALBcJ_T0067387.1 MGP_BALBcJ_G0028652.1 mouse_genomes_project 4 115541585 115553311 - Tie1 protein_coding processed_transcript MGP_BALBcJ_T0067131.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113333161 113492725 - MGP_BALBcJ_P0067131 Mast2 protein_coding protein_coding MGP_BALBcJ_T0067132.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113333162 113493133 - MGP_BALBcJ_P0067132 Mast2 protein_coding protein_coding MGP_BALBcJ_T0067133.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113333162 113493133 - MGP_BALBcJ_P0067133 Mast2 protein_coding protein_coding MGP_BALBcJ_T0067134.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113333214 113492889 - MGP_BALBcJ_P0067134 Mast2 protein_coding protein_coding MGP_BALBcJ_T0067135.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113334407 113335605 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067136.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113335979 113337201 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067137.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113336011 113337048 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067138.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113338690 113342476 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067139.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113339252 113344160 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067140.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113344119 113354174 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067141.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113346248 113357056 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067142.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113348833 113433333 - MGP_BALBcJ_P0067142 Mast2 protein_coding protein_coding MGP_BALBcJ_T0067143.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113353994 113433349 - MGP_BALBcJ_P0067143 Mast2 protein_coding protein_coding MGP_BALBcJ_T0067144.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113359302 113434154 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0067145.1 MGP_BALBcJ_G0028606.1 mouse_genomes_project 4 113359591 113464270 - Mast2 protein_coding processed_transcript MGP_BALBcJ_T0069766.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153655436 153683818 + MGP_BALBcJ_P0069766 Nadk protein_coding protein_coding MGP_BALBcJ_T0069767.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153656790 153683822 + MGP_BALBcJ_P0069767 Nadk protein_coding protein_coding MGP_BALBcJ_T0069768.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153656916 153669914 + Nadk protein_coding processed_transcript MGP_BALBcJ_T0069769.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153656932 153669908 + MGP_BALBcJ_P0069769 Nadk protein_coding protein_coding MGP_BALBcJ_T0069770.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153656998 153672204 + MGP_BALBcJ_P0069770 Nadk protein_coding protein_coding MGP_BALBcJ_T0069771.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153657162 153672158 + MGP_BALBcJ_P0069771 Nadk protein_coding protein_coding MGP_BALBcJ_T0069772.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153675315 153683822 + MGP_BALBcJ_P0069772 Nadk protein_coding protein_coding MGP_BALBcJ_T0069773.1 MGP_BALBcJ_G0029197.1 mouse_genomes_project 4 153679597 153682441 + Nadk protein_coding processed_transcript MGP_BALBcJ_T0069176.1 MGP_BALBcJ_G0029093.1 mouse_genomes_project 4 145915856 145917274 + MGP_BALBcJ_P0069176 Nppb protein_coding protein_coding MGP_BALBcJ_T0064631.1 MGP_BALBcJ_G0028017.1 mouse_genomes_project 4 7594940 7615604 + MGP_BALBcJ_P0064631 Trp53inp1 protein_coding protein_coding MGP_BALBcJ_T0064632.1 MGP_BALBcJ_G0028017.1 mouse_genomes_project 4 7594950 7615604 + Trp53inp1 protein_coding processed_transcript MGP_BALBcJ_T0064633.1 MGP_BALBcJ_G0028017.1 mouse_genomes_project 4 7594953 7607625 + Trp53inp1 protein_coding processed_transcript MGP_BALBcJ_T0064634.1 MGP_BALBcJ_G0028017.1 mouse_genomes_project 4 7605683 7609239 + Trp53inp1 protein_coding processed_transcript MGP_BALBcJ_T0014818.1 MGP_BALBcJ_G0012915.1 mouse_genomes_project 4 153593038 153593429 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065917.1 MGP_BALBcJ_G0028332.1 mouse_genomes_project 4 59343783 59361977 + MGP_BALBcJ_P0065917 Prpf4 protein_coding protein_coding MGP_BALBcJ_T0065918.1 MGP_BALBcJ_G0028332.1 mouse_genomes_project 4 59356830 59358318 + Prpf4 protein_coding processed_transcript MGP_BALBcJ_T0099876.1 MGP_BALBcJ_G0037912.1 mouse_genomes_project 4 126728544 126728684 + Gm24621 snRNA snRNA MGP_BALBcJ_T0066082.1 MGP_BALBcJ_G0028375.1 mouse_genomes_project 4 76987273 76988417 + MGP_BALBcJ_P0066082 protein_coding protein_coding MGP_BALBcJ_T0010616.1 MGP_BALBcJ_G0008741.1 mouse_genomes_project 4 130939670 130939729 - Mir7227 miRNA miRNA MGP_BALBcJ_T0066017.1 MGP_BALBcJ_G0028360.1 mouse_genomes_project 4 63770130 63785342 + MGP_BALBcJ_P0066017 Tlr4 protein_coding protein_coding MGP_BALBcJ_T0066018.1 MGP_BALBcJ_G0028360.1 mouse_genomes_project 4 63770159 63868385 + MGP_BALBcJ_P0066018 Tlr4 protein_coding protein_coding MGP_BALBcJ_T0066019.1 MGP_BALBcJ_G0028360.1 mouse_genomes_project 4 63770165 63781980 + Tlr4 protein_coding processed_transcript MGP_BALBcJ_T0066020.1 MGP_BALBcJ_G0028360.1 mouse_genomes_project 4 63770748 63782169 + Tlr4 protein_coding processed_transcript MGP_BALBcJ_T0066117.1 MGP_BALBcJ_G0028381.1 mouse_genomes_project 4 79836578 79839973 - MGP_BALBcJ_P0066117 Cer1 protein_coding protein_coding MGP_BALBcJ_T0066374.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94543869 94560881 - E130114P18Rik protein_coding processed_transcript MGP_BALBcJ_T0066375.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94543869 94560857 - E130114P18Rik protein_coding processed_transcript MGP_BALBcJ_T0066376.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94543869 94560897 - E130114P18Rik protein_coding processed_transcript MGP_BALBcJ_T0066377.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94543869 94560890 - MGP_BALBcJ_P0066377 E130114P18Rik protein_coding protein_coding MGP_BALBcJ_T0066378.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94543869 94560868 - MGP_BALBcJ_P0066378 E130114P18Rik protein_coding protein_coding MGP_BALBcJ_T0066379.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94543869 94755831 - MGP_BALBcJ_P0066379 E130114P18Rik protein_coding protein_coding MGP_BALBcJ_T0066380.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94544926 94667820 - MGP_BALBcJ_P0066380 E130114P18Rik protein_coding protein_coding MGP_BALBcJ_T0066381.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94552144 94560873 - E130114P18Rik protein_coding processed_transcript MGP_BALBcJ_T0066382.1 MGP_BALBcJ_G0028450.1 mouse_genomes_project 4 94656348 94755861 - E130114P18Rik protein_coding processed_transcript MGP_BALBcJ_T0068443.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131367971 131422079 - MGP_BALBcJ_P0068443 Cep85 protein_coding protein_coding MGP_BALBcJ_T0068444.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131367979 131421948 - MGP_BALBcJ_P0068444 Cep85 protein_coding protein_coding MGP_BALBcJ_T0068445.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131369208 131370691 - Cep85 protein_coding processed_transcript MGP_BALBcJ_T0068446.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131370280 131377315 - Cep85 protein_coding retained_intron MGP_BALBcJ_T0068447.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131392378 131394592 - Cep85 protein_coding retained_intron MGP_BALBcJ_T0068448.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131396010 131397033 - Cep85 protein_coding processed_transcript MGP_BALBcJ_T0068449.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131396206 131422052 - MGP_BALBcJ_P0068449 Cep85 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068450.1 MGP_BALBcJ_G0028896.1 mouse_genomes_project 4 131407427 131422018 - Cep85 protein_coding retained_intron MGP_BALBcJ_T0065194.1 MGP_BALBcJ_G0028165.1 mouse_genomes_project 4 39459689 39460899 - MGP_BALBcJ_P0065194 protein_coding protein_coding MGP_BALBcJ_T0014560.1 MGP_BALBcJ_G0012657.1 mouse_genomes_project 4 60853676 60854221 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067367.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115472533 115478945 + MGP_BALBcJ_P0067367 Med8 protein_coding protein_coding MGP_BALBcJ_T0067368.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115472551 115478276 + MGP_BALBcJ_P0067368 Med8 protein_coding protein_coding MGP_BALBcJ_T0067369.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115472552 115477033 + Med8 protein_coding processed_transcript MGP_BALBcJ_T0067370.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115472577 115478279 + MGP_BALBcJ_P0067370 Med8 protein_coding protein_coding MGP_BALBcJ_T0067371.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115473544 115474993 + Med8 protein_coding processed_transcript MGP_BALBcJ_T0067372.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115474633 115475714 + Med8 protein_coding processed_transcript MGP_BALBcJ_T0067373.1 MGP_BALBcJ_G0028648.1 mouse_genomes_project 4 115474824 115477243 + Med8 protein_coding processed_transcript MGP_BALBcJ_T0069046.1 MGP_BALBcJ_G0029042.1 mouse_genomes_project 4 139271972 139276460 + Casp9 protein_coding processed_transcript MGP_BALBcJ_T0069047.1 MGP_BALBcJ_G0029042.1 mouse_genomes_project 4 139272070 139280038 + MGP_BALBcJ_P0069047 Casp9 protein_coding protein_coding MGP_BALBcJ_T0069048.1 MGP_BALBcJ_G0029042.1 mouse_genomes_project 4 139272204 139274947 + Casp9 protein_coding processed_transcript MGP_BALBcJ_T0069049.1 MGP_BALBcJ_G0029042.1 mouse_genomes_project 4 139272215 139290568 + MGP_BALBcJ_P0069049 Casp9 protein_coding protein_coding MGP_BALBcJ_T0069050.1 MGP_BALBcJ_G0029042.1 mouse_genomes_project 4 139289438 139290598 + Casp9 protein_coding processed_transcript MGP_BALBcJ_T0068452.1 MGP_BALBcJ_G0028898.1 mouse_genomes_project 4 131447456 131464676 - MGP_BALBcJ_P0068452 Catsper4 protein_coding protein_coding MGP_BALBcJ_T0068453.1 MGP_BALBcJ_G0028898.1 mouse_genomes_project 4 131447456 131464676 - MGP_BALBcJ_P0068453 Catsper4 protein_coding protein_coding MGP_BALBcJ_T0068454.1 MGP_BALBcJ_G0028898.1 mouse_genomes_project 4 131463010 131464665 - MGP_BALBcJ_P0068454 Catsper4 protein_coding protein_coding MGP_BALBcJ_T0068455.1 MGP_BALBcJ_G0028898.1 mouse_genomes_project 4 131463790 131464643 - Catsper4 protein_coding processed_transcript MGP_BALBcJ_T0066735.1 MGP_BALBcJ_G0028523.1 mouse_genomes_project 4 104666302 104676120 - MGP_BALBcJ_P0066735 protein_coding unknown_likely_coding MGP_BALBcJ_T0066736.1 MGP_BALBcJ_G0028523.1 mouse_genomes_project 4 104666308 104673528 - MGP_BALBcJ_P0066736 protein_coding protein_coding MGP_BALBcJ_T0066737.1 MGP_BALBcJ_G0028523.1 mouse_genomes_project 4 104666922 104670901 - protein_coding retained_intron MGP_BALBcJ_T0065383.1 MGP_BALBcJ_G0028192.1 mouse_genomes_project 4 40315014 40316293 - MGP_BALBcJ_P0065383 Msmp protein_coding protein_coding MGP_BALBcJ_T0066603.1 MGP_BALBcJ_G0028499.1 mouse_genomes_project 4 103306814 103431547 + MGP_BALBcJ_P0066603 Usp24 protein_coding protein_coding MGP_BALBcJ_T0066604.1 MGP_BALBcJ_G0028499.1 mouse_genomes_project 4 103306821 103354127 + Usp24 protein_coding retained_intron MGP_BALBcJ_T0066605.1 MGP_BALBcJ_G0028499.1 mouse_genomes_project 4 103306835 103431552 + MGP_BALBcJ_P0066605 Usp24 protein_coding protein_coding MGP_BALBcJ_T0066606.1 MGP_BALBcJ_G0028499.1 mouse_genomes_project 4 103418733 103421085 + Usp24 protein_coding processed_transcript MGP_BALBcJ_T0065965.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60137261 60217831 + Col27a1 protein_coding retained_intron MGP_BALBcJ_T0065966.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60138669 60199808 + Col27a1 protein_coding retained_intron MGP_BALBcJ_T0065967.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60138692 60259599 + MGP_BALBcJ_P0065967 Col27a1 protein_coding protein_coding MGP_BALBcJ_T0065968.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60139083 60259598 + MGP_BALBcJ_P0065968 Col27a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0065969.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60157522 60258321 + MGP_BALBcJ_P0065969 Col27a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065970.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60207392 60258328 + MGP_BALBcJ_P0065970 Col27a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065971.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60208238 60258357 + Col27a1 protein_coding retained_intron MGP_BALBcJ_T0065972.1 MGP_BALBcJ_G0028344.1 mouse_genomes_project 4 60255612 60258746 + Col27a1 protein_coding processed_transcript MGP_BALBcJ_T0068008.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885324 126892017 + MGP_BALBcJ_P0068008 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068009.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885324 126893135 + MGP_BALBcJ_P0068009 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068010.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885325 126904426 + MGP_BALBcJ_P0068010 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068011.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885336 126893546 + MGP_BALBcJ_P0068011 Tmem234 protein_coding protein_coding MGP_BALBcJ_T0068012.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885337 126892006 + MGP_BALBcJ_P0068012 Tmem234 protein_coding protein_coding MGP_BALBcJ_T0068013.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885343 126892196 + MGP_BALBcJ_P0068013 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068014.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885347 126892041 + MGP_BALBcJ_P0068014 Tmem234 protein_coding protein_coding MGP_BALBcJ_T0068015.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885347 126892275 + MGP_BALBcJ_P0068015 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068016.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885347 126908694 + MGP_BALBcJ_P0068016 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068017.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885351 126892284 + MGP_BALBcJ_P0068017 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068018.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885356 126893539 + MGP_BALBcJ_P0068018 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068019.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885357 126891621 + MGP_BALBcJ_P0068019 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068020.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885358 126892319 + Tmem234 protein_coding retained_intron MGP_BALBcJ_T0068021.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885359 126891638 + MGP_BALBcJ_P0068021 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068022.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885360 126887356 + Tmem234 protein_coding processed_transcript MGP_BALBcJ_T0068023.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885363 126886106 + MGP_BALBcJ_P0068023 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068024.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885639 126892152 + MGP_BALBcJ_P0068024 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068025.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885639 126886587 + MGP_BALBcJ_P0068025 Tmem234 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068026.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885744 126886407 + Tmem234 protein_coding retained_intron MGP_BALBcJ_T0068027.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126885848 126886874 + Tmem234 protein_coding retained_intron MGP_BALBcJ_T0068028.1 MGP_BALBcJ_G0028813.1 mouse_genomes_project 4 126886667 126891789 + Tmem234 protein_coding retained_intron MGP_BALBcJ_T0067051.1 MGP_BALBcJ_G0028590.1 mouse_genomes_project 4 112807213 112820162 + MGP_BALBcJ_P0067051 Atpaf1 protein_coding protein_coding MGP_BALBcJ_T0067052.1 MGP_BALBcJ_G0028590.1 mouse_genomes_project 4 112807215 112830125 + MGP_BALBcJ_P0067052 Atpaf1 protein_coding protein_coding MGP_BALBcJ_T0067053.1 MGP_BALBcJ_G0028590.1 mouse_genomes_project 4 112807453 112832081 + MGP_BALBcJ_P0067053 Atpaf1 protein_coding protein_coding MGP_BALBcJ_T0067054.1 MGP_BALBcJ_G0028590.1 mouse_genomes_project 4 112807614 112832074 + MGP_BALBcJ_P0067054 Atpaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067055.1 MGP_BALBcJ_G0028590.1 mouse_genomes_project 4 112822540 112836522 + MGP_BALBcJ_P0067055 Atpaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065149.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38570010 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065150.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38576038 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065151.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38576601 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065152.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38576102 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065153.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38576598 - MGP_BALBcJ_P0065153 Ccl27a protein_coding protein_coding MGP_BALBcJ_T0065154.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38576643 - MGP_BALBcJ_P0065154 Ccl27a protein_coding protein_coding MGP_BALBcJ_T0065155.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38571288 - MGP_BALBcJ_P0065155 Ccl27a protein_coding protein_coding MGP_BALBcJ_T0065156.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569207 38569965 - MGP_BALBcJ_P0065156 Ccl27a protein_coding protein_coding MGP_BALBcJ_T0065159.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569218 38569953 - MGP_BALBcJ_P0065159 Ccl27a protein_coding protein_coding MGP_BALBcJ_T0065164.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569609 38576671 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065165.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38569643 38576438 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065170.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38575688 38576748 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065171.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38575688 38576670 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0065172.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38575688 38576659 - MGP_BALBcJ_P0065172 Ccl27a protein_coding protein_coding MGP_BALBcJ_T0065178.1 MGP_BALBcJ_G0028146.1 mouse_genomes_project 4 38575915 38576698 - Ccl27a protein_coding processed_transcript MGP_BALBcJ_T0011564.1 MGP_BALBcJ_G0009689.1 mouse_genomes_project 4 130359642 130359930 - Gm24636 misc_RNA misc_RNA MGP_BALBcJ_T0066979.1 MGP_BALBcJ_G0028564.1 mouse_genomes_project 4 108968307 108978478 + MGP_BALBcJ_P0066979 Skint7 protein_coding protein_coding MGP_BALBcJ_T0066980.1 MGP_BALBcJ_G0028564.1 mouse_genomes_project 4 108968311 108982149 + MGP_BALBcJ_P0066980 Skint7 protein_coding protein_coding MGP_BALBcJ_T0066981.1 MGP_BALBcJ_G0028564.1 mouse_genomes_project 4 108968311 108976550 + MGP_BALBcJ_P0066981 Skint7 protein_coding protein_coding MGP_BALBcJ_T0066982.1 MGP_BALBcJ_G0028564.1 mouse_genomes_project 4 108977389 108979923 + Skint7 protein_coding retained_intron MGP_BALBcJ_T0068496.1 MGP_BALBcJ_G0028910.1 mouse_genomes_project 4 131707406 131713142 + MGP_BALBcJ_P0068496 Stmn1 protein_coding protein_coding MGP_BALBcJ_T0068497.1 MGP_BALBcJ_G0028910.1 mouse_genomes_project 4 131707485 131709775 + Stmn1 protein_coding processed_transcript MGP_BALBcJ_T0068498.1 MGP_BALBcJ_G0028910.1 mouse_genomes_project 4 131707492 131712225 + MGP_BALBcJ_P0068498 Stmn1 protein_coding protein_coding MGP_BALBcJ_T0068499.1 MGP_BALBcJ_G0028910.1 mouse_genomes_project 4 131707495 131712964 + MGP_BALBcJ_P0068499 Stmn1 protein_coding protein_coding MGP_BALBcJ_T0068500.1 MGP_BALBcJ_G0028910.1 mouse_genomes_project 4 131708833 131712799 + MGP_BALBcJ_P0068500 Stmn1 protein_coding protein_coding MGP_BALBcJ_T0066890.1 MGP_BALBcJ_G0028550.1 mouse_genomes_project 4 106245816 106281537 + MGP_BALBcJ_P0066890 Calr4 protein_coding protein_coding MGP_BALBcJ_T0066891.1 MGP_BALBcJ_G0028550.1 mouse_genomes_project 4 106262206 106281787 + MGP_BALBcJ_P0066891 Calr4 protein_coding protein_coding MGP_BALBcJ_T0066892.1 MGP_BALBcJ_G0028550.1 mouse_genomes_project 4 106263353 106281787 + MGP_BALBcJ_P0066892 Calr4 protein_coding protein_coding MGP_BALBcJ_T0066893.1 MGP_BALBcJ_G0028550.1 mouse_genomes_project 4 106272300 106281359 + Calr4 protein_coding processed_transcript MGP_BALBcJ_T0069150.1 MGP_BALBcJ_G0029086.1 mouse_genomes_project 4 144368255 144374509 + MGP_BALBcJ_P0069150 protein_coding protein_coding MGP_BALBcJ_T0014393.1 MGP_BALBcJ_G0012490.1 mouse_genomes_project 4 8117665 8118518 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099892.1 MGP_BALBcJ_G0037928.1 mouse_genomes_project 4 146475444 146475548 + Gm24002 snRNA snRNA MGP_BALBcJ_T0066894.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106307995 106409431 + MGP_BALBcJ_P0066894 Eps15 protein_coding protein_coding MGP_BALBcJ_T0066895.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106308030 106407301 + MGP_BALBcJ_P0066895 Eps15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066896.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106308103 106339406 + MGP_BALBcJ_P0066896 Eps15 protein_coding protein_coding MGP_BALBcJ_T0066897.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106308139 106407084 + MGP_BALBcJ_P0066897 Eps15 protein_coding protein_coding MGP_BALBcJ_T0066898.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106308139 106407084 + MGP_BALBcJ_P0066898 Eps15 protein_coding protein_coding MGP_BALBcJ_T0066899.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106330948 106332411 + Eps15 protein_coding retained_intron MGP_BALBcJ_T0066900.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106335650 106339709 + Eps15 protein_coding retained_intron MGP_BALBcJ_T0066901.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106370727 106408180 + MGP_BALBcJ_P0066901 Eps15 protein_coding protein_coding MGP_BALBcJ_T0066902.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106370921 106388496 + Eps15 protein_coding retained_intron MGP_BALBcJ_T0066903.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106392133 106407397 + MGP_BALBcJ_P0066903 Eps15 protein_coding protein_coding MGP_BALBcJ_T0066904.1 MGP_BALBcJ_G0028551.1 mouse_genomes_project 4 106392177 106404487 + Eps15 protein_coding processed_transcript MGP_BALBcJ_T0067726.1 MGP_BALBcJ_G0028750.1 mouse_genomes_project 4 123249534 123258136 + MGP_BALBcJ_P0067726 Mrps15 protein_coding protein_coding MGP_BALBcJ_T0067727.1 MGP_BALBcJ_G0028750.1 mouse_genomes_project 4 123249586 123254575 + Mrps15 protein_coding processed_transcript MGP_BALBcJ_T0067728.1 MGP_BALBcJ_G0028750.1 mouse_genomes_project 4 123249843 123253093 + Mrps15 protein_coding processed_transcript MGP_BALBcJ_T0066791.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105172677 105186532 + MGP_BALBcJ_P0066791 Echdc2 protein_coding protein_coding MGP_BALBcJ_T0066792.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105172706 105186295 + MGP_BALBcJ_P0066792 Echdc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066793.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105172706 105186531 + MGP_BALBcJ_P0066793 Echdc2 protein_coding protein_coding MGP_BALBcJ_T0066794.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105172728 105186530 + MGP_BALBcJ_P0066794 Echdc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066795.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105172758 105186292 + MGP_BALBcJ_P0066795 Echdc2 protein_coding protein_coding MGP_BALBcJ_T0066796.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105176933 105186156 + MGP_BALBcJ_P0066796 Echdc2 protein_coding protein_coding MGP_BALBcJ_T0066797.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105177005 105182628 + Echdc2 protein_coding retained_intron MGP_BALBcJ_T0066798.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105177361 105186531 + Echdc2 protein_coding processed_transcript MGP_BALBcJ_T0066799.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105177372 105181072 + Echdc2 protein_coding processed_transcript MGP_BALBcJ_T0066800.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105179380 105186383 + MGP_BALBcJ_P0066800 Echdc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066801.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105179883 105184323 + Echdc2 protein_coding retained_intron MGP_BALBcJ_T0066802.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105180910 105186283 + Echdc2 protein_coding retained_intron MGP_BALBcJ_T0066803.1 MGP_BALBcJ_G0028531.1 mouse_genomes_project 4 105181030 105186312 + MGP_BALBcJ_P0066803 Echdc2 protein_coding protein_coding MGP_BALBcJ_T0010568.1 MGP_BALBcJ_G0008693.1 mouse_genomes_project 4 33391153 33391230 - Mir873a miRNA miRNA MGP_BALBcJ_T0068126.1 MGP_BALBcJ_G0028831.1 mouse_genomes_project 4 127614736 127621605 + MGP_BALBcJ_P0068126 Fabp3 protein_coding protein_coding MGP_BALBcJ_T0099866.1 MGP_BALBcJ_G0037902.1 mouse_genomes_project 4 114237156 114237272 + Gm23143 snRNA snRNA MGP_BALBcJ_T0014685.1 MGP_BALBcJ_G0012782.1 mouse_genomes_project 4 105745242 105745798 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069194.1 MGP_BALBcJ_G0029099.1 mouse_genomes_project 4 146059452 146069840 + Mad2l2 protein_coding processed_transcript MGP_BALBcJ_T0069195.1 MGP_BALBcJ_G0029099.1 mouse_genomes_project 4 146069230 146074170 + MGP_BALBcJ_P0069195 Mad2l2 protein_coding protein_coding MGP_BALBcJ_T0069196.1 MGP_BALBcJ_G0029099.1 mouse_genomes_project 4 146069772 146074169 + MGP_BALBcJ_P0069196 Mad2l2 protein_coding protein_coding MGP_BALBcJ_T0069197.1 MGP_BALBcJ_G0029099.1 mouse_genomes_project 4 146069810 146072509 + Mad2l2 protein_coding retained_intron MGP_BALBcJ_T0069198.1 MGP_BALBcJ_G0029099.1 mouse_genomes_project 4 146069843 146074733 + MGP_BALBcJ_P0069198 Mad2l2 protein_coding protein_coding MGP_BALBcJ_T0069199.1 MGP_BALBcJ_G0029099.1 mouse_genomes_project 4 146073838 146074500 + Mad2l2 protein_coding retained_intron MGP_BALBcJ_T0065184.1 MGP_BALBcJ_G0028158.1 mouse_genomes_project 4 39028185 39030446 + MGP_BALBcJ_P0065184 protein_coding protein_coding MGP_BALBcJ_T0064783.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18284113 18299671 + Usp45 protein_coding processed_transcript MGP_BALBcJ_T0064784.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18293464 18302019 + Usp45 protein_coding retained_intron MGP_BALBcJ_T0064785.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18293475 18356543 + MGP_BALBcJ_P0064785 Usp45 protein_coding protein_coding MGP_BALBcJ_T0064786.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18293475 18356545 + MGP_BALBcJ_P0064786 Usp45 protein_coding protein_coding MGP_BALBcJ_T0064787.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18293484 18315663 + MGP_BALBcJ_P0064787 Usp45 protein_coding protein_coding MGP_BALBcJ_T0064788.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18293501 18356545 + MGP_BALBcJ_P0064788 Usp45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064789.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18298931 18356543 + MGP_BALBcJ_P0064789 Usp45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064790.1 MGP_BALBcJ_G0028061.1 mouse_genomes_project 4 18301902 18333912 + MGP_BALBcJ_P0064790 Usp45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067856.1 MGP_BALBcJ_G0028776.1 mouse_genomes_project 4 124390986 124459895 + MGP_BALBcJ_P0067856 Dlgap3 protein_coding protein_coding MGP_BALBcJ_T0067857.1 MGP_BALBcJ_G0028776.1 mouse_genomes_project 4 124394628 124459895 + MGP_BALBcJ_P0067857 Dlgap3 protein_coding protein_coding MGP_BALBcJ_T0067858.1 MGP_BALBcJ_G0028776.1 mouse_genomes_project 4 124416526 124459241 + MGP_BALBcJ_P0067858 Dlgap3 protein_coding protein_coding MGP_BALBcJ_T0067859.1 MGP_BALBcJ_G0028776.1 mouse_genomes_project 4 124425734 124436958 + Dlgap3 protein_coding processed_transcript MGP_BALBcJ_T0065749.1 MGP_BALBcJ_G0028284.1 mouse_genomes_project 4 51733864 51800830 + MGP_BALBcJ_P0065749 protein_coding protein_coding MGP_BALBcJ_T0065750.1 MGP_BALBcJ_G0028284.1 mouse_genomes_project 4 51799935 51876088 + MGP_BALBcJ_P0065750 protein_coding unknown_likely_coding MGP_BALBcJ_T0065751.1 MGP_BALBcJ_G0028284.1 mouse_genomes_project 4 51803896 51873872 + MGP_BALBcJ_P0065751 protein_coding protein_coding MGP_BALBcJ_T0065752.1 MGP_BALBcJ_G0028284.1 mouse_genomes_project 4 51804010 51873844 + MGP_BALBcJ_P0065752 protein_coding protein_coding MGP_BALBcJ_T0067224.1 MGP_BALBcJ_G0028623.1 mouse_genomes_project 4 114054282 114109479 + MGP_BALBcJ_P0067224 Eif2b3 protein_coding protein_coding MGP_BALBcJ_T0067225.1 MGP_BALBcJ_G0028623.1 mouse_genomes_project 4 114054282 114122906 + MGP_BALBcJ_P0067225 Eif2b3 protein_coding protein_coding MGP_BALBcJ_T0067226.1 MGP_BALBcJ_G0028623.1 mouse_genomes_project 4 114080224 114095409 + Eif2b3 protein_coding processed_transcript MGP_BALBcJ_T0067227.1 MGP_BALBcJ_G0028623.1 mouse_genomes_project 4 114102704 114110521 + Eif2b3 protein_coding processed_transcript MGP_BALBcJ_T0067228.1 MGP_BALBcJ_G0028623.1 mouse_genomes_project 4 114103696 114123357 + Eif2b3 protein_coding processed_transcript MGP_BALBcJ_T0067229.1 MGP_BALBcJ_G0028623.1 mouse_genomes_project 4 114117723 114122899 + Eif2b3 protein_coding processed_transcript MGP_BALBcJ_T0004596.1 MGP_BALBcJ_G0003986.1 mouse_genomes_project 4 153119617 153123001 + Gm10564 antisense antisense MGP_BALBcJ_T0069110.1 MGP_BALBcJ_G0029066.1 mouse_genomes_project 4 141832590 141841493 - MGP_BALBcJ_P0069110 protein_coding protein_coding MGP_BALBcJ_T0069111.1 MGP_BALBcJ_G0029066.1 mouse_genomes_project 4 141832590 141841420 - MGP_BALBcJ_P0069111 protein_coding protein_coding MGP_BALBcJ_T0069112.1 MGP_BALBcJ_G0029066.1 mouse_genomes_project 4 141832590 141841466 - MGP_BALBcJ_P0069112 protein_coding protein_coding MGP_BALBcJ_T0069113.1 MGP_BALBcJ_G0029066.1 mouse_genomes_project 4 141832940 141841767 - MGP_BALBcJ_P0069113 protein_coding protein_coding MGP_BALBcJ_T0069114.1 MGP_BALBcJ_G0029066.1 mouse_genomes_project 4 141832940 141841900 - MGP_BALBcJ_P0069114 protein_coding protein_coding MGP_BALBcJ_T0014478.1 MGP_BALBcJ_G0012575.1 mouse_genomes_project 4 30123193 30123592 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066046.1 MGP_BALBcJ_G0028368.1 mouse_genomes_project 4 70856121 70858510 - 2310002L09Rik protein_coding processed_transcript MGP_BALBcJ_T0066047.1 MGP_BALBcJ_G0028368.1 mouse_genomes_project 4 70856121 70867874 - MGP_BALBcJ_P0066047 2310002L09Rik protein_coding protein_coding MGP_BALBcJ_T0066048.1 MGP_BALBcJ_G0028368.1 mouse_genomes_project 4 70858287 70867873 - MGP_BALBcJ_P0066048 2310002L09Rik protein_coding protein_coding MGP_BALBcJ_T0069222.1 MGP_BALBcJ_G0029104.1 mouse_genomes_project 4 146370588 146380818 - MGP_BALBcJ_P0069222 Ubiad1 protein_coding protein_coding MGP_BALBcJ_T0069223.1 MGP_BALBcJ_G0029104.1 mouse_genomes_project 4 146372583 146380808 - Ubiad1 protein_coding processed_transcript MGP_BALBcJ_T0007974.1 MGP_BALBcJ_G0006503.1 mouse_genomes_project 4 134441494 134442374 - 1700037C06Rik lincRNA lincRNA MGP_BALBcJ_T0067812.1 MGP_BALBcJ_G0028768.1 mouse_genomes_project 4 123936819 123957498 - MGP_BALBcJ_P0067812 Tfap2e protein_coding protein_coding MGP_BALBcJ_T0014744.1 MGP_BALBcJ_G0012841.1 mouse_genomes_project 4 123740091 123740434 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099880.1 MGP_BALBcJ_G0037916.1 mouse_genomes_project 4 129730614 129730718 - Gm24762 snRNA snRNA MGP_BALBcJ_T0014458.1 MGP_BALBcJ_G0012555.1 mouse_genomes_project 4 25148539 25149298 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004600.1 MGP_BALBcJ_G0003989.1 mouse_genomes_project 4 153852179 153860413 + Atad3aos antisense antisense MGP_BALBcJ_T0004601.1 MGP_BALBcJ_G0003989.1 mouse_genomes_project 4 153852193 153853267 + Atad3aos antisense antisense MGP_BALBcJ_T0004602.1 MGP_BALBcJ_G0003989.1 mouse_genomes_project 4 153852211 153854556 + Atad3aos antisense antisense MGP_BALBcJ_T0004603.1 MGP_BALBcJ_G0003989.1 mouse_genomes_project 4 153852222 153854567 + Atad3aos antisense antisense MGP_BALBcJ_T0067211.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114023422 114027838 - MGP_BALBcJ_P0067211 Urod protein_coding protein_coding MGP_BALBcJ_T0067212.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114023641 114025090 - Urod protein_coding retained_intron MGP_BALBcJ_T0067213.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114023709 114025311 - Urod protein_coding retained_intron MGP_BALBcJ_T0067214.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114024500 114027789 - Urod protein_coding retained_intron MGP_BALBcJ_T0067215.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114024885 114027782 - MGP_BALBcJ_P0067215 Urod protein_coding protein_coding MGP_BALBcJ_T0067216.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114025708 114027771 - Urod protein_coding retained_intron MGP_BALBcJ_T0067217.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114026208 114027770 - Urod protein_coding retained_intron MGP_BALBcJ_T0067218.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114026377 114027022 - Urod protein_coding processed_transcript MGP_BALBcJ_T0067219.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114026532 114027765 - Urod protein_coding retained_intron MGP_BALBcJ_T0067220.1 MGP_BALBcJ_G0028621.1 mouse_genomes_project 4 114026704 114027805 - Urod protein_coding retained_intron MGP_BALBcJ_T0014459.1 MGP_BALBcJ_G0012556.1 mouse_genomes_project 4 25183878 25184796 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064959.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31465448 31475134 - MGP_BALBcJ_P0064959 Smim8 protein_coding protein_coding MGP_BALBcJ_T0064960.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31465448 31475149 - MGP_BALBcJ_P0064960 Smim8 protein_coding protein_coding MGP_BALBcJ_T0064961.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31465448 31475208 - MGP_BALBcJ_P0064961 Smim8 protein_coding protein_coding MGP_BALBcJ_T0064962.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31465448 31475122 - MGP_BALBcJ_P0064962 Smim8 protein_coding protein_coding MGP_BALBcJ_T0064963.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31465448 31475055 - MGP_BALBcJ_P0064963 Smim8 protein_coding protein_coding MGP_BALBcJ_T0064964.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31465459 31475116 - Smim8 protein_coding processed_transcript MGP_BALBcJ_T0064965.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31467672 31475140 - Smim8 protein_coding retained_intron MGP_BALBcJ_T0064966.1 MGP_BALBcJ_G0028101.1 mouse_genomes_project 4 31468030 31475003 - Smim8 protein_coding processed_transcript MGP_BALBcJ_T0065082.1 MGP_BALBcJ_G0028132.1 mouse_genomes_project 4 38273504 38280976 - MGP_BALBcJ_P0065082 AI464131 protein_coding protein_coding MGP_BALBcJ_T0065083.1 MGP_BALBcJ_G0028132.1 mouse_genomes_project 4 38277394 38280568 - MGP_BALBcJ_P0065083 AI464131 protein_coding protein_coding MGP_BALBcJ_T0064705.1 MGP_BALBcJ_G0028033.1 mouse_genomes_project 4 9405738 9468295 + MGP_BALBcJ_P0064705 Triqk protein_coding protein_coding MGP_BALBcJ_T0064706.1 MGP_BALBcJ_G0028033.1 mouse_genomes_project 4 9405758 9470939 + MGP_BALBcJ_P0064706 Triqk protein_coding protein_coding MGP_BALBcJ_T0064707.1 MGP_BALBcJ_G0028033.1 mouse_genomes_project 4 9416867 9468492 + Triqk protein_coding processed_transcript MGP_BALBcJ_T0018019.1 MGP_BALBcJ_G0015489.1 mouse_genomes_project 4 69143500 69157521 + C630043F03Rik processed_transcript processed_transcript MGP_BALBcJ_T0065856.1 MGP_BALBcJ_G0028311.1 mouse_genomes_project 4 55831850 55868002 + MGP_BALBcJ_P0065856 Gm20503 protein_coding protein_coding MGP_BALBcJ_T0014746.1 MGP_BALBcJ_G0012843.1 mouse_genomes_project 4 124016588 124017551 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007816.1 MGP_BALBcJ_G0006389.1 mouse_genomes_project 4 48763984 48850949 - C630028M04Rik lincRNA lincRNA MGP_BALBcJ_T0068642.1 MGP_BALBcJ_G0028943.1 mouse_genomes_project 4 133437525 133439432 + MGP_BALBcJ_P0068642 Id3 protein_coding protein_coding MGP_BALBcJ_T0068643.1 MGP_BALBcJ_G0028943.1 mouse_genomes_project 4 133437891 133438748 + Id3 protein_coding retained_intron MGP_BALBcJ_T0068644.1 MGP_BALBcJ_G0028943.1 mouse_genomes_project 4 133439013 133439795 + Id3 protein_coding processed_transcript MGP_BALBcJ_T0007864.1 MGP_BALBcJ_G0006427.1 mouse_genomes_project 4 87199527 87204021 + Gm12629 lincRNA lincRNA MGP_BALBcJ_T0065683.1 MGP_BALBcJ_G0028263.1 mouse_genomes_project 4 46347559 46363109 - MGP_BALBcJ_P0065683 Aldob protein_coding protein_coding MGP_BALBcJ_T0065684.1 MGP_BALBcJ_G0028263.1 mouse_genomes_project 4 46348598 46350431 - Aldob protein_coding processed_transcript MGP_BALBcJ_T0065685.1 MGP_BALBcJ_G0028263.1 mouse_genomes_project 4 46350101 46351451 - Aldob protein_coding processed_transcript MGP_BALBcJ_T0102541.1 MGP_BALBcJ_G0040357.1 mouse_genomes_project 4 118873877 118893505 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0069729.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153342942 153448166 - MGP_BALBcJ_P0069729 Prkcz protein_coding protein_coding MGP_BALBcJ_T0069730.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153344550 153448329 - MGP_BALBcJ_P0069730 Prkcz protein_coding protein_coding MGP_BALBcJ_T0069731.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153344929 153351165 - Prkcz protein_coding processed_transcript MGP_BALBcJ_T0069732.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153353962 153355872 - Prkcz protein_coding processed_transcript MGP_BALBcJ_T0069733.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153373934 153431781 - MGP_BALBcJ_P0069733 Prkcz protein_coding protein_coding MGP_BALBcJ_T0069734.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153373934 153431564 - MGP_BALBcJ_P0069734 Prkcz protein_coding protein_coding MGP_BALBcJ_T0069735.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153373937 153431661 - Prkcz protein_coding processed_transcript MGP_BALBcJ_T0069736.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153377714 153384616 - Prkcz protein_coding processed_transcript MGP_BALBcJ_T0069737.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153377789 153431139 - Prkcz protein_coding processed_transcript MGP_BALBcJ_T0069738.1 MGP_BALBcJ_G0029192.1 mouse_genomes_project 4 153442764 153448308 - MGP_BALBcJ_P0069738 Prkcz protein_coding protein_coding MGP_BALBcJ_T0099875.1 MGP_BALBcJ_G0037911.1 mouse_genomes_project 4 124508560 124508663 - Gm22221 snRNA snRNA MGP_BALBcJ_T0069041.1 MGP_BALBcJ_G0029039.1 mouse_genomes_project 4 139158653 139160402 - MGP_BALBcJ_P0069041 protein_coding protein_coding MGP_BALBcJ_T0065008.1 MGP_BALBcJ_G0028113.1 mouse_genomes_project 4 37016696 37026568 - MGP_BALBcJ_P0065008 Ndufb6 protein_coding protein_coding MGP_BALBcJ_T0065009.1 MGP_BALBcJ_G0028113.1 mouse_genomes_project 4 37016770 37026556 - MGP_BALBcJ_P0065009 Ndufb6 protein_coding protein_coding MGP_BALBcJ_T0069286.1 MGP_BALBcJ_G0029114.1 mouse_genomes_project 4 147054949 147070543 + MGP_BALBcJ_P0069286 Dffa protein_coding protein_coding MGP_BALBcJ_T0069287.1 MGP_BALBcJ_G0029114.1 mouse_genomes_project 4 147054949 147068652 + MGP_BALBcJ_P0069287 Dffa protein_coding protein_coding MGP_BALBcJ_T0069288.1 MGP_BALBcJ_G0029114.1 mouse_genomes_project 4 147059213 147059679 + Dffa protein_coding processed_transcript MGP_BALBcJ_T0010557.1 MGP_BALBcJ_G0008682.1 mouse_genomes_project 4 9743548 9743614 - Gm26250 miRNA miRNA MGP_BALBcJ_T0101106.1 MGP_BALBcJ_G0039142.1 mouse_genomes_project 4 22024772 22024897 - Gm25975 snoRNA snoRNA MGP_BALBcJ_T0069117.1 MGP_BALBcJ_G0029069.1 mouse_genomes_project 4 142019455 142022672 + MGP_BALBcJ_P0069117 protein_coding protein_coding MGP_BALBcJ_T0067087.1 MGP_BALBcJ_G0028597.1 mouse_genomes_project 4 113051392 113072044 - MGP_BALBcJ_P0067087 protein_coding protein_coding MGP_BALBcJ_T0067088.1 MGP_BALBcJ_G0028597.1 mouse_genomes_project 4 113051555 113066658 - MGP_BALBcJ_P0067088 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067089.1 MGP_BALBcJ_G0028597.1 mouse_genomes_project 4 113052457 113071548 - MGP_BALBcJ_P0067089 protein_coding protein_coding MGP_BALBcJ_T0067090.1 MGP_BALBcJ_G0028597.1 mouse_genomes_project 4 113058786 113064398 - protein_coding processed_transcript MGP_BALBcJ_T0067091.1 MGP_BALBcJ_G0028597.1 mouse_genomes_project 4 113063272 113066527 - protein_coding retained_intron MGP_BALBcJ_T0067092.1 MGP_BALBcJ_G0028597.1 mouse_genomes_project 4 113066627 113067564 - protein_coding processed_transcript MGP_BALBcJ_T0014761.1 MGP_BALBcJ_G0012858.1 mouse_genomes_project 4 131104540 131104723 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068358.1 MGP_BALBcJ_G0028879.1 mouse_genomes_project 4 130741146 130754962 - MGP_BALBcJ_P0068358 Nudc protein_coding protein_coding MGP_BALBcJ_T0068359.1 MGP_BALBcJ_G0028879.1 mouse_genomes_project 4 130742125 130742421 - Nudc protein_coding processed_transcript MGP_BALBcJ_T0068360.1 MGP_BALBcJ_G0028879.1 mouse_genomes_project 4 130743223 130744887 - Nudc protein_coding processed_transcript MGP_BALBcJ_T0007793.1 MGP_BALBcJ_G0006367.1 mouse_genomes_project 4 25668007 25689495 + Gm11917 lincRNA lincRNA MGP_BALBcJ_T0007877.1 MGP_BALBcJ_G0006439.1 mouse_genomes_project 4 97034814 97047635 + Gm12702 lincRNA lincRNA MGP_BALBcJ_T0067128.1 MGP_BALBcJ_G0028605.1 mouse_genomes_project 4 113252093 113290550 + MGP_BALBcJ_P0067128 Pik3r3 protein_coding protein_coding MGP_BALBcJ_T0067129.1 MGP_BALBcJ_G0028605.1 mouse_genomes_project 4 113252136 113329300 + MGP_BALBcJ_P0067129 Pik3r3 protein_coding protein_coding MGP_BALBcJ_T0067130.1 MGP_BALBcJ_G0028605.1 mouse_genomes_project 4 113252171 113326085 + MGP_BALBcJ_P0067130 Pik3r3 protein_coding protein_coding MGP_BALBcJ_T0014806.1 MGP_BALBcJ_G0012903.1 mouse_genomes_project 4 147092776 147094279 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065109.1 MGP_BALBcJ_G0028139.1 mouse_genomes_project 4 38510817 38512319 - MGP_BALBcJ_P0065109 Rpp25l protein_coding protein_coding MGP_BALBcJ_T0067353.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115261953 115345266 - MGP_BALBcJ_P0067353 Ptprf protein_coding protein_coding MGP_BALBcJ_T0067354.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115261960 115345262 - MGP_BALBcJ_P0067354 Ptprf protein_coding unknown_likely_coding MGP_BALBcJ_T0067355.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115262728 115271419 - Ptprf protein_coding processed_transcript MGP_BALBcJ_T0067356.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115262744 115290176 - MGP_BALBcJ_P0067356 Ptprf protein_coding protein_coding MGP_BALBcJ_T0067357.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115262749 115289747 - MGP_BALBcJ_P0067357 Ptprf protein_coding protein_coding MGP_BALBcJ_T0067358.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115263599 115264481 - Ptprf protein_coding processed_transcript MGP_BALBcJ_T0067359.1 MGP_BALBcJ_G0028646.1 mouse_genomes_project 4 115279869 115284842 - Ptprf protein_coding processed_transcript MGP_BALBcJ_T0099868.1 MGP_BALBcJ_G0037904.1 mouse_genomes_project 4 116621050 116621157 + Rnu6-ps2 snRNA snRNA MGP_BALBcJ_T0014742.1 MGP_BALBcJ_G0012839.1 mouse_genomes_project 4 122202693 122203017 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014595.1 MGP_BALBcJ_G0012692.1 mouse_genomes_project 4 73729567 73729804 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014702.1 MGP_BALBcJ_G0012799.1 mouse_genomes_project 4 113477682 113478099 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066852.1 MGP_BALBcJ_G0028545.1 mouse_genomes_project 4 105863703 105864925 - MGP_BALBcJ_P0066852 A730015C16Rik protein_coding protein_coding MGP_BALBcJ_T0007937.1 MGP_BALBcJ_G0006482.1 mouse_genomes_project 4 126526506 126529660 + Gm12976 lincRNA lincRNA MGP_BALBcJ_T0007938.1 MGP_BALBcJ_G0006482.1 mouse_genomes_project 4 126528254 126529660 + Gm12976 lincRNA lincRNA MGP_BALBcJ_T0068845.1 MGP_BALBcJ_G0028995.1 mouse_genomes_project 4 136493303 136523840 - MGP_BALBcJ_P0068845 Minos1 protein_coding protein_coding MGP_BALBcJ_T0068846.1 MGP_BALBcJ_G0028995.1 mouse_genomes_project 4 136495277 136497442 - Minos1 protein_coding processed_transcript MGP_BALBcJ_T0068847.1 MGP_BALBcJ_G0028995.1 mouse_genomes_project 4 136495309 136502740 - Minos1 protein_coding processed_transcript MGP_BALBcJ_T0068848.1 MGP_BALBcJ_G0028995.1 mouse_genomes_project 4 136495388 136523721 - Minos1 protein_coding processed_transcript MGP_BALBcJ_T0066608.1 MGP_BALBcJ_G0028501.1 mouse_genomes_project 4 103474705 103483503 - MGP_BALBcJ_P0066608 Bsnd protein_coding protein_coding MGP_BALBcJ_T0066855.1 MGP_BALBcJ_G0028547.1 mouse_genomes_project 4 105894997 105957542 + MGP_BALBcJ_P0066855 Rab3b protein_coding protein_coding MGP_BALBcJ_T0066856.1 MGP_BALBcJ_G0028547.1 mouse_genomes_project 4 105895134 105955414 + MGP_BALBcJ_P0066856 Rab3b protein_coding protein_coding MGP_BALBcJ_T0066857.1 MGP_BALBcJ_G0028547.1 mouse_genomes_project 4 105905039 105955417 + MGP_BALBcJ_P0066857 Rab3b protein_coding protein_coding MGP_BALBcJ_T0066858.1 MGP_BALBcJ_G0028547.1 mouse_genomes_project 4 105953328 105955134 + Rab3b protein_coding processed_transcript MGP_BALBcJ_T0069573.1 MGP_BALBcJ_G0029164.1 mouse_genomes_project 4 150505212 150593166 + Nphp4 protein_coding processed_transcript MGP_BALBcJ_T0069574.1 MGP_BALBcJ_G0029164.1 mouse_genomes_project 4 150506401 150592895 + MGP_BALBcJ_P0069574 Nphp4 protein_coding unknown_likely_coding MGP_BALBcJ_T0069575.1 MGP_BALBcJ_G0029164.1 mouse_genomes_project 4 150506684 150519364 + Nphp4 protein_coding processed_transcript MGP_BALBcJ_T0069576.1 MGP_BALBcJ_G0029164.1 mouse_genomes_project 4 150517268 150527145 + Nphp4 protein_coding processed_transcript MGP_BALBcJ_T0069577.1 MGP_BALBcJ_G0029164.1 mouse_genomes_project 4 150531817 150547055 + Nphp4 protein_coding processed_transcript MGP_BALBcJ_T0098373.1 MGP_BALBcJ_G0036427.1 mouse_genomes_project 4 127145123 127146766 + pseudogene pseudogene MGP_BALBcJ_T0101113.1 MGP_BALBcJ_G0039149.1 mouse_genomes_project 4 37981699 37981776 - Gm22888 snoRNA snoRNA MGP_BALBcJ_T0066011.1 MGP_BALBcJ_G0028358.1 mouse_genomes_project 4 62351464 63360761 - MGP_BALBcJ_P0066011 Astn2 protein_coding protein_coding MGP_BALBcJ_T0066012.1 MGP_BALBcJ_G0028358.1 mouse_genomes_project 4 62351464 63360633 - MGP_BALBcJ_P0066012 Astn2 protein_coding protein_coding MGP_BALBcJ_T0069534.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150332399 150343979 - MGP_BALBcJ_P0069534 Rnf207 protein_coding protein_coding MGP_BALBcJ_T0069535.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150332691 150334414 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069536.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150336764 150343829 - MGP_BALBcJ_P0069536 Rnf207 protein_coding protein_coding MGP_BALBcJ_T0069537.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150336937 150338784 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069538.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150337096 150338729 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069539.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150338214 150338781 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069540.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150338773 150343852 - MGP_BALBcJ_P0069540 Rnf207 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069541.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150338783 150341336 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069542.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150339923 150344364 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069543.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150339925 150343990 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069544.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150340256 150343996 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0069545.1 MGP_BALBcJ_G0029160.1 mouse_genomes_project 4 150340831 150341699 - Rnf207 protein_coding retained_intron MGP_BALBcJ_T0067395.1 MGP_BALBcJ_G0028655.1 mouse_genomes_project 4 115611826 115676098 - MGP_BALBcJ_P0067395 Cfap57 protein_coding unknown_likely_coding MGP_BALBcJ_T0067396.1 MGP_BALBcJ_G0028655.1 mouse_genomes_project 4 115611834 115676470 - MGP_BALBcJ_P0067396 Cfap57 protein_coding protein_coding MGP_BALBcJ_T0067397.1 MGP_BALBcJ_G0028655.1 mouse_genomes_project 4 115611979 115676098 - MGP_BALBcJ_P0067397 Cfap57 protein_coding protein_coding MGP_BALBcJ_T0064969.1 MGP_BALBcJ_G0028103.1 mouse_genomes_project 4 31591184 31605573 + MGP_BALBcJ_P0064969 Cga protein_coding protein_coding MGP_BALBcJ_T0064970.1 MGP_BALBcJ_G0028103.1 mouse_genomes_project 4 31591193 31605335 + MGP_BALBcJ_P0064970 Cga protein_coding protein_coding MGP_BALBcJ_T0064971.1 MGP_BALBcJ_G0028103.1 mouse_genomes_project 4 31591193 31605381 + MGP_BALBcJ_P0064971 Cga protein_coding protein_coding MGP_BALBcJ_T0014462.1 MGP_BALBcJ_G0012559.1 mouse_genomes_project 4 25726444 25726623 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066924.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214828 107299242 - MGP_BALBcJ_P0066924 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066925.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214843 107298604 - MGP_BALBcJ_P0066925 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066926.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214843 107304446 - MGP_BALBcJ_P0066926 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066927.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214843 107301983 - MGP_BALBcJ_P0066927 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066928.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214843 107299242 - MGP_BALBcJ_P0066928 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066929.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214843 107357111 - MGP_BALBcJ_P0066929 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066930.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107214843 107298604 - MGP_BALBcJ_P0066930 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066931.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107217464 107234212 - Elavl4 protein_coding processed_transcript MGP_BALBcJ_T0066932.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107224306 107298331 - MGP_BALBcJ_P0066932 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066933.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107236644 107285869 - Elavl4 protein_coding processed_transcript MGP_BALBcJ_T0066934.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107237673 107299242 - MGP_BALBcJ_P0066934 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0066935.1 MGP_BALBcJ_G0028558.1 mouse_genomes_project 4 107263186 107302605 - MGP_BALBcJ_P0066935 Elavl4 protein_coding protein_coding MGP_BALBcJ_T0067178.1 MGP_BALBcJ_G0028614.1 mouse_genomes_project 4 113730149 113738597 - MGP_BALBcJ_P0067178 Mmachc protein_coding protein_coding MGP_BALBcJ_T0067179.1 MGP_BALBcJ_G0028614.1 mouse_genomes_project 4 113733281 113738479 - Mmachc protein_coding processed_transcript MGP_BALBcJ_T0007979.1 MGP_BALBcJ_G0006508.1 mouse_genomes_project 4 136771368 136774860 - 2700016F22Rik lincRNA lincRNA MGP_BALBcJ_T0099817.1 MGP_BALBcJ_G0037853.1 mouse_genomes_project 4 24282409 24282506 + Gm25173 snRNA snRNA MGP_BALBcJ_T0014525.1 MGP_BALBcJ_G0012622.1 mouse_genomes_project 4 48875586 48875886 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010626.1 MGP_BALBcJ_G0008751.1 mouse_genomes_project 4 135698767 135698877 - Gm27646 miRNA miRNA MGP_BALBcJ_T0065384.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40365904 40385335 + MGP_BALBcJ_P0065384 Npr2 protein_coding protein_coding MGP_BALBcJ_T0065385.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40366154 40385335 + MGP_BALBcJ_P0065385 Npr2 protein_coding protein_coding MGP_BALBcJ_T0065386.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40375193 40385335 + Npr2 protein_coding processed_transcript MGP_BALBcJ_T0065387.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40375332 40377177 + Npr2 protein_coding processed_transcript MGP_BALBcJ_T0065388.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40375339 40378463 + MGP_BALBcJ_P0065388 Npr2 protein_coding protein_coding MGP_BALBcJ_T0065389.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40375361 40385335 + MGP_BALBcJ_P0065389 Npr2 protein_coding protein_coding MGP_BALBcJ_T0065390.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40378219 40382262 + Npr2 protein_coding processed_transcript MGP_BALBcJ_T0065391.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40380643 40384400 + Npr2 protein_coding processed_transcript MGP_BALBcJ_T0065392.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40381280 40382489 + Npr2 protein_coding processed_transcript MGP_BALBcJ_T0065393.1 MGP_BALBcJ_G0028193.1 mouse_genomes_project 4 40382088 40384321 + Npr2 protein_coding processed_transcript MGP_BALBcJ_T0011534.1 MGP_BALBcJ_G0009659.1 mouse_genomes_project 4 8396980 8397296 + Gm22477 misc_RNA misc_RNA MGP_BALBcJ_T0064656.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7781497 7836228 - MGP_BALBcJ_P0064656 Esrp1 protein_coding protein_coding MGP_BALBcJ_T0064657.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7781497 7836332 - MGP_BALBcJ_P0064657 Esrp1 protein_coding protein_coding MGP_BALBcJ_T0064658.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7781602 7836332 - MGP_BALBcJ_P0064658 Esrp1 protein_coding protein_coding MGP_BALBcJ_T0064659.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7782569 7836228 - MGP_BALBcJ_P0064659 Esrp1 protein_coding protein_coding MGP_BALBcJ_T0064660.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7782569 7816612 - MGP_BALBcJ_P0064660 Esrp1 protein_coding protein_coding MGP_BALBcJ_T0064661.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7790173 7793677 - Esrp1 protein_coding processed_transcript MGP_BALBcJ_T0064662.1 MGP_BALBcJ_G0028021.1 mouse_genomes_project 4 7807020 7835943 - MGP_BALBcJ_P0064662 Esrp1 protein_coding protein_coding MGP_BALBcJ_T0069126.1 MGP_BALBcJ_G0029077.1 mouse_genomes_project 4 142294182 142304213 - MGP_BALBcJ_P0069126 Gm13124 protein_coding protein_coding MGP_BALBcJ_T0064940.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31308857 31354065 + MGP_BALBcJ_P0064940 Rars2 protein_coding protein_coding MGP_BALBcJ_T0064941.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31308861 31312822 + Rars2 protein_coding processed_transcript MGP_BALBcJ_T0064942.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31308869 31319335 + Rars2 protein_coding processed_transcript MGP_BALBcJ_T0064943.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31308874 31354061 + Rars2 protein_coding processed_transcript MGP_BALBcJ_T0064944.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31308876 31324462 + MGP_BALBcJ_P0064944 Rars2 protein_coding protein_coding MGP_BALBcJ_T0064945.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31308878 31317327 + Rars2 protein_coding processed_transcript MGP_BALBcJ_T0064946.1 MGP_BALBcJ_G0028097.1 mouse_genomes_project 4 31341599 31350075 + Rars2 protein_coding processed_transcript MGP_BALBcJ_T0066992.1 MGP_BALBcJ_G0028567.1 mouse_genomes_project 4 109681192 109747515 - MGP_BALBcJ_P0066992 Skint10 protein_coding protein_coding MGP_BALBcJ_T0066993.1 MGP_BALBcJ_G0028567.1 mouse_genomes_project 4 109742047 109747556 - MGP_BALBcJ_P0066993 Skint10 protein_coding protein_coding MGP_BALBcJ_T0066994.1 MGP_BALBcJ_G0028567.1 mouse_genomes_project 4 109743471 109747517 - Skint10 protein_coding processed_transcript MGP_BALBcJ_T0014581.1 MGP_BALBcJ_G0012678.1 mouse_genomes_project 4 70964314 70965110 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069426.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 148920490 149876428 - MGP_BALBcJ_P0069426 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069444.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149064970 149876635 - MGP_BALBcJ_P0069444 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069445.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149064971 149876505 - MGP_BALBcJ_P0069445 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069446.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149064971 149085239 - MGP_BALBcJ_P0069446 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069447.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149065259 149114011 - MGP_BALBcJ_P0069447 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069448.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149065259 149135565 - MGP_BALBcJ_P0069448 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069449.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149091480 149145626 - Camta1 protein_coding processed_transcript MGP_BALBcJ_T0069450.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149091565 149113738 - MGP_BALBcJ_P0069450 Camta1 protein_coding protein_coding MGP_BALBcJ_T0069452.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149479839 149876409 - Camta1 protein_coding processed_transcript MGP_BALBcJ_T0069453.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149803948 149876463 - Camta1 protein_coding processed_transcript MGP_BALBcJ_T0069454.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149805591 149876428 - MGP_BALBcJ_P0069454 Camta1 protein_coding unknown_likely_coding MGP_BALBcJ_T0069455.1 MGP_BALBcJ_G0029140.1 mouse_genomes_project 4 149805604 149876497 - Camta1 protein_coding processed_transcript MGP_BALBcJ_T0065602.1 MGP_BALBcJ_G0028240.1 mouse_genomes_project 4 43311951 43342457 - MGP_BALBcJ_P0065602 Coro2a protein_coding protein_coding MGP_BALBcJ_T0065603.1 MGP_BALBcJ_G0028240.1 mouse_genomes_project 4 43311957 43342475 - MGP_BALBcJ_P0065603 Coro2a protein_coding protein_coding MGP_BALBcJ_T0065604.1 MGP_BALBcJ_G0028240.1 mouse_genomes_project 4 43311957 43369572 - MGP_BALBcJ_P0065604 Coro2a protein_coding protein_coding MGP_BALBcJ_T0065605.1 MGP_BALBcJ_G0028240.1 mouse_genomes_project 4 43315529 43318552 - Coro2a protein_coding processed_transcript MGP_BALBcJ_T0065606.1 MGP_BALBcJ_G0028240.1 mouse_genomes_project 4 43316295 43318688 - Coro2a protein_coding retained_intron MGP_BALBcJ_T0065607.1 MGP_BALBcJ_G0028240.1 mouse_genomes_project 4 43318886 43368892 - Coro2a protein_coding retained_intron MGP_BALBcJ_T0007878.1 MGP_BALBcJ_G0006440.1 mouse_genomes_project 4 98232811 98233794 + Gm12801 lincRNA lincRNA MGP_BALBcJ_T0067264.1 MGP_BALBcJ_G0028630.1 mouse_genomes_project 4 114249147 114288504 - MGP_BALBcJ_P0067264 Gm1661 protein_coding protein_coding MGP_BALBcJ_T0067265.1 MGP_BALBcJ_G0028630.1 mouse_genomes_project 4 114250999 114288504 - MGP_BALBcJ_P0067265 Gm1661 protein_coding protein_coding MGP_BALBcJ_T0067266.1 MGP_BALBcJ_G0028630.1 mouse_genomes_project 4 114279240 114288712 - Gm1661 protein_coding processed_transcript MGP_BALBcJ_T0014510.1 MGP_BALBcJ_G0012607.1 mouse_genomes_project 4 42538807 42539135 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010579.1 MGP_BALBcJ_G0008704.1 mouse_genomes_project 4 55246438 55246525 - Mir3095 miRNA miRNA MGP_BALBcJ_T0014694.1 MGP_BALBcJ_G0012791.1 mouse_genomes_project 4 108791329 108792379 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001403.1 MGP_BALBcJ_G0001325.1 mouse_genomes_project 4 9103911 9179958 + TEC TEC MGP_BALBcJ_T0065782.1 MGP_BALBcJ_G0028293.1 mouse_genomes_project 4 53663186 53744516 - MGP_BALBcJ_P0065782 Tmem245 protein_coding protein_coding MGP_BALBcJ_T0065783.1 MGP_BALBcJ_G0028293.1 mouse_genomes_project 4 53675615 53734850 - Tmem245 protein_coding processed_transcript MGP_BALBcJ_T0065784.1 MGP_BALBcJ_G0028293.1 mouse_genomes_project 4 53675615 53720234 - MGP_BALBcJ_P0065784 Tmem245 protein_coding protein_coding MGP_BALBcJ_T0065785.1 MGP_BALBcJ_G0028293.1 mouse_genomes_project 4 53675986 53744490 - MGP_BALBcJ_P0065785 Tmem245 protein_coding protein_coding MGP_BALBcJ_T0065786.1 MGP_BALBcJ_G0028293.1 mouse_genomes_project 4 53681372 53744503 - Tmem245 protein_coding processed_transcript MGP_BALBcJ_T0099859.1 MGP_BALBcJ_G0037895.1 mouse_genomes_project 4 105555712 105555819 - Gm22345 snRNA snRNA MGP_BALBcJ_T0065893.1 MGP_BALBcJ_G0028321.1 mouse_genomes_project 4 56748929 56758870 - MGP_BALBcJ_P0065893 Slc46a2 protein_coding protein_coding MGP_BALBcJ_T0007765.1 MGP_BALBcJ_G0006345.1 mouse_genomes_project 4 2047142 2053128 - Gm11782 lincRNA lincRNA MGP_BALBcJ_T0004536.1 MGP_BALBcJ_G0003940.1 mouse_genomes_project 4 132574092 132576263 + Gm12984 antisense antisense MGP_BALBcJ_T0068162.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128925929 128997288 - MGP_BALBcJ_P0068162 Ptpru protein_coding unknown_likely_coding MGP_BALBcJ_T0068163.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128925933 128997420 - MGP_BALBcJ_P0068163 Ptpru protein_coding protein_coding MGP_BALBcJ_T0068164.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128925934 128926398 - Ptpru protein_coding processed_transcript MGP_BALBcJ_T0068165.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128926974 128997363 - MGP_BALBcJ_P0068165 Ptpru protein_coding protein_coding MGP_BALBcJ_T0068166.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128929612 128997384 - Ptpru protein_coding processed_transcript MGP_BALBcJ_T0068167.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128941175 128980649 - MGP_BALBcJ_P0068167 Ptpru protein_coding protein_coding MGP_BALBcJ_T0068168.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128946479 128961353 - Ptpru protein_coding processed_transcript MGP_BALBcJ_T0068169.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128951546 128956318 - Ptpru protein_coding retained_intron MGP_BALBcJ_T0068170.1 MGP_BALBcJ_G0028839.1 mouse_genomes_project 4 128958096 128961977 - Ptpru protein_coding retained_intron MGP_BALBcJ_T0068373.1 MGP_BALBcJ_G0028885.1 mouse_genomes_project 4 130882998 130895645 - MGP_BALBcJ_P0068373 Pigv protein_coding protein_coding MGP_BALBcJ_T0068374.1 MGP_BALBcJ_G0028885.1 mouse_genomes_project 4 130884838 130895645 - MGP_BALBcJ_P0068374 Pigv protein_coding protein_coding MGP_BALBcJ_T0068375.1 MGP_BALBcJ_G0028885.1 mouse_genomes_project 4 130891744 130895645 - Pigv protein_coding processed_transcript MGP_BALBcJ_T0066220.1 MGP_BALBcJ_G0028397.1 mouse_genomes_project 4 83861889 83904039 + MGP_BALBcJ_P0066220 Acer2 protein_coding protein_coding MGP_BALBcJ_T0066221.1 MGP_BALBcJ_G0028397.1 mouse_genomes_project 4 83861907 83915060 + Acer2 protein_coding processed_transcript MGP_BALBcJ_T0066222.1 MGP_BALBcJ_G0028397.1 mouse_genomes_project 4 83861907 83904039 + MGP_BALBcJ_P0066222 Acer2 protein_coding protein_coding MGP_BALBcJ_T0066223.1 MGP_BALBcJ_G0028397.1 mouse_genomes_project 4 83913097 83917390 + Acer2 protein_coding processed_transcript MGP_BALBcJ_T0069593.1 MGP_BALBcJ_G0029168.1 mouse_genomes_project 4 152044830 152078968 + MGP_BALBcJ_P0069593 Cep104 protein_coding protein_coding MGP_BALBcJ_T0069594.1 MGP_BALBcJ_G0029168.1 mouse_genomes_project 4 152059005 152078968 + MGP_BALBcJ_P0069594 Cep104 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069595.1 MGP_BALBcJ_G0029168.1 mouse_genomes_project 4 152059744 152060615 + Cep104 protein_coding retained_intron MGP_BALBcJ_T0007981.1 MGP_BALBcJ_G0006510.1 mouse_genomes_project 4 137339907 137349430 + Gm13028 lincRNA lincRNA MGP_BALBcJ_T0010617.1 MGP_BALBcJ_G0008742.1 mouse_genomes_project 4 131707450 131707541 + Gm23634 miRNA miRNA MGP_BALBcJ_T0007770.1 MGP_BALBcJ_G0006349.1 mouse_genomes_project 4 6919180 6939980 - lincRNA lincRNA MGP_BALBcJ_T0007771.1 MGP_BALBcJ_G0006349.1 mouse_genomes_project 4 6938192 7236215 - lincRNA lincRNA MGP_BALBcJ_T0007772.1 MGP_BALBcJ_G0006349.1 mouse_genomes_project 4 7183210 7236199 - lincRNA lincRNA MGP_BALBcJ_T0007773.1 MGP_BALBcJ_G0006349.1 mouse_genomes_project 4 7183486 7236202 - lincRNA lincRNA MGP_BALBcJ_T0065421.1 MGP_BALBcJ_G0028205.1 mouse_genomes_project 4 40612068 40682938 + Reck protein_coding processed_transcript MGP_BALBcJ_T0065422.1 MGP_BALBcJ_G0028205.1 mouse_genomes_project 4 40612068 40682999 + MGP_BALBcJ_P0065422 Reck protein_coding protein_coding MGP_BALBcJ_T0065423.1 MGP_BALBcJ_G0028205.1 mouse_genomes_project 4 40678590 40680575 + Reck protein_coding processed_transcript MGP_BALBcJ_T0007799.1 MGP_BALBcJ_G0006373.1 mouse_genomes_project 4 33990030 34077270 + Gm12374 lincRNA lincRNA MGP_BALBcJ_T0014437.1 MGP_BALBcJ_G0012534.1 mouse_genomes_project 4 20032891 20033806 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069787.1 MGP_BALBcJ_G0029201.1 mouse_genomes_project 4 153743692 153746422 - MGP_BALBcJ_P0069787 Mmp23 protein_coding protein_coding MGP_BALBcJ_T0069788.1 MGP_BALBcJ_G0029201.1 mouse_genomes_project 4 153743694 153745063 - Mmp23 protein_coding retained_intron MGP_BALBcJ_T0069789.1 MGP_BALBcJ_G0029201.1 mouse_genomes_project 4 153745290 153746245 - Mmp23 protein_coding retained_intron MGP_BALBcJ_T0069790.1 MGP_BALBcJ_G0029201.1 mouse_genomes_project 4 153745307 153745930 - Mmp23 protein_coding retained_intron MGP_BALBcJ_T0004540.1 MGP_BALBcJ_G0003944.1 mouse_genomes_project 4 135070322 135080344 - Rap1gapos antisense antisense MGP_BALBcJ_T0007931.1 MGP_BALBcJ_G0006476.1 mouse_genomes_project 4 124774495 124799445 + A630031M04Rik lincRNA lincRNA MGP_BALBcJ_T0010630.1 MGP_BALBcJ_G0008755.1 mouse_genomes_project 4 138158663 138158727 + Gm25951 miRNA miRNA MGP_BALBcJ_T0065686.1 MGP_BALBcJ_G0028264.1 mouse_genomes_project 4 46398587 46411901 - MGP_BALBcJ_P0065686 Tmem246 protein_coding protein_coding MGP_BALBcJ_T0065687.1 MGP_BALBcJ_G0028264.1 mouse_genomes_project 4 46400847 46411495 - MGP_BALBcJ_P0065687 Tmem246 protein_coding protein_coding MGP_BALBcJ_T0065688.1 MGP_BALBcJ_G0028264.1 mouse_genomes_project 4 46401133 46407972 - MGP_BALBcJ_P0065688 Tmem246 protein_coding protein_coding MGP_BALBcJ_T0065896.1 MGP_BALBcJ_G0028324.1 mouse_genomes_project 4 58824810 59010138 - MGP_BALBcJ_P0065896 protein_coding protein_coding MGP_BALBcJ_T0069816.1 MGP_BALBcJ_G0029207.1 mouse_genomes_project 4 153859278 153865861 - MGP_BALBcJ_P0069816 Vwa1 protein_coding protein_coding MGP_BALBcJ_T0066200.1 MGP_BALBcJ_G0028393.1 mouse_genomes_project 4 83517269 83550482 - MGP_BALBcJ_P0066200 Haus6 protein_coding protein_coding MGP_BALBcJ_T0066201.1 MGP_BALBcJ_G0028393.1 mouse_genomes_project 4 83523450 83550482 - Haus6 protein_coding processed_transcript MGP_BALBcJ_T0066202.1 MGP_BALBcJ_G0028393.1 mouse_genomes_project 4 83541325 83550446 - Haus6 protein_coding processed_transcript MGP_BALBcJ_T0066203.1 MGP_BALBcJ_G0028393.1 mouse_genomes_project 4 83544085 83550476 - MGP_BALBcJ_P0066203 Haus6 protein_coding protein_coding MGP_BALBcJ_T0014654.1 MGP_BALBcJ_G0012751.1 mouse_genomes_project 4 96634442 96635148 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004558.1 MGP_BALBcJ_G0003958.1 mouse_genomes_project 4 139447756 139451562 + Fhad1os1 antisense antisense MGP_BALBcJ_T0004498.1 MGP_BALBcJ_G0003909.1 mouse_genomes_project 4 114489807 114498850 + Gm12828 antisense antisense MGP_BALBcJ_T0068376.1 MGP_BALBcJ_G0028886.1 mouse_genomes_project 4 130901989 130976234 - MGP_BALBcJ_P0068376 Arid1a protein_coding protein_coding MGP_BALBcJ_T0068377.1 MGP_BALBcJ_G0028886.1 mouse_genomes_project 4 130901989 130976234 - MGP_BALBcJ_P0068377 Arid1a protein_coding protein_coding MGP_BALBcJ_T0068378.1 MGP_BALBcJ_G0028886.1 mouse_genomes_project 4 130902922 130979736 - MGP_BALBcJ_P0068378 Arid1a protein_coding protein_coding MGP_BALBcJ_T0068379.1 MGP_BALBcJ_G0028886.1 mouse_genomes_project 4 130912620 130945669 - Arid1a protein_coding retained_intron MGP_BALBcJ_T0068380.1 MGP_BALBcJ_G0028886.1 mouse_genomes_project 4 130941983 130943395 - Arid1a protein_coding retained_intron MGP_BALBcJ_T0068381.1 MGP_BALBcJ_G0028886.1 mouse_genomes_project 4 130943397 130946491 - MGP_BALBcJ_P0068381 Arid1a protein_coding protein_coding MGP_BALBcJ_T0065034.1 MGP_BALBcJ_G0028119.1 mouse_genomes_project 4 37690689 37705951 + MGP_BALBcJ_P0065034 Spink4 protein_coding protein_coding MGP_BALBcJ_T0065035.1 MGP_BALBcJ_G0028119.1 mouse_genomes_project 4 37690691 37695682 + Spink4 protein_coding processed_transcript MGP_BALBcJ_T0065326.1 MGP_BALBcJ_G0028184.1 mouse_genomes_project 4 40222263 40223569 + Ccdc107 protein_coding processed_transcript MGP_BALBcJ_T0065327.1 MGP_BALBcJ_G0028184.1 mouse_genomes_project 4 40222725 40225285 + MGP_BALBcJ_P0065327 Ccdc107 protein_coding protein_coding MGP_BALBcJ_T0065328.1 MGP_BALBcJ_G0028184.1 mouse_genomes_project 4 40222740 40223174 + Ccdc107 protein_coding processed_transcript MGP_BALBcJ_T0065329.1 MGP_BALBcJ_G0028184.1 mouse_genomes_project 4 40222752 40225285 + MGP_BALBcJ_P0065329 Ccdc107 protein_coding protein_coding MGP_BALBcJ_T0065330.1 MGP_BALBcJ_G0028184.1 mouse_genomes_project 4 40222780 40225228 + Ccdc107 protein_coding processed_transcript MGP_BALBcJ_T0065331.1 MGP_BALBcJ_G0028184.1 mouse_genomes_project 4 40222780 40225235 + Ccdc107 protein_coding processed_transcript MGP_BALBcJ_T0007766.1 MGP_BALBcJ_G0006346.1 mouse_genomes_project 4 2136136 2146199 + 4930423M02Rik lincRNA lincRNA MGP_BALBcJ_T0007767.1 MGP_BALBcJ_G0006346.1 mouse_genomes_project 4 2136144 2145672 + 4930423M02Rik lincRNA lincRNA MGP_BALBcJ_T0067413.1 MGP_BALBcJ_G0028667.1 mouse_genomes_project 4 115990884 115993227 - MGP_BALBcJ_P0067413 protein_coding protein_coding MGP_BALBcJ_T0099898.1 MGP_BALBcJ_G0037934.1 mouse_genomes_project 4 154108736 154108837 - Gm25982 snRNA snRNA MGP_BALBcJ_T0014427.1 MGP_BALBcJ_G0012524.1 mouse_genomes_project 4 16930962 16932266 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014814.1 MGP_BALBcJ_G0012911.1 mouse_genomes_project 4 150712749 150713005 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065787.1 MGP_BALBcJ_G0028294.1 mouse_genomes_project 4 53754404 53789072 - MGP_BALBcJ_P0065787 Frrs1l protein_coding protein_coding MGP_BALBcJ_T0065788.1 MGP_BALBcJ_G0028294.1 mouse_genomes_project 4 53757297 53788817 - MGP_BALBcJ_P0065788 Frrs1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004541.1 MGP_BALBcJ_G0003945.1 mouse_genomes_project 4 135260278 135261344 - Gm13012 antisense antisense MGP_BALBcJ_T0004542.1 MGP_BALBcJ_G0003945.1 mouse_genomes_project 4 135260278 135261858 - Gm13012 antisense antisense MGP_BALBcJ_T0004543.1 MGP_BALBcJ_G0003945.1 mouse_genomes_project 4 135260278 135261869 - Gm13012 antisense antisense MGP_BALBcJ_T0007869.1 MGP_BALBcJ_G0006432.1 mouse_genomes_project 4 91084946 91417899 - lincRNA lincRNA MGP_BALBcJ_T0014482.1 MGP_BALBcJ_G0012579.1 mouse_genomes_project 4 31540364 31541032 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068746.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135115206 135171975 - MGP_BALBcJ_P0068746 Alpl protein_coding protein_coding MGP_BALBcJ_T0068747.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135119917 135120645 - Alpl protein_coding processed_transcript MGP_BALBcJ_T0068748.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135126030 135140326 - MGP_BALBcJ_P0068748 Alpl protein_coding protein_coding MGP_BALBcJ_T0068749.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135127631 135157823 - MGP_BALBcJ_P0068749 Alpl protein_coding protein_coding MGP_BALBcJ_T0068750.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135128842 135160999 - MGP_BALBcJ_P0068750 Alpl protein_coding protein_coding MGP_BALBcJ_T0068751.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135129386 135171821 - Alpl protein_coding processed_transcript MGP_BALBcJ_T0068752.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135132423 135144146 - Alpl protein_coding processed_transcript MGP_BALBcJ_T0068753.1 MGP_BALBcJ_G0028970.1 mouse_genomes_project 4 135132423 135144351 - Alpl protein_coding processed_transcript MGP_BALBcJ_T0065898.1 MGP_BALBcJ_G0028326.1 mouse_genomes_project 4 59007485 59010249 - MGP_BALBcJ_P0065898 protein_coding protein_coding MGP_BALBcJ_T0102508.1 MGP_BALBcJ_G0040324.1 mouse_genomes_project 4 46121203 46129193 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066284.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88306625 88460020 - MGP_BALBcJ_P0066284 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066285.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88306625 88428760 - MGP_BALBcJ_P0066285 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066286.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88306625 88428780 - MGP_BALBcJ_P0066286 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066287.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88306625 88428795 - MGP_BALBcJ_P0066287 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066288.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88308942 88310445 - Elavl2 protein_coding retained_intron MGP_BALBcJ_T0066289.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88309102 88367745 - MGP_BALBcJ_P0066289 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066290.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88309102 88369504 - MGP_BALBcJ_P0066290 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066291.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88314528 88433030 - Elavl2 protein_coding retained_intron MGP_BALBcJ_T0066292.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88319958 88413383 - MGP_BALBcJ_P0066292 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066293.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88364775 88429756 - MGP_BALBcJ_P0066293 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066294.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88364869 88428682 - MGP_BALBcJ_P0066294 Elavl2 protein_coding protein_coding MGP_BALBcJ_T0066295.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88437150 88460012 - Elavl2 protein_coding processed_transcript MGP_BALBcJ_T0066296.1 MGP_BALBcJ_G0028426.1 mouse_genomes_project 4 88459930 88460925 - Elavl2 protein_coding processed_transcript MGP_BALBcJ_T0069014.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139044321 139068335 - MGP_BALBcJ_P0069014 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069015.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139044321 139066641 - MGP_BALBcJ_P0069015 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069016.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139044321 139074481 - MGP_BALBcJ_P0069016 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069017.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139057818 139068246 - MGP_BALBcJ_P0069017 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069018.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139057840 139074525 - MGP_BALBcJ_P0069018 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069019.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139057840 139074466 - MGP_BALBcJ_P0069019 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069020.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139057863 139066934 - MGP_BALBcJ_P0069020 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069021.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139058505 139068444 - MGP_BALBcJ_P0069021 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069022.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139058568 139064877 - Fblim1 protein_coding processed_transcript MGP_BALBcJ_T0069023.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139058584 139068299 - MGP_BALBcJ_P0069023 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069024.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139058585 139066641 - MGP_BALBcJ_P0069024 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069025.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139058595 139066623 - MGP_BALBcJ_P0069025 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069026.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139063607 139074454 - MGP_BALBcJ_P0069026 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069027.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139063658 139074465 - MGP_BALBcJ_P0069027 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0069028.1 MGP_BALBcJ_G0029034.1 mouse_genomes_project 4 139063725 139074456 - MGP_BALBcJ_P0069028 Fblim1 protein_coding protein_coding MGP_BALBcJ_T0068103.1 MGP_BALBcJ_G0028825.1 mouse_genomes_project 4 127404593 127430155 + MGP_BALBcJ_P0068103 Pef1 protein_coding protein_coding MGP_BALBcJ_T0068104.1 MGP_BALBcJ_G0028825.1 mouse_genomes_project 4 127409591 127430154 + MGP_BALBcJ_P0068104 Pef1 protein_coding protein_coding MGP_BALBcJ_T0004505.1 MGP_BALBcJ_G0003916.1 mouse_genomes_project 4 116323670 116328079 - Gm12927 antisense antisense MGP_BALBcJ_T0099857.1 MGP_BALBcJ_G0037893.1 mouse_genomes_project 4 105515763 105515866 + Gm23138 snRNA snRNA MGP_BALBcJ_T0010612.1 MGP_BALBcJ_G0008737.1 mouse_genomes_project 4 129577440 129577536 + Gm25707 miRNA miRNA MGP_BALBcJ_T0067403.1 MGP_BALBcJ_G0028657.1 mouse_genomes_project 4 115721605 115722553 + MGP_BALBcJ_P0067403 Olfr62 protein_coding protein_coding MGP_BALBcJ_T0014408.1 MGP_BALBcJ_G0012505.1 mouse_genomes_project 4 12459845 12460201 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068278.1 MGP_BALBcJ_G0028859.1 mouse_genomes_project 4 129908129 129916324 - MGP_BALBcJ_P0068278 Xkr8 protein_coding protein_coding MGP_BALBcJ_T0068279.1 MGP_BALBcJ_G0028859.1 mouse_genomes_project 4 129912292 129916306 - Xkr8 protein_coding processed_transcript MGP_BALBcJ_T0068280.1 MGP_BALBcJ_G0028859.1 mouse_genomes_project 4 129914681 129916261 - Xkr8 protein_coding processed_transcript MGP_BALBcJ_T0007800.1 MGP_BALBcJ_G0006374.1 mouse_genomes_project 4 35340060 35630954 - lincRNA lincRNA MGP_BALBcJ_T0014617.1 MGP_BALBcJ_G0012714.1 mouse_genomes_project 4 83803215 83803999 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007996.1 MGP_BALBcJ_G0006524.1 mouse_genomes_project 4 146653969 146656880 + Gm13203 lincRNA lincRNA MGP_BALBcJ_T0014750.1 MGP_BALBcJ_G0012847.1 mouse_genomes_project 4 124362986 124363196 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010639.1 MGP_BALBcJ_G0008764.1 mouse_genomes_project 4 154139811 154139894 - Mir429 miRNA miRNA MGP_BALBcJ_T0065705.1 MGP_BALBcJ_G0028269.1 mouse_genomes_project 4 49243385 49293426 + MGP_BALBcJ_P0065705 Smc2 protein_coding protein_coding MGP_BALBcJ_T0065706.1 MGP_BALBcJ_G0028269.1 mouse_genomes_project 4 49243385 49293426 + MGP_BALBcJ_P0065706 Smc2 protein_coding protein_coding MGP_BALBcJ_T0065707.1 MGP_BALBcJ_G0028269.1 mouse_genomes_project 4 49243394 49252325 + Smc2 protein_coding processed_transcript MGP_BALBcJ_T0065708.1 MGP_BALBcJ_G0028269.1 mouse_genomes_project 4 49243408 49255875 + Smc2 protein_coding processed_transcript MGP_BALBcJ_T0065709.1 MGP_BALBcJ_G0028269.1 mouse_genomes_project 4 49243411 49263121 + MGP_BALBcJ_P0065709 Smc2 protein_coding protein_coding MGP_BALBcJ_T0066021.1 MGP_BALBcJ_G0028361.1 mouse_genomes_project 4 65733569 65945598 - MGP_BALBcJ_P0066021 Brinp1 protein_coding protein_coding MGP_BALBcJ_T0066022.1 MGP_BALBcJ_G0028361.1 mouse_genomes_project 4 65768349 65820601 - Brinp1 protein_coding processed_transcript MGP_BALBcJ_T0066023.1 MGP_BALBcJ_G0028361.1 mouse_genomes_project 4 65802189 65804843 - Brinp1 protein_coding processed_transcript MGP_BALBcJ_T0007893.1 MGP_BALBcJ_G0006451.1 mouse_genomes_project 4 103838450 103845150 - Gm12746 lincRNA lincRNA MGP_BALBcJ_T0065905.1 MGP_BALBcJ_G0028329.1 mouse_genomes_project 4 59234482 59265661 - Fkbp15 protein_coding processed_transcript MGP_BALBcJ_T0065906.1 MGP_BALBcJ_G0028329.1 mouse_genomes_project 4 59234482 59295332 - MGP_BALBcJ_P0065906 Fkbp15 protein_coding protein_coding MGP_BALBcJ_T0065907.1 MGP_BALBcJ_G0028329.1 mouse_genomes_project 4 59244726 59295410 - MGP_BALBcJ_P0065907 Fkbp15 protein_coding protein_coding MGP_BALBcJ_T0065908.1 MGP_BALBcJ_G0028329.1 mouse_genomes_project 4 59252080 59295356 - MGP_BALBcJ_P0065908 Fkbp15 protein_coding protein_coding MGP_BALBcJ_T0065909.1 MGP_BALBcJ_G0028329.1 mouse_genomes_project 4 59254096 59295396 - MGP_BALBcJ_P0065909 Fkbp15 protein_coding protein_coding MGP_BALBcJ_T0065910.1 MGP_BALBcJ_G0028329.1 mouse_genomes_project 4 59277516 59295331 - Fkbp15 protein_coding processed_transcript MGP_BALBcJ_T0102545.1 MGP_BALBcJ_G0040361.1 mouse_genomes_project 4 119844690 119849140 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066080.1 MGP_BALBcJ_G0028373.1 mouse_genomes_project 4 76983651 76984152 - MGP_BALBcJ_P0066080 mt-Nd6 protein_coding protein_coding MGP_BALBcJ_T0065196.1 MGP_BALBcJ_G0028167.1 mouse_genomes_project 4 39460191 39460857 - MGP_BALBcJ_P0065196 protein_coding protein_coding MGP_BALBcJ_T0065671.1 MGP_BALBcJ_G0028257.1 mouse_genomes_project 4 45863628 46009456 + protein_coding retained_intron MGP_BALBcJ_T0065672.1 MGP_BALBcJ_G0028257.1 mouse_genomes_project 4 45863811 46101189 + protein_coding retained_intron MGP_BALBcJ_T0065673.1 MGP_BALBcJ_G0028257.1 mouse_genomes_project 4 46007288 46123221 + MGP_BALBcJ_P0065673 protein_coding unknown_likely_coding MGP_BALBcJ_T0065883.1 MGP_BALBcJ_G0028318.1 mouse_genomes_project 4 56461298 56603855 + MGP_BALBcJ_P0065883 E130308A19Rik protein_coding protein_coding MGP_BALBcJ_T0065884.1 MGP_BALBcJ_G0028318.1 mouse_genomes_project 4 56461330 56562877 + MGP_BALBcJ_P0065884 E130308A19Rik protein_coding protein_coding MGP_BALBcJ_T0065885.1 MGP_BALBcJ_G0028318.1 mouse_genomes_project 4 56525537 56561719 + E130308A19Rik protein_coding processed_transcript MGP_BALBcJ_T0014394.1 MGP_BALBcJ_G0012491.1 mouse_genomes_project 4 8624097 8624372 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068327.1 MGP_BALBcJ_G0028871.1 mouse_genomes_project 4 130431491 130443541 + MGP_BALBcJ_P0068327 Map3k6 protein_coding protein_coding MGP_BALBcJ_T0068328.1 MGP_BALBcJ_G0028871.1 mouse_genomes_project 4 130437840 130438696 + Map3k6 protein_coding processed_transcript MGP_BALBcJ_T0068329.1 MGP_BALBcJ_G0028871.1 mouse_genomes_project 4 130437916 130438724 + Map3k6 protein_coding processed_transcript MGP_BALBcJ_T0068330.1 MGP_BALBcJ_G0028871.1 mouse_genomes_project 4 130441459 130443540 + Map3k6 protein_coding processed_transcript MGP_BALBcJ_T0069128.1 MGP_BALBcJ_G0029079.1 mouse_genomes_project 4 142417259 142442901 - MGP_BALBcJ_P0069128 Gm436 protein_coding protein_coding MGP_BALBcJ_T0014691.1 MGP_BALBcJ_G0012788.1 mouse_genomes_project 4 108281949 108282948 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007930.1 MGP_BALBcJ_G0006475.1 mouse_genomes_project 4 124760688 124761952 + 1700080G11Rik lincRNA lincRNA MGP_BALBcJ_T0004446.1 MGP_BALBcJ_G0003874.1 mouse_genomes_project 4 60333893 60346587 + Aknaos antisense antisense MGP_BALBcJ_T0098948.1 MGP_BALBcJ_G0036995.1 mouse_genomes_project 4 132701542 132702258 - Gm15979 sense_intronic sense_intronic MGP_BALBcJ_T0067573.1 MGP_BALBcJ_G0028708.1 mouse_genomes_project 4 119809393 119826814 + MGP_BALBcJ_P0067573 9530002B09Rik protein_coding protein_coding MGP_BALBcJ_T0014639.1 MGP_BALBcJ_G0012736.1 mouse_genomes_project 4 91488968 91489545 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014800.1 MGP_BALBcJ_G0012897.1 mouse_genomes_project 4 143243720 143244035 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068892.1 MGP_BALBcJ_G0029004.1 mouse_genomes_project 4 137022138 137050187 + MGP_BALBcJ_P0068892 Aldh4a1 protein_coding protein_coding MGP_BALBcJ_T0068893.1 MGP_BALBcJ_G0029004.1 mouse_genomes_project 4 137022166 137050184 + Aldh4a1 protein_coding processed_transcript MGP_BALBcJ_T0068894.1 MGP_BALBcJ_G0029004.1 mouse_genomes_project 4 137022381 137034907 + Aldh4a1 protein_coding processed_transcript MGP_BALBcJ_T0010573.1 MGP_BALBcJ_G0008698.1 mouse_genomes_project 4 41351509 41351587 - Mir5120 miRNA miRNA MGP_BALBcJ_T0069800.1 MGP_BALBcJ_G0029203.1 mouse_genomes_project 4 153780820 153782960 + MGP_BALBcJ_P0069800 Fndc10 protein_coding protein_coding MGP_BALBcJ_T0014551.1 MGP_BALBcJ_G0012648.1 mouse_genomes_project 4 54270058 54272047 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011546.1 MGP_BALBcJ_G0009671.1 mouse_genomes_project 4 50539819 50540118 - Gm25445 misc_RNA misc_RNA MGP_BALBcJ_T0007839.1 MGP_BALBcJ_G0006406.1 mouse_genomes_project 4 59652418 59656440 - Gm11211 lincRNA lincRNA MGP_BALBcJ_T0014688.1 MGP_BALBcJ_G0012785.1 mouse_genomes_project 4 106643257 106644401 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067059.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857747 112897790 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067060.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857747 112897790 + MGP_BALBcJ_P0067060 Mknk1 protein_coding protein_coding MGP_BALBcJ_T0067061.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857770 112883138 + MGP_BALBcJ_P0067061 Mknk1 protein_coding protein_coding MGP_BALBcJ_T0067062.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857772 112892410 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067063.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857782 112867131 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067064.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857782 112897790 + MGP_BALBcJ_P0067064 Mknk1 protein_coding protein_coding MGP_BALBcJ_T0067065.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857784 112885105 + MGP_BALBcJ_P0067065 Mknk1 protein_coding protein_coding MGP_BALBcJ_T0067066.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857789 112883175 + MGP_BALBcJ_P0067066 Mknk1 protein_coding protein_coding MGP_BALBcJ_T0067067.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857793 112875657 + MGP_BALBcJ_P0067067 Mknk1 protein_coding protein_coding MGP_BALBcJ_T0067068.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112857809 112881834 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067069.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112875591 112897204 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067070.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112875665 112895150 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067071.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112884839 112885900 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0067072.1 MGP_BALBcJ_G0028592.1 mouse_genomes_project 4 112893310 112895592 + Mknk1 protein_coding processed_transcript MGP_BALBcJ_T0014627.1 MGP_BALBcJ_G0012724.1 mouse_genomes_project 4 87914524 87915019 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065530.1 MGP_BALBcJ_G0028222.1 mouse_genomes_project 4 42091665 42130180 + MGP_BALBcJ_P0065530 Dcaf10 protein_coding protein_coding MGP_BALBcJ_T0065531.1 MGP_BALBcJ_G0028222.1 mouse_genomes_project 4 42091684 42120557 + Dcaf10 protein_coding processed_transcript MGP_BALBcJ_T0065532.1 MGP_BALBcJ_G0028222.1 mouse_genomes_project 4 42091746 42125366 + Dcaf10 protein_coding processed_transcript MGP_BALBcJ_T0065533.1 MGP_BALBcJ_G0028222.1 mouse_genomes_project 4 42120423 42126077 + MGP_BALBcJ_P0065533 Dcaf10 protein_coding protein_coding MGP_BALBcJ_T0064806.1 MGP_BALBcJ_G0028064.1 mouse_genomes_project 4 18456664 18523563 + Faxc protein_coding processed_transcript MGP_BALBcJ_T0064807.1 MGP_BALBcJ_G0028064.1 mouse_genomes_project 4 18456666 18524168 + MGP_BALBcJ_P0064807 Faxc protein_coding protein_coding MGP_BALBcJ_T0064808.1 MGP_BALBcJ_G0028064.1 mouse_genomes_project 4 18456668 18480612 + Faxc protein_coding processed_transcript MGP_BALBcJ_T0064809.1 MGP_BALBcJ_G0028064.1 mouse_genomes_project 4 18456692 18526255 + Faxc protein_coding processed_transcript MGP_BALBcJ_T0064810.1 MGP_BALBcJ_G0028064.1 mouse_genomes_project 4 18488961 18491313 + Faxc protein_coding processed_transcript MGP_BALBcJ_T0101144.1 MGP_BALBcJ_G0039180.1 mouse_genomes_project 4 80025671 80025790 + Gm24884 snoRNA snoRNA MGP_BALBcJ_T0099867.1 MGP_BALBcJ_G0037903.1 mouse_genomes_project 4 114247506 114247622 + Gm23287 snRNA snRNA MGP_BALBcJ_T0014780.1 MGP_BALBcJ_G0012877.1 mouse_genomes_project 4 136735891 136736760 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067658.1 MGP_BALBcJ_G0028730.1 mouse_genomes_project 4 121778427 121779300 - MGP_BALBcJ_P0067658 3100002H09Rik protein_coding protein_coding MGP_BALBcJ_T0064540.1 MGP_BALBcJ_G0028000.1 mouse_genomes_project 4 653784 658731 - MGP_BALBcJ_P0064540 Penk protein_coding protein_coding MGP_BALBcJ_T0064541.1 MGP_BALBcJ_G0028000.1 mouse_genomes_project 4 653785 659073 - MGP_BALBcJ_P0064541 Penk protein_coding protein_coding MGP_BALBcJ_T0064579.1 MGP_BALBcJ_G0028009.1 mouse_genomes_project 4 4993831 5068341 + MGP_BALBcJ_P0064579 Rab2a protein_coding protein_coding MGP_BALBcJ_T0010619.1 MGP_BALBcJ_G0008744.1 mouse_genomes_project 4 132687971 132688050 - Mir700 miRNA miRNA MGP_BALBcJ_T0099881.1 MGP_BALBcJ_G0037917.1 mouse_genomes_project 4 130118594 130118701 - Gm24913 snRNA snRNA MGP_BALBcJ_T0010584.1 MGP_BALBcJ_G0008709.1 mouse_genomes_project 4 85124668 85124754 + Mir491 miRNA miRNA MGP_BALBcJ_T0064574.1 MGP_BALBcJ_G0028007.1 mouse_genomes_project 4 3176299 3495353 - MGP_BALBcJ_P0064574 Tox protein_coding protein_coding MGP_BALBcJ_T0064575.1 MGP_BALBcJ_G0028007.1 mouse_genomes_project 4 3180396 3181702 - Tox protein_coding processed_transcript MGP_BALBcJ_T0064576.1 MGP_BALBcJ_G0028007.1 mouse_genomes_project 4 3235394 3496111 - Tox protein_coding retained_intron MGP_BALBcJ_T0064577.1 MGP_BALBcJ_G0028007.1 mouse_genomes_project 4 3323999 3495048 - Tox protein_coding retained_intron MGP_BALBcJ_T0066541.1 MGP_BALBcJ_G0028484.1 mouse_genomes_project 4 99975160 99999654 + MGP_BALBcJ_P0066541 Tctex1d1 protein_coding protein_coding MGP_BALBcJ_T0066542.1 MGP_BALBcJ_G0028484.1 mouse_genomes_project 4 99981247 99999884 + MGP_BALBcJ_P0066542 Tctex1d1 protein_coding protein_coding MGP_BALBcJ_T0066543.1 MGP_BALBcJ_G0028484.1 mouse_genomes_project 4 99983470 100000905 + MGP_BALBcJ_P0066543 Tctex1d1 protein_coding protein_coding MGP_BALBcJ_T0066544.1 MGP_BALBcJ_G0028484.1 mouse_genomes_project 4 99986704 99987771 + Tctex1d1 protein_coding processed_transcript MGP_BALBcJ_T0010576.1 MGP_BALBcJ_G0008701.1 mouse_genomes_project 4 42264955 42265023 - Gm22518 miRNA miRNA MGP_BALBcJ_T0014736.1 MGP_BALBcJ_G0012833.1 mouse_genomes_project 4 120781062 120781471 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004593.1 MGP_BALBcJ_G0003984.1 mouse_genomes_project 4 152718419 152725568 + Gm13111 antisense antisense MGP_BALBcJ_T0004412.1 MGP_BALBcJ_G0003845.1 mouse_genomes_project 4 16509861 16516837 - 4930480G23Rik antisense antisense MGP_BALBcJ_T0066616.1 MGP_BALBcJ_G0028505.1 mouse_genomes_project 4 103644123 103646594 + MGP_BALBcJ_P0066616 Pars2 protein_coding protein_coding MGP_BALBcJ_T0066617.1 MGP_BALBcJ_G0028505.1 mouse_genomes_project 4 103644152 103648335 + MGP_BALBcJ_P0066617 Pars2 protein_coding protein_coding MGP_BALBcJ_T0066618.1 MGP_BALBcJ_G0028505.1 mouse_genomes_project 4 103644157 103645921 + Pars2 protein_coding processed_transcript MGP_BALBcJ_T0066619.1 MGP_BALBcJ_G0028505.1 mouse_genomes_project 4 103644160 103648337 + MGP_BALBcJ_P0066619 Pars2 protein_coding protein_coding MGP_BALBcJ_T0014452.1 MGP_BALBcJ_G0012549.1 mouse_genomes_project 4 23766014 23766284 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068001.1 MGP_BALBcJ_G0028811.1 mouse_genomes_project 4 126861359 126862002 - Fam167b protein_coding processed_transcript MGP_BALBcJ_T0068002.1 MGP_BALBcJ_G0028811.1 mouse_genomes_project 4 126861359 126863094 - MGP_BALBcJ_P0068002 Fam167b protein_coding protein_coding MGP_BALBcJ_T0014416.1 MGP_BALBcJ_G0012513.1 mouse_genomes_project 4 13509386 13510359 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102556.1 MGP_BALBcJ_G0040372.1 mouse_genomes_project 4 142069649 142071790 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066212.1 MGP_BALBcJ_G0028395.1 mouse_genomes_project 4 83738780 83815592 + MGP_BALBcJ_P0066212 Dennd4c protein_coding protein_coding MGP_BALBcJ_T0066213.1 MGP_BALBcJ_G0028395.1 mouse_genomes_project 4 83738780 83836659 + MGP_BALBcJ_P0066213 Dennd4c protein_coding protein_coding MGP_BALBcJ_T0066214.1 MGP_BALBcJ_G0028395.1 mouse_genomes_project 4 83757929 83835111 + MGP_BALBcJ_P0066214 Dennd4c protein_coding protein_coding MGP_BALBcJ_T0066215.1 MGP_BALBcJ_G0028395.1 mouse_genomes_project 4 83761551 83765303 + Dennd4c protein_coding processed_transcript MGP_BALBcJ_T0008000.1 MGP_BALBcJ_G0006528.1 mouse_genomes_project 4 148091025 148096801 - Gm13093 lincRNA lincRNA MGP_BALBcJ_T0014652.1 MGP_BALBcJ_G0012749.1 mouse_genomes_project 4 96445940 96446337 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064947.1 MGP_BALBcJ_G0028098.1 mouse_genomes_project 4 31357154 31381339 - MGP_BALBcJ_P0064947 Slc35a1 protein_coding protein_coding MGP_BALBcJ_T0064948.1 MGP_BALBcJ_G0028098.1 mouse_genomes_project 4 31357790 31377363 - Slc35a1 protein_coding processed_transcript MGP_BALBcJ_T0064949.1 MGP_BALBcJ_G0028098.1 mouse_genomes_project 4 31363395 31377270 - MGP_BALBcJ_P0064949 Slc35a1 protein_coding protein_coding MGP_BALBcJ_T0064950.1 MGP_BALBcJ_G0028098.1 mouse_genomes_project 4 31368881 31381156 - Slc35a1 protein_coding processed_transcript MGP_BALBcJ_T0064951.1 MGP_BALBcJ_G0028098.1 mouse_genomes_project 4 31377241 31381297 - Slc35a1 protein_coding processed_transcript MGP_BALBcJ_T0068208.1 MGP_BALBcJ_G0028846.1 mouse_genomes_project 4 129346807 129374434 - MGP_BALBcJ_P0068208 protein_coding protein_coding MGP_BALBcJ_T0068209.1 MGP_BALBcJ_G0028846.1 mouse_genomes_project 4 129348185 129374222 - MGP_BALBcJ_P0068209 protein_coding protein_coding MGP_BALBcJ_T0067104.1 MGP_BALBcJ_G0028600.1 mouse_genomes_project 4 113120130 113125925 - Rad54l protein_coding processed_transcript MGP_BALBcJ_T0067105.1 MGP_BALBcJ_G0028600.1 mouse_genomes_project 4 113122782 113149105 - MGP_BALBcJ_P0067105 Rad54l protein_coding protein_coding MGP_BALBcJ_T0067106.1 MGP_BALBcJ_G0028600.1 mouse_genomes_project 4 113122841 113149079 - MGP_BALBcJ_P0067106 Rad54l protein_coding protein_coding MGP_BALBcJ_T0067107.1 MGP_BALBcJ_G0028600.1 mouse_genomes_project 4 113135708 113148402 - Rad54l protein_coding processed_transcript MGP_BALBcJ_T0067108.1 MGP_BALBcJ_G0028600.1 mouse_genomes_project 4 113137002 113138496 - Rad54l protein_coding processed_transcript MGP_BALBcJ_T0067109.1 MGP_BALBcJ_G0028600.1 mouse_genomes_project 4 113143411 113149110 - Rad54l protein_coding processed_transcript MGP_BALBcJ_T0098369.1 MGP_BALBcJ_G0036423.1 mouse_genomes_project 4 33685475 33685813 - pseudogene pseudogene MGP_BALBcJ_T0007805.1 MGP_BALBcJ_G0006379.1 mouse_genomes_project 4 39763707 39765189 + Gm26643 lincRNA lincRNA MGP_BALBcJ_T0099833.1 MGP_BALBcJ_G0037869.1 mouse_genomes_project 4 46285610 46285714 + Gm26424 snRNA snRNA MGP_BALBcJ_T0065757.1 MGP_BALBcJ_G0028286.1 mouse_genomes_project 4 52319279 52324641 - MGP_BALBcJ_P0065757 Klf4 protein_coding protein_coding MGP_BALBcJ_T0065758.1 MGP_BALBcJ_G0028286.1 mouse_genomes_project 4 52322424 52323592 - MGP_BALBcJ_P0065758 Klf4 protein_coding protein_coding MGP_BALBcJ_T0065759.1 MGP_BALBcJ_G0028286.1 mouse_genomes_project 4 52322533 52324628 - MGP_BALBcJ_P0065759 Klf4 protein_coding protein_coding MGP_BALBcJ_T0014548.1 MGP_BALBcJ_G0012645.1 mouse_genomes_project 4 52967823 52968139 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067415.1 MGP_BALBcJ_G0028669.1 mouse_genomes_project 4 116027953 116035256 + MGP_BALBcJ_P0067415 Lao1 protein_coding protein_coding MGP_BALBcJ_T0067416.1 MGP_BALBcJ_G0028669.1 mouse_genomes_project 4 116031739 116034427 + Lao1 protein_coding processed_transcript MGP_BALBcJ_T0068029.1 MGP_BALBcJ_G0028814.1 mouse_genomes_project 4 126893348 126899253 - MGP_BALBcJ_P0068029 Dcdc2b protein_coding protein_coding MGP_BALBcJ_T0068030.1 MGP_BALBcJ_G0028814.1 mouse_genomes_project 4 126893546 126894266 - Dcdc2b protein_coding retained_intron MGP_BALBcJ_T0068031.1 MGP_BALBcJ_G0028814.1 mouse_genomes_project 4 126893765 126899250 - MGP_BALBcJ_P0068031 Dcdc2b protein_coding protein_coding MGP_BALBcJ_T0014451.1 MGP_BALBcJ_G0012548.1 mouse_genomes_project 4 23653003 23653251 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007844.1 MGP_BALBcJ_G0006411.1 mouse_genomes_project 4 64998468 65114774 + lincRNA lincRNA MGP_BALBcJ_T0004503.1 MGP_BALBcJ_G0003914.1 mouse_genomes_project 4 116199807 116200517 - Gm12867 antisense antisense MGP_BALBcJ_T0069274.1 MGP_BALBcJ_G0029111.1 mouse_genomes_project 4 146580886 146610669 + MGP_BALBcJ_P0069274 Gm572 protein_coding protein_coding MGP_BALBcJ_T0069115.1 MGP_BALBcJ_G0029067.1 mouse_genomes_project 4 141900628 141957086 - MGP_BALBcJ_P0069115 protein_coding protein_coding MGP_BALBcJ_T0069411.1 MGP_BALBcJ_G0029137.1 mouse_genomes_project 4 148848789 148863936 + MGP_BALBcJ_P0069411 Errfi1 protein_coding protein_coding MGP_BALBcJ_T0069412.1 MGP_BALBcJ_G0029137.1 mouse_genomes_project 4 148849943 148850685 + Errfi1 protein_coding processed_transcript MGP_BALBcJ_T0069413.1 MGP_BALBcJ_G0029137.1 mouse_genomes_project 4 148849943 148863931 + MGP_BALBcJ_P0069413 Errfi1 protein_coding protein_coding MGP_BALBcJ_T0102539.1 MGP_BALBcJ_G0040355.1 mouse_genomes_project 4 118476949 118481540 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014500.1 MGP_BALBcJ_G0012597.1 mouse_genomes_project 4 37441985 37442432 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014397.1 MGP_BALBcJ_G0012494.1 mouse_genomes_project 4 9909838 9910210 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099889.1 MGP_BALBcJ_G0037925.1 mouse_genomes_project 4 138370327 138370443 + Gm26226 snRNA snRNA MGP_BALBcJ_T0068120.1 MGP_BALBcJ_G0028829.1 mouse_genomes_project 4 127558470 127580872 - MGP_BALBcJ_P0068120 Serinc2 protein_coding protein_coding MGP_BALBcJ_T0068121.1 MGP_BALBcJ_G0028829.1 mouse_genomes_project 4 127558470 127580504 - MGP_BALBcJ_P0068121 Serinc2 protein_coding protein_coding MGP_BALBcJ_T0068122.1 MGP_BALBcJ_G0028829.1 mouse_genomes_project 4 127558872 127584469 - MGP_BALBcJ_P0068122 Serinc2 protein_coding protein_coding MGP_BALBcJ_T0068123.1 MGP_BALBcJ_G0028829.1 mouse_genomes_project 4 127568318 127580818 - MGP_BALBcJ_P0068123 Serinc2 protein_coding protein_coding MGP_BALBcJ_T0068124.1 MGP_BALBcJ_G0028829.1 mouse_genomes_project 4 127568933 127580831 - MGP_BALBcJ_P0068124 Serinc2 protein_coding protein_coding MGP_BALBcJ_T0069002.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138906696 138929301 + MGP_BALBcJ_P0069002 Zbtb17 protein_coding protein_coding MGP_BALBcJ_T0069003.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138906726 138930006 + Zbtb17 protein_coding processed_transcript MGP_BALBcJ_T0069004.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138906741 138929301 + Zbtb17 protein_coding processed_transcript MGP_BALBcJ_T0069005.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138906748 138921405 + Zbtb17 protein_coding processed_transcript MGP_BALBcJ_T0069006.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138925458 138927123 + Zbtb17 protein_coding processed_transcript MGP_BALBcJ_T0069007.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138926893 138928144 + Zbtb17 protein_coding processed_transcript MGP_BALBcJ_T0069008.1 MGP_BALBcJ_G0029032.1 mouse_genomes_project 4 138927490 138929145 + Zbtb17 protein_coding processed_transcript MGP_BALBcJ_T0065363.1 MGP_BALBcJ_G0028189.1 mouse_genomes_project 4 40294111 40298832 + MGP_BALBcJ_P0065363 Creb3 protein_coding protein_coding MGP_BALBcJ_T0065364.1 MGP_BALBcJ_G0028189.1 mouse_genomes_project 4 40294591 40298569 + MGP_BALBcJ_P0065364 Creb3 protein_coding protein_coding MGP_BALBcJ_T0065365.1 MGP_BALBcJ_G0028189.1 mouse_genomes_project 4 40294725 40297091 + MGP_BALBcJ_P0065365 Creb3 protein_coding protein_coding MGP_BALBcJ_T0065366.1 MGP_BALBcJ_G0028189.1 mouse_genomes_project 4 40295045 40298299 + Creb3 protein_coding retained_intron MGP_BALBcJ_T0065367.1 MGP_BALBcJ_G0028189.1 mouse_genomes_project 4 40295208 40297325 + Creb3 protein_coding retained_intron MGP_BALBcJ_T0065368.1 MGP_BALBcJ_G0028189.1 mouse_genomes_project 4 40297786 40298476 + Creb3 protein_coding retained_intron MGP_BALBcJ_T0014577.1 MGP_BALBcJ_G0012674.1 mouse_genomes_project 4 69821444 69822042 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068672.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133768052 133856026 + MGP_BALBcJ_P0068672 Luzp1 protein_coding protein_coding MGP_BALBcJ_T0068673.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133768052 133856022 + MGP_BALBcJ_P0068673 Luzp1 protein_coding protein_coding MGP_BALBcJ_T0068674.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133768095 133820817 + Luzp1 protein_coding retained_intron MGP_BALBcJ_T0068675.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133768142 133847381 + MGP_BALBcJ_P0068675 Luzp1 protein_coding protein_coding MGP_BALBcJ_T0068676.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133820500 133853105 + MGP_BALBcJ_P0068676 Luzp1 protein_coding protein_coding MGP_BALBcJ_T0068677.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133847067 133856025 + MGP_BALBcJ_P0068677 Luzp1 protein_coding protein_coding MGP_BALBcJ_T0068678.1 MGP_BALBcJ_G0028951.1 mouse_genomes_project 4 133851975 133861492 + MGP_BALBcJ_P0068678 Luzp1 protein_coding protein_coding MGP_BALBcJ_T0065852.1 MGP_BALBcJ_G0028309.1 mouse_genomes_project 4 55793946 55815791 - MGP_BALBcJ_P0065852 Ptgr1 protein_coding protein_coding MGP_BALBcJ_T0067751.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123370946 123410186 - MGP_BALBcJ_P0067751 Thrap3 protein_coding unknown_likely_coding MGP_BALBcJ_T0067752.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123371946 123381947 - MGP_BALBcJ_P0067752 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067753.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123371960 123373882 - Thrap3 protein_coding processed_transcript MGP_BALBcJ_T0067754.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123373453 123380005 - MGP_BALBcJ_P0067754 Thrap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067755.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123379320 123410118 - MGP_BALBcJ_P0067755 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067756.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123381865 123385027 - MGP_BALBcJ_P0067756 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067757.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123385274 123410141 - Thrap3 protein_coding retained_intron MGP_BALBcJ_T0067758.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123387067 123401059 - MGP_BALBcJ_P0067758 Thrap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067759.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123387295 123408670 - MGP_BALBcJ_P0067759 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067760.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123387304 123410118 - MGP_BALBcJ_P0067760 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067761.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123392689 123410152 - Thrap3 protein_coding retained_intron MGP_BALBcJ_T0067762.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123392870 123410188 - Thrap3 protein_coding retained_intron MGP_BALBcJ_T0067763.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123393108 123410176 - MGP_BALBcJ_P0067763 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067764.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123393114 123409905 - MGP_BALBcJ_P0067764 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067765.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123393120 123409919 - MGP_BALBcJ_P0067765 Thrap3 protein_coding protein_coding MGP_BALBcJ_T0067766.1 MGP_BALBcJ_G0028756.1 mouse_genomes_project 4 123400586 123410199 - Thrap3 protein_coding processed_transcript MGP_BALBcJ_T0065866.1 MGP_BALBcJ_G0028315.1 mouse_genomes_project 4 56144436 56145720 - Susd1 protein_coding retained_intron MGP_BALBcJ_T0065867.1 MGP_BALBcJ_G0028315.1 mouse_genomes_project 4 56144436 56273893 - MGP_BALBcJ_P0065867 Susd1 protein_coding protein_coding MGP_BALBcJ_T0065868.1 MGP_BALBcJ_G0028315.1 mouse_genomes_project 4 56144507 56273893 - MGP_BALBcJ_P0065868 Susd1 protein_coding protein_coding MGP_BALBcJ_T0065869.1 MGP_BALBcJ_G0028315.1 mouse_genomes_project 4 56159028 56162790 - Susd1 protein_coding retained_intron MGP_BALBcJ_T0065870.1 MGP_BALBcJ_G0028315.1 mouse_genomes_project 4 56161724 56194560 - Susd1 protein_coding retained_intron MGP_BALBcJ_T0069937.1 MGP_BALBcJ_G0029231.1 mouse_genomes_project 4 154298649 154304201 + MGP_BALBcJ_P0069937 Perm1 protein_coding protein_coding MGP_BALBcJ_T0068799.1 MGP_BALBcJ_G0028979.1 mouse_genomes_project 4 135767810 135770248 - MGP_BALBcJ_P0068799 Fam43b protein_coding protein_coding MGP_BALBcJ_T0102538.1 MGP_BALBcJ_G0040354.1 mouse_genomes_project 4 115904798 115905752 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007849.1 MGP_BALBcJ_G0006416.1 mouse_genomes_project 4 78915985 78917883 - Gm12914 lincRNA lincRNA MGP_BALBcJ_T0099871.1 MGP_BALBcJ_G0037907.1 mouse_genomes_project 4 121506619 121506723 - Gm22983 snRNA snRNA MGP_BALBcJ_T0004521.1 MGP_BALBcJ_G0003928.1 mouse_genomes_project 4 125506107 125508058 + Hmgb4os antisense antisense MGP_BALBcJ_T0064880.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29314844 29433910 + MGP_BALBcJ_P0064880 Mdn1 protein_coding protein_coding MGP_BALBcJ_T0064881.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29314844 29433920 + MGP_BALBcJ_P0064881 Mdn1 protein_coding protein_coding MGP_BALBcJ_T0064882.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29314908 29322046 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064883.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29329436 29337489 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064884.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29353930 29355029 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064885.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29363078 29433901 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064886.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29381353 29389898 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064887.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29384317 29386673 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064888.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29409067 29412433 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064889.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29409067 29410154 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0064890.1 MGP_BALBcJ_G0028081.1 mouse_genomes_project 4 29421365 29423995 + Mdn1 protein_coding processed_transcript MGP_BALBcJ_T0066365.1 MGP_BALBcJ_G0028442.1 mouse_genomes_project 4 93151386 93188136 - MGP_BALBcJ_P0066365 Cyp2j7 protein_coding protein_coding MGP_BALBcJ_T0014567.1 MGP_BALBcJ_G0012664.1 mouse_genomes_project 4 65277660 65279705 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066300.1 MGP_BALBcJ_G0028429.1 mouse_genomes_project 4 91492267 91549111 - MGP_BALBcJ_P0066300 Caap1 protein_coding protein_coding MGP_BALBcJ_T0066301.1 MGP_BALBcJ_G0028429.1 mouse_genomes_project 4 91542032 91549081 - Caap1 protein_coding processed_transcript MGP_BALBcJ_T0067578.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119974723 120000868 - MGP_BALBcJ_P0067578 Cap1 protein_coding protein_coding MGP_BALBcJ_T0067579.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119974723 120001001 - MGP_BALBcJ_P0067579 Cap1 protein_coding protein_coding MGP_BALBcJ_T0067580.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119974723 120001013 - MGP_BALBcJ_P0067580 Cap1 protein_coding protein_coding MGP_BALBcJ_T0067581.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119977382 119979597 - Cap1 protein_coding processed_transcript MGP_BALBcJ_T0067582.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119982296 120000922 - MGP_BALBcJ_P0067582 Cap1 protein_coding protein_coding MGP_BALBcJ_T0067583.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119985644 120000817 - Cap1 protein_coding processed_transcript MGP_BALBcJ_T0067584.1 MGP_BALBcJ_G0028710.1 mouse_genomes_project 4 119986735 120000821 - Cap1 protein_coding processed_transcript MGP_BALBcJ_T0018025.1 MGP_BALBcJ_G0015494.1 mouse_genomes_project 4 86409760 86429046 + Gm12609 processed_transcript processed_transcript MGP_BALBcJ_T0065815.1 MGP_BALBcJ_G0028301.1 mouse_genomes_project 4 54763672 54776677 - MGP_BALBcJ_P0065815 Txn1 protein_coding protein_coding MGP_BALBcJ_T0014643.1 MGP_BALBcJ_G0012740.1 mouse_genomes_project 4 93028722 93029002 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066815.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105475125 105578476 + MGP_BALBcJ_P0066815 Zcchc11 protein_coding protein_coding MGP_BALBcJ_T0066816.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105475125 105494624 + MGP_BALBcJ_P0066816 Zcchc11 protein_coding protein_coding MGP_BALBcJ_T0066817.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105475709 105578482 + MGP_BALBcJ_P0066817 Zcchc11 protein_coding protein_coding MGP_BALBcJ_T0066818.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105494551 105542395 + MGP_BALBcJ_P0066818 Zcchc11 protein_coding protein_coding MGP_BALBcJ_T0066819.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105544700 105547530 + Zcchc11 protein_coding processed_transcript MGP_BALBcJ_T0066820.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105560480 105566501 + Zcchc11 protein_coding processed_transcript MGP_BALBcJ_T0066821.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105560579 105561447 + Zcchc11 protein_coding processed_transcript MGP_BALBcJ_T0066822.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105560632 105561440 + Zcchc11 protein_coding processed_transcript MGP_BALBcJ_T0066823.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105567299 105573279 + Zcchc11 protein_coding processed_transcript MGP_BALBcJ_T0066824.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105573295 105578476 + Zcchc11 protein_coding processed_transcript MGP_BALBcJ_T0066825.1 MGP_BALBcJ_G0028537.1 mouse_genomes_project 4 105573579 105578115 + MGP_BALBcJ_P0066825 Zcchc11 protein_coding protein_coding MGP_BALBcJ_T0068803.1 MGP_BALBcJ_G0028981.1 mouse_genomes_project 4 135830921 135838081 + MGP_BALBcJ_P0068803 Camk2n1 protein_coding protein_coding MGP_BALBcJ_T0069237.1 MGP_BALBcJ_G0029108.1 mouse_genomes_project 4 146528463 146531596 + MGP_BALBcJ_P0069237 Srm protein_coding protein_coding MGP_BALBcJ_T0069238.1 MGP_BALBcJ_G0029108.1 mouse_genomes_project 4 146528877 146531166 + Srm protein_coding retained_intron MGP_BALBcJ_T0069239.1 MGP_BALBcJ_G0029108.1 mouse_genomes_project 4 146530860 146531970 + Srm protein_coding processed_transcript MGP_BALBcJ_T0069093.1 MGP_BALBcJ_G0029055.1 mouse_genomes_project 4 141073430 141104408 + MGP_BALBcJ_P0069093 protein_coding protein_coding MGP_BALBcJ_T0069094.1 MGP_BALBcJ_G0029055.1 mouse_genomes_project 4 141085974 141104409 + MGP_BALBcJ_P0069094 protein_coding protein_coding MGP_BALBcJ_T0014636.1 MGP_BALBcJ_G0012733.1 mouse_genomes_project 4 90636425 90636735 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065419.1 MGP_BALBcJ_G0028204.1 mouse_genomes_project 4 40586328 40590610 + MGP_BALBcJ_P0065419 Olfr155 protein_coding protein_coding MGP_BALBcJ_T0065420.1 MGP_BALBcJ_G0028204.1 mouse_genomes_project 4 40589106 40590803 + MGP_BALBcJ_P0065420 Olfr155 protein_coding protein_coding MGP_BALBcJ_T0007777.1 MGP_BALBcJ_G0006352.1 mouse_genomes_project 4 8450727 8458488 + Gm26895 lincRNA lincRNA MGP_BALBcJ_T0066699.1 MGP_BALBcJ_G0028518.1 mouse_genomes_project 4 104257404 104284289 + MGP_BALBcJ_P0066699 Hspb11 protein_coding protein_coding MGP_BALBcJ_T0066700.1 MGP_BALBcJ_G0028518.1 mouse_genomes_project 4 104257709 104268445 + Hspb11 protein_coding processed_transcript MGP_BALBcJ_T0066701.1 MGP_BALBcJ_G0028518.1 mouse_genomes_project 4 104257714 104284390 + MGP_BALBcJ_P0066701 Hspb11 protein_coding protein_coding MGP_BALBcJ_T0066702.1 MGP_BALBcJ_G0028518.1 mouse_genomes_project 4 104257736 104284380 + MGP_BALBcJ_P0066702 Hspb11 protein_coding protein_coding MGP_BALBcJ_T0066703.1 MGP_BALBcJ_G0028518.1 mouse_genomes_project 4 104266237 104284384 + Hspb11 protein_coding processed_transcript MGP_BALBcJ_T0069175.1 MGP_BALBcJ_G0029092.1 mouse_genomes_project 4 145870998 145877418 + MGP_BALBcJ_P0069175 2510039O18Rik protein_coding protein_coding MGP_BALBcJ_T0014398.1 MGP_BALBcJ_G0012495.1 mouse_genomes_project 4 10072381 10073117 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064685.1 MGP_BALBcJ_G0028029.1 mouse_genomes_project 4 8515831 8564117 - MGP_BALBcJ_P0064685 Tmem67 protein_coding protein_coding MGP_BALBcJ_T0064686.1 MGP_BALBcJ_G0028029.1 mouse_genomes_project 4 8515839 8564098 - MGP_BALBcJ_P0064686 Tmem67 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064687.1 MGP_BALBcJ_G0028029.1 mouse_genomes_project 4 8516121 8566168 - MGP_BALBcJ_P0064687 Tmem67 protein_coding protein_coding MGP_BALBcJ_T0064688.1 MGP_BALBcJ_G0028029.1 mouse_genomes_project 4 8534861 8564167 - Tmem67 protein_coding retained_intron MGP_BALBcJ_T0064689.1 MGP_BALBcJ_G0028029.1 mouse_genomes_project 4 8545341 8564087 - Tmem67 protein_coding retained_intron MGP_BALBcJ_T0064690.1 MGP_BALBcJ_G0028029.1 mouse_genomes_project 4 8554747 8564092 - Tmem67 protein_coding retained_intron MGP_BALBcJ_T0001411.1 MGP_BALBcJ_G0001333.1 mouse_genomes_project 4 96403369 96412986 - TEC TEC MGP_BALBcJ_T0066009.1 MGP_BALBcJ_G0028357.1 mouse_genomes_project 4 62091621 62326857 + MGP_BALBcJ_P0066009 Pappa protein_coding protein_coding MGP_BALBcJ_T0066010.1 MGP_BALBcJ_G0028357.1 mouse_genomes_project 4 62091989 62321073 + MGP_BALBcJ_P0066010 Pappa protein_coding unknown_likely_coding MGP_BALBcJ_T0099826.1 MGP_BALBcJ_G0037862.1 mouse_genomes_project 4 37949058 37949161 - Gm24650 snRNA snRNA MGP_BALBcJ_T0014751.1 MGP_BALBcJ_G0012848.1 mouse_genomes_project 4 124520245 124520927 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066996.1 MGP_BALBcJ_G0028569.1 mouse_genomes_project 4 111145741 111203014 + MGP_BALBcJ_P0066996 Skint11 protein_coding protein_coding MGP_BALBcJ_T0066997.1 MGP_BALBcJ_G0028569.1 mouse_genomes_project 4 111145741 111203014 + MGP_BALBcJ_P0066997 Skint11 protein_coding protein_coding MGP_BALBcJ_T0014657.1 MGP_BALBcJ_G0012754.1 mouse_genomes_project 4 97563280 97563737 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064678.1 MGP_BALBcJ_G0028027.1 mouse_genomes_project 4 8428243 8436512 - MGP_BALBcJ_P0064678 Pdp1 protein_coding protein_coding MGP_BALBcJ_T0064679.1 MGP_BALBcJ_G0028027.1 mouse_genomes_project 4 8429866 8436041 - MGP_BALBcJ_P0064679 Pdp1 protein_coding protein_coding MGP_BALBcJ_T0064680.1 MGP_BALBcJ_G0028027.1 mouse_genomes_project 4 8429866 8435881 - MGP_BALBcJ_P0064680 Pdp1 protein_coding protein_coding MGP_BALBcJ_T0064681.1 MGP_BALBcJ_G0028027.1 mouse_genomes_project 4 8429866 8435987 - MGP_BALBcJ_P0064681 Pdp1 protein_coding protein_coding MGP_BALBcJ_T0064682.1 MGP_BALBcJ_G0028027.1 mouse_genomes_project 4 8429866 8436487 - MGP_BALBcJ_P0064682 Pdp1 protein_coding protein_coding MGP_BALBcJ_T0064683.1 MGP_BALBcJ_G0028027.1 mouse_genomes_project 4 8429870 8436480 - MGP_BALBcJ_P0064683 Pdp1 protein_coding protein_coding MGP_BALBcJ_T0099894.1 MGP_BALBcJ_G0037930.1 mouse_genomes_project 4 147472672 147472776 - Gm24381 snRNA snRNA MGP_BALBcJ_T0068351.1 MGP_BALBcJ_G0028877.1 mouse_genomes_project 4 130695147 130702684 - MGP_BALBcJ_P0068351 Trnp1 protein_coding protein_coding MGP_BALBcJ_T0068352.1 MGP_BALBcJ_G0028877.1 mouse_genomes_project 4 130695165 130701853 - Trnp1 protein_coding processed_transcript MGP_BALBcJ_T0065639.1 MGP_BALBcJ_G0028249.1 mouse_genomes_project 4 44835914 44877205 + MGP_BALBcJ_P0065639 Nr4a3 protein_coding protein_coding MGP_BALBcJ_T0065640.1 MGP_BALBcJ_G0028249.1 mouse_genomes_project 4 44835992 44840927 + Nr4a3 protein_coding processed_transcript MGP_BALBcJ_T0065641.1 MGP_BALBcJ_G0028249.1 mouse_genomes_project 4 44839875 44877207 + MGP_BALBcJ_P0065641 Nr4a3 protein_coding protein_coding MGP_BALBcJ_T0065642.1 MGP_BALBcJ_G0028249.1 mouse_genomes_project 4 44842009 44847501 + Nr4a3 protein_coding processed_transcript MGP_BALBcJ_T0004567.1 MGP_BALBcJ_G0003964.1 mouse_genomes_project 4 146001096 146002721 - Gm13201 antisense antisense MGP_BALBcJ_T0004568.1 MGP_BALBcJ_G0003964.1 mouse_genomes_project 4 146001311 146004797 - Gm13201 antisense antisense MGP_BALBcJ_T0007827.1 MGP_BALBcJ_G0006396.1 mouse_genomes_project 4 52358882 52404457 + Gm12511 lincRNA lincRNA MGP_BALBcJ_T0102523.1 MGP_BALBcJ_G0040339.1 mouse_genomes_project 4 93146256 93146434 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0064521.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 469990 474626 + MGP_BALBcJ_P0064521 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064522.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 469990 474621 + MGP_BALBcJ_P0064522 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064523.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 469992 474570 + MGP_BALBcJ_P0064523 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064524.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470016 474148 + MGP_BALBcJ_P0064524 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064525.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470016 474619 + MGP_BALBcJ_P0064525 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064526.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470016 482136 + MGP_BALBcJ_P0064526 Chchd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064527.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470016 474626 + MGP_BALBcJ_P0064527 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064528.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470016 474626 + MGP_BALBcJ_P0064528 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064529.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470022 474602 + MGP_BALBcJ_P0064529 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064530.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470145 474504 + MGP_BALBcJ_P0064530 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064531.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470524 472517 + Chchd7 protein_coding retained_intron MGP_BALBcJ_T0064532.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 470602 474624 + MGP_BALBcJ_P0064532 Chchd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064533.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 471951 474623 + MGP_BALBcJ_P0064533 Chchd7 protein_coding protein_coding MGP_BALBcJ_T0064534.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 474511 481301 + Chchd7 protein_coding processed_transcript MGP_BALBcJ_T0064535.1 MGP_BALBcJ_G0027997.1 mouse_genomes_project 4 477899 480962 + Chchd7 protein_coding retained_intron MGP_BALBcJ_T0065974.1 MGP_BALBcJ_G0028346.1 mouse_genomes_project 4 60306889 60317692 + MGP_BALBcJ_P0065974 Orm3 protein_coding protein_coding MGP_BALBcJ_T0065862.1 MGP_BALBcJ_G0028314.1 mouse_genomes_project 4 56017091 56050198 + MGP_BALBcJ_P0065862 Ugcg protein_coding protein_coding MGP_BALBcJ_T0065863.1 MGP_BALBcJ_G0028314.1 mouse_genomes_project 4 56017389 56039568 + Ugcg protein_coding processed_transcript MGP_BALBcJ_T0065864.1 MGP_BALBcJ_G0028314.1 mouse_genomes_project 4 56039084 56041276 + Ugcg protein_coding processed_transcript MGP_BALBcJ_T0065865.1 MGP_BALBcJ_G0028314.1 mouse_genomes_project 4 56040020 56041660 + Ugcg protein_coding processed_transcript MGP_BALBcJ_T0068322.1 MGP_BALBcJ_G0028870.1 mouse_genomes_project 4 130401417 130411148 + Cd164l2 protein_coding processed_transcript MGP_BALBcJ_T0068323.1 MGP_BALBcJ_G0028870.1 mouse_genomes_project 4 130402191 130413918 + MGP_BALBcJ_P0068323 Cd164l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0068324.1 MGP_BALBcJ_G0028870.1 mouse_genomes_project 4 130410188 130413917 + MGP_BALBcJ_P0068324 Cd164l2 protein_coding protein_coding MGP_BALBcJ_T0068325.1 MGP_BALBcJ_G0028870.1 mouse_genomes_project 4 130410825 130413917 + Cd164l2 protein_coding processed_transcript MGP_BALBcJ_T0068326.1 MGP_BALBcJ_G0028870.1 mouse_genomes_project 4 130410911 130413604 + Cd164l2 protein_coding retained_intron MGP_BALBcJ_T0010620.1 MGP_BALBcJ_G0008745.1 mouse_genomes_project 4 132784855 132784984 - Gm25317 miRNA miRNA MGP_BALBcJ_T0069177.1 MGP_BALBcJ_G0029094.1 mouse_genomes_project 4 145930746 145932104 + MGP_BALBcJ_P0069177 Nppa protein_coding protein_coding MGP_BALBcJ_T0068918.1 MGP_BALBcJ_G0029011.1 mouse_genomes_project 4 138169694 138184867 - MGP_BALBcJ_P0068918 Padi6 protein_coding protein_coding MGP_BALBcJ_T0068919.1 MGP_BALBcJ_G0029011.1 mouse_genomes_project 4 138174572 138175296 - Padi6 protein_coding processed_transcript MGP_BALBcJ_T0068920.1 MGP_BALBcJ_G0029011.1 mouse_genomes_project 4 138177956 138183876 - MGP_BALBcJ_P0068920 Padi6 protein_coding protein_coding MGP_BALBcJ_T0067482.1 MGP_BALBcJ_G0028681.1 mouse_genomes_project 4 116500846 116505609 - Ppcs protein_coding retained_intron MGP_BALBcJ_T0067483.1 MGP_BALBcJ_G0028681.1 mouse_genomes_project 4 116500846 116505671 - MGP_BALBcJ_P0067483 Ppcs protein_coding protein_coding MGP_BALBcJ_T0066104.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79263738 79475485 - MGP_BALBcJ_P0066104 Nfib protein_coding protein_coding MGP_BALBcJ_T0066105.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79293667 79476035 - Nfib protein_coding retained_intron MGP_BALBcJ_T0066106.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79295436 79476035 - Nfib protein_coding retained_intron MGP_BALBcJ_T0066107.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79320625 79479850 - Nfib protein_coding retained_intron MGP_BALBcJ_T0066108.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79466717 79479865 - Nfib protein_coding retained_intron MGP_BALBcJ_T0066109.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79469054 79676624 - MGP_BALBcJ_P0066109 Nfib protein_coding protein_coding MGP_BALBcJ_T0066110.1 MGP_BALBcJ_G0028379.1 mouse_genomes_project 4 79469277 79470050 - Nfib protein_coding processed_transcript MGP_BALBcJ_T0018014.1 MGP_BALBcJ_G0015487.1 mouse_genomes_project 4 54576268 54582736 - Gm12526 processed_transcript processed_transcript MGP_BALBcJ_T0007914.1 MGP_BALBcJ_G0006468.1 mouse_genomes_project 4 121474038 121482663 - 1700021L23Rik lincRNA lincRNA MGP_BALBcJ_T0007923.1 MGP_BALBcJ_G0006473.1 mouse_genomes_project 4 123082804 123093916 - 2610028E06Rik lincRNA lincRNA MGP_BALBcJ_T0007924.1 MGP_BALBcJ_G0006473.1 mouse_genomes_project 4 123082804 123117232 - 2610028E06Rik lincRNA lincRNA MGP_BALBcJ_T0007925.1 MGP_BALBcJ_G0006473.1 mouse_genomes_project 4 123083150 123117339 - 2610028E06Rik lincRNA lincRNA MGP_BALBcJ_T0007926.1 MGP_BALBcJ_G0006473.1 mouse_genomes_project 4 123085368 123112054 - 2610028E06Rik lincRNA lincRNA MGP_BALBcJ_T0007927.1 MGP_BALBcJ_G0006473.1 mouse_genomes_project 4 123113475 123117339 - 2610028E06Rik lincRNA lincRNA MGP_BALBcJ_T0067721.1 MGP_BALBcJ_G0028748.1 mouse_genomes_project 4 122690792 122909237 + MGP_BALBcJ_P0067721 Grik3 protein_coding protein_coding MGP_BALBcJ_T0007859.1 MGP_BALBcJ_G0006424.1 mouse_genomes_project 4 84313229 84316138 + Gm12600 lincRNA lincRNA MGP_BALBcJ_T0014667.1 MGP_BALBcJ_G0012764.1 mouse_genomes_project 4 100942130 100942371 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065710.1 MGP_BALBcJ_G0028270.1 mouse_genomes_project 4 49301867 49302173 - MGP_BALBcJ_P0065710 Vma21-ps protein_coding protein_coding MGP_BALBcJ_T0101165.1 MGP_BALBcJ_G0039201.1 mouse_genomes_project 4 124037803 124037933 - Gm24161 snoRNA snoRNA MGP_BALBcJ_T0010642.1 MGP_BALBcJ_G0008767.1 mouse_genomes_project 4 154312934 154312991 - Mir7658 miRNA miRNA MGP_BALBcJ_T0101170.1 MGP_BALBcJ_G0039206.1 mouse_genomes_project 4 128008629 128008759 - Gm22660 snoRNA snoRNA MGP_BALBcJ_T0014589.1 MGP_BALBcJ_G0012686.1 mouse_genomes_project 4 72283089 72283804 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014386.1 MGP_BALBcJ_G0012483.1 mouse_genomes_project 4 7023518 7023809 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004475.1 MGP_BALBcJ_G0003893.1 mouse_genomes_project 4 103578567 103580894 - Gm12744 antisense antisense MGP_BALBcJ_T0067414.1 MGP_BALBcJ_G0028668.1 mouse_genomes_project 4 115990884 115993221 - MGP_BALBcJ_P0067414 Olfr1328 protein_coding protein_coding MGP_BALBcJ_T0067194.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113827790 113841621 - MGP_BALBcJ_P0067194 Toe1 protein_coding protein_coding MGP_BALBcJ_T0067195.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113838073 113841713 - MGP_BALBcJ_P0067195 Toe1 protein_coding protein_coding MGP_BALBcJ_T0067196.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113838083 113839265 - Toe1 protein_coding processed_transcript MGP_BALBcJ_T0067197.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113838746 113839678 - Toe1 protein_coding retained_intron MGP_BALBcJ_T0067198.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113838854 113840596 - MGP_BALBcJ_P0067198 Toe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067199.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113839348 113840673 - Toe1 protein_coding retained_intron MGP_BALBcJ_T0067200.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113839783 113841679 - Toe1 protein_coding processed_transcript MGP_BALBcJ_T0067201.1 MGP_BALBcJ_G0028617.1 mouse_genomes_project 4 113839889 113841621 - Toe1 protein_coding retained_intron MGP_BALBcJ_T0065762.1 MGP_BALBcJ_G0028289.1 mouse_genomes_project 4 53539362 53540875 + MGP_BALBcJ_P0065762 Actl7a protein_coding protein_coding MGP_BALBcJ_T0064804.1 MGP_BALBcJ_G0028063.1 mouse_genomes_project 4 18401072 18436981 + MGP_BALBcJ_P0064804 Coq3 protein_coding protein_coding MGP_BALBcJ_T0064805.1 MGP_BALBcJ_G0028063.1 mouse_genomes_project 4 18423600 18425334 + Coq3 protein_coding processed_transcript MGP_BALBcJ_T0068059.1 MGP_BALBcJ_G0028819.1 mouse_genomes_project 4 126963309 126983954 - MGP_BALBcJ_P0068059 Tmem39b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068060.1 MGP_BALBcJ_G0028819.1 mouse_genomes_project 4 126963309 126983996 - MGP_BALBcJ_P0068060 Tmem39b protein_coding protein_coding MGP_BALBcJ_T0068061.1 MGP_BALBcJ_G0028819.1 mouse_genomes_project 4 126963553 126965895 - Tmem39b protein_coding retained_intron MGP_BALBcJ_T0068062.1 MGP_BALBcJ_G0028819.1 mouse_genomes_project 4 126979183 126983778 - MGP_BALBcJ_P0068062 Tmem39b protein_coding protein_coding MGP_BALBcJ_T0068063.1 MGP_BALBcJ_G0028819.1 mouse_genomes_project 4 126979259 126983902 - MGP_BALBcJ_P0068063 Tmem39b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068877.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136743236 136864532 + MGP_BALBcJ_P0068877 Ubr4 protein_coding protein_coding MGP_BALBcJ_T0068879.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136775139 136884574 + MGP_BALBcJ_P0068879 Ubr4 protein_coding protein_coding MGP_BALBcJ_T0068880.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136775139 136884632 + MGP_BALBcJ_P0068880 Ubr4 protein_coding protein_coding MGP_BALBcJ_T0068881.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136775149 136792433 + Ubr4 protein_coding processed_transcript MGP_BALBcJ_T0068882.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136809249 136846743 + MGP_BALBcJ_P0068882 Ubr4 protein_coding protein_coding MGP_BALBcJ_T0068883.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136811004 136811819 + Ubr4 protein_coding retained_intron MGP_BALBcJ_T0068884.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136829801 136832957 + MGP_BALBcJ_P0068884 Ubr4 protein_coding protein_coding MGP_BALBcJ_T0068885.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136858039 136858756 + Ubr4 protein_coding retained_intron MGP_BALBcJ_T0068886.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136871863 136875603 + Ubr4 protein_coding retained_intron MGP_BALBcJ_T0068887.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136873736 136877396 + Ubr4 protein_coding processed_transcript MGP_BALBcJ_T0068888.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136873919 136875846 + Ubr4 protein_coding retained_intron MGP_BALBcJ_T0068889.1 MGP_BALBcJ_G0029001.1 mouse_genomes_project 4 136875172 136877478 + Ubr4 protein_coding retained_intron MGP_BALBcJ_T0004405.1 MGP_BALBcJ_G0003840.1 mouse_genomes_project 4 7967444 7968828 - Gm11831 antisense antisense MGP_BALBcJ_T0004492.1 MGP_BALBcJ_G0003904.1 mouse_genomes_project 4 112896856 112897116 - Gm29434 antisense antisense MGP_BALBcJ_T0065796.1 MGP_BALBcJ_G0028296.1 mouse_genomes_project 4 53993792 54106073 - MGP_BALBcJ_P0065796 Ptpn3 protein_coding protein_coding MGP_BALBcJ_T0065797.1 MGP_BALBcJ_G0028296.1 mouse_genomes_project 4 54021228 54024937 - Ptpn3 protein_coding processed_transcript MGP_BALBcJ_T0065798.1 MGP_BALBcJ_G0028296.1 mouse_genomes_project 4 54047817 54104611 - MGP_BALBcJ_P0065798 Ptpn3 protein_coding protein_coding MGP_BALBcJ_T0065799.1 MGP_BALBcJ_G0028296.1 mouse_genomes_project 4 54058624 54105151 - Ptpn3 protein_coding processed_transcript MGP_BALBcJ_T0065800.1 MGP_BALBcJ_G0028296.1 mouse_genomes_project 4 54068731 54105743 - MGP_BALBcJ_P0065800 Ptpn3 protein_coding protein_coding MGP_BALBcJ_T0065801.1 MGP_BALBcJ_G0028296.1 mouse_genomes_project 4 54073724 54104992 - MGP_BALBcJ_P0065801 Ptpn3 protein_coding protein_coding MGP_BALBcJ_T0014431.1 MGP_BALBcJ_G0012528.1 mouse_genomes_project 4 18536109 18537537 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102503.1 MGP_BALBcJ_G0040319.1 mouse_genomes_project 4 38713191 38715016 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066088.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78278777 78437271 - MGP_BALBcJ_P0066088 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066089.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78278782 78437273 - MGP_BALBcJ_P0066089 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066090.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78278782 78335254 - MGP_BALBcJ_P0066090 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066091.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78278789 78437188 - MGP_BALBcJ_P0066091 Mpdz protein_coding unknown_likely_coding MGP_BALBcJ_T0066092.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78279508 78285763 - Mpdz protein_coding retained_intron MGP_BALBcJ_T0066093.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78279611 78295812 - MGP_BALBcJ_P0066093 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066094.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78283217 78284925 - Mpdz protein_coding retained_intron MGP_BALBcJ_T0066095.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78283601 78292840 - MGP_BALBcJ_P0066095 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066096.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78284802 78288297 - Mpdz protein_coding retained_intron MGP_BALBcJ_T0066097.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78290118 78293057 - Mpdz protein_coding retained_intron MGP_BALBcJ_T0066098.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78292786 78293402 - Mpdz protein_coding retained_intron MGP_BALBcJ_T0066099.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78306917 78320582 - MGP_BALBcJ_P0066099 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066100.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78320404 78332423 - MGP_BALBcJ_P0066100 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066101.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78320426 78335212 - MGP_BALBcJ_P0066101 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066102.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78348935 78363152 - MGP_BALBcJ_P0066102 Mpdz protein_coding protein_coding MGP_BALBcJ_T0066103.1 MGP_BALBcJ_G0028378.1 mouse_genomes_project 4 78411271 78437281 - Mpdz protein_coding retained_intron MGP_BALBcJ_T0064498.1 MGP_BALBcJ_G0027991.1 mouse_genomes_project 4 4164 33524 - MGP_BALBcJ_P0064498 Tmem68 protein_coding protein_coding MGP_BALBcJ_T0064499.1 MGP_BALBcJ_G0027991.1 mouse_genomes_project 4 4164 33480 - MGP_BALBcJ_P0064499 Tmem68 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064500.1 MGP_BALBcJ_G0027991.1 mouse_genomes_project 4 5451 7273 - Tmem68 protein_coding retained_intron MGP_BALBcJ_T0064501.1 MGP_BALBcJ_G0027991.1 mouse_genomes_project 4 27216 33475 - Tmem68 protein_coding retained_intron MGP_BALBcJ_T0064502.1 MGP_BALBcJ_G0027991.1 mouse_genomes_project 4 27235 33475 - Tmem68 protein_coding processed_transcript MGP_BALBcJ_T0064503.1 MGP_BALBcJ_G0027991.1 mouse_genomes_project 4 27410 32404 - MGP_BALBcJ_P0064503 Tmem68 protein_coding protein_coding MGP_BALBcJ_T0067374.1 MGP_BALBcJ_G0028649.1 mouse_genomes_project 4 115490952 115495478 + MGP_BALBcJ_P0067374 Elovl1 protein_coding protein_coding MGP_BALBcJ_T0067375.1 MGP_BALBcJ_G0028649.1 mouse_genomes_project 4 115490984 115491685 + Elovl1 protein_coding processed_transcript MGP_BALBcJ_T0067376.1 MGP_BALBcJ_G0028649.1 mouse_genomes_project 4 115491028 115494805 + Elovl1 protein_coding processed_transcript MGP_BALBcJ_T0067377.1 MGP_BALBcJ_G0028649.1 mouse_genomes_project 4 115491062 115493929 + Elovl1 protein_coding processed_transcript MGP_BALBcJ_T0014367.1 MGP_BALBcJ_G0012464.1 mouse_genomes_project 4 186981 187581 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101703.1 MGP_BALBcJ_G0039682.1 mouse_genomes_project 4 56675804 56676347 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0099886.1 MGP_BALBcJ_G0037922.1 mouse_genomes_project 4 134655009 134655098 + Gm25772 snRNA snRNA MGP_BALBcJ_T0068361.1 MGP_BALBcJ_G0028880.1 mouse_genomes_project 4 130762199 130765368 + MGP_BALBcJ_P0068361 Nr0b2 protein_coding protein_coding MGP_BALBcJ_T0004589.1 MGP_BALBcJ_G0003981.1 mouse_genomes_project 4 152164430 152169295 + Trp73os antisense antisense MGP_BALBcJ_T0064758.1 MGP_BALBcJ_G0028053.1 mouse_genomes_project 4 16341269 16368139 + MGP_BALBcJ_P0064758 Slc7a13 protein_coding protein_coding MGP_BALBcJ_T0068979.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138697226 138704130 + MGP_BALBcJ_P0068979 Arhgef19 protein_coding protein_coding MGP_BALBcJ_T0068980.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138697377 138705208 + Arhgef19 protein_coding retained_intron MGP_BALBcJ_T0068981.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138700582 138704074 + MGP_BALBcJ_P0068981 Arhgef19 protein_coding protein_coding MGP_BALBcJ_T0068982.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138700596 138715286 + MGP_BALBcJ_P0068982 Arhgef19 protein_coding protein_coding MGP_BALBcJ_T0068983.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138700620 138704719 + MGP_BALBcJ_P0068983 Arhgef19 protein_coding protein_coding MGP_BALBcJ_T0068984.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138703152 138705162 + MGP_BALBcJ_P0068984 Arhgef19 protein_coding protein_coding MGP_BALBcJ_T0068985.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138704113 138705827 + MGP_BALBcJ_P0068985 Arhgef19 protein_coding protein_coding MGP_BALBcJ_T0068986.1 MGP_BALBcJ_G0029025.1 mouse_genomes_project 4 138704643 138705694 + Arhgef19 protein_coding retained_intron MGP_BALBcJ_T0069700.1 MGP_BALBcJ_G0029187.1 mouse_genomes_project 4 153147854 153153272 + MGP_BALBcJ_P0069700 Pex10 protein_coding protein_coding MGP_BALBcJ_T0069701.1 MGP_BALBcJ_G0029187.1 mouse_genomes_project 4 153147892 153149720 + Pex10 protein_coding processed_transcript MGP_BALBcJ_T0069702.1 MGP_BALBcJ_G0029187.1 mouse_genomes_project 4 153147895 153153020 + Pex10 protein_coding processed_transcript MGP_BALBcJ_T0069703.1 MGP_BALBcJ_G0029187.1 mouse_genomes_project 4 153147897 153148862 + Pex10 protein_coding processed_transcript MGP_BALBcJ_T0069704.1 MGP_BALBcJ_G0029187.1 mouse_genomes_project 4 153147897 153149955 + Pex10 protein_coding processed_transcript MGP_BALBcJ_T0067503.1 MGP_BALBcJ_G0028687.1 mouse_genomes_project 4 116739547 116741676 - MGP_BALBcJ_P0067503 Guca2b protein_coding protein_coding MGP_BALBcJ_T0067504.1 MGP_BALBcJ_G0028687.1 mouse_genomes_project 4 116739547 116741849 - MGP_BALBcJ_P0067504 Guca2b protein_coding protein_coding MGP_BALBcJ_T0067308.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114925226 114939187 - MGP_BALBcJ_P0067308 B4galt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067314.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114929046 114939523 - MGP_BALBcJ_P0067314 B4galt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067315.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114929156 114939534 - MGP_BALBcJ_P0067315 B4galt2 protein_coding protein_coding MGP_BALBcJ_T0067316.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114929327 114939144 - MGP_BALBcJ_P0067316 B4galt2 protein_coding protein_coding MGP_BALBcJ_T0067318.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114933589 114939187 - MGP_BALBcJ_P0067318 B4galt2 protein_coding protein_coding MGP_BALBcJ_T0067319.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114937050 114939266 - B4galt2 protein_coding processed_transcript MGP_BALBcJ_T0067320.1 MGP_BALBcJ_G0028639.1 mouse_genomes_project 4 114937424 114938323 - MGP_BALBcJ_P0067320 B4galt2 protein_coding protein_coding MGP_BALBcJ_T0004478.1 MGP_BALBcJ_G0003896.1 mouse_genomes_project 4 104353539 104355852 - Gm12869 antisense antisense MGP_BALBcJ_T0067076.1 MGP_BALBcJ_G0028595.1 mouse_genomes_project 4 112933529 112944041 - MGP_BALBcJ_P0067076 Dmbx1 protein_coding protein_coding MGP_BALBcJ_T0067077.1 MGP_BALBcJ_G0028595.1 mouse_genomes_project 4 112933529 112958045 - MGP_BALBcJ_P0067077 Dmbx1 protein_coding protein_coding MGP_BALBcJ_T0067078.1 MGP_BALBcJ_G0028595.1 mouse_genomes_project 4 112933530 112958045 - MGP_BALBcJ_P0067078 Dmbx1 protein_coding protein_coding MGP_BALBcJ_T0101127.1 MGP_BALBcJ_G0039163.1 mouse_genomes_project 4 53481206 53481338 - Gm26144 snoRNA snoRNA MGP_BALBcJ_T0066195.1 MGP_BALBcJ_G0028391.1 mouse_genomes_project 4 83397033 83477768 - Saxo1 protein_coding processed_transcript MGP_BALBcJ_T0066196.1 MGP_BALBcJ_G0028391.1 mouse_genomes_project 4 83397033 83496890 - MGP_BALBcJ_P0066196 Saxo1 protein_coding protein_coding MGP_BALBcJ_T0066197.1 MGP_BALBcJ_G0028391.1 mouse_genomes_project 4 83420919 83496582 - Saxo1 protein_coding processed_transcript MGP_BALBcJ_T0066198.1 MGP_BALBcJ_G0028391.1 mouse_genomes_project 4 83423507 83496915 - Saxo1 protein_coding processed_transcript MGP_BALBcJ_T0014449.1 MGP_BALBcJ_G0012546.1 mouse_genomes_project 4 23043355 23043572 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101147.1 MGP_BALBcJ_G0039183.1 mouse_genomes_project 4 90582568 90582696 - Gm23443 snoRNA snoRNA MGP_BALBcJ_T0007807.1 MGP_BALBcJ_G0006381.1 mouse_genomes_project 4 40464445 40468957 + lincRNA lincRNA MGP_BALBcJ_T0068253.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718111 129730157 + MGP_BALBcJ_P0068253 Dnajc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068254.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718111 129737655 + MGP_BALBcJ_P0068254 Dnajc8 protein_coding protein_coding MGP_BALBcJ_T0068255.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718128 129737574 + Dnajc8 protein_coding retained_intron MGP_BALBcJ_T0068256.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718137 129727714 + MGP_BALBcJ_P0068256 Dnajc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068257.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718138 129737110 + MGP_BALBcJ_P0068257 Dnajc8 protein_coding protein_coding MGP_BALBcJ_T0068258.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718142 129734540 + MGP_BALBcJ_P0068258 Dnajc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068259.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718142 129737133 + MGP_BALBcJ_P0068259 Dnajc8 protein_coding protein_coding MGP_BALBcJ_T0068260.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718201 129737052 + MGP_BALBcJ_P0068260 Dnajc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068261.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718220 129737371 + MGP_BALBcJ_P0068261 Dnajc8 protein_coding protein_coding MGP_BALBcJ_T0068262.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129718589 129728131 + Dnajc8 protein_coding retained_intron MGP_BALBcJ_T0068263.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129730169 129737107 + MGP_BALBcJ_P0068263 Dnajc8 protein_coding protein_coding MGP_BALBcJ_T0068264.1 MGP_BALBcJ_G0028856.1 mouse_genomes_project 4 129735232 129737356 + Dnajc8 protein_coding retained_intron MGP_BALBcJ_T0098372.1 MGP_BALBcJ_G0036426.1 mouse_genomes_project 4 121067595 121069456 - pseudogene pseudogene MGP_BALBcJ_T0066913.1 MGP_BALBcJ_G0028553.1 mouse_genomes_project 4 106472431 106498184 - MGP_BALBcJ_P0066913 Rnf11 protein_coding protein_coding MGP_BALBcJ_T0066914.1 MGP_BALBcJ_G0028553.1 mouse_genomes_project 4 106474232 106498491 - MGP_BALBcJ_P0066914 Rnf11 protein_coding protein_coding MGP_BALBcJ_T0066915.1 MGP_BALBcJ_G0028553.1 mouse_genomes_project 4 106475617 106506241 - MGP_BALBcJ_P0066915 Rnf11 protein_coding protein_coding MGP_BALBcJ_T0067381.1 MGP_BALBcJ_G0028651.1 mouse_genomes_project 4 115505359 115520083 - MGP_BALBcJ_P0067381 Mpl protein_coding protein_coding MGP_BALBcJ_T0067382.1 MGP_BALBcJ_G0028651.1 mouse_genomes_project 4 115505361 115520065 - MGP_BALBcJ_P0067382 Mpl protein_coding protein_coding MGP_BALBcJ_T0067383.1 MGP_BALBcJ_G0028651.1 mouse_genomes_project 4 115506216 115520027 - MGP_BALBcJ_P0067383 Mpl protein_coding protein_coding MGP_BALBcJ_T0067384.1 MGP_BALBcJ_G0028651.1 mouse_genomes_project 4 115506373 115520020 - MGP_BALBcJ_P0067384 Mpl protein_coding protein_coding MGP_BALBcJ_T0004465.1 MGP_BALBcJ_G0003885.1 mouse_genomes_project 4 95299611 95301064 + 0610025J13Rik antisense antisense MGP_BALBcJ_T0004466.1 MGP_BALBcJ_G0003885.1 mouse_genomes_project 4 95299661 95310005 + 0610025J13Rik antisense antisense MGP_BALBcJ_T0004467.1 MGP_BALBcJ_G0003885.1 mouse_genomes_project 4 95299661 95310005 + 0610025J13Rik antisense antisense MGP_BALBcJ_T0069102.1 MGP_BALBcJ_G0029061.1 mouse_genomes_project 4 141425224 141433039 + MGP_BALBcJ_P0069102 protein_coding protein_coding MGP_BALBcJ_T0065074.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38172569 38242931 - MGP_BALBcJ_P0065074 Kif24 protein_coding protein_coding MGP_BALBcJ_T0065075.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38173435 38242939 - MGP_BALBcJ_P0065075 Kif24 protein_coding protein_coding MGP_BALBcJ_T0065076.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38177009 38192457 - Kif24 protein_coding processed_transcript MGP_BALBcJ_T0065077.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38186056 38187542 - Kif24 protein_coding processed_transcript MGP_BALBcJ_T0065078.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38196226 38242931 - Kif24 protein_coding processed_transcript MGP_BALBcJ_T0065079.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38211327 38242937 - MGP_BALBcJ_P0065079 Kif24 protein_coding protein_coding MGP_BALBcJ_T0065080.1 MGP_BALBcJ_G0028130.1 mouse_genomes_project 4 38229968 38242937 - Kif24 protein_coding processed_transcript MGP_BALBcJ_T0014603.1 MGP_BALBcJ_G0012700.1 mouse_genomes_project 4 77451177 77451661 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065193.1 MGP_BALBcJ_G0028164.1 mouse_genomes_project 4 39439863 39441691 - MGP_BALBcJ_P0065193 protein_coding protein_coding MGP_BALBcJ_T0068350.1 MGP_BALBcJ_G0028876.1 mouse_genomes_project 4 130684244 130692094 + MGP_BALBcJ_P0068350 Fam46b protein_coding protein_coding MGP_BALBcJ_T0065163.1 MGP_BALBcJ_G0028150.1 mouse_genomes_project 4 38569238 38575985 - MGP_BALBcJ_P0065163 protein_coding protein_coding MGP_BALBcJ_T0065177.1 MGP_BALBcJ_G0028150.1 mouse_genomes_project 4 38575694 38576280 - MGP_BALBcJ_P0065177 protein_coding protein_coding MGP_BALBcJ_T0069131.1 MGP_BALBcJ_G0029082.1 mouse_genomes_project 4 142643522 142670488 + Dhrs3 protein_coding processed_transcript MGP_BALBcJ_T0069132.1 MGP_BALBcJ_G0029082.1 mouse_genomes_project 4 142643528 142670414 + MGP_BALBcJ_P0069132 Dhrs3 protein_coding protein_coding MGP_BALBcJ_T0069133.1 MGP_BALBcJ_G0029082.1 mouse_genomes_project 4 142643610 142680009 + MGP_BALBcJ_P0069133 Dhrs3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069134.1 MGP_BALBcJ_G0029082.1 mouse_genomes_project 4 142643906 142680019 + MGP_BALBcJ_P0069134 Dhrs3 protein_coding protein_coding MGP_BALBcJ_T0069135.1 MGP_BALBcJ_G0029082.1 mouse_genomes_project 4 142669394 142670488 + Dhrs3 protein_coding retained_intron MGP_BALBcJ_T0064504.1 MGP_BALBcJ_G0027992.1 mouse_genomes_project 4 33545 75712 + MGP_BALBcJ_P0064504 Tgs1 protein_coding protein_coding MGP_BALBcJ_T0064505.1 MGP_BALBcJ_G0027992.1 mouse_genomes_project 4 33620 42599 + Tgs1 protein_coding retained_intron MGP_BALBcJ_T0064506.1 MGP_BALBcJ_G0027992.1 mouse_genomes_project 4 52261 57361 + Tgs1 protein_coding processed_transcript MGP_BALBcJ_T0064507.1 MGP_BALBcJ_G0027992.1 mouse_genomes_project 4 57308 61569 + Tgs1 protein_coding retained_intron MGP_BALBcJ_T0064508.1 MGP_BALBcJ_G0027992.1 mouse_genomes_project 4 64655 73457 + Tgs1 protein_coding retained_intron MGP_BALBcJ_T0065935.1 MGP_BALBcJ_G0028337.1 mouse_genomes_project 4 59444318 59455694 - Alad protein_coding processed_transcript MGP_BALBcJ_T0065936.1 MGP_BALBcJ_G0028337.1 mouse_genomes_project 4 59444318 59455731 - MGP_BALBcJ_P0065936 Alad protein_coding protein_coding MGP_BALBcJ_T0065937.1 MGP_BALBcJ_G0028337.1 mouse_genomes_project 4 59444318 59455707 - MGP_BALBcJ_P0065937 Alad protein_coding protein_coding MGP_BALBcJ_T0065973.1 MGP_BALBcJ_G0028345.1 mouse_genomes_project 4 60293921 60297525 + MGP_BALBcJ_P0065973 Orm1 protein_coding protein_coding MGP_BALBcJ_T0065596.1 MGP_BALBcJ_G0028239.1 mouse_genomes_project 4 43270836 43311140 - MGP_BALBcJ_P0065596 Trim14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065597.1 MGP_BALBcJ_G0028239.1 mouse_genomes_project 4 43271874 43309432 - Trim14 protein_coding processed_transcript MGP_BALBcJ_T0065598.1 MGP_BALBcJ_G0028239.1 mouse_genomes_project 4 43283900 43311159 - MGP_BALBcJ_P0065598 Trim14 protein_coding protein_coding MGP_BALBcJ_T0065599.1 MGP_BALBcJ_G0028239.1 mouse_genomes_project 4 43284441 43309460 - Trim14 protein_coding processed_transcript MGP_BALBcJ_T0065600.1 MGP_BALBcJ_G0028239.1 mouse_genomes_project 4 43286716 43311132 - MGP_BALBcJ_P0065600 Trim14 protein_coding protein_coding MGP_BALBcJ_T0065601.1 MGP_BALBcJ_G0028239.1 mouse_genomes_project 4 43295063 43309622 - Trim14 protein_coding processed_transcript MGP_BALBcJ_T0101133.1 MGP_BALBcJ_G0039169.1 mouse_genomes_project 4 59863875 59864009 + Gm25391 snoRNA snoRNA MGP_BALBcJ_T0014430.1 MGP_BALBcJ_G0012527.1 mouse_genomes_project 4 18185312 18185581 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007935.1 MGP_BALBcJ_G0006480.1 mouse_genomes_project 4 126302962 126310843 - 1700086P04Rik lincRNA lincRNA MGP_BALBcJ_T0010581.1 MGP_BALBcJ_G0008706.1 mouse_genomes_project 4 64581864 64581935 + Gm44497 miRNA miRNA MGP_BALBcJ_T0068484.1 MGP_BALBcJ_G0028906.1 mouse_genomes_project 4 131570440 131570769 - MGP_BALBcJ_P0068484 Gm8186 protein_coding protein_coding MGP_BALBcJ_T0007973.1 MGP_BALBcJ_G0006502.1 mouse_genomes_project 4 133640435 133642019 - Gm27022 lincRNA lincRNA MGP_BALBcJ_T0014552.1 MGP_BALBcJ_G0012649.1 mouse_genomes_project 4 55288679 55289253 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064542.1 MGP_BALBcJ_G0028001.1 mouse_genomes_project 4 1284299 1314940 - MGP_BALBcJ_P0064542 Impad1 protein_coding protein_coding MGP_BALBcJ_T0014608.1 MGP_BALBcJ_G0012705.1 mouse_genomes_project 4 80440982 80441245 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018012.1 MGP_BALBcJ_G0015486.1 mouse_genomes_project 4 50016388 50028993 - 4930412L05Rik processed_transcript processed_transcript MGP_BALBcJ_T0018013.1 MGP_BALBcJ_G0015486.1 mouse_genomes_project 4 50026124 50029289 - 4930412L05Rik processed_transcript processed_transcript MGP_BALBcJ_T0004532.1 MGP_BALBcJ_G0003937.1 mouse_genomes_project 4 131093361 131098147 + Gm12977 antisense antisense MGP_BALBcJ_T0004533.1 MGP_BALBcJ_G0003937.1 mouse_genomes_project 4 131094091 131097373 + Gm12977 antisense antisense MGP_BALBcJ_T0064975.1 MGP_BALBcJ_G0028106.1 mouse_genomes_project 4 31852490 31854440 + MGP_BALBcJ_P0064975 Ifnk protein_coding protein_coding MGP_BALBcJ_T0004556.1 MGP_BALBcJ_G0003956.1 mouse_genomes_project 4 139317318 139319979 + Ctrcos antisense antisense MGP_BALBcJ_T0010564.1 MGP_BALBcJ_G0008689.1 mouse_genomes_project 4 27357244 27357353 - Gm22831 miRNA miRNA MGP_BALBcJ_T0010599.1 MGP_BALBcJ_G0008724.1 mouse_genomes_project 4 117859192 117859284 + Mir30f miRNA miRNA MGP_BALBcJ_T0064691.1 MGP_BALBcJ_G0028030.1 mouse_genomes_project 4 8565533 8570729 + protein_coding processed_transcript MGP_BALBcJ_T0064692.1 MGP_BALBcJ_G0028030.1 mouse_genomes_project 4 8565536 8573441 + MGP_BALBcJ_P0064692 protein_coding protein_coding MGP_BALBcJ_T0064693.1 MGP_BALBcJ_G0028030.1 mouse_genomes_project 4 8565554 8571069 + protein_coding processed_transcript MGP_BALBcJ_T0064694.1 MGP_BALBcJ_G0028030.1 mouse_genomes_project 4 8565586 8573472 + MGP_BALBcJ_P0064694 protein_coding protein_coding MGP_BALBcJ_T0067694.1 MGP_BALBcJ_G0028741.1 mouse_genomes_project 4 122094870 122113882 - MGP_BALBcJ_P0067694 Cdca8 protein_coding unknown_likely_coding MGP_BALBcJ_T0067695.1 MGP_BALBcJ_G0028741.1 mouse_genomes_project 4 122095513 122113841 - MGP_BALBcJ_P0067695 Cdca8 protein_coding protein_coding MGP_BALBcJ_T0067696.1 MGP_BALBcJ_G0028741.1 mouse_genomes_project 4 122095958 122113375 - Cdca8 protein_coding processed_transcript MGP_BALBcJ_T0067697.1 MGP_BALBcJ_G0028741.1 mouse_genomes_project 4 122100026 122113749 - Cdca8 protein_coding processed_transcript MGP_BALBcJ_T0067698.1 MGP_BALBcJ_G0028741.1 mouse_genomes_project 4 122100206 122113810 - Cdca8 protein_coding retained_intron MGP_BALBcJ_T0067699.1 MGP_BALBcJ_G0028741.1 mouse_genomes_project 4 122103084 122116279 - MGP_BALBcJ_P0067699 Cdca8 protein_coding protein_coding MGP_BALBcJ_T0014615.1 MGP_BALBcJ_G0012712.1 mouse_genomes_project 4 82182416 82182725 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011544.1 MGP_BALBcJ_G0009669.1 mouse_genomes_project 4 44385030 44385150 + Gm27668 misc_RNA misc_RNA MGP_BALBcJ_T0065819.1 MGP_BALBcJ_G0028303.1 mouse_genomes_project 4 54857742 55027211 - MGP_BALBcJ_P0065819 Svep1 protein_coding protein_coding MGP_BALBcJ_T0065820.1 MGP_BALBcJ_G0028303.1 mouse_genomes_project 4 54963376 55027227 - Svep1 protein_coding processed_transcript MGP_BALBcJ_T0065821.1 MGP_BALBcJ_G0028303.1 mouse_genomes_project 4 54964737 55027474 - Svep1 protein_coding processed_transcript MGP_BALBcJ_T0065822.1 MGP_BALBcJ_G0028303.1 mouse_genomes_project 4 54999057 55027303 - Svep1 protein_coding processed_transcript MGP_BALBcJ_T0067574.1 MGP_BALBcJ_G0028709.1 mouse_genomes_project 4 119951923 119974755 + MGP_BALBcJ_P0067574 Ppt1 protein_coding protein_coding MGP_BALBcJ_T0067575.1 MGP_BALBcJ_G0028709.1 mouse_genomes_project 4 119951927 119964655 + MGP_BALBcJ_P0067575 Ppt1 protein_coding protein_coding MGP_BALBcJ_T0067576.1 MGP_BALBcJ_G0028709.1 mouse_genomes_project 4 119951931 119974852 + MGP_BALBcJ_P0067576 Ppt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067577.1 MGP_BALBcJ_G0028709.1 mouse_genomes_project 4 119951935 119965939 + MGP_BALBcJ_P0067577 Ppt1 protein_coding protein_coding MGP_BALBcJ_T0004544.1 MGP_BALBcJ_G0003946.1 mouse_genomes_project 4 135506506 135507431 - 1700095J12Rik antisense antisense MGP_BALBcJ_T0014481.1 MGP_BALBcJ_G0012578.1 mouse_genomes_project 4 31153325 31153617 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014747.1 MGP_BALBcJ_G0012844.1 mouse_genomes_project 4 124208046 124208211 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014420.1 MGP_BALBcJ_G0012517.1 mouse_genomes_project 4 14702844 14703066 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068817.1 MGP_BALBcJ_G0028985.1 mouse_genomes_project 4 136133867 136141069 - MGP_BALBcJ_P0068817 Pla2g2f protein_coding protein_coding MGP_BALBcJ_T0066826.1 MGP_BALBcJ_G0028538.1 mouse_genomes_project 4 105582228 105586072 - Prpf38a protein_coding processed_transcript MGP_BALBcJ_T0066827.1 MGP_BALBcJ_G0028538.1 mouse_genomes_project 4 105583926 105598272 - MGP_BALBcJ_P0066827 Prpf38a protein_coding protein_coding MGP_BALBcJ_T0066828.1 MGP_BALBcJ_G0028538.1 mouse_genomes_project 4 105583929 105592484 - Prpf38a protein_coding processed_transcript MGP_BALBcJ_T0014784.1 MGP_BALBcJ_G0012881.1 mouse_genomes_project 4 140645731 140646190 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007797.1 MGP_BALBcJ_G0006371.1 mouse_genomes_project 4 30826413 30830360 + Gm12753 lincRNA lincRNA MGP_BALBcJ_T0011536.1 MGP_BALBcJ_G0009661.1 mouse_genomes_project 4 15232935 15233266 - Gm24419 misc_RNA misc_RNA MGP_BALBcJ_T0007829.1 MGP_BALBcJ_G0006398.1 mouse_genomes_project 4 52774054 52801005 - Gm12519 lincRNA lincRNA MGP_BALBcJ_T0004491.1 MGP_BALBcJ_G0003903.1 mouse_genomes_project 4 112126405 112130211 + Cyp4x1os antisense antisense MGP_BALBcJ_T0067110.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113149259 113164332 + Pomgnt1 protein_coding processed_transcript MGP_BALBcJ_T0067112.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113162718 113185352 + MGP_BALBcJ_P0067112 Pomgnt1 protein_coding protein_coding MGP_BALBcJ_T0067113.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113162733 113185353 + Pomgnt1 protein_coding retained_intron MGP_BALBcJ_T0067115.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113163236 113185348 + MGP_BALBcJ_P0067115 Pomgnt1 protein_coding protein_coding MGP_BALBcJ_T0067116.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113176021 113185348 + MGP_BALBcJ_P0067116 Pomgnt1 protein_coding protein_coding MGP_BALBcJ_T0067117.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113176028 113185348 + MGP_BALBcJ_P0067117 Pomgnt1 protein_coding protein_coding MGP_BALBcJ_T0067118.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113176934 113184941 + MGP_BALBcJ_P0067118 Pomgnt1 protein_coding protein_coding MGP_BALBcJ_T0067119.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113180098 113181296 + Pomgnt1 protein_coding processed_transcript MGP_BALBcJ_T0067120.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113180822 113184498 + Pomgnt1 protein_coding retained_intron MGP_BALBcJ_T0067121.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113181440 113182157 + Pomgnt1 protein_coding retained_intron MGP_BALBcJ_T0067122.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113181452 113184562 + Pomgnt1 protein_coding processed_transcript MGP_BALBcJ_T0067123.1 MGP_BALBcJ_G0028601.1 mouse_genomes_project 4 113182895 113184529 + Pomgnt1 protein_coding retained_intron MGP_BALBcJ_T0101163.1 MGP_BALBcJ_G0039199.1 mouse_genomes_project 4 120436008 120436139 + Gm25788 snoRNA snoRNA MGP_BALBcJ_T0068139.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807347 127930482 + MGP_BALBcJ_P0068139 Pum1 protein_coding protein_coding MGP_BALBcJ_T0068140.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807385 127930480 + MGP_BALBcJ_P0068140 Pum1 protein_coding protein_coding MGP_BALBcJ_T0068141.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807385 127930480 + MGP_BALBcJ_P0068141 Pum1 protein_coding protein_coding MGP_BALBcJ_T0068142.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807392 127867781 + Pum1 protein_coding retained_intron MGP_BALBcJ_T0068143.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807393 127895892 + MGP_BALBcJ_P0068143 Pum1 protein_coding protein_coding MGP_BALBcJ_T0068144.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807412 127929186 + MGP_BALBcJ_P0068144 Pum1 protein_coding protein_coding MGP_BALBcJ_T0068145.1 MGP_BALBcJ_G0028835.1 mouse_genomes_project 4 127807432 127929174 + MGP_BALBcJ_P0068145 Pum1 protein_coding protein_coding MGP_BALBcJ_T0065647.1 MGP_BALBcJ_G0028251.1 mouse_genomes_project 4 44984804 45072166 - MGP_BALBcJ_P0065647 Erp44 protein_coding protein_coding MGP_BALBcJ_T0065648.1 MGP_BALBcJ_G0028251.1 mouse_genomes_project 4 44985971 44988506 - Erp44 protein_coding processed_transcript MGP_BALBcJ_T0065649.1 MGP_BALBcJ_G0028251.1 mouse_genomes_project 4 45033278 45039438 - Erp44 protein_coding processed_transcript MGP_BALBcJ_T0065650.1 MGP_BALBcJ_G0028251.1 mouse_genomes_project 4 45035921 45072060 - Erp44 protein_coding processed_transcript MGP_BALBcJ_T0101148.1 MGP_BALBcJ_G0039184.1 mouse_genomes_project 4 91093469 91093598 + Gm23836 snoRNA snoRNA MGP_BALBcJ_T0065938.1 MGP_BALBcJ_G0028338.1 mouse_genomes_project 4 59458576 59462410 - MGP_BALBcJ_P0065938 Pole3 protein_coding protein_coding MGP_BALBcJ_T0065939.1 MGP_BALBcJ_G0028338.1 mouse_genomes_project 4 59458576 59462410 - MGP_BALBcJ_P0065939 Pole3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065940.1 MGP_BALBcJ_G0028338.1 mouse_genomes_project 4 59461676 59462380 - Pole3 protein_coding retained_intron MGP_BALBcJ_T0069162.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145803078 145834753 - MGP_BALBcJ_P0069162 Mfn2 protein_coding protein_coding MGP_BALBcJ_T0069163.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145803078 145834770 - MGP_BALBcJ_P0069163 Mfn2 protein_coding protein_coding MGP_BALBcJ_T0069164.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145803495 145834764 - MGP_BALBcJ_P0069164 Mfn2 protein_coding protein_coding MGP_BALBcJ_T0069165.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145810956 145834764 - MGP_BALBcJ_P0069165 Mfn2 protein_coding protein_coding MGP_BALBcJ_T0069166.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145815170 145816986 - Mfn2 protein_coding processed_transcript MGP_BALBcJ_T0069167.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145816796 145833461 - MGP_BALBcJ_P0069167 Mfn2 protein_coding protein_coding MGP_BALBcJ_T0069168.1 MGP_BALBcJ_G0029090.1 mouse_genomes_project 4 145824683 145834724 - MGP_BALBcJ_P0069168 Mfn2 protein_coding protein_coding MGP_BALBcJ_T0065113.1 MGP_BALBcJ_G0028141.1 mouse_genomes_project 4 38522636 38530643 - MGP_BALBcJ_P0065113 Arid3c protein_coding protein_coding MGP_BALBcJ_T0065114.1 MGP_BALBcJ_G0028141.1 mouse_genomes_project 4 38522939 38529082 - MGP_BALBcJ_P0065114 Arid3c protein_coding protein_coding MGP_BALBcJ_T0065115.1 MGP_BALBcJ_G0028141.1 mouse_genomes_project 4 38522939 38529082 - MGP_BALBcJ_P0065115 Arid3c protein_coding protein_coding MGP_BALBcJ_T0065116.1 MGP_BALBcJ_G0028141.1 mouse_genomes_project 4 38528721 38530643 - MGP_BALBcJ_P0065116 Arid3c protein_coding protein_coding MGP_BALBcJ_T0065699.1 MGP_BALBcJ_G0028266.1 mouse_genomes_project 4 46476293 46666239 - MGP_BALBcJ_P0065699 Grin3a protein_coding protein_coding MGP_BALBcJ_T0065700.1 MGP_BALBcJ_G0028266.1 mouse_genomes_project 4 46476293 46666239 - MGP_BALBcJ_P0065700 Grin3a protein_coding protein_coding MGP_BALBcJ_T0065702.1 MGP_BALBcJ_G0028266.1 mouse_genomes_project 4 46518715 46533757 - Grin3a protein_coding processed_transcript MGP_BALBcJ_T0065703.1 MGP_BALBcJ_G0028266.1 mouse_genomes_project 4 46581346 46666434 - Grin3a protein_coding processed_transcript MGP_BALBcJ_T0066609.1 MGP_BALBcJ_G0028502.1 mouse_genomes_project 4 103552549 103580899 + MGP_BALBcJ_P0066609 Dhcr24 protein_coding protein_coding MGP_BALBcJ_T0067775.1 MGP_BALBcJ_G0028759.1 mouse_genomes_project 4 123499563 123527047 + MGP_BALBcJ_P0067775 Col8a2 protein_coding protein_coding MGP_BALBcJ_T0067776.1 MGP_BALBcJ_G0028759.1 mouse_genomes_project 4 123513220 123522502 + MGP_BALBcJ_P0067776 Col8a2 protein_coding protein_coding MGP_BALBcJ_T0011566.1 MGP_BALBcJ_G0009691.1 mouse_genomes_project 4 150225291 150225627 - Gm27500 misc_RNA misc_RNA MGP_BALBcJ_T0068461.1 MGP_BALBcJ_G0028900.1 mouse_genomes_project 4 131480713 131483020 - MGP_BALBcJ_P0068461 Zfp593 protein_coding protein_coding MGP_BALBcJ_T0068462.1 MGP_BALBcJ_G0028900.1 mouse_genomes_project 4 131480731 131482970 - Zfp593 protein_coding processed_transcript MGP_BALBcJ_T0066470.1 MGP_BALBcJ_G0028469.1 mouse_genomes_project 4 97742349 97969751 + MGP_BALBcJ_P0066470 Cachd1 protein_coding protein_coding MGP_BALBcJ_T0066471.1 MGP_BALBcJ_G0028469.1 mouse_genomes_project 4 97742349 97987412 + MGP_BALBcJ_P0066471 Cachd1 protein_coding protein_coding MGP_BALBcJ_T0066472.1 MGP_BALBcJ_G0028469.1 mouse_genomes_project 4 97959775 97968260 + Cachd1 protein_coding processed_transcript MGP_BALBcJ_T0066473.1 MGP_BALBcJ_G0028469.1 mouse_genomes_project 4 97959874 97968430 + Cachd1 protein_coding processed_transcript MGP_BALBcJ_T0066486.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98368434 98434130 + MGP_BALBcJ_P0066486 Ak4 protein_coding protein_coding MGP_BALBcJ_T0066487.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98368446 98434130 + MGP_BALBcJ_P0066487 Ak4 protein_coding protein_coding MGP_BALBcJ_T0066488.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98368476 98434130 + MGP_BALBcJ_P0066488 Ak4 protein_coding protein_coding MGP_BALBcJ_T0066489.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98368863 98426955 + MGP_BALBcJ_P0066489 Ak4 protein_coding protein_coding MGP_BALBcJ_T0066490.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98368890 98429374 + MGP_BALBcJ_P0066490 Ak4 protein_coding protein_coding MGP_BALBcJ_T0066491.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98369654 98430831 + Ak4 protein_coding processed_transcript MGP_BALBcJ_T0066492.1 MGP_BALBcJ_G0028473.1 mouse_genomes_project 4 98413596 98430930 + MGP_BALBcJ_P0066492 Ak4 protein_coding protein_coding MGP_BALBcJ_T0069344.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147608955 147662402 - MGP_BALBcJ_P0069344 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069345.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147608955 147662392 - MGP_BALBcJ_P0069345 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069346.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147608957 147665279 - MGP_BALBcJ_P0069346 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069347.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147608957 147637430 - MGP_BALBcJ_P0069347 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069348.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147608958 147639280 - MGP_BALBcJ_P0069348 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069349.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147609604 147662299 - MGP_BALBcJ_P0069349 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069350.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147610427 147623996 - MGP_BALBcJ_P0069350 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069351.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147619516 147638422 - MGP_BALBcJ_P0069351 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069352.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147619595 147638861 - MGP_BALBcJ_P0069352 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069353.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147619757 147662298 - MGP_BALBcJ_P0069353 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069354.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147619922 147662246 - MGP_BALBcJ_P0069354 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069355.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147623864 147666264 - MGP_BALBcJ_P0069355 Pik3cd protein_coding protein_coding MGP_BALBcJ_T0069356.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147636674 147639329 - Pik3cd protein_coding processed_transcript MGP_BALBcJ_T0069357.1 MGP_BALBcJ_G0029125.1 mouse_genomes_project 4 147637000 147665279 - Pik3cd protein_coding processed_transcript MGP_BALBcJ_T0068873.1 MGP_BALBcJ_G0029000.1 mouse_genomes_project 4 136743214 136773201 + MGP_BALBcJ_P0068873 Emc1 protein_coding protein_coding MGP_BALBcJ_T0068874.1 MGP_BALBcJ_G0029000.1 mouse_genomes_project 4 136743220 136773201 + MGP_BALBcJ_P0068874 Emc1 protein_coding protein_coding MGP_BALBcJ_T0068875.1 MGP_BALBcJ_G0029000.1 mouse_genomes_project 4 136743220 136773201 + MGP_BALBcJ_P0068875 Emc1 protein_coding protein_coding MGP_BALBcJ_T0068876.1 MGP_BALBcJ_G0029000.1 mouse_genomes_project 4 136743236 136745640 + Emc1 protein_coding processed_transcript MGP_BALBcJ_T0068878.1 MGP_BALBcJ_G0029000.1 mouse_genomes_project 4 136750524 136770754 + Emc1 protein_coding processed_transcript MGP_BALBcJ_T0098599.1 MGP_BALBcJ_G0036653.1 mouse_genomes_project 4 55764814 55764899 + Gm26400 rRNA rRNA MGP_BALBcJ_T0004559.1 MGP_BALBcJ_G0003959.1 mouse_genomes_project 4 139484905 139496211 + 4930455G09Rik antisense antisense MGP_BALBcJ_T0014701.1 MGP_BALBcJ_G0012798.1 mouse_genomes_project 4 112725534 112726597 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102506.1 MGP_BALBcJ_G0040322.1 mouse_genomes_project 4 40506089 40506391 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014371.1 MGP_BALBcJ_G0012468.1 mouse_genomes_project 4 1505031 1505399 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068834.1 MGP_BALBcJ_G0028991.1 mouse_genomes_project 4 136356652 136357901 + MGP_BALBcJ_P0068834 Rnf186 protein_coding protein_coding MGP_BALBcJ_T0018065.1 MGP_BALBcJ_G0015518.1 mouse_genomes_project 4 129516632 129522285 - Snhg3 processed_transcript processed_transcript MGP_BALBcJ_T0018066.1 MGP_BALBcJ_G0015518.1 mouse_genomes_project 4 129520551 129522308 - Snhg3 processed_transcript processed_transcript MGP_BALBcJ_T0018067.1 MGP_BALBcJ_G0015518.1 mouse_genomes_project 4 129520552 129521555 - Snhg3 processed_transcript processed_transcript MGP_BALBcJ_T0018068.1 MGP_BALBcJ_G0015518.1 mouse_genomes_project 4 129520552 129522255 - Snhg3 processed_transcript processed_transcript MGP_BALBcJ_T0018069.1 MGP_BALBcJ_G0015518.1 mouse_genomes_project 4 129520622 129521958 - Snhg3 processed_transcript processed_transcript MGP_BALBcJ_T0066233.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84780061 84812835 - MGP_BALBcJ_P0066233 Mllt3 protein_coding protein_coding MGP_BALBcJ_T0066234.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84780098 84812806 - MGP_BALBcJ_P0066234 Mllt3 protein_coding protein_coding MGP_BALBcJ_T0066235.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84780160 85040105 - MGP_BALBcJ_P0066235 Mllt3 protein_coding protein_coding MGP_BALBcJ_T0066236.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84798029 85040291 - Mllt3 protein_coding processed_transcript MGP_BALBcJ_T0066237.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84841419 84883433 - Mllt3 protein_coding processed_transcript MGP_BALBcJ_T0066238.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84846057 85038656 - Mllt3 protein_coding retained_intron MGP_BALBcJ_T0066239.1 MGP_BALBcJ_G0028399.1 mouse_genomes_project 4 84849722 85038656 - MGP_BALBcJ_P0066239 Mllt3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069752.1 MGP_BALBcJ_G0029195.1 mouse_genomes_project 4 153558148 153559450 + Tmem52 protein_coding retained_intron MGP_BALBcJ_T0069753.1 MGP_BALBcJ_G0029195.1 mouse_genomes_project 4 153558148 153559893 + MGP_BALBcJ_P0069753 Tmem52 protein_coding protein_coding MGP_BALBcJ_T0069754.1 MGP_BALBcJ_G0029195.1 mouse_genomes_project 4 153558148 153559893 + MGP_BALBcJ_P0069754 Tmem52 protein_coding protein_coding MGP_BALBcJ_T0069755.1 MGP_BALBcJ_G0029195.1 mouse_genomes_project 4 153558165 153559892 + MGP_BALBcJ_P0069755 Tmem52 protein_coding protein_coding MGP_BALBcJ_T0069756.1 MGP_BALBcJ_G0029195.1 mouse_genomes_project 4 153558181 153559824 + Tmem52 protein_coding retained_intron MGP_BALBcJ_T0066712.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104318962 104364274 + MGP_BALBcJ_P0066712 Yipf1 protein_coding protein_coding MGP_BALBcJ_T0066713.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104318968 104326057 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066714.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104318983 104354971 + MGP_BALBcJ_P0066714 Yipf1 protein_coding protein_coding MGP_BALBcJ_T0066715.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104319011 104349205 + MGP_BALBcJ_P0066715 Yipf1 protein_coding protein_coding MGP_BALBcJ_T0066716.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104319036 104323634 + MGP_BALBcJ_P0066716 Yipf1 protein_coding protein_coding MGP_BALBcJ_T0066717.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104319730 104320439 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066718.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104320364 104348816 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066719.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104323588 104364275 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066720.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104329265 104340640 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066721.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104347248 104356088 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066722.1 MGP_BALBcJ_G0028520.1 mouse_genomes_project 4 104348691 104364274 + Yipf1 protein_coding processed_transcript MGP_BALBcJ_T0066032.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69058940 69143072 - MGP_BALBcJ_P0066032 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066033.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69059603 69143010 - MGP_BALBcJ_P0066033 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066034.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69059605 69143007 - MGP_BALBcJ_P0066034 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066035.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69059608 69141245 - Tle1 protein_coding retained_intron MGP_BALBcJ_T0066036.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69060003 69142305 - MGP_BALBcJ_P0066036 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066037.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69060018 69062533 - Tle1 protein_coding processed_transcript MGP_BALBcJ_T0066038.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69080375 69083101 - MGP_BALBcJ_P0066038 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066039.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69099365 69143015 - MGP_BALBcJ_P0066039 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066040.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69100057 69141645 - MGP_BALBcJ_P0066040 Tle1 protein_coding protein_coding MGP_BALBcJ_T0066041.1 MGP_BALBcJ_G0028365.1 mouse_genomes_project 4 69108967 69143046 - Tle1 protein_coding processed_transcript MGP_BALBcJ_T0007958.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129474503 129476848 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0007959.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129474503 129476850 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0007960.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129474503 129475797 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0007961.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129474518 129476585 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0007962.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129475454 129476850 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0007963.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129475643 129476821 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0007964.1 MGP_BALBcJ_G0006496.1 mouse_genomes_project 4 129476012 129476850 + Snhg12 lincRNA lincRNA MGP_BALBcJ_T0065135.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38559321 38569215 + MGP_BALBcJ_P0065135 protein_coding protein_coding MGP_BALBcJ_T0065136.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38559579 38569215 + MGP_BALBcJ_P0065136 protein_coding protein_coding MGP_BALBcJ_T0065137.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38559623 38565854 + protein_coding retained_intron MGP_BALBcJ_T0065138.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38559637 38563735 + protein_coding retained_intron MGP_BALBcJ_T0065139.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38561434 38569215 + MGP_BALBcJ_P0065139 protein_coding protein_coding MGP_BALBcJ_T0065140.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38561520 38567789 + protein_coding retained_intron MGP_BALBcJ_T0065145.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38567527 38569215 + protein_coding retained_intron MGP_BALBcJ_T0065146.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38567662 38568197 + protein_coding retained_intron MGP_BALBcJ_T0065148.1 MGP_BALBcJ_G0028144.1 mouse_genomes_project 4 38568176 38569215 + protein_coding retained_intron MGP_BALBcJ_T0007886.1 MGP_BALBcJ_G0006446.1 mouse_genomes_project 4 100283313 100304894 + 4930456L15Rik lincRNA lincRNA MGP_BALBcJ_T0010629.1 MGP_BALBcJ_G0008754.1 mouse_genomes_project 4 138129742 138129838 + Gm23045 miRNA miRNA MGP_BALBcJ_T0004514.1 MGP_BALBcJ_G0003922.1 mouse_genomes_project 4 121695942 121826657 - Gm27247 antisense antisense MGP_BALBcJ_T0067202.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113841795 113853279 + MGP_BALBcJ_P0067202 Mutyh protein_coding protein_coding MGP_BALBcJ_T0067203.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113841797 113849498 + MGP_BALBcJ_P0067203 Mutyh protein_coding protein_coding MGP_BALBcJ_T0067204.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113841810 113853286 + Mutyh protein_coding retained_intron MGP_BALBcJ_T0067205.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113841820 113852616 + Mutyh protein_coding retained_intron MGP_BALBcJ_T0067206.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113848222 113853231 + MGP_BALBcJ_P0067206 Mutyh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067207.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113848280 113850884 + Mutyh protein_coding retained_intron MGP_BALBcJ_T0067208.1 MGP_BALBcJ_G0028618.1 mouse_genomes_project 4 113851542 113853288 + Mutyh protein_coding retained_intron MGP_BALBcJ_T0065742.1 MGP_BALBcJ_G0028281.1 mouse_genomes_project 4 50533079 50581850 + MGP_BALBcJ_P0065742 Fktn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065743.1 MGP_BALBcJ_G0028281.1 mouse_genomes_project 4 50533444 50584848 + MGP_BALBcJ_P0065743 Fktn protein_coding protein_coding MGP_BALBcJ_T0007987.1 MGP_BALBcJ_G0006515.1 mouse_genomes_project 4 137868710 137892314 + Gm13026 lincRNA lincRNA MGP_BALBcJ_T0004496.1 MGP_BALBcJ_G0003908.1 mouse_genomes_project 4 114333272 114335181 + Gm12843 antisense antisense MGP_BALBcJ_T0004497.1 MGP_BALBcJ_G0003908.1 mouse_genomes_project 4 114333599 114334829 + Gm12843 antisense antisense MGP_BALBcJ_T0067568.1 MGP_BALBcJ_G0028705.1 mouse_genomes_project 4 118239967 118279833 - MGP_BALBcJ_P0067568 Rlf protein_coding protein_coding MGP_BALBcJ_T0067569.1 MGP_BALBcJ_G0028705.1 mouse_genomes_project 4 118240478 118307014 - MGP_BALBcJ_P0067569 Rlf protein_coding protein_coding MGP_BALBcJ_T0067570.1 MGP_BALBcJ_G0028705.1 mouse_genomes_project 4 118265023 118279833 - MGP_BALBcJ_P0067570 Rlf protein_coding protein_coding MGP_BALBcJ_T0010625.1 MGP_BALBcJ_G0008750.1 mouse_genomes_project 4 135688847 135688916 - Mir7019 miRNA miRNA MGP_BALBcJ_T0067283.1 MGP_BALBcJ_G0028633.1 mouse_genomes_project 4 114595289 114720692 + MGP_BALBcJ_P0067283 Eri3 protein_coding protein_coding MGP_BALBcJ_T0067284.1 MGP_BALBcJ_G0028633.1 mouse_genomes_project 4 114597533 114628322 + MGP_BALBcJ_P0067284 Eri3 protein_coding protein_coding MGP_BALBcJ_T0067285.1 MGP_BALBcJ_G0028633.1 mouse_genomes_project 4 114609964 114720692 + Eri3 protein_coding processed_transcript MGP_BALBcJ_T0067286.1 MGP_BALBcJ_G0028633.1 mouse_genomes_project 4 114628291 114661905 + MGP_BALBcJ_P0067286 Eri3 protein_coding protein_coding MGP_BALBcJ_T0067287.1 MGP_BALBcJ_G0028633.1 mouse_genomes_project 4 114634682 114661564 + Eri3 protein_coding processed_transcript MGP_BALBcJ_T0067288.1 MGP_BALBcJ_G0028633.1 mouse_genomes_project 4 114684169 114720676 + Eri3 protein_coding processed_transcript MGP_BALBcJ_T0007814.1 MGP_BALBcJ_G0006387.1 mouse_genomes_project 4 44787949 44789755 + Gm12434 lincRNA lincRNA MGP_BALBcJ_T0069779.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153718268 153723600 + Cdk11b protein_coding processed_transcript MGP_BALBcJ_T0069780.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153718283 153742976 + MGP_BALBcJ_P0069780 Cdk11b protein_coding protein_coding MGP_BALBcJ_T0069781.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153718294 153719111 + Cdk11b protein_coding processed_transcript MGP_BALBcJ_T0069782.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153718297 153742976 + MGP_BALBcJ_P0069782 Cdk11b protein_coding protein_coding MGP_BALBcJ_T0069783.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153718324 153742976 + MGP_BALBcJ_P0069783 Cdk11b protein_coding protein_coding MGP_BALBcJ_T0069784.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153727429 153733085 + Cdk11b protein_coding processed_transcript MGP_BALBcJ_T0069785.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153740240 153741443 + Cdk11b protein_coding processed_transcript MGP_BALBcJ_T0069786.1 MGP_BALBcJ_G0029200.1 mouse_genomes_project 4 153740405 153741330 + Cdk11b protein_coding processed_transcript MGP_BALBcJ_T0065226.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39732522 39740669 - Fancg protein_coding retained_intron MGP_BALBcJ_T0065227.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39732522 39740536 - MGP_BALBcJ_P0065227 Fancg protein_coding protein_coding MGP_BALBcJ_T0065228.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39733101 39734112 - Fancg protein_coding retained_intron MGP_BALBcJ_T0065229.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39733190 39736706 - Fancg protein_coding processed_transcript MGP_BALBcJ_T0065230.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39733439 39736751 - Fancg protein_coding processed_transcript MGP_BALBcJ_T0065231.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39734092 39737019 - Fancg protein_coding processed_transcript MGP_BALBcJ_T0065232.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39735468 39739338 - Fancg protein_coding processed_transcript MGP_BALBcJ_T0065233.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39739251 39740351 - Fancg protein_coding retained_intron MGP_BALBcJ_T0065234.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39739342 39740403 - Fancg protein_coding retained_intron MGP_BALBcJ_T0065235.1 MGP_BALBcJ_G0028173.1 mouse_genomes_project 4 39740223 39740687 - Fancg protein_coding processed_transcript MGP_BALBcJ_T0010551.1 MGP_BALBcJ_G0008676.1 mouse_genomes_project 4 616 718 + Mir3471-2 miRNA miRNA MGP_BALBcJ_T0014490.1 MGP_BALBcJ_G0012587.1 mouse_genomes_project 4 34630345 34640188 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068472.1 MGP_BALBcJ_G0028903.1 mouse_genomes_project 4 131488519 131491513 - MGP_BALBcJ_P0068472 Grrp1 protein_coding protein_coding MGP_BALBcJ_T0068473.1 MGP_BALBcJ_G0028903.1 mouse_genomes_project 4 131489115 131490429 - Grrp1 protein_coding processed_transcript MGP_BALBcJ_T0068364.1 MGP_BALBcJ_G0028882.1 mouse_genomes_project 4 130797890 130805566 + MGP_BALBcJ_P0068364 Gpn2 protein_coding protein_coding MGP_BALBcJ_T0068365.1 MGP_BALBcJ_G0028882.1 mouse_genomes_project 4 130797947 130805316 + MGP_BALBcJ_P0068365 Gpn2 protein_coding protein_coding MGP_BALBcJ_T0068366.1 MGP_BALBcJ_G0028882.1 mouse_genomes_project 4 130797956 130799975 + Gpn2 protein_coding processed_transcript MGP_BALBcJ_T0101128.1 MGP_BALBcJ_G0039164.1 mouse_genomes_project 4 53558244 53558364 - Gm22952 snoRNA snoRNA MGP_BALBcJ_T0067148.1 MGP_BALBcJ_G0028608.1 mouse_genomes_project 4 113574163 113578467 - MGP_BALBcJ_P0067148 Tmem69 protein_coding protein_coding MGP_BALBcJ_T0067149.1 MGP_BALBcJ_G0028608.1 mouse_genomes_project 4 113574435 113575646 - Tmem69 protein_coding processed_transcript MGP_BALBcJ_T0067150.1 MGP_BALBcJ_G0028608.1 mouse_genomes_project 4 113575485 113578466 - MGP_BALBcJ_P0067150 Tmem69 protein_coding protein_coding MGP_BALBcJ_T0065886.1 MGP_BALBcJ_G0028319.1 mouse_genomes_project 4 56614776 56626218 - MGP_BALBcJ_P0065886 Inip protein_coding protein_coding MGP_BALBcJ_T0065887.1 MGP_BALBcJ_G0028319.1 mouse_genomes_project 4 56616500 56626178 - Inip protein_coding processed_transcript MGP_BALBcJ_T0065888.1 MGP_BALBcJ_G0028319.1 mouse_genomes_project 4 56623346 56626189 - Inip protein_coding processed_transcript MGP_BALBcJ_T0018074.1 MGP_BALBcJ_G0015523.1 mouse_genomes_project 4 152726424 152736072 - Gm13110 processed_transcript processed_transcript MGP_BALBcJ_T0010618.1 MGP_BALBcJ_G0008743.1 mouse_genomes_project 4 131818661 131818790 - Mir6403 miRNA miRNA MGP_BALBcJ_T0064552.1 MGP_BALBcJ_G0028003.1 mouse_genomes_project 4 2674535 2710268 + MGP_BALBcJ_P0064552 Ubxn2b protein_coding protein_coding MGP_BALBcJ_T0014425.1 MGP_BALBcJ_G0012522.1 mouse_genomes_project 4 15779300 15780148 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014782.1 MGP_BALBcJ_G0012879.1 mouse_genomes_project 4 138817243 138817447 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014507.1 MGP_BALBcJ_G0012604.1 mouse_genomes_project 4 41128596 41129012 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064841.1 MGP_BALBcJ_G0028072.1 mouse_genomes_project 4 21766524 21800415 - MGP_BALBcJ_P0064841 Ufl1 protein_coding protein_coding MGP_BALBcJ_T0064842.1 MGP_BALBcJ_G0028072.1 mouse_genomes_project 4 21766528 21800423 - Ufl1 protein_coding retained_intron MGP_BALBcJ_T0064843.1 MGP_BALBcJ_G0028072.1 mouse_genomes_project 4 21786898 21800411 - Ufl1 protein_coding processed_transcript MGP_BALBcJ_T0101178.1 MGP_BALBcJ_G0039214.1 mouse_genomes_project 4 129521396 129521601 - Snora73a snoRNA snoRNA MGP_BALBcJ_T0065355.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40262594 40294202 - MGP_BALBcJ_P0065355 Tln1 protein_coding protein_coding MGP_BALBcJ_T0065356.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40276849 40279087 - MGP_BALBcJ_P0065356 Tln1 protein_coding protein_coding MGP_BALBcJ_T0065357.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40278261 40282711 - MGP_BALBcJ_P0065357 Tln1 protein_coding protein_coding MGP_BALBcJ_T0065358.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40285238 40286238 - Tln1 protein_coding processed_transcript MGP_BALBcJ_T0065359.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40286300 40293937 - Tln1 protein_coding processed_transcript MGP_BALBcJ_T0065360.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40286892 40290244 - MGP_BALBcJ_P0065360 Tln1 protein_coding protein_coding MGP_BALBcJ_T0065361.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40287350 40287733 - Tln1 protein_coding processed_transcript MGP_BALBcJ_T0065362.1 MGP_BALBcJ_G0028188.1 mouse_genomes_project 4 40291126 40294470 - Tln1 protein_coding processed_transcript MGP_BALBcJ_T0067250.1 MGP_BALBcJ_G0028628.1 mouse_genomes_project 4 114194145 114196561 - MGP_BALBcJ_P0067250 Rps8 protein_coding protein_coding MGP_BALBcJ_T0067251.1 MGP_BALBcJ_G0028628.1 mouse_genomes_project 4 114194152 114194815 - Rps8 protein_coding retained_intron MGP_BALBcJ_T0067252.1 MGP_BALBcJ_G0028628.1 mouse_genomes_project 4 114194690 114195499 - Rps8 protein_coding retained_intron MGP_BALBcJ_T0067253.1 MGP_BALBcJ_G0028628.1 mouse_genomes_project 4 114194709 114196402 - Rps8 protein_coding retained_intron MGP_BALBcJ_T0067254.1 MGP_BALBcJ_G0028628.1 mouse_genomes_project 4 114194827 114196387 - Rps8 protein_coding retained_intron MGP_BALBcJ_T0067255.1 MGP_BALBcJ_G0028628.1 mouse_genomes_project 4 114195003 114196390 - Rps8 protein_coding retained_intron MGP_BALBcJ_T0010606.1 MGP_BALBcJ_G0008731.1 mouse_genomes_project 4 126548131 126548213 - Gm22994 miRNA miRNA MGP_BALBcJ_T0014628.1 MGP_BALBcJ_G0012725.1 mouse_genomes_project 4 88216669 88217275 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018045.1 MGP_BALBcJ_G0015508.1 mouse_genomes_project 4 113613583 113621720 - C530005A16Rik processed_transcript processed_transcript MGP_BALBcJ_T0069103.1 MGP_BALBcJ_G0029062.1 mouse_genomes_project 4 141522007 141554675 - MGP_BALBcJ_P0069103 protein_coding protein_coding MGP_BALBcJ_T0099897.1 MGP_BALBcJ_G0037933.1 mouse_genomes_project 4 153809258 153809360 - Gm22573 snRNA snRNA MGP_BALBcJ_T0064743.1 MGP_BALBcJ_G0028046.1 mouse_genomes_project 4 14356022 14623314 + MGP_BALBcJ_P0064743 Mmp16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064744.1 MGP_BALBcJ_G0028046.1 mouse_genomes_project 4 14356220 14506780 + MGP_BALBcJ_P0064744 Mmp16 protein_coding protein_coding MGP_BALBcJ_T0064745.1 MGP_BALBcJ_G0028046.1 mouse_genomes_project 4 14356587 14625000 + MGP_BALBcJ_P0064745 Mmp16 protein_coding protein_coding MGP_BALBcJ_T0064746.1 MGP_BALBcJ_G0028046.1 mouse_genomes_project 4 14356722 14560249 + Mmp16 protein_coding retained_intron MGP_BALBcJ_T0064747.1 MGP_BALBcJ_G0028046.1 mouse_genomes_project 4 14557324 14598879 + Mmp16 protein_coding retained_intron MGP_BALBcJ_T0068250.1 MGP_BALBcJ_G0028855.1 mouse_genomes_project 4 129713109 129716031 - MGP_BALBcJ_P0068250 Atpif1 protein_coding protein_coding MGP_BALBcJ_T0068251.1 MGP_BALBcJ_G0028855.1 mouse_genomes_project 4 129713109 129716202 - MGP_BALBcJ_P0068251 Atpif1 protein_coding protein_coding MGP_BALBcJ_T0068252.1 MGP_BALBcJ_G0028855.1 mouse_genomes_project 4 129715030 129716138 - Atpif1 protein_coding retained_intron MGP_BALBcJ_T0067746.1 MGP_BALBcJ_G0028755.1 mouse_genomes_project 4 123356995 123369071 - Sh3d21 protein_coding processed_transcript MGP_BALBcJ_T0067747.1 MGP_BALBcJ_G0028755.1 mouse_genomes_project 4 123356995 123369032 - MGP_BALBcJ_P0067747 Sh3d21 protein_coding protein_coding MGP_BALBcJ_T0067748.1 MGP_BALBcJ_G0028755.1 mouse_genomes_project 4 123356995 123369897 - MGP_BALBcJ_P0067748 Sh3d21 protein_coding protein_coding MGP_BALBcJ_T0067749.1 MGP_BALBcJ_G0028755.1 mouse_genomes_project 4 123357001 123369007 - Sh3d21 protein_coding processed_transcript MGP_BALBcJ_T0067750.1 MGP_BALBcJ_G0028755.1 mouse_genomes_project 4 123357950 123369062 - Sh3d21 protein_coding processed_transcript MGP_BALBcJ_T0014594.1 MGP_BALBcJ_G0012691.1 mouse_genomes_project 4 73711538 73711932 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010622.1 MGP_BALBcJ_G0008747.1 mouse_genomes_project 4 134510805 134510870 + Gm25399 miRNA miRNA MGP_BALBcJ_T0014406.1 MGP_BALBcJ_G0012503.1 mouse_genomes_project 4 12235260 12236105 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065557.1 MGP_BALBcJ_G0028229.1 mouse_genomes_project 4 42722820 42803020 + MGP_BALBcJ_P0065557 Tdrd7 protein_coding protein_coding MGP_BALBcJ_T0065558.1 MGP_BALBcJ_G0028229.1 mouse_genomes_project 4 42729731 42803020 + MGP_BALBcJ_P0065558 Tdrd7 protein_coding protein_coding MGP_BALBcJ_T0065559.1 MGP_BALBcJ_G0028229.1 mouse_genomes_project 4 42730332 42745131 + Tdrd7 protein_coding processed_transcript MGP_BALBcJ_T0065560.1 MGP_BALBcJ_G0028229.1 mouse_genomes_project 4 42747628 42763042 + Tdrd7 protein_coding processed_transcript MGP_BALBcJ_T0065561.1 MGP_BALBcJ_G0028229.1 mouse_genomes_project 4 42793895 42803020 + Tdrd7 protein_coding processed_transcript MGP_BALBcJ_T0101156.1 MGP_BALBcJ_G0039192.1 mouse_genomes_project 4 114194831 114194902 - Snord38a snoRNA snoRNA MGP_BALBcJ_T0010602.1 MGP_BALBcJ_G0008727.1 mouse_genomes_project 4 120767302 120767404 + Mir6398 miRNA miRNA MGP_BALBcJ_T0004415.1 MGP_BALBcJ_G0003848.1 mouse_genomes_project 4 25416932 25417712 - Gm11915 antisense antisense MGP_BALBcJ_T0068064.1 MGP_BALBcJ_G0028820.1 mouse_genomes_project 4 126990336 127029661 - MGP_BALBcJ_P0068064 Khdrbs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068065.1 MGP_BALBcJ_G0028820.1 mouse_genomes_project 4 126990995 127001003 - Khdrbs1 protein_coding retained_intron MGP_BALBcJ_T0068066.1 MGP_BALBcJ_G0028820.1 mouse_genomes_project 4 127001001 127029660 - MGP_BALBcJ_P0068066 Khdrbs1 protein_coding protein_coding MGP_BALBcJ_T0068067.1 MGP_BALBcJ_G0028820.1 mouse_genomes_project 4 127016547 127029667 - Khdrbs1 protein_coding retained_intron MGP_BALBcJ_T0069615.1 MGP_BALBcJ_G0029171.1 mouse_genomes_project 4 152096896 152112583 - MGP_BALBcJ_P0069615 Ccdc27 protein_coding protein_coding MGP_BALBcJ_T0007989.1 MGP_BALBcJ_G0006517.1 mouse_genomes_project 4 138327786 138333114 + 4930515B02Rik lincRNA lincRNA MGP_BALBcJ_T0007857.1 MGP_BALBcJ_G0006422.1 mouse_genomes_project 4 81061943 81065883 - Gm12414 lincRNA lincRNA MGP_BALBcJ_T0065324.1 MGP_BALBcJ_G0028183.1 mouse_genomes_project 4 40211879 40213526 - MGP_BALBcJ_P0065324 Sit1 protein_coding protein_coding MGP_BALBcJ_T0065325.1 MGP_BALBcJ_G0028183.1 mouse_genomes_project 4 40211985 40213014 - Sit1 protein_coding processed_transcript MGP_BALBcJ_T0018043.1 MGP_BALBcJ_G0015507.1 mouse_genomes_project 4 111893912 111906618 + Foxd2os processed_transcript processed_transcript MGP_BALBcJ_T0018044.1 MGP_BALBcJ_G0015507.1 mouse_genomes_project 4 111893912 111907526 + Foxd2os processed_transcript processed_transcript MGP_BALBcJ_T0069124.1 MGP_BALBcJ_G0029075.1 mouse_genomes_project 4 142194319 142205634 - MGP_BALBcJ_P0069124 Aadacl3 protein_coding protein_coding MGP_BALBcJ_T0066247.1 MGP_BALBcJ_G0028401.1 mouse_genomes_project 4 85392322 85438929 - MGP_BALBcJ_P0066247 Hacd4 protein_coding protein_coding MGP_BALBcJ_T0066250.1 MGP_BALBcJ_G0028401.1 mouse_genomes_project 4 85409598 85438942 - MGP_BALBcJ_P0066250 Hacd4 protein_coding protein_coding MGP_BALBcJ_T0066251.1 MGP_BALBcJ_G0028401.1 mouse_genomes_project 4 85412188 85438940 - MGP_BALBcJ_P0066251 Hacd4 protein_coding protein_coding MGP_BALBcJ_T0068934.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138433887 138453823 + MGP_BALBcJ_P0068934 Atp13a2 protein_coding protein_coding MGP_BALBcJ_T0068935.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138433914 138456064 + Atp13a2 protein_coding retained_intron MGP_BALBcJ_T0068936.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138434004 138445182 + Atp13a2 protein_coding retained_intron MGP_BALBcJ_T0068937.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138434081 138455812 + MGP_BALBcJ_P0068937 Atp13a2 protein_coding protein_coding MGP_BALBcJ_T0068938.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138442616 138450670 + Atp13a2 protein_coding processed_transcript MGP_BALBcJ_T0068939.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138443226 138449609 + Atp13a2 protein_coding processed_transcript MGP_BALBcJ_T0068940.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138449446 138450826 + Atp13a2 protein_coding processed_transcript MGP_BALBcJ_T0068941.1 MGP_BALBcJ_G0029017.1 mouse_genomes_project 4 138453152 138455457 + Atp13a2 protein_coding retained_intron MGP_BALBcJ_T0067487.1 MGP_BALBcJ_G0028683.1 mouse_genomes_project 4 116550285 116582097 - MGP_BALBcJ_P0067487 Rimkla protein_coding protein_coding MGP_BALBcJ_T0067488.1 MGP_BALBcJ_G0028683.1 mouse_genomes_project 4 116559526 116581978 - Rimkla protein_coding processed_transcript MGP_BALBcJ_T0068161.1 MGP_BALBcJ_G0028838.1 mouse_genomes_project 4 128096021 128106060 + MGP_BALBcJ_P0068161 Matn1 protein_coding protein_coding MGP_BALBcJ_T0068474.1 MGP_BALBcJ_G0028904.1 mouse_genomes_project 4 131512333 131524594 - MGP_BALBcJ_P0068474 Pdik1l protein_coding protein_coding MGP_BALBcJ_T0068475.1 MGP_BALBcJ_G0028904.1 mouse_genomes_project 4 131512333 131525250 - MGP_BALBcJ_P0068475 Pdik1l protein_coding protein_coding MGP_BALBcJ_T0068476.1 MGP_BALBcJ_G0028904.1 mouse_genomes_project 4 131512334 131524608 - MGP_BALBcJ_P0068476 Pdik1l protein_coding protein_coding MGP_BALBcJ_T0068477.1 MGP_BALBcJ_G0028904.1 mouse_genomes_project 4 131515865 131524580 - MGP_BALBcJ_P0068477 Pdik1l protein_coding protein_coding MGP_BALBcJ_T0068478.1 MGP_BALBcJ_G0028904.1 mouse_genomes_project 4 131516679 131524605 - MGP_BALBcJ_P0068478 Pdik1l protein_coding protein_coding MGP_BALBcJ_T0068479.1 MGP_BALBcJ_G0028904.1 mouse_genomes_project 4 131520923 131524580 - Pdik1l protein_coding processed_transcript MGP_BALBcJ_T0102531.1 MGP_BALBcJ_G0040347.1 mouse_genomes_project 4 112130914 112146995 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0068517.1 MGP_BALBcJ_G0028915.1 mouse_genomes_project 4 131812631 131956238 - MGP_BALBcJ_P0068517 Man1c1 protein_coding protein_coding MGP_BALBcJ_T0068518.1 MGP_BALBcJ_G0028915.1 mouse_genomes_project 4 131812631 131956238 - MGP_BALBcJ_P0068518 Man1c1 protein_coding protein_coding MGP_BALBcJ_T0068519.1 MGP_BALBcJ_G0028915.1 mouse_genomes_project 4 131818827 131955715 - Man1c1 protein_coding retained_intron MGP_BALBcJ_T0007817.1 MGP_BALBcJ_G0006390.1 mouse_genomes_project 4 50079815 50088690 - AI427809 lincRNA lincRNA MGP_BALBcJ_T0007818.1 MGP_BALBcJ_G0006390.1 mouse_genomes_project 4 50080352 50081007 - AI427809 lincRNA lincRNA MGP_BALBcJ_T0007819.1 MGP_BALBcJ_G0006390.1 mouse_genomes_project 4 50080914 50083950 - AI427809 lincRNA lincRNA MGP_BALBcJ_T0007820.1 MGP_BALBcJ_G0006390.1 mouse_genomes_project 4 50081191 50082291 - AI427809 lincRNA lincRNA MGP_BALBcJ_T0014773.1 MGP_BALBcJ_G0012870.1 mouse_genomes_project 4 133367838 133368298 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069127.1 MGP_BALBcJ_G0029078.1 mouse_genomes_project 4 142364717 142374399 + MGP_BALBcJ_P0069127 Gm13177 protein_coding protein_coding MGP_BALBcJ_T0007986.1 MGP_BALBcJ_G0006514.1 mouse_genomes_project 4 137855314 137862667 + Gm13021 lincRNA lincRNA MGP_BALBcJ_T0014484.1 MGP_BALBcJ_G0012581.1 mouse_genomes_project 4 31640610 31640952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098370.1 MGP_BALBcJ_G0036424.1 mouse_genomes_project 4 56383979 56384451 + pseudogene pseudogene MGP_BALBcJ_T0069853.1 MGP_BALBcJ_G0029215.1 mouse_genomes_project 4 153951324 153955405 - MGP_BALBcJ_P0069853 Tas1r3 protein_coding protein_coding MGP_BALBcJ_T0067127.1 MGP_BALBcJ_G0028604.1 mouse_genomes_project 4 113199955 113200874 + MGP_BALBcJ_P0067127 1700042G07Rik protein_coding protein_coding MGP_BALBcJ_T0069941.1 MGP_BALBcJ_G0029234.1 mouse_genomes_project 4 154318743 154330502 + MGP_BALBcJ_P0069941 Noc2l protein_coding protein_coding MGP_BALBcJ_T0069942.1 MGP_BALBcJ_G0029234.1 mouse_genomes_project 4 154318784 154330489 + MGP_BALBcJ_P0069942 Noc2l protein_coding protein_coding MGP_BALBcJ_T0064972.1 MGP_BALBcJ_G0028104.1 mouse_genomes_project 4 31640610 31640952 - MGP_BALBcJ_P0064972 protein_coding protein_coding MGP_BALBcJ_T0004407.1 MGP_BALBcJ_G0003842.1 mouse_genomes_project 4 8501958 8517371 + Gm11842 antisense antisense MGP_BALBcJ_T0010567.1 MGP_BALBcJ_G0008692.1 mouse_genomes_project 4 33391153 33391230 + Mir873b miRNA miRNA MGP_BALBcJ_T0014565.1 MGP_BALBcJ_G0012662.1 mouse_genomes_project 4 64103417 64103786 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010574.1 MGP_BALBcJ_G0008699.1 mouse_genomes_project 4 41613284 41613409 + Gm22639 miRNA miRNA MGP_BALBcJ_T0066555.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100111964 100113479 + Mier1 protein_coding processed_transcript MGP_BALBcJ_T0066556.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100111969 100164160 + MGP_BALBcJ_P0066556 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066557.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100112005 100128593 + Mier1 protein_coding processed_transcript MGP_BALBcJ_T0066558.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100112039 100140757 + Mier1 protein_coding processed_transcript MGP_BALBcJ_T0066559.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100112336 100115877 + MGP_BALBcJ_P0066559 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066560.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100112530 100116241 + Mier1 protein_coding processed_transcript MGP_BALBcJ_T0066561.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100112846 100124869 + MGP_BALBcJ_P0066561 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066562.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100113134 100164155 + MGP_BALBcJ_P0066562 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066563.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100113212 100164155 + MGP_BALBcJ_P0066563 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066564.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100114869 100116165 + Mier1 protein_coding processed_transcript MGP_BALBcJ_T0066565.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100116860 100164158 + MGP_BALBcJ_P0066565 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066566.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100116964 100140137 + Mier1 protein_coding retained_intron MGP_BALBcJ_T0066567.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100116984 100142010 + Mier1 protein_coding retained_intron MGP_BALBcJ_T0066568.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100140620 100161151 + MGP_BALBcJ_P0066568 Mier1 protein_coding protein_coding MGP_BALBcJ_T0066569.1 MGP_BALBcJ_G0028487.1 mouse_genomes_project 4 100156883 100161220 + Mier1 protein_coding processed_transcript MGP_BALBcJ_T0068353.1 MGP_BALBcJ_G0028878.1 mouse_genomes_project 4 130723073 130732868 + MGP_BALBcJ_P0068353 Kdf1 protein_coding protein_coding MGP_BALBcJ_T0068354.1 MGP_BALBcJ_G0028878.1 mouse_genomes_project 4 130723102 130739454 + MGP_BALBcJ_P0068354 Kdf1 protein_coding protein_coding MGP_BALBcJ_T0068355.1 MGP_BALBcJ_G0028878.1 mouse_genomes_project 4 130723133 130732591 + MGP_BALBcJ_P0068355 Kdf1 protein_coding protein_coding MGP_BALBcJ_T0068356.1 MGP_BALBcJ_G0028878.1 mouse_genomes_project 4 130723165 130739449 + MGP_BALBcJ_P0068356 Kdf1 protein_coding protein_coding MGP_BALBcJ_T0068357.1 MGP_BALBcJ_G0028878.1 mouse_genomes_project 4 130723193 130739451 + MGP_BALBcJ_P0068357 Kdf1 protein_coding protein_coding MGP_BALBcJ_T0014526.1 MGP_BALBcJ_G0012623.1 mouse_genomes_project 4 49032816 49033436 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068788.1 MGP_BALBcJ_G0028975.1 mouse_genomes_project 4 135621354 135674851 + MGP_BALBcJ_P0068788 Kif17 protein_coding protein_coding MGP_BALBcJ_T0068791.1 MGP_BALBcJ_G0028975.1 mouse_genomes_project 4 135634576 135674376 + MGP_BALBcJ_P0068791 Kif17 protein_coding protein_coding MGP_BALBcJ_T0068792.1 MGP_BALBcJ_G0028975.1 mouse_genomes_project 4 135634816 135674266 + MGP_BALBcJ_P0068792 Kif17 protein_coding protein_coding MGP_BALBcJ_T0068793.1 MGP_BALBcJ_G0028975.1 mouse_genomes_project 4 135634843 135659403 + Kif17 protein_coding retained_intron MGP_BALBcJ_T0069517.1 MGP_BALBcJ_G0029155.1 mouse_genomes_project 4 150181677 150185280 + MGP_BALBcJ_P0069517 Hes2 protein_coding protein_coding MGP_BALBcJ_T0069518.1 MGP_BALBcJ_G0029155.1 mouse_genomes_project 4 150182359 150183411 + Hes2 protein_coding processed_transcript MGP_BALBcJ_T0068758.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364051 135474676 + MGP_BALBcJ_P0068758 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068759.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364051 135496372 + MGP_BALBcJ_P0068759 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068760.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364051 135485505 + MGP_BALBcJ_P0068760 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068761.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364485 135576379 + MGP_BALBcJ_P0068761 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068762.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364485 135576379 + MGP_BALBcJ_P0068762 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068763.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364505 135365189 + Eif4g3 protein_coding processed_transcript MGP_BALBcJ_T0068764.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364513 135428742 + Eif4g3 protein_coding processed_transcript MGP_BALBcJ_T0068765.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364542 135575175 + MGP_BALBcJ_P0068765 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068766.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135364977 135576388 + MGP_BALBcJ_P0068766 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068767.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135375522 135472651 + MGP_BALBcJ_P0068767 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068768.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135520571 135577789 + MGP_BALBcJ_P0068768 Eif4g3 protein_coding protein_coding MGP_BALBcJ_T0068769.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135547123 135577789 + Eif4g3 protein_coding processed_transcript MGP_BALBcJ_T0068770.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135549779 135557694 + Eif4g3 protein_coding retained_intron MGP_BALBcJ_T0068771.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135553725 135557472 + Eif4g3 protein_coding processed_transcript MGP_BALBcJ_T0068772.1 MGP_BALBcJ_G0028972.1 mouse_genomes_project 4 135570741 135572472 + Eif4g3 protein_coding processed_transcript MGP_BALBcJ_T0065215.1 MGP_BALBcJ_G0028171.1 mouse_genomes_project 4 39695428 39698599 + 1700022I11Rik protein_coding processed_transcript MGP_BALBcJ_T0065216.1 MGP_BALBcJ_G0028171.1 mouse_genomes_project 4 39695455 39698565 + MGP_BALBcJ_P0065216 1700022I11Rik protein_coding protein_coding MGP_BALBcJ_T0065217.1 MGP_BALBcJ_G0028171.1 mouse_genomes_project 4 39697200 39698755 + MGP_BALBcJ_P0065217 1700022I11Rik protein_coding protein_coding MGP_BALBcJ_T0065218.1 MGP_BALBcJ_G0028171.1 mouse_genomes_project 4 39697212 39712598 + MGP_BALBcJ_P0065218 1700022I11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065219.1 MGP_BALBcJ_G0028171.1 mouse_genomes_project 4 39697212 39701593 + MGP_BALBcJ_P0065219 1700022I11Rik protein_coding protein_coding MGP_BALBcJ_T0099895.1 MGP_BALBcJ_G0037931.1 mouse_genomes_project 4 148306347 148306457 + Gm23209 snRNA snRNA MGP_BALBcJ_T0065553.1 MGP_BALBcJ_G0028228.1 mouse_genomes_project 4 42648547 42667808 + Ccdc180 protein_coding processed_transcript MGP_BALBcJ_T0065554.1 MGP_BALBcJ_G0028228.1 mouse_genomes_project 4 42648547 42708254 + MGP_BALBcJ_P0065554 Ccdc180 protein_coding protein_coding MGP_BALBcJ_T0065555.1 MGP_BALBcJ_G0028228.1 mouse_genomes_project 4 42649095 42708247 + MGP_BALBcJ_P0065555 Ccdc180 protein_coding protein_coding MGP_BALBcJ_T0065556.1 MGP_BALBcJ_G0028228.1 mouse_genomes_project 4 42673188 42680733 + MGP_BALBcJ_P0065556 Ccdc180 protein_coding protein_coding MGP_BALBcJ_T0068540.1 MGP_BALBcJ_G0028921.1 mouse_genomes_project 4 132192298 132198913 + MGP_BALBcJ_P0068540 Syf2 protein_coding protein_coding MGP_BALBcJ_T0068541.1 MGP_BALBcJ_G0028921.1 mouse_genomes_project 4 132192302 132196450 + Syf2 protein_coding retained_intron MGP_BALBcJ_T0068542.1 MGP_BALBcJ_G0028921.1 mouse_genomes_project 4 132192410 132197479 + Syf2 protein_coding retained_intron MGP_BALBcJ_T0064875.1 MGP_BALBcJ_G0028080.1 mouse_genomes_project 4 29270915 29289306 + Casp8ap2 protein_coding processed_transcript MGP_BALBcJ_T0064876.1 MGP_BALBcJ_G0028080.1 mouse_genomes_project 4 29270934 29297062 + Casp8ap2 protein_coding processed_transcript MGP_BALBcJ_T0064877.1 MGP_BALBcJ_G0028080.1 mouse_genomes_project 4 29270937 29311014 + MGP_BALBcJ_P0064877 Casp8ap2 protein_coding protein_coding MGP_BALBcJ_T0064878.1 MGP_BALBcJ_G0028080.1 mouse_genomes_project 4 29270942 29311014 + MGP_BALBcJ_P0064878 Casp8ap2 protein_coding protein_coding MGP_BALBcJ_T0064879.1 MGP_BALBcJ_G0028080.1 mouse_genomes_project 4 29281577 29311014 + MGP_BALBcJ_P0064879 Casp8ap2 protein_coding protein_coding MGP_BALBcJ_T0010571.1 MGP_BALBcJ_G0008696.1 mouse_genomes_project 4 40365394 40365527 + Gm25262 miRNA miRNA MGP_BALBcJ_T0067469.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116402396 116442826 - Ccdc30 protein_coding retained_intron MGP_BALBcJ_T0067470.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116403340 116497859 - MGP_BALBcJ_P0067470 Ccdc30 protein_coding unknown_likely_coding MGP_BALBcJ_T0067471.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116403347 116497866 - MGP_BALBcJ_P0067471 Ccdc30 protein_coding protein_coding MGP_BALBcJ_T0067472.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116421938 116436248 - Ccdc30 protein_coding retained_intron MGP_BALBcJ_T0067473.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116435385 116465601 - MGP_BALBcJ_P0067473 Ccdc30 protein_coding protein_coding MGP_BALBcJ_T0067474.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116435386 116442619 - Ccdc30 protein_coding processed_transcript MGP_BALBcJ_T0067475.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116436337 116475551 - MGP_BALBcJ_P0067475 Ccdc30 protein_coding protein_coding MGP_BALBcJ_T0067476.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116442730 116459286 - Ccdc30 protein_coding processed_transcript MGP_BALBcJ_T0067477.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116449403 116465675 - Ccdc30 protein_coding processed_transcript MGP_BALBcJ_T0067478.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116449405 116461252 - Ccdc30 protein_coding retained_intron MGP_BALBcJ_T0067479.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116449413 116465601 - MGP_BALBcJ_P0067479 Ccdc30 protein_coding protein_coding MGP_BALBcJ_T0067480.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116455524 116465587 - Ccdc30 protein_coding retained_intron MGP_BALBcJ_T0067481.1 MGP_BALBcJ_G0028680.1 mouse_genomes_project 4 116474593 116483525 - Ccdc30 protein_coding processed_transcript MGP_BALBcJ_T0011548.1 MGP_BALBcJ_G0009673.1 mouse_genomes_project 4 51498971 51499259 + Gm24628 misc_RNA misc_RNA MGP_BALBcJ_T0014563.1 MGP_BALBcJ_G0012660.1 mouse_genomes_project 4 63317244 63317582 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014698.1 MGP_BALBcJ_G0012795.1 mouse_genomes_project 4 112433694 112434019 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068068.1 MGP_BALBcJ_G0028821.1 mouse_genomes_project 4 127096484 127125477 + Ptp4a2 protein_coding processed_transcript MGP_BALBcJ_T0068069.1 MGP_BALBcJ_G0028821.1 mouse_genomes_project 4 127096487 127097791 + Ptp4a2 protein_coding retained_intron MGP_BALBcJ_T0068070.1 MGP_BALBcJ_G0028821.1 mouse_genomes_project 4 127105614 127125441 + Ptp4a2 protein_coding processed_transcript MGP_BALBcJ_T0068071.1 MGP_BALBcJ_G0028821.1 mouse_genomes_project 4 127105655 127125611 + Ptp4a2 protein_coding processed_transcript MGP_BALBcJ_T0068072.1 MGP_BALBcJ_G0028821.1 mouse_genomes_project 4 127125390 127132695 + Ptp4a2 protein_coding processed_transcript MGP_BALBcJ_T0068073.1 MGP_BALBcJ_G0028821.1 mouse_genomes_project 4 127125827 127134171 + MGP_BALBcJ_P0068073 Ptp4a2 protein_coding protein_coding MGP_BALBcJ_T0065413.1 MGP_BALBcJ_G0028199.1 mouse_genomes_project 4 40439119 40443723 - MGP_BALBcJ_P0065413 Olfr71 protein_coding protein_coding MGP_BALBcJ_T0065414.1 MGP_BALBcJ_G0028199.1 mouse_genomes_project 4 40439119 40440058 - MGP_BALBcJ_P0065414 Olfr71 protein_coding protein_coding MGP_BALBcJ_T0004554.1 MGP_BALBcJ_G0003955.1 mouse_genomes_project 4 139082981 139084558 + AI507597 antisense antisense MGP_BALBcJ_T0004555.1 MGP_BALBcJ_G0003955.1 mouse_genomes_project 4 139083310 139084558 + AI507597 antisense antisense MGP_BALBcJ_T0099841.1 MGP_BALBcJ_G0037877.1 mouse_genomes_project 4 66099009 66099116 + Gm24697 snRNA snRNA MGP_BALBcJ_T0067006.1 MGP_BALBcJ_G0028575.1 mouse_genomes_project 4 111986049 112029621 + MGP_BALBcJ_P0067006 Stil protein_coding protein_coding MGP_BALBcJ_T0067007.1 MGP_BALBcJ_G0028575.1 mouse_genomes_project 4 111986072 112025815 + MGP_BALBcJ_P0067007 Stil protein_coding protein_coding MGP_BALBcJ_T0067008.1 MGP_BALBcJ_G0028575.1 mouse_genomes_project 4 111986072 112029621 + MGP_BALBcJ_P0067008 Stil protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067009.1 MGP_BALBcJ_G0028575.1 mouse_genomes_project 4 111993643 112003151 + MGP_BALBcJ_P0067009 Stil protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067010.1 MGP_BALBcJ_G0028575.1 mouse_genomes_project 4 111997011 112008818 + Stil protein_coding processed_transcript MGP_BALBcJ_T0067011.1 MGP_BALBcJ_G0028575.1 mouse_genomes_project 4 112003085 112010381 + Stil protein_coding retained_intron MGP_BALBcJ_T0067406.1 MGP_BALBcJ_G0028660.1 mouse_genomes_project 4 115776122 115777070 + MGP_BALBcJ_P0067406 Olfr1340 protein_coding protein_coding MGP_BALBcJ_T0102552.1 MGP_BALBcJ_G0040368.1 mouse_genomes_project 4 141117615 141120953 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0064768.1 MGP_BALBcJ_G0028058.1 mouse_genomes_project 4 18191787 18200269 - Prdm13 protein_coding processed_transcript MGP_BALBcJ_T0064769.1 MGP_BALBcJ_G0028058.1 mouse_genomes_project 4 18191788 18200269 - MGP_BALBcJ_P0064769 Prdm13 protein_coding protein_coding MGP_BALBcJ_T0064770.1 MGP_BALBcJ_G0028058.1 mouse_genomes_project 4 18191788 18200089 - MGP_BALBcJ_P0064770 Prdm13 protein_coding protein_coding MGP_BALBcJ_T0064771.1 MGP_BALBcJ_G0028058.1 mouse_genomes_project 4 18193972 18200089 - Prdm13 protein_coding processed_transcript MGP_BALBcJ_T0064772.1 MGP_BALBcJ_G0028058.1 mouse_genomes_project 4 18194054 18200087 - Prdm13 protein_coding processed_transcript MGP_BALBcJ_T0064773.1 MGP_BALBcJ_G0028058.1 mouse_genomes_project 4 18196600 18200151 - Prdm13 protein_coding retained_intron MGP_BALBcJ_T0066772.1 MGP_BALBcJ_G0028528.1 mouse_genomes_project 4 104977399 105024249 + MGP_BALBcJ_P0066772 Slc1a7 protein_coding protein_coding MGP_BALBcJ_T0066773.1 MGP_BALBcJ_G0028528.1 mouse_genomes_project 4 105019992 105024243 + Slc1a7 protein_coding retained_intron MGP_BALBcJ_T0014499.1 MGP_BALBcJ_G0012596.1 mouse_genomes_project 4 36860832 36861250 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064906.1 MGP_BALBcJ_G0028087.1 mouse_genomes_project 4 29727987 29760809 + MGP_BALBcJ_P0064906 Gabrr2 protein_coding protein_coding MGP_BALBcJ_T0064907.1 MGP_BALBcJ_G0028087.1 mouse_genomes_project 4 29728100 29760809 + MGP_BALBcJ_P0064907 Gabrr2 protein_coding protein_coding MGP_BALBcJ_T0064908.1 MGP_BALBcJ_G0028087.1 mouse_genomes_project 4 29743764 29750533 + MGP_BALBcJ_P0064908 Gabrr2 protein_coding protein_coding MGP_BALBcJ_T0064909.1 MGP_BALBcJ_G0028087.1 mouse_genomes_project 4 29746473 29750789 + MGP_BALBcJ_P0064909 Gabrr2 protein_coding protein_coding MGP_BALBcJ_T0014765.1 MGP_BALBcJ_G0012862.1 mouse_genomes_project 4 132556192 132556502 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065871.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56307507 56383981 - MGP_BALBcJ_P0065871 Ptbp3 protein_coding protein_coding MGP_BALBcJ_T0065872.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56310895 56384110 - MGP_BALBcJ_P0065872 Ptbp3 protein_coding protein_coding MGP_BALBcJ_T0065873.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56312571 56320985 - Ptbp3 protein_coding retained_intron MGP_BALBcJ_T0065874.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56316663 56329036 - MGP_BALBcJ_P0065874 Ptbp3 protein_coding protein_coding MGP_BALBcJ_T0065875.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56316668 56384078 - MGP_BALBcJ_P0065875 Ptbp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065876.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56328939 56384083 - MGP_BALBcJ_P0065876 Ptbp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065877.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56328989 56384091 - MGP_BALBcJ_P0065877 Ptbp3 protein_coding protein_coding MGP_BALBcJ_T0065878.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56336871 56349743 - Ptbp3 protein_coding retained_intron MGP_BALBcJ_T0065879.1 MGP_BALBcJ_G0028316.1 mouse_genomes_project 4 56352307 56383563 - MGP_BALBcJ_P0065879 Ptbp3 protein_coding protein_coding MGP_BALBcJ_T0007968.1 MGP_BALBcJ_G0006500.1 mouse_genomes_project 4 132382593 132384820 - Gm16225 lincRNA lincRNA MGP_BALBcJ_T0068631.1 MGP_BALBcJ_G0028941.1 mouse_genomes_project 4 133292951 133313036 - MGP_BALBcJ_P0068631 Tceb3 protein_coding protein_coding MGP_BALBcJ_T0007956.1 MGP_BALBcJ_G0006494.1 mouse_genomes_project 4 129430886 129434553 + Gm28874 lincRNA lincRNA MGP_BALBcJ_T0067124.1 MGP_BALBcJ_G0028603.1 mouse_genomes_project 4 113188491 113193137 - MGP_BALBcJ_P0067124 Tspan1 protein_coding unknown_likely_coding MGP_BALBcJ_T0067125.1 MGP_BALBcJ_G0028603.1 mouse_genomes_project 4 113188811 113193105 - MGP_BALBcJ_P0067125 Tspan1 protein_coding protein_coding MGP_BALBcJ_T0067126.1 MGP_BALBcJ_G0028603.1 mouse_genomes_project 4 113188835 113190337 - Tspan1 protein_coding retained_intron MGP_BALBcJ_T0066475.1 MGP_BALBcJ_G0028471.1 mouse_genomes_project 4 98020551 98098725 + MGP_BALBcJ_P0066475 Raver2 protein_coding protein_coding MGP_BALBcJ_T0066476.1 MGP_BALBcJ_G0028471.1 mouse_genomes_project 4 98020551 98081713 + MGP_BALBcJ_P0066476 Raver2 protein_coding protein_coding MGP_BALBcJ_T0066477.1 MGP_BALBcJ_G0028471.1 mouse_genomes_project 4 98021047 98054531 + Raver2 protein_coding processed_transcript MGP_BALBcJ_T0101150.1 MGP_BALBcJ_G0039186.1 mouse_genomes_project 4 99735458 99735586 + Gm24869 snoRNA snoRNA MGP_BALBcJ_T0014469.1 MGP_BALBcJ_G0012566.1 mouse_genomes_project 4 28784686 28785123 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068890.1 MGP_BALBcJ_G0029002.1 mouse_genomes_project 4 136973641 137019674 + MGP_BALBcJ_P0068890 Iffo2 protein_coding protein_coding MGP_BALBcJ_T0065899.1 MGP_BALBcJ_G0028327.1 mouse_genomes_project 4 59117646 59136448 - MGP_BALBcJ_P0065899 Zfp37 protein_coding unknown_likely_coding MGP_BALBcJ_T0065900.1 MGP_BALBcJ_G0028327.1 mouse_genomes_project 4 59117646 59136448 - MGP_BALBcJ_P0065900 Zfp37 protein_coding unknown_likely_coding MGP_BALBcJ_T0065901.1 MGP_BALBcJ_G0028327.1 mouse_genomes_project 4 59117650 59136533 - MGP_BALBcJ_P0065901 Zfp37 protein_coding protein_coding MGP_BALBcJ_T0065902.1 MGP_BALBcJ_G0028327.1 mouse_genomes_project 4 59120648 59136289 - Zfp37 protein_coding processed_transcript MGP_BALBcJ_T0065903.1 MGP_BALBcJ_G0028327.1 mouse_genomes_project 4 59120699 59135976 - Zfp37 protein_coding processed_transcript MGP_BALBcJ_T0066478.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98098721 98212261 - MGP_BALBcJ_P0066478 Jak1 protein_coding protein_coding MGP_BALBcJ_T0066479.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98100603 98101474 - Jak1 protein_coding processed_transcript MGP_BALBcJ_T0066480.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98125980 98131807 - Jak1 protein_coding processed_transcript MGP_BALBcJ_T0066481.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98127407 98131832 - Jak1 protein_coding processed_transcript MGP_BALBcJ_T0066482.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98128260 98212260 - Jak1 protein_coding processed_transcript MGP_BALBcJ_T0066483.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98128300 98212202 - Jak1 protein_coding processed_transcript MGP_BALBcJ_T0066484.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98138007 98212252 - MGP_BALBcJ_P0066484 Jak1 protein_coding protein_coding MGP_BALBcJ_T0066485.1 MGP_BALBcJ_G0028472.1 mouse_genomes_project 4 98144219 98212205 - Jak1 protein_coding processed_transcript MGP_BALBcJ_T0102537.1 MGP_BALBcJ_G0040353.1 mouse_genomes_project 4 115728675 115729589 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0069051.1 MGP_BALBcJ_G0029043.1 mouse_genomes_project 4 139289607 139293885 - Cela2a protein_coding retained_intron MGP_BALBcJ_T0069052.1 MGP_BALBcJ_G0029043.1 mouse_genomes_project 4 139289607 139300039 - MGP_BALBcJ_P0069052 Cela2a protein_coding protein_coding MGP_BALBcJ_T0069054.1 MGP_BALBcJ_G0029043.1 mouse_genomes_project 4 139298833 139299880 - Cela2a protein_coding retained_intron MGP_BALBcJ_T0066367.1 MGP_BALBcJ_G0028444.1 mouse_genomes_project 4 93415985 93474194 - MGP_BALBcJ_P0066367 Cyp2j8 protein_coding protein_coding MGP_BALBcJ_T0004577.1 MGP_BALBcJ_G0003971.1 mouse_genomes_project 4 147300751 147318222 + Ube4bos1 antisense antisense MGP_BALBcJ_T0004578.1 MGP_BALBcJ_G0003971.1 mouse_genomes_project 4 147300780 147312306 + Ube4bos1 antisense antisense MGP_BALBcJ_T0014597.1 MGP_BALBcJ_G0012694.1 mouse_genomes_project 4 73846345 73846690 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069660.1 MGP_BALBcJ_G0029180.1 mouse_genomes_project 4 152920004 152935614 + MGP_BALBcJ_P0069660 Ttc34 protein_coding unknown_likely_coding MGP_BALBcJ_T0069661.1 MGP_BALBcJ_G0029180.1 mouse_genomes_project 4 152925918 152937301 + MGP_BALBcJ_P0069661 Ttc34 protein_coding protein_coding MGP_BALBcJ_T0069662.1 MGP_BALBcJ_G0029180.1 mouse_genomes_project 4 152930386 152931465 + Ttc34 protein_coding processed_transcript MGP_BALBcJ_T0068530.1 MGP_BALBcJ_G0028919.1 mouse_genomes_project 4 132158902 132176098 - MGP_BALBcJ_P0068530 Tmem50a protein_coding protein_coding MGP_BALBcJ_T0068531.1 MGP_BALBcJ_G0028919.1 mouse_genomes_project 4 132159444 132176089 - MGP_BALBcJ_P0068531 Tmem50a protein_coding protein_coding MGP_BALBcJ_T0065816.1 MGP_BALBcJ_G0028302.1 mouse_genomes_project 4 54804263 54829795 - Txndc8 protein_coding processed_transcript MGP_BALBcJ_T0065817.1 MGP_BALBcJ_G0028302.1 mouse_genomes_project 4 54804263 54829894 - MGP_BALBcJ_P0065817 Txndc8 protein_coding protein_coding MGP_BALBcJ_T0065818.1 MGP_BALBcJ_G0028302.1 mouse_genomes_project 4 54804265 54820545 - MGP_BALBcJ_P0065818 Txndc8 protein_coding protein_coding MGP_BALBcJ_T0014466.1 MGP_BALBcJ_G0012563.1 mouse_genomes_project 4 27357268 27357831 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004433.1 MGP_BALBcJ_G0003863.1 mouse_genomes_project 4 41761587 41765307 + 1700055D18Rik antisense antisense MGP_BALBcJ_T0004434.1 MGP_BALBcJ_G0003863.1 mouse_genomes_project 4 41762730 41764300 + 1700055D18Rik antisense antisense MGP_BALBcJ_T0007906.1 MGP_BALBcJ_G0006460.1 mouse_genomes_project 4 113202829 113204313 + Gm12951 lincRNA lincRNA MGP_BALBcJ_T0064759.1 MGP_BALBcJ_G0028054.1 mouse_genomes_project 4 16402754 16448567 - MGP_BALBcJ_P0064759 Atp6v0d2 protein_coding protein_coding MGP_BALBcJ_T0064760.1 MGP_BALBcJ_G0028054.1 mouse_genomes_project 4 16417184 16442907 - MGP_BALBcJ_P0064760 Atp6v0d2 protein_coding protein_coding MGP_BALBcJ_T0066614.1 MGP_BALBcJ_G0028504.1 mouse_genomes_project 4 103615067 103632734 + MGP_BALBcJ_P0066614 Ttc22 protein_coding protein_coding MGP_BALBcJ_T0066615.1 MGP_BALBcJ_G0028504.1 mouse_genomes_project 4 103628521 103630173 + Ttc22 protein_coding processed_transcript MGP_BALBcJ_T0068550.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132588767 132622431 - MGP_BALBcJ_P0068550 Srrm1 protein_coding protein_coding MGP_BALBcJ_T0068551.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132588774 132622354 - MGP_BALBcJ_P0068551 Srrm1 protein_coding protein_coding MGP_BALBcJ_T0068552.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132589377 132622354 - MGP_BALBcJ_P0068552 Srrm1 protein_coding protein_coding MGP_BALBcJ_T0068553.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132590316 132622246 - MGP_BALBcJ_P0068553 Srrm1 protein_coding protein_coding MGP_BALBcJ_T0068554.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132590573 132595496 - MGP_BALBcJ_P0068554 Srrm1 protein_coding protein_coding MGP_BALBcJ_T0068555.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132590759 132622244 - Srrm1 protein_coding retained_intron MGP_BALBcJ_T0068556.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132592051 132593133 - Srrm1 protein_coding retained_intron MGP_BALBcJ_T0068557.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132597441 132600506 - Srrm1 protein_coding retained_intron MGP_BALBcJ_T0068558.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132599750 132606803 - Srrm1 protein_coding retained_intron MGP_BALBcJ_T0068559.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132600430 132611192 - MGP_BALBcJ_P0068559 Srrm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068560.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132606998 132611248 - Srrm1 protein_coding retained_intron MGP_BALBcJ_T0068561.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132611140 132622252 - MGP_BALBcJ_P0068561 Srrm1 protein_coding protein_coding MGP_BALBcJ_T0068562.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132612366 132622261 - Srrm1 protein_coding retained_intron MGP_BALBcJ_T0068563.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132613257 132615934 - MGP_BALBcJ_P0068563 Srrm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068564.1 MGP_BALBcJ_G0028924.1 mouse_genomes_project 4 132614421 132622312 - Srrm1 protein_coding processed_transcript MGP_BALBcJ_T0068576.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132716815 132766186 - MGP_BALBcJ_P0068576 Nipal3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068577.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132717532 132766186 - MGP_BALBcJ_P0068577 Nipal3 protein_coding protein_coding MGP_BALBcJ_T0068578.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132720282 132766303 - MGP_BALBcJ_P0068578 Nipal3 protein_coding protein_coding MGP_BALBcJ_T0068579.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132723260 132738791 - MGP_BALBcJ_P0068579 Nipal3 protein_coding protein_coding MGP_BALBcJ_T0068580.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132723551 132726438 - Nipal3 protein_coding processed_transcript MGP_BALBcJ_T0068581.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132723641 132726710 - Nipal3 protein_coding processed_transcript MGP_BALBcJ_T0068582.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132747909 132766649 - MGP_BALBcJ_P0068582 Nipal3 protein_coding protein_coding MGP_BALBcJ_T0068583.1 MGP_BALBcJ_G0028927.1 mouse_genomes_project 4 132750826 132766718 - MGP_BALBcJ_P0068583 Nipal3 protein_coding protein_coding MGP_BALBcJ_T0068109.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127467274 127478297 - MGP_BALBcJ_P0068109 Tinagl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068110.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127468422 127478297 - MGP_BALBcJ_P0068110 Tinagl1 protein_coding protein_coding MGP_BALBcJ_T0068111.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127468424 127469432 - Tinagl1 protein_coding retained_intron MGP_BALBcJ_T0068112.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127468424 127478287 - MGP_BALBcJ_P0068112 Tinagl1 protein_coding protein_coding MGP_BALBcJ_T0068113.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127468539 127478617 - MGP_BALBcJ_P0068113 Tinagl1 protein_coding protein_coding MGP_BALBcJ_T0068114.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127469797 127472979 - Tinagl1 protein_coding retained_intron MGP_BALBcJ_T0068115.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127472607 127478186 - MGP_BALBcJ_P0068115 Tinagl1 protein_coding protein_coding MGP_BALBcJ_T0068116.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127474901 127478287 - Tinagl1 protein_coding processed_transcript MGP_BALBcJ_T0068117.1 MGP_BALBcJ_G0028827.1 mouse_genomes_project 4 127477204 127478315 - Tinagl1 protein_coding retained_intron MGP_BALBcJ_T0102536.1 MGP_BALBcJ_G0040352.1 mouse_genomes_project 4 114185602 114188983 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014785.1 MGP_BALBcJ_G0012882.1 mouse_genomes_project 4 140659722 140661265 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065585.1 MGP_BALBcJ_G0028234.1 mouse_genomes_project 4 43112563 43115350 + MGP_BALBcJ_P0065585 Foxe1 protein_coding protein_coding MGP_BALBcJ_T0014502.1 MGP_BALBcJ_G0012599.1 mouse_genomes_project 4 37908463 37908797 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008008.1 MGP_BALBcJ_G0006536.1 mouse_genomes_project 4 152919023 152920543 + lincRNA lincRNA MGP_BALBcJ_T0014562.1 MGP_BALBcJ_G0012659.1 mouse_genomes_project 4 61971198 61971556 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001417.1 MGP_BALBcJ_G0001339.1 mouse_genomes_project 4 121447899 121449186 - TEC TEC MGP_BALBcJ_T0004499.1 MGP_BALBcJ_G0003910.1 mouse_genomes_project 4 114939667 114942042 + Gm12841 antisense antisense MGP_BALBcJ_T0101124.1 MGP_BALBcJ_G0039160.1 mouse_genomes_project 4 50826061 50826192 + Gm24177 snoRNA snoRNA MGP_BALBcJ_T0067056.1 MGP_BALBcJ_G0028591.1 mouse_genomes_project 4 112845811 112853902 + MGP_BALBcJ_P0067056 Mob3c protein_coding protein_coding MGP_BALBcJ_T0067057.1 MGP_BALBcJ_G0028591.1 mouse_genomes_project 4 112845816 112849427 + Mob3c protein_coding retained_intron MGP_BALBcJ_T0067058.1 MGP_BALBcJ_G0028591.1 mouse_genomes_project 4 112846377 112849257 + MGP_BALBcJ_P0067058 Mob3c protein_coding protein_coding MGP_BALBcJ_T0014729.1 MGP_BALBcJ_G0012826.1 mouse_genomes_project 4 118465382 118465707 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066348.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92930842 92978665 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066349.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92930848 92958683 + MGP_BALBcJ_P0066349 Hook1 protein_coding protein_coding MGP_BALBcJ_T0066350.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92930973 92988576 + MGP_BALBcJ_P0066350 Hook1 protein_coding protein_coding MGP_BALBcJ_T0066351.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92940141 92985527 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066352.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92961925 92972710 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066353.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92963099 92973103 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066354.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92967523 92985669 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066355.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92976477 92982812 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066356.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92979368 92980862 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066357.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92983195 92985416 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0066358.1 MGP_BALBcJ_G0028439.1 mouse_genomes_project 4 92984425 92988576 + Hook1 protein_coding processed_transcript MGP_BALBcJ_T0065643.1 MGP_BALBcJ_G0028250.1 mouse_genomes_project 4 44918468 44977389 + MGP_BALBcJ_P0065643 Stx17 protein_coding protein_coding MGP_BALBcJ_T0065644.1 MGP_BALBcJ_G0028250.1 mouse_genomes_project 4 44918476 44955497 + MGP_BALBcJ_P0065644 Stx17 protein_coding protein_coding MGP_BALBcJ_T0065645.1 MGP_BALBcJ_G0028250.1 mouse_genomes_project 4 44918479 44977985 + MGP_BALBcJ_P0065645 Stx17 protein_coding protein_coding MGP_BALBcJ_T0065646.1 MGP_BALBcJ_G0028250.1 mouse_genomes_project 4 44918488 44973709 + MGP_BALBcJ_P0065646 Stx17 protein_coding protein_coding MGP_BALBcJ_T0069807.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153830985 153852095 - MGP_BALBcJ_P0069807 Atad3a protein_coding protein_coding MGP_BALBcJ_T0069808.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153831178 153836695 - Atad3a protein_coding retained_intron MGP_BALBcJ_T0069809.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153836417 153839944 - Atad3a protein_coding retained_intron MGP_BALBcJ_T0069810.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153837551 153839812 - Atad3a protein_coding retained_intron MGP_BALBcJ_T0069811.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153840836 153846584 - MGP_BALBcJ_P0069811 Atad3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069812.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153841138 153845275 - MGP_BALBcJ_P0069812 Atad3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069813.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153842118 153851930 - MGP_BALBcJ_P0069813 Atad3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069814.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153844123 153852070 - MGP_BALBcJ_P0069814 Atad3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069815.1 MGP_BALBcJ_G0029206.1 mouse_genomes_project 4 153846345 153852089 - Atad3a protein_coding retained_intron MGP_BALBcJ_T0065166.1 MGP_BALBcJ_G0028151.1 mouse_genomes_project 4 38575623 38576593 - protein_coding processed_transcript MGP_BALBcJ_T0065168.1 MGP_BALBcJ_G0028151.1 mouse_genomes_project 4 38575653 38576720 - protein_coding processed_transcript MGP_BALBcJ_T0065169.1 MGP_BALBcJ_G0028151.1 mouse_genomes_project 4 38575668 38576698 - protein_coding processed_transcript MGP_BALBcJ_T0065174.1 MGP_BALBcJ_G0028151.1 mouse_genomes_project 4 38575690 38576747 - MGP_BALBcJ_P0065174 protein_coding protein_coding MGP_BALBcJ_T0065175.1 MGP_BALBcJ_G0028151.1 mouse_genomes_project 4 38575694 38576602 - protein_coding processed_transcript MGP_BALBcJ_T0065179.1 MGP_BALBcJ_G0028151.1 mouse_genomes_project 4 38575977 38576730 - protein_coding processed_transcript MGP_BALBcJ_T0014728.1 MGP_BALBcJ_G0012825.1 mouse_genomes_project 4 118464548 118464876 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004545.1 MGP_BALBcJ_G0003947.1 mouse_genomes_project 4 135768917 135771701 + AB041806 antisense antisense MGP_BALBcJ_T0007899.1 MGP_BALBcJ_G0006454.1 mouse_genomes_project 4 104782977 104790784 + 4933424M12Rik lincRNA lincRNA MGP_BALBcJ_T0007900.1 MGP_BALBcJ_G0006454.1 mouse_genomes_project 4 104788479 104790784 + 4933424M12Rik lincRNA lincRNA MGP_BALBcJ_T0065007.1 MGP_BALBcJ_G0028112.1 mouse_genomes_project 4 37005523 37015773 - MGP_BALBcJ_P0065007 Topors protein_coding protein_coding MGP_BALBcJ_T0065753.1 MGP_BALBcJ_G0028285.1 mouse_genomes_project 4 52140616 52183748 + MGP_BALBcJ_P0065753 Rad23b protein_coding protein_coding MGP_BALBcJ_T0065754.1 MGP_BALBcJ_G0028285.1 mouse_genomes_project 4 52140623 52158859 + Rad23b protein_coding processed_transcript MGP_BALBcJ_T0065755.1 MGP_BALBcJ_G0028285.1 mouse_genomes_project 4 52140625 52141758 + Rad23b protein_coding processed_transcript MGP_BALBcJ_T0065756.1 MGP_BALBcJ_G0028285.1 mouse_genomes_project 4 52140663 52171376 + Rad23b protein_coding processed_transcript MGP_BALBcJ_T0065589.1 MGP_BALBcJ_G0028236.1 mouse_genomes_project 4 43170977 43181096 - MGP_BALBcJ_P0065589 Hemgn protein_coding protein_coding MGP_BALBcJ_T0065590.1 MGP_BALBcJ_G0028236.1 mouse_genomes_project 4 43170977 43190813 - MGP_BALBcJ_P0065590 Hemgn protein_coding protein_coding MGP_BALBcJ_T0066813.1 MGP_BALBcJ_G0028536.1 mouse_genomes_project 4 105407790 105414356 - MGP_BALBcJ_P0066813 Gpx7 protein_coding protein_coding MGP_BALBcJ_T0066814.1 MGP_BALBcJ_G0028536.1 mouse_genomes_project 4 105408249 105414119 - MGP_BALBcJ_P0066814 Gpx7 protein_coding protein_coding MGP_BALBcJ_T0102542.1 MGP_BALBcJ_G0040358.1 mouse_genomes_project 4 119690238 119715036 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010633.1 MGP_BALBcJ_G0008758.1 mouse_genomes_project 4 146075984 146076045 - Mir7022 miRNA miRNA MGP_BALBcJ_T0014619.1 MGP_BALBcJ_G0012716.1 mouse_genomes_project 4 85050810 85051048 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010614.1 MGP_BALBcJ_G0008739.1 mouse_genomes_project 4 130564453 130564542 + Mir5122 miRNA miRNA MGP_BALBcJ_T0068247.1 MGP_BALBcJ_G0028853.1 mouse_genomes_project 4 129632488 129637684 - MGP_BALBcJ_P0068247 Med18 protein_coding protein_coding MGP_BALBcJ_T0068248.1 MGP_BALBcJ_G0028853.1 mouse_genomes_project 4 129633717 129637094 - MGP_BALBcJ_P0068248 Med18 protein_coding protein_coding MGP_BALBcJ_T0068991.1 MGP_BALBcJ_G0029027.1 mouse_genomes_project 4 138829162 138845407 + MGP_BALBcJ_P0068991 Fam131c protein_coding protein_coding MGP_BALBcJ_T0101171.1 MGP_BALBcJ_G0039207.1 mouse_genomes_project 4 128389417 128389551 + Gm25261 snoRNA snoRNA MGP_BALBcJ_T0066262.1 MGP_BALBcJ_G0028408.1 mouse_genomes_project 4 85639249 85640068 - MGP_BALBcJ_P0066262 Ifna13 protein_coding protein_coding MGP_BALBcJ_T0014440.1 MGP_BALBcJ_G0012537.1 mouse_genomes_project 4 20937913 20939629 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004494.1 MGP_BALBcJ_G0003906.1 mouse_genomes_project 4 113858749 113864452 + Gm12996 antisense antisense MGP_BALBcJ_T0066752.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893604 104903179 + MGP_BALBcJ_P0066752 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066753.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893616 104900775 + MGP_BALBcJ_P0066753 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066754.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893640 104901057 + 0610037L13Rik protein_coding processed_transcript MGP_BALBcJ_T0066755.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893654 104900913 + MGP_BALBcJ_P0066755 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066756.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893657 104899656 + MGP_BALBcJ_P0066756 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066757.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893660 104899141 + MGP_BALBcJ_P0066757 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066758.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893689 104900913 + MGP_BALBcJ_P0066758 0610037L13Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066759.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893690 104901597 + MGP_BALBcJ_P0066759 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066760.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893699 104895798 + MGP_BALBcJ_P0066760 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0066761.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104893910 104900959 + 0610037L13Rik protein_coding processed_transcript MGP_BALBcJ_T0066762.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104894018 104900852 + 0610037L13Rik protein_coding processed_transcript MGP_BALBcJ_T0066763.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104894031 104900913 + 0610037L13Rik protein_coding processed_transcript MGP_BALBcJ_T0066764.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104896968 104900848 + 0610037L13Rik protein_coding retained_intron MGP_BALBcJ_T0066765.1 MGP_BALBcJ_G0028526.1 mouse_genomes_project 4 104897164 104900913 + MGP_BALBcJ_P0066765 0610037L13Rik protein_coding protein_coding MGP_BALBcJ_T0068523.1 MGP_BALBcJ_G0028917.1 mouse_genomes_project 4 132056646 132065101 - Tmem57 protein_coding processed_transcript MGP_BALBcJ_T0068524.1 MGP_BALBcJ_G0028917.1 mouse_genomes_project 4 132056646 132107659 - MGP_BALBcJ_P0068524 Tmem57 protein_coding protein_coding MGP_BALBcJ_T0068525.1 MGP_BALBcJ_G0028917.1 mouse_genomes_project 4 132065081 132107463 - MGP_BALBcJ_P0068525 Tmem57 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068526.1 MGP_BALBcJ_G0028917.1 mouse_genomes_project 4 132082804 132107577 - MGP_BALBcJ_P0068526 Tmem57 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068527.1 MGP_BALBcJ_G0028917.1 mouse_genomes_project 4 132091611 132107631 - Tmem57 protein_coding retained_intron MGP_BALBcJ_T0007813.1 MGP_BALBcJ_G0006386.1 mouse_genomes_project 4 43787029 43789512 - Gm568 lincRNA lincRNA MGP_BALBcJ_T0065720.1 MGP_BALBcJ_G0028276.1 mouse_genomes_project 4 49803125 49814044 + MGP_BALBcJ_P0065720 Nipsnap3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065721.1 MGP_BALBcJ_G0028276.1 mouse_genomes_project 4 49803137 49814051 + MGP_BALBcJ_P0065721 Nipsnap3a protein_coding protein_coding MGP_BALBcJ_T0065722.1 MGP_BALBcJ_G0028276.1 mouse_genomes_project 4 49803271 49814405 + MGP_BALBcJ_P0065722 Nipsnap3a protein_coding protein_coding MGP_BALBcJ_T0065723.1 MGP_BALBcJ_G0028276.1 mouse_genomes_project 4 49813445 49814043 + Nipsnap3a protein_coding retained_intron MGP_BALBcJ_T0069638.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152353721 152357731 - Arhgef16 protein_coding retained_intron MGP_BALBcJ_T0069639.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152353721 152375106 - Arhgef16 protein_coding retained_intron MGP_BALBcJ_T0069640.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152353721 152375268 - MGP_BALBcJ_P0069640 Arhgef16 protein_coding protein_coding MGP_BALBcJ_T0069641.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152353985 152376875 - MGP_BALBcJ_P0069641 Arhgef16 protein_coding protein_coding MGP_BALBcJ_T0069642.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152357249 152362314 - Arhgef16 protein_coding processed_transcript MGP_BALBcJ_T0069643.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152362265 152375106 - MGP_BALBcJ_P0069643 Arhgef16 protein_coding protein_coding MGP_BALBcJ_T0069644.1 MGP_BALBcJ_G0029176.1 mouse_genomes_project 4 152366257 152376888 - MGP_BALBcJ_P0069644 Arhgef16 protein_coding protein_coding MGP_BALBcJ_T0010592.1 MGP_BALBcJ_G0008717.1 mouse_genomes_project 4 104442248 104442333 + Gm24804 miRNA miRNA MGP_BALBcJ_T0014544.1 MGP_BALBcJ_G0012641.1 mouse_genomes_project 4 52076465 52076708 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004502.1 MGP_BALBcJ_G0003913.1 mouse_genomes_project 4 116020657 116021303 - Gm12863 antisense antisense MGP_BALBcJ_T0065188.1 MGP_BALBcJ_G0028162.1 mouse_genomes_project 4 39322540 39323206 + MGP_BALBcJ_P0065188 protein_coding protein_coding MGP_BALBcJ_T0014485.1 MGP_BALBcJ_G0012582.1 mouse_genomes_project 4 32089177 32089611 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065773.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53607112 53661452 - MGP_BALBcJ_P0065773 Ctnnal1 protein_coding protein_coding MGP_BALBcJ_T0065774.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53608317 53610496 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0065775.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53613164 53613832 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0065776.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53620203 53636006 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0065777.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53622148 53661432 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0065778.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53622411 53625988 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0065779.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53625659 53634973 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0065780.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53637062 53661418 - MGP_BALBcJ_P0065780 Ctnnal1 protein_coding protein_coding MGP_BALBcJ_T0065781.1 MGP_BALBcJ_G0028292.1 mouse_genomes_project 4 53640938 53642656 - Ctnnal1 protein_coding processed_transcript MGP_BALBcJ_T0011535.1 MGP_BALBcJ_G0009660.1 mouse_genomes_project 4 15213430 15213718 + Gm25971 misc_RNA misc_RNA MGP_BALBcJ_T0014649.1 MGP_BALBcJ_G0012746.1 mouse_genomes_project 4 95849243 95849663 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065253.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39765121 39779096 - MGP_BALBcJ_P0065253 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065254.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39765121 39779491 - MGP_BALBcJ_P0065254 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065255.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39765121 39772997 - MGP_BALBcJ_P0065255 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065256.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39765121 39779068 - MGP_BALBcJ_P0065256 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065257.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39765121 39773000 - MGP_BALBcJ_P0065257 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065258.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39765121 39779491 - MGP_BALBcJ_P0065258 Fam214b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065259.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39769032 39773004 - MGP_BALBcJ_P0065259 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065260.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39769313 39770015 - MGP_BALBcJ_P0065260 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065261.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39769416 39772040 - MGP_BALBcJ_P0065261 Fam214b protein_coding protein_coding MGP_BALBcJ_T0065262.1 MGP_BALBcJ_G0028176.1 mouse_genomes_project 4 39769690 39779030 - Fam214b protein_coding processed_transcript MGP_BALBcJ_T0067012.1 MGP_BALBcJ_G0028576.1 mouse_genomes_project 4 112043030 112058829 + MGP_BALBcJ_P0067012 Tal1 protein_coding protein_coding MGP_BALBcJ_T0067013.1 MGP_BALBcJ_G0028576.1 mouse_genomes_project 4 112044042 112050063 + MGP_BALBcJ_P0067013 Tal1 protein_coding protein_coding MGP_BALBcJ_T0067014.1 MGP_BALBcJ_G0028576.1 mouse_genomes_project 4 112044415 112058301 + MGP_BALBcJ_P0067014 Tal1 protein_coding protein_coding MGP_BALBcJ_T0067015.1 MGP_BALBcJ_G0028576.1 mouse_genomes_project 4 112046113 112056912 + MGP_BALBcJ_P0067015 Tal1 protein_coding protein_coding MGP_BALBcJ_T0065958.1 MGP_BALBcJ_G0028342.1 mouse_genomes_project 4 60065928 60076797 - MGP_BALBcJ_P0065958 Ambp protein_coding protein_coding MGP_BALBcJ_T0065959.1 MGP_BALBcJ_G0028342.1 mouse_genomes_project 4 60075357 60077423 - MGP_BALBcJ_P0065959 Ambp protein_coding protein_coding MGP_BALBcJ_T0014602.1 MGP_BALBcJ_G0012699.1 mouse_genomes_project 4 76987273 76988416 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069190.1 MGP_BALBcJ_G0029097.1 mouse_genomes_project 4 146006437 146017396 - MGP_BALBcJ_P0069190 Agtrap protein_coding protein_coding MGP_BALBcJ_T0069191.1 MGP_BALBcJ_G0029097.1 mouse_genomes_project 4 146009891 146014189 - Agtrap protein_coding processed_transcript MGP_BALBcJ_T0069192.1 MGP_BALBcJ_G0029097.1 mouse_genomes_project 4 146013289 146017396 - Agtrap protein_coding retained_intron MGP_BALBcJ_T0014790.1 MGP_BALBcJ_G0012887.1 mouse_genomes_project 4 141197219 141197780 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066834.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105639171 105653357 + MGP_BALBcJ_P0066834 Cc2d1b protein_coding protein_coding MGP_BALBcJ_T0066835.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105642743 105645238 + MGP_BALBcJ_P0066835 Cc2d1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066836.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105642794 105653357 + MGP_BALBcJ_P0066836 Cc2d1b protein_coding protein_coding MGP_BALBcJ_T0066837.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105644986 105645994 + Cc2d1b protein_coding retained_intron MGP_BALBcJ_T0066838.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105645251 105646335 + Cc2d1b protein_coding retained_intron MGP_BALBcJ_T0066839.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105645279 105653339 + Cc2d1b protein_coding retained_intron MGP_BALBcJ_T0066840.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105648821 105649634 + Cc2d1b protein_coding retained_intron MGP_BALBcJ_T0066841.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105648855 105649665 + Cc2d1b protein_coding processed_transcript MGP_BALBcJ_T0066842.1 MGP_BALBcJ_G0028540.1 mouse_genomes_project 4 105649681 105652497 + Cc2d1b protein_coding retained_intron MGP_BALBcJ_T0014745.1 MGP_BALBcJ_G0012842.1 mouse_genomes_project 4 123800191 123800492 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068171.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129002599 129027172 + MGP_BALBcJ_P0068171 Mecr protein_coding protein_coding MGP_BALBcJ_T0068172.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129002622 129020260 + MGP_BALBcJ_P0068172 Mecr protein_coding protein_coding MGP_BALBcJ_T0068173.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129002634 129003137 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068174.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129013082 129020395 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068175.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129013141 129017568 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068176.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129017133 129024718 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068177.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129017159 129027172 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068178.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129019629 129024460 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068179.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129021106 129026987 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0068180.1 MGP_BALBcJ_G0028840.1 mouse_genomes_project 4 129024163 129027162 + Mecr protein_coding processed_transcript MGP_BALBcJ_T0064543.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2148004 2297891 + Fam110b protein_coding processed_transcript MGP_BALBcJ_T0064544.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2148035 2300610 + MGP_BALBcJ_P0064544 Fam110b protein_coding protein_coding MGP_BALBcJ_T0064545.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2148039 2235383 + Fam110b protein_coding retained_intron MGP_BALBcJ_T0064546.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2148104 2298003 + Fam110b protein_coding processed_transcript MGP_BALBcJ_T0064547.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2148149 2615660 + Fam110b protein_coding processed_transcript MGP_BALBcJ_T0064548.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2225618 2300610 + MGP_BALBcJ_P0064548 Fam110b protein_coding protein_coding MGP_BALBcJ_T0064549.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2272346 2298354 + MGP_BALBcJ_P0064549 Fam110b protein_coding protein_coding MGP_BALBcJ_T0064550.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2272346 2299455 + MGP_BALBcJ_P0064550 Fam110b protein_coding protein_coding MGP_BALBcJ_T0064551.1 MGP_BALBcJ_G0028002.1 mouse_genomes_project 4 2297592 2298040 + Fam110b protein_coding processed_transcript MGP_BALBcJ_T0064844.1 MGP_BALBcJ_G0028073.1 mouse_genomes_project 4 22124011 22327937 - MGP_BALBcJ_P0064844 Fut9 protein_coding protein_coding MGP_BALBcJ_T0064845.1 MGP_BALBcJ_G0028073.1 mouse_genomes_project 4 22133601 22328035 - MGP_BALBcJ_P0064845 Fut9 protein_coding protein_coding MGP_BALBcJ_T0064846.1 MGP_BALBcJ_G0028073.1 mouse_genomes_project 4 22325493 22327646 - Fut9 protein_coding processed_transcript MGP_BALBcJ_T0102525.1 MGP_BALBcJ_G0040341.1 mouse_genomes_project 4 93317757 93347184 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014777.1 MGP_BALBcJ_G0012874.1 mouse_genomes_project 4 134550336 134551023 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010610.1 MGP_BALBcJ_G0008735.1 mouse_genomes_project 4 129151371 129151443 - Gm27445 miRNA miRNA MGP_BALBcJ_T0102512.1 MGP_BALBcJ_G0040328.1 mouse_genomes_project 4 60300569 60317579 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066804.1 MGP_BALBcJ_G0028532.1 mouse_genomes_project 4 105189183 105225234 - MGP_BALBcJ_P0066804 Zyg11a protein_coding protein_coding MGP_BALBcJ_T0066805.1 MGP_BALBcJ_G0028532.1 mouse_genomes_project 4 105189183 105225209 - MGP_BALBcJ_P0066805 Zyg11a protein_coding protein_coding MGP_BALBcJ_T0068507.1 MGP_BALBcJ_G0028912.1 mouse_genomes_project 4 131753561 131775218 + MGP_BALBcJ_P0068507 Aunip protein_coding protein_coding MGP_BALBcJ_T0068520.1 MGP_BALBcJ_G0028916.1 mouse_genomes_project 4 131993991 132020456 - MGP_BALBcJ_P0068520 Ldlrap1 protein_coding protein_coding MGP_BALBcJ_T0068521.1 MGP_BALBcJ_G0028916.1 mouse_genomes_project 4 131999013 132002545 - Ldlrap1 protein_coding retained_intron MGP_BALBcJ_T0068522.1 MGP_BALBcJ_G0028916.1 mouse_genomes_project 4 132001853 132003288 - Ldlrap1 protein_coding retained_intron MGP_BALBcJ_T0065576.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42925644 42966843 - MGP_BALBcJ_P0065576 Xpa protein_coding protein_coding MGP_BALBcJ_T0065579.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42945491 42966752 - MGP_BALBcJ_P0065579 Xpa protein_coding unknown_likely_coding MGP_BALBcJ_T0065580.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42945496 42955962 - Xpa protein_coding processed_transcript MGP_BALBcJ_T0065581.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42945496 42955929 - MGP_BALBcJ_P0065581 Xpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065582.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42945496 42966843 - MGP_BALBcJ_P0065582 Xpa protein_coding protein_coding MGP_BALBcJ_T0065583.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42953248 42966836 - MGP_BALBcJ_P0065583 Xpa protein_coding protein_coding MGP_BALBcJ_T0065584.1 MGP_BALBcJ_G0028233.1 mouse_genomes_project 4 42954691 42956856 - Xpa protein_coding processed_transcript MGP_BALBcJ_T0101154.1 MGP_BALBcJ_G0039190.1 mouse_genomes_project 4 106558443 106558574 + Gm22497 snoRNA snoRNA MGP_BALBcJ_T0101701.1 MGP_BALBcJ_G0039681.1 mouse_genomes_project 4 40866925 40869156 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101702.1 MGP_BALBcJ_G0039681.1 mouse_genomes_project 4 40868270 40868576 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0010580.1 MGP_BALBcJ_G0008705.1 mouse_genomes_project 4 60181212 60181294 + Mir455 miRNA miRNA MGP_BALBcJ_T0066952.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717119 108830764 + MGP_BALBcJ_P0066952 Spata6 protein_coding protein_coding MGP_BALBcJ_T0066953.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717144 108768850 + MGP_BALBcJ_P0066953 Spata6 protein_coding protein_coding MGP_BALBcJ_T0066954.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717145 108809960 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066955.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717173 108778829 + MGP_BALBcJ_P0066955 Spata6 protein_coding protein_coding MGP_BALBcJ_T0066956.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717194 108768910 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066957.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717198 108779549 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066958.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717238 108780135 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066959.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717264 108779599 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066960.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108717453 108830806 + MGP_BALBcJ_P0066960 Spata6 protein_coding protein_coding MGP_BALBcJ_T0066961.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108775337 108829816 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066962.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108778099 108830756 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066963.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108778138 108780810 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066964.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108808849 108824393 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0066965.1 MGP_BALBcJ_G0028561.1 mouse_genomes_project 4 108823854 108829824 + Spata6 protein_coding processed_transcript MGP_BALBcJ_T0014591.1 MGP_BALBcJ_G0012688.1 mouse_genomes_project 4 72814802 72815698 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067342.1 MGP_BALBcJ_G0028644.1 mouse_genomes_project 4 114988490 115192680 - MGP_BALBcJ_P0067342 St3gal3 protein_coding protein_coding MGP_BALBcJ_T0067343.1 MGP_BALBcJ_G0028644.1 mouse_genomes_project 4 114988494 115192704 - MGP_BALBcJ_P0067343 St3gal3 protein_coding protein_coding MGP_BALBcJ_T0067344.1 MGP_BALBcJ_G0028644.1 mouse_genomes_project 4 114988496 115192672 - MGP_BALBcJ_P0067344 St3gal3 protein_coding protein_coding MGP_BALBcJ_T0067345.1 MGP_BALBcJ_G0028644.1 mouse_genomes_project 4 114996758 115087970 - MGP_BALBcJ_P0067345 St3gal3 protein_coding protein_coding MGP_BALBcJ_T0067346.1 MGP_BALBcJ_G0028644.1 mouse_genomes_project 4 114996850 115025053 - MGP_BALBcJ_P0067346 St3gal3 protein_coding protein_coding MGP_BALBcJ_T0066467.1 MGP_BALBcJ_G0028467.1 mouse_genomes_project 4 97077014 97436805 + MGP_BALBcJ_P0066467 Ror1 protein_coding protein_coding MGP_BALBcJ_T0069151.1 MGP_BALBcJ_G0029087.1 mouse_genomes_project 4 145753563 145774518 - MGP_BALBcJ_P0069151 Zfp933 protein_coding protein_coding MGP_BALBcJ_T0069152.1 MGP_BALBcJ_G0029087.1 mouse_genomes_project 4 145757324 145774518 - MGP_BALBcJ_P0069152 Zfp933 protein_coding protein_coding MGP_BALBcJ_T0064736.1 MGP_BALBcJ_G0028044.1 mouse_genomes_project 4 12487826 12504525 - MGP_BALBcJ_P0064736 Osgin2 protein_coding protein_coding MGP_BALBcJ_T0064737.1 MGP_BALBcJ_G0028044.1 mouse_genomes_project 4 12487932 12492762 - Osgin2 protein_coding processed_transcript MGP_BALBcJ_T0064738.1 MGP_BALBcJ_G0028044.1 mouse_genomes_project 4 12492604 12504433 - MGP_BALBcJ_P0064738 Osgin2 protein_coding protein_coding MGP_BALBcJ_T0064739.1 MGP_BALBcJ_G0028044.1 mouse_genomes_project 4 12493182 12504458 - Osgin2 protein_coding processed_transcript MGP_BALBcJ_T0064740.1 MGP_BALBcJ_G0028044.1 mouse_genomes_project 4 12495527 12497042 - Osgin2 protein_coding processed_transcript MGP_BALBcJ_T0008004.1 MGP_BALBcJ_G0006532.1 mouse_genomes_project 4 151194267 151195620 - Gm13173 lincRNA lincRNA MGP_BALBcJ_T0099834.1 MGP_BALBcJ_G0037870.1 mouse_genomes_project 4 48627546 48627711 - Gm22042 snRNA snRNA MGP_BALBcJ_T0067861.1 MGP_BALBcJ_G0028778.1 mouse_genomes_project 4 124536487 124539106 - MGP_BALBcJ_P0067861 Gja4 protein_coding protein_coding MGP_BALBcJ_T0014404.1 MGP_BALBcJ_G0012501.1 mouse_genomes_project 4 12010186 12010641 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069679.1 MGP_BALBcJ_G0029184.1 mouse_genomes_project 4 153038480 153039929 + MGP_BALBcJ_P0069679 Hes5 protein_coding protein_coding MGP_BALBcJ_T0069680.1 MGP_BALBcJ_G0029184.1 mouse_genomes_project 4 153038528 153038964 + Hes5 protein_coding processed_transcript MGP_BALBcJ_T0014757.1 MGP_BALBcJ_G0012854.1 mouse_genomes_project 4 129408927 129409248 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004506.1 MGP_BALBcJ_G0003917.1 mouse_genomes_project 4 117371494 117383622 + Foxo6os antisense antisense MGP_BALBcJ_T0068900.1 MGP_BALBcJ_G0029008.1 mouse_genomes_project 4 137440243 137671617 - MGP_BALBcJ_P0068900 Igsf21 protein_coding protein_coding MGP_BALBcJ_T0014774.1 MGP_BALBcJ_G0012871.1 mouse_genomes_project 4 133599189 133599712 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066417.1 MGP_BALBcJ_G0028457.1 mouse_genomes_project 4 95924463 95936370 + MGP_BALBcJ_P0066417 Usp1 protein_coding protein_coding MGP_BALBcJ_T0066418.1 MGP_BALBcJ_G0028457.1 mouse_genomes_project 4 95924532 95936370 + MGP_BALBcJ_P0066418 Usp1 protein_coding protein_coding MGP_BALBcJ_T0066419.1 MGP_BALBcJ_G0028457.1 mouse_genomes_project 4 95924617 95929097 + MGP_BALBcJ_P0066419 Usp1 protein_coding protein_coding MGP_BALBcJ_T0066420.1 MGP_BALBcJ_G0028457.1 mouse_genomes_project 4 95928923 95931708 + MGP_BALBcJ_P0066420 Usp1 protein_coding protein_coding MGP_BALBcJ_T0102515.1 MGP_BALBcJ_G0040331.1 mouse_genomes_project 4 83568721 83623392 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014409.1 MGP_BALBcJ_G0012506.1 mouse_genomes_project 4 12501641 12502963 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101155.1 MGP_BALBcJ_G0039191.1 mouse_genomes_project 4 114194411 114194481 - Gm22980 snoRNA snoRNA MGP_BALBcJ_T0014368.1 MGP_BALBcJ_G0012465.1 mouse_genomes_project 4 325241 325807 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069719.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332514 153338990 + Faap20 protein_coding processed_transcript MGP_BALBcJ_T0069720.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332573 153333651 + Faap20 protein_coding processed_transcript MGP_BALBcJ_T0069721.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332589 153333509 + Faap20 protein_coding processed_transcript MGP_BALBcJ_T0069722.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332609 153339034 + Faap20 protein_coding processed_transcript MGP_BALBcJ_T0069723.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332676 153339258 + MGP_BALBcJ_P0069723 Faap20 protein_coding protein_coding MGP_BALBcJ_T0069724.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332676 153339254 + MGP_BALBcJ_P0069724 Faap20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069725.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332699 153338954 + MGP_BALBcJ_P0069725 Faap20 protein_coding protein_coding MGP_BALBcJ_T0069726.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153332713 153339255 + MGP_BALBcJ_P0069726 Faap20 protein_coding protein_coding MGP_BALBcJ_T0069727.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153333030 153338989 + MGP_BALBcJ_P0069727 Faap20 protein_coding protein_coding MGP_BALBcJ_T0069728.1 MGP_BALBcJ_G0029191.1 mouse_genomes_project 4 153333394 153339019 + Faap20 protein_coding retained_intron MGP_BALBcJ_T0069290.1 MGP_BALBcJ_G0029116.1 mouse_genomes_project 4 147077262 147087546 - MGP_BALBcJ_P0069290 Apitd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069291.1 MGP_BALBcJ_G0029116.1 mouse_genomes_project 4 147078478 147087574 - MGP_BALBcJ_P0069291 Apitd1 protein_coding protein_coding MGP_BALBcJ_T0069292.1 MGP_BALBcJ_G0029116.1 mouse_genomes_project 4 147078592 147087567 - MGP_BALBcJ_P0069292 Apitd1 protein_coding protein_coding MGP_BALBcJ_T0069293.1 MGP_BALBcJ_G0029116.1 mouse_genomes_project 4 147078599 147080509 - Apitd1 protein_coding retained_intron MGP_BALBcJ_T0069294.1 MGP_BALBcJ_G0029116.1 mouse_genomes_project 4 147078828 147087563 - MGP_BALBcJ_P0069294 Apitd1 protein_coding protein_coding MGP_BALBcJ_T0069295.1 MGP_BALBcJ_G0029116.1 mouse_genomes_project 4 147081417 147087575 - MGP_BALBcJ_P0069295 Apitd1 protein_coding protein_coding MGP_BALBcJ_T0010585.1 MGP_BALBcJ_G0008710.1 mouse_genomes_project 4 85947147 85947253 - Mir31 miRNA miRNA MGP_BALBcJ_T0066936.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 107403427 107969112 + MGP_BALBcJ_P0066936 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066937.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 107403464 108660945 + MGP_BALBcJ_P0066937 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066938.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 107403464 107672474 + MGP_BALBcJ_P0066938 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066939.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 107403464 108565730 + MGP_BALBcJ_P0066939 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066940.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 107403557 108654071 + MGP_BALBcJ_P0066940 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066941.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 107403557 108654071 + MGP_BALBcJ_P0066941 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066942.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 108128052 108255809 + Agbl4 protein_coding processed_transcript MGP_BALBcJ_T0066943.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 108128122 108616327 + MGP_BALBcJ_P0066943 Agbl4 protein_coding protein_coding MGP_BALBcJ_T0066950.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 108565414 108653130 + Agbl4 protein_coding processed_transcript MGP_BALBcJ_T0066951.1 MGP_BALBcJ_G0028559.1 mouse_genomes_project 4 108565444 108654068 + Agbl4 protein_coding processed_transcript MGP_BALBcJ_T0067875.1 MGP_BALBcJ_G0028785.1 mouse_genomes_project 4 125825307 125831731 - Zscan20 protein_coding processed_transcript MGP_BALBcJ_T0067876.1 MGP_BALBcJ_G0028785.1 mouse_genomes_project 4 125825315 125852554 - MGP_BALBcJ_P0067876 Zscan20 protein_coding protein_coding MGP_BALBcJ_T0067877.1 MGP_BALBcJ_G0028785.1 mouse_genomes_project 4 125827143 125852498 - MGP_BALBcJ_P0067877 Zscan20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067878.1 MGP_BALBcJ_G0028785.1 mouse_genomes_project 4 125843902 125852490 - Zscan20 protein_coding retained_intron MGP_BALBcJ_T0067879.1 MGP_BALBcJ_G0028785.1 mouse_genomes_project 4 125846906 125852451 - MGP_BALBcJ_P0067879 Zscan20 protein_coding protein_coding MGP_BALBcJ_T0067880.1 MGP_BALBcJ_G0028785.1 mouse_genomes_project 4 125846940 125852437 - MGP_BALBcJ_P0067880 Zscan20 protein_coding protein_coding MGP_BALBcJ_T0069554.1 MGP_BALBcJ_G0029162.1 mouse_genomes_project 4 150365205 150417974 + MGP_BALBcJ_P0069554 Chd5 protein_coding protein_coding MGP_BALBcJ_T0069555.1 MGP_BALBcJ_G0029162.1 mouse_genomes_project 4 150365205 150417974 + MGP_BALBcJ_P0069555 Chd5 protein_coding protein_coding MGP_BALBcJ_T0069556.1 MGP_BALBcJ_G0029162.1 mouse_genomes_project 4 150366320 150417961 + MGP_BALBcJ_P0069556 Chd5 protein_coding protein_coding MGP_BALBcJ_T0069557.1 MGP_BALBcJ_G0029162.1 mouse_genomes_project 4 150369026 150381036 + Chd5 protein_coding processed_transcript MGP_BALBcJ_T0069558.1 MGP_BALBcJ_G0029162.1 mouse_genomes_project 4 150399388 150417961 + Chd5 protein_coding processed_transcript MGP_BALBcJ_T0068804.1 MGP_BALBcJ_G0028982.1 mouse_genomes_project 4 135950482 136016906 - MGP_BALBcJ_P0068804 Vwa5b1 protein_coding protein_coding MGP_BALBcJ_T0068805.1 MGP_BALBcJ_G0028982.1 mouse_genomes_project 4 135952468 135962541 - MGP_BALBcJ_P0068805 Vwa5b1 protein_coding protein_coding MGP_BALBcJ_T0068806.1 MGP_BALBcJ_G0028982.1 mouse_genomes_project 4 135963087 136017057 - MGP_BALBcJ_P0068806 Vwa5b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068807.1 MGP_BALBcJ_G0028982.1 mouse_genomes_project 4 135976004 135988104 - Vwa5b1 protein_coding processed_transcript MGP_BALBcJ_T0068808.1 MGP_BALBcJ_G0028982.1 mouse_genomes_project 4 135981678 135988571 - Vwa5b1 protein_coding processed_transcript MGP_BALBcJ_T0004429.1 MGP_BALBcJ_G0003859.1 mouse_genomes_project 4 40491324 40494756 + antisense antisense MGP_BALBcJ_T0014787.1 MGP_BALBcJ_G0012884.1 mouse_genomes_project 4 140894277 140895035 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014539.1 MGP_BALBcJ_G0012636.1 mouse_genomes_project 4 51469735 51470303 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066359.1 MGP_BALBcJ_G0028440.1 mouse_genomes_project 4 92990718 93019175 - MGP_BALBcJ_P0066359 Cyp2j13 protein_coding protein_coding MGP_BALBcJ_T0066360.1 MGP_BALBcJ_G0028440.1 mouse_genomes_project 4 93005843 93033118 - MGP_BALBcJ_P0066360 Cyp2j13 protein_coding protein_coding MGP_BALBcJ_T0066361.1 MGP_BALBcJ_G0028440.1 mouse_genomes_project 4 93008414 93033124 - MGP_BALBcJ_P0066361 Cyp2j13 protein_coding protein_coding MGP_BALBcJ_T0066362.1 MGP_BALBcJ_G0028440.1 mouse_genomes_project 4 93008414 93033102 - MGP_BALBcJ_P0066362 Cyp2j13 protein_coding protein_coding MGP_BALBcJ_T0066270.1 MGP_BALBcJ_G0028416.1 mouse_genomes_project 4 85853534 85854177 + MGP_BALBcJ_P0066270 protein_coding protein_coding MGP_BALBcJ_T0068913.1 MGP_BALBcJ_G0029010.1 mouse_genomes_project 4 138142940 138164708 + MGP_BALBcJ_P0068913 Rcc2 protein_coding protein_coding MGP_BALBcJ_T0068914.1 MGP_BALBcJ_G0029010.1 mouse_genomes_project 4 138143872 138164710 + MGP_BALBcJ_P0068914 Rcc2 protein_coding protein_coding MGP_BALBcJ_T0068915.1 MGP_BALBcJ_G0029010.1 mouse_genomes_project 4 138143872 138152257 + MGP_BALBcJ_P0068915 Rcc2 protein_coding protein_coding MGP_BALBcJ_T0068916.1 MGP_BALBcJ_G0029010.1 mouse_genomes_project 4 138156194 138158821 + Rcc2 protein_coding processed_transcript MGP_BALBcJ_T0068917.1 MGP_BALBcJ_G0029010.1 mouse_genomes_project 4 138156221 138158729 + Rcc2 protein_coding processed_transcript MGP_BALBcJ_T0007836.1 MGP_BALBcJ_G0006403.1 mouse_genomes_project 4 55462218 55472370 - Gm12580 lincRNA lincRNA MGP_BALBcJ_T0010552.1 MGP_BALBcJ_G0008677.1 mouse_genomes_project 4 6127114 6127186 + Gm25677 miRNA miRNA MGP_BALBcJ_T0098597.1 MGP_BALBcJ_G0036651.1 mouse_genomes_project 4 45567661 45567773 - Gm24573 rRNA rRNA MGP_BALBcJ_T0067948.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126441462 126472663 + MGP_BALBcJ_P0067948 Yars protein_coding protein_coding MGP_BALBcJ_T0067949.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126441604 126449142 + Yars protein_coding retained_intron MGP_BALBcJ_T0067950.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126448815 126462300 + MGP_BALBcJ_P0067950 Yars protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067951.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126448934 126460321 + Yars protein_coding processed_transcript MGP_BALBcJ_T0067952.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126461243 126462574 + Yars protein_coding retained_intron MGP_BALBcJ_T0067953.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126463965 126467710 + Yars protein_coding retained_intron MGP_BALBcJ_T0067954.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126464417 126471719 + Yars protein_coding processed_transcript MGP_BALBcJ_T0067955.1 MGP_BALBcJ_G0028798.1 mouse_genomes_project 4 126465739 126466918 + Yars protein_coding retained_intron MGP_BALBcJ_T0014429.1 MGP_BALBcJ_G0012526.1 mouse_genomes_project 4 18148899 18149698 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068127.1 MGP_BALBcJ_G0028832.1 mouse_genomes_project 4 127621524 127666450 - MGP_BALBcJ_P0068127 Zcchc17 protein_coding protein_coding MGP_BALBcJ_T0068128.1 MGP_BALBcJ_G0028832.1 mouse_genomes_project 4 127622420 127624881 - Zcchc17 protein_coding processed_transcript MGP_BALBcJ_T0068129.1 MGP_BALBcJ_G0028832.1 mouse_genomes_project 4 127622836 127651366 - Zcchc17 protein_coding processed_transcript MGP_BALBcJ_T0068130.1 MGP_BALBcJ_G0028832.1 mouse_genomes_project 4 127643120 127644849 - Zcchc17 protein_coding processed_transcript MGP_BALBcJ_T0068131.1 MGP_BALBcJ_G0028832.1 mouse_genomes_project 4 127658674 127666423 - Zcchc17 protein_coding retained_intron MGP_BALBcJ_T0064512.1 MGP_BALBcJ_G0027994.1 mouse_genomes_project 4 357355 363463 - MGP_BALBcJ_P0064512 Rps20 protein_coding protein_coding MGP_BALBcJ_T0064513.1 MGP_BALBcJ_G0027994.1 mouse_genomes_project 4 360505 363031 - Rps20 protein_coding retained_intron MGP_BALBcJ_T0064514.1 MGP_BALBcJ_G0027994.1 mouse_genomes_project 4 360508 363286 - Rps20 protein_coding retained_intron MGP_BALBcJ_T0064515.1 MGP_BALBcJ_G0027994.1 mouse_genomes_project 4 360536 363284 - MGP_BALBcJ_P0064515 Rps20 protein_coding unknown_likely_coding MGP_BALBcJ_T0067687.1 MGP_BALBcJ_G0028738.1 mouse_genomes_project 4 122025868 122030441 + MGP_BALBcJ_P0067687 Yrdc protein_coding protein_coding MGP_BALBcJ_T0067688.1 MGP_BALBcJ_G0028738.1 mouse_genomes_project 4 122026015 122030274 + MGP_BALBcJ_P0067688 Yrdc protein_coding protein_coding MGP_BALBcJ_T0067689.1 MGP_BALBcJ_G0028738.1 mouse_genomes_project 4 122027095 122029917 + Yrdc protein_coding retained_intron MGP_BALBcJ_T0099854.1 MGP_BALBcJ_G0037890.1 mouse_genomes_project 4 98133145 98133249 + Gm24468 snRNA snRNA MGP_BALBcJ_T0010613.1 MGP_BALBcJ_G0008738.1 mouse_genomes_project 4 130384868 130384930 + Mir7017 miRNA miRNA MGP_BALBcJ_T0068288.1 MGP_BALBcJ_G0028862.1 mouse_genomes_project 4 129966615 129981465 - MGP_BALBcJ_P0068288 Themis2 protein_coding protein_coding MGP_BALBcJ_T0065416.1 MGP_BALBcJ_G0028201.1 mouse_genomes_project 4 40508663 40509623 - MGP_BALBcJ_P0065416 Olfr159 protein_coding protein_coding MGP_BALBcJ_T0067502.1 MGP_BALBcJ_G0028686.1 mouse_genomes_project 4 116729615 116731605 + MGP_BALBcJ_P0067502 Guca2a protein_coding protein_coding MGP_BALBcJ_T0068032.1 MGP_BALBcJ_G0028815.1 mouse_genomes_project 4 126899946 126903911 - MGP_BALBcJ_P0068032 protein_coding protein_coding MGP_BALBcJ_T0068033.1 MGP_BALBcJ_G0028815.1 mouse_genomes_project 4 126900580 126901842 - protein_coding processed_transcript MGP_BALBcJ_T0068034.1 MGP_BALBcJ_G0028815.1 mouse_genomes_project 4 126902150 126903888 - protein_coding retained_intron MGP_BALBcJ_T0068035.1 MGP_BALBcJ_G0028815.1 mouse_genomes_project 4 126902909 126903908 - MGP_BALBcJ_P0068035 protein_coding protein_coding MGP_BALBcJ_T0068036.1 MGP_BALBcJ_G0028815.1 mouse_genomes_project 4 126903053 126903892 - protein_coding processed_transcript MGP_BALBcJ_T0067454.1 MGP_BALBcJ_G0028677.1 mouse_genomes_project 4 116326543 116330944 + MGP_BALBcJ_P0067454 Cldn19 protein_coding protein_coding MGP_BALBcJ_T0067455.1 MGP_BALBcJ_G0028677.1 mouse_genomes_project 4 116326638 116333529 + MGP_BALBcJ_P0067455 Cldn19 protein_coding protein_coding MGP_BALBcJ_T0065314.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40174599 40182755 - MGP_BALBcJ_P0065314 Cd72 protein_coding protein_coding MGP_BALBcJ_T0065315.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40175861 40182691 - MGP_BALBcJ_P0065315 Cd72 protein_coding protein_coding MGP_BALBcJ_T0065316.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40175861 40182712 - MGP_BALBcJ_P0065316 Cd72 protein_coding protein_coding MGP_BALBcJ_T0065317.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40175861 40182756 - MGP_BALBcJ_P0065317 Cd72 protein_coding protein_coding MGP_BALBcJ_T0065318.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40175872 40182754 - MGP_BALBcJ_P0065318 Cd72 protein_coding protein_coding MGP_BALBcJ_T0065319.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40176167 40178070 - Cd72 protein_coding retained_intron MGP_BALBcJ_T0065320.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40177972 40180500 - Cd72 protein_coding retained_intron MGP_BALBcJ_T0065321.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40180437 40182740 - Cd72 protein_coding retained_intron MGP_BALBcJ_T0065322.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40180448 40182451 - Cd72 protein_coding processed_transcript MGP_BALBcJ_T0065323.1 MGP_BALBcJ_G0028182.1 mouse_genomes_project 4 40180728 40182754 - Cd72 protein_coding processed_transcript MGP_BALBcJ_T0004501.1 MGP_BALBcJ_G0003912.1 mouse_genomes_project 4 115688347 115691588 - Gm12853 antisense antisense MGP_BALBcJ_T0014380.1 MGP_BALBcJ_G0012477.1 mouse_genomes_project 4 4925717 4926049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101103.1 MGP_BALBcJ_G0039139.1 mouse_genomes_project 4 12403557 12403625 - Gm26148 snoRNA snoRNA MGP_BALBcJ_T0014369.1 MGP_BALBcJ_G0012466.1 mouse_genomes_project 4 509289 509789 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069069.1 MGP_BALBcJ_G0029047.1 mouse_genomes_project 4 139498612 139555478 - MGP_BALBcJ_P0069069 Tmem51 protein_coding protein_coding MGP_BALBcJ_T0014399.1 MGP_BALBcJ_G0012496.1 mouse_genomes_project 4 10643226 10643983 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004504.1 MGP_BALBcJ_G0003915.1 mouse_genomes_project 4 116203244 116208316 - Gm12868 antisense antisense MGP_BALBcJ_T0102530.1 MGP_BALBcJ_G0040346.1 mouse_genomes_project 4 111161531 111202717 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102518.1 MGP_BALBcJ_G0040334.1 mouse_genomes_project 4 85644938 85645505 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099839.1 MGP_BALBcJ_G0037875.1 mouse_genomes_project 4 60587093 60587200 - Gm24234 snRNA snRNA MGP_BALBcJ_T0068820.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136184062 136204327 - MGP_BALBcJ_P0068820 Pla2g5 protein_coding protein_coding MGP_BALBcJ_T0068821.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136184062 136204319 - MGP_BALBcJ_P0068821 Pla2g5 protein_coding protein_coding MGP_BALBcJ_T0068822.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136184067 136249944 - MGP_BALBcJ_P0068822 Pla2g5 protein_coding protein_coding MGP_BALBcJ_T0068823.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136185166 136197113 - MGP_BALBcJ_P0068823 Pla2g5 protein_coding protein_coding MGP_BALBcJ_T0068824.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136185382 136197159 - Pla2g5 protein_coding processed_transcript MGP_BALBcJ_T0068825.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136189418 136204321 - Pla2g5 protein_coding processed_transcript MGP_BALBcJ_T0068826.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136189432 136204292 - Pla2g5 protein_coding processed_transcript MGP_BALBcJ_T0068827.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136191239 136194683 - Pla2g5 protein_coding processed_transcript MGP_BALBcJ_T0068828.1 MGP_BALBcJ_G0028987.1 mouse_genomes_project 4 136245379 136249924 - Pla2g5 protein_coding processed_transcript MGP_BALBcJ_T0064580.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5150350 5216180 + Chd7 protein_coding retained_intron MGP_BALBcJ_T0064581.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5150438 5245988 + MGP_BALBcJ_P0064581 Chd7 protein_coding protein_coding MGP_BALBcJ_T0064582.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5150889 5327369 + MGP_BALBcJ_P0064582 Chd7 protein_coding protein_coding MGP_BALBcJ_T0064583.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5151333 5328217 + MGP_BALBcJ_P0064583 Chd7 protein_coding protein_coding MGP_BALBcJ_T0064584.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5170339 5211761 + MGP_BALBcJ_P0064584 Chd7 protein_coding protein_coding MGP_BALBcJ_T0064585.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5211636 5327783 + MGP_BALBcJ_P0064585 Chd7 protein_coding protein_coding MGP_BALBcJ_T0064586.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5211703 5327213 + MGP_BALBcJ_P0064586 Chd7 protein_coding unknown_likely_coding MGP_BALBcJ_T0064587.1 MGP_BALBcJ_G0028010.1 mouse_genomes_project 4 5300406 5304793 + Chd7 protein_coding processed_transcript MGP_BALBcJ_T0014682.1 MGP_BALBcJ_G0012779.1 mouse_genomes_project 4 105328425 105328714 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014683.1 MGP_BALBcJ_G0012780.1 mouse_genomes_project 4 105466502 105467038 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065745.1 MGP_BALBcJ_G0028283.1 mouse_genomes_project 4 50645324 50682660 + MGP_BALBcJ_P0065745 Tmem38b protein_coding protein_coding MGP_BALBcJ_T0065746.1 MGP_BALBcJ_G0028283.1 mouse_genomes_project 4 50645334 50651988 + Tmem38b protein_coding processed_transcript MGP_BALBcJ_T0065747.1 MGP_BALBcJ_G0028283.1 mouse_genomes_project 4 50645336 50667095 + Tmem38b protein_coding processed_transcript MGP_BALBcJ_T0065748.1 MGP_BALBcJ_G0028283.1 mouse_genomes_project 4 50659720 50675055 + MGP_BALBcJ_P0065748 Tmem38b protein_coding protein_coding MGP_BALBcJ_T0067296.1 MGP_BALBcJ_G0028636.1 mouse_genomes_project 4 114796496 114804265 - MGP_BALBcJ_P0067296 protein_coding protein_coding MGP_BALBcJ_T0007934.1 MGP_BALBcJ_G0006479.1 mouse_genomes_project 4 126094642 126122923 + Gm12968 lincRNA lincRNA MGP_BALBcJ_T0014671.1 MGP_BALBcJ_G0012768.1 mouse_genomes_project 4 102504249 102504700 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007912.1 MGP_BALBcJ_G0006466.1 mouse_genomes_project 4 121064097 121070663 - Gm26606 lincRNA lincRNA MGP_BALBcJ_T0004500.1 MGP_BALBcJ_G0003911.1 mouse_genomes_project 4 115031676 115050539 + 9530034E10Rik antisense antisense MGP_BALBcJ_T0004565.1 MGP_BALBcJ_G0003962.1 mouse_genomes_project 4 142141435 142142869 + Pramef12os antisense antisense MGP_BALBcJ_T0014573.1 MGP_BALBcJ_G0012670.1 mouse_genomes_project 4 68251733 68252170 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099862.1 MGP_BALBcJ_G0037898.1 mouse_genomes_project 4 113700753 113700863 + Gm25137 snRNA snRNA MGP_BALBcJ_T0066004.1 MGP_BALBcJ_G0028355.1 mouse_genomes_project 4 60788560 60818380 - MGP_BALBcJ_P0066004 Tnfsf8 protein_coding protein_coding MGP_BALBcJ_T0007840.1 MGP_BALBcJ_G0006407.1 mouse_genomes_project 4 60550902 60560422 - lincRNA lincRNA MGP_BALBcJ_T0014531.1 MGP_BALBcJ_G0012628.1 mouse_genomes_project 4 49631343 49631973 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068809.1 MGP_BALBcJ_G0028983.1 mouse_genomes_project 4 136092910 136108576 - MGP_BALBcJ_P0068809 Ubxn10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068810.1 MGP_BALBcJ_G0028983.1 mouse_genomes_project 4 136101327 136108620 - MGP_BALBcJ_P0068810 Ubxn10 protein_coding protein_coding MGP_BALBcJ_T0068811.1 MGP_BALBcJ_G0028983.1 mouse_genomes_project 4 136101327 136120532 - MGP_BALBcJ_P0068811 Ubxn10 protein_coding protein_coding MGP_BALBcJ_T0068812.1 MGP_BALBcJ_G0028983.1 mouse_genomes_project 4 136101627 136108213 - MGP_BALBcJ_P0068812 Ubxn10 protein_coding protein_coding MGP_BALBcJ_T0068816.1 MGP_BALBcJ_G0028983.1 mouse_genomes_project 4 136115250 136120501 - Ubxn10 protein_coding processed_transcript MGP_BALBcJ_T0014755.1 MGP_BALBcJ_G0012852.1 mouse_genomes_project 4 129254245 129254653 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101135.1 MGP_BALBcJ_G0039171.1 mouse_genomes_project 4 63501906 63502039 + Gm25480 snoRNA snoRNA MGP_BALBcJ_T0007999.1 MGP_BALBcJ_G0006527.1 mouse_genomes_project 4 148024341 148032861 + Gm13067 lincRNA lincRNA MGP_BALBcJ_T0004456.1 MGP_BALBcJ_G0003883.1 mouse_genomes_project 4 91941401 91997551 + Gm12694 antisense antisense MGP_BALBcJ_T0101160.1 MGP_BALBcJ_G0039196.1 mouse_genomes_project 4 116046717 116046842 + Gm24352 snoRNA snoRNA MGP_BALBcJ_T0099874.1 MGP_BALBcJ_G0037910.1 mouse_genomes_project 4 124330501 124330607 - Gm25600 snRNA snRNA MGP_BALBcJ_T0004444.1 MGP_BALBcJ_G0003872.1 mouse_genomes_project 4 59040025 59047129 + Gm12910 antisense antisense MGP_BALBcJ_T0007998.1 MGP_BALBcJ_G0006526.1 mouse_genomes_project 4 147744074 147744762 - Gm13073 lincRNA lincRNA MGP_BALBcJ_T0014505.1 MGP_BALBcJ_G0012602.1 mouse_genomes_project 4 40537525 40538885 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098720.1 MGP_BALBcJ_G0036774.1 mouse_genomes_project 4 40222151 40222422 - Rmrp ribozyme ribozyme MGP_BALBcJ_T0014477.1 MGP_BALBcJ_G0012574.1 mouse_genomes_project 4 29867615 29867805 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069375.1 MGP_BALBcJ_G0029129.1 mouse_genomes_project 4 147952743 147976687 - MGP_BALBcJ_P0069375 H6pd protein_coding protein_coding MGP_BALBcJ_T0069376.1 MGP_BALBcJ_G0029129.1 mouse_genomes_project 4 147952743 147982353 - MGP_BALBcJ_P0069376 H6pd protein_coding protein_coding MGP_BALBcJ_T0069377.1 MGP_BALBcJ_G0029129.1 mouse_genomes_project 4 147969413 147974822 - MGP_BALBcJ_P0069377 H6pd protein_coding protein_coding MGP_BALBcJ_T0069378.1 MGP_BALBcJ_G0029129.1 mouse_genomes_project 4 147973341 147974847 - H6pd protein_coding processed_transcript MGP_BALBcJ_T0065831.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55240005 55304720 - MGP_BALBcJ_P0065831 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065832.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55240005 55365820 - MGP_BALBcJ_P0065832 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065833.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55240005 55366016 - MGP_BALBcJ_P0065833 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065834.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55240005 55365774 - MGP_BALBcJ_P0065834 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065835.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55240005 55366091 - MGP_BALBcJ_P0065835 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065836.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55292467 55360905 - MGP_BALBcJ_P0065836 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065837.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55292522 55366361 - MGP_BALBcJ_P0065837 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0065838.1 MGP_BALBcJ_G0028305.1 mouse_genomes_project 4 55292556 55365647 - MGP_BALBcJ_P0065838 Lpar1 protein_coding protein_coding MGP_BALBcJ_T0007832.1 MGP_BALBcJ_G0006401.1 mouse_genomes_project 4 54171451 54178361 - lincRNA lincRNA MGP_BALBcJ_T0007833.1 MGP_BALBcJ_G0006401.1 mouse_genomes_project 4 54171775 54178380 - lincRNA lincRNA MGP_BALBcJ_T0007834.1 MGP_BALBcJ_G0006401.1 mouse_genomes_project 4 54171877 54178340 - lincRNA lincRNA MGP_BALBcJ_T0014687.1 MGP_BALBcJ_G0012784.1 mouse_genomes_project 4 106395288 106396447 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004431.1 MGP_BALBcJ_G0003861.1 mouse_genomes_project 4 41715766 41719093 + Gm12493 antisense antisense MGP_BALBcJ_T0064926.1 MGP_BALBcJ_G0028094.1 mouse_genomes_project 4 30718505 30744743 - MGP_BALBcJ_P0064926 Spaca1 protein_coding protein_coding MGP_BALBcJ_T0064927.1 MGP_BALBcJ_G0028094.1 mouse_genomes_project 4 30718507 30735799 - MGP_BALBcJ_P0064927 Spaca1 protein_coding protein_coding MGP_BALBcJ_T0064928.1 MGP_BALBcJ_G0028094.1 mouse_genomes_project 4 30721945 30744895 - MGP_BALBcJ_P0064928 Spaca1 protein_coding protein_coding MGP_BALBcJ_T0069136.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142724853 142949701 - MGP_BALBcJ_P0069136 Vps13d protein_coding protein_coding MGP_BALBcJ_T0069137.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142724857 142945362 - MGP_BALBcJ_P0069137 Vps13d protein_coding protein_coding MGP_BALBcJ_T0069138.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142724857 142846612 - MGP_BALBcJ_P0069138 Vps13d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069139.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142726827 142909771 - MGP_BALBcJ_P0069139 Vps13d protein_coding protein_coding MGP_BALBcJ_T0069140.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142727157 142736667 - Vps13d protein_coding processed_transcript MGP_BALBcJ_T0069141.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142732529 142808457 - Vps13d protein_coding retained_intron MGP_BALBcJ_T0069142.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142770818 142805348 - Vps13d protein_coding processed_transcript MGP_BALBcJ_T0069143.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142807295 142812512 - Vps13d protein_coding retained_intron MGP_BALBcJ_T0069144.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142824281 142826916 - Vps13d protein_coding retained_intron MGP_BALBcJ_T0069145.1 MGP_BALBcJ_G0029083.1 mouse_genomes_project 4 142931030 142949691 - Vps13d protein_coding retained_intron MGP_BALBcJ_T0068797.1 MGP_BALBcJ_G0028978.1 mouse_genomes_project 4 135711141 135716351 - Cda protein_coding retained_intron MGP_BALBcJ_T0068798.1 MGP_BALBcJ_G0028978.1 mouse_genomes_project 4 135711245 135741867 - MGP_BALBcJ_P0068798 Cda protein_coding protein_coding MGP_BALBcJ_T0014403.1 MGP_BALBcJ_G0012500.1 mouse_genomes_project 4 11964520 11964940 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014395.1 MGP_BALBcJ_G0012492.1 mouse_genomes_project 4 8634824 8635184 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065586.1 MGP_BALBcJ_G0028235.1 mouse_genomes_project 4 43148066 43166435 - MGP_BALBcJ_P0065586 Trmo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065587.1 MGP_BALBcJ_G0028235.1 mouse_genomes_project 4 43148540 43166440 - MGP_BALBcJ_P0065587 Trmo protein_coding protein_coding MGP_BALBcJ_T0065588.1 MGP_BALBcJ_G0028235.1 mouse_genomes_project 4 43151427 43166454 - MGP_BALBcJ_P0065588 Trmo protein_coding protein_coding MGP_BALBcJ_T0007858.1 MGP_BALBcJ_G0006423.1 mouse_genomes_project 4 81683996 81684813 + Gm12415 lincRNA lincRNA MGP_BALBcJ_T0067248.1 MGP_BALBcJ_G0028627.1 mouse_genomes_project 4 114166676 114171902 - MGP_BALBcJ_P0067248 Plk3 protein_coding protein_coding MGP_BALBcJ_T0067249.1 MGP_BALBcJ_G0028627.1 mouse_genomes_project 4 114166684 114171982 - Plk3 protein_coding processed_transcript MGP_BALBcJ_T0018011.1 MGP_BALBcJ_G0015485.1 mouse_genomes_project 4 49624484 49638125 + 4930552N02Rik processed_transcript processed_transcript MGP_BALBcJ_T0099829.1 MGP_BALBcJ_G0037865.1 mouse_genomes_project 4 39925800 39925865 - Gm25010 snRNA snRNA MGP_BALBcJ_T0065993.1 MGP_BALBcJ_G0028350.1 mouse_genomes_project 4 60499630 60505618 + MGP_BALBcJ_P0065993 Atp6v1g1 protein_coding protein_coding MGP_BALBcJ_T0014613.1 MGP_BALBcJ_G0012710.1 mouse_genomes_project 4 81862468 81862991 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001422.1 MGP_BALBcJ_G0001344.1 mouse_genomes_project 4 137748970 137751619 - TEC TEC MGP_BALBcJ_T0007940.1 MGP_BALBcJ_G0006484.1 mouse_genomes_project 4 127201714 127204644 + E330017L17Rik lincRNA lincRNA MGP_BALBcJ_T0007941.1 MGP_BALBcJ_G0006484.1 mouse_genomes_project 4 127201724 127204509 + E330017L17Rik lincRNA lincRNA MGP_BALBcJ_T0007942.1 MGP_BALBcJ_G0006484.1 mouse_genomes_project 4 127201756 127204263 + E330017L17Rik lincRNA lincRNA MGP_BALBcJ_T0007943.1 MGP_BALBcJ_G0006484.1 mouse_genomes_project 4 127201931 127214707 + E330017L17Rik lincRNA lincRNA MGP_BALBcJ_T0014450.1 MGP_BALBcJ_G0012547.1 mouse_genomes_project 4 23122084 23122762 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065814.1 MGP_BALBcJ_G0028300.1 mouse_genomes_project 4 54728844 54736658 - MGP_BALBcJ_P0065814 D630039A03Rik protein_coding protein_coding MGP_BALBcJ_T0017999.1 MGP_BALBcJ_G0015476.1 mouse_genomes_project 4 21503806 21788841 + processed_transcript processed_transcript MGP_BALBcJ_T0064851.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25415766 25572080 + MGP_BALBcJ_P0064851 Epha7 protein_coding protein_coding MGP_BALBcJ_T0064852.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25415766 25550691 + MGP_BALBcJ_P0064852 Epha7 protein_coding protein_coding MGP_BALBcJ_T0064853.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25415787 25571396 + MGP_BALBcJ_P0064853 Epha7 protein_coding protein_coding MGP_BALBcJ_T0064854.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25415885 25572080 + MGP_BALBcJ_P0064854 Epha7 protein_coding protein_coding MGP_BALBcJ_T0064855.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25415961 25476313 + Epha7 protein_coding processed_transcript MGP_BALBcJ_T0064856.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25418064 25423825 + Epha7 protein_coding processed_transcript MGP_BALBcJ_T0064857.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25474352 25547144 + Epha7 protein_coding processed_transcript MGP_BALBcJ_T0064858.1 MGP_BALBcJ_G0028075.1 mouse_genomes_project 4 25474435 25549978 + Epha7 protein_coding processed_transcript MGP_BALBcJ_T0014583.1 MGP_BALBcJ_G0012680.1 mouse_genomes_project 4 71580840 71581493 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065681.1 MGP_BALBcJ_G0028262.1 mouse_genomes_project 4 46332825 46343082 + MGP_BALBcJ_P0065681 Zfp189 protein_coding protein_coding MGP_BALBcJ_T0065682.1 MGP_BALBcJ_G0028262.1 mouse_genomes_project 4 46332866 46343082 + MGP_BALBcJ_P0065682 Zfp189 protein_coding protein_coding MGP_BALBcJ_T0014587.1 MGP_BALBcJ_G0012684.1 mouse_genomes_project 4 72053540 72054921 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014392.1 MGP_BALBcJ_G0012489.1 mouse_genomes_project 4 7870279 7870694 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004402.1 MGP_BALBcJ_G0003838.1 mouse_genomes_project 4 5747685 5751062 - Gm11816 antisense antisense MGP_BALBcJ_T0004403.1 MGP_BALBcJ_G0003838.1 mouse_genomes_project 4 5749540 5751004 - Gm11816 antisense antisense MGP_BALBcJ_T0065538.1 MGP_BALBcJ_G0028224.1 mouse_genomes_project 4 42182832 42247234 - Shb protein_coding processed_transcript MGP_BALBcJ_T0065539.1 MGP_BALBcJ_G0028224.1 mouse_genomes_project 4 42182832 42294610 - MGP_BALBcJ_P0065539 Shb protein_coding protein_coding MGP_BALBcJ_T0065540.1 MGP_BALBcJ_G0028224.1 mouse_genomes_project 4 42204214 42257283 - Shb protein_coding processed_transcript MGP_BALBcJ_T0065541.1 MGP_BALBcJ_G0028224.1 mouse_genomes_project 4 42207010 42253842 - Shb protein_coding retained_intron MGP_BALBcJ_T0065542.1 MGP_BALBcJ_G0028224.1 mouse_genomes_project 4 42217686 42254234 - MGP_BALBcJ_P0065542 Shb protein_coding protein_coding MGP_BALBcJ_T0065543.1 MGP_BALBcJ_G0028224.1 mouse_genomes_project 4 42217877 42296750 - MGP_BALBcJ_P0065543 Shb protein_coding protein_coding MGP_BALBcJ_T0010596.1 MGP_BALBcJ_G0008721.1 mouse_genomes_project 4 115264244 115264304 - Mir7226 miRNA miRNA MGP_BALBcJ_T0065303.1 MGP_BALBcJ_G0028180.1 mouse_genomes_project 4 40155153 40157269 - MGP_BALBcJ_P0065303 Fam166b protein_coding protein_coding MGP_BALBcJ_T0065304.1 MGP_BALBcJ_G0028180.1 mouse_genomes_project 4 40155210 40157252 - MGP_BALBcJ_P0065304 Fam166b protein_coding protein_coding MGP_BALBcJ_T0065305.1 MGP_BALBcJ_G0028180.1 mouse_genomes_project 4 40155274 40156159 - MGP_BALBcJ_P0065305 Fam166b protein_coding protein_coding MGP_BALBcJ_T0065306.1 MGP_BALBcJ_G0028180.1 mouse_genomes_project 4 40155274 40157224 - MGP_BALBcJ_P0065306 Fam166b protein_coding protein_coding MGP_BALBcJ_T0065307.1 MGP_BALBcJ_G0028180.1 mouse_genomes_project 4 40155317 40157224 - MGP_BALBcJ_P0065307 Fam166b protein_coding protein_coding MGP_BALBcJ_T0065308.1 MGP_BALBcJ_G0028180.1 mouse_genomes_project 4 40155722 40157224 - MGP_BALBcJ_P0065308 Fam166b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067098.1 MGP_BALBcJ_G0028599.1 mouse_genomes_project 4 113093502 113122910 + MGP_BALBcJ_P0067098 Lrrc41 protein_coding protein_coding MGP_BALBcJ_T0067099.1 MGP_BALBcJ_G0028599.1 mouse_genomes_project 4 113093696 113108913 + Lrrc41 protein_coding processed_transcript MGP_BALBcJ_T0067100.1 MGP_BALBcJ_G0028599.1 mouse_genomes_project 4 113093778 113114396 + Lrrc41 protein_coding processed_transcript MGP_BALBcJ_T0067101.1 MGP_BALBcJ_G0028599.1 mouse_genomes_project 4 113095118 113114465 + Lrrc41 protein_coding processed_transcript MGP_BALBcJ_T0067102.1 MGP_BALBcJ_G0028599.1 mouse_genomes_project 4 113097657 113108911 + Lrrc41 protein_coding processed_transcript MGP_BALBcJ_T0067103.1 MGP_BALBcJ_G0028599.1 mouse_genomes_project 4 113115348 113119176 + Lrrc41 protein_coding processed_transcript MGP_BALBcJ_T0067564.1 MGP_BALBcJ_G0028703.1 mouse_genomes_project 4 118145301 118186234 - MGP_BALBcJ_P0067564 Zmpste24 protein_coding protein_coding MGP_BALBcJ_T0067565.1 MGP_BALBcJ_G0028703.1 mouse_genomes_project 4 118154325 118164334 - Zmpste24 protein_coding processed_transcript MGP_BALBcJ_T0067566.1 MGP_BALBcJ_G0028703.1 mouse_genomes_project 4 118169618 118183691 - MGP_BALBcJ_P0067566 Zmpste24 protein_coding protein_coding MGP_BALBcJ_T0066666.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104065585 104076846 + Cyb5rl protein_coding retained_intron MGP_BALBcJ_T0066667.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104065585 104084393 + MGP_BALBcJ_P0066667 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066668.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104065593 104086128 + MGP_BALBcJ_P0066668 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066669.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104065593 104069513 + MGP_BALBcJ_P0066669 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066670.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104065616 104086835 + MGP_BALBcJ_P0066670 Cyb5rl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066671.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104065621 104069529 + MGP_BALBcJ_P0066671 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066672.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104067202 104084393 + MGP_BALBcJ_P0066672 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066673.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104067240 104086558 + MGP_BALBcJ_P0066673 Cyb5rl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066674.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104068765 104083371 + MGP_BALBcJ_P0066674 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066675.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104069467 104082906 + MGP_BALBcJ_P0066675 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0066676.1 MGP_BALBcJ_G0028512.1 mouse_genomes_project 4 104079585 104086344 + MGP_BALBcJ_P0066676 Cyb5rl protein_coding protein_coding MGP_BALBcJ_T0065534.1 MGP_BALBcJ_G0028223.1 mouse_genomes_project 4 42149843 42165321 - MGP_BALBcJ_P0065534 Slc25a51 protein_coding protein_coding MGP_BALBcJ_T0065535.1 MGP_BALBcJ_G0028223.1 mouse_genomes_project 4 42149843 42155784 - MGP_BALBcJ_P0065535 Slc25a51 protein_coding protein_coding MGP_BALBcJ_T0065536.1 MGP_BALBcJ_G0028223.1 mouse_genomes_project 4 42158021 42165410 - Slc25a51 protein_coding processed_transcript MGP_BALBcJ_T0065537.1 MGP_BALBcJ_G0028223.1 mouse_genomes_project 4 42159975 42160914 - MGP_BALBcJ_P0065537 Slc25a51 protein_coding protein_coding MGP_BALBcJ_T0007903.1 MGP_BALBcJ_G0006457.1 mouse_genomes_project 4 111652436 111653080 - Gm28864 lincRNA lincRNA MGP_BALBcJ_T0014679.1 MGP_BALBcJ_G0012776.1 mouse_genomes_project 4 104678035 104678586 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065157.1 MGP_BALBcJ_G0028147.1 mouse_genomes_project 4 38569210 38569965 - MGP_BALBcJ_P0065157 Ccl27b protein_coding protein_coding MGP_BALBcJ_T0066264.1 MGP_BALBcJ_G0028410.1 mouse_genomes_project 4 85686853 85687911 - MGP_BALBcJ_P0066264 Ifnab protein_coding protein_coding MGP_BALBcJ_T0069435.1 MGP_BALBcJ_G0029141.1 mouse_genomes_project 4 149001591 149006305 + MGP_BALBcJ_P0069435 Uts2 protein_coding protein_coding MGP_BALBcJ_T0068705.1 MGP_BALBcJ_G0028962.1 mouse_genomes_project 4 134649219 134687319 - MGP_BALBcJ_P0068705 Cdc42 protein_coding protein_coding MGP_BALBcJ_T0068706.1 MGP_BALBcJ_G0028962.1 mouse_genomes_project 4 134651286 134687298 - MGP_BALBcJ_P0068706 Cdc42 protein_coding protein_coding MGP_BALBcJ_T0065406.1 MGP_BALBcJ_G0028197.1 mouse_genomes_project 4 40403138 40420010 + protein_coding processed_transcript MGP_BALBcJ_T0065407.1 MGP_BALBcJ_G0028197.1 mouse_genomes_project 4 40403202 40428050 + MGP_BALBcJ_P0065407 protein_coding protein_coding MGP_BALBcJ_T0065408.1 MGP_BALBcJ_G0028197.1 mouse_genomes_project 4 40403436 40419213 + MGP_BALBcJ_P0065408 protein_coding protein_coding MGP_BALBcJ_T0065409.1 MGP_BALBcJ_G0028197.1 mouse_genomes_project 4 40403497 40414889 + protein_coding processed_transcript MGP_BALBcJ_T0065410.1 MGP_BALBcJ_G0028197.1 mouse_genomes_project 4 40408036 40419802 + protein_coding processed_transcript MGP_BALBcJ_T0065411.1 MGP_BALBcJ_G0028197.1 mouse_genomes_project 4 40423224 40424031 + protein_coding processed_transcript MGP_BALBcJ_T0101110.1 MGP_BALBcJ_G0039146.1 mouse_genomes_project 4 34042124 34042249 + Gm22732 snoRNA snoRNA MGP_BALBcJ_T0066988.1 MGP_BALBcJ_G0028566.1 mouse_genomes_project 4 109591192 109606019 + MGP_BALBcJ_P0066988 Skint2 protein_coding protein_coding MGP_BALBcJ_T0066989.1 MGP_BALBcJ_G0028566.1 mouse_genomes_project 4 109591335 109625274 + MGP_BALBcJ_P0066989 Skint2 protein_coding protein_coding MGP_BALBcJ_T0066990.1 MGP_BALBcJ_G0028566.1 mouse_genomes_project 4 109591346 109620816 + Skint2 protein_coding processed_transcript MGP_BALBcJ_T0066991.1 MGP_BALBcJ_G0028566.1 mouse_genomes_project 4 109594616 109620816 + MGP_BALBcJ_P0066991 Skint2 protein_coding protein_coding MGP_BALBcJ_T0065047.1 MGP_BALBcJ_G0028123.1 mouse_genomes_project 4 37808883 37821109 - MGP_BALBcJ_P0065047 Aqp7 protein_coding protein_coding MGP_BALBcJ_T0065048.1 MGP_BALBcJ_G0028123.1 mouse_genomes_project 4 37808883 37823800 - MGP_BALBcJ_P0065048 Aqp7 protein_coding protein_coding MGP_BALBcJ_T0065049.1 MGP_BALBcJ_G0028123.1 mouse_genomes_project 4 37811057 37816869 - Aqp7 protein_coding processed_transcript MGP_BALBcJ_T0065050.1 MGP_BALBcJ_G0028123.1 mouse_genomes_project 4 37811299 37812473 - Aqp7 protein_coding processed_transcript MGP_BALBcJ_T0007860.1 MGP_BALBcJ_G0006425.1 mouse_genomes_project 4 86088796 86128135 + Gm12603 lincRNA lincRNA MGP_BALBcJ_T0007861.1 MGP_BALBcJ_G0006425.1 mouse_genomes_project 4 86102006 86128238 + Gm12603 lincRNA lincRNA MGP_BALBcJ_T0068667.1 MGP_BALBcJ_G0028949.1 mouse_genomes_project 4 133720181 133743115 + MGP_BALBcJ_P0068667 Htr1d protein_coding protein_coding MGP_BALBcJ_T0068668.1 MGP_BALBcJ_G0028949.1 mouse_genomes_project 4 133720183 133742477 + MGP_BALBcJ_P0068668 Htr1d protein_coding protein_coding MGP_BALBcJ_T0068669.1 MGP_BALBcJ_G0028949.1 mouse_genomes_project 4 133720187 133742477 + MGP_BALBcJ_P0068669 Htr1d protein_coding protein_coding MGP_BALBcJ_T0068670.1 MGP_BALBcJ_G0028949.1 mouse_genomes_project 4 133721233 133740682 + Htr1d protein_coding processed_transcript MGP_BALBcJ_T0004523.1 MGP_BALBcJ_G0003930.1 mouse_genomes_project 4 126765778 126785312 - Gm12979 antisense antisense MGP_BALBcJ_T0007951.1 MGP_BALBcJ_G0006490.1 mouse_genomes_project 4 128640146 128658798 + Gm831 lincRNA lincRNA MGP_BALBcJ_T0007954.1 MGP_BALBcJ_G0006492.1 mouse_genomes_project 4 128851073 128867434 - Gm16080 lincRNA lincRNA MGP_BALBcJ_T0007946.1 MGP_BALBcJ_G0006486.1 mouse_genomes_project 4 127923739 127928166 - Gm26516 lincRNA lincRNA MGP_BALBcJ_T0068689.1 MGP_BALBcJ_G0028954.1 mouse_genomes_project 4 133931337 133948755 + MGP_BALBcJ_P0068689 Lactbl1 protein_coding protein_coding MGP_BALBcJ_T0007870.1 MGP_BALBcJ_G0006433.1 mouse_genomes_project 4 92058195 92060533 - 4930551L18Rik lincRNA lincRNA MGP_BALBcJ_T0014716.1 MGP_BALBcJ_G0012813.1 mouse_genomes_project 4 116416597 116417654 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004432.1 MGP_BALBcJ_G0003862.1 mouse_genomes_project 4 41718572 41726537 - Gm12679 antisense antisense MGP_BALBcJ_T0014455.1 MGP_BALBcJ_G0012552.1 mouse_genomes_project 4 24659119 24660142 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010632.1 MGP_BALBcJ_G0008757.1 mouse_genomes_project 4 140629851 140629914 - Mir7021 miRNA miRNA MGP_BALBcJ_T0014661.1 MGP_BALBcJ_G0012758.1 mouse_genomes_project 4 98368978 98430818 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014730.1 MGP_BALBcJ_G0012827.1 mouse_genomes_project 4 118735630 118735962 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099835.1 MGP_BALBcJ_G0037871.1 mouse_genomes_project 4 54581441 54581545 + Gm24277 snRNA snRNA MGP_BALBcJ_T0014769.1 MGP_BALBcJ_G0012866.1 mouse_genomes_project 4 133030217 133030695 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065464.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41269400 41455289 - MGP_BALBcJ_P0065464 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065465.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41275788 41455220 - MGP_BALBcJ_P0065465 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065466.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41275788 41455220 - MGP_BALBcJ_P0065466 Pax5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065467.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41275788 41455220 - MGP_BALBcJ_P0065467 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065468.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41275788 41455220 - MGP_BALBcJ_P0065468 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065469.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41275788 41455220 - MGP_BALBcJ_P0065469 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065470.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065470 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065471.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065471 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065472.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065472 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065473.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065473 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065474.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065474 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065475.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065475 Pax5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065476.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276140 41455210 - MGP_BALBcJ_P0065476 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065477.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41276147 41390033 - MGP_BALBcJ_P0065477 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065478.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41313792 41428621 - Pax5 protein_coding processed_transcript MGP_BALBcJ_T0065479.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41424245 41448808 - MGP_BALBcJ_P0065479 Pax5 protein_coding protein_coding MGP_BALBcJ_T0065480.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41424259 41448215 - Pax5 protein_coding processed_transcript MGP_BALBcJ_T0065481.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41424259 41448215 - Pax5 protein_coding processed_transcript MGP_BALBcJ_T0065482.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41424259 41448215 - Pax5 protein_coding processed_transcript MGP_BALBcJ_T0065483.1 MGP_BALBcJ_G0028212.1 mouse_genomes_project 4 41424259 41448215 - MGP_BALBcJ_P0065483 Pax5 protein_coding protein_coding MGP_BALBcJ_T0066859.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106012484 106082205 + MGP_BALBcJ_P0066859 Nrd1 protein_coding protein_coding MGP_BALBcJ_T0066860.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106012484 106082205 + MGP_BALBcJ_P0066860 Nrd1 protein_coding protein_coding MGP_BALBcJ_T0066861.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106012599 106081590 + MGP_BALBcJ_P0066861 Nrd1 protein_coding protein_coding MGP_BALBcJ_T0066862.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106030825 106065085 + MGP_BALBcJ_P0066862 Nrd1 protein_coding protein_coding MGP_BALBcJ_T0066863.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106044679 106053219 + Nrd1 protein_coding retained_intron MGP_BALBcJ_T0066864.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106052913 106063851 + Nrd1 protein_coding retained_intron MGP_BALBcJ_T0066865.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106060190 106064547 + Nrd1 protein_coding retained_intron MGP_BALBcJ_T0066866.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106060635 106081904 + Nrd1 protein_coding processed_transcript MGP_BALBcJ_T0066867.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106066715 106071327 + Nrd1 protein_coding processed_transcript MGP_BALBcJ_T0066868.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106075382 106077305 + Nrd1 protein_coding retained_intron MGP_BALBcJ_T0066869.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106079363 106080230 + Nrd1 protein_coding retained_intron MGP_BALBcJ_T0066870.1 MGP_BALBcJ_G0028548.1 mouse_genomes_project 4 106079420 106081109 + Nrd1 protein_coding retained_intron MGP_BALBcJ_T0014439.1 MGP_BALBcJ_G0012536.1 mouse_genomes_project 4 20747785 20748988 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007922.1 MGP_BALBcJ_G0006472.1 mouse_genomes_project 4 122426373 122439506 + 1700041M05Rik lincRNA lincRNA MGP_BALBcJ_T0065575.1 MGP_BALBcJ_G0028232.1 mouse_genomes_project 4 42908951 42942685 + MGP_BALBcJ_P0065575 Ncbp1 protein_coding protein_coding MGP_BALBcJ_T0065577.1 MGP_BALBcJ_G0028232.1 mouse_genomes_project 4 42928188 42930382 + Ncbp1 protein_coding processed_transcript MGP_BALBcJ_T0065578.1 MGP_BALBcJ_G0028232.1 mouse_genomes_project 4 42935479 42942261 + Ncbp1 protein_coding processed_transcript MGP_BALBcJ_T0068647.1 MGP_BALBcJ_G0028945.1 mouse_genomes_project 4 133501493 133540903 + MGP_BALBcJ_P0068647 Asap3 protein_coding protein_coding MGP_BALBcJ_T0014414.1 MGP_BALBcJ_G0012511.1 mouse_genomes_project 4 12866993 12868210 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069275.1 MGP_BALBcJ_G0029112.1 mouse_genomes_project 4 146747634 146904549 + MGP_BALBcJ_P0069275 Casz1 protein_coding protein_coding MGP_BALBcJ_T0069276.1 MGP_BALBcJ_G0029112.1 mouse_genomes_project 4 146747634 146894781 + MGP_BALBcJ_P0069276 Casz1 protein_coding protein_coding MGP_BALBcJ_T0069277.1 MGP_BALBcJ_G0029112.1 mouse_genomes_project 4 146747670 146783356 + Casz1 protein_coding processed_transcript MGP_BALBcJ_T0069278.1 MGP_BALBcJ_G0029112.1 mouse_genomes_project 4 146838456 146841004 + Casz1 protein_coding processed_transcript MGP_BALBcJ_T0069279.1 MGP_BALBcJ_G0029112.1 mouse_genomes_project 4 146850224 146882534 + MGP_BALBcJ_P0069279 Casz1 protein_coding protein_coding MGP_BALBcJ_T0069280.1 MGP_BALBcJ_G0029112.1 mouse_genomes_project 4 146882751 146890150 + MGP_BALBcJ_P0069280 Casz1 protein_coding protein_coding MGP_BALBcJ_T0017991.1 MGP_BALBcJ_G0015472.1 mouse_genomes_project 4 8436624 8464297 + 1700123M08Rik processed_transcript processed_transcript MGP_BALBcJ_T0017992.1 MGP_BALBcJ_G0015472.1 mouse_genomes_project 4 8436633 8464016 + 1700123M08Rik processed_transcript processed_transcript MGP_BALBcJ_T0017993.1 MGP_BALBcJ_G0015472.1 mouse_genomes_project 4 8450220 8451712 + 1700123M08Rik processed_transcript processed_transcript MGP_BALBcJ_T0004551.1 MGP_BALBcJ_G0003953.1 mouse_genomes_project 4 138719447 138723327 - Gm13055 antisense antisense MGP_BALBcJ_T0068281.1 MGP_BALBcJ_G0028860.1 mouse_genomes_project 4 129916744 129941916 - MGP_BALBcJ_P0068281 Smpdl3b protein_coding protein_coding MGP_BALBcJ_T0065493.1 MGP_BALBcJ_G0028214.1 mouse_genomes_project 4 41729612 41738952 + MGP_BALBcJ_P0065493 Grhpr protein_coding protein_coding MGP_BALBcJ_T0065494.1 MGP_BALBcJ_G0028214.1 mouse_genomes_project 4 41729620 41732161 + MGP_BALBcJ_P0065494 Grhpr protein_coding protein_coding MGP_BALBcJ_T0065495.1 MGP_BALBcJ_G0028214.1 mouse_genomes_project 4 41729649 41737228 + MGP_BALBcJ_P0065495 Grhpr protein_coding protein_coding MGP_BALBcJ_T0065496.1 MGP_BALBcJ_G0028214.1 mouse_genomes_project 4 41729650 41735545 + Grhpr protein_coding processed_transcript MGP_BALBcJ_T0065497.1 MGP_BALBcJ_G0028214.1 mouse_genomes_project 4 41729678 41735466 + MGP_BALBcJ_P0065497 Grhpr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065498.1 MGP_BALBcJ_G0028214.1 mouse_genomes_project 4 41729717 41734608 + Grhpr protein_coding processed_transcript MGP_BALBcJ_T0004518.1 MGP_BALBcJ_G0003926.1 mouse_genomes_project 4 123352377 123354129 + Gm12946 antisense antisense MGP_BALBcJ_T0067410.1 MGP_BALBcJ_G0028664.1 mouse_genomes_project 4 115929824 115951660 + MGP_BALBcJ_P0067410 protein_coding protein_coding MGP_BALBcJ_T0066999.1 MGP_BALBcJ_G0028571.1 mouse_genomes_project 4 111802453 111839405 + MGP_BALBcJ_P0066999 Gm12830 protein_coding protein_coding MGP_BALBcJ_T0068707.1 MGP_BALBcJ_G0028963.1 mouse_genomes_project 4 134757997 134764482 - MGP_BALBcJ_P0068707 Cela3a protein_coding protein_coding MGP_BALBcJ_T0098371.1 MGP_BALBcJ_G0036425.1 mouse_genomes_project 4 95730667 95730755 + pseudogene pseudogene MGP_BALBcJ_T0067827.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124083365 124192072 - MGP_BALBcJ_P0067827 Zmym4 protein_coding protein_coding MGP_BALBcJ_T0067828.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124090098 124091909 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0067829.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124127747 124138222 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0067830.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124133483 124138110 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0067831.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124137939 124146529 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0067832.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124146167 124148891 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0067833.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124148889 124192037 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0067834.1 MGP_BALBcJ_G0028771.1 mouse_genomes_project 4 124148922 124192061 - Zmym4 protein_coding processed_transcript MGP_BALBcJ_T0007932.1 MGP_BALBcJ_G0006477.1 mouse_genomes_project 4 125043080 125044616 - 1700112K13Rik lincRNA lincRNA MGP_BALBcJ_T0067514.1 MGP_BALBcJ_G0028689.1 mouse_genomes_project 4 117241131 117247586 + MGP_BALBcJ_P0067514 Edn2 protein_coding protein_coding MGP_BALBcJ_T0101167.1 MGP_BALBcJ_G0039203.1 mouse_genomes_project 4 127898522 127898595 + Snord85 snoRNA snoRNA MGP_BALBcJ_T0008003.1 MGP_BALBcJ_G0006531.1 mouse_genomes_project 4 150734169 150737145 + Gm833 lincRNA lincRNA MGP_BALBcJ_T0014779.1 MGP_BALBcJ_G0012876.1 mouse_genomes_project 4 136543300 136543910 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065057.1 MGP_BALBcJ_G0028126.1 mouse_genomes_project 4 37911403 37971103 + MGP_BALBcJ_P0065057 Ube2r2 protein_coding protein_coding MGP_BALBcJ_T0065058.1 MGP_BALBcJ_G0028126.1 mouse_genomes_project 4 37959684 37968546 + Ube2r2 protein_coding retained_intron MGP_BALBcJ_T0065059.1 MGP_BALBcJ_G0028126.1 mouse_genomes_project 4 37966614 37968759 + Ube2r2 protein_coding retained_intron MGP_BALBcJ_T0068925.1 MGP_BALBcJ_G0029013.1 mouse_genomes_project 4 138233889 138259169 - MGP_BALBcJ_P0068925 Padi3 protein_coding protein_coding MGP_BALBcJ_T0068926.1 MGP_BALBcJ_G0029013.1 mouse_genomes_project 4 138233893 138252518 - MGP_BALBcJ_P0068926 Padi3 protein_coding protein_coding MGP_BALBcJ_T0067043.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112759815 112796348 + MGP_BALBcJ_P0067043 Efcab14 protein_coding protein_coding MGP_BALBcJ_T0067044.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112759850 112780346 + Efcab14 protein_coding processed_transcript MGP_BALBcJ_T0067045.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112759850 112791397 + MGP_BALBcJ_P0067045 Efcab14 protein_coding protein_coding MGP_BALBcJ_T0067046.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112759851 112776005 + Efcab14 protein_coding processed_transcript MGP_BALBcJ_T0067047.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112760144 112799262 + MGP_BALBcJ_P0067047 Efcab14 protein_coding protein_coding MGP_BALBcJ_T0067048.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112760514 112795991 + MGP_BALBcJ_P0067048 Efcab14 protein_coding protein_coding MGP_BALBcJ_T0067049.1 MGP_BALBcJ_G0028588.1 mouse_genomes_project 4 112789174 112797101 + Efcab14 protein_coding processed_transcript MGP_BALBcJ_T0098944.1 MGP_BALBcJ_G0036991.1 mouse_genomes_project 4 92119899 92126224 + Gm28096 sense_intronic sense_intronic MGP_BALBcJ_T0014601.1 MGP_BALBcJ_G0012698.1 mouse_genomes_project 4 76983651 76984152 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067933.1 MGP_BALBcJ_G0028796.1 mouse_genomes_project 4 126389234 126396821 + MGP_BALBcJ_P0067933 Fndc5 protein_coding protein_coding MGP_BALBcJ_T0066318.1 MGP_BALBcJ_G0028435.1 mouse_genomes_project 4 91876874 91891397 - MGP_BALBcJ_P0066318 Eqtn protein_coding protein_coding MGP_BALBcJ_T0066319.1 MGP_BALBcJ_G0028435.1 mouse_genomes_project 4 91877038 91891348 - MGP_BALBcJ_P0066319 Eqtn protein_coding protein_coding MGP_BALBcJ_T0069227.1 MGP_BALBcJ_G0029106.1 mouse_genomes_project 4 146431717 146437053 - MGP_BALBcJ_P0069227 Angptl7 protein_coding protein_coding MGP_BALBcJ_T0101112.1 MGP_BALBcJ_G0039148.1 mouse_genomes_project 4 37213510 37213605 - Gm23338 snoRNA snoRNA MGP_BALBcJ_T0067221.1 MGP_BALBcJ_G0028622.1 mouse_genomes_project 4 114028741 114039126 + MGP_BALBcJ_P0067221 Hectd3 protein_coding protein_coding MGP_BALBcJ_T0067222.1 MGP_BALBcJ_G0028622.1 mouse_genomes_project 4 114032144 114034157 + Hectd3 protein_coding retained_intron MGP_BALBcJ_T0067223.1 MGP_BALBcJ_G0028622.1 mouse_genomes_project 4 114036705 114037303 + Hectd3 protein_coding retained_intron MGP_BALBcJ_T0007781.1 MGP_BALBcJ_G0006356.1 mouse_genomes_project 4 10391477 10465976 - Gm11823 lincRNA lincRNA MGP_BALBcJ_T0068565.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132638646 132669577 - MGP_BALBcJ_P0068565 Ncmap protein_coding protein_coding MGP_BALBcJ_T0068566.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132638646 132655474 - MGP_BALBcJ_P0068566 Ncmap protein_coding protein_coding MGP_BALBcJ_T0068567.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132638646 132669546 - MGP_BALBcJ_P0068567 Ncmap protein_coding protein_coding MGP_BALBcJ_T0068568.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132638647 132655491 - MGP_BALBcJ_P0068568 Ncmap protein_coding protein_coding MGP_BALBcJ_T0068569.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132639297 132655464 - MGP_BALBcJ_P0068569 Ncmap protein_coding protein_coding MGP_BALBcJ_T0068570.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132639587 132644507 - Ncmap protein_coding processed_transcript MGP_BALBcJ_T0068571.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132639722 132655491 - MGP_BALBcJ_P0068571 Ncmap protein_coding protein_coding MGP_BALBcJ_T0068572.1 MGP_BALBcJ_G0028925.1 mouse_genomes_project 4 132641755 132669583 - MGP_BALBcJ_P0068572 Ncmap protein_coding protein_coding MGP_BALBcJ_T0014436.1 MGP_BALBcJ_G0012533.1 mouse_genomes_project 4 20000172 20001373 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101157.1 MGP_BALBcJ_G0039193.1 mouse_genomes_project 4 114195503 114195607 - Gm26330 snoRNA snoRNA MGP_BALBcJ_T0101182.1 MGP_BALBcJ_G0039218.1 mouse_genomes_project 4 151943099 151943231 + Gm25880 snoRNA snoRNA MGP_BALBcJ_T0065342.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40236338 40242789 + MGP_BALBcJ_P0065342 Car9 protein_coding protein_coding MGP_BALBcJ_T0065343.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40236357 40243408 + Car9 protein_coding processed_transcript MGP_BALBcJ_T0065344.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40236645 40242737 + MGP_BALBcJ_P0065344 Car9 protein_coding protein_coding MGP_BALBcJ_T0065345.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40237220 40238318 + Car9 protein_coding processed_transcript MGP_BALBcJ_T0065346.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40237886 40238379 + Car9 protein_coding processed_transcript MGP_BALBcJ_T0065347.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40238280 40242134 + Car9 protein_coding processed_transcript MGP_BALBcJ_T0065348.1 MGP_BALBcJ_G0028186.1 mouse_genomes_project 4 40241810 40242621 + Car9 protein_coding processed_transcript MGP_BALBcJ_T0101100.1 MGP_BALBcJ_G0039136.1 mouse_genomes_project 4 4330951 4331083 + Gm23860 snoRNA snoRNA MGP_BALBcJ_T0069826.1 MGP_BALBcJ_G0029211.1 mouse_genomes_project 4 153903979 153916010 + MGP_BALBcJ_P0069826 Ccnl2 protein_coding protein_coding MGP_BALBcJ_T0069827.1 MGP_BALBcJ_G0029211.1 mouse_genomes_project 4 153903991 153916010 + Ccnl2 protein_coding retained_intron MGP_BALBcJ_T0069828.1 MGP_BALBcJ_G0029211.1 mouse_genomes_project 4 153904009 153913289 + Ccnl2 protein_coding retained_intron MGP_BALBcJ_T0069829.1 MGP_BALBcJ_G0029211.1 mouse_genomes_project 4 153904268 153907337 + Ccnl2 protein_coding retained_intron MGP_BALBcJ_T0069830.1 MGP_BALBcJ_G0029211.1 mouse_genomes_project 4 153904975 153915770 + MGP_BALBcJ_P0069830 Ccnl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069831.1 MGP_BALBcJ_G0029211.1 mouse_genomes_project 4 153911760 153915820 + MGP_BALBcJ_P0069831 Ccnl2 protein_coding unknown_likely_coding MGP_BALBcJ_T0011555.1 MGP_BALBcJ_G0009680.1 mouse_genomes_project 4 98521963 98522237 + Gm22533 misc_RNA misc_RNA MGP_BALBcJ_T0004448.1 MGP_BALBcJ_G0003876.1 mouse_genomes_project 4 71170219 71171610 - A230083N12Rik antisense antisense MGP_BALBcJ_T0001429.1 MGP_BALBcJ_G0001350.1 mouse_genomes_project 4 150027094 150029955 - TEC TEC MGP_BALBcJ_T0069601.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152090727 152095874 - MGP_BALBcJ_P0069601 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069602.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152090845 152096170 - MGP_BALBcJ_P0069602 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069603.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152090845 152096224 - MGP_BALBcJ_P0069603 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069604.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152091713 152096488 - MGP_BALBcJ_P0069604 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069605.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152091718 152096410 - MGP_BALBcJ_P0069605 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069606.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093567 152096194 - MGP_BALBcJ_P0069606 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069607.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093567 152096125 - MGP_BALBcJ_P0069607 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069608.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093567 152095874 - MGP_BALBcJ_P0069608 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069609.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093568 152094613 - MGP_BALBcJ_P0069609 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069610.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093568 152096408 - MGP_BALBcJ_P0069610 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069611.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093838 152096295 - MGP_BALBcJ_P0069611 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069612.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093956 152095921 - MGP_BALBcJ_P0069612 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069613.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152093981 152094581 - MGP_BALBcJ_P0069613 Smim1 protein_coding protein_coding MGP_BALBcJ_T0069614.1 MGP_BALBcJ_G0029170.1 mouse_genomes_project 4 152095563 152096170 - Smim1 protein_coding processed_transcript MGP_BALBcJ_T0065309.1 MGP_BALBcJ_G0028181.1 mouse_genomes_project 4 40170111 40176202 + MGP_BALBcJ_P0065309 Tesk1 protein_coding protein_coding MGP_BALBcJ_T0065310.1 MGP_BALBcJ_G0028181.1 mouse_genomes_project 4 40171457 40175932 + MGP_BALBcJ_P0065310 Tesk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065311.1 MGP_BALBcJ_G0028181.1 mouse_genomes_project 4 40172711 40173517 + Tesk1 protein_coding retained_intron MGP_BALBcJ_T0065312.1 MGP_BALBcJ_G0028181.1 mouse_genomes_project 4 40172844 40173954 + Tesk1 protein_coding retained_intron MGP_BALBcJ_T0065313.1 MGP_BALBcJ_G0028181.1 mouse_genomes_project 4 40173086 40174148 + Tesk1 protein_coding retained_intron MGP_BALBcJ_T0064923.1 MGP_BALBcJ_G0028093.1 mouse_genomes_project 4 30618633 30629736 + Cnr1 protein_coding processed_transcript MGP_BALBcJ_T0064924.1 MGP_BALBcJ_G0028093.1 mouse_genomes_project 4 30618672 30643242 + MGP_BALBcJ_P0064924 Cnr1 protein_coding protein_coding MGP_BALBcJ_T0064925.1 MGP_BALBcJ_G0028093.1 mouse_genomes_project 4 30620242 30643230 + MGP_BALBcJ_P0064925 Cnr1 protein_coding protein_coding MGP_BALBcJ_T0068969.1 MGP_BALBcJ_G0029022.1 mouse_genomes_project 4 138564027 138592251 - Szrd1 protein_coding processed_transcript MGP_BALBcJ_T0068970.1 MGP_BALBcJ_G0029022.1 mouse_genomes_project 4 138564027 138592251 - Szrd1 protein_coding processed_transcript MGP_BALBcJ_T0068971.1 MGP_BALBcJ_G0029022.1 mouse_genomes_project 4 138564027 138592242 - MGP_BALBcJ_P0068971 Szrd1 protein_coding protein_coding MGP_BALBcJ_T0068972.1 MGP_BALBcJ_G0029022.1 mouse_genomes_project 4 138564027 138592203 - MGP_BALBcJ_P0068972 Szrd1 protein_coding protein_coding MGP_BALBcJ_T0068973.1 MGP_BALBcJ_G0029022.1 mouse_genomes_project 4 138567593 138592216 - Szrd1 protein_coding processed_transcript MGP_BALBcJ_T0067230.1 MGP_BALBcJ_G0028624.1 mouse_genomes_project 4 114132890 114152022 + MGP_BALBcJ_P0067230 Ptch2 protein_coding protein_coding MGP_BALBcJ_T0067231.1 MGP_BALBcJ_G0028624.1 mouse_genomes_project 4 114132911 114152022 + MGP_BALBcJ_P0067231 Ptch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067232.1 MGP_BALBcJ_G0028624.1 mouse_genomes_project 4 114141713 114143131 + Ptch2 protein_coding retained_intron MGP_BALBcJ_T0067233.1 MGP_BALBcJ_G0028624.1 mouse_genomes_project 4 114142040 114145346 + MGP_BALBcJ_P0067233 Ptch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067234.1 MGP_BALBcJ_G0028624.1 mouse_genomes_project 4 114147065 114147919 + Ptch2 protein_coding retained_intron MGP_BALBcJ_T0067235.1 MGP_BALBcJ_G0028624.1 mouse_genomes_project 4 114150062 114152740 + Ptch2 protein_coding retained_intron MGP_BALBcJ_T0068708.1 MGP_BALBcJ_G0028964.1 mouse_genomes_project 4 134777315 134785888 - MGP_BALBcJ_P0068708 Cela3b protein_coding protein_coding MGP_BALBcJ_T0068709.1 MGP_BALBcJ_G0028964.1 mouse_genomes_project 4 134777324 134779106 - Cela3b protein_coding processed_transcript MGP_BALBcJ_T0101123.1 MGP_BALBcJ_G0039159.1 mouse_genomes_project 4 50727536 50727661 + Gm23745 snoRNA snoRNA MGP_BALBcJ_T0065802.1 MGP_BALBcJ_G0028297.1 mouse_genomes_project 4 54250459 54530769 + MGP_BALBcJ_P0065802 Palm2 protein_coding protein_coding MGP_BALBcJ_T0065803.1 MGP_BALBcJ_G0028297.1 mouse_genomes_project 4 54385533 54530555 + MGP_BALBcJ_P0065803 Palm2 protein_coding protein_coding MGP_BALBcJ_T0065805.1 MGP_BALBcJ_G0028297.1 mouse_genomes_project 4 54385694 54528982 + MGP_BALBcJ_P0065805 Palm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065808.1 MGP_BALBcJ_G0028297.1 mouse_genomes_project 4 54456576 54528242 + Palm2 protein_coding retained_intron MGP_BALBcJ_T0014550.1 MGP_BALBcJ_G0012647.1 mouse_genomes_project 4 54228049 54228535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101120.1 MGP_BALBcJ_G0039156.1 mouse_genomes_project 4 45703038 45703163 + Gm23746 snoRNA snoRNA MGP_BALBcJ_T0007779.1 MGP_BALBcJ_G0006354.1 mouse_genomes_project 4 8795153 8839993 + Gm11846 lincRNA lincRNA MGP_BALBcJ_T0014390.1 MGP_BALBcJ_G0012487.1 mouse_genomes_project 4 7583361 7583922 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010590.1 MGP_BALBcJ_G0008715.1 mouse_genomes_project 4 96675960 96676049 + Gm23366 miRNA miRNA MGP_BALBcJ_T0068429.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131340282 131364871 + MGP_BALBcJ_P0068429 Ubxn11 protein_coding protein_coding MGP_BALBcJ_T0068430.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131340287 131363279 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068431.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131340320 131363888 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068432.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131340332 131364889 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068433.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131340335 131354264 + MGP_BALBcJ_P0068433 Ubxn11 protein_coding protein_coding MGP_BALBcJ_T0068434.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131340336 131347907 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068435.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131346061 131351109 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068436.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131350689 131361712 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068437.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131361582 131364888 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0068438.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131362164 131364614 + MGP_BALBcJ_P0068438 Ubxn11 protein_coding protein_coding MGP_BALBcJ_T0068439.1 MGP_BALBcJ_G0028894.1 mouse_genomes_project 4 131364040 131364889 + Ubxn11 protein_coding processed_transcript MGP_BALBcJ_T0066280.1 MGP_BALBcJ_G0028424.1 mouse_genomes_project 4 86710238 86724034 + Dmrta1 protein_coding processed_transcript MGP_BALBcJ_T0066281.1 MGP_BALBcJ_G0028424.1 mouse_genomes_project 4 86720342 86726895 + MGP_BALBcJ_P0066281 Dmrta1 protein_coding protein_coding MGP_BALBcJ_T0066409.1 MGP_BALBcJ_G0028454.1 mouse_genomes_project 4 95710752 95717763 + MGP_BALBcJ_P0066409 L1td1 protein_coding protein_coding MGP_BALBcJ_T0066410.1 MGP_BALBcJ_G0028454.1 mouse_genomes_project 4 95710766 95722554 + MGP_BALBcJ_P0066410 L1td1 protein_coding protein_coding MGP_BALBcJ_T0066411.1 MGP_BALBcJ_G0028454.1 mouse_genomes_project 4 95710811 95717679 + MGP_BALBcJ_P0066411 L1td1 protein_coding protein_coding MGP_BALBcJ_T0066412.1 MGP_BALBcJ_G0028454.1 mouse_genomes_project 4 95717321 95722190 + MGP_BALBcJ_P0066412 L1td1 protein_coding protein_coding MGP_BALBcJ_T0068895.1 MGP_BALBcJ_G0029005.1 mouse_genomes_project 4 137054018 137071270 + MGP_BALBcJ_P0068895 Tas1r2 protein_coding protein_coding MGP_BALBcJ_T0068896.1 MGP_BALBcJ_G0029005.1 mouse_genomes_project 4 137054029 137070850 + MGP_BALBcJ_P0068896 Tas1r2 protein_coding protein_coding MGP_BALBcJ_T0067538.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117844052 117903363 - MGP_BALBcJ_P0067538 Nfyc protein_coding protein_coding MGP_BALBcJ_T0067539.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117844052 117921219 - MGP_BALBcJ_P0067539 Nfyc protein_coding protein_coding MGP_BALBcJ_T0067540.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117844052 117913350 - MGP_BALBcJ_P0067540 Nfyc protein_coding protein_coding MGP_BALBcJ_T0067541.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117844566 117848788 - Nfyc protein_coding processed_transcript MGP_BALBcJ_T0067542.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117844809 117852020 - Nfyc protein_coding processed_transcript MGP_BALBcJ_T0067543.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117848277 117854804 - Nfyc protein_coding processed_transcript MGP_BALBcJ_T0067544.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117851843 117913328 - MGP_BALBcJ_P0067544 Nfyc protein_coding protein_coding MGP_BALBcJ_T0067545.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117855465 117913340 - MGP_BALBcJ_P0067545 Nfyc protein_coding protein_coding MGP_BALBcJ_T0067546.1 MGP_BALBcJ_G0028697.1 mouse_genomes_project 4 117866611 117913351 - MGP_BALBcJ_P0067546 Nfyc protein_coding protein_coding MGP_BALBcJ_T0007991.1 MGP_BALBcJ_G0006519.1 mouse_genomes_project 4 138807657 138810697 + Gm13074 lincRNA lincRNA MGP_BALBcJ_T0010635.1 MGP_BALBcJ_G0008760.1 mouse_genomes_project 4 147615273 147615337 - Mir7023 miRNA miRNA MGP_BALBcJ_T0067903.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126180306 126215999 - MGP_BALBcJ_P0067903 Azin2 protein_coding protein_coding MGP_BALBcJ_T0067904.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126182095 126216007 - MGP_BALBcJ_P0067904 Azin2 protein_coding protein_coding MGP_BALBcJ_T0067905.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126182095 126216018 - MGP_BALBcJ_P0067905 Azin2 protein_coding protein_coding MGP_BALBcJ_T0067906.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126199112 126216018 - Azin2 protein_coding retained_intron MGP_BALBcJ_T0067907.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126199554 126214977 - MGP_BALBcJ_P0067907 Azin2 protein_coding protein_coding MGP_BALBcJ_T0067908.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126200652 126216021 - Azin2 protein_coding retained_intron MGP_BALBcJ_T0067909.1 MGP_BALBcJ_G0028791.1 mouse_genomes_project 4 126214283 126216007 - Azin2 protein_coding retained_intron MGP_BALBcJ_T0014470.1 MGP_BALBcJ_G0012567.1 mouse_genomes_project 4 28843419 28844363 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010560.1 MGP_BALBcJ_G0008685.1 mouse_genomes_project 4 12611802 12611914 - Gm22690 miRNA miRNA MGP_BALBcJ_T0007915.1 MGP_BALBcJ_G0006469.1 mouse_genomes_project 4 121497442 121503581 - 4933435F18Rik lincRNA lincRNA MGP_BALBcJ_T0007916.1 MGP_BALBcJ_G0006469.1 mouse_genomes_project 4 121502478 121503540 - 4933435F18Rik lincRNA lincRNA MGP_BALBcJ_T0014456.1 MGP_BALBcJ_G0012553.1 mouse_genomes_project 4 24946288 24947295 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067867.1 MGP_BALBcJ_G0028782.1 mouse_genomes_project 4 125159378 125206280 - MGP_BALBcJ_P0067867 CK137956 protein_coding protein_coding MGP_BALBcJ_T0007784.1 MGP_BALBcJ_G0006359.1 mouse_genomes_project 4 16248148 16251303 - Gm12354 lincRNA lincRNA MGP_BALBcJ_T0007785.1 MGP_BALBcJ_G0006359.1 mouse_genomes_project 4 16248148 16251616 - Gm12354 lincRNA lincRNA MGP_BALBcJ_T0069085.1 MGP_BALBcJ_G0029052.1 mouse_genomes_project 4 140899086 140904819 + MGP_BALBcJ_P0069085 Pramel1 protein_coding protein_coding MGP_BALBcJ_T0065433.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40775991 40827056 - MGP_BALBcJ_P0065433 Gne protein_coding protein_coding MGP_BALBcJ_T0065434.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40778726 40797237 - MGP_BALBcJ_P0065434 Gne protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065435.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40778742 40813622 - MGP_BALBcJ_P0065435 Gne protein_coding protein_coding MGP_BALBcJ_T0065436.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40778746 40807809 - MGP_BALBcJ_P0065436 Gne protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065437.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40778874 40807849 - MGP_BALBcJ_P0065437 Gne protein_coding protein_coding MGP_BALBcJ_T0065438.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40787892 40813468 - MGP_BALBcJ_P0065438 Gne protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065439.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40794814 40807950 - MGP_BALBcJ_P0065439 Gne protein_coding protein_coding MGP_BALBcJ_T0065440.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40797244 40805295 - Gne protein_coding retained_intron MGP_BALBcJ_T0065441.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40801639 40827046 - Gne protein_coding retained_intron MGP_BALBcJ_T0065442.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40801807 40826802 - MGP_BALBcJ_P0065442 Gne protein_coding protein_coding MGP_BALBcJ_T0065443.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40801911 40813580 - Gne protein_coding processed_transcript MGP_BALBcJ_T0065444.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40801930 40813446 - MGP_BALBcJ_P0065444 Gne protein_coding protein_coding MGP_BALBcJ_T0065445.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40802042 40813861 - MGP_BALBcJ_P0065445 Gne protein_coding protein_coding MGP_BALBcJ_T0065446.1 MGP_BALBcJ_G0028209.1 mouse_genomes_project 4 40802051 40813862 - MGP_BALBcJ_P0065446 Gne protein_coding protein_coding MGP_BALBcJ_T0069778.1 MGP_BALBcJ_G0029199.1 mouse_genomes_project 4 153707363 153738456 - MGP_BALBcJ_P0069778 Gm10563 protein_coding protein_coding MGP_BALBcJ_T0064766.1 MGP_BALBcJ_G0028057.1 mouse_genomes_project 4 16649982 17306756 - MGP_BALBcJ_P0064766 Nkain3 protein_coding protein_coding MGP_BALBcJ_T0064767.1 MGP_BALBcJ_G0028057.1 mouse_genomes_project 4 16777782 17307043 - MGP_BALBcJ_P0064767 Nkain3 protein_coding protein_coding MGP_BALBcJ_T0014570.1 MGP_BALBcJ_G0012667.1 mouse_genomes_project 4 66907440 66908551 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0067636.1 MGP_BALBcJ_G0028724.1 mouse_genomes_project 4 120867948 120871543 - MGP_BALBcJ_P0067636 Ndufs5 protein_coding protein_coding MGP_BALBcJ_T0067637.1 MGP_BALBcJ_G0028724.1 mouse_genomes_project 4 120867948 120873415 - MGP_BALBcJ_P0067637 Ndufs5 protein_coding protein_coding MGP_BALBcJ_T0067638.1 MGP_BALBcJ_G0028724.1 mouse_genomes_project 4 120867948 120873399 - MGP_BALBcJ_P0067638 Ndufs5 protein_coding protein_coding MGP_BALBcJ_T0067639.1 MGP_BALBcJ_G0028724.1 mouse_genomes_project 4 120868107 120873394 - MGP_BALBcJ_P0067639 Ndufs5 protein_coding protein_coding MGP_BALBcJ_T0068921.1 MGP_BALBcJ_G0029012.1 mouse_genomes_project 4 138188040 138222822 - MGP_BALBcJ_P0068921 Padi4 protein_coding protein_coding MGP_BALBcJ_T0068922.1 MGP_BALBcJ_G0029012.1 mouse_genomes_project 4 138195151 138201363 - Padi4 protein_coding processed_transcript MGP_BALBcJ_T0068923.1 MGP_BALBcJ_G0029012.1 mouse_genomes_project 4 138199343 138205216 - Padi4 protein_coding processed_transcript MGP_BALBcJ_T0068924.1 MGP_BALBcJ_G0029012.1 mouse_genomes_project 4 138201531 138205209 - Padi4 protein_coding processed_transcript MGP_BALBcJ_T0066031.1 MGP_BALBcJ_G0028364.1 mouse_genomes_project 4 68719754 68722077 - MGP_BALBcJ_P0066031 Gm11232 protein_coding protein_coding MGP_BALBcJ_T0068587.1 MGP_BALBcJ_G0028929.1 mouse_genomes_project 4 132814291 132847181 - MGP_BALBcJ_P0068587 Grhl3 protein_coding protein_coding MGP_BALBcJ_T0068588.1 MGP_BALBcJ_G0028929.1 mouse_genomes_project 4 132815062 132846975 - MGP_BALBcJ_P0068588 Grhl3 protein_coding unknown_likely_coding MGP_BALBcJ_T0014664.1 MGP_BALBcJ_G0012761.1 mouse_genomes_project 4 99016616 99021537 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068508.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131776817 131786506 - MGP_BALBcJ_P0068508 Mtfr1l protein_coding protein_coding MGP_BALBcJ_T0068509.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131776824 131786625 - MGP_BALBcJ_P0068509 Mtfr1l protein_coding protein_coding MGP_BALBcJ_T0068510.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131776831 131786536 - MGP_BALBcJ_P0068510 Mtfr1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0068511.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131779629 131786496 - Mtfr1l protein_coding retained_intron MGP_BALBcJ_T0068512.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131780370 131786334 - MGP_BALBcJ_P0068512 Mtfr1l protein_coding protein_coding MGP_BALBcJ_T0068513.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131780405 131786625 - MGP_BALBcJ_P0068513 Mtfr1l protein_coding protein_coding MGP_BALBcJ_T0068514.1 MGP_BALBcJ_G0028913.1 mouse_genomes_project 4 131780477 131786282 - Mtfr1l protein_coding retained_intron MGP_BALBcJ_T0067773.1 MGP_BALBcJ_G0028758.1 mouse_genomes_project 4 123475585 123488662 + MGP_BALBcJ_P0067773 Trappc3 protein_coding protein_coding MGP_BALBcJ_T0067774.1 MGP_BALBcJ_G0028758.1 mouse_genomes_project 4 123475660 123486761 + Trappc3 protein_coding processed_transcript MGP_BALBcJ_T0010572.1 MGP_BALBcJ_G0008697.1 mouse_genomes_project 4 40964619 40964692 - Mir5106 miRNA miRNA MGP_BALBcJ_T0065922.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59384844 59403597 - MGP_BALBcJ_P0065922 Wdr31 protein_coding protein_coding MGP_BALBcJ_T0065923.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59385846 59393084 - MGP_BALBcJ_P0065923 Wdr31 protein_coding protein_coding MGP_BALBcJ_T0065924.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59385846 59403597 - MGP_BALBcJ_P0065924 Wdr31 protein_coding protein_coding MGP_BALBcJ_T0065925.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59385846 59403597 - MGP_BALBcJ_P0065925 Wdr31 protein_coding protein_coding MGP_BALBcJ_T0065926.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59389754 59391487 - Wdr31 protein_coding retained_intron MGP_BALBcJ_T0065927.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59390599 59393525 - Wdr31 protein_coding retained_intron MGP_BALBcJ_T0065928.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59396019 59403606 - MGP_BALBcJ_P0065928 Wdr31 protein_coding protein_coding MGP_BALBcJ_T0065929.1 MGP_BALBcJ_G0028334.1 mouse_genomes_project 4 59396674 59403584 - MGP_BALBcJ_P0065929 Wdr31 protein_coding protein_coding MGP_BALBcJ_T0068313.1 MGP_BALBcJ_G0028868.1 mouse_genomes_project 4 130318990 130388970 + MGP_BALBcJ_P0068313 Wasf2 protein_coding protein_coding MGP_BALBcJ_T0068314.1 MGP_BALBcJ_G0028868.1 mouse_genomes_project 4 130319025 130374179 + MGP_BALBcJ_P0068314 Wasf2 protein_coding protein_coding MGP_BALBcJ_T0068315.1 MGP_BALBcJ_G0028868.1 mouse_genomes_project 4 130319114 130365627 + Wasf2 protein_coding processed_transcript MGP_BALBcJ_T0068316.1 MGP_BALBcJ_G0028868.1 mouse_genomes_project 4 130365067 130365679 + Wasf2 protein_coding processed_transcript MGP_BALBcJ_T0068317.1 MGP_BALBcJ_G0028868.1 mouse_genomes_project 4 130365437 130385718 + MGP_BALBcJ_P0068317 Wasf2 protein_coding protein_coding MGP_BALBcJ_T0068318.1 MGP_BALBcJ_G0028868.1 mouse_genomes_project 4 130378310 130379842 + Wasf2 protein_coding processed_transcript MGP_BALBcJ_T0018049.1 MGP_BALBcJ_G0015512.1 mouse_genomes_project 4 120080002 120082165 + 4933421A08Rik processed_transcript processed_transcript MGP_BALBcJ_T0065999.1 MGP_BALBcJ_G0028352.1 mouse_genomes_project 4 60562249 60577854 - MGP_BALBcJ_P0065999 1700018C11Rik protein_coding protein_coding MGP_BALBcJ_T0066000.1 MGP_BALBcJ_G0028352.1 mouse_genomes_project 4 60562249 60577866 - MGP_BALBcJ_P0066000 1700018C11Rik protein_coding protein_coding MGP_BALBcJ_T0101145.1 MGP_BALBcJ_G0039181.1 mouse_genomes_project 4 86228633 86228773 - Gm26490 snoRNA snoRNA MGP_BALBcJ_T0007786.1 MGP_BALBcJ_G0006360.1 mouse_genomes_project 4 16564930 16574899 - 4930598A11Rik lincRNA lincRNA MGP_BALBcJ_T0010631.1 MGP_BALBcJ_G0008756.1 mouse_genomes_project 4 138806007 138806084 + Gm25690 miRNA miRNA MGP_BALBcJ_T0101104.1 MGP_BALBcJ_G0039140.1 mouse_genomes_project 4 17863417 17863502 + Gm25977 snoRNA snoRNA MGP_BALBcJ_T0069313.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147281043 147380543 - MGP_BALBcJ_P0069313 Ube4b protein_coding protein_coding MGP_BALBcJ_T0069314.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147281049 147287742 - MGP_BALBcJ_P0069314 Ube4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069315.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147282126 147284460 - Ube4b protein_coding processed_transcript MGP_BALBcJ_T0069316.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147282303 147379699 - MGP_BALBcJ_P0069316 Ube4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069317.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147282303 147379699 - MGP_BALBcJ_P0069317 Ube4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069318.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147287829 147288736 - Ube4b protein_coding processed_transcript MGP_BALBcJ_T0069319.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147303699 147304677 - Ube4b protein_coding retained_intron MGP_BALBcJ_T0069320.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147318345 147380425 - Ube4b protein_coding retained_intron MGP_BALBcJ_T0069321.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147338070 147380394 - Ube4b protein_coding processed_transcript MGP_BALBcJ_T0069322.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147340025 147340607 - Ube4b protein_coding processed_transcript MGP_BALBcJ_T0069323.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147352064 147380010 - Ube4b protein_coding retained_intron MGP_BALBcJ_T0069324.1 MGP_BALBcJ_G0029119.1 mouse_genomes_project 4 147352076 147352943 - Ube4b protein_coding processed_transcript MGP_BALBcJ_T0064839.1 MGP_BALBcJ_G0028071.1 mouse_genomes_project 4 21719348 21760804 - MGP_BALBcJ_P0064839 Fhl5 protein_coding protein_coding MGP_BALBcJ_T0064840.1 MGP_BALBcJ_G0028071.1 mouse_genomes_project 4 21719348 21760804 - MGP_BALBcJ_P0064840 Fhl5 protein_coding protein_coding MGP_BALBcJ_T0065960.1 MGP_BALBcJ_G0028343.1 mouse_genomes_project 4 60088238 60094666 - Kif12 protein_coding processed_transcript MGP_BALBcJ_T0065961.1 MGP_BALBcJ_G0028343.1 mouse_genomes_project 4 60088241 60094751 - MGP_BALBcJ_P0065961 Kif12 protein_coding protein_coding MGP_BALBcJ_T0065962.1 MGP_BALBcJ_G0028343.1 mouse_genomes_project 4 60090081 60093402 - Kif12 protein_coding processed_transcript MGP_BALBcJ_T0065963.1 MGP_BALBcJ_G0028343.1 mouse_genomes_project 4 60090333 60093794 - Kif12 protein_coding processed_transcript MGP_BALBcJ_T0065964.1 MGP_BALBcJ_G0028343.1 mouse_genomes_project 4 60092011 60094350 - Kif12 protein_coding processed_transcript MGP_BALBcJ_T0010636.1 MGP_BALBcJ_G0008761.1 mouse_genomes_project 4 148044692 148044794 + Mir34a miRNA miRNA MGP_BALBcJ_T0068265.1 MGP_BALBcJ_G0028857.1 mouse_genomes_project 4 129747985 129767693 + MGP_BALBcJ_P0068265 Ptafr protein_coding protein_coding MGP_BALBcJ_T0018022.1 MGP_BALBcJ_G0015492.1 mouse_genomes_project 4 82448207 82723091 + processed_transcript processed_transcript MGP_BALBcJ_T0014513.1 MGP_BALBcJ_G0012610.1 mouse_genomes_project 4 43096117 43096528 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0068207.1 MGP_BALBcJ_G0028845.1 mouse_genomes_project 4 129271244 129305880 - MGP_BALBcJ_P0068207 Oprd1 protein_coding protein_coding MGP_BALBcJ_T0004486.1 MGP_BALBcJ_G0003900.1 mouse_genomes_project 4 106425400 106425819 - Ttc39aos1 antisense antisense MGP_BALBcJ_T0004487.1 MGP_BALBcJ_G0003900.1 mouse_genomes_project 4 106425415 106427762 - Ttc39aos1 antisense antisense MGP_BALBcJ_T0067031.1 MGP_BALBcJ_G0028584.1 mouse_genomes_project 4 112502174 112532205 + MGP_BALBcJ_P0067031 Cyp4a10 protein_coding protein_coding MGP_BALBcJ_T0067032.1 MGP_BALBcJ_G0028584.1 mouse_genomes_project 4 112502198 112532202 + MGP_BALBcJ_P0067032 Cyp4a10 protein_coding protein_coding MGP_BALBcJ_T0066974.1 MGP_BALBcJ_G0028563.1 mouse_genomes_project 4 108914813 108927172 + Skint8 protein_coding processed_transcript MGP_BALBcJ_T0066975.1 MGP_BALBcJ_G0028563.1 mouse_genomes_project 4 108914819 108931655 + MGP_BALBcJ_P0066975 Skint8 protein_coding protein_coding MGP_BALBcJ_T0066976.1 MGP_BALBcJ_G0028563.1 mouse_genomes_project 4 108914914 108929876 + Skint8 protein_coding retained_intron MGP_BALBcJ_T0066977.1 MGP_BALBcJ_G0028563.1 mouse_genomes_project 4 108914978 108942304 + MGP_BALBcJ_P0066977 Skint8 protein_coding protein_coding MGP_BALBcJ_T0066978.1 MGP_BALBcJ_G0028563.1 mouse_genomes_project 4 108923563 108927320 + Skint8 protein_coding processed_transcript MGP_BALBcJ_T0014796.1 MGP_BALBcJ_G0012893.1 mouse_genomes_project 4 142329404 142337993 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018000.1 MGP_BALBcJ_G0015477.1 mouse_genomes_project 4 29691323 29695528 - 4933421O10Rik processed_transcript processed_transcript MGP_BALBcJ_T0018032.1 MGP_BALBcJ_G0015500.1 mouse_genomes_project 4 92922874 92931135 - 9530080O11Rik processed_transcript processed_transcript MGP_BALBcJ_T0018033.1 MGP_BALBcJ_G0015500.1 mouse_genomes_project 4 92923402 92930515 - 9530080O11Rik processed_transcript processed_transcript MGP_BALBcJ_T0068928.1 MGP_BALBcJ_G0029015.1 mouse_genomes_project 4 138358032 138399260 + MGP_BALBcJ_P0068928 Padi2 protein_coding protein_coding MGP_BALBcJ_T0068929.1 MGP_BALBcJ_G0029015.1 mouse_genomes_project 4 138375729 138384376 + Padi2 protein_coding processed_transcript MGP_BALBcJ_T0068930.1 MGP_BALBcJ_G0029015.1 mouse_genomes_project 4 138393211 138396411 + Padi2 protein_coding processed_transcript MGP_BALBcJ_T0067028.1 MGP_BALBcJ_G0028582.1 mouse_genomes_project 4 112432554 112452250 + MGP_BALBcJ_P0067028 Cyp4a30b protein_coding protein_coding MGP_BALBcJ_T0069091.1 MGP_BALBcJ_G0029054.1 mouse_genomes_project 4 140944464 140958530 - MGP_BALBcJ_P0069091 Oog4 protein_coding protein_coding MGP_BALBcJ_T0069092.1 MGP_BALBcJ_G0029054.1 mouse_genomes_project 4 140944465 140958510 - MGP_BALBcJ_P0069092 Oog4 protein_coding protein_coding MGP_BALBcJ_T0067901.1 MGP_BALBcJ_G0028790.1 mouse_genomes_project 4 126132812 126152632 + MGP_BALBcJ_P0067901 Trim62 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067902.1 MGP_BALBcJ_G0028790.1 mouse_genomes_project 4 126132820 126161134 + MGP_BALBcJ_P0067902 Trim62 protein_coding protein_coding MGP_BALBcJ_T0067816.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975188 124013001 + MGP_BALBcJ_P0067816 AU040320 protein_coding protein_coding MGP_BALBcJ_T0067817.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975197 124013112 + MGP_BALBcJ_P0067817 AU040320 protein_coding protein_coding MGP_BALBcJ_T0067818.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975199 124091506 + MGP_BALBcJ_P0067818 AU040320 protein_coding protein_coding MGP_BALBcJ_T0067819.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975414 124075263 + MGP_BALBcJ_P0067819 AU040320 protein_coding protein_coding MGP_BALBcJ_T0067820.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975414 124091506 + MGP_BALBcJ_P0067820 AU040320 protein_coding protein_coding MGP_BALBcJ_T0067821.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975438 124013015 + MGP_BALBcJ_P0067821 AU040320 protein_coding protein_coding MGP_BALBcJ_T0067822.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975458 124009431 + AU040320 protein_coding processed_transcript MGP_BALBcJ_T0067823.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 123975470 123976378 + AU040320 protein_coding processed_transcript MGP_BALBcJ_T0067824.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 124036050 124053063 + AU040320 protein_coding processed_transcript MGP_BALBcJ_T0067825.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 124056245 124060701 + AU040320 protein_coding processed_transcript MGP_BALBcJ_T0067826.1 MGP_BALBcJ_G0028770.1 mouse_genomes_project 4 124071443 124074478 + AU040320 protein_coding processed_transcript MGP_BALBcJ_T0014768.1 MGP_BALBcJ_G0012865.1 mouse_genomes_project 4 132674544 132675012 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101126.1 MGP_BALBcJ_G0039162.1 mouse_genomes_project 4 52263964 52264098 - Gm22150 snoRNA snoRNA MGP_BALBcJ_T0068362.1 MGP_BALBcJ_G0028881.1 mouse_genomes_project 4 130787492 130797772 + MGP_BALBcJ_P0068362 Gpatch3 protein_coding protein_coding MGP_BALBcJ_T0068363.1 MGP_BALBcJ_G0028881.1 mouse_genomes_project 4 130792380 130795687 + Gpatch3 protein_coding processed_transcript MGP_BALBcJ_T0011550.1 MGP_BALBcJ_G0009675.1 mouse_genomes_project 4 75583473 75583559 + Gm22262 misc_RNA misc_RNA MGP_BALBcJ_T0102550.1 MGP_BALBcJ_G0040366.1 mouse_genomes_project 4 141019892 141022418 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0069817.1 MGP_BALBcJ_G0029208.1 mouse_genomes_project 4 153873288 153877428 - MGP_BALBcJ_P0069817 Tmem88b protein_coding protein_coding MGP_BALBcJ_T0067256.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114199749 114222708 - MGP_BALBcJ_P0067256 Kif2c protein_coding protein_coding MGP_BALBcJ_T0067257.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114200253 114218830 - MGP_BALBcJ_P0067257 Kif2c protein_coding protein_coding MGP_BALBcJ_T0067258.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114204787 114205521 - Kif2c protein_coding retained_intron MGP_BALBcJ_T0067259.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114213766 114222611 - Kif2c protein_coding retained_intron MGP_BALBcJ_T0067260.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114213768 114222675 - Kif2c protein_coding processed_transcript MGP_BALBcJ_T0067261.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114214506 114222661 - Kif2c protein_coding retained_intron MGP_BALBcJ_T0067262.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114215047 114218812 - Kif2c protein_coding processed_transcript MGP_BALBcJ_T0067263.1 MGP_BALBcJ_G0028629.1 mouse_genomes_project 4 114215090 114218828 - MGP_BALBcJ_P0067263 Kif2c protein_coding protein_coding MGP_BALBcJ_T0067691.1 MGP_BALBcJ_G0028740.1 mouse_genomes_project 4 122058594 122064615 + MGP_BALBcJ_P0067691 protein_coding protein_coding MGP_BALBcJ_T0067692.1 MGP_BALBcJ_G0028740.1 mouse_genomes_project 4 122063495 122094203 + MGP_BALBcJ_P0067692 protein_coding protein_coding MGP_BALBcJ_T0067693.1 MGP_BALBcJ_G0028740.1 mouse_genomes_project 4 122076654 122079844 + protein_coding processed_transcript MGP_BALBcJ_T0067347.1 MGP_BALBcJ_G0028645.1 mouse_genomes_project 4 115194745 115240994 - MGP_BALBcJ_P0067347 Kdm4a protein_coding protein_coding MGP_BALBcJ_T0067348.1 MGP_BALBcJ_G0028645.1 mouse_genomes_project 4 115194747 115240605 - MGP_BALBcJ_P0067348 Kdm4a protein_coding protein_coding MGP_BALBcJ_T0067349.1 MGP_BALBcJ_G0028645.1 mouse_genomes_project 4 115194794 115240929 - MGP_BALBcJ_P0067349 Kdm4a protein_coding protein_coding MGP_BALBcJ_T0067350.1 MGP_BALBcJ_G0028645.1 mouse_genomes_project 4 115201176 115240897 - MGP_BALBcJ_P0067350 Kdm4a protein_coding protein_coding MGP_BALBcJ_T0067351.1 MGP_BALBcJ_G0028645.1 mouse_genomes_project 4 115204919 115205894 - Kdm4a protein_coding processed_transcript MGP_BALBcJ_T0067352.1 MGP_BALBcJ_G0028645.1 mouse_genomes_project 4 115208185 115221536 - Kdm4a protein_coding processed_transcript MGP_BALBcJ_T0014488.1 MGP_BALBcJ_G0012585.1 mouse_genomes_project 4 33162622 33163428 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069193.1 MGP_BALBcJ_G0029098.1 mouse_genomes_project 4 146027567 146059767 - MGP_BALBcJ_P0069193 Draxin protein_coding protein_coding MGP_BALBcJ_T0004566.1 MGP_BALBcJ_G0003963.1 mouse_genomes_project 4 145931115 145934039 - Gm13054 antisense antisense MGP_BALBcJ_T0068456.1 MGP_BALBcJ_G0028899.1 mouse_genomes_project 4 131465333 131475648 - MGP_BALBcJ_P0068456 Cnksr1 protein_coding protein_coding MGP_BALBcJ_T0068457.1 MGP_BALBcJ_G0028899.1 mouse_genomes_project 4 131465341 131475588 - Cnksr1 protein_coding processed_transcript MGP_BALBcJ_T0068458.1 MGP_BALBcJ_G0028899.1 mouse_genomes_project 4 131466646 131467721 - Cnksr1 protein_coding processed_transcript MGP_BALBcJ_T0068459.1 MGP_BALBcJ_G0028899.1 mouse_genomes_project 4 131467710 131470445 - Cnksr1 protein_coding processed_transcript MGP_BALBcJ_T0068460.1 MGP_BALBcJ_G0028899.1 mouse_genomes_project 4 131469756 131473234 - Cnksr1 protein_coding processed_transcript MGP_BALBcJ_T0010586.1 MGP_BALBcJ_G0008711.1 mouse_genomes_project 4 88430009 88430089 - Mir6402 miRNA miRNA MGP_BALBcJ_T0014530.1 MGP_BALBcJ_G0012627.1 mouse_genomes_project 4 49301867 49302173 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099837.1 MGP_BALBcJ_G0037873.1 mouse_genomes_project 4 59197771 59197878 + Gm23148 snRNA snRNA MGP_BALBcJ_T0102520.1 MGP_BALBcJ_G0040336.1 mouse_genomes_project 4 85704483 85705028 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066297.1 MGP_BALBcJ_G0028427.1 mouse_genomes_project 4 89184245 89187138 - MGP_BALBcJ_P0066297 Izumo3 protein_coding protein_coding MGP_BALBcJ_T0066298.1 MGP_BALBcJ_G0028427.1 mouse_genomes_project 4 89184254 89187151 - MGP_BALBcJ_P0066298 Izumo3 protein_coding protein_coding MGP_BALBcJ_T0004588.1 MGP_BALBcJ_G0003980.1 mouse_genomes_project 4 152017287 152020158 - BC039966 antisense antisense MGP_BALBcJ_T0067589.1 MGP_BALBcJ_G0028712.1 mouse_genomes_project 4 120116324 120117412 + MGP_BALBcJ_P0067589 Mycl protein_coding protein_coding MGP_BALBcJ_T0067590.1 MGP_BALBcJ_G0028712.1 mouse_genomes_project 4 120116616 120123153 + MGP_BALBcJ_P0067590 Mycl protein_coding protein_coding MGP_BALBcJ_T0067591.1 MGP_BALBcJ_G0028712.1 mouse_genomes_project 4 120116771 120123153 + MGP_BALBcJ_P0067591 Mycl protein_coding protein_coding MGP_BALBcJ_T0067592.1 MGP_BALBcJ_G0028712.1 mouse_genomes_project 4 120119547 120121135 + Mycl protein_coding processed_transcript MGP_BALBcJ_T0067593.1 MGP_BALBcJ_G0028712.1 mouse_genomes_project 4 120120006 120121185 + Mycl protein_coding processed_transcript MGP_BALBcJ_T0065427.1 MGP_BALBcJ_G0028208.1 mouse_genomes_project 4 40745497 40774763 + MGP_BALBcJ_P0065427 Clta protein_coding protein_coding MGP_BALBcJ_T0065428.1 MGP_BALBcJ_G0028208.1 mouse_genomes_project 4 40754554 40774763 + MGP_BALBcJ_P0065428 Clta protein_coding protein_coding MGP_BALBcJ_T0065429.1 MGP_BALBcJ_G0028208.1 mouse_genomes_project 4 40754559 40774762 + MGP_BALBcJ_P0065429 Clta protein_coding protein_coding MGP_BALBcJ_T0065430.1 MGP_BALBcJ_G0028208.1 mouse_genomes_project 4 40754594 40774763 + MGP_BALBcJ_P0065430 Clta protein_coding protein_coding MGP_BALBcJ_T0065431.1 MGP_BALBcJ_G0028208.1 mouse_genomes_project 4 40754594 40774763 + MGP_BALBcJ_P0065431 Clta protein_coding protein_coding MGP_BALBcJ_T0065432.1 MGP_BALBcJ_G0028208.1 mouse_genomes_project 4 40754602 40774763 + MGP_BALBcJ_P0065432 Clta protein_coding protein_coding MGP_BALBcJ_T0069224.1 MGP_BALBcJ_G0029105.1 mouse_genomes_project 4 146384660 146391178 + Mtor protein_coding retained_intron MGP_BALBcJ_T0069225.1 MGP_BALBcJ_G0029105.1 mouse_genomes_project 4 146384660 146494135 + MGP_BALBcJ_P0069225 Mtor protein_coding protein_coding MGP_BALBcJ_T0069226.1 MGP_BALBcJ_G0029105.1 mouse_genomes_project 4 146384674 146391182 + MGP_BALBcJ_P0069226 Mtor protein_coding protein_coding MGP_BALBcJ_T0069228.1 MGP_BALBcJ_G0029105.1 mouse_genomes_project 4 146480557 146484121 + Mtor protein_coding retained_intron MGP_BALBcJ_T0064791.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365246 18397879 + MGP_BALBcJ_P0064791 Pnisr protein_coding protein_coding MGP_BALBcJ_T0064792.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365711 18395159 + MGP_BALBcJ_P0064792 Pnisr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0064793.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365718 18397871 + MGP_BALBcJ_P0064793 Pnisr protein_coding protein_coding MGP_BALBcJ_T0064794.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365721 18378091 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064795.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365721 18392746 + MGP_BALBcJ_P0064795 Pnisr protein_coding protein_coding MGP_BALBcJ_T0064796.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365727 18375613 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064797.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365736 18372588 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064798.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18365744 18379746 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064799.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18371731 18376825 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064800.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18376348 18379666 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064801.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18376621 18378509 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064802.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18392437 18395268 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0064803.1 MGP_BALBcJ_G0028062.1 mouse_genomes_project 4 18395607 18396660 + Pnisr protein_coding processed_transcript MGP_BALBcJ_T0066302.1 MGP_BALBcJ_G0028430.1 mouse_genomes_project 4 91548860 91549393 + MGP_BALBcJ_P0066302 Gm10306 protein_coding protein_coding MGP_BALBcJ_T0067297.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114887749 114898011 + MGP_BALBcJ_P0067297 Slc6a9 protein_coding protein_coding MGP_BALBcJ_T0067298.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114887961 114925264 + MGP_BALBcJ_P0067298 Slc6a9 protein_coding protein_coding MGP_BALBcJ_T0067299.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114888087 114931218 + MGP_BALBcJ_P0067299 Slc6a9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067300.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114888192 114913148 + Slc6a9 protein_coding processed_transcript MGP_BALBcJ_T0067301.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114904097 114919979 + MGP_BALBcJ_P0067301 Slc6a9 protein_coding protein_coding MGP_BALBcJ_T0067302.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114904103 114919979 + MGP_BALBcJ_P0067302 Slc6a9 protein_coding protein_coding MGP_BALBcJ_T0067303.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114904274 114924391 + MGP_BALBcJ_P0067303 Slc6a9 protein_coding protein_coding MGP_BALBcJ_T0067304.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114911430 114913404 + MGP_BALBcJ_P0067304 Slc6a9 protein_coding protein_coding MGP_BALBcJ_T0067305.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114911482 114911966 + Slc6a9 protein_coding processed_transcript MGP_BALBcJ_T0067317.1 MGP_BALBcJ_G0028637.1 mouse_genomes_project 4 114930107 114931220 + Slc6a9 protein_coding retained_intron MGP_BALBcJ_T0004441.1 MGP_BALBcJ_G0003869.1 mouse_genomes_project 4 50391133 50392848 - 1700060J05Rik antisense antisense MGP_BALBcJ_T0004516.1 MGP_BALBcJ_G0003924.1 mouse_genomes_project 4 122134816 122170253 - Gm12930 antisense antisense MGP_BALBcJ_T0065512.1 MGP_BALBcJ_G0028218.1 mouse_genomes_project 4 41855090 41857997 - MGP_BALBcJ_P0065512 protein_coding protein_coding MGP_BALBcJ_T0065513.1 MGP_BALBcJ_G0028218.1 mouse_genomes_project 4 41855094 41857991 - MGP_BALBcJ_P0065513 protein_coding protein_coding MGP_BALBcJ_T0065514.1 MGP_BALBcJ_G0028218.1 mouse_genomes_project 4 41855094 41857921 - MGP_BALBcJ_P0065514 protein_coding protein_coding MGP_BALBcJ_T0065515.1 MGP_BALBcJ_G0028218.1 mouse_genomes_project 4 41855277 41857991 - MGP_BALBcJ_P0065515 protein_coding protein_coding MGP_BALBcJ_T0101098.1 MGP_BALBcJ_G0039134.1 mouse_genomes_project 4 2191523 2191649 - Gm24337 snoRNA snoRNA MGP_BALBcJ_T0101161.1 MGP_BALBcJ_G0039197.1 mouse_genomes_project 4 118162393 118162518 - Gm26186 snoRNA snoRNA MGP_BALBcJ_T0067924.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126363825 126374252 - MGP_BALBcJ_P0067924 Hpca protein_coding protein_coding MGP_BALBcJ_T0067925.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126363825 126371183 - MGP_BALBcJ_P0067925 Hpca protein_coding protein_coding MGP_BALBcJ_T0067926.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126363831 126373956 - MGP_BALBcJ_P0067926 Hpca protein_coding protein_coding MGP_BALBcJ_T0067927.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126363831 126373507 - MGP_BALBcJ_P0067927 Hpca protein_coding protein_coding MGP_BALBcJ_T0067928.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126364515 126373162 - MGP_BALBcJ_P0067928 Hpca protein_coding protein_coding MGP_BALBcJ_T0067929.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126364529 126374105 - MGP_BALBcJ_P0067929 Hpca protein_coding protein_coding MGP_BALBcJ_T0067930.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126364704 126374141 - MGP_BALBcJ_P0067930 Hpca protein_coding protein_coding MGP_BALBcJ_T0067931.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126364895 126373955 - MGP_BALBcJ_P0067931 Hpca protein_coding protein_coding MGP_BALBcJ_T0067932.1 MGP_BALBcJ_G0028795.1 mouse_genomes_project 4 126370820 126373924 - MGP_BALBcJ_P0067932 Hpca protein_coding protein_coding MGP_BALBcJ_T0066438.1 MGP_BALBcJ_G0028459.1 mouse_genomes_project 4 96040661 96050938 + MGP_BALBcJ_P0066438 Angptl3 protein_coding protein_coding MGP_BALBcJ_T0066439.1 MGP_BALBcJ_G0028459.1 mouse_genomes_project 4 96042886 96050832 + Angptl3 protein_coding processed_transcript MGP_BALBcJ_T0066440.1 MGP_BALBcJ_G0028459.1 mouse_genomes_project 4 96042910 96058984 + Angptl3 protein_coding processed_transcript MGP_BALBcJ_T0014402.1 MGP_BALBcJ_G0012499.1 mouse_genomes_project 4 11632069 11632396 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066149.1 MGP_BALBcJ_G0028386.1 mouse_genomes_project 4 80465571 80801850 + MGP_BALBcJ_P0066149 Ccdc171 protein_coding protein_coding MGP_BALBcJ_T0066150.1 MGP_BALBcJ_G0028386.1 mouse_genomes_project 4 80465640 80494336 + MGP_BALBcJ_P0066150 Ccdc171 protein_coding protein_coding MGP_BALBcJ_T0066151.1 MGP_BALBcJ_G0028386.1 mouse_genomes_project 4 80465665 80801765 + MGP_BALBcJ_P0066151 Ccdc171 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066152.1 MGP_BALBcJ_G0028386.1 mouse_genomes_project 4 80476255 80801627 + MGP_BALBcJ_P0066152 Ccdc171 protein_coding unknown_likely_coding MGP_BALBcJ_T0066153.1 MGP_BALBcJ_G0028386.1 mouse_genomes_project 4 80631642 80733228 + Ccdc171 protein_coding processed_transcript MGP_BALBcJ_T0069118.1 MGP_BALBcJ_G0029070.1 mouse_genomes_project 4 142019455 142022680 + MGP_BALBcJ_P0069118 Pramef17 protein_coding protein_coding MGP_BALBcJ_T0007902.1 MGP_BALBcJ_G0006456.1 mouse_genomes_project 4 105653076 105656730 - Gm17354 lincRNA lincRNA MGP_BALBcJ_T0064753.1 MGP_BALBcJ_G0028050.1 mouse_genomes_project 4 16109214 16132821 + MGP_BALBcJ_P0064753 Rmdn1 protein_coding protein_coding MGP_BALBcJ_T0064754.1 MGP_BALBcJ_G0028050.1 mouse_genomes_project 4 16109259 16141059 + MGP_BALBcJ_P0064754 Rmdn1 protein_coding protein_coding MGP_BALBcJ_T0065084.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38283212 38285967 - 1110017D15Rik protein_coding processed_transcript MGP_BALBcJ_T0065085.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38283212 38285957 - 1110017D15Rik protein_coding processed_transcript MGP_BALBcJ_T0065086.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38283212 38285962 - 1110017D15Rik protein_coding processed_transcript MGP_BALBcJ_T0065087.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38283212 38289656 - MGP_BALBcJ_P0065087 1110017D15Rik protein_coding protein_coding MGP_BALBcJ_T0065088.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38283212 38298223 - MGP_BALBcJ_P0065088 1110017D15Rik protein_coding protein_coding MGP_BALBcJ_T0065089.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38283212 38298223 - MGP_BALBcJ_P0065089 1110017D15Rik protein_coding protein_coding MGP_BALBcJ_T0065090.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38285327 38298218 - 1110017D15Rik protein_coding processed_transcript MGP_BALBcJ_T0065091.1 MGP_BALBcJ_G0028133.1 mouse_genomes_project 4 38286720 38287151 - 1110017D15Rik protein_coding processed_transcript MGP_BALBcJ_T0067073.1 MGP_BALBcJ_G0028593.1 mouse_genomes_project 4 112902935 112906490 + MGP_BALBcJ_P0067073 Kncn protein_coding protein_coding MGP_BALBcJ_T0067074.1 MGP_BALBcJ_G0028593.1 mouse_genomes_project 4 112904402 112908052 + Kncn protein_coding processed_transcript MGP_BALBcJ_T0004488.1 MGP_BALBcJ_G0003901.1 mouse_genomes_project 4 106995278 106996353 - Dmrta2os antisense antisense MGP_BALBcJ_T0004489.1 MGP_BALBcJ_G0003901.1 mouse_genomes_project 4 106995287 106996031 - Dmrta2os antisense antisense MGP_BALBcJ_T0067652.1 MGP_BALBcJ_G0028728.1 mouse_genomes_project 4 121083488 121103230 + MGP_BALBcJ_P0067652 Rragc protein_coding protein_coding MGP_BALBcJ_T0067653.1 MGP_BALBcJ_G0028728.1 mouse_genomes_project 4 121083516 121103226 + MGP_BALBcJ_P0067653 Rragc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0067655.1 MGP_BALBcJ_G0028728.1 mouse_genomes_project 4 121085107 121087012 + Rragc protein_coding processed_transcript MGP_BALBcJ_T0067656.1 MGP_BALBcJ_G0028728.1 mouse_genomes_project 4 121086927 121095991 + Rragc protein_coding retained_intron MGP_BALBcJ_T0067657.1 MGP_BALBcJ_G0028728.1 mouse_genomes_project 4 121087302 121101779 + Rragc protein_coding processed_transcript MGP_BALBcJ_T0064714.1 MGP_BALBcJ_G0028035.1 mouse_genomes_project 4 10962820 11100015 - MGP_BALBcJ_P0064714 Slc26a7 protein_coding protein_coding MGP_BALBcJ_T0064715.1 MGP_BALBcJ_G0028035.1 mouse_genomes_project 4 10965679 10976652 - Slc26a7 protein_coding processed_transcript MGP_BALBcJ_T0064716.1 MGP_BALBcJ_G0028035.1 mouse_genomes_project 4 11029169 11099733 - MGP_BALBcJ_P0064716 Slc26a7 protein_coding protein_coding MGP_BALBcJ_T0064717.1 MGP_BALBcJ_G0028035.1 mouse_genomes_project 4 11052995 11099879 - MGP_BALBcJ_P0064717 Slc26a7 protein_coding protein_coding MGP_BALBcJ_T0014704.1 MGP_BALBcJ_G0012801.1 mouse_genomes_project 4 113886684 113887131 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065930.1 MGP_BALBcJ_G0028335.1 mouse_genomes_project 4 59412985 59431215 + MGP_BALBcJ_P0065930 Bspry protein_coding protein_coding MGP_BALBcJ_T0065931.1 MGP_BALBcJ_G0028335.1 mouse_genomes_project 4 59412985 59431215 + MGP_BALBcJ_P0065931 Bspry protein_coding protein_coding MGP_BALBcJ_T0065932.1 MGP_BALBcJ_G0028335.1 mouse_genomes_project 4 59413021 59419367 + MGP_BALBcJ_P0065932 Bspry protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065280.1 MGP_BALBcJ_G0028178.1 mouse_genomes_project 4 39996494 40071524 + Atp8b5 protein_coding retained_intron MGP_BALBcJ_T0065281.1 MGP_BALBcJ_G0028178.1 mouse_genomes_project 4 39996505 40101669 + MGP_BALBcJ_P0065281 Atp8b5 protein_coding protein_coding MGP_BALBcJ_T0065282.1 MGP_BALBcJ_G0028178.1 mouse_genomes_project 4 39996520 40101671 + MGP_BALBcJ_P0065282 Atp8b5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065283.1 MGP_BALBcJ_G0028178.1 mouse_genomes_project 4 39996520 40051553 + MGP_BALBcJ_P0065283 Atp8b5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0065284.1 MGP_BALBcJ_G0028178.1 mouse_genomes_project 4 39996526 40053240 + MGP_BALBcJ_P0065284 Atp8b5 protein_coding protein_coding MGP_BALBcJ_T0069153.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145790226 145798199 - MGP_BALBcJ_P0069153 Miip protein_coding protein_coding MGP_BALBcJ_T0069154.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145790234 145798296 - MGP_BALBcJ_P0069154 Miip protein_coding protein_coding MGP_BALBcJ_T0069155.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145790238 145792231 - Miip protein_coding retained_intron MGP_BALBcJ_T0069156.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145790239 145797979 - Miip protein_coding retained_intron MGP_BALBcJ_T0069157.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145790239 145797963 - MGP_BALBcJ_P0069157 Miip protein_coding protein_coding MGP_BALBcJ_T0069158.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145792268 145798146 - Miip protein_coding retained_intron MGP_BALBcJ_T0069159.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145793021 145795017 - Miip protein_coding retained_intron MGP_BALBcJ_T0069160.1 MGP_BALBcJ_G0029088.1 mouse_genomes_project 4 145795602 145798003 - Miip protein_coding retained_intron MGP_BALBcJ_T0066595.1 MGP_BALBcJ_G0028494.1 mouse_genomes_project 4 101851344 101853389 + MGP_BALBcJ_P0066595 Gm17662 protein_coding protein_coding MGP_BALBcJ_T0001416.1 MGP_BALBcJ_G0001338.1 mouse_genomes_project 4 120469134 120471149 + TEC TEC MGP_BALBcJ_T0014703.1 MGP_BALBcJ_G0012800.1 mouse_genomes_project 4 113873429 113874071 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004436.1 MGP_BALBcJ_G0003865.1 mouse_genomes_project 4 43069002 43112368 - Gm12446 antisense antisense MGP_BALBcJ_T0004437.1 MGP_BALBcJ_G0003865.1 mouse_genomes_project 4 43097511 43114452 - Gm12446 antisense antisense MGP_BALBcJ_T0066001.1 MGP_BALBcJ_G0028353.1 mouse_genomes_project 4 60617115 60618136 - Gm11214 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0066002.1 MGP_BALBcJ_G0028353.1 mouse_genomes_project 4 60617115 60617667 - MGP_BALBcJ_P0066002 Gm11214 protein_coding protein_coding MGP_BALBcJ_T0064555.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851774 2882191 + MGP_BALBcJ_P0064555 Sdcbp protein_coding protein_coding MGP_BALBcJ_T0064556.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851801 2881562 + MGP_BALBcJ_P0064556 Sdcbp protein_coding protein_coding MGP_BALBcJ_T0064557.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851832 2860250 + Sdcbp protein_coding processed_transcript MGP_BALBcJ_T0064558.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851833 2879023 + MGP_BALBcJ_P0064558 Sdcbp protein_coding protein_coding MGP_BALBcJ_T0064559.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851836 2870134 + Sdcbp protein_coding processed_transcript MGP_BALBcJ_T0064560.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851837 2870969 + MGP_BALBcJ_P0064560 Sdcbp protein_coding protein_coding MGP_BALBcJ_T0064561.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2851837 2894320 + MGP_BALBcJ_P0064561 Sdcbp protein_coding protein_coding MGP_BALBcJ_T0064562.1 MGP_BALBcJ_G0028005.1 mouse_genomes_project 4 2862961 2878907 + MGP_BALBcJ_P0064562 Sdcbp protein_coding protein_coding MGP_BALBcJ_T0064816.1 MGP_BALBcJ_G0028066.1 mouse_genomes_project 4 19015657 19021271 - MGP_BALBcJ_P0064816 Pou3f2 protein_coding protein_coding MGP_BALBcJ_T0066750.1 MGP_BALBcJ_G0028525.1 mouse_genomes_project 4 104883558 104891213 + MGP_BALBcJ_P0066750 Magoh protein_coding protein_coding MGP_BALBcJ_T0066751.1 MGP_BALBcJ_G0028525.1 mouse_genomes_project 4 104886789 104891176 + Magoh protein_coding processed_transcript MGP_BALBcJ_T0065397.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388317 40390549 - Hint2 protein_coding processed_transcript MGP_BALBcJ_T0065398.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388317 40390544 - Hint2 protein_coding processed_transcript MGP_BALBcJ_T0065399.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388318 40389057 - Hint2 protein_coding processed_transcript MGP_BALBcJ_T0065400.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388319 40388828 - Hint2 protein_coding processed_transcript MGP_BALBcJ_T0065401.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388319 40390567 - MGP_BALBcJ_P0065401 Hint2 protein_coding protein_coding MGP_BALBcJ_T0065402.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388320 40390549 - Hint2 protein_coding processed_transcript MGP_BALBcJ_T0065403.1 MGP_BALBcJ_G0028195.1 mouse_genomes_project 4 40388764 40389844 - Hint2 protein_coding processed_transcript MGP_BALBcJ_T0066871.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106081573 106139412 - MGP_BALBcJ_P0066871 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066872.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082042 106229130 - MGP_BALBcJ_P0066872 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066873.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082077 106139426 - MGP_BALBcJ_P0066873 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066874.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082082 106229168 - MGP_BALBcJ_P0066874 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066875.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082082 106229130 - MGP_BALBcJ_P0066875 Osbpl9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0066876.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082082 106229113 - MGP_BALBcJ_P0066876 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066877.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082401 106108280 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066878.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082506 106229168 - MGP_BALBcJ_P0066878 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066879.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106082514 106178614 - MGP_BALBcJ_P0066879 Osbpl9 protein_coding protein_coding MGP_BALBcJ_T0066880.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106084856 106086409 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066881.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106088428 106092919 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066882.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106088782 106139088 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066883.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106103919 106131159 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066884.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106104043 106178800 - Osbpl9 protein_coding retained_intron MGP_BALBcJ_T0066885.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106107232 106109610 - Osbpl9 protein_coding retained_intron MGP_BALBcJ_T0066886.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106108240 106129425 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066887.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106108277 106179129 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066888.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106155247 106229132 - Osbpl9 protein_coding processed_transcript MGP_BALBcJ_T0066889.1 MGP_BALBcJ_G0028549.1 mouse_genomes_project 4 106195684 106229130 - Osbpl9 protein_coding retained_intron MGP_BALBcJ_T0007911.1 MGP_BALBcJ_G0006465.1 mouse_genomes_project 4 117696540 117703501 + Gm12860 lincRNA lincRNA MGP_BALBcJ_T0004547.1 MGP_BALBcJ_G0003949.1 mouse_genomes_project 4 137551109 137552495 + Gm13027 antisense antisense MGP_BALBcJ_T0014623.1 MGP_BALBcJ_G0012720.1 mouse_genomes_project 4 87396530 87398235 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007975.1 MGP_BALBcJ_G0006504.1 mouse_genomes_project 4 134441939 134442941 - Gm13001 lincRNA lincRNA MGP_BALBcJ_T0014379.1 MGP_BALBcJ_G0012476.1 mouse_genomes_project 4 4656937 4657397 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0065499.1 MGP_BALBcJ_G0028215.1 mouse_genomes_project 4 41741250 41762313 - MGP_BALBcJ_P0065499 Zbtb5 protein_coding protein_coding MGP_BALBcJ_T0065500.1 MGP_BALBcJ_G0028215.1 mouse_genomes_project 4 41741257 41762295 - MGP_BALBcJ_P0065500 Zbtb5 protein_coding protein_coding MGP_BALBcJ_T0065501.1 MGP_BALBcJ_G0028215.1 mouse_genomes_project 4 41744623 41762046 - MGP_BALBcJ_P0065501 Zbtb5 protein_coding protein_coding MGP_BALBcJ_T0066454.1 MGP_BALBcJ_G0028464.1 mouse_genomes_project 4 96782397 96852277 - MGP_BALBcJ_P0066454 Itgb3bp protein_coding protein_coding MGP_BALBcJ_T0066455.1 MGP_BALBcJ_G0028464.1 mouse_genomes_project 4 96782897 96926027 - Itgb3bp protein_coding processed_transcript MGP_BALBcJ_T0066456.1 MGP_BALBcJ_G0028464.1 mouse_genomes_project 4 96784326 96852183 - Itgb3bp protein_coding processed_transcript MGP_BALBcJ_T0066457.1 MGP_BALBcJ_G0028464.1 mouse_genomes_project 4 96788993 96852225 - Itgb3bp protein_coding processed_transcript MGP_BALBcJ_T0066458.1 MGP_BALBcJ_G0028464.1 mouse_genomes_project 4 96798956 96852181 - Itgb3bp protein_coding processed_transcript MGP_BALBcJ_T0065369.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40298699 40310338 - Gba2 protein_coding retained_intron MGP_BALBcJ_T0065370.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40298699 40309890 - Gba2 protein_coding retained_intron MGP_BALBcJ_T0065371.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40298699 40310674 - MGP_BALBcJ_P0065371 Gba2 protein_coding protein_coding MGP_BALBcJ_T0065372.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40298700 40309890 - Gba2 protein_coding retained_intron MGP_BALBcJ_T0065373.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40300165 40301414 - Gba2 protein_coding retained_intron MGP_BALBcJ_T0065374.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40302134 40305840 - Gba2 protein_coding processed_transcript MGP_BALBcJ_T0065375.1 MGP_BALBcJ_G0028190.1 mouse_genomes_project 4 40302547 40310437 - MGP_BALBcJ_P0065375 Gba2 protein_coding protein_coding MGP_BALBcJ_T0014697.1 MGP_BALBcJ_G0012794.1 mouse_genomes_project 4 112396301 112396674 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007798.1 MGP_BALBcJ_G0006372.1 mouse_genomes_project 4 33687035 33727364 + Gm12371 lincRNA lincRNA MGP_BALBcJ_T0068849.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136585475 136672228 + MGP_BALBcJ_P0068849 Capzb protein_coding protein_coding MGP_BALBcJ_T0068850.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136585477 136683891 + MGP_BALBcJ_P0068850 Capzb protein_coding protein_coding MGP_BALBcJ_T0068851.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136585492 136631366 + Capzb protein_coding retained_intron MGP_BALBcJ_T0068852.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136585522 136683947 + Capzb protein_coding processed_transcript MGP_BALBcJ_T0068853.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136585579 136683956 + MGP_BALBcJ_P0068853 Capzb protein_coding protein_coding MGP_BALBcJ_T0068854.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136586549 136683572 + MGP_BALBcJ_P0068854 Capzb protein_coding protein_coding MGP_BALBcJ_T0068855.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136586664 136631626 + Capzb protein_coding retained_intron MGP_BALBcJ_T0068856.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136591811 136654245 + MGP_BALBcJ_P0068856 Capzb protein_coding protein_coding MGP_BALBcJ_T0068857.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136619229 136679223 + MGP_BALBcJ_P0068857 Capzb protein_coding protein_coding MGP_BALBcJ_T0068858.1 MGP_BALBcJ_G0028996.1 mouse_genomes_project 4 136681078 136681948 + Capzb protein_coding processed_transcript MGP_BALBcJ_T0065851.1 MGP_BALBcJ_G0028308.1 mouse_genomes_project 4 55770716 55785552 + MGP_BALBcJ_P0065851 Zkscan16 protein_coding protein_coding MGP_BALBcJ_T0014568.1 MGP_BALBcJ_G0012665.1 mouse_genomes_project 4 66286545 66290034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014760.1 MGP_BALBcJ_G0012857.1 mouse_genomes_project 4 130471768 130472223 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0066269.1 MGP_BALBcJ_G0028415.1 mouse_genomes_project 4 85828504 85829077 + MGP_BALBcJ_P0066269 protein_coding protein_coding MGP_BALBcJ_T0011561.1 MGP_BALBcJ_G0009686.1 mouse_genomes_project 4 113952502 113952769 + Gm25435 misc_RNA misc_RNA MGP_BALBcJ_T0014675.1 MGP_BALBcJ_G0012772.1 mouse_genomes_project 4 103247205 103247468 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014624.1 MGP_BALBcJ_G0012721.1 mouse_genomes_project 4 87405594 87406586 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014410.1 MGP_BALBcJ_G0012507.1 mouse_genomes_project 4 12603505 12603635 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102554.1 MGP_BALBcJ_G0040370.1 mouse_genomes_project 4 141881300 141890388 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0066693.1 MGP_BALBcJ_G0028516.1 mouse_genomes_project 4 104212873 104221753 + MGP_BALBcJ_P0066693 Ldlrad1 protein_coding protein_coding MGP_BALBcJ_T0014775.1 MGP_BALBcJ_G0012872.1 mouse_genomes_project 4 133891108 133891597 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007984.1 MGP_BALBcJ_G0006512.1 mouse_genomes_project 4 137810299 137815246 + Gm13016 lincRNA lincRNA MGP_BALBcJ_T0102514.1 MGP_BALBcJ_G0040330.1 mouse_genomes_project 4 70799563 70800259 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098719.1 MGP_BALBcJ_G0036773.1 mouse_genomes_project 4 17799858 17800214 + Gm22817 ribozyme ribozyme MGP_BALBcJ_T0014493.1 MGP_BALBcJ_G0012590.1 mouse_genomes_project 4 36037912 36038673 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014813.1 MGP_BALBcJ_G0012910.1 mouse_genomes_project 4 150179817 150180301 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069896.1 MGP_BALBcJ_G0029222.1 mouse_genomes_project 4 154075515 154078669 - MGP_BALBcJ_P0069896 B3galt6 protein_coding protein_coding MGP_BALBcJ_T0014626.1 MGP_BALBcJ_G0012723.1 mouse_genomes_project 4 87600486 87601110 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0064663.1 MGP_BALBcJ_G0028022.1 mouse_genomes_project 4 7951704 8016629 + MGP_BALBcJ_P0064663 1110037F02Rik protein_coding protein_coding MGP_BALBcJ_T0064664.1 MGP_BALBcJ_G0028022.1 mouse_genomes_project 4 7951704 7993598 + MGP_BALBcJ_P0064664 1110037F02Rik protein_coding protein_coding MGP_BALBcJ_T0064665.1 MGP_BALBcJ_G0028022.1 mouse_genomes_project 4 7951789 8016629 + MGP_BALBcJ_P0064665 1110037F02Rik protein_coding protein_coding MGP_BALBcJ_T0066029.1 MGP_BALBcJ_G0028363.1 mouse_genomes_project 4 67381706 67496229 - MGP_BALBcJ_P0066029 Megf9 protein_coding protein_coding MGP_BALBcJ_T0066030.1 MGP_BALBcJ_G0028363.1 mouse_genomes_project 4 67423054 67496296 - MGP_BALBcJ_P0066030 Megf9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069059.1 MGP_BALBcJ_G0029045.1 mouse_genomes_project 4 139327942 139344554 - MGP_BALBcJ_P0069059 Efhd2 protein_coding protein_coding MGP_BALBcJ_T0064901.1 MGP_BALBcJ_G0028085.1 mouse_genomes_project 4 29646557 29686114 + MGP_BALBcJ_P0064901 Rragd protein_coding protein_coding MGP_BALBcJ_T0064902.1 MGP_BALBcJ_G0028085.1 mouse_genomes_project 4 29646861 29686118 + MGP_BALBcJ_P0064902 Rragd protein_coding protein_coding MGP_BALBcJ_T0064903.1 MGP_BALBcJ_G0028085.1 mouse_genomes_project 4 29669208 29682752 + Rragd protein_coding processed_transcript MGP_BALBcJ_T0064782.1 MGP_BALBcJ_G0028060.1 mouse_genomes_project 4 18275253 18284170 - MGP_BALBcJ_P0064782 Tstd3 protein_coding protein_coding MGP_BALBcJ_T0014460.1 MGP_BALBcJ_G0012557.1 mouse_genomes_project 4 25184800 25185064 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011551.1 MGP_BALBcJ_G0009676.1 mouse_genomes_project 4 82851500 82851777 + Gm26069 misc_RNA misc_RNA MGP_BALBcJ_T0069801.1 MGP_BALBcJ_G0029204.1 mouse_genomes_project 4 153791216 153823904 + MGP_BALBcJ_P0069801 Ssu72 protein_coding protein_coding MGP_BALBcJ_T0069802.1 MGP_BALBcJ_G0029204.1 mouse_genomes_project 4 153791540 153806121 + Ssu72 protein_coding retained_intron MGP_BALBcJ_T0069803.1 MGP_BALBcJ_G0029204.1 mouse_genomes_project 4 153791551 153822221 + MGP_BALBcJ_P0069803 Ssu72 protein_coding protein_coding MGP_BALBcJ_T0099855.1 MGP_BALBcJ_G0037891.1 mouse_genomes_project 4 98220174 98220338 + Gm25124 snRNA snRNA MGP_BALBcJ_T0064616.1 MGP_BALBcJ_G0028013.1 mouse_genomes_project 4 6295002 6312955 + MGP_BALBcJ_P0064616 Gdf6 protein_coding protein_coding MGP_BALBcJ_T0065125.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38554353 38557821 + MGP_BALBcJ_P0065125 Galt protein_coding protein_coding MGP_BALBcJ_T0065126.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38554353 38557821 + MGP_BALBcJ_P0065126 Galt protein_coding protein_coding MGP_BALBcJ_T0065127.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38554378 38556675 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065128.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38554378 38555573 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065129.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38554883 38556606 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065130.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38554965 38556398 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065131.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38555086 38556606 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065132.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38555335 38557821 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065133.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38555379 38557364 + Galt protein_coding processed_transcript MGP_BALBcJ_T0065134.1 MGP_BALBcJ_G0028143.1 mouse_genomes_project 4 38555387 38556904 + Galt protein_coding processed_transcript MGP_BALBcJ_T0007875.1 MGP_BALBcJ_G0006437.1 mouse_genomes_project 4 96588334 96591850 + Gm12690 lincRNA lincRNA MGP_BALBcJ_T0066277.1 MGP_BALBcJ_G0028422.1 mouse_genomes_project 4 86327130 86335235 - MGP_BALBcJ_P0066277 Cdkn2a protein_coding protein_coding MGP_BALBcJ_T0066278.1 MGP_BALBcJ_G0028422.1 mouse_genomes_project 4 86327200 86347496 - MGP_BALBcJ_P0066278 Cdkn2a protein_coding protein_coding MGP_BALBcJ_T0067800.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123772629 123809800 + MGP_BALBcJ_P0067800 Clspn protein_coding protein_coding MGP_BALBcJ_T0067801.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123772689 123775990 + MGP_BALBcJ_P0067801 Clspn protein_coding protein_coding MGP_BALBcJ_T0067802.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123772699 123779539 + Clspn protein_coding processed_transcript MGP_BALBcJ_T0067803.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123775981 123781975 + MGP_BALBcJ_P0067803 Clspn protein_coding protein_coding MGP_BALBcJ_T0067804.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123782256 123793449 + MGP_BALBcJ_P0067804 Clspn protein_coding protein_coding MGP_BALBcJ_T0067805.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123788115 123790949 + Clspn protein_coding processed_transcript MGP_BALBcJ_T0067806.1 MGP_BALBcJ_G0028765.1 mouse_genomes_project 4 123797019 123806280 + Clspn protein_coding processed_transcript MGP_BALBcJ_T0098603.1 MGP_BALBcJ_G0036657.1 mouse_genomes_project 4 108427667 108427783 - n-R5s191 rRNA rRNA MGP_BALBcJ_T0065860.1 MGP_BALBcJ_G0028313.1 mouse_genomes_project 4 55869884 55940415 - MGP_BALBcJ_P0065860 AI481877 protein_coding protein_coding MGP_BALBcJ_T0065861.1 MGP_BALBcJ_G0028313.1 mouse_genomes_project 4 55907239 55936774 - AI481877 protein_coding retained_intron MGP_BALBcJ_T0069488.1 MGP_BALBcJ_G0029152.1 mouse_genomes_project 4 150108521 150137466 + MGP_BALBcJ_P0069488 Plekhg5 protein_coding protein_coding MGP_BALBcJ_T0069489.1 MGP_BALBcJ_G0029152.1 mouse_genomes_project 4 150118684 150138027 + MGP_BALBcJ_P0069489 Plekhg5 protein_coding protein_coding MGP_BALBcJ_T0069490.1 MGP_BALBcJ_G0029152.1 mouse_genomes_project 4 150118684 150138017 + MGP_BALBcJ_P0069490 Plekhg5 protein_coding protein_coding MGP_BALBcJ_T0069491.1 MGP_BALBcJ_G0029152.1 mouse_genomes_project 4 150127126 150128820 + Plekhg5 protein_coding retained_intron MGP_BALBcJ_T0069492.1 MGP_BALBcJ_G0029152.1 mouse_genomes_project 4 150130262 150138021 + Plekhg5 protein_coding retained_intron MGP_BALBcJ_T0069493.1 MGP_BALBcJ_G0029152.1 mouse_genomes_project 4 150130355 150130836 + Plekhg5 protein_coding retained_intron MGP_BALBcJ_T0066629.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103673529 103720191 - MGP_BALBcJ_P0066629 Mroh7 protein_coding protein_coding MGP_BALBcJ_T0066630.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103673536 103702644 - Mroh7 protein_coding processed_transcript MGP_BALBcJ_T0066631.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103673536 103701160 - Mroh7 protein_coding retained_intron MGP_BALBcJ_T0066632.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103673749 103702327 - Mroh7 protein_coding processed_transcript MGP_BALBcJ_T0066633.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103684553 103692089 - Mroh7 protein_coding processed_transcript MGP_BALBcJ_T0066634.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103701101 103720237 - MGP_BALBcJ_P0066634 Mroh7 protein_coding protein_coding MGP_BALBcJ_T0066635.1 MGP_BALBcJ_G0028507.1 mouse_genomes_project 4 103713678 103723218 - MGP_BALBcJ_P0066635 Mroh7 protein_coding protein_coding MGP_BALBcJ_T0068440.1 MGP_BALBcJ_G0028895.1 mouse_genomes_project 4 131365519 131366903 - MGP_BALBcJ_P0068440 Sh3bgrl3 protein_coding protein_coding MGP_BALBcJ_T0068441.1 MGP_BALBcJ_G0028895.1 mouse_genomes_project 4 131365526 131366853 - MGP_BALBcJ_P0068441 Sh3bgrl3 protein_coding protein_coding MGP_BALBcJ_T0068442.1 MGP_BALBcJ_G0028895.1 mouse_genomes_project 4 131365953 131366851 - Sh3bgrl3 protein_coding retained_intron MGP_BALBcJ_T0001507.1 MGP_BALBcJ_G0001425.1 mouse_genomes_project 5 33098671 33099126 + TEC TEC MGP_BALBcJ_T0001825.1 MGP_BALBcJ_G0001739.1 mouse_genomes_project 5 126227753 126228736 + TEC TEC MGP_BALBcJ_T0101213.1 MGP_BALBcJ_G0039249.1 mouse_genomes_project 5 90540569 90540713 + Gm25290 snoRNA snoRNA MGP_BALBcJ_T0014970.1 MGP_BALBcJ_G0013067.1 mouse_genomes_project 5 58000305 58000939 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101197.1 MGP_BALBcJ_G0039233.1 mouse_genomes_project 5 56207121 56207255 + Gm22536 snoRNA snoRNA MGP_BALBcJ_T0072026.1 MGP_BALBcJ_G0029582.1 mouse_genomes_project 5 68654096 68739230 - MGP_BALBcJ_P0072026 Gabrg1 protein_coding protein_coding MGP_BALBcJ_T0072027.1 MGP_BALBcJ_G0029582.1 mouse_genomes_project 5 68654824 68738817 - MGP_BALBcJ_P0072027 Gabrg1 protein_coding protein_coding MGP_BALBcJ_T0072028.1 MGP_BALBcJ_G0029582.1 mouse_genomes_project 5 68671258 68738927 - Gabrg1 protein_coding retained_intron MGP_BALBcJ_T0072029.1 MGP_BALBcJ_G0029582.1 mouse_genomes_project 5 68711805 68738927 - Gabrg1 protein_coding retained_intron MGP_BALBcJ_T0018177.1 MGP_BALBcJ_G0015559.1 mouse_genomes_project 5 150383185 150390853 + Gm43451 processed_transcript lincRNA MGP_BALBcJ_T0018178.1 MGP_BALBcJ_G0015559.1 mouse_genomes_project 5 150390228 150391098 + Gm43451 processed_transcript retained_intron MGP_BALBcJ_T0001851.1 MGP_BALBcJ_G0001765.1 mouse_genomes_project 5 131706119 131709081 - TEC TEC MGP_BALBcJ_T0075395.1 MGP_BALBcJ_G0030248.1 mouse_genomes_project 5 138328431 138343432 - MGP_BALBcJ_P0075395 Gm43720 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073662.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114805196 114834761 - MGP_BALBcJ_P0073662 Rnf10 protein_coding protein_coding MGP_BALBcJ_T0073663.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114805554 114834755 - MGP_BALBcJ_P0073663 Rnf10 protein_coding protein_coding MGP_BALBcJ_T0073664.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114805554 114834758 - MGP_BALBcJ_P0073664 Rnf10 protein_coding protein_coding MGP_BALBcJ_T0073665.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114805559 114806487 - Rnf10 protein_coding retained_intron MGP_BALBcJ_T0073666.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114805563 114834170 - MGP_BALBcJ_P0073666 Rnf10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073667.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114807487 114809872 - Rnf10 protein_coding retained_intron MGP_BALBcJ_T0073668.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114812479 114813274 - Rnf10 protein_coding processed_transcript MGP_BALBcJ_T0073669.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114815080 114817178 - Rnf10 protein_coding retained_intron MGP_BALBcJ_T0073670.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114815101 114821784 - Rnf10 protein_coding processed_transcript MGP_BALBcJ_T0073671.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114817771 114819450 - Rnf10 protein_coding retained_intron MGP_BALBcJ_T0073672.1 MGP_BALBcJ_G0029938.1 mouse_genomes_project 5 114832495 114834758 - Rnf10 protein_coding retained_intron MGP_BALBcJ_T0099976.1 MGP_BALBcJ_G0038012.1 mouse_genomes_project 5 138281190 138281268 + Gm22956 snRNA snRNA MGP_BALBcJ_T0074059.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121566524 121587870 - MGP_BALBcJ_P0074059 Sh2b3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074060.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121566684 121587904 - MGP_BALBcJ_P0074060 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0074061.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121567348 121579774 - MGP_BALBcJ_P0074061 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0074062.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121568046 121587150 - MGP_BALBcJ_P0074062 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0074063.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121568252 121587895 - MGP_BALBcJ_P0074063 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0074064.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121568326 121587862 - MGP_BALBcJ_P0074064 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0074065.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121570143 121588691 - MGP_BALBcJ_P0074065 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0074066.1 MGP_BALBcJ_G0030014.1 mouse_genomes_project 5 121579600 121587310 - MGP_BALBcJ_P0074066 Sh2b3 protein_coding protein_coding MGP_BALBcJ_T0073640.1 MGP_BALBcJ_G0029933.1 mouse_genomes_project 5 114668732 114679327 - Acads protein_coding retained_intron MGP_BALBcJ_T0073641.1 MGP_BALBcJ_G0029933.1 mouse_genomes_project 5 114668732 114679386 - MGP_BALBcJ_P0073641 Acads protein_coding protein_coding MGP_BALBcJ_T0073642.1 MGP_BALBcJ_G0029933.1 mouse_genomes_project 5 114670429 114679350 - Acads protein_coding processed_transcript MGP_BALBcJ_T0073643.1 MGP_BALBcJ_G0029933.1 mouse_genomes_project 5 114671217 114679315 - Acads protein_coding retained_intron MGP_BALBcJ_T0102586.1 MGP_BALBcJ_G0040402.1 mouse_genomes_project 5 145670125 146090683 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008097.1 MGP_BALBcJ_G0006597.1 mouse_genomes_project 5 41118953 41123115 + Gm43021 lincRNA lincRNA MGP_BALBcJ_T0075736.1 MGP_BALBcJ_G0030323.1 mouse_genomes_project 5 144001654 144039222 + MGP_BALBcJ_P0075736 Eif2ak1 protein_coding protein_coding MGP_BALBcJ_T0075737.1 MGP_BALBcJ_G0030323.1 mouse_genomes_project 5 144001697 144015391 + Eif2ak1 protein_coding retained_intron MGP_BALBcJ_T0075738.1 MGP_BALBcJ_G0030323.1 mouse_genomes_project 5 144001813 144009185 + Eif2ak1 protein_coding retained_intron MGP_BALBcJ_T0101210.1 MGP_BALBcJ_G0039246.1 mouse_genomes_project 5 85978267 85978390 + Gm25066 snoRNA snoRNA MGP_BALBcJ_T0101186.1 MGP_BALBcJ_G0039222.1 mouse_genomes_project 5 17503346 17503474 - Gm25761 snoRNA snoRNA MGP_BALBcJ_T0004708.1 MGP_BALBcJ_G0004073.1 mouse_genomes_project 5 75399538 75406624 + Gm43261 antisense antisense MGP_BALBcJ_T0001846.1 MGP_BALBcJ_G0001760.1 mouse_genomes_project 5 131428430 131429727 - TEC TEC MGP_BALBcJ_T0008122.1 MGP_BALBcJ_G0006619.1 mouse_genomes_project 5 61918864 61924128 + 5830416I19Rik lincRNA lincRNA MGP_BALBcJ_T0008422.1 MGP_BALBcJ_G0006829.1 mouse_genomes_project 5 147802541 147806115 + D5Ertd605e lincRNA lincRNA MGP_BALBcJ_T0011578.1 MGP_BALBcJ_G0009703.1 mouse_genomes_project 5 99141594 99141668 + Gm27553 misc_RNA misc_RNA MGP_BALBcJ_T0010697.1 MGP_BALBcJ_G0008822.1 mouse_genomes_project 5 123796069 123796148 + Mir7032 miRNA miRNA MGP_BALBcJ_T0075546.1 MGP_BALBcJ_G0030281.1 mouse_genomes_project 5 140124329 140442429 - MGP_BALBcJ_P0075546 Mad1l1 protein_coding protein_coding MGP_BALBcJ_T0075547.1 MGP_BALBcJ_G0030281.1 mouse_genomes_project 5 140124329 140442427 - MGP_BALBcJ_P0075547 Mad1l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075548.1 MGP_BALBcJ_G0030281.1 mouse_genomes_project 5 140124334 140292696 - Mad1l1 protein_coding processed_transcript MGP_BALBcJ_T0075549.1 MGP_BALBcJ_G0030281.1 mouse_genomes_project 5 140204509 140231301 - Mad1l1 protein_coding processed_transcript MGP_BALBcJ_T0075550.1 MGP_BALBcJ_G0030281.1 mouse_genomes_project 5 140260928 140292437 - Mad1l1 protein_coding processed_transcript MGP_BALBcJ_T0075551.1 MGP_BALBcJ_G0030281.1 mouse_genomes_project 5 140284497 140381400 - Mad1l1 protein_coding processed_transcript MGP_BALBcJ_T0004817.1 MGP_BALBcJ_G0004149.1 mouse_genomes_project 5 124814397 124814927 + Gm42838 antisense antisense MGP_BALBcJ_T0101218.1 MGP_BALBcJ_G0039254.1 mouse_genomes_project 5 98762765 98762848 - Gm26363 snoRNA snoRNA MGP_BALBcJ_T0070419.1 MGP_BALBcJ_G0029315.1 mouse_genomes_project 5 21850619 21870260 + MGP_BALBcJ_P0070419 Nos3 protein_coding protein_coding MGP_BALBcJ_T0070420.1 MGP_BALBcJ_G0029315.1 mouse_genomes_project 5 21850619 21870113 + MGP_BALBcJ_P0070420 Nos3 protein_coding protein_coding MGP_BALBcJ_T0015196.1 MGP_BALBcJ_G0013293.1 mouse_genomes_project 5 150942214 150942777 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101730.1 MGP_BALBcJ_G0039702.1 mouse_genomes_project 5 118110465 118127301 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101731.1 MGP_BALBcJ_G0039702.1 mouse_genomes_project 5 118126640 118127118 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0072488.1 MGP_BALBcJ_G0029682.1 mouse_genomes_project 5 86831759 86845068 + MGP_BALBcJ_P0072488 Ambn protein_coding protein_coding MGP_BALBcJ_T0072489.1 MGP_BALBcJ_G0029682.1 mouse_genomes_project 5 86831779 86845417 + MGP_BALBcJ_P0072489 Ambn protein_coding protein_coding MGP_BALBcJ_T0001741.1 MGP_BALBcJ_G0001656.1 mouse_genomes_project 5 105612108 105615023 - TEC TEC MGP_BALBcJ_T0001529.1 MGP_BALBcJ_G0001447.1 mouse_genomes_project 5 41850199 41853657 - TEC TEC MGP_BALBcJ_T0008305.1 MGP_BALBcJ_G0006748.1 mouse_genomes_project 5 116242324 116432919 - Gm43122 lincRNA lincRNA MGP_BALBcJ_T0008307.1 MGP_BALBcJ_G0006748.1 mouse_genomes_project 5 116420624 116432953 - Gm43122 lincRNA lincRNA MGP_BALBcJ_T0001493.1 MGP_BALBcJ_G0001412.1 mouse_genomes_project 5 29730656 29733554 - TEC TEC MGP_BALBcJ_T0001494.1 MGP_BALBcJ_G0001412.1 mouse_genomes_project 5 29730656 29733557 - TEC TEC MGP_BALBcJ_T0014929.1 MGP_BALBcJ_G0013026.1 mouse_genomes_project 5 36984294 36984751 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075612.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142624601 142627212 + MGP_BALBcJ_P0075612 Ap5z1 protein_coding protein_coding MGP_BALBcJ_T0075613.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142624656 142632547 + Ap5z1 protein_coding processed_transcript MGP_BALBcJ_T0075614.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142624701 142629648 + MGP_BALBcJ_P0075614 Ap5z1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075615.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142624711 142639049 + MGP_BALBcJ_P0075615 Ap5z1 protein_coding protein_coding MGP_BALBcJ_T0075616.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142624718 142638141 + Ap5z1 protein_coding retained_intron MGP_BALBcJ_T0075617.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142624731 142638393 + MGP_BALBcJ_P0075617 Ap5z1 protein_coding protein_coding MGP_BALBcJ_T0075618.1 MGP_BALBcJ_G0030297.1 mouse_genomes_project 5 142634437 142636092 + Ap5z1 protein_coding retained_intron MGP_BALBcJ_T0102583.1 MGP_BALBcJ_G0040399.1 mouse_genomes_project 5 140576210 140601895 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099967.1 MGP_BALBcJ_G0038003.1 mouse_genomes_project 5 121081175 121081333 + Gm24671 snRNA snRNA MGP_BALBcJ_T0075328.1 MGP_BALBcJ_G0030232.1 mouse_genomes_project 5 137995316 138022665 + MGP_BALBcJ_P0075328 protein_coding protein_coding MGP_BALBcJ_T0004668.1 MGP_BALBcJ_G0004040.1 mouse_genomes_project 5 41856080 41860401 + Gm42982 antisense antisense MGP_BALBcJ_T0075794.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144967679 144968599 + Trrap protein_coding processed_transcript MGP_BALBcJ_T0075795.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144967999 144987725 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075796.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144968040 145059988 + MGP_BALBcJ_P0075796 Trrap protein_coding unknown_likely_coding MGP_BALBcJ_T0075797.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144968451 144976995 + MGP_BALBcJ_P0075797 Trrap protein_coding protein_coding MGP_BALBcJ_T0075798.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144968701 145059981 + MGP_BALBcJ_P0075798 Trrap protein_coding protein_coding MGP_BALBcJ_T0075799.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144971027 145059954 + MGP_BALBcJ_P0075799 Trrap protein_coding protein_coding MGP_BALBcJ_T0075800.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144971027 145059979 + MGP_BALBcJ_P0075800 Trrap protein_coding protein_coding MGP_BALBcJ_T0075801.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144985356 145059979 + MGP_BALBcJ_P0075801 Trrap protein_coding protein_coding MGP_BALBcJ_T0075802.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 144991483 144993790 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075803.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 145004825 145034757 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075804.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 145012126 145013878 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075805.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 145019933 145023356 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075806.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 145039227 145040687 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075807.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 145055889 145059980 + Trrap protein_coding retained_intron MGP_BALBcJ_T0075808.1 MGP_BALBcJ_G0030338.1 mouse_genomes_project 5 145057492 145059546 + Trrap protein_coding processed_transcript MGP_BALBcJ_T0004701.1 MGP_BALBcJ_G0004068.1 mouse_genomes_project 5 72674711 72700809 + Gm15984 antisense antisense MGP_BALBcJ_T0004702.1 MGP_BALBcJ_G0004068.1 mouse_genomes_project 5 72675133 72685214 + Gm15984 antisense antisense MGP_BALBcJ_T0004746.1 MGP_BALBcJ_G0004099.1 mouse_genomes_project 5 107772049 107777321 + 1700047L14Rik antisense antisense MGP_BALBcJ_T0008351.1 MGP_BALBcJ_G0006780.1 mouse_genomes_project 5 125736976 125761659 + Gm42952 lincRNA lincRNA MGP_BALBcJ_T0008352.1 MGP_BALBcJ_G0006780.1 mouse_genomes_project 5 125740604 125761860 + Gm42952 lincRNA lincRNA MGP_BALBcJ_T0008353.1 MGP_BALBcJ_G0006780.1 mouse_genomes_project 5 125740616 125755254 + Gm42952 lincRNA lincRNA MGP_BALBcJ_T0008354.1 MGP_BALBcJ_G0006780.1 mouse_genomes_project 5 125740621 125753908 + Gm42952 lincRNA lincRNA MGP_BALBcJ_T0008355.1 MGP_BALBcJ_G0006780.1 mouse_genomes_project 5 125740626 125761803 + Gm42952 lincRNA lincRNA MGP_BALBcJ_T0008356.1 MGP_BALBcJ_G0006780.1 mouse_genomes_project 5 125740640 125754885 + Gm42952 lincRNA lincRNA MGP_BALBcJ_T0015170.1 MGP_BALBcJ_G0013267.1 mouse_genomes_project 5 144920848 144921019 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073813.1 MGP_BALBcJ_G0029962.1 mouse_genomes_project 5 116958947 116968337 + Wsb2 protein_coding retained_intron MGP_BALBcJ_T0073814.1 MGP_BALBcJ_G0029962.1 mouse_genomes_project 5 116959050 116979532 + MGP_BALBcJ_P0073814 Wsb2 protein_coding unknown_likely_coding MGP_BALBcJ_T0073815.1 MGP_BALBcJ_G0029962.1 mouse_genomes_project 5 116962607 116972551 + Wsb2 protein_coding processed_transcript MGP_BALBcJ_T0073816.1 MGP_BALBcJ_G0029962.1 mouse_genomes_project 5 116965093 116979409 + MGP_BALBcJ_P0073816 Wsb2 protein_coding protein_coding MGP_BALBcJ_T0073817.1 MGP_BALBcJ_G0029962.1 mouse_genomes_project 5 116977254 116979082 + Wsb2 protein_coding retained_intron MGP_BALBcJ_T0073818.1 MGP_BALBcJ_G0029962.1 mouse_genomes_project 5 116978052 116979117 + Wsb2 protein_coding retained_intron MGP_BALBcJ_T0014923.1 MGP_BALBcJ_G0013020.1 mouse_genomes_project 5 33254605 33256392 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015106.1 MGP_BALBcJ_G0013203.1 mouse_genomes_project 5 113307699 113308067 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001463.1 MGP_BALBcJ_G0001384.1 mouse_genomes_project 5 13975427 13976918 + TEC TEC MGP_BALBcJ_T0004842.1 MGP_BALBcJ_G0004170.1 mouse_genomes_project 5 137546134 137548532 + Gm36266 antisense antisense MGP_BALBcJ_T0004684.1 MGP_BALBcJ_G0004053.1 mouse_genomes_project 5 63502142 63505847 - Gm42726 antisense antisense MGP_BALBcJ_T0004654.1 MGP_BALBcJ_G0004031.1 mouse_genomes_project 5 34426851 34428671 + Gm43701 antisense antisense MGP_BALBcJ_T0001458.1 MGP_BALBcJ_G0001379.1 mouse_genomes_project 5 12121032 12123303 + TEC TEC MGP_BALBcJ_T0008190.1 MGP_BALBcJ_G0006675.1 mouse_genomes_project 5 95853959 95866303 + Gm2861 lincRNA lincRNA MGP_BALBcJ_T0075422.1 MGP_BALBcJ_G0030255.1 mouse_genomes_project 5 138657410 138659483 - MGP_BALBcJ_P0075422 protein_coding protein_coding MGP_BALBcJ_T0075497.1 MGP_BALBcJ_G0030268.1 mouse_genomes_project 5 139463638 139565184 - MGP_BALBcJ_P0075497 3110082I17Rik protein_coding protein_coding MGP_BALBcJ_T0075498.1 MGP_BALBcJ_G0030268.1 mouse_genomes_project 5 139463638 139565209 - MGP_BALBcJ_P0075498 3110082I17Rik protein_coding protein_coding MGP_BALBcJ_T0075499.1 MGP_BALBcJ_G0030268.1 mouse_genomes_project 5 139467889 139565193 - 3110082I17Rik protein_coding retained_intron MGP_BALBcJ_T0075509.1 MGP_BALBcJ_G0030268.1 mouse_genomes_project 5 139518972 139560210 - 3110082I17Rik protein_coding processed_transcript MGP_BALBcJ_T0001716.1 MGP_BALBcJ_G0001631.1 mouse_genomes_project 5 91528438 91530346 - TEC TEC MGP_BALBcJ_T0001633.1 MGP_BALBcJ_G0001549.1 mouse_genomes_project 5 63454434 63456172 + TEC TEC MGP_BALBcJ_T0001841.1 MGP_BALBcJ_G0001755.1 mouse_genomes_project 5 130682156 130685546 - TEC TEC MGP_BALBcJ_T0072358.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82200710 82575957 - MGP_BALBcJ_P0072358 Epha5 protein_coding protein_coding MGP_BALBcJ_T0072359.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82203740 82575842 - MGP_BALBcJ_P0072359 Epha5 protein_coding protein_coding MGP_BALBcJ_T0072360.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82203740 82575842 - MGP_BALBcJ_P0072360 Epha5 protein_coding protein_coding MGP_BALBcJ_T0072361.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82211417 82575842 - MGP_BALBcJ_P0072361 Epha5 protein_coding protein_coding MGP_BALBcJ_T0072362.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82211417 82576395 - MGP_BALBcJ_P0072362 Epha5 protein_coding protein_coding MGP_BALBcJ_T0072363.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82211417 82575842 - MGP_BALBcJ_P0072363 Epha5 protein_coding protein_coding MGP_BALBcJ_T0072364.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82253681 82575957 - Epha5 protein_coding retained_intron MGP_BALBcJ_T0072365.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82301396 82575957 - Epha5 protein_coding retained_intron MGP_BALBcJ_T0072366.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82383341 82576418 - Epha5 protein_coding retained_intron MGP_BALBcJ_T0072367.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82490632 82576418 - Epha5 protein_coding retained_intron MGP_BALBcJ_T0072368.1 MGP_BALBcJ_G0029639.1 mouse_genomes_project 5 82518425 82522104 - Epha5 protein_coding retained_intron MGP_BALBcJ_T0001710.1 MGP_BALBcJ_G0001625.1 mouse_genomes_project 5 90126910 90127732 - TEC TEC MGP_BALBcJ_T0004773.1 MGP_BALBcJ_G0004120.1 mouse_genomes_project 5 115849772 115850681 + Gm13837 antisense antisense MGP_BALBcJ_T0072710.1 MGP_BALBcJ_G0029735.1 mouse_genomes_project 5 91526350 91550793 - MGP_BALBcJ_P0072710 Ccni protein_coding protein_coding MGP_BALBcJ_T0072711.1 MGP_BALBcJ_G0029735.1 mouse_genomes_project 5 91532031 91532800 - Ccni protein_coding retained_intron MGP_BALBcJ_T0072712.1 MGP_BALBcJ_G0029735.1 mouse_genomes_project 5 91532340 91547659 - MGP_BALBcJ_P0072712 Ccni protein_coding protein_coding MGP_BALBcJ_T0072713.1 MGP_BALBcJ_G0029735.1 mouse_genomes_project 5 91534143 91550726 - MGP_BALBcJ_P0072713 Ccni protein_coding protein_coding MGP_BALBcJ_T0001657.1 MGP_BALBcJ_G0001573.1 mouse_genomes_project 5 64866637 64869340 + TEC TEC MGP_BALBcJ_T0072798.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98740315 98742807 - Hnrnpdl protein_coding processed_transcript MGP_BALBcJ_T0072799.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98740315 98745984 - MGP_BALBcJ_P0072799 Hnrnpdl protein_coding protein_coding MGP_BALBcJ_T0072800.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98741459 98745631 - MGP_BALBcJ_P0072800 Hnrnpdl protein_coding protein_coding MGP_BALBcJ_T0072801.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98741465 98746426 - MGP_BALBcJ_P0072801 Hnrnpdl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072802.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98741566 98743464 - Hnrnpdl protein_coding retained_intron MGP_BALBcJ_T0072803.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98742164 98745657 - MGP_BALBcJ_P0072803 Hnrnpdl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072804.1 MGP_BALBcJ_G0029758.1 mouse_genomes_project 5 98742698 98743862 - Hnrnpdl protein_coding retained_intron MGP_BALBcJ_T0001819.1 MGP_BALBcJ_G0001734.1 mouse_genomes_project 5 124105678 124106991 - TEC TEC MGP_BALBcJ_T0014909.1 MGP_BALBcJ_G0013006.1 mouse_genomes_project 5 30087698 30088024 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001823.1 MGP_BALBcJ_G0001737.1 mouse_genomes_project 5 125083860 125086620 - TEC TEC MGP_BALBcJ_T0101195.1 MGP_BALBcJ_G0039231.1 mouse_genomes_project 5 54882795 54882918 + Gm24902 snoRNA snoRNA MGP_BALBcJ_T0018155.1 MGP_BALBcJ_G0015553.1 mouse_genomes_project 5 129628385 129638905 + processed_transcript processed_transcript MGP_BALBcJ_T0018156.1 MGP_BALBcJ_G0015553.1 mouse_genomes_project 5 129628826 129638354 + processed_transcript processed_transcript MGP_BALBcJ_T0018157.1 MGP_BALBcJ_G0015553.1 mouse_genomes_project 5 129631056 129633211 + processed_transcript retained_intron MGP_BALBcJ_T0018158.1 MGP_BALBcJ_G0015553.1 mouse_genomes_project 5 129634327 129635644 + processed_transcript retained_intron MGP_BALBcJ_T0018159.1 MGP_BALBcJ_G0015553.1 mouse_genomes_project 5 129635718 129638399 + processed_transcript processed_transcript MGP_BALBcJ_T0018160.1 MGP_BALBcJ_G0015553.1 mouse_genomes_project 5 129637502 129638516 + processed_transcript processed_transcript MGP_BALBcJ_T0073057.1 MGP_BALBcJ_G0029815.1 mouse_genomes_project 5 106467768 106482001 + MGP_BALBcJ_P0073057 protein_coding protein_coding MGP_BALBcJ_T0073058.1 MGP_BALBcJ_G0029815.1 mouse_genomes_project 5 106468135 106483350 + MGP_BALBcJ_P0073058 protein_coding protein_coding MGP_BALBcJ_T0073059.1 MGP_BALBcJ_G0029815.1 mouse_genomes_project 5 106468166 106477884 + MGP_BALBcJ_P0073059 protein_coding protein_coding MGP_BALBcJ_T0073060.1 MGP_BALBcJ_G0029815.1 mouse_genomes_project 5 106468169 106481002 + MGP_BALBcJ_P0073060 protein_coding protein_coding MGP_BALBcJ_T0073061.1 MGP_BALBcJ_G0029815.1 mouse_genomes_project 5 106474748 106478016 + protein_coding processed_transcript MGP_BALBcJ_T0071749.1 MGP_BALBcJ_G0029537.1 mouse_genomes_project 5 60462504 60472333 - Arap2 protein_coding retained_intron MGP_BALBcJ_T0071750.1 MGP_BALBcJ_G0029537.1 mouse_genomes_project 5 60462505 60628281 - MGP_BALBcJ_P0071750 Arap2 protein_coding unknown_likely_coding MGP_BALBcJ_T0071751.1 MGP_BALBcJ_G0029537.1 mouse_genomes_project 5 60495022 60498636 - Arap2 protein_coding retained_intron MGP_BALBcJ_T0071752.1 MGP_BALBcJ_G0029537.1 mouse_genomes_project 5 60501930 60505964 - Arap2 protein_coding retained_intron MGP_BALBcJ_T0071753.1 MGP_BALBcJ_G0029537.1 mouse_genomes_project 5 60538261 60543930 - Arap2 protein_coding retained_intron MGP_BALBcJ_T0071754.1 MGP_BALBcJ_G0029537.1 mouse_genomes_project 5 60567064 60590891 - Arap2 protein_coding processed_transcript MGP_BALBcJ_T0076127.1 MGP_BALBcJ_G0030398.1 mouse_genomes_project 5 151572149 151931380 - MGP_BALBcJ_P0076127 Gm42906 protein_coding protein_coding MGP_BALBcJ_T0072408.1 MGP_BALBcJ_G0029652.1 mouse_genomes_project 5 85071565 85089286 - MGP_BALBcJ_P0072408 Ugt2b34 protein_coding protein_coding MGP_BALBcJ_T0072409.1 MGP_BALBcJ_G0029652.1 mouse_genomes_project 5 85071565 85089286 - MGP_BALBcJ_P0072409 Ugt2b34 protein_coding protein_coding MGP_BALBcJ_T0015098.1 MGP_BALBcJ_G0013195.1 mouse_genomes_project 5 109028169 109028542 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015063.1 MGP_BALBcJ_G0013160.1 mouse_genomes_project 5 100028510 100028802 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073779.1 MGP_BALBcJ_G0029955.1 mouse_genomes_project 5 115717553 115881129 - MGP_BALBcJ_P0073779 Ccdc60 protein_coding protein_coding MGP_BALBcJ_T0073780.1 MGP_BALBcJ_G0029955.1 mouse_genomes_project 5 115760097 115881107 - MGP_BALBcJ_P0073780 Ccdc60 protein_coding protein_coding MGP_BALBcJ_T0008039.1 MGP_BALBcJ_G0006559.1 mouse_genomes_project 5 21325341 21338103 + lincRNA lincRNA MGP_BALBcJ_T0076056.1 MGP_BALBcJ_G0030388.1 mouse_genomes_project 5 150154209 150241447 + MGP_BALBcJ_P0076056 B3glct protein_coding protein_coding MGP_BALBcJ_T0076057.1 MGP_BALBcJ_G0030388.1 mouse_genomes_project 5 150218119 150229972 + B3glct protein_coding processed_transcript MGP_BALBcJ_T0076058.1 MGP_BALBcJ_G0030388.1 mouse_genomes_project 5 150232773 150239457 + B3glct protein_coding retained_intron MGP_BALBcJ_T0075926.1 MGP_BALBcJ_G0030365.1 mouse_genomes_project 5 147392596 147453737 - MGP_BALBcJ_P0075926 Lnx2 protein_coding protein_coding MGP_BALBcJ_T0075927.1 MGP_BALBcJ_G0030365.1 mouse_genomes_project 5 147394206 147394978 - Lnx2 protein_coding processed_transcript MGP_BALBcJ_T0075494.1 MGP_BALBcJ_G0030267.1 mouse_genomes_project 5 139456436 139458522 + Cyp2w1 protein_coding retained_intron MGP_BALBcJ_T0075495.1 MGP_BALBcJ_G0030267.1 mouse_genomes_project 5 139456436 139460933 + MGP_BALBcJ_P0075495 Cyp2w1 protein_coding protein_coding MGP_BALBcJ_T0075496.1 MGP_BALBcJ_G0030267.1 mouse_genomes_project 5 139458475 139460567 + MGP_BALBcJ_P0075496 Cyp2w1 protein_coding protein_coding MGP_BALBcJ_T0018136.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109602448 109610578 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0018137.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109603060 109624581 - Gm15787 processed_transcript processed_transcript MGP_BALBcJ_T0018138.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109610588 109624520 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0018139.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109615719 109624581 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0018140.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109616406 109624543 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0018141.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109616468 109618107 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0018142.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109617808 109624581 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0018143.1 MGP_BALBcJ_G0015548.1 mouse_genomes_project 5 109618331 109624517 - Gm15787 processed_transcript antisense MGP_BALBcJ_T0008176.1 MGP_BALBcJ_G0006661.1 mouse_genomes_project 5 89193093 89196717 + Gm43086 lincRNA lincRNA MGP_BALBcJ_T0070424.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21879553 21886118 + MGP_BALBcJ_P0070424 Abcb8 protein_coding protein_coding MGP_BALBcJ_T0070425.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21879566 21895950 + MGP_BALBcJ_P0070425 Abcb8 protein_coding protein_coding MGP_BALBcJ_T0070426.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21880043 21895841 + MGP_BALBcJ_P0070426 Abcb8 protein_coding protein_coding MGP_BALBcJ_T0070427.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21880284 21889873 + Abcb8 protein_coding processed_transcript MGP_BALBcJ_T0070428.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21880296 21886561 + Abcb8 protein_coding retained_intron MGP_BALBcJ_T0070429.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21886493 21895843 + MGP_BALBcJ_P0070429 Abcb8 protein_coding protein_coding MGP_BALBcJ_T0070430.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21888149 21892607 + Abcb8 protein_coding retained_intron MGP_BALBcJ_T0070431.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21891710 21895842 + Abcb8 protein_coding retained_intron MGP_BALBcJ_T0070432.1 MGP_BALBcJ_G0029317.1 mouse_genomes_project 5 21892303 21895820 + MGP_BALBcJ_P0070432 Abcb8 protein_coding protein_coding MGP_BALBcJ_T0071147.1 MGP_BALBcJ_G0029438.1 mouse_genomes_project 5 31888852 31981135 - MGP_BALBcJ_P0071147 Zfyve28 protein_coding protein_coding MGP_BALBcJ_T0071148.1 MGP_BALBcJ_G0029438.1 mouse_genomes_project 5 31911831 31926705 - Zfyve28 protein_coding retained_intron MGP_BALBcJ_T0071149.1 MGP_BALBcJ_G0029438.1 mouse_genomes_project 5 31911916 31927167 - Zfyve28 protein_coding processed_transcript MGP_BALBcJ_T0071150.1 MGP_BALBcJ_G0029438.1 mouse_genomes_project 5 31916122 31937710 - Zfyve28 protein_coding retained_intron MGP_BALBcJ_T0071151.1 MGP_BALBcJ_G0029438.1 mouse_genomes_project 5 31920737 31981258 - Zfyve28 protein_coding processed_transcript MGP_BALBcJ_T0071152.1 MGP_BALBcJ_G0029438.1 mouse_genomes_project 5 31928560 31981246 - MGP_BALBcJ_P0071152 Zfyve28 protein_coding protein_coding MGP_BALBcJ_T0072390.1 MGP_BALBcJ_G0029647.1 mouse_genomes_project 5 84661339 84693158 - MGP_BALBcJ_P0072390 Tmprss11g protein_coding protein_coding MGP_BALBcJ_T0072391.1 MGP_BALBcJ_G0029647.1 mouse_genomes_project 5 84661830 84693129 - MGP_BALBcJ_P0072391 Tmprss11g protein_coding protein_coding MGP_BALBcJ_T0072392.1 MGP_BALBcJ_G0029647.1 mouse_genomes_project 5 84663818 84666104 - Tmprss11g protein_coding retained_intron MGP_BALBcJ_T0001718.1 MGP_BALBcJ_G0001633.1 mouse_genomes_project 5 95533785 95537019 + TEC TEC MGP_BALBcJ_T0073825.1 MGP_BALBcJ_G0029964.1 mouse_genomes_project 5 117016431 117161739 + Ksr2 protein_coding retained_intron MGP_BALBcJ_T0073826.1 MGP_BALBcJ_G0029964.1 mouse_genomes_project 5 117016431 117385437 + MGP_BALBcJ_P0073826 Ksr2 protein_coding protein_coding MGP_BALBcJ_T0073827.1 MGP_BALBcJ_G0029964.1 mouse_genomes_project 5 117017252 117375969 + MGP_BALBcJ_P0073827 Ksr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0015172.1 MGP_BALBcJ_G0013269.1 mouse_genomes_project 5 145488717 145490047 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074683.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129813850 129826973 - MGP_BALBcJ_P0074683 Asl protein_coding protein_coding MGP_BALBcJ_T0074684.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129814084 129817352 - MGP_BALBcJ_P0074684 Asl protein_coding protein_coding MGP_BALBcJ_T0074685.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129814085 129831831 - MGP_BALBcJ_P0074685 Asl protein_coding protein_coding MGP_BALBcJ_T0074686.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129814094 129827597 - MGP_BALBcJ_P0074686 Asl protein_coding protein_coding MGP_BALBcJ_T0074687.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129816076 129826892 - MGP_BALBcJ_P0074687 Asl protein_coding protein_coding MGP_BALBcJ_T0074688.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129819379 129826965 - Asl protein_coding processed_transcript MGP_BALBcJ_T0074689.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129822319 129826909 - MGP_BALBcJ_P0074689 Asl protein_coding protein_coding MGP_BALBcJ_T0074690.1 MGP_BALBcJ_G0030116.1 mouse_genomes_project 5 129824888 129826937 - Asl protein_coding retained_intron MGP_BALBcJ_T0004648.1 MGP_BALBcJ_G0004025.1 mouse_genomes_project 5 31915315 31920136 + Gm42848 antisense antisense MGP_BALBcJ_T0008099.1 MGP_BALBcJ_G0006599.1 mouse_genomes_project 5 42057719 42072539 - Gm42985 lincRNA lincRNA MGP_BALBcJ_T0072356.1 MGP_BALBcJ_G0029638.1 mouse_genomes_project 5 81399895 81485524 - MGP_BALBcJ_P0072356 Tecrl protein_coding protein_coding MGP_BALBcJ_T0072357.1 MGP_BALBcJ_G0029638.1 mouse_genomes_project 5 81414605 81485285 - MGP_BALBcJ_P0072357 Tecrl protein_coding protein_coding MGP_BALBcJ_T0014881.1 MGP_BALBcJ_G0012978.1 mouse_genomes_project 5 21573851 21574336 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001855.1 MGP_BALBcJ_G0001769.1 mouse_genomes_project 5 131795157 131798994 - TEC TEC MGP_BALBcJ_T0071178.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32220037 32245912 + MGP_BALBcJ_P0071178 Sh3bp2 protein_coding protein_coding MGP_BALBcJ_T0071179.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32220045 32257853 + MGP_BALBcJ_P0071179 Sh3bp2 protein_coding protein_coding MGP_BALBcJ_T0071180.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32237564 32251933 + Sh3bp2 protein_coding retained_intron MGP_BALBcJ_T0071181.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32237564 32246958 + MGP_BALBcJ_P0071181 Sh3bp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071182.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32237564 32257837 + MGP_BALBcJ_P0071182 Sh3bp2 protein_coding protein_coding MGP_BALBcJ_T0071183.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32243775 32257837 + MGP_BALBcJ_P0071183 Sh3bp2 protein_coding protein_coding MGP_BALBcJ_T0071184.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32243887 32257850 + MGP_BALBcJ_P0071184 Sh3bp2 protein_coding protein_coding MGP_BALBcJ_T0071185.1 MGP_BALBcJ_G0029443.1 mouse_genomes_project 5 32245756 32247004 + Sh3bp2 protein_coding retained_intron MGP_BALBcJ_T0075423.1 MGP_BALBcJ_G0030256.1 mouse_genomes_project 5 138703437 138704379 - Zfp68 protein_coding processed_transcript MGP_BALBcJ_T0075424.1 MGP_BALBcJ_G0030256.1 mouse_genomes_project 5 138703560 138717000 - MGP_BALBcJ_P0075424 Zfp68 protein_coding protein_coding MGP_BALBcJ_T0075425.1 MGP_BALBcJ_G0030256.1 mouse_genomes_project 5 138709429 138716930 - MGP_BALBcJ_P0075425 Zfp68 protein_coding protein_coding MGP_BALBcJ_T0075426.1 MGP_BALBcJ_G0030256.1 mouse_genomes_project 5 138713474 138717015 - Zfp68 protein_coding retained_intron MGP_BALBcJ_T0008326.1 MGP_BALBcJ_G0006765.1 mouse_genomes_project 5 119606195 119610346 + Gm43277 lincRNA lincRNA MGP_BALBcJ_T0004764.1 MGP_BALBcJ_G0004114.1 mouse_genomes_project 5 114463082 114469710 - Gm13822 antisense antisense MGP_BALBcJ_T0071669.1 MGP_BALBcJ_G0029521.1 mouse_genomes_project 5 50012044 50019683 + MGP_BALBcJ_P0071669 Sod3 protein_coding protein_coding MGP_BALBcJ_T0073835.1 MGP_BALBcJ_G0029966.1 mouse_genomes_project 5 117592648 117626277 + MGP_BALBcJ_P0073835 Fbxo21 protein_coding protein_coding MGP_BALBcJ_T0073836.1 MGP_BALBcJ_G0029966.1 mouse_genomes_project 5 117592692 117603770 + Fbxo21 protein_coding retained_intron MGP_BALBcJ_T0073837.1 MGP_BALBcJ_G0029966.1 mouse_genomes_project 5 117592702 117626276 + MGP_BALBcJ_P0073837 Fbxo21 protein_coding protein_coding MGP_BALBcJ_T0073838.1 MGP_BALBcJ_G0029966.1 mouse_genomes_project 5 117592746 117626278 + MGP_BALBcJ_P0073838 Fbxo21 protein_coding protein_coding MGP_BALBcJ_T0073839.1 MGP_BALBcJ_G0029966.1 mouse_genomes_project 5 117593232 117602423 + Fbxo21 protein_coding processed_transcript MGP_BALBcJ_T0073840.1 MGP_BALBcJ_G0029966.1 mouse_genomes_project 5 117595518 117602309 + Fbxo21 protein_coding processed_transcript MGP_BALBcJ_T0008211.1 MGP_BALBcJ_G0006688.1 mouse_genomes_project 5 99635442 99639145 - Gm36793 lincRNA lincRNA MGP_BALBcJ_T0001516.1 MGP_BALBcJ_G0001434.1 mouse_genomes_project 5 37253225 37256643 - TEC TEC MGP_BALBcJ_T0074387.1 MGP_BALBcJ_G0030063.1 mouse_genomes_project 5 123870270 123904711 - MGP_BALBcJ_P0074387 Abcb9 protein_coding protein_coding MGP_BALBcJ_T0074388.1 MGP_BALBcJ_G0030063.1 mouse_genomes_project 5 123871163 123888087 - Abcb9 protein_coding retained_intron MGP_BALBcJ_T0074389.1 MGP_BALBcJ_G0030063.1 mouse_genomes_project 5 123880665 123899211 - MGP_BALBcJ_P0074389 Abcb9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074390.1 MGP_BALBcJ_G0030063.1 mouse_genomes_project 5 123880669 123899211 - MGP_BALBcJ_P0074390 Abcb9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074391.1 MGP_BALBcJ_G0030063.1 mouse_genomes_project 5 123885073 123888776 - Abcb9 protein_coding processed_transcript MGP_BALBcJ_T0074392.1 MGP_BALBcJ_G0030063.1 mouse_genomes_project 5 123896883 123904699 - Abcb9 protein_coding retained_intron MGP_BALBcJ_T0014839.1 MGP_BALBcJ_G0012936.1 mouse_genomes_project 5 7796463 7796719 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074995.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135685883 135697823 + MGP_BALBcJ_P0074995 Mdh2 protein_coding protein_coding MGP_BALBcJ_T0074996.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135686039 135687657 + Mdh2 protein_coding retained_intron MGP_BALBcJ_T0074997.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135686065 135697830 + MGP_BALBcJ_P0074997 Mdh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074998.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135686080 135692041 + Mdh2 protein_coding retained_intron MGP_BALBcJ_T0074999.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135686088 135695078 + MGP_BALBcJ_P0074999 Mdh2 protein_coding protein_coding MGP_BALBcJ_T0075000.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135686092 135693773 + MGP_BALBcJ_P0075000 Mdh2 protein_coding protein_coding MGP_BALBcJ_T0075001.1 MGP_BALBcJ_G0030168.1 mouse_genomes_project 5 135686125 135691168 + Mdh2 protein_coding retained_intron MGP_BALBcJ_T0015138.1 MGP_BALBcJ_G0013235.1 mouse_genomes_project 5 135542357 135542715 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071541.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637335 41745206 - MGP_BALBcJ_P0071541 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071542.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637337 41648978 - MGP_BALBcJ_P0071542 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071543.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637337 41745284 - MGP_BALBcJ_P0071543 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071544.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637337 41742476 - MGP_BALBcJ_P0071544 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071545.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637337 41744933 - MGP_BALBcJ_P0071545 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071546.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637340 41738018 - MGP_BALBcJ_P0071546 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071547.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41637340 41738018 - MGP_BALBcJ_P0071547 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071548.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41645249 41742443 - MGP_BALBcJ_P0071548 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071549.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41645412 41737963 - MGP_BALBcJ_P0071549 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071550.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41645412 41738018 - MGP_BALBcJ_P0071550 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071551.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41645412 41737963 - MGP_BALBcJ_P0071551 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071552.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41656660 41677445 - Prom1 protein_coding retained_intron MGP_BALBcJ_T0071553.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41671227 41689669 - MGP_BALBcJ_P0071553 Prom1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071554.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41674109 41688743 - Prom1 protein_coding retained_intron MGP_BALBcJ_T0071555.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41688118 41745210 - Prom1 protein_coding retained_intron MGP_BALBcJ_T0071556.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41691722 41710566 - Prom1 protein_coding processed_transcript MGP_BALBcJ_T0071557.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41698904 41742437 - MGP_BALBcJ_P0071557 Prom1 protein_coding protein_coding MGP_BALBcJ_T0071558.1 MGP_BALBcJ_G0029505.1 mouse_genomes_project 5 41742905 41745210 - Prom1 protein_coding processed_transcript MGP_BALBcJ_T0072426.1 MGP_BALBcJ_G0029663.1 mouse_genomes_project 5 85786336 85800699 - MGP_BALBcJ_P0072426 Sult1d1 protein_coding protein_coding MGP_BALBcJ_T0072427.1 MGP_BALBcJ_G0029663.1 mouse_genomes_project 5 85787631 85791883 - Sult1d1 protein_coding processed_transcript MGP_BALBcJ_T0075774.1 MGP_BALBcJ_G0030332.1 mouse_genomes_project 5 144344772 144348898 + MGP_BALBcJ_P0075774 Bhlha15 protein_coding protein_coding MGP_BALBcJ_T0001625.1 MGP_BALBcJ_G0001541.1 mouse_genomes_project 5 62872991 62875290 + TEC TEC MGP_BALBcJ_T0011572.1 MGP_BALBcJ_G0009697.1 mouse_genomes_project 5 29475898 29476200 + Gm24436 misc_RNA misc_RNA MGP_BALBcJ_T0098765.1 MGP_BALBcJ_G0036819.1 mouse_genomes_project 5 1973449 1973576 - Gm22897 scaRNA scaRNA MGP_BALBcJ_T0008315.1 MGP_BALBcJ_G0006756.1 mouse_genomes_project 5 118739494 118745834 + 1700081H04Rik lincRNA lincRNA MGP_BALBcJ_T0074002.1 MGP_BALBcJ_G0030006.1 mouse_genomes_project 5 121244578 121250541 - MGP_BALBcJ_P0074002 Adam1a protein_coding protein_coding MGP_BALBcJ_T0014874.1 MGP_BALBcJ_G0012971.1 mouse_genomes_project 5 20340330 20340939 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008309.1 MGP_BALBcJ_G0006751.1 mouse_genomes_project 5 116992201 116996559 + Gm15728 lincRNA lincRNA MGP_BALBcJ_T0008310.1 MGP_BALBcJ_G0006751.1 mouse_genomes_project 5 116992277 116993646 + Gm15728 lincRNA lincRNA MGP_BALBcJ_T0070657.1 MGP_BALBcJ_G0029363.1 mouse_genomes_project 5 27767530 27780186 - MGP_BALBcJ_P0070657 Adgrf3 protein_coding protein_coding MGP_BALBcJ_T0070658.1 MGP_BALBcJ_G0029363.1 mouse_genomes_project 5 27767534 27770487 - MGP_BALBcJ_P0070658 Adgrf3 protein_coding protein_coding MGP_BALBcJ_T0070659.1 MGP_BALBcJ_G0029363.1 mouse_genomes_project 5 27776379 27779051 - Adgrf3 protein_coding processed_transcript MGP_BALBcJ_T0101714.1 MGP_BALBcJ_G0039691.1 mouse_genomes_project 5 54162183 54239762 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0008180.1 MGP_BALBcJ_G0006665.1 mouse_genomes_project 5 90102963 90106294 - lincRNA lincRNA MGP_BALBcJ_T0073738.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115225934 115310641 - MGP_BALBcJ_P0073738 Ccdc64 protein_coding unknown_likely_coding MGP_BALBcJ_T0073739.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115225941 115227561 - Ccdc64 protein_coding retained_intron MGP_BALBcJ_T0073740.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115225941 115310705 - MGP_BALBcJ_P0073740 Ccdc64 protein_coding protein_coding MGP_BALBcJ_T0073741.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115225943 115230753 - MGP_BALBcJ_P0073741 Ccdc64 protein_coding protein_coding MGP_BALBcJ_T0073742.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115225946 115230748 - MGP_BALBcJ_P0073742 Ccdc64 protein_coding protein_coding MGP_BALBcJ_T0073743.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115227033 115230753 - MGP_BALBcJ_P0073743 Ccdc64 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073744.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115229585 115249217 - MGP_BALBcJ_P0073744 Ccdc64 protein_coding protein_coding MGP_BALBcJ_T0073745.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115238094 115249483 - Ccdc64 protein_coding retained_intron MGP_BALBcJ_T0073746.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115246207 115295643 - Ccdc64 protein_coding processed_transcript MGP_BALBcJ_T0073747.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115249137 115310451 - MGP_BALBcJ_P0073747 Ccdc64 protein_coding protein_coding MGP_BALBcJ_T0073748.1 MGP_BALBcJ_G0029951.1 mouse_genomes_project 5 115303547 115310512 - Ccdc64 protein_coding retained_intron MGP_BALBcJ_T0073605.1 MGP_BALBcJ_G0029925.1 mouse_genomes_project 5 114403151 114433260 + MGP_BALBcJ_P0073605 4930519G04Rik protein_coding protein_coding MGP_BALBcJ_T0073607.1 MGP_BALBcJ_G0029925.1 mouse_genomes_project 5 114409869 114426849 + 4930519G04Rik protein_coding retained_intron MGP_BALBcJ_T0073608.1 MGP_BALBcJ_G0029925.1 mouse_genomes_project 5 114413654 114429892 + MGP_BALBcJ_P0073608 4930519G04Rik protein_coding protein_coding MGP_BALBcJ_T0073609.1 MGP_BALBcJ_G0029925.1 mouse_genomes_project 5 114415611 114429892 + MGP_BALBcJ_P0073609 4930519G04Rik protein_coding protein_coding MGP_BALBcJ_T0014886.1 MGP_BALBcJ_G0012983.1 mouse_genomes_project 5 22880428 22880705 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075906.1 MGP_BALBcJ_G0030360.1 mouse_genomes_project 5 147113096 147166142 - MGP_BALBcJ_P0075906 Usp12 protein_coding protein_coding MGP_BALBcJ_T0075907.1 MGP_BALBcJ_G0030360.1 mouse_genomes_project 5 147118634 147130225 - Usp12 protein_coding processed_transcript MGP_BALBcJ_T0001609.1 MGP_BALBcJ_G0001526.1 mouse_genomes_project 5 55738439 55740301 + TEC TEC MGP_BALBcJ_T0004657.1 MGP_BALBcJ_G0004034.1 mouse_genomes_project 5 35990581 35994146 - Gm26560 antisense antisense MGP_BALBcJ_T0070407.1 MGP_BALBcJ_G0029312.1 mouse_genomes_project 5 21593039 21655978 + MGP_BALBcJ_P0070407 Klhl7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070408.1 MGP_BALBcJ_G0029312.1 mouse_genomes_project 5 21593081 21628068 + Klhl7 protein_coding retained_intron MGP_BALBcJ_T0070409.1 MGP_BALBcJ_G0029312.1 mouse_genomes_project 5 21593188 21658571 + MGP_BALBcJ_P0070409 Klhl7 protein_coding protein_coding MGP_BALBcJ_T0018161.1 MGP_BALBcJ_G0015554.1 mouse_genomes_project 5 139244056 139247174 - Gm15672 processed_transcript processed_transcript MGP_BALBcJ_T0001798.1 MGP_BALBcJ_G0001713.1 mouse_genomes_project 5 121323500 121325715 + TEC TEC MGP_BALBcJ_T0001579.1 MGP_BALBcJ_G0001496.1 mouse_genomes_project 5 47594671 47595821 - TEC TEC MGP_BALBcJ_T0099956.1 MGP_BALBcJ_G0037992.1 mouse_genomes_project 5 105027058 105027165 - Gm25672 snRNA snRNA MGP_BALBcJ_T0072595.1 MGP_BALBcJ_G0029714.1 mouse_genomes_project 5 89851932 89963410 + MGP_BALBcJ_P0072595 Parm1 protein_coding protein_coding MGP_BALBcJ_T0070672.1 MGP_BALBcJ_G0029366.1 mouse_genomes_project 5 27901805 28000008 - MGP_BALBcJ_P0070672 Otof protein_coding protein_coding MGP_BALBcJ_T0070673.1 MGP_BALBcJ_G0029366.1 mouse_genomes_project 5 27901805 27999978 - MGP_BALBcJ_P0070673 Otof protein_coding protein_coding MGP_BALBcJ_T0070674.1 MGP_BALBcJ_G0029366.1 mouse_genomes_project 5 27901811 28000008 - Otof protein_coding retained_intron MGP_BALBcJ_T0070675.1 MGP_BALBcJ_G0029366.1 mouse_genomes_project 5 27902038 27999935 - Otof protein_coding retained_intron MGP_BALBcJ_T0070676.1 MGP_BALBcJ_G0029366.1 mouse_genomes_project 5 27941426 27944579 - Otof protein_coding retained_intron MGP_BALBcJ_T0072814.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99080556 99097814 - Sec31a protein_coding retained_intron MGP_BALBcJ_T0072815.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99080556 99135857 - MGP_BALBcJ_P0072815 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072816.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99080557 99092385 - MGP_BALBcJ_P0072816 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072817.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99080561 99135798 - MGP_BALBcJ_P0072817 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072818.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99080915 99114803 - MGP_BALBcJ_P0072818 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072819.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99081053 99083178 - Sec31a protein_coding retained_intron MGP_BALBcJ_T0072820.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99081118 99101748 - MGP_BALBcJ_P0072820 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072821.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99084661 99097900 - MGP_BALBcJ_P0072821 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072822.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99101779 99111516 - MGP_BALBcJ_P0072822 Sec31a protein_coding protein_coding MGP_BALBcJ_T0072823.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99120334 99124463 - Sec31a protein_coding processed_transcript MGP_BALBcJ_T0072824.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99126573 99128504 - Sec31a protein_coding retained_intron MGP_BALBcJ_T0072825.1 MGP_BALBcJ_G0029761.1 mouse_genomes_project 5 99135031 99135789 - Sec31a protein_coding retained_intron MGP_BALBcJ_T0072045.1 MGP_BALBcJ_G0029587.1 mouse_genomes_project 5 70036188 70047801 - MGP_BALBcJ_P0072045 Commd8 protein_coding protein_coding MGP_BALBcJ_T0072046.1 MGP_BALBcJ_G0029587.1 mouse_genomes_project 5 70036798 70047776 - MGP_BALBcJ_P0072046 Commd8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072047.1 MGP_BALBcJ_G0029587.1 mouse_genomes_project 5 70038624 70040752 - Commd8 protein_coding retained_intron MGP_BALBcJ_T0072048.1 MGP_BALBcJ_G0029587.1 mouse_genomes_project 5 70039489 70045332 - Commd8 protein_coding processed_transcript MGP_BALBcJ_T0072049.1 MGP_BALBcJ_G0029587.1 mouse_genomes_project 5 70040575 70047768 - MGP_BALBcJ_P0072049 Commd8 protein_coding protein_coding MGP_BALBcJ_T0073295.1 MGP_BALBcJ_G0029866.1 mouse_genomes_project 5 110107316 110112336 - MGP_BALBcJ_P0073295 Noc4l protein_coding protein_coding MGP_BALBcJ_T0073296.1 MGP_BALBcJ_G0029866.1 mouse_genomes_project 5 110107745 110108916 - Noc4l protein_coding retained_intron MGP_BALBcJ_T0073297.1 MGP_BALBcJ_G0029866.1 mouse_genomes_project 5 110109968 110112175 - Noc4l protein_coding retained_intron MGP_BALBcJ_T0073298.1 MGP_BALBcJ_G0029866.1 mouse_genomes_project 5 110110142 110112267 - Noc4l protein_coding retained_intron MGP_BALBcJ_T0073299.1 MGP_BALBcJ_G0029866.1 mouse_genomes_project 5 110110262 110112285 - Noc4l protein_coding retained_intron MGP_BALBcJ_T0073300.1 MGP_BALBcJ_G0029866.1 mouse_genomes_project 5 110111920 110112299 - Noc4l protein_coding retained_intron MGP_BALBcJ_T0014822.1 MGP_BALBcJ_G0012919.1 mouse_genomes_project 5 1745656 1746488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014866.1 MGP_BALBcJ_G0012963.1 mouse_genomes_project 5 19269539 19269824 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015069.1 MGP_BALBcJ_G0013166.1 mouse_genomes_project 5 102375213 102375789 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015016.1 MGP_BALBcJ_G0013113.1 mouse_genomes_project 5 75966620 75966957 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001688.1 MGP_BALBcJ_G0001603.1 mouse_genomes_project 5 72014210 72019410 - TEC TEC MGP_BALBcJ_T0072996.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104831863 104870082 + MGP_BALBcJ_P0072996 Zfp326 protein_coding protein_coding MGP_BALBcJ_T0072997.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104831866 104871120 + Zfp326 protein_coding retained_intron MGP_BALBcJ_T0072998.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104831866 104843356 + Zfp326 protein_coding retained_intron MGP_BALBcJ_T0072999.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104831866 104871120 + MGP_BALBcJ_P0072999 Zfp326 protein_coding protein_coding MGP_BALBcJ_T0073000.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104831874 104870479 + MGP_BALBcJ_P0073000 Zfp326 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073001.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104832269 104841519 + Zfp326 protein_coding processed_transcript MGP_BALBcJ_T0073002.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104834098 104862870 + Zfp326 protein_coding retained_intron MGP_BALBcJ_T0073003.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104846276 104851731 + Zfp326 protein_coding retained_intron MGP_BALBcJ_T0073004.1 MGP_BALBcJ_G0029804.1 mouse_genomes_project 5 104860208 104863283 + Zfp326 protein_coding retained_intron MGP_BALBcJ_T0010659.1 MGP_BALBcJ_G0008784.1 mouse_genomes_project 5 39561188 39561270 + Mir6414 miRNA miRNA MGP_BALBcJ_T0010683.1 MGP_BALBcJ_G0008808.1 mouse_genomes_project 5 105849694 105849793 - Gm27527 miRNA miRNA MGP_BALBcJ_T0001454.1 MGP_BALBcJ_G0001375.1 mouse_genomes_project 5 11895855 11899144 + TEC TEC MGP_BALBcJ_T0001759.1 MGP_BALBcJ_G0001674.1 mouse_genomes_project 5 112584822 112585386 + TEC TEC MGP_BALBcJ_T0001646.1 MGP_BALBcJ_G0001562.1 mouse_genomes_project 5 64012798 64017048 - TEC TEC MGP_BALBcJ_T0008419.1 MGP_BALBcJ_G0006826.1 mouse_genomes_project 5 147083815 147084690 + 4930573C15Rik lincRNA lincRNA MGP_BALBcJ_T0004736.1 MGP_BALBcJ_G0004092.1 mouse_genomes_project 5 101198327 101207706 - 1700013M08Rik antisense antisense MGP_BALBcJ_T0004737.1 MGP_BALBcJ_G0004092.1 mouse_genomes_project 5 101203615 101204413 - 1700013M08Rik antisense antisense MGP_BALBcJ_T0004801.1 MGP_BALBcJ_G0004140.1 mouse_genomes_project 5 122774059 122781879 - Gm2479 antisense antisense MGP_BALBcJ_T0004802.1 MGP_BALBcJ_G0004140.1 mouse_genomes_project 5 122774224 122779677 - Gm2479 antisense antisense MGP_BALBcJ_T0018108.1 MGP_BALBcJ_G0015537.1 mouse_genomes_project 5 50640748 50663154 - 5033403H07Rik processed_transcript lincRNA MGP_BALBcJ_T0018109.1 MGP_BALBcJ_G0015537.1 mouse_genomes_project 5 50640760 50661015 - 5033403H07Rik processed_transcript lincRNA MGP_BALBcJ_T0018110.1 MGP_BALBcJ_G0015537.1 mouse_genomes_project 5 50659149 50661066 - 5033403H07Rik processed_transcript retained_intron MGP_BALBcJ_T0073205.1 MGP_BALBcJ_G0029843.1 mouse_genomes_project 5 107914330 107926704 - MGP_BALBcJ_P0073205 protein_coding protein_coding MGP_BALBcJ_T0001462.1 MGP_BALBcJ_G0001383.1 mouse_genomes_project 5 13942049 13943042 + TEC TEC MGP_BALBcJ_T0101921.1 MGP_BALBcJ_G0039800.1 mouse_genomes_project 5 72329184 72332205 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0001720.1 MGP_BALBcJ_G0001635.1 mouse_genomes_project 5 95593279 95593799 + TEC TEC MGP_BALBcJ_T0008014.1 MGP_BALBcJ_G0006542.1 mouse_genomes_project 5 4714225 4977424 - lincRNA lincRNA MGP_BALBcJ_T0001509.1 MGP_BALBcJ_G0001427.1 mouse_genomes_project 5 33256624 33257270 - TEC TEC MGP_BALBcJ_T0071581.1 MGP_BALBcJ_G0029510.1 mouse_genomes_project 5 43146207 43165491 + MGP_BALBcJ_P0071581 Lap3 protein_coding protein_coding MGP_BALBcJ_T0071582.1 MGP_BALBcJ_G0029510.1 mouse_genomes_project 5 43146337 43153581 + Lap3 protein_coding retained_intron MGP_BALBcJ_T0071583.1 MGP_BALBcJ_G0029510.1 mouse_genomes_project 5 43146359 43156219 + MGP_BALBcJ_P0071583 Lap3 protein_coding protein_coding MGP_BALBcJ_T0071584.1 MGP_BALBcJ_G0029510.1 mouse_genomes_project 5 43151064 43157668 + Lap3 protein_coding retained_intron MGP_BALBcJ_T0071585.1 MGP_BALBcJ_G0029510.1 mouse_genomes_project 5 43153174 43157639 + Lap3 protein_coding retained_intron MGP_BALBcJ_T0071586.1 MGP_BALBcJ_G0029510.1 mouse_genomes_project 5 43162008 43164173 + Lap3 protein_coding retained_intron MGP_BALBcJ_T0075367.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138152606 138161196 - MGP_BALBcJ_P0075367 Taf6 protein_coding protein_coding MGP_BALBcJ_T0075368.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138152606 138161421 - MGP_BALBcJ_P0075368 Taf6 protein_coding protein_coding MGP_BALBcJ_T0075369.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138152609 138161175 - MGP_BALBcJ_P0075369 Taf6 protein_coding protein_coding MGP_BALBcJ_T0075370.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138152617 138161191 - MGP_BALBcJ_P0075370 Taf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075371.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138154125 138155446 - Taf6 protein_coding retained_intron MGP_BALBcJ_T0075372.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138156652 138161196 - MGP_BALBcJ_P0075372 Taf6 protein_coding protein_coding MGP_BALBcJ_T0075373.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138157892 138161185 - MGP_BALBcJ_P0075373 Taf6 protein_coding protein_coding MGP_BALBcJ_T0075374.1 MGP_BALBcJ_G0030241.1 mouse_genomes_project 5 138160047 138161186 - Taf6 protein_coding processed_transcript MGP_BALBcJ_T0008072.1 MGP_BALBcJ_G0006582.1 mouse_genomes_project 5 34148474 34166125 - 2210406O10Rik lincRNA lincRNA MGP_BALBcJ_T0008073.1 MGP_BALBcJ_G0006582.1 mouse_genomes_project 5 34156060 34166116 - 2210406O10Rik lincRNA lincRNA MGP_BALBcJ_T0008074.1 MGP_BALBcJ_G0006582.1 mouse_genomes_project 5 34156863 34166115 - 2210406O10Rik lincRNA lincRNA MGP_BALBcJ_T0008075.1 MGP_BALBcJ_G0006582.1 mouse_genomes_project 5 34159362 34166157 - 2210406O10Rik lincRNA lincRNA MGP_BALBcJ_T0014969.1 MGP_BALBcJ_G0013066.1 mouse_genomes_project 5 57843011 57843205 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008231.1 MGP_BALBcJ_G0006702.1 mouse_genomes_project 5 105303754 105316550 + Gm42914 lincRNA lincRNA MGP_BALBcJ_T0014878.1 MGP_BALBcJ_G0012975.1 mouse_genomes_project 5 20836811 20836935 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015073.1 MGP_BALBcJ_G0013170.1 mouse_genomes_project 5 104821687 104822153 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008316.1 MGP_BALBcJ_G0006757.1 mouse_genomes_project 5 118825177 118831131 - Gm7538 lincRNA lincRNA MGP_BALBcJ_T0072513.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87259177 87614099 + MGP_BALBcJ_P0072513 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0072514.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87259620 87260638 + Slc4a4 protein_coding processed_transcript MGP_BALBcJ_T0072515.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87259656 87609304 + MGP_BALBcJ_P0072515 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0072516.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87259658 87610231 + MGP_BALBcJ_P0072516 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0072517.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87310193 87330352 + MGP_BALBcJ_P0072517 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0072518.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87401564 87609298 + MGP_BALBcJ_P0072518 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0072519.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87401675 87415835 + MGP_BALBcJ_P0072519 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0072520.1 MGP_BALBcJ_G0029690.1 mouse_genomes_project 5 87401690 87492526 + MGP_BALBcJ_P0072520 Slc4a4 protein_coding protein_coding MGP_BALBcJ_T0010670.1 MGP_BALBcJ_G0008795.1 mouse_genomes_project 5 73145262 73145336 + Mir7025 miRNA miRNA MGP_BALBcJ_T0072783.1 MGP_BALBcJ_G0029755.1 mouse_genomes_project 5 97985571 98423500 - MGP_BALBcJ_P0072783 protein_coding protein_coding MGP_BALBcJ_T0072784.1 MGP_BALBcJ_G0029755.1 mouse_genomes_project 5 98062015 98423517 - MGP_BALBcJ_P0072784 protein_coding protein_coding MGP_BALBcJ_T0072785.1 MGP_BALBcJ_G0029755.1 mouse_genomes_project 5 98246778 98423520 - protein_coding retained_intron MGP_BALBcJ_T0072786.1 MGP_BALBcJ_G0029755.1 mouse_genomes_project 5 98373687 98423276 - protein_coding processed_transcript MGP_BALBcJ_T0072787.1 MGP_BALBcJ_G0029755.1 mouse_genomes_project 5 98417921 98423511 - MGP_BALBcJ_P0072787 protein_coding protein_coding MGP_BALBcJ_T0001586.1 MGP_BALBcJ_G0001503.1 mouse_genomes_project 5 49489701 49493719 - TEC TEC MGP_BALBcJ_T0001861.1 MGP_BALBcJ_G0001775.1 mouse_genomes_project 5 132184920 132187217 - TEC TEC MGP_BALBcJ_T0074018.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121295901 121323630 - MGP_BALBcJ_P0074018 Aldh2 protein_coding protein_coding MGP_BALBcJ_T0074019.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121297746 121301053 - Aldh2 protein_coding retained_intron MGP_BALBcJ_T0074020.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121297747 121309532 - MGP_BALBcJ_P0074020 Aldh2 protein_coding protein_coding MGP_BALBcJ_T0074021.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121297825 121302704 - MGP_BALBcJ_P0074021 Aldh2 protein_coding protein_coding MGP_BALBcJ_T0074022.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121300181 121323386 - MGP_BALBcJ_P0074022 Aldh2 protein_coding protein_coding MGP_BALBcJ_T0074023.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121301337 121304993 - Aldh2 protein_coding retained_intron MGP_BALBcJ_T0074024.1 MGP_BALBcJ_G0030009.1 mouse_genomes_project 5 121306322 121323388 - MGP_BALBcJ_P0074024 Aldh2 protein_coding protein_coding MGP_BALBcJ_T0001485.1 MGP_BALBcJ_G0001405.1 mouse_genomes_project 5 28440751 28442997 + TEC TEC MGP_BALBcJ_T0001891.1 MGP_BALBcJ_G0001804.1 mouse_genomes_project 5 143511446 143512472 + TEC TEC MGP_BALBcJ_T0098620.1 MGP_BALBcJ_G0036674.1 mouse_genomes_project 5 131394646 131394769 + Gm27266 rRNA rRNA MGP_BALBcJ_T0075792.1 MGP_BALBcJ_G0030337.1 mouse_genomes_project 5 144934876 144961553 - MGP_BALBcJ_P0075792 Tmem130 protein_coding protein_coding MGP_BALBcJ_T0075793.1 MGP_BALBcJ_G0030337.1 mouse_genomes_project 5 144951787 144961722 - Tmem130 protein_coding processed_transcript MGP_BALBcJ_T0015148.1 MGP_BALBcJ_G0013245.1 mouse_genomes_project 5 137855890 137856642 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001636.1 MGP_BALBcJ_G0001552.1 mouse_genomes_project 5 63589906 63591458 - TEC TEC MGP_BALBcJ_T0099899.1 MGP_BALBcJ_G0037935.1 mouse_genomes_project 5 3440935 3441028 + Gm24686 snRNA snRNA MGP_BALBcJ_T0014994.1 MGP_BALBcJ_G0013091.1 mouse_genomes_project 5 67378634 67379226 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070984.1 MGP_BALBcJ_G0029412.1 mouse_genomes_project 5 30067601 30103683 + MGP_BALBcJ_P0070984 Ppp1cb protein_coding protein_coding MGP_BALBcJ_T0070985.1 MGP_BALBcJ_G0029412.1 mouse_genomes_project 5 30067910 30128903 + MGP_BALBcJ_P0070985 Ppp1cb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070986.1 MGP_BALBcJ_G0029412.1 mouse_genomes_project 5 30067944 30072691 + Ppp1cb protein_coding retained_intron MGP_BALBcJ_T0070987.1 MGP_BALBcJ_G0029412.1 mouse_genomes_project 5 30067980 30099199 + MGP_BALBcJ_P0070987 Ppp1cb protein_coding protein_coding MGP_BALBcJ_T0070988.1 MGP_BALBcJ_G0029412.1 mouse_genomes_project 5 30086233 30093475 + Ppp1cb protein_coding processed_transcript MGP_BALBcJ_T0070989.1 MGP_BALBcJ_G0029412.1 mouse_genomes_project 5 30094132 30100920 + MGP_BALBcJ_P0070989 Ppp1cb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015114.1 MGP_BALBcJ_G0013211.1 mouse_genomes_project 5 114824651 114824953 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073236.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583717 109584472 + MGP_BALBcJ_P0073236 Chfr protein_coding protein_coding MGP_BALBcJ_T0073237.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583724 109620182 + MGP_BALBcJ_P0073237 Chfr protein_coding protein_coding MGP_BALBcJ_T0073238.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583724 109611945 + MGP_BALBcJ_P0073238 Chfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073239.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583726 109619731 + MGP_BALBcJ_P0073239 Chfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073240.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583732 109619870 + MGP_BALBcJ_P0073240 Chfr protein_coding protein_coding MGP_BALBcJ_T0073241.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583735 109616613 + Chfr protein_coding retained_intron MGP_BALBcJ_T0073242.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583735 109620183 + MGP_BALBcJ_P0073242 Chfr protein_coding protein_coding MGP_BALBcJ_T0073243.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583753 109620180 + MGP_BALBcJ_P0073243 Chfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073244.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583782 109594479 + MGP_BALBcJ_P0073244 Chfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073245.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109583800 109591586 + MGP_BALBcJ_P0073245 Chfr protein_coding protein_coding MGP_BALBcJ_T0073246.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109602882 109611092 + Chfr protein_coding retained_intron MGP_BALBcJ_T0073247.1 MGP_BALBcJ_G0029856.1 mouse_genomes_project 5 109611943 109619216 + Chfr protein_coding retained_intron MGP_BALBcJ_T0008296.1 MGP_BALBcJ_G0006741.1 mouse_genomes_project 5 114923097 114960970 + Gm13832 lincRNA lincRNA MGP_BALBcJ_T0008297.1 MGP_BALBcJ_G0006741.1 mouse_genomes_project 5 114923116 114987201 + Gm13832 lincRNA lincRNA MGP_BALBcJ_T0004868.1 MGP_BALBcJ_G0004185.1 mouse_genomes_project 5 147783795 147786171 + Gm26597 antisense antisense MGP_BALBcJ_T0072379.1 MGP_BALBcJ_G0029642.1 mouse_genomes_project 5 84291260 84352684 - MGP_BALBcJ_P0072379 Uba6 protein_coding protein_coding MGP_BALBcJ_T0072380.1 MGP_BALBcJ_G0029642.1 mouse_genomes_project 5 84299459 84352685 - Uba6 protein_coding retained_intron MGP_BALBcJ_T0010668.1 MGP_BALBcJ_G0008793.1 mouse_genomes_project 5 64997801 64997915 - Gm23841 miRNA miRNA MGP_BALBcJ_T0001736.1 MGP_BALBcJ_G0001651.1 mouse_genomes_project 5 102818767 102821028 - TEC TEC MGP_BALBcJ_T0004774.1 MGP_BALBcJ_G0004121.1 mouse_genomes_project 5 116034577 116060035 + Srrm4os antisense antisense MGP_BALBcJ_T0004775.1 MGP_BALBcJ_G0004121.1 mouse_genomes_project 5 116034577 116063425 + Srrm4os antisense antisense MGP_BALBcJ_T0014896.1 MGP_BALBcJ_G0012993.1 mouse_genomes_project 5 25351815 25352296 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001441.1 MGP_BALBcJ_G0001362.1 mouse_genomes_project 5 6634543 6640334 - TEC TEC MGP_BALBcJ_T0073145.1 MGP_BALBcJ_G0029832.1 mouse_genomes_project 5 107445449 107453931 - MGP_BALBcJ_P0073145 Mfsd7a protein_coding protein_coding MGP_BALBcJ_T0001769.1 MGP_BALBcJ_G0001684.1 mouse_genomes_project 5 114524774 114525332 + TEC TEC MGP_BALBcJ_T0099972.1 MGP_BALBcJ_G0038008.1 mouse_genomes_project 5 126168497 126168604 - Gm23151 snRNA snRNA MGP_BALBcJ_T0014836.1 MGP_BALBcJ_G0012933.1 mouse_genomes_project 5 7160123 7161588 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008282.1 MGP_BALBcJ_G0006732.1 mouse_genomes_project 5 112052682 112059741 - 1700034G24Rik lincRNA lincRNA MGP_BALBcJ_T0008283.1 MGP_BALBcJ_G0006732.1 mouse_genomes_project 5 112052771 112059741 - 1700034G24Rik lincRNA lincRNA MGP_BALBcJ_T0074079.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121860752 121866637 + MGP_BALBcJ_P0074079 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074080.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121860758 121865076 + MGP_BALBcJ_P0074080 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074081.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121860781 121864688 + MGP_BALBcJ_P0074081 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074082.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121860784 121873215 + MGP_BALBcJ_P0074082 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074083.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121860833 121864819 + MGP_BALBcJ_P0074083 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074084.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121860962 121862555 + Myl2 protein_coding processed_transcript MGP_BALBcJ_T0074085.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121861186 121864671 + MGP_BALBcJ_P0074085 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074086.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121861381 121863711 + MGP_BALBcJ_P0074086 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074087.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121861598 121864489 + MGP_BALBcJ_P0074087 Myl2 protein_coding protein_coding MGP_BALBcJ_T0074088.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121862981 121866631 + Myl2 protein_coding processed_transcript MGP_BALBcJ_T0074089.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121862983 121866637 + Myl2 protein_coding processed_transcript MGP_BALBcJ_T0074090.1 MGP_BALBcJ_G0030017.1 mouse_genomes_project 5 121863695 121864786 + MGP_BALBcJ_P0074090 Myl2 protein_coding protein_coding MGP_BALBcJ_T0073649.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114730509 114756193 - MGP_BALBcJ_P0073649 Cabp1 protein_coding protein_coding MGP_BALBcJ_T0073650.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114730509 114748139 - MGP_BALBcJ_P0073650 Cabp1 protein_coding protein_coding MGP_BALBcJ_T0073651.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114730534 114743262 - Cabp1 protein_coding processed_transcript MGP_BALBcJ_T0073652.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114730766 114747956 - MGP_BALBcJ_P0073652 Cabp1 protein_coding protein_coding MGP_BALBcJ_T0073653.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114730791 114747893 - MGP_BALBcJ_P0073653 Cabp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073654.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114734516 114743099 - Cabp1 protein_coding retained_intron MGP_BALBcJ_T0073655.1 MGP_BALBcJ_G0029936.1 mouse_genomes_project 5 114741718 114745987 - Cabp1 protein_coding retained_intron MGP_BALBcJ_T0001569.1 MGP_BALBcJ_G0001486.1 mouse_genomes_project 5 46739094 46741541 - TEC TEC MGP_BALBcJ_T0099923.1 MGP_BALBcJ_G0037959.1 mouse_genomes_project 5 53029665 53029827 - Gm25513 snRNA snRNA MGP_BALBcJ_T0071815.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63169817 63245067 - MGP_BALBcJ_P0071815 Rfc1 protein_coding protein_coding MGP_BALBcJ_T0071816.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63169819 63245124 - MGP_BALBcJ_P0071816 Rfc1 protein_coding protein_coding MGP_BALBcJ_T0071817.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63169819 63245173 - MGP_BALBcJ_P0071817 Rfc1 protein_coding protein_coding MGP_BALBcJ_T0071818.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63170569 63245121 - MGP_BALBcJ_P0071818 Rfc1 protein_coding protein_coding MGP_BALBcJ_T0071819.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63171043 63177444 - MGP_BALBcJ_P0071819 Rfc1 protein_coding protein_coding MGP_BALBcJ_T0071820.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63172213 63181987 - Rfc1 protein_coding retained_intron MGP_BALBcJ_T0071821.1 MGP_BALBcJ_G0029551.1 mouse_genomes_project 5 63219774 63245116 - Rfc1 protein_coding retained_intron MGP_BALBcJ_T0015079.1 MGP_BALBcJ_G0013176.1 mouse_genomes_project 5 105879188 105879431 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008219.1 MGP_BALBcJ_G0006695.1 mouse_genomes_project 5 102100226 102102619 - 5430427N15Rik lincRNA lincRNA MGP_BALBcJ_T0015020.1 MGP_BALBcJ_G0013117.1 mouse_genomes_project 5 77627704 77628815 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001546.1 MGP_BALBcJ_G0001464.1 mouse_genomes_project 5 43418430 43420588 - TEC TEC MGP_BALBcJ_T0073687.1 MGP_BALBcJ_G0029943.1 mouse_genomes_project 5 114902813 114905150 + MGP_BALBcJ_P0073687 Triap1 protein_coding protein_coding MGP_BALBcJ_T0004865.1 MGP_BALBcJ_G0004184.1 mouse_genomes_project 5 147609533 147652458 - 2210019I11Rik antisense antisense MGP_BALBcJ_T0004866.1 MGP_BALBcJ_G0004184.1 mouse_genomes_project 5 147611642 147652439 - 2210019I11Rik antisense antisense MGP_BALBcJ_T0004867.1 MGP_BALBcJ_G0004184.1 mouse_genomes_project 5 147619553 147651932 - 2210019I11Rik antisense antisense MGP_BALBcJ_T0001849.1 MGP_BALBcJ_G0001763.1 mouse_genomes_project 5 131514917 131516072 - TEC TEC MGP_BALBcJ_T0015146.1 MGP_BALBcJ_G0013243.1 mouse_genomes_project 5 137534734 137535222 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008331.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122901555 122905939 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0008333.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122902121 122907175 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0008334.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122902292 122908888 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0008335.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122902672 122909478 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0008337.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122904055 122908901 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0008338.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122905300 122908117 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0008339.1 MGP_BALBcJ_G0006769.1 mouse_genomes_project 5 122905872 122908879 - AI480526 lincRNA lincRNA MGP_BALBcJ_T0073167.1 MGP_BALBcJ_G0029836.1 mouse_genomes_project 5 107635898 107651850 + MGP_BALBcJ_P0073167 Tmem175 protein_coding protein_coding MGP_BALBcJ_T0073168.1 MGP_BALBcJ_G0029836.1 mouse_genomes_project 5 107635960 107656599 + MGP_BALBcJ_P0073168 Tmem175 protein_coding protein_coding MGP_BALBcJ_T0073169.1 MGP_BALBcJ_G0029836.1 mouse_genomes_project 5 107636130 107655079 + MGP_BALBcJ_P0073169 Tmem175 protein_coding protein_coding MGP_BALBcJ_T0073170.1 MGP_BALBcJ_G0029836.1 mouse_genomes_project 5 107636137 107654487 + MGP_BALBcJ_P0073170 Tmem175 protein_coding protein_coding MGP_BALBcJ_T0073171.1 MGP_BALBcJ_G0029836.1 mouse_genomes_project 5 107649502 107651018 + Tmem175 protein_coding retained_intron MGP_BALBcJ_T0073172.1 MGP_BALBcJ_G0029836.1 mouse_genomes_project 5 107652144 107652936 + Tmem175 protein_coding processed_transcript MGP_BALBcJ_T0008425.1 MGP_BALBcJ_G0006832.1 mouse_genomes_project 5 149142434 149149364 + Gm36186 lincRNA lincRNA MGP_BALBcJ_T0008031.1 MGP_BALBcJ_G0006555.1 mouse_genomes_project 5 20134176 20142154 - A930003O13Rik lincRNA lincRNA MGP_BALBcJ_T0008032.1 MGP_BALBcJ_G0006555.1 mouse_genomes_project 5 20134634 20137732 - A930003O13Rik lincRNA lincRNA MGP_BALBcJ_T0008033.1 MGP_BALBcJ_G0006555.1 mouse_genomes_project 5 20139285 20142174 - A930003O13Rik lincRNA lincRNA MGP_BALBcJ_T0072235.1 MGP_BALBcJ_G0029621.1 mouse_genomes_project 5 74332318 74362381 - MGP_BALBcJ_P0072235 Nmu protein_coding protein_coding MGP_BALBcJ_T0004613.1 MGP_BALBcJ_G0003996.1 mouse_genomes_project 5 555874 557820 - 4833413G10Rik antisense antisense MGP_BALBcJ_T0014843.1 MGP_BALBcJ_G0012940.1 mouse_genomes_project 5 11220865 11221376 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075217.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484111 137495649 + MGP_BALBcJ_P0075217 Actl6b protein_coding protein_coding MGP_BALBcJ_T0075218.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484132 137484941 + Actl6b protein_coding retained_intron MGP_BALBcJ_T0075219.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484132 137499077 + MGP_BALBcJ_P0075219 Actl6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075220.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484133 137498223 + MGP_BALBcJ_P0075220 Actl6b protein_coding protein_coding MGP_BALBcJ_T0075221.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484149 137485627 + MGP_BALBcJ_P0075221 Actl6b protein_coding protein_coding MGP_BALBcJ_T0075222.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484151 137487251 + Actl6b protein_coding retained_intron MGP_BALBcJ_T0075223.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484151 137501990 + MGP_BALBcJ_P0075223 Actl6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075224.1 MGP_BALBcJ_G0030209.1 mouse_genomes_project 5 137484229 137501819 + MGP_BALBcJ_P0075224 Actl6b protein_coding protein_coding MGP_BALBcJ_T0008320.1 MGP_BALBcJ_G0006761.1 mouse_genomes_project 5 119327547 119333946 - Tbx3os2 lincRNA lincRNA MGP_BALBcJ_T0098380.1 MGP_BALBcJ_G0036434.1 mouse_genomes_project 5 135799028 135800619 + pseudogene pseudogene MGP_BALBcJ_T0074649.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129607047 129621070 - MGP_BALBcJ_P0074649 Psph protein_coding protein_coding MGP_BALBcJ_T0074650.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129610730 129613022 - Psph protein_coding processed_transcript MGP_BALBcJ_T0074651.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129610806 129620859 - MGP_BALBcJ_P0074651 Psph protein_coding protein_coding MGP_BALBcJ_T0074652.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129612566 129628542 - MGP_BALBcJ_P0074652 Psph protein_coding protein_coding MGP_BALBcJ_T0074653.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129613286 129620852 - Psph protein_coding retained_intron MGP_BALBcJ_T0074654.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129618493 129628640 - Psph protein_coding retained_intron MGP_BALBcJ_T0074655.1 MGP_BALBcJ_G0030108.1 mouse_genomes_project 5 129621026 129628595 - Psph protein_coding processed_transcript MGP_BALBcJ_T0072847.1 MGP_BALBcJ_G0029765.1 mouse_genomes_project 5 99383737 99403259 - MGP_BALBcJ_P0072847 Coq2 protein_coding protein_coding MGP_BALBcJ_T0072848.1 MGP_BALBcJ_G0029765.1 mouse_genomes_project 5 99384292 99403174 - MGP_BALBcJ_P0072848 Coq2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072849.1 MGP_BALBcJ_G0029765.1 mouse_genomes_project 5 99386970 99403267 - MGP_BALBcJ_P0072849 Coq2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072876.1 MGP_BALBcJ_G0029770.1 mouse_genomes_project 5 99571769 99572867 + MGP_BALBcJ_P0072876 Agpat9 protein_coding protein_coding MGP_BALBcJ_T0072877.1 MGP_BALBcJ_G0029770.1 mouse_genomes_project 5 99572186 99624560 + MGP_BALBcJ_P0072877 Agpat9 protein_coding protein_coding MGP_BALBcJ_T0072878.1 MGP_BALBcJ_G0029770.1 mouse_genomes_project 5 99572275 99624560 + MGP_BALBcJ_P0072878 Agpat9 protein_coding protein_coding MGP_BALBcJ_T0072879.1 MGP_BALBcJ_G0029770.1 mouse_genomes_project 5 99572420 99624563 + MGP_BALBcJ_P0072879 Agpat9 protein_coding protein_coding MGP_BALBcJ_T0072880.1 MGP_BALBcJ_G0029770.1 mouse_genomes_project 5 99572473 99572907 + MGP_BALBcJ_P0072880 Agpat9 protein_coding protein_coding MGP_BALBcJ_T0008078.1 MGP_BALBcJ_G0006584.1 mouse_genomes_project 5 35481655 35482428 + Gm43763 lincRNA lincRNA MGP_BALBcJ_T0001528.1 MGP_BALBcJ_G0001446.1 mouse_genomes_project 5 41749097 41750792 + TEC TEC MGP_BALBcJ_T0072008.1 MGP_BALBcJ_G0029579.1 mouse_genomes_project 5 67422158 67441791 - MGP_BALBcJ_P0072008 Yipf7 protein_coding protein_coding MGP_BALBcJ_T0072009.1 MGP_BALBcJ_G0029579.1 mouse_genomes_project 5 67424797 67441732 - MGP_BALBcJ_P0072009 Yipf7 protein_coding protein_coding MGP_BALBcJ_T0001593.1 MGP_BALBcJ_G0001510.1 mouse_genomes_project 5 49880578 49883440 + TEC TEC MGP_BALBcJ_T0014985.1 MGP_BALBcJ_G0013082.1 mouse_genomes_project 5 62069467 62070280 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074212.1 MGP_BALBcJ_G0030035.1 mouse_genomes_project 5 122616986 122639039 + MGP_BALBcJ_P0074212 Rnf34 protein_coding protein_coding MGP_BALBcJ_T0074213.1 MGP_BALBcJ_G0030035.1 mouse_genomes_project 5 122617095 122631529 + MGP_BALBcJ_P0074213 Rnf34 protein_coding protein_coding MGP_BALBcJ_T0001630.1 MGP_BALBcJ_G0001546.1 mouse_genomes_project 5 63387759 63389311 - TEC TEC MGP_BALBcJ_T0001479.1 MGP_BALBcJ_G0001399.1 mouse_genomes_project 5 25608679 25613031 - TEC TEC MGP_BALBcJ_T0008161.1 MGP_BALBcJ_G0006649.1 mouse_genomes_project 5 75118833 75124716 - Gm15831 lincRNA lincRNA MGP_BALBcJ_T0008221.1 MGP_BALBcJ_G0006697.1 mouse_genomes_project 5 103284182 103316248 + D930016D06Rik lincRNA lincRNA MGP_BALBcJ_T0008222.1 MGP_BALBcJ_G0006697.1 mouse_genomes_project 5 103284316 103299161 + D930016D06Rik lincRNA lincRNA MGP_BALBcJ_T0008223.1 MGP_BALBcJ_G0006697.1 mouse_genomes_project 5 103301092 103313911 + D930016D06Rik lincRNA lincRNA MGP_BALBcJ_T0008224.1 MGP_BALBcJ_G0006697.1 mouse_genomes_project 5 103301638 103313321 + D930016D06Rik lincRNA lincRNA MGP_BALBcJ_T0008225.1 MGP_BALBcJ_G0006697.1 mouse_genomes_project 5 103301680 103315557 + D930016D06Rik lincRNA lincRNA MGP_BALBcJ_T0072557.1 MGP_BALBcJ_G0029699.1 mouse_genomes_project 5 88875981 88900670 + MGP_BALBcJ_P0072557 Afm protein_coding protein_coding MGP_BALBcJ_T0072558.1 MGP_BALBcJ_G0029699.1 mouse_genomes_project 5 88875998 88896182 + MGP_BALBcJ_P0072558 Afm protein_coding protein_coding MGP_BALBcJ_T0001470.1 MGP_BALBcJ_G0001391.1 mouse_genomes_project 5 20853724 20854509 + TEC TEC MGP_BALBcJ_T0008127.1 MGP_BALBcJ_G0006624.1 mouse_genomes_project 5 62360795 62367748 + C030018K13Rik lincRNA lincRNA MGP_BALBcJ_T0008128.1 MGP_BALBcJ_G0006624.1 mouse_genomes_project 5 62360801 62363528 + C030018K13Rik lincRNA lincRNA MGP_BALBcJ_T0008129.1 MGP_BALBcJ_G0006624.1 mouse_genomes_project 5 62360823 62366246 + C030018K13Rik lincRNA lincRNA MGP_BALBcJ_T0073285.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109808480 109899603 - MGP_BALBcJ_P0073285 Fbrsl1 protein_coding protein_coding MGP_BALBcJ_T0073286.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109808487 109899911 - MGP_BALBcJ_P0073286 Fbrsl1 protein_coding protein_coding MGP_BALBcJ_T0073287.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109809524 109899894 - MGP_BALBcJ_P0073287 Fbrsl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073288.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109829415 109884423 - MGP_BALBcJ_P0073288 Fbrsl1 protein_coding protein_coding MGP_BALBcJ_T0073289.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109881283 109883271 - Fbrsl1 protein_coding processed_transcript MGP_BALBcJ_T0073290.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109883403 109884730 - Fbrsl1 protein_coding processed_transcript MGP_BALBcJ_T0073291.1 MGP_BALBcJ_G0029864.1 mouse_genomes_project 5 109883403 109899911 - MGP_BALBcJ_P0073291 Fbrsl1 protein_coding protein_coding MGP_BALBcJ_T0008259.1 MGP_BALBcJ_G0006721.1 mouse_genomes_project 5 111040438 111046945 + C130026L21Rik lincRNA lincRNA MGP_BALBcJ_T0008260.1 MGP_BALBcJ_G0006721.1 mouse_genomes_project 5 111040577 111046153 + C130026L21Rik lincRNA lincRNA MGP_BALBcJ_T0008261.1 MGP_BALBcJ_G0006721.1 mouse_genomes_project 5 111040584 111041890 + C130026L21Rik lincRNA lincRNA MGP_BALBcJ_T0008262.1 MGP_BALBcJ_G0006721.1 mouse_genomes_project 5 111041447 111063897 + C130026L21Rik lincRNA lincRNA MGP_BALBcJ_T0008409.1 MGP_BALBcJ_G0006818.1 mouse_genomes_project 5 143466373 143468814 + BC030343 lincRNA lincRNA MGP_BALBcJ_T0073847.1 MGP_BALBcJ_G0029968.1 mouse_genomes_project 5 117682790 117773482 - MGP_BALBcJ_P0073847 Fbxw8 protein_coding protein_coding MGP_BALBcJ_T0073848.1 MGP_BALBcJ_G0029968.1 mouse_genomes_project 5 117694880 117773444 - Fbxw8 protein_coding retained_intron MGP_BALBcJ_T0015056.1 MGP_BALBcJ_G0013153.1 mouse_genomes_project 5 96830996 96831992 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075327.1 MGP_BALBcJ_G0030231.1 mouse_genomes_project 5 137995316 138006694 + MGP_BALBcJ_P0075327 protein_coding protein_coding MGP_BALBcJ_T0004871.1 MGP_BALBcJ_G0004188.1 mouse_genomes_project 5 149869485 149871194 - Gm43151 antisense antisense MGP_BALBcJ_T0098973.1 MGP_BALBcJ_G0037020.1 mouse_genomes_project 5 116171932 116173544 - sense_intronic sense_intronic MGP_BALBcJ_T0008267.1 MGP_BALBcJ_G0006724.1 mouse_genomes_project 5 111205356 111211172 + Gm16019 lincRNA lincRNA MGP_BALBcJ_T0075713.1 MGP_BALBcJ_G0030317.1 mouse_genomes_project 5 143601652 143618992 + MGP_BALBcJ_P0075713 Kdelr2 protein_coding protein_coding MGP_BALBcJ_T0014993.1 MGP_BALBcJ_G0013090.1 mouse_genomes_project 5 66189166 66189491 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001730.1 MGP_BALBcJ_G0001645.1 mouse_genomes_project 5 100694023 100695368 + TEC TEC MGP_BALBcJ_T0014861.1 MGP_BALBcJ_G0012958.1 mouse_genomes_project 5 18658919 18659271 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001653.1 MGP_BALBcJ_G0001569.1 mouse_genomes_project 5 64474085 64476471 - TEC TEC MGP_BALBcJ_T0075722.1 MGP_BALBcJ_G0030320.1 mouse_genomes_project 5 143742397 143763578 + MGP_BALBcJ_P0075722 protein_coding protein_coding MGP_BALBcJ_T0075723.1 MGP_BALBcJ_G0030320.1 mouse_genomes_project 5 143742435 143745624 + MGP_BALBcJ_P0075723 protein_coding protein_coding MGP_BALBcJ_T0075724.1 MGP_BALBcJ_G0030320.1 mouse_genomes_project 5 143742450 143763572 + MGP_BALBcJ_P0075724 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075725.1 MGP_BALBcJ_G0030320.1 mouse_genomes_project 5 143742451 143744565 + protein_coding retained_intron MGP_BALBcJ_T0075726.1 MGP_BALBcJ_G0030320.1 mouse_genomes_project 5 143742729 143745619 + protein_coding processed_transcript MGP_BALBcJ_T0072788.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98656956 98683194 - MGP_BALBcJ_P0072788 Hnrnpd protein_coding protein_coding MGP_BALBcJ_T0072789.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98661603 98683193 - MGP_BALBcJ_P0072789 Hnrnpd protein_coding protein_coding MGP_BALBcJ_T0072790.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98662003 98683173 - MGP_BALBcJ_P0072790 Hnrnpd protein_coding protein_coding MGP_BALBcJ_T0072791.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98662007 98683191 - MGP_BALBcJ_P0072791 Hnrnpd protein_coding protein_coding MGP_BALBcJ_T0072792.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98662008 98677536 - MGP_BALBcJ_P0072792 Hnrnpd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072793.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98662156 98667180 - MGP_BALBcJ_P0072793 Hnrnpd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072794.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98662173 98665756 - MGP_BALBcJ_P0072794 Hnrnpd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072795.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98663288 98682880 - MGP_BALBcJ_P0072795 Hnrnpd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072796.1 MGP_BALBcJ_G0029756.1 mouse_genomes_project 5 98665748 98667393 - Hnrnpd protein_coding retained_intron MGP_BALBcJ_T0074070.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121611612 121617366 - Cux2 protein_coding retained_intron MGP_BALBcJ_T0074071.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121611899 121681422 - MGP_BALBcJ_P0074071 Cux2 protein_coding protein_coding MGP_BALBcJ_T0074072.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121624451 121625687 - Cux2 protein_coding retained_intron MGP_BALBcJ_T0074073.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121631162 121666369 - Cux2 protein_coding processed_transcript MGP_BALBcJ_T0074074.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121631168 121646930 - Cux2 protein_coding processed_transcript MGP_BALBcJ_T0074075.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121636010 121807110 - MGP_BALBcJ_P0074075 Cux2 protein_coding protein_coding MGP_BALBcJ_T0074076.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121638677 121758641 - MGP_BALBcJ_P0074076 Cux2 protein_coding protein_coding MGP_BALBcJ_T0074077.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121646957 121668016 - Cux2 protein_coding processed_transcript MGP_BALBcJ_T0074078.1 MGP_BALBcJ_G0030016.1 mouse_genomes_project 5 121676194 121804906 - Cux2 protein_coding processed_transcript MGP_BALBcJ_T0001575.1 MGP_BALBcJ_G0001492.1 mouse_genomes_project 5 46886157 46886545 - TEC TEC MGP_BALBcJ_T0010684.1 MGP_BALBcJ_G0008809.1 mouse_genomes_project 5 110124966 110125033 - Mir7026 miRNA miRNA MGP_BALBcJ_T0015010.1 MGP_BALBcJ_G0013107.1 mouse_genomes_project 5 74067844 74068194 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101204.1 MGP_BALBcJ_G0039240.1 mouse_genomes_project 5 66473769 66473896 - Gm23605 snoRNA snoRNA MGP_BALBcJ_T0071392.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34920507 34948576 + MGP_BALBcJ_P0071392 Crmp1 protein_coding protein_coding MGP_BALBcJ_T0071393.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34920652 34972316 + MGP_BALBcJ_P0071393 Crmp1 protein_coding protein_coding MGP_BALBcJ_T0071394.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34921306 34958037 + MGP_BALBcJ_P0071394 Crmp1 protein_coding protein_coding MGP_BALBcJ_T0071395.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34924342 34972284 + MGP_BALBcJ_P0071395 Crmp1 protein_coding protein_coding MGP_BALBcJ_T0071396.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34924423 34945313 + Crmp1 protein_coding retained_intron MGP_BALBcJ_T0071397.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34926287 34958776 + MGP_BALBcJ_P0071397 Crmp1 protein_coding protein_coding MGP_BALBcJ_T0071398.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34948531 34956627 + Crmp1 protein_coding retained_intron MGP_BALBcJ_T0071399.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34959651 34963074 + Crmp1 protein_coding retained_intron MGP_BALBcJ_T0071400.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34960311 34962582 + Crmp1 protein_coding retained_intron MGP_BALBcJ_T0071401.1 MGP_BALBcJ_G0029476.1 mouse_genomes_project 5 34963775 34966845 + Crmp1 protein_coding retained_intron MGP_BALBcJ_T0070803.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28684701 28698772 - MGP_BALBcJ_P0070803 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070804.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28684710 28698743 - MGP_BALBcJ_P0070804 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070805.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28685471 28698719 - MGP_BALBcJ_P0070805 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070806.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28685833 28698749 - MGP_BALBcJ_P0070806 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070807.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28685891 28698673 - MGP_BALBcJ_P0070807 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070808.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28685916 28698713 - MGP_BALBcJ_P0070808 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070809.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28685984 28690434 - MGP_BALBcJ_P0070809 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070810.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28686086 28690454 - Mpv17 protein_coding retained_intron MGP_BALBcJ_T0070811.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28688467 28698739 - Mpv17 protein_coding retained_intron MGP_BALBcJ_T0070812.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28688667 28698742 - MGP_BALBcJ_P0070812 Mpv17 protein_coding protein_coding MGP_BALBcJ_T0070814.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28689433 28698739 - Mpv17 protein_coding retained_intron MGP_BALBcJ_T0070815.1 MGP_BALBcJ_G0029389.1 mouse_genomes_project 5 28689669 28698263 - Mpv17 protein_coding retained_intron MGP_BALBcJ_T0075117.1 MGP_BALBcJ_G0030188.1 mouse_genomes_project 5 136885427 136898167 + MGP_BALBcJ_P0075117 Fis1 protein_coding protein_coding MGP_BALBcJ_T0075118.1 MGP_BALBcJ_G0030188.1 mouse_genomes_project 5 136885558 136898084 + MGP_BALBcJ_P0075118 Fis1 protein_coding protein_coding MGP_BALBcJ_T0075119.1 MGP_BALBcJ_G0030188.1 mouse_genomes_project 5 136894024 136898169 + MGP_BALBcJ_P0075119 Fis1 protein_coding protein_coding MGP_BALBcJ_T0075120.1 MGP_BALBcJ_G0030188.1 mouse_genomes_project 5 136894380 136897892 + Fis1 protein_coding processed_transcript MGP_BALBcJ_T0075121.1 MGP_BALBcJ_G0030188.1 mouse_genomes_project 5 136894391 136898045 + Fis1 protein_coding processed_transcript MGP_BALBcJ_T0075122.1 MGP_BALBcJ_G0030188.1 mouse_genomes_project 5 136894792 136897946 + Fis1 protein_coding processed_transcript MGP_BALBcJ_T0070627.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27628118 27642020 - MGP_BALBcJ_P0070627 protein_coding unknown_likely_coding MGP_BALBcJ_T0070628.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27628186 27642087 - protein_coding retained_intron MGP_BALBcJ_T0070629.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27628253 27642042 - MGP_BALBcJ_P0070629 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070630.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27629102 27642054 - MGP_BALBcJ_P0070630 protein_coding protein_coding MGP_BALBcJ_T0070631.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27631265 27642025 - MGP_BALBcJ_P0070631 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070632.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27631875 27642059 - protein_coding retained_intron MGP_BALBcJ_T0070633.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27632132 27642049 - MGP_BALBcJ_P0070633 protein_coding protein_coding MGP_BALBcJ_T0070634.1 MGP_BALBcJ_G0029358.1 mouse_genomes_project 5 27636380 27641995 - protein_coding processed_transcript MGP_BALBcJ_T0001863.1 MGP_BALBcJ_G0001777.1 mouse_genomes_project 5 132254629 132255904 - TEC TEC MGP_BALBcJ_T0099940.1 MGP_BALBcJ_G0037976.1 mouse_genomes_project 5 81831822 81831944 - Gm25806 snRNA snRNA MGP_BALBcJ_T0010699.1 MGP_BALBcJ_G0008824.1 mouse_genomes_project 5 125246270 125246347 + Gm27551 miRNA miRNA MGP_BALBcJ_T0072548.1 MGP_BALBcJ_G0029696.1 mouse_genomes_project 5 88721916 88723208 + MGP_BALBcJ_P0072548 Gm9958 protein_coding protein_coding MGP_BALBcJ_T0001500.1 MGP_BALBcJ_G0001418.1 mouse_genomes_project 5 30656145 30657394 + TEC TEC MGP_BALBcJ_T0004830.1 MGP_BALBcJ_G0004160.1 mouse_genomes_project 5 134552394 134556050 + Gm10369 antisense antisense MGP_BALBcJ_T0071728.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51504781 51540924 + MGP_BALBcJ_P0071728 Tbc1d19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071729.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51504802 51599800 + MGP_BALBcJ_P0071729 Tbc1d19 protein_coding protein_coding MGP_BALBcJ_T0071730.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51504823 51532025 + Tbc1d19 protein_coding processed_transcript MGP_BALBcJ_T0071731.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51504824 51526331 + Tbc1d19 protein_coding retained_intron MGP_BALBcJ_T0071732.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51504829 51599798 + MGP_BALBcJ_P0071732 Tbc1d19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071733.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51504854 51533564 + MGP_BALBcJ_P0071733 Tbc1d19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071734.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51528161 51533506 + Tbc1d19 protein_coding retained_intron MGP_BALBcJ_T0071735.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51532014 51544582 + Tbc1d19 protein_coding processed_transcript MGP_BALBcJ_T0071736.1 MGP_BALBcJ_G0029533.1 mouse_genomes_project 5 51586830 51599573 + Tbc1d19 protein_coding processed_transcript MGP_BALBcJ_T0004745.1 MGP_BALBcJ_G0004098.1 mouse_genomes_project 5 106595392 106599041 - A930041C12Rik antisense antisense MGP_BALBcJ_T0071274.1 MGP_BALBcJ_G0029454.1 mouse_genomes_project 5 32981202 32984648 + MGP_BALBcJ_P0071274 Adra2c protein_coding protein_coding MGP_BALBcJ_T0001534.1 MGP_BALBcJ_G0001452.1 mouse_genomes_project 5 42169737 42170485 - TEC TEC MGP_BALBcJ_T0074492.1 MGP_BALBcJ_G0030078.1 mouse_genomes_project 5 124391943 124411683 + MGP_BALBcJ_P0074492 Gtf2h3 protein_coding protein_coding MGP_BALBcJ_T0074493.1 MGP_BALBcJ_G0030078.1 mouse_genomes_project 5 124391945 124394491 + Gtf2h3 protein_coding retained_intron MGP_BALBcJ_T0074494.1 MGP_BALBcJ_G0030078.1 mouse_genomes_project 5 124391969 124406502 + Gtf2h3 protein_coding retained_intron MGP_BALBcJ_T0074495.1 MGP_BALBcJ_G0030078.1 mouse_genomes_project 5 124396672 124409456 + Gtf2h3 protein_coding retained_intron MGP_BALBcJ_T0074496.1 MGP_BALBcJ_G0030078.1 mouse_genomes_project 5 124404253 124410441 + Gtf2h3 protein_coding retained_intron MGP_BALBcJ_T0074497.1 MGP_BALBcJ_G0030078.1 mouse_genomes_project 5 124408147 124409465 + Gtf2h3 protein_coding retained_intron MGP_BALBcJ_T0001878.1 MGP_BALBcJ_G0001791.1 mouse_genomes_project 5 135361679 135363320 - TEC TEC MGP_BALBcJ_T0008171.1 MGP_BALBcJ_G0006656.1 mouse_genomes_project 5 83888730 83890708 + Gm43567 lincRNA lincRNA MGP_BALBcJ_T0001765.1 MGP_BALBcJ_G0001680.1 mouse_genomes_project 5 113350508 113353788 + TEC TEC MGP_BALBcJ_T0070817.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28700526 28725478 - Gtf3c2 protein_coding retained_intron MGP_BALBcJ_T0070818.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28700526 28725490 - MGP_BALBcJ_P0070818 Gtf3c2 protein_coding protein_coding MGP_BALBcJ_T0070819.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28701042 28725463 - MGP_BALBcJ_P0070819 Gtf3c2 protein_coding protein_coding MGP_BALBcJ_T0070820.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28701965 28703903 - Gtf3c2 protein_coding retained_intron MGP_BALBcJ_T0070821.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28704017 28710655 - Gtf3c2 protein_coding retained_intron MGP_BALBcJ_T0070822.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28711653 28725255 - Gtf3c2 protein_coding retained_intron MGP_BALBcJ_T0070823.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28718078 28725257 - Gtf3c2 protein_coding retained_intron MGP_BALBcJ_T0070824.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28718398 28719886 - MGP_BALBcJ_P0070824 Gtf3c2 protein_coding protein_coding MGP_BALBcJ_T0070825.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28718775 28725257 - MGP_BALBcJ_P0070825 Gtf3c2 protein_coding protein_coding MGP_BALBcJ_T0070826.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28719188 28725195 - MGP_BALBcJ_P0070826 Gtf3c2 protein_coding protein_coding MGP_BALBcJ_T0070827.1 MGP_BALBcJ_G0029391.1 mouse_genomes_project 5 28719305 28720206 - MGP_BALBcJ_P0070827 Gtf3c2 protein_coding protein_coding MGP_BALBcJ_T0075360.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138145984 138154407 + MGP_BALBcJ_P0075360 Ap4m1 protein_coding protein_coding MGP_BALBcJ_T0075361.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138145987 138149003 + MGP_BALBcJ_P0075361 Ap4m1 protein_coding protein_coding MGP_BALBcJ_T0075362.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138146029 138148362 + Ap4m1 protein_coding retained_intron MGP_BALBcJ_T0075363.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138146050 138152671 + MGP_BALBcJ_P0075363 Ap4m1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075364.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138146565 138148934 + Ap4m1 protein_coding retained_intron MGP_BALBcJ_T0075365.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138148775 138151190 + Ap4m1 protein_coding retained_intron MGP_BALBcJ_T0075366.1 MGP_BALBcJ_G0030240.1 mouse_genomes_project 5 138150558 138152677 + Ap4m1 protein_coding retained_intron MGP_BALBcJ_T0015084.1 MGP_BALBcJ_G0013181.1 mouse_genomes_project 5 106986637 106986864 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004673.1 MGP_BALBcJ_G0004044.1 mouse_genomes_project 5 43284269 43289332 + 9630001P10Rik antisense antisense MGP_BALBcJ_T0004674.1 MGP_BALBcJ_G0004044.1 mouse_genomes_project 5 43284843 43291033 + 9630001P10Rik antisense antisense MGP_BALBcJ_T0004675.1 MGP_BALBcJ_G0004044.1 mouse_genomes_project 5 43284937 43289655 + 9630001P10Rik antisense antisense MGP_BALBcJ_T0004776.1 MGP_BALBcJ_G0004122.1 mouse_genomes_project 5 116721464 116725396 + 9530046B11Rik antisense antisense MGP_BALBcJ_T0071321.1 MGP_BALBcJ_G0029462.1 mouse_genomes_project 5 33595480 33706724 + MGP_BALBcJ_P0071321 Afap1 protein_coding protein_coding MGP_BALBcJ_T0071322.1 MGP_BALBcJ_G0029462.1 mouse_genomes_project 5 33595626 33607427 + Afap1 protein_coding processed_transcript MGP_BALBcJ_T0071323.1 MGP_BALBcJ_G0029462.1 mouse_genomes_project 5 33614844 33698840 + MGP_BALBcJ_P0071323 Afap1 protein_coding protein_coding MGP_BALBcJ_T0071324.1 MGP_BALBcJ_G0029462.1 mouse_genomes_project 5 33635008 33706744 + MGP_BALBcJ_P0071324 Afap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0071325.1 MGP_BALBcJ_G0029462.1 mouse_genomes_project 5 33689932 33694193 + Afap1 protein_coding retained_intron MGP_BALBcJ_T0001486.1 MGP_BALBcJ_G0001406.1 mouse_genomes_project 5 28639071 28641390 + TEC TEC MGP_BALBcJ_T0001487.1 MGP_BALBcJ_G0001406.1 mouse_genomes_project 5 28639073 28641390 + TEC TEC MGP_BALBcJ_T0075009.1 MGP_BALBcJ_G0030171.1 mouse_genomes_project 5 135820184 135850053 - MGP_BALBcJ_P0075009 Ywhag protein_coding protein_coding MGP_BALBcJ_T0075010.1 MGP_BALBcJ_G0030171.1 mouse_genomes_project 5 135820184 135850008 - MGP_BALBcJ_P0075010 Ywhag protein_coding protein_coding MGP_BALBcJ_T0075011.1 MGP_BALBcJ_G0030171.1 mouse_genomes_project 5 135846248 135850051 - Ywhag protein_coding retained_intron MGP_BALBcJ_T0075012.1 MGP_BALBcJ_G0030171.1 mouse_genomes_project 5 135846253 135850070 - Ywhag protein_coding processed_transcript MGP_BALBcJ_T0075013.1 MGP_BALBcJ_G0030171.1 mouse_genomes_project 5 135846329 135850004 - Ywhag protein_coding processed_transcript MGP_BALBcJ_T0070089.1 MGP_BALBcJ_G0029257.1 mouse_genomes_project 5 2757091 2768319 - MGP_BALBcJ_P0070089 Steap1 protein_coding protein_coding MGP_BALBcJ_T0070090.1 MGP_BALBcJ_G0029257.1 mouse_genomes_project 5 2757099 2761176 - MGP_BALBcJ_P0070090 Steap1 protein_coding protein_coding MGP_BALBcJ_T0010646.1 MGP_BALBcJ_G0008771.1 mouse_genomes_project 5 6405276 6405352 + Mir879 miRNA miRNA MGP_BALBcJ_T0015004.1 MGP_BALBcJ_G0013101.1 mouse_genomes_project 5 72848678 72849579 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014888.1 MGP_BALBcJ_G0012985.1 mouse_genomes_project 5 22938497 22939101 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001437.1 MGP_BALBcJ_G0001358.1 mouse_genomes_project 5 5676561 5680176 + TEC TEC MGP_BALBcJ_T0001795.1 MGP_BALBcJ_G0001710.1 mouse_genomes_project 5 120900576 120903844 - TEC TEC MGP_BALBcJ_T0072862.1 MGP_BALBcJ_G0029768.1 mouse_genomes_project 5 99521437 99527154 + MGP_BALBcJ_P0072862 Mrps18c protein_coding protein_coding MGP_BALBcJ_T0072863.1 MGP_BALBcJ_G0029768.1 mouse_genomes_project 5 99521485 99522432 + Mrps18c protein_coding retained_intron MGP_BALBcJ_T0072864.1 MGP_BALBcJ_G0029768.1 mouse_genomes_project 5 99521485 99527214 + MGP_BALBcJ_P0072864 Mrps18c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072865.1 MGP_BALBcJ_G0029768.1 mouse_genomes_project 5 99521489 99527217 + MGP_BALBcJ_P0072865 Mrps18c protein_coding protein_coding MGP_BALBcJ_T0072866.1 MGP_BALBcJ_G0029768.1 mouse_genomes_project 5 99526632 99527215 + Mrps18c protein_coding retained_intron MGP_BALBcJ_T0074629.1 MGP_BALBcJ_G0030104.1 mouse_genomes_project 5 129492845 129508358 - MGP_BALBcJ_P0074629 Zfp11 protein_coding protein_coding MGP_BALBcJ_T0070572.1 MGP_BALBcJ_G0029347.1 mouse_genomes_project 5 25776716 25821056 - MGP_BALBcJ_P0070572 protein_coding protein_coding MGP_BALBcJ_T0070573.1 MGP_BALBcJ_G0029347.1 mouse_genomes_project 5 25778346 25785979 - MGP_BALBcJ_P0070573 protein_coding protein_coding MGP_BALBcJ_T0070574.1 MGP_BALBcJ_G0029347.1 mouse_genomes_project 5 25781357 25813139 - MGP_BALBcJ_P0070574 protein_coding protein_coding MGP_BALBcJ_T0070575.1 MGP_BALBcJ_G0029347.1 mouse_genomes_project 5 25781665 25786125 - MGP_BALBcJ_P0070575 protein_coding protein_coding MGP_BALBcJ_T0070576.1 MGP_BALBcJ_G0029347.1 mouse_genomes_project 5 25785201 25786320 - MGP_BALBcJ_P0070576 protein_coding protein_coding MGP_BALBcJ_T0001899.1 MGP_BALBcJ_G0001812.1 mouse_genomes_project 5 148616713 148617398 + TEC TEC MGP_BALBcJ_T0072419.1 MGP_BALBcJ_G0029659.1 mouse_genomes_project 5 85677853 85710953 - MGP_BALBcJ_P0072419 protein_coding protein_coding MGP_BALBcJ_T0015081.1 MGP_BALBcJ_G0013178.1 mouse_genomes_project 5 106351815 106352458 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004656.1 MGP_BALBcJ_G0004033.1 mouse_genomes_project 5 34719551 34723028 - Gm26647 antisense antisense MGP_BALBcJ_T0010674.1 MGP_BALBcJ_G0008799.1 mouse_genomes_project 5 81598115 81598198 + Gm44303 miRNA miRNA MGP_BALBcJ_T0004875.1 MGP_BALBcJ_G0004192.1 mouse_genomes_project 5 150778290 150793845 - Gm42556 antisense antisense MGP_BALBcJ_T0001834.1 MGP_BALBcJ_G0001748.1 mouse_genomes_project 5 129338871 129339809 - TEC TEC MGP_BALBcJ_T0001619.1 MGP_BALBcJ_G0001536.1 mouse_genomes_project 5 60516528 60519837 - TEC TEC MGP_BALBcJ_T0072523.1 MGP_BALBcJ_G0029692.1 mouse_genomes_project 5 87894263 87944813 + MGP_BALBcJ_P0072523 Npffr2 protein_coding protein_coding MGP_BALBcJ_T0075908.1 MGP_BALBcJ_G0030361.1 mouse_genomes_project 5 147206203 147210368 + MGP_BALBcJ_P0075908 Rpl21 protein_coding protein_coding MGP_BALBcJ_T0075909.1 MGP_BALBcJ_G0030361.1 mouse_genomes_project 5 147206459 147207919 + Rpl21 protein_coding retained_intron MGP_BALBcJ_T0075910.1 MGP_BALBcJ_G0030361.1 mouse_genomes_project 5 147206508 147209307 + MGP_BALBcJ_P0075910 Rpl21 protein_coding protein_coding MGP_BALBcJ_T0075911.1 MGP_BALBcJ_G0030361.1 mouse_genomes_project 5 147206515 147209308 + MGP_BALBcJ_P0075911 Rpl21 protein_coding protein_coding MGP_BALBcJ_T0075912.1 MGP_BALBcJ_G0030361.1 mouse_genomes_project 5 147207505 147208278 + Rpl21 protein_coding retained_intron MGP_BALBcJ_T0075913.1 MGP_BALBcJ_G0030361.1 mouse_genomes_project 5 147208519 147209308 + Rpl21 protein_coding retained_intron MGP_BALBcJ_T0098616.1 MGP_BALBcJ_G0036670.1 mouse_genomes_project 5 106371744 106371863 + n-R5s173 rRNA rRNA MGP_BALBcJ_T0001459.1 MGP_BALBcJ_G0001380.1 mouse_genomes_project 5 12147563 12149222 + TEC TEC MGP_BALBcJ_T0015094.1 MGP_BALBcJ_G0013191.1 mouse_genomes_project 5 108672153 108672737 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001614.1 MGP_BALBcJ_G0001531.1 mouse_genomes_project 5 55915846 55919338 + TEC TEC MGP_BALBcJ_T0015037.1 MGP_BALBcJ_G0013134.1 mouse_genomes_project 5 86527233 86527588 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015108.1 MGP_BALBcJ_G0013205.1 mouse_genomes_project 5 113737963 113738709 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011594.1 MGP_BALBcJ_G0009719.1 mouse_genomes_project 5 139414849 139415126 + Gm27316 misc_RNA misc_RNA MGP_BALBcJ_T0075195.1 MGP_BALBcJ_G0030204.1 mouse_genomes_project 5 137304538 137407123 - MGP_BALBcJ_P0075195 Zan protein_coding protein_coding MGP_BALBcJ_T0075196.1 MGP_BALBcJ_G0030204.1 mouse_genomes_project 5 137304538 137406654 - MGP_BALBcJ_P0075196 Zan protein_coding protein_coding MGP_BALBcJ_T0075197.1 MGP_BALBcJ_G0030204.1 mouse_genomes_project 5 137324622 137327831 - Zan protein_coding retained_intron MGP_BALBcJ_T0075198.1 MGP_BALBcJ_G0030204.1 mouse_genomes_project 5 137335533 137337758 - MGP_BALBcJ_P0075198 Zan protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075199.1 MGP_BALBcJ_G0030204.1 mouse_genomes_project 5 137362152 137376658 - Zan protein_coding retained_intron MGP_BALBcJ_T0008330.1 MGP_BALBcJ_G0006768.1 mouse_genomes_project 5 122814447 123016820 - lincRNA lincRNA MGP_BALBcJ_T0008189.1 MGP_BALBcJ_G0006674.1 mouse_genomes_project 5 95801762 95809033 + Gm43146 lincRNA lincRNA MGP_BALBcJ_T0015097.1 MGP_BALBcJ_G0013194.1 mouse_genomes_project 5 109028131 109028494 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004731.1 MGP_BALBcJ_G0004088.1 mouse_genomes_project 5 98678671 98683114 + antisense antisense MGP_BALBcJ_T0070625.1 MGP_BALBcJ_G0029357.1 mouse_genomes_project 5 27573621 27581838 + MGP_BALBcJ_P0070625 Il6 protein_coding protein_coding MGP_BALBcJ_T0070626.1 MGP_BALBcJ_G0029357.1 mouse_genomes_project 5 27573669 27581405 + MGP_BALBcJ_P0070626 Il6 protein_coding protein_coding MGP_BALBcJ_T0001469.1 MGP_BALBcJ_G0001390.1 mouse_genomes_project 5 20263821 20268534 - TEC TEC MGP_BALBcJ_T0070474.1 MGP_BALBcJ_G0029323.1 mouse_genomes_project 5 21938067 21989706 + MGP_BALBcJ_P0070474 Agap3 protein_coding protein_coding MGP_BALBcJ_T0070475.1 MGP_BALBcJ_G0029323.1 mouse_genomes_project 5 21938097 21970373 + MGP_BALBcJ_P0070475 Agap3 protein_coding unknown_likely_coding MGP_BALBcJ_T0070476.1 MGP_BALBcJ_G0029323.1 mouse_genomes_project 5 21938224 21969509 + Agap3 protein_coding processed_transcript MGP_BALBcJ_T0070477.1 MGP_BALBcJ_G0029323.1 mouse_genomes_project 5 21960875 21970365 + MGP_BALBcJ_P0070477 Agap3 protein_coding protein_coding MGP_BALBcJ_T0070478.1 MGP_BALBcJ_G0029323.1 mouse_genomes_project 5 21966452 21989696 + MGP_BALBcJ_P0070478 Agap3 protein_coding protein_coding MGP_BALBcJ_T0070479.1 MGP_BALBcJ_G0029323.1 mouse_genomes_project 5 21966871 21970363 + Agap3 protein_coding processed_transcript MGP_BALBcJ_T0001465.1 MGP_BALBcJ_G0001386.1 mouse_genomes_project 5 18101482 18101981 + TEC TEC MGP_BALBcJ_T0001644.1 MGP_BALBcJ_G0001560.1 mouse_genomes_project 5 63894565 63896143 + TEC TEC MGP_BALBcJ_T0073721.1 MGP_BALBcJ_G0029948.1 mouse_genomes_project 5 115130980 115141309 + MGP_BALBcJ_P0073721 Rplp0 protein_coding protein_coding MGP_BALBcJ_T0073722.1 MGP_BALBcJ_G0029948.1 mouse_genomes_project 5 115130981 115141099 + MGP_BALBcJ_P0073722 Rplp0 protein_coding unknown_likely_coding MGP_BALBcJ_T0073723.1 MGP_BALBcJ_G0029948.1 mouse_genomes_project 5 115131050 115140151 + MGP_BALBcJ_P0073723 Rplp0 protein_coding protein_coding MGP_BALBcJ_T0073724.1 MGP_BALBcJ_G0029948.1 mouse_genomes_project 5 115131091 115132728 + MGP_BALBcJ_P0073724 Rplp0 protein_coding protein_coding MGP_BALBcJ_T0073725.1 MGP_BALBcJ_G0029948.1 mouse_genomes_project 5 115131136 115132585 + Rplp0 protein_coding retained_intron MGP_BALBcJ_T0102589.1 MGP_BALBcJ_G0040405.1 mouse_genomes_project 5 148871963 148872598 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099904.1 MGP_BALBcJ_G0037940.1 mouse_genomes_project 5 17480469 17480573 + Gm23570 snRNA snRNA MGP_BALBcJ_T0014908.1 MGP_BALBcJ_G0013005.1 mouse_genomes_project 5 29918519 29918708 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015023.1 MGP_BALBcJ_G0013120.1 mouse_genomes_project 5 81424222 81425090 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008295.1 MGP_BALBcJ_G0006740.1 mouse_genomes_project 5 114922720 114924143 - 4930401G09Rik lincRNA lincRNA MGP_BALBcJ_T0098615.1 MGP_BALBcJ_G0036669.1 mouse_genomes_project 5 90464257 90464364 - Gm24931 rRNA rRNA MGP_BALBcJ_T0073025.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105810406 105866971 - MGP_BALBcJ_P0073025 Hfm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073026.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105810408 105898232 - MGP_BALBcJ_P0073026 Hfm1 protein_coding protein_coding MGP_BALBcJ_T0073027.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105810411 105897793 - MGP_BALBcJ_P0073027 Hfm1 protein_coding protein_coding MGP_BALBcJ_T0073028.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105810873 105894836 - MGP_BALBcJ_P0073028 Hfm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0073029.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105811776 105861208 - MGP_BALBcJ_P0073029 Hfm1 protein_coding protein_coding MGP_BALBcJ_T0073030.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105874526 105898170 - Hfm1 protein_coding retained_intron MGP_BALBcJ_T0073031.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105874526 105897793 - MGP_BALBcJ_P0073031 Hfm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073032.1 MGP_BALBcJ_G0029808.1 mouse_genomes_project 5 105874710 105897755 - MGP_BALBcJ_P0073032 Hfm1 protein_coding protein_coding MGP_BALBcJ_T0014851.1 MGP_BALBcJ_G0012948.1 mouse_genomes_project 5 15711525 15711985 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015088.1 MGP_BALBcJ_G0013185.1 mouse_genomes_project 5 107202681 107203157 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001645.1 MGP_BALBcJ_G0001561.1 mouse_genomes_project 5 64002102 64005496 - TEC TEC MGP_BALBcJ_T0073136.1 MGP_BALBcJ_G0029829.1 mouse_genomes_project 5 107315240 107351770 + MGP_BALBcJ_P0073136 Pigg protein_coding protein_coding MGP_BALBcJ_T0073137.1 MGP_BALBcJ_G0029829.1 mouse_genomes_project 5 107315240 107352892 + MGP_BALBcJ_P0073137 Pigg protein_coding protein_coding MGP_BALBcJ_T0073138.1 MGP_BALBcJ_G0029829.1 mouse_genomes_project 5 107315267 107351775 + MGP_BALBcJ_P0073138 Pigg protein_coding protein_coding MGP_BALBcJ_T0018084.1 MGP_BALBcJ_G0015529.1 mouse_genomes_project 5 22594388 22596413 + 2900005J15Rik processed_transcript processed_transcript MGP_BALBcJ_T0018085.1 MGP_BALBcJ_G0015529.1 mouse_genomes_project 5 22594863 22603512 + 2900005J15Rik processed_transcript processed_transcript MGP_BALBcJ_T0075894.1 MGP_BALBcJ_G0030357.1 mouse_genomes_project 5 146589556 146655157 + MGP_BALBcJ_P0075894 protein_coding protein_coding MGP_BALBcJ_T0075895.1 MGP_BALBcJ_G0030357.1 mouse_genomes_project 5 146589653 146633602 + MGP_BALBcJ_P0075895 protein_coding protein_coding MGP_BALBcJ_T0075896.1 MGP_BALBcJ_G0030357.1 mouse_genomes_project 5 146589961 146664183 + MGP_BALBcJ_P0075896 protein_coding unknown_likely_coding MGP_BALBcJ_T0075897.1 MGP_BALBcJ_G0030357.1 mouse_genomes_project 5 146616614 146618804 + protein_coding retained_intron MGP_BALBcJ_T0075898.1 MGP_BALBcJ_G0030357.1 mouse_genomes_project 5 146650709 146654581 + protein_coding processed_transcript MGP_BALBcJ_T0075899.1 MGP_BALBcJ_G0030357.1 mouse_genomes_project 5 146658777 146661925 + protein_coding retained_intron MGP_BALBcJ_T0004760.1 MGP_BALBcJ_G0004110.1 mouse_genomes_project 5 113125416 113126136 + Gm15736 antisense antisense MGP_BALBcJ_T0014999.1 MGP_BALBcJ_G0013096.1 mouse_genomes_project 5 70316355 70316869 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001738.1 MGP_BALBcJ_G0001653.1 mouse_genomes_project 5 103814687 103815055 - TEC TEC MGP_BALBcJ_T0015032.1 MGP_BALBcJ_G0013129.1 mouse_genomes_project 5 85840303 85840712 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008213.1 MGP_BALBcJ_G0006690.1 mouse_genomes_project 5 100431138 100437045 - Gm43271 lincRNA lincRNA MGP_BALBcJ_T0101727.1 MGP_BALBcJ_G0039700.1 mouse_genomes_project 5 86111026 86114802 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101728.1 MGP_BALBcJ_G0039700.1 mouse_genomes_project 5 86111185 86112310 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0075500.1 MGP_BALBcJ_G0030269.1 mouse_genomes_project 5 139482025 139484382 + Gpr146 protein_coding processed_transcript MGP_BALBcJ_T0075501.1 MGP_BALBcJ_G0030269.1 mouse_genomes_project 5 139482070 139484383 + Gpr146 protein_coding processed_transcript MGP_BALBcJ_T0075502.1 MGP_BALBcJ_G0030269.1 mouse_genomes_project 5 139482491 139496844 + MGP_BALBcJ_P0075502 Gpr146 protein_coding protein_coding MGP_BALBcJ_T0075503.1 MGP_BALBcJ_G0030269.1 mouse_genomes_project 5 139482548 139483588 + MGP_BALBcJ_P0075503 Gpr146 protein_coding protein_coding MGP_BALBcJ_T0075504.1 MGP_BALBcJ_G0030269.1 mouse_genomes_project 5 139484909 139500496 + MGP_BALBcJ_P0075504 Gpr146 protein_coding protein_coding MGP_BALBcJ_T0075505.1 MGP_BALBcJ_G0030269.1 mouse_genomes_project 5 139494115 139500495 + MGP_BALBcJ_P0075505 Gpr146 protein_coding protein_coding MGP_BALBcJ_T0075553.1 MGP_BALBcJ_G0030283.1 mouse_genomes_project 5 140448534 140452759 - MGP_BALBcJ_P0075553 Mrm2 protein_coding protein_coding MGP_BALBcJ_T0010647.1 MGP_BALBcJ_G0008772.1 mouse_genomes_project 5 11243470 11243575 - Gm24054 miRNA miRNA MGP_BALBcJ_T0071587.1 MGP_BALBcJ_G0029511.1 mouse_genomes_project 5 43173094 43178679 + MGP_BALBcJ_P0071587 Med28 protein_coding protein_coding MGP_BALBcJ_T0071588.1 MGP_BALBcJ_G0029511.1 mouse_genomes_project 5 43173125 43178431 + MGP_BALBcJ_P0071588 Med28 protein_coding protein_coding MGP_BALBcJ_T0071589.1 MGP_BALBcJ_G0029511.1 mouse_genomes_project 5 43173806 43178686 + Med28 protein_coding processed_transcript MGP_BALBcJ_T0071590.1 MGP_BALBcJ_G0029511.1 mouse_genomes_project 5 43174958 43178259 + Med28 protein_coding retained_intron MGP_BALBcJ_T0011583.1 MGP_BALBcJ_G0009708.1 mouse_genomes_project 5 108803323 108803408 + Gm28000 misc_RNA misc_RNA MGP_BALBcJ_T0015174.1 MGP_BALBcJ_G0013271.1 mouse_genomes_project 5 145639836 145640029 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014860.1 MGP_BALBcJ_G0012957.1 mouse_genomes_project 5 18596474 18596726 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014892.1 MGP_BALBcJ_G0012989.1 mouse_genomes_project 5 24114663 24114775 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004841.1 MGP_BALBcJ_G0004169.1 mouse_genomes_project 5 137463051 137471333 + Gm17112 antisense antisense MGP_BALBcJ_T0008317.1 MGP_BALBcJ_G0006758.1 mouse_genomes_project 5 119155165 119164521 - Gm31314 lincRNA lincRNA MGP_BALBcJ_T0001498.1 MGP_BALBcJ_G0001416.1 mouse_genomes_project 5 30324642 30325531 - TEC TEC MGP_BALBcJ_T0001807.1 MGP_BALBcJ_G0001722.1 mouse_genomes_project 5 122324824 122325386 - TEC TEC MGP_BALBcJ_T0010679.1 MGP_BALBcJ_G0008804.1 mouse_genomes_project 5 97151477 97151586 - Mir703 miRNA miRNA MGP_BALBcJ_T0008010.1 MGP_BALBcJ_G0006538.1 mouse_genomes_project 5 1765568 1781769 - Gm42744 lincRNA lincRNA MGP_BALBcJ_T0004677.1 MGP_BALBcJ_G0004046.1 mouse_genomes_project 5 46260742 46269831 + Gm20700 antisense antisense MGP_BALBcJ_T0075837.1 MGP_BALBcJ_G0030343.1 mouse_genomes_project 5 145340473 145352923 - MGP_BALBcJ_P0075837 Pdap1 protein_coding protein_coding MGP_BALBcJ_T0075838.1 MGP_BALBcJ_G0030343.1 mouse_genomes_project 5 145341789 145349381 - Pdap1 protein_coding processed_transcript MGP_BALBcJ_T0075839.1 MGP_BALBcJ_G0030343.1 mouse_genomes_project 5 145343076 145347178 - Pdap1 protein_coding retained_intron MGP_BALBcJ_T0075840.1 MGP_BALBcJ_G0030343.1 mouse_genomes_project 5 145344880 145347332 - Pdap1 protein_coding retained_intron MGP_BALBcJ_T0075841.1 MGP_BALBcJ_G0030343.1 mouse_genomes_project 5 145349262 145352683 - Pdap1 protein_coding retained_intron MGP_BALBcJ_T0008092.1 MGP_BALBcJ_G0006592.1 mouse_genomes_project 5 37620468 37630792 - Gm35191 lincRNA lincRNA MGP_BALBcJ_T0072396.1 MGP_BALBcJ_G0029649.1 mouse_genomes_project 5 84841518 84860097 - MGP_BALBcJ_P0072396 Tmprss11b protein_coding protein_coding MGP_BALBcJ_T0069947.1 MGP_BALBcJ_G0029237.1 mouse_genomes_project 5 191686 193059 + MGP_BALBcJ_P0069947 protein_coding protein_coding MGP_BALBcJ_T0069949.1 MGP_BALBcJ_G0029237.1 mouse_genomes_project 5 192707 192940 + protein_coding transcribed_unprocessed_pseudogene MGP_BALBcJ_T0010707.1 MGP_BALBcJ_G0008832.1 mouse_genomes_project 5 136298783 136298871 - Mir721 miRNA miRNA MGP_BALBcJ_T0069991.1 MGP_BALBcJ_G0029244.1 mouse_genomes_project 5 616442 727074 - MGP_BALBcJ_P0069991 Ankib1 protein_coding protein_coding MGP_BALBcJ_T0069992.1 MGP_BALBcJ_G0029244.1 mouse_genomes_project 5 619911 628738 - Ankib1 protein_coding retained_intron MGP_BALBcJ_T0069993.1 MGP_BALBcJ_G0029244.1 mouse_genomes_project 5 620322 719623 - MGP_BALBcJ_P0069993 Ankib1 protein_coding protein_coding MGP_BALBcJ_T0069994.1 MGP_BALBcJ_G0029244.1 mouse_genomes_project 5 621243 621672 - Ankib1 protein_coding retained_intron MGP_BALBcJ_T0069995.1 MGP_BALBcJ_G0029244.1 mouse_genomes_project 5 626993 628475 - Ankib1 protein_coding retained_intron MGP_BALBcJ_T0069996.1 MGP_BALBcJ_G0029244.1 mouse_genomes_project 5 661394 726936 - Ankib1 protein_coding retained_intron MGP_BALBcJ_T0075532.1 MGP_BALBcJ_G0030276.1 mouse_genomes_project 5 139901982 139914250 + MGP_BALBcJ_P0075532 Mafk protein_coding protein_coding MGP_BALBcJ_T0075533.1 MGP_BALBcJ_G0030276.1 mouse_genomes_project 5 139902003 139911097 + Mafk protein_coding processed_transcript MGP_BALBcJ_T0075534.1 MGP_BALBcJ_G0030276.1 mouse_genomes_project 5 139907975 139913928 + MGP_BALBcJ_P0075534 Mafk protein_coding protein_coding MGP_BALBcJ_T0008017.1 MGP_BALBcJ_G0006545.1 mouse_genomes_project 5 7289146 7395571 + Gm42831 lincRNA lincRNA MGP_BALBcJ_T0008018.1 MGP_BALBcJ_G0006545.1 mouse_genomes_project 5 7289196 7386435 + Gm42831 lincRNA lincRNA MGP_BALBcJ_T0070713.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28411470 28422639 + MGP_BALBcJ_P0070713 Tmem214 protein_coding protein_coding MGP_BALBcJ_T0070714.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28413089 28420503 + MGP_BALBcJ_P0070714 Tmem214 protein_coding protein_coding MGP_BALBcJ_T0070715.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28413091 28421823 + Tmem214 protein_coding retained_intron MGP_BALBcJ_T0070716.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28413093 28420927 + Tmem214 protein_coding retained_intron MGP_BALBcJ_T0070717.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28413822 28414944 + Tmem214 protein_coding retained_intron MGP_BALBcJ_T0070718.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28415231 28417053 + Tmem214 protein_coding processed_transcript MGP_BALBcJ_T0070719.1 MGP_BALBcJ_G0029374.1 mouse_genomes_project 5 28415276 28420922 + Tmem214 protein_coding retained_intron MGP_BALBcJ_T0070528.1 MGP_BALBcJ_G0029335.1 mouse_genomes_project 5 22673581 22714033 + MGP_BALBcJ_P0070528 Galntl5 protein_coding protein_coding MGP_BALBcJ_T0070529.1 MGP_BALBcJ_G0029335.1 mouse_genomes_project 5 22673623 22714031 + MGP_BALBcJ_P0070529 Galntl5 protein_coding protein_coding MGP_BALBcJ_T0001618.1 MGP_BALBcJ_G0001535.1 mouse_genomes_project 5 60472370 60473414 - TEC TEC MGP_BALBcJ_T0074770.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134052902 134064178 - MGP_BALBcJ_P0074770 Ncf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074771.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134053109 134064178 - MGP_BALBcJ_P0074771 Ncf1 protein_coding protein_coding MGP_BALBcJ_T0074772.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134053109 134064178 - MGP_BALBcJ_P0074772 Ncf1 protein_coding protein_coding MGP_BALBcJ_T0074773.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134053109 134064178 - MGP_BALBcJ_P0074773 Ncf1 protein_coding protein_coding MGP_BALBcJ_T0074774.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134054221 134055072 - Ncf1 protein_coding retained_intron MGP_BALBcJ_T0074775.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134056294 134062656 - Ncf1 protein_coding retained_intron MGP_BALBcJ_T0074776.1 MGP_BALBcJ_G0030132.1 mouse_genomes_project 5 134059981 134062075 - Ncf1 protein_coding retained_intron MGP_BALBcJ_T0071507.1 MGP_BALBcJ_G0029498.1 mouse_genomes_project 5 40881161 40937812 + MGP_BALBcJ_P0071507 Cpeb2 protein_coding protein_coding MGP_BALBcJ_T0071508.1 MGP_BALBcJ_G0029498.1 mouse_genomes_project 5 40881454 40937817 + MGP_BALBcJ_P0071508 Cpeb2 protein_coding protein_coding MGP_BALBcJ_T0071509.1 MGP_BALBcJ_G0029498.1 mouse_genomes_project 5 40881918 40885911 + Cpeb2 protein_coding retained_intron MGP_BALBcJ_T0071510.1 MGP_BALBcJ_G0029498.1 mouse_genomes_project 5 40883029 40929298 + MGP_BALBcJ_P0071510 Cpeb2 protein_coding protein_coding MGP_BALBcJ_T0071511.1 MGP_BALBcJ_G0029498.1 mouse_genomes_project 5 40883041 40883877 + Cpeb2 protein_coding processed_transcript MGP_BALBcJ_T0071512.1 MGP_BALBcJ_G0029498.1 mouse_genomes_project 5 40885306 40894451 + Cpeb2 protein_coding processed_transcript MGP_BALBcJ_T0014875.1 MGP_BALBcJ_G0012972.1 mouse_genomes_project 5 20340330 20340917 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001508.1 MGP_BALBcJ_G0001426.1 mouse_genomes_project 5 33251681 33254386 - TEC TEC MGP_BALBcJ_T0010702.1 MGP_BALBcJ_G0008827.1 mouse_genomes_project 5 134423028 134423067 + Mir7228 miRNA miRNA MGP_BALBcJ_T0098612.1 MGP_BALBcJ_G0036666.1 mouse_genomes_project 5 63041125 63041244 + Gm25154 rRNA rRNA MGP_BALBcJ_T0008416.1 MGP_BALBcJ_G0006823.1 mouse_genomes_project 5 146546058 146552529 - B230303O12Rik lincRNA lincRNA MGP_BALBcJ_T0071333.1 MGP_BALBcJ_G0029466.1 mouse_genomes_project 5 34174897 34187339 - MGP_BALBcJ_P0071333 Tada2b protein_coding protein_coding MGP_BALBcJ_T0071334.1 MGP_BALBcJ_G0029466.1 mouse_genomes_project 5 34177990 34186675 - MGP_BALBcJ_P0071334 Tada2b protein_coding protein_coding MGP_BALBcJ_T0014972.1 MGP_BALBcJ_G0013069.1 mouse_genomes_project 5 58486160 58487953 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099948.1 MGP_BALBcJ_G0037984.1 mouse_genomes_project 5 91358067 91358175 - Gm25521 snRNA snRNA MGP_BALBcJ_T0001481.1 MGP_BALBcJ_G0001401.1 mouse_genomes_project 5 26131920 26133606 + TEC TEC MGP_BALBcJ_T0073062.1 MGP_BALBcJ_G0029816.1 mouse_genomes_project 5 106479737 106522090 + MGP_BALBcJ_P0073062 protein_coding protein_coding MGP_BALBcJ_T0073416.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112559627 112564893 - MGP_BALBcJ_P0073416 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073417.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112559627 112564450 - MGP_BALBcJ_P0073417 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073418.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112559627 112565367 - MGP_BALBcJ_P0073418 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073419.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112559631 112564893 - MGP_BALBcJ_P0073419 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073420.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112559635 112565366 - MGP_BALBcJ_P0073420 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073421.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112560812 112564174 - Crybb3 protein_coding retained_intron MGP_BALBcJ_T0073422.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112561077 112564449 - Crybb3 protein_coding retained_intron MGP_BALBcJ_T0073423.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112562173 112564436 - MGP_BALBcJ_P0073423 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073424.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112562256 112565362 - MGP_BALBcJ_P0073424 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0073425.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112562322 112565363 - Crybb3 protein_coding processed_transcript MGP_BALBcJ_T0073426.1 MGP_BALBcJ_G0029890.1 mouse_genomes_project 5 112563539 112564842 - MGP_BALBcJ_P0073426 Crybb3 protein_coding protein_coding MGP_BALBcJ_T0001787.1 MGP_BALBcJ_G0001702.1 mouse_genomes_project 5 118312698 118314324 + TEC TEC MGP_BALBcJ_T0015000.1 MGP_BALBcJ_G0013097.1 mouse_genomes_project 5 70509590 70509849 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070866.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28786558 28797317 + MGP_BALBcJ_P0070866 Nrbp1 protein_coding protein_coding MGP_BALBcJ_T0070867.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28786558 28797311 + MGP_BALBcJ_P0070867 Nrbp1 protein_coding protein_coding MGP_BALBcJ_T0070868.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28786571 28790700 + MGP_BALBcJ_P0070868 Nrbp1 protein_coding protein_coding MGP_BALBcJ_T0070869.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28786589 28791586 + Nrbp1 protein_coding retained_intron MGP_BALBcJ_T0070870.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28786597 28790621 + MGP_BALBcJ_P0070870 Nrbp1 protein_coding protein_coding MGP_BALBcJ_T0070871.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28786626 28793665 + MGP_BALBcJ_P0070871 Nrbp1 protein_coding protein_coding MGP_BALBcJ_T0070872.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28789166 28790175 + Nrbp1 protein_coding retained_intron MGP_BALBcJ_T0070873.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28793173 28795732 + Nrbp1 protein_coding retained_intron MGP_BALBcJ_T0070874.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28795105 28797314 + Nrbp1 protein_coding retained_intron MGP_BALBcJ_T0070875.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28795341 28796484 + Nrbp1 protein_coding retained_intron MGP_BALBcJ_T0070876.1 MGP_BALBcJ_G0029397.1 mouse_genomes_project 5 28796095 28797200 + Nrbp1 protein_coding retained_intron MGP_BALBcJ_T0015054.1 MGP_BALBcJ_G0013151.1 mouse_genomes_project 5 96719036 96719346 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072643.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90683270 90746114 + MGP_BALBcJ_P0072643 Art3 protein_coding protein_coding MGP_BALBcJ_T0072644.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90683273 90746311 + MGP_BALBcJ_P0072644 Art3 protein_coding protein_coding MGP_BALBcJ_T0072645.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90683284 90698349 + Art3 protein_coding processed_transcript MGP_BALBcJ_T0072646.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90683284 90767632 + MGP_BALBcJ_P0072646 Art3 protein_coding protein_coding MGP_BALBcJ_T0072647.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90683284 90767629 + MGP_BALBcJ_P0072647 Art3 protein_coding protein_coding MGP_BALBcJ_T0072652.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90729912 90746226 + MGP_BALBcJ_P0072652 Art3 protein_coding protein_coding MGP_BALBcJ_T0072653.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90740064 90746197 + MGP_BALBcJ_P0072653 Art3 protein_coding protein_coding MGP_BALBcJ_T0072654.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90740940 90745905 + MGP_BALBcJ_P0072654 Art3 protein_coding protein_coding MGP_BALBcJ_T0072655.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741023 90745775 + MGP_BALBcJ_P0072655 Art3 protein_coding protein_coding MGP_BALBcJ_T0072656.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741028 90746156 + MGP_BALBcJ_P0072656 Art3 protein_coding protein_coding MGP_BALBcJ_T0072657.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741320 90767626 + Art3 protein_coding processed_transcript MGP_BALBcJ_T0072658.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741320 90767626 + MGP_BALBcJ_P0072658 Art3 protein_coding protein_coding MGP_BALBcJ_T0072659.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741320 90767626 + MGP_BALBcJ_P0072659 Art3 protein_coding protein_coding MGP_BALBcJ_T0072660.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741320 90767626 + MGP_BALBcJ_P0072660 Art3 protein_coding protein_coding MGP_BALBcJ_T0072661.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741320 90767626 + MGP_BALBcJ_P0072661 Art3 protein_coding protein_coding MGP_BALBcJ_T0072662.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90741320 90767627 + MGP_BALBcJ_P0072662 Art3 protein_coding protein_coding MGP_BALBcJ_T0072663.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90745764 90767626 + MGP_BALBcJ_P0072663 Art3 protein_coding protein_coding MGP_BALBcJ_T0072664.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90746238 90767627 + MGP_BALBcJ_P0072664 Art3 protein_coding protein_coding MGP_BALBcJ_T0072665.1 MGP_BALBcJ_G0029725.1 mouse_genomes_project 5 90754869 90767451 + MGP_BALBcJ_P0072665 Art3 protein_coding protein_coding MGP_BALBcJ_T0008220.1 MGP_BALBcJ_G0006696.1 mouse_genomes_project 5 103002189 103009445 - Gm42792 lincRNA lincRNA MGP_BALBcJ_T0001542.1 MGP_BALBcJ_G0001460.1 mouse_genomes_project 5 43211136 43212586 + TEC TEC MGP_BALBcJ_T0099931.1 MGP_BALBcJ_G0037967.1 mouse_genomes_project 5 68435930 68436037 - Gm26072 snRNA snRNA MGP_BALBcJ_T0008108.1 MGP_BALBcJ_G0006606.1 mouse_genomes_project 5 48179393 48322799 + Gm43016 lincRNA lincRNA MGP_BALBcJ_T0071726.1 MGP_BALBcJ_G0029532.1 mouse_genomes_project 5 51390609 51400803 - MGP_BALBcJ_P0071726 Cckar protein_coding protein_coding MGP_BALBcJ_T0071727.1 MGP_BALBcJ_G0029532.1 mouse_genomes_project 5 51397254 51398467 - Cckar protein_coding processed_transcript MGP_BALBcJ_T0014825.1 MGP_BALBcJ_G0012922.1 mouse_genomes_project 5 3669344 3669633 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073726.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115142840 115200107 + MGP_BALBcJ_P0073726 Gcn1l1 protein_coding protein_coding MGP_BALBcJ_T0073727.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115142858 115161743 + Gcn1l1 protein_coding retained_intron MGP_BALBcJ_T0073728.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115142860 115158788 + Gcn1l1 protein_coding retained_intron MGP_BALBcJ_T0073729.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115142862 115162264 + Gcn1l1 protein_coding retained_intron MGP_BALBcJ_T0073730.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115142889 115144807 + Gcn1l1 protein_coding retained_intron MGP_BALBcJ_T0073731.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115159902 115164939 + Gcn1l1 protein_coding processed_transcript MGP_BALBcJ_T0073732.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115183117 115200101 + Gcn1l1 protein_coding processed_transcript MGP_BALBcJ_T0073733.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115187251 115188024 + Gcn1l1 protein_coding retained_intron MGP_BALBcJ_T0073734.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115189245 115190841 + Gcn1l1 protein_coding processed_transcript MGP_BALBcJ_T0073735.1 MGP_BALBcJ_G0029949.1 mouse_genomes_project 5 115192323 115193471 + Gcn1l1 protein_coding retained_intron MGP_BALBcJ_T0015082.1 MGP_BALBcJ_G0013179.1 mouse_genomes_project 5 106449133 106449688 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001722.1 MGP_BALBcJ_G0001637.1 mouse_genomes_project 5 95703782 95704410 + TEC TEC MGP_BALBcJ_T0001518.1 MGP_BALBcJ_G0001436.1 mouse_genomes_project 5 40798757 40803274 - TEC TEC MGP_BALBcJ_T0015075.1 MGP_BALBcJ_G0013172.1 mouse_genomes_project 5 105224111 105224967 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101227.1 MGP_BALBcJ_G0039263.1 mouse_genomes_project 5 129630914 129631049 + Gm23245 snoRNA snoRNA MGP_BALBcJ_T0014936.1 MGP_BALBcJ_G0013033.1 mouse_genomes_project 5 41560497 41562255 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076133.1 MGP_BALBcJ_G0030399.1 mouse_genomes_project 5 152066021 152087072 - MGP_BALBcJ_P0076133 Vmn2r18 protein_coding protein_coding MGP_BALBcJ_T0008304.1 MGP_BALBcJ_G0006747.1 mouse_genomes_project 5 115984632 115986755 - 4930562A09Rik lincRNA lincRNA MGP_BALBcJ_T0004735.1 MGP_BALBcJ_G0004091.1 mouse_genomes_project 5 99566852 99573220 - 4930458D05Rik antisense antisense MGP_BALBcJ_T0015030.1 MGP_BALBcJ_G0013127.1 mouse_genomes_project 5 85378139 85379691 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073470.1 MGP_BALBcJ_G0029901.1 mouse_genomes_project 5 113309010 113310041 - MGP_BALBcJ_P0073470 Selplg protein_coding protein_coding MGP_BALBcJ_T0073471.1 MGP_BALBcJ_G0029901.1 mouse_genomes_project 5 113309021 113320841 - MGP_BALBcJ_P0073471 Selplg protein_coding protein_coding MGP_BALBcJ_T0073472.1 MGP_BALBcJ_G0029901.1 mouse_genomes_project 5 113309029 113309792 - MGP_BALBcJ_P0073472 Selplg protein_coding protein_coding MGP_BALBcJ_T0073473.1 MGP_BALBcJ_G0029901.1 mouse_genomes_project 5 113309029 113309732 - MGP_BALBcJ_P0073473 Selplg protein_coding protein_coding MGP_BALBcJ_T0073474.1 MGP_BALBcJ_G0029901.1 mouse_genomes_project 5 113310520 113322986 - MGP_BALBcJ_P0073474 Selplg protein_coding protein_coding MGP_BALBcJ_T0073475.1 MGP_BALBcJ_G0029901.1 mouse_genomes_project 5 113318500 113320812 - Selplg protein_coding retained_intron MGP_BALBcJ_T0075937.1 MGP_BALBcJ_G0030370.1 mouse_genomes_project 5 147699016 147706433 - MGP_BALBcJ_P0075937 Urad protein_coding protein_coding MGP_BALBcJ_T0073925.1 MGP_BALBcJ_G0029987.1 mouse_genomes_project 5 120345199 120376991 - MGP_BALBcJ_P0073925 Dtx1 protein_coding protein_coding MGP_BALBcJ_T0073926.1 MGP_BALBcJ_G0029987.1 mouse_genomes_project 5 120345200 120360395 - Dtx1 protein_coding retained_intron MGP_BALBcJ_T0073927.1 MGP_BALBcJ_G0029987.1 mouse_genomes_project 5 120345246 120347075 - Dtx1 protein_coding retained_intron MGP_BALBcJ_T0073928.1 MGP_BALBcJ_G0029987.1 mouse_genomes_project 5 120346198 120347911 - Dtx1 protein_coding retained_intron MGP_BALBcJ_T0073929.1 MGP_BALBcJ_G0029987.1 mouse_genomes_project 5 120346448 120347809 - Dtx1 protein_coding retained_intron MGP_BALBcJ_T0073930.1 MGP_BALBcJ_G0029987.1 mouse_genomes_project 5 120359712 120371128 - Dtx1 protein_coding processed_transcript MGP_BALBcJ_T0008423.1 MGP_BALBcJ_G0006830.1 mouse_genomes_project 5 148141273 148144931 + Gm43156 lincRNA lincRNA MGP_BALBcJ_T0001504.1 MGP_BALBcJ_G0001422.1 mouse_genomes_project 5 32180890 32183298 + TEC TEC MGP_BALBcJ_T0008344.1 MGP_BALBcJ_G0006775.1 mouse_genomes_project 5 123913598 123914754 - Gm16001 lincRNA lincRNA MGP_BALBcJ_T0008345.1 MGP_BALBcJ_G0006775.1 mouse_genomes_project 5 123913627 123914707 - Gm16001 lincRNA lincRNA MGP_BALBcJ_T0001793.1 MGP_BALBcJ_G0001708.1 mouse_genomes_project 5 120411475 120412748 + TEC TEC MGP_BALBcJ_T0099925.1 MGP_BALBcJ_G0037961.1 mouse_genomes_project 5 63577026 63577100 + Gm24399 snRNA snRNA MGP_BALBcJ_T0015144.1 MGP_BALBcJ_G0013241.1 mouse_genomes_project 5 137231722 137231969 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073263.1 MGP_BALBcJ_G0029860.1 mouse_genomes_project 5 109720877 109732598 - MGP_BALBcJ_P0073263 Pxmp2 protein_coding protein_coding MGP_BALBcJ_T0073264.1 MGP_BALBcJ_G0029860.1 mouse_genomes_project 5 109720890 109732433 - MGP_BALBcJ_P0073264 Pxmp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073265.1 MGP_BALBcJ_G0029860.1 mouse_genomes_project 5 109727204 109732414 - Pxmp2 protein_coding processed_transcript MGP_BALBcJ_T0073266.1 MGP_BALBcJ_G0029860.1 mouse_genomes_project 5 109729924 109732531 - Pxmp2 protein_coding retained_intron MGP_BALBcJ_T0001503.1 MGP_BALBcJ_G0001421.1 mouse_genomes_project 5 32163229 32166761 + TEC TEC MGP_BALBcJ_T0010655.1 MGP_BALBcJ_G0008780.1 mouse_genomes_project 5 32268202 32268265 + Mir7036b miRNA miRNA MGP_BALBcJ_T0074098.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121923209 121940841 + MGP_BALBcJ_P0074098 Ppp1cc protein_coding protein_coding MGP_BALBcJ_T0074099.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121923287 121940837 + MGP_BALBcJ_P0074099 Ppp1cc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074100.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121923287 121940841 + MGP_BALBcJ_P0074100 Ppp1cc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074101.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121923287 121940841 + MGP_BALBcJ_P0074101 Ppp1cc protein_coding protein_coding MGP_BALBcJ_T0074102.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121923524 121940664 + MGP_BALBcJ_P0074102 Ppp1cc protein_coding protein_coding MGP_BALBcJ_T0074103.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121923888 121934667 + Ppp1cc protein_coding retained_intron MGP_BALBcJ_T0074104.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121933868 121940833 + MGP_BALBcJ_P0074104 Ppp1cc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074105.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121937190 121938379 + Ppp1cc protein_coding retained_intron MGP_BALBcJ_T0074106.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121937465 121940833 + MGP_BALBcJ_P0074106 Ppp1cc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074107.1 MGP_BALBcJ_G0030019.1 mouse_genomes_project 5 121938250 121940147 + MGP_BALBcJ_P0074107 Ppp1cc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075695.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143513096 143525864 - MGP_BALBcJ_P0075695 Zdhhc4 protein_coding protein_coding MGP_BALBcJ_T0075696.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143513097 143525828 - MGP_BALBcJ_P0075696 Zdhhc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075697.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143513104 143522962 - MGP_BALBcJ_P0075697 Zdhhc4 protein_coding protein_coding MGP_BALBcJ_T0075698.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143516989 143525819 - Zdhhc4 protein_coding processed_transcript MGP_BALBcJ_T0075699.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143517044 143525831 - MGP_BALBcJ_P0075699 Zdhhc4 protein_coding protein_coding MGP_BALBcJ_T0075700.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143517050 143525822 - MGP_BALBcJ_P0075700 Zdhhc4 protein_coding protein_coding MGP_BALBcJ_T0075701.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143520740 143525837 - MGP_BALBcJ_P0075701 Zdhhc4 protein_coding protein_coding MGP_BALBcJ_T0075702.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143520827 143525837 - Zdhhc4 protein_coding processed_transcript MGP_BALBcJ_T0075703.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143520842 143525836 - MGP_BALBcJ_P0075703 Zdhhc4 protein_coding protein_coding MGP_BALBcJ_T0075704.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143520940 143525177 - Zdhhc4 protein_coding retained_intron MGP_BALBcJ_T0075705.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143522600 143525797 - Zdhhc4 protein_coding processed_transcript MGP_BALBcJ_T0075706.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143522663 143525800 - Zdhhc4 protein_coding processed_transcript MGP_BALBcJ_T0075707.1 MGP_BALBcJ_G0030315.1 mouse_genomes_project 5 143524902 143525810 - Zdhhc4 protein_coding processed_transcript MGP_BALBcJ_T0010669.1 MGP_BALBcJ_G0008794.1 mouse_genomes_project 5 67263131 67263237 + Gm24368 miRNA miRNA MGP_BALBcJ_T0074932.1 MGP_BALBcJ_G0030154.1 mouse_genomes_project 5 135053648 135067213 + MGP_BALBcJ_P0074932 Bcl7b protein_coding protein_coding MGP_BALBcJ_T0074933.1 MGP_BALBcJ_G0030154.1 mouse_genomes_project 5 135053754 135058814 + MGP_BALBcJ_P0074933 Bcl7b protein_coding protein_coding MGP_BALBcJ_T0074934.1 MGP_BALBcJ_G0030154.1 mouse_genomes_project 5 135053777 135067189 + MGP_BALBcJ_P0074934 Bcl7b protein_coding protein_coding MGP_BALBcJ_T0074935.1 MGP_BALBcJ_G0030154.1 mouse_genomes_project 5 135053810 135065953 + MGP_BALBcJ_P0074935 Bcl7b protein_coding protein_coding MGP_BALBcJ_T0074936.1 MGP_BALBcJ_G0030154.1 mouse_genomes_project 5 135064939 135066483 + Bcl7b protein_coding retained_intron MGP_BALBcJ_T0014913.1 MGP_BALBcJ_G0013010.1 mouse_genomes_project 5 30746276 30746639 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014990.1 MGP_BALBcJ_G0013087.1 mouse_genomes_project 5 64839955 64840466 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073503.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113563703 113586609 + Usp30 protein_coding processed_transcript MGP_BALBcJ_T0073504.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113563756 113603022 + MGP_BALBcJ_P0073504 Usp30 protein_coding protein_coding MGP_BALBcJ_T0073505.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113563992 113584110 + Usp30 protein_coding processed_transcript MGP_BALBcJ_T0073506.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113597485 113623262 + MGP_BALBcJ_P0073506 Usp30 protein_coding protein_coding MGP_BALBcJ_T0073507.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113597530 113619638 + MGP_BALBcJ_P0073507 Usp30 protein_coding protein_coding MGP_BALBcJ_T0073508.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113600882 113609491 + Usp30 protein_coding retained_intron MGP_BALBcJ_T0073509.1 MGP_BALBcJ_G0029906.1 mouse_genomes_project 5 113608300 113608820 + Usp30 protein_coding retained_intron MGP_BALBcJ_T0001713.1 MGP_BALBcJ_G0001628.1 mouse_genomes_project 5 91433671 91435809 + TEC TEC MGP_BALBcJ_T0101221.1 MGP_BALBcJ_G0039257.1 mouse_genomes_project 5 106893487 106893619 + Gm22270 snoRNA snoRNA MGP_BALBcJ_T0070647.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729673 27758681 + MGP_BALBcJ_P0070647 Hadhb protein_coding protein_coding MGP_BALBcJ_T0070648.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729683 27749340 + MGP_BALBcJ_P0070648 Hadhb protein_coding protein_coding MGP_BALBcJ_T0070649.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729697 27758674 + MGP_BALBcJ_P0070649 Hadhb protein_coding protein_coding MGP_BALBcJ_T0070650.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729697 27758670 + MGP_BALBcJ_P0070650 Hadhb protein_coding protein_coding MGP_BALBcJ_T0070651.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729698 27758679 + MGP_BALBcJ_P0070651 Hadhb protein_coding unknown_likely_coding MGP_BALBcJ_T0070652.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729700 27742665 + Hadhb protein_coding retained_intron MGP_BALBcJ_T0070653.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27729728 27751278 + MGP_BALBcJ_P0070653 Hadhb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070654.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27749344 27753479 + Hadhb protein_coding retained_intron MGP_BALBcJ_T0070655.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27752945 27755360 + Hadhb protein_coding retained_intron MGP_BALBcJ_T0070656.1 MGP_BALBcJ_G0029362.1 mouse_genomes_project 5 27754616 27758544 + Hadhb protein_coding retained_intron MGP_BALBcJ_T0074486.1 MGP_BALBcJ_G0030077.1 mouse_genomes_project 5 124382709 124391935 - MGP_BALBcJ_P0074486 Eif2b1 protein_coding protein_coding MGP_BALBcJ_T0074487.1 MGP_BALBcJ_G0030077.1 mouse_genomes_project 5 124384250 124387416 - Eif2b1 protein_coding retained_intron MGP_BALBcJ_T0074488.1 MGP_BALBcJ_G0030077.1 mouse_genomes_project 5 124385580 124391865 - MGP_BALBcJ_P0074488 Eif2b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074489.1 MGP_BALBcJ_G0030077.1 mouse_genomes_project 5 124386230 124391879 - MGP_BALBcJ_P0074489 Eif2b1 protein_coding protein_coding MGP_BALBcJ_T0074490.1 MGP_BALBcJ_G0030077.1 mouse_genomes_project 5 124389605 124391796 - MGP_BALBcJ_P0074490 Eif2b1 protein_coding protein_coding MGP_BALBcJ_T0074491.1 MGP_BALBcJ_G0030077.1 mouse_genomes_project 5 124391322 124391836 - MGP_BALBcJ_P0074491 Eif2b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015130.1 MGP_BALBcJ_G0013227.1 mouse_genomes_project 5 125201518 125202215 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001511.1 MGP_BALBcJ_G0001429.1 mouse_genomes_project 5 34589204 34589337 + TEC TEC MGP_BALBcJ_T0008250.1 MGP_BALBcJ_G0006716.1 mouse_genomes_project 5 109707331 109716410 + Gm26718 lincRNA lincRNA MGP_BALBcJ_T0075928.1 MGP_BALBcJ_G0030366.1 mouse_genomes_project 5 147454200 147456235 + MGP_BALBcJ_P0075928 Polr1d protein_coding protein_coding MGP_BALBcJ_T0075929.1 MGP_BALBcJ_G0030366.1 mouse_genomes_project 5 147454497 147489018 + MGP_BALBcJ_P0075929 Polr1d protein_coding protein_coding MGP_BALBcJ_T0075930.1 MGP_BALBcJ_G0030366.1 mouse_genomes_project 5 147454699 147489254 + MGP_BALBcJ_P0075930 Polr1d protein_coding protein_coding MGP_BALBcJ_T0075931.1 MGP_BALBcJ_G0030366.1 mouse_genomes_project 5 147454715 147489231 + MGP_BALBcJ_P0075931 Polr1d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075932.1 MGP_BALBcJ_G0030366.1 mouse_genomes_project 5 147478193 147488527 + Polr1d protein_coding retained_intron MGP_BALBcJ_T0075933.1 MGP_BALBcJ_G0030366.1 mouse_genomes_project 5 147483025 147488643 + Polr1d protein_coding processed_transcript MGP_BALBcJ_T0018089.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28493034 28496377 + Abhd1 processed_transcript processed_transcript MGP_BALBcJ_T0018090.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28493034 28498065 + Abhd1 processed_transcript processed_transcript MGP_BALBcJ_T0018091.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28493057 28498063 + Abhd1 processed_transcript retained_intron MGP_BALBcJ_T0018092.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28493057 28496687 + Abhd1 processed_transcript processed_transcript MGP_BALBcJ_T0018093.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28493060 28497673 + Abhd1 processed_transcript processed_transcript MGP_BALBcJ_T0018094.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28493074 28498063 + Abhd1 processed_transcript processed_transcript MGP_BALBcJ_T0018095.1 MGP_BALBcJ_G0015531.1 mouse_genomes_project 5 28496347 28497158 + Abhd1 processed_transcript retained_intron MGP_BALBcJ_T0014941.1 MGP_BALBcJ_G0013038.1 mouse_genomes_project 5 45385888 45386336 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070480.1 MGP_BALBcJ_G0029324.1 mouse_genomes_project 5 21990415 22017096 - MGP_BALBcJ_P0070480 Gbx1 protein_coding protein_coding MGP_BALBcJ_T0001900.1 MGP_BALBcJ_G0001813.1 mouse_genomes_project 5 148969680 148970326 - TEC TEC MGP_BALBcJ_T0001538.1 MGP_BALBcJ_G0001456.1 mouse_genomes_project 5 42333542 42337179 - TEC TEC MGP_BALBcJ_T0008249.1 MGP_BALBcJ_G0006715.1 mouse_genomes_project 5 109238389 109245226 + lincRNA lincRNA MGP_BALBcJ_T0008147.1 MGP_BALBcJ_G0006637.1 mouse_genomes_project 5 72703721 72706701 - Gm15985 lincRNA lincRNA MGP_BALBcJ_T0101710.1 MGP_BALBcJ_G0039688.1 mouse_genomes_project 5 30813521 30814683 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101711.1 MGP_BALBcJ_G0039688.1 mouse_genomes_project 5 30814208 30814995 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0010704.1 MGP_BALBcJ_G0008829.1 mouse_genomes_project 5 135643029 135643113 - Mir7034 miRNA miRNA MGP_BALBcJ_T0001591.1 MGP_BALBcJ_G0001508.1 mouse_genomes_project 5 49778491 49781469 - TEC TEC MGP_BALBcJ_T0075512.1 MGP_BALBcJ_G0030272.1 mouse_genomes_project 5 139575820 139589474 - MGP_BALBcJ_P0075512 Zfand2a protein_coding protein_coding MGP_BALBcJ_T0075513.1 MGP_BALBcJ_G0030272.1 mouse_genomes_project 5 139575825 139589442 - MGP_BALBcJ_P0075513 Zfand2a protein_coding protein_coding MGP_BALBcJ_T0075514.1 MGP_BALBcJ_G0030272.1 mouse_genomes_project 5 139579527 139583550 - Zfand2a protein_coding processed_transcript MGP_BALBcJ_T0075515.1 MGP_BALBcJ_G0030272.1 mouse_genomes_project 5 139583088 139589389 - MGP_BALBcJ_P0075515 Zfand2a protein_coding protein_coding MGP_BALBcJ_T0075516.1 MGP_BALBcJ_G0030272.1 mouse_genomes_project 5 139583683 139589353 - Zfand2a protein_coding processed_transcript MGP_BALBcJ_T0069964.1 MGP_BALBcJ_G0029240.1 mouse_genomes_project 5 512287 524892 - MGP_BALBcJ_P0069964 Rbm48 protein_coding protein_coding MGP_BALBcJ_T0069965.1 MGP_BALBcJ_G0029240.1 mouse_genomes_project 5 513085 524366 - MGP_BALBcJ_P0069965 Rbm48 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069966.1 MGP_BALBcJ_G0029240.1 mouse_genomes_project 5 519089 520453 - Rbm48 protein_coding retained_intron MGP_BALBcJ_T0069967.1 MGP_BALBcJ_G0029240.1 mouse_genomes_project 5 519793 524389 - Rbm48 protein_coding retained_intron MGP_BALBcJ_T0069968.1 MGP_BALBcJ_G0029240.1 mouse_genomes_project 5 520567 524509 - MGP_BALBcJ_P0069968 Rbm48 protein_coding protein_coding MGP_BALBcJ_T0001533.1 MGP_BALBcJ_G0001451.1 mouse_genomes_project 5 42166434 42167337 - TEC TEC MGP_BALBcJ_T0001854.1 MGP_BALBcJ_G0001768.1 mouse_genomes_project 5 131780531 131781505 - TEC TEC MGP_BALBcJ_T0018083.1 MGP_BALBcJ_G0015528.1 mouse_genomes_project 5 2135397 2138059 - Gm43623 processed_transcript processed_transcript MGP_BALBcJ_T0072164.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72175671 72500407 - MGP_BALBcJ_P0072164 Scfd2 protein_coding protein_coding MGP_BALBcJ_T0072165.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72175941 72260733 - Scfd2 protein_coding processed_transcript MGP_BALBcJ_T0072166.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72176920 72196542 - Scfd2 protein_coding retained_intron MGP_BALBcJ_T0072167.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72176922 72500410 - MGP_BALBcJ_P0072167 Scfd2 protein_coding protein_coding MGP_BALBcJ_T0072168.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72368803 72371405 - MGP_BALBcJ_P0072168 Scfd2 protein_coding protein_coding MGP_BALBcJ_T0072169.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72422647 72500387 - MGP_BALBcJ_P0072169 Scfd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072170.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72431145 72500417 - MGP_BALBcJ_P0072170 Scfd2 protein_coding protein_coding MGP_BALBcJ_T0072171.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72433258 72453707 - Scfd2 protein_coding retained_intron MGP_BALBcJ_T0072172.1 MGP_BALBcJ_G0029609.1 mouse_genomes_project 5 72482811 72500400 - Scfd2 protein_coding processed_transcript MGP_BALBcJ_T0070026.1 MGP_BALBcJ_G0029249.1 mouse_genomes_project 5 1007826 1029252 - MGP_BALBcJ_P0070026 Cyp51 protein_coding protein_coding MGP_BALBcJ_T0070027.1 MGP_BALBcJ_G0029249.1 mouse_genomes_project 5 1009960 1028849 - Cyp51 protein_coding processed_transcript MGP_BALBcJ_T0070028.1 MGP_BALBcJ_G0029249.1 mouse_genomes_project 5 1023781 1027887 - Cyp51 protein_coding retained_intron MGP_BALBcJ_T0070029.1 MGP_BALBcJ_G0029249.1 mouse_genomes_project 5 1025554 1028927 - Cyp51 protein_coding retained_intron MGP_BALBcJ_T0073146.1 MGP_BALBcJ_G0029833.1 mouse_genomes_project 5 107466229 107512152 + MGP_BALBcJ_P0073146 Pcgf3 protein_coding protein_coding MGP_BALBcJ_T0073147.1 MGP_BALBcJ_G0029833.1 mouse_genomes_project 5 107466229 107494917 + MGP_BALBcJ_P0073147 Pcgf3 protein_coding protein_coding MGP_BALBcJ_T0073148.1 MGP_BALBcJ_G0029833.1 mouse_genomes_project 5 107466310 107491439 + MGP_BALBcJ_P0073148 Pcgf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073149.1 MGP_BALBcJ_G0029833.1 mouse_genomes_project 5 107477086 107509530 + MGP_BALBcJ_P0073149 Pcgf3 protein_coding unknown_likely_coding MGP_BALBcJ_T0073150.1 MGP_BALBcJ_G0029833.1 mouse_genomes_project 5 107478883 107483485 + Pcgf3 protein_coding retained_intron MGP_BALBcJ_T0073151.1 MGP_BALBcJ_G0029833.1 mouse_genomes_project 5 107492175 107501437 + Pcgf3 protein_coding retained_intron MGP_BALBcJ_T0102564.1 MGP_BALBcJ_G0040380.1 mouse_genomes_project 5 66477092 66503148 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004753.1 MGP_BALBcJ_G0004106.1 mouse_genomes_project 5 110232790 110241552 + Gm15559 antisense antisense MGP_BALBcJ_T0018134.1 MGP_BALBcJ_G0015547.1 mouse_genomes_project 5 106693416 106695364 + A430072P03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018135.1 MGP_BALBcJ_G0015547.1 mouse_genomes_project 5 106694657 106697061 + A430072P03Rik processed_transcript processed_transcript MGP_BALBcJ_T0099913.1 MGP_BALBcJ_G0037949.1 mouse_genomes_project 5 29775255 29775362 + Gm26335 snRNA snRNA MGP_BALBcJ_T0001824.1 MGP_BALBcJ_G0001738.1 mouse_genomes_project 5 125238370 125241235 + TEC TEC MGP_BALBcJ_T0075914.1 MGP_BALBcJ_G0030362.1 mouse_genomes_project 5 147218418 147221056 + MGP_BALBcJ_P0075914 Rasl11a protein_coding protein_coding MGP_BALBcJ_T0075915.1 MGP_BALBcJ_G0030362.1 mouse_genomes_project 5 147219096 147220715 + Rasl11a protein_coding retained_intron MGP_BALBcJ_T0001461.1 MGP_BALBcJ_G0001382.1 mouse_genomes_project 5 13472483 13475135 + TEC TEC MGP_BALBcJ_T0072495.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86939954 87015279 + MGP_BALBcJ_P0072495 Rufy3 protein_coding protein_coding MGP_BALBcJ_T0072496.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86939954 87023938 + MGP_BALBcJ_P0072496 Rufy3 protein_coding protein_coding MGP_BALBcJ_T0072497.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86962411 87013511 + MGP_BALBcJ_P0072497 Rufy3 protein_coding protein_coding MGP_BALBcJ_T0072498.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86962434 87015280 + MGP_BALBcJ_P0072498 Rufy3 protein_coding protein_coding MGP_BALBcJ_T0072499.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86962475 86964811 + Rufy3 protein_coding retained_intron MGP_BALBcJ_T0072500.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86962476 86990273 + Rufy3 protein_coding retained_intron MGP_BALBcJ_T0072501.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 86962692 87013512 + MGP_BALBcJ_P0072501 Rufy3 protein_coding protein_coding MGP_BALBcJ_T0072502.1 MGP_BALBcJ_G0029686.1 mouse_genomes_project 5 87019274 87020902 + Rufy3 protein_coding retained_intron MGP_BALBcJ_T0101201.1 MGP_BALBcJ_G0039237.1 mouse_genomes_project 5 61887217 61887349 - Gm25608 snoRNA snoRNA MGP_BALBcJ_T0001833.1 MGP_BALBcJ_G0001747.1 mouse_genomes_project 5 128536775 128537444 - TEC TEC MGP_BALBcJ_T0001548.1 MGP_BALBcJ_G0001466.1 mouse_genomes_project 5 44139946 44141133 + TEC TEC MGP_BALBcJ_T0071022.1 MGP_BALBcJ_G0029418.1 mouse_genomes_project 5 30775016 30835339 + MGP_BALBcJ_P0071022 Slc5a1 protein_coding protein_coding MGP_BALBcJ_T0098983.1 MGP_BALBcJ_G0037029.1 mouse_genomes_project 5 144455557 144459147 + Gm15708 sense_intronic sense_intronic MGP_BALBcJ_T0098984.1 MGP_BALBcJ_G0037029.1 mouse_genomes_project 5 144457529 144459113 + Gm15708 sense_intronic sense_intronic MGP_BALBcJ_T0072099.1 MGP_BALBcJ_G0029597.1 mouse_genomes_project 5 70962141 70972623 + MGP_BALBcJ_P0072099 Gm5868 protein_coding protein_coding MGP_BALBcJ_T0001729.1 MGP_BALBcJ_G0001644.1 mouse_genomes_project 5 99609306 99611656 + TEC TEC MGP_BALBcJ_T0073931.1 MGP_BALBcJ_G0029988.1 mouse_genomes_project 5 120395742 120415292 - MGP_BALBcJ_P0073931 Oas2 protein_coding protein_coding MGP_BALBcJ_T0073932.1 MGP_BALBcJ_G0029988.1 mouse_genomes_project 5 120395743 120415292 - MGP_BALBcJ_P0073932 Oas2 protein_coding protein_coding MGP_BALBcJ_T0073933.1 MGP_BALBcJ_G0029988.1 mouse_genomes_project 5 120395745 120401149 - Oas2 protein_coding retained_intron MGP_BALBcJ_T0073934.1 MGP_BALBcJ_G0029988.1 mouse_genomes_project 5 120398693 120403982 - MGP_BALBcJ_P0073934 Oas2 protein_coding protein_coding MGP_BALBcJ_T0001782.1 MGP_BALBcJ_G0001697.1 mouse_genomes_project 5 117643024 117643946 - TEC TEC MGP_BALBcJ_T0073212.1 MGP_BALBcJ_G0029850.1 mouse_genomes_project 5 108533651 108564341 + MGP_BALBcJ_P0073212 Vmn2r16 protein_coding protein_coding MGP_BALBcJ_T0001775.1 MGP_BALBcJ_G0001690.1 mouse_genomes_project 5 115973824 115975287 - TEC TEC MGP_BALBcJ_T0070166.1 MGP_BALBcJ_G0029269.1 mouse_genomes_project 5 5986273 6017619 - MGP_BALBcJ_P0070166 Crot protein_coding protein_coding MGP_BALBcJ_T0070167.1 MGP_BALBcJ_G0029269.1 mouse_genomes_project 5 5993848 6002426 - Crot protein_coding processed_transcript MGP_BALBcJ_T0070168.1 MGP_BALBcJ_G0029269.1 mouse_genomes_project 5 6006462 6017337 - Crot protein_coding retained_intron MGP_BALBcJ_T0001453.1 MGP_BALBcJ_G0001374.1 mouse_genomes_project 5 11586957 11589835 + TEC TEC MGP_BALBcJ_T0004713.1 MGP_BALBcJ_G0004078.1 mouse_genomes_project 5 86232579 86235444 + BC051076 antisense antisense MGP_BALBcJ_T0004714.1 MGP_BALBcJ_G0004078.1 mouse_genomes_project 5 86232579 86235447 + BC051076 antisense antisense MGP_BALBcJ_T0001681.1 MGP_BALBcJ_G0001596.1 mouse_genomes_project 5 70973570 70976065 + TEC TEC MGP_BALBcJ_T0001571.1 MGP_BALBcJ_G0001488.1 mouse_genomes_project 5 46744774 46745406 - TEC TEC MGP_BALBcJ_T0072552.1 MGP_BALBcJ_G0029698.1 mouse_genomes_project 5 88847993 88866148 + MGP_BALBcJ_P0072552 Afp protein_coding protein_coding MGP_BALBcJ_T0072553.1 MGP_BALBcJ_G0029698.1 mouse_genomes_project 5 88847995 88853304 + MGP_BALBcJ_P0072553 Afp protein_coding protein_coding MGP_BALBcJ_T0072554.1 MGP_BALBcJ_G0029698.1 mouse_genomes_project 5 88848482 88853354 + Afp protein_coding retained_intron MGP_BALBcJ_T0072555.1 MGP_BALBcJ_G0029698.1 mouse_genomes_project 5 88858774 88861413 + Afp protein_coding retained_intron MGP_BALBcJ_T0072556.1 MGP_BALBcJ_G0029698.1 mouse_genomes_project 5 88864672 88866094 + Afp protein_coding retained_intron MGP_BALBcJ_T0102574.1 MGP_BALBcJ_G0040390.1 mouse_genomes_project 5 86562571 86566991 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0014971.1 MGP_BALBcJ_G0013068.1 mouse_genomes_project 5 58385145 58385567 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070381.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21212529 21257081 - MGP_BALBcJ_P0070381 Pus7 protein_coding protein_coding MGP_BALBcJ_T0070382.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21212530 21256923 - MGP_BALBcJ_P0070382 Pus7 protein_coding protein_coding MGP_BALBcJ_T0070383.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21212537 21252675 - MGP_BALBcJ_P0070383 Pus7 protein_coding protein_coding MGP_BALBcJ_T0070384.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21214809 21222629 - Pus7 protein_coding processed_transcript MGP_BALBcJ_T0070385.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21215886 21235409 - MGP_BALBcJ_P0070385 Pus7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070386.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21221891 21235446 - Pus7 protein_coding processed_transcript MGP_BALBcJ_T0070387.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21223048 21227585 - Pus7 protein_coding processed_transcript MGP_BALBcJ_T0070388.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21233318 21251477 - MGP_BALBcJ_P0070388 Pus7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070389.1 MGP_BALBcJ_G0029308.1 mouse_genomes_project 5 21245543 21248738 - Pus7 protein_coding retained_intron MGP_BALBcJ_T0010667.1 MGP_BALBcJ_G0008792.1 mouse_genomes_project 5 63920265 63920339 + Gm25952 miRNA miRNA MGP_BALBcJ_T0008202.1 MGP_BALBcJ_G0006683.1 mouse_genomes_project 5 98612866 98622097 + lincRNA lincRNA MGP_BALBcJ_T0070390.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261062 21263361 + MGP_BALBcJ_P0070390 Rint1 protein_coding protein_coding MGP_BALBcJ_T0070391.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261062 21295571 + MGP_BALBcJ_P0070391 Rint1 protein_coding protein_coding MGP_BALBcJ_T0070392.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261063 21267189 + MGP_BALBcJ_P0070392 Rint1 protein_coding protein_coding MGP_BALBcJ_T0070393.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261066 21295499 + MGP_BALBcJ_P0070393 Rint1 protein_coding protein_coding MGP_BALBcJ_T0070394.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261070 21295570 + Rint1 protein_coding retained_intron MGP_BALBcJ_T0070395.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261072 21263386 + Rint1 protein_coding retained_intron MGP_BALBcJ_T0070396.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21261092 21270329 + Rint1 protein_coding processed_transcript MGP_BALBcJ_T0070397.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21279065 21282388 + Rint1 protein_coding retained_intron MGP_BALBcJ_T0070398.1 MGP_BALBcJ_G0029309.1 mouse_genomes_project 5 21283983 21291122 + Rint1 protein_coding processed_transcript MGP_BALBcJ_T0001719.1 MGP_BALBcJ_G0001634.1 mouse_genomes_project 5 95566839 95567385 - TEC TEC MGP_BALBcJ_T0001771.1 MGP_BALBcJ_G0001686.1 mouse_genomes_project 5 114984937 114986838 - TEC TEC MGP_BALBcJ_T0015162.1 MGP_BALBcJ_G0013259.1 mouse_genomes_project 5 143022299 143022883 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098766.1 MGP_BALBcJ_G0036820.1 mouse_genomes_project 5 1973449 1973577 - Gm22897 scaRNA scaRNA MGP_BALBcJ_T0008274.1 MGP_BALBcJ_G0006729.1 mouse_genomes_project 5 111674693 111690842 - Miat lincRNA lincRNA MGP_BALBcJ_T0008275.1 MGP_BALBcJ_G0006729.1 mouse_genomes_project 5 111674695 111690395 - Miat lincRNA lincRNA MGP_BALBcJ_T0008277.1 MGP_BALBcJ_G0006729.1 mouse_genomes_project 5 111682835 111690091 - Miat lincRNA lincRNA MGP_BALBcJ_T0008278.1 MGP_BALBcJ_G0006729.1 mouse_genomes_project 5 111683126 111690376 - Miat lincRNA lincRNA MGP_BALBcJ_T0008279.1 MGP_BALBcJ_G0006729.1 mouse_genomes_project 5 111683324 111690122 - Miat lincRNA lincRNA MGP_BALBcJ_T0008280.1 MGP_BALBcJ_G0006729.1 mouse_genomes_project 5 111689552 111690088 - Miat lincRNA lincRNA MGP_BALBcJ_T0015195.1 MGP_BALBcJ_G0013292.1 mouse_genomes_project 5 150737552 150737940 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098963.1 MGP_BALBcJ_G0037010.1 mouse_genomes_project 5 41518801 41520080 + Gm16014 sense_intronic sense_intronic MGP_BALBcJ_T0014987.1 MGP_BALBcJ_G0013084.1 mouse_genomes_project 5 62202813 62203312 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010652.1 MGP_BALBcJ_G0008777.1 mouse_genomes_project 5 28191794 28191874 + Mir5625 miRNA miRNA MGP_BALBcJ_T0098605.1 MGP_BALBcJ_G0036659.1 mouse_genomes_project 5 489501 489621 + n-R5s169 rRNA rRNA MGP_BALBcJ_T0014980.1 MGP_BALBcJ_G0013077.1 mouse_genomes_project 5 62069415 62070367 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001590.1 MGP_BALBcJ_G0001507.1 mouse_genomes_project 5 49718090 49720535 - TEC TEC MGP_BALBcJ_T0001601.1 MGP_BALBcJ_G0001518.1 mouse_genomes_project 5 55405433 55405588 + TEC TEC MGP_BALBcJ_T0010686.1 MGP_BALBcJ_G0008811.1 mouse_genomes_project 5 112812760 112812813 - Mir7229 miRNA miRNA MGP_BALBcJ_T0099927.1 MGP_BALBcJ_G0037963.1 mouse_genomes_project 5 67304361 67304468 - Gm23932 snRNA snRNA MGP_BALBcJ_T0071051.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31281192 31296447 - MGP_BALBcJ_P0071051 Fam53a protein_coding unknown_likely_coding MGP_BALBcJ_T0071052.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31281201 31310201 - MGP_BALBcJ_P0071052 Fam53a protein_coding protein_coding MGP_BALBcJ_T0071053.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31281201 31310877 - MGP_BALBcJ_P0071053 Fam53a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071054.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31289061 31310872 - MGP_BALBcJ_P0071054 Fam53a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071055.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31289234 31310888 - MGP_BALBcJ_P0071055 Fam53a protein_coding protein_coding MGP_BALBcJ_T0071056.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31291306 31310351 - MGP_BALBcJ_P0071056 Fam53a protein_coding protein_coding MGP_BALBcJ_T0071057.1 MGP_BALBcJ_G0029424.1 mouse_genomes_project 5 31296115 31310894 - Fam53a protein_coding processed_transcript MGP_BALBcJ_T0075708.1 MGP_BALBcJ_G0030316.1 mouse_genomes_project 5 143554255 143589392 + MGP_BALBcJ_P0075708 Grid2ip protein_coding protein_coding MGP_BALBcJ_T0075709.1 MGP_BALBcJ_G0030316.1 mouse_genomes_project 5 143560729 143589422 + MGP_BALBcJ_P0075709 Grid2ip protein_coding protein_coding MGP_BALBcJ_T0075710.1 MGP_BALBcJ_G0030316.1 mouse_genomes_project 5 143566882 143589776 + MGP_BALBcJ_P0075710 Grid2ip protein_coding protein_coding MGP_BALBcJ_T0075711.1 MGP_BALBcJ_G0030316.1 mouse_genomes_project 5 143569764 143572524 + Grid2ip protein_coding retained_intron MGP_BALBcJ_T0075712.1 MGP_BALBcJ_G0030316.1 mouse_genomes_project 5 143572251 143577327 + Grid2ip protein_coding retained_intron MGP_BALBcJ_T0099969.1 MGP_BALBcJ_G0038005.1 mouse_genomes_project 5 123146057 123146226 + Gm23458 snRNA snRNA MGP_BALBcJ_T0001761.1 MGP_BALBcJ_G0001676.1 mouse_genomes_project 5 112626878 112627259 + TEC TEC MGP_BALBcJ_T0074214.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122637686 122757097 - MGP_BALBcJ_P0074214 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074215.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122637689 122666072 - MGP_BALBcJ_P0074215 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074216.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122637700 122757294 - MGP_BALBcJ_P0074216 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074217.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122637702 122756531 - MGP_BALBcJ_P0074217 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074218.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122638208 122756479 - MGP_BALBcJ_P0074218 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074219.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122639161 122757782 - MGP_BALBcJ_P0074219 Kdm2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074220.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122643477 122649069 - Kdm2b protein_coding retained_intron MGP_BALBcJ_T0074221.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122648491 122654291 - MGP_BALBcJ_P0074221 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074222.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122648618 122650217 - Kdm2b protein_coding retained_intron MGP_BALBcJ_T0074223.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122650199 122684435 - Kdm2b protein_coding processed_transcript MGP_BALBcJ_T0074224.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122651411 122688756 - Kdm2b protein_coding processed_transcript MGP_BALBcJ_T0074225.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122651421 122688197 - Kdm2b protein_coding retained_intron MGP_BALBcJ_T0074226.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122653715 122757090 - Kdm2b protein_coding retained_intron MGP_BALBcJ_T0074227.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122699388 122756534 - MGP_BALBcJ_P0074227 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074228.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122699491 122720095 - MGP_BALBcJ_P0074228 Kdm2b protein_coding protein_coding MGP_BALBcJ_T0074229.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122699574 122715573 - Kdm2b protein_coding processed_transcript MGP_BALBcJ_T0074230.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122701743 122720703 - Kdm2b protein_coding processed_transcript MGP_BALBcJ_T0074231.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122701763 122719579 - Kdm2b protein_coding processed_transcript MGP_BALBcJ_T0074232.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122707529 122757097 - Kdm2b protein_coding retained_intron MGP_BALBcJ_T0074233.1 MGP_BALBcJ_G0030036.1 mouse_genomes_project 5 122715313 122753007 - Kdm2b protein_coding processed_transcript MGP_BALBcJ_T0001537.1 MGP_BALBcJ_G0001455.1 mouse_genomes_project 5 42318068 42320067 - TEC TEC MGP_BALBcJ_T0075225.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137502272 137521052 + MGP_BALBcJ_P0075225 Tfr2 protein_coding protein_coding MGP_BALBcJ_T0075226.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137502283 137521054 + MGP_BALBcJ_P0075226 Tfr2 protein_coding protein_coding MGP_BALBcJ_T0075227.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137502296 137503795 + Tfr2 protein_coding retained_intron MGP_BALBcJ_T0075228.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137502301 137521052 + MGP_BALBcJ_P0075228 Tfr2 protein_coding protein_coding MGP_BALBcJ_T0075229.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137503152 137521038 + MGP_BALBcJ_P0075229 Tfr2 protein_coding protein_coding MGP_BALBcJ_T0075230.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137503237 137521049 + MGP_BALBcJ_P0075230 Tfr2 protein_coding protein_coding MGP_BALBcJ_T0075231.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137503883 137506895 + Tfr2 protein_coding retained_intron MGP_BALBcJ_T0075232.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137506987 137510218 + Tfr2 protein_coding retained_intron MGP_BALBcJ_T0075233.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137511878 137513818 + MGP_BALBcJ_P0075233 Tfr2 protein_coding protein_coding MGP_BALBcJ_T0075234.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137516857 137520562 + Tfr2 protein_coding retained_intron MGP_BALBcJ_T0075235.1 MGP_BALBcJ_G0030210.1 mouse_genomes_project 5 137516857 137517682 + Tfr2 protein_coding retained_intron MGP_BALBcJ_T0004732.1 MGP_BALBcJ_G0004089.1 mouse_genomes_project 5 98784746 98802576 + Tmem150cos antisense antisense MGP_BALBcJ_T0004733.1 MGP_BALBcJ_G0004089.1 mouse_genomes_project 5 98799326 98802700 + Tmem150cos antisense antisense MGP_BALBcJ_T0071463.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36022392 36141470 - MGP_BALBcJ_P0071463 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071464.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36022392 36144593 - MGP_BALBcJ_P0071464 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071465.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36022393 36154359 - MGP_BALBcJ_P0071465 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071466.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36022425 36164512 - MGP_BALBcJ_P0071466 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071467.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36022760 36141322 - MGP_BALBcJ_P0071467 Slc2a9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071468.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36022760 36165886 - MGP_BALBcJ_P0071468 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071469.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36024204 36141295 - MGP_BALBcJ_P0071469 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071470.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36055145 36141346 - MGP_BALBcJ_P0071470 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071471.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36081884 36107595 - Slc2a9 protein_coding processed_transcript MGP_BALBcJ_T0071472.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36107415 36164439 - MGP_BALBcJ_P0071472 Slc2a9 protein_coding protein_coding MGP_BALBcJ_T0071473.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36137242 36164521 - Slc2a9 protein_coding processed_transcript MGP_BALBcJ_T0071474.1 MGP_BALBcJ_G0029489.1 mouse_genomes_project 5 36144199 36154332 - Slc2a9 protein_coding retained_intron MGP_BALBcJ_T0072417.1 MGP_BALBcJ_G0029657.1 mouse_genomes_project 5 85428192 85441175 - MGP_BALBcJ_P0072417 protein_coding protein_coding MGP_BALBcJ_T0014979.1 MGP_BALBcJ_G0013076.1 mouse_genomes_project 5 61874795 61875278 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004629.1 MGP_BALBcJ_G0004010.1 mouse_genomes_project 5 21852001 21869368 - Gm15587 antisense antisense MGP_BALBcJ_T0004630.1 MGP_BALBcJ_G0004010.1 mouse_genomes_project 5 21854996 21869400 - Gm15587 antisense antisense MGP_BALBcJ_T0011592.1 MGP_BALBcJ_G0009717.1 mouse_genomes_project 5 132619799 132620078 + Gm25722 misc_RNA misc_RNA MGP_BALBcJ_T0072895.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101641495 101935967 - MGP_BALBcJ_P0072895 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072896.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101641497 101935967 - MGP_BALBcJ_P0072896 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072897.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101641497 101835701 - MGP_BALBcJ_P0072897 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072898.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101641497 101793911 - MGP_BALBcJ_P0072898 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072899.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101646676 101930562 - MGP_BALBcJ_P0072899 Mapk10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072900.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101653825 101935906 - MGP_BALBcJ_P0072900 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072901.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101723730 101762743 - MGP_BALBcJ_P0072901 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072902.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101724040 101935967 - MGP_BALBcJ_P0072902 Mapk10 protein_coding protein_coding MGP_BALBcJ_T0072903.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101886561 101935917 - Mapk10 protein_coding processed_transcript MGP_BALBcJ_T0072904.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101930455 101933645 - Mapk10 protein_coding processed_transcript MGP_BALBcJ_T0072905.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101930459 101935967 - Mapk10 protein_coding processed_transcript MGP_BALBcJ_T0072906.1 MGP_BALBcJ_G0029775.1 mouse_genomes_project 5 101933583 101935504 - Mapk10 protein_coding processed_transcript MGP_BALBcJ_T0014820.1 MGP_BALBcJ_G0012917.1 mouse_genomes_project 5 358360 358531 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073644.1 MGP_BALBcJ_G0029934.1 mouse_genomes_project 5 114682639 114696559 - MGP_BALBcJ_P0073644 Unc119b protein_coding protein_coding MGP_BALBcJ_T0073645.1 MGP_BALBcJ_G0029934.1 mouse_genomes_project 5 114686531 114689099 - Unc119b protein_coding retained_intron MGP_BALBcJ_T0073646.1 MGP_BALBcJ_G0029934.1 mouse_genomes_project 5 114691208 114696509 - Unc119b protein_coding retained_intron MGP_BALBcJ_T0073054.1 MGP_BALBcJ_G0029814.1 mouse_genomes_project 5 106408283 106479933 + MGP_BALBcJ_P0073054 protein_coding unknown_likely_coding MGP_BALBcJ_T0073055.1 MGP_BALBcJ_G0029814.1 mouse_genomes_project 5 106408317 106462019 + MGP_BALBcJ_P0073055 protein_coding protein_coding MGP_BALBcJ_T0073056.1 MGP_BALBcJ_G0029814.1 mouse_genomes_project 5 106422206 106440730 + protein_coding processed_transcript MGP_BALBcJ_T0074377.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123772673 123804776 + MGP_BALBcJ_P0074377 Hip1r protein_coding protein_coding MGP_BALBcJ_T0074378.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123779483 123789222 + MGP_BALBcJ_P0074378 Hip1r protein_coding protein_coding MGP_BALBcJ_T0074379.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123794053 123796617 + MGP_BALBcJ_P0074379 Hip1r protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074380.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123798627 123800225 + Hip1r protein_coding retained_intron MGP_BALBcJ_T0074381.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123799003 123800880 + MGP_BALBcJ_P0074381 Hip1r protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074382.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123799600 123800906 + Hip1r protein_coding retained_intron MGP_BALBcJ_T0074383.1 MGP_BALBcJ_G0030061.1 mouse_genomes_project 5 123799816 123800892 + Hip1r protein_coding retained_intron MGP_BALBcJ_T0008464.1 MGP_BALBcJ_G0006859.1 mouse_genomes_project 5 151869261 151931427 - D730045B01Rik lincRNA lincRNA MGP_BALBcJ_T0008465.1 MGP_BALBcJ_G0006859.1 mouse_genomes_project 5 151870405 151870714 - D730045B01Rik lincRNA lincRNA MGP_BALBcJ_T0001501.1 MGP_BALBcJ_G0001419.1 mouse_genomes_project 5 31334977 31336132 + TEC TEC MGP_BALBcJ_T0001565.1 MGP_BALBcJ_G0001482.1 mouse_genomes_project 5 46667366 46668194 - TEC TEC MGP_BALBcJ_T0004812.1 MGP_BALBcJ_G0004145.1 mouse_genomes_project 5 124036275 124043691 + Pitpnm2os1 antisense antisense MGP_BALBcJ_T0101202.1 MGP_BALBcJ_G0039238.1 mouse_genomes_project 5 62019430 62019564 + Gm22559 snoRNA snoRNA MGP_BALBcJ_T0071987.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65550748 65776151 - MGP_BALBcJ_P0071987 Atp8a1 protein_coding protein_coding MGP_BALBcJ_T0071988.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65550748 65776087 - MGP_BALBcJ_P0071988 Atp8a1 protein_coding protein_coding MGP_BALBcJ_T0071989.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65551770 65776148 - MGP_BALBcJ_P0071989 Atp8a1 protein_coding protein_coding MGP_BALBcJ_T0071990.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65553183 65776012 - MGP_BALBcJ_P0071990 Atp8a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071991.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65555285 65593530 - Atp8a1 protein_coding processed_transcript MGP_BALBcJ_T0071992.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65615620 65703968 - Atp8a1 protein_coding retained_intron MGP_BALBcJ_T0071993.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65693837 65696363 - Atp8a1 protein_coding retained_intron MGP_BALBcJ_T0071994.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65703376 65744049 - Atp8a1 protein_coding processed_transcript MGP_BALBcJ_T0071995.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65708088 65776148 - MGP_BALBcJ_P0071995 Atp8a1 protein_coding protein_coding MGP_BALBcJ_T0071996.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65708088 65776148 - MGP_BALBcJ_P0071996 Atp8a1 protein_coding protein_coding MGP_BALBcJ_T0071997.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65713649 65776146 - Atp8a1 protein_coding retained_intron MGP_BALBcJ_T0071998.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65734252 65737613 - Atp8a1 protein_coding retained_intron MGP_BALBcJ_T0071999.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65740986 65744058 - Atp8a1 protein_coding retained_intron MGP_BALBcJ_T0072000.1 MGP_BALBcJ_G0029574.1 mouse_genomes_project 5 65740990 65744673 - MGP_BALBcJ_P0072000 Atp8a1 protein_coding protein_coding MGP_BALBcJ_T0014991.1 MGP_BALBcJ_G0013088.1 mouse_genomes_project 5 65389007 65389299 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074505.1 MGP_BALBcJ_G0030080.1 mouse_genomes_project 5 124479189 124589990 + MGP_BALBcJ_P0074505 Dnah10 protein_coding protein_coding MGP_BALBcJ_T0074506.1 MGP_BALBcJ_G0030080.1 mouse_genomes_project 5 124479189 124589995 + MGP_BALBcJ_P0074506 Dnah10 protein_coding protein_coding MGP_BALBcJ_T0074507.1 MGP_BALBcJ_G0030080.1 mouse_genomes_project 5 124542475 124542906 + Dnah10 protein_coding processed_transcript MGP_BALBcJ_T0074508.1 MGP_BALBcJ_G0030080.1 mouse_genomes_project 5 124547295 124551797 + Dnah10 protein_coding processed_transcript MGP_BALBcJ_T0074509.1 MGP_BALBcJ_G0030080.1 mouse_genomes_project 5 124556925 124560149 + Dnah10 protein_coding retained_intron MGP_BALBcJ_T0074510.1 MGP_BALBcJ_G0030080.1 mouse_genomes_project 5 124560800 124589812 + Dnah10 protein_coding retained_intron MGP_BALBcJ_T0073461.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113262064 113267616 + MGP_BALBcJ_P0073461 Iscu protein_coding protein_coding MGP_BALBcJ_T0073462.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113262119 113267601 + MGP_BALBcJ_P0073462 Iscu protein_coding protein_coding MGP_BALBcJ_T0073463.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113262119 113267126 + MGP_BALBcJ_P0073463 Iscu protein_coding protein_coding MGP_BALBcJ_T0073464.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113262134 113266367 + MGP_BALBcJ_P0073464 Iscu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073465.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113262321 113267342 + MGP_BALBcJ_P0073465 Iscu protein_coding protein_coding MGP_BALBcJ_T0073466.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113262341 113267273 + MGP_BALBcJ_P0073466 Iscu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073467.1 MGP_BALBcJ_G0029899.1 mouse_genomes_project 5 113263163 113267169 + MGP_BALBcJ_P0073467 Iscu protein_coding protein_coding MGP_BALBcJ_T0001831.1 MGP_BALBcJ_G0001745.1 mouse_genomes_project 5 128320407 128321819 + TEC TEC MGP_BALBcJ_T0001663.1 MGP_BALBcJ_G0001579.1 mouse_genomes_project 5 65684605 65686338 - TEC TEC MGP_BALBcJ_T0008311.1 MGP_BALBcJ_G0006752.1 mouse_genomes_project 5 118018750 118019273 - Gm28563 lincRNA lincRNA MGP_BALBcJ_T0001744.1 MGP_BALBcJ_G0001659.1 mouse_genomes_project 5 106656068 106657065 + TEC TEC MGP_BALBcJ_T0075877.1 MGP_BALBcJ_G0030351.1 mouse_genomes_project 5 145506778 145518731 + MGP_BALBcJ_P0075877 protein_coding unknown_likely_coding MGP_BALBcJ_T0075878.1 MGP_BALBcJ_G0030351.1 mouse_genomes_project 5 145506792 145512758 + MGP_BALBcJ_P0075878 protein_coding protein_coding MGP_BALBcJ_T0015180.1 MGP_BALBcJ_G0013277.1 mouse_genomes_project 5 146298163 146298972 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001603.1 MGP_BALBcJ_G0001520.1 mouse_genomes_project 5 55569522 55571700 + TEC TEC MGP_BALBcJ_T0001675.1 MGP_BALBcJ_G0001591.1 mouse_genomes_project 5 67234270 67238631 - TEC TEC MGP_BALBcJ_T0015134.1 MGP_BALBcJ_G0013231.1 mouse_genomes_project 5 133345926 133346892 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010714.1 MGP_BALBcJ_G0008839.1 mouse_genomes_project 5 138139719 138139801 - Mir106b miRNA miRNA MGP_BALBcJ_T0011588.1 MGP_BALBcJ_G0009713.1 mouse_genomes_project 5 111678783 111678933 - Gm27627 misc_RNA misc_RNA MGP_BALBcJ_T0004819.1 MGP_BALBcJ_G0004151.1 mouse_genomes_project 5 127042923 127061712 - Tmem132cos antisense antisense MGP_BALBcJ_T0004820.1 MGP_BALBcJ_G0004151.1 mouse_genomes_project 5 127042939 127061672 - Tmem132cos antisense antisense MGP_BALBcJ_T0004821.1 MGP_BALBcJ_G0004151.1 mouse_genomes_project 5 127043001 127061675 - Tmem132cos antisense antisense MGP_BALBcJ_T0001860.1 MGP_BALBcJ_G0001774.1 mouse_genomes_project 5 132019170 132020806 - TEC TEC MGP_BALBcJ_T0015062.1 MGP_BALBcJ_G0013159.1 mouse_genomes_project 5 99319877 99320230 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001620.1 MGP_BALBcJ_G0001537.1 mouse_genomes_project 5 61525917 61530642 - TEC TEC MGP_BALBcJ_T0001621.1 MGP_BALBcJ_G0001537.1 mouse_genomes_project 5 61529697 61530012 - TEC TEC MGP_BALBcJ_T0001789.1 MGP_BALBcJ_G0001704.1 mouse_genomes_project 5 118623387 118625822 - TEC TEC MGP_BALBcJ_T0001747.1 MGP_BALBcJ_G0001662.1 mouse_genomes_project 5 107314005 107315381 - TEC TEC MGP_BALBcJ_T0010648.1 MGP_BALBcJ_G0008773.1 mouse_genomes_project 5 20706128 20706174 - Gm28022 miRNA miRNA MGP_BALBcJ_T0001468.1 MGP_BALBcJ_G0001389.1 mouse_genomes_project 5 19337182 19339075 - TEC TEC MGP_BALBcJ_T0015034.1 MGP_BALBcJ_G0013131.1 mouse_genomes_project 5 85987330 85987435 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074971.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135537738 135551586 + MGP_BALBcJ_P0074971 Rhbdd2 protein_coding protein_coding MGP_BALBcJ_T0074972.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135537774 135551658 + MGP_BALBcJ_P0074972 Rhbdd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074973.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135537824 135542837 + Rhbdd2 protein_coding processed_transcript MGP_BALBcJ_T0074974.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135537836 135540770 + Rhbdd2 protein_coding retained_intron MGP_BALBcJ_T0074975.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135537843 135541700 + Rhbdd2 protein_coding retained_intron MGP_BALBcJ_T0074976.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135540256 135545512 + MGP_BALBcJ_P0074976 Rhbdd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074977.1 MGP_BALBcJ_G0030164.1 mouse_genomes_project 5 135541686 135549736 + Rhbdd2 protein_coding retained_intron MGP_BALBcJ_T0073041.1 MGP_BALBcJ_G0029810.1 mouse_genomes_project 5 106078261 106259837 - MGP_BALBcJ_P0073041 Tgfbr3 protein_coding protein_coding MGP_BALBcJ_T0073042.1 MGP_BALBcJ_G0029810.1 mouse_genomes_project 5 106080971 106163900 - Tgfbr3 protein_coding processed_transcript MGP_BALBcJ_T0073043.1 MGP_BALBcJ_G0029810.1 mouse_genomes_project 5 106090011 106104620 - MGP_BALBcJ_P0073043 Tgfbr3 protein_coding protein_coding MGP_BALBcJ_T0073044.1 MGP_BALBcJ_G0029810.1 mouse_genomes_project 5 106119599 106259803 - Tgfbr3 protein_coding retained_intron MGP_BALBcJ_T0014951.1 MGP_BALBcJ_G0013048.1 mouse_genomes_project 5 51791461 51792539 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073259.1 MGP_BALBcJ_G0029859.1 mouse_genomes_project 5 109707297 109716476 - MGP_BALBcJ_P0073259 Pgam5 protein_coding protein_coding MGP_BALBcJ_T0073260.1 MGP_BALBcJ_G0029859.1 mouse_genomes_project 5 109707323 109716450 - MGP_BALBcJ_P0073260 Pgam5 protein_coding protein_coding MGP_BALBcJ_T0073261.1 MGP_BALBcJ_G0029859.1 mouse_genomes_project 5 109711765 109712564 - Pgam5 protein_coding retained_intron MGP_BALBcJ_T0073262.1 MGP_BALBcJ_G0029859.1 mouse_genomes_project 5 109712110 109716417 - MGP_BALBcJ_P0073262 Pgam5 protein_coding protein_coding MGP_BALBcJ_T0001651.1 MGP_BALBcJ_G0001567.1 mouse_genomes_project 5 64385869 64386495 - TEC TEC MGP_BALBcJ_T0073361.1 MGP_BALBcJ_G0029878.1 mouse_genomes_project 5 111717142 111730885 + MGP_BALBcJ_P0073361 Crybb1 protein_coding protein_coding MGP_BALBcJ_T0073362.1 MGP_BALBcJ_G0029878.1 mouse_genomes_project 5 111717172 111730757 + MGP_BALBcJ_P0073362 Crybb1 protein_coding protein_coding MGP_BALBcJ_T0073363.1 MGP_BALBcJ_G0029878.1 mouse_genomes_project 5 111717201 111730802 + MGP_BALBcJ_P0073363 Crybb1 protein_coding protein_coding MGP_BALBcJ_T0011595.1 MGP_BALBcJ_G0009720.1 mouse_genomes_project 5 139960826 139961147 + Gm24146 misc_RNA misc_RNA MGP_BALBcJ_T0071335.1 MGP_BALBcJ_G0029467.1 mouse_genomes_project 5 34187641 34191228 + MGP_BALBcJ_P0071335 Ccdc96 protein_coding protein_coding MGP_BALBcJ_T0075257.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137562493 137581225 + MGP_BALBcJ_P0075257 protein_coding protein_coding MGP_BALBcJ_T0075258.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137562515 137574150 + protein_coding retained_intron MGP_BALBcJ_T0075259.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137562524 137574965 + MGP_BALBcJ_P0075259 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075261.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137562550 137581230 + MGP_BALBcJ_P0075261 protein_coding protein_coding MGP_BALBcJ_T0075262.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137562550 137567260 + MGP_BALBcJ_P0075262 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075263.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137563502 137580311 + MGP_BALBcJ_P0075263 protein_coding protein_coding MGP_BALBcJ_T0075264.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137575670 137579494 + MGP_BALBcJ_P0075264 protein_coding protein_coding MGP_BALBcJ_T0075265.1 MGP_BALBcJ_G0030214.1 mouse_genomes_project 5 137579496 137580370 + MGP_BALBcJ_P0075265 protein_coding protein_coding MGP_BALBcJ_T0073895.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120171471 120194572 + MGP_BALBcJ_P0073895 Slc8b1 protein_coding protein_coding MGP_BALBcJ_T0073896.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120171538 120194567 + MGP_BALBcJ_P0073896 Slc8b1 protein_coding protein_coding MGP_BALBcJ_T0073897.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120171555 120194568 + MGP_BALBcJ_P0073897 Slc8b1 protein_coding protein_coding MGP_BALBcJ_T0073898.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120171573 120173492 + MGP_BALBcJ_P0073898 Slc8b1 protein_coding protein_coding MGP_BALBcJ_T0073899.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120173171 120180043 + MGP_BALBcJ_P0073899 Slc8b1 protein_coding protein_coding MGP_BALBcJ_T0073900.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120173446 120193605 + MGP_BALBcJ_P0073900 Slc8b1 protein_coding protein_coding MGP_BALBcJ_T0073901.1 MGP_BALBcJ_G0029980.1 mouse_genomes_project 5 120181070 120182512 + Slc8b1 protein_coding retained_intron MGP_BALBcJ_T0004779.1 MGP_BALBcJ_G0004124.1 mouse_genomes_project 5 117549936 117553720 - Gm26995 antisense antisense MGP_BALBcJ_T0071853.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63449760 63510162 + MGP_BALBcJ_P0071853 Ube2k protein_coding protein_coding MGP_BALBcJ_T0071854.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63449781 63509356 + MGP_BALBcJ_P0071854 Ube2k protein_coding protein_coding MGP_BALBcJ_T0071855.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63449790 63510162 + MGP_BALBcJ_P0071855 Ube2k protein_coding protein_coding MGP_BALBcJ_T0071856.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63449833 63509552 + MGP_BALBcJ_P0071856 Ube2k protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071857.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63449983 63510435 + MGP_BALBcJ_P0071857 Ube2k protein_coding protein_coding MGP_BALBcJ_T0071858.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63482785 63485452 + Ube2k protein_coding retained_intron MGP_BALBcJ_T0071859.1 MGP_BALBcJ_G0029558.1 mouse_genomes_project 5 63506002 63509552 + Ube2k protein_coding retained_intron MGP_BALBcJ_T0074254.1 MGP_BALBcJ_G0030041.1 mouse_genomes_project 5 122910005 122917702 + protein_coding retained_intron MGP_BALBcJ_T0074255.1 MGP_BALBcJ_G0030041.1 mouse_genomes_project 5 122910005 122936614 + MGP_BALBcJ_P0074255 protein_coding protein_coding MGP_BALBcJ_T0074256.1 MGP_BALBcJ_G0030041.1 mouse_genomes_project 5 122910005 122935408 + MGP_BALBcJ_P0074256 protein_coding protein_coding MGP_BALBcJ_T0074257.1 MGP_BALBcJ_G0030041.1 mouse_genomes_project 5 122910679 122935408 + MGP_BALBcJ_P0074257 protein_coding protein_coding MGP_BALBcJ_T0074258.1 MGP_BALBcJ_G0030041.1 mouse_genomes_project 5 122930262 122932567 + protein_coding retained_intron MGP_BALBcJ_T0074259.1 MGP_BALBcJ_G0030041.1 mouse_genomes_project 5 122930934 122931661 + MGP_BALBcJ_P0074259 protein_coding protein_coding MGP_BALBcJ_T0070254.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 16597520 18077033 + MGP_BALBcJ_P0070254 Magi2 protein_coding protein_coding MGP_BALBcJ_T0070255.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 16597530 17153729 + Magi2 protein_coding processed_transcript MGP_BALBcJ_T0070256.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 16597535 18077017 + MGP_BALBcJ_P0070256 Magi2 protein_coding protein_coding MGP_BALBcJ_T0070257.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 16597539 18078887 + MGP_BALBcJ_P0070257 Magi2 protein_coding protein_coding MGP_BALBcJ_T0070258.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 16597881 16601006 + Magi2 protein_coding retained_intron MGP_BALBcJ_T0070259.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 17296977 17571250 + MGP_BALBcJ_P0070259 Magi2 protein_coding protein_coding MGP_BALBcJ_T0070260.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 17445758 18076240 + MGP_BALBcJ_P0070260 Magi2 protein_coding protein_coding MGP_BALBcJ_T0070261.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 17578733 17833280 + Magi2 protein_coding processed_transcript MGP_BALBcJ_T0070262.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 17603418 18020200 + Magi2 protein_coding retained_intron MGP_BALBcJ_T0070263.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 17902474 17970587 + Magi2 protein_coding processed_transcript MGP_BALBcJ_T0070264.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 17972273 18076467 + MGP_BALBcJ_P0070264 Magi2 protein_coding protein_coding MGP_BALBcJ_T0070265.1 MGP_BALBcJ_G0029286.1 mouse_genomes_project 5 18075782 18076917 + Magi2 protein_coding processed_transcript MGP_BALBcJ_T0074968.1 MGP_BALBcJ_G0030162.1 mouse_genomes_project 5 135452675 135455901 - MGP_BALBcJ_P0074968 Ccl26 protein_coding protein_coding MGP_BALBcJ_T0072797.1 MGP_BALBcJ_G0029757.1 mouse_genomes_project 5 98683316 98683919 + MGP_BALBcJ_P0072797 4930524J08Rik protein_coding protein_coding MGP_BALBcJ_T0072535.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88581124 88721289 - MGP_BALBcJ_P0072535 Ankrd17 protein_coding protein_coding MGP_BALBcJ_T0072536.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88581777 88586422 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072537.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88582255 88721276 - MGP_BALBcJ_P0072537 Ankrd17 protein_coding protein_coding MGP_BALBcJ_T0072538.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88582423 88720935 - MGP_BALBcJ_P0072538 Ankrd17 protein_coding protein_coding MGP_BALBcJ_T0072539.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88582699 88694024 - MGP_BALBcJ_P0072539 Ankrd17 protein_coding protein_coding MGP_BALBcJ_T0072540.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88590379 88593654 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072541.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88607503 88658632 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072542.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88608147 88617248 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072543.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88613931 88620459 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072544.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88620993 88629279 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072545.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88630135 88632312 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072546.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88646038 88648880 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0072547.1 MGP_BALBcJ_G0029695.1 mouse_genomes_project 5 88718800 88720892 - Ankrd17 protein_coding retained_intron MGP_BALBcJ_T0014946.1 MGP_BALBcJ_G0013043.1 mouse_genomes_project 5 47552890 47555187 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074886.1 MGP_BALBcJ_G0030146.1 mouse_genomes_project 5 134864348 134865607 + MGP_BALBcJ_P0074886 Cldn3 protein_coding protein_coding MGP_BALBcJ_T0099984.1 MGP_BALBcJ_G0038020.1 mouse_genomes_project 5 152174859 152174966 - Gm24242 snRNA snRNA MGP_BALBcJ_T0015137.1 MGP_BALBcJ_G0013234.1 mouse_genomes_project 5 134885574 134885746 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001704.1 MGP_BALBcJ_G0001619.1 mouse_genomes_project 5 79942195 79943203 + TEC TEC MGP_BALBcJ_T0008107.1 MGP_BALBcJ_G0006605.1 mouse_genomes_project 5 47802840 47807484 + 4930448I18Rik lincRNA lincRNA MGP_BALBcJ_T0074762.1 MGP_BALBcJ_G0030130.1 mouse_genomes_project 5 133978058 134009670 - MGP_BALBcJ_P0074762 Wbscr16 protein_coding protein_coding MGP_BALBcJ_T0074763.1 MGP_BALBcJ_G0030130.1 mouse_genomes_project 5 133985894 134001428 - Wbscr16 protein_coding retained_intron MGP_BALBcJ_T0074764.1 MGP_BALBcJ_G0030130.1 mouse_genomes_project 5 133995590 133998999 - Wbscr16 protein_coding retained_intron MGP_BALBcJ_T0071559.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41811642 41863020 - MGP_BALBcJ_P0071559 Tapt1 protein_coding protein_coding MGP_BALBcJ_T0071560.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41811647 41863015 - MGP_BALBcJ_P0071560 Tapt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071561.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41812984 41819305 - Tapt1 protein_coding retained_intron MGP_BALBcJ_T0071562.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41820711 41828575 - Tapt1 protein_coding retained_intron MGP_BALBcJ_T0071563.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41825160 41854610 - MGP_BALBcJ_P0071563 Tapt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071564.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41825175 41840741 - Tapt1 protein_coding retained_intron MGP_BALBcJ_T0071565.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41828873 41840911 - Tapt1 protein_coding retained_intron MGP_BALBcJ_T0071566.1 MGP_BALBcJ_G0029506.1 mouse_genomes_project 5 41854226 41863024 - Tapt1 protein_coding retained_intron MGP_BALBcJ_T0001740.1 MGP_BALBcJ_G0001655.1 mouse_genomes_project 5 104834905 104837167 + TEC TEC MGP_BALBcJ_T0018173.1 MGP_BALBcJ_G0015557.1 mouse_genomes_project 5 149814522 149877489 + Gm20488 processed_transcript processed_transcript MGP_BALBcJ_T0075260.1 MGP_BALBcJ_G0030215.1 mouse_genomes_project 5 137562547 137583029 + MGP_BALBcJ_P0075260 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073841.1 MGP_BALBcJ_G0029967.1 mouse_genomes_project 5 117644318 117679717 + MGP_BALBcJ_P0073841 Tesc protein_coding protein_coding MGP_BALBcJ_T0073842.1 MGP_BALBcJ_G0029967.1 mouse_genomes_project 5 117644340 117679684 + MGP_BALBcJ_P0073842 Tesc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073843.1 MGP_BALBcJ_G0029967.1 mouse_genomes_project 5 117644445 117679709 + Tesc protein_coding retained_intron MGP_BALBcJ_T0073844.1 MGP_BALBcJ_G0029967.1 mouse_genomes_project 5 117653837 117679612 + Tesc protein_coding processed_transcript MGP_BALBcJ_T0073845.1 MGP_BALBcJ_G0029967.1 mouse_genomes_project 5 117659284 117671476 + Tesc protein_coding processed_transcript MGP_BALBcJ_T0073846.1 MGP_BALBcJ_G0029967.1 mouse_genomes_project 5 117659285 117664292 + Tesc protein_coding processed_transcript MGP_BALBcJ_T0070239.1 MGP_BALBcJ_G0029280.1 mouse_genomes_project 5 14835108 14837706 + MGP_BALBcJ_P0070239 protein_coding protein_coding MGP_BALBcJ_T0014931.1 MGP_BALBcJ_G0013028.1 mouse_genomes_project 5 39024938 39025747 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098610.1 MGP_BALBcJ_G0036664.1 mouse_genomes_project 5 51021712 51021826 - n-R5s172 rRNA rRNA MGP_BALBcJ_T0074005.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255444 121275801 - MGP_BALBcJ_P0074005 Mapkapk5 protein_coding protein_coding MGP_BALBcJ_T0074006.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255454 121275096 - MGP_BALBcJ_P0074006 Mapkapk5 protein_coding protein_coding MGP_BALBcJ_T0074007.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255458 121257636 - Mapkapk5 protein_coding retained_intron MGP_BALBcJ_T0074008.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255458 121256215 - Mapkapk5 protein_coding retained_intron MGP_BALBcJ_T0074009.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255458 121257569 - MGP_BALBcJ_P0074009 Mapkapk5 protein_coding protein_coding MGP_BALBcJ_T0074010.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255462 121267626 - Mapkapk5 protein_coding processed_transcript MGP_BALBcJ_T0074011.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255551 121275096 - MGP_BALBcJ_P0074011 Mapkapk5 protein_coding protein_coding MGP_BALBcJ_T0074012.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121255551 121275096 - MGP_BALBcJ_P0074012 Mapkapk5 protein_coding protein_coding MGP_BALBcJ_T0074013.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121256140 121275096 - Mapkapk5 protein_coding processed_transcript MGP_BALBcJ_T0074014.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121256936 121261519 - Mapkapk5 protein_coding retained_intron MGP_BALBcJ_T0074015.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121263060 121265756 - MGP_BALBcJ_P0074015 Mapkapk5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074016.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121263255 121275127 - MGP_BALBcJ_P0074016 Mapkapk5 protein_coding protein_coding MGP_BALBcJ_T0074017.1 MGP_BALBcJ_G0030008.1 mouse_genomes_project 5 121264344 121267089 - Mapkapk5 protein_coding processed_transcript MGP_BALBcJ_T0073440.1 MGP_BALBcJ_G0029894.1 mouse_genomes_project 5 112980673 112983482 + Wscd2 protein_coding retained_intron MGP_BALBcJ_T0073441.1 MGP_BALBcJ_G0029894.1 mouse_genomes_project 5 112980787 113070431 + MGP_BALBcJ_P0073441 Wscd2 protein_coding protein_coding MGP_BALBcJ_T0073442.1 MGP_BALBcJ_G0029894.1 mouse_genomes_project 5 112981092 113035346 + Wscd2 protein_coding retained_intron MGP_BALBcJ_T0073443.1 MGP_BALBcJ_G0029894.1 mouse_genomes_project 5 113030746 113037271 + Wscd2 protein_coding retained_intron MGP_BALBcJ_T0073444.1 MGP_BALBcJ_G0029894.1 mouse_genomes_project 5 113051680 113070424 + Wscd2 protein_coding processed_transcript MGP_BALBcJ_T0073445.1 MGP_BALBcJ_G0029894.1 mouse_genomes_project 5 113059528 113062614 + Wscd2 protein_coding processed_transcript MGP_BALBcJ_T0008361.1 MGP_BALBcJ_G0006784.1 mouse_genomes_project 5 126584010 126601910 - Gm42953 lincRNA lincRNA MGP_BALBcJ_T0070957.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29301756 29335058 + MGP_BALBcJ_P0070957 Bre protein_coding protein_coding MGP_BALBcJ_T0070958.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29301976 29335478 + Bre protein_coding retained_intron MGP_BALBcJ_T0070959.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29301991 29684891 + MGP_BALBcJ_P0070959 Bre protein_coding protein_coding MGP_BALBcJ_T0070960.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302002 29311795 + Bre protein_coding processed_transcript MGP_BALBcJ_T0070961.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302012 29602460 + Bre protein_coding retained_intron MGP_BALBcJ_T0070962.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302020 29436948 + Bre protein_coding retained_intron MGP_BALBcJ_T0070963.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302036 29684784 + MGP_BALBcJ_P0070963 Bre protein_coding protein_coding MGP_BALBcJ_T0070964.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302056 29684676 + MGP_BALBcJ_P0070964 Bre protein_coding protein_coding MGP_BALBcJ_T0070965.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302056 29684676 + MGP_BALBcJ_P0070965 Bre protein_coding protein_coding MGP_BALBcJ_T0070966.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302056 29684676 + MGP_BALBcJ_P0070966 Bre protein_coding protein_coding MGP_BALBcJ_T0070967.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29302057 29426749 + MGP_BALBcJ_P0070967 Bre protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070968.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29305852 29657716 + MGP_BALBcJ_P0070968 Bre protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070969.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29391197 29426830 + Bre protein_coding processed_transcript MGP_BALBcJ_T0070970.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29646134 29684690 + Bre protein_coding processed_transcript MGP_BALBcJ_T0070971.1 MGP_BALBcJ_G0029409.1 mouse_genomes_project 5 29679658 29684683 + Bre protein_coding processed_transcript MGP_BALBcJ_T0001750.1 MGP_BALBcJ_G0001665.1 mouse_genomes_project 5 110443415 110443967 + TEC TEC MGP_BALBcJ_T0099901.1 MGP_BALBcJ_G0037937.1 mouse_genomes_project 5 6188790 6188957 + Gm24666 snRNA snRNA MGP_BALBcJ_T0072629.1 MGP_BALBcJ_G0029722.1 mouse_genomes_project 5 90606062 90626679 - MGP_BALBcJ_P0072629 Naaa protein_coding protein_coding MGP_BALBcJ_T0072630.1 MGP_BALBcJ_G0029722.1 mouse_genomes_project 5 90606067 90611423 - Naaa protein_coding retained_intron MGP_BALBcJ_T0072631.1 MGP_BALBcJ_G0029722.1 mouse_genomes_project 5 90607124 90626674 - MGP_BALBcJ_P0072631 Naaa protein_coding protein_coding MGP_BALBcJ_T0072632.1 MGP_BALBcJ_G0029722.1 mouse_genomes_project 5 90608235 90621211 - MGP_BALBcJ_P0072632 Naaa protein_coding protein_coding MGP_BALBcJ_T0072633.1 MGP_BALBcJ_G0029722.1 mouse_genomes_project 5 90624325 90626674 - Naaa protein_coding retained_intron MGP_BALBcJ_T0070233.1 MGP_BALBcJ_G0029279.1 mouse_genomes_project 5 13922639 13942533 + Hgf protein_coding retained_intron MGP_BALBcJ_T0070234.1 MGP_BALBcJ_G0029279.1 mouse_genomes_project 5 13922684 13988748 + MGP_BALBcJ_P0070234 Hgf protein_coding unknown_likely_coding MGP_BALBcJ_T0070235.1 MGP_BALBcJ_G0029279.1 mouse_genomes_project 5 13922721 13988930 + MGP_BALBcJ_P0070235 Hgf protein_coding unknown_likely_coding MGP_BALBcJ_T0070236.1 MGP_BALBcJ_G0029279.1 mouse_genomes_project 5 13922723 13938106 + Hgf protein_coding retained_intron MGP_BALBcJ_T0070237.1 MGP_BALBcJ_G0029279.1 mouse_genomes_project 5 13922894 13938679 + Hgf protein_coding retained_intron MGP_BALBcJ_T0070238.1 MGP_BALBcJ_G0029279.1 mouse_genomes_project 5 13923071 13988765 + MGP_BALBcJ_P0070238 Hgf protein_coding protein_coding MGP_BALBcJ_T0008118.1 MGP_BALBcJ_G0006616.1 mouse_genomes_project 5 56249923 56252962 + 1700029E06Rik lincRNA lincRNA MGP_BALBcJ_T0074194.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546628 122581273 - MGP_BALBcJ_P0074194 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074195.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546890 122581221 - MGP_BALBcJ_P0074195 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074196.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546890 122581221 - MGP_BALBcJ_P0074196 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074197.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546890 122581214 - MGP_BALBcJ_P0074197 Anapc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074198.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546892 122581214 - MGP_BALBcJ_P0074198 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074199.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546896 122581214 - MGP_BALBcJ_P0074199 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074200.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122546900 122581228 - MGP_BALBcJ_P0074200 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074201.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122547084 122552669 - MGP_BALBcJ_P0074201 Anapc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074202.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122547585 122559190 - Anapc5 protein_coding retained_intron MGP_BALBcJ_T0074203.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122551026 122553629 - MGP_BALBcJ_P0074203 Anapc5 protein_coding protein_coding MGP_BALBcJ_T0074204.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122552590 122561917 - Anapc5 protein_coding retained_intron MGP_BALBcJ_T0074205.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122558854 122566803 - MGP_BALBcJ_P0074205 Anapc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074206.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122558929 122578517 - Anapc5 protein_coding processed_transcript MGP_BALBcJ_T0074207.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122559554 122565800 - Anapc5 protein_coding retained_intron MGP_BALBcJ_T0074208.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122559739 122581213 - Anapc5 protein_coding retained_intron MGP_BALBcJ_T0074209.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122565293 122580952 - Anapc5 protein_coding retained_intron MGP_BALBcJ_T0074210.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122566788 122581204 - MGP_BALBcJ_P0074210 Anapc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074211.1 MGP_BALBcJ_G0030034.1 mouse_genomes_project 5 122577790 122581209 - Anapc5 protein_coding processed_transcript MGP_BALBcJ_T0010693.1 MGP_BALBcJ_G0008818.1 mouse_genomes_project 5 120519736 120519862 - Gm22907 miRNA miRNA MGP_BALBcJ_T0008401.1 MGP_BALBcJ_G0006811.1 mouse_genomes_project 5 138216670 138217135 + Gm43645 lincRNA lincRNA MGP_BALBcJ_T0008463.1 MGP_BALBcJ_G0006858.1 mouse_genomes_project 5 151762292 151769258 + Gm42904 lincRNA lincRNA MGP_BALBcJ_T0014845.1 MGP_BALBcJ_G0012942.1 mouse_genomes_project 5 13229194 13229603 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073851.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117810493 117864540 - MGP_BALBcJ_P0073851 Rnft2 protein_coding protein_coding MGP_BALBcJ_T0073852.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117810499 117864795 - MGP_BALBcJ_P0073852 Rnft2 protein_coding protein_coding MGP_BALBcJ_T0073853.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117813388 117848945 - Rnft2 protein_coding retained_intron MGP_BALBcJ_T0073854.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117813870 117821041 - MGP_BALBcJ_P0073854 Rnft2 protein_coding protein_coding MGP_BALBcJ_T0073855.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117853827 117864673 - MGP_BALBcJ_P0073855 Rnft2 protein_coding protein_coding MGP_BALBcJ_T0073856.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117856598 117862592 - Rnft2 protein_coding retained_intron MGP_BALBcJ_T0073857.1 MGP_BALBcJ_G0029970.1 mouse_genomes_project 5 117857176 117864671 - MGP_BALBcJ_P0073857 Rnft2 protein_coding protein_coding MGP_BALBcJ_T0015182.1 MGP_BALBcJ_G0013279.1 mouse_genomes_project 5 146557693 146558167 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075882.1 MGP_BALBcJ_G0030354.1 mouse_genomes_project 5 146220767 146294309 - MGP_BALBcJ_P0075882 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075883.1 MGP_BALBcJ_G0030354.1 mouse_genomes_project 5 146220769 146294309 - MGP_BALBcJ_P0075883 protein_coding protein_coding MGP_BALBcJ_T0008173.1 MGP_BALBcJ_G0006658.1 mouse_genomes_project 5 84947215 84964026 - Gm43057 lincRNA lincRNA MGP_BALBcJ_T0074237.1 MGP_BALBcJ_G0030038.1 mouse_genomes_project 5 122803030 122814091 - MGP_BALBcJ_P0074237 Morn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074238.1 MGP_BALBcJ_G0030038.1 mouse_genomes_project 5 122803050 122804971 - MGP_BALBcJ_P0074238 Morn3 protein_coding protein_coding MGP_BALBcJ_T0074239.1 MGP_BALBcJ_G0030038.1 mouse_genomes_project 5 122803123 122804979 - MGP_BALBcJ_P0074239 Morn3 protein_coding protein_coding MGP_BALBcJ_T0074240.1 MGP_BALBcJ_G0030038.1 mouse_genomes_project 5 122804549 122813850 - MGP_BALBcJ_P0074240 Morn3 protein_coding protein_coding MGP_BALBcJ_T0074241.1 MGP_BALBcJ_G0030038.1 mouse_genomes_project 5 122804571 122814080 - MGP_BALBcJ_P0074241 Morn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001749.1 MGP_BALBcJ_G0001664.1 mouse_genomes_project 5 107604011 107606121 - TEC TEC MGP_BALBcJ_T0008233.1 MGP_BALBcJ_G0006704.1 mouse_genomes_project 5 105321489 105323315 + Gm42916 lincRNA lincRNA MGP_BALBcJ_T0102593.1 MGP_BALBcJ_G0040409.1 mouse_genomes_project 5 152126835 152132646 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008185.1 MGP_BALBcJ_G0006670.1 mouse_genomes_project 5 95533609 95545461 + Gm42601 lincRNA lincRNA MGP_BALBcJ_T0014862.1 MGP_BALBcJ_G0012959.1 mouse_genomes_project 5 18975567 18976375 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071769.1 MGP_BALBcJ_G0029542.1 mouse_genomes_project 5 61974046 62003363 + MGP_BALBcJ_P0071769 Pgm1 protein_coding protein_coding MGP_BALBcJ_T0071770.1 MGP_BALBcJ_G0029542.1 mouse_genomes_project 5 61984957 61992026 + MGP_BALBcJ_P0071770 Pgm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071771.1 MGP_BALBcJ_G0029542.1 mouse_genomes_project 5 61987863 61989740 + Pgm1 protein_coding retained_intron MGP_BALBcJ_T0071772.1 MGP_BALBcJ_G0029542.1 mouse_genomes_project 5 61993512 62003176 + MGP_BALBcJ_P0071772 Pgm1 protein_coding protein_coding MGP_BALBcJ_T0072675.1 MGP_BALBcJ_G0029728.1 mouse_genomes_project 5 90795072 90854559 - MGP_BALBcJ_P0072675 Scarb2 protein_coding protein_coding MGP_BALBcJ_T0072676.1 MGP_BALBcJ_G0029728.1 mouse_genomes_project 5 90853722 90855755 - Scarb2 protein_coding retained_intron MGP_BALBcJ_T0001553.1 MGP_BALBcJ_G0001471.1 mouse_genomes_project 5 45961465 45963223 + TEC TEC MGP_BALBcJ_T0073446.1 MGP_BALBcJ_G0029895.1 mouse_genomes_project 5 113092855 113130885 - MGP_BALBcJ_P0073446 Cmklr1 protein_coding protein_coding MGP_BALBcJ_T0073447.1 MGP_BALBcJ_G0029895.1 mouse_genomes_project 5 113094507 113108072 - MGP_BALBcJ_P0073447 Cmklr1 protein_coding protein_coding MGP_BALBcJ_T0073448.1 MGP_BALBcJ_G0029895.1 mouse_genomes_project 5 113095398 113124059 - MGP_BALBcJ_P0073448 Cmklr1 protein_coding protein_coding MGP_BALBcJ_T0073449.1 MGP_BALBcJ_G0029895.1 mouse_genomes_project 5 113111762 113130855 - Cmklr1 protein_coding processed_transcript MGP_BALBcJ_T0014926.1 MGP_BALBcJ_G0013023.1 mouse_genomes_project 5 35086886 35087366 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075934.1 MGP_BALBcJ_G0030367.1 mouse_genomes_project 5 147568790 147571038 + MGP_BALBcJ_P0075934 Gsx1 protein_coding protein_coding MGP_BALBcJ_T0071277.1 MGP_BALBcJ_G0029456.1 mouse_genomes_project 5 33205489 33228787 - MGP_BALBcJ_P0071277 Cpz protein_coding protein_coding MGP_BALBcJ_T0071278.1 MGP_BALBcJ_G0029456.1 mouse_genomes_project 5 33220714 33228663 - MGP_BALBcJ_P0071278 Cpz protein_coding protein_coding MGP_BALBcJ_T0004851.1 MGP_BALBcJ_G0004174.1 mouse_genomes_project 5 139315306 139316194 - 4930520M14Rik antisense antisense MGP_BALBcJ_T0008060.1 MGP_BALBcJ_G0006574.1 mouse_genomes_project 5 29173821 29175624 - AI839979 lincRNA lincRNA MGP_BALBcJ_T0008061.1 MGP_BALBcJ_G0006574.1 mouse_genomes_project 5 29174331 29175618 - AI839979 lincRNA lincRNA MGP_BALBcJ_T0008040.1 MGP_BALBcJ_G0006560.1 mouse_genomes_project 5 21933813 21934395 + 2310074N15Rik lincRNA lincRNA MGP_BALBcJ_T0001555.1 MGP_BALBcJ_G0001473.1 mouse_genomes_project 5 46203105 46206008 - TEC TEC MGP_BALBcJ_T0014830.1 MGP_BALBcJ_G0012927.1 mouse_genomes_project 5 4953112 4953404 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073513.1 MGP_BALBcJ_G0029908.1 mouse_genomes_project 5 113628928 113637872 + MGP_BALBcJ_P0073513 Ung protein_coding protein_coding MGP_BALBcJ_T0073514.1 MGP_BALBcJ_G0029908.1 mouse_genomes_project 5 113629771 113636921 + MGP_BALBcJ_P0073514 Ung protein_coding protein_coding MGP_BALBcJ_T0073515.1 MGP_BALBcJ_G0029908.1 mouse_genomes_project 5 113629771 113636923 + MGP_BALBcJ_P0073515 Ung protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073516.1 MGP_BALBcJ_G0029908.1 mouse_genomes_project 5 113630550 113636848 + MGP_BALBcJ_P0073516 Ung protein_coding protein_coding MGP_BALBcJ_T0073517.1 MGP_BALBcJ_G0029908.1 mouse_genomes_project 5 113630622 113633723 + Ung protein_coding retained_intron MGP_BALBcJ_T0015132.1 MGP_BALBcJ_G0013229.1 mouse_genomes_project 5 125800139 125801003 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076065.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150598683 150835394 + MGP_BALBcJ_P0076065 Fry protein_coding protein_coding MGP_BALBcJ_T0076066.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150598705 150844067 + Fry protein_coding retained_intron MGP_BALBcJ_T0076067.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150598705 150840858 + MGP_BALBcJ_P0076067 Fry protein_coding protein_coding MGP_BALBcJ_T0076068.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150677215 150835369 + MGP_BALBcJ_P0076068 Fry protein_coding protein_coding MGP_BALBcJ_T0076069.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150751012 150753378 + Fry protein_coding retained_intron MGP_BALBcJ_T0076070.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150753239 150991177 + MGP_BALBcJ_P0076070 Fry protein_coding protein_coding MGP_BALBcJ_T0076071.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150789781 150886479 + Fry protein_coding retained_intron MGP_BALBcJ_T0076072.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150895603 150898274 + Fry protein_coding retained_intron MGP_BALBcJ_T0076073.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150906677 150910131 + Fry protein_coding retained_intron MGP_BALBcJ_T0076074.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150926224 150928655 + Fry protein_coding retained_intron MGP_BALBcJ_T0076075.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150933863 150991177 + MGP_BALBcJ_P0076075 Fry protein_coding protein_coding MGP_BALBcJ_T0076076.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150946520 150991177 + MGP_BALBcJ_P0076076 Fry protein_coding protein_coding MGP_BALBcJ_T0076077.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150953138 150990317 + Fry protein_coding retained_intron MGP_BALBcJ_T0076078.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150956073 150959753 + Fry protein_coding retained_intron MGP_BALBcJ_T0076079.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150980729 150983347 + Fry protein_coding retained_intron MGP_BALBcJ_T0076080.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150983658 150985536 + Fry protein_coding retained_intron MGP_BALBcJ_T0076081.1 MGP_BALBcJ_G0030390.1 mouse_genomes_project 5 150989390 150991059 + Fry protein_coding retained_intron MGP_BALBcJ_T0102560.1 MGP_BALBcJ_G0040376.1 mouse_genomes_project 5 13162337 13163370 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001672.1 MGP_BALBcJ_G0001588.1 mouse_genomes_project 5 67140813 67143204 - TEC TEC MGP_BALBcJ_T0071916.1 MGP_BALBcJ_G0029565.1 mouse_genomes_project 5 64199105 64236994 + MGP_BALBcJ_P0071916 Nsun7 protein_coding protein_coding MGP_BALBcJ_T0071917.1 MGP_BALBcJ_G0029565.1 mouse_genomes_project 5 64199120 64237958 + MGP_BALBcJ_P0071917 Nsun7 protein_coding protein_coding MGP_BALBcJ_T0071918.1 MGP_BALBcJ_G0029565.1 mouse_genomes_project 5 64199226 64204979 + Nsun7 protein_coding retained_intron MGP_BALBcJ_T0071919.1 MGP_BALBcJ_G0029565.1 mouse_genomes_project 5 64199520 64237947 + MGP_BALBcJ_P0071919 Nsun7 protein_coding protein_coding MGP_BALBcJ_T0008121.1 MGP_BALBcJ_G0006618.1 mouse_genomes_project 5 58749459 58754169 - 1700014F14Rik lincRNA lincRNA MGP_BALBcJ_T0072151.1 MGP_BALBcJ_G0029606.1 mouse_genomes_project 5 71613706 71642349 + MGP_BALBcJ_P0072151 Spata18 protein_coding protein_coding MGP_BALBcJ_T0072152.1 MGP_BALBcJ_G0029606.1 mouse_genomes_project 5 71613709 71638260 + MGP_BALBcJ_P0072152 Spata18 protein_coding non_stop_decay MGP_BALBcJ_T0072153.1 MGP_BALBcJ_G0029606.1 mouse_genomes_project 5 71620038 71642319 + MGP_BALBcJ_P0072153 Spata18 protein_coding protein_coding MGP_BALBcJ_T0072154.1 MGP_BALBcJ_G0029606.1 mouse_genomes_project 5 71621772 71642321 + MGP_BALBcJ_P0072154 Spata18 protein_coding protein_coding MGP_BALBcJ_T0018102.1 MGP_BALBcJ_G0015535.1 mouse_genomes_project 5 48087727 48180248 - Gm36814 processed_transcript lincRNA MGP_BALBcJ_T0018103.1 MGP_BALBcJ_G0015535.1 mouse_genomes_project 5 48164709 48179288 - Gm36814 processed_transcript retained_intron MGP_BALBcJ_T0070252.1 MGP_BALBcJ_G0029284.1 mouse_genomes_project 5 15324230 15383033 + MGP_BALBcJ_P0070252 Gnat3 protein_coding protein_coding MGP_BALBcJ_T0071241.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32650188 32734243 + MGP_BALBcJ_P0071241 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071242.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32650191 32720743 + Rgs12 protein_coding retained_intron MGP_BALBcJ_T0071243.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32665516 32740292 + MGP_BALBcJ_P0071243 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071244.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32674491 32675956 + Rgs12 protein_coding processed_transcript MGP_BALBcJ_T0071245.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32675666 32720154 + Rgs12 protein_coding processed_transcript MGP_BALBcJ_T0071246.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32689794 32723820 + MGP_BALBcJ_P0071246 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071247.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32690215 32740283 + MGP_BALBcJ_P0071247 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071248.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32690481 32734101 + MGP_BALBcJ_P0071248 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071249.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32699723 32734239 + MGP_BALBcJ_P0071249 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071250.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32699850 32740283 + MGP_BALBcJ_P0071250 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071251.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32720760 32723310 + Rgs12 protein_coding retained_intron MGP_BALBcJ_T0071253.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32723478 32724984 + Rgs12 protein_coding retained_intron MGP_BALBcJ_T0071254.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32724988 32730738 + MGP_BALBcJ_P0071254 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0071255.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32727550 32732700 + Rgs12 protein_coding processed_transcript MGP_BALBcJ_T0071256.1 MGP_BALBcJ_G0029450.1 mouse_genomes_project 5 32727617 32740284 + MGP_BALBcJ_P0071256 Rgs12 protein_coding protein_coding MGP_BALBcJ_T0015188.1 MGP_BALBcJ_G0013285.1 mouse_genomes_project 5 148222386 148222880 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001669.1 MGP_BALBcJ_G0001585.1 mouse_genomes_project 5 67086506 67088083 - TEC TEC MGP_BALBcJ_T0001894.1 MGP_BALBcJ_G0001807.1 mouse_genomes_project 5 143718856 143719945 + TEC TEC MGP_BALBcJ_T0001506.1 MGP_BALBcJ_G0001424.1 mouse_genomes_project 5 33093248 33094488 - TEC TEC MGP_BALBcJ_T0015127.1 MGP_BALBcJ_G0013224.1 mouse_genomes_project 5 122833487 122833945 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076098.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151067736 151090848 - MGP_BALBcJ_P0076098 N4bp2l1 protein_coding protein_coding MGP_BALBcJ_T0076099.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151067739 151073076 - MGP_BALBcJ_P0076099 N4bp2l1 protein_coding protein_coding MGP_BALBcJ_T0076100.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151068757 151090785 - MGP_BALBcJ_P0076100 N4bp2l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076101.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151070092 151093511 - MGP_BALBcJ_P0076101 N4bp2l1 protein_coding protein_coding MGP_BALBcJ_T0076102.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151088074 151090851 - MGP_BALBcJ_P0076102 N4bp2l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076103.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151088077 151090823 - MGP_BALBcJ_P0076103 N4bp2l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076104.1 MGP_BALBcJ_G0030393.1 mouse_genomes_project 5 151088765 151090092 - N4bp2l1 protein_coding retained_intron MGP_BALBcJ_T0008241.1 MGP_BALBcJ_G0006711.1 mouse_genomes_project 5 107363649 107367334 + Gm43082 lincRNA lincRNA MGP_BALBcJ_T0074523.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124773479 124938134 - MGP_BALBcJ_P0074523 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074524.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124773479 124799115 - MGP_BALBcJ_P0074524 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074525.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124773479 124938134 - MGP_BALBcJ_P0074525 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074526.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124773481 124938134 - MGP_BALBcJ_P0074526 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074527.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124773488 124938083 - MGP_BALBcJ_P0074527 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074528.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124774161 124938134 - MGP_BALBcJ_P0074528 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074529.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124774161 124881423 - MGP_BALBcJ_P0074529 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074530.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124774218 124781814 - MGP_BALBcJ_P0074530 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074531.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124774460 124781353 - MGP_BALBcJ_P0074531 Ncor2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074532.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124774558 124779513 - Ncor2 protein_coding retained_intron MGP_BALBcJ_T0074533.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124781387 124783216 - MGP_BALBcJ_P0074533 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074534.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124781393 124782379 - Ncor2 protein_coding retained_intron MGP_BALBcJ_T0074535.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124787100 124814957 - MGP_BALBcJ_P0074535 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0074536.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124804375 124812546 - Ncor2 protein_coding retained_intron MGP_BALBcJ_T0074537.1 MGP_BALBcJ_G0030084.1 mouse_genomes_project 5 124807501 124814968 - MGP_BALBcJ_P0074537 Ncor2 protein_coding protein_coding MGP_BALBcJ_T0001703.1 MGP_BALBcJ_G0001618.1 mouse_genomes_project 5 79658182 79659129 + TEC TEC MGP_BALBcJ_T0073344.1 MGP_BALBcJ_G0029873.1 mouse_genomes_project 5 110344608 110749493 + MGP_BALBcJ_P0073344 Ttc28 protein_coding protein_coding MGP_BALBcJ_T0073345.1 MGP_BALBcJ_G0029873.1 mouse_genomes_project 5 110344608 110749492 + MGP_BALBcJ_P0073345 Ttc28 protein_coding protein_coding MGP_BALBcJ_T0073346.1 MGP_BALBcJ_G0029873.1 mouse_genomes_project 5 110344627 110381044 + Ttc28 protein_coding processed_transcript MGP_BALBcJ_T0073347.1 MGP_BALBcJ_G0029873.1 mouse_genomes_project 5 110685497 110689417 + Ttc28 protein_coding retained_intron MGP_BALBcJ_T0073348.1 MGP_BALBcJ_G0029873.1 mouse_genomes_project 5 110693270 110698255 + Ttc28 protein_coding processed_transcript MGP_BALBcJ_T0073349.1 MGP_BALBcJ_G0029873.1 mouse_genomes_project 5 110695105 110725873 + Ttc28 protein_coding retained_intron MGP_BALBcJ_T0008218.1 MGP_BALBcJ_G0006694.1 mouse_genomes_project 5 102092553 102094259 + Gm42618 lincRNA lincRNA MGP_BALBcJ_T0072944.1 MGP_BALBcJ_G0029785.1 mouse_genomes_project 5 102828613 102866662 - MGP_BALBcJ_P0072944 Sparcl1 protein_coding protein_coding MGP_BALBcJ_T0072945.1 MGP_BALBcJ_G0029785.1 mouse_genomes_project 5 102844385 102866368 - MGP_BALBcJ_P0072945 Sparcl1 protein_coding protein_coding MGP_BALBcJ_T0015033.1 MGP_BALBcJ_G0013130.1 mouse_genomes_project 5 85842934 85844849 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101716.1 MGP_BALBcJ_G0039693.1 mouse_genomes_project 5 64108928 64109307 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0008410.1 MGP_BALBcJ_G0006819.1 mouse_genomes_project 5 143531242 143532033 + Gm43397 lincRNA lincRNA MGP_BALBcJ_T0076038.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 149993961 150084268 + MGP_BALBcJ_P0076038 Wdr95 protein_coding protein_coding MGP_BALBcJ_T0076039.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 149994967 150030864 + Wdr95 protein_coding retained_intron MGP_BALBcJ_T0076040.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 149994973 150072219 + MGP_BALBcJ_P0076040 Wdr95 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076041.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 149995015 150031933 + Wdr95 protein_coding retained_intron MGP_BALBcJ_T0076042.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 149995015 150084268 + MGP_BALBcJ_P0076042 Wdr95 protein_coding protein_coding MGP_BALBcJ_T0076043.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 150001880 150030864 + Wdr95 protein_coding retained_intron MGP_BALBcJ_T0076044.1 MGP_BALBcJ_G0030386.1 mouse_genomes_project 5 150050790 150057213 + Wdr95 protein_coding retained_intron MGP_BALBcJ_T0073053.1 MGP_BALBcJ_G0029813.1 mouse_genomes_project 5 106401889 106405380 + MGP_BALBcJ_P0073053 Lpcat2b protein_coding protein_coding MGP_BALBcJ_T0072161.1 MGP_BALBcJ_G0029608.1 mouse_genomes_project 5 72166141 72170337 + MGP_BALBcJ_P0072161 Rasl11b protein_coding protein_coding MGP_BALBcJ_T0072162.1 MGP_BALBcJ_G0029608.1 mouse_genomes_project 5 72166300 72167146 + Rasl11b protein_coding retained_intron MGP_BALBcJ_T0072163.1 MGP_BALBcJ_G0029608.1 mouse_genomes_project 5 72168746 72170328 + Rasl11b protein_coding retained_intron MGP_BALBcJ_T0073676.1 MGP_BALBcJ_G0029940.1 mouse_genomes_project 5 114859372 114863262 - MGP_BALBcJ_P0073676 Dynll1 protein_coding protein_coding MGP_BALBcJ_T0073677.1 MGP_BALBcJ_G0029940.1 mouse_genomes_project 5 114860686 114862926 - Dynll1 protein_coding retained_intron MGP_BALBcJ_T0073678.1 MGP_BALBcJ_G0029940.1 mouse_genomes_project 5 114860695 114861700 - Dynll1 protein_coding processed_transcript MGP_BALBcJ_T0073679.1 MGP_BALBcJ_G0029940.1 mouse_genomes_project 5 114860769 114863175 - MGP_BALBcJ_P0073679 Dynll1 protein_coding protein_coding MGP_BALBcJ_T0073680.1 MGP_BALBcJ_G0029940.1 mouse_genomes_project 5 114861820 114863142 - Dynll1 protein_coding processed_transcript MGP_BALBcJ_T0073681.1 MGP_BALBcJ_G0029940.1 mouse_genomes_project 5 114862538 114863197 - Dynll1 protein_coding retained_intron MGP_BALBcJ_T0001717.1 MGP_BALBcJ_G0001632.1 mouse_genomes_project 5 95452229 95454375 + TEC TEC MGP_BALBcJ_T0073191.1 MGP_BALBcJ_G0029839.1 mouse_genomes_project 5 107677654 107683348 - MGP_BALBcJ_P0073191 Slc26a1 protein_coding protein_coding MGP_BALBcJ_T0073192.1 MGP_BALBcJ_G0029839.1 mouse_genomes_project 5 107678311 107682532 - MGP_BALBcJ_P0073192 Slc26a1 protein_coding protein_coding MGP_BALBcJ_T0073193.1 MGP_BALBcJ_G0029839.1 mouse_genomes_project 5 107678328 107682532 - MGP_BALBcJ_P0073193 Slc26a1 protein_coding protein_coding MGP_BALBcJ_T0073194.1 MGP_BALBcJ_G0029839.1 mouse_genomes_project 5 107679861 107682564 - MGP_BALBcJ_P0073194 Slc26a1 protein_coding protein_coding MGP_BALBcJ_T0008414.1 MGP_BALBcJ_G0006822.1 mouse_genomes_project 5 143964568 143967587 + D130017N08Rik lincRNA lincRNA MGP_BALBcJ_T0101226.1 MGP_BALBcJ_G0039262.1 mouse_genomes_project 5 120923442 120923576 + Gm26205 snoRNA snoRNA MGP_BALBcJ_T0001890.1 MGP_BALBcJ_G0001803.1 mouse_genomes_project 5 141463412 141465782 - TEC TEC MGP_BALBcJ_T0015006.1 MGP_BALBcJ_G0013103.1 mouse_genomes_project 5 73079516 73079805 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015068.1 MGP_BALBcJ_G0013165.1 mouse_genomes_project 5 102006461 102007049 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001706.1 MGP_BALBcJ_G0001621.1 mouse_genomes_project 5 85583097 85584184 + TEC TEC MGP_BALBcJ_T0001517.1 MGP_BALBcJ_G0001435.1 mouse_genomes_project 5 38962093 38963761 + TEC TEC MGP_BALBcJ_T0015059.1 MGP_BALBcJ_G0013156.1 mouse_genomes_project 5 98302424 98303233 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001783.1 MGP_BALBcJ_G0001698.1 mouse_genomes_project 5 118186948 118188294 - TEC TEC MGP_BALBcJ_T0101189.1 MGP_BALBcJ_G0039225.1 mouse_genomes_project 5 21158397 21158463 - Snord93 snoRNA snoRNA MGP_BALBcJ_T0075637.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142891859 142956681 - MGP_BALBcJ_P0075637 protein_coding protein_coding MGP_BALBcJ_T0075638.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142899305 142903822 - protein_coding processed_transcript MGP_BALBcJ_T0075639.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142900160 142904365 - protein_coding retained_intron MGP_BALBcJ_T0075640.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142922921 142986523 - MGP_BALBcJ_P0075640 protein_coding protein_coding MGP_BALBcJ_T0075641.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142932447 142934155 - protein_coding retained_intron MGP_BALBcJ_T0075642.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142956466 142968556 - protein_coding processed_transcript MGP_BALBcJ_T0075643.1 MGP_BALBcJ_G0030303.1 mouse_genomes_project 5 142961123 142986241 - MGP_BALBcJ_P0075643 protein_coding protein_coding MGP_BALBcJ_T0004824.1 MGP_BALBcJ_G0004154.1 mouse_genomes_project 5 130034867 130037483 - Gm42469 antisense antisense MGP_BALBcJ_T0070975.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29833583 29937456 + Plb1 protein_coding retained_intron MGP_BALBcJ_T0070976.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29833585 29836481 + Plb1 protein_coding retained_intron MGP_BALBcJ_T0070977.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29833585 29851402 + Plb1 protein_coding processed_transcript MGP_BALBcJ_T0070978.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29833589 29972186 + MGP_BALBcJ_P0070978 Plb1 protein_coding protein_coding MGP_BALBcJ_T0070979.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29833623 29900031 + Plb1 protein_coding retained_intron MGP_BALBcJ_T0070980.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29840340 29928863 + MGP_BALBcJ_P0070980 Plb1 protein_coding protein_coding MGP_BALBcJ_T0070981.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29848611 29972188 + MGP_BALBcJ_P0070981 Plb1 protein_coding protein_coding MGP_BALBcJ_T0070982.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29961197 29974352 + Plb1 protein_coding processed_transcript MGP_BALBcJ_T0070983.1 MGP_BALBcJ_G0029411.1 mouse_genomes_project 5 29962322 29972181 + Plb1 protein_coding processed_transcript MGP_BALBcJ_T0015133.1 MGP_BALBcJ_G0013230.1 mouse_genomes_project 5 130002717 130003119 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008203.1 MGP_BALBcJ_G0006684.1 mouse_genomes_project 5 98632249 98652114 + lincRNA lincRNA MGP_BALBcJ_T0074167.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122403410 122443910 + MGP_BALBcJ_P0074167 P2rx7 protein_coding protein_coding MGP_BALBcJ_T0074168.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122403410 122443902 + MGP_BALBcJ_P0074168 P2rx7 protein_coding protein_coding MGP_BALBcJ_T0074169.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122403438 122451047 + MGP_BALBcJ_P0074169 P2rx7 protein_coding protein_coding MGP_BALBcJ_T0074170.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122403508 122414726 + MGP_BALBcJ_P0074170 P2rx7 protein_coding protein_coding MGP_BALBcJ_T0074171.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122403664 122407292 + P2rx7 protein_coding processed_transcript MGP_BALBcJ_T0074172.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122409865 122440993 + P2rx7 protein_coding processed_transcript MGP_BALBcJ_T0074173.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122441561 122443159 + P2rx7 protein_coding processed_transcript MGP_BALBcJ_T0074174.1 MGP_BALBcJ_G0030031.1 mouse_genomes_project 5 122441801 122443897 + P2rx7 protein_coding retained_intron MGP_BALBcJ_T0010716.1 MGP_BALBcJ_G0008841.1 mouse_genomes_project 5 139473992 139474088 - Mir339 miRNA miRNA MGP_BALBcJ_T0072589.1 MGP_BALBcJ_G0029711.1 mouse_genomes_project 5 89416408 89434530 + MGP_BALBcJ_P0072589 Ereg protein_coding protein_coding MGP_BALBcJ_T0001444.1 MGP_BALBcJ_G0001365.1 mouse_genomes_project 5 9419108 9422014 - TEC TEC MGP_BALBcJ_T0014996.1 MGP_BALBcJ_G0013093.1 mouse_genomes_project 5 68439488 68440102 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070031.1 MGP_BALBcJ_G0029250.1 mouse_genomes_project 5 1734724 1738922 - MGP_BALBcJ_P0070031 Fzd1 protein_coding protein_coding MGP_BALBcJ_T0072758.1 MGP_BALBcJ_G0029745.1 mouse_genomes_project 5 96047094 96057220 - MGP_BALBcJ_P0072758 Naa11 protein_coding protein_coding MGP_BALBcJ_T0070011.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 860924 886666 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070012.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 861048 892875 + MGP_BALBcJ_P0070012 Akap9 protein_coding protein_coding MGP_BALBcJ_T0070013.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 861144 880826 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070014.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 861144 1007993 + MGP_BALBcJ_P0070014 Akap9 protein_coding protein_coding MGP_BALBcJ_T0070015.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 883140 889556 + Akap9 protein_coding processed_transcript MGP_BALBcJ_T0070016.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 883151 883732 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070017.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 886615 889612 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070018.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 903382 912783 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070019.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 907030 907946 + MGP_BALBcJ_P0070019 Akap9 protein_coding protein_coding MGP_BALBcJ_T0070020.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 958378 960541 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070021.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 985985 987661 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070022.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 991112 992115 + MGP_BALBcJ_P0070022 Akap9 protein_coding protein_coding MGP_BALBcJ_T0070023.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 991234 991713 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0070024.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 992034 997140 + MGP_BALBcJ_P0070024 Akap9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070025.1 MGP_BALBcJ_G0029248.1 mouse_genomes_project 5 994223 994697 + Akap9 protein_coding retained_intron MGP_BALBcJ_T0072103.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 70976892 71117360 - MGP_BALBcJ_P0072103 Fryl protein_coding protein_coding MGP_BALBcJ_T0072104.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 70977015 71031541 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072105.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 70977015 71113381 - MGP_BALBcJ_P0072105 Fryl protein_coding protein_coding MGP_BALBcJ_T0072106.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 70993029 71047636 - MGP_BALBcJ_P0072106 Fryl protein_coding protein_coding MGP_BALBcJ_T0072107.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 70999041 71002035 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072108.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 70999144 71042505 - Fryl protein_coding processed_transcript MGP_BALBcJ_T0072109.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71005397 71006328 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072110.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71015756 71016636 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072111.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71016826 71031263 - MGP_BALBcJ_P0072111 Fryl protein_coding protein_coding MGP_BALBcJ_T0072112.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71032923 71036038 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072113.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71060743 71061737 - MGP_BALBcJ_P0072113 Fryl protein_coding protein_coding MGP_BALBcJ_T0072114.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71062871 71133073 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072115.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71072156 71085460 - MGP_BALBcJ_P0072115 Fryl protein_coding protein_coding MGP_BALBcJ_T0072116.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71083942 71087870 - MGP_BALBcJ_P0072116 Fryl protein_coding protein_coding MGP_BALBcJ_T0072117.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71084874 71224447 - Fryl protein_coding retained_intron MGP_BALBcJ_T0072118.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71113282 71158949 - MGP_BALBcJ_P0072118 Fryl protein_coding protein_coding MGP_BALBcJ_T0072119.1 MGP_BALBcJ_G0029599.1 mouse_genomes_project 5 71160873 71224611 - Fryl protein_coding retained_intron MGP_BALBcJ_T0071945.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64691080 64924907 + Limch1 protein_coding retained_intron MGP_BALBcJ_T0071946.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64691120 64693649 + Limch1 protein_coding retained_intron MGP_BALBcJ_T0071947.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64691136 65000198 + MGP_BALBcJ_P0071947 Limch1 protein_coding protein_coding MGP_BALBcJ_T0071948.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64691142 64904085 + MGP_BALBcJ_P0071948 Limch1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071949.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64691163 65001289 + MGP_BALBcJ_P0071949 Limch1 protein_coding protein_coding MGP_BALBcJ_T0071950.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64848817 64919398 + MGP_BALBcJ_P0071950 Limch1 protein_coding protein_coding MGP_BALBcJ_T0071951.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64918249 64998817 + Limch1 protein_coding processed_transcript MGP_BALBcJ_T0071952.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64918660 65001280 + MGP_BALBcJ_P0071952 Limch1 protein_coding protein_coding MGP_BALBcJ_T0071953.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64918809 64981410 + Limch1 protein_coding retained_intron MGP_BALBcJ_T0071954.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64918821 64948986 + MGP_BALBcJ_P0071954 Limch1 protein_coding protein_coding MGP_BALBcJ_T0071955.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64918894 64925160 + Limch1 protein_coding retained_intron MGP_BALBcJ_T0071956.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64919205 64949016 + MGP_BALBcJ_P0071956 Limch1 protein_coding protein_coding MGP_BALBcJ_T0071957.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64927262 64949462 + Limch1 protein_coding processed_transcript MGP_BALBcJ_T0071958.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64947318 64949567 + Limch1 protein_coding retained_intron MGP_BALBcJ_T0071959.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64988467 64998769 + Limch1 protein_coding processed_transcript MGP_BALBcJ_T0071960.1 MGP_BALBcJ_G0029568.1 mouse_genomes_project 5 64988522 64998764 + MGP_BALBcJ_P0071960 Limch1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101192.1 MGP_BALBcJ_G0039228.1 mouse_genomes_project 5 50626151 50626263 - Gm23532 snoRNA snoRNA MGP_BALBcJ_T0015013.1 MGP_BALBcJ_G0013110.1 mouse_genomes_project 5 74741608 74742049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102587.1 MGP_BALBcJ_G0040403.1 mouse_genomes_project 5 146047597 146066794 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001756.1 MGP_BALBcJ_G0001671.1 mouse_genomes_project 5 111831781 111833042 + TEC TEC MGP_BALBcJ_T0072038.1 MGP_BALBcJ_G0029585.1 mouse_genomes_project 5 69454783 69549682 - MGP_BALBcJ_P0072038 Gabra4 protein_coding protein_coding MGP_BALBcJ_T0072039.1 MGP_BALBcJ_G0029585.1 mouse_genomes_project 5 69456235 69549355 - MGP_BALBcJ_P0072039 Gabra4 protein_coding protein_coding MGP_BALBcJ_T0072040.1 MGP_BALBcJ_G0029585.1 mouse_genomes_project 5 69456640 69549264 - MGP_BALBcJ_P0072040 Gabra4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072041.1 MGP_BALBcJ_G0029585.1 mouse_genomes_project 5 69457089 69549249 - MGP_BALBcJ_P0072041 Gabra4 protein_coding protein_coding MGP_BALBcJ_T0072042.1 MGP_BALBcJ_G0029585.1 mouse_genomes_project 5 69546569 69549194 - Gabra4 protein_coding retained_intron MGP_BALBcJ_T0070552.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24336773 24373543 + Dpp6 protein_coding processed_transcript MGP_BALBcJ_T0070553.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24336927 25256210 + MGP_BALBcJ_P0070553 Dpp6 protein_coding protein_coding MGP_BALBcJ_T0070554.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24337004 24973941 + Dpp6 protein_coding retained_intron MGP_BALBcJ_T0070555.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24427496 25257263 + MGP_BALBcJ_P0070555 Dpp6 protein_coding protein_coding MGP_BALBcJ_T0070556.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24581199 25257259 + MGP_BALBcJ_P0070556 Dpp6 protein_coding protein_coding MGP_BALBcJ_T0070557.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24581392 24584130 + Dpp6 protein_coding retained_intron MGP_BALBcJ_T0070558.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24794475 25257258 + MGP_BALBcJ_P0070558 Dpp6 protein_coding protein_coding MGP_BALBcJ_T0070559.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 24794475 24920343 + MGP_BALBcJ_P0070559 Dpp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070560.1 MGP_BALBcJ_G0029342.1 mouse_genomes_project 5 25058790 25226910 + Dpp6 protein_coding retained_intron MGP_BALBcJ_T0075164.1 MGP_BALBcJ_G0030199.1 mouse_genomes_project 5 137216914 137217951 + MGP_BALBcJ_P0075164 Ufsp1 protein_coding protein_coding MGP_BALBcJ_T0008268.1 MGP_BALBcJ_G0006725.1 mouse_genomes_project 5 111257459 111271902 + Gm42487 lincRNA lincRNA MGP_BALBcJ_T0008269.1 MGP_BALBcJ_G0006725.1 mouse_genomes_project 5 111259289 111271819 + Gm42487 lincRNA lincRNA MGP_BALBcJ_T0075565.1 MGP_BALBcJ_G0030285.1 mouse_genomes_project 5 140539136 140562565 + MGP_BALBcJ_P0075565 Eif3b protein_coding protein_coding MGP_BALBcJ_T0075566.1 MGP_BALBcJ_G0030285.1 mouse_genomes_project 5 140546899 140550481 + Eif3b protein_coding retained_intron MGP_BALBcJ_T0075567.1 MGP_BALBcJ_G0030285.1 mouse_genomes_project 5 140559154 140561902 + MGP_BALBcJ_P0075567 Eif3b protein_coding protein_coding MGP_BALBcJ_T0004698.1 MGP_BALBcJ_G0004065.1 mouse_genomes_project 5 70198831 70251553 + Gm20647 antisense antisense MGP_BALBcJ_T0070577.1 MGP_BALBcJ_G0029348.1 mouse_genomes_project 5 25893814 25929566 + MGP_BALBcJ_P0070577 Rbm33 protein_coding non_stop_decay MGP_BALBcJ_T0070578.1 MGP_BALBcJ_G0029348.1 mouse_genomes_project 5 25893870 25992435 + MGP_BALBcJ_P0070578 Rbm33 protein_coding protein_coding MGP_BALBcJ_T0070579.1 MGP_BALBcJ_G0029348.1 mouse_genomes_project 5 25893870 25995574 + MGP_BALBcJ_P0070579 Rbm33 protein_coding protein_coding MGP_BALBcJ_T0070580.1 MGP_BALBcJ_G0029348.1 mouse_genomes_project 5 25893895 25932446 + MGP_BALBcJ_P0070580 Rbm33 protein_coding protein_coding MGP_BALBcJ_T0070581.1 MGP_BALBcJ_G0029348.1 mouse_genomes_project 5 25970480 25990006 + MGP_BALBcJ_P0070581 Rbm33 protein_coding protein_coding MGP_BALBcJ_T0070582.1 MGP_BALBcJ_G0029348.1 mouse_genomes_project 5 25986988 25990359 + MGP_BALBcJ_P0070582 Rbm33 protein_coding protein_coding MGP_BALBcJ_T0075787.1 MGP_BALBcJ_G0030334.1 mouse_genomes_project 5 144433604 144634308 + MGP_BALBcJ_P0075787 Bri3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075788.1 MGP_BALBcJ_G0030334.1 mouse_genomes_project 5 144433613 144442838 + MGP_BALBcJ_P0075788 Bri3 protein_coding protein_coding MGP_BALBcJ_T0004610.1 MGP_BALBcJ_G0003993.1 mouse_genomes_project 5 427199 428647 - Gm42435 antisense antisense MGP_BALBcJ_T0072978.1 MGP_BALBcJ_G0029799.1 mouse_genomes_project 5 104098677 104167665 - MGP_BALBcJ_P0072978 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098767.1 MGP_BALBcJ_G0036821.1 mouse_genomes_project 5 90401849 90401978 - Gm22728 scaRNA scaRNA MGP_BALBcJ_T0072289.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74972945 74999433 + MGP_BALBcJ_P0072289 Srp72 protein_coding protein_coding MGP_BALBcJ_T0072290.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74972969 74998312 + MGP_BALBcJ_P0072290 Srp72 protein_coding protein_coding MGP_BALBcJ_T0072291.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74972983 74979181 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0072292.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74979169 74981305 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0072293.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74982685 74994642 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0072294.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74992893 74993804 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0072295.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74994752 74996985 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0072296.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74996469 74999433 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0072297.1 MGP_BALBcJ_G0029628.1 mouse_genomes_project 5 74996900 74997837 + Srp72 protein_coding retained_intron MGP_BALBcJ_T0008263.1 MGP_BALBcJ_G0006722.1 mouse_genomes_project 5 111052593 111053262 + Gm42489 lincRNA lincRNA MGP_BALBcJ_T0014907.1 MGP_BALBcJ_G0013004.1 mouse_genomes_project 5 29786060 29786643 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075677.1 MGP_BALBcJ_G0030309.1 mouse_genomes_project 5 143363157 143397015 + MGP_BALBcJ_P0075677 Spdye4b protein_coding protein_coding MGP_BALBcJ_T0075678.1 MGP_BALBcJ_G0030309.1 mouse_genomes_project 5 143385943 143396495 + Spdye4b protein_coding processed_transcript MGP_BALBcJ_T0014945.1 MGP_BALBcJ_G0013042.1 mouse_genomes_project 5 47223297 47224913 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074325.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123484504 123512133 - MGP_BALBcJ_P0074325 Zcchc8 protein_coding protein_coding MGP_BALBcJ_T0074326.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123484512 123512077 - MGP_BALBcJ_P0074326 Zcchc8 protein_coding protein_coding MGP_BALBcJ_T0074327.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123486008 123489628 - Zcchc8 protein_coding retained_intron MGP_BALBcJ_T0074328.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123491293 123510536 - MGP_BALBcJ_P0074328 Zcchc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074329.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123491310 123495255 - Zcchc8 protein_coding retained_intron MGP_BALBcJ_T0074330.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123495060 123504531 - MGP_BALBcJ_P0074330 Zcchc8 protein_coding protein_coding MGP_BALBcJ_T0074331.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123495967 123511856 - MGP_BALBcJ_P0074331 Zcchc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074332.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123497508 123511895 - MGP_BALBcJ_P0074332 Zcchc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074333.1 MGP_BALBcJ_G0030053.1 mouse_genomes_project 5 123504539 123511807 - MGP_BALBcJ_P0074333 Zcchc8 protein_coding protein_coding MGP_BALBcJ_T0075123.1 MGP_BALBcJ_G0030189.1 mouse_genomes_project 5 136898549 136907690 + MGP_BALBcJ_P0075123 Cldn15 protein_coding protein_coding MGP_BALBcJ_T0075124.1 MGP_BALBcJ_G0030189.1 mouse_genomes_project 5 136899810 136907676 + MGP_BALBcJ_P0075124 Cldn15 protein_coding protein_coding MGP_BALBcJ_T0075125.1 MGP_BALBcJ_G0030189.1 mouse_genomes_project 5 136905787 136906845 + Cldn15 protein_coding processed_transcript MGP_BALBcJ_T0001626.1 MGP_BALBcJ_G0001542.1 mouse_genomes_project 5 63216225 63217412 - TEC TEC MGP_BALBcJ_T0015164.1 MGP_BALBcJ_G0013261.1 mouse_genomes_project 5 143339366 143339748 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008289.1 MGP_BALBcJ_G0006738.1 mouse_genomes_project 5 114863382 114881168 + Gm13830 lincRNA lincRNA MGP_BALBcJ_T0008290.1 MGP_BALBcJ_G0006738.1 mouse_genomes_project 5 114863398 114864561 + Gm13830 lincRNA lincRNA MGP_BALBcJ_T0008291.1 MGP_BALBcJ_G0006738.1 mouse_genomes_project 5 114863399 114879567 + Gm13830 lincRNA lincRNA MGP_BALBcJ_T0008292.1 MGP_BALBcJ_G0006738.1 mouse_genomes_project 5 114863409 114864594 + Gm13830 lincRNA lincRNA MGP_BALBcJ_T0008293.1 MGP_BALBcJ_G0006738.1 mouse_genomes_project 5 114863469 114863999 + Gm13830 lincRNA lincRNA MGP_BALBcJ_T0074670.1 MGP_BALBcJ_G0030113.1 mouse_genomes_project 5 129706696 129709445 + MGP_BALBcJ_P0074670 Nupr1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074671.1 MGP_BALBcJ_G0030113.1 mouse_genomes_project 5 129706698 129712010 + MGP_BALBcJ_P0074671 Nupr1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074672.1 MGP_BALBcJ_G0030113.1 mouse_genomes_project 5 129706724 129708557 + MGP_BALBcJ_P0074672 Nupr1l protein_coding protein_coding MGP_BALBcJ_T0074673.1 MGP_BALBcJ_G0030113.1 mouse_genomes_project 5 129709133 129709445 + Nupr1l protein_coding processed_transcript MGP_BALBcJ_T0001607.1 MGP_BALBcJ_G0001524.1 mouse_genomes_project 5 55716126 55717481 + TEC TEC MGP_BALBcJ_T0001754.1 MGP_BALBcJ_G0001669.1 mouse_genomes_project 5 110791163 110791957 - TEC TEC MGP_BALBcJ_T0001615.1 MGP_BALBcJ_G0001532.1 mouse_genomes_project 5 55967008 55968888 - TEC TEC MGP_BALBcJ_T0014846.1 MGP_BALBcJ_G0012943.1 mouse_genomes_project 5 13266985 13267229 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070308.1 MGP_BALBcJ_G0029296.1 mouse_genomes_project 5 18918560 18927351 + Lrrc17 protein_coding processed_transcript MGP_BALBcJ_T0070309.1 MGP_BALBcJ_G0029296.1 mouse_genomes_project 5 18918564 18952334 + MGP_BALBcJ_P0070309 Lrrc17 protein_coding protein_coding MGP_BALBcJ_T0099979.1 MGP_BALBcJ_G0038015.1 mouse_genomes_project 5 141711327 141711434 - Gm24131 snRNA snRNA MGP_BALBcJ_T0001768.1 MGP_BALBcJ_G0001683.1 mouse_genomes_project 5 114356271 114366264 - TEC TEC MGP_BALBcJ_T0015192.1 MGP_BALBcJ_G0013289.1 mouse_genomes_project 5 149963480 149964030 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001545.1 MGP_BALBcJ_G0001463.1 mouse_genomes_project 5 43405201 43408620 - TEC TEC MGP_BALBcJ_T0011576.1 MGP_BALBcJ_G0009701.1 mouse_genomes_project 5 88043756 88044080 + Gm25320 misc_RNA misc_RNA MGP_BALBcJ_T0001817.1 MGP_BALBcJ_G0001732.1 mouse_genomes_project 5 123803865 123805371 + TEC TEC MGP_BALBcJ_T0008240.1 MGP_BALBcJ_G0006710.1 mouse_genomes_project 5 106665896 106671186 - 4930428O21Rik lincRNA lincRNA MGP_BALBcJ_T0075331.1 MGP_BALBcJ_G0030235.1 mouse_genomes_project 5 138058383 138081818 + MGP_BALBcJ_P0075331 Zkscan1 protein_coding protein_coding MGP_BALBcJ_T0075332.1 MGP_BALBcJ_G0030235.1 mouse_genomes_project 5 138058383 138081818 + MGP_BALBcJ_P0075332 Zkscan1 protein_coding protein_coding MGP_BALBcJ_T0075333.1 MGP_BALBcJ_G0030235.1 mouse_genomes_project 5 138058419 138078494 + MGP_BALBcJ_P0075333 Zkscan1 protein_coding protein_coding MGP_BALBcJ_T0075334.1 MGP_BALBcJ_G0030235.1 mouse_genomes_project 5 138066628 138078493 + MGP_BALBcJ_P0075334 Zkscan1 protein_coding protein_coding MGP_BALBcJ_T0072482.1 MGP_BALBcJ_G0029676.1 mouse_genomes_project 5 86391118 86410820 + MGP_BALBcJ_P0072482 Smr2 protein_coding protein_coding MGP_BALBcJ_T0070469.1 MGP_BALBcJ_G0029322.1 mouse_genomes_project 5 21931363 21933760 - MGP_BALBcJ_P0070469 Tmub1 protein_coding protein_coding MGP_BALBcJ_T0070470.1 MGP_BALBcJ_G0029322.1 mouse_genomes_project 5 21931371 21933531 - MGP_BALBcJ_P0070470 Tmub1 protein_coding protein_coding MGP_BALBcJ_T0070471.1 MGP_BALBcJ_G0029322.1 mouse_genomes_project 5 21931371 21933223 - MGP_BALBcJ_P0070471 Tmub1 protein_coding protein_coding MGP_BALBcJ_T0070472.1 MGP_BALBcJ_G0029322.1 mouse_genomes_project 5 21931954 21933493 - MGP_BALBcJ_P0070472 Tmub1 protein_coding protein_coding MGP_BALBcJ_T0070473.1 MGP_BALBcJ_G0029322.1 mouse_genomes_project 5 21932458 21933697 - MGP_BALBcJ_P0070473 Tmub1 protein_coding protein_coding MGP_BALBcJ_T0001624.1 MGP_BALBcJ_G0001540.1 mouse_genomes_project 5 62691189 62692911 + TEC TEC MGP_BALBcJ_T0073139.1 MGP_BALBcJ_G0029830.1 mouse_genomes_project 5 107391823 107436133 + MGP_BALBcJ_P0073139 Pde6b protein_coding protein_coding MGP_BALBcJ_T0073140.1 MGP_BALBcJ_G0029830.1 mouse_genomes_project 5 107391858 107436057 + Pde6b protein_coding retained_intron MGP_BALBcJ_T0073141.1 MGP_BALBcJ_G0029830.1 mouse_genomes_project 5 107434766 107436787 + Pde6b protein_coding retained_intron MGP_BALBcJ_T0070049.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2499861 2526530 - Cldn12 protein_coding processed_transcript MGP_BALBcJ_T0070050.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2516666 2526407 - MGP_BALBcJ_P0070050 Cldn12 protein_coding protein_coding MGP_BALBcJ_T0070051.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2516760 2526491 - MGP_BALBcJ_P0070051 Cldn12 protein_coding protein_coding MGP_BALBcJ_T0070052.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2516762 2526443 - MGP_BALBcJ_P0070052 Cldn12 protein_coding protein_coding MGP_BALBcJ_T0070053.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2516874 2526348 - MGP_BALBcJ_P0070053 Cldn12 protein_coding protein_coding MGP_BALBcJ_T0070054.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2520059 2526407 - MGP_BALBcJ_P0070054 Cldn12 protein_coding protein_coding MGP_BALBcJ_T0070055.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2522717 2526576 - Cldn12 protein_coding processed_transcript MGP_BALBcJ_T0070056.1 MGP_BALBcJ_G0029253.1 mouse_genomes_project 5 2524845 2526067 - Cldn12 protein_coding processed_transcript MGP_BALBcJ_T0072486.1 MGP_BALBcJ_G0029680.1 mouse_genomes_project 5 86675443 86693920 + MGP_BALBcJ_P0072486 Prol1 protein_coding protein_coding MGP_BALBcJ_T0008234.1 MGP_BALBcJ_G0006705.1 mouse_genomes_project 5 105418811 105424017 - Gm26872 lincRNA lincRNA MGP_BALBcJ_T0008013.1 MGP_BALBcJ_G0006541.1 mouse_genomes_project 5 3444814 3457324 + Gm43325 lincRNA lincRNA MGP_BALBcJ_T0001433.1 MGP_BALBcJ_G0001354.1 mouse_genomes_project 5 4249145 4252262 - TEC TEC MGP_BALBcJ_T0072420.1 MGP_BALBcJ_G0029660.1 mouse_genomes_project 5 85677853 85702396 - MGP_BALBcJ_P0072420 Ugt2a2 protein_coding protein_coding MGP_BALBcJ_T0072422.1 MGP_BALBcJ_G0029660.1 mouse_genomes_project 5 85678722 85702398 - MGP_BALBcJ_P0072422 Ugt2a2 protein_coding protein_coding MGP_BALBcJ_T0102582.1 MGP_BALBcJ_G0040398.1 mouse_genomes_project 5 136933947 136937525 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008170.1 MGP_BALBcJ_G0006655.1 mouse_genomes_project 5 82588830 82592640 + Gm43532 lincRNA lincRNA MGP_BALBcJ_T0001773.1 MGP_BALBcJ_G0001688.1 mouse_genomes_project 5 115451932 115454222 + TEC TEC MGP_BALBcJ_T0001813.1 MGP_BALBcJ_G0001728.1 mouse_genomes_project 5 123186889 123187756 + TEC TEC MGP_BALBcJ_T0010692.1 MGP_BALBcJ_G0008817.1 mouse_genomes_project 5 118041477 118041569 - Gm26455 miRNA miRNA MGP_BALBcJ_T0072883.1 MGP_BALBcJ_G0029773.1 mouse_genomes_project 5 100568986 100716723 - MGP_BALBcJ_P0072883 protein_coding unknown_likely_coding MGP_BALBcJ_T0072884.1 MGP_BALBcJ_G0029773.1 mouse_genomes_project 5 100660192 100668241 - MGP_BALBcJ_P0072884 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072885.1 MGP_BALBcJ_G0029773.1 mouse_genomes_project 5 100666681 100806328 - MGP_BALBcJ_P0072885 protein_coding protein_coding MGP_BALBcJ_T0072886.1 MGP_BALBcJ_G0029773.1 mouse_genomes_project 5 100672468 100675064 - protein_coding processed_transcript MGP_BALBcJ_T0001576.1 MGP_BALBcJ_G0001493.1 mouse_genomes_project 5 46888032 46890518 - TEC TEC MGP_BALBcJ_T0072601.1 MGP_BALBcJ_G0029716.1 mouse_genomes_project 5 90329431 90335160 + Gm1045 protein_coding retained_intron MGP_BALBcJ_T0072602.1 MGP_BALBcJ_G0029716.1 mouse_genomes_project 5 90329431 90340189 + MGP_BALBcJ_P0072602 Gm1045 protein_coding protein_coding MGP_BALBcJ_T0101915.1 MGP_BALBcJ_G0039797.1 mouse_genomes_project 5 30157390 30164139 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101916.1 MGP_BALBcJ_G0039797.1 mouse_genomes_project 5 30157394 30164195 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0008215.1 MGP_BALBcJ_G0006692.1 mouse_genomes_project 5 100806624 100808188 + Gm29707 lincRNA lincRNA MGP_BALBcJ_T0008216.1 MGP_BALBcJ_G0006692.1 mouse_genomes_project 5 100807255 100807746 + Gm29707 lincRNA lincRNA MGP_BALBcJ_T0101216.1 MGP_BALBcJ_G0039252.1 mouse_genomes_project 5 98348929 98349061 + Gm25969 snoRNA snoRNA MGP_BALBcJ_T0075604.1 MGP_BALBcJ_G0030294.1 mouse_genomes_project 5 141005229 141135100 - MGP_BALBcJ_P0075604 Card11 protein_coding protein_coding MGP_BALBcJ_T0075605.1 MGP_BALBcJ_G0030294.1 mouse_genomes_project 5 141005231 141014453 - Card11 protein_coding retained_intron MGP_BALBcJ_T0075606.1 MGP_BALBcJ_G0030294.1 mouse_genomes_project 5 141045292 141134989 - Card11 protein_coding retained_intron MGP_BALBcJ_T0001523.1 MGP_BALBcJ_G0001441.1 mouse_genomes_project 5 41398249 41399600 - TEC TEC MGP_BALBcJ_T0098614.1 MGP_BALBcJ_G0036668.1 mouse_genomes_project 5 89260007 89260124 + Gm22816 rRNA rRNA MGP_BALBcJ_T0001608.1 MGP_BALBcJ_G0001525.1 mouse_genomes_project 5 55720257 55721724 + TEC TEC MGP_BALBcJ_T0001560.1 MGP_BALBcJ_G0001478.1 mouse_genomes_project 5 46511905 46514802 - TEC TEC MGP_BALBcJ_T0001446.1 MGP_BALBcJ_G0001367.1 mouse_genomes_project 5 10407375 10409875 - TEC TEC MGP_BALBcJ_T0001869.1 MGP_BALBcJ_G0001783.1 mouse_genomes_project 5 133919735 133920701 - TEC TEC MGP_BALBcJ_T0004700.1 MGP_BALBcJ_G0004067.1 mouse_genomes_project 5 71979835 71995326 + Usp46os1 antisense antisense MGP_BALBcJ_T0004839.1 MGP_BALBcJ_G0004167.1 mouse_genomes_project 5 136044750 136045455 - Gm43604 antisense antisense MGP_BALBcJ_T0008114.1 MGP_BALBcJ_G0006612.1 mouse_genomes_project 5 50963505 50965205 + lincRNA lincRNA MGP_BALBcJ_T0070943.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29201064 29259852 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0070944.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29202875 29226884 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0070945.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29217884 29226884 + MGP_BALBcJ_P0070945 Mrpl33 protein_coding protein_coding MGP_BALBcJ_T0070946.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29217901 29246793 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0070947.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29217917 29259852 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0070948.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29217930 29269375 + MGP_BALBcJ_P0070948 Mrpl33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070949.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29217958 29226882 + Mrpl33 protein_coding retained_intron MGP_BALBcJ_T0070950.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29217962 29226877 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0070951.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29218097 29226812 + Mrpl33 protein_coding retained_intron MGP_BALBcJ_T0070954.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29259615 29263121 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0070955.1 MGP_BALBcJ_G0029407.1 mouse_genomes_project 5 29260486 29268422 + Mrpl33 protein_coding processed_transcript MGP_BALBcJ_T0015175.1 MGP_BALBcJ_G0013272.1 mouse_genomes_project 5 145839135 145839297 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001737.1 MGP_BALBcJ_G0001652.1 mouse_genomes_project 5 103194305 103195555 + TEC TEC MGP_BALBcJ_T0008395.1 MGP_BALBcJ_G0006805.1 mouse_genomes_project 5 137117263 137123796 + Gm42562 lincRNA lincRNA MGP_BALBcJ_T0001723.1 MGP_BALBcJ_G0001638.1 mouse_genomes_project 5 96668525 96670112 - TEC TEC MGP_BALBcJ_T0001820.1 MGP_BALBcJ_G0001735.1 mouse_genomes_project 5 124233670 124235631 + TEC TEC MGP_BALBcJ_T0001821.1 MGP_BALBcJ_G0001735.1 mouse_genomes_project 5 124234586 124235760 + TEC TEC MGP_BALBcJ_T0008411.1 MGP_BALBcJ_G0006820.1 mouse_genomes_project 5 143591312 143595081 - Gm42504 lincRNA lincRNA MGP_BALBcJ_T0008177.1 MGP_BALBcJ_G0006662.1 mouse_genomes_project 5 89278191 89280362 + lincRNA lincRNA MGP_BALBcJ_T0010681.1 MGP_BALBcJ_G0008806.1 mouse_genomes_project 5 102799321 102799382 + Mir5619 miRNA miRNA MGP_BALBcJ_T0070514.1 MGP_BALBcJ_G0029333.1 mouse_genomes_project 5 22288639 22328520 - MGP_BALBcJ_P0070514 Rheb protein_coding protein_coding MGP_BALBcJ_T0070515.1 MGP_BALBcJ_G0029333.1 mouse_genomes_project 5 22289483 22299771 - Rheb protein_coding retained_intron MGP_BALBcJ_T0070516.1 MGP_BALBcJ_G0029333.1 mouse_genomes_project 5 22295982 22328324 - Rheb protein_coding retained_intron MGP_BALBcJ_T0070517.1 MGP_BALBcJ_G0029333.1 mouse_genomes_project 5 22325899 22328505 - Rheb protein_coding retained_intron MGP_BALBcJ_T0015167.1 MGP_BALBcJ_G0013264.1 mouse_genomes_project 5 143649267 143649804 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008182.1 MGP_BALBcJ_G0006667.1 mouse_genomes_project 5 90388642 90401746 + Gm26582 lincRNA lincRNA MGP_BALBcJ_T0099983.1 MGP_BALBcJ_G0038019.1 mouse_genomes_project 5 151206881 151206987 + Gm24630 snRNA snRNA MGP_BALBcJ_T0010706.1 MGP_BALBcJ_G0008831.1 mouse_genomes_project 5 136029251 136029333 + Mir7035 miRNA miRNA MGP_BALBcJ_T0004823.1 MGP_BALBcJ_G0004153.1 mouse_genomes_project 5 128571550 128579917 + Gm42875 antisense antisense MGP_BALBcJ_T0001439.1 MGP_BALBcJ_G0001360.1 mouse_genomes_project 5 5850947 5851248 + TEC TEC MGP_BALBcJ_T0011568.1 MGP_BALBcJ_G0009693.1 mouse_genomes_project 5 20948083 20948413 - Gm25219 misc_RNA misc_RNA MGP_BALBcJ_T0072072.1 MGP_BALBcJ_G0029591.1 mouse_genomes_project 5 70577740 70601025 + MGP_BALBcJ_P0072072 Nipal1 protein_coding protein_coding MGP_BALBcJ_T0072073.1 MGP_BALBcJ_G0029591.1 mouse_genomes_project 5 70577758 70597569 + MGP_BALBcJ_P0072073 Nipal1 protein_coding protein_coding MGP_BALBcJ_T0072074.1 MGP_BALBcJ_G0029591.1 mouse_genomes_project 5 70577787 70589081 + Nipal1 protein_coding retained_intron MGP_BALBcJ_T0001670.1 MGP_BALBcJ_G0001586.1 mouse_genomes_project 5 67099191 67100222 - TEC TEC MGP_BALBcJ_T0101209.1 MGP_BALBcJ_G0039245.1 mouse_genomes_project 5 81867353 81867481 - Gm24792 snoRNA snoRNA MGP_BALBcJ_T0014885.1 MGP_BALBcJ_G0012982.1 mouse_genomes_project 5 22619681 22620247 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001696.1 MGP_BALBcJ_G0001611.1 mouse_genomes_project 5 72985513 72988359 - TEC TEC MGP_BALBcJ_T0008284.1 MGP_BALBcJ_G0006733.1 mouse_genomes_project 5 112123973 112126712 + Gm42864 lincRNA lincRNA MGP_BALBcJ_T0008148.1 MGP_BALBcJ_G0006638.1 mouse_genomes_project 5 72720628 72725194 + Gm42575 lincRNA lincRNA MGP_BALBcJ_T0015178.1 MGP_BALBcJ_G0013275.1 mouse_genomes_project 5 146211800 146211960 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098961.1 MGP_BALBcJ_G0037008.1 mouse_genomes_project 5 28358334 28361192 + Gm19409 sense_intronic sense_intronic MGP_BALBcJ_T0071755.1 MGP_BALBcJ_G0029538.1 mouse_genomes_project 5 60675962 60748207 + MGP_BALBcJ_P0071755 Dthd1 protein_coding protein_coding MGP_BALBcJ_T0001643.1 MGP_BALBcJ_G0001559.1 mouse_genomes_project 5 63882051 63882952 + TEC TEC MGP_BALBcJ_T0071843.1 MGP_BALBcJ_G0029556.1 mouse_genomes_project 5 63337770 63405245 - MGP_BALBcJ_P0071843 Gm43552 protein_coding protein_coding MGP_BALBcJ_T0072279.1 MGP_BALBcJ_G0029626.1 mouse_genomes_project 5 74916830 74949138 - MGP_BALBcJ_P0072279 Ppat protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072280.1 MGP_BALBcJ_G0029626.1 mouse_genomes_project 5 74916857 74949144 - MGP_BALBcJ_P0072280 Ppat protein_coding protein_coding MGP_BALBcJ_T0072281.1 MGP_BALBcJ_G0029626.1 mouse_genomes_project 5 74918625 74948731 - Ppat protein_coding retained_intron MGP_BALBcJ_T0074607.1 MGP_BALBcJ_G0030100.1 mouse_genomes_project 5 128830534 128831121 + protein_coding processed_transcript MGP_BALBcJ_T0072570.1 MGP_BALBcJ_G0029703.1 mouse_genomes_project 5 89134149 89135693 + MGP_BALBcJ_P0072570 Ppbp protein_coding protein_coding MGP_BALBcJ_T0075619.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142647778 142707785 - MGP_BALBcJ_P0075619 Radil protein_coding protein_coding MGP_BALBcJ_T0075620.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142647783 142714908 - Radil protein_coding retained_intron MGP_BALBcJ_T0075621.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142647783 142708874 - MGP_BALBcJ_P0075621 Radil protein_coding protein_coding MGP_BALBcJ_T0075622.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142647820 142714923 - MGP_BALBcJ_P0075622 Radil protein_coding protein_coding MGP_BALBcJ_T0075623.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142649424 142650511 - Radil protein_coding retained_intron MGP_BALBcJ_T0075624.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142670881 142672256 - MGP_BALBcJ_P0075624 Radil protein_coding protein_coding MGP_BALBcJ_T0075626.1 MGP_BALBcJ_G0030298.1 mouse_genomes_project 5 142707463 142714811 - MGP_BALBcJ_P0075626 Radil protein_coding protein_coding MGP_BALBcJ_T0001822.1 MGP_BALBcJ_G0001736.1 mouse_genomes_project 5 124344676 124346040 + TEC TEC MGP_BALBcJ_T0070312.1 MGP_BALBcJ_G0029297.1 mouse_genomes_project 5 19022477 19037674 + MGP_BALBcJ_P0070312 Armc10 protein_coding protein_coding MGP_BALBcJ_T0070313.1 MGP_BALBcJ_G0029297.1 mouse_genomes_project 5 19022543 19038752 + MGP_BALBcJ_P0070313 Armc10 protein_coding protein_coding MGP_BALBcJ_T0070314.1 MGP_BALBcJ_G0029297.1 mouse_genomes_project 5 19022681 19025328 + Armc10 protein_coding processed_transcript MGP_BALBcJ_T0070315.1 MGP_BALBcJ_G0029297.1 mouse_genomes_project 5 19022717 19038666 + MGP_BALBcJ_P0070315 Armc10 protein_coding protein_coding MGP_BALBcJ_T0070316.1 MGP_BALBcJ_G0029297.1 mouse_genomes_project 5 19025177 19028677 + Armc10 protein_coding retained_intron MGP_BALBcJ_T0004763.1 MGP_BALBcJ_G0004113.1 mouse_genomes_project 5 114285339 114286558 - 4930515G01Rik antisense antisense MGP_BALBcJ_T0098960.1 MGP_BALBcJ_G0037007.1 mouse_genomes_project 5 27900789 27901234 + Gm43755 sense_intronic sense_intronic MGP_BALBcJ_T0074668.1 MGP_BALBcJ_G0030111.1 mouse_genomes_project 5 129676858 129683060 - MGP_BALBcJ_P0074668 Chchd2 protein_coding protein_coding MGP_BALBcJ_T0072321.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79134426 79510504 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072322.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79134832 79912433 + MGP_BALBcJ_P0072322 Adgrl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072323.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135012 79806375 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072324.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135015 79806372 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072325.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135256 79182018 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072326.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135459 79589994 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072327.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135462 79908777 + MGP_BALBcJ_P0072327 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072328.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135500 79912444 + MGP_BALBcJ_P0072328 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072329.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79135853 79912434 + MGP_BALBcJ_P0072329 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072330.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79136051 79318132 + Adgrl3 protein_coding processed_transcript MGP_BALBcJ_T0072331.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79136052 79912433 + Adgrl3 protein_coding processed_transcript MGP_BALBcJ_T0072332.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79136070 79689243 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072333.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438286 79911146 + MGP_BALBcJ_P0072333 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072334.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072334 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072335.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072335 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072336.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072336 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072337.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072337 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072338.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072338 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072339.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072339 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072340.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072340 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072341.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438287 79911146 + MGP_BALBcJ_P0072341 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072342.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438295 79474752 + Adgrl3 protein_coding processed_transcript MGP_BALBcJ_T0072343.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438325 79911015 + MGP_BALBcJ_P0072343 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072344.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438325 79911015 + MGP_BALBcJ_P0072344 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072345.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438325 79911015 + MGP_BALBcJ_P0072345 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072346.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438325 79911686 + MGP_BALBcJ_P0072346 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072347.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438350 79911515 + MGP_BALBcJ_P0072347 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072348.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438438 79912433 + MGP_BALBcJ_P0072348 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072349.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79438438 79912433 + MGP_BALBcJ_P0072349 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072350.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79763682 79806154 + Adgrl3 protein_coding processed_transcript MGP_BALBcJ_T0072351.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79777528 79778893 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072352.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79777887 79912433 + MGP_BALBcJ_P0072352 Adgrl3 protein_coding protein_coding MGP_BALBcJ_T0072353.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79839043 79841138 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0072354.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79887083 79940513 + Adgrl3 protein_coding processed_transcript MGP_BALBcJ_T0072355.1 MGP_BALBcJ_G0029637.1 mouse_genomes_project 5 79906977 79909394 + Adgrl3 protein_coding retained_intron MGP_BALBcJ_T0014947.1 MGP_BALBcJ_G0013044.1 mouse_genomes_project 5 48156219 48156961 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073430.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112728809 112797632 - MGP_BALBcJ_P0073430 Sgsm1 protein_coding protein_coding MGP_BALBcJ_T0073431.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112728818 112767157 - MGP_BALBcJ_P0073431 Sgsm1 protein_coding protein_coding MGP_BALBcJ_T0073432.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112743442 112767157 - Sgsm1 protein_coding processed_transcript MGP_BALBcJ_T0073433.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112744080 112797623 - Sgsm1 protein_coding processed_transcript MGP_BALBcJ_T0073434.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112752335 112797585 - MGP_BALBcJ_P0073434 Sgsm1 protein_coding protein_coding MGP_BALBcJ_T0073435.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112752948 112797543 - MGP_BALBcJ_P0073435 Sgsm1 protein_coding protein_coding MGP_BALBcJ_T0073436.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112760500 112767143 - MGP_BALBcJ_P0073436 Sgsm1 protein_coding protein_coding MGP_BALBcJ_T0073437.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112762452 112765906 - Sgsm1 protein_coding retained_intron MGP_BALBcJ_T0073438.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112766177 112769444 - Sgsm1 protein_coding retained_intron MGP_BALBcJ_T0073439.1 MGP_BALBcJ_G0029893.1 mouse_genomes_project 5 112772005 112797566 - Sgsm1 protein_coding retained_intron MGP_BALBcJ_T0001705.1 MGP_BALBcJ_G0001620.1 mouse_genomes_project 5 80234144 80235561 - TEC TEC MGP_BALBcJ_T0075186.1 MGP_BALBcJ_G0030202.1 mouse_genomes_project 5 137236874 137257517 - MGP_BALBcJ_P0075186 Slc12a9 protein_coding protein_coding MGP_BALBcJ_T0075187.1 MGP_BALBcJ_G0030202.1 mouse_genomes_project 5 137243355 137244972 - Slc12a9 protein_coding retained_intron MGP_BALBcJ_T0075188.1 MGP_BALBcJ_G0030202.1 mouse_genomes_project 5 137253187 137257517 - Slc12a9 protein_coding retained_intron MGP_BALBcJ_T0075189.1 MGP_BALBcJ_G0030202.1 mouse_genomes_project 5 137256194 137256930 - MGP_BALBcJ_P0075189 Slc12a9 protein_coding protein_coding MGP_BALBcJ_T0073173.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654508 107668629 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0073174.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654508 107677449 - MGP_BALBcJ_P0073174 Dgkq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073175.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654508 107668629 - MGP_BALBcJ_P0073175 Dgkq protein_coding protein_coding MGP_BALBcJ_T0073176.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654508 107668629 - MGP_BALBcJ_P0073176 Dgkq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073177.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654508 107668629 - MGP_BALBcJ_P0073177 Dgkq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073178.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654862 107668629 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0073179.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107654862 107661465 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0073180.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107655089 107657744 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0073181.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107658673 107661309 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0073182.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107661309 107662950 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0073183.1 MGP_BALBcJ_G0029837.1 mouse_genomes_project 5 107662360 107663814 - Dgkq protein_coding retained_intron MGP_BALBcJ_T0014867.1 MGP_BALBcJ_G0012964.1 mouse_genomes_project 5 19332946 19333588 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010666.1 MGP_BALBcJ_G0008791.1 mouse_genomes_project 5 62870175 62870253 + Mir574 miRNA miRNA MGP_BALBcJ_T0070930.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29130723 29133134 + Slc4a1ap protein_coding retained_intron MGP_BALBcJ_T0070931.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29130723 29158390 + MGP_BALBcJ_P0070931 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070932.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29130725 29138178 + Slc4a1ap protein_coding retained_intron MGP_BALBcJ_T0070933.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29130725 29158696 + MGP_BALBcJ_P0070933 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070934.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29130740 29158395 + MGP_BALBcJ_P0070934 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070935.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29130740 29140550 + MGP_BALBcJ_P0070935 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070936.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29131329 29135957 + Slc4a1ap protein_coding retained_intron MGP_BALBcJ_T0070937.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29135701 29138719 + Slc4a1ap protein_coding retained_intron MGP_BALBcJ_T0070938.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29139863 29158361 + MGP_BALBcJ_P0070938 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070939.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29147322 29158391 + Slc4a1ap protein_coding retained_intron MGP_BALBcJ_T0070940.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29147511 29158395 + MGP_BALBcJ_P0070940 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070941.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29147589 29158320 + MGP_BALBcJ_P0070941 Slc4a1ap protein_coding protein_coding MGP_BALBcJ_T0070942.1 MGP_BALBcJ_G0029406.1 mouse_genomes_project 5 29154625 29161168 + Slc4a1ap protein_coding processed_transcript MGP_BALBcJ_T0073625.1 MGP_BALBcJ_G0029929.1 mouse_genomes_project 5 114489269 114496826 + MGP_BALBcJ_P0073625 2210016L21Rik protein_coding protein_coding MGP_BALBcJ_T0073626.1 MGP_BALBcJ_G0029929.1 mouse_genomes_project 5 114489315 114493917 + 2210016L21Rik protein_coding retained_intron MGP_BALBcJ_T0073627.1 MGP_BALBcJ_G0029929.1 mouse_genomes_project 5 114489321 114493883 + MGP_BALBcJ_P0073627 2210016L21Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073628.1 MGP_BALBcJ_G0029929.1 mouse_genomes_project 5 114489342 114493254 + 2210016L21Rik protein_coding retained_intron MGP_BALBcJ_T0073629.1 MGP_BALBcJ_G0029929.1 mouse_genomes_project 5 114492841 114494827 + MGP_BALBcJ_P0073629 2210016L21Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070536.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22757055 22932089 - MGP_BALBcJ_P0070536 Kmt2c protein_coding unknown_likely_coding MGP_BALBcJ_T0070537.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22757064 22785197 - MGP_BALBcJ_P0070537 Kmt2c protein_coding protein_coding MGP_BALBcJ_T0070538.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22757692 22793672 - MGP_BALBcJ_P0070538 Kmt2c protein_coding protein_coding MGP_BALBcJ_T0070539.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22758875 22988370 - MGP_BALBcJ_P0070539 Kmt2c protein_coding protein_coding MGP_BALBcJ_T0070540.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22760917 22766515 - Kmt2c protein_coding retained_intron MGP_BALBcJ_T0070541.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22774234 22778501 - Kmt2c protein_coding retained_intron MGP_BALBcJ_T0070542.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22800842 22988327 - MGP_BALBcJ_P0070542 Kmt2c protein_coding protein_coding MGP_BALBcJ_T0070543.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22861526 22988380 - MGP_BALBcJ_P0070543 Kmt2c protein_coding protein_coding MGP_BALBcJ_T0070544.1 MGP_BALBcJ_G0029338.1 mouse_genomes_project 5 22871455 22988408 - Kmt2c protein_coding retained_intron MGP_BALBcJ_T0070668.1 MGP_BALBcJ_G0029365.1 mouse_genomes_project 5 27863304 27901439 + MGP_BALBcJ_P0070668 Drc1 protein_coding protein_coding MGP_BALBcJ_T0070669.1 MGP_BALBcJ_G0029365.1 mouse_genomes_project 5 27876290 27877279 + Drc1 protein_coding processed_transcript MGP_BALBcJ_T0070670.1 MGP_BALBcJ_G0029365.1 mouse_genomes_project 5 27880899 27890474 + Drc1 protein_coding processed_transcript MGP_BALBcJ_T0070671.1 MGP_BALBcJ_G0029365.1 mouse_genomes_project 5 27889075 27891075 + Drc1 protein_coding processed_transcript MGP_BALBcJ_T0072684.1 MGP_BALBcJ_G0029730.1 mouse_genomes_project 5 90942093 90946646 + MGP_BALBcJ_P0072684 Stbd1 protein_coding protein_coding MGP_BALBcJ_T0072685.1 MGP_BALBcJ_G0029730.1 mouse_genomes_project 5 90942103 90948406 + MGP_BALBcJ_P0072685 Stbd1 protein_coding protein_coding MGP_BALBcJ_T0072686.1 MGP_BALBcJ_G0029730.1 mouse_genomes_project 5 90942120 90948121 + MGP_BALBcJ_P0072686 Stbd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075153.1 MGP_BALBcJ_G0030197.1 mouse_genomes_project 5 137165028 137168646 - MGP_BALBcJ_P0075153 Muc3a protein_coding protein_coding MGP_BALBcJ_T0075154.1 MGP_BALBcJ_G0030197.1 mouse_genomes_project 5 137166255 137170498 - MGP_BALBcJ_P0075154 Muc3a protein_coding protein_coding MGP_BALBcJ_T0008086.1 MGP_BALBcJ_G0006588.1 mouse_genomes_project 5 36903297 36954841 - Gm43453 lincRNA lincRNA MGP_BALBcJ_T0071023.1 MGP_BALBcJ_G0029419.1 mouse_genomes_project 5 30869222 30886919 - Spon2 protein_coding retained_intron MGP_BALBcJ_T0071024.1 MGP_BALBcJ_G0029419.1 mouse_genomes_project 5 30884896 30889425 - MGP_BALBcJ_P0071024 Spon2 protein_coding protein_coding MGP_BALBcJ_T0071025.1 MGP_BALBcJ_G0029419.1 mouse_genomes_project 5 30884903 30889155 - Spon2 protein_coding retained_intron MGP_BALBcJ_T0071026.1 MGP_BALBcJ_G0029419.1 mouse_genomes_project 5 30884904 30886930 - Spon2 protein_coding retained_intron MGP_BALBcJ_T0071027.1 MGP_BALBcJ_G0029419.1 mouse_genomes_project 5 30887398 30889165 - MGP_BALBcJ_P0071027 Spon2 protein_coding protein_coding MGP_BALBcJ_T0015105.1 MGP_BALBcJ_G0013202.1 mouse_genomes_project 5 113256499 113256703 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001582.1 MGP_BALBcJ_G0001499.1 mouse_genomes_project 5 49110710 49112261 - TEC TEC MGP_BALBcJ_T0072490.1 MGP_BALBcJ_G0029683.1 mouse_genomes_project 5 86864546 86882827 + MGP_BALBcJ_P0072490 Enam protein_coding protein_coding MGP_BALBcJ_T0072491.1 MGP_BALBcJ_G0029683.1 mouse_genomes_project 5 86864553 86884146 + MGP_BALBcJ_P0072491 Enam protein_coding protein_coding MGP_BALBcJ_T0074663.1 MGP_BALBcJ_G0030110.1 mouse_genomes_project 5 129657527 129673464 - MGP_BALBcJ_P0074663 Phkg1 protein_coding protein_coding MGP_BALBcJ_T0074664.1 MGP_BALBcJ_G0030110.1 mouse_genomes_project 5 129659989 129694504 - MGP_BALBcJ_P0074664 Phkg1 protein_coding protein_coding MGP_BALBcJ_T0074665.1 MGP_BALBcJ_G0030110.1 mouse_genomes_project 5 129659994 129663234 - Phkg1 protein_coding retained_intron MGP_BALBcJ_T0074666.1 MGP_BALBcJ_G0030110.1 mouse_genomes_project 5 129663002 129665125 - Phkg1 protein_coding processed_transcript MGP_BALBcJ_T0074667.1 MGP_BALBcJ_G0030110.1 mouse_genomes_project 5 129671892 129673432 - Phkg1 protein_coding retained_intron MGP_BALBcJ_T0001557.1 MGP_BALBcJ_G0001475.1 mouse_genomes_project 5 46374274 46378073 - TEC TEC MGP_BALBcJ_T0008418.1 MGP_BALBcJ_G0006825.1 mouse_genomes_project 5 146953200 146966717 - Gm34333 lincRNA lincRNA MGP_BALBcJ_T0073096.1 MGP_BALBcJ_G0029822.1 mouse_genomes_project 5 106798400 106800078 + MGP_BALBcJ_P0073096 Ube2d2b protein_coding protein_coding MGP_BALBcJ_T0004807.1 MGP_BALBcJ_G0004143.1 mouse_genomes_project 5 123179462 123183771 - Gm15747 antisense antisense MGP_BALBcJ_T0004808.1 MGP_BALBcJ_G0004143.1 mouse_genomes_project 5 123179473 123180878 - Gm15747 antisense antisense MGP_BALBcJ_T0073707.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115077538 115127020 + MGP_BALBcJ_P0073707 Pxn protein_coding protein_coding MGP_BALBcJ_T0073708.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115077573 115127015 + Pxn protein_coding retained_intron MGP_BALBcJ_T0073709.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115077670 115126010 + MGP_BALBcJ_P0073709 Pxn protein_coding protein_coding MGP_BALBcJ_T0073710.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115077718 115120166 + MGP_BALBcJ_P0073710 Pxn protein_coding unknown_likely_coding MGP_BALBcJ_T0073711.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115087231 115115906 + Pxn protein_coding processed_transcript MGP_BALBcJ_T0073712.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115091207 115127015 + Pxn protein_coding processed_transcript MGP_BALBcJ_T0073713.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115113951 115117907 + MGP_BALBcJ_P0073713 Pxn protein_coding protein_coding MGP_BALBcJ_T0073714.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115113987 115117862 + MGP_BALBcJ_P0073714 Pxn protein_coding protein_coding MGP_BALBcJ_T0073715.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115114969 115116435 + Pxn protein_coding processed_transcript MGP_BALBcJ_T0073716.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115115107 115125533 + MGP_BALBcJ_P0073716 Pxn protein_coding protein_coding MGP_BALBcJ_T0073717.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115115136 115115971 + Pxn protein_coding retained_intron MGP_BALBcJ_T0073718.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115115818 115120783 + Pxn protein_coding retained_intron MGP_BALBcJ_T0073719.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115116326 115116798 + Pxn protein_coding retained_intron MGP_BALBcJ_T0073720.1 MGP_BALBcJ_G0029947.1 mouse_genomes_project 5 115122947 115123801 + Pxn protein_coding retained_intron MGP_BALBcJ_T0008462.1 MGP_BALBcJ_G0006857.1 mouse_genomes_project 5 151363833 151383547 - Gm43298 lincRNA lincRNA MGP_BALBcJ_T0011582.1 MGP_BALBcJ_G0009707.1 mouse_genomes_project 5 102353413 102353706 + Gm23085 misc_RNA misc_RNA MGP_BALBcJ_T0015119.1 MGP_BALBcJ_G0013216.1 mouse_genomes_project 5 116950258 116950695 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004849.1 MGP_BALBcJ_G0004173.1 mouse_genomes_project 5 139082320 139087925 + 6330403L08Rik antisense antisense MGP_BALBcJ_T0004850.1 MGP_BALBcJ_G0004173.1 mouse_genomes_project 5 139082320 139087926 + 6330403L08Rik antisense antisense MGP_BALBcJ_T0074417.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124057457 124132886 - MGP_BALBcJ_P0074417 Mphosph9 protein_coding unknown_likely_coding MGP_BALBcJ_T0074418.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124057463 124132969 - MGP_BALBcJ_P0074418 Mphosph9 protein_coding protein_coding MGP_BALBcJ_T0074419.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124059174 124132846 - MGP_BALBcJ_P0074419 Mphosph9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074420.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124060172 124132849 - MGP_BALBcJ_P0074420 Mphosph9 protein_coding protein_coding MGP_BALBcJ_T0074421.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124061122 124067608 - Mphosph9 protein_coding processed_transcript MGP_BALBcJ_T0074422.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124065497 124071830 - Mphosph9 protein_coding processed_transcript MGP_BALBcJ_T0074423.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124067444 124069523 - Mphosph9 protein_coding processed_transcript MGP_BALBcJ_T0074424.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124068455 124069894 - Mphosph9 protein_coding retained_intron MGP_BALBcJ_T0074425.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124096267 124132867 - MGP_BALBcJ_P0074425 Mphosph9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074426.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124103554 124130125 - MGP_BALBcJ_P0074426 Mphosph9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074427.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124120174 124132969 - Mphosph9 protein_coding processed_transcript MGP_BALBcJ_T0074428.1 MGP_BALBcJ_G0030067.1 mouse_genomes_project 5 124120174 124132849 - Mphosph9 protein_coding processed_transcript MGP_BALBcJ_T0072135.1 MGP_BALBcJ_G0029602.1 mouse_genomes_project 5 71374376 71419311 + MGP_BALBcJ_P0072135 Cwh43 protein_coding protein_coding MGP_BALBcJ_T0072136.1 MGP_BALBcJ_G0029602.1 mouse_genomes_project 5 71374528 71419321 + MGP_BALBcJ_P0072136 Cwh43 protein_coding protein_coding MGP_BALBcJ_T0072137.1 MGP_BALBcJ_G0029602.1 mouse_genomes_project 5 71374663 71419168 + MGP_BALBcJ_P0072137 Cwh43 protein_coding unknown_likely_coding MGP_BALBcJ_T0072138.1 MGP_BALBcJ_G0029602.1 mouse_genomes_project 5 71399228 71403366 + Cwh43 protein_coding retained_intron MGP_BALBcJ_T0073099.1 MGP_BALBcJ_G0029823.1 mouse_genomes_project 5 106887196 106897242 + MGP_BALBcJ_P0073099 Rpl5 protein_coding protein_coding MGP_BALBcJ_T0073100.1 MGP_BALBcJ_G0029823.1 mouse_genomes_project 5 106887253 106896233 + MGP_BALBcJ_P0073100 Rpl5 protein_coding protein_coding MGP_BALBcJ_T0073101.1 MGP_BALBcJ_G0029823.1 mouse_genomes_project 5 106887266 106892434 + Rpl5 protein_coding retained_intron MGP_BALBcJ_T0073102.1 MGP_BALBcJ_G0029823.1 mouse_genomes_project 5 106888816 106892196 + Rpl5 protein_coding retained_intron MGP_BALBcJ_T0073103.1 MGP_BALBcJ_G0029823.1 mouse_genomes_project 5 106892424 106896287 + Rpl5 protein_coding retained_intron MGP_BALBcJ_T0073104.1 MGP_BALBcJ_G0029823.1 mouse_genomes_project 5 106894856 106896292 + Rpl5 protein_coding retained_intron MGP_BALBcJ_T0001647.1 MGP_BALBcJ_G0001563.1 mouse_genomes_project 5 64154273 64157223 + TEC TEC MGP_BALBcJ_T0070828.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28732983 28738652 - MGP_BALBcJ_P0070828 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070829.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28732984 28738361 - MGP_BALBcJ_P0070829 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070830.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28732992 28738230 - MGP_BALBcJ_P0070830 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070831.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28732993 28738236 - MGP_BALBcJ_P0070831 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070832.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28732994 28736862 - MGP_BALBcJ_P0070832 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070833.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28734616 28736076 - Eif2b4 protein_coding retained_intron MGP_BALBcJ_T0070834.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28734783 28735131 - MGP_BALBcJ_P0070834 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070835.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28734803 28736366 - MGP_BALBcJ_P0070835 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070836.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28735612 28736414 - MGP_BALBcJ_P0070836 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0070837.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28736414 28738361 - Eif2b4 protein_coding processed_transcript MGP_BALBcJ_T0070838.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28736544 28738221 - Eif2b4 protein_coding retained_intron MGP_BALBcJ_T0070839.1 MGP_BALBcJ_G0029392.1 mouse_genomes_project 5 28736932 28738640 - MGP_BALBcJ_P0070839 Eif2b4 protein_coding protein_coding MGP_BALBcJ_T0075742.1 MGP_BALBcJ_G0030325.1 mouse_genomes_project 5 144037674 144045286 - MGP_BALBcJ_P0075742 Aimp2 protein_coding protein_coding MGP_BALBcJ_T0075743.1 MGP_BALBcJ_G0030325.1 mouse_genomes_project 5 144037674 144045278 - MGP_BALBcJ_P0075743 Aimp2 protein_coding protein_coding MGP_BALBcJ_T0075744.1 MGP_BALBcJ_G0030325.1 mouse_genomes_project 5 144041058 144045223 - Aimp2 protein_coding retained_intron MGP_BALBcJ_T0075745.1 MGP_BALBcJ_G0030325.1 mouse_genomes_project 5 144041343 144045227 - Aimp2 protein_coding retained_intron MGP_BALBcJ_T0073915.1 MGP_BALBcJ_G0029984.1 mouse_genomes_project 5 120275947 120291741 + MGP_BALBcJ_P0073915 Ddx54 protein_coding protein_coding MGP_BALBcJ_T0073916.1 MGP_BALBcJ_G0029984.1 mouse_genomes_project 5 120276335 120290776 + Ddx54 protein_coding retained_intron MGP_BALBcJ_T0073917.1 MGP_BALBcJ_G0029984.1 mouse_genomes_project 5 120282054 120284949 + Ddx54 protein_coding retained_intron MGP_BALBcJ_T0073918.1 MGP_BALBcJ_G0029984.1 mouse_genomes_project 5 120284477 120284948 + Ddx54 protein_coding retained_intron MGP_BALBcJ_T0001858.1 MGP_BALBcJ_G0001772.1 mouse_genomes_project 5 131838657 131845982 - TEC TEC MGP_BALBcJ_T0072571.1 MGP_BALBcJ_G0029704.1 mouse_genomes_project 5 89138047 89138996 + MGP_BALBcJ_P0072571 Pf4 protein_coding protein_coding MGP_BALBcJ_T0072572.1 MGP_BALBcJ_G0029704.1 mouse_genomes_project 5 89138125 89138769 + MGP_BALBcJ_P0072572 Pf4 protein_coding protein_coding MGP_BALBcJ_T0072573.1 MGP_BALBcJ_G0029704.1 mouse_genomes_project 5 89138503 89138991 + Pf4 protein_coding retained_intron MGP_BALBcJ_T0015135.1 MGP_BALBcJ_G0013232.1 mouse_genomes_project 5 133750789 133751633 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071520.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41389960 41427986 - MGP_BALBcJ_P0071520 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071521.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41389961 41427952 - MGP_BALBcJ_P0071521 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071522.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41389961 41427993 - MGP_BALBcJ_P0071522 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071523.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41389961 41419247 - MGP_BALBcJ_P0071523 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071524.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41389969 41469194 - MGP_BALBcJ_P0071524 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071525.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41395946 41427945 - MGP_BALBcJ_P0071525 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071526.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41401552 41427964 - MGP_BALBcJ_P0071526 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071527.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41403532 41427980 - MGP_BALBcJ_P0071527 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0071528.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41404337 41405532 - Fbxl5 protein_coding retained_intron MGP_BALBcJ_T0071529.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41406678 41427945 - Fbxl5 protein_coding retained_intron MGP_BALBcJ_T0071530.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41407958 41427961 - Fbxl5 protein_coding retained_intron MGP_BALBcJ_T0071531.1 MGP_BALBcJ_G0029501.1 mouse_genomes_project 5 41413753 41427943 - MGP_BALBcJ_P0071531 Fbxl5 protein_coding protein_coding MGP_BALBcJ_T0072969.1 MGP_BALBcJ_G0029798.1 mouse_genomes_project 5 103856906 104053191 - protein_coding processed_transcript MGP_BALBcJ_T0072971.1 MGP_BALBcJ_G0029798.1 mouse_genomes_project 5 104001354 104020851 - MGP_BALBcJ_P0072971 protein_coding protein_coding MGP_BALBcJ_T0072973.1 MGP_BALBcJ_G0029798.1 mouse_genomes_project 5 104002136 104020827 - MGP_BALBcJ_P0072973 protein_coding protein_coding MGP_BALBcJ_T0098975.1 MGP_BALBcJ_G0037022.1 mouse_genomes_project 5 128576596 128577626 - Gm42871 sense_intronic sense_intronic MGP_BALBcJ_T0010650.1 MGP_BALBcJ_G0008775.1 mouse_genomes_project 5 26890011 26890078 - Gm23801 miRNA miRNA MGP_BALBcJ_T0015044.1 MGP_BALBcJ_G0013141.1 mouse_genomes_project 5 88905973 88906544 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070637.1 MGP_BALBcJ_G0029360.1 mouse_genomes_project 5 27679547 27692809 + MGP_BALBcJ_P0070637 Gareml protein_coding protein_coding MGP_BALBcJ_T0070584.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743116 26750260 + MGP_BALBcJ_P0070584 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070585.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743117 26772676 + MGP_BALBcJ_P0070585 Rnf32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070586.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743119 26745872 + MGP_BALBcJ_P0070586 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070587.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743121 26772717 + MGP_BALBcJ_P0070587 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070588.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743127 26750320 + MGP_BALBcJ_P0070588 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070589.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743130 26772719 + MGP_BALBcJ_P0070589 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070590.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743182 26754776 + Rnf32 protein_coding retained_intron MGP_BALBcJ_T0070591.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743208 26745116 + Rnf32 protein_coding processed_transcript MGP_BALBcJ_T0070592.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26743711 26750209 + MGP_BALBcJ_P0070592 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070593.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26745130 26772486 + MGP_BALBcJ_P0070593 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070594.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26745795 26772496 + MGP_BALBcJ_P0070594 Rnf32 protein_coding protein_coding MGP_BALBcJ_T0070595.1 MGP_BALBcJ_G0029350.1 mouse_genomes_project 5 26770980 26775652 + Rnf32 protein_coding retained_intron MGP_BALBcJ_T0001531.1 MGP_BALBcJ_G0001449.1 mouse_genomes_project 5 41994920 41995263 + TEC TEC MGP_BALBcJ_T0073134.1 MGP_BALBcJ_G0029828.1 mouse_genomes_project 5 107264135 107275973 + MGP_BALBcJ_P0073134 Dr1 protein_coding protein_coding MGP_BALBcJ_T0073135.1 MGP_BALBcJ_G0029828.1 mouse_genomes_project 5 107272371 107274062 + Dr1 protein_coding processed_transcript MGP_BALBcJ_T0014905.1 MGP_BALBcJ_G0013002.1 mouse_genomes_project 5 27822154 27822521 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074566.1 MGP_BALBcJ_G0030092.1 mouse_genomes_project 5 127027826 127349862 + MGP_BALBcJ_P0074566 Tmem132c protein_coding protein_coding MGP_BALBcJ_T0074567.1 MGP_BALBcJ_G0030092.1 mouse_genomes_project 5 127027844 127067842 + Tmem132c protein_coding processed_transcript MGP_BALBcJ_T0074568.1 MGP_BALBcJ_G0030092.1 mouse_genomes_project 5 127333023 127348935 + Tmem132c protein_coding processed_transcript MGP_BALBcJ_T0074569.1 MGP_BALBcJ_G0030092.1 mouse_genomes_project 5 127334774 127348555 + MGP_BALBcJ_P0074569 Tmem132c protein_coding protein_coding MGP_BALBcJ_T0008323.1 MGP_BALBcJ_G0006763.1 mouse_genomes_project 5 119480087 119483559 - Gm43050 lincRNA lincRNA MGP_BALBcJ_T0008324.1 MGP_BALBcJ_G0006763.1 mouse_genomes_project 5 119482668 119483430 - Gm43050 lincRNA lincRNA MGP_BALBcJ_T0004755.1 MGP_BALBcJ_G0004108.1 mouse_genomes_project 5 111838943 111842214 - Gm20636 antisense antisense MGP_BALBcJ_T0004658.1 MGP_BALBcJ_G0004035.1 mouse_genomes_project 5 36405050 36417754 + Clnkos antisense antisense MGP_BALBcJ_T0004659.1 MGP_BALBcJ_G0004035.1 mouse_genomes_project 5 36405051 36417754 + Clnkos antisense antisense MGP_BALBcJ_T0075591.1 MGP_BALBcJ_G0030291.1 mouse_genomes_project 5 140835789 140850051 + MGP_BALBcJ_P0075591 Brat1 protein_coding protein_coding MGP_BALBcJ_T0075592.1 MGP_BALBcJ_G0030291.1 mouse_genomes_project 5 140835801 140850002 + MGP_BALBcJ_P0075592 Brat1 protein_coding protein_coding MGP_BALBcJ_T0075593.1 MGP_BALBcJ_G0030291.1 mouse_genomes_project 5 140835801 140849845 + MGP_BALBcJ_P0075593 Brat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075594.1 MGP_BALBcJ_G0030291.1 mouse_genomes_project 5 140835828 140846607 + Brat1 protein_coding retained_intron MGP_BALBcJ_T0075595.1 MGP_BALBcJ_G0030291.1 mouse_genomes_project 5 140835830 140846331 + Brat1 protein_coding retained_intron MGP_BALBcJ_T0075596.1 MGP_BALBcJ_G0030291.1 mouse_genomes_project 5 140835844 140850051 + MGP_BALBcJ_P0075596 Brat1 protein_coding protein_coding MGP_BALBcJ_T0071639.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063962 46416915 - Kcnip4 protein_coding processed_transcript MGP_BALBcJ_T0071640.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063962 46269519 - MGP_BALBcJ_P0071640 Kcnip4 protein_coding protein_coding MGP_BALBcJ_T0071641.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063962 47203014 - MGP_BALBcJ_P0071641 Kcnip4 protein_coding protein_coding MGP_BALBcJ_T0071642.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063962 46558265 - MGP_BALBcJ_P0071642 Kcnip4 protein_coding protein_coding MGP_BALBcJ_T0071643.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063963 46165361 - Kcnip4 protein_coding processed_transcript MGP_BALBcJ_T0071644.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063967 47202871 - MGP_BALBcJ_P0071644 Kcnip4 protein_coding protein_coding MGP_BALBcJ_T0071645.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46063972 46953802 - MGP_BALBcJ_P0071645 Kcnip4 protein_coding protein_coding MGP_BALBcJ_T0071648.1 MGP_BALBcJ_G0029517.1 mouse_genomes_project 5 46070494 46416915 - Kcnip4 protein_coding processed_transcript MGP_BALBcJ_T0070768.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28590982 28595465 + MGP_BALBcJ_P0070768 Atraid protein_coding protein_coding MGP_BALBcJ_T0070769.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28590991 28597309 + Atraid protein_coding retained_intron MGP_BALBcJ_T0070770.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28591305 28597315 + MGP_BALBcJ_P0070770 Atraid protein_coding protein_coding MGP_BALBcJ_T0070771.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28591317 28597059 + MGP_BALBcJ_P0070771 Atraid protein_coding protein_coding MGP_BALBcJ_T0070772.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28591318 28596685 + MGP_BALBcJ_P0070772 Atraid protein_coding protein_coding MGP_BALBcJ_T0070773.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28591329 28597310 + MGP_BALBcJ_P0070773 Atraid protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070774.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28591392 28597036 + MGP_BALBcJ_P0070774 Atraid protein_coding protein_coding MGP_BALBcJ_T0070775.1 MGP_BALBcJ_G0029383.1 mouse_genomes_project 5 28596561 28597315 + Atraid protein_coding processed_transcript MGP_BALBcJ_T0004672.1 MGP_BALBcJ_G0004043.1 mouse_genomes_project 5 43070854 43090973 + Gm42413 antisense antisense MGP_BALBcJ_T0075920.1 MGP_BALBcJ_G0030364.1 mouse_genomes_project 5 147324771 147336949 - MGP_BALBcJ_P0075920 Mtif3 protein_coding protein_coding MGP_BALBcJ_T0075921.1 MGP_BALBcJ_G0030364.1 mouse_genomes_project 5 147327719 147336951 - MGP_BALBcJ_P0075921 Mtif3 protein_coding protein_coding MGP_BALBcJ_T0075922.1 MGP_BALBcJ_G0030364.1 mouse_genomes_project 5 147328566 147336961 - MGP_BALBcJ_P0075922 Mtif3 protein_coding protein_coding MGP_BALBcJ_T0075923.1 MGP_BALBcJ_G0030364.1 mouse_genomes_project 5 147328566 147336913 - MGP_BALBcJ_P0075923 Mtif3 protein_coding protein_coding MGP_BALBcJ_T0075924.1 MGP_BALBcJ_G0030364.1 mouse_genomes_project 5 147332093 147336907 - MGP_BALBcJ_P0075924 Mtif3 protein_coding protein_coding MGP_BALBcJ_T0075925.1 MGP_BALBcJ_G0030364.1 mouse_genomes_project 5 147332104 147336964 - MGP_BALBcJ_P0075925 Mtif3 protein_coding protein_coding MGP_BALBcJ_T0004800.1 MGP_BALBcJ_G0004139.1 mouse_genomes_project 5 122757341 122766486 + A930024E05Rik antisense antisense MGP_BALBcJ_T0004676.1 MGP_BALBcJ_G0004045.1 mouse_genomes_project 5 45665802 45668445 - 4930518C09Rik antisense antisense MGP_BALBcJ_T0015043.1 MGP_BALBcJ_G0013140.1 mouse_genomes_project 5 88491467 88491914 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001457.1 MGP_BALBcJ_G0001378.1 mouse_genomes_project 5 11944361 11949024 + TEC TEC MGP_BALBcJ_T0014968.1 MGP_BALBcJ_G0013065.1 mouse_genomes_project 5 57842217 57842651 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074147.1 MGP_BALBcJ_G0030028.1 mouse_genomes_project 5 122177436 122201317 + MGP_BALBcJ_P0074147 Anapc7 protein_coding protein_coding MGP_BALBcJ_T0074148.1 MGP_BALBcJ_G0030028.1 mouse_genomes_project 5 122178187 122201317 + MGP_BALBcJ_P0074148 Anapc7 protein_coding protein_coding MGP_BALBcJ_T0074149.1 MGP_BALBcJ_G0030028.1 mouse_genomes_project 5 122178224 122199839 + MGP_BALBcJ_P0074149 Anapc7 protein_coding protein_coding MGP_BALBcJ_T0074150.1 MGP_BALBcJ_G0030028.1 mouse_genomes_project 5 122195778 122196890 + Anapc7 protein_coding retained_intron MGP_BALBcJ_T0074151.1 MGP_BALBcJ_G0030028.1 mouse_genomes_project 5 122196543 122198208 + Anapc7 protein_coding retained_intron MGP_BALBcJ_T0074152.1 MGP_BALBcJ_G0030028.1 mouse_genomes_project 5 122197779 122198187 + MGP_BALBcJ_P0074152 Anapc7 protein_coding protein_coding MGP_BALBcJ_T0011573.1 MGP_BALBcJ_G0009698.1 mouse_genomes_project 5 36993617 36993863 + Gm25505 misc_RNA misc_RNA MGP_BALBcJ_T0099928.1 MGP_BALBcJ_G0037964.1 mouse_genomes_project 5 67670470 67670596 - Gm26044 snRNA snRNA MGP_BALBcJ_T0070221.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13301950 13743844 + MGP_BALBcJ_P0070221 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070222.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302047 13740402 + MGP_BALBcJ_P0070222 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070223.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302047 13740402 + MGP_BALBcJ_P0070223 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070224.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302047 13740402 + MGP_BALBcJ_P0070224 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070225.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302047 13740384 + MGP_BALBcJ_P0070225 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070226.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302047 13743837 + MGP_BALBcJ_P0070226 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070227.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302088 13740060 + MGP_BALBcJ_P0070227 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070228.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13302170 13454736 + MGP_BALBcJ_P0070228 Cacna2d1 protein_coding protein_coding MGP_BALBcJ_T0070229.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13393790 13642927 + Cacna2d1 protein_coding retained_intron MGP_BALBcJ_T0070230.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13694969 13698694 + Cacna2d1 protein_coding retained_intron MGP_BALBcJ_T0070231.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13695129 13709948 + Cacna2d1 protein_coding retained_intron MGP_BALBcJ_T0070232.1 MGP_BALBcJ_G0029278.1 mouse_genomes_project 5 13730721 13731653 + Cacna2d1 protein_coding retained_intron MGP_BALBcJ_T0075207.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137458670 137462129 - MGP_BALBcJ_P0075207 Gnb2 protein_coding protein_coding MGP_BALBcJ_T0075208.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137458672 137459465 - Gnb2 protein_coding retained_intron MGP_BALBcJ_T0075209.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137458701 137462387 - MGP_BALBcJ_P0075209 Gnb2 protein_coding protein_coding MGP_BALBcJ_T0075210.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459047 137463812 - MGP_BALBcJ_P0075210 Gnb2 protein_coding protein_coding MGP_BALBcJ_T0075211.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459109 137461444 - Gnb2 protein_coding retained_intron MGP_BALBcJ_T0075212.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459316 137460407 - Gnb2 protein_coding retained_intron MGP_BALBcJ_T0075213.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459340 137460365 - Gnb2 protein_coding retained_intron MGP_BALBcJ_T0075214.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459417 137460321 - Gnb2 protein_coding retained_intron MGP_BALBcJ_T0075215.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459564 137461583 - MGP_BALBcJ_P0075215 Gnb2 protein_coding protein_coding MGP_BALBcJ_T0075216.1 MGP_BALBcJ_G0030208.1 mouse_genomes_project 5 137459682 137462581 - MGP_BALBcJ_P0075216 Gnb2 protein_coding protein_coding MGP_BALBcJ_T0102561.1 MGP_BALBcJ_G0040377.1 mouse_genomes_project 5 14583672 14587915 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0072561.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88952795 88996888 - MGP_BALBcJ_P0072561 Rassf6 protein_coding protein_coding MGP_BALBcJ_T0072562.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88952795 88996888 - MGP_BALBcJ_P0072562 Rassf6 protein_coding protein_coding MGP_BALBcJ_T0072563.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88953342 88959549 - MGP_BALBcJ_P0072563 Rassf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072564.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88953550 88997055 - MGP_BALBcJ_P0072564 Rassf6 protein_coding protein_coding MGP_BALBcJ_T0072565.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88967350 88997026 - MGP_BALBcJ_P0072565 Rassf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072566.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88971887 88996925 - MGP_BALBcJ_P0072566 Rassf6 protein_coding protein_coding MGP_BALBcJ_T0072567.1 MGP_BALBcJ_G0029701.1 mouse_genomes_project 5 88994872 88997053 - Rassf6 protein_coding processed_transcript MGP_BALBcJ_T0072722.1 MGP_BALBcJ_G0029738.1 mouse_genomes_project 5 94617897 94622015 + MGP_BALBcJ_P0072722 Cxcl13 protein_coding protein_coding MGP_BALBcJ_T0008436.1 MGP_BALBcJ_G0006841.1 mouse_genomes_project 5 149568712 149638194 - 5730422E09Rik lincRNA lincRNA MGP_BALBcJ_T0008437.1 MGP_BALBcJ_G0006841.1 mouse_genomes_project 5 149568716 149572556 - 5730422E09Rik lincRNA lincRNA MGP_BALBcJ_T0015080.1 MGP_BALBcJ_G0013177.1 mouse_genomes_project 5 106213717 106214462 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098969.1 MGP_BALBcJ_G0037016.1 mouse_genomes_project 5 99545827 99546252 - Gm43514 sense_intronic sense_intronic MGP_BALBcJ_T0015190.1 MGP_BALBcJ_G0013287.1 mouse_genomes_project 5 148592098 148594847 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076011.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149492397 149499595 - MGP_BALBcJ_P0076011 Hmgb1 protein_coding protein_coding MGP_BALBcJ_T0076012.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149492463 149639735 - MGP_BALBcJ_P0076012 Hmgb1 protein_coding protein_coding MGP_BALBcJ_T0076013.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149492780 149494075 - Hmgb1 protein_coding retained_intron MGP_BALBcJ_T0076014.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149493028 149499692 - MGP_BALBcJ_P0076014 Hmgb1 protein_coding protein_coding MGP_BALBcJ_T0076015.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149493451 149495775 - MGP_BALBcJ_P0076015 Hmgb1 protein_coding protein_coding MGP_BALBcJ_T0076016.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149493695 149499697 - Hmgb1 protein_coding retained_intron MGP_BALBcJ_T0076017.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149493942 149500196 - MGP_BALBcJ_P0076017 Hmgb1 protein_coding protein_coding MGP_BALBcJ_T0076018.1 MGP_BALBcJ_G0030381.1 mouse_genomes_project 5 149494000 149499662 - Hmgb1 protein_coding retained_intron MGP_BALBcJ_T0008016.1 MGP_BALBcJ_G0006544.1 mouse_genomes_project 5 6286414 6288215 - Gm15734 lincRNA lincRNA MGP_BALBcJ_T0072574.1 MGP_BALBcJ_G0029705.1 mouse_genomes_project 5 89151708 89157549 + Cxcl3 protein_coding retained_intron MGP_BALBcJ_T0072575.1 MGP_BALBcJ_G0029705.1 mouse_genomes_project 5 89151708 89156042 + MGP_BALBcJ_P0072575 Cxcl3 protein_coding protein_coding MGP_BALBcJ_T0014952.1 MGP_BALBcJ_G0013049.1 mouse_genomes_project 5 52254858 52265344 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008288.1 MGP_BALBcJ_G0006737.1 mouse_genomes_project 5 114057182 114059910 + Gm13790 lincRNA lincRNA MGP_BALBcJ_T0101207.1 MGP_BALBcJ_G0039243.1 mouse_genomes_project 5 76864936 76865072 + Gm25756 snoRNA snoRNA MGP_BALBcJ_T0073049.1 MGP_BALBcJ_G0029812.1 mouse_genomes_project 5 106373160 106384004 + MGP_BALBcJ_P0073049 Ephx4 protein_coding protein_coding MGP_BALBcJ_T0073050.1 MGP_BALBcJ_G0029812.1 mouse_genomes_project 5 106373920 106400376 + MGP_BALBcJ_P0073050 Ephx4 protein_coding protein_coding MGP_BALBcJ_T0073051.1 MGP_BALBcJ_G0029812.1 mouse_genomes_project 5 106374199 106383912 + MGP_BALBcJ_P0073051 Ephx4 protein_coding protein_coding MGP_BALBcJ_T0073052.1 MGP_BALBcJ_G0029812.1 mouse_genomes_project 5 106376194 106383972 + MGP_BALBcJ_P0073052 Ephx4 protein_coding protein_coding MGP_BALBcJ_T0001536.1 MGP_BALBcJ_G0001454.1 mouse_genomes_project 5 42277537 42281324 - TEC TEC MGP_BALBcJ_T0071567.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42119807 42455324 - MGP_BALBcJ_P0071567 Ldb2 protein_coding protein_coding MGP_BALBcJ_T0071568.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42119807 42455365 - MGP_BALBcJ_P0071568 Ldb2 protein_coding protein_coding MGP_BALBcJ_T0071569.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42119807 42455304 - MGP_BALBcJ_P0071569 Ldb2 protein_coding protein_coding MGP_BALBcJ_T0071570.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42119815 42455287 - MGP_BALBcJ_P0071570 Ldb2 protein_coding protein_coding MGP_BALBcJ_T0071571.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42126929 42247577 - Ldb2 protein_coding processed_transcript MGP_BALBcJ_T0071572.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42179465 42187911 - Ldb2 protein_coding processed_transcript MGP_BALBcJ_T0071573.1 MGP_BALBcJ_G0029507.1 mouse_genomes_project 5 42194436 42455337 - Ldb2 protein_coding retained_intron MGP_BALBcJ_T0073769.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115597344 115608081 - MGP_BALBcJ_P0073769 Prkab1 protein_coding protein_coding MGP_BALBcJ_T0073770.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115597348 115608127 - MGP_BALBcJ_P0073770 Prkab1 protein_coding protein_coding MGP_BALBcJ_T0073771.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115597925 115598920 - Prkab1 protein_coding retained_intron MGP_BALBcJ_T0073772.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115598074 115601828 - Prkab1 protein_coding retained_intron MGP_BALBcJ_T0073773.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115598193 115607975 - MGP_BALBcJ_P0073773 Prkab1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073774.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115598408 115608070 - MGP_BALBcJ_P0073774 Prkab1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073775.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115601431 115608016 - Prkab1 protein_coding retained_intron MGP_BALBcJ_T0073776.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115603324 115605264 - Prkab1 protein_coding retained_intron MGP_BALBcJ_T0073777.1 MGP_BALBcJ_G0029953.1 mouse_genomes_project 5 115607516 115608078 - Prkab1 protein_coding retained_intron MGP_BALBcJ_T0072752.1 MGP_BALBcJ_G0029744.1 mouse_genomes_project 5 95740911 95770157 - MGP_BALBcJ_P0072752 Paqr3 protein_coding protein_coding MGP_BALBcJ_T0072753.1 MGP_BALBcJ_G0029744.1 mouse_genomes_project 5 95745574 95770134 - MGP_BALBcJ_P0072753 Paqr3 protein_coding protein_coding MGP_BALBcJ_T0072754.1 MGP_BALBcJ_G0029744.1 mouse_genomes_project 5 95754516 95756356 - Paqr3 protein_coding retained_intron MGP_BALBcJ_T0072755.1 MGP_BALBcJ_G0029744.1 mouse_genomes_project 5 95756108 95770004 - MGP_BALBcJ_P0072755 Paqr3 protein_coding protein_coding MGP_BALBcJ_T0072756.1 MGP_BALBcJ_G0029744.1 mouse_genomes_project 5 95760716 95770157 - MGP_BALBcJ_P0072756 Paqr3 protein_coding protein_coding MGP_BALBcJ_T0072757.1 MGP_BALBcJ_G0029744.1 mouse_genomes_project 5 95763154 95770145 - Paqr3 protein_coding retained_intron MGP_BALBcJ_T0008172.1 MGP_BALBcJ_G0006657.1 mouse_genomes_project 5 84908362 84998076 + Gm43055 lincRNA lincRNA MGP_BALBcJ_T0001853.1 MGP_BALBcJ_G0001767.1 mouse_genomes_project 5 131755512 131757710 - TEC TEC MGP_BALBcJ_T0001602.1 MGP_BALBcJ_G0001519.1 mouse_genomes_project 5 55512639 55515240 + TEC TEC MGP_BALBcJ_T0071028.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30918574 30946221 - MGP_BALBcJ_P0071028 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071029.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30918605 30946219 - MGP_BALBcJ_P0071029 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071030.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30918876 30946208 - MGP_BALBcJ_P0071030 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071031.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30919019 30920102 - Ctbp1 protein_coding retained_intron MGP_BALBcJ_T0071032.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30919112 30920405 - Ctbp1 protein_coding retained_intron MGP_BALBcJ_T0071033.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30919351 30946197 - MGP_BALBcJ_P0071033 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071034.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30921234 30940715 - MGP_BALBcJ_P0071034 Ctbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071035.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30921709 30946206 - MGP_BALBcJ_P0071035 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071036.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30930152 30940863 - MGP_BALBcJ_P0071036 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071037.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30931494 30940751 - Ctbp1 protein_coding retained_intron MGP_BALBcJ_T0071038.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30931911 30945806 - MGP_BALBcJ_P0071038 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0071039.1 MGP_BALBcJ_G0029420.1 mouse_genomes_project 5 30938174 30945817 - MGP_BALBcJ_P0071039 Ctbp1 protein_coding protein_coding MGP_BALBcJ_T0074032.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121402126 121429506 + MGP_BALBcJ_P0074032 Brap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074033.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121402153 121405541 + Brap protein_coding retained_intron MGP_BALBcJ_T0074034.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121402319 121429512 + MGP_BALBcJ_P0074034 Brap protein_coding protein_coding MGP_BALBcJ_T0074035.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121403602 121417887 + MGP_BALBcJ_P0074035 Brap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074036.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121403611 121407541 + MGP_BALBcJ_P0074036 Brap protein_coding protein_coding MGP_BALBcJ_T0074037.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121403641 121405273 + Brap protein_coding retained_intron MGP_BALBcJ_T0074038.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121408429 121429511 + Brap protein_coding processed_transcript MGP_BALBcJ_T0074039.1 MGP_BALBcJ_G0030012.1 mouse_genomes_project 5 121425175 121429508 + Brap protein_coding retained_intron MGP_BALBcJ_T0008412.1 MGP_BALBcJ_G0006821.1 mouse_genomes_project 5 143958726 143966246 + D130017N08Rik lincRNA lincRNA MGP_BALBcJ_T0008413.1 MGP_BALBcJ_G0006821.1 mouse_genomes_project 5 143960233 143967586 + D130017N08Rik lincRNA lincRNA MGP_BALBcJ_T0008415.1 MGP_BALBcJ_G0006821.1 mouse_genomes_project 5 143966746 143969026 + D130017N08Rik lincRNA lincRNA MGP_BALBcJ_T0011813.1 MGP_BALBcJ_G0009914.1 mouse_genomes_project 5 120479124 120481077 + Oas1b polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0011814.1 MGP_BALBcJ_G0009914.1 mouse_genomes_project 5 120479127 120490656 + MGP_BALBcJ_P0011814 Oas1b polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0073944.1 MGP_BALBcJ_G0009914.1 mouse_genomes_project 5 120479346 120487803 + MGP_BALBcJ_P0073944 Oas1b polymorphic_pseudogene unknown_likely_coding MGP_BALBcJ_T0001659.1 MGP_BALBcJ_G0001575.1 mouse_genomes_project 5 65072974 65077795 + TEC TEC MGP_BALBcJ_T0015007.1 MGP_BALBcJ_G0013104.1 mouse_genomes_project 5 73217043 73217371 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004787.1 MGP_BALBcJ_G0004127.1 mouse_genomes_project 5 119768957 119787129 - Gm10390 antisense antisense MGP_BALBcJ_T0004788.1 MGP_BALBcJ_G0004127.1 mouse_genomes_project 5 119779352 119787131 - Gm10390 antisense antisense MGP_BALBcJ_T0001882.1 MGP_BALBcJ_G0001795.1 mouse_genomes_project 5 137261559 137262508 + TEC TEC MGP_BALBcJ_T0075342.1 MGP_BALBcJ_G0030237.1 mouse_genomes_project 5 138114210 138129647 - MGP_BALBcJ_P0075342 Zfp113 protein_coding protein_coding MGP_BALBcJ_T0075343.1 MGP_BALBcJ_G0030237.1 mouse_genomes_project 5 138119169 138126802 - MGP_BALBcJ_P0075343 Zfp113 protein_coding protein_coding MGP_BALBcJ_T0075344.1 MGP_BALBcJ_G0030237.1 mouse_genomes_project 5 138123555 138129603 - Zfp113 protein_coding retained_intron MGP_BALBcJ_T0075345.1 MGP_BALBcJ_G0030237.1 mouse_genomes_project 5 138123963 138129607 - MGP_BALBcJ_P0075345 Zfp113 protein_coding protein_coding MGP_BALBcJ_T0075995.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148921181 148969126 - MGP_BALBcJ_P0075995 Ubl3 protein_coding protein_coding MGP_BALBcJ_T0075996.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148921675 148969253 - MGP_BALBcJ_P0075996 Ubl3 protein_coding protein_coding MGP_BALBcJ_T0075997.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148921688 148969253 - MGP_BALBcJ_P0075997 Ubl3 protein_coding protein_coding MGP_BALBcJ_T0075998.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148922527 148954043 - Ubl3 protein_coding processed_transcript MGP_BALBcJ_T0075999.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148925811 148968114 - Ubl3 protein_coding processed_transcript MGP_BALBcJ_T0076000.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148925821 148968106 - Ubl3 protein_coding processed_transcript MGP_BALBcJ_T0076001.1 MGP_BALBcJ_G0030378.1 mouse_genomes_project 5 148963025 148969162 - Ubl3 protein_coding retained_intron MGP_BALBcJ_T0074040.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121456008 121498528 + Atxn2 protein_coding processed_transcript MGP_BALBcJ_T0074041.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121456201 121565987 + MGP_BALBcJ_P0074041 Atxn2 protein_coding protein_coding MGP_BALBcJ_T0074042.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121458620 121523906 + Atxn2 protein_coding processed_transcript MGP_BALBcJ_T0074043.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121498540 121565986 + MGP_BALBcJ_P0074043 Atxn2 protein_coding protein_coding MGP_BALBcJ_T0074044.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121529043 121546101 + MGP_BALBcJ_P0074044 Atxn2 protein_coding protein_coding MGP_BALBcJ_T0074045.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121531304 121534428 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074046.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121535012 121565758 + MGP_BALBcJ_P0074046 Atxn2 protein_coding protein_coding MGP_BALBcJ_T0074047.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121536179 121546512 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074048.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121548452 121554473 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074049.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121552358 121553303 + Atxn2 protein_coding processed_transcript MGP_BALBcJ_T0074050.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121552783 121561989 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074051.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121553148 121560094 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074052.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121553267 121565669 + MGP_BALBcJ_P0074052 Atxn2 protein_coding protein_coding MGP_BALBcJ_T0074053.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121556616 121565771 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074054.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121557282 121564493 + MGP_BALBcJ_P0074054 Atxn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074055.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121561701 121562571 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074056.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121562002 121562968 + Atxn2 protein_coding retained_intron MGP_BALBcJ_T0074057.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121562497 121567530 + MGP_BALBcJ_P0074057 Atxn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074058.1 MGP_BALBcJ_G0030013.1 mouse_genomes_project 5 121562544 121565935 + MGP_BALBcJ_P0074058 Atxn2 protein_coding protein_coding MGP_BALBcJ_T0014897.1 MGP_BALBcJ_G0012994.1 mouse_genomes_project 5 25355583 25356565 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098989.1 MGP_BALBcJ_G0037032.1 mouse_genomes_project 5 150505235 150505500 + Gm42558 sense_intronic sense_intronic MGP_BALBcJ_T0008367.1 MGP_BALBcJ_G0006788.1 mouse_genomes_project 5 126949245 126967577 + 4930572K03Rik lincRNA lincRNA MGP_BALBcJ_T0008368.1 MGP_BALBcJ_G0006788.1 mouse_genomes_project 5 126949250 126967591 + 4930572K03Rik lincRNA lincRNA MGP_BALBcJ_T0014989.1 MGP_BALBcJ_G0013086.1 mouse_genomes_project 5 64298997 64299265 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098379.1 MGP_BALBcJ_G0036433.1 mouse_genomes_project 5 135549163 135549545 - pseudogene pseudogene MGP_BALBcJ_T0008157.1 MGP_BALBcJ_G0006646.1 mouse_genomes_project 5 74029753 74043708 + Gm32780 lincRNA lincRNA MGP_BALBcJ_T0008056.1 MGP_BALBcJ_G0006571.1 mouse_genomes_project 5 27557298 27569276 - Gm42806 lincRNA lincRNA MGP_BALBcJ_T0008057.1 MGP_BALBcJ_G0006571.1 mouse_genomes_project 5 27565071 27568292 - Gm42806 lincRNA lincRNA MGP_BALBcJ_T0102578.1 MGP_BALBcJ_G0040394.1 mouse_genomes_project 5 108750520 108752730 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0070760.1 MGP_BALBcJ_G0029381.1 mouse_genomes_project 5 28510792 28519140 + MGP_BALBcJ_P0070760 Tcf23 protein_coding protein_coding MGP_BALBcJ_T0008348.1 MGP_BALBcJ_G0006778.1 mouse_genomes_project 5 125702275 125726074 + 1700048F04Rik lincRNA lincRNA MGP_BALBcJ_T0070438.1 MGP_BALBcJ_G0029319.1 mouse_genomes_project 5 21904136 21909426 - MGP_BALBcJ_P0070438 Cdk5 protein_coding protein_coding MGP_BALBcJ_T0070439.1 MGP_BALBcJ_G0029319.1 mouse_genomes_project 5 21905271 21909381 - MGP_BALBcJ_P0070439 Cdk5 protein_coding protein_coding MGP_BALBcJ_T0070440.1 MGP_BALBcJ_G0029319.1 mouse_genomes_project 5 21906894 21908591 - Cdk5 protein_coding retained_intron MGP_BALBcJ_T0004621.1 MGP_BALBcJ_G0004003.1 mouse_genomes_project 5 13361814 13365697 - Gm43000 antisense antisense MGP_BALBcJ_T0008306.1 MGP_BALBcJ_G0006749.1 mouse_genomes_project 5 116413414 116416224 + Gm29926 lincRNA lincRNA MGP_BALBcJ_T0098618.1 MGP_BALBcJ_G0036672.1 mouse_genomes_project 5 118929592 118929709 + n-R5s175 rRNA rRNA MGP_BALBcJ_T0071706.1 MGP_BALBcJ_G0029529.1 mouse_genomes_project 5 50783585 50895777 - MGP_BALBcJ_P0071706 Sel1l3 protein_coding protein_coding MGP_BALBcJ_T0071707.1 MGP_BALBcJ_G0029529.1 mouse_genomes_project 5 50821546 50895624 - Sel1l3 protein_coding retained_intron MGP_BALBcJ_T0071708.1 MGP_BALBcJ_G0029529.1 mouse_genomes_project 5 50832967 50836340 - Sel1l3 protein_coding retained_intron MGP_BALBcJ_T0071709.1 MGP_BALBcJ_G0029529.1 mouse_genomes_project 5 50835254 50852746 - Sel1l3 protein_coding processed_transcript MGP_BALBcJ_T0071710.1 MGP_BALBcJ_G0029529.1 mouse_genomes_project 5 50880096 50896135 - Sel1l3 protein_coding retained_intron MGP_BALBcJ_T0001786.1 MGP_BALBcJ_G0001701.1 mouse_genomes_project 5 118269674 118274634 + TEC TEC MGP_BALBcJ_T0071462.1 MGP_BALBcJ_G0029488.1 mouse_genomes_project 5 35992615 35995768 + MGP_BALBcJ_P0071462 Drd5 protein_coding protein_coding MGP_BALBcJ_T0008319.1 MGP_BALBcJ_G0006760.1 mouse_genomes_project 5 119285324 119301365 + Gm16064 lincRNA lincRNA MGP_BALBcJ_T0010711.1 MGP_BALBcJ_G0008836.1 mouse_genomes_project 5 137460024 137460139 - Mir6418 miRNA miRNA MGP_BALBcJ_T0001788.1 MGP_BALBcJ_G0001703.1 mouse_genomes_project 5 118332820 118335513 + TEC TEC MGP_BALBcJ_T0004710.1 MGP_BALBcJ_G0004075.1 mouse_genomes_project 5 84908355 84939290 + Gm16579 antisense antisense MGP_BALBcJ_T0004626.1 MGP_BALBcJ_G0004007.1 mouse_genomes_project 5 19712082 19713759 + Gm16110 antisense antisense MGP_BALBcJ_T0008398.1 MGP_BALBcJ_G0006808.1 mouse_genomes_project 5 137440868 137448046 + Gm8066 lincRNA lincRNA MGP_BALBcJ_T0073207.1 MGP_BALBcJ_G0029845.1 mouse_genomes_project 5 108178412 108193930 - MGP_BALBcJ_P0073207 protein_coding protein_coding MGP_BALBcJ_T0001431.1 MGP_BALBcJ_G0001352.1 mouse_genomes_project 5 678841 685686 - TEC TEC MGP_BALBcJ_T0001635.1 MGP_BALBcJ_G0001551.1 mouse_genomes_project 5 63539896 63543110 + TEC TEC MGP_BALBcJ_T0071795.1 MGP_BALBcJ_G0029547.1 mouse_genomes_project 5 62869928 62943875 + MGP_BALBcJ_P0071795 Fam114a1 protein_coding protein_coding MGP_BALBcJ_T0071796.1 MGP_BALBcJ_G0029547.1 mouse_genomes_project 5 62872766 62906930 + MGP_BALBcJ_P0071796 Fam114a1 protein_coding protein_coding MGP_BALBcJ_T0075272.1 MGP_BALBcJ_G0030217.1 mouse_genomes_project 5 137583160 137587712 - MGP_BALBcJ_P0075272 Irs3 protein_coding protein_coding MGP_BALBcJ_T0075273.1 MGP_BALBcJ_G0030217.1 mouse_genomes_project 5 137583161 137587889 - MGP_BALBcJ_P0075273 Irs3 protein_coding protein_coding MGP_BALBcJ_T0014927.1 MGP_BALBcJ_G0013024.1 mouse_genomes_project 5 36170204 36170408 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015072.1 MGP_BALBcJ_G0013169.1 mouse_genomes_project 5 103832068 103832350 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001828.1 MGP_BALBcJ_G0001742.1 mouse_genomes_project 5 127401253 127402027 + TEC TEC MGP_BALBcJ_T0004750.1 MGP_BALBcJ_G0004103.1 mouse_genomes_project 5 109710803 109723543 + Gm15788 antisense antisense MGP_BALBcJ_T0072666.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90767720 90788988 - MGP_BALBcJ_P0072666 protein_coding unknown_likely_coding MGP_BALBcJ_T0072667.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90768362 90788988 - MGP_BALBcJ_P0072667 protein_coding unknown_likely_coding MGP_BALBcJ_T0072668.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90768952 90770691 - protein_coding retained_intron MGP_BALBcJ_T0072669.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90775685 90777840 - protein_coding retained_intron MGP_BALBcJ_T0072670.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90778658 90788465 - protein_coding processed_transcript MGP_BALBcJ_T0072671.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90780933 90789009 - protein_coding retained_intron MGP_BALBcJ_T0072672.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90781204 90789032 - MGP_BALBcJ_P0072672 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072673.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90784098 90789041 - MGP_BALBcJ_P0072673 protein_coding protein_coding MGP_BALBcJ_T0072674.1 MGP_BALBcJ_G0029727.1 mouse_genomes_project 5 90784106 90788675 - MGP_BALBcJ_P0072674 protein_coding protein_coding MGP_BALBcJ_T0015027.1 MGP_BALBcJ_G0013124.1 mouse_genomes_project 5 85149292 85150885 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008207.1 MGP_BALBcJ_G0006687.1 mouse_genomes_project 5 99140468 99150798 - 5430416N02Rik lincRNA lincRNA MGP_BALBcJ_T0008208.1 MGP_BALBcJ_G0006687.1 mouse_genomes_project 5 99143276 99150779 - 5430416N02Rik lincRNA lincRNA MGP_BALBcJ_T0008209.1 MGP_BALBcJ_G0006687.1 mouse_genomes_project 5 99149998 99150638 - 5430416N02Rik lincRNA lincRNA MGP_BALBcJ_T0008210.1 MGP_BALBcJ_G0006687.1 mouse_genomes_project 5 99150256 99150778 - 5430416N02Rik lincRNA lincRNA MGP_BALBcJ_T0075404.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138343713 138354225 + MGP_BALBcJ_P0075404 Stag3 protein_coding protein_coding MGP_BALBcJ_T0075405.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138343982 138376157 + Stag3 protein_coding retained_intron MGP_BALBcJ_T0075406.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138343999 138376154 + Stag3 protein_coding retained_intron MGP_BALBcJ_T0075407.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138343999 138376157 + MGP_BALBcJ_P0075407 Stag3 protein_coding protein_coding MGP_BALBcJ_T0075408.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138344017 138376157 + MGP_BALBcJ_P0075408 Stag3 protein_coding protein_coding MGP_BALBcJ_T0075409.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138344029 138353880 + MGP_BALBcJ_P0075409 Stag3 protein_coding protein_coding MGP_BALBcJ_T0075410.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138362655 138364921 + Stag3 protein_coding processed_transcript MGP_BALBcJ_T0075411.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138367896 138372704 + MGP_BALBcJ_P0075411 Stag3 protein_coding protein_coding MGP_BALBcJ_T0075412.1 MGP_BALBcJ_G0030250.1 mouse_genomes_project 5 138372658 138376150 + MGP_BALBcJ_P0075412 Stag3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071741.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55506215 55928366 + MGP_BALBcJ_P0071741 Pcdh7 protein_coding protein_coding MGP_BALBcJ_T0071742.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55506268 55517743 + MGP_BALBcJ_P0071742 Pcdh7 protein_coding protein_coding MGP_BALBcJ_T0071743.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55507346 55924479 + MGP_BALBcJ_P0071743 Pcdh7 protein_coding protein_coding MGP_BALBcJ_T0071744.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55508372 55706267 + MGP_BALBcJ_P0071744 Pcdh7 protein_coding protein_coding MGP_BALBcJ_T0071745.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55509411 55924925 + MGP_BALBcJ_P0071745 Pcdh7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071746.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55510162 55703503 + MGP_BALBcJ_P0071746 Pcdh7 protein_coding protein_coding MGP_BALBcJ_T0071747.1 MGP_BALBcJ_G0029535.1 mouse_genomes_project 5 55510458 55924582 + MGP_BALBcJ_P0071747 Pcdh7 protein_coding protein_coding MGP_BALBcJ_T0075630.1 MGP_BALBcJ_G0030301.1 mouse_genomes_project 5 142792368 142795161 + Wipi2 protein_coding retained_intron MGP_BALBcJ_T0075631.1 MGP_BALBcJ_G0030301.1 mouse_genomes_project 5 142794212 142835737 + MGP_BALBcJ_P0075631 Wipi2 protein_coding protein_coding MGP_BALBcJ_T0075632.1 MGP_BALBcJ_G0030301.1 mouse_genomes_project 5 142794261 142827858 + Wipi2 protein_coding retained_intron MGP_BALBcJ_T0075633.1 MGP_BALBcJ_G0030301.1 mouse_genomes_project 5 142794263 142832636 + MGP_BALBcJ_P0075633 Wipi2 protein_coding protein_coding MGP_BALBcJ_T0075634.1 MGP_BALBcJ_G0030301.1 mouse_genomes_project 5 142827662 142829793 + Wipi2 protein_coding retained_intron MGP_BALBcJ_T0070068.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2589114 2681124 - MGP_BALBcJ_P0070068 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070069.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2589118 2681093 - MGP_BALBcJ_P0070069 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070070.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2590818 2631350 - Cfap69 protein_coding processed_transcript MGP_BALBcJ_T0070071.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2590874 2592338 - MGP_BALBcJ_P0070071 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070072.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2590964 2597048 - MGP_BALBcJ_P0070072 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070073.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2591007 2625578 - MGP_BALBcJ_P0070073 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070074.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2596192 2680928 - MGP_BALBcJ_P0070074 Cfap69 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070075.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2599011 2681093 - MGP_BALBcJ_P0070075 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070076.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2603482 2681117 - MGP_BALBcJ_P0070076 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0070077.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2634887 2635261 - Cfap69 protein_coding retained_intron MGP_BALBcJ_T0070078.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2659315 2681112 - Cfap69 protein_coding retained_intron MGP_BALBcJ_T0070079.1 MGP_BALBcJ_G0029255.1 mouse_genomes_project 5 2662293 2680005 - MGP_BALBcJ_P0070079 Cfap69 protein_coding protein_coding MGP_BALBcJ_T0099915.1 MGP_BALBcJ_G0037951.1 mouse_genomes_project 5 31856254 31856357 + Gm25918 snRNA snRNA MGP_BALBcJ_T0001772.1 MGP_BALBcJ_G0001687.1 mouse_genomes_project 5 114990709 114992973 - TEC TEC MGP_BALBcJ_T0074598.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128794568 128818558 - MGP_BALBcJ_P0074598 Stx2 protein_coding protein_coding MGP_BALBcJ_T0074599.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128794574 128818519 - MGP_BALBcJ_P0074599 Stx2 protein_coding protein_coding MGP_BALBcJ_T0074600.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128796124 128799140 - Stx2 protein_coding retained_intron MGP_BALBcJ_T0074601.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128798646 128799831 - Stx2 protein_coding retained_intron MGP_BALBcJ_T0074602.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128798889 128818407 - Stx2 protein_coding processed_transcript MGP_BALBcJ_T0074603.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128800623 128818533 - Stx2 protein_coding retained_intron MGP_BALBcJ_T0074604.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128803477 128818428 - MGP_BALBcJ_P0074604 Stx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074605.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128803491 128809604 - MGP_BALBcJ_P0074605 Stx2 protein_coding protein_coding MGP_BALBcJ_T0074606.1 MGP_BALBcJ_G0030099.1 mouse_genomes_project 5 128809056 128818530 - Stx2 protein_coding retained_intron MGP_BALBcJ_T0001814.1 MGP_BALBcJ_G0001729.1 mouse_genomes_project 5 123347696 123348159 - TEC TEC MGP_BALBcJ_T0001818.1 MGP_BALBcJ_G0001733.1 mouse_genomes_project 5 124083679 124085285 - TEC TEC MGP_BALBcJ_T0075731.1 MGP_BALBcJ_G0030322.1 mouse_genomes_project 5 143910458 143932256 - MGP_BALBcJ_P0075731 Usp42 protein_coding protein_coding MGP_BALBcJ_T0075732.1 MGP_BALBcJ_G0030322.1 mouse_genomes_project 5 143913885 143915746 - Usp42 protein_coding processed_transcript MGP_BALBcJ_T0075733.1 MGP_BALBcJ_G0030322.1 mouse_genomes_project 5 143913900 143917320 - Usp42 protein_coding retained_intron MGP_BALBcJ_T0075734.1 MGP_BALBcJ_G0030322.1 mouse_genomes_project 5 143916536 143928157 - Usp42 protein_coding retained_intron MGP_BALBcJ_T0075735.1 MGP_BALBcJ_G0030322.1 mouse_genomes_project 5 143921785 143923078 - Usp42 protein_coding retained_intron MGP_BALBcJ_T0075789.1 MGP_BALBcJ_G0030335.1 mouse_genomes_project 5 144442789 144537715 - MGP_BALBcJ_P0075789 Baiap2l1 protein_coding protein_coding MGP_BALBcJ_T0075790.1 MGP_BALBcJ_G0030335.1 mouse_genomes_project 5 144460695 144467607 - Baiap2l1 protein_coding processed_transcript MGP_BALBcJ_T0073006.1 MGP_BALBcJ_G0029806.1 mouse_genomes_project 5 105568426 105568530 + MGP_BALBcJ_P0073006 Gm17304 protein_coding protein_coding MGP_BALBcJ_T0008095.1 MGP_BALBcJ_G0006595.1 mouse_genomes_project 5 40993457 40995654 - Gm43020 lincRNA lincRNA MGP_BALBcJ_T0015120.1 MGP_BALBcJ_G0013217.1 mouse_genomes_project 5 120304760 120304971 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004622.1 MGP_BALBcJ_G0004004.1 mouse_genomes_project 5 16573096 16597040 - 4921504A21Rik antisense antisense MGP_BALBcJ_T0004623.1 MGP_BALBcJ_G0004004.1 mouse_genomes_project 5 16574021 16596653 - 4921504A21Rik antisense antisense MGP_BALBcJ_T0004670.1 MGP_BALBcJ_G0004042.1 mouse_genomes_project 5 42295053 42314117 + Gm43507 antisense antisense MGP_BALBcJ_T0004671.1 MGP_BALBcJ_G0004042.1 mouse_genomes_project 5 42305179 42315528 + Gm43507 antisense antisense MGP_BALBcJ_T0075978.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148364561 148730844 + MGP_BALBcJ_P0075978 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0075979.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148364583 148487645 + MGP_BALBcJ_P0075979 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0075980.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148493966 148640232 + Mtus2 protein_coding retained_intron MGP_BALBcJ_T0075981.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148505555 148614494 + Mtus2 protein_coding processed_transcript MGP_BALBcJ_T0075982.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148611567 148730841 + MGP_BALBcJ_P0075982 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0075983.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148642558 148645739 + Mtus2 protein_coding retained_intron MGP_BALBcJ_T0075984.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148671126 148728850 + MGP_BALBcJ_P0075984 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0075985.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148671201 148728331 + MGP_BALBcJ_P0075985 Mtus2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075986.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148671254 148728817 + MGP_BALBcJ_P0075986 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0075987.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148718103 148728239 + MGP_BALBcJ_P0075987 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0075988.1 MGP_BALBcJ_G0030376.1 mouse_genomes_project 5 148718112 148728779 + MGP_BALBcJ_P0075988 Mtus2 protein_coding protein_coding MGP_BALBcJ_T0004822.1 MGP_BALBcJ_G0004152.1 mouse_genomes_project 5 128131906 128137908 + Gm42817 antisense antisense MGP_BALBcJ_T0101199.1 MGP_BALBcJ_G0039235.1 mouse_genomes_project 5 59993587 59993719 - Gm22273 snoRNA snoRNA MGP_BALBcJ_T0015142.1 MGP_BALBcJ_G0013239.1 mouse_genomes_project 5 136826324 136826720 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074847.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134463740 134486468 - MGP_BALBcJ_P0074847 Lat2 protein_coding protein_coding MGP_BALBcJ_T0074848.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134463821 134486433 - MGP_BALBcJ_P0074848 Lat2 protein_coding protein_coding MGP_BALBcJ_T0074849.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134463956 134472686 - MGP_BALBcJ_P0074849 Lat2 protein_coding protein_coding MGP_BALBcJ_T0074850.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134464149 134470038 - MGP_BALBcJ_P0074850 Lat2 protein_coding protein_coding MGP_BALBcJ_T0074851.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134464287 134469483 - Lat2 protein_coding processed_transcript MGP_BALBcJ_T0074852.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134464516 134486449 - MGP_BALBcJ_P0074852 Lat2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074853.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134464529 134467599 - Lat2 protein_coding retained_intron MGP_BALBcJ_T0074854.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134468443 134486428 - Lat2 protein_coding processed_transcript MGP_BALBcJ_T0074855.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134469612 134486409 - MGP_BALBcJ_P0074855 Lat2 protein_coding protein_coding MGP_BALBcJ_T0074856.1 MGP_BALBcJ_G0030138.1 mouse_genomes_project 5 134469717 134471841 - Lat2 protein_coding retained_intron MGP_BALBcJ_T0008387.1 MGP_BALBcJ_G0006800.1 mouse_genomes_project 5 133927661 133928458 - Gm15627 lincRNA lincRNA MGP_BALBcJ_T0001613.1 MGP_BALBcJ_G0001530.1 mouse_genomes_project 5 55840228 55841970 + TEC TEC MGP_BALBcJ_T0072002.1 MGP_BALBcJ_G0029576.1 mouse_genomes_project 5 65862189 65898854 + MGP_BALBcJ_P0072002 Gm5108 protein_coding protein_coding MGP_BALBcJ_T0072003.1 MGP_BALBcJ_G0029576.1 mouse_genomes_project 5 65862259 65898784 + Gm5108 protein_coding antisense MGP_BALBcJ_T0072004.1 MGP_BALBcJ_G0029576.1 mouse_genomes_project 5 65862259 65898789 + Gm5108 protein_coding antisense MGP_BALBcJ_T0072809.1 MGP_BALBcJ_G0029760.1 mouse_genomes_project 5 98784656 98863543 - MGP_BALBcJ_P0072809 Tmem150c protein_coding protein_coding MGP_BALBcJ_T0072810.1 MGP_BALBcJ_G0029760.1 mouse_genomes_project 5 98790823 98863169 - Tmem150c protein_coding retained_intron MGP_BALBcJ_T0072811.1 MGP_BALBcJ_G0029760.1 mouse_genomes_project 5 98790824 98830386 - Tmem150c protein_coding retained_intron MGP_BALBcJ_T0072812.1 MGP_BALBcJ_G0029760.1 mouse_genomes_project 5 98792883 98863305 - Tmem150c protein_coding retained_intron MGP_BALBcJ_T0072813.1 MGP_BALBcJ_G0029760.1 mouse_genomes_project 5 98793004 98863018 - MGP_BALBcJ_P0072813 Tmem150c protein_coding protein_coding MGP_BALBcJ_T0008045.1 MGP_BALBcJ_G0006565.1 mouse_genomes_project 5 23155865 23157324 + Gm43972 lincRNA lincRNA MGP_BALBcJ_T0073673.1 MGP_BALBcJ_G0029939.1 mouse_genomes_project 5 114841498 114859235 + MGP_BALBcJ_P0073673 Coq5 protein_coding protein_coding MGP_BALBcJ_T0073674.1 MGP_BALBcJ_G0029939.1 mouse_genomes_project 5 114841527 114842745 + Coq5 protein_coding retained_intron MGP_BALBcJ_T0073675.1 MGP_BALBcJ_G0029939.1 mouse_genomes_project 5 114846126 114858572 + MGP_BALBcJ_P0073675 Coq5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074727.1 MGP_BALBcJ_G0030124.1 mouse_genomes_project 5 130183358 130657010 + MGP_BALBcJ_P0074727 Caln1 protein_coding protein_coding MGP_BALBcJ_T0074730.1 MGP_BALBcJ_G0030124.1 mouse_genomes_project 5 130198764 130324045 + MGP_BALBcJ_P0074730 Caln1 protein_coding protein_coding MGP_BALBcJ_T0074731.1 MGP_BALBcJ_G0030124.1 mouse_genomes_project 5 130263872 130436390 + MGP_BALBcJ_P0074731 Caln1 protein_coding protein_coding MGP_BALBcJ_T0074732.1 MGP_BALBcJ_G0030124.1 mouse_genomes_project 5 130264435 130657472 + MGP_BALBcJ_P0074732 Caln1 protein_coding protein_coding MGP_BALBcJ_T0074733.1 MGP_BALBcJ_G0030124.1 mouse_genomes_project 5 130265224 130664598 + MGP_BALBcJ_P0074733 Caln1 protein_coding protein_coding MGP_BALBcJ_T0074334.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123519638 123544678 - MGP_BALBcJ_P0074334 Rsrc2 protein_coding protein_coding MGP_BALBcJ_T0074335.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123519940 123538151 - Rsrc2 protein_coding processed_transcript MGP_BALBcJ_T0074336.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123520223 123544725 - MGP_BALBcJ_P0074336 Rsrc2 protein_coding protein_coding MGP_BALBcJ_T0074337.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123520234 123544691 - MGP_BALBcJ_P0074337 Rsrc2 protein_coding protein_coding MGP_BALBcJ_T0074338.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123520300 123538176 - MGP_BALBcJ_P0074338 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074339.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123520300 123538966 - MGP_BALBcJ_P0074339 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074340.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123520300 123538966 - MGP_BALBcJ_P0074340 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074341.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123520463 123528199 - Rsrc2 protein_coding retained_intron MGP_BALBcJ_T0074342.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123521793 123544697 - MGP_BALBcJ_P0074342 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074343.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123527873 123544723 - MGP_BALBcJ_P0074343 Rsrc2 protein_coding protein_coding MGP_BALBcJ_T0074344.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123528107 123544692 - MGP_BALBcJ_P0074344 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074345.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123528107 123544693 - MGP_BALBcJ_P0074345 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074346.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123529338 123540897 - Rsrc2 protein_coding retained_intron MGP_BALBcJ_T0074347.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123529393 123536737 - Rsrc2 protein_coding retained_intron MGP_BALBcJ_T0074348.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123531122 123544682 - MGP_BALBcJ_P0074348 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074349.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123531169 123544723 - MGP_BALBcJ_P0074349 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074350.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123534177 123544680 - MGP_BALBcJ_P0074350 Rsrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074351.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123535812 123544678 - Rsrc2 protein_coding processed_transcript MGP_BALBcJ_T0074352.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123536934 123544692 - Rsrc2 protein_coding retained_intron MGP_BALBcJ_T0074353.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123536936 123544692 - Rsrc2 protein_coding retained_intron MGP_BALBcJ_T0074354.1 MGP_BALBcJ_G0030054.1 mouse_genomes_project 5 123538889 123540558 - Rsrc2 protein_coding retained_intron MGP_BALBcJ_T0071071.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31340992 31355181 + MGP_BALBcJ_P0071071 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0071072.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31340992 31362441 + MGP_BALBcJ_P0071072 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0071073.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31341011 31347680 + MGP_BALBcJ_P0071073 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0071074.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31341418 31347334 + MGP_BALBcJ_P0071074 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0071075.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31341450 31355178 + MGP_BALBcJ_P0071075 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0071076.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31341498 31345281 + Tacc3 protein_coding retained_intron MGP_BALBcJ_T0071077.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31351680 31355181 + MGP_BALBcJ_P0071077 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0071078.1 MGP_BALBcJ_G0029428.1 mouse_genomes_project 5 31351743 31362431 + MGP_BALBcJ_P0071078 Tacc3 protein_coding protein_coding MGP_BALBcJ_T0008135.1 MGP_BALBcJ_G0006629.1 mouse_genomes_project 5 65303950 65309341 + Gm43698 lincRNA lincRNA MGP_BALBcJ_T0008136.1 MGP_BALBcJ_G0006629.1 mouse_genomes_project 5 65309068 65310162 + Gm43698 lincRNA lincRNA MGP_BALBcJ_T0015001.1 MGP_BALBcJ_G0013098.1 mouse_genomes_project 5 70656732 70657042 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070583.1 MGP_BALBcJ_G0029349.1 mouse_genomes_project 5 26024711 26035135 - MGP_BALBcJ_P0070583 Shh protein_coding protein_coding MGP_BALBcJ_T0004709.1 MGP_BALBcJ_G0004074.1 mouse_genomes_project 5 79907707 79914225 - Gm16054 antisense antisense MGP_BALBcJ_T0101190.1 MGP_BALBcJ_G0039226.1 mouse_genomes_project 5 34349617 34349741 + snoRNA snoRNA MGP_BALBcJ_T0075969.1 MGP_BALBcJ_G0030374.1 mouse_genomes_project 5 148261593 148263788 + Pomp protein_coding retained_intron MGP_BALBcJ_T0075970.1 MGP_BALBcJ_G0030374.1 mouse_genomes_project 5 148261609 148274011 + MGP_BALBcJ_P0075970 Pomp protein_coding protein_coding MGP_BALBcJ_T0075971.1 MGP_BALBcJ_G0030374.1 mouse_genomes_project 5 148261645 148276479 + MGP_BALBcJ_P0075971 Pomp protein_coding protein_coding MGP_BALBcJ_T0075972.1 MGP_BALBcJ_G0030374.1 mouse_genomes_project 5 148271332 148276559 + Pomp protein_coding processed_transcript MGP_BALBcJ_T0075973.1 MGP_BALBcJ_G0030374.1 mouse_genomes_project 5 148273381 148276517 + Pomp protein_coding retained_intron MGP_BALBcJ_T0073939.1 MGP_BALBcJ_G0029990.1 mouse_genomes_project 5 120451584 120460989 - MGP_BALBcJ_P0073939 Oas1e protein_coding protein_coding MGP_BALBcJ_T0073940.1 MGP_BALBcJ_G0029990.1 mouse_genomes_project 5 120454202 120460971 - MGP_BALBcJ_P0073940 Oas1e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074915.1 MGP_BALBcJ_G0030151.1 mouse_genomes_project 5 134955034 134960401 - MGP_BALBcJ_P0074915 Vps37d protein_coding protein_coding MGP_BALBcJ_T0074916.1 MGP_BALBcJ_G0030151.1 mouse_genomes_project 5 134955037 134960401 - MGP_BALBcJ_P0074916 Vps37d protein_coding protein_coding MGP_BALBcJ_T0014911.1 MGP_BALBcJ_G0013008.1 mouse_genomes_project 5 30506596 30506882 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099942.1 MGP_BALBcJ_G0037978.1 mouse_genomes_project 5 84260902 84261072 + Gm24524 snRNA snRNA MGP_BALBcJ_T0072120.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260750 71281701 + MGP_BALBcJ_P0072120 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072121.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260758 71281813 + MGP_BALBcJ_P0072121 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072122.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260759 71277338 + MGP_BALBcJ_P0072122 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072123.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260773 71274755 + MGP_BALBcJ_P0072123 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072124.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260798 71281658 + MGP_BALBcJ_P0072124 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072125.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260807 71278389 + MGP_BALBcJ_P0072125 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072126.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71260861 71281685 + MGP_BALBcJ_P0072126 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072127.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71261019 71262953 + MGP_BALBcJ_P0072127 Ociad1 protein_coding protein_coding MGP_BALBcJ_T0072128.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71262976 71281685 + MGP_BALBcJ_P0072128 Ociad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072129.1 MGP_BALBcJ_G0029600.1 mouse_genomes_project 5 71272097 71273130 + Ociad1 protein_coding retained_intron MGP_BALBcJ_T0015147.1 MGP_BALBcJ_G0013244.1 mouse_genomes_project 5 137843338 137843726 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004651.1 MGP_BALBcJ_G0004028.1 mouse_genomes_project 5 32732517 32734093 - Gm43791 antisense antisense MGP_BALBcJ_T0075826.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145325700 145341404 + MGP_BALBcJ_P0075826 Arpc1b protein_coding protein_coding MGP_BALBcJ_T0075827.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145325743 145334506 + Arpc1b protein_coding processed_transcript MGP_BALBcJ_T0075828.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145325786 145335966 + Arpc1b protein_coding retained_intron MGP_BALBcJ_T0075829.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145325797 145339779 + MGP_BALBcJ_P0075829 Arpc1b protein_coding protein_coding MGP_BALBcJ_T0075830.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145325801 145334346 + MGP_BALBcJ_P0075830 Arpc1b protein_coding protein_coding MGP_BALBcJ_T0075831.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145335389 145338497 + MGP_BALBcJ_P0075831 Arpc1b protein_coding protein_coding MGP_BALBcJ_T0075832.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145335684 145337417 + Arpc1b protein_coding retained_intron MGP_BALBcJ_T0075833.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145335684 145338643 + Arpc1b protein_coding processed_transcript MGP_BALBcJ_T0075834.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145337601 145339041 + Arpc1b protein_coding retained_intron MGP_BALBcJ_T0075835.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145338468 145342411 + MGP_BALBcJ_P0075835 Arpc1b protein_coding protein_coding MGP_BALBcJ_T0075836.1 MGP_BALBcJ_G0030342.1 mouse_genomes_project 5 145338933 145339793 + Arpc1b protein_coding retained_intron MGP_BALBcJ_T0001800.1 MGP_BALBcJ_G0001715.1 mouse_genomes_project 5 121488807 121495421 + TEC TEC MGP_BALBcJ_T0071336.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34193659 34279721 - MGP_BALBcJ_P0071336 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071337.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34193659 34287793 - MGP_BALBcJ_P0071337 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071338.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34193659 34287199 - MGP_BALBcJ_P0071338 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071339.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34193660 34235527 - MGP_BALBcJ_P0071339 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071340.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34193663 34236506 - MGP_BALBcJ_P0071340 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071341.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34193663 34287188 - MGP_BALBcJ_P0071341 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071342.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34197339 34211949 - MGP_BALBcJ_P0071342 Tbc1d14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071343.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34197457 34291649 - MGP_BALBcJ_P0071343 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071344.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34197459 34291641 - MGP_BALBcJ_P0071344 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071345.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34197464 34198147 - Tbc1d14 protein_coding processed_transcript MGP_BALBcJ_T0071346.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34197664 34276889 - MGP_BALBcJ_P0071346 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071347.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34197732 34235452 - MGP_BALBcJ_P0071347 Tbc1d14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071348.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34199894 34225000 - Tbc1d14 protein_coding retained_intron MGP_BALBcJ_T0071349.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34223810 34235423 - MGP_BALBcJ_P0071349 Tbc1d14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071350.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34229454 34235411 - Tbc1d14 protein_coding processed_transcript MGP_BALBcJ_T0071351.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34246420 34287786 - Tbc1d14 protein_coding retained_intron MGP_BALBcJ_T0071352.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34248310 34268242 - Tbc1d14 protein_coding processed_transcript MGP_BALBcJ_T0071353.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34248372 34278889 - MGP_BALBcJ_P0071353 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071354.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34275352 34291608 - Tbc1d14 protein_coding retained_intron MGP_BALBcJ_T0071355.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34276888 34291608 - MGP_BALBcJ_P0071355 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071356.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34276937 34278660 - MGP_BALBcJ_P0071356 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071357.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34277132 34298636 - MGP_BALBcJ_P0071357 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0071358.1 MGP_BALBcJ_G0029468.1 mouse_genomes_project 5 34277360 34298661 - MGP_BALBcJ_P0071358 Tbc1d14 protein_coding protein_coding MGP_BALBcJ_T0008450.1 MGP_BALBcJ_G0006848.1 mouse_genomes_project 5 150113968 150120487 + Gm43153 lincRNA lincRNA MGP_BALBcJ_T0074555.1 MGP_BALBcJ_G0030089.1 mouse_genomes_project 5 125208022 125227579 + MGP_BALBcJ_P0074555 Bri3bp protein_coding protein_coding MGP_BALBcJ_T0074556.1 MGP_BALBcJ_G0030089.1 mouse_genomes_project 5 125208204 125221924 + MGP_BALBcJ_P0074556 Bri3bp protein_coding protein_coding MGP_BALBcJ_T0001721.1 MGP_BALBcJ_G0001636.1 mouse_genomes_project 5 95596740 95597225 + TEC TEC MGP_BALBcJ_T0015173.1 MGP_BALBcJ_G0013270.1 mouse_genomes_project 5 145627963 145628549 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001556.1 MGP_BALBcJ_G0001474.1 mouse_genomes_project 5 46294026 46296511 - TEC TEC MGP_BALBcJ_T0001692.1 MGP_BALBcJ_G0001607.1 mouse_genomes_project 5 72221103 72221569 - TEC TEC MGP_BALBcJ_T0101188.1 MGP_BALBcJ_G0039224.1 mouse_genomes_project 5 19737629 19737743 - Gm25459 snoRNA snoRNA MGP_BALBcJ_T0075165.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137217989 137230001 - MGP_BALBcJ_P0075165 Srrt protein_coding protein_coding MGP_BALBcJ_T0075166.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137217996 137229993 - MGP_BALBcJ_P0075166 Srrt protein_coding protein_coding MGP_BALBcJ_T0075167.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218000 137229993 - MGP_BALBcJ_P0075167 Srrt protein_coding protein_coding MGP_BALBcJ_T0075168.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218002 137229721 - MGP_BALBcJ_P0075168 Srrt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075169.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218010 137221931 - MGP_BALBcJ_P0075169 Srrt protein_coding protein_coding MGP_BALBcJ_T0075170.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218272 137219711 - MGP_BALBcJ_P0075170 Srrt protein_coding protein_coding MGP_BALBcJ_T0075171.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218303 137219220 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075172.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218521 137219503 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075173.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218564 137219139 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075174.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137218752 137219853 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075175.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137219909 137220833 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075176.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137220117 137222295 - MGP_BALBcJ_P0075176 Srrt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075177.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137220117 137222604 - MGP_BALBcJ_P0075177 Srrt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075178.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137220544 137222172 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075179.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137221871 137229773 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075180.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137222158 137223017 - Srrt protein_coding retained_intron MGP_BALBcJ_T0075181.1 MGP_BALBcJ_G0030200.1 mouse_genomes_project 5 137224939 137229967 - MGP_BALBcJ_P0075181 Srrt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073450.1 MGP_BALBcJ_G0029896.1 mouse_genomes_project 5 113174305 113206396 - MGP_BALBcJ_P0073450 1700069L16Rik protein_coding protein_coding MGP_BALBcJ_T0073451.1 MGP_BALBcJ_G0029896.1 mouse_genomes_project 5 113182156 113186274 - 1700069L16Rik protein_coding processed_transcript MGP_BALBcJ_T0073452.1 MGP_BALBcJ_G0029896.1 mouse_genomes_project 5 113185523 113206373 - MGP_BALBcJ_P0073452 1700069L16Rik protein_coding protein_coding MGP_BALBcJ_T0008117.1 MGP_BALBcJ_G0006615.1 mouse_genomes_project 5 56239248 56249884 - 4930459L07Rik lincRNA lincRNA MGP_BALBcJ_T0073947.1 MGP_BALBcJ_G0029993.1 mouse_genomes_project 5 120529646 120541714 + MGP_BALBcJ_P0073947 Oas1h protein_coding protein_coding MGP_BALBcJ_T0073948.1 MGP_BALBcJ_G0029993.1 mouse_genomes_project 5 120529663 120541349 + MGP_BALBcJ_P0073948 Oas1h protein_coding protein_coding MGP_BALBcJ_T0008188.1 MGP_BALBcJ_G0006673.1 mouse_genomes_project 5 95653373 95654532 - Gm9484 lincRNA lincRNA MGP_BALBcJ_T0070919.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29097578 29116105 + MGP_BALBcJ_P0070919 Gpn1 protein_coding protein_coding MGP_BALBcJ_T0070920.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29097589 29106230 + Gpn1 protein_coding retained_intron MGP_BALBcJ_T0070921.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29097590 29100554 + MGP_BALBcJ_P0070921 Gpn1 protein_coding protein_coding MGP_BALBcJ_T0070922.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29097604 29102488 + MGP_BALBcJ_P0070922 Gpn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070923.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29097631 29106736 + Gpn1 protein_coding retained_intron MGP_BALBcJ_T0070924.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29097838 29100162 + Gpn1 protein_coding processed_transcript MGP_BALBcJ_T0070925.1 MGP_BALBcJ_G0029404.1 mouse_genomes_project 5 29110261 29114060 + Gpn1 protein_coding retained_intron MGP_BALBcJ_T0070097.1 MGP_BALBcJ_G0029260.1 mouse_genomes_project 5 4977534 4997242 + MGP_BALBcJ_P0070097 Steap4 protein_coding protein_coding MGP_BALBcJ_T0004814.1 MGP_BALBcJ_G0004147.1 mouse_genomes_project 5 124476102 124479184 - 4930404A12Rik antisense antisense MGP_BALBcJ_T0004815.1 MGP_BALBcJ_G0004147.1 mouse_genomes_project 5 124476103 124479184 - 4930404A12Rik antisense antisense MGP_BALBcJ_T0101208.1 MGP_BALBcJ_G0039244.1 mouse_genomes_project 5 81787964 81788096 - Gm25765 snoRNA snoRNA MGP_BALBcJ_T0008402.1 MGP_BALBcJ_G0006812.1 mouse_genomes_project 5 139628587 139646052 + 4930500L23Rik lincRNA lincRNA MGP_BALBcJ_T0071297.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33397803 33429922 - MGP_BALBcJ_P0071297 Sh3tc1 protein_coding protein_coding MGP_BALBcJ_T0071298.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33397804 33424592 - MGP_BALBcJ_P0071298 Sh3tc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071299.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33397806 33416897 - MGP_BALBcJ_P0071299 Sh3tc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071300.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33397806 33440633 - MGP_BALBcJ_P0071300 Sh3tc1 protein_coding protein_coding MGP_BALBcJ_T0071301.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33397808 33419884 - Sh3tc1 protein_coding retained_intron MGP_BALBcJ_T0071302.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33397934 33424689 - MGP_BALBcJ_P0071302 Sh3tc1 protein_coding protein_coding MGP_BALBcJ_T0071303.1 MGP_BALBcJ_G0029460.1 mouse_genomes_project 5 33423713 33429658 - Sh3tc1 protein_coding processed_transcript MGP_BALBcJ_T0071496.1 MGP_BALBcJ_G0029494.1 mouse_genomes_project 5 39287357 39375611 - MGP_BALBcJ_P0071496 Rab28 protein_coding protein_coding MGP_BALBcJ_T0071497.1 MGP_BALBcJ_G0029494.1 mouse_genomes_project 5 39287357 39375644 - MGP_BALBcJ_P0071497 Rab28 protein_coding protein_coding MGP_BALBcJ_T0071498.1 MGP_BALBcJ_G0029494.1 mouse_genomes_project 5 39287358 39375647 - MGP_BALBcJ_P0071498 Rab28 protein_coding protein_coding MGP_BALBcJ_T0071499.1 MGP_BALBcJ_G0029494.1 mouse_genomes_project 5 39288114 39289882 - Rab28 protein_coding retained_intron MGP_BALBcJ_T0071500.1 MGP_BALBcJ_G0029494.1 mouse_genomes_project 5 39288606 39291497 - Rab28 protein_coding retained_intron MGP_BALBcJ_T0072251.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74655378 74657222 + MGP_BALBcJ_P0072251 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072252.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74656549 74842599 + MGP_BALBcJ_P0072252 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072253.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74656551 74657975 + C530008M17Rik protein_coding processed_transcript MGP_BALBcJ_T0072254.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74656587 74790024 + C530008M17Rik protein_coding processed_transcript MGP_BALBcJ_T0072255.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74751900 74875993 + MGP_BALBcJ_P0072255 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072256.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74811216 74844307 + MGP_BALBcJ_P0072256 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072257.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74842316 74876208 + MGP_BALBcJ_P0072257 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072258.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74842316 74876217 + MGP_BALBcJ_P0072258 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072259.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74842336 74844309 + MGP_BALBcJ_P0072259 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072260.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74861192 74869156 + C530008M17Rik protein_coding retained_intron MGP_BALBcJ_T0072261.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74868765 74871082 + MGP_BALBcJ_P0072261 C530008M17Rik protein_coding protein_coding MGP_BALBcJ_T0072262.1 MGP_BALBcJ_G0029624.1 mouse_genomes_project 5 74871852 74873337 + C530008M17Rik protein_coding processed_transcript MGP_BALBcJ_T0076027.1 MGP_BALBcJ_G0030383.1 mouse_genomes_project 5 149720635 149745641 + MGP_BALBcJ_P0076027 Alox5ap protein_coding protein_coding MGP_BALBcJ_T0076028.1 MGP_BALBcJ_G0030383.1 mouse_genomes_project 5 149736602 149745341 + MGP_BALBcJ_P0076028 Alox5ap protein_coding protein_coding MGP_BALBcJ_T0076029.1 MGP_BALBcJ_G0030383.1 mouse_genomes_project 5 149745005 149745635 + Alox5ap protein_coding processed_transcript MGP_BALBcJ_T0001639.1 MGP_BALBcJ_G0001555.1 mouse_genomes_project 5 63782343 63783967 + TEC TEC MGP_BALBcJ_T0001832.1 MGP_BALBcJ_G0001746.1 mouse_genomes_project 5 128398379 128399756 - TEC TEC MGP_BALBcJ_T0015087.1 MGP_BALBcJ_G0013184.1 mouse_genomes_project 5 107139783 107140368 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008340.1 MGP_BALBcJ_G0006771.1 mouse_genomes_project 5 122906758 122909381 + 4932422M17Rik lincRNA lincRNA MGP_BALBcJ_T0015140.1 MGP_BALBcJ_G0013237.1 mouse_genomes_project 5 135808097 135808254 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001598.1 MGP_BALBcJ_G0001515.1 mouse_genomes_project 5 53230336 53233937 + TEC TEC MGP_BALBcJ_T0001497.1 MGP_BALBcJ_G0001415.1 mouse_genomes_project 5 30216320 30221344 - TEC TEC MGP_BALBcJ_T0070489.1 MGP_BALBcJ_G0029327.1 mouse_genomes_project 5 22055395 22067514 - MGP_BALBcJ_P0070489 Abcf2 protein_coding protein_coding MGP_BALBcJ_T0074611.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129340028 129410450 + MGP_BALBcJ_P0074611 Sfswap protein_coding protein_coding MGP_BALBcJ_T0074612.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129340047 129408714 + MGP_BALBcJ_P0074612 Sfswap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074613.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129340053 129343451 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0074614.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129340058 129410447 + Sfswap protein_coding processed_transcript MGP_BALBcJ_T0074615.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129340256 129343189 + MGP_BALBcJ_P0074615 Sfswap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074616.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129341201 129341856 + Sfswap protein_coding TEC MGP_BALBcJ_T0074617.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129341966 129342942 + Sfswap protein_coding processed_transcript MGP_BALBcJ_T0074618.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129342781 129343696 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0074619.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129342903 129393610 + MGP_BALBcJ_P0074619 Sfswap protein_coding unknown_likely_coding MGP_BALBcJ_T0074620.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129343148 129351957 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0074621.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129380236 129389705 + MGP_BALBcJ_P0074621 Sfswap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074622.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129387783 129410447 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0074623.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129389620 129398340 + Sfswap protein_coding processed_transcript MGP_BALBcJ_T0074624.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129398999 129410450 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0074625.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129399340 129409080 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0074626.1 MGP_BALBcJ_G0030102.1 mouse_genomes_project 5 129409782 129410450 + Sfswap protein_coding retained_intron MGP_BALBcJ_T0099903.1 MGP_BALBcJ_G0037939.1 mouse_genomes_project 5 16887928 16888031 - Gm25335 snRNA snRNA MGP_BALBcJ_T0001496.1 MGP_BALBcJ_G0001414.1 mouse_genomes_project 5 30075543 30077788 + TEC TEC MGP_BALBcJ_T0098979.1 MGP_BALBcJ_G0037025.1 mouse_genomes_project 5 134133758 134134174 - Gm43480 sense_intronic sense_intronic MGP_BALBcJ_T0008163.1 MGP_BALBcJ_G0006651.1 mouse_genomes_project 5 75456405 75496481 + Gm34728 lincRNA lincRNA MGP_BALBcJ_T0072774.1 MGP_BALBcJ_G0029753.1 mouse_genomes_project 5 97613848 97722583 - MGP_BALBcJ_P0072774 Prkg2 protein_coding protein_coding MGP_BALBcJ_T0072775.1 MGP_BALBcJ_G0029753.1 mouse_genomes_project 5 97615343 97628210 - MGP_BALBcJ_P0072775 Prkg2 protein_coding protein_coding MGP_BALBcJ_T0072776.1 MGP_BALBcJ_G0029753.1 mouse_genomes_project 5 97615343 97628208 - MGP_BALBcJ_P0072776 Prkg2 protein_coding protein_coding MGP_BALBcJ_T0072777.1 MGP_BALBcJ_G0029753.1 mouse_genomes_project 5 97615795 97722267 - MGP_BALBcJ_P0072777 Prkg2 protein_coding protein_coding MGP_BALBcJ_T0072778.1 MGP_BALBcJ_G0029753.1 mouse_genomes_project 5 97631756 97651197 - Prkg2 protein_coding retained_intron MGP_BALBcJ_T0070214.1 MGP_BALBcJ_G0029276.1 mouse_genomes_project 5 11370852 11598810 + Sema3e protein_coding retained_intron MGP_BALBcJ_T0070215.1 MGP_BALBcJ_G0029276.1 mouse_genomes_project 5 11370852 11601185 + MGP_BALBcJ_P0070215 Sema3e protein_coding protein_coding MGP_BALBcJ_T0070216.1 MGP_BALBcJ_G0029276.1 mouse_genomes_project 5 11574090 11575939 + Sema3e protein_coding retained_intron MGP_BALBcJ_T0074992.1 MGP_BALBcJ_G0030167.1 mouse_genomes_project 5 135655005 135685695 - MGP_BALBcJ_P0074992 Styxl1 protein_coding protein_coding MGP_BALBcJ_T0074993.1 MGP_BALBcJ_G0030167.1 mouse_genomes_project 5 135655035 135677766 - MGP_BALBcJ_P0074993 Styxl1 protein_coding protein_coding MGP_BALBcJ_T0074994.1 MGP_BALBcJ_G0030167.1 mouse_genomes_project 5 135664416 135685773 - MGP_BALBcJ_P0074994 Styxl1 protein_coding protein_coding MGP_BALBcJ_T0075579.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140791985 140833157 - MGP_BALBcJ_P0075579 Iqce protein_coding protein_coding MGP_BALBcJ_T0075580.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140793663 140796400 - Iqce protein_coding retained_intron MGP_BALBcJ_T0075581.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140793663 140833044 - Iqce protein_coding retained_intron MGP_BALBcJ_T0075582.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140795438 140833118 - MGP_BALBcJ_P0075582 Iqce protein_coding protein_coding MGP_BALBcJ_T0075583.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140796187 140814653 - MGP_BALBcJ_P0075583 Iqce protein_coding protein_coding MGP_BALBcJ_T0075584.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140796316 140800617 - Iqce protein_coding retained_intron MGP_BALBcJ_T0075585.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140814180 140821031 - Iqce protein_coding retained_intron MGP_BALBcJ_T0075586.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140814967 140833055 - Iqce protein_coding retained_intron MGP_BALBcJ_T0075587.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140821027 140832748 - Iqce protein_coding processed_transcript MGP_BALBcJ_T0075588.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140821032 140833157 - MGP_BALBcJ_P0075588 Iqce protein_coding protein_coding MGP_BALBcJ_T0075589.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140823828 140833079 - MGP_BALBcJ_P0075589 Iqce protein_coding protein_coding MGP_BALBcJ_T0075590.1 MGP_BALBcJ_G0030290.1 mouse_genomes_project 5 140824226 140833073 - Iqce protein_coding retained_intron MGP_BALBcJ_T0014983.1 MGP_BALBcJ_G0013080.1 mouse_genomes_project 5 62069415 62070280 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074469.1 MGP_BALBcJ_G0030073.1 mouse_genomes_project 5 124296563 124304530 + MGP_BALBcJ_P0074469 Snrnp35 protein_coding protein_coding MGP_BALBcJ_T0074470.1 MGP_BALBcJ_G0030073.1 mouse_genomes_project 5 124296631 124303896 + MGP_BALBcJ_P0074470 Snrnp35 protein_coding protein_coding MGP_BALBcJ_T0074471.1 MGP_BALBcJ_G0030073.1 mouse_genomes_project 5 124296887 124304513 + MGP_BALBcJ_P0074471 Snrnp35 protein_coding protein_coding MGP_BALBcJ_T0001701.1 MGP_BALBcJ_G0001616.1 mouse_genomes_project 5 74654795 74657222 - TEC TEC MGP_BALBcJ_T0001733.1 MGP_BALBcJ_G0001648.1 mouse_genomes_project 5 102090061 102091197 + TEC TEC MGP_BALBcJ_T0001686.1 MGP_BALBcJ_G0001601.1 mouse_genomes_project 5 71279323 71280316 + TEC TEC MGP_BALBcJ_T0008205.1 MGP_BALBcJ_G0006686.1 mouse_genomes_project 5 98916445 98923753 + 2310034O05Rik lincRNA lincRNA MGP_BALBcJ_T0008206.1 MGP_BALBcJ_G0006686.1 mouse_genomes_project 5 98916461 98922445 + 2310034O05Rik lincRNA lincRNA MGP_BALBcJ_T0001884.1 MGP_BALBcJ_G0001797.1 mouse_genomes_project 5 138807723 138808514 + TEC TEC MGP_BALBcJ_T0072590.1 MGP_BALBcJ_G0029712.1 mouse_genomes_project 5 89480242 89489063 + MGP_BALBcJ_P0072590 Areg protein_coding protein_coding MGP_BALBcJ_T0070421.1 MGP_BALBcJ_G0029316.1 mouse_genomes_project 5 21869966 21878034 - MGP_BALBcJ_P0070421 Atg9b protein_coding protein_coding MGP_BALBcJ_T0070422.1 MGP_BALBcJ_G0029316.1 mouse_genomes_project 5 21870405 21876526 - Atg9b protein_coding processed_transcript MGP_BALBcJ_T0070423.1 MGP_BALBcJ_G0029316.1 mouse_genomes_project 5 21872890 21873752 - Atg9b protein_coding processed_transcript MGP_BALBcJ_T0073468.1 MGP_BALBcJ_G0029900.1 mouse_genomes_project 5 113283023 113289809 - MGP_BALBcJ_P0073468 Tmem119 protein_coding protein_coding MGP_BALBcJ_T0073469.1 MGP_BALBcJ_G0029900.1 mouse_genomes_project 5 113284932 113289739 - MGP_BALBcJ_P0073469 Tmem119 protein_coding protein_coding MGP_BALBcJ_T0004872.1 MGP_BALBcJ_G0004189.1 mouse_genomes_project 5 149871746 149875769 - Gm43150 antisense antisense MGP_BALBcJ_T0014823.1 MGP_BALBcJ_G0012920.1 mouse_genomes_project 5 2577166 2577596 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001677.1 MGP_BALBcJ_G0001593.1 mouse_genomes_project 5 70462100 70463090 - TEC TEC MGP_BALBcJ_T0099974.1 MGP_BALBcJ_G0038010.1 mouse_genomes_project 5 130598714 130598818 + Gm23761 snRNA snRNA MGP_BALBcJ_T0008184.1 MGP_BALBcJ_G0006669.1 mouse_genomes_project 5 95502541 95506215 + 1700016F12Rik lincRNA lincRNA MGP_BALBcJ_T0072641.1 MGP_BALBcJ_G0029724.1 mouse_genomes_project 5 90672574 90679252 - MGP_BALBcJ_P0072641 Cxcl9 protein_coding protein_coding MGP_BALBcJ_T0072642.1 MGP_BALBcJ_G0029724.1 mouse_genomes_project 5 90677792 90679251 - Cxcl9 protein_coding retained_intron MGP_BALBcJ_T0015155.1 MGP_BALBcJ_G0013252.1 mouse_genomes_project 5 139367206 139369252 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008397.1 MGP_BALBcJ_G0006807.1 mouse_genomes_project 5 137433437 137434393 + 9130604C24Rik lincRNA lincRNA MGP_BALBcJ_T0001595.1 MGP_BALBcJ_G0001512.1 mouse_genomes_project 5 51600998 51605052 + TEC TEC MGP_BALBcJ_T0073306.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110123264 110232369 - MGP_BALBcJ_P0073306 Ep400 protein_coding protein_coding MGP_BALBcJ_T0073307.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110123264 110232559 - MGP_BALBcJ_P0073307 Ep400 protein_coding protein_coding MGP_BALBcJ_T0073308.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110123269 110232559 - MGP_BALBcJ_P0073308 Ep400 protein_coding protein_coding MGP_BALBcJ_T0073309.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110126261 110127080 - Ep400 protein_coding processed_transcript MGP_BALBcJ_T0073310.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110126425 110127699 - Ep400 protein_coding retained_intron MGP_BALBcJ_T0073311.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110147256 110151480 - Ep400 protein_coding retained_intron MGP_BALBcJ_T0073312.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110155273 110158445 - Ep400 protein_coding retained_intron MGP_BALBcJ_T0073313.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110156652 110167254 - MGP_BALBcJ_P0073313 Ep400 protein_coding protein_coding MGP_BALBcJ_T0073314.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110197333 110232427 - MGP_BALBcJ_P0073314 Ep400 protein_coding protein_coding MGP_BALBcJ_T0073315.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110197731 110231997 - MGP_BALBcJ_P0073315 Ep400 protein_coding protein_coding MGP_BALBcJ_T0073316.1 MGP_BALBcJ_G0029868.1 mouse_genomes_project 5 110216560 110232559 - Ep400 protein_coding processed_transcript MGP_BALBcJ_T0001864.1 MGP_BALBcJ_G0001778.1 mouse_genomes_project 5 132306522 132308907 - TEC TEC MGP_BALBcJ_T0072843.1 MGP_BALBcJ_G0029764.1 mouse_genomes_project 5 99280150 99299561 - MGP_BALBcJ_P0072843 Plac8 protein_coding protein_coding MGP_BALBcJ_T0072844.1 MGP_BALBcJ_G0029764.1 mouse_genomes_project 5 99280151 99289701 - MGP_BALBcJ_P0072844 Plac8 protein_coding protein_coding MGP_BALBcJ_T0072845.1 MGP_BALBcJ_G0029764.1 mouse_genomes_project 5 99280152 99290266 - MGP_BALBcJ_P0072845 Plac8 protein_coding protein_coding MGP_BALBcJ_T0072846.1 MGP_BALBcJ_G0029764.1 mouse_genomes_project 5 99289279 99299508 - Plac8 protein_coding retained_intron MGP_BALBcJ_T0001622.1 MGP_BALBcJ_G0001538.1 mouse_genomes_project 5 62114258 62116577 + TEC TEC MGP_BALBcJ_T0001885.1 MGP_BALBcJ_G0001798.1 mouse_genomes_project 5 140144960 140147506 - TEC TEC MGP_BALBcJ_T0008383.1 MGP_BALBcJ_G0006796.1 mouse_genomes_project 5 131209877 131233131 - Gm42590 lincRNA lincRNA MGP_BALBcJ_T0073544.1 MGP_BALBcJ_G0029913.1 mouse_genomes_project 5 113882820 113923447 + MGP_BALBcJ_P0073544 Ube3b protein_coding protein_coding MGP_BALBcJ_T0073545.1 MGP_BALBcJ_G0029913.1 mouse_genomes_project 5 113883039 113923446 + MGP_BALBcJ_P0073545 Ube3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073546.1 MGP_BALBcJ_G0029913.1 mouse_genomes_project 5 113883046 113894406 + MGP_BALBcJ_P0073546 Ube3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073547.1 MGP_BALBcJ_G0029913.1 mouse_genomes_project 5 113901043 113923446 + MGP_BALBcJ_P0073547 Ube3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073548.1 MGP_BALBcJ_G0029913.1 mouse_genomes_project 5 113905001 113913408 + Ube3b protein_coding processed_transcript MGP_BALBcJ_T0018133.1 MGP_BALBcJ_G0015546.1 mouse_genomes_project 5 105517355 105657878 - Gm28039 processed_transcript processed_transcript MGP_BALBcJ_T0073647.1 MGP_BALBcJ_G0029935.1 mouse_genomes_project 5 114704397 114719558 - MGP_BALBcJ_P0073647 Mlec protein_coding protein_coding MGP_BALBcJ_T0073648.1 MGP_BALBcJ_G0029935.1 mouse_genomes_project 5 114709524 114712442 - Mlec protein_coding processed_transcript MGP_BALBcJ_T0072197.1 MGP_BALBcJ_G0029613.1 mouse_genomes_project 5 73041160 73043453 + MGP_BALBcJ_P0072197 Gsx2 protein_coding protein_coding MGP_BALBcJ_T0072198.1 MGP_BALBcJ_G0029613.1 mouse_genomes_project 5 73041161 73043185 + MGP_BALBcJ_P0072198 Gsx2 protein_coding protein_coding MGP_BALBcJ_T0075935.1 MGP_BALBcJ_G0030368.1 mouse_genomes_project 5 147650895 147656775 + MGP_BALBcJ_P0075935 Pdx1 protein_coding protein_coding MGP_BALBcJ_T0004730.1 MGP_BALBcJ_G0004087.1 mouse_genomes_project 5 98376483 98378519 + 4930522N08Rik antisense antisense MGP_BALBcJ_T0075131.1 MGP_BALBcJ_G0030191.1 mouse_genomes_project 5 136919022 136928660 + MGP_BALBcJ_P0075131 Plod3 protein_coding protein_coding MGP_BALBcJ_T0075132.1 MGP_BALBcJ_G0030191.1 mouse_genomes_project 5 136919381 136924101 + Plod3 protein_coding retained_intron MGP_BALBcJ_T0075133.1 MGP_BALBcJ_G0030191.1 mouse_genomes_project 5 136919479 136924718 + Plod3 protein_coding retained_intron MGP_BALBcJ_T0075134.1 MGP_BALBcJ_G0030191.1 mouse_genomes_project 5 136922318 136926192 + Plod3 protein_coding retained_intron MGP_BALBcJ_T0075135.1 MGP_BALBcJ_G0030191.1 mouse_genomes_project 5 136922514 136924101 + Plod3 protein_coding retained_intron MGP_BALBcJ_T0075136.1 MGP_BALBcJ_G0030191.1 mouse_genomes_project 5 136923636 136927190 + MGP_BALBcJ_P0075136 Plod3 protein_coding protein_coding MGP_BALBcJ_T0073858.1 MGP_BALBcJ_G0029971.1 mouse_genomes_project 5 117864905 117886793 + MGP_BALBcJ_P0073858 2410131K14Rik protein_coding protein_coding MGP_BALBcJ_T0008454.1 MGP_BALBcJ_G0006852.1 mouse_genomes_project 5 150993181 150995561 - Gm5 lincRNA lincRNA MGP_BALBcJ_T0008455.1 MGP_BALBcJ_G0006852.1 mouse_genomes_project 5 150993249 150995732 - Gm5 lincRNA lincRNA MGP_BALBcJ_T0071711.1 MGP_BALBcJ_G0029530.1 mouse_genomes_project 5 50949063 50950572 + Smim20 protein_coding retained_intron MGP_BALBcJ_T0071712.1 MGP_BALBcJ_G0029530.1 mouse_genomes_project 5 50949118 50960236 + MGP_BALBcJ_P0071712 Smim20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071713.1 MGP_BALBcJ_G0029530.1 mouse_genomes_project 5 50949118 50960236 + MGP_BALBcJ_P0071713 Smim20 protein_coding protein_coding MGP_BALBcJ_T0071714.1 MGP_BALBcJ_G0029530.1 mouse_genomes_project 5 50949157 50960236 + MGP_BALBcJ_P0071714 Smim20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071715.1 MGP_BALBcJ_G0029530.1 mouse_genomes_project 5 50949170 50951246 + Smim20 protein_coding retained_intron MGP_BALBcJ_T0071716.1 MGP_BALBcJ_G0029530.1 mouse_genomes_project 5 50958813 50959722 + Smim20 protein_coding retained_intron MGP_BALBcJ_T0073375.1 MGP_BALBcJ_G0029881.1 mouse_genomes_project 5 111801679 111804294 - Srrd protein_coding processed_transcript MGP_BALBcJ_T0073376.1 MGP_BALBcJ_G0029881.1 mouse_genomes_project 5 111801679 111807292 - MGP_BALBcJ_P0073376 Srrd protein_coding protein_coding MGP_BALBcJ_T0073377.1 MGP_BALBcJ_G0029881.1 mouse_genomes_project 5 111801679 111807312 - MGP_BALBcJ_P0073377 Srrd protein_coding protein_coding MGP_BALBcJ_T0073378.1 MGP_BALBcJ_G0029881.1 mouse_genomes_project 5 111802196 111804204 - Srrd protein_coding retained_intron MGP_BALBcJ_T0073379.1 MGP_BALBcJ_G0029881.1 mouse_genomes_project 5 111802259 111807290 - Srrd protein_coding processed_transcript MGP_BALBcJ_T0073380.1 MGP_BALBcJ_G0029881.1 mouse_genomes_project 5 111803990 111804491 - Srrd protein_coding processed_transcript MGP_BALBcJ_T0072760.1 MGP_BALBcJ_G0029747.1 mouse_genomes_project 5 96552077 96696956 - MGP_BALBcJ_P0072760 Antxr2 protein_coding protein_coding MGP_BALBcJ_T0072761.1 MGP_BALBcJ_G0029747.1 mouse_genomes_project 5 96591175 96697037 - MGP_BALBcJ_P0072761 Antxr2 protein_coding protein_coding MGP_BALBcJ_T0072762.1 MGP_BALBcJ_G0029747.1 mouse_genomes_project 5 96625320 96665241 - Antxr2 protein_coding processed_transcript MGP_BALBcJ_T0070518.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22349504 22594048 - MGP_BALBcJ_P0070518 Prkag2 protein_coding protein_coding MGP_BALBcJ_T0070519.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22349504 22520726 - MGP_BALBcJ_P0070519 Prkag2 protein_coding protein_coding MGP_BALBcJ_T0070520.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22349508 22488093 - MGP_BALBcJ_P0070520 Prkag2 protein_coding protein_coding MGP_BALBcJ_T0070521.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22350536 22358678 - Prkag2 protein_coding retained_intron MGP_BALBcJ_T0070522.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22356179 22396912 - MGP_BALBcJ_P0070522 Prkag2 protein_coding protein_coding MGP_BALBcJ_T0070523.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22358461 22391094 - MGP_BALBcJ_P0070523 Prkag2 protein_coding protein_coding MGP_BALBcJ_T0070524.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22361798 22375571 - Prkag2 protein_coding retained_intron MGP_BALBcJ_T0070525.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22362324 22396855 - Prkag2 protein_coding retained_intron MGP_BALBcJ_T0070526.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22375579 22397386 - MGP_BALBcJ_P0070526 Prkag2 protein_coding protein_coding MGP_BALBcJ_T0070527.1 MGP_BALBcJ_G0029334.1 mouse_genomes_project 5 22394633 22396853 - Prkag2 protein_coding processed_transcript MGP_BALBcJ_T0004837.1 MGP_BALBcJ_G0004165.1 mouse_genomes_project 5 135754324 135756212 - Srrm3os antisense antisense MGP_BALBcJ_T0014840.1 MGP_BALBcJ_G0012937.1 mouse_genomes_project 5 9753932 9754653 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070865.1 MGP_BALBcJ_G0029396.1 mouse_genomes_project 5 28786369 28786927 - MGP_BALBcJ_P0070865 Gm9970 protein_coding protein_coding MGP_BALBcJ_T0014954.1 MGP_BALBcJ_G0013051.1 mouse_genomes_project 5 53324925 53325631 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099920.1 MGP_BALBcJ_G0037956.1 mouse_genomes_project 5 38061151 38061331 - Gm23022 snRNA snRNA MGP_BALBcJ_T0074633.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555367 129562432 + MGP_BALBcJ_P0074633 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074634.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555373 129558355 + MGP_BALBcJ_P0074634 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074635.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555374 129558272 + MGP_BALBcJ_P0074635 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074636.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555379 129557894 + MGP_BALBcJ_P0074636 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074637.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555381 129558750 + MGP_BALBcJ_P0074637 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074638.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555386 129558566 + MGP_BALBcJ_P0074638 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074639.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555388 129557216 + Mrps17 protein_coding retained_intron MGP_BALBcJ_T0074640.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555404 129557929 + MGP_BALBcJ_P0074640 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074641.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555428 129558165 + MGP_BALBcJ_P0074641 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074642.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555447 129558322 + MGP_BALBcJ_P0074642 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0074643.1 MGP_BALBcJ_G0030106.1 mouse_genomes_project 5 129555567 129556704 + MGP_BALBcJ_P0074643 Mrps17 protein_coding protein_coding MGP_BALBcJ_T0008272.1 MGP_BALBcJ_G0006728.1 mouse_genomes_project 5 111668219 111671459 + 1700028D13Rik lincRNA lincRNA MGP_BALBcJ_T0008273.1 MGP_BALBcJ_G0006728.1 mouse_genomes_project 5 111668262 111671461 + 1700028D13Rik lincRNA lincRNA MGP_BALBcJ_T0070546.1 MGP_BALBcJ_G0029340.1 mouse_genomes_project 5 23188156 23204090 - MGP_BALBcJ_P0070546 Xrcc2 protein_coding protein_coding MGP_BALBcJ_T0070547.1 MGP_BALBcJ_G0029340.1 mouse_genomes_project 5 23190395 23191783 - Xrcc2 protein_coding processed_transcript MGP_BALBcJ_T0070548.1 MGP_BALBcJ_G0029340.1 mouse_genomes_project 5 23194241 23204038 - MGP_BALBcJ_P0070548 Xrcc2 protein_coding protein_coding MGP_BALBcJ_T0070549.1 MGP_BALBcJ_G0029340.1 mouse_genomes_project 5 23194999 23204029 - Xrcc2 protein_coding retained_intron MGP_BALBcJ_T0102585.1 MGP_BALBcJ_G0040401.1 mouse_genomes_project 5 143319484 143320423 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008138.1 MGP_BALBcJ_G0006631.1 mouse_genomes_project 5 70574355 70576498 + 4933408A14Rik lincRNA lincRNA MGP_BALBcJ_T0001837.1 MGP_BALBcJ_G0001751.1 mouse_genomes_project 5 129766152 129768013 + TEC TEC MGP_BALBcJ_T0010701.1 MGP_BALBcJ_G0008826.1 mouse_genomes_project 5 134294035 134294134 + Gm26340 miRNA miRNA MGP_BALBcJ_T0099907.1 MGP_BALBcJ_G0037943.1 mouse_genomes_project 5 20014024 20014089 - Gm24512 snRNA snRNA MGP_BALBcJ_T0073960.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120922913 120929929 + MGP_BALBcJ_P0073960 protein_coding protein_coding MGP_BALBcJ_T0073961.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120922978 120923692 + protein_coding retained_intron MGP_BALBcJ_T0073962.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120923838 120927133 + protein_coding retained_intron MGP_BALBcJ_T0073963.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120927325 120928072 + protein_coding retained_intron MGP_BALBcJ_T0073964.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120927411 120929653 + MGP_BALBcJ_P0073964 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073965.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120927764 120929243 + protein_coding retained_intron MGP_BALBcJ_T0073966.1 MGP_BALBcJ_G0029999.1 mouse_genomes_project 5 120928883 120929654 + protein_coding retained_intron MGP_BALBcJ_T0072741.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95445600 95470292 + MGP_BALBcJ_P0072741 Anxa3 protein_coding protein_coding MGP_BALBcJ_T0072742.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95445646 95499471 + MGP_BALBcJ_P0072742 Anxa3 protein_coding protein_coding MGP_BALBcJ_T0072743.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95445702 95478627 + MGP_BALBcJ_P0072743 Anxa3 protein_coding protein_coding MGP_BALBcJ_T0072744.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95445761 95479568 + MGP_BALBcJ_P0072744 Anxa3 protein_coding protein_coding MGP_BALBcJ_T0072745.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95465089 95488465 + Anxa3 protein_coding retained_intron MGP_BALBcJ_T0072746.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95470183 95491846 + Anxa3 protein_coding retained_intron MGP_BALBcJ_T0072747.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95481589 95484104 + Anxa3 protein_coding retained_intron MGP_BALBcJ_T0072748.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95483698 95499187 + Anxa3 protein_coding retained_intron MGP_BALBcJ_T0072749.1 MGP_BALBcJ_G0029742.1 mouse_genomes_project 5 95495500 95499365 + MGP_BALBcJ_P0072749 Anxa3 protein_coding protein_coding MGP_BALBcJ_T0010682.1 MGP_BALBcJ_G0008807.1 mouse_genomes_project 5 103052627 103052737 + Gm23616 miRNA miRNA MGP_BALBcJ_T0001596.1 MGP_BALBcJ_G0001513.1 mouse_genomes_project 5 51614615 51616386 + TEC TEC MGP_BALBcJ_T0099963.1 MGP_BALBcJ_G0037999.1 mouse_genomes_project 5 115057026 115057167 + Gm24265 snRNA snRNA MGP_BALBcJ_T0074234.1 MGP_BALBcJ_G0030037.1 mouse_genomes_project 5 122781872 122797427 + MGP_BALBcJ_P0074234 Orai1 protein_coding protein_coding MGP_BALBcJ_T0074235.1 MGP_BALBcJ_G0030037.1 mouse_genomes_project 5 122781872 122797727 + MGP_BALBcJ_P0074235 Orai1 protein_coding protein_coding MGP_BALBcJ_T0074236.1 MGP_BALBcJ_G0030037.1 mouse_genomes_project 5 122782136 122796761 + Orai1 protein_coding processed_transcript MGP_BALBcJ_T0098971.1 MGP_BALBcJ_G0037018.1 mouse_genomes_project 5 109652586 109653294 + Gm43138 sense_intronic sense_intronic MGP_BALBcJ_T0015176.1 MGP_BALBcJ_G0013273.1 mouse_genomes_project 5 145958869 145959034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071985.1 MGP_BALBcJ_G0029573.1 mouse_genomes_project 5 65540470 65546583 + MGP_BALBcJ_P0071985 Shisa3 protein_coding protein_coding MGP_BALBcJ_T0071986.1 MGP_BALBcJ_G0029573.1 mouse_genomes_project 5 65540557 65556172 + MGP_BALBcJ_P0071986 Shisa3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071963.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210025 65234775 + MGP_BALBcJ_P0071963 Tmem33 protein_coding protein_coding MGP_BALBcJ_T0071964.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210111 65214076 + MGP_BALBcJ_P0071964 Tmem33 protein_coding protein_coding MGP_BALBcJ_T0071965.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210156 65218017 + MGP_BALBcJ_P0071965 Tmem33 protein_coding protein_coding MGP_BALBcJ_T0071966.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210156 65229973 + MGP_BALBcJ_P0071966 Tmem33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071967.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210157 65234775 + MGP_BALBcJ_P0071967 Tmem33 protein_coding protein_coding MGP_BALBcJ_T0071968.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210164 65213743 + MGP_BALBcJ_P0071968 Tmem33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071969.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210214 65212537 + Tmem33 protein_coding retained_intron MGP_BALBcJ_T0071970.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210265 65234775 + MGP_BALBcJ_P0071970 Tmem33 protein_coding protein_coding MGP_BALBcJ_T0071971.1 MGP_BALBcJ_G0029570.1 mouse_genomes_project 5 65210356 65218455 + Tmem33 protein_coding retained_intron MGP_BALBcJ_T0073248.1 MGP_BALBcJ_G0029857.1 mouse_genomes_project 5 109624772 109674203 + MGP_BALBcJ_P0073248 Golga3 protein_coding protein_coding MGP_BALBcJ_T0073249.1 MGP_BALBcJ_G0029857.1 mouse_genomes_project 5 109624928 109634502 + Golga3 protein_coding retained_intron MGP_BALBcJ_T0073250.1 MGP_BALBcJ_G0029857.1 mouse_genomes_project 5 109624950 109632569 + MGP_BALBcJ_P0073250 Golga3 protein_coding protein_coding MGP_BALBcJ_T0073251.1 MGP_BALBcJ_G0029857.1 mouse_genomes_project 5 109624950 109670933 + MGP_BALBcJ_P0073251 Golga3 protein_coding protein_coding MGP_BALBcJ_T0073252.1 MGP_BALBcJ_G0029857.1 mouse_genomes_project 5 109624968 109636415 + Golga3 protein_coding retained_intron MGP_BALBcJ_T0073885.1 MGP_BALBcJ_G0029977.1 mouse_genomes_project 5 120118612 120133274 - MGP_BALBcJ_P0073885 Sdsl protein_coding protein_coding MGP_BALBcJ_T0073886.1 MGP_BALBcJ_G0029977.1 mouse_genomes_project 5 120118628 120133321 - MGP_BALBcJ_P0073886 Sdsl protein_coding protein_coding MGP_BALBcJ_T0073887.1 MGP_BALBcJ_G0029977.1 mouse_genomes_project 5 120121114 120127864 - MGP_BALBcJ_P0073887 Sdsl protein_coding protein_coding MGP_BALBcJ_T0075974.1 MGP_BALBcJ_G0030375.1 mouse_genomes_project 5 148279384 148296031 - MGP_BALBcJ_P0075974 Slc46a3 protein_coding protein_coding MGP_BALBcJ_T0075975.1 MGP_BALBcJ_G0030375.1 mouse_genomes_project 5 148279388 148296031 - MGP_BALBcJ_P0075975 Slc46a3 protein_coding protein_coding MGP_BALBcJ_T0075976.1 MGP_BALBcJ_G0030375.1 mouse_genomes_project 5 148279506 148280817 - Slc46a3 protein_coding retained_intron MGP_BALBcJ_T0075977.1 MGP_BALBcJ_G0030375.1 mouse_genomes_project 5 148295098 148296031 - MGP_BALBcJ_P0075977 Slc46a3 protein_coding protein_coding MGP_BALBcJ_T0070371.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 20963517 21074064 - MGP_BALBcJ_P0070371 Srpk2 protein_coding protein_coding MGP_BALBcJ_T0070372.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 20965720 21135460 - MGP_BALBcJ_P0070372 Srpk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070373.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 20985783 21002380 - Srpk2 protein_coding processed_transcript MGP_BALBcJ_T0070374.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 20987997 21135026 - MGP_BALBcJ_P0070374 Srpk2 protein_coding protein_coding MGP_BALBcJ_T0070375.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 21004380 21134979 - Srpk2 protein_coding retained_intron MGP_BALBcJ_T0070376.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 21006778 21009190 - Srpk2 protein_coding retained_intron MGP_BALBcJ_T0070377.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 21007174 21143719 - MGP_BALBcJ_P0070377 Srpk2 protein_coding protein_coding MGP_BALBcJ_T0070378.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 21027424 21135367 - MGP_BALBcJ_P0070378 Srpk2 protein_coding protein_coding MGP_BALBcJ_T0070379.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 21027529 21143702 - MGP_BALBcJ_P0070379 Srpk2 protein_coding protein_coding MGP_BALBcJ_T0070380.1 MGP_BALBcJ_G0029307.1 mouse_genomes_project 5 21072256 21074085 - Srpk2 protein_coding retained_intron MGP_BALBcJ_T0004751.1 MGP_BALBcJ_G0004104.1 mouse_genomes_project 5 109778021 109780023 - Gm15792 antisense antisense MGP_BALBcJ_T0011586.1 MGP_BALBcJ_G0009711.1 mouse_genomes_project 5 111676972 111677333 - Gm27998 misc_RNA misc_RNA MGP_BALBcJ_T0001552.1 MGP_BALBcJ_G0001470.1 mouse_genomes_project 5 45887578 45890155 + TEC TEC MGP_BALBcJ_T0018098.1 MGP_BALBcJ_G0015533.1 mouse_genomes_project 5 34290183 34319294 - Gm42936 processed_transcript processed_transcript MGP_BALBcJ_T0074293.1 MGP_BALBcJ_G0030048.1 mouse_genomes_project 5 123285099 123305277 + MGP_BALBcJ_P0074293 Lrrc43 protein_coding protein_coding MGP_BALBcJ_T0074294.1 MGP_BALBcJ_G0030048.1 mouse_genomes_project 5 123285119 123305290 + MGP_BALBcJ_P0074294 Lrrc43 protein_coding protein_coding MGP_BALBcJ_T0074295.1 MGP_BALBcJ_G0030048.1 mouse_genomes_project 5 123285121 123305283 + MGP_BALBcJ_P0074295 Lrrc43 protein_coding protein_coding MGP_BALBcJ_T0014834.1 MGP_BALBcJ_G0012931.1 mouse_genomes_project 5 6817066 6818030 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001585.1 MGP_BALBcJ_G0001502.1 mouse_genomes_project 5 49139792 49143165 - TEC TEC MGP_BALBcJ_T0008044.1 MGP_BALBcJ_G0006564.1 mouse_genomes_project 5 23155862 23156212 - Gm10062 lincRNA lincRNA MGP_BALBcJ_T0008046.1 MGP_BALBcJ_G0006564.1 mouse_genomes_project 5 23155869 23157324 - Gm10062 lincRNA lincRNA MGP_BALBcJ_T0099900.1 MGP_BALBcJ_G0037936.1 mouse_genomes_project 5 4197191 4197342 - Gm24525 snRNA snRNA MGP_BALBcJ_T0008457.1 MGP_BALBcJ_G0006854.1 mouse_genomes_project 5 151093384 151095863 - Gm43598 lincRNA lincRNA MGP_BALBcJ_T0101224.1 MGP_BALBcJ_G0039260.1 mouse_genomes_project 5 110151361 110151494 - Gm26079 snoRNA snoRNA MGP_BALBcJ_T0008435.1 MGP_BALBcJ_G0006840.1 mouse_genomes_project 5 149450743 149456556 + Gm15408 lincRNA lincRNA MGP_BALBcJ_T0001689.1 MGP_BALBcJ_G0001604.1 mouse_genomes_project 5 72025655 72026405 + TEC TEC MGP_BALBcJ_T0015060.1 MGP_BALBcJ_G0013157.1 mouse_genomes_project 5 98536518 98536976 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008424.1 MGP_BALBcJ_G0006831.1 mouse_genomes_project 5 148357020 148364408 - Gm15721 lincRNA lincRNA MGP_BALBcJ_T0072429.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85908050 85918081 + protein_coding retained_intron MGP_BALBcJ_T0072430.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85908050 85909320 + protein_coding retained_intron MGP_BALBcJ_T0072431.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85908050 85909378 + protein_coding retained_intron MGP_BALBcJ_T0072432.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85908069 85917690 + MGP_BALBcJ_P0072432 protein_coding protein_coding MGP_BALBcJ_T0072433.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85908075 85926469 + MGP_BALBcJ_P0072433 protein_coding protein_coding MGP_BALBcJ_T0072434.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85908689 85918546 + protein_coding processed_transcript MGP_BALBcJ_T0072435.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85909075 85913203 + protein_coding retained_intron MGP_BALBcJ_T0072436.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85914979 85915905 + protein_coding retained_intron MGP_BALBcJ_T0072437.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85921379 85923157 + protein_coding retained_intron MGP_BALBcJ_T0072438.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85921692 85926389 + protein_coding retained_intron MGP_BALBcJ_T0072439.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85922835 85926415 + protein_coding retained_intron MGP_BALBcJ_T0072440.1 MGP_BALBcJ_G0029665.1 mouse_genomes_project 5 85924419 85925949 + protein_coding retained_intron MGP_BALBcJ_T0014880.1 MGP_BALBcJ_G0012977.1 mouse_genomes_project 5 21498010 21498535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075691.1 MGP_BALBcJ_G0030314.1 mouse_genomes_project 5 143497808 143511672 - E130309D02Rik protein_coding processed_transcript MGP_BALBcJ_T0075692.1 MGP_BALBcJ_G0030314.1 mouse_genomes_project 5 143497820 143511968 - MGP_BALBcJ_P0075692 E130309D02Rik protein_coding protein_coding MGP_BALBcJ_T0075693.1 MGP_BALBcJ_G0030314.1 mouse_genomes_project 5 143497822 143511739 - E130309D02Rik protein_coding retained_intron MGP_BALBcJ_T0075694.1 MGP_BALBcJ_G0030314.1 mouse_genomes_project 5 143504916 143511948 - E130309D02Rik protein_coding processed_transcript MGP_BALBcJ_T0001491.1 MGP_BALBcJ_G0001410.1 mouse_genomes_project 5 29312401 29312633 + TEC TEC MGP_BALBcJ_T0008429.1 MGP_BALBcJ_G0006836.1 mouse_genomes_project 5 149391151 149440051 - Gm15406 lincRNA lincRNA MGP_BALBcJ_T0008431.1 MGP_BALBcJ_G0006836.1 mouse_genomes_project 5 149396917 149439994 - Gm15406 lincRNA lincRNA MGP_BALBcJ_T0008394.1 MGP_BALBcJ_G0006804.1 mouse_genomes_project 5 137100855 137116893 - Gm3054 lincRNA lincRNA MGP_BALBcJ_T0010687.1 MGP_BALBcJ_G0008812.1 mouse_genomes_project 5 112826611 112826667 - Mir7230 miRNA miRNA MGP_BALBcJ_T0014850.1 MGP_BALBcJ_G0012947.1 mouse_genomes_project 5 14852691 14853754 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014961.1 MGP_BALBcJ_G0013058.1 mouse_genomes_project 5 55136795 55138239 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070199.1 MGP_BALBcJ_G0029273.1 mouse_genomes_project 5 6520072 6763150 - MGP_BALBcJ_P0070199 Grm3 protein_coding protein_coding MGP_BALBcJ_T0098965.1 MGP_BALBcJ_G0037012.1 mouse_genomes_project 5 45668521 45670661 + Gm20475 sense_intronic sense_intronic MGP_BALBcJ_T0073874.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119764326 119847665 + MGP_BALBcJ_P0073874 Rbm19 protein_coding protein_coding MGP_BALBcJ_T0073875.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119764378 119766843 + Rbm19 protein_coding retained_intron MGP_BALBcJ_T0073876.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119764381 119847663 + MGP_BALBcJ_P0073876 Rbm19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073877.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119766457 119768155 + Rbm19 protein_coding retained_intron MGP_BALBcJ_T0073878.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119805528 119847655 + Rbm19 protein_coding processed_transcript MGP_BALBcJ_T0073879.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119811437 119846877 + Rbm19 protein_coding processed_transcript MGP_BALBcJ_T0073880.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119817080 119834924 + Rbm19 protein_coding processed_transcript MGP_BALBcJ_T0073881.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119818674 119847661 + Rbm19 protein_coding processed_transcript MGP_BALBcJ_T0073882.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119821863 119846674 + Rbm19 protein_coding processed_transcript MGP_BALBcJ_T0073883.1 MGP_BALBcJ_G0029975.1 mouse_genomes_project 5 119824488 119846653 + Rbm19 protein_coding processed_transcript MGP_BALBcJ_T0001662.1 MGP_BALBcJ_G0001578.1 mouse_genomes_project 5 65566285 65567923 - TEC TEC MGP_BALBcJ_T0102592.1 MGP_BALBcJ_G0040408.1 mouse_genomes_project 5 152012747 152053603 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015101.1 MGP_BALBcJ_G0013198.1 mouse_genomes_project 5 110142295 110143987 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010696.1 MGP_BALBcJ_G0008821.1 mouse_genomes_project 5 123319687 123319746 - Mir7647 miRNA miRNA MGP_BALBcJ_T0004858.1 MGP_BALBcJ_G0004180.1 mouse_genomes_project 5 143525854 143529312 + 0610040B10Rik antisense antisense MGP_BALBcJ_T0004859.1 MGP_BALBcJ_G0004180.1 mouse_genomes_project 5 143525915 143527558 + 0610040B10Rik antisense antisense MGP_BALBcJ_T0004860.1 MGP_BALBcJ_G0004180.1 mouse_genomes_project 5 143525934 143529309 + 0610040B10Rik antisense antisense MGP_BALBcJ_T0015039.1 MGP_BALBcJ_G0013136.1 mouse_genomes_project 5 86797635 86798184 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070684.1 MGP_BALBcJ_G0029370.1 mouse_genomes_project 5 28191799 28202103 + MGP_BALBcJ_P0070684 Slc35f6 protein_coding protein_coding MGP_BALBcJ_T0070685.1 MGP_BALBcJ_G0029370.1 mouse_genomes_project 5 28191811 28197143 + Slc35f6 protein_coding retained_intron MGP_BALBcJ_T0070686.1 MGP_BALBcJ_G0029370.1 mouse_genomes_project 5 28191825 28202050 + MGP_BALBcJ_P0070686 Slc35f6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070687.1 MGP_BALBcJ_G0029370.1 mouse_genomes_project 5 28191834 28199959 + Slc35f6 protein_coding retained_intron MGP_BALBcJ_T0070688.1 MGP_BALBcJ_G0029370.1 mouse_genomes_project 5 28191870 28202050 + MGP_BALBcJ_P0070688 Slc35f6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070689.1 MGP_BALBcJ_G0029370.1 mouse_genomes_project 5 28191880 28203596 + MGP_BALBcJ_P0070689 Slc35f6 protein_coding protein_coding MGP_BALBcJ_T0008025.1 MGP_BALBcJ_G0006551.1 mouse_genomes_project 5 14199660 14201405 + Gm28710 lincRNA lincRNA MGP_BALBcJ_T0014848.1 MGP_BALBcJ_G0012945.1 mouse_genomes_project 5 13876840 13877859 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004694.1 MGP_BALBcJ_G0004062.1 mouse_genomes_project 5 65775777 65841077 + Gm15477 antisense antisense MGP_BALBcJ_T0004695.1 MGP_BALBcJ_G0004062.1 mouse_genomes_project 5 65775851 65836545 + Gm15477 antisense antisense MGP_BALBcJ_T0001475.1 MGP_BALBcJ_G0001395.1 mouse_genomes_project 5 22857710 22861730 + TEC TEC MGP_BALBcJ_T0073807.1 MGP_BALBcJ_G0029961.1 mouse_genomes_project 5 116920017 116956543 + MGP_BALBcJ_P0073807 Vsig10 protein_coding protein_coding MGP_BALBcJ_T0073808.1 MGP_BALBcJ_G0029961.1 mouse_genomes_project 5 116920227 116954649 + MGP_BALBcJ_P0073808 Vsig10 protein_coding protein_coding MGP_BALBcJ_T0073809.1 MGP_BALBcJ_G0029961.1 mouse_genomes_project 5 116920253 116940498 + Vsig10 protein_coding retained_intron MGP_BALBcJ_T0073810.1 MGP_BALBcJ_G0029961.1 mouse_genomes_project 5 116920296 116926250 + Vsig10 protein_coding retained_intron MGP_BALBcJ_T0073811.1 MGP_BALBcJ_G0029961.1 mouse_genomes_project 5 116924744 116956535 + Vsig10 protein_coding processed_transcript MGP_BALBcJ_T0073812.1 MGP_BALBcJ_G0029961.1 mouse_genomes_project 5 116951261 116956543 + Vsig10 protein_coding processed_transcript MGP_BALBcJ_T0099951.1 MGP_BALBcJ_G0037987.1 mouse_genomes_project 5 98621940 98622039 - Gm22838 snRNA snRNA MGP_BALBcJ_T0014956.1 MGP_BALBcJ_G0013053.1 mouse_genomes_project 5 53365431 53366781 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008400.1 MGP_BALBcJ_G0006810.1 mouse_genomes_project 5 138178523 138216471 - lincRNA lincRNA MGP_BALBcJ_T0014933.1 MGP_BALBcJ_G0013030.1 mouse_genomes_project 5 39523225 39524117 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014955.1 MGP_BALBcJ_G0013052.1 mouse_genomes_project 5 53325774 53326081 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073184.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107668148 107692822 + MGP_BALBcJ_P0073184 Idua protein_coding protein_coding MGP_BALBcJ_T0073185.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107676882 107692827 + MGP_BALBcJ_P0073185 Idua protein_coding protein_coding MGP_BALBcJ_T0073186.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107676882 107692822 + MGP_BALBcJ_P0073186 Idua protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073187.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107677071 107689549 + Idua protein_coding retained_intron MGP_BALBcJ_T0073188.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107677087 107692822 + MGP_BALBcJ_P0073188 Idua protein_coding protein_coding MGP_BALBcJ_T0073189.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107677123 107692669 + MGP_BALBcJ_P0073189 Idua protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073190.1 MGP_BALBcJ_G0029838.1 mouse_genomes_project 5 107677235 107688045 + Idua protein_coding processed_transcript MGP_BALBcJ_T0070887.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28799027 28837262 - MGP_BALBcJ_P0070887 Ift172 protein_coding protein_coding MGP_BALBcJ_T0070888.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28799030 28800404 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070889.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28799303 28800561 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070890.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28806234 28807000 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070891.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28807108 28809677 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070892.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28808585 28809385 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070893.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28812092 28826476 - MGP_BALBcJ_P0070893 Ift172 protein_coding protein_coding MGP_BALBcJ_T0070894.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28817744 28827497 - MGP_BALBcJ_P0070894 Ift172 protein_coding protein_coding MGP_BALBcJ_T0070895.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28821564 28837194 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070896.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28831521 28832634 - Ift172 protein_coding retained_intron MGP_BALBcJ_T0070897.1 MGP_BALBcJ_G0029399.1 mouse_genomes_project 5 28832161 28837271 - MGP_BALBcJ_P0070897 Ift172 protein_coding protein_coding MGP_BALBcJ_T0073793.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116726796 116883762 + MGP_BALBcJ_P0073793 Taok3 protein_coding protein_coding MGP_BALBcJ_T0073794.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116732965 116810025 + MGP_BALBcJ_P0073794 Taok3 protein_coding protein_coding MGP_BALBcJ_T0073795.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116739896 116802096 + Taok3 protein_coding retained_intron MGP_BALBcJ_T0073796.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116739896 116883620 + MGP_BALBcJ_P0073796 Taok3 protein_coding protein_coding MGP_BALBcJ_T0073797.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116739903 116883764 + MGP_BALBcJ_P0073797 Taok3 protein_coding protein_coding MGP_BALBcJ_T0073798.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116739923 116849100 + Taok3 protein_coding retained_intron MGP_BALBcJ_T0073799.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116739926 116860622 + MGP_BALBcJ_P0073799 Taok3 protein_coding protein_coding MGP_BALBcJ_T0073800.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116739949 116794246 + Taok3 protein_coding retained_intron MGP_BALBcJ_T0073801.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116810006 116834988 + MGP_BALBcJ_P0073801 Taok3 protein_coding protein_coding MGP_BALBcJ_T0073802.1 MGP_BALBcJ_G0029959.1 mouse_genomes_project 5 116848111 116882424 + MGP_BALBcJ_P0073802 Taok3 protein_coding protein_coding MGP_BALBcJ_T0008360.1 MGP_BALBcJ_G0006783.1 mouse_genomes_project 5 126510530 126513497 - Gm43754 lincRNA lincRNA MGP_BALBcJ_T0070151.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5815645 5870099 + MGP_BALBcJ_P0070151 Abcb1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070152.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5815651 5833555 + MGP_BALBcJ_P0070152 Abcb1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070153.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5815684 5886573 + MGP_BALBcJ_P0070153 Abcb1b protein_coding protein_coding MGP_BALBcJ_T0070154.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5816061 5886208 + MGP_BALBcJ_P0070154 Abcb1b protein_coding unknown_likely_coding MGP_BALBcJ_T0070155.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5845057 5847560 + Abcb1b protein_coding retained_intron MGP_BALBcJ_T0070156.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5860729 5873904 + Abcb1b protein_coding processed_transcript MGP_BALBcJ_T0070157.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5869607 5870099 + Abcb1b protein_coding retained_intron MGP_BALBcJ_T0070158.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5871664 5874063 + Abcb1b protein_coding retained_intron MGP_BALBcJ_T0070159.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5871869 5886193 + MGP_BALBcJ_P0070159 Abcb1b protein_coding protein_coding MGP_BALBcJ_T0070160.1 MGP_BALBcJ_G0029267.1 mouse_genomes_project 5 5872137 5875163 + Abcb1b protein_coding retained_intron MGP_BALBcJ_T0015050.1 MGP_BALBcJ_G0013147.1 mouse_genomes_project 5 91349191 91349765 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072467.1 MGP_BALBcJ_G0029669.1 mouse_genomes_project 5 86086177 86107054 + MGP_BALBcJ_P0072467 Prr27 protein_coding protein_coding MGP_BALBcJ_T0072468.1 MGP_BALBcJ_G0029669.1 mouse_genomes_project 5 86086177 86107054 + MGP_BALBcJ_P0072468 Prr27 protein_coding protein_coding MGP_BALBcJ_T0070319.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19113617 19136898 + Pmpcb protein_coding retained_intron MGP_BALBcJ_T0070320.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19113654 19136903 + MGP_BALBcJ_P0070320 Pmpcb protein_coding protein_coding MGP_BALBcJ_T0070321.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19115357 19117546 + Pmpcb protein_coding retained_intron MGP_BALBcJ_T0070322.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19119216 19120016 + Pmpcb protein_coding retained_intron MGP_BALBcJ_T0070323.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19136264 19136892 + Pmpcb protein_coding retained_intron MGP_BALBcJ_T0070324.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19136390 19136898 + MGP_BALBcJ_P0070324 Pmpcb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070325.1 MGP_BALBcJ_G0029299.1 mouse_genomes_project 5 19136526 19136892 + Pmpcb protein_coding retained_intron MGP_BALBcJ_T0070742.1 MGP_BALBcJ_G0029378.1 mouse_genomes_project 5 28464748 28474568 + MGP_BALBcJ_P0070742 Khk protein_coding protein_coding MGP_BALBcJ_T0070743.1 MGP_BALBcJ_G0029378.1 mouse_genomes_project 5 28464907 28474366 + MGP_BALBcJ_P0070743 Khk protein_coding protein_coding MGP_BALBcJ_T0070744.1 MGP_BALBcJ_G0029378.1 mouse_genomes_project 5 28465150 28474509 + MGP_BALBcJ_P0070744 Khk protein_coding protein_coding MGP_BALBcJ_T0070745.1 MGP_BALBcJ_G0029378.1 mouse_genomes_project 5 28465175 28474113 + MGP_BALBcJ_P0070745 Khk protein_coding protein_coding MGP_BALBcJ_T0070746.1 MGP_BALBcJ_G0029378.1 mouse_genomes_project 5 28473933 28474565 + Khk protein_coding retained_intron MGP_BALBcJ_T0098770.1 MGP_BALBcJ_G0036824.1 mouse_genomes_project 5 134936135 134936264 - Gm25492 scaRNA scaRNA MGP_BALBcJ_T0001829.1 MGP_BALBcJ_G0001743.1 mouse_genomes_project 5 128029227 128031199 - TEC TEC MGP_BALBcJ_T0073518.1 MGP_BALBcJ_G0029909.1 mouse_genomes_project 5 113645079 113751625 + MGP_BALBcJ_P0073518 Acacb protein_coding protein_coding MGP_BALBcJ_T0073519.1 MGP_BALBcJ_G0029909.1 mouse_genomes_project 5 113664694 113751619 + MGP_BALBcJ_P0073519 Acacb protein_coding protein_coding MGP_BALBcJ_T0073520.1 MGP_BALBcJ_G0029909.1 mouse_genomes_project 5 113675466 113689547 + MGP_BALBcJ_P0073520 Acacb protein_coding protein_coding MGP_BALBcJ_T0073521.1 MGP_BALBcJ_G0029909.1 mouse_genomes_project 5 113698956 113751623 + Acacb protein_coding retained_intron MGP_BALBcJ_T0073522.1 MGP_BALBcJ_G0029909.1 mouse_genomes_project 5 113749199 113749825 + Acacb protein_coding retained_intron MGP_BALBcJ_T0075335.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091116 138108732 + MGP_BALBcJ_P0075335 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0075336.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091129 138108784 + MGP_BALBcJ_P0075336 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0075337.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091150 138108733 + MGP_BALBcJ_P0075337 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0075338.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091150 138108784 + MGP_BALBcJ_P0075338 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0075339.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091193 138107766 + MGP_BALBcJ_P0075339 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0075340.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091195 138100050 + MGP_BALBcJ_P0075340 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0075341.1 MGP_BALBcJ_G0030236.1 mouse_genomes_project 5 138091254 138108735 + MGP_BALBcJ_P0075341 Zscan21 protein_coding protein_coding MGP_BALBcJ_T0008079.1 MGP_BALBcJ_G0006585.1 mouse_genomes_project 5 35574310 35578451 + Gm20052 lincRNA lincRNA MGP_BALBcJ_T0008080.1 MGP_BALBcJ_G0006585.1 mouse_genomes_project 5 35574477 35575513 + Gm20052 lincRNA lincRNA MGP_BALBcJ_T0008081.1 MGP_BALBcJ_G0006585.1 mouse_genomes_project 5 35574888 35577333 + Gm20052 lincRNA lincRNA MGP_BALBcJ_T0008082.1 MGP_BALBcJ_G0006585.1 mouse_genomes_project 5 35575235 35577810 + Gm20052 lincRNA lincRNA MGP_BALBcJ_T0008083.1 MGP_BALBcJ_G0006585.1 mouse_genomes_project 5 35575246 35577671 + Gm20052 lincRNA lincRNA MGP_BALBcJ_T0071172.1 MGP_BALBcJ_G0029442.1 mouse_genomes_project 5 32189662 32207744 - MGP_BALBcJ_P0071172 Tnip2 protein_coding protein_coding MGP_BALBcJ_T0071173.1 MGP_BALBcJ_G0029442.1 mouse_genomes_project 5 32189662 32207716 - MGP_BALBcJ_P0071173 Tnip2 protein_coding protein_coding MGP_BALBcJ_T0071174.1 MGP_BALBcJ_G0029442.1 mouse_genomes_project 5 32189705 32207691 - MGP_BALBcJ_P0071174 Tnip2 protein_coding protein_coding MGP_BALBcJ_T0071175.1 MGP_BALBcJ_G0029442.1 mouse_genomes_project 5 32193180 32195194 - Tnip2 protein_coding retained_intron MGP_BALBcJ_T0071176.1 MGP_BALBcJ_G0029442.1 mouse_genomes_project 5 32194747 32207602 - Tnip2 protein_coding retained_intron MGP_BALBcJ_T0071177.1 MGP_BALBcJ_G0029442.1 mouse_genomes_project 5 32196861 32207413 - Tnip2 protein_coding retained_intron MGP_BALBcJ_T0071839.1 MGP_BALBcJ_G0029555.1 mouse_genomes_project 5 63323247 63346424 - MGP_BALBcJ_P0071839 Ugdh protein_coding protein_coding MGP_BALBcJ_T0071840.1 MGP_BALBcJ_G0029555.1 mouse_genomes_project 5 63323250 63335625 - Ugdh protein_coding retained_intron MGP_BALBcJ_T0071841.1 MGP_BALBcJ_G0029555.1 mouse_genomes_project 5 63327694 63332971 - Ugdh protein_coding retained_intron MGP_BALBcJ_T0071842.1 MGP_BALBcJ_G0029555.1 mouse_genomes_project 5 63333516 63338731 - MGP_BALBcJ_P0071842 Ugdh protein_coding protein_coding MGP_BALBcJ_T0074927.1 MGP_BALBcJ_G0030153.1 mouse_genomes_project 5 135035067 135051126 + MGP_BALBcJ_P0074927 Tbl2 protein_coding protein_coding MGP_BALBcJ_T0074928.1 MGP_BALBcJ_G0030153.1 mouse_genomes_project 5 135035096 135045195 + MGP_BALBcJ_P0074928 Tbl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074929.1 MGP_BALBcJ_G0030153.1 mouse_genomes_project 5 135035096 135042967 + MGP_BALBcJ_P0074929 Tbl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074930.1 MGP_BALBcJ_G0030153.1 mouse_genomes_project 5 135035101 135039813 + MGP_BALBcJ_P0074930 Tbl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074931.1 MGP_BALBcJ_G0030153.1 mouse_genomes_project 5 135038128 135043005 + MGP_BALBcJ_P0074931 Tbl2 protein_coding protein_coding MGP_BALBcJ_T0073974.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121096050 121097457 - Trafd1 protein_coding retained_intron MGP_BALBcJ_T0073975.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121096050 121103144 - MGP_BALBcJ_P0073975 Trafd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073976.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121096050 121110243 - MGP_BALBcJ_P0073976 Trafd1 protein_coding protein_coding MGP_BALBcJ_T0073977.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121096055 121110182 - MGP_BALBcJ_P0073977 Trafd1 protein_coding protein_coding MGP_BALBcJ_T0073978.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121096057 121097800 - MGP_BALBcJ_P0073978 Trafd1 protein_coding protein_coding MGP_BALBcJ_T0073979.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121102951 121109736 - MGP_BALBcJ_P0073979 Trafd1 protein_coding protein_coding MGP_BALBcJ_T0073980.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121103197 121110188 - MGP_BALBcJ_P0073980 Trafd1 protein_coding protein_coding MGP_BALBcJ_T0073981.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121103916 121110240 - MGP_BALBcJ_P0073981 Trafd1 protein_coding protein_coding MGP_BALBcJ_T0073982.1 MGP_BALBcJ_G0030001.1 mouse_genomes_project 5 121108480 121109687 - Trafd1 protein_coding processed_transcript MGP_BALBcJ_T0071367.1 MGP_BALBcJ_G0029471.1 mouse_genomes_project 5 34472434 34474929 - MGP_BALBcJ_P0071367 Mrfap1 protein_coding protein_coding MGP_BALBcJ_T0099953.1 MGP_BALBcJ_G0037989.1 mouse_genomes_project 5 102403149 102403320 + Gm25721 snRNA snRNA MGP_BALBcJ_T0008123.1 MGP_BALBcJ_G0006620.1 mouse_genomes_project 5 62245497 62248455 + Gm43838 lincRNA lincRNA MGP_BALBcJ_T0073819.1 MGP_BALBcJ_G0029963.1 mouse_genomes_project 5 116981482 116992085 - Rfc5 protein_coding retained_intron MGP_BALBcJ_T0073820.1 MGP_BALBcJ_G0029963.1 mouse_genomes_project 5 116981482 116992110 - MGP_BALBcJ_P0073820 Rfc5 protein_coding protein_coding MGP_BALBcJ_T0073821.1 MGP_BALBcJ_G0029963.1 mouse_genomes_project 5 116982674 116983909 - Rfc5 protein_coding retained_intron MGP_BALBcJ_T0073822.1 MGP_BALBcJ_G0029963.1 mouse_genomes_project 5 116982898 116983274 - Rfc5 protein_coding retained_intron MGP_BALBcJ_T0073823.1 MGP_BALBcJ_G0029963.1 mouse_genomes_project 5 116984791 116989895 - Rfc5 protein_coding retained_intron MGP_BALBcJ_T0073824.1 MGP_BALBcJ_G0029963.1 mouse_genomes_project 5 116989344 116992108 - MGP_BALBcJ_P0073824 Rfc5 protein_coding protein_coding MGP_BALBcJ_T0004743.1 MGP_BALBcJ_G0004096.1 mouse_genomes_project 5 106363191 106373905 - Gm42902 antisense antisense MGP_BALBcJ_T0001866.1 MGP_BALBcJ_G0001780.1 mouse_genomes_project 5 132351824 132352648 - TEC TEC MGP_BALBcJ_T0074697.1 MGP_BALBcJ_G0030118.1 mouse_genomes_project 5 129880056 129942798 + MGP_BALBcJ_P0074697 Tpst1 protein_coding protein_coding MGP_BALBcJ_T0074698.1 MGP_BALBcJ_G0030118.1 mouse_genomes_project 5 129886112 129942798 + MGP_BALBcJ_P0074698 Tpst1 protein_coding protein_coding MGP_BALBcJ_T0074699.1 MGP_BALBcJ_G0030118.1 mouse_genomes_project 5 129900704 129909084 + MGP_BALBcJ_P0074699 Tpst1 protein_coding protein_coding MGP_BALBcJ_T0074700.1 MGP_BALBcJ_G0030118.1 mouse_genomes_project 5 129941025 129942781 + Tpst1 protein_coding retained_intron MGP_BALBcJ_T0074917.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134972052 135006898 + Mlxipl protein_coding processed_transcript MGP_BALBcJ_T0074918.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990779 135008154 + Mlxipl protein_coding retained_intron MGP_BALBcJ_T0074919.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990790 135008805 + MGP_BALBcJ_P0074919 Mlxipl protein_coding protein_coding MGP_BALBcJ_T0074920.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990792 135023342 + MGP_BALBcJ_P0074920 Mlxipl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074921.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990801 135023342 + MGP_BALBcJ_P0074921 Mlxipl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074922.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990801 135023342 + MGP_BALBcJ_P0074922 Mlxipl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074923.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990801 135023342 + MGP_BALBcJ_P0074923 Mlxipl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074924.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 134990806 135023802 + MGP_BALBcJ_P0074924 Mlxipl protein_coding protein_coding MGP_BALBcJ_T0074925.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 135019029 135020030 + MGP_BALBcJ_P0074925 Mlxipl protein_coding protein_coding MGP_BALBcJ_T0074926.1 MGP_BALBcJ_G0030152.1 mouse_genomes_project 5 135019050 135021158 + MGP_BALBcJ_P0074926 Mlxipl protein_coding protein_coding MGP_BALBcJ_T0015128.1 MGP_BALBcJ_G0013225.1 mouse_genomes_project 5 123260626 123261004 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010695.1 MGP_BALBcJ_G0008820.1 mouse_genomes_project 5 122442217 122442336 + Mir8115 miRNA miRNA MGP_BALBcJ_T0102577.1 MGP_BALBcJ_G0040393.1 mouse_genomes_project 5 108594965 108600710 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102567.1 MGP_BALBcJ_G0040383.1 mouse_genomes_project 5 85163706 85182257 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0072173.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504105 72568078 + MGP_BALBcJ_P0072173 Fip1l1 protein_coding protein_coding MGP_BALBcJ_T0072174.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504127 72568088 + MGP_BALBcJ_P0072174 Fip1l1 protein_coding protein_coding MGP_BALBcJ_T0072175.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504135 72561726 + MGP_BALBcJ_P0072175 Fip1l1 protein_coding protein_coding MGP_BALBcJ_T0072176.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504137 72565433 + MGP_BALBcJ_P0072176 Fip1l1 protein_coding protein_coding MGP_BALBcJ_T0072177.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504140 72509226 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0072178.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504159 72561108 + MGP_BALBcJ_P0072178 Fip1l1 protein_coding protein_coding MGP_BALBcJ_T0072179.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504340 72554841 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0072180.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72504635 72514120 + Fip1l1 protein_coding processed_transcript MGP_BALBcJ_T0072181.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72554146 72561208 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0072182.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72554191 72557633 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0072183.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72555538 72557828 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0072184.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72556212 72561298 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0072189.1 MGP_BALBcJ_G0029610.1 mouse_genomes_project 5 72564007 72565218 + Fip1l1 protein_coding retained_intron MGP_BALBcJ_T0070790.1 MGP_BALBcJ_G0029385.1 mouse_genomes_project 5 28630253 28637483 - MGP_BALBcJ_P0070790 Slc30a3 protein_coding protein_coding MGP_BALBcJ_T0070791.1 MGP_BALBcJ_G0029385.1 mouse_genomes_project 5 28631538 28632483 - MGP_BALBcJ_P0070791 Slc30a3 protein_coding protein_coding MGP_BALBcJ_T0070792.1 MGP_BALBcJ_G0029385.1 mouse_genomes_project 5 28632908 28637595 - MGP_BALBcJ_P0070792 Slc30a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070793.1 MGP_BALBcJ_G0029385.1 mouse_genomes_project 5 28633466 28638889 - MGP_BALBcJ_P0070793 Slc30a3 protein_coding protein_coding MGP_BALBcJ_T0070794.1 MGP_BALBcJ_G0029385.1 mouse_genomes_project 5 28633502 28653847 - MGP_BALBcJ_P0070794 Slc30a3 protein_coding protein_coding MGP_BALBcJ_T0008200.1 MGP_BALBcJ_G0006682.1 mouse_genomes_project 5 98425365 98448588 - Gm43248 lincRNA lincRNA MGP_BALBcJ_T0008201.1 MGP_BALBcJ_G0006682.1 mouse_genomes_project 5 98437028 98448126 - Gm43248 lincRNA lincRNA MGP_BALBcJ_T0001532.1 MGP_BALBcJ_G0001450.1 mouse_genomes_project 5 42143650 42146902 - TEC TEC MGP_BALBcJ_T0018174.1 MGP_BALBcJ_G0015558.1 mouse_genomes_project 5 150326701 150343197 + 4930500F04Rik processed_transcript lincRNA MGP_BALBcJ_T0018175.1 MGP_BALBcJ_G0015558.1 mouse_genomes_project 5 150326919 150343193 + 4930500F04Rik processed_transcript lincRNA MGP_BALBcJ_T0018176.1 MGP_BALBcJ_G0015558.1 mouse_genomes_project 5 150331214 150333321 + 4930500F04Rik processed_transcript retained_intron MGP_BALBcJ_T0004685.1 MGP_BALBcJ_G0004054.1 mouse_genomes_project 5 64085129 64108909 + Gm26725 antisense antisense MGP_BALBcJ_T0001758.1 MGP_BALBcJ_G0001673.1 mouse_genomes_project 5 112112932 112114233 + TEC TEC MGP_BALBcJ_T0101206.1 MGP_BALBcJ_G0039242.1 mouse_genomes_project 5 75690129 75690252 - Gm22011 snoRNA snoRNA MGP_BALBcJ_T0074591.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128559825 128623962 - MGP_BALBcJ_P0074591 Rimbp2 protein_coding protein_coding MGP_BALBcJ_T0074592.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128559829 128623915 - MGP_BALBcJ_P0074592 Rimbp2 protein_coding protein_coding MGP_BALBcJ_T0074593.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128562434 128759200 - MGP_BALBcJ_P0074593 Rimbp2 protein_coding protein_coding MGP_BALBcJ_T0074594.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128562434 128759481 - MGP_BALBcJ_P0074594 Rimbp2 protein_coding protein_coding MGP_BALBcJ_T0074595.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128562715 128759609 - MGP_BALBcJ_P0074595 Rimbp2 protein_coding protein_coding MGP_BALBcJ_T0074596.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128610348 128684187 - MGP_BALBcJ_P0074596 Rimbp2 protein_coding protein_coding MGP_BALBcJ_T0074597.1 MGP_BALBcJ_G0030098.1 mouse_genomes_project 5 128644601 128759178 - Rimbp2 protein_coding processed_transcript MGP_BALBcJ_T0073884.1 MGP_BALBcJ_G0029976.1 mouse_genomes_project 5 120091323 120100766 + MGP_BALBcJ_P0073884 Lhx5 protein_coding protein_coding MGP_BALBcJ_T0014871.1 MGP_BALBcJ_G0012968.1 mouse_genomes_project 5 20072572 20073644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074134.1 MGP_BALBcJ_G0030026.1 mouse_genomes_project 5 122133101 122144176 + MGP_BALBcJ_P0074134 Gpn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074135.1 MGP_BALBcJ_G0030026.1 mouse_genomes_project 5 122133676 122144237 + MGP_BALBcJ_P0074135 Gpn3 protein_coding protein_coding MGP_BALBcJ_T0074136.1 MGP_BALBcJ_G0030026.1 mouse_genomes_project 5 122133752 122140062 + Gpn3 protein_coding retained_intron MGP_BALBcJ_T0074137.1 MGP_BALBcJ_G0030026.1 mouse_genomes_project 5 122135209 122143634 + MGP_BALBcJ_P0074137 Gpn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074138.1 MGP_BALBcJ_G0030026.1 mouse_genomes_project 5 122142602 122144237 + MGP_BALBcJ_P0074138 Gpn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074139.1 MGP_BALBcJ_G0030026.1 mouse_genomes_project 5 122142627 122143867 + MGP_BALBcJ_P0074139 Gpn3 protein_coding protein_coding MGP_BALBcJ_T0004827.1 MGP_BALBcJ_G0004157.1 mouse_genomes_project 5 131777931 131787932 + Gm42439 antisense antisense MGP_BALBcJ_T0004792.1 MGP_BALBcJ_G0004131.1 mouse_genomes_project 5 120443250 120471078 + Gm43069 antisense antisense MGP_BALBcJ_T0008420.1 MGP_BALBcJ_G0006827.1 mouse_genomes_project 5 147167050 147177559 + Gm43741 lincRNA lincRNA MGP_BALBcJ_T0075414.1 MGP_BALBcJ_G0030252.1 mouse_genomes_project 5 138540552 138559700 + MGP_BALBcJ_P0075414 Zfp157 protein_coding protein_coding MGP_BALBcJ_T0075415.1 MGP_BALBcJ_G0030252.1 mouse_genomes_project 5 138540563 138547207 + Zfp157 protein_coding retained_intron MGP_BALBcJ_T0075416.1 MGP_BALBcJ_G0030252.1 mouse_genomes_project 5 138540591 138546283 + Zfp157 protein_coding retained_intron MGP_BALBcJ_T0075417.1 MGP_BALBcJ_G0030252.1 mouse_genomes_project 5 138540595 138547251 + Zfp157 protein_coding retained_intron MGP_BALBcJ_T0075418.1 MGP_BALBcJ_G0030252.1 mouse_genomes_project 5 138540603 138555345 + MGP_BALBcJ_P0075418 Zfp157 protein_coding protein_coding MGP_BALBcJ_T0075419.1 MGP_BALBcJ_G0030252.1 mouse_genomes_project 5 138540624 138555357 + MGP_BALBcJ_P0075419 Zfp157 protein_coding protein_coding MGP_BALBcJ_T0071536.1 MGP_BALBcJ_G0029503.1 mouse_genomes_project 5 41511303 41555572 + MGP_BALBcJ_P0071536 Cd38 protein_coding protein_coding MGP_BALBcJ_T0071537.1 MGP_BALBcJ_G0029503.1 mouse_genomes_project 5 41511620 41512502 + Cd38 protein_coding retained_intron MGP_BALBcJ_T0014998.1 MGP_BALBcJ_G0013095.1 mouse_genomes_project 5 70055564 70056036 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099971.1 MGP_BALBcJ_G0038007.1 mouse_genomes_project 5 124471190 124471288 - Gm24854 snRNA snRNA MGP_BALBcJ_T0101194.1 MGP_BALBcJ_G0039230.1 mouse_genomes_project 5 54488097 54488227 + Gm23896 snoRNA snoRNA MGP_BALBcJ_T0008442.1 MGP_BALBcJ_G0006846.1 mouse_genomes_project 5 149690947 149703836 - Gm29264 lincRNA lincRNA MGP_BALBcJ_T0001745.1 MGP_BALBcJ_G0001660.1 mouse_genomes_project 5 106774724 106776070 - TEC TEC MGP_BALBcJ_T0098968.1 MGP_BALBcJ_G0037015.1 mouse_genomes_project 5 98200136 98200875 - Gm16227 sense_intronic sense_intronic MGP_BALBcJ_T0075102.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136661468 136811315 - MGP_BALBcJ_P0075102 Col26a1 protein_coding protein_coding MGP_BALBcJ_T0075103.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136661468 136811378 - MGP_BALBcJ_P0075103 Col26a1 protein_coding protein_coding MGP_BALBcJ_T0075104.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136662464 136664259 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0075105.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136662783 136667411 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0075106.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136673289 136811104 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0075107.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136674008 136675155 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0075108.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136677737 136811403 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0075109.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136677911 136694588 - Col26a1 protein_coding processed_transcript MGP_BALBcJ_T0075110.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136685462 136810937 - Col26a1 protein_coding processed_transcript MGP_BALBcJ_T0075111.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136761200 136764096 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0075112.1 MGP_BALBcJ_G0030186.1 mouse_genomes_project 5 136761980 136811124 - Col26a1 protein_coding retained_intron MGP_BALBcJ_T0015143.1 MGP_BALBcJ_G0013240.1 mouse_genomes_project 5 137138098 137140128 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015123.1 MGP_BALBcJ_G0013220.1 mouse_genomes_project 5 122012593 122013133 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014978.1 MGP_BALBcJ_G0013075.1 mouse_genomes_project 5 61573878 61574338 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018119.1 MGP_BALBcJ_G0015540.1 mouse_genomes_project 5 63685816 63688700 - N4bp2os processed_transcript antisense MGP_BALBcJ_T0018120.1 MGP_BALBcJ_G0015540.1 mouse_genomes_project 5 63686270 63688191 - N4bp2os processed_transcript antisense MGP_BALBcJ_T0018121.1 MGP_BALBcJ_G0015540.1 mouse_genomes_project 5 63687207 63690277 - N4bp2os processed_transcript retained_intron MGP_BALBcJ_T0071756.1 MGP_BALBcJ_G0029539.1 mouse_genomes_project 5 61528849 61678428 + Nwd2 protein_coding retained_intron MGP_BALBcJ_T0071757.1 MGP_BALBcJ_G0029539.1 mouse_genomes_project 5 61528855 61696266 + MGP_BALBcJ_P0071757 Nwd2 protein_coding protein_coding MGP_BALBcJ_T0071758.1 MGP_BALBcJ_G0029539.1 mouse_genomes_project 5 61529080 61686381 + MGP_BALBcJ_P0071758 Nwd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071759.1 MGP_BALBcJ_G0029539.1 mouse_genomes_project 5 61686195 61696266 + MGP_BALBcJ_P0071759 Nwd2 protein_coding protein_coding MGP_BALBcJ_T0010672.1 MGP_BALBcJ_G0008797.1 mouse_genomes_project 5 75282955 75283037 + Mir5098 miRNA miRNA MGP_BALBcJ_T0074153.1 MGP_BALBcJ_G0030029.1 mouse_genomes_project 5 122209915 122259488 - MGP_BALBcJ_P0074153 Atp2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074154.1 MGP_BALBcJ_G0030029.1 mouse_genomes_project 5 122209916 122259209 - MGP_BALBcJ_P0074154 Atp2a2 protein_coding protein_coding MGP_BALBcJ_T0074155.1 MGP_BALBcJ_G0030029.1 mouse_genomes_project 5 122212742 122259539 - MGP_BALBcJ_P0074155 Atp2a2 protein_coding protein_coding MGP_BALBcJ_T0074156.1 MGP_BALBcJ_G0030029.1 mouse_genomes_project 5 122246213 122258935 - Atp2a2 protein_coding processed_transcript MGP_BALBcJ_T0074157.1 MGP_BALBcJ_G0030029.1 mouse_genomes_project 5 122246266 122258931 - Atp2a2 protein_coding retained_intron MGP_BALBcJ_T0001709.1 MGP_BALBcJ_G0001624.1 mouse_genomes_project 5 89178165 89181298 + TEC TEC MGP_BALBcJ_T0001467.1 MGP_BALBcJ_G0001388.1 mouse_genomes_project 5 18507085 18508032 + TEC TEC MGP_BALBcJ_T0074027.1 MGP_BALBcJ_G0030011.1 mouse_genomes_project 5 121354328 121400380 - MGP_BALBcJ_P0074027 Acad10 protein_coding unknown_likely_coding MGP_BALBcJ_T0074028.1 MGP_BALBcJ_G0030011.1 mouse_genomes_project 5 121354334 121402032 - MGP_BALBcJ_P0074028 Acad10 protein_coding protein_coding MGP_BALBcJ_T0074029.1 MGP_BALBcJ_G0030011.1 mouse_genomes_project 5 121354336 121402067 - MGP_BALBcJ_P0074029 Acad10 protein_coding protein_coding MGP_BALBcJ_T0074030.1 MGP_BALBcJ_G0030011.1 mouse_genomes_project 5 121354337 121372772 - Acad10 protein_coding retained_intron MGP_BALBcJ_T0074031.1 MGP_BALBcJ_G0030011.1 mouse_genomes_project 5 121356918 121402051 - Acad10 protein_coding retained_intron MGP_BALBcJ_T0074003.1 MGP_BALBcJ_G0030007.1 mouse_genomes_project 5 121244615 121275378 - MGP_BALBcJ_P0074003 Gm42878 protein_coding protein_coding MGP_BALBcJ_T0074004.1 MGP_BALBcJ_G0030007.1 mouse_genomes_project 5 121244615 121275378 - MGP_BALBcJ_P0074004 Gm42878 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071154.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029680 32046758 + MGP_BALBcJ_P0071154 Rnf4 protein_coding protein_coding MGP_BALBcJ_T0071155.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029719 32043854 + Rnf4 protein_coding retained_intron MGP_BALBcJ_T0071156.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029771 32046755 + MGP_BALBcJ_P0071156 Rnf4 protein_coding protein_coding MGP_BALBcJ_T0071157.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029781 32043360 + Rnf4 protein_coding processed_transcript MGP_BALBcJ_T0071158.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029808 32040461 + Rnf4 protein_coding retained_intron MGP_BALBcJ_T0071159.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029810 32036022 + Rnf4 protein_coding processed_transcript MGP_BALBcJ_T0071160.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029815 32040753 + Rnf4 protein_coding retained_intron MGP_BALBcJ_T0071161.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32029837 32043195 + Rnf4 protein_coding retained_intron MGP_BALBcJ_T0071162.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32030076 32043357 + MGP_BALBcJ_P0071162 Rnf4 protein_coding protein_coding MGP_BALBcJ_T0071163.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32030323 32046743 + MGP_BALBcJ_P0071163 Rnf4 protein_coding protein_coding MGP_BALBcJ_T0071164.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32030710 32036058 + Rnf4 protein_coding processed_transcript MGP_BALBcJ_T0071165.1 MGP_BALBcJ_G0029440.1 mouse_genomes_project 5 32044443 32048948 + Rnf4 protein_coding retained_intron MGP_BALBcJ_T0008066.1 MGP_BALBcJ_G0006578.1 mouse_genomes_project 5 31626093 31630046 + lincRNA lincRNA MGP_BALBcJ_T0073783.1 MGP_BALBcJ_G0029957.1 mouse_genomes_project 5 116035122 116051288 - MGP_BALBcJ_P0073783 Srrm4 protein_coding protein_coding MGP_BALBcJ_T0073784.1 MGP_BALBcJ_G0029957.1 mouse_genomes_project 5 116035132 116051412 - Srrm4 protein_coding retained_intron MGP_BALBcJ_T0073785.1 MGP_BALBcJ_G0029957.1 mouse_genomes_project 5 116035133 116192350 - MGP_BALBcJ_P0073785 Srrm4 protein_coding protein_coding MGP_BALBcJ_T0073786.1 MGP_BALBcJ_G0029957.1 mouse_genomes_project 5 116074203 116074982 - Srrm4 protein_coding retained_intron MGP_BALBcJ_T0072933.1 MGP_BALBcJ_G0029782.1 mouse_genomes_project 5 102739057 102771635 - MGP_BALBcJ_P0072933 Hsd17b11 protein_coding protein_coding MGP_BALBcJ_T0072934.1 MGP_BALBcJ_G0029782.1 mouse_genomes_project 5 102750884 102771554 - MGP_BALBcJ_P0072934 Hsd17b11 protein_coding protein_coding MGP_BALBcJ_T0004681.1 MGP_BALBcJ_G0004050.1 mouse_genomes_project 5 51207508 51210978 - Gm10441 antisense antisense MGP_BALBcJ_T0074273.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123035776 123111728 + MGP_BALBcJ_P0074273 Wdr66 protein_coding protein_coding MGP_BALBcJ_T0074274.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123036876 123112418 + MGP_BALBcJ_P0074274 Wdr66 protein_coding protein_coding MGP_BALBcJ_T0074275.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123054961 123082534 + Wdr66 protein_coding retained_intron MGP_BALBcJ_T0074276.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123054961 123078566 + MGP_BALBcJ_P0074276 Wdr66 protein_coding protein_coding MGP_BALBcJ_T0074277.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123056823 123082485 + Wdr66 protein_coding retained_intron MGP_BALBcJ_T0074278.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123061397 123062851 + Wdr66 protein_coding retained_intron MGP_BALBcJ_T0074279.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123073172 123111728 + MGP_BALBcJ_P0074279 Wdr66 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074280.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123078652 123111564 + MGP_BALBcJ_P0074280 Wdr66 protein_coding protein_coding MGP_BALBcJ_T0074281.1 MGP_BALBcJ_G0030044.1 mouse_genomes_project 5 123087493 123111583 + Wdr66 protein_coding retained_intron MGP_BALBcJ_T0014966.1 MGP_BALBcJ_G0013063.1 mouse_genomes_project 5 57315685 57316064 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099916.1 MGP_BALBcJ_G0037952.1 mouse_genomes_project 5 32224848 32224953 + Gm22847 snRNA snRNA MGP_BALBcJ_T0071884.1 MGP_BALBcJ_G0029561.1 mouse_genomes_project 5 63790223 63825875 + MGP_BALBcJ_P0071884 Rhoh protein_coding protein_coding MGP_BALBcJ_T0071885.1 MGP_BALBcJ_G0029561.1 mouse_genomes_project 5 63791945 63822618 + MGP_BALBcJ_P0071885 Rhoh protein_coding protein_coding MGP_BALBcJ_T0071886.1 MGP_BALBcJ_G0029561.1 mouse_genomes_project 5 63792518 63796874 + Rhoh protein_coding processed_transcript MGP_BALBcJ_T0071887.1 MGP_BALBcJ_G0029561.1 mouse_genomes_project 5 63792556 63797334 + Rhoh protein_coding retained_intron MGP_BALBcJ_T0071225.1 MGP_BALBcJ_G0029447.1 mouse_genomes_project 5 32354943 32451069 + MGP_BALBcJ_P0071225 Grk4 protein_coding protein_coding MGP_BALBcJ_T0071226.1 MGP_BALBcJ_G0029447.1 mouse_genomes_project 5 32355539 32371874 + MGP_BALBcJ_P0071226 Grk4 protein_coding protein_coding MGP_BALBcJ_T0071227.1 MGP_BALBcJ_G0029447.1 mouse_genomes_project 5 32407043 32441106 + Grk4 protein_coding processed_transcript MGP_BALBcJ_T0071228.1 MGP_BALBcJ_G0029447.1 mouse_genomes_project 5 32440211 32451071 + Grk4 protein_coding processed_transcript MGP_BALBcJ_T0070603.1 MGP_BALBcJ_G0029352.1 mouse_genomes_project 5 26986672 27009525 + MGP_BALBcJ_P0070603 Nom1 protein_coding protein_coding MGP_BALBcJ_T0070604.1 MGP_BALBcJ_G0029352.1 mouse_genomes_project 5 26993324 26998312 + Nom1 protein_coding retained_intron MGP_BALBcJ_T0015011.1 MGP_BALBcJ_G0013108.1 mouse_genomes_project 5 74409734 74409886 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099959.1 MGP_BALBcJ_G0037995.1 mouse_genomes_project 5 110136462 110136569 - Gm22716 snRNA snRNA MGP_BALBcJ_T0004832.1 MGP_BALBcJ_G0004162.1 mouse_genomes_project 5 134865567 134879457 - Wbscr25 antisense antisense MGP_BALBcJ_T0004833.1 MGP_BALBcJ_G0004162.1 mouse_genomes_project 5 134870667 134878614 - Wbscr25 antisense antisense MGP_BALBcJ_T0001559.1 MGP_BALBcJ_G0001477.1 mouse_genomes_project 5 46467668 46472664 - TEC TEC MGP_BALBcJ_T0071269.1 MGP_BALBcJ_G0029453.1 mouse_genomes_project 5 32792353 32806557 - MGP_BALBcJ_P0071269 Lrpap1 protein_coding protein_coding MGP_BALBcJ_T0071270.1 MGP_BALBcJ_G0029453.1 mouse_genomes_project 5 32793921 32803305 - MGP_BALBcJ_P0071270 Lrpap1 protein_coding protein_coding MGP_BALBcJ_T0071271.1 MGP_BALBcJ_G0029453.1 mouse_genomes_project 5 32794147 32806480 - Lrpap1 protein_coding retained_intron MGP_BALBcJ_T0071272.1 MGP_BALBcJ_G0029453.1 mouse_genomes_project 5 32802918 32806487 - Lrpap1 protein_coding retained_intron MGP_BALBcJ_T0071273.1 MGP_BALBcJ_G0029453.1 mouse_genomes_project 5 32803299 32805331 - Lrpap1 protein_coding processed_transcript MGP_BALBcJ_T0008441.1 MGP_BALBcJ_G0006845.1 mouse_genomes_project 5 149687483 149694116 + 2310047D07Rik lincRNA lincRNA MGP_BALBcJ_T0008443.1 MGP_BALBcJ_G0006845.1 mouse_genomes_project 5 149693285 149694098 + 2310047D07Rik lincRNA lincRNA MGP_BALBcJ_T0075274.1 MGP_BALBcJ_G0030218.1 mouse_genomes_project 5 137592637 137626543 - MGP_BALBcJ_P0075274 Agfg2 protein_coding protein_coding MGP_BALBcJ_T0075275.1 MGP_BALBcJ_G0030218.1 mouse_genomes_project 5 137592666 137626497 - MGP_BALBcJ_P0075275 Agfg2 protein_coding protein_coding MGP_BALBcJ_T0075276.1 MGP_BALBcJ_G0030218.1 mouse_genomes_project 5 137592956 137603812 - Agfg2 protein_coding retained_intron MGP_BALBcJ_T0075277.1 MGP_BALBcJ_G0030218.1 mouse_genomes_project 5 137595972 137626543 - MGP_BALBcJ_P0075277 Agfg2 protein_coding protein_coding MGP_BALBcJ_T0075278.1 MGP_BALBcJ_G0030218.1 mouse_genomes_project 5 137597750 137606366 - MGP_BALBcJ_P0075278 Agfg2 protein_coding protein_coding MGP_BALBcJ_T0075279.1 MGP_BALBcJ_G0030218.1 mouse_genomes_project 5 137604859 137626510 - Agfg2 protein_coding retained_intron MGP_BALBcJ_T0075936.1 MGP_BALBcJ_G0030369.1 mouse_genomes_project 5 147681547 147688013 - MGP_BALBcJ_P0075936 Cdx2 protein_coding protein_coding MGP_BALBcJ_T0008308.1 MGP_BALBcJ_G0006750.1 mouse_genomes_project 5 116913663 116916597 - BC051077 lincRNA lincRNA MGP_BALBcJ_T0010645.1 MGP_BALBcJ_G0008770.1 mouse_genomes_project 5 4921919 4922030 + Gm22196 miRNA miRNA MGP_BALBcJ_T0075420.1 MGP_BALBcJ_G0030253.1 mouse_genomes_project 5 138657410 138659483 - MGP_BALBcJ_P0075420 protein_coding protein_coding MGP_BALBcJ_T0074113.1 MGP_BALBcJ_G0030021.1 mouse_genomes_project 5 121996685 122024049 - MGP_BALBcJ_P0074113 Tctn1 protein_coding protein_coding MGP_BALBcJ_T0074114.1 MGP_BALBcJ_G0030021.1 mouse_genomes_project 5 121998587 122023958 - MGP_BALBcJ_P0074114 Tctn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0074115.1 MGP_BALBcJ_G0030021.1 mouse_genomes_project 5 122000386 122024049 - MGP_BALBcJ_P0074115 Tctn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074116.1 MGP_BALBcJ_G0030021.1 mouse_genomes_project 5 122004670 122011270 - Tctn1 protein_coding processed_transcript MGP_BALBcJ_T0074117.1 MGP_BALBcJ_G0030021.1 mouse_genomes_project 5 122007539 122014155 - Tctn1 protein_coding retained_intron MGP_BALBcJ_T0074118.1 MGP_BALBcJ_G0030021.1 mouse_genomes_project 5 122011915 122024004 - Tctn1 protein_coding retained_intron MGP_BALBcJ_T0008053.1 MGP_BALBcJ_G0006568.1 mouse_genomes_project 5 26034248 26048566 + Gm26894 lincRNA lincRNA MGP_BALBcJ_T0073371.1 MGP_BALBcJ_G0029880.1 mouse_genomes_project 5 111790701 111802361 + MGP_BALBcJ_P0073371 Tfip11 protein_coding protein_coding MGP_BALBcJ_T0073372.1 MGP_BALBcJ_G0029880.1 mouse_genomes_project 5 111790764 111796247 + MGP_BALBcJ_P0073372 Tfip11 protein_coding protein_coding MGP_BALBcJ_T0073373.1 MGP_BALBcJ_G0029880.1 mouse_genomes_project 5 111790835 111792527 + MGP_BALBcJ_P0073373 Tfip11 protein_coding protein_coding MGP_BALBcJ_T0073374.1 MGP_BALBcJ_G0029880.1 mouse_genomes_project 5 111799930 111801561 + Tfip11 protein_coding retained_intron MGP_BALBcJ_T0076002.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149310631 149370497 - MGP_BALBcJ_P0076002 Katnal1 protein_coding unknown_likely_coding MGP_BALBcJ_T0076003.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149310638 149370503 - MGP_BALBcJ_P0076003 Katnal1 protein_coding protein_coding MGP_BALBcJ_T0076004.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149314719 149318059 - Katnal1 protein_coding retained_intron MGP_BALBcJ_T0076005.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149324823 149370856 - Katnal1 protein_coding processed_transcript MGP_BALBcJ_T0076006.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149332756 149371175 - MGP_BALBcJ_P0076006 Katnal1 protein_coding protein_coding MGP_BALBcJ_T0076008.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149343926 149370484 - MGP_BALBcJ_P0076008 Katnal1 protein_coding protein_coding MGP_BALBcJ_T0076009.1 MGP_BALBcJ_G0030379.1 mouse_genomes_project 5 149366476 149370521 - Katnal1 protein_coding processed_transcript MGP_BALBcJ_T0004791.1 MGP_BALBcJ_G0004130.1 mouse_genomes_project 5 120289463 120290770 - Gm43579 antisense antisense MGP_BALBcJ_T0015090.1 MGP_BALBcJ_G0013187.1 mouse_genomes_project 5 108052498 108052872 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072947.1 MGP_BALBcJ_G0029787.1 mouse_genomes_project 5 102965998 102977529 + MGP_BALBcJ_P0072947 Dmp1 protein_coding protein_coding MGP_BALBcJ_T0073381.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111807354 111842989 + MGP_BALBcJ_P0073381 Hps4 protein_coding protein_coding MGP_BALBcJ_T0073382.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111807364 111809015 + Hps4 protein_coding processed_transcript MGP_BALBcJ_T0073383.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111807366 111842989 + Hps4 protein_coding retained_intron MGP_BALBcJ_T0073384.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111807366 111842989 + MGP_BALBcJ_P0073384 Hps4 protein_coding protein_coding MGP_BALBcJ_T0073385.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111807371 111809155 + Hps4 protein_coding processed_transcript MGP_BALBcJ_T0073387.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111833314 111834344 + Hps4 protein_coding retained_intron MGP_BALBcJ_T0073388.1 MGP_BALBcJ_G0029882.1 mouse_genomes_project 5 111839909 111842976 + Hps4 protein_coding retained_intron MGP_BALBcJ_T0075886.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146566843 146579577 - MGP_BALBcJ_P0075886 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075887.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146566847 146578864 - MGP_BALBcJ_P0075887 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075888.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146567607 146578939 - MGP_BALBcJ_P0075888 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075889.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146568953 146575628 - MGP_BALBcJ_P0075889 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075890.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146569326 146579440 - MGP_BALBcJ_P0075890 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075891.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146569354 146578898 - MGP_BALBcJ_P0075891 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075892.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146569503 146578911 - MGP_BALBcJ_P0075892 Rnf6 protein_coding protein_coding MGP_BALBcJ_T0075893.1 MGP_BALBcJ_G0030356.1 mouse_genomes_project 5 146575717 146578909 - Rnf6 protein_coding processed_transcript MGP_BALBcJ_T0001757.1 MGP_BALBcJ_G0001672.1 mouse_genomes_project 5 111837158 111837525 - TEC TEC MGP_BALBcJ_T0071229.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32457505 32519829 + Htt protein_coding retained_intron MGP_BALBcJ_T0071230.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32457509 32610278 + MGP_BALBcJ_P0071230 Htt protein_coding protein_coding MGP_BALBcJ_T0071231.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32457526 32510573 + Htt protein_coding retained_intron MGP_BALBcJ_T0071232.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32491655 32494269 + Htt protein_coding retained_intron MGP_BALBcJ_T0071233.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32502591 32507657 + Htt protein_coding retained_intron MGP_BALBcJ_T0071234.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32505872 32508143 + Htt protein_coding retained_intron MGP_BALBcJ_T0071235.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32573181 32580968 + Htt protein_coding retained_intron MGP_BALBcJ_T0071236.1 MGP_BALBcJ_G0029448.1 mouse_genomes_project 5 32582440 32600534 + Htt protein_coding retained_intron MGP_BALBcJ_T0098964.1 MGP_BALBcJ_G0037011.1 mouse_genomes_project 5 42354382 42360476 - Gm3364 sense_intronic sense_intronic MGP_BALBcJ_T0070302.1 MGP_BALBcJ_G0029294.1 mouse_genomes_project 5 18799624 18856307 + MGP_BALBcJ_P0070302 Fam185a protein_coding protein_coding MGP_BALBcJ_T0070303.1 MGP_BALBcJ_G0029294.1 mouse_genomes_project 5 18799667 18808325 + Fam185a protein_coding retained_intron MGP_BALBcJ_T0070304.1 MGP_BALBcJ_G0029294.1 mouse_genomes_project 5 18808459 18854987 + Fam185a protein_coding processed_transcript MGP_BALBcJ_T0101732.1 MGP_BALBcJ_G0039703.1 mouse_genomes_project 5 149610238 149611150 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101733.1 MGP_BALBcJ_G0039703.1 mouse_genomes_project 5 149610569 149611340 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0015022.1 MGP_BALBcJ_G0013119.1 mouse_genomes_project 5 81169345 81169712 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071781.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62690563 62720809 + MGP_BALBcJ_P0071781 Klf3 protein_coding protein_coding MGP_BALBcJ_T0071782.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62690752 62711015 + Klf3 protein_coding retained_intron MGP_BALBcJ_T0071783.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62690797 62710078 + Klf3 protein_coding processed_transcript MGP_BALBcJ_T0071784.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62700240 62717392 + MGP_BALBcJ_P0071784 Klf3 protein_coding protein_coding MGP_BALBcJ_T0071785.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62700241 62707217 + Klf3 protein_coding retained_intron MGP_BALBcJ_T0071786.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62700285 62710149 + MGP_BALBcJ_P0071786 Klf3 protein_coding protein_coding MGP_BALBcJ_T0071787.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62703741 62713336 + Klf3 protein_coding retained_intron MGP_BALBcJ_T0071788.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62710253 62715075 + MGP_BALBcJ_P0071788 Klf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071789.1 MGP_BALBcJ_G0029544.1 mouse_genomes_project 5 62714715 62717460 + MGP_BALBcJ_P0071789 Klf3 protein_coding protein_coding MGP_BALBcJ_T0101228.1 MGP_BALBcJ_G0039264.1 mouse_genomes_project 5 129635689 129635820 + Snora15 snoRNA snoRNA MGP_BALBcJ_T0075487.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139439321 139448704 - MGP_BALBcJ_P0075487 Cox19 protein_coding protein_coding MGP_BALBcJ_T0075488.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139440944 139448648 - Cox19 protein_coding processed_transcript MGP_BALBcJ_T0075489.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139441262 139442698 - Cox19 protein_coding processed_transcript MGP_BALBcJ_T0075490.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139441343 139455238 - MGP_BALBcJ_P0075490 Cox19 protein_coding protein_coding MGP_BALBcJ_T0075491.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139441432 139448596 - MGP_BALBcJ_P0075491 Cox19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075492.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139445486 139448631 - Cox19 protein_coding retained_intron MGP_BALBcJ_T0075493.1 MGP_BALBcJ_G0030266.1 mouse_genomes_project 5 139445655 139448636 - Cox19 protein_coding retained_intron MGP_BALBcJ_T0008110.1 MGP_BALBcJ_G0006608.1 mouse_genomes_project 5 49841278 49857704 - C130083M11Rik lincRNA lincRNA MGP_BALBcJ_T0001440.1 MGP_BALBcJ_G0001361.1 mouse_genomes_project 5 6017453 6017684 + TEC TEC MGP_BALBcJ_T0073945.1 MGP_BALBcJ_G0029992.1 mouse_genomes_project 5 120514934 120525526 + MGP_BALBcJ_P0073945 Oas1f protein_coding protein_coding MGP_BALBcJ_T0073946.1 MGP_BALBcJ_G0029992.1 mouse_genomes_project 5 120515937 120525402 + MGP_BALBcJ_P0073946 Oas1f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073639.1 MGP_BALBcJ_G0029932.1 mouse_genomes_project 5 114654882 114655488 - MGP_BALBcJ_P0073639 Gm10401 protein_coding protein_coding MGP_BALBcJ_T0008076.1 MGP_BALBcJ_G0006583.1 mouse_genomes_project 5 34864301 34875670 + lincRNA lincRNA MGP_BALBcJ_T0008077.1 MGP_BALBcJ_G0006583.1 mouse_genomes_project 5 34867265 34874367 + lincRNA lincRNA MGP_BALBcJ_T0014891.1 MGP_BALBcJ_G0012988.1 mouse_genomes_project 5 23863045 23864858 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072779.1 MGP_BALBcJ_G0029754.1 mouse_genomes_project 5 97904601 97940620 - MGP_BALBcJ_P0072779 protein_coding protein_coding MGP_BALBcJ_T0072780.1 MGP_BALBcJ_G0029754.1 mouse_genomes_project 5 97904601 97940620 - MGP_BALBcJ_P0072780 protein_coding protein_coding MGP_BALBcJ_T0072781.1 MGP_BALBcJ_G0029754.1 mouse_genomes_project 5 97905949 97930548 - MGP_BALBcJ_P0072781 protein_coding protein_coding MGP_BALBcJ_T0072782.1 MGP_BALBcJ_G0029754.1 mouse_genomes_project 5 97914969 97921370 - protein_coding retained_intron MGP_BALBcJ_T0072507.1 MGP_BALBcJ_G0029688.1 mouse_genomes_project 5 87094188 87125080 + Mob1b protein_coding retained_intron MGP_BALBcJ_T0072508.1 MGP_BALBcJ_G0029688.1 mouse_genomes_project 5 87094188 87140139 + MGP_BALBcJ_P0072508 Mob1b protein_coding protein_coding MGP_BALBcJ_T0072509.1 MGP_BALBcJ_G0029688.1 mouse_genomes_project 5 87094204 87133564 + MGP_BALBcJ_P0072509 Mob1b protein_coding protein_coding MGP_BALBcJ_T0072510.1 MGP_BALBcJ_G0029688.1 mouse_genomes_project 5 87094310 87125795 + Mob1b protein_coding retained_intron MGP_BALBcJ_T0071895.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63910264 63921227 - 9130230L23Rik protein_coding retained_intron MGP_BALBcJ_T0071896.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63918835 63936772 - MGP_BALBcJ_P0071896 9130230L23Rik protein_coding protein_coding MGP_BALBcJ_T0071897.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63919182 63931568 - MGP_BALBcJ_P0071897 9130230L23Rik protein_coding protein_coding MGP_BALBcJ_T0071898.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63920310 63922332 - 9130230L23Rik protein_coding retained_intron MGP_BALBcJ_T0071899.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63921345 63932683 - 9130230L23Rik protein_coding retained_intron MGP_BALBcJ_T0071900.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63931027 63936772 - 9130230L23Rik protein_coding retained_intron MGP_BALBcJ_T0071901.1 MGP_BALBcJ_G0029563.1 mouse_genomes_project 5 63932412 63933137 - 9130230L23Rik protein_coding retained_intron MGP_BALBcJ_T0071359.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34306047 34373908 - MGP_BALBcJ_P0071359 D5Ertd579e protein_coding protein_coding MGP_BALBcJ_T0071360.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34307814 34319285 - MGP_BALBcJ_P0071360 D5Ertd579e protein_coding protein_coding MGP_BALBcJ_T0071361.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34321510 34326811 - D5Ertd579e protein_coding processed_transcript MGP_BALBcJ_T0071362.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34323420 34373932 - D5Ertd579e protein_coding retained_intron MGP_BALBcJ_T0071363.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34332619 34373908 - D5Ertd579e protein_coding retained_intron MGP_BALBcJ_T0071364.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34349358 34373995 - MGP_BALBcJ_P0071364 D5Ertd579e protein_coding protein_coding MGP_BALBcJ_T0071365.1 MGP_BALBcJ_G0029469.1 mouse_genomes_project 5 34366984 34373941 - D5Ertd579e protein_coding retained_intron MGP_BALBcJ_T0008165.1 MGP_BALBcJ_G0006653.1 mouse_genomes_project 5 75509191 75517770 + Gm42761 lincRNA lincRNA MGP_BALBcJ_T0004795.1 MGP_BALBcJ_G0004134.1 mouse_genomes_project 5 121463320 121473059 - Gm16552 antisense antisense MGP_BALBcJ_T0015125.1 MGP_BALBcJ_G0013222.1 mouse_genomes_project 5 122195000 122195320 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074704.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 129979920 130028758 + MGP_BALBcJ_P0074704 Rabgef1 protein_coding protein_coding MGP_BALBcJ_T0074705.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 129979946 130024858 + MGP_BALBcJ_P0074705 Rabgef1 protein_coding protein_coding MGP_BALBcJ_T0074706.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130001483 130023168 + MGP_BALBcJ_P0074706 Rabgef1 protein_coding protein_coding MGP_BALBcJ_T0074707.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130001483 130028753 + MGP_BALBcJ_P0074707 Rabgef1 protein_coding protein_coding MGP_BALBcJ_T0074708.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130001530 130021458 + Rabgef1 protein_coding processed_transcript MGP_BALBcJ_T0074709.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130001542 130005644 + Rabgef1 protein_coding retained_intron MGP_BALBcJ_T0074710.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130021420 130025407 + Rabgef1 protein_coding retained_intron MGP_BALBcJ_T0074711.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130025796 130027391 + Rabgef1 protein_coding retained_intron MGP_BALBcJ_T0074712.1 MGP_BALBcJ_G0030120.1 mouse_genomes_project 5 130027581 130028466 + MGP_BALBcJ_P0074712 Rabgef1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070145.1 MGP_BALBcJ_G0029265.1 mouse_genomes_project 5 5497121 5638053 - MGP_BALBcJ_P0070145 Rundc3b protein_coding protein_coding MGP_BALBcJ_T0070146.1 MGP_BALBcJ_G0029265.1 mouse_genomes_project 5 5499054 5638053 - MGP_BALBcJ_P0070146 Rundc3b protein_coding protein_coding MGP_BALBcJ_T0001583.1 MGP_BALBcJ_G0001500.1 mouse_genomes_project 5 49119072 49120866 - TEC TEC MGP_BALBcJ_T0101725.1 MGP_BALBcJ_G0039699.1 mouse_genomes_project 5 84245833 84246833 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101726.1 MGP_BALBcJ_G0039699.1 mouse_genomes_project 5 84245888 84246972 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0075032.1 MGP_BALBcJ_G0030175.1 mouse_genomes_project 5 135957198 135965421 + MGP_BALBcJ_P0075032 Upk3b protein_coding protein_coding MGP_BALBcJ_T0004852.1 MGP_BALBcJ_G0004175.1 mouse_genomes_project 5 140189913 140201351 + Gm16122 antisense antisense MGP_BALBcJ_T0010720.1 MGP_BALBcJ_G0008845.1 mouse_genomes_project 5 141215212 141215291 + Gm26113 miRNA miRNA MGP_BALBcJ_T0001580.1 MGP_BALBcJ_G0001497.1 mouse_genomes_project 5 47711919 47714486 + TEC TEC MGP_BALBcJ_T0070253.1 MGP_BALBcJ_G0029285.1 mouse_genomes_project 5 15634129 15721950 - MGP_BALBcJ_P0070253 Gnai1 protein_coding protein_coding MGP_BALBcJ_T0011571.1 MGP_BALBcJ_G0009696.1 mouse_genomes_project 5 27261123 27261452 + Gm26346 misc_RNA misc_RNA MGP_BALBcJ_T0001577.1 MGP_BALBcJ_G0001494.1 mouse_genomes_project 5 47084545 47087814 - TEC TEC MGP_BALBcJ_T0075064.1 MGP_BALBcJ_G0030180.1 mouse_genomes_project 5 136059970 136064337 + MGP_BALBcJ_P0075064 Alkbh4 protein_coding protein_coding MGP_BALBcJ_T0075065.1 MGP_BALBcJ_G0030180.1 mouse_genomes_project 5 136059978 136065437 + MGP_BALBcJ_P0075065 Alkbh4 protein_coding protein_coding MGP_BALBcJ_T0075066.1 MGP_BALBcJ_G0030180.1 mouse_genomes_project 5 136059982 136064603 + MGP_BALBcJ_P0075066 Alkbh4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075067.1 MGP_BALBcJ_G0030180.1 mouse_genomes_project 5 136060026 136064328 + MGP_BALBcJ_P0075067 Alkbh4 protein_coding protein_coding MGP_BALBcJ_T0075068.1 MGP_BALBcJ_G0030180.1 mouse_genomes_project 5 136062605 136065440 + MGP_BALBcJ_P0075068 Alkbh4 protein_coding protein_coding MGP_BALBcJ_T0098990.1 MGP_BALBcJ_G0037033.1 mouse_genomes_project 5 151058407 151062455 + Gm42531 sense_intronic sense_intronic MGP_BALBcJ_T0008124.1 MGP_BALBcJ_G0006621.1 mouse_genomes_project 5 62268577 62271643 + Gm43837 lincRNA lincRNA MGP_BALBcJ_T0001845.1 MGP_BALBcJ_G0001759.1 mouse_genomes_project 5 131423947 131425698 - TEC TEC MGP_BALBcJ_T0101234.1 MGP_BALBcJ_G0039270.1 mouse_genomes_project 5 151209613 151209732 - Gm26013 snoRNA snoRNA MGP_BALBcJ_T0004752.1 MGP_BALBcJ_G0004105.1 mouse_genomes_project 5 109899396 109901354 + Gm42596 antisense antisense MGP_BALBcJ_T0071050.1 MGP_BALBcJ_G0029423.1 mouse_genomes_project 5 31106356 31109599 - MGP_BALBcJ_P0071050 Nkx1-1 protein_coding protein_coding MGP_BALBcJ_T0070531.1 MGP_BALBcJ_G0029337.1 mouse_genomes_project 5 22716583 22716889 - MGP_BALBcJ_P0070531 E130116L18Rik protein_coding protein_coding MGP_BALBcJ_T0075851.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145380838 145397355 + MGP_BALBcJ_P0075851 Cpsf4 protein_coding protein_coding MGP_BALBcJ_T0075852.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145380849 145397355 + MGP_BALBcJ_P0075852 Cpsf4 protein_coding protein_coding MGP_BALBcJ_T0075853.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145380872 145397354 + MGP_BALBcJ_P0075853 Cpsf4 protein_coding protein_coding MGP_BALBcJ_T0075854.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145380879 145397067 + MGP_BALBcJ_P0075854 Cpsf4 protein_coding protein_coding MGP_BALBcJ_T0075855.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145380896 145396546 + MGP_BALBcJ_P0075855 Cpsf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075856.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145381083 145396667 + MGP_BALBcJ_P0075856 Cpsf4 protein_coding protein_coding MGP_BALBcJ_T0075857.1 MGP_BALBcJ_G0030346.1 mouse_genomes_project 5 145385908 145397355 + Cpsf4 protein_coding retained_intron MGP_BALBcJ_T0099970.1 MGP_BALBcJ_G0038006.1 mouse_genomes_project 5 123414975 123415122 + Gm24840 snRNA snRNA MGP_BALBcJ_T0014883.1 MGP_BALBcJ_G0012980.1 mouse_genomes_project 5 21719708 21720362 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074384.1 MGP_BALBcJ_G0030062.1 mouse_genomes_project 5 123803858 123831763 - MGP_BALBcJ_P0074384 Vps37b protein_coding protein_coding MGP_BALBcJ_T0074385.1 MGP_BALBcJ_G0030062.1 mouse_genomes_project 5 123805355 123810931 - Vps37b protein_coding processed_transcript MGP_BALBcJ_T0074386.1 MGP_BALBcJ_G0030062.1 mouse_genomes_project 5 123827244 123831751 - Vps37b protein_coding processed_transcript MGP_BALBcJ_T0001527.1 MGP_BALBcJ_G0001445.1 mouse_genomes_project 5 41591831 41592373 - TEC TEC MGP_BALBcJ_T0071304.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458437 33587533 + MGP_BALBcJ_P0071304 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071305.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458437 33587026 + MGP_BALBcJ_P0071305 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071306.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458481 33586709 + MGP_BALBcJ_P0071306 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071307.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458488 33587533 + MGP_BALBcJ_P0071307 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071308.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458488 33587025 + MGP_BALBcJ_P0071308 Ablim2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071309.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458523 33587026 + MGP_BALBcJ_P0071309 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071310.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33458608 33585979 + MGP_BALBcJ_P0071310 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071311.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33514870 33545161 + MGP_BALBcJ_P0071311 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071312.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33514937 33585979 + MGP_BALBcJ_P0071312 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071313.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33514951 33535058 + MGP_BALBcJ_P0071313 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071314.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33529686 33577452 + MGP_BALBcJ_P0071314 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071315.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33529717 33543484 + Ablim2 protein_coding retained_intron MGP_BALBcJ_T0071316.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33529717 33560208 + MGP_BALBcJ_P0071316 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071317.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33543304 33560535 + MGP_BALBcJ_P0071317 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0071318.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33551162 33572030 + Ablim2 protein_coding retained_intron MGP_BALBcJ_T0071319.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33559414 33560535 + Ablim2 protein_coding retained_intron MGP_BALBcJ_T0071320.1 MGP_BALBcJ_G0029461.1 mouse_genomes_project 5 33560242 33586079 + MGP_BALBcJ_P0071320 Ablim2 protein_coding protein_coding MGP_BALBcJ_T0014868.1 MGP_BALBcJ_G0012965.1 mouse_genomes_project 5 19657723 19658095 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076113.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151172078 151309483 + MGP_BALBcJ_P0076113 Pds5b protein_coding protein_coding MGP_BALBcJ_T0076114.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151172078 151310308 + MGP_BALBcJ_P0076114 Pds5b protein_coding protein_coding MGP_BALBcJ_T0076115.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151172166 151310285 + MGP_BALBcJ_P0076115 Pds5b protein_coding protein_coding MGP_BALBcJ_T0076116.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151247567 151248359 + Pds5b protein_coding retained_intron MGP_BALBcJ_T0076117.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151256009 151297160 + MGP_BALBcJ_P0076117 Pds5b protein_coding protein_coding MGP_BALBcJ_T0076118.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151259065 151269567 + Pds5b protein_coding processed_transcript MGP_BALBcJ_T0076119.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151293278 151299449 + Pds5b protein_coding processed_transcript MGP_BALBcJ_T0076120.1 MGP_BALBcJ_G0030395.1 mouse_genomes_project 5 151304846 151310098 + Pds5b protein_coding retained_intron MGP_BALBcJ_T0008162.1 MGP_BALBcJ_G0006650.1 mouse_genomes_project 5 75140277 75142059 - Gm42757 lincRNA lincRNA MGP_BALBcJ_T0004703.1 MGP_BALBcJ_G0004069.1 mouse_genomes_project 5 73120274 73120874 - Gm42802 antisense antisense MGP_BALBcJ_T0074876.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810476 134820812 + MGP_BALBcJ_P0074876 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074877.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810481 134819898 + MGP_BALBcJ_P0074877 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074878.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810481 134819898 + MGP_BALBcJ_P0074878 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074879.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810493 134819898 + MGP_BALBcJ_P0074879 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074880.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810500 134819377 + MGP_BALBcJ_P0074880 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074881.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810514 134812533 + MGP_BALBcJ_P0074881 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074882.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810632 134818809 + MGP_BALBcJ_P0074882 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0074883.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134810892 134815383 + Wbscr27 protein_coding processed_transcript MGP_BALBcJ_T0074884.1 MGP_BALBcJ_G0030144.1 mouse_genomes_project 5 134818636 134819407 + MGP_BALBcJ_P0074884 Wbscr27 protein_coding protein_coding MGP_BALBcJ_T0011580.1 MGP_BALBcJ_G0009705.1 mouse_genomes_project 5 99150363 99150501 + Gm28030 misc_RNA misc_RNA MGP_BALBcJ_T0001898.1 MGP_BALBcJ_G0001811.1 mouse_genomes_project 5 147811688 147812739 + TEC TEC MGP_BALBcJ_T0070441.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21909732 21913522 + MGP_BALBcJ_P0070441 Slc4a2 protein_coding protein_coding MGP_BALBcJ_T0070442.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21909748 21916059 + Slc4a2 protein_coding processed_transcript MGP_BALBcJ_T0070443.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21909754 21915792 + MGP_BALBcJ_P0070443 Slc4a2 protein_coding protein_coding MGP_BALBcJ_T0070444.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21912740 21915762 + MGP_BALBcJ_P0070444 Slc4a2 protein_coding protein_coding MGP_BALBcJ_T0070445.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21913432 21926856 + MGP_BALBcJ_P0070445 Slc4a2 protein_coding protein_coding MGP_BALBcJ_T0070446.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21914117 21926853 + MGP_BALBcJ_P0070446 Slc4a2 protein_coding protein_coding MGP_BALBcJ_T0070447.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21914172 21915748 + Slc4a2 protein_coding processed_transcript MGP_BALBcJ_T0070448.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21914332 21926853 + MGP_BALBcJ_P0070448 Slc4a2 protein_coding protein_coding MGP_BALBcJ_T0070449.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21914927 21915689 + Slc4a2 protein_coding retained_intron MGP_BALBcJ_T0070450.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21917245 21920262 + Slc4a2 protein_coding retained_intron MGP_BALBcJ_T0070451.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21921454 21922397 + Slc4a2 protein_coding retained_intron MGP_BALBcJ_T0070452.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21922669 21925162 + Slc4a2 protein_coding retained_intron MGP_BALBcJ_T0070455.1 MGP_BALBcJ_G0029320.1 mouse_genomes_project 5 21925651 21926478 + Slc4a2 protein_coding retained_intron MGP_BALBcJ_T0075203.1 MGP_BALBcJ_G0030206.1 mouse_genomes_project 5 137432202 137433190 - MGP_BALBcJ_P0075203 Pop7 protein_coding protein_coding MGP_BALBcJ_T0075204.1 MGP_BALBcJ_G0030206.1 mouse_genomes_project 5 137432203 137433283 - MGP_BALBcJ_P0075204 Pop7 protein_coding protein_coding MGP_BALBcJ_T0010664.1 MGP_BALBcJ_G0008789.1 mouse_genomes_project 5 61988829 61988925 - Gm22395 miRNA miRNA MGP_BALBcJ_T0014953.1 MGP_BALBcJ_G0013050.1 mouse_genomes_project 5 52706028 52706857 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008327.1 MGP_BALBcJ_G0006766.1 mouse_genomes_project 5 119993551 120000016 - Gm42654 lincRNA lincRNA MGP_BALBcJ_T0008328.1 MGP_BALBcJ_G0006766.1 mouse_genomes_project 5 119993559 119996607 - Gm42654 lincRNA lincRNA MGP_BALBcJ_T0101198.1 MGP_BALBcJ_G0039234.1 mouse_genomes_project 5 58528869 58528992 - Gm23708 snoRNA snoRNA MGP_BALBcJ_T0075644.1 MGP_BALBcJ_G0030304.1 mouse_genomes_project 5 143048474 143076623 - MGP_BALBcJ_P0075644 Fbxl18 protein_coding protein_coding MGP_BALBcJ_T0075645.1 MGP_BALBcJ_G0030304.1 mouse_genomes_project 5 143053240 143054349 - Fbxl18 protein_coding retained_intron MGP_BALBcJ_T0075646.1 MGP_BALBcJ_G0030304.1 mouse_genomes_project 5 143053253 143076440 - MGP_BALBcJ_P0075646 Fbxl18 protein_coding protein_coding MGP_BALBcJ_T0075647.1 MGP_BALBcJ_G0030304.1 mouse_genomes_project 5 143053516 143053958 - Fbxl18 protein_coding processed_transcript MGP_BALBcJ_T0075648.1 MGP_BALBcJ_G0030304.1 mouse_genomes_project 5 143063527 143076623 - Fbxl18 protein_coding retained_intron MGP_BALBcJ_T0072036.1 MGP_BALBcJ_G0029584.1 mouse_genomes_project 5 69337390 69440596 - protein_coding processed_transcript MGP_BALBcJ_T0072037.1 MGP_BALBcJ_G0029584.1 mouse_genomes_project 5 69337545 69337777 - protein_coding transcribed_processed_pseudogene MGP_BALBcJ_T0001447.1 MGP_BALBcJ_G0001368.1 mouse_genomes_project 5 10759055 10762962 + TEC TEC MGP_BALBcJ_T0071593.1 MGP_BALBcJ_G0029513.1 mouse_genomes_project 5 43316340 43347192 + MGP_BALBcJ_P0071593 Ncapg protein_coding protein_coding MGP_BALBcJ_T0071594.1 MGP_BALBcJ_G0029513.1 mouse_genomes_project 5 43322562 43346771 + Ncapg protein_coding retained_intron MGP_BALBcJ_T0071595.1 MGP_BALBcJ_G0029513.1 mouse_genomes_project 5 43324413 43326581 + Ncapg protein_coding retained_intron MGP_BALBcJ_T0071596.1 MGP_BALBcJ_G0029513.1 mouse_genomes_project 5 43324464 43346717 + Ncapg protein_coding retained_intron MGP_BALBcJ_T0071597.1 MGP_BALBcJ_G0029513.1 mouse_genomes_project 5 43338670 43343566 + Ncapg protein_coding retained_intron MGP_BALBcJ_T0071600.1 MGP_BALBcJ_G0029513.1 mouse_genomes_project 5 43345303 43346714 + Ncapg protein_coding retained_intron MGP_BALBcJ_T0072423.1 MGP_BALBcJ_G0029662.1 mouse_genomes_project 5 85736037 85769094 - MGP_BALBcJ_P0072423 Sult1b1 protein_coding protein_coding MGP_BALBcJ_T0072424.1 MGP_BALBcJ_G0029662.1 mouse_genomes_project 5 85736064 85767109 - MGP_BALBcJ_P0072424 Sult1b1 protein_coding protein_coding MGP_BALBcJ_T0072425.1 MGP_BALBcJ_G0029662.1 mouse_genomes_project 5 85737387 85766033 - MGP_BALBcJ_P0072425 Sult1b1 protein_coding protein_coding MGP_BALBcJ_T0073688.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114993238 115013282 + Msi1 protein_coding retained_intron MGP_BALBcJ_T0073689.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114993287 115020360 + MGP_BALBcJ_P0073689 Msi1 protein_coding protein_coding MGP_BALBcJ_T0073690.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114994479 115015244 + MGP_BALBcJ_P0073690 Msi1 protein_coding protein_coding MGP_BALBcJ_T0073691.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114997291 114999543 + Msi1 protein_coding retained_intron MGP_BALBcJ_T0073692.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114997642 115015237 + Msi1 protein_coding retained_intron MGP_BALBcJ_T0073693.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114998191 115009413 + Msi1 protein_coding retained_intron MGP_BALBcJ_T0073694.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114998887 115015221 + MGP_BALBcJ_P0073694 Msi1 protein_coding protein_coding MGP_BALBcJ_T0073695.1 MGP_BALBcJ_G0029944.1 mouse_genomes_project 5 114999389 115009632 + Msi1 protein_coding retained_intron MGP_BALBcJ_T0075149.1 MGP_BALBcJ_G0030195.1 mouse_genomes_project 5 137039302 137050698 - MGP_BALBcJ_P0075149 Trim56 protein_coding protein_coding MGP_BALBcJ_T0075150.1 MGP_BALBcJ_G0030195.1 mouse_genomes_project 5 137048514 137050700 - MGP_BALBcJ_P0075150 Trim56 protein_coding protein_coding MGP_BALBcJ_T0014930.1 MGP_BALBcJ_G0013027.1 mouse_genomes_project 5 37048083 37048982 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098978.1 MGP_BALBcJ_G0037024.1 mouse_genomes_project 5 130953796 130958487 - Gm43166 sense_intronic sense_intronic MGP_BALBcJ_T0014854.1 MGP_BALBcJ_G0012951.1 mouse_genomes_project 5 16876986 16878655 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074551.1 MGP_BALBcJ_G0030088.1 mouse_genomes_project 5 125180306 125200589 - MGP_BALBcJ_P0074551 Dhx37 protein_coding protein_coding MGP_BALBcJ_T0074552.1 MGP_BALBcJ_G0030088.1 mouse_genomes_project 5 125181239 125182349 - MGP_BALBcJ_P0074552 Dhx37 protein_coding protein_coding MGP_BALBcJ_T0074553.1 MGP_BALBcJ_G0030088.1 mouse_genomes_project 5 125182751 125185301 - Dhx37 protein_coding retained_intron MGP_BALBcJ_T0074554.1 MGP_BALBcJ_G0030088.1 mouse_genomes_project 5 125190014 125193203 - MGP_BALBcJ_P0074554 Dhx37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072410.1 MGP_BALBcJ_G0029653.1 mouse_genomes_project 5 85094926 85104854 - MGP_BALBcJ_P0072410 Ugt2b1 protein_coding protein_coding MGP_BALBcJ_T0004689.1 MGP_BALBcJ_G0004057.1 mouse_genomes_project 5 64935337 64935888 - Gm15949 antisense antisense MGP_BALBcJ_T0004666.1 MGP_BALBcJ_G0004039.1 mouse_genomes_project 5 41743692 41745767 + Gm16401 antisense antisense MGP_BALBcJ_T0004667.1 MGP_BALBcJ_G0004039.1 mouse_genomes_project 5 41743692 41745765 + Gm16401 antisense antisense MGP_BALBcJ_T0099926.1 MGP_BALBcJ_G0037962.1 mouse_genomes_project 5 64098626 64098733 - Gm22929 snRNA snRNA MGP_BALBcJ_T0072677.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90894888 90930566 + MGP_BALBcJ_P0072677 Fam47e protein_coding protein_coding MGP_BALBcJ_T0072678.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90894921 90930466 + MGP_BALBcJ_P0072678 Fam47e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072679.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90911293 90930688 + MGP_BALBcJ_P0072679 Fam47e protein_coding protein_coding MGP_BALBcJ_T0072680.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90911352 90931084 + MGP_BALBcJ_P0072680 Fam47e protein_coding protein_coding MGP_BALBcJ_T0072681.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90911353 90931085 + MGP_BALBcJ_P0072681 Fam47e protein_coding protein_coding MGP_BALBcJ_T0072682.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90911359 90925186 + MGP_BALBcJ_P0072682 Fam47e protein_coding protein_coding MGP_BALBcJ_T0072683.1 MGP_BALBcJ_G0029729.1 mouse_genomes_project 5 90911372 90930537 + MGP_BALBcJ_P0072683 Fam47e protein_coding protein_coding MGP_BALBcJ_T0098991.1 MGP_BALBcJ_G0037034.1 mouse_genomes_project 5 151251799 151253580 + Gm43807 sense_intronic sense_intronic MGP_BALBcJ_T0001597.1 MGP_BALBcJ_G0001514.1 mouse_genomes_project 5 52503189 52505880 + TEC TEC MGP_BALBcJ_T0008325.1 MGP_BALBcJ_G0006764.1 mouse_genomes_project 5 119559765 119563906 + lincRNA lincRNA MGP_BALBcJ_T0072549.1 MGP_BALBcJ_G0029697.1 mouse_genomes_project 5 88818344 88833377 + MGP_BALBcJ_P0072549 Alb protein_coding protein_coding MGP_BALBcJ_T0072550.1 MGP_BALBcJ_G0029697.1 mouse_genomes_project 5 88819766 88820170 + Alb protein_coding processed_transcript MGP_BALBcJ_T0072551.1 MGP_BALBcJ_G0029697.1 mouse_genomes_project 5 88820147 88831436 + Alb protein_coding processed_transcript MGP_BALBcJ_T0001810.1 MGP_BALBcJ_G0001725.1 mouse_genomes_project 5 122803261 122806084 + TEC TEC MGP_BALBcJ_T0101713.1 MGP_BALBcJ_G0039690.1 mouse_genomes_project 5 48312848 48315901 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0008133.1 MGP_BALBcJ_G0006627.1 mouse_genomes_project 5 62508335 62510115 + Gm42565 lincRNA lincRNA MGP_BALBcJ_T0001522.1 MGP_BALBcJ_G0001440.1 mouse_genomes_project 5 41221835 41223942 + TEC TEC MGP_BALBcJ_T0075055.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136046556 136059899 - MGP_BALBcJ_P0075055 Lrwd1 protein_coding protein_coding MGP_BALBcJ_T0075056.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136046851 136059826 - Lrwd1 protein_coding retained_intron MGP_BALBcJ_T0075057.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136046859 136049344 - Lrwd1 protein_coding retained_intron MGP_BALBcJ_T0075058.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136047476 136054077 - MGP_BALBcJ_P0075058 Lrwd1 protein_coding protein_coding MGP_BALBcJ_T0075059.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136053185 136059847 - Lrwd1 protein_coding retained_intron MGP_BALBcJ_T0075060.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136054507 136059827 - Lrwd1 protein_coding retained_intron MGP_BALBcJ_T0075061.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136055499 136059887 - Lrwd1 protein_coding retained_intron MGP_BALBcJ_T0075062.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136056131 136057702 - Lrwd1 protein_coding retained_intron MGP_BALBcJ_T0075063.1 MGP_BALBcJ_G0030179.1 mouse_genomes_project 5 136056856 136059822 - MGP_BALBcJ_P0075063 Lrwd1 protein_coding protein_coding MGP_BALBcJ_T0008381.1 MGP_BALBcJ_G0006795.1 mouse_genomes_project 5 129200049 129201209 + Gm43001 lincRNA lincRNA MGP_BALBcJ_T0008382.1 MGP_BALBcJ_G0006795.1 mouse_genomes_project 5 129200607 129201120 + Gm43001 lincRNA lincRNA MGP_BALBcJ_T0072386.1 MGP_BALBcJ_G0029645.1 mouse_genomes_project 5 84481639 84507441 - MGP_BALBcJ_P0072386 Tmprss11d protein_coding protein_coding MGP_BALBcJ_T0072387.1 MGP_BALBcJ_G0029645.1 mouse_genomes_project 5 84481639 84551179 - MGP_BALBcJ_P0072387 Tmprss11d protein_coding protein_coding MGP_BALBcJ_T0008096.1 MGP_BALBcJ_G0006596.1 mouse_genomes_project 5 41020815 41024000 + Gm43699 lincRNA lincRNA MGP_BALBcJ_T0102575.1 MGP_BALBcJ_G0040391.1 mouse_genomes_project 5 94498406 94500896 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0071058.1 MGP_BALBcJ_G0029425.1 mouse_genomes_project 5 31311213 31313381 + MGP_BALBcJ_P0071058 Gm9903 protein_coding protein_coding MGP_BALBcJ_T0015113.1 MGP_BALBcJ_G0013210.1 mouse_genomes_project 5 114760252 114760615 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008194.1 MGP_BALBcJ_G0006678.1 mouse_genomes_project 5 97225686 97238999 - 1700010H22Rik lincRNA lincRNA MGP_BALBcJ_T0008195.1 MGP_BALBcJ_G0006678.1 mouse_genomes_project 5 97234840 97239077 - 1700010H22Rik lincRNA lincRNA MGP_BALBcJ_T0008196.1 MGP_BALBcJ_G0006678.1 mouse_genomes_project 5 97236261 97238835 - 1700010H22Rik lincRNA lincRNA MGP_BALBcJ_T0098378.1 MGP_BALBcJ_G0036432.1 mouse_genomes_project 5 121609996 121610412 - pseudogene pseudogene MGP_BALBcJ_T0070739.1 MGP_BALBcJ_G0029377.1 mouse_genomes_project 5 28456712 28464595 + MGP_BALBcJ_P0070739 Emilin1 protein_coding protein_coding MGP_BALBcJ_T0070740.1 MGP_BALBcJ_G0029377.1 mouse_genomes_project 5 28457049 28464184 + Emilin1 protein_coding retained_intron MGP_BALBcJ_T0070741.1 MGP_BALBcJ_G0029377.1 mouse_genomes_project 5 28463239 28464368 + Emilin1 protein_coding retained_intron MGP_BALBcJ_T0072957.1 MGP_BALBcJ_G0029791.1 mouse_genomes_project 5 103218779 103261895 + MGP_BALBcJ_P0072957 Pkd2 protein_coding protein_coding MGP_BALBcJ_T0072958.1 MGP_BALBcJ_G0029791.1 mouse_genomes_project 5 103218899 103246108 + Pkd2 protein_coding processed_transcript MGP_BALBcJ_T0072959.1 MGP_BALBcJ_G0029791.1 mouse_genomes_project 5 103248558 103257420 + Pkd2 protein_coding retained_intron MGP_BALBcJ_T0014959.1 MGP_BALBcJ_G0013056.1 mouse_genomes_project 5 55003788 55005138 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073087.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106713052 106792630 - MGP_BALBcJ_P0073087 protein_coding unknown_likely_coding MGP_BALBcJ_T0073088.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106715537 106778145 - protein_coding retained_intron MGP_BALBcJ_T0073089.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106732876 106767917 - protein_coding retained_intron MGP_BALBcJ_T0073090.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106781849 106851549 - MGP_BALBcJ_P0073090 protein_coding protein_coding MGP_BALBcJ_T0073091.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106783523 106785172 - protein_coding retained_intron MGP_BALBcJ_T0073092.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106783835 106857414 - MGP_BALBcJ_P0073092 protein_coding protein_coding MGP_BALBcJ_T0073093.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106783973 106857399 - protein_coding processed_transcript MGP_BALBcJ_T0073094.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106788018 106805898 - protein_coding retained_intron MGP_BALBcJ_T0073095.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106790043 106851280 - protein_coding processed_transcript MGP_BALBcJ_T0073097.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106819249 106857411 - protein_coding processed_transcript MGP_BALBcJ_T0073098.1 MGP_BALBcJ_G0029821.1 mouse_genomes_project 5 106854984 106857407 - protein_coding processed_transcript MGP_BALBcJ_T0102576.1 MGP_BALBcJ_G0040392.1 mouse_genomes_project 5 98926127 99074026 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015038.1 MGP_BALBcJ_G0013135.1 mouse_genomes_project 5 86575116 86575495 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008064.1 MGP_BALBcJ_G0006576.1 mouse_genomes_project 5 30964773 30982636 - Gm20465 lincRNA lincRNA MGP_BALBcJ_T0008385.1 MGP_BALBcJ_G0006798.1 mouse_genomes_project 5 132363669 132368263 + Gm42626 lincRNA lincRNA MGP_BALBcJ_T0001779.1 MGP_BALBcJ_G0001694.1 mouse_genomes_project 5 116736938 116739560 + TEC TEC MGP_BALBcJ_T0073267.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109732727 109784188 + MGP_BALBcJ_P0073267 Pole protein_coding protein_coding MGP_BALBcJ_T0073268.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109732762 109737657 + MGP_BALBcJ_P0073268 Pole protein_coding protein_coding MGP_BALBcJ_T0073269.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109732798 109754390 + Pole protein_coding retained_intron MGP_BALBcJ_T0073270.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109764048 109766170 + Pole protein_coding retained_intron MGP_BALBcJ_T0073271.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109774441 109784165 + Pole protein_coding retained_intron MGP_BALBcJ_T0073272.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109777512 109784167 + MGP_BALBcJ_P0073272 Pole protein_coding protein_coding MGP_BALBcJ_T0073273.1 MGP_BALBcJ_G0029861.1 mouse_genomes_project 5 109780172 109784150 + Pole protein_coding retained_intron MGP_BALBcJ_T0075765.1 MGP_BALBcJ_G0030329.1 mouse_genomes_project 5 144126054 144153211 - MGP_BALBcJ_P0075765 Ccz1 protein_coding protein_coding MGP_BALBcJ_T0075766.1 MGP_BALBcJ_G0030329.1 mouse_genomes_project 5 144129620 144130730 - Ccz1 protein_coding processed_transcript MGP_BALBcJ_T0075767.1 MGP_BALBcJ_G0030329.1 mouse_genomes_project 5 144130623 144142311 - Ccz1 protein_coding retained_intron MGP_BALBcJ_T0075768.1 MGP_BALBcJ_G0030329.1 mouse_genomes_project 5 144147442 144153235 - Ccz1 protein_coding retained_intron MGP_BALBcJ_T0075769.1 MGP_BALBcJ_G0030329.1 mouse_genomes_project 5 144150855 144153235 - Ccz1 protein_coding retained_intron MGP_BALBcJ_T0074627.1 MGP_BALBcJ_G0030103.1 mouse_genomes_project 5 129423325 129450129 + MGP_BALBcJ_P0074627 Mmp17 protein_coding protein_coding MGP_BALBcJ_T0074628.1 MGP_BALBcJ_G0030103.1 mouse_genomes_project 5 129435785 129441642 + Mmp17 protein_coding retained_intron MGP_BALBcJ_T0015183.1 MGP_BALBcJ_G0013280.1 mouse_genomes_project 5 146606786 146607658 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014864.1 MGP_BALBcJ_G0012961.1 mouse_genomes_project 5 19065765 19066400 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004840.1 MGP_BALBcJ_G0004168.1 mouse_genomes_project 5 136197848 136341129 + Gm16599 antisense antisense MGP_BALBcJ_T0001844.1 MGP_BALBcJ_G0001758.1 mouse_genomes_project 5 130867069 130868704 - TEC TEC MGP_BALBcJ_T0015122.1 MGP_BALBcJ_G0013219.1 mouse_genomes_project 5 121260500 121260833 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073498.1 MGP_BALBcJ_G0029905.1 mouse_genomes_project 5 113522934 113588713 - MGP_BALBcJ_P0073498 Svop protein_coding protein_coding MGP_BALBcJ_T0073499.1 MGP_BALBcJ_G0029905.1 mouse_genomes_project 5 113524147 113563461 - Svop protein_coding processed_transcript MGP_BALBcJ_T0073500.1 MGP_BALBcJ_G0029905.1 mouse_genomes_project 5 113530885 113540507 - Svop protein_coding retained_intron MGP_BALBcJ_T0073501.1 MGP_BALBcJ_G0029905.1 mouse_genomes_project 5 113551388 113588523 - Svop protein_coding retained_intron MGP_BALBcJ_T0073502.1 MGP_BALBcJ_G0029905.1 mouse_genomes_project 5 113552155 113588510 - MGP_BALBcJ_P0073502 Svop protein_coding protein_coding MGP_BALBcJ_T0075391.1 MGP_BALBcJ_G0030247.1 mouse_genomes_project 5 138328400 138336314 - MGP_BALBcJ_P0075391 Gal3st4 protein_coding protein_coding MGP_BALBcJ_T0075392.1 MGP_BALBcJ_G0030247.1 mouse_genomes_project 5 138328404 138336228 - MGP_BALBcJ_P0075392 Gal3st4 protein_coding protein_coding MGP_BALBcJ_T0075393.1 MGP_BALBcJ_G0030247.1 mouse_genomes_project 5 138328417 138336275 - Gal3st4 protein_coding processed_transcript MGP_BALBcJ_T0075394.1 MGP_BALBcJ_G0030247.1 mouse_genomes_project 5 138328417 138336275 - MGP_BALBcJ_P0075394 Gal3st4 protein_coding protein_coding MGP_BALBcJ_T0075396.1 MGP_BALBcJ_G0030247.1 mouse_genomes_project 5 138334466 138336223 - MGP_BALBcJ_P0075396 Gal3st4 protein_coding protein_coding MGP_BALBcJ_T0075881.1 MGP_BALBcJ_G0030353.1 mouse_genomes_project 5 145670643 145699126 - MGP_BALBcJ_P0075881 Cyp3a16 protein_coding protein_coding MGP_BALBcJ_T0004683.1 MGP_BALBcJ_G0004052.1 mouse_genomes_project 5 61806617 61807687 + Gm15819 antisense antisense MGP_BALBcJ_T0071371.1 MGP_BALBcJ_G0029473.1 mouse_genomes_project 5 34548386 34635684 + MGP_BALBcJ_P0071371 Ppp2r2c protein_coding protein_coding MGP_BALBcJ_T0071372.1 MGP_BALBcJ_G0029473.1 mouse_genomes_project 5 34548536 34610250 + MGP_BALBcJ_P0071372 Ppp2r2c protein_coding protein_coding MGP_BALBcJ_T0071373.1 MGP_BALBcJ_G0029473.1 mouse_genomes_project 5 34619276 34620034 + Ppp2r2c protein_coding processed_transcript MGP_BALBcJ_T0102568.1 MGP_BALBcJ_G0040384.1 mouse_genomes_project 5 85246069 85247132 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0073317.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110235962 110242259 - MGP_BALBcJ_P0073317 Pus1 protein_coding protein_coding MGP_BALBcJ_T0073318.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110235962 110242951 - MGP_BALBcJ_P0073318 Pus1 protein_coding protein_coding MGP_BALBcJ_T0073319.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110235962 110242888 - MGP_BALBcJ_P0073319 Pus1 protein_coding protein_coding MGP_BALBcJ_T0073320.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110235962 110242888 - MGP_BALBcJ_P0073320 Pus1 protein_coding protein_coding MGP_BALBcJ_T0073321.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110235963 110242907 - MGP_BALBcJ_P0073321 Pus1 protein_coding protein_coding MGP_BALBcJ_T0073322.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110237831 110242438 - MGP_BALBcJ_P0073322 Pus1 protein_coding protein_coding MGP_BALBcJ_T0073323.1 MGP_BALBcJ_G0029869.1 mouse_genomes_project 5 110237840 110242883 - MGP_BALBcJ_P0073323 Pus1 protein_coding protein_coding MGP_BALBcJ_T0008134.1 MGP_BALBcJ_G0006628.1 mouse_genomes_project 5 62572188 62575250 - Gm26761 lincRNA lincRNA MGP_BALBcJ_T0074407.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123921576 124022963 - MGP_BALBcJ_P0074407 Pitpnm2 protein_coding protein_coding MGP_BALBcJ_T0074408.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123921576 124056247 - MGP_BALBcJ_P0074408 Pitpnm2 protein_coding protein_coding MGP_BALBcJ_T0074409.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123921577 124056008 - MGP_BALBcJ_P0074409 Pitpnm2 protein_coding protein_coding MGP_BALBcJ_T0074410.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123922633 123990052 - MGP_BALBcJ_P0074410 Pitpnm2 protein_coding protein_coding MGP_BALBcJ_T0074411.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123923180 123927428 - Pitpnm2 protein_coding retained_intron MGP_BALBcJ_T0074412.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123923961 123924987 - Pitpnm2 protein_coding retained_intron MGP_BALBcJ_T0074413.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123928090 123929507 - Pitpnm2 protein_coding retained_intron MGP_BALBcJ_T0074414.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123935677 123992617 - MGP_BALBcJ_P0074414 Pitpnm2 protein_coding protein_coding MGP_BALBcJ_T0074415.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123935850 123943133 - Pitpnm2 protein_coding retained_intron MGP_BALBcJ_T0074416.1 MGP_BALBcJ_G0030066.1 mouse_genomes_project 5 123946475 123987988 - MGP_BALBcJ_P0074416 Pitpnm2 protein_coding protein_coding MGP_BALBcJ_T0072421.1 MGP_BALBcJ_G0029661.1 mouse_genomes_project 5 85678603 85706941 - MGP_BALBcJ_P0072421 protein_coding protein_coding MGP_BALBcJ_T0074370.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123728333 123768922 + MGP_BALBcJ_P0074370 Ccdc62 protein_coding protein_coding MGP_BALBcJ_T0074371.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123728343 123737963 + Ccdc62 protein_coding retained_intron MGP_BALBcJ_T0074372.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123728343 123768922 + MGP_BALBcJ_P0074372 Ccdc62 protein_coding protein_coding MGP_BALBcJ_T0074373.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123728353 123767245 + MGP_BALBcJ_P0074373 Ccdc62 protein_coding unknown_likely_coding MGP_BALBcJ_T0074374.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123745100 123753267 + Ccdc62 protein_coding processed_transcript MGP_BALBcJ_T0074375.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123753244 123756362 + Ccdc62 protein_coding retained_intron MGP_BALBcJ_T0074376.1 MGP_BALBcJ_G0030060.1 mouse_genomes_project 5 123761268 123765741 + Ccdc62 protein_coding retained_intron MGP_BALBcJ_T0008156.1 MGP_BALBcJ_G0006645.1 mouse_genomes_project 5 73829308 73833025 - Gm28865 lincRNA lincRNA MGP_BALBcJ_T0011584.1 MGP_BALBcJ_G0009709.1 mouse_genomes_project 5 110734298 110734409 - Gm27602 misc_RNA misc_RNA MGP_BALBcJ_T0074364.1 MGP_BALBcJ_G0030058.1 mouse_genomes_project 5 123705084 123726463 + MGP_BALBcJ_P0074364 Denr protein_coding protein_coding MGP_BALBcJ_T0074365.1 MGP_BALBcJ_G0030058.1 mouse_genomes_project 5 123705178 123706418 + Denr protein_coding processed_transcript MGP_BALBcJ_T0074366.1 MGP_BALBcJ_G0030058.1 mouse_genomes_project 5 123705184 123709147 + Denr protein_coding retained_intron MGP_BALBcJ_T0074367.1 MGP_BALBcJ_G0030058.1 mouse_genomes_project 5 123705191 123706398 + Denr protein_coding retained_intron MGP_BALBcJ_T0074368.1 MGP_BALBcJ_G0030058.1 mouse_genomes_project 5 123705398 123724763 + MGP_BALBcJ_P0074368 Denr protein_coding protein_coding MGP_BALBcJ_T0014841.1 MGP_BALBcJ_G0012938.1 mouse_genomes_project 5 9934920 9936494 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001568.1 MGP_BALBcJ_G0001485.1 mouse_genomes_project 5 46690069 46691401 - TEC TEC MGP_BALBcJ_T0015112.1 MGP_BALBcJ_G0013209.1 mouse_genomes_project 5 114603671 114604043 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014884.1 MGP_BALBcJ_G0012981.1 mouse_genomes_project 5 21727907 21729444 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071683.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50440209 50493027 + Zcchc4 protein_coding processed_transcript MGP_BALBcJ_T0071684.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50447882 50492770 + MGP_BALBcJ_P0071684 Zcchc4 protein_coding protein_coding MGP_BALBcJ_T0071685.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50447882 50493864 + MGP_BALBcJ_P0071685 Zcchc4 protein_coding protein_coding MGP_BALBcJ_T0071686.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50447914 50469262 + Zcchc4 protein_coding retained_intron MGP_BALBcJ_T0071687.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50447944 50465193 + MGP_BALBcJ_P0071687 Zcchc4 protein_coding protein_coding MGP_BALBcJ_T0071688.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50447950 50465225 + Zcchc4 protein_coding processed_transcript MGP_BALBcJ_T0071689.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50467123 50488383 + Zcchc4 protein_coding processed_transcript MGP_BALBcJ_T0071690.1 MGP_BALBcJ_G0029526.1 mouse_genomes_project 5 50473384 50485072 + Zcchc4 protein_coding retained_intron MGP_BALBcJ_T0072750.1 MGP_BALBcJ_G0029743.1 mouse_genomes_project 5 95654867 95750442 + MGP_BALBcJ_P0072750 Bmp2k protein_coding protein_coding MGP_BALBcJ_T0072751.1 MGP_BALBcJ_G0029743.1 mouse_genomes_project 5 95654867 95727252 + MGP_BALBcJ_P0072751 Bmp2k protein_coding protein_coding MGP_BALBcJ_T0073401.1 MGP_BALBcJ_G0029887.1 mouse_genomes_project 5 112163827 112375372 - MGP_BALBcJ_P0073401 Myo18b protein_coding protein_coding MGP_BALBcJ_T0073402.1 MGP_BALBcJ_G0029887.1 mouse_genomes_project 5 112163829 112242963 - Myo18b protein_coding processed_transcript MGP_BALBcJ_T0073403.1 MGP_BALBcJ_G0029887.1 mouse_genomes_project 5 112249613 112350389 - Myo18b protein_coding processed_transcript MGP_BALBcJ_T0073404.1 MGP_BALBcJ_G0029887.1 mouse_genomes_project 5 112293477 112351299 - MGP_BALBcJ_P0073404 Myo18b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101187.1 MGP_BALBcJ_G0039223.1 mouse_genomes_project 5 18493278 18493397 - Gm22490 snoRNA snoRNA MGP_BALBcJ_T0008071.1 MGP_BALBcJ_G0006581.1 mouse_genomes_project 5 33081731 33091052 - E130018O15Rik lincRNA lincRNA MGP_BALBcJ_T0001667.1 MGP_BALBcJ_G0001583.1 mouse_genomes_project 5 66011405 66013527 - TEC TEC MGP_BALBcJ_T0074759.1 MGP_BALBcJ_G0030129.1 mouse_genomes_project 5 133928960 133974351 + MGP_BALBcJ_P0074759 Gatsl2 protein_coding protein_coding MGP_BALBcJ_T0074760.1 MGP_BALBcJ_G0030129.1 mouse_genomes_project 5 133929496 133974338 + Gatsl2 protein_coding processed_transcript MGP_BALBcJ_T0074761.1 MGP_BALBcJ_G0030129.1 mouse_genomes_project 5 133964926 133967515 + Gatsl2 protein_coding retained_intron MGP_BALBcJ_T0075297.1 MGP_BALBcJ_G0030222.1 mouse_genomes_project 5 137744124 137748882 - MGP_BALBcJ_P0075297 Mepce protein_coding protein_coding MGP_BALBcJ_T0075298.1 MGP_BALBcJ_G0030222.1 mouse_genomes_project 5 137744647 137748934 - MGP_BALBcJ_P0075298 Mepce protein_coding protein_coding MGP_BALBcJ_T0075299.1 MGP_BALBcJ_G0030222.1 mouse_genomes_project 5 137744701 137745569 - Mepce protein_coding retained_intron MGP_BALBcJ_T0075300.1 MGP_BALBcJ_G0030222.1 mouse_genomes_project 5 137745348 137749874 - MGP_BALBcJ_P0075300 Mepce protein_coding protein_coding MGP_BALBcJ_T0075301.1 MGP_BALBcJ_G0030222.1 mouse_genomes_project 5 137747104 137748910 - Mepce protein_coding processed_transcript MGP_BALBcJ_T0001473.1 MGP_BALBcJ_G0001394.1 mouse_genomes_project 5 21935513 21937615 - TEC TEC MGP_BALBcJ_T0001474.1 MGP_BALBcJ_G0001394.1 mouse_genomes_project 5 21937079 21937613 - TEC TEC MGP_BALBcJ_T0001650.1 MGP_BALBcJ_G0001566.1 mouse_genomes_project 5 64372054 64374264 - TEC TEC MGP_BALBcJ_T0070495.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22081245 22092407 - Smarcd3 protein_coding retained_intron MGP_BALBcJ_T0070496.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22083049 22115169 - MGP_BALBcJ_P0070496 Smarcd3 protein_coding protein_coding MGP_BALBcJ_T0070497.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22083049 22092443 - MGP_BALBcJ_P0070497 Smarcd3 protein_coding protein_coding MGP_BALBcJ_T0070499.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22085122 22087277 - Smarcd3 protein_coding retained_intron MGP_BALBcJ_T0070500.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22085591 22092366 - Smarcd3 protein_coding retained_intron MGP_BALBcJ_T0070501.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22086162 22089367 - Smarcd3 protein_coding retained_intron MGP_BALBcJ_T0070502.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22086173 22087417 - Smarcd3 protein_coding retained_intron MGP_BALBcJ_T0070503.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22086294 22092331 - Smarcd3 protein_coding retained_intron MGP_BALBcJ_T0070504.1 MGP_BALBcJ_G0029329.1 mouse_genomes_project 5 22113283 22113894 - Smarcd3 protein_coding processed_transcript MGP_BALBcJ_T0004639.1 MGP_BALBcJ_G0004017.1 mouse_genomes_project 5 28360691 28365327 - Gm15461 antisense antisense MGP_BALBcJ_T0075940.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147813013 147934065 + MGP_BALBcJ_P0075940 Pan3 protein_coding protein_coding MGP_BALBcJ_T0075941.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147813305 147934059 + MGP_BALBcJ_P0075941 Pan3 protein_coding protein_coding MGP_BALBcJ_T0075942.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147813748 147838977 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075943.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147813748 147837367 + Pan3 protein_coding processed_transcript MGP_BALBcJ_T0075944.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147813748 147912740 + MGP_BALBcJ_P0075944 Pan3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075945.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147833999 147873609 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075946.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147834003 147931547 + MGP_BALBcJ_P0075946 Pan3 protein_coding protein_coding MGP_BALBcJ_T0075947.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147834003 147931547 + MGP_BALBcJ_P0075947 Pan3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075948.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147834083 147912363 + MGP_BALBcJ_P0075948 Pan3 protein_coding protein_coding MGP_BALBcJ_T0075949.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147835485 147837745 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075950.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147836893 147877674 + Pan3 protein_coding processed_transcript MGP_BALBcJ_T0075951.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147836924 147934059 + MGP_BALBcJ_P0075951 Pan3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075952.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147903033 147906802 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075953.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147904817 147912393 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075954.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147905218 147934059 + MGP_BALBcJ_P0075954 Pan3 protein_coding protein_coding MGP_BALBcJ_T0075955.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147911805 147912721 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075956.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147915413 147934051 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075957.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147915618 147917373 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075958.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147915694 147918982 + Pan3 protein_coding processed_transcript MGP_BALBcJ_T0075959.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147917028 147918927 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075960.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147921930 147928735 + Pan3 protein_coding retained_intron MGP_BALBcJ_T0075961.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147922822 147931278 + Pan3 protein_coding processed_transcript MGP_BALBcJ_T0075962.1 MGP_BALBcJ_G0030372.1 mouse_genomes_project 5 147924883 147934056 + MGP_BALBcJ_P0075962 Pan3 protein_coding protein_coding MGP_BALBcJ_T0098608.1 MGP_BALBcJ_G0036662.1 mouse_genomes_project 5 34774191 34774294 - Gm25551 rRNA rRNA MGP_BALBcJ_T0001762.1 MGP_BALBcJ_G0001677.1 mouse_genomes_project 5 112650125 112651046 - TEC TEC MGP_BALBcJ_T0076105.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151105430 151144959 - N4bp2l2 protein_coding processed_transcript MGP_BALBcJ_T0076106.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151133378 151163916 - MGP_BALBcJ_P0076106 N4bp2l2 protein_coding protein_coding MGP_BALBcJ_T0076107.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151138142 151145701 - N4bp2l2 protein_coding retained_intron MGP_BALBcJ_T0076108.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151140406 151159793 - MGP_BALBcJ_P0076108 N4bp2l2 protein_coding protein_coding MGP_BALBcJ_T0076109.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151140419 151145233 - N4bp2l2 protein_coding retained_intron MGP_BALBcJ_T0076110.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151145649 151163881 - N4bp2l2 protein_coding retained_intron MGP_BALBcJ_T0076111.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151160722 151163652 - MGP_BALBcJ_P0076111 N4bp2l2 protein_coding protein_coding MGP_BALBcJ_T0076112.1 MGP_BALBcJ_G0030394.1 mouse_genomes_project 5 151163480 151164487 - N4bp2l2 protein_coding retained_intron MGP_BALBcJ_T0074538.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125040280 125106846 - MGP_BALBcJ_P0074538 Scarb1 protein_coding protein_coding MGP_BALBcJ_T0074539.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125040282 125106823 - MGP_BALBcJ_P0074539 Scarb1 protein_coding protein_coding MGP_BALBcJ_T0074540.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125040759 125057748 - MGP_BALBcJ_P0074540 Scarb1 protein_coding protein_coding MGP_BALBcJ_T0074541.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125040980 125047802 - Scarb1 protein_coding processed_transcript MGP_BALBcJ_T0074542.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125046592 125050318 - Scarb1 protein_coding retained_intron MGP_BALBcJ_T0074543.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125046997 125106771 - Scarb1 protein_coding retained_intron MGP_BALBcJ_T0074544.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125062370 125069703 - Scarb1 protein_coding retained_intron MGP_BALBcJ_T0074545.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125065502 125081814 - Scarb1 protein_coding processed_transcript MGP_BALBcJ_T0074546.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125068349 125105751 - MGP_BALBcJ_P0074546 Scarb1 protein_coding protein_coding MGP_BALBcJ_T0074547.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125069409 125091448 - Scarb1 protein_coding processed_transcript MGP_BALBcJ_T0074548.1 MGP_BALBcJ_G0030085.1 mouse_genomes_project 5 125090441 125092909 - Scarb1 protein_coding retained_intron MGP_BALBcJ_T0011593.1 MGP_BALBcJ_G0009718.1 mouse_genomes_project 5 134037341 134037629 + Gm24139 misc_RNA misc_RNA MGP_BALBcJ_T0014949.1 MGP_BALBcJ_G0013046.1 mouse_genomes_project 5 48675243 48675724 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008366.1 MGP_BALBcJ_G0006787.1 mouse_genomes_project 5 126888377 126889165 + Gm43475 lincRNA lincRNA MGP_BALBcJ_T0008432.1 MGP_BALBcJ_G0006838.1 mouse_genomes_project 5 149402181 149404931 + Gm15409 lincRNA lincRNA MGP_BALBcJ_T0008028.1 MGP_BALBcJ_G0006554.1 mouse_genomes_project 5 19921776 19929723 + lincRNA lincRNA MGP_BALBcJ_T0008029.1 MGP_BALBcJ_G0006554.1 mouse_genomes_project 5 19921783 20203747 + lincRNA lincRNA MGP_BALBcJ_T0008030.1 MGP_BALBcJ_G0006554.1 mouse_genomes_project 5 19925467 19928916 + lincRNA lincRNA MGP_BALBcJ_T0001661.1 MGP_BALBcJ_G0001577.1 mouse_genomes_project 5 65539806 65540415 - TEC TEC MGP_BALBcJ_T0099922.1 MGP_BALBcJ_G0037958.1 mouse_genomes_project 5 53029664 53029827 - Gm24977 snRNA snRNA MGP_BALBcJ_T0001781.1 MGP_BALBcJ_G0001696.1 mouse_genomes_project 5 117484118 117484225 + TEC TEC MGP_BALBcJ_T0099962.1 MGP_BALBcJ_G0037998.1 mouse_genomes_project 5 113420693 113420774 - Gm22056 snRNA snRNA MGP_BALBcJ_T0001561.1 MGP_BALBcJ_G0001479.1 mouse_genomes_project 5 46592261 46596048 - TEC TEC MGP_BALBcJ_T0001562.1 MGP_BALBcJ_G0001479.1 mouse_genomes_project 5 46595168 46595542 - TEC pseudogene MGP_BALBcJ_T0070246.1 MGP_BALBcJ_G0029283.1 mouse_genomes_project 5 15141157 15210017 - MGP_BALBcJ_P0070246 Cd36 protein_coding protein_coding MGP_BALBcJ_T0070247.1 MGP_BALBcJ_G0029283.1 mouse_genomes_project 5 15141483 15195429 - MGP_BALBcJ_P0070247 Cd36 protein_coding protein_coding MGP_BALBcJ_T0070248.1 MGP_BALBcJ_G0029283.1 mouse_genomes_project 5 15141834 15253694 - MGP_BALBcJ_P0070248 Cd36 protein_coding protein_coding MGP_BALBcJ_T0070249.1 MGP_BALBcJ_G0029283.1 mouse_genomes_project 5 15141836 15209954 - MGP_BALBcJ_P0070249 Cd36 protein_coding protein_coding MGP_BALBcJ_T0070250.1 MGP_BALBcJ_G0029283.1 mouse_genomes_project 5 15141953 15195450 - MGP_BALBcJ_P0070250 Cd36 protein_coding protein_coding MGP_BALBcJ_T0070251.1 MGP_BALBcJ_G0029283.1 mouse_genomes_project 5 15174891 15253748 - MGP_BALBcJ_P0070251 Cd36 protein_coding protein_coding MGP_BALBcJ_T0075014.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135878248 135892631 - MGP_BALBcJ_P0075014 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0075015.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135878260 135892597 - MGP_BALBcJ_P0075015 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0075016.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135878261 135880366 - MGP_BALBcJ_P0075016 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0075017.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135878864 135880314 - MGP_BALBcJ_P0075017 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0075018.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135881226 135883902 - MGP_BALBcJ_P0075018 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0075019.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135881436 135886006 - MGP_BALBcJ_P0075019 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0075020.1 MGP_BALBcJ_G0030172.1 mouse_genomes_project 5 135884166 135892540 - MGP_BALBcJ_P0075020 Ssc4d protein_coding protein_coding MGP_BALBcJ_T0099056.1 MGP_BALBcJ_G0037093.1 mouse_genomes_project 5 123305479 123311114 + Gm15751 sense_overlapping sense_overlapping MGP_BALBcJ_T0011590.1 MGP_BALBcJ_G0009715.1 mouse_genomes_project 5 117830867 117831157 - Gm24050 misc_RNA misc_RNA MGP_BALBcJ_T0102558.1 MGP_BALBcJ_G0040374.1 mouse_genomes_project 5 358354 358531 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0074701.1 MGP_BALBcJ_G0030119.1 mouse_genomes_project 5 129952258 129963210 + MGP_BALBcJ_P0074701 Kctd7 protein_coding protein_coding MGP_BALBcJ_T0074702.1 MGP_BALBcJ_G0030119.1 mouse_genomes_project 5 129952321 129959136 + MGP_BALBcJ_P0074702 Kctd7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074703.1 MGP_BALBcJ_G0030119.1 mouse_genomes_project 5 129952501 129959898 + MGP_BALBcJ_P0074703 Kctd7 protein_coding protein_coding MGP_BALBcJ_T0073634.1 MGP_BALBcJ_G0029931.1 mouse_genomes_project 5 114560133 114655983 + MGP_BALBcJ_P0073634 Sppl3 protein_coding protein_coding MGP_BALBcJ_T0073635.1 MGP_BALBcJ_G0029931.1 mouse_genomes_project 5 114560142 114611796 + Sppl3 protein_coding processed_transcript MGP_BALBcJ_T0073636.1 MGP_BALBcJ_G0029931.1 mouse_genomes_project 5 114560490 114635376 + MGP_BALBcJ_P0073636 Sppl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073637.1 MGP_BALBcJ_G0029931.1 mouse_genomes_project 5 114624851 114627357 + Sppl3 protein_coding retained_intron MGP_BALBcJ_T0073638.1 MGP_BALBcJ_G0029931.1 mouse_genomes_project 5 114651950 114655448 + Sppl3 protein_coding retained_intron MGP_BALBcJ_T0099912.1 MGP_BALBcJ_G0037948.1 mouse_genomes_project 5 28053035 28053142 - Gm25666 snRNA snRNA MGP_BALBcJ_T0071860.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63520313 63616553 - MGP_BALBcJ_P0071860 Pds5a protein_coding protein_coding MGP_BALBcJ_T0071861.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63520315 63527893 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071862.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63522361 63536564 - MGP_BALBcJ_P0071862 Pds5a protein_coding protein_coding MGP_BALBcJ_T0071863.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63524074 63616239 - MGP_BALBcJ_P0071863 Pds5a protein_coding unknown_likely_coding MGP_BALBcJ_T0071864.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63531210 63616241 - MGP_BALBcJ_P0071864 Pds5a protein_coding protein_coding MGP_BALBcJ_T0071865.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63531366 63538512 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071866.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63538833 63566672 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071867.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63538848 63544847 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071868.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63539317 63545865 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071869.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63539790 63546296 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071870.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63553996 63555171 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071871.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63558336 63561357 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071872.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63562214 63616658 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071873.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63570329 63571479 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0071874.1 MGP_BALBcJ_G0029559.1 mouse_genomes_project 5 63583251 63615250 - Pds5a protein_coding retained_intron MGP_BALBcJ_T0015035.1 MGP_BALBcJ_G0013132.1 mouse_genomes_project 5 86348381 86350239 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101214.1 MGP_BALBcJ_G0039250.1 mouse_genomes_project 5 91416007 91416143 + Gm22915 snoRNA snoRNA MGP_BALBcJ_T0074777.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072380 134155221 - MGP_BALBcJ_P0074777 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074778.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072383 134155172 - MGP_BALBcJ_P0074778 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074779.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072383 134155172 - MGP_BALBcJ_P0074779 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074780.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072385 134155172 - MGP_BALBcJ_P0074780 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074781.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072388 134130794 - MGP_BALBcJ_P0074781 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074782.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072388 134130794 - MGP_BALBcJ_P0074782 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074783.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072388 134130794 - MGP_BALBcJ_P0074783 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074784.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072388 134155172 - MGP_BALBcJ_P0074784 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074785.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072388 134130794 - MGP_BALBcJ_P0074785 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074786.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134072389 134114886 - Gtf2i protein_coding processed_transcript MGP_BALBcJ_T0074787.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134073043 134078109 - MGP_BALBcJ_P0074787 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074788.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134073389 134076958 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0074789.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134074059 134130742 - MGP_BALBcJ_P0074789 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074790.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134074201 134075592 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0074791.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134075183 134079299 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0074792.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134077298 134078291 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0074793.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134090234 134107442 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0074794.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134090260 134130692 - MGP_BALBcJ_P0074794 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074795.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134092456 134093785 - Gtf2i protein_coding processed_transcript MGP_BALBcJ_T0074796.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134093550 134100608 - Gtf2i protein_coding processed_transcript MGP_BALBcJ_T0074797.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134098008 134109848 - Gtf2i protein_coding processed_transcript MGP_BALBcJ_T0074798.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134121975 134154958 - MGP_BALBcJ_P0074798 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074799.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134122006 134152321 - MGP_BALBcJ_P0074799 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074800.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134122006 134152616 - MGP_BALBcJ_P0074800 Gtf2i protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074801.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134122032 134155172 - MGP_BALBcJ_P0074801 Gtf2i protein_coding protein_coding MGP_BALBcJ_T0074802.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134122086 134155172 - MGP_BALBcJ_P0074802 Gtf2i protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074803.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134124292 134147203 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0074804.1 MGP_BALBcJ_G0030133.1 mouse_genomes_project 5 134130144 134132308 - Gtf2i protein_coding retained_intron MGP_BALBcJ_T0076032.1 MGP_BALBcJ_G0030385.1 mouse_genomes_project 5 149886352 149924036 + MGP_BALBcJ_P0076032 Tex26 protein_coding protein_coding MGP_BALBcJ_T0076033.1 MGP_BALBcJ_G0030385.1 mouse_genomes_project 5 149886374 149887694 + Tex26 protein_coding processed_transcript MGP_BALBcJ_T0076034.1 MGP_BALBcJ_G0030385.1 mouse_genomes_project 5 149886398 149924036 + MGP_BALBcJ_P0076034 Tex26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076035.1 MGP_BALBcJ_G0030385.1 mouse_genomes_project 5 149886407 149923948 + MGP_BALBcJ_P0076035 Tex26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076036.1 MGP_BALBcJ_G0030385.1 mouse_genomes_project 5 149886411 149923948 + MGP_BALBcJ_P0076036 Tex26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076037.1 MGP_BALBcJ_G0030385.1 mouse_genomes_project 5 149886419 149923854 + MGP_BALBcJ_P0076037 Tex26 protein_coding protein_coding MGP_BALBcJ_T0098622.1 MGP_BALBcJ_G0036676.1 mouse_genomes_project 5 149184082 149184200 - n-R5s179 rRNA rRNA MGP_BALBcJ_T0015169.1 MGP_BALBcJ_G0013266.1 mouse_genomes_project 5 144590530 144590743 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072315.1 MGP_BALBcJ_G0029635.1 mouse_genomes_project 5 75322482 75362182 + MGP_BALBcJ_P0072315 Polr2b protein_coding protein_coding MGP_BALBcJ_T0072316.1 MGP_BALBcJ_G0029635.1 mouse_genomes_project 5 75322826 75325607 + Polr2b protein_coding retained_intron MGP_BALBcJ_T0072317.1 MGP_BALBcJ_G0029635.1 mouse_genomes_project 5 75338845 75340064 + Polr2b protein_coding retained_intron MGP_BALBcJ_T0072318.1 MGP_BALBcJ_G0029635.1 mouse_genomes_project 5 75353278 75355839 + Polr2b protein_coding retained_intron MGP_BALBcJ_T0073206.1 MGP_BALBcJ_G0029844.1 mouse_genomes_project 5 108153539 108165716 - MGP_BALBcJ_P0073206 protein_coding protein_coding MGP_BALBcJ_T0101233.1 MGP_BALBcJ_G0039269.1 mouse_genomes_project 5 149595715 149595813 + Gm23362 snoRNA snoRNA MGP_BALBcJ_T0015058.1 MGP_BALBcJ_G0013155.1 mouse_genomes_project 5 97706847 97707267 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071598.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43343816 43514713 - MGP_BALBcJ_P0071598 Lcorl protein_coding protein_coding MGP_BALBcJ_T0071599.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43343819 43514565 - MGP_BALBcJ_P0071599 Lcorl protein_coding protein_coding MGP_BALBcJ_T0071601.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43347095 43509864 - MGP_BALBcJ_P0071601 Lcorl protein_coding protein_coding MGP_BALBcJ_T0071602.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43348097 43369947 - Lcorl protein_coding processed_transcript MGP_BALBcJ_T0071603.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43366309 43374222 - Lcorl protein_coding retained_intron MGP_BALBcJ_T0071604.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43380101 43514595 - MGP_BALBcJ_P0071604 Lcorl protein_coding protein_coding MGP_BALBcJ_T0071605.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43393889 43514565 - MGP_BALBcJ_P0071605 Lcorl protein_coding protein_coding MGP_BALBcJ_T0071606.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43393910 43514579 - MGP_BALBcJ_P0071606 Lcorl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071607.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43421729 43514599 - Lcorl protein_coding processed_transcript MGP_BALBcJ_T0071608.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43423666 43514713 - Lcorl protein_coding retained_intron MGP_BALBcJ_T0071609.1 MGP_BALBcJ_G0029514.1 mouse_genomes_project 5 43423836 43514586 - MGP_BALBcJ_P0071609 Lcorl protein_coding protein_coding MGP_BALBcJ_T0004725.1 MGP_BALBcJ_G0004085.1 mouse_genomes_project 5 98317885 98319112 + 4930405H06Rik antisense antisense MGP_BALBcJ_T0008035.1 MGP_BALBcJ_G0006557.1 mouse_genomes_project 5 20844698 20846227 + 4930580E04Rik lincRNA lincRNA MGP_BALBcJ_T0001578.1 MGP_BALBcJ_G0001495.1 mouse_genomes_project 5 47193991 47197097 - TEC TEC MGP_BALBcJ_T0075397.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138337128 138343479 - MGP_BALBcJ_P0075397 Gpc2 protein_coding protein_coding MGP_BALBcJ_T0075398.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138337130 138343459 - Gpc2 protein_coding retained_intron MGP_BALBcJ_T0075399.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138337130 138343436 - Gpc2 protein_coding retained_intron MGP_BALBcJ_T0075400.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138337130 138343456 - MGP_BALBcJ_P0075400 Gpc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075401.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138337133 138343439 - MGP_BALBcJ_P0075401 Gpc2 protein_coding protein_coding MGP_BALBcJ_T0075402.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138339001 138341711 - Gpc2 protein_coding retained_intron MGP_BALBcJ_T0075403.1 MGP_BALBcJ_G0030249.1 mouse_genomes_project 5 138340114 138343437 - Gpc2 protein_coding processed_transcript MGP_BALBcJ_T0072199.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73119516 73151945 + MGP_BALBcJ_P0072199 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0072200.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73119530 73167632 + MGP_BALBcJ_P0072200 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0072201.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73119576 73143594 + MGP_BALBcJ_P0072201 Pdgfra protein_coding non_stop_decay MGP_BALBcJ_T0072202.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73120154 73152558 + MGP_BALBcJ_P0072202 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0072203.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73120806 73130699 + Pdgfra protein_coding retained_intron MGP_BALBcJ_T0072204.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73122290 73131729 + MGP_BALBcJ_P0072204 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0072205.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73123594 73167618 + MGP_BALBcJ_P0072205 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0072206.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73124527 73134528 + MGP_BALBcJ_P0072206 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0072207.1 MGP_BALBcJ_G0029614.1 mouse_genomes_project 5 73129812 73135905 + MGP_BALBcJ_P0072207 Pdgfra protein_coding protein_coding MGP_BALBcJ_T0004632.1 MGP_BALBcJ_G0004012.1 mouse_genomes_project 5 22360468 22362859 + Prkag2os2 antisense antisense MGP_BALBcJ_T0074570.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127379968 127401678 - MGP_BALBcJ_P0074570 Slc15a4 protein_coding protein_coding MGP_BALBcJ_T0074571.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127379971 127401488 - MGP_BALBcJ_P0074571 Slc15a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074572.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127379971 127401680 - MGP_BALBcJ_P0074572 Slc15a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074573.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127380960 127388935 - MGP_BALBcJ_P0074573 Slc15a4 protein_coding protein_coding MGP_BALBcJ_T0074574.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127386184 127419009 - MGP_BALBcJ_P0074574 Slc15a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074575.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127388035 127388862 - Slc15a4 protein_coding processed_transcript MGP_BALBcJ_T0074576.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127388035 127388862 - Slc15a4 protein_coding processed_transcript MGP_BALBcJ_T0074577.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127388061 127393602 - MGP_BALBcJ_P0074577 Slc15a4 protein_coding protein_coding MGP_BALBcJ_T0074578.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127388860 127401145 - Slc15a4 protein_coding processed_transcript MGP_BALBcJ_T0074579.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127393043 127419026 - MGP_BALBcJ_P0074579 Slc15a4 protein_coding protein_coding MGP_BALBcJ_T0074580.1 MGP_BALBcJ_G0030093.1 mouse_genomes_project 5 127398696 127401643 - Slc15a4 protein_coding retained_intron MGP_BALBcJ_T0008461.1 MGP_BALBcJ_G0006856.1 mouse_genomes_project 5 151322481 151366472 + Gm43299 lincRNA lincRNA MGP_BALBcJ_T0008175.1 MGP_BALBcJ_G0006660.1 mouse_genomes_project 5 87169034 87188281 + Gm42912 lincRNA lincRNA MGP_BALBcJ_T0001535.1 MGP_BALBcJ_G0001453.1 mouse_genomes_project 5 42237951 42238090 + TEC TEC MGP_BALBcJ_T0074550.1 MGP_BALBcJ_G0030087.1 mouse_genomes_project 5 125155292 125156526 + MGP_BALBcJ_P0074550 Gm10382 protein_coding protein_coding MGP_BALBcJ_T0072941.1 MGP_BALBcJ_G0029784.1 mouse_genomes_project 5 102818767 102827118 - MGP_BALBcJ_P0072941 Gm17660 protein_coding protein_coding MGP_BALBcJ_T0072942.1 MGP_BALBcJ_G0029784.1 mouse_genomes_project 5 102818793 102827102 - MGP_BALBcJ_P0072942 Gm17660 protein_coding protein_coding MGP_BALBcJ_T0072943.1 MGP_BALBcJ_G0029784.1 mouse_genomes_project 5 102819952 102827118 - MGP_BALBcJ_P0072943 Gm17660 protein_coding protein_coding MGP_BALBcJ_T0074091.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121867822 121901462 - MGP_BALBcJ_P0074091 Ccdc63 protein_coding protein_coding MGP_BALBcJ_T0074092.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121867852 121870854 - Ccdc63 protein_coding retained_intron MGP_BALBcJ_T0074093.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121867867 121898222 - MGP_BALBcJ_P0074093 Ccdc63 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074094.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121888219 121895357 - MGP_BALBcJ_P0074094 Ccdc63 protein_coding protein_coding MGP_BALBcJ_T0074095.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121893251 121895357 - MGP_BALBcJ_P0074095 Ccdc63 protein_coding protein_coding MGP_BALBcJ_T0074096.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121897823 121902357 - Ccdc63 protein_coding retained_intron MGP_BALBcJ_T0074097.1 MGP_BALBcJ_G0030018.1 mouse_genomes_project 5 121899518 121904215 - Ccdc63 protein_coding retained_intron MGP_BALBcJ_T0099944.1 MGP_BALBcJ_G0037980.1 mouse_genomes_project 5 85094504 85094611 - Gm25211 snRNA snRNA MGP_BALBcJ_T0073200.1 MGP_BALBcJ_G0029841.1 mouse_genomes_project 5 107739453 107759181 - MGP_BALBcJ_P0073200 protein_coding protein_coding MGP_BALBcJ_T0073201.1 MGP_BALBcJ_G0029841.1 mouse_genomes_project 5 107739534 107759144 - MGP_BALBcJ_P0073201 protein_coding protein_coding MGP_BALBcJ_T0073202.1 MGP_BALBcJ_G0029841.1 mouse_genomes_project 5 107739973 107783429 - MGP_BALBcJ_P0073202 protein_coding protein_coding MGP_BALBcJ_T0073203.1 MGP_BALBcJ_G0029841.1 mouse_genomes_project 5 107741805 107757643 - MGP_BALBcJ_P0073203 protein_coding protein_coding MGP_BALBcJ_T0010657.1 MGP_BALBcJ_G0008782.1 mouse_genomes_project 5 32721696 32721763 + Mir3097 miRNA miRNA MGP_BALBcJ_T0070091.1 MGP_BALBcJ_G0029258.1 mouse_genomes_project 5 3780648 4375516 - MGP_BALBcJ_P0070091 Zfp804b protein_coding protein_coding MGP_BALBcJ_T0070092.1 MGP_BALBcJ_G0029258.1 mouse_genomes_project 5 3780668 3911394 - MGP_BALBcJ_P0070092 Zfp804b protein_coding protein_coding MGP_BALBcJ_T0073537.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113865439 113882722 - MGP_BALBcJ_P0073537 Kctd10 protein_coding protein_coding MGP_BALBcJ_T0073538.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113866334 113882703 - MGP_BALBcJ_P0073538 Kctd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073539.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113867493 113882697 - MGP_BALBcJ_P0073539 Kctd10 protein_coding protein_coding MGP_BALBcJ_T0073540.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113867577 113874001 - Kctd10 protein_coding processed_transcript MGP_BALBcJ_T0073541.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113868754 113870529 - Kctd10 protein_coding retained_intron MGP_BALBcJ_T0073542.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113868774 113872071 - Kctd10 protein_coding retained_intron MGP_BALBcJ_T0073543.1 MGP_BALBcJ_G0029912.1 mouse_genomes_project 5 113868855 113871114 - Kctd10 protein_coding retained_intron MGP_BALBcJ_T0074363.1 MGP_BALBcJ_G0030057.1 mouse_genomes_project 5 123674681 123677967 - MGP_BALBcJ_P0074363 Hcar1 protein_coding protein_coding MGP_BALBcJ_T0008303.1 MGP_BALBcJ_G0006746.1 mouse_genomes_project 5 115904472 115910620 + B230112J18Rik lincRNA lincRNA MGP_BALBcJ_T0074498.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124444447 124453288 + Atp6v0a2 protein_coding processed_transcript MGP_BALBcJ_T0074499.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124444923 124478560 + MGP_BALBcJ_P0074499 Atp6v0a2 protein_coding protein_coding MGP_BALBcJ_T0074500.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124444936 124476245 + MGP_BALBcJ_P0074500 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074501.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124445040 124458110 + Atp6v0a2 protein_coding retained_intron MGP_BALBcJ_T0074502.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124468412 124472004 + Atp6v0a2 protein_coding processed_transcript MGP_BALBcJ_T0074503.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124469972 124477706 + Atp6v0a2 protein_coding retained_intron MGP_BALBcJ_T0074504.1 MGP_BALBcJ_G0030079.1 mouse_genomes_project 5 124472307 124475922 + MGP_BALBcJ_P0074504 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101191.1 MGP_BALBcJ_G0039227.1 mouse_genomes_project 5 37165291 37165420 - Gm25377 snoRNA snoRNA MGP_BALBcJ_T0001679.1 MGP_BALBcJ_G0001595.1 mouse_genomes_project 5 70859068 70861424 - TEC TEC MGP_BALBcJ_T0001680.1 MGP_BALBcJ_G0001595.1 mouse_genomes_project 5 70860777 70861424 - TEC pseudogene MGP_BALBcJ_T0073749.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115427083 115508752 + Cit protein_coding retained_intron MGP_BALBcJ_T0073750.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115427085 115455641 + MGP_BALBcJ_P0073750 Cit protein_coding protein_coding MGP_BALBcJ_T0073751.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115427086 115455659 + MGP_BALBcJ_P0073751 Cit protein_coding protein_coding MGP_BALBcJ_T0073752.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115427449 115508759 + Cit protein_coding retained_intron MGP_BALBcJ_T0073753.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115427449 115590286 + MGP_BALBcJ_P0073753 Cit protein_coding protein_coding MGP_BALBcJ_T0073754.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115427449 115592895 + MGP_BALBcJ_P0073754 Cit protein_coding protein_coding MGP_BALBcJ_T0073755.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115428176 115590261 + MGP_BALBcJ_P0073755 Cit protein_coding protein_coding MGP_BALBcJ_T0073756.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115428176 115590261 + MGP_BALBcJ_P0073756 Cit protein_coding protein_coding MGP_BALBcJ_T0073757.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115428266 115436501 + Cit protein_coding processed_transcript MGP_BALBcJ_T0073758.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115432781 115444813 + Cit protein_coding retained_intron MGP_BALBcJ_T0073759.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115468349 115469533 + Cit protein_coding retained_intron MGP_BALBcJ_T0073760.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115490152 115508650 + Cit protein_coding retained_intron MGP_BALBcJ_T0073761.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115490181 115590261 + MGP_BALBcJ_P0073761 Cit protein_coding unknown_likely_coding MGP_BALBcJ_T0073762.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115508690 115590728 + Cit protein_coding processed_transcript MGP_BALBcJ_T0073763.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115509135 115590301 + Cit protein_coding processed_transcript MGP_BALBcJ_T0073764.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115516686 115530011 + Cit protein_coding processed_transcript MGP_BALBcJ_T0073765.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115528374 115582329 + Cit protein_coding retained_intron MGP_BALBcJ_T0073766.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115534125 115535685 + Cit protein_coding processed_transcript MGP_BALBcJ_T0073767.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115551080 115590298 + MGP_BALBcJ_P0073767 Cit protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073768.1 MGP_BALBcJ_G0029952.1 mouse_genomes_project 5 115570432 115574045 + Cit protein_coding retained_intron MGP_BALBcJ_T0073274.1 MGP_BALBcJ_G0029862.1 mouse_genomes_project 5 109786529 109789673 - MGP_BALBcJ_P0073274 P2rx2 protein_coding protein_coding MGP_BALBcJ_T0073275.1 MGP_BALBcJ_G0029862.1 mouse_genomes_project 5 109786529 109789930 - MGP_BALBcJ_P0073275 P2rx2 protein_coding protein_coding MGP_BALBcJ_T0073276.1 MGP_BALBcJ_G0029862.1 mouse_genomes_project 5 109786529 109789673 - MGP_BALBcJ_P0073276 P2rx2 protein_coding protein_coding MGP_BALBcJ_T0073277.1 MGP_BALBcJ_G0029862.1 mouse_genomes_project 5 109786530 109789694 - MGP_BALBcJ_P0073277 P2rx2 protein_coding protein_coding MGP_BALBcJ_T0073278.1 MGP_BALBcJ_G0029862.1 mouse_genomes_project 5 109786687 109789867 - P2rx2 protein_coding retained_intron MGP_BALBcJ_T0073279.1 MGP_BALBcJ_G0029862.1 mouse_genomes_project 5 109786687 109789867 - MGP_BALBcJ_P0073279 P2rx2 protein_coding protein_coding MGP_BALBcJ_T0008239.1 MGP_BALBcJ_G0006709.1 mouse_genomes_project 5 106627460 106655908 - Gm26692 lincRNA lincRNA MGP_BALBcJ_T0001794.1 MGP_BALBcJ_G0001709.1 mouse_genomes_project 5 120682457 120684762 - TEC TEC MGP_BALBcJ_T0001604.1 MGP_BALBcJ_G0001521.1 mouse_genomes_project 5 55583705 55586292 + TEC TEC MGP_BALBcJ_T0004644.1 MGP_BALBcJ_G0004021.1 mouse_genomes_project 5 29927382 29962512 - Gm36840 antisense antisense MGP_BALBcJ_T0072907.1 MGP_BALBcJ_G0029776.1 mouse_genomes_project 5 102173737 102292108 + Ptpn13 protein_coding retained_intron MGP_BALBcJ_T0072908.1 MGP_BALBcJ_G0029776.1 mouse_genomes_project 5 102173785 102279193 + MGP_BALBcJ_P0072908 Ptpn13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072909.1 MGP_BALBcJ_G0029776.1 mouse_genomes_project 5 102173801 102252870 + Ptpn13 protein_coding retained_intron MGP_BALBcJ_T0072910.1 MGP_BALBcJ_G0029776.1 mouse_genomes_project 5 102173957 102347880 + MGP_BALBcJ_P0072910 Ptpn13 protein_coding protein_coding MGP_BALBcJ_T0072911.1 MGP_BALBcJ_G0029776.1 mouse_genomes_project 5 102279018 102294013 + Ptpn13 protein_coding retained_intron MGP_BALBcJ_T0070813.1 MGP_BALBcJ_G0029390.1 mouse_genomes_project 5 28689132 28702675 - Gm29609 protein_coding processed_transcript MGP_BALBcJ_T0070816.1 MGP_BALBcJ_G0029390.1 mouse_genomes_project 5 28695662 28725257 - MGP_BALBcJ_P0070816 Gm29609 protein_coding protein_coding MGP_BALBcJ_T0010685.1 MGP_BALBcJ_G0008810.1 mouse_genomes_project 5 110469726 110469835 + Mir701 miRNA miRNA MGP_BALBcJ_T0008015.1 MGP_BALBcJ_G0006543.1 mouse_genomes_project 5 6018698 6019966 - Gm15611 lincRNA lincRNA MGP_BALBcJ_T0071002.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534512 30557814 + MGP_BALBcJ_P0071002 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071003.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534517 30566994 + MGP_BALBcJ_P0071003 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071004.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534524 30538815 + MGP_BALBcJ_P0071004 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071005.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534524 30662815 + MGP_BALBcJ_P0071005 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071006.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534532 30628170 + MGP_BALBcJ_P0071006 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071007.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534545 30665815 + MGP_BALBcJ_P0071007 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071008.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534571 30577804 + Depdc5 protein_coding retained_intron MGP_BALBcJ_T0071009.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534581 30558433 + Depdc5 protein_coding retained_intron MGP_BALBcJ_T0071010.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534581 30595582 + MGP_BALBcJ_P0071010 Depdc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071011.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534583 30549424 + MGP_BALBcJ_P0071011 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071012.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534588 30628168 + Depdc5 protein_coding processed_transcript MGP_BALBcJ_T0071013.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30534966 30538827 + MGP_BALBcJ_P0071013 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071014.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30535398 30663249 + MGP_BALBcJ_P0071014 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071015.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30575320 30590013 + MGP_BALBcJ_P0071015 Depdc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071016.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30595607 30663242 + MGP_BALBcJ_P0071016 Depdc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071017.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30595705 30663249 + MGP_BALBcJ_P0071017 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071018.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30615405 30616619 + Depdc5 protein_coding retained_intron MGP_BALBcJ_T0071019.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30615700 30636570 + MGP_BALBcJ_P0071019 Depdc5 protein_coding protein_coding MGP_BALBcJ_T0071020.1 MGP_BALBcJ_G0029416.1 mouse_genomes_project 5 30639559 30645786 + Depdc5 protein_coding retained_intron MGP_BALBcJ_T0073386.1 MGP_BALBcJ_G0029883.1 mouse_genomes_project 5 111818096 111820329 - MGP_BALBcJ_P0073386 Gm6583 protein_coding protein_coding MGP_BALBcJ_T0008238.1 MGP_BALBcJ_G0006708.1 mouse_genomes_project 5 106017753 106024964 + Gm43419 lincRNA lincRNA MGP_BALBcJ_T0015077.1 MGP_BALBcJ_G0013174.1 mouse_genomes_project 5 105569620 105570362 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071875.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63688354 63756985 + MGP_BALBcJ_P0071875 N4bp2 protein_coding protein_coding MGP_BALBcJ_T0071876.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63689876 63712007 + N4bp2 protein_coding processed_transcript MGP_BALBcJ_T0071877.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63689876 63701432 + N4bp2 protein_coding retained_intron MGP_BALBcJ_T0071878.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63690017 63744192 + MGP_BALBcJ_P0071878 N4bp2 protein_coding protein_coding MGP_BALBcJ_T0071879.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63708695 63710849 + N4bp2 protein_coding retained_intron MGP_BALBcJ_T0071880.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63711880 63756992 + MGP_BALBcJ_P0071880 N4bp2 protein_coding protein_coding MGP_BALBcJ_T0071881.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63727723 63730839 + N4bp2 protein_coding retained_intron MGP_BALBcJ_T0071882.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63736393 63741714 + N4bp2 protein_coding retained_intron MGP_BALBcJ_T0071883.1 MGP_BALBcJ_G0029560.1 mouse_genomes_project 5 63752118 63753751 + N4bp2 protein_coding retained_intron MGP_BALBcJ_T0072964.1 MGP_BALBcJ_G0029795.1 mouse_genomes_project 5 103775366 103825686 - MGP_BALBcJ_P0072964 Abcg3 protein_coding protein_coding MGP_BALBcJ_T0072965.1 MGP_BALBcJ_G0029795.1 mouse_genomes_project 5 103775999 103820795 - MGP_BALBcJ_P0072965 Abcg3 protein_coding protein_coding MGP_BALBcJ_T0072311.1 MGP_BALBcJ_G0029634.1 mouse_genomes_project 5 75304785 75322420 - MGP_BALBcJ_P0072311 Noa1 protein_coding protein_coding MGP_BALBcJ_T0072312.1 MGP_BALBcJ_G0029634.1 mouse_genomes_project 5 75315714 75316651 - Noa1 protein_coding processed_transcript MGP_BALBcJ_T0072313.1 MGP_BALBcJ_G0029634.1 mouse_genomes_project 5 75317315 75322395 - Noa1 protein_coding retained_intron MGP_BALBcJ_T0072314.1 MGP_BALBcJ_G0029634.1 mouse_genomes_project 5 75317942 75319979 - Noa1 protein_coding processed_transcript MGP_BALBcJ_T0001748.1 MGP_BALBcJ_G0001663.1 mouse_genomes_project 5 107555574 107558856 - TEC TEC MGP_BALBcJ_T0073993.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121177263 121254590 + MGP_BALBcJ_P0073993 Tmem116 protein_coding protein_coding MGP_BALBcJ_T0073994.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121177945 121219555 + MGP_BALBcJ_P0073994 Tmem116 protein_coding protein_coding MGP_BALBcJ_T0073995.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121177945 121218603 + MGP_BALBcJ_P0073995 Tmem116 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073996.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121177995 121206652 + MGP_BALBcJ_P0073996 Tmem116 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073997.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121178076 121206652 + Tmem116 protein_coding processed_transcript MGP_BALBcJ_T0073998.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121188264 121219562 + MGP_BALBcJ_P0073998 Tmem116 protein_coding protein_coding MGP_BALBcJ_T0073999.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121188264 121219535 + MGP_BALBcJ_P0073999 Tmem116 protein_coding protein_coding MGP_BALBcJ_T0074000.1 MGP_BALBcJ_G0030004.1 mouse_genomes_project 5 121188335 121218435 + MGP_BALBcJ_P0074000 Tmem116 protein_coding protein_coding MGP_BALBcJ_T0099937.1 MGP_BALBcJ_G0037973.1 mouse_genomes_project 5 78213469 78213576 + Gm24304 snRNA snRNA MGP_BALBcJ_T0001573.1 MGP_BALBcJ_G0001490.1 mouse_genomes_project 5 46784628 46786273 - TEC TEC MGP_BALBcJ_T0001711.1 MGP_BALBcJ_G0001626.1 mouse_genomes_project 5 90299785 90300749 - TEC TEC MGP_BALBcJ_T0074261.1 MGP_BALBcJ_G0030043.1 mouse_genomes_project 5 122939806 122950699 - MGP_BALBcJ_P0074261 Hpd protein_coding protein_coding MGP_BALBcJ_T0074262.1 MGP_BALBcJ_G0030043.1 mouse_genomes_project 5 122939871 122940919 - Hpd protein_coding processed_transcript MGP_BALBcJ_T0074263.1 MGP_BALBcJ_G0030043.1 mouse_genomes_project 5 122940100 122943914 - MGP_BALBcJ_P0074263 Hpd protein_coding protein_coding MGP_BALBcJ_T0074264.1 MGP_BALBcJ_G0030043.1 mouse_genomes_project 5 122945527 122950694 - Hpd protein_coding retained_intron MGP_BALBcJ_T0074265.1 MGP_BALBcJ_G0030043.1 mouse_genomes_project 5 122945527 122950695 - MGP_BALBcJ_P0074265 Hpd protein_coding protein_coding MGP_BALBcJ_T0074266.1 MGP_BALBcJ_G0030043.1 mouse_genomes_project 5 122948630 122950039 - Hpd protein_coding processed_transcript MGP_BALBcJ_T0071844.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63357525 63405812 - MGP_BALBcJ_P0071844 Smim14 protein_coding protein_coding MGP_BALBcJ_T0071845.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63360439 63405472 - MGP_BALBcJ_P0071845 Smim14 protein_coding protein_coding MGP_BALBcJ_T0071846.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63360440 63405283 - MGP_BALBcJ_P0071846 Smim14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071847.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63360563 63371939 - Smim14 protein_coding retained_intron MGP_BALBcJ_T0071848.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63363655 63369147 - Smim14 protein_coding retained_intron MGP_BALBcJ_T0071849.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63371193 63449684 - MGP_BALBcJ_P0071849 Smim14 protein_coding protein_coding MGP_BALBcJ_T0071850.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63377644 63449629 - Smim14 protein_coding retained_intron MGP_BALBcJ_T0071851.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63379592 63405293 - Smim14 protein_coding retained_intron MGP_BALBcJ_T0071852.1 MGP_BALBcJ_G0029557.1 mouse_genomes_project 5 63402360 63405812 - Smim14 protein_coding retained_intron MGP_BALBcJ_T0015092.1 MGP_BALBcJ_G0013189.1 mouse_genomes_project 5 108100545 108101263 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071366.1 MGP_BALBcJ_G0029470.1 mouse_genomes_project 5 34425611 34426884 - MGP_BALBcJ_P0071366 Bloc1s4 protein_coding protein_coding MGP_BALBcJ_T0015154.1 MGP_BALBcJ_G0013251.1 mouse_genomes_project 5 138708099 138708651 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015047.1 MGP_BALBcJ_G0013144.1 mouse_genomes_project 5 90129447 90130319 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101229.1 MGP_BALBcJ_G0039265.1 mouse_genomes_project 5 144974291 144974420 + Gm23995 snoRNA snoRNA MGP_BALBcJ_T0008103.1 MGP_BALBcJ_G0006602.1 mouse_genomes_project 5 42654009 43058956 - lincRNA lincRNA MGP_BALBcJ_T0008104.1 MGP_BALBcJ_G0006602.1 mouse_genomes_project 5 42759389 42827578 - lincRNA lincRNA MGP_BALBcJ_T0071807.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63104712 63168374 + MGP_BALBcJ_P0071807 Wdr19 protein_coding protein_coding MGP_BALBcJ_T0071808.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63104714 63168383 + MGP_BALBcJ_P0071808 Wdr19 protein_coding protein_coding MGP_BALBcJ_T0071809.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63104716 63110331 + Wdr19 protein_coding retained_intron MGP_BALBcJ_T0071810.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63104733 63152215 + Wdr19 protein_coding retained_intron MGP_BALBcJ_T0071811.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63104747 63136524 + Wdr19 protein_coding retained_intron MGP_BALBcJ_T0071812.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63104756 63129813 + Wdr19 protein_coding retained_intron MGP_BALBcJ_T0071813.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63107631 63168378 + Wdr19 protein_coding retained_intron MGP_BALBcJ_T0071814.1 MGP_BALBcJ_G0029550.1 mouse_genomes_project 5 63164392 63168377 + MGP_BALBcJ_P0071814 Wdr19 protein_coding protein_coding MGP_BALBcJ_T0073389.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111848902 111856779 - MGP_BALBcJ_P0073389 Asphd2 protein_coding protein_coding MGP_BALBcJ_T0073390.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111849992 111854284 - Asphd2 protein_coding processed_transcript MGP_BALBcJ_T0073391.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111856064 111858590 - MGP_BALBcJ_P0073391 Asphd2 protein_coding protein_coding MGP_BALBcJ_T0073392.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111856253 111859431 - MGP_BALBcJ_P0073392 Asphd2 protein_coding protein_coding MGP_BALBcJ_T0073393.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111856341 111858524 - MGP_BALBcJ_P0073393 Asphd2 protein_coding protein_coding MGP_BALBcJ_T0073394.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111856376 111858866 - MGP_BALBcJ_P0073394 Asphd2 protein_coding protein_coding MGP_BALBcJ_T0073395.1 MGP_BALBcJ_G0029884.1 mouse_genomes_project 5 111856446 111858496 - MGP_BALBcJ_P0073395 Asphd2 protein_coding protein_coding MGP_BALBcJ_T0072687.1 MGP_BALBcJ_G0029731.1 mouse_genomes_project 5 90949780 90954714 - Ccdc158 protein_coding retained_intron MGP_BALBcJ_T0072688.1 MGP_BALBcJ_G0029731.1 mouse_genomes_project 5 90950079 91009996 - MGP_BALBcJ_P0072688 Ccdc158 protein_coding protein_coding MGP_BALBcJ_T0072689.1 MGP_BALBcJ_G0029731.1 mouse_genomes_project 5 90987002 91010136 - MGP_BALBcJ_P0072689 Ccdc158 protein_coding protein_coding MGP_BALBcJ_T0072690.1 MGP_BALBcJ_G0029731.1 mouse_genomes_project 5 90987002 91010142 - MGP_BALBcJ_P0072690 Ccdc158 protein_coding protein_coding MGP_BALBcJ_T0070747.1 MGP_BALBcJ_G0029379.1 mouse_genomes_project 5 28476384 28488566 - MGP_BALBcJ_P0070747 Cgref1 protein_coding protein_coding MGP_BALBcJ_T0070748.1 MGP_BALBcJ_G0029379.1 mouse_genomes_project 5 28478459 28488381 - Cgref1 protein_coding retained_intron MGP_BALBcJ_T0074557.1 MGP_BALBcJ_G0030090.1 mouse_genomes_project 5 125242714 125285036 + MGP_BALBcJ_P0074557 Aacs protein_coding protein_coding MGP_BALBcJ_T0074558.1 MGP_BALBcJ_G0030090.1 mouse_genomes_project 5 125272871 125280365 + Aacs protein_coding retained_intron MGP_BALBcJ_T0074559.1 MGP_BALBcJ_G0030090.1 mouse_genomes_project 5 125277137 125279523 + Aacs protein_coding retained_intron MGP_BALBcJ_T0074560.1 MGP_BALBcJ_G0030090.1 mouse_genomes_project 5 125280326 125280829 + Aacs protein_coding processed_transcript MGP_BALBcJ_T0074561.1 MGP_BALBcJ_G0030090.1 mouse_genomes_project 5 125281824 125282622 + Aacs protein_coding processed_transcript MGP_BALBcJ_T0074562.1 MGP_BALBcJ_G0030090.1 mouse_genomes_project 5 125282870 125283981 + Aacs protein_coding processed_transcript MGP_BALBcJ_T0011805.1 MGP_BALBcJ_G0009912.1 mouse_genomes_project 5 70087223 70114318 + MGP_BALBcJ_P0011805 Atp10d polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011806.1 MGP_BALBcJ_G0009912.1 mouse_genomes_project 5 70087223 70181264 + MGP_BALBcJ_P0011806 Atp10d polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011807.1 MGP_BALBcJ_G0009912.1 mouse_genomes_project 5 70087247 70113454 + Atp10d polymorphic_pseudogene retained_intron MGP_BALBcJ_T0011808.1 MGP_BALBcJ_G0009912.1 mouse_genomes_project 5 70147794 70181264 + Atp10d polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0011809.1 MGP_BALBcJ_G0009912.1 mouse_genomes_project 5 70163188 70181250 + MGP_BALBcJ_P0011809 Atp10d polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011810.1 MGP_BALBcJ_G0009912.1 mouse_genomes_project 5 70163188 70181251 + Atp10d polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0018125.1 MGP_BALBcJ_G0015542.1 mouse_genomes_project 5 71997887 71998465 + Usp46os2 processed_transcript retained_intron MGP_BALBcJ_T0018126.1 MGP_BALBcJ_G0015542.1 mouse_genomes_project 5 71997888 71998465 + Usp46os2 processed_transcript processed_transcript MGP_BALBcJ_T0018127.1 MGP_BALBcJ_G0015542.1 mouse_genomes_project 5 71997893 72005741 + Usp46os2 processed_transcript antisense MGP_BALBcJ_T0010643.1 MGP_BALBcJ_G0008768.1 mouse_genomes_project 5 579706 579823 + Gm26238 miRNA miRNA MGP_BALBcJ_T0001897.1 MGP_BALBcJ_G0001810.1 mouse_genomes_project 5 145519269 145523026 + TEC TEC MGP_BALBcJ_T0001830.1 MGP_BALBcJ_G0001744.1 mouse_genomes_project 5 128090532 128093737 - TEC TEC MGP_BALBcJ_T0099918.1 MGP_BALBcJ_G0037954.1 mouse_genomes_project 5 36209257 36209393 + Gm22249 snRNA snRNA MGP_BALBcJ_T0001859.1 MGP_BALBcJ_G0001773.1 mouse_genomes_project 5 132015940 132017270 - TEC TEC MGP_BALBcJ_T0072452.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86027677 86046238 + MGP_BALBcJ_P0072452 Csn1s2a protein_coding protein_coding MGP_BALBcJ_T0072453.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86027677 86046238 + MGP_BALBcJ_P0072453 Csn1s2a protein_coding protein_coding MGP_BALBcJ_T0072454.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86027677 86046139 + MGP_BALBcJ_P0072454 Csn1s2a protein_coding protein_coding MGP_BALBcJ_T0072455.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86027691 86046139 + MGP_BALBcJ_P0072455 Csn1s2a protein_coding protein_coding MGP_BALBcJ_T0072456.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86027692 86033700 + Csn1s2a protein_coding retained_intron MGP_BALBcJ_T0072457.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86028894 86031920 + Csn1s2a protein_coding retained_intron MGP_BALBcJ_T0072458.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86030577 86033511 + Csn1s2a protein_coding retained_intron MGP_BALBcJ_T0072459.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86032720 86039322 + Csn1s2a protein_coding retained_intron MGP_BALBcJ_T0072460.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86039292 86046217 + Csn1s2a protein_coding retained_intron MGP_BALBcJ_T0072461.1 MGP_BALBcJ_G0029667.1 mouse_genomes_project 5 86042600 86044537 + Csn1s2a protein_coding retained_intron MGP_BALBcJ_T0008151.1 MGP_BALBcJ_G0006641.1 mouse_genomes_project 5 73354940 73366464 - Gm42800 lincRNA lincRNA MGP_BALBcJ_T0004697.1 MGP_BALBcJ_G0004064.1 mouse_genomes_project 5 69569952 69589053 - Gm43477 antisense antisense MGP_BALBcJ_T0008094.1 MGP_BALBcJ_G0006594.1 mouse_genomes_project 5 40693936 40698267 - Gm42711 lincRNA lincRNA MGP_BALBcJ_T0014974.1 MGP_BALBcJ_G0013071.1 mouse_genomes_project 5 59163162 59164000 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070301.1 MGP_BALBcJ_G0029293.1 mouse_genomes_project 5 18750725 18756433 + MGP_BALBcJ_P0070301 Fgl2 protein_coding protein_coding MGP_BALBcJ_T0018179.1 MGP_BALBcJ_G0015560.1 mouse_genomes_project 5 151870216 151883715 + processed_transcript retained_intron MGP_BALBcJ_T0018180.1 MGP_BALBcJ_G0015560.1 mouse_genomes_project 5 151870250 151897750 + processed_transcript lincRNA MGP_BALBcJ_T0018181.1 MGP_BALBcJ_G0015560.1 mouse_genomes_project 5 151870259 151915557 + processed_transcript lincRNA MGP_BALBcJ_T0018182.1 MGP_BALBcJ_G0015560.1 mouse_genomes_project 5 151901729 151915350 + processed_transcript lincRNA MGP_BALBcJ_T0018183.1 MGP_BALBcJ_G0015560.1 mouse_genomes_project 5 151908089 151935305 + processed_transcript lincRNA MGP_BALBcJ_T0018184.1 MGP_BALBcJ_G0015560.1 mouse_genomes_project 5 151908111 151933690 + processed_transcript lincRNA MGP_BALBcJ_T0072469.1 MGP_BALBcJ_G0029670.1 mouse_genomes_project 5 86147655 86158208 + MGP_BALBcJ_P0072469 Odam protein_coding protein_coding MGP_BALBcJ_T0072470.1 MGP_BALBcJ_G0029670.1 mouse_genomes_project 5 86148321 86156779 + MGP_BALBcJ_P0072470 Odam protein_coding protein_coding MGP_BALBcJ_T0073510.1 MGP_BALBcJ_G0029907.1 mouse_genomes_project 5 113622467 113626719 - MGP_BALBcJ_P0073510 Alkbh2 protein_coding protein_coding MGP_BALBcJ_T0073511.1 MGP_BALBcJ_G0029907.1 mouse_genomes_project 5 113622476 113626761 - MGP_BALBcJ_P0073511 Alkbh2 protein_coding protein_coding MGP_BALBcJ_T0073512.1 MGP_BALBcJ_G0029907.1 mouse_genomes_project 5 113626148 113626724 - MGP_BALBcJ_P0073512 Alkbh2 protein_coding protein_coding MGP_BALBcJ_T0073920.1 MGP_BALBcJ_G0029986.1 mouse_genomes_project 5 120312051 120318142 + MGP_BALBcJ_P0073920 Rasal1 protein_coding protein_coding MGP_BALBcJ_T0073921.1 MGP_BALBcJ_G0029986.1 mouse_genomes_project 5 120312061 120344354 + MGP_BALBcJ_P0073921 Rasal1 protein_coding protein_coding MGP_BALBcJ_T0073922.1 MGP_BALBcJ_G0029986.1 mouse_genomes_project 5 120312427 120344354 + MGP_BALBcJ_P0073922 Rasal1 protein_coding protein_coding MGP_BALBcJ_T0073923.1 MGP_BALBcJ_G0029986.1 mouse_genomes_project 5 120316608 120322888 + Rasal1 protein_coding processed_transcript MGP_BALBcJ_T0073924.1 MGP_BALBcJ_G0029986.1 mouse_genomes_project 5 120343349 120344063 + Rasal1 protein_coding retained_intron MGP_BALBcJ_T0102588.1 MGP_BALBcJ_G0040404.1 mouse_genomes_project 5 146206504 146208445 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001649.1 MGP_BALBcJ_G0001565.1 mouse_genomes_project 5 64287975 64289308 - TEC TEC MGP_BALBcJ_T0015070.1 MGP_BALBcJ_G0013167.1 mouse_genomes_project 5 102738665 102738887 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073007.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105576064 105637377 - MGP_BALBcJ_P0073007 Zfp644 protein_coding unknown_likely_coding MGP_BALBcJ_T0073008.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105576070 105657282 - MGP_BALBcJ_P0073008 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073009.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105576071 105658137 - MGP_BALBcJ_P0073009 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073010.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105576073 105657904 - MGP_BALBcJ_P0073010 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073011.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105576402 105583712 - Zfp644 protein_coding processed_transcript MGP_BALBcJ_T0073012.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105577296 105658112 - Zfp644 protein_coding processed_transcript MGP_BALBcJ_T0073013.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105596120 105658133 - MGP_BALBcJ_P0073013 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073014.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105597131 105657871 - MGP_BALBcJ_P0073014 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073015.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105597382 105628201 - MGP_BALBcJ_P0073015 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073016.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105597550 105657957 - MGP_BALBcJ_P0073016 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073017.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105597597 105657871 - MGP_BALBcJ_P0073017 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073018.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105597740 105657957 - MGP_BALBcJ_P0073018 Zfp644 protein_coding protein_coding MGP_BALBcJ_T0073019.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105650056 105656323 - Zfp644 protein_coding retained_intron MGP_BALBcJ_T0073020.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105651098 105657473 - Zfp644 protein_coding retained_intron MGP_BALBcJ_T0073021.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105651869 105657853 - Zfp644 protein_coding processed_transcript MGP_BALBcJ_T0073022.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105651882 105657851 - Zfp644 protein_coding processed_transcript MGP_BALBcJ_T0073023.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105656354 105658594 - Zfp644 protein_coding processed_transcript MGP_BALBcJ_T0073024.1 MGP_BALBcJ_G0029807.1 mouse_genomes_project 5 105656659 105657319 - Zfp644 protein_coding processed_transcript MGP_BALBcJ_T0001827.1 MGP_BALBcJ_G0001741.1 mouse_genomes_project 5 127089574 127090662 + TEC TEC MGP_BALBcJ_T0001471.1 MGP_BALBcJ_G0001392.1 mouse_genomes_project 5 21264057 21264947 + TEC TEC MGP_BALBcJ_T0001660.1 MGP_BALBcJ_G0001576.1 mouse_genomes_project 5 65363462 65365873 + TEC TEC MGP_BALBcJ_T0015099.1 MGP_BALBcJ_G0013196.1 mouse_genomes_project 5 109775032 109775351 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008451.1 MGP_BALBcJ_G0006849.1 mouse_genomes_project 5 150280894 150290638 - Gm21221 lincRNA lincRNA MGP_BALBcJ_T0008011.1 MGP_BALBcJ_G0006539.1 mouse_genomes_project 5 2583637 2586785 + lincRNA lincRNA MGP_BALBcJ_T0075284.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137706009 137728098 + MGP_BALBcJ_P0075284 Tsc22d4 protein_coding protein_coding MGP_BALBcJ_T0075285.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137706238 137712509 + Tsc22d4 protein_coding retained_intron MGP_BALBcJ_T0075286.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137706275 137721183 + MGP_BALBcJ_P0075286 Tsc22d4 protein_coding protein_coding MGP_BALBcJ_T0075287.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137710962 137718687 + Tsc22d4 protein_coding retained_intron MGP_BALBcJ_T0075288.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137717933 137719337 + MGP_BALBcJ_P0075288 Tsc22d4 protein_coding protein_coding MGP_BALBcJ_T0075289.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137717973 137719221 + MGP_BALBcJ_P0075289 Tsc22d4 protein_coding protein_coding MGP_BALBcJ_T0075290.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137721473 137728041 + MGP_BALBcJ_P0075290 Tsc22d4 protein_coding protein_coding MGP_BALBcJ_T0075291.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137721484 137728041 + MGP_BALBcJ_P0075291 Tsc22d4 protein_coding protein_coding MGP_BALBcJ_T0075292.1 MGP_BALBcJ_G0030220.1 mouse_genomes_project 5 137727338 137727931 + Tsc22d4 protein_coding processed_transcript MGP_BALBcJ_T0075430.1 MGP_BALBcJ_G0030258.1 mouse_genomes_project 5 138837717 138894484 + MGP_BALBcJ_P0075430 Fam20c protein_coding protein_coding MGP_BALBcJ_T0075431.1 MGP_BALBcJ_G0030258.1 mouse_genomes_project 5 138838286 138893788 + MGP_BALBcJ_P0075431 Fam20c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075432.1 MGP_BALBcJ_G0030258.1 mouse_genomes_project 5 138838290 138842053 + Fam20c protein_coding retained_intron MGP_BALBcJ_T0075433.1 MGP_BALBcJ_G0030258.1 mouse_genomes_project 5 138870267 138893566 + Fam20c protein_coding processed_transcript MGP_BALBcJ_T0075434.1 MGP_BALBcJ_G0030258.1 mouse_genomes_project 5 138872541 138891659 + Fam20c protein_coding processed_transcript MGP_BALBcJ_T0075435.1 MGP_BALBcJ_G0030258.1 mouse_genomes_project 5 138891509 138893812 + Fam20c protein_coding retained_intron MGP_BALBcJ_T0099968.1 MGP_BALBcJ_G0038004.1 mouse_genomes_project 5 122264033 122264134 + Gm22965 snRNA snRNA MGP_BALBcJ_T0015078.1 MGP_BALBcJ_G0013175.1 mouse_genomes_project 5 105704672 105705320 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073082.1 MGP_BALBcJ_G0029820.1 mouse_genomes_project 5 106684491 106694065 - MGP_BALBcJ_P0073082 Gfi1 protein_coding protein_coding MGP_BALBcJ_T0073083.1 MGP_BALBcJ_G0029820.1 mouse_genomes_project 5 106684491 106692602 - MGP_BALBcJ_P0073083 Gfi1 protein_coding protein_coding MGP_BALBcJ_T0073084.1 MGP_BALBcJ_G0029820.1 mouse_genomes_project 5 106684500 106694065 - MGP_BALBcJ_P0073084 Gfi1 protein_coding protein_coding MGP_BALBcJ_T0073085.1 MGP_BALBcJ_G0029820.1 mouse_genomes_project 5 106685058 106692220 - MGP_BALBcJ_P0073085 Gfi1 protein_coding protein_coding MGP_BALBcJ_T0073086.1 MGP_BALBcJ_G0029820.1 mouse_genomes_project 5 106689440 106694296 - MGP_BALBcJ_P0073086 Gfi1 protein_coding protein_coding MGP_BALBcJ_T0071127.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31686848 31695366 - Poln protein_coding processed_transcript MGP_BALBcJ_T0071128.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31686858 31729918 - Poln protein_coding processed_transcript MGP_BALBcJ_T0071129.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31686867 31863474 - MGP_BALBcJ_P0071129 Poln protein_coding protein_coding MGP_BALBcJ_T0071130.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31686867 31863474 - MGP_BALBcJ_P0071130 Poln protein_coding protein_coding MGP_BALBcJ_T0071131.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31686952 31863452 - MGP_BALBcJ_P0071131 Poln protein_coding protein_coding MGP_BALBcJ_T0071132.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31687098 31841964 - MGP_BALBcJ_P0071132 Poln protein_coding unknown_likely_coding MGP_BALBcJ_T0071133.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31687098 31841964 - MGP_BALBcJ_P0071133 Poln protein_coding unknown_likely_coding MGP_BALBcJ_T0071134.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31696156 31790030 - Poln protein_coding processed_transcript MGP_BALBcJ_T0071135.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31714545 31789974 - Poln protein_coding processed_transcript MGP_BALBcJ_T0071136.1 MGP_BALBcJ_G0029435.1 mouse_genomes_project 5 31785966 31790046 - Poln protein_coding retained_intron MGP_BALBcJ_T0001708.1 MGP_BALBcJ_G0001623.1 mouse_genomes_project 5 88752462 88755105 + TEC TEC MGP_BALBcJ_T0074454.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124248544 124270919 + MGP_BALBcJ_P0074454 Kmt5a protein_coding protein_coding MGP_BALBcJ_T0074455.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124248581 124270121 + MGP_BALBcJ_P0074455 Kmt5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074456.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124248599 124249870 + Kmt5a protein_coding retained_intron MGP_BALBcJ_T0074457.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124254135 124269570 + MGP_BALBcJ_P0074457 Kmt5a protein_coding protein_coding MGP_BALBcJ_T0074458.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124254147 124270153 + Kmt5a protein_coding processed_transcript MGP_BALBcJ_T0074459.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124254350 124270904 + MGP_BALBcJ_P0074459 Kmt5a protein_coding protein_coding MGP_BALBcJ_T0074460.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124254426 124259967 + Kmt5a protein_coding retained_intron MGP_BALBcJ_T0074461.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124255346 124265728 + Kmt5a protein_coding processed_transcript MGP_BALBcJ_T0074462.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124255604 124269241 + Kmt5a protein_coding processed_transcript MGP_BALBcJ_T0074463.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124255647 124259432 + Kmt5a protein_coding processed_transcript MGP_BALBcJ_T0074464.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124258818 124268402 + Kmt5a protein_coding processed_transcript MGP_BALBcJ_T0074465.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124259031 124268553 + Kmt5a protein_coding retained_intron MGP_BALBcJ_T0074466.1 MGP_BALBcJ_G0030071.1 mouse_genomes_project 5 124259834 124269447 + Kmt5a protein_coding retained_intron MGP_BALBcJ_T0004720.1 MGP_BALBcJ_G0004084.1 mouse_genomes_project 5 96861096 96863952 - A730035I17Rik antisense antisense MGP_BALBcJ_T0004721.1 MGP_BALBcJ_G0004084.1 mouse_genomes_project 5 96861112 96863178 - A730035I17Rik antisense antisense MGP_BALBcJ_T0004722.1 MGP_BALBcJ_G0004084.1 mouse_genomes_project 5 96861999 96863750 - A730035I17Rik antisense antisense MGP_BALBcJ_T0004723.1 MGP_BALBcJ_G0004084.1 mouse_genomes_project 5 96862422 96863181 - A730035I17Rik antisense antisense MGP_BALBcJ_T0004724.1 MGP_BALBcJ_G0004084.1 mouse_genomes_project 5 96863263 96863952 - A730035I17Rik antisense pseudogene MGP_BALBcJ_T0070129.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5404350 5430002 - MGP_BALBcJ_P0070129 Dbf4 protein_coding protein_coding MGP_BALBcJ_T0070130.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5404594 5429834 - MGP_BALBcJ_P0070130 Dbf4 protein_coding protein_coding MGP_BALBcJ_T0070131.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5405229 5407683 - Dbf4 protein_coding retained_intron MGP_BALBcJ_T0070133.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5409038 5430003 - Dbf4 protein_coding retained_intron MGP_BALBcJ_T0070134.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5410520 5412618 - Dbf4 protein_coding retained_intron MGP_BALBcJ_T0070135.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5425804 5430016 - Dbf4 protein_coding processed_transcript MGP_BALBcJ_T0070136.1 MGP_BALBcJ_G0029263.1 mouse_genomes_project 5 5429505 5429991 - Dbf4 protein_coding retained_intron MGP_BALBcJ_T0073292.1 MGP_BALBcJ_G0029865.1 mouse_genomes_project 5 110002560 110079607 + MGP_BALBcJ_P0073292 Galnt9 protein_coding protein_coding MGP_BALBcJ_T0073293.1 MGP_BALBcJ_G0029865.1 mouse_genomes_project 5 110061704 110079609 + MGP_BALBcJ_P0073293 Galnt9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073294.1 MGP_BALBcJ_G0029865.1 mouse_genomes_project 5 110061705 110079612 + MGP_BALBcJ_P0073294 Galnt9 protein_coding protein_coding MGP_BALBcJ_T0008227.1 MGP_BALBcJ_G0006699.1 mouse_genomes_project 5 104361132 104365750 + Gm42749 lincRNA lincRNA MGP_BALBcJ_T0008228.1 MGP_BALBcJ_G0006699.1 mouse_genomes_project 5 104365123 104367508 + Gm42749 lincRNA lincRNA MGP_BALBcJ_T0072050.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70182513 70417888 - MGP_BALBcJ_P0072050 Corin protein_coding protein_coding MGP_BALBcJ_T0072051.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70182514 70417623 - MGP_BALBcJ_P0072051 Corin protein_coding protein_coding MGP_BALBcJ_T0072052.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70183974 70417848 - MGP_BALBcJ_P0072052 Corin protein_coding protein_coding MGP_BALBcJ_T0072053.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70183974 70417854 - MGP_BALBcJ_P0072053 Corin protein_coding protein_coding MGP_BALBcJ_T0072054.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70183986 70417854 - MGP_BALBcJ_P0072054 Corin protein_coding protein_coding MGP_BALBcJ_T0072055.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70236979 70244099 - Corin protein_coding retained_intron MGP_BALBcJ_T0072056.1 MGP_BALBcJ_G0029588.1 mouse_genomes_project 5 70241783 70263239 - Corin protein_coding processed_transcript MGP_BALBcJ_T0075625.1 MGP_BALBcJ_G0030299.1 mouse_genomes_project 5 142689069 142693308 - MGP_BALBcJ_P0075625 Papolb protein_coding protein_coding MGP_BALBcJ_T0004707.1 MGP_BALBcJ_G0004072.1 mouse_genomes_project 5 75096524 75104273 + Hopxos antisense antisense MGP_BALBcJ_T0001435.1 MGP_BALBcJ_G0001356.1 mouse_genomes_project 5 5336197 5341699 - TEC TEC MGP_BALBcJ_T0015066.1 MGP_BALBcJ_G0013163.1 mouse_genomes_project 5 101137419 101138151 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075033.1 MGP_BALBcJ_G0030176.1 mouse_genomes_project 5 135973290 135983719 + Upk3bl protein_coding processed_transcript MGP_BALBcJ_T0075034.1 MGP_BALBcJ_G0030176.1 mouse_genomes_project 5 135975944 135983719 + MGP_BALBcJ_P0075034 Upk3bl protein_coding protein_coding MGP_BALBcJ_T0075035.1 MGP_BALBcJ_G0030176.1 mouse_genomes_project 5 135976020 135983714 + MGP_BALBcJ_P0075035 Upk3bl protein_coding protein_coding MGP_BALBcJ_T0075036.1 MGP_BALBcJ_G0030176.1 mouse_genomes_project 5 135976020 135983721 + MGP_BALBcJ_P0075036 Upk3bl protein_coding protein_coding MGP_BALBcJ_T0075037.1 MGP_BALBcJ_G0030176.1 mouse_genomes_project 5 135978803 135983705 + Upk3bl protein_coding processed_transcript MGP_BALBcJ_T0075038.1 MGP_BALBcJ_G0030176.1 mouse_genomes_project 5 135978876 135983707 + MGP_BALBcJ_P0075038 Upk3bl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008047.1 MGP_BALBcJ_G0006566.1 mouse_genomes_project 5 23975984 24012091 - 4930584F24Rik lincRNA lincRNA MGP_BALBcJ_T0008048.1 MGP_BALBcJ_G0006566.1 mouse_genomes_project 5 23975986 24012116 - 4930584F24Rik lincRNA lincRNA MGP_BALBcJ_T0008049.1 MGP_BALBcJ_G0006566.1 mouse_genomes_project 5 23975988 24012080 - 4930584F24Rik lincRNA lincRNA MGP_BALBcJ_T0008050.1 MGP_BALBcJ_G0006566.1 mouse_genomes_project 5 23993722 24012091 - 4930584F24Rik lincRNA lincRNA MGP_BALBcJ_T0074296.1 MGP_BALBcJ_G0030049.1 mouse_genomes_project 5 123307543 123308966 + MGP_BALBcJ_P0074296 B3gnt4 protein_coding protein_coding MGP_BALBcJ_T0102584.1 MGP_BALBcJ_G0040400.1 mouse_genomes_project 5 142720289 142720800 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015171.1 MGP_BALBcJ_G0013268.1 mouse_genomes_project 5 145245468 145245916 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098953.1 MGP_BALBcJ_G0037000.1 mouse_genomes_project 5 1807595 1810704 - Gm43112 sense_intronic sense_intronic MGP_BALBcJ_T0099936.1 MGP_BALBcJ_G0037972.1 mouse_genomes_project 5 77869159 77869308 - Gm23429 snRNA snRNA MGP_BALBcJ_T0010656.1 MGP_BALBcJ_G0008781.1 mouse_genomes_project 5 32428832 32428952 - Mir467g miRNA miRNA MGP_BALBcJ_T0014853.1 MGP_BALBcJ_G0012950.1 mouse_genomes_project 5 16574400 16574641 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074734.1 MGP_BALBcJ_G0030126.1 mouse_genomes_project 5 130670797 130672759 - MGP_BALBcJ_P0074734 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0015051.1 MGP_BALBcJ_G0013148.1 mouse_genomes_project 5 91540112 91540494 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014976.1 MGP_BALBcJ_G0013073.1 mouse_genomes_project 5 59575394 59576030 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014918.1 MGP_BALBcJ_G0013015.1 mouse_genomes_project 5 31459303 31459615 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075329.1 MGP_BALBcJ_G0030233.1 mouse_genomes_project 5 137995360 138006694 + MGP_BALBcJ_P0075329 protein_coding protein_coding MGP_BALBcJ_T0011577.1 MGP_BALBcJ_G0009702.1 mouse_genomes_project 5 90324648 90324924 + Gm24113 misc_RNA misc_RNA MGP_BALBcJ_T0004704.1 MGP_BALBcJ_G0004070.1 mouse_genomes_project 5 74302776 74303428 + Gm7467 antisense antisense MGP_BALBcJ_T0099957.1 MGP_BALBcJ_G0037993.1 mouse_genomes_project 5 105630344 105630466 + Gm24191 snRNA snRNA MGP_BALBcJ_T0014958.1 MGP_BALBcJ_G0013055.1 mouse_genomes_project 5 53882456 53882769 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001489.1 MGP_BALBcJ_G0001408.1 mouse_genomes_project 5 29064094 29065482 + TEC TEC MGP_BALBcJ_T0070317.1 MGP_BALBcJ_G0029298.1 mouse_genomes_project 5 19038958 19077853 - MGP_BALBcJ_P0070317 Napepld protein_coding protein_coding MGP_BALBcJ_T0070318.1 MGP_BALBcJ_G0029298.1 mouse_genomes_project 5 19038960 19077855 - MGP_BALBcJ_P0070318 Napepld protein_coding protein_coding MGP_BALBcJ_T0001770.1 MGP_BALBcJ_G0001685.1 mouse_genomes_project 5 114588892 114590207 + TEC TEC MGP_BALBcJ_T0015065.1 MGP_BALBcJ_G0013162.1 mouse_genomes_project 5 100896773 100897548 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008433.1 MGP_BALBcJ_G0006839.1 mouse_genomes_project 5 149433527 149438708 - 5930430L01Rik lincRNA lincRNA MGP_BALBcJ_T0008434.1 MGP_BALBcJ_G0006839.1 mouse_genomes_project 5 149434554 149438700 - 5930430L01Rik lincRNA lincRNA MGP_BALBcJ_T0101222.1 MGP_BALBcJ_G0039258.1 mouse_genomes_project 5 106895579 106895711 + Gm26387 snoRNA snoRNA MGP_BALBcJ_T0008358.1 MGP_BALBcJ_G0006782.1 mouse_genomes_project 5 126492983 126522485 + Gm43757 lincRNA lincRNA MGP_BALBcJ_T0008359.1 MGP_BALBcJ_G0006782.1 mouse_genomes_project 5 126493005 126497895 + Gm43757 lincRNA lincRNA MGP_BALBcJ_T0008087.1 MGP_BALBcJ_G0006589.1 mouse_genomes_project 5 36954876 36961044 + Gm43454 lincRNA lincRNA MGP_BALBcJ_T0071513.1 MGP_BALBcJ_G0029499.1 mouse_genomes_project 5 41159201 41265276 + MGP_BALBcJ_P0071513 C1qtnf7 protein_coding protein_coding MGP_BALBcJ_T0071514.1 MGP_BALBcJ_G0029499.1 mouse_genomes_project 5 41159425 41255208 + MGP_BALBcJ_P0071514 C1qtnf7 protein_coding protein_coding MGP_BALBcJ_T0071515.1 MGP_BALBcJ_G0029499.1 mouse_genomes_project 5 41247853 41263069 + MGP_BALBcJ_P0071515 C1qtnf7 protein_coding protein_coding MGP_BALBcJ_T0074949.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135259987 135266825 + MGP_BALBcJ_P0074949 Nsun5 protein_coding protein_coding MGP_BALBcJ_T0074950.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135260004 135261438 + Nsun5 protein_coding processed_transcript MGP_BALBcJ_T0074951.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135260009 135264231 + MGP_BALBcJ_P0074951 Nsun5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074952.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135260025 135264092 + MGP_BALBcJ_P0074952 Nsun5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074953.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135260611 135262576 + Nsun5 protein_coding retained_intron MGP_BALBcJ_T0074954.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135260961 135264111 + Nsun5 protein_coding retained_intron MGP_BALBcJ_T0074955.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135261093 135261843 + Nsun5 protein_coding retained_intron MGP_BALBcJ_T0074956.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135263668 135266832 + Nsun5 protein_coding retained_intron MGP_BALBcJ_T0074957.1 MGP_BALBcJ_G0030159.1 mouse_genomes_project 5 135264205 135266170 + Nsun5 protein_coding retained_intron MGP_BALBcJ_T0008101.1 MGP_BALBcJ_G0006601.1 mouse_genomes_project 5 42612105 42624487 + 4930431F12Rik lincRNA lincRNA MGP_BALBcJ_T0008102.1 MGP_BALBcJ_G0006601.1 mouse_genomes_project 5 42612153 42613524 + 4930431F12Rik lincRNA lincRNA MGP_BALBcJ_T0074587.1 MGP_BALBcJ_G0030096.1 mouse_genomes_project 5 128402654 128405902 + MGP_BALBcJ_P0074587 Fzd10 protein_coding protein_coding MGP_BALBcJ_T0001743.1 MGP_BALBcJ_G0001658.1 mouse_genomes_project 5 106130334 106132415 - TEC TEC MGP_BALBcJ_T0075714.1 MGP_BALBcJ_G0030318.1 mouse_genomes_project 5 143656947 143698553 + MGP_BALBcJ_P0075714 Daglb protein_coding protein_coding MGP_BALBcJ_T0075715.1 MGP_BALBcJ_G0030318.1 mouse_genomes_project 5 143656976 143667705 + Daglb protein_coding retained_intron MGP_BALBcJ_T0075716.1 MGP_BALBcJ_G0030318.1 mouse_genomes_project 5 143665277 143670148 + Daglb protein_coding retained_intron MGP_BALBcJ_T0075717.1 MGP_BALBcJ_G0030318.1 mouse_genomes_project 5 143679318 143682635 + Daglb protein_coding retained_intron MGP_BALBcJ_T0073606.1 MGP_BALBcJ_G0029926.1 mouse_genomes_project 5 114405917 114408842 - MGP_BALBcJ_P0073606 Gm9936 protein_coding protein_coding MGP_BALBcJ_T0008363.1 MGP_BALBcJ_G0006786.1 mouse_genomes_project 5 126804579 126822275 + 4933438B17Rik lincRNA lincRNA MGP_BALBcJ_T0008364.1 MGP_BALBcJ_G0006786.1 mouse_genomes_project 5 126807985 126869657 + 4933438B17Rik lincRNA lincRNA MGP_BALBcJ_T0008365.1 MGP_BALBcJ_G0006786.1 mouse_genomes_project 5 126807992 126822130 + 4933438B17Rik lincRNA lincRNA MGP_BALBcJ_T0004691.1 MGP_BALBcJ_G0004059.1 mouse_genomes_project 5 65209431 65210726 - Gm42670 antisense antisense MGP_BALBcJ_T0073204.1 MGP_BALBcJ_G0029842.1 mouse_genomes_project 5 107785711 108151372 - MGP_BALBcJ_P0073204 protein_coding protein_coding MGP_BALBcJ_T0015163.1 MGP_BALBcJ_G0013260.1 mouse_genomes_project 5 143248802 143249022 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008237.1 MGP_BALBcJ_G0006707.1 mouse_genomes_project 5 105534295 105534808 + Gm29464 lincRNA lincRNA MGP_BALBcJ_T0075863.1 MGP_BALBcJ_G0030348.1 mouse_genomes_project 5 145410246 145416982 - MGP_BALBcJ_P0075863 Zkscan14 protein_coding protein_coding MGP_BALBcJ_T0075864.1 MGP_BALBcJ_G0030348.1 mouse_genomes_project 5 145410923 145416971 - MGP_BALBcJ_P0075864 Zkscan14 protein_coding protein_coding MGP_BALBcJ_T0075865.1 MGP_BALBcJ_G0030348.1 mouse_genomes_project 5 145414739 145416982 - MGP_BALBcJ_P0075865 Zkscan14 protein_coding protein_coding MGP_BALBcJ_T0070191.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288310 6513538 + MGP_BALBcJ_P0070191 9330182L06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070192.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288319 6493290 + MGP_BALBcJ_P0070192 9330182L06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070193.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288322 6439092 + 9330182L06Rik protein_coding retained_intron MGP_BALBcJ_T0070194.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288324 6514519 + MGP_BALBcJ_P0070194 9330182L06Rik protein_coding protein_coding MGP_BALBcJ_T0070195.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288324 6493674 + MGP_BALBcJ_P0070195 9330182L06Rik protein_coding protein_coding MGP_BALBcJ_T0070196.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288341 6515627 + MGP_BALBcJ_P0070196 9330182L06Rik protein_coding protein_coding MGP_BALBcJ_T0070197.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6288367 6491177 + MGP_BALBcJ_P0070197 9330182L06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070198.1 MGP_BALBcJ_G0029272.1 mouse_genomes_project 5 6444568 6449569 + 9330182L06Rik protein_coding retained_intron MGP_BALBcJ_T0075770.1 MGP_BALBcJ_G0030330.1 mouse_genomes_project 5 144157968 144164852 - MGP_BALBcJ_P0075770 Ocm protein_coding protein_coding MGP_BALBcJ_T0075771.1 MGP_BALBcJ_G0030330.1 mouse_genomes_project 5 144158240 144163959 - MGP_BALBcJ_P0075771 Ocm protein_coding protein_coding MGP_BALBcJ_T0075772.1 MGP_BALBcJ_G0030330.1 mouse_genomes_project 5 144162692 144164923 - MGP_BALBcJ_P0075772 Ocm protein_coding protein_coding MGP_BALBcJ_T0075673.1 MGP_BALBcJ_G0030308.1 mouse_genomes_project 5 143354329 143362871 - MGP_BALBcJ_P0075673 Rbak protein_coding protein_coding MGP_BALBcJ_T0075674.1 MGP_BALBcJ_G0030308.1 mouse_genomes_project 5 143354329 143362916 - MGP_BALBcJ_P0075674 Rbak protein_coding protein_coding MGP_BALBcJ_T0075675.1 MGP_BALBcJ_G0030308.1 mouse_genomes_project 5 143354330 143358878 - Rbak protein_coding retained_intron MGP_BALBcJ_T0075676.1 MGP_BALBcJ_G0030308.1 mouse_genomes_project 5 143361109 143362873 - Rbak protein_coding retained_intron MGP_BALBcJ_T0008243.1 MGP_BALBcJ_G0006713.1 mouse_genomes_project 5 107369521 107369996 - Gm42517 lincRNA lincRNA MGP_BALBcJ_T0070596.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26777229 26926381 - MGP_BALBcJ_P0070596 Lmbr1 protein_coding protein_coding MGP_BALBcJ_T0070597.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26777241 26926387 - MGP_BALBcJ_P0070597 Lmbr1 protein_coding protein_coding MGP_BALBcJ_T0070598.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26779546 26926299 - MGP_BALBcJ_P0070598 Lmbr1 protein_coding protein_coding MGP_BALBcJ_T0070599.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26779800 26926381 - MGP_BALBcJ_P0070599 Lmbr1 protein_coding protein_coding MGP_BALBcJ_T0070600.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26780268 26926327 - MGP_BALBcJ_P0070600 Lmbr1 protein_coding protein_coding MGP_BALBcJ_T0070601.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26782445 26845177 - MGP_BALBcJ_P0070601 Lmbr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070602.1 MGP_BALBcJ_G0029351.1 mouse_genomes_project 5 26810035 26908051 - Lmbr1 protein_coding processed_transcript MGP_BALBcJ_T0008113.1 MGP_BALBcJ_G0006611.1 mouse_genomes_project 5 50650263 50664471 + Gm42746 lincRNA lincRNA MGP_BALBcJ_T0071748.1 MGP_BALBcJ_G0029536.1 mouse_genomes_project 5 59658762 59661111 + MGP_BALBcJ_P0071748 G6pd2 protein_coding protein_coding MGP_BALBcJ_T0008321.1 MGP_BALBcJ_G0006762.1 mouse_genomes_project 5 119454386 119456907 - 1700021F13Rik lincRNA lincRNA MGP_BALBcJ_T0008322.1 MGP_BALBcJ_G0006762.1 mouse_genomes_project 5 119454390 119456705 - 1700021F13Rik lincRNA lincRNA MGP_BALBcJ_T0001879.1 MGP_BALBcJ_G0001792.1 mouse_genomes_project 5 135521416 135527850 - TEC TEC MGP_BALBcJ_T0072524.1 MGP_BALBcJ_G0029693.1 mouse_genomes_project 5 88038927 88245771 - MGP_BALBcJ_P0072524 Adamts3 protein_coding protein_coding MGP_BALBcJ_T0072525.1 MGP_BALBcJ_G0029693.1 mouse_genomes_project 5 88038927 88245771 - MGP_BALBcJ_P0072525 Adamts3 protein_coding protein_coding MGP_BALBcJ_T0072526.1 MGP_BALBcJ_G0029693.1 mouse_genomes_project 5 88193236 88246170 - MGP_BALBcJ_P0072526 Adamts3 protein_coding protein_coding MGP_BALBcJ_T0072527.1 MGP_BALBcJ_G0029693.1 mouse_genomes_project 5 88223995 88244983 - Adamts3 protein_coding processed_transcript MGP_BALBcJ_T0014828.1 MGP_BALBcJ_G0012925.1 mouse_genomes_project 5 4430079 4431080 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004660.1 MGP_BALBcJ_G0004036.1 mouse_genomes_project 5 40806623 40882977 - Gm7854 antisense antisense MGP_BALBcJ_T0004661.1 MGP_BALBcJ_G0004036.1 mouse_genomes_project 5 40806623 40883347 - Gm7854 antisense antisense MGP_BALBcJ_T0004662.1 MGP_BALBcJ_G0004036.1 mouse_genomes_project 5 40882993 40883344 - Gm7854 antisense antisense MGP_BALBcJ_T0073280.1 MGP_BALBcJ_G0029863.1 mouse_genomes_project 5 109791447 109802875 + Lrcol1 protein_coding retained_intron MGP_BALBcJ_T0073281.1 MGP_BALBcJ_G0029863.1 mouse_genomes_project 5 109791447 109802875 + MGP_BALBcJ_P0073281 Lrcol1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073282.1 MGP_BALBcJ_G0029863.1 mouse_genomes_project 5 109791447 109802875 + MGP_BALBcJ_P0073282 Lrcol1 protein_coding protein_coding MGP_BALBcJ_T0073283.1 MGP_BALBcJ_G0029863.1 mouse_genomes_project 5 109800965 109802948 + MGP_BALBcJ_P0073283 Lrcol1 protein_coding protein_coding MGP_BALBcJ_T0073284.1 MGP_BALBcJ_G0029863.1 mouse_genomes_project 5 109801027 109802885 + MGP_BALBcJ_P0073284 Lrcol1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010678.1 MGP_BALBcJ_G0008803.1 mouse_genomes_project 5 91126851 91126963 - Mir1961 miRNA miRNA MGP_BALBcJ_T0008186.1 MGP_BALBcJ_G0006671.1 mouse_genomes_project 5 95564155 95576998 - Gm33370 lincRNA lincRNA MGP_BALBcJ_T0071186.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32267715 32327183 + MGP_BALBcJ_P0071186 Add1 protein_coding protein_coding MGP_BALBcJ_T0071187.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32267816 32300757 + MGP_BALBcJ_P0071187 Add1 protein_coding protein_coding MGP_BALBcJ_T0071188.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32267820 32300757 + MGP_BALBcJ_P0071188 Add1 protein_coding protein_coding MGP_BALBcJ_T0071189.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32267855 32296489 + Add1 protein_coding processed_transcript MGP_BALBcJ_T0071190.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32267914 32327180 + MGP_BALBcJ_P0071190 Add1 protein_coding protein_coding MGP_BALBcJ_T0071191.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32267924 32327183 + MGP_BALBcJ_P0071191 Add1 protein_coding protein_coding MGP_BALBcJ_T0071192.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32268093 32327169 + MGP_BALBcJ_P0071192 Add1 protein_coding protein_coding MGP_BALBcJ_T0071193.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32291204 32293977 + Add1 protein_coding retained_intron MGP_BALBcJ_T0071194.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32296205 32325691 + MGP_BALBcJ_P0071194 Add1 protein_coding protein_coding MGP_BALBcJ_T0071195.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32309108 32320194 + MGP_BALBcJ_P0071195 Add1 protein_coding protein_coding MGP_BALBcJ_T0071196.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32311500 32315326 + Add1 protein_coding retained_intron MGP_BALBcJ_T0071197.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32311641 32325506 + MGP_BALBcJ_P0071197 Add1 protein_coding protein_coding MGP_BALBcJ_T0071198.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32314228 32327183 + MGP_BALBcJ_P0071198 Add1 protein_coding protein_coding MGP_BALBcJ_T0071199.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32314723 32325616 + Add1 protein_coding retained_intron MGP_BALBcJ_T0071200.1 MGP_BALBcJ_G0029444.1 mouse_genomes_project 5 32314845 32323618 + Add1 protein_coding retained_intron MGP_BALBcJ_T0014992.1 MGP_BALBcJ_G0013089.1 mouse_genomes_project 5 65911210 65912084 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015157.1 MGP_BALBcJ_G0013254.1 mouse_genomes_project 5 140079117 140079609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001554.1 MGP_BALBcJ_G0001472.1 mouse_genomes_project 5 46006666 46008078 + TEC TEC MGP_BALBcJ_T0070990.1 MGP_BALBcJ_G0029413.1 mouse_genomes_project 5 30220709 30300042 + MGP_BALBcJ_P0070990 Yes1 protein_coding protein_coding MGP_BALBcJ_T0070991.1 MGP_BALBcJ_G0029413.1 mouse_genomes_project 5 30220722 30301521 + MGP_BALBcJ_P0070991 Yes1 protein_coding protein_coding MGP_BALBcJ_T0070992.1 MGP_BALBcJ_G0029413.1 mouse_genomes_project 5 30220736 30223478 + Yes1 protein_coding retained_intron MGP_BALBcJ_T0070993.1 MGP_BALBcJ_G0029413.1 mouse_genomes_project 5 30220873 30301521 + MGP_BALBcJ_P0070993 Yes1 protein_coding protein_coding MGP_BALBcJ_T0070994.1 MGP_BALBcJ_G0029413.1 mouse_genomes_project 5 30250923 30264889 + MGP_BALBcJ_P0070994 Yes1 protein_coding protein_coding MGP_BALBcJ_T0008281.1 MGP_BALBcJ_G0006731.1 mouse_genomes_project 5 112052391 112053125 + Gm27004 lincRNA lincRNA MGP_BALBcJ_T0071516.1 MGP_BALBcJ_G0029500.1 mouse_genomes_project 5 41306449 41386309 + MGP_BALBcJ_P0071516 Cc2d2a protein_coding protein_coding MGP_BALBcJ_T0071517.1 MGP_BALBcJ_G0029500.1 mouse_genomes_project 5 41317384 41334199 + Cc2d2a protein_coding retained_intron MGP_BALBcJ_T0071518.1 MGP_BALBcJ_G0029500.1 mouse_genomes_project 5 41317384 41384657 + MGP_BALBcJ_P0071518 Cc2d2a protein_coding protein_coding MGP_BALBcJ_T0071519.1 MGP_BALBcJ_G0029500.1 mouse_genomes_project 5 41341586 41362600 + Cc2d2a protein_coding retained_intron MGP_BALBcJ_T0073568.1 MGP_BALBcJ_G0029918.1 mouse_genomes_project 5 114176646 114196920 - MGP_BALBcJ_P0073568 Gltp protein_coding protein_coding MGP_BALBcJ_T0073569.1 MGP_BALBcJ_G0029918.1 mouse_genomes_project 5 114177330 114196877 - MGP_BALBcJ_P0073569 Gltp protein_coding protein_coding MGP_BALBcJ_T0073570.1 MGP_BALBcJ_G0029918.1 mouse_genomes_project 5 114177475 114196844 - MGP_BALBcJ_P0073570 Gltp protein_coding protein_coding MGP_BALBcJ_T0008109.1 MGP_BALBcJ_G0006607.1 mouse_genomes_project 5 49756278 49757490 + Gm43177 lincRNA lincRNA MGP_BALBcJ_T0075690.1 MGP_BALBcJ_G0030313.1 mouse_genomes_project 5 143484383 143488981 - MGP_BALBcJ_P0075690 Zfp853 protein_coding protein_coding MGP_BALBcJ_T0070286.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563843 18638817 + Gsap protein_coding retained_intron MGP_BALBcJ_T0070287.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563855 18670698 + MGP_BALBcJ_P0070287 Gsap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070288.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563877 18670720 + MGP_BALBcJ_P0070288 Gsap protein_coding protein_coding MGP_BALBcJ_T0070289.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563887 18565976 + Gsap protein_coding processed_transcript MGP_BALBcJ_T0070290.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563900 18630841 + MGP_BALBcJ_P0070290 Gsap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070291.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563901 18667639 + MGP_BALBcJ_P0070291 Gsap protein_coding protein_coding MGP_BALBcJ_T0070292.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18563901 18667639 + MGP_BALBcJ_P0070292 Gsap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070293.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18630209 18637334 + Gsap protein_coding retained_intron MGP_BALBcJ_T0070294.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18668785 18696356 + MGP_BALBcJ_P0070294 Gsap protein_coding protein_coding MGP_BALBcJ_T0070295.1 MGP_BALBcJ_G0029291.1 mouse_genomes_project 5 18668865 18696357 + Gsap protein_coding processed_transcript MGP_BALBcJ_T0015005.1 MGP_BALBcJ_G0013102.1 mouse_genomes_project 5 73013551 73015110 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074885.1 MGP_BALBcJ_G0030145.1 mouse_genomes_project 5 134823272 134824924 - MGP_BALBcJ_P0074885 Cldn4 protein_coding protein_coding MGP_BALBcJ_T0015116.1 MGP_BALBcJ_G0013213.1 mouse_genomes_project 5 115059504 115060005 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072478.1 MGP_BALBcJ_G0029673.1 mouse_genomes_project 5 86238408 86277714 + MGP_BALBcJ_P0072478 Gm28434 protein_coding protein_coding MGP_BALBcJ_T0098980.1 MGP_BALBcJ_G0037026.1 mouse_genomes_project 5 136789346 136796655 - Gm20485 sense_intronic sense_intronic MGP_BALBcJ_T0072576.1 MGP_BALBcJ_G0029706.1 mouse_genomes_project 5 89168323 89177972 + MGP_BALBcJ_P0072576 Cxcl15 protein_coding protein_coding MGP_BALBcJ_T0015131.1 MGP_BALBcJ_G0013228.1 mouse_genomes_project 5 125619077 125619866 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075378.1 MGP_BALBcJ_G0030243.1 mouse_genomes_project 5 138168468 138169776 + MGP_BALBcJ_P0075378 Mblac1 protein_coding protein_coding MGP_BALBcJ_T0073124.1 MGP_BALBcJ_G0029826.1 mouse_genomes_project 5 107091067 107116886 - MGP_BALBcJ_P0073124 Tmed5 protein_coding protein_coding MGP_BALBcJ_T0073125.1 MGP_BALBcJ_G0029826.1 mouse_genomes_project 5 107102246 107116904 - MGP_BALBcJ_P0073125 Tmed5 protein_coding protein_coding MGP_BALBcJ_T0073126.1 MGP_BALBcJ_G0029826.1 mouse_genomes_project 5 107106009 107116941 - MGP_BALBcJ_P0073126 Tmed5 protein_coding protein_coding MGP_BALBcJ_T0073127.1 MGP_BALBcJ_G0029826.1 mouse_genomes_project 5 107107435 107116870 - MGP_BALBcJ_P0073127 Tmed5 protein_coding protein_coding MGP_BALBcJ_T0073128.1 MGP_BALBcJ_G0029826.1 mouse_genomes_project 5 107113789 107116854 - MGP_BALBcJ_P0073128 Tmed5 protein_coding protein_coding MGP_BALBcJ_T0073129.1 MGP_BALBcJ_G0029826.1 mouse_genomes_project 5 107114044 107116851 - MGP_BALBcJ_P0073129 Tmed5 protein_coding protein_coding MGP_BALBcJ_T0098769.1 MGP_BALBcJ_G0036823.1 mouse_genomes_project 5 123315317 123315454 + Gm24682 scaRNA scaRNA MGP_BALBcJ_T0098621.1 MGP_BALBcJ_G0036675.1 mouse_genomes_project 5 134259877 134259991 + n-R5s178 rRNA rRNA MGP_BALBcJ_T0101715.1 MGP_BALBcJ_G0039692.1 mouse_genomes_project 5 55689775 55690349 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0072610.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90397930 90429744 - MGP_BALBcJ_P0072610 G3bp2 protein_coding protein_coding MGP_BALBcJ_T0072611.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90397940 90430044 - MGP_BALBcJ_P0072611 G3bp2 protein_coding unknown_likely_coding MGP_BALBcJ_T0072612.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90397948 90429906 - MGP_BALBcJ_P0072612 G3bp2 protein_coding protein_coding MGP_BALBcJ_T0072613.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90402145 90413321 - G3bp2 protein_coding processed_transcript MGP_BALBcJ_T0072614.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90403603 90413312 - G3bp2 protein_coding retained_intron MGP_BALBcJ_T0072615.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90412318 90419046 - MGP_BALBcJ_P0072615 G3bp2 protein_coding protein_coding MGP_BALBcJ_T0072616.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90414055 90429450 - MGP_BALBcJ_P0072616 G3bp2 protein_coding protein_coding MGP_BALBcJ_T0072617.1 MGP_BALBcJ_G0029718.1 mouse_genomes_project 5 90415440 90429904 - G3bp2 protein_coding retained_intron MGP_BALBcJ_T0070354.1 MGP_BALBcJ_G0029304.1 mouse_genomes_project 5 19858135 19921644 - Orc5 protein_coding retained_intron MGP_BALBcJ_T0070355.1 MGP_BALBcJ_G0029304.1 mouse_genomes_project 5 19858139 19921715 - MGP_BALBcJ_P0070355 Orc5 protein_coding protein_coding MGP_BALBcJ_T0070356.1 MGP_BALBcJ_G0029304.1 mouse_genomes_project 5 19890290 19894024 - Orc5 protein_coding retained_intron MGP_BALBcJ_T0070357.1 MGP_BALBcJ_G0029304.1 mouse_genomes_project 5 19894873 19920858 - MGP_BALBcJ_P0070357 Orc5 protein_coding protein_coding MGP_BALBcJ_T0070358.1 MGP_BALBcJ_G0029304.1 mouse_genomes_project 5 19894908 19921715 - Orc5 protein_coding processed_transcript MGP_BALBcJ_T0070359.1 MGP_BALBcJ_G0029304.1 mouse_genomes_project 5 19917737 19921769 - Orc5 protein_coding processed_transcript MGP_BALBcJ_T0071888.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63865077 63899865 + MGP_BALBcJ_P0071888 Chrna9 protein_coding protein_coding MGP_BALBcJ_T0071889.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63865084 63901943 + MGP_BALBcJ_P0071889 Chrna9 protein_coding protein_coding MGP_BALBcJ_T0071890.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63865104 63866071 + Chrna9 protein_coding retained_intron MGP_BALBcJ_T0071891.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63865129 63874571 + Chrna9 protein_coding processed_transcript MGP_BALBcJ_T0071892.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63865131 63874587 + Chrna9 protein_coding processed_transcript MGP_BALBcJ_T0071893.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63897828 63908231 + MGP_BALBcJ_P0071893 Chrna9 protein_coding protein_coding MGP_BALBcJ_T0071894.1 MGP_BALBcJ_G0029562.1 mouse_genomes_project 5 63906800 63908045 + Chrna9 protein_coding processed_transcript MGP_BALBcJ_T0001520.1 MGP_BALBcJ_G0001438.1 mouse_genomes_project 5 40912775 40913987 + TEC TEC MGP_BALBcJ_T0010703.1 MGP_BALBcJ_G0008828.1 mouse_genomes_project 5 135273892 135273973 - Mir7033 miRNA miRNA MGP_BALBcJ_T0001434.1 MGP_BALBcJ_G0001355.1 mouse_genomes_project 5 4288847 4290391 - TEC TEC MGP_BALBcJ_T0014939.1 MGP_BALBcJ_G0013036.1 mouse_genomes_project 5 43302491 43303116 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072618.1 MGP_BALBcJ_G0029719.1 mouse_genomes_project 5 90484806 90550447 + MGP_BALBcJ_P0072618 Uso1 protein_coding protein_coding MGP_BALBcJ_T0072619.1 MGP_BALBcJ_G0029719.1 mouse_genomes_project 5 90484814 90550450 + MGP_BALBcJ_P0072619 Uso1 protein_coding protein_coding MGP_BALBcJ_T0072620.1 MGP_BALBcJ_G0029719.1 mouse_genomes_project 5 90484815 90531259 + Uso1 protein_coding retained_intron MGP_BALBcJ_T0072621.1 MGP_BALBcJ_G0029719.1 mouse_genomes_project 5 90484834 90550448 + MGP_BALBcJ_P0072621 Uso1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072622.1 MGP_BALBcJ_G0029719.1 mouse_genomes_project 5 90528592 90550427 + Uso1 protein_coding processed_transcript MGP_BALBcJ_T0001868.1 MGP_BALBcJ_G0001782.1 mouse_genomes_project 5 133273686 133274608 + TEC TEC MGP_BALBcJ_T0099961.1 MGP_BALBcJ_G0037997.1 mouse_genomes_project 5 112527702 112527811 + Gm22740 snRNA snRNA MGP_BALBcJ_T0001480.1 MGP_BALBcJ_G0001400.1 mouse_genomes_project 5 25743231 25743596 - TEC TEC MGP_BALBcJ_T0073209.1 MGP_BALBcJ_G0029847.1 mouse_genomes_project 5 108284468 108308994 - MGP_BALBcJ_P0073209 protein_coding protein_coding MGP_BALBcJ_T0072319.1 MGP_BALBcJ_G0029636.1 mouse_genomes_project 5 75362097 75421002 - MGP_BALBcJ_P0072319 Igfbp7 protein_coding protein_coding MGP_BALBcJ_T0072320.1 MGP_BALBcJ_G0029636.1 mouse_genomes_project 5 75362105 75421001 - MGP_BALBcJ_P0072320 Igfbp7 protein_coding protein_coding MGP_BALBcJ_T0099966.1 MGP_BALBcJ_G0038002.1 mouse_genomes_project 5 117766820 117766927 - Gm26411 snRNA snRNA MGP_BALBcJ_T0014910.1 MGP_BALBcJ_G0013007.1 mouse_genomes_project 5 30154672 30155067 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001549.1 MGP_BALBcJ_G0001467.1 mouse_genomes_project 5 44429668 44431522 + TEC TEC MGP_BALBcJ_T0004641.1 MGP_BALBcJ_G0004019.1 mouse_genomes_project 5 29089473 29090793 - 4930566F21Rik antisense antisense MGP_BALBcJ_T0004642.1 MGP_BALBcJ_G0004019.1 mouse_genomes_project 5 29089477 29098017 - 4930566F21Rik antisense antisense MGP_BALBcJ_T0015071.1 MGP_BALBcJ_G0013168.1 mouse_genomes_project 5 103830255 103830762 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074549.1 MGP_BALBcJ_G0030086.1 mouse_genomes_project 5 125153786 125155157 - MGP_BALBcJ_P0074549 protein_coding protein_coding MGP_BALBcJ_T0004744.1 MGP_BALBcJ_G0004097.1 mouse_genomes_project 5 106375232 106402251 - Gm17202 antisense antisense MGP_BALBcJ_T0073453.1 MGP_BALBcJ_G0029897.1 mouse_genomes_project 5 113224424 113229220 + MGP_BALBcJ_P0073453 Ficd protein_coding protein_coding MGP_BALBcJ_T0008149.1 MGP_BALBcJ_G0006639.1 mouse_genomes_project 5 72913876 72931305 + Gm6116 lincRNA lincRNA MGP_BALBcJ_T0008150.1 MGP_BALBcJ_G0006640.1 mouse_genomes_project 5 73081170 73114349 + Gm19583 lincRNA lincRNA MGP_BALBcJ_T0001599.1 MGP_BALBcJ_G0001516.1 mouse_genomes_project 5 53517734 53521451 - TEC TEC MGP_BALBcJ_T0015100.1 MGP_BALBcJ_G0013197.1 mouse_genomes_project 5 109938659 109940106 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073736.1 MGP_BALBcJ_G0029950.1 mouse_genomes_project 5 115209752 115225503 + MGP_BALBcJ_P0073736 Rab35 protein_coding protein_coding MGP_BALBcJ_T0073737.1 MGP_BALBcJ_G0029950.1 mouse_genomes_project 5 115209975 115223886 + MGP_BALBcJ_P0073737 Rab35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001673.1 MGP_BALBcJ_G0001589.1 mouse_genomes_project 5 67185635 67187768 - TEC TEC MGP_BALBcJ_T0072852.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99484870 99521341 - MGP_BALBcJ_P0072852 Helq protein_coding protein_coding MGP_BALBcJ_T0072853.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99484876 99488164 - Helq protein_coding retained_intron MGP_BALBcJ_T0072854.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99485172 99521211 - MGP_BALBcJ_P0072854 Helq protein_coding protein_coding MGP_BALBcJ_T0072855.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99485181 99489539 - Helq protein_coding retained_intron MGP_BALBcJ_T0072856.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99489462 99496761 - MGP_BALBcJ_P0072856 Helq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072857.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99494272 99496845 - Helq protein_coding retained_intron MGP_BALBcJ_T0072858.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99501109 99505726 - Helq protein_coding retained_intron MGP_BALBcJ_T0072859.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99505824 99515470 - Helq protein_coding processed_transcript MGP_BALBcJ_T0072860.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99505905 99521320 - MGP_BALBcJ_P0072860 Helq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072861.1 MGP_BALBcJ_G0029767.1 mouse_genomes_project 5 99514515 99515796 - Helq protein_coding retained_intron MGP_BALBcJ_T0099941.1 MGP_BALBcJ_G0037977.1 mouse_genomes_project 5 83994180 83994341 + Gm24626 snRNA snRNA MGP_BALBcJ_T0071377.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34709682 34773381 + MGP_BALBcJ_P0071377 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071378.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34710487 34767241 + Jakmip1 protein_coding processed_transcript MGP_BALBcJ_T0071379.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34711242 34773477 + MGP_BALBcJ_P0071379 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071380.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34711262 34773176 + MGP_BALBcJ_P0071380 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071381.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34728374 34767261 + Jakmip1 protein_coding processed_transcript MGP_BALBcJ_T0071382.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34728772 34768886 + Jakmip1 protein_coding retained_intron MGP_BALBcJ_T0071383.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34728813 34787066 + MGP_BALBcJ_P0071383 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071384.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34732195 34807495 + MGP_BALBcJ_P0071384 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071385.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34732254 34769172 + Jakmip1 protein_coding retained_intron MGP_BALBcJ_T0071386.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34767300 34829741 + MGP_BALBcJ_P0071386 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071387.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34767300 34829741 + MGP_BALBcJ_P0071387 Jakmip1 protein_coding protein_coding MGP_BALBcJ_T0071388.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34773013 34773963 + Jakmip1 protein_coding retained_intron MGP_BALBcJ_T0071389.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34805165 34807214 + Jakmip1 protein_coding retained_intron MGP_BALBcJ_T0071390.1 MGP_BALBcJ_G0029475.1 mouse_genomes_project 5 34808421 34833033 + MGP_BALBcJ_P0071390 Jakmip1 protein_coding unknown_likely_coding MGP_BALBcJ_T0070490.1 MGP_BALBcJ_G0029328.1 mouse_genomes_project 5 22077168 22084823 + MGP_BALBcJ_P0070490 Chpf2 protein_coding protein_coding MGP_BALBcJ_T0070491.1 MGP_BALBcJ_G0029328.1 mouse_genomes_project 5 22077169 22079601 + Chpf2 protein_coding processed_transcript MGP_BALBcJ_T0070492.1 MGP_BALBcJ_G0029328.1 mouse_genomes_project 5 22077177 22082912 + MGP_BALBcJ_P0070492 Chpf2 protein_coding protein_coding MGP_BALBcJ_T0070493.1 MGP_BALBcJ_G0029328.1 mouse_genomes_project 5 22077199 22078676 + Chpf2 protein_coding processed_transcript MGP_BALBcJ_T0070494.1 MGP_BALBcJ_G0029328.1 mouse_genomes_project 5 22077252 22081648 + MGP_BALBcJ_P0070494 Chpf2 protein_coding protein_coding MGP_BALBcJ_T0070498.1 MGP_BALBcJ_G0029328.1 mouse_genomes_project 5 22083914 22084984 + Chpf2 protein_coding processed_transcript MGP_BALBcJ_T0070279.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18355996 18428351 - MGP_BALBcJ_P0070279 Ptpn12 protein_coding protein_coding MGP_BALBcJ_T0070280.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18355997 18359786 - Ptpn12 protein_coding retained_intron MGP_BALBcJ_T0070281.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18368721 18372205 - Ptpn12 protein_coding retained_intron MGP_BALBcJ_T0070282.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18368895 18380400 - Ptpn12 protein_coding retained_intron MGP_BALBcJ_T0070283.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18372081 18428193 - MGP_BALBcJ_P0070283 Ptpn12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070284.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18376155 18428337 - MGP_BALBcJ_P0070284 Ptpn12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070285.1 MGP_BALBcJ_G0029290.1 mouse_genomes_project 5 18380237 18428165 - MGP_BALBcJ_P0070285 Ptpn12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0014858.1 MGP_BALBcJ_G0012955.1 mouse_genomes_project 5 18495344 18495718 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075842.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145353046 145360762 + MGP_BALBcJ_P0075842 Bud31 protein_coding protein_coding MGP_BALBcJ_T0075843.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145353080 145354346 + Bud31 protein_coding retained_intron MGP_BALBcJ_T0075844.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145353081 145360758 + MGP_BALBcJ_P0075844 Bud31 protein_coding protein_coding MGP_BALBcJ_T0075845.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145353092 145360758 + MGP_BALBcJ_P0075845 Bud31 protein_coding protein_coding MGP_BALBcJ_T0075846.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145353099 145360755 + MGP_BALBcJ_P0075846 Bud31 protein_coding protein_coding MGP_BALBcJ_T0075847.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145354831 145357631 + Bud31 protein_coding retained_intron MGP_BALBcJ_T0075848.1 MGP_BALBcJ_G0030344.1 mouse_genomes_project 5 145357487 145360667 + Bud31 protein_coding retained_intron MGP_BALBcJ_T0001526.1 MGP_BALBcJ_G0001444.1 mouse_genomes_project 5 41591827 41592374 + TEC TEC MGP_BALBcJ_T0073630.1 MGP_BALBcJ_G0029930.1 mouse_genomes_project 5 114496022 114519794 - MGP_BALBcJ_P0073630 Hnf1a protein_coding protein_coding MGP_BALBcJ_T0073631.1 MGP_BALBcJ_G0029930.1 mouse_genomes_project 5 114497103 114519571 - MGP_BALBcJ_P0073631 Hnf1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073632.1 MGP_BALBcJ_G0029930.1 mouse_genomes_project 5 114499621 114519571 - MGP_BALBcJ_P0073632 Hnf1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073633.1 MGP_BALBcJ_G0029930.1 mouse_genomes_project 5 114517430 114519821 - Hnf1a protein_coding retained_intron MGP_BALBcJ_T0072912.1 MGP_BALBcJ_G0029777.1 mouse_genomes_project 5 102356454 102380071 - MGP_BALBcJ_P0072912 Slc10a6 protein_coding protein_coding MGP_BALBcJ_T0099955.1 MGP_BALBcJ_G0037991.1 mouse_genomes_project 5 103776971 103777078 + Gm24097 snRNA snRNA MGP_BALBcJ_T0073571.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114214243 114228822 + MGP_BALBcJ_P0073571 Tchp protein_coding protein_coding MGP_BALBcJ_T0073572.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114214302 114215923 + Tchp protein_coding processed_transcript MGP_BALBcJ_T0073573.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114214347 114228822 + Tchp protein_coding retained_intron MGP_BALBcJ_T0073574.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114217547 114220387 + Tchp protein_coding retained_intron MGP_BALBcJ_T0073575.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114221123 114226184 + MGP_BALBcJ_P0073575 Tchp protein_coding protein_coding MGP_BALBcJ_T0073576.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114221447 114228822 + Tchp protein_coding processed_transcript MGP_BALBcJ_T0073577.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114224047 114225214 + Tchp protein_coding retained_intron MGP_BALBcJ_T0073578.1 MGP_BALBcJ_G0029919.1 mouse_genomes_project 5 114226178 114227653 + Tchp protein_coding retained_intron MGP_BALBcJ_T0073253.1 MGP_BALBcJ_G0029858.1 mouse_genomes_project 5 109678977 109704819 + MGP_BALBcJ_P0073253 Ankle2 protein_coding protein_coding MGP_BALBcJ_T0073254.1 MGP_BALBcJ_G0029858.1 mouse_genomes_project 5 109678977 109703632 + MGP_BALBcJ_P0073254 Ankle2 protein_coding protein_coding MGP_BALBcJ_T0073255.1 MGP_BALBcJ_G0029858.1 mouse_genomes_project 5 109679014 109704815 + MGP_BALBcJ_P0073255 Ankle2 protein_coding protein_coding MGP_BALBcJ_T0073256.1 MGP_BALBcJ_G0029858.1 mouse_genomes_project 5 109679136 109686154 + Ankle2 protein_coding retained_intron MGP_BALBcJ_T0073257.1 MGP_BALBcJ_G0029858.1 mouse_genomes_project 5 109685494 109686236 + Ankle2 protein_coding retained_intron MGP_BALBcJ_T0073258.1 MGP_BALBcJ_G0029858.1 mouse_genomes_project 5 109698897 109701226 + Ankle2 protein_coding processed_transcript MGP_BALBcJ_T0008026.1 MGP_BALBcJ_G0006552.1 mouse_genomes_project 5 15846924 15855418 - Gm43030 lincRNA lincRNA MGP_BALBcJ_T0070169.1 MGP_BALBcJ_G0029270.1 mouse_genomes_project 5 6118084 6176922 + MGP_BALBcJ_P0070169 Tmem243 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070170.1 MGP_BALBcJ_G0029270.1 mouse_genomes_project 5 6118221 6136062 + MGP_BALBcJ_P0070170 Tmem243 protein_coding protein_coding MGP_BALBcJ_T0070190.1 MGP_BALBcJ_G0029270.1 mouse_genomes_project 5 6174424 6179815 + Tmem243 protein_coding processed_transcript MGP_BALBcJ_T0072732.1 MGP_BALBcJ_G0029740.1 mouse_genomes_project 5 94867433 94926714 + MGP_BALBcJ_P0072732 Mrpl1 protein_coding protein_coding MGP_BALBcJ_T0072733.1 MGP_BALBcJ_G0029740.1 mouse_genomes_project 5 94868055 94926696 + MGP_BALBcJ_P0072733 Mrpl1 protein_coding protein_coding MGP_BALBcJ_T0072734.1 MGP_BALBcJ_G0029740.1 mouse_genomes_project 5 94868084 94897436 + MGP_BALBcJ_P0072734 Mrpl1 protein_coding protein_coding MGP_BALBcJ_T0014876.1 MGP_BALBcJ_G0012973.1 mouse_genomes_project 5 20340330 20340938 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072503.1 MGP_BALBcJ_G0029687.1 mouse_genomes_project 5 87030272 87048014 - MGP_BALBcJ_P0072503 Grsf1 protein_coding protein_coding MGP_BALBcJ_T0072504.1 MGP_BALBcJ_G0029687.1 mouse_genomes_project 5 87031993 87048514 - MGP_BALBcJ_P0072504 Grsf1 protein_coding protein_coding MGP_BALBcJ_T0072505.1 MGP_BALBcJ_G0029687.1 mouse_genomes_project 5 87035078 87043748 - Grsf1 protein_coding retained_intron MGP_BALBcJ_T0072506.1 MGP_BALBcJ_G0029687.1 mouse_genomes_project 5 87046050 87047542 - Grsf1 protein_coding processed_transcript MGP_BALBcJ_T0015194.1 MGP_BALBcJ_G0013291.1 mouse_genomes_project 5 150483930 150485476 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004828.1 MGP_BALBcJ_G0004158.1 mouse_genomes_project 5 134300973 134303014 + Gm42882 antisense antisense MGP_BALBcJ_T0008406.1 MGP_BALBcJ_G0006816.1 mouse_genomes_project 5 143346885 143347858 - Rbakdn lincRNA lincRNA MGP_BALBcJ_T0008407.1 MGP_BALBcJ_G0006816.1 mouse_genomes_project 5 143346885 143347810 - Rbakdn lincRNA lincRNA MGP_BALBcJ_T0098611.1 MGP_BALBcJ_G0036665.1 mouse_genomes_project 5 51100206 51100316 + Gm26486 rRNA rRNA MGP_BALBcJ_T0008154.1 MGP_BALBcJ_G0006643.1 mouse_genomes_project 5 73726198 73731537 - Gm43100 lincRNA lincRNA MGP_BALBcJ_T0008388.1 MGP_BALBcJ_G0006801.1 mouse_genomes_project 5 134797561 134798414 + 4933439J24Rik lincRNA lincRNA MGP_BALBcJ_T0001631.1 MGP_BALBcJ_G0001547.1 mouse_genomes_project 5 63405507 63406427 + TEC TEC MGP_BALBcJ_T0008453.1 MGP_BALBcJ_G0006851.1 mouse_genomes_project 5 150375176 150376167 - Gm43452 lincRNA lincRNA MGP_BALBcJ_T0004616.1 MGP_BALBcJ_G0003999.1 mouse_genomes_project 5 5786835 5816022 - Gm5106 antisense antisense MGP_BALBcJ_T0070137.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5430171 5463097 + MGP_BALBcJ_P0070137 Slc25a40 protein_coding protein_coding MGP_BALBcJ_T0070138.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5430179 5435956 + Slc25a40 protein_coding retained_intron MGP_BALBcJ_T0070139.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5430179 5463089 + MGP_BALBcJ_P0070139 Slc25a40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070140.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5430194 5462380 + Slc25a40 protein_coding retained_intron MGP_BALBcJ_T0070141.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5430220 5462380 + MGP_BALBcJ_P0070141 Slc25a40 protein_coding protein_coding MGP_BALBcJ_T0070142.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5432153 5450107 + MGP_BALBcJ_P0070142 Slc25a40 protein_coding protein_coding MGP_BALBcJ_T0070143.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5437432 5437854 + Slc25a40 protein_coding retained_intron MGP_BALBcJ_T0070144.1 MGP_BALBcJ_G0029264.1 mouse_genomes_project 5 5451437 5457588 + Slc25a40 protein_coding retained_intron MGP_BALBcJ_T0010691.1 MGP_BALBcJ_G0008816.1 mouse_genomes_project 5 115223339 115223399 + Mir7030 miRNA miRNA MGP_BALBcJ_T0070952.1 MGP_BALBcJ_G0029408.1 mouse_genomes_project 5 29228678 29245539 - Rbks protein_coding processed_transcript MGP_BALBcJ_T0070953.1 MGP_BALBcJ_G0029408.1 mouse_genomes_project 5 29228678 29301634 - MGP_BALBcJ_P0070953 Rbks protein_coding protein_coding MGP_BALBcJ_T0070956.1 MGP_BALBcJ_G0029408.1 mouse_genomes_project 5 29265035 29290969 - Rbks protein_coding processed_transcript MGP_BALBcJ_T0008427.1 MGP_BALBcJ_G0006834.1 mouse_genomes_project 5 149209705 149214713 + 4930505K14Rik lincRNA lincRNA MGP_BALBcJ_T0074158.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122307557 122372986 - MGP_BALBcJ_P0074158 Ift81 protein_coding protein_coding MGP_BALBcJ_T0074159.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122307561 122317978 - Ift81 protein_coding retained_intron MGP_BALBcJ_T0074160.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122326206 122331402 - Ift81 protein_coding processed_transcript MGP_BALBcJ_T0074161.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122349607 122361945 - MGP_BALBcJ_P0074161 Ift81 protein_coding protein_coding MGP_BALBcJ_T0074162.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122360813 122372974 - Ift81 protein_coding retained_intron MGP_BALBcJ_T0074163.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122360944 122372913 - MGP_BALBcJ_P0074163 Ift81 protein_coding protein_coding MGP_BALBcJ_T0074164.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122360979 122372969 - MGP_BALBcJ_P0074164 Ift81 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074165.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122363410 122365856 - Ift81 protein_coding retained_intron MGP_BALBcJ_T0074166.1 MGP_BALBcJ_G0030030.1 mouse_genomes_project 5 122365519 122372984 - MGP_BALBcJ_P0074166 Ift81 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074476.1 MGP_BALBcJ_G0030075.1 mouse_genomes_project 5 124354497 124362668 + MGP_BALBcJ_P0074476 Tmed2 protein_coding unknown_likely_coding MGP_BALBcJ_T0074477.1 MGP_BALBcJ_G0030075.1 mouse_genomes_project 5 124354590 124362655 + MGP_BALBcJ_P0074477 Tmed2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074478.1 MGP_BALBcJ_G0030075.1 mouse_genomes_project 5 124354964 124362873 + MGP_BALBcJ_P0074478 Tmed2 protein_coding protein_coding MGP_BALBcJ_T0074479.1 MGP_BALBcJ_G0030075.1 mouse_genomes_project 5 124354971 124355388 + Tmed2 protein_coding retained_intron MGP_BALBcJ_T0010673.1 MGP_BALBcJ_G0008798.1 mouse_genomes_project 5 80939912 80940080 - Mir1187 miRNA miRNA MGP_BALBcJ_T0001455.1 MGP_BALBcJ_G0001376.1 mouse_genomes_project 5 11933917 11940135 + TEC TEC MGP_BALBcJ_T0070749.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28497971 28500935 - MGP_BALBcJ_P0070749 Preb protein_coding protein_coding MGP_BALBcJ_T0070750.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28498340 28500281 - Preb protein_coding processed_transcript MGP_BALBcJ_T0070751.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28498466 28499157 - Preb protein_coding retained_intron MGP_BALBcJ_T0070752.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28498616 28502298 - MGP_BALBcJ_P0070752 Preb protein_coding protein_coding MGP_BALBcJ_T0070753.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28498905 28500858 - Preb protein_coding retained_intron MGP_BALBcJ_T0070754.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28500169 28500856 - Preb protein_coding retained_intron MGP_BALBcJ_T0070755.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28500317 28501420 - Preb protein_coding retained_intron MGP_BALBcJ_T0070756.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28500904 28502463 - Preb protein_coding processed_transcript MGP_BALBcJ_T0070757.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28501074 28501748 - Preb protein_coding processed_transcript MGP_BALBcJ_T0070758.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28501132 28502445 - Preb protein_coding retained_intron MGP_BALBcJ_T0070759.1 MGP_BALBcJ_G0029380.1 mouse_genomes_project 5 28501554 28502455 - Preb protein_coding processed_transcript MGP_BALBcJ_T0072373.1 MGP_BALBcJ_G0029641.1 mouse_genomes_project 5 84251742 84284853 + MGP_BALBcJ_P0072373 Stap1 protein_coding protein_coding MGP_BALBcJ_T0072374.1 MGP_BALBcJ_G0029641.1 mouse_genomes_project 5 84251746 84276589 + Stap1 protein_coding retained_intron MGP_BALBcJ_T0072375.1 MGP_BALBcJ_G0029641.1 mouse_genomes_project 5 84251770 84266899 + Stap1 protein_coding retained_intron MGP_BALBcJ_T0072376.1 MGP_BALBcJ_G0029641.1 mouse_genomes_project 5 84251779 84266895 + Stap1 protein_coding retained_intron MGP_BALBcJ_T0072377.1 MGP_BALBcJ_G0029641.1 mouse_genomes_project 5 84251808 84282739 + MGP_BALBcJ_P0072377 Stap1 protein_coding protein_coding MGP_BALBcJ_T0072378.1 MGP_BALBcJ_G0029641.1 mouse_genomes_project 5 84267412 84273651 + Stap1 protein_coding retained_intron MGP_BALBcJ_T0014940.1 MGP_BALBcJ_G0013037.1 mouse_genomes_project 5 45325438 45326243 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004826.1 MGP_BALBcJ_G0004156.1 mouse_genomes_project 5 131703422 131706922 + 4930563F08Rik antisense antisense MGP_BALBcJ_T0015152.1 MGP_BALBcJ_G0013249.1 mouse_genomes_project 5 138420317 138420521 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015126.1 MGP_BALBcJ_G0013223.1 mouse_genomes_project 5 122455870 122456269 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073549.1 MGP_BALBcJ_G0029914.1 mouse_genomes_project 5 113933312 113945987 - MGP_BALBcJ_P0073549 Mmab protein_coding protein_coding MGP_BALBcJ_T0073550.1 MGP_BALBcJ_G0029914.1 mouse_genomes_project 5 113935478 113945948 - MGP_BALBcJ_P0073550 Mmab protein_coding protein_coding MGP_BALBcJ_T0073551.1 MGP_BALBcJ_G0029914.1 mouse_genomes_project 5 113936909 113945919 - MGP_BALBcJ_P0073551 Mmab protein_coding protein_coding MGP_BALBcJ_T0074355.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123545023 123549353 + Kntc1 protein_coding retained_intron MGP_BALBcJ_T0074356.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123545033 123617456 + MGP_BALBcJ_P0074356 Kntc1 protein_coding protein_coding MGP_BALBcJ_T0074357.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123568533 123575631 + Kntc1 protein_coding processed_transcript MGP_BALBcJ_T0074358.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123577177 123578068 + MGP_BALBcJ_P0074358 Kntc1 protein_coding protein_coding MGP_BALBcJ_T0074359.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123583199 123586114 + Kntc1 protein_coding retained_intron MGP_BALBcJ_T0074360.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123607329 123617454 + MGP_BALBcJ_P0074360 Kntc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074361.1 MGP_BALBcJ_G0030055.1 mouse_genomes_project 5 123615403 123617455 + Kntc1 protein_coding retained_intron MGP_BALBcJ_T0099964.1 MGP_BALBcJ_G0038000.1 mouse_genomes_project 5 115057820 115057961 + Gm24407 snRNA snRNA MGP_BALBcJ_T0015118.1 MGP_BALBcJ_G0013215.1 mouse_genomes_project 5 116902217 116902595 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001792.1 MGP_BALBcJ_G0001707.1 mouse_genomes_project 5 120213427 120214412 - TEC TEC MGP_BALBcJ_T0076030.1 MGP_BALBcJ_G0030384.1 mouse_genomes_project 5 149857787 149869127 + Medag protein_coding retained_intron MGP_BALBcJ_T0076031.1 MGP_BALBcJ_G0030384.1 mouse_genomes_project 5 149857993 149876718 + MGP_BALBcJ_P0076031 Medag protein_coding protein_coding MGP_BALBcJ_T0018145.1 MGP_BALBcJ_G0015550.1 mouse_genomes_project 5 123151559 123152909 + 5830487J09Rik processed_transcript sense_intronic MGP_BALBcJ_T0018146.1 MGP_BALBcJ_G0015550.1 mouse_genomes_project 5 123151954 123153868 + 5830487J09Rik processed_transcript TEC MGP_BALBcJ_T0014925.1 MGP_BALBcJ_G0013022.1 mouse_genomes_project 5 34977800 34977951 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001563.1 MGP_BALBcJ_G0001480.1 mouse_genomes_project 5 46617326 46619273 - TEC TEC MGP_BALBcJ_T0074175.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466059 122488362 + MGP_BALBcJ_P0074175 P2rx4 protein_coding protein_coding MGP_BALBcJ_T0074176.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466084 122470190 + P2rx4 protein_coding retained_intron MGP_BALBcJ_T0074177.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466085 122478128 + P2rx4 protein_coding retained_intron MGP_BALBcJ_T0074178.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466095 122483988 + MGP_BALBcJ_P0074178 P2rx4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074179.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466099 122487668 + MGP_BALBcJ_P0074179 P2rx4 protein_coding protein_coding MGP_BALBcJ_T0074180.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466169 122486947 + MGP_BALBcJ_P0074180 P2rx4 protein_coding protein_coding MGP_BALBcJ_T0074181.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122466169 122486947 + MGP_BALBcJ_P0074181 P2rx4 protein_coding protein_coding MGP_BALBcJ_T0074182.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122483276 122483887 + P2rx4 protein_coding retained_intron MGP_BALBcJ_T0074183.1 MGP_BALBcJ_G0030032.1 mouse_genomes_project 5 122486287 122487209 + P2rx4 protein_coding processed_transcript MGP_BALBcJ_T0072950.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103194302 103200232 + MGP_BALBcJ_P0072950 Spp1 protein_coding protein_coding MGP_BALBcJ_T0072951.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103194302 103200230 + MGP_BALBcJ_P0072951 Spp1 protein_coding protein_coding MGP_BALBcJ_T0072952.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103194305 103200229 + MGP_BALBcJ_P0072952 Spp1 protein_coding protein_coding MGP_BALBcJ_T0072953.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103194323 103198725 + MGP_BALBcJ_P0072953 Spp1 protein_coding protein_coding MGP_BALBcJ_T0072954.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103194326 103198687 + MGP_BALBcJ_P0072954 Spp1 protein_coding protein_coding MGP_BALBcJ_T0072955.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103194342 103196893 + MGP_BALBcJ_P0072955 Spp1 protein_coding protein_coding MGP_BALBcJ_T0072956.1 MGP_BALBcJ_G0029790.1 mouse_genomes_project 5 103195374 103200225 + MGP_BALBcJ_P0072956 Spp1 protein_coding protein_coding MGP_BALBcJ_T0008126.1 MGP_BALBcJ_G0006623.1 mouse_genomes_project 5 62338268 62351719 - 1700027F09Rik lincRNA lincRNA MGP_BALBcJ_T0075814.1 MGP_BALBcJ_G0030340.1 mouse_genomes_project 5 145184143 145213209 - MGP_BALBcJ_P0075814 Kpna7 protein_coding protein_coding MGP_BALBcJ_T0075815.1 MGP_BALBcJ_G0030340.1 mouse_genomes_project 5 145184351 145212199 - MGP_BALBcJ_P0075815 Kpna7 protein_coding protein_coding MGP_BALBcJ_T0075816.1 MGP_BALBcJ_G0030340.1 mouse_genomes_project 5 145186371 145209716 - MGP_BALBcJ_P0075816 Kpna7 protein_coding protein_coding MGP_BALBcJ_T0075817.1 MGP_BALBcJ_G0030340.1 mouse_genomes_project 5 145194826 145206952 - Kpna7 protein_coding processed_transcript MGP_BALBcJ_T0075818.1 MGP_BALBcJ_G0030340.1 mouse_genomes_project 5 145203318 145211935 - MGP_BALBcJ_P0075818 Kpna7 protein_coding protein_coding MGP_BALBcJ_T0075819.1 MGP_BALBcJ_G0030340.1 mouse_genomes_project 5 145209666 145294657 - MGP_BALBcJ_P0075819 Kpna7 protein_coding protein_coding MGP_BALBcJ_T0075155.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209110 137212431 + MGP_BALBcJ_P0075155 Ache protein_coding protein_coding MGP_BALBcJ_T0075156.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209357 137212431 + MGP_BALBcJ_P0075156 Ache protein_coding protein_coding MGP_BALBcJ_T0075157.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209357 137212431 + MGP_BALBcJ_P0075157 Ache protein_coding protein_coding MGP_BALBcJ_T0075158.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209868 137216752 + MGP_BALBcJ_P0075158 Ache protein_coding protein_coding MGP_BALBcJ_T0075159.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209874 137216747 + MGP_BALBcJ_P0075159 Ache protein_coding protein_coding MGP_BALBcJ_T0075160.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209875 137216746 + MGP_BALBcJ_P0075160 Ache protein_coding protein_coding MGP_BALBcJ_T0075161.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137209876 137214625 + Ache protein_coding retained_intron MGP_BALBcJ_T0075162.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137211364 137212431 + MGP_BALBcJ_P0075162 Ache protein_coding protein_coding MGP_BALBcJ_T0075163.1 MGP_BALBcJ_G0030198.1 mouse_genomes_project 5 137211523 137212431 + MGP_BALBcJ_P0075163 Ache protein_coding protein_coding MGP_BALBcJ_T0015181.1 MGP_BALBcJ_G0013278.1 mouse_genomes_project 5 146308234 146308435 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072208.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73547667 73627535 + MGP_BALBcJ_P0072208 Kit protein_coding protein_coding MGP_BALBcJ_T0072209.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73547706 73627535 + MGP_BALBcJ_P0072209 Kit protein_coding protein_coding MGP_BALBcJ_T0072210.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73583848 73594224 + Kit protein_coding retained_intron MGP_BALBcJ_T0072211.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73610380 73612290 + Kit protein_coding retained_intron MGP_BALBcJ_T0072212.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73614273 73616804 + Kit protein_coding retained_intron MGP_BALBcJ_T0072213.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73616516 73623669 + Kit protein_coding retained_intron MGP_BALBcJ_T0072214.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73619910 73627507 + Kit protein_coding retained_intron MGP_BALBcJ_T0072215.1 MGP_BALBcJ_G0029615.1 mouse_genomes_project 5 73620009 73623103 + Kit protein_coding retained_intron MGP_BALBcJ_T0070801.1 MGP_BALBcJ_G0029388.1 mouse_genomes_project 5 28682098 28682865 - MGP_BALBcJ_P0070801 Ucn protein_coding protein_coding MGP_BALBcJ_T0070802.1 MGP_BALBcJ_G0029388.1 mouse_genomes_project 5 28682098 28682865 - MGP_BALBcJ_P0070802 Ucn protein_coding protein_coding MGP_BALBcJ_T0001539.1 MGP_BALBcJ_G0001457.1 mouse_genomes_project 5 42390099 42392319 - TEC TEC MGP_BALBcJ_T0001880.1 MGP_BALBcJ_G0001793.1 mouse_genomes_project 5 136268936 136273282 - TEC TEC MGP_BALBcJ_T0072764.1 MGP_BALBcJ_G0029749.1 mouse_genomes_project 5 96926745 96951730 + MGP_BALBcJ_P0072764 Fgf5 protein_coding protein_coding MGP_BALBcJ_T0072765.1 MGP_BALBcJ_G0029749.1 mouse_genomes_project 5 96926973 96950167 + MGP_BALBcJ_P0072765 Fgf5 protein_coding protein_coding MGP_BALBcJ_T0004717.1 MGP_BALBcJ_G0004081.1 mouse_genomes_project 5 90639748 90653449 + Gm43599 antisense antisense MGP_BALBcJ_T0001755.1 MGP_BALBcJ_G0001670.1 mouse_genomes_project 5 110882736 110884856 + TEC TEC MGP_BALBcJ_T0075266.1 MGP_BALBcJ_G0030216.1 mouse_genomes_project 5 137581464 137582998 + MGP_BALBcJ_P0075266 Sap25 protein_coding protein_coding MGP_BALBcJ_T0075267.1 MGP_BALBcJ_G0030216.1 mouse_genomes_project 5 137581567 137583032 + MGP_BALBcJ_P0075267 Sap25 protein_coding protein_coding MGP_BALBcJ_T0075268.1 MGP_BALBcJ_G0030216.1 mouse_genomes_project 5 137581625 137582471 + Sap25 protein_coding retained_intron MGP_BALBcJ_T0075269.1 MGP_BALBcJ_G0030216.1 mouse_genomes_project 5 137582073 137582677 + Sap25 protein_coding retained_intron MGP_BALBcJ_T0075270.1 MGP_BALBcJ_G0030216.1 mouse_genomes_project 5 137582307 137582967 + Sap25 protein_coding retained_intron MGP_BALBcJ_T0075271.1 MGP_BALBcJ_G0030216.1 mouse_genomes_project 5 137582478 137583029 + Sap25 protein_coding retained_intron MGP_BALBcJ_T0075560.1 MGP_BALBcJ_G0030284.1 mouse_genomes_project 5 140461169 140510895 - MGP_BALBcJ_P0075560 Snx8 protein_coding protein_coding MGP_BALBcJ_T0075561.1 MGP_BALBcJ_G0030284.1 mouse_genomes_project 5 140461174 140481208 - MGP_BALBcJ_P0075561 Snx8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075562.1 MGP_BALBcJ_G0030284.1 mouse_genomes_project 5 140473581 140474340 - Snx8 protein_coding retained_intron MGP_BALBcJ_T0075563.1 MGP_BALBcJ_G0030284.1 mouse_genomes_project 5 140474257 140487875 - MGP_BALBcJ_P0075563 Snx8 protein_coding protein_coding MGP_BALBcJ_T0075564.1 MGP_BALBcJ_G0030284.1 mouse_genomes_project 5 140474273 140510895 - MGP_BALBcJ_P0075564 Snx8 protein_coding protein_coding MGP_BALBcJ_T0074435.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124175749 124234795 - MGP_BALBcJ_P0074435 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074436.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124175755 124234572 - MGP_BALBcJ_P0074436 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074437.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124181569 124223122 - MGP_BALBcJ_P0074437 Sbno1 protein_coding unknown_likely_coding MGP_BALBcJ_T0074438.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124181572 124223122 - MGP_BALBcJ_P0074438 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074439.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124183489 124192101 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0074440.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124193264 124194236 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0074441.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124197963 124198615 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0074442.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124198611 124200123 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0074443.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124200657 124234567 - MGP_BALBcJ_P0074443 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074444.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124200673 124204721 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0074445.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124200675 124234882 - MGP_BALBcJ_P0074445 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074446.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124204386 124205577 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0074447.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124204386 124234838 - MGP_BALBcJ_P0074447 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074448.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124207061 124234566 - MGP_BALBcJ_P0074448 Sbno1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074449.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124208434 124214359 - MGP_BALBcJ_P0074449 Sbno1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074450.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124215724 124234558 - MGP_BALBcJ_P0074450 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074451.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124218711 124234542 - MGP_BALBcJ_P0074451 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074452.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124218943 124228913 - MGP_BALBcJ_P0074452 Sbno1 protein_coding protein_coding MGP_BALBcJ_T0074453.1 MGP_BALBcJ_G0030070.1 mouse_genomes_project 5 124232486 124234516 - Sbno1 protein_coding retained_intron MGP_BALBcJ_T0070605.1 MGP_BALBcJ_G0029353.1 mouse_genomes_project 5 27024727 27030156 - MGP_BALBcJ_P0070605 Mnx1 protein_coding protein_coding MGP_BALBcJ_T0070606.1 MGP_BALBcJ_G0029353.1 mouse_genomes_project 5 27024954 27030156 - MGP_BALBcJ_P0070606 Mnx1 protein_coding protein_coding MGP_BALBcJ_T0075254.1 MGP_BALBcJ_G0030213.1 mouse_genomes_project 5 137545785 137562375 - MGP_BALBcJ_P0075254 Fbxo24 protein_coding protein_coding MGP_BALBcJ_T0075255.1 MGP_BALBcJ_G0030213.1 mouse_genomes_project 5 137545785 137558493 - MGP_BALBcJ_P0075255 Fbxo24 protein_coding protein_coding MGP_BALBcJ_T0075256.1 MGP_BALBcJ_G0030213.1 mouse_genomes_project 5 137545788 137562329 - MGP_BALBcJ_P0075256 Fbxo24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001514.1 MGP_BALBcJ_G0001432.1 mouse_genomes_project 5 35810350 35811758 - TEC TEC MGP_BALBcJ_T0072701.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436115 91519378 + MGP_BALBcJ_P0072701 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072702.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436116 91436756 + Sept11 protein_coding retained_intron MGP_BALBcJ_T0072703.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436116 91514395 + MGP_BALBcJ_P0072703 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072704.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436126 91505897 + MGP_BALBcJ_P0072704 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072705.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436129 91520856 + MGP_BALBcJ_P0072705 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072706.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436204 91520866 + MGP_BALBcJ_P0072706 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072707.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436214 91493054 + MGP_BALBcJ_P0072707 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072708.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91436249 91520496 + MGP_BALBcJ_P0072708 Sept11 protein_coding protein_coding MGP_BALBcJ_T0072709.1 MGP_BALBcJ_G0029734.1 mouse_genomes_project 5 91493013 91502310 + Sept11 protein_coding retained_intron MGP_BALBcJ_T0001856.1 MGP_BALBcJ_G0001770.1 mouse_genomes_project 5 131809547 131816374 - TEC TEC MGP_BALBcJ_T0001584.1 MGP_BALBcJ_G0001501.1 mouse_genomes_project 5 49127501 49129432 + TEC TEC MGP_BALBcJ_T0004796.1 MGP_BALBcJ_G0004135.1 mouse_genomes_project 5 121586240 121586874 + 1700008B11Rik antisense antisense MGP_BALBcJ_T0074875.1 MGP_BALBcJ_G0030143.1 mouse_genomes_project 5 134792021 134793299 - MGP_BALBcJ_P0074875 Cldn13 protein_coding protein_coding MGP_BALBcJ_T0001488.1 MGP_BALBcJ_G0001407.1 mouse_genomes_project 5 28755563 28759540 - TEC TEC MGP_BALBcJ_T0014924.1 MGP_BALBcJ_G0013021.1 mouse_genomes_project 5 33619633 33619926 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098768.1 MGP_BALBcJ_G0036822.1 mouse_genomes_project 5 90782697 90783123 + Gm26039 scaRNA scaRNA MGP_BALBcJ_T0071079.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405325 31413489 + MGP_BALBcJ_P0071079 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071080.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405375 31420823 + MGP_BALBcJ_P0071080 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071081.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405375 31420823 + MGP_BALBcJ_P0071081 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071082.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405375 31420822 + MGP_BALBcJ_P0071082 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071083.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405442 31420818 + MGP_BALBcJ_P0071083 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071084.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405449 31419259 + MGP_BALBcJ_P0071084 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071085.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405957 31420823 + MGP_BALBcJ_P0071085 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071086.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31405957 31420823 + MGP_BALBcJ_P0071086 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071087.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31406095 31413658 + MGP_BALBcJ_P0071087 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071088.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31406471 31416442 + Fgfr3 protein_coding retained_intron MGP_BALBcJ_T0071089.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31407423 31413502 + MGP_BALBcJ_P0071089 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071090.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31413389 31416395 + MGP_BALBcJ_P0071090 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071091.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31413615 31416935 + Fgfr3 protein_coding retained_intron MGP_BALBcJ_T0071092.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31413872 31417413 + MGP_BALBcJ_P0071092 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071093.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31416903 31418504 + MGP_BALBcJ_P0071093 Fgfr3 protein_coding protein_coding MGP_BALBcJ_T0071094.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31417343 31418565 + Fgfr3 protein_coding retained_intron MGP_BALBcJ_T0071095.1 MGP_BALBcJ_G0029429.1 mouse_genomes_project 5 31418256 31419216 + Fgfr3 protein_coding retained_intron MGP_BALBcJ_T0101220.1 MGP_BALBcJ_G0039256.1 mouse_genomes_project 5 106892865 106892959 + Snord21 snoRNA snoRNA MGP_BALBcJ_T0075008.1 MGP_BALBcJ_G0030170.1 mouse_genomes_project 5 135798913 135800750 + MGP_BALBcJ_P0075008 Hspb1 protein_coding protein_coding MGP_BALBcJ_T0070046.1 MGP_BALBcJ_G0029252.1 mouse_genomes_project 5 2450645 2489480 - MGP_BALBcJ_P0070046 1700015F17Rik protein_coding protein_coding MGP_BALBcJ_T0070047.1 MGP_BALBcJ_G0029252.1 mouse_genomes_project 5 2450645 2470745 - MGP_BALBcJ_P0070047 1700015F17Rik protein_coding protein_coding MGP_BALBcJ_T0070048.1 MGP_BALBcJ_G0029252.1 mouse_genomes_project 5 2450650 2489417 - MGP_BALBcJ_P0070048 1700015F17Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001848.1 MGP_BALBcJ_G0001762.1 mouse_genomes_project 5 131458700 131461560 - TEC TEC MGP_BALBcJ_T0070545.1 MGP_BALBcJ_G0029339.1 mouse_genomes_project 5 23007451 23009412 + MGP_BALBcJ_P0070545 Cct8l1 protein_coding protein_coding MGP_BALBcJ_T0015064.1 MGP_BALBcJ_G0013161.1 mouse_genomes_project 5 100231010 100231809 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073828.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117391427 117478763 + MGP_BALBcJ_P0073828 Nos1 protein_coding protein_coding MGP_BALBcJ_T0073829.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117391450 117478393 + Nos1 protein_coding processed_transcript MGP_BALBcJ_T0073830.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117453117 117574792 + MGP_BALBcJ_P0073830 Nos1 protein_coding protein_coding MGP_BALBcJ_T0073831.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117453453 117570292 + MGP_BALBcJ_P0073831 Nos1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073832.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117478420 117569838 + MGP_BALBcJ_P0073832 Nos1 protein_coding protein_coding MGP_BALBcJ_T0073833.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117478425 117569742 + MGP_BALBcJ_P0073833 Nos1 protein_coding protein_coding MGP_BALBcJ_T0073834.1 MGP_BALBcJ_G0029965.1 mouse_genomes_project 5 117532891 117539427 + Nos1 protein_coding processed_transcript MGP_BALBcJ_T0008301.1 MGP_BALBcJ_G0006744.1 mouse_genomes_project 5 115893452 115895667 + Gm13839 lincRNA lincRNA MGP_BALBcJ_T0010710.1 MGP_BALBcJ_G0008835.1 mouse_genomes_project 5 137218909 137218974 - Mir7036 miRNA miRNA MGP_BALBcJ_T0070360.1 MGP_BALBcJ_G0029305.1 mouse_genomes_project 5 20141325 20694998 + MGP_BALBcJ_P0070360 Lhfpl3 protein_coding protein_coding MGP_BALBcJ_T0070361.1 MGP_BALBcJ_G0029305.1 mouse_genomes_project 5 20525673 20694989 + MGP_BALBcJ_P0070361 Lhfpl3 protein_coding protein_coding MGP_BALBcJ_T0001764.1 MGP_BALBcJ_G0001679.1 mouse_genomes_project 5 112812453 112813751 + TEC TEC MGP_BALBcJ_T0074369.1 MGP_BALBcJ_G0030059.1 mouse_genomes_project 5 123725047 123739728 + MGP_BALBcJ_P0074369 Gm43518 protein_coding protein_coding MGP_BALBcJ_T0071326.1 MGP_BALBcJ_G0029463.1 mouse_genomes_project 5 33719291 34099213 - MGP_BALBcJ_P0071326 Sorcs2 protein_coding protein_coding MGP_BALBcJ_T0071327.1 MGP_BALBcJ_G0029463.1 mouse_genomes_project 5 33763202 34099196 - Sorcs2 protein_coding retained_intron MGP_BALBcJ_T0071328.1 MGP_BALBcJ_G0029463.1 mouse_genomes_project 5 33767498 33967804 - MGP_BALBcJ_P0071328 Sorcs2 protein_coding protein_coding MGP_BALBcJ_T0071329.1 MGP_BALBcJ_G0029463.1 mouse_genomes_project 5 33852800 34099228 - MGP_BALBcJ_P0071329 Sorcs2 protein_coding protein_coding MGP_BALBcJ_T0071330.1 MGP_BALBcJ_G0029463.1 mouse_genomes_project 5 33853830 34066820 - Sorcs2 protein_coding processed_transcript MGP_BALBcJ_T0074520.1 MGP_BALBcJ_G0030083.1 mouse_genomes_project 5 124759525 124768823 + MGP_BALBcJ_P0074520 Fam101a protein_coding protein_coding MGP_BALBcJ_T0074521.1 MGP_BALBcJ_G0030083.1 mouse_genomes_project 5 124759779 124768822 + MGP_BALBcJ_P0074521 Fam101a protein_coding protein_coding MGP_BALBcJ_T0074522.1 MGP_BALBcJ_G0030083.1 mouse_genomes_project 5 124766386 124767766 + Fam101a protein_coding processed_transcript MGP_BALBcJ_T0015009.1 MGP_BALBcJ_G0013106.1 mouse_genomes_project 5 74067844 74068196 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071486.1 MGP_BALBcJ_G0029491.1 mouse_genomes_project 5 36335478 36351784 - MGP_BALBcJ_P0071486 Zfp518b protein_coding protein_coding MGP_BALBcJ_T0071487.1 MGP_BALBcJ_G0029491.1 mouse_genomes_project 5 36335480 36351708 - MGP_BALBcJ_P0071487 Zfp518b protein_coding protein_coding MGP_BALBcJ_T0071488.1 MGP_BALBcJ_G0029491.1 mouse_genomes_project 5 36341166 36351784 - MGP_BALBcJ_P0071488 Zfp518b protein_coding protein_coding MGP_BALBcJ_T0071489.1 MGP_BALBcJ_G0029491.1 mouse_genomes_project 5 36341617 36351715 - MGP_BALBcJ_P0071489 Zfp518b protein_coding protein_coding MGP_BALBcJ_T0001842.1 MGP_BALBcJ_G0001756.1 mouse_genomes_project 5 130720570 130722673 - TEC TEC MGP_BALBcJ_T0075746.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045402 144070586 + Pms2 protein_coding retained_intron MGP_BALBcJ_T0075747.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045402 144070586 + Pms2 protein_coding processed_transcript MGP_BALBcJ_T0075748.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045402 144070586 + MGP_BALBcJ_P0075748 Pms2 protein_coding protein_coding MGP_BALBcJ_T0075749.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045428 144067828 + Pms2 protein_coding processed_transcript MGP_BALBcJ_T0075750.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045428 144068066 + Pms2 protein_coding processed_transcript MGP_BALBcJ_T0075751.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045437 144053916 + Pms2 protein_coding processed_transcript MGP_BALBcJ_T0075752.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045442 144051012 + Pms2 protein_coding processed_transcript MGP_BALBcJ_T0075753.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045463 144063116 + Pms2 protein_coding retained_intron MGP_BALBcJ_T0075754.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045463 144049786 + Pms2 protein_coding retained_intron MGP_BALBcJ_T0075755.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045495 144067782 + MGP_BALBcJ_P0075755 Pms2 protein_coding protein_coding MGP_BALBcJ_T0075756.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144045599 144048955 + Pms2 protein_coding processed_transcript MGP_BALBcJ_T0075757.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144048812 144049407 + Pms2 protein_coding retained_intron MGP_BALBcJ_T0075758.1 MGP_BALBcJ_G0030326.1 mouse_genomes_project 5 144055836 144061725 + MGP_BALBcJ_P0075758 Pms2 protein_coding protein_coding MGP_BALBcJ_T0001570.1 MGP_BALBcJ_G0001487.1 mouse_genomes_project 5 46740087 46743543 + TEC TEC MGP_BALBcJ_T0001847.1 MGP_BALBcJ_G0001761.1 mouse_genomes_project 5 131444633 131445333 - TEC TEC MGP_BALBcJ_T0072881.1 MGP_BALBcJ_G0029771.1 mouse_genomes_project 5 100390409 100397224 - MGP_BALBcJ_P0072881 Nkx6-1 protein_coding protein_coding MGP_BALBcJ_T0004793.1 MGP_BALBcJ_G0004132.1 mouse_genomes_project 5 121108329 121118226 + Gm42917 antisense antisense MGP_BALBcJ_T0004652.1 MGP_BALBcJ_G0004029.1 mouse_genomes_project 5 33281683 33289345 - 4931431C16Rik antisense antisense MGP_BALBcJ_T0072092.1 MGP_BALBcJ_G0029594.1 mouse_genomes_project 5 70860785 70931601 + MGP_BALBcJ_P0072092 Slain2 protein_coding protein_coding MGP_BALBcJ_T0072093.1 MGP_BALBcJ_G0029594.1 mouse_genomes_project 5 70860850 70931583 + MGP_BALBcJ_P0072093 Slain2 protein_coding protein_coding MGP_BALBcJ_T0072094.1 MGP_BALBcJ_G0029594.1 mouse_genomes_project 5 70860897 70864967 + Slain2 protein_coding retained_intron MGP_BALBcJ_T0072095.1 MGP_BALBcJ_G0029594.1 mouse_genomes_project 5 70861149 70903945 + MGP_BALBcJ_P0072095 Slain2 protein_coding protein_coding MGP_BALBcJ_T0072096.1 MGP_BALBcJ_G0029594.1 mouse_genomes_project 5 70894988 70927474 + Slain2 protein_coding retained_intron MGP_BALBcJ_T0001510.1 MGP_BALBcJ_G0001428.1 mouse_genomes_project 5 34324254 34326811 + TEC TEC MGP_BALBcJ_T0074402.1 MGP_BALBcJ_G0030065.1 mouse_genomes_project 5 123918975 123919929 + MGP_BALBcJ_P0074402 Arl6ip4 protein_coding protein_coding MGP_BALBcJ_T0074403.1 MGP_BALBcJ_G0030065.1 mouse_genomes_project 5 123918985 123921083 + MGP_BALBcJ_P0074403 Arl6ip4 protein_coding protein_coding MGP_BALBcJ_T0074404.1 MGP_BALBcJ_G0030065.1 mouse_genomes_project 5 123919008 123920983 + MGP_BALBcJ_P0074404 Arl6ip4 protein_coding protein_coding MGP_BALBcJ_T0074405.1 MGP_BALBcJ_G0030065.1 mouse_genomes_project 5 123919565 123920921 + MGP_BALBcJ_P0074405 Arl6ip4 protein_coding protein_coding MGP_BALBcJ_T0074406.1 MGP_BALBcJ_G0030065.1 mouse_genomes_project 5 123920197 123921078 + MGP_BALBcJ_P0074406 Arl6ip4 protein_coding protein_coding MGP_BALBcJ_T0015111.1 MGP_BALBcJ_G0013208.1 mouse_genomes_project 5 114417826 114418162 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072010.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67455869 67471936 + MGP_BALBcJ_P0072010 Guf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072011.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67455899 67465656 + Guf1 protein_coding retained_intron MGP_BALBcJ_T0072012.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67455899 67466931 + MGP_BALBcJ_P0072012 Guf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072013.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67455907 67473310 + MGP_BALBcJ_P0072013 Guf1 protein_coding protein_coding MGP_BALBcJ_T0072014.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67455934 67471937 + MGP_BALBcJ_P0072014 Guf1 protein_coding protein_coding MGP_BALBcJ_T0072015.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67456019 67467787 + MGP_BALBcJ_P0072015 Guf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072016.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67456040 67471981 + MGP_BALBcJ_P0072016 Guf1 protein_coding protein_coding MGP_BALBcJ_T0072017.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67465670 67476179 + Guf1 protein_coding retained_intron MGP_BALBcJ_T0072018.1 MGP_BALBcJ_G0029580.1 mouse_genomes_project 5 67470247 67471689 + Guf1 protein_coding retained_intron MGP_BALBcJ_T0014865.1 MGP_BALBcJ_G0012962.1 mouse_genomes_project 5 19124718 19125001 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071143.1 MGP_BALBcJ_G0029437.1 mouse_genomes_project 5 31867866 31869320 - Mxd4 protein_coding processed_transcript MGP_BALBcJ_T0071144.1 MGP_BALBcJ_G0029437.1 mouse_genomes_project 5 31867870 31881676 - MGP_BALBcJ_P0071144 Mxd4 protein_coding protein_coding MGP_BALBcJ_T0071145.1 MGP_BALBcJ_G0029437.1 mouse_genomes_project 5 31870545 31881686 - MGP_BALBcJ_P0071145 Mxd4 protein_coding protein_coding MGP_BALBcJ_T0071146.1 MGP_BALBcJ_G0029437.1 mouse_genomes_project 5 31873711 31878339 - Mxd4 protein_coding retained_intron MGP_BALBcJ_T0008143.1 MGP_BALBcJ_G0006634.1 mouse_genomes_project 5 71878516 71888446 + Gm43801 lincRNA lincRNA MGP_BALBcJ_T0075375.1 MGP_BALBcJ_G0030242.1 mouse_genomes_project 5 138161454 138167858 + MGP_BALBcJ_P0075375 Cnpy4 protein_coding protein_coding MGP_BALBcJ_T0075376.1 MGP_BALBcJ_G0030242.1 mouse_genomes_project 5 138163855 138166537 + MGP_BALBcJ_P0075376 Cnpy4 protein_coding protein_coding MGP_BALBcJ_T0075377.1 MGP_BALBcJ_G0030242.1 mouse_genomes_project 5 138164050 138166090 + Cnpy4 protein_coding retained_intron MGP_BALBcJ_T0001600.1 MGP_BALBcJ_G0001517.1 mouse_genomes_project 5 55228066 55230858 + TEC TEC MGP_BALBcJ_T0075321.1 MGP_BALBcJ_G0030228.1 mouse_genomes_project 5 137920544 137930436 - MGP_BALBcJ_P0075321 Gjc3 protein_coding protein_coding MGP_BALBcJ_T0075322.1 MGP_BALBcJ_G0030228.1 mouse_genomes_project 5 137929849 137930433 - Gjc3 protein_coding retained_intron MGP_BALBcJ_T0102565.1 MGP_BALBcJ_G0040381.1 mouse_genomes_project 5 82003703 82004292 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010649.1 MGP_BALBcJ_G0008774.1 mouse_genomes_project 5 22082541 22082639 + Mir671 miRNA miRNA MGP_BALBcJ_T0008372.1 MGP_BALBcJ_G0006792.1 mouse_genomes_project 5 128246998 128247871 + Gm42500 lincRNA lincRNA MGP_BALBcJ_T0071532.1 MGP_BALBcJ_G0029502.1 mouse_genomes_project 5 41466268 41473828 + MGP_BALBcJ_P0071532 Bst1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071533.1 MGP_BALBcJ_G0029502.1 mouse_genomes_project 5 41466274 41484303 + MGP_BALBcJ_P0071533 Bst1 protein_coding protein_coding MGP_BALBcJ_T0071534.1 MGP_BALBcJ_G0029502.1 mouse_genomes_project 5 41469057 41483780 + Bst1 protein_coding retained_intron MGP_BALBcJ_T0071535.1 MGP_BALBcJ_G0029502.1 mouse_genomes_project 5 41477426 41482724 + Bst1 protein_coding retained_intron MGP_BALBcJ_T0073208.1 MGP_BALBcJ_G0029846.1 mouse_genomes_project 5 108284468 108296114 - MGP_BALBcJ_P0073208 protein_coding protein_coding MGP_BALBcJ_T0098607.1 MGP_BALBcJ_G0036661.1 mouse_genomes_project 5 21133300 21133393 - Gm24009 rRNA rRNA MGP_BALBcJ_T0072982.1 MGP_BALBcJ_G0029802.1 mouse_genomes_project 5 104466002 104561069 + MGP_BALBcJ_P0072982 Lrrc8c protein_coding protein_coding MGP_BALBcJ_T0072983.1 MGP_BALBcJ_G0029802.1 mouse_genomes_project 5 104466030 104527132 + MGP_BALBcJ_P0072983 Lrrc8c protein_coding protein_coding MGP_BALBcJ_T0072984.1 MGP_BALBcJ_G0029802.1 mouse_genomes_project 5 104466087 104491648 + Lrrc8c protein_coding retained_intron MGP_BALBcJ_T0072985.1 MGP_BALBcJ_G0029802.1 mouse_genomes_project 5 104505911 104554914 + MGP_BALBcJ_P0072985 Lrrc8c protein_coding protein_coding MGP_BALBcJ_T0070926.1 MGP_BALBcJ_G0029405.1 mouse_genomes_project 5 29117766 29130371 - MGP_BALBcJ_P0070926 Supt7l protein_coding protein_coding MGP_BALBcJ_T0070927.1 MGP_BALBcJ_G0029405.1 mouse_genomes_project 5 29119704 29130460 - MGP_BALBcJ_P0070927 Supt7l protein_coding protein_coding MGP_BALBcJ_T0070928.1 MGP_BALBcJ_G0029405.1 mouse_genomes_project 5 29125279 29131536 - Supt7l protein_coding retained_intron MGP_BALBcJ_T0070929.1 MGP_BALBcJ_G0029405.1 mouse_genomes_project 5 29129185 29130431 - Supt7l protein_coding retained_intron MGP_BALBcJ_T0071717.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51152489 51337117 + MGP_BALBcJ_P0071717 Rbpj protein_coding protein_coding MGP_BALBcJ_T0071718.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51244270 51245801 + Rbpj protein_coding retained_intron MGP_BALBcJ_T0071719.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51244398 51347193 + MGP_BALBcJ_P0071719 Rbpj protein_coding protein_coding MGP_BALBcJ_T0071720.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51280506 51347197 + MGP_BALBcJ_P0071720 Rbpj protein_coding protein_coding MGP_BALBcJ_T0071721.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51280660 51347197 + MGP_BALBcJ_P0071721 Rbpj protein_coding protein_coding MGP_BALBcJ_T0071722.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51280997 51342633 + MGP_BALBcJ_P0071722 Rbpj protein_coding protein_coding MGP_BALBcJ_T0071723.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51310142 51332665 + Rbpj protein_coding processed_transcript MGP_BALBcJ_T0071724.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51324865 51328263 + Rbpj protein_coding retained_intron MGP_BALBcJ_T0071725.1 MGP_BALBcJ_G0029531.1 mouse_genomes_project 5 51332423 51340060 + Rbpj protein_coding retained_intron MGP_BALBcJ_T0011811.1 MGP_BALBcJ_G0009913.1 mouse_genomes_project 5 90712472 90718471 - MGP_BALBcJ_P0011811 Cxcl11 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011812.1 MGP_BALBcJ_G0009913.1 mouse_genomes_project 5 90712475 90716227 - MGP_BALBcJ_P0011812 Cxcl11 polymorphic_pseudogene protein_coding MGP_BALBcJ_T0001785.1 MGP_BALBcJ_G0001700.1 mouse_genomes_project 5 118243770 118244790 + TEC TEC MGP_BALBcJ_T0015151.1 MGP_BALBcJ_G0013248.1 mouse_genomes_project 5 138080909 138081111 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072771.1 MGP_BALBcJ_G0029752.1 mouse_genomes_project 5 97537497 97557112 + MGP_BALBcJ_P0072771 Bmp3 protein_coding protein_coding MGP_BALBcJ_T0072772.1 MGP_BALBcJ_G0029752.1 mouse_genomes_project 5 97537521 97567857 + MGP_BALBcJ_P0072772 Bmp3 protein_coding protein_coding MGP_BALBcJ_T0072773.1 MGP_BALBcJ_G0029752.1 mouse_genomes_project 5 97537533 97567857 + MGP_BALBcJ_P0072773 Bmp3 protein_coding protein_coding MGP_BALBcJ_T0071201.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328516 32332068 - MGP_BALBcJ_P0071201 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071202.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328520 32332091 - MGP_BALBcJ_P0071202 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071203.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328521 32329602 - Mfsd10 protein_coding retained_intron MGP_BALBcJ_T0071204.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328522 32329504 - Mfsd10 protein_coding retained_intron MGP_BALBcJ_T0071205.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328523 32332071 - MGP_BALBcJ_P0071205 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071206.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328599 32331682 - MGP_BALBcJ_P0071206 Mfsd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071207.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328789 32329766 - Mfsd10 protein_coding retained_intron MGP_BALBcJ_T0071208.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32328869 32330999 - Mfsd10 protein_coding retained_intron MGP_BALBcJ_T0071209.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329188 32330400 - MGP_BALBcJ_P0071209 Mfsd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071210.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329505 32329940 - MGP_BALBcJ_P0071210 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071211.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329529 32330991 - MGP_BALBcJ_P0071211 Mfsd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071212.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329725 32330630 - MGP_BALBcJ_P0071212 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071213.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329806 32332068 - MGP_BALBcJ_P0071213 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071214.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329931 32331716 - MGP_BALBcJ_P0071214 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071215.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329938 32330498 - MGP_BALBcJ_P0071215 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0071216.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329962 32330376 - Mfsd10 protein_coding retained_intron MGP_BALBcJ_T0071217.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32329984 32332004 - MGP_BALBcJ_P0071217 Mfsd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071218.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32330260 32331397 - Mfsd10 protein_coding processed_transcript MGP_BALBcJ_T0071219.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32330487 32331410 - Mfsd10 protein_coding processed_transcript MGP_BALBcJ_T0071220.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32330903 32331935 - Mfsd10 protein_coding retained_intron MGP_BALBcJ_T0071221.1 MGP_BALBcJ_G0029445.1 mouse_genomes_project 5 32331468 32332019 - MGP_BALBcJ_P0071221 Mfsd10 protein_coding protein_coding MGP_BALBcJ_T0008055.1 MGP_BALBcJ_G0006570.1 mouse_genomes_project 5 27444025 27449329 - Gm42450 lincRNA lincRNA MGP_BALBcJ_T0070217.1 MGP_BALBcJ_G0029277.1 mouse_genomes_project 5 11852317 12138656 + MGP_BALBcJ_P0070217 Pclo protein_coding protein_coding MGP_BALBcJ_T0070218.1 MGP_BALBcJ_G0029277.1 mouse_genomes_project 5 11852317 12207695 + MGP_BALBcJ_P0070218 Pclo protein_coding protein_coding MGP_BALBcJ_T0070219.1 MGP_BALBcJ_G0029277.1 mouse_genomes_project 5 11852392 12203696 + Pclo protein_coding retained_intron MGP_BALBcJ_T0070220.1 MGP_BALBcJ_G0029277.1 mouse_genomes_project 5 12015652 12138667 + MGP_BALBcJ_P0070220 Pclo protein_coding protein_coding MGP_BALBcJ_T0004766.1 MGP_BALBcJ_G0004116.1 mouse_genomes_project 5 114517548 114520126 + Hnf1aos2 antisense antisense MGP_BALBcJ_T0004631.1 MGP_BALBcJ_G0004011.1 mouse_genomes_project 5 22188251 22196040 - Gm26648 antisense antisense MGP_BALBcJ_T0004803.1 MGP_BALBcJ_G0004141.1 mouse_genomes_project 5 123078389 123095322 - Gm15857 antisense antisense MGP_BALBcJ_T0073075.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562469 106629835 + MGP_BALBcJ_P0073075 Rpap2 protein_coding protein_coding MGP_BALBcJ_T0073076.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562490 106608103 + MGP_BALBcJ_P0073076 Rpap2 protein_coding protein_coding MGP_BALBcJ_T0073077.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562493 106566698 + Rpap2 protein_coding processed_transcript MGP_BALBcJ_T0073078.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562533 106629839 + MGP_BALBcJ_P0073078 Rpap2 protein_coding protein_coding MGP_BALBcJ_T0073079.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562546 106608103 + MGP_BALBcJ_P0073079 Rpap2 protein_coding protein_coding MGP_BALBcJ_T0073080.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562733 106566526 + MGP_BALBcJ_P0073080 Rpap2 protein_coding protein_coding MGP_BALBcJ_T0073081.1 MGP_BALBcJ_G0029819.1 mouse_genomes_project 5 106562754 106571699 + MGP_BALBcJ_P0073081 Rpap2 protein_coding protein_coding MGP_BALBcJ_T0008226.1 MGP_BALBcJ_G0006698.1 mouse_genomes_project 5 104353052 104358726 + Gm26519 lincRNA lincRNA MGP_BALBcJ_T0015055.1 MGP_BALBcJ_G0013152.1 mouse_genomes_project 5 96742303 96742919 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004637.1 MGP_BALBcJ_G0004016.1 mouse_genomes_project 5 28067915 28080567 + Gm42765 antisense antisense MGP_BALBcJ_T0004638.1 MGP_BALBcJ_G0004016.1 mouse_genomes_project 5 28067958 28082847 + Gm42765 antisense antisense MGP_BALBcJ_T0010722.1 MGP_BALBcJ_G0008847.1 mouse_genomes_project 5 145095764 145095849 - Mir7039 miRNA miRNA MGP_BALBcJ_T0069959.1 MGP_BALBcJ_G0029239.1 mouse_genomes_project 5 499923 512651 + MGP_BALBcJ_P0069959 1700109H08Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069960.1 MGP_BALBcJ_G0029239.1 mouse_genomes_project 5 500030 512666 + MGP_BALBcJ_P0069960 1700109H08Rik protein_coding protein_coding MGP_BALBcJ_T0069961.1 MGP_BALBcJ_G0029239.1 mouse_genomes_project 5 504037 512666 + MGP_BALBcJ_P0069961 1700109H08Rik protein_coding protein_coding MGP_BALBcJ_T0069962.1 MGP_BALBcJ_G0029239.1 mouse_genomes_project 5 506550 508767 + 1700109H08Rik protein_coding retained_intron MGP_BALBcJ_T0069963.1 MGP_BALBcJ_G0029239.1 mouse_genomes_project 5 508815 512654 + MGP_BALBcJ_P0069963 1700109H08Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073559.1 MGP_BALBcJ_G0029916.1 mouse_genomes_project 5 114074209 114119480 + MGP_BALBcJ_P0073559 Fam222a protein_coding protein_coding MGP_BALBcJ_T0073560.1 MGP_BALBcJ_G0029916.1 mouse_genomes_project 5 114074210 114100907 + Fam222a protein_coding processed_transcript MGP_BALBcJ_T0073686.1 MGP_BALBcJ_G0029942.1 mouse_genomes_project 5 114894824 114902767 - MGP_BALBcJ_P0073686 Gatc protein_coding protein_coding MGP_BALBcJ_T0001862.1 MGP_BALBcJ_G0001776.1 mouse_genomes_project 5 132249576 132252439 - TEC TEC MGP_BALBcJ_T0001694.1 MGP_BALBcJ_G0001609.1 mouse_genomes_project 5 72404438 72406051 - TEC TEC MGP_BALBcJ_T0014877.1 MGP_BALBcJ_G0012974.1 mouse_genomes_project 5 20340360 20340939 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008346.1 MGP_BALBcJ_G0006776.1 mouse_genomes_project 5 124999345 125034989 - Gm42637 lincRNA lincRNA MGP_BALBcJ_T0008019.1 MGP_BALBcJ_G0006546.1 mouse_genomes_project 5 9362099 9370649 + Gm29066 lincRNA lincRNA MGP_BALBcJ_T0075454.1 MGP_BALBcJ_G0030262.1 mouse_genomes_project 5 139246727 139283452 + MGP_BALBcJ_P0075454 Dnaaf5 protein_coding protein_coding MGP_BALBcJ_T0075455.1 MGP_BALBcJ_G0030262.1 mouse_genomes_project 5 139265078 139275809 + Dnaaf5 protein_coding processed_transcript MGP_BALBcJ_T0072398.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84985334 85017620 + MGP_BALBcJ_P0072398 Ythdc1 protein_coding protein_coding MGP_BALBcJ_T0072399.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84985346 85017625 + MGP_BALBcJ_P0072399 Ythdc1 protein_coding protein_coding MGP_BALBcJ_T0072400.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84985609 85017625 + MGP_BALBcJ_P0072400 Ythdc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072401.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84985677 85017627 + MGP_BALBcJ_P0072401 Ythdc1 protein_coding unknown_likely_coding MGP_BALBcJ_T0072402.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84985677 85017623 + MGP_BALBcJ_P0072402 Ythdc1 protein_coding protein_coding MGP_BALBcJ_T0072403.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84987518 84990890 + Ythdc1 protein_coding retained_intron MGP_BALBcJ_T0072404.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 84996624 85017625 + Ythdc1 protein_coding retained_intron MGP_BALBcJ_T0072405.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 85004149 85009298 + Ythdc1 protein_coding retained_intron MGP_BALBcJ_T0072406.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 85010282 85016698 + Ythdc1 protein_coding processed_transcript MGP_BALBcJ_T0072407.1 MGP_BALBcJ_G0029651.1 mouse_genomes_project 5 85012727 85017623 + Ythdc1 protein_coding retained_intron MGP_BALBcJ_T0008137.1 MGP_BALBcJ_G0006630.1 mouse_genomes_project 5 70409632 70410537 - AU023070 lincRNA lincRNA MGP_BALBcJ_T0008106.1 MGP_BALBcJ_G0006604.1 mouse_genomes_project 5 43582527 43588108 - 4930405L22Rik lincRNA lincRNA MGP_BALBcJ_T0072462.1 MGP_BALBcJ_G0029668.1 mouse_genomes_project 5 86068405 86084918 + MGP_BALBcJ_P0072462 Csn1s2b protein_coding protein_coding MGP_BALBcJ_T0072463.1 MGP_BALBcJ_G0029668.1 mouse_genomes_project 5 86068446 86084909 + MGP_BALBcJ_P0072463 Csn1s2b protein_coding protein_coding MGP_BALBcJ_T0072464.1 MGP_BALBcJ_G0029668.1 mouse_genomes_project 5 86068447 86078716 + MGP_BALBcJ_P0072464 Csn1s2b protein_coding protein_coding MGP_BALBcJ_T0072465.1 MGP_BALBcJ_G0029668.1 mouse_genomes_project 5 86068450 86084813 + MGP_BALBcJ_P0072465 Csn1s2b protein_coding protein_coding MGP_BALBcJ_T0072466.1 MGP_BALBcJ_G0029668.1 mouse_genomes_project 5 86071659 86073722 + Csn1s2b protein_coding retained_intron MGP_BALBcJ_T0001799.1 MGP_BALBcJ_G0001714.1 mouse_genomes_project 5 121460761 121463861 + TEC TEC MGP_BALBcJ_T0071580.1 MGP_BALBcJ_G0029509.1 mouse_genomes_project 5 43094897 43105264 + MGP_BALBcJ_P0071580 Clrn2 protein_coding protein_coding MGP_BALBcJ_T0070400.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21403173 21411812 - Fam126a protein_coding processed_transcript MGP_BALBcJ_T0070401.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21403174 21518726 - MGP_BALBcJ_P0070401 Fam126a protein_coding protein_coding MGP_BALBcJ_T0070402.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21448607 21519122 - MGP_BALBcJ_P0070402 Fam126a protein_coding protein_coding MGP_BALBcJ_T0070403.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21452153 21519080 - MGP_BALBcJ_P0070403 Fam126a protein_coding protein_coding MGP_BALBcJ_T0070404.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21452155 21488039 - MGP_BALBcJ_P0070404 Fam126a protein_coding protein_coding MGP_BALBcJ_T0070405.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21469941 21473258 - Fam126a protein_coding retained_intron MGP_BALBcJ_T0070406.1 MGP_BALBcJ_G0029311.1 mouse_genomes_project 5 21477085 21518719 - Fam126a protein_coding processed_transcript MGP_BALBcJ_T0008036.1 MGP_BALBcJ_G0006558.1 mouse_genomes_project 5 20857453 20893535 - 5031425E22Rik lincRNA lincRNA MGP_BALBcJ_T0008037.1 MGP_BALBcJ_G0006558.1 mouse_genomes_project 5 20892011 20894118 - 5031425E22Rik lincRNA lincRNA MGP_BALBcJ_T0008038.1 MGP_BALBcJ_G0006558.1 mouse_genomes_project 5 20892488 20894468 - 5031425E22Rik lincRNA lincRNA MGP_BALBcJ_T0075727.1 MGP_BALBcJ_G0030321.1 mouse_genomes_project 5 143823093 143828023 + Cyth3 protein_coding retained_intron MGP_BALBcJ_T0075728.1 MGP_BALBcJ_G0030321.1 mouse_genomes_project 5 143823232 143910385 + MGP_BALBcJ_P0075728 Cyth3 protein_coding protein_coding MGP_BALBcJ_T0075729.1 MGP_BALBcJ_G0030321.1 mouse_genomes_project 5 143834659 143892790 + MGP_BALBcJ_P0075729 Cyth3 protein_coding protein_coding MGP_BALBcJ_T0075730.1 MGP_BALBcJ_G0030321.1 mouse_genomes_project 5 143836944 143892692 + MGP_BALBcJ_P0075730 Cyth3 protein_coding protein_coding MGP_BALBcJ_T0099950.1 MGP_BALBcJ_G0037986.1 mouse_genomes_project 5 95561616 95561811 + Gm24623 snRNA snRNA MGP_BALBcJ_T0071415.1 MGP_BALBcJ_G0029480.1 mouse_genomes_project 5 35406884 35411113 + MGP_BALBcJ_P0071415 Cytl1 protein_coding protein_coding MGP_BALBcJ_T0071416.1 MGP_BALBcJ_G0029480.1 mouse_genomes_project 5 35408611 35411108 + Cytl1 protein_coding retained_intron MGP_BALBcJ_T0015117.1 MGP_BALBcJ_G0013214.1 mouse_genomes_project 5 116232546 116233203 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070200.1 MGP_BALBcJ_G0029274.1 mouse_genomes_project 5 9652328 9853864 + MGP_BALBcJ_P0070200 Sema3d protein_coding protein_coding MGP_BALBcJ_T0070201.1 MGP_BALBcJ_G0029274.1 mouse_genomes_project 5 9652449 9824932 + Sema3d protein_coding processed_transcript MGP_BALBcJ_T0070202.1 MGP_BALBcJ_G0029274.1 mouse_genomes_project 5 9652449 9844018 + MGP_BALBcJ_P0070202 Sema3d protein_coding protein_coding MGP_BALBcJ_T0070203.1 MGP_BALBcJ_G0029274.1 mouse_genomes_project 5 9760449 9783622 + Sema3d protein_coding processed_transcript MGP_BALBcJ_T0070204.1 MGP_BALBcJ_G0029274.1 mouse_genomes_project 5 9840985 9853668 + Sema3d protein_coding processed_transcript MGP_BALBcJ_T0008426.1 MGP_BALBcJ_G0006833.1 mouse_genomes_project 5 149172615 149173915 + 2210417A02Rik lincRNA lincRNA MGP_BALBcJ_T0001835.1 MGP_BALBcJ_G0001749.1 mouse_genomes_project 5 129394992 129397216 + TEC TEC MGP_BALBcJ_T0001850.1 MGP_BALBcJ_G0001764.1 mouse_genomes_project 5 131517417 131518550 - TEC TEC MGP_BALBcJ_T0073396.1 MGP_BALBcJ_G0029885.1 mouse_genomes_project 5 111883917 112046313 - MGP_BALBcJ_P0073396 Sez6l protein_coding protein_coding MGP_BALBcJ_T0073397.1 MGP_BALBcJ_G0029885.1 mouse_genomes_project 5 111883922 112046420 - MGP_BALBcJ_P0073397 Sez6l protein_coding protein_coding MGP_BALBcJ_T0073398.1 MGP_BALBcJ_G0029885.1 mouse_genomes_project 5 111883931 112046630 - MGP_BALBcJ_P0073398 Sez6l protein_coding protein_coding MGP_BALBcJ_T0073399.1 MGP_BALBcJ_G0029885.1 mouse_genomes_project 5 111886584 112046622 - MGP_BALBcJ_P0073399 Sez6l protein_coding protein_coding MGP_BALBcJ_T0008384.1 MGP_BALBcJ_G0006797.1 mouse_genomes_project 5 132362048 132363207 + Gm28616 lincRNA lincRNA MGP_BALBcJ_T0072381.1 MGP_BALBcJ_G0029643.1 mouse_genomes_project 5 84360708 84377846 - MGP_BALBcJ_P0072381 Gnrhr protein_coding protein_coding MGP_BALBcJ_T0072382.1 MGP_BALBcJ_G0029643.1 mouse_genomes_project 5 84361949 84377815 - MGP_BALBcJ_P0072382 Gnrhr protein_coding protein_coding MGP_BALBcJ_T0072383.1 MGP_BALBcJ_G0029643.1 mouse_genomes_project 5 84364497 84377791 - MGP_BALBcJ_P0072383 Gnrhr protein_coding protein_coding MGP_BALBcJ_T0001892.1 MGP_BALBcJ_G0001805.1 mouse_genomes_project 5 143593126 143595868 + TEC TEC MGP_BALBcJ_T0071059.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31316593 31335222 - MGP_BALBcJ_P0071059 Slbp protein_coding protein_coding MGP_BALBcJ_T0071060.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31321697 31335451 - MGP_BALBcJ_P0071060 Slbp protein_coding protein_coding MGP_BALBcJ_T0071061.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31321697 31335183 - MGP_BALBcJ_P0071061 Slbp protein_coding protein_coding MGP_BALBcJ_T0071062.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31322028 31323974 - Slbp protein_coding retained_intron MGP_BALBcJ_T0071063.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31323752 31335215 - Slbp protein_coding retained_intron MGP_BALBcJ_T0071064.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31325017 31335177 - MGP_BALBcJ_P0071064 Slbp protein_coding protein_coding MGP_BALBcJ_T0071065.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31327196 31335173 - MGP_BALBcJ_P0071065 Slbp protein_coding protein_coding MGP_BALBcJ_T0071066.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31328883 31335230 - Slbp protein_coding retained_intron MGP_BALBcJ_T0071067.1 MGP_BALBcJ_G0029426.1 mouse_genomes_project 5 31334501 31335178 - Slbp protein_coding retained_intron MGP_BALBcJ_T0102573.1 MGP_BALBcJ_G0040389.1 mouse_genomes_project 5 85616498 85618158 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0075146.1 MGP_BALBcJ_G0030194.1 mouse_genomes_project 5 136993844 137005750 - MGP_BALBcJ_P0075146 Serpine1 protein_coding protein_coding MGP_BALBcJ_T0075147.1 MGP_BALBcJ_G0030194.1 mouse_genomes_project 5 136993852 137005745 - MGP_BALBcJ_P0075147 Serpine1 protein_coding protein_coding MGP_BALBcJ_T0075148.1 MGP_BALBcJ_G0030194.1 mouse_genomes_project 5 137003800 137005759 - Serpine1 protein_coding retained_intron MGP_BALBcJ_T0004711.1 MGP_BALBcJ_G0004076.1 mouse_genomes_project 5 86100626 86104085 - Gm42794 antisense antisense MGP_BALBcJ_T0099981.1 MGP_BALBcJ_G0038017.1 mouse_genomes_project 5 151043139 151043280 - Gm25284 snRNA snRNA MGP_BALBcJ_T0071679.1 MGP_BALBcJ_G0029525.1 mouse_genomes_project 5 50402226 50433815 + MGP_BALBcJ_P0071679 Pi4k2b protein_coding protein_coding MGP_BALBcJ_T0071680.1 MGP_BALBcJ_G0029525.1 mouse_genomes_project 5 50402258 50412182 + MGP_BALBcJ_P0071680 Pi4k2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071681.1 MGP_BALBcJ_G0029525.1 mouse_genomes_project 5 50402262 50433815 + MGP_BALBcJ_P0071681 Pi4k2b protein_coding protein_coding MGP_BALBcJ_T0071682.1 MGP_BALBcJ_G0029525.1 mouse_genomes_project 5 50415273 50418154 + Pi4k2b protein_coding retained_intron MGP_BALBcJ_T0015186.1 MGP_BALBcJ_G0013283.1 mouse_genomes_project 5 147793748 147794208 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070266.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18131738 18251285 - MGP_BALBcJ_P0070266 Phtf2 protein_coding protein_coding MGP_BALBcJ_T0070267.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18132738 18150775 - MGP_BALBcJ_P0070267 Phtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070268.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18159051 18224459 - Phtf2 protein_coding processed_transcript MGP_BALBcJ_T0070269.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18159054 18182196 - MGP_BALBcJ_P0070269 Phtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070270.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18165233 18251238 - Phtf2 protein_coding retained_intron MGP_BALBcJ_T0070271.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18169788 18251239 - Phtf2 protein_coding retained_intron MGP_BALBcJ_T0070272.1 MGP_BALBcJ_G0029287.1 mouse_genomes_project 5 18182172 18251206 - MGP_BALBcJ_P0070272 Phtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074588.1 MGP_BALBcJ_G0030097.1 mouse_genomes_project 5 128504842 128549372 + MGP_BALBcJ_P0074588 Piwil1 protein_coding protein_coding MGP_BALBcJ_T0074589.1 MGP_BALBcJ_G0030097.1 mouse_genomes_project 5 128537588 128557509 + MGP_BALBcJ_P0074589 Piwil1 protein_coding protein_coding MGP_BALBcJ_T0074590.1 MGP_BALBcJ_G0030097.1 mouse_genomes_project 5 128538904 128556628 + MGP_BALBcJ_P0074590 Piwil1 protein_coding protein_coding MGP_BALBcJ_T0001806.1 MGP_BALBcJ_G0001721.1 mouse_genomes_project 5 122253481 122258162 + TEC TEC MGP_BALBcJ_T0001695.1 MGP_BALBcJ_G0001610.1 mouse_genomes_project 5 72544587 72545917 + TEC TEC MGP_BALBcJ_T0072577.1 MGP_BALBcJ_G0029707.1 mouse_genomes_project 5 89257868 89259743 + MGP_BALBcJ_P0072577 Cxcl1 protein_coding protein_coding MGP_BALBcJ_T0072578.1 MGP_BALBcJ_G0029707.1 mouse_genomes_project 5 89257870 89259741 + Cxcl1 protein_coding retained_intron MGP_BALBcJ_T0071046.1 MGP_BALBcJ_G0029422.1 mouse_genomes_project 5 31053111 31086139 + Uvssa protein_coding retained_intron MGP_BALBcJ_T0071047.1 MGP_BALBcJ_G0029422.1 mouse_genomes_project 5 31053258 31095369 + MGP_BALBcJ_P0071047 Uvssa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071048.1 MGP_BALBcJ_G0029422.1 mouse_genomes_project 5 31053258 31095369 + MGP_BALBcJ_P0071048 Uvssa protein_coding protein_coding MGP_BALBcJ_T0071049.1 MGP_BALBcJ_G0029422.1 mouse_genomes_project 5 31053334 31095369 + MGP_BALBcJ_P0071049 Uvssa protein_coding protein_coding MGP_BALBcJ_T0018170.1 MGP_BALBcJ_G0015556.1 mouse_genomes_project 5 149439135 149459597 - Gm15411 processed_transcript lincRNA MGP_BALBcJ_T0018171.1 MGP_BALBcJ_G0015556.1 mouse_genomes_project 5 149442167 149459568 - Gm15411 processed_transcript lincRNA MGP_BALBcJ_T0018172.1 MGP_BALBcJ_G0015556.1 mouse_genomes_project 5 149457580 149459597 - Gm15411 processed_transcript retained_intron MGP_BALBcJ_T0008349.1 MGP_BALBcJ_G0006779.1 mouse_genomes_project 5 125731855 125735810 - Gm42945 lincRNA lincRNA MGP_BALBcJ_T0008350.1 MGP_BALBcJ_G0006779.1 mouse_genomes_project 5 125731869 125739294 - Gm42945 lincRNA lincRNA MGP_BALBcJ_T0004789.1 MGP_BALBcJ_G0004128.1 mouse_genomes_project 5 120075812 120091392 - Gm27199 antisense antisense MGP_BALBcJ_T0015041.1 MGP_BALBcJ_G0013138.1 mouse_genomes_project 5 87212609 87213999 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102566.1 MGP_BALBcJ_G0040382.1 mouse_genomes_project 5 85045019 85047869 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011585.1 MGP_BALBcJ_G0009710.1 mouse_genomes_project 5 110791885 110792045 - Gm27680 misc_RNA misc_RNA MGP_BALBcJ_T0008270.1 MGP_BALBcJ_G0006726.1 mouse_genomes_project 5 111411028 111416165 - Gm42488 lincRNA lincRNA MGP_BALBcJ_T0008452.1 MGP_BALBcJ_G0006850.1 mouse_genomes_project 5 150347664 150350327 - Gm43450 lincRNA lincRNA MGP_BALBcJ_T0008299.1 MGP_BALBcJ_G0006743.1 mouse_genomes_project 5 115610029 115612427 - Gm13842 lincRNA lincRNA MGP_BALBcJ_T0008300.1 MGP_BALBcJ_G0006743.1 mouse_genomes_project 5 115610464 115612821 - Gm13842 lincRNA lincRNA MGP_BALBcJ_T0072388.1 MGP_BALBcJ_G0029646.1 mouse_genomes_project 5 84589316 84643848 - MGP_BALBcJ_P0072388 Tmprss11a protein_coding protein_coding MGP_BALBcJ_T0072389.1 MGP_BALBcJ_G0029646.1 mouse_genomes_project 5 84595729 84598787 - Tmprss11a protein_coding retained_intron MGP_BALBcJ_T0075384.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138323135 138327474 - MGP_BALBcJ_P0075384 BC037034 protein_coding protein_coding MGP_BALBcJ_T0075385.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138323137 138326820 - MGP_BALBcJ_P0075385 BC037034 protein_coding protein_coding MGP_BALBcJ_T0075386.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138323138 138327470 - MGP_BALBcJ_P0075386 BC037034 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075387.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138323139 138327513 - BC037034 protein_coding retained_intron MGP_BALBcJ_T0075388.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138323584 138324425 - MGP_BALBcJ_P0075388 BC037034 protein_coding protein_coding MGP_BALBcJ_T0075389.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138325049 138325674 - BC037034 protein_coding retained_intron MGP_BALBcJ_T0075390.1 MGP_BALBcJ_G0030246.1 mouse_genomes_project 5 138325732 138326618 - BC037034 protein_coding retained_intron MGP_BALBcJ_T0015110.1 MGP_BALBcJ_G0013207.1 mouse_genomes_project 5 114346326 114346969 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001490.1 MGP_BALBcJ_G0001409.1 mouse_genomes_project 5 29185221 29185852 + TEC TEC MGP_BALBcJ_T0011587.1 MGP_BALBcJ_G0009712.1 mouse_genomes_project 5 111678205 111678279 - Gm27882 misc_RNA misc_RNA MGP_BALBcJ_T0102557.1 MGP_BALBcJ_G0040373.1 mouse_genomes_project 5 24391 25718 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0073195.1 MGP_BALBcJ_G0029840.1 mouse_genomes_project 5 107702263 107713702 + MGP_BALBcJ_P0073195 Fgfrl1 protein_coding protein_coding MGP_BALBcJ_T0073196.1 MGP_BALBcJ_G0029840.1 mouse_genomes_project 5 107704407 107713505 + MGP_BALBcJ_P0073196 Fgfrl1 protein_coding protein_coding MGP_BALBcJ_T0073197.1 MGP_BALBcJ_G0029840.1 mouse_genomes_project 5 107704445 107717090 + MGP_BALBcJ_P0073197 Fgfrl1 protein_coding protein_coding MGP_BALBcJ_T0073198.1 MGP_BALBcJ_G0029840.1 mouse_genomes_project 5 107704679 107717062 + MGP_BALBcJ_P0073198 Fgfrl1 protein_coding protein_coding MGP_BALBcJ_T0073199.1 MGP_BALBcJ_G0029840.1 mouse_genomes_project 5 107715239 107716038 + Fgfrl1 protein_coding retained_intron MGP_BALBcJ_T0004611.1 MGP_BALBcJ_G0003994.1 mouse_genomes_project 5 513421 514684 + 2510017J16Rik antisense antisense MGP_BALBcJ_T0018096.1 MGP_BALBcJ_G0015532.1 mouse_genomes_project 5 29201067 29305980 + Gm43809 processed_transcript processed_transcript MGP_BALBcJ_T0018097.1 MGP_BALBcJ_G0015532.1 mouse_genomes_project 5 29217917 29305960 + Gm43809 processed_transcript processed_transcript MGP_BALBcJ_T0015040.1 MGP_BALBcJ_G0013137.1 mouse_genomes_project 5 87178404 87180034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075280.1 MGP_BALBcJ_G0030219.1 mouse_genomes_project 5 137679640 137700214 - MGP_BALBcJ_P0075280 Nyap1 protein_coding protein_coding MGP_BALBcJ_T0075281.1 MGP_BALBcJ_G0030219.1 mouse_genomes_project 5 137680616 137699934 - MGP_BALBcJ_P0075281 Nyap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0075282.1 MGP_BALBcJ_G0030219.1 mouse_genomes_project 5 137680654 137701823 - MGP_BALBcJ_P0075282 Nyap1 protein_coding protein_coding MGP_BALBcJ_T0075283.1 MGP_BALBcJ_G0030219.1 mouse_genomes_project 5 137688255 137701318 - MGP_BALBcJ_P0075283 Nyap1 protein_coding protein_coding MGP_BALBcJ_T0001632.1 MGP_BALBcJ_G0001548.1 mouse_genomes_project 5 63444067 63448260 - TEC TEC MGP_BALBcJ_T0001803.1 MGP_BALBcJ_G0001718.1 mouse_genomes_project 5 122138860 122139164 + TEC TEC MGP_BALBcJ_T0075151.1 MGP_BALBcJ_G0030196.1 mouse_genomes_project 5 137070168 137084514 - MGP_BALBcJ_P0075151 Muc3 protein_coding protein_coding MGP_BALBcJ_T0075152.1 MGP_BALBcJ_G0030196.1 mouse_genomes_project 5 137070207 137074374 - Muc3 protein_coding processed_transcript MGP_BALBcJ_T0074067.1 MGP_BALBcJ_G0030015.1 mouse_genomes_project 5 121600415 121606064 + MGP_BALBcJ_P0074067 Fam109a protein_coding protein_coding MGP_BALBcJ_T0074068.1 MGP_BALBcJ_G0030015.1 mouse_genomes_project 5 121600426 121606031 + MGP_BALBcJ_P0074068 Fam109a protein_coding protein_coding MGP_BALBcJ_T0074069.1 MGP_BALBcJ_G0030015.1 mouse_genomes_project 5 121600436 121604316 + MGP_BALBcJ_P0074069 Fam109a protein_coding protein_coding MGP_BALBcJ_T0014837.1 MGP_BALBcJ_G0012934.1 mouse_genomes_project 5 7613336 7614364 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008390.1 MGP_BALBcJ_G0006803.1 mouse_genomes_project 5 136849499 136868494 + 4933404O12Rik lincRNA lincRNA MGP_BALBcJ_T0008391.1 MGP_BALBcJ_G0006803.1 mouse_genomes_project 5 136849534 136865142 + 4933404O12Rik lincRNA lincRNA MGP_BALBcJ_T0008392.1 MGP_BALBcJ_G0006803.1 mouse_genomes_project 5 136849705 136865061 + 4933404O12Rik lincRNA lincRNA MGP_BALBcJ_T0008393.1 MGP_BALBcJ_G0006803.1 mouse_genomes_project 5 136849754 136868500 + 4933404O12Rik lincRNA lincRNA MGP_BALBcJ_T0018149.1 MGP_BALBcJ_G0015552.1 mouse_genomes_project 5 124412740 124443610 + Tctn2 processed_transcript processed_transcript MGP_BALBcJ_T0018150.1 MGP_BALBcJ_G0015552.1 mouse_genomes_project 5 124412740 124416122 + Tctn2 processed_transcript retained_intron MGP_BALBcJ_T0018151.1 MGP_BALBcJ_G0015552.1 mouse_genomes_project 5 124412775 124419715 + Tctn2 processed_transcript retained_intron MGP_BALBcJ_T0018152.1 MGP_BALBcJ_G0015552.1 mouse_genomes_project 5 124412778 124417370 + Tctn2 processed_transcript retained_intron MGP_BALBcJ_T0018153.1 MGP_BALBcJ_G0015552.1 mouse_genomes_project 5 124412783 124434426 + Tctn2 processed_transcript retained_intron MGP_BALBcJ_T0018154.1 MGP_BALBcJ_G0015552.1 mouse_genomes_project 5 124412788 124443330 + Tctn2 processed_transcript processed_transcript MGP_BALBcJ_T0010680.1 MGP_BALBcJ_G0008805.1 mouse_genomes_project 5 99225846 99225922 - Gm23222 miRNA miRNA MGP_BALBcJ_T0072441.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936510 85943513 - MGP_BALBcJ_P0072441 Csn2 protein_coding protein_coding MGP_BALBcJ_T0072442.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936511 85943292 - Csn2 protein_coding retained_intron MGP_BALBcJ_T0072443.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936514 85940539 - Csn2 protein_coding retained_intron MGP_BALBcJ_T0072444.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936514 85943308 - MGP_BALBcJ_P0072444 Csn2 protein_coding protein_coding MGP_BALBcJ_T0072445.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936691 85943292 - MGP_BALBcJ_P0072445 Csn2 protein_coding protein_coding MGP_BALBcJ_T0072446.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936755 85943304 - MGP_BALBcJ_P0072446 Csn2 protein_coding protein_coding MGP_BALBcJ_T0072447.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85936815 85943304 - MGP_BALBcJ_P0072447 Csn2 protein_coding protein_coding MGP_BALBcJ_T0072448.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85937722 85941975 - MGP_BALBcJ_P0072448 Csn2 protein_coding protein_coding MGP_BALBcJ_T0072449.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85938446 85940414 - Csn2 protein_coding processed_transcript MGP_BALBcJ_T0072450.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85941691 85943304 - Csn2 protein_coding retained_intron MGP_BALBcJ_T0072451.1 MGP_BALBcJ_G0029666.1 mouse_genomes_project 5 85941775 85943304 - Csn2 protein_coding retained_intron MGP_BALBcJ_T0072920.1 MGP_BALBcJ_G0029779.1 mouse_genomes_project 5 102438389 102569072 + Aff1 protein_coding retained_intron MGP_BALBcJ_T0072921.1 MGP_BALBcJ_G0029779.1 mouse_genomes_project 5 102505500 102608359 + MGP_BALBcJ_P0072921 Aff1 protein_coding protein_coding MGP_BALBcJ_T0072922.1 MGP_BALBcJ_G0029779.1 mouse_genomes_project 5 102505919 102595237 + MGP_BALBcJ_P0072922 Aff1 protein_coding protein_coding MGP_BALBcJ_T0072923.1 MGP_BALBcJ_G0029779.1 mouse_genomes_project 5 102505928 102608359 + MGP_BALBcJ_P0072923 Aff1 protein_coding protein_coding MGP_BALBcJ_T0072924.1 MGP_BALBcJ_G0029779.1 mouse_genomes_project 5 102536517 102564239 + Aff1 protein_coding retained_intron MGP_BALBcJ_T0071444.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896076 35906317 + MGP_BALBcJ_P0071444 Lyar protein_coding protein_coding MGP_BALBcJ_T0071445.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896114 35903529 + MGP_BALBcJ_P0071445 Lyar protein_coding protein_coding MGP_BALBcJ_T0071446.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896121 35906318 + MGP_BALBcJ_P0071446 Lyar protein_coding protein_coding MGP_BALBcJ_T0071447.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896123 35906602 + MGP_BALBcJ_P0071447 Lyar protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071448.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896125 35909919 + MGP_BALBcJ_P0071448 Lyar protein_coding protein_coding MGP_BALBcJ_T0071449.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896144 35901527 + MGP_BALBcJ_P0071449 Lyar protein_coding protein_coding MGP_BALBcJ_T0071450.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35896148 35903713 + MGP_BALBcJ_P0071450 Lyar protein_coding protein_coding MGP_BALBcJ_T0071451.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35898577 35906297 + MGP_BALBcJ_P0071451 Lyar protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071452.1 MGP_BALBcJ_G0029485.1 mouse_genomes_project 5 35900261 35902074 + Lyar protein_coding retained_intron MGP_BALBcJ_T0001697.1 MGP_BALBcJ_G0001612.1 mouse_genomes_project 5 73122100 73122550 - TEC TEC MGP_BALBcJ_T0073454.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113231065 113261827 - MGP_BALBcJ_P0073454 Sart3 protein_coding protein_coding MGP_BALBcJ_T0073455.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113231067 113261016 - MGP_BALBcJ_P0073455 Sart3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073456.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113233297 113234215 - Sart3 protein_coding retained_intron MGP_BALBcJ_T0073457.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113234389 113244062 - Sart3 protein_coding processed_transcript MGP_BALBcJ_T0073458.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113242853 113243377 - Sart3 protein_coding processed_transcript MGP_BALBcJ_T0073459.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113243599 113246834 - Sart3 protein_coding retained_intron MGP_BALBcJ_T0073460.1 MGP_BALBcJ_G0029898.1 mouse_genomes_project 5 113244026 113249857 - Sart3 protein_coding processed_transcript MGP_BALBcJ_T0001760.1 MGP_BALBcJ_G0001675.1 mouse_genomes_project 5 112602091 112603975 - TEC TEC MGP_BALBcJ_T0102572.1 MGP_BALBcJ_G0040388.1 mouse_genomes_project 5 85596194 85599961 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0074873.1 MGP_BALBcJ_G0030142.1 mouse_genomes_project 5 134779045 134784312 - MGP_BALBcJ_P0074873 Wbscr28 protein_coding protein_coding MGP_BALBcJ_T0074874.1 MGP_BALBcJ_G0030142.1 mouse_genomes_project 5 134779046 134784312 - MGP_BALBcJ_P0074874 Wbscr28 protein_coding protein_coding MGP_BALBcJ_T0071662.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49789175 49829336 - MGP_BALBcJ_P0071662 Dhx15 protein_coding protein_coding MGP_BALBcJ_T0071663.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49789664 49829199 - MGP_BALBcJ_P0071663 Dhx15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071664.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49792295 49796774 - Dhx15 protein_coding retained_intron MGP_BALBcJ_T0071665.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49792697 49829311 - MGP_BALBcJ_P0071665 Dhx15 protein_coding protein_coding MGP_BALBcJ_T0071666.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49797635 49800605 - Dhx15 protein_coding retained_intron MGP_BALBcJ_T0071667.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49805723 49829316 - MGP_BALBcJ_P0071667 Dhx15 protein_coding protein_coding MGP_BALBcJ_T0071668.1 MGP_BALBcJ_G0029520.1 mouse_genomes_project 5 49823635 49826235 - Dhx15 protein_coding retained_intron MGP_BALBcJ_T0014977.1 MGP_BALBcJ_G0013074.1 mouse_genomes_project 5 59862867 59863483 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070098.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5066946 5090771 + MGP_BALBcJ_P0070098 Sri protein_coding protein_coding MGP_BALBcJ_T0070099.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5077395 5090543 + MGP_BALBcJ_P0070099 Sri protein_coding protein_coding MGP_BALBcJ_T0070100.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5077426 5078724 + Sri protein_coding retained_intron MGP_BALBcJ_T0070101.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5077430 5080590 + Sri protein_coding retained_intron MGP_BALBcJ_T0070102.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5077476 5086027 + Sri protein_coding retained_intron MGP_BALBcJ_T0070103.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5080210 5089150 + Sri protein_coding retained_intron MGP_BALBcJ_T0070104.1 MGP_BALBcJ_G0029261.1 mouse_genomes_project 5 5082696 5083902 + Sri protein_coding retained_intron MGP_BALBcJ_T0015031.1 MGP_BALBcJ_G0013128.1 mouse_genomes_project 5 85589840 85590521 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099938.1 MGP_BALBcJ_G0037974.1 mouse_genomes_project 5 79003864 79003967 + Gm22974 snRNA snRNA MGP_BALBcJ_T0101723.1 MGP_BALBcJ_G0039698.1 mouse_genomes_project 5 75534601 75534988 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101724.1 MGP_BALBcJ_G0039698.1 mouse_genomes_project 5 75534617 75535172 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0074937.1 MGP_BALBcJ_G0030155.1 mouse_genomes_project 5 135072620 135132768 + MGP_BALBcJ_P0074937 Baz1b protein_coding protein_coding MGP_BALBcJ_T0074938.1 MGP_BALBcJ_G0030155.1 mouse_genomes_project 5 135083532 135086550 + Baz1b protein_coding retained_intron MGP_BALBcJ_T0074939.1 MGP_BALBcJ_G0030155.1 mouse_genomes_project 5 135091346 135097540 + Baz1b protein_coding retained_intron MGP_BALBcJ_T0074940.1 MGP_BALBcJ_G0030155.1 mouse_genomes_project 5 135094087 135103737 + Baz1b protein_coding retained_intron MGP_BALBcJ_T0074941.1 MGP_BALBcJ_G0030155.1 mouse_genomes_project 5 135129039 135130821 + Baz1b protein_coding retained_intron MGP_BALBcJ_T0099954.1 MGP_BALBcJ_G0037990.1 mouse_genomes_project 5 102650520 102650627 + Gm24897 snRNA snRNA MGP_BALBcJ_T0001456.1 MGP_BALBcJ_G0001377.1 mouse_genomes_project 5 11940287 11942875 + TEC TEC MGP_BALBcJ_T0070296.1 MGP_BALBcJ_G0029292.1 mouse_genomes_project 5 18671955 18799344 - MGP_BALBcJ_P0070296 Ccdc146 protein_coding protein_coding MGP_BALBcJ_T0070297.1 MGP_BALBcJ_G0029292.1 mouse_genomes_project 5 18699050 18799344 - MGP_BALBcJ_P0070297 Ccdc146 protein_coding protein_coding MGP_BALBcJ_T0070298.1 MGP_BALBcJ_G0029292.1 mouse_genomes_project 5 18699333 18714095 - Ccdc146 protein_coding retained_intron MGP_BALBcJ_T0070299.1 MGP_BALBcJ_G0029292.1 mouse_genomes_project 5 18702191 18705799 - Ccdc146 protein_coding retained_intron MGP_BALBcJ_T0070300.1 MGP_BALBcJ_G0029292.1 mouse_genomes_project 5 18705852 18714309 - Ccdc146 protein_coding processed_transcript MGP_BALBcJ_T0073142.1 MGP_BALBcJ_G0029831.1 mouse_genomes_project 5 107437633 107438838 - MGP_BALBcJ_P0073142 Atp5k protein_coding protein_coding MGP_BALBcJ_T0073143.1 MGP_BALBcJ_G0029831.1 mouse_genomes_project 5 107437633 107438838 - MGP_BALBcJ_P0073143 Atp5k protein_coding protein_coding MGP_BALBcJ_T0073144.1 MGP_BALBcJ_G0029831.1 mouse_genomes_project 5 107437635 107438787 - Atp5k protein_coding retained_intron MGP_BALBcJ_T0001881.1 MGP_BALBcJ_G0001794.1 mouse_genomes_project 5 136452808 136459747 - TEC TEC MGP_BALBcJ_T0072130.1 MGP_BALBcJ_G0029601.1 mouse_genomes_project 5 71289940 71306377 - MGP_BALBcJ_P0072130 Ociad2 protein_coding protein_coding MGP_BALBcJ_T0072131.1 MGP_BALBcJ_G0029601.1 mouse_genomes_project 5 71289942 71306496 - MGP_BALBcJ_P0072131 Ociad2 protein_coding protein_coding MGP_BALBcJ_T0072132.1 MGP_BALBcJ_G0029601.1 mouse_genomes_project 5 71289942 71306493 - MGP_BALBcJ_P0072132 Ociad2 protein_coding protein_coding MGP_BALBcJ_T0072133.1 MGP_BALBcJ_G0029601.1 mouse_genomes_project 5 71291077 71306076 - MGP_BALBcJ_P0072133 Ociad2 protein_coding protein_coding MGP_BALBcJ_T0072134.1 MGP_BALBcJ_G0029601.1 mouse_genomes_project 5 71295386 71308556 - MGP_BALBcJ_P0072134 Ociad2 protein_coding protein_coding MGP_BALBcJ_T0008217.1 MGP_BALBcJ_G0006693.1 mouse_genomes_project 5 101959118 102035186 - 4930429D17Rik lincRNA lincRNA MGP_BALBcJ_T0008155.1 MGP_BALBcJ_G0006644.1 mouse_genomes_project 5 73813082 73815689 - Gm19590 lincRNA lincRNA MGP_BALBcJ_T0008125.1 MGP_BALBcJ_G0006622.1 mouse_genomes_project 5 62316853 62357378 + Gm31363 lincRNA lincRNA MGP_BALBcJ_T0073849.1 MGP_BALBcJ_G0029969.1 mouse_genomes_project 5 117782650 117804590 + Hrk protein_coding processed_transcript MGP_BALBcJ_T0073850.1 MGP_BALBcJ_G0029969.1 mouse_genomes_project 5 117788270 117809236 + MGP_BALBcJ_P0073850 Hrk protein_coding protein_coding MGP_BALBcJ_T0001815.1 MGP_BALBcJ_G0001730.1 mouse_genomes_project 5 123468762 123470101 - TEC TEC MGP_BALBcJ_T0010677.1 MGP_BALBcJ_G0008802.1 mouse_genomes_project 5 90812993 90813093 + Mir6415 miRNA miRNA MGP_BALBcJ_T0014900.1 MGP_BALBcJ_G0012997.1 mouse_genomes_project 5 27242670 27242962 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008198.1 MGP_BALBcJ_G0006680.1 mouse_genomes_project 5 97962096 97967293 + Gm43252 lincRNA lincRNA MGP_BALBcJ_T0008089.1 MGP_BALBcJ_G0006591.1 mouse_genomes_project 5 37111629 37249830 - 4930513D17Rik lincRNA lincRNA MGP_BALBcJ_T0008090.1 MGP_BALBcJ_G0006591.1 mouse_genomes_project 5 37112445 37249873 - 4930513D17Rik lincRNA lincRNA MGP_BALBcJ_T0008091.1 MGP_BALBcJ_G0006591.1 mouse_genomes_project 5 37128128 37249828 - 4930513D17Rik lincRNA lincRNA MGP_BALBcJ_T0073211.1 MGP_BALBcJ_G0029849.1 mouse_genomes_project 5 108476639 108492791 - MGP_BALBcJ_P0073211 protein_coding protein_coding MGP_BALBcJ_T0008059.1 MGP_BALBcJ_G0006573.1 mouse_genomes_project 5 29165047 29173299 - Gm43660 lincRNA lincRNA MGP_BALBcJ_T0074563.1 MGP_BALBcJ_G0030091.1 mouse_genomes_project 5 125300384 125394173 + MGP_BALBcJ_P0074563 Tmem132b protein_coding protein_coding MGP_BALBcJ_T0074564.1 MGP_BALBcJ_G0030091.1 mouse_genomes_project 5 125300995 125561835 + MGP_BALBcJ_P0074564 Tmem132b protein_coding protein_coding MGP_BALBcJ_T0074565.1 MGP_BALBcJ_G0030091.1 mouse_genomes_project 5 125393880 125473932 + Tmem132b protein_coding retained_intron MGP_BALBcJ_T0008258.1 MGP_BALBcJ_G0006720.1 mouse_genomes_project 5 110242173 110243419 + Gm26515 lincRNA lincRNA MGP_BALBcJ_T0015184.1 MGP_BALBcJ_G0013281.1 mouse_genomes_project 5 147477591 147478083 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015168.1 MGP_BALBcJ_G0013265.1 mouse_genomes_project 5 144248578 144249535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015107.1 MGP_BALBcJ_G0013204.1 mouse_genomes_project 5 113606098 113607163 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071502.1 MGP_BALBcJ_G0029496.1 mouse_genomes_project 5 39457392 39514299 - MGP_BALBcJ_P0071502 Bod1l protein_coding protein_coding MGP_BALBcJ_T0071503.1 MGP_BALBcJ_G0029496.1 mouse_genomes_project 5 39457392 39514299 - MGP_BALBcJ_P0071503 Bod1l protein_coding protein_coding MGP_BALBcJ_T0071504.1 MGP_BALBcJ_G0029496.1 mouse_genomes_project 5 39491569 39493989 - Bod1l protein_coding processed_transcript MGP_BALBcJ_T0071505.1 MGP_BALBcJ_G0029496.1 mouse_genomes_project 5 39492461 39514276 - Bod1l protein_coding retained_intron MGP_BALBcJ_T0014995.1 MGP_BALBcJ_G0013092.1 mouse_genomes_project 5 67835981 67836265 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008042.1 MGP_BALBcJ_G0006562.1 mouse_genomes_project 5 22988451 22990923 + 4831440E17Rik lincRNA lincRNA MGP_BALBcJ_T0004816.1 MGP_BALBcJ_G0004148.1 mouse_genomes_project 5 124573519 124574031 - Gm43777 antisense antisense MGP_BALBcJ_T0072223.1 MGP_BALBcJ_G0029618.1 mouse_genomes_project 5 74181106 74194139 + Tmem165 protein_coding processed_transcript MGP_BALBcJ_T0072224.1 MGP_BALBcJ_G0029618.1 mouse_genomes_project 5 74181172 74205696 + MGP_BALBcJ_P0072224 Tmem165 protein_coding protein_coding MGP_BALBcJ_T0072225.1 MGP_BALBcJ_G0029618.1 mouse_genomes_project 5 74196554 74202265 + Tmem165 protein_coding retained_intron MGP_BALBcJ_T0072226.1 MGP_BALBcJ_G0029618.1 mouse_genomes_project 5 74201229 74203143 + Tmem165 protein_coding processed_transcript MGP_BALBcJ_T0071414.1 MGP_BALBcJ_G0029479.1 mouse_genomes_project 5 35130347 35388955 - MGP_BALBcJ_P0071414 Stk32b protein_coding protein_coding MGP_BALBcJ_T0071490.1 MGP_BALBcJ_G0029492.1 mouse_genomes_project 5 36374575 36541092 - MGP_BALBcJ_P0071490 Clnk protein_coding protein_coding MGP_BALBcJ_T0071491.1 MGP_BALBcJ_G0029492.1 mouse_genomes_project 5 36374575 36541092 - MGP_BALBcJ_P0071491 Clnk protein_coding protein_coding MGP_BALBcJ_T0014898.1 MGP_BALBcJ_G0012995.1 mouse_genomes_project 5 25571965 25573261 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075866.1 MGP_BALBcJ_G0030349.1 mouse_genomes_project 5 145419690 145439251 + MGP_BALBcJ_P0075866 Zkscan5 protein_coding protein_coding MGP_BALBcJ_T0075867.1 MGP_BALBcJ_G0030349.1 mouse_genomes_project 5 145419796 145439251 + MGP_BALBcJ_P0075867 Zkscan5 protein_coding protein_coding MGP_BALBcJ_T0075868.1 MGP_BALBcJ_G0030349.1 mouse_genomes_project 5 145420249 145436103 + MGP_BALBcJ_P0075868 Zkscan5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075869.1 MGP_BALBcJ_G0030349.1 mouse_genomes_project 5 145422802 145435967 + MGP_BALBcJ_P0075869 Zkscan5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075870.1 MGP_BALBcJ_G0030349.1 mouse_genomes_project 5 145422832 145436021 + MGP_BALBcJ_P0075870 Zkscan5 protein_coding protein_coding MGP_BALBcJ_T0075871.1 MGP_BALBcJ_G0030349.1 mouse_genomes_project 5 145424050 145435837 + Zkscan5 protein_coding processed_transcript MGP_BALBcJ_T0072492.1 MGP_BALBcJ_G0029684.1 mouse_genomes_project 5 86896236 86904009 - Jchain protein_coding retained_intron MGP_BALBcJ_T0072493.1 MGP_BALBcJ_G0029684.1 mouse_genomes_project 5 86897273 86906100 - MGP_BALBcJ_P0072493 Jchain protein_coding protein_coding MGP_BALBcJ_T0070334.1 MGP_BALBcJ_G0029302.1 mouse_genomes_project 5 19190414 19246268 - MGP_BALBcJ_P0070334 Slc26a5 protein_coding protein_coding MGP_BALBcJ_T0070335.1 MGP_BALBcJ_G0029302.1 mouse_genomes_project 5 19190414 19242664 - MGP_BALBcJ_P0070335 Slc26a5 protein_coding protein_coding MGP_BALBcJ_T0070336.1 MGP_BALBcJ_G0029302.1 mouse_genomes_project 5 19190777 19227760 - MGP_BALBcJ_P0070336 Slc26a5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070337.1 MGP_BALBcJ_G0029302.1 mouse_genomes_project 5 19190908 19227712 - MGP_BALBcJ_P0070337 Slc26a5 protein_coding protein_coding MGP_BALBcJ_T0070338.1 MGP_BALBcJ_G0029302.1 mouse_genomes_project 5 19195731 19200491 - Slc26a5 protein_coding retained_intron MGP_BALBcJ_T0073781.1 MGP_BALBcJ_G0029956.1 mouse_genomes_project 5 116002832 116018783 - MGP_BALBcJ_P0073781 Hspb8 protein_coding protein_coding MGP_BALBcJ_T0073782.1 MGP_BALBcJ_G0029956.1 mouse_genomes_project 5 116003281 116011549 - Hspb8 protein_coding processed_transcript MGP_BALBcJ_T0018131.1 MGP_BALBcJ_G0015545.1 mouse_genomes_project 5 88900325 88937793 - Gm43448 processed_transcript processed_transcript MGP_BALBcJ_T0018132.1 MGP_BALBcJ_G0015545.1 mouse_genomes_project 5 88918219 88937813 - Gm43448 processed_transcript processed_transcript MGP_BALBcJ_T0070677.1 MGP_BALBcJ_G0029367.1 mouse_genomes_project 5 28004142 28018980 + MGP_BALBcJ_P0070677 1700001C02Rik protein_coding protein_coding MGP_BALBcJ_T0070678.1 MGP_BALBcJ_G0029367.1 mouse_genomes_project 5 28004150 28022123 + MGP_BALBcJ_P0070678 1700001C02Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070679.1 MGP_BALBcJ_G0029367.1 mouse_genomes_project 5 28004154 28022167 + MGP_BALBcJ_P0070679 1700001C02Rik protein_coding protein_coding MGP_BALBcJ_T0070680.1 MGP_BALBcJ_G0029367.1 mouse_genomes_project 5 28004179 28022146 + MGP_BALBcJ_P0070680 1700001C02Rik protein_coding protein_coding MGP_BALBcJ_T0070840.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28738448 28744110 + MGP_BALBcJ_P0070840 Snx17 protein_coding protein_coding MGP_BALBcJ_T0070841.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28738463 28740656 + MGP_BALBcJ_P0070841 Snx17 protein_coding protein_coding MGP_BALBcJ_T0070842.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28738515 28744104 + MGP_BALBcJ_P0070842 Snx17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070843.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28738527 28744109 + Snx17 protein_coding retained_intron MGP_BALBcJ_T0070844.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28738527 28742266 + MGP_BALBcJ_P0070844 Snx17 protein_coding protein_coding MGP_BALBcJ_T0070845.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28738556 28744110 + MGP_BALBcJ_P0070845 Snx17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070846.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28739075 28744353 + Snx17 protein_coding retained_intron MGP_BALBcJ_T0070847.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28740064 28741644 + Snx17 protein_coding retained_intron MGP_BALBcJ_T0070848.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28740594 28742460 + Snx17 protein_coding retained_intron MGP_BALBcJ_T0070849.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28741052 28742920 + Snx17 protein_coding retained_intron MGP_BALBcJ_T0070850.1 MGP_BALBcJ_G0029393.1 mouse_genomes_project 5 28741260 28743354 + Snx17 protein_coding processed_transcript MGP_BALBcJ_T0001808.1 MGP_BALBcJ_G0001723.1 mouse_genomes_project 5 122538657 122545266 + TEC TEC MGP_BALBcJ_T0015017.1 MGP_BALBcJ_G0013114.1 mouse_genomes_project 5 76551264 76553147 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001443.1 MGP_BALBcJ_G0001364.1 mouse_genomes_project 5 9364976 9372443 - TEC TEC MGP_BALBcJ_T0072479.1 MGP_BALBcJ_G0029674.1 mouse_genomes_project 5 86248330 86250436 + MGP_BALBcJ_P0072479 Cabs1 protein_coding protein_coding MGP_BALBcJ_T0008444.1 MGP_BALBcJ_G0006847.1 mouse_genomes_project 5 149813682 149839580 + BC028471 lincRNA lincRNA MGP_BALBcJ_T0008445.1 MGP_BALBcJ_G0006847.1 mouse_genomes_project 5 149815092 149822837 + BC028471 lincRNA lincRNA MGP_BALBcJ_T0008446.1 MGP_BALBcJ_G0006847.1 mouse_genomes_project 5 149815094 149832435 + BC028471 lincRNA lincRNA MGP_BALBcJ_T0008447.1 MGP_BALBcJ_G0006847.1 mouse_genomes_project 5 149815309 149838470 + BC028471 lincRNA lincRNA MGP_BALBcJ_T0008448.1 MGP_BALBcJ_G0006847.1 mouse_genomes_project 5 149822802 149839580 + BC028471 lincRNA lincRNA MGP_BALBcJ_T0008449.1 MGP_BALBcJ_G0006847.1 mouse_genomes_project 5 149822814 149823636 + BC028471 lincRNA lincRNA MGP_BALBcJ_T0014967.1 MGP_BALBcJ_G0013064.1 mouse_genomes_project 5 57576713 57577125 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001589.1 MGP_BALBcJ_G0001506.1 mouse_genomes_project 5 49542206 49546018 - TEC TEC MGP_BALBcJ_T0072867.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99527937 99546439 - MGP_BALBcJ_P0072867 Fam175a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072868.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99527937 99546464 - MGP_BALBcJ_P0072868 Fam175a protein_coding protein_coding MGP_BALBcJ_T0072869.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99527937 99546442 - MGP_BALBcJ_P0072869 Fam175a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072870.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99527937 99546439 - MGP_BALBcJ_P0072870 Fam175a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072871.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99527948 99546439 - MGP_BALBcJ_P0072871 Fam175a protein_coding protein_coding MGP_BALBcJ_T0072872.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99529070 99530060 - Fam175a protein_coding retained_intron MGP_BALBcJ_T0072873.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99535294 99546440 - MGP_BALBcJ_P0072873 Fam175a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072874.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99543253 99546446 - Fam175a protein_coding retained_intron MGP_BALBcJ_T0072875.1 MGP_BALBcJ_G0029769.1 mouse_genomes_project 5 99543861 99546439 - Fam175a protein_coding retained_intron MGP_BALBcJ_T0074581.1 MGP_BALBcJ_G0030094.1 mouse_genomes_project 5 127418390 127484888 + Glt1d1 protein_coding retained_intron MGP_BALBcJ_T0074582.1 MGP_BALBcJ_G0030094.1 mouse_genomes_project 5 127418390 127506921 + MGP_BALBcJ_P0074582 Glt1d1 protein_coding protein_coding MGP_BALBcJ_T0074583.1 MGP_BALBcJ_G0030094.1 mouse_genomes_project 5 127445151 127482869 + Glt1d1 protein_coding retained_intron MGP_BALBcJ_T0001521.1 MGP_BALBcJ_G0001439.1 mouse_genomes_project 5 41173608 41177873 + TEC TEC MGP_BALBcJ_T0015021.1 MGP_BALBcJ_G0013118.1 mouse_genomes_project 5 79014257 79015132 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008021.1 MGP_BALBcJ_G0006548.1 mouse_genomes_project 5 11157773 11161810 + lincRNA lincRNA MGP_BALBcJ_T0073552.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113946195 113955197 + MGP_BALBcJ_P0073552 Mvk protein_coding protein_coding MGP_BALBcJ_T0073553.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113946212 113963403 + MGP_BALBcJ_P0073553 Mvk protein_coding protein_coding MGP_BALBcJ_T0073554.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113946220 113963510 + Mvk protein_coding retained_intron MGP_BALBcJ_T0073555.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113946229 113958479 + MGP_BALBcJ_P0073555 Mvk protein_coding protein_coding MGP_BALBcJ_T0073556.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113946229 113955197 + MGP_BALBcJ_P0073556 Mvk protein_coding protein_coding MGP_BALBcJ_T0073557.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113946232 113963517 + MGP_BALBcJ_P0073557 Mvk protein_coding protein_coding MGP_BALBcJ_T0073558.1 MGP_BALBcJ_G0029915.1 mouse_genomes_project 5 113954469 113963498 + MGP_BALBcJ_P0073558 Mvk protein_coding protein_coding MGP_BALBcJ_T0008212.1 MGP_BALBcJ_G0006689.1 mouse_genomes_project 5 100332362 100335423 + Gm20484 lincRNA lincRNA MGP_BALBcJ_T0014944.1 MGP_BALBcJ_G0013041.1 mouse_genomes_project 5 47100174 47100487 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014852.1 MGP_BALBcJ_G0012949.1 mouse_genomes_project 5 16183142 16183740 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015026.1 MGP_BALBcJ_G0013123.1 mouse_genomes_project 5 84180247 84180458 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008404.1 MGP_BALBcJ_G0006814.1 mouse_genomes_project 5 140670128 140671035 - Gm42808 lincRNA lincRNA MGP_BALBcJ_T0073335.1 MGP_BALBcJ_G0029871.1 mouse_genomes_project 5 110292492 110303114 - MGP_BALBcJ_P0073335 Hscb protein_coding protein_coding MGP_BALBcJ_T0073336.1 MGP_BALBcJ_G0029871.1 mouse_genomes_project 5 110292502 110302912 - MGP_BALBcJ_P0073336 Hscb protein_coding protein_coding MGP_BALBcJ_T0073337.1 MGP_BALBcJ_G0029871.1 mouse_genomes_project 5 110292502 110299827 - MGP_BALBcJ_P0073337 Hscb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073338.1 MGP_BALBcJ_G0029871.1 mouse_genomes_project 5 110292503 110298353 - Hscb protein_coding retained_intron MGP_BALBcJ_T0008214.1 MGP_BALBcJ_G0006691.1 mouse_genomes_project 5 100436567 100439674 + Gm43270 lincRNA lincRNA MGP_BALBcJ_T0075809.1 MGP_BALBcJ_G0030339.1 mouse_genomes_project 5 145074988 145084948 - Smurf1 protein_coding retained_intron MGP_BALBcJ_T0075810.1 MGP_BALBcJ_G0030339.1 mouse_genomes_project 5 145074988 145165889 - MGP_BALBcJ_P0075810 Smurf1 protein_coding protein_coding MGP_BALBcJ_T0075811.1 MGP_BALBcJ_G0030339.1 mouse_genomes_project 5 145074995 145165897 - MGP_BALBcJ_P0075811 Smurf1 protein_coding protein_coding MGP_BALBcJ_T0075812.1 MGP_BALBcJ_G0030339.1 mouse_genomes_project 5 145077582 145165897 - MGP_BALBcJ_P0075812 Smurf1 protein_coding protein_coding MGP_BALBcJ_T0075813.1 MGP_BALBcJ_G0030339.1 mouse_genomes_project 5 145083063 145097027 - MGP_BALBcJ_P0075813 Smurf1 protein_coding protein_coding MGP_BALBcJ_T0004876.1 MGP_BALBcJ_G0004193.1 mouse_genomes_project 5 151056254 151062523 - Gm42529 antisense antisense MGP_BALBcJ_T0001687.1 MGP_BALBcJ_G0001602.1 mouse_genomes_project 5 71609329 71609908 - TEC TEC MGP_BALBcJ_T0004836.1 MGP_BALBcJ_G0004164.1 mouse_genomes_project 5 135007521 135008405 - Gm43500 antisense antisense MGP_BALBcJ_T0075082.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136170301 136491059 - MGP_BALBcJ_P0075082 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075083.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136170301 136283133 - MGP_BALBcJ_P0075083 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075084.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136170301 136491043 - MGP_BALBcJ_P0075084 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075085.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136170676 136491073 - MGP_BALBcJ_P0075085 Cux1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075086.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136172587 136491058 - MGP_BALBcJ_P0075086 Cux1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075087.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136188924 136491240 - MGP_BALBcJ_P0075087 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075088.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136191219 136491041 - MGP_BALBcJ_P0075088 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075089.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136197307 136490130 - MGP_BALBcJ_P0075089 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075090.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136197338 136489211 - MGP_BALBcJ_P0075090 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075091.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136197345 136225325 - Cux1 protein_coding processed_transcript MGP_BALBcJ_T0075092.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136197643 136491014 - MGP_BALBcJ_P0075092 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075093.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136236380 136286372 - MGP_BALBcJ_P0075093 Cux1 protein_coding protein_coding MGP_BALBcJ_T0075094.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136285413 136491047 - Cux1 protein_coding retained_intron MGP_BALBcJ_T0075095.1 MGP_BALBcJ_G0030184.1 mouse_genomes_project 5 136405525 136491285 - Cux1 protein_coding retained_intron MGP_BALBcJ_T0008058.1 MGP_BALBcJ_G0006572.1 mouse_genomes_project 5 27666314 27671791 + Gm4961 lincRNA lincRNA MGP_BALBcJ_T0001524.1 MGP_BALBcJ_G0001442.1 mouse_genomes_project 5 41428085 41430611 + TEC TEC MGP_BALBcJ_T0071040.1 MGP_BALBcJ_G0029421.1 mouse_genomes_project 5 31009388 31047860 + MGP_BALBcJ_P0071040 Maea protein_coding protein_coding MGP_BALBcJ_T0071041.1 MGP_BALBcJ_G0029421.1 mouse_genomes_project 5 31009440 31037263 + MGP_BALBcJ_P0071041 Maea protein_coding protein_coding MGP_BALBcJ_T0071042.1 MGP_BALBcJ_G0029421.1 mouse_genomes_project 5 31009444 31034920 + MGP_BALBcJ_P0071042 Maea protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071043.1 MGP_BALBcJ_G0029421.1 mouse_genomes_project 5 31010064 31034971 + MGP_BALBcJ_P0071043 Maea protein_coding protein_coding MGP_BALBcJ_T0071044.1 MGP_BALBcJ_G0029421.1 mouse_genomes_project 5 31037138 31046385 + Maea protein_coding retained_intron MGP_BALBcJ_T0071045.1 MGP_BALBcJ_G0029421.1 mouse_genomes_project 5 31046160 31047113 + Maea protein_coding retained_intron MGP_BALBcJ_T0074959.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135296847 135437350 - MGP_BALBcJ_P0074959 Hip1 protein_coding protein_coding MGP_BALBcJ_T0074960.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135296851 135325407 - MGP_BALBcJ_P0074960 Hip1 protein_coding protein_coding MGP_BALBcJ_T0074961.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135319205 135320385 - Hip1 protein_coding retained_intron MGP_BALBcJ_T0074962.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135320511 135330656 - MGP_BALBcJ_P0074962 Hip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074963.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135324697 135437355 - Hip1 protein_coding retained_intron MGP_BALBcJ_T0074964.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135329041 135343116 - Hip1 protein_coding processed_transcript MGP_BALBcJ_T0074965.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135339916 135379426 - MGP_BALBcJ_P0074965 Hip1 protein_coding protein_coding MGP_BALBcJ_T0074966.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135342999 135348638 - Hip1 protein_coding retained_intron MGP_BALBcJ_T0074967.1 MGP_BALBcJ_G0030161.1 mouse_genomes_project 5 135349513 135437350 - Hip1 protein_coding retained_intron MGP_BALBcJ_T0008062.1 MGP_BALBcJ_G0006575.1 mouse_genomes_project 5 29998187 30006087 - Gm7596 lincRNA lincRNA MGP_BALBcJ_T0008063.1 MGP_BALBcJ_G0006575.1 mouse_genomes_project 5 29998213 30001483 - Gm7596 lincRNA lincRNA MGP_BALBcJ_T0015104.1 MGP_BALBcJ_G0013201.1 mouse_genomes_project 5 110474072 110474439 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010705.1 MGP_BALBcJ_G0008830.1 mouse_genomes_project 5 135745834 135745912 - Gm23268 miRNA miRNA MGP_BALBcJ_T0015096.1 MGP_BALBcJ_G0013193.1 mouse_genomes_project 5 108781314 108781891 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004838.1 MGP_BALBcJ_G0004166.1 mouse_genomes_project 5 136026333 136028166 - Gm15701 antisense antisense MGP_BALBcJ_T0075570.1 MGP_BALBcJ_G0030287.1 mouse_genomes_project 5 140691531 140693506 - MGP_BALBcJ_P0075570 Grifin protein_coding protein_coding MGP_BALBcJ_T0001648.1 MGP_BALBcJ_G0001564.1 mouse_genomes_project 5 64261149 64263202 - TEC TEC MGP_BALBcJ_T0004739.1 MGP_BALBcJ_G0004094.1 mouse_genomes_project 5 102862136 102868947 + Gm26703 antisense antisense MGP_BALBcJ_T0004740.1 MGP_BALBcJ_G0004094.1 mouse_genomes_project 5 102862210 102863847 + Gm26703 antisense antisense MGP_BALBcJ_T0004741.1 MGP_BALBcJ_G0004094.1 mouse_genomes_project 5 102866815 102872617 + Gm26703 antisense antisense MGP_BALBcJ_T0008183.1 MGP_BALBcJ_G0006668.1 mouse_genomes_project 5 91142804 91148892 - 4932430I15Rik lincRNA lincRNA MGP_BALBcJ_T0072483.1 MGP_BALBcJ_G0029677.1 mouse_genomes_project 5 86412333 86413297 - MGP_BALBcJ_P0072483 Gm11116 protein_coding protein_coding MGP_BALBcJ_T0004627.1 MGP_BALBcJ_G0004008.1 mouse_genomes_project 5 20620771 20644037 - Gm42948 antisense antisense MGP_BALBcJ_T0102569.1 MGP_BALBcJ_G0040385.1 mouse_genomes_project 5 85289020 85289783 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0074310.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123364921 123470958 - MGP_BALBcJ_P0074310 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074311.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123364921 123471254 - MGP_BALBcJ_P0074311 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074312.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123364933 123434778 - MGP_BALBcJ_P0074312 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074313.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123364933 123470908 - MGP_BALBcJ_P0074313 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074314.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123364944 123390719 - Clip1 protein_coding retained_intron MGP_BALBcJ_T0074315.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123364993 123365680 - Clip1 protein_coding processed_transcript MGP_BALBcJ_T0074316.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123365955 123470961 - MGP_BALBcJ_P0074316 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074317.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123366196 123399073 - Clip1 protein_coding retained_intron MGP_BALBcJ_T0074318.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123366366 123442846 - MGP_BALBcJ_P0074318 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074319.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123366573 123404723 - MGP_BALBcJ_P0074319 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074320.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123373310 123404364 - Clip1 protein_coding retained_intron MGP_BALBcJ_T0074321.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123377204 123390628 - Clip1 protein_coding retained_intron MGP_BALBcJ_T0074322.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123404557 123442736 - MGP_BALBcJ_P0074322 Clip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074323.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123404606 123453660 - MGP_BALBcJ_P0074323 Clip1 protein_coding protein_coding MGP_BALBcJ_T0074324.1 MGP_BALBcJ_G0030052.1 mouse_genomes_project 5 123420369 123423059 - Clip1 protein_coding retained_intron MGP_BALBcJ_T0073154.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107574952 107597093 - MGP_BALBcJ_P0073154 Gak protein_coding protein_coding MGP_BALBcJ_T0073155.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107574955 107635868 - MGP_BALBcJ_P0073155 Gak protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073156.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107574955 107635868 - MGP_BALBcJ_P0073156 Gak protein_coding protein_coding MGP_BALBcJ_T0073157.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107574961 107635868 - MGP_BALBcJ_P0073157 Gak protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073158.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107575714 107577407 - Gak protein_coding retained_intron MGP_BALBcJ_T0073159.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107576972 107635884 - MGP_BALBcJ_P0073159 Gak protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073160.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107577512 107582780 - Gak protein_coding processed_transcript MGP_BALBcJ_T0073161.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107582436 107586493 - Gak protein_coding retained_intron MGP_BALBcJ_T0073162.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107585613 107631223 - Gak protein_coding retained_intron MGP_BALBcJ_T0073163.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107588630 107597129 - MGP_BALBcJ_P0073163 Gak protein_coding protein_coding MGP_BALBcJ_T0073164.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107589906 107602327 - MGP_BALBcJ_P0073164 Gak protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073165.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107619391 107635552 - Gak protein_coding processed_transcript MGP_BALBcJ_T0073166.1 MGP_BALBcJ_G0029835.1 mouse_genomes_project 5 107629440 107635822 - MGP_BALBcJ_P0073166 Gak protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015199.1 MGP_BALBcJ_G0013296.1 mouse_genomes_project 5 151791116 151791640 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010653.1 MGP_BALBcJ_G0008778.1 mouse_genomes_project 5 29272221 29272331 - Mir3473e miRNA miRNA MGP_BALBcJ_T0014948.1 MGP_BALBcJ_G0013045.1 mouse_genomes_project 5 48549801 48550366 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014903.1 MGP_BALBcJ_G0013000.1 mouse_genomes_project 5 27361148 27361836 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099932.1 MGP_BALBcJ_G0037968.1 mouse_genomes_project 5 70187846 70187944 - Gm25768 snRNA snRNA MGP_BALBcJ_T0001712.1 MGP_BALBcJ_G0001627.1 mouse_genomes_project 5 90538607 90539165 - TEC TEC MGP_BALBcJ_T0015089.1 MGP_BALBcJ_G0013186.1 mouse_genomes_project 5 107830706 107832109 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076045.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150086666 150108460 - MGP_BALBcJ_P0076045 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076046.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150088923 150108627 - MGP_BALBcJ_P0076046 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076047.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150089224 150108498 - MGP_BALBcJ_P0076047 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076048.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150089548 150108627 - MGP_BALBcJ_P0076048 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076049.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150089834 150091553 - Hsph1 protein_coding retained_intron MGP_BALBcJ_T0076050.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150092272 150093567 - Hsph1 protein_coding retained_intron MGP_BALBcJ_T0076051.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150093061 150108627 - Hsph1 protein_coding retained_intron MGP_BALBcJ_T0076052.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150102272 150108665 - MGP_BALBcJ_P0076052 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076053.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150102728 150108579 - MGP_BALBcJ_P0076053 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076054.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150104327 150108640 - MGP_BALBcJ_P0076054 Hsph1 protein_coding protein_coding MGP_BALBcJ_T0076055.1 MGP_BALBcJ_G0030387.1 mouse_genomes_project 5 150104386 150106176 - Hsph1 protein_coding processed_transcript MGP_BALBcJ_T0008012.1 MGP_BALBcJ_G0006540.1 mouse_genomes_project 5 2822289 2823725 + Gm14145 lincRNA lincRNA MGP_BALBcJ_T0071458.1 MGP_BALBcJ_G0029487.1 mouse_genomes_project 5 35948843 35977450 + MGP_BALBcJ_P0071458 Otop1 protein_coding protein_coding MGP_BALBcJ_T0071459.1 MGP_BALBcJ_G0029487.1 mouse_genomes_project 5 35950272 35977458 + Otop1 protein_coding processed_transcript MGP_BALBcJ_T0071460.1 MGP_BALBcJ_G0029487.1 mouse_genomes_project 5 35950272 35977449 + MGP_BALBcJ_P0071460 Otop1 protein_coding protein_coding MGP_BALBcJ_T0071461.1 MGP_BALBcJ_G0029487.1 mouse_genomes_project 5 35959231 35976618 + Otop1 protein_coding processed_transcript MGP_BALBcJ_T0014857.1 MGP_BALBcJ_G0012954.1 mouse_genomes_project 5 18182578 18182953 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099960.1 MGP_BALBcJ_G0037996.1 mouse_genomes_project 5 110217213 110217320 + Gm22583 snRNA snRNA MGP_BALBcJ_T0001816.1 MGP_BALBcJ_G0001731.1 mouse_genomes_project 5 123471410 123471942 + TEC TEC MGP_BALBcJ_T0074184.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122491814 122512455 - MGP_BALBcJ_P0074184 Camkk2 protein_coding protein_coding MGP_BALBcJ_T0074185.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122492438 122502705 - MGP_BALBcJ_P0074185 Camkk2 protein_coding protein_coding MGP_BALBcJ_T0074186.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122492685 122538481 - MGP_BALBcJ_P0074186 Camkk2 protein_coding protein_coding MGP_BALBcJ_T0074187.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122499231 122538550 - Camkk2 protein_coding retained_intron MGP_BALBcJ_T0074188.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122505055 122523026 - MGP_BALBcJ_P0074188 Camkk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074189.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122506643 122538486 - Camkk2 protein_coding processed_transcript MGP_BALBcJ_T0074190.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122512420 122538432 - MGP_BALBcJ_P0074190 Camkk2 protein_coding protein_coding MGP_BALBcJ_T0074191.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122515448 122538476 - MGP_BALBcJ_P0074191 Camkk2 protein_coding protein_coding MGP_BALBcJ_T0074192.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122516715 122538560 - Camkk2 protein_coding retained_intron MGP_BALBcJ_T0074193.1 MGP_BALBcJ_G0030033.1 mouse_genomes_project 5 122523166 122538466 - MGP_BALBcJ_P0074193 Camkk2 protein_coding protein_coding MGP_BALBcJ_T0098623.1 MGP_BALBcJ_G0036677.1 mouse_genomes_project 5 149738708 149738814 - n-R5s180 rRNA rRNA MGP_BALBcJ_T0099906.1 MGP_BALBcJ_G0037942.1 mouse_genomes_project 5 19905997 19906104 - Gm22887 snRNA snRNA MGP_BALBcJ_T0072568.1 MGP_BALBcJ_G0029702.1 mouse_genomes_project 5 89125104 89127227 + Cxcl5 protein_coding retained_intron MGP_BALBcJ_T0072569.1 MGP_BALBcJ_G0029702.1 mouse_genomes_project 5 89125122 89127227 + MGP_BALBcJ_P0072569 Cxcl5 protein_coding protein_coding MGP_BALBcJ_T0075872.1 MGP_BALBcJ_G0030350.1 mouse_genomes_project 5 145449205 145470221 + MGP_BALBcJ_P0075872 Zfp655 protein_coding protein_coding MGP_BALBcJ_T0075873.1 MGP_BALBcJ_G0030350.1 mouse_genomes_project 5 145449237 145470220 + MGP_BALBcJ_P0075873 Zfp655 protein_coding protein_coding MGP_BALBcJ_T0075874.1 MGP_BALBcJ_G0030350.1 mouse_genomes_project 5 145449238 145454917 + MGP_BALBcJ_P0075874 Zfp655 protein_coding protein_coding MGP_BALBcJ_T0075875.1 MGP_BALBcJ_G0030350.1 mouse_genomes_project 5 145449239 145454787 + MGP_BALBcJ_P0075875 Zfp655 protein_coding protein_coding MGP_BALBcJ_T0075876.1 MGP_BALBcJ_G0030350.1 mouse_genomes_project 5 145450920 145454751 + MGP_BALBcJ_P0075876 Zfp655 protein_coding protein_coding MGP_BALBcJ_T0075739.1 MGP_BALBcJ_G0030324.1 mouse_genomes_project 5 144025712 144030023 - MGP_BALBcJ_P0075739 Ankrd61 protein_coding protein_coding MGP_BALBcJ_T0075740.1 MGP_BALBcJ_G0030324.1 mouse_genomes_project 5 144025712 144029986 - MGP_BALBcJ_P0075740 Ankrd61 protein_coding protein_coding MGP_BALBcJ_T0075741.1 MGP_BALBcJ_G0030324.1 mouse_genomes_project 5 144025714 144032654 - MGP_BALBcJ_P0075741 Ankrd61 protein_coding protein_coding MGP_BALBcJ_T0070093.1 MGP_BALBcJ_G0029259.1 mouse_genomes_project 5 4332136 4332509 + 4921511H03Rik protein_coding processed_transcript MGP_BALBcJ_T0070094.1 MGP_BALBcJ_G0029259.1 mouse_genomes_project 5 4332142 4339513 + MGP_BALBcJ_P0070094 4921511H03Rik protein_coding protein_coding MGP_BALBcJ_T0070095.1 MGP_BALBcJ_G0029259.1 mouse_genomes_project 5 4332149 4335590 + MGP_BALBcJ_P0070095 4921511H03Rik protein_coding protein_coding MGP_BALBcJ_T0070096.1 MGP_BALBcJ_G0029259.1 mouse_genomes_project 5 4332163 4333826 + MGP_BALBcJ_P0070096 4921511H03Rik protein_coding protein_coding MGP_BALBcJ_T0073350.1 MGP_BALBcJ_G0029874.1 mouse_genomes_project 5 110792175 110844734 + MGP_BALBcJ_P0073350 Pitpnb protein_coding protein_coding MGP_BALBcJ_T0073351.1 MGP_BALBcJ_G0029874.1 mouse_genomes_project 5 110792219 110844734 + MGP_BALBcJ_P0073351 Pitpnb protein_coding protein_coding MGP_BALBcJ_T0073352.1 MGP_BALBcJ_G0029874.1 mouse_genomes_project 5 110792226 110844740 + MGP_BALBcJ_P0073352 Pitpnb protein_coding unknown_likely_coding MGP_BALBcJ_T0073353.1 MGP_BALBcJ_G0029874.1 mouse_genomes_project 5 110807954 110839504 + Pitpnb protein_coding processed_transcript MGP_BALBcJ_T0073354.1 MGP_BALBcJ_G0029874.1 mouse_genomes_project 5 110836555 110840094 + Pitpnb protein_coding retained_intron MGP_BALBcJ_T0001739.1 MGP_BALBcJ_G0001654.1 mouse_genomes_project 5 104440790 104442975 + TEC TEC MGP_BALBcJ_T0011591.1 MGP_BALBcJ_G0009716.1 mouse_genomes_project 5 124064267 124064531 + Gm23171 misc_RNA misc_RNA MGP_BALBcJ_T0071703.1 MGP_BALBcJ_G0029528.1 mouse_genomes_project 5 50713581 50736891 + MGP_BALBcJ_P0071703 Slc34a2 protein_coding protein_coding MGP_BALBcJ_T0071704.1 MGP_BALBcJ_G0029528.1 mouse_genomes_project 5 50724849 50747428 + MGP_BALBcJ_P0071704 Slc34a2 protein_coding protein_coding MGP_BALBcJ_T0071705.1 MGP_BALBcJ_G0029528.1 mouse_genomes_project 5 50724850 50742001 + Slc34a2 protein_coding retained_intron MGP_BALBcJ_T0075603.1 MGP_BALBcJ_G0030293.1 mouse_genomes_project 5 140895140 140967906 - MGP_BALBcJ_P0075603 Gna12 protein_coding protein_coding MGP_BALBcJ_T0072935.1 MGP_BALBcJ_G0029783.1 mouse_genomes_project 5 102797624 102809581 + MGP_BALBcJ_P0072935 Nudt9 protein_coding protein_coding MGP_BALBcJ_T0072936.1 MGP_BALBcJ_G0029783.1 mouse_genomes_project 5 102797844 102811161 + MGP_BALBcJ_P0072936 Nudt9 protein_coding protein_coding MGP_BALBcJ_T0072937.1 MGP_BALBcJ_G0029783.1 mouse_genomes_project 5 102798187 102816758 + MGP_BALBcJ_P0072937 Nudt9 protein_coding protein_coding MGP_BALBcJ_T0072938.1 MGP_BALBcJ_G0029783.1 mouse_genomes_project 5 102798286 102809815 + Nudt9 protein_coding retained_intron MGP_BALBcJ_T0072939.1 MGP_BALBcJ_G0029783.1 mouse_genomes_project 5 102798472 102809561 + MGP_BALBcJ_P0072939 Nudt9 protein_coding protein_coding MGP_BALBcJ_T0072940.1 MGP_BALBcJ_G0029783.1 mouse_genomes_project 5 102798939 102806904 + MGP_BALBcJ_P0072940 Nudt9 protein_coding protein_coding MGP_BALBcJ_T0073803.1 MGP_BALBcJ_G0029960.1 mouse_genomes_project 5 116890831 116895819 - MGP_BALBcJ_P0073803 Pebp1 protein_coding protein_coding MGP_BALBcJ_T0073804.1 MGP_BALBcJ_G0029960.1 mouse_genomes_project 5 116891316 116895777 - MGP_BALBcJ_P0073804 Pebp1 protein_coding protein_coding MGP_BALBcJ_T0073805.1 MGP_BALBcJ_G0029960.1 mouse_genomes_project 5 116891521 116895762 - MGP_BALBcJ_P0073805 Pebp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073806.1 MGP_BALBcJ_G0029960.1 mouse_genomes_project 5 116893987 116895719 - Pebp1 protein_coding retained_intron MGP_BALBcJ_T0015029.1 MGP_BALBcJ_G0013126.1 mouse_genomes_project 5 85303197 85303273 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008034.1 MGP_BALBcJ_G0006556.1 mouse_genomes_project 5 20791078 20803749 - lincRNA lincRNA MGP_BALBcJ_T0101184.1 MGP_BALBcJ_G0039220.1 mouse_genomes_project 5 5259457 5259601 + Gm23993 snoRNA snoRNA MGP_BALBcJ_T0076082.1 MGP_BALBcJ_G0030391.1 mouse_genomes_project 5 151000481 151012748 - MGP_BALBcJ_P0076082 Zar1l protein_coding protein_coding MGP_BALBcJ_T0070851.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28744190 28747513 - MGP_BALBcJ_P0070851 Zfp513 protein_coding protein_coding MGP_BALBcJ_T0070852.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28744192 28747252 - MGP_BALBcJ_P0070852 Zfp513 protein_coding protein_coding MGP_BALBcJ_T0070853.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28744709 28745971 - Zfp513 protein_coding processed_transcript MGP_BALBcJ_T0070854.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28744990 28745496 - MGP_BALBcJ_P0070854 Zfp513 protein_coding protein_coding MGP_BALBcJ_T0070855.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28745090 28745972 - Zfp513 protein_coding processed_transcript MGP_BALBcJ_T0070856.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28745198 28745972 - Zfp513 protein_coding processed_transcript MGP_BALBcJ_T0070857.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28745878 28747425 - MGP_BALBcJ_P0070857 Zfp513 protein_coding protein_coding MGP_BALBcJ_T0070858.1 MGP_BALBcJ_G0029394.1 mouse_genomes_project 5 28745965 28747435 - MGP_BALBcJ_P0070858 Zfp513 protein_coding protein_coding MGP_BALBcJ_T0001774.1 MGP_BALBcJ_G0001689.1 mouse_genomes_project 5 115484607 115486472 + TEC TEC MGP_BALBcJ_T0014928.1 MGP_BALBcJ_G0013025.1 mouse_genomes_project 5 36237783 36238182 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070550.1 MGP_BALBcJ_G0029341.1 mouse_genomes_project 5 23259097 23276109 + Actr3b protein_coding processed_transcript MGP_BALBcJ_T0070551.1 MGP_BALBcJ_G0029341.1 mouse_genomes_project 5 23259143 23347641 + MGP_BALBcJ_P0070551 Actr3b protein_coding protein_coding MGP_BALBcJ_T0075938.1 MGP_BALBcJ_G0030371.1 mouse_genomes_project 5 147714497 147784743 - MGP_BALBcJ_P0075938 Flt3 protein_coding protein_coding MGP_BALBcJ_T0075939.1 MGP_BALBcJ_G0030371.1 mouse_genomes_project 5 147746492 147784743 - Flt3 protein_coding processed_transcript MGP_BALBcJ_T0004693.1 MGP_BALBcJ_G0004061.1 mouse_genomes_project 5 65575913 65580285 + Gm15478 antisense antisense MGP_BALBcJ_T0075635.1 MGP_BALBcJ_G0030302.1 mouse_genomes_project 5 142857637 142878438 + MGP_BALBcJ_P0075635 Slc29a4 protein_coding protein_coding MGP_BALBcJ_T0075636.1 MGP_BALBcJ_G0030302.1 mouse_genomes_project 5 142867736 142889140 + MGP_BALBcJ_P0075636 Slc29a4 protein_coding protein_coding MGP_BALBcJ_T0071591.1 MGP_BALBcJ_G0029512.1 mouse_genomes_project 5 43182783 43190689 - Fam184b protein_coding retained_intron MGP_BALBcJ_T0071592.1 MGP_BALBcJ_G0029512.1 mouse_genomes_project 5 43182783 43285171 - MGP_BALBcJ_P0071592 Fam184b protein_coding protein_coding MGP_BALBcJ_T0073952.1 MGP_BALBcJ_G0029996.1 mouse_genomes_project 5 120625408 120632029 + MGP_BALBcJ_P0073952 Oas1d protein_coding protein_coding MGP_BALBcJ_T0008022.1 MGP_BALBcJ_G0006549.1 mouse_genomes_project 5 13222351 13245450 - 4930519H02Rik lincRNA lincRNA MGP_BALBcJ_T0008023.1 MGP_BALBcJ_G0006549.1 mouse_genomes_project 5 13226151 13245513 - 4930519H02Rik lincRNA lincRNA MGP_BALBcJ_T0004769.1 MGP_BALBcJ_G0004117.1 mouse_genomes_project 5 114999957 115000536 - 4930430O22Rik antisense antisense MGP_BALBcJ_T0004770.1 MGP_BALBcJ_G0004117.1 mouse_genomes_project 5 114999959 115000498 - 4930430O22Rik antisense antisense MGP_BALBcJ_T0072700.1 MGP_BALBcJ_G0029733.1 mouse_genomes_project 5 91386335 91390434 - MGP_BALBcJ_P0072700 Sowahb protein_coding protein_coding MGP_BALBcJ_T0072763.1 MGP_BALBcJ_G0029748.1 mouse_genomes_project 5 96858945 96866937 + MGP_BALBcJ_P0072763 Prdm8 protein_coding protein_coding MGP_BALBcJ_T0001482.1 MGP_BALBcJ_G0001402.1 mouse_genomes_project 5 26828235 26832531 - TEC TEC MGP_BALBcJ_T0073067.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106519749 106562443 - MGP_BALBcJ_P0073067 Glmn protein_coding protein_coding MGP_BALBcJ_T0073068.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106519751 106562388 - MGP_BALBcJ_P0073068 Glmn protein_coding protein_coding MGP_BALBcJ_T0073069.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106519804 106521951 - Glmn protein_coding retained_intron MGP_BALBcJ_T0073070.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106519805 106562661 - MGP_BALBcJ_P0073070 Glmn protein_coding protein_coding MGP_BALBcJ_T0073071.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106519806 106562355 - MGP_BALBcJ_P0073071 Glmn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073072.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106542803 106562377 - Glmn protein_coding processed_transcript MGP_BALBcJ_T0073073.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106545808 106562443 - Glmn protein_coding processed_transcript MGP_BALBcJ_T0073074.1 MGP_BALBcJ_G0029818.1 mouse_genomes_project 5 106545842 106562357 - MGP_BALBcJ_P0073074 Glmn protein_coding protein_coding MGP_BALBcJ_T0014964.1 MGP_BALBcJ_G0013061.1 mouse_genomes_project 5 56804043 56804737 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072306.1 MGP_BALBcJ_G0029632.1 mouse_genomes_project 5 75214833 75220662 - MGP_BALBcJ_P0072306 Spink2 protein_coding protein_coding MGP_BALBcJ_T0072307.1 MGP_BALBcJ_G0029632.1 mouse_genomes_project 5 75214833 75220629 - MGP_BALBcJ_P0072307 Spink2 protein_coding protein_coding MGP_BALBcJ_T0072308.1 MGP_BALBcJ_G0029632.1 mouse_genomes_project 5 75214838 75220396 - MGP_BALBcJ_P0072308 Spink2 protein_coding protein_coding MGP_BALBcJ_T0010694.1 MGP_BALBcJ_G0008819.1 mouse_genomes_project 5 121570245 121570310 - Mir7031 miRNA miRNA MGP_BALBcJ_T0004699.1 MGP_BALBcJ_G0004066.1 mouse_genomes_project 5 71122251 71123123 + 1700071G01Rik antisense antisense MGP_BALBcJ_T0015160.1 MGP_BALBcJ_G0013257.1 mouse_genomes_project 5 142437760 142438724 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074431.1 MGP_BALBcJ_G0030069.1 mouse_genomes_project 5 124151204 124157535 - MGP_BALBcJ_P0074431 protein_coding protein_coding MGP_BALBcJ_T0074432.1 MGP_BALBcJ_G0030069.1 mouse_genomes_project 5 124151343 124156135 - MGP_BALBcJ_P0074432 protein_coding protein_coding MGP_BALBcJ_T0074433.1 MGP_BALBcJ_G0030069.1 mouse_genomes_project 5 124151362 124158114 - MGP_BALBcJ_P0074433 protein_coding protein_coding MGP_BALBcJ_T0074434.1 MGP_BALBcJ_G0030069.1 mouse_genomes_project 5 124151626 124170160 - MGP_BALBcJ_P0074434 protein_coding protein_coding MGP_BALBcJ_T0071125.1 MGP_BALBcJ_G0029434.1 mouse_genomes_project 5 31675651 31685586 + MGP_BALBcJ_P0071125 Nat8l protein_coding protein_coding MGP_BALBcJ_T0071126.1 MGP_BALBcJ_G0029434.1 mouse_genomes_project 5 31679430 31680511 + Nat8l protein_coding processed_transcript MGP_BALBcJ_T0015003.1 MGP_BALBcJ_G0013100.1 mouse_genomes_project 5 71435505 71436412 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098617.1 MGP_BALBcJ_G0036671.1 mouse_genomes_project 5 116803335 116803456 + n-R5s174 rRNA rRNA MGP_BALBcJ_T0014934.1 MGP_BALBcJ_G0013031.1 mouse_genomes_project 5 39604543 39609644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072416.1 MGP_BALBcJ_G0029656.1 mouse_genomes_project 5 85426444 85441197 - MGP_BALBcJ_P0072416 Ugt2b37 protein_coding protein_coding MGP_BALBcJ_T0015067.1 MGP_BALBcJ_G0013164.1 mouse_genomes_project 5 101688934 101689189 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008373.1 MGP_BALBcJ_G0006793.1 mouse_genomes_project 5 128316366 128317863 - 4930573I07Rik lincRNA lincRNA MGP_BALBcJ_T0008374.1 MGP_BALBcJ_G0006793.1 mouse_genomes_project 5 128316368 128317886 - 4930573I07Rik lincRNA lincRNA MGP_BALBcJ_T0099933.1 MGP_BALBcJ_G0037969.1 mouse_genomes_project 5 70923950 70924036 - Gm24776 snRNA snRNA MGP_BALBcJ_T0072227.1 MGP_BALBcJ_G0029619.1 mouse_genomes_project 5 74206977 74302693 - MGP_BALBcJ_P0072227 Clock protein_coding protein_coding MGP_BALBcJ_T0072228.1 MGP_BALBcJ_G0029619.1 mouse_genomes_project 5 74209286 74302449 - MGP_BALBcJ_P0072228 Clock protein_coding protein_coding MGP_BALBcJ_T0072229.1 MGP_BALBcJ_G0029619.1 mouse_genomes_project 5 74210962 74273431 - MGP_BALBcJ_P0072229 Clock protein_coding protein_coding MGP_BALBcJ_T0072230.1 MGP_BALBcJ_G0029619.1 mouse_genomes_project 5 74234752 74302655 - Clock protein_coding retained_intron MGP_BALBcJ_T0072231.1 MGP_BALBcJ_G0029619.1 mouse_genomes_project 5 74253191 74302673 - Clock protein_coding processed_transcript MGP_BALBcJ_T0072232.1 MGP_BALBcJ_G0029619.1 mouse_genomes_project 5 74271372 74302673 - Clock protein_coding retained_intron MGP_BALBcJ_T0011589.1 MGP_BALBcJ_G0009714.1 mouse_genomes_project 5 111690054 111690189 - Gm27357 misc_RNA misc_RNA MGP_BALBcJ_T0073355.1 MGP_BALBcJ_G0029875.1 mouse_genomes_project 5 110876051 110876763 + Mn1 protein_coding processed_transcript MGP_BALBcJ_T0073356.1 MGP_BALBcJ_G0029875.1 mouse_genomes_project 5 110876131 110917114 + MGP_BALBcJ_P0073356 Mn1 protein_coding protein_coding MGP_BALBcJ_T0001592.1 MGP_BALBcJ_G0001509.1 mouse_genomes_project 5 49813332 49814723 - TEC TEC MGP_BALBcJ_T0072634.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90632348 90660770 - MGP_BALBcJ_P0072634 Sdad1 protein_coding protein_coding MGP_BALBcJ_T0072635.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90635080 90660640 - MGP_BALBcJ_P0072635 Sdad1 protein_coding protein_coding MGP_BALBcJ_T0072636.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90641552 90646868 - Sdad1 protein_coding retained_intron MGP_BALBcJ_T0072637.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90642379 90650996 - Sdad1 protein_coding retained_intron MGP_BALBcJ_T0072638.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90652314 90660735 - Sdad1 protein_coding retained_intron MGP_BALBcJ_T0072639.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90654339 90655401 - Sdad1 protein_coding retained_intron MGP_BALBcJ_T0072640.1 MGP_BALBcJ_G0029723.1 mouse_genomes_project 5 90656477 90661226 - MGP_BALBcJ_P0072640 Sdad1 protein_coding protein_coding MGP_BALBcJ_T0008244.1 MGP_BALBcJ_G0006714.1 mouse_genomes_project 5 107371217 107373128 + Gm10419 lincRNA lincRNA MGP_BALBcJ_T0008245.1 MGP_BALBcJ_G0006714.1 mouse_genomes_project 5 107371239 107376256 + Gm10419 lincRNA lincRNA MGP_BALBcJ_T0008246.1 MGP_BALBcJ_G0006714.1 mouse_genomes_project 5 107371684 107379311 + Gm10419 lincRNA lincRNA MGP_BALBcJ_T0008247.1 MGP_BALBcJ_G0006714.1 mouse_genomes_project 5 107373306 107381677 + Gm10419 lincRNA lincRNA MGP_BALBcJ_T0008248.1 MGP_BALBcJ_G0006714.1 mouse_genomes_project 5 107374310 107376257 + Gm10419 lincRNA lincRNA MGP_BALBcJ_T0075687.1 MGP_BALBcJ_G0030312.1 mouse_genomes_project 5 143445818 143466321 - MGP_BALBcJ_P0075687 Zfp316 protein_coding protein_coding MGP_BALBcJ_T0075688.1 MGP_BALBcJ_G0030312.1 mouse_genomes_project 5 143446410 143452322 - Zfp316 protein_coding retained_intron MGP_BALBcJ_T0075689.1 MGP_BALBcJ_G0030312.1 mouse_genomes_project 5 143449330 143460959 - MGP_BALBcJ_P0075689 Zfp316 protein_coding protein_coding MGP_BALBcJ_T0015187.1 MGP_BALBcJ_G0013284.1 mouse_genomes_project 5 147822295 147822517 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074735.1 MGP_BALBcJ_G0030127.1 mouse_genomes_project 5 130694955 131130993 - MGP_BALBcJ_P0074735 Wbscr17 protein_coding protein_coding MGP_BALBcJ_T0074736.1 MGP_BALBcJ_G0030127.1 mouse_genomes_project 5 130787351 131130572 - MGP_BALBcJ_P0074736 Wbscr17 protein_coding protein_coding MGP_BALBcJ_T0074737.1 MGP_BALBcJ_G0030127.1 mouse_genomes_project 5 130905938 131129411 - Wbscr17 protein_coding retained_intron MGP_BALBcJ_T0074738.1 MGP_BALBcJ_G0030127.1 mouse_genomes_project 5 130973296 131130369 - Wbscr17 protein_coding retained_intron MGP_BALBcJ_T0074739.1 MGP_BALBcJ_G0030127.1 mouse_genomes_project 5 131129345 131130574 - Wbscr17 protein_coding processed_transcript MGP_BALBcJ_T0015076.1 MGP_BALBcJ_G0013173.1 mouse_genomes_project 5 105307691 105308014 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074674.1 MGP_BALBcJ_G0030114.1 mouse_genomes_project 5 129743820 129786619 + MGP_BALBcJ_P0074674 Vkorc1l1 protein_coding protein_coding MGP_BALBcJ_T0074675.1 MGP_BALBcJ_G0030114.1 mouse_genomes_project 5 129743959 129788555 + MGP_BALBcJ_P0074675 Vkorc1l1 protein_coding protein_coding MGP_BALBcJ_T0074676.1 MGP_BALBcJ_G0030114.1 mouse_genomes_project 5 129744024 129784349 + MGP_BALBcJ_P0074676 Vkorc1l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015018.1 MGP_BALBcJ_G0013115.1 mouse_genomes_project 5 76616794 76617158 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070905.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28843669 28877079 + MGP_BALBcJ_P0070905 Gckr protein_coding protein_coding MGP_BALBcJ_T0070906.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28843780 28877060 + Gckr protein_coding retained_intron MGP_BALBcJ_T0070907.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28843807 28877067 + MGP_BALBcJ_P0070907 Gckr protein_coding protein_coding MGP_BALBcJ_T0070908.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28843838 28846809 + MGP_BALBcJ_P0070908 Gckr protein_coding protein_coding MGP_BALBcJ_T0070909.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28844929 28852776 + Gckr protein_coding retained_intron MGP_BALBcJ_T0070910.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28845734 28851682 + Gckr protein_coding retained_intron MGP_BALBcJ_T0070911.1 MGP_BALBcJ_G0029401.1 mouse_genomes_project 5 28875995 28877062 + Gckr protein_coding retained_intron MGP_BALBcJ_T0099921.1 MGP_BALBcJ_G0037957.1 mouse_genomes_project 5 49991550 49991655 - Gm25601 snRNA snRNA MGP_BALBcJ_T0004614.1 MGP_BALBcJ_G0003997.1 mouse_genomes_project 5 2822289 2835608 + antisense antisense MGP_BALBcJ_T0072233.1 MGP_BALBcJ_G0029620.1 mouse_genomes_project 5 74310013 74329957 - MGP_BALBcJ_P0072233 Pdcl2 protein_coding protein_coding MGP_BALBcJ_T0072234.1 MGP_BALBcJ_G0029620.1 mouse_genomes_project 5 74310025 74329980 - MGP_BALBcJ_P0072234 Pdcl2 protein_coding protein_coding MGP_BALBcJ_T0004761.1 MGP_BALBcJ_G0004111.1 mouse_genomes_project 5 113332710 113333226 + Gm17122 antisense antisense MGP_BALBcJ_T0071790.1 MGP_BALBcJ_G0029545.1 mouse_genomes_project 5 62824641 62833136 - MGP_BALBcJ_P0071790 Tlr1 protein_coding protein_coding MGP_BALBcJ_T0071791.1 MGP_BALBcJ_G0029545.1 mouse_genomes_project 5 62824642 62832336 - MGP_BALBcJ_P0071791 Tlr1 protein_coding protein_coding MGP_BALBcJ_T0071792.1 MGP_BALBcJ_G0029545.1 mouse_genomes_project 5 62832518 62833138 - Tlr1 protein_coding processed_transcript MGP_BALBcJ_T0001674.1 MGP_BALBcJ_G0001590.1 mouse_genomes_project 5 67197720 67199891 - TEC TEC MGP_BALBcJ_T0099946.1 MGP_BALBcJ_G0037982.1 mouse_genomes_project 5 89564306 89564413 - Gm23092 snRNA snRNA MGP_BALBcJ_T0071793.1 MGP_BALBcJ_G0029546.1 mouse_genomes_project 5 62850571 62859560 - MGP_BALBcJ_P0071793 Tlr6 protein_coding protein_coding MGP_BALBcJ_T0071794.1 MGP_BALBcJ_G0029546.1 mouse_genomes_project 5 62854735 62859610 - MGP_BALBcJ_P0071794 Tlr6 protein_coding protein_coding MGP_BALBcJ_T0072303.1 MGP_BALBcJ_G0029631.1 mouse_genomes_project 5 75088129 75097270 - MGP_BALBcJ_P0072303 Hopx protein_coding protein_coding MGP_BALBcJ_T0072304.1 MGP_BALBcJ_G0029631.1 mouse_genomes_project 5 75088130 75117152 - MGP_BALBcJ_P0072304 Hopx protein_coding protein_coding MGP_BALBcJ_T0072305.1 MGP_BALBcJ_G0029631.1 mouse_genomes_project 5 75088130 75097246 - MGP_BALBcJ_P0072305 Hopx protein_coding protein_coding MGP_BALBcJ_T0018113.1 MGP_BALBcJ_G0015539.1 mouse_genomes_project 5 62589235 62691293 - Gm20033 processed_transcript antisense MGP_BALBcJ_T0018114.1 MGP_BALBcJ_G0015539.1 mouse_genomes_project 5 62589239 62590004 - Gm20033 processed_transcript retained_intron MGP_BALBcJ_T0018115.1 MGP_BALBcJ_G0015539.1 mouse_genomes_project 5 62589351 62599605 - Gm20033 processed_transcript retained_intron MGP_BALBcJ_T0018116.1 MGP_BALBcJ_G0015539.1 mouse_genomes_project 5 62590847 62607568 - Gm20033 processed_transcript processed_transcript MGP_BALBcJ_T0018117.1 MGP_BALBcJ_G0015539.1 mouse_genomes_project 5 62689552 62691012 - Gm20033 processed_transcript retained_intron MGP_BALBcJ_T0018118.1 MGP_BALBcJ_G0015539.1 mouse_genomes_project 5 62689648 62691292 - Gm20033 processed_transcript antisense MGP_BALBcJ_T0071237.1 MGP_BALBcJ_G0029449.1 mouse_genomes_project 5 32605233 32618302 + Msantd1 protein_coding processed_transcript MGP_BALBcJ_T0071238.1 MGP_BALBcJ_G0029449.1 mouse_genomes_project 5 32615573 32624051 + MGP_BALBcJ_P0071238 Msantd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0071239.1 MGP_BALBcJ_G0029449.1 mouse_genomes_project 5 32616400 32624326 + MGP_BALBcJ_P0071239 Msantd1 protein_coding protein_coding MGP_BALBcJ_T0071240.1 MGP_BALBcJ_G0029449.1 mouse_genomes_project 5 32618024 32624177 + MGP_BALBcJ_P0071240 Msantd1 protein_coding protein_coding MGP_BALBcJ_T0004643.1 MGP_BALBcJ_G0004020.1 mouse_genomes_project 5 29605826 29610714 - Gm17130 antisense antisense MGP_BALBcJ_T0074723.1 MGP_BALBcJ_G0030123.1 mouse_genomes_project 5 130068605 130098699 + Tyw1 protein_coding retained_intron MGP_BALBcJ_T0074724.1 MGP_BALBcJ_G0030123.1 mouse_genomes_project 5 130070018 130091056 + MGP_BALBcJ_P0074724 Tyw1 protein_coding protein_coding MGP_BALBcJ_T0074725.1 MGP_BALBcJ_G0030123.1 mouse_genomes_project 5 130070018 130155036 + MGP_BALBcJ_P0074725 Tyw1 protein_coding protein_coding MGP_BALBcJ_T0074726.1 MGP_BALBcJ_G0030123.1 mouse_genomes_project 5 130072070 130082728 + MGP_BALBcJ_P0074726 Tyw1 protein_coding protein_coding MGP_BALBcJ_T0075200.1 MGP_BALBcJ_G0030205.1 mouse_genomes_project 5 137413162 137415959 - MGP_BALBcJ_P0075200 Epo protein_coding protein_coding MGP_BALBcJ_T0075201.1 MGP_BALBcJ_G0030205.1 mouse_genomes_project 5 137413162 137463870 - MGP_BALBcJ_P0075201 Epo protein_coding protein_coding MGP_BALBcJ_T0075202.1 MGP_BALBcJ_G0030205.1 mouse_genomes_project 5 137413168 137415959 - MGP_BALBcJ_P0075202 Epo protein_coding protein_coding MGP_BALBcJ_T0073487.1 MGP_BALBcJ_G0029903.1 mouse_genomes_project 5 113429819 113488096 - MGP_BALBcJ_P0073487 Ssh1 protein_coding protein_coding MGP_BALBcJ_T0073488.1 MGP_BALBcJ_G0029903.1 mouse_genomes_project 5 113432481 113487981 - MGP_BALBcJ_P0073488 Ssh1 protein_coding protein_coding MGP_BALBcJ_T0073489.1 MGP_BALBcJ_G0029903.1 mouse_genomes_project 5 113434889 113483944 - MGP_BALBcJ_P0073489 Ssh1 protein_coding protein_coding MGP_BALBcJ_T0073490.1 MGP_BALBcJ_G0029903.1 mouse_genomes_project 5 113454408 113488029 - MGP_BALBcJ_P0073490 Ssh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073491.1 MGP_BALBcJ_G0029903.1 mouse_genomes_project 5 113458630 113459787 - MGP_BALBcJ_P0073491 Ssh1 protein_coding protein_coding MGP_BALBcJ_T0073492.1 MGP_BALBcJ_G0029903.1 mouse_genomes_project 5 113459634 113487969 - Ssh1 protein_coding retained_intron MGP_BALBcJ_T0018099.1 MGP_BALBcJ_G0015534.1 mouse_genomes_project 5 41711077 41732837 - Gm42716 processed_transcript sense_intronic MGP_BALBcJ_T0018100.1 MGP_BALBcJ_G0015534.1 mouse_genomes_project 5 41727223 41732781 - Gm42716 processed_transcript sense_intronic MGP_BALBcJ_T0018101.1 MGP_BALBcJ_G0015534.1 mouse_genomes_project 5 41732332 41734082 - Gm42716 processed_transcript retained_intron MGP_BALBcJ_T0014902.1 MGP_BALBcJ_G0012999.1 mouse_genomes_project 5 27347391 27347906 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102030.1 MGP_BALBcJ_G0039855.1 mouse_genomes_project 5 90304305 90308650 + unitary_pseudogene retained_intron MGP_BALBcJ_T0102031.1 MGP_BALBcJ_G0039855.1 mouse_genomes_project 5 90304806 90311680 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102032.1 MGP_BALBcJ_G0039855.1 mouse_genomes_project 5 90304820 90312599 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102033.1 MGP_BALBcJ_G0039855.1 mouse_genomes_project 5 90305249 90314091 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0010671.1 MGP_BALBcJ_G0008796.1 mouse_genomes_project 5 73892435 73892536 + Gm25374 miRNA miRNA MGP_BALBcJ_T0074740.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131257433 131350742 - MGP_BALBcJ_P0074740 Auts2 protein_coding protein_coding MGP_BALBcJ_T0074741.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131257442 132360744 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074742.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131257914 132360057 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074743.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131259191 131873288 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074744.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131259423 131297699 - MGP_BALBcJ_P0074744 Auts2 protein_coding protein_coding MGP_BALBcJ_T0074745.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131259527 132359280 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074746.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131260440 131280619 - MGP_BALBcJ_P0074746 Auts2 protein_coding protein_coding MGP_BALBcJ_T0074747.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131265535 131275876 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074748.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131290059 131292057 - Auts2 protein_coding retained_intron MGP_BALBcJ_T0074749.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131296001 131353064 - Auts2 protein_coding retained_intron MGP_BALBcJ_T0074750.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131297416 131349491 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074751.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131349404 131353099 - Auts2 protein_coding retained_intron MGP_BALBcJ_T0074752.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131589972 132359804 - Auts2 protein_coding retained_intron MGP_BALBcJ_T0074753.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131848050 131851674 - Auts2 protein_coding retained_intron MGP_BALBcJ_T0074754.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131849026 132359429 - Auts2 protein_coding processed_transcript MGP_BALBcJ_T0074755.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131853956 131873360 - MGP_BALBcJ_P0074755 Auts2 protein_coding protein_coding MGP_BALBcJ_T0074756.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131854037 132265523 - MGP_BALBcJ_P0074756 Auts2 protein_coding protein_coding MGP_BALBcJ_T0074757.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 131872680 132360198 - Auts2 protein_coding retained_intron MGP_BALBcJ_T0074758.1 MGP_BALBcJ_G0030128.1 mouse_genomes_project 5 132358923 132359232 - MGP_BALBcJ_P0074758 Auts2 protein_coding protein_coding MGP_BALBcJ_T0010708.1 MGP_BALBcJ_G0008833.1 mouse_genomes_project 5 136923445 136923554 + Mir702 miRNA miRNA MGP_BALBcJ_T0071292.1 MGP_BALBcJ_G0029459.1 mouse_genomes_project 5 33352783 33380018 - MGP_BALBcJ_P0071292 Htra3 protein_coding protein_coding MGP_BALBcJ_T0071293.1 MGP_BALBcJ_G0029459.1 mouse_genomes_project 5 33352843 33379732 - MGP_BALBcJ_P0071293 Htra3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071294.1 MGP_BALBcJ_G0029459.1 mouse_genomes_project 5 33362236 33380110 - MGP_BALBcJ_P0071294 Htra3 protein_coding protein_coding MGP_BALBcJ_T0071295.1 MGP_BALBcJ_G0029459.1 mouse_genomes_project 5 33368876 33372236 - MGP_BALBcJ_P0071295 Htra3 protein_coding protein_coding MGP_BALBcJ_T0071296.1 MGP_BALBcJ_G0029459.1 mouse_genomes_project 5 33379020 33380100 - Htra3 protein_coding retained_intron MGP_BALBcJ_T0004625.1 MGP_BALBcJ_G0004006.1 mouse_genomes_project 5 19292008 19335103 + Gm10475 antisense antisense MGP_BALBcJ_T0070057.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2547103 2569377 - MGP_BALBcJ_P0070057 Gtpbp10 protein_coding protein_coding MGP_BALBcJ_T0070058.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2548861 2569362 - MGP_BALBcJ_P0070058 Gtpbp10 protein_coding protein_coding MGP_BALBcJ_T0070059.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2549091 2569352 - MGP_BALBcJ_P0070059 Gtpbp10 protein_coding protein_coding MGP_BALBcJ_T0070060.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2551542 2553832 - Gtpbp10 protein_coding retained_intron MGP_BALBcJ_T0070061.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2551562 2553087 - Gtpbp10 protein_coding retained_intron MGP_BALBcJ_T0070062.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2551979 2567081 - MGP_BALBcJ_P0070062 Gtpbp10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070063.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2553706 2569300 - MGP_BALBcJ_P0070063 Gtpbp10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070064.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2553750 2565593 - Gtpbp10 protein_coding retained_intron MGP_BALBcJ_T0070065.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2553787 2556909 - Gtpbp10 protein_coding retained_intron MGP_BALBcJ_T0070066.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2555990 2569321 - MGP_BALBcJ_P0070066 Gtpbp10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070067.1 MGP_BALBcJ_G0029254.1 mouse_genomes_project 5 2568707 2569355 - MGP_BALBcJ_P0070067 Gtpbp10 protein_coding protein_coding MGP_BALBcJ_T0008369.1 MGP_BALBcJ_G0006789.1 mouse_genomes_project 5 126983951 126984357 - Gm43476 lincRNA lincRNA MGP_BALBcJ_T0015153.1 MGP_BALBcJ_G0013250.1 mouse_genomes_project 5 138632126 138632984 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004679.1 MGP_BALBcJ_G0004048.1 mouse_genomes_project 5 50189518 50190767 + Gm43685 antisense antisense MGP_BALBcJ_T0073221.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109551784 109553142 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0073222.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109551785 109555009 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0073223.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109551827 109555977 - MGP_BALBcJ_P0073223 Gtpbp6 protein_coding protein_coding MGP_BALBcJ_T0073224.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109552714 109554983 - Gtpbp6 protein_coding processed_transcript MGP_BALBcJ_T0073225.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109553038 109555223 - MGP_BALBcJ_P0073225 Gtpbp6 protein_coding protein_coding MGP_BALBcJ_T0073226.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109553597 109554731 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0073227.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109554455 109555946 - Gtpbp6 protein_coding processed_transcript MGP_BALBcJ_T0073228.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109554507 109555413 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0073229.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109554654 109555239 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0073230.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109554842 109555517 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0073231.1 MGP_BALBcJ_G0029854.1 mouse_genomes_project 5 109554855 109555967 - Gtpbp6 protein_coding retained_intron MGP_BALBcJ_T0001876.1 MGP_BALBcJ_G0001789.1 mouse_genomes_project 5 134886086 134889102 - TEC TEC MGP_BALBcJ_T0014965.1 MGP_BALBcJ_G0013062.1 mouse_genomes_project 5 56850430 56851384 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071332.1 MGP_BALBcJ_G0029465.1 mouse_genomes_project 5 34166302 34175308 + MGP_BALBcJ_P0071332 Grpel1 protein_coding protein_coding MGP_BALBcJ_T0074108.1 MGP_BALBcJ_G0030020.1 mouse_genomes_project 5 121964929 121992377 + MGP_BALBcJ_P0074108 Hvcn1 protein_coding protein_coding MGP_BALBcJ_T0074109.1 MGP_BALBcJ_G0030020.1 mouse_genomes_project 5 121967856 122001397 + MGP_BALBcJ_P0074109 Hvcn1 protein_coding protein_coding MGP_BALBcJ_T0074110.1 MGP_BALBcJ_G0030020.1 mouse_genomes_project 5 121968036 121997607 + MGP_BALBcJ_P0074110 Hvcn1 protein_coding protein_coding MGP_BALBcJ_T0074111.1 MGP_BALBcJ_G0030020.1 mouse_genomes_project 5 121968240 121996621 + MGP_BALBcJ_P0074111 Hvcn1 protein_coding protein_coding MGP_BALBcJ_T0074112.1 MGP_BALBcJ_G0030020.1 mouse_genomes_project 5 121968261 122001397 + MGP_BALBcJ_P0074112 Hvcn1 protein_coding protein_coding MGP_BALBcJ_T0075073.1 MGP_BALBcJ_G0030182.1 mouse_genomes_project 5 136098422 136121055 - MGP_BALBcJ_P0075073 Prkrip1 protein_coding protein_coding MGP_BALBcJ_T0075074.1 MGP_BALBcJ_G0030182.1 mouse_genomes_project 5 136101372 136121002 - Prkrip1 protein_coding processed_transcript MGP_BALBcJ_T0075075.1 MGP_BALBcJ_G0030182.1 mouse_genomes_project 5 136101710 136119914 - MGP_BALBcJ_P0075075 Prkrip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075076.1 MGP_BALBcJ_G0030182.1 mouse_genomes_project 5 136101715 136121000 - MGP_BALBcJ_P0075076 Prkrip1 protein_coding protein_coding MGP_BALBcJ_T0008119.1 MGP_BALBcJ_G0006617.1 mouse_genomes_project 5 57783508 57803690 - 4933402J10Rik lincRNA lincRNA MGP_BALBcJ_T0008120.1 MGP_BALBcJ_G0006617.1 mouse_genomes_project 5 57783513 57803684 - 4933402J10Rik lincRNA lincRNA MGP_BALBcJ_T0099930.1 MGP_BALBcJ_G0037966.1 mouse_genomes_project 5 68084942 68085004 - Gm23067 snRNA snRNA MGP_BALBcJ_T0072882.1 MGP_BALBcJ_G0029772.1 mouse_genomes_project 5 100497547 100559949 + MGP_BALBcJ_P0072882 Cds1 protein_coding unknown_likely_coding MGP_BALBcJ_T0073358.1 MGP_BALBcJ_G0029877.1 mouse_genomes_project 5 111707804 111713850 - MGP_BALBcJ_P0073358 Cryba4 protein_coding protein_coding MGP_BALBcJ_T0073359.1 MGP_BALBcJ_G0029877.1 mouse_genomes_project 5 111707805 111712498 - MGP_BALBcJ_P0073359 Cryba4 protein_coding protein_coding MGP_BALBcJ_T0073360.1 MGP_BALBcJ_G0029877.1 mouse_genomes_project 5 111707844 111713138 - MGP_BALBcJ_P0073360 Cryba4 protein_coding protein_coding MGP_BALBcJ_T0001495.1 MGP_BALBcJ_G0001413.1 mouse_genomes_project 5 30068781 30071246 + TEC TEC MGP_BALBcJ_T0015139.1 MGP_BALBcJ_G0013236.1 mouse_genomes_project 5 135605242 135606162 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073619.1 MGP_BALBcJ_G0029928.1 mouse_genomes_project 5 114469672 114485070 + MGP_BALBcJ_P0073619 Oasl1 protein_coding protein_coding MGP_BALBcJ_T0073620.1 MGP_BALBcJ_G0029928.1 mouse_genomes_project 5 114469696 114485073 + MGP_BALBcJ_P0073620 Oasl1 protein_coding protein_coding MGP_BALBcJ_T0073621.1 MGP_BALBcJ_G0029928.1 mouse_genomes_project 5 114469854 114482911 + Oasl1 protein_coding processed_transcript MGP_BALBcJ_T0073622.1 MGP_BALBcJ_G0029928.1 mouse_genomes_project 5 114469867 114483003 + Oasl1 protein_coding processed_transcript MGP_BALBcJ_T0073623.1 MGP_BALBcJ_G0029928.1 mouse_genomes_project 5 114476289 114479975 + Oasl1 protein_coding retained_intron MGP_BALBcJ_T0073624.1 MGP_BALBcJ_G0029928.1 mouse_genomes_project 5 114482960 114484845 + Oasl1 protein_coding processed_transcript MGP_BALBcJ_T0014957.1 MGP_BALBcJ_G0013054.1 mouse_genomes_project 5 53456068 53456873 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073604.1 MGP_BALBcJ_G0029924.1 mouse_genomes_project 5 114338406 114339571 - MGP_BALBcJ_P0073604 2610524H06Rik protein_coding protein_coding MGP_BALBcJ_T0004635.1 MGP_BALBcJ_G0004015.1 mouse_genomes_project 5 26026169 26473968 + antisense antisense MGP_BALBcJ_T0004636.1 MGP_BALBcJ_G0004015.1 mouse_genomes_project 5 26034862 26257748 + antisense antisense MGP_BALBcJ_T0008313.1 MGP_BALBcJ_G0006754.1 mouse_genomes_project 5 118556430 118564556 + Gm43342 lincRNA lincRNA MGP_BALBcJ_T0098985.1 MGP_BALBcJ_G0037030.1 mouse_genomes_project 5 144537525 144540649 + Dmrt1i sense_intronic sense_intronic MGP_BALBcJ_T0098986.1 MGP_BALBcJ_G0037030.1 mouse_genomes_project 5 144538127 144540606 + Dmrt1i sense_intronic sense_intronic MGP_BALBcJ_T0098987.1 MGP_BALBcJ_G0037030.1 mouse_genomes_project 5 144538127 144540606 + Dmrt1i sense_intronic sense_intronic MGP_BALBcJ_T0015008.1 MGP_BALBcJ_G0013105.1 mouse_genomes_project 5 73309484 73310874 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014986.1 MGP_BALBcJ_G0013083.1 mouse_genomes_project 5 62134138 62134794 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102590.1 MGP_BALBcJ_G0040406.1 mouse_genomes_project 5 149368543 149368766 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008298.1 MGP_BALBcJ_G0006742.1 mouse_genomes_project 5 115208893 115209661 - 1110006O24Rik lincRNA lincRNA MGP_BALBcJ_T0070362.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20894639 20964488 + MGP_BALBcJ_P0070362 Kmt2e protein_coding protein_coding MGP_BALBcJ_T0070363.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20894639 20947091 + MGP_BALBcJ_P0070363 Kmt2e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070364.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20894647 20964488 + MGP_BALBcJ_P0070364 Kmt2e protein_coding protein_coding MGP_BALBcJ_T0070365.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20939079 20946142 + Kmt2e protein_coding processed_transcript MGP_BALBcJ_T0070366.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20946191 20956402 + MGP_BALBcJ_P0070366 Kmt2e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070367.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20946239 20963118 + MGP_BALBcJ_P0070367 Kmt2e protein_coding protein_coding MGP_BALBcJ_T0070368.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20953072 20960674 + MGP_BALBcJ_P0070368 Kmt2e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070369.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20953609 20956552 + Kmt2e protein_coding retained_intron MGP_BALBcJ_T0070370.1 MGP_BALBcJ_G0029306.1 mouse_genomes_project 5 20958465 20960717 + MGP_BALBcJ_P0070370 Kmt2e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073603.1 MGP_BALBcJ_G0029923.1 mouse_genomes_project 5 114320818 114339563 - MGP_BALBcJ_P0073603 Gm20499 protein_coding protein_coding MGP_BALBcJ_T0071633.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46010014 46054674 + 5730480H06Rik protein_coding processed_transcript MGP_BALBcJ_T0071634.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46046791 46063306 + MGP_BALBcJ_P0071634 5730480H06Rik protein_coding protein_coding MGP_BALBcJ_T0071635.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46046791 46063306 + MGP_BALBcJ_P0071635 5730480H06Rik protein_coding protein_coding MGP_BALBcJ_T0071636.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46046895 46063307 + MGP_BALBcJ_P0071636 5730480H06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071637.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46048902 46070078 + MGP_BALBcJ_P0071637 5730480H06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071638.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46054587 46063017 + 5730480H06Rik protein_coding retained_intron MGP_BALBcJ_T0071646.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46067297 46072702 + 5730480H06Rik protein_coding retained_intron MGP_BALBcJ_T0071647.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46070037 46088721 + 5730480H06Rik protein_coding retained_intron MGP_BALBcJ_T0071649.1 MGP_BALBcJ_G0029516.1 mouse_genomes_project 5 46071124 46088750 + 5730480H06Rik protein_coding processed_transcript MGP_BALBcJ_T0075021.1 MGP_BALBcJ_G0030173.1 mouse_genomes_project 5 135898141 135906532 + MGP_BALBcJ_P0075021 Zp3 protein_coding protein_coding MGP_BALBcJ_T0075022.1 MGP_BALBcJ_G0030173.1 mouse_genomes_project 5 135898210 135905200 + MGP_BALBcJ_P0075022 Zp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0001666.1 MGP_BALBcJ_G0001582.1 mouse_genomes_project 5 65902434 65906129 + TEC TEC MGP_BALBcJ_T0004686.1 MGP_BALBcJ_G0004055.1 mouse_genomes_project 5 64100676 64125103 - 1700126H18Rik antisense antisense MGP_BALBcJ_T0075323.1 MGP_BALBcJ_G0030229.1 mouse_genomes_project 5 137956009 137965409 + MGP_BALBcJ_P0075323 Azgp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075324.1 MGP_BALBcJ_G0030229.1 mouse_genomes_project 5 137956028 137965409 + MGP_BALBcJ_P0075324 Azgp1 protein_coding protein_coding MGP_BALBcJ_T0075325.1 MGP_BALBcJ_G0030229.1 mouse_genomes_project 5 137956057 137960722 + Azgp1 protein_coding retained_intron MGP_BALBcJ_T0075330.1 MGP_BALBcJ_G0030234.1 mouse_genomes_project 5 137995691 138022665 + MGP_BALBcJ_P0075330 protein_coding protein_coding MGP_BALBcJ_T0001889.1 MGP_BALBcJ_G0001802.1 mouse_genomes_project 5 141455034 141455715 - TEC TEC MGP_BALBcJ_T0072968.1 MGP_BALBcJ_G0029797.1 mouse_genomes_project 5 103856454 104020833 - MGP_BALBcJ_P0072968 protein_coding protein_coding MGP_BALBcJ_T0072691.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91018320 91308351 + MGP_BALBcJ_P0072691 Shroom3 protein_coding protein_coding MGP_BALBcJ_T0072692.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91018510 91307801 + MGP_BALBcJ_P0072692 Shroom3 protein_coding protein_coding MGP_BALBcJ_T0072693.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91142804 91148892 + Shroom3 protein_coding processed_transcript MGP_BALBcJ_T0072694.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91148873 91175524 + Shroom3 protein_coding processed_transcript MGP_BALBcJ_T0072695.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91257208 91307763 + MGP_BALBcJ_P0072695 Shroom3 protein_coding protein_coding MGP_BALBcJ_T0072696.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91268472 91283540 + MGP_BALBcJ_P0072696 Shroom3 protein_coding protein_coding MGP_BALBcJ_T0072697.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91281709 91285332 + Shroom3 protein_coding retained_intron MGP_BALBcJ_T0072698.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91290907 91291818 + Shroom3 protein_coding retained_intron MGP_BALBcJ_T0072699.1 MGP_BALBcJ_G0029732.1 mouse_genomes_project 5 91305118 91307829 + Shroom3 protein_coding retained_intron MGP_BALBcJ_T0001839.1 MGP_BALBcJ_G0001753.1 mouse_genomes_project 5 130040982 130042277 + TEC TEC MGP_BALBcJ_T0073596.1 MGP_BALBcJ_G0029921.1 mouse_genomes_project 5 114286251 114317598 + MGP_BALBcJ_P0073596 Ankrd13a protein_coding protein_coding MGP_BALBcJ_T0073597.1 MGP_BALBcJ_G0029921.1 mouse_genomes_project 5 114286519 114317979 + Ankrd13a protein_coding processed_transcript MGP_BALBcJ_T0073598.1 MGP_BALBcJ_G0029921.1 mouse_genomes_project 5 114297558 114315387 + MGP_BALBcJ_P0073598 Ankrd13a protein_coding protein_coding MGP_BALBcJ_T0073599.1 MGP_BALBcJ_G0029921.1 mouse_genomes_project 5 114307257 114317979 + Ankrd13a protein_coding processed_transcript MGP_BALBcJ_T0073600.1 MGP_BALBcJ_G0029921.1 mouse_genomes_project 5 114311232 114317979 + Ankrd13a protein_coding processed_transcript MGP_BALBcJ_T0073601.1 MGP_BALBcJ_G0029921.1 mouse_genomes_project 5 114311346 114313339 + Ankrd13a protein_coding retained_intron MGP_BALBcJ_T0070414.1 MGP_BALBcJ_G0029314.1 mouse_genomes_project 5 21804981 21837414 - MGP_BALBcJ_P0070414 Kcnh2 protein_coding protein_coding MGP_BALBcJ_T0070415.1 MGP_BALBcJ_G0029314.1 mouse_genomes_project 5 21804981 21814961 - MGP_BALBcJ_P0070415 Kcnh2 protein_coding protein_coding MGP_BALBcJ_T0070416.1 MGP_BALBcJ_G0029314.1 mouse_genomes_project 5 21805475 21807647 - Kcnh2 protein_coding processed_transcript MGP_BALBcJ_T0070417.1 MGP_BALBcJ_G0029314.1 mouse_genomes_project 5 21809875 21811175 - Kcnh2 protein_coding processed_transcript MGP_BALBcJ_T0070418.1 MGP_BALBcJ_G0029314.1 mouse_genomes_project 5 21810833 21811905 - Kcnh2 protein_coding processed_transcript MGP_BALBcJ_T0074285.1 MGP_BALBcJ_G0030046.1 mouse_genomes_project 5 123180611 123238401 + MGP_BALBcJ_P0074285 Mlxip protein_coding protein_coding MGP_BALBcJ_T0074286.1 MGP_BALBcJ_G0030046.1 mouse_genomes_project 5 123180613 123251959 + MGP_BALBcJ_P0074286 Mlxip protein_coding protein_coding MGP_BALBcJ_T0074287.1 MGP_BALBcJ_G0030046.1 mouse_genomes_project 5 123236204 123251956 + MGP_BALBcJ_P0074287 Mlxip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074288.1 MGP_BALBcJ_G0030046.1 mouse_genomes_project 5 123243124 123247568 + Mlxip protein_coding processed_transcript MGP_BALBcJ_T0070571.1 MGP_BALBcJ_G0029346.1 mouse_genomes_project 5 25740487 25747234 + MGP_BALBcJ_P0070571 En2 protein_coding protein_coding MGP_BALBcJ_T0004608.1 MGP_BALBcJ_G0003992.1 mouse_genomes_project 5 402246 409510 - Gm17590 antisense antisense MGP_BALBcJ_T0004609.1 MGP_BALBcJ_G0003992.1 mouse_genomes_project 5 402456 402564 - Gm17590 antisense antisense MGP_BALBcJ_T0072155.1 MGP_BALBcJ_G0029607.1 mouse_genomes_project 5 71963639 72034029 - MGP_BALBcJ_P0072155 Usp46 protein_coding protein_coding MGP_BALBcJ_T0072156.1 MGP_BALBcJ_G0029607.1 mouse_genomes_project 5 71963910 72034040 - MGP_BALBcJ_P0072156 Usp46 protein_coding protein_coding MGP_BALBcJ_T0072157.1 MGP_BALBcJ_G0029607.1 mouse_genomes_project 5 71966997 72001373 - Usp46 protein_coding processed_transcript MGP_BALBcJ_T0072158.1 MGP_BALBcJ_G0029607.1 mouse_genomes_project 5 71991937 71995014 - MGP_BALBcJ_P0072158 Usp46 protein_coding protein_coding MGP_BALBcJ_T0072159.1 MGP_BALBcJ_G0029607.1 mouse_genomes_project 5 71994915 71998211 - Usp46 protein_coding retained_intron MGP_BALBcJ_T0072160.1 MGP_BALBcJ_G0029607.1 mouse_genomes_project 5 71994961 72031357 - MGP_BALBcJ_P0072160 Usp46 protein_coding protein_coding MGP_BALBcJ_T0072043.1 MGP_BALBcJ_G0029586.1 mouse_genomes_project 5 69549486 69997953 + MGP_BALBcJ_P0072043 Gabrb1 protein_coding protein_coding MGP_BALBcJ_T0072044.1 MGP_BALBcJ_G0029586.1 mouse_genomes_project 5 69589160 70028663 + MGP_BALBcJ_P0072044 Gabrb1 protein_coding protein_coding MGP_BALBcJ_T0071426.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35812880 35835593 - MGP_BALBcJ_P0071426 Nsg1 protein_coding protein_coding MGP_BALBcJ_T0071427.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35813823 35814518 - MGP_BALBcJ_P0071427 Nsg1 protein_coding protein_coding MGP_BALBcJ_T0071428.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35813944 35834717 - MGP_BALBcJ_P0071428 Nsg1 protein_coding protein_coding MGP_BALBcJ_T0071429.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35814231 35835091 - MGP_BALBcJ_P0071429 Nsg1 protein_coding protein_coding MGP_BALBcJ_T0071430.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35820402 35835048 - MGP_BALBcJ_P0071430 Nsg1 protein_coding protein_coding MGP_BALBcJ_T0071431.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35831019 35835159 - Nsg1 protein_coding retained_intron MGP_BALBcJ_T0071432.1 MGP_BALBcJ_G0029483.1 mouse_genomes_project 5 35834591 35835091 - MGP_BALBcJ_P0071432 Nsg1 protein_coding protein_coding MGP_BALBcJ_T0001460.1 MGP_BALBcJ_G0001381.1 mouse_genomes_project 5 13169900 13171081 + TEC TEC MGP_BALBcJ_T0071279.1 MGP_BALBcJ_G0029457.1 mouse_genomes_project 5 33257734 33275581 - MGP_BALBcJ_P0071279 Trmt44 protein_coding protein_coding MGP_BALBcJ_T0071280.1 MGP_BALBcJ_G0029457.1 mouse_genomes_project 5 33273002 33275562 - Trmt44 protein_coding retained_intron MGP_BALBcJ_T0071281.1 MGP_BALBcJ_G0029457.1 mouse_genomes_project 5 33273254 33275185 - MGP_BALBcJ_P0071281 Trmt44 protein_coding protein_coding MGP_BALBcJ_T0014844.1 MGP_BALBcJ_G0012941.1 mouse_genomes_project 5 11222918 11223882 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014914.1 MGP_BALBcJ_G0013011.1 mouse_genomes_project 5 30799404 30799864 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008160.1 MGP_BALBcJ_G0006648.1 mouse_genomes_project 5 75005846 75018255 - 1700112J05Rik lincRNA lincRNA MGP_BALBcJ_T0070530.1 MGP_BALBcJ_G0029336.1 mouse_genomes_project 5 22715639 22719649 + Galnt11 protein_coding processed_transcript MGP_BALBcJ_T0070532.1 MGP_BALBcJ_G0029336.1 mouse_genomes_project 5 22716617 22751126 + MGP_BALBcJ_P0070532 Galnt11 protein_coding protein_coding MGP_BALBcJ_T0070533.1 MGP_BALBcJ_G0029336.1 mouse_genomes_project 5 22731592 22751125 + MGP_BALBcJ_P0070533 Galnt11 protein_coding protein_coding MGP_BALBcJ_T0070534.1 MGP_BALBcJ_G0029336.1 mouse_genomes_project 5 22732002 22734125 + MGP_BALBcJ_P0070534 Galnt11 protein_coding protein_coding MGP_BALBcJ_T0070535.1 MGP_BALBcJ_G0029336.1 mouse_genomes_project 5 22732582 22751126 + MGP_BALBcJ_P0070535 Galnt11 protein_coding protein_coding MGP_BALBcJ_T0015189.1 MGP_BALBcJ_G0013286.1 mouse_genomes_project 5 148269021 148269496 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014922.1 MGP_BALBcJ_G0013019.1 mouse_genomes_project 5 32175488 32176097 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072248.1 MGP_BALBcJ_G0029623.1 mouse_genomes_project 5 74587717 74644089 + Cep135 protein_coding retained_intron MGP_BALBcJ_T0072249.1 MGP_BALBcJ_G0029623.1 mouse_genomes_project 5 74587720 74645647 + MGP_BALBcJ_P0072249 Cep135 protein_coding protein_coding MGP_BALBcJ_T0072250.1 MGP_BALBcJ_G0029623.1 mouse_genomes_project 5 74590733 74645646 + MGP_BALBcJ_P0072250 Cep135 protein_coding protein_coding MGP_BALBcJ_T0008191.1 MGP_BALBcJ_G0006676.1 mouse_genomes_project 5 95988794 96011067 + Gm33969 lincRNA lincRNA MGP_BALBcJ_T0099924.1 MGP_BALBcJ_G0037960.1 mouse_genomes_project 5 58320344 58320452 - Gm23331 snRNA snRNA MGP_BALBcJ_T0015115.1 MGP_BALBcJ_G0013212.1 mouse_genomes_project 5 114854048 114854186 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072930.1 MGP_BALBcJ_G0029781.1 mouse_genomes_project 5 102706370 102728055 - MGP_BALBcJ_P0072930 Hsd17b13 protein_coding protein_coding MGP_BALBcJ_T0072931.1 MGP_BALBcJ_G0029781.1 mouse_genomes_project 5 102714286 102728101 - MGP_BALBcJ_P0072931 Hsd17b13 protein_coding protein_coding MGP_BALBcJ_T0072932.1 MGP_BALBcJ_G0029781.1 mouse_genomes_project 5 102714286 102728017 - MGP_BALBcJ_P0072932 Hsd17b13 protein_coding protein_coding MGP_BALBcJ_T0072735.1 MGP_BALBcJ_G0029741.1 mouse_genomes_project 5 95031111 95437130 + MGP_BALBcJ_P0072735 Fras1 protein_coding protein_coding MGP_BALBcJ_T0072736.1 MGP_BALBcJ_G0029741.1 mouse_genomes_project 5 95031362 95199199 + Fras1 protein_coding retained_intron MGP_BALBcJ_T0072737.1 MGP_BALBcJ_G0029741.1 mouse_genomes_project 5 95031591 95044793 + Fras1 protein_coding retained_intron MGP_BALBcJ_T0072738.1 MGP_BALBcJ_G0029741.1 mouse_genomes_project 5 95266875 95288715 + Fras1 protein_coding processed_transcript MGP_BALBcJ_T0072739.1 MGP_BALBcJ_G0029741.1 mouse_genomes_project 5 95267092 95288827 + Fras1 protein_coding processed_transcript MGP_BALBcJ_T0072740.1 MGP_BALBcJ_G0029741.1 mouse_genomes_project 5 95280584 95288715 + Fras1 protein_coding processed_transcript MGP_BALBcJ_T0071737.1 MGP_BALBcJ_G0029534.1 mouse_genomes_project 5 51694655 51818646 + MGP_BALBcJ_P0071737 Stim2 protein_coding protein_coding MGP_BALBcJ_T0071738.1 MGP_BALBcJ_G0029534.1 mouse_genomes_project 5 51695009 51816338 + MGP_BALBcJ_P0071738 Stim2 protein_coding protein_coding MGP_BALBcJ_T0071739.1 MGP_BALBcJ_G0029534.1 mouse_genomes_project 5 51771835 51802039 + Stim2 protein_coding processed_transcript MGP_BALBcJ_T0071740.1 MGP_BALBcJ_G0029534.1 mouse_genomes_project 5 51813445 51816176 + Stim2 protein_coding retained_intron MGP_BALBcJ_T0001544.1 MGP_BALBcJ_G0001462.1 mouse_genomes_project 5 43349385 43351415 + TEC TEC MGP_BALBcJ_T0001893.1 MGP_BALBcJ_G0001806.1 mouse_genomes_project 5 143594871 143597187 - TEC TEC MGP_BALBcJ_T0074429.1 MGP_BALBcJ_G0030068.1 mouse_genomes_project 5 124133085 124145088 + MGP_BALBcJ_P0074429 2810006K23Rik protein_coding protein_coding MGP_BALBcJ_T0074430.1 MGP_BALBcJ_G0030068.1 mouse_genomes_project 5 124133094 124146800 + MGP_BALBcJ_P0074430 2810006K23Rik protein_coding protein_coding MGP_BALBcJ_T0071801.1 MGP_BALBcJ_G0029549.1 mouse_genomes_project 5 63035899 63072928 + MGP_BALBcJ_P0071801 Klhl5 protein_coding protein_coding MGP_BALBcJ_T0071802.1 MGP_BALBcJ_G0029549.1 mouse_genomes_project 5 63035975 63038406 + Klhl5 protein_coding retained_intron MGP_BALBcJ_T0071803.1 MGP_BALBcJ_G0029549.1 mouse_genomes_project 5 63036220 63071813 + MGP_BALBcJ_P0071803 Klhl5 protein_coding protein_coding MGP_BALBcJ_T0071804.1 MGP_BALBcJ_G0029549.1 mouse_genomes_project 5 63036226 63039356 + Klhl5 protein_coding processed_transcript MGP_BALBcJ_T0071805.1 MGP_BALBcJ_G0029549.1 mouse_genomes_project 5 63036494 63058428 + Klhl5 protein_coding processed_transcript MGP_BALBcJ_T0071806.1 MGP_BALBcJ_G0029549.1 mouse_genomes_project 5 63060863 63072928 + MGP_BALBcJ_P0071806 Klhl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004649.1 MGP_BALBcJ_G0004026.1 mouse_genomes_project 5 32345069 32346829 + Gm15522 antisense antisense MGP_BALBcJ_T0001641.1 MGP_BALBcJ_G0001557.1 mouse_genomes_project 5 63788304 63789012 + TEC TEC MGP_BALBcJ_T0072298.1 MGP_BALBcJ_G0029629.1 mouse_genomes_project 5 75003454 75008870 + MGP_BALBcJ_P0072298 Arl9 protein_coding protein_coding MGP_BALBcJ_T0072299.1 MGP_BALBcJ_G0029629.1 mouse_genomes_project 5 75005869 75009998 + MGP_BALBcJ_P0072299 Arl9 protein_coding protein_coding MGP_BALBcJ_T0073217.1 MGP_BALBcJ_G0029853.1 mouse_genomes_project 5 109547813 109551622 + MGP_BALBcJ_P0073217 Plcxd1 protein_coding protein_coding MGP_BALBcJ_T0073218.1 MGP_BALBcJ_G0029853.1 mouse_genomes_project 5 109548266 109549686 + MGP_BALBcJ_P0073218 Plcxd1 protein_coding protein_coding MGP_BALBcJ_T0073219.1 MGP_BALBcJ_G0029853.1 mouse_genomes_project 5 109548403 109553755 + MGP_BALBcJ_P0073219 Plcxd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073220.1 MGP_BALBcJ_G0029853.1 mouse_genomes_project 5 109549010 109553760 + Plcxd1 protein_coding processed_transcript MGP_BALBcJ_T0075445.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139106207 139226392 - MGP_BALBcJ_P0075445 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075446.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139107564 139112709 - Prkar1b protein_coding processed_transcript MGP_BALBcJ_T0075447.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139131687 139218822 - MGP_BALBcJ_P0075447 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075448.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139139898 139226822 - MGP_BALBcJ_P0075448 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075449.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139152160 139203724 - MGP_BALBcJ_P0075449 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075450.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139199563 139227239 - MGP_BALBcJ_P0075450 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075451.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139199590 139246482 - MGP_BALBcJ_P0075451 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075452.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139199656 139227046 - MGP_BALBcJ_P0075452 Prkar1b protein_coding protein_coding MGP_BALBcJ_T0075453.1 MGP_BALBcJ_G0030261.1 mouse_genomes_project 5 139244534 139246438 - Prkar1b protein_coding processed_transcript MGP_BALBcJ_T0004716.1 MGP_BALBcJ_G0004080.1 mouse_genomes_project 5 89398033 89416560 - Gm42532 antisense antisense MGP_BALBcJ_T0008438.1 MGP_BALBcJ_G0006842.1 mouse_genomes_project 5 149578646 149580020 + Gm42787 lincRNA lincRNA MGP_BALBcJ_T0001612.1 MGP_BALBcJ_G0001529.1 mouse_genomes_project 5 55776010 55777065 + TEC TEC MGP_BALBcJ_T0008386.1 MGP_BALBcJ_G0006799.1 mouse_genomes_project 5 133361298 133419918 - Gm42624 lincRNA lincRNA MGP_BALBcJ_T0074805.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199738 134301700 - MGP_BALBcJ_P0074805 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074806.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199738 134301240 - MGP_BALBcJ_P0074806 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074807.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199743 134301672 - MGP_BALBcJ_P0074807 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074808.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199745 134205549 - MGP_BALBcJ_P0074808 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074809.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199751 134301700 - MGP_BALBcJ_P0074809 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074810.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199761 134301560 - MGP_BALBcJ_P0074810 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074811.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199761 134301568 - MGP_BALBcJ_P0074811 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074812.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199761 134301560 - MGP_BALBcJ_P0074812 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074813.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199779 134301573 - MGP_BALBcJ_P0074813 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074814.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134199868 134220198 - MGP_BALBcJ_P0074814 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074815.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134200655 134301573 - MGP_BALBcJ_P0074815 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074816.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134200655 134301560 - MGP_BALBcJ_P0074816 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074817.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134200717 134301676 - MGP_BALBcJ_P0074817 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074818.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134200736 134301570 - MGP_BALBcJ_P0074818 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074819.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134200905 134270958 - MGP_BALBcJ_P0074819 Gtf2ird1 protein_coding unknown_likely_coding MGP_BALBcJ_T0074820.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134203036 134228238 - MGP_BALBcJ_P0074820 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074821.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134203065 134271229 - MGP_BALBcJ_P0074821 Gtf2ird1 protein_coding unknown_likely_coding MGP_BALBcJ_T0074822.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134204593 134220252 - Gtf2ird1 protein_coding retained_intron MGP_BALBcJ_T0074823.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134205606 134231632 - MGP_BALBcJ_P0074823 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074824.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134207181 134231653 - MGP_BALBcJ_P0074824 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074825.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134218647 134301261 - Gtf2ird1 protein_coding retained_intron MGP_BALBcJ_T0074826.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134225749 134239195 - MGP_BALBcJ_P0074826 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074827.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134225749 134239195 - MGP_BALBcJ_P0074827 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074828.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134225958 134227669 - Gtf2ird1 protein_coding retained_intron MGP_BALBcJ_T0074829.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134225961 134239195 - MGP_BALBcJ_P0074829 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074830.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134226945 134239195 - MGP_BALBcJ_P0074830 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074831.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134227986 134239099 - Gtf2ird1 protein_coding retained_intron MGP_BALBcJ_T0074832.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134228102 134245587 - Gtf2ird1 protein_coding retained_intron MGP_BALBcJ_T0074833.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134234399 134258895 - MGP_BALBcJ_P0074833 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0074834.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134246301 134301663 - Gtf2ird1 protein_coding retained_intron MGP_BALBcJ_T0074835.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134248194 134301658 - Gtf2ird1 protein_coding processed_transcript MGP_BALBcJ_T0074836.1 MGP_BALBcJ_G0030134.1 mouse_genomes_project 5 134254475 134300935 - MGP_BALBcJ_P0074836 Gtf2ird1 protein_coding protein_coding MGP_BALBcJ_T0001732.1 MGP_BALBcJ_G0001647.1 mouse_genomes_project 5 101719698 101722170 - TEC TEC MGP_BALBcJ_T0014826.1 MGP_BALBcJ_G0012923.1 mouse_genomes_project 5 3757555 3758121 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004781.1 MGP_BALBcJ_G0004126.1 mouse_genomes_project 5 119207419 119212239 - Tbx3os1 antisense antisense MGP_BALBcJ_T0004782.1 MGP_BALBcJ_G0004126.1 mouse_genomes_project 5 119207422 119266704 - Tbx3os1 antisense antisense MGP_BALBcJ_T0004783.1 MGP_BALBcJ_G0004126.1 mouse_genomes_project 5 119207514 119208056 - Tbx3os1 antisense antisense MGP_BALBcJ_T0004784.1 MGP_BALBcJ_G0004126.1 mouse_genomes_project 5 119249262 119266781 - Tbx3os1 antisense antisense MGP_BALBcJ_T0004785.1 MGP_BALBcJ_G0004126.1 mouse_genomes_project 5 119249899 119266992 - Tbx3os1 antisense antisense MGP_BALBcJ_T0004786.1 MGP_BALBcJ_G0004126.1 mouse_genomes_project 5 119256761 119313834 - Tbx3os1 antisense antisense MGP_BALBcJ_T0075242.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137538385 137544691 - Pcolce protein_coding retained_intron MGP_BALBcJ_T0075243.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137538385 137544770 - MGP_BALBcJ_P0075243 Pcolce protein_coding protein_coding MGP_BALBcJ_T0075244.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137538387 137539081 - Pcolce protein_coding retained_intron MGP_BALBcJ_T0075245.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137538387 137543757 - MGP_BALBcJ_P0075245 Pcolce protein_coding protein_coding MGP_BALBcJ_T0075246.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137538390 137544659 - MGP_BALBcJ_P0075246 Pcolce protein_coding protein_coding MGP_BALBcJ_T0075247.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137540300 137541475 - Pcolce protein_coding retained_intron MGP_BALBcJ_T0075248.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137540367 137544626 - Pcolce protein_coding processed_transcript MGP_BALBcJ_T0075249.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137540716 137543985 - MGP_BALBcJ_P0075249 Pcolce protein_coding protein_coding MGP_BALBcJ_T0075250.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137540792 137547045 - MGP_BALBcJ_P0075250 Pcolce protein_coding protein_coding MGP_BALBcJ_T0075251.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137540792 137547067 - MGP_BALBcJ_P0075251 Pcolce protein_coding protein_coding MGP_BALBcJ_T0075252.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137541003 137544602 - Pcolce protein_coding retained_intron MGP_BALBcJ_T0075253.1 MGP_BALBcJ_G0030212.1 mouse_genomes_project 5 137542221 137544609 - Pcolce protein_coding processed_transcript MGP_BALBcJ_T0075476.1 MGP_BALBcJ_G0030264.1 mouse_genomes_project 5 139352308 139370249 + MGP_BALBcJ_P0075476 Get4 protein_coding protein_coding MGP_BALBcJ_T0075477.1 MGP_BALBcJ_G0030264.1 mouse_genomes_project 5 139352354 139367113 + MGP_BALBcJ_P0075477 Get4 protein_coding protein_coding MGP_BALBcJ_T0075478.1 MGP_BALBcJ_G0030264.1 mouse_genomes_project 5 139353495 139369516 + MGP_BALBcJ_P0075478 Get4 protein_coding protein_coding MGP_BALBcJ_T0075479.1 MGP_BALBcJ_G0030264.1 mouse_genomes_project 5 139366838 139367410 + Get4 protein_coding retained_intron MGP_BALBcJ_T0075480.1 MGP_BALBcJ_G0030264.1 mouse_genomes_project 5 139366902 139369889 + Get4 protein_coding retained_intron MGP_BALBcJ_T0008174.1 MGP_BALBcJ_G0006659.1 mouse_genomes_project 5 86173116 86178489 + BC037156 lincRNA lincRNA MGP_BALBcJ_T0004794.1 MGP_BALBcJ_G0004133.1 mouse_genomes_project 5 121110132 121111704 + Gm42918 antisense antisense MGP_BALBcJ_T0072477.1 MGP_BALBcJ_G0029672.1 mouse_genomes_project 5 86238350 86241762 + MGP_BALBcJ_P0072477 2310003L06Rik protein_coding protein_coding MGP_BALBcJ_T0070484.1 MGP_BALBcJ_G0029326.1 mouse_genomes_project 5 22033271 22045219 - MGP_BALBcJ_P0070484 4931409K22Rik protein_coding protein_coding MGP_BALBcJ_T0070485.1 MGP_BALBcJ_G0029326.1 mouse_genomes_project 5 22033271 22045219 - MGP_BALBcJ_P0070485 4931409K22Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070486.1 MGP_BALBcJ_G0029326.1 mouse_genomes_project 5 22033287 22042443 - 4931409K22Rik protein_coding retained_intron MGP_BALBcJ_T0070487.1 MGP_BALBcJ_G0029326.1 mouse_genomes_project 5 22042444 22045278 - MGP_BALBcJ_P0070487 4931409K22Rik protein_coding protein_coding MGP_BALBcJ_T0070488.1 MGP_BALBcJ_G0029326.1 mouse_genomes_project 5 22042453 22046618 - 4931409K22Rik protein_coding processed_transcript MGP_BALBcJ_T0073908.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120257553 120275548 - MGP_BALBcJ_P0073908 Rita1 protein_coding protein_coding MGP_BALBcJ_T0073909.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120265383 120274846 - MGP_BALBcJ_P0073909 Rita1 protein_coding protein_coding MGP_BALBcJ_T0073910.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120265384 120268946 - Rita1 protein_coding processed_transcript MGP_BALBcJ_T0073911.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120270264 120275798 - Rita1 protein_coding processed_transcript MGP_BALBcJ_T0073912.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120272276 120275798 - MGP_BALBcJ_P0073912 Rita1 protein_coding protein_coding MGP_BALBcJ_T0073913.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120272276 120275798 - MGP_BALBcJ_P0073913 Rita1 protein_coding protein_coding MGP_BALBcJ_T0073914.1 MGP_BALBcJ_G0029983.1 mouse_genomes_project 5 120273129 120275779 - MGP_BALBcJ_P0073914 Rita1 protein_coding protein_coding MGP_BALBcJ_T0072030.1 MGP_BALBcJ_G0029583.1 mouse_genomes_project 5 68849266 68996532 - MGP_BALBcJ_P0072030 Gabra2 protein_coding protein_coding MGP_BALBcJ_T0072031.1 MGP_BALBcJ_G0029583.1 mouse_genomes_project 5 68851146 68996492 - MGP_BALBcJ_P0072031 Gabra2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072032.1 MGP_BALBcJ_G0029583.1 mouse_genomes_project 5 68852630 68913461 - Gabra2 protein_coding retained_intron MGP_BALBcJ_T0072033.1 MGP_BALBcJ_G0029583.1 mouse_genomes_project 5 68852736 68995345 - MGP_BALBcJ_P0072033 Gabra2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072034.1 MGP_BALBcJ_G0029583.1 mouse_genomes_project 5 68872109 68995905 - Gabra2 protein_coding processed_transcript MGP_BALBcJ_T0072035.1 MGP_BALBcJ_G0029583.1 mouse_genomes_project 5 68992454 68995570 - Gabra2 protein_coding retained_intron MGP_BALBcJ_T0098377.1 MGP_BALBcJ_G0036431.1 mouse_genomes_project 5 115615713 115615884 - pseudogene pseudogene MGP_BALBcJ_T0071275.1 MGP_BALBcJ_G0029455.1 mouse_genomes_project 5 33091683 33102468 + MGP_BALBcJ_P0071275 Hmx1 protein_coding protein_coding MGP_BALBcJ_T0071276.1 MGP_BALBcJ_G0029455.1 mouse_genomes_project 5 33091692 33095466 + MGP_BALBcJ_P0071276 Hmx1 protein_coding protein_coding MGP_BALBcJ_T0076083.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017227 151025892 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076084.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017227 151065839 + MGP_BALBcJ_P0076084 Brca2 protein_coding protein_coding MGP_BALBcJ_T0076085.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017229 151033030 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076086.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017229 151035802 + MGP_BALBcJ_P0076086 Brca2 protein_coding protein_coding MGP_BALBcJ_T0076087.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017241 151065840 + MGP_BALBcJ_P0076087 Brca2 protein_coding protein_coding MGP_BALBcJ_T0076088.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017287 151021282 + Brca2 protein_coding processed_transcript MGP_BALBcJ_T0076089.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151017810 151063874 + MGP_BALBcJ_P0076089 Brca2 protein_coding unknown_likely_coding MGP_BALBcJ_T0076090.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151025236 151028454 + Brca2 protein_coding processed_transcript MGP_BALBcJ_T0076091.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151048508 151050743 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076092.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151050018 151052937 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076093.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151052605 151053292 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076094.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151053007 151056126 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076095.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151062637 151065839 + Brca2 protein_coding processed_transcript MGP_BALBcJ_T0076096.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151062918 151065425 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0076097.1 MGP_BALBcJ_G0030392.1 mouse_genomes_project 5 151064680 151066422 + Brca2 protein_coding retained_intron MGP_BALBcJ_T0008054.1 MGP_BALBcJ_G0006569.1 mouse_genomes_project 5 26926695 26938377 + 4632411P08Rik lincRNA lincRNA MGP_BALBcJ_T0071402.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34979650 35018141 - MGP_BALBcJ_P0071402 Evc protein_coding protein_coding MGP_BALBcJ_T0071403.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34980207 34987809 - MGP_BALBcJ_P0071403 Evc protein_coding protein_coding MGP_BALBcJ_T0071404.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34980924 34992942 - Evc protein_coding retained_intron MGP_BALBcJ_T0071405.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34980969 34982099 - MGP_BALBcJ_P0071405 Evc protein_coding protein_coding MGP_BALBcJ_T0071406.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34993846 35018214 - MGP_BALBcJ_P0071406 Evc protein_coding protein_coding MGP_BALBcJ_T0071407.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34995096 34998893 - Evc protein_coding retained_intron MGP_BALBcJ_T0071408.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34996732 34999012 - Evc protein_coding retained_intron MGP_BALBcJ_T0071409.1 MGP_BALBcJ_G0029477.1 mouse_genomes_project 5 34999705 35018226 - Evc protein_coding retained_intron MGP_BALBcJ_T0071433.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35865342 35881783 - Zbtb49 protein_coding processed_transcript MGP_BALBcJ_T0071434.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35875681 35896052 - MGP_BALBcJ_P0071434 Zbtb49 protein_coding protein_coding MGP_BALBcJ_T0071435.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35875846 35896008 - MGP_BALBcJ_P0071435 Zbtb49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071436.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35875849 35896020 - MGP_BALBcJ_P0071436 Zbtb49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071437.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35876234 35896020 - MGP_BALBcJ_P0071437 Zbtb49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071438.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35876234 35896022 - MGP_BALBcJ_P0071438 Zbtb49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071439.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35878847 35879397 - MGP_BALBcJ_P0071439 Zbtb49 protein_coding protein_coding MGP_BALBcJ_T0071440.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35879348 35889147 - MGP_BALBcJ_P0071440 Zbtb49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071441.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35879404 35896026 - MGP_BALBcJ_P0071441 Zbtb49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071442.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35887632 35896049 - MGP_BALBcJ_P0071442 Zbtb49 protein_coding protein_coding MGP_BALBcJ_T0071443.1 MGP_BALBcJ_G0029484.1 mouse_genomes_project 5 35890973 35896019 - Zbtb49 protein_coding retained_intron MGP_BALBcJ_T0004634.1 MGP_BALBcJ_G0004014.1 mouse_genomes_project 5 25077598 25078923 - Gm16058 antisense antisense MGP_BALBcJ_T0015095.1 MGP_BALBcJ_G0013192.1 mouse_genomes_project 5 108726054 108728069 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073953.1 MGP_BALBcJ_G0029997.1 mouse_genomes_project 5 120652909 120722901 - MGP_BALBcJ_P0073953 Rph3a protein_coding unknown_likely_coding MGP_BALBcJ_T0073954.1 MGP_BALBcJ_G0029997.1 mouse_genomes_project 5 120652909 120722895 - MGP_BALBcJ_P0073954 Rph3a protein_coding protein_coding MGP_BALBcJ_T0073955.1 MGP_BALBcJ_G0029997.1 mouse_genomes_project 5 120685810 120723385 - MGP_BALBcJ_P0073955 Rph3a protein_coding protein_coding MGP_BALBcJ_T0074656.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129639515 129657141 + MGP_BALBcJ_P0074656 Sumf2 protein_coding protein_coding MGP_BALBcJ_T0074657.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129639525 129655922 + MGP_BALBcJ_P0074657 Sumf2 protein_coding unknown_likely_coding MGP_BALBcJ_T0074658.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129639540 129647421 + MGP_BALBcJ_P0074658 Sumf2 protein_coding protein_coding MGP_BALBcJ_T0074659.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129639549 129647511 + Sumf2 protein_coding processed_transcript MGP_BALBcJ_T0074660.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129639549 129655914 + MGP_BALBcJ_P0074660 Sumf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074661.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129645186 129655294 + Sumf2 protein_coding processed_transcript MGP_BALBcJ_T0074662.1 MGP_BALBcJ_G0030109.1 mouse_genomes_project 5 129645186 129655294 + Sumf2 protein_coding processed_transcript MGP_BALBcJ_T0004690.1 MGP_BALBcJ_G0004058.1 mouse_genomes_project 5 64939062 64941436 - Gm15948 antisense antisense MGP_BALBcJ_T0015145.1 MGP_BALBcJ_G0013242.1 mouse_genomes_project 5 137359280 137359557 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014882.1 MGP_BALBcJ_G0012979.1 mouse_genomes_project 5 21702408 21702806 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073682.1 MGP_BALBcJ_G0029941.1 mouse_genomes_project 5 114888770 114894666 + MGP_BALBcJ_P0073682 Srsf9 protein_coding protein_coding MGP_BALBcJ_T0073683.1 MGP_BALBcJ_G0029941.1 mouse_genomes_project 5 114889238 114894595 + Srsf9 protein_coding processed_transcript MGP_BALBcJ_T0073684.1 MGP_BALBcJ_G0029941.1 mouse_genomes_project 5 114890225 114894236 + Srsf9 protein_coding processed_transcript MGP_BALBcJ_T0073685.1 MGP_BALBcJ_G0029941.1 mouse_genomes_project 5 114892163 114894595 + MGP_BALBcJ_P0073685 Srsf9 protein_coding protein_coding MGP_BALBcJ_T0010689.1 MGP_BALBcJ_G0008814.1 mouse_genomes_project 5 114226009 114226073 + Mir7028 miRNA miRNA MGP_BALBcJ_T0071657.1 MGP_BALBcJ_G0029519.1 mouse_genomes_project 5 49083020 49183897 - MGP_BALBcJ_P0071657 Ppargc1a protein_coding protein_coding MGP_BALBcJ_T0071658.1 MGP_BALBcJ_G0029519.1 mouse_genomes_project 5 49086427 49183846 - MGP_BALBcJ_P0071658 Ppargc1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071659.1 MGP_BALBcJ_G0029519.1 mouse_genomes_project 5 49086429 49183866 - MGP_BALBcJ_P0071659 Ppargc1a protein_coding protein_coding MGP_BALBcJ_T0071660.1 MGP_BALBcJ_G0029519.1 mouse_genomes_project 5 49086954 49197642 - MGP_BALBcJ_P0071660 Ppargc1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071661.1 MGP_BALBcJ_G0029519.1 mouse_genomes_project 5 49123727 49197664 - MGP_BALBcJ_P0071661 Ppargc1a protein_coding protein_coding MGP_BALBcJ_T0071764.1 MGP_BALBcJ_G0029541.1 mouse_genomes_project 5 61791965 61852478 - MGP_BALBcJ_P0071764 Rell1 protein_coding protein_coding MGP_BALBcJ_T0071765.1 MGP_BALBcJ_G0029541.1 mouse_genomes_project 5 61792134 61852404 - MGP_BALBcJ_P0071765 Rell1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071766.1 MGP_BALBcJ_G0029541.1 mouse_genomes_project 5 61807493 61813438 - Rell1 protein_coding processed_transcript MGP_BALBcJ_T0071767.1 MGP_BALBcJ_G0029541.1 mouse_genomes_project 5 61809748 61813305 - Rell1 protein_coding retained_intron MGP_BALBcJ_T0071768.1 MGP_BALBcJ_G0029541.1 mouse_genomes_project 5 61843265 61852420 - Rell1 protein_coding processed_transcript MGP_BALBcJ_T0071920.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64238628 64253657 - Apbb2 protein_coding retained_intron MGP_BALBcJ_T0071921.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64238650 64562120 - MGP_BALBcJ_P0071921 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071922.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64238653 64562043 - MGP_BALBcJ_P0071922 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071923.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64238653 64562146 - MGP_BALBcJ_P0071923 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071924.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64238765 64562025 - MGP_BALBcJ_P0071924 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071925.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64240586 64433977 - Apbb2 protein_coding retained_intron MGP_BALBcJ_T0071926.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64241797 64279072 - Apbb2 protein_coding processed_transcript MGP_BALBcJ_T0071927.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64241812 64562033 - MGP_BALBcJ_P0071927 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071928.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64241812 64562033 - MGP_BALBcJ_P0071928 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071929.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64242129 64433976 - MGP_BALBcJ_P0071929 Apbb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071930.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64247507 64278873 - Apbb2 protein_coding processed_transcript MGP_BALBcJ_T0071931.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64341528 64562045 - Apbb2 protein_coding retained_intron MGP_BALBcJ_T0071932.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64341528 64562032 - Apbb2 protein_coding retained_intron MGP_BALBcJ_T0071933.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64393814 64562002 - MGP_BALBcJ_P0071933 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071934.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64393827 64456736 - MGP_BALBcJ_P0071934 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071935.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64393856 64562033 - MGP_BALBcJ_P0071935 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071936.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64394060 64562136 - MGP_BALBcJ_P0071936 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071937.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64394093 64456743 - MGP_BALBcJ_P0071937 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071938.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64394099 64489285 - MGP_BALBcJ_P0071938 Apbb2 protein_coding protein_coding MGP_BALBcJ_T0071939.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64403754 64562034 - Apbb2 protein_coding retained_intron MGP_BALBcJ_T0071940.1 MGP_BALBcJ_G0029566.1 mouse_genomes_project 5 64483018 64562050 - Apbb2 protein_coding retained_intron MGP_BALBcJ_T0001594.1 MGP_BALBcJ_G0001511.1 mouse_genomes_project 5 50193593 50196036 - TEC TEC MGP_BALBcJ_T0004818.1 MGP_BALBcJ_G0004150.1 mouse_genomes_project 5 124843385 124846904 + Gm42839 antisense antisense MGP_BALBcJ_T0001809.1 MGP_BALBcJ_G0001724.1 mouse_genomes_project 5 122672520 122674102 - TEC TEC MGP_BALBcJ_T0014835.1 MGP_BALBcJ_G0012932.1 mouse_genomes_project 5 7011236 7011981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072949.1 MGP_BALBcJ_G0029789.1 mouse_genomes_project 5 103075834 103087512 + MGP_BALBcJ_P0072949 Mepe protein_coding protein_coding MGP_BALBcJ_T0004655.1 MGP_BALBcJ_G0004032.1 mouse_genomes_project 5 34553471 34556756 - Ppp2r2cos antisense antisense MGP_BALBcJ_T0001640.1 MGP_BALBcJ_G0001556.1 mouse_genomes_project 5 63786312 63787226 + TEC TEC MGP_BALBcJ_T0075320.1 MGP_BALBcJ_G0030227.1 mouse_genomes_project 5 137860751 137889460 - MGP_BALBcJ_P0075320 Cyp3a13 protein_coding protein_coding MGP_BALBcJ_T0001731.1 MGP_BALBcJ_G0001646.1 mouse_genomes_project 5 100793013 100794050 - TEC TEC MGP_BALBcJ_T0004682.1 MGP_BALBcJ_G0004051.1 mouse_genomes_project 5 51234959 51235929 - Gm42747 antisense antisense MGP_BALBcJ_T0070720.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432145 28434659 + MGP_BALBcJ_P0070720 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070721.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432303 28440139 + MGP_BALBcJ_P0070721 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070722.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432386 28450288 + MGP_BALBcJ_P0070722 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070723.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432392 28437285 + Agbl5 protein_coding retained_intron MGP_BALBcJ_T0070724.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432407 28449990 + Agbl5 protein_coding retained_intron MGP_BALBcJ_T0070725.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432420 28439536 + Agbl5 protein_coding retained_intron MGP_BALBcJ_T0070726.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432420 28449989 + MGP_BALBcJ_P0070726 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070727.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432425 28446810 + MGP_BALBcJ_P0070727 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070728.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432452 28449989 + MGP_BALBcJ_P0070728 Agbl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070729.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432457 28449989 + MGP_BALBcJ_P0070729 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070730.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432457 28446810 + MGP_BALBcJ_P0070730 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070731.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28432777 28435321 + MGP_BALBcJ_P0070731 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0070732.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28433733 28435899 + Agbl5 protein_coding processed_transcript MGP_BALBcJ_T0070733.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28437655 28439546 + Agbl5 protein_coding retained_intron MGP_BALBcJ_T0070735.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28438590 28439567 + Agbl5 protein_coding retained_intron MGP_BALBcJ_T0070736.1 MGP_BALBcJ_G0029375.1 mouse_genomes_project 5 28439384 28449233 + MGP_BALBcJ_P0070736 Agbl5 protein_coding protein_coding MGP_BALBcJ_T0008276.1 MGP_BALBcJ_G0006730.1 mouse_genomes_project 5 111678525 111679940 + lincRNA lincRNA MGP_BALBcJ_T0073476.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113332545 113399943 - MGP_BALBcJ_P0073476 Coro1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073477.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113332545 113399996 - MGP_BALBcJ_P0073477 Coro1c protein_coding protein_coding MGP_BALBcJ_T0073478.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113335358 113341200 - Coro1c protein_coding retained_intron MGP_BALBcJ_T0073479.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113335369 113340203 - Coro1c protein_coding retained_intron MGP_BALBcJ_T0073480.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113336304 113337740 - Coro1c protein_coding retained_intron MGP_BALBcJ_T0073481.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113338231 113340008 - Coro1c protein_coding retained_intron MGP_BALBcJ_T0073482.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113338655 113365003 - Coro1c protein_coding processed_transcript MGP_BALBcJ_T0073483.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113338714 113349121 - Coro1c protein_coding processed_transcript MGP_BALBcJ_T0073484.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113356063 113373228 - MGP_BALBcJ_P0073484 Coro1c protein_coding protein_coding MGP_BALBcJ_T0073485.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113356121 113372714 - MGP_BALBcJ_P0073485 Coro1c protein_coding protein_coding MGP_BALBcJ_T0073486.1 MGP_BALBcJ_G0029902.1 mouse_genomes_project 5 113367353 113399883 - Coro1c protein_coding retained_intron MGP_BALBcJ_T0008192.1 MGP_BALBcJ_G0006677.1 mouse_genomes_project 5 96057257 96305696 + 4930467D21Rik lincRNA lincRNA MGP_BALBcJ_T0008193.1 MGP_BALBcJ_G0006677.1 mouse_genomes_project 5 96057287 96253062 + 4930467D21Rik lincRNA lincRNA MGP_BALBcJ_T0010715.1 MGP_BALBcJ_G0008840.1 mouse_genomes_project 5 138704020 138704103 + Gm24082 miRNA miRNA MGP_BALBcJ_T0075760.1 MGP_BALBcJ_G0030328.1 mouse_genomes_project 5 144069652 144083014 + Rsph10b protein_coding processed_transcript MGP_BALBcJ_T0075761.1 MGP_BALBcJ_G0030328.1 mouse_genomes_project 5 144069679 144123873 + MGP_BALBcJ_P0075761 Rsph10b protein_coding protein_coding MGP_BALBcJ_T0075762.1 MGP_BALBcJ_G0030328.1 mouse_genomes_project 5 144073700 144123877 + MGP_BALBcJ_P0075762 Rsph10b protein_coding unknown_likely_coding MGP_BALBcJ_T0075763.1 MGP_BALBcJ_G0030328.1 mouse_genomes_project 5 144073700 144083011 + MGP_BALBcJ_P0075763 Rsph10b protein_coding protein_coding MGP_BALBcJ_T0075764.1 MGP_BALBcJ_G0030328.1 mouse_genomes_project 5 144117805 144123682 + Rsph10b protein_coding processed_transcript MGP_BALBcJ_T0001466.1 MGP_BALBcJ_G0001387.1 mouse_genomes_project 5 18402930 18404263 + TEC TEC MGP_BALBcJ_T0014950.1 MGP_BALBcJ_G0013047.1 mouse_genomes_project 5 50580112 50581132 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075849.1 MGP_BALBcJ_G0030345.1 mouse_genomes_project 5 145360197 145380734 - MGP_BALBcJ_P0075849 Ptcd1 protein_coding protein_coding MGP_BALBcJ_T0075850.1 MGP_BALBcJ_G0030345.1 mouse_genomes_project 5 145379077 145380582 - MGP_BALBcJ_P0075850 Ptcd1 protein_coding protein_coding MGP_BALBcJ_T0074289.1 MGP_BALBcJ_G0030047.1 mouse_genomes_project 5 123275199 123277141 - MGP_BALBcJ_P0074289 Il31 protein_coding protein_coding MGP_BALBcJ_T0074290.1 MGP_BALBcJ_G0030047.1 mouse_genomes_project 5 123275200 123277635 - MGP_BALBcJ_P0074290 Il31 protein_coding protein_coding MGP_BALBcJ_T0074291.1 MGP_BALBcJ_G0030047.1 mouse_genomes_project 5 123275443 123285284 - MGP_BALBcJ_P0074291 Il31 protein_coding protein_coding MGP_BALBcJ_T0074292.1 MGP_BALBcJ_G0030047.1 mouse_genomes_project 5 123277203 123277564 - Il31 protein_coding processed_transcript MGP_BALBcJ_T0008405.1 MGP_BALBcJ_G0006815.1 mouse_genomes_project 5 140735502 140736265 - Gm43703 lincRNA lincRNA MGP_BALBcJ_T0015179.1 MGP_BALBcJ_G0013276.1 mouse_genomes_project 5 146298161 146298972 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001784.1 MGP_BALBcJ_G0001699.1 mouse_genomes_project 5 118228229 118230647 + TEC TEC MGP_BALBcJ_T0008152.1 MGP_BALBcJ_G0006642.1 mouse_genomes_project 5 73699658 73708126 + Gm43101 lincRNA lincRNA MGP_BALBcJ_T0008153.1 MGP_BALBcJ_G0006642.1 mouse_genomes_project 5 73706987 73708127 + Gm43101 lincRNA lincRNA MGP_BALBcJ_T0001887.1 MGP_BALBcJ_G0001800.1 mouse_genomes_project 5 140442498 140444708 - TEC TEC MGP_BALBcJ_T0071672.1 MGP_BALBcJ_G0029523.1 mouse_genomes_project 5 50184206 50217052 - MGP_BALBcJ_P0071672 Lgi2 protein_coding protein_coding MGP_BALBcJ_T0071673.1 MGP_BALBcJ_G0029523.1 mouse_genomes_project 5 50184206 50217211 - MGP_BALBcJ_P0071673 Lgi2 protein_coding protein_coding MGP_BALBcJ_T0102571.1 MGP_BALBcJ_G0040387.1 mouse_genomes_project 5 85393057 85405434 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001566.1 MGP_BALBcJ_G0001483.1 mouse_genomes_project 5 46674703 46677247 - TEC TEC MGP_BALBcJ_T0074511.1 MGP_BALBcJ_G0030081.1 mouse_genomes_project 5 124590104 124618134 - MGP_BALBcJ_P0074511 Ccdc92 protein_coding protein_coding MGP_BALBcJ_T0074512.1 MGP_BALBcJ_G0030081.1 mouse_genomes_project 5 124591579 124617588 - MGP_BALBcJ_P0074512 Ccdc92 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074513.1 MGP_BALBcJ_G0030081.1 mouse_genomes_project 5 124591755 124607285 - MGP_BALBcJ_P0074513 Ccdc92 protein_coding protein_coding MGP_BALBcJ_T0014906.1 MGP_BALBcJ_G0013003.1 mouse_genomes_project 5 28921442 28921889 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008140.1 MGP_BALBcJ_G0006633.1 mouse_genomes_project 5 71236585 71252160 - 1700025M24Rik lincRNA lincRNA MGP_BALBcJ_T0008141.1 MGP_BALBcJ_G0006633.1 mouse_genomes_project 5 71236585 71252172 - 1700025M24Rik lincRNA lincRNA MGP_BALBcJ_T0008142.1 MGP_BALBcJ_G0006633.1 mouse_genomes_project 5 71236603 71252166 - 1700025M24Rik lincRNA lincRNA MGP_BALBcJ_T0074362.1 MGP_BALBcJ_G0030056.1 mouse_genomes_project 5 123661340 123663273 - MGP_BALBcJ_P0074362 Hcar2 protein_coding protein_coding MGP_BALBcJ_T0074260.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 122937396 123025537 + Psmd9 protein_coding processed_transcript MGP_BALBcJ_T0074267.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 123014154 123031229 + Psmd9 protein_coding processed_transcript MGP_BALBcJ_T0074268.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 123014154 123035115 + MGP_BALBcJ_P0074268 Psmd9 protein_coding protein_coding MGP_BALBcJ_T0074269.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 123014222 123014991 + Psmd9 protein_coding retained_intron MGP_BALBcJ_T0074270.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 123014242 123033809 + MGP_BALBcJ_P0074270 Psmd9 protein_coding protein_coding MGP_BALBcJ_T0074271.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 123014317 123033809 + MGP_BALBcJ_P0074271 Psmd9 protein_coding protein_coding MGP_BALBcJ_T0074272.1 MGP_BALBcJ_G0030042.1 mouse_genomes_project 5 123014913 123016820 + Psmd9 protein_coding TEC MGP_BALBcJ_T0011569.1 MGP_BALBcJ_G0009694.1 mouse_genomes_project 5 22306401 22306646 - Gm25363 misc_RNA misc_RNA MGP_BALBcJ_T0014912.1 MGP_BALBcJ_G0013009.1 mouse_genomes_project 5 30722710 30722925 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075657.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143142203 143154986 + MGP_BALBcJ_P0075657 Fscn1 protein_coding protein_coding MGP_BALBcJ_T0075658.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143142236 143154984 + MGP_BALBcJ_P0075658 Fscn1 protein_coding protein_coding MGP_BALBcJ_T0075659.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143142703 143153971 + MGP_BALBcJ_P0075659 Fscn1 protein_coding protein_coding MGP_BALBcJ_T0075660.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143144809 143152353 + Fscn1 protein_coding processed_transcript MGP_BALBcJ_T0075661.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143145106 143153754 + Fscn1 protein_coding processed_transcript MGP_BALBcJ_T0075662.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143146389 143152475 + Fscn1 protein_coding processed_transcript MGP_BALBcJ_T0075663.1 MGP_BALBcJ_G0030306.1 mouse_genomes_project 5 143151885 143153790 + Fscn1 protein_coding retained_intron MGP_BALBcJ_T0071137.1 MGP_BALBcJ_G0029436.1 mouse_genomes_project 5 31845659 31863553 - MGP_BALBcJ_P0071137 Haus3 protein_coding protein_coding MGP_BALBcJ_T0071138.1 MGP_BALBcJ_G0029436.1 mouse_genomes_project 5 31856600 31863474 - Haus3 protein_coding retained_intron MGP_BALBcJ_T0071139.1 MGP_BALBcJ_G0029436.1 mouse_genomes_project 5 31856837 31857640 - Haus3 protein_coding processed_transcript MGP_BALBcJ_T0071140.1 MGP_BALBcJ_G0029436.1 mouse_genomes_project 5 31861958 31863478 - Haus3 protein_coding processed_transcript MGP_BALBcJ_T0071141.1 MGP_BALBcJ_G0029436.1 mouse_genomes_project 5 31862050 31863529 - MGP_BALBcJ_P0071141 Haus3 protein_coding protein_coding MGP_BALBcJ_T0071142.1 MGP_BALBcJ_G0029436.1 mouse_genomes_project 5 31862263 31863459 - MGP_BALBcJ_P0071142 Haus3 protein_coding protein_coding MGP_BALBcJ_T0075541.1 MGP_BALBcJ_G0030279.1 mouse_genomes_project 5 139935883 139939176 - MGP_BALBcJ_P0075541 Psmg3 protein_coding protein_coding MGP_BALBcJ_T0075542.1 MGP_BALBcJ_G0030279.1 mouse_genomes_project 5 139935904 139939134 - MGP_BALBcJ_P0075542 Psmg3 protein_coding protein_coding MGP_BALBcJ_T0075543.1 MGP_BALBcJ_G0030279.1 mouse_genomes_project 5 139936765 139939166 - Psmg3 protein_coding retained_intron MGP_BALBcJ_T0018104.1 MGP_BALBcJ_G0015536.1 mouse_genomes_project 5 49829493 49835802 + 9230114K14Rik processed_transcript lincRNA MGP_BALBcJ_T0018105.1 MGP_BALBcJ_G0015536.1 mouse_genomes_project 5 49829500 49839279 + 9230114K14Rik processed_transcript retained_intron MGP_BALBcJ_T0018106.1 MGP_BALBcJ_G0015536.1 mouse_genomes_project 5 49829500 49920082 + 9230114K14Rik processed_transcript lincRNA MGP_BALBcJ_T0018107.1 MGP_BALBcJ_G0015536.1 mouse_genomes_project 5 49829534 49887147 + 9230114K14Rik processed_transcript lincRNA MGP_BALBcJ_T0070613.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27288445 27339541 + MGP_BALBcJ_P0070613 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070614.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27288697 27319663 + MGP_BALBcJ_P0070614 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070615.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27288746 27338703 + MGP_BALBcJ_P0070615 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070616.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27288752 27310623 + MGP_BALBcJ_P0070616 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070617.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27288781 27291846 + Dnajb6 protein_coding processed_transcript MGP_BALBcJ_T0070618.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27288790 27375107 + MGP_BALBcJ_P0070618 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070619.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27290022 27301197 + MGP_BALBcJ_P0070619 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070620.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27303382 27305399 + Dnajb6 protein_coding retained_intron MGP_BALBcJ_T0070621.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27307000 27310614 + Dnajb6 protein_coding processed_transcript MGP_BALBcJ_T0070622.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27316836 27318283 + Dnajb6 protein_coding retained_intron MGP_BALBcJ_T0070623.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27317130 27334078 + MGP_BALBcJ_P0070623 Dnajb6 protein_coding protein_coding MGP_BALBcJ_T0070624.1 MGP_BALBcJ_G0029356.1 mouse_genomes_project 5 27317845 27319279 + Dnajb6 protein_coding retained_intron MGP_BALBcJ_T0001505.1 MGP_BALBcJ_G0001423.1 mouse_genomes_project 5 32269139 32269608 + TEC TEC MGP_BALBcJ_T0014827.1 MGP_BALBcJ_G0012924.1 mouse_genomes_project 5 4304354 4304940 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072487.1 MGP_BALBcJ_G0029681.1 mouse_genomes_project 5 86751383 86761246 + MGP_BALBcJ_P0072487 Amtn protein_coding protein_coding MGP_BALBcJ_T0072887.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101205807 101631227 + MGP_BALBcJ_P0072887 Arhgap24 protein_coding protein_coding MGP_BALBcJ_T0072888.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101205807 101631226 + MGP_BALBcJ_P0072888 Arhgap24 protein_coding protein_coding MGP_BALBcJ_T0072889.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101205946 101396535 + Arhgap24 protein_coding retained_intron MGP_BALBcJ_T0072890.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101392734 101631227 + MGP_BALBcJ_P0072890 Arhgap24 protein_coding protein_coding MGP_BALBcJ_T0072891.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101450928 101631227 + MGP_BALBcJ_P0072891 Arhgap24 protein_coding protein_coding MGP_BALBcJ_T0072892.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101498464 101631228 + MGP_BALBcJ_P0072892 Arhgap24 protein_coding protein_coding MGP_BALBcJ_T0072893.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101538988 101609635 + Arhgap24 protein_coding processed_transcript MGP_BALBcJ_T0072894.1 MGP_BALBcJ_G0029774.1 mouse_genomes_project 5 101575152 101631227 + MGP_BALBcJ_P0072894 Arhgap24 protein_coding protein_coding MGP_BALBcJ_T0070795.1 MGP_BALBcJ_G0029386.1 mouse_genomes_project 5 28651948 28657613 + MGP_BALBcJ_P0070795 Dnajc5g protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070796.1 MGP_BALBcJ_G0029386.1 mouse_genomes_project 5 28653935 28657368 + MGP_BALBcJ_P0070796 Dnajc5g protein_coding protein_coding MGP_BALBcJ_T0070797.1 MGP_BALBcJ_G0029386.1 mouse_genomes_project 5 28653945 28657472 + MGP_BALBcJ_P0070797 Dnajc5g protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070798.1 MGP_BALBcJ_G0029386.1 mouse_genomes_project 5 28653947 28658155 + MGP_BALBcJ_P0070798 Dnajc5g protein_coding protein_coding MGP_BALBcJ_T0073871.1 MGP_BALBcJ_G0029974.1 mouse_genomes_project 5 119484349 119492512 + MGP_BALBcJ_P0073871 Tbx5 protein_coding protein_coding MGP_BALBcJ_T0073872.1 MGP_BALBcJ_G0029974.1 mouse_genomes_project 5 119486430 119536879 + MGP_BALBcJ_P0073872 Tbx5 protein_coding protein_coding MGP_BALBcJ_T0073873.1 MGP_BALBcJ_G0029974.1 mouse_genomes_project 5 119487785 119496742 + MGP_BALBcJ_P0073873 Tbx5 protein_coding protein_coding MGP_BALBcJ_T0008067.1 MGP_BALBcJ_G0006579.1 mouse_genomes_project 5 32002492 32020791 - Gm43458 lincRNA lincRNA MGP_BALBcJ_T0073339.1 MGP_BALBcJ_G0029872.1 mouse_genomes_project 5 110303315 110304671 + MGP_BALBcJ_P0073339 Chek2 protein_coding protein_coding MGP_BALBcJ_T0073340.1 MGP_BALBcJ_G0029872.1 mouse_genomes_project 5 110303319 110338973 + MGP_BALBcJ_P0073340 Chek2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073341.1 MGP_BALBcJ_G0029872.1 mouse_genomes_project 5 110303336 110338985 + MGP_BALBcJ_P0073341 Chek2 protein_coding protein_coding MGP_BALBcJ_T0073342.1 MGP_BALBcJ_G0029872.1 mouse_genomes_project 5 110303565 110304677 + MGP_BALBcJ_P0073342 Chek2 protein_coding protein_coding MGP_BALBcJ_T0073343.1 MGP_BALBcJ_G0029872.1 mouse_genomes_project 5 110304791 110314373 + Chek2 protein_coding retained_intron MGP_BALBcJ_T0010662.1 MGP_BALBcJ_G0008787.1 mouse_genomes_project 5 49774808 49774924 - Mir6417 miRNA miRNA MGP_BALBcJ_T0004804.1 MGP_BALBcJ_G0004142.1 mouse_genomes_project 5 123117659 123129198 - Gm15860 antisense antisense MGP_BALBcJ_T0004805.1 MGP_BALBcJ_G0004142.1 mouse_genomes_project 5 123119341 123129300 - Gm15860 antisense antisense MGP_BALBcJ_T0004806.1 MGP_BALBcJ_G0004142.1 mouse_genomes_project 5 123119477 123126762 - Gm15860 antisense antisense MGP_BALBcJ_T0010676.1 MGP_BALBcJ_G0008801.1 mouse_genomes_project 5 89171105 89171175 - Gm24322 miRNA miRNA MGP_BALBcJ_T0072521.1 MGP_BALBcJ_G0029691.1 mouse_genomes_project 5 87781756 87816994 - MGP_BALBcJ_P0072521 Gc protein_coding protein_coding MGP_BALBcJ_T0072522.1 MGP_BALBcJ_G0029691.1 mouse_genomes_project 5 87786413 87793191 - MGP_BALBcJ_P0072522 Gc protein_coding protein_coding MGP_BALBcJ_T0072219.1 MGP_BALBcJ_G0029617.1 mouse_genomes_project 5 74136602 74147832 + Srd5a3 protein_coding retained_intron MGP_BALBcJ_T0072220.1 MGP_BALBcJ_G0029617.1 mouse_genomes_project 5 74136637 74137194 + Srd5a3 protein_coding processed_transcript MGP_BALBcJ_T0072221.1 MGP_BALBcJ_G0029617.1 mouse_genomes_project 5 74136659 74151920 + MGP_BALBcJ_P0072221 Srd5a3 protein_coding protein_coding MGP_BALBcJ_T0072222.1 MGP_BALBcJ_G0029617.1 mouse_genomes_project 5 74149213 74151949 + Srd5a3 protein_coding retained_intron MGP_BALBcJ_T0018144.1 MGP_BALBcJ_G0015549.1 mouse_genomes_project 5 122755691 122779673 - Gm44574 processed_transcript processed_transcript MGP_BALBcJ_T0073152.1 MGP_BALBcJ_G0029834.1 mouse_genomes_project 5 107523460 107555518 - MGP_BALBcJ_P0073152 Cplx1 protein_coding protein_coding MGP_BALBcJ_T0073153.1 MGP_BALBcJ_G0029834.1 mouse_genomes_project 5 107525165 107555494 - MGP_BALBcJ_P0073153 Cplx1 protein_coding protein_coding MGP_BALBcJ_T0010654.1 MGP_BALBcJ_G0008779.1 mouse_genomes_project 5 31587051 31587113 - Mir7024 miRNA miRNA MGP_BALBcJ_T0102581.1 MGP_BALBcJ_G0040397.1 mouse_genomes_project 5 136929395 136931298 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0004678.1 MGP_BALBcJ_G0004047.1 mouse_genomes_project 5 50089430 50094515 + antisense antisense MGP_BALBcJ_T0071419.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35720038 35812478 + MGP_BALBcJ_P0071419 Stx18 protein_coding protein_coding MGP_BALBcJ_T0071420.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35720056 35812484 + MGP_BALBcJ_P0071420 Stx18 protein_coding protein_coding MGP_BALBcJ_T0071421.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35720087 35796254 + MGP_BALBcJ_P0071421 Stx18 protein_coding protein_coding MGP_BALBcJ_T0071422.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35720137 35812488 + MGP_BALBcJ_P0071422 Stx18 protein_coding protein_coding MGP_BALBcJ_T0071423.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35756646 35808086 + MGP_BALBcJ_P0071423 Stx18 protein_coding protein_coding MGP_BALBcJ_T0071424.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35791120 35801298 + Stx18 protein_coding processed_transcript MGP_BALBcJ_T0071425.1 MGP_BALBcJ_G0029482.1 mouse_genomes_project 5 35800907 35808112 + Stx18 protein_coding retained_intron MGP_BALBcJ_T0010658.1 MGP_BALBcJ_G0008783.1 mouse_genomes_project 5 34001176 34001235 + Mir7689 miRNA miRNA MGP_BALBcJ_T0076007.1 MGP_BALBcJ_G0030380.1 mouse_genomes_project 5 149332832 149438632 - MGP_BALBcJ_P0076007 Gm42791 protein_coding protein_coding MGP_BALBcJ_T0076010.1 MGP_BALBcJ_G0030380.1 mouse_genomes_project 5 149424002 149424617 - Gm42791 protein_coding processed_transcript MGP_BALBcJ_T0072805.1 MGP_BALBcJ_G0029759.1 mouse_genomes_project 5 98746745 98774591 + MGP_BALBcJ_P0072805 Enoph1 protein_coding protein_coding MGP_BALBcJ_T0072806.1 MGP_BALBcJ_G0029759.1 mouse_genomes_project 5 98746804 98774591 + MGP_BALBcJ_P0072806 Enoph1 protein_coding protein_coding MGP_BALBcJ_T0072807.1 MGP_BALBcJ_G0029759.1 mouse_genomes_project 5 98746828 98767220 + Enoph1 protein_coding retained_intron MGP_BALBcJ_T0072808.1 MGP_BALBcJ_G0029759.1 mouse_genomes_project 5 98767834 98770029 + Enoph1 protein_coding processed_transcript MGP_BALBcJ_T0008197.1 MGP_BALBcJ_G0006679.1 mouse_genomes_project 5 97724342 97857498 - Gm43251 lincRNA lincRNA MGP_BALBcJ_T0074514.1 MGP_BALBcJ_G0030082.1 mouse_genomes_project 5 124618400 124644300 + MGP_BALBcJ_P0074514 Zfp664 protein_coding protein_coding MGP_BALBcJ_T0074515.1 MGP_BALBcJ_G0030082.1 mouse_genomes_project 5 124618473 124657789 + Zfp664 protein_coding processed_transcript MGP_BALBcJ_T0074516.1 MGP_BALBcJ_G0030082.1 mouse_genomes_project 5 124618748 124640977 + Zfp664 protein_coding processed_transcript MGP_BALBcJ_T0074517.1 MGP_BALBcJ_G0030082.1 mouse_genomes_project 5 124629858 124632003 + Zfp664 protein_coding processed_transcript MGP_BALBcJ_T0074518.1 MGP_BALBcJ_G0030082.1 mouse_genomes_project 5 124631675 124641147 + Zfp664 protein_coding processed_transcript MGP_BALBcJ_T0074519.1 MGP_BALBcJ_G0030082.1 mouse_genomes_project 5 124640238 124644300 + Zfp664 protein_coding processed_transcript MGP_BALBcJ_T0001777.1 MGP_BALBcJ_G0001692.1 mouse_genomes_project 5 116099268 116100604 - TEC TEC MGP_BALBcJ_T0008430.1 MGP_BALBcJ_G0006837.1 mouse_genomes_project 5 149392504 149393920 + 8430423G03Rik lincRNA lincRNA MGP_BALBcJ_T0008456.1 MGP_BALBcJ_G0006853.1 mouse_genomes_project 5 151066925 151067191 - Gm43690 lincRNA lincRNA MGP_BALBcJ_T0099929.1 MGP_BALBcJ_G0037965.1 mouse_genomes_project 5 67823486 67823574 + Gm23661 snRNA snRNA MGP_BALBcJ_T0070032.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1786019 2280269 - MGP_BALBcJ_P0070032 Cdk14 protein_coding protein_coding MGP_BALBcJ_T0070033.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1786019 2401363 - MGP_BALBcJ_P0070033 Cdk14 protein_coding protein_coding MGP_BALBcJ_T0070034.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1788464 2279512 - MGP_BALBcJ_P0070034 Cdk14 protein_coding protein_coding MGP_BALBcJ_T0070035.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1789319 2280366 - MGP_BALBcJ_P0070035 Cdk14 protein_coding protein_coding MGP_BALBcJ_T0070036.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1876921 1880340 - Cdk14 protein_coding retained_intron MGP_BALBcJ_T0070037.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1913939 2280183 - Cdk14 protein_coding retained_intron MGP_BALBcJ_T0070038.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1925526 2028109 - Cdk14 protein_coding processed_transcript MGP_BALBcJ_T0070039.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 1997049 2401390 - Cdk14 protein_coding retained_intron MGP_BALBcJ_T0070040.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 2088452 2401417 - Cdk14 protein_coding retained_intron MGP_BALBcJ_T0070041.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 2129859 2401359 - Cdk14 protein_coding retained_intron MGP_BALBcJ_T0070042.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 2185352 2196141 - Cdk14 protein_coding processed_transcript MGP_BALBcJ_T0070043.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 2237045 2280493 - MGP_BALBcJ_P0070043 Cdk14 protein_coding protein_coding MGP_BALBcJ_T0070044.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 2237046 2434241 - MGP_BALBcJ_P0070044 Cdk14 protein_coding protein_coding MGP_BALBcJ_T0070045.1 MGP_BALBcJ_G0029251.1 mouse_genomes_project 5 2263387 2280504 - Cdk14 protein_coding processed_transcript MGP_BALBcJ_T0071117.1 MGP_BALBcJ_G0029432.1 mouse_genomes_project 5 31586059 31616008 - MGP_BALBcJ_P0071117 Nelfa protein_coding protein_coding MGP_BALBcJ_T0071118.1 MGP_BALBcJ_G0029432.1 mouse_genomes_project 5 31598102 31615845 - Nelfa protein_coding retained_intron MGP_BALBcJ_T0014855.1 MGP_BALBcJ_G0012952.1 mouse_genomes_project 5 17636278 17636618 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075302.1 MGP_BALBcJ_G0030223.1 mouse_genomes_project 5 137749544 137783830 + MGP_BALBcJ_P0075302 protein_coding unknown_likely_coding MGP_BALBcJ_T0075303.1 MGP_BALBcJ_G0030223.1 mouse_genomes_project 5 137755057 137758268 + protein_coding retained_intron MGP_BALBcJ_T0075304.1 MGP_BALBcJ_G0030223.1 mouse_genomes_project 5 137762361 137765264 + protein_coding retained_intron MGP_BALBcJ_T0075305.1 MGP_BALBcJ_G0030223.1 mouse_genomes_project 5 137762590 137775814 + protein_coding processed_transcript MGP_BALBcJ_T0075306.1 MGP_BALBcJ_G0030223.1 mouse_genomes_project 5 137775030 137783532 + MGP_BALBcJ_P0075306 protein_coding protein_coding MGP_BALBcJ_T0001616.1 MGP_BALBcJ_G0001533.1 mouse_genomes_project 5 56876805 56879059 + TEC TEC MGP_BALBcJ_T0001873.1 MGP_BALBcJ_G0001786.1 mouse_genomes_project 5 134328223 134332408 - TEC TEC MGP_BALBcJ_T0018162.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149396019 149403110 - 1810059H22Rik processed_transcript lincRNA MGP_BALBcJ_T0018163.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149396937 149398805 - 1810059H22Rik processed_transcript retained_intron MGP_BALBcJ_T0018164.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149401501 149402604 - 1810059H22Rik processed_transcript lincRNA MGP_BALBcJ_T0018165.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149401573 149413115 - 1810059H22Rik processed_transcript lincRNA MGP_BALBcJ_T0018166.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149401792 149402580 - 1810059H22Rik processed_transcript retained_intron MGP_BALBcJ_T0018167.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149402035 149407520 - 1810059H22Rik processed_transcript retained_intron MGP_BALBcJ_T0018168.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149407187 149413129 - 1810059H22Rik processed_transcript lincRNA MGP_BALBcJ_T0018169.1 MGP_BALBcJ_G0015555.1 mouse_genomes_project 5 149408006 149413355 - 1810059H22Rik processed_transcript lincRNA MGP_BALBcJ_T0073865.1 MGP_BALBcJ_G0029973.1 mouse_genomes_project 5 119313076 119316128 + Tbx3 protein_coding retained_intron MGP_BALBcJ_T0073866.1 MGP_BALBcJ_G0029973.1 mouse_genomes_project 5 119313076 119327018 + MGP_BALBcJ_P0073866 Tbx3 protein_coding protein_coding MGP_BALBcJ_T0073867.1 MGP_BALBcJ_G0029973.1 mouse_genomes_project 5 119313269 119327180 + MGP_BALBcJ_P0073867 Tbx3 protein_coding protein_coding MGP_BALBcJ_T0073868.1 MGP_BALBcJ_G0029973.1 mouse_genomes_project 5 119313425 119327180 + MGP_BALBcJ_P0073868 Tbx3 protein_coding protein_coding MGP_BALBcJ_T0073869.1 MGP_BALBcJ_G0029973.1 mouse_genomes_project 5 119317906 119323106 + Tbx3 protein_coding retained_intron MGP_BALBcJ_T0073870.1 MGP_BALBcJ_G0029973.1 mouse_genomes_project 5 119322724 119323308 + Tbx3 protein_coding processed_transcript MGP_BALBcJ_T0004797.1 MGP_BALBcJ_G0004136.1 mouse_genomes_project 5 121781183 121785556 + Gm3970 antisense antisense MGP_BALBcJ_T0001502.1 MGP_BALBcJ_G0001420.1 mouse_genomes_project 5 31403692 31407321 - TEC TEC MGP_BALBcJ_T0001664.1 MGP_BALBcJ_G0001580.1 mouse_genomes_project 5 65762068 65765547 - TEC TEC MGP_BALBcJ_T0098376.1 MGP_BALBcJ_G0036430.1 mouse_genomes_project 5 42629946 42630328 - pseudogene pseudogene MGP_BALBcJ_T0001492.1 MGP_BALBcJ_G0001411.1 mouse_genomes_project 5 29533761 29534456 + TEC TEC MGP_BALBcJ_T0001678.1 MGP_BALBcJ_G0001594.1 mouse_genomes_project 5 70741204 70743311 - TEC TEC MGP_BALBcJ_T0099935.1 MGP_BALBcJ_G0037971.1 mouse_genomes_project 5 73533912 73534017 - Gm24502 snRNA snRNA MGP_BALBcJ_T0015042.1 MGP_BALBcJ_G0013139.1 mouse_genomes_project 5 87866945 87867771 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071691.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50502929 50536605 + MGP_BALBcJ_P0071691 Anapc4 protein_coding protein_coding MGP_BALBcJ_T0071692.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50503043 50535550 + MGP_BALBcJ_P0071692 Anapc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071693.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50511221 50517132 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071694.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50511337 50519031 + MGP_BALBcJ_P0071694 Anapc4 protein_coding protein_coding MGP_BALBcJ_T0071695.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50511350 50519018 + MGP_BALBcJ_P0071695 Anapc4 protein_coding protein_coding MGP_BALBcJ_T0071696.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50516069 50517207 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071697.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50518655 50527968 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071698.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50523730 50525775 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071699.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50527860 50534804 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071700.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50529714 50531358 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071701.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50529956 50533463 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0071702.1 MGP_BALBcJ_G0029527.1 mouse_genomes_project 5 50534420 50535542 + Anapc4 protein_coding retained_intron MGP_BALBcJ_T0001676.1 MGP_BALBcJ_G0001592.1 mouse_genomes_project 5 67455503 67455829 - TEC TEC MGP_BALBcJ_T0070080.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2681713 2712090 - MGP_BALBcJ_P0070080 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070081.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2681715 2699930 - MGP_BALBcJ_P0070081 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070082.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2682838 2711572 - MGP_BALBcJ_P0070082 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070083.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2687804 2711564 - MGP_BALBcJ_P0070083 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070084.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2688357 2711579 - MGP_BALBcJ_P0070084 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070085.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2688591 2694152 - Steap2 protein_coding processed_transcript MGP_BALBcJ_T0070086.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2688596 2711572 - MGP_BALBcJ_P0070086 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070087.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2690371 2711838 - MGP_BALBcJ_P0070087 Steap2 protein_coding protein_coding MGP_BALBcJ_T0070088.1 MGP_BALBcJ_G0029256.1 mouse_genomes_project 5 2692961 2712045 - Steap2 protein_coding retained_intron MGP_BALBcJ_T0001668.1 MGP_BALBcJ_G0001584.1 mouse_genomes_project 5 66873615 66878039 - TEC TEC MGP_BALBcJ_T0071961.1 MGP_BALBcJ_G0029569.1 mouse_genomes_project 5 65039546 65044429 - MGP_BALBcJ_P0071961 Phox2b protein_coding protein_coding MGP_BALBcJ_T0071962.1 MGP_BALBcJ_G0029569.1 mouse_genomes_project 5 65042167 65044185 - MGP_BALBcJ_P0071962 Phox2b protein_coding protein_coding MGP_BALBcJ_T0014917.1 MGP_BALBcJ_G0013014.1 mouse_genomes_project 5 31444048 31444219 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072369.1 MGP_BALBcJ_G0029640.1 mouse_genomes_project 5 84186863 84244610 - MGP_BALBcJ_P0072369 Cenpc1 protein_coding protein_coding MGP_BALBcJ_T0072370.1 MGP_BALBcJ_G0029640.1 mouse_genomes_project 5 84218917 84244578 - Cenpc1 protein_coding retained_intron MGP_BALBcJ_T0072371.1 MGP_BALBcJ_G0029640.1 mouse_genomes_project 5 84218918 84244574 - Cenpc1 protein_coding retained_intron MGP_BALBcJ_T0072372.1 MGP_BALBcJ_G0029640.1 mouse_genomes_project 5 84232733 84244549 - Cenpc1 protein_coding retained_intron MGP_BALBcJ_T0075759.1 MGP_BALBcJ_G0030327.1 mouse_genomes_project 5 144064420 144073927 + MGP_BALBcJ_P0075759 Gm42421 protein_coding protein_coding MGP_BALBcJ_T0073950.1 MGP_BALBcJ_G0029995.1 mouse_genomes_project 5 120605795 120619005 - MGP_BALBcJ_P0073950 Oas1a protein_coding protein_coding MGP_BALBcJ_T0073951.1 MGP_BALBcJ_G0029995.1 mouse_genomes_project 5 120606375 120619036 - MGP_BALBcJ_P0073951 Oas1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074140.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122146852 122157244 + Arpc3 protein_coding retained_intron MGP_BALBcJ_T0074141.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122146896 122152118 + Arpc3 protein_coding retained_intron MGP_BALBcJ_T0074142.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122146922 122165989 + MGP_BALBcJ_P0074142 Arpc3 protein_coding protein_coding MGP_BALBcJ_T0074143.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122151791 122169102 + MGP_BALBcJ_P0074143 Arpc3 protein_coding protein_coding MGP_BALBcJ_T0074144.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122155188 122161062 + MGP_BALBcJ_P0074144 Arpc3 protein_coding protein_coding MGP_BALBcJ_T0074145.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122155315 122161053 + MGP_BALBcJ_P0074145 Arpc3 protein_coding protein_coding MGP_BALBcJ_T0074146.1 MGP_BALBcJ_G0030027.1 mouse_genomes_project 5 122158331 122159697 + Arpc3 protein_coding retained_intron MGP_BALBcJ_T0073130.1 MGP_BALBcJ_G0029827.1 mouse_genomes_project 5 107117195 107147119 + MGP_BALBcJ_P0073130 Ccdc18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073131.1 MGP_BALBcJ_G0029827.1 mouse_genomes_project 5 107117234 107227612 + MGP_BALBcJ_P0073131 Ccdc18 protein_coding protein_coding MGP_BALBcJ_T0073132.1 MGP_BALBcJ_G0029827.1 mouse_genomes_project 5 107117266 107123713 + Ccdc18 protein_coding retained_intron MGP_BALBcJ_T0073133.1 MGP_BALBcJ_G0029827.1 mouse_genomes_project 5 107147304 107167601 + Ccdc18 protein_coding processed_transcript MGP_BALBcJ_T0074472.1 MGP_BALBcJ_G0030074.1 mouse_genomes_project 5 124306485 124344935 - MGP_BALBcJ_P0074472 Rilpl1 protein_coding protein_coding MGP_BALBcJ_T0074473.1 MGP_BALBcJ_G0030074.1 mouse_genomes_project 5 124306942 124318109 - MGP_BALBcJ_P0074473 Rilpl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074474.1 MGP_BALBcJ_G0030074.1 mouse_genomes_project 5 124307057 124328816 - MGP_BALBcJ_P0074474 Rilpl1 protein_coding protein_coding MGP_BALBcJ_T0074475.1 MGP_BALBcJ_G0030074.1 mouse_genomes_project 5 124307069 124328900 - MGP_BALBcJ_P0074475 Rilpl1 protein_coding protein_coding MGP_BALBcJ_T0014859.1 MGP_BALBcJ_G0012956.1 mouse_genomes_project 5 18500212 18501608 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001655.1 MGP_BALBcJ_G0001571.1 mouse_genomes_project 5 64633127 64635647 + TEC TEC MGP_BALBcJ_T0004756.1 MGP_BALBcJ_G0004109.1 mouse_genomes_project 5 112270019 112278428 + 1700095B10Rik antisense antisense MGP_BALBcJ_T0004757.1 MGP_BALBcJ_G0004109.1 mouse_genomes_project 5 112270027 112272419 + 1700095B10Rik antisense antisense MGP_BALBcJ_T0004758.1 MGP_BALBcJ_G0004109.1 mouse_genomes_project 5 112270036 112278376 + 1700095B10Rik antisense antisense MGP_BALBcJ_T0004759.1 MGP_BALBcJ_G0004109.1 mouse_genomes_project 5 112270059 112272670 + 1700095B10Rik antisense antisense MGP_BALBcJ_T0071102.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31506862 31586110 + MGP_BALBcJ_P0071102 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071103.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31506881 31560652 + MGP_BALBcJ_P0071103 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071104.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31506966 31532786 + MGP_BALBcJ_P0071104 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071105.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31529715 31586119 + MGP_BALBcJ_P0071105 Whsc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071106.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31529715 31565427 + MGP_BALBcJ_P0071106 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071107.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31529715 31586119 + MGP_BALBcJ_P0071107 Whsc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071108.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31529715 31586110 + MGP_BALBcJ_P0071108 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071109.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31529744 31583856 + MGP_BALBcJ_P0071109 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071110.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31529799 31583639 + MGP_BALBcJ_P0071110 Whsc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071111.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31549224 31565435 + MGP_BALBcJ_P0071111 Whsc1 protein_coding protein_coding MGP_BALBcJ_T0071112.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31566362 31568224 + Whsc1 protein_coding retained_intron MGP_BALBcJ_T0071113.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31567296 31583570 + MGP_BALBcJ_P0071113 Whsc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071114.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31573640 31579821 + Whsc1 protein_coding retained_intron MGP_BALBcJ_T0071115.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31573654 31575842 + Whsc1 protein_coding retained_intron MGP_BALBcJ_T0071116.1 MGP_BALBcJ_G0029431.1 mouse_genomes_project 5 31580051 31583239 + Whsc1 protein_coding retained_intron MGP_BALBcJ_T0075552.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140442532 140458508 + MGP_BALBcJ_P0075552 Nudt1 protein_coding protein_coding MGP_BALBcJ_T0075554.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140452720 140459013 + MGP_BALBcJ_P0075554 Nudt1 protein_coding protein_coding MGP_BALBcJ_T0075555.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140452769 140459013 + MGP_BALBcJ_P0075555 Nudt1 protein_coding protein_coding MGP_BALBcJ_T0075556.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140452814 140458817 + MGP_BALBcJ_P0075556 Nudt1 protein_coding protein_coding MGP_BALBcJ_T0075557.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140453255 140458684 + MGP_BALBcJ_P0075557 Nudt1 protein_coding protein_coding MGP_BALBcJ_T0075558.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140453284 140456572 + MGP_BALBcJ_P0075558 Nudt1 protein_coding protein_coding MGP_BALBcJ_T0075559.1 MGP_BALBcJ_G0030282.1 mouse_genomes_project 5 140455449 140456688 + Nudt1 protein_coding processed_transcript MGP_BALBcJ_T0073967.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 120941625 121092904 + MGP_BALBcJ_P0073967 Gm15800 protein_coding protein_coding MGP_BALBcJ_T0073968.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 121009124 121027250 + MGP_BALBcJ_P0073968 Gm15800 protein_coding protein_coding MGP_BALBcJ_T0073969.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 121009727 121027833 + Gm15800 protein_coding retained_intron MGP_BALBcJ_T0073970.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 121014138 121022248 + MGP_BALBcJ_P0073970 Gm15800 protein_coding protein_coding MGP_BALBcJ_T0073971.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 121028756 121047857 + MGP_BALBcJ_P0073971 Gm15800 protein_coding protein_coding MGP_BALBcJ_T0073972.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 121038781 121041683 + Gm15800 protein_coding processed_transcript MGP_BALBcJ_T0073973.1 MGP_BALBcJ_G0030000.1 mouse_genomes_project 5 121043056 121045813 + Gm15800 protein_coding processed_transcript MGP_BALBcJ_T0015028.1 MGP_BALBcJ_G0013125.1 mouse_genomes_project 5 85205090 85206150 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101722.1 MGP_BALBcJ_G0039697.1 mouse_genomes_project 5 74193776 74194246 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0010724.1 MGP_BALBcJ_G0008849.1 mouse_genomes_project 5 149704103 149704181 - miRNA miRNA MGP_BALBcJ_T0004780.1 MGP_BALBcJ_G0004125.1 mouse_genomes_project 5 117683185 117687539 + Gm9754 antisense antisense MGP_BALBcJ_T0001693.1 MGP_BALBcJ_G0001608.1 mouse_genomes_project 5 72340973 72343728 - TEC TEC MGP_BALBcJ_T0001886.1 MGP_BALBcJ_G0001799.1 mouse_genomes_project 5 140266173 140268505 - TEC TEC MGP_BALBcJ_T0071153.1 MGP_BALBcJ_G0029439.1 mouse_genomes_project 5 31981487 32026086 + MGP_BALBcJ_P0071153 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0008251.1 MGP_BALBcJ_G0006717.1 mouse_genomes_project 5 109836330 109838572 + Gm26711 lincRNA lincRNA MGP_BALBcJ_T0014920.1 MGP_BALBcJ_G0013017.1 mouse_genomes_project 5 31780892 31781223 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008271.1 MGP_BALBcJ_G0006727.1 mouse_genomes_project 5 111624770 111633717 + Gm42491 lincRNA lincRNA MGP_BALBcJ_T0074242.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122835642 122884705 + Tmem120b protein_coding processed_transcript MGP_BALBcJ_T0074243.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122843345 122885772 + MGP_BALBcJ_P0074243 Tmem120b protein_coding protein_coding MGP_BALBcJ_T0074244.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122843395 122883141 + MGP_BALBcJ_P0074244 Tmem120b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074245.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122843396 122885032 + MGP_BALBcJ_P0074245 Tmem120b protein_coding protein_coding MGP_BALBcJ_T0074246.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122843411 122883159 + MGP_BALBcJ_P0074246 Tmem120b protein_coding protein_coding MGP_BALBcJ_T0074247.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122843421 122871833 + Tmem120b protein_coding retained_intron MGP_BALBcJ_T0074248.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122843440 122867610 + Tmem120b protein_coding retained_intron MGP_BALBcJ_T0074249.1 MGP_BALBcJ_G0030039.1 mouse_genomes_project 5 122867142 122883843 + Tmem120b protein_coding retained_intron MGP_BALBcJ_T0015121.1 MGP_BALBcJ_G0013218.1 mouse_genomes_project 5 121196547 121197369 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070568.1 MGP_BALBcJ_G0029344.1 mouse_genomes_project 5 25376920 25392401 + MGP_BALBcJ_P0070568 Htr5a protein_coding protein_coding MGP_BALBcJ_T0101920.1 MGP_BALBcJ_G0039799.1 mouse_genomes_project 5 70968885 70975610 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0069986.1 MGP_BALBcJ_G0029243.1 mouse_genomes_project 5 578343 599866 + MGP_BALBcJ_P0069986 Tmbim7 protein_coding protein_coding MGP_BALBcJ_T0069987.1 MGP_BALBcJ_G0029243.1 mouse_genomes_project 5 584007 605859 + MGP_BALBcJ_P0069987 Tmbim7 protein_coding protein_coding MGP_BALBcJ_T0069988.1 MGP_BALBcJ_G0029243.1 mouse_genomes_project 5 584182 594050 + Tmbim7 protein_coding retained_intron MGP_BALBcJ_T0069989.1 MGP_BALBcJ_G0029243.1 mouse_genomes_project 5 584183 605987 + MGP_BALBcJ_P0069989 Tmbim7 protein_coding protein_coding MGP_BALBcJ_T0069990.1 MGP_BALBcJ_G0029243.1 mouse_genomes_project 5 588703 606768 + MGP_BALBcJ_P0069990 Tmbim7 protein_coding protein_coding MGP_BALBcJ_T0001541.1 MGP_BALBcJ_G0001459.1 mouse_genomes_project 5 43184150 43187275 + TEC TEC MGP_BALBcJ_T0008389.1 MGP_BALBcJ_G0006802.1 mouse_genomes_project 5 135559444 135578877 - Gm43091 lincRNA lincRNA MGP_BALBcJ_T0070761.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28578692 28590673 - MGP_BALBcJ_P0070761 Slc5a6 protein_coding protein_coding MGP_BALBcJ_T0070762.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28578692 28591595 - MGP_BALBcJ_P0070762 Slc5a6 protein_coding protein_coding MGP_BALBcJ_T0070763.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28578692 28591233 - MGP_BALBcJ_P0070763 Slc5a6 protein_coding protein_coding MGP_BALBcJ_T0070764.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28578693 28590680 - MGP_BALBcJ_P0070764 Slc5a6 protein_coding protein_coding MGP_BALBcJ_T0070765.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28579543 28580650 - Slc5a6 protein_coding retained_intron MGP_BALBcJ_T0070766.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28582007 28585259 - MGP_BALBcJ_P0070766 Slc5a6 protein_coding protein_coding MGP_BALBcJ_T0070767.1 MGP_BALBcJ_G0029382.1 mouse_genomes_project 5 28585748 28590750 - MGP_BALBcJ_P0070767 Slc5a6 protein_coding protein_coding MGP_BALBcJ_T0072083.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70686193 70800513 - MGP_BALBcJ_P0072083 Tec protein_coding protein_coding MGP_BALBcJ_T0072084.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70686200 70800528 - MGP_BALBcJ_P0072084 Tec protein_coding protein_coding MGP_BALBcJ_T0072085.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70686211 70800465 - MGP_BALBcJ_P0072085 Tec protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072086.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70686215 70800515 - MGP_BALBcJ_P0072086 Tec protein_coding protein_coding MGP_BALBcJ_T0072087.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70686215 70800552 - MGP_BALBcJ_P0072087 Tec protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072088.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70686215 70717118 - MGP_BALBcJ_P0072088 Tec protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072089.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70703674 70800518 - MGP_BALBcJ_P0072089 Tec protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072090.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70754401 70800512 - Tec protein_coding retained_intron MGP_BALBcJ_T0072091.1 MGP_BALBcJ_G0029593.1 mouse_genomes_project 5 70754705 70776269 - MGP_BALBcJ_P0072091 Tec protein_coding protein_coding MGP_BALBcJ_T0071941.1 MGP_BALBcJ_G0029567.1 mouse_genomes_project 5 64620402 64631476 + MGP_BALBcJ_P0071941 Uchl1 protein_coding protein_coding MGP_BALBcJ_T0071942.1 MGP_BALBcJ_G0029567.1 mouse_genomes_project 5 64620553 64621159 + Uchl1 protein_coding retained_intron MGP_BALBcJ_T0071943.1 MGP_BALBcJ_G0029567.1 mouse_genomes_project 5 64621205 64631471 + Uchl1 protein_coding retained_intron MGP_BALBcJ_T0071944.1 MGP_BALBcJ_G0029567.1 mouse_genomes_project 5 64627936 64631180 + Uchl1 protein_coding retained_intron MGP_BALBcJ_T0015129.1 MGP_BALBcJ_G0013226.1 mouse_genomes_project 5 124281059 124281423 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069997.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 727332 765791 + Krit1 protein_coding retained_intron MGP_BALBcJ_T0069998.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 727332 765866 + MGP_BALBcJ_P0069998 Krit1 protein_coding protein_coding MGP_BALBcJ_T0069999.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 727333 735859 + Krit1 protein_coding retained_intron MGP_BALBcJ_T0070000.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 727337 765866 + MGP_BALBcJ_P0070000 Krit1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070001.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 727338 770071 + MGP_BALBcJ_P0070001 Krit1 protein_coding protein_coding MGP_BALBcJ_T0070002.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 727553 768810 + MGP_BALBcJ_P0070002 Krit1 protein_coding protein_coding MGP_BALBcJ_T0070003.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 728388 733852 + MGP_BALBcJ_P0070003 Krit1 protein_coding protein_coding MGP_BALBcJ_T0070004.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 729441 735652 + Krit1 protein_coding retained_intron MGP_BALBcJ_T0070005.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 736920 742712 + Krit1 protein_coding retained_intron MGP_BALBcJ_T0070006.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 739833 744089 + Krit1 protein_coding retained_intron MGP_BALBcJ_T0070007.1 MGP_BALBcJ_G0029245.1 mouse_genomes_project 5 747294 749208 + Krit1 protein_coding retained_intron MGP_BALBcJ_T0004665.1 MGP_BALBcJ_G0004038.1 mouse_genomes_project 5 41552095 41552770 - Gm16015 antisense antisense MGP_BALBcJ_T0014919.1 MGP_BALBcJ_G0013016.1 mouse_genomes_project 5 31739559 31740016 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001852.1 MGP_BALBcJ_G0001766.1 mouse_genomes_project 5 131728824 131729572 - TEC TEC MGP_BALBcJ_T0004749.1 MGP_BALBcJ_G0004102.1 mouse_genomes_project 5 109678581 109679175 - Gm43137 antisense antisense MGP_BALBcJ_T0008112.1 MGP_BALBcJ_G0006610.1 mouse_genomes_project 5 50257219 50268689 - 8030423F21Rik lincRNA lincRNA MGP_BALBcJ_T0098962.1 MGP_BALBcJ_G0037009.1 mouse_genomes_project 5 31905917 31908031 - Gm15513 sense_intronic sense_intronic MGP_BALBcJ_T0074841.1 MGP_BALBcJ_G0030137.1 mouse_genomes_project 5 134439751 134454916 + Rfc2 protein_coding processed_transcript MGP_BALBcJ_T0074842.1 MGP_BALBcJ_G0030137.1 mouse_genomes_project 5 134445332 134465524 + MGP_BALBcJ_P0074842 Rfc2 protein_coding protein_coding MGP_BALBcJ_T0074843.1 MGP_BALBcJ_G0030137.1 mouse_genomes_project 5 134445399 134455353 + Rfc2 protein_coding retained_intron MGP_BALBcJ_T0074844.1 MGP_BALBcJ_G0030137.1 mouse_genomes_project 5 134455238 134461674 + MGP_BALBcJ_P0074844 Rfc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074845.1 MGP_BALBcJ_G0030137.1 mouse_genomes_project 5 134456423 134459031 + Rfc2 protein_coding retained_intron MGP_BALBcJ_T0074846.1 MGP_BALBcJ_G0030137.1 mouse_genomes_project 5 134457837 134462047 + Rfc2 protein_coding retained_intron MGP_BALBcJ_T0071501.1 MGP_BALBcJ_G0029495.1 mouse_genomes_project 5 39431059 39434078 - MGP_BALBcJ_P0071501 Nkx3-2 protein_coding protein_coding MGP_BALBcJ_T0073919.1 MGP_BALBcJ_G0029985.1 mouse_genomes_project 5 120291483 120297383 - MGP_BALBcJ_P0073919 Cfap73 protein_coding protein_coding MGP_BALBcJ_T0074297.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123308788 123321189 - MGP_BALBcJ_P0074297 Diablo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074298.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123309165 123322476 - MGP_BALBcJ_P0074298 Diablo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074299.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123309593 123321167 - MGP_BALBcJ_P0074299 Diablo protein_coding protein_coding MGP_BALBcJ_T0074300.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123312893 123321183 - MGP_BALBcJ_P0074300 Diablo protein_coding protein_coding MGP_BALBcJ_T0074301.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123313348 123321180 - MGP_BALBcJ_P0074301 Diablo protein_coding protein_coding MGP_BALBcJ_T0074302.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123314671 123321180 - MGP_BALBcJ_P0074302 Diablo protein_coding protein_coding MGP_BALBcJ_T0074303.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123315022 123320542 - Diablo protein_coding retained_intron MGP_BALBcJ_T0074304.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123315123 123317841 - Diablo protein_coding retained_intron MGP_BALBcJ_T0074305.1 MGP_BALBcJ_G0030050.1 mouse_genomes_project 5 123321544 123322535 - Diablo protein_coding processed_transcript MGP_BALBcJ_T0073787.1 MGP_BALBcJ_G0029958.1 mouse_genomes_project 5 116697556 116722245 - MGP_BALBcJ_P0073787 Suds3 protein_coding protein_coding MGP_BALBcJ_T0073788.1 MGP_BALBcJ_G0029958.1 mouse_genomes_project 5 116697561 116710346 - Suds3 protein_coding retained_intron MGP_BALBcJ_T0073789.1 MGP_BALBcJ_G0029958.1 mouse_genomes_project 5 116698313 116722360 - MGP_BALBcJ_P0073789 Suds3 protein_coding protein_coding MGP_BALBcJ_T0073790.1 MGP_BALBcJ_G0029958.1 mouse_genomes_project 5 116700834 116704686 - Suds3 protein_coding retained_intron MGP_BALBcJ_T0073791.1 MGP_BALBcJ_G0029958.1 mouse_genomes_project 5 116711232 116719798 - Suds3 protein_coding retained_intron MGP_BALBcJ_T0073792.1 MGP_BALBcJ_G0029958.1 mouse_genomes_project 5 116711238 116715796 - Suds3 protein_coding retained_intron MGP_BALBcJ_T0070339.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19264101 19722346 - MGP_BALBcJ_P0070339 Reln protein_coding protein_coding MGP_BALBcJ_T0070340.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19264542 19276212 - Reln protein_coding processed_transcript MGP_BALBcJ_T0070341.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19264897 19722334 - MGP_BALBcJ_P0070341 Reln protein_coding protein_coding MGP_BALBcJ_T0070342.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19270301 19274040 - Reln protein_coding retained_intron MGP_BALBcJ_T0070343.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19275048 19279190 - Reln protein_coding processed_transcript MGP_BALBcJ_T0070344.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19275776 19276132 - Reln protein_coding retained_intron MGP_BALBcJ_T0070345.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19278867 19313808 - Reln protein_coding retained_intron MGP_BALBcJ_T0070346.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19357087 19390803 - Reln protein_coding retained_intron MGP_BALBcJ_T0070347.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19383571 19722334 - Reln protein_coding retained_intron MGP_BALBcJ_T0070348.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19428329 19429559 - Reln protein_coding retained_intron MGP_BALBcJ_T0070349.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19441118 19513867 - MGP_BALBcJ_P0070349 Reln protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070350.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19507270 19722334 - Reln protein_coding retained_intron MGP_BALBcJ_T0070351.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19550153 19722334 - Reln protein_coding retained_intron MGP_BALBcJ_T0070352.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19600419 19722334 - Reln protein_coding retained_intron MGP_BALBcJ_T0070353.1 MGP_BALBcJ_G0029303.1 mouse_genomes_project 5 19719714 19722346 - Reln protein_coding processed_transcript MGP_BALBcJ_T0074467.1 MGP_BALBcJ_G0030072.1 mouse_genomes_project 5 124271875 124286995 - MGP_BALBcJ_P0074467 Rilpl2 protein_coding protein_coding MGP_BALBcJ_T0074468.1 MGP_BALBcJ_G0030072.1 mouse_genomes_project 5 124283878 124286939 - Rilpl2 protein_coding retained_intron MGP_BALBcJ_T0004645.1 MGP_BALBcJ_G0004022.1 mouse_genomes_project 5 30115204 30189440 - antisense antisense MGP_BALBcJ_T0071674.1 MGP_BALBcJ_G0029524.1 mouse_genomes_project 5 50290327 50320230 - MGP_BALBcJ_P0071674 Sepsecs protein_coding protein_coding MGP_BALBcJ_T0071675.1 MGP_BALBcJ_G0029524.1 mouse_genomes_project 5 50290327 50320230 - MGP_BALBcJ_P0071675 Sepsecs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071676.1 MGP_BALBcJ_G0029524.1 mouse_genomes_project 5 50291416 50316092 - MGP_BALBcJ_P0071676 Sepsecs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071677.1 MGP_BALBcJ_G0029524.1 mouse_genomes_project 5 50296881 50298720 - Sepsecs protein_coding retained_intron MGP_BALBcJ_T0071678.1 MGP_BALBcJ_G0029524.1 mouse_genomes_project 5 50306251 50320135 - MGP_BALBcJ_P0071678 Sepsecs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070481.1 MGP_BALBcJ_G0029325.1 mouse_genomes_project 5 22022536 22030297 - MGP_BALBcJ_P0070481 Asb10 protein_coding protein_coding MGP_BALBcJ_T0070482.1 MGP_BALBcJ_G0029325.1 mouse_genomes_project 5 22023472 22030818 - MGP_BALBcJ_P0070482 Asb10 protein_coding protein_coding MGP_BALBcJ_T0070483.1 MGP_BALBcJ_G0029325.1 mouse_genomes_project 5 22023490 22030432 - MGP_BALBcJ_P0070483 Asb10 protein_coding protein_coding MGP_BALBcJ_T0001665.1 MGP_BALBcJ_G0001581.1 mouse_genomes_project 5 65771837 65773133 - TEC TEC MGP_BALBcJ_T0001724.1 MGP_BALBcJ_G0001639.1 mouse_genomes_project 5 96697560 96699991 + TEC TEC MGP_BALBcJ_T0004646.1 MGP_BALBcJ_G0004023.1 mouse_genomes_project 5 31803244 31820407 + 4930557J02Rik antisense antisense MGP_BALBcJ_T0014893.1 MGP_BALBcJ_G0012990.1 mouse_genomes_project 5 24347622 24348028 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011575.1 MGP_BALBcJ_G0009700.1 mouse_genomes_project 5 77764400 77764695 - Gm22553 misc_RNA misc_RNA MGP_BALBcJ_T0001727.1 MGP_BALBcJ_G0001642.1 mouse_genomes_project 5 99521491 99523788 + TEC TEC MGP_BALBcJ_T0073105.1 MGP_BALBcJ_G0029824.1 mouse_genomes_project 5 106896289 106970909 - MGP_BALBcJ_P0073105 Fam69a protein_coding protein_coding MGP_BALBcJ_T0073106.1 MGP_BALBcJ_G0029824.1 mouse_genomes_project 5 106897939 106970856 - MGP_BALBcJ_P0073106 Fam69a protein_coding protein_coding MGP_BALBcJ_T0073107.1 MGP_BALBcJ_G0029824.1 mouse_genomes_project 5 106902760 106956617 - MGP_BALBcJ_P0073107 Fam69a protein_coding protein_coding MGP_BALBcJ_T0015024.1 MGP_BALBcJ_G0013121.1 mouse_genomes_project 5 82805346 82806463 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070453.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21924345 21931100 - MGP_BALBcJ_P0070453 Fastk protein_coding protein_coding MGP_BALBcJ_T0070454.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21924346 21931092 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070456.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21926944 21928121 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070457.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21926944 21931193 - MGP_BALBcJ_P0070457 Fastk protein_coding protein_coding MGP_BALBcJ_T0070458.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21926944 21931112 - MGP_BALBcJ_P0070458 Fastk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070459.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21926945 21931093 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070460.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21926945 21927430 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070461.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21926948 21931114 - MGP_BALBcJ_P0070461 Fastk protein_coding protein_coding MGP_BALBcJ_T0070462.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21927433 21928007 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070463.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21927525 21928204 - Fastk protein_coding processed_transcript MGP_BALBcJ_T0070464.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21927829 21929864 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070465.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21927976 21931144 - Fastk protein_coding processed_transcript MGP_BALBcJ_T0070466.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21929206 21931114 - Fastk protein_coding retained_intron MGP_BALBcJ_T0070467.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21929274 21931103 - Fastk protein_coding processed_transcript MGP_BALBcJ_T0070468.1 MGP_BALBcJ_G0029321.1 mouse_genomes_project 5 21929836 21931103 - Fastk protein_coding processed_transcript MGP_BALBcJ_T0070737.1 MGP_BALBcJ_G0029376.1 mouse_genomes_project 5 28449207 28451111 - MGP_BALBcJ_P0070737 Ost4 protein_coding protein_coding MGP_BALBcJ_T0070738.1 MGP_BALBcJ_G0029376.1 mouse_genomes_project 5 28449840 28451048 - MGP_BALBcJ_P0070738 Ost4 protein_coding protein_coding MGP_BALBcJ_T0014997.1 MGP_BALBcJ_G0013094.1 mouse_genomes_project 5 69922911 69923682 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075571.1 MGP_BALBcJ_G0030288.1 mouse_genomes_project 5 140737033 140745237 + MGP_BALBcJ_P0075571 Lfng protein_coding protein_coding MGP_BALBcJ_T0075572.1 MGP_BALBcJ_G0030288.1 mouse_genomes_project 5 140741200 140743024 + Lfng protein_coding processed_transcript MGP_BALBcJ_T0075573.1 MGP_BALBcJ_G0030288.1 mouse_genomes_project 5 140741376 140744366 + Lfng protein_coding retained_intron MGP_BALBcJ_T0001451.1 MGP_BALBcJ_G0001372.1 mouse_genomes_project 5 10900490 10902347 - TEC TEC MGP_BALBcJ_T0001767.1 MGP_BALBcJ_G0001682.1 mouse_genomes_project 5 113613462 113615315 + TEC TEC MGP_BALBcJ_T0070305.1 MGP_BALBcJ_G0029295.1 mouse_genomes_project 5 18858028 19022348 - MGP_BALBcJ_P0070305 Fbxl13 protein_coding protein_coding MGP_BALBcJ_T0070306.1 MGP_BALBcJ_G0029295.1 mouse_genomes_project 5 18864381 19022330 - Fbxl13 protein_coding retained_intron MGP_BALBcJ_T0070307.1 MGP_BALBcJ_G0029295.1 mouse_genomes_project 5 18893926 19022300 - MGP_BALBcJ_P0070307 Fbxl13 protein_coding protein_coding MGP_BALBcJ_T0070310.1 MGP_BALBcJ_G0029295.1 mouse_genomes_project 5 18957997 18962110 - Fbxl13 protein_coding processed_transcript MGP_BALBcJ_T0070311.1 MGP_BALBcJ_G0029295.1 mouse_genomes_project 5 19020288 19022377 - Fbxl13 protein_coding retained_intron MGP_BALBcJ_T0011570.1 MGP_BALBcJ_G0009695.1 mouse_genomes_project 5 22680476 22680759 - Gm26356 misc_RNA misc_RNA MGP_BALBcJ_T0075307.1 MGP_BALBcJ_G0030224.1 mouse_genomes_project 5 137791630 137805252 - MGP_BALBcJ_P0075307 Pilra protein_coding protein_coding MGP_BALBcJ_T0075308.1 MGP_BALBcJ_G0030224.1 mouse_genomes_project 5 137791865 137800403 - Pilra protein_coding retained_intron MGP_BALBcJ_T0075309.1 MGP_BALBcJ_G0030224.1 mouse_genomes_project 5 137791941 137805235 - MGP_BALBcJ_P0075309 Pilra protein_coding protein_coding MGP_BALBcJ_T0075310.1 MGP_BALBcJ_G0030224.1 mouse_genomes_project 5 137804321 137805171 - MGP_BALBcJ_P0075310 Pilra protein_coding protein_coding MGP_BALBcJ_T0014975.1 MGP_BALBcJ_G0013072.1 mouse_genomes_project 5 59434664 59435133 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099965.1 MGP_BALBcJ_G0038001.1 mouse_genomes_project 5 117592372 117592479 - Gm25343 snRNA snRNA MGP_BALBcJ_T0073778.1 MGP_BALBcJ_G0029954.1 mouse_genomes_project 5 115622175 115669121 - MGP_BALBcJ_P0073778 Tmem233 protein_coding protein_coding MGP_BALBcJ_T0001628.1 MGP_BALBcJ_G0001544.1 mouse_genomes_project 5 63320677 63323054 - TEC TEC MGP_BALBcJ_T0070399.1 MGP_BALBcJ_G0029310.1 mouse_genomes_project 5 21309880 21315106 - MGP_BALBcJ_P0070399 Tomm7 protein_coding protein_coding MGP_BALBcJ_T0001802.1 MGP_BALBcJ_G0001717.1 mouse_genomes_project 5 121930552 121932890 + TEC TEC MGP_BALBcJ_T0070660.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27814653 27854458 + MGP_BALBcJ_P0070660 protein_coding protein_coding MGP_BALBcJ_T0070661.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27814707 27816746 + protein_coding retained_intron MGP_BALBcJ_T0070662.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27814712 27833137 + protein_coding retained_intron MGP_BALBcJ_T0070663.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27814719 27840541 + protein_coding retained_intron MGP_BALBcJ_T0070664.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27814722 27839780 + MGP_BALBcJ_P0070664 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070665.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27814746 27851004 + MGP_BALBcJ_P0070665 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070666.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27845094 27849024 + protein_coding retained_intron MGP_BALBcJ_T0070667.1 MGP_BALBcJ_G0029364.1 mouse_genomes_project 5 27845574 27849278 + protein_coding processed_transcript MGP_BALBcJ_T0099919.1 MGP_BALBcJ_G0037955.1 mouse_genomes_project 5 36367468 36367575 - Gm22779 snRNA snRNA MGP_BALBcJ_T0001865.1 MGP_BALBcJ_G0001779.1 mouse_genomes_project 5 132313845 132316005 - TEC TEC MGP_BALBcJ_T0071902.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63948896 64030584 - MGP_BALBcJ_P0071902 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071903.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63948896 64107129 - MGP_BALBcJ_P0071903 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071904.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63948903 64013590 - MGP_BALBcJ_P0071904 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071905.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63948904 64085842 - MGP_BALBcJ_P0071905 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071906.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63950948 64084996 - MGP_BALBcJ_P0071906 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071907.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63950948 64084996 - MGP_BALBcJ_P0071907 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071908.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63951326 64013689 - MGP_BALBcJ_P0071908 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071909.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63957898 64084874 - Rbm47 protein_coding retained_intron MGP_BALBcJ_T0071910.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63959070 63987046 - MGP_BALBcJ_P0071910 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071911.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63959313 64014580 - Rbm47 protein_coding processed_transcript MGP_BALBcJ_T0071912.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63959505 64013574 - MGP_BALBcJ_P0071912 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071913.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63959525 64085241 - MGP_BALBcJ_P0071913 Rbm47 protein_coding protein_coding MGP_BALBcJ_T0071914.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63978758 64085706 - Rbm47 protein_coding processed_transcript MGP_BALBcJ_T0071915.1 MGP_BALBcJ_G0029564.1 mouse_genomes_project 5 63978873 64085700 - Rbm47 protein_coding processed_transcript MGP_BALBcJ_T0072393.1 MGP_BALBcJ_G0029648.1 mouse_genomes_project 5 84696430 84812025 - MGP_BALBcJ_P0072393 Tmprss11f protein_coding protein_coding MGP_BALBcJ_T0072394.1 MGP_BALBcJ_G0029648.1 mouse_genomes_project 5 84740133 84812025 - Tmprss11f protein_coding processed_transcript MGP_BALBcJ_T0072395.1 MGP_BALBcJ_G0029648.1 mouse_genomes_project 5 84768751 84811984 - Tmprss11f protein_coding retained_intron MGP_BALBcJ_T0004718.1 MGP_BALBcJ_G0004082.1 mouse_genomes_project 5 95113244 95114599 - Gm33050 antisense antisense MGP_BALBcJ_T0008229.1 MGP_BALBcJ_G0006700.1 mouse_genomes_project 5 105050380 105058990 + Gm32736 lincRNA lincRNA MGP_BALBcJ_T0099911.1 MGP_BALBcJ_G0037947.1 mouse_genomes_project 5 27033210 27033317 - Gm24538 snRNA snRNA MGP_BALBcJ_T0014847.1 MGP_BALBcJ_G0012944.1 mouse_genomes_project 5 13712286 13713070 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014932.1 MGP_BALBcJ_G0013029.1 mouse_genomes_project 5 39101707 39102176 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074608.1 MGP_BALBcJ_G0030101.1 mouse_genomes_project 5 128909216 129029783 + MGP_BALBcJ_P0074608 Adgrd1 protein_coding protein_coding MGP_BALBcJ_T0074609.1 MGP_BALBcJ_G0030101.1 mouse_genomes_project 5 128909223 128913359 + Adgrd1 protein_coding retained_intron MGP_BALBcJ_T0074610.1 MGP_BALBcJ_G0030101.1 mouse_genomes_project 5 128909223 129028859 + MGP_BALBcJ_P0074610 Adgrd1 protein_coding protein_coding MGP_BALBcJ_T0008439.1 MGP_BALBcJ_G0006843.1 mouse_genomes_project 5 149594254 149603532 + Gm42788 lincRNA lincRNA MGP_BALBcJ_T0014870.1 MGP_BALBcJ_G0012967.1 mouse_genomes_project 5 19935921 19936217 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008417.1 MGP_BALBcJ_G0006824.1 mouse_genomes_project 5 146560902 146562441 - Gm43625 lincRNA lincRNA MGP_BALBcJ_T0001683.1 MGP_BALBcJ_G0001598.1 mouse_genomes_project 5 71154469 71156931 - TEC TEC MGP_BALBcJ_T0008252.1 MGP_BALBcJ_G0006718.1 mouse_genomes_project 5 109973054 109983470 + A630023P12Rik lincRNA lincRNA MGP_BALBcJ_T0008253.1 MGP_BALBcJ_G0006718.1 mouse_genomes_project 5 109973075 109973654 + A630023P12Rik lincRNA lincRNA MGP_BALBcJ_T0008254.1 MGP_BALBcJ_G0006718.1 mouse_genomes_project 5 109979051 109982624 + A630023P12Rik lincRNA lincRNA MGP_BALBcJ_T0008255.1 MGP_BALBcJ_G0006718.1 mouse_genomes_project 5 109979087 109979986 + A630023P12Rik lincRNA lincRNA MGP_BALBcJ_T0008256.1 MGP_BALBcJ_G0006718.1 mouse_genomes_project 5 109979118 109983478 + A630023P12Rik lincRNA lincRNA MGP_BALBcJ_T0015124.1 MGP_BALBcJ_G0013221.1 mouse_genomes_project 5 122062726 122063344 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008257.1 MGP_BALBcJ_G0006719.1 mouse_genomes_project 5 110120305 110121912 + Gm42595 lincRNA lincRNA MGP_BALBcJ_T0001780.1 MGP_BALBcJ_G0001695.1 mouse_genomes_project 5 117126608 117127564 + TEC TEC MGP_BALBcJ_T0070326.1 MGP_BALBcJ_G0029300.1 mouse_genomes_project 5 19137017 19164613 - MGP_BALBcJ_P0070326 Dnajc2 protein_coding protein_coding MGP_BALBcJ_T0070327.1 MGP_BALBcJ_G0029300.1 mouse_genomes_project 5 19137019 19164481 - MGP_BALBcJ_P0070327 Dnajc2 protein_coding protein_coding MGP_BALBcJ_T0070328.1 MGP_BALBcJ_G0029300.1 mouse_genomes_project 5 19137026 19164599 - Dnajc2 protein_coding retained_intron MGP_BALBcJ_T0070329.1 MGP_BALBcJ_G0029300.1 mouse_genomes_project 5 19146104 19148673 - Dnajc2 protein_coding retained_intron MGP_BALBcJ_T0070330.1 MGP_BALBcJ_G0029300.1 mouse_genomes_project 5 19153054 19164583 - Dnajc2 protein_coding retained_intron MGP_BALBcJ_T0070331.1 MGP_BALBcJ_G0029300.1 mouse_genomes_project 5 19154039 19164614 - MGP_BALBcJ_P0070331 Dnajc2 protein_coding protein_coding MGP_BALBcJ_T0015149.1 MGP_BALBcJ_G0013246.1 mouse_genomes_project 5 137864530 137864765 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001472.1 MGP_BALBcJ_G0001393.1 mouse_genomes_project 5 21648490 21651086 + TEC TEC MGP_BALBcJ_T0071670.1 MGP_BALBcJ_G0029522.1 mouse_genomes_project 5 50022909 50121252 - MGP_BALBcJ_P0071670 Ccdc149 protein_coding protein_coding MGP_BALBcJ_T0071671.1 MGP_BALBcJ_G0029522.1 mouse_genomes_project 5 50022915 50121375 - MGP_BALBcJ_P0071671 Ccdc149 protein_coding protein_coding MGP_BALBcJ_T0098957.1 MGP_BALBcJ_G0037004.1 mouse_genomes_project 5 2316904 2319535 - Gm43727 sense_intronic sense_intronic MGP_BALBcJ_T0072471.1 MGP_BALBcJ_G0029671.1 mouse_genomes_project 5 86188914 86195790 + MGP_BALBcJ_P0072471 Csn3 protein_coding protein_coding MGP_BALBcJ_T0072472.1 MGP_BALBcJ_G0029671.1 mouse_genomes_project 5 86188942 86194060 + MGP_BALBcJ_P0072472 Csn3 protein_coding protein_coding MGP_BALBcJ_T0072473.1 MGP_BALBcJ_G0029671.1 mouse_genomes_project 5 86188947 86192497 + Csn3 protein_coding retained_intron MGP_BALBcJ_T0072474.1 MGP_BALBcJ_G0029671.1 mouse_genomes_project 5 86188962 86192497 + Csn3 protein_coding retained_intron MGP_BALBcJ_T0072475.1 MGP_BALBcJ_G0029671.1 mouse_genomes_project 5 86188970 86195390 + MGP_BALBcJ_P0072475 Csn3 protein_coding protein_coding MGP_BALBcJ_T0072476.1 MGP_BALBcJ_G0029671.1 mouse_genomes_project 5 86191053 86193183 + Csn3 protein_coding retained_intron MGP_BALBcJ_T0074728.1 MGP_BALBcJ_G0030125.1 mouse_genomes_project 5 130192677 130198698 - A330070K13Rik protein_coding antisense MGP_BALBcJ_T0074729.1 MGP_BALBcJ_G0030125.1 mouse_genomes_project 5 130192750 130198699 - MGP_BALBcJ_P0074729 A330070K13Rik protein_coding protein_coding MGP_BALBcJ_T0008084.1 MGP_BALBcJ_G0006586.1 mouse_genomes_project 5 35658423 35660803 + Gm42505 lincRNA lincRNA MGP_BALBcJ_T0075069.1 MGP_BALBcJ_G0030181.1 mouse_genomes_project 5 136071280 136091027 - MGP_BALBcJ_P0075069 Orai2 protein_coding protein_coding MGP_BALBcJ_T0075070.1 MGP_BALBcJ_G0030181.1 mouse_genomes_project 5 136071285 136090942 - MGP_BALBcJ_P0075070 Orai2 protein_coding protein_coding MGP_BALBcJ_T0075071.1 MGP_BALBcJ_G0030181.1 mouse_genomes_project 5 136074525 136090948 - MGP_BALBcJ_P0075071 Orai2 protein_coding protein_coding MGP_BALBcJ_T0075072.1 MGP_BALBcJ_G0030181.1 mouse_genomes_project 5 136086580 136090947 - Orai2 protein_coding retained_intron MGP_BALBcJ_T0101709.1 MGP_BALBcJ_G0039687.1 mouse_genomes_project 5 26764674 26765516 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0075535.1 MGP_BALBcJ_G0030277.1 mouse_genomes_project 5 139914081 139924823 - MGP_BALBcJ_P0075535 Tmem184a protein_coding protein_coding MGP_BALBcJ_T0075536.1 MGP_BALBcJ_G0030277.1 mouse_genomes_project 5 139916548 139925888 - MGP_BALBcJ_P0075536 Tmem184a protein_coding protein_coding MGP_BALBcJ_T0075537.1 MGP_BALBcJ_G0030277.1 mouse_genomes_project 5 139918863 139919577 - Tmem184a protein_coding retained_intron MGP_BALBcJ_T0075539.1 MGP_BALBcJ_G0030277.1 mouse_genomes_project 5 139920086 139925647 - MGP_BALBcJ_P0075539 Tmem184a protein_coding protein_coding MGP_BALBcJ_T0075540.1 MGP_BALBcJ_G0030277.1 mouse_genomes_project 5 139924587 139931915 - MGP_BALBcJ_P0075540 Tmem184a protein_coding protein_coding MGP_BALBcJ_T0008043.1 MGP_BALBcJ_G0006563.1 mouse_genomes_project 5 23021466 23022920 + 1700096K18Rik lincRNA lincRNA MGP_BALBcJ_T0015161.1 MGP_BALBcJ_G0013258.1 mouse_genomes_project 5 142787295 142787524 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075456.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139299989 139349825 + MGP_BALBcJ_P0075456 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075457.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139299995 139349780 + MGP_BALBcJ_P0075457 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075458.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300012 139349780 + MGP_BALBcJ_P0075458 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075459.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300019 139327437 + Sun1 protein_coding retained_intron MGP_BALBcJ_T0075460.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300019 139327438 + MGP_BALBcJ_P0075460 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075461.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300021 139322837 + MGP_BALBcJ_P0075461 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075462.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300023 139325696 + MGP_BALBcJ_P0075462 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075463.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300027 139315613 + Sun1 protein_coding retained_intron MGP_BALBcJ_T0075464.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300032 139348534 + MGP_BALBcJ_P0075464 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075465.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139300037 139325702 + MGP_BALBcJ_P0075465 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075466.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139311778 139312126 + Sun1 protein_coding processed_transcript MGP_BALBcJ_T0075467.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139311810 139324495 + MGP_BALBcJ_P0075467 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075468.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139311864 139348628 + MGP_BALBcJ_P0075468 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075469.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139312104 139324459 + MGP_BALBcJ_P0075469 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075470.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139322775 139329930 + Sun1 protein_coding processed_transcript MGP_BALBcJ_T0075471.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139324373 139329037 + MGP_BALBcJ_P0075471 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075472.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139325840 139334724 + MGP_BALBcJ_P0075472 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075473.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139330201 139333641 + Sun1 protein_coding retained_intron MGP_BALBcJ_T0075474.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139334675 139345352 + MGP_BALBcJ_P0075474 Sun1 protein_coding protein_coding MGP_BALBcJ_T0075475.1 MGP_BALBcJ_G0030263.1 mouse_genomes_project 5 139341447 139348491 + MGP_BALBcJ_P0075475 Sun1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099905.1 MGP_BALBcJ_G0037941.1 mouse_genomes_project 5 17640204 17640304 + Gm22755 snRNA snRNA MGP_BALBcJ_T0001901.1 MGP_BALBcJ_G0001814.1 mouse_genomes_project 5 149845465 149847103 + TEC TEC MGP_BALBcJ_T0071492.1 MGP_BALBcJ_G0029493.1 mouse_genomes_project 5 37260228 37400316 - MGP_BALBcJ_P0071492 Hs3st1 protein_coding protein_coding MGP_BALBcJ_T0071493.1 MGP_BALBcJ_G0029493.1 mouse_genomes_project 5 37260232 37291429 - MGP_BALBcJ_P0071493 Hs3st1 protein_coding protein_coding MGP_BALBcJ_T0071494.1 MGP_BALBcJ_G0029493.1 mouse_genomes_project 5 37261062 37292041 - MGP_BALBcJ_P0071494 Hs3st1 protein_coding protein_coding MGP_BALBcJ_T0071495.1 MGP_BALBcJ_G0029493.1 mouse_genomes_project 5 37261367 37291392 - MGP_BALBcJ_P0071495 Hs3st1 protein_coding protein_coding MGP_BALBcJ_T0075113.1 MGP_BALBcJ_G0030187.1 mouse_genomes_project 5 136838294 136843029 + MGP_BALBcJ_P0075113 Ift22 protein_coding protein_coding MGP_BALBcJ_T0075114.1 MGP_BALBcJ_G0030187.1 mouse_genomes_project 5 136838298 136842179 + MGP_BALBcJ_P0075114 Ift22 protein_coding protein_coding MGP_BALBcJ_T0075115.1 MGP_BALBcJ_G0030187.1 mouse_genomes_project 5 136838328 136845458 + MGP_BALBcJ_P0075115 Ift22 protein_coding protein_coding MGP_BALBcJ_T0075116.1 MGP_BALBcJ_G0030187.1 mouse_genomes_project 5 136840940 136841514 + Ift22 protein_coding retained_intron MGP_BALBcJ_T0070859.1 MGP_BALBcJ_G0029395.1 mouse_genomes_project 5 28747873 28765598 - MGP_BALBcJ_P0070859 Ppm1g protein_coding protein_coding MGP_BALBcJ_T0070860.1 MGP_BALBcJ_G0029395.1 mouse_genomes_project 5 28747877 28765720 - MGP_BALBcJ_P0070860 Ppm1g protein_coding protein_coding MGP_BALBcJ_T0070861.1 MGP_BALBcJ_G0029395.1 mouse_genomes_project 5 28748311 28750293 - Ppm1g protein_coding retained_intron MGP_BALBcJ_T0070863.1 MGP_BALBcJ_G0029395.1 mouse_genomes_project 5 28750301 28752875 - MGP_BALBcJ_P0070863 Ppm1g protein_coding protein_coding MGP_BALBcJ_T0070864.1 MGP_BALBcJ_G0029395.1 mouse_genomes_project 5 28763807 28765598 - Ppm1g protein_coding retained_intron MGP_BALBcJ_T0015036.1 MGP_BALBcJ_G0013133.1 mouse_genomes_project 5 86356816 86357195 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004696.1 MGP_BALBcJ_G0004063.1 mouse_genomes_project 5 65854196 65863604 - 4930425K10Rik antisense antisense MGP_BALBcJ_T0001698.1 MGP_BALBcJ_G0001613.1 mouse_genomes_project 5 73710039 73712364 + TEC TEC MGP_BALBcJ_T0008357.1 MGP_BALBcJ_G0006781.1 mouse_genomes_project 5 126292301 126293449 - Gm42592 lincRNA lincRNA MGP_BALBcJ_T0011567.1 MGP_BALBcJ_G0009692.1 mouse_genomes_project 5 6017580 6017722 - Gm27941 misc_RNA misc_RNA MGP_BALBcJ_T0101223.1 MGP_BALBcJ_G0039259.1 mouse_genomes_project 5 109774854 109775006 + Gm26277 snoRNA snoRNA MGP_BALBcJ_T0001671.1 MGP_BALBcJ_G0001587.1 mouse_genomes_project 5 67136405 67139259 - TEC TEC MGP_BALBcJ_T0014879.1 MGP_BALBcJ_G0012976.1 mouse_genomes_project 5 20845209 20845834 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004754.1 MGP_BALBcJ_G0004107.1 mouse_genomes_project 5 110843904 110844664 - Gm43118 antisense antisense MGP_BALBcJ_T0075538.1 MGP_BALBcJ_G0030278.1 mouse_genomes_project 5 139919574 139938698 - MGP_BALBcJ_P0075538 Gm26938 protein_coding protein_coding MGP_BALBcJ_T0072236.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74527863 74568908 + MGP_BALBcJ_P0072236 Exoc1 protein_coding protein_coding MGP_BALBcJ_T0072237.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74527875 74568899 + MGP_BALBcJ_P0072237 Exoc1 protein_coding protein_coding MGP_BALBcJ_T0072238.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74527880 74538288 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0072239.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74527896 74560274 + Exoc1 protein_coding processed_transcript MGP_BALBcJ_T0072240.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74527910 74539661 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0072241.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74527910 74568901 + MGP_BALBcJ_P0072241 Exoc1 protein_coding protein_coding MGP_BALBcJ_T0072242.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74540496 74548068 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0072243.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74551198 74554107 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0072244.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74558840 74565817 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0072245.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74559707 74566630 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0072246.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74559845 74565578 + MGP_BALBcJ_P0072246 Exoc1 protein_coding protein_coding MGP_BALBcJ_T0072247.1 MGP_BALBcJ_G0029622.1 mouse_genomes_project 5 74566495 74568603 + Exoc1 protein_coding retained_intron MGP_BALBcJ_T0015053.1 MGP_BALBcJ_G0013150.1 mouse_genomes_project 5 94818269 94818680 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008440.1 MGP_BALBcJ_G0006844.1 mouse_genomes_project 5 149637313 149639494 + lincRNA lincRNA MGP_BALBcJ_T0004687.1 MGP_BALBcJ_G0004056.1 mouse_genomes_project 5 64569494 64620810 - Uchl1os antisense antisense MGP_BALBcJ_T0004688.1 MGP_BALBcJ_G0004056.1 mouse_genomes_project 5 64599062 64620345 - Uchl1os antisense antisense MGP_BALBcJ_T0015086.1 MGP_BALBcJ_G0013183.1 mouse_genomes_project 5 107130151 107131833 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072559.1 MGP_BALBcJ_G0029700.1 mouse_genomes_project 5 88908231 88946555 + MGP_BALBcJ_P0072559 5830473C10Rik protein_coding protein_coding MGP_BALBcJ_T0072560.1 MGP_BALBcJ_G0029700.1 mouse_genomes_project 5 88908341 88925721 + MGP_BALBcJ_P0072560 5830473C10Rik protein_coding protein_coding MGP_BALBcJ_T0070681.1 MGP_BALBcJ_G0029368.1 mouse_genomes_project 5 28023661 28088768 - MGP_BALBcJ_P0070681 Cib4 protein_coding protein_coding MGP_BALBcJ_T0001550.1 MGP_BALBcJ_G0001468.1 mouse_genomes_project 5 45724817 45727415 + TEC TEC MGP_BALBcJ_T0074669.1 MGP_BALBcJ_G0030112.1 mouse_genomes_project 5 129691725 129694199 + protein_coding retained_intron MGP_BALBcJ_T0010675.1 MGP_BALBcJ_G0008800.1 mouse_genomes_project 5 85829716 85829808 - Mir3969 miRNA miRNA MGP_BALBcJ_T0072723.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94726548 94737894 - Cnot6l protein_coding retained_intron MGP_BALBcJ_T0072724.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94726561 94806343 - MGP_BALBcJ_P0072724 Cnot6l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072725.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94726709 94806343 - MGP_BALBcJ_P0072725 Cnot6l protein_coding protein_coding MGP_BALBcJ_T0072726.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94728152 94805976 - MGP_BALBcJ_P0072726 Cnot6l protein_coding protein_coding MGP_BALBcJ_T0072727.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94756421 94775640 - Cnot6l protein_coding retained_intron MGP_BALBcJ_T0072728.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94757110 94806330 - MGP_BALBcJ_P0072728 Cnot6l protein_coding protein_coding MGP_BALBcJ_T0072729.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94775640 94806459 - MGP_BALBcJ_P0072729 Cnot6l protein_coding protein_coding MGP_BALBcJ_T0072730.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94775676 94808504 - MGP_BALBcJ_P0072730 Cnot6l protein_coding protein_coding MGP_BALBcJ_T0072731.1 MGP_BALBcJ_G0029739.1 mouse_genomes_project 5 94775787 94806351 - MGP_BALBcJ_P0072731 Cnot6l protein_coding protein_coding MGP_BALBcJ_T0008329.1 MGP_BALBcJ_G0006767.1 mouse_genomes_project 5 120311279 120311989 + Gm15749 lincRNA lincRNA MGP_BALBcJ_T0004742.1 MGP_BALBcJ_G0004095.1 mouse_genomes_project 5 104766846 104771070 - Lrrc8dos antisense antisense MGP_BALBcJ_T0008287.1 MGP_BALBcJ_G0006736.1 mouse_genomes_project 5 113420525 113422106 - Gm42797 lincRNA lincRNA MGP_BALBcJ_T0008458.1 MGP_BALBcJ_G0006855.1 mouse_genomes_project 5 151096254 151104427 - Gm43597 lincRNA lincRNA MGP_BALBcJ_T0008459.1 MGP_BALBcJ_G0006855.1 mouse_genomes_project 5 151096259 151104390 - Gm43597 lincRNA lincRNA MGP_BALBcJ_T0008460.1 MGP_BALBcJ_G0006855.1 mouse_genomes_project 5 151098221 151104307 - Gm43597 lincRNA lincRNA MGP_BALBcJ_T0072648.1 MGP_BALBcJ_G0029726.1 mouse_genomes_project 5 90698216 90700441 - Cxcl10 protein_coding retained_intron MGP_BALBcJ_T0072649.1 MGP_BALBcJ_G0029726.1 mouse_genomes_project 5 90698216 90700456 - MGP_BALBcJ_P0072649 Cxcl10 protein_coding protein_coding MGP_BALBcJ_T0072650.1 MGP_BALBcJ_G0029726.1 mouse_genomes_project 5 90698383 90700463 - MGP_BALBcJ_P0072650 Cxcl10 protein_coding protein_coding MGP_BALBcJ_T0072651.1 MGP_BALBcJ_G0029726.1 mouse_genomes_project 5 90699574 90700456 - Cxcl10 protein_coding retained_intron MGP_BALBcJ_T0070273.1 MGP_BALBcJ_G0029288.1 mouse_genomes_project 5 18251351 18256031 + MGP_BALBcJ_P0070273 Tmem60 protein_coding protein_coding MGP_BALBcJ_T0070274.1 MGP_BALBcJ_G0029288.1 mouse_genomes_project 5 18251667 18253845 + Tmem60 protein_coding processed_transcript MGP_BALBcJ_T0001763.1 MGP_BALBcJ_G0001678.1 mouse_genomes_project 5 112808720 112809920 - TEC TEC MGP_BALBcJ_T0015025.1 MGP_BALBcJ_G0013122.1 mouse_genomes_project 5 83044751 83053041 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001791.1 MGP_BALBcJ_G0001706.1 mouse_genomes_project 5 119905395 119906542 + TEC TEC MGP_BALBcJ_T0075544.1 MGP_BALBcJ_G0030280.1 mouse_genomes_project 5 140023094 140090372 + MGP_BALBcJ_P0075544 Elfn1 protein_coding protein_coding MGP_BALBcJ_T0075545.1 MGP_BALBcJ_G0030280.1 mouse_genomes_project 5 140023625 140086698 + Elfn1 protein_coding processed_transcript MGP_BALBcJ_T0075900.1 MGP_BALBcJ_G0030358.1 mouse_genomes_project 5 146749653 146836048 + MGP_BALBcJ_P0075900 Wasf3 protein_coding protein_coding MGP_BALBcJ_T0072579.1 MGP_BALBcJ_G0029708.1 mouse_genomes_project 5 89270458 89272526 + MGP_BALBcJ_P0072579 Cxcl2 protein_coding protein_coding MGP_BALBcJ_T0072580.1 MGP_BALBcJ_G0029708.1 mouse_genomes_project 5 89270460 89272526 + Cxcl2 protein_coding retained_intron MGP_BALBcJ_T0072581.1 MGP_BALBcJ_G0029708.1 mouse_genomes_project 5 89270460 89270949 + Cxcl2 protein_coding retained_intron MGP_BALBcJ_T0072582.1 MGP_BALBcJ_G0029708.1 mouse_genomes_project 5 89270460 89272526 + MGP_BALBcJ_P0072582 Cxcl2 protein_coding protein_coding MGP_BALBcJ_T0073108.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050438 107091865 + Mtf2 protein_coding processed_transcript MGP_BALBcJ_T0073109.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050475 107092160 + MGP_BALBcJ_P0073109 Mtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073110.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050480 107092326 + Mtf2 protein_coding processed_transcript MGP_BALBcJ_T0073111.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050480 107092971 + Mtf2 protein_coding processed_transcript MGP_BALBcJ_T0073112.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050481 107054342 + Mtf2 protein_coding retained_intron MGP_BALBcJ_T0073113.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050493 107072126 + MGP_BALBcJ_P0073113 Mtf2 protein_coding protein_coding MGP_BALBcJ_T0073114.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050506 107091703 + MGP_BALBcJ_P0073114 Mtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073115.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050506 107092972 + MGP_BALBcJ_P0073115 Mtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073116.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050506 107093706 + MGP_BALBcJ_P0073116 Mtf2 protein_coding protein_coding MGP_BALBcJ_T0073117.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050508 107078938 + MGP_BALBcJ_P0073117 Mtf2 protein_coding protein_coding MGP_BALBcJ_T0073118.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050508 107091787 + MGP_BALBcJ_P0073118 Mtf2 protein_coding protein_coding MGP_BALBcJ_T0073119.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107050521 107072714 + Mtf2 protein_coding processed_transcript MGP_BALBcJ_T0073120.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107057678 107065928 + Mtf2 protein_coding processed_transcript MGP_BALBcJ_T0073121.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107062904 107092172 + Mtf2 protein_coding processed_transcript MGP_BALBcJ_T0073122.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107071753 107085533 + MGP_BALBcJ_P0073122 Mtf2 protein_coding protein_coding MGP_BALBcJ_T0073123.1 MGP_BALBcJ_G0029825.1 mouse_genomes_project 5 107076873 107088744 + MGP_BALBcJ_P0073123 Mtf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072147.1 MGP_BALBcJ_G0029604.1 mouse_genomes_project 5 71569062 71594897 - MGP_BALBcJ_P0072147 Lrrc66 protein_coding protein_coding MGP_BALBcJ_T0072148.1 MGP_BALBcJ_G0029604.1 mouse_genomes_project 5 71592066 71592703 - MGP_BALBcJ_P0072148 Lrrc66 protein_coding protein_coding MGP_BALBcJ_T0014973.1 MGP_BALBcJ_G0013070.1 mouse_genomes_project 5 58622167 58622936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015177.1 MGP_BALBcJ_G0013274.1 mouse_genomes_project 5 146168836 146169159 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098988.1 MGP_BALBcJ_G0037031.1 mouse_genomes_project 5 149888505 149890226 + 4933425D22Rik sense_intronic sense_intronic MGP_BALBcJ_T0001735.1 MGP_BALBcJ_G0001650.1 mouse_genomes_project 5 102795937 102798716 - TEC TEC MGP_BALBcJ_T0008105.1 MGP_BALBcJ_G0006603.1 mouse_genomes_project 5 42841198 42895819 - Gm43303 lincRNA lincRNA MGP_BALBcJ_T0008428.1 MGP_BALBcJ_G0006835.1 mouse_genomes_project 5 149259625 149276773 + Gm15407 lincRNA lincRNA MGP_BALBcJ_T0001617.1 MGP_BALBcJ_G0001534.1 mouse_genomes_project 5 57814598 57817224 - TEC TEC MGP_BALBcJ_T0075205.1 MGP_BALBcJ_G0030207.1 mouse_genomes_project 5 137447970 137458479 + MGP_BALBcJ_P0075205 protein_coding unknown_likely_coding MGP_BALBcJ_T0075206.1 MGP_BALBcJ_G0030207.1 mouse_genomes_project 5 137449092 137450921 + MGP_BALBcJ_P0075206 protein_coding protein_coding MGP_BALBcJ_T0099910.1 MGP_BALBcJ_G0037946.1 mouse_genomes_project 5 23001793 23001964 + Gm22656 snRNA snRNA MGP_BALBcJ_T0014873.1 MGP_BALBcJ_G0012970.1 mouse_genomes_project 5 20340301 20340918 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011574.1 MGP_BALBcJ_G0009699.1 mouse_genomes_project 5 64266453 64266776 - Gm23183 misc_RNA misc_RNA MGP_BALBcJ_T0099943.1 MGP_BALBcJ_G0037979.1 mouse_genomes_project 5 84410101 84410208 - Gm25473 snRNA snRNA MGP_BALBcJ_T0074480.1 MGP_BALBcJ_G0030076.1 mouse_genomes_project 5 124366684 124380449 + MGP_BALBcJ_P0074480 Ddx55 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074481.1 MGP_BALBcJ_G0030076.1 mouse_genomes_project 5 124366693 124382162 + MGP_BALBcJ_P0074481 Ddx55 protein_coding protein_coding MGP_BALBcJ_T0074482.1 MGP_BALBcJ_G0030076.1 mouse_genomes_project 5 124366711 124374545 + Ddx55 protein_coding processed_transcript MGP_BALBcJ_T0074483.1 MGP_BALBcJ_G0030076.1 mouse_genomes_project 5 124366773 124374601 + Ddx55 protein_coding processed_transcript MGP_BALBcJ_T0074484.1 MGP_BALBcJ_G0030076.1 mouse_genomes_project 5 124369476 124370905 + Ddx55 protein_coding retained_intron MGP_BALBcJ_T0074485.1 MGP_BALBcJ_G0030076.1 mouse_genomes_project 5 124375715 124380369 + Ddx55 protein_coding processed_transcript MGP_BALBcJ_T0070912.1 MGP_BALBcJ_G0029402.1 mouse_genomes_project 5 29056051 29069776 + MGP_BALBcJ_P0070912 protein_coding protein_coding MGP_BALBcJ_T0070913.1 MGP_BALBcJ_G0029402.1 mouse_genomes_project 5 29056055 29084873 + MGP_BALBcJ_P0070913 protein_coding protein_coding MGP_BALBcJ_T0070914.1 MGP_BALBcJ_G0029402.1 mouse_genomes_project 5 29056070 29076575 + MGP_BALBcJ_P0070914 protein_coding protein_coding MGP_BALBcJ_T0070915.1 MGP_BALBcJ_G0029402.1 mouse_genomes_project 5 29056136 29084868 + MGP_BALBcJ_P0070915 protein_coding protein_coding MGP_BALBcJ_T0070916.1 MGP_BALBcJ_G0029402.1 mouse_genomes_project 5 29068675 29075962 + MGP_BALBcJ_P0070916 protein_coding protein_coding MGP_BALBcJ_T0102579.1 MGP_BALBcJ_G0040395.1 mouse_genomes_project 5 125619072 125619737 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0075519.1 MGP_BALBcJ_G0030274.1 mouse_genomes_project 5 139815637 139845279 - MGP_BALBcJ_P0075519 Micall2 protein_coding protein_coding MGP_BALBcJ_T0075520.1 MGP_BALBcJ_G0030274.1 mouse_genomes_project 5 139815835 139819451 - Micall2 protein_coding retained_intron MGP_BALBcJ_T0075521.1 MGP_BALBcJ_G0030274.1 mouse_genomes_project 5 139819358 139820843 - MGP_BALBcJ_P0075521 Micall2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074887.1 MGP_BALBcJ_G0030147.1 mouse_genomes_project 5 134888406 134889053 + MGP_BALBcJ_P0074887 Abhd11 protein_coding protein_coding MGP_BALBcJ_T0074888.1 MGP_BALBcJ_G0030147.1 mouse_genomes_project 5 134888449 134891165 + MGP_BALBcJ_P0074888 Abhd11 protein_coding protein_coding MGP_BALBcJ_T0074889.1 MGP_BALBcJ_G0030147.1 mouse_genomes_project 5 134888684 134891165 + MGP_BALBcJ_P0074889 Abhd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074890.1 MGP_BALBcJ_G0030147.1 mouse_genomes_project 5 134888699 134891165 + MGP_BALBcJ_P0074890 Abhd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074891.1 MGP_BALBcJ_G0030147.1 mouse_genomes_project 5 134888705 134891171 + MGP_BALBcJ_P0074891 Abhd11 protein_coding protein_coding MGP_BALBcJ_T0074892.1 MGP_BALBcJ_G0030147.1 mouse_genomes_project 5 134888966 134890971 + MGP_BALBcJ_P0074892 Abhd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071257.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32742156 32749075 + MGP_BALBcJ_P0071257 Hgfac protein_coding protein_coding MGP_BALBcJ_T0071258.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32742224 32749112 + Hgfac protein_coding retained_intron MGP_BALBcJ_T0071259.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32742224 32744333 + MGP_BALBcJ_P0071259 Hgfac protein_coding protein_coding MGP_BALBcJ_T0071260.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32744257 32746097 + Hgfac protein_coding retained_intron MGP_BALBcJ_T0071261.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32744999 32747614 + MGP_BALBcJ_P0071261 Hgfac protein_coding protein_coding MGP_BALBcJ_T0071262.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32745476 32746562 + Hgfac protein_coding retained_intron MGP_BALBcJ_T0071263.1 MGP_BALBcJ_G0029451.1 mouse_genomes_project 5 32747215 32749057 + Hgfac protein_coding retained_intron MGP_BALBcJ_T0076059.1 MGP_BALBcJ_G0030389.1 mouse_genomes_project 5 150501432 150551119 + Rxfp2 protein_coding retained_intron MGP_BALBcJ_T0076060.1 MGP_BALBcJ_G0030389.1 mouse_genomes_project 5 150501432 150564571 + MGP_BALBcJ_P0076060 Rxfp2 protein_coding protein_coding MGP_BALBcJ_T0076061.1 MGP_BALBcJ_G0030389.1 mouse_genomes_project 5 150501432 150564571 + MGP_BALBcJ_P0076061 Rxfp2 protein_coding protein_coding MGP_BALBcJ_T0076062.1 MGP_BALBcJ_G0030389.1 mouse_genomes_project 5 150501463 150564563 + MGP_BALBcJ_P0076062 Rxfp2 protein_coding protein_coding MGP_BALBcJ_T0076063.1 MGP_BALBcJ_G0030389.1 mouse_genomes_project 5 150548941 150552441 + Rxfp2 protein_coding retained_intron MGP_BALBcJ_T0076064.1 MGP_BALBcJ_G0030389.1 mouse_genomes_project 5 150563919 150565417 + Rxfp2 protein_coding processed_transcript MGP_BALBcJ_T0073656.1 MGP_BALBcJ_G0029937.1 mouse_genomes_project 5 114799649 114804776 + MGP_BALBcJ_P0073656 Pop5 protein_coding protein_coding MGP_BALBcJ_T0073657.1 MGP_BALBcJ_G0029937.1 mouse_genomes_project 5 114801759 114804027 + Pop5 protein_coding processed_transcript MGP_BALBcJ_T0073658.1 MGP_BALBcJ_G0029937.1 mouse_genomes_project 5 114801812 114809148 + MGP_BALBcJ_P0073658 Pop5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073659.1 MGP_BALBcJ_G0029937.1 mouse_genomes_project 5 114801815 114804729 + Pop5 protein_coding processed_transcript MGP_BALBcJ_T0073660.1 MGP_BALBcJ_G0029937.1 mouse_genomes_project 5 114801827 114804452 + Pop5 protein_coding retained_intron MGP_BALBcJ_T0073661.1 MGP_BALBcJ_G0029937.1 mouse_genomes_project 5 114804125 114804751 + Pop5 protein_coding processed_transcript MGP_BALBcJ_T0101718.1 MGP_BALBcJ_G0039695.1 mouse_genomes_project 5 71348937 71349801 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101719.1 MGP_BALBcJ_G0039695.1 mouse_genomes_project 5 71348982 71359088 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101720.1 MGP_BALBcJ_G0039695.1 mouse_genomes_project 5 71358911 71359365 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0001530.1 MGP_BALBcJ_G0001448.1 mouse_genomes_project 5 41860907 41861722 + TEC TEC MGP_BALBcJ_T0073063.1 MGP_BALBcJ_G0029817.1 mouse_genomes_project 5 106505502 106519161 + MGP_BALBcJ_P0073063 1700028K03Rik protein_coding protein_coding MGP_BALBcJ_T0073064.1 MGP_BALBcJ_G0029817.1 mouse_genomes_project 5 106505513 106522083 + 1700028K03Rik protein_coding processed_transcript MGP_BALBcJ_T0073065.1 MGP_BALBcJ_G0029817.1 mouse_genomes_project 5 106505530 106519997 + MGP_BALBcJ_P0073065 1700028K03Rik protein_coding protein_coding MGP_BALBcJ_T0073066.1 MGP_BALBcJ_G0029817.1 mouse_genomes_project 5 106505550 106519805 + 1700028K03Rik protein_coding retained_intron MGP_BALBcJ_T0001811.1 MGP_BALBcJ_G0001726.1 mouse_genomes_project 5 122878709 122880274 + TEC TEC MGP_BALBcJ_T0008041.1 MGP_BALBcJ_G0006561.1 mouse_genomes_project 5 22477735 22490508 + 1500035N22Rik lincRNA lincRNA MGP_BALBcJ_T0010717.1 MGP_BALBcJ_G0008842.1 mouse_genomes_project 5 139876853 139876918 - Mir7037 miRNA miRNA MGP_BALBcJ_T0073216.1 MGP_BALBcJ_G0029852.1 mouse_genomes_project 5 108860942 108891569 - MGP_BALBcJ_P0073216 5430403G16Rik protein_coding protein_coding MGP_BALBcJ_T0001512.1 MGP_BALBcJ_G0001430.1 mouse_genomes_project 5 34845029 34847875 + TEC TEC MGP_BALBcJ_T0070240.1 MGP_BALBcJ_G0029281.1 mouse_genomes_project 5 14835110 14837643 + MGP_BALBcJ_P0070240 protein_coding protein_coding MGP_BALBcJ_T0004628.1 MGP_BALBcJ_G0004009.1 mouse_genomes_project 5 21819320 21822614 + Gm15589 antisense antisense MGP_BALBcJ_T0014829.1 MGP_BALBcJ_G0012926.1 mouse_genomes_project 5 4886162 4886902 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072263.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74876321 74908970 - MGP_BALBcJ_P0072263 Aasdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072264.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74878597 74879330 - Aasdh protein_coding processed_transcript MGP_BALBcJ_T0072265.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74878597 74909057 - MGP_BALBcJ_P0072265 Aasdh protein_coding protein_coding MGP_BALBcJ_T0072266.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74878602 74909056 - MGP_BALBcJ_P0072266 Aasdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072267.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74878648 74905520 - MGP_BALBcJ_P0072267 Aasdh protein_coding protein_coding MGP_BALBcJ_T0072268.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74878686 74909059 - MGP_BALBcJ_P0072268 Aasdh protein_coding unknown_likely_coding MGP_BALBcJ_T0072269.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74878830 74885160 - MGP_BALBcJ_P0072269 Aasdh protein_coding protein_coding MGP_BALBcJ_T0072270.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74882669 74909035 - Aasdh protein_coding retained_intron MGP_BALBcJ_T0072271.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74885616 74909030 - MGP_BALBcJ_P0072271 Aasdh protein_coding protein_coding MGP_BALBcJ_T0072272.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74885631 74887429 - Aasdh protein_coding retained_intron MGP_BALBcJ_T0072273.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74895953 74898411 - Aasdh protein_coding retained_intron MGP_BALBcJ_T0072274.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74897782 74909035 - Aasdh protein_coding processed_transcript MGP_BALBcJ_T0072275.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74899574 74909035 - Aasdh protein_coding retained_intron MGP_BALBcJ_T0072276.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74905338 74908933 - MGP_BALBcJ_P0072276 Aasdh protein_coding protein_coding MGP_BALBcJ_T0072277.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74905427 74909046 - MGP_BALBcJ_P0072277 Aasdh protein_coding protein_coding MGP_BALBcJ_T0072278.1 MGP_BALBcJ_G0029625.1 mouse_genomes_project 5 74907872 74908971 - Aasdh protein_coding processed_transcript MGP_BALBcJ_T0010688.1 MGP_BALBcJ_G0008813.1 mouse_genomes_project 5 113906740 113906812 + Mir7027 miRNA miRNA MGP_BALBcJ_T0071021.1 MGP_BALBcJ_G0029417.1 mouse_genomes_project 5 30690887 30693068 + protein_coding retained_intron MGP_BALBcJ_T0072966.1 MGP_BALBcJ_G0029796.1 mouse_genomes_project 5 103855308 104167665 - MGP_BALBcJ_P0072966 protein_coding protein_coding MGP_BALBcJ_T0072967.1 MGP_BALBcJ_G0029796.1 mouse_genomes_project 5 103855309 104167665 - protein_coding retained_intron MGP_BALBcJ_T0072972.1 MGP_BALBcJ_G0029796.1 mouse_genomes_project 5 104001357 104020851 - MGP_BALBcJ_P0072972 protein_coding protein_coding MGP_BALBcJ_T0072977.1 MGP_BALBcJ_G0029796.1 mouse_genomes_project 5 104043754 104050970 - protein_coding processed_transcript MGP_BALBcJ_T0014863.1 MGP_BALBcJ_G0012960.1 mouse_genomes_project 5 18990714 18991215 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001564.1 MGP_BALBcJ_G0001481.1 mouse_genomes_project 5 46646795 46648103 - TEC TEC MGP_BALBcJ_T0001840.1 MGP_BALBcJ_G0001754.1 mouse_genomes_project 5 130436578 130437006 - TEC TEC MGP_BALBcJ_T0074893.1 MGP_BALBcJ_G0030148.1 mouse_genomes_project 5 134905592 134933253 + MGP_BALBcJ_P0074893 Stx1a protein_coding protein_coding MGP_BALBcJ_T0074894.1 MGP_BALBcJ_G0030148.1 mouse_genomes_project 5 134905617 134927817 + MGP_BALBcJ_P0074894 Stx1a protein_coding protein_coding MGP_BALBcJ_T0074895.1 MGP_BALBcJ_G0030148.1 mouse_genomes_project 5 134905670 134933253 + MGP_BALBcJ_P0074895 Stx1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074896.1 MGP_BALBcJ_G0030148.1 mouse_genomes_project 5 134919422 134930981 + Stx1a protein_coding processed_transcript MGP_BALBcJ_T0074897.1 MGP_BALBcJ_G0030148.1 mouse_genomes_project 5 134922971 134933252 + Stx1a protein_coding retained_intron MGP_BALBcJ_T0074898.1 MGP_BALBcJ_G0030148.1 mouse_genomes_project 5 134923177 134931090 + Stx1a protein_coding processed_transcript MGP_BALBcJ_T0072418.1 MGP_BALBcJ_G0029658.1 mouse_genomes_project 5 85529880 85541864 - MGP_BALBcJ_P0072418 Ugt2a3 protein_coding protein_coding MGP_BALBcJ_T0010698.1 MGP_BALBcJ_G0008823.1 mouse_genomes_project 5 124234483 124234563 - Gm27486 miRNA miRNA MGP_BALBcJ_T0001836.1 MGP_BALBcJ_G0001750.1 mouse_genomes_project 5 129747429 129750801 + TEC TEC MGP_BALBcJ_T0072216.1 MGP_BALBcJ_G0029616.1 mouse_genomes_project 5 73918075 73964082 - MGP_BALBcJ_P0072216 Kdr protein_coding protein_coding MGP_BALBcJ_T0072217.1 MGP_BALBcJ_G0029616.1 mouse_genomes_project 5 73943119 73964082 - Kdr protein_coding retained_intron MGP_BALBcJ_T0072218.1 MGP_BALBcJ_G0029616.1 mouse_genomes_project 5 73947002 73964082 - Kdr protein_coding retained_intron MGP_BALBcJ_T0018122.1 MGP_BALBcJ_G0015541.1 mouse_genomes_project 5 65399762 65406696 + C330024D21Rik processed_transcript retained_intron MGP_BALBcJ_T0018123.1 MGP_BALBcJ_G0015541.1 mouse_genomes_project 5 65399765 65413721 + C330024D21Rik processed_transcript lincRNA MGP_BALBcJ_T0018124.1 MGP_BALBcJ_G0015541.1 mouse_genomes_project 5 65399768 65413387 + C330024D21Rik processed_transcript lincRNA MGP_BALBcJ_T0072596.1 MGP_BALBcJ_G0029715.1 mouse_genomes_project 5 90290337 90304473 - Rchy1 protein_coding processed_transcript MGP_BALBcJ_T0072597.1 MGP_BALBcJ_G0029715.1 mouse_genomes_project 5 90290337 90304985 - MGP_BALBcJ_P0072597 Rchy1 protein_coding protein_coding MGP_BALBcJ_T0072598.1 MGP_BALBcJ_G0029715.1 mouse_genomes_project 5 90290434 90304652 - MGP_BALBcJ_P0072598 Rchy1 protein_coding protein_coding MGP_BALBcJ_T0072599.1 MGP_BALBcJ_G0029715.1 mouse_genomes_project 5 90293645 90295546 - Rchy1 protein_coding retained_intron MGP_BALBcJ_T0072600.1 MGP_BALBcJ_G0029715.1 mouse_genomes_project 5 90303598 90304643 - Rchy1 protein_coding retained_intron MGP_BALBcJ_T0073400.1 MGP_BALBcJ_G0029886.1 mouse_genomes_project 5 111914762 111917092 + MGP_BALBcJ_P0073400 Gm6588 protein_coding protein_coding MGP_BALBcJ_T0001797.1 MGP_BALBcJ_G0001712.1 mouse_genomes_project 5 121228406 121229495 + TEC TEC MGP_BALBcJ_T0008098.1 MGP_BALBcJ_G0006598.1 mouse_genomes_project 5 41454538 41455578 - Gm42555 lincRNA lincRNA MGP_BALBcJ_T0101232.1 MGP_BALBcJ_G0039268.1 mouse_genomes_project 5 147580484 147580614 - Gm24556 snoRNA snoRNA MGP_BALBcJ_T0073941.1 MGP_BALBcJ_G0029991.1 mouse_genomes_project 5 120465648 120479004 - MGP_BALBcJ_P0073941 Oas1c protein_coding protein_coding MGP_BALBcJ_T0073942.1 MGP_BALBcJ_G0029991.1 mouse_genomes_project 5 120468458 120478978 - MGP_BALBcJ_P0073942 Oas1c protein_coding protein_coding MGP_BALBcJ_T0073943.1 MGP_BALBcJ_G0029991.1 mouse_genomes_project 5 120470854 120479004 - Oas1c protein_coding processed_transcript MGP_BALBcJ_T0018128.1 MGP_BALBcJ_G0015543.1 mouse_genomes_project 5 72058045 72059306 + Dancr processed_transcript lincRNA MGP_BALBcJ_T0018129.1 MGP_BALBcJ_G0015543.1 mouse_genomes_project 5 72058051 72059305 + Dancr processed_transcript retained_intron MGP_BALBcJ_T0075436.1 MGP_BALBcJ_G0030259.1 mouse_genomes_project 5 138904288 138906295 + Gm5294 protein_coding unprocessed_pseudogene MGP_BALBcJ_T0075437.1 MGP_BALBcJ_G0030259.1 mouse_genomes_project 5 138904998 138906538 + MGP_BALBcJ_P0075437 Gm5294 protein_coding protein_coding MGP_BALBcJ_T0074943.1 MGP_BALBcJ_G0030157.1 mouse_genomes_project 5 135181911 135240245 - MGP_BALBcJ_P0074943 Fkbp6 protein_coding protein_coding MGP_BALBcJ_T0074944.1 MGP_BALBcJ_G0030157.1 mouse_genomes_project 5 135181911 135240215 - MGP_BALBcJ_P0074944 Fkbp6 protein_coding protein_coding MGP_BALBcJ_T0074945.1 MGP_BALBcJ_G0030157.1 mouse_genomes_project 5 135227567 135240076 - MGP_BALBcJ_P0074945 Fkbp6 protein_coding protein_coding MGP_BALBcJ_T0074946.1 MGP_BALBcJ_G0030157.1 mouse_genomes_project 5 135227567 135240244 - MGP_BALBcJ_P0074946 Fkbp6 protein_coding protein_coding MGP_BALBcJ_T0004853.1 MGP_BALBcJ_G0004176.1 mouse_genomes_project 5 140217040 140223433 + Gm16121 antisense antisense MGP_BALBcJ_T0071119.1 MGP_BALBcJ_G0029433.1 mouse_genomes_project 5 31659995 31661586 + MGP_BALBcJ_P0071119 Gm1673 protein_coding protein_coding MGP_BALBcJ_T0071120.1 MGP_BALBcJ_G0029433.1 mouse_genomes_project 5 31659999 31661582 + Gm1673 protein_coding retained_intron MGP_BALBcJ_T0071121.1 MGP_BALBcJ_G0029433.1 mouse_genomes_project 5 31660032 31661582 + MGP_BALBcJ_P0071121 Gm1673 protein_coding protein_coding MGP_BALBcJ_T0071122.1 MGP_BALBcJ_G0029433.1 mouse_genomes_project 5 31660036 31661579 + MGP_BALBcJ_P0071122 Gm1673 protein_coding protein_coding MGP_BALBcJ_T0071123.1 MGP_BALBcJ_G0029433.1 mouse_genomes_project 5 31660072 31661583 + MGP_BALBcJ_P0071123 Gm1673 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071124.1 MGP_BALBcJ_G0029433.1 mouse_genomes_project 5 31660096 31661582 + MGP_BALBcJ_P0071124 Gm1673 protein_coding protein_coding MGP_BALBcJ_T0072913.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102392653 102400923 - MGP_BALBcJ_P0072913 1700016H13Rik protein_coding protein_coding MGP_BALBcJ_T0072914.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102393043 102400645 - MGP_BALBcJ_P0072914 1700016H13Rik protein_coding protein_coding MGP_BALBcJ_T0072915.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102393201 102400636 - MGP_BALBcJ_P0072915 1700016H13Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072916.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102393207 102400661 - MGP_BALBcJ_P0072916 1700016H13Rik protein_coding protein_coding MGP_BALBcJ_T0072917.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102393312 102400636 - MGP_BALBcJ_P0072917 1700016H13Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072918.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102393385 102400636 - MGP_BALBcJ_P0072918 1700016H13Rik protein_coding protein_coding MGP_BALBcJ_T0072919.1 MGP_BALBcJ_G0029778.1 mouse_genomes_project 5 102393385 102400637 - MGP_BALBcJ_P0072919 1700016H13Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075137.1 MGP_BALBcJ_G0030192.1 mouse_genomes_project 5 136957968 136965290 + MGP_BALBcJ_P0075137 Vgf protein_coding protein_coding MGP_BALBcJ_T0075138.1 MGP_BALBcJ_G0030192.1 mouse_genomes_project 5 136962233 136965290 + MGP_BALBcJ_P0075138 Vgf protein_coding protein_coding MGP_BALBcJ_T0075139.1 MGP_BALBcJ_G0030192.1 mouse_genomes_project 5 136962302 136964967 + MGP_BALBcJ_P0075139 Vgf protein_coding protein_coding MGP_BALBcJ_T0075140.1 MGP_BALBcJ_G0030192.1 mouse_genomes_project 5 136962639 136963346 + MGP_BALBcJ_P0075140 Vgf protein_coding protein_coding MGP_BALBcJ_T0098974.1 MGP_BALBcJ_G0037021.1 mouse_genomes_project 5 122163405 122165980 + Gm42829 sense_intronic sense_intronic MGP_BALBcJ_T0075052.1 MGP_BALBcJ_G0030178.1 mouse_genomes_project 5 136040359 136046732 + MGP_BALBcJ_P0075052 Polr2j protein_coding protein_coding MGP_BALBcJ_T0075053.1 MGP_BALBcJ_G0030178.1 mouse_genomes_project 5 136040359 136046508 + MGP_BALBcJ_P0075053 Polr2j protein_coding protein_coding MGP_BALBcJ_T0075054.1 MGP_BALBcJ_G0030178.1 mouse_genomes_project 5 136040430 136046721 + MGP_BALBcJ_P0075054 Polr2j protein_coding protein_coding MGP_BALBcJ_T0073892.1 MGP_BALBcJ_G0029979.1 mouse_genomes_project 5 120143765 120164071 - MGP_BALBcJ_P0073892 Plbd2 protein_coding protein_coding MGP_BALBcJ_T0073893.1 MGP_BALBcJ_G0029979.1 mouse_genomes_project 5 120145730 120164047 - Plbd2 protein_coding retained_intron MGP_BALBcJ_T0073894.1 MGP_BALBcJ_G0029979.1 mouse_genomes_project 5 120147782 120164058 - Plbd2 protein_coding retained_intron MGP_BALBcJ_T0001638.1 MGP_BALBcJ_G0001554.1 mouse_genomes_project 5 63703814 63706266 + TEC TEC MGP_BALBcJ_T0075382.1 MGP_BALBcJ_G0030245.1 mouse_genomes_project 5 138318960 138322875 + MGP_BALBcJ_P0075382 Lamtor4 protein_coding protein_coding MGP_BALBcJ_T0075383.1 MGP_BALBcJ_G0030245.1 mouse_genomes_project 5 138319309 138322878 + Lamtor4 protein_coding processed_transcript MGP_BALBcJ_T0008164.1 MGP_BALBcJ_G0006652.1 mouse_genomes_project 5 75488404 75491768 + 1700017L05Rik lincRNA lincRNA MGP_BALBcJ_T0074001.1 MGP_BALBcJ_G0030005.1 mouse_genomes_project 5 121224038 121228329 - MGP_BALBcJ_P0074001 Adam1b protein_coding protein_coding MGP_BALBcJ_T0071980.1 MGP_BALBcJ_G0029572.1 mouse_genomes_project 5 65327859 65363269 - MGP_BALBcJ_P0071980 Bend4 protein_coding protein_coding MGP_BALBcJ_T0071981.1 MGP_BALBcJ_G0029572.1 mouse_genomes_project 5 65327860 65363087 - MGP_BALBcJ_P0071981 Bend4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071982.1 MGP_BALBcJ_G0029572.1 mouse_genomes_project 5 65327860 65363087 - MGP_BALBcJ_P0071982 Bend4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071983.1 MGP_BALBcJ_G0029572.1 mouse_genomes_project 5 65327860 65362800 - MGP_BALBcJ_P0071983 Bend4 protein_coding protein_coding MGP_BALBcJ_T0071984.1 MGP_BALBcJ_G0029572.1 mouse_genomes_project 5 65327860 65363780 - MGP_BALBcJ_P0071984 Bend4 protein_coding protein_coding MGP_BALBcJ_T0014988.1 MGP_BALBcJ_G0013085.1 mouse_genomes_project 5 64137518 64140952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008179.1 MGP_BALBcJ_G0006664.1 mouse_genomes_project 5 90100046 90106908 - Gm28271 lincRNA lincRNA MGP_BALBcJ_T0072759.1 MGP_BALBcJ_G0029746.1 mouse_genomes_project 5 96118081 96119961 - MGP_BALBcJ_P0072759 Gk2 protein_coding protein_coding MGP_BALBcJ_T0010651.1 MGP_BALBcJ_G0008776.1 mouse_genomes_project 5 27745125 27745203 + Mir1960 miRNA miRNA MGP_BALBcJ_T0001587.1 MGP_BALBcJ_G0001504.1 mouse_genomes_project 5 49510333 49514711 - TEC TEC MGP_BALBcJ_T0101203.1 MGP_BALBcJ_G0039239.1 mouse_genomes_project 5 63702552 63702746 + Gm24346 snoRNA snoRNA MGP_BALBcJ_T0075879.1 MGP_BALBcJ_G0030352.1 mouse_genomes_project 5 145569053 145619737 + MGP_BALBcJ_P0075879 Cyp3a57 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075880.1 MGP_BALBcJ_G0030352.1 mouse_genomes_project 5 145569061 145620151 + MGP_BALBcJ_P0075880 Cyp3a57 protein_coding protein_coding MGP_BALBcJ_T0004863.1 MGP_BALBcJ_G0004183.1 mouse_genomes_project 5 144420186 144424892 - 2900089D17Rik antisense antisense MGP_BALBcJ_T0004864.1 MGP_BALBcJ_G0004183.1 mouse_genomes_project 5 144420273 144434674 - 2900089D17Rik antisense antisense MGP_BALBcJ_T0015015.1 MGP_BALBcJ_G0013112.1 mouse_genomes_project 5 75331660 75331943 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070972.1 MGP_BALBcJ_G0029410.1 mouse_genomes_project 5 29736170 29758213 + MGP_BALBcJ_P0070972 Fosl2 protein_coding protein_coding MGP_BALBcJ_T0070973.1 MGP_BALBcJ_G0029410.1 mouse_genomes_project 5 29736542 29740021 + Fosl2 protein_coding retained_intron MGP_BALBcJ_T0070974.1 MGP_BALBcJ_G0029410.1 mouse_genomes_project 5 29746893 29754084 + Fosl2 protein_coding retained_intron MGP_BALBcJ_T0001654.1 MGP_BALBcJ_G0001570.1 mouse_genomes_project 5 64535946 64539001 - TEC TEC MGP_BALBcJ_T0008264.1 MGP_BALBcJ_G0006723.1 mouse_genomes_project 5 111196089 111226350 - E130006D01Rik lincRNA lincRNA MGP_BALBcJ_T0008265.1 MGP_BALBcJ_G0006723.1 mouse_genomes_project 5 111196108 111226372 - E130006D01Rik lincRNA lincRNA MGP_BALBcJ_T0008266.1 MGP_BALBcJ_G0006723.1 mouse_genomes_project 5 111196215 111226347 - E130006D01Rik lincRNA lincRNA MGP_BALBcJ_T0074914.1 MGP_BALBcJ_G0030150.1 mouse_genomes_project 5 134946349 134948010 + MGP_BALBcJ_P0074914 Dnajc30 protein_coding protein_coding MGP_BALBcJ_T0072001.1 MGP_BALBcJ_G0029575.1 mouse_genomes_project 5 65847847 65866927 - MGP_BALBcJ_P0072001 Gm21905 protein_coding protein_coding MGP_BALBcJ_T0015014.1 MGP_BALBcJ_G0013111.1 mouse_genomes_project 5 75237014 75237587 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008230.1 MGP_BALBcJ_G0006701.1 mouse_genomes_project 5 105273416 105275298 + Gm32921 lincRNA lincRNA MGP_BALBcJ_T0074125.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115807 122124501 + MGP_BALBcJ_P0074125 Vps29 protein_coding protein_coding MGP_BALBcJ_T0074126.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115828 122123707 + MGP_BALBcJ_P0074126 Vps29 protein_coding protein_coding MGP_BALBcJ_T0074127.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115831 122123452 + Vps29 protein_coding processed_transcript MGP_BALBcJ_T0074128.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115844 122124426 + MGP_BALBcJ_P0074128 Vps29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074129.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115862 122123401 + MGP_BALBcJ_P0074129 Vps29 protein_coding protein_coding MGP_BALBcJ_T0074130.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115882 122123483 + MGP_BALBcJ_P0074130 Vps29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074131.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122115896 122126014 + MGP_BALBcJ_P0074131 Vps29 protein_coding protein_coding MGP_BALBcJ_T0074132.1 MGP_BALBcJ_G0030024.1 mouse_genomes_project 5 122118841 122122205 + Vps29 protein_coding retained_intron MGP_BALBcJ_T0001726.1 MGP_BALBcJ_G0001641.1 mouse_genomes_project 5 99150988 99152821 + TEC TEC MGP_BALBcJ_T0001637.1 MGP_BALBcJ_G0001553.1 mouse_genomes_project 5 63597440 63599687 - TEC TEC MGP_BALBcJ_T0015061.1 MGP_BALBcJ_G0013158.1 mouse_genomes_project 5 99239034 99239468 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001682.1 MGP_BALBcJ_G0001597.1 mouse_genomes_project 5 70993310 70996679 - TEC TEC MGP_BALBcJ_T0070635.1 MGP_BALBcJ_G0029359.1 mouse_genomes_project 5 27677980 27680473 - MGP_BALBcJ_P0070635 3110082J24Rik protein_coding protein_coding MGP_BALBcJ_T0070636.1 MGP_BALBcJ_G0029359.1 mouse_genomes_project 5 27678285 27679746 - MGP_BALBcJ_P0070636 3110082J24Rik protein_coding protein_coding MGP_BALBcJ_T0001499.1 MGP_BALBcJ_G0001417.1 mouse_genomes_project 5 30467420 30468458 - TEC TEC MGP_BALBcJ_T0098952.1 MGP_BALBcJ_G0036999.1 mouse_genomes_project 5 1000264 1002153 + Gm43031 sense_intronic sense_intronic MGP_BALBcJ_T0075182.1 MGP_BALBcJ_G0030201.1 mouse_genomes_project 5 137231980 137236721 - MGP_BALBcJ_P0075182 Trip6 protein_coding protein_coding MGP_BALBcJ_T0075183.1 MGP_BALBcJ_G0030201.1 mouse_genomes_project 5 137235269 137236508 - MGP_BALBcJ_P0075183 Trip6 protein_coding protein_coding MGP_BALBcJ_T0075184.1 MGP_BALBcJ_G0030201.1 mouse_genomes_project 5 137235296 137236479 - Trip6 protein_coding retained_intron MGP_BALBcJ_T0075185.1 MGP_BALBcJ_G0030201.1 mouse_genomes_project 5 137235675 137236525 - Trip6 protein_coding processed_transcript MGP_BALBcJ_T0075379.1 MGP_BALBcJ_G0030244.1 mouse_genomes_project 5 138287946 138314078 + MGP_BALBcJ_P0075379 Nxpe5 protein_coding protein_coding MGP_BALBcJ_T0075380.1 MGP_BALBcJ_G0030244.1 mouse_genomes_project 5 138287946 138314079 + MGP_BALBcJ_P0075380 Nxpe5 protein_coding protein_coding MGP_BALBcJ_T0075381.1 MGP_BALBcJ_G0030244.1 mouse_genomes_project 5 138292206 138314722 + MGP_BALBcJ_P0075381 Nxpe5 protein_coding protein_coding MGP_BALBcJ_T0014838.1 MGP_BALBcJ_G0012935.1 mouse_genomes_project 5 7757182 7757651 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008242.1 MGP_BALBcJ_G0006712.1 mouse_genomes_project 5 107367485 107368423 - Gm42518 lincRNA lincRNA MGP_BALBcJ_T0001843.1 MGP_BALBcJ_G0001757.1 mouse_genomes_project 5 130782823 130783856 - TEC TEC MGP_BALBcJ_T0001707.1 MGP_BALBcJ_G0001622.1 mouse_genomes_project 5 87889743 87891878 + TEC TEC MGP_BALBcJ_T0075023.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912907 135951537 + MGP_BALBcJ_P0075023 Dtx2 protein_coding protein_coding MGP_BALBcJ_T0075024.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912918 135951529 + MGP_BALBcJ_P0075024 Dtx2 protein_coding protein_coding MGP_BALBcJ_T0075025.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912951 135951536 + MGP_BALBcJ_P0075025 Dtx2 protein_coding protein_coding MGP_BALBcJ_T0075026.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912954 135931232 + MGP_BALBcJ_P0075026 Dtx2 protein_coding protein_coding MGP_BALBcJ_T0075027.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912965 135951531 + MGP_BALBcJ_P0075027 Dtx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075028.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912984 135951529 + MGP_BALBcJ_P0075028 Dtx2 protein_coding protein_coding MGP_BALBcJ_T0075029.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135912989 135929146 + MGP_BALBcJ_P0075029 Dtx2 protein_coding protein_coding MGP_BALBcJ_T0075030.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135913213 135914514 + Dtx2 protein_coding processed_transcript MGP_BALBcJ_T0075031.1 MGP_BALBcJ_G0030174.1 mouse_genomes_project 5 135938437 135951529 + Dtx2 protein_coding retained_intron MGP_BALBcJ_T0071410.1 MGP_BALBcJ_G0029478.1 mouse_genomes_project 5 35019839 35107522 + MGP_BALBcJ_P0071410 Evc2 protein_coding protein_coding MGP_BALBcJ_T0071411.1 MGP_BALBcJ_G0029478.1 mouse_genomes_project 5 35019948 35070230 + Evc2 protein_coding retained_intron MGP_BALBcJ_T0071412.1 MGP_BALBcJ_G0029478.1 mouse_genomes_project 5 35072390 35074502 + Evc2 protein_coding processed_transcript MGP_BALBcJ_T0071413.1 MGP_BALBcJ_G0029478.1 mouse_genomes_project 5 35098345 35100401 + Evc2 protein_coding retained_intron MGP_BALBcJ_T0099975.1 MGP_BALBcJ_G0038011.1 mouse_genomes_project 5 135786908 135787015 + Gm22450 snRNA snRNA MGP_BALBcJ_T0073301.1 MGP_BALBcJ_G0029867.1 mouse_genomes_project 5 110112369 110119415 + MGP_BALBcJ_P0073301 Ddx51 protein_coding protein_coding MGP_BALBcJ_T0073302.1 MGP_BALBcJ_G0029867.1 mouse_genomes_project 5 110112464 110114064 + Ddx51 protein_coding retained_intron MGP_BALBcJ_T0073303.1 MGP_BALBcJ_G0029867.1 mouse_genomes_project 5 110114055 110114824 + Ddx51 protein_coding retained_intron MGP_BALBcJ_T0073304.1 MGP_BALBcJ_G0029867.1 mouse_genomes_project 5 110115553 110116029 + Ddx51 protein_coding retained_intron MGP_BALBcJ_T0073305.1 MGP_BALBcJ_G0029867.1 mouse_genomes_project 5 110115780 110116790 + MGP_BALBcJ_P0073305 Ddx51 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073357.1 MGP_BALBcJ_G0029876.1 mouse_genomes_project 5 111195729 111196380 + MGP_BALBcJ_P0073357 Gm26897 protein_coding protein_coding MGP_BALBcJ_T0098609.1 MGP_BALBcJ_G0036663.1 mouse_genomes_project 5 50819544 50819623 + n-R5s171 rRNA rRNA MGP_BALBcJ_T0008166.1 MGP_BALBcJ_G0006654.1 mouse_genomes_project 5 80236889 80239192 - 1700031L13Rik lincRNA lincRNA MGP_BALBcJ_T0008167.1 MGP_BALBcJ_G0006654.1 mouse_genomes_project 5 80236908 80239195 - 1700031L13Rik lincRNA lincRNA MGP_BALBcJ_T0008168.1 MGP_BALBcJ_G0006654.1 mouse_genomes_project 5 80236918 80237827 - 1700031L13Rik lincRNA lincRNA MGP_BALBcJ_T0008169.1 MGP_BALBcJ_G0006654.1 mouse_genomes_project 5 80237167 80237819 - 1700031L13Rik lincRNA lincRNA MGP_BALBcJ_T0074306.1 MGP_BALBcJ_G0030051.1 mouse_genomes_project 5 123325705 123359293 - MGP_BALBcJ_P0074306 Vps33a protein_coding protein_coding MGP_BALBcJ_T0074307.1 MGP_BALBcJ_G0030051.1 mouse_genomes_project 5 123339642 123344586 - Vps33a protein_coding retained_intron MGP_BALBcJ_T0074308.1 MGP_BALBcJ_G0030051.1 mouse_genomes_project 5 123349531 123355086 - Vps33a protein_coding retained_intron MGP_BALBcJ_T0074309.1 MGP_BALBcJ_G0030051.1 mouse_genomes_project 5 123351233 123359234 - MGP_BALBcJ_P0074309 Vps33a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073987.1 MGP_BALBcJ_G0030003.1 mouse_genomes_project 5 121153992 121177858 - MGP_BALBcJ_P0073987 Erp29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073990.1 MGP_BALBcJ_G0030003.1 mouse_genomes_project 5 121166186 121177877 - MGP_BALBcJ_P0073990 Erp29 protein_coding protein_coding MGP_BALBcJ_T0073991.1 MGP_BALBcJ_G0030003.1 mouse_genomes_project 5 121170122 121177867 - MGP_BALBcJ_P0073991 Erp29 protein_coding protein_coding MGP_BALBcJ_T0073992.1 MGP_BALBcJ_G0030003.1 mouse_genomes_project 5 121170607 121177719 - MGP_BALBcJ_P0073992 Erp29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102594.1 MGP_BALBcJ_G0040410.1 mouse_genomes_project 5 152154271 152154359 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0071417.1 MGP_BALBcJ_G0029481.1 mouse_genomes_project 5 35494613 35498687 - MGP_BALBcJ_P0071417 Msx1 protein_coding protein_coding MGP_BALBcJ_T0071418.1 MGP_BALBcJ_G0029481.1 mouse_genomes_project 5 35496827 35498686 - Msx1 protein_coding retained_intron MGP_BALBcJ_T0001684.1 MGP_BALBcJ_G0001599.1 mouse_genomes_project 5 71240876 71241754 + TEC TEC MGP_BALBcJ_T0075346.1 MGP_BALBcJ_G0030238.1 mouse_genomes_project 5 138135052 138138628 + MGP_BALBcJ_P0075346 Cops6 protein_coding protein_coding MGP_BALBcJ_T0075347.1 MGP_BALBcJ_G0030238.1 mouse_genomes_project 5 138135081 138137960 + MGP_BALBcJ_P0075347 Cops6 protein_coding protein_coding MGP_BALBcJ_T0075348.1 MGP_BALBcJ_G0030238.1 mouse_genomes_project 5 138135090 138136366 + Cops6 protein_coding retained_intron MGP_BALBcJ_T0075349.1 MGP_BALBcJ_G0030238.1 mouse_genomes_project 5 138135150 138138121 + Cops6 protein_coding retained_intron MGP_BALBcJ_T0075350.1 MGP_BALBcJ_G0030238.1 mouse_genomes_project 5 138136758 138137901 + MGP_BALBcJ_P0075350 Cops6 protein_coding protein_coding MGP_BALBcJ_T0075077.1 MGP_BALBcJ_G0030183.1 mouse_genomes_project 5 136135987 136167022 - MGP_BALBcJ_P0075077 Sh2b2 protein_coding protein_coding MGP_BALBcJ_T0075078.1 MGP_BALBcJ_G0030183.1 mouse_genomes_project 5 136135989 136167071 - MGP_BALBcJ_P0075078 Sh2b2 protein_coding protein_coding MGP_BALBcJ_T0075079.1 MGP_BALBcJ_G0030183.1 mouse_genomes_project 5 136138207 136140503 - Sh2b2 protein_coding retained_intron MGP_BALBcJ_T0075080.1 MGP_BALBcJ_G0030183.1 mouse_genomes_project 5 136141609 136167005 - MGP_BALBcJ_P0075080 Sh2b2 protein_coding protein_coding MGP_BALBcJ_T0075081.1 MGP_BALBcJ_G0030183.1 mouse_genomes_project 5 136152924 136168710 - MGP_BALBcJ_P0075081 Sh2b2 protein_coding protein_coding MGP_BALBcJ_T0070690.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28210948 28218917 + MGP_BALBcJ_P0070690 Cenpa protein_coding protein_coding MGP_BALBcJ_T0070691.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211068 28218465 + MGP_BALBcJ_P0070691 Cenpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070692.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211083 28218402 + MGP_BALBcJ_P0070692 Cenpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070693.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211106 28218496 + Cenpa protein_coding retained_intron MGP_BALBcJ_T0070694.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211114 28213931 + MGP_BALBcJ_P0070694 Cenpa protein_coding protein_coding MGP_BALBcJ_T0070695.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211128 28218151 + MGP_BALBcJ_P0070695 Cenpa protein_coding protein_coding MGP_BALBcJ_T0070696.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211131 28214852 + Cenpa protein_coding retained_intron MGP_BALBcJ_T0070697.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211145 28218496 + MGP_BALBcJ_P0070697 Cenpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070698.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28211169 28218473 + MGP_BALBcJ_P0070698 Cenpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070699.1 MGP_BALBcJ_G0029371.1 mouse_genomes_project 5 28216041 28218289 + Cenpa protein_coding retained_intron MGP_BALBcJ_T0001875.1 MGP_BALBcJ_G0001788.1 mouse_genomes_project 5 134807621 134809243 - TEC TEC MGP_BALBcJ_T0014935.1 MGP_BALBcJ_G0013032.1 mouse_genomes_project 5 40162717 40163151 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074677.1 MGP_BALBcJ_G0030115.1 mouse_genomes_project 5 129790873 129805647 - MGP_BALBcJ_P0074677 Gusb protein_coding protein_coding MGP_BALBcJ_T0074678.1 MGP_BALBcJ_G0030115.1 mouse_genomes_project 5 129790888 129805426 - MGP_BALBcJ_P0074678 Gusb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074679.1 MGP_BALBcJ_G0030115.1 mouse_genomes_project 5 129791446 129792508 - Gusb protein_coding retained_intron MGP_BALBcJ_T0074680.1 MGP_BALBcJ_G0030115.1 mouse_genomes_project 5 129800788 129805463 - MGP_BALBcJ_P0074680 Gusb protein_coding protein_coding MGP_BALBcJ_T0074681.1 MGP_BALBcJ_G0030115.1 mouse_genomes_project 5 129801731 129805479 - MGP_BALBcJ_P0074681 Gusb protein_coding protein_coding MGP_BALBcJ_T0074682.1 MGP_BALBcJ_G0030115.1 mouse_genomes_project 5 129801754 129805563 - Gusb protein_coding retained_intron MGP_BALBcJ_T0098959.1 MGP_BALBcJ_G0037006.1 mouse_genomes_project 5 21133750 21134558 - Gm43566 sense_intronic sense_intronic MGP_BALBcJ_T0072411.1 MGP_BALBcJ_G0029654.1 mouse_genomes_project 5 85191319 85204206 + MGP_BALBcJ_P0072411 Ugt2b35 protein_coding protein_coding MGP_BALBcJ_T0070638.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27692734 27729588 - MGP_BALBcJ_P0070638 Hadha protein_coding protein_coding MGP_BALBcJ_T0070639.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27693856 27729402 - Hadha protein_coding processed_transcript MGP_BALBcJ_T0070640.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27694329 27694736 - Hadha protein_coding processed_transcript MGP_BALBcJ_T0070641.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27695899 27701550 - Hadha protein_coding retained_intron MGP_BALBcJ_T0070642.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27701166 27709473 - MGP_BALBcJ_P0070642 Hadha protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070643.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27703145 27715458 - Hadha protein_coding retained_intron MGP_BALBcJ_T0070644.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27707665 27729388 - Hadha protein_coding retained_intron MGP_BALBcJ_T0070645.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27721514 27723974 - Hadha protein_coding retained_intron MGP_BALBcJ_T0070646.1 MGP_BALBcJ_G0029361.1 mouse_genomes_project 5 27728347 27729416 - Hadha protein_coding retained_intron MGP_BALBcJ_T0070776.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28597471 28622096 + MGP_BALBcJ_P0070776 Cad protein_coding protein_coding MGP_BALBcJ_T0070777.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28597502 28611377 + MGP_BALBcJ_P0070777 Cad protein_coding protein_coding MGP_BALBcJ_T0070778.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28597619 28621849 + MGP_BALBcJ_P0070778 Cad protein_coding protein_coding MGP_BALBcJ_T0070779.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28597619 28621849 + MGP_BALBcJ_P0070779 Cad protein_coding protein_coding MGP_BALBcJ_T0070780.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28597646 28621812 + MGP_BALBcJ_P0070780 Cad protein_coding protein_coding MGP_BALBcJ_T0070781.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28601593 28602884 + Cad protein_coding retained_intron MGP_BALBcJ_T0070782.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28604713 28610582 + Cad protein_coding retained_intron MGP_BALBcJ_T0070783.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28609908 28610794 + Cad protein_coding processed_transcript MGP_BALBcJ_T0070784.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28613969 28615808 + Cad protein_coding processed_transcript MGP_BALBcJ_T0070785.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28614082 28616319 + Cad protein_coding retained_intron MGP_BALBcJ_T0070786.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28614168 28616596 + Cad protein_coding retained_intron MGP_BALBcJ_T0070787.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28615922 28617195 + Cad protein_coding retained_intron MGP_BALBcJ_T0070788.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28617731 28619643 + MGP_BALBcJ_P0070788 Cad protein_coding protein_coding MGP_BALBcJ_T0070789.1 MGP_BALBcJ_G0029384.1 mouse_genomes_project 5 28619427 28620280 + Cad protein_coding retained_intron MGP_BALBcJ_T0075718.1 MGP_BALBcJ_G0030319.1 mouse_genomes_project 5 143696244 143721232 - MGP_BALBcJ_P0075718 Rac1 protein_coding protein_coding MGP_BALBcJ_T0075719.1 MGP_BALBcJ_G0030319.1 mouse_genomes_project 5 143698092 143721189 - MGP_BALBcJ_P0075719 Rac1 protein_coding protein_coding MGP_BALBcJ_T0075720.1 MGP_BALBcJ_G0030319.1 mouse_genomes_project 5 143699508 143711379 - Rac1 protein_coding processed_transcript MGP_BALBcJ_T0075721.1 MGP_BALBcJ_G0030319.1 mouse_genomes_project 5 143707649 143710805 - Rac1 protein_coding processed_transcript MGP_BALBcJ_T0072066.1 MGP_BALBcJ_G0029590.1 mouse_genomes_project 5 70531725 70572692 - MGP_BALBcJ_P0072066 Cnga1 protein_coding protein_coding MGP_BALBcJ_T0072067.1 MGP_BALBcJ_G0029590.1 mouse_genomes_project 5 70531725 70548800 - MGP_BALBcJ_P0072067 Cnga1 protein_coding protein_coding MGP_BALBcJ_T0072068.1 MGP_BALBcJ_G0029590.1 mouse_genomes_project 5 70532144 70567786 - MGP_BALBcJ_P0072068 Cnga1 protein_coding protein_coding MGP_BALBcJ_T0072069.1 MGP_BALBcJ_G0029590.1 mouse_genomes_project 5 70544779 70567791 - MGP_BALBcJ_P0072069 Cnga1 protein_coding protein_coding MGP_BALBcJ_T0072070.1 MGP_BALBcJ_G0029590.1 mouse_genomes_project 5 70548674 70560616 - MGP_BALBcJ_P0072070 Cnga1 protein_coding protein_coding MGP_BALBcJ_T0072071.1 MGP_BALBcJ_G0029590.1 mouse_genomes_project 5 70572226 70574221 - Cnga1 protein_coding retained_intron MGP_BALBcJ_T0099945.1 MGP_BALBcJ_G0037981.1 mouse_genomes_project 5 85107970 85108076 - Gm24121 snRNA snRNA MGP_BALBcJ_T0004617.1 MGP_BALBcJ_G0004000.1 mouse_genomes_project 5 11402458 11420145 - Gm4128 antisense antisense MGP_BALBcJ_T0075607.1 MGP_BALBcJ_G0030295.1 mouse_genomes_project 5 141383754 141727875 + Sdk1 protein_coding retained_intron MGP_BALBcJ_T0075608.1 MGP_BALBcJ_G0030295.1 mouse_genomes_project 5 141514572 142106563 + Sdk1 protein_coding retained_intron MGP_BALBcJ_T0075609.1 MGP_BALBcJ_G0030295.1 mouse_genomes_project 5 141712528 142349112 + MGP_BALBcJ_P0075609 Sdk1 protein_coding unknown_likely_coding MGP_BALBcJ_T0008068.1 MGP_BALBcJ_G0006580.1 mouse_genomes_project 5 33064186 33070079 + 4930478P22Rik lincRNA lincRNA MGP_BALBcJ_T0008069.1 MGP_BALBcJ_G0006580.1 mouse_genomes_project 5 33064198 33070315 + 4930478P22Rik lincRNA lincRNA MGP_BALBcJ_T0008070.1 MGP_BALBcJ_G0006580.1 mouse_genomes_project 5 33064204 33069541 + 4930478P22Rik lincRNA lincRNA MGP_BALBcJ_T0074899.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935104 134939075 - MGP_BALBcJ_P0074899 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0074900.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935104 134946814 - MGP_BALBcJ_P0074900 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0074901.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935106 134946226 - MGP_BALBcJ_P0074901 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0074902.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935106 134947107 - MGP_BALBcJ_P0074902 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0074903.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935432 134946187 - MGP_BALBcJ_P0074903 Wbscr22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074904.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935434 134938875 - Wbscr22 protein_coding retained_intron MGP_BALBcJ_T0074905.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935480 134939167 - Wbscr22 protein_coding retained_intron MGP_BALBcJ_T0074906.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134935760 134939061 - Wbscr22 protein_coding retained_intron MGP_BALBcJ_T0074907.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134938196 134943617 - Wbscr22 protein_coding processed_transcript MGP_BALBcJ_T0074908.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134938627 134946196 - Wbscr22 protein_coding retained_intron MGP_BALBcJ_T0074909.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134939033 134943489 - Wbscr22 protein_coding retained_intron MGP_BALBcJ_T0074910.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134941342 134945912 - MGP_BALBcJ_P0074910 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0074911.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134943408 134946238 - MGP_BALBcJ_P0074911 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0074912.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134945884 134946227 - Wbscr22 protein_coding processed_transcript MGP_BALBcJ_T0074913.1 MGP_BALBcJ_G0030149.1 mouse_genomes_project 5 134946304 134946797 - MGP_BALBcJ_P0074913 Wbscr22 protein_coding protein_coding MGP_BALBcJ_T0004809.1 MGP_BALBcJ_G0004144.1 mouse_genomes_project 5 123997776 123998697 + Pitpnm2os2 antisense antisense MGP_BALBcJ_T0004810.1 MGP_BALBcJ_G0004144.1 mouse_genomes_project 5 123997829 124003217 + Pitpnm2os2 antisense antisense MGP_BALBcJ_T0004811.1 MGP_BALBcJ_G0004144.1 mouse_genomes_project 5 123998511 124000978 + Pitpnm2os2 antisense antisense MGP_BALBcJ_T0075126.1 MGP_BALBcJ_G0030190.1 mouse_genomes_project 5 136914189 136920032 - MGP_BALBcJ_P0075126 Znhit1 protein_coding protein_coding MGP_BALBcJ_T0075127.1 MGP_BALBcJ_G0030190.1 mouse_genomes_project 5 136914214 136918836 - MGP_BALBcJ_P0075127 Znhit1 protein_coding protein_coding MGP_BALBcJ_T0075128.1 MGP_BALBcJ_G0030190.1 mouse_genomes_project 5 136914219 136918833 - MGP_BALBcJ_P0075128 Znhit1 protein_coding protein_coding MGP_BALBcJ_T0075129.1 MGP_BALBcJ_G0030190.1 mouse_genomes_project 5 136914346 136919236 - MGP_BALBcJ_P0075129 Znhit1 protein_coding protein_coding MGP_BALBcJ_T0075130.1 MGP_BALBcJ_G0030190.1 mouse_genomes_project 5 136914922 136919512 - MGP_BALBcJ_P0075130 Znhit1 protein_coding protein_coding MGP_BALBcJ_T0015049.1 MGP_BALBcJ_G0013146.1 mouse_genomes_project 5 90716855 90718497 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075989.1 MGP_BALBcJ_G0030377.1 mouse_genomes_project 5 148741362 148814656 - MGP_BALBcJ_P0075989 Slc7a1 protein_coding protein_coding MGP_BALBcJ_T0075990.1 MGP_BALBcJ_G0030377.1 mouse_genomes_project 5 148748459 148807580 - MGP_BALBcJ_P0075990 Slc7a1 protein_coding protein_coding MGP_BALBcJ_T0075991.1 MGP_BALBcJ_G0030377.1 mouse_genomes_project 5 148754569 148756720 - Slc7a1 protein_coding retained_intron MGP_BALBcJ_T0075992.1 MGP_BALBcJ_G0030377.1 mouse_genomes_project 5 148756071 148814543 - MGP_BALBcJ_P0075992 Slc7a1 protein_coding protein_coding MGP_BALBcJ_T0075993.1 MGP_BALBcJ_G0030377.1 mouse_genomes_project 5 148766262 148785639 - MGP_BALBcJ_P0075993 Slc7a1 protein_coding protein_coding MGP_BALBcJ_T0075994.1 MGP_BALBcJ_G0030377.1 mouse_genomes_project 5 148806181 148808414 - Slc7a1 protein_coding retained_intron MGP_BALBcJ_T0102563.1 MGP_BALBcJ_G0040379.1 mouse_genomes_project 5 56160914 56162183 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101205.1 MGP_BALBcJ_G0039241.1 mouse_genomes_project 5 72058498 72058619 + Snora26 snoRNA snoRNA MGP_BALBcJ_T0001691.1 MGP_BALBcJ_G0001606.1 mouse_genomes_project 5 72142397 72146298 - TEC TEC MGP_BALBcJ_T0074862.1 MGP_BALBcJ_G0030140.1 mouse_genomes_project 5 134531956 134564520 - MGP_BALBcJ_P0074862 Limk1 protein_coding protein_coding MGP_BALBcJ_T0074863.1 MGP_BALBcJ_G0030140.1 mouse_genomes_project 5 134531957 134554153 - MGP_BALBcJ_P0074863 Limk1 protein_coding protein_coding MGP_BALBcJ_T0074864.1 MGP_BALBcJ_G0030140.1 mouse_genomes_project 5 134532116 134554125 - MGP_BALBcJ_P0074864 Limk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074865.1 MGP_BALBcJ_G0030140.1 mouse_genomes_project 5 134535905 134540110 - MGP_BALBcJ_P0074865 Limk1 protein_coding protein_coding MGP_BALBcJ_T0074866.1 MGP_BALBcJ_G0030140.1 mouse_genomes_project 5 134539848 134544324 - Limk1 protein_coding retained_intron MGP_BALBcJ_T0074867.1 MGP_BALBcJ_G0030140.1 mouse_genomes_project 5 134544077 134564496 - Limk1 protein_coding retained_intron MGP_BALBcJ_T0075002.1 MGP_BALBcJ_G0030169.1 mouse_genomes_project 5 135714462 135752774 + Srrm3 protein_coding retained_intron MGP_BALBcJ_T0075003.1 MGP_BALBcJ_G0030169.1 mouse_genomes_project 5 135714469 135763472 + MGP_BALBcJ_P0075003 Srrm3 protein_coding protein_coding MGP_BALBcJ_T0075004.1 MGP_BALBcJ_G0030169.1 mouse_genomes_project 5 135725366 135784361 + MGP_BALBcJ_P0075004 Srrm3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075005.1 MGP_BALBcJ_G0030169.1 mouse_genomes_project 5 135725366 135786024 + MGP_BALBcJ_P0075005 Srrm3 protein_coding protein_coding MGP_BALBcJ_T0075006.1 MGP_BALBcJ_G0030169.1 mouse_genomes_project 5 135765670 135768782 + Srrm3 protein_coding retained_intron MGP_BALBcJ_T0075007.1 MGP_BALBcJ_G0030169.1 mouse_genomes_project 5 135777878 135779470 + Srrm3 protein_coding retained_intron MGP_BALBcJ_T0001656.1 MGP_BALBcJ_G0001572.1 mouse_genomes_project 5 64664509 64666078 + TEC TEC MGP_BALBcJ_T0073696.1 MGP_BALBcJ_G0029945.1 mouse_genomes_project 5 115030947 115040523 + MGP_BALBcJ_P0073696 Pla2g1b protein_coding protein_coding MGP_BALBcJ_T0073697.1 MGP_BALBcJ_G0029945.1 mouse_genomes_project 5 115030951 115040511 + Pla2g1b protein_coding processed_transcript MGP_BALBcJ_T0073698.1 MGP_BALBcJ_G0029945.1 mouse_genomes_project 5 115030951 115040537 + MGP_BALBcJ_P0073698 Pla2g1b protein_coding protein_coding MGP_BALBcJ_T0073699.1 MGP_BALBcJ_G0029945.1 mouse_genomes_project 5 115030957 115040376 + MGP_BALBcJ_P0073699 Pla2g1b protein_coding protein_coding MGP_BALBcJ_T0073700.1 MGP_BALBcJ_G0029945.1 mouse_genomes_project 5 115030957 115037501 + MGP_BALBcJ_P0073700 Pla2g1b protein_coding protein_coding MGP_BALBcJ_T0075858.1 MGP_BALBcJ_G0030347.1 mouse_genomes_project 5 145399010 145407363 - MGP_BALBcJ_P0075858 Atp5j2 protein_coding protein_coding MGP_BALBcJ_T0075859.1 MGP_BALBcJ_G0030347.1 mouse_genomes_project 5 145399018 145406893 - MGP_BALBcJ_P0075859 Atp5j2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075860.1 MGP_BALBcJ_G0030347.1 mouse_genomes_project 5 145399021 145406893 - MGP_BALBcJ_P0075860 Atp5j2 protein_coding protein_coding MGP_BALBcJ_T0075861.1 MGP_BALBcJ_G0030347.1 mouse_genomes_project 5 145399698 145406812 - MGP_BALBcJ_P0075861 Atp5j2 protein_coding protein_coding MGP_BALBcJ_T0075862.1 MGP_BALBcJ_G0030347.1 mouse_genomes_project 5 145404727 145406829 - Atp5j2 protein_coding retained_intron MGP_BALBcJ_T0071374.1 MGP_BALBcJ_G0029474.1 mouse_genomes_project 5 34646614 34670306 - MGP_BALBcJ_P0071374 Wfs1 protein_coding protein_coding MGP_BALBcJ_T0071375.1 MGP_BALBcJ_G0029474.1 mouse_genomes_project 5 34646617 34670034 - MGP_BALBcJ_P0071375 Wfs1 protein_coding protein_coding MGP_BALBcJ_T0071376.1 MGP_BALBcJ_G0029474.1 mouse_genomes_project 5 34649310 34658092 - MGP_BALBcJ_P0071376 Wfs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071368.1 MGP_BALBcJ_G0029472.1 mouse_genomes_project 5 34486452 34510591 - MGP_BALBcJ_P0071368 Man2b2 protein_coding protein_coding MGP_BALBcJ_T0071369.1 MGP_BALBcJ_G0029472.1 mouse_genomes_project 5 34488372 34492901 - MGP_BALBcJ_P0071369 Man2b2 protein_coding protein_coding MGP_BALBcJ_T0071370.1 MGP_BALBcJ_G0029472.1 mouse_genomes_project 5 34488378 34497622 - MGP_BALBcJ_P0071370 Man2b2 protein_coding protein_coding MGP_BALBcJ_T0008302.1 MGP_BALBcJ_G0006745.1 mouse_genomes_project 5 115897834 115901513 - Gm13838 lincRNA lincRNA MGP_BALBcJ_T0076121.1 MGP_BALBcJ_G0030396.1 mouse_genomes_project 5 151455816 151499819 + MGP_BALBcJ_P0076121 Kl protein_coding protein_coding MGP_BALBcJ_T0076122.1 MGP_BALBcJ_G0030396.1 mouse_genomes_project 5 151455913 151493018 + Kl protein_coding retained_intron MGP_BALBcJ_T0072981.1 MGP_BALBcJ_G0029801.1 mouse_genomes_project 5 104367612 104435417 + MGP_BALBcJ_P0072981 Lrrc8b protein_coding protein_coding MGP_BALBcJ_T0004680.1 MGP_BALBcJ_G0004049.1 mouse_genomes_project 5 50723184 50724686 - Gm17182 antisense antisense MGP_BALBcJ_T0001525.1 MGP_BALBcJ_G0001443.1 mouse_genomes_project 5 41429886 41431958 - TEC TEC MGP_BALBcJ_T0070105.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5093743 5380413 - MGP_BALBcJ_P0070105 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070106.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5093743 5380413 - MGP_BALBcJ_P0070106 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070107.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5093743 5380512 - MGP_BALBcJ_P0070107 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070108.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5093743 5380413 - MGP_BALBcJ_P0070108 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070109.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5093743 5380512 - MGP_BALBcJ_P0070109 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070110.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5099230 5138389 - MGP_BALBcJ_P0070110 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070111.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5100076 5133899 - MGP_BALBcJ_P0070111 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070112.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5100076 5133899 - MGP_BALBcJ_P0070112 Adam22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070113.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070113 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070114.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070114 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070115.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070115 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070116.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070116 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070117.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070117 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070118.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070118 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070119.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070119 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070120.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070120 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070121.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070121 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070122.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5103433 5133899 - MGP_BALBcJ_P0070122 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070123.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5109305 5111608 - Adam22 protein_coding retained_intron MGP_BALBcJ_T0070124.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5113627 5380508 - MGP_BALBcJ_P0070124 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070125.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5113690 5133899 - MGP_BALBcJ_P0070125 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070126.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5165740 5380512 - MGP_BALBcJ_P0070126 Adam22 protein_coding protein_coding MGP_BALBcJ_T0070127.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5239548 5380565 - Adam22 protein_coding processed_transcript MGP_BALBcJ_T0070128.1 MGP_BALBcJ_G0029262.1 mouse_genomes_project 5 5379377 5380591 - Adam22 protein_coding retained_intron MGP_BALBcJ_T0015165.1 MGP_BALBcJ_G0013262.1 mouse_genomes_project 5 143628963 143630057 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099952.1 MGP_BALBcJ_G0037988.1 mouse_genomes_project 5 99243131 99243291 - Gm23173 snRNA snRNA MGP_BALBcJ_T0001658.1 MGP_BALBcJ_G0001574.1 mouse_genomes_project 5 64919673 64921830 + TEC TEC MGP_BALBcJ_T0070700.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28254807 28339056 + MGP_BALBcJ_P0070700 Dpysl5 protein_coding protein_coding MGP_BALBcJ_T0070701.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28254825 28342103 + MGP_BALBcJ_P0070701 Dpysl5 protein_coding protein_coding MGP_BALBcJ_T0070702.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28254832 28291440 + MGP_BALBcJ_P0070702 Dpysl5 protein_coding protein_coding MGP_BALBcJ_T0070703.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28320791 28329584 + Dpysl5 protein_coding processed_transcript MGP_BALBcJ_T0070704.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28330839 28339042 + Dpysl5 protein_coding retained_intron MGP_BALBcJ_T0070705.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28334732 28339148 + Dpysl5 protein_coding retained_intron MGP_BALBcJ_T0070706.1 MGP_BALBcJ_G0029372.1 mouse_genomes_project 5 28336453 28339295 + Dpysl5 protein_coding retained_intron MGP_BALBcJ_T0098958.1 MGP_BALBcJ_G0037005.1 mouse_genomes_project 5 2321533 2324179 - Gm43728 sense_intronic sense_intronic MGP_BALBcJ_T0101212.1 MGP_BALBcJ_G0039248.1 mouse_genomes_project 5 88188261 88188390 + Gm25758 snoRNA snoRNA MGP_BALBcJ_T0001629.1 MGP_BALBcJ_G0001545.1 mouse_genomes_project 5 63340776 63342251 - TEC TEC MGP_BALBcJ_T0008362.1 MGP_BALBcJ_G0006785.1 mouse_genomes_project 5 126632446 126664797 + Gm42954 lincRNA lincRNA MGP_BALBcJ_T0001805.1 MGP_BALBcJ_G0001720.1 mouse_genomes_project 5 122249345 122252231 - TEC TEC MGP_BALBcJ_T0001857.1 MGP_BALBcJ_G0001771.1 mouse_genomes_project 5 131819190 131821429 - TEC TEC MGP_BALBcJ_T0072185.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72561742 72649706 - MGP_BALBcJ_P0072185 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072186.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72561742 72649705 - MGP_BALBcJ_P0072186 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072187.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72561742 72657823 - MGP_BALBcJ_P0072187 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072188.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72561974 72649691 - MGP_BALBcJ_P0072188 Lnx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072190.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72566391 72649633 - MGP_BALBcJ_P0072190 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072191.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72566391 72649706 - MGP_BALBcJ_P0072191 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072192.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72566391 72649462 - MGP_BALBcJ_P0072192 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072193.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72566391 72675026 - MGP_BALBcJ_P0072193 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0072194.1 MGP_BALBcJ_G0029611.1 mouse_genomes_project 5 72567063 72594094 - MGP_BALBcJ_P0072194 Lnx1 protein_coding protein_coding MGP_BALBcJ_T0070410.1 MGP_BALBcJ_G0029313.1 mouse_genomes_project 5 21660152 21678949 + MGP_BALBcJ_P0070410 Nupl2 protein_coding protein_coding MGP_BALBcJ_T0070411.1 MGP_BALBcJ_G0029313.1 mouse_genomes_project 5 21660189 21677770 + MGP_BALBcJ_P0070411 Nupl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070412.1 MGP_BALBcJ_G0029313.1 mouse_genomes_project 5 21662697 21665071 + Nupl2 protein_coding retained_intron MGP_BALBcJ_T0070413.1 MGP_BALBcJ_G0029313.1 mouse_genomes_project 5 21673130 21676365 + Nupl2 protein_coding retained_intron MGP_BALBcJ_T0099949.1 MGP_BALBcJ_G0037985.1 mouse_genomes_project 5 94522187 94522294 + Gm25937 snRNA snRNA MGP_BALBcJ_T0001642.1 MGP_BALBcJ_G0001558.1 mouse_genomes_project 5 63840784 63845300 + TEC TEC MGP_BALBcJ_T0099947.1 MGP_BALBcJ_G0037983.1 mouse_genomes_project 5 90652853 90652972 + Gm23031 snRNA snRNA MGP_BALBcJ_T0101230.1 MGP_BALBcJ_G0039266.1 mouse_genomes_project 5 147208147 147208218 + Gm25091 snoRNA snoRNA MGP_BALBcJ_T0008145.1 MGP_BALBcJ_G0006636.1 mouse_genomes_project 5 72058028 72060373 + Dancr lincRNA lincRNA MGP_BALBcJ_T0008146.1 MGP_BALBcJ_G0006636.1 mouse_genomes_project 5 72058028 72060372 + Dancr lincRNA lincRNA MGP_BALBcJ_T0015102.1 MGP_BALBcJ_G0013199.1 mouse_genomes_project 5 110341418 110342089 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001804.1 MGP_BALBcJ_G0001719.1 mouse_genomes_project 5 122240170 122242332 - TEC TEC MGP_BALBcJ_T0001874.1 MGP_BALBcJ_G0001787.1 mouse_genomes_project 5 134368075 134369540 - TEC TEC MGP_BALBcJ_T0014904.1 MGP_BALBcJ_G0013001.1 mouse_genomes_project 5 27389364 27390584 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101712.1 MGP_BALBcJ_G0039689.1 mouse_genomes_project 5 43417273 43418152 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0072480.1 MGP_BALBcJ_G0029675.1 mouse_genomes_project 5 86272099 86277968 + MGP_BALBcJ_P0072480 Smr3a protein_coding protein_coding MGP_BALBcJ_T0072481.1 MGP_BALBcJ_G0029675.1 mouse_genomes_project 5 86272103 86277971 + MGP_BALBcJ_P0072481 Smr3a protein_coding protein_coding MGP_BALBcJ_T0008187.1 MGP_BALBcJ_G0006672.1 mouse_genomes_project 5 95576093 95591341 + Gm8013 lincRNA lincRNA MGP_BALBcJ_T0004798.1 MGP_BALBcJ_G0004137.1 mouse_genomes_project 5 121805404 121814519 + Gm15637 antisense antisense MGP_BALBcJ_T0014921.1 MGP_BALBcJ_G0013018.1 mouse_genomes_project 5 31999998 32000457 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099977.1 MGP_BALBcJ_G0038013.1 mouse_genomes_project 5 138431867 138431974 + Gm25525 snRNA snRNA MGP_BALBcJ_T0010723.1 MGP_BALBcJ_G0008848.1 mouse_genomes_project 5 147664069 147664179 - Mir7k miRNA miRNA MGP_BALBcJ_T0098976.1 MGP_BALBcJ_G0037023.1 mouse_genomes_project 5 129568069 129569410 + Gm15903 sense_intronic sense_intronic MGP_BALBcJ_T0098977.1 MGP_BALBcJ_G0037023.1 mouse_genomes_project 5 129569196 129572712 + Gm15903 sense_intronic sense_intronic MGP_BALBcJ_T0073859.1 MGP_BALBcJ_G0029972.1 mouse_genomes_project 5 118185849 118345513 + Med13l protein_coding retained_intron MGP_BALBcJ_T0073860.1 MGP_BALBcJ_G0029972.1 mouse_genomes_project 5 118185889 118390829 + MGP_BALBcJ_P0073860 Med13l protein_coding protein_coding MGP_BALBcJ_T0073861.1 MGP_BALBcJ_G0029972.1 mouse_genomes_project 5 118185909 118389306 + MGP_BALBcJ_P0073861 Med13l protein_coding protein_coding MGP_BALBcJ_T0073862.1 MGP_BALBcJ_G0029972.1 mouse_genomes_project 5 118186766 118219040 + Med13l protein_coding processed_transcript MGP_BALBcJ_T0073863.1 MGP_BALBcJ_G0029972.1 mouse_genomes_project 5 118372742 118389306 + Med13l protein_coding retained_intron MGP_BALBcJ_T0073864.1 MGP_BALBcJ_G0029972.1 mouse_genomes_project 5 118375750 118389306 + Med13l protein_coding retained_intron MGP_BALBcJ_T0072485.1 MGP_BALBcJ_G0029679.1 mouse_genomes_project 5 86612355 86629540 + MGP_BALBcJ_P0072485 Gm7714 protein_coding protein_coding MGP_BALBcJ_T0001690.1 MGP_BALBcJ_G0001605.1 mouse_genomes_project 5 72057100 72058120 - TEC TEC MGP_BALBcJ_T0072946.1 MGP_BALBcJ_G0029786.1 mouse_genomes_project 5 102928931 102938591 + MGP_BALBcJ_P0072946 Dspp protein_coding protein_coding MGP_BALBcJ_T0075820.1 MGP_BALBcJ_G0030341.1 mouse_genomes_project 5 145294457 145320273 + MGP_BALBcJ_P0075820 Arpc1a protein_coding protein_coding MGP_BALBcJ_T0075821.1 MGP_BALBcJ_G0030341.1 mouse_genomes_project 5 145294511 145307140 + Arpc1a protein_coding processed_transcript MGP_BALBcJ_T0075822.1 MGP_BALBcJ_G0030341.1 mouse_genomes_project 5 145294533 145320268 + MGP_BALBcJ_P0075822 Arpc1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075823.1 MGP_BALBcJ_G0030341.1 mouse_genomes_project 5 145294726 145308185 + MGP_BALBcJ_P0075823 Arpc1a protein_coding protein_coding MGP_BALBcJ_T0075824.1 MGP_BALBcJ_G0030341.1 mouse_genomes_project 5 145307213 145309835 + Arpc1a protein_coding retained_intron MGP_BALBcJ_T0075825.1 MGP_BALBcJ_G0030341.1 mouse_genomes_project 5 145315780 145320104 + Arpc1a protein_coding retained_intron MGP_BALBcJ_T0074120.1 MGP_BALBcJ_G0030023.1 mouse_genomes_project 5 122084754 122115655 - MGP_BALBcJ_P0074120 Rad9b protein_coding protein_coding MGP_BALBcJ_T0074121.1 MGP_BALBcJ_G0030023.1 mouse_genomes_project 5 122087037 122112717 - MGP_BALBcJ_P0074121 Rad9b protein_coding protein_coding MGP_BALBcJ_T0074122.1 MGP_BALBcJ_G0030023.1 mouse_genomes_project 5 122087039 122115656 - MGP_BALBcJ_P0074122 Rad9b protein_coding protein_coding MGP_BALBcJ_T0074123.1 MGP_BALBcJ_G0030023.1 mouse_genomes_project 5 122112694 122114208 - MGP_BALBcJ_P0074123 Rad9b protein_coding protein_coding MGP_BALBcJ_T0074124.1 MGP_BALBcJ_G0030023.1 mouse_genomes_project 5 122113917 122115643 - Rad9b protein_coding retained_intron MGP_BALBcJ_T0004653.1 MGP_BALBcJ_G0004030.1 mouse_genomes_project 5 33423200 33425131 + Gm15650 antisense antisense MGP_BALBcJ_T0004829.1 MGP_BALBcJ_G0004159.1 mouse_genomes_project 5 134401948 134409591 + Gm42884 antisense antisense MGP_BALBcJ_T0075773.1 MGP_BALBcJ_G0030331.1 mouse_genomes_project 5 144238196 144342693 + MGP_BALBcJ_P0075773 Lmtk2 protein_coding protein_coding MGP_BALBcJ_T0072925.1 MGP_BALBcJ_G0029780.1 mouse_genomes_project 5 102614412 102638718 - MGP_BALBcJ_P0072925 Klhl8 protein_coding protein_coding MGP_BALBcJ_T0072926.1 MGP_BALBcJ_G0029780.1 mouse_genomes_project 5 102614412 102638718 - MGP_BALBcJ_P0072926 Klhl8 protein_coding protein_coding MGP_BALBcJ_T0072927.1 MGP_BALBcJ_G0029780.1 mouse_genomes_project 5 102614489 102662968 - MGP_BALBcJ_P0072927 Klhl8 protein_coding protein_coding MGP_BALBcJ_T0072928.1 MGP_BALBcJ_G0029780.1 mouse_genomes_project 5 102614519 102638718 - MGP_BALBcJ_P0072928 Klhl8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072929.1 MGP_BALBcJ_G0029780.1 mouse_genomes_project 5 102622749 102626809 - Klhl8 protein_coding retained_intron MGP_BALBcJ_T0008347.1 MGP_BALBcJ_G0006777.1 mouse_genomes_project 5 125127414 125137392 + Gm42485 lincRNA lincRNA MGP_BALBcJ_T0074282.1 MGP_BALBcJ_G0030045.1 mouse_genomes_project 5 123128696 123159031 + Bcl7a protein_coding processed_transcript MGP_BALBcJ_T0074283.1 MGP_BALBcJ_G0030045.1 mouse_genomes_project 5 123129310 123159937 + MGP_BALBcJ_P0074283 Bcl7a protein_coding protein_coding MGP_BALBcJ_T0074284.1 MGP_BALBcJ_G0030045.1 mouse_genomes_project 5 123129362 123145504 + MGP_BALBcJ_P0074284 Bcl7a protein_coding protein_coding MGP_BALBcJ_T0072948.1 MGP_BALBcJ_G0029788.1 mouse_genomes_project 5 103054600 103066937 + MGP_BALBcJ_P0072948 Ibsp protein_coding protein_coding MGP_BALBcJ_T0014833.1 MGP_BALBcJ_G0012930.1 mouse_genomes_project 5 6383295 6383537 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098954.1 MGP_BALBcJ_G0037001.1 mouse_genomes_project 5 1814361 1816097 - Gm43113 sense_intronic sense_intronic MGP_BALBcJ_T0010660.1 MGP_BALBcJ_G0008785.1 mouse_genomes_project 5 45899802 45899912 + Mir218-1 miRNA miRNA MGP_BALBcJ_T0073956.1 MGP_BALBcJ_G0029998.1 mouse_genomes_project 5 120848676 120910256 - MGP_BALBcJ_P0073956 Ptpn11 protein_coding protein_coding MGP_BALBcJ_T0073957.1 MGP_BALBcJ_G0029998.1 mouse_genomes_project 5 120848678 120910226 - Ptpn11 protein_coding retained_intron MGP_BALBcJ_T0073958.1 MGP_BALBcJ_G0029998.1 mouse_genomes_project 5 120848684 120910188 - MGP_BALBcJ_P0073958 Ptpn11 protein_coding protein_coding MGP_BALBcJ_T0073959.1 MGP_BALBcJ_G0029998.1 mouse_genomes_project 5 120851983 120861778 - Ptpn11 protein_coding processed_transcript MGP_BALBcJ_T0070707.1 MGP_BALBcJ_G0029373.1 mouse_genomes_project 5 28357356 28409565 + MGP_BALBcJ_P0070707 Mapre3 protein_coding protein_coding MGP_BALBcJ_T0070708.1 MGP_BALBcJ_G0029373.1 mouse_genomes_project 5 28357448 28409518 + Mapre3 protein_coding retained_intron MGP_BALBcJ_T0070709.1 MGP_BALBcJ_G0029373.1 mouse_genomes_project 5 28357469 28409518 + MGP_BALBcJ_P0070709 Mapre3 protein_coding protein_coding MGP_BALBcJ_T0070710.1 MGP_BALBcJ_G0029373.1 mouse_genomes_project 5 28357475 28406036 + Mapre3 protein_coding retained_intron MGP_BALBcJ_T0070711.1 MGP_BALBcJ_G0029373.1 mouse_genomes_project 5 28397257 28406817 + MGP_BALBcJ_P0070711 Mapre3 protein_coding protein_coding MGP_BALBcJ_T0070712.1 MGP_BALBcJ_G0029373.1 mouse_genomes_project 5 28407980 28408714 + Mapre3 protein_coding retained_intron MGP_BALBcJ_T0008115.1 MGP_BALBcJ_G0006613.1 mouse_genomes_project 5 51041976 51052902 - Gm42745 lincRNA lincRNA MGP_BALBcJ_T0073411.1 MGP_BALBcJ_G0029889.1 mouse_genomes_project 5 112541537 112553799 - MGP_BALBcJ_P0073411 Crybb2 protein_coding protein_coding MGP_BALBcJ_T0073412.1 MGP_BALBcJ_G0029889.1 mouse_genomes_project 5 112541544 112552448 - MGP_BALBcJ_P0073412 Crybb2 protein_coding protein_coding MGP_BALBcJ_T0073413.1 MGP_BALBcJ_G0029889.1 mouse_genomes_project 5 112546817 112552139 - Crybb2 protein_coding processed_transcript MGP_BALBcJ_T0073414.1 MGP_BALBcJ_G0029889.1 mouse_genomes_project 5 112551735 112552453 - Crybb2 protein_coding processed_transcript MGP_BALBcJ_T0073415.1 MGP_BALBcJ_G0029889.1 mouse_genomes_project 5 112552373 112553176 - Crybb2 protein_coding processed_transcript MGP_BALBcJ_T0001540.1 MGP_BALBcJ_G0001458.1 mouse_genomes_project 5 42405075 42407598 - TEC TEC MGP_BALBcJ_T0101721.1 MGP_BALBcJ_G0039696.1 mouse_genomes_project 5 72289150 72289607 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0076134.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152134133 152142620 - MGP_BALBcJ_P0076134 Rfc3 protein_coding protein_coding MGP_BALBcJ_T0076135.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152134196 152135509 - Rfc3 protein_coding retained_intron MGP_BALBcJ_T0076136.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152134198 152136140 - Rfc3 protein_coding retained_intron MGP_BALBcJ_T0076137.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152134201 152142580 - Rfc3 protein_coding retained_intron MGP_BALBcJ_T0076138.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152135793 152142586 - Rfc3 protein_coding retained_intron MGP_BALBcJ_T0076139.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152138344 152142573 - Rfc3 protein_coding retained_intron MGP_BALBcJ_T0076140.1 MGP_BALBcJ_G0030400.1 mouse_genomes_project 5 152140944 152142605 - Rfc3 protein_coding retained_intron MGP_BALBcJ_T0073210.1 MGP_BALBcJ_G0029848.1 mouse_genomes_project 5 108475434 108486713 - MGP_BALBcJ_P0073210 protein_coding protein_coding MGP_BALBcJ_T0074119.1 MGP_BALBcJ_G0030022.1 mouse_genomes_project 5 122045184 122082406 + MGP_BALBcJ_P0074119 Pptc7 protein_coding protein_coding MGP_BALBcJ_T0072836.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99244156 99273438 + MGP_BALBcJ_P0072836 Cops4 protein_coding protein_coding MGP_BALBcJ_T0072837.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99244290 99258090 + Cops4 protein_coding retained_intron MGP_BALBcJ_T0072838.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99244304 99263465 + MGP_BALBcJ_P0072838 Cops4 protein_coding protein_coding MGP_BALBcJ_T0072839.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99244319 99259386 + MGP_BALBcJ_P0072839 Cops4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072840.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99244584 99263351 + MGP_BALBcJ_P0072840 Cops4 protein_coding protein_coding MGP_BALBcJ_T0072841.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99254637 99269596 + MGP_BALBcJ_P0072841 Cops4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072842.1 MGP_BALBcJ_G0029763.1 mouse_genomes_project 5 99258236 99273415 + Cops4 protein_coding retained_intron MGP_BALBcJ_T0076019.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149639912 149670908 + MGP_BALBcJ_P0076019 Uspl1 protein_coding protein_coding MGP_BALBcJ_T0076020.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149639923 149649573 + MGP_BALBcJ_P0076020 Uspl1 protein_coding protein_coding MGP_BALBcJ_T0076021.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149639923 149670908 + MGP_BALBcJ_P0076021 Uspl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076022.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149640026 149649340 + Uspl1 protein_coding processed_transcript MGP_BALBcJ_T0076023.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149641498 149644250 + Uspl1 protein_coding retained_intron MGP_BALBcJ_T0076024.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149643020 149670919 + MGP_BALBcJ_P0076024 Uspl1 protein_coding protein_coding MGP_BALBcJ_T0076025.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149644104 149645386 + Uspl1 protein_coding retained_intron MGP_BALBcJ_T0076026.1 MGP_BALBcJ_G0030382.1 mouse_genomes_project 5 149646581 149670912 + Uspl1 protein_coding retained_intron MGP_BALBcJ_T0008312.1 MGP_BALBcJ_G0006753.1 mouse_genomes_project 5 118503311 118504700 - Gm43782 lincRNA lincRNA MGP_BALBcJ_T0073906.1 MGP_BALBcJ_G0029982.1 mouse_genomes_project 5 120252136 120270337 + MGP_BALBcJ_P0073906 Iqcd protein_coding protein_coding MGP_BALBcJ_T0073907.1 MGP_BALBcJ_G0029982.1 mouse_genomes_project 5 120252143 120270341 + MGP_BALBcJ_P0073907 Iqcd protein_coding protein_coding MGP_BALBcJ_T0074630.1 MGP_BALBcJ_G0030105.1 mouse_genomes_project 5 129524364 129534442 - Sept14 protein_coding processed_transcript MGP_BALBcJ_T0074631.1 MGP_BALBcJ_G0030105.1 mouse_genomes_project 5 129524375 129545159 - MGP_BALBcJ_P0074631 Sept14 protein_coding protein_coding MGP_BALBcJ_T0074632.1 MGP_BALBcJ_G0030105.1 mouse_genomes_project 5 129524412 129548406 - MGP_BALBcJ_P0074632 Sept14 protein_coding protein_coding MGP_BALBcJ_T0014842.1 MGP_BALBcJ_G0012939.1 mouse_genomes_project 5 11186487 11187790 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018111.1 MGP_BALBcJ_G0015538.1 mouse_genomes_project 5 55347340 55506169 - 4932441J04Rik processed_transcript antisense MGP_BALBcJ_T0018112.1 MGP_BALBcJ_G0015538.1 mouse_genomes_project 5 55504387 55508451 - 4932441J04Rik processed_transcript retained_intron MGP_BALBcJ_T0004825.1 MGP_BALBcJ_G0004155.1 mouse_genomes_project 5 131435572 131444879 + 2810432F15Rik antisense antisense MGP_BALBcJ_T0015074.1 MGP_BALBcJ_G0013171.1 mouse_genomes_project 5 104938149 104938759 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072195.1 MGP_BALBcJ_G0029612.1 mouse_genomes_project 5 72963228 73009876 - MGP_BALBcJ_P0072195 Chic2 protein_coding protein_coding MGP_BALBcJ_T0072196.1 MGP_BALBcJ_G0029612.1 mouse_genomes_project 5 72976429 73009414 - Chic2 protein_coding retained_intron MGP_BALBcJ_T0004624.1 MGP_BALBcJ_G0004005.1 mouse_genomes_project 5 18320623 18326026 + A630072M18Rik antisense antisense MGP_BALBcJ_T0004843.1 MGP_BALBcJ_G0004171.1 mouse_genomes_project 5 137838862 137839384 + Gm43495 antisense antisense MGP_BALBcJ_T0014901.1 MGP_BALBcJ_G0012998.1 mouse_genomes_project 5 27270925 27271304 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018086.1 MGP_BALBcJ_G0015530.1 mouse_genomes_project 5 28116959 28131816 - Gm9899 processed_transcript lincRNA MGP_BALBcJ_T0018087.1 MGP_BALBcJ_G0015530.1 mouse_genomes_project 5 28120439 28120998 - Gm9899 processed_transcript pseudogene MGP_BALBcJ_T0018088.1 MGP_BALBcJ_G0015530.1 mouse_genomes_project 5 28120921 28122828 - Gm9899 processed_transcript retained_intron MGP_BALBcJ_T0071760.1 MGP_BALBcJ_G0029540.1 mouse_genomes_project 5 61698057 61782415 + MGP_BALBcJ_P0071760 0610040J01Rik protein_coding protein_coding MGP_BALBcJ_T0071761.1 MGP_BALBcJ_G0029540.1 mouse_genomes_project 5 61698214 61781357 + MGP_BALBcJ_P0071761 0610040J01Rik protein_coding protein_coding MGP_BALBcJ_T0071762.1 MGP_BALBcJ_G0029540.1 mouse_genomes_project 5 61757700 61781056 + MGP_BALBcJ_P0071762 0610040J01Rik protein_coding protein_coding MGP_BALBcJ_T0071763.1 MGP_BALBcJ_G0029540.1 mouse_genomes_project 5 61758867 61781319 + MGP_BALBcJ_P0071763 0610040J01Rik protein_coding protein_coding MGP_BALBcJ_T0071822.1 MGP_BALBcJ_G0029552.1 mouse_genomes_project 5 63257818 63294197 + MGP_BALBcJ_P0071822 Klb protein_coding protein_coding MGP_BALBcJ_T0071823.1 MGP_BALBcJ_G0029552.1 mouse_genomes_project 5 63257911 63259750 + Klb protein_coding retained_intron MGP_BALBcJ_T0071824.1 MGP_BALBcJ_G0029552.1 mouse_genomes_project 5 63257912 63289731 + MGP_BALBcJ_P0071824 Klb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072005.1 MGP_BALBcJ_G0029577.1 mouse_genomes_project 5 65963174 66085121 + MGP_BALBcJ_P0072005 Grxcr1 protein_coding protein_coding MGP_BALBcJ_T0001896.1 MGP_BALBcJ_G0001809.1 mouse_genomes_project 5 144384380 144386175 + TEC TEC MGP_BALBcJ_T0073033.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105928865 105950677 + MGP_BALBcJ_P0073033 Cdc7 protein_coding protein_coding MGP_BALBcJ_T0073034.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105928865 105950678 + MGP_BALBcJ_P0073034 Cdc7 protein_coding protein_coding MGP_BALBcJ_T0073035.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105928924 105950678 + MGP_BALBcJ_P0073035 Cdc7 protein_coding protein_coding MGP_BALBcJ_T0073036.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105928935 105950678 + Cdc7 protein_coding retained_intron MGP_BALBcJ_T0073037.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105929104 105950677 + MGP_BALBcJ_P0073037 Cdc7 protein_coding protein_coding MGP_BALBcJ_T0073038.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105929561 105949601 + MGP_BALBcJ_P0073038 Cdc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073039.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105939079 105939726 + Cdc7 protein_coding processed_transcript MGP_BALBcJ_T0073040.1 MGP_BALBcJ_G0029809.1 mouse_genomes_project 5 105939771 105944999 + Cdc7 protein_coding retained_intron MGP_BALBcJ_T0008314.1 MGP_BALBcJ_G0006755.1 mouse_genomes_project 5 118581027 118590185 + 4930413E15Rik lincRNA lincRNA MGP_BALBcJ_T0014915.1 MGP_BALBcJ_G0013012.1 mouse_genomes_project 5 30926169 30927214 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072412.1 MGP_BALBcJ_G0029655.1 mouse_genomes_project 5 85257405 85284394 - MGP_BALBcJ_P0072412 Ugt2b36 protein_coding protein_coding MGP_BALBcJ_T0072413.1 MGP_BALBcJ_G0029655.1 mouse_genomes_project 5 85257916 85284387 - MGP_BALBcJ_P0072413 Ugt2b36 protein_coding protein_coding MGP_BALBcJ_T0072414.1 MGP_BALBcJ_G0029655.1 mouse_genomes_project 5 85257919 85282996 - Ugt2b36 protein_coding retained_intron MGP_BALBcJ_T0072415.1 MGP_BALBcJ_G0029655.1 mouse_genomes_project 5 85273007 85284385 - MGP_BALBcJ_P0072415 Ugt2b36 protein_coding protein_coding MGP_BALBcJ_T0004771.1 MGP_BALBcJ_G0004118.1 mouse_genomes_project 5 115593253 115599721 + Gm14508 antisense antisense MGP_BALBcJ_T0010644.1 MGP_BALBcJ_G0008769.1 mouse_genomes_project 5 622406 622474 + Gm22926 miRNA miRNA MGP_BALBcJ_T0001558.1 MGP_BALBcJ_G0001476.1 mouse_genomes_project 5 46463950 46466217 - TEC TEC MGP_BALBcJ_T0001513.1 MGP_BALBcJ_G0001431.1 mouse_genomes_project 5 35705202 35705497 - TEC TEC MGP_BALBcJ_T0075141.1 MGP_BALBcJ_G0030193.1 mouse_genomes_project 5 136966931 136978033 - MGP_BALBcJ_P0075141 Ap1s1 protein_coding protein_coding MGP_BALBcJ_T0075142.1 MGP_BALBcJ_G0030193.1 mouse_genomes_project 5 136967280 136969590 - Ap1s1 protein_coding retained_intron MGP_BALBcJ_T0075143.1 MGP_BALBcJ_G0030193.1 mouse_genomes_project 5 136969318 136977693 - MGP_BALBcJ_P0075143 Ap1s1 protein_coding protein_coding MGP_BALBcJ_T0075144.1 MGP_BALBcJ_G0030193.1 mouse_genomes_project 5 136969335 136977940 - MGP_BALBcJ_P0075144 Ap1s1 protein_coding protein_coding MGP_BALBcJ_T0075145.1 MGP_BALBcJ_G0030193.1 mouse_genomes_project 5 136974965 136977305 - MGP_BALBcJ_P0075145 Ap1s1 protein_coding protein_coding MGP_BALBcJ_T0015150.1 MGP_BALBcJ_G0013247.1 mouse_genomes_project 5 137895751 137896493 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101200.1 MGP_BALBcJ_G0039236.1 mouse_genomes_project 5 60385564 60385696 - Gm24079 snoRNA snoRNA MGP_BALBcJ_T0070682.1 MGP_BALBcJ_G0029369.1 mouse_genomes_project 5 28131366 28169340 + MGP_BALBcJ_P0070682 Kcnk3 protein_coding protein_coding MGP_BALBcJ_T0070683.1 MGP_BALBcJ_G0029369.1 mouse_genomes_project 5 28165119 28165979 + Kcnk3 protein_coding processed_transcript MGP_BALBcJ_T0070505.1 MGP_BALBcJ_G0029330.1 mouse_genomes_project 5 22176881 22201724 + MGP_BALBcJ_P0070505 Nub1 protein_coding protein_coding MGP_BALBcJ_T0070506.1 MGP_BALBcJ_G0029330.1 mouse_genomes_project 5 22177173 22201726 + MGP_BALBcJ_P0070506 Nub1 protein_coding protein_coding MGP_BALBcJ_T0070507.1 MGP_BALBcJ_G0029330.1 mouse_genomes_project 5 22177336 22201724 + Nub1 protein_coding retained_intron MGP_BALBcJ_T0098967.1 MGP_BALBcJ_G0037014.1 mouse_genomes_project 5 91072496 91073734 + Gm20500 sense_intronic sense_intronic MGP_BALBcJ_T0075039.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004006 136035594 + MGP_BALBcJ_P0075039 Rasa4 protein_coding protein_coding MGP_BALBcJ_T0075040.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004044 136035594 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075041.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004088 136035589 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075042.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004088 136033691 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075043.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004089 136014967 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075044.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004108 136035589 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075045.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004122 136035594 + MGP_BALBcJ_P0075045 Rasa4 protein_coding protein_coding MGP_BALBcJ_T0075046.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136004179 136031241 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075047.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136005160 136012785 + Rasa4 protein_coding processed_transcript MGP_BALBcJ_T0075048.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136012622 136014092 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0075049.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136017094 136026025 + MGP_BALBcJ_P0075049 Rasa4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075050.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136027623 136029763 + MGP_BALBcJ_P0075050 Rasa4 protein_coding protein_coding MGP_BALBcJ_T0075051.1 MGP_BALBcJ_G0030177.1 mouse_genomes_project 5 136034665 136035264 + Rasa4 protein_coding retained_intron MGP_BALBcJ_T0099934.1 MGP_BALBcJ_G0037970.1 mouse_genomes_project 5 73339253 73339358 - Gm22084 snRNA snRNA MGP_BALBcJ_T0004834.1 MGP_BALBcJ_G0004163.1 mouse_genomes_project 5 134891108 134892248 - Abhd11os antisense antisense MGP_BALBcJ_T0004835.1 MGP_BALBcJ_G0004163.1 mouse_genomes_project 5 134891116 134892149 - Abhd11os antisense antisense MGP_BALBcJ_T0014916.1 MGP_BALBcJ_G0013013.1 mouse_genomes_project 5 31366170 31366420 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004831.1 MGP_BALBcJ_G0004161.1 mouse_genomes_project 5 134622788 134700472 + Gm43278 antisense antisense MGP_BALBcJ_T0072100.1 MGP_BALBcJ_G0029598.1 mouse_genomes_project 5 70968686 70975757 + MGP_BALBcJ_P0072100 Zar1 protein_coding protein_coding MGP_BALBcJ_T0072101.1 MGP_BALBcJ_G0029598.1 mouse_genomes_project 5 70969186 70975754 + MGP_BALBcJ_P0072101 Zar1 protein_coding protein_coding MGP_BALBcJ_T0072102.1 MGP_BALBcJ_G0029598.1 mouse_genomes_project 5 70973570 70976065 + Zar1 protein_coding retained_intron MGP_BALBcJ_T0075916.1 MGP_BALBcJ_G0030363.1 mouse_genomes_project 5 147321871 147328814 + MGP_BALBcJ_P0075916 Gtf3a protein_coding protein_coding MGP_BALBcJ_T0075917.1 MGP_BALBcJ_G0030363.1 mouse_genomes_project 5 147321912 147328803 + Gtf3a protein_coding retained_intron MGP_BALBcJ_T0075918.1 MGP_BALBcJ_G0030363.1 mouse_genomes_project 5 147321919 147328806 + MGP_BALBcJ_P0075918 Gtf3a protein_coding protein_coding MGP_BALBcJ_T0075919.1 MGP_BALBcJ_G0030363.1 mouse_genomes_project 5 147323206 147328803 + Gtf3a protein_coding retained_intron MGP_BALBcJ_T0075963.1 MGP_BALBcJ_G0030373.1 mouse_genomes_project 5 147948975 148120605 - MGP_BALBcJ_P0075963 Flt1 protein_coding protein_coding MGP_BALBcJ_T0075964.1 MGP_BALBcJ_G0030373.1 mouse_genomes_project 5 147991946 148022357 - Flt1 protein_coding processed_transcript MGP_BALBcJ_T0075965.1 MGP_BALBcJ_G0030373.1 mouse_genomes_project 5 148002047 148003147 - Flt1 protein_coding processed_transcript MGP_BALBcJ_T0075966.1 MGP_BALBcJ_G0030373.1 mouse_genomes_project 5 148023097 148120582 - MGP_BALBcJ_P0075966 Flt1 protein_coding protein_coding MGP_BALBcJ_T0075967.1 MGP_BALBcJ_G0030373.1 mouse_genomes_project 5 148033832 148035856 - Flt1 protein_coding retained_intron MGP_BALBcJ_T0075968.1 MGP_BALBcJ_G0030373.1 mouse_genomes_project 5 148043356 148120582 - Flt1 protein_coding processed_transcript MGP_BALBcJ_T0001734.1 MGP_BALBcJ_G0001649.1 mouse_genomes_project 5 102632347 102632663 - TEC TEC MGP_BALBcJ_T0001610.1 MGP_BALBcJ_G0001527.1 mouse_genomes_project 5 55755291 55756486 + TEC TEC MGP_BALBcJ_T0008178.1 MGP_BALBcJ_G0006663.1 mouse_genomes_project 5 89594353 89620076 - Gm19619 lincRNA lincRNA MGP_BALBcJ_T0001728.1 MGP_BALBcJ_G0001643.1 mouse_genomes_project 5 99539710 99540786 - TEC TEC MGP_BALBcJ_T0073493.1 MGP_BALBcJ_G0029904.1 mouse_genomes_project 5 113498049 113521432 + MGP_BALBcJ_P0073493 Dao protein_coding protein_coding MGP_BALBcJ_T0073494.1 MGP_BALBcJ_G0029904.1 mouse_genomes_project 5 113498230 113521199 + MGP_BALBcJ_P0073494 Dao protein_coding protein_coding MGP_BALBcJ_T0073495.1 MGP_BALBcJ_G0029904.1 mouse_genomes_project 5 113499155 113521199 + MGP_BALBcJ_P0073495 Dao protein_coding protein_coding MGP_BALBcJ_T0073496.1 MGP_BALBcJ_G0029904.1 mouse_genomes_project 5 113505076 113511296 + MGP_BALBcJ_P0073496 Dao protein_coding protein_coding MGP_BALBcJ_T0073497.1 MGP_BALBcJ_G0029904.1 mouse_genomes_project 5 113512889 113515802 + Dao protein_coding retained_intron MGP_BALBcJ_T0001588.1 MGP_BALBcJ_G0001505.1 mouse_genomes_project 5 49527093 49528322 - TEC TEC MGP_BALBcJ_T0015159.1 MGP_BALBcJ_G0013256.1 mouse_genomes_project 5 140671077 140671481 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001572.1 MGP_BALBcJ_G0001489.1 mouse_genomes_project 5 46752417 46755314 - TEC TEC MGP_BALBcJ_T0001450.1 MGP_BALBcJ_G0001371.1 mouse_genomes_project 5 10883708 10885907 + TEC TEC MGP_BALBcJ_T0015083.1 MGP_BALBcJ_G0013180.1 mouse_genomes_project 5 106813568 106813854 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014899.1 MGP_BALBcJ_G0012996.1 mouse_genomes_project 5 27090222 27090579 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070877.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797441 28798948 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0070878.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797456 28798948 + MGP_BALBcJ_P0070878 Krtcap3 protein_coding protein_coding MGP_BALBcJ_T0070879.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797466 28798642 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0070880.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797472 28798953 + MGP_BALBcJ_P0070880 Krtcap3 protein_coding protein_coding MGP_BALBcJ_T0070881.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797475 28798948 + MGP_BALBcJ_P0070881 Krtcap3 protein_coding protein_coding MGP_BALBcJ_T0070882.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797512 28798449 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0070883.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28797677 28798747 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0070884.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28798086 28798950 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0070885.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28798230 28798948 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0070886.1 MGP_BALBcJ_G0029398.1 mouse_genomes_project 5 28798305 28798948 + Krtcap3 protein_coding retained_intron MGP_BALBcJ_T0072428.1 MGP_BALBcJ_G0029664.1 mouse_genomes_project 5 85807780 85825413 - MGP_BALBcJ_P0072428 Sult1e1 protein_coding protein_coding MGP_BALBcJ_T0008342.1 MGP_BALBcJ_G0006773.1 mouse_genomes_project 5 123831853 123885254 + Gm34086 lincRNA lincRNA MGP_BALBcJ_T0004650.1 MGP_BALBcJ_G0004027.1 mouse_genomes_project 5 32376681 32404121 - Gm42560 antisense antisense MGP_BALBcJ_T0010663.1 MGP_BALBcJ_G0008788.1 mouse_genomes_project 5 61982997 61983075 - Gm23967 miRNA miRNA MGP_BALBcJ_T0075517.1 MGP_BALBcJ_G0030273.1 mouse_genomes_project 5 139648455 139653098 + MGP_BALBcJ_P0075517 Uncx protein_coding protein_coding MGP_BALBcJ_T0075518.1 MGP_BALBcJ_G0030273.1 mouse_genomes_project 5 139648859 139650230 + MGP_BALBcJ_P0075518 Uncx protein_coding protein_coding MGP_BALBcJ_T0098956.1 MGP_BALBcJ_G0037003.1 mouse_genomes_project 5 2170428 2175757 - Gm10484 sense_intronic sense_intronic MGP_BALBcJ_T0070561.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25269844 25320846 - MGP_BALBcJ_P0070561 Paxip1 protein_coding protein_coding MGP_BALBcJ_T0070562.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25273839 25281045 - Paxip1 protein_coding retained_intron MGP_BALBcJ_T0070563.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25289022 25295024 - Paxip1 protein_coding retained_intron MGP_BALBcJ_T0070564.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25301764 25320691 - MGP_BALBcJ_P0070564 Paxip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070565.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25310735 25320987 - Paxip1 protein_coding processed_transcript MGP_BALBcJ_T0070566.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25312866 25320679 - Paxip1 protein_coding retained_intron MGP_BALBcJ_T0070567.1 MGP_BALBcJ_G0029343.1 mouse_genomes_project 5 25315832 25319660 - Paxip1 protein_coding retained_intron MGP_BALBcJ_T0004762.1 MGP_BALBcJ_G0004112.1 mouse_genomes_project 5 114222040 114222607 - Gm42789 antisense antisense MGP_BALBcJ_T0074837.1 MGP_BALBcJ_G0030135.1 mouse_genomes_project 5 134336344 134402326 - MGP_BALBcJ_P0074837 Clip2 protein_coding protein_coding MGP_BALBcJ_T0074838.1 MGP_BALBcJ_G0030135.1 mouse_genomes_project 5 134336348 134402326 - MGP_BALBcJ_P0074838 Clip2 protein_coding protein_coding MGP_BALBcJ_T0074839.1 MGP_BALBcJ_G0030135.1 mouse_genomes_project 5 134361774 134364976 - Clip2 protein_coding retained_intron MGP_BALBcJ_T0014872.1 MGP_BALBcJ_G0012969.1 mouse_genomes_project 5 20116418 20116791 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0069969.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 524372 563322 + MGP_BALBcJ_P0069969 Pex1 protein_coding protein_coding MGP_BALBcJ_T0069970.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 524372 563324 + MGP_BALBcJ_P0069970 Pex1 protein_coding protein_coding MGP_BALBcJ_T0069971.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 524505 534017 + MGP_BALBcJ_P0069971 Pex1 protein_coding protein_coding MGP_BALBcJ_T0069972.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 524677 550118 + MGP_BALBcJ_P0069972 Pex1 protein_coding protein_coding MGP_BALBcJ_T0069973.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 532976 534276 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069974.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 534356 546797 + MGP_BALBcJ_P0069974 Pex1 protein_coding protein_coding MGP_BALBcJ_T0069975.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 537773 544206 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069976.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 544983 550591 + MGP_BALBcJ_P0069976 Pex1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069977.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 545856 546843 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069978.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 550152 550555 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069979.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 553290 553928 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069981.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 561262 562003 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069982.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 561706 563053 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0069983.1 MGP_BALBcJ_G0029241.1 mouse_genomes_project 5 562242 562910 + Pex1 protein_coding retained_intron MGP_BALBcJ_T0072591.1 MGP_BALBcJ_G0029713.1 mouse_genomes_project 5 89694019 89738110 - MGP_BALBcJ_P0072591 Btc protein_coding protein_coding MGP_BALBcJ_T0072592.1 MGP_BALBcJ_G0029713.1 mouse_genomes_project 5 89694147 89737938 - Btc protein_coding retained_intron MGP_BALBcJ_T0072593.1 MGP_BALBcJ_G0029713.1 mouse_genomes_project 5 89695677 89737976 - MGP_BALBcJ_P0072593 Btc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072594.1 MGP_BALBcJ_G0029713.1 mouse_genomes_project 5 89702539 89713771 - Btc protein_coding processed_transcript MGP_BALBcJ_T0071825.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298545 63301626 - MGP_BALBcJ_P0071825 Rpl9 protein_coding protein_coding MGP_BALBcJ_T0071826.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298552 63299103 - Rpl9 protein_coding retained_intron MGP_BALBcJ_T0071827.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298552 63301194 - MGP_BALBcJ_P0071827 Rpl9 protein_coding protein_coding MGP_BALBcJ_T0071828.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298552 63301022 - MGP_BALBcJ_P0071828 Rpl9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071829.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298552 63301588 - MGP_BALBcJ_P0071829 Rpl9 protein_coding protein_coding MGP_BALBcJ_T0071830.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298553 63301587 - Rpl9 protein_coding retained_intron MGP_BALBcJ_T0071831.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298595 63299562 - Rpl9 protein_coding retained_intron MGP_BALBcJ_T0071832.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63298865 63301570 - Rpl9 protein_coding retained_intron MGP_BALBcJ_T0071833.1 MGP_BALBcJ_G0029553.1 mouse_genomes_project 5 63299105 63301180 - Rpl9 protein_coding retained_intron MGP_BALBcJ_T0072397.1 MGP_BALBcJ_G0029650.1 mouse_genomes_project 5 84884794 84925264 - MGP_BALBcJ_P0072397 Tmprss11e protein_coding protein_coding MGP_BALBcJ_T0008332.1 MGP_BALBcJ_G0006770.1 mouse_genomes_project 5 122901771 122903760 + Gm38102 lincRNA lincRNA MGP_BALBcJ_T0008336.1 MGP_BALBcJ_G0006770.1 mouse_genomes_project 5 122903590 122905525 + Gm38102 lincRNA lincRNA MGP_BALBcJ_T0008286.1 MGP_BALBcJ_G0006735.1 mouse_genomes_project 5 112629757 112639376 + Gm43095 lincRNA lincRNA MGP_BALBcJ_T0072057.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70426715 70468544 - MGP_BALBcJ_P0072057 Nfxl1 protein_coding protein_coding MGP_BALBcJ_T0072058.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70426718 70468505 - MGP_BALBcJ_P0072058 Nfxl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072059.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70426929 70430000 - Nfxl1 protein_coding retained_intron MGP_BALBcJ_T0072060.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70429554 70434900 - Nfxl1 protein_coding retained_intron MGP_BALBcJ_T0072061.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70434440 70437361 - Nfxl1 protein_coding retained_intron MGP_BALBcJ_T0072062.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70453927 70468459 - MGP_BALBcJ_P0072062 Nfxl1 protein_coding protein_coding MGP_BALBcJ_T0072063.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70458082 70468272 - Nfxl1 protein_coding retained_intron MGP_BALBcJ_T0072064.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70458084 70468508 - Nfxl1 protein_coding retained_intron MGP_BALBcJ_T0072065.1 MGP_BALBcJ_G0029589.1 mouse_genomes_project 5 70463312 70468483 - Nfxl1 protein_coding retained_intron MGP_BALBcJ_T0008111.1 MGP_BALBcJ_G0006609.1 mouse_genomes_project 5 49990518 49990795 - Gm43179 lincRNA lincRNA MGP_BALBcJ_T0073213.1 MGP_BALBcJ_G0029851.1 mouse_genomes_project 5 108753281 108757794 - MGP_BALBcJ_P0073213 Crlf2 protein_coding protein_coding MGP_BALBcJ_T0073214.1 MGP_BALBcJ_G0029851.1 mouse_genomes_project 5 108753285 108757845 - MGP_BALBcJ_P0073214 Crlf2 protein_coding protein_coding MGP_BALBcJ_T0073215.1 MGP_BALBcJ_G0029851.1 mouse_genomes_project 5 108753287 108755343 - MGP_BALBcJ_P0073215 Crlf2 protein_coding protein_coding MGP_BALBcJ_T0014937.1 MGP_BALBcJ_G0013034.1 mouse_genomes_project 5 41994076 41995969 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071453.1 MGP_BALBcJ_G0029486.1 mouse_genomes_project 5 35933068 35942535 + MGP_BALBcJ_P0071453 Tmem128 protein_coding protein_coding MGP_BALBcJ_T0071454.1 MGP_BALBcJ_G0029486.1 mouse_genomes_project 5 35933254 35935209 + Tmem128 protein_coding retained_intron MGP_BALBcJ_T0071455.1 MGP_BALBcJ_G0029486.1 mouse_genomes_project 5 35933267 35940823 + MGP_BALBcJ_P0071455 Tmem128 protein_coding protein_coding MGP_BALBcJ_T0071456.1 MGP_BALBcJ_G0029486.1 mouse_genomes_project 5 35933270 35938307 + Tmem128 protein_coding retained_intron MGP_BALBcJ_T0071457.1 MGP_BALBcJ_G0029486.1 mouse_genomes_project 5 35937810 35940820 + MGP_BALBcJ_P0071457 Tmem128 protein_coding protein_coding MGP_BALBcJ_T0004748.1 MGP_BALBcJ_G0004101.1 mouse_genomes_project 5 109601535 109602171 - Gm43136 antisense antisense MGP_BALBcJ_T0073005.1 MGP_BALBcJ_G0029805.1 mouse_genomes_project 5 105405566 105411195 - MGP_BALBcJ_P0073005 Barhl2 protein_coding protein_coding MGP_BALBcJ_T0099908.1 MGP_BALBcJ_G0037944.1 mouse_genomes_project 5 21307033 21307188 - Gm22054 snRNA snRNA MGP_BALBcJ_T0072603.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90350856 90388620 - MGP_BALBcJ_P0072603 Cdkl2 protein_coding protein_coding MGP_BALBcJ_T0072604.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90350856 90388621 - MGP_BALBcJ_P0072604 Cdkl2 protein_coding protein_coding MGP_BALBcJ_T0072605.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90352586 90388275 - MGP_BALBcJ_P0072605 Cdkl2 protein_coding protein_coding MGP_BALBcJ_T0072606.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90352605 90388251 - MGP_BALBcJ_P0072606 Cdkl2 protein_coding protein_coding MGP_BALBcJ_T0072607.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90352818 90362747 - Cdkl2 protein_coding retained_intron MGP_BALBcJ_T0072608.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90367411 90376656 - MGP_BALBcJ_P0072608 Cdkl2 protein_coding protein_coding MGP_BALBcJ_T0072609.1 MGP_BALBcJ_G0029717.1 mouse_genomes_project 5 90387845 90389467 - Cdkl2 protein_coding TEC MGP_BALBcJ_T0008370.1 MGP_BALBcJ_G0006790.1 mouse_genomes_project 5 127362830 127364190 + Gm42980 lincRNA lincRNA MGP_BALBcJ_T0001448.1 MGP_BALBcJ_G0001369.1 mouse_genomes_project 5 10804027 10806712 + TEC TEC MGP_BALBcJ_T0073949.1 MGP_BALBcJ_G0029994.1 mouse_genomes_project 5 120603678 120619030 - MGP_BALBcJ_P0073949 Oas1g protein_coding protein_coding MGP_BALBcJ_T0071574.1 MGP_BALBcJ_G0029508.1 mouse_genomes_project 5 43070486 43091011 - MGP_BALBcJ_P0071574 protein_coding protein_coding MGP_BALBcJ_T0071575.1 MGP_BALBcJ_G0029508.1 mouse_genomes_project 5 43070493 43090956 - MGP_BALBcJ_P0071575 protein_coding protein_coding MGP_BALBcJ_T0071576.1 MGP_BALBcJ_G0029508.1 mouse_genomes_project 5 43070518 43091067 - MGP_BALBcJ_P0071576 protein_coding protein_coding MGP_BALBcJ_T0071577.1 MGP_BALBcJ_G0029508.1 mouse_genomes_project 5 43070518 43091006 - MGP_BALBcJ_P0071577 protein_coding protein_coding MGP_BALBcJ_T0071578.1 MGP_BALBcJ_G0029508.1 mouse_genomes_project 5 43070518 43089008 - MGP_BALBcJ_P0071578 protein_coding protein_coding MGP_BALBcJ_T0071579.1 MGP_BALBcJ_G0029508.1 mouse_genomes_project 5 43070518 43090800 - MGP_BALBcJ_P0071579 protein_coding protein_coding MGP_BALBcJ_T0008235.1 MGP_BALBcJ_G0006706.1 mouse_genomes_project 5 105455972 105534136 - Gm28050 lincRNA lincRNA MGP_BALBcJ_T0008236.1 MGP_BALBcJ_G0006706.1 mouse_genomes_project 5 105517148 105534139 - Gm28050 lincRNA lincRNA MGP_BALBcJ_T0072019.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67473313 67490996 - MGP_BALBcJ_P0072019 Gnpda2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072020.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67475206 67492540 - MGP_BALBcJ_P0072020 Gnpda2 protein_coding protein_coding MGP_BALBcJ_T0072021.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67475375 67491032 - MGP_BALBcJ_P0072021 Gnpda2 protein_coding protein_coding MGP_BALBcJ_T0072022.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67475380 67492446 - Gnpda2 protein_coding retained_intron MGP_BALBcJ_T0072023.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67476017 67492474 - MGP_BALBcJ_P0072023 Gnpda2 protein_coding protein_coding MGP_BALBcJ_T0072024.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67476947 67492493 - MGP_BALBcJ_P0072024 Gnpda2 protein_coding protein_coding MGP_BALBcJ_T0072025.1 MGP_BALBcJ_G0029581.1 mouse_genomes_project 5 67485204 67492489 - MGP_BALBcJ_P0072025 Gnpda2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008158.1 MGP_BALBcJ_G0006647.1 mouse_genomes_project 5 74484890 74514578 + lincRNA lincRNA MGP_BALBcJ_T0008159.1 MGP_BALBcJ_G0006647.1 mouse_genomes_project 5 74485181 74514534 + lincRNA lincRNA MGP_BALBcJ_T0074942.1 MGP_BALBcJ_G0030156.1 mouse_genomes_project 5 135135576 135137869 - MGP_BALBcJ_P0074942 Fzd9 protein_coding protein_coding MGP_BALBcJ_T0001611.1 MGP_BALBcJ_G0001528.1 mouse_genomes_project 5 55759112 55761216 + TEC TEC MGP_BALBcJ_T0101185.1 MGP_BALBcJ_G0039221.1 mouse_genomes_project 5 16230487 16230615 + Gm23822 snoRNA snoRNA MGP_BALBcJ_T0001714.1 MGP_BALBcJ_G0001629.1 mouse_genomes_project 5 91435437 91436030 - TEC TEC MGP_BALBcJ_T0014869.1 MGP_BALBcJ_G0012966.1 mouse_genomes_project 5 19669572 19669954 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010713.1 MGP_BALBcJ_G0008838.1 mouse_genomes_project 5 138139505 138139593 - Mir93 miRNA miRNA MGP_BALBcJ_T0001432.1 MGP_BALBcJ_G0001353.1 mouse_genomes_project 5 2714371 2716308 + TEC TEC MGP_BALBcJ_T0001870.1 MGP_BALBcJ_G0001784.1 mouse_genomes_project 5 134009241 134010605 + TEC TEC MGP_BALBcJ_T0001871.1 MGP_BALBcJ_G0001784.1 mouse_genomes_project 5 134009253 134009852 + TEC TEC MGP_BALBcJ_T0015185.1 MGP_BALBcJ_G0013282.1 mouse_genomes_project 5 147709642 147710108 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008027.1 MGP_BALBcJ_G0006553.1 mouse_genomes_project 5 19773425 19777258 - Gm43657 lincRNA lincRNA MGP_BALBcJ_T0001872.1 MGP_BALBcJ_G0001785.1 mouse_genomes_project 5 134101871 134105541 - TEC TEC MGP_BALBcJ_T0073602.1 MGP_BALBcJ_G0029922.1 mouse_genomes_project 5 114319974 114325757 - MGP_BALBcJ_P0073602 1500011B03Rik protein_coding protein_coding MGP_BALBcJ_T0014981.1 MGP_BALBcJ_G0013078.1 mouse_genomes_project 5 62069415 62070280 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010719.1 MGP_BALBcJ_G0008844.1 mouse_genomes_project 5 141164423 141164504 + Gm44385 miRNA miRNA MGP_BALBcJ_T0015166.1 MGP_BALBcJ_G0013263.1 mouse_genomes_project 5 143649266 143649804 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014889.1 MGP_BALBcJ_G0012986.1 mouse_genomes_project 5 23024028 23024302 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072716.1 MGP_BALBcJ_G0029737.1 mouse_genomes_project 5 91612313 91621291 + MGP_BALBcJ_P0072716 Ccng2 protein_coding protein_coding MGP_BALBcJ_T0072717.1 MGP_BALBcJ_G0029737.1 mouse_genomes_project 5 91612645 91613513 + Ccng2 protein_coding processed_transcript MGP_BALBcJ_T0072718.1 MGP_BALBcJ_G0029737.1 mouse_genomes_project 5 91612657 91614774 + Ccng2 protein_coding processed_transcript MGP_BALBcJ_T0072719.1 MGP_BALBcJ_G0029737.1 mouse_genomes_project 5 91612695 91621285 + Ccng2 protein_coding retained_intron MGP_BALBcJ_T0072720.1 MGP_BALBcJ_G0029737.1 mouse_genomes_project 5 91613370 91621284 + MGP_BALBcJ_P0072720 Ccng2 protein_coding protein_coding MGP_BALBcJ_T0072721.1 MGP_BALBcJ_G0029737.1 mouse_genomes_project 5 91613765 91618551 + Ccng2 protein_coding retained_intron MGP_BALBcJ_T0001790.1 MGP_BALBcJ_G0001705.1 mouse_genomes_project 5 119233765 119236139 - TEC TEC MGP_BALBcJ_T0004861.1 MGP_BALBcJ_G0004181.1 mouse_genomes_project 5 143588353 143601563 - Gm20635 antisense antisense MGP_BALBcJ_T0008399.1 MGP_BALBcJ_G0006809.1 mouse_genomes_project 5 137626970 137632837 - Gm15498 lincRNA lincRNA MGP_BALBcJ_T0004692.1 MGP_BALBcJ_G0004060.1 mouse_genomes_project 5 65363149 65373434 + Gm26756 antisense antisense MGP_BALBcJ_T0018130.1 MGP_BALBcJ_G0015544.1 mouse_genomes_project 5 74330061 74340709 + 4930432L08Rik processed_transcript processed_transcript MGP_BALBcJ_T0070205.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10399026 10587525 + Sema3a protein_coding processed_transcript MGP_BALBcJ_T0070206.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10399104 10570249 + Sema3a protein_coding retained_intron MGP_BALBcJ_T0070207.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10399205 10802963 + Sema3a protein_coding retained_intron MGP_BALBcJ_T0070208.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10673623 10880662 + MGP_BALBcJ_P0070208 Sema3a protein_coding protein_coding MGP_BALBcJ_T0070209.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10675821 10729124 + MGP_BALBcJ_P0070209 Sema3a protein_coding protein_coding MGP_BALBcJ_T0070210.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10676130 10879022 + MGP_BALBcJ_P0070210 Sema3a protein_coding protein_coding MGP_BALBcJ_T0070211.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10676442 10882239 + MGP_BALBcJ_P0070211 Sema3a protein_coding protein_coding MGP_BALBcJ_T0070212.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10676457 10729094 + MGP_BALBcJ_P0070212 Sema3a protein_coding protein_coding MGP_BALBcJ_T0070213.1 MGP_BALBcJ_G0029275.1 mouse_genomes_project 5 10676710 10774605 + Sema3a protein_coding processed_transcript MGP_BALBcJ_T0101211.1 MGP_BALBcJ_G0039247.1 mouse_genomes_project 5 86017604 86017727 - Gm24314 snoRNA snoRNA MGP_BALBcJ_T0071538.1 MGP_BALBcJ_G0029504.1 mouse_genomes_project 5 41622353 41625308 - MGP_BALBcJ_P0071538 Fgfbp1 protein_coding protein_coding MGP_BALBcJ_T0071539.1 MGP_BALBcJ_G0029504.1 mouse_genomes_project 5 41622355 41625293 - MGP_BALBcJ_P0071539 Fgfbp1 protein_coding protein_coding MGP_BALBcJ_T0071540.1 MGP_BALBcJ_G0029504.1 mouse_genomes_project 5 41622358 41624550 - MGP_BALBcJ_P0071540 Fgfbp1 protein_coding protein_coding MGP_BALBcJ_T0001634.1 MGP_BALBcJ_G0001550.1 mouse_genomes_project 5 63532899 63535730 + TEC TEC MGP_BALBcJ_T0004869.1 MGP_BALBcJ_G0004186.1 mouse_genomes_project 5 149388819 149391121 - Gm15410 antisense antisense MGP_BALBcJ_T0015197.1 MGP_BALBcJ_G0013294.1 mouse_genomes_project 5 151003497 151005420 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015103.1 MGP_BALBcJ_G0013200.1 mouse_genomes_project 5 110372034 110372532 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001478.1 MGP_BALBcJ_G0001398.1 mouse_genomes_project 5 24756197 24758793 + TEC TEC MGP_BALBcJ_T0004633.1 MGP_BALBcJ_G0004013.1 mouse_genomes_project 5 22391347 22395253 + Prkag2os1 antisense antisense MGP_BALBcJ_T0075293.1 MGP_BALBcJ_G0030221.1 mouse_genomes_project 5 137741067 137741981 + MGP_BALBcJ_P0075293 Ppp1r35 protein_coding protein_coding MGP_BALBcJ_T0075294.1 MGP_BALBcJ_G0030221.1 mouse_genomes_project 5 137741122 137742329 + MGP_BALBcJ_P0075294 Ppp1r35 protein_coding protein_coding MGP_BALBcJ_T0075295.1 MGP_BALBcJ_G0030221.1 mouse_genomes_project 5 137741655 137742325 + MGP_BALBcJ_P0075295 Ppp1r35 protein_coding protein_coding MGP_BALBcJ_T0075296.1 MGP_BALBcJ_G0030221.1 mouse_genomes_project 5 137741762 137742329 + Ppp1r35 protein_coding retained_intron MGP_BALBcJ_T0075901.1 MGP_BALBcJ_G0030359.1 mouse_genomes_project 5 146948952 146950959 - Gpr12 protein_coding retained_intron MGP_BALBcJ_T0075902.1 MGP_BALBcJ_G0030359.1 mouse_genomes_project 5 146948954 146951795 - MGP_BALBcJ_P0075902 Gpr12 protein_coding protein_coding MGP_BALBcJ_T0075903.1 MGP_BALBcJ_G0030359.1 mouse_genomes_project 5 146949306 146951387 - MGP_BALBcJ_P0075903 Gpr12 protein_coding protein_coding MGP_BALBcJ_T0075904.1 MGP_BALBcJ_G0030359.1 mouse_genomes_project 5 146950025 146951374 - MGP_BALBcJ_P0075904 Gpr12 protein_coding protein_coding MGP_BALBcJ_T0075905.1 MGP_BALBcJ_G0030359.1 mouse_genomes_project 5 146950209 146951398 - MGP_BALBcJ_P0075905 Gpr12 protein_coding protein_coding MGP_BALBcJ_T0001543.1 MGP_BALBcJ_G0001461.1 mouse_genomes_project 5 43315123 43316130 - TEC TEC MGP_BALBcJ_T0098970.1 MGP_BALBcJ_G0037017.1 mouse_genomes_project 5 104528002 104529334 + C230066G23Rik sense_intronic sense_intronic MGP_BALBcJ_T0072384.1 MGP_BALBcJ_G0029644.1 mouse_genomes_project 5 84405310 84469938 - MGP_BALBcJ_P0072384 Tmprss11c protein_coding protein_coding MGP_BALBcJ_T0072385.1 MGP_BALBcJ_G0029644.1 mouse_genomes_project 5 84405581 84469890 - MGP_BALBcJ_P0072385 Tmprss11c protein_coding protein_coding MGP_BALBcJ_T0014938.1 MGP_BALBcJ_G0013035.1 mouse_genomes_project 5 42051145 42051782 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001442.1 MGP_BALBcJ_G0001363.1 mouse_genomes_project 5 7830416 7832545 - TEC TEC MGP_BALBcJ_T0014962.1 MGP_BALBcJ_G0013059.1 mouse_genomes_project 5 55236721 55237352 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008285.1 MGP_BALBcJ_G0006734.1 mouse_genomes_project 5 112149985 112155305 + Gm42865 lincRNA lincRNA MGP_BALBcJ_T0014894.1 MGP_BALBcJ_G0012991.1 mouse_genomes_project 5 24382965 24383100 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070998.1 MGP_BALBcJ_G0029415.1 mouse_genomes_project 5 30455850 30523424 - MGP_BALBcJ_P0070998 Prr14l protein_coding unknown_likely_coding MGP_BALBcJ_T0070999.1 MGP_BALBcJ_G0029415.1 mouse_genomes_project 5 30456454 30523393 - MGP_BALBcJ_P0070999 Prr14l protein_coding protein_coding MGP_BALBcJ_T0071000.1 MGP_BALBcJ_G0029415.1 mouse_genomes_project 5 30460911 30463465 - Prr14l protein_coding retained_intron MGP_BALBcJ_T0071001.1 MGP_BALBcJ_G0029415.1 mouse_genomes_project 5 30504066 30523373 - MGP_BALBcJ_P0071001 Prr14l protein_coding protein_coding MGP_BALBcJ_T0004854.1 MGP_BALBcJ_G0004177.1 mouse_genomes_project 5 140325159 140328494 + Gm16120 antisense antisense MGP_BALBcJ_T0004855.1 MGP_BALBcJ_G0004177.1 mouse_genomes_project 5 140327284 140328494 + Gm16120 antisense antisense MGP_BALBcJ_T0073405.1 MGP_BALBcJ_G0029888.1 mouse_genomes_project 5 112388714 112497614 - MGP_BALBcJ_P0073405 Adrbk2 protein_coding protein_coding MGP_BALBcJ_T0073406.1 MGP_BALBcJ_G0029888.1 mouse_genomes_project 5 112390831 112497614 - MGP_BALBcJ_P0073406 Adrbk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073407.1 MGP_BALBcJ_G0029888.1 mouse_genomes_project 5 112394336 112402691 - Adrbk2 protein_coding retained_intron MGP_BALBcJ_T0073408.1 MGP_BALBcJ_G0029888.1 mouse_genomes_project 5 112396057 112497891 - MGP_BALBcJ_P0073408 Adrbk2 protein_coding protein_coding MGP_BALBcJ_T0073409.1 MGP_BALBcJ_G0029888.1 mouse_genomes_project 5 112398374 112404083 - Adrbk2 protein_coding retained_intron MGP_BALBcJ_T0073410.1 MGP_BALBcJ_G0029888.1 mouse_genomes_project 5 112441496 112497603 - MGP_BALBcJ_P0073410 Adrbk2 protein_coding protein_coding MGP_BALBcJ_T0001685.1 MGP_BALBcJ_G0001600.1 mouse_genomes_project 5 71276033 71276552 - TEC TEC MGP_BALBcJ_T0015046.1 MGP_BALBcJ_G0013143.1 mouse_genomes_project 5 90097417 90098297 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001812.1 MGP_BALBcJ_G0001727.1 mouse_genomes_project 5 123183053 123185201 + TEC TEC MGP_BALBcJ_T0074969.1 MGP_BALBcJ_G0030163.1 mouse_genomes_project 5 135462256 135465369 - MGP_BALBcJ_P0074969 Ccl24 protein_coding protein_coding MGP_BALBcJ_T0074970.1 MGP_BALBcJ_G0030163.1 mouse_genomes_project 5 135462899 135465369 - MGP_BALBcJ_P0074970 Ccl24 protein_coding protein_coding MGP_BALBcJ_T0069945.1 MGP_BALBcJ_G0029236.1 mouse_genomes_project 5 189395 192364 + MGP_BALBcJ_P0069945 Cdk6 protein_coding protein_coding MGP_BALBcJ_T0069946.1 MGP_BALBcJ_G0029236.1 mouse_genomes_project 5 191642 192348 + MGP_BALBcJ_P0069946 Cdk6 protein_coding protein_coding MGP_BALBcJ_T0069948.1 MGP_BALBcJ_G0029236.1 mouse_genomes_project 5 192222 450738 + MGP_BALBcJ_P0069948 Cdk6 protein_coding protein_coding MGP_BALBcJ_T0069950.1 MGP_BALBcJ_G0029236.1 mouse_genomes_project 5 400334 402566 + Cdk6 protein_coding retained_intron MGP_BALBcJ_T0001484.1 MGP_BALBcJ_G0001404.1 mouse_genomes_project 5 28412222 28414287 - TEC TEC MGP_BALBcJ_T0014819.1 MGP_BALBcJ_G0012916.1 mouse_genomes_project 5 358354 358535 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071096.1 MGP_BALBcJ_G0029430.1 mouse_genomes_project 5 31424226 31467205 - MGP_BALBcJ_P0071096 Letm1 protein_coding protein_coding MGP_BALBcJ_T0071097.1 MGP_BALBcJ_G0029430.1 mouse_genomes_project 5 31427087 31438091 - Letm1 protein_coding retained_intron MGP_BALBcJ_T0071098.1 MGP_BALBcJ_G0029430.1 mouse_genomes_project 5 31446100 31463036 - MGP_BALBcJ_P0071098 Letm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071099.1 MGP_BALBcJ_G0029430.1 mouse_genomes_project 5 31453750 31467102 - Letm1 protein_coding processed_transcript MGP_BALBcJ_T0071100.1 MGP_BALBcJ_G0029430.1 mouse_genomes_project 5 31453949 31454842 - Letm1 protein_coding processed_transcript MGP_BALBcJ_T0071101.1 MGP_BALBcJ_G0029430.1 mouse_genomes_project 5 31460846 31467125 - MGP_BALBcJ_P0071101 Letm1 protein_coding protein_coding MGP_BALBcJ_T0101196.1 MGP_BALBcJ_G0039232.1 mouse_genomes_project 5 54902468 54902596 - Gm23015 snoRNA snoRNA MGP_BALBcJ_T0001623.1 MGP_BALBcJ_G0001539.1 mouse_genomes_project 5 62351832 62352786 + TEC TEC MGP_BALBcJ_T0074644.1 MGP_BALBcJ_G0030107.1 mouse_genomes_project 5 129566081 129599873 + MGP_BALBcJ_P0074644 Gbas protein_coding protein_coding MGP_BALBcJ_T0074645.1 MGP_BALBcJ_G0030107.1 mouse_genomes_project 5 129566117 129599796 + MGP_BALBcJ_P0074645 Gbas protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074646.1 MGP_BALBcJ_G0030107.1 mouse_genomes_project 5 129566119 129598923 + MGP_BALBcJ_P0074646 Gbas protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074647.1 MGP_BALBcJ_G0030107.1 mouse_genomes_project 5 129594230 129598752 + Gbas protein_coding retained_intron MGP_BALBcJ_T0074648.1 MGP_BALBcJ_G0030107.1 mouse_genomes_project 5 129594802 129596407 + Gbas protein_coding processed_transcript MGP_BALBcJ_T0102562.1 MGP_BALBcJ_G0040378.1 mouse_genomes_project 5 47871855 48029163 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001702.1 MGP_BALBcJ_G0001617.1 mouse_genomes_project 5 79376307 79379752 + TEC TEC MGP_BALBcJ_T0098955.1 MGP_BALBcJ_G0037002.1 mouse_genomes_project 5 1859808 1861727 - Gm43111 sense_intronic sense_intronic MGP_BALBcJ_T0072986.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104653543 104767289 + MGP_BALBcJ_P0072986 Lrrc8d protein_coding protein_coding MGP_BALBcJ_T0072987.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104654362 104767284 + MGP_BALBcJ_P0072987 Lrrc8d protein_coding protein_coding MGP_BALBcJ_T0072988.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104654383 104683167 + Lrrc8d protein_coding retained_intron MGP_BALBcJ_T0072989.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104654439 104683165 + Lrrc8d protein_coding processed_transcript MGP_BALBcJ_T0072990.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104680317 104763912 + MGP_BALBcJ_P0072990 Lrrc8d protein_coding protein_coding MGP_BALBcJ_T0072991.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104680714 104763923 + MGP_BALBcJ_P0072991 Lrrc8d protein_coding protein_coding MGP_BALBcJ_T0072992.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104680920 104765714 + Lrrc8d protein_coding processed_transcript MGP_BALBcJ_T0072993.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104680993 104764079 + MGP_BALBcJ_P0072993 Lrrc8d protein_coding protein_coding MGP_BALBcJ_T0072994.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104681160 104787662 + Lrrc8d protein_coding processed_transcript MGP_BALBcJ_T0072995.1 MGP_BALBcJ_G0029803.1 mouse_genomes_project 5 104776586 104787661 + Lrrc8d protein_coding processed_transcript MGP_BALBcJ_T0004790.1 MGP_BALBcJ_G0004129.1 mouse_genomes_project 5 120140326 120141388 - Gm15690 antisense antisense MGP_BALBcJ_T0075568.1 MGP_BALBcJ_G0030286.1 mouse_genomes_project 5 140629542 140650930 + MGP_BALBcJ_P0075568 Chst12 protein_coding protein_coding MGP_BALBcJ_T0075569.1 MGP_BALBcJ_G0030286.1 mouse_genomes_project 5 140629567 140649676 + MGP_BALBcJ_P0075569 Chst12 protein_coding protein_coding MGP_BALBcJ_T0004813.1 MGP_BALBcJ_G0004146.1 mouse_genomes_project 5 124044277 124044989 + Gm42425 antisense antisense MGP_BALBcJ_T0001826.1 MGP_BALBcJ_G0001740.1 mouse_genomes_project 5 126797433 126800820 + TEC TEC MGP_BALBcJ_T0074250.1 MGP_BALBcJ_G0030040.1 mouse_genomes_project 5 122870289 122900294 - MGP_BALBcJ_P0074250 Rhof protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074251.1 MGP_BALBcJ_G0030040.1 mouse_genomes_project 5 122870289 122900229 - MGP_BALBcJ_P0074251 Rhof protein_coding protein_coding MGP_BALBcJ_T0074252.1 MGP_BALBcJ_G0030040.1 mouse_genomes_project 5 122879180 122900262 - Rhof protein_coding processed_transcript MGP_BALBcJ_T0074253.1 MGP_BALBcJ_G0030040.1 mouse_genomes_project 5 122886200 122900525 - MGP_BALBcJ_P0074253 Rhof protein_coding protein_coding MGP_BALBcJ_T0072098.1 MGP_BALBcJ_G0029596.1 mouse_genomes_project 5 70962121 70972623 + MGP_BALBcJ_P0072098 Slc10a4 protein_coding protein_coding MGP_BALBcJ_T0070433.1 MGP_BALBcJ_G0029318.1 mouse_genomes_project 5 21899287 21903730 + MGP_BALBcJ_P0070433 Asic3 protein_coding protein_coding MGP_BALBcJ_T0070434.1 MGP_BALBcJ_G0029318.1 mouse_genomes_project 5 21899346 21903730 + Asic3 protein_coding retained_intron MGP_BALBcJ_T0070435.1 MGP_BALBcJ_G0029318.1 mouse_genomes_project 5 21899607 21903642 + MGP_BALBcJ_P0070435 Asic3 protein_coding protein_coding MGP_BALBcJ_T0070436.1 MGP_BALBcJ_G0029318.1 mouse_genomes_project 5 21901635 21903730 + Asic3 protein_coding retained_intron MGP_BALBcJ_T0070437.1 MGP_BALBcJ_G0029318.1 mouse_genomes_project 5 21902472 21903731 + MGP_BALBcJ_P0070437 Asic3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071331.1 MGP_BALBcJ_G0029464.1 mouse_genomes_project 5 33906782 33909329 + MGP_BALBcJ_P0071331 Psapl1 protein_coding protein_coding MGP_BALBcJ_T0008199.1 MGP_BALBcJ_G0006681.1 mouse_genomes_project 5 98198581 98201230 + Gm43253 lincRNA lincRNA MGP_BALBcJ_T0101219.1 MGP_BALBcJ_G0039255.1 mouse_genomes_project 5 99557424 99557558 + Gm26286 snoRNA snoRNA MGP_BALBcJ_T0098613.1 MGP_BALBcJ_G0036667.1 mouse_genomes_project 5 73992580 73992703 - Gm24738 rRNA rRNA MGP_BALBcJ_T0008396.1 MGP_BALBcJ_G0006806.1 mouse_genomes_project 5 137195544 137210254 - Gm42456 lincRNA lincRNA MGP_BALBcJ_T0074947.1 MGP_BALBcJ_G0030158.1 mouse_genomes_project 5 135242018 135257688 + MGP_BALBcJ_P0074947 Trim50 protein_coding unknown_likely_coding MGP_BALBcJ_T0074948.1 MGP_BALBcJ_G0030158.1 mouse_genomes_project 5 135243492 135258039 + MGP_BALBcJ_P0074948 Trim50 protein_coding protein_coding MGP_BALBcJ_T0001476.1 MGP_BALBcJ_G0001396.1 mouse_genomes_project 5 23185717 23187740 - TEC TEC MGP_BALBcJ_T0015198.1 MGP_BALBcJ_G0013295.1 mouse_genomes_project 5 151513626 151515482 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015109.1 MGP_BALBcJ_G0013206.1 mouse_genomes_project 5 114346326 114346946 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004772.1 MGP_BALBcJ_G0004119.1 mouse_genomes_project 5 115716526 115722033 + C330018A13Rik antisense antisense MGP_BALBcJ_T0071610.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645892 45989537 + MGP_BALBcJ_P0071610 Slit2 protein_coding protein_coding MGP_BALBcJ_T0071611.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645908 45653079 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071612.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645908 45855266 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071613.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645908 45987314 + MGP_BALBcJ_P0071613 Slit2 protein_coding protein_coding MGP_BALBcJ_T0071614.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645908 45987314 + MGP_BALBcJ_P0071614 Slit2 protein_coding protein_coding MGP_BALBcJ_T0071615.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645908 45986199 + MGP_BALBcJ_P0071615 Slit2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071616.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645908 45987314 + MGP_BALBcJ_P0071616 Slit2 protein_coding protein_coding MGP_BALBcJ_T0071617.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645912 45751666 + Slit2 protein_coding processed_transcript MGP_BALBcJ_T0071618.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45645931 45648423 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071619.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45647748 45845272 + Slit2 protein_coding processed_transcript MGP_BALBcJ_T0071620.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45650588 45863643 + MGP_BALBcJ_P0071620 Slit2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071621.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45841268 45864850 + Slit2 protein_coding processed_transcript MGP_BALBcJ_T0071622.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45846347 45851143 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071623.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45854209 45895591 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071624.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45862103 45907338 + Slit2 protein_coding processed_transcript MGP_BALBcJ_T0071625.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45899331 45915670 + Slit2 protein_coding processed_transcript MGP_BALBcJ_T0071626.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45908702 45964750 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071627.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45915718 45941360 + MGP_BALBcJ_P0071627 Slit2 protein_coding protein_coding MGP_BALBcJ_T0071628.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45926442 45929305 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071629.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45929869 45944445 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071630.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45938366 45941314 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071631.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45957053 45963602 + Slit2 protein_coding retained_intron MGP_BALBcJ_T0071632.1 MGP_BALBcJ_G0029515.1 mouse_genomes_project 5 45963580 45984315 + MGP_BALBcJ_P0071632 Slit2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070275.1 MGP_BALBcJ_G0029289.1 mouse_genomes_project 5 18262110 18321457 - MGP_BALBcJ_P0070275 Rsbn1l protein_coding protein_coding MGP_BALBcJ_T0070276.1 MGP_BALBcJ_G0029289.1 mouse_genomes_project 5 18264673 18326026 - MGP_BALBcJ_P0070276 Rsbn1l protein_coding protein_coding MGP_BALBcJ_T0070277.1 MGP_BALBcJ_G0029289.1 mouse_genomes_project 5 18289200 18291489 - Rsbn1l protein_coding retained_intron MGP_BALBcJ_T0070278.1 MGP_BALBcJ_G0029289.1 mouse_genomes_project 5 18289231 18314656 - MGP_BALBcJ_P0070278 Rsbn1l protein_coding protein_coding MGP_BALBcJ_T0070161.1 MGP_BALBcJ_G0029268.1 mouse_genomes_project 5 5913629 5979467 + MGP_BALBcJ_P0070161 Abcb4 protein_coding protein_coding MGP_BALBcJ_T0070162.1 MGP_BALBcJ_G0029268.1 mouse_genomes_project 5 5913633 5921173 + Abcb4 protein_coding retained_intron MGP_BALBcJ_T0070163.1 MGP_BALBcJ_G0029268.1 mouse_genomes_project 5 5913861 5962062 + MGP_BALBcJ_P0070163 Abcb4 protein_coding protein_coding MGP_BALBcJ_T0070164.1 MGP_BALBcJ_G0029268.1 mouse_genomes_project 5 5949659 5953020 + Abcb4 protein_coding retained_intron MGP_BALBcJ_T0070165.1 MGP_BALBcJ_G0029268.1 mouse_genomes_project 5 5978792 5979472 + Abcb4 protein_coding retained_intron MGP_BALBcJ_T0070147.1 MGP_BALBcJ_G0029266.1 mouse_genomes_project 5 5665288 5755636 + MGP_BALBcJ_P0070147 Abcb1a protein_coding protein_coding MGP_BALBcJ_T0070148.1 MGP_BALBcJ_G0029266.1 mouse_genomes_project 5 5724637 5755686 + Abcb1a protein_coding retained_intron MGP_BALBcJ_T0070149.1 MGP_BALBcJ_G0029266.1 mouse_genomes_project 5 5724667 5727993 + Abcb1a protein_coding processed_transcript MGP_BALBcJ_T0070150.1 MGP_BALBcJ_G0029266.1 mouse_genomes_project 5 5741884 5746746 + Abcb1a protein_coding retained_intron MGP_BALBcJ_T0015045.1 MGP_BALBcJ_G0013142.1 mouse_genomes_project 5 89114876 89115190 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001746.1 MGP_BALBcJ_G0001661.1 mouse_genomes_project 5 106850854 106852019 + TEC TEC MGP_BALBcJ_T0072826.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99163173 99226194 - MGP_BALBcJ_P0072826 Lin54 protein_coding protein_coding MGP_BALBcJ_T0072827.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99163183 99224295 - MGP_BALBcJ_P0072827 Lin54 protein_coding protein_coding MGP_BALBcJ_T0072828.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99163288 99224337 - MGP_BALBcJ_P0072828 Lin54 protein_coding protein_coding MGP_BALBcJ_T0072829.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99163288 99226230 - MGP_BALBcJ_P0072829 Lin54 protein_coding protein_coding MGP_BALBcJ_T0072830.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99163297 99224282 - MGP_BALBcJ_P0072830 Lin54 protein_coding protein_coding MGP_BALBcJ_T0072831.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99163455 99226243 - MGP_BALBcJ_P0072831 Lin54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072832.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99164807 99224227 - MGP_BALBcJ_P0072832 Lin54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072833.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99164807 99224227 - MGP_BALBcJ_P0072833 Lin54 protein_coding protein_coding MGP_BALBcJ_T0072834.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99182753 99211329 - MGP_BALBcJ_P0072834 Lin54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072835.1 MGP_BALBcJ_G0029762.1 mouse_genomes_project 5 99210246 99224282 - Lin54 protein_coding retained_intron MGP_BALBcJ_T0072309.1 MGP_BALBcJ_G0029633.1 mouse_genomes_project 5 75275746 75296664 + MGP_BALBcJ_P0072309 Rest protein_coding protein_coding MGP_BALBcJ_T0072310.1 MGP_BALBcJ_G0029633.1 mouse_genomes_project 5 75276451 75296664 + MGP_BALBcJ_P0072310 Rest protein_coding protein_coding MGP_BALBcJ_T0004726.1 MGP_BALBcJ_G0004086.1 mouse_genomes_project 5 98375852 98383845 + Gm16226 antisense antisense MGP_BALBcJ_T0004727.1 MGP_BALBcJ_G0004086.1 mouse_genomes_project 5 98375852 98409938 + Gm16226 antisense antisense MGP_BALBcJ_T0004728.1 MGP_BALBcJ_G0004086.1 mouse_genomes_project 5 98375857 98409940 + Gm16226 antisense antisense MGP_BALBcJ_T0004729.1 MGP_BALBcJ_G0004086.1 mouse_genomes_project 5 98375881 98409936 + Gm16226 antisense antisense MGP_BALBcJ_T0075775.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144348898 144384271 - MGP_BALBcJ_P0075775 Tecpr1 protein_coding protein_coding MGP_BALBcJ_T0075776.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144349813 144384203 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075777.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144350589 144352658 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075778.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144350594 144353474 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075779.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144353046 144354249 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075780.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144354950 144358046 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075781.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144361948 144363105 - Tecpr1 protein_coding processed_transcript MGP_BALBcJ_T0075782.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144363979 144376268 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075783.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144363996 144384208 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075784.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144366709 144384262 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075785.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144378973 144384214 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0075786.1 MGP_BALBcJ_G0030333.1 mouse_genomes_project 5 144381043 144384179 - Tecpr1 protein_coding retained_intron MGP_BALBcJ_T0072770.1 MGP_BALBcJ_G0029751.1 mouse_genomes_project 5 97224752 97225802 + MGP_BALBcJ_P0072770 Gm11111 protein_coding protein_coding MGP_BALBcJ_T0004856.1 MGP_BALBcJ_G0004178.1 mouse_genomes_project 5 141514097 141521845 - Gm16035 antisense antisense MGP_BALBcJ_T0072300.1 MGP_BALBcJ_G0029630.1 mouse_genomes_project 5 75015414 75059437 + MGP_BALBcJ_P0072300 Thegl protein_coding protein_coding MGP_BALBcJ_T0072301.1 MGP_BALBcJ_G0029630.1 mouse_genomes_project 5 75015414 75059444 + MGP_BALBcJ_P0072301 Thegl protein_coding protein_coding MGP_BALBcJ_T0072302.1 MGP_BALBcJ_G0029630.1 mouse_genomes_project 5 75034804 75045246 + MGP_BALBcJ_P0072302 Thegl protein_coding protein_coding MGP_BALBcJ_T0073579.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114233898 114284929 - MGP_BALBcJ_P0073579 Git2 protein_coding protein_coding MGP_BALBcJ_T0073580.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114233899 114284926 - MGP_BALBcJ_P0073580 Git2 protein_coding protein_coding MGP_BALBcJ_T0073581.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114233902 114284868 - MGP_BALBcJ_P0073581 Git2 protein_coding protein_coding MGP_BALBcJ_T0073582.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114233902 114284926 - MGP_BALBcJ_P0073582 Git2 protein_coding protein_coding MGP_BALBcJ_T0073583.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114233902 114255282 - MGP_BALBcJ_P0073583 Git2 protein_coding protein_coding MGP_BALBcJ_T0073584.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114236067 114284896 - MGP_BALBcJ_P0073584 Git2 protein_coding protein_coding MGP_BALBcJ_T0073585.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114236362 114284929 - MGP_BALBcJ_P0073585 Git2 protein_coding protein_coding MGP_BALBcJ_T0073586.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114239708 114240659 - Git2 protein_coding processed_transcript MGP_BALBcJ_T0073587.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114240356 114259693 - MGP_BALBcJ_P0073587 Git2 protein_coding protein_coding MGP_BALBcJ_T0073588.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114245763 114252776 - Git2 protein_coding retained_intron MGP_BALBcJ_T0073589.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114258742 114284929 - Git2 protein_coding retained_intron MGP_BALBcJ_T0073590.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114259630 114277926 - MGP_BALBcJ_P0073590 Git2 protein_coding protein_coding MGP_BALBcJ_T0073591.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114265650 114273088 - Git2 protein_coding retained_intron MGP_BALBcJ_T0073592.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114275753 114287092 - MGP_BALBcJ_P0073592 Git2 protein_coding protein_coding MGP_BALBcJ_T0073593.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114275857 114284929 - Git2 protein_coding processed_transcript MGP_BALBcJ_T0073594.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114275944 114278557 - Git2 protein_coding processed_transcript MGP_BALBcJ_T0073595.1 MGP_BALBcJ_G0029920.1 mouse_genomes_project 5 114277077 114284901 - Git2 protein_coding retained_intron MGP_BALBcJ_T0075574.1 MGP_BALBcJ_G0030289.1 mouse_genomes_project 5 140750082 140778629 - MGP_BALBcJ_P0075574 Ttyh3 protein_coding protein_coding MGP_BALBcJ_T0075575.1 MGP_BALBcJ_G0030289.1 mouse_genomes_project 5 140752595 140756799 - MGP_BALBcJ_P0075575 Ttyh3 protein_coding protein_coding MGP_BALBcJ_T0075576.1 MGP_BALBcJ_G0030289.1 mouse_genomes_project 5 140760648 140761120 - Ttyh3 protein_coding retained_intron MGP_BALBcJ_T0075577.1 MGP_BALBcJ_G0030289.1 mouse_genomes_project 5 140761029 140766270 - Ttyh3 protein_coding retained_intron MGP_BALBcJ_T0075578.1 MGP_BALBcJ_G0030289.1 mouse_genomes_project 5 140778272 140778799 - Ttyh3 protein_coding processed_transcript MGP_BALBcJ_T0001867.1 MGP_BALBcJ_G0001781.1 mouse_genomes_project 5 132614274 132614562 + TEC TEC MGP_BALBcJ_T0073902.1 MGP_BALBcJ_G0029981.1 mouse_genomes_project 5 120194700 120251794 - MGP_BALBcJ_P0073902 Tpcn1 protein_coding protein_coding MGP_BALBcJ_T0073903.1 MGP_BALBcJ_G0029981.1 mouse_genomes_project 5 120208795 120251733 - Tpcn1 protein_coding retained_intron MGP_BALBcJ_T0073904.1 MGP_BALBcJ_G0029981.1 mouse_genomes_project 5 120245561 120251715 - Tpcn1 protein_coding retained_intron MGP_BALBcJ_T0073905.1 MGP_BALBcJ_G0029981.1 mouse_genomes_project 5 120250277 120251720 - Tpcn1 protein_coding retained_intron MGP_BALBcJ_T0075326.1 MGP_BALBcJ_G0030230.1 mouse_genomes_project 5 137995315 138038570 + MGP_BALBcJ_P0075326 protein_coding protein_coding MGP_BALBcJ_T0014821.1 MGP_BALBcJ_G0012918.1 mouse_genomes_project 5 913426 915138 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001606.1 MGP_BALBcJ_G0001523.1 mouse_genomes_project 5 55694678 55697400 + TEC TEC MGP_BALBcJ_T0011579.1 MGP_BALBcJ_G0009704.1 mouse_genomes_project 5 99147998 99148067 + Gm27997 misc_RNA misc_RNA MGP_BALBcJ_T0008116.1 MGP_BALBcJ_G0006614.1 mouse_genomes_project 5 52045935 52054525 + Gm10440 lincRNA lincRNA MGP_BALBcJ_T0001449.1 MGP_BALBcJ_G0001370.1 mouse_genomes_project 5 10825725 10829760 + TEC TEC MGP_BALBcJ_T0008294.1 MGP_BALBcJ_G0006739.1 mouse_genomes_project 5 114910707 114916423 + Gm42903 lincRNA lincRNA MGP_BALBcJ_T0070607.1 MGP_BALBcJ_G0029354.1 mouse_genomes_project 5 27119176 27227402 + MGP_BALBcJ_P0070607 Ube3c protein_coding protein_coding MGP_BALBcJ_T0070608.1 MGP_BALBcJ_G0029354.1 mouse_genomes_project 5 27119380 27183864 + MGP_BALBcJ_P0070608 Ube3c protein_coding protein_coding MGP_BALBcJ_T0070609.1 MGP_BALBcJ_G0029354.1 mouse_genomes_project 5 27119420 27150766 + Ube3c protein_coding retained_intron MGP_BALBcJ_T0070610.1 MGP_BALBcJ_G0029354.1 mouse_genomes_project 5 27141053 27151303 + Ube3c protein_coding processed_transcript MGP_BALBcJ_T0070611.1 MGP_BALBcJ_G0029354.1 mouse_genomes_project 5 27182292 27183864 + Ube3c protein_coding retained_intron MGP_BALBcJ_T0001652.1 MGP_BALBcJ_G0001568.1 mouse_genomes_project 5 64466097 64468040 - TEC TEC MGP_BALBcJ_T0098951.1 MGP_BALBcJ_G0036998.1 mouse_genomes_project 5 472383 473135 + Gm43017 sense_intronic sense_intronic MGP_BALBcJ_T0072623.1 MGP_BALBcJ_G0029720.1 mouse_genomes_project 5 90558049 90563562 - MGP_BALBcJ_P0072623 U90926 protein_coding protein_coding MGP_BALBcJ_T0072624.1 MGP_BALBcJ_G0029720.1 mouse_genomes_project 5 90558052 90563562 - MGP_BALBcJ_P0072624 U90926 protein_coding protein_coding MGP_BALBcJ_T0072625.1 MGP_BALBcJ_G0029720.1 mouse_genomes_project 5 90558270 90560507 - U90926 protein_coding retained_intron MGP_BALBcJ_T0070898.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28838396 28842091 - MGP_BALBcJ_P0070898 Fndc4 protein_coding protein_coding MGP_BALBcJ_T0070899.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28839040 28842026 - MGP_BALBcJ_P0070899 Fndc4 protein_coding protein_coding MGP_BALBcJ_T0070900.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28839040 28839868 - MGP_BALBcJ_P0070900 Fndc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070901.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28839426 28840121 - Fndc4 protein_coding retained_intron MGP_BALBcJ_T0070902.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28839840 28841588 - MGP_BALBcJ_P0070902 Fndc4 protein_coding protein_coding MGP_BALBcJ_T0070903.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28840240 28841414 - Fndc4 protein_coding retained_intron MGP_BALBcJ_T0070904.1 MGP_BALBcJ_G0029400.1 mouse_genomes_project 5 28840869 28842235 - MGP_BALBcJ_P0070904 Fndc4 protein_coding protein_coding MGP_BALBcJ_T0010700.1 MGP_BALBcJ_G0008825.1 mouse_genomes_project 5 134167012 134167081 + Mir3965 miRNA miRNA MGP_BALBcJ_T0001605.1 MGP_BALBcJ_G0001522.1 mouse_genomes_project 5 55589040 55590987 + TEC TEC MGP_BALBcJ_T0098966.1 MGP_BALBcJ_G0037013.1 mouse_genomes_project 5 71177428 71179916 - Gm17207 sense_intronic sense_intronic MGP_BALBcJ_T0008375.1 MGP_BALBcJ_G0006794.1 mouse_genomes_project 5 128379794 128402500 - 5930412G12Rik lincRNA lincRNA MGP_BALBcJ_T0008376.1 MGP_BALBcJ_G0006794.1 mouse_genomes_project 5 128379794 128386445 - 5930412G12Rik lincRNA lincRNA MGP_BALBcJ_T0008377.1 MGP_BALBcJ_G0006794.1 mouse_genomes_project 5 128379816 128402500 - 5930412G12Rik lincRNA lincRNA MGP_BALBcJ_T0008378.1 MGP_BALBcJ_G0006794.1 mouse_genomes_project 5 128379866 128386445 - 5930412G12Rik lincRNA lincRNA MGP_BALBcJ_T0008379.1 MGP_BALBcJ_G0006794.1 mouse_genomes_project 5 128384130 128402506 - 5930412G12Rik lincRNA lincRNA MGP_BALBcJ_T0008380.1 MGP_BALBcJ_G0006794.1 mouse_genomes_project 5 128385241 128402467 - 5930412G12Rik lincRNA lincRNA MGP_BALBcJ_T0015141.1 MGP_BALBcJ_G0013238.1 mouse_genomes_project 5 136128689 136129464 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004715.1 MGP_BALBcJ_G0004079.1 mouse_genomes_project 5 88856333 88873126 - Gm43449 antisense antisense MGP_BALBcJ_T0008318.1 MGP_BALBcJ_G0006759.1 mouse_genomes_project 5 119265336 119273808 + Gm16063 lincRNA lincRNA MGP_BALBcJ_T0071068.1 MGP_BALBcJ_G0029427.1 mouse_genomes_project 5 31336088 31340692 - MGP_BALBcJ_P0071068 Tmem129 protein_coding protein_coding MGP_BALBcJ_T0071069.1 MGP_BALBcJ_G0029427.1 mouse_genomes_project 5 31336095 31340764 - Tmem129 protein_coding retained_intron MGP_BALBcJ_T0071070.1 MGP_BALBcJ_G0029427.1 mouse_genomes_project 5 31338422 31340721 - Tmem129 protein_coding retained_intron MGP_BALBcJ_T0070241.1 MGP_BALBcJ_G0029282.1 mouse_genomes_project 5 14933132 15086126 + MGP_BALBcJ_P0070241 Sema3c protein_coding protein_coding MGP_BALBcJ_T0070242.1 MGP_BALBcJ_G0029282.1 mouse_genomes_project 5 14933500 15040224 + MGP_BALBcJ_P0070242 Sema3c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070243.1 MGP_BALBcJ_G0029282.1 mouse_genomes_project 5 14933617 14937031 + Sema3c protein_coding retained_intron MGP_BALBcJ_T0070244.1 MGP_BALBcJ_G0029282.1 mouse_genomes_project 5 14933750 15031129 + MGP_BALBcJ_P0070244 Sema3c protein_coding protein_coding MGP_BALBcJ_T0070245.1 MGP_BALBcJ_G0029282.1 mouse_genomes_project 5 15049701 15086123 + Sema3c protein_coding retained_intron MGP_BALBcJ_T0001452.1 MGP_BALBcJ_G0001373.1 mouse_genomes_project 5 11373470 11375345 + TEC TEC MGP_BALBcJ_T0014856.1 MGP_BALBcJ_G0012953.1 mouse_genomes_project 5 17957235 17957540 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014831.1 MGP_BALBcJ_G0012928.1 mouse_genomes_project 5 5076007 5076422 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001838.1 MGP_BALBcJ_G0001752.1 mouse_genomes_project 5 129938386 129938884 + TEC TEC MGP_BALBcJ_T0074857.1 MGP_BALBcJ_G0030139.1 mouse_genomes_project 5 134491155 134512487 - MGP_BALBcJ_P0074857 Eif4h protein_coding protein_coding MGP_BALBcJ_T0074858.1 MGP_BALBcJ_G0030139.1 mouse_genomes_project 5 134491311 134512344 - MGP_BALBcJ_P0074858 Eif4h protein_coding protein_coding MGP_BALBcJ_T0074859.1 MGP_BALBcJ_G0030139.1 mouse_genomes_project 5 134495313 134512322 - Eif4h protein_coding retained_intron MGP_BALBcJ_T0074860.1 MGP_BALBcJ_G0030139.1 mouse_genomes_project 5 134496316 134512299 - Eif4h protein_coding retained_intron MGP_BALBcJ_T0074861.1 MGP_BALBcJ_G0030139.1 mouse_genomes_project 5 134510458 134512307 - Eif4h protein_coding retained_intron MGP_BALBcJ_T0001551.1 MGP_BALBcJ_G0001469.1 mouse_genomes_project 5 45794180 45795793 + TEC TEC MGP_BALBcJ_T0001699.1 MGP_BALBcJ_G0001614.1 mouse_genomes_project 5 73826159 73828281 + TEC TEC MGP_BALBcJ_T0015193.1 MGP_BALBcJ_G0013290.1 mouse_genomes_project 5 150136771 150137230 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008065.1 MGP_BALBcJ_G0006577.1 mouse_genomes_project 5 31112228 31113068 - Gm43851 lincRNA lincRNA MGP_BALBcJ_T0008051.1 MGP_BALBcJ_G0006567.1 mouse_genomes_project 5 25591402 25645802 - Gm26608 lincRNA lincRNA MGP_BALBcJ_T0008052.1 MGP_BALBcJ_G0006567.1 mouse_genomes_project 5 25630879 25632387 - Gm26608 lincRNA lincRNA MGP_BALBcJ_T0014982.1 MGP_BALBcJ_G0013079.1 mouse_genomes_project 5 62069415 62070367 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0073888.1 MGP_BALBcJ_G0029978.1 mouse_genomes_project 5 120137036 120144416 + MGP_BALBcJ_P0073888 Sds protein_coding protein_coding MGP_BALBcJ_T0073889.1 MGP_BALBcJ_G0029978.1 mouse_genomes_project 5 120137041 120144416 + MGP_BALBcJ_P0073889 Sds protein_coding protein_coding MGP_BALBcJ_T0073890.1 MGP_BALBcJ_G0029978.1 mouse_genomes_project 5 120139370 120141172 + MGP_BALBcJ_P0073890 Sds protein_coding protein_coding MGP_BALBcJ_T0073891.1 MGP_BALBcJ_G0029978.1 mouse_genomes_project 5 120140847 120141373 + Sds protein_coding retained_intron MGP_BALBcJ_T0071166.1 MGP_BALBcJ_G0029441.1 mouse_genomes_project 5 32062861 32180033 + MGP_BALBcJ_P0071166 Fam193a protein_coding protein_coding MGP_BALBcJ_T0071167.1 MGP_BALBcJ_G0029441.1 mouse_genomes_project 5 32104405 32179324 + MGP_BALBcJ_P0071167 Fam193a protein_coding unknown_likely_coding MGP_BALBcJ_T0071168.1 MGP_BALBcJ_G0029441.1 mouse_genomes_project 5 32120249 32179324 + MGP_BALBcJ_P0071168 Fam193a protein_coding protein_coding MGP_BALBcJ_T0071169.1 MGP_BALBcJ_G0029441.1 mouse_genomes_project 5 32125129 32137535 + MGP_BALBcJ_P0071169 Fam193a protein_coding protein_coding MGP_BALBcJ_T0071170.1 MGP_BALBcJ_G0029441.1 mouse_genomes_project 5 32137628 32152549 + MGP_BALBcJ_P0071170 Fam193a protein_coding protein_coding MGP_BALBcJ_T0071171.1 MGP_BALBcJ_G0029441.1 mouse_genomes_project 5 32159645 32171255 + MGP_BALBcJ_P0071171 Fam193a protein_coding protein_coding MGP_BALBcJ_T0010721.1 MGP_BALBcJ_G0008846.1 mouse_genomes_project 5 143339382 143339508 + Gm44405 miRNA miRNA MGP_BALBcJ_T0073701.1 MGP_BALBcJ_G0029946.1 mouse_genomes_project 5 115043946 115050145 - MGP_BALBcJ_P0073701 Sirt4 protein_coding protein_coding MGP_BALBcJ_T0073702.1 MGP_BALBcJ_G0029946.1 mouse_genomes_project 5 115043946 115050571 - MGP_BALBcJ_P0073702 Sirt4 protein_coding protein_coding MGP_BALBcJ_T0073703.1 MGP_BALBcJ_G0029946.1 mouse_genomes_project 5 115043949 115045594 - Sirt4 protein_coding retained_intron MGP_BALBcJ_T0073704.1 MGP_BALBcJ_G0029946.1 mouse_genomes_project 5 115045807 115048697 - Sirt4 protein_coding retained_intron MGP_BALBcJ_T0073705.1 MGP_BALBcJ_G0029946.1 mouse_genomes_project 5 115045878 115050193 - Sirt4 protein_coding processed_transcript MGP_BALBcJ_T0073706.1 MGP_BALBcJ_G0029946.1 mouse_genomes_project 5 115048302 115050214 - Sirt4 protein_coding retained_intron MGP_BALBcJ_T0008232.1 MGP_BALBcJ_G0006703.1 mouse_genomes_project 5 105316884 105319412 - 4930432H08Rik lincRNA lincRNA MGP_BALBcJ_T0001519.1 MGP_BALBcJ_G0001437.1 mouse_genomes_project 5 40896176 40897749 + TEC TEC MGP_BALBcJ_T0072626.1 MGP_BALBcJ_G0029721.1 mouse_genomes_project 5 90575023 90604696 - MGP_BALBcJ_P0072626 Ppef2 protein_coding protein_coding MGP_BALBcJ_T0072627.1 MGP_BALBcJ_G0029721.1 mouse_genomes_project 5 90575033 90577390 - Ppef2 protein_coding processed_transcript MGP_BALBcJ_T0072628.1 MGP_BALBcJ_G0029721.1 mouse_genomes_project 5 90575318 90601583 - MGP_BALBcJ_P0072628 Ppef2 protein_coding protein_coding MGP_BALBcJ_T0008020.1 MGP_BALBcJ_G0006547.1 mouse_genomes_project 5 11034336 11117236 - Gm43716 lincRNA lincRNA MGP_BALBcJ_T0015091.1 MGP_BALBcJ_G0013188.1 mouse_genomes_project 5 108053618 108056717 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071506.1 MGP_BALBcJ_G0029497.1 mouse_genomes_project 5 39717976 39875453 + MGP_BALBcJ_P0071506 Gm16223 protein_coding protein_coding MGP_BALBcJ_T0101707.1 MGP_BALBcJ_G0039686.1 mouse_genomes_project 5 22136838 22140246 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101708.1 MGP_BALBcJ_G0039686.1 mouse_genomes_project 5 22139069 22140120 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0075438.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139063190 139082302 - MGP_BALBcJ_P0075438 Pdgfa protein_coding protein_coding MGP_BALBcJ_T0075439.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139063692 139082218 - MGP_BALBcJ_P0075439 Pdgfa protein_coding protein_coding MGP_BALBcJ_T0075440.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139064118 139083436 - MGP_BALBcJ_P0075440 Pdgfa protein_coding protein_coding MGP_BALBcJ_T0075441.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139064147 139084719 - MGP_BALBcJ_P0075441 Pdgfa protein_coding protein_coding MGP_BALBcJ_T0075442.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139064321 139081546 - Pdgfa protein_coding processed_transcript MGP_BALBcJ_T0075443.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139073532 139081749 - Pdgfa protein_coding processed_transcript MGP_BALBcJ_T0075444.1 MGP_BALBcJ_G0030260.1 mouse_genomes_project 5 139075703 139083350 - Pdgfa protein_coding processed_transcript MGP_BALBcJ_T0073429.1 MGP_BALBcJ_G0029892.1 mouse_genomes_project 5 112713157 112725475 + MGP_BALBcJ_P0073429 Tmem211 protein_coding protein_coding MGP_BALBcJ_T0074958.1 MGP_BALBcJ_G0030160.1 mouse_genomes_project 5 135266167 135284701 - MGP_BALBcJ_P0074958 Pom121 protein_coding protein_coding MGP_BALBcJ_T0075510.1 MGP_BALBcJ_G0030271.1 mouse_genomes_project 5 139527203 139531853 + MGP_BALBcJ_P0075510 Gper1 protein_coding protein_coding MGP_BALBcJ_T0075511.1 MGP_BALBcJ_G0030271.1 mouse_genomes_project 5 139527332 139529942 + Gper1 protein_coding processed_transcript MGP_BALBcJ_T0001753.1 MGP_BALBcJ_G0001668.1 mouse_genomes_project 5 110657296 110657836 + TEC TEC MGP_BALBcJ_T0074713.1 MGP_BALBcJ_G0030121.1 mouse_genomes_project 5 130031497 130044163 + MGP_BALBcJ_P0074713 Tmem248 protein_coding protein_coding MGP_BALBcJ_T0074714.1 MGP_BALBcJ_G0030121.1 mouse_genomes_project 5 130034160 130058481 + MGP_BALBcJ_P0074714 Tmem248 protein_coding protein_coding MGP_BALBcJ_T0074715.1 MGP_BALBcJ_G0030121.1 mouse_genomes_project 5 130034160 130046517 + MGP_BALBcJ_P0074715 Tmem248 protein_coding protein_coding MGP_BALBcJ_T0074716.1 MGP_BALBcJ_G0030121.1 mouse_genomes_project 5 130034256 130046393 + MGP_BALBcJ_P0074716 Tmem248 protein_coding protein_coding MGP_BALBcJ_T0074717.1 MGP_BALBcJ_G0030121.1 mouse_genomes_project 5 130036752 130058382 + MGP_BALBcJ_P0074717 Tmem248 protein_coding protein_coding MGP_BALBcJ_T0001883.1 MGP_BALBcJ_G0001796.1 mouse_genomes_project 5 138716564 138718363 + TEC TEC MGP_BALBcJ_T0008403.1 MGP_BALBcJ_G0006813.1 mouse_genomes_project 5 140010999 140017486 + Gm42423 lincRNA lincRNA MGP_BALBcJ_T0070917.1 MGP_BALBcJ_G0029403.1 mouse_genomes_project 5 29088584 29091321 + 4930548H24Rik protein_coding retained_intron MGP_BALBcJ_T0070918.1 MGP_BALBcJ_G0029403.1 mouse_genomes_project 5 29088703 29091321 + MGP_BALBcJ_P0070918 4930548H24Rik protein_coding protein_coding MGP_BALBcJ_T0001877.1 MGP_BALBcJ_G0001790.1 mouse_genomes_project 5 135154256 135155060 + TEC TEC MGP_BALBcJ_T0001752.1 MGP_BALBcJ_G0001667.1 mouse_genomes_project 5 110618594 110620973 + TEC TEC MGP_BALBcJ_T0075351.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138138581 138139699 - Mcm7 protein_coding retained_intron MGP_BALBcJ_T0075352.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138138581 138145801 - MGP_BALBcJ_P0075352 Mcm7 protein_coding protein_coding MGP_BALBcJ_T0075353.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138138700 138145739 - MGP_BALBcJ_P0075353 Mcm7 protein_coding protein_coding MGP_BALBcJ_T0075354.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138142042 138144364 - Mcm7 protein_coding retained_intron MGP_BALBcJ_T0075355.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138142438 138145249 - MGP_BALBcJ_P0075355 Mcm7 protein_coding protein_coding MGP_BALBcJ_T0075356.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138142691 138143626 - Mcm7 protein_coding retained_intron MGP_BALBcJ_T0075357.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138142860 138145000 - MGP_BALBcJ_P0075357 Mcm7 protein_coding protein_coding MGP_BALBcJ_T0075358.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138142861 138145798 - MGP_BALBcJ_P0075358 Mcm7 protein_coding protein_coding MGP_BALBcJ_T0075359.1 MGP_BALBcJ_G0030239.1 mouse_genomes_project 5 138143191 138144644 - MGP_BALBcJ_P0075359 Mcm7 protein_coding protein_coding MGP_BALBcJ_T0001895.1 MGP_BALBcJ_G0001808.1 mouse_genomes_project 5 143970489 143975242 + TEC TEC MGP_BALBcJ_T0070612.1 MGP_BALBcJ_G0029355.1 mouse_genomes_project 5 27288394 27288694 - MGP_BALBcJ_P0070612 Gm5129 protein_coding protein_coding MGP_BALBcJ_T0004705.1 MGP_BALBcJ_G0004071.1 mouse_genomes_project 5 74931964 74932442 + 2310040G07Rik antisense antisense MGP_BALBcJ_T0004706.1 MGP_BALBcJ_G0004071.1 mouse_genomes_project 5 74932204 74945324 + 2310040G07Rik antisense antisense MGP_BALBcJ_T0075682.1 MGP_BALBcJ_G0030311.1 mouse_genomes_project 5 143429779 143444070 + MGP_BALBcJ_P0075682 Zfp12 protein_coding protein_coding MGP_BALBcJ_T0075683.1 MGP_BALBcJ_G0030311.1 mouse_genomes_project 5 143429790 143444956 + MGP_BALBcJ_P0075683 Zfp12 protein_coding protein_coding MGP_BALBcJ_T0075684.1 MGP_BALBcJ_G0030311.1 mouse_genomes_project 5 143429863 143444078 + MGP_BALBcJ_P0075684 Zfp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075685.1 MGP_BALBcJ_G0030311.1 mouse_genomes_project 5 143430395 143436202 + MGP_BALBcJ_P0075685 Zfp12 protein_coding protein_coding MGP_BALBcJ_T0075686.1 MGP_BALBcJ_G0030311.1 mouse_genomes_project 5 143436160 143440752 + Zfp12 protein_coding processed_transcript MGP_BALBcJ_T0004640.1 MGP_BALBcJ_G0004018.1 mouse_genomes_project 5 28679806 28681384 - Gm15469 antisense antisense MGP_BALBcJ_T0101729.1 MGP_BALBcJ_G0039701.1 mouse_genomes_project 5 114346326 114346946 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0071475.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36189428 36224602 - MGP_BALBcJ_P0071475 Wdr1 protein_coding protein_coding MGP_BALBcJ_T0071476.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36190193 36192740 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0071477.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36190200 36224431 - MGP_BALBcJ_P0071477 Wdr1 protein_coding protein_coding MGP_BALBcJ_T0071478.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36190334 36192628 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0071479.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36191808 36192464 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0071480.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36192581 36194611 - Wdr1 protein_coding processed_transcript MGP_BALBcJ_T0071481.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36202956 36224346 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0071482.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36208473 36226019 - Wdr1 protein_coding processed_transcript MGP_BALBcJ_T0071483.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36214023 36224602 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0071484.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36220428 36224339 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0071485.1 MGP_BALBcJ_G0029490.1 mouse_genomes_project 5 36223704 36224371 - Wdr1 protein_coding retained_intron MGP_BALBcJ_T0001742.1 MGP_BALBcJ_G0001657.1 mouse_genomes_project 5 106103814 106107384 - TEC TEC MGP_BALBcJ_T0008130.1 MGP_BALBcJ_G0006625.1 mouse_genomes_project 5 62464828 62481608 - Gm3716 lincRNA lincRNA MGP_BALBcJ_T0008131.1 MGP_BALBcJ_G0006625.1 mouse_genomes_project 5 62466199 62474126 - Gm3716 lincRNA lincRNA MGP_BALBcJ_T0072484.1 MGP_BALBcJ_G0029678.1 mouse_genomes_project 5 86578189 86578270 - MGP_BALBcJ_P0072484 Gm11115 protein_coding protein_coding MGP_BALBcJ_T0004870.1 MGP_BALBcJ_G0004187.1 mouse_genomes_project 5 149740342 149745459 - Gm19719 antisense antisense MGP_BALBcJ_T0101717.1 MGP_BALBcJ_G0039694.1 mouse_genomes_project 5 70556503 70557707 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0072583.1 MGP_BALBcJ_G0029709.1 mouse_genomes_project 5 89281051 89287714 + Mthfd2l protein_coding processed_transcript MGP_BALBcJ_T0072584.1 MGP_BALBcJ_G0029709.1 mouse_genomes_project 5 89281190 89283367 + MGP_BALBcJ_P0072584 Mthfd2l protein_coding protein_coding MGP_BALBcJ_T0072585.1 MGP_BALBcJ_G0029709.1 mouse_genomes_project 5 89281214 89367605 + MGP_BALBcJ_P0072585 Mthfd2l protein_coding protein_coding MGP_BALBcJ_T0072586.1 MGP_BALBcJ_G0029709.1 mouse_genomes_project 5 89299393 89325589 + Mthfd2l protein_coding retained_intron MGP_BALBcJ_T0008204.1 MGP_BALBcJ_G0006685.1 mouse_genomes_project 5 98902693 98906806 + Gm9932 lincRNA lincRNA MGP_BALBcJ_T0004612.1 MGP_BALBcJ_G0003995.1 mouse_genomes_project 5 550715 551449 - Gm43825 antisense antisense MGP_BALBcJ_T0102559.1 MGP_BALBcJ_G0040375.1 mouse_genomes_project 5 358360 358528 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0072587.1 MGP_BALBcJ_G0029710.1 mouse_genomes_project 5 89373076 89380104 + MGP_BALBcJ_P0072587 Epgn protein_coding protein_coding MGP_BALBcJ_T0072588.1 MGP_BALBcJ_G0029710.1 mouse_genomes_project 5 89373076 89381106 + MGP_BALBcJ_P0072588 Epgn protein_coding protein_coding MGP_BALBcJ_T0072766.1 MGP_BALBcJ_G0029750.1 mouse_genomes_project 5 97004322 97482517 + MGP_BALBcJ_P0072766 1700007G11Rik protein_coding protein_coding MGP_BALBcJ_T0072767.1 MGP_BALBcJ_G0029750.1 mouse_genomes_project 5 97004369 97020376 + 1700007G11Rik protein_coding processed_transcript MGP_BALBcJ_T0072768.1 MGP_BALBcJ_G0029750.1 mouse_genomes_project 5 97004374 97020771 + 1700007G11Rik protein_coding processed_transcript MGP_BALBcJ_T0072769.1 MGP_BALBcJ_G0029750.1 mouse_genomes_project 5 97004388 97482545 + MGP_BALBcJ_P0072769 1700007G11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099939.1 MGP_BALBcJ_G0037975.1 mouse_genomes_project 5 80946132 80946229 + Gm24129 snRNA snRNA MGP_BALBcJ_T0076123.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151546227 151699230 - MGP_BALBcJ_P0076123 Stard13 protein_coding protein_coding MGP_BALBcJ_T0076124.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151548254 151699130 - MGP_BALBcJ_P0076124 Stard13 protein_coding protein_coding MGP_BALBcJ_T0076125.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151572045 151699236 - Stard13 protein_coding processed_transcript MGP_BALBcJ_T0076126.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151572146 151597992 - Stard13 protein_coding processed_transcript MGP_BALBcJ_T0076128.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151572149 151743761 - MGP_BALBcJ_P0076128 Stard13 protein_coding protein_coding MGP_BALBcJ_T0076129.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151572196 151604582 - Stard13 protein_coding processed_transcript MGP_BALBcJ_T0076130.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151580009 151699186 - Stard13 protein_coding retained_intron MGP_BALBcJ_T0076131.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151582053 151743823 - MGP_BALBcJ_P0076131 Stard13 protein_coding protein_coding MGP_BALBcJ_T0076132.1 MGP_BALBcJ_G0030397.1 mouse_genomes_project 5 151604255 151617558 - Stard13 protein_coding processed_transcript MGP_BALBcJ_T0099958.1 MGP_BALBcJ_G0037994.1 mouse_genomes_project 5 106272769 106272871 + Gm22557 snRNA snRNA MGP_BALBcJ_T0073523.1 MGP_BALBcJ_G0029910.1 mouse_genomes_project 5 113754764 113774431 - MGP_BALBcJ_P0073523 Foxn4 protein_coding protein_coding MGP_BALBcJ_T0073524.1 MGP_BALBcJ_G0029910.1 mouse_genomes_project 5 113756185 113763753 - MGP_BALBcJ_P0073524 Foxn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073525.1 MGP_BALBcJ_G0029910.1 mouse_genomes_project 5 113760975 113774326 - MGP_BALBcJ_P0073525 Foxn4 protein_coding protein_coding MGP_BALBcJ_T0073526.1 MGP_BALBcJ_G0029910.1 mouse_genomes_project 5 113763338 113774373 - Foxn4 protein_coding retained_intron MGP_BALBcJ_T0074765.1 MGP_BALBcJ_G0030131.1 mouse_genomes_project 5 134016914 134058620 + MGP_BALBcJ_P0074765 Gtf2ird2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074766.1 MGP_BALBcJ_G0030131.1 mouse_genomes_project 5 134016928 134051029 + MGP_BALBcJ_P0074766 Gtf2ird2 protein_coding protein_coding MGP_BALBcJ_T0074767.1 MGP_BALBcJ_G0030131.1 mouse_genomes_project 5 134030889 134031517 + Gtf2ird2 protein_coding processed_transcript MGP_BALBcJ_T0074768.1 MGP_BALBcJ_G0030131.1 mouse_genomes_project 5 134039529 134049091 + Gtf2ird2 protein_coding retained_intron MGP_BALBcJ_T0074769.1 MGP_BALBcJ_G0030131.1 mouse_genomes_project 5 134046985 134049489 + MGP_BALBcJ_P0074769 Gtf2ird2 protein_coding protein_coding MGP_BALBcJ_T0099914.1 MGP_BALBcJ_G0037950.1 mouse_genomes_project 5 30585740 30585840 + Gm24003 snRNA snRNA MGP_BALBcJ_T0015057.1 MGP_BALBcJ_G0013154.1 mouse_genomes_project 5 97129627 97130008 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0014960.1 MGP_BALBcJ_G0013057.1 mouse_genomes_project 5 55036401 55037137 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098606.1 MGP_BALBcJ_G0036660.1 mouse_genomes_project 5 19802286 19802399 - n-R5s170 rRNA rRNA MGP_BALBcJ_T0073983.1 MGP_BALBcJ_G0030002.1 mouse_genomes_project 5 121122746 121167777 + MGP_BALBcJ_P0073983 Naa25 protein_coding protein_coding MGP_BALBcJ_T0073984.1 MGP_BALBcJ_G0030002.1 mouse_genomes_project 5 121122804 121164183 + MGP_BALBcJ_P0073984 Naa25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073985.1 MGP_BALBcJ_G0030002.1 mouse_genomes_project 5 121122805 121151883 + Naa25 protein_coding retained_intron MGP_BALBcJ_T0073986.1 MGP_BALBcJ_G0030002.1 mouse_genomes_project 5 121122815 121165294 + MGP_BALBcJ_P0073986 Naa25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073988.1 MGP_BALBcJ_G0030002.1 mouse_genomes_project 5 121164780 121169745 + MGP_BALBcJ_P0073988 Naa25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073989.1 MGP_BALBcJ_G0030002.1 mouse_genomes_project 5 121165365 121165879 + Naa25 protein_coding processed_transcript MGP_BALBcJ_T0099902.1 MGP_BALBcJ_G0037938.1 mouse_genomes_project 5 6796335 6796437 - Gm23312 snRNA snRNA MGP_BALBcJ_T0073935.1 MGP_BALBcJ_G0029989.1 mouse_genomes_project 5 120418536 120443116 - MGP_BALBcJ_P0073935 Oas3 protein_coding protein_coding MGP_BALBcJ_T0073936.1 MGP_BALBcJ_G0029989.1 mouse_genomes_project 5 120419654 120421697 - MGP_BALBcJ_P0073936 Oas3 protein_coding protein_coding MGP_BALBcJ_T0073937.1 MGP_BALBcJ_G0029989.1 mouse_genomes_project 5 120420837 120423093 - Oas3 protein_coding retained_intron MGP_BALBcJ_T0073938.1 MGP_BALBcJ_G0029989.1 mouse_genomes_project 5 120429403 120443095 - Oas3 protein_coding retained_intron MGP_BALBcJ_T0072282.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74948872 74965646 + MGP_BALBcJ_P0072282 Paics protein_coding protein_coding MGP_BALBcJ_T0072283.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74948913 74965650 + MGP_BALBcJ_P0072283 Paics protein_coding protein_coding MGP_BALBcJ_T0072284.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74948933 74965454 + MGP_BALBcJ_P0072284 Paics protein_coding protein_coding MGP_BALBcJ_T0072285.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74948947 74957498 + MGP_BALBcJ_P0072285 Paics protein_coding protein_coding MGP_BALBcJ_T0072286.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74949342 74960627 + MGP_BALBcJ_P0072286 Paics protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072287.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74959623 74961118 + Paics protein_coding retained_intron MGP_BALBcJ_T0072288.1 MGP_BALBcJ_G0029627.1 mouse_genomes_project 5 74964297 74964982 + Paics protein_coding retained_intron MGP_BALBcJ_T0015052.1 MGP_BALBcJ_G0013149.1 mouse_genomes_project 5 91729481 91731942 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0070171.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136286 6180605 - MGP_BALBcJ_P0070171 Dmtf1 protein_coding protein_coding MGP_BALBcJ_T0070172.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136309 6170441 - MGP_BALBcJ_P0070172 Dmtf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0070173.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136353 6180548 - MGP_BALBcJ_P0070173 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070174.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136357 6180578 - MGP_BALBcJ_P0070174 Dmtf1 protein_coding protein_coding MGP_BALBcJ_T0070175.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136358 6180581 - MGP_BALBcJ_P0070175 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070176.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136358 6180588 - MGP_BALBcJ_P0070176 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070177.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136362 6180572 - MGP_BALBcJ_P0070177 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070178.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136362 6171688 - MGP_BALBcJ_P0070178 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070179.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6136555 6180500 - MGP_BALBcJ_P0070179 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070180.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6137278 6138217 - Dmtf1 protein_coding retained_intron MGP_BALBcJ_T0070181.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6137492 6180530 - MGP_BALBcJ_P0070181 Dmtf1 protein_coding protein_coding MGP_BALBcJ_T0070182.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6138939 6144063 - MGP_BALBcJ_P0070182 Dmtf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0070183.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6139543 6180572 - Dmtf1 protein_coding processed_transcript MGP_BALBcJ_T0070184.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6146852 6180566 - Dmtf1 protein_coding retained_intron MGP_BALBcJ_T0070185.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6148773 6180545 - MGP_BALBcJ_P0070185 Dmtf1 protein_coding protein_coding MGP_BALBcJ_T0070186.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6150044 6170585 - MGP_BALBcJ_P0070186 Dmtf1 protein_coding protein_coding MGP_BALBcJ_T0070187.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6157301 6180563 - Dmtf1 protein_coding retained_intron MGP_BALBcJ_T0070188.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6164907 6180578 - Dmtf1 protein_coding retained_intron MGP_BALBcJ_T0070189.1 MGP_BALBcJ_G0029271.1 mouse_genomes_project 5 6168973 6171478 - MGP_BALBcJ_P0070189 Dmtf1 protein_coding protein_coding MGP_BALBcJ_T0075506.1 MGP_BALBcJ_G0030270.1 mouse_genomes_project 5 139509358 139519711 + MGP_BALBcJ_P0075506 C130050O18Rik protein_coding protein_coding MGP_BALBcJ_T0075507.1 MGP_BALBcJ_G0030270.1 mouse_genomes_project 5 139510469 139519708 + MGP_BALBcJ_P0075507 C130050O18Rik protein_coding protein_coding MGP_BALBcJ_T0075508.1 MGP_BALBcJ_G0030270.1 mouse_genomes_project 5 139510547 139519713 + MGP_BALBcJ_P0075508 C130050O18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010665.1 MGP_BALBcJ_G0008790.1 mouse_genomes_project 5 62524316 62524433 - Gm25306 miRNA miRNA MGP_BALBcJ_T0014942.1 MGP_BALBcJ_G0013039.1 mouse_genomes_project 5 45637566 45638088 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071797.1 MGP_BALBcJ_G0029548.1 mouse_genomes_project 5 62957584 62995188 - Tmem156 protein_coding processed_transcript MGP_BALBcJ_T0071798.1 MGP_BALBcJ_G0029548.1 mouse_genomes_project 5 62966144 62995143 - MGP_BALBcJ_P0071798 Tmem156 protein_coding protein_coding MGP_BALBcJ_T0071799.1 MGP_BALBcJ_G0029548.1 mouse_genomes_project 5 62968692 62983570 - MGP_BALBcJ_P0071799 Tmem156 protein_coding unknown_likely_coding MGP_BALBcJ_T0071800.1 MGP_BALBcJ_G0029548.1 mouse_genomes_project 5 62994273 62995184 - Tmem156 protein_coding retained_intron MGP_BALBcJ_T0071972.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65250394 65302006 + MGP_BALBcJ_P0071972 Slc30a9 protein_coding protein_coding MGP_BALBcJ_T0071973.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65250394 65302003 + MGP_BALBcJ_P0071973 Slc30a9 protein_coding protein_coding MGP_BALBcJ_T0071974.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65250403 65253198 + Slc30a9 protein_coding retained_intron MGP_BALBcJ_T0071975.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65250404 65299349 + MGP_BALBcJ_P0071975 Slc30a9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071976.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65250623 65262322 + Slc30a9 protein_coding processed_transcript MGP_BALBcJ_T0071977.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65259142 65285394 + MGP_BALBcJ_P0071977 Slc30a9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071978.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65259168 65272168 + MGP_BALBcJ_P0071978 Slc30a9 protein_coding protein_coding MGP_BALBcJ_T0071979.1 MGP_BALBcJ_G0029571.1 mouse_genomes_project 5 65275767 65296919 + Slc30a9 protein_coding retained_intron MGP_BALBcJ_T0075236.1 MGP_BALBcJ_G0030211.1 mouse_genomes_project 5 137529995 137533850 - MGP_BALBcJ_P0075236 Mospd3 protein_coding protein_coding MGP_BALBcJ_T0075237.1 MGP_BALBcJ_G0030211.1 mouse_genomes_project 5 137529995 137534186 - MGP_BALBcJ_P0075237 Mospd3 protein_coding protein_coding MGP_BALBcJ_T0075238.1 MGP_BALBcJ_G0030211.1 mouse_genomes_project 5 137530598 137533942 - Mospd3 protein_coding processed_transcript MGP_BALBcJ_T0075239.1 MGP_BALBcJ_G0030211.1 mouse_genomes_project 5 137530650 137534200 - MGP_BALBcJ_P0075239 Mospd3 protein_coding protein_coding MGP_BALBcJ_T0075240.1 MGP_BALBcJ_G0030211.1 mouse_genomes_project 5 137533175 137533866 - MGP_BALBcJ_P0075240 Mospd3 protein_coding protein_coding MGP_BALBcJ_T0075241.1 MGP_BALBcJ_G0030211.1 mouse_genomes_project 5 137533224 137533833 - Mospd3 protein_coding retained_intron MGP_BALBcJ_T0004844.1 MGP_BALBcJ_G0004172.1 mouse_genomes_project 5 138327522 138330141 + 6330418K02Rik antisense antisense MGP_BALBcJ_T0004845.1 MGP_BALBcJ_G0004172.1 mouse_genomes_project 5 138327533 138329812 + 6330418K02Rik antisense antisense MGP_BALBcJ_T0004846.1 MGP_BALBcJ_G0004172.1 mouse_genomes_project 5 138327548 138330141 + 6330418K02Rik antisense antisense MGP_BALBcJ_T0004847.1 MGP_BALBcJ_G0004172.1 mouse_genomes_project 5 138327587 138329709 + 6330418K02Rik antisense antisense MGP_BALBcJ_T0004848.1 MGP_BALBcJ_G0004172.1 mouse_genomes_project 5 138329023 138329563 + 6330418K02Rik antisense antisense MGP_BALBcJ_T0099978.1 MGP_BALBcJ_G0038014.1 mouse_genomes_project 5 139548315 139548422 + Gm26285 snRNA snRNA MGP_BALBcJ_T0001515.1 MGP_BALBcJ_G0001433.1 mouse_genomes_project 5 37091941 37093533 - TEC TEC MGP_BALBcJ_T0001581.1 MGP_BALBcJ_G0001498.1 mouse_genomes_project 5 48471505 48474214 + TEC TEC MGP_BALBcJ_T0001464.1 MGP_BALBcJ_G0001385.1 mouse_genomes_project 5 16569218 16572334 - TEC TEC MGP_BALBcJ_T0004647.1 MGP_BALBcJ_G0004024.1 mouse_genomes_project 5 31867870 31868871 + Gm42846 antisense antisense MGP_BALBcJ_T0073232.1 MGP_BALBcJ_G0029855.1 mouse_genomes_project 5 109557831 109578258 + MGP_BALBcJ_P0073232 Zfp605 protein_coding protein_coding MGP_BALBcJ_T0073233.1 MGP_BALBcJ_G0029855.1 mouse_genomes_project 5 109558075 109575924 + Zfp605 protein_coding processed_transcript MGP_BALBcJ_T0073234.1 MGP_BALBcJ_G0029855.1 mouse_genomes_project 5 109558090 109575882 + MGP_BALBcJ_P0073234 Zfp605 protein_coding protein_coding MGP_BALBcJ_T0073235.1 MGP_BALBcJ_G0029855.1 mouse_genomes_project 5 109559791 109577566 + MGP_BALBcJ_P0073235 Zfp605 protein_coding protein_coding MGP_BALBcJ_T0074840.1 MGP_BALBcJ_G0030136.1 mouse_genomes_project 5 134409441 134411467 - MGP_BALBcJ_P0074840 Syna protein_coding protein_coding MGP_BALBcJ_T0001700.1 MGP_BALBcJ_G0001615.1 mouse_genomes_project 5 74295500 74299676 - TEC TEC MGP_BALBcJ_T0001725.1 MGP_BALBcJ_G0001640.1 mouse_genomes_project 5 97020494 97023375 + TEC TEC MGP_BALBcJ_T0075427.1 MGP_BALBcJ_G0030257.1 mouse_genomes_project 5 138720475 138738237 + MGP_BALBcJ_P0075427 A430033K04Rik protein_coding protein_coding MGP_BALBcJ_T0075428.1 MGP_BALBcJ_G0030257.1 mouse_genomes_project 5 138720492 138749924 + MGP_BALBcJ_P0075428 A430033K04Rik protein_coding protein_coding MGP_BALBcJ_T0075429.1 MGP_BALBcJ_G0030257.1 mouse_genomes_project 5 138720510 138746281 + MGP_BALBcJ_P0075429 A430033K04Rik protein_coding protein_coding MGP_BALBcJ_T0071264.1 MGP_BALBcJ_G0029452.1 mouse_genomes_project 5 32757416 32781820 + MGP_BALBcJ_P0071264 Dok7 protein_coding protein_coding MGP_BALBcJ_T0071265.1 MGP_BALBcJ_G0029452.1 mouse_genomes_project 5 32757512 32781820 + MGP_BALBcJ_P0071265 Dok7 protein_coding protein_coding MGP_BALBcJ_T0071266.1 MGP_BALBcJ_G0029452.1 mouse_genomes_project 5 32757538 32767054 + MGP_BALBcJ_P0071266 Dok7 protein_coding protein_coding MGP_BALBcJ_T0071267.1 MGP_BALBcJ_G0029452.1 mouse_genomes_project 5 32757727 32788695 + MGP_BALBcJ_P0071267 Dok7 protein_coding protein_coding MGP_BALBcJ_T0071268.1 MGP_BALBcJ_G0029452.1 mouse_genomes_project 5 32775813 32781820 + Dok7 protein_coding retained_intron MGP_BALBcJ_T0101225.1 MGP_BALBcJ_G0039261.1 mouse_genomes_project 5 117887148 117887280 + Gm25076 snoRNA snoRNA MGP_BALBcJ_T0075627.1 MGP_BALBcJ_G0030300.1 mouse_genomes_project 5 142726624 142773576 - MGP_BALBcJ_P0075627 Mmd2 protein_coding protein_coding MGP_BALBcJ_T0075628.1 MGP_BALBcJ_G0030300.1 mouse_genomes_project 5 142745602 142747478 - Mmd2 protein_coding retained_intron MGP_BALBcJ_T0075629.1 MGP_BALBcJ_G0030300.1 mouse_genomes_project 5 142746904 142773576 - Mmd2 protein_coding processed_transcript MGP_BALBcJ_T0075413.1 MGP_BALBcJ_G0030251.1 mouse_genomes_project 5 138403520 138404526 + MGP_BALBcJ_P0075413 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0008343.1 MGP_BALBcJ_G0006774.1 mouse_genomes_project 5 123834693 123858884 - Gm43661 lincRNA lincRNA MGP_BALBcJ_T0014832.1 MGP_BALBcJ_G0012929.1 mouse_genomes_project 5 5992188 5992383 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008139.1 MGP_BALBcJ_G0006632.1 mouse_genomes_project 5 71231433 71236991 + Gm34411 lincRNA lincRNA MGP_BALBcJ_T0010661.1 MGP_BALBcJ_G0008786.1 mouse_genomes_project 5 48848805 48848912 - Gm44377 miRNA miRNA MGP_BALBcJ_T0008408.1 MGP_BALBcJ_G0006817.1 mouse_genomes_project 5 143421388 143429365 + 4930448H16Rik lincRNA lincRNA MGP_BALBcJ_T0102580.1 MGP_BALBcJ_G0040396.1 mouse_genomes_project 5 125619072 125619755 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010690.1 MGP_BALBcJ_G0008815.1 mouse_genomes_project 5 115158456 115158517 + Mir7029 miRNA miRNA MGP_BALBcJ_T0073610.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114442135 114457738 + MGP_BALBcJ_P0073610 Oasl2 protein_coding protein_coding MGP_BALBcJ_T0073611.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114442200 114445342 + MGP_BALBcJ_P0073611 Oasl2 protein_coding protein_coding MGP_BALBcJ_T0073612.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114442229 114445126 + MGP_BALBcJ_P0073612 Oasl2 protein_coding protein_coding MGP_BALBcJ_T0073613.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114442731 114443550 + Oasl2 protein_coding retained_intron MGP_BALBcJ_T0073614.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114442775 114445431 + Oasl2 protein_coding retained_intron MGP_BALBcJ_T0073615.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114442941 114457730 + MGP_BALBcJ_P0073615 Oasl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073616.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114446508 114456724 + MGP_BALBcJ_P0073616 Oasl2 protein_coding protein_coding MGP_BALBcJ_T0073617.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114446997 114449298 + Oasl2 protein_coding retained_intron MGP_BALBcJ_T0073618.1 MGP_BALBcJ_G0029927.1 mouse_genomes_project 5 114449789 114452084 + Oasl2 protein_coding retained_intron MGP_BALBcJ_T0004862.1 MGP_BALBcJ_G0004182.1 mouse_genomes_project 5 144058822 144117645 - Gm17135 antisense antisense MGP_BALBcJ_T0000002.1 MGP_BALBcJ_G0000002.1 mouse_genomes_project 5 18076390 18080166 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_BALBcJ_T0000003.1 MGP_BALBcJ_G0000002.1 mouse_genomes_project 5 18076390 18080163 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_BALBcJ_T0004663.1 MGP_BALBcJ_G0004037.1 mouse_genomes_project 5 41196086 41203928 - Gm15866 antisense antisense MGP_BALBcJ_T0004664.1 MGP_BALBcJ_G0004037.1 mouse_genomes_project 5 41203443 41247672 - Gm15866 antisense antisense MGP_BALBcJ_T0008341.1 MGP_BALBcJ_G0006772.1 mouse_genomes_project 5 122958242 122960770 - Gm43409 lincRNA lincRNA MGP_BALBcJ_T0014895.1 MGP_BALBcJ_G0012992.1 mouse_genomes_project 5 24537750 24539432 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101231.1 MGP_BALBcJ_G0039267.1 mouse_genomes_project 5 147208457 147208586 + Gm23202 snoRNA snoRNA MGP_BALBcJ_T0001751.1 MGP_BALBcJ_G0001666.1 mouse_genomes_project 5 110493981 110494715 + TEC TEC MGP_BALBcJ_T0010718.1 MGP_BALBcJ_G0008843.1 mouse_genomes_project 5 140547146 140547217 + Mir7038 miRNA miRNA MGP_BALBcJ_T0098619.1 MGP_BALBcJ_G0036673.1 mouse_genomes_project 5 119711219 119711328 + n-R5s176 rRNA rRNA MGP_BALBcJ_T0073364.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111738302 111779171 + MGP_BALBcJ_P0073364 Tpst2 protein_coding protein_coding MGP_BALBcJ_T0073365.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111738315 111772944 + Tpst2 protein_coding retained_intron MGP_BALBcJ_T0073366.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111738318 111779165 + MGP_BALBcJ_P0073366 Tpst2 protein_coding protein_coding MGP_BALBcJ_T0073367.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111750816 111771644 + MGP_BALBcJ_P0073367 Tpst2 protein_coding protein_coding MGP_BALBcJ_T0073368.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111767788 111778767 + MGP_BALBcJ_P0073368 Tpst2 protein_coding protein_coding MGP_BALBcJ_T0073369.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111772198 111773724 + MGP_BALBcJ_P0073369 Tpst2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073370.1 MGP_BALBcJ_G0029879.1 mouse_genomes_project 5 111776705 111778774 + Tpst2 protein_coding retained_intron MGP_BALBcJ_T0074718.1 MGP_BALBcJ_G0030122.1 mouse_genomes_project 5 130060446 130068517 - MGP_BALBcJ_P0074718 Sbds protein_coding protein_coding MGP_BALBcJ_T0074719.1 MGP_BALBcJ_G0030122.1 mouse_genomes_project 5 130061120 130068392 - MGP_BALBcJ_P0074719 Sbds protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074720.1 MGP_BALBcJ_G0030122.1 mouse_genomes_project 5 130062599 130067070 - MGP_BALBcJ_P0074720 Sbds protein_coding protein_coding MGP_BALBcJ_T0074721.1 MGP_BALBcJ_G0030122.1 mouse_genomes_project 5 130063146 130068479 - Sbds protein_coding processed_transcript MGP_BALBcJ_T0074722.1 MGP_BALBcJ_G0030122.1 mouse_genomes_project 5 130065462 130068465 - Sbds protein_coding processed_transcript MGP_BALBcJ_T0010709.1 MGP_BALBcJ_G0008834.1 mouse_genomes_project 5 137216065 137216162 + Mir8116 miRNA miRNA MGP_BALBcJ_T0070512.1 MGP_BALBcJ_G0029332.1 mouse_genomes_project 5 22243495 22243817 - Crygn protein_coding processed_transcript MGP_BALBcJ_T0070513.1 MGP_BALBcJ_G0029332.1 mouse_genomes_project 5 22243495 22250499 - MGP_BALBcJ_P0070513 Crygn protein_coding protein_coding MGP_BALBcJ_T0010712.1 MGP_BALBcJ_G0008837.1 mouse_genomes_project 5 138139303 138139387 - Mir25 miRNA miRNA MGP_BALBcJ_T0008093.1 MGP_BALBcJ_G0006593.1 mouse_genomes_project 5 40680720 40692438 - Gm43700 lincRNA lincRNA MGP_BALBcJ_T0004747.1 MGP_BALBcJ_G0004100.1 mouse_genomes_project 5 107814045 108030039 + antisense antisense MGP_BALBcJ_T0014824.1 MGP_BALBcJ_G0012921.1 mouse_genomes_project 5 3389507 3389862 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001776.1 MGP_BALBcJ_G0001691.1 mouse_genomes_project 5 116053600 116054967 - TEC TEC MGP_BALBcJ_T0075096.1 MGP_BALBcJ_G0030185.1 mouse_genomes_project 5 136617817 136625909 + MGP_BALBcJ_P0075096 Myl10 protein_coding protein_coding MGP_BALBcJ_T0075097.1 MGP_BALBcJ_G0030185.1 mouse_genomes_project 5 136617849 136625807 + MGP_BALBcJ_P0075097 Myl10 protein_coding protein_coding MGP_BALBcJ_T0075098.1 MGP_BALBcJ_G0030185.1 mouse_genomes_project 5 136618368 136625909 + MGP_BALBcJ_P0075098 Myl10 protein_coding protein_coding MGP_BALBcJ_T0075099.1 MGP_BALBcJ_G0030185.1 mouse_genomes_project 5 136618840 136625909 + MGP_BALBcJ_P0075099 Myl10 protein_coding protein_coding MGP_BALBcJ_T0075100.1 MGP_BALBcJ_G0030185.1 mouse_genomes_project 5 136622760 136625909 + Myl10 protein_coding retained_intron MGP_BALBcJ_T0075101.1 MGP_BALBcJ_G0030185.1 mouse_genomes_project 5 136622811 136625907 + Myl10 protein_coding retained_intron MGP_BALBcJ_T0001888.1 MGP_BALBcJ_G0001801.1 mouse_genomes_project 5 141444807 141445768 - TEC TEC MGP_BALBcJ_T0070799.1 MGP_BALBcJ_G0029387.1 mouse_genomes_project 5 28660664 28681664 + MGP_BALBcJ_P0070799 Trim54 protein_coding protein_coding MGP_BALBcJ_T0070800.1 MGP_BALBcJ_G0029387.1 mouse_genomes_project 5 28660686 28681666 + MGP_BALBcJ_P0070800 Trim54 protein_coding protein_coding MGP_BALBcJ_T0075610.1 MGP_BALBcJ_G0030296.1 mouse_genomes_project 5 142561189 142579754 + MGP_BALBcJ_P0075610 Foxk1 protein_coding protein_coding MGP_BALBcJ_T0075611.1 MGP_BALBcJ_G0030296.1 mouse_genomes_project 5 142561192 142622669 + MGP_BALBcJ_P0075611 Foxk1 protein_coding protein_coding MGP_BALBcJ_T0004734.1 MGP_BALBcJ_G0004090.1 mouse_genomes_project 5 99399879 99406613 + Gm15777 antisense antisense MGP_BALBcJ_T0101217.1 MGP_BALBcJ_G0039253.1 mouse_genomes_project 5 98570137 98570213 + Gm26252 snoRNA snoRNA MGP_BALBcJ_T0098981.1 MGP_BALBcJ_G0037027.1 mouse_genomes_project 5 143055390 143059687 - D430018E03Rik sense_intronic sense_intronic MGP_BALBcJ_T0015093.1 MGP_BALBcJ_G0013190.1 mouse_genomes_project 5 108414324 108416209 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001778.1 MGP_BALBcJ_G0001693.1 mouse_genomes_project 5 116423851 116424284 + TEC TEC MGP_BALBcJ_T0072494.1 MGP_BALBcJ_G0029685.1 mouse_genomes_project 5 86929579 86931208 + MGP_BALBcJ_P0072494 Utp3 protein_coding protein_coding MGP_BALBcJ_T0001483.1 MGP_BALBcJ_G0001403.1 mouse_genomes_project 5 27510806 27514807 - TEC TEC MGP_BALBcJ_T0070569.1 MGP_BALBcJ_G0029345.1 mouse_genomes_project 5 25646059 25653361 + MGP_BALBcJ_P0070569 Insig1 protein_coding protein_coding MGP_BALBcJ_T0070570.1 MGP_BALBcJ_G0029345.1 mouse_genomes_project 5 25649362 25651748 + Insig1 protein_coding retained_intron MGP_BALBcJ_T0015085.1 MGP_BALBcJ_G0013182.1 mouse_genomes_project 5 107040227 107040649 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008466.1 MGP_BALBcJ_G0006860.1 mouse_genomes_project 5 152158742 152169977 + lincRNA lincRNA MGP_BALBcJ_T0101193.1 MGP_BALBcJ_G0039229.1 mouse_genomes_project 5 52523457 52523586 + Gm24235 snoRNA snoRNA MGP_BALBcJ_T0004712.1 MGP_BALBcJ_G0004077.1 mouse_genomes_project 5 86172916 86248243 - 1700066N21Rik antisense antisense MGP_BALBcJ_T0001715.1 MGP_BALBcJ_G0001630.1 mouse_genomes_project 5 91521388 91523478 + TEC TEC MGP_BALBcJ_T0008088.1 MGP_BALBcJ_G0006590.1 mouse_genomes_project 5 37107982 37128823 + Gm42524 lincRNA lincRNA MGP_BALBcJ_T0072511.1 MGP_BALBcJ_G0029689.1 mouse_genomes_project 5 87140914 87159262 + MGP_BALBcJ_P0072511 Dck protein_coding protein_coding MGP_BALBcJ_T0072512.1 MGP_BALBcJ_G0029689.1 mouse_genomes_project 5 87145279 87146098 + Dck protein_coding retained_intron MGP_BALBcJ_T0073324.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110246786 110272742 - MGP_BALBcJ_P0073324 Ulk1 protein_coding protein_coding MGP_BALBcJ_T0073325.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110248676 110250622 - MGP_BALBcJ_P0073325 Ulk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073326.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110248698 110251730 - MGP_BALBcJ_P0073326 Ulk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0073327.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110248715 110249898 - Ulk1 protein_coding retained_intron MGP_BALBcJ_T0073328.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110248770 110272698 - MGP_BALBcJ_P0073328 Ulk1 protein_coding protein_coding MGP_BALBcJ_T0073329.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110250567 110251344 - Ulk1 protein_coding retained_intron MGP_BALBcJ_T0073330.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110250933 110252143 - Ulk1 protein_coding retained_intron MGP_BALBcJ_T0073331.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110254076 110254871 - Ulk1 protein_coding retained_intron MGP_BALBcJ_T0073332.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110254351 110256085 - Ulk1 protein_coding retained_intron MGP_BALBcJ_T0073333.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110255074 110258476 - Ulk1 protein_coding processed_transcript MGP_BALBcJ_T0073334.1 MGP_BALBcJ_G0029870.1 mouse_genomes_project 5 110256280 110258513 - Ulk1 protein_coding retained_intron MGP_BALBcJ_T0001547.1 MGP_BALBcJ_G0001465.1 mouse_genomes_project 5 43514739 43515864 + TEC TEC MGP_BALBcJ_T0074691.1 MGP_BALBcJ_G0030117.1 mouse_genomes_project 5 129831873 129867510 + MGP_BALBcJ_P0074691 Crcp protein_coding protein_coding MGP_BALBcJ_T0074692.1 MGP_BALBcJ_G0030117.1 mouse_genomes_project 5 129831894 129866792 + MGP_BALBcJ_P0074692 Crcp protein_coding protein_coding MGP_BALBcJ_T0074693.1 MGP_BALBcJ_G0030117.1 mouse_genomes_project 5 129831911 129866835 + Crcp protein_coding processed_transcript MGP_BALBcJ_T0074694.1 MGP_BALBcJ_G0030117.1 mouse_genomes_project 5 129831926 129866653 + Crcp protein_coding processed_transcript MGP_BALBcJ_T0074695.1 MGP_BALBcJ_G0030117.1 mouse_genomes_project 5 129839004 129866575 + MGP_BALBcJ_P0074695 Crcp protein_coding protein_coding MGP_BALBcJ_T0074696.1 MGP_BALBcJ_G0030117.1 mouse_genomes_project 5 129849055 129867131 + Crcp protein_coding processed_transcript MGP_BALBcJ_T0099973.1 MGP_BALBcJ_G0038009.1 mouse_genomes_project 5 126302316 126302423 - Gm24839 snRNA snRNA MGP_BALBcJ_T0098982.1 MGP_BALBcJ_G0037028.1 mouse_genomes_project 5 143230123 143231025 - Gm43378 sense_intronic sense_intronic MGP_BALBcJ_T0074393.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914810 123917575 + Ogfod2 protein_coding retained_intron MGP_BALBcJ_T0074394.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914814 123916996 + MGP_BALBcJ_P0074394 Ogfod2 protein_coding protein_coding MGP_BALBcJ_T0074395.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914827 123917979 + MGP_BALBcJ_P0074395 Ogfod2 protein_coding protein_coding MGP_BALBcJ_T0074396.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914829 123916864 + Ogfod2 protein_coding retained_intron MGP_BALBcJ_T0074397.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914829 123916952 + MGP_BALBcJ_P0074397 Ogfod2 protein_coding protein_coding MGP_BALBcJ_T0074398.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914846 123917256 + MGP_BALBcJ_P0074398 Ogfod2 protein_coding protein_coding MGP_BALBcJ_T0074399.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123914920 123917457 + MGP_BALBcJ_P0074399 Ogfod2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074400.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123915304 123916707 + Ogfod2 protein_coding retained_intron MGP_BALBcJ_T0074401.1 MGP_BALBcJ_G0030064.1 mouse_genomes_project 5 123915792 123917372 + Ogfod2 protein_coding retained_intron MGP_BALBcJ_T0069951.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 472179 498596 + MGP_BALBcJ_P0069951 Fam133b protein_coding protein_coding MGP_BALBcJ_T0069952.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 472182 489394 + Fam133b protein_coding retained_intron MGP_BALBcJ_T0069953.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 472184 498098 + MGP_BALBcJ_P0069953 Fam133b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0069954.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 472184 498098 + MGP_BALBcJ_P0069954 Fam133b protein_coding protein_coding MGP_BALBcJ_T0069955.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 472190 498171 + Fam133b protein_coding retained_intron MGP_BALBcJ_T0069956.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 488009 493081 + Fam133b protein_coding retained_intron MGP_BALBcJ_T0069957.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 493396 494088 + Fam133b protein_coding retained_intron MGP_BALBcJ_T0069958.1 MGP_BALBcJ_G0029238.1 mouse_genomes_project 5 495199 497389 + Fam133b protein_coding retained_intron MGP_BALBcJ_T0071650.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47611183 47711830 - MGP_BALBcJ_P0071650 Adgra3 protein_coding protein_coding MGP_BALBcJ_T0071651.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47617335 47623300 - Adgra3 protein_coding processed_transcript MGP_BALBcJ_T0071652.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47638874 47652619 - Adgra3 protein_coding processed_transcript MGP_BALBcJ_T0071653.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47659154 47662477 - Adgra3 protein_coding retained_intron MGP_BALBcJ_T0071654.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47703213 47706203 - Adgra3 protein_coding retained_intron MGP_BALBcJ_T0071655.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47703693 47711469 - Adgra3 protein_coding processed_transcript MGP_BALBcJ_T0071656.1 MGP_BALBcJ_G0029518.1 mouse_genomes_project 5 47710947 47711469 - Adgra3 protein_coding retained_intron MGP_BALBcJ_T0075664.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143173289 143294050 - MGP_BALBcJ_P0075664 Rnf216 protein_coding protein_coding MGP_BALBcJ_T0075665.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143174216 143294036 - MGP_BALBcJ_P0075665 Rnf216 protein_coding protein_coding MGP_BALBcJ_T0075666.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143175013 143279668 - MGP_BALBcJ_P0075666 Rnf216 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075667.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143175045 143279668 - MGP_BALBcJ_P0075667 Rnf216 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075668.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143196105 143197507 - Rnf216 protein_coding retained_intron MGP_BALBcJ_T0075669.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143248314 143294036 - Rnf216 protein_coding retained_intron MGP_BALBcJ_T0075670.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143262210 143269019 - Rnf216 protein_coding retained_intron MGP_BALBcJ_T0075671.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143271464 143294036 - Rnf216 protein_coding processed_transcript MGP_BALBcJ_T0075672.1 MGP_BALBcJ_G0030307.1 mouse_genomes_project 5 143271653 143294038 - Rnf216 protein_coding processed_transcript MGP_BALBcJ_T0001801.1 MGP_BALBcJ_G0001716.1 mouse_genomes_project 5 121598798 121600276 - TEC TEC MGP_BALBcJ_T0001796.1 MGP_BALBcJ_G0001711.1 mouse_genomes_project 5 121127482 121129348 + TEC TEC MGP_BALBcJ_T0072714.1 MGP_BALBcJ_G0029736.1 mouse_genomes_project 5 91550815 91558621 + MGP_BALBcJ_P0072714 2010109A12Rik protein_coding protein_coding MGP_BALBcJ_T0072715.1 MGP_BALBcJ_G0029736.1 mouse_genomes_project 5 91550830 91551747 + 2010109A12Rik protein_coding retained_intron MGP_BALBcJ_T0015048.1 MGP_BALBcJ_G0013145.1 mouse_genomes_project 5 90147702 90148197 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0071834.1 MGP_BALBcJ_G0029554.1 mouse_genomes_project 5 63301732 63306204 + Lias protein_coding retained_intron MGP_BALBcJ_T0071835.1 MGP_BALBcJ_G0029554.1 mouse_genomes_project 5 63301736 63318819 + MGP_BALBcJ_P0071835 Lias protein_coding protein_coding MGP_BALBcJ_T0071836.1 MGP_BALBcJ_G0029554.1 mouse_genomes_project 5 63301752 63305633 + Lias protein_coding retained_intron MGP_BALBcJ_T0071837.1 MGP_BALBcJ_G0029554.1 mouse_genomes_project 5 63301753 63307707 + MGP_BALBcJ_P0071837 Lias protein_coding protein_coding MGP_BALBcJ_T0071838.1 MGP_BALBcJ_G0029554.1 mouse_genomes_project 5 63307562 63309939 + Lias protein_coding retained_intron MGP_BALBcJ_T0008024.1 MGP_BALBcJ_G0006550.1 mouse_genomes_project 5 13290982 13300626 - Gm3510 lincRNA lincRNA MGP_BALBcJ_T0008371.1 MGP_BALBcJ_G0006791.1 mouse_genomes_project 5 128241796 128245827 + Gm42495 lincRNA lincRNA MGP_BALBcJ_T0008181.1 MGP_BALBcJ_G0006666.1 mouse_genomes_project 5 90257976 90259976 - Gm43688 lincRNA lincRNA MGP_BALBcJ_T0070332.1 MGP_BALBcJ_G0029301.1 mouse_genomes_project 5 19164711 19183455 + MGP_BALBcJ_P0070332 Psmc2 protein_coding protein_coding MGP_BALBcJ_T0070333.1 MGP_BALBcJ_G0029301.1 mouse_genomes_project 5 19173728 19177856 + Psmc2 protein_coding retained_intron MGP_BALBcJ_T0099980.1 MGP_BALBcJ_G0038016.1 mouse_genomes_project 5 144152355 144152459 + Gm24311 snRNA snRNA MGP_BALBcJ_T0073427.1 MGP_BALBcJ_G0029891.1 mouse_genomes_project 5 112570646 112648362 - MGP_BALBcJ_P0073427 2900026A02Rik protein_coding protein_coding MGP_BALBcJ_T0073428.1 MGP_BALBcJ_G0029891.1 mouse_genomes_project 5 112576726 112622416 - MGP_BALBcJ_P0073428 2900026A02Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0101706.1 MGP_BALBcJ_G0039685.1 mouse_genomes_project 5 20340330 20340893 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0015019.1 MGP_BALBcJ_G0013116.1 mouse_genomes_project 5 77560164 77560182 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001477.1 MGP_BALBcJ_G0001397.1 mouse_genomes_project 5 24733556 24736458 + TEC TEC MGP_BALBcJ_T0004873.1 MGP_BALBcJ_G0004190.1 mouse_genomes_project 5 149950040 150003304 - Gm15997 antisense antisense MGP_BALBcJ_T0004618.1 MGP_BALBcJ_G0004001.1 mouse_genomes_project 5 11858934 11877952 - Gm26918 antisense antisense MGP_BALBcJ_T0070508.1 MGP_BALBcJ_G0029331.1 mouse_genomes_project 5 22203085 22222972 - MGP_BALBcJ_P0070508 Wdr86 protein_coding protein_coding MGP_BALBcJ_T0070509.1 MGP_BALBcJ_G0029331.1 mouse_genomes_project 5 22203612 22222925 - Wdr86 protein_coding retained_intron MGP_BALBcJ_T0070510.1 MGP_BALBcJ_G0029331.1 mouse_genomes_project 5 22203616 22204725 - Wdr86 protein_coding retained_intron MGP_BALBcJ_T0070511.1 MGP_BALBcJ_G0029331.1 mouse_genomes_project 5 22203985 22206929 - MGP_BALBcJ_P0070511 Wdr86 protein_coding protein_coding MGP_BALBcJ_T0073561.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114128451 114165599 - MGP_BALBcJ_P0073561 Trpv4 protein_coding protein_coding MGP_BALBcJ_T0073562.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114128453 114165596 - MGP_BALBcJ_P0073562 Trpv4 protein_coding protein_coding MGP_BALBcJ_T0073563.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114128456 114142979 - Trpv4 protein_coding retained_intron MGP_BALBcJ_T0073564.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114128952 114152237 - MGP_BALBcJ_P0073564 Trpv4 protein_coding protein_coding MGP_BALBcJ_T0073565.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114128952 114152237 - MGP_BALBcJ_P0073565 Trpv4 protein_coding protein_coding MGP_BALBcJ_T0073566.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114128952 114152237 - MGP_BALBcJ_P0073566 Trpv4 protein_coding protein_coding MGP_BALBcJ_T0073567.1 MGP_BALBcJ_G0029917.1 mouse_genomes_project 5 114133491 114137385 - Trpv4 protein_coding retained_intron MGP_BALBcJ_T0099909.1 MGP_BALBcJ_G0037945.1 mouse_genomes_project 5 21924391 21924492 - Gm22333 snRNA snRNA MGP_BALBcJ_T0075481.1 MGP_BALBcJ_G0030265.1 mouse_genomes_project 5 139372073 139408892 - Adap1 protein_coding processed_transcript MGP_BALBcJ_T0075482.1 MGP_BALBcJ_G0030265.1 mouse_genomes_project 5 139372073 139428048 - MGP_BALBcJ_P0075482 Adap1 protein_coding protein_coding MGP_BALBcJ_T0075483.1 MGP_BALBcJ_G0030265.1 mouse_genomes_project 5 139372973 139405671 - Adap1 protein_coding processed_transcript MGP_BALBcJ_T0075484.1 MGP_BALBcJ_G0030265.1 mouse_genomes_project 5 139373055 139408864 - Adap1 protein_coding processed_transcript MGP_BALBcJ_T0075485.1 MGP_BALBcJ_G0030265.1 mouse_genomes_project 5 139373127 139374839 - Adap1 protein_coding retained_intron MGP_BALBcJ_T0075486.1 MGP_BALBcJ_G0030265.1 mouse_genomes_project 5 139381384 139410235 - Adap1 protein_coding retained_intron MGP_BALBcJ_T0073045.1 MGP_BALBcJ_G0029811.1 mouse_genomes_project 5 106301708 106357514 + MGP_BALBcJ_P0073045 protein_coding protein_coding MGP_BALBcJ_T0073046.1 MGP_BALBcJ_G0029811.1 mouse_genomes_project 5 106301724 106321301 + MGP_BALBcJ_P0073046 protein_coding protein_coding MGP_BALBcJ_T0073047.1 MGP_BALBcJ_G0029811.1 mouse_genomes_project 5 106301741 106312628 + protein_coding processed_transcript MGP_BALBcJ_T0073048.1 MGP_BALBcJ_G0029811.1 mouse_genomes_project 5 106339767 106356898 + protein_coding processed_transcript MGP_BALBcJ_T0069980.1 MGP_BALBcJ_G0029242.1 mouse_genomes_project 5 559023 567609 - MGP_BALBcJ_P0069980 Gatad1 protein_coding protein_coding MGP_BALBcJ_T0069984.1 MGP_BALBcJ_G0029242.1 mouse_genomes_project 5 567459 573689 - MGP_BALBcJ_P0069984 Gatad1 protein_coding protein_coding MGP_BALBcJ_T0069985.1 MGP_BALBcJ_G0029242.1 mouse_genomes_project 5 569145 573876 - MGP_BALBcJ_P0069985 Gatad1 protein_coding protein_coding MGP_BALBcJ_T0001436.1 MGP_BALBcJ_G0001357.1 mouse_genomes_project 5 5525717 5528115 - TEC TEC MGP_BALBcJ_T0075190.1 MGP_BALBcJ_G0030203.1 mouse_genomes_project 5 137274038 137299487 + MGP_BALBcJ_P0075190 Ephb4 protein_coding protein_coding MGP_BALBcJ_T0075191.1 MGP_BALBcJ_G0030203.1 mouse_genomes_project 5 137274070 137304571 + MGP_BALBcJ_P0075191 Ephb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0075192.1 MGP_BALBcJ_G0030203.1 mouse_genomes_project 5 137274101 137299481 + MGP_BALBcJ_P0075192 Ephb4 protein_coding protein_coding MGP_BALBcJ_T0075193.1 MGP_BALBcJ_G0030203.1 mouse_genomes_project 5 137274359 137299271 + MGP_BALBcJ_P0075193 Ephb4 protein_coding protein_coding MGP_BALBcJ_T0075194.1 MGP_BALBcJ_G0030203.1 mouse_genomes_project 5 137274442 137299491 + MGP_BALBcJ_P0075194 Ephb4 protein_coding protein_coding MGP_BALBcJ_T0001445.1 MGP_BALBcJ_G0001366.1 mouse_genomes_project 5 9819881 9823500 + TEC TEC MGP_BALBcJ_T0015012.1 MGP_BALBcJ_G0013109.1 mouse_genomes_project 5 74451252 74452326 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0075679.1 MGP_BALBcJ_G0030310.1 mouse_genomes_project 5 143408448 143419553 - MGP_BALBcJ_P0075679 Spdye4a protein_coding protein_coding MGP_BALBcJ_T0075680.1 MGP_BALBcJ_G0030310.1 mouse_genomes_project 5 143408722 143420535 - MGP_BALBcJ_P0075680 Spdye4a protein_coding protein_coding MGP_BALBcJ_T0075681.1 MGP_BALBcJ_G0030310.1 mouse_genomes_project 5 143408830 143420561 - MGP_BALBcJ_P0075681 Spdye4a protein_coding protein_coding MGP_BALBcJ_T0015158.1 MGP_BALBcJ_G0013255.1 mouse_genomes_project 5 140572739 140573213 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018147.1 MGP_BALBcJ_G0015551.1 mouse_genomes_project 5 123192306 123197604 + Gm43813 processed_transcript TEC MGP_BALBcJ_T0018148.1 MGP_BALBcJ_G0015551.1 mouse_genomes_project 5 123192306 123194971 + Gm43813 processed_transcript sense_intronic MGP_BALBcJ_T0071222.1 MGP_BALBcJ_G0029446.1 mouse_genomes_project 5 32333419 32354713 - MGP_BALBcJ_P0071222 Nop14 protein_coding protein_coding MGP_BALBcJ_T0071223.1 MGP_BALBcJ_G0029446.1 mouse_genomes_project 5 32336212 32341574 - MGP_BALBcJ_P0071223 Nop14 protein_coding protein_coding MGP_BALBcJ_T0071224.1 MGP_BALBcJ_G0029446.1 mouse_genomes_project 5 32338389 32342829 - Nop14 protein_coding retained_intron MGP_BALBcJ_T0015191.1 MGP_BALBcJ_G0013288.1 mouse_genomes_project 5 149032409 149032587 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004719.1 MGP_BALBcJ_G0004083.1 mouse_genomes_project 5 95387226 95391062 - Gm42604 antisense antisense MGP_BALBcJ_T0074133.1 MGP_BALBcJ_G0030025.1 mouse_genomes_project 5 122125794 122133590 - MGP_BALBcJ_P0074133 Fam216a protein_coding protein_coding MGP_BALBcJ_T0014963.1 MGP_BALBcJ_G0013060.1 mouse_genomes_project 5 55944317 55944539 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072850.1 MGP_BALBcJ_G0029766.1 mouse_genomes_project 5 99407986 99447955 - MGP_BALBcJ_P0072850 Hpse protein_coding protein_coding MGP_BALBcJ_T0072851.1 MGP_BALBcJ_G0029766.1 mouse_genomes_project 5 99413070 99447944 - MGP_BALBcJ_P0072851 Hpse protein_coding protein_coding MGP_BALBcJ_T0014943.1 MGP_BALBcJ_G0013040.1 mouse_genomes_project 5 46331333 46332698 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072149.1 MGP_BALBcJ_G0029605.1 mouse_genomes_project 5 71595119 71610107 - MGP_BALBcJ_P0072149 Sgcb protein_coding protein_coding MGP_BALBcJ_T0072150.1 MGP_BALBcJ_G0029605.1 mouse_genomes_project 5 71606320 71606783 - Sgcb protein_coding retained_intron MGP_BALBcJ_T0075421.1 MGP_BALBcJ_G0030254.1 mouse_genomes_project 5 138657410 138659473 - MGP_BALBcJ_P0075421 protein_coding protein_coding MGP_BALBcJ_T0074868.1 MGP_BALBcJ_G0030141.1 mouse_genomes_project 5 134578425 134623070 - MGP_BALBcJ_P0074868 Eln protein_coding protein_coding MGP_BALBcJ_T0074869.1 MGP_BALBcJ_G0030141.1 mouse_genomes_project 5 134578670 134601064 - Eln protein_coding retained_intron MGP_BALBcJ_T0074870.1 MGP_BALBcJ_G0030141.1 mouse_genomes_project 5 134578670 134622993 - MGP_BALBcJ_P0074870 Eln protein_coding nonsense_mediated_decay MGP_BALBcJ_T0074871.1 MGP_BALBcJ_G0030141.1 mouse_genomes_project 5 134601366 134604869 - Eln protein_coding retained_intron MGP_BALBcJ_T0074872.1 MGP_BALBcJ_G0030141.1 mouse_genomes_project 5 134620474 134623000 - Eln protein_coding retained_intron MGP_BALBcJ_T0014887.1 MGP_BALBcJ_G0012984.1 mouse_genomes_project 5 22922688 22922938 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0074584.1 MGP_BALBcJ_G0030095.1 mouse_genomes_project 5 127574356 128230145 - MGP_BALBcJ_P0074584 Tmem132d protein_coding protein_coding MGP_BALBcJ_T0074585.1 MGP_BALBcJ_G0030095.1 mouse_genomes_project 5 128062955 128070021 - Tmem132d protein_coding processed_transcript MGP_BALBcJ_T0074586.1 MGP_BALBcJ_G0030095.1 mouse_genomes_project 5 128063060 128069959 - Tmem132d protein_coding processed_transcript MGP_BALBcJ_T0008421.1 MGP_BALBcJ_G0006828.1 mouse_genomes_project 5 147661651 147662195 + Gm27033 lincRNA lincRNA MGP_BALBcJ_T0015136.1 MGP_BALBcJ_G0013233.1 mouse_genomes_project 5 134308143 134308353 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072528.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88568763 88578080 - MGP_BALBcJ_P0072528 Cox18 protein_coding protein_coding MGP_BALBcJ_T0072529.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88568763 88578051 - MGP_BALBcJ_P0072529 Cox18 protein_coding protein_coding MGP_BALBcJ_T0072530.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88568766 88569621 - Cox18 protein_coding processed_transcript MGP_BALBcJ_T0072531.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88568766 88571918 - Cox18 protein_coding retained_intron MGP_BALBcJ_T0072532.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88568769 88570062 - Cox18 protein_coding retained_intron MGP_BALBcJ_T0072533.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88571572 88573831 - Cox18 protein_coding retained_intron MGP_BALBcJ_T0072534.1 MGP_BALBcJ_G0029694.1 mouse_genomes_project 5 88572973 88578018 - MGP_BALBcJ_P0072534 Cox18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0004799.1 MGP_BALBcJ_G0004138.1 mouse_genomes_project 5 122339867 122343229 + Gm43301 antisense antisense MGP_BALBcJ_T0071773.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62035268 62052865 + MGP_BALBcJ_P0071773 Tbc1d1 protein_coding protein_coding MGP_BALBcJ_T0071774.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62038394 62236453 + MGP_BALBcJ_P0071774 Tbc1d1 protein_coding protein_coding MGP_BALBcJ_T0071775.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62038763 62236453 + MGP_BALBcJ_P0071775 Tbc1d1 protein_coding protein_coding MGP_BALBcJ_T0071776.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62039154 62053606 + Tbc1d1 protein_coding retained_intron MGP_BALBcJ_T0071777.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62039154 62236453 + MGP_BALBcJ_P0071777 Tbc1d1 protein_coding protein_coding MGP_BALBcJ_T0071778.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62110542 62236453 + MGP_BALBcJ_P0071778 Tbc1d1 protein_coding protein_coding MGP_BALBcJ_T0071779.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62157316 62166633 + MGP_BALBcJ_P0071779 Tbc1d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0071780.1 MGP_BALBcJ_G0029543.1 mouse_genomes_project 5 62180621 62236448 + Tbc1d1 protein_coding processed_transcript MGP_BALBcJ_T0008144.1 MGP_BALBcJ_G0006635.1 mouse_genomes_project 5 71915781 71917777 + C78283 lincRNA lincRNA MGP_BALBcJ_T0001766.1 MGP_BALBcJ_G0001681.1 mouse_genomes_project 5 113391639 113396136 - TEC TEC MGP_BALBcJ_T0102591.1 MGP_BALBcJ_G0040407.1 mouse_genomes_project 5 151938351 151964636 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0072960.1 MGP_BALBcJ_G0029792.1 mouse_genomes_project 5 103264444 103278705 + MGP_BALBcJ_P0072960 BC005561 protein_coding protein_coding MGP_BALBcJ_T0004874.1 MGP_BALBcJ_G0004191.1 mouse_genomes_project 5 150550325 150566025 - Gm42557 antisense antisense MGP_BALBcJ_T0014849.1 MGP_BALBcJ_G0012946.1 mouse_genomes_project 5 14335634 14336001 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011581.1 MGP_BALBcJ_G0009706.1 mouse_genomes_project 5 99150591 99150770 + Gm27286 misc_RNA misc_RNA MGP_BALBcJ_T0071282.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283496 33314712 + MGP_BALBcJ_P0071282 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071283.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283507 33313518 + MGP_BALBcJ_P0071283 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071284.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283534 33289306 + MGP_BALBcJ_P0071284 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071285.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283535 33316273 + MGP_BALBcJ_P0071285 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071286.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283548 33288001 + Acox3 protein_coding retained_intron MGP_BALBcJ_T0071287.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283558 33312787 + MGP_BALBcJ_P0071287 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071288.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33283979 33312780 + MGP_BALBcJ_P0071288 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071289.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33302546 33309243 + MGP_BALBcJ_P0071289 Acox3 protein_coding protein_coding MGP_BALBcJ_T0071290.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33307862 33310828 + Acox3 protein_coding retained_intron MGP_BALBcJ_T0071291.1 MGP_BALBcJ_G0029458.1 mouse_genomes_project 5 33311007 33312798 + Acox3 protein_coding retained_intron MGP_BALBcJ_T0015156.1 MGP_BALBcJ_G0013253.1 mouse_genomes_project 5 139810799 139811175 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0072139.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71440056 71524230 + MGP_BALBcJ_P0072139 Dcun1d4 protein_coding protein_coding MGP_BALBcJ_T0072140.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71444607 71520721 + Dcun1d4 protein_coding processed_transcript MGP_BALBcJ_T0072141.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71451180 71524230 + MGP_BALBcJ_P0072141 Dcun1d4 protein_coding protein_coding MGP_BALBcJ_T0072142.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71451222 71507359 + MGP_BALBcJ_P0072142 Dcun1d4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072143.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71451278 71492924 + MGP_BALBcJ_P0072143 Dcun1d4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0072144.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71451322 71524223 + MGP_BALBcJ_P0072144 Dcun1d4 protein_coding protein_coding MGP_BALBcJ_T0072145.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71452685 71481088 + Dcun1d4 protein_coding processed_transcript MGP_BALBcJ_T0072146.1 MGP_BALBcJ_G0029603.1 mouse_genomes_project 5 71471877 71496834 + MGP_BALBcJ_P0072146 Dcun1d4 protein_coding protein_coding MGP_BALBcJ_T0072075.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70626482 70683251 - MGP_BALBcJ_P0072075 Txk protein_coding protein_coding MGP_BALBcJ_T0072076.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70626482 70667133 - MGP_BALBcJ_P0072076 Txk protein_coding protein_coding MGP_BALBcJ_T0072077.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70626482 70683255 - MGP_BALBcJ_P0072077 Txk protein_coding protein_coding MGP_BALBcJ_T0072078.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70626484 70683251 - MGP_BALBcJ_P0072078 Txk protein_coding protein_coding MGP_BALBcJ_T0072079.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70626490 70666437 - Txk protein_coding processed_transcript MGP_BALBcJ_T0072080.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70626490 70666437 - Txk protein_coding processed_transcript MGP_BALBcJ_T0072081.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70633942 70683252 - Txk protein_coding retained_intron MGP_BALBcJ_T0072082.1 MGP_BALBcJ_G0029592.1 mouse_genomes_project 5 70679038 70683248 - Txk protein_coding retained_intron MGP_BALBcJ_T0102570.1 MGP_BALBcJ_G0040386.1 mouse_genomes_project 5 85347166 85355483 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0075791.1 MGP_BALBcJ_G0030336.1 mouse_genomes_project 5 144737139 144752186 + MGP_BALBcJ_P0075791 Nptx2 protein_coding protein_coding MGP_BALBcJ_T0001567.1 MGP_BALBcJ_G0001484.1 mouse_genomes_project 5 46686803 46688098 - TEC TEC MGP_BALBcJ_T0073527.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113789684 113865108 + MGP_BALBcJ_P0073527 Myo1h protein_coding protein_coding MGP_BALBcJ_T0073528.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113816322 113864887 + MGP_BALBcJ_P0073528 Myo1h protein_coding protein_coding MGP_BALBcJ_T0073529.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113816322 113866449 + MGP_BALBcJ_P0073529 Myo1h protein_coding protein_coding MGP_BALBcJ_T0073530.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113858695 113866449 + Myo1h protein_coding retained_intron MGP_BALBcJ_T0073531.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113858743 113865193 + Myo1h protein_coding retained_intron MGP_BALBcJ_T0073532.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113858743 113865193 + MGP_BALBcJ_P0073532 Myo1h protein_coding protein_coding MGP_BALBcJ_T0073533.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113858743 113865193 + MGP_BALBcJ_P0073533 Myo1h protein_coding protein_coding MGP_BALBcJ_T0073534.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113858743 113865193 + MGP_BALBcJ_P0073534 Myo1h protein_coding protein_coding MGP_BALBcJ_T0073535.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113859286 113861616 + Myo1h protein_coding retained_intron MGP_BALBcJ_T0073536.1 MGP_BALBcJ_G0029911.1 mouse_genomes_project 5 113865287 113867230 + Myo1h protein_coding processed_transcript MGP_BALBcJ_T0004619.1 MGP_BALBcJ_G0004002.1 mouse_genomes_project 5 12032415 12060490 - Gm26954 antisense antisense MGP_BALBcJ_T0004620.1 MGP_BALBcJ_G0004002.1 mouse_genomes_project 5 12050855 12060475 - Gm26954 antisense antisense MGP_BALBcJ_T0072006.1 MGP_BALBcJ_G0029578.1 mouse_genomes_project 5 67029269 67264028 - MGP_BALBcJ_P0072006 Kctd8 protein_coding protein_coding MGP_BALBcJ_T0072007.1 MGP_BALBcJ_G0029578.1 mouse_genomes_project 5 67218511 67264026 - MGP_BALBcJ_P0072007 Kctd8 protein_coding protein_coding MGP_BALBcJ_T0001627.1 MGP_BALBcJ_G0001543.1 mouse_genomes_project 5 63315775 63316542 + TEC TEC MGP_BALBcJ_T0004857.1 MGP_BALBcJ_G0004179.1 mouse_genomes_project 5 141743615 141759777 - Gm16036 antisense antisense MGP_BALBcJ_T0001574.1 MGP_BALBcJ_G0001491.1 mouse_genomes_project 5 46793442 46797597 - TEC TEC MGP_BALBcJ_T0004738.1 MGP_BALBcJ_G0004093.1 mouse_genomes_project 5 102262680 102282474 - Gm42620 antisense antisense MGP_BALBcJ_T0015002.1 MGP_BALBcJ_G0013099.1 mouse_genomes_project 5 71365200 71366224 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004669.1 MGP_BALBcJ_G0004041.1 mouse_genomes_project 5 41862984 41880167 + Gm42984 antisense antisense MGP_BALBcJ_T0101215.1 MGP_BALBcJ_G0039251.1 mouse_genomes_project 5 97213541 97213672 + Gm24279 snoRNA snoRNA MGP_BALBcJ_T0101917.1 MGP_BALBcJ_G0039798.1 mouse_genomes_project 5 30334001 30338795 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101918.1 MGP_BALBcJ_G0039798.1 mouse_genomes_project 5 30334062 30369180 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101919.1 MGP_BALBcJ_G0039798.1 mouse_genomes_project 5 30334062 30369180 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0075522.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139859938 139884498 - MGP_BALBcJ_P0075522 Ints1 protein_coding protein_coding MGP_BALBcJ_T0075523.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139859941 139863518 - Ints1 protein_coding retained_intron MGP_BALBcJ_T0075524.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139859941 139884463 - MGP_BALBcJ_P0075524 Ints1 protein_coding protein_coding MGP_BALBcJ_T0075525.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139859942 139863638 - MGP_BALBcJ_P0075525 Ints1 protein_coding protein_coding MGP_BALBcJ_T0075526.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139870249 139871172 - Ints1 protein_coding retained_intron MGP_BALBcJ_T0075527.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139874044 139876873 - Ints1 protein_coding retained_intron MGP_BALBcJ_T0075528.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139876072 139884499 - Ints1 protein_coding retained_intron MGP_BALBcJ_T0075529.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139876398 139877429 - Ints1 protein_coding retained_intron MGP_BALBcJ_T0075530.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139878304 139880662 - Ints1 protein_coding retained_intron MGP_BALBcJ_T0075531.1 MGP_BALBcJ_G0030275.1 mouse_genomes_project 5 139881548 139884499 - MGP_BALBcJ_P0075531 Ints1 protein_coding protein_coding MGP_BALBcJ_T0001438.1 MGP_BALBcJ_G0001359.1 mouse_genomes_project 5 5739900 5744858 - TEC TEC MGP_BALBcJ_T0008085.1 MGP_BALBcJ_G0006587.1 mouse_genomes_project 5 36017499 36022317 + 4930487D11Rik lincRNA lincRNA MGP_BALBcJ_T0075649.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143084576 143088440 - MGP_BALBcJ_P0075649 Actb protein_coding protein_coding MGP_BALBcJ_T0075650.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143085340 143088388 - MGP_BALBcJ_P0075650 Actb protein_coding protein_coding MGP_BALBcJ_T0075651.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143086036 143087507 - MGP_BALBcJ_P0075651 Actb protein_coding protein_coding MGP_BALBcJ_T0075652.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143086080 143088411 - Actb protein_coding processed_transcript MGP_BALBcJ_T0075653.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143086357 143088408 - MGP_BALBcJ_P0075653 Actb protein_coding protein_coding MGP_BALBcJ_T0075654.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143086390 143087623 - MGP_BALBcJ_P0075654 Actb protein_coding protein_coding MGP_BALBcJ_T0075655.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143086451 143088358 - Actb protein_coding retained_intron MGP_BALBcJ_T0075656.1 MGP_BALBcJ_G0030305.1 mouse_genomes_project 5 143086558 143088380 - Actb protein_coding retained_intron MGP_BALBcJ_T0008100.1 MGP_BALBcJ_G0006600.1 mouse_genomes_project 5 42520018 42532432 + Gm42750 lincRNA lincRNA MGP_BALBcJ_T0099982.1 MGP_BALBcJ_G0038018.1 mouse_genomes_project 5 151047849 151047950 - Gm23641 snRNA snRNA MGP_BALBcJ_T0074978.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135575935 135638885 + MGP_BALBcJ_P0074978 Por protein_coding protein_coding MGP_BALBcJ_T0074979.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135580474 135590988 + Por protein_coding processed_transcript MGP_BALBcJ_T0074980.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135580478 135638341 + MGP_BALBcJ_P0074980 Por protein_coding protein_coding MGP_BALBcJ_T0074981.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135594975 135642550 + MGP_BALBcJ_P0074981 Por protein_coding protein_coding MGP_BALBcJ_T0074982.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135595097 135642550 + MGP_BALBcJ_P0074982 Por protein_coding protein_coding MGP_BALBcJ_T0074983.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135623078 135639102 + Por protein_coding retained_intron MGP_BALBcJ_T0074984.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135632953 135637465 + MGP_BALBcJ_P0074984 Por protein_coding protein_coding MGP_BALBcJ_T0074985.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135638773 135641139 + Por protein_coding retained_intron MGP_BALBcJ_T0074986.1 MGP_BALBcJ_G0030165.1 mouse_genomes_project 5 135640404 135641271 + Por protein_coding retained_intron MGP_BALBcJ_T0014890.1 MGP_BALBcJ_G0012987.1 mouse_genomes_project 5 23208483 23208844 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011596.1 MGP_BALBcJ_G0009721.1 mouse_genomes_project 5 149704105 149704398 - Gm24105 misc_RNA misc_RNA MGP_BALBcJ_T0099917.1 MGP_BALBcJ_G0037953.1 mouse_genomes_project 5 34343106 34343210 - Gm24878 snRNA snRNA MGP_BALBcJ_T0008132.1 MGP_BALBcJ_G0006626.1 mouse_genomes_project 5 62507848 62509887 - Gm42564 lincRNA lincRNA MGP_BALBcJ_T0072097.1 MGP_BALBcJ_G0029595.1 mouse_genomes_project 5 70918578 70927474 - MGP_BALBcJ_P0072097 Gm10135 protein_coding protein_coding MGP_BALBcJ_T0014984.1 MGP_BALBcJ_G0013081.1 mouse_genomes_project 5 62069416 62070365 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004765.1 MGP_BALBcJ_G0004115.1 mouse_genomes_project 5 114517509 114546901 + Hnf1aos1 antisense antisense MGP_BALBcJ_T0004767.1 MGP_BALBcJ_G0004115.1 mouse_genomes_project 5 114518622 114535089 + Hnf1aos1 antisense antisense MGP_BALBcJ_T0004768.1 MGP_BALBcJ_G0004115.1 mouse_genomes_project 5 114518645 114547094 + Hnf1aos1 antisense antisense MGP_BALBcJ_T0098972.1 MGP_BALBcJ_G0037019.1 mouse_genomes_project 5 115086120 115086840 + Gm13840 sense_intronic sense_intronic MGP_BALBcJ_T0004615.1 MGP_BALBcJ_G0003998.1 mouse_genomes_project 5 5054668 5073576 - Gm15731 antisense antisense MGP_BALBcJ_T0070008.1 MGP_BALBcJ_G0029246.1 mouse_genomes_project 5 769679 793525 + MGP_BALBcJ_P0070008 Lrrd1 protein_coding protein_coding MGP_BALBcJ_T0070009.1 MGP_BALBcJ_G0029246.1 mouse_genomes_project 5 769693 775767 + MGP_BALBcJ_P0070009 Lrrd1 protein_coding protein_coding MGP_BALBcJ_T0074987.1 MGP_BALBcJ_G0030166.1 mouse_genomes_project 5 135642708 135651685 - MGP_BALBcJ_P0074987 Tmem120a protein_coding protein_coding MGP_BALBcJ_T0074988.1 MGP_BALBcJ_G0030166.1 mouse_genomes_project 5 135642727 135643814 - Tmem120a protein_coding retained_intron MGP_BALBcJ_T0074989.1 MGP_BALBcJ_G0030166.1 mouse_genomes_project 5 135642761 135644460 - Tmem120a protein_coding processed_transcript MGP_BALBcJ_T0074990.1 MGP_BALBcJ_G0030166.1 mouse_genomes_project 5 135643478 135649636 - Tmem120a protein_coding retained_intron MGP_BALBcJ_T0074991.1 MGP_BALBcJ_G0030166.1 mouse_genomes_project 5 135644431 135651445 - MGP_BALBcJ_P0074991 Tmem120a protein_coding protein_coding MGP_BALBcJ_T0004777.1 MGP_BALBcJ_G0004123.1 mouse_genomes_project 5 116919431 116920180 - Gm10399 antisense antisense MGP_BALBcJ_T0004778.1 MGP_BALBcJ_G0004123.1 mouse_genomes_project 5 116919679 116920178 - Gm10399 antisense antisense MGP_BALBcJ_T0077445.1 MGP_BALBcJ_G0030692.1 mouse_genomes_project 6 45869860 45878905 + MGP_BALBcJ_P0077445 Gimap5 protein_coding protein_coding MGP_BALBcJ_T0077446.1 MGP_BALBcJ_G0030692.1 mouse_genomes_project 6 45869861 45871156 + Gimap5 protein_coding processed_transcript MGP_BALBcJ_T0077447.1 MGP_BALBcJ_G0030692.1 mouse_genomes_project 6 45869862 45871183 + Gimap5 protein_coding processed_transcript MGP_BALBcJ_T0077448.1 MGP_BALBcJ_G0030692.1 mouse_genomes_project 6 45869962 45872297 + Gimap5 protein_coding retained_intron MGP_BALBcJ_T0077537.1 MGP_BALBcJ_G0030714.1 mouse_genomes_project 6 48610839 48637044 + MGP_BALBcJ_P0077537 Nfe2l3 protein_coding protein_coding MGP_BALBcJ_T0077538.1 MGP_BALBcJ_G0030714.1 mouse_genomes_project 6 48610918 48615077 + Nfe2l3 protein_coding processed_transcript MGP_BALBcJ_T0077539.1 MGP_BALBcJ_G0030714.1 mouse_genomes_project 6 48610918 48635152 + MGP_BALBcJ_P0077539 Nfe2l3 protein_coding protein_coding MGP_BALBcJ_T0015447.1 MGP_BALBcJ_G0013544.1 mouse_genomes_project 6 82952599 82953176 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005049.1 MGP_BALBcJ_G0004310.1 mouse_genomes_project 6 118427693 118428477 + Gm20692 antisense antisense MGP_BALBcJ_T0080547.1 MGP_BALBcJ_G0031364.1 mouse_genomes_project 6 131055890 131056808 - MGP_BALBcJ_P0080547 Tas2r121 protein_coding protein_coding MGP_BALBcJ_T0015426.1 MGP_BALBcJ_G0013523.1 mouse_genomes_project 6 75871987 75873007 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078853.1 MGP_BALBcJ_G0031007.1 mouse_genomes_project 6 87946090 87953908 + MGP_BALBcJ_P0078853 Vmn1r46 protein_coding protein_coding MGP_BALBcJ_T0078854.1 MGP_BALBcJ_G0031007.1 mouse_genomes_project 6 87952951 87953881 + MGP_BALBcJ_P0078854 Vmn1r46 protein_coding protein_coding MGP_BALBcJ_T0005093.1 MGP_BALBcJ_G0004348.1 mouse_genomes_project 6 141992646 142012873 - 1700126G02Rik antisense antisense MGP_BALBcJ_T0015627.1 MGP_BALBcJ_G0013724.1 mouse_genomes_project 6 133836366 133837272 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002655.1 MGP_BALBcJ_G0002540.1 mouse_genomes_project 6 38085226 38085740 + MGP_BALBcJ_P0002655 Trbv12-2 TR_V_gene TR_V_gene MGP_BALBcJ_T0080071.1 MGP_BALBcJ_G0031245.1 mouse_genomes_project 6 122860381 122870008 - MGP_BALBcJ_P0080071 Lrrc23 protein_coding protein_coding MGP_BALBcJ_T0080072.1 MGP_BALBcJ_G0031245.1 mouse_genomes_project 6 122860387 122870017 - MGP_BALBcJ_P0080072 Lrrc23 protein_coding protein_coding MGP_BALBcJ_T0080073.1 MGP_BALBcJ_G0031245.1 mouse_genomes_project 6 122861123 122864897 - Lrrc23 protein_coding retained_intron MGP_BALBcJ_T0080074.1 MGP_BALBcJ_G0031245.1 mouse_genomes_project 6 122868551 122870007 - MGP_BALBcJ_P0080074 Lrrc23 protein_coding protein_coding MGP_BALBcJ_T0080075.1 MGP_BALBcJ_G0031245.1 mouse_genomes_project 6 122869190 122869994 - MGP_BALBcJ_P0080075 Lrrc23 protein_coding protein_coding MGP_BALBcJ_T0100041.1 MGP_BALBcJ_G0038077.1 mouse_genomes_project 6 134978432 134978622 + Gm26105 snRNA snRNA MGP_BALBcJ_T0004964.1 MGP_BALBcJ_G0004260.1 mouse_genomes_project 6 80910647 80913094 - Ccdc142os antisense antisense MGP_BALBcJ_T0004965.1 MGP_BALBcJ_G0004260.1 mouse_genomes_project 6 80910658 80913093 - Ccdc142os antisense antisense MGP_BALBcJ_T0004966.1 MGP_BALBcJ_G0004260.1 mouse_genomes_project 6 80910906 80913027 - Ccdc142os antisense antisense MGP_BALBcJ_T0004967.1 MGP_BALBcJ_G0004260.1 mouse_genomes_project 6 80911786 80913094 - Ccdc142os antisense antisense MGP_BALBcJ_T0002559.1 MGP_BALBcJ_G0002462.1 mouse_genomes_project 6 38514754 38514808 + Trbj1-3 TR_J_gene processed_transcript MGP_BALBcJ_T0002560.1 MGP_BALBcJ_G0002462.1 mouse_genomes_project 6 38514754 38514804 + MGP_BALBcJ_P0002560 Trbj1-3 TR_J_gene TR_J_gene MGP_BALBcJ_T0010743.1 MGP_BALBcJ_G0008868.1 mouse_genomes_project 6 33292288 33292372 + Mir490 miRNA miRNA MGP_BALBcJ_T0011601.1 MGP_BALBcJ_G0009726.1 mouse_genomes_project 6 5157565 5157877 + Gm24059 misc_RNA misc_RNA MGP_BALBcJ_T0077575.1 MGP_BALBcJ_G0030722.1 mouse_genomes_project 6 49363937 49409635 - MGP_BALBcJ_P0077575 Hoxa3 protein_coding protein_coding MGP_BALBcJ_T0077576.1 MGP_BALBcJ_G0030722.1 mouse_genomes_project 6 49367454 49378901 - MGP_BALBcJ_P0077576 Hoxa3 protein_coding protein_coding MGP_BALBcJ_T0077578.1 MGP_BALBcJ_G0030722.1 mouse_genomes_project 6 49375394 49379916 - Hoxa3 protein_coding processed_transcript MGP_BALBcJ_T0077580.1 MGP_BALBcJ_G0030722.1 mouse_genomes_project 6 49395704 49409856 - Hoxa3 protein_coding retained_intron MGP_BALBcJ_T0002118.1 MGP_BALBcJ_G0002031.1 mouse_genomes_project 6 111716031 111716569 + TEC TEC MGP_BALBcJ_T0102655.1 MGP_BALBcJ_G0040470.1 mouse_genomes_project 6 129466242 129467975 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005040.1 MGP_BALBcJ_G0004301.1 mouse_genomes_project 6 111634327 111636455 - Gm44199 antisense antisense MGP_BALBcJ_T0076740.1 MGP_BALBcJ_G0030517.1 mouse_genomes_project 6 27026463 27121066 - MGP_BALBcJ_P0076740 Ube2h protein_coding protein_coding MGP_BALBcJ_T0076741.1 MGP_BALBcJ_G0030517.1 mouse_genomes_project 6 27029977 27059332 - Ube2h protein_coding processed_transcript MGP_BALBcJ_T0076742.1 MGP_BALBcJ_G0030517.1 mouse_genomes_project 6 27030029 27121049 - MGP_BALBcJ_P0076742 Ube2h protein_coding protein_coding MGP_BALBcJ_T0076743.1 MGP_BALBcJ_G0030517.1 mouse_genomes_project 6 27036846 27121055 - Ube2h protein_coding processed_transcript MGP_BALBcJ_T0002163.1 MGP_BALBcJ_G0002075.1 mouse_genomes_project 6 138391266 138392548 - TEC TEC MGP_BALBcJ_T0080371.1 MGP_BALBcJ_G0031302.1 mouse_genomes_project 6 126493999 126525465 + MGP_BALBcJ_P0080371 Gm44596 protein_coding protein_coding MGP_BALBcJ_T0079475.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113263523 113393400 + MGP_BALBcJ_P0079475 Pparg protein_coding protein_coding MGP_BALBcJ_T0079476.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113264864 113393395 + MGP_BALBcJ_P0079476 Pparg protein_coding protein_coding MGP_BALBcJ_T0079477.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113264921 113343512 + MGP_BALBcJ_P0079477 Pparg protein_coding protein_coding MGP_BALBcJ_T0079478.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113264922 113286424 + Pparg protein_coding retained_intron MGP_BALBcJ_T0079479.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113286299 113366366 + MGP_BALBcJ_P0079479 Pparg protein_coding protein_coding MGP_BALBcJ_T0079480.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113324293 113393400 + MGP_BALBcJ_P0079480 Pparg protein_coding protein_coding MGP_BALBcJ_T0079481.1 MGP_BALBcJ_G0031128.1 mouse_genomes_project 6 113341927 113366742 + Pparg protein_coding retained_intron MGP_BALBcJ_T0011643.1 MGP_BALBcJ_G0009768.1 mouse_genomes_project 6 106456397 106456751 + Gm27813 misc_RNA misc_RNA MGP_BALBcJ_T0015212.1 MGP_BALBcJ_G0013309.1 mouse_genomes_project 6 3923598 3924174 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010733.1 MGP_BALBcJ_G0008858.1 mouse_genomes_project 6 26193489 26193578 + Gm26220 miRNA miRNA MGP_BALBcJ_T0015643.1 MGP_BALBcJ_G0013740.1 mouse_genomes_project 6 141915081 141915550 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010732.1 MGP_BALBcJ_G0008857.1 mouse_genomes_project 6 25811620 25811693 + Mir129-1 miRNA miRNA MGP_BALBcJ_T0080407.1 MGP_BALBcJ_G0031311.1 mouse_genomes_project 6 126820850 126835150 + MGP_BALBcJ_P0080407 Clec2h protein_coding protein_coding MGP_BALBcJ_T0080408.1 MGP_BALBcJ_G0031311.1 mouse_genomes_project 6 126820851 126832756 + MGP_BALBcJ_P0080408 Clec2h protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080409.1 MGP_BALBcJ_G0031311.1 mouse_genomes_project 6 126820852 126832547 + MGP_BALBcJ_P0080409 Clec2h protein_coding protein_coding MGP_BALBcJ_T0080410.1 MGP_BALBcJ_G0031311.1 mouse_genomes_project 6 126820856 126832749 + Clec2h protein_coding retained_intron MGP_BALBcJ_T0015660.1 MGP_BALBcJ_G0013757.1 mouse_genomes_project 6 148169890 148170762 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099993.1 MGP_BALBcJ_G0038029.1 mouse_genomes_project 6 26285710 26285816 - Gm26484 snRNA snRNA MGP_BALBcJ_T0015315.1 MGP_BALBcJ_G0013412.1 mouse_genomes_project 6 46305171 46305373 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080335.1 MGP_BALBcJ_G0031295.1 mouse_genomes_project 6 125974981 126043124 + MGP_BALBcJ_P0080335 Tspan11 protein_coding protein_coding MGP_BALBcJ_T0080336.1 MGP_BALBcJ_G0031295.1 mouse_genomes_project 6 125975166 126012565 + Tspan11 protein_coding retained_intron MGP_BALBcJ_T0001925.1 MGP_BALBcJ_G0001838.1 mouse_genomes_project 6 15171439 15173026 - TEC TEC MGP_BALBcJ_T0077429.1 MGP_BALBcJ_G0030688.1 mouse_genomes_project 6 45825041 45831674 - MGP_BALBcJ_P0077429 Gimap6 protein_coding protein_coding MGP_BALBcJ_T0077430.1 MGP_BALBcJ_G0030688.1 mouse_genomes_project 6 45825042 45831662 - MGP_BALBcJ_P0077430 Gimap6 protein_coding protein_coding MGP_BALBcJ_T0077431.1 MGP_BALBcJ_G0030688.1 mouse_genomes_project 6 45827204 45831645 - MGP_BALBcJ_P0077431 Gimap6 protein_coding protein_coding MGP_BALBcJ_T0077432.1 MGP_BALBcJ_G0030688.1 mouse_genomes_project 6 45827892 45829708 - Gimap6 protein_coding processed_transcript MGP_BALBcJ_T0004963.1 MGP_BALBcJ_G0004259.1 mouse_genomes_project 6 80563697 80566704 + Gm17034 antisense antisense MGP_BALBcJ_T0001993.1 MGP_BALBcJ_G0001906.1 mouse_genomes_project 6 56363986 56366081 + TEC TEC MGP_BALBcJ_T0077593.1 MGP_BALBcJ_G0030729.1 mouse_genomes_project 6 49427676 49431419 - MGP_BALBcJ_P0077593 Hoxa10 protein_coding protein_coding MGP_BALBcJ_T0077594.1 MGP_BALBcJ_G0030729.1 mouse_genomes_project 6 49427678 49429804 - Hoxa10 protein_coding processed_transcript MGP_BALBcJ_T0077595.1 MGP_BALBcJ_G0030729.1 mouse_genomes_project 6 49428401 49437326 - MGP_BALBcJ_P0077595 Hoxa10 protein_coding protein_coding MGP_BALBcJ_T0077596.1 MGP_BALBcJ_G0030729.1 mouse_genomes_project 6 49428561 49437267 - Hoxa10 protein_coding processed_transcript MGP_BALBcJ_T0080392.1 MGP_BALBcJ_G0031306.1 mouse_genomes_project 6 126604041 126648090 - MGP_BALBcJ_P0080392 Pzp protein_coding protein_coding MGP_BALBcJ_T0080393.1 MGP_BALBcJ_G0031306.1 mouse_genomes_project 6 126605765 126608051 - Pzp protein_coding processed_transcript MGP_BALBcJ_T0080394.1 MGP_BALBcJ_G0031306.1 mouse_genomes_project 6 126614437 126616313 - Pzp protein_coding retained_intron MGP_BALBcJ_T0080395.1 MGP_BALBcJ_G0031306.1 mouse_genomes_project 6 126642538 126648073 - MGP_BALBcJ_P0080395 Pzp protein_coding protein_coding MGP_BALBcJ_T0077449.1 MGP_BALBcJ_G0030693.1 mouse_genomes_project 6 45888687 45897141 - MGP_BALBcJ_P0077449 Gimap3 protein_coding protein_coding MGP_BALBcJ_T0077450.1 MGP_BALBcJ_G0030693.1 mouse_genomes_project 6 45888689 45891183 - MGP_BALBcJ_P0077450 Gimap3 protein_coding protein_coding MGP_BALBcJ_T0081060.1 MGP_BALBcJ_G0031477.1 mouse_genomes_project 6 145714443 145718536 - MGP_BALBcJ_P0081060 1700034J05Rik protein_coding protein_coding MGP_BALBcJ_T0081061.1 MGP_BALBcJ_G0031477.1 mouse_genomes_project 6 145715414 145718528 - MGP_BALBcJ_P0081061 1700034J05Rik protein_coding protein_coding MGP_BALBcJ_T0080115.1 MGP_BALBcJ_G0031253.1 mouse_genomes_project 6 122951279 123000174 - MGP_BALBcJ_P0080115 Cd4 protein_coding unknown_likely_coding MGP_BALBcJ_T0080116.1 MGP_BALBcJ_G0031253.1 mouse_genomes_project 6 122951283 122974809 - MGP_BALBcJ_P0080116 Cd4 protein_coding protein_coding MGP_BALBcJ_T0080117.1 MGP_BALBcJ_G0031253.1 mouse_genomes_project 6 122953212 122956861 - Cd4 protein_coding processed_transcript MGP_BALBcJ_T0080118.1 MGP_BALBcJ_G0031253.1 mouse_genomes_project 6 122953312 122957078 - Cd4 protein_coding processed_transcript MGP_BALBcJ_T0080119.1 MGP_BALBcJ_G0031253.1 mouse_genomes_project 6 122953917 122974787 - Cd4 protein_coding retained_intron MGP_BALBcJ_T0080120.1 MGP_BALBcJ_G0031253.1 mouse_genomes_project 6 122965324 122974788 - Cd4 protein_coding retained_intron MGP_BALBcJ_T0079126.1 MGP_BALBcJ_G0031063.1 mouse_genomes_project 6 97748908 97751296 + MGP_BALBcJ_P0079126 Gpr27 protein_coding protein_coding MGP_BALBcJ_T0005039.1 MGP_BALBcJ_G0004300.1 mouse_genomes_project 6 111330276 111348788 - Gm15492 antisense antisense MGP_BALBcJ_T0002658.1 MGP_BALBcJ_G0002543.1 mouse_genomes_project 6 38099711 38100183 + MGP_BALBcJ_P0002658 Trbv14 TR_V_gene TR_V_gene MGP_BALBcJ_T0076228.1 MGP_BALBcJ_G0030418.1 mouse_genomes_project 6 2216546 2229983 - MGP_BALBcJ_P0076228 Pdk4 protein_coding protein_coding MGP_BALBcJ_T0076229.1 MGP_BALBcJ_G0030418.1 mouse_genomes_project 6 2224782 2229935 - MGP_BALBcJ_P0076229 Pdk4 protein_coding protein_coding MGP_BALBcJ_T0076230.1 MGP_BALBcJ_G0030418.1 mouse_genomes_project 6 2228054 2229949 - Pdk4 protein_coding retained_intron MGP_BALBcJ_T0015433.1 MGP_BALBcJ_G0013530.1 mouse_genomes_project 6 80039393 80040065 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076143.1 MGP_BALBcJ_G0030402.1 mouse_genomes_project 6 166681 204399 - MGP_BALBcJ_P0076143 Hepacam2 protein_coding protein_coding MGP_BALBcJ_T0076144.1 MGP_BALBcJ_G0030402.1 mouse_genomes_project 6 166980 197223 - Hepacam2 protein_coding retained_intron MGP_BALBcJ_T0076145.1 MGP_BALBcJ_G0030402.1 mouse_genomes_project 6 185885 197237 - MGP_BALBcJ_P0076145 Hepacam2 protein_coding protein_coding MGP_BALBcJ_T0076146.1 MGP_BALBcJ_G0030402.1 mouse_genomes_project 6 193127 208099 - MGP_BALBcJ_P0076146 Hepacam2 protein_coding protein_coding MGP_BALBcJ_T0076147.1 MGP_BALBcJ_G0030402.1 mouse_genomes_project 6 193414 197204 - Hepacam2 protein_coding retained_intron MGP_BALBcJ_T0079365.1 MGP_BALBcJ_G0031108.1 mouse_genomes_project 6 111516742 111525049 - MGP_BALBcJ_P0079365 Prrt3 protein_coding protein_coding MGP_BALBcJ_T0079366.1 MGP_BALBcJ_G0031108.1 mouse_genomes_project 6 111517028 111525097 - MGP_BALBcJ_P0079366 Prrt3 protein_coding protein_coding MGP_BALBcJ_T0079367.1 MGP_BALBcJ_G0031108.1 mouse_genomes_project 6 111517198 111524984 - MGP_BALBcJ_P0079367 Prrt3 protein_coding protein_coding MGP_BALBcJ_T0079368.1 MGP_BALBcJ_G0031108.1 mouse_genomes_project 6 111519371 111525053 - MGP_BALBcJ_P0079368 Prrt3 protein_coding protein_coding MGP_BALBcJ_T0079369.1 MGP_BALBcJ_G0031108.1 mouse_genomes_project 6 111519403 111525059 - MGP_BALBcJ_P0079369 Prrt3 protein_coding protein_coding MGP_BALBcJ_T0000176.1 MGP_BALBcJ_G0000134.1 mouse_genomes_project 6 67651172 67651635 - MGP_BALBcJ_P0000176 Igkv12-38 IG_V_gene IG_V_gene MGP_BALBcJ_T0000177.1 MGP_BALBcJ_G0000134.1 mouse_genomes_project 6 67651172 67651635 - MGP_BALBcJ_P0000177 Igkv12-38 IG_V_gene IG_V_gene MGP_BALBcJ_T0079487.1 MGP_BALBcJ_G0031130.1 mouse_genomes_project 6 113486770 113496035 - MGP_BALBcJ_P0079487 Mkrn2os protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079488.1 MGP_BALBcJ_G0031130.1 mouse_genomes_project 6 113488348 113496062 - MGP_BALBcJ_P0079488 Mkrn2os protein_coding protein_coding MGP_BALBcJ_T0004907.1 MGP_BALBcJ_G0004216.1 mouse_genomes_project 6 31599467 31599702 - Npn2 antisense antisense MGP_BALBcJ_T0004908.1 MGP_BALBcJ_G0004216.1 mouse_genomes_project 6 31599626 31599701 - Npn2 antisense antisense MGP_BALBcJ_T0008471.1 MGP_BALBcJ_G0006863.1 mouse_genomes_project 6 2976844 3009036 + Gm20619 lincRNA lincRNA MGP_BALBcJ_T0008472.1 MGP_BALBcJ_G0006863.1 mouse_genomes_project 6 2976872 3093086 + Gm20619 lincRNA lincRNA MGP_BALBcJ_T0008473.1 MGP_BALBcJ_G0006863.1 mouse_genomes_project 6 2976875 3107731 + Gm20619 lincRNA lincRNA MGP_BALBcJ_T0008474.1 MGP_BALBcJ_G0006863.1 mouse_genomes_project 6 2976903 3009032 + Gm20619 lincRNA lincRNA MGP_BALBcJ_T0008475.1 MGP_BALBcJ_G0006863.1 mouse_genomes_project 6 3026814 3092881 + Gm20619 lincRNA lincRNA MGP_BALBcJ_T0079188.1 MGP_BALBcJ_G0031078.1 mouse_genomes_project 6 106067970 106088887 + MGP_BALBcJ_P0079188 Setmar protein_coding protein_coding MGP_BALBcJ_T0079189.1 MGP_BALBcJ_G0031078.1 mouse_genomes_project 6 106067987 106088887 + MGP_BALBcJ_P0079189 Setmar protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102667.1 MGP_BALBcJ_G0040482.1 mouse_genomes_project 6 131754167 131755801 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000289.1 MGP_BALBcJ_G0000230.1 mouse_genomes_project 6 66179903 66180362 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008758.1 MGP_BALBcJ_G0007072.1 mouse_genomes_project 6 146013130 146014397 - Gm15767 lincRNA lincRNA MGP_BALBcJ_T0008759.1 MGP_BALBcJ_G0007072.1 mouse_genomes_project 6 146013326 146014389 - Gm15767 lincRNA lincRNA MGP_BALBcJ_T0002010.1 MGP_BALBcJ_G0001923.1 mouse_genomes_project 6 70408555 70409836 + TEC TEC MGP_BALBcJ_T0080887.1 MGP_BALBcJ_G0031449.1 mouse_genomes_project 6 141345312 141352287 - MGP_BALBcJ_P0080887 Kcnj8 protein_coding protein_coding MGP_BALBcJ_T0080888.1 MGP_BALBcJ_G0031449.1 mouse_genomes_project 6 141345314 141352044 - MGP_BALBcJ_P0080888 Kcnj8 protein_coding protein_coding MGP_BALBcJ_T0101245.1 MGP_BALBcJ_G0039281.1 mouse_genomes_project 6 32834276 32834411 + Gm23273 snoRNA snoRNA MGP_BALBcJ_T0015506.1 MGP_BALBcJ_G0013603.1 mouse_genomes_project 6 107203359 107203944 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076499.1 MGP_BALBcJ_G0030469.1 mouse_genomes_project 6 19837700 19898839 - MGP_BALBcJ_P0076499 Aass protein_coding protein_coding MGP_BALBcJ_T0076500.1 MGP_BALBcJ_G0030469.1 mouse_genomes_project 6 19857650 19893430 - Aass protein_coding processed_transcript MGP_BALBcJ_T0076501.1 MGP_BALBcJ_G0030469.1 mouse_genomes_project 6 19857650 19893462 - MGP_BALBcJ_P0076501 Aass protein_coding protein_coding MGP_BALBcJ_T0076502.1 MGP_BALBcJ_G0030469.1 mouse_genomes_project 6 19874670 19898769 - Aass protein_coding processed_transcript MGP_BALBcJ_T0000140.1 MGP_BALBcJ_G0000107.1 mouse_genomes_project 6 65812197 65812923 + MGP_BALBcJ_P0000140 Igkv2-112 IG_V_gene IG_V_gene MGP_BALBcJ_T0000141.1 MGP_BALBcJ_G0000107.1 mouse_genomes_project 6 65812197 65812923 + MGP_BALBcJ_P0000141 Igkv2-112 IG_V_gene IG_V_gene MGP_BALBcJ_T0001969.1 MGP_BALBcJ_G0001882.1 mouse_genomes_project 6 43118374 43122311 + TEC TEC MGP_BALBcJ_T0015339.1 MGP_BALBcJ_G0013436.1 mouse_genomes_project 6 55799047 55799477 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078840.1 MGP_BALBcJ_G0030999.1 mouse_genomes_project 6 87352183 87560711 - MGP_BALBcJ_P0078840 Chchd6 protein_coding protein_coding MGP_BALBcJ_T0078841.1 MGP_BALBcJ_G0030999.1 mouse_genomes_project 6 87352188 87560711 - MGP_BALBcJ_P0078841 Chchd6 protein_coding protein_coding MGP_BALBcJ_T0078842.1 MGP_BALBcJ_G0030999.1 mouse_genomes_project 6 87387121 87560663 - Chchd6 protein_coding retained_intron MGP_BALBcJ_T0078843.1 MGP_BALBcJ_G0030999.1 mouse_genomes_project 6 87534594 87560670 - MGP_BALBcJ_P0078843 Chchd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015281.1 MGP_BALBcJ_G0013378.1 mouse_genomes_project 6 36808726 36809810 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015618.1 MGP_BALBcJ_G0013715.1 mouse_genomes_project 6 131321978 131322355 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080738.1 MGP_BALBcJ_G0031419.1 mouse_genomes_project 6 136531287 136548547 + MGP_BALBcJ_P0080738 Strap protein_coding protein_coding MGP_BALBcJ_T0080739.1 MGP_BALBcJ_G0031419.1 mouse_genomes_project 6 136541223 136545368 + Strap protein_coding processed_transcript MGP_BALBcJ_T0080740.1 MGP_BALBcJ_G0031419.1 mouse_genomes_project 6 136545839 136547291 + Strap protein_coding retained_intron MGP_BALBcJ_T0079929.1 MGP_BALBcJ_G0031208.1 mouse_genomes_project 6 120635737 120640416 - MGP_BALBcJ_P0079929 Gdf3 protein_coding protein_coding MGP_BALBcJ_T0079930.1 MGP_BALBcJ_G0031208.1 mouse_genomes_project 6 120638355 120640153 - Gdf3 protein_coding processed_transcript MGP_BALBcJ_T0101258.1 MGP_BALBcJ_G0039294.1 mouse_genomes_project 6 55149014 55149143 - Gm25726 snoRNA snoRNA MGP_BALBcJ_T0077246.1 MGP_BALBcJ_G0030635.1 mouse_genomes_project 6 39421427 39422357 + MGP_BALBcJ_P0077246 Tas2r126 protein_coding protein_coding MGP_BALBcJ_T0079224.1 MGP_BALBcJ_G0031086.1 mouse_genomes_project 6 110379396 110407740 - MGP_BALBcJ_P0079224 Ssu2 protein_coding protein_coding MGP_BALBcJ_T0079225.1 MGP_BALBcJ_G0031086.1 mouse_genomes_project 6 110388654 110397456 - Ssu2 protein_coding processed_transcript MGP_BALBcJ_T0079226.1 MGP_BALBcJ_G0031086.1 mouse_genomes_project 6 110389189 110395477 - Ssu2 protein_coding retained_intron MGP_BALBcJ_T0079227.1 MGP_BALBcJ_G0031086.1 mouse_genomes_project 6 110389610 110407716 - MGP_BALBcJ_P0079227 Ssu2 protein_coding unknown_likely_coding MGP_BALBcJ_T0015470.1 MGP_BALBcJ_G0013567.1 mouse_genomes_project 6 92475851 92476267 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076327.1 MGP_BALBcJ_G0030440.1 mouse_genomes_project 6 9836863 9920780 - MGP_BALBcJ_P0076327 protein_coding protein_coding MGP_BALBcJ_T0076328.1 MGP_BALBcJ_G0030440.1 mouse_genomes_project 6 9858838 9861645 - protein_coding retained_intron MGP_BALBcJ_T0076329.1 MGP_BALBcJ_G0030440.1 mouse_genomes_project 6 9870413 9920780 - MGP_BALBcJ_P0076329 protein_coding protein_coding MGP_BALBcJ_T0076330.1 MGP_BALBcJ_G0030440.1 mouse_genomes_project 6 9880718 9903575 - protein_coding retained_intron MGP_BALBcJ_T0002129.1 MGP_BALBcJ_G0002041.1 mouse_genomes_project 6 118494300 118494772 - TEC TEC MGP_BALBcJ_T0000139.1 MGP_BALBcJ_G0000106.1 mouse_genomes_project 6 65585686 65586457 + MGP_BALBcJ_P0000139 Igkv1-122 IG_V_gene IG_V_gene MGP_BALBcJ_T0008541.1 MGP_BALBcJ_G0006909.1 mouse_genomes_project 6 32215780 32221749 + 1700065J11Rik lincRNA lincRNA MGP_BALBcJ_T0080961.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143970030 144000352 - Casc1 protein_coding retained_intron MGP_BALBcJ_T0080962.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143970030 144006074 - MGP_BALBcJ_P0080962 Casc1 protein_coding protein_coding MGP_BALBcJ_T0080963.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143970030 144005895 - MGP_BALBcJ_P0080963 Casc1 protein_coding protein_coding MGP_BALBcJ_T0080964.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143970138 144005978 - MGP_BALBcJ_P0080964 Casc1 protein_coding protein_coding MGP_BALBcJ_T0080965.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143985345 144006003 - Casc1 protein_coding retained_intron MGP_BALBcJ_T0080966.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143988059 144005973 - Casc1 protein_coding processed_transcript MGP_BALBcJ_T0080967.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143997890 144005983 - Casc1 protein_coding retained_intron MGP_BALBcJ_T0080968.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 143999272 144006013 - Casc1 protein_coding retained_intron MGP_BALBcJ_T0080969.1 MGP_BALBcJ_G0031459.1 mouse_genomes_project 6 144003090 144006109 - Casc1 protein_coding retained_intron MGP_BALBcJ_T0099006.1 MGP_BALBcJ_G0037049.1 mouse_genomes_project 6 143468229 143470523 - Sox5it sense_intronic sense_intronic MGP_BALBcJ_T0080549.1 MGP_BALBcJ_G0031366.1 mouse_genomes_project 6 131094411 131095445 - MGP_BALBcJ_P0080549 Tas2r115 protein_coding protein_coding MGP_BALBcJ_T0015446.1 MGP_BALBcJ_G0013543.1 mouse_genomes_project 6 82943719 82944476 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102649.1 MGP_BALBcJ_G0040464.1 mouse_genomes_project 6 127115843 127115957 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0076755.1 MGP_BALBcJ_G0030519.1 mouse_genomes_project 6 27219396 27271363 + MGP_BALBcJ_P0076755 Klhdc10 protein_coding protein_coding MGP_BALBcJ_T0076756.1 MGP_BALBcJ_G0030519.1 mouse_genomes_project 6 27219522 27273259 + MGP_BALBcJ_P0076756 Klhdc10 protein_coding protein_coding MGP_BALBcJ_T0076757.1 MGP_BALBcJ_G0030519.1 mouse_genomes_project 6 27219526 27268637 + MGP_BALBcJ_P0076757 Klhdc10 protein_coding protein_coding MGP_BALBcJ_T0076758.1 MGP_BALBcJ_G0030519.1 mouse_genomes_project 6 27235123 27265522 + MGP_BALBcJ_P0076758 Klhdc10 protein_coding protein_coding MGP_BALBcJ_T0076759.1 MGP_BALBcJ_G0030519.1 mouse_genomes_project 6 27261840 27268916 + Klhdc10 protein_coding retained_intron MGP_BALBcJ_T0008654.1 MGP_BALBcJ_G0006992.1 mouse_genomes_project 6 89108644 89109756 - Gm44278 lincRNA lincRNA MGP_BALBcJ_T0080233.1 MGP_BALBcJ_G0031271.1 mouse_genomes_project 6 123315946 123320299 - MGP_BALBcJ_P0080233 Cd27 protein_coding protein_coding MGP_BALBcJ_T0080234.1 MGP_BALBcJ_G0031271.1 mouse_genomes_project 6 123316447 123320283 - MGP_BALBcJ_P0080234 Cd27 protein_coding protein_coding MGP_BALBcJ_T0080235.1 MGP_BALBcJ_G0031271.1 mouse_genomes_project 6 123316518 123320242 - MGP_BALBcJ_P0080235 Cd27 protein_coding protein_coding MGP_BALBcJ_T0080236.1 MGP_BALBcJ_G0031271.1 mouse_genomes_project 6 123316852 123318111 - Cd27 protein_coding retained_intron MGP_BALBcJ_T0080237.1 MGP_BALBcJ_G0031271.1 mouse_genomes_project 6 123316988 123317971 - Cd27 protein_coding retained_intron MGP_BALBcJ_T0080238.1 MGP_BALBcJ_G0031271.1 mouse_genomes_project 6 123319397 123320292 - Cd27 protein_coding retained_intron MGP_BALBcJ_T0076984.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34767817 34818470 + Trim24 protein_coding retained_intron MGP_BALBcJ_T0076985.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34767817 34848136 + Trim24 protein_coding retained_intron MGP_BALBcJ_T0076986.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34767817 34867393 + MGP_BALBcJ_P0076986 Trim24 protein_coding protein_coding MGP_BALBcJ_T0076987.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34767817 34867393 + MGP_BALBcJ_P0076987 Trim24 protein_coding protein_coding MGP_BALBcJ_T0076988.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34773336 34832900 + Trim24 protein_coding processed_transcript MGP_BALBcJ_T0076989.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34797390 34867029 + MGP_BALBcJ_P0076989 Trim24 protein_coding protein_coding MGP_BALBcJ_T0076990.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34812124 34829467 + Trim24 protein_coding retained_intron MGP_BALBcJ_T0076991.1 MGP_BALBcJ_G0030561.1 mouse_genomes_project 6 34849895 34854811 + Trim24 protein_coding retained_intron MGP_BALBcJ_T0015487.1 MGP_BALBcJ_G0013584.1 mouse_genomes_project 6 98927574 98946064 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015217.1 MGP_BALBcJ_G0013314.1 mouse_genomes_project 6 4581984 4582174 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076869.1 MGP_BALBcJ_G0030539.1 mouse_genomes_project 6 31177747 31182767 - Akr1b3 protein_coding retained_intron MGP_BALBcJ_T0076870.1 MGP_BALBcJ_G0030539.1 mouse_genomes_project 6 31179247 31181997 - Akr1b3 protein_coding retained_intron MGP_BALBcJ_T0076871.1 MGP_BALBcJ_G0030539.1 mouse_genomes_project 6 31179247 31192788 - MGP_BALBcJ_P0076871 Akr1b3 protein_coding protein_coding MGP_BALBcJ_T0076872.1 MGP_BALBcJ_G0030539.1 mouse_genomes_project 6 31182932 31192751 - Akr1b3 protein_coding retained_intron MGP_BALBcJ_T0076873.1 MGP_BALBcJ_G0030539.1 mouse_genomes_project 6 31185102 31192740 - Akr1b3 protein_coding retained_intron MGP_BALBcJ_T0076874.1 MGP_BALBcJ_G0030539.1 mouse_genomes_project 6 31185914 31192769 - MGP_BALBcJ_P0076874 Akr1b3 protein_coding protein_coding MGP_BALBcJ_T0010777.1 MGP_BALBcJ_G0008902.1 mouse_genomes_project 6 105465887 105466013 - Gm27690 miRNA miRNA MGP_BALBcJ_T0080835.1 MGP_BALBcJ_G0031435.1 mouse_genomes_project 6 140429189 140488931 + MGP_BALBcJ_P0080835 Slco1b2 protein_coding protein_coding MGP_BALBcJ_T0080836.1 MGP_BALBcJ_G0031435.1 mouse_genomes_project 6 140434031 140487891 + MGP_BALBcJ_P0080836 Slco1b2 protein_coding protein_coding MGP_BALBcJ_T0080837.1 MGP_BALBcJ_G0031435.1 mouse_genomes_project 6 140451526 140456144 + Slco1b2 protein_coding retained_intron MGP_BALBcJ_T0080838.1 MGP_BALBcJ_G0031435.1 mouse_genomes_project 6 140481504 140487894 + Slco1b2 protein_coding retained_intron MGP_BALBcJ_T0002557.1 MGP_BALBcJ_G0002460.1 mouse_genomes_project 6 38514295 38514343 + MGP_BALBcJ_P0002557 Trbj1-1 TR_J_gene TR_J_gene MGP_BALBcJ_T0001957.1 MGP_BALBcJ_G0001870.1 mouse_genomes_project 6 42188995 42191208 + TEC TEC MGP_BALBcJ_T0079343.1 MGP_BALBcJ_G0031104.1 mouse_genomes_project 6 111465408 111471069 + MGP_BALBcJ_P0079343 Jagn1 protein_coding protein_coding MGP_BALBcJ_T0079344.1 MGP_BALBcJ_G0031104.1 mouse_genomes_project 6 111465434 111467848 + Jagn1 protein_coding retained_intron MGP_BALBcJ_T0079345.1 MGP_BALBcJ_G0031104.1 mouse_genomes_project 6 111465449 111471049 + MGP_BALBcJ_P0079345 Jagn1 protein_coding protein_coding MGP_BALBcJ_T0015357.1 MGP_BALBcJ_G0013454.1 mouse_genomes_project 6 62373937 62374607 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080541.1 MGP_BALBcJ_G0031359.1 mouse_genomes_project 6 130069038 130069968 - MGP_BALBcJ_P0080541 Tas2r114 protein_coding protein_coding MGP_BALBcJ_T0010782.1 MGP_BALBcJ_G0008907.1 mouse_genomes_project 6 113000979 113001074 + Gm24767 miRNA miRNA MGP_BALBcJ_T0077115.1 MGP_BALBcJ_G0030587.1 mouse_genomes_project 6 36838599 37215703 + MGP_BALBcJ_P0077115 Tmem178b protein_coding protein_coding MGP_BALBcJ_T0077116.1 MGP_BALBcJ_G0030587.1 mouse_genomes_project 6 37071136 37209065 + MGP_BALBcJ_P0077116 Tmem178b protein_coding protein_coding MGP_BALBcJ_T0077117.1 MGP_BALBcJ_G0030587.1 mouse_genomes_project 6 37209528 37215778 + Tmem178b protein_coding retained_intron MGP_BALBcJ_T0001927.1 MGP_BALBcJ_G0001840.1 mouse_genomes_project 6 18436924 18441003 + TEC TEC MGP_BALBcJ_T0015611.1 MGP_BALBcJ_G0013708.1 mouse_genomes_project 6 130742370 130742587 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015348.1 MGP_BALBcJ_G0013445.1 mouse_genomes_project 6 58900044 58900468 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010800.1 MGP_BALBcJ_G0008925.1 mouse_genomes_project 6 127902707 127902816 + Mir680-1 miRNA miRNA MGP_BALBcJ_T0004951.1 MGP_BALBcJ_G0004250.1 mouse_genomes_project 6 69290247 69291170 - 1700040L08Rik antisense antisense MGP_BALBcJ_T0101287.1 MGP_BALBcJ_G0039323.1 mouse_genomes_project 6 116002001 116002133 - Gm23908 snoRNA snoRNA MGP_BALBcJ_T0015601.1 MGP_BALBcJ_G0013698.1 mouse_genomes_project 6 129098933 129099120 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002042.1 MGP_BALBcJ_G0001955.1 mouse_genomes_project 6 84159413 84161773 - TEC TEC MGP_BALBcJ_T0079775.1 MGP_BALBcJ_G0031179.1 mouse_genomes_project 6 118003996 118106860 + MGP_BALBcJ_P0079775 Ninj2 protein_coding protein_coding MGP_BALBcJ_T0079776.1 MGP_BALBcJ_G0031179.1 mouse_genomes_project 6 118100343 118106855 + MGP_BALBcJ_P0079776 Ninj2 protein_coding protein_coding MGP_BALBcJ_T0000181.1 MGP_BALBcJ_G0000137.1 mouse_genomes_project 6 67719540 67720265 - MGP_BALBcJ_P0000181 Igkv1-35 IG_V_gene IG_V_gene MGP_BALBcJ_T0000182.1 MGP_BALBcJ_G0000137.1 mouse_genomes_project 6 67719540 67720265 - MGP_BALBcJ_P0000182 Igkv1-35 IG_V_gene IG_V_gene MGP_BALBcJ_T0008755.1 MGP_BALBcJ_G0007070.1 mouse_genomes_project 6 145420223 145428838 + 4930479D17Rik lincRNA lincRNA MGP_BALBcJ_T0079489.1 MGP_BALBcJ_G0031131.1 mouse_genomes_project 6 113505527 113526248 + MGP_BALBcJ_P0079489 Mkrn2 protein_coding protein_coding MGP_BALBcJ_T0079490.1 MGP_BALBcJ_G0031131.1 mouse_genomes_project 6 113505607 113517009 + Mkrn2 protein_coding processed_transcript MGP_BALBcJ_T0079491.1 MGP_BALBcJ_G0031131.1 mouse_genomes_project 6 113514942 113515988 + Mkrn2 protein_coding retained_intron MGP_BALBcJ_T0004926.1 MGP_BALBcJ_G0004232.1 mouse_genomes_project 6 46120539 46132591 - 4930563H07Rik antisense antisense MGP_BALBcJ_T0077772.1 MGP_BALBcJ_G0030771.1 mouse_genomes_project 6 54305268 54306423 + MGP_BALBcJ_P0077772 protein_coding protein_coding MGP_BALBcJ_T0005110.1 MGP_BALBcJ_G0004363.1 mouse_genomes_project 6 147702425 147704677 + 3010003L21Rik antisense antisense MGP_BALBcJ_T0005111.1 MGP_BALBcJ_G0004363.1 mouse_genomes_project 6 147702425 147704685 + 3010003L21Rik antisense antisense MGP_BALBcJ_T0076661.1 MGP_BALBcJ_G0030508.1 mouse_genomes_project 6 26269448 26271477 + MGP_BALBcJ_P0076661 Gm9047 protein_coding protein_coding MGP_BALBcJ_T0078804.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86816897 86832165 - MGP_BALBcJ_P0078804 Mcm2 protein_coding protein_coding MGP_BALBcJ_T0078805.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86821856 86825350 - Mcm2 protein_coding retained_intron MGP_BALBcJ_T0078806.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86823316 86826620 - MGP_BALBcJ_P0078806 Mcm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078807.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86826476 86832086 - Mcm2 protein_coding processed_transcript MGP_BALBcJ_T0078808.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86826587 86832073 - MGP_BALBcJ_P0078808 Mcm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078809.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86826603 86827162 - Mcm2 protein_coding retained_intron MGP_BALBcJ_T0078810.1 MGP_BALBcJ_G0030995.1 mouse_genomes_project 6 86830330 86832062 - Mcm2 protein_coding retained_intron MGP_BALBcJ_T0008574.1 MGP_BALBcJ_G0006930.1 mouse_genomes_project 6 48556794 48569876 + Gm6559 lincRNA lincRNA MGP_BALBcJ_T0010769.1 MGP_BALBcJ_G0008894.1 mouse_genomes_project 6 86035164 86035295 - Mir6376 miRNA miRNA MGP_BALBcJ_T0080818.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139423261 139481856 + MGP_BALBcJ_P0080818 Aebp2 protein_coding protein_coding MGP_BALBcJ_T0080819.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139423267 139455127 + MGP_BALBcJ_P0080819 Aebp2 protein_coding protein_coding MGP_BALBcJ_T0080820.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139423870 139480802 + MGP_BALBcJ_P0080820 Aebp2 protein_coding protein_coding MGP_BALBcJ_T0080821.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139424481 139451572 + MGP_BALBcJ_P0080821 Aebp2 protein_coding protein_coding MGP_BALBcJ_T0080822.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139426454 139452654 + MGP_BALBcJ_P0080822 Aebp2 protein_coding protein_coding MGP_BALBcJ_T0080823.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139436327 139437758 + Aebp2 protein_coding retained_intron MGP_BALBcJ_T0080824.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139437341 139454246 + MGP_BALBcJ_P0080824 Aebp2 protein_coding protein_coding MGP_BALBcJ_T0080825.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139442677 139451858 + Aebp2 protein_coding processed_transcript MGP_BALBcJ_T0080826.1 MGP_BALBcJ_G0031431.1 mouse_genomes_project 6 139446644 139448218 + Aebp2 protein_coding processed_transcript MGP_BALBcJ_T0101266.1 MGP_BALBcJ_G0039302.1 mouse_genomes_project 6 66118298 66118431 + Gm25833 snoRNA snoRNA MGP_BALBcJ_T0015318.1 MGP_BALBcJ_G0013415.1 mouse_genomes_project 6 46870791 46871064 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078001.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69336021 69382357 - MGP_BALBcJ_P0078001 Kdm3a protein_coding protein_coding MGP_BALBcJ_T0078002.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69336023 69382138 - MGP_BALBcJ_P0078002 Kdm3a protein_coding protein_coding MGP_BALBcJ_T0078003.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69336086 69382442 - MGP_BALBcJ_P0078003 Kdm3a protein_coding protein_coding MGP_BALBcJ_T0078004.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69337177 69338982 - Kdm3a protein_coding retained_intron MGP_BALBcJ_T0078005.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69337606 69339621 - Kdm3a protein_coding retained_intron MGP_BALBcJ_T0078006.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69341013 69344212 - Kdm3a protein_coding retained_intron MGP_BALBcJ_T0078007.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69341658 69358431 - Kdm3a protein_coding processed_transcript MGP_BALBcJ_T0078008.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69344001 69346457 - Kdm3a protein_coding retained_intron MGP_BALBcJ_T0078009.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69346363 69382138 - MGP_BALBcJ_P0078009 Kdm3a protein_coding protein_coding MGP_BALBcJ_T0078010.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69346464 69348193 - Kdm3a protein_coding retained_intron MGP_BALBcJ_T0078011.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69347760 69361482 - MGP_BALBcJ_P0078011 Kdm3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078012.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69349780 69371149 - Kdm3a protein_coding retained_intron MGP_BALBcJ_T0078013.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69350169 69351018 - Kdm3a protein_coding processed_transcript MGP_BALBcJ_T0078014.1 MGP_BALBcJ_G0030842.1 mouse_genomes_project 6 69361223 69370872 - Kdm3a protein_coding processed_transcript MGP_BALBcJ_T0015388.1 MGP_BALBcJ_G0013485.1 mouse_genomes_project 6 64876816 64877398 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015451.1 MGP_BALBcJ_G0013548.1 mouse_genomes_project 6 83796585 83797429 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080587.1 MGP_BALBcJ_G0031387.1 mouse_genomes_project 6 133259660 133283430 - MGP_BALBcJ_P0080587 Mansc1 protein_coding protein_coding MGP_BALBcJ_T0078861.1 MGP_BALBcJ_G0031011.1 mouse_genomes_project 6 88209936 88211058 - MGP_BALBcJ_P0078861 Vmn1r53 protein_coding protein_coding MGP_BALBcJ_T0077228.1 MGP_BALBcJ_G0030630.1 mouse_genomes_project 6 39287069 39296397 - MGP_BALBcJ_P0077228 Fam131b protein_coding protein_coding MGP_BALBcJ_T0077229.1 MGP_BALBcJ_G0030630.1 mouse_genomes_project 6 39289916 39296226 - MGP_BALBcJ_P0077229 Fam131b protein_coding protein_coding MGP_BALBcJ_T0000136.1 MGP_BALBcJ_G0000103.1 mouse_genomes_project 6 65503816 65504283 - MGP_BALBcJ_P0000136 Igkv9-124 IG_V_gene IG_V_gene MGP_BALBcJ_T0101240.1 MGP_BALBcJ_G0039276.1 mouse_genomes_project 6 21641891 21642022 - Gm22267 snoRNA snoRNA MGP_BALBcJ_T0015320.1 MGP_BALBcJ_G0013417.1 mouse_genomes_project 6 47748654 47779633 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076349.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11595299 12161828 + MGP_BALBcJ_P0076349 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076350.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11595338 12131780 + Foxp2 protein_coding retained_intron MGP_BALBcJ_T0076351.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11595401 11674100 + Foxp2 protein_coding processed_transcript MGP_BALBcJ_T0076352.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11595427 12003518 + MGP_BALBcJ_P0076352 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076353.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11595428 12004500 + Foxp2 protein_coding retained_intron MGP_BALBcJ_T0076354.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11597425 11908652 + Foxp2 protein_coding processed_transcript MGP_BALBcJ_T0076355.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11896112 11911037 + MGP_BALBcJ_P0076355 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076356.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11896906 12161052 + MGP_BALBcJ_P0076356 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076357.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11896906 12157869 + MGP_BALBcJ_P0076357 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076358.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11896906 12158150 + MGP_BALBcJ_P0076358 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076359.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11896963 12114582 + MGP_BALBcJ_P0076359 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076360.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11898569 12161822 + MGP_BALBcJ_P0076360 Foxp2 protein_coding unknown_likely_coding MGP_BALBcJ_T0076361.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11908641 12117695 + Foxp2 protein_coding retained_intron MGP_BALBcJ_T0076362.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11908643 12098891 + MGP_BALBcJ_P0076362 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076363.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11908643 12125517 + MGP_BALBcJ_P0076363 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076364.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11908656 12125517 + MGP_BALBcJ_P0076364 Foxp2 protein_coding protein_coding MGP_BALBcJ_T0076365.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 11970463 12003518 + Foxp2 protein_coding processed_transcript MGP_BALBcJ_T0076366.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 12041828 12043006 + Foxp2 protein_coding retained_intron MGP_BALBcJ_T0076367.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 12095760 12097160 + Foxp2 protein_coding processed_transcript MGP_BALBcJ_T0076368.1 MGP_BALBcJ_G0030446.1 mouse_genomes_project 6 12095760 12158894 + MGP_BALBcJ_P0076368 Foxp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102666.1 MGP_BALBcJ_G0040481.1 mouse_genomes_project 6 131677107 131679190 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015498.1 MGP_BALBcJ_G0013595.1 mouse_genomes_project 6 103109482 103111957 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101306.1 MGP_BALBcJ_G0039342.1 mouse_genomes_project 6 147393900 147394037 - Gm23456 snoRNA snoRNA MGP_BALBcJ_T0077048.1 MGP_BALBcJ_G0030573.1 mouse_genomes_project 6 35593193 35610786 + MGP_BALBcJ_P0077048 Clec2l protein_coding protein_coding MGP_BALBcJ_T0078782.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86768717 86774704 - MGP_BALBcJ_P0078782 Abtb1 protein_coding protein_coding MGP_BALBcJ_T0078783.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86768727 86774698 - MGP_BALBcJ_P0078783 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078784.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86768951 86774788 - MGP_BALBcJ_P0078784 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078785.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86769081 86771519 - Abtb1 protein_coding retained_intron MGP_BALBcJ_T0078786.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86769226 86771670 - MGP_BALBcJ_P0078786 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078787.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86769488 86771884 - MGP_BALBcJ_P0078787 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078788.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86770918 86771959 - MGP_BALBcJ_P0078788 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078789.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86771257 86774670 - MGP_BALBcJ_P0078789 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078790.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86771460 86772393 - Abtb1 protein_coding retained_intron MGP_BALBcJ_T0078791.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86771648 86774686 - MGP_BALBcJ_P0078791 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078792.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86771821 86774634 - Abtb1 protein_coding retained_intron MGP_BALBcJ_T0078793.1 MGP_BALBcJ_G0030993.1 mouse_genomes_project 6 86772468 86774739 - MGP_BALBcJ_P0078793 Abtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078382.1 MGP_BALBcJ_G0030917.1 mouse_genomes_project 6 81571218 81591063 + MGP_BALBcJ_P0078382 Atp6v1b1 protein_coding protein_coding MGP_BALBcJ_T0078383.1 MGP_BALBcJ_G0030917.1 mouse_genomes_project 6 81571277 81582979 + Atp6v1b1 protein_coding processed_transcript MGP_BALBcJ_T0078384.1 MGP_BALBcJ_G0030917.1 mouse_genomes_project 6 81571292 81583507 + MGP_BALBcJ_P0078384 Atp6v1b1 protein_coding protein_coding MGP_BALBcJ_T0078385.1 MGP_BALBcJ_G0030917.1 mouse_genomes_project 6 81571322 81586935 + MGP_BALBcJ_P0078385 Atp6v1b1 protein_coding protein_coding MGP_BALBcJ_T0078386.1 MGP_BALBcJ_G0030917.1 mouse_genomes_project 6 81584034 81586048 + Atp6v1b1 protein_coding retained_intron MGP_BALBcJ_T0078387.1 MGP_BALBcJ_G0030917.1 mouse_genomes_project 6 81589333 81590440 + Atp6v1b1 protein_coding retained_intron MGP_BALBcJ_T0008528.1 MGP_BALBcJ_G0006899.1 mouse_genomes_project 6 28472964 28476874 - lincRNA lincRNA MGP_BALBcJ_T0015595.1 MGP_BALBcJ_G0013692.1 mouse_genomes_project 6 128684475 128684817 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078769.1 MGP_BALBcJ_G0030991.1 mouse_genomes_project 6 86486949 86552549 - MGP_BALBcJ_P0078769 Kbtbd12 protein_coding protein_coding MGP_BALBcJ_T0078770.1 MGP_BALBcJ_G0030991.1 mouse_genomes_project 6 86519967 86524101 - Kbtbd12 protein_coding retained_intron MGP_BALBcJ_T0078771.1 MGP_BALBcJ_G0030991.1 mouse_genomes_project 6 86547453 86561151 - Kbtbd12 protein_coding retained_intron MGP_BALBcJ_T0078772.1 MGP_BALBcJ_G0030991.1 mouse_genomes_project 6 86547732 86552225 - Kbtbd12 protein_coding processed_transcript MGP_BALBcJ_T0078773.1 MGP_BALBcJ_G0030991.1 mouse_genomes_project 6 86551138 86561148 - Kbtbd12 protein_coding retained_intron MGP_BALBcJ_T0078774.1 MGP_BALBcJ_G0030991.1 mouse_genomes_project 6 86552319 86571624 - MGP_BALBcJ_P0078774 Kbtbd12 protein_coding protein_coding MGP_BALBcJ_T0080281.1 MGP_BALBcJ_G0031282.1 mouse_genomes_project 6 124790917 124824514 - MGP_BALBcJ_P0080281 Kcna6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080282.1 MGP_BALBcJ_G0031282.1 mouse_genomes_project 6 124790919 124820663 - Kcna6 protein_coding processed_transcript MGP_BALBcJ_T0080283.1 MGP_BALBcJ_G0031282.1 mouse_genomes_project 6 124790920 124824526 - MGP_BALBcJ_P0080283 Kcna6 protein_coding protein_coding MGP_BALBcJ_T0080284.1 MGP_BALBcJ_G0031282.1 mouse_genomes_project 6 124820539 124824003 - MGP_BALBcJ_P0080284 Kcna6 protein_coding protein_coding MGP_BALBcJ_T0008609.1 MGP_BALBcJ_G0006958.1 mouse_genomes_project 6 69097783 69104262 - Gm44175 lincRNA lincRNA MGP_BALBcJ_T0078041.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69658957 69705878 + MGP_BALBcJ_P0078041 Polr1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078042.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69658965 69727838 + MGP_BALBcJ_P0078042 Polr1a protein_coding protein_coding MGP_BALBcJ_T0078043.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69658973 69671307 + Polr1a protein_coding retained_intron MGP_BALBcJ_T0078044.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69662296 69705763 + Polr1a protein_coding retained_intron MGP_BALBcJ_T0078045.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69676014 69676632 + Polr1a protein_coding retained_intron MGP_BALBcJ_T0078046.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69681101 69681693 + Polr1a protein_coding retained_intron MGP_BALBcJ_T0078047.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69685912 69691733 + Polr1a protein_coding processed_transcript MGP_BALBcJ_T0078048.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69699087 69705564 + MGP_BALBcJ_P0078048 Polr1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078049.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69699088 69700482 + Polr1a protein_coding retained_intron MGP_BALBcJ_T0078050.1 MGP_BALBcJ_G0030847.1 mouse_genomes_project 6 69707094 69730298 + MGP_BALBcJ_P0078050 Polr1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076445.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15106883 15170017 - Cttnbp2 protein_coding retained_intron MGP_BALBcJ_T0076446.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15106970 15176239 - MGP_BALBcJ_P0076446 Cttnbp2 protein_coding protein_coding MGP_BALBcJ_T0076447.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15107112 15258199 - MGP_BALBcJ_P0076447 Cttnbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076448.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15107626 15258271 - MGP_BALBcJ_P0076448 Cttnbp2 protein_coding protein_coding MGP_BALBcJ_T0076449.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15130191 15148238 - MGP_BALBcJ_P0076449 Cttnbp2 protein_coding protein_coding MGP_BALBcJ_T0076450.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15173727 15258249 - Cttnbp2 protein_coding retained_intron MGP_BALBcJ_T0076451.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15177038 15256484 - MGP_BALBcJ_P0076451 Cttnbp2 protein_coding protein_coding MGP_BALBcJ_T0076452.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15190009 15245445 - MGP_BALBcJ_P0076452 Cttnbp2 protein_coding protein_coding MGP_BALBcJ_T0076453.1 MGP_BALBcJ_G0030458.1 mouse_genomes_project 6 15245014 15258293 - Cttnbp2 protein_coding retained_intron MGP_BALBcJ_T0008637.1 MGP_BALBcJ_G0006980.1 mouse_genomes_project 6 84605501 84606107 - Gm44214 lincRNA lincRNA MGP_BALBcJ_T0077783.1 MGP_BALBcJ_G0030780.1 mouse_genomes_project 6 54675229 54676347 + MGP_BALBcJ_P0077783 Vmn1r19 protein_coding protein_coding MGP_BALBcJ_T0076688.1 MGP_BALBcJ_G0030512.1 mouse_genomes_project 6 26507486 26533002 + MGP_BALBcJ_P0076688 Tspan33 protein_coding protein_coding MGP_BALBcJ_T0076689.1 MGP_BALBcJ_G0030512.1 mouse_genomes_project 6 26507498 26533000 + MGP_BALBcJ_P0076689 Tspan33 protein_coding protein_coding MGP_BALBcJ_T0076690.1 MGP_BALBcJ_G0030512.1 mouse_genomes_project 6 26521544 26528469 + Tspan33 protein_coding retained_intron MGP_BALBcJ_T0015489.1 MGP_BALBcJ_G0013586.1 mouse_genomes_project 6 99224794 99225034 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015558.1 MGP_BALBcJ_G0013655.1 mouse_genomes_project 6 121167661 121167812 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001976.1 MGP_BALBcJ_G0001889.1 mouse_genomes_project 6 43842949 43846823 + TEC TEC MGP_BALBcJ_T0078334.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81123403 81135280 - MGP_BALBcJ_P0078334 Mthfd2 protein_coding protein_coding MGP_BALBcJ_T0078335.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81124114 81135227 - MGP_BALBcJ_P0078335 Mthfd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078336.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81124270 81127000 - Mthfd2 protein_coding retained_intron MGP_BALBcJ_T0078337.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81127026 81128241 - Mthfd2 protein_coding retained_intron MGP_BALBcJ_T0078338.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81127244 81129286 - Mthfd2 protein_coding retained_intron MGP_BALBcJ_T0078339.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81129037 81130090 - Mthfd2 protein_coding retained_intron MGP_BALBcJ_T0078340.1 MGP_BALBcJ_G0030907.1 mouse_genomes_project 6 81129555 81143326 - MGP_BALBcJ_P0078340 Mthfd2 protein_coding protein_coding MGP_BALBcJ_T0101264.1 MGP_BALBcJ_G0039300.1 mouse_genomes_project 6 65454964 65455104 - Gm25910 snoRNA snoRNA MGP_BALBcJ_T0005032.1 MGP_BALBcJ_G0004297.1 mouse_genomes_project 6 110305798 110309032 - 5031434C07Rik antisense antisense MGP_BALBcJ_T0005033.1 MGP_BALBcJ_G0004297.1 mouse_genomes_project 6 110306052 110309033 - 5031434C07Rik antisense antisense MGP_BALBcJ_T0010780.1 MGP_BALBcJ_G0008905.1 mouse_genomes_project 6 111551562 111551687 - Gm23365 miRNA miRNA MGP_BALBcJ_T0079854.1 MGP_BALBcJ_G0031195.1 mouse_genomes_project 6 119168489 119193460 + MGP_BALBcJ_P0079854 Usp18 protein_coding protein_coding MGP_BALBcJ_T0079855.1 MGP_BALBcJ_G0031195.1 mouse_genomes_project 6 119176338 119178296 + Usp18 protein_coding retained_intron MGP_BALBcJ_T0079856.1 MGP_BALBcJ_G0031195.1 mouse_genomes_project 6 119184038 119185775 + Usp18 protein_coding retained_intron MGP_BALBcJ_T0079857.1 MGP_BALBcJ_G0031195.1 mouse_genomes_project 6 119191140 119192056 + MGP_BALBcJ_P0079857 Usp18 protein_coding protein_coding MGP_BALBcJ_T0015586.1 MGP_BALBcJ_G0013683.1 mouse_genomes_project 6 126797184 126797298 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001984.1 MGP_BALBcJ_G0001897.1 mouse_genomes_project 6 49918616 49919228 - TEC TEC MGP_BALBcJ_T0077744.1 MGP_BALBcJ_G0030761.1 mouse_genomes_project 6 53953690 53955104 + Avl9 protein_coding retained_intron MGP_BALBcJ_T0077745.1 MGP_BALBcJ_G0030761.1 mouse_genomes_project 6 53953718 53999325 + MGP_BALBcJ_P0077745 Avl9 protein_coding protein_coding MGP_BALBcJ_T0077746.1 MGP_BALBcJ_G0030761.1 mouse_genomes_project 6 53953729 53978619 + MGP_BALBcJ_P0077746 Avl9 protein_coding protein_coding MGP_BALBcJ_T0077747.1 MGP_BALBcJ_G0030761.1 mouse_genomes_project 6 53953733 53969713 + MGP_BALBcJ_P0077747 Avl9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077748.1 MGP_BALBcJ_G0030761.1 mouse_genomes_project 6 53982374 53991465 + Avl9 protein_coding retained_intron MGP_BALBcJ_T0015308.1 MGP_BALBcJ_G0013405.1 mouse_genomes_project 6 46066710 46067039 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015319.1 MGP_BALBcJ_G0013416.1 mouse_genomes_project 6 47746874 47747246 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002054.1 MGP_BALBcJ_G0001967.1 mouse_genomes_project 6 85254269 85256375 - TEC TEC MGP_BALBcJ_T0008532.1 MGP_BALBcJ_G0006902.1 mouse_genomes_project 6 28919913 28920997 + Gm13850 lincRNA lincRNA MGP_BALBcJ_T0077640.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51248465 51277439 + Chn2 protein_coding processed_transcript MGP_BALBcJ_T0077641.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51248484 51512311 + MGP_BALBcJ_P0077641 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077642.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51248524 51431886 + MGP_BALBcJ_P0077642 Chn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077643.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51248950 51433862 + Chn2 protein_coding processed_transcript MGP_BALBcJ_T0077644.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51248997 51407218 + MGP_BALBcJ_P0077644 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077645.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51307331 51431853 + Chn2 protein_coding processed_transcript MGP_BALBcJ_T0077646.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51476127 51511883 + MGP_BALBcJ_P0077646 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077647.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51478384 51511675 + MGP_BALBcJ_P0077647 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077648.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51480403 51511981 + MGP_BALBcJ_P0077648 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077649.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51483728 51513400 + MGP_BALBcJ_P0077649 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077650.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51484146 51511834 + MGP_BALBcJ_P0077650 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077651.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51484146 51511834 + MGP_BALBcJ_P0077651 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077652.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51484146 51511834 + MGP_BALBcJ_P0077652 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077653.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51484146 51511834 + MGP_BALBcJ_P0077653 Chn2 protein_coding protein_coding MGP_BALBcJ_T0077654.1 MGP_BALBcJ_G0030739.1 mouse_genomes_project 6 51484146 51511834 + MGP_BALBcJ_P0077654 Chn2 protein_coding protein_coding MGP_BALBcJ_T0002123.1 MGP_BALBcJ_G0002036.1 mouse_genomes_project 6 114300032 114300968 + TEC TEC MGP_BALBcJ_T0080896.1 MGP_BALBcJ_G0031451.1 mouse_genomes_project 6 141538088 141557103 + MGP_BALBcJ_P0080896 Cmas protein_coding protein_coding MGP_BALBcJ_T0080897.1 MGP_BALBcJ_G0031451.1 mouse_genomes_project 6 141538156 141551979 + MGP_BALBcJ_P0080897 Cmas protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080898.1 MGP_BALBcJ_G0031451.1 mouse_genomes_project 6 141538166 141556053 + MGP_BALBcJ_P0080898 Cmas protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080899.1 MGP_BALBcJ_G0031451.1 mouse_genomes_project 6 141538177 141553609 + MGP_BALBcJ_P0080899 Cmas protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080900.1 MGP_BALBcJ_G0031451.1 mouse_genomes_project 6 141551354 141552723 + Cmas protein_coding retained_intron MGP_BALBcJ_T0076302.1 MGP_BALBcJ_G0030436.1 mouse_genomes_project 6 8592897 8599899 - MGP_BALBcJ_P0076302 Ndufa4 protein_coding protein_coding MGP_BALBcJ_T0076303.1 MGP_BALBcJ_G0030436.1 mouse_genomes_project 6 8592906 8599963 - Ndufa4 protein_coding retained_intron MGP_BALBcJ_T0077535.1 MGP_BALBcJ_G0030712.1 mouse_genomes_project 6 47720326 47743664 - MGP_BALBcJ_P0077535 4921507P07Rik protein_coding protein_coding MGP_BALBcJ_T0081041.1 MGP_BALBcJ_G0031473.1 mouse_genomes_project 6 145473842 145545495 + MGP_BALBcJ_P0081041 Stk38l protein_coding protein_coding MGP_BALBcJ_T0081042.1 MGP_BALBcJ_G0031473.1 mouse_genomes_project 6 145473883 145543241 + MGP_BALBcJ_P0081042 Stk38l protein_coding protein_coding MGP_BALBcJ_T0081043.1 MGP_BALBcJ_G0031473.1 mouse_genomes_project 6 145474165 145523827 + MGP_BALBcJ_P0081043 Stk38l protein_coding protein_coding MGP_BALBcJ_T0077776.1 MGP_BALBcJ_G0030775.1 mouse_genomes_project 6 54524472 54526001 + MGP_BALBcJ_P0077776 Vmn1r14 protein_coding protein_coding MGP_BALBcJ_T0008670.1 MGP_BALBcJ_G0007004.1 mouse_genomes_project 6 99107006 99165913 + Gm43950 lincRNA lincRNA MGP_BALBcJ_T0081140.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147744403 147859360 - MGP_BALBcJ_P0081140 Dennd5b protein_coding protein_coding MGP_BALBcJ_T0081141.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147770045 147773385 - Dennd5b protein_coding retained_intron MGP_BALBcJ_T0081142.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147770183 147859218 - Dennd5b protein_coding retained_intron MGP_BALBcJ_T0081143.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147795127 147799904 - Dennd5b protein_coding retained_intron MGP_BALBcJ_T0081144.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147825598 147838717 - MGP_BALBcJ_P0081144 Dennd5b protein_coding protein_coding MGP_BALBcJ_T0081145.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147825621 147859264 - MGP_BALBcJ_P0081145 Dennd5b protein_coding protein_coding MGP_BALBcJ_T0081146.1 MGP_BALBcJ_G0031490.1 mouse_genomes_project 6 147839778 147842757 - Dennd5b protein_coding retained_intron MGP_BALBcJ_T0101303.1 MGP_BALBcJ_G0039339.1 mouse_genomes_project 6 143605011 143605144 - Gm22792 snoRNA snoRNA MGP_BALBcJ_T0015513.1 MGP_BALBcJ_G0013610.1 mouse_genomes_project 6 110413046 110413514 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002174.1 MGP_BALBcJ_G0002086.1 mouse_genomes_project 6 144668025 144669901 + TEC TEC MGP_BALBcJ_T0008614.1 MGP_BALBcJ_G0006963.1 mouse_genomes_project 6 71194651 71215093 - lincRNA lincRNA MGP_BALBcJ_T0015491.1 MGP_BALBcJ_G0013588.1 mouse_genomes_project 6 100139006 100139791 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015321.1 MGP_BALBcJ_G0013418.1 mouse_genomes_project 6 47748654 47779634 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015248.1 MGP_BALBcJ_G0013345.1 mouse_genomes_project 6 17709907 17710460 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001909.1 MGP_BALBcJ_G0001822.1 mouse_genomes_project 6 1670270 1671498 + TEC TEC MGP_BALBcJ_T0015436.1 MGP_BALBcJ_G0013533.1 mouse_genomes_project 6 80793458 80794215 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001929.1 MGP_BALBcJ_G0001842.1 mouse_genomes_project 6 21404863 21408289 - TEC TEC MGP_BALBcJ_T0077804.1 MGP_BALBcJ_G0030788.1 mouse_genomes_project 6 55136903 55137938 - MGP_BALBcJ_P0077804 Vmn1r21 protein_coding protein_coding MGP_BALBcJ_T0077805.1 MGP_BALBcJ_G0030788.1 mouse_genomes_project 6 55137574 55143792 - MGP_BALBcJ_P0077805 Vmn1r21 protein_coding protein_coding MGP_BALBcJ_T0077806.1 MGP_BALBcJ_G0030788.1 mouse_genomes_project 6 55137581 55143794 - MGP_BALBcJ_P0077806 Vmn1r21 protein_coding protein_coding MGP_BALBcJ_T0078940.1 MGP_BALBcJ_G0031028.1 mouse_genomes_project 6 89482993 89509577 - MGP_BALBcJ_P0078940 Xpc protein_coding protein_coding MGP_BALBcJ_T0078941.1 MGP_BALBcJ_G0031028.1 mouse_genomes_project 6 89485961 89509484 - MGP_BALBcJ_P0078941 Xpc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078942.1 MGP_BALBcJ_G0031028.1 mouse_genomes_project 6 89500604 89509573 - MGP_BALBcJ_P0078942 Xpc protein_coding protein_coding MGP_BALBcJ_T0101957.1 MGP_BALBcJ_G0039815.1 mouse_genomes_project 6 129357417 129371131 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101958.1 MGP_BALBcJ_G0039815.1 mouse_genomes_project 6 129357418 129372093 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0078619.1 MGP_BALBcJ_G0030961.1 mouse_genomes_project 6 84609464 84651390 - MGP_BALBcJ_P0078619 Gmcl1 protein_coding protein_coding MGP_BALBcJ_T0078620.1 MGP_BALBcJ_G0030961.1 mouse_genomes_project 6 84631863 84634611 - Gmcl1 protein_coding retained_intron MGP_BALBcJ_T0078621.1 MGP_BALBcJ_G0030961.1 mouse_genomes_project 6 84631947 84636061 - Gmcl1 protein_coding retained_intron MGP_BALBcJ_T0078622.1 MGP_BALBcJ_G0030961.1 mouse_genomes_project 6 84637664 84651247 - MGP_BALBcJ_P0078622 Gmcl1 protein_coding protein_coding MGP_BALBcJ_T0079470.1 MGP_BALBcJ_G0031126.1 mouse_genomes_project 6 113128521 113159255 + MGP_BALBcJ_P0079470 Gm17482 protein_coding protein_coding MGP_BALBcJ_T0100017.1 MGP_BALBcJ_G0038053.1 mouse_genomes_project 6 94509381 94509478 - Gm22971 snRNA snRNA MGP_BALBcJ_T0078143.1 MGP_BALBcJ_G0030865.1 mouse_genomes_project 6 70601793 70659167 - MGP_BALBcJ_P0078143 Kcmf1 protein_coding protein_coding MGP_BALBcJ_T0078144.1 MGP_BALBcJ_G0030865.1 mouse_genomes_project 6 70601909 70659241 - MGP_BALBcJ_P0078144 Kcmf1 protein_coding protein_coding MGP_BALBcJ_T0078145.1 MGP_BALBcJ_G0030865.1 mouse_genomes_project 6 70605230 70608274 - Kcmf1 protein_coding retained_intron MGP_BALBcJ_T0078146.1 MGP_BALBcJ_G0030865.1 mouse_genomes_project 6 70607096 70617751 - Kcmf1 protein_coding processed_transcript MGP_BALBcJ_T0008732.1 MGP_BALBcJ_G0007053.1 mouse_genomes_project 6 133977468 133984910 - Gm44275 lincRNA lincRNA MGP_BALBcJ_T0008576.1 MGP_BALBcJ_G0006932.1 mouse_genomes_project 6 48577865 48579119 - 0610033M10Rik lincRNA lincRNA MGP_BALBcJ_T0008577.1 MGP_BALBcJ_G0006932.1 mouse_genomes_project 6 48578104 48578933 - 0610033M10Rik lincRNA lincRNA MGP_BALBcJ_T0078716.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85807488 85833060 + MGP_BALBcJ_P0078716 Copg1 protein_coding protein_coding MGP_BALBcJ_T0078717.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85807602 85810434 + MGP_BALBcJ_P0078717 Copg1 protein_coding protein_coding MGP_BALBcJ_T0078718.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85807614 85813482 + Copg1 protein_coding processed_transcript MGP_BALBcJ_T0078719.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85807631 85814637 + Copg1 protein_coding retained_intron MGP_BALBcJ_T0078720.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85813617 85822029 + Copg1 protein_coding retained_intron MGP_BALBcJ_T0078721.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85814790 85815777 + Copg1 protein_coding retained_intron MGP_BALBcJ_T0078722.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85815130 85824542 + Copg1 protein_coding retained_intron MGP_BALBcJ_T0078723.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85815671 85831995 + Copg1 protein_coding retained_intron MGP_BALBcJ_T0078724.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85817477 85822441 + Copg1 protein_coding retained_intron MGP_BALBcJ_T0078725.1 MGP_BALBcJ_G0030981.1 mouse_genomes_project 6 85828251 85829534 + Copg1 protein_coding processed_transcript MGP_BALBcJ_T0080094.1 MGP_BALBcJ_G0031249.1 mouse_genomes_project 6 122915497 122918812 + MGP_BALBcJ_P0080094 Cdca3 protein_coding protein_coding MGP_BALBcJ_T0080095.1 MGP_BALBcJ_G0031249.1 mouse_genomes_project 6 122915638 122919849 + MGP_BALBcJ_P0080095 Cdca3 protein_coding protein_coding MGP_BALBcJ_T0080096.1 MGP_BALBcJ_G0031249.1 mouse_genomes_project 6 122916167 122918733 + MGP_BALBcJ_P0080096 Cdca3 protein_coding protein_coding MGP_BALBcJ_T0080097.1 MGP_BALBcJ_G0031249.1 mouse_genomes_project 6 122916185 122919680 + Cdca3 protein_coding retained_intron MGP_BALBcJ_T0080098.1 MGP_BALBcJ_G0031249.1 mouse_genomes_project 6 122916313 122918180 + Cdca3 protein_coding retained_intron MGP_BALBcJ_T0080099.1 MGP_BALBcJ_G0031249.1 mouse_genomes_project 6 122916325 122918587 + MGP_BALBcJ_P0080099 Cdca3 protein_coding protein_coding MGP_BALBcJ_T0102653.1 MGP_BALBcJ_G0040468.1 mouse_genomes_project 6 128681206 128690835 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000304.1 MGP_BALBcJ_G0000245.1 mouse_genomes_project 6 67189910 67236129 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0001967.1 MGP_BALBcJ_G0001880.1 mouse_genomes_project 6 42966325 42968952 + TEC TEC MGP_BALBcJ_T0077190.1 MGP_BALBcJ_G0030619.1 mouse_genomes_project 6 38823615 38828146 + MGP_BALBcJ_P0077190 Pip protein_coding protein_coding MGP_BALBcJ_T0077191.1 MGP_BALBcJ_G0030619.1 mouse_genomes_project 6 38823648 38828038 + MGP_BALBcJ_P0077191 Pip protein_coding protein_coding MGP_BALBcJ_T0077192.1 MGP_BALBcJ_G0030619.1 mouse_genomes_project 6 38823665 38827665 + MGP_BALBcJ_P0077192 Pip protein_coding protein_coding MGP_BALBcJ_T0078070.1 MGP_BALBcJ_G0030853.1 mouse_genomes_project 6 70106653 70109573 + MGP_BALBcJ_P0078070 Tmem150a protein_coding protein_coding MGP_BALBcJ_T0078071.1 MGP_BALBcJ_G0030853.1 mouse_genomes_project 6 70107300 70110473 + Tmem150a protein_coding processed_transcript MGP_BALBcJ_T0078072.1 MGP_BALBcJ_G0030853.1 mouse_genomes_project 6 70107397 70109924 + MGP_BALBcJ_P0078072 Tmem150a protein_coding protein_coding MGP_BALBcJ_T0078073.1 MGP_BALBcJ_G0030853.1 mouse_genomes_project 6 70107419 70110419 + MGP_BALBcJ_P0078073 Tmem150a protein_coding protein_coding MGP_BALBcJ_T0079140.1 MGP_BALBcJ_G0031068.1 mouse_genomes_project 6 98927576 98945743 + protein_coding retained_intron MGP_BALBcJ_T0079141.1 MGP_BALBcJ_G0031068.1 mouse_genomes_project 6 98927627 98945832 + MGP_BALBcJ_P0079141 protein_coding protein_coding MGP_BALBcJ_T0079373.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111554685 111620923 + MGP_BALBcJ_P0079373 Fancd2 protein_coding protein_coding MGP_BALBcJ_T0079374.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111554707 111560849 + Fancd2 protein_coding retained_intron MGP_BALBcJ_T0079375.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111554707 111561732 + Fancd2 protein_coding retained_intron MGP_BALBcJ_T0079376.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111554707 111620179 + MGP_BALBcJ_P0079376 Fancd2 protein_coding protein_coding MGP_BALBcJ_T0079377.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111574552 111576719 + Fancd2 protein_coding retained_intron MGP_BALBcJ_T0079378.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111574556 111585453 + MGP_BALBcJ_P0079378 Fancd2 protein_coding protein_coding MGP_BALBcJ_T0079379.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111591672 111598324 + MGP_BALBcJ_P0079379 Fancd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079380.1 MGP_BALBcJ_G0031110.1 mouse_genomes_project 6 111607020 111609583 + Fancd2 protein_coding retained_intron MGP_BALBcJ_T0005099.1 MGP_BALBcJ_G0004353.1 mouse_genomes_project 6 143522126 143523469 + Sox5os5 antisense antisense MGP_BALBcJ_T0077141.1 MGP_BALBcJ_G0030593.1 mouse_genomes_project 6 37457706 37458719 + MGP_BALBcJ_P0077141 Tas2r108 protein_coding protein_coding MGP_BALBcJ_T0002018.1 MGP_BALBcJ_G0001931.1 mouse_genomes_project 6 75241844 75246692 - TEC TEC MGP_BALBcJ_T0080568.1 MGP_BALBcJ_G0031383.1 mouse_genomes_project 6 132503053 132506949 - MGP_BALBcJ_P0080568 Kap protein_coding protein_coding MGP_BALBcJ_T0080569.1 MGP_BALBcJ_G0031383.1 mouse_genomes_project 6 132503156 132506860 - MGP_BALBcJ_P0080569 Kap protein_coding protein_coding MGP_BALBcJ_T0002048.1 MGP_BALBcJ_G0001961.1 mouse_genomes_project 6 84794856 84796548 + TEC TEC MGP_BALBcJ_T0015642.1 MGP_BALBcJ_G0013739.1 mouse_genomes_project 6 140903607 140904677 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015259.1 MGP_BALBcJ_G0013356.1 mouse_genomes_project 6 22744288 22744623 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015329.1 MGP_BALBcJ_G0013426.1 mouse_genomes_project 6 50048642 50049235 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100013.1 MGP_BALBcJ_G0038049.1 mouse_genomes_project 6 79443461 79443620 + Gm26264 snRNA snRNA MGP_BALBcJ_T0100035.1 MGP_BALBcJ_G0038071.1 mouse_genomes_project 6 123970904 123971014 + Gm24947 snRNA snRNA MGP_BALBcJ_T0079428.1 MGP_BALBcJ_G0031121.1 mouse_genomes_project 6 112432002 112517198 + MGP_BALBcJ_P0079428 Hrh1 protein_coding protein_coding MGP_BALBcJ_T0079429.1 MGP_BALBcJ_G0031121.1 mouse_genomes_project 6 112432152 112513768 + MGP_BALBcJ_P0079429 Hrh1 protein_coding protein_coding MGP_BALBcJ_T0079430.1 MGP_BALBcJ_G0031121.1 mouse_genomes_project 6 112437732 112516372 + MGP_BALBcJ_P0079430 Hrh1 protein_coding protein_coding MGP_BALBcJ_T0079431.1 MGP_BALBcJ_G0031121.1 mouse_genomes_project 6 112437888 112516306 + MGP_BALBcJ_P0079431 Hrh1 protein_coding protein_coding MGP_BALBcJ_T0079432.1 MGP_BALBcJ_G0031121.1 mouse_genomes_project 6 112492554 112516370 + MGP_BALBcJ_P0079432 Hrh1 protein_coding protein_coding MGP_BALBcJ_T0005607.1 MGP_BALBcJ_G0004723.1 mouse_genomes_project 6 113029030 113036219 - Gm17733 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0000128.1 MGP_BALBcJ_G0000098.1 mouse_genomes_project 6 65341277 65341743 + MGP_BALBcJ_P0000128 Igkv14-130 IG_V_gene IG_V_gene MGP_BALBcJ_T0000129.1 MGP_BALBcJ_G0000098.1 mouse_genomes_project 6 65341277 65341743 + MGP_BALBcJ_P0000129 Igkv14-130 IG_V_gene IG_V_gene MGP_BALBcJ_T0076744.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27183884 27208190 - MGP_BALBcJ_P0076744 Zc3hc1 protein_coding protein_coding MGP_BALBcJ_T0076745.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27183888 27208169 - MGP_BALBcJ_P0076745 Zc3hc1 protein_coding protein_coding MGP_BALBcJ_T0076746.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27183892 27184723 - Zc3hc1 protein_coding retained_intron MGP_BALBcJ_T0076747.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27183892 27208195 - MGP_BALBcJ_P0076747 Zc3hc1 protein_coding protein_coding MGP_BALBcJ_T0076748.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27183978 27208177 - MGP_BALBcJ_P0076748 Zc3hc1 protein_coding protein_coding MGP_BALBcJ_T0076749.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27187772 27190485 - Zc3hc1 protein_coding retained_intron MGP_BALBcJ_T0076750.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27190426 27208173 - MGP_BALBcJ_P0076750 Zc3hc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076751.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27192327 27200169 - Zc3hc1 protein_coding processed_transcript MGP_BALBcJ_T0076752.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27193507 27208156 - MGP_BALBcJ_P0076752 Zc3hc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076753.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27202262 27208177 - Zc3hc1 protein_coding retained_intron MGP_BALBcJ_T0076754.1 MGP_BALBcJ_G0030518.1 mouse_genomes_project 6 27204796 27208181 - Zc3hc1 protein_coding retained_intron MGP_BALBcJ_T0015556.1 MGP_BALBcJ_G0013653.1 mouse_genomes_project 6 120594160 120594920 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001991.1 MGP_BALBcJ_G0001904.1 mouse_genomes_project 6 54975724 54978566 - TEC TEC MGP_BALBcJ_T0011634.1 MGP_BALBcJ_G0009759.1 mouse_genomes_project 6 54867081 54870669 + Gm27896 misc_RNA misc_RNA MGP_BALBcJ_T0102647.1 MGP_BALBcJ_G0040463.1 mouse_genomes_project 6 126809032 126820286 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102648.1 MGP_BALBcJ_G0040463.1 mouse_genomes_project 6 126809055 126815495 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0080437.1 MGP_BALBcJ_G0031319.1 mouse_genomes_project 6 127389279 127401617 + MGP_BALBcJ_P0080437 Clec2d protein_coding protein_coding MGP_BALBcJ_T0077255.1 MGP_BALBcJ_G0030641.1 mouse_genomes_project 6 39608015 39630393 - MGP_BALBcJ_P0077255 Tcaf2 protein_coding protein_coding MGP_BALBcJ_T0077256.1 MGP_BALBcJ_G0030641.1 mouse_genomes_project 6 39611409 39614440 - Tcaf2 protein_coding retained_intron MGP_BALBcJ_T0078449.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82468044 82910724 - MGP_BALBcJ_P0078449 Exoc6b protein_coding protein_coding MGP_BALBcJ_T0078450.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82672396 82910724 - Exoc6b protein_coding retained_intron MGP_BALBcJ_T0078451.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82673274 82910668 - Exoc6b protein_coding retained_intron MGP_BALBcJ_T0078452.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82691338 82910713 - MGP_BALBcJ_P0078452 Exoc6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078453.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82729387 82733402 - Exoc6b protein_coding retained_intron MGP_BALBcJ_T0078454.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82786030 82910713 - Exoc6b protein_coding processed_transcript MGP_BALBcJ_T0078455.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82827603 82910679 - Exoc6b protein_coding retained_intron MGP_BALBcJ_T0078456.1 MGP_BALBcJ_G0030925.1 mouse_genomes_project 6 82845157 82910686 - Exoc6b protein_coding retained_intron MGP_BALBcJ_T0018265.1 MGP_BALBcJ_G0015583.1 mouse_genomes_project 6 114241969 114244199 - Gm44957 processed_transcript retained_intron MGP_BALBcJ_T0018266.1 MGP_BALBcJ_G0015583.1 mouse_genomes_project 6 114241984 114244686 - Gm44957 processed_transcript bidirectional_promoter_lncRNA MGP_BALBcJ_T0010729.1 MGP_BALBcJ_G0008854.1 mouse_genomes_project 6 16293309 16293429 + Mir6370 miRNA miRNA MGP_BALBcJ_T0078464.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83064298 83186585 - MGP_BALBcJ_P0078464 Sfxn5 protein_coding protein_coding MGP_BALBcJ_T0078465.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83080550 83116852 - Sfxn5 protein_coding processed_transcript MGP_BALBcJ_T0078466.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83085632 83186582 - MGP_BALBcJ_P0078466 Sfxn5 protein_coding protein_coding MGP_BALBcJ_T0078467.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83120632 83186569 - Sfxn5 protein_coding retained_intron MGP_BALBcJ_T0078468.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83146834 83186582 - Sfxn5 protein_coding processed_transcript MGP_BALBcJ_T0078469.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83150826 83186585 - MGP_BALBcJ_P0078469 Sfxn5 protein_coding protein_coding MGP_BALBcJ_T0078470.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83150828 83173560 - Sfxn5 protein_coding processed_transcript MGP_BALBcJ_T0078471.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83172043 83185913 - MGP_BALBcJ_P0078471 Sfxn5 protein_coding protein_coding MGP_BALBcJ_T0078472.1 MGP_BALBcJ_G0030929.1 mouse_genomes_project 6 83182108 83186585 - Sfxn5 protein_coding retained_intron MGP_BALBcJ_T0077785.1 MGP_BALBcJ_G0030782.1 mouse_genomes_project 6 54719809 54720716 + MGP_BALBcJ_P0077785 protein_coding protein_coding MGP_BALBcJ_T0078218.1 MGP_BALBcJ_G0030884.1 mouse_genomes_project 6 80415100 80504440 - Pole4 protein_coding processed_transcript MGP_BALBcJ_T0078219.1 MGP_BALBcJ_G0030884.1 mouse_genomes_project 6 80417982 80442581 - MGP_BALBcJ_P0078219 Pole4 protein_coding protein_coding MGP_BALBcJ_T0078220.1 MGP_BALBcJ_G0030884.1 mouse_genomes_project 6 80436361 80442640 - MGP_BALBcJ_P0078220 Pole4 protein_coding protein_coding MGP_BALBcJ_T0078221.1 MGP_BALBcJ_G0030884.1 mouse_genomes_project 6 80437730 80442550 - MGP_BALBcJ_P0078221 Pole4 protein_coding unknown_likely_coding MGP_BALBcJ_T0000184.1 MGP_BALBcJ_G0000139.1 mouse_genomes_project 6 67761591 67762159 - MGP_BALBcJ_P0000184 Igkv7-33 IG_V_gene IG_V_gene MGP_BALBcJ_T0000185.1 MGP_BALBcJ_G0000139.1 mouse_genomes_project 6 67761591 67762159 - MGP_BALBcJ_P0000185 Igkv7-33 IG_V_gene IG_V_gene MGP_BALBcJ_T0010798.1 MGP_BALBcJ_G0008923.1 mouse_genomes_project 6 127125969 127126025 - Gm27336 miRNA miRNA MGP_BALBcJ_T0004919.1 MGP_BALBcJ_G0004226.1 mouse_genomes_project 6 37915102 37915400 + Gm29588 antisense antisense MGP_BALBcJ_T0080564.1 MGP_BALBcJ_G0031381.1 mouse_genomes_project 6 131442123 131445326 + MGP_BALBcJ_P0080564 Smim10l1 protein_coding protein_coding MGP_BALBcJ_T0080565.1 MGP_BALBcJ_G0031381.1 mouse_genomes_project 6 131442479 131448480 + MGP_BALBcJ_P0080565 Smim10l1 protein_coding protein_coding MGP_BALBcJ_T0080566.1 MGP_BALBcJ_G0031381.1 mouse_genomes_project 6 131442513 131448482 + MGP_BALBcJ_P0080566 Smim10l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005084.1 MGP_BALBcJ_G0004341.1 mouse_genomes_project 6 134554746 134564228 + Gm14330 antisense antisense MGP_BALBcJ_T0078844.1 MGP_BALBcJ_G0031000.1 mouse_genomes_project 6 87609152 87640709 + MGP_BALBcJ_P0078844 Txnrd3 protein_coding protein_coding MGP_BALBcJ_T0078845.1 MGP_BALBcJ_G0031000.1 mouse_genomes_project 6 87609152 87640709 + MGP_BALBcJ_P0078845 Txnrd3 protein_coding protein_coding MGP_BALBcJ_T0077159.1 MGP_BALBcJ_G0030601.1 mouse_genomes_project 6 37867981 37874309 - MGP_BALBcJ_P0077159 Prss58 protein_coding protein_coding MGP_BALBcJ_T0100030.1 MGP_BALBcJ_G0038066.1 mouse_genomes_project 6 118291844 118291950 - Gm24592 snRNA snRNA MGP_BALBcJ_T0011654.1 MGP_BALBcJ_G0009779.1 mouse_genomes_project 6 140780410 140780659 - Gm23775 misc_RNA misc_RNA MGP_BALBcJ_T0102638.1 MGP_BALBcJ_G0040454.1 mouse_genomes_project 6 87977340 87987773 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0080998.1 MGP_BALBcJ_G0031467.1 mouse_genomes_project 6 144730344 144763880 + MGP_BALBcJ_P0080998 Sspn protein_coding protein_coding MGP_BALBcJ_T0080999.1 MGP_BALBcJ_G0031467.1 mouse_genomes_project 6 144732782 144763880 + MGP_BALBcJ_P0080999 Sspn protein_coding protein_coding MGP_BALBcJ_T0081000.1 MGP_BALBcJ_G0031467.1 mouse_genomes_project 6 144752086 144763880 + MGP_BALBcJ_P0081000 Sspn protein_coding protein_coding MGP_BALBcJ_T0077956.1 MGP_BALBcJ_G0030827.1 mouse_genomes_project 6 64885506 64963933 - MGP_BALBcJ_P0077956 Il23r protein_coding protein_coding MGP_BALBcJ_T0011641.1 MGP_BALBcJ_G0009766.1 mouse_genomes_project 6 97632457 97632704 + Gm24936 misc_RNA misc_RNA MGP_BALBcJ_T0015272.1 MGP_BALBcJ_G0013369.1 mouse_genomes_project 6 33508040 33508468 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005105.1 MGP_BALBcJ_G0004359.1 mouse_genomes_project 6 145757568 145759215 - Gm44085 antisense antisense MGP_BALBcJ_T0079862.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119266430 119289027 + MGP_BALBcJ_P0079862 Slc6a12 protein_coding protein_coding MGP_BALBcJ_T0079863.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119266753 119270962 + MGP_BALBcJ_P0079863 Slc6a12 protein_coding protein_coding MGP_BALBcJ_T0079864.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119269972 119289430 + MGP_BALBcJ_P0079864 Slc6a12 protein_coding protein_coding MGP_BALBcJ_T0079865.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119270773 119278677 + MGP_BALBcJ_P0079865 Slc6a12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079866.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119270773 119289027 + MGP_BALBcJ_P0079866 Slc6a12 protein_coding protein_coding MGP_BALBcJ_T0079867.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119280170 119285603 + Slc6a12 protein_coding retained_intron MGP_BALBcJ_T0079868.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119280183 119287019 + Slc6a12 protein_coding retained_intron MGP_BALBcJ_T0079869.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119280268 119289027 + MGP_BALBcJ_P0079869 Slc6a12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079870.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119280268 119289027 + MGP_BALBcJ_P0079870 Slc6a12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079871.1 MGP_BALBcJ_G0031197.1 mouse_genomes_project 6 119282297 119287549 + Slc6a12 protein_coding retained_intron MGP_BALBcJ_T0002089.1 MGP_BALBcJ_G0002002.1 mouse_genomes_project 6 92864522 92865527 + TEC TEC MGP_BALBcJ_T0002093.1 MGP_BALBcJ_G0002006.1 mouse_genomes_project 6 98216423 98216815 - TEC TEC MGP_BALBcJ_T0001963.1 MGP_BALBcJ_G0001876.1 mouse_genomes_project 6 42383218 42385479 + TEC TEC MGP_BALBcJ_T0078500.1 MGP_BALBcJ_G0030935.1 mouse_genomes_project 6 83330873 83365239 - MGP_BALBcJ_P0078500 Fbxo41 protein_coding protein_coding MGP_BALBcJ_T0078501.1 MGP_BALBcJ_G0030935.1 mouse_genomes_project 6 83330877 83365131 - MGP_BALBcJ_P0078501 Fbxo41 protein_coding protein_coding MGP_BALBcJ_T0078502.1 MGP_BALBcJ_G0030935.1 mouse_genomes_project 6 83330879 83365103 - MGP_BALBcJ_P0078502 Fbxo41 protein_coding protein_coding MGP_BALBcJ_T0011627.1 MGP_BALBcJ_G0009752.1 mouse_genomes_project 6 49443883 49444116 + Gm27817 misc_RNA misc_RNA MGP_BALBcJ_T0080467.1 MGP_BALBcJ_G0031328.1 mouse_genomes_project 6 127731169 127737852 + MGP_BALBcJ_P0080467 Tmem52b protein_coding protein_coding MGP_BALBcJ_T0080468.1 MGP_BALBcJ_G0031328.1 mouse_genomes_project 6 127731227 127736084 + MGP_BALBcJ_P0080468 Tmem52b protein_coding protein_coding MGP_BALBcJ_T0080469.1 MGP_BALBcJ_G0031328.1 mouse_genomes_project 6 127734431 127736115 + Tmem52b protein_coding retained_intron MGP_BALBcJ_T0080470.1 MGP_BALBcJ_G0031328.1 mouse_genomes_project 6 127735181 127736165 + Tmem52b protein_coding retained_intron MGP_BALBcJ_T0015331.1 MGP_BALBcJ_G0013428.1 mouse_genomes_project 6 50378800 50379986 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078747.1 MGP_BALBcJ_G0030987.1 mouse_genomes_project 6 86154167 86155157 + MGP_BALBcJ_P0078747 Dnajb8 protein_coding protein_coding MGP_BALBcJ_T0078748.1 MGP_BALBcJ_G0030987.1 mouse_genomes_project 6 86154784 86186048 + MGP_BALBcJ_P0078748 Dnajb8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079606.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114545623 114590721 - MGP_BALBcJ_P0079606 Rassf4 protein_coding protein_coding MGP_BALBcJ_T0079607.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114551839 114590578 - MGP_BALBcJ_P0079607 Rassf4 protein_coding protein_coding MGP_BALBcJ_T0079608.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114552103 114553618 - Rassf4 protein_coding processed_transcript MGP_BALBcJ_T0079609.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114555540 114590558 - Rassf4 protein_coding retained_intron MGP_BALBcJ_T0079610.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114557853 114560552 - Rassf4 protein_coding retained_intron MGP_BALBcJ_T0079611.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114558518 114590540 - MGP_BALBcJ_P0079611 Rassf4 protein_coding protein_coding MGP_BALBcJ_T0079612.1 MGP_BALBcJ_G0031154.1 mouse_genomes_project 6 114558589 114590567 - MGP_BALBcJ_P0079612 Rassf4 protein_coding protein_coding MGP_BALBcJ_T0018226.1 MGP_BALBcJ_G0015570.1 mouse_genomes_project 6 51187994 51226116 + 4921529L05Rik processed_transcript processed_transcript MGP_BALBcJ_T0018227.1 MGP_BALBcJ_G0015570.1 mouse_genomes_project 6 51188004 51191098 + 4921529L05Rik processed_transcript processed_transcript MGP_BALBcJ_T0018228.1 MGP_BALBcJ_G0015570.1 mouse_genomes_project 6 51188032 51219270 + 4921529L05Rik processed_transcript processed_transcript MGP_BALBcJ_T0018229.1 MGP_BALBcJ_G0015570.1 mouse_genomes_project 6 51219195 51226761 + 4921529L05Rik processed_transcript processed_transcript MGP_BALBcJ_T0015214.1 MGP_BALBcJ_G0013311.1 mouse_genomes_project 6 4258056 4258417 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080422.1 MGP_BALBcJ_G0031316.1 mouse_genomes_project 6 127128046 127181855 + MGP_BALBcJ_P0080422 Clec2g protein_coding protein_coding MGP_BALBcJ_T0080423.1 MGP_BALBcJ_G0031316.1 mouse_genomes_project 6 127128070 127146597 + Clec2g protein_coding retained_intron MGP_BALBcJ_T0080424.1 MGP_BALBcJ_G0031316.1 mouse_genomes_project 6 127163527 127180396 + MGP_BALBcJ_P0080424 Clec2g protein_coding protein_coding MGP_BALBcJ_T0080428.1 MGP_BALBcJ_G0031316.1 mouse_genomes_project 6 127175972 127180532 + MGP_BALBcJ_P0080428 Clec2g protein_coding protein_coding MGP_BALBcJ_T0080429.1 MGP_BALBcJ_G0031316.1 mouse_genomes_project 6 127175972 127180342 + MGP_BALBcJ_P0080429 Clec2g protein_coding protein_coding MGP_BALBcJ_T0078904.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89001290 89105651 - MGP_BALBcJ_P0078904 Nup210 protein_coding protein_coding MGP_BALBcJ_T0078905.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89001292 89105641 - MGP_BALBcJ_P0078905 Nup210 protein_coding protein_coding MGP_BALBcJ_T0078906.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89001292 89043522 - MGP_BALBcJ_P0078906 Nup210 protein_coding protein_coding MGP_BALBcJ_T0078907.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89001539 89005650 - Nup210 protein_coding processed_transcript MGP_BALBcJ_T0078908.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89006965 89013498 - Nup210 protein_coding retained_intron MGP_BALBcJ_T0078909.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89007144 89012041 - Nup210 protein_coding processed_transcript MGP_BALBcJ_T0078910.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89014568 89018247 - Nup210 protein_coding retained_intron MGP_BALBcJ_T0078911.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89040720 89041759 - Nup210 protein_coding processed_transcript MGP_BALBcJ_T0078912.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89048847 89054511 - Nup210 protein_coding processed_transcript MGP_BALBcJ_T0078913.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89073464 89086277 - Nup210 protein_coding retained_intron MGP_BALBcJ_T0078914.1 MGP_BALBcJ_G0031022.1 mouse_genomes_project 6 89103178 89105618 - Nup210 protein_coding retained_intron MGP_BALBcJ_T0077029.1 MGP_BALBcJ_G0030570.1 mouse_genomes_project 6 35447357 35454393 + Fmc1 protein_coding processed_transcript MGP_BALBcJ_T0077030.1 MGP_BALBcJ_G0030570.1 mouse_genomes_project 6 35448678 35454394 + MGP_BALBcJ_P0077030 Fmc1 protein_coding protein_coding MGP_BALBcJ_T0008767.1 MGP_BALBcJ_G0007078.1 mouse_genomes_project 6 147453488 147464273 + Gm44115 lincRNA lincRNA MGP_BALBcJ_T0077283.1 MGP_BALBcJ_G0030656.1 mouse_genomes_project 6 40260770 40261712 + MGP_BALBcJ_P0077283 Olfr435 protein_coding protein_coding MGP_BALBcJ_T0080206.1 MGP_BALBcJ_G0031266.1 mouse_genomes_project 6 123243457 123248218 - protein_coding retained_intron MGP_BALBcJ_T0080207.1 MGP_BALBcJ_G0031266.1 mouse_genomes_project 6 123246549 123248818 - MGP_BALBcJ_P0080207 protein_coding protein_coding MGP_BALBcJ_T0080208.1 MGP_BALBcJ_G0031266.1 mouse_genomes_project 6 123246560 123248818 - protein_coding processed_transcript MGP_BALBcJ_T0080209.1 MGP_BALBcJ_G0031266.1 mouse_genomes_project 6 123247811 123248820 - protein_coding retained_intron MGP_BALBcJ_T0001930.1 MGP_BALBcJ_G0001843.1 mouse_genomes_project 6 24209960 24219590 - TEC TEC MGP_BALBcJ_T0000312.1 MGP_BALBcJ_G0000253.1 mouse_genomes_project 6 67813966 67814522 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0077015.1 MGP_BALBcJ_G0030568.1 mouse_genomes_project 6 35289544 35336243 + MGP_BALBcJ_P0077015 Ttc26 protein_coding protein_coding MGP_BALBcJ_T0077016.1 MGP_BALBcJ_G0030568.1 mouse_genomes_project 6 35289600 35303218 + MGP_BALBcJ_P0077016 Ttc26 protein_coding protein_coding MGP_BALBcJ_T0077017.1 MGP_BALBcJ_G0030568.1 mouse_genomes_project 6 35289600 35336243 + MGP_BALBcJ_P0077017 Ttc26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077018.1 MGP_BALBcJ_G0030568.1 mouse_genomes_project 6 35289604 35306334 + MGP_BALBcJ_P0077018 Ttc26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077019.1 MGP_BALBcJ_G0030568.1 mouse_genomes_project 6 35299582 35303556 + Ttc26 protein_coding retained_intron MGP_BALBcJ_T0080604.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133518351 133547981 - MGP_BALBcJ_P0080604 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080605.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133518351 133547871 - MGP_BALBcJ_P0080605 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080606.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133518366 133547914 - MGP_BALBcJ_P0080606 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080607.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133518415 133537172 - MGP_BALBcJ_P0080607 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080608.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133518420 133547919 - MGP_BALBcJ_P0080608 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080609.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133519295 133547881 - MGP_BALBcJ_P0080609 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080610.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133519466 133547871 - MGP_BALBcJ_P0080610 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080611.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133519507 133537108 - MGP_BALBcJ_P0080611 Gpr19 protein_coding protein_coding MGP_BALBcJ_T0080612.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133526501 133547943 - Gpr19 protein_coding processed_transcript MGP_BALBcJ_T0080613.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133536230 133547143 - Gpr19 protein_coding processed_transcript MGP_BALBcJ_T0080614.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133536990 133548623 - Gpr19 protein_coding processed_transcript MGP_BALBcJ_T0080615.1 MGP_BALBcJ_G0031391.1 mouse_genomes_project 6 133546756 133547981 - Gpr19 protein_coding processed_transcript MGP_BALBcJ_T0015267.1 MGP_BALBcJ_G0013364.1 mouse_genomes_project 6 30092676 30093448 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002175.1 MGP_BALBcJ_G0002087.1 mouse_genomes_project 6 144745732 144748603 + TEC TEC MGP_BALBcJ_T0076162.1 MGP_BALBcJ_G0030405.1 mouse_genomes_project 6 674216 679525 - MGP_BALBcJ_P0076162 Tfpi2 protein_coding protein_coding MGP_BALBcJ_T0076163.1 MGP_BALBcJ_G0030405.1 mouse_genomes_project 6 676394 699954 - MGP_BALBcJ_P0076163 Tfpi2 protein_coding protein_coding MGP_BALBcJ_T0018254.1 MGP_BALBcJ_G0015579.1 mouse_genomes_project 6 70364955 70372075 + Gm20536 processed_transcript processed_transcript MGP_BALBcJ_T0079182.1 MGP_BALBcJ_G0031076.1 mouse_genomes_project 6 104799233 104819295 - MGP_BALBcJ_P0079182 Crbn protein_coding protein_coding MGP_BALBcJ_T0079183.1 MGP_BALBcJ_G0031076.1 mouse_genomes_project 6 104799233 104819286 - MGP_BALBcJ_P0079183 Crbn protein_coding protein_coding MGP_BALBcJ_T0079184.1 MGP_BALBcJ_G0031076.1 mouse_genomes_project 6 104802690 104818254 - MGP_BALBcJ_P0079184 Crbn protein_coding protein_coding MGP_BALBcJ_T0079185.1 MGP_BALBcJ_G0031076.1 mouse_genomes_project 6 104807968 104819282 - Crbn protein_coding retained_intron MGP_BALBcJ_T0079186.1 MGP_BALBcJ_G0031076.1 mouse_genomes_project 6 104816400 104819298 - Crbn protein_coding retained_intron MGP_BALBcJ_T0002153.1 MGP_BALBcJ_G0002065.1 mouse_genomes_project 6 132726971 132729845 + TEC TEC MGP_BALBcJ_T0080771.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137167187 137390719 - MGP_BALBcJ_P0080771 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0080772.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137168465 137226496 - MGP_BALBcJ_P0080772 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0080773.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137169231 137229676 - MGP_BALBcJ_P0080773 Lmo3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080774.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137169860 137228026 - MGP_BALBcJ_P0080774 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0080775.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137169864 137227969 - MGP_BALBcJ_P0080775 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0080776.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137170171 137232250 - MGP_BALBcJ_P0080776 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0080777.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137182113 137228051 - MGP_BALBcJ_P0080777 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0080778.1 MGP_BALBcJ_G0031423.1 mouse_genomes_project 6 137221880 137231904 - MGP_BALBcJ_P0080778 Lmo3 protein_coding protein_coding MGP_BALBcJ_T0078279.1 MGP_BALBcJ_G0030895.1 mouse_genomes_project 6 80890465 80892371 + MGP_BALBcJ_P0078279 Lbx2 protein_coding protein_coding MGP_BALBcJ_T0078280.1 MGP_BALBcJ_G0030895.1 mouse_genomes_project 6 80891465 80892224 + Lbx2 protein_coding processed_transcript MGP_BALBcJ_T0002651.1 MGP_BALBcJ_G0002537.1 mouse_genomes_project 6 38028457 38028929 + MGP_BALBcJ_P0002651 Trbv5 TR_V_gene TR_V_gene MGP_BALBcJ_T0015359.1 MGP_BALBcJ_G0013456.1 mouse_genomes_project 6 62477416 62477978 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077273.1 MGP_BALBcJ_G0030648.1 mouse_genomes_project 6 39880217 39881150 + MGP_BALBcJ_P0077273 Olfr448 protein_coding protein_coding MGP_BALBcJ_T0078161.1 MGP_BALBcJ_G0030869.1 mouse_genomes_project 6 71212652 71213747 - MGP_BALBcJ_P0078161 4931417E11Rik protein_coding protein_coding MGP_BALBcJ_T0078162.1 MGP_BALBcJ_G0030869.1 mouse_genomes_project 6 71212660 71213699 - 4931417E11Rik protein_coding processed_transcript MGP_BALBcJ_T0078163.1 MGP_BALBcJ_G0030869.1 mouse_genomes_project 6 71212726 71213644 - 4931417E11Rik protein_coding transcribed_processed_pseudogene MGP_BALBcJ_T0000147.1 MGP_BALBcJ_G0000113.1 mouse_genomes_project 6 66057058 66057514 + MGP_BALBcJ_P0000147 Igkv20-101-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0015361.1 MGP_BALBcJ_G0013458.1 mouse_genomes_project 6 62637705 62637934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102645.1 MGP_BALBcJ_G0040461.1 mouse_genomes_project 6 122163299 122164317 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001948.1 MGP_BALBcJ_G0001861.1 mouse_genomes_project 6 36060169 36061386 - TEC TEC MGP_BALBcJ_T0078281.1 MGP_BALBcJ_G0030896.1 mouse_genomes_project 6 80905730 80912434 + MGP_BALBcJ_P0078281 Ccdc142 protein_coding protein_coding MGP_BALBcJ_T0078283.1 MGP_BALBcJ_G0030896.1 mouse_genomes_project 6 80905787 80907984 + Ccdc142 protein_coding retained_intron MGP_BALBcJ_T0078284.1 MGP_BALBcJ_G0030896.1 mouse_genomes_project 6 80911140 80911874 + Ccdc142 protein_coding retained_intron MGP_BALBcJ_T0078689.1 MGP_BALBcJ_G0030976.1 mouse_genomes_project 6 85697879 85699576 + MGP_BALBcJ_P0078689 Gp9 protein_coding protein_coding MGP_BALBcJ_T0078514.1 MGP_BALBcJ_G0030942.1 mouse_genomes_project 6 83688431 83690126 - MGP_BALBcJ_P0078514 Nat8 protein_coding protein_coding MGP_BALBcJ_T0076454.1 MGP_BALBcJ_G0030459.1 mouse_genomes_project 6 15590164 15595639 + MGP_BALBcJ_P0076454 Lsm8 protein_coding protein_coding MGP_BALBcJ_T0076455.1 MGP_BALBcJ_G0030459.1 mouse_genomes_project 6 15590226 15597337 + Lsm8 protein_coding retained_intron MGP_BALBcJ_T0076456.1 MGP_BALBcJ_G0030459.1 mouse_genomes_project 6 15590241 15591993 + Lsm8 protein_coding retained_intron MGP_BALBcJ_T0076457.1 MGP_BALBcJ_G0030459.1 mouse_genomes_project 6 15590253 15595333 + MGP_BALBcJ_P0076457 Lsm8 protein_coding protein_coding MGP_BALBcJ_T0004888.1 MGP_BALBcJ_G0004199.1 mouse_genomes_project 6 13949030 14129376 - Gm15581 antisense antisense MGP_BALBcJ_T0079422.1 MGP_BALBcJ_G0031120.1 mouse_genomes_project 6 112314117 112348970 + MGP_BALBcJ_P0079422 Slc6a1 protein_coding protein_coding MGP_BALBcJ_T0079423.1 MGP_BALBcJ_G0031120.1 mouse_genomes_project 6 112314312 112338554 + Slc6a1 protein_coding retained_intron MGP_BALBcJ_T0079424.1 MGP_BALBcJ_G0031120.1 mouse_genomes_project 6 112314312 112343968 + Slc6a1 protein_coding retained_intron MGP_BALBcJ_T0079425.1 MGP_BALBcJ_G0031120.1 mouse_genomes_project 6 112331448 112333377 + Slc6a1 protein_coding processed_transcript MGP_BALBcJ_T0079426.1 MGP_BALBcJ_G0031120.1 mouse_genomes_project 6 112332669 112333377 + Slc6a1 protein_coding retained_intron MGP_BALBcJ_T0079427.1 MGP_BALBcJ_G0031120.1 mouse_genomes_project 6 112344724 112347042 + Slc6a1 protein_coding retained_intron MGP_BALBcJ_T0079666.1 MGP_BALBcJ_G0031167.1 mouse_genomes_project 6 116352400 116371728 - MGP_BALBcJ_P0079666 Zfp9 protein_coding protein_coding MGP_BALBcJ_T0079667.1 MGP_BALBcJ_G0031167.1 mouse_genomes_project 6 116357213 116358796 - Zfp9 protein_coding retained_intron MGP_BALBcJ_T0080294.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125007206 125025857 - MGP_BALBcJ_P0080294 Rad51ap1 protein_coding protein_coding MGP_BALBcJ_T0080295.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125007571 125009969 - Rad51ap1 protein_coding retained_intron MGP_BALBcJ_T0080296.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125007571 125025857 - MGP_BALBcJ_P0080296 Rad51ap1 protein_coding protein_coding MGP_BALBcJ_T0080297.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125008335 125009875 - Rad51ap1 protein_coding processed_transcript MGP_BALBcJ_T0080298.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125009146 125012412 - Rad51ap1 protein_coding retained_intron MGP_BALBcJ_T0080299.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125010501 125025841 - MGP_BALBcJ_P0080299 Rad51ap1 protein_coding protein_coding MGP_BALBcJ_T0080300.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125010517 125012250 - Rad51ap1 protein_coding retained_intron MGP_BALBcJ_T0080301.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125011786 125025816 - Rad51ap1 protein_coding processed_transcript MGP_BALBcJ_T0080302.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125012248 125025845 - MGP_BALBcJ_P0080302 Rad51ap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080303.1 MGP_BALBcJ_G0031286.1 mouse_genomes_project 6 125012819 125025857 - Rad51ap1 protein_coding retained_intron MGP_BALBcJ_T0011640.1 MGP_BALBcJ_G0009765.1 mouse_genomes_project 6 86340510 86340835 + Gm25178 misc_RNA misc_RNA MGP_BALBcJ_T0102624.1 MGP_BALBcJ_G0040440.1 mouse_genomes_project 6 55829888 55830788 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0001943.1 MGP_BALBcJ_G0001856.1 mouse_genomes_project 6 29886421 29889417 - TEC TEC MGP_BALBcJ_T0002002.1 MGP_BALBcJ_G0001915.1 mouse_genomes_project 6 69539716 69542525 + TEC TEC MGP_BALBcJ_T0005058.1 MGP_BALBcJ_G0004319.1 mouse_genomes_project 6 123003497 123012470 + A230083G16Rik antisense antisense MGP_BALBcJ_T0079058.1 MGP_BALBcJ_G0031053.1 mouse_genomes_project 6 95190105 95221747 - MGP_BALBcJ_P0079058 Tmf1 protein_coding protein_coding MGP_BALBcJ_T0079059.1 MGP_BALBcJ_G0031053.1 mouse_genomes_project 6 95197040 95221662 - MGP_BALBcJ_P0079059 Tmf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079060.1 MGP_BALBcJ_G0031053.1 mouse_genomes_project 6 95202027 95210600 - Tmf1 protein_coding processed_transcript MGP_BALBcJ_T0002178.1 MGP_BALBcJ_G0002090.1 mouse_genomes_project 6 145607926 145608853 - TEC TEC MGP_BALBcJ_T0077333.1 MGP_BALBcJ_G0030665.1 mouse_genomes_project 6 44901954 44919149 - MGP_BALBcJ_P0077333 Pdia4 protein_coding protein_coding MGP_BALBcJ_T0077334.1 MGP_BALBcJ_G0030665.1 mouse_genomes_project 6 44912747 44919083 - Pdia4 protein_coding processed_transcript MGP_BALBcJ_T0078895.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88642752 88702969 - MGP_BALBcJ_P0078895 Iqsec1 protein_coding protein_coding MGP_BALBcJ_T0078896.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88646262 88648943 - Iqsec1 protein_coding retained_intron MGP_BALBcJ_T0078897.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88646262 88797148 - MGP_BALBcJ_P0078897 Iqsec1 protein_coding protein_coding MGP_BALBcJ_T0078898.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88649282 88655306 - Iqsec1 protein_coding processed_transcript MGP_BALBcJ_T0078899.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88649466 88654654 - Iqsec1 protein_coding processed_transcript MGP_BALBcJ_T0078900.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88676268 88681147 - Iqsec1 protein_coding processed_transcript MGP_BALBcJ_T0078901.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88676982 88751194 - MGP_BALBcJ_P0078901 Iqsec1 protein_coding protein_coding MGP_BALBcJ_T0078902.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88677112 88723419 - Iqsec1 protein_coding processed_transcript MGP_BALBcJ_T0078903.1 MGP_BALBcJ_G0031021.1 mouse_genomes_project 6 88681049 88744612 - Iqsec1 protein_coding processed_transcript MGP_BALBcJ_T0077433.1 MGP_BALBcJ_G0030689.1 mouse_genomes_project 6 45842228 45877292 + MGP_BALBcJ_P0077433 Gm28053 protein_coding protein_coding MGP_BALBcJ_T0077435.1 MGP_BALBcJ_G0030689.1 mouse_genomes_project 6 45842275 45853314 + Gm28053 protein_coding retained_intron MGP_BALBcJ_T0077439.1 MGP_BALBcJ_G0030689.1 mouse_genomes_project 6 45862583 45877336 + MGP_BALBcJ_P0077439 Gm28053 protein_coding protein_coding MGP_BALBcJ_T0098631.1 MGP_BALBcJ_G0036685.1 mouse_genomes_project 6 92894388 92894531 - Gm24601 rRNA rRNA MGP_BALBcJ_T0005066.1 MGP_BALBcJ_G0004326.1 mouse_genomes_project 6 125227524 125290238 + 9330179D12Rik antisense antisense MGP_BALBcJ_T0005067.1 MGP_BALBcJ_G0004326.1 mouse_genomes_project 6 125227761 125290530 + 9330179D12Rik antisense antisense MGP_BALBcJ_T0077130.1 MGP_BALBcJ_G0030590.1 mouse_genomes_project 6 37400265 37416287 + MGP_BALBcJ_P0077130 Wee2 protein_coding protein_coding MGP_BALBcJ_T0077131.1 MGP_BALBcJ_G0030590.1 mouse_genomes_project 6 37404004 37427962 + MGP_BALBcJ_P0077131 Wee2 protein_coding protein_coding MGP_BALBcJ_T0077132.1 MGP_BALBcJ_G0030590.1 mouse_genomes_project 6 37404078 37405296 + MGP_BALBcJ_P0077132 Wee2 protein_coding protein_coding MGP_BALBcJ_T0008597.1 MGP_BALBcJ_G0006947.1 mouse_genomes_project 6 58070220 58074634 + Gm35386 lincRNA lincRNA MGP_BALBcJ_T0015661.1 MGP_BALBcJ_G0013758.1 mouse_genomes_project 6 148174904 148175768 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080111.1 MGP_BALBcJ_G0031252.1 mouse_genomes_project 6 122945036 122950511 - MGP_BALBcJ_P0080111 Gpr162 protein_coding protein_coding MGP_BALBcJ_T0080112.1 MGP_BALBcJ_G0031252.1 mouse_genomes_project 6 122945039 122950306 - Gpr162 protein_coding retained_intron MGP_BALBcJ_T0080113.1 MGP_BALBcJ_G0031252.1 mouse_genomes_project 6 122945040 122950577 - MGP_BALBcJ_P0080113 Gpr162 protein_coding protein_coding MGP_BALBcJ_T0080114.1 MGP_BALBcJ_G0031252.1 mouse_genomes_project 6 122948323 122950306 - Gpr162 protein_coding processed_transcript MGP_BALBcJ_T0015356.1 MGP_BALBcJ_G0013453.1 mouse_genomes_project 6 61598858 61599023 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010734.1 MGP_BALBcJ_G0008859.1 mouse_genomes_project 6 26194306 26194449 - Gm44354 miRNA miRNA MGP_BALBcJ_T0011630.1 MGP_BALBcJ_G0009755.1 mouse_genomes_project 6 49458299 49458358 + Gm27280 misc_RNA misc_RNA MGP_BALBcJ_T0076631.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26144579 26170867 + MGP_BALBcJ_P0076631 Calu protein_coding protein_coding MGP_BALBcJ_T0076632.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26144579 26170867 + MGP_BALBcJ_P0076632 Calu protein_coding protein_coding MGP_BALBcJ_T0076633.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26144616 26173039 + MGP_BALBcJ_P0076633 Calu protein_coding protein_coding MGP_BALBcJ_T0076634.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26144629 26172493 + MGP_BALBcJ_P0076634 Calu protein_coding protein_coding MGP_BALBcJ_T0076635.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26144650 26173040 + MGP_BALBcJ_P0076635 Calu protein_coding protein_coding MGP_BALBcJ_T0076636.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26152839 26171389 + MGP_BALBcJ_P0076636 Calu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076637.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26157830 26169706 + MGP_BALBcJ_P0076637 Calu protein_coding protein_coding MGP_BALBcJ_T0076638.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26168910 26173474 + MGP_BALBcJ_P0076638 Calu protein_coding protein_coding MGP_BALBcJ_T0076639.1 MGP_BALBcJ_G0030503.1 mouse_genomes_project 6 26170019 26171395 + Calu protein_coding processed_transcript MGP_BALBcJ_T0015297.1 MGP_BALBcJ_G0013394.1 mouse_genomes_project 6 42013738 42014441 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101935.1 MGP_BALBcJ_G0039803.1 mouse_genomes_project 6 54980418 54980635 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0004890.1 MGP_BALBcJ_G0004201.1 mouse_genomes_project 6 15011663 15030634 - Gm15592 antisense antisense MGP_BALBcJ_T0001983.1 MGP_BALBcJ_G0001896.1 mouse_genomes_project 6 49801277 49805022 - TEC TEC MGP_BALBcJ_T0077705.1 MGP_BALBcJ_G0030751.1 mouse_genomes_project 6 52407156 52411739 - MGP_BALBcJ_P0077705 Inmt protein_coding protein_coding MGP_BALBcJ_T0077706.1 MGP_BALBcJ_G0030751.1 mouse_genomes_project 6 52409454 52411710 - Inmt protein_coding retained_intron MGP_BALBcJ_T0102616.1 MGP_BALBcJ_G0040432.1 mouse_genomes_project 6 55290233 55290367 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015349.1 MGP_BALBcJ_G0013446.1 mouse_genomes_project 6 59785147 59785456 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080022.1 MGP_BALBcJ_G0031238.1 mouse_genomes_project 6 122789154 122793483 - Emg1 protein_coding retained_intron MGP_BALBcJ_T0080023.1 MGP_BALBcJ_G0031238.1 mouse_genomes_project 6 122789450 122797244 - MGP_BALBcJ_P0080023 Emg1 protein_coding protein_coding MGP_BALBcJ_T0080024.1 MGP_BALBcJ_G0031238.1 mouse_genomes_project 6 122789451 122790729 - Emg1 protein_coding processed_transcript MGP_BALBcJ_T0080025.1 MGP_BALBcJ_G0031238.1 mouse_genomes_project 6 122789527 122797135 - Emg1 protein_coding retained_intron MGP_BALBcJ_T0080026.1 MGP_BALBcJ_G0031238.1 mouse_genomes_project 6 122790020 122797207 - Emg1 protein_coding retained_intron MGP_BALBcJ_T0080027.1 MGP_BALBcJ_G0031238.1 mouse_genomes_project 6 122790229 122797123 - MGP_BALBcJ_P0080027 Emg1 protein_coding protein_coding MGP_BALBcJ_T0008735.1 MGP_BALBcJ_G0007055.1 mouse_genomes_project 6 134410224 134421642 + Gm14329 lincRNA lincRNA MGP_BALBcJ_T0079408.1 MGP_BALBcJ_G0031117.1 mouse_genomes_project 6 111753629 111766311 - MGP_BALBcJ_P0079408 Sec13 protein_coding protein_coding MGP_BALBcJ_T0079409.1 MGP_BALBcJ_G0031117.1 mouse_genomes_project 6 111755997 111760638 - Sec13 protein_coding retained_intron MGP_BALBcJ_T0079410.1 MGP_BALBcJ_G0031117.1 mouse_genomes_project 6 111756163 111760638 - Sec13 protein_coding retained_intron MGP_BALBcJ_T0079411.1 MGP_BALBcJ_G0031117.1 mouse_genomes_project 6 111764696 111766295 - Sec13 protein_coding retained_intron MGP_BALBcJ_T0008610.1 MGP_BALBcJ_G0006959.1 mouse_genomes_project 6 69195682 69202669 + Gm44172 lincRNA lincRNA MGP_BALBcJ_T0015215.1 MGP_BALBcJ_G0013312.1 mouse_genomes_project 6 4359684 4360321 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001956.1 MGP_BALBcJ_G0001869.1 mouse_genomes_project 6 42131444 42135204 + TEC TEC MGP_BALBcJ_T0015541.1 MGP_BALBcJ_G0013638.1 mouse_genomes_project 6 118491980 118492317 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008626.1 MGP_BALBcJ_G0006972.1 mouse_genomes_project 6 80680078 80684067 - 2310069B03Rik lincRNA lincRNA MGP_BALBcJ_T0008627.1 MGP_BALBcJ_G0006972.1 mouse_genomes_project 6 80680741 80684067 - 2310069B03Rik lincRNA lincRNA MGP_BALBcJ_T0008628.1 MGP_BALBcJ_G0006972.1 mouse_genomes_project 6 80681635 80684046 - 2310069B03Rik lincRNA lincRNA MGP_BALBcJ_T0015222.1 MGP_BALBcJ_G0013319.1 mouse_genomes_project 6 7056188 7056813 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079047.1 MGP_BALBcJ_G0031050.1 mouse_genomes_project 6 94208193 94209934 - MGP_BALBcJ_P0079047 1700123L14Rik protein_coding protein_coding MGP_BALBcJ_T0001987.1 MGP_BALBcJ_G0001900.1 mouse_genomes_project 6 52129788 52133096 + TEC TEC MGP_BALBcJ_T0000132.1 MGP_BALBcJ_G0000100.1 mouse_genomes_project 6 65430839 65431236 + MGP_BALBcJ_P0000132 Igkv17-121 IG_V_gene IG_V_gene MGP_BALBcJ_T0001923.1 MGP_BALBcJ_G0001836.1 mouse_genomes_project 6 14666272 14671877 + TEC TEC MGP_BALBcJ_T0011620.1 MGP_BALBcJ_G0009745.1 mouse_genomes_project 6 49353278 49353403 + Gm27867 misc_RNA misc_RNA MGP_BALBcJ_T0080705.1 MGP_BALBcJ_G0031415.1 mouse_genomes_project 6 135698197 135741593 + MGP_BALBcJ_P0080705 Pde6h protein_coding protein_coding MGP_BALBcJ_T0080709.1 MGP_BALBcJ_G0031415.1 mouse_genomes_project 6 135732939 135747065 + MGP_BALBcJ_P0080709 Pde6h protein_coding protein_coding MGP_BALBcJ_T0080710.1 MGP_BALBcJ_G0031415.1 mouse_genomes_project 6 135732949 135741838 + Pde6h protein_coding retained_intron MGP_BALBcJ_T0080711.1 MGP_BALBcJ_G0031415.1 mouse_genomes_project 6 135737618 135741624 + MGP_BALBcJ_P0080711 Pde6h protein_coding protein_coding MGP_BALBcJ_T0018230.1 MGP_BALBcJ_G0015571.1 mouse_genomes_project 6 51457046 51466210 - Gm15527 processed_transcript retained_intron MGP_BALBcJ_T0018231.1 MGP_BALBcJ_G0015571.1 mouse_genomes_project 6 51459475 51490315 - Gm15527 processed_transcript antisense MGP_BALBcJ_T0018232.1 MGP_BALBcJ_G0015571.1 mouse_genomes_project 6 51459491 51490317 - Gm15527 processed_transcript antisense MGP_BALBcJ_T0079655.1 MGP_BALBcJ_G0031164.1 mouse_genomes_project 6 116044000 116090752 - MGP_BALBcJ_P0079655 Ret protein_coding protein_coding MGP_BALBcJ_T0079656.1 MGP_BALBcJ_G0031164.1 mouse_genomes_project 6 116046821 116091337 - MGP_BALBcJ_P0079656 Ret protein_coding protein_coding MGP_BALBcJ_T0101299.1 MGP_BALBcJ_G0039335.1 mouse_genomes_project 6 129729722 129729856 - Gm22362 snoRNA snoRNA MGP_BALBcJ_T0005080.1 MGP_BALBcJ_G0004337.1 mouse_genomes_project 6 133400289 133401240 + Gm44025 antisense antisense MGP_BALBcJ_T0079671.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116474138 117091281 - MGP_BALBcJ_P0079671 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079672.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116479202 116482321 - Cacna1c protein_coding processed_transcript MGP_BALBcJ_T0079673.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116479217 116644167 - Cacna1c protein_coding processed_transcript MGP_BALBcJ_T0079674.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116479362 117002411 - MGP_BALBcJ_P0079674 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079675.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116479840 117002458 - MGP_BALBcJ_P0079675 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079676.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116479840 117002411 - MGP_BALBcJ_P0079676 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079677.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116479980 117091468 - MGP_BALBcJ_P0079677 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079678.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480545 117002780 - MGP_BALBcJ_P0079678 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079679.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480545 117091437 - MGP_BALBcJ_P0079679 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079680.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480691 117002197 - MGP_BALBcJ_P0079680 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079681.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480691 117002197 - MGP_BALBcJ_P0079681 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079682.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480691 117002197 - MGP_BALBcJ_P0079682 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079683.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480691 117002197 - MGP_BALBcJ_P0079683 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079684.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480691 117002197 - MGP_BALBcJ_P0079684 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079685.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480691 117002197 - MGP_BALBcJ_P0079685 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079686.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480697 116974320 - MGP_BALBcJ_P0079686 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079687.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480790 117002197 - MGP_BALBcJ_P0079687 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079688.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480790 117091281 - MGP_BALBcJ_P0079688 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079689.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116480790 117002197 - MGP_BALBcJ_P0079689 Cacna1c protein_coding protein_coding MGP_BALBcJ_T0079690.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116500953 116514477 - Cacna1c protein_coding processed_transcript MGP_BALBcJ_T0079691.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116588501 116593423 - Cacna1c protein_coding retained_intron MGP_BALBcJ_T0079692.1 MGP_BALBcJ_G0031169.1 mouse_genomes_project 6 116839509 117091459 - Cacna1c protein_coding processed_transcript MGP_BALBcJ_T0005011.1 MGP_BALBcJ_G0004285.1 mouse_genomes_project 6 88676181 88677280 + Gm44123 antisense antisense MGP_BALBcJ_T0002041.1 MGP_BALBcJ_G0001954.1 mouse_genomes_project 6 83937131 83938971 + TEC TEC MGP_BALBcJ_T0015654.1 MGP_BALBcJ_G0013751.1 mouse_genomes_project 6 147450519 147451127 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079817.1 MGP_BALBcJ_G0031189.1 mouse_genomes_project 6 118712169 118720247 - Atp6v1e1 protein_coding retained_intron MGP_BALBcJ_T0079818.1 MGP_BALBcJ_G0031189.1 mouse_genomes_project 6 118713100 118735632 - MGP_BALBcJ_P0079818 Atp6v1e1 protein_coding protein_coding MGP_BALBcJ_T0079819.1 MGP_BALBcJ_G0031189.1 mouse_genomes_project 6 118713110 118731256 - MGP_BALBcJ_P0079819 Atp6v1e1 protein_coding protein_coding MGP_BALBcJ_T0079820.1 MGP_BALBcJ_G0031189.1 mouse_genomes_project 6 118721574 118735524 - Atp6v1e1 protein_coding retained_intron MGP_BALBcJ_T0079821.1 MGP_BALBcJ_G0031189.1 mouse_genomes_project 6 118721912 118735531 - MGP_BALBcJ_P0079821 Atp6v1e1 protein_coding protein_coding MGP_BALBcJ_T0079822.1 MGP_BALBcJ_G0031189.1 mouse_genomes_project 6 118725350 118735378 - MGP_BALBcJ_P0079822 Atp6v1e1 protein_coding protein_coding MGP_BALBcJ_T0080853.1 MGP_BALBcJ_G0031441.1 mouse_genomes_project 6 141020068 141059681 - MGP_BALBcJ_P0080853 Slco1a5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080854.1 MGP_BALBcJ_G0031441.1 mouse_genomes_project 6 141020068 141105902 - MGP_BALBcJ_P0080854 Slco1a5 protein_coding protein_coding MGP_BALBcJ_T0080855.1 MGP_BALBcJ_G0031441.1 mouse_genomes_project 6 141020068 141062941 - MGP_BALBcJ_P0080855 Slco1a5 protein_coding protein_coding MGP_BALBcJ_T0080856.1 MGP_BALBcJ_G0031441.1 mouse_genomes_project 6 141033483 141062941 - Slco1a5 protein_coding retained_intron MGP_BALBcJ_T0080857.1 MGP_BALBcJ_G0031441.1 mouse_genomes_project 6 141040009 141105869 - MGP_BALBcJ_P0080857 Slco1a5 protein_coding protein_coding MGP_BALBcJ_T0080445.1 MGP_BALBcJ_G0031322.1 mouse_genomes_project 6 127562562 127580789 + MGP_BALBcJ_P0080445 Clec12a protein_coding protein_coding MGP_BALBcJ_T0080446.1 MGP_BALBcJ_G0031322.1 mouse_genomes_project 6 127569609 127573694 + Clec12a protein_coding retained_intron MGP_BALBcJ_T0080447.1 MGP_BALBcJ_G0031322.1 mouse_genomes_project 6 127569831 127586738 + MGP_BALBcJ_P0080447 Clec12a protein_coding protein_coding MGP_BALBcJ_T0080448.1 MGP_BALBcJ_G0031322.1 mouse_genomes_project 6 127576871 127585851 + Clec12a protein_coding retained_intron MGP_BALBcJ_T0000050.1 MGP_BALBcJ_G0000040.1 mouse_genomes_project 6 68454220 68454258 + MGP_BALBcJ_P0000050 Igkj4 IG_J_gene IG_J_gene MGP_BALBcJ_T0076279.1 MGP_BALBcJ_G0030432.1 mouse_genomes_project 6 4977733 5317572 + MGP_BALBcJ_P0076279 Gm45062 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000166.1 MGP_BALBcJ_G0000126.1 mouse_genomes_project 6 66508579 66509813 - MGP_BALBcJ_P0000166 Gm42543 IG_V_gene IG_V_gene MGP_BALBcJ_T0002176.1 MGP_BALBcJ_G0002088.1 mouse_genomes_project 6 145022714 145025063 - TEC TEC MGP_BALBcJ_T0102601.1 MGP_BALBcJ_G0040417.1 mouse_genomes_project 6 38382971 38383324 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0080551.1 MGP_BALBcJ_G0031368.1 mouse_genomes_project 6 131122629 131123673 + MGP_BALBcJ_P0080551 Tas2r102 protein_coding protein_coding MGP_BALBcJ_T0080830.1 MGP_BALBcJ_G0031434.1 mouse_genomes_project 6 140329741 140374666 + MGP_BALBcJ_P0080830 Slco1c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080831.1 MGP_BALBcJ_G0031434.1 mouse_genomes_project 6 140329759 140374682 + MGP_BALBcJ_P0080831 Slco1c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080832.1 MGP_BALBcJ_G0031434.1 mouse_genomes_project 6 140329761 140374490 + MGP_BALBcJ_P0080832 Slco1c1 protein_coding protein_coding MGP_BALBcJ_T0080833.1 MGP_BALBcJ_G0031434.1 mouse_genomes_project 6 140329908 140375075 + MGP_BALBcJ_P0080833 Slco1c1 protein_coding protein_coding MGP_BALBcJ_T0080834.1 MGP_BALBcJ_G0031434.1 mouse_genomes_project 6 140351346 140353646 + Slco1c1 protein_coding retained_intron MGP_BALBcJ_T0002656.1 MGP_BALBcJ_G0002541.1 mouse_genomes_project 6 38087771 38088208 + MGP_BALBcJ_P0002656 Trbv13-2 TR_V_gene TR_V_gene MGP_BALBcJ_T0015425.1 MGP_BALBcJ_G0013522.1 mouse_genomes_project 6 74264036 74264511 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001910.1 MGP_BALBcJ_G0001823.1 mouse_genomes_project 6 1683050 1683370 + TEC TEC MGP_BALBcJ_T0010801.1 MGP_BALBcJ_G0008926.1 mouse_genomes_project 6 134418324 134418429 + Gm22892 miRNA miRNA MGP_BALBcJ_T0018269.1 MGP_BALBcJ_G0015585.1 mouse_genomes_project 6 120587490 120598298 - Gm16556 processed_transcript processed_transcript MGP_BALBcJ_T0018270.1 MGP_BALBcJ_G0015585.1 mouse_genomes_project 6 120587516 120598274 - Gm16556 processed_transcript processed_transcript MGP_BALBcJ_T0079983.1 MGP_BALBcJ_G0031226.1 mouse_genomes_project 6 121720548 121763658 + MGP_BALBcJ_P0079983 Vmn2r23 protein_coding protein_coding MGP_BALBcJ_T0015394.1 MGP_BALBcJ_G0013491.1 mouse_genomes_project 6 65298190 65298351 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080663.1 MGP_BALBcJ_G0031404.1 mouse_genomes_project 6 135102520 135124674 - MGP_BALBcJ_P0080663 E330021D16Rik protein_coding protein_coding MGP_BALBcJ_T0080664.1 MGP_BALBcJ_G0031404.1 mouse_genomes_project 6 135102908 135104024 - MGP_BALBcJ_P0080664 E330021D16Rik protein_coding protein_coding MGP_BALBcJ_T0080665.1 MGP_BALBcJ_G0031404.1 mouse_genomes_project 6 135103688 135124669 - MGP_BALBcJ_P0080665 E330021D16Rik protein_coding protein_coding MGP_BALBcJ_T0078734.1 MGP_BALBcJ_G0030984.1 mouse_genomes_project 6 85929706 85974913 - MGP_BALBcJ_P0078734 Rab7 protein_coding protein_coding MGP_BALBcJ_T0078735.1 MGP_BALBcJ_G0030984.1 mouse_genomes_project 6 85934444 85974899 - MGP_BALBcJ_P0078735 Rab7 protein_coding protein_coding MGP_BALBcJ_T0078736.1 MGP_BALBcJ_G0030984.1 mouse_genomes_project 6 85934502 85974866 - MGP_BALBcJ_P0078736 Rab7 protein_coding protein_coding MGP_BALBcJ_T0008598.1 MGP_BALBcJ_G0006948.1 mouse_genomes_project 6 58562598 58567145 - Gm43893 lincRNA lincRNA MGP_BALBcJ_T0102661.1 MGP_BALBcJ_G0040476.1 mouse_genomes_project 6 131325792 131326695 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008530.1 MGP_BALBcJ_G0006900.1 mouse_genomes_project 6 28513657 28518684 - Gm43293 lincRNA lincRNA MGP_BALBcJ_T0080011.1 MGP_BALBcJ_G0031235.1 mouse_genomes_project 6 122669934 122702748 - MGP_BALBcJ_P0080011 protein_coding protein_coding MGP_BALBcJ_T0079050.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95143220 95186291 - MGP_BALBcJ_P0079050 Eogt protein_coding protein_coding MGP_BALBcJ_T0079051.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95145174 95185992 - Eogt protein_coding processed_transcript MGP_BALBcJ_T0079052.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95145203 95186036 - MGP_BALBcJ_P0079052 Eogt protein_coding protein_coding MGP_BALBcJ_T0079053.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95145388 95152665 - Eogt protein_coding processed_transcript MGP_BALBcJ_T0079054.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95169312 95184893 - MGP_BALBcJ_P0079054 Eogt protein_coding protein_coding MGP_BALBcJ_T0079055.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95181087 95184903 - MGP_BALBcJ_P0079055 Eogt protein_coding protein_coding MGP_BALBcJ_T0079056.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95182378 95185969 - MGP_BALBcJ_P0079056 Eogt protein_coding protein_coding MGP_BALBcJ_T0079057.1 MGP_BALBcJ_G0031052.1 mouse_genomes_project 6 95182432 95186033 - MGP_BALBcJ_P0079057 Eogt protein_coding protein_coding MGP_BALBcJ_T0002009.1 MGP_BALBcJ_G0001922.1 mouse_genomes_project 6 70398691 70399923 - TEC TEC MGP_BALBcJ_T0015303.1 MGP_BALBcJ_G0013400.1 mouse_genomes_project 6 44954710 44955107 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102635.1 MGP_BALBcJ_G0040451.1 mouse_genomes_project 6 87661804 87662603 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000273.1 MGP_BALBcJ_G0000214.1 mouse_genomes_project 6 65405267 65405733 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008683.1 MGP_BALBcJ_G0007015.1 mouse_genomes_project 6 111655618 111657114 - 1700015O11Rik lincRNA lincRNA MGP_BALBcJ_T0008505.1 MGP_BALBcJ_G0006885.1 mouse_genomes_project 6 26799233 26806985 + Smkr-ps lincRNA lincRNA MGP_BALBcJ_T0008506.1 MGP_BALBcJ_G0006885.1 mouse_genomes_project 6 26799235 26807238 + Smkr-ps lincRNA lincRNA MGP_BALBcJ_T0015224.1 MGP_BALBcJ_G0013321.1 mouse_genomes_project 6 7597591 7603763 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077197.1 MGP_BALBcJ_G0030621.1 mouse_genomes_project 6 38929829 38934298 + MGP_BALBcJ_P0077197 Sval1 protein_coding protein_coding MGP_BALBcJ_T0099996.1 MGP_BALBcJ_G0038032.1 mouse_genomes_project 6 32124825 32124981 + Gm23435 snRNA snRNA MGP_BALBcJ_T0076929.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31753014 31784051 - MGP_BALBcJ_P0076929 Wdr91 protein_coding protein_coding MGP_BALBcJ_T0076930.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31753014 31784051 - MGP_BALBcJ_P0076930 Wdr91 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076931.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31777841 31783770 - MGP_BALBcJ_P0076931 Wdr91 protein_coding protein_coding MGP_BALBcJ_T0076932.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31779837 31783837 - MGP_BALBcJ_P0076932 Wdr91 protein_coding protein_coding MGP_BALBcJ_T0076933.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31781469 31783738 - MGP_BALBcJ_P0076933 Wdr91 protein_coding protein_coding MGP_BALBcJ_T0076934.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31781721 31784008 - Wdr91 protein_coding retained_intron MGP_BALBcJ_T0076935.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31782621 31784011 - Wdr91 protein_coding processed_transcript MGP_BALBcJ_T0076936.1 MGP_BALBcJ_G0030548.1 mouse_genomes_project 6 31782635 31784017 - Wdr91 protein_coding processed_transcript MGP_BALBcJ_T0078998.1 MGP_BALBcJ_G0031039.1 mouse_genomes_project 6 90394992 90732539 - MGP_BALBcJ_P0078998 Prickle2 protein_coding protein_coding MGP_BALBcJ_T0078999.1 MGP_BALBcJ_G0031039.1 mouse_genomes_project 6 90394992 90593769 - MGP_BALBcJ_P0078999 Prickle2 protein_coding protein_coding MGP_BALBcJ_T0079000.1 MGP_BALBcJ_G0031039.1 mouse_genomes_project 6 90394994 90561434 - MGP_BALBcJ_P0079000 Prickle2 protein_coding protein_coding MGP_BALBcJ_T0079001.1 MGP_BALBcJ_G0031039.1 mouse_genomes_project 6 90399460 90508251 - MGP_BALBcJ_P0079001 Prickle2 protein_coding protein_coding MGP_BALBcJ_T0102603.1 MGP_BALBcJ_G0040419.1 mouse_genomes_project 6 38474844 38476375 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0079984.1 MGP_BALBcJ_G0031227.1 mouse_genomes_project 6 121794372 122086117 + MGP_BALBcJ_P0079984 Vmn2r24 protein_coding protein_coding MGP_BALBcJ_T0015524.1 MGP_BALBcJ_G0013621.1 mouse_genomes_project 6 112643334 112648060 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008760.1 MGP_BALBcJ_G0007073.1 mouse_genomes_project 6 146462035 146474198 + 1700049E15Rik lincRNA lincRNA MGP_BALBcJ_T0008761.1 MGP_BALBcJ_G0007073.1 mouse_genomes_project 6 146466521 146474172 + 1700049E15Rik lincRNA lincRNA MGP_BALBcJ_T0015633.1 MGP_BALBcJ_G0013730.1 mouse_genomes_project 6 138811464 138811836 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080496.1 MGP_BALBcJ_G0031337.1 mouse_genomes_project 6 127943974 127955880 - MGP_BALBcJ_P0080496 Klri2 protein_coding protein_coding MGP_BALBcJ_T0000167.1 MGP_BALBcJ_G0000127.1 mouse_genomes_project 6 66543280 66543843 - MGP_BALBcJ_P0000167 Igkv4-86 IG_V_gene IG_V_gene MGP_BALBcJ_T0000168.1 MGP_BALBcJ_G0000127.1 mouse_genomes_project 6 66543280 66543808 - MGP_BALBcJ_P0000168 Igkv4-86 IG_V_gene IG_V_gene MGP_BALBcJ_T0100039.1 MGP_BALBcJ_G0038075.1 mouse_genomes_project 6 128602550 128602624 + Gm22621 snRNA snRNA MGP_BALBcJ_T0000299.1 MGP_BALBcJ_G0000240.1 mouse_genomes_project 6 66786194 66786661 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0002114.1 MGP_BALBcJ_G0002027.1 mouse_genomes_project 6 111062564 111064674 - TEC TEC MGP_BALBcJ_T0077795.1 MGP_BALBcJ_G0030785.1 mouse_genomes_project 6 54977561 54983247 - MGP_BALBcJ_P0077795 Pyurf protein_coding protein_coding MGP_BALBcJ_T0001974.1 MGP_BALBcJ_G0001887.1 mouse_genomes_project 6 43480839 43483367 + TEC TEC MGP_BALBcJ_T0077619.1 MGP_BALBcJ_G0030735.1 mouse_genomes_project 6 49975351 50115370 - Jazf1 protein_coding processed_transcript MGP_BALBcJ_T0077620.1 MGP_BALBcJ_G0030735.1 mouse_genomes_project 6 49975351 49984864 - Jazf1 protein_coding processed_transcript MGP_BALBcJ_T0077621.1 MGP_BALBcJ_G0030735.1 mouse_genomes_project 6 49975351 50275495 - MGP_BALBcJ_P0077621 Jazf1 protein_coding protein_coding MGP_BALBcJ_T0008658.1 MGP_BALBcJ_G0006995.1 mouse_genomes_project 6 89596401 89602684 + Gm45218 lincRNA lincRNA MGP_BALBcJ_T0001982.1 MGP_BALBcJ_G0001895.1 mouse_genomes_project 6 49761731 49764414 + TEC TEC MGP_BALBcJ_T0002143.1 MGP_BALBcJ_G0002055.1 mouse_genomes_project 6 126264662 126266080 - TEC TEC MGP_BALBcJ_T0018236.1 MGP_BALBcJ_G0015573.1 mouse_genomes_project 6 54761993 54927054 + processed_transcript processed_transcript MGP_BALBcJ_T0102639.1 MGP_BALBcJ_G0040455.1 mouse_genomes_project 6 88032309 88032547 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002147.1 MGP_BALBcJ_G0002059.1 mouse_genomes_project 6 127741187 127744450 + TEC TEC MGP_BALBcJ_T0078177.1 MGP_BALBcJ_G0030872.1 mouse_genomes_project 6 76184286 76186528 + MGP_BALBcJ_P0078177 Reg3b protein_coding protein_coding MGP_BALBcJ_T0078178.1 MGP_BALBcJ_G0030872.1 mouse_genomes_project 6 76184490 76187096 + MGP_BALBcJ_P0078178 Reg3b protein_coding protein_coding MGP_BALBcJ_T0078179.1 MGP_BALBcJ_G0030872.1 mouse_genomes_project 6 76184527 76186538 + MGP_BALBcJ_P0078179 Reg3b protein_coding protein_coding MGP_BALBcJ_T0078180.1 MGP_BALBcJ_G0030872.1 mouse_genomes_project 6 76186160 76187048 + Reg3b protein_coding retained_intron MGP_BALBcJ_T0077309.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44550770 44596370 + MGP_BALBcJ_P0077309 Cul1 protein_coding protein_coding MGP_BALBcJ_T0077310.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44550864 44583624 + MGP_BALBcJ_P0077310 Cul1 protein_coding protein_coding MGP_BALBcJ_T0077311.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44551276 44622896 + MGP_BALBcJ_P0077311 Cul1 protein_coding protein_coding MGP_BALBcJ_T0077312.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44551692 44625269 + MGP_BALBcJ_P0077312 Cul1 protein_coding protein_coding MGP_BALBcJ_T0077313.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44551760 44583836 + MGP_BALBcJ_P0077313 Cul1 protein_coding protein_coding MGP_BALBcJ_T0077314.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44613953 44625188 + Cul1 protein_coding processed_transcript MGP_BALBcJ_T0077315.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44616137 44618919 + Cul1 protein_coding retained_intron MGP_BALBcJ_T0077316.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44618835 44622411 + Cul1 protein_coding retained_intron MGP_BALBcJ_T0077317.1 MGP_BALBcJ_G0030663.1 mouse_genomes_project 6 44622693 44624909 + Cul1 protein_coding processed_transcript MGP_BALBcJ_T0078848.1 MGP_BALBcJ_G0031003.1 mouse_genomes_project 6 87805691 87806789 - MGP_BALBcJ_P0078848 Vmn1r42 protein_coding protein_coding MGP_BALBcJ_T0015600.1 MGP_BALBcJ_G0013697.1 mouse_genomes_project 6 128919367 128919558 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076532.1 MGP_BALBcJ_G0030479.1 mouse_genomes_project 6 21344677 21352321 + MGP_BALBcJ_P0076532 Lmod2 protein_coding protein_coding MGP_BALBcJ_T0102602.1 MGP_BALBcJ_G0040418.1 mouse_genomes_project 6 38397518 38401070 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002036.1 MGP_BALBcJ_G0001949.1 mouse_genomes_project 6 80878717 80880250 - TEC TEC MGP_BALBcJ_T0079790.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118274669 118358103 + MGP_BALBcJ_P0079790 Kdm5a protein_coding protein_coding MGP_BALBcJ_T0079791.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118274669 118331857 + MGP_BALBcJ_P0079791 Kdm5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079792.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118274677 118280146 + Kdm5a protein_coding retained_intron MGP_BALBcJ_T0079793.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118275003 118331830 + MGP_BALBcJ_P0079793 Kdm5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079794.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118275159 118355740 + MGP_BALBcJ_P0079794 Kdm5a protein_coding unknown_likely_coding MGP_BALBcJ_T0079795.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118285313 118299143 + MGP_BALBcJ_P0079795 Kdm5a protein_coding protein_coding MGP_BALBcJ_T0079796.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118318227 118326216 + Kdm5a protein_coding retained_intron MGP_BALBcJ_T0079797.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118340333 118343663 + Kdm5a protein_coding retained_intron MGP_BALBcJ_T0079798.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118342917 118345424 + Kdm5a protein_coding retained_intron MGP_BALBcJ_T0079799.1 MGP_BALBcJ_G0031183.1 mouse_genomes_project 6 118343584 118353201 + Kdm5a protein_coding processed_transcript MGP_BALBcJ_T0008636.1 MGP_BALBcJ_G0006979.1 mouse_genomes_project 6 84430417 84432797 - Gm44386 lincRNA lincRNA MGP_BALBcJ_T0004880.1 MGP_BALBcJ_G0004196.1 mouse_genomes_project 6 5070127 5080208 - Gm16055 antisense antisense MGP_BALBcJ_T0000051.1 MGP_BALBcJ_G0000041.1 mouse_genomes_project 6 68454558 68454600 + Igkj5 IG_J_gene processed_transcript MGP_BALBcJ_T0000052.1 MGP_BALBcJ_G0000041.1 mouse_genomes_project 6 68454558 68454596 + MGP_BALBcJ_P0000052 Igkj5 IG_J_gene IG_J_gene MGP_BALBcJ_T0015233.1 MGP_BALBcJ_G0013330.1 mouse_genomes_project 6 11061322 11061893 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015462.1 MGP_BALBcJ_G0013559.1 mouse_genomes_project 6 89592055 89592450 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078191.1 MGP_BALBcJ_G0030878.1 mouse_genomes_project 6 77613486 77613935 + MGP_BALBcJ_P0078191 Gm20594 protein_coding protein_coding MGP_BALBcJ_T0080827.1 MGP_BALBcJ_G0031432.1 mouse_genomes_project 6 139534351 139562739 + MGP_BALBcJ_P0080827 Gm11077 protein_coding protein_coding MGP_BALBcJ_T0001973.1 MGP_BALBcJ_G0001886.1 mouse_genomes_project 6 43208838 43213193 + TEC TEC MGP_BALBcJ_T0077777.1 MGP_BALBcJ_G0030776.1 mouse_genomes_project 6 54549803 54550703 + MGP_BALBcJ_P0077777 Vmn1r15 protein_coding protein_coding MGP_BALBcJ_T0008694.1 MGP_BALBcJ_G0007024.1 mouse_genomes_project 6 115783295 115783616 + Gm29509 lincRNA lincRNA MGP_BALBcJ_T0008763.1 MGP_BALBcJ_G0007075.1 mouse_genomes_project 6 146964630 146965837 - Gm17216 lincRNA lincRNA MGP_BALBcJ_T0079804.1 MGP_BALBcJ_G0031186.1 mouse_genomes_project 6 118424731 118446690 - MGP_BALBcJ_P0079804 Cecr5 protein_coding protein_coding MGP_BALBcJ_T0079805.1 MGP_BALBcJ_G0031186.1 mouse_genomes_project 6 118435245 118446675 - Cecr5 protein_coding retained_intron MGP_BALBcJ_T0079806.1 MGP_BALBcJ_G0031186.1 mouse_genomes_project 6 118436124 118446661 - Cecr5 protein_coding retained_intron MGP_BALBcJ_T0079807.1 MGP_BALBcJ_G0031186.1 mouse_genomes_project 6 118445338 118446673 - Cecr5 protein_coding retained_intron MGP_BALBcJ_T0078371.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81362718 81389721 - Stambp protein_coding retained_intron MGP_BALBcJ_T0078372.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81362724 81389727 - MGP_BALBcJ_P0078372 Stambp protein_coding protein_coding MGP_BALBcJ_T0078373.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81362731 81390036 - MGP_BALBcJ_P0078373 Stambp protein_coding protein_coding MGP_BALBcJ_T0078374.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81362861 81368908 - Stambp protein_coding retained_intron MGP_BALBcJ_T0078375.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81363266 81389711 - MGP_BALBcJ_P0078375 Stambp protein_coding protein_coding MGP_BALBcJ_T0078376.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81368332 81368736 - Stambp protein_coding retained_intron MGP_BALBcJ_T0078377.1 MGP_BALBcJ_G0030913.1 mouse_genomes_project 6 81388426 81389733 - Stambp protein_coding retained_intron MGP_BALBcJ_T0005027.1 MGP_BALBcJ_G0004294.1 mouse_genomes_project 6 100332667 100374397 + Gm44188 antisense antisense MGP_BALBcJ_T0005028.1 MGP_BALBcJ_G0004294.1 mouse_genomes_project 6 100332689 100405167 + Gm44188 antisense antisense MGP_BALBcJ_T0078921.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89202855 89264963 + MGP_BALBcJ_P0078921 Fbln2 protein_coding protein_coding MGP_BALBcJ_T0078922.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89202855 89264964 + MGP_BALBcJ_P0078922 Fbln2 protein_coding protein_coding MGP_BALBcJ_T0078923.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89203222 89224708 + MGP_BALBcJ_P0078923 Fbln2 protein_coding protein_coding MGP_BALBcJ_T0078924.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89203224 89224887 + MGP_BALBcJ_P0078924 Fbln2 protein_coding protein_coding MGP_BALBcJ_T0078925.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89203227 89204627 + Fbln2 protein_coding processed_transcript MGP_BALBcJ_T0078926.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89203231 89224907 + MGP_BALBcJ_P0078926 Fbln2 protein_coding protein_coding MGP_BALBcJ_T0078927.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89248424 89250250 + Fbln2 protein_coding retained_intron MGP_BALBcJ_T0078928.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89248827 89255822 + Fbln2 protein_coding retained_intron MGP_BALBcJ_T0078929.1 MGP_BALBcJ_G0031024.1 mouse_genomes_project 6 89258302 89264855 + Fbln2 protein_coding retained_intron MGP_BALBcJ_T0076539.1 MGP_BALBcJ_G0030483.1 mouse_genomes_project 6 21535608 21545282 + MGP_BALBcJ_P0076539 Spam1 protein_coding protein_coding MGP_BALBcJ_T0076540.1 MGP_BALBcJ_G0030483.1 mouse_genomes_project 6 21535621 21545282 + MGP_BALBcJ_P0076540 Spam1 protein_coding protein_coding MGP_BALBcJ_T0076541.1 MGP_BALBcJ_G0030483.1 mouse_genomes_project 6 21535635 21541292 + Spam1 protein_coding retained_intron MGP_BALBcJ_T0076542.1 MGP_BALBcJ_G0030483.1 mouse_genomes_project 6 21540065 21545282 + MGP_BALBcJ_P0076542 Spam1 protein_coding protein_coding MGP_BALBcJ_T0076412.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14433142 14567779 + St7 protein_coding retained_intron MGP_BALBcJ_T0076413.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434155 14693773 + MGP_BALBcJ_P0076413 St7 protein_coding protein_coding MGP_BALBcJ_T0076414.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434202 14693773 + MGP_BALBcJ_P0076414 St7 protein_coding protein_coding MGP_BALBcJ_T0076415.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434240 14693776 + MGP_BALBcJ_P0076415 St7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076416.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434240 14693717 + MGP_BALBcJ_P0076416 St7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076417.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434240 14693717 + MGP_BALBcJ_P0076417 St7 protein_coding protein_coding MGP_BALBcJ_T0076418.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434240 14602638 + MGP_BALBcJ_P0076418 St7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076419.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434240 14693717 + MGP_BALBcJ_P0076419 St7 protein_coding protein_coding MGP_BALBcJ_T0076420.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14434375 14693717 + MGP_BALBcJ_P0076420 St7 protein_coding protein_coding MGP_BALBcJ_T0076421.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14487419 14693717 + MGP_BALBcJ_P0076421 St7 protein_coding protein_coding MGP_BALBcJ_T0076422.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14487419 14693717 + MGP_BALBcJ_P0076422 St7 protein_coding protein_coding MGP_BALBcJ_T0076423.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14492996 14657783 + St7 protein_coding processed_transcript MGP_BALBcJ_T0076424.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14492996 14693776 + MGP_BALBcJ_P0076424 St7 protein_coding protein_coding MGP_BALBcJ_T0076425.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14493042 14693771 + MGP_BALBcJ_P0076425 St7 protein_coding protein_coding MGP_BALBcJ_T0076426.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14493118 14584449 + St7 protein_coding retained_intron MGP_BALBcJ_T0076427.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14493155 14693773 + St7 protein_coding retained_intron MGP_BALBcJ_T0076428.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14493218 14693752 + St7 protein_coding retained_intron MGP_BALBcJ_T0076429.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14588266 14596193 + St7 protein_coding processed_transcript MGP_BALBcJ_T0076430.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14588285 14656198 + St7 protein_coding processed_transcript MGP_BALBcJ_T0076431.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14602593 14657769 + St7 protein_coding processed_transcript MGP_BALBcJ_T0076432.1 MGP_BALBcJ_G0030454.1 mouse_genomes_project 6 14656859 14693686 + St7 protein_coding processed_transcript MGP_BALBcJ_T0101274.1 MGP_BALBcJ_G0039310.1 mouse_genomes_project 6 88844731 88844827 + Gm25185 snoRNA snoRNA MGP_BALBcJ_T0008642.1 MGP_BALBcJ_G0006985.1 mouse_genomes_project 6 86119972 86122258 - Gm44246 lincRNA lincRNA MGP_BALBcJ_T0015527.1 MGP_BALBcJ_G0013624.1 mouse_genomes_project 6 113010767 113011098 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077126.1 MGP_BALBcJ_G0030589.1 mouse_genomes_project 6 37362862 37397313 - MGP_BALBcJ_P0077126 E330009J07Rik protein_coding protein_coding MGP_BALBcJ_T0077127.1 MGP_BALBcJ_G0030589.1 mouse_genomes_project 6 37368987 37397311 - MGP_BALBcJ_P0077127 E330009J07Rik protein_coding protein_coding MGP_BALBcJ_T0077128.1 MGP_BALBcJ_G0030589.1 mouse_genomes_project 6 37379748 37392588 - MGP_BALBcJ_P0077128 E330009J07Rik protein_coding protein_coding MGP_BALBcJ_T0077129.1 MGP_BALBcJ_G0030589.1 mouse_genomes_project 6 37384678 37397293 - E330009J07Rik protein_coding retained_intron MGP_BALBcJ_T0078507.1 MGP_BALBcJ_G0030938.1 mouse_genomes_project 6 83567905 83569706 - MGP_BALBcJ_P0078507 Nat8f7 protein_coding protein_coding MGP_BALBcJ_T0000301.1 MGP_BALBcJ_G0000242.1 mouse_genomes_project 6 66989728 66990201 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0080678.1 MGP_BALBcJ_G0031406.1 mouse_genomes_project 6 135331579 135388048 - MGP_BALBcJ_P0080678 Plbd1 protein_coding protein_coding MGP_BALBcJ_T0080679.1 MGP_BALBcJ_G0031406.1 mouse_genomes_project 6 135332817 135387993 - Plbd1 protein_coding retained_intron MGP_BALBcJ_T0080680.1 MGP_BALBcJ_G0031406.1 mouse_genomes_project 6 135333390 135352696 - Plbd1 protein_coding retained_intron MGP_BALBcJ_T0080681.1 MGP_BALBcJ_G0031406.1 mouse_genomes_project 6 135359058 135387683 - MGP_BALBcJ_P0080681 Plbd1 protein_coding protein_coding MGP_BALBcJ_T0015608.1 MGP_BALBcJ_G0013705.1 mouse_genomes_project 6 130240203 130240413 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001996.1 MGP_BALBcJ_G0001909.1 mouse_genomes_project 6 68619568 68622017 - TEC TEC MGP_BALBcJ_T0008585.1 MGP_BALBcJ_G0006937.1 mouse_genomes_project 6 49692368 49699998 + 1700094M24Rik lincRNA lincRNA MGP_BALBcJ_T0079271.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111259041 111303031 + MGP_BALBcJ_P0079271 Mtmr14 protein_coding protein_coding MGP_BALBcJ_T0079272.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111259049 111292433 + MGP_BALBcJ_P0079272 Mtmr14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079273.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111259095 111303026 + MGP_BALBcJ_P0079273 Mtmr14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079274.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111260669 111278681 + MGP_BALBcJ_P0079274 Mtmr14 protein_coding protein_coding MGP_BALBcJ_T0079275.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111275753 111291148 + MGP_BALBcJ_P0079275 Mtmr14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079276.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111277486 111287679 + MGP_BALBcJ_P0079276 Mtmr14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079277.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111282280 111299574 + MGP_BALBcJ_P0079277 Mtmr14 protein_coding protein_coding MGP_BALBcJ_T0079278.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111287612 111302558 + MGP_BALBcJ_P0079278 Mtmr14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079279.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111287643 111302835 + MGP_BALBcJ_P0079279 Mtmr14 protein_coding protein_coding MGP_BALBcJ_T0079280.1 MGP_BALBcJ_G0031094.1 mouse_genomes_project 6 111291187 111302726 + MGP_BALBcJ_P0079280 Mtmr14 protein_coding protein_coding MGP_BALBcJ_T0079346.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111481560 111493817 + MGP_BALBcJ_P0079346 Il17re protein_coding protein_coding MGP_BALBcJ_T0079347.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111481837 111483951 + Il17re protein_coding retained_intron MGP_BALBcJ_T0079348.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111481883 111493456 + MGP_BALBcJ_P0079348 Il17re protein_coding protein_coding MGP_BALBcJ_T0079349.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111481910 111493433 + MGP_BALBcJ_P0079349 Il17re protein_coding protein_coding MGP_BALBcJ_T0079350.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111481971 111493202 + MGP_BALBcJ_P0079350 Il17re protein_coding protein_coding MGP_BALBcJ_T0079351.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111481971 111493202 + MGP_BALBcJ_P0079351 Il17re protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079352.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111487874 111493815 + Il17re protein_coding retained_intron MGP_BALBcJ_T0079353.1 MGP_BALBcJ_G0031105.1 mouse_genomes_project 6 111489418 111493046 + Il17re protein_coding retained_intron MGP_BALBcJ_T0077710.1 MGP_BALBcJ_G0030753.1 mouse_genomes_project 6 52570058 52582180 + MGP_BALBcJ_P0077710 Aqp1 protein_coding protein_coding MGP_BALBcJ_T0079321.1 MGP_BALBcJ_G0031100.1 mouse_genomes_project 6 111401038 111413429 + MGP_BALBcJ_P0079321 Arpc4 protein_coding protein_coding MGP_BALBcJ_T0079322.1 MGP_BALBcJ_G0031100.1 mouse_genomes_project 6 111401131 111411758 + MGP_BALBcJ_P0079322 Arpc4 protein_coding protein_coding MGP_BALBcJ_T0008695.1 MGP_BALBcJ_G0007025.1 mouse_genomes_project 6 116128960 116130718 - 1700069P05Rik lincRNA lincRNA MGP_BALBcJ_T0099057.1 MGP_BALBcJ_G0037094.1 mouse_genomes_project 6 38047894 38058221 + Gm37610 sense_overlapping sense_overlapping MGP_BALBcJ_T0079602.1 MGP_BALBcJ_G0031153.1 mouse_genomes_project 6 114536438 114541614 - MGP_BALBcJ_P0079602 Zfp422 protein_coding protein_coding MGP_BALBcJ_T0079603.1 MGP_BALBcJ_G0031153.1 mouse_genomes_project 6 114537303 114541316 - MGP_BALBcJ_P0079603 Zfp422 protein_coding protein_coding MGP_BALBcJ_T0079604.1 MGP_BALBcJ_G0031153.1 mouse_genomes_project 6 114537303 114541537 - MGP_BALBcJ_P0079604 Zfp422 protein_coding protein_coding MGP_BALBcJ_T0079605.1 MGP_BALBcJ_G0031153.1 mouse_genomes_project 6 114537321 114539206 - Zfp422 protein_coding processed_transcript MGP_BALBcJ_T0077421.1 MGP_BALBcJ_G0030686.1 mouse_genomes_project 6 45799060 45801661 + MGP_BALBcJ_P0077421 Gimap9 protein_coding protein_coding MGP_BALBcJ_T0077422.1 MGP_BALBcJ_G0030686.1 mouse_genomes_project 6 45800472 45802074 + MGP_BALBcJ_P0077422 Gimap9 protein_coding protein_coding MGP_BALBcJ_T0077480.1 MGP_BALBcJ_G0030701.1 mouse_genomes_project 6 46205342 46218627 + MGP_BALBcJ_P0077480 Malsu1 protein_coding protein_coding MGP_BALBcJ_T0077481.1 MGP_BALBcJ_G0030701.1 mouse_genomes_project 6 46205395 46218627 + MGP_BALBcJ_P0077481 Malsu1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077482.1 MGP_BALBcJ_G0030701.1 mouse_genomes_project 6 46205439 46212004 + Malsu1 protein_coding processed_transcript MGP_BALBcJ_T0077483.1 MGP_BALBcJ_G0030701.1 mouse_genomes_project 6 46205621 46215410 + Malsu1 protein_coding processed_transcript MGP_BALBcJ_T0077484.1 MGP_BALBcJ_G0030701.1 mouse_genomes_project 6 46214460 46216554 + Malsu1 protein_coding retained_intron MGP_BALBcJ_T0000282.1 MGP_BALBcJ_G0000223.1 mouse_genomes_project 6 65886191 65886489 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0080995.1 MGP_BALBcJ_G0031466.1 mouse_genomes_project 6 144662981 144670287 - MGP_BALBcJ_P0080995 Bhlhe41 protein_coding protein_coding MGP_BALBcJ_T0080996.1 MGP_BALBcJ_G0031466.1 mouse_genomes_project 6 144668233 144670031 - MGP_BALBcJ_P0080996 Bhlhe41 protein_coding protein_coding MGP_BALBcJ_T0080997.1 MGP_BALBcJ_G0031466.1 mouse_genomes_project 6 144669391 144670081 - Bhlhe41 protein_coding retained_intron MGP_BALBcJ_T0076586.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25270075 25678709 + MGP_BALBcJ_P0076586 Snd1 protein_coding protein_coding MGP_BALBcJ_T0076587.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25270075 25667635 + MGP_BALBcJ_P0076587 Snd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076588.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25270086 25720031 + MGP_BALBcJ_P0076588 Snd1 protein_coding protein_coding MGP_BALBcJ_T0076589.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25270156 25272576 + Snd1 protein_coding retained_intron MGP_BALBcJ_T0076590.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25270292 25586706 + MGP_BALBcJ_P0076590 Snd1 protein_coding protein_coding MGP_BALBcJ_T0076591.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25350489 25513252 + Snd1 protein_coding processed_transcript MGP_BALBcJ_T0076593.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25493184 25495363 + Snd1 protein_coding processed_transcript MGP_BALBcJ_T0076594.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25493995 25513262 + Snd1 protein_coding processed_transcript MGP_BALBcJ_T0076595.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25553385 25664899 + Snd1 protein_coding processed_transcript MGP_BALBcJ_T0076596.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25565940 25670145 + Snd1 protein_coding processed_transcript MGP_BALBcJ_T0076598.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25638807 25670220 + Snd1 protein_coding processed_transcript MGP_BALBcJ_T0076599.1 MGP_BALBcJ_G0030494.1 mouse_genomes_project 6 25669954 25676404 + Snd1 protein_coding retained_intron MGP_BALBcJ_T0015211.1 MGP_BALBcJ_G0013308.1 mouse_genomes_project 6 3456895 3457960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010797.1 MGP_BALBcJ_G0008922.1 mouse_genomes_project 6 126192806 126192916 - Gm26338 miRNA miRNA MGP_BALBcJ_T0010785.1 MGP_BALBcJ_G0008910.1 mouse_genomes_project 6 115974812 115974884 + Mir7044 miRNA miRNA MGP_BALBcJ_T0008542.1 MGP_BALBcJ_G0006910.1 mouse_genomes_project 6 32472079 32476660 - Gm42931 lincRNA lincRNA MGP_BALBcJ_T0000127.1 MGP_BALBcJ_G0000097.1 mouse_genomes_project 6 65316266 65317003 - MGP_BALBcJ_P0000127 Igkv1-131 IG_V_gene IG_V_gene MGP_BALBcJ_T0015341.1 MGP_BALBcJ_G0013438.1 mouse_genomes_project 6 56172445 56172691 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077244.1 MGP_BALBcJ_G0030633.1 mouse_genomes_project 6 39387202 39388084 + MGP_BALBcJ_P0077244 Tas2r143 protein_coding protein_coding MGP_BALBcJ_T0005604.1 MGP_BALBcJ_G0004722.1 mouse_genomes_project 6 85590908 85597813 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005605.1 MGP_BALBcJ_G0004722.1 mouse_genomes_project 6 85590956 85599551 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005606.1 MGP_BALBcJ_G0004722.1 mouse_genomes_project 6 85590956 85598764 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0008511.1 MGP_BALBcJ_G0006888.1 mouse_genomes_project 6 27702449 27743559 + 4930412F09Rik lincRNA lincRNA MGP_BALBcJ_T0002158.1 MGP_BALBcJ_G0002070.1 mouse_genomes_project 6 135606514 135607022 - TEC TEC MGP_BALBcJ_T0004891.1 MGP_BALBcJ_G0004202.1 mouse_genomes_project 6 15166469 15169671 + Gm15594 antisense antisense MGP_BALBcJ_T0015397.1 MGP_BALBcJ_G0013494.1 mouse_genomes_project 6 65729381 65729672 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011629.1 MGP_BALBcJ_G0009754.1 mouse_genomes_project 6 49445761 49445938 + Gm27543 misc_RNA misc_RNA MGP_BALBcJ_T0010803.1 MGP_BALBcJ_G0008928.1 mouse_genomes_project 6 136724926 136725040 - Gm24308 miRNA miRNA MGP_BALBcJ_T0010773.1 MGP_BALBcJ_G0008898.1 mouse_genomes_project 6 97123981 97124128 - miRNA miRNA MGP_BALBcJ_T0004950.1 MGP_BALBcJ_G0004249.1 mouse_genomes_project 6 64636861 64699885 - antisense antisense MGP_BALBcJ_T0015427.1 MGP_BALBcJ_G0013524.1 mouse_genomes_project 6 76286760 76287732 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100009.1 MGP_BALBcJ_G0038045.1 mouse_genomes_project 6 64482122 64482256 + Gm25260 snRNA snRNA MGP_BALBcJ_T0015280.1 MGP_BALBcJ_G0013377.1 mouse_genomes_project 6 36790188 36790762 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079557.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117144 114170620 + MGP_BALBcJ_P0079557 Fam21 protein_coding protein_coding MGP_BALBcJ_T0079558.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117152 114163005 + MGP_BALBcJ_P0079558 Fam21 protein_coding protein_coding MGP_BALBcJ_T0079559.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117162 114129651 + MGP_BALBcJ_P0079559 Fam21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079560.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117201 114118429 + Fam21 protein_coding retained_intron MGP_BALBcJ_T0079561.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117228 114123074 + MGP_BALBcJ_P0079561 Fam21 protein_coding protein_coding MGP_BALBcJ_T0079562.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117243 114125251 + MGP_BALBcJ_P0079562 Fam21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079563.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117312 114170599 + Fam21 protein_coding retained_intron MGP_BALBcJ_T0079564.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114117622 114166916 + MGP_BALBcJ_P0079564 Fam21 protein_coding protein_coding MGP_BALBcJ_T0079565.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114129655 114134195 + Fam21 protein_coding retained_intron MGP_BALBcJ_T0079566.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114130980 114136689 + MGP_BALBcJ_P0079566 Fam21 protein_coding protein_coding MGP_BALBcJ_T0079567.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114135241 114139072 + Fam21 protein_coding retained_intron MGP_BALBcJ_T0079568.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114163738 114164761 + Fam21 protein_coding retained_intron MGP_BALBcJ_T0079569.1 MGP_BALBcJ_G0031143.1 mouse_genomes_project 6 114164488 114166901 + Fam21 protein_coding retained_intron MGP_BALBcJ_T0077062.1 MGP_BALBcJ_G0030576.1 mouse_genomes_project 6 36020086 36052165 - MGP_BALBcJ_P0077062 Parp12 protein_coding protein_coding MGP_BALBcJ_T0077063.1 MGP_BALBcJ_G0030576.1 mouse_genomes_project 6 36022680 36024758 - Parp12 protein_coding retained_intron MGP_BALBcJ_T0002132.1 MGP_BALBcJ_G0002044.1 mouse_genomes_project 6 120870293 120872661 + TEC TEC MGP_BALBcJ_T0008568.1 MGP_BALBcJ_G0006926.1 mouse_genomes_project 6 47931857 47970922 + C530044C16Rik lincRNA lincRNA MGP_BALBcJ_T0008569.1 MGP_BALBcJ_G0006926.1 mouse_genomes_project 6 47932066 47971061 + C530044C16Rik lincRNA lincRNA MGP_BALBcJ_T0005090.1 MGP_BALBcJ_G0004345.1 mouse_genomes_project 6 137389371 137408624 + B230110G15Rik antisense antisense MGP_BALBcJ_T0077987.1 MGP_BALBcJ_G0030839.1 mouse_genomes_project 6 69131696 69183900 - MGP_BALBcJ_P0077987 Rmnd5a protein_coding protein_coding MGP_BALBcJ_T0077988.1 MGP_BALBcJ_G0030839.1 mouse_genomes_project 6 69133527 69139343 - Rmnd5a protein_coding processed_transcript MGP_BALBcJ_T0077989.1 MGP_BALBcJ_G0030839.1 mouse_genomes_project 6 69134394 69139248 - Rmnd5a protein_coding processed_transcript MGP_BALBcJ_T0077990.1 MGP_BALBcJ_G0030839.1 mouse_genomes_project 6 69137520 69140259 - Rmnd5a protein_coding retained_intron MGP_BALBcJ_T0078663.1 MGP_BALBcJ_G0030967.1 mouse_genomes_project 6 85063283 85257279 - MGP_BALBcJ_P0078663 Antxr1 protein_coding protein_coding MGP_BALBcJ_T0078664.1 MGP_BALBcJ_G0030967.1 mouse_genomes_project 6 85063286 85230414 - MGP_BALBcJ_P0078664 Antxr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078665.1 MGP_BALBcJ_G0030967.1 mouse_genomes_project 6 85087394 85257239 - MGP_BALBcJ_P0078665 Antxr1 protein_coding protein_coding MGP_BALBcJ_T0078666.1 MGP_BALBcJ_G0030967.1 mouse_genomes_project 6 85108173 85257279 - MGP_BALBcJ_P0078666 Antxr1 protein_coding protein_coding MGP_BALBcJ_T0078667.1 MGP_BALBcJ_G0030967.1 mouse_genomes_project 6 85127474 85192227 - Antxr1 protein_coding processed_transcript MGP_BALBcJ_T0078668.1 MGP_BALBcJ_G0030967.1 mouse_genomes_project 6 85202512 85257336 - Antxr1 protein_coding retained_intron MGP_BALBcJ_T0080538.1 MGP_BALBcJ_G0031356.1 mouse_genomes_project 6 130057853 130058780 - MGP_BALBcJ_P0080538 Tas2r106 protein_coding protein_coding MGP_BALBcJ_T0015363.1 MGP_BALBcJ_G0013460.1 mouse_genomes_project 6 62701505 62702906 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002115.1 MGP_BALBcJ_G0002028.1 mouse_genomes_project 6 111327235 111328285 - TEC TEC MGP_BALBcJ_T0015440.1 MGP_BALBcJ_G0013537.1 mouse_genomes_project 6 81731401 81731765 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101288.1 MGP_BALBcJ_G0039324.1 mouse_genomes_project 6 121480672 121480804 - Gm22722 snoRNA snoRNA MGP_BALBcJ_T0079127.1 MGP_BALBcJ_G0031064.1 mouse_genomes_project 6 97767478 97782576 - MGP_BALBcJ_P0079127 Prok2 protein_coding protein_coding MGP_BALBcJ_T0079128.1 MGP_BALBcJ_G0031064.1 mouse_genomes_project 6 97767529 97782537 - MGP_BALBcJ_P0079128 Prok2 protein_coding protein_coding MGP_BALBcJ_T0079129.1 MGP_BALBcJ_G0031064.1 mouse_genomes_project 6 97768199 97782567 - MGP_BALBcJ_P0079129 Prok2 protein_coding protein_coding MGP_BALBcJ_T0079130.1 MGP_BALBcJ_G0031064.1 mouse_genomes_project 6 97778277 97782576 - MGP_BALBcJ_P0079130 Prok2 protein_coding protein_coding MGP_BALBcJ_T0101277.1 MGP_BALBcJ_G0039313.1 mouse_genomes_project 6 91939855 91939991 + Gm22840 snoRNA snoRNA MGP_BALBcJ_T0080013.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122747662 122789440 + Lpcat3 protein_coding retained_intron MGP_BALBcJ_T0080014.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122747662 122789488 + MGP_BALBcJ_P0080014 Lpcat3 protein_coding protein_coding MGP_BALBcJ_T0080015.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122747807 122787360 + MGP_BALBcJ_P0080015 Lpcat3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080016.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122747816 122784571 + Lpcat3 protein_coding retained_intron MGP_BALBcJ_T0080017.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122747850 122785630 + Lpcat3 protein_coding retained_intron MGP_BALBcJ_T0080018.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122786488 122787683 + Lpcat3 protein_coding retained_intron MGP_BALBcJ_T0080019.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122787326 122788128 + Lpcat3 protein_coding processed_transcript MGP_BALBcJ_T0080020.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122787824 122788998 + Lpcat3 protein_coding retained_intron MGP_BALBcJ_T0080021.1 MGP_BALBcJ_G0031237.1 mouse_genomes_project 6 122788074 122789087 + Lpcat3 protein_coding retained_intron MGP_BALBcJ_T0002088.1 MGP_BALBcJ_G0002001.1 mouse_genomes_project 6 91489268 91489751 - TEC TEC MGP_BALBcJ_T0101267.1 MGP_BALBcJ_G0039303.1 mouse_genomes_project 6 68589051 68589187 + Gm23346 snoRNA snoRNA MGP_BALBcJ_T0002717.1 MGP_BALBcJ_G0002593.1 mouse_genomes_project 6 38193689 38193962 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0102660.1 MGP_BALBcJ_G0040475.1 mouse_genomes_project 6 131249104 131250033 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015330.1 MGP_BALBcJ_G0013427.1 mouse_genomes_project 6 50252436 50252976 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010788.1 MGP_BALBcJ_G0008913.1 mouse_genomes_project 6 118715430 118715527 - Gm25193 miRNA miRNA MGP_BALBcJ_T0015656.1 MGP_BALBcJ_G0013753.1 mouse_genomes_project 6 147760182 147760594 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008700.1 MGP_BALBcJ_G0007030.1 mouse_genomes_project 6 119177740 119195228 - Gm44148 lincRNA lincRNA MGP_BALBcJ_T0078973.1 MGP_BALBcJ_G0031033.1 mouse_genomes_project 6 89926715 89928619 + 4930590J08Rik protein_coding retained_intron MGP_BALBcJ_T0078974.1 MGP_BALBcJ_G0031033.1 mouse_genomes_project 6 89928139 89975442 + MGP_BALBcJ_P0078974 4930590J08Rik protein_coding protein_coding MGP_BALBcJ_T0078975.1 MGP_BALBcJ_G0031033.1 mouse_genomes_project 6 89939503 89975357 + MGP_BALBcJ_P0078975 4930590J08Rik protein_coding protein_coding MGP_BALBcJ_T0078976.1 MGP_BALBcJ_G0031033.1 mouse_genomes_project 6 89968980 89974747 + MGP_BALBcJ_P0078976 4930590J08Rik protein_coding protein_coding MGP_BALBcJ_T0077682.1 MGP_BALBcJ_G0030747.1 mouse_genomes_project 6 52154975 52205175 - MGP_BALBcJ_P0077682 Nod1 protein_coding protein_coding MGP_BALBcJ_T0077683.1 MGP_BALBcJ_G0030747.1 mouse_genomes_project 6 52154975 52206126 - MGP_BALBcJ_P0077683 Nod1 protein_coding protein_coding MGP_BALBcJ_T0077684.1 MGP_BALBcJ_G0030747.1 mouse_genomes_project 6 52155785 52159125 - Nod1 protein_coding processed_transcript MGP_BALBcJ_T0077685.1 MGP_BALBcJ_G0030747.1 mouse_genomes_project 6 52159115 52174439 - MGP_BALBcJ_P0077685 Nod1 protein_coding protein_coding MGP_BALBcJ_T0077686.1 MGP_BALBcJ_G0030747.1 mouse_genomes_project 6 52168339 52170837 - Nod1 protein_coding processed_transcript MGP_BALBcJ_T0077687.1 MGP_BALBcJ_G0030747.1 mouse_genomes_project 6 52180459 52198389 - MGP_BALBcJ_P0077687 Nod1 protein_coding protein_coding MGP_BALBcJ_T0015253.1 MGP_BALBcJ_G0013350.1 mouse_genomes_project 6 19523252 19524438 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102633.1 MGP_BALBcJ_G0040449.1 mouse_genomes_project 6 84045063 84046106 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0077451.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45959742 45967013 - MGP_BALBcJ_P0077451 Tmem176b protein_coding protein_coding MGP_BALBcJ_T0077452.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45960538 45966685 - MGP_BALBcJ_P0077452 Tmem176b protein_coding protein_coding MGP_BALBcJ_T0077453.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45961367 45967002 - MGP_BALBcJ_P0077453 Tmem176b protein_coding protein_coding MGP_BALBcJ_T0077454.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45961367 45967420 - MGP_BALBcJ_P0077454 Tmem176b protein_coding protein_coding MGP_BALBcJ_T0077455.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45961369 45966672 - MGP_BALBcJ_P0077455 Tmem176b protein_coding protein_coding MGP_BALBcJ_T0077456.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45961436 45966519 - MGP_BALBcJ_P0077456 Tmem176b protein_coding protein_coding MGP_BALBcJ_T0077457.1 MGP_BALBcJ_G0030694.1 mouse_genomes_project 6 45961721 45966379 - Tmem176b protein_coding retained_intron MGP_BALBcJ_T0077401.1 MGP_BALBcJ_G0030680.1 mouse_genomes_project 6 45710506 45733620 + MGP_BALBcJ_P0077401 Gm45021 protein_coding protein_coding MGP_BALBcJ_T0002186.1 MGP_BALBcJ_G0002098.1 mouse_genomes_project 6 148039189 148041944 - TEC TEC MGP_BALBcJ_T0015567.1 MGP_BALBcJ_G0013664.1 mouse_genomes_project 6 123291718 123292038 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102646.1 MGP_BALBcJ_G0040462.1 mouse_genomes_project 6 122170520 122197649 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008619.1 MGP_BALBcJ_G0006968.1 mouse_genomes_project 6 79706675 79713884 - 1700009C05Rik lincRNA lincRNA MGP_BALBcJ_T0010760.1 MGP_BALBcJ_G0008885.1 mouse_genomes_project 6 79701808 79701882 - Mir7232 miRNA miRNA MGP_BALBcJ_T0002653.1 MGP_BALBcJ_G0002539.1 mouse_genomes_project 6 38082446 38082908 + MGP_BALBcJ_P0002653 Trbv13-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0002654.1 MGP_BALBcJ_G0002539.1 mouse_genomes_project 6 38082475 38082908 + MGP_BALBcJ_P0002654 Trbv13-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0005046.1 MGP_BALBcJ_G0004307.1 mouse_genomes_project 6 113738292 113744585 + antisense antisense MGP_BALBcJ_T0015419.1 MGP_BALBcJ_G0013516.1 mouse_genomes_project 6 72954564 72955065 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080543.1 MGP_BALBcJ_G0031361.1 mouse_genomes_project 6 130802214 130805412 - MGP_BALBcJ_P0080543 Prpmp5 protein_coding protein_coding MGP_BALBcJ_T0015543.1 MGP_BALBcJ_G0013640.1 mouse_genomes_project 6 118822274 118822587 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001961.1 MGP_BALBcJ_G0001874.1 mouse_genomes_project 6 42351078 42352483 + TEC TEC MGP_BALBcJ_T0080558.1 MGP_BALBcJ_G0031375.1 mouse_genomes_project 6 131277676 131278678 - MGP_BALBcJ_P0080558 Tas2r110 protein_coding protein_coding MGP_BALBcJ_T0002711.1 MGP_BALBcJ_G0002587.1 mouse_genomes_project 6 38058177 38058466 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0002084.1 MGP_BALBcJ_G0001997.1 mouse_genomes_project 6 90167448 90169979 - TEC TEC MGP_BALBcJ_T0002017.1 MGP_BALBcJ_G0001930.1 mouse_genomes_project 6 75225367 75229486 - TEC TEC MGP_BALBcJ_T0077385.1 MGP_BALBcJ_G0030676.1 mouse_genomes_project 6 45657896 45662122 + MGP_BALBcJ_P0077385 Atp6v0e2 protein_coding protein_coding MGP_BALBcJ_T0077386.1 MGP_BALBcJ_G0030676.1 mouse_genomes_project 6 45657919 45660187 + Atp6v0e2 protein_coding retained_intron MGP_BALBcJ_T0077387.1 MGP_BALBcJ_G0030676.1 mouse_genomes_project 6 45657946 45662122 + MGP_BALBcJ_P0077387 Atp6v0e2 protein_coding protein_coding MGP_BALBcJ_T0078943.1 MGP_BALBcJ_G0031029.1 mouse_genomes_project 6 89509616 89516310 + MGP_BALBcJ_P0078943 Lsm3 protein_coding protein_coding MGP_BALBcJ_T0078944.1 MGP_BALBcJ_G0031029.1 mouse_genomes_project 6 89509645 89513526 + Lsm3 protein_coding retained_intron MGP_BALBcJ_T0078945.1 MGP_BALBcJ_G0031029.1 mouse_genomes_project 6 89509665 89511693 + Lsm3 protein_coding retained_intron MGP_BALBcJ_T0078946.1 MGP_BALBcJ_G0031029.1 mouse_genomes_project 6 89509735 89511204 + Lsm3 protein_coding retained_intron MGP_BALBcJ_T0078947.1 MGP_BALBcJ_G0031029.1 mouse_genomes_project 6 89509736 89516305 + MGP_BALBcJ_P0078947 Lsm3 protein_coding protein_coding MGP_BALBcJ_T0010738.1 MGP_BALBcJ_G0008863.1 mouse_genomes_project 6 26982196 26982266 - Mir183 miRNA miRNA MGP_BALBcJ_T0018213.1 MGP_BALBcJ_G0015566.1 mouse_genomes_project 6 45861874 45864139 - Gimap1os processed_transcript antisense MGP_BALBcJ_T0018214.1 MGP_BALBcJ_G0015566.1 mouse_genomes_project 6 45863018 45864962 - Gimap1os processed_transcript retained_intron MGP_BALBcJ_T0077707.1 MGP_BALBcJ_G0030752.1 mouse_genomes_project 6 52444066 52553884 + MGP_BALBcJ_P0077707 Fam188b protein_coding protein_coding MGP_BALBcJ_T0077708.1 MGP_BALBcJ_G0030752.1 mouse_genomes_project 6 52444066 52512549 + MGP_BALBcJ_P0077708 Fam188b protein_coding protein_coding MGP_BALBcJ_T0077709.1 MGP_BALBcJ_G0030752.1 mouse_genomes_project 6 52512078 52551977 + Fam188b protein_coding processed_transcript MGP_BALBcJ_T0080552.1 MGP_BALBcJ_G0031369.1 mouse_genomes_project 6 131143458 131144442 - MGP_BALBcJ_P0080552 Tas2r136 protein_coding protein_coding MGP_BALBcJ_T0008565.1 MGP_BALBcJ_G0006924.1 mouse_genomes_project 6 45986575 45992319 + Gm7932 lincRNA lincRNA MGP_BALBcJ_T0008566.1 MGP_BALBcJ_G0006924.1 mouse_genomes_project 6 45986670 45990680 + Gm7932 lincRNA lincRNA MGP_BALBcJ_T0004904.1 MGP_BALBcJ_G0004213.1 mouse_genomes_project 6 29885765 29890520 + Gm14540 antisense antisense MGP_BALBcJ_T0080570.1 MGP_BALBcJ_G0031384.1 mouse_genomes_project 6 132676287 132912287 + MGP_BALBcJ_P0080570 Etv6 protein_coding protein_coding MGP_BALBcJ_T0080571.1 MGP_BALBcJ_G0031384.1 mouse_genomes_project 6 132676555 132890496 + MGP_BALBcJ_P0080571 Etv6 protein_coding protein_coding MGP_BALBcJ_T0080572.1 MGP_BALBcJ_G0031384.1 mouse_genomes_project 6 132777764 132912294 + MGP_BALBcJ_P0080572 Etv6 protein_coding protein_coding MGP_BALBcJ_T0080573.1 MGP_BALBcJ_G0031384.1 mouse_genomes_project 6 132875808 132904135 + Etv6 protein_coding retained_intron MGP_BALBcJ_T0080574.1 MGP_BALBcJ_G0031384.1 mouse_genomes_project 6 132889776 132890769 + Etv6 protein_coding processed_transcript MGP_BALBcJ_T0101305.1 MGP_BALBcJ_G0039341.1 mouse_genomes_project 6 144272603 144272718 + Gm25373 snoRNA snoRNA MGP_BALBcJ_T0002053.1 MGP_BALBcJ_G0001966.1 mouse_genomes_project 6 85243511 85244293 - TEC TEC MGP_BALBcJ_T0005094.1 MGP_BALBcJ_G0004349.1 mouse_genomes_project 6 142816227 142818098 + Sox5os1 antisense antisense MGP_BALBcJ_T0001906.1 MGP_BALBcJ_G0001819.1 mouse_genomes_project 6 1327949 1328886 + TEC TEC MGP_BALBcJ_T0076760.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27297749 27328428 - MGP_BALBcJ_P0076760 Tmem209 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076761.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27299493 27328439 - MGP_BALBcJ_P0076761 Tmem209 protein_coding protein_coding MGP_BALBcJ_T0076762.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27299718 27328440 - MGP_BALBcJ_P0076762 Tmem209 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076763.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27299924 27328507 - MGP_BALBcJ_P0076763 Tmem209 protein_coding protein_coding MGP_BALBcJ_T0076764.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27301111 27328442 - MGP_BALBcJ_P0076764 Tmem209 protein_coding protein_coding MGP_BALBcJ_T0076765.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27301497 27328439 - MGP_BALBcJ_P0076765 Tmem209 protein_coding protein_coding MGP_BALBcJ_T0076766.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27309046 27310870 - Tmem209 protein_coding retained_intron MGP_BALBcJ_T0076767.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27320693 27328473 - MGP_BALBcJ_P0076767 Tmem209 protein_coding protein_coding MGP_BALBcJ_T0076768.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27323472 27328446 - Tmem209 protein_coding retained_intron MGP_BALBcJ_T0076769.1 MGP_BALBcJ_G0030520.1 mouse_genomes_project 6 27324475 27328448 - MGP_BALBcJ_P0076769 Tmem209 protein_coding protein_coding MGP_BALBcJ_T0080230.1 MGP_BALBcJ_G0031270.1 mouse_genomes_project 6 123307252 123315189 - MGP_BALBcJ_P0080230 Tapbpl protein_coding protein_coding MGP_BALBcJ_T0008621.1 MGP_BALBcJ_G0006970.1 mouse_genomes_project 6 79793182 79794173 - Gm44202 lincRNA lincRNA MGP_BALBcJ_T0079660.1 MGP_BALBcJ_G0031166.1 mouse_genomes_project 6 116320565 116345319 - MGP_BALBcJ_P0079660 Zfp248 protein_coding protein_coding MGP_BALBcJ_T0079661.1 MGP_BALBcJ_G0031166.1 mouse_genomes_project 6 116324906 116345880 - Zfp248 protein_coding processed_transcript MGP_BALBcJ_T0079662.1 MGP_BALBcJ_G0031166.1 mouse_genomes_project 6 116324984 116345526 - MGP_BALBcJ_P0079662 Zfp248 protein_coding protein_coding MGP_BALBcJ_T0079663.1 MGP_BALBcJ_G0031166.1 mouse_genomes_project 6 116343559 116345963 - Zfp248 protein_coding retained_intron MGP_BALBcJ_T0079664.1 MGP_BALBcJ_G0031166.1 mouse_genomes_project 6 116343592 116345932 - Zfp248 protein_coding retained_intron MGP_BALBcJ_T0079665.1 MGP_BALBcJ_G0031166.1 mouse_genomes_project 6 116343628 116345217 - Zfp248 protein_coding processed_transcript MGP_BALBcJ_T0077995.1 MGP_BALBcJ_G0030841.1 mouse_genomes_project 6 69290907 69308351 + Chmp3 protein_coding processed_transcript MGP_BALBcJ_T0077996.1 MGP_BALBcJ_G0030841.1 mouse_genomes_project 6 69290984 69324990 + MGP_BALBcJ_P0077996 Chmp3 protein_coding protein_coding MGP_BALBcJ_T0077997.1 MGP_BALBcJ_G0030841.1 mouse_genomes_project 6 69290984 69308370 + MGP_BALBcJ_P0077997 Chmp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077998.1 MGP_BALBcJ_G0030841.1 mouse_genomes_project 6 69291044 69329804 + MGP_BALBcJ_P0077998 Chmp3 protein_coding protein_coding MGP_BALBcJ_T0077999.1 MGP_BALBcJ_G0030841.1 mouse_genomes_project 6 69291408 69321325 + Chmp3 protein_coding processed_transcript MGP_BALBcJ_T0078000.1 MGP_BALBcJ_G0030841.1 mouse_genomes_project 6 69324786 69327007 + Chmp3 protein_coding retained_intron MGP_BALBcJ_T0102600.1 MGP_BALBcJ_G0040416.1 mouse_genomes_project 6 37985198 37985840 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015385.1 MGP_BALBcJ_G0013482.1 mouse_genomes_project 6 64711957 64713031 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008716.1 MGP_BALBcJ_G0007046.1 mouse_genomes_project 6 127017923 127020898 - Gm44067 lincRNA lincRNA MGP_BALBcJ_T0078977.1 MGP_BALBcJ_G0031034.1 mouse_genomes_project 6 90004042 90100037 + MGP_BALBcJ_P0078977 Fgd5 protein_coding protein_coding MGP_BALBcJ_T0078978.1 MGP_BALBcJ_G0031034.1 mouse_genomes_project 6 90092859 90101435 + Fgd5 protein_coding retained_intron MGP_BALBcJ_T0078979.1 MGP_BALBcJ_G0031034.1 mouse_genomes_project 6 90096618 90099646 + Fgd5 protein_coding retained_intron MGP_BALBcJ_T0005076.1 MGP_BALBcJ_G0004333.1 mouse_genomes_project 6 127244891 127247339 - Gm44000 antisense antisense MGP_BALBcJ_T0015240.1 MGP_BALBcJ_G0013337.1 mouse_genomes_project 6 15035855 15036816 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077414.1 MGP_BALBcJ_G0030684.1 mouse_genomes_project 6 45747113 45754036 + MGP_BALBcJ_P0077414 AI854703 protein_coding protein_coding MGP_BALBcJ_T0077415.1 MGP_BALBcJ_G0030684.1 mouse_genomes_project 6 45747569 45749810 + MGP_BALBcJ_P0077415 AI854703 protein_coding protein_coding MGP_BALBcJ_T0077416.1 MGP_BALBcJ_G0030684.1 mouse_genomes_project 6 45747627 45749810 + MGP_BALBcJ_P0077416 AI854703 protein_coding protein_coding MGP_BALBcJ_T0077417.1 MGP_BALBcJ_G0030684.1 mouse_genomes_project 6 45748281 45754040 + MGP_BALBcJ_P0077417 AI854703 protein_coding protein_coding MGP_BALBcJ_T0076530.1 MGP_BALBcJ_G0030478.1 mouse_genomes_project 6 21274812 21317998 + MGP_BALBcJ_P0076530 Asb15 protein_coding protein_coding MGP_BALBcJ_T0076531.1 MGP_BALBcJ_G0030478.1 mouse_genomes_project 6 21303066 21320178 + MGP_BALBcJ_P0076531 Asb15 protein_coding protein_coding MGP_BALBcJ_T0005098.1 MGP_BALBcJ_G0004352.1 mouse_genomes_project 6 143519472 143558823 + Sox5os4 antisense antisense MGP_BALBcJ_T0015572.1 MGP_BALBcJ_G0013669.1 mouse_genomes_project 6 125069169 125069898 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080332.1 MGP_BALBcJ_G0031293.1 mouse_genomes_project 6 125639607 125709428 + MGP_BALBcJ_P0080332 Cracr2a protein_coding protein_coding MGP_BALBcJ_T0080333.1 MGP_BALBcJ_G0031293.1 mouse_genomes_project 6 125656254 125709333 + MGP_BALBcJ_P0080333 Cracr2a protein_coding protein_coding MGP_BALBcJ_T0002064.1 MGP_BALBcJ_G0001977.1 mouse_genomes_project 6 86454310 86455305 + TEC TEC MGP_BALBcJ_T0080246.1 MGP_BALBcJ_G0031274.1 mouse_genomes_project 6 123432715 123433396 + Tnfrsf1a protein_coding processed_transcript MGP_BALBcJ_T0080247.1 MGP_BALBcJ_G0031274.1 mouse_genomes_project 6 123432811 123440896 + MGP_BALBcJ_P0080247 Tnfrsf1a protein_coding protein_coding MGP_BALBcJ_T0080248.1 MGP_BALBcJ_G0031274.1 mouse_genomes_project 6 123433083 123446076 + MGP_BALBcJ_P0080248 Tnfrsf1a protein_coding protein_coding MGP_BALBcJ_T0080249.1 MGP_BALBcJ_G0031274.1 mouse_genomes_project 6 123440950 123444696 + MGP_BALBcJ_P0080249 Tnfrsf1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080250.1 MGP_BALBcJ_G0031274.1 mouse_genomes_project 6 123441350 123445369 + MGP_BALBcJ_P0080250 Tnfrsf1a protein_coding protein_coding MGP_BALBcJ_T0080251.1 MGP_BALBcJ_G0031274.1 mouse_genomes_project 6 123444017 123445465 + Tnfrsf1a protein_coding retained_intron MGP_BALBcJ_T0001939.1 MGP_BALBcJ_G0001852.1 mouse_genomes_project 6 26985419 26987641 + TEC TEC MGP_BALBcJ_T0001934.1 MGP_BALBcJ_G0001847.1 mouse_genomes_project 6 25352162 25354034 + TEC TEC MGP_BALBcJ_T0080632.1 MGP_BALBcJ_G0031395.1 mouse_genomes_project 6 133716302 133738948 + MGP_BALBcJ_P0080632 Gprc5a protein_coding protein_coding MGP_BALBcJ_T0002664.1 MGP_BALBcJ_G0002549.1 mouse_genomes_project 6 38173144 38173637 + MGP_BALBcJ_P0002664 Trbv21 TR_V_gene TR_V_gene MGP_BALBcJ_T0002665.1 MGP_BALBcJ_G0002549.1 mouse_genomes_project 6 38173349 38173639 + MGP_BALBcJ_P0002665 Trbv21 TR_V_gene TR_V_gene MGP_BALBcJ_T0002107.1 MGP_BALBcJ_G0002020.1 mouse_genomes_project 6 101625429 101627900 + TEC TEC MGP_BALBcJ_T0015252.1 MGP_BALBcJ_G0013349.1 mouse_genomes_project 6 19500372 19501140 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099989.1 MGP_BALBcJ_G0038025.1 mouse_genomes_project 6 16362130 16362237 + Gm22828 snRNA snRNA MGP_BALBcJ_T0101257.1 MGP_BALBcJ_G0039293.1 mouse_genomes_project 6 53836578 53836710 - Gm22493 snoRNA snoRNA MGP_BALBcJ_T0078684.1 MGP_BALBcJ_G0030975.1 mouse_genomes_project 6 85649997 85653126 + Efcc1 protein_coding retained_intron MGP_BALBcJ_T0078685.1 MGP_BALBcJ_G0030975.1 mouse_genomes_project 6 85649997 85674404 + MGP_BALBcJ_P0078685 Efcc1 protein_coding protein_coding MGP_BALBcJ_T0078686.1 MGP_BALBcJ_G0030975.1 mouse_genomes_project 6 85650021 85677105 + MGP_BALBcJ_P0078686 Efcc1 protein_coding protein_coding MGP_BALBcJ_T0078687.1 MGP_BALBcJ_G0030975.1 mouse_genomes_project 6 85651941 85671018 + Efcc1 protein_coding processed_transcript MGP_BALBcJ_T0078688.1 MGP_BALBcJ_G0030975.1 mouse_genomes_project 6 85672474 85673715 + Efcc1 protein_coding retained_intron MGP_BALBcJ_T0005048.1 MGP_BALBcJ_G0004309.1 mouse_genomes_project 6 117469003 117476105 + Gm44317 antisense antisense MGP_BALBcJ_T0080779.1 MGP_BALBcJ_G0031424.1 mouse_genomes_project 6 137466713 137468170 - MGP_BALBcJ_P0080779 Igbp1b protein_coding protein_coding MGP_BALBcJ_T0099988.1 MGP_BALBcJ_G0038024.1 mouse_genomes_project 6 15476600 15476707 + Gm23648 snRNA snRNA MGP_BALBcJ_T0002159.1 MGP_BALBcJ_G0002071.1 mouse_genomes_project 6 135758194 135759002 + TEC TEC MGP_BALBcJ_T0000285.1 MGP_BALBcJ_G0000226.1 mouse_genomes_project 6 65926966 65927761 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0080542.1 MGP_BALBcJ_G0031360.1 mouse_genomes_project 6 130802214 130805389 - MGP_BALBcJ_P0080542 protein_coding protein_coding MGP_BALBcJ_T0004905.1 MGP_BALBcJ_G0004214.1 mouse_genomes_project 6 31026054 31048361 + Gm13856 antisense antisense MGP_BALBcJ_T0015288.1 MGP_BALBcJ_G0013385.1 mouse_genomes_project 6 38467706 38468082 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080036.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122805775 122818235 - MGP_BALBcJ_P0080036 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080037.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122805775 122829614 - MGP_BALBcJ_P0080037 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080038.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122805775 122829525 - MGP_BALBcJ_P0080038 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080039.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122805788 122806911 - MGP_BALBcJ_P0080039 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080040.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122806176 122829484 - MGP_BALBcJ_P0080040 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080041.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122810086 122812542 - MGP_BALBcJ_P0080041 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080042.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122810134 122812492 - MGP_BALBcJ_P0080042 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080043.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122812827 122813789 - Ptpn6 protein_coding retained_intron MGP_BALBcJ_T0080044.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122813981 122817852 - Ptpn6 protein_coding processed_transcript MGP_BALBcJ_T0080045.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122817442 122818163 - MGP_BALBcJ_P0080045 Ptpn6 protein_coding protein_coding MGP_BALBcJ_T0080046.1 MGP_BALBcJ_G0031240.1 mouse_genomes_project 6 122817735 122818191 - Ptpn6 protein_coding retained_intron MGP_BALBcJ_T0001914.1 MGP_BALBcJ_G0001827.1 mouse_genomes_project 6 3588267 3589621 - TEC TEC MGP_BALBcJ_T0015493.1 MGP_BALBcJ_G0013590.1 mouse_genomes_project 6 101226338 101226491 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008603.1 MGP_BALBcJ_G0006952.1 mouse_genomes_project 6 66982546 66982784 - Rprl1 lincRNA lincRNA MGP_BALBcJ_T0015355.1 MGP_BALBcJ_G0013452.1 mouse_genomes_project 6 61286399 61286615 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080481.1 MGP_BALBcJ_G0031332.1 mouse_genomes_project 6 127833527 127849396 - MGP_BALBcJ_P0080481 Klrk1 protein_coding protein_coding MGP_BALBcJ_T0080482.1 MGP_BALBcJ_G0031332.1 mouse_genomes_project 6 127835981 127848302 - MGP_BALBcJ_P0080482 Klrk1 protein_coding protein_coding MGP_BALBcJ_T0080483.1 MGP_BALBcJ_G0031332.1 mouse_genomes_project 6 127836027 127849373 - MGP_BALBcJ_P0080483 Klrk1 protein_coding protein_coding MGP_BALBcJ_T0080484.1 MGP_BALBcJ_G0031332.1 mouse_genomes_project 6 127840419 127848111 - Klrk1 protein_coding retained_intron MGP_BALBcJ_T0080485.1 MGP_BALBcJ_G0031332.1 mouse_genomes_project 6 127840494 127848214 - Klrk1 protein_coding retained_intron MGP_BALBcJ_T0080486.1 MGP_BALBcJ_G0031332.1 mouse_genomes_project 6 127846131 127849392 - Klrk1 protein_coding retained_intron MGP_BALBcJ_T0080401.1 MGP_BALBcJ_G0031308.1 mouse_genomes_project 6 126735497 126759146 - MGP_BALBcJ_P0080401 Klrb1a protein_coding protein_coding MGP_BALBcJ_T0080402.1 MGP_BALBcJ_G0031308.1 mouse_genomes_project 6 126735619 126759084 - MGP_BALBcJ_P0080402 Klrb1a protein_coding protein_coding MGP_BALBcJ_T0080403.1 MGP_BALBcJ_G0031308.1 mouse_genomes_project 6 126735984 126756919 - MGP_BALBcJ_P0080403 Klrb1a protein_coding protein_coding MGP_BALBcJ_T0080404.1 MGP_BALBcJ_G0031308.1 mouse_genomes_project 6 126735984 126759125 - MGP_BALBcJ_P0080404 Klrb1a protein_coding protein_coding MGP_BALBcJ_T0077474.1 MGP_BALBcJ_G0030699.1 mouse_genomes_project 6 46120784 46125646 + MGP_BALBcJ_P0077474 Svs1 protein_coding protein_coding MGP_BALBcJ_T0076640.1 MGP_BALBcJ_G0030504.1 mouse_genomes_project 6 26173034 26176878 - MGP_BALBcJ_P0076640 Opn1sw protein_coding protein_coding MGP_BALBcJ_T0076641.1 MGP_BALBcJ_G0030504.1 mouse_genomes_project 6 26173747 26176796 - MGP_BALBcJ_P0076641 Opn1sw protein_coding protein_coding MGP_BALBcJ_T0076642.1 MGP_BALBcJ_G0030504.1 mouse_genomes_project 6 26175295 26176778 - Opn1sw protein_coding processed_transcript MGP_BALBcJ_T0076643.1 MGP_BALBcJ_G0030504.1 mouse_genomes_project 6 26175737 26185315 - MGP_BALBcJ_P0076643 Opn1sw protein_coding protein_coding MGP_BALBcJ_T0008525.1 MGP_BALBcJ_G0006897.1 mouse_genomes_project 6 28411527 28554902 + Gm43154 lincRNA lincRNA MGP_BALBcJ_T0008526.1 MGP_BALBcJ_G0006897.1 mouse_genomes_project 6 28411605 28555165 + Gm43154 lincRNA lincRNA MGP_BALBcJ_T0008529.1 MGP_BALBcJ_G0006897.1 mouse_genomes_project 6 28476920 28555167 + Gm43154 lincRNA lincRNA MGP_BALBcJ_T0081023.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145339746 145355466 + MGP_BALBcJ_P0081023 Fgfr1op2 protein_coding protein_coding MGP_BALBcJ_T0081024.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145340415 145362971 + MGP_BALBcJ_P0081024 Fgfr1op2 protein_coding protein_coding MGP_BALBcJ_T0081025.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145340415 145362971 + MGP_BALBcJ_P0081025 Fgfr1op2 protein_coding protein_coding MGP_BALBcJ_T0081026.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145340477 145355466 + MGP_BALBcJ_P0081026 Fgfr1op2 protein_coding protein_coding MGP_BALBcJ_T0081027.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145340496 145352585 + Fgfr1op2 protein_coding processed_transcript MGP_BALBcJ_T0081028.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145340498 145349880 + Fgfr1op2 protein_coding retained_intron MGP_BALBcJ_T0081029.1 MGP_BALBcJ_G0031470.1 mouse_genomes_project 6 145350889 145360276 + Fgfr1op2 protein_coding processed_transcript MGP_BALBcJ_T0018242.1 MGP_BALBcJ_G0015575.1 mouse_genomes_project 6 60747955 60755964 - 9330118I20Rik processed_transcript lincRNA MGP_BALBcJ_T0018243.1 MGP_BALBcJ_G0015575.1 mouse_genomes_project 6 60753727 60758217 - 9330118I20Rik processed_transcript retained_intron MGP_BALBcJ_T0015537.1 MGP_BALBcJ_G0013634.1 mouse_genomes_project 6 115883055 115883841 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010776.1 MGP_BALBcJ_G0008901.1 mouse_genomes_project 6 103440791 103440869 + Gm25570 miRNA miRNA MGP_BALBcJ_T0080081.1 MGP_BALBcJ_G0031247.1 mouse_genomes_project 6 122896507 122900352 - MGP_BALBcJ_P0080081 Tpi1 protein_coding protein_coding MGP_BALBcJ_T0080082.1 MGP_BALBcJ_G0031247.1 mouse_genomes_project 6 122897180 122899081 - MGP_BALBcJ_P0080082 Tpi1 protein_coding protein_coding MGP_BALBcJ_T0080083.1 MGP_BALBcJ_G0031247.1 mouse_genomes_project 6 122897193 122897897 - Tpi1 protein_coding retained_intron MGP_BALBcJ_T0080084.1 MGP_BALBcJ_G0031247.1 mouse_genomes_project 6 122898459 122898851 - Tpi1 protein_coding retained_intron MGP_BALBcJ_T0002564.1 MGP_BALBcJ_G0002466.1 mouse_genomes_project 6 38516073 38516118 + Trbj1-7 TR_J_gene processed_transcript MGP_BALBcJ_T0002565.1 MGP_BALBcJ_G0002466.1 mouse_genomes_project 6 38516073 38516119 + MGP_BALBcJ_P0002565 Trbj1-7 TR_J_gene TR_J_gene MGP_BALBcJ_T0004921.1 MGP_BALBcJ_G0004228.1 mouse_genomes_project 6 39357640 39367527 + 2010310C07Rik antisense antisense MGP_BALBcJ_T0004922.1 MGP_BALBcJ_G0004228.1 mouse_genomes_project 6 39364927 39368187 + 2010310C07Rik antisense antisense MGP_BALBcJ_T0015420.1 MGP_BALBcJ_G0013517.1 mouse_genomes_project 6 72969467 72970449 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015395.1 MGP_BALBcJ_G0013492.1 mouse_genomes_project 6 65328481 65329560 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076265.1 MGP_BALBcJ_G0030428.1 mouse_genomes_project 6 4715070 4908769 - MGP_BALBcJ_P0076265 Col28a1 protein_coding protein_coding MGP_BALBcJ_T0076266.1 MGP_BALBcJ_G0030428.1 mouse_genomes_project 6 4738642 4740119 - Col28a1 protein_coding processed_transcript MGP_BALBcJ_T0076267.1 MGP_BALBcJ_G0030428.1 mouse_genomes_project 6 4790522 4795387 - Col28a1 protein_coding retained_intron MGP_BALBcJ_T0079158.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 103708670 103868936 + Cntn4 protein_coding processed_transcript MGP_BALBcJ_T0079159.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 103708755 104697673 + MGP_BALBcJ_P0079159 Cntn4 protein_coding protein_coding MGP_BALBcJ_T0079160.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 103708755 104721861 + MGP_BALBcJ_P0079160 Cntn4 protein_coding protein_coding MGP_BALBcJ_T0079161.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 103708785 104721866 + MGP_BALBcJ_P0079161 Cntn4 protein_coding protein_coding MGP_BALBcJ_T0079162.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 103950549 104697679 + MGP_BALBcJ_P0079162 Cntn4 protein_coding protein_coding MGP_BALBcJ_T0079163.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104145161 104640247 + MGP_BALBcJ_P0079163 Cntn4 protein_coding protein_coding MGP_BALBcJ_T0079164.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104145314 104549268 + Cntn4 protein_coding processed_transcript MGP_BALBcJ_T0079165.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104145402 104696896 + MGP_BALBcJ_P0079165 Cntn4 protein_coding protein_coding MGP_BALBcJ_T0079166.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104145451 104373100 + Cntn4 protein_coding processed_transcript MGP_BALBcJ_T0079167.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104537387 104720314 + Cntn4 protein_coding processed_transcript MGP_BALBcJ_T0079168.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104679745 104721748 + Cntn4 protein_coding processed_transcript MGP_BALBcJ_T0079169.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104703251 104704225 + Cntn4 protein_coding retained_intron MGP_BALBcJ_T0079170.1 MGP_BALBcJ_G0031073.1 mouse_genomes_project 6 104716774 104720458 + Cntn4 protein_coding processed_transcript MGP_BALBcJ_T0000021.1 MGP_BALBcJ_G0000015.1 mouse_genomes_project 6 68457107 68457639 + MGP_BALBcJ_P0000021 Igkc IG_C_gene IG_C_gene MGP_BALBcJ_T0077851.1 MGP_BALBcJ_G0030803.1 mouse_genomes_project 6 58422698 58444816 + Mmrn1 protein_coding retained_intron MGP_BALBcJ_T0077852.1 MGP_BALBcJ_G0030803.1 mouse_genomes_project 6 58443173 58487179 + MGP_BALBcJ_P0077852 Mmrn1 protein_coding protein_coding MGP_BALBcJ_T0077853.1 MGP_BALBcJ_G0030803.1 mouse_genomes_project 6 58443175 58487179 + MGP_BALBcJ_P0077853 Mmrn1 protein_coding protein_coding MGP_BALBcJ_T0002011.1 MGP_BALBcJ_G0001924.1 mouse_genomes_project 6 70505275 70508062 - TEC TEC MGP_BALBcJ_T0080633.1 MGP_BALBcJ_G0031396.1 mouse_genomes_project 6 133761207 133773659 - MGP_BALBcJ_P0080633 Gprc5d protein_coding protein_coding MGP_BALBcJ_T0080634.1 MGP_BALBcJ_G0031396.1 mouse_genomes_project 6 133761207 133773622 - MGP_BALBcJ_P0080634 Gprc5d protein_coding protein_coding MGP_BALBcJ_T0079492.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113521661 113538137 - Raf1 protein_coding retained_intron MGP_BALBcJ_T0079493.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113522163 113580843 - MGP_BALBcJ_P0079493 Raf1 protein_coding protein_coding MGP_BALBcJ_T0079494.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113522163 113581514 - MGP_BALBcJ_P0079494 Raf1 protein_coding protein_coding MGP_BALBcJ_T0079495.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113522191 113525420 - MGP_BALBcJ_P0079495 Raf1 protein_coding protein_coding MGP_BALBcJ_T0079496.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113522835 113523913 - Raf1 protein_coding retained_intron MGP_BALBcJ_T0079497.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113523188 113527168 - MGP_BALBcJ_P0079497 Raf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079498.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113523859 113534242 - Raf1 protein_coding retained_intron MGP_BALBcJ_T0079499.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113525410 113530653 - Raf1 protein_coding retained_intron MGP_BALBcJ_T0079500.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113525420 113530691 - Raf1 protein_coding retained_intron MGP_BALBcJ_T0079501.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113527146 113536511 - MGP_BALBcJ_P0079501 Raf1 protein_coding protein_coding MGP_BALBcJ_T0079502.1 MGP_BALBcJ_G0031132.1 mouse_genomes_project 6 113533713 113581514 - Raf1 protein_coding retained_intron MGP_BALBcJ_T0079601.1 MGP_BALBcJ_G0031152.1 mouse_genomes_project 6 114490483 114491577 - MGP_BALBcJ_P0079601 Olfr215 protein_coding protein_coding MGP_BALBcJ_T0077915.1 MGP_BALBcJ_G0030816.1 mouse_genomes_project 6 64067229 64068375 - MGP_BALBcJ_P0077915 Vmn1r33 protein_coding protein_coding MGP_BALBcJ_T0077055.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35806906 35884849 + MGP_BALBcJ_P0077055 Tbxas1 protein_coding protein_coding MGP_BALBcJ_T0077056.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35850330 36018262 + MGP_BALBcJ_P0077056 Tbxas1 protein_coding protein_coding MGP_BALBcJ_T0077057.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35850355 35961795 + Tbxas1 protein_coding retained_intron MGP_BALBcJ_T0077058.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35850374 36018262 + Tbxas1 protein_coding retained_intron MGP_BALBcJ_T0077059.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35872947 35933790 + MGP_BALBcJ_P0077059 Tbxas1 protein_coding protein_coding MGP_BALBcJ_T0077060.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35904037 35916014 + Tbxas1 protein_coding processed_transcript MGP_BALBcJ_T0077061.1 MGP_BALBcJ_G0030575.1 mouse_genomes_project 6 35915797 36006885 + Tbxas1 protein_coding retained_intron MGP_BALBcJ_T0000144.1 MGP_BALBcJ_G0000110.1 mouse_genomes_project 6 65843760 65844539 + MGP_BALBcJ_P0000144 Igkv1-110 IG_V_gene IG_V_gene MGP_BALBcJ_T0080491.1 MGP_BALBcJ_G0031335.1 mouse_genomes_project 6 127877871 127890188 - MGP_BALBcJ_P0080491 Klrc1 protein_coding protein_coding MGP_BALBcJ_T0080492.1 MGP_BALBcJ_G0031335.1 mouse_genomes_project 6 127886039 127890143 - MGP_BALBcJ_P0080492 Klrc1 protein_coding protein_coding MGP_BALBcJ_T0080493.1 MGP_BALBcJ_G0031335.1 mouse_genomes_project 6 127886040 127890188 - MGP_BALBcJ_P0080493 Klrc1 protein_coding protein_coding MGP_BALBcJ_T0080494.1 MGP_BALBcJ_G0031335.1 mouse_genomes_project 6 127886064 127890125 - MGP_BALBcJ_P0080494 Klrc1 protein_coding protein_coding MGP_BALBcJ_T0008681.1 MGP_BALBcJ_G0007013.1 mouse_genomes_project 6 110715376 110723553 + Gm26799 lincRNA lincRNA MGP_BALBcJ_T0077508.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250050 47339436 + MGP_BALBcJ_P0077508 Mpp6 protein_coding protein_coding MGP_BALBcJ_T0077509.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250058 47339425 + MGP_BALBcJ_P0077509 Mpp6 protein_coding protein_coding MGP_BALBcJ_T0077510.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250087 47339777 + MGP_BALBcJ_P0077510 Mpp6 protein_coding protein_coding MGP_BALBcJ_T0077511.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250089 47253620 + Mpp6 protein_coding retained_intron MGP_BALBcJ_T0077512.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250192 47339262 + MGP_BALBcJ_P0077512 Mpp6 protein_coding protein_coding MGP_BALBcJ_T0077513.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250216 47304530 + MGP_BALBcJ_P0077513 Mpp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077514.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47250669 47321615 + MGP_BALBcJ_P0077514 Mpp6 protein_coding protein_coding MGP_BALBcJ_T0077515.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47321301 47337551 + Mpp6 protein_coding processed_transcript MGP_BALBcJ_T0077518.1 MGP_BALBcJ_G0030708.1 mouse_genomes_project 6 47335407 47339165 + Mpp6 protein_coding retained_intron MGP_BALBcJ_T0002554.1 MGP_BALBcJ_G0002457.1 mouse_genomes_project 6 38507012 38507061 + MGP_BALBcJ_P0002554 Trbj2-4 TR_J_gene TR_J_gene MGP_BALBcJ_T0000200.1 MGP_BALBcJ_G0000150.1 mouse_genomes_project 6 68435390 68435987 + MGP_BALBcJ_P0000200 Igkv3-1 IG_V_gene IG_V_gene MGP_BALBcJ_T0015225.1 MGP_BALBcJ_G0013322.1 mouse_genomes_project 6 8820106 8820404 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078088.1 MGP_BALBcJ_G0030855.1 mouse_genomes_project 6 70119968 70123300 - MGP_BALBcJ_P0078088 Vamp5 protein_coding protein_coding MGP_BALBcJ_T0078089.1 MGP_BALBcJ_G0030855.1 mouse_genomes_project 6 70120202 70131539 - MGP_BALBcJ_P0078089 Vamp5 protein_coding protein_coding MGP_BALBcJ_T0078090.1 MGP_BALBcJ_G0030855.1 mouse_genomes_project 6 70120208 70131585 - MGP_BALBcJ_P0078090 Vamp5 protein_coding protein_coding MGP_BALBcJ_T0015542.1 MGP_BALBcJ_G0013639.1 mouse_genomes_project 6 118822270 118822588 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080941.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143784855 143840108 - MGP_BALBcJ_P0080941 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080942.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143790259 143868915 - MGP_BALBcJ_P0080942 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080943.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143795768 143868915 - MGP_BALBcJ_P0080943 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080944.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143796048 143826339 - Bcat1 protein_coding processed_transcript MGP_BALBcJ_T0080945.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143799837 143839906 - MGP_BALBcJ_P0080945 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080946.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143807783 143823172 - MGP_BALBcJ_P0080946 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080947.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143811421 143839151 - MGP_BALBcJ_P0080947 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080948.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143823118 143832161 - Bcat1 protein_coding processed_transcript MGP_BALBcJ_T0080949.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143823137 143838959 - MGP_BALBcJ_P0080949 Bcat1 protein_coding protein_coding MGP_BALBcJ_T0080950.1 MGP_BALBcJ_G0031457.1 mouse_genomes_project 6 143823201 143832273 - Bcat1 protein_coding processed_transcript MGP_BALBcJ_T0011614.1 MGP_BALBcJ_G0009739.1 mouse_genomes_project 6 27554840 27555070 + Gm27522 misc_RNA misc_RNA MGP_BALBcJ_T0002162.1 MGP_BALBcJ_G0002074.1 mouse_genomes_project 6 137410155 137410645 + TEC TEC MGP_BALBcJ_T0000165.1 MGP_BALBcJ_G0000125.1 mouse_genomes_project 6 66490664 66491431 - MGP_BALBcJ_P0000165 Igkv1-88 IG_V_gene IG_V_gene MGP_BALBcJ_T0008509.1 MGP_BALBcJ_G0006887.1 mouse_genomes_project 6 27278042 27281525 + 1700012C14Rik lincRNA lincRNA MGP_BALBcJ_T0008510.1 MGP_BALBcJ_G0006887.1 mouse_genomes_project 6 27278899 27281577 + 1700012C14Rik lincRNA lincRNA MGP_BALBcJ_T0002058.1 MGP_BALBcJ_G0001971.1 mouse_genomes_project 6 85749886 85752479 - TEC TEC MGP_BALBcJ_T0102625.1 MGP_BALBcJ_G0040441.1 mouse_genomes_project 6 55839682 55839977 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0076166.1 MGP_BALBcJ_G0030407.1 mouse_genomes_project 6 714908 719454 + MGP_BALBcJ_P0076166 Gng11 protein_coding protein_coding MGP_BALBcJ_T0010775.1 MGP_BALBcJ_G0008900.1 mouse_genomes_project 6 100845073 100845175 + Mir6373 miRNA miRNA MGP_BALBcJ_T0078997.1 MGP_BALBcJ_G0031038.1 mouse_genomes_project 6 90271914 90274501 - MGP_BALBcJ_P0078997 Trh protein_coding protein_coding MGP_BALBcJ_T0078137.1 MGP_BALBcJ_G0030863.1 mouse_genomes_project 6 70363563 70372885 - MGP_BALBcJ_P0078137 Tgoln1 protein_coding protein_coding MGP_BALBcJ_T0076580.1 MGP_BALBcJ_G0030493.1 mouse_genomes_project 6 25228536 25236102 - MGP_BALBcJ_P0076580 Pax4 protein_coding protein_coding MGP_BALBcJ_T0076581.1 MGP_BALBcJ_G0030493.1 mouse_genomes_project 6 25228536 25236204 - MGP_BALBcJ_P0076581 Pax4 protein_coding protein_coding MGP_BALBcJ_T0076582.1 MGP_BALBcJ_G0030493.1 mouse_genomes_project 6 25228541 25236102 - MGP_BALBcJ_P0076582 Pax4 protein_coding protein_coding MGP_BALBcJ_T0076583.1 MGP_BALBcJ_G0030493.1 mouse_genomes_project 6 25228577 25234031 - MGP_BALBcJ_P0076583 Pax4 protein_coding protein_coding MGP_BALBcJ_T0076584.1 MGP_BALBcJ_G0030493.1 mouse_genomes_project 6 25230738 25233226 - Pax4 protein_coding retained_intron MGP_BALBcJ_T0076585.1 MGP_BALBcJ_G0030493.1 mouse_genomes_project 6 25231625 25234031 - Pax4 protein_coding retained_intron MGP_BALBcJ_T0079229.1 MGP_BALBcJ_G0031088.1 mouse_genomes_project 6 110491618 110508656 - MGP_BALBcJ_P0079229 Oxtr protein_coding protein_coding MGP_BALBcJ_T0079230.1 MGP_BALBcJ_G0031088.1 mouse_genomes_project 6 110491622 110507107 - MGP_BALBcJ_P0079230 Oxtr protein_coding protein_coding MGP_BALBcJ_T0079081.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 95856214 96063918 + MGP_BALBcJ_P0079081 Mitf protein_coding protein_coding MGP_BALBcJ_T0079082.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 95856220 95987323 + Mitf protein_coding retained_intron MGP_BALBcJ_T0079083.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 95856220 96066674 + MGP_BALBcJ_P0079083 Mitf protein_coding protein_coding MGP_BALBcJ_T0079084.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 95974757 96064032 + MGP_BALBcJ_P0079084 Mitf protein_coding protein_coding MGP_BALBcJ_T0079085.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 95986061 96064032 + MGP_BALBcJ_P0079085 Mitf protein_coding protein_coding MGP_BALBcJ_T0079086.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 96036669 96064032 + MGP_BALBcJ_P0079086 Mitf protein_coding protein_coding MGP_BALBcJ_T0079087.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 96036696 96063822 + MGP_BALBcJ_P0079087 Mitf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079088.1 MGP_BALBcJ_G0031058.1 mouse_genomes_project 6 96036798 96063500 + MGP_BALBcJ_P0079088 Mitf protein_coding protein_coding MGP_BALBcJ_T0000193.1 MGP_BALBcJ_G0000145.1 mouse_genomes_project 6 67945643 68111408 - MGP_BALBcJ_P0000193 Igkv8-24 IG_V_gene IG_V_gene MGP_BALBcJ_T0008519.1 MGP_BALBcJ_G0006893.1 mouse_genomes_project 6 28161261 28176882 + Gm14532 lincRNA lincRNA MGP_BALBcJ_T0008608.1 MGP_BALBcJ_G0006957.1 mouse_genomes_project 6 69096467 69116686 + Gm44174 lincRNA lincRNA MGP_BALBcJ_T0078478.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83292604 83307738 + MGP_BALBcJ_P0078478 Smyd5 protein_coding protein_coding MGP_BALBcJ_T0078479.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83292617 83301575 + Smyd5 protein_coding retained_intron MGP_BALBcJ_T0078480.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83292688 83293434 + Smyd5 protein_coding retained_intron MGP_BALBcJ_T0078481.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83300376 83303188 + Smyd5 protein_coding retained_intron MGP_BALBcJ_T0078482.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83302862 83306746 + Smyd5 protein_coding retained_intron MGP_BALBcJ_T0078483.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83302957 83306263 + Smyd5 protein_coding processed_transcript MGP_BALBcJ_T0078484.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83302972 83306500 + Smyd5 protein_coding retained_intron MGP_BALBcJ_T0078485.1 MGP_BALBcJ_G0030932.1 mouse_genomes_project 6 83303805 83306735 + Smyd5 protein_coding processed_transcript MGP_BALBcJ_T0000160.1 MGP_BALBcJ_G0000121.1 mouse_genomes_project 6 66387775 66388331 - MGP_BALBcJ_P0000160 Igkv4-92 IG_V_gene IG_V_gene MGP_BALBcJ_T0002032.1 MGP_BALBcJ_G0001945.1 mouse_genomes_project 6 78631560 78634225 + TEC TEC MGP_BALBcJ_T0077768.1 MGP_BALBcJ_G0030767.1 mouse_genomes_project 6 54258985 54260049 + MGP_BALBcJ_P0077768 Vmn1r6 protein_coding protein_coding MGP_BALBcJ_T0000196.1 MGP_BALBcJ_G0000147.1 mouse_genomes_project 6 68311898 68312487 + MGP_BALBcJ_P0000196 Igkv3-9 IG_V_gene IG_V_gene MGP_BALBcJ_T0015612.1 MGP_BALBcJ_G0013709.1 mouse_genomes_project 6 130742371 130742606 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079149.1 MGP_BALBcJ_G0031071.1 mouse_genomes_project 6 101572108 101802224 + MGP_BALBcJ_P0079149 Chl1 protein_coding protein_coding MGP_BALBcJ_T0079150.1 MGP_BALBcJ_G0031071.1 mouse_genomes_project 6 101572484 101699297 + Chl1 protein_coding retained_intron MGP_BALBcJ_T0079151.1 MGP_BALBcJ_G0031071.1 mouse_genomes_project 6 101572590 101784072 + MGP_BALBcJ_P0079151 Chl1 protein_coding protein_coding MGP_BALBcJ_T0079152.1 MGP_BALBcJ_G0031071.1 mouse_genomes_project 6 101572696 101780317 + MGP_BALBcJ_P0079152 Chl1 protein_coding protein_coding MGP_BALBcJ_T0079153.1 MGP_BALBcJ_G0031071.1 mouse_genomes_project 6 101572852 101722595 + MGP_BALBcJ_P0079153 Chl1 protein_coding protein_coding MGP_BALBcJ_T0079154.1 MGP_BALBcJ_G0031071.1 mouse_genomes_project 6 101755103 101780674 + MGP_BALBcJ_P0079154 Chl1 protein_coding protein_coding MGP_BALBcJ_T0008564.1 MGP_BALBcJ_G0006923.1 mouse_genomes_project 6 45923825 45924372 - Gm44019 lincRNA lincRNA MGP_BALBcJ_T0011611.1 MGP_BALBcJ_G0009736.1 mouse_genomes_project 6 15783355 15783670 + Gm22718 misc_RNA misc_RNA MGP_BALBcJ_T0018267.1 MGP_BALBcJ_G0015584.1 mouse_genomes_project 6 118979742 118985227 + Gm4651 processed_transcript antisense MGP_BALBcJ_T0018268.1 MGP_BALBcJ_G0015584.1 mouse_genomes_project 6 118979874 118981366 + Gm4651 processed_transcript retained_intron MGP_BALBcJ_T0078251.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80857824 80861112 + MGP_BALBcJ_P0078251 Aup1 protein_coding protein_coding MGP_BALBcJ_T0078252.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80857949 80860990 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078253.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858017 80859689 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078254.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858032 80859659 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078255.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858034 80858473 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078256.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858034 80860982 + MGP_BALBcJ_P0078256 Aup1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078257.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858039 80859738 + MGP_BALBcJ_P0078257 Aup1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078258.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858041 80858819 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078259.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858051 80860986 + MGP_BALBcJ_P0078259 Aup1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078260.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858058 80859592 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078261.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80858694 80859421 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078262.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80859017 80859617 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078263.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80859713 80860948 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078264.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80859815 80860141 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078265.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80860151 80860697 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078266.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80860156 80860986 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0078267.1 MGP_BALBcJ_G0030891.1 mouse_genomes_project 6 80860524 80860980 + Aup1 protein_coding retained_intron MGP_BALBcJ_T0015539.1 MGP_BALBcJ_G0013636.1 mouse_genomes_project 6 117793141 117794025 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002553.1 MGP_BALBcJ_G0002456.1 mouse_genomes_project 6 38506873 38506922 + MGP_BALBcJ_P0002553 Trbj2-3 TR_J_gene TR_J_gene MGP_BALBcJ_T0015638.1 MGP_BALBcJ_G0013735.1 mouse_genomes_project 6 139215219 139215704 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004895.1 MGP_BALBcJ_G0004205.1 mouse_genomes_project 6 26119830 26120235 - Gm17172 antisense antisense MGP_BALBcJ_T0080697.1 MGP_BALBcJ_G0031411.1 mouse_genomes_project 6 135607225 135623039 - MGP_BALBcJ_P0080697 Art4 protein_coding protein_coding MGP_BALBcJ_T0078063.1 MGP_BALBcJ_G0030851.1 mouse_genomes_project 6 70069716 70095933 - MGP_BALBcJ_P0078063 Usp39 protein_coding protein_coding MGP_BALBcJ_T0078064.1 MGP_BALBcJ_G0030851.1 mouse_genomes_project 6 70072338 70084440 - Usp39 protein_coding retained_intron MGP_BALBcJ_T0078065.1 MGP_BALBcJ_G0030851.1 mouse_genomes_project 6 70087331 70093873 - MGP_BALBcJ_P0078065 Usp39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080051.1 MGP_BALBcJ_G0031242.1 mouse_genomes_project 6 122830088 122846918 - MGP_BALBcJ_P0080051 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080725.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136271590 136444754 - MGP_BALBcJ_P0080725 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080726.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136272013 136365913 - MGP_BALBcJ_P0080726 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080727.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136272522 136444754 - MGP_BALBcJ_P0080727 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080728.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136294080 136443752 - MGP_BALBcJ_P0080728 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080729.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136308781 136314148 - Eps8 protein_coding processed_transcript MGP_BALBcJ_T0080730.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136311512 136450332 - MGP_BALBcJ_P0080730 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080731.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136311536 136314091 - Eps8 protein_coding retained_intron MGP_BALBcJ_T0080732.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136317249 136383897 - MGP_BALBcJ_P0080732 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080733.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136321787 136444698 - Eps8 protein_coding processed_transcript MGP_BALBcJ_T0080734.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136329086 136332423 - Eps8 protein_coding retained_intron MGP_BALBcJ_T0080735.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136331971 136443752 - MGP_BALBcJ_P0080735 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080736.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136333670 136444711 - MGP_BALBcJ_P0080736 Eps8 protein_coding protein_coding MGP_BALBcJ_T0080737.1 MGP_BALBcJ_G0031418.1 mouse_genomes_project 6 136362036 136365655 - Eps8 protein_coding retained_intron MGP_BALBcJ_T0078615.1 MGP_BALBcJ_G0030960.1 mouse_genomes_project 6 84592872 84602245 - MGP_BALBcJ_P0078615 Snrnp27 protein_coding protein_coding MGP_BALBcJ_T0078616.1 MGP_BALBcJ_G0030960.1 mouse_genomes_project 6 84593126 84602214 - Snrnp27 protein_coding processed_transcript MGP_BALBcJ_T0078617.1 MGP_BALBcJ_G0030960.1 mouse_genomes_project 6 84593393 84602245 - MGP_BALBcJ_P0078617 Snrnp27 protein_coding protein_coding MGP_BALBcJ_T0078618.1 MGP_BALBcJ_G0030960.1 mouse_genomes_project 6 84600397 84602240 - Snrnp27 protein_coding processed_transcript MGP_BALBcJ_T0076877.1 MGP_BALBcJ_G0030541.1 mouse_genomes_project 6 31260786 31273645 + MGP_BALBcJ_P0076877 Akr1b10 protein_coding protein_coding MGP_BALBcJ_T0076878.1 MGP_BALBcJ_G0030541.1 mouse_genomes_project 6 31260817 31266289 + Akr1b10 protein_coding retained_intron MGP_BALBcJ_T0076879.1 MGP_BALBcJ_G0030541.1 mouse_genomes_project 6 31260849 31273443 + MGP_BALBcJ_P0076879 Akr1b10 protein_coding protein_coding MGP_BALBcJ_T0076880.1 MGP_BALBcJ_G0030541.1 mouse_genomes_project 6 31260849 31273642 + MGP_BALBcJ_P0076880 Akr1b10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076881.1 MGP_BALBcJ_G0030541.1 mouse_genomes_project 6 31266308 31267277 + Akr1b10 protein_coding retained_intron MGP_BALBcJ_T0076882.1 MGP_BALBcJ_G0030541.1 mouse_genomes_project 6 31268140 31269665 + Akr1b10 protein_coding retained_intron MGP_BALBcJ_T0079964.1 MGP_BALBcJ_G0031220.1 mouse_genomes_project 6 121215877 121252754 + MGP_BALBcJ_P0079964 Clec4b2 protein_coding protein_coding MGP_BALBcJ_T0008693.1 MGP_BALBcJ_G0007023.1 mouse_genomes_project 6 115529060 115577783 - lincRNA lincRNA MGP_BALBcJ_T0100016.1 MGP_BALBcJ_G0038052.1 mouse_genomes_project 6 93157728 93157835 - Gm26501 snRNA snRNA MGP_BALBcJ_T0010747.1 MGP_BALBcJ_G0008872.1 mouse_genomes_project 6 45154449 45154542 + Gm24563 miRNA miRNA MGP_BALBcJ_T0080525.1 MGP_BALBcJ_G0031351.1 mouse_genomes_project 6 129649125 129664302 - MGP_BALBcJ_P0080525 Styk1 protein_coding protein_coding MGP_BALBcJ_T0080526.1 MGP_BALBcJ_G0031351.1 mouse_genomes_project 6 129650113 129666841 - MGP_BALBcJ_P0080526 Styk1 protein_coding protein_coding MGP_BALBcJ_T0080527.1 MGP_BALBcJ_G0031351.1 mouse_genomes_project 6 129661651 129704154 - Styk1 protein_coding processed_transcript MGP_BALBcJ_T0080528.1 MGP_BALBcJ_G0031351.1 mouse_genomes_project 6 129689928 129704151 - Styk1 protein_coding processed_transcript MGP_BALBcJ_T0080529.1 MGP_BALBcJ_G0031351.1 mouse_genomes_project 6 129702527 129704154 - Styk1 protein_coding retained_intron MGP_BALBcJ_T0101943.1 MGP_BALBcJ_G0039807.1 mouse_genomes_project 6 119652378 119969220 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0001958.1 MGP_BALBcJ_G0001871.1 mouse_genomes_project 6 42242307 42244869 + TEC TEC MGP_BALBcJ_T0002149.1 MGP_BALBcJ_G0002061.1 mouse_genomes_project 6 127945692 127946077 - TEC TEC MGP_BALBcJ_T0080514.1 MGP_BALBcJ_G0031348.1 mouse_genomes_project 6 128646457 128670048 - MGP_BALBcJ_P0080514 Klra1 protein_coding protein_coding MGP_BALBcJ_T0080515.1 MGP_BALBcJ_G0031348.1 mouse_genomes_project 6 128646756 128658649 - Klra1 protein_coding retained_intron MGP_BALBcJ_T0080712.1 MGP_BALBcJ_G0031416.1 mouse_genomes_project 6 135843496 135962244 - MGP_BALBcJ_P0080712 Rerg protein_coding protein_coding MGP_BALBcJ_T0080713.1 MGP_BALBcJ_G0031416.1 mouse_genomes_project 6 135843502 135961470 - MGP_BALBcJ_P0080713 Rerg protein_coding protein_coding MGP_BALBcJ_T0080714.1 MGP_BALBcJ_G0031416.1 mouse_genomes_project 6 135844775 135961423 - MGP_BALBcJ_P0080714 Rerg protein_coding protein_coding MGP_BALBcJ_T0080715.1 MGP_BALBcJ_G0031416.1 mouse_genomes_project 6 135845065 135929454 - MGP_BALBcJ_P0080715 Rerg protein_coding protein_coding MGP_BALBcJ_T0080716.1 MGP_BALBcJ_G0031416.1 mouse_genomes_project 6 135909072 135961446 - MGP_BALBcJ_P0080716 Rerg protein_coding protein_coding MGP_BALBcJ_T0008559.1 MGP_BALBcJ_G0006918.1 mouse_genomes_project 6 45238094 45250782 - lincRNA lincRNA MGP_BALBcJ_T0076966.1 MGP_BALBcJ_G0030555.1 mouse_genomes_project 6 32367918 32399109 - MGP_BALBcJ_P0076966 Mtpn protein_coding protein_coding MGP_BALBcJ_T0076967.1 MGP_BALBcJ_G0030555.1 mouse_genomes_project 6 32381144 32399020 - MGP_BALBcJ_P0076967 Mtpn protein_coding protein_coding MGP_BALBcJ_T0078170.1 MGP_BALBcJ_G0030871.1 mouse_genomes_project 6 75053132 75069587 + MGP_BALBcJ_P0078170 Lrrtm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078171.1 MGP_BALBcJ_G0030871.1 mouse_genomes_project 6 75053140 75055961 + MGP_BALBcJ_P0078171 Lrrtm1 protein_coding protein_coding MGP_BALBcJ_T0078172.1 MGP_BALBcJ_G0030871.1 mouse_genomes_project 6 75053161 75055955 + MGP_BALBcJ_P0078172 Lrrtm1 protein_coding protein_coding MGP_BALBcJ_T0078173.1 MGP_BALBcJ_G0030871.1 mouse_genomes_project 6 75053365 75054556 + MGP_BALBcJ_P0078173 Lrrtm1 protein_coding protein_coding MGP_BALBcJ_T0077922.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351096 64476430 + MGP_BALBcJ_P0077922 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077923.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351122 64472469 + MGP_BALBcJ_P0077923 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077924.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351130 64472813 + MGP_BALBcJ_P0077924 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077925.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351133 64472829 + MGP_BALBcJ_P0077925 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077926.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351136 64472441 + MGP_BALBcJ_P0077926 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077927.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351139 64473626 + MGP_BALBcJ_P0077927 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077928.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351155 64472388 + MGP_BALBcJ_P0077928 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077929.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351248 64472686 + MGP_BALBcJ_P0077929 Gng12 protein_coding protein_coding MGP_BALBcJ_T0077930.1 MGP_BALBcJ_G0030823.1 mouse_genomes_project 6 64351590 64472107 + MGP_BALBcJ_P0077930 Gng12 protein_coding protein_coding MGP_BALBcJ_T0001926.1 MGP_BALBcJ_G0001839.1 mouse_genomes_project 6 18002806 18009707 + TEC TEC MGP_BALBcJ_T0101290.1 MGP_BALBcJ_G0039326.1 mouse_genomes_project 6 121827352 121827469 - Gm23079 snoRNA snoRNA MGP_BALBcJ_T0004911.1 MGP_BALBcJ_G0004219.1 mouse_genomes_project 6 35848448 35916813 - Gm42962 antisense antisense MGP_BALBcJ_T0015346.1 MGP_BALBcJ_G0013443.1 mouse_genomes_project 6 58375563 58376088 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079381.1 MGP_BALBcJ_G0031111.1 mouse_genomes_project 6 111620666 111624621 - MGP_BALBcJ_P0079381 Fancd2os protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079382.1 MGP_BALBcJ_G0031111.1 mouse_genomes_project 6 111620667 111624621 - MGP_BALBcJ_P0079382 Fancd2os protein_coding protein_coding MGP_BALBcJ_T0004881.1 MGP_BALBcJ_G0004197.1 mouse_genomes_project 6 5138313 5161672 - Gm16043 antisense antisense MGP_BALBcJ_T0076173.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1220931 1232523 + MGP_BALBcJ_P0076173 Col1a2 protein_coding protein_coding MGP_BALBcJ_T0076174.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1221589 1257859 + MGP_BALBcJ_P0076174 Col1a2 protein_coding protein_coding MGP_BALBcJ_T0076175.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1221798 1231119 + Col1a2 protein_coding retained_intron MGP_BALBcJ_T0076176.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1221798 1230623 + Col1a2 protein_coding retained_intron MGP_BALBcJ_T0076177.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1236936 1245763 + Col1a2 protein_coding retained_intron MGP_BALBcJ_T0076178.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1246467 1252200 + Col1a2 protein_coding retained_intron MGP_BALBcJ_T0076179.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1252095 1252938 + Col1a2 protein_coding retained_intron MGP_BALBcJ_T0076180.1 MGP_BALBcJ_G0030409.1 mouse_genomes_project 6 1253803 1254305 + Col1a2 protein_coding retained_intron MGP_BALBcJ_T0081157.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147916044 147947612 - MGP_BALBcJ_P0081157 Amn1 protein_coding protein_coding MGP_BALBcJ_T0081158.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147916164 147932272 - Amn1 protein_coding retained_intron MGP_BALBcJ_T0081159.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147916474 147947564 - Amn1 protein_coding processed_transcript MGP_BALBcJ_T0081160.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147916475 147947585 - MGP_BALBcJ_P0081160 Amn1 protein_coding protein_coding MGP_BALBcJ_T0081161.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147916480 147942394 - Amn1 protein_coding processed_transcript MGP_BALBcJ_T0081162.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147916496 147942391 - MGP_BALBcJ_P0081162 Amn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081163.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147925745 147947581 - Amn1 protein_coding processed_transcript MGP_BALBcJ_T0081164.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147928196 147947570 - Amn1 protein_coding retained_intron MGP_BALBcJ_T0081165.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147928362 147947595 - Amn1 protein_coding processed_transcript MGP_BALBcJ_T0081166.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147929774 147947587 - MGP_BALBcJ_P0081166 Amn1 protein_coding protein_coding MGP_BALBcJ_T0081167.1 MGP_BALBcJ_G0031493.1 mouse_genomes_project 6 147931762 147947602 - Amn1 protein_coding retained_intron MGP_BALBcJ_T0080635.1 MGP_BALBcJ_G0031397.1 mouse_genomes_project 6 133793569 133833362 - MGP_BALBcJ_P0080635 Hebp1 protein_coding protein_coding MGP_BALBcJ_T0080636.1 MGP_BALBcJ_G0031397.1 mouse_genomes_project 6 133817305 133833339 - Hebp1 protein_coding processed_transcript MGP_BALBcJ_T0080637.1 MGP_BALBcJ_G0031397.1 mouse_genomes_project 6 133819684 133862923 - Hebp1 protein_coding processed_transcript MGP_BALBcJ_T0080638.1 MGP_BALBcJ_G0031397.1 mouse_genomes_project 6 133830717 133833282 - Hebp1 protein_coding retained_intron MGP_BALBcJ_T0000154.1 MGP_BALBcJ_G0000117.1 mouse_genomes_project 6 66215105 66215585 - MGP_BALBcJ_P0000154 Igkv10-96 IG_V_gene IG_V_gene MGP_BALBcJ_T0002082.1 MGP_BALBcJ_G0001995.1 mouse_genomes_project 6 89962982 89964240 - TEC TEC MGP_BALBcJ_T0011646.1 MGP_BALBcJ_G0009771.1 mouse_genomes_project 6 110025241 110025555 + Gm25454 misc_RNA misc_RNA MGP_BALBcJ_T0100004.1 MGP_BALBcJ_G0038040.1 mouse_genomes_project 6 50644618 50644782 + Gm25818 snRNA snRNA MGP_BALBcJ_T0015230.1 MGP_BALBcJ_G0013327.1 mouse_genomes_project 6 10569712 10570006 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079911.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120527809 120537310 + MGP_BALBcJ_P0079911 Mfap5 protein_coding protein_coding MGP_BALBcJ_T0079912.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120535517 120551642 + MGP_BALBcJ_P0079912 Mfap5 protein_coding protein_coding MGP_BALBcJ_T0079913.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120535517 120551118 + MGP_BALBcJ_P0079913 Mfap5 protein_coding protein_coding MGP_BALBcJ_T0079914.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120535593 120550984 + MGP_BALBcJ_P0079914 Mfap5 protein_coding protein_coding MGP_BALBcJ_T0079915.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120535610 120550984 + MGP_BALBcJ_P0079915 Mfap5 protein_coding protein_coding MGP_BALBcJ_T0079916.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120535610 120550556 + MGP_BALBcJ_P0079916 Mfap5 protein_coding protein_coding MGP_BALBcJ_T0079917.1 MGP_BALBcJ_G0031205.1 mouse_genomes_project 6 120544725 120550987 + Mfap5 protein_coding retained_intron MGP_BALBcJ_T0076380.1 MGP_BALBcJ_G0030449.1 mouse_genomes_project 6 13800629 13840404 + MGP_BALBcJ_P0076380 Tes protein_coding protein_coding MGP_BALBcJ_T0076381.1 MGP_BALBcJ_G0030449.1 mouse_genomes_project 6 13800640 13804430 + Tes protein_coding retained_intron MGP_BALBcJ_T0076382.1 MGP_BALBcJ_G0030449.1 mouse_genomes_project 6 13800648 13831969 + MGP_BALBcJ_P0076382 Tes protein_coding protein_coding MGP_BALBcJ_T0076383.1 MGP_BALBcJ_G0030449.1 mouse_genomes_project 6 13800672 13823477 + Tes protein_coding processed_transcript MGP_BALBcJ_T0076384.1 MGP_BALBcJ_G0030449.1 mouse_genomes_project 6 13800704 13840409 + MGP_BALBcJ_P0076384 Tes protein_coding protein_coding MGP_BALBcJ_T0008770.1 MGP_BALBcJ_G0007081.1 mouse_genomes_project 6 147957873 147978934 - 1700003I16Rik lincRNA lincRNA MGP_BALBcJ_T0001951.1 MGP_BALBcJ_G0001864.1 mouse_genomes_project 6 37186491 37189318 + TEC TEC MGP_BALBcJ_T0015378.1 MGP_BALBcJ_G0013475.1 mouse_genomes_project 6 63980847 63982762 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002558.1 MGP_BALBcJ_G0002461.1 mouse_genomes_project 6 38514432 38514480 + MGP_BALBcJ_P0002558 Trbj1-2 TR_J_gene TR_J_gene MGP_BALBcJ_T0101752.1 MGP_BALBcJ_G0039712.1 mouse_genomes_project 6 126316344 126317509 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0002489.1 MGP_BALBcJ_G0002396.1 mouse_genomes_project 6 38513632 38513644 + MGP_BALBcJ_P0002489 Trbd1 TR_D_gene TR_D_gene MGP_BALBcJ_T0080793.1 MGP_BALBcJ_G0031427.1 mouse_genomes_project 6 138619356 138743955 + MGP_BALBcJ_P0080793 Pik3c2g protein_coding protein_coding MGP_BALBcJ_T0015502.1 MGP_BALBcJ_G0013599.1 mouse_genomes_project 6 105517981 105518630 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001955.1 MGP_BALBcJ_G0001868.1 mouse_genomes_project 6 42124233 42125462 + TEC TEC MGP_BALBcJ_T0079885.1 MGP_BALBcJ_G0031201.1 mouse_genomes_project 6 120284477 120296299 - MGP_BALBcJ_P0079885 Klrg1 protein_coding protein_coding MGP_BALBcJ_T0015417.1 MGP_BALBcJ_G0013514.1 mouse_genomes_project 6 71267122 71267541 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000278.1 MGP_BALBcJ_G0000219.1 mouse_genomes_project 6 65739811 65740278 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015640.1 MGP_BALBcJ_G0013737.1 mouse_genomes_project 6 139810415 139810532 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098385.1 MGP_BALBcJ_G0036439.1 mouse_genomes_project 6 68023424 68023654 + pseudogene pseudogene MGP_BALBcJ_T0015263.1 MGP_BALBcJ_G0013360.1 mouse_genomes_project 6 26777604 26778757 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077394.1 MGP_BALBcJ_G0030678.1 mouse_genomes_project 6 45689947 45692902 - Rarres2 protein_coding retained_intron MGP_BALBcJ_T0077395.1 MGP_BALBcJ_G0030678.1 mouse_genomes_project 6 45689947 45692944 - MGP_BALBcJ_P0077395 Rarres2 protein_coding protein_coding MGP_BALBcJ_T0077396.1 MGP_BALBcJ_G0030678.1 mouse_genomes_project 6 45689947 45693011 - MGP_BALBcJ_P0077396 Rarres2 protein_coding protein_coding MGP_BALBcJ_T0077397.1 MGP_BALBcJ_G0030678.1 mouse_genomes_project 6 45689947 45693043 - MGP_BALBcJ_P0077397 Rarres2 protein_coding protein_coding MGP_BALBcJ_T0077398.1 MGP_BALBcJ_G0030678.1 mouse_genomes_project 6 45689961 45693045 - MGP_BALBcJ_P0077398 Rarres2 protein_coding protein_coding MGP_BALBcJ_T0000162.1 MGP_BALBcJ_G0000123.1 mouse_genomes_project 6 66435825 66436355 - MGP_BALBcJ_P0000162 Igkv4-90 IG_V_gene IG_V_gene MGP_BALBcJ_T0100032.1 MGP_BALBcJ_G0038068.1 mouse_genomes_project 6 121243381 121243463 - Gm22946 snRNA snRNA MGP_BALBcJ_T0076918.1 MGP_BALBcJ_G0030546.1 mouse_genomes_project 6 31735237 31744175 + Tmem140 protein_coding processed_transcript MGP_BALBcJ_T0076919.1 MGP_BALBcJ_G0030546.1 mouse_genomes_project 6 31735237 31747534 + MGP_BALBcJ_P0076919 Tmem140 protein_coding protein_coding MGP_BALBcJ_T0076920.1 MGP_BALBcJ_G0030546.1 mouse_genomes_project 6 31735353 31745201 + MGP_BALBcJ_P0076920 Tmem140 protein_coding protein_coding MGP_BALBcJ_T0076921.1 MGP_BALBcJ_G0030546.1 mouse_genomes_project 6 31739171 31741413 + Tmem140 protein_coding processed_transcript MGP_BALBcJ_T0076922.1 MGP_BALBcJ_G0030546.1 mouse_genomes_project 6 31739203 31745326 + MGP_BALBcJ_P0076922 Tmem140 protein_coding protein_coding MGP_BALBcJ_T0076925.1 MGP_BALBcJ_G0030546.1 mouse_genomes_project 6 31745301 31746143 + Tmem140 protein_coding processed_transcript MGP_BALBcJ_T0079981.1 MGP_BALBcJ_G0031224.1 mouse_genomes_project 6 121356220 121383583 + MGP_BALBcJ_P0079981 Vmn2r19 protein_coding protein_coding MGP_BALBcJ_T0077564.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49046616 49203701 - MGP_BALBcJ_P0077564 Skap2 protein_coding protein_coding MGP_BALBcJ_T0077565.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49048298 49061057 - Skap2 protein_coding processed_transcript MGP_BALBcJ_T0077566.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49048360 49203667 - MGP_BALBcJ_P0077566 Skap2 protein_coding protein_coding MGP_BALBcJ_T0077567.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49049250 49099454 - MGP_BALBcJ_P0077567 Skap2 protein_coding protein_coding MGP_BALBcJ_T0077568.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49059490 49061798 - Skap2 protein_coding retained_intron MGP_BALBcJ_T0077569.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49063599 49124102 - Skap2 protein_coding processed_transcript MGP_BALBcJ_T0077570.1 MGP_BALBcJ_G0030718.1 mouse_genomes_project 6 49181703 49203684 - Skap2 protein_coding retained_intron MGP_BALBcJ_T0000290.1 MGP_BALBcJ_G0000231.1 mouse_genomes_project 6 66257577 66259325 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0002047.1 MGP_BALBcJ_G0001960.1 mouse_genomes_project 6 84783901 84785497 + TEC TEC MGP_BALBcJ_T0080490.1 MGP_BALBcJ_G0031334.1 mouse_genomes_project 6 127875282 127889031 - MGP_BALBcJ_P0080490 protein_coding protein_coding MGP_BALBcJ_T0080028.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122797401 122798936 + Phb2 protein_coding retained_intron MGP_BALBcJ_T0080029.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122797401 122798134 + Phb2 protein_coding retained_intron MGP_BALBcJ_T0080030.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122797401 122802017 + Phb2 protein_coding retained_intron MGP_BALBcJ_T0080031.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122797401 122802017 + MGP_BALBcJ_P0080031 Phb2 protein_coding protein_coding MGP_BALBcJ_T0080032.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122797831 122799866 + MGP_BALBcJ_P0080032 Phb2 protein_coding protein_coding MGP_BALBcJ_T0080033.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122798187 122801707 + MGP_BALBcJ_P0080033 Phb2 protein_coding protein_coding MGP_BALBcJ_T0080034.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122800414 122802017 + Phb2 protein_coding retained_intron MGP_BALBcJ_T0080035.1 MGP_BALBcJ_G0031239.1 mouse_genomes_project 6 122800429 122801606 + Phb2 protein_coding processed_transcript MGP_BALBcJ_T0079254.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111096570 111126509 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079255.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111096570 111172355 + MGP_BALBcJ_P0079255 Setd5 protein_coding protein_coding MGP_BALBcJ_T0079256.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111096766 111125267 + Setd5 protein_coding processed_transcript MGP_BALBcJ_T0079257.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111096807 111136565 + Setd5 protein_coding processed_transcript MGP_BALBcJ_T0079258.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111096844 111172344 + MGP_BALBcJ_P0079258 Setd5 protein_coding protein_coding MGP_BALBcJ_T0079259.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111123882 111157218 + Setd5 protein_coding processed_transcript MGP_BALBcJ_T0079260.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111123984 111172355 + MGP_BALBcJ_P0079260 Setd5 protein_coding protein_coding MGP_BALBcJ_T0079261.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111127132 111172354 + MGP_BALBcJ_P0079261 Setd5 protein_coding unknown_likely_coding MGP_BALBcJ_T0079262.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111127820 111136879 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079263.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111128812 111170755 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079264.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111129364 111132637 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079265.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111129364 111136534 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079266.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111144291 111149325 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079267.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111146691 111170776 + Setd5 protein_coding retained_intron MGP_BALBcJ_T0079268.1 MGP_BALBcJ_G0031092.1 mouse_genomes_project 6 111147623 111157454 + Setd5 protein_coding processed_transcript MGP_BALBcJ_T0015371.1 MGP_BALBcJ_G0013468.1 mouse_genomes_project 6 63352870 63353435 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005077.1 MGP_BALBcJ_G0004334.1 mouse_genomes_project 6 132811253 132814383 - Gm17088 antisense antisense MGP_BALBcJ_T0079008.1 MGP_BALBcJ_G0031042.1 mouse_genomes_project 6 90898408 90913499 + MGP_BALBcJ_P0079008 Gm15737 protein_coding protein_coding MGP_BALBcJ_T0015544.1 MGP_BALBcJ_G0013641.1 mouse_genomes_project 6 119038238 119039669 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080143.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123076025 123082443 + MGP_BALBcJ_P0080143 Pianp protein_coding protein_coding MGP_BALBcJ_T0080144.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123076208 123082443 + MGP_BALBcJ_P0080144 Pianp protein_coding protein_coding MGP_BALBcJ_T0080145.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123076421 123079078 + MGP_BALBcJ_P0080145 Pianp protein_coding protein_coding MGP_BALBcJ_T0080146.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123077783 123082443 + MGP_BALBcJ_P0080146 Pianp protein_coding protein_coding MGP_BALBcJ_T0080147.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123077956 123081490 + MGP_BALBcJ_P0080147 Pianp protein_coding protein_coding MGP_BALBcJ_T0080148.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123077985 123078792 + MGP_BALBcJ_P0080148 Pianp protein_coding protein_coding MGP_BALBcJ_T0080149.1 MGP_BALBcJ_G0031258.1 mouse_genomes_project 6 123079008 123080396 + MGP_BALBcJ_P0080149 Pianp protein_coding protein_coding MGP_BALBcJ_T0015328.1 MGP_BALBcJ_G0013425.1 mouse_genomes_project 6 49927885 49928186 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099058.1 MGP_BALBcJ_G0037095.1 mouse_genomes_project 6 89516093 89526064 + Gm45216 sense_overlapping sense_overlapping MGP_BALBcJ_T0101247.1 MGP_BALBcJ_G0039283.1 mouse_genomes_project 6 36372156 36372287 - Gm25402 snoRNA snoRNA MGP_BALBcJ_T0102662.1 MGP_BALBcJ_G0040477.1 mouse_genomes_project 6 131325792 131326694 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0078211.1 MGP_BALBcJ_G0030882.1 mouse_genomes_project 6 79840299 79902951 + MGP_BALBcJ_P0078211 Eva1a protein_coding protein_coding MGP_BALBcJ_T0078212.1 MGP_BALBcJ_G0030882.1 mouse_genomes_project 6 79844688 79904157 + MGP_BALBcJ_P0078212 Eva1a protein_coding protein_coding MGP_BALBcJ_T0078213.1 MGP_BALBcJ_G0030882.1 mouse_genomes_project 6 79844753 79850153 + Eva1a protein_coding processed_transcript MGP_BALBcJ_T0078214.1 MGP_BALBcJ_G0030882.1 mouse_genomes_project 6 79856365 79903216 + MGP_BALBcJ_P0078214 Eva1a protein_coding protein_coding MGP_BALBcJ_T0100011.1 MGP_BALBcJ_G0038047.1 mouse_genomes_project 6 74003901 74004062 - Gm22283 snRNA snRNA MGP_BALBcJ_T0010731.1 MGP_BALBcJ_G0008856.1 mouse_genomes_project 6 24716224 24716320 - Mir592 miRNA miRNA MGP_BALBcJ_T0080291.1 MGP_BALBcJ_G0031285.1 mouse_genomes_project 6 124963042 125005998 - MGP_BALBcJ_P0080291 Dyrk4 protein_coding protein_coding MGP_BALBcJ_T0080292.1 MGP_BALBcJ_G0031285.1 mouse_genomes_project 6 124963215 124972407 - MGP_BALBcJ_P0080292 Dyrk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080293.1 MGP_BALBcJ_G0031285.1 mouse_genomes_project 6 124963221 124990481 - Dyrk4 protein_coding processed_transcript MGP_BALBcJ_T0011621.1 MGP_BALBcJ_G0009746.1 mouse_genomes_project 6 49355897 49356111 + Gm27861 misc_RNA misc_RNA MGP_BALBcJ_T0079931.1 MGP_BALBcJ_G0031209.1 mouse_genomes_project 6 120657862 120662908 + MGP_BALBcJ_P0079931 Dppa3 protein_coding protein_coding MGP_BALBcJ_T0079932.1 MGP_BALBcJ_G0031209.1 mouse_genomes_project 6 120659065 120662908 + MGP_BALBcJ_P0079932 Dppa3 protein_coding protein_coding MGP_BALBcJ_T0015503.1 MGP_BALBcJ_G0013600.1 mouse_genomes_project 6 105898876 105899488 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079302.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111349012 111356146 + MGP_BALBcJ_P0079302 Ogg1 protein_coding protein_coding MGP_BALBcJ_T0079303.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111349025 111350781 + Ogg1 protein_coding retained_intron MGP_BALBcJ_T0079304.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111349039 111356142 + MGP_BALBcJ_P0079304 Ogg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079305.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111349048 111351288 + Ogg1 protein_coding processed_transcript MGP_BALBcJ_T0079306.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111349053 111355943 + MGP_BALBcJ_P0079306 Ogg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079307.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111349151 111350912 + Ogg1 protein_coding retained_intron MGP_BALBcJ_T0079308.1 MGP_BALBcJ_G0031097.1 mouse_genomes_project 6 111355275 111357026 + Ogg1 protein_coding retained_intron MGP_BALBcJ_T0079632.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115745783 115754684 + Zfp239 protein_coding processed_transcript MGP_BALBcJ_T0079633.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115746760 115754645 + Zfp239 protein_coding processed_transcript MGP_BALBcJ_T0079634.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115746760 115757197 + MGP_BALBcJ_P0079634 Zfp239 protein_coding protein_coding MGP_BALBcJ_T0079635.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115746760 115756671 + MGP_BALBcJ_P0079635 Zfp239 protein_coding protein_coding MGP_BALBcJ_T0079636.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115746767 115752809 + Zfp239 protein_coding retained_intron MGP_BALBcJ_T0079637.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115746767 115754640 + Zfp239 protein_coding processed_transcript MGP_BALBcJ_T0079638.1 MGP_BALBcJ_G0031159.1 mouse_genomes_project 6 115746767 115754373 + Zfp239 protein_coding processed_transcript MGP_BALBcJ_T0077597.1 MGP_BALBcJ_G0030730.1 mouse_genomes_project 6 49438577 49442274 - MGP_BALBcJ_P0077597 Hoxa11 protein_coding protein_coding MGP_BALBcJ_T0077598.1 MGP_BALBcJ_G0030730.1 mouse_genomes_project 6 49438581 49442259 - Hoxa11 protein_coding processed_transcript MGP_BALBcJ_T0015247.1 MGP_BALBcJ_G0013344.1 mouse_genomes_project 6 16531972 16532938 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077574.1 MGP_BALBcJ_G0030721.1 mouse_genomes_project 6 49358240 49409859 - MGP_BALBcJ_P0077574 Gm28308 protein_coding protein_coding MGP_BALBcJ_T0015463.1 MGP_BALBcJ_G0013560.1 mouse_genomes_project 6 90301881 90302037 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015559.1 MGP_BALBcJ_G0013656.1 mouse_genomes_project 6 121199411 121199505 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077011.1 MGP_BALBcJ_G0030567.1 mouse_genomes_project 6 35201137 35253852 - MGP_BALBcJ_P0077011 Zc3hav1 protein_coding protein_coding MGP_BALBcJ_T0077012.1 MGP_BALBcJ_G0030567.1 mouse_genomes_project 6 35207185 35253852 - MGP_BALBcJ_P0077012 Zc3hav1 protein_coding protein_coding MGP_BALBcJ_T0077013.1 MGP_BALBcJ_G0030567.1 mouse_genomes_project 6 35212266 35254182 - MGP_BALBcJ_P0077013 Zc3hav1 protein_coding protein_coding MGP_BALBcJ_T0077014.1 MGP_BALBcJ_G0030567.1 mouse_genomes_project 6 35212266 35254182 - MGP_BALBcJ_P0077014 Zc3hav1 protein_coding protein_coding MGP_BALBcJ_T0079974.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121328853 121336935 - MGP_BALBcJ_P0079974 Clec4e protein_coding protein_coding MGP_BALBcJ_T0079975.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121329013 121336934 - Clec4e protein_coding retained_intron MGP_BALBcJ_T0079976.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121329209 121336935 - Clec4e protein_coding retained_intron MGP_BALBcJ_T0079977.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121329732 121336935 - Clec4e protein_coding retained_intron MGP_BALBcJ_T0079978.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121330555 121336935 - MGP_BALBcJ_P0079978 Clec4e protein_coding protein_coding MGP_BALBcJ_T0079979.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121330758 121336931 - MGP_BALBcJ_P0079979 Clec4e protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079980.1 MGP_BALBcJ_G0031223.1 mouse_genomes_project 6 121334841 121336935 - Clec4e protein_coding processed_transcript MGP_BALBcJ_T0078600.1 MGP_BALBcJ_G0030955.1 mouse_genomes_project 6 84336958 84355611 + MGP_BALBcJ_P0078600 Gm44790 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002043.1 MGP_BALBcJ_G0001956.1 mouse_genomes_project 6 84411145 84414251 + TEC TEC MGP_BALBcJ_T0015551.1 MGP_BALBcJ_G0013648.1 mouse_genomes_project 6 120054550 120054682 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079021.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92559765 92665154 + MGP_BALBcJ_P0079021 Slc25a26 protein_coding protein_coding MGP_BALBcJ_T0079022.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92559767 92664537 + MGP_BALBcJ_P0079022 Slc25a26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079023.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92559803 92665154 + MGP_BALBcJ_P0079023 Slc25a26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079024.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92559983 92570274 + Slc25a26 protein_coding processed_transcript MGP_BALBcJ_T0079025.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92566977 92656601 + MGP_BALBcJ_P0079025 Slc25a26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079026.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92593660 92664345 + Slc25a26 protein_coding processed_transcript MGP_BALBcJ_T0079027.1 MGP_BALBcJ_G0031044.1 mouse_genomes_project 6 92639067 92664065 + Slc25a26 protein_coding processed_transcript MGP_BALBcJ_T0101734.1 MGP_BALBcJ_G0039704.1 mouse_genomes_project 6 8791759 8802069 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101735.1 MGP_BALBcJ_G0039704.1 mouse_genomes_project 6 8791951 8792511 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0015588.1 MGP_BALBcJ_G0013685.1 mouse_genomes_project 6 126816572 126816729 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002177.1 MGP_BALBcJ_G0002089.1 mouse_genomes_project 6 145527537 145528779 + TEC TEC MGP_BALBcJ_T0000197.1 MGP_BALBcJ_G0000148.1 mouse_genomes_project 6 68422837 68423458 + MGP_BALBcJ_P0000197 IG_V_gene IG_V_gene MGP_BALBcJ_T0004916.1 MGP_BALBcJ_G0004223.1 mouse_genomes_project 6 36537865 36546550 - Gm16272 antisense antisense MGP_BALBcJ_T0001944.1 MGP_BALBcJ_G0001857.1 mouse_genomes_project 6 30281624 30283236 + TEC TEC MGP_BALBcJ_T0102659.1 MGP_BALBcJ_G0040474.1 mouse_genomes_project 6 131226433 131227366 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0077248.1 MGP_BALBcJ_G0030637.1 mouse_genomes_project 6 39450929 39451802 - MGP_BALBcJ_P0077248 protein_coding protein_coding MGP_BALBcJ_T0077249.1 MGP_BALBcJ_G0030637.1 mouse_genomes_project 6 39451002 39456123 - MGP_BALBcJ_P0077249 protein_coding protein_coding MGP_BALBcJ_T0011652.1 MGP_BALBcJ_G0009777.1 mouse_genomes_project 6 140515571 140515882 - Gm23069 misc_RNA misc_RNA MGP_BALBcJ_T0101265.1 MGP_BALBcJ_G0039301.1 mouse_genomes_project 6 65830737 65830882 - Gm25436 snoRNA snoRNA MGP_BALBcJ_T0008657.1 MGP_BALBcJ_G0006994.1 mouse_genomes_project 6 89432119 89432888 + 1810044D09Rik lincRNA lincRNA MGP_BALBcJ_T0079904.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120466711 120486946 - MGP_BALBcJ_P0079904 Rimklb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079905.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120466713 120472146 - Rimklb protein_coding processed_transcript MGP_BALBcJ_T0079906.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120472514 120507940 - MGP_BALBcJ_P0079906 Rimklb protein_coding protein_coding MGP_BALBcJ_T0079907.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120473673 120486894 - MGP_BALBcJ_P0079907 Rimklb protein_coding protein_coding MGP_BALBcJ_T0079908.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120478304 120492916 - Rimklb protein_coding processed_transcript MGP_BALBcJ_T0079909.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120484524 120507874 - MGP_BALBcJ_P0079909 Rimklb protein_coding protein_coding MGP_BALBcJ_T0079910.1 MGP_BALBcJ_G0031204.1 mouse_genomes_project 6 120492899 120520156 - MGP_BALBcJ_P0079910 Rimklb protein_coding protein_coding MGP_BALBcJ_T0079507.1 MGP_BALBcJ_G0031134.1 mouse_genomes_project 6 113679147 113712786 + MGP_BALBcJ_P0079507 Cand2 protein_coding protein_coding MGP_BALBcJ_T0002022.1 MGP_BALBcJ_G0001935.1 mouse_genomes_project 6 75505345 75508140 - TEC TEC MGP_BALBcJ_T0079388.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111663188 111720623 + MGP_BALBcJ_P0079388 Irak2 protein_coding protein_coding MGP_BALBcJ_T0079389.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111663209 111719981 + MGP_BALBcJ_P0079389 Irak2 protein_coding protein_coding MGP_BALBcJ_T0079390.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111663222 111691888 + Irak2 protein_coding retained_intron MGP_BALBcJ_T0079391.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111663257 111698911 + MGP_BALBcJ_P0079391 Irak2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079392.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111694727 111698817 + Irak2 protein_coding processed_transcript MGP_BALBcJ_T0079393.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111695655 111719981 + Irak2 protein_coding retained_intron MGP_BALBcJ_T0079394.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111716921 111720096 + Irak2 protein_coding retained_intron MGP_BALBcJ_T0079395.1 MGP_BALBcJ_G0031114.1 mouse_genomes_project 6 111718935 111720190 + Irak2 protein_coding processed_transcript MGP_BALBcJ_T0077827.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56216011 56228044 + MGP_BALBcJ_P0077827 Herc3 protein_coding protein_coding MGP_BALBcJ_T0077828.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56216070 56241136 + MGP_BALBcJ_P0077828 Herc3 protein_coding protein_coding MGP_BALBcJ_T0077829.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56216221 56294800 + MGP_BALBcJ_P0077829 Herc3 protein_coding protein_coding MGP_BALBcJ_T0077830.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56218029 56311205 + MGP_BALBcJ_P0077830 Herc3 protein_coding protein_coding MGP_BALBcJ_T0077831.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56249687 56263973 + Herc3 protein_coding retained_intron MGP_BALBcJ_T0077832.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56258628 56264070 + Herc3 protein_coding processed_transcript MGP_BALBcJ_T0077833.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56264570 56265270 + Herc3 protein_coding processed_transcript MGP_BALBcJ_T0077834.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56280314 56293270 + MGP_BALBcJ_P0077834 Herc3 protein_coding protein_coding MGP_BALBcJ_T0077835.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56292466 56295228 + Herc3 protein_coding retained_intron MGP_BALBcJ_T0077838.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56298132 56307630 + Herc3 protein_coding processed_transcript MGP_BALBcJ_T0077839.1 MGP_BALBcJ_G0030797.1 mouse_genomes_project 6 56300581 56311207 + MGP_BALBcJ_P0077839 Herc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0078510.1 MGP_BALBcJ_G0030940.1 mouse_genomes_project 6 83665875 83678102 - MGP_BALBcJ_P0078510 protein_coding protein_coding MGP_BALBcJ_T0078512.1 MGP_BALBcJ_G0030940.1 mouse_genomes_project 6 83666335 83667717 - MGP_BALBcJ_P0078512 protein_coding protein_coding MGP_BALBcJ_T0015301.1 MGP_BALBcJ_G0013398.1 mouse_genomes_project 6 44891811 44892190 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079570.1 MGP_BALBcJ_G0031144.1 mouse_genomes_project 6 114172155 114237158 + MGP_BALBcJ_P0079570 Zfand4 protein_coding protein_coding MGP_BALBcJ_T0015283.1 MGP_BALBcJ_G0013380.1 mouse_genomes_project 6 37975437 37975625 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076222.1 MGP_BALBcJ_G0030416.1 mouse_genomes_project 6 1996485 2034685 - MGP_BALBcJ_P0076222 Pon2 protein_coding protein_coding MGP_BALBcJ_T0076223.1 MGP_BALBcJ_G0030416.1 mouse_genomes_project 6 2002491 2034560 - Pon2 protein_coding retained_intron MGP_BALBcJ_T0076224.1 MGP_BALBcJ_G0030416.1 mouse_genomes_project 6 2005471 2021384 - Pon2 protein_coding processed_transcript MGP_BALBcJ_T0076225.1 MGP_BALBcJ_G0030416.1 mouse_genomes_project 6 2009868 2012706 - Pon2 protein_coding retained_intron MGP_BALBcJ_T0008567.1 MGP_BALBcJ_G0006925.1 mouse_genomes_project 6 47194033 47247437 + Gm3455 lincRNA lincRNA MGP_BALBcJ_T0008652.1 MGP_BALBcJ_G0006990.1 mouse_genomes_project 6 88456670 88457891 + Gm44421 lincRNA lincRNA MGP_BALBcJ_T0077277.1 MGP_BALBcJ_G0030652.1 mouse_genomes_project 6 40168517 40180144 + MGP_BALBcJ_P0077277 Olfr441 protein_coding protein_coding MGP_BALBcJ_T0077278.1 MGP_BALBcJ_G0030652.1 mouse_genomes_project 6 40179211 40180144 + MGP_BALBcJ_P0077278 Olfr441 protein_coding protein_coding MGP_BALBcJ_T0080223.1 MGP_BALBcJ_G0031268.1 mouse_genomes_project 6 123275355 123277117 + Mrpl51 protein_coding processed_transcript MGP_BALBcJ_T0080224.1 MGP_BALBcJ_G0031268.1 mouse_genomes_project 6 123275719 123279841 + MGP_BALBcJ_P0080224 Mrpl51 protein_coding protein_coding MGP_BALBcJ_T0080225.1 MGP_BALBcJ_G0031268.1 mouse_genomes_project 6 123275771 123276433 + Mrpl51 protein_coding retained_intron MGP_BALBcJ_T0002026.1 MGP_BALBcJ_G0001939.1 mouse_genomes_project 6 78020972 78023231 + TEC TEC MGP_BALBcJ_T0010737.1 MGP_BALBcJ_G0008862.1 mouse_genomes_project 6 26981974 26982080 - Mir96 miRNA miRNA MGP_BALBcJ_T0008536.1 MGP_BALBcJ_G0006906.1 mouse_genomes_project 6 31403724 31411989 + Gm13860 lincRNA lincRNA MGP_BALBcJ_T0077675.1 MGP_BALBcJ_G0030744.1 mouse_genomes_project 6 51809666 51855519 + MGP_BALBcJ_P0077675 Plekha8 protein_coding protein_coding MGP_BALBcJ_T0077910.1 MGP_BALBcJ_G0030814.1 mouse_genomes_project 6 63989217 64002099 + MGP_BALBcJ_P0077910 Mad2l1 protein_coding protein_coding MGP_BALBcJ_T0077911.1 MGP_BALBcJ_G0030814.1 mouse_genomes_project 6 63989252 63995874 + Mad2l1 protein_coding retained_intron MGP_BALBcJ_T0077912.1 MGP_BALBcJ_G0030814.1 mouse_genomes_project 6 63989295 63995874 + MGP_BALBcJ_P0077912 Mad2l1 protein_coding protein_coding MGP_BALBcJ_T0077913.1 MGP_BALBcJ_G0030814.1 mouse_genomes_project 6 63989505 63989901 + Mad2l1 protein_coding processed_transcript MGP_BALBcJ_T0000269.1 MGP_BALBcJ_G0000210.1 mouse_genomes_project 6 39955635 39956093 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0078114.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70298576 70317465 + MGP_BALBcJ_P0078114 Capg protein_coding protein_coding MGP_BALBcJ_T0078115.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70298722 70317463 + MGP_BALBcJ_P0078115 Capg protein_coding protein_coding MGP_BALBcJ_T0078116.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70299978 70310704 + MGP_BALBcJ_P0078116 Capg protein_coding protein_coding MGP_BALBcJ_T0078117.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70302387 70312222 + MGP_BALBcJ_P0078117 Capg protein_coding protein_coding MGP_BALBcJ_T0078118.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70303722 70317465 + MGP_BALBcJ_P0078118 Capg protein_coding protein_coding MGP_BALBcJ_T0078119.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70303881 70312193 + Capg protein_coding retained_intron MGP_BALBcJ_T0078120.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70303900 70310318 + MGP_BALBcJ_P0078120 Capg protein_coding protein_coding MGP_BALBcJ_T0078121.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70303907 70310087 + Capg protein_coding retained_intron MGP_BALBcJ_T0078122.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70304101 70310276 + MGP_BALBcJ_P0078122 Capg protein_coding protein_coding MGP_BALBcJ_T0078123.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70307388 70312709 + MGP_BALBcJ_P0078123 Capg protein_coding protein_coding MGP_BALBcJ_T0078124.1 MGP_BALBcJ_G0030860.1 mouse_genomes_project 6 70310430 70312299 + Capg protein_coding retained_intron MGP_BALBcJ_T0015408.1 MGP_BALBcJ_G0013505.1 mouse_genomes_project 6 69092828 69093227 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079067.1 MGP_BALBcJ_G0031055.1 mouse_genomes_project 6 95254441 95280150 + MGP_BALBcJ_P0079067 Arl6ip5 protein_coding protein_coding MGP_BALBcJ_T0101248.1 MGP_BALBcJ_G0039284.1 mouse_genomes_project 6 39247403 39247481 + Gm25108 snoRNA snoRNA MGP_BALBcJ_T0002055.1 MGP_BALBcJ_G0001968.1 mouse_genomes_project 6 85452361 85454997 + TEC TEC MGP_BALBcJ_T0101260.1 MGP_BALBcJ_G0039296.1 mouse_genomes_project 6 57083172 57083301 - Gm22622 snoRNA snoRNA MGP_BALBcJ_T0080166.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123119228 123128253 + MGP_BALBcJ_P0080166 Ing4 protein_coding protein_coding MGP_BALBcJ_T0080167.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123119304 123125430 + Ing4 protein_coding retained_intron MGP_BALBcJ_T0080168.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123119304 123128515 + MGP_BALBcJ_P0080168 Ing4 protein_coding protein_coding MGP_BALBcJ_T0080169.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123119316 123126823 + Ing4 protein_coding retained_intron MGP_BALBcJ_T0080170.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123119329 123128059 + Ing4 protein_coding retained_intron MGP_BALBcJ_T0080171.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123119329 123128516 + MGP_BALBcJ_P0080171 Ing4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080172.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123123199 123127257 + Ing4 protein_coding retained_intron MGP_BALBcJ_T0080173.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123124766 123128516 + Ing4 protein_coding retained_intron MGP_BALBcJ_T0080174.1 MGP_BALBcJ_G0031260.1 mouse_genomes_project 6 123126890 123127869 + Ing4 protein_coding retained_intron MGP_BALBcJ_T0004943.1 MGP_BALBcJ_G0004242.1 mouse_genomes_project 6 51897964 51898952 - Gm28402 antisense antisense MGP_BALBcJ_T0015317.1 MGP_BALBcJ_G0013414.1 mouse_genomes_project 6 46694223 46694969 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005014.1 MGP_BALBcJ_G0004288.1 mouse_genomes_project 6 90970360 91312075 + antisense antisense MGP_BALBcJ_T0005015.1 MGP_BALBcJ_G0004288.1 mouse_genomes_project 6 90970400 91311985 + antisense antisense MGP_BALBcJ_T0005016.1 MGP_BALBcJ_G0004288.1 mouse_genomes_project 6 90970610 91144510 + antisense antisense MGP_BALBcJ_T0005017.1 MGP_BALBcJ_G0004288.1 mouse_genomes_project 6 90970614 91179078 + antisense antisense MGP_BALBcJ_T0005018.1 MGP_BALBcJ_G0004288.1 mouse_genomes_project 6 90970614 91312073 + antisense antisense MGP_BALBcJ_T0005019.1 MGP_BALBcJ_G0004288.1 mouse_genomes_project 6 90970614 91144793 + antisense antisense MGP_BALBcJ_T0101269.1 MGP_BALBcJ_G0039305.1 mouse_genomes_project 6 70896062 70896258 - Gm24533 snoRNA snoRNA MGP_BALBcJ_T0002087.1 MGP_BALBcJ_G0002000.1 mouse_genomes_project 6 91280819 91283300 + TEC TEC MGP_BALBcJ_T0076538.1 MGP_BALBcJ_G0030482.1 mouse_genomes_project 6 21493881 21513214 + MGP_BALBcJ_P0076538 Hyal4 protein_coding protein_coding MGP_BALBcJ_T0011632.1 MGP_BALBcJ_G0009757.1 mouse_genomes_project 6 49461264 49461625 + Gm27383 misc_RNA misc_RNA MGP_BALBcJ_T0080619.1 MGP_BALBcJ_G0031393.1 mouse_genomes_project 6 133631630 133636787 + MGP_BALBcJ_P0080619 Apold1 protein_coding protein_coding MGP_BALBcJ_T0080396.1 MGP_BALBcJ_G0031307.1 mouse_genomes_project 6 126660259 126667826 - BC048546 protein_coding retained_intron MGP_BALBcJ_T0080397.1 MGP_BALBcJ_G0031307.1 mouse_genomes_project 6 126660265 126707565 - MGP_BALBcJ_P0080397 BC048546 protein_coding protein_coding MGP_BALBcJ_T0080398.1 MGP_BALBcJ_G0031307.1 mouse_genomes_project 6 126672826 126677642 - BC048546 protein_coding retained_intron MGP_BALBcJ_T0080399.1 MGP_BALBcJ_G0031307.1 mouse_genomes_project 6 126683878 126685109 - BC048546 protein_coding retained_intron MGP_BALBcJ_T0080400.1 MGP_BALBcJ_G0031307.1 mouse_genomes_project 6 126700127 126702696 - BC048546 protein_coding retained_intron MGP_BALBcJ_T0015415.1 MGP_BALBcJ_G0013512.1 mouse_genomes_project 6 70743574 70744160 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015597.1 MGP_BALBcJ_G0013694.1 mouse_genomes_project 6 128684484 128684822 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000133.1 MGP_BALBcJ_G0000101.1 mouse_genomes_project 6 65454071 65454542 + MGP_BALBcJ_P0000133 Igkv14-126 IG_V_gene IG_V_gene MGP_BALBcJ_T0079649.1 MGP_BALBcJ_G0031162.1 mouse_genomes_project 6 115898658 115981181 + MGP_BALBcJ_P0079649 Rasgef1a protein_coding protein_coding MGP_BALBcJ_T0079650.1 MGP_BALBcJ_G0031162.1 mouse_genomes_project 6 115955774 115980135 + MGP_BALBcJ_P0079650 Rasgef1a protein_coding protein_coding MGP_BALBcJ_T0079651.1 MGP_BALBcJ_G0031162.1 mouse_genomes_project 6 115955774 115980206 + MGP_BALBcJ_P0079651 Rasgef1a protein_coding protein_coding MGP_BALBcJ_T0078189.1 MGP_BALBcJ_G0030877.1 mouse_genomes_project 6 76270912 76273215 - Reg3g protein_coding retained_intron MGP_BALBcJ_T0078190.1 MGP_BALBcJ_G0030877.1 mouse_genomes_project 6 76270912 76273516 - MGP_BALBcJ_P0078190 Reg3g protein_coding protein_coding MGP_BALBcJ_T0099985.1 MGP_BALBcJ_G0038021.1 mouse_genomes_project 6 3651827 3651989 - Gm22155 snRNA snRNA MGP_BALBcJ_T0000274.1 MGP_BALBcJ_G0000215.1 mouse_genomes_project 6 65619361 65619828 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0077784.1 MGP_BALBcJ_G0030781.1 mouse_genomes_project 6 54719762 54720817 + MGP_BALBcJ_P0077784 protein_coding protein_coding MGP_BALBcJ_T0080581.1 MGP_BALBcJ_G0031386.1 mouse_genomes_project 6 133092154 133216111 - MGP_BALBcJ_P0080581 Lrp6 protein_coding protein_coding MGP_BALBcJ_T0080582.1 MGP_BALBcJ_G0031386.1 mouse_genomes_project 6 133096156 133118419 - Lrp6 protein_coding retained_intron MGP_BALBcJ_T0080583.1 MGP_BALBcJ_G0031386.1 mouse_genomes_project 6 133107990 133112115 - Lrp6 protein_coding retained_intron MGP_BALBcJ_T0080584.1 MGP_BALBcJ_G0031386.1 mouse_genomes_project 6 133109706 133114881 - Lrp6 protein_coding retained_intron MGP_BALBcJ_T0080585.1 MGP_BALBcJ_G0031386.1 mouse_genomes_project 6 133158930 133216163 - MGP_BALBcJ_P0080585 Lrp6 protein_coding protein_coding MGP_BALBcJ_T0080586.1 MGP_BALBcJ_G0031386.1 mouse_genomes_project 6 133188974 133189921 - Lrp6 protein_coding retained_intron MGP_BALBcJ_T0081071.1 MGP_BALBcJ_G0031478.1 mouse_genomes_project 6 145797804 145799773 + MGP_BALBcJ_P0081071 Rep15 protein_coding protein_coding MGP_BALBcJ_T0080430.1 MGP_BALBcJ_G0031317.1 mouse_genomes_project 6 127243517 127255345 + MGP_BALBcJ_P0080430 Klrb1f protein_coding protein_coding MGP_BALBcJ_T0080431.1 MGP_BALBcJ_G0031317.1 mouse_genomes_project 6 127243517 127255345 + MGP_BALBcJ_P0080431 Klrb1f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080432.1 MGP_BALBcJ_G0031317.1 mouse_genomes_project 6 127243536 127254590 + MGP_BALBcJ_P0080432 Klrb1f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080433.1 MGP_BALBcJ_G0031317.1 mouse_genomes_project 6 127243541 127250293 + Klrb1f protein_coding retained_intron MGP_BALBcJ_T0080434.1 MGP_BALBcJ_G0031317.1 mouse_genomes_project 6 127243543 127251366 + MGP_BALBcJ_P0080434 Klrb1f protein_coding protein_coding MGP_BALBcJ_T0080435.1 MGP_BALBcJ_G0031317.1 mouse_genomes_project 6 127246948 127251372 + Klrb1f protein_coding processed_transcript MGP_BALBcJ_T0078609.1 MGP_BALBcJ_G0030957.1 mouse_genomes_project 6 84441014 84442842 - MGP_BALBcJ_P0078609 Pcbp1 protein_coding protein_coding MGP_BALBcJ_T0076575.1 MGP_BALBcJ_G0030491.1 mouse_genomes_project 6 25209280 25212323 + MGP_BALBcJ_P0076575 Arf5 protein_coding protein_coding MGP_BALBcJ_T0076576.1 MGP_BALBcJ_G0030491.1 mouse_genomes_project 6 25209310 25212067 + MGP_BALBcJ_P0076576 Arf5 protein_coding protein_coding MGP_BALBcJ_T0076577.1 MGP_BALBcJ_G0030491.1 mouse_genomes_project 6 25209429 25210348 + Arf5 protein_coding retained_intron MGP_BALBcJ_T0015262.1 MGP_BALBcJ_G0013359.1 mouse_genomes_project 6 26566975 26567340 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015617.1 MGP_BALBcJ_G0013714.1 mouse_genomes_project 6 131181622 131182048 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077524.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47431183 47524933 - MGP_BALBcJ_P0077524 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077525.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47433036 47438207 - Osbpl3 protein_coding retained_intron MGP_BALBcJ_T0077526.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47433540 47508858 - MGP_BALBcJ_P0077526 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077527.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47434651 47598874 - MGP_BALBcJ_P0077527 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077528.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47434657 47508961 - MGP_BALBcJ_P0077528 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077529.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47438066 47524933 - Osbpl3 protein_coding retained_intron MGP_BALBcJ_T0077530.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47465125 47490621 - MGP_BALBcJ_P0077530 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077531.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47486114 47598865 - MGP_BALBcJ_P0077531 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077532.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47491483 47539621 - MGP_BALBcJ_P0077532 Osbpl3 protein_coding protein_coding MGP_BALBcJ_T0077533.1 MGP_BALBcJ_G0030710.1 mouse_genomes_project 6 47553950 47598905 - Osbpl3 protein_coding processed_transcript MGP_BALBcJ_T0080796.1 MGP_BALBcJ_G0031428.1 mouse_genomes_project 6 138765243 138819214 - MGP_BALBcJ_P0080796 Plcz1 protein_coding protein_coding MGP_BALBcJ_T0080797.1 MGP_BALBcJ_G0031428.1 mouse_genomes_project 6 138765292 138819188 - MGP_BALBcJ_P0080797 Plcz1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080798.1 MGP_BALBcJ_G0031428.1 mouse_genomes_project 6 138765294 138819169 - MGP_BALBcJ_P0080798 Plcz1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080799.1 MGP_BALBcJ_G0031428.1 mouse_genomes_project 6 138798618 138819169 - MGP_BALBcJ_P0080799 Plcz1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000187.1 MGP_BALBcJ_G0000141.1 mouse_genomes_project 6 67831584 67832144 - MGP_BALBcJ_P0000187 Igkv8-30 IG_V_gene IG_V_gene MGP_BALBcJ_T0008562.1 MGP_BALBcJ_G0006921.1 mouse_genomes_project 6 45878924 45880165 - Gm44226 lincRNA lincRNA MGP_BALBcJ_T0079039.1 MGP_BALBcJ_G0031048.1 mouse_genomes_project 6 93538716 93776140 - MGP_BALBcJ_P0079039 Suclg2 protein_coding protein_coding MGP_BALBcJ_T0079040.1 MGP_BALBcJ_G0031048.1 mouse_genomes_project 6 93630118 93707720 - Suclg2 protein_coding processed_transcript MGP_BALBcJ_T0079041.1 MGP_BALBcJ_G0031048.1 mouse_genomes_project 6 93658310 93721160 - MGP_BALBcJ_P0079041 Suclg2 protein_coding protein_coding MGP_BALBcJ_T0079042.1 MGP_BALBcJ_G0031048.1 mouse_genomes_project 6 93718444 93776165 - Suclg2 protein_coding retained_intron MGP_BALBcJ_T0077198.1 MGP_BALBcJ_G0030622.1 mouse_genomes_project 6 38946308 38951259 + MGP_BALBcJ_P0077198 Sval3 protein_coding protein_coding MGP_BALBcJ_T0077809.1 MGP_BALBcJ_G0030791.1 mouse_genomes_project 6 55215162 55216159 - MGP_BALBcJ_P0077809 Vmn1r23 protein_coding protein_coding MGP_BALBcJ_T0102657.1 MGP_BALBcJ_G0040472.1 mouse_genomes_project 6 131103436 131103801 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002708.1 MGP_BALBcJ_G0002584.1 mouse_genomes_project 6 38046373 38046775 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0015632.1 MGP_BALBcJ_G0013729.1 mouse_genomes_project 6 137666550 137667150 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078672.1 MGP_BALBcJ_G0030971.1 mouse_genomes_project 6 85345336 85354572 + MGP_BALBcJ_P0078672 Bmp10 protein_coding protein_coding MGP_BALBcJ_T0008492.1 MGP_BALBcJ_G0006875.1 mouse_genomes_project 6 13271713 13301451 + Gm43998 lincRNA lincRNA MGP_BALBcJ_T0015400.1 MGP_BALBcJ_G0013497.1 mouse_genomes_project 6 65806327 65807530 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079231.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110639615 110715286 - MGP_BALBcJ_P0079231 Rad18 protein_coding protein_coding MGP_BALBcJ_T0079232.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110639710 110715204 - MGP_BALBcJ_P0079232 Rad18 protein_coding protein_coding MGP_BALBcJ_T0079233.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110639738 110715211 - MGP_BALBcJ_P0079233 Rad18 protein_coding protein_coding MGP_BALBcJ_T0079234.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110639740 110715270 - MGP_BALBcJ_P0079234 Rad18 protein_coding protein_coding MGP_BALBcJ_T0079235.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110640596 110694109 - MGP_BALBcJ_P0079235 Rad18 protein_coding protein_coding MGP_BALBcJ_T0079236.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110646164 110715248 - Rad18 protein_coding processed_transcript MGP_BALBcJ_T0079237.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110664229 110715233 - MGP_BALBcJ_P0079237 Rad18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079238.1 MGP_BALBcJ_G0031089.1 mouse_genomes_project 6 110677648 110715244 - Rad18 protein_coding retained_intron MGP_BALBcJ_T0076338.1 MGP_BALBcJ_G0030442.1 mouse_genomes_project 6 10280990 10335971 - MGP_BALBcJ_P0076338 Bmt2 protein_coding protein_coding MGP_BALBcJ_T0076339.1 MGP_BALBcJ_G0030442.1 mouse_genomes_project 6 10282104 10335943 - MGP_BALBcJ_P0076339 Bmt2 protein_coding protein_coding MGP_BALBcJ_T0080662.1 MGP_BALBcJ_G0031403.1 mouse_genomes_project 6 135024327 135025032 + MGP_BALBcJ_P0080662 protein_coding protein_coding MGP_BALBcJ_T0080539.1 MGP_BALBcJ_G0031357.1 mouse_genomes_project 6 130064728 130065637 - MGP_BALBcJ_P0080539 Tas2r104 protein_coding protein_coding MGP_BALBcJ_T0005034.1 MGP_BALBcJ_G0004298.1 mouse_genomes_project 6 111086530 111096397 - antisense antisense MGP_BALBcJ_T0005035.1 MGP_BALBcJ_G0004298.1 mouse_genomes_project 6 111086761 111096383 - antisense antisense MGP_BALBcJ_T0005036.1 MGP_BALBcJ_G0004298.1 mouse_genomes_project 6 111089500 111096416 - antisense antisense MGP_BALBcJ_T0005037.1 MGP_BALBcJ_G0004298.1 mouse_genomes_project 6 111089876 111096539 - antisense antisense MGP_BALBcJ_T0008639.1 MGP_BALBcJ_G0006982.1 mouse_genomes_project 6 85516198 85517639 + Gm44201 lincRNA lincRNA MGP_BALBcJ_T0002575.1 MGP_BALBcJ_G0002476.1 mouse_genomes_project 6 38507248 38507296 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0079038.1 MGP_BALBcJ_G0031047.1 mouse_genomes_project 6 93383294 93383393 + MGP_BALBcJ_P0079038 Gm10234 protein_coding protein_coding MGP_BALBcJ_T0076321.1 MGP_BALBcJ_G0030439.1 mouse_genomes_project 6 9745976 9751312 + MGP_BALBcJ_P0076321 Tmem106b protein_coding protein_coding MGP_BALBcJ_T0076322.1 MGP_BALBcJ_G0030439.1 mouse_genomes_project 6 9746033 9748171 + MGP_BALBcJ_P0076322 Tmem106b protein_coding protein_coding MGP_BALBcJ_T0076323.1 MGP_BALBcJ_G0030439.1 mouse_genomes_project 6 9746056 9766077 + MGP_BALBcJ_P0076323 Tmem106b protein_coding protein_coding MGP_BALBcJ_T0076324.1 MGP_BALBcJ_G0030439.1 mouse_genomes_project 6 9746068 9751603 + Tmem106b protein_coding retained_intron MGP_BALBcJ_T0076325.1 MGP_BALBcJ_G0030439.1 mouse_genomes_project 6 9746071 9752588 + Tmem106b protein_coding processed_transcript MGP_BALBcJ_T0076326.1 MGP_BALBcJ_G0030439.1 mouse_genomes_project 6 9746468 9757873 + MGP_BALBcJ_P0076326 Tmem106b protein_coding protein_coding MGP_BALBcJ_T0011605.1 MGP_BALBcJ_G0009730.1 mouse_genomes_project 6 14435115 14435299 + Gm27960 misc_RNA misc_RNA MGP_BALBcJ_T0015538.1 MGP_BALBcJ_G0013635.1 mouse_genomes_project 6 116504541 116506139 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015511.1 MGP_BALBcJ_G0013608.1 mouse_genomes_project 6 108387427 108388002 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080684.1 MGP_BALBcJ_G0031408.1 mouse_genomes_project 6 135538294 135540132 + MGP_BALBcJ_P0080684 H2afj protein_coding protein_coding MGP_BALBcJ_T0080685.1 MGP_BALBcJ_G0031408.1 mouse_genomes_project 6 135538383 135539846 + MGP_BALBcJ_P0080685 H2afj protein_coding protein_coding MGP_BALBcJ_T0015393.1 MGP_BALBcJ_G0013490.1 mouse_genomes_project 6 65269330 65270684 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102642.1 MGP_BALBcJ_G0040458.1 mouse_genomes_project 6 121496313 121497070 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008697.1 MGP_BALBcJ_G0007027.1 mouse_genomes_project 6 116187059 116195505 - Gm30498 lincRNA lincRNA MGP_BALBcJ_T0008520.1 MGP_BALBcJ_G0006894.1 mouse_genomes_project 6 28171397 28203481 - Mkln1os lincRNA lincRNA MGP_BALBcJ_T0008522.1 MGP_BALBcJ_G0006894.1 mouse_genomes_project 6 28187545 28203461 - Mkln1os lincRNA lincRNA MGP_BALBcJ_T0008523.1 MGP_BALBcJ_G0006894.1 mouse_genomes_project 6 28189192 28203467 - Mkln1os lincRNA lincRNA MGP_BALBcJ_T0015245.1 MGP_BALBcJ_G0013342.1 mouse_genomes_project 6 16520091 16521040 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077961.1 MGP_BALBcJ_G0030830.1 mouse_genomes_project 6 68578122 68642498 + MGP_BALBcJ_P0077961 Eif2ak3 protein_coding protein_coding MGP_BALBcJ_T0077962.1 MGP_BALBcJ_G0030830.1 mouse_genomes_project 6 68578160 68600109 + MGP_BALBcJ_P0077962 Eif2ak3 protein_coding protein_coding MGP_BALBcJ_T0077963.1 MGP_BALBcJ_G0030830.1 mouse_genomes_project 6 68578163 68579227 + Eif2ak3 protein_coding retained_intron MGP_BALBcJ_T0077964.1 MGP_BALBcJ_G0030830.1 mouse_genomes_project 6 68614775 68629365 + Eif2ak3 protein_coding retained_intron MGP_BALBcJ_T0077965.1 MGP_BALBcJ_G0030830.1 mouse_genomes_project 6 68632692 68636187 + Eif2ak3 protein_coding retained_intron MGP_BALBcJ_T0002037.1 MGP_BALBcJ_G0001950.1 mouse_genomes_project 6 81131829 81134617 - TEC TEC MGP_BALBcJ_T0008643.1 MGP_BALBcJ_G0006986.1 mouse_genomes_project 6 87076791 87084248 + Gm1965 lincRNA lincRNA MGP_BALBcJ_T0008644.1 MGP_BALBcJ_G0006986.1 mouse_genomes_project 6 87076802 87082825 + Gm1965 lincRNA lincRNA MGP_BALBcJ_T0008645.1 MGP_BALBcJ_G0006986.1 mouse_genomes_project 6 87076802 87084231 + Gm1965 lincRNA lincRNA MGP_BALBcJ_T0008646.1 MGP_BALBcJ_G0006986.1 mouse_genomes_project 6 87076802 87084266 + Gm1965 lincRNA lincRNA MGP_BALBcJ_T0079472.1 MGP_BALBcJ_G0031127.1 mouse_genomes_project 6 113141938 113152242 - MGP_BALBcJ_P0079472 Timp4 protein_coding protein_coding MGP_BALBcJ_T0079473.1 MGP_BALBcJ_G0031127.1 mouse_genomes_project 6 113146878 113151895 - MGP_BALBcJ_P0079473 Timp4 protein_coding protein_coding MGP_BALBcJ_T0008524.1 MGP_BALBcJ_G0006896.1 mouse_genomes_project 6 28380994 28382748 + Gm6117 lincRNA lincRNA MGP_BALBcJ_T0080369.1 MGP_BALBcJ_G0031301.1 mouse_genomes_project 6 126493952 126502794 + MGP_BALBcJ_P0080369 4933413G19Rik protein_coding protein_coding MGP_BALBcJ_T0080370.1 MGP_BALBcJ_G0031301.1 mouse_genomes_project 6 126493952 126503457 + MGP_BALBcJ_P0080370 4933413G19Rik protein_coding protein_coding MGP_BALBcJ_T0098999.1 MGP_BALBcJ_G0037042.1 mouse_genomes_project 6 111631484 111635537 + Gm44200 sense_intronic sense_intronic MGP_BALBcJ_T0008708.1 MGP_BALBcJ_G0007038.1 mouse_genomes_project 6 125373945 125386475 - Gm38404 lincRNA lincRNA MGP_BALBcJ_T0002007.1 MGP_BALBcJ_G0001920.1 mouse_genomes_project 6 70358135 70360634 - TEC TEC MGP_BALBcJ_T0078856.1 MGP_BALBcJ_G0031009.1 mouse_genomes_project 6 88046000 88046933 - MGP_BALBcJ_P0078856 Vmn1r49 protein_coding protein_coding MGP_BALBcJ_T0078857.1 MGP_BALBcJ_G0031009.1 mouse_genomes_project 6 88046000 88052389 - MGP_BALBcJ_P0078857 Vmn1r49 protein_coding protein_coding MGP_BALBcJ_T0002671.1 MGP_BALBcJ_G0002553.1 mouse_genomes_project 6 38251463 38252078 + MGP_BALBcJ_P0002671 Trbv30 TR_V_gene TR_V_gene MGP_BALBcJ_T0002672.1 MGP_BALBcJ_G0002553.1 mouse_genomes_project 6 38251463 38252078 + MGP_BALBcJ_P0002672 Trbv30 TR_V_gene TR_V_gene MGP_BALBcJ_T0008486.1 MGP_BALBcJ_G0006871.1 mouse_genomes_project 6 7686707 7694728 - AA545190 lincRNA lincRNA MGP_BALBcJ_T0008487.1 MGP_BALBcJ_G0006871.1 mouse_genomes_project 6 7687205 7689526 - AA545190 lincRNA lincRNA MGP_BALBcJ_T0005608.1 MGP_BALBcJ_G0004724.1 mouse_genomes_project 6 113580846 113582659 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005609.1 MGP_BALBcJ_G0004724.1 mouse_genomes_project 6 113580873 113582015 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0080516.1 MGP_BALBcJ_G0031349.1 mouse_genomes_project 6 129572902 129597065 - MGP_BALBcJ_P0080516 Klra2 protein_coding protein_coding MGP_BALBcJ_T0080517.1 MGP_BALBcJ_G0031349.1 mouse_genomes_project 6 129573675 129597065 - MGP_BALBcJ_P0080517 Klra2 protein_coding protein_coding MGP_BALBcJ_T0015521.1 MGP_BALBcJ_G0013618.1 mouse_genomes_project 6 112084277 112084353 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077954.1 MGP_BALBcJ_G0030826.1 mouse_genomes_project 6 64752503 64801318 - MGP_BALBcJ_P0077954 Il12rb2 protein_coding protein_coding MGP_BALBcJ_T0077955.1 MGP_BALBcJ_G0030826.1 mouse_genomes_project 6 64753173 64838638 - MGP_BALBcJ_P0077955 Il12rb2 protein_coding protein_coding MGP_BALBcJ_T0008543.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33077938 33258134 - lincRNA lincRNA MGP_BALBcJ_T0008544.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33080305 33141957 - lincRNA lincRNA MGP_BALBcJ_T0008545.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33135950 33258375 - lincRNA lincRNA MGP_BALBcJ_T0008546.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33205550 33258517 - lincRNA lincRNA MGP_BALBcJ_T0008547.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33257661 33258571 - lincRNA lincRNA MGP_BALBcJ_T0008548.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33257663 33260474 - lincRNA lincRNA MGP_BALBcJ_T0008549.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33257670 33259200 - lincRNA lincRNA MGP_BALBcJ_T0008550.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33257948 33259710 - lincRNA lincRNA MGP_BALBcJ_T0008551.1 MGP_BALBcJ_G0006911.1 mouse_genomes_project 6 33258022 33259341 - lincRNA lincRNA MGP_BALBcJ_T0015509.1 MGP_BALBcJ_G0013606.1 mouse_genomes_project 6 107545793 107546050 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002170.1 MGP_BALBcJ_G0002082.1 mouse_genomes_project 6 142782346 142784474 - TEC TEC MGP_BALBcJ_T0008593.1 MGP_BALBcJ_G0006944.1 mouse_genomes_project 6 53816610 53889675 - Gm8239 lincRNA lincRNA MGP_BALBcJ_T0008552.1 MGP_BALBcJ_G0006912.1 mouse_genomes_project 6 35467656 35470230 - Gm26699 lincRNA lincRNA MGP_BALBcJ_T0010742.1 MGP_BALBcJ_G0008867.1 mouse_genomes_project 6 32383758 32383854 - Gm23053 miRNA miRNA MGP_BALBcJ_T0102656.1 MGP_BALBcJ_G0040471.1 mouse_genomes_project 6 130802590 130805384 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008502.1 MGP_BALBcJ_G0006883.1 mouse_genomes_project 6 22693434 22744769 + Gm20756 lincRNA lincRNA MGP_BALBcJ_T0008503.1 MGP_BALBcJ_G0006883.1 mouse_genomes_project 6 22719858 22723533 + Gm20756 lincRNA lincRNA MGP_BALBcJ_T0015386.1 MGP_BALBcJ_G0013483.1 mouse_genomes_project 6 64846867 64847791 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015610.1 MGP_BALBcJ_G0013707.1 mouse_genomes_project 6 130433175 130433626 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078093.1 MGP_BALBcJ_G0030857.1 mouse_genomes_project 6 70164374 70180761 + MGP_BALBcJ_P0078093 Ggcx protein_coding protein_coding MGP_BALBcJ_T0078094.1 MGP_BALBcJ_G0030857.1 mouse_genomes_project 6 70164407 70180450 + MGP_BALBcJ_P0078094 Ggcx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078095.1 MGP_BALBcJ_G0030857.1 mouse_genomes_project 6 70167921 70180291 + MGP_BALBcJ_P0078095 Ggcx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078096.1 MGP_BALBcJ_G0030857.1 mouse_genomes_project 6 70167972 70174093 + MGP_BALBcJ_P0078096 Ggcx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078097.1 MGP_BALBcJ_G0030857.1 mouse_genomes_project 6 70176669 70179307 + MGP_BALBcJ_P0078097 Ggcx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076460.1 MGP_BALBcJ_G0030461.1 mouse_genomes_project 6 17958052 18489263 + MGP_BALBcJ_P0076460 Kcnd2 protein_coding protein_coding MGP_BALBcJ_T0077938.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64698421 64732471 + Serbp1 protein_coding processed_transcript MGP_BALBcJ_T0077939.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64727823 64759486 + MGP_BALBcJ_P0077939 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077940.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728182 64745479 + MGP_BALBcJ_P0077940 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077941.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728187 64730554 + Serbp1 protein_coding retained_intron MGP_BALBcJ_T0077942.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728204 64745239 + MGP_BALBcJ_P0077942 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077943.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728209 64745220 + MGP_BALBcJ_P0077943 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077944.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728210 64735209 + Serbp1 protein_coding retained_intron MGP_BALBcJ_T0077945.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728210 64745484 + MGP_BALBcJ_P0077945 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077946.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728210 64745220 + MGP_BALBcJ_P0077946 Serbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077947.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728215 64735804 + Serbp1 protein_coding retained_intron MGP_BALBcJ_T0077948.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728237 64738980 + MGP_BALBcJ_P0077948 Serbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077949.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728270 64745187 + MGP_BALBcJ_P0077949 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077950.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728278 64733439 + Serbp1 protein_coding retained_intron MGP_BALBcJ_T0077951.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728456 64734054 + MGP_BALBcJ_P0077951 Serbp1 protein_coding protein_coding MGP_BALBcJ_T0077952.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64728529 64742987 + MGP_BALBcJ_P0077952 Serbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077953.1 MGP_BALBcJ_G0030825.1 mouse_genomes_project 6 64733077 64743004 + Serbp1 protein_coding retained_intron MGP_BALBcJ_T0005030.1 MGP_BALBcJ_G0004296.1 mouse_genomes_project 6 106573234 106662578 - 0610040F04Rik antisense antisense MGP_BALBcJ_T0005031.1 MGP_BALBcJ_G0004296.1 mouse_genomes_project 6 106606580 106610240 - 0610040F04Rik antisense antisense MGP_BALBcJ_T0076216.1 MGP_BALBcJ_G0030415.1 mouse_genomes_project 6 1947018 1984813 - MGP_BALBcJ_P0076216 Pon3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076217.1 MGP_BALBcJ_G0030415.1 mouse_genomes_project 6 1947018 1984866 - MGP_BALBcJ_P0076217 Pon3 protein_coding protein_coding MGP_BALBcJ_T0076218.1 MGP_BALBcJ_G0030415.1 mouse_genomes_project 6 1956400 1984815 - MGP_BALBcJ_P0076218 Pon3 protein_coding protein_coding MGP_BALBcJ_T0076219.1 MGP_BALBcJ_G0030415.1 mouse_genomes_project 6 1963195 1984794 - Pon3 protein_coding retained_intron MGP_BALBcJ_T0076220.1 MGP_BALBcJ_G0030415.1 mouse_genomes_project 6 1963638 1983446 - Pon3 protein_coding retained_intron MGP_BALBcJ_T0076221.1 MGP_BALBcJ_G0030415.1 mouse_genomes_project 6 1983159 1984147 - Pon3 protein_coding processed_transcript MGP_BALBcJ_T0008726.1 MGP_BALBcJ_G0007051.1 mouse_genomes_project 6 133579045 133580171 - Gm44238 lincRNA lincRNA MGP_BALBcJ_T0015583.1 MGP_BALBcJ_G0013680.1 mouse_genomes_project 6 126650685 126651091 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077341.1 MGP_BALBcJ_G0030668.1 mouse_genomes_project 6 44978378 45010473 + MGP_BALBcJ_P0077341 Zfp282 protein_coding protein_coding MGP_BALBcJ_T0077342.1 MGP_BALBcJ_G0030668.1 mouse_genomes_project 6 44978830 44994101 + Zfp282 protein_coding retained_intron MGP_BALBcJ_T0015584.1 MGP_BALBcJ_G0013681.1 mouse_genomes_project 6 126651673 126652787 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002069.1 MGP_BALBcJ_G0001982.1 mouse_genomes_project 6 86853089 86856019 + TEC TEC MGP_BALBcJ_T0000292.1 MGP_BALBcJ_G0000233.1 mouse_genomes_project 6 66300097 66300822 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015345.1 MGP_BALBcJ_G0013442.1 mouse_genomes_project 6 57939291 57939473 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099002.1 MGP_BALBcJ_G0037045.1 mouse_genomes_project 6 126467744 126469115 - Gm44190 sense_intronic sense_intronic MGP_BALBcJ_T0002119.1 MGP_BALBcJ_G0002032.1 mouse_genomes_project 6 111744151 111744846 + TEC TEC MGP_BALBcJ_T0002112.1 MGP_BALBcJ_G0002025.1 mouse_genomes_project 6 110107780 110108336 - TEC TEC MGP_BALBcJ_T0008688.1 MGP_BALBcJ_G0007020.1 mouse_genomes_project 6 115389325 115394148 + Gm43983 lincRNA lincRNA MGP_BALBcJ_T0008647.1 MGP_BALBcJ_G0006987.1 mouse_genomes_project 6 87226291 87227616 - Gm44204 lincRNA lincRNA MGP_BALBcJ_T0000316.1 MGP_BALBcJ_G0000257.1 mouse_genomes_project 6 68220799 68221358 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015296.1 MGP_BALBcJ_G0013393.1 mouse_genomes_project 6 41865567 41866464 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004909.1 MGP_BALBcJ_G0004217.1 mouse_genomes_project 6 31600016 31608177 - Gm14547 antisense antisense MGP_BALBcJ_T0010741.1 MGP_BALBcJ_G0008866.1 mouse_genomes_project 6 27865109 27865180 - Mir29b-1 miRNA miRNA MGP_BALBcJ_T0015578.1 MGP_BALBcJ_G0013675.1 mouse_genomes_project 6 125490030 125492057 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015518.1 MGP_BALBcJ_G0013615.1 mouse_genomes_project 6 111374553 111377009 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080828.1 MGP_BALBcJ_G0031433.1 mouse_genomes_project 6 140050969 140312826 + MGP_BALBcJ_P0080828 Pde3a protein_coding protein_coding MGP_BALBcJ_T0080829.1 MGP_BALBcJ_G0031433.1 mouse_genomes_project 6 140051666 140272961 + Pde3a protein_coding retained_intron MGP_BALBcJ_T0077847.1 MGP_BALBcJ_G0030802.1 mouse_genomes_project 6 58228883 58324629 - MGP_BALBcJ_P0077847 Snca protein_coding protein_coding MGP_BALBcJ_T0077848.1 MGP_BALBcJ_G0030802.1 mouse_genomes_project 6 58228887 58323778 - MGP_BALBcJ_P0077848 Snca protein_coding protein_coding MGP_BALBcJ_T0077849.1 MGP_BALBcJ_G0030802.1 mouse_genomes_project 6 58303251 58322330 - Snca protein_coding processed_transcript MGP_BALBcJ_T0077850.1 MGP_BALBcJ_G0030802.1 mouse_genomes_project 6 58309264 58323646 - Snca protein_coding retained_intron MGP_BALBcJ_T0076405.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14375530 14395773 + Capza2 protein_coding processed_transcript MGP_BALBcJ_T0076406.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14376279 14406349 + MGP_BALBcJ_P0076406 Capza2 protein_coding protein_coding MGP_BALBcJ_T0076407.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14376331 14398932 + Capza2 protein_coding retained_intron MGP_BALBcJ_T0076408.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14376338 14395723 + Capza2 protein_coding processed_transcript MGP_BALBcJ_T0076409.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14376406 14404967 + MGP_BALBcJ_P0076409 Capza2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076410.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14376409 14400133 + MGP_BALBcJ_P0076410 Capza2 protein_coding protein_coding MGP_BALBcJ_T0076411.1 MGP_BALBcJ_G0030453.1 mouse_genomes_project 6 14399928 14405063 + Capza2 protein_coding retained_intron MGP_BALBcJ_T0002006.1 MGP_BALBcJ_G0001919.1 mouse_genomes_project 6 70189684 70191244 + TEC TEC MGP_BALBcJ_T0078671.1 MGP_BALBcJ_G0030970.1 mouse_genomes_project 6 85305859 85311531 - MGP_BALBcJ_P0078671 Gkn3 protein_coding protein_coding MGP_BALBcJ_T0080620.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660481 133673022 + MGP_BALBcJ_P0080620 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0080621.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660491 133668156 + MGP_BALBcJ_P0080621 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0080622.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660493 133668120 + MGP_BALBcJ_P0080622 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0080623.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660495 133665746 + Ddx47 protein_coding retained_intron MGP_BALBcJ_T0080624.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660501 133673018 + Ddx47 protein_coding retained_intron MGP_BALBcJ_T0080625.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660502 133667235 + MGP_BALBcJ_P0080625 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0080626.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660504 133664743 + Ddx47 protein_coding retained_intron MGP_BALBcJ_T0080627.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660513 133670685 + MGP_BALBcJ_P0080627 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0080628.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133660522 133670708 + MGP_BALBcJ_P0080628 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0080629.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133664467 133668185 + Ddx47 protein_coding processed_transcript MGP_BALBcJ_T0080630.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133664938 133667653 + Ddx47 protein_coding retained_intron MGP_BALBcJ_T0080631.1 MGP_BALBcJ_G0031394.1 mouse_genomes_project 6 133668118 133673018 + MGP_BALBcJ_P0080631 Ddx47 protein_coding protein_coding MGP_BALBcJ_T0076623.1 MGP_BALBcJ_G0030501.1 mouse_genomes_project 6 26073415 26082248 + MGP_BALBcJ_P0076623 Fam71f2 protein_coding protein_coding MGP_BALBcJ_T0076624.1 MGP_BALBcJ_G0030501.1 mouse_genomes_project 6 26074963 26084997 + MGP_BALBcJ_P0076624 Fam71f2 protein_coding protein_coding MGP_BALBcJ_T0076625.1 MGP_BALBcJ_G0030501.1 mouse_genomes_project 6 26074965 26084992 + MGP_BALBcJ_P0076625 Fam71f2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080471.1 MGP_BALBcJ_G0031329.1 mouse_genomes_project 6 127751845 127761026 + MGP_BALBcJ_P0080471 Gabarapl1 protein_coding protein_coding MGP_BALBcJ_T0076720.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860760 26965829 + MGP_BALBcJ_P0076720 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076721.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860763 26910113 + MGP_BALBcJ_P0076721 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076722.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860774 26965552 + MGP_BALBcJ_P0076722 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076723.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860801 26910446 + Nrf1 protein_coding retained_intron MGP_BALBcJ_T0076724.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860803 26957428 + MGP_BALBcJ_P0076724 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076725.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860814 26906890 + MGP_BALBcJ_P0076725 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076726.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860817 26964885 + MGP_BALBcJ_P0076726 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076727.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860839 26964880 + MGP_BALBcJ_P0076727 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076728.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860844 26957765 + MGP_BALBcJ_P0076728 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076729.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860844 26942610 + MGP_BALBcJ_P0076729 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076730.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26860923 26901726 + MGP_BALBcJ_P0076730 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076731.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26888626 26941945 + MGP_BALBcJ_P0076731 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076732.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26901576 26957423 + MGP_BALBcJ_P0076732 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076733.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26901582 26941589 + MGP_BALBcJ_P0076733 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076734.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26901582 26957423 + MGP_BALBcJ_P0076734 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076735.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26901582 26941589 + MGP_BALBcJ_P0076735 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076736.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26901582 26964036 + MGP_BALBcJ_P0076736 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0076737.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26901621 26902686 + Nrf1 protein_coding retained_intron MGP_BALBcJ_T0076738.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26909320 26928098 + Nrf1 protein_coding processed_transcript MGP_BALBcJ_T0076739.1 MGP_BALBcJ_G0030516.1 mouse_genomes_project 6 26928086 26953472 + MGP_BALBcJ_P0076739 Nrf1 protein_coding protein_coding MGP_BALBcJ_T0015582.1 MGP_BALBcJ_G0013679.1 mouse_genomes_project 6 126563967 126565282 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008768.1 MGP_BALBcJ_G0007079.1 mouse_genomes_project 6 147672543 147677861 - Gm43913 lincRNA lincRNA MGP_BALBcJ_T0015232.1 MGP_BALBcJ_G0013329.1 mouse_genomes_project 6 10747631 10747936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008594.1 MGP_BALBcJ_G0006945.1 mouse_genomes_project 6 57446102 57573666 + lincRNA lincRNA MGP_BALBcJ_T0008595.1 MGP_BALBcJ_G0006945.1 mouse_genomes_project 6 57504053 57507954 + lincRNA lincRNA MGP_BALBcJ_T0002015.1 MGP_BALBcJ_G0001928.1 mouse_genomes_project 6 75136845 75137702 - TEC TEC MGP_BALBcJ_T0077973.1 MGP_BALBcJ_G0030834.1 mouse_genomes_project 6 68943420 68948621 + MGP_BALBcJ_P0077973 Fabp1 protein_coding protein_coding MGP_BALBcJ_T0080511.1 MGP_BALBcJ_G0031346.1 mouse_genomes_project 6 128604225 128618432 - MGP_BALBcJ_P0080511 protein_coding protein_coding MGP_BALBcJ_T0080512.1 MGP_BALBcJ_G0031346.1 mouse_genomes_project 6 128604329 128618360 - MGP_BALBcJ_P0080512 protein_coding protein_coding MGP_BALBcJ_T0080555.1 MGP_BALBcJ_G0031372.1 mouse_genomes_project 6 131209255 131210220 - MGP_BALBcJ_P0080555 Tas2r129 protein_coding protein_coding MGP_BALBcJ_T0015260.1 MGP_BALBcJ_G0013357.1 mouse_genomes_project 6 23606317 23607059 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015298.1 MGP_BALBcJ_G0013395.1 mouse_genomes_project 6 43698091 43699082 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015485.1 MGP_BALBcJ_G0013582.1 mouse_genomes_project 6 98711656 98712078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015353.1 MGP_BALBcJ_G0013450.1 mouse_genomes_project 6 60333779 60334305 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002031.1 MGP_BALBcJ_G0001944.1 mouse_genomes_project 6 78320447 78323162 + TEC TEC MGP_BALBcJ_T0079640.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115819163 115823321 - MGP_BALBcJ_P0079640 Fxyd4 protein_coding protein_coding MGP_BALBcJ_T0079641.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115819164 115822964 - MGP_BALBcJ_P0079641 Fxyd4 protein_coding protein_coding MGP_BALBcJ_T0079642.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115819164 115822964 - MGP_BALBcJ_P0079642 Fxyd4 protein_coding protein_coding MGP_BALBcJ_T0079643.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115819164 115822964 - MGP_BALBcJ_P0079643 Fxyd4 protein_coding protein_coding MGP_BALBcJ_T0079644.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115819164 115822964 - MGP_BALBcJ_P0079644 Fxyd4 protein_coding protein_coding MGP_BALBcJ_T0079645.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115819333 115822964 - MGP_BALBcJ_P0079645 Fxyd4 protein_coding protein_coding MGP_BALBcJ_T0079646.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115820441 115822964 - Fxyd4 protein_coding retained_intron MGP_BALBcJ_T0079647.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115820451 115821582 - Fxyd4 protein_coding retained_intron MGP_BALBcJ_T0079648.1 MGP_BALBcJ_G0031161.1 mouse_genomes_project 6 115820453 115822964 - Fxyd4 protein_coding retained_intron MGP_BALBcJ_T0005052.1 MGP_BALBcJ_G0004313.1 mouse_genomes_project 6 119145768 119147974 - Gm15856 antisense antisense MGP_BALBcJ_T0008504.1 MGP_BALBcJ_G0006884.1 mouse_genomes_project 6 25768968 25817892 + Gm3294 lincRNA lincRNA MGP_BALBcJ_T0080878.1 MGP_BALBcJ_G0031446.1 mouse_genomes_project 6 141196078 141201209 + MGP_BALBcJ_P0080878 Spx protein_coding protein_coding MGP_BALBcJ_T0080879.1 MGP_BALBcJ_G0031446.1 mouse_genomes_project 6 141196078 141201209 + MGP_BALBcJ_P0080879 Spx protein_coding unknown_likely_coding MGP_BALBcJ_T0080880.1 MGP_BALBcJ_G0031446.1 mouse_genomes_project 6 141196649 141202370 + Spx protein_coding retained_intron MGP_BALBcJ_T0080881.1 MGP_BALBcJ_G0031446.1 mouse_genomes_project 6 141197158 141202370 + Spx protein_coding retained_intron MGP_BALBcJ_T0102620.1 MGP_BALBcJ_G0040436.1 mouse_genomes_project 6 55420237 55421131 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000305.1 MGP_BALBcJ_G0000246.1 mouse_genomes_project 6 67235809 67236127 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008533.1 MGP_BALBcJ_G0006903.1 mouse_genomes_project 6 29560203 29560862 - BC049739 lincRNA lincRNA MGP_BALBcJ_T0001908.1 MGP_BALBcJ_G0001821.1 mouse_genomes_project 6 1665849 1669998 + TEC TEC MGP_BALBcJ_T0015205.1 MGP_BALBcJ_G0013302.1 mouse_genomes_project 6 1102473 1102795 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077081.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36345369 36370151 - MGP_BALBcJ_P0077081 Mkrn1 protein_coding protein_coding MGP_BALBcJ_T0077082.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36346707 36353624 - MGP_BALBcJ_P0077082 Mkrn1 protein_coding protein_coding MGP_BALBcJ_T0077083.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36348318 36369935 - MGP_BALBcJ_P0077083 Mkrn1 protein_coding protein_coding MGP_BALBcJ_T0077084.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36348324 36370226 - MGP_BALBcJ_P0077084 Mkrn1 protein_coding protein_coding MGP_BALBcJ_T0077085.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36348839 36353975 - Mkrn1 protein_coding retained_intron MGP_BALBcJ_T0077086.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36353704 36369625 - MGP_BALBcJ_P0077086 Mkrn1 protein_coding protein_coding MGP_BALBcJ_T0077087.1 MGP_BALBcJ_G0030580.1 mouse_genomes_project 6 36354432 36370166 - MGP_BALBcJ_P0077087 Mkrn1 protein_coding protein_coding MGP_BALBcJ_T0079518.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113755632 113828405 + MGP_BALBcJ_P0079518 Ift122 protein_coding protein_coding MGP_BALBcJ_T0079519.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113755692 113828396 + MGP_BALBcJ_P0079519 Ift122 protein_coding protein_coding MGP_BALBcJ_T0079520.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113755742 113828399 + MGP_BALBcJ_P0079520 Ift122 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079521.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113755750 113758241 + Ift122 protein_coding retained_intron MGP_BALBcJ_T0079522.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113755797 113828036 + MGP_BALBcJ_P0079522 Ift122 protein_coding protein_coding MGP_BALBcJ_T0079523.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113755807 113778002 + Ift122 protein_coding processed_transcript MGP_BALBcJ_T0079524.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113779971 113790343 + Ift122 protein_coding processed_transcript MGP_BALBcJ_T0079525.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113788895 113790348 + Ift122 protein_coding processed_transcript MGP_BALBcJ_T0079526.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113790127 113791820 + Ift122 protein_coding retained_intron MGP_BALBcJ_T0079527.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113796958 113803077 + Ift122 protein_coding retained_intron MGP_BALBcJ_T0079528.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113802567 113828400 + Ift122 protein_coding processed_transcript MGP_BALBcJ_T0079529.1 MGP_BALBcJ_G0031138.1 mouse_genomes_project 6 113806084 113828401 + Ift122 protein_coding retained_intron MGP_BALBcJ_T0011600.1 MGP_BALBcJ_G0009725.1 mouse_genomes_project 6 3595939 3596085 - Dlx6os1 misc_RNA misc_RNA MGP_BALBcJ_T0008736.1 MGP_BALBcJ_G0007056.1 mouse_genomes_project 6 138122580 138129569 - 4922502N22Rik lincRNA lincRNA MGP_BALBcJ_T0101946.1 MGP_BALBcJ_G0039809.1 mouse_genomes_project 6 121963280 122014511 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101947.1 MGP_BALBcJ_G0039809.1 mouse_genomes_project 6 121989635 122010379 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0015460.1 MGP_BALBcJ_G0013557.1 mouse_genomes_project 6 88222548 88223130 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078559.1 MGP_BALBcJ_G0030951.1 mouse_genomes_project 6 84275369 84279782 + MGP_BALBcJ_P0078559 Fam136a protein_coding protein_coding MGP_BALBcJ_T0078560.1 MGP_BALBcJ_G0030951.1 mouse_genomes_project 6 84275437 84276743 + Fam136a protein_coding retained_intron MGP_BALBcJ_T0078561.1 MGP_BALBcJ_G0030951.1 mouse_genomes_project 6 84275447 84278522 + MGP_BALBcJ_P0078561 Fam136a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078601.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84348638 84380137 + MGP_BALBcJ_P0078601 C87436 protein_coding protein_coding MGP_BALBcJ_T0078602.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84348653 84355802 + MGP_BALBcJ_P0078602 C87436 protein_coding protein_coding MGP_BALBcJ_T0078603.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84348956 84380137 + MGP_BALBcJ_P0078603 C87436 protein_coding protein_coding MGP_BALBcJ_T0078604.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84348956 84380137 + MGP_BALBcJ_P0078604 C87436 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078605.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84348972 84349753 + C87436 protein_coding processed_transcript MGP_BALBcJ_T0078606.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84348991 84380137 + MGP_BALBcJ_P0078606 C87436 protein_coding protein_coding MGP_BALBcJ_T0078607.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84353847 84383247 + MGP_BALBcJ_P0078607 C87436 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078608.1 MGP_BALBcJ_G0030956.1 mouse_genomes_project 6 84373789 84379696 + C87436 protein_coding processed_transcript MGP_BALBcJ_T0078862.1 MGP_BALBcJ_G0031012.1 mouse_genomes_project 6 88257807 88258671 + MGP_BALBcJ_P0078862 Vmn1r54 protein_coding protein_coding MGP_BALBcJ_T0077348.1 MGP_BALBcJ_G0030671.1 mouse_genomes_project 6 45127148 45153686 - MGP_BALBcJ_P0077348 Zfp777 protein_coding protein_coding MGP_BALBcJ_T0077349.1 MGP_BALBcJ_G0030671.1 mouse_genomes_project 6 45127165 45154658 - MGP_BALBcJ_P0077349 Zfp777 protein_coding protein_coding MGP_BALBcJ_T0077350.1 MGP_BALBcJ_G0030671.1 mouse_genomes_project 6 45132326 45147418 - MGP_BALBcJ_P0077350 Zfp777 protein_coding protein_coding MGP_BALBcJ_T0077351.1 MGP_BALBcJ_G0030671.1 mouse_genomes_project 6 45147337 45153686 - MGP_BALBcJ_P0077351 Zfp777 protein_coding protein_coding MGP_BALBcJ_T0077352.1 MGP_BALBcJ_G0030671.1 mouse_genomes_project 6 45147619 45150966 - MGP_BALBcJ_P0077352 Zfp777 protein_coding protein_coding MGP_BALBcJ_T0008485.1 MGP_BALBcJ_G0006870.1 mouse_genomes_project 6 7610652 7685274 + Gm44004 lincRNA lincRNA MGP_BALBcJ_T0079816.1 MGP_BALBcJ_G0031188.1 mouse_genomes_project 6 118691797 118712201 + MGP_BALBcJ_P0079816 Slc25a18 protein_coding protein_coding MGP_BALBcJ_T0079134.1 MGP_BALBcJ_G0031066.1 mouse_genomes_project 6 98649066 98756461 - MGP_BALBcJ_P0079134 Shq1 protein_coding protein_coding MGP_BALBcJ_T0079135.1 MGP_BALBcJ_G0031066.1 mouse_genomes_project 6 98654108 98756461 - MGP_BALBcJ_P0079135 Shq1 protein_coding protein_coding MGP_BALBcJ_T0079136.1 MGP_BALBcJ_G0031066.1 mouse_genomes_project 6 98654109 98756443 - MGP_BALBcJ_P0079136 Shq1 protein_coding protein_coding MGP_BALBcJ_T0079137.1 MGP_BALBcJ_G0031066.1 mouse_genomes_project 6 98748139 98756437 - Shq1 protein_coding processed_transcript MGP_BALBcJ_T0015383.1 MGP_BALBcJ_G0013480.1 mouse_genomes_project 6 64664139 64664604 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000300.1 MGP_BALBcJ_G0000241.1 mouse_genomes_project 6 66979880 66980356 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0077887.1 MGP_BALBcJ_G0030808.1 mouse_genomes_project 6 62602913 62630959 - MGP_BALBcJ_P0077887 Hpgds protein_coding protein_coding MGP_BALBcJ_T0077888.1 MGP_BALBcJ_G0030808.1 mouse_genomes_project 6 62604657 62608543 - Hpgds protein_coding retained_intron MGP_BALBcJ_T0077889.1 MGP_BALBcJ_G0030808.1 mouse_genomes_project 6 62617589 62623881 - Hpgds protein_coding retained_intron MGP_BALBcJ_T0098383.1 MGP_BALBcJ_G0036437.1 mouse_genomes_project 6 49426562 49427011 - pseudogene pseudogene MGP_BALBcJ_T0008738.1 MGP_BALBcJ_G0007058.1 mouse_genomes_project 6 139763269 139847656 + Gm30524 lincRNA lincRNA MGP_BALBcJ_T0008739.1 MGP_BALBcJ_G0007058.1 mouse_genomes_project 6 139763295 139845956 + Gm30524 lincRNA lincRNA MGP_BALBcJ_T0078272.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80882009 80883129 + MGP_BALBcJ_P0078272 Pcgf1 protein_coding protein_coding MGP_BALBcJ_T0078273.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80882486 80884989 + MGP_BALBcJ_P0078273 Pcgf1 protein_coding protein_coding MGP_BALBcJ_T0078274.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80882562 80884996 + MGP_BALBcJ_P0078274 Pcgf1 protein_coding protein_coding MGP_BALBcJ_T0078275.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80882770 80884891 + MGP_BALBcJ_P0078275 Pcgf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078276.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80882831 80884891 + MGP_BALBcJ_P0078276 Pcgf1 protein_coding protein_coding MGP_BALBcJ_T0078277.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80882858 80883844 + Pcgf1 protein_coding retained_intron MGP_BALBcJ_T0078278.1 MGP_BALBcJ_G0030894.1 mouse_genomes_project 6 80884153 80884988 + Pcgf1 protein_coding retained_intron MGP_BALBcJ_T0076662.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26271173 26282138 - Kcp protein_coding retained_intron MGP_BALBcJ_T0076663.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26280029 26293867 - MGP_BALBcJ_P0076663 Kcp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076664.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26280029 26282854 - MGP_BALBcJ_P0076664 Kcp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076665.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26280029 26305891 - MGP_BALBcJ_P0076665 Kcp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076666.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26280238 26305880 - MGP_BALBcJ_P0076666 Kcp protein_coding protein_coding MGP_BALBcJ_T0076667.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26281686 26282966 - Kcp protein_coding retained_intron MGP_BALBcJ_T0076668.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26294797 26296561 - Kcp protein_coding retained_intron MGP_BALBcJ_T0076669.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26295882 26300778 - MGP_BALBcJ_P0076669 Kcp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076670.1 MGP_BALBcJ_G0030509.1 mouse_genomes_project 6 26300243 26305906 - MGP_BALBcJ_P0076670 Kcp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077969.1 MGP_BALBcJ_G0030833.1 mouse_genomes_project 6 68869530 68885808 - MGP_BALBcJ_P0077969 Thnsl2 protein_coding protein_coding MGP_BALBcJ_T0077970.1 MGP_BALBcJ_G0030833.1 mouse_genomes_project 6 68869762 68885716 - MGP_BALBcJ_P0077970 Thnsl2 protein_coding protein_coding MGP_BALBcJ_T0077971.1 MGP_BALBcJ_G0030833.1 mouse_genomes_project 6 68870020 68873341 - MGP_BALBcJ_P0077971 Thnsl2 protein_coding protein_coding MGP_BALBcJ_T0077972.1 MGP_BALBcJ_G0030833.1 mouse_genomes_project 6 68873134 68885700 - Thnsl2 protein_coding processed_transcript MGP_BALBcJ_T0080540.1 MGP_BALBcJ_G0031358.1 mouse_genomes_project 6 130066435 130067399 - MGP_BALBcJ_P0080540 Tas2r105 protein_coding protein_coding MGP_BALBcJ_T0077808.1 MGP_BALBcJ_G0030790.1 mouse_genomes_project 6 55192900 55193809 - MGP_BALBcJ_P0077808 protein_coding protein_coding MGP_BALBcJ_T0002029.1 MGP_BALBcJ_G0001942.1 mouse_genomes_project 6 78124368 78126030 + TEC TEC MGP_BALBcJ_T0080285.1 MGP_BALBcJ_G0031283.1 mouse_genomes_project 6 124908072 124935493 - MGP_BALBcJ_P0080285 Ndufa9 protein_coding protein_coding MGP_BALBcJ_T0080286.1 MGP_BALBcJ_G0031283.1 mouse_genomes_project 6 124908347 124935493 - MGP_BALBcJ_P0080286 Ndufa9 protein_coding protein_coding MGP_BALBcJ_T0080287.1 MGP_BALBcJ_G0031283.1 mouse_genomes_project 6 124930109 124935504 - Ndufa9 protein_coding retained_intron MGP_BALBcJ_T0005610.1 MGP_BALBcJ_G0004725.1 mouse_genomes_project 6 114108516 114117100 - 9530062K07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0101273.1 MGP_BALBcJ_G0039309.1 mouse_genomes_project 6 82997362 82997478 + Gm22893 snoRNA snoRNA MGP_BALBcJ_T0100026.1 MGP_BALBcJ_G0038062.1 mouse_genomes_project 6 111051535 111051627 - Gm23244 snRNA snRNA MGP_BALBcJ_T0000294.1 MGP_BALBcJ_G0000235.1 mouse_genomes_project 6 66503829 66504225 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0004912.1 MGP_BALBcJ_G0004220.1 mouse_genomes_project 6 35997183 36000902 - 1700025N23Rik antisense antisense MGP_BALBcJ_T0077581.1 MGP_BALBcJ_G0030725.1 mouse_genomes_project 6 49398309 49401143 - MGP_BALBcJ_P0077581 Hoxa5 protein_coding protein_coding MGP_BALBcJ_T0079048.1 MGP_BALBcJ_G0031051.1 mouse_genomes_project 6 94867908 95094704 - MGP_BALBcJ_P0079048 Fam19a4 protein_coding protein_coding MGP_BALBcJ_T0079049.1 MGP_BALBcJ_G0031051.1 mouse_genomes_project 6 95090916 95094684 - Fam19a4 protein_coding retained_intron MGP_BALBcJ_T0101278.1 MGP_BALBcJ_G0039314.1 mouse_genomes_project 6 95204593 95204724 - Gm26175 snoRNA snoRNA MGP_BALBcJ_T0077133.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37432494 37445840 + MGP_BALBcJ_P0077133 Ssbp1 protein_coding protein_coding MGP_BALBcJ_T0077134.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37432557 37439741 + MGP_BALBcJ_P0077134 Ssbp1 protein_coding protein_coding MGP_BALBcJ_T0077135.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37432595 37435432 + Ssbp1 protein_coding retained_intron MGP_BALBcJ_T0077136.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37432610 37442135 + MGP_BALBcJ_P0077136 Ssbp1 protein_coding protein_coding MGP_BALBcJ_T0077137.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37432617 37442132 + MGP_BALBcJ_P0077137 Ssbp1 protein_coding protein_coding MGP_BALBcJ_T0077138.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37432668 37437654 + MGP_BALBcJ_P0077138 Ssbp1 protein_coding protein_coding MGP_BALBcJ_T0077139.1 MGP_BALBcJ_G0030591.1 mouse_genomes_project 6 37437621 37438604 + Ssbp1 protein_coding retained_intron MGP_BALBcJ_T0015653.1 MGP_BALBcJ_G0013750.1 mouse_genomes_project 6 147012721 147013124 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004892.1 MGP_BALBcJ_G0004203.1 mouse_genomes_project 6 18609364 18610430 + Gm42582 antisense antisense MGP_BALBcJ_T0076907.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653200 31719203 + Agbl3 protein_coding retained_intron MGP_BALBcJ_T0076908.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653200 31730024 + MGP_BALBcJ_P0076908 Agbl3 protein_coding protein_coding MGP_BALBcJ_T0076909.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653200 31730024 + MGP_BALBcJ_P0076909 Agbl3 protein_coding protein_coding MGP_BALBcJ_T0076910.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653210 31676797 + MGP_BALBcJ_P0076910 Agbl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076911.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653220 31672050 + Agbl3 protein_coding retained_intron MGP_BALBcJ_T0076912.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653616 31731551 + MGP_BALBcJ_P0076912 Agbl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076913.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653643 31678639 + Agbl3 protein_coding retained_intron MGP_BALBcJ_T0076914.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653643 31658488 + MGP_BALBcJ_P0076914 Agbl3 protein_coding protein_coding MGP_BALBcJ_T0076915.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653644 31674618 + Agbl3 protein_coding retained_intron MGP_BALBcJ_T0076916.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653657 31658413 + MGP_BALBcJ_P0076916 Agbl3 protein_coding protein_coding MGP_BALBcJ_T0076917.1 MGP_BALBcJ_G0030545.1 mouse_genomes_project 6 31653658 31658452 + MGP_BALBcJ_P0076917 Agbl3 protein_coding protein_coding MGP_BALBcJ_T0008617.1 MGP_BALBcJ_G0006966.1 mouse_genomes_project 6 76711781 76712101 - Gm29005 lincRNA lincRNA MGP_BALBcJ_T0015622.1 MGP_BALBcJ_G0013719.1 mouse_genomes_project 6 131990338 131990566 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078610.1 MGP_BALBcJ_G0030958.1 mouse_genomes_project 6 84545515 84547062 + MGP_BALBcJ_P0078610 Asprv1 protein_coding protein_coding MGP_BALBcJ_T0015490.1 MGP_BALBcJ_G0013587.1 mouse_genomes_project 6 99722371 99722827 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005102.1 MGP_BALBcJ_G0004356.1 mouse_genomes_project 6 143977488 143982717 + Gm15543 antisense antisense MGP_BALBcJ_T0010767.1 MGP_BALBcJ_G0008892.1 mouse_genomes_project 6 84491370 84491432 - Gm22184 miRNA miRNA MGP_BALBcJ_T0011650.1 MGP_BALBcJ_G0009775.1 mouse_genomes_project 6 125936354 125936653 + Gm23098 misc_RNA misc_RNA MGP_BALBcJ_T0015391.1 MGP_BALBcJ_G0013488.1 mouse_genomes_project 6 65072608 65073663 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015629.1 MGP_BALBcJ_G0013726.1 mouse_genomes_project 6 135197719 135202578 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002187.1 MGP_BALBcJ_G0002099.1 mouse_genomes_project 6 148343013 148346266 + TEC TEC MGP_BALBcJ_T0004940.1 MGP_BALBcJ_G0004239.1 mouse_genomes_project 6 51024045 51076730 + Gm43938 antisense antisense MGP_BALBcJ_T0002073.1 MGP_BALBcJ_G0001986.1 mouse_genomes_project 6 88491465 88491978 + TEC TEC MGP_BALBcJ_T0080419.1 MGP_BALBcJ_G0031314.1 mouse_genomes_project 6 127023029 127092740 - MGP_BALBcJ_P0080419 BC035044 protein_coding protein_coding MGP_BALBcJ_T0015273.1 MGP_BALBcJ_G0013370.1 mouse_genomes_project 6 34430783 34431330 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080616.1 MGP_BALBcJ_G0031392.1 mouse_genomes_project 6 133570238 133575499 + MGP_BALBcJ_P0080616 Cdkn1b protein_coding protein_coding MGP_BALBcJ_T0080617.1 MGP_BALBcJ_G0031392.1 mouse_genomes_project 6 133570238 133575499 + MGP_BALBcJ_P0080617 Cdkn1b protein_coding protein_coding MGP_BALBcJ_T0080618.1 MGP_BALBcJ_G0031392.1 mouse_genomes_project 6 133570351 133575303 + MGP_BALBcJ_P0080618 Cdkn1b protein_coding protein_coding MGP_BALBcJ_T0002038.1 MGP_BALBcJ_G0001951.1 mouse_genomes_project 6 81236787 81240336 - TEC TEC MGP_BALBcJ_T0077230.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325437 39326956 + MGP_BALBcJ_P0077230 Zyx protein_coding protein_coding MGP_BALBcJ_T0077231.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325587 39327415 + MGP_BALBcJ_P0077231 Zyx protein_coding protein_coding MGP_BALBcJ_T0077232.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325635 39334358 + MGP_BALBcJ_P0077232 Zyx protein_coding protein_coding MGP_BALBcJ_T0077233.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325676 39334188 + MGP_BALBcJ_P0077233 Zyx protein_coding protein_coding MGP_BALBcJ_T0077234.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325840 39334188 + Zyx protein_coding retained_intron MGP_BALBcJ_T0077235.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325840 39334188 + MGP_BALBcJ_P0077235 Zyx protein_coding protein_coding MGP_BALBcJ_T0077236.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325845 39327572 + Zyx protein_coding processed_transcript MGP_BALBcJ_T0077237.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325846 39336009 + MGP_BALBcJ_P0077237 Zyx protein_coding protein_coding MGP_BALBcJ_T0077238.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39325878 39326872 + MGP_BALBcJ_P0077238 Zyx protein_coding protein_coding MGP_BALBcJ_T0077239.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39329285 39331833 + Zyx protein_coding processed_transcript MGP_BALBcJ_T0077240.1 MGP_BALBcJ_G0030631.1 mouse_genomes_project 6 39330932 39332057 + Zyx protein_coding processed_transcript MGP_BALBcJ_T0080700.1 MGP_BALBcJ_G0031413.1 mouse_genomes_project 6 135673382 135696547 - MGP_BALBcJ_P0080700 Erp27 protein_coding protein_coding MGP_BALBcJ_T0080701.1 MGP_BALBcJ_G0031413.1 mouse_genomes_project 6 135675828 135696547 - Erp27 protein_coding retained_intron MGP_BALBcJ_T0080702.1 MGP_BALBcJ_G0031413.1 mouse_genomes_project 6 135694032 135696507 - Erp27 protein_coding retained_intron MGP_BALBcJ_T0077815.1 MGP_BALBcJ_G0030796.1 mouse_genomes_project 6 55774765 55775818 - MGP_BALBcJ_P0077815 Vmn1r30 protein_coding protein_coding MGP_BALBcJ_T0101297.1 MGP_BALBcJ_G0039333.1 mouse_genomes_project 6 123269918 123270243 - Scarna10 snoRNA snoRNA MGP_BALBcJ_T0008668.1 MGP_BALBcJ_G0007002.1 mouse_genomes_project 6 98575032 98576431 + Gm44107 lincRNA lincRNA MGP_BALBcJ_T0076941.1 MGP_BALBcJ_G0030550.1 mouse_genomes_project 6 31818299 31852431 - MGP_BALBcJ_P0076941 protein_coding protein_coding MGP_BALBcJ_T0076942.1 MGP_BALBcJ_G0030550.1 mouse_genomes_project 6 31818956 31862835 - MGP_BALBcJ_P0076942 protein_coding protein_coding MGP_BALBcJ_T0076943.1 MGP_BALBcJ_G0030550.1 mouse_genomes_project 6 31820524 31821599 - protein_coding processed_transcript MGP_BALBcJ_T0076944.1 MGP_BALBcJ_G0030550.1 mouse_genomes_project 6 31821457 31828925 - MGP_BALBcJ_P0076944 protein_coding protein_coding MGP_BALBcJ_T0076945.1 MGP_BALBcJ_G0030550.1 mouse_genomes_project 6 31826860 31853486 - MGP_BALBcJ_P0076945 protein_coding protein_coding MGP_BALBcJ_T0080334.1 MGP_BALBcJ_G0031294.1 mouse_genomes_project 6 125774623 125856342 - MGP_BALBcJ_P0080334 Prmt8 protein_coding protein_coding MGP_BALBcJ_T0079956.1 MGP_BALBcJ_G0031217.1 mouse_genomes_project 6 121041474 121073522 + MGP_BALBcJ_P0079956 Clec4a4 protein_coding protein_coding MGP_BALBcJ_T0004999.1 MGP_BALBcJ_G0004277.1 mouse_genomes_project 6 85910716 85914014 + Gm5577 antisense antisense MGP_BALBcJ_T0005000.1 MGP_BALBcJ_G0004277.1 mouse_genomes_project 6 85911516 85914006 + Gm5577 antisense antisense MGP_BALBcJ_T0005001.1 MGP_BALBcJ_G0004277.1 mouse_genomes_project 6 85911516 85934820 + Gm5577 antisense antisense MGP_BALBcJ_T0078019.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69580738 69624445 + MGP_BALBcJ_P0078019 Immt protein_coding protein_coding MGP_BALBcJ_T0078020.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69580755 69604845 + Immt protein_coding retained_intron MGP_BALBcJ_T0078021.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69580756 69610762 + MGP_BALBcJ_P0078021 Immt protein_coding protein_coding MGP_BALBcJ_T0078022.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69580808 69627396 + MGP_BALBcJ_P0078022 Immt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078023.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69580835 69606614 + MGP_BALBcJ_P0078023 Immt protein_coding protein_coding MGP_BALBcJ_T0078024.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69613070 69616539 + Immt protein_coding retained_intron MGP_BALBcJ_T0078025.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69619543 69622593 + Immt protein_coding retained_intron MGP_BALBcJ_T0078026.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69620647 69625265 + Immt protein_coding retained_intron MGP_BALBcJ_T0078027.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69621011 69624047 + MGP_BALBcJ_P0078027 Immt protein_coding protein_coding MGP_BALBcJ_T0078028.1 MGP_BALBcJ_G0030845.1 mouse_genomes_project 6 69621050 69627399 + MGP_BALBcJ_P0078028 Immt protein_coding protein_coding MGP_BALBcJ_T0076970.1 MGP_BALBcJ_G0030557.1 mouse_genomes_project 6 33586967 33684298 - MGP_BALBcJ_P0076970 Ptn protein_coding protein_coding MGP_BALBcJ_T0076971.1 MGP_BALBcJ_G0030557.1 mouse_genomes_project 6 33612217 33684257 - MGP_BALBcJ_P0076971 Ptn protein_coding protein_coding MGP_BALBcJ_T0015312.1 MGP_BALBcJ_G0013409.1 mouse_genomes_project 6 46129155 46130628 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079010.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91721727 92337002 - MGP_BALBcJ_P0079010 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079011.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91721727 92336407 - MGP_BALBcJ_P0079011 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079012.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91721727 92336407 - MGP_BALBcJ_P0079012 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079013.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91724301 91962955 - MGP_BALBcJ_P0079013 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079014.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91727743 91962819 - MGP_BALBcJ_P0079014 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079015.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91728332 91962226 - MGP_BALBcJ_P0079015 Magi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079016.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91729166 92336407 - MGP_BALBcJ_P0079016 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079017.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91729275 92336980 - MGP_BALBcJ_P0079017 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079018.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91820629 91961768 - MGP_BALBcJ_P0079018 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079019.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 91832712 91840373 - MGP_BALBcJ_P0079019 Magi1 protein_coding protein_coding MGP_BALBcJ_T0079020.1 MGP_BALBcJ_G0031043.1 mouse_genomes_project 6 92182337 92336110 - Magi1 protein_coding processed_transcript MGP_BALBcJ_T0102595.1 MGP_BALBcJ_G0040411.1 mouse_genomes_project 6 25254053 25256745 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008618.1 MGP_BALBcJ_G0006967.1 mouse_genomes_project 6 79481992 79523045 - Gm43902 lincRNA lincRNA MGP_BALBcJ_T0077158.1 MGP_BALBcJ_G0030600.1 mouse_genomes_project 6 37851388 37860078 - MGP_BALBcJ_P0077158 Moxd2 protein_coding protein_coding MGP_BALBcJ_T0080876.1 MGP_BALBcJ_G0031445.1 mouse_genomes_project 6 141173041 141186475 + MGP_BALBcJ_P0080876 Golt1b protein_coding protein_coding MGP_BALBcJ_T0080877.1 MGP_BALBcJ_G0031445.1 mouse_genomes_project 6 141173073 141184327 + Golt1b protein_coding processed_transcript MGP_BALBcJ_T0079971.1 MGP_BALBcJ_G0031222.1 mouse_genomes_project 6 121305764 121318573 + MGP_BALBcJ_P0079971 Clec4d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079972.1 MGP_BALBcJ_G0031222.1 mouse_genomes_project 6 121305770 121318915 + MGP_BALBcJ_P0079972 Clec4d protein_coding protein_coding MGP_BALBcJ_T0079973.1 MGP_BALBcJ_G0031222.1 mouse_genomes_project 6 121311375 121318362 + Clec4d protein_coding retained_intron MGP_BALBcJ_T0008616.1 MGP_BALBcJ_G0006965.1 mouse_genomes_project 6 73767934 73774881 - Gm44113 lincRNA lincRNA MGP_BALBcJ_T0077588.1 MGP_BALBcJ_G0030728.1 mouse_genomes_project 6 49419584 49423853 - MGP_BALBcJ_P0077588 Hoxa9 protein_coding protein_coding MGP_BALBcJ_T0077589.1 MGP_BALBcJ_G0030728.1 mouse_genomes_project 6 49420447 49427569 - Hoxa9 protein_coding processed_transcript MGP_BALBcJ_T0077590.1 MGP_BALBcJ_G0030728.1 mouse_genomes_project 6 49420605 49422672 - MGP_BALBcJ_P0077590 Hoxa9 protein_coding protein_coding MGP_BALBcJ_T0077591.1 MGP_BALBcJ_G0030728.1 mouse_genomes_project 6 49420807 49426762 - Hoxa9 protein_coding processed_transcript MGP_BALBcJ_T0077592.1 MGP_BALBcJ_G0030728.1 mouse_genomes_project 6 49424729 49427013 - Hoxa9 protein_coding retained_intron MGP_BALBcJ_T0015534.1 MGP_BALBcJ_G0013631.1 mouse_genomes_project 6 115106006 115106383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078658.1 MGP_BALBcJ_G0030966.1 mouse_genomes_project 6 85034773 85042422 + MGP_BALBcJ_P0078658 D6Ertd527e protein_coding protein_coding MGP_BALBcJ_T0078659.1 MGP_BALBcJ_G0030966.1 mouse_genomes_project 6 85034775 85042478 + MGP_BALBcJ_P0078659 D6Ertd527e protein_coding protein_coding MGP_BALBcJ_T0078660.1 MGP_BALBcJ_G0030966.1 mouse_genomes_project 6 85034775 85042479 + MGP_BALBcJ_P0078660 D6Ertd527e protein_coding protein_coding MGP_BALBcJ_T0078661.1 MGP_BALBcJ_G0030966.1 mouse_genomes_project 6 85034809 85040889 + D6Ertd527e protein_coding processed_transcript MGP_BALBcJ_T0078662.1 MGP_BALBcJ_G0030966.1 mouse_genomes_project 6 85034840 85040881 + D6Ertd527e protein_coding processed_transcript MGP_BALBcJ_T0077411.1 MGP_BALBcJ_G0030683.1 mouse_genomes_project 6 45722883 45743548 + MGP_BALBcJ_P0077411 Zfp775 protein_coding protein_coding MGP_BALBcJ_T0077412.1 MGP_BALBcJ_G0030683.1 mouse_genomes_project 6 45726436 45740132 + MGP_BALBcJ_P0077412 Zfp775 protein_coding protein_coding MGP_BALBcJ_T0077413.1 MGP_BALBcJ_G0030683.1 mouse_genomes_project 6 45733549 45743548 + MGP_BALBcJ_P0077413 Zfp775 protein_coding protein_coding MGP_BALBcJ_T0101239.1 MGP_BALBcJ_G0039275.1 mouse_genomes_project 6 17751830 17751961 - Gm23960 snoRNA snoRNA MGP_BALBcJ_T0001917.1 MGP_BALBcJ_G0001830.1 mouse_genomes_project 6 9590672 9591615 + TEC TEC MGP_BALBcJ_T0002652.1 MGP_BALBcJ_G0002538.1 mouse_genomes_project 6 38079989 38080507 + MGP_BALBcJ_P0002652 Trbv12-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0015448.1 MGP_BALBcJ_G0013545.1 mouse_genomes_project 6 82992472 82993412 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101924.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45048204 45059303 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101925.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45048228 45052941 + transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0101926.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45048236 45052957 + transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0101927.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45048241 45057907 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101928.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45048241 45051523 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101929.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45048283 45058328 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101930.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45050293 45053743 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101931.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45050361 45056092 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101932.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45050752 45061002 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101933.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45050765 45058329 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101934.1 MGP_BALBcJ_G0039802.1 mouse_genomes_project 6 45051469 45058328 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0000271.1 MGP_BALBcJ_G0000212.1 mouse_genomes_project 6 65195337 65195834 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0076602.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25913080 25954700 - MGP_BALBcJ_P0076602 Rbm28 protein_coding unknown_likely_coding MGP_BALBcJ_T0076603.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25913090 25955098 - MGP_BALBcJ_P0076603 Rbm28 protein_coding protein_coding MGP_BALBcJ_T0076604.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25914651 25944841 - Rbm28 protein_coding retained_intron MGP_BALBcJ_T0076605.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25914685 25920743 - MGP_BALBcJ_P0076605 Rbm28 protein_coding protein_coding MGP_BALBcJ_T0076606.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25917118 25954700 - MGP_BALBcJ_P0076606 Rbm28 protein_coding unknown_likely_coding MGP_BALBcJ_T0076607.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25926867 25942600 - Rbm28 protein_coding retained_intron MGP_BALBcJ_T0076608.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25946429 25949956 - Rbm28 protein_coding retained_intron MGP_BALBcJ_T0076609.1 MGP_BALBcJ_G0030497.1 mouse_genomes_project 6 25946889 25949731 - Rbm28 protein_coding retained_intron MGP_BALBcJ_T0011618.1 MGP_BALBcJ_G0009743.1 mouse_genomes_project 6 44887761 44887863 + Rny3 misc_RNA misc_RNA MGP_BALBcJ_T0079595.1 MGP_BALBcJ_G0031148.1 mouse_genomes_project 6 114393848 114399310 + MGP_BALBcJ_P0079595 Olfr211 protein_coding protein_coding MGP_BALBcJ_T0079596.1 MGP_BALBcJ_G0031148.1 mouse_genomes_project 6 114398380 114399310 + MGP_BALBcJ_P0079596 Olfr211 protein_coding protein_coding MGP_BALBcJ_T0008740.1 MGP_BALBcJ_G0007059.1 mouse_genomes_project 6 140660539 140669580 + Gm44244 lincRNA lincRNA MGP_BALBcJ_T0002137.1 MGP_BALBcJ_G0002049.1 mouse_genomes_project 6 125396865 125399091 + TEC TEC MGP_BALBcJ_T0077714.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52683890 52730701 + MGP_BALBcJ_P0077714 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077715.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52683940 52733241 + MGP_BALBcJ_P0077715 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077716.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52683969 52710024 + MGP_BALBcJ_P0077716 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077717.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52684089 52692139 + MGP_BALBcJ_P0077717 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077718.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52692129 52728967 + MGP_BALBcJ_P0077718 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077719.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52692129 52728967 + MGP_BALBcJ_P0077719 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077720.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52692129 52728967 + MGP_BALBcJ_P0077720 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0077721.1 MGP_BALBcJ_G0030755.1 mouse_genomes_project 6 52692129 52729224 + MGP_BALBcJ_P0077721 Adcyap1r1 protein_coding protein_coding MGP_BALBcJ_T0008702.1 MGP_BALBcJ_G0007032.1 mouse_genomes_project 6 122309287 122312517 + Gm43971 lincRNA lincRNA MGP_BALBcJ_T0002012.1 MGP_BALBcJ_G0001925.1 mouse_genomes_project 6 70654222 70655178 - TEC TEC MGP_BALBcJ_T0078811.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835651 86845624 + MGP_BALBcJ_P0078811 Tpra1 protein_coding protein_coding MGP_BALBcJ_T0078812.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835682 86842798 + Tpra1 protein_coding processed_transcript MGP_BALBcJ_T0078813.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835700 86839481 + Tpra1 protein_coding retained_intron MGP_BALBcJ_T0078814.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835700 86839948 + Tpra1 protein_coding processed_transcript MGP_BALBcJ_T0078815.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835720 86843747 + Tpra1 protein_coding processed_transcript MGP_BALBcJ_T0078816.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835725 86843611 + MGP_BALBcJ_P0078816 Tpra1 protein_coding protein_coding MGP_BALBcJ_T0078817.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835735 86843595 + MGP_BALBcJ_P0078817 Tpra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078818.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86835836 86845615 + MGP_BALBcJ_P0078818 Tpra1 protein_coding protein_coding MGP_BALBcJ_T0078819.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86839017 86842685 + Tpra1 protein_coding processed_transcript MGP_BALBcJ_T0078820.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86839338 86841144 + Tpra1 protein_coding processed_transcript MGP_BALBcJ_T0078821.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86839340 86845131 + MGP_BALBcJ_P0078821 Tpra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078822.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86839358 86844204 + MGP_BALBcJ_P0078822 Tpra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078823.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86839424 86844032 + MGP_BALBcJ_P0078823 Tpra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078824.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86841358 86845622 + MGP_BALBcJ_P0078824 Tpra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078825.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86841372 86844485 + MGP_BALBcJ_P0078825 Tpra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078826.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86841571 86842911 + Tpra1 protein_coding processed_transcript MGP_BALBcJ_T0078827.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86841571 86842927 + Tpra1 protein_coding retained_intron MGP_BALBcJ_T0078828.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86843541 86844333 + Tpra1 protein_coding retained_intron MGP_BALBcJ_T0078829.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86843606 86843882 + Tpra1 protein_coding retained_intron MGP_BALBcJ_T0078830.1 MGP_BALBcJ_G0030996.1 mouse_genomes_project 6 86843982 86845139 + Tpra1 protein_coding retained_intron MGP_BALBcJ_T0004960.1 MGP_BALBcJ_G0004256.1 mouse_genomes_project 6 70772416 70780889 + Gm44031 antisense antisense MGP_BALBcJ_T0001964.1 MGP_BALBcJ_G0001877.1 mouse_genomes_project 6 42386051 42386606 + TEC TEC MGP_BALBcJ_T0080850.1 MGP_BALBcJ_G0031440.1 mouse_genomes_project 6 140866429 140967187 - MGP_BALBcJ_P0080850 Slco1a6 protein_coding protein_coding MGP_BALBcJ_T0080851.1 MGP_BALBcJ_G0031440.1 mouse_genomes_project 6 140902358 140967183 - Slco1a6 protein_coding retained_intron MGP_BALBcJ_T0080852.1 MGP_BALBcJ_G0031440.1 mouse_genomes_project 6 140947108 140991761 - MGP_BALBcJ_P0080852 Slco1a6 protein_coding protein_coding MGP_BALBcJ_T0015241.1 MGP_BALBcJ_G0013338.1 mouse_genomes_project 6 15536652 15536916 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076840.1 MGP_BALBcJ_G0030534.1 mouse_genomes_project 6 28953595 29400654 - MGP_BALBcJ_P0076840 Plxna4 protein_coding protein_coding MGP_BALBcJ_T0076841.1 MGP_BALBcJ_G0030534.1 mouse_genomes_project 6 29033613 29035040 - Plxna4 protein_coding retained_intron MGP_BALBcJ_T0005101.1 MGP_BALBcJ_G0004355.1 mouse_genomes_project 6 143847622 143851149 + Gm15687 antisense antisense MGP_BALBcJ_T0080553.1 MGP_BALBcJ_G0031370.1 mouse_genomes_project 6 131178804 131179755 + MGP_BALBcJ_P0080553 Tas2r109 protein_coding protein_coding MGP_BALBcJ_T0008672.1 MGP_BALBcJ_G0007006.1 mouse_genomes_project 6 99830211 99858604 + Gm9871 lincRNA lincRNA MGP_BALBcJ_T0008673.1 MGP_BALBcJ_G0007006.1 mouse_genomes_project 6 99839155 99858437 + Gm9871 lincRNA lincRNA MGP_BALBcJ_T0008674.1 MGP_BALBcJ_G0007006.1 mouse_genomes_project 6 99852844 99858232 + Gm9871 lincRNA lincRNA MGP_BALBcJ_T0008575.1 MGP_BALBcJ_G0006931.1 mouse_genomes_project 6 48556794 48569862 - Gm26677 lincRNA lincRNA MGP_BALBcJ_T0011628.1 MGP_BALBcJ_G0009753.1 mouse_genomes_project 6 49444794 49444998 + Gm27454 misc_RNA misc_RNA MGP_BALBcJ_T0076226.1 MGP_BALBcJ_G0030417.1 mouse_genomes_project 6 2116533 2167379 + MGP_BALBcJ_P0076226 Asb4 protein_coding protein_coding MGP_BALBcJ_T0076227.1 MGP_BALBcJ_G0030417.1 mouse_genomes_project 6 2123532 2135339 + MGP_BALBcJ_P0076227 Asb4 protein_coding protein_coding MGP_BALBcJ_T0079880.1 MGP_BALBcJ_G0031200.1 mouse_genomes_project 6 119778473 119836521 + MGP_BALBcJ_P0079880 Mug1 protein_coding protein_coding MGP_BALBcJ_T0079881.1 MGP_BALBcJ_G0031200.1 mouse_genomes_project 6 119778510 119828456 + Mug1 protein_coding retained_intron MGP_BALBcJ_T0079882.1 MGP_BALBcJ_G0031200.1 mouse_genomes_project 6 119780112 119782419 + Mug1 protein_coding retained_intron MGP_BALBcJ_T0079883.1 MGP_BALBcJ_G0031200.1 mouse_genomes_project 6 119781828 119791415 + Mug1 protein_coding retained_intron MGP_BALBcJ_T0079884.1 MGP_BALBcJ_G0031200.1 mouse_genomes_project 6 119833421 119836448 + Mug1 protein_coding retained_intron MGP_BALBcJ_T0102636.1 MGP_BALBcJ_G0040452.1 mouse_genomes_project 6 87764932 87765917 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002552.1 MGP_BALBcJ_G0002455.1 mouse_genomes_project 6 38506607 38506658 + MGP_BALBcJ_P0002552 Trbj2-2 TR_J_gene TR_J_gene MGP_BALBcJ_T0079936.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120782483 120798750 - MGP_BALBcJ_P0079936 Slc2a3 protein_coding protein_coding MGP_BALBcJ_T0079937.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120782500 120798527 - Slc2a3 protein_coding retained_intron MGP_BALBcJ_T0079938.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120784605 120798395 - MGP_BALBcJ_P0079938 Slc2a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079939.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120786922 120789186 - Slc2a3 protein_coding retained_intron MGP_BALBcJ_T0079940.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120793094 120859142 - MGP_BALBcJ_P0079940 Slc2a3 protein_coding protein_coding MGP_BALBcJ_T0079941.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120793287 120839130 - MGP_BALBcJ_P0079941 Slc2a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079942.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120795842 120798267 - MGP_BALBcJ_P0079942 Slc2a3 protein_coding protein_coding MGP_BALBcJ_T0079943.1 MGP_BALBcJ_G0031211.1 mouse_genomes_project 6 120795901 120798925 - MGP_BALBcJ_P0079943 Slc2a3 protein_coding protein_coding MGP_BALBcJ_T0001941.1 MGP_BALBcJ_G0001854.1 mouse_genomes_project 6 27948215 27950507 - TEC TEC MGP_BALBcJ_T0077582.1 MGP_BALBcJ_G0030726.1 mouse_genomes_project 6 49402843 49405242 - MGP_BALBcJ_P0077582 Hoxa6 protein_coding protein_coding MGP_BALBcJ_T0000280.1 MGP_BALBcJ_G0000221.1 mouse_genomes_project 6 65770864 65771628 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0080052.1 MGP_BALBcJ_G0031243.1 mouse_genomes_project 6 122833440 122847210 - MGP_BALBcJ_P0080052 protein_coding protein_coding MGP_BALBcJ_T0080053.1 MGP_BALBcJ_G0031243.1 mouse_genomes_project 6 122836068 122836522 - protein_coding processed_transcript MGP_BALBcJ_T0080054.1 MGP_BALBcJ_G0031243.1 mouse_genomes_project 6 122838615 122846951 - MGP_BALBcJ_P0080054 protein_coding protein_coding MGP_BALBcJ_T0078431.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81841453 82053527 + MGP_BALBcJ_P0078431 Dysf protein_coding protein_coding MGP_BALBcJ_T0078432.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81841565 82053363 + MGP_BALBcJ_P0078432 Dysf protein_coding protein_coding MGP_BALBcJ_T0078433.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81841565 82053363 + MGP_BALBcJ_P0078433 Dysf protein_coding protein_coding MGP_BALBcJ_T0078434.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81841565 82053363 + MGP_BALBcJ_P0078434 Dysf protein_coding protein_coding MGP_BALBcJ_T0078435.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81841630 82053363 + MGP_BALBcJ_P0078435 Dysf protein_coding protein_coding MGP_BALBcJ_T0078436.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81841778 82053526 + MGP_BALBcJ_P0078436 Dysf protein_coding protein_coding MGP_BALBcJ_T0078437.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81851934 82053324 + MGP_BALBcJ_P0078437 Dysf protein_coding protein_coding MGP_BALBcJ_T0078438.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81851934 82053324 + MGP_BALBcJ_P0078438 Dysf protein_coding protein_coding MGP_BALBcJ_T0078439.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81851934 82053324 + MGP_BALBcJ_P0078439 Dysf protein_coding protein_coding MGP_BALBcJ_T0078440.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81851934 82053526 + MGP_BALBcJ_P0078440 Dysf protein_coding protein_coding MGP_BALBcJ_T0078441.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81851935 82053527 + MGP_BALBcJ_P0078441 Dysf protein_coding protein_coding MGP_BALBcJ_T0078442.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81851938 82053526 + MGP_BALBcJ_P0078442 Dysf protein_coding protein_coding MGP_BALBcJ_T0078443.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81947075 81954256 + Dysf protein_coding processed_transcript MGP_BALBcJ_T0078444.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81948253 81958936 + Dysf protein_coding retained_intron MGP_BALBcJ_T0078445.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 81989238 81994906 + Dysf protein_coding processed_transcript MGP_BALBcJ_T0078446.1 MGP_BALBcJ_G0030923.1 mouse_genomes_project 6 82052950 82053508 + Dysf protein_coding processed_transcript MGP_BALBcJ_T0081057.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145657438 145797246 + MGP_BALBcJ_P0081057 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0081058.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145657460 145742651 + MGP_BALBcJ_P0081058 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0081059.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145657540 145797246 + MGP_BALBcJ_P0081059 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0081062.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145741069 145757640 + MGP_BALBcJ_P0081062 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0081063.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145757684 145771129 + MGP_BALBcJ_P0081063 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0081064.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145761592 145767369 + Ppfibp1 protein_coding processed_transcript MGP_BALBcJ_T0081065.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145764678 145797244 + Ppfibp1 protein_coding retained_intron MGP_BALBcJ_T0081066.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145765440 145782658 + Ppfibp1 protein_coding retained_intron MGP_BALBcJ_T0081067.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145766813 145771157 + Ppfibp1 protein_coding retained_intron MGP_BALBcJ_T0081068.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145767362 145784391 + MGP_BALBcJ_P0081068 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0081069.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145770230 145771487 + Ppfibp1 protein_coding retained_intron MGP_BALBcJ_T0081070.1 MGP_BALBcJ_G0031476.1 mouse_genomes_project 6 145776091 145784799 + MGP_BALBcJ_P0081070 Ppfibp1 protein_coding protein_coding MGP_BALBcJ_T0077353.1 MGP_BALBcJ_G0030672.1 mouse_genomes_project 6 45168151 45192310 - MGP_BALBcJ_P0077353 Zfp746 protein_coding protein_coding MGP_BALBcJ_T0077354.1 MGP_BALBcJ_G0030672.1 mouse_genomes_project 6 45168151 45192310 - MGP_BALBcJ_P0077354 Zfp746 protein_coding protein_coding MGP_BALBcJ_T0077355.1 MGP_BALBcJ_G0030672.1 mouse_genomes_project 6 45170507 45173118 - MGP_BALBcJ_P0077355 Zfp746 protein_coding protein_coding MGP_BALBcJ_T0077356.1 MGP_BALBcJ_G0030672.1 mouse_genomes_project 6 45171967 45187995 - Zfp746 protein_coding retained_intron MGP_BALBcJ_T0077357.1 MGP_BALBcJ_G0030672.1 mouse_genomes_project 6 45187338 45190927 - Zfp746 protein_coding retained_intron MGP_BALBcJ_T0077358.1 MGP_BALBcJ_G0030672.1 mouse_genomes_project 6 45190952 45192263 - Zfp746 protein_coding retained_intron MGP_BALBcJ_T0001998.1 MGP_BALBcJ_G0001911.1 mouse_genomes_project 6 69020840 69023695 + TEC TEC MGP_BALBcJ_T0076965.1 MGP_BALBcJ_G0030554.1 mouse_genomes_project 6 32197827 32211203 - MGP_BALBcJ_P0076965 Fam180a protein_coding protein_coding MGP_BALBcJ_T0015343.1 MGP_BALBcJ_G0013440.1 mouse_genomes_project 6 56581793 56581997 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004961.1 MGP_BALBcJ_G0004257.1 mouse_genomes_project 6 77718878 77812582 - Gm4409 antisense antisense MGP_BALBcJ_T0002155.1 MGP_BALBcJ_G0002067.1 mouse_genomes_project 6 133275709 133276399 + TEC TEC MGP_BALBcJ_T0098629.1 MGP_BALBcJ_G0036683.1 mouse_genomes_project 6 85203138 85203250 + n-R5s164 rRNA rRNA MGP_BALBcJ_T0015532.1 MGP_BALBcJ_G0013629.1 mouse_genomes_project 6 114844363 114844793 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002045.1 MGP_BALBcJ_G0001958.1 mouse_genomes_project 6 84508568 84510538 + TEC TEC MGP_BALBcJ_T0076157.1 MGP_BALBcJ_G0030404.1 mouse_genomes_project 6 401569 476607 - MGP_BALBcJ_P0076157 Calcr protein_coding protein_coding MGP_BALBcJ_T0076158.1 MGP_BALBcJ_G0030404.1 mouse_genomes_project 6 401609 477691 - MGP_BALBcJ_P0076158 Calcr protein_coding protein_coding MGP_BALBcJ_T0076159.1 MGP_BALBcJ_G0030404.1 mouse_genomes_project 6 401622 477635 - MGP_BALBcJ_P0076159 Calcr protein_coding protein_coding MGP_BALBcJ_T0076160.1 MGP_BALBcJ_G0030404.1 mouse_genomes_project 6 402711 465954 - MGP_BALBcJ_P0076160 Calcr protein_coding protein_coding MGP_BALBcJ_T0076161.1 MGP_BALBcJ_G0030404.1 mouse_genomes_project 6 402711 465954 - MGP_BALBcJ_P0076161 Calcr protein_coding protein_coding MGP_BALBcJ_T0015625.1 MGP_BALBcJ_G0013722.1 mouse_genomes_project 6 133485370 133485779 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077697.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52326843 52369554 - MGP_BALBcJ_P0077697 Crhr2 protein_coding protein_coding MGP_BALBcJ_T0077698.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52327979 52354779 - MGP_BALBcJ_P0077698 Crhr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077699.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52328006 52354707 - MGP_BALBcJ_P0077699 Crhr2 protein_coding protein_coding MGP_BALBcJ_T0077700.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52328071 52354565 - MGP_BALBcJ_P0077700 Crhr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0077701.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52328811 52369381 - MGP_BALBcJ_P0077701 Crhr2 protein_coding protein_coding MGP_BALBcJ_T0077702.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52329749 52337360 - Crhr2 protein_coding retained_intron MGP_BALBcJ_T0077703.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52335413 52369556 - Crhr2 protein_coding retained_intron MGP_BALBcJ_T0077704.1 MGP_BALBcJ_G0030750.1 mouse_genomes_project 6 52341536 52354565 - Crhr2 protein_coding retained_intron MGP_BALBcJ_T0015354.1 MGP_BALBcJ_G0013451.1 mouse_genomes_project 6 60661404 60662095 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076243.1 MGP_BALBcJ_G0030421.1 mouse_genomes_project 6 3281239 3303013 - MGP_BALBcJ_P0076243 Shfm1 protein_coding protein_coding MGP_BALBcJ_T0076244.1 MGP_BALBcJ_G0030421.1 mouse_genomes_project 6 3300797 3303018 - Shfm1 protein_coding retained_intron MGP_BALBcJ_T0010770.1 MGP_BALBcJ_G0008895.1 mouse_genomes_project 6 88667820 88667965 - Gm24816 miRNA miRNA MGP_BALBcJ_T0015641.1 MGP_BALBcJ_G0013738.1 mouse_genomes_project 6 139940724 139941254 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077031.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467458 35532643 + MGP_BALBcJ_P0077031 Luc7l2 protein_coding protein_coding MGP_BALBcJ_T0077032.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467589 35533847 + MGP_BALBcJ_P0077032 Luc7l2 protein_coding protein_coding MGP_BALBcJ_T0077033.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467589 35537511 + MGP_BALBcJ_P0077033 Luc7l2 protein_coding protein_coding MGP_BALBcJ_T0077034.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467639 35537509 + MGP_BALBcJ_P0077034 Luc7l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077035.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467656 35474141 + Luc7l2 protein_coding processed_transcript MGP_BALBcJ_T0077036.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467656 35474272 + Luc7l2 protein_coding retained_intron MGP_BALBcJ_T0077037.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35467656 35470230 + Luc7l2 protein_coding processed_transcript MGP_BALBcJ_T0077038.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35468023 35537468 + MGP_BALBcJ_P0077038 Luc7l2 protein_coding protein_coding MGP_BALBcJ_T0077039.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35468063 35510772 + Luc7l2 protein_coding processed_transcript MGP_BALBcJ_T0077040.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35471945 35516899 + MGP_BALBcJ_P0077040 Luc7l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077041.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35473863 35536997 + MGP_BALBcJ_P0077041 Luc7l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077042.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35475437 35494985 + Luc7l2 protein_coding retained_intron MGP_BALBcJ_T0077043.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35495521 35533629 + Luc7l2 protein_coding retained_intron MGP_BALBcJ_T0077044.1 MGP_BALBcJ_G0030571.1 mouse_genomes_project 6 35496219 35531078 + MGP_BALBcJ_P0077044 Luc7l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0002551.1 MGP_BALBcJ_G0002454.1 mouse_genomes_project 6 38506404 38506454 + MGP_BALBcJ_P0002551 Trbj2-1 TR_J_gene TR_J_gene MGP_BALBcJ_T0015302.1 MGP_BALBcJ_G0013399.1 mouse_genomes_project 6 44920987 44921628 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001953.1 MGP_BALBcJ_G0001866.1 mouse_genomes_project 6 38667326 38670873 - TEC TEC MGP_BALBcJ_T0078184.1 MGP_BALBcJ_G0030874.1 mouse_genomes_project 6 76194281 76197402 + MGP_BALBcJ_P0078184 Reg3a protein_coding protein_coding MGP_BALBcJ_T0015235.1 MGP_BALBcJ_G0013332.1 mouse_genomes_project 6 12946291 12946538 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015202.1 MGP_BALBcJ_G0013299.1 mouse_genomes_project 6 968898 969145 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004956.1 MGP_BALBcJ_G0004254.1 mouse_genomes_project 6 70385136 70392321 + Gm15401 antisense antisense MGP_BALBcJ_T0004957.1 MGP_BALBcJ_G0004254.1 mouse_genomes_project 6 70385685 70393204 + Gm15401 antisense antisense MGP_BALBcJ_T0004958.1 MGP_BALBcJ_G0004254.1 mouse_genomes_project 6 70392090 70393555 + Gm15401 antisense antisense MGP_BALBcJ_T0080210.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123251219 123252502 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080211.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123251219 123275256 - MGP_BALBcJ_P0080211 Ncapd2 protein_coding protein_coding MGP_BALBcJ_T0080212.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123253056 123254317 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080213.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123254167 123255033 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080214.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123254278 123257142 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080215.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123255058 123257124 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080216.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123256588 123257763 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080217.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123256683 123260363 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080218.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123259476 123261015 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080219.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123260838 123263070 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080220.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123267855 123275158 - MGP_BALBcJ_P0080220 Ncapd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080221.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123268079 123270155 - Ncapd2 protein_coding retained_intron MGP_BALBcJ_T0080222.1 MGP_BALBcJ_G0031267.1 mouse_genomes_project 6 123269352 123275045 - MGP_BALBcJ_P0080222 Ncapd2 protein_coding protein_coding MGP_BALBcJ_T0076883.1 MGP_BALBcJ_G0030542.1 mouse_genomes_project 6 31290473 31303525 + MGP_BALBcJ_P0076883 Akr1b7 protein_coding protein_coding MGP_BALBcJ_T0005006.1 MGP_BALBcJ_G0004281.1 mouse_genomes_project 6 86647740 86657179 - Gm26588 antisense antisense MGP_BALBcJ_T0005007.1 MGP_BALBcJ_G0004281.1 mouse_genomes_project 6 86650559 86655820 - Gm26588 antisense antisense MGP_BALBcJ_T0001960.1 MGP_BALBcJ_G0001873.1 mouse_genomes_project 6 42293169 42296108 + TEC TEC MGP_BALBcJ_T0080495.1 MGP_BALBcJ_G0031336.1 mouse_genomes_project 6 127910954 127930455 - MGP_BALBcJ_P0080495 Klri1 protein_coding protein_coding MGP_BALBcJ_T0077985.1 MGP_BALBcJ_G0030838.1 mouse_genomes_project 6 69116949 69121178 + Cd8a protein_coding retained_intron MGP_BALBcJ_T0077986.1 MGP_BALBcJ_G0030838.1 mouse_genomes_project 6 69116954 69120482 + MGP_BALBcJ_P0077986 Cd8a protein_coding protein_coding MGP_BALBcJ_T0002110.1 MGP_BALBcJ_G0002023.1 mouse_genomes_project 6 106470333 106472560 - TEC TEC MGP_BALBcJ_T0015411.1 MGP_BALBcJ_G0013508.1 mouse_genomes_project 6 69618726 69619520 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002555.1 MGP_BALBcJ_G0002458.1 mouse_genomes_project 6 38507103 38507152 + MGP_BALBcJ_P0002555 Trbj2-5 TR_J_gene TR_J_gene MGP_BALBcJ_T0080443.1 MGP_BALBcJ_G0031321.1 mouse_genomes_project 6 127543156 127552792 - MGP_BALBcJ_P0080443 4922502D21Rik protein_coding protein_coding MGP_BALBcJ_T0080444.1 MGP_BALBcJ_G0031321.1 mouse_genomes_project 6 127543839 127547689 - MGP_BALBcJ_P0080444 4922502D21Rik protein_coding protein_coding MGP_BALBcJ_T0015468.1 MGP_BALBcJ_G0013565.1 mouse_genomes_project 6 92379908 92380672 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002109.1 MGP_BALBcJ_G0002022.1 mouse_genomes_project 6 101669894 101671361 + TEC TEC MGP_BALBcJ_T0015657.1 MGP_BALBcJ_G0013754.1 mouse_genomes_project 6 147798010 147798333 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015563.1 MGP_BALBcJ_G0013660.1 mouse_genomes_project 6 121913811 121914661 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002488.1 MGP_BALBcJ_G0002395.1 mouse_genomes_project 6 38505813 38505827 + MGP_BALBcJ_P0002488 Trbd2 TR_D_gene TR_D_gene MGP_BALBcJ_T0015455.1 MGP_BALBcJ_G0013552.1 mouse_genomes_project 6 85281954 85282269 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011637.1 MGP_BALBcJ_G0009762.1 mouse_genomes_project 6 81530219 81530685 + Gm27631 misc_RNA misc_RNA MGP_BALBcJ_T0079693.1 MGP_BALBcJ_G0031170.1 mouse_genomes_project 6 117069911 117111326 + MGP_BALBcJ_P0079693 Dcp1b protein_coding protein_coding MGP_BALBcJ_T0079694.1 MGP_BALBcJ_G0031170.1 mouse_genomes_project 6 117069946 117109893 + MGP_BALBcJ_P0079694 Dcp1b protein_coding protein_coding MGP_BALBcJ_T0079695.1 MGP_BALBcJ_G0031170.1 mouse_genomes_project 6 117087405 117109914 + Dcp1b protein_coding retained_intron MGP_BALBcJ_T0079696.1 MGP_BALBcJ_G0031170.1 mouse_genomes_project 6 117095510 117104563 + Dcp1b protein_coding retained_intron MGP_BALBcJ_T0079697.1 MGP_BALBcJ_G0031170.1 mouse_genomes_project 6 117107251 117111324 + Dcp1b protein_coding retained_intron MGP_BALBcJ_T0102614.1 MGP_BALBcJ_G0040430.1 mouse_genomes_project 6 54590300 54591189 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010795.1 MGP_BALBcJ_G0008920.1 mouse_genomes_project 6 123317978 123318107 - Mir8113 miRNA miRNA MGP_BALBcJ_T0078516.1 MGP_BALBcJ_G0030944.1 mouse_genomes_project 6 83730778 83769006 - MGP_BALBcJ_P0078516 Nat8f4 protein_coding protein_coding MGP_BALBcJ_T0078517.1 MGP_BALBcJ_G0030944.1 mouse_genomes_project 6 83730778 83771340 - MGP_BALBcJ_P0078517 Nat8f4 protein_coding protein_coding MGP_BALBcJ_T0015443.1 MGP_BALBcJ_G0013540.1 mouse_genomes_project 6 82917394 82917918 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011602.1 MGP_BALBcJ_G0009727.1 mouse_genomes_project 6 7572534 7572626 + Gm27894 misc_RNA misc_RNA MGP_BALBcJ_T0077495.1 MGP_BALBcJ_G0030704.1 mouse_genomes_project 6 46473509 46495232 + MGP_BALBcJ_P0077495 Ccdc126 protein_coding protein_coding MGP_BALBcJ_T0077496.1 MGP_BALBcJ_G0030704.1 mouse_genomes_project 6 46473542 46495228 + MGP_BALBcJ_P0077496 Ccdc126 protein_coding protein_coding MGP_BALBcJ_T0101280.1 MGP_BALBcJ_G0039316.1 mouse_genomes_project 6 95839721 95839864 + Gm23703 snoRNA snoRNA MGP_BALBcJ_T0002133.1 MGP_BALBcJ_G0002045.1 mouse_genomes_project 6 122407971 122410432 - TEC TEC MGP_BALBcJ_T0008605.1 MGP_BALBcJ_G0006954.1 mouse_genomes_project 6 68908011 68909313 + Gm44427 lincRNA lincRNA MGP_BALBcJ_T0015574.1 MGP_BALBcJ_G0013671.1 mouse_genomes_project 6 125245831 125246351 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102606.1 MGP_BALBcJ_G0040422.1 mouse_genomes_project 6 39732043 39732107 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002097.1 MGP_BALBcJ_G0002010.1 mouse_genomes_project 6 98869195 98871324 + TEC TEC MGP_BALBcJ_T0077657.1 MGP_BALBcJ_G0030741.1 mouse_genomes_project 6 51642648 51717009 + MGP_BALBcJ_P0077657 Wipf3 protein_coding protein_coding MGP_BALBcJ_T0077658.1 MGP_BALBcJ_G0030741.1 mouse_genomes_project 6 51642648 51717009 + MGP_BALBcJ_P0077658 Wipf3 protein_coding protein_coding MGP_BALBcJ_T0077659.1 MGP_BALBcJ_G0030741.1 mouse_genomes_project 6 51665846 51717012 + MGP_BALBcJ_P0077659 Wipf3 protein_coding protein_coding MGP_BALBcJ_T0077660.1 MGP_BALBcJ_G0030741.1 mouse_genomes_project 6 51665846 51717012 + MGP_BALBcJ_P0077660 Wipf3 protein_coding protein_coding MGP_BALBcJ_T0077661.1 MGP_BALBcJ_G0030741.1 mouse_genomes_project 6 51685116 51698506 + Wipf3 protein_coding processed_transcript MGP_BALBcJ_T0077662.1 MGP_BALBcJ_G0030741.1 mouse_genomes_project 6 51701151 51704787 + Wipf3 protein_coding retained_intron MGP_BALBcJ_T0077245.1 MGP_BALBcJ_G0030634.1 mouse_genomes_project 6 39392459 39393552 + MGP_BALBcJ_P0077245 Tas2r135 protein_coding protein_coding MGP_BALBcJ_T0077399.1 MGP_BALBcJ_G0030679.1 mouse_genomes_project 6 45710341 45711465 + MGP_BALBcJ_P0077399 protein_coding protein_coding MGP_BALBcJ_T0077400.1 MGP_BALBcJ_G0030679.1 mouse_genomes_project 6 45710484 45711399 + protein_coding retained_intron MGP_BALBcJ_T0001911.1 MGP_BALBcJ_G0001824.1 mouse_genomes_project 6 1942082 1946571 - TEC TEC MGP_BALBcJ_T0080475.1 MGP_BALBcJ_G0031331.1 mouse_genomes_project 6 127815351 127822057 + MGP_BALBcJ_P0080475 Klrd1 protein_coding protein_coding MGP_BALBcJ_T0080476.1 MGP_BALBcJ_G0031331.1 mouse_genomes_project 6 127815351 127821755 + MGP_BALBcJ_P0080476 Klrd1 protein_coding protein_coding MGP_BALBcJ_T0080477.1 MGP_BALBcJ_G0031331.1 mouse_genomes_project 6 127815379 127822052 + MGP_BALBcJ_P0080477 Klrd1 protein_coding protein_coding MGP_BALBcJ_T0080478.1 MGP_BALBcJ_G0031331.1 mouse_genomes_project 6 127815394 127821899 + MGP_BALBcJ_P0080478 Klrd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080479.1 MGP_BALBcJ_G0031331.1 mouse_genomes_project 6 127818799 127821739 + MGP_BALBcJ_P0080479 Klrd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080480.1 MGP_BALBcJ_G0031331.1 mouse_genomes_project 6 127819852 127821738 + Klrd1 protein_coding retained_intron MGP_BALBcJ_T0015458.1 MGP_BALBcJ_G0013555.1 mouse_genomes_project 6 86816078 86816601 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078775.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86655788 86657360 + Mgll protein_coding processed_transcript MGP_BALBcJ_T0078776.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86655799 86756153 + MGP_BALBcJ_P0078776 Mgll protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078777.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86655812 86758805 + MGP_BALBcJ_P0078777 Mgll protein_coding protein_coding MGP_BALBcJ_T0078778.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86655914 86698212 + MGP_BALBcJ_P0078778 Mgll protein_coding protein_coding MGP_BALBcJ_T0078779.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86656395 86758689 + MGP_BALBcJ_P0078779 Mgll protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078780.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86656469 86761176 + MGP_BALBcJ_P0078780 Mgll protein_coding protein_coding MGP_BALBcJ_T0078781.1 MGP_BALBcJ_G0030992.1 mouse_genomes_project 6 86755899 86758648 + Mgll protein_coding retained_intron MGP_BALBcJ_T0102605.1 MGP_BALBcJ_G0040421.1 mouse_genomes_project 6 39707840 39708188 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0078515.1 MGP_BALBcJ_G0030943.1 mouse_genomes_project 6 83730777 83736461 - MGP_BALBcJ_P0078515 Nat8f2 protein_coding protein_coding MGP_BALBcJ_T0008710.1 MGP_BALBcJ_G0007040.1 mouse_genomes_project 6 125960850 125964484 - Gm42810 lincRNA lincRNA MGP_BALBcJ_T0078058.1 MGP_BALBcJ_G0030850.1 mouse_genomes_project 6 70055004 70064992 + MGP_BALBcJ_P0078058 Sftpb protein_coding protein_coding MGP_BALBcJ_T0078059.1 MGP_BALBcJ_G0030850.1 mouse_genomes_project 6 70055014 70064988 + MGP_BALBcJ_P0078059 Sftpb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078060.1 MGP_BALBcJ_G0030850.1 mouse_genomes_project 6 70055019 70063565 + MGP_BALBcJ_P0078060 Sftpb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078061.1 MGP_BALBcJ_G0030850.1 mouse_genomes_project 6 70055019 70063565 + MGP_BALBcJ_P0078061 Sftpb protein_coding protein_coding MGP_BALBcJ_T0078062.1 MGP_BALBcJ_G0030850.1 mouse_genomes_project 6 70057067 70064678 + Sftpb protein_coding retained_intron MGP_BALBcJ_T0101261.1 MGP_BALBcJ_G0039297.1 mouse_genomes_project 6 57497203 57497332 - Gm22723 snoRNA snoRNA MGP_BALBcJ_T0099997.1 MGP_BALBcJ_G0038033.1 mouse_genomes_project 6 35014098 35014202 + Gm23231 snRNA snRNA MGP_BALBcJ_T0008557.1 MGP_BALBcJ_G0006916.1 mouse_genomes_project 6 41129187 41132053 - Gm35216 lincRNA lincRNA MGP_BALBcJ_T0015402.1 MGP_BALBcJ_G0013499.1 mouse_genomes_project 6 66359423 66359904 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101742.1 MGP_BALBcJ_G0039707.1 mouse_genomes_project 6 62800440 62801510 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101743.1 MGP_BALBcJ_G0039707.1 mouse_genomes_project 6 62800560 62801278 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0076197.1 MGP_BALBcJ_G0030412.1 mouse_genomes_project 6 1468701 1482152 + MGP_BALBcJ_P0076197 protein_coding protein_coding MGP_BALBcJ_T0076198.1 MGP_BALBcJ_G0030412.1 mouse_genomes_project 6 1468701 1482154 + MGP_BALBcJ_P0076198 protein_coding protein_coding MGP_BALBcJ_T0076199.1 MGP_BALBcJ_G0030412.1 mouse_genomes_project 6 1468801 1482154 + MGP_BALBcJ_P0076199 protein_coding protein_coding MGP_BALBcJ_T0079089.1 MGP_BALBcJ_G0031059.1 mouse_genomes_project 6 96281090 96392282 - MGP_BALBcJ_P0079089 Gm765 protein_coding protein_coding MGP_BALBcJ_T0079090.1 MGP_BALBcJ_G0031059.1 mouse_genomes_project 6 96390989 96392187 - Gm765 protein_coding retained_intron MGP_BALBcJ_T0008478.1 MGP_BALBcJ_G0006865.1 mouse_genomes_project 6 3213128 3232771 + Gm20685 lincRNA lincRNA MGP_BALBcJ_T0008490.1 MGP_BALBcJ_G0006874.1 mouse_genomes_project 6 10528438 10711932 + lincRNA lincRNA MGP_BALBcJ_T0008491.1 MGP_BALBcJ_G0006874.1 mouse_genomes_project 6 10528481 10553670 + lincRNA lincRNA MGP_BALBcJ_T0098636.1 MGP_BALBcJ_G0036690.1 mouse_genomes_project 6 138957814 138957925 - Gm24174 rRNA rRNA MGP_BALBcJ_T0080537.1 MGP_BALBcJ_G0031355.1 mouse_genomes_project 6 130042914 130043946 - MGP_BALBcJ_P0080537 Tas2r107 protein_coding protein_coding MGP_BALBcJ_T0002666.1 MGP_BALBcJ_G0002550.1 mouse_genomes_project 6 38187921 38188375 + MGP_BALBcJ_P0002666 Trbv23 TR_V_gene TR_V_gene MGP_BALBcJ_T0002667.1 MGP_BALBcJ_G0002550.1 mouse_genomes_project 6 38187921 38188375 + MGP_BALBcJ_P0002667 Trbv23 TR_V_gene TR_V_gene MGP_BALBcJ_T0077423.1 MGP_BALBcJ_G0030687.1 mouse_genomes_project 6 45807428 45814258 + MGP_BALBcJ_P0077423 Gimap4 protein_coding protein_coding MGP_BALBcJ_T0077424.1 MGP_BALBcJ_G0030687.1 mouse_genomes_project 6 45807457 45814940 + MGP_BALBcJ_P0077424 Gimap4 protein_coding protein_coding MGP_BALBcJ_T0077425.1 MGP_BALBcJ_G0030687.1 mouse_genomes_project 6 45807457 45814940 + MGP_BALBcJ_P0077425 Gimap4 protein_coding protein_coding MGP_BALBcJ_T0077426.1 MGP_BALBcJ_G0030687.1 mouse_genomes_project 6 45807460 45814757 + MGP_BALBcJ_P0077426 Gimap4 protein_coding protein_coding MGP_BALBcJ_T0077427.1 MGP_BALBcJ_G0030687.1 mouse_genomes_project 6 45807460 45814937 + MGP_BALBcJ_P0077427 Gimap4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077428.1 MGP_BALBcJ_G0030687.1 mouse_genomes_project 6 45807461 45814942 + MGP_BALBcJ_P0077428 Gimap4 protein_coding protein_coding MGP_BALBcJ_T0079598.1 MGP_BALBcJ_G0031150.1 mouse_genomes_project 6 114448412 114449561 + MGP_BALBcJ_P0079598 protein_coding protein_coding MGP_BALBcJ_T0078670.1 MGP_BALBcJ_G0030969.1 mouse_genomes_project 6 85295961 85302102 + MGP_BALBcJ_P0078670 Gkn2 protein_coding protein_coding MGP_BALBcJ_T0078935.1 MGP_BALBcJ_G0031027.1 mouse_genomes_project 6 89467389 89482152 + MGP_BALBcJ_P0078935 Tmem43 protein_coding protein_coding MGP_BALBcJ_T0078936.1 MGP_BALBcJ_G0031027.1 mouse_genomes_project 6 89467413 89471322 + Tmem43 protein_coding retained_intron MGP_BALBcJ_T0078937.1 MGP_BALBcJ_G0031027.1 mouse_genomes_project 6 89467437 89468149 + Tmem43 protein_coding processed_transcript MGP_BALBcJ_T0078938.1 MGP_BALBcJ_G0031027.1 mouse_genomes_project 6 89467445 89472829 + Tmem43 protein_coding retained_intron MGP_BALBcJ_T0078939.1 MGP_BALBcJ_G0031027.1 mouse_genomes_project 6 89470288 89471946 + Tmem43 protein_coding processed_transcript MGP_BALBcJ_T0011648.1 MGP_BALBcJ_G0009773.1 mouse_genomes_project 6 120324857 120325106 - Gm27826 misc_RNA misc_RNA MGP_BALBcJ_T0077080.1 MGP_BALBcJ_G0030579.1 mouse_genomes_project 6 36328917 36337978 + MGP_BALBcJ_P0077080 Rab19 protein_coding protein_coding MGP_BALBcJ_T0001946.1 MGP_BALBcJ_G0001859.1 mouse_genomes_project 6 31731796 31733029 + TEC TEC MGP_BALBcJ_T0077782.1 MGP_BALBcJ_G0030779.1 mouse_genomes_project 6 54660746 54661833 - MGP_BALBcJ_P0077782 Vmn1r18 protein_coding protein_coding MGP_BALBcJ_T0001968.1 MGP_BALBcJ_G0001881.1 mouse_genomes_project 6 43115209 43117157 + TEC TEC MGP_BALBcJ_T0008583.1 MGP_BALBcJ_G0006936.1 mouse_genomes_project 6 49460981 49465818 + Hottip lincRNA lincRNA MGP_BALBcJ_T0008584.1 MGP_BALBcJ_G0006936.1 mouse_genomes_project 6 49460990 49465294 + Hottip lincRNA lincRNA MGP_BALBcJ_T0015229.1 MGP_BALBcJ_G0013326.1 mouse_genomes_project 6 10127337 10127834 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076809.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27568421 27702290 - MGP_BALBcJ_P0076809 Copg2 protein_coding protein_coding MGP_BALBcJ_T0076810.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27569279 27702345 - MGP_BALBcJ_P0076810 Copg2 protein_coding protein_coding MGP_BALBcJ_T0076811.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27629184 27702261 - Copg2 protein_coding processed_transcript MGP_BALBcJ_T0076812.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27629674 27702315 - Copg2 protein_coding processed_transcript MGP_BALBcJ_T0076813.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27664616 27702281 - Copg2 protein_coding processed_transcript MGP_BALBcJ_T0076814.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27664992 27701977 - Copg2 protein_coding processed_transcript MGP_BALBcJ_T0076815.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27700447 27701988 - Copg2 protein_coding processed_transcript MGP_BALBcJ_T0076816.1 MGP_BALBcJ_G0030528.1 mouse_genomes_project 6 27701665 27702299 - Copg2 protein_coding processed_transcript MGP_BALBcJ_T0079146.1 MGP_BALBcJ_G0031070.1 mouse_genomes_project 6 100233499 100237046 - Cntn3 protein_coding retained_intron MGP_BALBcJ_T0079147.1 MGP_BALBcJ_G0031070.1 mouse_genomes_project 6 100234148 100647255 - MGP_BALBcJ_P0079147 Cntn3 protein_coding protein_coding MGP_BALBcJ_T0079148.1 MGP_BALBcJ_G0031070.1 mouse_genomes_project 6 100234150 100537486 - MGP_BALBcJ_P0079148 Cntn3 protein_coding protein_coding MGP_BALBcJ_T0015605.1 MGP_BALBcJ_G0013702.1 mouse_genomes_project 6 129641609 129642346 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076821.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203442 28321556 + MGP_BALBcJ_P0076821 Mkln1 protein_coding protein_coding MGP_BALBcJ_T0076822.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203535 28275597 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076823.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203536 28240712 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076824.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203543 28224151 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076825.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203552 28209191 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076826.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203552 28235582 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076827.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28203566 28237826 + Mkln1 protein_coding processed_transcript MGP_BALBcJ_T0076828.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28235396 28294164 + Mkln1 protein_coding processed_transcript MGP_BALBcJ_T0076829.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28235430 28279089 + Mkln1 protein_coding processed_transcript MGP_BALBcJ_T0076830.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28272827 28297446 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076831.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28281575 28285187 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076832.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28294146 28312663 + MGP_BALBcJ_P0076832 Mkln1 protein_coding protein_coding MGP_BALBcJ_T0076833.1 MGP_BALBcJ_G0030531.1 mouse_genomes_project 6 28297373 28312542 + Mkln1 protein_coding retained_intron MGP_BALBcJ_T0076820.1 MGP_BALBcJ_G0030530.1 mouse_genomes_project 6 27759901 27762951 - MGP_BALBcJ_P0076820 Klf14 protein_coding protein_coding MGP_BALBcJ_T0002003.1 MGP_BALBcJ_G0001916.1 mouse_genomes_project 6 69552242 69553506 + TEC TEC MGP_BALBcJ_T0011615.1 MGP_BALBcJ_G0009740.1 mouse_genomes_project 6 27556394 27556493 + Gm27568 misc_RNA misc_RNA MGP_BALBcJ_T0015637.1 MGP_BALBcJ_G0013734.1 mouse_genomes_project 6 138919024 138919466 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078543.1 MGP_BALBcJ_G0030948.1 mouse_genomes_project 6 83913370 83917986 + Figla protein_coding processed_transcript MGP_BALBcJ_T0078544.1 MGP_BALBcJ_G0030948.1 mouse_genomes_project 6 83914390 83918196 + MGP_BALBcJ_P0078544 Figla protein_coding protein_coding MGP_BALBcJ_T0002156.1 MGP_BALBcJ_G0002068.1 mouse_genomes_project 6 133976778 133977025 - TEC TEC MGP_BALBcJ_T0008612.1 MGP_BALBcJ_G0006961.1 mouse_genomes_project 6 69909914 69914773 + Gm45050 lincRNA lincRNA MGP_BALBcJ_T0100010.1 MGP_BALBcJ_G0038046.1 mouse_genomes_project 6 68780228 68780383 - Gm23485 snRNA snRNA MGP_BALBcJ_T0000283.1 MGP_BALBcJ_G0000224.1 mouse_genomes_project 6 65900505 65901160 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0101235.1 MGP_BALBcJ_G0039271.1 mouse_genomes_project 6 4598355 4598484 + Gm22276 snoRNA snoRNA MGP_BALBcJ_T0078394.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81628358 81635938 + MGP_BALBcJ_P0078394 Nagk protein_coding protein_coding MGP_BALBcJ_T0078395.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81628404 81635936 + MGP_BALBcJ_P0078395 Nagk protein_coding protein_coding MGP_BALBcJ_T0078396.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81628537 81631992 + Nagk protein_coding retained_intron MGP_BALBcJ_T0078397.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81628584 81635716 + Nagk protein_coding processed_transcript MGP_BALBcJ_T0078398.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81628611 81636802 + MGP_BALBcJ_P0078398 Nagk protein_coding protein_coding MGP_BALBcJ_T0078399.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81629618 81630370 + Nagk protein_coding retained_intron MGP_BALBcJ_T0078400.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81630402 81633649 + Nagk protein_coding retained_intron MGP_BALBcJ_T0078401.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81631320 81632736 + Nagk protein_coding retained_intron MGP_BALBcJ_T0078402.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81631353 81634513 + Nagk protein_coding processed_transcript MGP_BALBcJ_T0078403.1 MGP_BALBcJ_G0030920.1 mouse_genomes_project 6 81635529 81637400 + Nagk protein_coding retained_intron MGP_BALBcJ_T0079138.1 MGP_BALBcJ_G0031067.1 mouse_genomes_project 6 98789866 98892478 + MGP_BALBcJ_P0079138 Gxylt2 protein_coding protein_coding MGP_BALBcJ_T0079139.1 MGP_BALBcJ_G0031067.1 mouse_genomes_project 6 98789887 98792807 + Gxylt2 protein_coding processed_transcript MGP_BALBcJ_T0011633.1 MGP_BALBcJ_G0009758.1 mouse_genomes_project 6 49464798 49464969 + Gm27866 misc_RNA misc_RNA MGP_BALBcJ_T0077914.1 MGP_BALBcJ_G0030815.1 mouse_genomes_project 6 64007963 64016664 - MGP_BALBcJ_P0077914 Vmn1r32 protein_coding protein_coding MGP_BALBcJ_T0015441.1 MGP_BALBcJ_G0013538.1 mouse_genomes_project 6 82650802 82651810 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004959.1 MGP_BALBcJ_G0004255.1 mouse_genomes_project 6 70455458 70461335 + Gm15402 antisense antisense MGP_BALBcJ_T0079749.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117825645 117828938 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079750.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117825645 117947537 - MGP_BALBcJ_P0079750 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079751.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117825647 117947520 - MGP_BALBcJ_P0079751 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079752.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117825647 117947520 - MGP_BALBcJ_P0079752 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079753.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117826297 117946524 - MGP_BALBcJ_P0079753 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079754.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117826297 117946524 - MGP_BALBcJ_P0079754 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079755.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117828255 117838127 - MGP_BALBcJ_P0079755 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079756.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117828801 117839327 - MGP_BALBcJ_P0079756 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079757.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117831509 117836007 - MGP_BALBcJ_P0079757 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079758.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117831509 117836006 - MGP_BALBcJ_P0079758 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079759.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117832446 117835514 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079760.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117839137 117849990 - MGP_BALBcJ_P0079760 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079761.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117839292 117849669 - MGP_BALBcJ_P0079761 Wnk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079762.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117839412 117841779 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079763.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117845892 117851718 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079764.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117851886 117853562 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079765.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117853214 117872043 - MGP_BALBcJ_P0079765 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079766.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117853221 117857734 - MGP_BALBcJ_P0079766 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079767.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117854432 117893546 - MGP_BALBcJ_P0079767 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079768.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117855213 117947472 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079769.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117855213 117893505 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0079770.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117857659 117864652 - MGP_BALBcJ_P0079770 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079771.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117864029 117865455 - MGP_BALBcJ_P0079771 Wnk1 protein_coding protein_coding MGP_BALBcJ_T0079772.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117872933 117895908 - Wnk1 protein_coding processed_transcript MGP_BALBcJ_T0079773.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117872944 117884831 - Wnk1 protein_coding processed_transcript MGP_BALBcJ_T0079774.1 MGP_BALBcJ_G0031178.1 mouse_genomes_project 6 117874126 117876446 - Wnk1 protein_coding retained_intron MGP_BALBcJ_T0077202.1 MGP_BALBcJ_G0030625.1 mouse_genomes_project 6 39176758 39177718 + MGP_BALBcJ_P0077202 Tas2r144 protein_coding protein_coding MGP_BALBcJ_T0077285.1 MGP_BALBcJ_G0030658.1 mouse_genomes_project 6 40301673 40303598 + MGP_BALBcJ_P0077285 Olfr47 protein_coding protein_coding MGP_BALBcJ_T0000130.1 MGP_BALBcJ_G0000099.1 mouse_genomes_project 6 65397778 65398076 + MGP_BALBcJ_P0000130 Igkv9-129 IG_V_gene IG_V_gene MGP_BALBcJ_T0000131.1 MGP_BALBcJ_G0000099.1 mouse_genomes_project 6 65397781 65398076 + MGP_BALBcJ_P0000131 Igkv9-129 IG_V_gene IG_V_gene MGP_BALBcJ_T0101302.1 MGP_BALBcJ_G0039338.1 mouse_genomes_project 6 142262262 142262391 - Gm23272 snoRNA snoRNA MGP_BALBcJ_T0098624.1 MGP_BALBcJ_G0036678.1 mouse_genomes_project 6 9423860 9423980 + n-R5s160 rRNA rRNA MGP_BALBcJ_T0015342.1 MGP_BALBcJ_G0013439.1 mouse_genomes_project 6 56425910 56428344 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080984.1 MGP_BALBcJ_G0031462.1 mouse_genomes_project 6 144168155 144418760 - MGP_BALBcJ_P0080984 Lmntd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080985.1 MGP_BALBcJ_G0031462.1 mouse_genomes_project 6 144193024 144242548 - MGP_BALBcJ_P0080985 Lmntd1 protein_coding protein_coding MGP_BALBcJ_T0080986.1 MGP_BALBcJ_G0031462.1 mouse_genomes_project 6 144238785 144242864 - MGP_BALBcJ_P0080986 Lmntd1 protein_coding protein_coding MGP_BALBcJ_T0080987.1 MGP_BALBcJ_G0031462.1 mouse_genomes_project 6 144346858 144418806 - Lmntd1 protein_coding processed_transcript MGP_BALBcJ_T0080988.1 MGP_BALBcJ_G0031462.1 mouse_genomes_project 6 144385049 144418456 - Lmntd1 protein_coding processed_transcript MGP_BALBcJ_T0015264.1 MGP_BALBcJ_G0013361.1 mouse_genomes_project 6 26780253 26780460 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076611.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25990846 26007705 - MGP_BALBcJ_P0076611 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076612.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25990849 26003671 - MGP_BALBcJ_P0076612 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076613.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25990849 26007738 - MGP_BALBcJ_P0076613 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076614.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25990849 26003623 - MGP_BALBcJ_P0076614 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076615.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25990850 26007716 - MGP_BALBcJ_P0076615 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076616.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25990857 25993831 - MGP_BALBcJ_P0076616 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076617.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25994972 25997369 - Impdh1 protein_coding retained_intron MGP_BALBcJ_T0076618.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25995517 26007651 - MGP_BALBcJ_P0076618 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0076619.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25998056 26000840 - Impdh1 protein_coding retained_intron MGP_BALBcJ_T0076620.1 MGP_BALBcJ_G0030499.1 mouse_genomes_project 6 25998222 26007303 - MGP_BALBcJ_P0076620 Impdh1 protein_coding protein_coding MGP_BALBcJ_T0002117.1 MGP_BALBcJ_G0002030.1 mouse_genomes_project 6 111702609 111705097 - TEC TEC MGP_BALBcJ_T0015444.1 MGP_BALBcJ_G0013541.1 mouse_genomes_project 6 82933417 82933961 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077251.1 MGP_BALBcJ_G0030639.1 mouse_genomes_project 6 39524746 39525700 - MGP_BALBcJ_P0077251 Olfr455 protein_coding protein_coding MGP_BALBcJ_T0078192.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804284 78613765 + MGP_BALBcJ_P0078192 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078193.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804295 77811182 + MGP_BALBcJ_P0078193 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078194.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804325 77814349 + MGP_BALBcJ_P0078194 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078195.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804325 78612943 + MGP_BALBcJ_P0078195 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078196.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804418 78613763 + MGP_BALBcJ_P0078196 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078197.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804455 77815335 + MGP_BALBcJ_P0078197 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078198.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77804750 77811349 + MGP_BALBcJ_P0078198 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0078199.1 MGP_BALBcJ_G0030879.1 mouse_genomes_project 6 77805065 77814357 + MGP_BALBcJ_P0078199 Lrrtm4 protein_coding protein_coding MGP_BALBcJ_T0080277.1 MGP_BALBcJ_G0031280.1 mouse_genomes_project 6 124614754 124617616 - MGP_BALBcJ_P0080277 Kcna5 protein_coding protein_coding MGP_BALBcJ_T0015494.1 MGP_BALBcJ_G0013591.1 mouse_genomes_project 6 101339047 101339484 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000161.1 MGP_BALBcJ_G0000122.1 mouse_genomes_project 6 66401226 66401773 - MGP_BALBcJ_P0000161 Igkv4-91 IG_V_gene IG_V_gene MGP_BALBcJ_T0076923.1 MGP_BALBcJ_G0030547.1 mouse_genomes_project 6 31744358 31750610 - MGP_BALBcJ_P0076923 3110062M04Rik protein_coding protein_coding MGP_BALBcJ_T0076924.1 MGP_BALBcJ_G0030547.1 mouse_genomes_project 6 31744427 31750649 - MGP_BALBcJ_P0076924 3110062M04Rik protein_coding protein_coding MGP_BALBcJ_T0076926.1 MGP_BALBcJ_G0030547.1 mouse_genomes_project 6 31746282 31750598 - MGP_BALBcJ_P0076926 3110062M04Rik protein_coding protein_coding MGP_BALBcJ_T0076927.1 MGP_BALBcJ_G0030547.1 mouse_genomes_project 6 31747233 31749718 - MGP_BALBcJ_P0076927 3110062M04Rik protein_coding protein_coding MGP_BALBcJ_T0076928.1 MGP_BALBcJ_G0030547.1 mouse_genomes_project 6 31747933 31749569 - 3110062M04Rik protein_coding retained_intron MGP_BALBcJ_T0004987.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84442767 84481702 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004988.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84442767 84468296 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004989.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84442791 84481702 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004990.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84443330 84499279 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004991.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84443839 84481702 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004992.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84443921 84481701 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004993.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84443994 84480760 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0004994.1 MGP_BALBcJ_G0004272.1 mouse_genomes_project 6 84465230 84499709 + 1600020E01Rik antisense antisense MGP_BALBcJ_T0002035.1 MGP_BALBcJ_G0001948.1 mouse_genomes_project 6 80794278 80795742 + TEC TEC MGP_BALBcJ_T0077064.1 MGP_BALBcJ_G0030577.1 mouse_genomes_project 6 36071610 36143250 - MGP_BALBcJ_P0077064 Kdm7a protein_coding protein_coding MGP_BALBcJ_T0077065.1 MGP_BALBcJ_G0030577.1 mouse_genomes_project 6 36077095 36089920 - Kdm7a protein_coding processed_transcript MGP_BALBcJ_T0010748.1 MGP_BALBcJ_G0008873.1 mouse_genomes_project 6 45546429 45546503 + Gm24325 miRNA miRNA MGP_BALBcJ_T0002079.1 MGP_BALBcJ_G0001992.1 mouse_genomes_project 6 89708227 89710062 + TEC TEC MGP_BALBcJ_T0015246.1 MGP_BALBcJ_G0013343.1 mouse_genomes_project 6 16528476 16528583 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015658.1 MGP_BALBcJ_G0013755.1 mouse_genomes_project 6 147829632 147830567 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015607.1 MGP_BALBcJ_G0013704.1 mouse_genomes_project 6 129995998 129996111 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079450.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112760565 112775490 - Vgll4 protein_coding processed_transcript MGP_BALBcJ_T0079451.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112761361 112821752 - MGP_BALBcJ_P0079451 Vgll4 protein_coding protein_coding MGP_BALBcJ_T0079452.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112762128 112775403 - Vgll4 protein_coding processed_transcript MGP_BALBcJ_T0079453.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112762128 112764695 - Vgll4 protein_coding processed_transcript MGP_BALBcJ_T0079454.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112762258 112869507 - MGP_BALBcJ_P0079454 Vgll4 protein_coding protein_coding MGP_BALBcJ_T0079455.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112762701 112870321 - MGP_BALBcJ_P0079455 Vgll4 protein_coding protein_coding MGP_BALBcJ_T0079456.1 MGP_BALBcJ_G0031123.1 mouse_genomes_project 6 112819984 112821747 - Vgll4 protein_coding retained_intron MGP_BALBcJ_T0077099.1 MGP_BALBcJ_G0030583.1 mouse_genomes_project 6 36539518 36550643 + MGP_BALBcJ_P0077099 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078930.1 MGP_BALBcJ_G0031025.1 mouse_genomes_project 6 89356853 89404142 - MGP_BALBcJ_P0078930 Wnt7a protein_coding protein_coding MGP_BALBcJ_T0078931.1 MGP_BALBcJ_G0031025.1 mouse_genomes_project 6 89356855 89357970 - Wnt7a protein_coding processed_transcript MGP_BALBcJ_T0078932.1 MGP_BALBcJ_G0031025.1 mouse_genomes_project 6 89356857 89357944 - Wnt7a protein_coding processed_transcript MGP_BALBcJ_T0015505.1 MGP_BALBcJ_G0013602.1 mouse_genomes_project 6 107109030 107109508 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002160.1 MGP_BALBcJ_G0002072.1 mouse_genomes_project 6 135936676 135937730 - TEC TEC MGP_BALBcJ_T0078651.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 84972069 85022219 + MGP_BALBcJ_P0078651 Gfpt1 protein_coding protein_coding MGP_BALBcJ_T0078652.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 84972069 84985077 + MGP_BALBcJ_P0078652 Gfpt1 protein_coding protein_coding MGP_BALBcJ_T0078653.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 84972073 84983635 + Gfpt1 protein_coding processed_transcript MGP_BALBcJ_T0078654.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 84972073 84975537 + Gfpt1 protein_coding retained_intron MGP_BALBcJ_T0078655.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 84972073 84985077 + MGP_BALBcJ_P0078655 Gfpt1 protein_coding protein_coding MGP_BALBcJ_T0078656.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 84972114 85018265 + MGP_BALBcJ_P0078656 Gfpt1 protein_coding protein_coding MGP_BALBcJ_T0078657.1 MGP_BALBcJ_G0030965.1 mouse_genomes_project 6 85006836 85016387 + Gfpt1 protein_coding retained_intron MGP_BALBcJ_T0077183.1 MGP_BALBcJ_G0030617.1 mouse_genomes_project 6 38661026 38678267 - MGP_BALBcJ_P0077183 Kel protein_coding protein_coding MGP_BALBcJ_T0077184.1 MGP_BALBcJ_G0030617.1 mouse_genomes_project 6 38661031 38662693 - MGP_BALBcJ_P0077184 Kel protein_coding protein_coding MGP_BALBcJ_T0077185.1 MGP_BALBcJ_G0030617.1 mouse_genomes_project 6 38661050 38662552 - Kel protein_coding processed_transcript MGP_BALBcJ_T0077186.1 MGP_BALBcJ_G0030617.1 mouse_genomes_project 6 38662719 38673096 - MGP_BALBcJ_P0077186 Kel protein_coding protein_coding MGP_BALBcJ_T0077187.1 MGP_BALBcJ_G0030617.1 mouse_genomes_project 6 38663134 38663660 - Kel protein_coding retained_intron MGP_BALBcJ_T0077269.1 MGP_BALBcJ_G0030647.1 mouse_genomes_project 6 39820732 39824625 + MGP_BALBcJ_P0077269 Olfr449 protein_coding protein_coding MGP_BALBcJ_T0077270.1 MGP_BALBcJ_G0030647.1 mouse_genomes_project 6 39820732 39824811 + MGP_BALBcJ_P0077270 Olfr449 protein_coding protein_coding MGP_BALBcJ_T0077271.1 MGP_BALBcJ_G0030647.1 mouse_genomes_project 6 39820780 39824291 + MGP_BALBcJ_P0077271 Olfr449 protein_coding protein_coding MGP_BALBcJ_T0077272.1 MGP_BALBcJ_G0030647.1 mouse_genomes_project 6 39824202 39825239 + MGP_BALBcJ_P0077272 Olfr449 protein_coding protein_coding MGP_BALBcJ_T0101256.1 MGP_BALBcJ_G0039292.1 mouse_genomes_project 6 53819122 53819254 - Gm24709 snoRNA snoRNA MGP_BALBcJ_T0002104.1 MGP_BALBcJ_G0002017.1 mouse_genomes_project 6 99615775 99617884 + TEC TEC MGP_BALBcJ_T0010739.1 MGP_BALBcJ_G0008864.1 mouse_genomes_project 6 27562166 27562264 + Mir335 miRNA miRNA MGP_BALBcJ_T0076525.1 MGP_BALBcJ_G0030476.1 mouse_genomes_project 6 21195015 21261731 - MGP_BALBcJ_P0076525 Iqub protein_coding protein_coding MGP_BALBcJ_T0015514.1 MGP_BALBcJ_G0013611.1 mouse_genomes_project 6 110582673 110584628 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002094.1 MGP_BALBcJ_G0002007.1 mouse_genomes_project 6 98329669 98332189 - TEC TEC MGP_BALBcJ_T0002673.1 MGP_BALBcJ_G0002554.1 mouse_genomes_project 6 38530622 38531303 - MGP_BALBcJ_P0002673 Trbv31 TR_V_gene TR_V_gene MGP_BALBcJ_T0002674.1 MGP_BALBcJ_G0002554.1 mouse_genomes_project 6 38530624 38531384 - MGP_BALBcJ_P0002674 Trbv31 TR_V_gene TR_V_gene MGP_BALBcJ_T0002111.1 MGP_BALBcJ_G0002024.1 mouse_genomes_project 6 106590562 106591736 - TEC TEC MGP_BALBcJ_T0015449.1 MGP_BALBcJ_G0013546.1 mouse_genomes_project 6 83391688 83392157 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080337.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126050761 126124538 - MGP_BALBcJ_P0080337 Tspan9 protein_coding protein_coding MGP_BALBcJ_T0080338.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126054622 126056213 - Tspan9 protein_coding retained_intron MGP_BALBcJ_T0080339.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126055157 126125042 - MGP_BALBcJ_P0080339 Tspan9 protein_coding protein_coding MGP_BALBcJ_T0080340.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126055826 126242462 - MGP_BALBcJ_P0080340 Tspan9 protein_coding protein_coding MGP_BALBcJ_T0080341.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126055832 126239644 - MGP_BALBcJ_P0080341 Tspan9 protein_coding protein_coding MGP_BALBcJ_T0080342.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126056476 126242455 - MGP_BALBcJ_P0080342 Tspan9 protein_coding protein_coding MGP_BALBcJ_T0080343.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126056561 126222466 - MGP_BALBcJ_P0080343 Tspan9 protein_coding protein_coding MGP_BALBcJ_T0080344.1 MGP_BALBcJ_G0031296.1 mouse_genomes_project 6 126179720 126242496 - Tspan9 protein_coding processed_transcript MGP_BALBcJ_T0098722.1 MGP_BALBcJ_G0036776.1 mouse_genomes_project 6 66982453 66982780 - Rprl1 ribozyme ribozyme MGP_BALBcJ_T0078051.1 MGP_BALBcJ_G0030848.1 mouse_genomes_project 6 69844596 69901637 + MGP_BALBcJ_P0078051 St3gal5 protein_coding protein_coding MGP_BALBcJ_T0078052.1 MGP_BALBcJ_G0030848.1 mouse_genomes_project 6 69844627 69901637 + MGP_BALBcJ_P0078052 St3gal5 protein_coding protein_coding MGP_BALBcJ_T0078053.1 MGP_BALBcJ_G0030848.1 mouse_genomes_project 6 69844761 69893322 + MGP_BALBcJ_P0078053 St3gal5 protein_coding protein_coding MGP_BALBcJ_T0078054.1 MGP_BALBcJ_G0030848.1 mouse_genomes_project 6 69862613 69888369 + MGP_BALBcJ_P0078054 St3gal5 protein_coding protein_coding MGP_BALBcJ_T0099005.1 MGP_BALBcJ_G0037048.1 mouse_genomes_project 6 136225603 136225904 + Gm44258 sense_intronic sense_intronic MGP_BALBcJ_T0078186.1 MGP_BALBcJ_G0030876.1 mouse_genomes_project 6 76228665 76234622 + MGP_BALBcJ_P0078186 Reg1 protein_coding protein_coding MGP_BALBcJ_T0078187.1 MGP_BALBcJ_G0030876.1 mouse_genomes_project 6 76228725 76234622 + MGP_BALBcJ_P0078187 Reg1 protein_coding protein_coding MGP_BALBcJ_T0078188.1 MGP_BALBcJ_G0030876.1 mouse_genomes_project 6 76231937 76234621 + MGP_BALBcJ_P0078188 Reg1 protein_coding protein_coding MGP_BALBcJ_T0078642.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84932536 84955021 + MGP_BALBcJ_P0078642 Nfu1 protein_coding protein_coding MGP_BALBcJ_T0078643.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933136 84939037 + Nfu1 protein_coding retained_intron MGP_BALBcJ_T0078644.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933136 84955014 + MGP_BALBcJ_P0078644 Nfu1 protein_coding protein_coding MGP_BALBcJ_T0078645.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933136 84955019 + MGP_BALBcJ_P0078645 Nfu1 protein_coding protein_coding MGP_BALBcJ_T0078646.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933180 84935689 + Nfu1 protein_coding retained_intron MGP_BALBcJ_T0078647.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933189 84936792 + Nfu1 protein_coding retained_intron MGP_BALBcJ_T0078648.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933189 84949428 + MGP_BALBcJ_P0078648 Nfu1 protein_coding protein_coding MGP_BALBcJ_T0078649.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84933303 84952099 + Nfu1 protein_coding processed_transcript MGP_BALBcJ_T0078650.1 MGP_BALBcJ_G0030964.1 mouse_genomes_project 6 84951552 84955021 + Nfu1 protein_coding retained_intron MGP_BALBcJ_T0008538.1 MGP_BALBcJ_G0006908.1 mouse_genomes_project 6 32134497 32148635 + 1810058I24Rik lincRNA lincRNA MGP_BALBcJ_T0008539.1 MGP_BALBcJ_G0006908.1 mouse_genomes_project 6 32134559 32143481 + 1810058I24Rik lincRNA lincRNA MGP_BALBcJ_T0008540.1 MGP_BALBcJ_G0006908.1 mouse_genomes_project 6 32134575 32143866 + 1810058I24Rik lincRNA lincRNA MGP_BALBcJ_T0102599.1 MGP_BALBcJ_G0040415.1 mouse_genomes_project 6 37757690 37829327 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101961.1 MGP_BALBcJ_G0039818.1 mouse_genomes_project 6 131659391 131662961 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101962.1 MGP_BALBcJ_G0039818.1 mouse_genomes_project 6 131659424 131661695 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0008558.1 MGP_BALBcJ_G0006917.1 mouse_genomes_project 6 44644915 44649958 + Gm26625 lincRNA lincRNA MGP_BALBcJ_T0076475.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18745077 19016381 + MGP_BALBcJ_P0076475 Cped1 protein_coding protein_coding MGP_BALBcJ_T0076476.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18745105 18768700 + Cped1 protein_coding processed_transcript MGP_BALBcJ_T0076477.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18745105 18884227 + MGP_BALBcJ_P0076477 Cped1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076478.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18745757 18883254 + MGP_BALBcJ_P0076478 Cped1 protein_coding protein_coding MGP_BALBcJ_T0076479.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18746053 18830072 + Cped1 protein_coding processed_transcript MGP_BALBcJ_T0076480.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18776275 18999600 + MGP_BALBcJ_P0076480 Cped1 protein_coding protein_coding MGP_BALBcJ_T0076481.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18785516 18846836 + Cped1 protein_coding processed_transcript MGP_BALBcJ_T0076482.1 MGP_BALBcJ_G0030464.1 mouse_genomes_project 6 18888940 18902357 + Cped1 protein_coding retained_intron MGP_BALBcJ_T0098626.1 MGP_BALBcJ_G0036680.1 mouse_genomes_project 6 27164339 27164435 - Gm25625 rRNA rRNA MGP_BALBcJ_T0076781.1 MGP_BALBcJ_G0030523.1 mouse_genomes_project 6 27387958 27412312 + MGP_BALBcJ_P0076781 Cpa4 protein_coding protein_coding MGP_BALBcJ_T0078381.1 MGP_BALBcJ_G0030916.1 mouse_genomes_project 6 81538978 81566131 + MGP_BALBcJ_P0078381 Vax2 protein_coding protein_coding MGP_BALBcJ_T0079332.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111438312 111442293 - MGP_BALBcJ_P0079332 Rpusd3 protein_coding protein_coding MGP_BALBcJ_T0079333.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111438522 111439427 - Rpusd3 protein_coding retained_intron MGP_BALBcJ_T0079334.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111439080 111442294 - MGP_BALBcJ_P0079334 Rpusd3 protein_coding protein_coding MGP_BALBcJ_T0079335.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111439284 111442285 - MGP_BALBcJ_P0079335 Rpusd3 protein_coding protein_coding MGP_BALBcJ_T0079336.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111439763 111442294 - Rpusd3 protein_coding retained_intron MGP_BALBcJ_T0079337.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111439868 111442289 - MGP_BALBcJ_P0079337 Rpusd3 protein_coding protein_coding MGP_BALBcJ_T0079338.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111440170 111442023 - Rpusd3 protein_coding retained_intron MGP_BALBcJ_T0079339.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111440197 111442306 - MGP_BALBcJ_P0079339 Rpusd3 protein_coding protein_coding MGP_BALBcJ_T0079340.1 MGP_BALBcJ_G0031102.1 mouse_genomes_project 6 111441278 111442298 - Rpusd3 protein_coding retained_intron MGP_BALBcJ_T0015530.1 MGP_BALBcJ_G0013627.1 mouse_genomes_project 6 114384486 114385006 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101295.1 MGP_BALBcJ_G0039331.1 mouse_genomes_project 6 122328708 122328840 - Gm25311 snoRNA snoRNA MGP_BALBcJ_T0008664.1 MGP_BALBcJ_G0006999.1 mouse_genomes_project 6 97942088 97954534 - Gm43067 lincRNA lincRNA MGP_BALBcJ_T0005042.1 MGP_BALBcJ_G0004303.1 mouse_genomes_project 6 111740522 111741673 + Gm26982 antisense antisense MGP_BALBcJ_T0015474.1 MGP_BALBcJ_G0013571.1 mouse_genomes_project 6 93299432 93299783 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015221.1 MGP_BALBcJ_G0013318.1 mouse_genomes_project 6 6902346 6903409 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078151.1 MGP_BALBcJ_G0030867.1 mouse_genomes_project 6 70778236 70980235 - MGP_BALBcJ_P0078151 Dnah6 protein_coding protein_coding MGP_BALBcJ_T0078152.1 MGP_BALBcJ_G0030867.1 mouse_genomes_project 6 70778239 70980255 - MGP_BALBcJ_P0078152 Dnah6 protein_coding protein_coding MGP_BALBcJ_T0078153.1 MGP_BALBcJ_G0030867.1 mouse_genomes_project 6 70778372 70978380 - MGP_BALBcJ_P0078153 Dnah6 protein_coding protein_coding MGP_BALBcJ_T0078154.1 MGP_BALBcJ_G0030867.1 mouse_genomes_project 6 70844293 70893564 - Dnah6 protein_coding retained_intron MGP_BALBcJ_T0081012.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145306126 145311150 - MGP_BALBcJ_P0081012 Asun protein_coding protein_coding MGP_BALBcJ_T0081013.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145306126 145313839 - MGP_BALBcJ_P0081013 Asun protein_coding protein_coding MGP_BALBcJ_T0081014.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145306126 145340385 - MGP_BALBcJ_P0081014 Asun protein_coding protein_coding MGP_BALBcJ_T0081015.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145306135 145307874 - Asun protein_coding retained_intron MGP_BALBcJ_T0081016.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145306425 145306896 - Asun protein_coding retained_intron MGP_BALBcJ_T0081017.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145306588 145310550 - Asun protein_coding retained_intron MGP_BALBcJ_T0081018.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145309000 145312751 - Asun protein_coding processed_transcript MGP_BALBcJ_T0081019.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145310596 145311323 - Asun protein_coding retained_intron MGP_BALBcJ_T0081020.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145311514 145338811 - MGP_BALBcJ_P0081020 Asun protein_coding protein_coding MGP_BALBcJ_T0081021.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145319446 145322778 - Asun protein_coding retained_intron MGP_BALBcJ_T0081022.1 MGP_BALBcJ_G0031469.1 mouse_genomes_project 6 145335717 145340330 - Asun protein_coding retained_intron MGP_BALBcJ_T0015523.1 MGP_BALBcJ_G0013620.1 mouse_genomes_project 6 112200291 112200931 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099991.1 MGP_BALBcJ_G0038027.1 mouse_genomes_project 6 23236242 23236382 - Gm24691 snRNA snRNA MGP_BALBcJ_T0076385.1 MGP_BALBcJ_G0030450.1 mouse_genomes_project 6 14026473 14034403 + MGP_BALBcJ_P0076385 Cav2 protein_coding protein_coding MGP_BALBcJ_T0076386.1 MGP_BALBcJ_G0030450.1 mouse_genomes_project 6 14026615 14027973 + MGP_BALBcJ_P0076386 Cav2 protein_coding protein_coding MGP_BALBcJ_T0076387.1 MGP_BALBcJ_G0030450.1 mouse_genomes_project 6 14026647 14032727 + MGP_BALBcJ_P0076387 Cav2 protein_coding protein_coding MGP_BALBcJ_T0101753.1 MGP_BALBcJ_G0039713.1 mouse_genomes_project 6 144190491 144205005 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101754.1 MGP_BALBcJ_G0039713.1 mouse_genomes_project 6 144190492 144195138 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101755.1 MGP_BALBcJ_G0039713.1 mouse_genomes_project 6 144193205 144194947 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101756.1 MGP_BALBcJ_G0039713.1 mouse_genomes_project 6 144194323 144195064 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0002125.1 MGP_BALBcJ_G0002038.1 mouse_genomes_project 6 115034129 115034974 + TEC TEC MGP_BALBcJ_T0005085.1 MGP_BALBcJ_G0004342.1 mouse_genomes_project 6 134870342 134872830 + Gm26653 antisense antisense MGP_BALBcJ_T0102665.1 MGP_BALBcJ_G0040480.1 mouse_genomes_project 6 131436501 131437443 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015376.1 MGP_BALBcJ_G0013473.1 mouse_genomes_project 6 63858772 63858998 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015430.1 MGP_BALBcJ_G0013527.1 mouse_genomes_project 6 77344867 77345627 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000293.1 MGP_BALBcJ_G0000234.1 mouse_genomes_project 6 66395953 66396364 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008514.1 MGP_BALBcJ_G0006891.1 mouse_genomes_project 6 27895940 28021851 - Lncpint lincRNA lincRNA MGP_BALBcJ_T0008516.1 MGP_BALBcJ_G0006891.1 mouse_genomes_project 6 27968574 28021810 - Lncpint lincRNA lincRNA MGP_BALBcJ_T0008517.1 MGP_BALBcJ_G0006891.1 mouse_genomes_project 6 27969527 28021797 - Lncpint lincRNA lincRNA MGP_BALBcJ_T0008518.1 MGP_BALBcJ_G0006891.1 mouse_genomes_project 6 27969575 28021723 - Lncpint lincRNA lincRNA MGP_BALBcJ_T0000148.1 MGP_BALBcJ_G0000114.1 mouse_genomes_project 6 66104782 66105248 + MGP_BALBcJ_P0000148 Igkv14-100 IG_V_gene IG_V_gene MGP_BALBcJ_T0000149.1 MGP_BALBcJ_G0000114.1 mouse_genomes_project 6 66104782 66105248 + MGP_BALBcJ_P0000149 Igkv14-100 IG_V_gene IG_V_gene MGP_BALBcJ_T0015287.1 MGP_BALBcJ_G0013384.1 mouse_genomes_project 6 38465298 38465745 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077921.1 MGP_BALBcJ_G0030822.1 mouse_genomes_project 6 64275271 64276503 - MGP_BALBcJ_P0077921 Vmn1r39 protein_coding protein_coding MGP_BALBcJ_T0001947.1 MGP_BALBcJ_G0001860.1 mouse_genomes_project 6 33054664 33057068 - TEC TEC MGP_BALBcJ_T0004945.1 MGP_BALBcJ_G0004244.1 mouse_genomes_project 6 56355663 56363024 + Gm45060 antisense antisense MGP_BALBcJ_T0101960.1 MGP_BALBcJ_G0039817.1 mouse_genomes_project 6 129872568 129925411 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0015606.1 MGP_BALBcJ_G0013703.1 mouse_genomes_project 6 129779872 129781730 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078181.1 MGP_BALBcJ_G0030873.1 mouse_genomes_project 6 76189502 76192494 - MGP_BALBcJ_P0078181 Reg3d protein_coding protein_coding MGP_BALBcJ_T0078182.1 MGP_BALBcJ_G0030873.1 mouse_genomes_project 6 76189502 76192494 - MGP_BALBcJ_P0078182 Reg3d protein_coding protein_coding MGP_BALBcJ_T0078183.1 MGP_BALBcJ_G0030873.1 mouse_genomes_project 6 76189552 76192142 - MGP_BALBcJ_P0078183 Reg3d protein_coding protein_coding MGP_BALBcJ_T0078680.1 MGP_BALBcJ_G0030974.1 mouse_genomes_project 6 85547134 85590674 - MGP_BALBcJ_P0078680 Aplf protein_coding protein_coding MGP_BALBcJ_T0078681.1 MGP_BALBcJ_G0030974.1 mouse_genomes_project 6 85548208 85590591 - MGP_BALBcJ_P0078681 Aplf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078682.1 MGP_BALBcJ_G0030974.1 mouse_genomes_project 6 85548213 85590720 - MGP_BALBcJ_P0078682 Aplf protein_coding protein_coding MGP_BALBcJ_T0078683.1 MGP_BALBcJ_G0030974.1 mouse_genomes_project 6 85569556 85590656 - Aplf protein_coding retained_intron MGP_BALBcJ_T0000286.1 MGP_BALBcJ_G0000227.1 mouse_genomes_project 6 66048571 66048858 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015213.1 MGP_BALBcJ_G0013310.1 mouse_genomes_project 6 3924273 3925218 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078055.1 MGP_BALBcJ_G0030849.1 mouse_genomes_project 6 69955219 69983395 - MGP_BALBcJ_P0078055 Atoh8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078056.1 MGP_BALBcJ_G0030849.1 mouse_genomes_project 6 69955219 69984435 - MGP_BALBcJ_P0078056 Atoh8 protein_coding protein_coding MGP_BALBcJ_T0078057.1 MGP_BALBcJ_G0030849.1 mouse_genomes_project 6 69972784 69984088 - Atoh8 protein_coding processed_transcript MGP_BALBcJ_T0080506.1 MGP_BALBcJ_G0031342.1 mouse_genomes_project 6 128457096 128590071 - MGP_BALBcJ_P0080506 protein_coding protein_coding MGP_BALBcJ_T0004877.1 MGP_BALBcJ_G0004194.1 mouse_genomes_project 6 2690808 2704502 - 1700019G24Rik antisense antisense MGP_BALBcJ_T0101286.1 MGP_BALBcJ_G0039322.1 mouse_genomes_project 6 114670408 114670532 - Gm22882 snoRNA snoRNA MGP_BALBcJ_T0008521.1 MGP_BALBcJ_G0006895.1 mouse_genomes_project 6 28177407 28188386 + Gm13844 lincRNA lincRNA MGP_BALBcJ_T0001962.1 MGP_BALBcJ_G0001875.1 mouse_genomes_project 6 42356062 42357326 + TEC TEC MGP_BALBcJ_T0079777.1 MGP_BALBcJ_G0031180.1 mouse_genomes_project 6 118109593 118149589 - B4galnt3 protein_coding processed_transcript MGP_BALBcJ_T0079778.1 MGP_BALBcJ_G0031180.1 mouse_genomes_project 6 118109614 118205448 - MGP_BALBcJ_P0079778 B4galnt3 protein_coding protein_coding MGP_BALBcJ_T0080927.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142617716 143006050 - MGP_BALBcJ_P0080927 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080928.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142617716 143006114 - MGP_BALBcJ_P0080928 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080929.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142620870 143006110 - MGP_BALBcJ_P0080929 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080930.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142622090 142740983 - MGP_BALBcJ_P0080930 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080931.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142622225 143006022 - MGP_BALBcJ_P0080931 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080932.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142628595 142740978 - Sox5 protein_coding processed_transcript MGP_BALBcJ_T0080933.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142632786 143581540 - Sox5 protein_coding retained_intron MGP_BALBcJ_T0080934.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142633862 142740974 - MGP_BALBcJ_P0080934 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080935.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142650696 142740965 - MGP_BALBcJ_P0080935 Sox5 protein_coding protein_coding MGP_BALBcJ_T0080936.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142700091 143000997 - Sox5 protein_coding retained_intron MGP_BALBcJ_T0080937.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142815461 143006050 - Sox5 protein_coding retained_intron MGP_BALBcJ_T0080938.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142899781 143581482 - Sox5 protein_coding processed_transcript MGP_BALBcJ_T0080939.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142911832 143000627 - Sox5 protein_coding processed_transcript MGP_BALBcJ_T0080940.1 MGP_BALBcJ_G0031456.1 mouse_genomes_project 6 142950143 143006114 - Sox5 protein_coding retained_intron MGP_BALBcJ_T0002033.1 MGP_BALBcJ_G0001946.1 mouse_genomes_project 6 79700025 79701558 - TEC TEC MGP_BALBcJ_T0078677.1 MGP_BALBcJ_G0030973.1 mouse_genomes_project 6 85496879 85509031 - MGP_BALBcJ_P0078677 Prokr1 protein_coding protein_coding MGP_BALBcJ_T0078678.1 MGP_BALBcJ_G0030973.1 mouse_genomes_project 6 85496880 85509008 - MGP_BALBcJ_P0078678 Prokr1 protein_coding protein_coding MGP_BALBcJ_T0078679.1 MGP_BALBcJ_G0030973.1 mouse_genomes_project 6 85506690 85509007 - MGP_BALBcJ_P0078679 Prokr1 protein_coding protein_coding MGP_BALBcJ_T0077177.1 MGP_BALBcJ_G0030614.1 mouse_genomes_project 6 38595279 38610853 - MGP_BALBcJ_P0077177 Trpv6 protein_coding protein_coding MGP_BALBcJ_T0077178.1 MGP_BALBcJ_G0030614.1 mouse_genomes_project 6 38595282 38610853 - MGP_BALBcJ_P0077178 Trpv6 protein_coding protein_coding MGP_BALBcJ_T0077179.1 MGP_BALBcJ_G0030614.1 mouse_genomes_project 6 38598150 38610828 - Trpv6 protein_coding retained_intron MGP_BALBcJ_T0080312.1 MGP_BALBcJ_G0031289.1 mouse_genomes_project 6 125156469 125164890 + MGP_BALBcJ_P0080312 Fgf23 protein_coding protein_coding MGP_BALBcJ_T0005106.1 MGP_BALBcJ_G0004360.1 mouse_genomes_project 6 146213505 146249001 - Gm6288 antisense antisense MGP_BALBcJ_T0005107.1 MGP_BALBcJ_G0004360.1 mouse_genomes_project 6 146248319 146249232 - Gm6288 antisense antisense MGP_BALBcJ_T0001999.1 MGP_BALBcJ_G0001912.1 mouse_genomes_project 6 69175861 69178865 - TEC TEC MGP_BALBcJ_T0077764.1 MGP_BALBcJ_G0030765.1 mouse_genomes_project 6 54165759 54170151 + Vmn1r4 protein_coding retained_intron MGP_BALBcJ_T0077765.1 MGP_BALBcJ_G0030765.1 mouse_genomes_project 6 54165766 54206776 + MGP_BALBcJ_P0077765 Vmn1r4 protein_coding protein_coding MGP_BALBcJ_T0077766.1 MGP_BALBcJ_G0030765.1 mouse_genomes_project 6 54203659 54204693 + MGP_BALBcJ_P0077766 Vmn1r4 protein_coding protein_coding MGP_BALBcJ_T0076865.1 MGP_BALBcJ_G0030538.1 mouse_genomes_project 6 31027505 31051235 - MGP_BALBcJ_P0076865 Slc35b4 protein_coding protein_coding MGP_BALBcJ_T0076866.1 MGP_BALBcJ_G0030538.1 mouse_genomes_project 6 31030848 31037606 - Slc35b4 protein_coding retained_intron MGP_BALBcJ_T0076867.1 MGP_BALBcJ_G0030538.1 mouse_genomes_project 6 31032210 31051094 - Slc35b4 protein_coding retained_intron MGP_BALBcJ_T0076868.1 MGP_BALBcJ_G0030538.1 mouse_genomes_project 6 31034643 31051206 - MGP_BALBcJ_P0076868 Slc35b4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010754.1 MGP_BALBcJ_G0008879.1 mouse_genomes_project 6 53420265 53420369 - Gm44413 miRNA miRNA MGP_BALBcJ_T0078850.1 MGP_BALBcJ_G0031005.1 mouse_genomes_project 6 87846202 87856063 + MGP_BALBcJ_P0078850 Vmn1r44 protein_coding protein_coding MGP_BALBcJ_T0078851.1 MGP_BALBcJ_G0031005.1 mouse_genomes_project 6 87855755 87856863 + MGP_BALBcJ_P0078851 Vmn1r44 protein_coding protein_coding MGP_BALBcJ_T0080530.1 MGP_BALBcJ_G0031352.1 mouse_genomes_project 6 129714238 129737909 - MGP_BALBcJ_P0080530 Ybx3 protein_coding protein_coding MGP_BALBcJ_T0080531.1 MGP_BALBcJ_G0031352.1 mouse_genomes_project 6 129714238 129737871 - MGP_BALBcJ_P0080531 Ybx3 protein_coding protein_coding MGP_BALBcJ_T0080532.1 MGP_BALBcJ_G0031352.1 mouse_genomes_project 6 129714473 129727697 - Ybx3 protein_coding processed_transcript MGP_BALBcJ_T0080533.1 MGP_BALBcJ_G0031352.1 mouse_genomes_project 6 129714483 129718427 - Ybx3 protein_coding retained_intron MGP_BALBcJ_T0080534.1 MGP_BALBcJ_G0031352.1 mouse_genomes_project 6 129725610 129727958 - Ybx3 protein_coding processed_transcript MGP_BALBcJ_T0099999.1 MGP_BALBcJ_G0038035.1 mouse_genomes_project 6 38576384 38576446 - Gm27549 snRNA snRNA MGP_BALBcJ_T0080047.1 MGP_BALBcJ_G0031241.1 mouse_genomes_project 6 122830082 122831592 - Grcc10 protein_coding processed_transcript MGP_BALBcJ_T0080048.1 MGP_BALBcJ_G0031241.1 mouse_genomes_project 6 122830082 122832271 - MGP_BALBcJ_P0080048 Grcc10 protein_coding protein_coding MGP_BALBcJ_T0080049.1 MGP_BALBcJ_G0031241.1 mouse_genomes_project 6 122830085 122831962 - Grcc10 protein_coding retained_intron MGP_BALBcJ_T0080050.1 MGP_BALBcJ_G0031241.1 mouse_genomes_project 6 122830086 122831612 - Grcc10 protein_coding retained_intron MGP_BALBcJ_T0101271.1 MGP_BALBcJ_G0039307.1 mouse_genomes_project 6 79617206 79617324 + Gm22530 snoRNA snoRNA MGP_BALBcJ_T0077165.1 MGP_BALBcJ_G0030605.1 mouse_genomes_project 6 37959952 37964374 - MGP_BALBcJ_P0077165 Gm2663 protein_coding protein_coding MGP_BALBcJ_T0000157.1 MGP_BALBcJ_G0000119.1 mouse_genomes_project 6 66307953 66308424 + MGP_BALBcJ_P0000157 Igkv10-94 IG_V_gene IG_V_gene MGP_BALBcJ_T0015620.1 MGP_BALBcJ_G0013717.1 mouse_genomes_project 6 131433602 131434251 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002092.1 MGP_BALBcJ_G0002005.1 mouse_genomes_project 6 97714646 97718420 - TEC TEC MGP_BALBcJ_T0005091.1 MGP_BALBcJ_G0004346.1 mouse_genomes_project 6 140048359 140051710 - Gm28523 antisense antisense MGP_BALBcJ_T0080693.1 MGP_BALBcJ_G0031410.1 mouse_genomes_project 6 135562404 135591807 + BC049715 protein_coding retained_intron MGP_BALBcJ_T0080694.1 MGP_BALBcJ_G0031410.1 mouse_genomes_project 6 135562758 135598646 + MGP_BALBcJ_P0080694 BC049715 protein_coding protein_coding MGP_BALBcJ_T0080695.1 MGP_BALBcJ_G0031410.1 mouse_genomes_project 6 135563613 135599384 + MGP_BALBcJ_P0080695 BC049715 protein_coding protein_coding MGP_BALBcJ_T0080696.1 MGP_BALBcJ_G0031410.1 mouse_genomes_project 6 135598611 135599355 + MGP_BALBcJ_P0080696 BC049715 protein_coding protein_coding MGP_BALBcJ_T0015585.1 MGP_BALBcJ_G0013682.1 mouse_genomes_project 6 126715893 126716209 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011606.1 MGP_BALBcJ_G0009731.1 mouse_genomes_project 6 14435567 14435742 + Gm27365 misc_RNA misc_RNA MGP_BALBcJ_T0077160.1 MGP_BALBcJ_G0030602.1 mouse_genomes_project 6 37888201 37907657 - MGP_BALBcJ_P0077160 1700074P13Rik protein_coding protein_coding MGP_BALBcJ_T0077161.1 MGP_BALBcJ_G0030602.1 mouse_genomes_project 6 37888224 37907717 - MGP_BALBcJ_P0077161 1700074P13Rik protein_coding protein_coding MGP_BALBcJ_T0077162.1 MGP_BALBcJ_G0030602.1 mouse_genomes_project 6 37889548 37897498 - MGP_BALBcJ_P0077162 1700074P13Rik protein_coding protein_coding MGP_BALBcJ_T0002185.1 MGP_BALBcJ_G0002097.1 mouse_genomes_project 6 147808164 147810888 - TEC TEC MGP_BALBcJ_T0100043.1 MGP_BALBcJ_G0038079.1 mouse_genomes_project 6 147809556 147809663 - Gm22578 snRNA snRNA MGP_BALBcJ_T0079948.1 MGP_BALBcJ_G0031214.1 mouse_genomes_project 6 120934864 120950621 + MGP_BALBcJ_P0079948 Necap1 protein_coding protein_coding MGP_BALBcJ_T0079949.1 MGP_BALBcJ_G0031214.1 mouse_genomes_project 6 120934939 120936401 + Necap1 protein_coding processed_transcript MGP_BALBcJ_T0079950.1 MGP_BALBcJ_G0031214.1 mouse_genomes_project 6 120934961 120942832 + Necap1 protein_coding retained_intron MGP_BALBcJ_T0079951.1 MGP_BALBcJ_G0031214.1 mouse_genomes_project 6 120934971 120941547 + Necap1 protein_coding retained_intron MGP_BALBcJ_T0002108.1 MGP_BALBcJ_G0002021.1 mouse_genomes_project 6 101659923 101662029 + TEC TEC MGP_BALBcJ_T0015237.1 MGP_BALBcJ_G0013334.1 mouse_genomes_project 6 13661847 13663543 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079187.1 MGP_BALBcJ_G0031077.1 mouse_genomes_project 6 105546773 105587034 + MGP_BALBcJ_P0079187 Lrrn1 protein_coding protein_coding MGP_BALBcJ_T0015228.1 MGP_BALBcJ_G0013325.1 mouse_genomes_project 6 9733641 9734644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101740.1 MGP_BALBcJ_G0039706.1 mouse_genomes_project 6 39072465 39073314 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101741.1 MGP_BALBcJ_G0039706.1 mouse_genomes_project 6 39072873 39073233 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0077974.1 MGP_BALBcJ_G0030835.1 mouse_genomes_project 6 68957537 69005307 - MGP_BALBcJ_P0077974 Smyd1 protein_coding protein_coding MGP_BALBcJ_T0077975.1 MGP_BALBcJ_G0030835.1 mouse_genomes_project 6 68957539 69005279 - MGP_BALBcJ_P0077975 Smyd1 protein_coding protein_coding MGP_BALBcJ_T0077976.1 MGP_BALBcJ_G0030835.1 mouse_genomes_project 6 68958936 69065338 - MGP_BALBcJ_P0077976 Smyd1 protein_coding protein_coding MGP_BALBcJ_T0077977.1 MGP_BALBcJ_G0030835.1 mouse_genomes_project 6 68959094 68960469 - MGP_BALBcJ_P0077977 Smyd1 protein_coding protein_coding MGP_BALBcJ_T0077978.1 MGP_BALBcJ_G0030835.1 mouse_genomes_project 6 69002631 69005258 - MGP_BALBcJ_P0077978 Smyd1 protein_coding protein_coding MGP_BALBcJ_T0077983.1 MGP_BALBcJ_G0030835.1 mouse_genomes_project 6 69055647 69065311 - MGP_BALBcJ_P0077983 Smyd1 protein_coding protein_coding MGP_BALBcJ_T0077775.1 MGP_BALBcJ_G0030774.1 mouse_genomes_project 6 54507216 54508119 + MGP_BALBcJ_P0077775 Vmn1r13 protein_coding protein_coding MGP_BALBcJ_T0004899.1 MGP_BALBcJ_G0004209.1 mouse_genomes_project 6 27555451 27556347 - Gm44296 antisense antisense MGP_BALBcJ_T0079872.1 MGP_BALBcJ_G0031198.1 mouse_genomes_project 6 119296514 119396172 - MGP_BALBcJ_P0079872 Iqsec3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079873.1 MGP_BALBcJ_G0031198.1 mouse_genomes_project 6 119296514 119396130 - MGP_BALBcJ_P0079873 Iqsec3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079874.1 MGP_BALBcJ_G0031198.1 mouse_genomes_project 6 119296514 119396185 - MGP_BALBcJ_P0079874 Iqsec3 protein_coding protein_coding MGP_BALBcJ_T0079875.1 MGP_BALBcJ_G0031198.1 mouse_genomes_project 6 119303415 119396070 - MGP_BALBcJ_P0079875 Iqsec3 protein_coding unknown_likely_coding MGP_BALBcJ_T0079876.1 MGP_BALBcJ_G0031198.1 mouse_genomes_project 6 119327603 119396185 - MGP_BALBcJ_P0079876 Iqsec3 protein_coding protein_coding MGP_BALBcJ_T0079718.1 MGP_BALBcJ_G0031174.1 mouse_genomes_project 6 117328872 117441379 - MGP_BALBcJ_P0079718 Wnt5b protein_coding protein_coding MGP_BALBcJ_T0079719.1 MGP_BALBcJ_G0031174.1 mouse_genomes_project 6 117329736 117344156 - MGP_BALBcJ_P0079719 Wnt5b protein_coding protein_coding MGP_BALBcJ_T0077918.1 MGP_BALBcJ_G0030819.1 mouse_genomes_project 6 64092862 64093897 - MGP_BALBcJ_P0077918 Vmn1r34 protein_coding protein_coding MGP_BALBcJ_T0102618.1 MGP_BALBcJ_G0040434.1 mouse_genomes_project 6 55370751 55371661 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0078757.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86438493 86454203 - MGP_BALBcJ_P0078757 Sec61a1 protein_coding protein_coding MGP_BALBcJ_T0078758.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86439715 86441286 - Sec61a1 protein_coding processed_transcript MGP_BALBcJ_T0078759.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86441087 86447701 - Sec61a1 protein_coding processed_transcript MGP_BALBcJ_T0078760.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86441243 86449195 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078761.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86443593 86448019 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078762.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86447334 86448091 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078763.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86449104 86454071 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078764.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86449500 86451274 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078765.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86450619 86454126 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078766.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86450657 86454089 - Sec61a1 protein_coding processed_transcript MGP_BALBcJ_T0078767.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86450677 86454201 - Sec61a1 protein_coding retained_intron MGP_BALBcJ_T0078768.1 MGP_BALBcJ_G0030990.1 mouse_genomes_project 6 86453475 86454091 - Sec61a1 protein_coding processed_transcript MGP_BALBcJ_T0079918.1 MGP_BALBcJ_G0031206.1 mouse_genomes_project 6 120581232 120591642 + MGP_BALBcJ_P0079918 Aicda protein_coding protein_coding MGP_BALBcJ_T0079919.1 MGP_BALBcJ_G0031206.1 mouse_genomes_project 6 120587931 120590538 + MGP_BALBcJ_P0079919 Aicda protein_coding protein_coding MGP_BALBcJ_T0015364.1 MGP_BALBcJ_G0013461.1 mouse_genomes_project 6 62717037 62717388 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102664.1 MGP_BALBcJ_G0040479.1 mouse_genomes_project 6 131427894 131429296 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0080438.1 MGP_BALBcJ_G0031320.1 mouse_genomes_project 6 127490015 127498141 - MGP_BALBcJ_P0080438 Cd69 protein_coding protein_coding MGP_BALBcJ_T0080439.1 MGP_BALBcJ_G0031320.1 mouse_genomes_project 6 127490949 127498071 - MGP_BALBcJ_P0080439 Cd69 protein_coding protein_coding MGP_BALBcJ_T0080440.1 MGP_BALBcJ_G0031320.1 mouse_genomes_project 6 127492141 127498074 - Cd69 protein_coding retained_intron MGP_BALBcJ_T0080441.1 MGP_BALBcJ_G0031320.1 mouse_genomes_project 6 127493092 127498074 - Cd69 protein_coding retained_intron MGP_BALBcJ_T0080442.1 MGP_BALBcJ_G0031320.1 mouse_genomes_project 6 127493869 127498074 - Cd69 protein_coding retained_intron MGP_BALBcJ_T0010772.1 MGP_BALBcJ_G0008897.1 mouse_genomes_project 6 92889987 92890055 + Gm23364 miRNA miRNA MGP_BALBcJ_T0008680.1 MGP_BALBcJ_G0007012.1 mouse_genomes_project 6 110234381 110236200 + 1700054K19Rik lincRNA lincRNA MGP_BALBcJ_T0004935.1 MGP_BALBcJ_G0004237.1 mouse_genomes_project 6 49377939 49384965 + Gm29430 antisense antisense MGP_BALBcJ_T0004936.1 MGP_BALBcJ_G0004237.1 mouse_genomes_project 6 49378770 49384892 + Gm29430 antisense antisense MGP_BALBcJ_T0078138.1 MGP_BALBcJ_G0030864.1 mouse_genomes_project 6 70382274 70548037 - MGP_BALBcJ_P0078138 Tcf7l1 protein_coding protein_coding MGP_BALBcJ_T0078139.1 MGP_BALBcJ_G0030864.1 mouse_genomes_project 6 70383166 70547735 - MGP_BALBcJ_P0078139 Tcf7l1 protein_coding protein_coding MGP_BALBcJ_T0078140.1 MGP_BALBcJ_G0030864.1 mouse_genomes_project 6 70383485 70386119 - Tcf7l1 protein_coding processed_transcript MGP_BALBcJ_T0078141.1 MGP_BALBcJ_G0030864.1 mouse_genomes_project 6 70388813 70547381 - MGP_BALBcJ_P0078141 Tcf7l1 protein_coding protein_coding MGP_BALBcJ_T0078142.1 MGP_BALBcJ_G0030864.1 mouse_genomes_project 6 70405050 70427564 - Tcf7l1 protein_coding processed_transcript MGP_BALBcJ_T0005013.1 MGP_BALBcJ_G0004287.1 mouse_genomes_project 6 90038253 90041977 - 4930466I24Rik antisense antisense MGP_BALBcJ_T0078863.1 MGP_BALBcJ_G0031013.1 mouse_genomes_project 6 88286694 88290925 + MGP_BALBcJ_P0078863 BC048671 protein_coding protein_coding MGP_BALBcJ_T0078864.1 MGP_BALBcJ_G0031013.1 mouse_genomes_project 6 88287591 88290925 + MGP_BALBcJ_P0078864 BC048671 protein_coding protein_coding MGP_BALBcJ_T0076968.1 MGP_BALBcJ_G0030556.1 mouse_genomes_project 6 33258366 33395225 + MGP_BALBcJ_P0076968 Chrm2 protein_coding protein_coding MGP_BALBcJ_T0076969.1 MGP_BALBcJ_G0030556.1 mouse_genomes_project 6 33258477 33314931 + Chrm2 protein_coding processed_transcript MGP_BALBcJ_T0015277.1 MGP_BALBcJ_G0013374.1 mouse_genomes_project 6 35265689 35272024 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015482.1 MGP_BALBcJ_G0013579.1 mouse_genomes_project 6 97826749 97827215 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002076.1 MGP_BALBcJ_G0001989.1 mouse_genomes_project 6 89404291 89405493 + TEC TEC MGP_BALBcJ_T0076798.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27544130 27553137 + MGP_BALBcJ_P0076798 Mest protein_coding protein_coding MGP_BALBcJ_T0076799.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27544130 27563442 + MGP_BALBcJ_P0076799 Mest protein_coding protein_coding MGP_BALBcJ_T0076800.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27552390 27563446 + MGP_BALBcJ_P0076800 Mest protein_coding protein_coding MGP_BALBcJ_T0076801.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27553876 27563704 + MGP_BALBcJ_P0076801 Mest protein_coding protein_coding MGP_BALBcJ_T0076802.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27553928 27569330 + MGP_BALBcJ_P0076802 Mest protein_coding protein_coding MGP_BALBcJ_T0076803.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27558480 27569330 + MGP_BALBcJ_P0076803 Mest protein_coding protein_coding MGP_BALBcJ_T0076804.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27558483 27569333 + MGP_BALBcJ_P0076804 Mest protein_coding protein_coding MGP_BALBcJ_T0076805.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27558485 27559309 + Mest protein_coding processed_transcript MGP_BALBcJ_T0076806.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27561649 27564010 + Mest protein_coding retained_intron MGP_BALBcJ_T0076807.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27562943 27564008 + Mest protein_coding retained_intron MGP_BALBcJ_T0076808.1 MGP_BALBcJ_G0030527.1 mouse_genomes_project 6 27562956 27564018 + Mest protein_coding retained_intron MGP_BALBcJ_T0005611.1 MGP_BALBcJ_G0004726.1 mouse_genomes_project 6 135233102 135237135 - Gm44140 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005059.1 MGP_BALBcJ_G0004320.1 mouse_genomes_project 6 123089466 123129103 - Gm43989 antisense antisense MGP_BALBcJ_T0010759.1 MGP_BALBcJ_G0008884.1 mouse_genomes_project 6 72262536 72262646 - Gm22254 miRNA miRNA MGP_BALBcJ_T0077388.1 MGP_BALBcJ_G0030677.1 mouse_genomes_project 6 45675002 45690974 + MGP_BALBcJ_P0077388 Lrrc61 protein_coding protein_coding MGP_BALBcJ_T0077389.1 MGP_BALBcJ_G0030677.1 mouse_genomes_project 6 45675005 45688622 + MGP_BALBcJ_P0077389 Lrrc61 protein_coding protein_coding MGP_BALBcJ_T0077390.1 MGP_BALBcJ_G0030677.1 mouse_genomes_project 6 45675005 45688642 + MGP_BALBcJ_P0077390 Lrrc61 protein_coding protein_coding MGP_BALBcJ_T0077391.1 MGP_BALBcJ_G0030677.1 mouse_genomes_project 6 45675011 45690973 + MGP_BALBcJ_P0077391 Lrrc61 protein_coding protein_coding MGP_BALBcJ_T0077392.1 MGP_BALBcJ_G0030677.1 mouse_genomes_project 6 45675017 45688517 + Lrrc61 protein_coding processed_transcript MGP_BALBcJ_T0077393.1 MGP_BALBcJ_G0030677.1 mouse_genomes_project 6 45675035 45688825 + MGP_BALBcJ_P0077393 Lrrc61 protein_coding protein_coding MGP_BALBcJ_T0015479.1 MGP_BALBcJ_G0013576.1 mouse_genomes_project 6 95939914 95940166 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076972.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33718770 34177698 - MGP_BALBcJ_P0076972 Dgki protein_coding protein_coding MGP_BALBcJ_T0076973.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33719729 34177908 - MGP_BALBcJ_P0076973 Dgki protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076974.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33719729 34177908 - MGP_BALBcJ_P0076974 Dgki protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076975.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33719729 34177908 - MGP_BALBcJ_P0076975 Dgki protein_coding protein_coding MGP_BALBcJ_T0076976.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33719904 34177361 - MGP_BALBcJ_P0076976 Dgki protein_coding protein_coding MGP_BALBcJ_T0076977.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33788017 33904569 - Dgki protein_coding processed_transcript MGP_BALBcJ_T0076978.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 33908148 33938039 - Dgki protein_coding processed_transcript MGP_BALBcJ_T0076979.1 MGP_BALBcJ_G0030558.1 mouse_genomes_project 6 34106926 34177468 - Dgki protein_coding processed_transcript MGP_BALBcJ_T0011619.1 MGP_BALBcJ_G0009744.1 mouse_genomes_project 6 44893883 44893995 - Rny1 misc_RNA misc_RNA MGP_BALBcJ_T0015384.1 MGP_BALBcJ_G0013481.1 mouse_genomes_project 6 64681235 64682490 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002151.1 MGP_BALBcJ_G0002063.1 mouse_genomes_project 6 131448059 131449883 + TEC TEC MGP_BALBcJ_T0002023.1 MGP_BALBcJ_G0001936.1 mouse_genomes_project 6 75553761 75557793 - TEC TEC MGP_BALBcJ_T0079735.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803953 117816662 + Rad52 protein_coding processed_transcript MGP_BALBcJ_T0079736.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803958 117824500 + MGP_BALBcJ_P0079736 Rad52 protein_coding protein_coding MGP_BALBcJ_T0079737.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803958 117824505 + MGP_BALBcJ_P0079737 Rad52 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079738.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803960 117815051 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0079739.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803960 117814424 + Rad52 protein_coding processed_transcript MGP_BALBcJ_T0079740.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803983 117822558 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0079741.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803989 117820411 + Rad52 protein_coding processed_transcript MGP_BALBcJ_T0079742.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803989 117820411 + Rad52 protein_coding processed_transcript MGP_BALBcJ_T0079743.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117803994 117822056 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0079744.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117804031 117824500 + MGP_BALBcJ_P0079744 Rad52 protein_coding protein_coding MGP_BALBcJ_T0079745.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117814564 117815545 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0079746.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117815277 117820029 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0079747.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117816578 117820174 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0079748.1 MGP_BALBcJ_G0031177.1 mouse_genomes_project 6 117819324 117822832 + Rad52 protein_coding retained_intron MGP_BALBcJ_T0080150.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088450 123115660 + Zfp384 protein_coding retained_intron MGP_BALBcJ_T0080151.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088471 123117098 + MGP_BALBcJ_P0080151 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080152.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088519 123117098 + Zfp384 protein_coding retained_intron MGP_BALBcJ_T0080153.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088530 123117326 + MGP_BALBcJ_P0080153 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080154.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088569 123111390 + Zfp384 protein_coding processed_transcript MGP_BALBcJ_T0080155.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088576 123117221 + MGP_BALBcJ_P0080155 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080156.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123088962 123117331 + MGP_BALBcJ_P0080156 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080157.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089006 123104117 + Zfp384 protein_coding processed_transcript MGP_BALBcJ_T0080158.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089008 123104263 + MGP_BALBcJ_P0080158 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080159.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089028 123117098 + MGP_BALBcJ_P0080159 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080160.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089029 123117098 + MGP_BALBcJ_P0080160 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080161.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089038 123112273 + Zfp384 protein_coding retained_intron MGP_BALBcJ_T0080162.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089098 123117098 + MGP_BALBcJ_P0080162 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080163.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123089685 123117098 + MGP_BALBcJ_P0080163 Zfp384 protein_coding protein_coding MGP_BALBcJ_T0080164.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123104136 123112269 + Zfp384 protein_coding retained_intron MGP_BALBcJ_T0080165.1 MGP_BALBcJ_G0031259.1 mouse_genomes_project 6 123109889 123117278 + Zfp384 protein_coding retained_intron MGP_BALBcJ_T0002713.1 MGP_BALBcJ_G0002589.1 mouse_genomes_project 6 38093884 38094369 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0076212.1 MGP_BALBcJ_G0030414.1 mouse_genomes_project 6 1893682 1920177 - MGP_BALBcJ_P0076212 Pon1 protein_coding protein_coding MGP_BALBcJ_T0076213.1 MGP_BALBcJ_G0030414.1 mouse_genomes_project 6 1894087 1920015 - MGP_BALBcJ_P0076213 Pon1 protein_coding protein_coding MGP_BALBcJ_T0076214.1 MGP_BALBcJ_G0030414.1 mouse_genomes_project 6 1898162 1920015 - MGP_BALBcJ_P0076214 Pon1 protein_coding protein_coding MGP_BALBcJ_T0076215.1 MGP_BALBcJ_G0030414.1 mouse_genomes_project 6 1911784 1919994 - Pon1 protein_coding retained_intron MGP_BALBcJ_T0001979.1 MGP_BALBcJ_G0001892.1 mouse_genomes_project 6 48068856 48069823 + TEC TEC MGP_BALBcJ_T0015404.1 MGP_BALBcJ_G0013501.1 mouse_genomes_project 6 67850376 67852022 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015382.1 MGP_BALBcJ_G0013479.1 mouse_genomes_project 6 64477256 64477551 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015442.1 MGP_BALBcJ_G0013539.1 mouse_genomes_project 6 82903784 82904178 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015323.1 MGP_BALBcJ_G0013420.1 mouse_genomes_project 6 47904749 47905875 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079827.1 MGP_BALBcJ_G0031191.1 mouse_genomes_project 6 118805503 118831328 - MGP_BALBcJ_P0079827 Bid protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079828.1 MGP_BALBcJ_G0031191.1 mouse_genomes_project 6 118806427 118831345 - MGP_BALBcJ_P0079828 Bid protein_coding protein_coding MGP_BALBcJ_T0079829.1 MGP_BALBcJ_G0031191.1 mouse_genomes_project 6 118809189 118811140 - Bid protein_coding retained_intron MGP_BALBcJ_T0079830.1 MGP_BALBcJ_G0031191.1 mouse_genomes_project 6 118813794 118831290 - MGP_BALBcJ_P0079830 Bid protein_coding protein_coding MGP_BALBcJ_T0079831.1 MGP_BALBcJ_G0031191.1 mouse_genomes_project 6 118820594 118831295 - Bid protein_coding processed_transcript MGP_BALBcJ_T0076200.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1624962 1884694 + MGP_BALBcJ_P0076200 Ppp1r9a protein_coding protein_coding MGP_BALBcJ_T0076201.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1625019 1797743 + MGP_BALBcJ_P0076201 Ppp1r9a protein_coding protein_coding MGP_BALBcJ_T0076202.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1625063 1885325 + MGP_BALBcJ_P0076202 Ppp1r9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076203.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1625776 1890756 + MGP_BALBcJ_P0076203 Ppp1r9a protein_coding protein_coding MGP_BALBcJ_T0076204.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1625829 1733868 + MGP_BALBcJ_P0076204 Ppp1r9a protein_coding protein_coding MGP_BALBcJ_T0076205.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1625888 1889618 + Ppp1r9a protein_coding retained_intron MGP_BALBcJ_T0076206.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1626244 1629244 + MGP_BALBcJ_P0076206 Ppp1r9a protein_coding protein_coding MGP_BALBcJ_T0076207.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1627872 1884921 + MGP_BALBcJ_P0076207 Ppp1r9a protein_coding protein_coding MGP_BALBcJ_T0076208.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1627872 1884913 + MGP_BALBcJ_P0076208 Ppp1r9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076209.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1628863 1879354 + MGP_BALBcJ_P0076209 Ppp1r9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076210.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1832252 1835381 + Ppp1r9a protein_coding processed_transcript MGP_BALBcJ_T0076211.1 MGP_BALBcJ_G0030413.1 mouse_genomes_project 6 1835052 1838102 + Ppp1r9a protein_coding retained_intron MGP_BALBcJ_T0000054.1 MGP_BALBcJ_G0000043.1 mouse_genomes_project 6 39984698 39985650 + MGP_BALBcJ_P0000054 Gm17472 IG_LV_gene IG_LV_gene MGP_BALBcJ_T0101289.1 MGP_BALBcJ_G0039325.1 mouse_genomes_project 6 121758236 121758363 - Gm22724 snoRNA snoRNA MGP_BALBcJ_T0002016.1 MGP_BALBcJ_G0001929.1 mouse_genomes_project 6 75191575 75194323 - TEC TEC MGP_BALBcJ_T0101292.1 MGP_BALBcJ_G0039328.1 mouse_genomes_project 6 122082881 122082957 - Gm24843 snoRNA snoRNA MGP_BALBcJ_T0015454.1 MGP_BALBcJ_G0013551.1 mouse_genomes_project 6 84183243 84184251 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002070.1 MGP_BALBcJ_G0001983.1 mouse_genomes_project 6 87314193 87315617 + TEC TEC MGP_BALBcJ_T0008659.1 MGP_BALBcJ_G0006996.1 mouse_genomes_project 6 93013182 93021060 + 4930511E03Rik lincRNA lincRNA MGP_BALBcJ_T0008501.1 MGP_BALBcJ_G0006882.1 mouse_genomes_project 6 18745069 18828410 - Gm26719 lincRNA lincRNA MGP_BALBcJ_T0010757.1 MGP_BALBcJ_G0008882.1 mouse_genomes_project 6 67872525 67872635 - Gm24096 miRNA miRNA MGP_BALBcJ_T0101251.1 MGP_BALBcJ_G0039287.1 mouse_genomes_project 6 46061841 46061971 + Gm24348 snoRNA snoRNA MGP_BALBcJ_T0002021.1 MGP_BALBcJ_G0001934.1 mouse_genomes_project 6 75400385 75401872 - TEC TEC MGP_BALBcJ_T0008669.1 MGP_BALBcJ_G0007003.1 mouse_genomes_project 6 98607829 98614147 + 1700049E22Rik lincRNA lincRNA MGP_BALBcJ_T0077902.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63245888 63406144 + MGP_BALBcJ_P0077902 Prdm5 protein_coding protein_coding MGP_BALBcJ_T0077903.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63245922 63304404 + Prdm5 protein_coding retained_intron MGP_BALBcJ_T0077904.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63245922 63406141 + MGP_BALBcJ_P0077904 Prdm5 protein_coding protein_coding MGP_BALBcJ_T0077905.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63245925 63406066 + MGP_BALBcJ_P0077905 Prdm5 protein_coding protein_coding MGP_BALBcJ_T0077906.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63245994 63251517 + Prdm5 protein_coding retained_intron MGP_BALBcJ_T0077907.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63246061 63406097 + MGP_BALBcJ_P0077907 Prdm5 protein_coding protein_coding MGP_BALBcJ_T0077908.1 MGP_BALBcJ_G0030812.1 mouse_genomes_project 6 63404858 63406778 + Prdm5 protein_coding retained_intron MGP_BALBcJ_T0015495.1 MGP_BALBcJ_G0013592.1 mouse_genomes_project 6 101611911 101612869 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098381.1 MGP_BALBcJ_G0036435.1 mouse_genomes_project 6 3456839 3458017 - pseudogene pseudogene MGP_BALBcJ_T0078915.1 MGP_BALBcJ_G0031023.1 mouse_genomes_project 6 89146112 89164246 + MGP_BALBcJ_P0078915 Hdac11 protein_coding protein_coding MGP_BALBcJ_T0078916.1 MGP_BALBcJ_G0031023.1 mouse_genomes_project 6 89146180 89149080 + Hdac11 protein_coding retained_intron MGP_BALBcJ_T0078917.1 MGP_BALBcJ_G0031023.1 mouse_genomes_project 6 89146188 89156084 + MGP_BALBcJ_P0078917 Hdac11 protein_coding protein_coding MGP_BALBcJ_T0078918.1 MGP_BALBcJ_G0031023.1 mouse_genomes_project 6 89146526 89157410 + Hdac11 protein_coding retained_intron MGP_BALBcJ_T0078919.1 MGP_BALBcJ_G0031023.1 mouse_genomes_project 6 89155212 89159021 + MGP_BALBcJ_P0078919 Hdac11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078920.1 MGP_BALBcJ_G0031023.1 mouse_genomes_project 6 89161325 89162845 + Hdac11 protein_coding retained_intron MGP_BALBcJ_T0076980.1 MGP_BALBcJ_G0030559.1 mouse_genomes_project 6 34204765 34323879 - MGP_BALBcJ_P0076980 Creb3l2 protein_coding protein_coding MGP_BALBcJ_T0076981.1 MGP_BALBcJ_G0030559.1 mouse_genomes_project 6 34211603 34217019 - Creb3l2 protein_coding processed_transcript MGP_BALBcJ_T0008692.1 MGP_BALBcJ_G0007022.1 mouse_genomes_project 6 115470692 115498377 - Gm45083 lincRNA lincRNA MGP_BALBcJ_T0015291.1 MGP_BALBcJ_G0013388.1 mouse_genomes_project 6 39719857 39720023 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079698.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117126189 117244041 + MGP_BALBcJ_P0079698 Cacna2d4 protein_coding protein_coding MGP_BALBcJ_T0079699.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117126190 117166972 + Cacna2d4 protein_coding retained_intron MGP_BALBcJ_T0079700.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117126258 117242092 + MGP_BALBcJ_P0079700 Cacna2d4 protein_coding protein_coding MGP_BALBcJ_T0079701.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117138581 117192001 + Cacna2d4 protein_coding processed_transcript MGP_BALBcJ_T0079702.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117140306 117162044 + Cacna2d4 protein_coding processed_transcript MGP_BALBcJ_T0079703.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117157587 117161342 + Cacna2d4 protein_coding processed_transcript MGP_BALBcJ_T0079704.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117157788 117161385 + Cacna2d4 protein_coding retained_intron MGP_BALBcJ_T0079709.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117221359 117235700 + Cacna2d4 protein_coding processed_transcript MGP_BALBcJ_T0079710.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117221392 117228723 + Cacna2d4 protein_coding retained_intron MGP_BALBcJ_T0079711.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117223136 117238896 + Cacna2d4 protein_coding processed_transcript MGP_BALBcJ_T0079712.1 MGP_BALBcJ_G0031171.1 mouse_genomes_project 6 117225220 117241769 + MGP_BALBcJ_P0079712 Cacna2d4 protein_coding unknown_likely_coding MGP_BALBcJ_T0018217.1 MGP_BALBcJ_G0015568.1 mouse_genomes_project 6 49360549 49364326 + Hoxaas2 processed_transcript antisense MGP_BALBcJ_T0018218.1 MGP_BALBcJ_G0015568.1 mouse_genomes_project 6 49361393 49364439 + Hoxaas2 processed_transcript retained_intron MGP_BALBcJ_T0018219.1 MGP_BALBcJ_G0015568.1 mouse_genomes_project 6 49363385 49364439 + Hoxaas2 processed_transcript processed_transcript MGP_BALBcJ_T0004878.1 MGP_BALBcJ_G0004195.1 mouse_genomes_project 6 3542851 3586060 - Dlx6os1 antisense antisense MGP_BALBcJ_T0004879.1 MGP_BALBcJ_G0004195.1 mouse_genomes_project 6 3543205 3596044 - Dlx6os1 antisense antisense MGP_BALBcJ_T0008754.1 MGP_BALBcJ_G0007069.1 mouse_genomes_project 6 144796348 144798576 - Gm44269 lincRNA lincRNA MGP_BALBcJ_T0010736.1 MGP_BALBcJ_G0008861.1 mouse_genomes_project 6 26978483 26978558 - Mir182 miRNA miRNA MGP_BALBcJ_T0000188.1 MGP_BALBcJ_G0000142.1 mouse_genomes_project 6 67860035 67860684 - MGP_BALBcJ_P0000188 Igkv6-20 IG_V_gene IG_V_gene MGP_BALBcJ_T0000189.1 MGP_BALBcJ_G0000142.1 mouse_genomes_project 6 67860035 67860656 - MGP_BALBcJ_P0000189 Igkv6-20 IG_V_gene IG_V_gene MGP_BALBcJ_T0080717.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136039459 136169298 + Ptpro protein_coding retained_intron MGP_BALBcJ_T0080718.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136039474 136257658 + MGP_BALBcJ_P0080718 Ptpro protein_coding protein_coding MGP_BALBcJ_T0080719.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136039605 136257658 + MGP_BALBcJ_P0080719 Ptpro protein_coding protein_coding MGP_BALBcJ_T0080720.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136203318 136257664 + MGP_BALBcJ_P0080720 Ptpro protein_coding protein_coding MGP_BALBcJ_T0080721.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136203334 136257664 + MGP_BALBcJ_P0080721 Ptpro protein_coding protein_coding MGP_BALBcJ_T0080722.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136203356 136208640 + Ptpro protein_coding retained_intron MGP_BALBcJ_T0080723.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136247125 136256735 + Ptpro protein_coding processed_transcript MGP_BALBcJ_T0080724.1 MGP_BALBcJ_G0031417.1 mouse_genomes_project 6 136248472 136257053 + Ptpro protein_coding processed_transcript MGP_BALBcJ_T0076331.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10236399 10263534 - MGP_BALBcJ_P0076331 Tmem168 protein_coding protein_coding MGP_BALBcJ_T0076332.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10236803 10263446 - MGP_BALBcJ_P0076332 Tmem168 protein_coding protein_coding MGP_BALBcJ_T0076333.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10258811 10263182 - Tmem168 protein_coding processed_transcript MGP_BALBcJ_T0076334.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10258827 10263439 - Tmem168 protein_coding processed_transcript MGP_BALBcJ_T0076335.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10261370 10263478 - Tmem168 protein_coding processed_transcript MGP_BALBcJ_T0076336.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10262031 10263453 - Tmem168 protein_coding processed_transcript MGP_BALBcJ_T0076337.1 MGP_BALBcJ_G0030441.1 mouse_genomes_project 6 10262720 10263461 - Tmem168 protein_coding processed_transcript MGP_BALBcJ_T0002034.1 MGP_BALBcJ_G0001947.1 mouse_genomes_project 6 80110529 80114682 - TEC TEC MGP_BALBcJ_T0079196.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106220635 106549436 + MGP_BALBcJ_P0079196 Itpr1 protein_coding protein_coding MGP_BALBcJ_T0079197.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106220643 106549444 + MGP_BALBcJ_P0079197 Itpr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0079198.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106220741 106549436 + MGP_BALBcJ_P0079198 Itpr1 protein_coding protein_coding MGP_BALBcJ_T0079199.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106260920 106393422 + Itpr1 protein_coding retained_intron MGP_BALBcJ_T0079200.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106356792 106378203 + MGP_BALBcJ_P0079200 Itpr1 protein_coding protein_coding MGP_BALBcJ_T0079201.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106415636 106419416 + Itpr1 protein_coding retained_intron MGP_BALBcJ_T0079202.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106417210 106440951 + MGP_BALBcJ_P0079202 Itpr1 protein_coding protein_coding MGP_BALBcJ_T0079203.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106417277 106473625 + MGP_BALBcJ_P0079203 Itpr1 protein_coding protein_coding MGP_BALBcJ_T0079204.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106418291 106440906 + MGP_BALBcJ_P0079204 Itpr1 protein_coding protein_coding MGP_BALBcJ_T0079205.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106458886 106471108 + Itpr1 protein_coding processed_transcript MGP_BALBcJ_T0079206.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106506824 106511418 + Itpr1 protein_coding retained_intron MGP_BALBcJ_T0079207.1 MGP_BALBcJ_G0031080.1 mouse_genomes_project 6 106517232 106518174 + Itpr1 protein_coding retained_intron MGP_BALBcJ_T0015208.1 MGP_BALBcJ_G0013305.1 mouse_genomes_project 6 3057552 3057785 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008648.1 MGP_BALBcJ_G0006988.1 mouse_genomes_project 6 87238169 87254384 - Gm44205 lincRNA lincRNA MGP_BALBcJ_T0008649.1 MGP_BALBcJ_G0006988.1 mouse_genomes_project 6 87238175 87241866 - Gm44205 lincRNA lincRNA MGP_BALBcJ_T0008650.1 MGP_BALBcJ_G0006988.1 mouse_genomes_project 6 87253309 87254353 - Gm44205 lincRNA lincRNA MGP_BALBcJ_T0015334.1 MGP_BALBcJ_G0013431.1 mouse_genomes_project 6 54916368 54916621 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077571.1 MGP_BALBcJ_G0030719.1 mouse_genomes_project 6 49350433 49353164 - MGP_BALBcJ_P0077571 Hoxa1 protein_coding protein_coding MGP_BALBcJ_T0077572.1 MGP_BALBcJ_G0030719.1 mouse_genomes_project 6 49350438 49353164 - MGP_BALBcJ_P0077572 Hoxa1 protein_coding protein_coding MGP_BALBcJ_T0015207.1 MGP_BALBcJ_G0013304.1 mouse_genomes_project 6 1553703 1553875 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015322.1 MGP_BALBcJ_G0013419.1 mouse_genomes_project 6 47748654 47779647 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002102.1 MGP_BALBcJ_G0002015.1 mouse_genomes_project 6 99424577 99425536 - TEC TEC MGP_BALBcJ_T0079953.1 MGP_BALBcJ_G0031216.1 mouse_genomes_project 6 121011351 121022281 + MGP_BALBcJ_P0079953 Clec4a3 protein_coding protein_coding MGP_BALBcJ_T0079954.1 MGP_BALBcJ_G0031216.1 mouse_genomes_project 6 121011480 121022280 + MGP_BALBcJ_P0079954 Clec4a3 protein_coding protein_coding MGP_BALBcJ_T0079955.1 MGP_BALBcJ_G0031216.1 mouse_genomes_project 6 121011614 121019217 + MGP_BALBcJ_P0079955 Clec4a3 protein_coding protein_coding MGP_BALBcJ_T0002061.1 MGP_BALBcJ_G0001974.1 mouse_genomes_project 6 85922974 85924018 - TEC TEC MGP_BALBcJ_T0015401.1 MGP_BALBcJ_G0013498.1 mouse_genomes_project 6 65965784 65967295 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008756.1 MGP_BALBcJ_G0007071.1 mouse_genomes_project 6 145949988 145978203 + E330012B07Rik lincRNA lincRNA MGP_BALBcJ_T0008757.1 MGP_BALBcJ_G0007071.1 mouse_genomes_project 6 145950006 145972484 + E330012B07Rik lincRNA lincRNA MGP_BALBcJ_T0079991.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122423263 122441910 - MGP_BALBcJ_P0079991 Pex5 protein_coding protein_coding MGP_BALBcJ_T0079992.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122423264 122441276 - MGP_BALBcJ_P0079992 Pex5 protein_coding protein_coding MGP_BALBcJ_T0079993.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122423264 122441910 - MGP_BALBcJ_P0079993 Pex5 protein_coding protein_coding MGP_BALBcJ_T0079994.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122423264 122441706 - MGP_BALBcJ_P0079994 Pex5 protein_coding protein_coding MGP_BALBcJ_T0079995.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122423279 122441880 - MGP_BALBcJ_P0079995 Pex5 protein_coding protein_coding MGP_BALBcJ_T0079996.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122424358 122426434 - Pex5 protein_coding retained_intron MGP_BALBcJ_T0079997.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122429949 122440885 - Pex5 protein_coding processed_transcript MGP_BALBcJ_T0079998.1 MGP_BALBcJ_G0031231.1 mouse_genomes_project 6 122431132 122432187 - Pex5 protein_coding retained_intron MGP_BALBcJ_T0076167.1 MGP_BALBcJ_G0030408.1 mouse_genomes_project 6 788833 798902 - MGP_BALBcJ_P0076167 Bet1 protein_coding protein_coding MGP_BALBcJ_T0076168.1 MGP_BALBcJ_G0030408.1 mouse_genomes_project 6 789653 798849 - Bet1 protein_coding processed_transcript MGP_BALBcJ_T0076169.1 MGP_BALBcJ_G0030408.1 mouse_genomes_project 6 789807 792026 - Bet1 protein_coding retained_intron MGP_BALBcJ_T0076170.1 MGP_BALBcJ_G0030408.1 mouse_genomes_project 6 792252 798902 - Bet1 protein_coding retained_intron MGP_BALBcJ_T0076171.1 MGP_BALBcJ_G0030408.1 mouse_genomes_project 6 793429 798860 - Bet1 protein_coding processed_transcript MGP_BALBcJ_T0076172.1 MGP_BALBcJ_G0030408.1 mouse_genomes_project 6 793452 798860 - Bet1 protein_coding processed_transcript MGP_BALBcJ_T0078726.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85833399 85856116 + MGP_BALBcJ_P0078726 Hmces protein_coding protein_coding MGP_BALBcJ_T0078727.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85833414 85852542 + Hmces protein_coding processed_transcript MGP_BALBcJ_T0078728.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85833422 85834468 + Hmces protein_coding processed_transcript MGP_BALBcJ_T0078729.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85833443 85841020 + MGP_BALBcJ_P0078729 Hmces protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078730.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85833770 85856116 + MGP_BALBcJ_P0078730 Hmces protein_coding protein_coding MGP_BALBcJ_T0078731.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85837388 85852919 + Hmces protein_coding processed_transcript MGP_BALBcJ_T0078732.1 MGP_BALBcJ_G0030982.1 mouse_genomes_project 6 85852486 85856016 + Hmces protein_coding retained_intron MGP_BALBcJ_T0011636.1 MGP_BALBcJ_G0009761.1 mouse_genomes_project 6 81529192 81529379 + Gm27772 misc_RNA misc_RNA MGP_BALBcJ_T0015392.1 MGP_BALBcJ_G0013489.1 mouse_genomes_project 6 65081018 65081182 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077418.1 MGP_BALBcJ_G0030685.1 mouse_genomes_project 6 45768704 45781274 + MGP_BALBcJ_P0077418 Gimap8 protein_coding protein_coding MGP_BALBcJ_T0077419.1 MGP_BALBcJ_G0030685.1 mouse_genomes_project 6 45768831 45781899 + MGP_BALBcJ_P0077419 Gimap8 protein_coding protein_coding MGP_BALBcJ_T0077420.1 MGP_BALBcJ_G0030685.1 mouse_genomes_project 6 45768854 45781862 + MGP_BALBcJ_P0077420 Gimap8 protein_coding protein_coding MGP_BALBcJ_T0102637.1 MGP_BALBcJ_G0040453.1 mouse_genomes_project 6 87876563 87877505 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015381.1 MGP_BALBcJ_G0013478.1 mouse_genomes_project 6 64467024 64467411 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015351.1 MGP_BALBcJ_G0013448.1 mouse_genomes_project 6 60079787 60080919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079713.1 MGP_BALBcJ_G0031173.1 mouse_genomes_project 6 117244781 117313729 - MGP_BALBcJ_P0079713 Adipor2 protein_coding protein_coding MGP_BALBcJ_T0079714.1 MGP_BALBcJ_G0031173.1 mouse_genomes_project 6 117245398 117280518 - MGP_BALBcJ_P0079714 Adipor2 protein_coding protein_coding MGP_BALBcJ_T0079715.1 MGP_BALBcJ_G0031173.1 mouse_genomes_project 6 117247096 117282118 - MGP_BALBcJ_P0079715 Adipor2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079716.1 MGP_BALBcJ_G0031173.1 mouse_genomes_project 6 117249318 117313715 - Adipor2 protein_coding retained_intron MGP_BALBcJ_T0079717.1 MGP_BALBcJ_G0031173.1 mouse_genomes_project 6 117261970 117313500 - MGP_BALBcJ_P0079717 Adipor2 protein_coding protein_coding MGP_BALBcJ_T0002661.1 MGP_BALBcJ_G0002546.1 mouse_genomes_project 6 38135278 38135773 + MGP_BALBcJ_P0002661 Trbv17 TR_V_gene TR_V_gene MGP_BALBcJ_T0078225.1 MGP_BALBcJ_G0030886.1 mouse_genomes_project 6 80714419 80742478 - MGP_BALBcJ_P0078225 Sema4f protein_coding protein_coding MGP_BALBcJ_T0078226.1 MGP_BALBcJ_G0030886.1 mouse_genomes_project 6 80716604 80719916 - Sema4f protein_coding processed_transcript MGP_BALBcJ_T0078227.1 MGP_BALBcJ_G0030886.1 mouse_genomes_project 6 80718544 80742478 - Sema4f protein_coding retained_intron MGP_BALBcJ_T0078228.1 MGP_BALBcJ_G0030886.1 mouse_genomes_project 6 80720931 80742254 - MGP_BALBcJ_P0078228 Sema4f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080274.1 MGP_BALBcJ_G0031279.1 mouse_genomes_project 6 124188751 124252932 - MGP_BALBcJ_P0080274 Ntf3 protein_coding protein_coding MGP_BALBcJ_T0080275.1 MGP_BALBcJ_G0031279.1 mouse_genomes_project 6 124188751 124251177 - MGP_BALBcJ_P0080275 Ntf3 protein_coding protein_coding MGP_BALBcJ_T0080276.1 MGP_BALBcJ_G0031279.1 mouse_genomes_project 6 124188751 124253127 - MGP_BALBcJ_P0080276 Ntf3 protein_coding protein_coding MGP_BALBcJ_T0004981.1 MGP_BALBcJ_G0004267.1 mouse_genomes_project 6 82760880 82764754 + Gm44012 antisense antisense MGP_BALBcJ_T0008604.1 MGP_BALBcJ_G0006953.1 mouse_genomes_project 6 68449746 68471101 + Gm43291 lincRNA lincRNA MGP_BALBcJ_T0098638.1 MGP_BALBcJ_G0036692.1 mouse_genomes_project 6 143829490 143829605 - Gm23071 rRNA rRNA MGP_BALBcJ_T0005086.1 MGP_BALBcJ_G0004343.1 mouse_genomes_project 6 137228155 137234062 + A830011K09Rik antisense antisense MGP_BALBcJ_T0005087.1 MGP_BALBcJ_G0004343.1 mouse_genomes_project 6 137228250 137232771 + A830011K09Rik antisense antisense MGP_BALBcJ_T0005088.1 MGP_BALBcJ_G0004343.1 mouse_genomes_project 6 137228321 137234695 + A830011K09Rik antisense antisense MGP_BALBcJ_T0080462.1 MGP_BALBcJ_G0031327.1 mouse_genomes_project 6 127703785 127725772 - MGP_BALBcJ_P0080462 Olr1 protein_coding protein_coding MGP_BALBcJ_T0080463.1 MGP_BALBcJ_G0031327.1 mouse_genomes_project 6 127706344 127725714 - MGP_BALBcJ_P0080463 Olr1 protein_coding protein_coding MGP_BALBcJ_T0080464.1 MGP_BALBcJ_G0031327.1 mouse_genomes_project 6 127706344 127725714 - MGP_BALBcJ_P0080464 Olr1 protein_coding protein_coding MGP_BALBcJ_T0080465.1 MGP_BALBcJ_G0031327.1 mouse_genomes_project 6 127706383 127715475 - MGP_BALBcJ_P0080465 Olr1 protein_coding protein_coding MGP_BALBcJ_T0080466.1 MGP_BALBcJ_G0031327.1 mouse_genomes_project 6 127718528 127725772 - MGP_BALBcJ_P0080466 Olr1 protein_coding protein_coding MGP_BALBcJ_T0015593.1 MGP_BALBcJ_G0013690.1 mouse_genomes_project 6 127900766 127901371 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002152.1 MGP_BALBcJ_G0002064.1 mouse_genomes_project 6 132715153 132716982 + TEC TEC MGP_BALBcJ_T0080951.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143910918 143970125 + MGP_BALBcJ_P0080951 Lrmp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080952.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143916971 143970131 + MGP_BALBcJ_P0080952 Lrmp protein_coding protein_coding MGP_BALBcJ_T0080953.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143916974 143964111 + Lrmp protein_coding retained_intron MGP_BALBcJ_T0080954.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143917013 143956409 + Lrmp protein_coding retained_intron MGP_BALBcJ_T0080955.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143932783 143955840 + MGP_BALBcJ_P0080955 Lrmp protein_coding protein_coding MGP_BALBcJ_T0080956.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143940690 143953886 + Lrmp protein_coding retained_intron MGP_BALBcJ_T0080957.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143940690 143956422 + MGP_BALBcJ_P0080957 Lrmp protein_coding protein_coding MGP_BALBcJ_T0080958.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143940693 143970125 + MGP_BALBcJ_P0080958 Lrmp protein_coding protein_coding MGP_BALBcJ_T0080959.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143952976 143966904 + Lrmp protein_coding processed_transcript MGP_BALBcJ_T0080960.1 MGP_BALBcJ_G0031458.1 mouse_genomes_project 6 143964704 143969874 + Lrmp protein_coding retained_intron MGP_BALBcJ_T0077005.1 MGP_BALBcJ_G0030565.1 mouse_genomes_project 6 35018854 35153313 - MGP_BALBcJ_P0077005 D630045J12Rik protein_coding protein_coding MGP_BALBcJ_T0077006.1 MGP_BALBcJ_G0030565.1 mouse_genomes_project 6 35021696 35043432 - D630045J12Rik protein_coding retained_intron MGP_BALBcJ_T0077007.1 MGP_BALBcJ_G0030565.1 mouse_genomes_project 6 35021702 35043375 - D630045J12Rik protein_coding retained_intron MGP_BALBcJ_T0077008.1 MGP_BALBcJ_G0030565.1 mouse_genomes_project 6 35033120 35093615 - D630045J12Rik protein_coding retained_intron MGP_BALBcJ_T0077009.1 MGP_BALBcJ_G0030565.1 mouse_genomes_project 6 35054098 35065571 - D630045J12Rik protein_coding retained_intron MGP_BALBcJ_T0100027.1 MGP_BALBcJ_G0038063.1 mouse_genomes_project 6 111079800 111079906 + Gm22591 snRNA snRNA MGP_BALBcJ_T0077622.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493340 50600187 + 9430076C15Rik protein_coding retained_intron MGP_BALBcJ_T0077623.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493340 50909384 + MGP_BALBcJ_P0077623 9430076C15Rik protein_coding protein_coding MGP_BALBcJ_T0077624.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493356 50604336 + 9430076C15Rik protein_coding processed_transcript MGP_BALBcJ_T0077625.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493365 50606849 + 9430076C15Rik protein_coding processed_transcript MGP_BALBcJ_T0077626.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493388 50494793 + 9430076C15Rik protein_coding processed_transcript MGP_BALBcJ_T0077627.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493388 50856493 + 9430076C15Rik protein_coding processed_transcript MGP_BALBcJ_T0077628.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493388 50597596 + 9430076C15Rik protein_coding processed_transcript MGP_BALBcJ_T0077629.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493388 50819618 + 9430076C15Rik protein_coding retained_intron MGP_BALBcJ_T0077630.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50493391 50625390 + 9430076C15Rik protein_coding processed_transcript MGP_BALBcJ_T0077631.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50496508 50903822 + MGP_BALBcJ_P0077631 9430076C15Rik protein_coding protein_coding MGP_BALBcJ_T0077632.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50517174 50903822 + MGP_BALBcJ_P0077632 9430076C15Rik protein_coding protein_coding MGP_BALBcJ_T0077633.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50780866 50909375 + MGP_BALBcJ_P0077633 9430076C15Rik protein_coding protein_coding MGP_BALBcJ_T0077634.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50780941 50821114 + 9430076C15Rik protein_coding retained_intron MGP_BALBcJ_T0077635.1 MGP_BALBcJ_G0030736.1 mouse_genomes_project 6 50780942 50817964 + MGP_BALBcJ_P0077635 9430076C15Rik protein_coding protein_coding MGP_BALBcJ_T0076518.1 MGP_BALBcJ_G0030473.1 mouse_genomes_project 6 20406572 20407811 - MGP_BALBcJ_P0076518 Rnf148 protein_coding protein_coding MGP_BALBcJ_T0010783.1 MGP_BALBcJ_G0008908.1 mouse_genomes_project 6 113680266 113680329 + Mir7660 miRNA miRNA MGP_BALBcJ_T0001995.1 MGP_BALBcJ_G0001908.1 mouse_genomes_project 6 59463862 59465894 + TEC TEC MGP_BALBcJ_T0000303.1 MGP_BALBcJ_G0000244.1 mouse_genomes_project 6 67015743 67016206 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0081072.1 MGP_BALBcJ_G0031479.1 mouse_genomes_project 6 145808984 145816801 + Mrps35 protein_coding retained_intron MGP_BALBcJ_T0081073.1 MGP_BALBcJ_G0031479.1 mouse_genomes_project 6 145808984 145840508 + MGP_BALBcJ_P0081073 Mrps35 protein_coding protein_coding MGP_BALBcJ_T0081074.1 MGP_BALBcJ_G0031479.1 mouse_genomes_project 6 145810811 145822186 + MGP_BALBcJ_P0081074 Mrps35 protein_coding protein_coding MGP_BALBcJ_T0081075.1 MGP_BALBcJ_G0031479.1 mouse_genomes_project 6 145826548 145837342 + Mrps35 protein_coding processed_transcript MGP_BALBcJ_T0081076.1 MGP_BALBcJ_G0031479.1 mouse_genomes_project 6 145827560 145837421 + Mrps35 protein_coding processed_transcript MGP_BALBcJ_T0101241.1 MGP_BALBcJ_G0039277.1 mouse_genomes_project 6 21823515 21823647 - Gm24443 snoRNA snoRNA MGP_BALBcJ_T0015616.1 MGP_BALBcJ_G0013713.1 mouse_genomes_project 6 131121226 131121497 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076982.1 MGP_BALBcJ_G0030560.1 mouse_genomes_project 6 34419573 34456191 + MGP_BALBcJ_P0076982 Akr1d1 protein_coding protein_coding MGP_BALBcJ_T0076983.1 MGP_BALBcJ_G0030560.1 mouse_genomes_project 6 34429051 34444946 + Akr1d1 protein_coding processed_transcript MGP_BALBcJ_T0000048.1 MGP_BALBcJ_G0000039.1 mouse_genomes_project 6 68453895 68453931 + Igkj3 IG_J_gene processed_transcript MGP_BALBcJ_T0000049.1 MGP_BALBcJ_G0000039.1 mouse_genomes_project 6 68453895 68453933 + MGP_BALBcJ_P0000049 Igkj3 IG_J_gene IG_J_gene MGP_BALBcJ_T0005043.1 MGP_BALBcJ_G0004304.1 mouse_genomes_project 6 111964513 111966981 + Gm15082 antisense antisense MGP_BALBcJ_T0076875.1 MGP_BALBcJ_G0030540.1 mouse_genomes_project 6 31231191 31245244 + MGP_BALBcJ_P0076875 Akr1b8 protein_coding protein_coding MGP_BALBcJ_T0076876.1 MGP_BALBcJ_G0030540.1 mouse_genomes_project 6 31233187 31242020 + Akr1b8 protein_coding processed_transcript MGP_BALBcJ_T0002138.1 MGP_BALBcJ_G0002050.1 mouse_genomes_project 6 125403969 125404339 - TEC TEC MGP_BALBcJ_T0015231.1 MGP_BALBcJ_G0013328.1 mouse_genomes_project 6 10660809 10661163 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102654.1 MGP_BALBcJ_G0040469.1 mouse_genomes_project 6 128744248 128768881 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002145.1 MGP_BALBcJ_G0002057.1 mouse_genomes_project 6 126495467 126496178 + TEC TEC MGP_BALBcJ_T0002561.1 MGP_BALBcJ_G0002463.1 mouse_genomes_project 6 38515242 38515293 + MGP_BALBcJ_P0002561 Trbj1-4 TR_J_gene TR_J_gene MGP_BALBcJ_T0076571.1 MGP_BALBcJ_G0030490.1 mouse_genomes_project 6 25202075 25207709 - MGP_BALBcJ_P0076571 Gcc1 protein_coding protein_coding MGP_BALBcJ_T0076572.1 MGP_BALBcJ_G0030490.1 mouse_genomes_project 6 25203813 25214111 - MGP_BALBcJ_P0076572 Gcc1 protein_coding protein_coding MGP_BALBcJ_T0076573.1 MGP_BALBcJ_G0030490.1 mouse_genomes_project 6 25205646 25206843 - MGP_BALBcJ_P0076573 Gcc1 protein_coding protein_coding MGP_BALBcJ_T0076574.1 MGP_BALBcJ_G0030490.1 mouse_genomes_project 6 25207264 25209874 - MGP_BALBcJ_P0076574 Gcc1 protein_coding protein_coding MGP_BALBcJ_T0078855.1 MGP_BALBcJ_G0031008.1 mouse_genomes_project 6 87996439 88113715 + MGP_BALBcJ_P0078855 Vmn1r51 protein_coding protein_coding MGP_BALBcJ_T0078860.1 MGP_BALBcJ_G0031008.1 mouse_genomes_project 6 88111148 88113715 + MGP_BALBcJ_P0078860 Vmn1r51 protein_coding protein_coding MGP_BALBcJ_T0011651.1 MGP_BALBcJ_G0009776.1 mouse_genomes_project 6 139327943 139328196 + Gm25780 misc_RNA misc_RNA MGP_BALBcJ_T0077106.1 MGP_BALBcJ_G0030585.1 mouse_genomes_project 6 36557284 36685504 - MGP_BALBcJ_P0077106 Braf protein_coding protein_coding MGP_BALBcJ_T0077107.1 MGP_BALBcJ_G0030585.1 mouse_genomes_project 6 36568147 36685234 - MGP_BALBcJ_P0077107 Braf protein_coding protein_coding MGP_BALBcJ_T0077108.1 MGP_BALBcJ_G0030585.1 mouse_genomes_project 6 36593527 36599022 - Braf protein_coding retained_intron MGP_BALBcJ_T0077109.1 MGP_BALBcJ_G0030585.1 mouse_genomes_project 6 36594542 36597490 - Braf protein_coding retained_intron MGP_BALBcJ_T0077110.1 MGP_BALBcJ_G0030585.1 mouse_genomes_project 6 36605814 36619448 - Braf protein_coding retained_intron MGP_BALBcJ_T0077100.1 MGP_BALBcJ_G0030584.1 mouse_genomes_project 6 36546339 36557430 + MGP_BALBcJ_P0077100 Ndufb2 protein_coding protein_coding MGP_BALBcJ_T0077101.1 MGP_BALBcJ_G0030584.1 mouse_genomes_project 6 36546348 36553519 + MGP_BALBcJ_P0077101 Ndufb2 protein_coding protein_coding MGP_BALBcJ_T0077102.1 MGP_BALBcJ_G0030584.1 mouse_genomes_project 6 36546350 36553470 + Ndufb2 protein_coding processed_transcript MGP_BALBcJ_T0077103.1 MGP_BALBcJ_G0030584.1 mouse_genomes_project 6 36546353 36550795 + Ndufb2 protein_coding retained_intron MGP_BALBcJ_T0077104.1 MGP_BALBcJ_G0030584.1 mouse_genomes_project 6 36551311 36553340 + Ndufb2 protein_coding retained_intron MGP_BALBcJ_T0077105.1 MGP_BALBcJ_G0030584.1 mouse_genomes_project 6 36555831 36557358 + Ndufb2 protein_coding processed_transcript MGP_BALBcJ_T0080128.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123017962 123023844 + Mlf2 protein_coding retained_intron MGP_BALBcJ_T0080129.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123017981 123020991 + Mlf2 protein_coding retained_intron MGP_BALBcJ_T0080130.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123017981 123019265 + Mlf2 protein_coding retained_intron MGP_BALBcJ_T0080131.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123018001 123020985 + MGP_BALBcJ_P0080131 Mlf2 protein_coding protein_coding MGP_BALBcJ_T0080132.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123018008 123022751 + MGP_BALBcJ_P0080132 Mlf2 protein_coding protein_coding MGP_BALBcJ_T0080133.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123018052 123022750 + MGP_BALBcJ_P0080133 Mlf2 protein_coding protein_coding MGP_BALBcJ_T0080134.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123018486 123020977 + MGP_BALBcJ_P0080134 Mlf2 protein_coding protein_coding MGP_BALBcJ_T0080135.1 MGP_BALBcJ_G0031256.1 mouse_genomes_project 6 123019200 123021899 + Mlf2 protein_coding retained_intron MGP_BALBcJ_T0010791.1 MGP_BALBcJ_G0008916.1 mouse_genomes_project 6 122802980 122803052 - Mir141 miRNA miRNA MGP_BALBcJ_T0015390.1 MGP_BALBcJ_G0013487.1 mouse_genomes_project 6 65022747 65024003 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008623.1 MGP_BALBcJ_G0006971.1 mouse_genomes_project 6 80622965 80638345 + Gm43878 lincRNA lincRNA MGP_BALBcJ_T0008624.1 MGP_BALBcJ_G0006971.1 mouse_genomes_project 6 80632065 80638357 + Gm43878 lincRNA lincRNA MGP_BALBcJ_T0008625.1 MGP_BALBcJ_G0006971.1 mouse_genomes_project 6 80632100 80641208 + Gm43878 lincRNA lincRNA MGP_BALBcJ_T0077369.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45553216 45569558 - MGP_BALBcJ_P0077369 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077370.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45553216 45570701 - MGP_BALBcJ_P0077370 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077371.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45553216 45570804 - MGP_BALBcJ_P0077371 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077372.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45559685 45570610 - MGP_BALBcJ_P0077372 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077373.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45562160 45571062 - MGP_BALBcJ_P0077373 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077374.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45562160 45570323 - MGP_BALBcJ_P0077374 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077375.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45562160 45570317 - MGP_BALBcJ_P0077375 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077376.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45562183 45570679 - MGP_BALBcJ_P0077376 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077377.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45563179 45570930 - MGP_BALBcJ_P0077377 Zfp467 protein_coding protein_coding MGP_BALBcJ_T0077378.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45564937 45570595 - MGP_BALBcJ_P0077378 Zfp467 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077379.1 MGP_BALBcJ_G0030674.1 mouse_genomes_project 6 45568284 45570731 - Zfp467 protein_coding retained_intron MGP_BALBcJ_T0076600.1 MGP_BALBcJ_G0030496.1 mouse_genomes_project 6 25849006 25863491 + MGP_BALBcJ_P0076600 Lep protein_coding protein_coding MGP_BALBcJ_T0076601.1 MGP_BALBcJ_G0030496.1 mouse_genomes_project 6 25855093 25860603 + MGP_BALBcJ_P0076601 Lep protein_coding protein_coding MGP_BALBcJ_T0015467.1 MGP_BALBcJ_G0013564.1 mouse_genomes_project 6 91693010 91693883 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078866.1 MGP_BALBcJ_G0031015.1 mouse_genomes_project 6 88315700 88346959 + MGP_BALBcJ_P0078866 Uroc1 protein_coding protein_coding MGP_BALBcJ_T0078867.1 MGP_BALBcJ_G0031015.1 mouse_genomes_project 6 88315705 88346954 + MGP_BALBcJ_P0078867 Uroc1 protein_coding protein_coding MGP_BALBcJ_T0008635.1 MGP_BALBcJ_G0006978.1 mouse_genomes_project 6 84409668 84410362 - Gm43936 lincRNA lincRNA MGP_BALBcJ_T0077280.1 MGP_BALBcJ_G0030654.1 mouse_genomes_project 6 40224257 40228926 + MGP_BALBcJ_P0077280 Olfr437 protein_coding protein_coding MGP_BALBcJ_T0077281.1 MGP_BALBcJ_G0030654.1 mouse_genomes_project 6 40227908 40228926 + MGP_BALBcJ_P0077281 Olfr437 protein_coding protein_coding MGP_BALBcJ_T0098630.1 MGP_BALBcJ_G0036684.1 mouse_genomes_project 6 87217995 87218130 - Gm25961 rRNA rRNA MGP_BALBcJ_T0000308.1 MGP_BALBcJ_G0000249.1 mouse_genomes_project 6 67541195 67541645 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008599.1 MGP_BALBcJ_G0006949.1 mouse_genomes_project 6 58639584 58640272 - Gm43894 lincRNA lincRNA MGP_BALBcJ_T0078066.1 MGP_BALBcJ_G0030852.1 mouse_genomes_project 6 70098057 70101957 + 0610030E20Rik protein_coding retained_intron MGP_BALBcJ_T0078067.1 MGP_BALBcJ_G0030852.1 mouse_genomes_project 6 70098066 70099916 + 0610030E20Rik protein_coding retained_intron MGP_BALBcJ_T0078068.1 MGP_BALBcJ_G0030852.1 mouse_genomes_project 6 70098074 70104328 + MGP_BALBcJ_P0078068 0610030E20Rik protein_coding protein_coding MGP_BALBcJ_T0078069.1 MGP_BALBcJ_G0030852.1 mouse_genomes_project 6 70098107 70101358 + 0610030E20Rik protein_coding retained_intron MGP_BALBcJ_T0015379.1 MGP_BALBcJ_G0013476.1 mouse_genomes_project 6 64033850 64034610 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015266.1 MGP_BALBcJ_G0013363.1 mouse_genomes_project 6 29421558 29421793 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077380.1 MGP_BALBcJ_G0030675.1 mouse_genomes_project 6 45573445 45626559 + MGP_BALBcJ_P0077380 Sspo protein_coding protein_coding MGP_BALBcJ_T0077381.1 MGP_BALBcJ_G0030675.1 mouse_genomes_project 6 45573445 45626574 + MGP_BALBcJ_P0077381 Sspo protein_coding protein_coding MGP_BALBcJ_T0077382.1 MGP_BALBcJ_G0030675.1 mouse_genomes_project 6 45605966 45612852 + Sspo protein_coding retained_intron MGP_BALBcJ_T0077383.1 MGP_BALBcJ_G0030675.1 mouse_genomes_project 6 45613420 45626574 + MGP_BALBcJ_P0077383 Sspo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077384.1 MGP_BALBcJ_G0030675.1 mouse_genomes_project 6 45619107 45621534 + MGP_BALBcJ_P0077384 Sspo protein_coding protein_coding MGP_BALBcJ_T0018273.1 MGP_BALBcJ_G0015587.1 mouse_genomes_project 6 123347334 123370855 + processed_transcript antisense MGP_BALBcJ_T0018274.1 MGP_BALBcJ_G0015587.1 mouse_genomes_project 6 123347383 123348387 + processed_transcript retained_intron MGP_BALBcJ_T0018275.1 MGP_BALBcJ_G0015587.1 mouse_genomes_project 6 123347403 123352345 + processed_transcript antisense MGP_BALBcJ_T0018276.1 MGP_BALBcJ_G0015587.1 mouse_genomes_project 6 123347477 123355328 + processed_transcript antisense MGP_BALBcJ_T0002074.1 MGP_BALBcJ_G0001987.1 mouse_genomes_project 6 89162986 89163580 - TEC TEC MGP_BALBcJ_T0010728.1 MGP_BALBcJ_G0008853.1 mouse_genomes_project 6 15191030 15191100 - Gm26233 miRNA miRNA MGP_BALBcJ_T0008764.1 MGP_BALBcJ_G0007076.1 mouse_genomes_project 6 147361023 147363971 - Gm6313 lincRNA lincRNA MGP_BALBcJ_T0008765.1 MGP_BALBcJ_G0007076.1 mouse_genomes_project 6 147361023 147368547 - Gm6313 lincRNA lincRNA MGP_BALBcJ_T0078742.1 MGP_BALBcJ_G0030986.1 mouse_genomes_project 6 86125737 86138876 + MGP_BALBcJ_P0078742 Gata2 protein_coding protein_coding MGP_BALBcJ_T0078743.1 MGP_BALBcJ_G0030986.1 mouse_genomes_project 6 86130178 86138874 + MGP_BALBcJ_P0078743 Gata2 protein_coding protein_coding MGP_BALBcJ_T0078744.1 MGP_BALBcJ_G0030986.1 mouse_genomes_project 6 86130178 86131507 + MGP_BALBcJ_P0078744 Gata2 protein_coding protein_coding MGP_BALBcJ_T0078745.1 MGP_BALBcJ_G0030986.1 mouse_genomes_project 6 86132762 86134485 + Gata2 protein_coding retained_intron MGP_BALBcJ_T0078746.1 MGP_BALBcJ_G0030986.1 mouse_genomes_project 6 86136288 86137615 + Gata2 protein_coding retained_intron MGP_BALBcJ_T0000126.1 MGP_BALBcJ_G0000096.1 mouse_genomes_project 6 65309473 65310187 + MGP_BALBcJ_P0000126 Igkv1-132 IG_V_gene IG_V_gene MGP_BALBcJ_T0077836.1 MGP_BALBcJ_G0030798.1 mouse_genomes_project 6 56296103 56297947 - MGP_BALBcJ_P0077836 Nap1l5 protein_coding protein_coding MGP_BALBcJ_T0077837.1 MGP_BALBcJ_G0030798.1 mouse_genomes_project 6 56296674 56297544 - MGP_BALBcJ_P0077837 Nap1l5 protein_coding protein_coding MGP_BALBcJ_T0004898.1 MGP_BALBcJ_G0004208.1 mouse_genomes_project 6 27494069 27502391 + Gm13782 antisense antisense MGP_BALBcJ_T0010726.1 MGP_BALBcJ_G0008851.1 mouse_genomes_project 6 435007 435114 - Mir489 miRNA miRNA MGP_BALBcJ_T0001919.1 MGP_BALBcJ_G0001832.1 mouse_genomes_project 6 12521942 12523678 + TEC TEC MGP_BALBcJ_T0015579.1 MGP_BALBcJ_G0013676.1 mouse_genomes_project 6 125850642 125850868 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001975.1 MGP_BALBcJ_G0001888.1 mouse_genomes_project 6 43557538 43560013 + TEC TEC MGP_BALBcJ_T0000186.1 MGP_BALBcJ_G0000140.1 mouse_genomes_project 6 67779334 67779914 - MGP_BALBcJ_P0000186 Igkv6-32 IG_V_gene IG_V_gene MGP_BALBcJ_T0015453.1 MGP_BALBcJ_G0013550.1 mouse_genomes_project 6 83819605 83820382 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005096.1 MGP_BALBcJ_G0004351.1 mouse_genomes_project 6 143470670 143492622 + Sox5os3 antisense antisense MGP_BALBcJ_T0005097.1 MGP_BALBcJ_G0004351.1 mouse_genomes_project 6 143477891 143492372 + Sox5os3 antisense antisense MGP_BALBcJ_T0076461.1 MGP_BALBcJ_G0030462.1 mouse_genomes_project 6 18535282 18609462 - MGP_BALBcJ_P0076461 Tspan12 protein_coding protein_coding MGP_BALBcJ_T0076462.1 MGP_BALBcJ_G0030462.1 mouse_genomes_project 6 18535282 18608823 - MGP_BALBcJ_P0076462 Tspan12 protein_coding protein_coding MGP_BALBcJ_T0076463.1 MGP_BALBcJ_G0030462.1 mouse_genomes_project 6 18559379 18608716 - MGP_BALBcJ_P0076463 Tspan12 protein_coding protein_coding MGP_BALBcJ_T0076464.1 MGP_BALBcJ_G0030462.1 mouse_genomes_project 6 18563804 18608649 - MGP_BALBcJ_P0076464 Tspan12 protein_coding protein_coding MGP_BALBcJ_T0076465.1 MGP_BALBcJ_G0030462.1 mouse_genomes_project 6 18595717 18608904 - MGP_BALBcJ_P0076465 Tspan12 protein_coding protein_coding MGP_BALBcJ_T0076466.1 MGP_BALBcJ_G0030462.1 mouse_genomes_project 6 18607739 18608563 - MGP_BALBcJ_P0076466 Tspan12 protein_coding protein_coding MGP_BALBcJ_T0015519.1 MGP_BALBcJ_G0013616.1 mouse_genomes_project 6 111463321 111463730 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078098.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70182847 70190190 - MGP_BALBcJ_P0078098 Mat2a protein_coding protein_coding MGP_BALBcJ_T0078099.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70182847 70190192 - MGP_BALBcJ_P0078099 Mat2a protein_coding protein_coding MGP_BALBcJ_T0078100.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70182848 70185625 - MGP_BALBcJ_P0078100 Mat2a protein_coding protein_coding MGP_BALBcJ_T0078101.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70183948 70185710 - MGP_BALBcJ_P0078101 Mat2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078102.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70185178 70190190 - MGP_BALBcJ_P0078102 Mat2a protein_coding protein_coding MGP_BALBcJ_T0078103.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70186444 70190022 - MGP_BALBcJ_P0078103 Mat2a protein_coding protein_coding MGP_BALBcJ_T0078104.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70187050 70190174 - Mat2a protein_coding retained_intron MGP_BALBcJ_T0078105.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70187381 70190177 - Mat2a protein_coding retained_intron MGP_BALBcJ_T0078106.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70188033 70190182 - Mat2a protein_coding processed_transcript MGP_BALBcJ_T0078107.1 MGP_BALBcJ_G0030858.1 mouse_genomes_project 6 70189435 70190190 - Mat2a protein_coding retained_intron MGP_BALBcJ_T0000137.1 MGP_BALBcJ_G0000104.1 mouse_genomes_project 6 65503816 65504103 - MGP_BALBcJ_P0000137 IG_V_gene IG_V_gene MGP_BALBcJ_T0002707.1 MGP_BALBcJ_G0002583.1 mouse_genomes_project 6 38033004 38033280 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0011616.1 MGP_BALBcJ_G0009741.1 mouse_genomes_project 6 43111144 43111448 + Gm22839 misc_RNA misc_RNA MGP_BALBcJ_T0015475.1 MGP_BALBcJ_G0013572.1 mouse_genomes_project 6 93309490 93313696 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080055.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122850803 122854359 - Eno2 protein_coding retained_intron MGP_BALBcJ_T0080056.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122850805 122860192 - MGP_BALBcJ_P0080056 Eno2 protein_coding protein_coding MGP_BALBcJ_T0080057.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122850805 122860140 - MGP_BALBcJ_P0080057 Eno2 protein_coding protein_coding MGP_BALBcJ_T0080058.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122851115 122858856 - Eno2 protein_coding retained_intron MGP_BALBcJ_T0080059.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122851671 122860039 - MGP_BALBcJ_P0080059 Eno2 protein_coding protein_coding MGP_BALBcJ_T0080060.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122851904 122854033 - Eno2 protein_coding retained_intron MGP_BALBcJ_T0080061.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122851963 122854069 - Eno2 protein_coding retained_intron MGP_BALBcJ_T0080062.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122853403 122854668 - Eno2 protein_coding processed_transcript MGP_BALBcJ_T0080063.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122854513 122858849 - MGP_BALBcJ_P0080063 Eno2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080064.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122854616 122858895 - MGP_BALBcJ_P0080064 Eno2 protein_coding protein_coding MGP_BALBcJ_T0080065.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122856659 122860003 - MGP_BALBcJ_P0080065 Eno2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080066.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122856740 122858850 - MGP_BALBcJ_P0080066 Eno2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080067.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122856803 122860069 - MGP_BALBcJ_P0080067 Eno2 protein_coding protein_coding MGP_BALBcJ_T0080068.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122857288 122858856 - Eno2 protein_coding retained_intron MGP_BALBcJ_T0080069.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122857466 122860035 - Eno2 protein_coding retained_intron MGP_BALBcJ_T0080070.1 MGP_BALBcJ_G0031244.1 mouse_genomes_project 6 122858226 122860005 - MGP_BALBcJ_P0080070 Eno2 protein_coding protein_coding MGP_BALBcJ_T0102598.1 MGP_BALBcJ_G0040414.1 mouse_genomes_project 6 35457247 35461664 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0077247.1 MGP_BALBcJ_G0030636.1 mouse_genomes_project 6 39439843 39440785 - MGP_BALBcJ_P0077247 Olfr458 protein_coding protein_coding MGP_BALBcJ_T0079985.1 MGP_BALBcJ_G0031228.1 mouse_genomes_project 6 122216888 122254310 - MGP_BALBcJ_P0079985 Vmn2r27 protein_coding protein_coding MGP_BALBcJ_T0077268.1 MGP_BALBcJ_G0030646.1 mouse_genomes_project 6 39803929 39804862 + MGP_BALBcJ_P0077268 Olfr450 protein_coding protein_coding MGP_BALBcJ_T0076504.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040290 20583927 - MGP_BALBcJ_P0076504 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076505.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040290 20583926 - MGP_BALBcJ_P0076505 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076506.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040290 20583643 - MGP_BALBcJ_P0076506 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076507.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040340 20583731 - MGP_BALBcJ_P0076507 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076508.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040355 20583643 - MGP_BALBcJ_P0076508 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076509.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040356 20583730 - MGP_BALBcJ_P0076509 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076510.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20040360 20137162 - Cadps2 protein_coding processed_transcript MGP_BALBcJ_T0076511.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20041025 20340608 - MGP_BALBcJ_P0076511 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076512.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20041025 20583649 - MGP_BALBcJ_P0076512 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076513.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20041030 20094459 - Cadps2 protein_coding processed_transcript MGP_BALBcJ_T0076514.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20183559 20583769 - MGP_BALBcJ_P0076514 Cadps2 protein_coding protein_coding MGP_BALBcJ_T0076515.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20334891 20583806 - Cadps2 protein_coding retained_intron MGP_BALBcJ_T0076519.1 MGP_BALBcJ_G0030471.1 mouse_genomes_project 6 20433227 20583768 - Cadps2 protein_coding retained_intron MGP_BALBcJ_T0076526.1 MGP_BALBcJ_G0030477.1 mouse_genomes_project 6 21265332 21269535 - Ndufa5 protein_coding retained_intron MGP_BALBcJ_T0076527.1 MGP_BALBcJ_G0030477.1 mouse_genomes_project 6 21265332 21274239 - MGP_BALBcJ_P0076527 Ndufa5 protein_coding protein_coding MGP_BALBcJ_T0076528.1 MGP_BALBcJ_G0030477.1 mouse_genomes_project 6 21265332 21274682 - MGP_BALBcJ_P0076528 Ndufa5 protein_coding protein_coding MGP_BALBcJ_T0076529.1 MGP_BALBcJ_G0030477.1 mouse_genomes_project 6 21265333 21274195 - Ndufa5 protein_coding processed_transcript MGP_BALBcJ_T0077967.1 MGP_BALBcJ_G0030832.1 mouse_genomes_project 6 68695139 68699656 + MGP_BALBcJ_P0077967 Foxi3 protein_coding protein_coding MGP_BALBcJ_T0077968.1 MGP_BALBcJ_G0030832.1 mouse_genomes_project 6 68695214 68699659 + MGP_BALBcJ_P0077968 Foxi3 protein_coding protein_coding MGP_BALBcJ_T0015257.1 MGP_BALBcJ_G0013354.1 mouse_genomes_project 6 21580987 21581817 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080267.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123772121 124044744 + Ano2 protein_coding retained_intron MGP_BALBcJ_T0080268.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123772121 124120954 + MGP_BALBcJ_P0080268 Ano2 protein_coding protein_coding MGP_BALBcJ_T0080269.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123797828 124120954 + MGP_BALBcJ_P0080269 Ano2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080270.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123798678 123880798 + Ano2 protein_coding processed_transcript MGP_BALBcJ_T0080271.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123798792 124120342 + MGP_BALBcJ_P0080271 Ano2 protein_coding unknown_likely_coding MGP_BALBcJ_T0080272.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123902884 123989569 + Ano2 protein_coding processed_transcript MGP_BALBcJ_T0080273.1 MGP_BALBcJ_G0031278.1 mouse_genomes_project 6 123902885 124120952 + MGP_BALBcJ_P0080273 Ano2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078232.1 MGP_BALBcJ_G0030888.1 mouse_genomes_project 6 80834037 80836574 - MGP_BALBcJ_P0078232 Dok1 protein_coding protein_coding MGP_BALBcJ_T0078233.1 MGP_BALBcJ_G0030888.1 mouse_genomes_project 6 80834043 80836571 - MGP_BALBcJ_P0078233 Dok1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078234.1 MGP_BALBcJ_G0030888.1 mouse_genomes_project 6 80834953 80835664 - MGP_BALBcJ_P0078234 Dok1 protein_coding protein_coding MGP_BALBcJ_T0077171.1 MGP_BALBcJ_G0030611.1 mouse_genomes_project 6 38404888 38433576 - MGP_BALBcJ_P0077171 protein_coding protein_coding MGP_BALBcJ_T0008714.1 MGP_BALBcJ_G0007044.1 mouse_genomes_project 6 127016695 127017309 - Gm44066 lincRNA lincRNA MGP_BALBcJ_T0002071.1 MGP_BALBcJ_G0001984.1 mouse_genomes_project 6 88281697 88284809 + TEC TEC MGP_BALBcJ_T0076493.1 MGP_BALBcJ_G0030468.1 mouse_genomes_project 6 19639351 19818478 + MGP_BALBcJ_P0076493 Ptprz1 protein_coding protein_coding MGP_BALBcJ_T0076494.1 MGP_BALBcJ_G0030468.1 mouse_genomes_project 6 19640137 19769454 + MGP_BALBcJ_P0076494 Ptprz1 protein_coding protein_coding MGP_BALBcJ_T0076495.1 MGP_BALBcJ_G0030468.1 mouse_genomes_project 6 19640192 19818179 + MGP_BALBcJ_P0076495 Ptprz1 protein_coding protein_coding MGP_BALBcJ_T0076496.1 MGP_BALBcJ_G0030468.1 mouse_genomes_project 6 19736976 19737411 + Ptprz1 protein_coding retained_intron MGP_BALBcJ_T0076497.1 MGP_BALBcJ_G0030468.1 mouse_genomes_project 6 19750780 19764173 + Ptprz1 protein_coding retained_intron MGP_BALBcJ_T0076498.1 MGP_BALBcJ_G0030468.1 mouse_genomes_project 6 19813826 19817058 + Ptprz1 protein_coding retained_intron MGP_BALBcJ_T0078794.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86775361 86776524 - Podxl2 protein_coding processed_transcript MGP_BALBcJ_T0078795.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86775570 86808403 - MGP_BALBcJ_P0078795 Podxl2 protein_coding protein_coding MGP_BALBcJ_T0078796.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86776341 86778732 - Podxl2 protein_coding retained_intron MGP_BALBcJ_T0078797.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86776979 86782184 - Podxl2 protein_coding processed_transcript MGP_BALBcJ_T0078798.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86779774 86781650 - Podxl2 protein_coding retained_intron MGP_BALBcJ_T0078799.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86782485 86808162 - MGP_BALBcJ_P0078799 Podxl2 protein_coding protein_coding MGP_BALBcJ_T0078800.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86782485 86808220 - MGP_BALBcJ_P0078800 Podxl2 protein_coding protein_coding MGP_BALBcJ_T0078801.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86782620 86798695 - Podxl2 protein_coding processed_transcript MGP_BALBcJ_T0078802.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86797704 86808413 - Podxl2 protein_coding retained_intron MGP_BALBcJ_T0078803.1 MGP_BALBcJ_G0030994.1 mouse_genomes_project 6 86798239 86807801 - Podxl2 protein_coding retained_intron MGP_BALBcJ_T0077845.1 MGP_BALBcJ_G0030800.1 mouse_genomes_project 6 56590620 56593784 + MGP_BALBcJ_P0077845 Tigd2 protein_coding protein_coding MGP_BALBcJ_T0101296.1 MGP_BALBcJ_G0039332.1 mouse_genomes_project 6 122800297 122800569 + Gm23547 snoRNA snoRNA MGP_BALBcJ_T0076578.1 MGP_BALBcJ_G0030492.1 mouse_genomes_project 6 25213509 25224825 + MGP_BALBcJ_P0076578 Fscn3 protein_coding protein_coding MGP_BALBcJ_T0076579.1 MGP_BALBcJ_G0030492.1 mouse_genomes_project 6 25220239 25221837 + Fscn3 protein_coding processed_transcript MGP_BALBcJ_T0078458.1 MGP_BALBcJ_G0030927.1 mouse_genomes_project 6 82971544 82978940 - MGP_BALBcJ_P0078458 Spr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078459.1 MGP_BALBcJ_G0030927.1 mouse_genomes_project 6 82975062 82978940 - MGP_BALBcJ_P0078459 Spr protein_coding protein_coding MGP_BALBcJ_T0078460.1 MGP_BALBcJ_G0030927.1 mouse_genomes_project 6 82975071 82978930 - MGP_BALBcJ_P0078460 Spr protein_coding protein_coding MGP_BALBcJ_T0078461.1 MGP_BALBcJ_G0030927.1 mouse_genomes_project 6 82975384 82978936 - MGP_BALBcJ_P0078461 Spr protein_coding protein_coding MGP_BALBcJ_T0011631.1 MGP_BALBcJ_G0009756.1 mouse_genomes_project 6 49460798 49461176 + Gm27985 misc_RNA misc_RNA MGP_BALBcJ_T0000194.1 MGP_BALBcJ_G0000146.1 mouse_genomes_project 6 68036815 68037393 - MGP_BALBcJ_P0000194 Igkv8-21 IG_V_gene IG_V_gene MGP_BALBcJ_T0015333.1 MGP_BALBcJ_G0013430.1 mouse_genomes_project 6 51388406 51388784 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004896.1 MGP_BALBcJ_G0004206.1 mouse_genomes_project 6 26305678 26307652 + Gm26627 antisense antisense MGP_BALBcJ_T0098997.1 MGP_BALBcJ_G0037040.1 mouse_genomes_project 6 88780932 88781512 - Gm44105 sense_intronic sense_intronic MGP_BALBcJ_T0078988.1 MGP_BALBcJ_G0031036.1 mouse_genomes_project 6 90194312 90209548 - MGP_BALBcJ_P0078988 Mrps25 protein_coding protein_coding MGP_BALBcJ_T0078989.1 MGP_BALBcJ_G0031036.1 mouse_genomes_project 6 90200355 90201420 - Mrps25 protein_coding retained_intron MGP_BALBcJ_T0078990.1 MGP_BALBcJ_G0031036.1 mouse_genomes_project 6 90203829 90209486 - Mrps25 protein_coding retained_intron MGP_BALBcJ_T0018255.1 MGP_BALBcJ_G0015580.1 mouse_genomes_project 6 81261328 81267869 + B230319C09Rik processed_transcript antisense MGP_BALBcJ_T0018256.1 MGP_BALBcJ_G0015580.1 mouse_genomes_project 6 81261383 81264925 + B230319C09Rik processed_transcript processed_transcript MGP_BALBcJ_T0018257.1 MGP_BALBcJ_G0015580.1 mouse_genomes_project 6 81261385 81262214 + B230319C09Rik processed_transcript processed_transcript MGP_BALBcJ_T0008705.1 MGP_BALBcJ_G0007035.1 mouse_genomes_project 6 124369951 124411817 - Gm10415 lincRNA lincRNA MGP_BALBcJ_T0004984.1 MGP_BALBcJ_G0004270.1 mouse_genomes_project 6 84282265 84285013 - Gm44941 antisense antisense MGP_BALBcJ_T0015220.1 MGP_BALBcJ_G0013317.1 mouse_genomes_project 6 5857843 5858156 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077688.1 MGP_BALBcJ_G0030748.1 mouse_genomes_project 6 52212518 52223198 - MGP_BALBcJ_P0077688 Ggct protein_coding protein_coding MGP_BALBcJ_T0077689.1 MGP_BALBcJ_G0030748.1 mouse_genomes_project 6 52215611 52222955 - Ggct protein_coding processed_transcript MGP_BALBcJ_T0077690.1 MGP_BALBcJ_G0030748.1 mouse_genomes_project 6 52215895 52223109 - MGP_BALBcJ_P0077690 Ggct protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077691.1 MGP_BALBcJ_G0030748.1 mouse_genomes_project 6 52215919 52223111 - MGP_BALBcJ_P0077691 Ggct protein_coding protein_coding MGP_BALBcJ_T0077692.1 MGP_BALBcJ_G0030748.1 mouse_genomes_project 6 52216444 52223111 - Ggct protein_coding retained_intron MGP_BALBcJ_T0077693.1 MGP_BALBcJ_G0030748.1 mouse_genomes_project 6 52219385 52222872 - Ggct protein_coding retained_intron MGP_BALBcJ_T0008512.1 MGP_BALBcJ_G0006889.1 mouse_genomes_project 6 27865178 27865582 - Gm27019 lincRNA lincRNA MGP_BALBcJ_T0008607.1 MGP_BALBcJ_G0006956.1 mouse_genomes_project 6 69082116 69082766 - Gm44110 lincRNA lincRNA MGP_BALBcJ_T0078966.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89901599 89908547 + Ccdc174 protein_coding retained_intron MGP_BALBcJ_T0078967.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89901599 89923750 + MGP_BALBcJ_P0078967 Ccdc174 protein_coding protein_coding MGP_BALBcJ_T0078968.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89901599 89923750 + MGP_BALBcJ_P0078968 Ccdc174 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078969.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89901618 89904072 + Ccdc174 protein_coding retained_intron MGP_BALBcJ_T0078970.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89901621 89911876 + Ccdc174 protein_coding retained_intron MGP_BALBcJ_T0078971.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89916251 89919198 + Ccdc174 protein_coding retained_intron MGP_BALBcJ_T0078972.1 MGP_BALBcJ_G0031032.1 mouse_genomes_project 6 89916708 89919244 + Ccdc174 protein_coding retained_intron MGP_BALBcJ_T0076248.1 MGP_BALBcJ_G0030423.1 mouse_genomes_project 6 3602221 3606496 - MGP_BALBcJ_P0076248 Dlx5 protein_coding protein_coding MGP_BALBcJ_T0076249.1 MGP_BALBcJ_G0030423.1 mouse_genomes_project 6 3602221 3606479 - MGP_BALBcJ_P0076249 Dlx5 protein_coding protein_coding MGP_BALBcJ_T0076250.1 MGP_BALBcJ_G0030423.1 mouse_genomes_project 6 3605100 3606493 - Dlx5 protein_coding retained_intron MGP_BALBcJ_T0002122.1 MGP_BALBcJ_G0002035.1 mouse_genomes_project 6 114168367 114172029 - TEC TEC MGP_BALBcJ_T0101279.1 MGP_BALBcJ_G0039315.1 mouse_genomes_project 6 95596859 95596989 - Gm25852 snoRNA snoRNA MGP_BALBcJ_T0010740.1 MGP_BALBcJ_G0008865.1 mouse_genomes_project 6 27864746 27864834 - Mir29a miRNA miRNA MGP_BALBcJ_T0077144.1 MGP_BALBcJ_G0030595.1 mouse_genomes_project 6 37514987 37515929 - MGP_BALBcJ_P0077144 Olfr461 protein_coding protein_coding MGP_BALBcJ_T0078345.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81167986 81177781 + MGP_BALBcJ_P0078345 Bola3 protein_coding protein_coding MGP_BALBcJ_T0078346.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81168055 81177756 + MGP_BALBcJ_P0078346 Bola3 protein_coding protein_coding MGP_BALBcJ_T0078347.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81168285 81179521 + MGP_BALBcJ_P0078347 Bola3 protein_coding protein_coding MGP_BALBcJ_T0078348.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81168330 81169240 + Bola3 protein_coding processed_transcript MGP_BALBcJ_T0078349.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81168359 81172038 + Bola3 protein_coding retained_intron MGP_BALBcJ_T0078350.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81169879 81172049 + Bola3 protein_coding retained_intron MGP_BALBcJ_T0078351.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81169879 81177801 + Bola3 protein_coding retained_intron MGP_BALBcJ_T0078352.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81170934 81177718 + Bola3 protein_coding processed_transcript MGP_BALBcJ_T0078353.1 MGP_BALBcJ_G0030909.1 mouse_genomes_project 6 81172153 81178632 + Bola3 protein_coding processed_transcript MGP_BALBcJ_T0080304.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125026234 125054252 + D6Wsu163e protein_coding retained_intron MGP_BALBcJ_T0080305.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125026238 125060546 + MGP_BALBcJ_P0080305 D6Wsu163e protein_coding protein_coding MGP_BALBcJ_T0080306.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125026243 125028969 + D6Wsu163e protein_coding retained_intron MGP_BALBcJ_T0080307.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125026247 125033835 + D6Wsu163e protein_coding retained_intron MGP_BALBcJ_T0080308.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125026301 125031158 + MGP_BALBcJ_P0080308 D6Wsu163e protein_coding protein_coding MGP_BALBcJ_T0080309.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125036629 125041432 + D6Wsu163e protein_coding retained_intron MGP_BALBcJ_T0080310.1 MGP_BALBcJ_G0031287.1 mouse_genomes_project 6 125059017 125060212 + D6Wsu163e protein_coding retained_intron MGP_BALBcJ_T0015515.1 MGP_BALBcJ_G0013612.1 mouse_genomes_project 6 110991159 110991330 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080411.1 MGP_BALBcJ_G0031312.1 mouse_genomes_project 6 126863754 126865718 - Klrb1 protein_coding processed_transcript MGP_BALBcJ_T0080412.1 MGP_BALBcJ_G0031312.1 mouse_genomes_project 6 126864368 126884931 - MGP_BALBcJ_P0080412 Klrb1 protein_coding protein_coding MGP_BALBcJ_T0004955.1 MGP_BALBcJ_G0004253.1 mouse_genomes_project 6 70097769 70099199 - Gm45051 antisense antisense MGP_BALBcJ_T0008468.1 MGP_BALBcJ_G0006862.1 mouse_genomes_project 6 1529002 1537539 - Gm20714 lincRNA lincRNA MGP_BALBcJ_T0008469.1 MGP_BALBcJ_G0006862.1 mouse_genomes_project 6 1529002 1529382 - Gm20714 lincRNA lincRNA MGP_BALBcJ_T0008470.1 MGP_BALBcJ_G0006862.1 mouse_genomes_project 6 1529004 1534700 - Gm20714 lincRNA lincRNA MGP_BALBcJ_T0079803.1 MGP_BALBcJ_G0031185.1 mouse_genomes_project 6 118402435 118407304 - MGP_BALBcJ_P0079803 Cecr6 protein_coding protein_coding MGP_BALBcJ_T0015533.1 MGP_BALBcJ_G0013630.1 mouse_genomes_project 6 114872578 114872987 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002056.1 MGP_BALBcJ_G0001969.1 mouse_genomes_project 6 85715538 85718672 - TEC TEC MGP_BALBcJ_T0015244.1 MGP_BALBcJ_G0013341.1 mouse_genomes_project 6 16046106 16048489 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015424.1 MGP_BALBcJ_G0013521.1 mouse_genomes_project 6 74085680 74086194 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078733.1 MGP_BALBcJ_G0030983.1 mouse_genomes_project 6 85910254 85911471 - MGP_BALBcJ_P0078733 H1fx protein_coding protein_coding MGP_BALBcJ_T0015557.1 MGP_BALBcJ_G0013654.1 mouse_genomes_project 6 120764193 120764438 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002648.1 MGP_BALBcJ_G0002534.1 mouse_genomes_project 6 38013775 38014431 + MGP_BALBcJ_P0002648 Trbv2 TR_V_gene TR_V_gene MGP_BALBcJ_T0015203.1 MGP_BALBcJ_G0013300.1 mouse_genomes_project 6 971558 971654 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015549.1 MGP_BALBcJ_G0013646.1 mouse_genomes_project 6 119628122 119628529 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008752.1 MGP_BALBcJ_G0007067.1 mouse_genomes_project 6 144098822 144104422 + 2010013B24Rik lincRNA lincRNA MGP_BALBcJ_T0001952.1 MGP_BALBcJ_G0001865.1 mouse_genomes_project 6 37862111 37863454 - TEC TEC MGP_BALBcJ_T0008633.1 MGP_BALBcJ_G0006977.1 mouse_genomes_project 6 84393631 84405037 - lincRNA lincRNA MGP_BALBcJ_T0008634.1 MGP_BALBcJ_G0006977.1 mouse_genomes_project 6 84393631 84405014 - lincRNA lincRNA MGP_BALBcJ_T0101936.1 MGP_BALBcJ_G0039804.1 mouse_genomes_project 6 60543381 60547044 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101937.1 MGP_BALBcJ_G0039804.1 mouse_genomes_project 6 60543731 60545135 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0077612.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49919001 49973335 + MGP_BALBcJ_P0077612 Tax1bp1 protein_coding protein_coding MGP_BALBcJ_T0077613.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49919022 49938780 + MGP_BALBcJ_P0077613 Tax1bp1 protein_coding protein_coding MGP_BALBcJ_T0077614.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49919035 49937102 + Tax1bp1 protein_coding retained_intron MGP_BALBcJ_T0077615.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49919491 49938814 + MGP_BALBcJ_P0077615 Tax1bp1 protein_coding protein_coding MGP_BALBcJ_T0077616.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49919622 49932858 + MGP_BALBcJ_P0077616 Tax1bp1 protein_coding protein_coding MGP_BALBcJ_T0077617.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49947016 49948944 + Tax1bp1 protein_coding processed_transcript MGP_BALBcJ_T0077618.1 MGP_BALBcJ_G0030734.1 mouse_genomes_project 6 49964102 49968835 + Tax1bp1 protein_coding retained_intron MGP_BALBcJ_T0000138.1 MGP_BALBcJ_G0000105.1 mouse_genomes_project 6 65522156 65522643 - MGP_BALBcJ_P0000138 Igkv9-123 IG_V_gene IG_V_gene MGP_BALBcJ_T0079668.1 MGP_BALBcJ_G0031168.1 mouse_genomes_project 6 116387872 116449144 - MGP_BALBcJ_P0079668 Ankrd26 protein_coding protein_coding MGP_BALBcJ_T0079669.1 MGP_BALBcJ_G0031168.1 mouse_genomes_project 6 116405217 116410262 - Ankrd26 protein_coding retained_intron MGP_BALBcJ_T0079670.1 MGP_BALBcJ_G0031168.1 mouse_genomes_project 6 116429841 116436014 - Ankrd26 protein_coding retained_intron MGP_BALBcJ_T0001950.1 MGP_BALBcJ_G0001863.1 mouse_genomes_project 6 37059432 37062092 + TEC TEC MGP_BALBcJ_T0077093.1 MGP_BALBcJ_G0030582.1 mouse_genomes_project 6 36527795 36542535 + MGP_BALBcJ_P0077093 Adck2 protein_coding protein_coding MGP_BALBcJ_T0077094.1 MGP_BALBcJ_G0030582.1 mouse_genomes_project 6 36527881 36537836 + MGP_BALBcJ_P0077094 Adck2 protein_coding protein_coding MGP_BALBcJ_T0077095.1 MGP_BALBcJ_G0030582.1 mouse_genomes_project 6 36527886 36541518 + MGP_BALBcJ_P0077095 Adck2 protein_coding protein_coding MGP_BALBcJ_T0077096.1 MGP_BALBcJ_G0030582.1 mouse_genomes_project 6 36528906 36533893 + Adck2 protein_coding retained_intron MGP_BALBcJ_T0077097.1 MGP_BALBcJ_G0030582.1 mouse_genomes_project 6 36530315 36535935 + MGP_BALBcJ_P0077097 Adck2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077098.1 MGP_BALBcJ_G0030582.1 mouse_genomes_project 6 36537718 36539704 + Adck2 protein_coding retained_intron MGP_BALBcJ_T0078493.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83312813 83329775 + MGP_BALBcJ_P0078493 Cct7 protein_coding protein_coding MGP_BALBcJ_T0078494.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83313318 83317202 + Cct7 protein_coding retained_intron MGP_BALBcJ_T0078495.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83313351 83329582 + MGP_BALBcJ_P0078495 Cct7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078496.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83313391 83329582 + MGP_BALBcJ_P0078496 Cct7 protein_coding protein_coding MGP_BALBcJ_T0078497.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83322037 83326210 + Cct7 protein_coding retained_intron MGP_BALBcJ_T0078498.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83323070 83327237 + Cct7 protein_coding retained_intron MGP_BALBcJ_T0078499.1 MGP_BALBcJ_G0030934.1 mouse_genomes_project 6 83323451 83327388 + MGP_BALBcJ_P0078499 Cct7 protein_coding protein_coding MGP_BALBcJ_T0004976.1 MGP_BALBcJ_G0004264.1 mouse_genomes_project 6 81594523 81595633 - 1700124L16Rik antisense antisense MGP_BALBcJ_T0004977.1 MGP_BALBcJ_G0004264.1 mouse_genomes_project 6 81594523 81595276 - 1700124L16Rik antisense antisense MGP_BALBcJ_T0004978.1 MGP_BALBcJ_G0004264.1 mouse_genomes_project 6 81594523 81595610 - 1700124L16Rik antisense antisense MGP_BALBcJ_T0008667.1 MGP_BALBcJ_G0007001.1 mouse_genomes_project 6 98028783 98055679 - Gm44290 lincRNA lincRNA MGP_BALBcJ_T0011638.1 MGP_BALBcJ_G0009763.1 mouse_genomes_project 6 81538453 81538647 + Gm27893 misc_RNA misc_RNA MGP_BALBcJ_T0015370.1 MGP_BALBcJ_G0013467.1 mouse_genomes_project 6 63224211 63224598 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079652.1 MGP_BALBcJ_G0031163.1 mouse_genomes_project 6 115997539 116020631 - Csgalnact2 protein_coding retained_intron MGP_BALBcJ_T0079653.1 MGP_BALBcJ_G0031163.1 mouse_genomes_project 6 115997539 116031396 - MGP_BALBcJ_P0079653 Csgalnact2 protein_coding protein_coding MGP_BALBcJ_T0079654.1 MGP_BALBcJ_G0031163.1 mouse_genomes_project 6 115999423 116017417 - MGP_BALBcJ_P0079654 Csgalnact2 protein_coding protein_coding MGP_BALBcJ_T0080372.1 MGP_BALBcJ_G0031303.1 mouse_genomes_project 6 126517291 126526204 + MGP_BALBcJ_P0080372 protein_coding protein_coding MGP_BALBcJ_T0080373.1 MGP_BALBcJ_G0031303.1 mouse_genomes_project 6 126517303 126526097 + MGP_BALBcJ_P0080373 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080374.1 MGP_BALBcJ_G0031303.1 mouse_genomes_project 6 126517765 126526922 + MGP_BALBcJ_P0080374 protein_coding protein_coding MGP_BALBcJ_T0080375.1 MGP_BALBcJ_G0031303.1 mouse_genomes_project 6 126517965 126526922 + MGP_BALBcJ_P0080375 protein_coding protein_coding MGP_BALBcJ_T0080376.1 MGP_BALBcJ_G0031303.1 mouse_genomes_project 6 126518043 126526922 + protein_coding retained_intron MGP_BALBcJ_T0080377.1 MGP_BALBcJ_G0031303.1 mouse_genomes_project 6 126518288 126534390 + MGP_BALBcJ_P0080377 protein_coding non_stop_decay MGP_BALBcJ_T0015464.1 MGP_BALBcJ_G0013561.1 mouse_genomes_project 6 90309638 90310114 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002113.1 MGP_BALBcJ_G0002026.1 mouse_genomes_project 6 110313426 110315949 + TEC TEC MGP_BALBcJ_T0077722.1 MGP_BALBcJ_G0030756.1 mouse_genomes_project 6 52915828 52919270 - MGP_BALBcJ_P0077722 Neurod6 protein_coding protein_coding MGP_BALBcJ_T0001920.1 MGP_BALBcJ_G0001833.1 mouse_genomes_project 6 12547129 12548820 + TEC TEC MGP_BALBcJ_T0011612.1 MGP_BALBcJ_G0009737.1 mouse_genomes_project 6 16063145 16063403 - Gm24213 misc_RNA misc_RNA MGP_BALBcJ_T0080698.1 MGP_BALBcJ_G0031412.1 mouse_genomes_project 6 135636923 135640336 - MGP_BALBcJ_P0080698 Mgp protein_coding protein_coding MGP_BALBcJ_T0080699.1 MGP_BALBcJ_G0031412.1 mouse_genomes_project 6 135638199 135640294 - Mgp protein_coding retained_intron MGP_BALBcJ_T0000276.1 MGP_BALBcJ_G0000217.1 mouse_genomes_project 6 65657948 65658408 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015374.1 MGP_BALBcJ_G0013471.1 mouse_genomes_project 6 63719459 63722922 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079547.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113925825 114048059 - MGP_BALBcJ_P0079547 Tmcc1 protein_coding protein_coding MGP_BALBcJ_T0079548.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113928379 114015835 - MGP_BALBcJ_P0079548 Tmcc1 protein_coding protein_coding MGP_BALBcJ_T0079549.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113928553 114043817 - MGP_BALBcJ_P0079549 Tmcc1 protein_coding protein_coding MGP_BALBcJ_T0079550.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113928827 114043927 - MGP_BALBcJ_P0079550 Tmcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079551.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113929205 113981159 - MGP_BALBcJ_P0079551 Tmcc1 protein_coding protein_coding MGP_BALBcJ_T0079552.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113950979 114043400 - MGP_BALBcJ_P0079552 Tmcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079553.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 113961047 113965616 - Tmcc1 protein_coding retained_intron MGP_BALBcJ_T0079554.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 114012894 114018370 - Tmcc1 protein_coding retained_intron MGP_BALBcJ_T0079555.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 114041171 114080568 - MGP_BALBcJ_P0079555 Tmcc1 protein_coding protein_coding MGP_BALBcJ_T0079556.1 MGP_BALBcJ_G0031142.1 mouse_genomes_project 6 114043016 114044619 - Tmcc1 protein_coding retained_intron MGP_BALBcJ_T0015581.1 MGP_BALBcJ_G0013678.1 mouse_genomes_project 6 126405689 126406086 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078388.1 MGP_BALBcJ_G0030918.1 mouse_genomes_project 6 81595411 81601094 + MGP_BALBcJ_P0078388 Ankrd53 protein_coding protein_coding MGP_BALBcJ_T0078389.1 MGP_BALBcJ_G0030918.1 mouse_genomes_project 6 81595453 81600805 + MGP_BALBcJ_P0078389 Ankrd53 protein_coding protein_coding MGP_BALBcJ_T0080323.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125530643 125559983 + MGP_BALBcJ_P0080323 Parp11 protein_coding protein_coding MGP_BALBcJ_T0080324.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125535003 125553877 + Parp11 protein_coding retained_intron MGP_BALBcJ_T0080325.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125535031 125559934 + MGP_BALBcJ_P0080325 Parp11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080326.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125535046 125578097 + MGP_BALBcJ_P0080326 Parp11 protein_coding protein_coding MGP_BALBcJ_T0080327.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125535049 125552775 + Parp11 protein_coding retained_intron MGP_BALBcJ_T0080328.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125535058 125560905 + MGP_BALBcJ_P0080328 Parp11 protein_coding protein_coding MGP_BALBcJ_T0080329.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125553375 125555135 + Parp11 protein_coding retained_intron MGP_BALBcJ_T0080330.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125555993 125560796 + Parp11 protein_coding retained_intron MGP_BALBcJ_T0080331.1 MGP_BALBcJ_G0031292.1 mouse_genomes_project 6 125559504 125573897 + Parp11 protein_coding retained_intron MGP_BALBcJ_T0000179.1 MGP_BALBcJ_G0000136.1 mouse_genomes_project 6 67704057 67704570 - MGP_BALBcJ_P0000179 Igkv18-36 IG_V_gene IG_V_gene MGP_BALBcJ_T0000180.1 MGP_BALBcJ_G0000136.1 mouse_genomes_project 6 67704057 67704570 - MGP_BALBcJ_P0000180 Igkv18-36 IG_V_gene IG_V_gene MGP_BALBcJ_T0101285.1 MGP_BALBcJ_G0039321.1 mouse_genomes_project 6 114280613 114280743 - Gm23527 snoRNA snoRNA MGP_BALBcJ_T0077166.1 MGP_BALBcJ_G0030606.1 mouse_genomes_project 6 37994337 37999579 - MGP_BALBcJ_P0077166 2210010C04Rik protein_coding protein_coding MGP_BALBcJ_T0080518.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129634433 129643238 - MGP_BALBcJ_P0080518 Magohb protein_coding protein_coding MGP_BALBcJ_T0080519.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129634558 129635919 - Magohb protein_coding retained_intron MGP_BALBcJ_T0080520.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129634568 129643125 - MGP_BALBcJ_P0080520 Magohb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080521.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129634650 129642268 - MGP_BALBcJ_P0080521 Magohb protein_coding protein_coding MGP_BALBcJ_T0080522.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129634710 129639633 - Magohb protein_coding retained_intron MGP_BALBcJ_T0080523.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129634746 129643145 - MGP_BALBcJ_P0080523 Magohb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080524.1 MGP_BALBcJ_G0031350.1 mouse_genomes_project 6 129638184 129643145 - MGP_BALBcJ_P0080524 Magohb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080311.1 MGP_BALBcJ_G0031288.1 mouse_genomes_project 6 125099593 125112260 + MGP_BALBcJ_P0080311 Fgf6 protein_coding protein_coding MGP_BALBcJ_T0101275.1 MGP_BALBcJ_G0039311.1 mouse_genomes_project 6 91376099 91376230 - Gm25094 snoRNA snoRNA MGP_BALBcJ_T0002183.1 MGP_BALBcJ_G0002095.1 mouse_genomes_project 6 147587994 147589654 + TEC TEC MGP_BALBcJ_T0079091.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96973724 97319106 - MGP_BALBcJ_P0079091 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079092.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96973728 97489994 - MGP_BALBcJ_P0079092 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079093.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96973801 96978172 - Foxp1 protein_coding processed_transcript MGP_BALBcJ_T0079094.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96977575 97576666 - MGP_BALBcJ_P0079094 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079095.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079095 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079096.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97489994 - MGP_BALBcJ_P0079096 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079097.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079097 Foxp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079098.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97489994 - MGP_BALBcJ_P0079098 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079099.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079099 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079100.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079100 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079101.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079101 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079102.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079102 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079103.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97215239 - MGP_BALBcJ_P0079103 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079104.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978476 97076573 - MGP_BALBcJ_P0079104 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079105.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96978557 96983932 - Foxp1 protein_coding retained_intron MGP_BALBcJ_T0079106.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 96993926 97076627 - MGP_BALBcJ_P0079106 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079107.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97000593 97052022 - Foxp1 protein_coding retained_intron MGP_BALBcJ_T0079108.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97051541 97077256 - MGP_BALBcJ_P0079108 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079109.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97051734 97092367 - MGP_BALBcJ_P0079109 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079110.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97055026 97076580 - Foxp1 protein_coding processed_transcript MGP_BALBcJ_T0079111.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97058278 97148377 - MGP_BALBcJ_P0079111 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079112.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97058289 97092350 - MGP_BALBcJ_P0079112 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079113.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97064924 97076305 - MGP_BALBcJ_P0079113 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079114.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97124032 97301024 - MGP_BALBcJ_P0079114 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079115.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97204070 97319106 - Foxp1 protein_coding processed_transcript MGP_BALBcJ_T0079116.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97214160 97319123 - Foxp1 protein_coding retained_intron MGP_BALBcJ_T0079117.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97214160 97319123 - Foxp1 protein_coding retained_intron MGP_BALBcJ_T0079118.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97215149 97576831 - MGP_BALBcJ_P0079118 Foxp1 protein_coding protein_coding MGP_BALBcJ_T0079120.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97313017 97578311 - Foxp1 protein_coding processed_transcript MGP_BALBcJ_T0079121.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97360930 97491044 - Foxp1 protein_coding processed_transcript MGP_BALBcJ_T0079124.1 MGP_BALBcJ_G0031060.1 mouse_genomes_project 6 97489884 97578385 - Foxp1 protein_coding processed_transcript MGP_BALBcJ_T0008489.1 MGP_BALBcJ_G0006873.1 mouse_genomes_project 6 10093031 10095649 + 1700016P04Rik lincRNA lincRNA MGP_BALBcJ_T0077267.1 MGP_BALBcJ_G0030645.1 mouse_genomes_project 6 39776834 39777788 + MGP_BALBcJ_P0077267 Olfr452 protein_coding protein_coding MGP_BALBcJ_T0015548.1 MGP_BALBcJ_G0013645.1 mouse_genomes_project 6 119555809 119556559 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000306.1 MGP_BALBcJ_G0000247.1 mouse_genomes_project 6 67392801 67393196 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0001965.1 MGP_BALBcJ_G0001878.1 mouse_genomes_project 6 42479695 42481857 + TEC TEC MGP_BALBcJ_T0010771.1 MGP_BALBcJ_G0008896.1 mouse_genomes_project 6 92666842 92666894 - Mir7041 miRNA miRNA MGP_BALBcJ_T0015457.1 MGP_BALBcJ_G0013554.1 mouse_genomes_project 6 85868345 85868759 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015649.1 MGP_BALBcJ_G0013746.1 mouse_genomes_project 6 145549144 145550243 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080600.1 MGP_BALBcJ_G0031390.1 mouse_genomes_project 6 133479696 133508261 + MGP_BALBcJ_P0080600 Crebl2 protein_coding protein_coding MGP_BALBcJ_T0080601.1 MGP_BALBcJ_G0031390.1 mouse_genomes_project 6 133479770 133498916 + Crebl2 protein_coding retained_intron MGP_BALBcJ_T0080602.1 MGP_BALBcJ_G0031390.1 mouse_genomes_project 6 133479797 133505496 + MGP_BALBcJ_P0080602 Crebl2 protein_coding protein_coding MGP_BALBcJ_T0080603.1 MGP_BALBcJ_G0031390.1 mouse_genomes_project 6 133500498 133503924 + Crebl2 protein_coding retained_intron MGP_BALBcJ_T0078849.1 MGP_BALBcJ_G0031004.1 mouse_genomes_project 6 87832384 87833453 - MGP_BALBcJ_P0078849 Vmn1r43 protein_coding protein_coding MGP_BALBcJ_T0078865.1 MGP_BALBcJ_G0031014.1 mouse_genomes_project 6 88293514 88307606 - MGP_BALBcJ_P0078865 Chst13 protein_coding protein_coding MGP_BALBcJ_T0098635.1 MGP_BALBcJ_G0036689.1 mouse_genomes_project 6 130985996 130986117 + n-R5s167 rRNA rRNA MGP_BALBcJ_T0076889.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31467997 31648245 + MGP_BALBcJ_P0076889 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076890.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31468009 31626384 + MGP_BALBcJ_P0076890 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076891.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31468041 31559809 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0076892.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31468041 31615009 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0076893.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31468061 31648257 + MGP_BALBcJ_P0076893 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076894.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31468062 31648257 + MGP_BALBcJ_P0076894 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076895.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31468117 31534245 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0076896.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31582233 31648264 + MGP_BALBcJ_P0076896 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076897.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31582281 31583545 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0076898.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31582281 31648259 + MGP_BALBcJ_P0076898 Cald1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076899.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31582425 31646485 + MGP_BALBcJ_P0076899 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076900.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31618760 31628693 + MGP_BALBcJ_P0076900 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076901.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31618789 31628603 + MGP_BALBcJ_P0076901 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076902.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31618815 31628603 + MGP_BALBcJ_P0076902 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076903.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31619194 31634914 + MGP_BALBcJ_P0076903 Cald1 protein_coding protein_coding MGP_BALBcJ_T0076904.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31620581 31626303 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0076905.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31635649 31639621 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0076906.1 MGP_BALBcJ_G0030544.1 mouse_genomes_project 6 31637745 31639428 + Cald1 protein_coding retained_intron MGP_BALBcJ_T0079292.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111328747 111346898 + MGP_BALBcJ_P0079292 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079293.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111328776 111346743 + MGP_BALBcJ_P0079293 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079294.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111328802 111346901 + MGP_BALBcJ_P0079294 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079295.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111328802 111346762 + MGP_BALBcJ_P0079295 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079296.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111328834 111346882 + MGP_BALBcJ_P0079296 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079297.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111328923 111346664 + MGP_BALBcJ_P0079297 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079298.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111329039 111346765 + MGP_BALBcJ_P0079298 Brpf1 protein_coding protein_coding MGP_BALBcJ_T0079299.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111338958 111340254 + Brpf1 protein_coding retained_intron MGP_BALBcJ_T0079300.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111342180 111344347 + Brpf1 protein_coding retained_intron MGP_BALBcJ_T0079301.1 MGP_BALBcJ_G0031096.1 mouse_genomes_project 6 111342338 111346743 + Brpf1 protein_coding retained_intron MGP_BALBcJ_T0015602.1 MGP_BALBcJ_G0013699.1 mouse_genomes_project 6 129465795 129467884 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010790.1 MGP_BALBcJ_G0008915.1 mouse_genomes_project 6 120893821 120893882 + Mir7231 miRNA miRNA MGP_BALBcJ_T0080378.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126527433 126542437 - MGP_BALBcJ_P0080378 Itfg2 protein_coding protein_coding MGP_BALBcJ_T0080379.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126527487 126528377 - MGP_BALBcJ_P0080379 Itfg2 protein_coding protein_coding MGP_BALBcJ_T0080380.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126527522 126542424 - MGP_BALBcJ_P0080380 Itfg2 protein_coding protein_coding MGP_BALBcJ_T0080381.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126528208 126542375 - MGP_BALBcJ_P0080381 Itfg2 protein_coding protein_coding MGP_BALBcJ_T0080382.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126528254 126528682 - Itfg2 protein_coding retained_intron MGP_BALBcJ_T0080383.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126529582 126532338 - Itfg2 protein_coding retained_intron MGP_BALBcJ_T0080384.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126531003 126542418 - MGP_BALBcJ_P0080384 Itfg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080385.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126531636 126542419 - MGP_BALBcJ_P0080385 Itfg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080386.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126533592 126542436 - Itfg2 protein_coding retained_intron MGP_BALBcJ_T0080387.1 MGP_BALBcJ_G0031304.1 mouse_genomes_project 6 126540467 126542424 - Itfg2 protein_coding retained_intron MGP_BALBcJ_T0015398.1 MGP_BALBcJ_G0013495.1 mouse_genomes_project 6 65730141 65730970 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100002.1 MGP_BALBcJ_G0038038.1 mouse_genomes_project 6 39819127 39819233 + Gm23982 snRNA snRNA MGP_BALBcJ_T0015269.1 MGP_BALBcJ_G0013366.1 mouse_genomes_project 6 31683281 31683478 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004995.1 MGP_BALBcJ_G0004273.1 mouse_genomes_project 6 85199733 85201740 + Gm44418 antisense antisense MGP_BALBcJ_T0077767.1 MGP_BALBcJ_G0030766.1 mouse_genomes_project 6 54232965 54234021 + MGP_BALBcJ_P0077767 Vmn1r5 protein_coding protein_coding MGP_BALBcJ_T0005092.1 MGP_BALBcJ_G0004347.1 mouse_genomes_project 6 141395131 141406987 + 5330439B14Rik antisense antisense MGP_BALBcJ_T0079309.1 MGP_BALBcJ_G0031098.1 mouse_genomes_project 6 111356081 111365901 - MGP_BALBcJ_P0079309 Camk1 protein_coding protein_coding MGP_BALBcJ_T0079310.1 MGP_BALBcJ_G0031098.1 mouse_genomes_project 6 111356085 111358579 - Camk1 protein_coding retained_intron MGP_BALBcJ_T0079311.1 MGP_BALBcJ_G0031098.1 mouse_genomes_project 6 111356094 111365821 - Camk1 protein_coding retained_intron MGP_BALBcJ_T0079312.1 MGP_BALBcJ_G0031098.1 mouse_genomes_project 6 111358873 111362840 - Camk1 protein_coding retained_intron MGP_BALBcJ_T0079313.1 MGP_BALBcJ_G0031098.1 mouse_genomes_project 6 111360045 111365895 - MGP_BALBcJ_P0079313 Camk1 protein_coding protein_coding MGP_BALBcJ_T0079314.1 MGP_BALBcJ_G0031098.1 mouse_genomes_project 6 111362825 111365880 - Camk1 protein_coding retained_intron MGP_BALBcJ_T0005071.1 MGP_BALBcJ_G0004330.1 mouse_genomes_project 6 126499930 126517736 - Gm15862 antisense antisense MGP_BALBcJ_T0079720.1 MGP_BALBcJ_G0031175.1 mouse_genomes_project 6 117374884 117377872 + MGP_BALBcJ_P0079720 Fbxl14 protein_coding protein_coding MGP_BALBcJ_T0008741.1 MGP_BALBcJ_G0007060.1 mouse_genomes_project 6 141755991 141759005 + A930014E10Rik lincRNA lincRNA MGP_BALBcJ_T0077458.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45966842 45968254 + MGP_BALBcJ_P0077458 Tmem176a protein_coding protein_coding MGP_BALBcJ_T0077459.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45967435 45971793 + MGP_BALBcJ_P0077459 Tmem176a protein_coding protein_coding MGP_BALBcJ_T0077460.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45967445 45973404 + MGP_BALBcJ_P0077460 Tmem176a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077461.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45967471 45971285 + Tmem176a protein_coding retained_intron MGP_BALBcJ_T0077462.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45967506 45971289 + MGP_BALBcJ_P0077462 Tmem176a protein_coding protein_coding MGP_BALBcJ_T0077463.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45967693 45970699 + MGP_BALBcJ_P0077463 Tmem176a protein_coding protein_coding MGP_BALBcJ_T0077464.1 MGP_BALBcJ_G0030695.1 mouse_genomes_project 6 45968512 45969516 + MGP_BALBcJ_P0077464 Tmem176a protein_coding protein_coding MGP_BALBcJ_T0008640.1 MGP_BALBcJ_G0006983.1 mouse_genomes_project 6 85594119 85609209 - 1810020O05Rik lincRNA lincRNA MGP_BALBcJ_T0001985.1 MGP_BALBcJ_G0001898.1 mouse_genomes_project 6 50875610 50877810 + TEC TEC MGP_BALBcJ_T0015623.1 MGP_BALBcJ_G0013720.1 mouse_genomes_project 6 132335703 132336032 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000307.1 MGP_BALBcJ_G0000248.1 mouse_genomes_project 6 67427367 67427845 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0077778.1 MGP_BALBcJ_G0030777.1 mouse_genomes_project 6 54637847 54638827 - MGP_BALBcJ_P0077778 Vmn1r17 protein_coding protein_coding MGP_BALBcJ_T0008630.1 MGP_BALBcJ_G0006974.1 mouse_genomes_project 6 82259058 82269953 - Gm10445 lincRNA lincRNA MGP_BALBcJ_T0008488.1 MGP_BALBcJ_G0006872.1 mouse_genomes_project 6 9298490 9335647 + lincRNA lincRNA MGP_BALBcJ_T0018188.1 MGP_BALBcJ_G0015562.1 mouse_genomes_project 6 5208643 5231094 - A430035B10Rik processed_transcript processed_transcript MGP_BALBcJ_T0018189.1 MGP_BALBcJ_G0015562.1 mouse_genomes_project 6 5209781 5218643 - A430035B10Rik processed_transcript processed_transcript MGP_BALBcJ_T0018190.1 MGP_BALBcJ_G0015562.1 mouse_genomes_project 6 5210888 5229742 - A430035B10Rik processed_transcript processed_transcript MGP_BALBcJ_T0018191.1 MGP_BALBcJ_G0015562.1 mouse_genomes_project 6 5212270 5229685 - A430035B10Rik processed_transcript retained_intron MGP_BALBcJ_T0018192.1 MGP_BALBcJ_G0015562.1 mouse_genomes_project 6 5227722 5229802 - A430035B10Rik processed_transcript processed_transcript MGP_BALBcJ_T0004925.1 MGP_BALBcJ_G0004231.1 mouse_genomes_project 6 45734350 45742770 - Gm44119 antisense antisense MGP_BALBcJ_T0081084.1 MGP_BALBcJ_G0031483.1 mouse_genomes_project 6 146249013 146284370 + MGP_BALBcJ_P0081084 Ccdc91 protein_coding protein_coding MGP_BALBcJ_T0081085.1 MGP_BALBcJ_G0031483.1 mouse_genomes_project 6 146249056 146405790 + MGP_BALBcJ_P0081085 Ccdc91 protein_coding protein_coding MGP_BALBcJ_T0081086.1 MGP_BALBcJ_G0031483.1 mouse_genomes_project 6 146249176 146309980 + MGP_BALBcJ_P0081086 Ccdc91 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081087.1 MGP_BALBcJ_G0031483.1 mouse_genomes_project 6 146307282 146318735 + Ccdc91 protein_coding processed_transcript MGP_BALBcJ_T0015285.1 MGP_BALBcJ_G0013382.1 mouse_genomes_project 6 38222675 38223119 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100019.1 MGP_BALBcJ_G0038055.1 mouse_genomes_project 6 95621461 95621624 - Gm23510 snRNA snRNA MGP_BALBcJ_T0076655.1 MGP_BALBcJ_G0030506.1 mouse_genomes_project 6 26231019 26236658 + Flnc protein_coding retained_intron MGP_BALBcJ_T0076656.1 MGP_BALBcJ_G0030506.1 mouse_genomes_project 6 26231039 26259754 + MGP_BALBcJ_P0076656 Flnc protein_coding protein_coding MGP_BALBcJ_T0076657.1 MGP_BALBcJ_G0030506.1 mouse_genomes_project 6 26231039 26259754 + MGP_BALBcJ_P0076657 Flnc protein_coding protein_coding MGP_BALBcJ_T0001989.1 MGP_BALBcJ_G0001902.1 mouse_genomes_project 6 54147669 54148341 - TEC TEC MGP_BALBcJ_T0000315.1 MGP_BALBcJ_G0000256.1 mouse_genomes_project 6 68215269 68215569 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0078315.1 MGP_BALBcJ_G0030904.1 mouse_genomes_project 6 80968962 80975460 + MGP_BALBcJ_P0078315 1700003E16Rik protein_coding protein_coding MGP_BALBcJ_T0078316.1 MGP_BALBcJ_G0030904.1 mouse_genomes_project 6 80969059 80975406 + MGP_BALBcJ_P0078316 1700003E16Rik protein_coding protein_coding MGP_BALBcJ_T0002563.1 MGP_BALBcJ_G0002465.1 mouse_genomes_project 6 38515985 38516038 + MGP_BALBcJ_P0002563 Trbj1-6 TR_J_gene TR_J_gene MGP_BALBcJ_T0101263.1 MGP_BALBcJ_G0039299.1 mouse_genomes_project 6 65354191 65354327 - Gm24911 snoRNA snoRNA MGP_BALBcJ_T0005069.1 MGP_BALBcJ_G0004328.1 mouse_genomes_project 6 126023688 126033834 - Gm15870 antisense antisense MGP_BALBcJ_T0015609.1 MGP_BALBcJ_G0013706.1 mouse_genomes_project 6 130433150 130433631 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002134.1 MGP_BALBcJ_G0002046.1 mouse_genomes_project 6 122802713 122803011 - TEC TEC MGP_BALBcJ_T0000155.1 MGP_BALBcJ_G0000118.1 mouse_genomes_project 6 66267812 66268282 + MGP_BALBcJ_P0000155 Igkv10-95 IG_V_gene IG_V_gene MGP_BALBcJ_T0000156.1 MGP_BALBcJ_G0000118.1 mouse_genomes_project 6 66267995 66268282 + MGP_BALBcJ_P0000156 Igkv10-95 IG_V_gene IG_V_gene MGP_BALBcJ_T0008495.1 MGP_BALBcJ_G0006878.1 mouse_genomes_project 6 13939525 13946984 + D830026I12Rik lincRNA lincRNA MGP_BALBcJ_T0008496.1 MGP_BALBcJ_G0006878.1 mouse_genomes_project 6 13939881 13947890 + D830026I12Rik lincRNA lincRNA MGP_BALBcJ_T0008497.1 MGP_BALBcJ_G0006878.1 mouse_genomes_project 6 13939896 13952358 + D830026I12Rik lincRNA lincRNA MGP_BALBcJ_T0005057.1 MGP_BALBcJ_G0004318.1 mouse_genomes_project 6 122817248 122828940 + antisense antisense MGP_BALBcJ_T0001904.1 MGP_BALBcJ_G0001817.1 mouse_genomes_project 6 1222183 1223975 + TEC TEC MGP_BALBcJ_T0079832.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118849916 118917918 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079833.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118849934 118897423 - MGP_BALBcJ_P0079833 Mical3 protein_coding unknown_likely_coding MGP_BALBcJ_T0079834.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118852989 118877133 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079835.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118853033 118853743 - Mical3 protein_coding retained_intron MGP_BALBcJ_T0079836.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118869189 118876221 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079837.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118876840 118917918 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079838.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118878509 118884644 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079839.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118912110 118937666 - MGP_BALBcJ_P0079839 Mical3 protein_coding protein_coding MGP_BALBcJ_T0079840.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118922006 118996342 - MGP_BALBcJ_P0079840 Mical3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079841.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118922006 118996344 - MGP_BALBcJ_P0079841 Mical3 protein_coding protein_coding MGP_BALBcJ_T0079842.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118922007 118937681 - MGP_BALBcJ_P0079842 Mical3 protein_coding protein_coding MGP_BALBcJ_T0079843.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118931429 119031582 - Mical3 protein_coding retained_intron MGP_BALBcJ_T0079844.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118931429 118937703 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079845.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118937624 119052369 - MGP_BALBcJ_P0079845 Mical3 protein_coding protein_coding MGP_BALBcJ_T0079846.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118937803 118941177 - Mical3 protein_coding retained_intron MGP_BALBcJ_T0079847.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118940164 118940823 - Mical3 protein_coding processed_transcript MGP_BALBcJ_T0079848.1 MGP_BALBcJ_G0031192.1 mouse_genomes_project 6 118944353 118946178 - Mical3 protein_coding retained_intron MGP_BALBcJ_T0004897.1 MGP_BALBcJ_G0004207.1 mouse_genomes_project 6 27392742 27395625 - Gm13781 antisense antisense MGP_BALBcJ_T0077909.1 MGP_BALBcJ_G0030813.1 mouse_genomes_project 6 63422376 63423782 + MGP_BALBcJ_P0077909 4930544G11Rik protein_coding protein_coding MGP_BALBcJ_T0010766.1 MGP_BALBcJ_G0008891.1 mouse_genomes_project 6 83645486 83645581 - Mir6375 miRNA miRNA MGP_BALBcJ_T0077295.1 MGP_BALBcJ_G0030660.1 mouse_genomes_project 6 40379430 40385311 - MGP_BALBcJ_P0077295 Nobox protein_coding protein_coding MGP_BALBcJ_T0077296.1 MGP_BALBcJ_G0030660.1 mouse_genomes_project 6 40379456 40380892 - Nobox protein_coding processed_transcript MGP_BALBcJ_T0077297.1 MGP_BALBcJ_G0030660.1 mouse_genomes_project 6 40379654 40382993 - MGP_BALBcJ_P0077297 Nobox protein_coding protein_coding MGP_BALBcJ_T0005012.1 MGP_BALBcJ_G0004286.1 mouse_genomes_project 6 89148075 89148619 - Gm14573 antisense antisense MGP_BALBcJ_T0080990.1 MGP_BALBcJ_G0031464.1 mouse_genomes_project 6 144423149 144424688 + MGP_BALBcJ_P0080990 Tuba3a protein_coding protein_coding MGP_BALBcJ_T0076148.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 208182 309127 + MGP_BALBcJ_P0076148 Vps50 protein_coding protein_coding MGP_BALBcJ_T0076149.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 208204 306706 + MGP_BALBcJ_P0076149 Vps50 protein_coding protein_coding MGP_BALBcJ_T0076150.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 208222 308911 + MGP_BALBcJ_P0076150 Vps50 protein_coding protein_coding MGP_BALBcJ_T0076151.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 208226 231052 + Vps50 protein_coding retained_intron MGP_BALBcJ_T0076152.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 227716 243258 + Vps50 protein_coding processed_transcript MGP_BALBcJ_T0076153.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 269505 308911 + Vps50 protein_coding retained_intron MGP_BALBcJ_T0076154.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 281553 308911 + Vps50 protein_coding processed_transcript MGP_BALBcJ_T0076155.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 293627 298634 + Vps50 protein_coding retained_intron MGP_BALBcJ_T0076156.1 MGP_BALBcJ_G0030403.1 mouse_genomes_project 6 299594 305858 + Vps50 protein_coding processed_transcript MGP_BALBcJ_T0011599.1 MGP_BALBcJ_G0009724.1 mouse_genomes_project 6 3543791 3543998 + Gm27905 misc_RNA misc_RNA MGP_BALBcJ_T0077275.1 MGP_BALBcJ_G0030650.1 mouse_genomes_project 6 39912848 39913683 + MGP_BALBcJ_P0077275 protein_coding protein_coding MGP_BALBcJ_T0079281.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111303945 111327238 + Cpne9 protein_coding retained_intron MGP_BALBcJ_T0079282.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111303945 111327180 + MGP_BALBcJ_P0079282 Cpne9 protein_coding protein_coding MGP_BALBcJ_T0079283.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111303948 111326435 + MGP_BALBcJ_P0079283 Cpne9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079284.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111303973 111305068 + Cpne9 protein_coding retained_intron MGP_BALBcJ_T0079285.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111303974 111306907 + Cpne9 protein_coding retained_intron MGP_BALBcJ_T0079286.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111303977 111305146 + Cpne9 protein_coding retained_intron MGP_BALBcJ_T0079287.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111304002 111305608 + Cpne9 protein_coding processed_transcript MGP_BALBcJ_T0079288.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111304003 111306063 + Cpne9 protein_coding processed_transcript MGP_BALBcJ_T0079289.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111304112 111327184 + MGP_BALBcJ_P0079289 Cpne9 protein_coding unknown_likely_coding MGP_BALBcJ_T0079290.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111310112 111327182 + Cpne9 protein_coding retained_intron MGP_BALBcJ_T0079291.1 MGP_BALBcJ_G0031095.1 mouse_genomes_project 6 111315931 111323290 + Cpne9 protein_coding processed_transcript MGP_BALBcJ_T0015512.1 MGP_BALBcJ_G0013609.1 mouse_genomes_project 6 108754554 108754686 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102621.1 MGP_BALBcJ_G0040437.1 mouse_genomes_project 6 55520134 55521177 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002063.1 MGP_BALBcJ_G0001976.1 mouse_genomes_project 6 86148144 86148402 - TEC TEC MGP_BALBcJ_T0001966.1 MGP_BALBcJ_G0001879.1 mouse_genomes_project 6 42586369 42589598 + TEC TEC MGP_BALBcJ_T0078365.1 MGP_BALBcJ_G0030912.1 mouse_genomes_project 6 81333193 81355785 - MGP_BALBcJ_P0078365 Actg2 protein_coding protein_coding MGP_BALBcJ_T0078366.1 MGP_BALBcJ_G0030912.1 mouse_genomes_project 6 81333200 81347976 - MGP_BALBcJ_P0078366 Actg2 protein_coding protein_coding MGP_BALBcJ_T0078367.1 MGP_BALBcJ_G0030912.1 mouse_genomes_project 6 81339966 81346901 - Actg2 protein_coding processed_transcript MGP_BALBcJ_T0078368.1 MGP_BALBcJ_G0030912.1 mouse_genomes_project 6 81339966 81355743 - MGP_BALBcJ_P0078368 Actg2 protein_coding protein_coding MGP_BALBcJ_T0078369.1 MGP_BALBcJ_G0030912.1 mouse_genomes_project 6 81340107 81347476 - MGP_BALBcJ_P0078369 Actg2 protein_coding protein_coding MGP_BALBcJ_T0078370.1 MGP_BALBcJ_G0030912.1 mouse_genomes_project 6 81340883 81347796 - MGP_BALBcJ_P0078370 Actg2 protein_coding protein_coding MGP_BALBcJ_T0078933.1 MGP_BALBcJ_G0031026.1 mouse_genomes_project 6 89455746 89467242 - MGP_BALBcJ_P0078933 Chchd4 protein_coding protein_coding MGP_BALBcJ_T0078934.1 MGP_BALBcJ_G0031026.1 mouse_genomes_project 6 89465295 89467145 - Chchd4 protein_coding retained_intron MGP_BALBcJ_T0080556.1 MGP_BALBcJ_G0031373.1 mouse_genomes_project 6 131240883 131241820 - MGP_BALBcJ_P0080556 Tas2r125 protein_coding protein_coding MGP_BALBcJ_T0077540.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48639211 48651228 - MGP_BALBcJ_P0077540 Hnrnpa2b1 protein_coding protein_coding MGP_BALBcJ_T0077541.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48639400 48651181 - MGP_BALBcJ_P0077541 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077542.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48639403 48651179 - MGP_BALBcJ_P0077542 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077543.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48639403 48651179 - MGP_BALBcJ_P0077543 Hnrnpa2b1 protein_coding protein_coding MGP_BALBcJ_T0077544.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48639424 48641463 - Hnrnpa2b1 protein_coding retained_intron MGP_BALBcJ_T0077545.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48641039 48651160 - MGP_BALBcJ_P0077545 Hnrnpa2b1 protein_coding protein_coding MGP_BALBcJ_T0077546.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48641039 48651106 - MGP_BALBcJ_P0077546 Hnrnpa2b1 protein_coding protein_coding MGP_BALBcJ_T0077547.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48641039 48651106 - MGP_BALBcJ_P0077547 Hnrnpa2b1 protein_coding protein_coding MGP_BALBcJ_T0077548.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48641079 48643292 - Hnrnpa2b1 protein_coding retained_intron MGP_BALBcJ_T0077549.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48641750 48646449 - MGP_BALBcJ_P0077549 Hnrnpa2b1 protein_coding protein_coding MGP_BALBcJ_T0077550.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48643763 48645371 - Hnrnpa2b1 protein_coding retained_intron MGP_BALBcJ_T0077551.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48644133 48646415 - Hnrnpa2b1 protein_coding retained_intron MGP_BALBcJ_T0077552.1 MGP_BALBcJ_G0030715.1 mouse_genomes_project 6 48644951 48651218 - Hnrnpa2b1 protein_coding retained_intron MGP_BALBcJ_T0001905.1 MGP_BALBcJ_G0001818.1 mouse_genomes_project 6 1311838 1314674 - TEC TEC MGP_BALBcJ_T0010799.1 MGP_BALBcJ_G0008924.1 mouse_genomes_project 6 127167066 127167122 - Mir7649 miRNA miRNA MGP_BALBcJ_T0005109.1 MGP_BALBcJ_G0004362.1 mouse_genomes_project 6 147113503 147116824 + Gm44020 antisense antisense MGP_BALBcJ_T0002139.1 MGP_BALBcJ_G0002051.1 mouse_genomes_project 6 125567602 125571646 + TEC TEC MGP_BALBcJ_T0001942.1 MGP_BALBcJ_G0001855.1 mouse_genomes_project 6 28092922 28095655 + TEC TEC MGP_BALBcJ_T0015517.1 MGP_BALBcJ_G0013614.1 mouse_genomes_project 6 111007561 111008036 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015507.1 MGP_BALBcJ_G0013604.1 mouse_genomes_project 6 107381158 107381606 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102658.1 MGP_BALBcJ_G0040473.1 mouse_genomes_project 6 131153222 131154214 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000125.1 MGP_BALBcJ_G0000095.1 mouse_genomes_project 6 65064057 65064833 + MGP_BALBcJ_P0000125 Igkv1-135 IG_V_gene IG_V_gene MGP_BALBcJ_T0077252.1 MGP_BALBcJ_G0030640.1 mouse_genomes_project 6 39571195 39573938 - Tcaf3 protein_coding processed_transcript MGP_BALBcJ_T0077253.1 MGP_BALBcJ_G0030640.1 mouse_genomes_project 6 39573521 39583663 - MGP_BALBcJ_P0077253 Tcaf3 protein_coding protein_coding MGP_BALBcJ_T0077254.1 MGP_BALBcJ_G0030640.1 mouse_genomes_project 6 39580436 39583983 - MGP_BALBcJ_P0077254 Tcaf3 protein_coding protein_coding MGP_BALBcJ_T0004924.1 MGP_BALBcJ_G0004230.1 mouse_genomes_project 6 40541967 40548284 + 9430018G01Rik antisense antisense MGP_BALBcJ_T0004979.1 MGP_BALBcJ_G0004265.1 mouse_genomes_project 6 81841761 81844989 - Gm43918 antisense antisense MGP_BALBcJ_T0101948.1 MGP_BALBcJ_G0039810.1 mouse_genomes_project 6 127192547 127207591 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101949.1 MGP_BALBcJ_G0039810.1 mouse_genomes_project 6 127192635 127207512 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101252.1 MGP_BALBcJ_G0039288.1 mouse_genomes_project 6 47683679 47683810 - Gm26289 snoRNA snoRNA MGP_BALBcJ_T0078503.1 MGP_BALBcJ_G0030936.1 mouse_genomes_project 6 83373361 83375830 - MGP_BALBcJ_P0078503 Egr4 protein_coding protein_coding MGP_BALBcJ_T0077164.1 MGP_BALBcJ_G0030604.1 mouse_genomes_project 6 37959947 37963291 - MGP_BALBcJ_P0077164 protein_coding protein_coding MGP_BALBcJ_T0002166.1 MGP_BALBcJ_G0002078.1 mouse_genomes_project 6 139106401 139107071 + TEC TEC MGP_BALBcJ_T0010763.1 MGP_BALBcJ_G0008888.1 mouse_genomes_project 6 80894622 80894699 - Mir3470a miRNA miRNA MGP_BALBcJ_T0000317.1 MGP_BALBcJ_G0000258.1 mouse_genomes_project 6 68312584 68313162 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0079944.1 MGP_BALBcJ_G0031212.1 mouse_genomes_project 6 120879247 120907764 + MGP_BALBcJ_P0079944 Foxj2 protein_coding protein_coding MGP_BALBcJ_T0079945.1 MGP_BALBcJ_G0031212.1 mouse_genomes_project 6 120879844 120907739 + MGP_BALBcJ_P0079945 Foxj2 protein_coding protein_coding MGP_BALBcJ_T0079946.1 MGP_BALBcJ_G0031212.1 mouse_genomes_project 6 120886309 120895743 + MGP_BALBcJ_P0079946 Foxj2 protein_coding protein_coding MGP_BALBcJ_T0079888.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120336586 120355874 - MGP_BALBcJ_P0079888 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079889.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120336586 120355874 - MGP_BALBcJ_P0079889 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079890.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120336593 120358511 - MGP_BALBcJ_P0079890 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079891.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120336605 120357725 - MGP_BALBcJ_P0079891 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079892.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120336605 120358511 - MGP_BALBcJ_P0079892 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079893.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120336705 120358507 - MGP_BALBcJ_P0079893 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079894.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120337158 120358474 - Phc1 protein_coding retained_intron MGP_BALBcJ_T0079895.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120337158 120358474 - MGP_BALBcJ_P0079895 Phc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079896.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120337159 120359310 - MGP_BALBcJ_P0079896 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079897.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120344407 120355778 - MGP_BALBcJ_P0079897 Phc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079898.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120344799 120359255 - MGP_BALBcJ_P0079898 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079899.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120351529 120354003 - Phc1 protein_coding retained_intron MGP_BALBcJ_T0079900.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120352252 120358973 - MGP_BALBcJ_P0079900 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079901.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120352991 120358511 - MGP_BALBcJ_P0079901 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079902.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120352992 120356155 - MGP_BALBcJ_P0079902 Phc1 protein_coding protein_coding MGP_BALBcJ_T0079903.1 MGP_BALBcJ_G0031203.1 mouse_genomes_project 6 120352996 120358489 - MGP_BALBcJ_P0079903 Phc1 protein_coding protein_coding MGP_BALBcJ_T0077475.1 MGP_BALBcJ_G0030700.1 mouse_genomes_project 6 46167861 46169693 + Gpnmb protein_coding retained_intron MGP_BALBcJ_T0077476.1 MGP_BALBcJ_G0030700.1 mouse_genomes_project 6 46167930 46189626 + MGP_BALBcJ_P0077476 Gpnmb protein_coding protein_coding MGP_BALBcJ_T0077477.1 MGP_BALBcJ_G0030700.1 mouse_genomes_project 6 46167980 46174313 + MGP_BALBcJ_P0077477 Gpnmb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077478.1 MGP_BALBcJ_G0030700.1 mouse_genomes_project 6 46167992 46202479 + MGP_BALBcJ_P0077478 Gpnmb protein_coding protein_coding MGP_BALBcJ_T0077479.1 MGP_BALBcJ_G0030700.1 mouse_genomes_project 6 46178816 46179744 + Gpnmb protein_coding retained_intron MGP_BALBcJ_T0080906.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141797483 141887221 - MGP_BALBcJ_P0080906 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080907.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141797483 141887221 - MGP_BALBcJ_P0080907 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080908.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141797488 141887204 - MGP_BALBcJ_P0080908 C2cd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080909.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141797491 141886890 - MGP_BALBcJ_P0080909 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080910.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141798045 141886881 - MGP_BALBcJ_P0080910 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080911.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141798296 141887185 - MGP_BALBcJ_P0080911 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080912.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141798302 141800276 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0080913.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141798500 141887119 - MGP_BALBcJ_P0080913 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080914.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141805490 141808483 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0080915.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141813962 141887221 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0080916.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141829015 141854235 - MGP_BALBcJ_P0080916 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080917.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141834385 141837730 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0080918.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141857729 141886963 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0080919.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141859802 141868534 - C2cd5 protein_coding processed_transcript MGP_BALBcJ_T0080920.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141865089 141867069 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0080921.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141865456 141887255 - MGP_BALBcJ_P0080921 C2cd5 protein_coding protein_coding MGP_BALBcJ_T0080922.1 MGP_BALBcJ_G0031454.1 mouse_genomes_project 6 141869964 141887192 - C2cd5 protein_coding retained_intron MGP_BALBcJ_T0079958.1 MGP_BALBcJ_G0031219.1 mouse_genomes_project 6 121160472 121176449 + MGP_BALBcJ_P0079958 Clec4a2 protein_coding protein_coding MGP_BALBcJ_T0079959.1 MGP_BALBcJ_G0031219.1 mouse_genomes_project 6 121175467 121180755 + MGP_BALBcJ_P0079959 Clec4a2 protein_coding protein_coding MGP_BALBcJ_T0079960.1 MGP_BALBcJ_G0031219.1 mouse_genomes_project 6 121175469 121188262 + MGP_BALBcJ_P0079960 Clec4a2 protein_coding protein_coding MGP_BALBcJ_T0079961.1 MGP_BALBcJ_G0031219.1 mouse_genomes_project 6 121176095 121190229 + MGP_BALBcJ_P0079961 Clec4a2 protein_coding protein_coding MGP_BALBcJ_T0079962.1 MGP_BALBcJ_G0031219.1 mouse_genomes_project 6 121176246 121188604 + MGP_BALBcJ_P0079962 Clec4a2 protein_coding protein_coding MGP_BALBcJ_T0015488.1 MGP_BALBcJ_G0013585.1 mouse_genomes_project 6 99045201 99046833 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008687.1 MGP_BALBcJ_G0007019.1 mouse_genomes_project 6 115311336 115314377 - Gm4640 lincRNA lincRNA MGP_BALBcJ_T0102613.1 MGP_BALBcJ_G0040429.1 mouse_genomes_project 6 54570169 54570527 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101294.1 MGP_BALBcJ_G0039330.1 mouse_genomes_project 6 122166865 122166975 + Gm23554 snoRNA snoRNA MGP_BALBcJ_T0001978.1 MGP_BALBcJ_G0001891.1 mouse_genomes_project 6 46400273 46401712 + TEC TEC MGP_BALBcJ_T0000291.1 MGP_BALBcJ_G0000232.1 mouse_genomes_project 6 66300097 66300788 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0002060.1 MGP_BALBcJ_G0001973.1 mouse_genomes_project 6 85916028 85919567 + TEC TEC MGP_BALBcJ_T0076268.1 MGP_BALBcJ_G0030429.1 mouse_genomes_project 6 4926824 4953857 + MGP_BALBcJ_P0076268 Mios protein_coding protein_coding MGP_BALBcJ_T0076269.1 MGP_BALBcJ_G0030429.1 mouse_genomes_project 6 4944214 4953851 + Mios protein_coding retained_intron MGP_BALBcJ_T0076270.1 MGP_BALBcJ_G0030429.1 mouse_genomes_project 6 4947084 4953851 + Mios protein_coding retained_intron MGP_BALBcJ_T0078297.1 MGP_BALBcJ_G0030901.1 mouse_genomes_project 6 80925814 80929486 - MGP_BALBcJ_P0078297 Ino80b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078298.1 MGP_BALBcJ_G0030901.1 mouse_genomes_project 6 80925814 80929486 - MGP_BALBcJ_P0078298 Ino80b protein_coding protein_coding MGP_BALBcJ_T0078299.1 MGP_BALBcJ_G0030901.1 mouse_genomes_project 6 80925877 80929084 - MGP_BALBcJ_P0078299 Ino80b protein_coding protein_coding MGP_BALBcJ_T0078300.1 MGP_BALBcJ_G0030901.1 mouse_genomes_project 6 80928467 80928923 - Ino80b protein_coding retained_intron MGP_BALBcJ_T0080256.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123625723 123671186 + MGP_BALBcJ_P0080256 Vwf protein_coding protein_coding MGP_BALBcJ_T0080257.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123631923 123683746 + Vwf protein_coding retained_intron MGP_BALBcJ_T0080258.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123631923 123671483 + MGP_BALBcJ_P0080258 Vwf protein_coding protein_coding MGP_BALBcJ_T0080259.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123633398 123768381 + MGP_BALBcJ_P0080259 Vwf protein_coding protein_coding MGP_BALBcJ_T0080260.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123645756 123657588 + Vwf protein_coding processed_transcript MGP_BALBcJ_T0080261.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123682519 123722372 + Vwf protein_coding processed_transcript MGP_BALBcJ_T0080262.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123713837 123716545 + Vwf protein_coding retained_intron MGP_BALBcJ_T0080263.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123725786 123741415 + Vwf protein_coding retained_intron MGP_BALBcJ_T0080264.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123728716 123768375 + MGP_BALBcJ_P0080264 Vwf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080265.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123734378 123736075 + Vwf protein_coding retained_intron MGP_BALBcJ_T0080266.1 MGP_BALBcJ_G0031277.1 mouse_genomes_project 6 123767439 123768338 + Vwf protein_coding processed_transcript MGP_BALBcJ_T0015472.1 MGP_BALBcJ_G0013569.1 mouse_genomes_project 6 92886781 92887771 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004910.1 MGP_BALBcJ_G0004218.1 mouse_genomes_project 6 33812759 33860896 + 1700111E14Rik antisense antisense MGP_BALBcJ_T0015504.1 MGP_BALBcJ_G0013601.1 mouse_genomes_project 6 105900312 105900801 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010784.1 MGP_BALBcJ_G0008909.1 mouse_genomes_project 6 114558593 114558663 - Mir7043 miRNA miRNA MGP_BALBcJ_T0080567.1 MGP_BALBcJ_G0031382.1 mouse_genomes_project 6 131659391 131662966 + MGP_BALBcJ_P0080567 5530400C23Rik protein_coding protein_coding MGP_BALBcJ_T0000310.1 MGP_BALBcJ_G0000251.1 mouse_genomes_project 6 67635081 67635363 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0011625.1 MGP_BALBcJ_G0009750.1 mouse_genomes_project 6 49442861 49443048 + Gm27492 misc_RNA misc_RNA MGP_BALBcJ_T0076644.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26193181 26196322 + Ccdc136 protein_coding processed_transcript MGP_BALBcJ_T0076645.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26193502 26224306 + MGP_BALBcJ_P0076645 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076646.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26193515 26224301 + MGP_BALBcJ_P0076646 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076647.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26193557 26224356 + MGP_BALBcJ_P0076647 Ccdc136 protein_coding unknown_likely_coding MGP_BALBcJ_T0076648.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26193557 26224347 + MGP_BALBcJ_P0076648 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076649.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26195798 26224308 + MGP_BALBcJ_P0076649 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076650.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26195798 26224301 + MGP_BALBcJ_P0076650 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076651.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26199737 26224210 + MGP_BALBcJ_P0076651 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076652.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26207457 26224341 + MGP_BALBcJ_P0076652 Ccdc136 protein_coding protein_coding MGP_BALBcJ_T0076653.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26209836 26224305 + Ccdc136 protein_coding processed_transcript MGP_BALBcJ_T0076654.1 MGP_BALBcJ_G0030505.1 mouse_genomes_project 6 26212304 26224307 + Ccdc136 protein_coding processed_transcript MGP_BALBcJ_T0077010.1 MGP_BALBcJ_G0030566.1 mouse_genomes_project 6 35183333 35195111 - MGP_BALBcJ_P0077010 Zc3hav1l protein_coding protein_coding MGP_BALBcJ_T0080458.1 MGP_BALBcJ_G0031326.1 mouse_genomes_project 6 127649152 127675248 - MGP_BALBcJ_P0080458 Clec1a protein_coding protein_coding MGP_BALBcJ_T0080459.1 MGP_BALBcJ_G0031326.1 mouse_genomes_project 6 127651321 127675104 - MGP_BALBcJ_P0080459 Clec1a protein_coding protein_coding MGP_BALBcJ_T0080460.1 MGP_BALBcJ_G0031326.1 mouse_genomes_project 6 127652370 127675240 - MGP_BALBcJ_P0080460 Clec1a protein_coding protein_coding MGP_BALBcJ_T0080461.1 MGP_BALBcJ_G0031326.1 mouse_genomes_project 6 127652441 127675224 - MGP_BALBcJ_P0080461 Clec1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015554.1 MGP_BALBcJ_G0013651.1 mouse_genomes_project 6 120434631 120434925 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080509.1 MGP_BALBcJ_G0031345.1 mouse_genomes_project 6 128480747 128493834 - MGP_BALBcJ_P0080509 Klra7 protein_coding protein_coding MGP_BALBcJ_T0015587.1 MGP_BALBcJ_G0013684.1 mouse_genomes_project 6 126800641 126801131 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079359.1 MGP_BALBcJ_G0031107.1 mouse_genomes_project 6 111506374 111516442 + MGP_BALBcJ_P0079359 Creld1 protein_coding protein_coding MGP_BALBcJ_T0079360.1 MGP_BALBcJ_G0031107.1 mouse_genomes_project 6 111506499 111512308 + Creld1 protein_coding retained_intron MGP_BALBcJ_T0079361.1 MGP_BALBcJ_G0031107.1 mouse_genomes_project 6 111506931 111511477 + Creld1 protein_coding retained_intron MGP_BALBcJ_T0079362.1 MGP_BALBcJ_G0031107.1 mouse_genomes_project 6 111510562 111512794 + Creld1 protein_coding retained_intron MGP_BALBcJ_T0079363.1 MGP_BALBcJ_G0031107.1 mouse_genomes_project 6 111515120 111516447 + Creld1 protein_coding retained_intron MGP_BALBcJ_T0079364.1 MGP_BALBcJ_G0031107.1 mouse_genomes_project 6 111515122 111516439 + Creld1 protein_coding retained_intron MGP_BALBcJ_T0002719.1 MGP_BALBcJ_G0002595.1 mouse_genomes_project 6 38236274 38236538 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0015299.1 MGP_BALBcJ_G0013396.1 mouse_genomes_project 6 43835315 43835763 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100018.1 MGP_BALBcJ_G0038054.1 mouse_genomes_project 6 94607349 94607453 - Gm26011 snRNA snRNA MGP_BALBcJ_T0002014.1 MGP_BALBcJ_G0001927.1 mouse_genomes_project 6 73352032 73353397 - TEC TEC MGP_BALBcJ_T0008706.1 MGP_BALBcJ_G0007036.1 mouse_genomes_project 6 124414880 124420696 + lincRNA lincRNA MGP_BALBcJ_T0008713.1 MGP_BALBcJ_G0007043.1 mouse_genomes_project 6 126711572 126713966 - Gm44009 lincRNA lincRNA MGP_BALBcJ_T0102634.1 MGP_BALBcJ_G0040450.1 mouse_genomes_project 6 84261239 84262373 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011653.1 MGP_BALBcJ_G0009778.1 mouse_genomes_project 6 140712198 140712413 - Gm22036 misc_RNA misc_RNA MGP_BALBcJ_T0015236.1 MGP_BALBcJ_G0013333.1 mouse_genomes_project 6 12950614 12951226 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000150.1 MGP_BALBcJ_G0000115.1 mouse_genomes_project 6 66127193 66127972 + MGP_BALBcJ_P0000150 Igkv1-99 IG_V_gene IG_V_gene MGP_BALBcJ_T0000151.1 MGP_BALBcJ_G0000115.1 mouse_genomes_project 6 66127207 66127972 + MGP_BALBcJ_P0000151 Igkv1-99 IG_V_gene IG_V_gene MGP_BALBcJ_T0015305.1 MGP_BALBcJ_G0013402.1 mouse_genomes_project 6 45506650 45507521 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077180.1 MGP_BALBcJ_G0030615.1 mouse_genomes_project 6 38626620 38655466 - MGP_BALBcJ_P0077180 Trpv5 protein_coding protein_coding MGP_BALBcJ_T0077181.1 MGP_BALBcJ_G0030615.1 mouse_genomes_project 6 38627577 38655352 - MGP_BALBcJ_P0077181 Trpv5 protein_coding protein_coding MGP_BALBcJ_T0005051.1 MGP_BALBcJ_G0004312.1 mouse_genomes_project 6 118877341 118912291 + Gm43915 antisense antisense MGP_BALBcJ_T0078015.1 MGP_BALBcJ_G0030843.1 mouse_genomes_project 6 69455201 69560065 + MGP_BALBcJ_P0078015 Reep1 protein_coding protein_coding MGP_BALBcJ_T0000142.1 MGP_BALBcJ_G0000108.1 mouse_genomes_project 6 65829732 65830213 + MGP_BALBcJ_P0000142 Igkv14-111 IG_V_gene IG_V_gene MGP_BALBcJ_T0004982.1 MGP_BALBcJ_G0004268.1 mouse_genomes_project 6 83844557 83896353 + Gm19265 antisense antisense MGP_BALBcJ_T0076621.1 MGP_BALBcJ_G0030500.1 mouse_genomes_project 6 26066326 26069025 + MGP_BALBcJ_P0076621 Hilpda protein_coding protein_coding MGP_BALBcJ_T0076622.1 MGP_BALBcJ_G0030500.1 mouse_genomes_project 6 26066464 26069285 + MGP_BALBcJ_P0076622 Hilpda protein_coding protein_coding MGP_BALBcJ_T0010779.1 MGP_BALBcJ_G0008904.1 mouse_genomes_project 6 111445124 111445214 + Gm24387 miRNA miRNA MGP_BALBcJ_T0015435.1 MGP_BALBcJ_G0013532.1 mouse_genomes_project 6 80755443 80755801 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004972.1 MGP_BALBcJ_G0004263.1 mouse_genomes_project 6 81519129 81539922 - Vax2os antisense antisense MGP_BALBcJ_T0004973.1 MGP_BALBcJ_G0004263.1 mouse_genomes_project 6 81526424 81538647 - Vax2os antisense antisense MGP_BALBcJ_T0004974.1 MGP_BALBcJ_G0004263.1 mouse_genomes_project 6 81528831 81530245 - Vax2os antisense antisense MGP_BALBcJ_T0004975.1 MGP_BALBcJ_G0004263.1 mouse_genomes_project 6 81529181 81530324 - Vax2os antisense antisense MGP_BALBcJ_T0077470.1 MGP_BALBcJ_G0030697.1 mouse_genomes_project 6 46056943 46060733 + MGP_BALBcJ_P0077470 1600015I10Rik protein_coding protein_coding MGP_BALBcJ_T0080499.1 MGP_BALBcJ_G0031339.1 mouse_genomes_project 6 128049434 128078642 - MGP_BALBcJ_P0080499 Klra17 protein_coding protein_coding MGP_BALBcJ_T0080500.1 MGP_BALBcJ_G0031339.1 mouse_genomes_project 6 128049444 128078644 - MGP_BALBcJ_P0080500 Klra17 protein_coding protein_coding MGP_BALBcJ_T0076398.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14201412 14310538 + MGP_BALBcJ_P0076398 Met protein_coding protein_coding MGP_BALBcJ_T0076399.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14201439 14229613 + MGP_BALBcJ_P0076399 Met protein_coding protein_coding MGP_BALBcJ_T0076400.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14201650 14308788 + MGP_BALBcJ_P0076400 Met protein_coding protein_coding MGP_BALBcJ_T0076401.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14201719 14278115 + Met protein_coding retained_intron MGP_BALBcJ_T0076402.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14229106 14308350 + MGP_BALBcJ_P0076402 Met protein_coding protein_coding MGP_BALBcJ_T0076403.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14272387 14283908 + MGP_BALBcJ_P0076403 Met protein_coding protein_coding MGP_BALBcJ_T0076404.1 MGP_BALBcJ_G0030452.1 mouse_genomes_project 6 14283670 14290097 + MGP_BALBcJ_P0076404 Met protein_coding protein_coding MGP_BALBcJ_T0079213.1 MGP_BALBcJ_G0031083.1 mouse_genomes_project 6 106836408 106867957 + MGP_BALBcJ_P0079213 Edem1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079214.1 MGP_BALBcJ_G0031083.1 mouse_genomes_project 6 106836441 106867949 + MGP_BALBcJ_P0079214 Edem1 protein_coding protein_coding MGP_BALBcJ_T0079215.1 MGP_BALBcJ_G0031083.1 mouse_genomes_project 6 106844357 106851012 + Edem1 protein_coding processed_transcript MGP_BALBcJ_T0079216.1 MGP_BALBcJ_G0031083.1 mouse_genomes_project 6 106856740 106859979 + Edem1 protein_coding retained_intron MGP_BALBcJ_T0079217.1 MGP_BALBcJ_G0031083.1 mouse_genomes_project 6 106860727 106864144 + Edem1 protein_coding retained_intron MGP_BALBcJ_T0011613.1 MGP_BALBcJ_G0009738.1 mouse_genomes_project 6 26956368 26956695 - Gm25580 misc_RNA misc_RNA MGP_BALBcJ_T0008641.1 MGP_BALBcJ_G0006984.1 mouse_genomes_project 6 85695949 85697288 + Gm43904 lincRNA lincRNA MGP_BALBcJ_T0002025.1 MGP_BALBcJ_G0001938.1 mouse_genomes_project 6 77839004 77841658 + TEC TEC MGP_BALBcJ_T0081090.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146927142 146963638 - MGP_BALBcJ_P0081090 Ergic2 protein_coding protein_coding MGP_BALBcJ_T0081091.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146929279 146963371 - MGP_BALBcJ_P0081091 Ergic2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081092.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146929373 146936191 - MGP_BALBcJ_P0081092 Ergic2 protein_coding protein_coding MGP_BALBcJ_T0081093.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146929428 146931272 - MGP_BALBcJ_P0081093 Ergic2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081094.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146929708 146943959 - MGP_BALBcJ_P0081094 Ergic2 protein_coding protein_coding MGP_BALBcJ_T0081095.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146929991 146944944 - Ergic2 protein_coding retained_intron MGP_BALBcJ_T0081096.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146931109 146937805 - Ergic2 protein_coding retained_intron MGP_BALBcJ_T0081097.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146931761 146963638 - Ergic2 protein_coding processed_transcript MGP_BALBcJ_T0081098.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146936135 146945229 - Ergic2 protein_coding retained_intron MGP_BALBcJ_T0081099.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146937598 146943942 - Ergic2 protein_coding processed_transcript MGP_BALBcJ_T0081100.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146937644 146963286 - MGP_BALBcJ_P0081100 Ergic2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081101.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146939017 146945046 - Ergic2 protein_coding processed_transcript MGP_BALBcJ_T0081102.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146943896 146954051 - Ergic2 protein_coding retained_intron MGP_BALBcJ_T0081103.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146950218 146963241 - Ergic2 protein_coding retained_intron MGP_BALBcJ_T0081104.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146952753 146963286 - MGP_BALBcJ_P0081104 Ergic2 protein_coding protein_coding MGP_BALBcJ_T0081105.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146953508 146963285 - Ergic2 protein_coding retained_intron MGP_BALBcJ_T0081106.1 MGP_BALBcJ_G0031485.1 mouse_genomes_project 6 146953961 146963269 - Ergic2 protein_coding processed_transcript MGP_BALBcJ_T0015286.1 MGP_BALBcJ_G0013383.1 mouse_genomes_project 6 38276442 38277005 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098632.1 MGP_BALBcJ_G0036686.1 mouse_genomes_project 6 109622468 109622579 + Gm22093 rRNA rRNA MGP_BALBcJ_T0004947.1 MGP_BALBcJ_G0004246.1 mouse_genomes_project 6 60825921 60829051 - Gm44071 antisense antisense MGP_BALBcJ_T0100005.1 MGP_BALBcJ_G0038041.1 mouse_genomes_project 6 60701419 60701525 - Gm22212 snRNA snRNA MGP_BALBcJ_T0080860.1 MGP_BALBcJ_G0031443.1 mouse_genomes_project 6 141131634 141149399 + MGP_BALBcJ_P0080860 Pyroxd1 protein_coding protein_coding MGP_BALBcJ_T0080861.1 MGP_BALBcJ_G0031443.1 mouse_genomes_project 6 141131647 141133855 + Pyroxd1 protein_coding retained_intron MGP_BALBcJ_T0080862.1 MGP_BALBcJ_G0031443.1 mouse_genomes_project 6 141131658 141148193 + Pyroxd1 protein_coding retained_intron MGP_BALBcJ_T0080863.1 MGP_BALBcJ_G0031443.1 mouse_genomes_project 6 141132916 141143662 + Pyroxd1 protein_coding processed_transcript MGP_BALBcJ_T0080865.1 MGP_BALBcJ_G0031443.1 mouse_genomes_project 6 141138920 141140672 + Pyroxd1 protein_coding retained_intron MGP_BALBcJ_T0015626.1 MGP_BALBcJ_G0013723.1 mouse_genomes_project 6 133788856 133789235 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079597.1 MGP_BALBcJ_G0031149.1 mouse_genomes_project 6 114404423 114429943 + MGP_BALBcJ_P0079597 Olfr212 protein_coding protein_coding MGP_BALBcJ_T0079537.1 MGP_BALBcJ_G0031140.1 mouse_genomes_project 6 113846580 113851874 + MGP_BALBcJ_P0079537 H1foo protein_coding protein_coding MGP_BALBcJ_T0079538.1 MGP_BALBcJ_G0031140.1 mouse_genomes_project 6 113846580 113851874 + MGP_BALBcJ_P0079538 H1foo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079539.1 MGP_BALBcJ_G0031140.1 mouse_genomes_project 6 113846580 113851879 + MGP_BALBcJ_P0079539 H1foo protein_coding protein_coding MGP_BALBcJ_T0079540.1 MGP_BALBcJ_G0031140.1 mouse_genomes_project 6 113846595 113851564 + MGP_BALBcJ_P0079540 H1foo protein_coding protein_coding MGP_BALBcJ_T0079541.1 MGP_BALBcJ_G0031140.1 mouse_genomes_project 6 113850399 113851868 + MGP_BALBcJ_P0079541 H1foo protein_coding protein_coding MGP_BALBcJ_T0099000.1 MGP_BALBcJ_G0037043.1 mouse_genomes_project 6 111823503 111825381 - Gm44167 sense_intronic sense_intronic MGP_BALBcJ_T0078390.1 MGP_BALBcJ_G0030919.1 mouse_genomes_project 6 81601652 81608597 - MGP_BALBcJ_P0078390 Tex261 protein_coding protein_coding MGP_BALBcJ_T0078391.1 MGP_BALBcJ_G0030919.1 mouse_genomes_project 6 81603178 81608574 - Tex261 protein_coding retained_intron MGP_BALBcJ_T0078392.1 MGP_BALBcJ_G0030919.1 mouse_genomes_project 6 81603952 81605240 - Tex261 protein_coding retained_intron MGP_BALBcJ_T0078393.1 MGP_BALBcJ_G0030919.1 mouse_genomes_project 6 81606371 81608542 - Tex261 protein_coding retained_intron MGP_BALBcJ_T0076315.1 MGP_BALBcJ_G0030438.1 mouse_genomes_project 6 8998504 9430145 - MGP_BALBcJ_P0076315 Thsd7a protein_coding protein_coding MGP_BALBcJ_T0076316.1 MGP_BALBcJ_G0030438.1 mouse_genomes_project 6 9003981 9430302 - MGP_BALBcJ_P0076316 Thsd7a protein_coding protein_coding MGP_BALBcJ_T0076317.1 MGP_BALBcJ_G0030438.1 mouse_genomes_project 6 9004021 9005224 - Thsd7a protein_coding retained_intron MGP_BALBcJ_T0076318.1 MGP_BALBcJ_G0030438.1 mouse_genomes_project 6 9004243 9111883 - Thsd7a protein_coding processed_transcript MGP_BALBcJ_T0076319.1 MGP_BALBcJ_G0030438.1 mouse_genomes_project 6 9011689 9015581 - Thsd7a protein_coding retained_intron MGP_BALBcJ_T0076320.1 MGP_BALBcJ_G0030438.1 mouse_genomes_project 6 9154925 9241492 - Thsd7a protein_coding processed_transcript MGP_BALBcJ_T0002157.1 MGP_BALBcJ_G0002069.1 mouse_genomes_project 6 135339702 135342088 + TEC TEC MGP_BALBcJ_T0078285.1 MGP_BALBcJ_G0030898.1 mouse_genomes_project 6 80913079 80913979 + MGP_BALBcJ_P0078285 Mrpl53 protein_coding protein_coding MGP_BALBcJ_T0078286.1 MGP_BALBcJ_G0030898.1 mouse_genomes_project 6 80913159 80913979 + Mrpl53 protein_coding retained_intron MGP_BALBcJ_T0000124.1 MGP_BALBcJ_G0000094.1 mouse_genomes_project 6 65013725 65014445 + MGP_BALBcJ_P0000124 IG_V_gene IG_V_gene MGP_BALBcJ_T0004996.1 MGP_BALBcJ_G0004274.1 mouse_genomes_project 6 85576184 85582201 + Gm44097 antisense antisense MGP_BALBcJ_T0015292.1 MGP_BALBcJ_G0013389.1 mouse_genomes_project 6 40443358 40445106 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004920.1 MGP_BALBcJ_G0004227.1 mouse_genomes_project 6 39305614 39326670 - Gm44284 antisense antisense MGP_BALBcJ_T0080242.1 MGP_BALBcJ_G0031273.1 mouse_genomes_project 6 123404632 123414380 + MGP_BALBcJ_P0080242 Scnn1a protein_coding protein_coding MGP_BALBcJ_T0080243.1 MGP_BALBcJ_G0031273.1 mouse_genomes_project 6 123404706 123427745 + MGP_BALBcJ_P0080243 Scnn1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080244.1 MGP_BALBcJ_G0031273.1 mouse_genomes_project 6 123404948 123427968 + MGP_BALBcJ_P0080244 Scnn1a protein_coding protein_coding MGP_BALBcJ_T0080245.1 MGP_BALBcJ_G0031273.1 mouse_genomes_project 6 123405308 123427444 + MGP_BALBcJ_P0080245 Scnn1a protein_coding protein_coding MGP_BALBcJ_T0077142.1 MGP_BALBcJ_G0030594.1 mouse_genomes_project 6 37482972 37487657 - MGP_BALBcJ_P0077142 Prss37 protein_coding protein_coding MGP_BALBcJ_T0077143.1 MGP_BALBcJ_G0030594.1 mouse_genomes_project 6 37487317 37487632 - Prss37 protein_coding processed_transcript MGP_BALBcJ_T0015289.1 MGP_BALBcJ_G0013386.1 mouse_genomes_project 6 39505589 39506387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077282.1 MGP_BALBcJ_G0030655.1 mouse_genomes_project 6 40234850 40235904 + MGP_BALBcJ_P0077282 Olfr13 protein_coding protein_coding MGP_BALBcJ_T0076691.1 MGP_BALBcJ_G0030513.1 mouse_genomes_project 6 26551099 26553695 + Smo protein_coding retained_intron MGP_BALBcJ_T0076692.1 MGP_BALBcJ_G0030513.1 mouse_genomes_project 6 26551385 26577319 + MGP_BALBcJ_P0076692 Smo protein_coding protein_coding MGP_BALBcJ_T0002066.1 MGP_BALBcJ_G0001979.1 mouse_genomes_project 6 86674048 86676937 + TEC TEC MGP_BALBcJ_T0004882.1 MGP_BALBcJ_G0004198.1 mouse_genomes_project 6 13800490 13907828 - Gm4876 antisense antisense MGP_BALBcJ_T0004883.1 MGP_BALBcJ_G0004198.1 mouse_genomes_project 6 13811741 13908172 - Gm4876 antisense antisense MGP_BALBcJ_T0004884.1 MGP_BALBcJ_G0004198.1 mouse_genomes_project 6 13832521 13907804 - Gm4876 antisense antisense MGP_BALBcJ_T0004885.1 MGP_BALBcJ_G0004198.1 mouse_genomes_project 6 13845941 13907956 - Gm4876 antisense antisense MGP_BALBcJ_T0004886.1 MGP_BALBcJ_G0004198.1 mouse_genomes_project 6 13898469 13908085 - Gm4876 antisense antisense MGP_BALBcJ_T0004887.1 MGP_BALBcJ_G0004198.1 mouse_genomes_project 6 13907727 13908149 - Gm4876 antisense antisense MGP_BALBcJ_T0076773.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27360271 27383521 + MGP_BALBcJ_P0076773 Cpa2 protein_coding protein_coding MGP_BALBcJ_T0076774.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27360331 27363162 + Cpa2 protein_coding retained_intron MGP_BALBcJ_T0076775.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27360359 27365800 + Cpa2 protein_coding processed_transcript MGP_BALBcJ_T0076776.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27361897 27363682 + Cpa2 protein_coding retained_intron MGP_BALBcJ_T0076777.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27362605 27370708 + Cpa2 protein_coding retained_intron MGP_BALBcJ_T0076778.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27363174 27367938 + Cpa2 protein_coding retained_intron MGP_BALBcJ_T0076779.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27365331 27365845 + Cpa2 protein_coding processed_transcript MGP_BALBcJ_T0076780.1 MGP_BALBcJ_G0030522.1 mouse_genomes_project 6 27370554 27383293 + Cpa2 protein_coding retained_intron MGP_BALBcJ_T0000296.1 MGP_BALBcJ_G0000237.1 mouse_genomes_project 6 66532670 66532956 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0001924.1 MGP_BALBcJ_G0001837.1 mouse_genomes_project 6 14858970 14860790 - TEC TEC MGP_BALBcJ_T0015372.1 MGP_BALBcJ_G0013469.1 mouse_genomes_project 6 63451105 63452681 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081082.1 MGP_BALBcJ_G0031482.1 mouse_genomes_project 6 146023945 146036043 - MGP_BALBcJ_P0081082 Pthlh protein_coding protein_coding MGP_BALBcJ_T0081083.1 MGP_BALBcJ_G0031482.1 mouse_genomes_project 6 146023953 146036059 - MGP_BALBcJ_P0081083 Pthlh protein_coding protein_coding MGP_BALBcJ_T0080085.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122900969 122915435 - MGP_BALBcJ_P0080085 Usp5 protein_coding protein_coding MGP_BALBcJ_T0080086.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122900988 122915386 - MGP_BALBcJ_P0080086 Usp5 protein_coding protein_coding MGP_BALBcJ_T0080087.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122901370 122904588 - Usp5 protein_coding retained_intron MGP_BALBcJ_T0080088.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122903196 122903844 - Usp5 protein_coding retained_intron MGP_BALBcJ_T0080089.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122907725 122909420 - Usp5 protein_coding retained_intron MGP_BALBcJ_T0080090.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122908569 122915359 - MGP_BALBcJ_P0080090 Usp5 protein_coding protein_coding MGP_BALBcJ_T0080091.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122908677 122909574 - Usp5 protein_coding retained_intron MGP_BALBcJ_T0080092.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122908793 122910151 - Usp5 protein_coding retained_intron MGP_BALBcJ_T0080093.1 MGP_BALBcJ_G0031248.1 mouse_genomes_project 6 122910086 122914846 - MGP_BALBcJ_P0080093 Usp5 protein_coding protein_coding MGP_BALBcJ_T0015492.1 MGP_BALBcJ_G0013589.1 mouse_genomes_project 6 100725583 100727956 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008561.1 MGP_BALBcJ_G0006920.1 mouse_genomes_project 6 45656846 45657748 - 1700026J14Rik lincRNA lincRNA MGP_BALBcJ_T0081079.1 MGP_BALBcJ_G0031481.1 mouse_genomes_project 6 145855104 145877944 + MGP_BALBcJ_P0081079 Klhl42 protein_coding protein_coding MGP_BALBcJ_T0081080.1 MGP_BALBcJ_G0031481.1 mouse_genomes_project 6 145869431 145873013 + Klhl42 protein_coding processed_transcript MGP_BALBcJ_T0081081.1 MGP_BALBcJ_G0031481.1 mouse_genomes_project 6 145872933 145875601 + MGP_BALBcJ_P0081081 Klhl42 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077250.1 MGP_BALBcJ_G0030638.1 mouse_genomes_project 6 39465940 39467189 - MGP_BALBcJ_P0077250 Olfr456 protein_coding protein_coding MGP_BALBcJ_T0010781.1 MGP_BALBcJ_G0008906.1 mouse_genomes_project 6 111732804 111732862 + Mir7042 miRNA miRNA MGP_BALBcJ_T0079323.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111412241 111422452 + MGP_BALBcJ_P0079323 Ttll3 protein_coding protein_coding MGP_BALBcJ_T0079324.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111413718 111421852 + Ttll3 protein_coding processed_transcript MGP_BALBcJ_T0079325.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111415439 111437562 + MGP_BALBcJ_P0079325 Ttll3 protein_coding protein_coding MGP_BALBcJ_T0079326.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111415478 111437544 + MGP_BALBcJ_P0079326 Ttll3 protein_coding protein_coding MGP_BALBcJ_T0079327.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111416141 111437558 + MGP_BALBcJ_P0079327 Ttll3 protein_coding protein_coding MGP_BALBcJ_T0079328.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111416158 111432833 + MGP_BALBcJ_P0079328 Ttll3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079329.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111420739 111437537 + Ttll3 protein_coding retained_intron MGP_BALBcJ_T0079330.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111432139 111432833 + Ttll3 protein_coding processed_transcript MGP_BALBcJ_T0079331.1 MGP_BALBcJ_G0031101.1 mouse_genomes_project 6 111435805 111437533 + Ttll3 protein_coding processed_transcript MGP_BALBcJ_T0005103.1 MGP_BALBcJ_G0004357.1 mouse_genomes_project 6 144249854 144252100 + Gm15499 antisense antisense MGP_BALBcJ_T0010725.1 MGP_BALBcJ_G0008850.1 mouse_genomes_project 6 434411 434496 - Mir653 miRNA miRNA MGP_BALBcJ_T0004946.1 MGP_BALBcJ_G0004245.1 mouse_genomes_project 6 56356444 56392830 + BB365896 antisense antisense MGP_BALBcJ_T0102650.1 MGP_BALBcJ_G0040465.1 mouse_genomes_project 6 127227734 127228574 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0080288.1 MGP_BALBcJ_G0031284.1 mouse_genomes_project 6 124939470 124961262 + MGP_BALBcJ_P0080288 Akap3 protein_coding protein_coding MGP_BALBcJ_T0080289.1 MGP_BALBcJ_G0031284.1 mouse_genomes_project 6 124939516 124961259 + MGP_BALBcJ_P0080289 Akap3 protein_coding protein_coding MGP_BALBcJ_T0080290.1 MGP_BALBcJ_G0031284.1 mouse_genomes_project 6 124939532 124961262 + MGP_BALBcJ_P0080290 Akap3 protein_coding protein_coding MGP_BALBcJ_T0079269.1 MGP_BALBcJ_G0031093.1 mouse_genomes_project 6 111186918 111214297 - MGP_BALBcJ_P0079269 Lhfpl4 protein_coding protein_coding MGP_BALBcJ_T0079270.1 MGP_BALBcJ_G0031093.1 mouse_genomes_project 6 111194282 111212922 - MGP_BALBcJ_P0079270 Lhfpl4 protein_coding protein_coding MGP_BALBcJ_T0079228.1 MGP_BALBcJ_G0031087.1 mouse_genomes_project 6 110477419 110490808 + MGP_BALBcJ_P0079228 Cav3 protein_coding protein_coding MGP_BALBcJ_T0076558.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24044042 24913410 - MGP_BALBcJ_P0076558 Grm8 protein_coding protein_coding MGP_BALBcJ_T0076559.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24044051 24905013 - MGP_BALBcJ_P0076559 Grm8 protein_coding protein_coding MGP_BALBcJ_T0076560.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24044535 24905083 - MGP_BALBcJ_P0076560 Grm8 protein_coding protein_coding MGP_BALBcJ_T0076561.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24398355 24914025 - MGP_BALBcJ_P0076561 Grm8 protein_coding unknown_likely_coding MGP_BALBcJ_T0076562.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24538078 24912213 - MGP_BALBcJ_P0076562 Grm8 protein_coding protein_coding MGP_BALBcJ_T0076563.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24713946 24914043 - Grm8 protein_coding processed_transcript MGP_BALBcJ_T0076564.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24904951 24912017 - MGP_BALBcJ_P0076564 Grm8 protein_coding protein_coding MGP_BALBcJ_T0076565.1 MGP_BALBcJ_G0030488.1 mouse_genomes_project 6 24910915 24913250 - Grm8 protein_coding processed_transcript MGP_BALBcJ_T0015480.1 MGP_BALBcJ_G0013577.1 mouse_genomes_project 6 96811889 96812169 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015478.1 MGP_BALBcJ_G0013575.1 mouse_genomes_project 6 95499123 95500849 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015274.1 MGP_BALBcJ_G0013371.1 mouse_genomes_project 6 34575379 34576336 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099986.1 MGP_BALBcJ_G0038022.1 mouse_genomes_project 6 11130700 11130803 - Gm23013 snRNA snRNA MGP_BALBcJ_T0076238.1 MGP_BALBcJ_G0030420.1 mouse_genomes_project 6 2767690 2943948 - MGP_BALBcJ_P0076238 Slc25a13 protein_coding protein_coding MGP_BALBcJ_T0076239.1 MGP_BALBcJ_G0030420.1 mouse_genomes_project 6 2767691 2944003 - MGP_BALBcJ_P0076239 Slc25a13 protein_coding protein_coding MGP_BALBcJ_T0076240.1 MGP_BALBcJ_G0030420.1 mouse_genomes_project 6 2794704 2821669 - Slc25a13 protein_coding processed_transcript MGP_BALBcJ_T0076241.1 MGP_BALBcJ_G0030420.1 mouse_genomes_project 6 2841486 2900764 - Slc25a13 protein_coding processed_transcript MGP_BALBcJ_T0076242.1 MGP_BALBcJ_G0030420.1 mouse_genomes_project 6 2858124 2918129 - Slc25a13 protein_coding retained_intron MGP_BALBcJ_T0004917.1 MGP_BALBcJ_G0004224.1 mouse_genomes_project 6 36836860 36837300 - Gm26833 antisense antisense MGP_BALBcJ_T0079190.1 MGP_BALBcJ_G0031079.1 mouse_genomes_project 6 106113126 106193174 - MGP_BALBcJ_P0079190 Sumf1 protein_coding protein_coding MGP_BALBcJ_T0079191.1 MGP_BALBcJ_G0031079.1 mouse_genomes_project 6 106114445 106133313 - Sumf1 protein_coding processed_transcript MGP_BALBcJ_T0079192.1 MGP_BALBcJ_G0031079.1 mouse_genomes_project 6 106114574 106193148 - MGP_BALBcJ_P0079192 Sumf1 protein_coding protein_coding MGP_BALBcJ_T0079193.1 MGP_BALBcJ_G0031079.1 mouse_genomes_project 6 106114574 106193148 - MGP_BALBcJ_P0079193 Sumf1 protein_coding protein_coding MGP_BALBcJ_T0079194.1 MGP_BALBcJ_G0031079.1 mouse_genomes_project 6 106124473 106152339 - MGP_BALBcJ_P0079194 Sumf1 protein_coding protein_coding MGP_BALBcJ_T0079195.1 MGP_BALBcJ_G0031079.1 mouse_genomes_project 6 106151956 106159644 - Sumf1 protein_coding retained_intron MGP_BALBcJ_T0080559.1 MGP_BALBcJ_G0031376.1 mouse_genomes_project 6 131291968 131292886 - MGP_BALBcJ_P0080559 Tas2r116 protein_coding protein_coding MGP_BALBcJ_T0078354.1 MGP_BALBcJ_G0030910.1 mouse_genomes_project 6 81182028 81274597 - MGP_BALBcJ_P0078354 Tet3 protein_coding protein_coding MGP_BALBcJ_T0078355.1 MGP_BALBcJ_G0030910.1 mouse_genomes_project 6 81217934 81261252 - Tet3 protein_coding processed_transcript MGP_BALBcJ_T0078356.1 MGP_BALBcJ_G0030910.1 mouse_genomes_project 6 81223787 81278768 - MGP_BALBcJ_P0078356 Tet3 protein_coding protein_coding MGP_BALBcJ_T0078357.1 MGP_BALBcJ_G0030910.1 mouse_genomes_project 6 81256370 81261206 - Tet3 protein_coding retained_intron MGP_BALBcJ_T0015421.1 MGP_BALBcJ_G0013518.1 mouse_genomes_project 6 73162875 73163860 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002670.1 MGP_BALBcJ_G0002552.1 mouse_genomes_project 6 38240533 38241021 + MGP_BALBcJ_P0002670 Trbv29 TR_V_gene TR_V_gene MGP_BALBcJ_T0015250.1 MGP_BALBcJ_G0013347.1 mouse_genomes_project 6 19005059 19005911 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001932.1 MGP_BALBcJ_G0001845.1 mouse_genomes_project 6 24997983 25004987 - TEC TEC MGP_BALBcJ_T0015324.1 MGP_BALBcJ_G0013421.1 mouse_genomes_project 6 48148494 48148732 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015445.1 MGP_BALBcJ_G0013542.1 mouse_genomes_project 6 82938109 82938251 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015307.1 MGP_BALBcJ_G0013404.1 mouse_genomes_project 6 45943186 45944580 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015338.1 MGP_BALBcJ_G0013435.1 mouse_genomes_project 6 55778618 55778782 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015375.1 MGP_BALBcJ_G0013472.1 mouse_genomes_project 6 63858577 63858743 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002095.1 MGP_BALBcJ_G0002008.1 mouse_genomes_project 6 98346529 98348140 - TEC TEC MGP_BALBcJ_T0011642.1 MGP_BALBcJ_G0009767.1 mouse_genomes_project 6 97950914 97951236 - Gm24248 misc_RNA misc_RNA MGP_BALBcJ_T0002150.1 MGP_BALBcJ_G0002062.1 mouse_genomes_project 6 131286396 131286709 - TEC TEC MGP_BALBcJ_T0077257.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39654490 39696177 - MGP_BALBcJ_P0077257 Tcaf1 protein_coding protein_coding MGP_BALBcJ_T0077258.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39656430 39679203 - MGP_BALBcJ_P0077258 Tcaf1 protein_coding protein_coding MGP_BALBcJ_T0077259.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39657517 39679175 - MGP_BALBcJ_P0077259 Tcaf1 protein_coding protein_coding MGP_BALBcJ_T0077260.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39663411 39679119 - Tcaf1 protein_coding retained_intron MGP_BALBcJ_T0077261.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39665741 39696160 - Tcaf1 protein_coding processed_transcript MGP_BALBcJ_T0077262.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39671354 39696160 - Tcaf1 protein_coding retained_intron MGP_BALBcJ_T0077263.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39676414 39679124 - Tcaf1 protein_coding processed_transcript MGP_BALBcJ_T0077264.1 MGP_BALBcJ_G0030642.1 mouse_genomes_project 6 39695185 39696161 - Tcaf1 protein_coding processed_transcript MGP_BALBcJ_T0079849.1 MGP_BALBcJ_G0031193.1 mouse_genomes_project 6 119105237 119108877 + MGP_BALBcJ_P0079849 Pex26 protein_coding protein_coding MGP_BALBcJ_T0079850.1 MGP_BALBcJ_G0031193.1 mouse_genomes_project 6 119105324 119117660 + MGP_BALBcJ_P0079850 Pex26 protein_coding protein_coding MGP_BALBcJ_T0079851.1 MGP_BALBcJ_G0031193.1 mouse_genomes_project 6 119105333 119108517 + Pex26 protein_coding retained_intron MGP_BALBcJ_T0079852.1 MGP_BALBcJ_G0031193.1 mouse_genomes_project 6 119105700 119115090 + MGP_BALBcJ_P0079852 Pex26 protein_coding protein_coding MGP_BALBcJ_T0015243.1 MGP_BALBcJ_G0013340.1 mouse_genomes_project 6 15867701 15869010 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077663.1 MGP_BALBcJ_G0030742.1 mouse_genomes_project 6 51714416 51722601 - MGP_BALBcJ_P0077663 Scrn1 protein_coding protein_coding MGP_BALBcJ_T0077664.1 MGP_BALBcJ_G0030742.1 mouse_genomes_project 6 51719141 51780827 - MGP_BALBcJ_P0077664 Scrn1 protein_coding protein_coding MGP_BALBcJ_T0077665.1 MGP_BALBcJ_G0030742.1 mouse_genomes_project 6 51719516 51734992 - MGP_BALBcJ_P0077665 Scrn1 protein_coding protein_coding MGP_BALBcJ_T0077666.1 MGP_BALBcJ_G0030742.1 mouse_genomes_project 6 51722347 51728057 - Scrn1 protein_coding retained_intron MGP_BALBcJ_T0077667.1 MGP_BALBcJ_G0030742.1 mouse_genomes_project 6 51748914 51768801 - MGP_BALBcJ_P0077667 Scrn1 protein_coding protein_coding MGP_BALBcJ_T0077668.1 MGP_BALBcJ_G0030742.1 mouse_genomes_project 6 51766063 51768792 - Scrn1 protein_coding processed_transcript MGP_BALBcJ_T0002120.1 MGP_BALBcJ_G0002033.1 mouse_genomes_project 6 113511816 113512226 + TEC TEC MGP_BALBcJ_T0015552.1 MGP_BALBcJ_G0013649.1 mouse_genomes_project 6 120314675 120315057 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078847.1 MGP_BALBcJ_G0031002.1 mouse_genomes_project 6 87704272 87856785 + MGP_BALBcJ_P0078847 Vmn1r41 protein_coding protein_coding MGP_BALBcJ_T0008600.1 MGP_BALBcJ_G0006950.1 mouse_genomes_project 6 63911090 63918862 - lincRNA lincRNA MGP_BALBcJ_T0008601.1 MGP_BALBcJ_G0006950.1 mouse_genomes_project 6 63913335 63918901 - lincRNA lincRNA MGP_BALBcJ_T0077605.1 MGP_BALBcJ_G0030732.1 mouse_genomes_project 6 49513509 49518390 + MGP_BALBcJ_P0077605 Evx1 protein_coding protein_coding MGP_BALBcJ_T0077606.1 MGP_BALBcJ_G0030732.1 mouse_genomes_project 6 49513563 49516656 + MGP_BALBcJ_P0077606 Evx1 protein_coding protein_coding MGP_BALBcJ_T0002709.1 MGP_BALBcJ_G0002585.1 mouse_genomes_project 6 38051057 38051342 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0101291.1 MGP_BALBcJ_G0039327.1 mouse_genomes_project 6 121983302 121983409 + Gm22763 snoRNA snoRNA MGP_BALBcJ_T0015352.1 MGP_BALBcJ_G0013449.1 mouse_genomes_project 6 60136717 60136954 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080989.1 MGP_BALBcJ_G0031463.1 mouse_genomes_project 6 144420238 144426598 + MGP_BALBcJ_P0080989 Tuba3b protein_coding protein_coding MGP_BALBcJ_T0100044.1 MGP_BALBcJ_G0038080.1 mouse_genomes_project 6 147830931 147831035 - Gm23462 snRNA snRNA MGP_BALBcJ_T0005065.1 MGP_BALBcJ_G0004325.1 mouse_genomes_project 6 125201487 125204281 + Gm43126 antisense antisense MGP_BALBcJ_T0008696.1 MGP_BALBcJ_G0007026.1 mouse_genomes_project 6 116144303 116146651 + Gm30557 lincRNA lincRNA MGP_BALBcJ_T0015434.1 MGP_BALBcJ_G0013531.1 mouse_genomes_project 6 80689726 80690920 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077807.1 MGP_BALBcJ_G0030789.1 mouse_genomes_project 6 55192777 55193873 - MGP_BALBcJ_P0077807 Vmn1r22 protein_coding protein_coding MGP_BALBcJ_T0001912.1 MGP_BALBcJ_G0001825.1 mouse_genomes_project 6 2012026 2013852 + TEC TEC MGP_BALBcJ_T0080349.1 MGP_BALBcJ_G0031298.1 mouse_genomes_project 6 126436253 126474640 - MGP_BALBcJ_P0080349 Tulp3 protein_coding protein_coding MGP_BALBcJ_T0080350.1 MGP_BALBcJ_G0031298.1 mouse_genomes_project 6 126438076 126440618 - Tulp3 protein_coding processed_transcript MGP_BALBcJ_T0080351.1 MGP_BALBcJ_G0031298.1 mouse_genomes_project 6 126446763 126474630 - Tulp3 protein_coding retained_intron MGP_BALBcJ_T0080352.1 MGP_BALBcJ_G0031298.1 mouse_genomes_project 6 126449399 126474604 - MGP_BALBcJ_P0080352 Tulp3 protein_coding protein_coding MGP_BALBcJ_T0080353.1 MGP_BALBcJ_G0031298.1 mouse_genomes_project 6 126456150 126459573 - Tulp3 protein_coding retained_intron MGP_BALBcJ_T0080354.1 MGP_BALBcJ_G0031298.1 mouse_genomes_project 6 126456829 126474614 - MGP_BALBcJ_P0080354 Tulp3 protein_coding protein_coding MGP_BALBcJ_T0077723.1 MGP_BALBcJ_G0030757.1 mouse_genomes_project 6 53083374 53218256 + MGP_BALBcJ_P0077723 Ccdc129 protein_coding protein_coding MGP_BALBcJ_T0077724.1 MGP_BALBcJ_G0030757.1 mouse_genomes_project 6 53133378 53218369 + Ccdc129 protein_coding processed_transcript MGP_BALBcJ_T0018215.1 MGP_BALBcJ_G0015567.1 mouse_genomes_project 6 45973991 45989347 - Gm44764 processed_transcript lincRNA MGP_BALBcJ_T0018216.1 MGP_BALBcJ_G0015567.1 mouse_genomes_project 6 45988534 45989354 - Gm44764 processed_transcript retained_intron MGP_BALBcJ_T0078959.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89760613 89866621 - MGP_BALBcJ_P0078959 Grip2 protein_coding unknown_likely_coding MGP_BALBcJ_T0078960.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89760617 89806938 - MGP_BALBcJ_P0078960 Grip2 protein_coding protein_coding MGP_BALBcJ_T0078961.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89760617 89827252 - MGP_BALBcJ_P0078961 Grip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078962.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89762556 89806800 - MGP_BALBcJ_P0078962 Grip2 protein_coding protein_coding MGP_BALBcJ_T0078963.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89782726 89806875 - MGP_BALBcJ_P0078963 Grip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078964.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89783795 89795724 - MGP_BALBcJ_P0078964 Grip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078965.1 MGP_BALBcJ_G0031031.1 mouse_genomes_project 6 89792185 89795740 - Grip2 protein_coding retained_intron MGP_BALBcJ_T0100025.1 MGP_BALBcJ_G0038061.1 mouse_genomes_project 6 110611389 110611496 - Gm23002 snRNA snRNA MGP_BALBcJ_T0008507.1 MGP_BALBcJ_G0006886.1 mouse_genomes_project 6 27121131 27148294 + 1700095J07Rik lincRNA lincRNA MGP_BALBcJ_T0008508.1 MGP_BALBcJ_G0006886.1 mouse_genomes_project 6 27121147 27124295 + 1700095J07Rik lincRNA lincRNA MGP_BALBcJ_T0078222.1 MGP_BALBcJ_G0030885.1 mouse_genomes_project 6 80524240 80573688 - MGP_BALBcJ_P0078222 Hk2 protein_coding protein_coding MGP_BALBcJ_T0078223.1 MGP_BALBcJ_G0030885.1 mouse_genomes_project 6 80524277 80525527 - Hk2 protein_coding processed_transcript MGP_BALBcJ_T0078224.1 MGP_BALBcJ_G0030885.1 mouse_genomes_project 6 80559284 80572662 - MGP_BALBcJ_P0078224 Hk2 protein_coding protein_coding MGP_BALBcJ_T0078669.1 MGP_BALBcJ_G0030968.1 mouse_genomes_project 6 85267138 85272433 - MGP_BALBcJ_P0078669 Gkn1 protein_coding protein_coding MGP_BALBcJ_T0076992.1 MGP_BALBcJ_G0030562.1 mouse_genomes_project 6 34879005 34942500 - MGP_BALBcJ_P0076992 Svopl protein_coding protein_coding MGP_BALBcJ_T0076993.1 MGP_BALBcJ_G0030562.1 mouse_genomes_project 6 34879778 34926595 - MGP_BALBcJ_P0076993 Svopl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076994.1 MGP_BALBcJ_G0030562.1 mouse_genomes_project 6 34910249 34918698 - Svopl protein_coding retained_intron MGP_BALBcJ_T0076995.1 MGP_BALBcJ_G0030562.1 mouse_genomes_project 6 34910551 34914043 - Svopl protein_coding retained_intron MGP_BALBcJ_T0076996.1 MGP_BALBcJ_G0030562.1 mouse_genomes_project 6 34910704 34942500 - Svopl protein_coding retained_intron MGP_BALBcJ_T0015652.1 MGP_BALBcJ_G0013749.1 mouse_genomes_project 6 146043690 146044503 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077304.1 MGP_BALBcJ_G0030662.1 mouse_genomes_project 6 42109924 44397950 + MGP_BALBcJ_P0077304 Cntnap2 protein_coding protein_coding MGP_BALBcJ_T0077305.1 MGP_BALBcJ_G0030662.1 mouse_genomes_project 6 43238037 43503175 + Cntnap2 protein_coding processed_transcript MGP_BALBcJ_T0077306.1 MGP_BALBcJ_G0030662.1 mouse_genomes_project 6 44102626 44157109 + MGP_BALBcJ_P0077306 Cntnap2 protein_coding protein_coding MGP_BALBcJ_T0077307.1 MGP_BALBcJ_G0030662.1 mouse_genomes_project 6 44337454 44397946 + MGP_BALBcJ_P0077307 Cntnap2 protein_coding protein_coding MGP_BALBcJ_T0077308.1 MGP_BALBcJ_G0030662.1 mouse_genomes_project 6 44337520 44393170 + MGP_BALBcJ_P0077308 Cntnap2 protein_coding protein_coding MGP_BALBcJ_T0099004.1 MGP_BALBcJ_G0037047.1 mouse_genomes_project 6 133539119 133542118 - Gm44366 sense_intronic sense_intronic MGP_BALBcJ_T0077799.1 MGP_BALBcJ_G0030787.1 mouse_genomes_project 6 55019102 55118524 - MGP_BALBcJ_P0077799 Vopp1 protein_coding protein_coding MGP_BALBcJ_T0077800.1 MGP_BALBcJ_G0030787.1 mouse_genomes_project 6 55043269 55118527 - MGP_BALBcJ_P0077800 Vopp1 protein_coding protein_coding MGP_BALBcJ_T0077801.1 MGP_BALBcJ_G0030787.1 mouse_genomes_project 6 55045576 55118538 - MGP_BALBcJ_P0077801 Vopp1 protein_coding protein_coding MGP_BALBcJ_T0077802.1 MGP_BALBcJ_G0030787.1 mouse_genomes_project 6 55049360 55118542 - MGP_BALBcJ_P0077802 Vopp1 protein_coding protein_coding MGP_BALBcJ_T0077803.1 MGP_BALBcJ_G0030787.1 mouse_genomes_project 6 55053580 55118028 - Vopp1 protein_coding processed_transcript MGP_BALBcJ_T0076164.1 MGP_BALBcJ_G0030406.1 mouse_genomes_project 6 704826 708469 + MGP_BALBcJ_P0076164 Gngt1 protein_coding protein_coding MGP_BALBcJ_T0076165.1 MGP_BALBcJ_G0030406.1 mouse_genomes_project 6 704831 707935 + Gngt1 protein_coding retained_intron MGP_BALBcJ_T0077916.1 MGP_BALBcJ_G0030817.1 mouse_genomes_project 6 64067328 64097010 - MGP_BALBcJ_P0077916 protein_coding protein_coding MGP_BALBcJ_T0078835.1 MGP_BALBcJ_G0030998.1 mouse_genomes_project 6 87285357 87326753 - MGP_BALBcJ_P0078835 Plxna1 protein_coding protein_coding MGP_BALBcJ_T0078836.1 MGP_BALBcJ_G0030998.1 mouse_genomes_project 6 87289677 87290143 - Plxna1 protein_coding retained_intron MGP_BALBcJ_T0078837.1 MGP_BALBcJ_G0030998.1 mouse_genomes_project 6 87291568 87293687 - MGP_BALBcJ_P0078837 Plxna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078838.1 MGP_BALBcJ_G0030998.1 mouse_genomes_project 6 87299431 87302124 - Plxna1 protein_coding processed_transcript MGP_BALBcJ_T0078839.1 MGP_BALBcJ_G0030998.1 mouse_genomes_project 6 87304464 87311645 - MGP_BALBcJ_P0078839 Plxna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010751.1 MGP_BALBcJ_G0008876.1 mouse_genomes_project 6 48807462 48807539 + Gm22914 miRNA miRNA MGP_BALBcJ_T0077749.1 MGP_BALBcJ_G0030762.1 mouse_genomes_project 6 54015524 54036076 - MGP_BALBcJ_P0077749 Kbtbd2 protein_coding protein_coding MGP_BALBcJ_T0077750.1 MGP_BALBcJ_G0030762.1 mouse_genomes_project 6 54015525 54036153 - MGP_BALBcJ_P0077750 Kbtbd2 protein_coding protein_coding MGP_BALBcJ_T0077751.1 MGP_BALBcJ_G0030762.1 mouse_genomes_project 6 54027378 54035619 - MGP_BALBcJ_P0077751 Kbtbd2 protein_coding protein_coding MGP_BALBcJ_T0077752.1 MGP_BALBcJ_G0030762.1 mouse_genomes_project 6 54027523 54035087 - Kbtbd2 protein_coding processed_transcript MGP_BALBcJ_T0102631.1 MGP_BALBcJ_G0040447.1 mouse_genomes_project 6 82987626 82990676 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0077726.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53312764 53604243 - MGP_BALBcJ_P0077726 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077727.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53314865 53804511 - MGP_BALBcJ_P0077727 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077728.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53315475 53603706 - Pde1c protein_coding processed_transcript MGP_BALBcJ_T0077729.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53321810 53604370 - MGP_BALBcJ_P0077729 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077730.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53325890 53613652 - MGP_BALBcJ_P0077730 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077731.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53326005 53367051 - MGP_BALBcJ_P0077731 Pde1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077732.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53326058 53613671 - MGP_BALBcJ_P0077732 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077733.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53344488 53604162 - MGP_BALBcJ_P0077733 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077734.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53348050 53613700 - MGP_BALBcJ_P0077734 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077735.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53349760 53604623 - MGP_BALBcJ_P0077735 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077736.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53350214 53604217 - MGP_BALBcJ_P0077736 Pde1c protein_coding protein_coding MGP_BALBcJ_T0077737.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53426028 53604225 - Pde1c protein_coding retained_intron MGP_BALBcJ_T0077738.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53583663 53604164 - Pde1c protein_coding retained_intron MGP_BALBcJ_T0077739.1 MGP_BALBcJ_G0030759.1 mouse_genomes_project 6 53586880 53613673 - Pde1c protein_coding retained_intron MGP_BALBcJ_T0079853.1 MGP_BALBcJ_G0031194.1 mouse_genomes_project 6 119132509 119148675 + MGP_BALBcJ_P0079853 Tuba8 protein_coding protein_coding MGP_BALBcJ_T0077753.1 MGP_BALBcJ_G0030763.1 mouse_genomes_project 6 54071155 54117843 + MGP_BALBcJ_P0077753 Fkbp9 protein_coding protein_coding MGP_BALBcJ_T0077754.1 MGP_BALBcJ_G0030763.1 mouse_genomes_project 6 54087572 54088900 + Fkbp9 protein_coding retained_intron MGP_BALBcJ_T0015360.1 MGP_BALBcJ_G0013457.1 mouse_genomes_project 6 62614180 62614612 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076788.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27473657 27514037 - MGP_BALBcJ_P0076788 Cep41 protein_coding protein_coding MGP_BALBcJ_T0076789.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27473659 27513981 - MGP_BALBcJ_P0076789 Cep41 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076790.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27474578 27513983 - MGP_BALBcJ_P0076790 Cep41 protein_coding protein_coding MGP_BALBcJ_T0076791.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27474579 27489481 - Cep41 protein_coding processed_transcript MGP_BALBcJ_T0076792.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27475732 27477010 - Cep41 protein_coding retained_intron MGP_BALBcJ_T0076793.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27478582 27481495 - Cep41 protein_coding retained_intron MGP_BALBcJ_T0076794.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27481107 27513376 - MGP_BALBcJ_P0076794 Cep41 protein_coding protein_coding MGP_BALBcJ_T0076795.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27486153 27513964 - MGP_BALBcJ_P0076795 Cep41 protein_coding protein_coding MGP_BALBcJ_T0076796.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27486439 27500658 - MGP_BALBcJ_P0076796 Cep41 protein_coding protein_coding MGP_BALBcJ_T0076797.1 MGP_BALBcJ_G0030526.1 mouse_genomes_project 6 27499212 27513988 - MGP_BALBcJ_P0076797 Cep41 protein_coding protein_coding MGP_BALBcJ_T0008535.1 MGP_BALBcJ_G0006905.1 mouse_genomes_project 6 31053355 31060517 + Gm13855 lincRNA lincRNA MGP_BALBcJ_T0080505.1 MGP_BALBcJ_G0031341.1 mouse_genomes_project 6 128426865 128444541 - MGP_BALBcJ_P0080505 Klra4 protein_coding protein_coding MGP_BALBcJ_T0008689.1 MGP_BALBcJ_G0007021.1 mouse_genomes_project 6 115451680 115460177 + Gm9946 lincRNA lincRNA MGP_BALBcJ_T0008690.1 MGP_BALBcJ_G0007021.1 mouse_genomes_project 6 115451680 115464313 + Gm9946 lincRNA lincRNA MGP_BALBcJ_T0008691.1 MGP_BALBcJ_G0007021.1 mouse_genomes_project 6 115459655 115460039 + Gm9946 lincRNA lincRNA MGP_BALBcJ_T0000288.1 MGP_BALBcJ_G0000229.1 mouse_genomes_project 6 66063833 66064132 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0098625.1 MGP_BALBcJ_G0036679.1 mouse_genomes_project 6 20391426 20391559 - Gm24217 rRNA rRNA MGP_BALBcJ_T0018193.1 MGP_BALBcJ_G0015563.1 mouse_genomes_project 6 13175307 13188012 - Gm43996 processed_transcript lincRNA MGP_BALBcJ_T0018194.1 MGP_BALBcJ_G0015563.1 mouse_genomes_project 6 13186298 13187966 - Gm43996 processed_transcript retained_intron MGP_BALBcJ_T0076537.1 MGP_BALBcJ_G0030481.1 mouse_genomes_project 6 21479056 21491006 + MGP_BALBcJ_P0076537 Hyal6 protein_coding protein_coding MGP_BALBcJ_T0080554.1 MGP_BALBcJ_G0031371.1 mouse_genomes_project 6 131202981 131204017 + MGP_BALBcJ_P0080554 Tas2r131 protein_coding protein_coding MGP_BALBcJ_T0080076.1 MGP_BALBcJ_G0031246.1 mouse_genomes_project 6 122894537 122896541 + MGP_BALBcJ_P0080076 Spsb2 protein_coding protein_coding MGP_BALBcJ_T0080077.1 MGP_BALBcJ_G0031246.1 mouse_genomes_project 6 122894761 122896213 + MGP_BALBcJ_P0080077 Spsb2 protein_coding protein_coding MGP_BALBcJ_T0080078.1 MGP_BALBcJ_G0031246.1 mouse_genomes_project 6 122894782 122896541 + MGP_BALBcJ_P0080078 Spsb2 protein_coding protein_coding MGP_BALBcJ_T0080079.1 MGP_BALBcJ_G0031246.1 mouse_genomes_project 6 122894795 122895815 + MGP_BALBcJ_P0080079 Spsb2 protein_coding protein_coding MGP_BALBcJ_T0080080.1 MGP_BALBcJ_G0031246.1 mouse_genomes_project 6 122895174 122896541 + MGP_BALBcJ_P0080080 Spsb2 protein_coding protein_coding MGP_BALBcJ_T0080864.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141136322 141172857 - MGP_BALBcJ_P0080864 Recql protein_coding protein_coding MGP_BALBcJ_T0080866.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141143088 141172895 - MGP_BALBcJ_P0080866 Recql protein_coding protein_coding MGP_BALBcJ_T0080867.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141143092 141153033 - MGP_BALBcJ_P0080867 Recql protein_coding protein_coding MGP_BALBcJ_T0080868.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141144001 141149804 - Recql protein_coding processed_transcript MGP_BALBcJ_T0080869.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141147517 141172908 - MGP_BALBcJ_P0080869 Recql protein_coding protein_coding MGP_BALBcJ_T0080870.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141148262 141149716 - MGP_BALBcJ_P0080870 Recql protein_coding protein_coding MGP_BALBcJ_T0080871.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141150864 141154808 - Recql protein_coding processed_transcript MGP_BALBcJ_T0080872.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141153562 141153974 - Recql protein_coding retained_intron MGP_BALBcJ_T0080873.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141161063 141172830 - MGP_BALBcJ_P0080873 Recql protein_coding protein_coding MGP_BALBcJ_T0080874.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141161063 141172795 - MGP_BALBcJ_P0080874 Recql protein_coding protein_coding MGP_BALBcJ_T0080875.1 MGP_BALBcJ_G0031444.1 mouse_genomes_project 6 141163162 141172903 - MGP_BALBcJ_P0080875 Recql protein_coding protein_coding MGP_BALBcJ_T0001990.1 MGP_BALBcJ_G0001903.1 mouse_genomes_project 6 54186096 54189080 - TEC TEC MGP_BALBcJ_T0079002.1 MGP_BALBcJ_G0031040.1 mouse_genomes_project 6 90800882 90973184 - MGP_BALBcJ_P0079002 Adamts9 protein_coding protein_coding MGP_BALBcJ_T0079003.1 MGP_BALBcJ_G0031040.1 mouse_genomes_project 6 90820803 90888755 - Adamts9 protein_coding retained_intron MGP_BALBcJ_T0079006.1 MGP_BALBcJ_G0031040.1 mouse_genomes_project 6 90873280 90888765 - Adamts9 protein_coding retained_intron MGP_BALBcJ_T0079007.1 MGP_BALBcJ_G0031040.1 mouse_genomes_project 6 90880033 90882607 - Adamts9 protein_coding retained_intron MGP_BALBcJ_T0079009.1 MGP_BALBcJ_G0031040.1 mouse_genomes_project 6 90955877 90973521 - Adamts9 protein_coding processed_transcript MGP_BALBcJ_T0078868.1 MGP_BALBcJ_G0031016.1 mouse_genomes_project 6 88351893 88367956 + MGP_BALBcJ_P0078868 Zxdc protein_coding protein_coding MGP_BALBcJ_T0078869.1 MGP_BALBcJ_G0031016.1 mouse_genomes_project 6 88351895 88386340 + MGP_BALBcJ_P0078869 Zxdc protein_coding protein_coding MGP_BALBcJ_T0078870.1 MGP_BALBcJ_G0031016.1 mouse_genomes_project 6 88352009 88367087 + MGP_BALBcJ_P0078870 Zxdc protein_coding protein_coding MGP_BALBcJ_T0078871.1 MGP_BALBcJ_G0031016.1 mouse_genomes_project 6 88352014 88365975 + MGP_BALBcJ_P0078871 Zxdc protein_coding protein_coding MGP_BALBcJ_T0078872.1 MGP_BALBcJ_G0031016.1 mouse_genomes_project 6 88352019 88356953 + Zxdc protein_coding retained_intron MGP_BALBcJ_T0001949.1 MGP_BALBcJ_G0001862.1 mouse_genomes_project 6 36988146 36989860 + TEC TEC MGP_BALBcJ_T0008602.1 MGP_BALBcJ_G0006951.1 mouse_genomes_project 6 64990862 65014433 + Gm42889 lincRNA lincRNA MGP_BALBcJ_T0102597.1 MGP_BALBcJ_G0040413.1 mouse_genomes_project 6 31256035 31257014 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0076340.1 MGP_BALBcJ_G0030443.1 mouse_genomes_project 6 10486798 10492508 - MGP_BALBcJ_P0076340 Gpr85 protein_coding protein_coding MGP_BALBcJ_T0076341.1 MGP_BALBcJ_G0030443.1 mouse_genomes_project 6 10487408 10490860 - MGP_BALBcJ_P0076341 Gpr85 protein_coding protein_coding MGP_BALBcJ_T0076342.1 MGP_BALBcJ_G0030443.1 mouse_genomes_project 6 10487417 10489582 - MGP_BALBcJ_P0076342 Gpr85 protein_coding protein_coding MGP_BALBcJ_T0076343.1 MGP_BALBcJ_G0030443.1 mouse_genomes_project 6 10490414 10492061 - Gpr85 protein_coding processed_transcript MGP_BALBcJ_T0080175.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123128939 123133457 + MGP_BALBcJ_P0080175 Acrbp protein_coding protein_coding MGP_BALBcJ_T0080176.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123129198 123130748 + MGP_BALBcJ_P0080176 Acrbp protein_coding protein_coding MGP_BALBcJ_T0080177.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123129210 123142515 + MGP_BALBcJ_P0080177 Acrbp protein_coding protein_coding MGP_BALBcJ_T0080178.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123129218 123130800 + MGP_BALBcJ_P0080178 Acrbp protein_coding protein_coding MGP_BALBcJ_T0080179.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123129261 123142306 + MGP_BALBcJ_P0080179 Acrbp protein_coding unknown_likely_coding MGP_BALBcJ_T0080180.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123131106 123133456 + Acrbp protein_coding processed_transcript MGP_BALBcJ_T0080181.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123133064 123134471 + Acrbp protein_coding retained_intron MGP_BALBcJ_T0080182.1 MGP_BALBcJ_G0031261.1 mouse_genomes_project 6 123141436 123142490 + Acrbp protein_coding retained_intron MGP_BALBcJ_T0008631.1 MGP_BALBcJ_G0006975.1 mouse_genomes_project 6 82384964 82385410 + 4930504D19Rik lincRNA lincRNA MGP_BALBcJ_T0079823.1 MGP_BALBcJ_G0031190.1 mouse_genomes_project 6 118749503 118781173 + Bcl2l13 protein_coding retained_intron MGP_BALBcJ_T0079824.1 MGP_BALBcJ_G0031190.1 mouse_genomes_project 6 118749503 118778921 + MGP_BALBcJ_P0079824 Bcl2l13 protein_coding protein_coding MGP_BALBcJ_T0079825.1 MGP_BALBcJ_G0031190.1 mouse_genomes_project 6 118749517 118789760 + MGP_BALBcJ_P0079825 Bcl2l13 protein_coding protein_coding MGP_BALBcJ_T0079826.1 MGP_BALBcJ_G0031190.1 mouse_genomes_project 6 118749529 118806416 + MGP_BALBcJ_P0079826 Bcl2l13 protein_coding protein_coding MGP_BALBcJ_T0078341.1 MGP_BALBcJ_G0030908.1 mouse_genomes_project 6 81143435 81151833 + Mob1a protein_coding processed_transcript MGP_BALBcJ_T0078342.1 MGP_BALBcJ_G0030908.1 mouse_genomes_project 6 81143453 81149841 + MGP_BALBcJ_P0078342 Mob1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078343.1 MGP_BALBcJ_G0030908.1 mouse_genomes_project 6 81143497 81163171 + MGP_BALBcJ_P0078343 Mob1a protein_coding protein_coding MGP_BALBcJ_T0078344.1 MGP_BALBcJ_G0030908.1 mouse_genomes_project 6 81143671 81163096 + MGP_BALBcJ_P0078344 Mob1a protein_coding protein_coding MGP_BALBcJ_T0008651.1 MGP_BALBcJ_G0006989.1 mouse_genomes_project 6 88437915 88439673 - Gm44117 lincRNA lincRNA MGP_BALBcJ_T0079965.1 MGP_BALBcJ_G0031221.1 mouse_genomes_project 6 121276087 121288629 + MGP_BALBcJ_P0079965 Clec4n protein_coding protein_coding MGP_BALBcJ_T0079966.1 MGP_BALBcJ_G0031221.1 mouse_genomes_project 6 121276098 121288627 + MGP_BALBcJ_P0079966 Clec4n protein_coding protein_coding MGP_BALBcJ_T0079967.1 MGP_BALBcJ_G0031221.1 mouse_genomes_project 6 121276101 121277074 + Clec4n protein_coding processed_transcript MGP_BALBcJ_T0079968.1 MGP_BALBcJ_G0031221.1 mouse_genomes_project 6 121276101 121288627 + MGP_BALBcJ_P0079968 Clec4n protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079969.1 MGP_BALBcJ_G0031221.1 mouse_genomes_project 6 121276101 121288627 + MGP_BALBcJ_P0079969 Clec4n protein_coding protein_coding MGP_BALBcJ_T0079970.1 MGP_BALBcJ_G0031221.1 mouse_genomes_project 6 121276262 121288193 + MGP_BALBcJ_P0079970 Clec4n protein_coding protein_coding MGP_BALBcJ_T0076388.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14051590 14085196 + MGP_BALBcJ_P0076388 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076389.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14051600 14084301 + MGP_BALBcJ_P0076389 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076390.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14051665 14083168 + MGP_BALBcJ_P0076390 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076391.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14051666 14072667 + Cav1 protein_coding processed_transcript MGP_BALBcJ_T0076392.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14051666 14083223 + MGP_BALBcJ_P0076392 Cav1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076393.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14051678 14053435 + MGP_BALBcJ_P0076393 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076394.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14052279 14083025 + MGP_BALBcJ_P0076394 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076395.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14052509 14083391 + MGP_BALBcJ_P0076395 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076396.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14052871 14085324 + MGP_BALBcJ_P0076396 Cav1 protein_coding protein_coding MGP_BALBcJ_T0076397.1 MGP_BALBcJ_G0030451.1 mouse_genomes_project 6 14052954 14072658 + Cav1 protein_coding processed_transcript MGP_BALBcJ_T0079142.1 MGP_BALBcJ_G0031069.1 mouse_genomes_project 6 99228209 99458458 - MGP_BALBcJ_P0079142 Pdzrn3 protein_coding protein_coding MGP_BALBcJ_T0079143.1 MGP_BALBcJ_G0031069.1 mouse_genomes_project 6 99235574 99435920 - Pdzrn3 protein_coding processed_transcript MGP_BALBcJ_T0079144.1 MGP_BALBcJ_G0031069.1 mouse_genomes_project 6 99248339 99277663 - Pdzrn3 protein_coding retained_intron MGP_BALBcJ_T0079145.1 MGP_BALBcJ_G0031069.1 mouse_genomes_project 6 99258361 99457903 - Pdzrn3 protein_coding processed_transcript MGP_BALBcJ_T0005070.1 MGP_BALBcJ_G0004329.1 mouse_genomes_project 6 126474792 126477361 + Gm26770 antisense antisense MGP_BALBcJ_T0011656.1 MGP_BALBcJ_G0009781.1 mouse_genomes_project 6 144083639 144083969 - Gm22793 misc_RNA misc_RNA MGP_BALBcJ_T0102615.1 MGP_BALBcJ_G0040431.1 mouse_genomes_project 6 55162252 55162754 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008499.1 MGP_BALBcJ_G0006880.1 mouse_genomes_project 6 15981501 16012154 - 4930524B17Rik lincRNA lincRNA MGP_BALBcJ_T0011647.1 MGP_BALBcJ_G0009772.1 mouse_genomes_project 6 113655110 113655360 - Gm27853 misc_RNA misc_RNA MGP_BALBcJ_T0080497.1 MGP_BALBcJ_G0031338.1 mouse_genomes_project 6 127986416 127995681 - MGP_BALBcJ_P0080497 Gm156 protein_coding protein_coding MGP_BALBcJ_T0080498.1 MGP_BALBcJ_G0031338.1 mouse_genomes_project 6 127986424 128008096 - MGP_BALBcJ_P0080498 Gm156 protein_coding protein_coding MGP_BALBcJ_T0077516.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47329884 47334507 - Dfna5 protein_coding retained_intron MGP_BALBcJ_T0077517.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47330361 47404286 - MGP_BALBcJ_P0077517 Dfna5 protein_coding protein_coding MGP_BALBcJ_T0077519.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47341092 47404278 - MGP_BALBcJ_P0077519 Dfna5 protein_coding protein_coding MGP_BALBcJ_T0077520.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47348268 47406393 - MGP_BALBcJ_P0077520 Dfna5 protein_coding protein_coding MGP_BALBcJ_T0077521.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47348270 47404300 - MGP_BALBcJ_P0077521 Dfna5 protein_coding protein_coding MGP_BALBcJ_T0077522.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47387424 47404557 - MGP_BALBcJ_P0077522 Dfna5 protein_coding protein_coding MGP_BALBcJ_T0077523.1 MGP_BALBcJ_G0030709.1 mouse_genomes_project 6 47401911 47404506 - Dfna5 protein_coding retained_intron MGP_BALBcJ_T0079947.1 MGP_BALBcJ_G0031213.1 mouse_genomes_project 6 120909475 120918504 - MGP_BALBcJ_P0079947 C3ar1 protein_coding protein_coding MGP_BALBcJ_T0079982.1 MGP_BALBcJ_G0031225.1 mouse_genomes_project 6 121357537 121383583 + MGP_BALBcJ_P0079982 protein_coding protein_coding MGP_BALBcJ_T0079155.1 MGP_BALBcJ_G0031072.1 mouse_genomes_project 6 102526323 102686525 + MGP_BALBcJ_P0079155 Cntn6 protein_coding protein_coding MGP_BALBcJ_T0079156.1 MGP_BALBcJ_G0031072.1 mouse_genomes_project 6 102526587 102606867 + Cntn6 protein_coding retained_intron MGP_BALBcJ_T0079157.1 MGP_BALBcJ_G0031072.1 mouse_genomes_project 6 102580857 102912451 + MGP_BALBcJ_P0079157 Cntn6 protein_coding protein_coding MGP_BALBcJ_T0080012.1 MGP_BALBcJ_G0031236.1 mouse_genomes_project 6 122670343 122702740 - MGP_BALBcJ_P0080012 protein_coding protein_coding MGP_BALBcJ_T0098633.1 MGP_BALBcJ_G0036687.1 mouse_genomes_project 6 110255933 110256033 - n-R5s165 rRNA rRNA MGP_BALBcJ_T0098627.1 MGP_BALBcJ_G0036681.1 mouse_genomes_project 6 27196605 27196719 + n-R5s161 rRNA rRNA MGP_BALBcJ_T0015613.1 MGP_BALBcJ_G0013710.1 mouse_genomes_project 6 130748017 130748506 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005062.1 MGP_BALBcJ_G0004322.1 mouse_genomes_project 6 124802531 124825452 + Gm26673 antisense antisense MGP_BALBcJ_T0080501.1 MGP_BALBcJ_G0031340.1 mouse_genomes_project 6 128100847 128105154 - Klra5 protein_coding retained_intron MGP_BALBcJ_T0080502.1 MGP_BALBcJ_G0031340.1 mouse_genomes_project 6 128100847 128123045 - MGP_BALBcJ_P0080502 Klra5 protein_coding protein_coding MGP_BALBcJ_T0080503.1 MGP_BALBcJ_G0031340.1 mouse_genomes_project 6 128100847 128114630 - MGP_BALBcJ_P0080503 Klra5 protein_coding protein_coding MGP_BALBcJ_T0080504.1 MGP_BALBcJ_G0031340.1 mouse_genomes_project 6 128101010 128114572 - MGP_BALBcJ_P0080504 Klra5 protein_coding protein_coding MGP_BALBcJ_T0004914.1 MGP_BALBcJ_G0004222.1 mouse_genomes_project 6 36369754 36370770 + Gm10244 antisense antisense MGP_BALBcJ_T0004915.1 MGP_BALBcJ_G0004222.1 mouse_genomes_project 6 36370245 36371162 + Gm10244 antisense antisense MGP_BALBcJ_T0098637.1 MGP_BALBcJ_G0036691.1 mouse_genomes_project 6 139117359 139117463 + n-R5s168 rRNA rRNA MGP_BALBcJ_T0015659.1 MGP_BALBcJ_G0013756.1 mouse_genomes_project 6 148115066 148115511 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080889.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141368266 141483333 - MGP_BALBcJ_P0080889 Abcc9 protein_coding protein_coding MGP_BALBcJ_T0080890.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141368266 141483277 - MGP_BALBcJ_P0080890 Abcc9 protein_coding protein_coding MGP_BALBcJ_T0080891.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141368266 141483333 - MGP_BALBcJ_P0080891 Abcc9 protein_coding protein_coding MGP_BALBcJ_T0080892.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141369535 141483277 - MGP_BALBcJ_P0080892 Abcc9 protein_coding protein_coding MGP_BALBcJ_T0080893.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141374408 141483332 - MGP_BALBcJ_P0080893 Abcc9 protein_coding protein_coding MGP_BALBcJ_T0080894.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141413940 141482492 - MGP_BALBcJ_P0080894 Abcc9 protein_coding unknown_likely_coding MGP_BALBcJ_T0080895.1 MGP_BALBcJ_G0031450.1 mouse_genomes_project 6 141473078 141483374 - MGP_BALBcJ_P0080895 Abcc9 protein_coding protein_coding MGP_BALBcJ_T0079239.1 MGP_BALBcJ_G0031090.1 mouse_genomes_project 6 110730139 110962555 - MGP_BALBcJ_P0079239 Srgap3 protein_coding protein_coding MGP_BALBcJ_T0079240.1 MGP_BALBcJ_G0031090.1 mouse_genomes_project 6 110730142 110962043 - MGP_BALBcJ_P0079240 Srgap3 protein_coding protein_coding MGP_BALBcJ_T0079241.1 MGP_BALBcJ_G0031090.1 mouse_genomes_project 6 110751036 110779283 - MGP_BALBcJ_P0079241 Srgap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079242.1 MGP_BALBcJ_G0031090.1 mouse_genomes_project 6 110778909 110962555 - Srgap3 protein_coding retained_intron MGP_BALBcJ_T0079243.1 MGP_BALBcJ_G0031090.1 mouse_genomes_project 6 110808772 110842605 - Srgap3 protein_coding retained_intron MGP_BALBcJ_T0015278.1 MGP_BALBcJ_G0013375.1 mouse_genomes_project 6 35304342 35304763 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078270.1 MGP_BALBcJ_G0030893.1 mouse_genomes_project 6 80871923 80873825 - MGP_BALBcJ_P0078270 Tlx2 protein_coding protein_coding MGP_BALBcJ_T0078271.1 MGP_BALBcJ_G0030893.1 mouse_genomes_project 6 80872190 80873893 - MGP_BALBcJ_P0078271 Tlx2 protein_coding protein_coding MGP_BALBcJ_T0008684.1 MGP_BALBcJ_G0007016.1 mouse_genomes_project 6 111750790 111751719 + Gm44053 lincRNA lincRNA MGP_BALBcJ_T0008737.1 MGP_BALBcJ_G0007057.1 mouse_genomes_project 6 138366368 138368497 - Gm44272 lincRNA lincRNA MGP_BALBcJ_T0002024.1 MGP_BALBcJ_G0001937.1 mouse_genomes_project 6 75798082 75800135 + TEC TEC MGP_BALBcJ_T0102596.1 MGP_BALBcJ_G0040412.1 mouse_genomes_project 6 31250038 31257358 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0079503.1 MGP_BALBcJ_G0031133.1 mouse_genomes_project 6 113634131 113664010 - MGP_BALBcJ_P0079503 Tmem40 protein_coding protein_coding MGP_BALBcJ_T0079504.1 MGP_BALBcJ_G0031133.1 mouse_genomes_project 6 113634143 113639696 - Tmem40 protein_coding processed_transcript MGP_BALBcJ_T0079505.1 MGP_BALBcJ_G0031133.1 mouse_genomes_project 6 113634526 113669557 - MGP_BALBcJ_P0079505 Tmem40 protein_coding protein_coding MGP_BALBcJ_T0079506.1 MGP_BALBcJ_G0031133.1 mouse_genomes_project 6 113634533 113640038 - Tmem40 protein_coding retained_intron MGP_BALBcJ_T0001935.1 MGP_BALBcJ_G0001848.1 mouse_genomes_project 6 25356744 25359659 + TEC TEC MGP_BALBcJ_T0000295.1 MGP_BALBcJ_G0000236.1 mouse_genomes_project 6 66522696 66523099 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008563.1 MGP_BALBcJ_G0006922.1 mouse_genomes_project 6 45879514 45880546 + 4833403J16Rik lincRNA lincRNA MGP_BALBcJ_T0076543.1 MGP_BALBcJ_G0030484.1 mouse_genomes_project 6 21609373 21639180 + MGP_BALBcJ_P0076543 Hyal5 protein_coding protein_coding MGP_BALBcJ_T0076544.1 MGP_BALBcJ_G0030484.1 mouse_genomes_project 6 21628241 21639027 + MGP_BALBcJ_P0076544 Hyal5 protein_coding protein_coding MGP_BALBcJ_T0076545.1 MGP_BALBcJ_G0030484.1 mouse_genomes_project 6 21637758 21638967 + Hyal5 protein_coding processed_transcript MGP_BALBcJ_T0099998.1 MGP_BALBcJ_G0038034.1 mouse_genomes_project 6 36208198 36208297 - Gm26008 snRNA snRNA MGP_BALBcJ_T0015452.1 MGP_BALBcJ_G0013549.1 mouse_genomes_project 6 83808689 83813956 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008686.1 MGP_BALBcJ_G0007018.1 mouse_genomes_project 6 115051671 115053707 + D030044L04Rik lincRNA lincRNA MGP_BALBcJ_T0004938.1 MGP_BALBcJ_G0004238.1 mouse_genomes_project 6 49508393 49514844 - Evx1os antisense antisense MGP_BALBcJ_T0004939.1 MGP_BALBcJ_G0004238.1 mouse_genomes_project 6 49510840 49513517 - Evx1os antisense antisense MGP_BALBcJ_T0077146.1 MGP_BALBcJ_G0030597.1 mouse_genomes_project 6 37535175 37546862 - MGP_BALBcJ_P0077146 Clec5a protein_coding protein_coding MGP_BALBcJ_T0077147.1 MGP_BALBcJ_G0030597.1 mouse_genomes_project 6 37536998 37546880 - Clec5a protein_coding processed_transcript MGP_BALBcJ_T0077148.1 MGP_BALBcJ_G0030597.1 mouse_genomes_project 6 37538131 37546854 - MGP_BALBcJ_P0077148 Clec5a protein_coding protein_coding MGP_BALBcJ_T0077149.1 MGP_BALBcJ_G0030597.1 mouse_genomes_project 6 37538241 37546849 - MGP_BALBcJ_P0077149 Clec5a protein_coding protein_coding MGP_BALBcJ_T0015496.1 MGP_BALBcJ_G0013593.1 mouse_genomes_project 6 102017980 102018360 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000284.1 MGP_BALBcJ_G0000225.1 mouse_genomes_project 6 65913586 65914051 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0004948.1 MGP_BALBcJ_G0004247.1 mouse_genomes_project 6 63235462 63246150 - Gm16838 antisense antisense MGP_BALBcJ_T0079420.1 MGP_BALBcJ_G0031119.1 mouse_genomes_project 6 112161801 112280324 + MGP_BALBcJ_P0079420 Slc6a11 protein_coding protein_coding MGP_BALBcJ_T0079421.1 MGP_BALBcJ_G0031119.1 mouse_genomes_project 6 112161979 112162996 + Slc6a11 protein_coding retained_intron MGP_BALBcJ_T0001922.1 MGP_BALBcJ_G0001835.1 mouse_genomes_project 6 14491348 14492727 - TEC TEC MGP_BALBcJ_T0076671.1 MGP_BALBcJ_G0030510.1 mouse_genomes_project 6 26325725 26336421 + MGP_BALBcJ_P0076671 Irf5 protein_coding protein_coding MGP_BALBcJ_T0076672.1 MGP_BALBcJ_G0030510.1 mouse_genomes_project 6 26325808 26341030 + MGP_BALBcJ_P0076672 Irf5 protein_coding protein_coding MGP_BALBcJ_T0076673.1 MGP_BALBcJ_G0030510.1 mouse_genomes_project 6 26327370 26333099 + MGP_BALBcJ_P0076673 Irf5 protein_coding protein_coding MGP_BALBcJ_T0076674.1 MGP_BALBcJ_G0030510.1 mouse_genomes_project 6 26328382 26336421 + MGP_BALBcJ_P0076674 Irf5 protein_coding protein_coding MGP_BALBcJ_T0076675.1 MGP_BALBcJ_G0030510.1 mouse_genomes_project 6 26330349 26334448 + MGP_BALBcJ_P0076675 Irf5 protein_coding protein_coding MGP_BALBcJ_T0076679.1 MGP_BALBcJ_G0030510.1 mouse_genomes_project 6 26340305 26341017 + Irf5 protein_coding processed_transcript MGP_BALBcJ_T0079571.1 MGP_BALBcJ_G0031145.1 mouse_genomes_project 6 114193692 114236344 + MGP_BALBcJ_P0079571 Zfand4 protein_coding protein_coding MGP_BALBcJ_T0004968.1 MGP_BALBcJ_G0004261.1 mouse_genomes_project 6 80926569 80928452 + Gm44287 antisense antisense MGP_BALBcJ_T0002044.1 MGP_BALBcJ_G0001957.1 mouse_genomes_project 6 84415227 84416980 + TEC TEC MGP_BALBcJ_T0081077.1 MGP_BALBcJ_G0031480.1 mouse_genomes_project 6 145841574 145850513 - MGP_BALBcJ_P0081077 Mansc4 protein_coding protein_coding MGP_BALBcJ_T0081078.1 MGP_BALBcJ_G0031480.1 mouse_genomes_project 6 145844932 145850482 - MGP_BALBcJ_P0081078 Mansc4 protein_coding protein_coding MGP_BALBcJ_T0098994.1 MGP_BALBcJ_G0037037.1 mouse_genomes_project 6 81797424 81800197 + Gm43920 sense_intronic sense_intronic MGP_BALBcJ_T0078690.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85708418 85731158 - MGP_BALBcJ_P0078690 Rab43 protein_coding protein_coding MGP_BALBcJ_T0078691.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85708418 85729133 - MGP_BALBcJ_P0078691 Rab43 protein_coding protein_coding MGP_BALBcJ_T0078693.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85708430 85709641 - Rab43 protein_coding processed_transcript MGP_BALBcJ_T0078694.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85711069 85729136 - Rab43 protein_coding processed_transcript MGP_BALBcJ_T0078695.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85711620 85731543 - Rab43 protein_coding processed_transcript MGP_BALBcJ_T0078697.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85712266 85731477 - Rab43 protein_coding processed_transcript MGP_BALBcJ_T0078698.1 MGP_BALBcJ_G0030977.1 mouse_genomes_project 6 85713437 85731158 - MGP_BALBcJ_P0078698 Rab43 protein_coding protein_coding MGP_BALBcJ_T0001903.1 MGP_BALBcJ_G0001816.1 mouse_genomes_project 6 1197984 1198709 - TEC TEC MGP_BALBcJ_T0078208.1 MGP_BALBcJ_G0030881.1 mouse_genomes_project 6 79760620 79768970 - MGP_BALBcJ_P0078208 Mrpl19 protein_coding protein_coding MGP_BALBcJ_T0078209.1 MGP_BALBcJ_G0030881.1 mouse_genomes_project 6 79764960 79765834 - Mrpl19 protein_coding retained_intron MGP_BALBcJ_T0078210.1 MGP_BALBcJ_G0030881.1 mouse_genomes_project 6 79765397 79768619 - Mrpl19 protein_coding processed_transcript MGP_BALBcJ_T0076533.1 MGP_BALBcJ_G0030480.1 mouse_genomes_project 6 21360684 21412929 - MGP_BALBcJ_P0076533 Wasl protein_coding protein_coding MGP_BALBcJ_T0076534.1 MGP_BALBcJ_G0030480.1 mouse_genomes_project 6 21373534 21374945 - Wasl protein_coding retained_intron MGP_BALBcJ_T0076535.1 MGP_BALBcJ_G0030480.1 mouse_genomes_project 6 21379556 21412908 - MGP_BALBcJ_P0076535 Wasl protein_coding protein_coding MGP_BALBcJ_T0076536.1 MGP_BALBcJ_G0030480.1 mouse_genomes_project 6 21385094 21412858 - Wasl protein_coding processed_transcript MGP_BALBcJ_T0078852.1 MGP_BALBcJ_G0031006.1 mouse_genomes_project 6 87897763 87921311 - MGP_BALBcJ_P0078852 Vmn1r45 protein_coding protein_coding MGP_BALBcJ_T0102663.1 MGP_BALBcJ_G0040478.1 mouse_genomes_project 6 131349536 131350529 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015311.1 MGP_BALBcJ_G0013408.1 mouse_genomes_project 6 46114927 46116017 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076375.1 MGP_BALBcJ_G0030448.1 mouse_genomes_project 6 13570970 13635455 - MGP_BALBcJ_P0076375 Tfec protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076376.1 MGP_BALBcJ_G0030448.1 mouse_genomes_project 6 13571535 13604798 - MGP_BALBcJ_P0076376 Tfec protein_coding protein_coding MGP_BALBcJ_T0076377.1 MGP_BALBcJ_G0030448.1 mouse_genomes_project 6 13572275 13572847 - MGP_BALBcJ_P0076377 Tfec protein_coding protein_coding MGP_BALBcJ_T0076378.1 MGP_BALBcJ_G0030448.1 mouse_genomes_project 6 13578990 13635497 - Tfec protein_coding retained_intron MGP_BALBcJ_T0076379.1 MGP_BALBcJ_G0030448.1 mouse_genomes_project 6 13581771 13583571 - Tfec protein_coding retained_intron MGP_BALBcJ_T0004944.1 MGP_BALBcJ_G0004243.1 mouse_genomes_project 6 52530156 52541752 - Gm44073 antisense antisense MGP_BALBcJ_T0077207.1 MGP_BALBcJ_G0030627.1 mouse_genomes_project 6 39233667 39236253 + MGP_BALBcJ_P0077207 Tmem139 protein_coding protein_coding MGP_BALBcJ_T0079705.1 MGP_BALBcJ_G0031172.1 mouse_genomes_project 6 117205711 117221357 - MGP_BALBcJ_P0079705 Lrtm2 protein_coding protein_coding MGP_BALBcJ_T0079706.1 MGP_BALBcJ_G0031172.1 mouse_genomes_project 6 117205711 117219796 - MGP_BALBcJ_P0079706 Lrtm2 protein_coding protein_coding MGP_BALBcJ_T0079707.1 MGP_BALBcJ_G0031172.1 mouse_genomes_project 6 117205711 117221348 - MGP_BALBcJ_P0079707 Lrtm2 protein_coding protein_coding MGP_BALBcJ_T0079708.1 MGP_BALBcJ_G0031172.1 mouse_genomes_project 6 117214242 117219796 - MGP_BALBcJ_P0079708 Lrtm2 protein_coding protein_coding MGP_BALBcJ_T0079035.1 MGP_BALBcJ_G0031046.1 mouse_genomes_project 6 93174581 93179224 + MGP_BALBcJ_P0079035 Kbtbd8 protein_coding protein_coding MGP_BALBcJ_T0079036.1 MGP_BALBcJ_G0031046.1 mouse_genomes_project 6 93175299 93184277 + MGP_BALBcJ_P0079036 Kbtbd8 protein_coding protein_coding MGP_BALBcJ_T0079037.1 MGP_BALBcJ_G0031046.1 mouse_genomes_project 6 93175324 93179131 + Kbtbd8 protein_coding processed_transcript MGP_BALBcJ_T0015599.1 MGP_BALBcJ_G0013696.1 mouse_genomes_project 6 128862459 128862580 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002144.1 MGP_BALBcJ_G0002056.1 mouse_genomes_project 6 126478053 126478520 + TEC TEC MGP_BALBcJ_T0080839.1 MGP_BALBcJ_G0031436.1 mouse_genomes_project 6 140508940 140568054 - MGP_BALBcJ_P0080839 Gm5724 protein_coding protein_coding MGP_BALBcJ_T0076304.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8600342 8629720 + MGP_BALBcJ_P0076304 Phf14 protein_coding protein_coding MGP_BALBcJ_T0076305.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8600417 8649620 + MGP_BALBcJ_P0076305 Phf14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076306.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8618825 8696364 + MGP_BALBcJ_P0076306 Phf14 protein_coding protein_coding MGP_BALBcJ_T0076307.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8618859 8696432 + MGP_BALBcJ_P0076307 Phf14 protein_coding protein_coding MGP_BALBcJ_T0076308.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8618860 8773142 + MGP_BALBcJ_P0076308 Phf14 protein_coding protein_coding MGP_BALBcJ_T0076309.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8623092 8674816 + MGP_BALBcJ_P0076309 Phf14 protein_coding protein_coding MGP_BALBcJ_T0076310.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8623583 8730957 + MGP_BALBcJ_P0076310 Phf14 protein_coding unknown_likely_coding MGP_BALBcJ_T0076311.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8675421 8677013 + Phf14 protein_coding retained_intron MGP_BALBcJ_T0076312.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8679229 8683667 + Phf14 protein_coding retained_intron MGP_BALBcJ_T0076313.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8695170 8773037 + MGP_BALBcJ_P0076313 Phf14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076314.1 MGP_BALBcJ_G0030437.1 mouse_genomes_project 6 8733251 8739158 + Phf14 protein_coding retained_intron MGP_BALBcJ_T0078518.1 MGP_BALBcJ_G0030945.1 mouse_genomes_project 6 83784370 83792202 - MGP_BALBcJ_P0078518 Nat8f1 protein_coding protein_coding MGP_BALBcJ_T0078519.1 MGP_BALBcJ_G0030945.1 mouse_genomes_project 6 83784378 83792181 - Nat8f1 protein_coding processed_transcript MGP_BALBcJ_T0078520.1 MGP_BALBcJ_G0030945.1 mouse_genomes_project 6 83786936 83792119 - MGP_BALBcJ_P0078520 Nat8f1 protein_coding protein_coding MGP_BALBcJ_T0000163.1 MGP_BALBcJ_G0000124.1 mouse_genomes_project 6 66470558 66471020 - MGP_BALBcJ_P0000163 Igkv12-89 IG_V_gene IG_V_gene MGP_BALBcJ_T0000164.1 MGP_BALBcJ_G0000124.1 mouse_genomes_project 6 66470558 66471020 - MGP_BALBcJ_P0000164 Igkv12-89 IG_V_gene IG_V_gene MGP_BALBcJ_T0076231.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2453271 2754379 + MGP_BALBcJ_P0076231 Dync1i1 protein_coding protein_coding MGP_BALBcJ_T0076232.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2453395 2754370 + MGP_BALBcJ_P0076232 Dync1i1 protein_coding protein_coding MGP_BALBcJ_T0076233.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2453423 2754379 + MGP_BALBcJ_P0076233 Dync1i1 protein_coding protein_coding MGP_BALBcJ_T0076234.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2453444 2754379 + MGP_BALBcJ_P0076234 Dync1i1 protein_coding protein_coding MGP_BALBcJ_T0076235.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2453450 2494589 + MGP_BALBcJ_P0076235 Dync1i1 protein_coding protein_coding MGP_BALBcJ_T0076236.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2484957 2512437 + MGP_BALBcJ_P0076236 Dync1i1 protein_coding protein_coding MGP_BALBcJ_T0076237.1 MGP_BALBcJ_G0030419.1 mouse_genomes_project 6 2732456 2754127 + Dync1i1 protein_coding retained_intron MGP_BALBcJ_T0102609.1 MGP_BALBcJ_G0040425.1 mouse_genomes_project 6 40161025 40161341 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0080561.1 MGP_BALBcJ_G0031378.1 mouse_genomes_project 6 131349454 131350612 - MGP_BALBcJ_P0080561 Tas2r117 protein_coding protein_coding MGP_BALBcJ_T0079721.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117468858 117749897 - MGP_BALBcJ_P0079721 Erc1 protein_coding protein_coding MGP_BALBcJ_T0079722.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117468866 117725377 - MGP_BALBcJ_P0079722 Erc1 protein_coding protein_coding MGP_BALBcJ_T0079723.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117470692 117749846 - MGP_BALBcJ_P0079723 Erc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079724.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117471770 117749806 - MGP_BALBcJ_P0079724 Erc1 protein_coding protein_coding MGP_BALBcJ_T0079725.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117472619 117749862 - MGP_BALBcJ_P0079725 Erc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079726.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117473054 117643354 - MGP_BALBcJ_P0079726 Erc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079727.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117473289 117749881 - MGP_BALBcJ_P0079727 Erc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079728.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117473359 117749914 - MGP_BALBcJ_P0079728 Erc1 protein_coding protein_coding MGP_BALBcJ_T0079729.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117473574 117749836 - MGP_BALBcJ_P0079729 Erc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079730.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117516761 117521573 - Erc1 protein_coding retained_intron MGP_BALBcJ_T0079731.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117518374 117749886 - MGP_BALBcJ_P0079731 Erc1 protein_coding unknown_likely_coding MGP_BALBcJ_T0079732.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117621369 117696929 - Erc1 protein_coding processed_transcript MGP_BALBcJ_T0079733.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117672537 117749849 - MGP_BALBcJ_P0079733 Erc1 protein_coding protein_coding MGP_BALBcJ_T0079734.1 MGP_BALBcJ_G0031176.1 mouse_genomes_project 6 117724135 117726611 - Erc1 protein_coding retained_intron MGP_BALBcJ_T0076546.1 MGP_BALBcJ_G0030485.1 mouse_genomes_project 6 21696268 21701424 - MGP_BALBcJ_P0076546 Tmem229a protein_coding protein_coding MGP_BALBcJ_T0015428.1 MGP_BALBcJ_G0013525.1 mouse_genomes_project 6 76294374 76294870 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078185.1 MGP_BALBcJ_G0030875.1 mouse_genomes_project 6 76210510 76213459 + MGP_BALBcJ_P0078185 Reg2 protein_coding protein_coding MGP_BALBcJ_T0078215.1 MGP_BALBcJ_G0030883.1 mouse_genomes_project 6 80191617 80194649 + Tacr1 protein_coding retained_intron MGP_BALBcJ_T0078216.1 MGP_BALBcJ_G0030883.1 mouse_genomes_project 6 80191758 80353208 + MGP_BALBcJ_P0078216 Tacr1 protein_coding protein_coding MGP_BALBcJ_T0078217.1 MGP_BALBcJ_G0030883.1 mouse_genomes_project 6 80192070 80353213 + MGP_BALBcJ_P0078217 Tacr1 protein_coding protein_coding MGP_BALBcJ_T0015580.1 MGP_BALBcJ_G0013677.1 mouse_genomes_project 6 126284708 126288629 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077811.1 MGP_BALBcJ_G0030793.1 mouse_genomes_project 6 55303929 55304949 - MGP_BALBcJ_P0077811 Vmn1r26 protein_coding protein_coding MGP_BALBcJ_T0015535.1 MGP_BALBcJ_G0013632.1 mouse_genomes_project 6 115367257 115367678 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015483.1 MGP_BALBcJ_G0013580.1 mouse_genomes_project 6 97903336 97903943 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098993.1 MGP_BALBcJ_G0037036.1 mouse_genomes_project 6 45148722 45149130 - sense_intronic sense_intronic MGP_BALBcJ_T0008629.1 MGP_BALBcJ_G0006973.1 mouse_genomes_project 6 82068007 82128461 + Gm44127 lincRNA lincRNA MGP_BALBcJ_T0002004.1 MGP_BALBcJ_G0001917.1 mouse_genomes_project 6 69580461 69581087 - TEC TEC MGP_BALBcJ_T0000152.1 MGP_BALBcJ_G0000116.1 mouse_genomes_project 6 66156379 66156852 + MGP_BALBcJ_P0000152 Igkv12-98 IG_V_gene IG_V_gene MGP_BALBcJ_T0000153.1 MGP_BALBcJ_G0000116.1 mouse_genomes_project 6 66156379 66156852 + MGP_BALBcJ_P0000153 Igkv12-98 IG_V_gene IG_V_gene MGP_BALBcJ_T0080763.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136942262 136961495 + MGP_BALBcJ_P0080763 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080764.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136942474 136961345 + MGP_BALBcJ_P0080764 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080765.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136942500 136961132 + MGP_BALBcJ_P0080765 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080766.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136942517 136961482 + MGP_BALBcJ_P0080766 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080767.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136942545 136961124 + MGP_BALBcJ_P0080767 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080768.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136943316 136961299 + MGP_BALBcJ_P0080768 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080769.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136943532 136961352 + MGP_BALBcJ_P0080769 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0080770.1 MGP_BALBcJ_G0031422.1 mouse_genomes_project 6 136944800 136955586 + MGP_BALBcJ_P0080770 Mgst1 protein_coding protein_coding MGP_BALBcJ_T0010730.1 MGP_BALBcJ_G0008855.1 mouse_genomes_project 6 19531643 19531740 - Gm23961 miRNA miRNA MGP_BALBcJ_T0015473.1 MGP_BALBcJ_G0013570.1 mouse_genomes_project 6 92916488 92916924 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077274.1 MGP_BALBcJ_G0030649.1 mouse_genomes_project 6 39898137 39899070 + MGP_BALBcJ_P0077274 Olfr447 protein_coding protein_coding MGP_BALBcJ_T0004980.1 MGP_BALBcJ_G0004266.1 mouse_genomes_project 6 81935868 81948710 - Gm15475 antisense antisense MGP_BALBcJ_T0008701.1 MGP_BALBcJ_G0007031.1 mouse_genomes_project 6 120411612 120412921 + 1700063H04Rik lincRNA lincRNA MGP_BALBcJ_T0077679.1 MGP_BALBcJ_G0030746.1 mouse_genomes_project 6 52043097 52120622 + MGP_BALBcJ_P0077679 protein_coding protein_coding MGP_BALBcJ_T0077680.1 MGP_BALBcJ_G0030746.1 mouse_genomes_project 6 52043451 52105531 + MGP_BALBcJ_P0077680 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077681.1 MGP_BALBcJ_G0030746.1 mouse_genomes_project 6 52043633 52112233 + MGP_BALBcJ_P0077681 protein_coding protein_coding MGP_BALBcJ_T0015290.1 MGP_BALBcJ_G0013387.1 mouse_genomes_project 6 39711515 39711947 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078846.1 MGP_BALBcJ_G0031001.1 mouse_genomes_project 6 87677640 87678573 + MGP_BALBcJ_P0078846 Vmn1r40 protein_coding protein_coding MGP_BALBcJ_T0002660.1 MGP_BALBcJ_G0002545.1 mouse_genomes_project 6 38119169 38119660 + MGP_BALBcJ_P0002660 Trbv16 TR_V_gene TR_V_gene MGP_BALBcJ_T0102623.1 MGP_BALBcJ_G0040439.1 mouse_genomes_project 6 55794802 55795727 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010755.1 MGP_BALBcJ_G0008880.1 mouse_genomes_project 6 67182504 67182563 + miRNA miRNA MGP_BALBcJ_T0101272.1 MGP_BALBcJ_G0039308.1 mouse_genomes_project 6 81672457 81672587 - Gm23014 snoRNA snoRNA MGP_BALBcJ_T0101249.1 MGP_BALBcJ_G0039285.1 mouse_genomes_project 6 40951821 40951952 + Gm22939 snoRNA snoRNA MGP_BALBcJ_T0005005.1 MGP_BALBcJ_G0004280.1 mouse_genomes_project 6 86438519 86439192 + Gm44170 antisense antisense MGP_BALBcJ_T0077694.1 MGP_BALBcJ_G0030749.1 mouse_genomes_project 6 52271887 52313228 + MGP_BALBcJ_P0077694 Gars protein_coding protein_coding MGP_BALBcJ_T0077695.1 MGP_BALBcJ_G0030749.1 mouse_genomes_project 6 52281934 52284827 + Gars protein_coding retained_intron MGP_BALBcJ_T0077696.1 MGP_BALBcJ_G0030749.1 mouse_genomes_project 6 52283955 52294734 + Gars protein_coding retained_intron MGP_BALBcJ_T0100007.1 MGP_BALBcJ_G0038043.1 mouse_genomes_project 6 63335157 63335263 - Gm23543 snRNA snRNA MGP_BALBcJ_T0015647.1 MGP_BALBcJ_G0013744.1 mouse_genomes_project 6 145410553 145410901 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098998.1 MGP_BALBcJ_G0037041.1 mouse_genomes_project 6 97438974 97442867 - Gm20705 sense_intronic sense_intronic MGP_BALBcJ_T0004985.1 MGP_BALBcJ_G0004271.1 mouse_genomes_project 6 84380025 84391026 - A430078I02Rik antisense antisense MGP_BALBcJ_T0004986.1 MGP_BALBcJ_G0004271.1 mouse_genomes_project 6 84380553 84391086 - A430078I02Rik antisense antisense MGP_BALBcJ_T0015234.1 MGP_BALBcJ_G0013331.1 mouse_genomes_project 6 12806474 12806748 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076521.1 MGP_BALBcJ_G0030475.1 mouse_genomes_project 6 20822541 20917069 - MGP_BALBcJ_P0076521 Slc13a1 protein_coding protein_coding MGP_BALBcJ_T0076522.1 MGP_BALBcJ_G0030475.1 mouse_genomes_project 6 20822808 20845771 - Slc13a1 protein_coding processed_transcript MGP_BALBcJ_T0076523.1 MGP_BALBcJ_G0030475.1 mouse_genomes_project 6 20842471 20845768 - Slc13a1 protein_coding retained_intron MGP_BALBcJ_T0076524.1 MGP_BALBcJ_G0030475.1 mouse_genomes_project 6 20873248 20917067 - Slc13a1 protein_coding retained_intron MGP_BALBcJ_T0008587.1 MGP_BALBcJ_G0006939.1 mouse_genomes_project 6 50425794 50429625 + Gm4872 lincRNA lincRNA MGP_BALBcJ_T0015624.1 MGP_BALBcJ_G0013721.1 mouse_genomes_project 6 132521610 132522279 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008580.1 MGP_BALBcJ_G0006935.1 mouse_genomes_project 6 49296528 49306083 + Halr1 lincRNA lincRNA MGP_BALBcJ_T0008581.1 MGP_BALBcJ_G0006935.1 mouse_genomes_project 6 49296573 49307247 + Halr1 lincRNA lincRNA MGP_BALBcJ_T0008582.1 MGP_BALBcJ_G0006935.1 mouse_genomes_project 6 49296582 49305746 + Halr1 lincRNA lincRNA MGP_BALBcJ_T0078611.1 MGP_BALBcJ_G0030959.1 mouse_genomes_project 6 84564741 84586882 - MGP_BALBcJ_P0078611 Mxd1 protein_coding protein_coding MGP_BALBcJ_T0078612.1 MGP_BALBcJ_G0030959.1 mouse_genomes_project 6 84566715 84580822 - MGP_BALBcJ_P0078612 Mxd1 protein_coding protein_coding MGP_BALBcJ_T0078613.1 MGP_BALBcJ_G0030959.1 mouse_genomes_project 6 84568498 84586821 - MGP_BALBcJ_P0078613 Mxd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078614.1 MGP_BALBcJ_G0030959.1 mouse_genomes_project 6 84583922 84586838 - Mxd1 protein_coding retained_intron MGP_BALBcJ_T0101744.1 MGP_BALBcJ_G0039708.1 mouse_genomes_project 6 63728871 63749123 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101745.1 MGP_BALBcJ_G0039708.1 mouse_genomes_project 6 63737524 63750229 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101746.1 MGP_BALBcJ_G0039708.1 mouse_genomes_project 6 63748890 63749623 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0015268.1 MGP_BALBcJ_G0013365.1 mouse_genomes_project 6 30222700 30224811 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002718.1 MGP_BALBcJ_G0002594.1 mouse_genomes_project 6 38227650 38227927 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0001907.1 MGP_BALBcJ_G0001820.1 mouse_genomes_project 6 1492643 1494502 + TEC TEC MGP_BALBcJ_T0005045.1 MGP_BALBcJ_G0004306.1 mouse_genomes_project 6 113354743 113368134 - Gm44079 antisense antisense MGP_BALBcJ_T0076287.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5350785 5492510 - MGP_BALBcJ_P0076287 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076288.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5350785 5492795 - MGP_BALBcJ_P0076288 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076289.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5350785 5492840 - MGP_BALBcJ_P0076289 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076290.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5350785 5472496 - MGP_BALBcJ_P0076290 Ica1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076291.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5350957 5367167 - Ica1 protein_coding processed_transcript MGP_BALBcJ_T0076292.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5378260 5492510 - MGP_BALBcJ_P0076292 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076293.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5378967 5392202 - MGP_BALBcJ_P0076293 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076294.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5378977 5492843 - MGP_BALBcJ_P0076294 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076295.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5378978 5451217 - MGP_BALBcJ_P0076295 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076296.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5444569 5492844 - Ica1 protein_coding processed_transcript MGP_BALBcJ_T0076297.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5463825 5484898 - MGP_BALBcJ_P0076297 Ica1 protein_coding protein_coding MGP_BALBcJ_T0076298.1 MGP_BALBcJ_G0030434.1 mouse_genomes_project 6 5468730 5492479 - MGP_BALBcJ_P0076298 Ica1 protein_coding protein_coding MGP_BALBcJ_T0011597.1 MGP_BALBcJ_G0009722.1 mouse_genomes_project 6 1090618 1090945 + Gm24442 misc_RNA misc_RNA MGP_BALBcJ_T0005021.1 MGP_BALBcJ_G0004290.1 mouse_genomes_project 6 96168516 96295550 + Gm32592 antisense antisense MGP_BALBcJ_T0077199.1 MGP_BALBcJ_G0030623.1 mouse_genomes_project 6 39013470 39017890 + MGP_BALBcJ_P0077199 Sva protein_coding protein_coding MGP_BALBcJ_T0077200.1 MGP_BALBcJ_G0030623.1 mouse_genomes_project 6 39013470 39017896 + MGP_BALBcJ_P0077200 Sva protein_coding protein_coding MGP_BALBcJ_T0002049.1 MGP_BALBcJ_G0001962.1 mouse_genomes_project 6 84882777 84884579 + TEC TEC MGP_BALBcJ_T0078707.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85762357 85770901 - MGP_BALBcJ_P0078707 Cnbp protein_coding protein_coding MGP_BALBcJ_T0078708.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85762357 85770901 - MGP_BALBcJ_P0078708 Cnbp protein_coding protein_coding MGP_BALBcJ_T0078709.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85762824 85770875 - MGP_BALBcJ_P0078709 Cnbp protein_coding protein_coding MGP_BALBcJ_T0078710.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85762824 85770825 - MGP_BALBcJ_P0078710 Cnbp protein_coding protein_coding MGP_BALBcJ_T0078711.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85763629 85770855 - MGP_BALBcJ_P0078711 Cnbp protein_coding protein_coding MGP_BALBcJ_T0078712.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85763661 85770822 - Cnbp protein_coding retained_intron MGP_BALBcJ_T0078713.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85763681 85770817 - Cnbp protein_coding retained_intron MGP_BALBcJ_T0078714.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85763742 85770854 - Cnbp protein_coding retained_intron MGP_BALBcJ_T0078715.1 MGP_BALBcJ_G0030980.1 mouse_genomes_project 6 85765272 85766062 - Cnbp protein_coding retained_intron MGP_BALBcJ_T0002077.1 MGP_BALBcJ_G0001990.1 mouse_genomes_project 6 89677168 89678194 - TEC TEC MGP_BALBcJ_T0015525.1 MGP_BALBcJ_G0013622.1 mouse_genomes_project 6 112656340 112656773 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015522.1 MGP_BALBcJ_G0013619.1 mouse_genomes_project 6 112092530 112092582 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101959.1 MGP_BALBcJ_G0039816.1 mouse_genomes_project 6 129506212 129520965 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0015501.1 MGP_BALBcJ_G0013598.1 mouse_genomes_project 6 105359613 105359839 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008554.1 MGP_BALBcJ_G0006914.1 mouse_genomes_project 6 38022004 38029228 + 5830405F06Rik lincRNA lincRNA MGP_BALBcJ_T0008555.1 MGP_BALBcJ_G0006914.1 mouse_genomes_project 6 38022005 38027270 + 5830405F06Rik lincRNA lincRNA MGP_BALBcJ_T0101250.1 MGP_BALBcJ_G0039286.1 mouse_genomes_project 6 43552604 43552736 - Gm25161 snoRNA snoRNA MGP_BALBcJ_T0015227.1 MGP_BALBcJ_G0013324.1 mouse_genomes_project 6 9536574 9537470 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077966.1 MGP_BALBcJ_G0030831.1 mouse_genomes_project 6 68650966 68656805 - MGP_BALBcJ_P0077966 Tex37 protein_coding protein_coding MGP_BALBcJ_T0078881.1 MGP_BALBcJ_G0031018.1 mouse_genomes_project 6 88440780 88453443 + MGP_BALBcJ_P0078881 Klf15 protein_coding protein_coding MGP_BALBcJ_T0078882.1 MGP_BALBcJ_G0031018.1 mouse_genomes_project 6 88440878 88453443 + MGP_BALBcJ_P0078882 Klf15 protein_coding protein_coding MGP_BALBcJ_T0078883.1 MGP_BALBcJ_G0031018.1 mouse_genomes_project 6 88443508 88453440 + MGP_BALBcJ_P0078883 Klf15 protein_coding protein_coding MGP_BALBcJ_T0078884.1 MGP_BALBcJ_G0031018.1 mouse_genomes_project 6 88444604 88453440 + MGP_BALBcJ_P0078884 Klf15 protein_coding protein_coding MGP_BALBcJ_T0078885.1 MGP_BALBcJ_G0031018.1 mouse_genomes_project 6 88445322 88453426 + MGP_BALBcJ_P0078885 Klf15 protein_coding protein_coding MGP_BALBcJ_T0102610.1 MGP_BALBcJ_G0040426.1 mouse_genomes_project 6 40196876 40197183 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015251.1 MGP_BALBcJ_G0013348.1 mouse_genomes_project 6 19406549 19407325 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077111.1 MGP_BALBcJ_G0030586.1 mouse_genomes_project 6 36765308 36774460 - MGP_BALBcJ_P0077111 Mrps33 protein_coding protein_coding MGP_BALBcJ_T0077112.1 MGP_BALBcJ_G0030586.1 mouse_genomes_project 6 36765696 36774357 - MGP_BALBcJ_P0077112 Mrps33 protein_coding protein_coding MGP_BALBcJ_T0077113.1 MGP_BALBcJ_G0030586.1 mouse_genomes_project 6 36765888 36769581 - MGP_BALBcJ_P0077113 Mrps33 protein_coding protein_coding MGP_BALBcJ_T0077114.1 MGP_BALBcJ_G0030586.1 mouse_genomes_project 6 36768780 36774365 - Mrps33 protein_coding retained_intron MGP_BALBcJ_T0004932.1 MGP_BALBcJ_G0004235.1 mouse_genomes_project 6 49367764 49368930 + Gm15050 antisense antisense MGP_BALBcJ_T0004902.1 MGP_BALBcJ_G0004211.1 mouse_genomes_project 6 29263264 29266845 + Plxna4os2 antisense antisense MGP_BALBcJ_T0076253.1 MGP_BALBcJ_G0030425.1 mouse_genomes_project 6 4272092 4280474 + MGP_BALBcJ_P0076253 Tac1 protein_coding protein_coding MGP_BALBcJ_T0076254.1 MGP_BALBcJ_G0030425.1 mouse_genomes_project 6 4272159 4280479 + MGP_BALBcJ_P0076254 Tac1 protein_coding protein_coding MGP_BALBcJ_T0076255.1 MGP_BALBcJ_G0030425.1 mouse_genomes_project 6 4272288 4280473 + MGP_BALBcJ_P0076255 Tac1 protein_coding protein_coding MGP_BALBcJ_T0076256.1 MGP_BALBcJ_G0030425.1 mouse_genomes_project 6 4279864 4283334 + Tac1 protein_coding processed_transcript MGP_BALBcJ_T0001971.1 MGP_BALBcJ_G0001884.1 mouse_genomes_project 6 43145397 43147924 + TEC TEC MGP_BALBcJ_T0002169.1 MGP_BALBcJ_G0002081.1 mouse_genomes_project 6 140243093 140246637 + TEC TEC MGP_BALBcJ_T0080903.1 MGP_BALBcJ_G0031453.1 mouse_genomes_project 6 141603828 141749259 - MGP_BALBcJ_P0080903 St8sia1 protein_coding protein_coding MGP_BALBcJ_T0080904.1 MGP_BALBcJ_G0031453.1 mouse_genomes_project 6 141610507 141748948 - MGP_BALBcJ_P0080904 St8sia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080905.1 MGP_BALBcJ_G0031453.1 mouse_genomes_project 6 141611136 141673610 - St8sia1 protein_coding processed_transcript MGP_BALBcJ_T0001945.1 MGP_BALBcJ_G0001858.1 mouse_genomes_project 6 30535818 30537946 - TEC TEC MGP_BALBcJ_T0102628.1 MGP_BALBcJ_G0040444.1 mouse_genomes_project 6 64216604 64217504 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081107.1 MGP_BALBcJ_G0031486.1 mouse_genomes_project 6 146983694 147197754 - MGP_BALBcJ_P0081107 Tmtc1 protein_coding protein_coding MGP_BALBcJ_T0081108.1 MGP_BALBcJ_G0031486.1 mouse_genomes_project 6 146983694 147197754 - MGP_BALBcJ_P0081108 Tmtc1 protein_coding protein_coding MGP_BALBcJ_T0081109.1 MGP_BALBcJ_G0031486.1 mouse_genomes_project 6 146998293 147195005 - MGP_BALBcJ_P0081109 Tmtc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081110.1 MGP_BALBcJ_G0031486.1 mouse_genomes_project 6 147164442 147195005 - MGP_BALBcJ_P0081110 Tmtc1 protein_coding protein_coding MGP_BALBcJ_T0080436.1 MGP_BALBcJ_G0031318.1 mouse_genomes_project 6 127285087 127294172 - MGP_BALBcJ_P0080436 Clec2e protein_coding protein_coding MGP_BALBcJ_T0015540.1 MGP_BALBcJ_G0013637.1 mouse_genomes_project 6 117912121 117912409 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015526.1 MGP_BALBcJ_G0013623.1 mouse_genomes_project 6 112689150 112689538 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100012.1 MGP_BALBcJ_G0038048.1 mouse_genomes_project 6 76710435 76710599 + Gm23727 snRNA snRNA MGP_BALBcJ_T0002030.1 MGP_BALBcJ_G0001943.1 mouse_genomes_project 6 78252300 78254786 + TEC TEC MGP_BALBcJ_T0000309.1 MGP_BALBcJ_G0000250.1 mouse_genomes_project 6 67575470 67576037 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015413.1 MGP_BALBcJ_G0013510.1 mouse_genomes_project 6 69818564 69819666 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101952.1 MGP_BALBcJ_G0039812.1 mouse_genomes_project 6 127313822 127331878 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101953.1 MGP_BALBcJ_G0039812.1 mouse_genomes_project 6 127313822 127330659 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0015631.1 MGP_BALBcJ_G0013728.1 mouse_genomes_project 6 135424016 135424295 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098384.1 MGP_BALBcJ_G0036438.1 mouse_genomes_project 6 66361495 66361777 - pseudogene pseudogene MGP_BALBcJ_T0077579.1 MGP_BALBcJ_G0030724.1 mouse_genomes_project 6 49384710 49387098 - MGP_BALBcJ_P0077579 Hoxa4 protein_coding protein_coding MGP_BALBcJ_T0001938.1 MGP_BALBcJ_G0001851.1 mouse_genomes_project 6 26728556 26732168 - TEC TEC MGP_BALBcJ_T0008513.1 MGP_BALBcJ_G0006890.1 mouse_genomes_project 6 27889990 27890294 - Gm13834 lincRNA lincRNA MGP_BALBcJ_T0101944.1 MGP_BALBcJ_G0039808.1 mouse_genomes_project 6 119958603 119969858 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101945.1 MGP_BALBcJ_G0039808.1 mouse_genomes_project 6 119958707 119970892 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0015362.1 MGP_BALBcJ_G0013459.1 mouse_genomes_project 6 62655921 62656715 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015335.1 MGP_BALBcJ_G0013432.1 mouse_genomes_project 6 55394583 55395755 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080901.1 MGP_BALBcJ_G0031452.1 mouse_genomes_project 6 141566468 141586507 - MGP_BALBcJ_P0080901 Sult6b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080902.1 MGP_BALBcJ_G0031452.1 mouse_genomes_project 6 141567045 141586471 - MGP_BALBcJ_P0080902 Sult6b2 protein_coding protein_coding MGP_BALBcJ_T0010752.1 MGP_BALBcJ_G0008877.1 mouse_genomes_project 6 49426563 49426648 - Mir196b miRNA miRNA MGP_BALBcJ_T0002019.1 MGP_BALBcJ_G0001932.1 mouse_genomes_project 6 75287268 75290319 - TEC TEC MGP_BALBcJ_T0005603.1 MGP_BALBcJ_G0004721.1 mouse_genomes_project 6 84769472 84770514 - 2610306M01Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0008733.1 MGP_BALBcJ_G0007054.1 mouse_genomes_project 6 134337888 134360591 + 4930425L21Rik lincRNA lincRNA MGP_BALBcJ_T0008734.1 MGP_BALBcJ_G0007054.1 mouse_genomes_project 6 134356052 134361729 + 4930425L21Rik lincRNA lincRNA MGP_BALBcJ_T0011608.1 MGP_BALBcJ_G0009733.1 mouse_genomes_project 6 14443448 14443634 + Gm28008 misc_RNA misc_RNA MGP_BALBcJ_T0008653.1 MGP_BALBcJ_G0006991.1 mouse_genomes_project 6 88464597 88501243 + lincRNA lincRNA MGP_BALBcJ_T0079171.1 MGP_BALBcJ_G0031074.1 mouse_genomes_project 6 104732361 104770945 - MGP_BALBcJ_P0079171 Il5ra protein_coding protein_coding MGP_BALBcJ_T0079172.1 MGP_BALBcJ_G0031074.1 mouse_genomes_project 6 104732609 104770856 - MGP_BALBcJ_P0079172 Il5ra protein_coding protein_coding MGP_BALBcJ_T0079173.1 MGP_BALBcJ_G0031074.1 mouse_genomes_project 6 104733977 104767011 - MGP_BALBcJ_P0079173 Il5ra protein_coding protein_coding MGP_BALBcJ_T0010789.1 MGP_BALBcJ_G0008914.1 mouse_genomes_project 6 119248948 119249027 - Gm24855 miRNA miRNA MGP_BALBcJ_T0099995.1 MGP_BALBcJ_G0038031.1 mouse_genomes_project 6 29936784 29936888 - Gm22321 snRNA snRNA MGP_BALBcJ_T0008500.1 MGP_BALBcJ_G0006881.1 mouse_genomes_project 6 18609927 18615108 - Gm3289 lincRNA lincRNA MGP_BALBcJ_T0015276.1 MGP_BALBcJ_G0013373.1 mouse_genomes_project 6 35180463 35180887 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078858.1 MGP_BALBcJ_G0031010.1 mouse_genomes_project 6 88080198 88086850 + MGP_BALBcJ_P0078858 Vmn1r50 protein_coding protein_coding MGP_BALBcJ_T0078859.1 MGP_BALBcJ_G0031010.1 mouse_genomes_project 6 88085917 88086850 + MGP_BALBcJ_P0078859 Vmn1r50 protein_coding protein_coding MGP_BALBcJ_T0011607.1 MGP_BALBcJ_G0009732.1 mouse_genomes_project 6 14437109 14437365 + Gm27542 misc_RNA misc_RNA MGP_BALBcJ_T0098992.1 MGP_BALBcJ_G0037035.1 mouse_genomes_project 6 37079638 37090271 + Gm26638 sense_intronic sense_intronic MGP_BALBcJ_T0008611.1 MGP_BALBcJ_G0006960.1 mouse_genomes_project 6 69758975 69784913 - 9130221F21Rik lincRNA lincRNA MGP_BALBcJ_T0077173.1 MGP_BALBcJ_G0030613.1 mouse_genomes_project 6 38580135 38595168 + MGP_BALBcJ_P0077173 Ephb6 protein_coding protein_coding MGP_BALBcJ_T0077174.1 MGP_BALBcJ_G0030613.1 mouse_genomes_project 6 38587956 38589270 + Ephb6 protein_coding processed_transcript MGP_BALBcJ_T0077175.1 MGP_BALBcJ_G0030613.1 mouse_genomes_project 6 38589350 38591416 + MGP_BALBcJ_P0077175 Ephb6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077176.1 MGP_BALBcJ_G0030613.1 mouse_genomes_project 6 38594601 38595166 + MGP_BALBcJ_P0077176 Ephb6 protein_coding protein_coding MGP_BALBcJ_T0015650.1 MGP_BALBcJ_G0013747.1 mouse_genomes_project 6 145793201 145793660 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101282.1 MGP_BALBcJ_G0039318.1 mouse_genomes_project 6 103279624 103279763 + Gm23339 snoRNA snoRNA MGP_BALBcJ_T0002090.1 MGP_BALBcJ_G0002003.1 mouse_genomes_project 6 95185302 95188829 + TEC TEC MGP_BALBcJ_T0008638.1 MGP_BALBcJ_G0006981.1 mouse_genomes_project 6 84651495 84655077 + Gm44036 lincRNA lincRNA MGP_BALBcJ_T0079808.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118583053 118641296 + Cecr2 protein_coding retained_intron MGP_BALBcJ_T0079809.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118583105 118689409 + MGP_BALBcJ_P0079809 Cecr2 protein_coding protein_coding MGP_BALBcJ_T0079810.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118583219 118641124 + Cecr2 protein_coding processed_transcript MGP_BALBcJ_T0079811.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118583266 118685135 + MGP_BALBcJ_P0079811 Cecr2 protein_coding protein_coding MGP_BALBcJ_T0079812.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118652722 118674911 + Cecr2 protein_coding processed_transcript MGP_BALBcJ_T0079813.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118652789 118673786 + MGP_BALBcJ_P0079813 Cecr2 protein_coding protein_coding MGP_BALBcJ_T0079814.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118653919 118658055 + Cecr2 protein_coding retained_intron MGP_BALBcJ_T0079815.1 MGP_BALBcJ_G0031187.1 mouse_genomes_project 6 118676370 118679932 + MGP_BALBcJ_P0079815 Cecr2 protein_coding protein_coding MGP_BALBcJ_T0015590.1 MGP_BALBcJ_G0013687.1 mouse_genomes_project 6 127085560 127086260 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078473.1 MGP_BALBcJ_G0030930.1 mouse_genomes_project 6 83188124 83230998 - MGP_BALBcJ_P0078473 protein_coding protein_coding MGP_BALBcJ_T0078474.1 MGP_BALBcJ_G0030930.1 mouse_genomes_project 6 83188129 83231068 - MGP_BALBcJ_P0078474 protein_coding protein_coding MGP_BALBcJ_T0078475.1 MGP_BALBcJ_G0030930.1 mouse_genomes_project 6 83190790 83194800 - protein_coding processed_transcript MGP_BALBcJ_T0008678.1 MGP_BALBcJ_G0007010.1 mouse_genomes_project 6 105198896 105301828 - Gm44398 lincRNA lincRNA MGP_BALBcJ_T0015486.1 MGP_BALBcJ_G0013583.1 mouse_genomes_project 6 98811480 98812063 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000287.1 MGP_BALBcJ_G0000228.1 mouse_genomes_project 6 66061728 66061986 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0078131.1 MGP_BALBcJ_G0030862.1 mouse_genomes_project 6 70353606 70363557 + MGP_BALBcJ_P0078131 Retsat protein_coding protein_coding MGP_BALBcJ_T0078132.1 MGP_BALBcJ_G0030862.1 mouse_genomes_project 6 70353759 70362513 + MGP_BALBcJ_P0078132 Retsat protein_coding protein_coding MGP_BALBcJ_T0078133.1 MGP_BALBcJ_G0030862.1 mouse_genomes_project 6 70353759 70362513 + MGP_BALBcJ_P0078133 Retsat protein_coding protein_coding MGP_BALBcJ_T0078134.1 MGP_BALBcJ_G0030862.1 mouse_genomes_project 6 70359504 70361521 + Retsat protein_coding processed_transcript MGP_BALBcJ_T0078135.1 MGP_BALBcJ_G0030862.1 mouse_genomes_project 6 70361103 70362574 + MGP_BALBcJ_P0078135 Retsat protein_coding protein_coding MGP_BALBcJ_T0078136.1 MGP_BALBcJ_G0030862.1 mouse_genomes_project 6 70361776 70362343 + MGP_BALBcJ_P0078136 Retsat protein_coding protein_coding MGP_BALBcJ_T0101238.1 MGP_BALBcJ_G0039274.1 mouse_genomes_project 6 10772553 10772669 + Gm23760 snoRNA snoRNA MGP_BALBcJ_T0101268.1 MGP_BALBcJ_G0039304.1 mouse_genomes_project 6 69632469 69632606 - Gm22486 snoRNA snoRNA MGP_BALBcJ_T0076626.1 MGP_BALBcJ_G0030502.1 mouse_genomes_project 6 26116163 26123755 + Fam71f1 protein_coding processed_transcript MGP_BALBcJ_T0076627.1 MGP_BALBcJ_G0030502.1 mouse_genomes_project 6 26116163 26133042 + MGP_BALBcJ_P0076627 Fam71f1 protein_coding protein_coding MGP_BALBcJ_T0076628.1 MGP_BALBcJ_G0030502.1 mouse_genomes_project 6 26116180 26132877 + MGP_BALBcJ_P0076628 Fam71f1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076629.1 MGP_BALBcJ_G0030502.1 mouse_genomes_project 6 26116180 26132877 + MGP_BALBcJ_P0076629 Fam71f1 protein_coding protein_coding MGP_BALBcJ_T0076630.1 MGP_BALBcJ_G0030502.1 mouse_genomes_project 6 26116222 26132877 + MGP_BALBcJ_P0076630 Fam71f1 protein_coding protein_coding MGP_BALBcJ_T0015568.1 MGP_BALBcJ_G0013665.1 mouse_genomes_project 6 123339716 123340014 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101750.1 MGP_BALBcJ_G0039711.1 mouse_genomes_project 6 120961278 120964374 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101751.1 MGP_BALBcJ_G0039711.1 mouse_genomes_project 6 120961693 120961963 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0102643.1 MGP_BALBcJ_G0040459.1 mouse_genomes_project 6 121961147 121967895 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100031.1 MGP_BALBcJ_G0038067.1 mouse_genomes_project 6 118440227 118440329 + Gm24391 snRNA snRNA MGP_BALBcJ_T0008537.1 MGP_BALBcJ_G0006907.1 mouse_genomes_project 6 31522435 31524972 - Gm13861 lincRNA lincRNA MGP_BALBcJ_T0076483.1 MGP_BALBcJ_G0030465.1 mouse_genomes_project 6 19050632 19055985 + MGP_BALBcJ_P0076483 Wnt16 protein_coding protein_coding MGP_BALBcJ_T0076484.1 MGP_BALBcJ_G0030465.1 mouse_genomes_project 6 19050635 19061497 + MGP_BALBcJ_P0076484 Wnt16 protein_coding protein_coding MGP_BALBcJ_T0076485.1 MGP_BALBcJ_G0030465.1 mouse_genomes_project 6 19050693 19056991 + MGP_BALBcJ_P0076485 Wnt16 protein_coding protein_coding MGP_BALBcJ_T0076486.1 MGP_BALBcJ_G0030465.1 mouse_genomes_project 6 19051266 19060802 + MGP_BALBcJ_P0076486 Wnt16 protein_coding protein_coding MGP_BALBcJ_T0079457.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112904947 112938477 - MGP_BALBcJ_P0079457 Tamm41 protein_coding protein_coding MGP_BALBcJ_T0079458.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112904954 112913084 - Tamm41 protein_coding retained_intron MGP_BALBcJ_T0079459.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112908739 112916922 - Tamm41 protein_coding retained_intron MGP_BALBcJ_T0079460.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112911391 112932870 - MGP_BALBcJ_P0079460 Tamm41 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079461.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112912763 112938456 - MGP_BALBcJ_P0079461 Tamm41 protein_coding protein_coding MGP_BALBcJ_T0079462.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112916749 112938426 - MGP_BALBcJ_P0079462 Tamm41 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079463.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112925326 112938477 - Tamm41 protein_coding retained_intron MGP_BALBcJ_T0079464.1 MGP_BALBcJ_G0031124.1 mouse_genomes_project 6 112931883 112932871 - Tamm41 protein_coding processed_transcript MGP_BALBcJ_T0077170.1 MGP_BALBcJ_G0030610.1 mouse_genomes_project 6 38404884 38433576 - MGP_BALBcJ_P0077170 protein_coding protein_coding MGP_BALBcJ_T0015223.1 MGP_BALBcJ_G0013320.1 mouse_genomes_project 6 7480871 7481772 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015646.1 MGP_BALBcJ_G0013743.1 mouse_genomes_project 6 145217199 145217481 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077979.1 MGP_BALBcJ_G0030836.1 mouse_genomes_project 6 69016025 69029648 + MGP_BALBcJ_P0077979 Krcc1 protein_coding protein_coding MGP_BALBcJ_T0077980.1 MGP_BALBcJ_G0030836.1 mouse_genomes_project 6 69016049 69028569 + MGP_BALBcJ_P0077980 Krcc1 protein_coding protein_coding MGP_BALBcJ_T0077981.1 MGP_BALBcJ_G0030836.1 mouse_genomes_project 6 69016367 69029648 + MGP_BALBcJ_P0077981 Krcc1 protein_coding protein_coding MGP_BALBcJ_T0077982.1 MGP_BALBcJ_G0030836.1 mouse_genomes_project 6 69026608 69029647 + MGP_BALBcJ_P0077982 Krcc1 protein_coding protein_coding MGP_BALBcJ_T0015635.1 MGP_BALBcJ_G0013732.1 mouse_genomes_project 6 138838548 138838962 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018195.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023727 28141547 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018196.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023727 28141390 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018197.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023727 28141516 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018198.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023733 28141535 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018199.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023781 28141528 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018200.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023781 28141520 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018201.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023798 28141453 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018202.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023798 28132261 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018203.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023811 28141540 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018204.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023817 28141516 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018205.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28023823 28141543 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018206.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28081833 28097182 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018207.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28088975 28141546 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0018208.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28096495 28097628 + 2210408F21Rik processed_transcript TEC MGP_BALBcJ_T0018209.1 MGP_BALBcJ_G0015564.1 mouse_genomes_project 6 28125922 28141528 + 2210408F21Rik processed_transcript lincRNA MGP_BALBcJ_T0015418.1 MGP_BALBcJ_G0013515.1 mouse_genomes_project 6 71622131 71622317 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076433.1 MGP_BALBcJ_G0030455.1 mouse_genomes_project 6 14739846 14781529 - MGP_BALBcJ_P0076433 Wnt2 protein_coding protein_coding MGP_BALBcJ_T0015410.1 MGP_BALBcJ_G0013507.1 mouse_genomes_project 6 69429469 69430185 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008479.1 MGP_BALBcJ_G0006866.1 mouse_genomes_project 6 3327444 3407292 - Gm20618 lincRNA lincRNA MGP_BALBcJ_T0008480.1 MGP_BALBcJ_G0006866.1 mouse_genomes_project 6 3354865 3417470 - Gm20618 lincRNA lincRNA MGP_BALBcJ_T0078358.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81300271 81327089 - MGP_BALBcJ_P0078358 Dguok protein_coding protein_coding MGP_BALBcJ_T0078359.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81300273 81327043 - MGP_BALBcJ_P0078359 Dguok protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078360.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81300363 81327021 - MGP_BALBcJ_P0078360 Dguok protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078361.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81300919 81313720 - Dguok protein_coding processed_transcript MGP_BALBcJ_T0078362.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81301267 81307059 - Dguok protein_coding processed_transcript MGP_BALBcJ_T0078363.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81308027 81310467 - Dguok protein_coding retained_intron MGP_BALBcJ_T0078364.1 MGP_BALBcJ_G0030911.1 mouse_genomes_project 6 81310254 81327107 - Dguok protein_coding retained_intron MGP_BALBcJ_T0002086.1 MGP_BALBcJ_G0001999.1 mouse_genomes_project 6 91228477 91231654 + TEC TEC MGP_BALBcJ_T0008682.1 MGP_BALBcJ_G0007014.1 mouse_genomes_project 6 110962325 110964619 + Gm44081 lincRNA lincRNA MGP_BALBcJ_T0076458.1 MGP_BALBcJ_G0030460.1 mouse_genomes_project 6 15608028 15621324 + MGP_BALBcJ_P0076458 Ankrd7 protein_coding protein_coding MGP_BALBcJ_T0076459.1 MGP_BALBcJ_G0030460.1 mouse_genomes_project 6 15608060 15621320 + MGP_BALBcJ_P0076459 Ankrd7 protein_coding protein_coding MGP_BALBcJ_T0102611.1 MGP_BALBcJ_G0040427.1 mouse_genomes_project 6 40248025 40249653 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0078476.1 MGP_BALBcJ_G0030931.1 mouse_genomes_project 6 83284515 83289493 + MGP_BALBcJ_P0078476 Noto protein_coding protein_coding MGP_BALBcJ_T0078477.1 MGP_BALBcJ_G0030931.1 mouse_genomes_project 6 83284697 83288852 + MGP_BALBcJ_P0078477 Noto protein_coding protein_coding MGP_BALBcJ_T0001937.1 MGP_BALBcJ_G0001850.1 mouse_genomes_project 6 26345762 26347277 - TEC TEC MGP_BALBcJ_T0102629.1 MGP_BALBcJ_G0040445.1 mouse_genomes_project 6 68217255 68217403 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0077917.1 MGP_BALBcJ_G0030818.1 mouse_genomes_project 6 64092808 64093938 - MGP_BALBcJ_P0077917 protein_coding protein_coding MGP_BALBcJ_T0015562.1 MGP_BALBcJ_G0013659.1 mouse_genomes_project 6 121913811 121914658 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077465.1 MGP_BALBcJ_G0030696.1 mouse_genomes_project 6 45999353 46032976 + MGP_BALBcJ_P0077465 Aoc1 protein_coding protein_coding MGP_BALBcJ_T0077466.1 MGP_BALBcJ_G0030696.1 mouse_genomes_project 6 46022353 46036288 + MGP_BALBcJ_P0077466 Aoc1 protein_coding protein_coding MGP_BALBcJ_T0077467.1 MGP_BALBcJ_G0030696.1 mouse_genomes_project 6 46032085 46036287 + MGP_BALBcJ_P0077467 Aoc1 protein_coding protein_coding MGP_BALBcJ_T0077468.1 MGP_BALBcJ_G0030696.1 mouse_genomes_project 6 46032085 46036287 + MGP_BALBcJ_P0077468 Aoc1 protein_coding protein_coding MGP_BALBcJ_T0077469.1 MGP_BALBcJ_G0030696.1 mouse_genomes_project 6 46034454 46035751 + Aoc1 protein_coding retained_intron MGP_BALBcJ_T0005053.1 MGP_BALBcJ_G0004314.1 mouse_genomes_project 6 120872742 120879948 - Gm26826 antisense antisense MGP_BALBcJ_T0005008.1 MGP_BALBcJ_G0004282.1 mouse_genomes_project 6 86775657 86780081 + Gm15612 antisense antisense MGP_BALBcJ_T0076348.1 MGP_BALBcJ_G0030445.1 mouse_genomes_project 6 11412609 11455784 - MGP_BALBcJ_P0076348 Ppp1r3a protein_coding protein_coding MGP_BALBcJ_T0018282.1 MGP_BALBcJ_G0015590.1 mouse_genomes_project 6 141596514 141615770 + Gm7457 processed_transcript antisense MGP_BALBcJ_T0018283.1 MGP_BALBcJ_G0015590.1 mouse_genomes_project 6 141596668 141599239 + Gm7457 processed_transcript retained_intron MGP_BALBcJ_T0080513.1 MGP_BALBcJ_G0031347.1 mouse_genomes_project 6 128604524 128616662 - MGP_BALBcJ_P0080513 protein_coding protein_coding MGP_BALBcJ_T0076786.1 MGP_BALBcJ_G0030525.1 mouse_genomes_project 6 27459081 27465227 + MGP_BALBcJ_P0076786 Cpa1 protein_coding protein_coding MGP_BALBcJ_T0076787.1 MGP_BALBcJ_G0030525.1 mouse_genomes_project 6 27460204 27461738 + Cpa1 protein_coding retained_intron MGP_BALBcJ_T0076467.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18708590 18735252 + MGP_BALBcJ_P0076467 Ing3 protein_coding protein_coding MGP_BALBcJ_T0076468.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18708668 18733744 + Ing3 protein_coding retained_intron MGP_BALBcJ_T0076469.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18708673 18733345 + MGP_BALBcJ_P0076469 Ing3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076470.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18708676 18734117 + MGP_BALBcJ_P0076470 Ing3 protein_coding protein_coding MGP_BALBcJ_T0076471.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18708689 18729278 + MGP_BALBcJ_P0076471 Ing3 protein_coding protein_coding MGP_BALBcJ_T0076472.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18708704 18732940 + MGP_BALBcJ_P0076472 Ing3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076473.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18709039 18726928 + MGP_BALBcJ_P0076473 Ing3 protein_coding protein_coding MGP_BALBcJ_T0076474.1 MGP_BALBcJ_G0030463.1 mouse_genomes_project 6 18711076 18713276 + Ing3 protein_coding retained_intron MGP_BALBcJ_T0080006.1 MGP_BALBcJ_G0031234.1 mouse_genomes_project 6 122562324 122582802 - MGP_BALBcJ_P0080006 C1s1 protein_coding protein_coding MGP_BALBcJ_T0080007.1 MGP_BALBcJ_G0031234.1 mouse_genomes_project 6 122562327 122582803 - MGP_BALBcJ_P0080007 C1s1 protein_coding protein_coding MGP_BALBcJ_T0080008.1 MGP_BALBcJ_G0031234.1 mouse_genomes_project 6 122565870 122579635 - C1s1 protein_coding retained_intron MGP_BALBcJ_T0080009.1 MGP_BALBcJ_G0031234.1 mouse_genomes_project 6 122579578 122582784 - MGP_BALBcJ_P0080009 C1s1 protein_coding protein_coding MGP_BALBcJ_T0080010.1 MGP_BALBcJ_G0031234.1 mouse_genomes_project 6 122580195 122582790 - MGP_BALBcJ_P0080010 C1s1 protein_coding protein_coding MGP_BALBcJ_T0005060.1 MGP_BALBcJ_G0004321.1 mouse_genomes_project 6 123557382 123560741 + Gm28809 antisense antisense MGP_BALBcJ_T0005061.1 MGP_BALBcJ_G0004321.1 mouse_genomes_project 6 123557963 123559630 + Gm28809 antisense antisense MGP_BALBcJ_T0002085.1 MGP_BALBcJ_G0001998.1 mouse_genomes_project 6 91109948 91111411 + TEC TEC MGP_BALBcJ_T0077786.1 MGP_BALBcJ_G0030783.1 mouse_genomes_project 6 54801266 54829479 - MGP_BALBcJ_P0077786 Ppm1k protein_coding protein_coding MGP_BALBcJ_T0077787.1 MGP_BALBcJ_G0030783.1 mouse_genomes_project 6 54808350 54810361 - MGP_BALBcJ_P0077787 Ppm1k protein_coding protein_coding MGP_BALBcJ_T0077788.1 MGP_BALBcJ_G0030783.1 mouse_genomes_project 6 54828487 54829521 - Ppm1k protein_coding processed_transcript MGP_BALBcJ_T0004997.1 MGP_BALBcJ_G0004275.1 mouse_genomes_project 6 85649092 85650277 - Gm44210 antisense antisense MGP_BALBcJ_T0080563.1 MGP_BALBcJ_G0031380.1 mouse_genomes_project 6 131398963 131399964 - MGP_BALBcJ_P0080563 Tas2r140 protein_coding protein_coding MGP_BALBcJ_T0015373.1 MGP_BALBcJ_G0013470.1 mouse_genomes_project 6 63464183 63464877 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002083.1 MGP_BALBcJ_G0001996.1 mouse_genomes_project 6 90033390 90035320 + TEC TEC MGP_BALBcJ_T0078886.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88464631 88545276 + Aldh1l1 protein_coding processed_transcript MGP_BALBcJ_T0078887.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88536668 88585974 + MGP_BALBcJ_P0078887 Aldh1l1 protein_coding protein_coding MGP_BALBcJ_T0078888.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88536684 88584940 + MGP_BALBcJ_P0078888 Aldh1l1 protein_coding protein_coding MGP_BALBcJ_T0078889.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88536722 88545851 + MGP_BALBcJ_P0078889 Aldh1l1 protein_coding protein_coding MGP_BALBcJ_T0078890.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88536727 88584931 + MGP_BALBcJ_P0078890 Aldh1l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078891.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88553580 88556759 + Aldh1l1 protein_coding processed_transcript MGP_BALBcJ_T0078892.1 MGP_BALBcJ_G0031019.1 mouse_genomes_project 6 88575121 88582846 + Aldh1l1 protein_coding retained_intron MGP_BALBcJ_T0008579.1 MGP_BALBcJ_G0006934.1 mouse_genomes_project 6 49203752 49218101 + Gm44077 lincRNA lincRNA MGP_BALBcJ_T0080970.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006237 144010902 + MGP_BALBcJ_P0080970 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080971.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006259 144012052 + MGP_BALBcJ_P0080971 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080972.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006259 144011649 + MGP_BALBcJ_P0080972 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080973.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006273 144010078 + Lyrm5 protein_coding processed_transcript MGP_BALBcJ_T0080974.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006278 144011649 + MGP_BALBcJ_P0080974 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080975.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006278 144010882 + MGP_BALBcJ_P0080975 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080976.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006289 144011649 + MGP_BALBcJ_P0080976 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080977.1 MGP_BALBcJ_G0031460.1 mouse_genomes_project 6 144006303 144010845 + MGP_BALBcJ_P0080977 Lyrm5 protein_coding protein_coding MGP_BALBcJ_T0080005.1 MGP_BALBcJ_G0031233.1 mouse_genomes_project 6 122521657 122613222 + MGP_BALBcJ_P0080005 C1rl protein_coding protein_coding MGP_BALBcJ_T0080507.1 MGP_BALBcJ_G0031343.1 mouse_genomes_project 6 128457097 128473315 - MGP_BALBcJ_P0080507 protein_coding protein_coding MGP_BALBcJ_T0077298.1 MGP_BALBcJ_G0030661.1 mouse_genomes_project 6 40414838 40740745 - MGP_BALBcJ_P0077298 Tpk1 protein_coding protein_coding MGP_BALBcJ_T0077299.1 MGP_BALBcJ_G0030661.1 mouse_genomes_project 6 40414910 40700758 - Tpk1 protein_coding processed_transcript MGP_BALBcJ_T0077300.1 MGP_BALBcJ_G0030661.1 mouse_genomes_project 6 40415111 40740642 - MGP_BALBcJ_P0077300 Tpk1 protein_coding protein_coding MGP_BALBcJ_T0077301.1 MGP_BALBcJ_G0030661.1 mouse_genomes_project 6 40416679 40550486 - Tpk1 protein_coding processed_transcript MGP_BALBcJ_T0077302.1 MGP_BALBcJ_G0030661.1 mouse_genomes_project 6 40664850 40740686 - Tpk1 protein_coding processed_transcript MGP_BALBcJ_T0077303.1 MGP_BALBcJ_G0030661.1 mouse_genomes_project 6 40666302 40740348 - Tpk1 protein_coding processed_transcript MGP_BALBcJ_T0015255.1 MGP_BALBcJ_G0013352.1 mouse_genomes_project 6 20880582 20888799 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008588.1 MGP_BALBcJ_G0006940.1 mouse_genomes_project 6 51025276 51027453 + Gm16499 lincRNA lincRNA MGP_BALBcJ_T0008589.1 MGP_BALBcJ_G0006940.1 mouse_genomes_project 6 51025277 51025343 + Gm16499 lincRNA lincRNA MGP_BALBcJ_T0010745.1 MGP_BALBcJ_G0008870.1 mouse_genomes_project 6 35417971 35418040 + Mir7670 miRNA miRNA MGP_BALBcJ_T0077169.1 MGP_BALBcJ_G0030609.1 mouse_genomes_project 6 38328311 38332025 + MGP_BALBcJ_P0077169 Try10 protein_coding protein_coding MGP_BALBcJ_T0005081.1 MGP_BALBcJ_G0004338.1 mouse_genomes_project 6 133548017 133551116 + 2810454H06Rik antisense antisense MGP_BALBcJ_T0015604.1 MGP_BALBcJ_G0013701.1 mouse_genomes_project 6 129619987 129620102 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015293.1 MGP_BALBcJ_G0013390.1 mouse_genomes_project 6 40834056 40834802 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002068.1 MGP_BALBcJ_G0001981.1 mouse_genomes_project 6 86734783 86738548 + TEC TEC MGP_BALBcJ_T0080884.1 MGP_BALBcJ_G0031448.1 mouse_genomes_project 6 141268774 141287400 - MGP_BALBcJ_P0080884 Ldhb protein_coding protein_coding MGP_BALBcJ_T0080885.1 MGP_BALBcJ_G0031448.1 mouse_genomes_project 6 141268865 141280785 - MGP_BALBcJ_P0080885 Ldhb protein_coding protein_coding MGP_BALBcJ_T0080886.1 MGP_BALBcJ_G0031448.1 mouse_genomes_project 6 141274097 141287203 - MGP_BALBcJ_P0080886 Ldhb protein_coding protein_coding MGP_BALBcJ_T0005038.1 MGP_BALBcJ_G0004299.1 mouse_genomes_project 6 111297475 111298569 - Gm16161 antisense antisense MGP_BALBcJ_T0079508.1 MGP_BALBcJ_G0031135.1 mouse_genomes_project 6 113712733 113715976 - MGP_BALBcJ_P0079508 Rpl32 protein_coding protein_coding MGP_BALBcJ_T0079509.1 MGP_BALBcJ_G0031135.1 mouse_genomes_project 6 113712740 113715577 - MGP_BALBcJ_P0079509 Rpl32 protein_coding protein_coding MGP_BALBcJ_T0001921.1 MGP_BALBcJ_G0001834.1 mouse_genomes_project 6 14459721 14462639 + TEC TEC MGP_BALBcJ_T0002106.1 MGP_BALBcJ_G0002019.1 mouse_genomes_project 6 101587680 101591272 + TEC TEC MGP_BALBcJ_T0076503.1 MGP_BALBcJ_G0030470.1 mouse_genomes_project 6 20022647 20025946 - MGP_BALBcJ_P0076503 Fezf1 protein_coding protein_coding MGP_BALBcJ_T0015396.1 MGP_BALBcJ_G0013493.1 mouse_genomes_project 6 65694184 65694945 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008482.1 MGP_BALBcJ_G0006868.1 mouse_genomes_project 6 4036687 4041533 + Gm19272 lincRNA lincRNA MGP_BALBcJ_T0008483.1 MGP_BALBcJ_G0006868.1 mouse_genomes_project 6 4036687 4044559 + Gm19272 lincRNA lincRNA MGP_BALBcJ_T0100008.1 MGP_BALBcJ_G0038044.1 mouse_genomes_project 6 63459694 63459794 - Gm23625 snRNA snRNA MGP_BALBcJ_T0000313.1 MGP_BALBcJ_G0000254.1 mouse_genomes_project 6 68025801 68026367 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015614.1 MGP_BALBcJ_G0013711.1 mouse_genomes_project 6 130822162 130822634 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015309.1 MGP_BALBcJ_G0013406.1 mouse_genomes_project 6 46090690 46091174 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005054.1 MGP_BALBcJ_G0004315.1 mouse_genomes_project 6 122520707 122523020 - Gm44096 antisense antisense MGP_BALBcJ_T0005010.1 MGP_BALBcJ_G0004284.1 mouse_genomes_project 6 88582468 88585719 - Gm15756 antisense antisense MGP_BALBcJ_T0015422.1 MGP_BALBcJ_G0013519.1 mouse_genomes_project 6 73579841 73580240 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008727.1 MGP_BALBcJ_G0007052.1 mouse_genomes_project 6 133579145 133605952 + Lockd lincRNA lincRNA MGP_BALBcJ_T0008728.1 MGP_BALBcJ_G0007052.1 mouse_genomes_project 6 133579151 133600973 + Lockd lincRNA lincRNA MGP_BALBcJ_T0008729.1 MGP_BALBcJ_G0007052.1 mouse_genomes_project 6 133579151 133600739 + Lockd lincRNA lincRNA MGP_BALBcJ_T0008730.1 MGP_BALBcJ_G0007052.1 mouse_genomes_project 6 133579186 133600971 + Lockd lincRNA lincRNA MGP_BALBcJ_T0008731.1 MGP_BALBcJ_G0007052.1 mouse_genomes_project 6 133579208 133601114 + Lockd lincRNA lincRNA MGP_BALBcJ_T0079433.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543250 112760552 + MGP_BALBcJ_P0079433 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079434.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543265 112760550 + MGP_BALBcJ_P0079434 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079435.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543269 112586525 + Atg7 protein_coding retained_intron MGP_BALBcJ_T0079436.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543271 112579530 + MGP_BALBcJ_P0079436 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079437.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543275 112759076 + MGP_BALBcJ_P0079437 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079438.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543280 112759167 + MGP_BALBcJ_P0079438 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079439.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543280 112574906 + MGP_BALBcJ_P0079439 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079440.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543282 112759176 + MGP_BALBcJ_P0079440 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079441.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543282 112759170 + MGP_BALBcJ_P0079441 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079442.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112543284 112587831 + MGP_BALBcJ_P0079442 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079443.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112550636 112586129 + MGP_BALBcJ_P0079443 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079444.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112554226 112587814 + MGP_BALBcJ_P0079444 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079445.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112559854 112575493 + MGP_BALBcJ_P0079445 Atg7 protein_coding protein_coding MGP_BALBcJ_T0079446.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112581773 112603824 + Atg7 protein_coding processed_transcript MGP_BALBcJ_T0079447.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112584895 112587103 + Atg7 protein_coding retained_intron MGP_BALBcJ_T0079448.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112624944 112759170 + Atg7 protein_coding processed_transcript MGP_BALBcJ_T0079449.1 MGP_BALBcJ_G0031122.1 mouse_genomes_project 6 112756096 112759168 + Atg7 protein_coding processed_transcript MGP_BALBcJ_T0102604.1 MGP_BALBcJ_G0040420.1 mouse_genomes_project 6 39429869 39430011 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0079341.1 MGP_BALBcJ_G0031103.1 mouse_genomes_project 6 111448536 111457639 - MGP_BALBcJ_P0079341 Cidec protein_coding protein_coding MGP_BALBcJ_T0079342.1 MGP_BALBcJ_G0031103.1 mouse_genomes_project 6 111451422 111457518 - MGP_BALBcJ_P0079342 Cidec protein_coding protein_coding MGP_BALBcJ_T0004927.1 MGP_BALBcJ_G0004233.1 mouse_genomes_project 6 47713665 47741897 + 5430402O13Rik antisense antisense MGP_BALBcJ_T0004928.1 MGP_BALBcJ_G0004233.1 mouse_genomes_project 6 47713760 47741854 + 5430402O13Rik antisense antisense MGP_BALBcJ_T0005022.1 MGP_BALBcJ_G0004291.1 mouse_genomes_project 6 97781954 97788659 + Gm26748 antisense antisense MGP_BALBcJ_T0008481.1 MGP_BALBcJ_G0006867.1 mouse_genomes_project 6 3679804 3684467 - Gm26774 lincRNA lincRNA MGP_BALBcJ_T0000298.1 MGP_BALBcJ_G0000239.1 mouse_genomes_project 6 66621013 66621479 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0099001.1 MGP_BALBcJ_G0037044.1 mouse_genomes_project 6 123269920 123270201 - Gm28967 sense_intronic sense_intronic MGP_BALBcJ_T0080655.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134390828 134870407 - MGP_BALBcJ_P0080655 Grin2b protein_coding protein_coding MGP_BALBcJ_T0080656.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134407188 134870793 - MGP_BALBcJ_P0080656 Grin2b protein_coding protein_coding MGP_BALBcJ_T0080657.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134548414 134870793 - MGP_BALBcJ_P0080657 Grin2b protein_coding protein_coding MGP_BALBcJ_T0080658.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134733647 134869170 - MGP_BALBcJ_P0080658 Grin2b protein_coding protein_coding MGP_BALBcJ_T0080659.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134733650 134870793 - MGP_BALBcJ_P0080659 Grin2b protein_coding protein_coding MGP_BALBcJ_T0080660.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134733650 134870793 - MGP_BALBcJ_P0080660 Grin2b protein_coding protein_coding MGP_BALBcJ_T0080661.1 MGP_BALBcJ_G0031402.1 mouse_genomes_project 6 134869043 134870666 - Grin2b protein_coding processed_transcript MGP_BALBcJ_T0000314.1 MGP_BALBcJ_G0000255.1 mouse_genomes_project 6 68149024 68149296 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0002067.1 MGP_BALBcJ_G0001980.1 mouse_genomes_project 6 86716565 86719687 - TEC TEC MGP_BALBcJ_T0001977.1 MGP_BALBcJ_G0001890.1 mouse_genomes_project 6 44735953 44737538 + TEC TEC MGP_BALBcJ_T0078566.1 MGP_BALBcJ_G0030953.1 mouse_genomes_project 6 84295779 84307343 - MGP_BALBcJ_P0078566 Pcyox1 protein_coding protein_coding MGP_BALBcJ_T0078567.1 MGP_BALBcJ_G0030953.1 mouse_genomes_project 6 84298444 84307330 - MGP_BALBcJ_P0078567 Pcyox1 protein_coding protein_coding MGP_BALBcJ_T0078568.1 MGP_BALBcJ_G0030953.1 mouse_genomes_project 6 84298762 84302117 - MGP_BALBcJ_P0078568 Pcyox1 protein_coding protein_coding MGP_BALBcJ_T0078569.1 MGP_BALBcJ_G0030953.1 mouse_genomes_project 6 84301457 84307332 - MGP_BALBcJ_P0078569 Pcyox1 protein_coding protein_coding MGP_BALBcJ_T0078570.1 MGP_BALBcJ_G0030953.1 mouse_genomes_project 6 84304250 84306815 - Pcyox1 protein_coding retained_intron MGP_BALBcJ_T0078571.1 MGP_BALBcJ_G0030953.1 mouse_genomes_project 6 84305971 84307308 - Pcyox1 protein_coding retained_intron MGP_BALBcJ_T0101281.1 MGP_BALBcJ_G0039317.1 mouse_genomes_project 6 98570298 98570432 - Gm23234 snoRNA snoRNA MGP_BALBcJ_T0018220.1 MGP_BALBcJ_G0015569.1 mouse_genomes_project 6 49440856 49446254 + Hoxa11os processed_transcript antisense MGP_BALBcJ_T0018221.1 MGP_BALBcJ_G0015569.1 mouse_genomes_project 6 49441706 49446232 + Hoxa11os processed_transcript antisense MGP_BALBcJ_T0018222.1 MGP_BALBcJ_G0015569.1 mouse_genomes_project 6 49442431 49446258 + Hoxa11os processed_transcript antisense MGP_BALBcJ_T0018223.1 MGP_BALBcJ_G0015569.1 mouse_genomes_project 6 49442451 49446253 + Hoxa11os processed_transcript antisense MGP_BALBcJ_T0018224.1 MGP_BALBcJ_G0015569.1 mouse_genomes_project 6 49442683 49445843 + Hoxa11os processed_transcript retained_intron MGP_BALBcJ_T0018225.1 MGP_BALBcJ_G0015569.1 mouse_genomes_project 6 49444884 49446262 + Hoxa11os processed_transcript antisense MGP_BALBcJ_T0008703.1 MGP_BALBcJ_G0007033.1 mouse_genomes_project 6 122388231 122389505 - 1700027F06Rik lincRNA lincRNA MGP_BALBcJ_T0002140.1 MGP_BALBcJ_G0002052.1 mouse_genomes_project 6 125859236 125861514 - TEC TEC MGP_BALBcJ_T0098995.1 MGP_BALBcJ_G0037038.1 mouse_genomes_project 6 84899626 84900470 + Gm44091 sense_intronic sense_intronic MGP_BALBcJ_T0076271.1 MGP_BALBcJ_G0030430.1 mouse_genomes_project 6 4973518 4977457 - MGP_BALBcJ_P0076271 Rpa3 protein_coding protein_coding MGP_BALBcJ_T0076272.1 MGP_BALBcJ_G0030430.1 mouse_genomes_project 6 4974803 4977424 - Rpa3 protein_coding retained_intron MGP_BALBcJ_T0002008.1 MGP_BALBcJ_G0001921.1 mouse_genomes_project 6 70390984 70394393 - TEC TEC MGP_BALBcJ_T0015405.1 MGP_BALBcJ_G0013502.1 mouse_genomes_project 6 67851032 67852019 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101748.1 MGP_BALBcJ_G0039710.1 mouse_genomes_project 6 98320193 98321225 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101749.1 MGP_BALBcJ_G0039710.1 mouse_genomes_project 6 98321096 98323310 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0015555.1 MGP_BALBcJ_G0013652.1 mouse_genomes_project 6 120590744 120590935 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076946.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31896123 31898912 - Cnot4 protein_coding retained_intron MGP_BALBcJ_T0076947.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31896123 32009133 - MGP_BALBcJ_P0076947 Cnot4 protein_coding protein_coding MGP_BALBcJ_T0076948.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31896124 32009202 - MGP_BALBcJ_P0076948 Cnot4 protein_coding protein_coding MGP_BALBcJ_T0076949.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31896129 32009197 - MGP_BALBcJ_P0076949 Cnot4 protein_coding protein_coding MGP_BALBcJ_T0076950.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31919325 32009223 - MGP_BALBcJ_P0076950 Cnot4 protein_coding protein_coding MGP_BALBcJ_T0076951.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31920628 31960704 - MGP_BALBcJ_P0076951 Cnot4 protein_coding unknown_likely_coding MGP_BALBcJ_T0076952.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31927347 31931288 - Cnot4 protein_coding retained_intron MGP_BALBcJ_T0076953.1 MGP_BALBcJ_G0030551.1 mouse_genomes_project 6 31927778 32009195 - Cnot4 protein_coding processed_transcript MGP_BALBcJ_T0015546.1 MGP_BALBcJ_G0013643.1 mouse_genomes_project 6 119467610 119467883 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011655.1 MGP_BALBcJ_G0009780.1 mouse_genomes_project 6 141024380 141024669 - Gm25430 misc_RNA misc_RNA MGP_BALBcJ_T0077287.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40340605 40364338 + MGP_BALBcJ_P0077287 Arhgef5 protein_coding protein_coding MGP_BALBcJ_T0077288.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40349528 40364337 + MGP_BALBcJ_P0077288 Arhgef5 protein_coding protein_coding MGP_BALBcJ_T0077289.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40351955 40354938 + Arhgef5 protein_coding retained_intron MGP_BALBcJ_T0077290.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40352064 40362213 + Arhgef5 protein_coding retained_intron MGP_BALBcJ_T0077291.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40354474 40364334 + Arhgef5 protein_coding retained_intron MGP_BALBcJ_T0077292.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40356007 40358584 + Arhgef5 protein_coding retained_intron MGP_BALBcJ_T0077293.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40357631 40364333 + Arhgef5 protein_coding retained_intron MGP_BALBcJ_T0077294.1 MGP_BALBcJ_G0030659.1 mouse_genomes_project 6 40357899 40359033 + Arhgef5 protein_coding retained_intron MGP_BALBcJ_T0099994.1 MGP_BALBcJ_G0038030.1 mouse_genomes_project 6 26780164 26780271 + Gm24536 snRNA snRNA MGP_BALBcJ_T0002051.1 MGP_BALBcJ_G0001964.1 mouse_genomes_project 6 85101710 85103771 - TEC TEC MGP_BALBcJ_T0002005.1 MGP_BALBcJ_G0001918.1 mouse_genomes_project 6 69851209 69853822 + TEC TEC MGP_BALBcJ_T0008665.1 MGP_BALBcJ_G0007000.1 mouse_genomes_project 6 97989876 98012384 - Gm44442 lincRNA lincRNA MGP_BALBcJ_T0008666.1 MGP_BALBcJ_G0007000.1 mouse_genomes_project 6 97989877 97993457 - Gm44442 lincRNA lincRNA MGP_BALBcJ_T0002662.1 MGP_BALBcJ_G0002547.1 mouse_genomes_project 6 38153770 38154444 + MGP_BALBcJ_P0002662 Trbv19 TR_V_gene TR_V_gene MGP_BALBcJ_T0079465.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113036285 113175052 + Syn2 protein_coding retained_intron MGP_BALBcJ_T0079466.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113036285 113176520 + MGP_BALBcJ_P0079466 Syn2 protein_coding protein_coding MGP_BALBcJ_T0079467.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113036300 113181967 + MGP_BALBcJ_P0079467 Syn2 protein_coding protein_coding MGP_BALBcJ_T0079468.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113036333 113176520 + MGP_BALBcJ_P0079468 Syn2 protein_coding protein_coding MGP_BALBcJ_T0079469.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113113236 113144204 + Syn2 protein_coding processed_transcript MGP_BALBcJ_T0079471.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113139081 113176520 + Syn2 protein_coding processed_transcript MGP_BALBcJ_T0079474.1 MGP_BALBcJ_G0031125.1 mouse_genomes_project 6 113152955 113178670 + Syn2 protein_coding retained_intron MGP_BALBcJ_T0015325.1 MGP_BALBcJ_G0013422.1 mouse_genomes_project 6 49311782 49312436 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101283.1 MGP_BALBcJ_G0039319.1 mouse_genomes_project 6 113628695 113628833 - Gm24008 snoRNA snoRNA MGP_BALBcJ_T0079599.1 MGP_BALBcJ_G0031151.1 mouse_genomes_project 6 114468251 114471348 + MGP_BALBcJ_P0079599 Olfr214 protein_coding protein_coding MGP_BALBcJ_T0079600.1 MGP_BALBcJ_G0031151.1 mouse_genomes_project 6 114470340 114471348 + MGP_BALBcJ_P0079600 Olfr214 protein_coding protein_coding MGP_BALBcJ_T0078409.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81702534 81763701 + MGP_BALBcJ_P0078409 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078410.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81702535 81778273 + MGP_BALBcJ_P0078410 Zfp638 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078411.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748795 81824645 + MGP_BALBcJ_P0078411 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078412.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748799 81766422 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078413.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748799 81778249 + Zfp638 protein_coding processed_transcript MGP_BALBcJ_T0078414.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748801 81791935 + MGP_BALBcJ_P0078414 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078415.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748802 81800683 + MGP_BALBcJ_P0078415 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078416.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748818 81822019 + MGP_BALBcJ_P0078416 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078417.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748818 81822021 + MGP_BALBcJ_P0078417 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078418.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748820 81821799 + MGP_BALBcJ_P0078418 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078419.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748823 81750325 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078420.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81748825 81778285 + Zfp638 protein_coding processed_transcript MGP_BALBcJ_T0078421.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81763433 81821773 + MGP_BALBcJ_P0078421 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078422.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81763433 81822021 + MGP_BALBcJ_P0078422 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078423.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81777891 81779971 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078424.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81783149 81804380 + MGP_BALBcJ_P0078424 Zfp638 protein_coding protein_coding MGP_BALBcJ_T0078425.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81797194 81801995 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078426.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81800738 81802967 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078427.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81814754 81816987 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078428.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81818751 81822019 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078429.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81818751 81821723 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0078430.1 MGP_BALBcJ_G0030922.1 mouse_genomes_project 6 81819503 81821767 + Zfp638 protein_coding retained_intron MGP_BALBcJ_T0015412.1 MGP_BALBcJ_G0013509.1 mouse_genomes_project 6 69668785 69669731 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078125.1 MGP_BALBcJ_G0030861.1 mouse_genomes_project 6 70320212 70353474 - MGP_BALBcJ_P0078125 Elmod3 protein_coding protein_coding MGP_BALBcJ_T0078126.1 MGP_BALBcJ_G0030861.1 mouse_genomes_project 6 70320224 70353475 - MGP_BALBcJ_P0078126 Elmod3 protein_coding protein_coding MGP_BALBcJ_T0078127.1 MGP_BALBcJ_G0030861.1 mouse_genomes_project 6 70322627 70353527 - MGP_BALBcJ_P0078127 Elmod3 protein_coding protein_coding MGP_BALBcJ_T0078128.1 MGP_BALBcJ_G0030861.1 mouse_genomes_project 6 70324405 70353493 - MGP_BALBcJ_P0078128 Elmod3 protein_coding protein_coding MGP_BALBcJ_T0078129.1 MGP_BALBcJ_G0030861.1 mouse_genomes_project 6 70339578 70350143 - Elmod3 protein_coding processed_transcript MGP_BALBcJ_T0078130.1 MGP_BALBcJ_G0030861.1 mouse_genomes_project 6 70342744 70353545 - MGP_BALBcJ_P0078130 Elmod3 protein_coding protein_coding MGP_BALBcJ_T0077343.1 MGP_BALBcJ_G0030669.1 mouse_genomes_project 6 45024264 45036411 + MGP_BALBcJ_P0077343 Zfp212 protein_coding protein_coding MGP_BALBcJ_T0077344.1 MGP_BALBcJ_G0030669.1 mouse_genomes_project 6 45030084 45030925 + Zfp212 protein_coding retained_intron MGP_BALBcJ_T0077241.1 MGP_BALBcJ_G0030632.1 mouse_genomes_project 6 39334282 39360238 - MGP_BALBcJ_P0077241 Epha1 protein_coding protein_coding MGP_BALBcJ_T0077242.1 MGP_BALBcJ_G0030632.1 mouse_genomes_project 6 39334511 39360238 - MGP_BALBcJ_P0077242 Epha1 protein_coding protein_coding MGP_BALBcJ_T0077243.1 MGP_BALBcJ_G0030632.1 mouse_genomes_project 6 39349955 39360205 - Epha1 protein_coding retained_intron MGP_BALBcJ_T0008553.1 MGP_BALBcJ_G0006913.1 mouse_genomes_project 6 36176362 36178790 + Gm43479 lincRNA lincRNA MGP_BALBcJ_T0080550.1 MGP_BALBcJ_G0031367.1 mouse_genomes_project 6 131115144 131116074 + MGP_BALBcJ_P0080550 Tas2r124 protein_coding protein_coding MGP_BALBcJ_T0077599.1 MGP_BALBcJ_G0030731.1 mouse_genomes_project 6 49454864 49459029 - MGP_BALBcJ_P0077599 Hoxa13 protein_coding protein_coding MGP_BALBcJ_T0077600.1 MGP_BALBcJ_G0030731.1 mouse_genomes_project 6 49456023 49459099 - MGP_BALBcJ_P0077600 Hoxa13 protein_coding protein_coding MGP_BALBcJ_T0077601.1 MGP_BALBcJ_G0030731.1 mouse_genomes_project 6 49456041 49459029 - Hoxa13 protein_coding processed_transcript MGP_BALBcJ_T0077602.1 MGP_BALBcJ_G0030731.1 mouse_genomes_project 6 49456041 49459029 - Hoxa13 protein_coding processed_transcript MGP_BALBcJ_T0077603.1 MGP_BALBcJ_G0030731.1 mouse_genomes_project 6 49456041 49459029 - Hoxa13 protein_coding processed_transcript MGP_BALBcJ_T0077604.1 MGP_BALBcJ_G0030731.1 mouse_genomes_project 6 49456041 49459029 - MGP_BALBcJ_P0077604 Hoxa13 protein_coding protein_coding MGP_BALBcJ_T0078329.1 MGP_BALBcJ_G0030906.1 mouse_genomes_project 6 81036927 81118218 + MGP_BALBcJ_P0078329 Slc4a5 protein_coding protein_coding MGP_BALBcJ_T0078330.1 MGP_BALBcJ_G0030906.1 mouse_genomes_project 6 81049675 81074108 + Slc4a5 protein_coding processed_transcript MGP_BALBcJ_T0078331.1 MGP_BALBcJ_G0030906.1 mouse_genomes_project 6 81049860 81122658 + MGP_BALBcJ_P0078331 Slc4a5 protein_coding protein_coding MGP_BALBcJ_T0078332.1 MGP_BALBcJ_G0030906.1 mouse_genomes_project 6 81094662 81105807 + Slc4a5 protein_coding processed_transcript MGP_BALBcJ_T0078333.1 MGP_BALBcJ_G0030906.1 mouse_genomes_project 6 81104988 81114458 + Slc4a5 protein_coding processed_transcript MGP_BALBcJ_T0018263.1 MGP_BALBcJ_G0015582.1 mouse_genomes_project 6 106657918 106661265 + Gm17055 processed_transcript lincRNA MGP_BALBcJ_T0018264.1 MGP_BALBcJ_G0015582.1 mouse_genomes_project 6 106658046 106661385 + Gm17055 processed_transcript retained_intron MGP_BALBcJ_T0076676.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26339932 26412907 - MGP_BALBcJ_P0076676 Tnpo3 protein_coding protein_coding MGP_BALBcJ_T0076677.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26339932 26412627 - MGP_BALBcJ_P0076677 Tnpo3 protein_coding protein_coding MGP_BALBcJ_T0076678.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26340141 26359233 - MGP_BALBcJ_P0076678 Tnpo3 protein_coding protein_coding MGP_BALBcJ_T0076680.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26340729 26412831 - MGP_BALBcJ_P0076680 Tnpo3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076681.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26354021 26356204 - Tnpo3 protein_coding retained_intron MGP_BALBcJ_T0076682.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26364015 26412643 - Tnpo3 protein_coding retained_intron MGP_BALBcJ_T0076683.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26367538 26370436 - Tnpo3 protein_coding retained_intron MGP_BALBcJ_T0076684.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26377245 26381054 - Tnpo3 protein_coding retained_intron MGP_BALBcJ_T0076685.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26378746 26412839 - Tnpo3 protein_coding retained_intron MGP_BALBcJ_T0076686.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26382010 26412654 - Tnpo3 protein_coding retained_intron MGP_BALBcJ_T0076687.1 MGP_BALBcJ_G0030511.1 mouse_genomes_project 6 26387753 26412633 - Tnpo3 protein_coding processed_transcript MGP_BALBcJ_T0080278.1 MGP_BALBcJ_G0031281.1 mouse_genomes_project 6 124722716 124727115 - MGP_BALBcJ_P0080278 Kcna1 protein_coding protein_coding MGP_BALBcJ_T0080279.1 MGP_BALBcJ_G0031281.1 mouse_genomes_project 6 124723983 124727132 - MGP_BALBcJ_P0080279 Kcna1 protein_coding protein_coding MGP_BALBcJ_T0080280.1 MGP_BALBcJ_G0031281.1 mouse_genomes_project 6 124726093 124728702 - Kcna1 protein_coding processed_transcript MGP_BALBcJ_T0076954.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32053673 32128827 + MGP_BALBcJ_P0076954 Nup205 protein_coding protein_coding MGP_BALBcJ_T0076955.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32053682 32128827 + MGP_BALBcJ_P0076955 Nup205 protein_coding protein_coding MGP_BALBcJ_T0076956.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32053868 32086485 + Nup205 protein_coding retained_intron MGP_BALBcJ_T0076957.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32053881 32128821 + MGP_BALBcJ_P0076957 Nup205 protein_coding protein_coding MGP_BALBcJ_T0076958.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32053884 32128834 + MGP_BALBcJ_P0076958 Nup205 protein_coding unknown_likely_coding MGP_BALBcJ_T0076959.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32085878 32128827 + Nup205 protein_coding processed_transcript MGP_BALBcJ_T0076960.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32105865 32119400 + Nup205 protein_coding retained_intron MGP_BALBcJ_T0076961.1 MGP_BALBcJ_G0030552.1 mouse_genomes_project 6 32126404 32127703 + Nup205 protein_coding retained_intron MGP_BALBcJ_T0015366.1 MGP_BALBcJ_G0013463.1 mouse_genomes_project 6 62751830 62752240 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015645.1 MGP_BALBcJ_G0013742.1 mouse_genomes_project 6 144111042 144112038 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015369.1 MGP_BALBcJ_G0013466.1 mouse_genomes_project 6 62899192 62900981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018250.1 MGP_BALBcJ_G0015578.1 mouse_genomes_project 6 64571429 64625069 + A430010J10Rik processed_transcript lincRNA MGP_BALBcJ_T0018251.1 MGP_BALBcJ_G0015578.1 mouse_genomes_project 6 64571433 64572791 + A430010J10Rik processed_transcript retained_intron MGP_BALBcJ_T0018252.1 MGP_BALBcJ_G0015578.1 mouse_genomes_project 6 64621067 64624753 + A430010J10Rik processed_transcript retained_intron MGP_BALBcJ_T0018253.1 MGP_BALBcJ_G0015578.1 mouse_genomes_project 6 64621346 64622259 + A430010J10Rik processed_transcript pseudogene MGP_BALBcJ_T0015450.1 MGP_BALBcJ_G0013547.1 mouse_genomes_project 6 83750120 83750756 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005078.1 MGP_BALBcJ_G0004335.1 mouse_genomes_project 6 132875366 132885925 - Gm17089 antisense antisense MGP_BALBcJ_T0018280.1 MGP_BALBcJ_G0015589.1 mouse_genomes_project 6 127750633 127752500 - 1700101I11Rik processed_transcript TEC MGP_BALBcJ_T0018281.1 MGP_BALBcJ_G0015589.1 mouse_genomes_project 6 127750777 127751968 - 1700101I11Rik processed_transcript antisense MGP_BALBcJ_T0015561.1 MGP_BALBcJ_G0013658.1 mouse_genomes_project 6 121496313 121497073 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015256.1 MGP_BALBcJ_G0013353.1 mouse_genomes_project 6 21341445 21342154 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008751.1 MGP_BALBcJ_G0007066.1 mouse_genomes_project 6 144045968 144047285 + Gm15706 lincRNA lincRNA MGP_BALBcJ_T0002062.1 MGP_BALBcJ_G0001975.1 mouse_genomes_project 6 85969291 85972135 - TEC TEC MGP_BALBcJ_T0008725.1 MGP_BALBcJ_G0007050.1 mouse_genomes_project 6 133255695 133258139 - Gm43949 lincRNA lincRNA MGP_BALBcJ_T0008467.1 MGP_BALBcJ_G0006861.1 mouse_genomes_project 6 742769 759287 - Gm43986 lincRNA lincRNA MGP_BALBcJ_T0080844.1 MGP_BALBcJ_G0031438.1 mouse_genomes_project 6 140703879 140744709 - MGP_BALBcJ_P0080844 Slco1a1 protein_coding protein_coding MGP_BALBcJ_T0080845.1 MGP_BALBcJ_G0031438.1 mouse_genomes_project 6 140704450 140744861 - MGP_BALBcJ_P0080845 Slco1a1 protein_coding protein_coding MGP_BALBcJ_T0080846.1 MGP_BALBcJ_G0031438.1 mouse_genomes_project 6 140719794 140744715 - Slco1a1 protein_coding retained_intron MGP_BALBcJ_T0080361.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126481509 126487506 + Foxm1 protein_coding processed_transcript MGP_BALBcJ_T0080362.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126481509 126494633 + MGP_BALBcJ_P0080362 Foxm1 protein_coding protein_coding MGP_BALBcJ_T0080363.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126484248 126492463 + MGP_BALBcJ_P0080363 Foxm1 protein_coding protein_coding MGP_BALBcJ_T0080364.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126484710 126491855 + MGP_BALBcJ_P0080364 Foxm1 protein_coding protein_coding MGP_BALBcJ_T0080365.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126485830 126491368 + MGP_BALBcJ_P0080365 Foxm1 protein_coding protein_coding MGP_BALBcJ_T0080366.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126485908 126490668 + Foxm1 protein_coding retained_intron MGP_BALBcJ_T0080367.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126487983 126489868 + Foxm1 protein_coding retained_intron MGP_BALBcJ_T0080368.1 MGP_BALBcJ_G0031300.1 mouse_genomes_project 6 126489456 126491679 + Foxm1 protein_coding retained_intron MGP_BALBcJ_T0002173.1 MGP_BALBcJ_G0002085.1 mouse_genomes_project 6 144099979 144100889 + TEC TEC MGP_BALBcJ_T0004933.1 MGP_BALBcJ_G0004236.1 mouse_genomes_project 6 49370083 49389583 + Hoxaas3 antisense antisense MGP_BALBcJ_T0004934.1 MGP_BALBcJ_G0004236.1 mouse_genomes_project 6 49370101 49411587 + Hoxaas3 antisense antisense MGP_BALBcJ_T0004937.1 MGP_BALBcJ_G0004236.1 mouse_genomes_project 6 49397679 49410126 + Hoxaas3 antisense antisense MGP_BALBcJ_T0002028.1 MGP_BALBcJ_G0001941.1 mouse_genomes_project 6 78108004 78109760 + TEC TEC MGP_BALBcJ_T0002072.1 MGP_BALBcJ_G0001985.1 mouse_genomes_project 6 88369656 88372207 + TEC TEC MGP_BALBcJ_T0102608.1 MGP_BALBcJ_G0040424.1 mouse_genomes_project 6 40156060 40156963 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0077958.1 MGP_BALBcJ_G0030829.1 mouse_genomes_project 6 68497141 68524962 - MGP_BALBcJ_P0077958 Rpia protein_coding protein_coding MGP_BALBcJ_T0077959.1 MGP_BALBcJ_G0030829.1 mouse_genomes_project 6 68497694 68505175 - Rpia protein_coding retained_intron MGP_BALBcJ_T0077960.1 MGP_BALBcJ_G0030829.1 mouse_genomes_project 6 68514248 68524733 - Rpia protein_coding retained_intron MGP_BALBcJ_T0015261.1 MGP_BALBcJ_G0013358.1 mouse_genomes_project 6 25148266 25149518 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077810.1 MGP_BALBcJ_G0030792.1 mouse_genomes_project 6 55272916 55273969 - MGP_BALBcJ_P0077810 Vmn1r25 protein_coding protein_coding MGP_BALBcJ_T0015337.1 MGP_BALBcJ_G0013434.1 mouse_genomes_project 6 55740478 55740847 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015564.1 MGP_BALBcJ_G0013661.1 mouse_genomes_project 6 122280126 122281172 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077140.1 MGP_BALBcJ_G0030592.1 mouse_genomes_project 6 37455410 37456483 + MGP_BALBcJ_P0077140 Tas2r137 protein_coding protein_coding MGP_BALBcJ_T0100022.1 MGP_BALBcJ_G0038058.1 mouse_genomes_project 6 101642782 101642844 + Gm24784 snRNA snRNA MGP_BALBcJ_T0008707.1 MGP_BALBcJ_G0007037.1 mouse_genomes_project 6 125329484 125332493 - Gm43635 lincRNA lincRNA MGP_BALBcJ_T0101293.1 MGP_BALBcJ_G0039329.1 mouse_genomes_project 6 122120436 122120555 + Gm22916 snoRNA snoRNA MGP_BALBcJ_T0010735.1 MGP_BALBcJ_G0008860.1 mouse_genomes_project 6 26802198 26802304 + Gm23049 miRNA miRNA MGP_BALBcJ_T0010762.1 MGP_BALBcJ_G0008887.1 mouse_genomes_project 6 80853017 80853080 + Mir7040 miRNA miRNA MGP_BALBcJ_T0099987.1 MGP_BALBcJ_G0038023.1 mouse_genomes_project 6 14178505 14178595 + Gm25021 snRNA snRNA MGP_BALBcJ_T0015367.1 MGP_BALBcJ_G0013464.1 mouse_genomes_project 6 62753286 62754481 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102622.1 MGP_BALBcJ_G0040438.1 mouse_genomes_project 6 55595814 55596740 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101298.1 MGP_BALBcJ_G0039334.1 mouse_genomes_project 6 123340054 123340183 - Gm24175 snoRNA snoRNA MGP_BALBcJ_T0000145.1 MGP_BALBcJ_G0000111.1 mouse_genomes_project 6 66006446 66006944 + MGP_BALBcJ_P0000145 Igkv16-104 IG_V_gene IG_V_gene MGP_BALBcJ_T0015254.1 MGP_BALBcJ_G0013351.1 mouse_genomes_project 6 19568533 19569227 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002714.1 MGP_BALBcJ_G0002590.1 mouse_genomes_project 6 38150710 38151004 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0080639.1 MGP_BALBcJ_G0031398.1 mouse_genomes_project 6 133862877 133902296 + MGP_BALBcJ_P0080639 Fam234b protein_coding protein_coding MGP_BALBcJ_T0080640.1 MGP_BALBcJ_G0031398.1 mouse_genomes_project 6 133862877 133911132 + MGP_BALBcJ_P0080640 Fam234b protein_coding protein_coding MGP_BALBcJ_T0080641.1 MGP_BALBcJ_G0031398.1 mouse_genomes_project 6 133863009 133874242 + MGP_BALBcJ_P0080641 Fam234b protein_coding protein_coding MGP_BALBcJ_T0080642.1 MGP_BALBcJ_G0031398.1 mouse_genomes_project 6 133863312 133874271 + MGP_BALBcJ_P0080642 Fam234b protein_coding protein_coding MGP_BALBcJ_T0080643.1 MGP_BALBcJ_G0031398.1 mouse_genomes_project 6 133897528 133902292 + Fam234b protein_coding retained_intron MGP_BALBcJ_T0077871.1 MGP_BALBcJ_G0030806.1 mouse_genomes_project 6 62221984 62224105 + MGP_BALBcJ_P0077871 Atoh1 protein_coding protein_coding MGP_BALBcJ_T0079639.1 MGP_BALBcJ_G0031160.1 mouse_genomes_project 6 115801904 115810510 + MGP_BALBcJ_P0079639 protein_coding protein_coding MGP_BALBcJ_T0077796.1 MGP_BALBcJ_G0030786.1 mouse_genomes_project 6 54993756 55030835 + MGP_BALBcJ_P0077796 Lancl2 protein_coding protein_coding MGP_BALBcJ_T0077797.1 MGP_BALBcJ_G0030786.1 mouse_genomes_project 6 54993852 55029878 + MGP_BALBcJ_P0077797 Lancl2 protein_coding protein_coding MGP_BALBcJ_T0077798.1 MGP_BALBcJ_G0030786.1 mouse_genomes_project 6 54994303 55030834 + MGP_BALBcJ_P0077798 Lancl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002128.1 MGP_BALBcJ_G0002040.1 mouse_genomes_project 6 115801067 115802259 - TEC TEC MGP_BALBcJ_T0100021.1 MGP_BALBcJ_G0038057.1 mouse_genomes_project 6 100918538 100918646 + Gm26022 snRNA snRNA MGP_BALBcJ_T0079510.1 MGP_BALBcJ_G0031136.1 mouse_genomes_project 6 113717957 113740574 - MGP_BALBcJ_P0079510 Efcab12 protein_coding protein_coding MGP_BALBcJ_T0079511.1 MGP_BALBcJ_G0031136.1 mouse_genomes_project 6 113718124 113740574 - MGP_BALBcJ_P0079511 Efcab12 protein_coding protein_coding MGP_BALBcJ_T0079512.1 MGP_BALBcJ_G0031136.1 mouse_genomes_project 6 113718124 113740574 - MGP_BALBcJ_P0079512 Efcab12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078029.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69630550 69632508 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0078030.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69630552 69658655 - MGP_BALBcJ_P0078030 Ptcd3 protein_coding protein_coding MGP_BALBcJ_T0078031.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69630553 69658655 - MGP_BALBcJ_P0078031 Ptcd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078032.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69630555 69639592 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0078033.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69630555 69658645 - MGP_BALBcJ_P0078033 Ptcd3 protein_coding unknown_likely_coding MGP_BALBcJ_T0078034.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69635017 69639517 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0078035.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69637166 69658649 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0078036.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69638520 69647057 - MGP_BALBcJ_P0078036 Ptcd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078037.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69642882 69645039 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0078038.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69645197 69648341 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0078039.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69648297 69658623 - MGP_BALBcJ_P0078039 Ptcd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078040.1 MGP_BALBcJ_G0030846.1 mouse_genomes_project 6 69652591 69653376 - Ptcd3 protein_coding retained_intron MGP_BALBcJ_T0002556.1 MGP_BALBcJ_G0002459.1 mouse_genomes_project 6 38507460 38507507 + MGP_BALBcJ_P0002556 Trbj2-7 TR_J_gene TR_J_gene MGP_BALBcJ_T0077434.1 MGP_BALBcJ_G0030690.1 mouse_genomes_project 6 45842242 45848237 + MGP_BALBcJ_P0077434 Gimap7 protein_coding protein_coding MGP_BALBcJ_T0077436.1 MGP_BALBcJ_G0030690.1 mouse_genomes_project 6 45842278 45847340 + MGP_BALBcJ_P0077436 Gimap7 protein_coding protein_coding MGP_BALBcJ_T0077437.1 MGP_BALBcJ_G0030690.1 mouse_genomes_project 6 45842286 45843278 + Gimap7 protein_coding retained_intron MGP_BALBcJ_T0077636.1 MGP_BALBcJ_G0030737.1 mouse_genomes_project 6 51020774 51026133 - MGP_BALBcJ_P0077636 Tril protein_coding protein_coding MGP_BALBcJ_T0008556.1 MGP_BALBcJ_G0006915.1 mouse_genomes_project 6 40128629 40130658 + Gm13236 lincRNA lincRNA MGP_BALBcJ_T0076852.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30094436 30824330 + MGP_BALBcJ_P0076852 Exoc4 protein_coding protein_coding MGP_BALBcJ_T0076853.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30094479 30197662 + Exoc4 protein_coding retained_intron MGP_BALBcJ_T0076854.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30094479 30666289 + Exoc4 protein_coding processed_transcript MGP_BALBcJ_T0076855.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30094479 30326881 + MGP_BALBcJ_P0076855 Exoc4 protein_coding protein_coding MGP_BALBcJ_T0076856.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30094483 30429350 + MGP_BALBcJ_P0076856 Exoc4 protein_coding protein_coding MGP_BALBcJ_T0076857.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30094487 30164884 + Exoc4 protein_coding processed_transcript MGP_BALBcJ_T0076858.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30177210 30355430 + Exoc4 protein_coding processed_transcript MGP_BALBcJ_T0076859.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30178272 30194824 + Exoc4 protein_coding retained_intron MGP_BALBcJ_T0076860.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30547827 30711353 + Exoc4 protein_coding processed_transcript MGP_BALBcJ_T0076861.1 MGP_BALBcJ_G0030536.1 mouse_genomes_project 6 30711292 30723166 + Exoc4 protein_coding processed_transcript MGP_BALBcJ_T0000170.1 MGP_BALBcJ_G0000129.1 mouse_genomes_project 6 67402780 67403346 - MGP_BALBcJ_P0000170 Igkv5-48 IG_V_gene IG_V_gene MGP_BALBcJ_T0077770.1 MGP_BALBcJ_G0030769.1 mouse_genomes_project 6 54305244 54306457 + MGP_BALBcJ_P0077770 protein_coding protein_coding MGP_BALBcJ_T0004900.1 MGP_BALBcJ_G0004210.1 mouse_genomes_project 6 29114286 29127409 + Plxna4os3 antisense antisense MGP_BALBcJ_T0004901.1 MGP_BALBcJ_G0004210.1 mouse_genomes_project 6 29114370 29127401 + Plxna4os3 antisense antisense MGP_BALBcJ_T0015399.1 MGP_BALBcJ_G0013496.1 mouse_genomes_project 6 65730141 65730970 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076937.1 MGP_BALBcJ_G0030549.1 mouse_genomes_project 6 31792892 31812104 + MGP_BALBcJ_P0076937 Stra8 protein_coding protein_coding MGP_BALBcJ_T0076938.1 MGP_BALBcJ_G0030549.1 mouse_genomes_project 6 31793689 31812102 + MGP_BALBcJ_P0076938 Stra8 protein_coding protein_coding MGP_BALBcJ_T0076939.1 MGP_BALBcJ_G0030549.1 mouse_genomes_project 6 31793733 31805959 + MGP_BALBcJ_P0076939 Stra8 protein_coding protein_coding MGP_BALBcJ_T0076940.1 MGP_BALBcJ_G0030549.1 mouse_genomes_project 6 31793739 31812102 + MGP_BALBcJ_P0076940 Stra8 protein_coding protein_coding MGP_BALBcJ_T0005050.1 MGP_BALBcJ_G0004311.1 mouse_genomes_project 6 118870407 118871373 + Gm43916 antisense antisense MGP_BALBcJ_T0011617.1 MGP_BALBcJ_G0009742.1 mouse_genomes_project 6 44737801 44737878 + Gm25283 misc_RNA misc_RNA MGP_BALBcJ_T0077607.1 MGP_BALBcJ_G0030733.1 mouse_genomes_project 6 49747060 49842467 - MGP_BALBcJ_P0077607 Hibadh protein_coding protein_coding MGP_BALBcJ_T0077608.1 MGP_BALBcJ_G0030733.1 mouse_genomes_project 6 49747528 49832234 - Hibadh protein_coding retained_intron MGP_BALBcJ_T0077609.1 MGP_BALBcJ_G0030733.1 mouse_genomes_project 6 49749684 49758067 - Hibadh protein_coding retained_intron MGP_BALBcJ_T0077610.1 MGP_BALBcJ_G0030733.1 mouse_genomes_project 6 49755567 49757669 - Hibadh protein_coding retained_intron MGP_BALBcJ_T0077611.1 MGP_BALBcJ_G0030733.1 mouse_genomes_project 6 49836260 49842393 - Hibadh protein_coding retained_intron MGP_BALBcJ_T0005055.1 MGP_BALBcJ_G0004316.1 mouse_genomes_project 6 122562891 122582791 + antisense antisense MGP_BALBcJ_T0079212.1 MGP_BALBcJ_G0031082.1 mouse_genomes_project 6 106790584 106833051 + MGP_BALBcJ_P0079212 Arl8b protein_coding protein_coding MGP_BALBcJ_T0000279.1 MGP_BALBcJ_G0000220.1 mouse_genomes_project 6 65753644 65753946 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015409.1 MGP_BALBcJ_G0013506.1 mouse_genomes_project 6 69418293 69418877 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076715.1 MGP_BALBcJ_G0030515.1 mouse_genomes_project 6 26733546 26776295 + MGP_BALBcJ_P0076715 Strip2 protein_coding protein_coding MGP_BALBcJ_T0076716.1 MGP_BALBcJ_G0030515.1 mouse_genomes_project 6 26733547 26762058 + Strip2 protein_coding retained_intron MGP_BALBcJ_T0076717.1 MGP_BALBcJ_G0030515.1 mouse_genomes_project 6 26733547 26774392 + Strip2 protein_coding retained_intron MGP_BALBcJ_T0076718.1 MGP_BALBcJ_G0030515.1 mouse_genomes_project 6 26733547 26776301 + MGP_BALBcJ_P0076718 Strip2 protein_coding protein_coding MGP_BALBcJ_T0076719.1 MGP_BALBcJ_G0030515.1 mouse_genomes_project 6 26733547 26763580 + MGP_BALBcJ_P0076719 Strip2 protein_coding protein_coding MGP_BALBcJ_T0008560.1 MGP_BALBcJ_G0006919.1 mouse_genomes_project 6 45502770 45520905 - Gm44696 lincRNA lincRNA MGP_BALBcJ_T0010792.1 MGP_BALBcJ_G0008917.1 mouse_genomes_project 6 122803388 122803457 - Mir200c miRNA miRNA MGP_BALBcJ_T0079542.1 MGP_BALBcJ_G0031141.1 mouse_genomes_project 6 113856453 113900161 - MGP_BALBcJ_P0079542 Plxnd1 protein_coding protein_coding MGP_BALBcJ_T0079543.1 MGP_BALBcJ_G0031141.1 mouse_genomes_project 6 113857276 113858481 - Plxnd1 protein_coding retained_intron MGP_BALBcJ_T0079544.1 MGP_BALBcJ_G0031141.1 mouse_genomes_project 6 113857442 113858007 - Plxnd1 protein_coding retained_intron MGP_BALBcJ_T0079545.1 MGP_BALBcJ_G0031141.1 mouse_genomes_project 6 113860205 113861670 - Plxnd1 protein_coding retained_intron MGP_BALBcJ_T0079546.1 MGP_BALBcJ_G0031141.1 mouse_genomes_project 6 113868605 113871069 - MGP_BALBcJ_P0079546 Plxnd1 protein_coding protein_coding MGP_BALBcJ_T0010753.1 MGP_BALBcJ_G0008878.1 mouse_genomes_project 6 52764795 52764905 + Gm44352 miRNA miRNA MGP_BALBcJ_T0015510.1 MGP_BALBcJ_G0013607.1 mouse_genomes_project 6 108045246 108045790 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015358.1 MGP_BALBcJ_G0013455.1 mouse_genomes_project 6 62464852 62465741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005082.1 MGP_BALBcJ_G0004339.1 mouse_genomes_project 6 133853258 133859797 + Gm19434 antisense antisense MGP_BALBcJ_T0002180.1 MGP_BALBcJ_G0002092.1 mouse_genomes_project 6 146963516 146966995 + TEC TEC MGP_BALBcJ_T0080649.1 MGP_BALBcJ_G0031401.1 mouse_genomes_project 6 134028038 134048862 + MGP_BALBcJ_P0080649 Emp1 protein_coding protein_coding MGP_BALBcJ_T0080650.1 MGP_BALBcJ_G0031401.1 mouse_genomes_project 6 134028408 134048862 + MGP_BALBcJ_P0080650 Emp1 protein_coding protein_coding MGP_BALBcJ_T0080651.1 MGP_BALBcJ_G0031401.1 mouse_genomes_project 6 134028408 134048862 + MGP_BALBcJ_P0080651 Emp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080652.1 MGP_BALBcJ_G0031401.1 mouse_genomes_project 6 134028485 134046062 + Emp1 protein_coding retained_intron MGP_BALBcJ_T0080653.1 MGP_BALBcJ_G0031401.1 mouse_genomes_project 6 134028545 134031151 + Emp1 protein_coding retained_intron MGP_BALBcJ_T0080654.1 MGP_BALBcJ_G0031401.1 mouse_genomes_project 6 134032984 134048862 + MGP_BALBcJ_P0080654 Emp1 protein_coding protein_coding MGP_BALBcJ_T0078749.1 MGP_BALBcJ_G0030988.1 mouse_genomes_project 6 86188966 86382228 - MGP_BALBcJ_P0078749 Eefsec protein_coding protein_coding MGP_BALBcJ_T0078750.1 MGP_BALBcJ_G0030988.1 mouse_genomes_project 6 86189505 86382216 - MGP_BALBcJ_P0078750 Eefsec protein_coding protein_coding MGP_BALBcJ_T0078751.1 MGP_BALBcJ_G0030988.1 mouse_genomes_project 6 86189905 86382203 - MGP_BALBcJ_P0078751 Eefsec protein_coding protein_coding MGP_BALBcJ_T0078752.1 MGP_BALBcJ_G0030988.1 mouse_genomes_project 6 86213272 86382191 - MGP_BALBcJ_P0078752 Eefsec protein_coding protein_coding MGP_BALBcJ_T0078753.1 MGP_BALBcJ_G0030988.1 mouse_genomes_project 6 86230617 86375538 - MGP_BALBcJ_P0078753 Eefsec protein_coding protein_coding MGP_BALBcJ_T0078754.1 MGP_BALBcJ_G0030988.1 mouse_genomes_project 6 86230800 86382173 - MGP_BALBcJ_P0078754 Eefsec protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077534.1 MGP_BALBcJ_G0030711.1 mouse_genomes_project 6 47709989 47713561 - MGP_BALBcJ_P0077534 protein_coding protein_coding MGP_BALBcJ_T0018246.1 MGP_BALBcJ_G0015577.1 mouse_genomes_project 6 64492981 64536578 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_BALBcJ_T0018247.1 MGP_BALBcJ_G0015577.1 mouse_genomes_project 6 64492987 64519685 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_BALBcJ_T0018248.1 MGP_BALBcJ_G0015577.1 mouse_genomes_project 6 64493037 64536063 + E230016M11Rik processed_transcript retained_intron MGP_BALBcJ_T0018249.1 MGP_BALBcJ_G0015577.1 mouse_genomes_project 6 64532683 64536021 + E230016M11Rik processed_transcript retained_intron MGP_BALBcJ_T0002165.1 MGP_BALBcJ_G0002077.1 mouse_genomes_project 6 139092199 139093193 - TEC TEC MGP_BALBcJ_T0077203.1 MGP_BALBcJ_G0030626.1 mouse_genomes_project 6 39217547 39222054 + MGP_BALBcJ_P0077203 Gstk1 protein_coding protein_coding MGP_BALBcJ_T0077204.1 MGP_BALBcJ_G0030626.1 mouse_genomes_project 6 39217591 39222054 + MGP_BALBcJ_P0077204 Gstk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077205.1 MGP_BALBcJ_G0030626.1 mouse_genomes_project 6 39217601 39222060 + Gstk1 protein_coding retained_intron MGP_BALBcJ_T0077206.1 MGP_BALBcJ_G0030626.1 mouse_genomes_project 6 39217635 39221932 + Gstk1 protein_coding processed_transcript MGP_BALBcJ_T0015340.1 MGP_BALBcJ_G0013437.1 mouse_genomes_project 6 55845792 55846053 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015439.1 MGP_BALBcJ_G0013536.1 mouse_genomes_project 6 81679752 81680518 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002148.1 MGP_BALBcJ_G0002060.1 mouse_genomes_project 6 127758916 127759607 + TEC TEC MGP_BALBcJ_T0002131.1 MGP_BALBcJ_G0002043.1 mouse_genomes_project 6 119118149 119119658 - TEC TEC MGP_BALBcJ_T0079657.1 MGP_BALBcJ_G0031165.1 mouse_genomes_project 6 116274622 116310889 - MGP_BALBcJ_P0079657 Bms1 protein_coding protein_coding MGP_BALBcJ_T0079658.1 MGP_BALBcJ_G0031165.1 mouse_genomes_project 6 116287441 116310819 - Bms1 protein_coding retained_intron MGP_BALBcJ_T0079659.1 MGP_BALBcJ_G0031165.1 mouse_genomes_project 6 116305248 116310827 - Bms1 protein_coding processed_transcript MGP_BALBcJ_T0080388.1 MGP_BALBcJ_G0031305.1 mouse_genomes_project 6 126547186 126556134 - Fkbp4 protein_coding retained_intron MGP_BALBcJ_T0080389.1 MGP_BALBcJ_G0031305.1 mouse_genomes_project 6 126547569 126556134 - MGP_BALBcJ_P0080389 Fkbp4 protein_coding protein_coding MGP_BALBcJ_T0080390.1 MGP_BALBcJ_G0031305.1 mouse_genomes_project 6 126550671 126555597 - MGP_BALBcJ_P0080390 Fkbp4 protein_coding protein_coding MGP_BALBcJ_T0080391.1 MGP_BALBcJ_G0031305.1 mouse_genomes_project 6 126551218 126555110 - MGP_BALBcJ_P0080391 Fkbp4 protein_coding protein_coding MGP_BALBcJ_T0079613.1 MGP_BALBcJ_G0031155.1 mouse_genomes_project 6 114563224 114565410 + MGP_BALBcJ_P0079613 8430408G22Rik protein_coding protein_coding MGP_BALBcJ_T0079614.1 MGP_BALBcJ_G0031155.1 mouse_genomes_project 6 114563243 114565410 + MGP_BALBcJ_P0079614 8430408G22Rik protein_coding protein_coding MGP_BALBcJ_T0079615.1 MGP_BALBcJ_G0031155.1 mouse_genomes_project 6 114563311 114564525 + MGP_BALBcJ_P0079615 8430408G22Rik protein_coding protein_coding MGP_BALBcJ_T0080780.1 MGP_BALBcJ_G0031425.1 mouse_genomes_project 6 138303964 138312913 - MGP_BALBcJ_P0080780 Rergl protein_coding protein_coding MGP_BALBcJ_T0102617.1 MGP_BALBcJ_G0040433.1 mouse_genomes_project 6 55344886 55345799 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0076862.1 MGP_BALBcJ_G0030537.1 mouse_genomes_project 6 30902167 31007492 + MGP_BALBcJ_P0076862 Lrguk protein_coding protein_coding MGP_BALBcJ_T0076863.1 MGP_BALBcJ_G0030537.1 mouse_genomes_project 6 30902169 30920050 + MGP_BALBcJ_P0076863 Lrguk protein_coding protein_coding MGP_BALBcJ_T0076864.1 MGP_BALBcJ_G0030537.1 mouse_genomes_project 6 30912027 30920065 + MGP_BALBcJ_P0076864 Lrguk protein_coding protein_coding MGP_BALBcJ_T0078831.1 MGP_BALBcJ_G0030997.1 mouse_genomes_project 6 87032272 87044010 + protein_coding lincRNA MGP_BALBcJ_T0078832.1 MGP_BALBcJ_G0030997.1 mouse_genomes_project 6 87032272 87046204 + protein_coding lincRNA MGP_BALBcJ_T0078833.1 MGP_BALBcJ_G0030997.1 mouse_genomes_project 6 87036987 87044297 + protein_coding lincRNA MGP_BALBcJ_T0078834.1 MGP_BALBcJ_G0030997.1 mouse_genomes_project 6 87037395 87046203 + MGP_BALBcJ_P0078834 protein_coding protein_coding MGP_BALBcJ_T0078378.1 MGP_BALBcJ_G0030914.1 mouse_genomes_project 6 81468704 81480821 - MGP_BALBcJ_P0078378 Clec4f protein_coding protein_coding MGP_BALBcJ_T0078379.1 MGP_BALBcJ_G0030914.1 mouse_genomes_project 6 81469379 81480755 - Clec4f protein_coding processed_transcript MGP_BALBcJ_T0079780.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118235204 118267498 - MGP_BALBcJ_P0079780 Ccdc77 protein_coding protein_coding MGP_BALBcJ_T0079781.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118235204 118274920 - MGP_BALBcJ_P0079781 Ccdc77 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079782.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118235916 118267541 - MGP_BALBcJ_P0079782 Ccdc77 protein_coding protein_coding MGP_BALBcJ_T0079783.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118241429 118267479 - MGP_BALBcJ_P0079783 Ccdc77 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079784.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118244396 118267436 - MGP_BALBcJ_P0079784 Ccdc77 protein_coding protein_coding MGP_BALBcJ_T0079785.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118244429 118267409 - MGP_BALBcJ_P0079785 Ccdc77 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079786.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118247388 118267446 - Ccdc77 protein_coding retained_intron MGP_BALBcJ_T0079787.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118254917 118260221 - Ccdc77 protein_coding retained_intron MGP_BALBcJ_T0079788.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118260038 118274902 - MGP_BALBcJ_P0079788 Ccdc77 protein_coding protein_coding MGP_BALBcJ_T0079789.1 MGP_BALBcJ_G0031182.1 mouse_genomes_project 6 118263629 118267436 - Ccdc77 protein_coding retained_intron MGP_BALBcJ_T0078268.1 MGP_BALBcJ_G0030892.1 mouse_genomes_project 6 80861147 80870918 + MGP_BALBcJ_P0078268 Dqx1 protein_coding protein_coding MGP_BALBcJ_T0078269.1 MGP_BALBcJ_G0030892.1 mouse_genomes_project 6 80861400 80863292 + MGP_BALBcJ_P0078269 Dqx1 protein_coding non_stop_decay MGP_BALBcJ_T0008534.1 MGP_BALBcJ_G0006904.1 mouse_genomes_project 6 30857230 30865256 - Gm13853 lincRNA lincRNA MGP_BALBcJ_T0011604.1 MGP_BALBcJ_G0009729.1 mouse_genomes_project 6 14434145 14434254 + Gm27762 misc_RNA misc_RNA MGP_BALBcJ_T0077020.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35342797 35423410 + MGP_BALBcJ_P0077020 protein_coding protein_coding MGP_BALBcJ_T0077021.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35343020 35413224 + MGP_BALBcJ_P0077021 protein_coding protein_coding MGP_BALBcJ_T0077022.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35349375 35436779 + MGP_BALBcJ_P0077022 protein_coding protein_coding MGP_BALBcJ_T0077023.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35371494 35372274 + protein_coding retained_intron MGP_BALBcJ_T0077024.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35372432 35394165 + protein_coding retained_intron MGP_BALBcJ_T0077025.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35392457 35396771 + protein_coding retained_intron MGP_BALBcJ_T0077026.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35392555 35397655 + protein_coding processed_transcript MGP_BALBcJ_T0077027.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35393403 35413224 + protein_coding retained_intron MGP_BALBcJ_T0077028.1 MGP_BALBcJ_G0030569.1 mouse_genomes_project 6 35400911 35436813 + MGP_BALBcJ_P0077028 protein_coding protein_coding MGP_BALBcJ_T0015651.1 MGP_BALBcJ_G0013748.1 mouse_genomes_project 6 145939392 145944759 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011649.1 MGP_BALBcJ_G0009774.1 mouse_genomes_project 6 120654967 120655079 + Gm26168 misc_RNA misc_RNA MGP_BALBcJ_T0015529.1 MGP_BALBcJ_G0013626.1 mouse_genomes_project 6 113674654 113675062 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004941.1 MGP_BALBcJ_G0004240.1 mouse_genomes_project 6 51357171 51361216 - 9530036M11Rik antisense antisense MGP_BALBcJ_T0001980.1 MGP_BALBcJ_G0001893.1 mouse_genomes_project 6 49453388 49454631 - TEC TEC MGP_BALBcJ_T0010765.1 MGP_BALBcJ_G0008890.1 mouse_genomes_project 6 83189454 83189536 - Mir705 miRNA miRNA MGP_BALBcJ_T0002184.1 MGP_BALBcJ_G0002096.1 mouse_genomes_project 6 147655984 147657447 - TEC TEC MGP_BALBcJ_T0015389.1 MGP_BALBcJ_G0013486.1 mouse_genomes_project 6 64880101 64880438 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008606.1 MGP_BALBcJ_G0006955.1 mouse_genomes_project 6 69038643 69047747 + Gm1070 lincRNA lincRNA MGP_BALBcJ_T0077854.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58674896 59881680 + MGP_BALBcJ_P0077854 Ccser1 protein_coding protein_coding MGP_BALBcJ_T0077855.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58675109 58810915 + Ccser1 protein_coding retained_intron MGP_BALBcJ_T0077856.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58675110 58810546 + Ccser1 protein_coding retained_intron MGP_BALBcJ_T0077857.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58808792 59879082 + MGP_BALBcJ_P0077857 Ccser1 protein_coding protein_coding MGP_BALBcJ_T0077858.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58811738 59059943 + Ccser1 protein_coding retained_intron MGP_BALBcJ_T0077859.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58817555 59059705 + Ccser1 protein_coding processed_transcript MGP_BALBcJ_T0077860.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58872273 59300033 + MGP_BALBcJ_P0077860 Ccser1 protein_coding protein_coding MGP_BALBcJ_T0077861.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58872281 59207820 + Ccser1 protein_coding retained_intron MGP_BALBcJ_T0077862.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 58872316 58962234 + Ccser1 protein_coding processed_transcript MGP_BALBcJ_T0077863.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 59059606 59308897 + MGP_BALBcJ_P0077863 Ccser1 protein_coding protein_coding MGP_BALBcJ_T0077864.1 MGP_BALBcJ_G0030804.1 mouse_genomes_project 6 59270228 59308436 + Ccser1 protein_coding processed_transcript MGP_BALBcJ_T0076439.1 MGP_BALBcJ_G0030457.1 mouse_genomes_project 6 14911675 15065170 + MGP_BALBcJ_P0076439 Cftr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076440.1 MGP_BALBcJ_G0030457.1 mouse_genomes_project 6 14911675 15065171 + MGP_BALBcJ_P0076440 Cftr protein_coding protein_coding MGP_BALBcJ_T0076441.1 MGP_BALBcJ_G0030457.1 mouse_genomes_project 6 14911675 15065170 + MGP_BALBcJ_P0076441 Cftr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076442.1 MGP_BALBcJ_G0030457.1 mouse_genomes_project 6 14911759 14979011 + MGP_BALBcJ_P0076442 Cftr protein_coding protein_coding MGP_BALBcJ_T0076443.1 MGP_BALBcJ_G0030457.1 mouse_genomes_project 6 14911812 15063436 + MGP_BALBcJ_P0076443 Cftr protein_coding protein_coding MGP_BALBcJ_T0076444.1 MGP_BALBcJ_G0030457.1 mouse_genomes_project 6 14998914 15009658 + Cftr protein_coding retained_intron MGP_BALBcJ_T0002078.1 MGP_BALBcJ_G0001991.1 mouse_genomes_project 6 89688847 89690523 - TEC TEC MGP_BALBcJ_T0079572.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114244760 114320895 + MGP_BALBcJ_P0079572 protein_coding protein_coding MGP_BALBcJ_T0079573.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114244769 114320895 + MGP_BALBcJ_P0079573 protein_coding protein_coding MGP_BALBcJ_T0079574.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114244780 114317108 + MGP_BALBcJ_P0079574 protein_coding protein_coding MGP_BALBcJ_T0079575.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114244789 114317096 + MGP_BALBcJ_P0079575 protein_coding protein_coding MGP_BALBcJ_T0079576.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114244800 114286217 + MGP_BALBcJ_P0079576 protein_coding protein_coding MGP_BALBcJ_T0079577.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114245027 114320898 + MGP_BALBcJ_P0079577 protein_coding protein_coding MGP_BALBcJ_T0079578.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114258493 114261600 + protein_coding retained_intron MGP_BALBcJ_T0079579.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114259000 114314406 + MGP_BALBcJ_P0079579 protein_coding protein_coding MGP_BALBcJ_T0079580.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114259041 114286278 + MGP_BALBcJ_P0079580 protein_coding protein_coding MGP_BALBcJ_T0079581.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114286107 114312409 + protein_coding retained_intron MGP_BALBcJ_T0079582.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114295609 114317579 + MGP_BALBcJ_P0079582 protein_coding protein_coding MGP_BALBcJ_T0079583.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114295635 114317489 + protein_coding retained_intron MGP_BALBcJ_T0079584.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114303094 114312835 + protein_coding processed_transcript MGP_BALBcJ_T0079585.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114313969 114317137 + protein_coding processed_transcript MGP_BALBcJ_T0079586.1 MGP_BALBcJ_G0031146.1 mouse_genomes_project 6 114316531 114317660 + protein_coding processed_transcript MGP_BALBcJ_T0000275.1 MGP_BALBcJ_G0000216.1 mouse_genomes_project 6 65646420 65646886 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0008527.1 MGP_BALBcJ_G0006898.1 mouse_genomes_project 6 28461700 28472766 + lincRNA lincRNA MGP_BALBcJ_T0077865.1 MGP_BALBcJ_G0030805.1 mouse_genomes_project 6 60756467 60815410 + Grid2 protein_coding processed_transcript MGP_BALBcJ_T0077866.1 MGP_BALBcJ_G0030805.1 mouse_genomes_project 6 60756597 61685137 + Grid2 protein_coding processed_transcript MGP_BALBcJ_T0077867.1 MGP_BALBcJ_G0030805.1 mouse_genomes_project 6 60756618 62163881 + MGP_BALBcJ_P0077867 Grid2 protein_coding protein_coding MGP_BALBcJ_T0077868.1 MGP_BALBcJ_G0030805.1 mouse_genomes_project 6 60756786 61013924 + Grid2 protein_coding retained_intron MGP_BALBcJ_T0077869.1 MGP_BALBcJ_G0030805.1 mouse_genomes_project 6 60757417 61783299 + Grid2 protein_coding retained_intron MGP_BALBcJ_T0077870.1 MGP_BALBcJ_G0030805.1 mouse_genomes_project 6 61583644 61601468 + Grid2 protein_coding retained_intron MGP_BALBcJ_T0080100.1 MGP_BALBcJ_G0031250.1 mouse_genomes_project 6 122920389 122926419 - MGP_BALBcJ_P0080100 Gnb3 protein_coding protein_coding MGP_BALBcJ_T0080101.1 MGP_BALBcJ_G0031250.1 mouse_genomes_project 6 122920396 122926101 - Gnb3 protein_coding retained_intron MGP_BALBcJ_T0080102.1 MGP_BALBcJ_G0031250.1 mouse_genomes_project 6 122920828 122922441 - Gnb3 protein_coding processed_transcript MGP_BALBcJ_T0080103.1 MGP_BALBcJ_G0031250.1 mouse_genomes_project 6 122925242 122926227 - Gnb3 protein_coding retained_intron MGP_BALBcJ_T0081168.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148061894 148085299 + MGP_BALBcJ_P0081168 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081169.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148061908 148096449 + MGP_BALBcJ_P0081169 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081170.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148061936 148087605 + MGP_BALBcJ_P0081170 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081171.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148061954 148093548 + MGP_BALBcJ_P0081171 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081172.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148061954 148093548 + MGP_BALBcJ_P0081172 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081173.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148062053 148062936 + 2810474O19Rik protein_coding retained_intron MGP_BALBcJ_T0081174.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148062208 148084117 + MGP_BALBcJ_P0081174 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081175.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148063896 148066848 + 2810474O19Rik protein_coding retained_intron MGP_BALBcJ_T0081176.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148070886 148084595 + MGP_BALBcJ_P0081176 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081177.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148083283 148084401 + MGP_BALBcJ_P0081177 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0081178.1 MGP_BALBcJ_G0031494.1 mouse_genomes_project 6 148084085 148096444 + MGP_BALBcJ_P0081178 2810474O19Rik protein_coding protein_coding MGP_BALBcJ_T0002126.1 MGP_BALBcJ_G0002039.1 mouse_genomes_project 6 115789903 115792302 - TEC TEC MGP_BALBcJ_T0002127.1 MGP_BALBcJ_G0002039.1 mouse_genomes_project 6 115791652 115792303 - TEC TEC MGP_BALBcJ_T0010758.1 MGP_BALBcJ_G0008883.1 mouse_genomes_project 6 69016019 69016150 + Mir8112 miRNA miRNA MGP_BALBcJ_T0078317.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80978446 81013359 + MGP_BALBcJ_P0078317 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078318.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80978477 81013360 + MGP_BALBcJ_P0078318 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078319.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80978530 81002444 + MGP_BALBcJ_P0078319 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078320.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80992148 81013213 + MGP_BALBcJ_P0078320 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078321.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80992151 81013359 + MGP_BALBcJ_P0078321 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078322.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80992175 81002015 + MGP_BALBcJ_P0078322 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078323.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 80998806 81013360 + MGP_BALBcJ_P0078323 Dctn1 protein_coding protein_coding MGP_BALBcJ_T0078324.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 81001472 81002469 + Dctn1 protein_coding retained_intron MGP_BALBcJ_T0078325.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 81007578 81008823 + Dctn1 protein_coding retained_intron MGP_BALBcJ_T0078326.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 81007777 81008522 + Dctn1 protein_coding retained_intron MGP_BALBcJ_T0078327.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 81008336 81009311 + Dctn1 protein_coding retained_intron MGP_BALBcJ_T0078328.1 MGP_BALBcJ_G0030905.1 mouse_genomes_project 6 81010256 81011859 + Dctn1 protein_coding retained_intron MGP_BALBcJ_T0005024.1 MGP_BALBcJ_G0004293.1 mouse_genomes_project 6 99277031 99288625 + Gm26911 antisense antisense MGP_BALBcJ_T0005025.1 MGP_BALBcJ_G0004293.1 mouse_genomes_project 6 99277048 99298484 + Gm26911 antisense antisense MGP_BALBcJ_T0005026.1 MGP_BALBcJ_G0004293.1 mouse_genomes_project 6 99277120 99287241 + Gm26911 antisense antisense MGP_BALBcJ_T0078200.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79726499 79762687 + MGP_BALBcJ_P0078200 Gcfc2 protein_coding protein_coding MGP_BALBcJ_T0078201.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79726503 79762028 + MGP_BALBcJ_P0078201 Gcfc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078202.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79726510 79747069 + Gcfc2 protein_coding retained_intron MGP_BALBcJ_T0078203.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79733551 79734016 + Gcfc2 protein_coding retained_intron MGP_BALBcJ_T0078204.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79735720 79737148 + Gcfc2 protein_coding retained_intron MGP_BALBcJ_T0078205.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79744206 79746576 + Gcfc2 protein_coding retained_intron MGP_BALBcJ_T0078206.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79749373 79760832 + MGP_BALBcJ_P0078206 Gcfc2 protein_coding protein_coding MGP_BALBcJ_T0078207.1 MGP_BALBcJ_G0030880.1 mouse_genomes_project 6 79752536 79759719 + Gcfc2 protein_coding retained_intron MGP_BALBcJ_T0077485.1 MGP_BALBcJ_G0030702.1 mouse_genomes_project 6 46217098 46347773 - MGP_BALBcJ_P0077485 Igf2bp3 protein_coding protein_coding MGP_BALBcJ_T0077486.1 MGP_BALBcJ_G0030702.1 mouse_genomes_project 6 46220003 46226080 - Igf2bp3 protein_coding retained_intron MGP_BALBcJ_T0077487.1 MGP_BALBcJ_G0030702.1 mouse_genomes_project 6 46224979 46346978 - Igf2bp3 protein_coding retained_intron MGP_BALBcJ_T0077488.1 MGP_BALBcJ_G0030702.1 mouse_genomes_project 6 46239386 46243080 - Igf2bp3 protein_coding processed_transcript MGP_BALBcJ_T0077489.1 MGP_BALBcJ_G0030702.1 mouse_genomes_project 6 46300211 46347521 - Igf2bp3 protein_coding processed_transcript MGP_BALBcJ_T0015459.1 MGP_BALBcJ_G0013556.1 mouse_genomes_project 6 87855852 87856812 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000311.1 MGP_BALBcJ_G0000252.1 mouse_genomes_project 6 67749431 67749741 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0002098.1 MGP_BALBcJ_G0002011.1 mouse_genomes_project 6 99005457 99006064 - TEC TEC MGP_BALBcJ_T0079933.1 MGP_BALBcJ_G0031210.1 mouse_genomes_project 6 120756363 120771025 + MGP_BALBcJ_P0079933 Nanog protein_coding protein_coding MGP_BALBcJ_T0079934.1 MGP_BALBcJ_G0031210.1 mouse_genomes_project 6 120756439 120771025 + MGP_BALBcJ_P0079934 Nanog protein_coding protein_coding MGP_BALBcJ_T0079935.1 MGP_BALBcJ_G0031210.1 mouse_genomes_project 6 120756442 120771025 + MGP_BALBcJ_P0079935 Nanog protein_coding protein_coding MGP_BALBcJ_T0078289.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923087 80925321 - MGP_BALBcJ_P0078289 Wbp1 protein_coding protein_coding MGP_BALBcJ_T0078290.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923093 80925609 - MGP_BALBcJ_P0078290 Wbp1 protein_coding protein_coding MGP_BALBcJ_T0078291.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923094 80925609 - Wbp1 protein_coding retained_intron MGP_BALBcJ_T0078292.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923356 80925437 - MGP_BALBcJ_P0078292 Wbp1 protein_coding protein_coding MGP_BALBcJ_T0078293.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923599 80924258 - MGP_BALBcJ_P0078293 Wbp1 protein_coding protein_coding MGP_BALBcJ_T0078294.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923684 80924928 - Wbp1 protein_coding retained_intron MGP_BALBcJ_T0078295.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80923689 80925309 - Wbp1 protein_coding processed_transcript MGP_BALBcJ_T0078296.1 MGP_BALBcJ_G0030900.1 mouse_genomes_project 6 80924608 80925324 - MGP_BALBcJ_P0078296 Wbp1 protein_coding protein_coding MGP_BALBcJ_T0005072.1 MGP_BALBcJ_G0004331.1 mouse_genomes_project 6 126556213 126595954 + Gm10069 antisense antisense MGP_BALBcJ_T0005073.1 MGP_BALBcJ_G0004331.1 mouse_genomes_project 6 126556795 126624280 + Gm10069 antisense antisense MGP_BALBcJ_T0005074.1 MGP_BALBcJ_G0004331.1 mouse_genomes_project 6 126593936 126609207 + Gm10069 antisense antisense MGP_BALBcJ_T0002080.1 MGP_BALBcJ_G0001993.1 mouse_genomes_project 6 89710156 89712099 - TEC TEC MGP_BALBcJ_T0080454.1 MGP_BALBcJ_G0031325.1 mouse_genomes_project 6 127631486 127647232 + MGP_BALBcJ_P0080454 Clec9a protein_coding protein_coding MGP_BALBcJ_T0080455.1 MGP_BALBcJ_G0031325.1 mouse_genomes_project 6 127631487 127645038 + MGP_BALBcJ_P0080455 Clec9a protein_coding protein_coding MGP_BALBcJ_T0080456.1 MGP_BALBcJ_G0031325.1 mouse_genomes_project 6 127631579 127644827 + MGP_BALBcJ_P0080456 Clec9a protein_coding protein_coding MGP_BALBcJ_T0080457.1 MGP_BALBcJ_G0031325.1 mouse_genomes_project 6 127631579 127644827 + MGP_BALBcJ_P0080457 Clec9a protein_coding protein_coding MGP_BALBcJ_T0015516.1 MGP_BALBcJ_G0013613.1 mouse_genomes_project 6 111006811 111006938 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077335.1 MGP_BALBcJ_G0030666.1 mouse_genomes_project 6 44925568 44937101 - MGP_BALBcJ_P0077335 Zfp786 protein_coding protein_coding MGP_BALBcJ_T0077336.1 MGP_BALBcJ_G0030666.1 mouse_genomes_project 6 44927960 44936802 - Zfp786 protein_coding processed_transcript MGP_BALBcJ_T0077337.1 MGP_BALBcJ_G0030666.1 mouse_genomes_project 6 44934416 44936738 - Zfp786 protein_coding retained_intron MGP_BALBcJ_T0005083.1 MGP_BALBcJ_G0004340.1 mouse_genomes_project 6 133954332 134007332 + Gm44276 antisense antisense MGP_BALBcJ_T0081030.1 MGP_BALBcJ_G0031471.1 mouse_genomes_project 6 145366083 145397914 - MGP_BALBcJ_P0081030 Tm7sf3 protein_coding protein_coding MGP_BALBcJ_T0081031.1 MGP_BALBcJ_G0031471.1 mouse_genomes_project 6 145374630 145397815 - MGP_BALBcJ_P0081031 Tm7sf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081032.1 MGP_BALBcJ_G0031471.1 mouse_genomes_project 6 145383772 145405914 - Tm7sf3 protein_coding processed_transcript MGP_BALBcJ_T0081033.1 MGP_BALBcJ_G0031471.1 mouse_genomes_project 6 145385771 145405924 - Tm7sf3 protein_coding processed_transcript MGP_BALBcJ_T0080991.1 MGP_BALBcJ_G0031465.1 mouse_genomes_project 6 144552446 144625586 + MGP_BALBcJ_P0080991 Rassf8 protein_coding protein_coding MGP_BALBcJ_T0080992.1 MGP_BALBcJ_G0031465.1 mouse_genomes_project 6 144556256 144619695 + MGP_BALBcJ_P0080992 Rassf8 protein_coding protein_coding MGP_BALBcJ_T0080993.1 MGP_BALBcJ_G0031465.1 mouse_genomes_project 6 144612578 144622091 + MGP_BALBcJ_P0080993 Rassf8 protein_coding protein_coding MGP_BALBcJ_T0080994.1 MGP_BALBcJ_G0031465.1 mouse_genomes_project 6 144624450 144625581 + MGP_BALBcJ_P0080994 Rassf8 protein_coding protein_coding MGP_BALBcJ_T0015598.1 MGP_BALBcJ_G0013695.1 mouse_genomes_project 6 128829417 128830394 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004942.1 MGP_BALBcJ_G0004241.1 mouse_genomes_project 6 51676809 51686285 - Gm44026 antisense antisense MGP_BALBcJ_T0000169.1 MGP_BALBcJ_G0000128.1 mouse_genomes_project 6 66559249 66559715 - MGP_BALBcJ_P0000169 Igkv13-85 IG_V_gene IG_V_gene MGP_BALBcJ_T0008723.1 MGP_BALBcJ_G0007048.1 mouse_genomes_project 6 130391680 130392546 + Gm43974 lincRNA lincRNA MGP_BALBcJ_T0015218.1 MGP_BALBcJ_G0013315.1 mouse_genomes_project 6 5093725 5095509 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100033.1 MGP_BALBcJ_G0038069.1 mouse_genomes_project 6 122832121 122832183 - Rnu7 snRNA snRNA MGP_BALBcJ_T0102652.1 MGP_BALBcJ_G0040467.1 mouse_genomes_project 6 128604520 128615154 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010786.1 MGP_BALBcJ_G0008911.1 mouse_genomes_project 6 116320839 116320922 + Gm25953 miRNA miRNA MGP_BALBcJ_T0015437.1 MGP_BALBcJ_G0013534.1 mouse_genomes_project 6 81625978 81626356 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077004.1 MGP_BALBcJ_G0030564.1 mouse_genomes_project 6 35005051 35011526 + MGP_BALBcJ_P0077004 Tmem213 protein_coding protein_coding MGP_BALBcJ_T0015550.1 MGP_BALBcJ_G0013647.1 mouse_genomes_project 6 119980390 119980522 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010774.1 MGP_BALBcJ_G0008899.1 mouse_genomes_project 6 97540253 97540365 - Gm22328 miRNA miRNA MGP_BALBcJ_T0077266.1 MGP_BALBcJ_G0030644.1 mouse_genomes_project 6 39757228 39759121 + MGP_BALBcJ_P0077266 Olfr38 protein_coding protein_coding MGP_BALBcJ_T0002116.1 MGP_BALBcJ_G0002029.1 mouse_genomes_project 6 111439446 111442557 + TEC TEC MGP_BALBcJ_T0008742.1 MGP_BALBcJ_G0007061.1 mouse_genomes_project 6 141774615 141775002 + 4930434O05Rik lincRNA lincRNA MGP_BALBcJ_T0078235.1 MGP_BALBcJ_G0030889.1 mouse_genomes_project 6 80837275 80840659 + Loxl3 protein_coding processed_transcript MGP_BALBcJ_T0078236.1 MGP_BALBcJ_G0030889.1 mouse_genomes_project 6 80837275 80855866 + MGP_BALBcJ_P0078236 Loxl3 protein_coding protein_coding MGP_BALBcJ_T0078237.1 MGP_BALBcJ_G0030889.1 mouse_genomes_project 6 80837275 80855866 + MGP_BALBcJ_P0078237 Loxl3 protein_coding protein_coding MGP_BALBcJ_T0078238.1 MGP_BALBcJ_G0030889.1 mouse_genomes_project 6 80841519 80848357 + Loxl3 protein_coding processed_transcript MGP_BALBcJ_T0078239.1 MGP_BALBcJ_G0030889.1 mouse_genomes_project 6 80853174 80853974 + Loxl3 protein_coding retained_intron MGP_BALBcJ_T0001918.1 MGP_BALBcJ_G0001831.1 mouse_genomes_project 6 12342066 12344314 + TEC TEC MGP_BALBcJ_T0015577.1 MGP_BALBcJ_G0013674.1 mouse_genomes_project 6 125448220 125448753 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078486.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308105 83312479 - MGP_BALBcJ_P0078486 Pradc1 protein_coding protein_coding MGP_BALBcJ_T0078487.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308336 83312501 - Pradc1 protein_coding retained_intron MGP_BALBcJ_T0078488.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308337 83312548 - MGP_BALBcJ_P0078488 Pradc1 protein_coding protein_coding MGP_BALBcJ_T0078489.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308510 83313245 - Pradc1 protein_coding processed_transcript MGP_BALBcJ_T0078490.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308835 83312524 - Pradc1 protein_coding processed_transcript MGP_BALBcJ_T0078491.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308850 83312556 - Pradc1 protein_coding retained_intron MGP_BALBcJ_T0078492.1 MGP_BALBcJ_G0030933.1 mouse_genomes_project 6 83308982 83312513 - Pradc1 protein_coding processed_transcript MGP_BALBcJ_T0076516.1 MGP_BALBcJ_G0030472.1 mouse_genomes_project 6 20401543 20402980 - MGP_BALBcJ_P0076516 Rnf133 protein_coding protein_coding MGP_BALBcJ_T0076517.1 MGP_BALBcJ_G0030472.1 mouse_genomes_project 6 20401548 20402881 - MGP_BALBcJ_P0076517 Rnf133 protein_coding protein_coding MGP_BALBcJ_T0008676.1 MGP_BALBcJ_G0007008.1 mouse_genomes_project 6 103524186 103528030 - lincRNA lincRNA MGP_BALBcJ_T0015326.1 MGP_BALBcJ_G0013423.1 mouse_genomes_project 6 49325555 49325824 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077840.1 MGP_BALBcJ_G0030799.1 mouse_genomes_project 6 56323152 56412936 - MGP_BALBcJ_P0077840 Fam13a protein_coding protein_coding MGP_BALBcJ_T0077841.1 MGP_BALBcJ_G0030799.1 mouse_genomes_project 6 56326647 56412727 - MGP_BALBcJ_P0077841 Fam13a protein_coding protein_coding MGP_BALBcJ_T0077842.1 MGP_BALBcJ_G0030799.1 mouse_genomes_project 6 56364888 56412809 - Fam13a protein_coding processed_transcript MGP_BALBcJ_T0077843.1 MGP_BALBcJ_G0030799.1 mouse_genomes_project 6 56393830 56412891 - Fam13a protein_coding retained_intron MGP_BALBcJ_T0077844.1 MGP_BALBcJ_G0030799.1 mouse_genomes_project 6 56408521 56412830 - Fam13a protein_coding retained_intron MGP_BALBcJ_T0077163.1 MGP_BALBcJ_G0030603.1 mouse_genomes_project 6 37913253 37916749 - MGP_BALBcJ_P0077163 Gm4744 protein_coding protein_coding MGP_BALBcJ_T0079920.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120605763 120632311 - MGP_BALBcJ_P0079920 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079921.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120605770 120629992 - MGP_BALBcJ_P0079921 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079922.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120605772 120632238 - MGP_BALBcJ_P0079922 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079923.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120610967 120632254 - MGP_BALBcJ_P0079923 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079924.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120610993 120630223 - MGP_BALBcJ_P0079924 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079925.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120611175 120632196 - MGP_BALBcJ_P0079925 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079926.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120617182 120632237 - MGP_BALBcJ_P0079926 Apobec1 protein_coding protein_coding MGP_BALBcJ_T0079927.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120617915 120632231 - Apobec1 protein_coding retained_intron MGP_BALBcJ_T0079928.1 MGP_BALBcJ_G0031207.1 mouse_genomes_project 6 120626483 120630303 - Apobec1 protein_coding retained_intron MGP_BALBcJ_T0015204.1 MGP_BALBcJ_G0013301.1 mouse_genomes_project 6 1071543 1072150 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077577.1 MGP_BALBcJ_G0030723.1 mouse_genomes_project 6 49372325 49375686 + MGP_BALBcJ_P0077577 5730596B20Rik protein_coding protein_coding MGP_BALBcJ_T0079315.1 MGP_BALBcJ_G0031099.1 mouse_genomes_project 6 111389574 111400443 - MGP_BALBcJ_P0079315 Tada3 protein_coding protein_coding MGP_BALBcJ_T0079316.1 MGP_BALBcJ_G0031099.1 mouse_genomes_project 6 111389587 111400492 - MGP_BALBcJ_P0079316 Tada3 protein_coding protein_coding MGP_BALBcJ_T0079317.1 MGP_BALBcJ_G0031099.1 mouse_genomes_project 6 111389835 111394057 - Tada3 protein_coding retained_intron MGP_BALBcJ_T0079318.1 MGP_BALBcJ_G0031099.1 mouse_genomes_project 6 111397311 111400665 - Tada3 protein_coding retained_intron MGP_BALBcJ_T0079319.1 MGP_BALBcJ_G0031099.1 mouse_genomes_project 6 111397408 111400665 - Tada3 protein_coding retained_intron MGP_BALBcJ_T0079320.1 MGP_BALBcJ_G0031099.1 mouse_genomes_project 6 111398929 111400682 - MGP_BALBcJ_P0079320 Tada3 protein_coding protein_coding MGP_BALBcJ_T0079354.1 MGP_BALBcJ_G0031106.1 mouse_genomes_project 6 111494485 111506218 + MGP_BALBcJ_P0079354 Il17rc protein_coding protein_coding MGP_BALBcJ_T0079355.1 MGP_BALBcJ_G0031106.1 mouse_genomes_project 6 111495341 111499513 + MGP_BALBcJ_P0079355 Il17rc protein_coding protein_coding MGP_BALBcJ_T0079356.1 MGP_BALBcJ_G0031106.1 mouse_genomes_project 6 111495852 111506218 + MGP_BALBcJ_P0079356 Il17rc protein_coding protein_coding MGP_BALBcJ_T0079357.1 MGP_BALBcJ_G0031106.1 mouse_genomes_project 6 111497329 111499819 + MGP_BALBcJ_P0079357 Il17rc protein_coding protein_coding MGP_BALBcJ_T0079358.1 MGP_BALBcJ_G0031106.1 mouse_genomes_project 6 111499662 111502376 + Il17rc protein_coding retained_intron MGP_BALBcJ_T0080252.1 MGP_BALBcJ_G0031275.1 mouse_genomes_project 6 123446251 123465115 - MGP_BALBcJ_P0080252 Plekhg6 protein_coding protein_coding MGP_BALBcJ_T0077471.1 MGP_BALBcJ_G0030698.1 mouse_genomes_project 6 46108770 46112553 + MGP_BALBcJ_P0077471 Doxl2 protein_coding protein_coding MGP_BALBcJ_T0077472.1 MGP_BALBcJ_G0030698.1 mouse_genomes_project 6 46108881 46112554 + MGP_BALBcJ_P0077472 Doxl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077473.1 MGP_BALBcJ_G0030698.1 mouse_genomes_project 6 46111041 46112551 + Doxl2 protein_coding retained_intron MGP_BALBcJ_T0010727.1 MGP_BALBcJ_G0008852.1 mouse_genomes_project 6 12124822 12124933 + Gm25470 miRNA miRNA MGP_BALBcJ_T0100000.1 MGP_BALBcJ_G0038036.1 mouse_genomes_project 6 39314578 39314685 - Gm24611 snRNA snRNA MGP_BALBcJ_T0002179.1 MGP_BALBcJ_G0002091.1 mouse_genomes_project 6 146303302 146307191 - TEC TEC MGP_BALBcJ_T0015621.1 MGP_BALBcJ_G0013718.1 mouse_genomes_project 6 131451508 131451854 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077218.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258442 39286414 + MGP_BALBcJ_P0077218 Clcn1 protein_coding protein_coding MGP_BALBcJ_T0077219.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258524 39285936 + MGP_BALBcJ_P0077219 Clcn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077220.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258613 39285987 + MGP_BALBcJ_P0077220 Clcn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077221.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258613 39285936 + MGP_BALBcJ_P0077221 Clcn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077222.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258613 39285936 + MGP_BALBcJ_P0077222 Clcn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077223.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258613 39285936 + MGP_BALBcJ_P0077223 Clcn1 protein_coding protein_coding MGP_BALBcJ_T0077224.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39258623 39285715 + MGP_BALBcJ_P0077224 Clcn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077225.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39270657 39287514 + Clcn1 protein_coding processed_transcript MGP_BALBcJ_T0077226.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39281902 39284822 + MGP_BALBcJ_P0077226 Clcn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077227.1 MGP_BALBcJ_G0030629.1 mouse_genomes_project 6 39284249 39285102 + Clcn1 protein_coding retained_intron MGP_BALBcJ_T0080593.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133361109 133439183 - MGP_BALBcJ_P0080593 Dusp16 protein_coding protein_coding MGP_BALBcJ_T0080594.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133361114 133439333 - MGP_BALBcJ_P0080594 Dusp16 protein_coding protein_coding MGP_BALBcJ_T0080595.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133363474 133407042 - MGP_BALBcJ_P0080595 Dusp16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080596.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133364429 133371700 - Dusp16 protein_coding retained_intron MGP_BALBcJ_T0080597.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133364581 133389431 - Dusp16 protein_coding processed_transcript MGP_BALBcJ_T0080598.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133366236 133404810 - MGP_BALBcJ_P0080598 Dusp16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080599.1 MGP_BALBcJ_G0031389.1 mouse_genomes_project 6 133382929 133437970 - MGP_BALBcJ_P0080599 Dusp16 protein_coding protein_coding MGP_BALBcJ_T0015566.1 MGP_BALBcJ_G0013663.1 mouse_genomes_project 6 123212730 123218199 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077536.1 MGP_BALBcJ_G0030713.1 mouse_genomes_project 6 47806583 47810351 - MGP_BALBcJ_P0077536 Npvf protein_coding protein_coding MGP_BALBcJ_T0102641.1 MGP_BALBcJ_G0040457.1 mouse_genomes_project 6 88229153 88230096 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0076369.1 MGP_BALBcJ_G0030447.1 mouse_genomes_project 6 12431449 12512816 + MGP_BALBcJ_P0076369 Mdfic protein_coding protein_coding MGP_BALBcJ_T0076370.1 MGP_BALBcJ_G0030447.1 mouse_genomes_project 6 12431449 12512820 + MGP_BALBcJ_P0076370 Mdfic protein_coding protein_coding MGP_BALBcJ_T0076371.1 MGP_BALBcJ_G0030447.1 mouse_genomes_project 6 12431491 12481682 + MGP_BALBcJ_P0076371 Mdfic protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076372.1 MGP_BALBcJ_G0030447.1 mouse_genomes_project 6 12431509 12483751 + MGP_BALBcJ_P0076372 Mdfic protein_coding protein_coding MGP_BALBcJ_T0076373.1 MGP_BALBcJ_G0030447.1 mouse_genomes_project 6 12431875 12511459 + MGP_BALBcJ_P0076373 Mdfic protein_coding protein_coding MGP_BALBcJ_T0076374.1 MGP_BALBcJ_G0030447.1 mouse_genomes_project 6 12438311 12480796 + MGP_BALBcJ_P0076374 Mdfic protein_coding protein_coding MGP_BALBcJ_T0080449.1 MGP_BALBcJ_G0031323.1 mouse_genomes_project 6 127598067 127608285 - MGP_BALBcJ_P0080449 Clec12b protein_coding protein_coding MGP_BALBcJ_T0080450.1 MGP_BALBcJ_G0031323.1 mouse_genomes_project 6 127598339 127608656 - MGP_BALBcJ_P0080450 Clec12b protein_coding protein_coding MGP_BALBcJ_T0015387.1 MGP_BALBcJ_G0013484.1 mouse_genomes_project 6 64868641 64869062 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001913.1 MGP_BALBcJ_G0001826.1 mouse_genomes_project 6 3578285 3580661 - TEC TEC MGP_BALBcJ_T0002046.1 MGP_BALBcJ_G0001959.1 mouse_genomes_project 6 84580904 84583272 - TEC TEC MGP_BALBcJ_T0010787.1 MGP_BALBcJ_G0008912.1 mouse_genomes_project 6 117943129 117943213 - Mir706 miRNA miRNA MGP_BALBcJ_T0076834.1 MGP_BALBcJ_G0030532.1 mouse_genomes_project 6 28324234 28369040 - MGP_BALBcJ_P0076834 Podxl protein_coding protein_coding MGP_BALBcJ_T0076835.1 MGP_BALBcJ_G0030532.1 mouse_genomes_project 6 28327735 28329055 - Podxl protein_coding processed_transcript MGP_BALBcJ_T0004953.1 MGP_BALBcJ_G0004252.1 mouse_genomes_project 6 69867927 69870655 - 4933431G14Rik antisense antisense MGP_BALBcJ_T0004954.1 MGP_BALBcJ_G0004252.1 mouse_genomes_project 6 69867927 69870912 - 4933431G14Rik antisense antisense MGP_BALBcJ_T0001902.1 MGP_BALBcJ_G0001815.1 mouse_genomes_project 6 27362 29476 - TEC TEC MGP_BALBcJ_T0015594.1 MGP_BALBcJ_G0013691.1 mouse_genomes_project 6 128605283 128605395 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005063.1 MGP_BALBcJ_G0004323.1 mouse_genomes_project 6 124908728 124911532 + Gm42574 antisense antisense MGP_BALBcJ_T0008615.1 MGP_BALBcJ_G0006964.1 mouse_genomes_project 6 71328740 71350925 - Gm31747 lincRNA lincRNA MGP_BALBcJ_T0015209.1 MGP_BALBcJ_G0013306.1 mouse_genomes_project 6 3057788 3058013 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100038.1 MGP_BALBcJ_G0038074.1 mouse_genomes_project 6 128602549 128602624 + Gm24676 snRNA snRNA MGP_BALBcJ_T0101255.1 MGP_BALBcJ_G0039291.1 mouse_genomes_project 6 52208108 52208237 + Gm24230 snoRNA snoRNA MGP_BALBcJ_T0077497.1 MGP_BALBcJ_G0030705.1 mouse_genomes_project 6 46522166 46528919 + MGP_BALBcJ_P0077497 Fam221a protein_coding protein_coding MGP_BALBcJ_T0077498.1 MGP_BALBcJ_G0030705.1 mouse_genomes_project 6 46522179 46541659 + MGP_BALBcJ_P0077498 Fam221a protein_coding protein_coding MGP_BALBcJ_T0077499.1 MGP_BALBcJ_G0030705.1 mouse_genomes_project 6 46531554 46537937 + Fam221a protein_coding processed_transcript MGP_BALBcJ_T0077500.1 MGP_BALBcJ_G0030705.1 mouse_genomes_project 6 46537733 46542047 + Fam221a protein_coding retained_intron MGP_BALBcJ_T0077501.1 MGP_BALBcJ_G0030705.1 mouse_genomes_project 6 46540245 46541992 + Fam221a protein_coding retained_intron MGP_BALBcJ_T0080451.1 MGP_BALBcJ_G0031324.1 mouse_genomes_project 6 127620097 127627892 + MGP_BALBcJ_P0080451 Clec1b protein_coding protein_coding MGP_BALBcJ_T0080452.1 MGP_BALBcJ_G0031324.1 mouse_genomes_project 6 127620105 127627880 + MGP_BALBcJ_P0080452 Clec1b protein_coding protein_coding MGP_BALBcJ_T0080453.1 MGP_BALBcJ_G0031324.1 mouse_genomes_project 6 127626040 127631960 + Clec1b protein_coding retained_intron MGP_BALBcJ_T0015560.1 MGP_BALBcJ_G0013657.1 mouse_genomes_project 6 121265886 121266381 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011635.1 MGP_BALBcJ_G0009760.1 mouse_genomes_project 6 81412561 81412884 - Gm24990 misc_RNA misc_RNA MGP_BALBcJ_T0015347.1 MGP_BALBcJ_G0013444.1 mouse_genomes_project 6 58516449 58517335 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079125.1 MGP_BALBcJ_G0031062.1 mouse_genomes_project 6 97681346 97723012 - MGP_BALBcJ_P0079125 Eif4e3 protein_coding protein_coding MGP_BALBcJ_T0102640.1 MGP_BALBcJ_G0040456.1 mouse_genomes_project 6 88032526 88032698 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0079218.1 MGP_BALBcJ_G0031084.1 mouse_genomes_project 6 108659431 109589878 + MGP_BALBcJ_P0079218 Grm7 protein_coding protein_coding MGP_BALBcJ_T0079219.1 MGP_BALBcJ_G0031084.1 mouse_genomes_project 6 108659431 109519546 + MGP_BALBcJ_P0079219 Grm7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079220.1 MGP_BALBcJ_G0031084.1 mouse_genomes_project 6 108659432 109591041 + MGP_BALBcJ_P0079220 Grm7 protein_coding protein_coding MGP_BALBcJ_T0079221.1 MGP_BALBcJ_G0031084.1 mouse_genomes_project 6 109518170 109522394 + MGP_BALBcJ_P0079221 Grm7 protein_coding protein_coding MGP_BALBcJ_T0079222.1 MGP_BALBcJ_G0031084.1 mouse_genomes_project 6 109518199 109524745 + MGP_BALBcJ_P0079222 Grm7 protein_coding protein_coding MGP_BALBcJ_T0101254.1 MGP_BALBcJ_G0039290.1 mouse_genomes_project 6 51080550 51080682 - Gm22910 snoRNA snoRNA MGP_BALBcJ_T0005002.1 MGP_BALBcJ_G0004278.1 mouse_genomes_project 6 86154501 86157578 - 1700031F10Rik antisense antisense MGP_BALBcJ_T0005003.1 MGP_BALBcJ_G0004278.1 mouse_genomes_project 6 86154503 86155539 - 1700031F10Rik antisense antisense MGP_BALBcJ_T0078164.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 74684494 75793266 - MGP_BALBcJ_P0078164 Ctnna2 protein_coding protein_coding MGP_BALBcJ_T0078165.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 74684494 75793266 - MGP_BALBcJ_P0078165 Ctnna2 protein_coding protein_coding MGP_BALBcJ_T0078166.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 74684497 75793117 - MGP_BALBcJ_P0078166 Ctnna2 protein_coding protein_coding MGP_BALBcJ_T0078167.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 74685407 75793127 - MGP_BALBcJ_P0078167 Ctnna2 protein_coding protein_coding MGP_BALBcJ_T0078168.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 74685613 74707089 - Ctnna2 protein_coding retained_intron MGP_BALBcJ_T0078169.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 74719584 74950513 - MGP_BALBcJ_P0078169 Ctnna2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078174.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 75412128 75793127 - MGP_BALBcJ_P0078174 Ctnna2 protein_coding protein_coding MGP_BALBcJ_T0078175.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 75417722 75717823 - MGP_BALBcJ_P0078175 Ctnna2 protein_coding unknown_likely_coding MGP_BALBcJ_T0078176.1 MGP_BALBcJ_G0030870.1 mouse_genomes_project 6 75737017 75793152 - Ctnna2 protein_coding processed_transcript MGP_BALBcJ_T0002712.1 MGP_BALBcJ_G0002588.1 mouse_genomes_project 6 38073264 38073524 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0102644.1 MGP_BALBcJ_G0040460.1 mouse_genomes_project 6 122106874 122107778 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008771.1 MGP_BALBcJ_G0007082.1 mouse_genomes_project 6 148338694 148339567 + Gm21814 lincRNA lincRNA MGP_BALBcJ_T0008772.1 MGP_BALBcJ_G0007082.1 mouse_genomes_project 6 148338736 148360391 + Gm21814 lincRNA lincRNA MGP_BALBcJ_T0008773.1 MGP_BALBcJ_G0007082.1 mouse_genomes_project 6 148358907 148360556 + Gm21814 lincRNA lincRNA MGP_BALBcJ_T0002001.1 MGP_BALBcJ_G0001914.1 mouse_genomes_project 6 69285571 69288794 - TEC TEC MGP_BALBcJ_T0010761.1 MGP_BALBcJ_G0008886.1 mouse_genomes_project 6 79702810 79702888 - Mir468 miRNA miRNA MGP_BALBcJ_T0076434.1 MGP_BALBcJ_G0030456.1 mouse_genomes_project 6 14801927 14857886 - MGP_BALBcJ_P0076434 Asz1 protein_coding protein_coding MGP_BALBcJ_T0076435.1 MGP_BALBcJ_G0030456.1 mouse_genomes_project 6 14801946 14857873 - Asz1 protein_coding retained_intron MGP_BALBcJ_T0076436.1 MGP_BALBcJ_G0030456.1 mouse_genomes_project 6 14820095 14821399 - Asz1 protein_coding retained_intron MGP_BALBcJ_T0076437.1 MGP_BALBcJ_G0030456.1 mouse_genomes_project 6 14822067 14857874 - MGP_BALBcJ_P0076437 Asz1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076438.1 MGP_BALBcJ_G0030456.1 mouse_genomes_project 6 14823354 14857890 - Asz1 protein_coding processed_transcript MGP_BALBcJ_T0001933.1 MGP_BALBcJ_G0001846.1 mouse_genomes_project 6 25011897 25015829 - TEC TEC MGP_BALBcJ_T0080239.1 MGP_BALBcJ_G0031272.1 mouse_genomes_project 6 123389813 123397328 - MGP_BALBcJ_P0080239 Ltbr protein_coding protein_coding MGP_BALBcJ_T0080240.1 MGP_BALBcJ_G0031272.1 mouse_genomes_project 6 123392546 123393000 - Ltbr protein_coding retained_intron MGP_BALBcJ_T0080241.1 MGP_BALBcJ_G0031272.1 mouse_genomes_project 6 123396175 123396708 - Ltbr protein_coding retained_intron MGP_BALBcJ_T0078016.1 MGP_BALBcJ_G0030844.1 mouse_genomes_project 6 69562351 69573195 - MGP_BALBcJ_P0078016 Mrpl35 protein_coding protein_coding MGP_BALBcJ_T0078017.1 MGP_BALBcJ_G0030844.1 mouse_genomes_project 6 69565547 69573148 - MGP_BALBcJ_P0078017 Mrpl35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078018.1 MGP_BALBcJ_G0030844.1 mouse_genomes_project 6 69567053 69576354 - Mrpl35 protein_coding processed_transcript MGP_BALBcJ_T0015634.1 MGP_BALBcJ_G0013731.1 mouse_genomes_project 6 138837365 138838555 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078535.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83823837 83844602 - MGP_BALBcJ_P0078535 Dusp11 protein_coding protein_coding MGP_BALBcJ_T0078536.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83829312 83841507 - MGP_BALBcJ_P0078536 Dusp11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078537.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83831353 83832527 - Dusp11 protein_coding retained_intron MGP_BALBcJ_T0078538.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83831358 83835586 - Dusp11 protein_coding processed_transcript MGP_BALBcJ_T0078539.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83831681 83835470 - Dusp11 protein_coding retained_intron MGP_BALBcJ_T0078540.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83836605 83844602 - Dusp11 protein_coding processed_transcript MGP_BALBcJ_T0078541.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83836707 83844542 - Dusp11 protein_coding processed_transcript MGP_BALBcJ_T0078542.1 MGP_BALBcJ_G0030947.1 mouse_genomes_project 6 83843257 83844577 - Dusp11 protein_coding retained_intron MGP_BALBcJ_T0079616.1 MGP_BALBcJ_G0031156.1 mouse_genomes_project 6 114606927 114628859 - MGP_BALBcJ_P0079616 protein_coding unknown_likely_coding MGP_BALBcJ_T0079617.1 MGP_BALBcJ_G0031156.1 mouse_genomes_project 6 114607150 114629011 - MGP_BALBcJ_P0079617 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076344.1 MGP_BALBcJ_G0030444.1 mouse_genomes_project 6 10524647 10528431 - MGP_BALBcJ_P0076344 2610001J05Rik protein_coding protein_coding MGP_BALBcJ_T0076345.1 MGP_BALBcJ_G0030444.1 mouse_genomes_project 6 10526712 10528379 - MGP_BALBcJ_P0076345 2610001J05Rik protein_coding protein_coding MGP_BALBcJ_T0076346.1 MGP_BALBcJ_G0030444.1 mouse_genomes_project 6 10526772 10528378 - MGP_BALBcJ_P0076346 2610001J05Rik protein_coding protein_coding MGP_BALBcJ_T0076347.1 MGP_BALBcJ_G0030444.1 mouse_genomes_project 6 10526913 10528378 - MGP_BALBcJ_P0076347 2610001J05Rik protein_coding protein_coding MGP_BALBcJ_T0015271.1 MGP_BALBcJ_G0013368.1 mouse_genomes_project 6 33454243 33454448 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011623.1 MGP_BALBcJ_G0009748.1 mouse_genomes_project 6 49356993 49357136 + Gm27477 misc_RNA misc_RNA MGP_BALBcJ_T0008498.1 MGP_BALBcJ_G0006879.1 mouse_genomes_project 6 14091597 14092205 + Gm29591 lincRNA lincRNA MGP_BALBcJ_T0077900.1 MGP_BALBcJ_G0030811.1 mouse_genomes_project 6 63137415 63178058 + MGP_BALBcJ_P0077900 Ndnf protein_coding protein_coding MGP_BALBcJ_T0077901.1 MGP_BALBcJ_G0030811.1 mouse_genomes_project 6 63167161 63169172 + Ndnf protein_coding retained_intron MGP_BALBcJ_T0015294.1 MGP_BALBcJ_G0013391.1 mouse_genomes_project 6 40917781 40920411 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098771.1 MGP_BALBcJ_G0036825.1 mouse_genomes_project 6 50216956 50217095 - Gm26215 scaRNA scaRNA MGP_BALBcJ_T0018277.1 MGP_BALBcJ_G0015588.1 mouse_genomes_project 6 123571015 123586310 + Gm26728 processed_transcript antisense MGP_BALBcJ_T0018278.1 MGP_BALBcJ_G0015588.1 mouse_genomes_project 6 123571019 123572554 + Gm26728 processed_transcript retained_intron MGP_BALBcJ_T0018279.1 MGP_BALBcJ_G0015588.1 mouse_genomes_project 6 123571021 123576265 + Gm26728 processed_transcript antisense MGP_BALBcJ_T0008677.1 MGP_BALBcJ_G0007009.1 mouse_genomes_project 6 103704052 103708592 - Gm15631 lincRNA lincRNA MGP_BALBcJ_T0077755.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54123902 54165677 - MGP_BALBcJ_P0077755 Nt5c3 protein_coding protein_coding MGP_BALBcJ_T0077756.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54123902 54143645 - MGP_BALBcJ_P0077756 Nt5c3 protein_coding protein_coding MGP_BALBcJ_T0077757.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54124453 54165564 - MGP_BALBcJ_P0077757 Nt5c3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077758.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54124486 54165621 - MGP_BALBcJ_P0077758 Nt5c3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077759.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54126293 54165469 - MGP_BALBcJ_P0077759 Nt5c3 protein_coding protein_coding MGP_BALBcJ_T0077760.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54128167 54131366 - Nt5c3 protein_coding retained_intron MGP_BALBcJ_T0077761.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54133313 54165635 - Nt5c3 protein_coding processed_transcript MGP_BALBcJ_T0077762.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54134575 54165602 - Nt5c3 protein_coding processed_transcript MGP_BALBcJ_T0077763.1 MGP_BALBcJ_G0030764.1 mouse_genomes_project 6 54137568 54143642 - Nt5c3 protein_coding retained_intron MGP_BALBcJ_T0015471.1 MGP_BALBcJ_G0013568.1 mouse_genomes_project 6 92542403 92542622 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015327.1 MGP_BALBcJ_G0013424.1 mouse_genomes_project 6 49557199 49557480 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078147.1 MGP_BALBcJ_G0030866.1 mouse_genomes_project 6 70718049 70719198 - MGP_BALBcJ_P0078147 protein_coding protein_coding MGP_BALBcJ_T0078148.1 MGP_BALBcJ_G0030866.1 mouse_genomes_project 6 70718055 70719012 - MGP_BALBcJ_P0078148 protein_coding protein_coding MGP_BALBcJ_T0078149.1 MGP_BALBcJ_G0030866.1 mouse_genomes_project 6 70718063 70719457 - MGP_BALBcJ_P0078149 protein_coding protein_coding MGP_BALBcJ_T0078150.1 MGP_BALBcJ_G0030866.1 mouse_genomes_project 6 70718357 70719109 - MGP_BALBcJ_P0078150 protein_coding protein_coding MGP_BALBcJ_T0081133.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147678360 147704023 - MGP_BALBcJ_P0081133 Fam60a protein_coding protein_coding MGP_BALBcJ_T0081134.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147679932 147702371 - MGP_BALBcJ_P0081134 Fam60a protein_coding protein_coding MGP_BALBcJ_T0081135.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147680223 147703966 - MGP_BALBcJ_P0081135 Fam60a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081136.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147683499 147703711 - MGP_BALBcJ_P0081136 Fam60a protein_coding protein_coding MGP_BALBcJ_T0081137.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147683617 147702282 - MGP_BALBcJ_P0081137 Fam60a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081138.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147685976 147703912 - MGP_BALBcJ_P0081138 Fam60a protein_coding protein_coding MGP_BALBcJ_T0081139.1 MGP_BALBcJ_G0031489.1 mouse_genomes_project 6 147701948 147703999 - Fam60a protein_coding processed_transcript MGP_BALBcJ_T0076770.1 MGP_BALBcJ_G0030521.1 mouse_genomes_project 6 27328572 27338967 + MGP_BALBcJ_P0076770 Ssmem1 protein_coding protein_coding MGP_BALBcJ_T0076771.1 MGP_BALBcJ_G0030521.1 mouse_genomes_project 6 27331009 27338968 + MGP_BALBcJ_P0076771 Ssmem1 protein_coding protein_coding MGP_BALBcJ_T0076772.1 MGP_BALBcJ_G0030521.1 mouse_genomes_project 6 27332421 27338258 + MGP_BALBcJ_P0076772 Ssmem1 protein_coding protein_coding MGP_BALBcJ_T0098772.1 MGP_BALBcJ_G0036826.1 mouse_genomes_project 6 123200621 123200757 + Gm23751 scaRNA scaRNA MGP_BALBcJ_T0100034.1 MGP_BALBcJ_G0038070.1 mouse_genomes_project 6 123050716 123050819 + Gm23851 snRNA snRNA MGP_BALBcJ_T0015238.1 MGP_BALBcJ_G0013335.1 mouse_genomes_project 6 14453942 14455198 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078555.1 MGP_BALBcJ_G0030950.1 mouse_genomes_project 6 84093598 84174084 + MGP_BALBcJ_P0078555 Tgfa protein_coding protein_coding MGP_BALBcJ_T0078556.1 MGP_BALBcJ_G0030950.1 mouse_genomes_project 6 84093626 84108268 + Tgfa protein_coding processed_transcript MGP_BALBcJ_T0078557.1 MGP_BALBcJ_G0030950.1 mouse_genomes_project 6 84093765 84170394 + MGP_BALBcJ_P0078557 Tgfa protein_coding protein_coding MGP_BALBcJ_T0078558.1 MGP_BALBcJ_G0030950.1 mouse_genomes_project 6 84109949 84170584 + Tgfa protein_coding processed_transcript MGP_BALBcJ_T0076836.1 MGP_BALBcJ_G0030533.1 mouse_genomes_project 6 28860765 28869626 + 1700012A03Rik protein_coding processed_transcript MGP_BALBcJ_T0076837.1 MGP_BALBcJ_G0030533.1 mouse_genomes_project 6 28860787 28869626 + 1700012A03Rik protein_coding processed_transcript MGP_BALBcJ_T0076838.1 MGP_BALBcJ_G0030533.1 mouse_genomes_project 6 28860804 28869620 + MGP_BALBcJ_P0076838 1700012A03Rik protein_coding protein_coding MGP_BALBcJ_T0076839.1 MGP_BALBcJ_G0030533.1 mouse_genomes_project 6 28868845 28869326 + 1700012A03Rik protein_coding processed_transcript MGP_BALBcJ_T0015619.1 MGP_BALBcJ_G0013716.1 mouse_genomes_project 6 131321979 131322338 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015655.1 MGP_BALBcJ_G0013752.1 mouse_genomes_project 6 147657774 147657945 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005020.1 MGP_BALBcJ_G0004289.1 mouse_genomes_project 6 93171342 93174972 - Kbtbd8os antisense antisense MGP_BALBcJ_T0001931.1 MGP_BALBcJ_G0001844.1 mouse_genomes_project 6 24989813 24993611 - TEC TEC MGP_BALBcJ_T0002000.1 MGP_BALBcJ_G0001913.1 mouse_genomes_project 6 69209615 69212393 - TEC TEC MGP_BALBcJ_T0078074.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70110885 70113288 - Rnf181 protein_coding retained_intron MGP_BALBcJ_T0078075.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70110885 70113558 - MGP_BALBcJ_P0078075 Rnf181 protein_coding protein_coding MGP_BALBcJ_T0078076.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70110885 70113597 - MGP_BALBcJ_P0078076 Rnf181 protein_coding protein_coding MGP_BALBcJ_T0078077.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111043 70113525 - MGP_BALBcJ_P0078077 Rnf181 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078078.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111255 70112561 - MGP_BALBcJ_P0078078 Rnf181 protein_coding protein_coding MGP_BALBcJ_T0078079.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111416 70118121 - MGP_BALBcJ_P0078079 Rnf181 protein_coding protein_coding MGP_BALBcJ_T0078080.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111422 70113509 - MGP_BALBcJ_P0078080 Rnf181 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078081.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111448 70113555 - MGP_BALBcJ_P0078081 Rnf181 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078082.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111449 70113528 - MGP_BALBcJ_P0078082 Rnf181 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078083.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111459 70113547 - MGP_BALBcJ_P0078083 Rnf181 protein_coding protein_coding MGP_BALBcJ_T0078084.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111507 70113530 - MGP_BALBcJ_P0078084 Rnf181 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078085.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111589 70112232 - Rnf181 protein_coding retained_intron MGP_BALBcJ_T0078086.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70111784 70113593 - Rnf181 protein_coding retained_intron MGP_BALBcJ_T0078087.1 MGP_BALBcJ_G0030854.1 mouse_genomes_project 6 70112184 70113160 - Rnf181 protein_coding retained_intron MGP_BALBcJ_T0098996.1 MGP_BALBcJ_G0037039.1 mouse_genomes_project 6 86285716 86286181 - Gm44265 sense_intronic sense_intronic MGP_BALBcJ_T0079028.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92665011 92764705 - MGP_BALBcJ_P0079028 Lrig1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079029.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92665016 92764692 - MGP_BALBcJ_P0079029 Lrig1 protein_coding protein_coding MGP_BALBcJ_T0079030.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92665018 92764684 - MGP_BALBcJ_P0079030 Lrig1 protein_coding protein_coding MGP_BALBcJ_T0079031.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92665161 92665875 - Lrig1 protein_coding processed_transcript MGP_BALBcJ_T0079032.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92685479 92745185 - Lrig1 protein_coding processed_transcript MGP_BALBcJ_T0079033.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92686895 92718702 - Lrig1 protein_coding processed_transcript MGP_BALBcJ_T0079034.1 MGP_BALBcJ_G0031045.1 mouse_genomes_project 6 92688520 92743421 - Lrig1 protein_coding processed_transcript MGP_BALBcJ_T0008685.1 MGP_BALBcJ_G0007017.1 mouse_genomes_project 6 113431956 113439455 - Gm44082 lincRNA lincRNA MGP_BALBcJ_T0077345.1 MGP_BALBcJ_G0030670.1 mouse_genomes_project 6 45058143 45070675 + MGP_BALBcJ_P0077345 Zfp956 protein_coding protein_coding MGP_BALBcJ_T0077346.1 MGP_BALBcJ_G0030670.1 mouse_genomes_project 6 45058198 45061344 + Zfp956 protein_coding retained_intron MGP_BALBcJ_T0077347.1 MGP_BALBcJ_G0030670.1 mouse_genomes_project 6 45058200 45070672 + MGP_BALBcJ_P0077347 Zfp956 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078737.1 MGP_BALBcJ_G0030985.1 mouse_genomes_project 6 86015415 86036341 + MGP_BALBcJ_P0078737 Rpn1 protein_coding protein_coding MGP_BALBcJ_T0078738.1 MGP_BALBcJ_G0030985.1 mouse_genomes_project 6 86015496 86026700 + MGP_BALBcJ_P0078738 Rpn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078739.1 MGP_BALBcJ_G0030985.1 mouse_genomes_project 6 86024954 86032142 + Rpn1 protein_coding retained_intron MGP_BALBcJ_T0078740.1 MGP_BALBcJ_G0030985.1 mouse_genomes_project 6 86030323 86032399 + Rpn1 protein_coding retained_intron MGP_BALBcJ_T0078741.1 MGP_BALBcJ_G0030985.1 mouse_genomes_project 6 86032607 86034424 + Rpn1 protein_coding retained_intron MGP_BALBcJ_T0010802.1 MGP_BALBcJ_G0008927.1 mouse_genomes_project 6 135538593 135538734 - Gm44364 miRNA miRNA MGP_BALBcJ_T0002052.1 MGP_BALBcJ_G0001965.1 mouse_genomes_project 6 85174219 85177584 - TEC TEC MGP_BALBcJ_T0080196.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123226906 123243525 + Iffo1 protein_coding retained_intron MGP_BALBcJ_T0080197.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123226906 123243525 + MGP_BALBcJ_P0080197 Iffo1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080198.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123226906 123243525 + MGP_BALBcJ_P0080198 Iffo1 protein_coding protein_coding MGP_BALBcJ_T0080199.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123226916 123243519 + MGP_BALBcJ_P0080199 Iffo1 protein_coding protein_coding MGP_BALBcJ_T0080200.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123226931 123243519 + Iffo1 protein_coding retained_intron MGP_BALBcJ_T0080201.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123227466 123243519 + MGP_BALBcJ_P0080201 Iffo1 protein_coding protein_coding MGP_BALBcJ_T0080202.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123227691 123243519 + Iffo1 protein_coding retained_intron MGP_BALBcJ_T0080203.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123230675 123233171 + Iffo1 protein_coding processed_transcript MGP_BALBcJ_T0080204.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123231196 123234414 + Iffo1 protein_coding retained_intron MGP_BALBcJ_T0080205.1 MGP_BALBcJ_G0031265.1 mouse_genomes_project 6 123235031 123242800 + Iffo1 protein_coding retained_intron MGP_BALBcJ_T0005104.1 MGP_BALBcJ_G0004358.1 mouse_genomes_project 6 144750313 144756188 - Sspnos antisense antisense MGP_BALBcJ_T0015603.1 MGP_BALBcJ_G0013700.1 mouse_genomes_project 6 129466242 129467979 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079068.1 MGP_BALBcJ_G0031056.1 mouse_genomes_project 6 95285370 95300305 - MGP_BALBcJ_P0079068 Lmod3 protein_coding protein_coding MGP_BALBcJ_T0080253.1 MGP_BALBcJ_G0031276.1 mouse_genomes_project 6 123535098 123571383 - MGP_BALBcJ_P0080253 Cd9 protein_coding protein_coding MGP_BALBcJ_T0080254.1 MGP_BALBcJ_G0031276.1 mouse_genomes_project 6 123535421 123553983 - Cd9 protein_coding processed_transcript MGP_BALBcJ_T0080255.1 MGP_BALBcJ_G0031276.1 mouse_genomes_project 6 123536948 123538647 - Cd9 protein_coding retained_intron MGP_BALBcJ_T0077919.1 MGP_BALBcJ_G0030820.1 mouse_genomes_project 6 64092887 64093897 - MGP_BALBcJ_P0077919 protein_coding protein_coding MGP_BALBcJ_T0002081.1 MGP_BALBcJ_G0001994.1 mouse_genomes_project 6 89900480 89901532 - TEC TEC MGP_BALBcJ_T0015249.1 MGP_BALBcJ_G0013346.1 mouse_genomes_project 6 18236996 18237216 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077438.1 MGP_BALBcJ_G0030691.1 mouse_genomes_project 6 45862580 45867455 + MGP_BALBcJ_P0077438 Gimap1 protein_coding protein_coding MGP_BALBcJ_T0077440.1 MGP_BALBcJ_G0030691.1 mouse_genomes_project 6 45862599 45866241 + MGP_BALBcJ_P0077440 Gimap1 protein_coding protein_coding MGP_BALBcJ_T0077441.1 MGP_BALBcJ_G0030691.1 mouse_genomes_project 6 45862602 45867459 + MGP_BALBcJ_P0077441 Gimap1 protein_coding protein_coding MGP_BALBcJ_T0077442.1 MGP_BALBcJ_G0030691.1 mouse_genomes_project 6 45862613 45863553 + Gimap1 protein_coding retained_intron MGP_BALBcJ_T0077443.1 MGP_BALBcJ_G0030691.1 mouse_genomes_project 6 45862633 45865314 + Gimap1 protein_coding retained_intron MGP_BALBcJ_T0077444.1 MGP_BALBcJ_G0030691.1 mouse_genomes_project 6 45865699 45867460 + Gimap1 protein_coding retained_intron MGP_BALBcJ_T0101736.1 MGP_BALBcJ_G0039705.1 mouse_genomes_project 6 31299778 31317407 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101737.1 MGP_BALBcJ_G0039705.1 mouse_genomes_project 6 31299939 31314774 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101738.1 MGP_BALBcJ_G0039705.1 mouse_genomes_project 6 31314742 31314915 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101739.1 MGP_BALBcJ_G0039705.1 mouse_genomes_project 6 31315182 31317408 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0008515.1 MGP_BALBcJ_G0006892.1 mouse_genomes_project 6 27905204 27907010 + Gm13833 lincRNA lincRNA MGP_BALBcJ_T0015407.1 MGP_BALBcJ_G0013504.1 mouse_genomes_project 6 68153780 68155677 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018233.1 MGP_BALBcJ_G0015572.1 mouse_genomes_project 6 51480927 51643249 - 9130019P16Rik processed_transcript antisense MGP_BALBcJ_T0018234.1 MGP_BALBcJ_G0015572.1 mouse_genomes_project 6 51514240 51540761 - 9130019P16Rik processed_transcript lincRNA MGP_BALBcJ_T0018235.1 MGP_BALBcJ_G0015572.1 mouse_genomes_project 6 51637625 51642583 - 9130019P16Rik processed_transcript lincRNA MGP_BALBcJ_T0077150.1 MGP_BALBcJ_G0030598.1 mouse_genomes_project 6 37572809 37573805 - MGP_BALBcJ_P0077150 Tas2r138 protein_coding protein_coding MGP_BALBcJ_T0102619.1 MGP_BALBcJ_G0040435.1 mouse_genomes_project 6 55418729 55418834 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015270.1 MGP_BALBcJ_G0013367.1 mouse_genomes_project 6 31692873 31693569 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002650.1 MGP_BALBcJ_G0002536.1 mouse_genomes_project 6 38025519 38026012 + MGP_BALBcJ_P0002650 Trbv4 TR_V_gene TR_V_gene MGP_BALBcJ_T0080666.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135222546 135285958 + MGP_BALBcJ_P0080666 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080667.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135236905 135330377 + MGP_BALBcJ_P0080667 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080668.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135236909 135282974 + MGP_BALBcJ_P0080668 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080669.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135236944 135300933 + MGP_BALBcJ_P0080669 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080670.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135236949 135242497 + Atf7ip protein_coding retained_intron MGP_BALBcJ_T0080671.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135251215 135305179 + MGP_BALBcJ_P0080671 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080672.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135270385 135279116 + MGP_BALBcJ_P0080672 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080673.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135273213 135279299 + MGP_BALBcJ_P0080673 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080674.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135273231 135274427 + Atf7ip protein_coding retained_intron MGP_BALBcJ_T0080675.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135280048 135290523 + MGP_BALBcJ_P0080675 Atf7ip protein_coding protein_coding MGP_BALBcJ_T0080676.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135295630 135300880 + Atf7ip protein_coding retained_intron MGP_BALBcJ_T0080677.1 MGP_BALBcJ_G0031405.1 mouse_genomes_project 6 135313034 135327824 + Atf7ip protein_coding retained_intron MGP_BALBcJ_T0015365.1 MGP_BALBcJ_G0013462.1 mouse_genomes_project 6 62730518 62730852 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098628.1 MGP_BALBcJ_G0036682.1 mouse_genomes_project 6 57724389 57724508 + n-R5s162 rRNA rRNA MGP_BALBcJ_T0076273.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4977571 5177659 + MGP_BALBcJ_P0076273 Umad1 protein_coding protein_coding MGP_BALBcJ_T0076274.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4977633 5145443 + MGP_BALBcJ_P0076274 Umad1 protein_coding protein_coding MGP_BALBcJ_T0076275.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4977665 5147069 + MGP_BALBcJ_P0076275 Umad1 protein_coding protein_coding MGP_BALBcJ_T0076276.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4977711 5145584 + MGP_BALBcJ_P0076276 Umad1 protein_coding protein_coding MGP_BALBcJ_T0076277.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4977713 5147065 + MGP_BALBcJ_P0076277 Umad1 protein_coding protein_coding MGP_BALBcJ_T0076278.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4977727 4997730 + Umad1 protein_coding processed_transcript MGP_BALBcJ_T0076280.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 4989254 5147072 + MGP_BALBcJ_P0076280 Umad1 protein_coding protein_coding MGP_BALBcJ_T0076281.1 MGP_BALBcJ_G0030431.1 mouse_genomes_project 6 5137982 5146543 + Umad1 protein_coding processed_transcript MGP_BALBcJ_T0077814.1 MGP_BALBcJ_G0030795.1 mouse_genomes_project 6 55603699 55604784 + MGP_BALBcJ_P0077814 Vmn1r28 protein_coding protein_coding MGP_BALBcJ_T0002659.1 MGP_BALBcJ_G0002544.1 mouse_genomes_project 6 38108537 38109008 + MGP_BALBcJ_P0002659 Trbv15 TR_V_gene TR_V_gene MGP_BALBcJ_T0077812.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 55503934 56063028 + MGP_BALBcJ_P0077812 Abcg2 protein_coding protein_coding MGP_BALBcJ_T0077813.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 55503938 55949631 + Abcg2 protein_coding processed_transcript MGP_BALBcJ_T0077817.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 55990927 56094813 + MGP_BALBcJ_P0077817 Abcg2 protein_coding protein_coding MGP_BALBcJ_T0077818.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56035838 56063275 + Abcg2 protein_coding retained_intron MGP_BALBcJ_T0077819.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56035852 56063736 + MGP_BALBcJ_P0077819 Abcg2 protein_coding protein_coding MGP_BALBcJ_T0077820.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56035852 56091605 + MGP_BALBcJ_P0077820 Abcg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077821.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56035856 56091247 + MGP_BALBcJ_P0077821 Abcg2 protein_coding protein_coding MGP_BALBcJ_T0077822.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56035856 56089292 + MGP_BALBcJ_P0077822 Abcg2 protein_coding protein_coding MGP_BALBcJ_T0077823.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56035874 56063736 + MGP_BALBcJ_P0077823 Abcg2 protein_coding protein_coding MGP_BALBcJ_T0077824.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56061906 56063244 + Abcg2 protein_coding retained_intron MGP_BALBcJ_T0077825.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56072808 56091111 + MGP_BALBcJ_P0077825 Abcg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077826.1 MGP_BALBcJ_G0030794.1 mouse_genomes_project 6 56076708 56083470 + Abcg2 protein_coding retained_intron MGP_BALBcJ_T0101242.1 MGP_BALBcJ_G0039278.1 mouse_genomes_project 6 21947792 21947915 - Gm22529 snoRNA snoRNA MGP_BALBcJ_T0011626.1 MGP_BALBcJ_G0009751.1 mouse_genomes_project 6 49443180 49443271 + Gm27695 misc_RNA misc_RNA MGP_BALBcJ_T0078948.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89683035 89734298 + Slc6a6 protein_coding processed_transcript MGP_BALBcJ_T0078949.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89683059 89758173 + MGP_BALBcJ_P0078949 Slc6a6 protein_coding protein_coding MGP_BALBcJ_T0078950.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89683061 89726062 + Slc6a6 protein_coding retained_intron MGP_BALBcJ_T0078951.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89683086 89724073 + MGP_BALBcJ_P0078951 Slc6a6 protein_coding protein_coding MGP_BALBcJ_T0078952.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89683094 89724108 + MGP_BALBcJ_P0078952 Slc6a6 protein_coding protein_coding MGP_BALBcJ_T0078953.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89683115 89698225 + Slc6a6 protein_coding retained_intron MGP_BALBcJ_T0078954.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89700572 89723994 + MGP_BALBcJ_P0078954 Slc6a6 protein_coding protein_coding MGP_BALBcJ_T0078955.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89724089 89744146 + MGP_BALBcJ_P0078955 Slc6a6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078956.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89738766 89740212 + Slc6a6 protein_coding retained_intron MGP_BALBcJ_T0078957.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89747472 89749277 + Slc6a6 protein_coding retained_intron MGP_BALBcJ_T0078958.1 MGP_BALBcJ_G0031030.1 mouse_genomes_project 6 89749290 89751885 + Slc6a6 protein_coding retained_intron MGP_BALBcJ_T0015592.1 MGP_BALBcJ_G0013689.1 mouse_genomes_project 6 127770718 127771160 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101955.1 MGP_BALBcJ_G0039814.1 mouse_genomes_project 6 128480755 128488744 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0100003.1 MGP_BALBcJ_G0038039.1 mouse_genomes_project 6 45397247 45397447 + Gm22122 snRNA snRNA MGP_BALBcJ_T0002715.1 MGP_BALBcJ_G0002591.1 mouse_genomes_project 6 38182870 38183161 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0018237.1 MGP_BALBcJ_G0015574.1 mouse_genomes_project 6 57747305 57873627 - processed_transcript lincRNA MGP_BALBcJ_T0018238.1 MGP_BALBcJ_G0015574.1 mouse_genomes_project 6 57866035 57873618 - processed_transcript lincRNA MGP_BALBcJ_T0018239.1 MGP_BALBcJ_G0015574.1 mouse_genomes_project 6 57866851 57873591 - processed_transcript lincRNA MGP_BALBcJ_T0018240.1 MGP_BALBcJ_G0015574.1 mouse_genomes_project 6 57866867 57873600 - processed_transcript lincRNA MGP_BALBcJ_T0018241.1 MGP_BALBcJ_G0015574.1 mouse_genomes_project 6 57870937 57873627 - processed_transcript retained_intron MGP_BALBcJ_T0077771.1 MGP_BALBcJ_G0030770.1 mouse_genomes_project 6 54305250 54402132 + MGP_BALBcJ_P0077771 protein_coding protein_coding MGP_BALBcJ_T0079530.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113833453 113841742 + MGP_BALBcJ_P0079530 Rho protein_coding protein_coding MGP_BALBcJ_T0079531.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113833630 113835804 + Rho protein_coding retained_intron MGP_BALBcJ_T0079532.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113834261 113838413 + MGP_BALBcJ_P0079532 Rho protein_coding protein_coding MGP_BALBcJ_T0079533.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113836046 113838658 + MGP_BALBcJ_P0079533 Rho protein_coding protein_coding MGP_BALBcJ_T0079534.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113836077 113838778 + MGP_BALBcJ_P0079534 Rho protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079535.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113836443 113837750 + Rho protein_coding retained_intron MGP_BALBcJ_T0079536.1 MGP_BALBcJ_G0031139.1 mouse_genomes_project 6 113836902 113837934 + Rho protein_coding retained_intron MGP_BALBcJ_T0002013.1 MGP_BALBcJ_G0001926.1 mouse_genomes_project 6 70981582 70984727 + TEC TEC MGP_BALBcJ_T0102626.1 MGP_BALBcJ_G0040442.1 mouse_genomes_project 6 58540130 58540395 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0079618.1 MGP_BALBcJ_G0031157.1 mouse_genomes_project 6 115059790 115066316 + MGP_BALBcJ_P0079618 Cxcl12 protein_coding protein_coding MGP_BALBcJ_T0079619.1 MGP_BALBcJ_G0031157.1 mouse_genomes_project 6 115059829 115072613 + MGP_BALBcJ_P0079619 Cxcl12 protein_coding protein_coding MGP_BALBcJ_T0079620.1 MGP_BALBcJ_G0031157.1 mouse_genomes_project 6 115059832 115067374 + Cxcl12 protein_coding retained_intron MGP_BALBcJ_T0079621.1 MGP_BALBcJ_G0031157.1 mouse_genomes_project 6 115059832 115072614 + MGP_BALBcJ_P0079621 Cxcl12 protein_coding protein_coding MGP_BALBcJ_T0015644.1 MGP_BALBcJ_G0013741.1 mouse_genomes_project 6 141925572 141925775 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079999.1 MGP_BALBcJ_G0031232.1 mouse_genomes_project 6 122457989 122492549 - MGP_BALBcJ_P0079999 Clstn3 protein_coding protein_coding MGP_BALBcJ_T0080000.1 MGP_BALBcJ_G0031232.1 mouse_genomes_project 6 122458542 122460742 - Clstn3 protein_coding processed_transcript MGP_BALBcJ_T0080001.1 MGP_BALBcJ_G0031232.1 mouse_genomes_project 6 122464010 122466118 - Clstn3 protein_coding retained_intron MGP_BALBcJ_T0080002.1 MGP_BALBcJ_G0031232.1 mouse_genomes_project 6 122466142 122477662 - Clstn3 protein_coding retained_intron MGP_BALBcJ_T0080003.1 MGP_BALBcJ_G0031232.1 mouse_genomes_project 6 122483524 122485871 - Clstn3 protein_coding processed_transcript MGP_BALBcJ_T0080004.1 MGP_BALBcJ_G0031232.1 mouse_genomes_project 6 122489674 122492166 - MGP_BALBcJ_P0080004 Clstn3 protein_coding protein_coding MGP_BALBcJ_T0076566.1 MGP_BALBcJ_G0030489.1 mouse_genomes_project 6 25018742 25040651 - MGP_BALBcJ_P0076566 Zfp800 protein_coding protein_coding MGP_BALBcJ_T0076567.1 MGP_BALBcJ_G0030489.1 mouse_genomes_project 6 25019055 25184325 - MGP_BALBcJ_P0076567 Zfp800 protein_coding protein_coding MGP_BALBcJ_T0076568.1 MGP_BALBcJ_G0030489.1 mouse_genomes_project 6 25020264 25040663 - MGP_BALBcJ_P0076568 Zfp800 protein_coding protein_coding MGP_BALBcJ_T0076569.1 MGP_BALBcJ_G0030489.1 mouse_genomes_project 6 25022297 25040654 - MGP_BALBcJ_P0076569 Zfp800 protein_coding protein_coding MGP_BALBcJ_T0076570.1 MGP_BALBcJ_G0030489.1 mouse_genomes_project 6 25023224 25040672 - MGP_BALBcJ_P0076570 Zfp800 protein_coding protein_coding MGP_BALBcJ_T0080345.1 MGP_BALBcJ_G0031297.1 mouse_genomes_project 6 126339663 126386675 - MGP_BALBcJ_P0080345 Tead4 protein_coding protein_coding MGP_BALBcJ_T0080346.1 MGP_BALBcJ_G0031297.1 mouse_genomes_project 6 126339681 126387364 - MGP_BALBcJ_P0080346 Tead4 protein_coding protein_coding MGP_BALBcJ_T0080347.1 MGP_BALBcJ_G0031297.1 mouse_genomes_project 6 126382384 126412410 - MGP_BALBcJ_P0080347 Tead4 protein_coding protein_coding MGP_BALBcJ_T0080348.1 MGP_BALBcJ_G0031297.1 mouse_genomes_project 6 126382434 126412325 - MGP_BALBcJ_P0080348 Tead4 protein_coding protein_coding MGP_BALBcJ_T0076282.1 MGP_BALBcJ_G0030433.1 mouse_genomes_project 6 5230550 5317643 + MGP_BALBcJ_P0076282 Glcci1 protein_coding protein_coding MGP_BALBcJ_T0076283.1 MGP_BALBcJ_G0030433.1 mouse_genomes_project 6 5231890 5299135 + MGP_BALBcJ_P0076283 Glcci1 protein_coding protein_coding MGP_BALBcJ_T0076284.1 MGP_BALBcJ_G0030433.1 mouse_genomes_project 6 5240223 5313714 + MGP_BALBcJ_P0076284 Glcci1 protein_coding protein_coding MGP_BALBcJ_T0076285.1 MGP_BALBcJ_G0030433.1 mouse_genomes_project 6 5262828 5314163 + MGP_BALBcJ_P0076285 Glcci1 protein_coding protein_coding MGP_BALBcJ_T0076286.1 MGP_BALBcJ_G0030433.1 mouse_genomes_project 6 5299192 5311107 + Glcci1 protein_coding processed_transcript MGP_BALBcJ_T0077201.1 MGP_BALBcJ_G0030624.1 mouse_genomes_project 6 39106992 39107952 + MGP_BALBcJ_P0077201 Tas2r139 protein_coding protein_coding MGP_BALBcJ_T0004998.1 MGP_BALBcJ_G0004276.1 mouse_genomes_project 6 85828322 85833924 - Gm26636 antisense antisense MGP_BALBcJ_T0002020.1 MGP_BALBcJ_G0001933.1 mouse_genomes_project 6 75353205 75356441 - TEC TEC MGP_BALBcJ_T0015500.1 MGP_BALBcJ_G0013597.1 mouse_genomes_project 6 105115384 105115838 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015565.1 MGP_BALBcJ_G0013662.1 mouse_genomes_project 6 123037692 123038143 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005064.1 MGP_BALBcJ_G0004324.1 mouse_genomes_project 6 125186834 125188913 + antisense antisense MGP_BALBcJ_T0078545.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83925880 83994923 + Add2 protein_coding retained_intron MGP_BALBcJ_T0078546.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83925903 84022194 + MGP_BALBcJ_P0078546 Add2 protein_coding protein_coding MGP_BALBcJ_T0078547.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83925946 84007254 + MGP_BALBcJ_P0078547 Add2 protein_coding protein_coding MGP_BALBcJ_T0078548.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83949432 83990607 + MGP_BALBcJ_P0078548 Add2 protein_coding protein_coding MGP_BALBcJ_T0078549.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83975203 84017342 + MGP_BALBcJ_P0078549 Add2 protein_coding protein_coding MGP_BALBcJ_T0078550.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83975203 84007252 + MGP_BALBcJ_P0078550 Add2 protein_coding protein_coding MGP_BALBcJ_T0078551.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83975230 84017342 + MGP_BALBcJ_P0078551 Add2 protein_coding protein_coding MGP_BALBcJ_T0078552.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83979927 84016612 + MGP_BALBcJ_P0078552 Add2 protein_coding protein_coding MGP_BALBcJ_T0078553.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83979927 84006083 + MGP_BALBcJ_P0078553 Add2 protein_coding protein_coding MGP_BALBcJ_T0078554.1 MGP_BALBcJ_G0030949.1 mouse_genomes_project 6 83983007 84016588 + MGP_BALBcJ_P0078554 Add2 protein_coding protein_coding MGP_BALBcJ_T0101259.1 MGP_BALBcJ_G0039295.1 mouse_genomes_project 6 56491342 56491474 + Gm22367 snoRNA snoRNA MGP_BALBcJ_T0100015.1 MGP_BALBcJ_G0038051.1 mouse_genomes_project 6 91841606 91841712 + Gm23035 snRNA snRNA MGP_BALBcJ_T0077553.1 MGP_BALBcJ_G0030716.1 mouse_genomes_project 6 48651996 48656581 + protein_coding retained_intron MGP_BALBcJ_T0077554.1 MGP_BALBcJ_G0030716.1 mouse_genomes_project 6 48652010 48653394 + protein_coding retained_intron MGP_BALBcJ_T0077555.1 MGP_BALBcJ_G0030716.1 mouse_genomes_project 6 48652079 48660884 + MGP_BALBcJ_P0077555 protein_coding protein_coding MGP_BALBcJ_T0077556.1 MGP_BALBcJ_G0030716.1 mouse_genomes_project 6 48659741 48662667 + protein_coding retained_intron MGP_BALBcJ_T0079622.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720705 115724059 + Zfp637 protein_coding retained_intron MGP_BALBcJ_T0079623.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720705 115724753 + MGP_BALBcJ_P0079623 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079624.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720706 115725060 + MGP_BALBcJ_P0079624 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079625.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720767 115725496 + MGP_BALBcJ_P0079625 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079626.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720771 115725497 + MGP_BALBcJ_P0079626 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079627.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720793 115724954 + MGP_BALBcJ_P0079627 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079628.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720793 115724954 + MGP_BALBcJ_P0079628 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079629.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720806 115725497 + MGP_BALBcJ_P0079629 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079630.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115720806 115724954 + MGP_BALBcJ_P0079630 Zfp637 protein_coding protein_coding MGP_BALBcJ_T0079631.1 MGP_BALBcJ_G0031158.1 mouse_genomes_project 6 115722793 115725116 + Zfp637 protein_coding retained_intron MGP_BALBcJ_T0005068.1 MGP_BALBcJ_G0004327.1 mouse_genomes_project 6 125854415 125855775 + Gm42738 antisense antisense MGP_BALBcJ_T0002130.1 MGP_BALBcJ_G0002042.1 mouse_genomes_project 6 118827394 118829484 - TEC TEC MGP_BALBcJ_T0005029.1 MGP_BALBcJ_G0004295.1 mouse_genomes_project 6 106517529 106524181 - Gm44040 antisense antisense MGP_BALBcJ_T0077676.1 MGP_BALBcJ_G0030745.1 mouse_genomes_project 6 51898658 51920878 + MGP_BALBcJ_P0077676 Mturn protein_coding protein_coding MGP_BALBcJ_T0077677.1 MGP_BALBcJ_G0030745.1 mouse_genomes_project 6 51898788 51918169 + MGP_BALBcJ_P0077677 Mturn protein_coding protein_coding MGP_BALBcJ_T0077678.1 MGP_BALBcJ_G0030745.1 mouse_genomes_project 6 51898836 51906556 + Mturn protein_coding retained_intron MGP_BALBcJ_T0015569.1 MGP_BALBcJ_G0013666.1 mouse_genomes_project 6 123825636 123826026 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078287.1 MGP_BALBcJ_G0030899.1 mouse_genomes_project 6 80919545 80922948 + MGP_BALBcJ_P0078287 Mogs protein_coding protein_coding MGP_BALBcJ_T0078288.1 MGP_BALBcJ_G0030899.1 mouse_genomes_project 6 80920565 80921401 + Mogs protein_coding retained_intron MGP_BALBcJ_T0011603.1 MGP_BALBcJ_G0009728.1 mouse_genomes_project 6 14433635 14433767 + Gm27755 misc_RNA misc_RNA MGP_BALBcJ_T0077265.1 MGP_BALBcJ_G0030643.1 mouse_genomes_project 6 39730895 39731849 + MGP_BALBcJ_P0077265 Olfr453 protein_coding protein_coding MGP_BALBcJ_T0100042.1 MGP_BALBcJ_G0038078.1 mouse_genomes_project 6 135126791 135126876 + Gm25882 snRNA snRNA MGP_BALBcJ_T0004893.1 MGP_BALBcJ_G0004204.1 mouse_genomes_project 6 24994360 25039602 + 6530409C15Rik antisense antisense MGP_BALBcJ_T0004894.1 MGP_BALBcJ_G0004204.1 mouse_genomes_project 6 24994381 24997708 + 6530409C15Rik antisense antisense MGP_BALBcJ_T0001916.1 MGP_BALBcJ_G0001829.1 mouse_genomes_project 6 4572125 4573997 + TEC TEC MGP_BALBcJ_T0077740.1 MGP_BALBcJ_G0030760.1 mouse_genomes_project 6 53939687 53943147 - MGP_BALBcJ_P0077740 Lsm5 protein_coding protein_coding MGP_BALBcJ_T0077741.1 MGP_BALBcJ_G0030760.1 mouse_genomes_project 6 53939689 53943114 - Lsm5 protein_coding retained_intron MGP_BALBcJ_T0077742.1 MGP_BALBcJ_G0030760.1 mouse_genomes_project 6 53939747 53943093 - MGP_BALBcJ_P0077742 Lsm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077743.1 MGP_BALBcJ_G0030760.1 mouse_genomes_project 6 53939881 53943105 - MGP_BALBcJ_P0077743 Lsm5 protein_coding protein_coding MGP_BALBcJ_T0000183.1 MGP_BALBcJ_G0000138.1 mouse_genomes_project 6 67752980 67753547 - MGP_BALBcJ_P0000183 Igkv8-34 IG_V_gene IG_V_gene MGP_BALBcJ_T0098773.1 MGP_BALBcJ_G0036827.1 mouse_genomes_project 6 138003685 138003852 - Gm25434 scaRNA scaRNA MGP_BALBcJ_T0077168.1 MGP_BALBcJ_G0030608.1 mouse_genomes_project 6 38281472 38284443 - MGP_BALBcJ_P0077168 protein_coding protein_coding MGP_BALBcJ_T0008632.1 MGP_BALBcJ_G0006976.1 mouse_genomes_project 6 83898806 83903782 + 4930553P18Rik lincRNA lincRNA MGP_BALBcJ_T0015484.1 MGP_BALBcJ_G0013581.1 mouse_genomes_project 6 98304359 98361611 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078108.1 MGP_BALBcJ_G0030859.1 mouse_genomes_project 6 70267411 70269058 - Sh2d6 protein_coding processed_transcript MGP_BALBcJ_T0078109.1 MGP_BALBcJ_G0030859.1 mouse_genomes_project 6 70267421 70274344 - MGP_BALBcJ_P0078109 Sh2d6 protein_coding protein_coding MGP_BALBcJ_T0078110.1 MGP_BALBcJ_G0030859.1 mouse_genomes_project 6 70267423 70274433 - MGP_BALBcJ_P0078110 Sh2d6 protein_coding protein_coding MGP_BALBcJ_T0078111.1 MGP_BALBcJ_G0030859.1 mouse_genomes_project 6 70267692 70273688 - MGP_BALBcJ_P0078111 Sh2d6 protein_coding protein_coding MGP_BALBcJ_T0078112.1 MGP_BALBcJ_G0030859.1 mouse_genomes_project 6 70269094 70273783 - Sh2d6 protein_coding processed_transcript MGP_BALBcJ_T0078113.1 MGP_BALBcJ_G0030859.1 mouse_genomes_project 6 70271176 70275440 - Sh2d6 protein_coding retained_intron MGP_BALBcJ_T0078240.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854572 80857746 - MGP_BALBcJ_P0078240 Htra2 protein_coding protein_coding MGP_BALBcJ_T0078241.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854572 80857875 - MGP_BALBcJ_P0078241 Htra2 protein_coding protein_coding MGP_BALBcJ_T0078242.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854572 80857875 - MGP_BALBcJ_P0078242 Htra2 protein_coding protein_coding MGP_BALBcJ_T0078243.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854586 80857875 - MGP_BALBcJ_P0078243 Htra2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078244.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854590 80858577 - Htra2 protein_coding retained_intron MGP_BALBcJ_T0078245.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854693 80856990 - MGP_BALBcJ_P0078245 Htra2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078246.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854783 80857141 - MGP_BALBcJ_P0078246 Htra2 protein_coding protein_coding MGP_BALBcJ_T0078247.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80854792 80857141 - Htra2 protein_coding retained_intron MGP_BALBcJ_T0078248.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80855054 80857341 - MGP_BALBcJ_P0078248 Htra2 protein_coding protein_coding MGP_BALBcJ_T0078249.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80856341 80858469 - Htra2 protein_coding processed_transcript MGP_BALBcJ_T0078250.1 MGP_BALBcJ_G0030890.1 mouse_genomes_project 6 80856450 80857189 - Htra2 protein_coding processed_transcript MGP_BALBcJ_T0010796.1 MGP_BALBcJ_G0008921.1 mouse_genomes_project 6 125874897 125874957 - Mir7233 miRNA miRNA MGP_BALBcJ_T0080858.1 MGP_BALBcJ_G0031442.1 mouse_genomes_project 6 141082869 141088408 + MGP_BALBcJ_P0080858 Iapp protein_coding protein_coding MGP_BALBcJ_T0080859.1 MGP_BALBcJ_G0031442.1 mouse_genomes_project 6 141082893 141083513 + Iapp protein_coding processed_transcript MGP_BALBcJ_T0004949.1 MGP_BALBcJ_G0004248.1 mouse_genomes_project 6 64453288 64454526 - antisense antisense MGP_BALBcJ_T0008698.1 MGP_BALBcJ_G0007028.1 mouse_genomes_project 6 117797441 117803909 - 4930540M05Rik lincRNA lincRNA MGP_BALBcJ_T0015216.1 MGP_BALBcJ_G0013313.1 mouse_genomes_project 6 4556070 4556458 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102627.1 MGP_BALBcJ_G0040443.1 mouse_genomes_project 6 60435962 60436293 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015350.1 MGP_BALBcJ_G0013447.1 mouse_genomes_project 6 59799400 59800936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000172.1 MGP_BALBcJ_G0000131.1 mouse_genomes_project 6 67488503 67489098 - MGP_BALBcJ_P0000172 IG_V_gene IG_V_gene MGP_BALBcJ_T0080757.1 MGP_BALBcJ_G0031421.1 mouse_genomes_project 6 136788614 136845342 - MGP_BALBcJ_P0080757 Slc15a5 protein_coding protein_coding MGP_BALBcJ_T0080758.1 MGP_BALBcJ_G0031421.1 mouse_genomes_project 6 136788618 136875047 - Slc15a5 protein_coding retained_intron MGP_BALBcJ_T0080759.1 MGP_BALBcJ_G0031421.1 mouse_genomes_project 6 136788618 136883450 - MGP_BALBcJ_P0080759 Slc15a5 protein_coding protein_coding MGP_BALBcJ_T0080760.1 MGP_BALBcJ_G0031421.1 mouse_genomes_project 6 136826700 136838405 - MGP_BALBcJ_P0080760 Slc15a5 protein_coding protein_coding MGP_BALBcJ_T0080761.1 MGP_BALBcJ_G0031421.1 mouse_genomes_project 6 136834787 136845412 - MGP_BALBcJ_P0080761 Slc15a5 protein_coding protein_coding MGP_BALBcJ_T0080762.1 MGP_BALBcJ_G0031421.1 mouse_genomes_project 6 136838578 136859749 - Slc15a5 protein_coding retained_intron MGP_BALBcJ_T0079119.1 MGP_BALBcJ_G0031061.1 mouse_genomes_project 6 97310144 97723038 - MGP_BALBcJ_P0079119 Gm20696 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079122.1 MGP_BALBcJ_G0031061.1 mouse_genomes_project 6 97489399 97500555 - Gm20696 protein_coding retained_intron MGP_BALBcJ_T0079123.1 MGP_BALBcJ_G0031061.1 mouse_genomes_project 6 97489430 97688588 - Gm20696 protein_coding retained_intron MGP_BALBcJ_T0080588.1 MGP_BALBcJ_G0031388.1 mouse_genomes_project 6 133290459 133357814 + MGP_BALBcJ_P0080588 Borcs5 protein_coding protein_coding MGP_BALBcJ_T0080589.1 MGP_BALBcJ_G0031388.1 mouse_genomes_project 6 133291914 133358631 + MGP_BALBcJ_P0080589 Borcs5 protein_coding protein_coding MGP_BALBcJ_T0080590.1 MGP_BALBcJ_G0031388.1 mouse_genomes_project 6 133291935 133295680 + Borcs5 protein_coding retained_intron MGP_BALBcJ_T0080591.1 MGP_BALBcJ_G0031388.1 mouse_genomes_project 6 133292229 133337170 + Borcs5 protein_coding retained_intron MGP_BALBcJ_T0080592.1 MGP_BALBcJ_G0031388.1 mouse_genomes_project 6 133349050 133357914 + Borcs5 protein_coding processed_transcript MGP_BALBcJ_T0001992.1 MGP_BALBcJ_G0001905.1 mouse_genomes_project 6 55139025 55141752 + TEC TEC MGP_BALBcJ_T0005108.1 MGP_BALBcJ_G0004361.1 mouse_genomes_project 6 146762369 146795354 - Far2os2 antisense antisense MGP_BALBcJ_T0015304.1 MGP_BALBcJ_G0013401.1 mouse_genomes_project 6 45085788 45086662 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000134.1 MGP_BALBcJ_G0000102.1 mouse_genomes_project 6 65473331 65473811 + MGP_BALBcJ_P0000134 Igkv11-125 IG_V_gene IG_V_gene MGP_BALBcJ_T0000135.1 MGP_BALBcJ_G0000102.1 mouse_genomes_project 6 65473331 65473811 + MGP_BALBcJ_P0000135 Igkv11-125 IG_V_gene IG_V_gene MGP_BALBcJ_T0077846.1 MGP_BALBcJ_G0030801.1 mouse_genomes_project 6 56725664 56805992 - MGP_BALBcJ_P0077846 Gprin3 protein_coding protein_coding MGP_BALBcJ_T0015591.1 MGP_BALBcJ_G0013688.1 mouse_genomes_project 6 127169014 127170122 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080104.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122927232 122944345 - MGP_BALBcJ_P0080104 P3h3 protein_coding protein_coding MGP_BALBcJ_T0080105.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122927349 122944322 - MGP_BALBcJ_P0080105 P3h3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080106.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122927637 122928755 - P3h3 protein_coding retained_intron MGP_BALBcJ_T0080107.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122931656 122937546 - P3h3 protein_coding retained_intron MGP_BALBcJ_T0080108.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122932304 122941517 - P3h3 protein_coding retained_intron MGP_BALBcJ_T0080109.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122932346 122941420 - P3h3 protein_coding retained_intron MGP_BALBcJ_T0080110.1 MGP_BALBcJ_G0031251.1 mouse_genomes_project 6 122940988 122941763 - P3h3 protein_coding retained_intron MGP_BALBcJ_T0015265.1 MGP_BALBcJ_G0013362.1 mouse_genomes_project 6 27540464 27540695 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101938.1 MGP_BALBcJ_G0039805.1 mouse_genomes_project 6 82999647 83005051 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101939.1 MGP_BALBcJ_G0039805.1 mouse_genomes_project 6 83004543 83005507 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101940.1 MGP_BALBcJ_G0039805.1 mouse_genomes_project 6 83004746 83005762 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0078562.1 MGP_BALBcJ_G0030952.1 mouse_genomes_project 6 84281031 84289091 + MGP_BALBcJ_P0078562 Snrpg protein_coding protein_coding MGP_BALBcJ_T0078563.1 MGP_BALBcJ_G0030952.1 mouse_genomes_project 6 84281269 84286484 + Snrpg protein_coding retained_intron MGP_BALBcJ_T0078564.1 MGP_BALBcJ_G0030952.1 mouse_genomes_project 6 84281298 84288670 + Snrpg protein_coding processed_transcript MGP_BALBcJ_T0078565.1 MGP_BALBcJ_G0030952.1 mouse_genomes_project 6 84281331 84288621 + Snrpg protein_coding processed_transcript MGP_BALBcJ_T0076251.1 MGP_BALBcJ_G0030424.1 mouse_genomes_project 6 3684570 3771791 + MGP_BALBcJ_P0076251 Sdhaf3 protein_coding protein_coding MGP_BALBcJ_T0076252.1 MGP_BALBcJ_G0030424.1 mouse_genomes_project 6 3684573 3699680 + Sdhaf3 protein_coding processed_transcript MGP_BALBcJ_T0077773.1 MGP_BALBcJ_G0030772.1 mouse_genomes_project 6 54431662 54433985 + MGP_BALBcJ_P0077773 Vmn1r11 protein_coding protein_coding MGP_BALBcJ_T0078308.1 MGP_BALBcJ_G0030903.1 mouse_genomes_project 6 80961958 80968956 - MGP_BALBcJ_P0078308 Wdr54 protein_coding protein_coding MGP_BALBcJ_T0078310.1 MGP_BALBcJ_G0030903.1 mouse_genomes_project 6 80965289 80968779 - Wdr54 protein_coding retained_intron MGP_BALBcJ_T0078311.1 MGP_BALBcJ_G0030903.1 mouse_genomes_project 6 80965293 80968924 - Wdr54 protein_coding retained_intron MGP_BALBcJ_T0078312.1 MGP_BALBcJ_G0030903.1 mouse_genomes_project 6 80965865 80968824 - Wdr54 protein_coding processed_transcript MGP_BALBcJ_T0078313.1 MGP_BALBcJ_G0030903.1 mouse_genomes_project 6 80967107 80968956 - MGP_BALBcJ_P0078313 Wdr54 protein_coding protein_coding MGP_BALBcJ_T0078314.1 MGP_BALBcJ_G0030903.1 mouse_genomes_project 6 80967765 80968938 - Wdr54 protein_coding processed_transcript MGP_BALBcJ_T0008704.1 MGP_BALBcJ_G0007034.1 mouse_genomes_project 6 122397879 122400523 + Gm44006 lincRNA lincRNA MGP_BALBcJ_T0080315.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125203294 125229298 - MGP_BALBcJ_P0080315 Ccnd2 protein_coding protein_coding MGP_BALBcJ_T0080316.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125208629 125217294 - Ccnd2 protein_coding processed_transcript MGP_BALBcJ_T0080317.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125217234 125224821 - Ccnd2 protein_coding processed_transcript MGP_BALBcJ_T0080318.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125224155 125230431 - MGP_BALBcJ_P0080318 Ccnd2 protein_coding protein_coding MGP_BALBcJ_T0080319.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125225634 125229245 - Ccnd2 protein_coding retained_intron MGP_BALBcJ_T0080320.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125226416 125229271 - MGP_BALBcJ_P0080320 Ccnd2 protein_coding protein_coding MGP_BALBcJ_T0080321.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125226433 125229245 - MGP_BALBcJ_P0080321 Ccnd2 protein_coding protein_coding MGP_BALBcJ_T0080322.1 MGP_BALBcJ_G0031291.1 mouse_genomes_project 6 125229018 125229199 - Ccnd2 protein_coding processed_transcript MGP_BALBcJ_T0008709.1 MGP_BALBcJ_G0007039.1 mouse_genomes_project 6 125728693 125742879 + Gm43634 lincRNA lincRNA MGP_BALBcJ_T0081044.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145557289 145566790 + Arntl2 protein_coding processed_transcript MGP_BALBcJ_T0081045.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145557299 145594698 + MGP_BALBcJ_P0081045 Arntl2 protein_coding protein_coding MGP_BALBcJ_T0081046.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145566741 145593687 + MGP_BALBcJ_P0081046 Arntl2 protein_coding protein_coding MGP_BALBcJ_T0081047.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145566741 145593687 + MGP_BALBcJ_P0081047 Arntl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081048.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145566741 145593687 + MGP_BALBcJ_P0081048 Arntl2 protein_coding protein_coding MGP_BALBcJ_T0081049.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145566741 145593687 + MGP_BALBcJ_P0081049 Arntl2 protein_coding protein_coding MGP_BALBcJ_T0081050.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145581436 145584156 + Arntl2 protein_coding retained_intron MGP_BALBcJ_T0081051.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145583614 145584901 + Arntl2 protein_coding retained_intron MGP_BALBcJ_T0081052.1 MGP_BALBcJ_G0031474.1 mouse_genomes_project 6 145591569 145594691 + Arntl2 protein_coding retained_intron MGP_BALBcJ_T0004969.1 MGP_BALBcJ_G0004262.1 mouse_genomes_project 6 80978678 80985276 - Gm15624 antisense antisense MGP_BALBcJ_T0004970.1 MGP_BALBcJ_G0004262.1 mouse_genomes_project 6 80981892 80985298 - Gm15624 antisense antisense MGP_BALBcJ_T0004971.1 MGP_BALBcJ_G0004262.1 mouse_genomes_project 6 80982348 80985097 - Gm15624 antisense antisense MGP_BALBcJ_T0002141.1 MGP_BALBcJ_G0002053.1 mouse_genomes_project 6 125862906 125865155 - TEC TEC MGP_BALBcJ_T0080226.1 MGP_BALBcJ_G0031269.1 mouse_genomes_project 6 123298866 123305626 + MGP_BALBcJ_P0080226 Vamp1 protein_coding protein_coding MGP_BALBcJ_T0080227.1 MGP_BALBcJ_G0031269.1 mouse_genomes_project 6 123298896 123305483 + MGP_BALBcJ_P0080227 Vamp1 protein_coding protein_coding MGP_BALBcJ_T0080228.1 MGP_BALBcJ_G0031269.1 mouse_genomes_project 6 123298896 123324526 + MGP_BALBcJ_P0080228 Vamp1 protein_coding protein_coding MGP_BALBcJ_T0080229.1 MGP_BALBcJ_G0031269.1 mouse_genomes_project 6 123301896 123304975 + MGP_BALBcJ_P0080229 Vamp1 protein_coding protein_coding MGP_BALBcJ_T0080231.1 MGP_BALBcJ_G0031269.1 mouse_genomes_project 6 123314604 123329236 + Vamp1 protein_coding processed_transcript MGP_BALBcJ_T0080232.1 MGP_BALBcJ_G0031269.1 mouse_genomes_project 6 123314604 123323211 + Vamp1 protein_coding processed_transcript MGP_BALBcJ_T0080557.1 MGP_BALBcJ_G0031374.1 mouse_genomes_project 6 131258848 131259778 - MGP_BALBcJ_P0080557 Tas2r113 protein_coding protein_coding MGP_BALBcJ_T0008717.1 MGP_BALBcJ_G0007047.1 mouse_genomes_project 6 127425979 127458131 - 2310001H17Rik lincRNA lincRNA MGP_BALBcJ_T0008718.1 MGP_BALBcJ_G0007047.1 mouse_genomes_project 6 127432931 127454170 - 2310001H17Rik lincRNA lincRNA MGP_BALBcJ_T0008719.1 MGP_BALBcJ_G0007047.1 mouse_genomes_project 6 127436554 127458174 - 2310001H17Rik lincRNA lincRNA MGP_BALBcJ_T0008720.1 MGP_BALBcJ_G0007047.1 mouse_genomes_project 6 127452784 127458908 - 2310001H17Rik lincRNA lincRNA MGP_BALBcJ_T0008721.1 MGP_BALBcJ_G0007047.1 mouse_genomes_project 6 127452844 127458665 - 2310001H17Rik lincRNA lincRNA MGP_BALBcJ_T0008722.1 MGP_BALBcJ_G0007047.1 mouse_genomes_project 6 127452949 127454179 - 2310001H17Rik lincRNA lincRNA MGP_BALBcJ_T0008671.1 MGP_BALBcJ_G0007005.1 mouse_genomes_project 6 99596470 99614315 + Gm44169 lincRNA lincRNA MGP_BALBcJ_T0077769.1 MGP_BALBcJ_G0030768.1 mouse_genomes_project 6 54265568 54266485 - MGP_BALBcJ_P0077769 Vmn1r7 protein_coding protein_coding MGP_BALBcJ_T0079069.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95340827 95536939 - MGP_BALBcJ_P0079069 Frmd4b protein_coding protein_coding MGP_BALBcJ_T0079070.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95340998 95345219 - Frmd4b protein_coding retained_intron MGP_BALBcJ_T0079071.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95341048 95366743 - Frmd4b protein_coding processed_transcript MGP_BALBcJ_T0079072.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95341054 95508682 - MGP_BALBcJ_P0079072 Frmd4b protein_coding protein_coding MGP_BALBcJ_T0079073.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95361221 95366793 - Frmd4b protein_coding retained_intron MGP_BALBcJ_T0079074.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95362155 95378774 - Frmd4b protein_coding processed_transcript MGP_BALBcJ_T0079075.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95362669 95409452 - Frmd4b protein_coding retained_intron MGP_BALBcJ_T0079076.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95378291 95445702 - Frmd4b protein_coding processed_transcript MGP_BALBcJ_T0079077.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95378949 95536988 - Frmd4b protein_coding processed_transcript MGP_BALBcJ_T0079078.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95406207 95666850 - Frmd4b protein_coding retained_intron MGP_BALBcJ_T0079079.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95444752 95445670 - Frmd4b protein_coding retained_intron MGP_BALBcJ_T0079080.1 MGP_BALBcJ_G0031057.1 mouse_genomes_project 6 95445220 95480776 - MGP_BALBcJ_P0079080 Frmd4b protein_coding protein_coding MGP_BALBcJ_T0000046.1 MGP_BALBcJ_G0000038.1 mouse_genomes_project 6 68453588 68453627 + MGP_BALBcJ_P0000046 Igkj2 IG_J_gene IG_J_gene MGP_BALBcJ_T0000047.1 MGP_BALBcJ_G0000038.1 mouse_genomes_project 6 68453588 68453631 + Igkj2 IG_J_gene processed_transcript MGP_BALBcJ_T0101243.1 MGP_BALBcJ_G0039279.1 mouse_genomes_project 6 24442422 24442539 + Gm26310 snoRNA snoRNA MGP_BALBcJ_T0001972.1 MGP_BALBcJ_G0001885.1 mouse_genomes_project 6 43149106 43152516 + TEC TEC MGP_BALBcJ_T0015531.1 MGP_BALBcJ_G0013628.1 mouse_genomes_project 6 114533833 114534947 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079401.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111741670 111745448 - MGP_BALBcJ_P0079401 Ghrl protein_coding protein_coding MGP_BALBcJ_T0079402.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111741670 111743244 - MGP_BALBcJ_P0079402 Ghrl protein_coding protein_coding MGP_BALBcJ_T0079403.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111741675 111745026 - MGP_BALBcJ_P0079403 Ghrl protein_coding protein_coding MGP_BALBcJ_T0079404.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111741683 111745416 - MGP_BALBcJ_P0079404 Ghrl protein_coding protein_coding MGP_BALBcJ_T0079405.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111741723 111745015 - MGP_BALBcJ_P0079405 Ghrl protein_coding protein_coding MGP_BALBcJ_T0079406.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111741801 111744997 - MGP_BALBcJ_P0079406 Ghrl protein_coding protein_coding MGP_BALBcJ_T0079407.1 MGP_BALBcJ_G0031116.1 mouse_genomes_project 6 111744744 111745022 - Ghrl protein_coding retained_intron MGP_BALBcJ_T0005600.1 MGP_BALBcJ_G0004720.1 mouse_genomes_project 6 58666872 58669105 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005601.1 MGP_BALBcJ_G0004720.1 mouse_genomes_project 6 58668562 58674843 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005602.1 MGP_BALBcJ_G0004720.1 mouse_genomes_project 6 58670593 58675383 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0002121.1 MGP_BALBcJ_G0002034.1 mouse_genomes_project 6 113837393 113838232 - TEC TEC MGP_BALBcJ_T0079396.1 MGP_BALBcJ_G0031115.1 mouse_genomes_project 6 111722646 111736666 + MGP_BALBcJ_P0079396 Tatdn2 protein_coding protein_coding MGP_BALBcJ_T0079397.1 MGP_BALBcJ_G0031115.1 mouse_genomes_project 6 111723160 111736546 + MGP_BALBcJ_P0079397 Tatdn2 protein_coding protein_coding MGP_BALBcJ_T0079398.1 MGP_BALBcJ_G0031115.1 mouse_genomes_project 6 111723269 111735802 + MGP_BALBcJ_P0079398 Tatdn2 protein_coding protein_coding MGP_BALBcJ_T0079399.1 MGP_BALBcJ_G0031115.1 mouse_genomes_project 6 111730413 111736663 + MGP_BALBcJ_P0079399 Tatdn2 protein_coding protein_coding MGP_BALBcJ_T0079400.1 MGP_BALBcJ_G0031115.1 mouse_genomes_project 6 111732872 111736046 + MGP_BALBcJ_P0079400 Tatdn2 protein_coding protein_coding MGP_BALBcJ_T0015344.1 MGP_BALBcJ_G0013441.1 mouse_genomes_project 6 57352443 57353401 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018210.1 MGP_BALBcJ_G0015565.1 mouse_genomes_project 6 36480907 36495044 + 8030453O22Rik processed_transcript antisense MGP_BALBcJ_T0018211.1 MGP_BALBcJ_G0015565.1 mouse_genomes_project 6 36480916 36498604 + 8030453O22Rik processed_transcript antisense MGP_BALBcJ_T0018212.1 MGP_BALBcJ_G0015565.1 mouse_genomes_project 6 36480920 36481669 + 8030453O22Rik processed_transcript retained_intron MGP_BALBcJ_T0080800.1 MGP_BALBcJ_G0031429.1 mouse_genomes_project 6 138819008 138819915 + Capza3 protein_coding processed_transcript MGP_BALBcJ_T0080801.1 MGP_BALBcJ_G0031429.1 mouse_genomes_project 6 138819313 138820535 + MGP_BALBcJ_P0080801 Capza3 protein_coding protein_coding MGP_BALBcJ_T0002040.1 MGP_BALBcJ_G0001953.1 mouse_genomes_project 6 83497265 83499563 + TEC TEC MGP_BALBcJ_T0015279.1 MGP_BALBcJ_G0013376.1 mouse_genomes_project 6 36607611 36608127 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015332.1 MGP_BALBcJ_G0013429.1 mouse_genomes_project 6 50989018 50989775 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015628.1 MGP_BALBcJ_G0013725.1 mouse_genomes_project 6 135080445 135081631 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002182.1 MGP_BALBcJ_G0002094.1 mouse_genomes_project 6 147138422 147143870 - TEC TEC MGP_BALBcJ_T0100024.1 MGP_BALBcJ_G0038060.1 mouse_genomes_project 6 110531870 110531973 + Gm27944 snRNA snRNA MGP_BALBcJ_T0002710.1 MGP_BALBcJ_G0002586.1 mouse_genomes_project 6 38054236 38054526 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0008613.1 MGP_BALBcJ_G0006962.1 mouse_genomes_project 6 70713534 70717950 + Gm26640 lincRNA lincRNA MGP_BALBcJ_T0080136.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123044848 123051981 - MGP_BALBcJ_P0080136 Cops7a protein_coding protein_coding MGP_BALBcJ_T0080137.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123045251 123051891 - MGP_BALBcJ_P0080137 Cops7a protein_coding protein_coding MGP_BALBcJ_T0080138.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123045669 123046577 - Cops7a protein_coding retained_intron MGP_BALBcJ_T0080139.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123046342 123051733 - MGP_BALBcJ_P0080139 Cops7a protein_coding protein_coding MGP_BALBcJ_T0080140.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123047593 123051851 - MGP_BALBcJ_P0080140 Cops7a protein_coding protein_coding MGP_BALBcJ_T0080141.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123049058 123051650 - MGP_BALBcJ_P0080141 Cops7a protein_coding protein_coding MGP_BALBcJ_T0080142.1 MGP_BALBcJ_G0031257.1 mouse_genomes_project 6 123050996 123051955 - Cops7a protein_coding retained_intron MGP_BALBcJ_T0015571.1 MGP_BALBcJ_G0013668.1 mouse_genomes_project 6 125015853 125016753 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011644.1 MGP_BALBcJ_G0009769.1 mouse_genomes_project 6 109657036 109657332 + Gm24005 misc_RNA misc_RNA MGP_BALBcJ_T0015423.1 MGP_BALBcJ_G0013520.1 mouse_genomes_project 6 73923868 73925141 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078632.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84770590 84926539 + MGP_BALBcJ_P0078632 Aak1 protein_coding protein_coding MGP_BALBcJ_T0078633.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84770605 84857383 + MGP_BALBcJ_P0078633 Aak1 protein_coding protein_coding MGP_BALBcJ_T0078634.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84770701 84872883 + Aak1 protein_coding retained_intron MGP_BALBcJ_T0078635.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84771126 84915821 + MGP_BALBcJ_P0078635 Aak1 protein_coding unknown_likely_coding MGP_BALBcJ_T0078636.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84771126 84915180 + MGP_BALBcJ_P0078636 Aak1 protein_coding protein_coding MGP_BALBcJ_T0078637.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84772258 84857378 + Aak1 protein_coding processed_transcript MGP_BALBcJ_T0078638.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84880124 84919211 + MGP_BALBcJ_P0078638 Aak1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078639.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84888464 84919534 + Aak1 protein_coding processed_transcript MGP_BALBcJ_T0078640.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84908577 84911345 + Aak1 protein_coding retained_intron MGP_BALBcJ_T0078641.1 MGP_BALBcJ_G0030963.1 mouse_genomes_project 6 84918325 84919990 + Aak1 protein_coding processed_transcript MGP_BALBcJ_T0015466.1 MGP_BALBcJ_G0013563.1 mouse_genomes_project 6 91170482 91171469 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080802.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139219102 139394826 + MGP_BALBcJ_P0080802 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080803.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139219208 139387200 + MGP_BALBcJ_P0080803 Plekha5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080804.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139219209 139384384 + MGP_BALBcJ_P0080804 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080805.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139228037 139350993 + MGP_BALBcJ_P0080805 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080806.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139312926 139350994 + MGP_BALBcJ_P0080806 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080807.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139321362 139384384 + MGP_BALBcJ_P0080807 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080808.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139333164 139394826 + Plekha5 protein_coding processed_transcript MGP_BALBcJ_T0080809.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139341951 139394826 + MGP_BALBcJ_P0080809 Plekha5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080810.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139341977 139355922 + Plekha5 protein_coding processed_transcript MGP_BALBcJ_T0080811.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139341981 139394826 + MGP_BALBcJ_P0080811 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080812.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139342116 139394826 + MGP_BALBcJ_P0080812 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080813.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139366457 139394832 + MGP_BALBcJ_P0080813 Plekha5 protein_coding unknown_likely_coding MGP_BALBcJ_T0080814.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139367289 139377596 + Plekha5 protein_coding retained_intron MGP_BALBcJ_T0080815.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139374775 139377603 + Plekha5 protein_coding retained_intron MGP_BALBcJ_T0080816.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139374963 139394826 + MGP_BALBcJ_P0080816 Plekha5 protein_coding protein_coding MGP_BALBcJ_T0080817.1 MGP_BALBcJ_G0031430.1 mouse_genomes_project 6 139379680 139381825 + Plekha5 protein_coding retained_intron MGP_BALBcJ_T0101253.1 MGP_BALBcJ_G0039289.1 mouse_genomes_project 6 49841311 49841433 - Gm24355 snoRNA snoRNA MGP_BALBcJ_T0081053.1 MGP_BALBcJ_G0031475.1 mouse_genomes_project 6 145611739 145640496 + MGP_BALBcJ_P0081053 Smco2 protein_coding protein_coding MGP_BALBcJ_T0081054.1 MGP_BALBcJ_G0031475.1 mouse_genomes_project 6 145611792 145618958 + Smco2 protein_coding retained_intron MGP_BALBcJ_T0081055.1 MGP_BALBcJ_G0031475.1 mouse_genomes_project 6 145619643 145626647 + Smco2 protein_coding processed_transcript MGP_BALBcJ_T0081056.1 MGP_BALBcJ_G0031475.1 mouse_genomes_project 6 145624417 145637035 + Smco2 protein_coding processed_transcript MGP_BALBcJ_T0018244.1 MGP_BALBcJ_G0015576.1 mouse_genomes_project 6 64349208 64350013 - 4930597O21Rik processed_transcript retained_intron MGP_BALBcJ_T0018245.1 MGP_BALBcJ_G0015576.1 mouse_genomes_project 6 64349210 64351221 - 4930597O21Rik processed_transcript bidirectional_promoter_lncRNA MGP_BALBcJ_T0077188.1 MGP_BALBcJ_G0030618.1 mouse_genomes_project 6 38745485 38750545 - MGP_BALBcJ_P0077188 Olfr459 protein_coding protein_coding MGP_BALBcJ_T0077189.1 MGP_BALBcJ_G0030618.1 mouse_genomes_project 6 38745485 38746594 - MGP_BALBcJ_P0077189 Olfr459 protein_coding protein_coding MGP_BALBcJ_T0080123.1 MGP_BALBcJ_G0031255.1 mouse_genomes_project 6 123000312 123004581 - MGP_BALBcJ_P0080123 Ptms protein_coding protein_coding MGP_BALBcJ_T0080124.1 MGP_BALBcJ_G0031255.1 mouse_genomes_project 6 123000319 123001309 - Ptms protein_coding processed_transcript MGP_BALBcJ_T0080125.1 MGP_BALBcJ_G0031255.1 mouse_genomes_project 6 123000395 123006731 - Ptms protein_coding processed_transcript MGP_BALBcJ_T0080126.1 MGP_BALBcJ_G0031255.1 mouse_genomes_project 6 123000680 123001859 - Ptms protein_coding retained_intron MGP_BALBcJ_T0080127.1 MGP_BALBcJ_G0031255.1 mouse_genomes_project 6 123001275 123002164 - Ptms protein_coding processed_transcript MGP_BALBcJ_T0101950.1 MGP_BALBcJ_G0039811.1 mouse_genomes_project 6 127215687 127222111 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101951.1 MGP_BALBcJ_G0039811.1 mouse_genomes_project 6 127220165 127222103 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0015528.1 MGP_BALBcJ_G0013625.1 mouse_genomes_project 6 113059596 113060431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099990.1 MGP_BALBcJ_G0038026.1 mouse_genomes_project 6 17865410 17865513 + Gm26373 snRNA snRNA MGP_BALBcJ_T0101284.1 MGP_BALBcJ_G0039320.1 mouse_genomes_project 6 113715203 113715343 - Snora7a snoRNA snoRNA MGP_BALBcJ_T0010749.1 MGP_BALBcJ_G0008874.1 mouse_genomes_project 6 47719422 47719533 + Mir6371 miRNA miRNA MGP_BALBcJ_T0011622.1 MGP_BALBcJ_G0009747.1 mouse_genomes_project 6 49356878 49356980 + Gm27868 misc_RNA misc_RNA MGP_BALBcJ_T0078091.1 MGP_BALBcJ_G0030856.1 mouse_genomes_project 6 70136732 70142293 - MGP_BALBcJ_P0078091 Vamp8 protein_coding protein_coding MGP_BALBcJ_T0078092.1 MGP_BALBcJ_G0030856.1 mouse_genomes_project 6 70136737 70141501 - MGP_BALBcJ_P0078092 Vamp8 protein_coding protein_coding MGP_BALBcJ_T0079061.1 MGP_BALBcJ_G0031054.1 mouse_genomes_project 6 95227443 95249316 - MGP_BALBcJ_P0079061 Uba3 protein_coding protein_coding MGP_BALBcJ_T0079062.1 MGP_BALBcJ_G0031054.1 mouse_genomes_project 6 95227591 95249315 - MGP_BALBcJ_P0079062 Uba3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079063.1 MGP_BALBcJ_G0031054.1 mouse_genomes_project 6 95227780 95249403 - MGP_BALBcJ_P0079063 Uba3 protein_coding protein_coding MGP_BALBcJ_T0079064.1 MGP_BALBcJ_G0031054.1 mouse_genomes_project 6 95239077 95241253 - Uba3 protein_coding retained_intron MGP_BALBcJ_T0079065.1 MGP_BALBcJ_G0031054.1 mouse_genomes_project 6 95246769 95249321 - Uba3 protein_coding retained_intron MGP_BALBcJ_T0079066.1 MGP_BALBcJ_G0031054.1 mouse_genomes_project 6 95247846 95249324 - Uba3 protein_coding retained_intron MGP_BALBcJ_T0080535.1 MGP_BALBcJ_G0031353.1 mouse_genomes_project 6 129841911 129846556 + MGP_BALBcJ_P0080535 protein_coding protein_coding MGP_BALBcJ_T0077655.1 MGP_BALBcJ_G0030740.1 mouse_genomes_project 6 51539254 51541333 + Prr15 protein_coding retained_intron MGP_BALBcJ_T0077656.1 MGP_BALBcJ_G0030740.1 mouse_genomes_project 6 51540302 51543618 + MGP_BALBcJ_P0077656 Prr15 protein_coding protein_coding MGP_BALBcJ_T0015476.1 MGP_BALBcJ_G0013573.1 mouse_genomes_project 6 93976738 93977927 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005047.1 MGP_BALBcJ_G0004308.1 mouse_genomes_project 6 114015625 114035836 + Gm20404 antisense antisense MGP_BALBcJ_T0077151.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37590510 37621894 + MGP_BALBcJ_P0077151 Mgam protein_coding protein_coding MGP_BALBcJ_T0077152.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37590510 37739971 + MGP_BALBcJ_P0077152 Mgam protein_coding protein_coding MGP_BALBcJ_T0077153.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37590510 37739971 + MGP_BALBcJ_P0077153 Mgam protein_coding protein_coding MGP_BALBcJ_T0077154.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37604872 37739132 + MGP_BALBcJ_P0077154 Mgam protein_coding unknown_likely_coding MGP_BALBcJ_T0077155.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37604872 37739132 + MGP_BALBcJ_P0077155 Mgam protein_coding unknown_likely_coding MGP_BALBcJ_T0077156.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37719455 37739962 + Mgam protein_coding processed_transcript MGP_BALBcJ_T0077157.1 MGP_BALBcJ_G0030599.1 mouse_genomes_project 6 37719907 37721008 + Mgam protein_coding processed_transcript MGP_BALBcJ_T0079513.1 MGP_BALBcJ_G0031137.1 mouse_genomes_project 6 113742859 113755534 - MGP_BALBcJ_P0079513 Mbd4 protein_coding protein_coding MGP_BALBcJ_T0079514.1 MGP_BALBcJ_G0031137.1 mouse_genomes_project 6 113743361 113750868 - Mbd4 protein_coding processed_transcript MGP_BALBcJ_T0079515.1 MGP_BALBcJ_G0031137.1 mouse_genomes_project 6 113744506 113755528 - MGP_BALBcJ_P0079515 Mbd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079516.1 MGP_BALBcJ_G0031137.1 mouse_genomes_project 6 113744506 113751129 - MGP_BALBcJ_P0079516 Mbd4 protein_coding protein_coding MGP_BALBcJ_T0079517.1 MGP_BALBcJ_G0031137.1 mouse_genomes_project 6 113749854 113755451 - MGP_BALBcJ_P0079517 Mbd4 protein_coding protein_coding MGP_BALBcJ_T0078513.1 MGP_BALBcJ_G0030941.1 mouse_genomes_project 6 83674365 83678120 - MGP_BALBcJ_P0078513 Nat8f5 protein_coding protein_coding MGP_BALBcJ_T0100029.1 MGP_BALBcJ_G0038065.1 mouse_genomes_project 6 118049197 118049304 - Gm25327 snRNA snRNA MGP_BALBcJ_T0101941.1 MGP_BALBcJ_G0039806.1 mouse_genomes_project 6 83524578 83556755 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101942.1 MGP_BALBcJ_G0039806.1 mouse_genomes_project 6 83544874 83556755 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0000270.1 MGP_BALBcJ_G0000211.1 mouse_genomes_project 6 65183689 65184144 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0079877.1 MGP_BALBcJ_G0031199.1 mouse_genomes_project 6 119565551 119569546 + MGP_BALBcJ_P0079877 A2m protein_coding protein_coding MGP_BALBcJ_T0079878.1 MGP_BALBcJ_G0031199.1 mouse_genomes_project 6 119566403 119607493 + MGP_BALBcJ_P0079878 A2m protein_coding protein_coding MGP_BALBcJ_T0079879.1 MGP_BALBcJ_G0031199.1 mouse_genomes_project 6 119586658 119589237 + A2m protein_coding retained_intron MGP_BALBcJ_T0076658.1 MGP_BALBcJ_G0030507.1 mouse_genomes_project 6 26265744 26268524 + MGP_BALBcJ_P0076658 Atp6v1f protein_coding protein_coding MGP_BALBcJ_T0076659.1 MGP_BALBcJ_G0030507.1 mouse_genomes_project 6 26266094 26268524 + MGP_BALBcJ_P0076659 Atp6v1f protein_coding protein_coding MGP_BALBcJ_T0076660.1 MGP_BALBcJ_G0030507.1 mouse_genomes_project 6 26266094 26268524 + MGP_BALBcJ_P0076660 Atp6v1f protein_coding protein_coding MGP_BALBcJ_T0079370.1 MGP_BALBcJ_G0031109.1 mouse_genomes_project 6 111537885 111554656 - MGP_BALBcJ_P0079370 Emc3 protein_coding protein_coding MGP_BALBcJ_T0079371.1 MGP_BALBcJ_G0031109.1 mouse_genomes_project 6 111542803 111543921 - Emc3 protein_coding retained_intron MGP_BALBcJ_T0079372.1 MGP_BALBcJ_G0031109.1 mouse_genomes_project 6 111553406 111554622 - Emc3 protein_coding retained_intron MGP_BALBcJ_T0002647.1 MGP_BALBcJ_G0002533.1 mouse_genomes_project 6 37863812 37864469 + MGP_BALBcJ_P0002647 Trbv1 TR_V_gene TR_V_gene MGP_BALBcJ_T0015499.1 MGP_BALBcJ_G0013596.1 mouse_genomes_project 6 103570930 103571238 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001997.1 MGP_BALBcJ_G0001910.1 mouse_genomes_project 6 68846391 68847297 - TEC TEC MGP_BALBcJ_T0010794.1 MGP_BALBcJ_G0008919.1 mouse_genomes_project 6 123279364 123279451 + Mir3098 miRNA miRNA MGP_BALBcJ_T0002716.1 MGP_BALBcJ_G0002592.1 mouse_genomes_project 6 38189939 38190406 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0004906.1 MGP_BALBcJ_G0004215.1 mouse_genomes_project 6 31165606 31200096 + Gm14546 antisense antisense MGP_BALBcJ_T0004889.1 MGP_BALBcJ_G0004200.1 mouse_genomes_project 6 14582318 14582919 - Gm26738 antisense antisense MGP_BALBcJ_T0002562.1 MGP_BALBcJ_G0002464.1 mouse_genomes_project 6 38515515 38515565 + MGP_BALBcJ_P0002562 Trbj1-5 TR_J_gene TR_J_gene MGP_BALBcJ_T0101301.1 MGP_BALBcJ_G0039337.1 mouse_genomes_project 6 134258810 134258925 + Gm25136 snoRNA snoRNA MGP_BALBcJ_T0076181.1 MGP_BALBcJ_G0030410.1 mouse_genomes_project 6 1318880 1361547 + MGP_BALBcJ_P0076181 protein_coding protein_coding MGP_BALBcJ_T0076182.1 MGP_BALBcJ_G0030410.1 mouse_genomes_project 6 1318990 1341953 + MGP_BALBcJ_P0076182 protein_coding protein_coding MGP_BALBcJ_T0076183.1 MGP_BALBcJ_G0030410.1 mouse_genomes_project 6 1349333 1359174 + MGP_BALBcJ_P0076183 protein_coding protein_coding MGP_BALBcJ_T0078457.1 MGP_BALBcJ_G0030926.1 mouse_genomes_project 6 82952322 82967814 - protein_coding lincRNA MGP_BALBcJ_T0001928.1 MGP_BALBcJ_G0001841.1 mouse_genomes_project 6 20028675 20030908 + TEC TEC MGP_BALBcJ_T0078155.1 MGP_BALBcJ_G0030868.1 mouse_genomes_project 6 71008786 71037692 + MGP_BALBcJ_P0078155 Suclg1 protein_coding protein_coding MGP_BALBcJ_T0078156.1 MGP_BALBcJ_G0030868.1 mouse_genomes_project 6 71009056 71024555 + MGP_BALBcJ_P0078156 Suclg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078157.1 MGP_BALBcJ_G0030868.1 mouse_genomes_project 6 71009064 71037685 + MGP_BALBcJ_P0078157 Suclg1 protein_coding protein_coding MGP_BALBcJ_T0078158.1 MGP_BALBcJ_G0030868.1 mouse_genomes_project 6 71009065 71017841 + Suclg1 protein_coding processed_transcript MGP_BALBcJ_T0078159.1 MGP_BALBcJ_G0030868.1 mouse_genomes_project 6 71009072 71023326 + Suclg1 protein_coding retained_intron MGP_BALBcJ_T0078160.1 MGP_BALBcJ_G0030868.1 mouse_genomes_project 6 71020616 71024551 + Suclg1 protein_coding retained_intron MGP_BALBcJ_T0079004.1 MGP_BALBcJ_G0031041.1 mouse_genomes_project 6 90844221 90871152 + MGP_BALBcJ_P0079004 A730049H05Rik protein_coding protein_coding MGP_BALBcJ_T0079005.1 MGP_BALBcJ_G0031041.1 mouse_genomes_project 6 90855404 90875256 + A730049H05Rik protein_coding processed_transcript MGP_BALBcJ_T0001986.1 MGP_BALBcJ_G0001899.1 mouse_genomes_project 6 51910678 51911090 + TEC TEC MGP_BALBcJ_T0076962.1 MGP_BALBcJ_G0030553.1 mouse_genomes_project 6 32153095 32193291 - MGP_BALBcJ_P0076962 Slc13a4 protein_coding protein_coding MGP_BALBcJ_T0076963.1 MGP_BALBcJ_G0030553.1 mouse_genomes_project 6 32165479 32173334 - Slc13a4 protein_coding retained_intron MGP_BALBcJ_T0076964.1 MGP_BALBcJ_G0030553.1 mouse_genomes_project 6 32171662 32193289 - Slc13a4 protein_coding retained_intron MGP_BALBcJ_T0078873.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88386328 88413718 - MGP_BALBcJ_P0078873 Cfap100 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078874.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88386585 88413363 - MGP_BALBcJ_P0078874 Cfap100 protein_coding protein_coding MGP_BALBcJ_T0078875.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88386586 88413353 - MGP_BALBcJ_P0078875 Cfap100 protein_coding unknown_likely_coding MGP_BALBcJ_T0078876.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88386587 88413344 - MGP_BALBcJ_P0078876 Cfap100 protein_coding protein_coding MGP_BALBcJ_T0078877.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88405627 88413728 - MGP_BALBcJ_P0078877 Cfap100 protein_coding protein_coding MGP_BALBcJ_T0078878.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88405840 88413366 - MGP_BALBcJ_P0078878 Cfap100 protein_coding protein_coding MGP_BALBcJ_T0078879.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88411414 88413326 - MGP_BALBcJ_P0078879 Cfap100 protein_coding protein_coding MGP_BALBcJ_T0078880.1 MGP_BALBcJ_G0031017.1 mouse_genomes_project 6 88412826 88413516 - Cfap100 protein_coding processed_transcript MGP_BALBcJ_T0011624.1 MGP_BALBcJ_G0009749.1 mouse_genomes_project 6 49442471 49442567 + Gm28032 misc_RNA misc_RNA MGP_BALBcJ_T0077502.1 MGP_BALBcJ_G0030706.1 mouse_genomes_project 6 46548349 46625887 + MGP_BALBcJ_P0077502 Stk31 protein_coding protein_coding MGP_BALBcJ_T0077503.1 MGP_BALBcJ_G0030706.1 mouse_genomes_project 6 46548380 46625738 + MGP_BALBcJ_P0077503 Stk31 protein_coding protein_coding MGP_BALBcJ_T0077504.1 MGP_BALBcJ_G0030706.1 mouse_genomes_project 6 46548380 46625738 + MGP_BALBcJ_P0077504 Stk31 protein_coding protein_coding MGP_BALBcJ_T0077505.1 MGP_BALBcJ_G0030706.1 mouse_genomes_project 6 46551091 46625738 + MGP_BALBcJ_P0077505 Stk31 protein_coding unknown_likely_coding MGP_BALBcJ_T0077506.1 MGP_BALBcJ_G0030706.1 mouse_genomes_project 6 46591399 46625886 + MGP_BALBcJ_P0077506 Stk31 protein_coding protein_coding MGP_BALBcJ_T0008655.1 MGP_BALBcJ_G0006993.1 mouse_genomes_project 6 89421817 89431987 - 4930471M09Rik lincRNA lincRNA MGP_BALBcJ_T0008656.1 MGP_BALBcJ_G0006993.1 mouse_genomes_project 6 89430050 89432045 - 4930471M09Rik lincRNA lincRNA MGP_BALBcJ_T0078755.1 MGP_BALBcJ_G0030989.1 mouse_genomes_project 6 86400535 86432487 + MGP_BALBcJ_P0078755 Ruvbl1 protein_coding protein_coding MGP_BALBcJ_T0078756.1 MGP_BALBcJ_G0030989.1 mouse_genomes_project 6 86400853 86418146 + MGP_BALBcJ_P0078756 Ruvbl1 protein_coding protein_coding MGP_BALBcJ_T0008750.1 MGP_BALBcJ_G0007065.1 mouse_genomes_project 6 142383809 142442204 - 1700060C16Rik lincRNA lincRNA MGP_BALBcJ_T0008743.1 MGP_BALBcJ_G0007062.1 mouse_genomes_project 6 141896334 141944855 - Gm31108 lincRNA lincRNA MGP_BALBcJ_T0081148.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147897596 147903157 + MGP_BALBcJ_P0081148 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081149.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899260 147910068 + MGP_BALBcJ_P0081149 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081150.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899260 147910063 + MGP_BALBcJ_P0081150 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081151.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899263 147904003 + MGP_BALBcJ_P0081151 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081152.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899301 147904003 + MGP_BALBcJ_P0081152 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081153.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899311 147909295 + MGP_BALBcJ_P0081153 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081154.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899321 147910068 + MGP_BALBcJ_P0081154 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081155.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899385 147909310 + MGP_BALBcJ_P0081155 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0081156.1 MGP_BALBcJ_G0031492.1 mouse_genomes_project 6 147899393 147910068 + MGP_BALBcJ_P0081156 Mettl20 protein_coding protein_coding MGP_BALBcJ_T0015429.1 MGP_BALBcJ_G0013526.1 mouse_genomes_project 6 76846274 76846983 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002050.1 MGP_BALBcJ_G0001963.1 mouse_genomes_project 6 85068400 85070514 - TEC TEC MGP_BALBcJ_T0015258.1 MGP_BALBcJ_G0013355.1 mouse_genomes_project 6 21796916 21797712 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015242.1 MGP_BALBcJ_G0013339.1 mouse_genomes_project 6 15568517 15569025 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000281.1 MGP_BALBcJ_G0000222.1 mouse_genomes_project 6 65868418 65869151 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0002091.1 MGP_BALBcJ_G0002004.1 mouse_genomes_project 6 95628852 95630525 - TEC TEC MGP_BALBcJ_T0018271.1 MGP_BALBcJ_G0015586.1 mouse_genomes_project 6 123119284 123130795 + Gm44597 processed_transcript retained_intron MGP_BALBcJ_T0018272.1 MGP_BALBcJ_G0015586.1 mouse_genomes_project 6 123119313 123130750 + Gm44597 processed_transcript retained_intron MGP_BALBcJ_T0008769.1 MGP_BALBcJ_G0007080.1 mouse_genomes_project 6 147745061 147747684 + Gm26540 lincRNA lincRNA MGP_BALBcJ_T0076817.1 MGP_BALBcJ_G0030529.1 mouse_genomes_project 6 27702531 27709006 - Tsga13 protein_coding processed_transcript MGP_BALBcJ_T0076818.1 MGP_BALBcJ_G0030529.1 mouse_genomes_project 6 27702531 27722017 - MGP_BALBcJ_P0076818 Tsga13 protein_coding protein_coding MGP_BALBcJ_T0076819.1 MGP_BALBcJ_G0030529.1 mouse_genomes_project 6 27702765 27706039 - Tsga13 protein_coding retained_intron MGP_BALBcJ_T0100014.1 MGP_BALBcJ_G0038050.1 mouse_genomes_project 6 81548785 81548882 + Gm25054 snRNA snRNA MGP_BALBcJ_T0077774.1 MGP_BALBcJ_G0030773.1 mouse_genomes_project 6 54453350 54454285 + MGP_BALBcJ_P0077774 Vmn1r12 protein_coding protein_coding MGP_BALBcJ_T0015481.1 MGP_BALBcJ_G0013578.1 mouse_genomes_project 6 96909636 96910112 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002171.1 MGP_BALBcJ_G0002083.1 mouse_genomes_project 6 143937438 143940614 - TEC TEC MGP_BALBcJ_T0015226.1 MGP_BALBcJ_G0013323.1 mouse_genomes_project 6 9251793 9253498 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100006.1 MGP_BALBcJ_G0038042.1 mouse_genomes_project 6 61909075 61909178 + Gm25205 snRNA snRNA MGP_BALBcJ_T0005004.1 MGP_BALBcJ_G0004279.1 mouse_genomes_project 6 86381384 86382202 + Gm44264 antisense antisense MGP_BALBcJ_T0077088.1 MGP_BALBcJ_G0030581.1 mouse_genomes_project 6 36415151 36512005 - MGP_BALBcJ_P0077088 Dennd2a protein_coding protein_coding MGP_BALBcJ_T0077089.1 MGP_BALBcJ_G0030581.1 mouse_genomes_project 6 36416026 36441228 - Dennd2a protein_coding retained_intron MGP_BALBcJ_T0077090.1 MGP_BALBcJ_G0030581.1 mouse_genomes_project 6 36420977 36423098 - Dennd2a protein_coding retained_intron MGP_BALBcJ_T0077091.1 MGP_BALBcJ_G0030581.1 mouse_genomes_project 6 36436640 36438518 - Dennd2a protein_coding retained_intron MGP_BALBcJ_T0077092.1 MGP_BALBcJ_G0030581.1 mouse_genomes_project 6 36449033 36512005 - MGP_BALBcJ_P0077092 Dennd2a protein_coding protein_coding MGP_BALBcJ_T0011639.1 MGP_BALBcJ_G0009764.1 mouse_genomes_project 6 82907393 82907648 + Gm26353 misc_RNA misc_RNA MGP_BALBcJ_T0000143.1 MGP_BALBcJ_G0000109.1 mouse_genomes_project 6 65843757 65844539 + MGP_BALBcJ_P0000143 Igkv1-117 IG_V_gene IG_V_gene MGP_BALBcJ_T0077507.1 MGP_BALBcJ_G0030707.1 mouse_genomes_project 6 46968025 46974812 + MGP_BALBcJ_P0077507 Npy protein_coding protein_coding MGP_BALBcJ_T0015648.1 MGP_BALBcJ_G0013745.1 mouse_genomes_project 6 145521431 145540792 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077725.1 MGP_BALBcJ_G0030758.1 mouse_genomes_project 6 53258619 53273994 + MGP_BALBcJ_P0077725 Ppp1r17 protein_coding protein_coding MGP_BALBcJ_T0081001.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 144863186 145257451 - MGP_BALBcJ_P0081001 Itpr2 protein_coding protein_coding MGP_BALBcJ_T0081002.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 144866367 145257185 - MGP_BALBcJ_P0081002 Itpr2 protein_coding protein_coding MGP_BALBcJ_T0081003.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 144875488 144902096 - Itpr2 protein_coding processed_transcript MGP_BALBcJ_T0081004.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 144935403 144984982 - MGP_BALBcJ_P0081004 Itpr2 protein_coding protein_coding MGP_BALBcJ_T0081005.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 144935478 144952348 - Itpr2 protein_coding processed_transcript MGP_BALBcJ_T0081006.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 144988384 144989888 - Itpr2 protein_coding retained_intron MGP_BALBcJ_T0081007.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 145044591 145048394 - Itpr2 protein_coding retained_intron MGP_BALBcJ_T0081008.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 145113536 145152429 - MGP_BALBcJ_P0081008 Itpr2 protein_coding protein_coding MGP_BALBcJ_T0081009.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 145129717 145257496 - MGP_BALBcJ_P0081009 Itpr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081010.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 145137300 145257451 - Itpr2 protein_coding retained_intron MGP_BALBcJ_T0081011.1 MGP_BALBcJ_G0031468.1 mouse_genomes_project 6 145177044 145257151 - Itpr2 protein_coding processed_transcript MGP_BALBcJ_T0010778.1 MGP_BALBcJ_G0008903.1 mouse_genomes_project 6 106487881 106487942 + Mir7661 miRNA miRNA MGP_BALBcJ_T0078404.1 MGP_BALBcJ_G0030921.1 mouse_genomes_project 6 81638603 81665784 - MGP_BALBcJ_P0078404 Paip2b protein_coding protein_coding MGP_BALBcJ_T0078405.1 MGP_BALBcJ_G0030921.1 mouse_genomes_project 6 81641964 81643504 - Paip2b protein_coding retained_intron MGP_BALBcJ_T0078406.1 MGP_BALBcJ_G0030921.1 mouse_genomes_project 6 81643017 81665756 - Paip2b protein_coding retained_intron MGP_BALBcJ_T0078407.1 MGP_BALBcJ_G0030921.1 mouse_genomes_project 6 81646919 81665756 - Paip2b protein_coding retained_intron MGP_BALBcJ_T0078408.1 MGP_BALBcJ_G0030921.1 mouse_genomes_project 6 81665499 81665743 - Paip2b protein_coding retained_intron MGP_BALBcJ_T0010744.1 MGP_BALBcJ_G0008869.1 mouse_genomes_project 6 33573094 33573241 + Gm25111 miRNA miRNA MGP_BALBcJ_T0015508.1 MGP_BALBcJ_G0013605.1 mouse_genomes_project 6 107435506 107436131 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002096.1 MGP_BALBcJ_G0002009.1 mouse_genomes_project 6 98746239 98747764 - TEC TEC MGP_BALBcJ_T0015310.1 MGP_BALBcJ_G0013407.1 mouse_genomes_project 6 46096905 46098151 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002663.1 MGP_BALBcJ_G0002548.1 mouse_genomes_project 6 38163668 38164373 + MGP_BALBcJ_P0002663 Trbv20 TR_V_gene TR_V_gene MGP_BALBcJ_T0077066.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36281316 36324474 - MGP_BALBcJ_P0077066 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077067.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36282528 36324471 - MGP_BALBcJ_P0077067 Slc37a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077068.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36282529 36294235 - Slc37a3 protein_coding processed_transcript MGP_BALBcJ_T0077069.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36282532 36319729 - MGP_BALBcJ_P0077069 Slc37a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077070.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36283149 36293603 - Slc37a3 protein_coding processed_transcript MGP_BALBcJ_T0077071.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36290134 36293575 - Slc37a3 protein_coding retained_intron MGP_BALBcJ_T0077072.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36301225 36324458 - MGP_BALBcJ_P0077072 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077073.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36303707 36324471 - MGP_BALBcJ_P0077073 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077074.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36305891 36324446 - MGP_BALBcJ_P0077074 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077075.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36305916 36324435 - MGP_BALBcJ_P0077075 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077076.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36305918 36324461 - MGP_BALBcJ_P0077076 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077077.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36313334 36324456 - MGP_BALBcJ_P0077077 Slc37a3 protein_coding protein_coding MGP_BALBcJ_T0077078.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36314751 36324438 - Slc37a3 protein_coding processed_transcript MGP_BALBcJ_T0077079.1 MGP_BALBcJ_G0030578.1 mouse_genomes_project 6 36314760 36324417 - Slc37a3 protein_coding processed_transcript MGP_BALBcJ_T0001959.1 MGP_BALBcJ_G0001872.1 mouse_genomes_project 6 42250896 42254576 + TEC TEC MGP_BALBcJ_T0015219.1 MGP_BALBcJ_G0013316.1 mouse_genomes_project 6 5315834 5317081 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015377.1 MGP_BALBcJ_G0013474.1 mouse_genomes_project 6 63967330 63967979 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077789.1 MGP_BALBcJ_G0030784.1 mouse_genomes_project 6 54885603 54960523 + MGP_BALBcJ_P0077789 Herc6 protein_coding protein_coding MGP_BALBcJ_T0077790.1 MGP_BALBcJ_G0030784.1 mouse_genomes_project 6 54885611 54889190 + MGP_BALBcJ_P0077790 Herc6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077791.1 MGP_BALBcJ_G0030784.1 mouse_genomes_project 6 54905505 54927581 + Herc6 protein_coding retained_intron MGP_BALBcJ_T0077792.1 MGP_BALBcJ_G0030784.1 mouse_genomes_project 6 54907937 54912078 + Herc6 protein_coding retained_intron MGP_BALBcJ_T0077793.1 MGP_BALBcJ_G0030784.1 mouse_genomes_project 6 54908622 54918015 + Herc6 protein_coding retained_intron MGP_BALBcJ_T0077794.1 MGP_BALBcJ_G0030784.1 mouse_genomes_project 6 54912015 54919272 + Herc6 protein_coding retained_intron MGP_BALBcJ_T0002154.1 MGP_BALBcJ_G0002066.1 mouse_genomes_project 6 132887905 132888601 - TEC TEC MGP_BALBcJ_T0015403.1 MGP_BALBcJ_G0013500.1 mouse_genomes_project 6 66542275 66542727 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015639.1 MGP_BALBcJ_G0013736.1 mouse_genomes_project 6 139593752 139593958 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078521.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83788171 83791740 + Tprkb protein_coding processed_transcript MGP_BALBcJ_T0078522.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83788183 83804944 + MGP_BALBcJ_P0078522 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078523.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83788197 83792126 + Tprkb protein_coding processed_transcript MGP_BALBcJ_T0078524.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83788213 83800388 + Tprkb protein_coding processed_transcript MGP_BALBcJ_T0078525.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83790596 83792560 + Tprkb protein_coding retained_intron MGP_BALBcJ_T0078526.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792233 83803619 + MGP_BALBcJ_P0078526 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078527.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792252 83806295 + MGP_BALBcJ_P0078527 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078528.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792252 83804106 + MGP_BALBcJ_P0078528 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078529.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792261 83806293 + MGP_BALBcJ_P0078529 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078530.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792261 83804531 + MGP_BALBcJ_P0078530 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078531.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792269 83805036 + MGP_BALBcJ_P0078531 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078532.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792270 83800627 + Tprkb protein_coding processed_transcript MGP_BALBcJ_T0078533.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792271 83803902 + MGP_BALBcJ_P0078533 Tprkb protein_coding protein_coding MGP_BALBcJ_T0078534.1 MGP_BALBcJ_G0030946.1 mouse_genomes_project 6 83792312 83803951 + MGP_BALBcJ_P0078534 Tprkb protein_coding protein_coding MGP_BALBcJ_T0002657.1 MGP_BALBcJ_G0002542.1 mouse_genomes_project 6 38096414 38096853 + MGP_BALBcJ_P0002657 Trbv13-3 TR_V_gene TR_V_gene MGP_BALBcJ_T0005041.1 MGP_BALBcJ_G0004302.1 mouse_genomes_project 6 111665283 111666240 - Gm43964 antisense antisense MGP_BALBcJ_T0077193.1 MGP_BALBcJ_G0030620.1 mouse_genomes_project 6 38829069 38840494 + MGP_BALBcJ_P0077193 Sval2 protein_coding protein_coding MGP_BALBcJ_T0077194.1 MGP_BALBcJ_G0030620.1 mouse_genomes_project 6 38836319 38840453 + MGP_BALBcJ_P0077194 Sval2 protein_coding protein_coding MGP_BALBcJ_T0077195.1 MGP_BALBcJ_G0030620.1 mouse_genomes_project 6 38837872 38840453 + MGP_BALBcJ_P0077195 Sval2 protein_coding protein_coding MGP_BALBcJ_T0077196.1 MGP_BALBcJ_G0030620.1 mouse_genomes_project 6 38839420 38840370 + Sval2 protein_coding retained_intron MGP_BALBcJ_T0015431.1 MGP_BALBcJ_G0013528.1 mouse_genomes_project 6 79225418 79225871 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002059.1 MGP_BALBcJ_G0001972.1 mouse_genomes_project 6 85771003 85772090 + TEC TEC MGP_BALBcJ_T0004962.1 MGP_BALBcJ_G0004258.1 mouse_genomes_project 6 79854530 79856641 - Gm15864 antisense antisense MGP_BALBcJ_T0015206.1 MGP_BALBcJ_G0013303.1 mouse_genomes_project 6 1285967 1288956 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015406.1 MGP_BALBcJ_G0013503.1 mouse_genomes_project 6 67851032 67852022 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100020.1 MGP_BALBcJ_G0038056.1 mouse_genomes_project 6 95776833 95776926 + Gm24565 snRNA snRNA MGP_BALBcJ_T0079952.1 MGP_BALBcJ_G0031215.1 mouse_genomes_project 6 120976650 120993259 + MGP_BALBcJ_P0079952 Clec4a1 protein_coding protein_coding MGP_BALBcJ_T0080472.1 MGP_BALBcJ_G0031330.1 mouse_genomes_project 6 127801469 127809431 + MGP_BALBcJ_P0080472 Klre1 protein_coding protein_coding MGP_BALBcJ_T0080473.1 MGP_BALBcJ_G0031330.1 mouse_genomes_project 6 127801815 127809381 + MGP_BALBcJ_P0080473 Klre1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080474.1 MGP_BALBcJ_G0031330.1 mouse_genomes_project 6 127806975 127809428 + Klre1 protein_coding retained_intron MGP_BALBcJ_T0000272.1 MGP_BALBcJ_G0000213.1 mouse_genomes_project 6 65304111 65304364 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0078447.1 MGP_BALBcJ_G0030924.1 mouse_genomes_project 6 82420629 82437263 - MGP_BALBcJ_P0078447 Cyp26b1 protein_coding protein_coding MGP_BALBcJ_T0078448.1 MGP_BALBcJ_G0030924.1 mouse_genomes_project 6 82423455 82437232 - MGP_BALBcJ_P0078448 Cyp26b1 protein_coding protein_coding MGP_BALBcJ_T0015414.1 MGP_BALBcJ_G0013511.1 mouse_genomes_project 6 69833386 69833882 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008494.1 MGP_BALBcJ_G0006877.1 mouse_genomes_project 6 13794286 13800477 - Gm15473 lincRNA lincRNA MGP_BALBcJ_T0077318.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44629260 44638987 - MGP_BALBcJ_P0077318 Ezh2 protein_coding protein_coding MGP_BALBcJ_T0077319.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44629260 44694094 - MGP_BALBcJ_P0077319 Ezh2 protein_coding protein_coding MGP_BALBcJ_T0077320.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44629260 44694094 - MGP_BALBcJ_P0077320 Ezh2 protein_coding protein_coding MGP_BALBcJ_T0077321.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44629260 44694094 - MGP_BALBcJ_P0077321 Ezh2 protein_coding protein_coding MGP_BALBcJ_T0077322.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44629440 44631238 - Ezh2 protein_coding retained_intron MGP_BALBcJ_T0077323.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44629662 44676462 - MGP_BALBcJ_P0077323 Ezh2 protein_coding protein_coding MGP_BALBcJ_T0077324.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44631131 44634247 - Ezh2 protein_coding retained_intron MGP_BALBcJ_T0077325.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44631751 44638961 - Ezh2 protein_coding retained_intron MGP_BALBcJ_T0077326.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44632863 44644135 - Ezh2 protein_coding retained_intron MGP_BALBcJ_T0077327.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44639094 44650015 - MGP_BALBcJ_P0077327 Ezh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077328.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44642257 44650015 - MGP_BALBcJ_P0077328 Ezh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077329.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44644034 44652464 - MGP_BALBcJ_P0077329 Ezh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077330.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44644087 44694122 - MGP_BALBcJ_P0077330 Ezh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077331.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44650637 44694405 - MGP_BALBcJ_P0077331 Ezh2 protein_coding protein_coding MGP_BALBcJ_T0077332.1 MGP_BALBcJ_G0030664.1 mouse_genomes_project 6 44654275 44676809 - Ezh2 protein_coding processed_transcript MGP_BALBcJ_T0076782.1 MGP_BALBcJ_G0030524.1 mouse_genomes_project 6 27430827 27451624 + MGP_BALBcJ_P0076782 Cpa5 protein_coding protein_coding MGP_BALBcJ_T0076783.1 MGP_BALBcJ_G0030524.1 mouse_genomes_project 6 27430868 27451399 + MGP_BALBcJ_P0076783 Cpa5 protein_coding protein_coding MGP_BALBcJ_T0076784.1 MGP_BALBcJ_G0030524.1 mouse_genomes_project 6 27432005 27451622 + MGP_BALBcJ_P0076784 Cpa5 protein_coding protein_coding MGP_BALBcJ_T0076785.1 MGP_BALBcJ_G0030524.1 mouse_genomes_project 6 27432372 27451315 + MGP_BALBcJ_P0076785 Cpa5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076299.1 MGP_BALBcJ_G0030435.1 mouse_genomes_project 6 5658538 5662538 + Nxph1 protein_coding processed_transcript MGP_BALBcJ_T0076300.1 MGP_BALBcJ_G0030435.1 mouse_genomes_project 6 5658721 5969734 + MGP_BALBcJ_P0076300 Nxph1 protein_coding protein_coding MGP_BALBcJ_T0076301.1 MGP_BALBcJ_G0030435.1 mouse_genomes_project 6 5659783 5969732 + MGP_BALBcJ_P0076301 Nxph1 protein_coding protein_coding MGP_BALBcJ_T0015306.1 MGP_BALBcJ_G0013403.1 mouse_genomes_project 6 45787980 45788438 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077276.1 MGP_BALBcJ_G0030651.1 mouse_genomes_project 6 39945582 39946632 + MGP_BALBcJ_P0077276 Olfr444 protein_coding protein_coding MGP_BALBcJ_T0102607.1 MGP_BALBcJ_G0040423.1 mouse_genomes_project 6 39919456 39919770 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101922.1 MGP_BALBcJ_G0039801.1 mouse_genomes_project 6 40128935 40157210 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101923.1 MGP_BALBcJ_G0039801.1 mouse_genomes_project 6 40156060 40156975 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0076884.1 MGP_BALBcJ_G0030543.1 mouse_genomes_project 6 31347729 31375414 + MGP_BALBcJ_P0076884 Bpgm protein_coding protein_coding MGP_BALBcJ_T0076885.1 MGP_BALBcJ_G0030543.1 mouse_genomes_project 6 31347878 31360591 + Bpgm protein_coding retained_intron MGP_BALBcJ_T0076886.1 MGP_BALBcJ_G0030543.1 mouse_genomes_project 6 31347974 31359195 + MGP_BALBcJ_P0076886 Bpgm protein_coding protein_coding MGP_BALBcJ_T0076887.1 MGP_BALBcJ_G0030543.1 mouse_genomes_project 6 31348001 31359255 + MGP_BALBcJ_P0076887 Bpgm protein_coding protein_coding MGP_BALBcJ_T0076888.1 MGP_BALBcJ_G0030543.1 mouse_genomes_project 6 31348664 31359356 + MGP_BALBcJ_P0076888 Bpgm protein_coding protein_coding MGP_BALBcJ_T0002649.1 MGP_BALBcJ_G0002535.1 mouse_genomes_project 6 38014725 38015264 + MGP_BALBcJ_P0002649 Trbv3 TR_V_gene TR_V_gene MGP_BALBcJ_T0001940.1 MGP_BALBcJ_G0001853.1 mouse_genomes_project 6 27911178 27913272 - TEC TEC MGP_BALBcJ_T0002103.1 MGP_BALBcJ_G0002016.1 mouse_genomes_project 6 99428850 99429738 - TEC TEC MGP_BALBcJ_T0076492.1 MGP_BALBcJ_G0030467.1 mouse_genomes_project 6 19291735 19292721 + MGP_BALBcJ_P0076492 Vmn1r16 protein_coding protein_coding MGP_BALBcJ_T0080487.1 MGP_BALBcJ_G0031333.1 mouse_genomes_project 6 127861546 127865784 - MGP_BALBcJ_P0080487 Klrc3 protein_coding protein_coding MGP_BALBcJ_T0080488.1 MGP_BALBcJ_G0031333.1 mouse_genomes_project 6 127861546 127865784 - MGP_BALBcJ_P0080488 Klrc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080489.1 MGP_BALBcJ_G0031333.1 mouse_genomes_project 6 127861567 127865784 - MGP_BALBcJ_P0080489 Klrc3 protein_coding protein_coding MGP_BALBcJ_T0080978.1 MGP_BALBcJ_G0031461.1 mouse_genomes_project 6 144011811 144045679 - MGP_BALBcJ_P0080978 Kras protein_coding protein_coding MGP_BALBcJ_T0080979.1 MGP_BALBcJ_G0031461.1 mouse_genomes_project 6 144015114 144025967 - Kras protein_coding processed_transcript MGP_BALBcJ_T0080980.1 MGP_BALBcJ_G0031461.1 mouse_genomes_project 6 144015359 144045679 - MGP_BALBcJ_P0080980 Kras protein_coding protein_coding MGP_BALBcJ_T0080981.1 MGP_BALBcJ_G0031461.1 mouse_genomes_project 6 144015383 144045617 - MGP_BALBcJ_P0080981 Kras protein_coding protein_coding MGP_BALBcJ_T0080982.1 MGP_BALBcJ_G0031461.1 mouse_genomes_project 6 144015435 144045610 - MGP_BALBcJ_P0080982 Kras protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080983.1 MGP_BALBcJ_G0031461.1 mouse_genomes_project 6 144015750 144020697 - Kras protein_coding retained_intron MGP_BALBcJ_T0008484.1 MGP_BALBcJ_G0006869.1 mouse_genomes_project 6 4481106 4492031 + Gm44217 lincRNA lincRNA MGP_BALBcJ_T0015201.1 MGP_BALBcJ_G0013298.1 mouse_genomes_project 6 574469 574857 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0079587.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114321431 114372958 - MGP_BALBcJ_P0079587 Alox5 protein_coding protein_coding MGP_BALBcJ_T0079588.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114321628 114372911 - Alox5 protein_coding retained_intron MGP_BALBcJ_T0079589.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114321630 114324145 - Alox5 protein_coding retained_intron MGP_BALBcJ_T0079590.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114321961 114372804 - MGP_BALBcJ_P0079590 Alox5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079591.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114322073 114372804 - MGP_BALBcJ_P0079591 Alox5 protein_coding protein_coding MGP_BALBcJ_T0079592.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114322073 114372804 - MGP_BALBcJ_P0079592 Alox5 protein_coding protein_coding MGP_BALBcJ_T0079593.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114323943 114325373 - Alox5 protein_coding retained_intron MGP_BALBcJ_T0079594.1 MGP_BALBcJ_G0031147.1 mouse_genomes_project 6 114326822 114336178 - Alox5 protein_coding processed_transcript MGP_BALBcJ_T0079989.1 MGP_BALBcJ_G0031230.1 mouse_genomes_project 6 122372570 122382043 - MGP_BALBcJ_P0079989 1700013D24Rik protein_coding protein_coding MGP_BALBcJ_T0079990.1 MGP_BALBcJ_G0031230.1 mouse_genomes_project 6 122372575 122382026 - 1700013D24Rik protein_coding lincRNA MGP_BALBcJ_T0076245.1 MGP_BALBcJ_G0030422.1 mouse_genomes_project 6 3587801 3591800 + MGP_BALBcJ_P0076245 Dlx6 protein_coding protein_coding MGP_BALBcJ_T0076246.1 MGP_BALBcJ_G0030422.1 mouse_genomes_project 6 3588182 3591800 + MGP_BALBcJ_P0076246 Dlx6 protein_coding protein_coding MGP_BALBcJ_T0076247.1 MGP_BALBcJ_G0030422.1 mouse_genomes_project 6 3588268 3589901 + Dlx6 protein_coding retained_intron MGP_BALBcJ_T0079223.1 MGP_BALBcJ_G0031085.1 mouse_genomes_project 6 110293973 110350569 + MGP_BALBcJ_P0079223 Lmcd1 protein_coding protein_coding MGP_BALBcJ_T0015477.1 MGP_BALBcJ_G0013574.1 mouse_genomes_project 6 94073998 94074365 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002105.1 MGP_BALBcJ_G0002018.1 mouse_genomes_project 6 99977496 99980163 + TEC TEC MGP_BALBcJ_T0015520.1 MGP_BALBcJ_G0013617.1 mouse_genomes_project 6 111587641 111587866 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005009.1 MGP_BALBcJ_G0004283.1 mouse_genomes_project 6 87273684 87296675 + Gm26811 antisense antisense MGP_BALBcJ_T0080186.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123175297 123211092 + MGP_BALBcJ_P0080186 Chd4 protein_coding protein_coding MGP_BALBcJ_T0080187.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123175297 123211098 + MGP_BALBcJ_P0080187 Chd4 protein_coding protein_coding MGP_BALBcJ_T0080188.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123175478 123211098 + MGP_BALBcJ_P0080188 Chd4 protein_coding protein_coding MGP_BALBcJ_T0080189.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123175493 123176687 + Chd4 protein_coding retained_intron MGP_BALBcJ_T0080190.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123175884 123179820 + MGP_BALBcJ_P0080190 Chd4 protein_coding protein_coding MGP_BALBcJ_T0080191.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123192471 123193552 + Chd4 protein_coding retained_intron MGP_BALBcJ_T0080192.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123192499 123200840 + MGP_BALBcJ_P0080192 Chd4 protein_coding protein_coding MGP_BALBcJ_T0080193.1 MGP_BALBcJ_G0031263.1 mouse_genomes_project 6 123198659 123199763 + Chd4 protein_coding retained_intron MGP_BALBcJ_T0000146.1 MGP_BALBcJ_G0000112.1 mouse_genomes_project 6 66019640 66020126 + MGP_BALBcJ_P0000146 Igkv15-103 IG_V_gene IG_V_gene MGP_BALBcJ_T0078301.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80948020 80962156 + MGP_BALBcJ_P0078301 Rtkn protein_coding protein_coding MGP_BALBcJ_T0078302.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80948369 80965159 + MGP_BALBcJ_P0078302 Rtkn protein_coding protein_coding MGP_BALBcJ_T0078303.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80949610 80965159 + MGP_BALBcJ_P0078303 Rtkn protein_coding protein_coding MGP_BALBcJ_T0078304.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80949631 80965159 + MGP_BALBcJ_P0078304 Rtkn protein_coding protein_coding MGP_BALBcJ_T0078305.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80955006 80960752 + MGP_BALBcJ_P0078305 Rtkn protein_coding protein_coding MGP_BALBcJ_T0078306.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80955178 80960274 + MGP_BALBcJ_P0078306 Rtkn protein_coding protein_coding MGP_BALBcJ_T0078307.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80960433 80962838 + Rtkn protein_coding retained_intron MGP_BALBcJ_T0078309.1 MGP_BALBcJ_G0030902.1 mouse_genomes_project 6 80963334 80964788 + Rtkn protein_coding retained_intron MGP_BALBcJ_T0080183.1 MGP_BALBcJ_G0031262.1 mouse_genomes_project 6 123147752 123162285 + MGP_BALBcJ_P0080183 Lpar5 protein_coding protein_coding MGP_BALBcJ_T0080184.1 MGP_BALBcJ_G0031262.1 mouse_genomes_project 6 123151106 123161621 + MGP_BALBcJ_P0080184 Lpar5 protein_coding protein_coding MGP_BALBcJ_T0080185.1 MGP_BALBcJ_G0031262.1 mouse_genomes_project 6 123151106 123162285 + MGP_BALBcJ_P0080185 Lpar5 protein_coding protein_coding MGP_BALBcJ_T0015469.1 MGP_BALBcJ_G0013566.1 mouse_genomes_project 6 92407052 92407443 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004952.1 MGP_BALBcJ_G0004251.1 mouse_genomes_project 6 69706699 69709330 - Gm26628 antisense antisense MGP_BALBcJ_T0079244.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111064750 111087376 + MGP_BALBcJ_P0079244 Thumpd3 protein_coding protein_coding MGP_BALBcJ_T0079245.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111064827 111074876 + MGP_BALBcJ_P0079245 Thumpd3 protein_coding protein_coding MGP_BALBcJ_T0079246.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111064840 111079900 + Thumpd3 protein_coding retained_intron MGP_BALBcJ_T0079247.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111064852 111068068 + Thumpd3 protein_coding retained_intron MGP_BALBcJ_T0079248.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111064882 111066544 + Thumpd3 protein_coding retained_intron MGP_BALBcJ_T0079249.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111064983 111066204 + MGP_BALBcJ_P0079249 Thumpd3 protein_coding protein_coding MGP_BALBcJ_T0079250.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111065280 111066230 + MGP_BALBcJ_P0079250 Thumpd3 protein_coding protein_coding MGP_BALBcJ_T0079251.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111065940 111069534 + Thumpd3 protein_coding processed_transcript MGP_BALBcJ_T0079252.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111076651 111080124 + Thumpd3 protein_coding retained_intron MGP_BALBcJ_T0079253.1 MGP_BALBcJ_G0031091.1 mouse_genomes_project 6 111084528 111086999 + Thumpd3 protein_coding retained_intron MGP_BALBcJ_T0018185.1 MGP_BALBcJ_G0015561.1 mouse_genomes_project 6 42855 50780 - processed_transcript lincRNA MGP_BALBcJ_T0018186.1 MGP_BALBcJ_G0015561.1 mouse_genomes_project 6 45231 50819 - processed_transcript lincRNA MGP_BALBcJ_T0018187.1 MGP_BALBcJ_G0015561.1 mouse_genomes_project 6 45530 50851 - processed_transcript retained_intron MGP_BALBcJ_T0078673.1 MGP_BALBcJ_G0030972.1 mouse_genomes_project 6 85374797 85414625 - Arhgap25 protein_coding retained_intron MGP_BALBcJ_T0078674.1 MGP_BALBcJ_G0030972.1 mouse_genomes_project 6 85374797 85452190 - MGP_BALBcJ_P0078674 Arhgap25 protein_coding protein_coding MGP_BALBcJ_T0078675.1 MGP_BALBcJ_G0030972.1 mouse_genomes_project 6 85375655 85414561 - MGP_BALBcJ_P0078675 Arhgap25 protein_coding protein_coding MGP_BALBcJ_T0078676.1 MGP_BALBcJ_G0030972.1 mouse_genomes_project 6 85376379 85379903 - Arhgap25 protein_coding retained_intron MGP_BALBcJ_T0008762.1 MGP_BALBcJ_G0007074.1 mouse_genomes_project 6 146481741 146484785 - lincRNA lincRNA MGP_BALBcJ_T0077118.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37286178 37358290 + MGP_BALBcJ_P0077118 protein_coding unknown_likely_coding MGP_BALBcJ_T0077119.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37286221 37330284 + protein_coding retained_intron MGP_BALBcJ_T0077120.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37286223 37287504 + protein_coding retained_intron MGP_BALBcJ_T0077121.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37286244 37310565 + protein_coding retained_intron MGP_BALBcJ_T0077122.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37290610 37309214 + protein_coding processed_transcript MGP_BALBcJ_T0077123.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37290610 37318644 + MGP_BALBcJ_P0077123 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077124.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37311109 37314111 + protein_coding retained_intron MGP_BALBcJ_T0077125.1 MGP_BALBcJ_G0030588.1 mouse_genomes_project 6 37337423 37357896 + protein_coding retained_intron MGP_BALBcJ_T0008578.1 MGP_BALBcJ_G0006933.1 mouse_genomes_project 6 48882436 48899221 - Gm44191 lincRNA lincRNA MGP_BALBcJ_T0008744.1 MGP_BALBcJ_G0007063.1 mouse_genomes_project 6 142037175 142086815 + D6Ertd474e lincRNA lincRNA MGP_BALBcJ_T0008745.1 MGP_BALBcJ_G0007063.1 mouse_genomes_project 6 142037175 142040400 + D6Ertd474e lincRNA lincRNA MGP_BALBcJ_T0008746.1 MGP_BALBcJ_G0007063.1 mouse_genomes_project 6 142037180 142087180 + D6Ertd474e lincRNA lincRNA MGP_BALBcJ_T0008747.1 MGP_BALBcJ_G0007063.1 mouse_genomes_project 6 142037180 142088379 + D6Ertd474e lincRNA lincRNA MGP_BALBcJ_T0008748.1 MGP_BALBcJ_G0007063.1 mouse_genomes_project 6 142077171 142087144 + D6Ertd474e lincRNA lincRNA MGP_BALBcJ_T0008724.1 MGP_BALBcJ_G0007049.1 mouse_genomes_project 6 133047000 133067495 - Gm44448 lincRNA lincRNA MGP_BALBcJ_T0002039.1 MGP_BALBcJ_G0001952.1 mouse_genomes_project 6 81705489 81707712 + TEC TEC MGP_BALBcJ_T0078282.1 MGP_BALBcJ_G0030897.1 mouse_genomes_project 6 80905746 80913979 + MGP_BALBcJ_P0078282 Gm42688 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015456.1 MGP_BALBcJ_G0013553.1 mouse_genomes_project 6 85281954 85282277 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080355.1 MGP_BALBcJ_G0031299.1 mouse_genomes_project 6 126475534 126481355 - MGP_BALBcJ_P0080355 protein_coding protein_coding MGP_BALBcJ_T0080356.1 MGP_BALBcJ_G0031299.1 mouse_genomes_project 6 126475894 126481411 - MGP_BALBcJ_P0080356 protein_coding protein_coding MGP_BALBcJ_T0080357.1 MGP_BALBcJ_G0031299.1 mouse_genomes_project 6 126475899 126481411 - MGP_BALBcJ_P0080357 protein_coding protein_coding MGP_BALBcJ_T0080358.1 MGP_BALBcJ_G0031299.1 mouse_genomes_project 6 126476505 126481121 - MGP_BALBcJ_P0080358 protein_coding protein_coding MGP_BALBcJ_T0080359.1 MGP_BALBcJ_G0031299.1 mouse_genomes_project 6 126477755 126481238 - MGP_BALBcJ_P0080359 protein_coding protein_coding MGP_BALBcJ_T0080360.1 MGP_BALBcJ_G0031299.1 mouse_genomes_project 6 126480422 126481454 - protein_coding processed_transcript MGP_BALBcJ_T0101304.1 MGP_BALBcJ_G0039340.1 mouse_genomes_project 6 144169901 144169988 + Gm23498 snoRNA snoRNA MGP_BALBcJ_T0078380.1 MGP_BALBcJ_G0030915.1 mouse_genomes_project 6 81496430 81503096 - MGP_BALBcJ_P0078380 Cd207 protein_coding protein_coding MGP_BALBcJ_T0077167.1 MGP_BALBcJ_G0030607.1 mouse_genomes_project 6 38281464 38287776 - MGP_BALBcJ_P0077167 protein_coding protein_coding MGP_BALBcJ_T0080847.1 MGP_BALBcJ_G0031439.1 mouse_genomes_project 6 140768996 140808751 - MGP_BALBcJ_P0080847 Gm6614 protein_coding protein_coding MGP_BALBcJ_T0080848.1 MGP_BALBcJ_G0031439.1 mouse_genomes_project 6 140768996 140808751 - MGP_BALBcJ_P0080848 Gm6614 protein_coding protein_coding MGP_BALBcJ_T0080849.1 MGP_BALBcJ_G0031439.1 mouse_genomes_project 6 140769347 140806082 - MGP_BALBcJ_P0080849 Gm6614 protein_coding protein_coding MGP_BALBcJ_T0078572.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314383 84341468 + MGP_BALBcJ_P0078572 Tia1 protein_coding protein_coding MGP_BALBcJ_T0078573.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314383 84343672 + MGP_BALBcJ_P0078573 Tia1 protein_coding protein_coding MGP_BALBcJ_T0078574.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314399 84315333 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078575.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314446 84317269 + Tia1 protein_coding processed_transcript MGP_BALBcJ_T0078576.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314455 84328306 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078577.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314460 84330109 + Tia1 protein_coding processed_transcript MGP_BALBcJ_T0078578.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314460 84338054 + MGP_BALBcJ_P0078578 Tia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078579.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314468 84341039 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078580.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314477 84342452 + MGP_BALBcJ_P0078580 Tia1 protein_coding protein_coding MGP_BALBcJ_T0078581.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314478 84341038 + MGP_BALBcJ_P0078581 Tia1 protein_coding protein_coding MGP_BALBcJ_T0078582.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314481 84338109 + MGP_BALBcJ_P0078582 Tia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078583.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314487 84334164 + Tia1 protein_coding processed_transcript MGP_BALBcJ_T0078584.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314489 84343494 + MGP_BALBcJ_P0078584 Tia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078585.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314500 84330155 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078586.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314500 84342447 + MGP_BALBcJ_P0078586 Tia1 protein_coding protein_coding MGP_BALBcJ_T0078587.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314524 84330190 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078588.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84314637 84335587 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078589.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84324141 84332421 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078590.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84326105 84328765 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078591.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84329519 84333916 + Tia1 protein_coding processed_transcript MGP_BALBcJ_T0078592.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84329711 84335811 + Tia1 protein_coding processed_transcript MGP_BALBcJ_T0078593.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84330211 84334150 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078594.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84330243 84334724 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078595.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84330570 84338071 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078596.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84332295 84334935 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078597.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84334129 84335295 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078598.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84335301 84336001 + Tia1 protein_coding retained_intron MGP_BALBcJ_T0078599.1 MGP_BALBcJ_G0030954.1 mouse_genomes_project 6 84335776 84340569 + MGP_BALBcJ_P0078599 Tia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005095.1 MGP_BALBcJ_G0004350.1 mouse_genomes_project 6 143277198 143299656 + Sox5os2 antisense antisense MGP_BALBcJ_T0077991.1 MGP_BALBcJ_G0030840.1 mouse_genomes_project 6 69240566 69257860 + MGP_BALBcJ_P0077991 Rnf103 protein_coding protein_coding MGP_BALBcJ_T0077992.1 MGP_BALBcJ_G0030840.1 mouse_genomes_project 6 69240582 69257860 + MGP_BALBcJ_P0077992 Rnf103 protein_coding protein_coding MGP_BALBcJ_T0077993.1 MGP_BALBcJ_G0030840.1 mouse_genomes_project 6 69240675 69257742 + MGP_BALBcJ_P0077993 Rnf103 protein_coding protein_coding MGP_BALBcJ_T0077994.1 MGP_BALBcJ_G0030840.1 mouse_genomes_project 6 69250556 69253827 + Rnf103 protein_coding retained_intron MGP_BALBcJ_T0077045.1 MGP_BALBcJ_G0030572.1 mouse_genomes_project 6 35554501 35567087 - MGP_BALBcJ_P0077045 Klrg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077046.1 MGP_BALBcJ_G0030572.1 mouse_genomes_project 6 35555468 35567087 - MGP_BALBcJ_P0077046 Klrg2 protein_coding protein_coding MGP_BALBcJ_T0077047.1 MGP_BALBcJ_G0030572.1 mouse_genomes_project 6 35556069 35567096 - MGP_BALBcJ_P0077047 Klrg2 protein_coding protein_coding MGP_BALBcJ_T0000174.1 MGP_BALBcJ_G0000133.1 mouse_genomes_project 6 67607309 67607863 - MGP_BALBcJ_P0000174 Igkv5-39 IG_V_gene IG_V_gene MGP_BALBcJ_T0000175.1 MGP_BALBcJ_G0000133.1 mouse_genomes_project 6 67607309 67607596 - MGP_BALBcJ_P0000175 Igkv5-39 IG_V_gene IG_V_gene MGP_BALBcJ_T0010768.1 MGP_BALBcJ_G0008893.1 mouse_genomes_project 6 85911447 85911575 - miRNA miRNA MGP_BALBcJ_T0078893.1 MGP_BALBcJ_G0031020.1 mouse_genomes_project 6 88590774 88632479 + MGP_BALBcJ_P0078893 Slc41a3 protein_coding protein_coding MGP_BALBcJ_T0078894.1 MGP_BALBcJ_G0031020.1 mouse_genomes_project 6 88605253 88632479 + MGP_BALBcJ_P0078894 Slc41a3 protein_coding protein_coding MGP_BALBcJ_T0102632.1 MGP_BALBcJ_G0040448.1 mouse_genomes_project 6 83524585 83661976 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015573.1 MGP_BALBcJ_G0013670.1 mouse_genomes_project 6 125075106 125075384 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004903.1 MGP_BALBcJ_G0004212.1 mouse_genomes_project 6 29321816 29326320 + Plxna4os1 antisense antisense MGP_BALBcJ_T0008531.1 MGP_BALBcJ_G0006901.1 mouse_genomes_project 6 28597727 28722958 + Gm13849 lincRNA lincRNA MGP_BALBcJ_T0077145.1 MGP_BALBcJ_G0030596.1 mouse_genomes_project 6 37531638 37532699 + MGP_BALBcJ_P0077145 Olfr460 protein_coding protein_coding MGP_BALBcJ_T0077637.1 MGP_BALBcJ_G0030738.1 mouse_genomes_project 6 51081812 51187975 - MGP_BALBcJ_P0077637 Cpvl protein_coding protein_coding MGP_BALBcJ_T0077638.1 MGP_BALBcJ_G0030738.1 mouse_genomes_project 6 51081912 51187966 - MGP_BALBcJ_P0077638 Cpvl protein_coding protein_coding MGP_BALBcJ_T0077639.1 MGP_BALBcJ_G0030738.1 mouse_genomes_project 6 51081912 51187966 - MGP_BALBcJ_P0077639 Cpvl protein_coding protein_coding MGP_BALBcJ_T0008699.1 MGP_BALBcJ_G0007029.1 mouse_genomes_project 6 118469732 118477715 + 1700072O05Rik lincRNA lincRNA MGP_BALBcJ_T0008749.1 MGP_BALBcJ_G0007064.1 mouse_genomes_project 6 142323006 142324550 - 4930579D09Rik lincRNA lincRNA MGP_BALBcJ_T0002167.1 MGP_BALBcJ_G0002079.1 mouse_genomes_project 6 139419734 139421996 - TEC TEC MGP_BALBcJ_T0101237.1 MGP_BALBcJ_G0039273.1 mouse_genomes_project 6 9789768 9789897 + Gm24985 snoRNA snoRNA MGP_BALBcJ_T0010764.1 MGP_BALBcJ_G0008889.1 mouse_genomes_project 6 81220497 81220604 - Mir6374 miRNA miRNA MGP_BALBcJ_T0076610.1 MGP_BALBcJ_G0030498.1 mouse_genomes_project 6 25959824 25969150 - MGP_BALBcJ_P0076610 Prrt4 protein_coding unknown_likely_coding MGP_BALBcJ_T0080313.1 MGP_BALBcJ_G0031290.1 mouse_genomes_project 6 125168734 125187996 - MGP_BALBcJ_P0080313 Tigar protein_coding protein_coding MGP_BALBcJ_T0080314.1 MGP_BALBcJ_G0031290.1 mouse_genomes_project 6 125171476 125188003 - MGP_BALBcJ_P0080314 Tigar protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010793.1 MGP_BALBcJ_G0008918.1 mouse_genomes_project 6 123176339 123176402 + Mir7045 miRNA miRNA MGP_BALBcJ_T0080121.1 MGP_BALBcJ_G0031254.1 mouse_genomes_project 6 122990919 122998362 - MGP_BALBcJ_P0080121 Lag3 protein_coding protein_coding MGP_BALBcJ_T0080122.1 MGP_BALBcJ_G0031254.1 mouse_genomes_project 6 122995181 122996632 - Lag3 protein_coding processed_transcript MGP_BALBcJ_T0015416.1 MGP_BALBcJ_G0013513.1 mouse_genomes_project 6 71066973 71067397 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100040.1 MGP_BALBcJ_G0038076.1 mouse_genomes_project 6 128602559 128602624 + Gm22555 snRNA snRNA MGP_BALBcJ_T0015589.1 MGP_BALBcJ_G0013686.1 mouse_genomes_project 6 126908749 126908866 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002100.1 MGP_BALBcJ_G0002013.1 mouse_genomes_project 6 99363744 99366429 - TEC TEC MGP_BALBcJ_T0080415.1 MGP_BALBcJ_G0031313.1 mouse_genomes_project 6 126986528 127000579 - MGP_BALBcJ_P0080415 protein_coding protein_coding MGP_BALBcJ_T0080416.1 MGP_BALBcJ_G0031313.1 mouse_genomes_project 6 126987197 127000561 - MGP_BALBcJ_P0080416 protein_coding protein_coding MGP_BALBcJ_T0080417.1 MGP_BALBcJ_G0031313.1 mouse_genomes_project 6 126987716 127000538 - MGP_BALBcJ_P0080417 protein_coding protein_coding MGP_BALBcJ_T0080418.1 MGP_BALBcJ_G0031313.1 mouse_genomes_project 6 126992994 127000553 - MGP_BALBcJ_P0080418 protein_coding protein_coding MGP_BALBcJ_T0078991.1 MGP_BALBcJ_G0031037.1 mouse_genomes_project 6 90212226 90241668 - MGP_BALBcJ_P0078991 Rbsn protein_coding protein_coding MGP_BALBcJ_T0078992.1 MGP_BALBcJ_G0031037.1 mouse_genomes_project 6 90215355 90225237 - MGP_BALBcJ_P0078992 Rbsn protein_coding protein_coding MGP_BALBcJ_T0078993.1 MGP_BALBcJ_G0031037.1 mouse_genomes_project 6 90215897 90227140 - Rbsn protein_coding processed_transcript MGP_BALBcJ_T0078994.1 MGP_BALBcJ_G0031037.1 mouse_genomes_project 6 90216260 90219643 - Rbsn protein_coding retained_intron MGP_BALBcJ_T0078995.1 MGP_BALBcJ_G0031037.1 mouse_genomes_project 6 90233959 90241592 - MGP_BALBcJ_P0078995 Rbsn protein_coding protein_coding MGP_BALBcJ_T0078996.1 MGP_BALBcJ_G0031037.1 mouse_genomes_project 6 90238388 90241312 - MGP_BALBcJ_P0078996 Rbsn protein_coding protein_coding MGP_BALBcJ_T0078462.1 MGP_BALBcJ_G0030928.1 mouse_genomes_project 6 83038321 83055607 + MGP_BALBcJ_P0078462 Emx1 protein_coding protein_coding MGP_BALBcJ_T0078463.1 MGP_BALBcJ_G0030928.1 mouse_genomes_project 6 83044777 83055711 + Emx1 protein_coding retained_intron MGP_BALBcJ_T0008715.1 MGP_BALBcJ_G0007045.1 mouse_genomes_project 6 127017923 127020898 + Gm26656 lincRNA lincRNA MGP_BALBcJ_T0000171.1 MGP_BALBcJ_G0000130.1 mouse_genomes_project 6 67441006 67441506 - MGP_BALBcJ_P0000171 Igkv12-46 IG_V_gene IG_V_gene MGP_BALBcJ_T0101262.1 MGP_BALBcJ_G0039298.1 mouse_genomes_project 6 65342670 65342808 - Gm22425 snoRNA snoRNA MGP_BALBcJ_T0001915.1 MGP_BALBcJ_G0001828.1 mouse_genomes_project 6 4108751 4111429 + TEC TEC MGP_BALBcJ_T0005075.1 MGP_BALBcJ_G0004332.1 mouse_genomes_project 6 127148709 127167256 - Gm15987 antisense antisense MGP_BALBcJ_T0100036.1 MGP_BALBcJ_G0038072.1 mouse_genomes_project 6 127381547 127381610 + Gm26160 snRNA snRNA MGP_BALBcJ_T0001994.1 MGP_BALBcJ_G0001907.1 mouse_genomes_project 6 58285690 58289718 - TEC TEC MGP_BALBcJ_T0011610.1 MGP_BALBcJ_G0009735.1 mouse_genomes_project 6 14658448 14658568 + Gm27402 misc_RNA misc_RNA MGP_BALBcJ_T0079383.1 MGP_BALBcJ_G0031112.1 mouse_genomes_project 6 111628781 111640960 + MGP_BALBcJ_P0079383 Brk1 protein_coding protein_coding MGP_BALBcJ_T0002135.1 MGP_BALBcJ_G0002047.1 mouse_genomes_project 6 123163249 123163842 + TEC TEC MGP_BALBcJ_T0076141.1 MGP_BALBcJ_G0030401.1 mouse_genomes_project 6 69449 109842 - MGP_BALBcJ_P0076141 Samd9l protein_coding protein_coding MGP_BALBcJ_T0076142.1 MGP_BALBcJ_G0030401.1 mouse_genomes_project 6 74142 91309 - MGP_BALBcJ_P0076142 Samd9l protein_coding protein_coding MGP_BALBcJ_T0078692.1 MGP_BALBcJ_G0030978.1 mouse_genomes_project 6 85708426 85755538 - MGP_BALBcJ_P0078692 Gm45140 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078696.1 MGP_BALBcJ_G0030978.1 mouse_genomes_project 6 85711914 85741316 - MGP_BALBcJ_P0078696 Gm45140 protein_coding protein_coding MGP_BALBcJ_T0000045.1 MGP_BALBcJ_G0000037.1 mouse_genomes_project 6 68453234 68453272 + MGP_BALBcJ_P0000045 Igkj1 IG_J_gene IG_J_gene MGP_BALBcJ_T0079886.1 MGP_BALBcJ_G0031202.1 mouse_genomes_project 6 120328176 120335766 + MGP_BALBcJ_P0079886 M6pr protein_coding unknown_likely_coding MGP_BALBcJ_T0079887.1 MGP_BALBcJ_G0031202.1 mouse_genomes_project 6 120328302 120335838 + M6pr protein_coding retained_intron MGP_BALBcJ_T0077557.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48707324 48776423 + MGP_BALBcJ_P0077557 Snx10 protein_coding protein_coding MGP_BALBcJ_T0077558.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48707405 48754582 + Snx10 protein_coding retained_intron MGP_BALBcJ_T0077559.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48707681 48765180 + MGP_BALBcJ_P0077559 Snx10 protein_coding protein_coding MGP_BALBcJ_T0077560.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48707706 48774180 + MGP_BALBcJ_P0077560 Snx10 protein_coding protein_coding MGP_BALBcJ_T0077561.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48728772 48776414 + MGP_BALBcJ_P0077561 Snx10 protein_coding protein_coding MGP_BALBcJ_T0077562.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48728773 48774816 + MGP_BALBcJ_P0077562 Snx10 protein_coding protein_coding MGP_BALBcJ_T0077563.1 MGP_BALBcJ_G0030717.1 mouse_genomes_project 6 48728815 48774787 + MGP_BALBcJ_P0077563 Snx10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077402.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45714731 45719941 + MGP_BALBcJ_P0077402 Repin1 protein_coding protein_coding MGP_BALBcJ_T0077403.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45714731 45719941 + MGP_BALBcJ_P0077403 Repin1 protein_coding protein_coding MGP_BALBcJ_T0077404.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45714731 45718249 + MGP_BALBcJ_P0077404 Repin1 protein_coding protein_coding MGP_BALBcJ_T0077405.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45714739 45719942 + MGP_BALBcJ_P0077405 Repin1 protein_coding protein_coding MGP_BALBcJ_T0077406.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45714748 45719941 + MGP_BALBcJ_P0077406 Repin1 protein_coding protein_coding MGP_BALBcJ_T0077407.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45714788 45716180 + Repin1 protein_coding retained_intron MGP_BALBcJ_T0077410.1 MGP_BALBcJ_G0030681.1 mouse_genomes_project 6 45715165 45717485 + Repin1 protein_coding retained_intron MGP_BALBcJ_T0080840.1 MGP_BALBcJ_G0031437.1 mouse_genomes_project 6 140599341 140652749 - MGP_BALBcJ_P0080840 Slco1a4 protein_coding protein_coding MGP_BALBcJ_T0080841.1 MGP_BALBcJ_G0031437.1 mouse_genomes_project 6 140600623 140642046 - MGP_BALBcJ_P0080841 Slco1a4 protein_coding protein_coding MGP_BALBcJ_T0080842.1 MGP_BALBcJ_G0031437.1 mouse_genomes_project 6 140630915 140652777 - MGP_BALBcJ_P0080842 Slco1a4 protein_coding protein_coding MGP_BALBcJ_T0080843.1 MGP_BALBcJ_G0031437.1 mouse_genomes_project 6 140647587 140650260 - Slco1a4 protein_coding retained_intron MGP_BALBcJ_T0079043.1 MGP_BALBcJ_G0031049.1 mouse_genomes_project 6 94155333 94703968 + MGP_BALBcJ_P0079043 Fam19a1 protein_coding protein_coding MGP_BALBcJ_T0079044.1 MGP_BALBcJ_G0031049.1 mouse_genomes_project 6 94155421 94174292 + Fam19a1 protein_coding processed_transcript MGP_BALBcJ_T0079045.1 MGP_BALBcJ_G0031049.1 mouse_genomes_project 6 94156832 94158101 + Fam19a1 protein_coding processed_transcript MGP_BALBcJ_T0079046.1 MGP_BALBcJ_G0031049.1 mouse_genomes_project 6 94157494 94703235 + MGP_BALBcJ_P0079046 Fam19a1 protein_coding protein_coding MGP_BALBcJ_T0076264.1 MGP_BALBcJ_G0030427.1 mouse_genomes_project 6 4563094 4594519 + MGP_BALBcJ_P0076264 C1galt1 protein_coding protein_coding MGP_BALBcJ_T0079384.1 MGP_BALBcJ_G0031113.1 mouse_genomes_project 6 111647999 111655603 + MGP_BALBcJ_P0079384 Vhl protein_coding protein_coding MGP_BALBcJ_T0079385.1 MGP_BALBcJ_G0031113.1 mouse_genomes_project 6 111648761 111653731 + Vhl protein_coding processed_transcript MGP_BALBcJ_T0079386.1 MGP_BALBcJ_G0031113.1 mouse_genomes_project 6 111648969 111653527 + Vhl protein_coding processed_transcript MGP_BALBcJ_T0079387.1 MGP_BALBcJ_G0031113.1 mouse_genomes_project 6 111653476 111655597 + MGP_BALBcJ_P0079387 Vhl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015497.1 MGP_BALBcJ_G0013594.1 mouse_genomes_project 6 102348455 102348907 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010746.1 MGP_BALBcJ_G0008871.1 mouse_genomes_project 6 44909320 44909397 - Mir704 miRNA miRNA MGP_BALBcJ_T0001970.1 MGP_BALBcJ_G0001883.1 mouse_genomes_project 6 43122378 43124608 + TEC TEC MGP_BALBcJ_T0001954.1 MGP_BALBcJ_G0001867.1 mouse_genomes_project 6 40352772 40353400 + TEC TEC MGP_BALBcJ_T0015368.1 MGP_BALBcJ_G0013465.1 mouse_genomes_project 6 62885103 62886706 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005089.1 MGP_BALBcJ_G0004344.1 mouse_genomes_project 6 137249620 137266795 + Gm30332 antisense antisense MGP_BALBcJ_T0079986.1 MGP_BALBcJ_G0031229.1 mouse_genomes_project 6 122329067 122356444 + MGP_BALBcJ_P0079986 Cd163 protein_coding protein_coding MGP_BALBcJ_T0079987.1 MGP_BALBcJ_G0031229.1 mouse_genomes_project 6 122329111 122356444 + MGP_BALBcJ_P0079987 Cd163 protein_coding protein_coding MGP_BALBcJ_T0079988.1 MGP_BALBcJ_G0031229.1 mouse_genomes_project 6 122346358 122356436 + Cd163 protein_coding retained_intron MGP_BALBcJ_T0008711.1 MGP_BALBcJ_G0007041.1 mouse_genomes_project 6 126268862 126283237 - 9330102E08Rik lincRNA lincRNA MGP_BALBcJ_T0015432.1 MGP_BALBcJ_G0013529.1 mouse_genomes_project 6 79646268 79646959 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015545.1 MGP_BALBcJ_G0013642.1 mouse_genomes_project 6 119460819 119461144 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080544.1 MGP_BALBcJ_G0031362.1 mouse_genomes_project 6 130802214 130805411 - MGP_BALBcJ_P0080544 Gm8882 protein_coding protein_coding MGP_BALBcJ_T0000158.1 MGP_BALBcJ_G0000120.1 mouse_genomes_project 6 66361490 66361974 - MGP_BALBcJ_P0000158 Igkv19-93 IG_V_gene IG_V_gene MGP_BALBcJ_T0000159.1 MGP_BALBcJ_G0000120.1 mouse_genomes_project 6 66361490 66361958 - MGP_BALBcJ_P0000159 Igkv19-93 IG_V_gene IG_V_gene MGP_BALBcJ_T0015239.1 MGP_BALBcJ_G0013336.1 mouse_genomes_project 6 14890659 14893312 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0001981.1 MGP_BALBcJ_G0001894.1 mouse_genomes_project 6 49495841 49496569 + TEC TEC MGP_BALBcJ_T0077957.1 MGP_BALBcJ_G0030828.1 mouse_genomes_project 6 64992435 64994170 - MGP_BALBcJ_P0077957 Tacstd2 protein_coding protein_coding MGP_BALBcJ_T0015576.1 MGP_BALBcJ_G0013673.1 mouse_genomes_project 6 125311850 125312708 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015615.1 MGP_BALBcJ_G0013712.1 mouse_genomes_project 6 130857204 130857637 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002161.1 MGP_BALBcJ_G0002073.1 mouse_genomes_project 6 136386847 136388450 - TEC TEC MGP_BALBcJ_T0077338.1 MGP_BALBcJ_G0030667.1 mouse_genomes_project 6 44942579 44950635 + Zfp398 protein_coding retained_intron MGP_BALBcJ_T0077339.1 MGP_BALBcJ_G0030667.1 mouse_genomes_project 6 44942582 44968802 + MGP_BALBcJ_P0077339 Zfp398 protein_coding protein_coding MGP_BALBcJ_T0077340.1 MGP_BALBcJ_G0030667.1 mouse_genomes_project 6 44942613 44974638 + MGP_BALBcJ_P0077340 Zfp398 protein_coding protein_coding MGP_BALBcJ_T0015630.1 MGP_BALBcJ_G0013727.1 mouse_genomes_project 6 135203707 135204101 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0078229.1 MGP_BALBcJ_G0030887.1 mouse_genomes_project 6 80749607 80833285 + MGP_BALBcJ_P0078229 M1ap protein_coding protein_coding MGP_BALBcJ_T0078230.1 MGP_BALBcJ_G0030887.1 mouse_genomes_project 6 80829445 80833411 + MGP_BALBcJ_P0078230 M1ap protein_coding protein_coding MGP_BALBcJ_T0078231.1 MGP_BALBcJ_G0030887.1 mouse_genomes_project 6 80831363 80832925 + M1ap protein_coding retained_intron MGP_BALBcJ_T0008620.1 MGP_BALBcJ_G0006969.1 mouse_genomes_project 6 79791808 79799698 + lincRNA lincRNA MGP_BALBcJ_T0008622.1 MGP_BALBcJ_G0006969.1 mouse_genomes_project 6 79798734 79800276 + lincRNA lincRNA MGP_BALBcJ_T0002668.1 MGP_BALBcJ_G0002551.1 mouse_genomes_project 6 38199233 38199722 + MGP_BALBcJ_P0002668 Trbv26 TR_V_gene TR_V_gene MGP_BALBcJ_T0002669.1 MGP_BALBcJ_G0002551.1 mouse_genomes_project 6 38199253 38199722 + MGP_BALBcJ_P0002669 Trbv26 TR_V_gene TR_V_gene MGP_BALBcJ_T0015570.1 MGP_BALBcJ_G0013667.1 mouse_genomes_project 6 124422974 124423387 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101244.1 MGP_BALBcJ_G0039280.1 mouse_genomes_project 6 26026089 26026220 + Gm26021 snoRNA snoRNA MGP_BALBcJ_T0002181.1 MGP_BALBcJ_G0002093.1 mouse_genomes_project 6 147115851 147119363 - TEC TEC MGP_BALBcJ_T0101816.1 MGP_BALBcJ_G0039752.1 mouse_genomes_project 6 45629080 45655097 + transcribed_unitary_pseudogene processed_transcript MGP_BALBcJ_T0101817.1 MGP_BALBcJ_G0039752.1 mouse_genomes_project 6 45632783 45650703 + transcribed_unitary_pseudogene transcribed_unitary_pseudogene MGP_BALBcJ_T0101818.1 MGP_BALBcJ_G0039752.1 mouse_genomes_project 6 45636901 45652769 + transcribed_unitary_pseudogene processed_transcript MGP_BALBcJ_T0101819.1 MGP_BALBcJ_G0039752.1 mouse_genomes_project 6 45636958 45648777 + transcribed_unitary_pseudogene processed_transcript MGP_BALBcJ_T0002142.1 MGP_BALBcJ_G0002054.1 mouse_genomes_project 6 125894828 125897596 - TEC TEC MGP_BALBcJ_T0005044.1 MGP_BALBcJ_G0004305.1 mouse_genomes_project 6 112034940 112082600 + Gm15083 antisense antisense MGP_BALBcJ_T0004923.1 MGP_BALBcJ_G0004229.1 mouse_genomes_project 6 40339565 40340879 - Gm44731 antisense antisense MGP_BALBcJ_T0076842.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29600073 29735412 - MGP_BALBcJ_P0076842 Chchd3 protein_coding protein_coding MGP_BALBcJ_T0076843.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601314 29907547 - MGP_BALBcJ_P0076843 Chchd3 protein_coding protein_coding MGP_BALBcJ_T0076844.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601321 29907523 - MGP_BALBcJ_P0076844 Chchd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076845.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601734 29741594 - Chchd3 protein_coding processed_transcript MGP_BALBcJ_T0076846.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601739 29741551 - Chchd3 protein_coding processed_transcript MGP_BALBcJ_T0076847.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601740 29741544 - Chchd3 protein_coding processed_transcript MGP_BALBcJ_T0076848.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601751 29616128 - Chchd3 protein_coding processed_transcript MGP_BALBcJ_T0076849.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29601791 29631685 - Chchd3 protein_coding processed_transcript MGP_BALBcJ_T0076850.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29616123 29907524 - MGP_BALBcJ_P0076850 Chchd3 protein_coding protein_coding MGP_BALBcJ_T0076851.1 MGP_BALBcJ_G0030535.1 mouse_genomes_project 6 29664575 29907504 - MGP_BALBcJ_P0076851 Chchd3 protein_coding protein_coding MGP_BALBcJ_T0002136.1 MGP_BALBcJ_G0002048.1 mouse_genomes_project 6 124636255 124636785 - TEC TEC MGP_BALBcJ_T0002124.1 MGP_BALBcJ_G0002037.1 mouse_genomes_project 6 114542836 114545561 + TEC TEC MGP_BALBcJ_T0079800.1 MGP_BALBcJ_G0031184.1 mouse_genomes_project 6 118376554 118397209 + Il17ra protein_coding retained_intron MGP_BALBcJ_T0079801.1 MGP_BALBcJ_G0031184.1 mouse_genomes_project 6 118376554 118401058 + MGP_BALBcJ_P0079801 Il17ra protein_coding protein_coding MGP_BALBcJ_T0079802.1 MGP_BALBcJ_G0031184.1 mouse_genomes_project 6 118387054 118393490 + Il17ra protein_coding processed_transcript MGP_BALBcJ_T0078699.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85733645 85758541 - MGP_BALBcJ_P0078699 Isy1 protein_coding protein_coding MGP_BALBcJ_T0078700.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85741192 85758481 - MGP_BALBcJ_P0078700 Isy1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078701.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85741262 85742239 - Isy1 protein_coding retained_intron MGP_BALBcJ_T0078702.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85742076 85758443 - MGP_BALBcJ_P0078702 Isy1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078703.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85744939 85758499 - Isy1 protein_coding retained_intron MGP_BALBcJ_T0078704.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85746721 85758456 - Isy1 protein_coding retained_intron MGP_BALBcJ_T0078705.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85747336 85758490 - MGP_BALBcJ_P0078705 Isy1 protein_coding protein_coding MGP_BALBcJ_T0078706.1 MGP_BALBcJ_G0030979.1 mouse_genomes_project 6 85753287 85758499 - Isy1 protein_coding retained_intron MGP_BALBcJ_T0080545.1 MGP_BALBcJ_G0031363.1 mouse_genomes_project 6 131010748 131013077 - A630073D07Rik protein_coding processed_transcript MGP_BALBcJ_T0080546.1 MGP_BALBcJ_G0031363.1 mouse_genomes_project 6 131010748 131013129 - MGP_BALBcJ_P0080546 A630073D07Rik protein_coding protein_coding MGP_BALBcJ_T0080882.1 MGP_BALBcJ_G0031447.1 mouse_genomes_project 6 141205248 141251638 - MGP_BALBcJ_P0080882 Gys2 protein_coding protein_coding MGP_BALBcJ_T0080883.1 MGP_BALBcJ_G0031447.1 mouse_genomes_project 6 141205252 141206255 - MGP_BALBcJ_P0080883 Gys2 protein_coding protein_coding MGP_BALBcJ_T0008679.1 MGP_BALBcJ_G0007011.1 mouse_genomes_project 6 105641112 105648817 + 4933431M02Rik lincRNA lincRNA MGP_BALBcJ_T0078980.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90117390 90197318 + MGP_BALBcJ_P0078980 Nr2c2 protein_coding protein_coding MGP_BALBcJ_T0078981.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90118433 90192493 + MGP_BALBcJ_P0078981 Nr2c2 protein_coding protein_coding MGP_BALBcJ_T0078982.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90161539 90163365 + MGP_BALBcJ_P0078982 Nr2c2 protein_coding protein_coding MGP_BALBcJ_T0078983.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90162140 90165760 + Nr2c2 protein_coding retained_intron MGP_BALBcJ_T0078984.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90163328 90193456 + MGP_BALBcJ_P0078984 Nr2c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078985.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90169412 90181417 + Nr2c2 protein_coding processed_transcript MGP_BALBcJ_T0078986.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90181786 90183633 + Nr2c2 protein_coding retained_intron MGP_BALBcJ_T0078987.1 MGP_BALBcJ_G0031035.1 mouse_genomes_project 6 90188990 90199812 + Nr2c2 protein_coding processed_transcript MGP_BALBcJ_T0077359.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521082 45545206 + MGP_BALBcJ_P0077359 Krba1 protein_coding protein_coding MGP_BALBcJ_T0077360.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521110 45542560 + MGP_BALBcJ_P0077360 Krba1 protein_coding protein_coding MGP_BALBcJ_T0077361.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521126 45526181 + Krba1 protein_coding retained_intron MGP_BALBcJ_T0077362.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521128 45542555 + MGP_BALBcJ_P0077362 Krba1 protein_coding protein_coding MGP_BALBcJ_T0077363.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521154 45545206 + MGP_BALBcJ_P0077363 Krba1 protein_coding protein_coding MGP_BALBcJ_T0077364.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521194 45528980 + Krba1 protein_coding processed_transcript MGP_BALBcJ_T0077365.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45521362 45543122 + MGP_BALBcJ_P0077365 Krba1 protein_coding protein_coding MGP_BALBcJ_T0077366.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45529555 45534054 + Krba1 protein_coding processed_transcript MGP_BALBcJ_T0077367.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45534715 45545206 + Krba1 protein_coding retained_intron MGP_BALBcJ_T0077368.1 MGP_BALBcJ_G0030673.1 mouse_genomes_project 6 45538852 45545442 + Krba1 protein_coding retained_intron MGP_BALBcJ_T0001988.1 MGP_BALBcJ_G0001901.1 mouse_genomes_project 6 54035930 54037530 + TEC TEC MGP_BALBcJ_T0079131.1 MGP_BALBcJ_G0031065.1 mouse_genomes_project 6 98301622 98361669 - MGP_BALBcJ_P0079131 Rybp protein_coding protein_coding MGP_BALBcJ_T0079132.1 MGP_BALBcJ_G0031065.1 mouse_genomes_project 6 98305017 98306138 - Rybp protein_coding retained_intron MGP_BALBcJ_T0079133.1 MGP_BALBcJ_G0031065.1 mouse_genomes_project 6 98306100 98361181 - Rybp protein_coding retained_intron MGP_BALBcJ_T0015314.1 MGP_BALBcJ_G0013411.1 mouse_genomes_project 6 46212336 46212869 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015547.1 MGP_BALBcJ_G0013644.1 mouse_genomes_project 6 119480217 119480605 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008660.1 MGP_BALBcJ_G0006997.1 mouse_genomes_project 6 96563498 96751927 - Gm44196 lincRNA lincRNA MGP_BALBcJ_T0008662.1 MGP_BALBcJ_G0006997.1 mouse_genomes_project 6 96720013 96751946 - Gm44196 lincRNA lincRNA MGP_BALBcJ_T0008663.1 MGP_BALBcJ_G0006997.1 mouse_genomes_project 6 96747851 96751976 - Gm44196 lincRNA lincRNA MGP_BALBcJ_T0077490.1 MGP_BALBcJ_G0030703.1 mouse_genomes_project 6 46389386 46409336 - MGP_BALBcJ_P0077490 Tra2a protein_coding protein_coding MGP_BALBcJ_T0077491.1 MGP_BALBcJ_G0030703.1 mouse_genomes_project 6 46389386 46409337 - MGP_BALBcJ_P0077491 Tra2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077492.1 MGP_BALBcJ_G0030703.1 mouse_genomes_project 6 46389390 46409359 - Tra2a protein_coding retained_intron MGP_BALBcJ_T0077493.1 MGP_BALBcJ_G0030703.1 mouse_genomes_project 6 46389390 46409356 - MGP_BALBcJ_P0077493 Tra2a protein_coding protein_coding MGP_BALBcJ_T0077494.1 MGP_BALBcJ_G0030703.1 mouse_genomes_project 6 46405605 46409356 - Tra2a protein_coding retained_intron MGP_BALBcJ_T0080741.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551160 136582383 + Dera protein_coding retained_intron MGP_BALBcJ_T0080742.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551160 136558759 + Dera protein_coding processed_transcript MGP_BALBcJ_T0080743.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551170 136639038 + MGP_BALBcJ_P0080743 Dera protein_coding protein_coding MGP_BALBcJ_T0080744.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551172 136639475 + MGP_BALBcJ_P0080744 Dera protein_coding protein_coding MGP_BALBcJ_T0080745.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551190 136659047 + MGP_BALBcJ_P0080745 Dera protein_coding protein_coding MGP_BALBcJ_T0080746.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551205 136563065 + Dera protein_coding processed_transcript MGP_BALBcJ_T0080747.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551222 136638753 + MGP_BALBcJ_P0080747 Dera protein_coding unknown_likely_coding MGP_BALBcJ_T0080748.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136551229 136639017 + MGP_BALBcJ_P0080748 Dera protein_coding protein_coding MGP_BALBcJ_T0080749.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136558462 136558760 + Dera protein_coding TEC MGP_BALBcJ_T0080750.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136571733 136583208 + Dera protein_coding processed_transcript MGP_BALBcJ_T0080751.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136577353 136579018 + Dera protein_coding retained_intron MGP_BALBcJ_T0080752.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136580183 136639064 + MGP_BALBcJ_P0080752 Dera protein_coding protein_coding MGP_BALBcJ_T0080753.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136597060 136609708 + Dera protein_coding processed_transcript MGP_BALBcJ_T0080754.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136631078 136658521 + MGP_BALBcJ_P0080754 Dera protein_coding protein_coding MGP_BALBcJ_T0080755.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136637195 136639661 + Dera protein_coding retained_intron MGP_BALBcJ_T0080756.1 MGP_BALBcJ_G0031420.1 mouse_genomes_project 6 136638432 136645282 + MGP_BALBcJ_P0080756 Dera protein_coding protein_coding MGP_BALBcJ_T0101300.1 MGP_BALBcJ_G0039336.1 mouse_genomes_project 6 133804619 133804753 + Gm22881 snoRNA snoRNA MGP_BALBcJ_T0077711.1 MGP_BALBcJ_G0030754.1 mouse_genomes_project 6 52609876 52616417 + Ghrhr protein_coding retained_intron MGP_BALBcJ_T0077712.1 MGP_BALBcJ_G0030754.1 mouse_genomes_project 6 52609924 52621907 + MGP_BALBcJ_P0077712 Ghrhr protein_coding protein_coding MGP_BALBcJ_T0077713.1 MGP_BALBcJ_G0030754.1 mouse_genomes_project 6 52609946 52621696 + MGP_BALBcJ_P0077713 Ghrhr protein_coding protein_coding MGP_BALBcJ_T0077893.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 62991498 63096354 + MGP_BALBcJ_P0077893 Tnip3 protein_coding unknown_likely_coding MGP_BALBcJ_T0077894.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 63056412 63099286 + MGP_BALBcJ_P0077894 Tnip3 protein_coding protein_coding MGP_BALBcJ_T0077895.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 63056430 63066189 + Tnip3 protein_coding retained_intron MGP_BALBcJ_T0077896.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 63056442 63057676 + Tnip3 protein_coding processed_transcript MGP_BALBcJ_T0077897.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 63056473 63059715 + Tnip3 protein_coding retained_intron MGP_BALBcJ_T0077898.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 63056501 63061128 + Tnip3 protein_coding retained_intron MGP_BALBcJ_T0077899.1 MGP_BALBcJ_G0030810.1 mouse_genomes_project 6 63063588 63066212 + Tnip3 protein_coding retained_intron MGP_BALBcJ_T0076487.1 MGP_BALBcJ_G0030466.1 mouse_genomes_project 6 19069647 19119989 - MGP_BALBcJ_P0076487 Fam3c protein_coding protein_coding MGP_BALBcJ_T0076488.1 MGP_BALBcJ_G0030466.1 mouse_genomes_project 6 19071011 19119915 - MGP_BALBcJ_P0076488 Fam3c protein_coding protein_coding MGP_BALBcJ_T0076489.1 MGP_BALBcJ_G0030466.1 mouse_genomes_project 6 19071589 19093020 - Fam3c protein_coding processed_transcript MGP_BALBcJ_T0076490.1 MGP_BALBcJ_G0030466.1 mouse_genomes_project 6 19072456 19119890 - MGP_BALBcJ_P0076490 Fam3c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076491.1 MGP_BALBcJ_G0030466.1 mouse_genomes_project 6 19085859 19107730 - MGP_BALBcJ_P0076491 Fam3c protein_coding protein_coding MGP_BALBcJ_T0101307.1 MGP_BALBcJ_G0039343.1 mouse_genomes_project 6 147724080 147724202 + Gm25539 snoRNA snoRNA MGP_BALBcJ_T0101246.1 MGP_BALBcJ_G0039282.1 mouse_genomes_project 6 35946296 35946422 + Gm23010 snoRNA snoRNA MGP_BALBcJ_T0005079.1 MGP_BALBcJ_G0004336.1 mouse_genomes_project 6 132949448 133046339 - Gm44293 antisense antisense MGP_BALBcJ_T0081179.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148178010 148189355 + Bicd1 protein_coding retained_intron MGP_BALBcJ_T0081180.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148178108 148335682 + MGP_BALBcJ_P0081180 Bicd1 protein_coding protein_coding MGP_BALBcJ_T0081181.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148178140 148330172 + MGP_BALBcJ_P0081181 Bicd1 protein_coding protein_coding MGP_BALBcJ_T0081182.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148178193 148271738 + Bicd1 protein_coding retained_intron MGP_BALBcJ_T0081183.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148178553 148329072 + MGP_BALBcJ_P0081183 Bicd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081184.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148178553 148329072 + MGP_BALBcJ_P0081184 Bicd1 protein_coding protein_coding MGP_BALBcJ_T0081185.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148287428 148292915 + Bicd1 protein_coding retained_intron MGP_BALBcJ_T0081186.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148290538 148294019 + MGP_BALBcJ_P0081186 Bicd1 protein_coding protein_coding MGP_BALBcJ_T0081187.1 MGP_BALBcJ_G0031495.1 mouse_genomes_project 6 148318214 148331210 + Bicd1 protein_coding retained_intron MGP_BALBcJ_T0002099.1 MGP_BALBcJ_G0002012.1 mouse_genomes_project 6 99222845 99225705 + TEC TEC MGP_BALBcJ_T0079482.1 MGP_BALBcJ_G0031129.1 mouse_genomes_project 6 113447484 113457088 + MGP_BALBcJ_P0079482 Tsen2 protein_coding protein_coding MGP_BALBcJ_T0079483.1 MGP_BALBcJ_G0031129.1 mouse_genomes_project 6 113447484 113481855 + MGP_BALBcJ_P0079483 Tsen2 protein_coding protein_coding MGP_BALBcJ_T0079484.1 MGP_BALBcJ_G0031129.1 mouse_genomes_project 6 113447522 113462568 + Tsen2 protein_coding processed_transcript MGP_BALBcJ_T0079485.1 MGP_BALBcJ_G0031129.1 mouse_genomes_project 6 113447526 113455177 + Tsen2 protein_coding retained_intron MGP_BALBcJ_T0079486.1 MGP_BALBcJ_G0031129.1 mouse_genomes_project 6 113477674 113481218 + Tsen2 protein_coding retained_intron MGP_BALBcJ_T0081147.1 MGP_BALBcJ_G0031491.1 mouse_genomes_project 6 147888034 147888672 + MGP_BALBcJ_P0081147 Gm10203 protein_coding protein_coding MGP_BALBcJ_T0099992.1 MGP_BALBcJ_G0038028.1 mouse_genomes_project 6 25902937 25903103 - Gm25589 snRNA snRNA MGP_BALBcJ_T0008712.1 MGP_BALBcJ_G0007042.1 mouse_genomes_project 6 126287249 126310184 - lincRNA lincRNA MGP_BALBcJ_T0077583.1 MGP_BALBcJ_G0030727.1 mouse_genomes_project 6 49411001 49416904 - MGP_BALBcJ_P0077583 Hoxa7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077584.1 MGP_BALBcJ_G0030727.1 mouse_genomes_project 6 49411008 49414016 - MGP_BALBcJ_P0077584 Hoxa7 protein_coding protein_coding MGP_BALBcJ_T0077585.1 MGP_BALBcJ_G0030727.1 mouse_genomes_project 6 49412263 49415222 - MGP_BALBcJ_P0077585 Hoxa7 protein_coding protein_coding MGP_BALBcJ_T0077586.1 MGP_BALBcJ_G0030727.1 mouse_genomes_project 6 49412519 49418349 - MGP_BALBcJ_P0077586 Hoxa7 protein_coding protein_coding MGP_BALBcJ_T0077587.1 MGP_BALBcJ_G0030727.1 mouse_genomes_project 6 49412950 49413963 - MGP_BALBcJ_P0077587 Hoxa7 protein_coding protein_coding MGP_BALBcJ_T0080562.1 MGP_BALBcJ_G0031379.1 mouse_genomes_project 6 131377406 131378334 - MGP_BALBcJ_P0080562 Tas2r103 protein_coding protein_coding MGP_BALBcJ_T0008596.1 MGP_BALBcJ_G0006946.1 mouse_genomes_project 6 57968147 57968637 + Gm44410 lincRNA lincRNA MGP_BALBcJ_T0002027.1 MGP_BALBcJ_G0001940.1 mouse_genomes_project 6 78073684 78077234 + TEC TEC MGP_BALBcJ_T0015575.1 MGP_BALBcJ_G0013672.1 mouse_genomes_project 6 125261591 125261901 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008753.1 MGP_BALBcJ_G0007068.1 mouse_genomes_project 6 144544403 144551972 - Gm15704 lincRNA lincRNA MGP_BALBcJ_T0079174.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788152 104796714 + MGP_BALBcJ_P0079174 Trnt1 protein_coding protein_coding MGP_BALBcJ_T0079175.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788173 104800904 + MGP_BALBcJ_P0079175 Trnt1 protein_coding protein_coding MGP_BALBcJ_T0079176.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788198 104801695 + MGP_BALBcJ_P0079176 Trnt1 protein_coding protein_coding MGP_BALBcJ_T0079177.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788198 104800687 + MGP_BALBcJ_P0079177 Trnt1 protein_coding protein_coding MGP_BALBcJ_T0079178.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788202 104789197 + Trnt1 protein_coding retained_intron MGP_BALBcJ_T0079179.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788245 104792088 + Trnt1 protein_coding processed_transcript MGP_BALBcJ_T0079180.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788318 104792384 + MGP_BALBcJ_P0079180 Trnt1 protein_coding protein_coding MGP_BALBcJ_T0079181.1 MGP_BALBcJ_G0031075.1 mouse_genomes_project 6 104788539 104793498 + MGP_BALBcJ_P0079181 Trnt1 protein_coding protein_coding MGP_BALBcJ_T0011816.1 MGP_BALBcJ_G0009916.1 mouse_genomes_project 6 127680007 127691303 - MGP_BALBcJ_P0011816 Clec7a polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011817.1 MGP_BALBcJ_G0009916.1 mouse_genomes_project 6 127680007 127691298 - MGP_BALBcJ_P0011817 Clec7a polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011818.1 MGP_BALBcJ_G0009916.1 mouse_genomes_project 6 127681450 127691303 - MGP_BALBcJ_P0011818 Clec7a polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011819.1 MGP_BALBcJ_G0009916.1 mouse_genomes_project 6 127689066 127691305 - Clec7a polymorphic_pseudogene retained_intron MGP_BALBcJ_T0015438.1 MGP_BALBcJ_G0013535.1 mouse_genomes_project 6 81677239 81677786 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076592.1 MGP_BALBcJ_G0030495.1 mouse_genomes_project 6 25447926 25620102 - MGP_BALBcJ_P0076592 Lrrc4 protein_coding protein_coding MGP_BALBcJ_T0076597.1 MGP_BALBcJ_G0030495.1 mouse_genomes_project 6 25617889 25621504 - MGP_BALBcJ_P0076597 Lrrc4 protein_coding protein_coding MGP_BALBcJ_T0005100.1 MGP_BALBcJ_G0004354.1 mouse_genomes_project 6 143838857 143841732 + Gm26666 antisense antisense MGP_BALBcJ_T0077573.1 MGP_BALBcJ_G0030720.1 mouse_genomes_project 6 49357298 49359713 - MGP_BALBcJ_P0077573 Hoxa2 protein_coding protein_coding MGP_BALBcJ_T0080560.1 MGP_BALBcJ_G0031377.1 mouse_genomes_project 6 131306278 131307280 - MGP_BALBcJ_P0080560 Tas2r123 protein_coding protein_coding MGP_BALBcJ_T0015596.1 MGP_BALBcJ_G0013693.1 mouse_genomes_project 6 128684481 128684820 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015300.1 MGP_BALBcJ_G0013397.1 mouse_genomes_project 6 44684517 44684707 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015336.1 MGP_BALBcJ_G0013433.1 mouse_genomes_project 6 55450299 55450558 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015536.1 MGP_BALBcJ_G0013633.1 mouse_genomes_project 6 115686720 115687221 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018258.1 MGP_BALBcJ_G0015581.1 mouse_genomes_project 6 93314921 93399220 - AY512915 processed_transcript antisense MGP_BALBcJ_T0018259.1 MGP_BALBcJ_G0015581.1 mouse_genomes_project 6 93337200 93399207 - AY512915 processed_transcript antisense MGP_BALBcJ_T0018260.1 MGP_BALBcJ_G0015581.1 mouse_genomes_project 6 93351091 93399222 - AY512915 processed_transcript lincRNA MGP_BALBcJ_T0018261.1 MGP_BALBcJ_G0015581.1 mouse_genomes_project 6 93374434 93399200 - AY512915 processed_transcript antisense MGP_BALBcJ_T0018262.1 MGP_BALBcJ_G0015581.1 mouse_genomes_project 6 93388234 93399206 - AY512915 processed_transcript processed_transcript MGP_BALBcJ_T0015465.1 MGP_BALBcJ_G0013562.1 mouse_genomes_project 6 90588273 90589270 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0076549.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22501280 22574219 - MGP_BALBcJ_P0076549 Pot1a protein_coding protein_coding MGP_BALBcJ_T0076550.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22502044 22503740 - Pot1a protein_coding retained_intron MGP_BALBcJ_T0076551.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22502124 22563016 - MGP_BALBcJ_P0076551 Pot1a protein_coding protein_coding MGP_BALBcJ_T0076552.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22510247 22574219 - Pot1a protein_coding retained_intron MGP_BALBcJ_T0076553.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22519177 22574188 - MGP_BALBcJ_P0076553 Pot1a protein_coding protein_coding MGP_BALBcJ_T0076554.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22537176 22574215 - Pot1a protein_coding processed_transcript MGP_BALBcJ_T0076555.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22559460 22574239 - Pot1a protein_coding retained_intron MGP_BALBcJ_T0076556.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22563534 22574209 - Pot1a protein_coding retained_intron MGP_BALBcJ_T0076557.1 MGP_BALBcJ_G0030487.1 mouse_genomes_project 6 22565318 22566391 - Pot1a protein_coding processed_transcript MGP_BALBcJ_T0102612.1 MGP_BALBcJ_G0040428.1 mouse_genomes_project 6 54481187 54482025 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015461.1 MGP_BALBcJ_G0013558.1 mouse_genomes_project 6 89436588 89438430 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008476.1 MGP_BALBcJ_G0006864.1 mouse_genomes_project 6 3184253 3214428 - Gm20617 lincRNA lincRNA MGP_BALBcJ_T0008477.1 MGP_BALBcJ_G0006864.1 mouse_genomes_project 6 3184657 3214593 - Gm20617 lincRNA lincRNA MGP_BALBcJ_T0080682.1 MGP_BALBcJ_G0031407.1 mouse_genomes_project 6 135426309 135507997 - MGP_BALBcJ_P0080682 Gucy2c protein_coding protein_coding MGP_BALBcJ_T0080683.1 MGP_BALBcJ_G0031407.1 mouse_genomes_project 6 135426310 135507974 - MGP_BALBcJ_P0080683 Gucy2c protein_coding protein_coding MGP_BALBcJ_T0015295.1 MGP_BALBcJ_G0013392.1 mouse_genomes_project 6 41734990 41735135 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0080194.1 MGP_BALBcJ_G0031264.1 mouse_genomes_project 6 123212412 123226419 + MGP_BALBcJ_P0080194 Nop2 protein_coding protein_coding MGP_BALBcJ_T0080195.1 MGP_BALBcJ_G0031264.1 mouse_genomes_project 6 123212550 123215220 + MGP_BALBcJ_P0080195 Nop2 protein_coding protein_coding MGP_BALBcJ_T0076257.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4391541 4413765 - MGP_BALBcJ_P0076257 Asns protein_coding protein_coding MGP_BALBcJ_T0076258.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4391541 4413382 - MGP_BALBcJ_P0076258 Asns protein_coding protein_coding MGP_BALBcJ_T0076259.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4391842 4393768 - Asns protein_coding processed_transcript MGP_BALBcJ_T0076260.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4397660 4398741 - Asns protein_coding retained_intron MGP_BALBcJ_T0076261.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4398655 4413621 - MGP_BALBcJ_P0076261 Asns protein_coding protein_coding MGP_BALBcJ_T0076262.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4405710 4412729 - MGP_BALBcJ_P0076262 Asns protein_coding protein_coding MGP_BALBcJ_T0076263.1 MGP_BALBcJ_G0030426.1 mouse_genomes_project 6 4405802 4413383 - MGP_BALBcJ_P0076263 Asns protein_coding protein_coding MGP_BALBcJ_T0100001.1 MGP_BALBcJ_G0038037.1 mouse_genomes_project 6 39761910 39762018 - Gm22363 snRNA snRNA MGP_BALBcJ_T0101236.1 MGP_BALBcJ_G0039272.1 mouse_genomes_project 6 5221899 5222020 - Gm26075 snoRNA snoRNA MGP_BALBcJ_T0102630.1 MGP_BALBcJ_G0040446.1 mouse_genomes_project 6 71173532 71174436 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002146.1 MGP_BALBcJ_G0002058.1 mouse_genomes_project 6 127244459 127244656 - TEC TEC MGP_BALBcJ_T0077279.1 MGP_BALBcJ_G0030653.1 mouse_genomes_project 6 40214156 40215156 + MGP_BALBcJ_P0077279 Olfr237-ps1 protein_coding protein_coding MGP_BALBcJ_T0080644.1 MGP_BALBcJ_G0031399.1 mouse_genomes_project 6 133903384 133914122 - MGP_BALBcJ_P0080644 Gsg1 protein_coding protein_coding MGP_BALBcJ_T0080645.1 MGP_BALBcJ_G0031399.1 mouse_genomes_project 6 133903387 133923713 - MGP_BALBcJ_P0080645 Gsg1 protein_coding protein_coding MGP_BALBcJ_T0080646.1 MGP_BALBcJ_G0031399.1 mouse_genomes_project 6 133903387 133923869 - MGP_BALBcJ_P0080646 Gsg1 protein_coding protein_coding MGP_BALBcJ_T0080647.1 MGP_BALBcJ_G0031399.1 mouse_genomes_project 6 133903394 133923894 - MGP_BALBcJ_P0080647 Gsg1 protein_coding protein_coding MGP_BALBcJ_T0015380.1 MGP_BALBcJ_G0013477.1 mouse_genomes_project 6 64165516 64165973 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010750.1 MGP_BALBcJ_G0008875.1 mouse_genomes_project 6 48444976 48445075 - Mir148a miRNA miRNA MGP_BALBcJ_T0100028.1 MGP_BALBcJ_G0038064.1 mouse_genomes_project 6 116722530 116722631 + Gm25905 snRNA snRNA MGP_BALBcJ_T0008592.1 MGP_BALBcJ_G0006943.1 mouse_genomes_project 6 52922545 52932547 + Gm3279 lincRNA lincRNA MGP_BALBcJ_T0015284.1 MGP_BALBcJ_G0013381.1 mouse_genomes_project 6 37990338 37990719 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0004918.1 MGP_BALBcJ_G0004225.1 mouse_genomes_project 6 37164079 37170014 - Gm26807 antisense antisense MGP_BALBcJ_T0008766.1 MGP_BALBcJ_G0007077.1 mouse_genomes_project 6 147412368 147429046 - 4930528G23Rik lincRNA lincRNA MGP_BALBcJ_T0008586.1 MGP_BALBcJ_G0006938.1 mouse_genomes_project 6 49710107 49714246 + Gm44028 lincRNA lincRNA MGP_BALBcJ_T0102651.1 MGP_BALBcJ_G0040466.1 mouse_genomes_project 6 127987998 127995672 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011815.1 MGP_BALBcJ_G0009915.1 mouse_genomes_project 6 39787536 39788472 + MGP_BALBcJ_P0011815 Olfr451-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0079858.1 MGP_BALBcJ_G0031196.1 mouse_genomes_project 6 119223295 119261088 + MGP_BALBcJ_P0079858 Slc6a13 protein_coding protein_coding MGP_BALBcJ_T0079859.1 MGP_BALBcJ_G0031196.1 mouse_genomes_project 6 119223357 119256946 + Slc6a13 protein_coding retained_intron MGP_BALBcJ_T0079860.1 MGP_BALBcJ_G0031196.1 mouse_genomes_project 6 119223357 119226369 + Slc6a13 protein_coding retained_intron MGP_BALBcJ_T0079861.1 MGP_BALBcJ_G0031196.1 mouse_genomes_project 6 119223850 119247699 + MGP_BALBcJ_P0079861 Slc6a13 protein_coding protein_coding MGP_BALBcJ_T0076547.1 MGP_BALBcJ_G0030486.1 mouse_genomes_project 6 22423672 22447499 - MGP_BALBcJ_P0076547 Gpr37 protein_coding protein_coding MGP_BALBcJ_T0076548.1 MGP_BALBcJ_G0030486.1 mouse_genomes_project 6 22425207 22448436 - MGP_BALBcJ_P0076548 Gpr37 protein_coding protein_coding MGP_BALBcJ_T0015200.1 MGP_BALBcJ_G0013297.1 mouse_genomes_project 6 19928 21353 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077872.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530068 62543949 + MGP_BALBcJ_P0077872 protein_coding protein_coding MGP_BALBcJ_T0077873.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530106 62531047 + protein_coding retained_intron MGP_BALBcJ_T0077874.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530152 62531617 + MGP_BALBcJ_P0077874 protein_coding protein_coding MGP_BALBcJ_T0077875.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530321 62531689 + MGP_BALBcJ_P0077875 protein_coding protein_coding MGP_BALBcJ_T0077876.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530343 62540262 + MGP_BALBcJ_P0077876 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077877.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530351 62540351 + MGP_BALBcJ_P0077877 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077878.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530364 62569508 + protein_coding processed_transcript MGP_BALBcJ_T0077879.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530504 62601677 + MGP_BALBcJ_P0077879 protein_coding unknown_likely_coding MGP_BALBcJ_T0077880.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62530698 62601221 + MGP_BALBcJ_P0077880 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077881.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62540384 62555396 + protein_coding retained_intron MGP_BALBcJ_T0077882.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62545572 62562832 + protein_coding processed_transcript MGP_BALBcJ_T0077883.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62562997 62582408 + MGP_BALBcJ_P0077883 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077884.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62565322 62568384 + protein_coding retained_intron MGP_BALBcJ_T0077885.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62587509 62588152 + protein_coding retained_intron MGP_BALBcJ_T0077886.1 MGP_BALBcJ_G0030807.1 mouse_genomes_project 6 62593075 62595601 + protein_coding retained_intron MGP_BALBcJ_T0000173.1 MGP_BALBcJ_G0000132.1 mouse_genomes_project 6 67488503 67489092 - MGP_BALBcJ_P0000173 IG_V_gene IG_V_gene MGP_BALBcJ_T0078623.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84654851 84684098 - MGP_BALBcJ_P0078623 Anxa4 protein_coding protein_coding MGP_BALBcJ_T0078624.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84654852 84713963 - MGP_BALBcJ_P0078624 Anxa4 protein_coding protein_coding MGP_BALBcJ_T0078625.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84654858 84684012 - MGP_BALBcJ_P0078625 Anxa4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0078626.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84655666 84663073 - Anxa4 protein_coding retained_intron MGP_BALBcJ_T0078627.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84655739 84678924 - MGP_BALBcJ_P0078627 Anxa4 protein_coding protein_coding MGP_BALBcJ_T0078628.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84659923 84683995 - MGP_BALBcJ_P0078628 Anxa4 protein_coding protein_coding MGP_BALBcJ_T0078629.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84659930 84713943 - MGP_BALBcJ_P0078629 Anxa4 protein_coding protein_coding MGP_BALBcJ_T0078630.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84661135 84713943 - MGP_BALBcJ_P0078630 Anxa4 protein_coding protein_coding MGP_BALBcJ_T0078631.1 MGP_BALBcJ_G0030962.1 mouse_genomes_project 6 84665811 84684098 - Anxa4 protein_coding retained_intron MGP_BALBcJ_T0077984.1 MGP_BALBcJ_G0030837.1 mouse_genomes_project 6 69065878 69080953 + MGP_BALBcJ_P0077984 Cd8b1 protein_coding protein_coding MGP_BALBcJ_T0000302.1 MGP_BALBcJ_G0000243.1 mouse_genomes_project 6 66997592 66998125 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0000277.1 MGP_BALBcJ_G0000218.1 mouse_genomes_project 6 65691963 65692367 + IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0015275.1 MGP_BALBcJ_G0013372.1 mouse_genomes_project 6 34762848 34763573 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101270.1 MGP_BALBcJ_G0039306.1 mouse_genomes_project 6 72107965 72108097 - Gm26179 snoRNA snoRNA MGP_BALBcJ_T0081122.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147599521 147600684 - Caprin2 protein_coding retained_intron MGP_BALBcJ_T0081123.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147599521 147653054 - MGP_BALBcJ_P0081123 Caprin2 protein_coding protein_coding MGP_BALBcJ_T0081124.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147599522 147608318 - MGP_BALBcJ_P0081124 Caprin2 protein_coding protein_coding MGP_BALBcJ_T0081125.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147599522 147652967 - MGP_BALBcJ_P0081125 Caprin2 protein_coding protein_coding MGP_BALBcJ_T0081126.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147601066 147606106 - Caprin2 protein_coding retained_intron MGP_BALBcJ_T0081127.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147601594 147608289 - Caprin2 protein_coding processed_transcript MGP_BALBcJ_T0081128.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147604531 147617535 - Caprin2 protein_coding processed_transcript MGP_BALBcJ_T0081129.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147634818 147652276 - MGP_BALBcJ_P0081129 Caprin2 protein_coding protein_coding MGP_BALBcJ_T0081130.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147641452 147647733 - Caprin2 protein_coding retained_intron MGP_BALBcJ_T0081131.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147644585 147652979 - Caprin2 protein_coding processed_transcript MGP_BALBcJ_T0081132.1 MGP_BALBcJ_G0031488.1 mouse_genomes_project 6 147650986 147652426 - Caprin2 protein_coding processed_transcript MGP_BALBcJ_T0099003.1 MGP_BALBcJ_G0037046.1 mouse_genomes_project 6 127640647 127641241 + Gm43914 sense_intronic sense_intronic MGP_BALBcJ_T0004929.1 MGP_BALBcJ_G0004234.1 mouse_genomes_project 6 49351745 49353375 + Hotairm1 antisense antisense MGP_BALBcJ_T0004930.1 MGP_BALBcJ_G0004234.1 mouse_genomes_project 6 49353278 49356988 + Hotairm1 antisense antisense MGP_BALBcJ_T0004931.1 MGP_BALBcJ_G0004234.1 mouse_genomes_project 6 49353370 49356889 + Hotairm1 antisense antisense MGP_BALBcJ_T0081111.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147524339 147544072 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081112.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147524339 147588010 - MGP_BALBcJ_P0081112 Ipo8 protein_coding protein_coding MGP_BALBcJ_T0081113.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147524349 147529266 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081114.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147529943 147532358 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081115.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147530552 147536723 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081116.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147538666 147554091 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081117.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147545025 147581111 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081118.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147557200 147574417 - Ipo8 protein_coding processed_transcript MGP_BALBcJ_T0081119.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147557201 147588007 - MGP_BALBcJ_P0081119 Ipo8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081120.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147557203 147587969 - MGP_BALBcJ_P0081120 Ipo8 protein_coding protein_coding MGP_BALBcJ_T0081121.1 MGP_BALBcJ_G0031487.1 mouse_genomes_project 6 147575948 147578854 - Ipo8 protein_coding retained_intron MGP_BALBcJ_T0081034.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145405646 145413707 + Med21 protein_coding processed_transcript MGP_BALBcJ_T0081035.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145405646 145413707 + MGP_BALBcJ_P0081035 Med21 protein_coding protein_coding MGP_BALBcJ_T0081036.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145405678 145407071 + Med21 protein_coding retained_intron MGP_BALBcJ_T0081037.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145405679 145412638 + MGP_BALBcJ_P0081037 Med21 protein_coding protein_coding MGP_BALBcJ_T0081038.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145405680 145413707 + Med21 protein_coding processed_transcript MGP_BALBcJ_T0081039.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145405690 145413837 + MGP_BALBcJ_P0081039 Med21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081040.1 MGP_BALBcJ_G0031472.1 mouse_genomes_project 6 145410504 145413707 + Med21 protein_coding retained_intron MGP_BALBcJ_T0008661.1 MGP_BALBcJ_G0006998.1 mouse_genomes_project 6 96590874 96607450 - Gm44197 lincRNA lincRNA MGP_BALBcJ_T0079412.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111769398 112072171 - MGP_BALBcJ_P0079412 Atp2b2 protein_coding protein_coding MGP_BALBcJ_T0079413.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111771236 111917677 - MGP_BALBcJ_P0079413 Atp2b2 protein_coding protein_coding MGP_BALBcJ_T0079414.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111771237 112072171 - MGP_BALBcJ_P0079414 Atp2b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0079415.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111772633 111917677 - MGP_BALBcJ_P0079415 Atp2b2 protein_coding protein_coding MGP_BALBcJ_T0079416.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111773861 111961451 - MGP_BALBcJ_P0079416 Atp2b2 protein_coding protein_coding MGP_BALBcJ_T0079417.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111829034 111917508 - Atp2b2 protein_coding retained_intron MGP_BALBcJ_T0079418.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111868013 111936696 - Atp2b2 protein_coding processed_transcript MGP_BALBcJ_T0079419.1 MGP_BALBcJ_G0031118.1 mouse_genomes_project 6 111868231 112072626 - Atp2b2 protein_coding processed_transcript MGP_BALBcJ_T0001936.1 MGP_BALBcJ_G0001849.1 mouse_genomes_project 6 25586221 25589466 + TEC TEC MGP_BALBcJ_T0077182.1 MGP_BALBcJ_G0030616.1 mouse_genomes_project 6 38659127 38660414 + MGP_BALBcJ_P0077182 1700034O15Rik protein_coding protein_coding MGP_BALBcJ_T0015313.1 MGP_BALBcJ_G0013410.1 mouse_genomes_project 6 46203179 46203486 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011609.1 MGP_BALBcJ_G0009734.1 mouse_genomes_project 6 14656983 14657120 + Gm27444 misc_RNA misc_RNA MGP_BALBcJ_T0077049.1 MGP_BALBcJ_G0030574.1 mouse_genomes_project 6 35628345 35807426 - MGP_BALBcJ_P0077049 Hipk2 protein_coding protein_coding MGP_BALBcJ_T0077050.1 MGP_BALBcJ_G0030574.1 mouse_genomes_project 6 35628350 35807474 - MGP_BALBcJ_P0077050 Hipk2 protein_coding protein_coding MGP_BALBcJ_T0077051.1 MGP_BALBcJ_G0030574.1 mouse_genomes_project 6 35629230 35807320 - MGP_BALBcJ_P0077051 Hipk2 protein_coding protein_coding MGP_BALBcJ_T0077052.1 MGP_BALBcJ_G0030574.1 mouse_genomes_project 6 35667750 35674312 - Hipk2 protein_coding processed_transcript MGP_BALBcJ_T0077053.1 MGP_BALBcJ_G0030574.1 mouse_genomes_project 6 35676494 35749572 - Hipk2 protein_coding retained_intron MGP_BALBcJ_T0077054.1 MGP_BALBcJ_G0030574.1 mouse_genomes_project 6 35749132 35768991 - Hipk2 protein_coding retained_intron MGP_BALBcJ_T0077931.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64491478 64493789 - MGP_BALBcJ_P0077931 Gadd45a protein_coding protein_coding MGP_BALBcJ_T0077932.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64491841 64493584 - Gadd45a protein_coding retained_intron MGP_BALBcJ_T0077933.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64491841 64493747 - MGP_BALBcJ_P0077933 Gadd45a protein_coding protein_coding MGP_BALBcJ_T0077934.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64491848 64493634 - MGP_BALBcJ_P0077934 Gadd45a protein_coding protein_coding MGP_BALBcJ_T0077935.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64491961 64493569 - Gadd45a protein_coding retained_intron MGP_BALBcJ_T0077936.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64492753 64493760 - Gadd45a protein_coding retained_intron MGP_BALBcJ_T0077937.1 MGP_BALBcJ_G0030824.1 mouse_genomes_project 6 64493279 64493840 - Gadd45a protein_coding retained_intron MGP_BALBcJ_T0008573.1 MGP_BALBcJ_G0006929.1 mouse_genomes_project 6 48458616 48462997 - Gm44447 lincRNA lincRNA MGP_BALBcJ_T0011645.1 MGP_BALBcJ_G0009770.1 mouse_genomes_project 6 110018027 110018342 + Gm26362 misc_RNA misc_RNA MGP_BALBcJ_T0015210.1 MGP_BALBcJ_G0013307.1 mouse_genomes_project 6 3363065 3365790 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015282.1 MGP_BALBcJ_G0013379.1 mouse_genomes_project 6 37490938 37491350 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008493.1 MGP_BALBcJ_G0006876.1 mouse_genomes_project 6 13515148 13526236 + Gm36669 lincRNA lincRNA MGP_BALBcJ_T0076693.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26583703 26584420 + MGP_BALBcJ_P0076693 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076694.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26584135 26683704 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076695.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26584184 26728844 + MGP_BALBcJ_P0076695 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076696.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26584190 26586336 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076697.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26584220 26686980 + MGP_BALBcJ_P0076697 Ahcyl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076698.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26584230 26728850 + MGP_BALBcJ_P0076698 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076699.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26615475 26700056 + MGP_BALBcJ_P0076699 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076700.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26670044 26725749 + MGP_BALBcJ_P0076700 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076701.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26670051 26679521 + MGP_BALBcJ_P0076701 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076702.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26670053 26686992 + MGP_BALBcJ_P0076702 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076703.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26670058 26696962 + MGP_BALBcJ_P0076703 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076704.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26670175 26683704 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076705.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26675663 26728838 + MGP_BALBcJ_P0076705 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076706.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26675969 26700065 + MGP_BALBcJ_P0076706 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076707.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26675994 26700058 + MGP_BALBcJ_P0076707 Ahcyl2 protein_coding protein_coding MGP_BALBcJ_T0076708.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26681671 26687582 + Ahcyl2 protein_coding processed_transcript MGP_BALBcJ_T0076709.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26686655 26728843 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076710.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26693051 26695452 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076711.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26710126 26712532 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076712.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26712686 26725589 + Ahcyl2 protein_coding retained_intron MGP_BALBcJ_T0076713.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26719391 26725741 + Ahcyl2 protein_coding processed_transcript MGP_BALBcJ_T0076714.1 MGP_BALBcJ_G0030514.1 mouse_genomes_project 6 26719863 26725685 + Ahcyl2 protein_coding processed_transcript MGP_BALBcJ_T0004913.1 MGP_BALBcJ_G0004221.1 mouse_genomes_project 6 36052288 36083550 + 4930599N23Rik antisense antisense MGP_BALBcJ_T0080575.1 MGP_BALBcJ_G0031385.1 mouse_genomes_project 6 133039249 133082212 + MGP_BALBcJ_P0080575 Bcl2l14 protein_coding protein_coding MGP_BALBcJ_T0080576.1 MGP_BALBcJ_G0031385.1 mouse_genomes_project 6 133039276 133046281 + Bcl2l14 protein_coding processed_transcript MGP_BALBcJ_T0080577.1 MGP_BALBcJ_G0031385.1 mouse_genomes_project 6 133041585 133082200 + MGP_BALBcJ_P0080577 Bcl2l14 protein_coding protein_coding MGP_BALBcJ_T0080578.1 MGP_BALBcJ_G0031385.1 mouse_genomes_project 6 133041597 133067137 + MGP_BALBcJ_P0080578 Bcl2l14 protein_coding protein_coding MGP_BALBcJ_T0080579.1 MGP_BALBcJ_G0031385.1 mouse_genomes_project 6 133057382 133081591 + MGP_BALBcJ_P0080579 Bcl2l14 protein_coding protein_coding MGP_BALBcJ_T0080580.1 MGP_BALBcJ_G0031385.1 mouse_genomes_project 6 133057419 133071936 + Bcl2l14 protein_coding retained_intron MGP_BALBcJ_T0000297.1 MGP_BALBcJ_G0000238.1 mouse_genomes_project 6 66608279 66608909 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0080405.1 MGP_BALBcJ_G0031309.1 mouse_genomes_project 6 126750953 127000563 - MGP_BALBcJ_P0080405 protein_coding protein_coding MGP_BALBcJ_T0080414.1 MGP_BALBcJ_G0031309.1 mouse_genomes_project 6 126947853 127000500 - MGP_BALBcJ_P0080414 protein_coding protein_coding MGP_BALBcJ_T0002057.1 MGP_BALBcJ_G0001970.1 mouse_genomes_project 6 85724906 85725769 - TEC TEC MGP_BALBcJ_T0080648.1 MGP_BALBcJ_G0031400.1 mouse_genomes_project 6 133974446 133975726 - MGP_BALBcJ_P0080648 Pbp2 protein_coding protein_coding MGP_BALBcJ_T0010756.1 MGP_BALBcJ_G0008881.1 mouse_genomes_project 6 67737513 67737623 - Gm23694 miRNA miRNA MGP_BALBcJ_T0098382.1 MGP_BALBcJ_G0036436.1 mouse_genomes_project 6 44551148 44551693 - pseudogene pseudogene MGP_BALBcJ_T0002164.1 MGP_BALBcJ_G0002076.1 mouse_genomes_project 6 138560977 138562837 + TEC TEC MGP_BALBcJ_T0100037.1 MGP_BALBcJ_G0038073.1 mouse_genomes_project 6 128099782 128099856 + Gm23977 snRNA snRNA MGP_BALBcJ_T0098634.1 MGP_BALBcJ_G0036688.1 mouse_genomes_project 6 130937827 130937948 + n-R5s166 rRNA rRNA MGP_BALBcJ_T0004983.1 MGP_BALBcJ_G0004269.1 mouse_genomes_project 6 83981511 83984226 - Gm44089 antisense antisense MGP_BALBcJ_T0079208.1 MGP_BALBcJ_G0031081.1 mouse_genomes_project 6 106662272 106668581 + MGP_BALBcJ_P0079208 Bhlhe40 protein_coding protein_coding MGP_BALBcJ_T0079209.1 MGP_BALBcJ_G0031081.1 mouse_genomes_project 6 106662442 106662978 + Bhlhe40 protein_coding retained_intron MGP_BALBcJ_T0079210.1 MGP_BALBcJ_G0031081.1 mouse_genomes_project 6 106662517 106664343 + MGP_BALBcJ_P0079210 Bhlhe40 protein_coding protein_coding MGP_BALBcJ_T0079211.1 MGP_BALBcJ_G0031081.1 mouse_genomes_project 6 106664695 106667321 + Bhlhe40 protein_coding retained_intron MGP_BALBcJ_T0080703.1 MGP_BALBcJ_G0031414.1 mouse_genomes_project 6 135698020 135716278 - MGP_BALBcJ_P0080703 Arhgdib protein_coding protein_coding MGP_BALBcJ_T0080704.1 MGP_BALBcJ_G0031414.1 mouse_genomes_project 6 135698020 135716528 - MGP_BALBcJ_P0080704 Arhgdib protein_coding protein_coding MGP_BALBcJ_T0080706.1 MGP_BALBcJ_G0031414.1 mouse_genomes_project 6 135698366 135716666 - MGP_BALBcJ_P0080706 Arhgdib protein_coding protein_coding MGP_BALBcJ_T0080707.1 MGP_BALBcJ_G0031414.1 mouse_genomes_project 6 135698577 135716635 - MGP_BALBcJ_P0080707 Arhgdib protein_coding protein_coding MGP_BALBcJ_T0080708.1 MGP_BALBcJ_G0031414.1 mouse_genomes_project 6 135708159 135714366 - MGP_BALBcJ_P0080708 Arhgdib protein_coding protein_coding MGP_BALBcJ_T0002065.1 MGP_BALBcJ_G0001978.1 mouse_genomes_project 6 86669513 86672686 + TEC TEC MGP_BALBcJ_T0077408.1 MGP_BALBcJ_G0030682.1 mouse_genomes_project 6 45714789 45733621 + Gm44965 protein_coding processed_transcript MGP_BALBcJ_T0077409.1 MGP_BALBcJ_G0030682.1 mouse_genomes_project 6 45714792 45739668 + MGP_BALBcJ_P0077409 Gm44965 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076184.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1394957 1468600 - MGP_BALBcJ_P0076184 Sgce protein_coding protein_coding MGP_BALBcJ_T0076185.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1394957 1468572 - MGP_BALBcJ_P0076185 Sgce protein_coding protein_coding MGP_BALBcJ_T0076186.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1394961 1468603 - MGP_BALBcJ_P0076186 Sgce protein_coding protein_coding MGP_BALBcJ_T0076187.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1394961 1468553 - MGP_BALBcJ_P0076187 Sgce protein_coding protein_coding MGP_BALBcJ_T0076188.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1394991 1468512 - MGP_BALBcJ_P0076188 Sgce protein_coding protein_coding MGP_BALBcJ_T0076189.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1395025 1468584 - MGP_BALBcJ_P0076189 Sgce protein_coding protein_coding MGP_BALBcJ_T0076190.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1395025 1468520 - MGP_BALBcJ_P0076190 Sgce protein_coding protein_coding MGP_BALBcJ_T0076191.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1398316 1468553 - Sgce protein_coding retained_intron MGP_BALBcJ_T0076192.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1409498 1468476 - Sgce protein_coding retained_intron MGP_BALBcJ_T0076193.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1412314 1468466 - Sgce protein_coding processed_transcript MGP_BALBcJ_T0076194.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1412486 1468459 - MGP_BALBcJ_P0076194 Sgce protein_coding nonsense_mediated_decay MGP_BALBcJ_T0076195.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1428518 1433209 - Sgce protein_coding retained_intron MGP_BALBcJ_T0076196.1 MGP_BALBcJ_G0030411.1 mouse_genomes_project 6 1458503 1461569 - Sgce protein_coding retained_intron MGP_BALBcJ_T0100023.1 MGP_BALBcJ_G0038059.1 mouse_genomes_project 6 101886419 101886485 - Gm25656 snRNA snRNA MGP_BALBcJ_T0015316.1 MGP_BALBcJ_G0013413.1 mouse_genomes_project 6 46434401 46434966 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002101.1 MGP_BALBcJ_G0002014.1 mouse_genomes_project 6 99407024 99409891 - TEC TEC MGP_BALBcJ_T0080548.1 MGP_BALBcJ_G0031365.1 mouse_genomes_project 6 131064869 131065799 - MGP_BALBcJ_P0080548 Tas2r122 protein_coding protein_coding MGP_BALBcJ_T0015636.1 MGP_BALBcJ_G0013733.1 mouse_genomes_project 6 138850941 138851447 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077920.1 MGP_BALBcJ_G0030821.1 mouse_genomes_project 6 64233005 64234041 - MGP_BALBcJ_P0077920 Vmn1r38 protein_coding protein_coding MGP_BALBcJ_T0008590.1 MGP_BALBcJ_G0006941.1 mouse_genomes_project 6 52391039 52403779 + Gm43995 lincRNA lincRNA MGP_BALBcJ_T0077890.1 MGP_BALBcJ_G0030809.1 mouse_genomes_project 6 62853742 62920661 + MGP_BALBcJ_P0077890 C130060K24Rik protein_coding protein_coding MGP_BALBcJ_T0077891.1 MGP_BALBcJ_G0030809.1 mouse_genomes_project 6 62853931 62925846 + MGP_BALBcJ_P0077891 C130060K24Rik protein_coding protein_coding MGP_BALBcJ_T0077892.1 MGP_BALBcJ_G0030809.1 mouse_genomes_project 6 62908807 62920689 + MGP_BALBcJ_P0077892 C130060K24Rik protein_coding protein_coding MGP_BALBcJ_T0101747.1 MGP_BALBcJ_G0039709.1 mouse_genomes_project 6 88114165 88217379 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0079779.1 MGP_BALBcJ_G0031181.1 mouse_genomes_project 6 118205252 118206321 + MGP_BALBcJ_P0079779 D330020A13Rik protein_coding protein_coding MGP_BALBcJ_T0080536.1 MGP_BALBcJ_G0031354.1 mouse_genomes_project 6 130020370 130021460 - MGP_BALBcJ_P0080536 Tas2r130 protein_coding protein_coding MGP_BALBcJ_T0002172.1 MGP_BALBcJ_G0002084.1 mouse_genomes_project 6 144033808 144036369 - TEC TEC MGP_BALBcJ_T0008570.1 MGP_BALBcJ_G0006927.1 mouse_genomes_project 6 47954856 47958816 - Gm44109 lincRNA lincRNA MGP_BALBcJ_T0101276.1 MGP_BALBcJ_G0039312.1 mouse_genomes_project 6 91545847 91545977 + Gm22312 snoRNA snoRNA MGP_BALBcJ_T0005023.1 MGP_BALBcJ_G0004292.1 mouse_genomes_project 6 99142578 99276476 + Gm43948 antisense antisense MGP_BALBcJ_T0076997.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34943986 34947068 - Atp6v0a4 protein_coding processed_transcript MGP_BALBcJ_T0076998.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34943986 35005346 - MGP_BALBcJ_P0076998 Atp6v0a4 protein_coding protein_coding MGP_BALBcJ_T0076999.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34943986 35020269 - MGP_BALBcJ_P0076999 Atp6v0a4 protein_coding protein_coding MGP_BALBcJ_T0077000.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34946787 34951002 - Atp6v0a4 protein_coding retained_intron MGP_BALBcJ_T0077001.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34974444 34978902 - Atp6v0a4 protein_coding retained_intron MGP_BALBcJ_T0077002.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34984536 34993004 - Atp6v0a4 protein_coding retained_intron MGP_BALBcJ_T0077003.1 MGP_BALBcJ_G0030563.1 mouse_genomes_project 6 34989497 35020172 - Atp6v0a4 protein_coding retained_intron MGP_BALBcJ_T0076520.1 MGP_BALBcJ_G0030474.1 mouse_genomes_project 6 20711950 20712850 - MGP_BALBcJ_P0076520 Tas2r118 protein_coding protein_coding MGP_BALBcJ_T0002075.1 MGP_BALBcJ_G0001988.1 mouse_genomes_project 6 89197478 89200307 - TEC TEC MGP_BALBcJ_T0008591.1 MGP_BALBcJ_G0006942.1 mouse_genomes_project 6 52630832 52646096 + 6430584L05Rik lincRNA lincRNA MGP_BALBcJ_T0080923.1 MGP_BALBcJ_G0031455.1 mouse_genomes_project 6 141958135 142009922 + MGP_BALBcJ_P0080923 Etnk1 protein_coding protein_coding MGP_BALBcJ_T0080924.1 MGP_BALBcJ_G0031455.1 mouse_genomes_project 6 141958144 141999796 + MGP_BALBcJ_P0080924 Etnk1 protein_coding protein_coding MGP_BALBcJ_T0080925.1 MGP_BALBcJ_G0031455.1 mouse_genomes_project 6 141958168 141983410 + Etnk1 protein_coding retained_intron MGP_BALBcJ_T0080926.1 MGP_BALBcJ_G0031455.1 mouse_genomes_project 6 141958168 142023732 + MGP_BALBcJ_P0080926 Etnk1 protein_coding protein_coding MGP_BALBcJ_T0000178.1 MGP_BALBcJ_G0000135.1 mouse_genomes_project 6 67673468 67674030 - MGP_BALBcJ_P0000178 Igkv5-37 IG_V_gene IG_V_gene MGP_BALBcJ_T0005056.1 MGP_BALBcJ_G0004317.1 mouse_genomes_project 6 122800639 122803896 - Gm15884 antisense antisense MGP_BALBcJ_T0011598.1 MGP_BALBcJ_G0009723.1 mouse_genomes_project 6 3543604 3543784 + Gm27699 misc_RNA misc_RNA MGP_BALBcJ_T0002168.1 MGP_BALBcJ_G0002080.1 mouse_genomes_project 6 140147412 140151247 + TEC TEC MGP_BALBcJ_T0008675.1 MGP_BALBcJ_G0007007.1 mouse_genomes_project 6 99895523 99902379 + Gm44176 lincRNA lincRNA MGP_BALBcJ_T0080686.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135543702 135563007 - MGP_BALBcJ_P0080686 Wbp11 protein_coding protein_coding MGP_BALBcJ_T0080687.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135548582 135552969 - MGP_BALBcJ_P0080687 Wbp11 protein_coding protein_coding MGP_BALBcJ_T0080688.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135548807 135562910 - MGP_BALBcJ_P0080688 Wbp11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0080689.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135551491 135562917 - Wbp11 protein_coding retained_intron MGP_BALBcJ_T0080690.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135555928 135562909 - Wbp11 protein_coding retained_intron MGP_BALBcJ_T0080691.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135556680 135561049 - Wbp11 protein_coding retained_intron MGP_BALBcJ_T0080692.1 MGP_BALBcJ_G0031409.1 mouse_genomes_project 6 135557088 135562510 - MGP_BALBcJ_P0080692 Wbp11 protein_coding protein_coding MGP_BALBcJ_T0000198.1 MGP_BALBcJ_G0000149.1 mouse_genomes_project 6 68422860 68423458 + MGP_BALBcJ_P0000198 IG_V_gene IG_V_gene MGP_BALBcJ_T0000199.1 MGP_BALBcJ_G0000149.1 mouse_genomes_project 6 68422860 68423458 + MGP_BALBcJ_P0000199 IG_V_gene IG_V_gene MGP_BALBcJ_T0015553.1 MGP_BALBcJ_G0013650.1 mouse_genomes_project 6 120325255 120325494 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0077172.1 MGP_BALBcJ_G0030612.1 mouse_genomes_project 6 38491861 38495154 + MGP_BALBcJ_P0077172 Prss2 protein_coding protein_coding MGP_BALBcJ_T0077208.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39236682 39254262 + MGP_BALBcJ_P0077208 Casp2 protein_coding protein_coding MGP_BALBcJ_T0077209.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39236753 39240876 + Casp2 protein_coding retained_intron MGP_BALBcJ_T0077210.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39236817 39252246 + MGP_BALBcJ_P0077210 Casp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0077211.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39239088 39239728 + Casp2 protein_coding processed_transcript MGP_BALBcJ_T0077212.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39239707 39241361 + Casp2 protein_coding retained_intron MGP_BALBcJ_T0077213.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39241038 39251651 + Casp2 protein_coding processed_transcript MGP_BALBcJ_T0077214.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39248240 39252287 + Casp2 protein_coding retained_intron MGP_BALBcJ_T0077215.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39251390 39252244 + Casp2 protein_coding processed_transcript MGP_BALBcJ_T0077216.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39251534 39252395 + Casp2 protein_coding processed_transcript MGP_BALBcJ_T0077217.1 MGP_BALBcJ_G0030628.1 mouse_genomes_project 6 39251560 39252521 + Casp2 protein_coding processed_transcript MGP_BALBcJ_T0010912.1 MGP_BALBcJ_G0009037.1 mouse_genomes_project 7 140654551 140654623 - Mir202 miRNA miRNA MGP_BALBcJ_T0100080.1 MGP_BALBcJ_G0038116.1 mouse_genomes_project 7 91509542 91509687 - Gm23928 snRNA snRNA MGP_BALBcJ_T0085631.1 MGP_BALBcJ_G0032717.1 mouse_genomes_project 7 104983530 104984487 - MGP_BALBcJ_P0085631 Olfr668 protein_coding protein_coding MGP_BALBcJ_T0082881.1 MGP_BALBcJ_G0031985.1 mouse_genomes_project 7 28505502 28517916 + MGP_BALBcJ_P0082881 Zfp382 protein_coding protein_coding MGP_BALBcJ_T0082882.1 MGP_BALBcJ_G0031985.1 mouse_genomes_project 7 28505530 28514079 + MGP_BALBcJ_P0082882 Zfp382 protein_coding protein_coding MGP_BALBcJ_T0082883.1 MGP_BALBcJ_G0031985.1 mouse_genomes_project 7 28508442 28516796 + Zfp382 protein_coding retained_intron MGP_BALBcJ_T0009026.1 MGP_BALBcJ_G0007263.1 mouse_genomes_project 7 131743979 131748121 + 1700029B22Rik lincRNA lincRNA MGP_BALBcJ_T0009027.1 MGP_BALBcJ_G0007263.1 mouse_genomes_project 7 131743984 131748121 + 1700029B22Rik lincRNA lincRNA MGP_BALBcJ_T0009028.1 MGP_BALBcJ_G0007263.1 mouse_genomes_project 7 131744022 131748099 + 1700029B22Rik lincRNA lincRNA MGP_BALBcJ_T0083672.1 MGP_BALBcJ_G0032166.1 mouse_genomes_project 7 44066997 44078460 + MGP_BALBcJ_P0083672 Izumo2 protein_coding protein_coding MGP_BALBcJ_T0101352.1 MGP_BALBcJ_G0039388.1 mouse_genomes_project 7 110392833 110393017 + Snora23 snoRNA snoRNA MGP_BALBcJ_T0005174.1 MGP_BALBcJ_G0004406.1 mouse_genomes_project 7 33388521 33397510 + Gm12781 antisense antisense MGP_BALBcJ_T0102700.1 MGP_BALBcJ_G0040515.1 mouse_genomes_project 7 11818318 11821573 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015771.1 MGP_BALBcJ_G0013868.1 mouse_genomes_project 7 41700792 41701274 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015783.1 MGP_BALBcJ_G0013880.1 mouse_genomes_project 7 47795497 47796134 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008909.1 MGP_BALBcJ_G0007192.1 mouse_genomes_project 7 74691734 74739605 + Gm44904 lincRNA lincRNA MGP_BALBcJ_T0084429.1 MGP_BALBcJ_G0032355.1 mouse_genomes_project 7 68339371 68351569 - MGP_BALBcJ_P0084429 Arrdc4 protein_coding protein_coding MGP_BALBcJ_T0084430.1 MGP_BALBcJ_G0032355.1 mouse_genomes_project 7 68343838 68347234 - Arrdc4 protein_coding retained_intron MGP_BALBcJ_T0084431.1 MGP_BALBcJ_G0032355.1 mouse_genomes_project 7 68343930 68351516 - MGP_BALBcJ_P0084431 Arrdc4 protein_coding protein_coding MGP_BALBcJ_T0086249.1 MGP_BALBcJ_G0032917.1 mouse_genomes_project 7 120880775 120944781 + MGP_BALBcJ_P0086249 Abca16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086250.1 MGP_BALBcJ_G0032917.1 mouse_genomes_project 7 120892542 121009905 + MGP_BALBcJ_P0086250 Abca16 protein_coding protein_coding MGP_BALBcJ_T0086251.1 MGP_BALBcJ_G0032917.1 mouse_genomes_project 7 120892542 121009905 + MGP_BALBcJ_P0086251 Abca16 protein_coding protein_coding MGP_BALBcJ_T0086252.1 MGP_BALBcJ_G0032917.1 mouse_genomes_project 7 120940503 120957877 + Abca16 protein_coding retained_intron MGP_BALBcJ_T0008820.1 MGP_BALBcJ_G0007124.1 mouse_genomes_project 7 34856244 34859385 + Gm45143 lincRNA lincRNA MGP_BALBcJ_T0002213.1 MGP_BALBcJ_G0002125.1 mouse_genomes_project 7 38731861 38734844 + TEC TEC MGP_BALBcJ_T0015696.1 MGP_BALBcJ_G0013793.1 mouse_genomes_project 7 11356051 11359622 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005224.1 MGP_BALBcJ_G0004442.1 mouse_genomes_project 7 83425356 83426745 + 2310044K18Rik antisense antisense MGP_BALBcJ_T0015703.1 MGP_BALBcJ_G0013800.1 mouse_genomes_project 7 13462152 13463112 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081467.1 MGP_BALBcJ_G0031551.1 mouse_genomes_project 7 1916721 1919473 + MGP_BALBcJ_P0081467 Nat14 protein_coding protein_coding MGP_BALBcJ_T0084237.1 MGP_BALBcJ_G0032314.1 mouse_genomes_project 7 59283284 59321665 - MGP_BALBcJ_P0084237 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084238.1 MGP_BALBcJ_G0032314.1 mouse_genomes_project 7 59283284 59321665 - MGP_BALBcJ_P0084238 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084239.1 MGP_BALBcJ_G0032314.1 mouse_genomes_project 7 59293098 59297037 - protein_coding processed_transcript MGP_BALBcJ_T0084240.1 MGP_BALBcJ_G0032314.1 mouse_genomes_project 7 59296870 59297293 - protein_coding processed_transcript MGP_BALBcJ_T0084910.1 MGP_BALBcJ_G0032460.1 mouse_genomes_project 7 86166887 86167899 - MGP_BALBcJ_P0084910 Olfr307 protein_coding protein_coding MGP_BALBcJ_T0010855.1 MGP_BALBcJ_G0008980.1 mouse_genomes_project 7 53817060 53817247 - Gm25956 miRNA miRNA MGP_BALBcJ_T0085771.1 MGP_BALBcJ_G0032768.1 mouse_genomes_project 7 107218221 107219253 - MGP_BALBcJ_P0085771 protein_coding protein_coding MGP_BALBcJ_T0008943.1 MGP_BALBcJ_G0007209.1 mouse_genomes_project 7 92495284 92502898 + Gm26944 lincRNA lincRNA MGP_BALBcJ_T0082287.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23051924 23115646 - MGP_BALBcJ_P0082287 Grik5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082288.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23051924 23115891 - MGP_BALBcJ_P0082288 Grik5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082289.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23051924 23115837 - MGP_BALBcJ_P0082289 Grik5 protein_coding protein_coding MGP_BALBcJ_T0082290.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23089470 23103147 - Grik5 protein_coding retained_intron MGP_BALBcJ_T0082291.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23103827 23108787 - Grik5 protein_coding retained_intron MGP_BALBcJ_T0082292.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23104012 23104710 - Grik5 protein_coding retained_intron MGP_BALBcJ_T0082293.1 MGP_BALBcJ_G0031838.1 mouse_genomes_project 7 23112153 23115855 - Grik5 protein_coding processed_transcript MGP_BALBcJ_T0086346.1 MGP_BALBcJ_G0032942.1 mouse_genomes_project 7 122663531 122680190 - MGP_BALBcJ_P0086346 Ern2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086347.1 MGP_BALBcJ_G0032942.1 mouse_genomes_project 7 122663578 122680187 - MGP_BALBcJ_P0086347 Ern2 protein_coding protein_coding MGP_BALBcJ_T0086348.1 MGP_BALBcJ_G0032942.1 mouse_genomes_project 7 122663704 122677593 - MGP_BALBcJ_P0086348 Ern2 protein_coding unknown_likely_coding MGP_BALBcJ_T0015861.1 MGP_BALBcJ_G0013958.1 mouse_genomes_project 7 104474712 104475842 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082780.1 MGP_BALBcJ_G0031959.1 mouse_genomes_project 7 27502554 27506260 + MGP_BALBcJ_P0082780 Ggn protein_coding protein_coding MGP_BALBcJ_T0082781.1 MGP_BALBcJ_G0031959.1 mouse_genomes_project 7 27502724 27506239 + MGP_BALBcJ_P0082781 Ggn protein_coding protein_coding MGP_BALBcJ_T0082513.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25581066 25594834 - MGP_BALBcJ_P0082513 Shkbp1 protein_coding protein_coding MGP_BALBcJ_T0082514.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25581070 25594769 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0082515.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25581070 25594558 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0082516.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25581071 25584506 - Shkbp1 protein_coding processed_transcript MGP_BALBcJ_T0082517.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25581345 25581856 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0082518.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25582082 25587318 - Shkbp1 protein_coding processed_transcript MGP_BALBcJ_T0082519.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25583882 25586340 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0082520.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25586990 25589498 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0082521.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25590525 25594574 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0082522.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25590566 25594737 - Shkbp1 protein_coding processed_transcript MGP_BALBcJ_T0082524.1 MGP_BALBcJ_G0031892.1 mouse_genomes_project 7 25592905 25594586 - Shkbp1 protein_coding retained_intron MGP_BALBcJ_T0086389.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123780423 123872685 - MGP_BALBcJ_P0086389 Arhgap17 protein_coding protein_coding MGP_BALBcJ_T0086390.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123780476 123872720 - MGP_BALBcJ_P0086390 Arhgap17 protein_coding protein_coding MGP_BALBcJ_T0086391.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123780476 123872720 - MGP_BALBcJ_P0086391 Arhgap17 protein_coding protein_coding MGP_BALBcJ_T0086392.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123780480 123872712 - MGP_BALBcJ_P0086392 Arhgap17 protein_coding protein_coding MGP_BALBcJ_T0086393.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123780485 123872737 - MGP_BALBcJ_P0086393 Arhgap17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086394.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123780590 123872719 - MGP_BALBcJ_P0086394 Arhgap17 protein_coding protein_coding MGP_BALBcJ_T0086395.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123784142 123787447 - Arhgap17 protein_coding retained_intron MGP_BALBcJ_T0086396.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123788191 123797796 - Arhgap17 protein_coding retained_intron MGP_BALBcJ_T0086397.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123796484 123872749 - Arhgap17 protein_coding retained_intron MGP_BALBcJ_T0086398.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123822712 123872749 - MGP_BALBcJ_P0086398 Arhgap17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086399.1 MGP_BALBcJ_G0032949.1 mouse_genomes_project 7 123871610 123872710 - Arhgap17 protein_coding retained_intron MGP_BALBcJ_T0086513.1 MGP_BALBcJ_G0032970.1 mouse_genomes_project 7 126964543 126968582 + MGP_BALBcJ_P0086513 Tufm protein_coding protein_coding MGP_BALBcJ_T0086515.1 MGP_BALBcJ_G0032970.1 mouse_genomes_project 7 126964560 126968586 + MGP_BALBcJ_P0086515 Tufm protein_coding protein_coding MGP_BALBcJ_T0086516.1 MGP_BALBcJ_G0032970.1 mouse_genomes_project 7 126964811 126966129 + Tufm protein_coding processed_transcript MGP_BALBcJ_T0086517.1 MGP_BALBcJ_G0032970.1 mouse_genomes_project 7 126965796 126966988 + Tufm protein_coding retained_intron MGP_BALBcJ_T0086518.1 MGP_BALBcJ_G0032970.1 mouse_genomes_project 7 126965868 126967230 + MGP_BALBcJ_P0086518 Tufm protein_coding protein_coding MGP_BALBcJ_T0086519.1 MGP_BALBcJ_G0032970.1 mouse_genomes_project 7 126967225 126968084 + MGP_BALBcJ_P0086519 Tufm protein_coding protein_coding MGP_BALBcJ_T0086663.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127340297 127350609 - MGP_BALBcJ_P0086663 protein_coding protein_coding MGP_BALBcJ_T0086664.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127340917 127350801 - MGP_BALBcJ_P0086664 protein_coding protein_coding MGP_BALBcJ_T0086665.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127341770 127351715 - protein_coding retained_intron MGP_BALBcJ_T0086666.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127341917 127351198 - MGP_BALBcJ_P0086666 protein_coding protein_coding MGP_BALBcJ_T0086667.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127342019 127351070 - protein_coding processed_transcript MGP_BALBcJ_T0086668.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127342107 127351123 - MGP_BALBcJ_P0086668 protein_coding protein_coding MGP_BALBcJ_T0086669.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127342155 127347068 - MGP_BALBcJ_P0086669 protein_coding protein_coding MGP_BALBcJ_T0086670.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127342232 127351699 - MGP_BALBcJ_P0086670 protein_coding protein_coding MGP_BALBcJ_T0086671.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127342267 127351121 - MGP_BALBcJ_P0086671 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086672.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127345538 127351207 - protein_coding retained_intron MGP_BALBcJ_T0086673.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127347013 127351129 - protein_coding processed_transcript MGP_BALBcJ_T0086674.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127347036 127351182 - MGP_BALBcJ_P0086674 protein_coding protein_coding MGP_BALBcJ_T0086675.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127347051 127350986 - MGP_BALBcJ_P0086675 protein_coding protein_coding MGP_BALBcJ_T0086676.1 MGP_BALBcJ_G0032992.1 mouse_genomes_project 7 127350577 127351186 - protein_coding processed_transcript MGP_BALBcJ_T0018300.1 MGP_BALBcJ_G0015599.1 mouse_genomes_project 7 25923327 25926525 - Gm44684 processed_transcript processed_transcript MGP_BALBcJ_T0085170.1 MGP_BALBcJ_G0032531.1 mouse_genomes_project 7 99153715 99173238 - MGP_BALBcJ_P0085170 Mogat2 protein_coding protein_coding MGP_BALBcJ_T0085171.1 MGP_BALBcJ_G0032531.1 mouse_genomes_project 7 99161236 99173213 - Mogat2 protein_coding processed_transcript MGP_BALBcJ_T0081265.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 574379 576323 + MGP_BALBcJ_P0081265 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081266.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 574891 582476 + MGP_BALBcJ_P0081266 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081267.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575118 576703 + MGP_BALBcJ_P0081267 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081268.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575279 582338 + MGP_BALBcJ_P0081268 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081269.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575281 582382 + MGP_BALBcJ_P0081269 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081270.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575317 577142 + Tsen34 protein_coding retained_intron MGP_BALBcJ_T0081271.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575325 582382 + MGP_BALBcJ_P0081271 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081272.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575345 576726 + MGP_BALBcJ_P0081272 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081273.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 575814 576610 + MGP_BALBcJ_P0081273 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081274.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 576024 581965 + MGP_BALBcJ_P0081274 Tsen34 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081275.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 576039 582382 + MGP_BALBcJ_P0081275 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0081276.1 MGP_BALBcJ_G0031512.1 mouse_genomes_project 7 576705 581965 + MGP_BALBcJ_P0081276 Tsen34 protein_coding protein_coding MGP_BALBcJ_T0015718.1 MGP_BALBcJ_G0013815.1 mouse_genomes_project 7 22033089 22033398 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083903.1 MGP_BALBcJ_G0032225.1 mouse_genomes_project 7 45009676 45015049 + MGP_BALBcJ_P0083903 Izumo1 protein_coding protein_coding MGP_BALBcJ_T0083904.1 MGP_BALBcJ_G0032225.1 mouse_genomes_project 7 45012254 45016637 + Izumo1 protein_coding retained_intron MGP_BALBcJ_T0081804.1 MGP_BALBcJ_G0031693.1 mouse_genomes_project 7 14301075 14305387 + MGP_BALBcJ_P0081804 Ceacam9 protein_coding protein_coding MGP_BALBcJ_T0081805.1 MGP_BALBcJ_G0031693.1 mouse_genomes_project 7 14301104 14304469 + MGP_BALBcJ_P0081805 Ceacam9 protein_coding protein_coding MGP_BALBcJ_T0101763.1 MGP_BALBcJ_G0039717.1 mouse_genomes_project 7 126632552 126636923 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101764.1 MGP_BALBcJ_G0039717.1 mouse_genomes_project 7 126634164 126635121 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0015860.1 MGP_BALBcJ_G0013957.1 mouse_genomes_project 7 104407851 104409053 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087894.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144475755 144481555 - Osbpl5 protein_coding retained_intron MGP_BALBcJ_T0087895.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144475755 144527758 - MGP_BALBcJ_P0087895 Osbpl5 protein_coding protein_coding MGP_BALBcJ_T0087896.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144475755 144529380 - MGP_BALBcJ_P0087896 Osbpl5 protein_coding protein_coding MGP_BALBcJ_T0087897.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144481257 144482081 - Osbpl5 protein_coding retained_intron MGP_BALBcJ_T0087898.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144490456 144492521 - Osbpl5 protein_coding retained_intron MGP_BALBcJ_T0087899.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144496452 144545229 - MGP_BALBcJ_P0087899 Osbpl5 protein_coding protein_coding MGP_BALBcJ_T0087900.1 MGP_BALBcJ_G0033263.1 mouse_genomes_project 7 144500896 144527716 - Osbpl5 protein_coding processed_transcript MGP_BALBcJ_T0083939.1 MGP_BALBcJ_G0032237.1 mouse_genomes_project 7 45122267 45151994 - MGP_BALBcJ_P0083939 Sult2b1 protein_coding protein_coding MGP_BALBcJ_T0083940.1 MGP_BALBcJ_G0032237.1 mouse_genomes_project 7 45122284 45134785 - MGP_BALBcJ_P0083940 Sult2b1 protein_coding protein_coding MGP_BALBcJ_T0083941.1 MGP_BALBcJ_G0032237.1 mouse_genomes_project 7 45127430 45134785 - MGP_BALBcJ_P0083941 Sult2b1 protein_coding protein_coding MGP_BALBcJ_T0083942.1 MGP_BALBcJ_G0032237.1 mouse_genomes_project 7 45127464 45135048 - Sult2b1 protein_coding processed_transcript MGP_BALBcJ_T0083943.1 MGP_BALBcJ_G0032237.1 mouse_genomes_project 7 45150855 45151912 - Sult2b1 protein_coding processed_transcript MGP_BALBcJ_T0002255.1 MGP_BALBcJ_G0002166.1 mouse_genomes_project 7 75151984 75153380 + TEC TEC MGP_BALBcJ_T0015865.1 MGP_BALBcJ_G0013962.1 mouse_genomes_project 7 108178812 108179277 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085552.1 MGP_BALBcJ_G0032668.1 mouse_genomes_project 7 103998009 103999544 - MGP_BALBcJ_P0085552 Hbb-bh1 protein_coding protein_coding MGP_BALBcJ_T0085626.1 MGP_BALBcJ_G0032713.1 mouse_genomes_project 7 104797497 104802826 - MGP_BALBcJ_P0085626 protein_coding protein_coding MGP_BALBcJ_T0085627.1 MGP_BALBcJ_G0032713.1 mouse_genomes_project 7 104797497 104802820 - MGP_BALBcJ_P0085627 protein_coding protein_coding MGP_BALBcJ_T0102712.1 MGP_BALBcJ_G0040527.1 mouse_genomes_project 7 14785764 14786755 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087669.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142203559 142209102 + MGP_BALBcJ_P0087669 Cracr2b protein_coding protein_coding MGP_BALBcJ_T0087670.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142204360 142207486 + MGP_BALBcJ_P0087670 Cracr2b protein_coding protein_coding MGP_BALBcJ_T0087671.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142204425 142205919 + MGP_BALBcJ_P0087671 Cracr2b protein_coding protein_coding MGP_BALBcJ_T0087672.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142205567 142207186 + MGP_BALBcJ_P0087672 Cracr2b protein_coding protein_coding MGP_BALBcJ_T0087673.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142205867 142208561 + MGP_BALBcJ_P0087673 Cracr2b protein_coding protein_coding MGP_BALBcJ_T0087674.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142206500 142207289 + Cracr2b protein_coding retained_intron MGP_BALBcJ_T0087675.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142207550 142208166 + Cracr2b protein_coding retained_intron MGP_BALBcJ_T0087676.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142207684 142208847 + Cracr2b protein_coding retained_intron MGP_BALBcJ_T0087677.1 MGP_BALBcJ_G0033216.1 mouse_genomes_project 7 142208162 142209102 + MGP_BALBcJ_P0087677 Cracr2b protein_coding protein_coding MGP_BALBcJ_T0083090.1 MGP_BALBcJ_G0032032.1 mouse_genomes_project 7 29255611 29259727 - MGP_BALBcJ_P0083090 Ffar1 protein_coding protein_coding MGP_BALBcJ_T0083965.1 MGP_BALBcJ_G0032243.1 mouse_genomes_project 7 45271617 45273096 + Kdelr1 protein_coding processed_transcript MGP_BALBcJ_T0083966.1 MGP_BALBcJ_G0032243.1 mouse_genomes_project 7 45271741 45282476 + MGP_BALBcJ_P0083966 Kdelr1 protein_coding protein_coding MGP_BALBcJ_T0083967.1 MGP_BALBcJ_G0032243.1 mouse_genomes_project 7 45280179 45282095 + Kdelr1 protein_coding processed_transcript MGP_BALBcJ_T0084858.1 MGP_BALBcJ_G0032436.1 mouse_genomes_project 7 82626789 82630834 + MGP_BALBcJ_P0084858 Mex3b protein_coding protein_coding MGP_BALBcJ_T0015769.1 MGP_BALBcJ_G0013866.1 mouse_genomes_project 7 40776499 40777149 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101365.1 MGP_BALBcJ_G0039401.1 mouse_genomes_project 7 142125330 142125460 - Gm25725 snoRNA snoRNA MGP_BALBcJ_T0018346.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73167811 73187616 - 1810026B05Rik processed_transcript lincRNA MGP_BALBcJ_T0018347.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73172642 73187465 - 1810026B05Rik processed_transcript lincRNA MGP_BALBcJ_T0018348.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73172643 73187368 - 1810026B05Rik processed_transcript lincRNA MGP_BALBcJ_T0018349.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73172648 73176021 - 1810026B05Rik processed_transcript retained_intron MGP_BALBcJ_T0018350.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73172849 73185141 - 1810026B05Rik processed_transcript lincRNA MGP_BALBcJ_T0018351.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73172870 73187194 - 1810026B05Rik processed_transcript lincRNA MGP_BALBcJ_T0018352.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73172912 73187469 - 1810026B05Rik processed_transcript lincRNA MGP_BALBcJ_T0018353.1 MGP_BALBcJ_G0015615.1 mouse_genomes_project 7 73184368 73187607 - 1810026B05Rik processed_transcript retained_intron MGP_BALBcJ_T0085762.1 MGP_BALBcJ_G0032760.1 mouse_genomes_project 7 107112514 107113465 - MGP_BALBcJ_P0085762 Olfr699 protein_coding protein_coding MGP_BALBcJ_T0085543.1 MGP_BALBcJ_G0032661.1 mouse_genomes_project 7 103866542 103867487 - MGP_BALBcJ_P0085543 Olfr629 protein_coding protein_coding MGP_BALBcJ_T0084216.1 MGP_BALBcJ_G0032310.1 mouse_genomes_project 7 56929655 57036013 - MGP_BALBcJ_P0084216 Gabra5 protein_coding unknown_likely_coding MGP_BALBcJ_T0086283.1 MGP_BALBcJ_G0032925.1 mouse_genomes_project 7 121453861 121487243 + MGP_BALBcJ_P0086283 Mfsd13b protein_coding protein_coding MGP_BALBcJ_T0086284.1 MGP_BALBcJ_G0032925.1 mouse_genomes_project 7 121453877 121462826 + MGP_BALBcJ_P0086284 Mfsd13b protein_coding protein_coding MGP_BALBcJ_T0086285.1 MGP_BALBcJ_G0032925.1 mouse_genomes_project 7 121453880 121460430 + MGP_BALBcJ_P0086285 Mfsd13b protein_coding protein_coding MGP_BALBcJ_T0086286.1 MGP_BALBcJ_G0032925.1 mouse_genomes_project 7 121463180 121487243 + MGP_BALBcJ_P0086286 Mfsd13b protein_coding protein_coding MGP_BALBcJ_T0084392.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66808931 66951436 - MGP_BALBcJ_P0084392 Mef2a protein_coding protein_coding MGP_BALBcJ_T0084393.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66809686 66951436 - MGP_BALBcJ_P0084393 Mef2a protein_coding protein_coding MGP_BALBcJ_T0084394.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66809852 66892346 - MGP_BALBcJ_P0084394 Mef2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084395.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66811807 66951436 - MGP_BALBcJ_P0084395 Mef2a protein_coding protein_coding MGP_BALBcJ_T0084396.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66811915 66951436 - MGP_BALBcJ_P0084396 Mef2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084397.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66811975 66951436 - MGP_BALBcJ_P0084397 Mef2a protein_coding protein_coding MGP_BALBcJ_T0084398.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66830435 66951436 - MGP_BALBcJ_P0084398 Mef2a protein_coding protein_coding MGP_BALBcJ_T0084399.1 MGP_BALBcJ_G0032349.1 mouse_genomes_project 7 66927525 66951405 - Mef2a protein_coding processed_transcript MGP_BALBcJ_T0008899.1 MGP_BALBcJ_G0007184.1 mouse_genomes_project 7 73255461 73256196 - Gm44738 lincRNA lincRNA MGP_BALBcJ_T0098393.1 MGP_BALBcJ_G0036447.1 mouse_genomes_project 7 108645884 108646830 - pseudogene pseudogene MGP_BALBcJ_T0009025.1 MGP_BALBcJ_G0007262.1 mouse_genomes_project 7 131314543 131316558 - Etos1 lincRNA lincRNA MGP_BALBcJ_T0010889.1 MGP_BALBcJ_G0009014.1 mouse_genomes_project 7 99488233 99488328 + Mir326 miRNA miRNA MGP_BALBcJ_T0008892.1 MGP_BALBcJ_G0007179.1 mouse_genomes_project 7 72744328 72746438 + 4933435G04Rik lincRNA lincRNA MGP_BALBcJ_T0081335.1 MGP_BALBcJ_G0031523.1 mouse_genomes_project 7 1218730 1224419 + MGP_BALBcJ_P0081335 Lilra5 protein_coding protein_coding MGP_BALBcJ_T0098389.1 MGP_BALBcJ_G0036443.1 mouse_genomes_project 7 92921791 92923623 + pseudogene pseudogene MGP_BALBcJ_T0086370.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123625464 123664558 + Tnrc6a protein_coding processed_transcript MGP_BALBcJ_T0086371.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123625756 123696465 + MGP_BALBcJ_P0086371 Tnrc6a protein_coding protein_coding MGP_BALBcJ_T0086372.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123625760 123697774 + MGP_BALBcJ_P0086372 Tnrc6a protein_coding protein_coding MGP_BALBcJ_T0086373.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123625835 123679586 + MGP_BALBcJ_P0086373 Tnrc6a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086374.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123671015 123672798 + Tnrc6a protein_coding retained_intron MGP_BALBcJ_T0086375.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123672524 123696456 + MGP_BALBcJ_P0086375 Tnrc6a protein_coding protein_coding MGP_BALBcJ_T0086376.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123673280 123677592 + Tnrc6a protein_coding retained_intron MGP_BALBcJ_T0086377.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123673539 123676326 + Tnrc6a protein_coding retained_intron MGP_BALBcJ_T0086378.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123674751 123676091 + Tnrc6a protein_coding retained_intron MGP_BALBcJ_T0086379.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123676108 123682515 + MGP_BALBcJ_P0086379 Tnrc6a protein_coding protein_coding MGP_BALBcJ_T0086380.1 MGP_BALBcJ_G0032947.1 mouse_genomes_project 7 123681814 123696233 + Tnrc6a protein_coding retained_intron MGP_BALBcJ_T0018361.1 MGP_BALBcJ_G0015620.1 mouse_genomes_project 7 96818736 96855743 - C230038L03Rik processed_transcript antisense MGP_BALBcJ_T0018362.1 MGP_BALBcJ_G0015620.1 mouse_genomes_project 7 96830423 96858851 - C230038L03Rik processed_transcript processed_transcript MGP_BALBcJ_T0018363.1 MGP_BALBcJ_G0015620.1 mouse_genomes_project 7 96856286 96860191 - C230038L03Rik processed_transcript antisense MGP_BALBcJ_T0018364.1 MGP_BALBcJ_G0015620.1 mouse_genomes_project 7 96856618 96860597 - C230038L03Rik processed_transcript antisense MGP_BALBcJ_T0084175.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55408691 55460055 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0084176.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55409017 55501231 + MGP_BALBcJ_P0084176 Cyfip1 protein_coding protein_coding MGP_BALBcJ_T0084177.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55409018 55445483 + MGP_BALBcJ_P0084177 Cyfip1 protein_coding protein_coding MGP_BALBcJ_T0084178.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55409152 55499128 + MGP_BALBcJ_P0084178 Cyfip1 protein_coding protein_coding MGP_BALBcJ_T0084179.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55409196 55494422 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0084180.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55409201 55499101 + MGP_BALBcJ_P0084180 Cyfip1 protein_coding protein_coding MGP_BALBcJ_T0084181.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55439340 55492596 + MGP_BALBcJ_P0084181 Cyfip1 protein_coding protein_coding MGP_BALBcJ_T0084182.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55465374 55469363 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0084183.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55465703 55499128 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0084184.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55466448 55472833 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0084185.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55476936 55482338 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0084186.1 MGP_BALBcJ_G0032304.1 mouse_genomes_project 7 55497513 55499101 + Cyfip1 protein_coding retained_intron MGP_BALBcJ_T0015836.1 MGP_BALBcJ_G0013933.1 mouse_genomes_project 7 89940383 89940872 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082846.1 MGP_BALBcJ_G0031975.1 mouse_genomes_project 7 28270265 28282566 - MGP_BALBcJ_P0082846 Zfp27 protein_coding protein_coding MGP_BALBcJ_T0082847.1 MGP_BALBcJ_G0031975.1 mouse_genomes_project 7 28270648 28277402 - MGP_BALBcJ_P0082847 Zfp27 protein_coding protein_coding MGP_BALBcJ_T0082848.1 MGP_BALBcJ_G0031975.1 mouse_genomes_project 7 28270649 28282093 - MGP_BALBcJ_P0082848 Zfp27 protein_coding protein_coding MGP_BALBcJ_T0082849.1 MGP_BALBcJ_G0031975.1 mouse_genomes_project 7 28270649 28282523 - MGP_BALBcJ_P0082849 Zfp27 protein_coding protein_coding MGP_BALBcJ_T0082850.1 MGP_BALBcJ_G0031975.1 mouse_genomes_project 7 28271012 28275749 - MGP_BALBcJ_P0082850 Zfp27 protein_coding protein_coding MGP_BALBcJ_T0082851.1 MGP_BALBcJ_G0031975.1 mouse_genomes_project 7 28277150 28282049 - Zfp27 protein_coding processed_transcript MGP_BALBcJ_T0087445.1 MGP_BALBcJ_G0033162.1 mouse_genomes_project 7 141160419 141163110 + MGP_BALBcJ_P0087445 Olfr533 protein_coding protein_coding MGP_BALBcJ_T0008885.1 MGP_BALBcJ_G0007172.1 mouse_genomes_project 7 71537846 71567324 + 4930441H08Rik lincRNA lincRNA MGP_BALBcJ_T0085560.1 MGP_BALBcJ_G0032676.1 mouse_genomes_project 7 104136754 104140195 + MGP_BALBcJ_P0085560 Olfr635 protein_coding protein_coding MGP_BALBcJ_T0015683.1 MGP_BALBcJ_G0013780.1 mouse_genomes_project 7 3498288 3498498 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082768.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27484999 27488658 - MGP_BALBcJ_P0082768 Fam98c protein_coding protein_coding MGP_BALBcJ_T0082769.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485002 27488698 - MGP_BALBcJ_P0082769 Fam98c protein_coding protein_coding MGP_BALBcJ_T0082770.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485003 27488671 - Fam98c protein_coding retained_intron MGP_BALBcJ_T0082771.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485003 27488691 - Fam98c protein_coding retained_intron MGP_BALBcJ_T0082772.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485003 27488671 - Fam98c protein_coding retained_intron MGP_BALBcJ_T0082773.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485010 27488648 - MGP_BALBcJ_P0082773 Fam98c protein_coding protein_coding MGP_BALBcJ_T0082774.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485045 27488207 - MGP_BALBcJ_P0082774 Fam98c protein_coding protein_coding MGP_BALBcJ_T0082775.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485884 27488722 - MGP_BALBcJ_P0082775 Fam98c protein_coding protein_coding MGP_BALBcJ_T0082776.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485915 27488091 - MGP_BALBcJ_P0082776 Fam98c protein_coding protein_coding MGP_BALBcJ_T0082777.1 MGP_BALBcJ_G0031957.1 mouse_genomes_project 7 27485998 27488691 - Fam98c protein_coding processed_transcript MGP_BALBcJ_T0085489.1 MGP_BALBcJ_G0032611.1 mouse_genomes_project 7 102764524 102774245 + MGP_BALBcJ_P0085489 Olfr558 protein_coding protein_coding MGP_BALBcJ_T0082306.1 MGP_BALBcJ_G0031841.1 mouse_genomes_project 7 23254241 23273947 - MGP_BALBcJ_P0082306 Dedd2 protein_coding unknown_likely_coding MGP_BALBcJ_T0082307.1 MGP_BALBcJ_G0031841.1 mouse_genomes_project 7 23254251 23273908 - Dedd2 protein_coding processed_transcript MGP_BALBcJ_T0082308.1 MGP_BALBcJ_G0031841.1 mouse_genomes_project 7 23271193 23273920 - Dedd2 protein_coding retained_intron MGP_BALBcJ_T0018392.1 MGP_BALBcJ_G0015637.1 mouse_genomes_project 7 140645834 140660159 + Gm16201 processed_transcript processed_transcript MGP_BALBcJ_T0018393.1 MGP_BALBcJ_G0015637.1 mouse_genomes_project 7 140645878 140675924 + Gm16201 processed_transcript processed_transcript MGP_BALBcJ_T0009033.1 MGP_BALBcJ_G0007267.1 mouse_genomes_project 7 135863062 135867203 - 1700120G07Rik lincRNA lincRNA MGP_BALBcJ_T0009034.1 MGP_BALBcJ_G0007267.1 mouse_genomes_project 7 135864199 135867203 - 1700120G07Rik lincRNA lincRNA MGP_BALBcJ_T0011679.1 MGP_BALBcJ_G0009804.1 mouse_genomes_project 7 137197240 137197548 - Gm24444 misc_RNA misc_RNA MGP_BALBcJ_T0087464.1 MGP_BALBcJ_G0033176.1 mouse_genomes_project 7 141556392 141557615 + MGP_BALBcJ_P0087464 Scgb1c1 protein_coding protein_coding MGP_BALBcJ_T0008957.1 MGP_BALBcJ_G0007220.1 mouse_genomes_project 7 99723572 99725107 - F730035P03Rik lincRNA lincRNA MGP_BALBcJ_T0008802.1 MGP_BALBcJ_G0007107.1 mouse_genomes_project 7 27387728 27397279 + Gm26604 lincRNA lincRNA MGP_BALBcJ_T0082976.1 MGP_BALBcJ_G0032009.1 mouse_genomes_project 7 28925080 28938744 - protein_coding retained_intron MGP_BALBcJ_T0082977.1 MGP_BALBcJ_G0032009.1 mouse_genomes_project 7 28931465 28938740 - MGP_BALBcJ_P0082977 protein_coding protein_coding MGP_BALBcJ_T0081700.1 MGP_BALBcJ_G0031653.1 mouse_genomes_project 7 10793003 10821602 + MGP_BALBcJ_P0081700 Bsph1 protein_coding protein_coding MGP_BALBcJ_T0081701.1 MGP_BALBcJ_G0031653.1 mouse_genomes_project 7 10793018 10821532 + MGP_BALBcJ_P0081701 Bsph1 protein_coding protein_coding MGP_BALBcJ_T0102682.1 MGP_BALBcJ_G0040497.1 mouse_genomes_project 7 9176871 9177263 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085768.1 MGP_BALBcJ_G0032765.1 mouse_genomes_project 7 107192695 107193643 + MGP_BALBcJ_P0085768 Olfr704 protein_coding protein_coding MGP_BALBcJ_T0082610.1 MGP_BALBcJ_G0031917.1 mouse_genomes_project 7 26442474 26451910 + MGP_BALBcJ_P0082610 Fbl protein_coding protein_coding MGP_BALBcJ_T0086406.1 MGP_BALBcJ_G0032951.1 mouse_genomes_project 7 123964996 123970710 + MGP_BALBcJ_P0086406 Aqp8 protein_coding protein_coding MGP_BALBcJ_T0086407.1 MGP_BALBcJ_G0032951.1 mouse_genomes_project 7 123965017 123970692 + MGP_BALBcJ_P0086407 Aqp8 protein_coding protein_coding MGP_BALBcJ_T0086408.1 MGP_BALBcJ_G0032951.1 mouse_genomes_project 7 123966456 123970704 + Aqp8 protein_coding processed_transcript MGP_BALBcJ_T0086699.1 MGP_BALBcJ_G0032996.1 mouse_genomes_project 7 127418813 127436386 + MGP_BALBcJ_P0086699 Kctd13 protein_coding protein_coding MGP_BALBcJ_T0086700.1 MGP_BALBcJ_G0032996.1 mouse_genomes_project 7 127419855 127432125 + Kctd13 protein_coding retained_intron MGP_BALBcJ_T0086701.1 MGP_BALBcJ_G0032996.1 mouse_genomes_project 7 127432802 127435722 + Kctd13 protein_coding retained_intron MGP_BALBcJ_T0015898.1 MGP_BALBcJ_G0013995.1 mouse_genomes_project 7 129120617 129120917 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083552.1 MGP_BALBcJ_G0032143.1 mouse_genomes_project 7 43312971 43327429 + MGP_BALBcJ_P0083552 protein_coding protein_coding MGP_BALBcJ_T0008821.1 MGP_BALBcJ_G0007125.1 mouse_genomes_project 7 35340073 35343816 + Gm29129 lincRNA lincRNA MGP_BALBcJ_T0008863.1 MGP_BALBcJ_G0007157.1 mouse_genomes_project 7 64785116 64785672 - Gm45214 lincRNA lincRNA MGP_BALBcJ_T0008864.1 MGP_BALBcJ_G0007157.1 mouse_genomes_project 7 64785119 64785732 - Gm45214 lincRNA lincRNA MGP_BALBcJ_T0015689.1 MGP_BALBcJ_G0013786.1 mouse_genomes_project 7 10533447 10534719 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018355.1 MGP_BALBcJ_G0015617.1 mouse_genomes_project 7 74974703 74984929 + 1500012K07Rik processed_transcript lincRNA MGP_BALBcJ_T0018356.1 MGP_BALBcJ_G0015617.1 mouse_genomes_project 7 74974709 74998747 + 1500012K07Rik processed_transcript antisense MGP_BALBcJ_T0018357.1 MGP_BALBcJ_G0015617.1 mouse_genomes_project 7 74974709 74997169 + 1500012K07Rik processed_transcript lincRNA MGP_BALBcJ_T0008793.1 MGP_BALBcJ_G0007100.1 mouse_genomes_project 7 22679983 22681799 + Gm4598 lincRNA lincRNA MGP_BALBcJ_T0084939.1 MGP_BALBcJ_G0032477.1 mouse_genomes_project 7 88163407 88199955 + MGP_BALBcJ_P0084939 Ctsc protein_coding protein_coding MGP_BALBcJ_T0084940.1 MGP_BALBcJ_G0032477.1 mouse_genomes_project 7 88163456 88197088 + MGP_BALBcJ_P0084940 Ctsc protein_coding protein_coding MGP_BALBcJ_T0084941.1 MGP_BALBcJ_G0032477.1 mouse_genomes_project 7 88163460 88167071 + Ctsc protein_coding retained_intron MGP_BALBcJ_T0084942.1 MGP_BALBcJ_G0032477.1 mouse_genomes_project 7 88163460 88176672 + Ctsc protein_coding retained_intron MGP_BALBcJ_T0084943.1 MGP_BALBcJ_G0032477.1 mouse_genomes_project 7 88182142 88191373 + Ctsc protein_coding retained_intron MGP_BALBcJ_T0081444.1 MGP_BALBcJ_G0031542.1 mouse_genomes_project 7 1752661 1758390 - MGP_BALBcJ_P0081444 Il11 protein_coding protein_coding MGP_BALBcJ_T0081445.1 MGP_BALBcJ_G0031542.1 mouse_genomes_project 7 1753483 1763459 - MGP_BALBcJ_P0081445 Il11 protein_coding protein_coding MGP_BALBcJ_T0087558.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141960109 141998326 + MGP_BALBcJ_P0087558 Phrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087559.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141960114 141998210 + MGP_BALBcJ_P0087559 Phrf1 protein_coding protein_coding MGP_BALBcJ_T0087560.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141965492 141982559 + MGP_BALBcJ_P0087560 Phrf1 protein_coding protein_coding MGP_BALBcJ_T0087561.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141978740 141998179 + MGP_BALBcJ_P0087561 Phrf1 protein_coding protein_coding MGP_BALBcJ_T0087562.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141990485 141993653 + Phrf1 protein_coding processed_transcript MGP_BALBcJ_T0087563.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141991586 141993413 + Phrf1 protein_coding retained_intron MGP_BALBcJ_T0087564.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141991587 141992470 + Phrf1 protein_coding retained_intron MGP_BALBcJ_T0087565.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141994773 141998334 + MGP_BALBcJ_P0087565 Phrf1 protein_coding protein_coding MGP_BALBcJ_T0087566.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141995241 141996171 + Phrf1 protein_coding processed_transcript MGP_BALBcJ_T0087567.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141995980 141998331 + MGP_BALBcJ_P0087567 Phrf1 protein_coding protein_coding MGP_BALBcJ_T0087568.1 MGP_BALBcJ_G0033201.1 mouse_genomes_project 7 141997262 141998284 + Phrf1 protein_coding processed_transcript MGP_BALBcJ_T0011678.1 MGP_BALBcJ_G0009803.1 mouse_genomes_project 7 131048178 131048254 - Gm27884 misc_RNA misc_RNA MGP_BALBcJ_T0087735.1 MGP_BALBcJ_G0033232.1 mouse_genomes_project 7 142965100 142966280 - MGP_BALBcJ_P0087735 protein_coding protein_coding MGP_BALBcJ_T0102701.1 MGP_BALBcJ_G0040516.1 mouse_genomes_project 7 11964977 11965677 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085510.1 MGP_BALBcJ_G0032630.1 mouse_genomes_project 7 103191330 103192290 + MGP_BALBcJ_P0085510 Olfr585 protein_coding protein_coding MGP_BALBcJ_T0083045.1 MGP_BALBcJ_G0032021.1 mouse_genomes_project 7 29049868 29061036 - MGP_BALBcJ_P0083045 Haus5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083046.1 MGP_BALBcJ_G0032021.1 mouse_genomes_project 7 29049873 29061097 - MGP_BALBcJ_P0083046 Haus5 protein_coding protein_coding MGP_BALBcJ_T0083047.1 MGP_BALBcJ_G0032021.1 mouse_genomes_project 7 29050095 29053170 - Haus5 protein_coding retained_intron MGP_BALBcJ_T0083048.1 MGP_BALBcJ_G0032021.1 mouse_genomes_project 7 29053726 29055128 - Haus5 protein_coding retained_intron MGP_BALBcJ_T0083049.1 MGP_BALBcJ_G0032021.1 mouse_genomes_project 7 29054254 29061063 - Haus5 protein_coding retained_intron MGP_BALBcJ_T0083050.1 MGP_BALBcJ_G0032021.1 mouse_genomes_project 7 29055012 29057029 - Haus5 protein_coding retained_intron MGP_BALBcJ_T0085513.1 MGP_BALBcJ_G0032633.1 mouse_genomes_project 7 103280250 103281195 - MGP_BALBcJ_P0085513 Olfr591 protein_coding protein_coding MGP_BALBcJ_T0102698.1 MGP_BALBcJ_G0040513.1 mouse_genomes_project 7 11613951 11626726 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085941.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111388278 111415680 + MGP_BALBcJ_P0085941 Ctr9 protein_coding protein_coding MGP_BALBcJ_T0085942.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111388322 111406959 + Ctr9 protein_coding retained_intron MGP_BALBcJ_T0085943.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111388340 111390137 + Ctr9 protein_coding retained_intron MGP_BALBcJ_T0085944.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111389542 111393384 + Ctr9 protein_coding processed_transcript MGP_BALBcJ_T0085945.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111393363 111394716 + Ctr9 protein_coding retained_intron MGP_BALBcJ_T0085946.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111405617 111406130 + Ctr9 protein_coding retained_intron MGP_BALBcJ_T0085947.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111405617 111407287 + Ctr9 protein_coding retained_intron MGP_BALBcJ_T0085948.1 MGP_BALBcJ_G0032851.1 mouse_genomes_project 7 111410300 111411673 + Ctr9 protein_coding processed_transcript MGP_BALBcJ_T0084248.1 MGP_BALBcJ_G0032321.1 mouse_genomes_project 7 62652653 62767186 - MGP_BALBcJ_P0084248 Chrna7 protein_coding protein_coding MGP_BALBcJ_T0018400.1 MGP_BALBcJ_G0015641.1 mouse_genomes_project 7 143309314 143323295 - Nctc1 processed_transcript antisense MGP_BALBcJ_T0018401.1 MGP_BALBcJ_G0015641.1 mouse_genomes_project 7 143318372 143323295 - Nctc1 processed_transcript retained_intron MGP_BALBcJ_T0101315.1 MGP_BALBcJ_G0039351.1 mouse_genomes_project 7 43598841 43598934 + Gm23991 snoRNA snoRNA MGP_BALBcJ_T0085572.1 MGP_BALBcJ_G0032688.1 mouse_genomes_project 7 104281995 104284652 - MGP_BALBcJ_P0085572 Ubqln3 protein_coding protein_coding MGP_BALBcJ_T0015693.1 MGP_BALBcJ_G0013790.1 mouse_genomes_project 7 11099428 11099642 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086756.1 MGP_BALBcJ_G0033009.1 mouse_genomes_project 7 127599479 127614435 - MGP_BALBcJ_P0086756 Qprt protein_coding protein_coding MGP_BALBcJ_T0086757.1 MGP_BALBcJ_G0033009.1 mouse_genomes_project 7 127601356 127614250 - Qprt protein_coding processed_transcript MGP_BALBcJ_T0086758.1 MGP_BALBcJ_G0033009.1 mouse_genomes_project 7 127607998 127614227 - Qprt protein_coding processed_transcript MGP_BALBcJ_T0086602.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127252597 127262908 + MGP_BALBcJ_P0086602 Gdpd3 protein_coding protein_coding MGP_BALBcJ_T0086603.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127253108 127254476 + Gdpd3 protein_coding retained_intron MGP_BALBcJ_T0086604.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127253110 127254925 + Gdpd3 protein_coding retained_intron MGP_BALBcJ_T0086605.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127253438 127254299 + Gdpd3 protein_coding retained_intron MGP_BALBcJ_T0086606.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127253442 127262913 + MGP_BALBcJ_P0086606 Gdpd3 protein_coding unknown_likely_coding MGP_BALBcJ_T0086607.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127254413 127257428 + Gdpd3 protein_coding retained_intron MGP_BALBcJ_T0086608.1 MGP_BALBcJ_G0032984.1 mouse_genomes_project 7 127254783 127262912 + Gdpd3 protein_coding retained_intron MGP_BALBcJ_T0084782.1 MGP_BALBcJ_G0032416.1 mouse_genomes_project 7 80849828 80903878 + MGP_BALBcJ_P0084782 Slc28a1 protein_coding protein_coding MGP_BALBcJ_T0084783.1 MGP_BALBcJ_G0032416.1 mouse_genomes_project 7 80849883 80903878 + MGP_BALBcJ_P0084783 Slc28a1 protein_coding protein_coding MGP_BALBcJ_T0083194.1 MGP_BALBcJ_G0032046.1 mouse_genomes_project 7 29541281 29552059 - MGP_BALBcJ_P0083194 Scn1b protein_coding protein_coding MGP_BALBcJ_T0085037.1 MGP_BALBcJ_G0032503.1 mouse_genomes_project 7 96860215 96975374 + MGP_BALBcJ_P0085037 Nars2 protein_coding protein_coding MGP_BALBcJ_T0085038.1 MGP_BALBcJ_G0032503.1 mouse_genomes_project 7 96860231 96911686 + Nars2 protein_coding processed_transcript MGP_BALBcJ_T0085039.1 MGP_BALBcJ_G0032503.1 mouse_genomes_project 7 96860272 96950076 + MGP_BALBcJ_P0085039 Nars2 protein_coding protein_coding MGP_BALBcJ_T0085040.1 MGP_BALBcJ_G0032503.1 mouse_genomes_project 7 96933737 96973558 + MGP_BALBcJ_P0085040 Nars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085041.1 MGP_BALBcJ_G0032503.1 mouse_genomes_project 7 96949438 96973588 + MGP_BALBcJ_P0085041 Nars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015814.1 MGP_BALBcJ_G0013911.1 mouse_genomes_project 7 74545901 74546700 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084831.1 MGP_BALBcJ_G0032430.1 mouse_genomes_project 7 81642879 81695552 - MGP_BALBcJ_P0084831 Hdgfrp3 protein_coding protein_coding MGP_BALBcJ_T0084832.1 MGP_BALBcJ_G0032430.1 mouse_genomes_project 7 81653612 81695538 - MGP_BALBcJ_P0084832 Hdgfrp3 protein_coding protein_coding MGP_BALBcJ_T0084833.1 MGP_BALBcJ_G0032430.1 mouse_genomes_project 7 81658950 81695103 - Hdgfrp3 protein_coding retained_intron MGP_BALBcJ_T0087686.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142235249 142281123 - MGP_BALBcJ_P0087686 Chid1 protein_coding protein_coding MGP_BALBcJ_T0087687.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142237509 142281085 - Chid1 protein_coding retained_intron MGP_BALBcJ_T0087688.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142238160 142274201 - MGP_BALBcJ_P0087688 Chid1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087689.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142238160 142281135 - MGP_BALBcJ_P0087689 Chid1 protein_coding protein_coding MGP_BALBcJ_T0087690.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142253074 142267815 - Chid1 protein_coding processed_transcript MGP_BALBcJ_T0087691.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142256598 142280796 - MGP_BALBcJ_P0087691 Chid1 protein_coding protein_coding MGP_BALBcJ_T0087692.1 MGP_BALBcJ_G0033219.1 mouse_genomes_project 7 142273173 142281098 - Chid1 protein_coding retained_intron MGP_BALBcJ_T0018389.1 MGP_BALBcJ_G0015635.1 mouse_genomes_project 7 131412839 131417871 - Gm5602 processed_transcript processed_transcript MGP_BALBcJ_T0086288.1 MGP_BALBcJ_G0032927.1 mouse_genomes_project 7 121507526 121550227 + MGP_BALBcJ_P0086288 Mettl9 protein_coding protein_coding MGP_BALBcJ_T0082596.1 MGP_BALBcJ_G0031913.1 mouse_genomes_project 7 26303486 26311846 - MGP_BALBcJ_P0082596 Psmc4 protein_coding protein_coding MGP_BALBcJ_T0082597.1 MGP_BALBcJ_G0031913.1 mouse_genomes_project 7 26303495 26308760 - Psmc4 protein_coding retained_intron MGP_BALBcJ_T0082598.1 MGP_BALBcJ_G0031913.1 mouse_genomes_project 7 26303496 26311801 - Psmc4 protein_coding retained_intron MGP_BALBcJ_T0082599.1 MGP_BALBcJ_G0031913.1 mouse_genomes_project 7 26304367 26309087 - Psmc4 protein_coding retained_intron MGP_BALBcJ_T0082600.1 MGP_BALBcJ_G0031913.1 mouse_genomes_project 7 26304444 26309256 - Psmc4 protein_coding processed_transcript MGP_BALBcJ_T0082601.1 MGP_BALBcJ_G0031913.1 mouse_genomes_project 7 26308994 26311801 - Psmc4 protein_coding retained_intron MGP_BALBcJ_T0085484.1 MGP_BALBcJ_G0032606.1 mouse_genomes_project 7 102698272 102699226 + MGP_BALBcJ_P0085484 Olfr554 protein_coding protein_coding MGP_BALBcJ_T0008828.1 MGP_BALBcJ_G0007132.1 mouse_genomes_project 7 36866815 36883841 + Gm44635 lincRNA lincRNA MGP_BALBcJ_T0082835.1 MGP_BALBcJ_G0031972.1 mouse_genomes_project 7 28186964 28204022 + MGP_BALBcJ_P0082835 Zfp790 protein_coding protein_coding MGP_BALBcJ_T0082836.1 MGP_BALBcJ_G0031972.1 mouse_genomes_project 7 28186964 28204022 + MGP_BALBcJ_P0082836 Zfp790 protein_coding protein_coding MGP_BALBcJ_T0081194.1 MGP_BALBcJ_G0031499.1 mouse_genomes_project 7 194531 210224 + Prkcg protein_coding processed_transcript MGP_BALBcJ_T0081199.1 MGP_BALBcJ_G0031499.1 mouse_genomes_project 7 209434 237383 + MGP_BALBcJ_P0081199 Prkcg protein_coding protein_coding MGP_BALBcJ_T0081200.1 MGP_BALBcJ_G0031499.1 mouse_genomes_project 7 209557 236657 + MGP_BALBcJ_P0081200 Prkcg protein_coding protein_coding MGP_BALBcJ_T0081201.1 MGP_BALBcJ_G0031499.1 mouse_genomes_project 7 211220 224868 + MGP_BALBcJ_P0081201 Prkcg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081202.1 MGP_BALBcJ_G0031499.1 mouse_genomes_project 7 235127 236310 + Prkcg protein_coding retained_intron MGP_BALBcJ_T0015772.1 MGP_BALBcJ_G0013869.1 mouse_genomes_project 7 42582984 42583222 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102816.1 MGP_BALBcJ_G0040631.1 mouse_genomes_project 7 104007448 104007577 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081338.1 MGP_BALBcJ_G0031525.1 mouse_genomes_project 7 1355638 1388331 - MGP_BALBcJ_P0081338 Gp6 protein_coding protein_coding MGP_BALBcJ_T0081339.1 MGP_BALBcJ_G0031525.1 mouse_genomes_project 7 1360635 1388315 - MGP_BALBcJ_P0081339 Gp6 protein_coding protein_coding MGP_BALBcJ_T0102770.1 MGP_BALBcJ_G0040585.1 mouse_genomes_project 7 47877780 47878765 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098386.1 MGP_BALBcJ_G0036440.1 mouse_genomes_project 7 15354942 15355447 + pseudogene pseudogene MGP_BALBcJ_T0102799.1 MGP_BALBcJ_G0040614.1 mouse_genomes_project 7 85997359 85998299 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081576.1 MGP_BALBcJ_G0031607.1 mouse_genomes_project 7 7760334 7761294 - MGP_BALBcJ_P0081576 Vmn1r68 protein_coding protein_coding MGP_BALBcJ_T0098641.1 MGP_BALBcJ_G0036695.1 mouse_genomes_project 7 17872337 17872456 - n-R5s152 rRNA rRNA MGP_BALBcJ_T0083997.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605055 45648953 - MGP_BALBcJ_P0083997 Ush1c protein_coding protein_coding MGP_BALBcJ_T0083998.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605062 45648964 - MGP_BALBcJ_P0083998 Ush1c protein_coding protein_coding MGP_BALBcJ_T0083999.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605062 45648951 - MGP_BALBcJ_P0083999 Ush1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084000.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605336 45648925 - MGP_BALBcJ_P0084000 Ush1c protein_coding protein_coding MGP_BALBcJ_T0084001.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605355 45648959 - MGP_BALBcJ_P0084001 Ush1c protein_coding protein_coding MGP_BALBcJ_T0084002.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605356 45640777 - MGP_BALBcJ_P0084002 Ush1c protein_coding protein_coding MGP_BALBcJ_T0084003.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45605375 45612040 - Ush1c protein_coding retained_intron MGP_BALBcJ_T0084004.1 MGP_BALBcJ_G0032252.1 mouse_genomes_project 7 45610735 45630210 - Ush1c protein_coding processed_transcript MGP_BALBcJ_T0085473.1 MGP_BALBcJ_G0032596.1 mouse_genomes_project 7 102536087 102537217 - MGP_BALBcJ_P0085473 Olfr543 protein_coding protein_coding MGP_BALBcJ_T0081967.1 MGP_BALBcJ_G0031743.1 mouse_genomes_project 7 16983690 16987510 + MGP_BALBcJ_P0081967 Snrpd2 protein_coding protein_coding MGP_BALBcJ_T0081968.1 MGP_BALBcJ_G0031743.1 mouse_genomes_project 7 16983827 16985061 + Snrpd2 protein_coding retained_intron MGP_BALBcJ_T0084902.1 MGP_BALBcJ_G0032453.1 mouse_genomes_project 7 84702361 84723018 - MGP_BALBcJ_P0084902 Vmn2r65 protein_coding protein_coding MGP_BALBcJ_T0087269.1 MGP_BALBcJ_G0033107.1 mouse_genomes_project 7 134339755 134351004 + MGP_BALBcJ_P0087269 Bccip protein_coding protein_coding MGP_BALBcJ_T0087270.1 MGP_BALBcJ_G0033107.1 mouse_genomes_project 7 134339770 134345305 + Bccip protein_coding retained_intron MGP_BALBcJ_T0087271.1 MGP_BALBcJ_G0033107.1 mouse_genomes_project 7 134339824 134344172 + Bccip protein_coding processed_transcript MGP_BALBcJ_T0087272.1 MGP_BALBcJ_G0033107.1 mouse_genomes_project 7 134344600 134350800 + Bccip protein_coding processed_transcript MGP_BALBcJ_T0087273.1 MGP_BALBcJ_G0033107.1 mouse_genomes_project 7 134347237 134349074 + Bccip protein_coding retained_intron MGP_BALBcJ_T0083275.1 MGP_BALBcJ_G0032066.1 mouse_genomes_project 7 33413286 33554850 - MGP_BALBcJ_P0083275 Chst8 protein_coding protein_coding MGP_BALBcJ_T0083276.1 MGP_BALBcJ_G0032066.1 mouse_genomes_project 7 33413286 33554850 - MGP_BALBcJ_P0083276 Chst8 protein_coding protein_coding MGP_BALBcJ_T0083277.1 MGP_BALBcJ_G0032066.1 mouse_genomes_project 7 33413575 33554850 - MGP_BALBcJ_P0083277 Chst8 protein_coding protein_coding MGP_BALBcJ_T0083278.1 MGP_BALBcJ_G0032066.1 mouse_genomes_project 7 33414635 33554875 - Chst8 protein_coding processed_transcript MGP_BALBcJ_T0083279.1 MGP_BALBcJ_G0032066.1 mouse_genomes_project 7 33434157 33437289 - Chst8 protein_coding processed_transcript MGP_BALBcJ_T0083280.1 MGP_BALBcJ_G0032066.1 mouse_genomes_project 7 33434960 33554836 - Chst8 protein_coding processed_transcript MGP_BALBcJ_T0084944.1 MGP_BALBcJ_G0032478.1 mouse_genomes_project 7 88315824 88377481 + MGP_BALBcJ_P0084944 Rab38 protein_coding protein_coding MGP_BALBcJ_T0085023.1 MGP_BALBcJ_G0032500.1 mouse_genomes_project 7 92704581 92721262 - MGP_BALBcJ_P0085023 Ddias protein_coding protein_coding MGP_BALBcJ_T0005147.1 MGP_BALBcJ_G0004386.1 mouse_genomes_project 7 23438130 23502399 + antisense antisense MGP_BALBcJ_T0005148.1 MGP_BALBcJ_G0004386.1 mouse_genomes_project 7 23438134 23447437 + antisense antisense MGP_BALBcJ_T0005149.1 MGP_BALBcJ_G0004386.1 mouse_genomes_project 7 23446505 23447274 + antisense antisense MGP_BALBcJ_T0082872.1 MGP_BALBcJ_G0031983.1 mouse_genomes_project 7 28457246 28470594 - MGP_BALBcJ_P0082872 Zfp566 protein_coding protein_coding MGP_BALBcJ_T0082873.1 MGP_BALBcJ_G0031983.1 mouse_genomes_project 7 28460615 28470530 - Zfp566 protein_coding retained_intron MGP_BALBcJ_T0087527.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141853012 141885750 + MGP_BALBcJ_P0087527 Ptdss2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087528.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141860766 141884285 + MGP_BALBcJ_P0087528 Ptdss2 protein_coding protein_coding MGP_BALBcJ_T0087529.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141860788 141884117 + MGP_BALBcJ_P0087529 Ptdss2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087530.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141861796 141888315 + MGP_BALBcJ_P0087530 Ptdss2 protein_coding protein_coding MGP_BALBcJ_T0087531.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141861811 141885617 + Ptdss2 protein_coding retained_intron MGP_BALBcJ_T0087532.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141861854 141874468 + Ptdss2 protein_coding processed_transcript MGP_BALBcJ_T0087533.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141861866 141873968 + MGP_BALBcJ_P0087533 Ptdss2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087534.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141862948 141877930 + MGP_BALBcJ_P0087534 Ptdss2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087535.1 MGP_BALBcJ_G0033195.1 mouse_genomes_project 7 141863063 141874497 + Ptdss2 protein_coding processed_transcript MGP_BALBcJ_T0082422.1 MGP_BALBcJ_G0031865.1 mouse_genomes_project 7 24013449 24043863 + MGP_BALBcJ_P0082422 Cyp2b10 protein_coding protein_coding MGP_BALBcJ_T0082423.1 MGP_BALBcJ_G0031865.1 mouse_genomes_project 7 24013505 24043798 + MGP_BALBcJ_P0082423 Cyp2b10 protein_coding protein_coding MGP_BALBcJ_T0082424.1 MGP_BALBcJ_G0031865.1 mouse_genomes_project 7 24034451 24035116 + Cyp2b10 protein_coding retained_intron MGP_BALBcJ_T0005249.1 MGP_BALBcJ_G0004458.1 mouse_genomes_project 7 113925539 113951885 - Far1os antisense antisense MGP_BALBcJ_T0005250.1 MGP_BALBcJ_G0004458.1 mouse_genomes_project 7 113933514 113960521 - Far1os antisense antisense MGP_BALBcJ_T0005271.1 MGP_BALBcJ_G0004473.1 mouse_genomes_project 7 128057470 128071658 - Gm28198 antisense antisense MGP_BALBcJ_T0081384.1 MGP_BALBcJ_G0031530.1 mouse_genomes_project 7 1504166 1518365 - MGP_BALBcJ_P0081384 Dnaaf3 protein_coding unknown_likely_coding MGP_BALBcJ_T0081391.1 MGP_BALBcJ_G0031530.1 mouse_genomes_project 7 1508798 1518225 - MGP_BALBcJ_P0081391 Dnaaf3 protein_coding protein_coding MGP_BALBcJ_T0011658.1 MGP_BALBcJ_G0009783.1 mouse_genomes_project 7 10684558 10684838 + Gm24909 misc_RNA misc_RNA MGP_BALBcJ_T0087957.1 MGP_BALBcJ_G0033277.1 mouse_genomes_project 7 145704823 145720969 + MGP_BALBcJ_P0087957 Oraov1 protein_coding protein_coding MGP_BALBcJ_T0087958.1 MGP_BALBcJ_G0033277.1 mouse_genomes_project 7 145704859 145710843 + MGP_BALBcJ_P0087958 Oraov1 protein_coding protein_coding MGP_BALBcJ_T0087959.1 MGP_BALBcJ_G0033277.1 mouse_genomes_project 7 145704895 145707425 + Oraov1 protein_coding retained_intron MGP_BALBcJ_T0087960.1 MGP_BALBcJ_G0033277.1 mouse_genomes_project 7 145704897 145706182 + Oraov1 protein_coding processed_transcript MGP_BALBcJ_T0087961.1 MGP_BALBcJ_G0033277.1 mouse_genomes_project 7 145704904 145719717 + MGP_BALBcJ_P0087961 Oraov1 protein_coding protein_coding MGP_BALBcJ_T0087962.1 MGP_BALBcJ_G0033277.1 mouse_genomes_project 7 145705860 145709538 + Oraov1 protein_coding retained_intron MGP_BALBcJ_T0087399.1 MGP_BALBcJ_G0033142.1 mouse_genomes_project 7 140717682 140721146 + MGP_BALBcJ_P0087399 Zfp511 protein_coding unknown_likely_coding MGP_BALBcJ_T0084893.1 MGP_BALBcJ_G0032448.1 mouse_genomes_project 7 84009735 84171192 - MGP_BALBcJ_P0084893 Arnt2 protein_coding protein_coding MGP_BALBcJ_T0082066.1 MGP_BALBcJ_G0031771.1 mouse_genomes_project 7 17533118 17536439 - MGP_BALBcJ_P0082066 Apoc4 protein_coding protein_coding MGP_BALBcJ_T0102702.1 MGP_BALBcJ_G0040517.1 mouse_genomes_project 7 11977268 11977710 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015882.1 MGP_BALBcJ_G0013979.1 mouse_genomes_project 7 125544236 125546361 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085570.1 MGP_BALBcJ_G0032686.1 mouse_genomes_project 7 104254486 104255425 + MGP_BALBcJ_P0085570 Olfr646 protein_coding protein_coding MGP_BALBcJ_T0005277.1 MGP_BALBcJ_G0004478.1 mouse_genomes_project 7 128724494 128729668 - Gm44850 antisense antisense MGP_BALBcJ_T0002283.1 MGP_BALBcJ_G0002194.1 mouse_genomes_project 7 100415120 100416076 + TEC TEC MGP_BALBcJ_T0081846.1 MGP_BALBcJ_G0031700.1 mouse_genomes_project 7 14480645 14484538 + MGP_BALBcJ_P0081846 Gng8 protein_coding protein_coding MGP_BALBcJ_T0081847.1 MGP_BALBcJ_G0031700.1 mouse_genomes_project 7 14481071 14484548 + MGP_BALBcJ_P0081847 Gng8 protein_coding protein_coding MGP_BALBcJ_T0081848.1 MGP_BALBcJ_G0031700.1 mouse_genomes_project 7 14481130 14484536 + MGP_BALBcJ_P0081848 Gng8 protein_coding protein_coding MGP_BALBcJ_T0081849.1 MGP_BALBcJ_G0031700.1 mouse_genomes_project 7 14481180 14484539 + Gng8 protein_coding processed_transcript MGP_BALBcJ_T0081850.1 MGP_BALBcJ_G0031700.1 mouse_genomes_project 7 14483759 14484549 + Gng8 protein_coding retained_intron MGP_BALBcJ_T0081851.1 MGP_BALBcJ_G0031700.1 mouse_genomes_project 7 14484057 14484476 + Gng8 protein_coding retained_intron MGP_BALBcJ_T0101353.1 MGP_BALBcJ_G0039389.1 mouse_genomes_project 7 111434799 111434967 - Gm23262 snoRNA snoRNA MGP_BALBcJ_T0011666.1 MGP_BALBcJ_G0009791.1 mouse_genomes_project 7 73291589 73291842 + Gm23020 misc_RNA misc_RNA MGP_BALBcJ_T0102772.1 MGP_BALBcJ_G0040587.1 mouse_genomes_project 7 48153210 48154102 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085821.1 MGP_BALBcJ_G0032811.1 mouse_genomes_project 7 108832300 108833359 - MGP_BALBcJ_P0085821 Olfr502 protein_coding protein_coding MGP_BALBcJ_T0015880.1 MGP_BALBcJ_G0013977.1 mouse_genomes_project 7 123342843 123343170 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086520.1 MGP_BALBcJ_G0032972.1 mouse_genomes_project 7 126969562 126981292 - MGP_BALBcJ_P0086520 Atxn2l protein_coding protein_coding MGP_BALBcJ_T0086521.1 MGP_BALBcJ_G0032972.1 mouse_genomes_project 7 126969569 126980269 - MGP_BALBcJ_P0086521 Atxn2l protein_coding protein_coding MGP_BALBcJ_T0086522.1 MGP_BALBcJ_G0032972.1 mouse_genomes_project 7 126969640 126981210 - MGP_BALBcJ_P0086522 Atxn2l protein_coding protein_coding MGP_BALBcJ_T0086523.1 MGP_BALBcJ_G0032972.1 mouse_genomes_project 7 126970007 126971231 - MGP_BALBcJ_P0086523 Atxn2l protein_coding protein_coding MGP_BALBcJ_T0086524.1 MGP_BALBcJ_G0032972.1 mouse_genomes_project 7 126970817 126980173 - MGP_BALBcJ_P0086524 Atxn2l protein_coding protein_coding MGP_BALBcJ_T0086525.1 MGP_BALBcJ_G0032972.1 mouse_genomes_project 7 126977004 126979955 - MGP_BALBcJ_P0086525 Atxn2l protein_coding protein_coding MGP_BALBcJ_T0102806.1 MGP_BALBcJ_G0040621.1 mouse_genomes_project 7 103014648 103015533 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084425.1 MGP_BALBcJ_G0032352.1 mouse_genomes_project 7 67311130 67340592 - MGP_BALBcJ_P0084425 Synm protein_coding protein_coding MGP_BALBcJ_T0084426.1 MGP_BALBcJ_G0032352.1 mouse_genomes_project 7 67311130 67340592 - MGP_BALBcJ_P0084426 Synm protein_coding protein_coding MGP_BALBcJ_T0010881.1 MGP_BALBcJ_G0009006.1 mouse_genomes_project 7 77708011 77708105 - Gm44358 miRNA miRNA MGP_BALBcJ_T0010829.1 MGP_BALBcJ_G0008954.1 mouse_genomes_project 7 23271716 23271774 - Mir7048 miRNA miRNA MGP_BALBcJ_T0082112.1 MGP_BALBcJ_G0031783.1 mouse_genomes_project 7 17800312 17813458 - MGP_BALBcJ_P0082112 Igsf23 protein_coding protein_coding MGP_BALBcJ_T0083041.1 MGP_BALBcJ_G0032019.1 mouse_genomes_project 7 29029086 29031340 - MGP_BALBcJ_P0083041 Etv2 protein_coding protein_coding MGP_BALBcJ_T0083575.1 MGP_BALBcJ_G0032148.1 mouse_genomes_project 7 43653111 43657327 - MGP_BALBcJ_P0083575 Clec11a protein_coding protein_coding MGP_BALBcJ_T0083761.1 MGP_BALBcJ_G0032191.1 mouse_genomes_project 7 44493581 44495583 - MGP_BALBcJ_P0083761 Rps11 protein_coding protein_coding MGP_BALBcJ_T0101325.1 MGP_BALBcJ_G0039361.1 mouse_genomes_project 7 58879893 58879972 - Gm24966 snoRNA snoRNA MGP_BALBcJ_T0085919.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111125442 111169195 + MGP_BALBcJ_P0085919 Ampd3 protein_coding protein_coding MGP_BALBcJ_T0085920.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111125575 111148517 + Ampd3 protein_coding processed_transcript MGP_BALBcJ_T0085921.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111129839 111169681 + MGP_BALBcJ_P0085921 Ampd3 protein_coding protein_coding MGP_BALBcJ_T0085922.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111130023 111151956 + Ampd3 protein_coding retained_intron MGP_BALBcJ_T0085923.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111130907 111146047 + MGP_BALBcJ_P0085923 Ampd3 protein_coding protein_coding MGP_BALBcJ_T0085924.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111131479 111145969 + MGP_BALBcJ_P0085924 Ampd3 protein_coding protein_coding MGP_BALBcJ_T0085925.1 MGP_BALBcJ_G0032847.1 mouse_genomes_project 7 111134921 111148562 + MGP_BALBcJ_P0085925 Ampd3 protein_coding protein_coding MGP_BALBcJ_T0002260.1 MGP_BALBcJ_G0002171.1 mouse_genomes_project 7 75741922 75744572 + TEC TEC MGP_BALBcJ_T0081464.1 MGP_BALBcJ_G0031548.1 mouse_genomes_project 7 1830519 1852775 - MGP_BALBcJ_P0081464 Isoc2b protein_coding protein_coding MGP_BALBcJ_T0086885.1 MGP_BALBcJ_G0033032.1 mouse_genomes_project 7 128157413 128204601 - MGP_BALBcJ_P0086885 Bcl7c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086886.1 MGP_BALBcJ_G0033032.1 mouse_genomes_project 7 128162745 128204455 - MGP_BALBcJ_P0086886 Bcl7c protein_coding protein_coding MGP_BALBcJ_T0086887.1 MGP_BALBcJ_G0033032.1 mouse_genomes_project 7 128162901 128204278 - MGP_BALBcJ_P0086887 Bcl7c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086888.1 MGP_BALBcJ_G0033032.1 mouse_genomes_project 7 128200788 128204601 - MGP_BALBcJ_P0086888 Bcl7c protein_coding protein_coding MGP_BALBcJ_T0086889.1 MGP_BALBcJ_G0033032.1 mouse_genomes_project 7 128200807 128203124 - MGP_BALBcJ_P0086889 Bcl7c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086890.1 MGP_BALBcJ_G0033032.1 mouse_genomes_project 7 128201613 128203891 - Bcl7c protein_coding processed_transcript MGP_BALBcJ_T0083067.1 MGP_BALBcJ_G0032028.1 mouse_genomes_project 7 29157367 29175360 + MGP_BALBcJ_P0083067 Dmkn protein_coding protein_coding MGP_BALBcJ_T0083068.1 MGP_BALBcJ_G0032028.1 mouse_genomes_project 7 29157374 29175359 + MGP_BALBcJ_P0083068 Dmkn protein_coding protein_coding MGP_BALBcJ_T0083069.1 MGP_BALBcJ_G0032028.1 mouse_genomes_project 7 29157374 29175359 + MGP_BALBcJ_P0083069 Dmkn protein_coding protein_coding MGP_BALBcJ_T0083070.1 MGP_BALBcJ_G0032028.1 mouse_genomes_project 7 29157410 29175359 + MGP_BALBcJ_P0083070 Dmkn protein_coding protein_coding MGP_BALBcJ_T0083071.1 MGP_BALBcJ_G0032028.1 mouse_genomes_project 7 29158668 29175105 + MGP_BALBcJ_P0083071 Dmkn protein_coding protein_coding MGP_BALBcJ_T0083072.1 MGP_BALBcJ_G0032028.1 mouse_genomes_project 7 29170739 29175364 + MGP_BALBcJ_P0083072 Dmkn protein_coding protein_coding MGP_BALBcJ_T0005113.1 MGP_BALBcJ_G0004365.1 mouse_genomes_project 7 545089 549985 + Gm15929 antisense antisense MGP_BALBcJ_T0085363.1 MGP_BALBcJ_G0032575.1 mouse_genomes_project 7 101865500 101880733 - MGP_BALBcJ_P0085363 Inppl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0085364.1 MGP_BALBcJ_G0032575.1 mouse_genomes_project 7 101865528 101872139 - Inppl1 protein_coding processed_transcript MGP_BALBcJ_T0085365.1 MGP_BALBcJ_G0032575.1 mouse_genomes_project 7 101866816 101880651 - MGP_BALBcJ_P0085365 Inppl1 protein_coding protein_coding MGP_BALBcJ_T0081468.1 MGP_BALBcJ_G0031552.1 mouse_genomes_project 7 1920306 1939960 + MGP_BALBcJ_P0081468 Ssc5d protein_coding protein_coding MGP_BALBcJ_T0081871.1 MGP_BALBcJ_G0031707.1 mouse_genomes_project 7 14625616 14659257 - MGP_BALBcJ_P0081871 Hif3a protein_coding protein_coding MGP_BALBcJ_T0081872.1 MGP_BALBcJ_G0031707.1 mouse_genomes_project 7 14629836 14653473 - MGP_BALBcJ_P0081872 Hif3a protein_coding protein_coding MGP_BALBcJ_T0081873.1 MGP_BALBcJ_G0031707.1 mouse_genomes_project 7 14643410 14645350 - MGP_BALBcJ_P0081873 Hif3a protein_coding protein_coding MGP_BALBcJ_T0081874.1 MGP_BALBcJ_G0031707.1 mouse_genomes_project 7 14647122 14659214 - MGP_BALBcJ_P0081874 Hif3a protein_coding protein_coding MGP_BALBcJ_T0015833.1 MGP_BALBcJ_G0013930.1 mouse_genomes_project 7 86769192 86770140 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087138.1 MGP_BALBcJ_G0033076.1 mouse_genomes_project 7 131100994 131308712 + MGP_BALBcJ_P0087138 Tacc2 protein_coding protein_coding MGP_BALBcJ_T0087139.1 MGP_BALBcJ_G0033076.1 mouse_genomes_project 7 131100994 131308714 + MGP_BALBcJ_P0087139 Tacc2 protein_coding protein_coding MGP_BALBcJ_T0087140.1 MGP_BALBcJ_G0033076.1 mouse_genomes_project 7 131100994 131233276 + MGP_BALBcJ_P0087140 Tacc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0087141.1 MGP_BALBcJ_G0033076.1 mouse_genomes_project 7 131100994 131227796 + MGP_BALBcJ_P0087141 Tacc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0087142.1 MGP_BALBcJ_G0033076.1 mouse_genomes_project 7 131236475 131308714 + MGP_BALBcJ_P0087142 Tacc2 protein_coding protein_coding MGP_BALBcJ_T0087143.1 MGP_BALBcJ_G0033076.1 mouse_genomes_project 7 131236839 131308715 + MGP_BALBcJ_P0087143 Tacc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0085984.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113059421 113290139 + MGP_BALBcJ_P0085984 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085985.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113059458 113283316 + MGP_BALBcJ_P0085985 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085986.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113059611 113225880 + Tead1 protein_coding retained_intron MGP_BALBcJ_T0085987.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113125904 113281986 + MGP_BALBcJ_P0085987 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085988.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113140228 113281986 + MGP_BALBcJ_P0085988 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085989.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143211 113190816 + Tead1 protein_coding processed_transcript MGP_BALBcJ_T0085990.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143262 113281986 + MGP_BALBcJ_P0085990 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085991.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143307 113281986 + MGP_BALBcJ_P0085991 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085992.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143307 113281986 + MGP_BALBcJ_P0085992 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085993.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143307 113281986 + MGP_BALBcJ_P0085993 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085994.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143360 113244816 + MGP_BALBcJ_P0085994 Tead1 protein_coding protein_coding MGP_BALBcJ_T0085995.1 MGP_BALBcJ_G0032859.1 mouse_genomes_project 7 113143370 113225859 + Tead1 protein_coding retained_intron MGP_BALBcJ_T0002234.1 MGP_BALBcJ_G0002146.1 mouse_genomes_project 7 57310747 57312980 + TEC TEC MGP_BALBcJ_T0085488.1 MGP_BALBcJ_G0032610.1 mouse_genomes_project 7 102760409 102761466 + MGP_BALBcJ_P0085488 Olfr557 protein_coding protein_coding MGP_BALBcJ_T0102718.1 MGP_BALBcJ_G0040533.1 mouse_genomes_project 7 24101650 24108542 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082854.1 MGP_BALBcJ_G0031977.1 mouse_genomes_project 7 28305245 28318066 - MGP_BALBcJ_P0082854 Zfp74 protein_coding protein_coding MGP_BALBcJ_T0082855.1 MGP_BALBcJ_G0031977.1 mouse_genomes_project 7 28305940 28330344 - MGP_BALBcJ_P0082855 Zfp74 protein_coding protein_coding MGP_BALBcJ_T0082856.1 MGP_BALBcJ_G0031977.1 mouse_genomes_project 7 28307021 28330344 - MGP_BALBcJ_P0082856 Zfp74 protein_coding protein_coding MGP_BALBcJ_T0082857.1 MGP_BALBcJ_G0031977.1 mouse_genomes_project 7 28308463 28317816 - MGP_BALBcJ_P0082857 Zfp74 protein_coding protein_coding MGP_BALBcJ_T0082858.1 MGP_BALBcJ_G0031977.1 mouse_genomes_project 7 28312164 28330346 - Zfp74 protein_coding processed_transcript MGP_BALBcJ_T0102730.1 MGP_BALBcJ_G0040545.1 mouse_genomes_project 7 32461596 32463359 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015856.1 MGP_BALBcJ_G0013953.1 mouse_genomes_project 7 103247604 103247905 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098387.1 MGP_BALBcJ_G0036441.1 mouse_genomes_project 7 70948130 70948989 - pseudogene pseudogene MGP_BALBcJ_T0085636.1 MGP_BALBcJ_G0032722.1 mouse_genomes_project 7 105141874 105142828 + MGP_BALBcJ_P0085636 Olfr676 protein_coding protein_coding MGP_BALBcJ_T0084787.1 MGP_BALBcJ_G0032418.1 mouse_genomes_project 7 81090648 81092448 - Rps17 protein_coding processed_transcript MGP_BALBcJ_T0084788.1 MGP_BALBcJ_G0032418.1 mouse_genomes_project 7 81090649 81093171 - MGP_BALBcJ_P0084788 Rps17 protein_coding protein_coding MGP_BALBcJ_T0084789.1 MGP_BALBcJ_G0032418.1 mouse_genomes_project 7 81090656 81093151 - Rps17 protein_coding retained_intron MGP_BALBcJ_T0084790.1 MGP_BALBcJ_G0032418.1 mouse_genomes_project 7 81091333 81093149 - Rps17 protein_coding retained_intron MGP_BALBcJ_T0084791.1 MGP_BALBcJ_G0032418.1 mouse_genomes_project 7 81092620 81093141 - Rps17 protein_coding processed_transcript MGP_BALBcJ_T0087016.1 MGP_BALBcJ_G0033059.1 mouse_genomes_project 7 128743339 128746915 - MGP_BALBcJ_P0087016 9130023H24Rik protein_coding protein_coding MGP_BALBcJ_T0102822.1 MGP_BALBcJ_G0040637.1 mouse_genomes_project 7 104678163 104679117 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015666.1 MGP_BALBcJ_G0013763.1 mouse_genomes_project 7 936479 937311 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102831.1 MGP_BALBcJ_G0040646.1 mouse_genomes_project 7 106419948 106423541 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101317.1 MGP_BALBcJ_G0039353.1 mouse_genomes_project 7 44497539 44497629 - Snord35a snoRNA snoRNA MGP_BALBcJ_T0085512.1 MGP_BALBcJ_G0032632.1 mouse_genomes_project 7 103268295 103269249 - MGP_BALBcJ_P0085512 Olfr589 protein_coding protein_coding MGP_BALBcJ_T0002301.1 MGP_BALBcJ_G0002212.1 mouse_genomes_project 7 126871794 126873682 + TEC TEC MGP_BALBcJ_T0018354.1 MGP_BALBcJ_G0015616.1 mouse_genomes_project 7 73579661 73589185 + Gm38143 processed_transcript processed_transcript MGP_BALBcJ_T0082593.1 MGP_BALBcJ_G0031911.1 mouse_genomes_project 7 26226578 26247625 - MGP_BALBcJ_P0082593 Zfp780b protein_coding protein_coding MGP_BALBcJ_T0082159.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22297341 22305932 - MGP_BALBcJ_P0082159 Zfp61 protein_coding protein_coding MGP_BALBcJ_T0082160.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22297359 22302284 - MGP_BALBcJ_P0082160 Zfp61 protein_coding protein_coding MGP_BALBcJ_T0082161.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22298321 22302014 - Zfp61 protein_coding processed_transcript MGP_BALBcJ_T0082162.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22298464 22305567 - MGP_BALBcJ_P0082162 Zfp61 protein_coding protein_coding MGP_BALBcJ_T0082163.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22299663 22301851 - Zfp61 protein_coding retained_intron MGP_BALBcJ_T0082164.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22301373 22305555 - Zfp61 protein_coding processed_transcript MGP_BALBcJ_T0082165.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22301616 22305658 - Zfp61 protein_coding retained_intron MGP_BALBcJ_T0082166.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22303889 22307495 - Zfp61 protein_coding processed_transcript MGP_BALBcJ_T0082167.1 MGP_BALBcJ_G0031807.1 mouse_genomes_project 7 22304356 22305894 - Zfp61 protein_coding retained_intron MGP_BALBcJ_T0002196.1 MGP_BALBcJ_G0002108.1 mouse_genomes_project 7 22685384 22685622 + TEC TEC MGP_BALBcJ_T0081989.1 MGP_BALBcJ_G0031749.1 mouse_genomes_project 7 17121970 17125818 - MGP_BALBcJ_P0081989 Ppm1n protein_coding protein_coding MGP_BALBcJ_T0081990.1 MGP_BALBcJ_G0031749.1 mouse_genomes_project 7 17122007 17124155 - Ppm1n protein_coding retained_intron MGP_BALBcJ_T0081991.1 MGP_BALBcJ_G0031749.1 mouse_genomes_project 7 17123574 17123909 - Ppm1n protein_coding retained_intron MGP_BALBcJ_T0081992.1 MGP_BALBcJ_G0031749.1 mouse_genomes_project 7 17124570 17125355 - Ppm1n protein_coding retained_intron MGP_BALBcJ_T0085542.1 MGP_BALBcJ_G0032660.1 mouse_genomes_project 7 103854627 103855578 + MGP_BALBcJ_P0085542 Olfr628 protein_coding protein_coding MGP_BALBcJ_T0085596.1 MGP_BALBcJ_G0032698.1 mouse_genomes_project 7 104405925 104415487 - MGP_BALBcJ_P0085596 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085597.1 MGP_BALBcJ_G0032698.1 mouse_genomes_project 7 104405925 104422301 - MGP_BALBcJ_P0085597 protein_coding protein_coding MGP_BALBcJ_T0100078.1 MGP_BALBcJ_G0038114.1 mouse_genomes_project 7 91075695 91075798 + Gm24552 snRNA snRNA MGP_BALBcJ_T0083810.1 MGP_BALBcJ_G0032205.1 mouse_genomes_project 7 44709070 44713470 + MGP_BALBcJ_P0083810 Hrc protein_coding protein_coding MGP_BALBcJ_T0085475.1 MGP_BALBcJ_G0032598.1 mouse_genomes_project 7 102553187 102556854 - MGP_BALBcJ_P0085475 Olfr545 protein_coding protein_coding MGP_BALBcJ_T0102737.1 MGP_BALBcJ_G0040552.1 mouse_genomes_project 7 39934945 39939565 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010828.1 MGP_BALBcJ_G0008953.1 mouse_genomes_project 7 23142405 23142515 - Mir6537 miRNA miRNA MGP_BALBcJ_T0083419.1 MGP_BALBcJ_G0032093.1 mouse_genomes_project 7 39952784 39960677 + MGP_BALBcJ_P0083419 protein_coding protein_coding MGP_BALBcJ_T0082709.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27115539 27129339 + MGP_BALBcJ_P0082709 Hnrnpl protein_coding protein_coding MGP_BALBcJ_T0082710.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27115804 27123944 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0082711.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27115806 27129322 + MGP_BALBcJ_P0082711 Hnrnpl protein_coding protein_coding MGP_BALBcJ_T0082712.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27116516 27122110 + MGP_BALBcJ_P0082712 Hnrnpl protein_coding protein_coding MGP_BALBcJ_T0082713.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27117886 27129339 + MGP_BALBcJ_P0082713 Hnrnpl protein_coding protein_coding MGP_BALBcJ_T0082714.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27117933 27129313 + MGP_BALBcJ_P0082714 Hnrnpl protein_coding protein_coding MGP_BALBcJ_T0082715.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27117936 27123920 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0082716.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27120341 27129322 + MGP_BALBcJ_P0082716 Hnrnpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082717.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27120374 27121444 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0082718.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27121820 27125684 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0082719.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27122090 27127796 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0082720.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27124817 27125696 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0082721.1 MGP_BALBcJ_G0031947.1 mouse_genomes_project 7 27128285 27129317 + Hnrnpl protein_coding retained_intron MGP_BALBcJ_T0008855.1 MGP_BALBcJ_G0007150.1 mouse_genomes_project 7 51334241 51356163 - Gm29296 lincRNA lincRNA MGP_BALBcJ_T0086362.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123463873 123476412 + MGP_BALBcJ_P0086362 protein_coding protein_coding MGP_BALBcJ_T0086363.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123471103 123484792 + MGP_BALBcJ_P0086363 protein_coding protein_coding MGP_BALBcJ_T0086364.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123476043 123479165 + protein_coding retained_intron MGP_BALBcJ_T0086365.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123476261 123483960 + protein_coding retained_intron MGP_BALBcJ_T0086366.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123482907 123501798 + MGP_BALBcJ_P0086366 protein_coding unknown_likely_coding MGP_BALBcJ_T0086367.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123482907 123567497 + MGP_BALBcJ_P0086367 protein_coding unknown_likely_coding MGP_BALBcJ_T0086368.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123482945 123486102 + protein_coding retained_intron MGP_BALBcJ_T0086369.1 MGP_BALBcJ_G0032946.1 mouse_genomes_project 7 123490529 123492912 + protein_coding retained_intron MGP_BALBcJ_T0083172.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29491839 29500370 - MGP_BALBcJ_P0083172 Fxyd3 protein_coding protein_coding MGP_BALBcJ_T0083173.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494206 29495953 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083174.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494208 29500321 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083175.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494208 29494710 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083176.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494208 29495124 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083177.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494209 29500335 - MGP_BALBcJ_P0083177 Fxyd3 protein_coding protein_coding MGP_BALBcJ_T0083178.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494210 29495715 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083179.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29494555 29498617 - MGP_BALBcJ_P0083179 Fxyd3 protein_coding protein_coding MGP_BALBcJ_T0083180.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29495203 29500320 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083181.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29495679 29500311 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0083182.1 MGP_BALBcJ_G0032044.1 mouse_genomes_project 7 29496682 29500329 - Fxyd3 protein_coding retained_intron MGP_BALBcJ_T0085264.1 MGP_BALBcJ_G0032557.1 mouse_genomes_project 7 100504781 100507868 + MGP_BALBcJ_P0085264 Coa4 protein_coding protein_coding MGP_BALBcJ_T0085265.1 MGP_BALBcJ_G0032557.1 mouse_genomes_project 7 100504913 100506952 + MGP_BALBcJ_P0085265 Coa4 protein_coding protein_coding MGP_BALBcJ_T0087928.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145224056 145259801 - MGP_BALBcJ_P0087928 Cttn protein_coding protein_coding MGP_BALBcJ_T0087929.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145224058 145260065 - MGP_BALBcJ_P0087929 Cttn protein_coding protein_coding MGP_BALBcJ_T0087930.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145225207 145226652 - Cttn protein_coding retained_intron MGP_BALBcJ_T0087931.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145227109 145238869 - Cttn protein_coding retained_intron MGP_BALBcJ_T0087932.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145228342 145235000 - Cttn protein_coding processed_transcript MGP_BALBcJ_T0087933.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145234897 145241718 - Cttn protein_coding processed_transcript MGP_BALBcJ_T0087934.1 MGP_BALBcJ_G0033270.1 mouse_genomes_project 7 145245594 145249904 - Cttn protein_coding processed_transcript MGP_BALBcJ_T0002226.1 MGP_BALBcJ_G0002138.1 mouse_genomes_project 7 54527667 54528439 - TEC TEC MGP_BALBcJ_T0008961.1 MGP_BALBcJ_G0007222.1 mouse_genomes_project 7 107543523 107591056 + Platr28 lincRNA lincRNA MGP_BALBcJ_T0102753.1 MGP_BALBcJ_G0040568.1 mouse_genomes_project 7 43393511 43396827 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100079.1 MGP_BALBcJ_G0038115.1 mouse_genomes_project 7 91222596 91222702 - Gm22080 snRNA snRNA MGP_BALBcJ_T0083135.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455841 29465338 - MGP_BALBcJ_P0083135 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083136.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455845 29465980 - MGP_BALBcJ_P0083136 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083137.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455849 29463926 - Fxyd5 protein_coding retained_intron MGP_BALBcJ_T0083138.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455849 29461494 - Fxyd5 protein_coding retained_intron MGP_BALBcJ_T0083139.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455849 29465617 - MGP_BALBcJ_P0083139 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083140.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455849 29462548 - MGP_BALBcJ_P0083140 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083141.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455852 29465577 - MGP_BALBcJ_P0083141 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083142.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455852 29465577 - MGP_BALBcJ_P0083142 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083143.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455882 29465645 - MGP_BALBcJ_P0083143 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083144.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29455926 29465639 - MGP_BALBcJ_P0083144 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083145.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29459560 29465615 - MGP_BALBcJ_P0083145 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083146.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29459589 29465612 - MGP_BALBcJ_P0083146 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083147.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29459591 29465586 - MGP_BALBcJ_P0083147 Fxyd5 protein_coding protein_coding MGP_BALBcJ_T0083148.1 MGP_BALBcJ_G0032040.1 mouse_genomes_project 7 29464669 29465639 - Fxyd5 protein_coding retained_intron MGP_BALBcJ_T0081574.1 MGP_BALBcJ_G0031605.1 mouse_genomes_project 7 7672459 7673455 + MGP_BALBcJ_P0081574 Vmn1r67 protein_coding protein_coding MGP_BALBcJ_T0085485.1 MGP_BALBcJ_G0032607.1 mouse_genomes_project 7 102721461 102722409 + MGP_BALBcJ_P0085485 Olfr555 protein_coding protein_coding MGP_BALBcJ_T0085758.1 MGP_BALBcJ_G0032756.1 mouse_genomes_project 7 106994044 106994992 - MGP_BALBcJ_P0085758 Olfr694 protein_coding protein_coding MGP_BALBcJ_T0087309.1 MGP_BALBcJ_G0033121.1 mouse_genomes_project 7 137888859 138010352 - MGP_BALBcJ_P0087309 Ebf3 protein_coding protein_coding MGP_BALBcJ_T0087310.1 MGP_BALBcJ_G0033121.1 mouse_genomes_project 7 137888859 138010352 - MGP_BALBcJ_P0087310 Ebf3 protein_coding protein_coding MGP_BALBcJ_T0087311.1 MGP_BALBcJ_G0033121.1 mouse_genomes_project 7 137888859 138010352 - MGP_BALBcJ_P0087311 Ebf3 protein_coding protein_coding MGP_BALBcJ_T0087312.1 MGP_BALBcJ_G0033121.1 mouse_genomes_project 7 137889884 138010321 - MGP_BALBcJ_P0087312 Ebf3 protein_coding protein_coding MGP_BALBcJ_T0081658.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10398040 10400540 - MGP_BALBcJ_P0081658 Ube2m protein_coding protein_coding MGP_BALBcJ_T0081659.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10398067 10400458 - Ube2m protein_coding processed_transcript MGP_BALBcJ_T0081660.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10398137 10400438 - MGP_BALBcJ_P0081660 Ube2m protein_coding protein_coding MGP_BALBcJ_T0081661.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10398398 10399459 - MGP_BALBcJ_P0081661 Ube2m protein_coding protein_coding MGP_BALBcJ_T0081662.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10398786 10400557 - Ube2m protein_coding retained_intron MGP_BALBcJ_T0081663.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10399252 10401082 - MGP_BALBcJ_P0081663 Ube2m protein_coding protein_coding MGP_BALBcJ_T0081664.1 MGP_BALBcJ_G0031642.1 mouse_genomes_project 7 10399376 10400332 - Ube2m protein_coding processed_transcript MGP_BALBcJ_T0015877.1 MGP_BALBcJ_G0013974.1 mouse_genomes_project 7 122624284 122624698 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008945.1 MGP_BALBcJ_G0007211.1 mouse_genomes_project 7 92849554 92947843 + Gm26862 lincRNA lincRNA MGP_BALBcJ_T0008829.1 MGP_BALBcJ_G0007133.1 mouse_genomes_project 7 38493531 38502664 + Gm37494 lincRNA lincRNA MGP_BALBcJ_T0008830.1 MGP_BALBcJ_G0007133.1 mouse_genomes_project 7 38501842 38503064 + Gm37494 lincRNA lincRNA MGP_BALBcJ_T0008831.1 MGP_BALBcJ_G0007133.1 mouse_genomes_project 7 38501843 38531021 + Gm37494 lincRNA lincRNA MGP_BALBcJ_T0008832.1 MGP_BALBcJ_G0007133.1 mouse_genomes_project 7 38501867 38514652 + Gm37494 lincRNA lincRNA MGP_BALBcJ_T0084656.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80013213 80039562 - Rccd1 protein_coding retained_intron MGP_BALBcJ_T0084671.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80035522 80043880 - MGP_BALBcJ_P0084671 Rccd1 protein_coding protein_coding MGP_BALBcJ_T0084672.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80036462 80043581 - Rccd1 protein_coding retained_intron MGP_BALBcJ_T0084673.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80036462 80043900 - MGP_BALBcJ_P0084673 Rccd1 protein_coding protein_coding MGP_BALBcJ_T0084674.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80036509 80043910 - Rccd1 protein_coding retained_intron MGP_BALBcJ_T0084675.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80036511 80038669 - Rccd1 protein_coding retained_intron MGP_BALBcJ_T0084676.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80040379 80043576 - MGP_BALBcJ_P0084676 Rccd1 protein_coding protein_coding MGP_BALBcJ_T0084677.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80040691 80043609 - Rccd1 protein_coding retained_intron MGP_BALBcJ_T0084678.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80042077 80043590 - Rccd1 protein_coding retained_intron MGP_BALBcJ_T0084679.1 MGP_BALBcJ_G0032400.1 mouse_genomes_project 7 80043224 80043857 - Rccd1 protein_coding processed_transcript MGP_BALBcJ_T0085576.1 MGP_BALBcJ_G0032691.1 mouse_genomes_project 7 104326476 104327427 - MGP_BALBcJ_P0085576 Olfr648 protein_coding protein_coding MGP_BALBcJ_T0101355.1 MGP_BALBcJ_G0039391.1 mouse_genomes_project 7 115246755 115246887 - Gm24982 snoRNA snoRNA MGP_BALBcJ_T0081590.1 MGP_BALBcJ_G0031617.1 mouse_genomes_project 7 9494315 9495257 + MGP_BALBcJ_P0081590 Vmn1r78 protein_coding protein_coding MGP_BALBcJ_T0087401.1 MGP_BALBcJ_G0033144.1 mouse_genomes_project 7 140750991 140763651 - MGP_BALBcJ_P0087401 Caly protein_coding unknown_likely_coding MGP_BALBcJ_T0015778.1 MGP_BALBcJ_G0013875.1 mouse_genomes_project 7 43631983 43632931 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005191.1 MGP_BALBcJ_G0004418.1 mouse_genomes_project 7 45018473 45020489 - antisense antisense MGP_BALBcJ_T0005192.1 MGP_BALBcJ_G0004418.1 mouse_genomes_project 7 45019567 45020757 - antisense antisense MGP_BALBcJ_T0084010.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 45857261 46056538 - MGP_BALBcJ_P0084010 Sergef protein_coding protein_coding MGP_BALBcJ_T0084011.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 45857314 46019954 - Sergef protein_coding processed_transcript MGP_BALBcJ_T0084012.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 45857567 46031501 - Sergef protein_coding processed_transcript MGP_BALBcJ_T0084013.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 45925048 46051740 - MGP_BALBcJ_P0084013 Sergef protein_coding unknown_likely_coding MGP_BALBcJ_T0084014.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 46048637 46051925 - Sergef protein_coding retained_intron MGP_BALBcJ_T0084015.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 46048659 46056362 - MGP_BALBcJ_P0084015 Sergef protein_coding protein_coding MGP_BALBcJ_T0084016.1 MGP_BALBcJ_G0032256.1 mouse_genomes_project 7 46048673 46056311 - Sergef protein_coding processed_transcript MGP_BALBcJ_T0085633.1 MGP_BALBcJ_G0032719.1 mouse_genomes_project 7 105008620 105009841 - MGP_BALBcJ_P0085633 protein_coding protein_coding MGP_BALBcJ_T0082837.1 MGP_BALBcJ_G0031973.1 mouse_genomes_project 7 28205575 28226566 - MGP_BALBcJ_P0082837 Zfp940 protein_coding protein_coding MGP_BALBcJ_T0082838.1 MGP_BALBcJ_G0031973.1 mouse_genomes_project 7 28216139 28226538 - Zfp940 protein_coding retained_intron MGP_BALBcJ_T0082839.1 MGP_BALBcJ_G0031973.1 mouse_genomes_project 7 28217663 28226590 - MGP_BALBcJ_P0082839 Zfp940 protein_coding unknown_likely_coding MGP_BALBcJ_T0082840.1 MGP_BALBcJ_G0031973.1 mouse_genomes_project 7 28223826 28226339 - Zfp940 protein_coding processed_transcript MGP_BALBcJ_T0081217.1 MGP_BALBcJ_G0031505.1 mouse_genomes_project 7 494089 497012 + MGP_BALBcJ_P0081217 Ndufa3 protein_coding protein_coding MGP_BALBcJ_T0081218.1 MGP_BALBcJ_G0031505.1 mouse_genomes_project 7 494096 496837 + Ndufa3 protein_coding retained_intron MGP_BALBcJ_T0081219.1 MGP_BALBcJ_G0031505.1 mouse_genomes_project 7 494101 494422 + Ndufa3 protein_coding retained_intron MGP_BALBcJ_T0081220.1 MGP_BALBcJ_G0031505.1 mouse_genomes_project 7 494102 496813 + MGP_BALBcJ_P0081220 Ndufa3 protein_coding protein_coding MGP_BALBcJ_T0081221.1 MGP_BALBcJ_G0031505.1 mouse_genomes_project 7 494107 496848 + MGP_BALBcJ_P0081221 Ndufa3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081222.1 MGP_BALBcJ_G0031505.1 mouse_genomes_project 7 494333 496770 + MGP_BALBcJ_P0081222 Ndufa3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015679.1 MGP_BALBcJ_G0013776.1 mouse_genomes_project 7 2943544 2943676 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083259.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33076653 33122113 - MGP_BALBcJ_P0083259 Lsm14a protein_coding protein_coding MGP_BALBcJ_T0083260.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33076670 33085746 - MGP_BALBcJ_P0083260 Lsm14a protein_coding protein_coding MGP_BALBcJ_T0083261.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33077722 33125741 - MGP_BALBcJ_P0083261 Lsm14a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083262.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33077945 33103390 - MGP_BALBcJ_P0083262 Lsm14a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083263.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33082803 33085807 - Lsm14a protein_coding retained_intron MGP_BALBcJ_T0083264.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33085733 33121905 - MGP_BALBcJ_P0083264 Lsm14a protein_coding protein_coding MGP_BALBcJ_T0083265.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33086064 33121506 - MGP_BALBcJ_P0083265 Lsm14a protein_coding protein_coding MGP_BALBcJ_T0083266.1 MGP_BALBcJ_G0032064.1 mouse_genomes_project 7 33119006 33121587 - Lsm14a protein_coding retained_intron MGP_BALBcJ_T0085574.1 MGP_BALBcJ_G0032690.1 mouse_genomes_project 7 104298864 104307584 - MGP_BALBcJ_P0085574 Olfm5 protein_coding protein_coding MGP_BALBcJ_T0085575.1 MGP_BALBcJ_G0032690.1 mouse_genomes_project 7 104299968 104307565 - MGP_BALBcJ_P0085575 Olfm5 protein_coding protein_coding MGP_BALBcJ_T0082860.1 MGP_BALBcJ_G0031979.1 mouse_genomes_project 7 28358555 28400543 + MGP_BALBcJ_P0082860 Zfp568 protein_coding protein_coding MGP_BALBcJ_T0082861.1 MGP_BALBcJ_G0031979.1 mouse_genomes_project 7 28359907 28403721 + MGP_BALBcJ_P0082861 Zfp568 protein_coding protein_coding MGP_BALBcJ_T0082862.1 MGP_BALBcJ_G0031979.1 mouse_genomes_project 7 28362391 28399084 + MGP_BALBcJ_P0082862 Zfp568 protein_coding protein_coding MGP_BALBcJ_T0082863.1 MGP_BALBcJ_G0031979.1 mouse_genomes_project 7 28362391 28399084 + MGP_BALBcJ_P0082863 Zfp568 protein_coding protein_coding MGP_BALBcJ_T0102819.1 MGP_BALBcJ_G0040634.1 mouse_genomes_project 7 104154060 104154522 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084243.1 MGP_BALBcJ_G0032316.1 mouse_genomes_project 7 59312420 59321650 - MGP_BALBcJ_P0084243 Gm38393 protein_coding protein_coding MGP_BALBcJ_T0081665.1 MGP_BALBcJ_G0031643.1 mouse_genomes_project 7 10405949 10417421 - MGP_BALBcJ_P0081665 Mzf1 protein_coding protein_coding MGP_BALBcJ_T0081666.1 MGP_BALBcJ_G0031643.1 mouse_genomes_project 7 10405953 10416383 - MGP_BALBcJ_P0081666 Mzf1 protein_coding protein_coding MGP_BALBcJ_T0081667.1 MGP_BALBcJ_G0031643.1 mouse_genomes_project 7 10405955 10417040 - Mzf1 protein_coding retained_intron MGP_BALBcJ_T0081668.1 MGP_BALBcJ_G0031643.1 mouse_genomes_project 7 10411329 10417411 - Mzf1 protein_coding retained_intron MGP_BALBcJ_T0015700.1 MGP_BALBcJ_G0013797.1 mouse_genomes_project 7 11407594 11407772 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082013.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17228983 17242635 + MGP_BALBcJ_P0082013 Ercc2 protein_coding protein_coding MGP_BALBcJ_T0082014.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17228991 17232662 + Ercc2 protein_coding processed_transcript MGP_BALBcJ_T0082015.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17229004 17242633 + MGP_BALBcJ_P0082015 Ercc2 protein_coding protein_coding MGP_BALBcJ_T0082016.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17229013 17242635 + MGP_BALBcJ_P0082016 Ercc2 protein_coding protein_coding MGP_BALBcJ_T0082017.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17229181 17232867 + Ercc2 protein_coding processed_transcript MGP_BALBcJ_T0082018.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17229242 17241402 + MGP_BALBcJ_P0082018 Ercc2 protein_coding protein_coding MGP_BALBcJ_T0082019.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17235143 17240621 + Ercc2 protein_coding processed_transcript MGP_BALBcJ_T0082020.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17237336 17238847 + Ercc2 protein_coding retained_intron MGP_BALBcJ_T0082021.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17240370 17241727 + Ercc2 protein_coding retained_intron MGP_BALBcJ_T0082022.1 MGP_BALBcJ_G0031755.1 mouse_genomes_project 7 17240601 17241006 + Ercc2 protein_coding retained_intron MGP_BALBcJ_T0081541.1 MGP_BALBcJ_G0031583.1 mouse_genomes_project 7 3465655 3473345 + MGP_BALBcJ_P0081541 Zfp78 protein_coding protein_coding MGP_BALBcJ_T0081542.1 MGP_BALBcJ_G0031583.1 mouse_genomes_project 7 3465655 3473345 + MGP_BALBcJ_P0081542 Zfp78 protein_coding protein_coding MGP_BALBcJ_T0081903.1 MGP_BALBcJ_G0031725.1 mouse_genomes_project 7 16602839 16623778 - MGP_BALBcJ_P0081903 protein_coding protein_coding MGP_BALBcJ_T0102002.1 MGP_BALBcJ_G0039842.1 mouse_genomes_project 7 106146329 106149922 - translated_unprocessed_pseudogene translated_unprocessed_pseudogene MGP_BALBcJ_T0102746.1 MGP_BALBcJ_G0040561.1 mouse_genomes_project 7 43317875 43319491 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100077.1 MGP_BALBcJ_G0038113.1 mouse_genomes_project 7 87973634 87973698 - Gm24249 snRNA snRNA MGP_BALBcJ_T0084361.1 MGP_BALBcJ_G0032343.1 mouse_genomes_project 7 65976012 66012509 - MGP_BALBcJ_P0084361 Aldh1a3 protein_coding protein_coding MGP_BALBcJ_T0084362.1 MGP_BALBcJ_G0032343.1 mouse_genomes_project 7 65985081 65991157 - Aldh1a3 protein_coding retained_intron MGP_BALBcJ_T0084363.1 MGP_BALBcJ_G0032343.1 mouse_genomes_project 7 65987217 66004221 - MGP_BALBcJ_P0084363 Aldh1a3 protein_coding protein_coding MGP_BALBcJ_T0084364.1 MGP_BALBcJ_G0032343.1 mouse_genomes_project 7 65993655 66011581 - Aldh1a3 protein_coding processed_transcript MGP_BALBcJ_T0084365.1 MGP_BALBcJ_G0032343.1 mouse_genomes_project 7 65993903 66010693 - Aldh1a3 protein_coding processed_transcript MGP_BALBcJ_T0015854.1 MGP_BALBcJ_G0013951.1 mouse_genomes_project 7 100592160 100592597 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085973.1 MGP_BALBcJ_G0032857.1 mouse_genomes_project 7 112741297 112790384 + MGP_BALBcJ_P0085973 Micalcl protein_coding protein_coding MGP_BALBcJ_T0085974.1 MGP_BALBcJ_G0032857.1 mouse_genomes_project 7 112751606 112772623 + MGP_BALBcJ_P0085974 Micalcl protein_coding protein_coding MGP_BALBcJ_T0085975.1 MGP_BALBcJ_G0032857.1 mouse_genomes_project 7 112752129 112790378 + MGP_BALBcJ_P0085975 Micalcl protein_coding protein_coding MGP_BALBcJ_T0085976.1 MGP_BALBcJ_G0032857.1 mouse_genomes_project 7 112758416 112790378 + MGP_BALBcJ_P0085976 Micalcl protein_coding protein_coding MGP_BALBcJ_T0085977.1 MGP_BALBcJ_G0032857.1 mouse_genomes_project 7 112784394 112790329 + Micalcl protein_coding retained_intron MGP_BALBcJ_T0010847.1 MGP_BALBcJ_G0008972.1 mouse_genomes_project 7 44377955 44378017 - Mir7054 miRNA miRNA MGP_BALBcJ_T0086419.1 MGP_BALBcJ_G0032956.1 mouse_genomes_project 7 126013795 126041422 + MGP_BALBcJ_P0086419 Il4ra protein_coding protein_coding MGP_BALBcJ_T0086420.1 MGP_BALBcJ_G0032956.1 mouse_genomes_project 7 126013946 126034238 + Il4ra protein_coding retained_intron MGP_BALBcJ_T0086421.1 MGP_BALBcJ_G0032956.1 mouse_genomes_project 7 126013946 126028932 + MGP_BALBcJ_P0086421 Il4ra protein_coding protein_coding MGP_BALBcJ_T0086422.1 MGP_BALBcJ_G0032956.1 mouse_genomes_project 7 126013951 126031920 + MGP_BALBcJ_P0086422 Il4ra protein_coding protein_coding MGP_BALBcJ_T0086423.1 MGP_BALBcJ_G0032956.1 mouse_genomes_project 7 126013962 126039917 + MGP_BALBcJ_P0086423 Il4ra protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015822.1 MGP_BALBcJ_G0013919.1 mouse_genomes_project 7 80227944 80228412 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081606.1 MGP_BALBcJ_G0031627.1 mouse_genomes_project 7 9917845 9940070 - MGP_BALBcJ_P0081606 protein_coding protein_coding MGP_BALBcJ_T0082539.1 MGP_BALBcJ_G0031898.1 mouse_genomes_project 7 25741497 25763139 + MGP_BALBcJ_P0082539 Prx protein_coding protein_coding MGP_BALBcJ_T0082540.1 MGP_BALBcJ_G0031898.1 mouse_genomes_project 7 25747996 25762759 + MGP_BALBcJ_P0082540 Prx protein_coding protein_coding MGP_BALBcJ_T0082541.1 MGP_BALBcJ_G0031898.1 mouse_genomes_project 7 25750820 25762966 + MGP_BALBcJ_P0082541 Prx protein_coding protein_coding MGP_BALBcJ_T0002247.1 MGP_BALBcJ_G0002159.1 mouse_genomes_project 7 73085497 73087539 - TEC TEC MGP_BALBcJ_T0086796.1 MGP_BALBcJ_G0033016.1 mouse_genomes_project 7 127740078 127753601 + MGP_BALBcJ_P0086796 Zfp771 protein_coding protein_coding MGP_BALBcJ_T0086797.1 MGP_BALBcJ_G0033016.1 mouse_genomes_project 7 127744148 127744759 + Zfp771 protein_coding processed_transcript MGP_BALBcJ_T0086798.1 MGP_BALBcJ_G0033016.1 mouse_genomes_project 7 127744234 127752670 + MGP_BALBcJ_P0086798 Zfp771 protein_coding protein_coding MGP_BALBcJ_T0005189.1 MGP_BALBcJ_G0004416.1 mouse_genomes_project 7 43854106 43856655 + Gm44646 antisense antisense MGP_BALBcJ_T0087088.1 MGP_BALBcJ_G0033071.1 mouse_genomes_project 7 129769599 129904400 + MGP_BALBcJ_P0087088 Plpp4 protein_coding protein_coding MGP_BALBcJ_T0087089.1 MGP_BALBcJ_G0033071.1 mouse_genomes_project 7 129769606 129837480 + Plpp4 protein_coding retained_intron MGP_BALBcJ_T0087090.1 MGP_BALBcJ_G0033071.1 mouse_genomes_project 7 129769615 129821113 + Plpp4 protein_coding processed_transcript MGP_BALBcJ_T0087091.1 MGP_BALBcJ_G0033071.1 mouse_genomes_project 7 129769617 129904295 + MGP_BALBcJ_P0087091 Plpp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087092.1 MGP_BALBcJ_G0033071.1 mouse_genomes_project 7 129821092 129904407 + MGP_BALBcJ_P0087092 Plpp4 protein_coding protein_coding MGP_BALBcJ_T0081797.1 MGP_BALBcJ_G0031688.1 mouse_genomes_project 7 13981013 14017789 + MGP_BALBcJ_P0081797 Zc3h4 protein_coding unknown_likely_coding MGP_BALBcJ_T0081798.1 MGP_BALBcJ_G0031688.1 mouse_genomes_project 7 13981328 14017786 + MGP_BALBcJ_P0081798 Zc3h4 protein_coding protein_coding MGP_BALBcJ_T0010888.1 MGP_BALBcJ_G0009013.1 mouse_genomes_project 7 96216119 96216218 + Mir6394 miRNA miRNA MGP_BALBcJ_T0085682.1 MGP_BALBcJ_G0032742.1 mouse_genomes_project 7 105716792 105725432 - MGP_BALBcJ_P0085682 Hpx protein_coding protein_coding MGP_BALBcJ_T0085683.1 MGP_BALBcJ_G0032742.1 mouse_genomes_project 7 105716861 105725406 - MGP_BALBcJ_P0085683 Hpx protein_coding unknown_likely_coding MGP_BALBcJ_T0081490.1 MGP_BALBcJ_G0031563.1 mouse_genomes_project 7 2057548 2061886 + MGP_BALBcJ_P0081490 protein_coding protein_coding MGP_BALBcJ_T0002193.1 MGP_BALBcJ_G0002105.1 mouse_genomes_project 7 15531267 15533441 - TEC TEC MGP_BALBcJ_T0087495.1 MGP_BALBcJ_G0033182.1 mouse_genomes_project 7 141610708 141612212 - MGP_BALBcJ_P0087495 Cox8b protein_coding protein_coding MGP_BALBcJ_T0015742.1 MGP_BALBcJ_G0013839.1 mouse_genomes_project 7 29607361 29608148 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010869.1 MGP_BALBcJ_G0008994.1 mouse_genomes_project 7 61349728 61349820 - Mir344c miRNA miRNA MGP_BALBcJ_T0009031.1 MGP_BALBcJ_G0007266.1 mouse_genomes_project 7 135057424 135131199 - Gm4593 lincRNA lincRNA MGP_BALBcJ_T0009032.1 MGP_BALBcJ_G0007266.1 mouse_genomes_project 7 135130405 135133380 - Gm4593 lincRNA lincRNA MGP_BALBcJ_T0015690.1 MGP_BALBcJ_G0013787.1 mouse_genomes_project 7 10787804 10788594 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008948.1 MGP_BALBcJ_G0007213.1 mouse_genomes_project 7 93905235 94215417 + lincRNA lincRNA MGP_BALBcJ_T0008949.1 MGP_BALBcJ_G0007213.1 mouse_genomes_project 7 93905296 94600692 + lincRNA lincRNA MGP_BALBcJ_T0015902.1 MGP_BALBcJ_G0013999.1 mouse_genomes_project 7 129565733 129566491 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085662.1 MGP_BALBcJ_G0032740.1 mouse_genomes_project 7 105678344 105682373 + MGP_BALBcJ_P0085662 Smpd1 protein_coding protein_coding MGP_BALBcJ_T0084629.1 MGP_BALBcJ_G0032394.1 mouse_genomes_project 7 79904799 79944804 + MGP_BALBcJ_P0084629 Sema4b protein_coding protein_coding MGP_BALBcJ_T0084630.1 MGP_BALBcJ_G0032394.1 mouse_genomes_project 7 79904836 79940161 + Sema4b protein_coding retained_intron MGP_BALBcJ_T0084631.1 MGP_BALBcJ_G0032394.1 mouse_genomes_project 7 79916388 79944688 + MGP_BALBcJ_P0084631 Sema4b protein_coding protein_coding MGP_BALBcJ_T0084632.1 MGP_BALBcJ_G0032394.1 mouse_genomes_project 7 79916483 79932386 + Sema4b protein_coding retained_intron MGP_BALBcJ_T0081900.1 MGP_BALBcJ_G0031723.1 mouse_genomes_project 7 16526990 16538344 + MGP_BALBcJ_P0081900 protein_coding protein_coding MGP_BALBcJ_T0081901.1 MGP_BALBcJ_G0031723.1 mouse_genomes_project 7 16526990 16538347 + MGP_BALBcJ_P0081901 protein_coding protein_coding MGP_BALBcJ_T0100056.1 MGP_BALBcJ_G0038092.1 mouse_genomes_project 7 26385291 26385397 + Gm24356 snRNA snRNA MGP_BALBcJ_T0009018.1 MGP_BALBcJ_G0007256.1 mouse_genomes_project 7 129316071 129447179 + Gm44671 lincRNA lincRNA MGP_BALBcJ_T0084642.1 MGP_BALBcJ_G0032397.1 mouse_genomes_project 7 79967077 79981990 + MGP_BALBcJ_P0084642 Ttll13 protein_coding protein_coding MGP_BALBcJ_T0084643.1 MGP_BALBcJ_G0032397.1 mouse_genomes_project 7 79967126 79967506 + Ttll13 protein_coding retained_intron MGP_BALBcJ_T0084644.1 MGP_BALBcJ_G0032397.1 mouse_genomes_project 7 79967256 79980365 + Ttll13 protein_coding retained_intron MGP_BALBcJ_T0084645.1 MGP_BALBcJ_G0032397.1 mouse_genomes_project 7 79967696 79974075 + Ttll13 protein_coding retained_intron MGP_BALBcJ_T0084646.1 MGP_BALBcJ_G0032397.1 mouse_genomes_project 7 79968090 79981839 + MGP_BALBcJ_P0084646 Ttll13 protein_coding protein_coding MGP_BALBcJ_T0015895.1 MGP_BALBcJ_G0013992.1 mouse_genomes_project 7 128545532 128546614 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087202.1 MGP_BALBcJ_G0033096.1 mouse_genomes_project 7 133196625 133201385 - MGP_BALBcJ_P0087202 Nkx1-2 protein_coding protein_coding MGP_BALBcJ_T0018284.1 MGP_BALBcJ_G0015591.1 mouse_genomes_project 7 508808 521330 - Gm15927 processed_transcript antisense MGP_BALBcJ_T0018285.1 MGP_BALBcJ_G0015591.1 mouse_genomes_project 7 518998 519945 - Gm15927 processed_transcript antisense MGP_BALBcJ_T0018286.1 MGP_BALBcJ_G0015591.1 mouse_genomes_project 7 518999 521298 - Gm15927 processed_transcript retained_intron MGP_BALBcJ_T0018287.1 MGP_BALBcJ_G0015591.1 mouse_genomes_project 7 520792 521271 - Gm15927 processed_transcript processed_transcript MGP_BALBcJ_T0018288.1 MGP_BALBcJ_G0015591.1 mouse_genomes_project 7 521007 521581 - Gm15927 processed_transcript processed_transcript MGP_BALBcJ_T0102812.1 MGP_BALBcJ_G0040627.1 mouse_genomes_project 7 103758591 103760772 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102693.1 MGP_BALBcJ_G0040508.1 mouse_genomes_project 7 9742575 9757685 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082309.1 MGP_BALBcJ_G0031842.1 mouse_genomes_project 7 23275473 23281556 + MGP_BALBcJ_P0082309 Zfp526 protein_coding protein_coding MGP_BALBcJ_T0102783.1 MGP_BALBcJ_G0040598.1 mouse_genomes_project 7 84840693 84842791 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010845.1 MGP_BALBcJ_G0008970.1 mouse_genomes_project 7 43891315 43891388 - Mir7053 miRNA miRNA MGP_BALBcJ_T0083543.1 MGP_BALBcJ_G0032137.1 mouse_genomes_project 7 43128672 43133311 + MGP_BALBcJ_P0083543 Klk4 protein_coding protein_coding MGP_BALBcJ_T0085534.1 MGP_BALBcJ_G0032653.1 mouse_genomes_project 7 103693665 103694607 + MGP_BALBcJ_P0085534 Olfr615 protein_coding protein_coding MGP_BALBcJ_T0102815.1 MGP_BALBcJ_G0040630.1 mouse_genomes_project 7 103986028 103987116 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008842.1 MGP_BALBcJ_G0007140.1 mouse_genomes_project 7 39973602 40139866 - lincRNA lincRNA MGP_BALBcJ_T0083741.1 MGP_BALBcJ_G0032179.1 mouse_genomes_project 7 44325393 44341120 - MGP_BALBcJ_P0083741 Cpt1c protein_coding protein_coding MGP_BALBcJ_T0011685.1 MGP_BALBcJ_G0009810.1 mouse_genomes_project 7 144059176 144059400 + Gm27539 misc_RNA misc_RNA MGP_BALBcJ_T0008946.1 MGP_BALBcJ_G0007212.1 mouse_genomes_project 7 92894265 92922939 - Gm9934 lincRNA lincRNA MGP_BALBcJ_T0008947.1 MGP_BALBcJ_G0007212.1 mouse_genomes_project 7 92909274 92922707 - Gm9934 lincRNA lincRNA MGP_BALBcJ_T0100098.1 MGP_BALBcJ_G0038134.1 mouse_genomes_project 7 124422441 124422547 - Gm23788 snRNA snRNA MGP_BALBcJ_T0101314.1 MGP_BALBcJ_G0039350.1 mouse_genomes_project 7 43598526 43598616 + Snord88a snoRNA snoRNA MGP_BALBcJ_T0086003.1 MGP_BALBcJ_G0032863.1 mouse_genomes_project 7 113783195 113786194 - MGP_BALBcJ_P0086003 Pth protein_coding protein_coding MGP_BALBcJ_T0086744.1 MGP_BALBcJ_G0033006.1 mouse_genomes_project 7 127518366 127519595 - MGP_BALBcJ_P0086744 Kif22 protein_coding protein_coding MGP_BALBcJ_T0086745.1 MGP_BALBcJ_G0033006.1 mouse_genomes_project 7 127518368 127533898 - MGP_BALBcJ_P0086745 Kif22 protein_coding protein_coding MGP_BALBcJ_T0086746.1 MGP_BALBcJ_G0033006.1 mouse_genomes_project 7 127518369 127518754 - Kif22 protein_coding retained_intron MGP_BALBcJ_T0086747.1 MGP_BALBcJ_G0033006.1 mouse_genomes_project 7 127519741 127523342 - Kif22 protein_coding retained_intron MGP_BALBcJ_T0086748.1 MGP_BALBcJ_G0033006.1 mouse_genomes_project 7 127522865 127533836 - Kif22 protein_coding retained_intron MGP_BALBcJ_T0086749.1 MGP_BALBcJ_G0033006.1 mouse_genomes_project 7 127524222 127533833 - MGP_BALBcJ_P0086749 Kif22 protein_coding protein_coding MGP_BALBcJ_T0005152.1 MGP_BALBcJ_G0004389.1 mouse_genomes_project 7 25745600 25751137 - Gm15541 antisense antisense MGP_BALBcJ_T0005218.1 MGP_BALBcJ_G0004437.1 mouse_genomes_project 7 80123133 80125445 + Gm44851 antisense antisense MGP_BALBcJ_T0087257.1 MGP_BALBcJ_G0033105.1 mouse_genomes_project 7 134304594 134310326 - Mmp21 protein_coding retained_intron MGP_BALBcJ_T0087258.1 MGP_BALBcJ_G0033105.1 mouse_genomes_project 7 134304594 134310326 - MGP_BALBcJ_P0087258 Mmp21 protein_coding protein_coding MGP_BALBcJ_T0087259.1 MGP_BALBcJ_G0033105.1 mouse_genomes_project 7 134304680 134310326 - MGP_BALBcJ_P0087259 Mmp21 protein_coding protein_coding MGP_BALBcJ_T0081707.1 MGP_BALBcJ_G0031658.1 mouse_genomes_project 7 11303721 11394024 - MGP_BALBcJ_P0081707 Sult2a2 protein_coding protein_coding MGP_BALBcJ_T0083088.1 MGP_BALBcJ_G0032031.1 mouse_genomes_project 7 29252555 29254400 - MGP_BALBcJ_P0083088 Ffar3 protein_coding protein_coding MGP_BALBcJ_T0083089.1 MGP_BALBcJ_G0032031.1 mouse_genomes_project 7 29253155 29254389 - MGP_BALBcJ_P0083089 Ffar3 protein_coding protein_coding MGP_BALBcJ_T0087511.1 MGP_BALBcJ_G0033188.1 mouse_genomes_project 7 141734546 141735731 - MGP_BALBcJ_P0087511 Ifitm3 protein_coding protein_coding MGP_BALBcJ_T0100052.1 MGP_BALBcJ_G0038088.1 mouse_genomes_project 7 16351921 16352028 + Gm26062 snRNA snRNA MGP_BALBcJ_T0084478.1 MGP_BALBcJ_G0032365.1 mouse_genomes_project 7 75125556 75420983 + MGP_BALBcJ_P0084478 Akap13 protein_coding protein_coding MGP_BALBcJ_T0084479.1 MGP_BALBcJ_G0032365.1 mouse_genomes_project 7 75208276 75420988 + MGP_BALBcJ_P0084479 Akap13 protein_coding unknown_likely_coding MGP_BALBcJ_T0087457.1 MGP_BALBcJ_G0033174.1 mouse_genomes_project 7 141517915 141533022 - MGP_BALBcJ_P0087457 Zfp941 protein_coding protein_coding MGP_BALBcJ_T0087458.1 MGP_BALBcJ_G0033174.1 mouse_genomes_project 7 141520155 141532976 - MGP_BALBcJ_P0087458 Zfp941 protein_coding protein_coding MGP_BALBcJ_T0087459.1 MGP_BALBcJ_G0033174.1 mouse_genomes_project 7 141528930 141532990 - Zfp941 protein_coding processed_transcript MGP_BALBcJ_T0085602.1 MGP_BALBcJ_G0032699.1 mouse_genomes_project 7 104424396 104439258 - protein_coding retained_intron MGP_BALBcJ_T0085603.1 MGP_BALBcJ_G0032699.1 mouse_genomes_project 7 104424412 104427490 - MGP_BALBcJ_P0085603 protein_coding protein_coding MGP_BALBcJ_T0085604.1 MGP_BALBcJ_G0032699.1 mouse_genomes_project 7 104425687 104435565 - MGP_BALBcJ_P0085604 protein_coding protein_coding MGP_BALBcJ_T0085605.1 MGP_BALBcJ_G0032699.1 mouse_genomes_project 7 104426393 104427487 - protein_coding retained_intron MGP_BALBcJ_T0085606.1 MGP_BALBcJ_G0032699.1 mouse_genomes_project 7 104430237 104439156 - MGP_BALBcJ_P0085606 protein_coding protein_coding MGP_BALBcJ_T0087450.1 MGP_BALBcJ_G0033167.1 mouse_genomes_project 7 141351162 141352098 + MGP_BALBcJ_P0087450 Olfr61 protein_coding protein_coding MGP_BALBcJ_T0010850.1 MGP_BALBcJ_G0008975.1 mouse_genomes_project 7 44546002 44546061 + Mir7055 miRNA miRNA MGP_BALBcJ_T0099015.1 MGP_BALBcJ_G0037057.1 mouse_genomes_project 7 123495747 123496625 + Gm20274 sense_intronic sense_intronic MGP_BALBcJ_T0081392.1 MGP_BALBcJ_G0031532.1 mouse_genomes_project 7 1525330 1532111 - MGP_BALBcJ_P0081392 Syt5 protein_coding protein_coding MGP_BALBcJ_T0081393.1 MGP_BALBcJ_G0031532.1 mouse_genomes_project 7 1531231 1533085 - MGP_BALBcJ_P0081393 Syt5 protein_coding protein_coding MGP_BALBcJ_T0081394.1 MGP_BALBcJ_G0031532.1 mouse_genomes_project 7 1531836 1532517 - MGP_BALBcJ_P0081394 Syt5 protein_coding protein_coding MGP_BALBcJ_T0084766.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80636830 80680048 - Sec11a protein_coding processed_transcript MGP_BALBcJ_T0084767.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80639657 80680016 - MGP_BALBcJ_P0084767 Sec11a protein_coding protein_coding MGP_BALBcJ_T0084768.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647223 80657480 - Sec11a protein_coding processed_transcript MGP_BALBcJ_T0084769.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647223 80655383 - Sec11a protein_coding retained_intron MGP_BALBcJ_T0084770.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647223 80680283 - MGP_BALBcJ_P0084770 Sec11a protein_coding protein_coding MGP_BALBcJ_T0084771.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647412 80648177 - Sec11a protein_coding retained_intron MGP_BALBcJ_T0084772.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647507 80680283 - MGP_BALBcJ_P0084772 Sec11a protein_coding protein_coding MGP_BALBcJ_T0084773.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647609 80680014 - Sec11a protein_coding processed_transcript MGP_BALBcJ_T0084774.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80647935 80680283 - MGP_BALBcJ_P0084774 Sec11a protein_coding protein_coding MGP_BALBcJ_T0084775.1 MGP_BALBcJ_G0032413.1 mouse_genomes_project 7 80652719 80680245 - Sec11a protein_coding retained_intron MGP_BALBcJ_T0086801.1 MGP_BALBcJ_G0033019.1 mouse_genomes_project 7 127810277 127850369 + MGP_BALBcJ_P0086801 Itgal protein_coding protein_coding MGP_BALBcJ_T0086802.1 MGP_BALBcJ_G0033019.1 mouse_genomes_project 7 127810308 127850370 + MGP_BALBcJ_P0086802 Itgal protein_coding protein_coding MGP_BALBcJ_T0086803.1 MGP_BALBcJ_G0033019.1 mouse_genomes_project 7 127810332 127845729 + MGP_BALBcJ_P0086803 Itgal protein_coding protein_coding MGP_BALBcJ_T0086804.1 MGP_BALBcJ_G0033019.1 mouse_genomes_project 7 127810427 127848960 + MGP_BALBcJ_P0086804 Itgal protein_coding protein_coding MGP_BALBcJ_T0086805.1 MGP_BALBcJ_G0033019.1 mouse_genomes_project 7 127811447 127813593 + Itgal protein_coding processed_transcript MGP_BALBcJ_T0086806.1 MGP_BALBcJ_G0033019.1 mouse_genomes_project 7 127823654 127850369 + MGP_BALBcJ_P0086806 Itgal protein_coding protein_coding MGP_BALBcJ_T0082033.1 MGP_BALBcJ_G0031760.1 mouse_genomes_project 7 17340798 17348504 + MGP_BALBcJ_P0082033 protein_coding protein_coding MGP_BALBcJ_T0087903.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144589181 144616766 - MGP_BALBcJ_P0087903 Nadsyn1 protein_coding protein_coding MGP_BALBcJ_T0087904.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144589447 144616712 - MGP_BALBcJ_P0087904 Nadsyn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087905.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144589466 144616767 - MGP_BALBcJ_P0087905 Nadsyn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087906.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144591450 144592443 - Nadsyn1 protein_coding retained_intron MGP_BALBcJ_T0087907.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144606694 144616743 - MGP_BALBcJ_P0087907 Nadsyn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087908.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144607217 144616673 - Nadsyn1 protein_coding retained_intron MGP_BALBcJ_T0087909.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144607355 144616730 - MGP_BALBcJ_P0087909 Nadsyn1 protein_coding protein_coding MGP_BALBcJ_T0087910.1 MGP_BALBcJ_G0033266.1 mouse_genomes_project 7 144609269 144616774 - Nadsyn1 protein_coding retained_intron MGP_BALBcJ_T0100066.1 MGP_BALBcJ_G0038102.1 mouse_genomes_project 7 52524759 52524867 + Gm22444 snRNA snRNA MGP_BALBcJ_T0084508.1 MGP_BALBcJ_G0032369.1 mouse_genomes_project 7 78469207 78477350 - MGP_BALBcJ_P0084508 Mrpl46 protein_coding protein_coding MGP_BALBcJ_T0084509.1 MGP_BALBcJ_G0032369.1 mouse_genomes_project 7 78469571 78477792 - Mrpl46 protein_coding processed_transcript MGP_BALBcJ_T0084072.1 MGP_BALBcJ_G0032270.1 mouse_genomes_project 7 46426261 46444279 - MGP_BALBcJ_P0084072 Spty2d1 protein_coding protein_coding MGP_BALBcJ_T0099012.1 MGP_BALBcJ_G0037055.1 mouse_genomes_project 7 116714187 116715410 - Gm44867 sense_intronic sense_intronic MGP_BALBcJ_T0099013.1 MGP_BALBcJ_G0037055.1 mouse_genomes_project 7 116714187 116715552 - Gm44867 sense_intronic sense_intronic MGP_BALBcJ_T0015858.1 MGP_BALBcJ_G0013955.1 mouse_genomes_project 7 103981610 103981872 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084366.1 MGP_BALBcJ_G0032344.1 mouse_genomes_project 7 66222112 66267464 - MGP_BALBcJ_P0084366 Asb7 protein_coding protein_coding MGP_BALBcJ_T0084367.1 MGP_BALBcJ_G0032344.1 mouse_genomes_project 7 66222112 66266413 - MGP_BALBcJ_P0084367 Asb7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084368.1 MGP_BALBcJ_G0032344.1 mouse_genomes_project 7 66254565 66267342 - MGP_BALBcJ_P0084368 Asb7 protein_coding protein_coding MGP_BALBcJ_T0102805.1 MGP_BALBcJ_G0040620.1 mouse_genomes_project 7 102601626 102602561 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087918.1 MGP_BALBcJ_G0033268.1 mouse_genomes_project 7 144646643 144652552 + Gm498 protein_coding processed_transcript MGP_BALBcJ_T0087919.1 MGP_BALBcJ_G0033268.1 mouse_genomes_project 7 144648940 144680325 + MGP_BALBcJ_P0087919 Gm498 protein_coding protein_coding MGP_BALBcJ_T0087920.1 MGP_BALBcJ_G0033268.1 mouse_genomes_project 7 144648946 144681322 + MGP_BALBcJ_P0087920 Gm498 protein_coding protein_coding MGP_BALBcJ_T0081433.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727909 1729090 - MGP_BALBcJ_P0081433 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0081434.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727909 1729141 - MGP_BALBcJ_P0081434 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0081435.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727909 1729141 - MGP_BALBcJ_P0081435 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0081436.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727909 1729212 - MGP_BALBcJ_P0081436 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0081437.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727911 1729127 - MGP_BALBcJ_P0081437 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0081438.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727912 1729141 - MGP_BALBcJ_P0081438 Cox6b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081439.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1727972 1729156 - MGP_BALBcJ_P0081439 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0081440.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1728042 1728646 - Cox6b2 protein_coding retained_intron MGP_BALBcJ_T0081441.1 MGP_BALBcJ_G0031540.1 mouse_genomes_project 7 1728064 1729120 - MGP_BALBcJ_P0081441 Cox6b2 protein_coding protein_coding MGP_BALBcJ_T0087469.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141567796 141575075 + MGP_BALBcJ_P0087469 Ric8a protein_coding protein_coding MGP_BALBcJ_T0087470.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141568659 141569687 + Ric8a protein_coding retained_intron MGP_BALBcJ_T0087471.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141568766 141569903 + Ric8a protein_coding processed_transcript MGP_BALBcJ_T0087472.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141568786 141569887 + Ric8a protein_coding processed_transcript MGP_BALBcJ_T0087473.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141569043 141574304 + Ric8a protein_coding retained_intron MGP_BALBcJ_T0087474.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141569506 141571079 + Ric8a protein_coding processed_transcript MGP_BALBcJ_T0087475.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141571986 141574488 + Ric8a protein_coding retained_intron MGP_BALBcJ_T0087476.1 MGP_BALBcJ_G0033179.1 mouse_genomes_project 7 141572517 141573964 + Ric8a protein_coding retained_intron MGP_BALBcJ_T0083952.1 MGP_BALBcJ_G0032239.1 mouse_genomes_project 7 45204521 45211176 - MGP_BALBcJ_P0083952 Cyth2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083953.1 MGP_BALBcJ_G0032239.1 mouse_genomes_project 7 45204531 45211156 - MGP_BALBcJ_P0083953 Cyth2 protein_coding protein_coding MGP_BALBcJ_T0083954.1 MGP_BALBcJ_G0032239.1 mouse_genomes_project 7 45204643 45210990 - MGP_BALBcJ_P0083954 Cyth2 protein_coding protein_coding MGP_BALBcJ_T0083955.1 MGP_BALBcJ_G0032239.1 mouse_genomes_project 7 45206928 45211146 - Cyth2 protein_coding processed_transcript MGP_BALBcJ_T0083956.1 MGP_BALBcJ_G0032239.1 mouse_genomes_project 7 45207728 45211455 - MGP_BALBcJ_P0083956 Cyth2 protein_coding protein_coding MGP_BALBcJ_T0083957.1 MGP_BALBcJ_G0032239.1 mouse_genomes_project 7 45208397 45211135 - Cyth2 protein_coding processed_transcript MGP_BALBcJ_T0083838.1 MGP_BALBcJ_G0032209.1 mouse_genomes_project 7 44781660 44787084 + MGP_BALBcJ_P0083838 Kcna7 protein_coding protein_coding MGP_BALBcJ_T0081709.1 MGP_BALBcJ_G0031660.1 mouse_genomes_project 7 11656322 11692614 - MGP_BALBcJ_P0081709 Sult2a6 protein_coding protein_coding MGP_BALBcJ_T0081710.1 MGP_BALBcJ_G0031660.1 mouse_genomes_project 7 11656330 11692614 - MGP_BALBcJ_P0081710 Sult2a6 protein_coding protein_coding MGP_BALBcJ_T0082668.1 MGP_BALBcJ_G0031935.1 mouse_genomes_project 7 26823988 26824690 + MGP_BALBcJ_P0082668 Gm10053 protein_coding protein_coding MGP_BALBcJ_T0081580.1 MGP_BALBcJ_G0031609.1 mouse_genomes_project 7 7872692 7873589 + MGP_BALBcJ_P0081580 Vmn1r70 protein_coding protein_coding MGP_BALBcJ_T0083588.1 MGP_BALBcJ_G0032151.1 mouse_genomes_project 7 43734423 43750609 + MGP_BALBcJ_P0083588 Syt3 protein_coding protein_coding MGP_BALBcJ_T0083589.1 MGP_BALBcJ_G0032151.1 mouse_genomes_project 7 43734448 43735768 + Syt3 protein_coding processed_transcript MGP_BALBcJ_T0083590.1 MGP_BALBcJ_G0032151.1 mouse_genomes_project 7 43734475 43750767 + MGP_BALBcJ_P0083590 Syt3 protein_coding protein_coding MGP_BALBcJ_T0083591.1 MGP_BALBcJ_G0032151.1 mouse_genomes_project 7 43734925 43736370 + MGP_BALBcJ_P0083591 Syt3 protein_coding protein_coding MGP_BALBcJ_T0083592.1 MGP_BALBcJ_G0032151.1 mouse_genomes_project 7 43734925 43736440 + MGP_BALBcJ_P0083592 Syt3 protein_coding protein_coding MGP_BALBcJ_T0083593.1 MGP_BALBcJ_G0032151.1 mouse_genomes_project 7 43735189 43750343 + MGP_BALBcJ_P0083593 Syt3 protein_coding protein_coding MGP_BALBcJ_T0010919.1 MGP_BALBcJ_G0009044.1 mouse_genomes_project 7 144339487 144339576 - Mir7064 miRNA miRNA MGP_BALBcJ_T0008779.1 MGP_BALBcJ_G0007088.1 mouse_genomes_project 7 959595 961323 + 1700095K22Rik lincRNA lincRNA MGP_BALBcJ_T0100085.1 MGP_BALBcJ_G0038121.1 mouse_genomes_project 7 104407166 104407274 - Gm24846 snRNA snRNA MGP_BALBcJ_T0082206.1 MGP_BALBcJ_G0031818.1 mouse_genomes_project 7 22564706 22569546 - MGP_BALBcJ_P0082206 Pinlyp protein_coding protein_coding MGP_BALBcJ_T0005202.1 MGP_BALBcJ_G0004426.1 mouse_genomes_project 7 72938949 73002243 - A730056A06Rik antisense antisense MGP_BALBcJ_T0005203.1 MGP_BALBcJ_G0004426.1 mouse_genomes_project 7 72941191 73002252 - A730056A06Rik antisense antisense MGP_BALBcJ_T0081657.1 MGP_BALBcJ_G0031641.1 mouse_genomes_project 7 10394813 10397586 - MGP_BALBcJ_P0081657 Chmp2a protein_coding protein_coding MGP_BALBcJ_T0085139.1 MGP_BALBcJ_G0032524.1 mouse_genomes_project 7 98361741 98399269 + MGP_BALBcJ_P0085139 Gucy2d protein_coding protein_coding MGP_BALBcJ_T0085140.1 MGP_BALBcJ_G0032524.1 mouse_genomes_project 7 98364754 98399268 + MGP_BALBcJ_P0085140 Gucy2d protein_coding protein_coding MGP_BALBcJ_T0085141.1 MGP_BALBcJ_G0032524.1 mouse_genomes_project 7 98389472 98396955 + MGP_BALBcJ_P0085141 Gucy2d protein_coding protein_coding MGP_BALBcJ_T0085142.1 MGP_BALBcJ_G0032524.1 mouse_genomes_project 7 98393307 98399268 + Gucy2d protein_coding processed_transcript MGP_BALBcJ_T0005154.1 MGP_BALBcJ_G0004391.1 mouse_genomes_project 7 27471252 27472880 - Gm16282 antisense antisense MGP_BALBcJ_T0102729.1 MGP_BALBcJ_G0040544.1 mouse_genomes_project 7 32403761 32404587 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015707.1 MGP_BALBcJ_G0013804.1 mouse_genomes_project 7 14233106 14233513 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008852.1 MGP_BALBcJ_G0007148.1 mouse_genomes_project 7 44615176 44632716 + lincRNA lincRNA MGP_BALBcJ_T0008853.1 MGP_BALBcJ_G0007148.1 mouse_genomes_project 7 44632677 44646961 + lincRNA lincRNA MGP_BALBcJ_T0102809.1 MGP_BALBcJ_G0040624.1 mouse_genomes_project 7 103273459 103274312 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015715.1 MGP_BALBcJ_G0013812.1 mouse_genomes_project 7 15953633 15955152 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100050.1 MGP_BALBcJ_G0038086.1 mouse_genomes_project 7 14210371 14210474 - Gm24708 snRNA snRNA MGP_BALBcJ_T0010839.1 MGP_BALBcJ_G0008964.1 mouse_genomes_project 7 28939275 28939352 + Gm38670 miRNA miRNA MGP_BALBcJ_T0087693.1 MGP_BALBcJ_G0033220.1 mouse_genomes_project 7 142303192 142375560 + MGP_BALBcJ_P0087693 Ap2a2 protein_coding protein_coding MGP_BALBcJ_T0087694.1 MGP_BALBcJ_G0033220.1 mouse_genomes_project 7 142303227 142345859 + Ap2a2 protein_coding retained_intron MGP_BALBcJ_T0087695.1 MGP_BALBcJ_G0033220.1 mouse_genomes_project 7 142303549 142341559 + MGP_BALBcJ_P0087695 Ap2a2 protein_coding protein_coding MGP_BALBcJ_T0100104.1 MGP_BALBcJ_G0038140.1 mouse_genomes_project 7 129255102 129255204 + Gm23783 snRNA snRNA MGP_BALBcJ_T0085366.1 MGP_BALBcJ_G0032576.1 mouse_genomes_project 7 101883071 101888063 - MGP_BALBcJ_P0085366 Folr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0102691.1 MGP_BALBcJ_G0040506.1 mouse_genomes_project 7 9725998 9726610 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087874.1 MGP_BALBcJ_G0033256.1 mouse_genomes_project 7 144229222 144267128 + MGP_BALBcJ_P0087874 Slc22a18 protein_coding protein_coding MGP_BALBcJ_T0087875.1 MGP_BALBcJ_G0033256.1 mouse_genomes_project 7 144241507 144244089 + Slc22a18 protein_coding processed_transcript MGP_BALBcJ_T0087876.1 MGP_BALBcJ_G0033256.1 mouse_genomes_project 7 144241554 144264909 + MGP_BALBcJ_P0087876 Slc22a18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087877.1 MGP_BALBcJ_G0033256.1 mouse_genomes_project 7 144241566 144267190 + MGP_BALBcJ_P0087877 Slc22a18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087878.1 MGP_BALBcJ_G0033256.1 mouse_genomes_project 7 144241591 144264910 + MGP_BALBcJ_P0087878 Slc22a18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005234.1 MGP_BALBcJ_G0004448.1 mouse_genomes_project 7 96723970 96729032 - Gm15416 antisense antisense MGP_BALBcJ_T0082029.1 MGP_BALBcJ_G0031757.1 mouse_genomes_project 7 17258139 17268543 + MGP_BALBcJ_P0082029 Ckm protein_coding protein_coding MGP_BALBcJ_T0008987.1 MGP_BALBcJ_G0007237.1 mouse_genomes_project 7 124964286 124982033 - Gm15339 lincRNA lincRNA MGP_BALBcJ_T0081277.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585435 588851 + MGP_BALBcJ_P0081277 Rps9 protein_coding protein_coding MGP_BALBcJ_T0081278.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585480 588849 + MGP_BALBcJ_P0081278 Rps9 protein_coding protein_coding MGP_BALBcJ_T0081279.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585483 586320 + Rps9 protein_coding retained_intron MGP_BALBcJ_T0081280.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585484 586164 + MGP_BALBcJ_P0081280 Rps9 protein_coding protein_coding MGP_BALBcJ_T0081281.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585490 587388 + Rps9 protein_coding retained_intron MGP_BALBcJ_T0081282.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585494 588814 + MGP_BALBcJ_P0081282 Rps9 protein_coding protein_coding MGP_BALBcJ_T0081283.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585762 588830 + MGP_BALBcJ_P0081283 Rps9 protein_coding protein_coding MGP_BALBcJ_T0081284.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585767 588339 + MGP_BALBcJ_P0081284 Rps9 protein_coding protein_coding MGP_BALBcJ_T0081285.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 585806 588848 + MGP_BALBcJ_P0081285 Rps9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081286.1 MGP_BALBcJ_G0031513.1 mouse_genomes_project 7 587574 588186 + Rps9 protein_coding retained_intron MGP_BALBcJ_T0101759.1 MGP_BALBcJ_G0039715.1 mouse_genomes_project 7 38401657 38401996 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101760.1 MGP_BALBcJ_G0039715.1 mouse_genomes_project 7 38401930 38405108 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0005223.1 MGP_BALBcJ_G0004441.1 mouse_genomes_project 7 83362860 83397613 - Gm16638 antisense antisense MGP_BALBcJ_T0086554.1 MGP_BALBcJ_G0032977.1 mouse_genomes_project 7 127101612 127104040 - MGP_BALBcJ_P0086554 Nupr1 protein_coding protein_coding MGP_BALBcJ_T0086555.1 MGP_BALBcJ_G0032977.1 mouse_genomes_project 7 127101615 127105372 - Nupr1 protein_coding retained_intron MGP_BALBcJ_T0086556.1 MGP_BALBcJ_G0032977.1 mouse_genomes_project 7 127101641 127103708 - MGP_BALBcJ_P0086556 Nupr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086557.1 MGP_BALBcJ_G0032977.1 mouse_genomes_project 7 127101805 127103839 - MGP_BALBcJ_P0086557 Nupr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086558.1 MGP_BALBcJ_G0032977.1 mouse_genomes_project 7 127103311 127104378 - Nupr1 protein_coding processed_transcript MGP_BALBcJ_T0086559.1 MGP_BALBcJ_G0032977.1 mouse_genomes_project 7 127103311 127109000 - Nupr1 protein_coding processed_transcript MGP_BALBcJ_T0081923.1 MGP_BALBcJ_G0031732.1 mouse_genomes_project 7 16823569 16833855 + MGP_BALBcJ_P0081923 Mypop protein_coding protein_coding MGP_BALBcJ_T0081924.1 MGP_BALBcJ_G0031732.1 mouse_genomes_project 7 16823643 16833857 + MGP_BALBcJ_P0081924 Mypop protein_coding protein_coding MGP_BALBcJ_T0081925.1 MGP_BALBcJ_G0031732.1 mouse_genomes_project 7 16824293 16825425 + Mypop protein_coding retained_intron MGP_BALBcJ_T0015775.1 MGP_BALBcJ_G0013872.1 mouse_genomes_project 7 42748942 42749495 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102723.1 MGP_BALBcJ_G0040538.1 mouse_genomes_project 7 29676378 29676765 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084254.1 MGP_BALBcJ_G0032323.1 mouse_genomes_project 7 63498266 63551480 - MGP_BALBcJ_P0084254 Klf13 protein_coding protein_coding MGP_BALBcJ_T0084255.1 MGP_BALBcJ_G0032323.1 mouse_genomes_project 7 63503018 63548909 - MGP_BALBcJ_P0084255 Klf13 protein_coding protein_coding MGP_BALBcJ_T0084256.1 MGP_BALBcJ_G0032323.1 mouse_genomes_project 7 63503036 63537105 - MGP_BALBcJ_P0084256 Klf13 protein_coding protein_coding MGP_BALBcJ_T0084258.1 MGP_BALBcJ_G0032323.1 mouse_genomes_project 7 63548006 63548940 - Klf13 protein_coding retained_intron MGP_BALBcJ_T0087829.1 MGP_BALBcJ_G0033248.1 mouse_genomes_project 7 143648128 143686741 - MGP_BALBcJ_P0087829 Th protein_coding protein_coding MGP_BALBcJ_T0087830.1 MGP_BALBcJ_G0033248.1 mouse_genomes_project 7 143648128 143655382 - MGP_BALBcJ_P0087830 Th protein_coding protein_coding MGP_BALBcJ_T0087831.1 MGP_BALBcJ_G0033248.1 mouse_genomes_project 7 143648342 143655329 - MGP_BALBcJ_P0087831 Th protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087832.1 MGP_BALBcJ_G0033248.1 mouse_genomes_project 7 143649774 143651977 - MGP_BALBcJ_P0087832 Th protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087833.1 MGP_BALBcJ_G0033248.1 mouse_genomes_project 7 143649802 143655334 - MGP_BALBcJ_P0087833 Th protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087834.1 MGP_BALBcJ_G0033248.1 mouse_genomes_project 7 143651965 143686733 - MGP_BALBcJ_P0087834 Th protein_coding protein_coding MGP_BALBcJ_T0085800.1 MGP_BALBcJ_G0032790.1 mouse_genomes_project 7 108244812 108246510 + MGP_BALBcJ_P0085800 Olfr473 protein_coding protein_coding MGP_BALBcJ_T0085223.1 MGP_BALBcJ_G0032548.1 mouse_genomes_project 7 100110927 100112953 + MGP_BALBcJ_P0085223 Lipt2 protein_coding protein_coding MGP_BALBcJ_T0084877.1 MGP_BALBcJ_G0032442.1 mouse_genomes_project 7 83517729 83518781 + MGP_BALBcJ_P0084877 protein_coding protein_coding MGP_BALBcJ_T0086416.1 MGP_BALBcJ_G0032955.1 mouse_genomes_project 7 125934376 125958417 - MGP_BALBcJ_P0086416 Nsmce1 protein_coding protein_coding MGP_BALBcJ_T0086417.1 MGP_BALBcJ_G0032955.1 mouse_genomes_project 7 125937805 125958220 - MGP_BALBcJ_P0086417 Nsmce1 protein_coding protein_coding MGP_BALBcJ_T0086418.1 MGP_BALBcJ_G0032955.1 mouse_genomes_project 7 125937859 125945255 - Nsmce1 protein_coding processed_transcript MGP_BALBcJ_T0085807.1 MGP_BALBcJ_G0032797.1 mouse_genomes_project 7 108384325 108385264 + MGP_BALBcJ_P0085807 Olfr481 protein_coding protein_coding MGP_BALBcJ_T0008861.1 MGP_BALBcJ_G0007155.1 mouse_genomes_project 7 63652030 63658507 - Gm45054 lincRNA lincRNA MGP_BALBcJ_T0008944.1 MGP_BALBcJ_G0007210.1 mouse_genomes_project 7 92585228 92589137 + Gm26981 lincRNA lincRNA MGP_BALBcJ_T0083502.1 MGP_BALBcJ_G0032120.1 mouse_genomes_project 7 42770920 42776023 - MGP_BALBcJ_P0083502 Cd33 protein_coding protein_coding MGP_BALBcJ_T0083503.1 MGP_BALBcJ_G0032120.1 mouse_genomes_project 7 42771451 42775600 - MGP_BALBcJ_P0083503 Cd33 protein_coding protein_coding MGP_BALBcJ_T0083504.1 MGP_BALBcJ_G0032120.1 mouse_genomes_project 7 42771787 42776337 - MGP_BALBcJ_P0083504 Cd33 protein_coding protein_coding MGP_BALBcJ_T0083505.1 MGP_BALBcJ_G0032120.1 mouse_genomes_project 7 42773277 42776009 - Cd33 protein_coding retained_intron MGP_BALBcJ_T0083506.1 MGP_BALBcJ_G0032120.1 mouse_genomes_project 7 42774964 42775876 - Cd33 protein_coding processed_transcript MGP_BALBcJ_T0008865.1 MGP_BALBcJ_G0007158.1 mouse_genomes_project 7 65151476 65208434 - lincRNA lincRNA MGP_BALBcJ_T0015743.1 MGP_BALBcJ_G0013840.1 mouse_genomes_project 7 31861927 31862408 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081527.1 MGP_BALBcJ_G0031580.1 mouse_genomes_project 7 3339688 3369872 + MGP_BALBcJ_P0081527 Gm6792 protein_coding protein_coding MGP_BALBcJ_T0081528.1 MGP_BALBcJ_G0031580.1 mouse_genomes_project 7 3346270 3370079 + Gm6792 protein_coding processed_transcript MGP_BALBcJ_T0081529.1 MGP_BALBcJ_G0031580.1 mouse_genomes_project 7 3348549 3369872 + MGP_BALBcJ_P0081529 Gm6792 protein_coding protein_coding MGP_BALBcJ_T0008952.1 MGP_BALBcJ_G0007216.1 mouse_genomes_project 7 98464805 98485136 - A630091E08Rik lincRNA lincRNA MGP_BALBcJ_T0083054.1 MGP_BALBcJ_G0032024.1 mouse_genomes_project 7 29098394 29106983 + Atp4a protein_coding retained_intron MGP_BALBcJ_T0083055.1 MGP_BALBcJ_G0032024.1 mouse_genomes_project 7 29098394 29111693 + MGP_BALBcJ_P0083055 Atp4a protein_coding protein_coding MGP_BALBcJ_T0083056.1 MGP_BALBcJ_G0032024.1 mouse_genomes_project 7 29098417 29111692 + MGP_BALBcJ_P0083056 Atp4a protein_coding protein_coding MGP_BALBcJ_T0083057.1 MGP_BALBcJ_G0032024.1 mouse_genomes_project 7 29104011 29106732 + MGP_BALBcJ_P0083057 Atp4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083058.1 MGP_BALBcJ_G0032024.1 mouse_genomes_project 7 29108513 29111349 + Atp4a protein_coding retained_intron MGP_BALBcJ_T0082606.1 MGP_BALBcJ_G0031916.1 mouse_genomes_project 7 26392981 26437482 + MGP_BALBcJ_P0082606 9530053A07Rik protein_coding protein_coding MGP_BALBcJ_T0082607.1 MGP_BALBcJ_G0031916.1 mouse_genomes_project 7 26393331 26407238 + 9530053A07Rik protein_coding retained_intron MGP_BALBcJ_T0082608.1 MGP_BALBcJ_G0031916.1 mouse_genomes_project 7 26393331 26404915 + 9530053A07Rik protein_coding retained_intron MGP_BALBcJ_T0082609.1 MGP_BALBcJ_G0031916.1 mouse_genomes_project 7 26393331 26437466 + MGP_BALBcJ_P0082609 9530053A07Rik protein_coding protein_coding MGP_BALBcJ_T0084241.1 MGP_BALBcJ_G0032315.1 mouse_genomes_project 7 59298856 59321712 - MGP_BALBcJ_P0084241 Snrpn protein_coding protein_coding MGP_BALBcJ_T0084242.1 MGP_BALBcJ_G0032315.1 mouse_genomes_project 7 59298863 59460325 - MGP_BALBcJ_P0084242 Snrpn protein_coding protein_coding MGP_BALBcJ_T0081908.1 MGP_BALBcJ_G0031727.1 mouse_genomes_project 7 16692591 16709231 + Pglyrp1 protein_coding processed_transcript MGP_BALBcJ_T0081909.1 MGP_BALBcJ_G0031727.1 mouse_genomes_project 7 16692591 16710291 + Pglyrp1 protein_coding processed_transcript MGP_BALBcJ_T0081910.1 MGP_BALBcJ_G0031727.1 mouse_genomes_project 7 16704591 16710273 + MGP_BALBcJ_P0081910 Pglyrp1 protein_coding protein_coding MGP_BALBcJ_T0081911.1 MGP_BALBcJ_G0031727.1 mouse_genomes_project 7 16704604 16705524 + Pglyrp1 protein_coding retained_intron MGP_BALBcJ_T0084900.1 MGP_BALBcJ_G0032451.1 mouse_genomes_project 7 84608228 84618506 + MGP_BALBcJ_P0084900 Olfr291 protein_coding protein_coding MGP_BALBcJ_T0081936.1 MGP_BALBcJ_G0031736.1 mouse_genomes_project 7 16888030 16907416 + MGP_BALBcJ_P0081936 Rsph6a protein_coding protein_coding MGP_BALBcJ_T0081937.1 MGP_BALBcJ_G0031736.1 mouse_genomes_project 7 16888039 16907416 + MGP_BALBcJ_P0081937 Rsph6a protein_coding protein_coding MGP_BALBcJ_T0081938.1 MGP_BALBcJ_G0031736.1 mouse_genomes_project 7 16890697 16898835 + Rsph6a protein_coding processed_transcript MGP_BALBcJ_T0100101.1 MGP_BALBcJ_G0038137.1 mouse_genomes_project 7 127405995 127406102 - Gm23445 snRNA snRNA MGP_BALBcJ_T0081715.1 MGP_BALBcJ_G0031663.1 mouse_genomes_project 7 11912281 11939916 - MGP_BALBcJ_P0081715 Sult2a7 protein_coding protein_coding MGP_BALBcJ_T0081716.1 MGP_BALBcJ_G0031663.1 mouse_genomes_project 7 11912358 11938916 - MGP_BALBcJ_P0081716 Sult2a7 protein_coding unknown_likely_coding MGP_BALBcJ_T0082886.1 MGP_BALBcJ_G0031987.1 mouse_genomes_project 7 28552986 28565513 + MGP_BALBcJ_P0082886 Gm5113 protein_coding protein_coding MGP_BALBcJ_T0083353.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34398996 34408307 - MGP_BALBcJ_P0083353 Pdcd5 protein_coding protein_coding MGP_BALBcJ_T0083354.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34399026 34407509 - MGP_BALBcJ_P0083354 Pdcd5 protein_coding protein_coding MGP_BALBcJ_T0083355.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34399028 34400377 - Pdcd5 protein_coding retained_intron MGP_BALBcJ_T0083356.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34399030 34401188 - Pdcd5 protein_coding retained_intron MGP_BALBcJ_T0083357.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34401154 34408290 - Pdcd5 protein_coding retained_intron MGP_BALBcJ_T0083358.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34401519 34408266 - Pdcd5 protein_coding retained_intron MGP_BALBcJ_T0083359.1 MGP_BALBcJ_G0032081.1 mouse_genomes_project 7 34405986 34408252 - Pdcd5 protein_coding retained_intron MGP_BALBcJ_T0015911.1 MGP_BALBcJ_G0014008.1 mouse_genomes_project 7 144365400 144365956 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082798.1 MGP_BALBcJ_G0031965.1 mouse_genomes_project 7 27626501 27654384 - MGP_BALBcJ_P0082798 Spint2 protein_coding protein_coding MGP_BALBcJ_T0082799.1 MGP_BALBcJ_G0031965.1 mouse_genomes_project 7 27626501 27654384 - MGP_BALBcJ_P0082799 Spint2 protein_coding protein_coding MGP_BALBcJ_T0010922.1 MGP_BALBcJ_G0009047.1 mouse_genomes_project 7 144799335 144799420 + Mir3105 miRNA miRNA MGP_BALBcJ_T0081454.1 MGP_BALBcJ_G0031546.1 mouse_genomes_project 7 1778351 1796035 - MGP_BALBcJ_P0081454 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081455.1 MGP_BALBcJ_G0031546.1 mouse_genomes_project 7 1790468 1794803 - protein_coding retained_intron MGP_BALBcJ_T0081456.1 MGP_BALBcJ_G0031546.1 mouse_genomes_project 7 1791457 1796274 - MGP_BALBcJ_P0081456 protein_coding protein_coding MGP_BALBcJ_T0081457.1 MGP_BALBcJ_G0031546.1 mouse_genomes_project 7 1791866 1795808 - MGP_BALBcJ_P0081457 protein_coding protein_coding MGP_BALBcJ_T0081458.1 MGP_BALBcJ_G0031546.1 mouse_genomes_project 7 1794126 1795590 - MGP_BALBcJ_P0081458 protein_coding protein_coding MGP_BALBcJ_T0015680.1 MGP_BALBcJ_G0013777.1 mouse_genomes_project 7 2997897 2998852 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085756.1 MGP_BALBcJ_G0032754.1 mouse_genomes_project 7 106552420 106830518 - MGP_BALBcJ_P0085756 protein_coding protein_coding MGP_BALBcJ_T0081223.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 497008 506579 - MGP_BALBcJ_P0081223 Tfpt protein_coding protein_coding MGP_BALBcJ_T0081224.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 497008 506624 - MGP_BALBcJ_P0081224 Tfpt protein_coding protein_coding MGP_BALBcJ_T0081225.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 497019 505781 - MGP_BALBcJ_P0081225 Tfpt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081226.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 497463 506274 - Tfpt protein_coding processed_transcript MGP_BALBcJ_T0081227.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 497479 506522 - MGP_BALBcJ_P0081227 Tfpt protein_coding protein_coding MGP_BALBcJ_T0081228.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 497658 506554 - MGP_BALBcJ_P0081228 Tfpt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081229.1 MGP_BALBcJ_G0031506.1 mouse_genomes_project 7 501280 506274 - MGP_BALBcJ_P0081229 Tfpt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084619.1 MGP_BALBcJ_G0032392.1 mouse_genomes_project 7 79740308 79801683 + MGP_BALBcJ_P0084619 Zfp710 protein_coding protein_coding MGP_BALBcJ_T0084620.1 MGP_BALBcJ_G0032392.1 mouse_genomes_project 7 79741617 79795290 + MGP_BALBcJ_P0084620 Zfp710 protein_coding protein_coding MGP_BALBcJ_T0084621.1 MGP_BALBcJ_G0032392.1 mouse_genomes_project 7 79795197 79807591 + MGP_BALBcJ_P0084621 Zfp710 protein_coding protein_coding MGP_BALBcJ_T0015739.1 MGP_BALBcJ_G0013836.1 mouse_genomes_project 7 28228558 28228971 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102803.1 MGP_BALBcJ_G0040618.1 mouse_genomes_project 7 86387112 86387809 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015870.1 MGP_BALBcJ_G0013967.1 mouse_genomes_project 7 113721567 113721969 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084886.1 MGP_BALBcJ_G0032446.1 mouse_genomes_project 7 83688552 83846636 - MGP_BALBcJ_P0084886 Cemip protein_coding protein_coding MGP_BALBcJ_T0084887.1 MGP_BALBcJ_G0032446.1 mouse_genomes_project 7 83690819 83700391 - Cemip protein_coding retained_intron MGP_BALBcJ_T0084888.1 MGP_BALBcJ_G0032446.1 mouse_genomes_project 7 83702594 83846635 - Cemip protein_coding retained_intron MGP_BALBcJ_T0084889.1 MGP_BALBcJ_G0032446.1 mouse_genomes_project 7 83706507 83733089 - Cemip protein_coding retained_intron MGP_BALBcJ_T0084890.1 MGP_BALBcJ_G0032446.1 mouse_genomes_project 7 83716787 83846635 - Cemip protein_coding retained_intron MGP_BALBcJ_T0005615.1 MGP_BALBcJ_G0004729.1 mouse_genomes_project 7 79631800 79633599 + 5430400D12Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0086131.1 MGP_BALBcJ_G0032885.1 mouse_genomes_project 7 118836669 118899857 - MGP_BALBcJ_P0086131 Syt17 protein_coding protein_coding MGP_BALBcJ_T0086132.1 MGP_BALBcJ_G0032885.1 mouse_genomes_project 7 118836670 118898844 - Syt17 protein_coding retained_intron MGP_BALBcJ_T0086133.1 MGP_BALBcJ_G0032885.1 mouse_genomes_project 7 118836672 118904920 - MGP_BALBcJ_P0086133 Syt17 protein_coding protein_coding MGP_BALBcJ_T0086134.1 MGP_BALBcJ_G0032885.1 mouse_genomes_project 7 118863965 118904888 - MGP_BALBcJ_P0086134 Syt17 protein_coding protein_coding MGP_BALBcJ_T0086149.1 MGP_BALBcJ_G0032891.1 mouse_genomes_project 7 119174303 119198987 + MGP_BALBcJ_P0086149 Ccp110 protein_coding protein_coding MGP_BALBcJ_T0086150.1 MGP_BALBcJ_G0032891.1 mouse_genomes_project 7 119177173 119198984 + MGP_BALBcJ_P0086150 Ccp110 protein_coding protein_coding MGP_BALBcJ_T0086151.1 MGP_BALBcJ_G0032891.1 mouse_genomes_project 7 119183586 119198979 + Ccp110 protein_coding retained_intron MGP_BALBcJ_T0086152.1 MGP_BALBcJ_G0032891.1 mouse_genomes_project 7 119187933 119198987 + Ccp110 protein_coding retained_intron MGP_BALBcJ_T0086153.1 MGP_BALBcJ_G0032891.1 mouse_genomes_project 7 119192228 119194425 + Ccp110 protein_coding retained_intron MGP_BALBcJ_T0100084.1 MGP_BALBcJ_G0038120.1 mouse_genomes_project 7 104407166 104407266 - Gm24783 snRNA snRNA MGP_BALBcJ_T0086713.1 MGP_BALBcJ_G0032999.1 mouse_genomes_project 7 127466703 127471084 + MGP_BALBcJ_P0086713 Cdipt protein_coding protein_coding MGP_BALBcJ_T0086714.1 MGP_BALBcJ_G0032999.1 mouse_genomes_project 7 127467014 127471078 + MGP_BALBcJ_P0086714 Cdipt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086715.1 MGP_BALBcJ_G0032999.1 mouse_genomes_project 7 127467036 127471080 + MGP_BALBcJ_P0086715 Cdipt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086716.1 MGP_BALBcJ_G0032999.1 mouse_genomes_project 7 127467166 127470230 + MGP_BALBcJ_P0086716 Cdipt protein_coding protein_coding MGP_BALBcJ_T0086717.1 MGP_BALBcJ_G0032999.1 mouse_genomes_project 7 127467308 127470616 + MGP_BALBcJ_P0086717 Cdipt protein_coding protein_coding MGP_BALBcJ_T0086718.1 MGP_BALBcJ_G0032999.1 mouse_genomes_project 7 127468811 127470054 + Cdipt protein_coding retained_intron MGP_BALBcJ_T0082581.1 MGP_BALBcJ_G0031905.1 mouse_genomes_project 7 25941789 25959835 + MGP_BALBcJ_P0082581 Zfp607b protein_coding protein_coding MGP_BALBcJ_T0015708.1 MGP_BALBcJ_G0013805.1 mouse_genomes_project 7 14273421 14273974 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082051.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17461587 17485465 - Relb protein_coding retained_intron MGP_BALBcJ_T0082052.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17461587 17485465 - Relb protein_coding retained_intron MGP_BALBcJ_T0082053.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17461587 17485465 - Relb protein_coding retained_intron MGP_BALBcJ_T0082054.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17461587 17485465 - MGP_BALBcJ_P0082054 Relb protein_coding protein_coding MGP_BALBcJ_T0082055.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17461587 17485465 - MGP_BALBcJ_P0082055 Relb protein_coding protein_coding MGP_BALBcJ_T0082056.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17461593 17485465 - MGP_BALBcJ_P0082056 Relb protein_coding protein_coding MGP_BALBcJ_T0082057.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17472401 17484811 - Relb protein_coding processed_transcript MGP_BALBcJ_T0082058.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17473799 17484500 - Relb protein_coding processed_transcript MGP_BALBcJ_T0082059.1 MGP_BALBcJ_G0031768.1 mouse_genomes_project 7 17473863 17484461 - Relb protein_coding processed_transcript MGP_BALBcJ_T0081858.1 MGP_BALBcJ_G0031703.1 mouse_genomes_project 7 14535624 14539773 + MGP_BALBcJ_P0081858 Pnmal2 protein_coding protein_coding MGP_BALBcJ_T0083493.1 MGP_BALBcJ_G0032118.1 mouse_genomes_project 7 42714581 42731878 - MGP_BALBcJ_P0083493 Iglon5 protein_coding protein_coding MGP_BALBcJ_T0083494.1 MGP_BALBcJ_G0032118.1 mouse_genomes_project 7 42715863 42719911 - MGP_BALBcJ_P0083494 Iglon5 protein_coding protein_coding MGP_BALBcJ_T0100095.1 MGP_BALBcJ_G0038131.1 mouse_genomes_project 7 121497433 121497536 - Gm25924 snRNA snRNA MGP_BALBcJ_T0015735.1 MGP_BALBcJ_G0013832.1 mouse_genomes_project 7 25303328 25303686 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011661.1 MGP_BALBcJ_G0009786.1 mouse_genomes_project 7 23983937 23984044 + Gm23921 misc_RNA misc_RNA MGP_BALBcJ_T0085212.1 MGP_BALBcJ_G0032546.1 mouse_genomes_project 7 99955869 99984225 + MGP_BALBcJ_P0085212 Chrdl2 protein_coding protein_coding MGP_BALBcJ_T0085213.1 MGP_BALBcJ_G0032546.1 mouse_genomes_project 7 99959378 99984227 + MGP_BALBcJ_P0085213 Chrdl2 protein_coding protein_coding MGP_BALBcJ_T0085214.1 MGP_BALBcJ_G0032546.1 mouse_genomes_project 7 99971525 99984225 + MGP_BALBcJ_P0085214 Chrdl2 protein_coding protein_coding MGP_BALBcJ_T0102786.1 MGP_BALBcJ_G0040601.1 mouse_genomes_project 7 85194658 85197202 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083935.1 MGP_BALBcJ_G0032235.1 mouse_genomes_project 7 45113511 45121760 + MGP_BALBcJ_P0083935 Fam83e protein_coding protein_coding MGP_BALBcJ_T0083936.1 MGP_BALBcJ_G0032235.1 mouse_genomes_project 7 45113519 45117159 + Fam83e protein_coding retained_intron MGP_BALBcJ_T0083938.1 MGP_BALBcJ_G0032235.1 mouse_genomes_project 7 45118151 45121757 + Fam83e protein_coding processed_transcript MGP_BALBcJ_T0082689.1 MGP_BALBcJ_G0031941.1 mouse_genomes_project 7 27045537 27045988 - Mrps12 protein_coding processed_transcript MGP_BALBcJ_T0082690.1 MGP_BALBcJ_G0031941.1 mouse_genomes_project 7 27045537 27047742 - MGP_BALBcJ_P0082690 Mrps12 protein_coding protein_coding MGP_BALBcJ_T0082691.1 MGP_BALBcJ_G0031941.1 mouse_genomes_project 7 27045538 27047792 - MGP_BALBcJ_P0082691 Mrps12 protein_coding protein_coding MGP_BALBcJ_T0082692.1 MGP_BALBcJ_G0031941.1 mouse_genomes_project 7 27045812 27046742 - MGP_BALBcJ_P0082692 Mrps12 protein_coding protein_coding MGP_BALBcJ_T0084141.1 MGP_BALBcJ_G0032297.1 mouse_genomes_project 7 51443429 51445120 - MGP_BALBcJ_P0084141 Fancf protein_coding protein_coding MGP_BALBcJ_T0102765.1 MGP_BALBcJ_G0040580.1 mouse_genomes_project 7 47645686 47646650 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082582.1 MGP_BALBcJ_G0031906.1 mouse_genomes_project 7 25986410 26008788 + MGP_BALBcJ_P0082582 Zfp60 protein_coding protein_coding MGP_BALBcJ_T0082583.1 MGP_BALBcJ_G0031906.1 mouse_genomes_project 7 25986432 25997434 + Zfp60 protein_coding retained_intron MGP_BALBcJ_T0082584.1 MGP_BALBcJ_G0031906.1 mouse_genomes_project 7 25986436 26005106 + MGP_BALBcJ_P0082584 Zfp60 protein_coding protein_coding MGP_BALBcJ_T0082585.1 MGP_BALBcJ_G0031906.1 mouse_genomes_project 7 25986453 26003306 + MGP_BALBcJ_P0082585 Zfp60 protein_coding protein_coding MGP_BALBcJ_T0082586.1 MGP_BALBcJ_G0031906.1 mouse_genomes_project 7 25986464 26003629 + MGP_BALBcJ_P0082586 Zfp60 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082587.1 MGP_BALBcJ_G0031906.1 mouse_genomes_project 7 25986532 26005544 + MGP_BALBcJ_P0082587 Zfp60 protein_coding protein_coding MGP_BALBcJ_T0086962.1 MGP_BALBcJ_G0033048.1 mouse_genomes_project 7 128409593 128413169 + Kat8 protein_coding retained_intron MGP_BALBcJ_T0086963.1 MGP_BALBcJ_G0033048.1 mouse_genomes_project 7 128409593 128427525 + MGP_BALBcJ_P0086963 Kat8 protein_coding protein_coding MGP_BALBcJ_T0086964.1 MGP_BALBcJ_G0033048.1 mouse_genomes_project 7 128411233 128418693 + MGP_BALBcJ_P0086964 Kat8 protein_coding protein_coding MGP_BALBcJ_T0086965.1 MGP_BALBcJ_G0033048.1 mouse_genomes_project 7 128417969 128418761 + Kat8 protein_coding retained_intron MGP_BALBcJ_T0015773.1 MGP_BALBcJ_G0013870.1 mouse_genomes_project 7 42627025 42627290 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098643.1 MGP_BALBcJ_G0036697.1 mouse_genomes_project 7 33844667 33844786 + Gm22535 rRNA rRNA MGP_BALBcJ_T0085067.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97388849 97449820 + MGP_BALBcJ_P0085067 Ints4 protein_coding protein_coding MGP_BALBcJ_T0085068.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97388896 97422737 + Ints4 protein_coding retained_intron MGP_BALBcJ_T0085069.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97388906 97404373 + Ints4 protein_coding retained_intron MGP_BALBcJ_T0085070.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97410755 97416369 + MGP_BALBcJ_P0085070 Ints4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085071.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97438600 97443675 + Ints4 protein_coding retained_intron MGP_BALBcJ_T0085072.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97443509 97449688 + Ints4 protein_coding retained_intron MGP_BALBcJ_T0085073.1 MGP_BALBcJ_G0032511.1 mouse_genomes_project 7 97443741 97449821 + Ints4 protein_coding retained_intron MGP_BALBcJ_T0100053.1 MGP_BALBcJ_G0038089.1 mouse_genomes_project 7 16554721 16554828 - Gm24464 snRNA snRNA MGP_BALBcJ_T0102727.1 MGP_BALBcJ_G0040542.1 mouse_genomes_project 7 32205801 32207053 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011657.1 MGP_BALBcJ_G0009782.1 mouse_genomes_project 7 3939161 3939459 - Gm22649 misc_RNA misc_RNA MGP_BALBcJ_T0005280.1 MGP_BALBcJ_G0004481.1 mouse_genomes_project 7 132751452 132752583 + Gm15677 antisense antisense MGP_BALBcJ_T0002240.1 MGP_BALBcJ_G0002152.1 mouse_genomes_project 7 63895157 63898560 - TEC TEC MGP_BALBcJ_T0085998.1 MGP_BALBcJ_G0032862.1 mouse_genomes_project 7 113712973 113766631 - MGP_BALBcJ_P0085998 Btbd10 protein_coding protein_coding MGP_BALBcJ_T0085999.1 MGP_BALBcJ_G0032862.1 mouse_genomes_project 7 113712984 113744622 - MGP_BALBcJ_P0085999 Btbd10 protein_coding protein_coding MGP_BALBcJ_T0086000.1 MGP_BALBcJ_G0032862.1 mouse_genomes_project 7 113712993 113749364 - MGP_BALBcJ_P0086000 Btbd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086001.1 MGP_BALBcJ_G0032862.1 mouse_genomes_project 7 113724338 113728781 - Btbd10 protein_coding retained_intron MGP_BALBcJ_T0086002.1 MGP_BALBcJ_G0032862.1 mouse_genomes_project 7 113765908 113766628 - Btbd10 protein_coding processed_transcript MGP_BALBcJ_T0015741.1 MGP_BALBcJ_G0013838.1 mouse_genomes_project 7 29095921 29096449 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018373.1 MGP_BALBcJ_G0015626.1 mouse_genomes_project 7 118708697 118710395 + 4930583K01Rik processed_transcript processed_transcript MGP_BALBcJ_T0084080.1 MGP_BALBcJ_G0032276.1 mouse_genomes_project 7 46761772 46941784 - MGP_BALBcJ_P0084080 protein_coding protein_coding MGP_BALBcJ_T0084081.1 MGP_BALBcJ_G0032276.1 mouse_genomes_project 7 46761773 46984935 - MGP_BALBcJ_P0084081 protein_coding protein_coding MGP_BALBcJ_T0015801.1 MGP_BALBcJ_G0013898.1 mouse_genomes_project 7 64970615 64970934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085044.1 MGP_BALBcJ_G0032505.1 mouse_genomes_project 7 97205357 97227976 - MGP_BALBcJ_P0085044 Usp35 protein_coding protein_coding MGP_BALBcJ_T0085045.1 MGP_BALBcJ_G0032505.1 mouse_genomes_project 7 97205357 97221919 - MGP_BALBcJ_P0085045 Usp35 protein_coding protein_coding MGP_BALBcJ_T0085046.1 MGP_BALBcJ_G0032505.1 mouse_genomes_project 7 97205383 97211972 - Usp35 protein_coding processed_transcript MGP_BALBcJ_T0085047.1 MGP_BALBcJ_G0032505.1 mouse_genomes_project 7 97208450 97211003 - Usp35 protein_coding retained_intron MGP_BALBcJ_T0085048.1 MGP_BALBcJ_G0032505.1 mouse_genomes_project 7 97208565 97211973 - Usp35 protein_coding processed_transcript MGP_BALBcJ_T0085049.1 MGP_BALBcJ_G0032505.1 mouse_genomes_project 7 97215166 97220348 - Usp35 protein_coding retained_intron MGP_BALBcJ_T0002275.1 MGP_BALBcJ_G0002186.1 mouse_genomes_project 7 79633975 79636204 - TEC TEC MGP_BALBcJ_T0101319.1 MGP_BALBcJ_G0039355.1 mouse_genomes_project 7 44498057 44498141 - Snord33 snoRNA snoRNA MGP_BALBcJ_T0086854.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128071881 128077138 + Phkg2 protein_coding retained_intron MGP_BALBcJ_T0086855.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128071921 128080922 + MGP_BALBcJ_P0086855 Phkg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086856.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128071943 128080922 + MGP_BALBcJ_P0086856 Phkg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086857.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128071945 128077761 + Phkg2 protein_coding retained_intron MGP_BALBcJ_T0086858.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128071945 128081782 + MGP_BALBcJ_P0086858 Phkg2 protein_coding protein_coding MGP_BALBcJ_T0086859.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128072047 128081780 + MGP_BALBcJ_P0086859 Phkg2 protein_coding protein_coding MGP_BALBcJ_T0086860.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128072101 128081780 + MGP_BALBcJ_P0086860 Phkg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086861.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128072160 128080873 + Phkg2 protein_coding retained_intron MGP_BALBcJ_T0086862.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128076491 128081775 + MGP_BALBcJ_P0086862 Phkg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086863.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128077756 128080894 + Phkg2 protein_coding retained_intron MGP_BALBcJ_T0086864.1 MGP_BALBcJ_G0033028.1 mouse_genomes_project 7 128080570 128081161 + Phkg2 protein_coding retained_intron MGP_BALBcJ_T0015885.1 MGP_BALBcJ_G0013982.1 mouse_genomes_project 7 126645006 126645417 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015874.1 MGP_BALBcJ_G0013971.1 mouse_genomes_project 7 121059039 121059890 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087780.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + Tnnt3 protein_coding processed_transcript MGP_BALBcJ_T0087781.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087781 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087782.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087782 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087783.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087783 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087784.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087784 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087785.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087785 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087786.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087786 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087787.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263510 143280843 + MGP_BALBcJ_P0087787 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087788.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263517 143280838 + MGP_BALBcJ_P0087788 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087789.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263517 143280838 + MGP_BALBcJ_P0087789 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087790.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263517 143280838 + MGP_BALBcJ_P0087790 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087791.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263517 143280838 + MGP_BALBcJ_P0087791 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087792.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263538 143280842 + MGP_BALBcJ_P0087792 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087793.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143263546 143280839 + MGP_BALBcJ_P0087793 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087794.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266291 143276203 + MGP_BALBcJ_P0087794 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087795.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266294 143277289 + MGP_BALBcJ_P0087795 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087796.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087796 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087797.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087797 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087798.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087798 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087799.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087799 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087800.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087800 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087801.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087801 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087802.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087802 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087803.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143266312 143280666 + MGP_BALBcJ_P0087803 Tnnt3 protein_coding protein_coding MGP_BALBcJ_T0087804.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143268687 143277252 + Tnnt3 protein_coding retained_intron MGP_BALBcJ_T0087805.1 MGP_BALBcJ_G0033243.1 mouse_genomes_project 7 143278965 143280844 + Tnnt3 protein_coding retained_intron MGP_BALBcJ_T0082696.1 MGP_BALBcJ_G0031944.1 mouse_genomes_project 7 27064972 27073333 - MGP_BALBcJ_P0082696 Nfkbib protein_coding protein_coding MGP_BALBcJ_T0082697.1 MGP_BALBcJ_G0031944.1 mouse_genomes_project 7 27065753 27073207 - MGP_BALBcJ_P0082697 Nfkbib protein_coding protein_coding MGP_BALBcJ_T0082698.1 MGP_BALBcJ_G0031944.1 mouse_genomes_project 7 27068494 27074205 - MGP_BALBcJ_P0082698 Nfkbib protein_coding protein_coding MGP_BALBcJ_T0087292.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134893430 134990311 - MGP_BALBcJ_P0087292 D7Ertd443e protein_coding protein_coding MGP_BALBcJ_T0087293.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134893944 134996684 - MGP_BALBcJ_P0087293 D7Ertd443e protein_coding protein_coding MGP_BALBcJ_T0087294.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134893957 134973545 - MGP_BALBcJ_P0087294 D7Ertd443e protein_coding protein_coding MGP_BALBcJ_T0087295.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134894496 134896523 - D7Ertd443e protein_coding retained_intron MGP_BALBcJ_T0087296.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134894496 134980480 - MGP_BALBcJ_P0087296 D7Ertd443e protein_coding protein_coding MGP_BALBcJ_T0087297.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134981116 135008576 - MGP_BALBcJ_P0087297 D7Ertd443e protein_coding protein_coding MGP_BALBcJ_T0087298.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134981237 135008570 - MGP_BALBcJ_P0087298 D7Ertd443e protein_coding protein_coding MGP_BALBcJ_T0087299.1 MGP_BALBcJ_G0033111.1 mouse_genomes_project 7 134986287 135017406 - D7Ertd443e protein_coding processed_transcript MGP_BALBcJ_T0086040.1 MGP_BALBcJ_G0032873.1 mouse_genomes_project 7 115127072 115131790 + MGP_BALBcJ_P0086040 Calcb protein_coding protein_coding MGP_BALBcJ_T0086041.1 MGP_BALBcJ_G0032873.1 mouse_genomes_project 7 115127104 115131488 + MGP_BALBcJ_P0086041 Calcb protein_coding protein_coding MGP_BALBcJ_T0086042.1 MGP_BALBcJ_G0032873.1 mouse_genomes_project 7 115127939 115128568 + MGP_BALBcJ_P0086042 Calcb protein_coding protein_coding MGP_BALBcJ_T0081588.1 MGP_BALBcJ_G0031615.1 mouse_genomes_project 7 9201695 9202613 + MGP_BALBcJ_P0081588 Vmn1r75 protein_coding protein_coding MGP_BALBcJ_T0082243.1 MGP_BALBcJ_G0031831.1 mouse_genomes_project 7 22905392 22912438 - MGP_BALBcJ_P0082243 Lypd4 protein_coding protein_coding MGP_BALBcJ_T0082244.1 MGP_BALBcJ_G0031831.1 mouse_genomes_project 7 22906097 22912229 - MGP_BALBcJ_P0082244 Lypd4 protein_coding protein_coding MGP_BALBcJ_T0087582.1 MGP_BALBcJ_G0033204.1 mouse_genomes_project 7 142014484 142015287 - MGP_BALBcJ_P0087582 Sct protein_coding protein_coding MGP_BALBcJ_T0087583.1 MGP_BALBcJ_G0033204.1 mouse_genomes_project 7 142014507 142015285 - MGP_BALBcJ_P0087583 Sct protein_coding protein_coding MGP_BALBcJ_T0084906.1 MGP_BALBcJ_G0032457.1 mouse_genomes_project 7 86092607 86093689 - MGP_BALBcJ_P0084906 Olfr310 protein_coding protein_coding MGP_BALBcJ_T0100071.1 MGP_BALBcJ_G0038107.1 mouse_genomes_project 7 65693181 65693282 - Gm23042 snRNA snRNA MGP_BALBcJ_T0082739.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27202672 27272220 - MGP_BALBcJ_P0082739 Actn4 protein_coding protein_coding MGP_BALBcJ_T0082740.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27202673 27272063 - MGP_BALBcJ_P0082740 Actn4 protein_coding unknown_likely_coding MGP_BALBcJ_T0082741.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27203077 27216814 - Actn4 protein_coding processed_transcript MGP_BALBcJ_T0082742.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27203656 27204277 - Actn4 protein_coding retained_intron MGP_BALBcJ_T0082743.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27205066 27206456 - Actn4 protein_coding retained_intron MGP_BALBcJ_T0082744.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27208044 27272103 - MGP_BALBcJ_P0082744 Actn4 protein_coding protein_coding MGP_BALBcJ_T0082745.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27211339 27217115 - Actn4 protein_coding processed_transcript MGP_BALBcJ_T0082746.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27216442 27228654 - MGP_BALBcJ_P0082746 Actn4 protein_coding protein_coding MGP_BALBcJ_T0082747.1 MGP_BALBcJ_G0031952.1 mouse_genomes_project 7 27222810 27259343 - MGP_BALBcJ_P0082747 Actn4 protein_coding protein_coding MGP_BALBcJ_T0008985.1 MGP_BALBcJ_G0007235.1 mouse_genomes_project 7 121734726 121773206 + Gm45079 lincRNA lincRNA MGP_BALBcJ_T0087322.1 MGP_BALBcJ_G0033125.1 mouse_genomes_project 7 139529483 139540370 - MGP_BALBcJ_P0087322 Mapk1ip1 protein_coding protein_coding MGP_BALBcJ_T0087323.1 MGP_BALBcJ_G0033125.1 mouse_genomes_project 7 139529493 139540357 - MGP_BALBcJ_P0087323 Mapk1ip1 protein_coding protein_coding MGP_BALBcJ_T0087324.1 MGP_BALBcJ_G0033125.1 mouse_genomes_project 7 139529538 139540354 - MGP_BALBcJ_P0087324 Mapk1ip1 protein_coding protein_coding MGP_BALBcJ_T0086529.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127049564 127063967 - MGP_BALBcJ_P0086529 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086530.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127049757 127061397 - MGP_BALBcJ_P0086530 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086531.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127049757 127062430 - MGP_BALBcJ_P0086531 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086532.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127050443 127061340 - MGP_BALBcJ_P0086532 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086533.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127050447 127053243 - Cln3 protein_coding processed_transcript MGP_BALBcJ_T0086534.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127050465 127051086 - Cln3 protein_coding processed_transcript MGP_BALBcJ_T0086535.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127050479 127056011 - Cln3 protein_coding retained_intron MGP_BALBcJ_T0086536.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127056506 127062457 - Cln3 protein_coding retained_intron MGP_BALBcJ_T0086537.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127057358 127061376 - Cln3 protein_coding processed_transcript MGP_BALBcJ_T0086538.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127057394 127061512 - MGP_BALBcJ_P0086538 Cln3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086539.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127057410 127062370 - MGP_BALBcJ_P0086539 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086540.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127057556 127061673 - MGP_BALBcJ_P0086540 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086541.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127058411 127061264 - Cln3 protein_coding retained_intron MGP_BALBcJ_T0086542.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127058972 127061466 - Cln3 protein_coding retained_intron MGP_BALBcJ_T0086543.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127059654 127061492 - Cln3 protein_coding processed_transcript MGP_BALBcJ_T0086544.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127059799 127061716 - MGP_BALBcJ_P0086544 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086545.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127059802 127062728 - MGP_BALBcJ_P0086545 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086546.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127059856 127061704 - MGP_BALBcJ_P0086546 Cln3 protein_coding protein_coding MGP_BALBcJ_T0086547.1 MGP_BALBcJ_G0032974.1 mouse_genomes_project 7 127061471 127062936 - Cln3 protein_coding processed_transcript MGP_BALBcJ_T0102709.1 MGP_BALBcJ_G0040524.1 mouse_genomes_project 7 12865897 12866184 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081589.1 MGP_BALBcJ_G0031616.1 mouse_genomes_project 7 9255469 9256444 - MGP_BALBcJ_P0081589 Vmn1r76 protein_coding protein_coding MGP_BALBcJ_T0085159.1 MGP_BALBcJ_G0032527.1 mouse_genomes_project 7 98629056 98643995 + MGP_BALBcJ_P0085159 Prkrir protein_coding protein_coding MGP_BALBcJ_T0085160.1 MGP_BALBcJ_G0032527.1 mouse_genomes_project 7 98629056 98641300 + MGP_BALBcJ_P0085160 Prkrir protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085161.1 MGP_BALBcJ_G0032527.1 mouse_genomes_project 7 98629281 98641046 + MGP_BALBcJ_P0085161 Prkrir protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085162.1 MGP_BALBcJ_G0032527.1 mouse_genomes_project 7 98635809 98641190 + Prkrir protein_coding processed_transcript MGP_BALBcJ_T0086261.1 MGP_BALBcJ_G0032920.1 mouse_genomes_project 7 121140402 121198908 + MGP_BALBcJ_P0086261 BC030336 protein_coding protein_coding MGP_BALBcJ_T0085411.1 MGP_BALBcJ_G0032582.1 mouse_genomes_project 7 102010361 102057473 + MGP_BALBcJ_P0085411 Numa1 protein_coding protein_coding MGP_BALBcJ_T0085412.1 MGP_BALBcJ_G0032582.1 mouse_genomes_project 7 102043492 102057469 + MGP_BALBcJ_P0085412 Numa1 protein_coding protein_coding MGP_BALBcJ_T0005222.1 MGP_BALBcJ_G0004440.1 mouse_genomes_project 7 82494243 82506509 - 4933406J10Rik antisense antisense MGP_BALBcJ_T0002262.1 MGP_BALBcJ_G0002173.1 mouse_genomes_project 7 76394486 76396068 - TEC TEC MGP_BALBcJ_T0086027.1 MGP_BALBcJ_G0032871.1 mouse_genomes_project 7 114960943 114973726 - MGP_BALBcJ_P0086027 Cyp2r1 protein_coding protein_coding MGP_BALBcJ_T0086028.1 MGP_BALBcJ_G0032871.1 mouse_genomes_project 7 114960999 114973724 - MGP_BALBcJ_P0086028 Cyp2r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086029.1 MGP_BALBcJ_G0032871.1 mouse_genomes_project 7 114961010 114973716 - MGP_BALBcJ_P0086029 Cyp2r1 protein_coding protein_coding MGP_BALBcJ_T0086030.1 MGP_BALBcJ_G0032871.1 mouse_genomes_project 7 114961024 114965511 - Cyp2r1 protein_coding processed_transcript MGP_BALBcJ_T0086031.1 MGP_BALBcJ_G0032871.1 mouse_genomes_project 7 114961024 114965507 - MGP_BALBcJ_P0086031 Cyp2r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086032.1 MGP_BALBcJ_G0032871.1 mouse_genomes_project 7 114961026 114973716 - MGP_BALBcJ_P0086032 Cyp2r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015737.1 MGP_BALBcJ_G0013834.1 mouse_genomes_project 7 25509616 25510241 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081708.1 MGP_BALBcJ_G0031659.1 mouse_genomes_project 7 11494777 11551540 - MGP_BALBcJ_P0081708 Sult2a3 protein_coding protein_coding MGP_BALBcJ_T0081332.1 MGP_BALBcJ_G0031522.1 mouse_genomes_project 7 1127117 1140746 - MGP_BALBcJ_P0081332 1700027J19Rik protein_coding protein_coding MGP_BALBcJ_T0081333.1 MGP_BALBcJ_G0031522.1 mouse_genomes_project 7 1127408 1140425 - MGP_BALBcJ_P0081333 1700027J19Rik protein_coding protein_coding MGP_BALBcJ_T0081334.1 MGP_BALBcJ_G0031522.1 mouse_genomes_project 7 1127633 1140328 - MGP_BALBcJ_P0081334 1700027J19Rik protein_coding protein_coding MGP_BALBcJ_T0002279.1 MGP_BALBcJ_G0002190.1 mouse_genomes_project 7 80327764 80328314 - TEC TEC MGP_BALBcJ_T0084918.1 MGP_BALBcJ_G0032468.1 mouse_genomes_project 7 86478961 86479969 - MGP_BALBcJ_P0084918 Olfr294 protein_coding protein_coding MGP_BALBcJ_T0082140.1 MGP_BALBcJ_G0031801.1 mouse_genomes_project 7 22111441 22113371 + Zfp235 protein_coding retained_intron MGP_BALBcJ_T0082141.1 MGP_BALBcJ_G0031801.1 mouse_genomes_project 7 22111446 22114179 + Zfp235 protein_coding processed_transcript MGP_BALBcJ_T0082142.1 MGP_BALBcJ_G0031801.1 mouse_genomes_project 7 22111468 22118227 + MGP_BALBcJ_P0082142 Zfp235 protein_coding protein_coding MGP_BALBcJ_T0082143.1 MGP_BALBcJ_G0031801.1 mouse_genomes_project 7 22111479 22112741 + Zfp235 protein_coding retained_intron MGP_BALBcJ_T0082144.1 MGP_BALBcJ_G0031801.1 mouse_genomes_project 7 22111500 22114183 + Zfp235 protein_coding processed_transcript MGP_BALBcJ_T0082145.1 MGP_BALBcJ_G0031801.1 mouse_genomes_project 7 22111514 22122168 + MGP_BALBcJ_P0082145 Zfp235 protein_coding protein_coding MGP_BALBcJ_T0081287.1 MGP_BALBcJ_G0031514.1 mouse_genomes_project 7 635593 656505 - protein_coding retained_intron MGP_BALBcJ_T0081288.1 MGP_BALBcJ_G0031514.1 mouse_genomes_project 7 635593 656503 - MGP_BALBcJ_P0081288 protein_coding protein_coding MGP_BALBcJ_T0081290.1 MGP_BALBcJ_G0031514.1 mouse_genomes_project 7 635931 656487 - protein_coding retained_intron MGP_BALBcJ_T0010870.1 MGP_BALBcJ_G0008995.1 mouse_genomes_project 7 61398387 61398482 - Mir344 miRNA miRNA MGP_BALBcJ_T0086206.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120229743 120255559 - MGP_BALBcJ_P0086206 Eri2 protein_coding protein_coding MGP_BALBcJ_T0086207.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120233010 120255559 - MGP_BALBcJ_P0086207 Eri2 protein_coding protein_coding MGP_BALBcJ_T0086211.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120243564 120255567 - Eri2 protein_coding retained_intron MGP_BALBcJ_T0086212.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120244812 120255574 - MGP_BALBcJ_P0086212 Eri2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086213.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120244829 120255551 - MGP_BALBcJ_P0086213 Eri2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086214.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120245881 120255650 - MGP_BALBcJ_P0086214 Eri2 protein_coding protein_coding MGP_BALBcJ_T0086215.1 MGP_BALBcJ_G0032906.1 mouse_genomes_project 7 120247479 120248938 - Eri2 protein_coding retained_intron MGP_BALBcJ_T0083926.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45106174 45113134 + MGP_BALBcJ_P0083926 Rpl18 protein_coding protein_coding MGP_BALBcJ_T0083927.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45108789 45113135 + MGP_BALBcJ_P0083927 Rpl18 protein_coding protein_coding MGP_BALBcJ_T0083928.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45108875 45113128 + MGP_BALBcJ_P0083928 Rpl18 protein_coding protein_coding MGP_BALBcJ_T0083929.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45109870 45111275 + Rpl18 protein_coding retained_intron MGP_BALBcJ_T0083930.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45109927 45111507 + MGP_BALBcJ_P0083930 Rpl18 protein_coding protein_coding MGP_BALBcJ_T0083931.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45109980 45113085 + Rpl18 protein_coding retained_intron MGP_BALBcJ_T0083932.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45110745 45113127 + MGP_BALBcJ_P0083932 Rpl18 protein_coding protein_coding MGP_BALBcJ_T0083933.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45110770 45113130 + MGP_BALBcJ_P0083933 Rpl18 protein_coding protein_coding MGP_BALBcJ_T0083934.1 MGP_BALBcJ_G0032234.1 mouse_genomes_project 7 45111304 45113130 + Rpl18 protein_coding retained_intron MGP_BALBcJ_T0085996.1 MGP_BALBcJ_G0032860.1 mouse_genomes_project 7 113336851 113340345 + MGP_BALBcJ_P0085996 Rassf10 protein_coding protein_coding MGP_BALBcJ_T0002242.1 MGP_BALBcJ_G0002154.1 mouse_genomes_project 7 64110647 64111119 + TEC TEC MGP_BALBcJ_T0084025.1 MGP_BALBcJ_G0032258.1 mouse_genomes_project 7 46107166 46131434 - MGP_BALBcJ_P0084025 Saal1 protein_coding protein_coding MGP_BALBcJ_T0084026.1 MGP_BALBcJ_G0032258.1 mouse_genomes_project 7 46110327 46129671 - Saal1 protein_coding retained_intron MGP_BALBcJ_T0084027.1 MGP_BALBcJ_G0032258.1 mouse_genomes_project 7 46110362 46131395 - Saal1 protein_coding retained_intron MGP_BALBcJ_T0084028.1 MGP_BALBcJ_G0032258.1 mouse_genomes_project 7 46110364 46110956 - Saal1 protein_coding processed_transcript MGP_BALBcJ_T0084029.1 MGP_BALBcJ_G0032258.1 mouse_genomes_project 7 46112239 46131412 - Saal1 protein_coding retained_intron MGP_BALBcJ_T0084030.1 MGP_BALBcJ_G0032258.1 mouse_genomes_project 7 46112661 46131415 - Saal1 protein_coding retained_intron MGP_BALBcJ_T0085571.1 MGP_BALBcJ_G0032687.1 mouse_genomes_project 7 104269308 104271223 - MGP_BALBcJ_P0085571 4931431F19Rik protein_coding protein_coding MGP_BALBcJ_T0087614.1 MGP_BALBcJ_G0033211.1 mouse_genomes_project 7 142165541 142168521 - MGP_BALBcJ_P0087614 Cend1 protein_coding protein_coding MGP_BALBcJ_T0087615.1 MGP_BALBcJ_G0033211.1 mouse_genomes_project 7 142165541 142168587 - MGP_BALBcJ_P0087615 Cend1 protein_coding protein_coding MGP_BALBcJ_T0087616.1 MGP_BALBcJ_G0033211.1 mouse_genomes_project 7 142165546 142168514 - MGP_BALBcJ_P0087616 Cend1 protein_coding protein_coding MGP_BALBcJ_T0087617.1 MGP_BALBcJ_G0033211.1 mouse_genomes_project 7 142165546 142168447 - MGP_BALBcJ_P0087617 Cend1 protein_coding protein_coding MGP_BALBcJ_T0008856.1 MGP_BALBcJ_G0007151.1 mouse_genomes_project 7 60602831 60787244 - lincRNA lincRNA MGP_BALBcJ_T0082738.1 MGP_BALBcJ_G0031951.1 mouse_genomes_project 7 27191365 27203010 + MGP_BALBcJ_P0082738 Capn12 protein_coding protein_coding MGP_BALBcJ_T0083400.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36989835 37003984 + MGP_BALBcJ_P0083400 protein_coding protein_coding MGP_BALBcJ_T0083401.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36989858 36990518 + protein_coding processed_transcript MGP_BALBcJ_T0083402.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36989879 37003010 + MGP_BALBcJ_P0083402 protein_coding protein_coding MGP_BALBcJ_T0083403.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36990271 37003984 + MGP_BALBcJ_P0083403 protein_coding protein_coding MGP_BALBcJ_T0083404.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36990466 36995550 + MGP_BALBcJ_P0083404 protein_coding protein_coding MGP_BALBcJ_T0083405.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36990516 37001392 + MGP_BALBcJ_P0083405 protein_coding protein_coding MGP_BALBcJ_T0083406.1 MGP_BALBcJ_G0032088.1 mouse_genomes_project 7 36992882 37001684 + MGP_BALBcJ_P0083406 protein_coding protein_coding MGP_BALBcJ_T0085565.1 MGP_BALBcJ_G0032681.1 mouse_genomes_project 7 104191452 104192391 + MGP_BALBcJ_P0085565 Olfr641 protein_coding protein_coding MGP_BALBcJ_T0082988.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956258 28958312 + U2af1l4 protein_coding processed_transcript MGP_BALBcJ_T0082989.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956264 28958083 + U2af1l4 protein_coding processed_transcript MGP_BALBcJ_T0082990.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956276 28957439 + MGP_BALBcJ_P0082990 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082991.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956278 28958323 + MGP_BALBcJ_P0082991 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0082992.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956282 28958320 + MGP_BALBcJ_P0082992 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0082993.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956283 28957565 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0082994.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956283 28958309 + MGP_BALBcJ_P0082994 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0082995.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956286 28957569 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0082996.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956287 28957566 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0082997.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956293 28958118 + MGP_BALBcJ_P0082997 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082998.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956295 28957756 + MGP_BALBcJ_P0082998 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082999.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956296 28958122 + MGP_BALBcJ_P0082999 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083000.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956297 28957017 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083001.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956299 28958202 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083002.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956301 28960910 + MGP_BALBcJ_P0083002 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083003.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956301 28957696 + MGP_BALBcJ_P0083003 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083004.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956303 28957459 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083005.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956305 28958322 + MGP_BALBcJ_P0083005 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0083006.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956306 28957016 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083007.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956307 28958319 + U2af1l4 protein_coding processed_transcript MGP_BALBcJ_T0083008.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956307 28960912 + MGP_BALBcJ_P0083008 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083009.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956312 28960907 + MGP_BALBcJ_P0083009 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083010.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956313 28958137 + MGP_BALBcJ_P0083010 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0083011.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956313 28958137 + MGP_BALBcJ_P0083011 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0083012.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956313 28958137 + MGP_BALBcJ_P0083012 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083013.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956313 28958137 + MGP_BALBcJ_P0083013 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0083014.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956315 28958317 + U2af1l4 protein_coding processed_transcript MGP_BALBcJ_T0083015.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956315 28957506 + MGP_BALBcJ_P0083015 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0083016.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956316 28960351 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083017.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956317 28957434 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083018.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956324 28958130 + U2af1l4 protein_coding processed_transcript MGP_BALBcJ_T0083019.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956335 28958322 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083020.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956350 28957313 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083021.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956352 28958137 + MGP_BALBcJ_P0083021 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083022.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956354 28958137 + MGP_BALBcJ_P0083022 U2af1l4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083023.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956783 28957565 + U2af1l4 protein_coding retained_intron MGP_BALBcJ_T0083024.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956828 28957236 + U2af1l4 protein_coding processed_transcript MGP_BALBcJ_T0083025.1 MGP_BALBcJ_G0032013.1 mouse_genomes_project 7 28956836 28958137 + MGP_BALBcJ_P0083025 U2af1l4 protein_coding protein_coding MGP_BALBcJ_T0015892.1 MGP_BALBcJ_G0013989.1 mouse_genomes_project 7 127792674 127793016 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002267.1 MGP_BALBcJ_G0002178.1 mouse_genomes_project 7 78984899 78988410 + TEC TEC MGP_BALBcJ_T0005161.1 MGP_BALBcJ_G0004397.1 mouse_genomes_project 7 29115740 29138379 + Tmem147os antisense antisense MGP_BALBcJ_T0005162.1 MGP_BALBcJ_G0004397.1 mouse_genomes_project 7 29118735 29130963 + Tmem147os antisense antisense MGP_BALBcJ_T0085866.1 MGP_BALBcJ_G0032832.1 mouse_genomes_project 7 110047583 110056083 + MGP_BALBcJ_P0085866 Akip1 protein_coding protein_coding MGP_BALBcJ_T0085867.1 MGP_BALBcJ_G0032832.1 mouse_genomes_project 7 110047645 110052867 + MGP_BALBcJ_P0085867 Akip1 protein_coding protein_coding MGP_BALBcJ_T0085868.1 MGP_BALBcJ_G0032832.1 mouse_genomes_project 7 110052726 110055862 + Akip1 protein_coding processed_transcript MGP_BALBcJ_T0015903.1 MGP_BALBcJ_G0014000.1 mouse_genomes_project 7 134368512 134370171 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005124.1 MGP_BALBcJ_G0004371.1 mouse_genomes_project 7 4050118 4074029 - Zim3 antisense antisense MGP_BALBcJ_T0005125.1 MGP_BALBcJ_G0004371.1 mouse_genomes_project 7 4057816 4073062 - Zim3 antisense antisense MGP_BALBcJ_T0005126.1 MGP_BALBcJ_G0004371.1 mouse_genomes_project 7 4073669 4074786 - Zim3 antisense antisense MGP_BALBcJ_T0010866.1 MGP_BALBcJ_G0008991.1 mouse_genomes_project 7 61241973 61242051 - Mir344h-1 miRNA miRNA MGP_BALBcJ_T0082188.1 MGP_BALBcJ_G0031813.1 mouse_genomes_project 7 22441030 22461491 - MGP_BALBcJ_P0082188 Irgc1 protein_coding protein_coding MGP_BALBcJ_T0082189.1 MGP_BALBcJ_G0031813.1 mouse_genomes_project 7 22441030 22444641 - MGP_BALBcJ_P0082189 Irgc1 protein_coding protein_coding MGP_BALBcJ_T0082190.1 MGP_BALBcJ_G0031813.1 mouse_genomes_project 7 22442253 22467811 - MGP_BALBcJ_P0082190 Irgc1 protein_coding protein_coding MGP_BALBcJ_T0082191.1 MGP_BALBcJ_G0031813.1 mouse_genomes_project 7 22466099 22467937 - Irgc1 protein_coding processed_transcript MGP_BALBcJ_T0082192.1 MGP_BALBcJ_G0031813.1 mouse_genomes_project 7 22466504 22467927 - Irgc1 protein_coding processed_transcript MGP_BALBcJ_T0087737.1 MGP_BALBcJ_G0033234.1 mouse_genomes_project 7 142992622 142993299 - MGP_BALBcJ_P0087737 Gm4559 protein_coding protein_coding MGP_BALBcJ_T0008803.1 MGP_BALBcJ_G0007108.1 mouse_genomes_project 7 28225981 28231971 + Gm26554 lincRNA lincRNA MGP_BALBcJ_T0087030.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128775520 128776581 + Slc5a2 protein_coding retained_intron MGP_BALBcJ_T0087031.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128775539 128782156 + MGP_BALBcJ_P0087031 Slc5a2 protein_coding protein_coding MGP_BALBcJ_T0087032.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128775541 128781946 + MGP_BALBcJ_P0087032 Slc5a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087033.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128775546 128779003 + MGP_BALBcJ_P0087033 Slc5a2 protein_coding protein_coding MGP_BALBcJ_T0087034.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128775558 128779007 + MGP_BALBcJ_P0087034 Slc5a2 protein_coding protein_coding MGP_BALBcJ_T0087035.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128776163 128779790 + MGP_BALBcJ_P0087035 Slc5a2 protein_coding protein_coding MGP_BALBcJ_T0087036.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128776206 128777342 + MGP_BALBcJ_P0087036 Slc5a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087037.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128776233 128776638 + Slc5a2 protein_coding retained_intron MGP_BALBcJ_T0087038.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128776821 128778856 + Slc5a2 protein_coding retained_intron MGP_BALBcJ_T0087039.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128777254 128779713 + MGP_BALBcJ_P0087039 Slc5a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087040.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128778816 128781913 + MGP_BALBcJ_P0087040 Slc5a2 protein_coding protein_coding MGP_BALBcJ_T0087041.1 MGP_BALBcJ_G0033063.1 mouse_genomes_project 7 128780299 128781913 + MGP_BALBcJ_P0087041 Slc5a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085779.1 MGP_BALBcJ_G0032776.1 mouse_genomes_project 7 107415880 107416828 + MGP_BALBcJ_P0085779 Olfr17 protein_coding protein_coding MGP_BALBcJ_T0082575.1 MGP_BALBcJ_G0031903.1 mouse_genomes_project 7 25901733 25905153 + MGP_BALBcJ_P0082575 Ttc9b protein_coding protein_coding MGP_BALBcJ_T0101971.1 MGP_BALBcJ_G0039824.1 mouse_genomes_project 7 32205626 32235171 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101972.1 MGP_BALBcJ_G0039824.1 mouse_genomes_project 7 32205792 32207061 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0102813.1 MGP_BALBcJ_G0040628.1 mouse_genomes_project 7 103769917 103867487 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083636.1 MGP_BALBcJ_G0032157.1 mouse_genomes_project 7 43854116 43877870 - MGP_BALBcJ_P0083636 Mybpc2 protein_coding protein_coding MGP_BALBcJ_T0083637.1 MGP_BALBcJ_G0032157.1 mouse_genomes_project 7 43854249 43883163 - MGP_BALBcJ_P0083637 Mybpc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0086799.1 MGP_BALBcJ_G0033017.1 mouse_genomes_project 7 127755755 127759506 - MGP_BALBcJ_P0086799 Dctpp1 protein_coding protein_coding MGP_BALBcJ_T0082454.1 MGP_BALBcJ_G0031878.1 mouse_genomes_project 7 25228409 25237400 + Cyp2a22 protein_coding retained_intron MGP_BALBcJ_T0082455.1 MGP_BALBcJ_G0031878.1 mouse_genomes_project 7 25228413 25236861 + MGP_BALBcJ_P0082455 Cyp2a22 protein_coding protein_coding MGP_BALBcJ_T0084137.1 MGP_BALBcJ_G0032294.1 mouse_genomes_project 7 50158066 50159407 + MGP_BALBcJ_P0084137 4933405O20Rik protein_coding protein_coding MGP_BALBcJ_T0010862.1 MGP_BALBcJ_G0008987.1 mouse_genomes_project 7 61199979 61200048 - Gm22466 miRNA miRNA MGP_BALBcJ_T0015751.1 MGP_BALBcJ_G0013848.1 mouse_genomes_project 7 32718381 32718524 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081624.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10279649 10284541 + MGP_BALBcJ_P0081624 Rps5 protein_coding protein_coding MGP_BALBcJ_T0081625.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10279649 10284540 + MGP_BALBcJ_P0081625 Rps5 protein_coding protein_coding MGP_BALBcJ_T0081626.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10279677 10284349 + MGP_BALBcJ_P0081626 Rps5 protein_coding protein_coding MGP_BALBcJ_T0081627.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10279690 10284075 + Rps5 protein_coding retained_intron MGP_BALBcJ_T0081628.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10279695 10280724 + Rps5 protein_coding retained_intron MGP_BALBcJ_T0081629.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10279796 10284349 + MGP_BALBcJ_P0081629 Rps5 protein_coding protein_coding MGP_BALBcJ_T0081630.1 MGP_BALBcJ_G0031634.1 mouse_genomes_project 7 10283892 10284539 + Rps5 protein_coding retained_intron MGP_BALBcJ_T0005137.1 MGP_BALBcJ_G0004377.1 mouse_genomes_project 7 17570862 17578105 + Gm20512 antisense antisense MGP_BALBcJ_T0082222.1 MGP_BALBcJ_G0031822.1 mouse_genomes_project 7 22629284 22648167 + MGP_BALBcJ_P0082222 Phldb3 protein_coding protein_coding MGP_BALBcJ_T0082223.1 MGP_BALBcJ_G0031822.1 mouse_genomes_project 7 22629849 22648158 + MGP_BALBcJ_P0082223 Phldb3 protein_coding protein_coding MGP_BALBcJ_T0082224.1 MGP_BALBcJ_G0031822.1 mouse_genomes_project 7 22637772 22645420 + Phldb3 protein_coding retained_intron MGP_BALBcJ_T0082225.1 MGP_BALBcJ_G0031822.1 mouse_genomes_project 7 22638174 22641063 + Phldb3 protein_coding processed_transcript MGP_BALBcJ_T0081577.1 MGP_BALBcJ_G0031608.1 mouse_genomes_project 7 7810545 7812277 - MGP_BALBcJ_P0081577 Vmn1r69 protein_coding protein_coding MGP_BALBcJ_T0081578.1 MGP_BALBcJ_G0031608.1 mouse_genomes_project 7 7811478 7848987 - MGP_BALBcJ_P0081578 Vmn1r69 protein_coding protein_coding MGP_BALBcJ_T0081579.1 MGP_BALBcJ_G0031608.1 mouse_genomes_project 7 7811478 7848987 - MGP_BALBcJ_P0081579 Vmn1r69 protein_coding protein_coding MGP_BALBcJ_T0083388.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36761058 36824358 - MGP_BALBcJ_P0083388 Uri1 protein_coding protein_coding MGP_BALBcJ_T0083389.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36761059 36771038 - Uri1 protein_coding processed_transcript MGP_BALBcJ_T0083390.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36761708 36824382 - MGP_BALBcJ_P0083390 Uri1 protein_coding protein_coding MGP_BALBcJ_T0083391.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36762367 36763595 - MGP_BALBcJ_P0083391 Uri1 protein_coding protein_coding MGP_BALBcJ_T0083392.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36762430 36828385 - MGP_BALBcJ_P0083392 Uri1 protein_coding protein_coding MGP_BALBcJ_T0083393.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36766259 36766789 - Uri1 protein_coding processed_transcript MGP_BALBcJ_T0083394.1 MGP_BALBcJ_G0032086.1 mouse_genomes_project 7 36771014 36824338 - MGP_BALBcJ_P0083394 Uri1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005201.1 MGP_BALBcJ_G0004425.1 mouse_genomes_project 7 71741186 71743883 + Gm45107 antisense antisense MGP_BALBcJ_T0082117.1 MGP_BALBcJ_G0031787.1 mouse_genomes_project 7 21247113 21254033 + protein_coding processed_transcript MGP_BALBcJ_T0085778.1 MGP_BALBcJ_G0032775.1 mouse_genomes_project 7 107403999 107404953 + MGP_BALBcJ_P0085778 Olfr714 protein_coding protein_coding MGP_BALBcJ_T0084079.1 MGP_BALBcJ_G0032275.1 mouse_genomes_project 7 46761768 46941755 - MGP_BALBcJ_P0084079 protein_coding protein_coding MGP_BALBcJ_T0087872.1 MGP_BALBcJ_G0033255.1 mouse_genomes_project 7 144226323 144229024 - MGP_BALBcJ_P0087872 Cdkn1c protein_coding protein_coding MGP_BALBcJ_T0087873.1 MGP_BALBcJ_G0033255.1 mouse_genomes_project 7 144226323 144229024 - MGP_BALBcJ_P0087873 Cdkn1c protein_coding protein_coding MGP_BALBcJ_T0082478.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25424245 25426255 - Snrpa protein_coding retained_intron MGP_BALBcJ_T0082479.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25424247 25433000 - MGP_BALBcJ_P0082479 Snrpa protein_coding protein_coding MGP_BALBcJ_T0082480.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25424247 25433485 - MGP_BALBcJ_P0082480 Snrpa protein_coding protein_coding MGP_BALBcJ_T0082481.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25424247 25433511 - MGP_BALBcJ_P0082481 Snrpa protein_coding protein_coding MGP_BALBcJ_T0082482.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25424567 25433000 - MGP_BALBcJ_P0082482 Snrpa protein_coding protein_coding MGP_BALBcJ_T0082483.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25428954 25433264 - MGP_BALBcJ_P0082483 Snrpa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082484.1 MGP_BALBcJ_G0031885.1 mouse_genomes_project 7 25431703 25433393 - Snrpa protein_coding retained_intron MGP_BALBcJ_T0002236.1 MGP_BALBcJ_G0002148.1 mouse_genomes_project 7 63561298 63562827 + TEC TEC MGP_BALBcJ_T0085507.1 MGP_BALBcJ_G0032627.1 mouse_genomes_project 7 103117113 103118476 + MGP_BALBcJ_P0085507 Olfr582 protein_coding protein_coding MGP_BALBcJ_T0085362.1 MGP_BALBcJ_G0032574.1 mouse_genomes_project 7 101861188 101865602 + MGP_BALBcJ_P0085362 Phox2a protein_coding protein_coding MGP_BALBcJ_T0083314.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34149386 34190504 + MGP_BALBcJ_P0083314 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083315.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34149406 34190506 + MGP_BALBcJ_P0083315 protein_coding protein_coding MGP_BALBcJ_T0083316.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34149458 34163200 + protein_coding retained_intron MGP_BALBcJ_T0083317.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34149467 34161854 + protein_coding processed_transcript MGP_BALBcJ_T0083318.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34149481 34161837 + MGP_BALBcJ_P0083318 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083319.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34149519 34190385 + MGP_BALBcJ_P0083319 protein_coding unknown_likely_coding MGP_BALBcJ_T0083320.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34168701 34170630 + protein_coding processed_transcript MGP_BALBcJ_T0083321.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34168794 34173566 + protein_coding retained_intron MGP_BALBcJ_T0083322.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34170163 34180346 + MGP_BALBcJ_P0083322 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083323.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34170650 34179847 + protein_coding processed_transcript MGP_BALBcJ_T0083324.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34179360 34184747 + protein_coding retained_intron MGP_BALBcJ_T0083325.1 MGP_BALBcJ_G0032075.1 mouse_genomes_project 7 34180453 34190498 + MGP_BALBcJ_P0083325 protein_coding protein_coding MGP_BALBcJ_T0087228.1 MGP_BALBcJ_G0033101.1 mouse_genomes_project 7 133533553 133587693 + MGP_BALBcJ_P0087228 Zranb1 protein_coding protein_coding MGP_BALBcJ_T0087229.1 MGP_BALBcJ_G0033101.1 mouse_genomes_project 7 133584602 133586510 + Zranb1 protein_coding retained_intron MGP_BALBcJ_T0084548.1 MGP_BALBcJ_G0032377.1 mouse_genomes_project 7 78980466 79069474 + MGP_BALBcJ_P0084548 Abhd2 protein_coding protein_coding MGP_BALBcJ_T0084549.1 MGP_BALBcJ_G0032377.1 mouse_genomes_project 7 78980521 79049418 + Abhd2 protein_coding processed_transcript MGP_BALBcJ_T0002281.1 MGP_BALBcJ_G0002192.1 mouse_genomes_project 7 92492768 92493087 + TEC TEC MGP_BALBcJ_T0008886.1 MGP_BALBcJ_G0007173.1 mouse_genomes_project 7 71575648 71590112 - Gm36633 lincRNA lincRNA MGP_BALBcJ_T0015883.1 MGP_BALBcJ_G0013980.1 mouse_genomes_project 7 125690786 125691224 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015812.1 MGP_BALBcJ_G0013909.1 mouse_genomes_project 7 74392467 74392972 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008907.1 MGP_BALBcJ_G0007191.1 mouse_genomes_project 7 74478280 74513448 - 0610006L08Rik lincRNA lincRNA MGP_BALBcJ_T0008908.1 MGP_BALBcJ_G0007191.1 mouse_genomes_project 7 74483095 74513445 - 0610006L08Rik lincRNA lincRNA MGP_BALBcJ_T0085791.1 MGP_BALBcJ_G0032783.1 mouse_genomes_project 7 107852254 107874182 + MGP_BALBcJ_P0085791 Olfml1 protein_coding protein_coding MGP_BALBcJ_T0082232.1 MGP_BALBcJ_G0031827.1 mouse_genomes_project 7 22777639 22795658 - MGP_BALBcJ_P0082232 Cd177 protein_coding protein_coding MGP_BALBcJ_T0082233.1 MGP_BALBcJ_G0031827.1 mouse_genomes_project 7 22778783 22786340 - Cd177 protein_coding retained_intron MGP_BALBcJ_T0010875.1 MGP_BALBcJ_G0009000.1 mouse_genomes_project 7 61612511 61612599 - Mir344i miRNA miRNA MGP_BALBcJ_T0082801.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27676598 27689973 + MGP_BALBcJ_P0082801 Dpf1 protein_coding protein_coding MGP_BALBcJ_T0082802.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27676623 27690294 + MGP_BALBcJ_P0082802 Dpf1 protein_coding protein_coding MGP_BALBcJ_T0082803.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27680568 27689605 + MGP_BALBcJ_P0082803 Dpf1 protein_coding protein_coding MGP_BALBcJ_T0082804.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27680656 27689597 + Dpf1 protein_coding retained_intron MGP_BALBcJ_T0082805.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27680656 27689612 + MGP_BALBcJ_P0082805 Dpf1 protein_coding protein_coding MGP_BALBcJ_T0082806.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27680662 27690290 + Dpf1 protein_coding processed_transcript MGP_BALBcJ_T0082807.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27682157 27685928 + MGP_BALBcJ_P0082807 Dpf1 protein_coding protein_coding MGP_BALBcJ_T0082808.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27682250 27684342 + Dpf1 protein_coding processed_transcript MGP_BALBcJ_T0082809.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27685649 27688446 + MGP_BALBcJ_P0082809 Dpf1 protein_coding protein_coding MGP_BALBcJ_T0082810.1 MGP_BALBcJ_G0031967.1 mouse_genomes_project 7 27686851 27689272 + Dpf1 protein_coding retained_intron MGP_BALBcJ_T0084915.1 MGP_BALBcJ_G0032465.1 mouse_genomes_project 7 86311599 86312592 + MGP_BALBcJ_P0084915 Olfr299 protein_coding protein_coding MGP_BALBcJ_T0102739.1 MGP_BALBcJ_G0040554.1 mouse_genomes_project 7 41275718 41278188 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0086229.1 MGP_BALBcJ_G0032909.1 mouse_genomes_project 7 120358680 120380412 + MGP_BALBcJ_P0086229 Lyrm1 protein_coding protein_coding MGP_BALBcJ_T0086230.1 MGP_BALBcJ_G0032909.1 mouse_genomes_project 7 120358686 120379943 + MGP_BALBcJ_P0086230 Lyrm1 protein_coding protein_coding MGP_BALBcJ_T0086231.1 MGP_BALBcJ_G0032909.1 mouse_genomes_project 7 120359111 120380408 + MGP_BALBcJ_P0086231 Lyrm1 protein_coding protein_coding MGP_BALBcJ_T0086232.1 MGP_BALBcJ_G0032909.1 mouse_genomes_project 7 120362937 120380414 + MGP_BALBcJ_P0086232 Lyrm1 protein_coding protein_coding MGP_BALBcJ_T0081837.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14432114 14459237 + MGP_BALBcJ_P0081837 Prkd2 protein_coding protein_coding MGP_BALBcJ_T0081838.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14432277 14459329 + MGP_BALBcJ_P0081838 Prkd2 protein_coding protein_coding MGP_BALBcJ_T0081839.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14433373 14437930 + Prkd2 protein_coding processed_transcript MGP_BALBcJ_T0081840.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14434447 14436848 + Prkd2 protein_coding processed_transcript MGP_BALBcJ_T0081841.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14435015 14439666 + Prkd2 protein_coding retained_intron MGP_BALBcJ_T0081842.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14437873 14443043 + Prkd2 protein_coding retained_intron MGP_BALBcJ_T0081843.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14452239 14458755 + Prkd2 protein_coding retained_intron MGP_BALBcJ_T0081844.1 MGP_BALBcJ_G0031698.1 mouse_genomes_project 7 14458116 14459001 + Prkd2 protein_coding retained_intron MGP_BALBcJ_T0087733.1 MGP_BALBcJ_G0033230.1 mouse_genomes_project 7 142919617 142925078 - MGP_BALBcJ_P0087733 protein_coding protein_coding MGP_BALBcJ_T0002222.1 MGP_BALBcJ_G0002134.1 mouse_genomes_project 7 48759033 48762613 + TEC TEC MGP_BALBcJ_T0084048.1 MGP_BALBcJ_G0032264.1 mouse_genomes_project 7 46223441 46250680 + MGP_BALBcJ_P0084048 Gtf2h1 protein_coding protein_coding MGP_BALBcJ_T0084049.1 MGP_BALBcJ_G0032264.1 mouse_genomes_project 7 46223452 46232355 + MGP_BALBcJ_P0084049 Gtf2h1 protein_coding protein_coding MGP_BALBcJ_T0084050.1 MGP_BALBcJ_G0032264.1 mouse_genomes_project 7 46224009 46250155 + MGP_BALBcJ_P0084050 Gtf2h1 protein_coding protein_coding MGP_BALBcJ_T0084051.1 MGP_BALBcJ_G0032264.1 mouse_genomes_project 7 46229014 46249789 + MGP_BALBcJ_P0084051 Gtf2h1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084052.1 MGP_BALBcJ_G0032264.1 mouse_genomes_project 7 46235779 46242746 + Gtf2h1 protein_coding retained_intron MGP_BALBcJ_T0101964.1 MGP_BALBcJ_G0039820.1 mouse_genomes_project 7 12011012 12079371 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0081904.1 MGP_BALBcJ_G0031726.1 mouse_genomes_project 7 16660949 16679441 + MGP_BALBcJ_P0081904 Mill2 protein_coding protein_coding MGP_BALBcJ_T0081905.1 MGP_BALBcJ_G0031726.1 mouse_genomes_project 7 16660949 16679441 + MGP_BALBcJ_P0081905 Mill2 protein_coding protein_coding MGP_BALBcJ_T0081906.1 MGP_BALBcJ_G0031726.1 mouse_genomes_project 7 16660972 16683904 + MGP_BALBcJ_P0081906 Mill2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081907.1 MGP_BALBcJ_G0031726.1 mouse_genomes_project 7 16660984 16676833 + Mill2 protein_coding processed_transcript MGP_BALBcJ_T0081191.1 MGP_BALBcJ_G0031497.1 mouse_genomes_project 7 118257 152321 - MGP_BALBcJ_P0081191 Nlrp12 protein_coding protein_coding MGP_BALBcJ_T0081192.1 MGP_BALBcJ_G0031497.1 mouse_genomes_project 7 142197 152448 - Nlrp12 protein_coding retained_intron MGP_BALBcJ_T0008941.1 MGP_BALBcJ_G0007207.1 mouse_genomes_project 7 88164113 88168821 - Gm26522 lincRNA lincRNA MGP_BALBcJ_T0018340.1 MGP_BALBcJ_G0015613.1 mouse_genomes_project 7 63508109 63511276 + Gm27252 processed_transcript lincRNA MGP_BALBcJ_T0018341.1 MGP_BALBcJ_G0015613.1 mouse_genomes_project 7 63509551 63511107 + Gm27252 processed_transcript antisense MGP_BALBcJ_T0081796.1 MGP_BALBcJ_G0031687.1 mouse_genomes_project 7 13905800 13967917 - MGP_BALBcJ_P0081796 Sae1 protein_coding protein_coding MGP_BALBcJ_T0087006.1 MGP_BALBcJ_G0033056.1 mouse_genomes_project 7 128634891 128655981 + MGP_BALBcJ_P0087006 protein_coding protein_coding MGP_BALBcJ_T0087007.1 MGP_BALBcJ_G0033056.1 mouse_genomes_project 7 128634895 128639416 + MGP_BALBcJ_P0087007 protein_coding protein_coding MGP_BALBcJ_T0087008.1 MGP_BALBcJ_G0033056.1 mouse_genomes_project 7 128640120 128640826 + protein_coding retained_intron MGP_BALBcJ_T0087009.1 MGP_BALBcJ_G0033056.1 mouse_genomes_project 7 128652786 128653559 + protein_coding retained_intron MGP_BALBcJ_T0018374.1 MGP_BALBcJ_G0015627.1 mouse_genomes_project 7 124439469 124449262 - Gm26974 processed_transcript lincRNA MGP_BALBcJ_T0018375.1 MGP_BALBcJ_G0015627.1 mouse_genomes_project 7 124446892 124448876 - Gm26974 processed_transcript lincRNA MGP_BALBcJ_T0018376.1 MGP_BALBcJ_G0015627.1 mouse_genomes_project 7 124446894 124448380 - Gm26974 processed_transcript retained_intron MGP_BALBcJ_T0082452.1 MGP_BALBcJ_G0031877.1 mouse_genomes_project 7 25199131 25207560 + Cyp2a12 protein_coding retained_intron MGP_BALBcJ_T0082453.1 MGP_BALBcJ_G0031877.1 mouse_genomes_project 7 25199140 25207017 + MGP_BALBcJ_P0082453 Cyp2a12 protein_coding protein_coding MGP_BALBcJ_T0084532.1 MGP_BALBcJ_G0032374.1 mouse_genomes_project 7 78754159 78816523 + MGP_BALBcJ_P0084532 Acan protein_coding protein_coding MGP_BALBcJ_T0084533.1 MGP_BALBcJ_G0032374.1 mouse_genomes_project 7 78801185 78816051 + MGP_BALBcJ_P0084533 Acan protein_coding protein_coding MGP_BALBcJ_T0015811.1 MGP_BALBcJ_G0013908.1 mouse_genomes_project 7 74344892 74345120 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015905.1 MGP_BALBcJ_G0014002.1 mouse_genomes_project 7 139610006 139610933 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087549.1 MGP_BALBcJ_G0033199.1 mouse_genomes_project 7 141941370 141945408 - MGP_BALBcJ_P0087549 Lmntd2 protein_coding protein_coding MGP_BALBcJ_T0087550.1 MGP_BALBcJ_G0033199.1 mouse_genomes_project 7 141941370 141945410 - MGP_BALBcJ_P0087550 Lmntd2 protein_coding protein_coding MGP_BALBcJ_T0081741.1 MGP_BALBcJ_G0031676.1 mouse_genomes_project 7 13631954 13656303 + MGP_BALBcJ_P0081741 Zfp541 protein_coding protein_coding MGP_BALBcJ_T0100051.1 MGP_BALBcJ_G0038087.1 mouse_genomes_project 7 14544332 14544439 - Gm25815 snRNA snRNA MGP_BALBcJ_T0008927.1 MGP_BALBcJ_G0007202.1 mouse_genomes_project 7 80017727 80019612 - 6330403N20Rik lincRNA lincRNA MGP_BALBcJ_T0015862.1 MGP_BALBcJ_G0013959.1 mouse_genomes_project 7 104870895 104871948 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011681.1 MGP_BALBcJ_G0009806.1 mouse_genomes_project 7 143342543 143342613 + Gm27786 misc_RNA misc_RNA MGP_BALBcJ_T0102828.1 MGP_BALBcJ_G0040643.1 mouse_genomes_project 7 105952492 106913567 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008790.1 MGP_BALBcJ_G0007097.1 mouse_genomes_project 7 17452213 17457230 - Gm26890 lincRNA lincRNA MGP_BALBcJ_T0087325.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139540175 139565929 + Ppp2r2d protein_coding retained_intron MGP_BALBcJ_T0087326.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139540482 139564011 + MGP_BALBcJ_P0087326 Ppp2r2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087327.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139540605 139576754 + MGP_BALBcJ_P0087327 Ppp2r2d protein_coding protein_coding MGP_BALBcJ_T0087328.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139540683 139564054 + Ppp2r2d protein_coding processed_transcript MGP_BALBcJ_T0087329.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139540716 139570795 + MGP_BALBcJ_P0087329 Ppp2r2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087330.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139540956 139564029 + Ppp2r2d protein_coding processed_transcript MGP_BALBcJ_T0087331.1 MGP_BALBcJ_G0033126.1 mouse_genomes_project 7 139562636 139570789 + MGP_BALBcJ_P0087331 Ppp2r2d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101963.1 MGP_BALBcJ_G0039819.1 mouse_genomes_project 7 634627 674743 - transcribed_unprocessed_pseudogene retained_intron MGP_BALBcJ_T0002233.1 MGP_BALBcJ_G0002145.1 mouse_genomes_project 7 55578585 55582611 - TEC TEC MGP_BALBcJ_T0085351.1 MGP_BALBcJ_G0032572.1 mouse_genomes_project 7 101587960 101604611 - MGP_BALBcJ_P0085351 protein_coding protein_coding MGP_BALBcJ_T0008794.1 MGP_BALBcJ_G0007101.1 mouse_genomes_project 7 22997128 23000453 + Gm44970 lincRNA lincRNA MGP_BALBcJ_T0087440.1 MGP_BALBcJ_G0033157.1 mouse_genomes_project 7 141026635 141027613 + MGP_BALBcJ_P0087440 Olfr527 protein_coding protein_coding MGP_BALBcJ_T0100092.1 MGP_BALBcJ_G0038128.1 mouse_genomes_project 7 117135132 117135239 - Gm25423 snRNA snRNA MGP_BALBcJ_T0005166.1 MGP_BALBcJ_G0004401.1 mouse_genomes_project 7 29371834 29372613 + Gm4673 antisense antisense MGP_BALBcJ_T0005167.1 MGP_BALBcJ_G0004401.1 mouse_genomes_project 7 29372167 29376378 + Gm4673 antisense antisense MGP_BALBcJ_T0087251.1 MGP_BALBcJ_G0033104.1 mouse_genomes_project 7 134267874 134303296 + MGP_BALBcJ_P0087251 Edrf1 protein_coding protein_coding MGP_BALBcJ_T0087252.1 MGP_BALBcJ_G0033104.1 mouse_genomes_project 7 134268024 134302504 + MGP_BALBcJ_P0087252 Edrf1 protein_coding protein_coding MGP_BALBcJ_T0087253.1 MGP_BALBcJ_G0033104.1 mouse_genomes_project 7 134268192 134269674 + Edrf1 protein_coding retained_intron MGP_BALBcJ_T0087254.1 MGP_BALBcJ_G0033104.1 mouse_genomes_project 7 134287429 134292206 + MGP_BALBcJ_P0087254 Edrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087255.1 MGP_BALBcJ_G0033104.1 mouse_genomes_project 7 134296250 134302254 + MGP_BALBcJ_P0087255 Edrf1 protein_coding protein_coding MGP_BALBcJ_T0087256.1 MGP_BALBcJ_G0033104.1 mouse_genomes_project 7 134297530 134301795 + Edrf1 protein_coding retained_intron MGP_BALBcJ_T0082949.1 MGP_BALBcJ_G0032000.1 mouse_genomes_project 7 28743578 28750860 - MGP_BALBcJ_P0082949 Lrfn3 protein_coding protein_coding MGP_BALBcJ_T0086184.1 MGP_BALBcJ_G0032899.1 mouse_genomes_project 7 119940480 119975978 - MGP_BALBcJ_P0086184 Pdilt protein_coding protein_coding MGP_BALBcJ_T0081717.1 MGP_BALBcJ_G0031664.1 mouse_genomes_project 7 12010351 12012015 - MGP_BALBcJ_P0081717 Vmn1r90 protein_coding protein_coding MGP_BALBcJ_T0081573.1 MGP_BALBcJ_G0031604.1 mouse_genomes_project 7 7497977 7499480 - MGP_BALBcJ_P0081573 Vmn1r66 protein_coding protein_coding MGP_BALBcJ_T0083453.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42534669 42551722 - MGP_BALBcJ_P0083453 Zfp715 protein_coding protein_coding MGP_BALBcJ_T0083454.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42534995 42551730 - MGP_BALBcJ_P0083454 Zfp715 protein_coding protein_coding MGP_BALBcJ_T0083455.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42534995 42549961 - MGP_BALBcJ_P0083455 Zfp715 protein_coding protein_coding MGP_BALBcJ_T0083456.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42534995 42551738 - MGP_BALBcJ_P0083456 Zfp715 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083457.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42538424 42551570 - MGP_BALBcJ_P0083457 Zfp715 protein_coding protein_coding MGP_BALBcJ_T0083458.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42539948 42551769 - Zfp715 protein_coding retained_intron MGP_BALBcJ_T0083459.1 MGP_BALBcJ_G0032107.1 mouse_genomes_project 7 42540082 42551538 - MGP_BALBcJ_P0083459 Zfp715 protein_coding protein_coding MGP_BALBcJ_T0084091.1 MGP_BALBcJ_G0032283.1 mouse_genomes_project 7 48110339 48117453 - MGP_BALBcJ_P0084091 Mrgprb2 protein_coding protein_coding MGP_BALBcJ_T0086119.1 MGP_BALBcJ_G0032883.1 mouse_genomes_project 7 118577316 118587695 - MGP_BALBcJ_P0086119 Arl6ip1 protein_coding protein_coding MGP_BALBcJ_T0086120.1 MGP_BALBcJ_G0032883.1 mouse_genomes_project 7 118578675 118587143 - Arl6ip1 protein_coding processed_transcript MGP_BALBcJ_T0086121.1 MGP_BALBcJ_G0032883.1 mouse_genomes_project 7 118578723 118587609 - MGP_BALBcJ_P0086121 Arl6ip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086122.1 MGP_BALBcJ_G0032883.1 mouse_genomes_project 7 118579625 118587607 - MGP_BALBcJ_P0086122 Arl6ip1 protein_coding protein_coding MGP_BALBcJ_T0086123.1 MGP_BALBcJ_G0032883.1 mouse_genomes_project 7 118579652 118587593 - MGP_BALBcJ_P0086123 Arl6ip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086124.1 MGP_BALBcJ_G0032883.1 mouse_genomes_project 7 118584325 118587605 - Arl6ip1 protein_coding retained_intron MGP_BALBcJ_T0101344.1 MGP_BALBcJ_G0039380.1 mouse_genomes_project 7 99417650 99417798 - Snord15a snoRNA snoRNA MGP_BALBcJ_T0100046.1 MGP_BALBcJ_G0038082.1 mouse_genomes_project 7 1714398 1714500 + Gm24537 snRNA snRNA MGP_BALBcJ_T0015759.1 MGP_BALBcJ_G0013856.1 mouse_genomes_project 7 38680385 38680928 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084337.1 MGP_BALBcJ_G0032337.1 mouse_genomes_project 7 65616845 65635927 + MGP_BALBcJ_P0084337 Gm45213 protein_coding protein_coding MGP_BALBcJ_T0008862.1 MGP_BALBcJ_G0007156.1 mouse_genomes_project 7 63675114 63680532 + Gm20670 lincRNA lincRNA MGP_BALBcJ_T0085645.1 MGP_BALBcJ_G0032731.1 mouse_genomes_project 7 105451273 105452349 + MGP_BALBcJ_P0085645 Olfr689 protein_coding protein_coding MGP_BALBcJ_T0083532.1 MGP_BALBcJ_G0032132.1 mouse_genomes_project 7 43038381 43043223 + MGP_BALBcJ_P0083532 Klk9 protein_coding protein_coding MGP_BALBcJ_T0081845.1 MGP_BALBcJ_G0031699.1 mouse_genomes_project 7 14464183 14476322 + MGP_BALBcJ_P0081845 Dact3 protein_coding protein_coding MGP_BALBcJ_T0087496.1 MGP_BALBcJ_G0033183.1 mouse_genomes_project 7 141632526 141640165 + MGP_BALBcJ_P0087496 Nlrp6 protein_coding protein_coding MGP_BALBcJ_T0087497.1 MGP_BALBcJ_G0033183.1 mouse_genomes_project 7 141632526 141640817 + MGP_BALBcJ_P0087497 Nlrp6 protein_coding protein_coding MGP_BALBcJ_T0087498.1 MGP_BALBcJ_G0033183.1 mouse_genomes_project 7 141632695 141639174 + MGP_BALBcJ_P0087498 Nlrp6 protein_coding protein_coding MGP_BALBcJ_T0087499.1 MGP_BALBcJ_G0033183.1 mouse_genomes_project 7 141633730 141634480 + Nlrp6 protein_coding retained_intron MGP_BALBcJ_T0085209.1 MGP_BALBcJ_G0032544.1 mouse_genomes_project 7 99804140 99863046 + MGP_BALBcJ_P0085209 Xrra1 protein_coding protein_coding MGP_BALBcJ_T0009002.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127462300 127466089 - lincRNA lincRNA MGP_BALBcJ_T0009003.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127463203 127466398 - lincRNA lincRNA MGP_BALBcJ_T0009004.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127463203 127466677 - lincRNA lincRNA MGP_BALBcJ_T0009005.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127463203 127466416 - lincRNA lincRNA MGP_BALBcJ_T0009006.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127463204 127466367 - lincRNA lincRNA MGP_BALBcJ_T0009007.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127463205 127466425 - lincRNA lincRNA MGP_BALBcJ_T0009008.1 MGP_BALBcJ_G0007248.1 mouse_genomes_project 7 127465432 127466631 - lincRNA lincRNA MGP_BALBcJ_T0102716.1 MGP_BALBcJ_G0040531.1 mouse_genomes_project 7 21731288 21732178 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008847.1 MGP_BALBcJ_G0007143.1 mouse_genomes_project 7 42804738 42805096 + Gm44818 lincRNA lincRNA MGP_BALBcJ_T0005158.1 MGP_BALBcJ_G0004394.1 mouse_genomes_project 7 28844438 28847855 - Nphs1os antisense antisense MGP_BALBcJ_T0085526.1 MGP_BALBcJ_G0032645.1 mouse_genomes_project 7 103584354 103585299 - MGP_BALBcJ_P0085526 protein_coding protein_coding MGP_BALBcJ_T0015901.1 MGP_BALBcJ_G0013998.1 mouse_genomes_project 7 129511603 129512289 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085630.1 MGP_BALBcJ_G0032716.1 mouse_genomes_project 7 104975038 104976019 - MGP_BALBcJ_P0085630 Olfr667 protein_coding protein_coding MGP_BALBcJ_T0015842.1 MGP_BALBcJ_G0013939.1 mouse_genomes_project 7 95821194 95822510 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002232.1 MGP_BALBcJ_G0002144.1 mouse_genomes_project 7 55558836 55559993 - TEC TEC MGP_BALBcJ_T0081982.1 MGP_BALBcJ_G0031747.1 mouse_genomes_project 7 17072087 17091675 + MGP_BALBcJ_P0081982 Opa3 protein_coding protein_coding MGP_BALBcJ_T0081983.1 MGP_BALBcJ_G0031747.1 mouse_genomes_project 7 17072136 17072866 + Opa3 protein_coding retained_intron MGP_BALBcJ_T0081984.1 MGP_BALBcJ_G0031747.1 mouse_genomes_project 7 17072136 17100341 + MGP_BALBcJ_P0081984 Opa3 protein_coding protein_coding MGP_BALBcJ_T0081757.1 MGP_BALBcJ_G0031679.1 mouse_genomes_project 7 13690591 13721061 + MGP_BALBcJ_P0081757 Slc8a2 protein_coding protein_coding MGP_BALBcJ_T0008906.1 MGP_BALBcJ_G0007190.1 mouse_genomes_project 7 74432280 74437542 + Gm30459 lincRNA lincRNA MGP_BALBcJ_T0084792.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81094942 81199833 - MGP_BALBcJ_P0084792 Cpeb1 protein_coding protein_coding MGP_BALBcJ_T0084793.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81094944 81181264 - MGP_BALBcJ_P0084793 Cpeb1 protein_coding protein_coding MGP_BALBcJ_T0084794.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81094945 81199833 - MGP_BALBcJ_P0084794 Cpeb1 protein_coding protein_coding MGP_BALBcJ_T0084795.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81097236 81098426 - Cpeb1 protein_coding retained_intron MGP_BALBcJ_T0084796.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81097517 81103911 - Cpeb1 protein_coding processed_transcript MGP_BALBcJ_T0084797.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81110184 81121718 - Cpeb1 protein_coding retained_intron MGP_BALBcJ_T0084798.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81110184 81200540 - Cpeb1 protein_coding processed_transcript MGP_BALBcJ_T0084799.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81110348 81121762 - Cpeb1 protein_coding processed_transcript MGP_BALBcJ_T0084800.1 MGP_BALBcJ_G0032419.1 mouse_genomes_project 7 81181110 81200467 - Cpeb1 protein_coding processed_transcript MGP_BALBcJ_T0101337.1 MGP_BALBcJ_G0039373.1 mouse_genomes_project 7 81726798 81726923 + Gm25907 snoRNA snoRNA MGP_BALBcJ_T0087145.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131417296 131465117 + MGP_BALBcJ_P0087145 Plekha1 protein_coding protein_coding MGP_BALBcJ_T0087146.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131417425 131446509 + Plekha1 protein_coding retained_intron MGP_BALBcJ_T0087147.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131417427 131429953 + Plekha1 protein_coding retained_intron MGP_BALBcJ_T0087148.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131417438 131463873 + MGP_BALBcJ_P0087148 Plekha1 protein_coding protein_coding MGP_BALBcJ_T0087149.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131417443 131461636 + MGP_BALBcJ_P0087149 Plekha1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087150.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131417450 131465107 + MGP_BALBcJ_P0087150 Plekha1 protein_coding protein_coding MGP_BALBcJ_T0087151.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131434132 131437301 + Plekha1 protein_coding retained_intron MGP_BALBcJ_T0087152.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131448749 131457237 + Plekha1 protein_coding retained_intron MGP_BALBcJ_T0087153.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131452344 131461491 + Plekha1 protein_coding processed_transcript MGP_BALBcJ_T0087154.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131454055 131460715 + Plekha1 protein_coding retained_intron MGP_BALBcJ_T0087155.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131456714 131462968 + MGP_BALBcJ_P0087155 Plekha1 protein_coding protein_coding MGP_BALBcJ_T0087156.1 MGP_BALBcJ_G0033078.1 mouse_genomes_project 7 131457114 131462706 + Plekha1 protein_coding retained_intron MGP_BALBcJ_T0002188.1 MGP_BALBcJ_G0002100.1 mouse_genomes_project 7 243979 244314 + TEC TEC MGP_BALBcJ_T0015871.1 MGP_BALBcJ_G0013968.1 mouse_genomes_project 7 115106970 115108097 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010872.1 MGP_BALBcJ_G0008997.1 mouse_genomes_project 7 61507085 61507156 - Mir344g miRNA miRNA MGP_BALBcJ_T0005270.1 MGP_BALBcJ_G0004472.1 mouse_genomes_project 7 128008410 128010842 - 1700008J07Rik antisense antisense MGP_BALBcJ_T0015782.1 MGP_BALBcJ_G0013879.1 mouse_genomes_project 7 47698584 47699254 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099008.1 MGP_BALBcJ_G0037051.1 mouse_genomes_project 7 33794106 33795245 - Gm44836 sense_intronic sense_intronic MGP_BALBcJ_T0102736.1 MGP_BALBcJ_G0040551.1 mouse_genomes_project 7 34194664 34197336 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087422.1 MGP_BALBcJ_G0033148.1 mouse_genomes_project 7 140807958 140817945 + MGP_BALBcJ_P0087422 Paox protein_coding protein_coding MGP_BALBcJ_T0087423.1 MGP_BALBcJ_G0033148.1 mouse_genomes_project 7 140808009 140817945 + MGP_BALBcJ_P0087423 Paox protein_coding protein_coding MGP_BALBcJ_T0084972.1 MGP_BALBcJ_G0032488.1 mouse_genomes_project 7 89963030 90043081 + MGP_BALBcJ_P0084972 Picalm protein_coding protein_coding MGP_BALBcJ_T0084973.1 MGP_BALBcJ_G0032488.1 mouse_genomes_project 7 89963371 90041236 + MGP_BALBcJ_P0084973 Picalm protein_coding unknown_likely_coding MGP_BALBcJ_T0015736.1 MGP_BALBcJ_G0013833.1 mouse_genomes_project 7 25379698 25379945 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005220.1 MGP_BALBcJ_G0004439.1 mouse_genomes_project 7 80480320 80486981 + Gm44649 antisense antisense MGP_BALBcJ_T0005221.1 MGP_BALBcJ_G0004439.1 mouse_genomes_project 7 80480343 80481644 + Gm44649 antisense antisense MGP_BALBcJ_T0101350.1 MGP_BALBcJ_G0039386.1 mouse_genomes_project 7 109860031 109860161 + Gm24888 snoRNA snoRNA MGP_BALBcJ_T0101343.1 MGP_BALBcJ_G0039379.1 mouse_genomes_project 7 99414428 99414573 - Snord15b snoRNA snoRNA MGP_BALBcJ_T0084894.1 MGP_BALBcJ_G0032449.1 mouse_genomes_project 7 84347572 84368548 - MGP_BALBcJ_P0084894 Fah protein_coding protein_coding MGP_BALBcJ_T0084895.1 MGP_BALBcJ_G0032449.1 mouse_genomes_project 7 84357933 84369446 - MGP_BALBcJ_P0084895 Fah protein_coding protein_coding MGP_BALBcJ_T0084896.1 MGP_BALBcJ_G0032449.1 mouse_genomes_project 7 84363454 84364478 - Fah protein_coding processed_transcript MGP_BALBcJ_T0084897.1 MGP_BALBcJ_G0032449.1 mouse_genomes_project 7 84363998 84368450 - Fah protein_coding retained_intron MGP_BALBcJ_T0102754.1 MGP_BALBcJ_G0040569.1 mouse_genomes_project 7 46761955 46762873 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005210.1 MGP_BALBcJ_G0004432.1 mouse_genomes_project 7 79418706 79420777 + 9330171B17Rik antisense antisense MGP_BALBcJ_T0005211.1 MGP_BALBcJ_G0004432.1 mouse_genomes_project 7 79418794 79420779 + 9330171B17Rik antisense antisense MGP_BALBcJ_T0101361.1 MGP_BALBcJ_G0039397.1 mouse_genomes_project 7 124630960 124631089 + Gm25759 snoRNA snoRNA MGP_BALBcJ_T0087944.1 MGP_BALBcJ_G0033272.1 mouse_genomes_project 7 145367427 145372561 - MGP_BALBcJ_P0087944 Fadd protein_coding protein_coding MGP_BALBcJ_T0102669.1 MGP_BALBcJ_G0040484.1 mouse_genomes_project 7 1188021 1188865 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083414.1 MGP_BALBcJ_G0032091.1 mouse_genomes_project 7 38467101 38489597 + MGP_BALBcJ_P0083414 Zfp619 protein_coding protein_coding MGP_BALBcJ_T0011673.1 MGP_BALBcJ_G0009798.1 mouse_genomes_project 7 103393280 103393601 + Gm23973 misc_RNA misc_RNA MGP_BALBcJ_T0005281.1 MGP_BALBcJ_G0004482.1 mouse_genomes_project 7 133199134 133201385 + Gm16764 antisense antisense MGP_BALBcJ_T0005282.1 MGP_BALBcJ_G0004482.1 mouse_genomes_project 7 133199134 133201385 + Gm16764 antisense antisense MGP_BALBcJ_T0005283.1 MGP_BALBcJ_G0004482.1 mouse_genomes_project 7 133199150 133201385 + Gm16764 antisense antisense MGP_BALBcJ_T0085649.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105494861 105523679 - MGP_BALBcJ_P0085649 Fam160a2 protein_coding protein_coding MGP_BALBcJ_T0085650.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105494861 105523701 - MGP_BALBcJ_P0085650 Fam160a2 protein_coding protein_coding MGP_BALBcJ_T0085652.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105502260 105523701 - MGP_BALBcJ_P0085652 Fam160a2 protein_coding protein_coding MGP_BALBcJ_T0085653.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105502260 105523632 - MGP_BALBcJ_P0085653 Fam160a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085654.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105502261 105523655 - MGP_BALBcJ_P0085654 Fam160a2 protein_coding protein_coding MGP_BALBcJ_T0085655.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105502261 105523658 - MGP_BALBcJ_P0085655 Fam160a2 protein_coding protein_coding MGP_BALBcJ_T0085656.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105502726 105505632 - Fam160a2 protein_coding retained_intron MGP_BALBcJ_T0085657.1 MGP_BALBcJ_G0032735.1 mouse_genomes_project 7 105509038 105512762 - Fam160a2 protein_coding retained_intron MGP_BALBcJ_T0085533.1 MGP_BALBcJ_G0032652.1 mouse_genomes_project 7 103684097 103688687 + MGP_BALBcJ_P0085533 Olfr613 protein_coding protein_coding MGP_BALBcJ_T0086287.1 MGP_BALBcJ_G0032926.1 mouse_genomes_project 7 121506333 121508178 - MGP_BALBcJ_P0086287 protein_coding protein_coding MGP_BALBcJ_T0102771.1 MGP_BALBcJ_G0040586.1 mouse_genomes_project 7 47937902 47938482 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082115.1 MGP_BALBcJ_G0031786.1 mouse_genomes_project 7 17870276 17915028 + MGP_BALBcJ_P0082115 Nlrp9b protein_coding protein_coding MGP_BALBcJ_T0082116.1 MGP_BALBcJ_G0031786.1 mouse_genomes_project 7 17887462 17937564 + MGP_BALBcJ_P0082116 Nlrp9b protein_coding protein_coding MGP_BALBcJ_T0010920.1 MGP_BALBcJ_G0009045.1 mouse_genomes_project 7 144572208 144572269 + Gm22064 miRNA miRNA MGP_BALBcJ_T0101334.1 MGP_BALBcJ_G0039370.1 mouse_genomes_project 7 67149545 67149682 - Gm23233 snoRNA snoRNA MGP_BALBcJ_T0009038.1 MGP_BALBcJ_G0007270.1 mouse_genomes_project 7 143340223 143343501 - H19 lincRNA lincRNA MGP_BALBcJ_T0009039.1 MGP_BALBcJ_G0007270.1 mouse_genomes_project 7 143340252 143342815 - H19 lincRNA lincRNA MGP_BALBcJ_T0009040.1 MGP_BALBcJ_G0007270.1 mouse_genomes_project 7 143340328 143341233 - H19 lincRNA lincRNA MGP_BALBcJ_T0009041.1 MGP_BALBcJ_G0007270.1 mouse_genomes_project 7 143340990 143341605 - H19 lincRNA lincRNA MGP_BALBcJ_T0009042.1 MGP_BALBcJ_G0007270.1 mouse_genomes_project 7 143341201 143342790 - H19 lincRNA lincRNA MGP_BALBcJ_T0083755.1 MGP_BALBcJ_G0032186.1 mouse_genomes_project 7 44393191 44423023 - MGP_BALBcJ_P0083755 Prr12 protein_coding protein_coding MGP_BALBcJ_T0005287.1 MGP_BALBcJ_G0004486.1 mouse_genomes_project 7 142352767 142356449 - Gm16982 antisense antisense MGP_BALBcJ_T0015888.1 MGP_BALBcJ_G0013985.1 mouse_genomes_project 7 127224838 127225067 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084901.1 MGP_BALBcJ_G0032452.1 mouse_genomes_project 7 84677892 84678735 + MGP_BALBcJ_P0084901 Olfr290 protein_coding protein_coding MGP_BALBcJ_T0083860.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44871012 44888608 - MGP_BALBcJ_P0083860 Nucb1 protein_coding protein_coding MGP_BALBcJ_T0083861.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44872310 44881467 - MGP_BALBcJ_P0083861 Nucb1 protein_coding protein_coding MGP_BALBcJ_T0083862.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44873191 44873628 - Nucb1 protein_coding processed_transcript MGP_BALBcJ_T0083863.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44873565 44881461 - Nucb1 protein_coding processed_transcript MGP_BALBcJ_T0083864.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44876301 44876973 - Nucb1 protein_coding retained_intron MGP_BALBcJ_T0083865.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44876861 44888517 - MGP_BALBcJ_P0083865 Nucb1 protein_coding protein_coding MGP_BALBcJ_T0083866.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44879727 44888533 - MGP_BALBcJ_P0083866 Nucb1 protein_coding protein_coding MGP_BALBcJ_T0083867.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44881275 44888591 - Nucb1 protein_coding processed_transcript MGP_BALBcJ_T0083868.1 MGP_BALBcJ_G0032218.1 mouse_genomes_project 7 44885370 44888587 - Nucb1 protein_coding retained_intron MGP_BALBcJ_T0081398.1 MGP_BALBcJ_G0031534.1 mouse_genomes_project 7 1604184 1606627 - MGP_BALBcJ_P0081398 Tmem86b protein_coding protein_coding MGP_BALBcJ_T0081399.1 MGP_BALBcJ_G0031534.1 mouse_genomes_project 7 1604186 1606332 - MGP_BALBcJ_P0081399 Tmem86b protein_coding protein_coding MGP_BALBcJ_T0081400.1 MGP_BALBcJ_G0031534.1 mouse_genomes_project 7 1604550 1607567 - MGP_BALBcJ_P0081400 Tmem86b protein_coding protein_coding MGP_BALBcJ_T0081401.1 MGP_BALBcJ_G0031534.1 mouse_genomes_project 7 1604748 1606481 - MGP_BALBcJ_P0081401 Tmem86b protein_coding protein_coding MGP_BALBcJ_T0085727.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105865060 105871386 + MGP_BALBcJ_P0085727 Ilk protein_coding protein_coding MGP_BALBcJ_T0085728.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105865139 105871379 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085729.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105865193 105871386 + MGP_BALBcJ_P0085729 Ilk protein_coding protein_coding MGP_BALBcJ_T0085730.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105865201 105869504 + MGP_BALBcJ_P0085730 Ilk protein_coding protein_coding MGP_BALBcJ_T0085731.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105865569 105869822 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085732.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105865591 105869936 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085734.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105868648 105870225 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085735.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105868971 105869635 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085736.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105868971 105870369 + MGP_BALBcJ_P0085736 Ilk protein_coding protein_coding MGP_BALBcJ_T0085737.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105869432 105870371 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085738.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105869642 105870557 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085739.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105870043 105871237 + Ilk protein_coding retained_intron MGP_BALBcJ_T0085740.1 MGP_BALBcJ_G0032748.1 mouse_genomes_project 7 105870241 105871118 + Ilk protein_coding processed_transcript MGP_BALBcJ_T0008968.1 MGP_BALBcJ_G0007226.1 mouse_genomes_project 7 114731914 114826290 - 4933406I18Rik lincRNA lincRNA MGP_BALBcJ_T0008969.1 MGP_BALBcJ_G0007226.1 mouse_genomes_project 7 114771227 114826150 - 4933406I18Rik lincRNA lincRNA MGP_BALBcJ_T0083894.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44956317 44975938 + MGP_BALBcJ_P0083894 Bcat2 protein_coding protein_coding MGP_BALBcJ_T0083895.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44956514 44972991 + Bcat2 protein_coding retained_intron MGP_BALBcJ_T0083896.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44956537 44975938 + MGP_BALBcJ_P0083896 Bcat2 protein_coding protein_coding MGP_BALBcJ_T0083897.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44957160 44975938 + MGP_BALBcJ_P0083897 Bcat2 protein_coding protein_coding MGP_BALBcJ_T0083898.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44959033 44975938 + MGP_BALBcJ_P0083898 Bcat2 protein_coding protein_coding MGP_BALBcJ_T0083899.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44961254 44971257 + MGP_BALBcJ_P0083899 Bcat2 protein_coding protein_coding MGP_BALBcJ_T0083900.1 MGP_BALBcJ_G0032222.1 mouse_genomes_project 7 44961376 44971376 + Bcat2 protein_coding retained_intron MGP_BALBcJ_T0002292.1 MGP_BALBcJ_G0002203.1 mouse_genomes_project 7 122859878 122861676 + TEC TEC MGP_BALBcJ_T0082426.1 MGP_BALBcJ_G0031867.1 mouse_genomes_project 7 24292602 24334211 + MGP_BALBcJ_P0082426 protein_coding protein_coding MGP_BALBcJ_T0085290.1 MGP_BALBcJ_G0032562.1 mouse_genomes_project 7 100825316 100842214 - MGP_BALBcJ_P0085290 Relt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085291.1 MGP_BALBcJ_G0032562.1 mouse_genomes_project 7 100826016 100831901 - MGP_BALBcJ_P0085291 Relt protein_coding protein_coding MGP_BALBcJ_T0085292.1 MGP_BALBcJ_G0032562.1 mouse_genomes_project 7 100829897 100834215 - MGP_BALBcJ_P0085292 Relt protein_coding protein_coding MGP_BALBcJ_T0085293.1 MGP_BALBcJ_G0032562.1 mouse_genomes_project 7 100829897 100835088 - MGP_BALBcJ_P0085293 Relt protein_coding protein_coding MGP_BALBcJ_T0085294.1 MGP_BALBcJ_G0032562.1 mouse_genomes_project 7 100829907 100841966 - MGP_BALBcJ_P0085294 Relt protein_coding protein_coding MGP_BALBcJ_T0085295.1 MGP_BALBcJ_G0032562.1 mouse_genomes_project 7 100831842 100842206 - MGP_BALBcJ_P0085295 Relt protein_coding protein_coding MGP_BALBcJ_T0008804.1 MGP_BALBcJ_G0007109.1 mouse_genomes_project 7 28584619 28587076 + lincRNA lincRNA MGP_BALBcJ_T0084034.1 MGP_BALBcJ_G0032262.1 mouse_genomes_project 7 46161620 46165074 - MGP_BALBcJ_P0084034 Saa1 protein_coding protein_coding MGP_BALBcJ_T0087968.1 MGP_BALBcJ_G0033281.1 mouse_genomes_project 7 146114899 146127902 + MGP_BALBcJ_P0087968 Mrgprd protein_coding protein_coding MGP_BALBcJ_T0081360.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1467209 1487038 - MGP_BALBcJ_P0081360 Ppp1r12c protein_coding protein_coding MGP_BALBcJ_T0081361.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1467209 1487357 - MGP_BALBcJ_P0081361 Ppp1r12c protein_coding protein_coding MGP_BALBcJ_T0081362.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1467212 1469722 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081363.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1467277 1468324 - Ppp1r12c protein_coding processed_transcript MGP_BALBcJ_T0081364.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1469323 1470189 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081365.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1469629 1471004 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081366.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1469706 1471398 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081367.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1470895 1471622 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081368.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1471840 1472424 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081369.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1474862 1487341 - Ppp1r12c protein_coding retained_intron MGP_BALBcJ_T0081370.1 MGP_BALBcJ_G0031528.1 mouse_genomes_project 7 1475501 1487206 - MGP_BALBcJ_P0081370 Ppp1r12c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102689.1 MGP_BALBcJ_G0040504.1 mouse_genomes_project 7 9480546 9481535 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008989.1 MGP_BALBcJ_G0007239.1 mouse_genomes_project 7 125382546 125389749 + Gm45092 lincRNA lincRNA MGP_BALBcJ_T0084381.1 MGP_BALBcJ_G0032346.1 mouse_genomes_project 7 66321568 66402337 + MGP_BALBcJ_P0084381 Cers3 protein_coding protein_coding MGP_BALBcJ_T0082158.1 MGP_BALBcJ_G0031806.1 mouse_genomes_project 7 22272063 22279981 + MGP_BALBcJ_P0082158 protein_coding protein_coding MGP_BALBcJ_T0005213.1 MGP_BALBcJ_G0004434.1 mouse_genomes_project 7 79628014 79631719 + Gm26646 antisense antisense MGP_BALBcJ_T0005214.1 MGP_BALBcJ_G0004434.1 mouse_genomes_project 7 79630046 79631719 + Gm26646 antisense antisense MGP_BALBcJ_T0087165.1 MGP_BALBcJ_G0033082.1 mouse_genomes_project 7 131907822 131921603 - MGP_BALBcJ_P0087165 protein_coding protein_coding MGP_BALBcJ_T0015852.1 MGP_BALBcJ_G0013949.1 mouse_genomes_project 7 100220527 100220830 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015662.1 MGP_BALBcJ_G0013759.1 mouse_genomes_project 7 5290 5450 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100093.1 MGP_BALBcJ_G0038129.1 mouse_genomes_project 7 118740874 118740979 + Gm23229 snRNA snRNA MGP_BALBcJ_T0082459.1 MGP_BALBcJ_G0031880.1 mouse_genomes_project 7 25386071 25394957 + MGP_BALBcJ_P0082459 Cyp2t4 protein_coding protein_coding MGP_BALBcJ_T0082460.1 MGP_BALBcJ_G0031880.1 mouse_genomes_project 7 25391329 25395061 + MGP_BALBcJ_P0082460 Cyp2t4 protein_coding protein_coding MGP_BALBcJ_T0084428.1 MGP_BALBcJ_G0032354.1 mouse_genomes_project 7 67833288 67861152 - MGP_BALBcJ_P0084428 Pgpep1l protein_coding protein_coding MGP_BALBcJ_T0015800.1 MGP_BALBcJ_G0013897.1 mouse_genomes_project 7 64746115 64746689 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101978.1 MGP_BALBcJ_G0039827.1 mouse_genomes_project 7 43169146 43173634 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101979.1 MGP_BALBcJ_G0039827.1 mouse_genomes_project 7 43170950 43174761 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0085505.1 MGP_BALBcJ_G0032625.1 mouse_genomes_project 7 103048894 103049833 - MGP_BALBcJ_P0085505 Olfr577 protein_coding protein_coding MGP_BALBcJ_T0082276.1 MGP_BALBcJ_G0031836.1 mouse_genomes_project 7 23012255 23015176 - MGP_BALBcJ_P0082276 Rabac1 protein_coding protein_coding MGP_BALBcJ_T0082277.1 MGP_BALBcJ_G0031836.1 mouse_genomes_project 7 23012256 23014406 - Rabac1 protein_coding retained_intron MGP_BALBcJ_T0082278.1 MGP_BALBcJ_G0031836.1 mouse_genomes_project 7 23012264 23014448 - Rabac1 protein_coding processed_transcript MGP_BALBcJ_T0082279.1 MGP_BALBcJ_G0031836.1 mouse_genomes_project 7 23012264 23015060 - MGP_BALBcJ_P0082279 Rabac1 protein_coding protein_coding MGP_BALBcJ_T0082280.1 MGP_BALBcJ_G0031836.1 mouse_genomes_project 7 23012265 23014649 - Rabac1 protein_coding processed_transcript MGP_BALBcJ_T0082281.1 MGP_BALBcJ_G0031836.1 mouse_genomes_project 7 23013918 23014974 - Rabac1 protein_coding retained_intron MGP_BALBcJ_T0086501.1 MGP_BALBcJ_G0032968.1 mouse_genomes_project 7 126922680 126939922 - MGP_BALBcJ_P0086501 Atp2a1 protein_coding protein_coding MGP_BALBcJ_T0086502.1 MGP_BALBcJ_G0032968.1 mouse_genomes_project 7 126922682 126924468 - MGP_BALBcJ_P0086502 Atp2a1 protein_coding protein_coding MGP_BALBcJ_T0086503.1 MGP_BALBcJ_G0032968.1 mouse_genomes_project 7 126922923 126940553 - MGP_BALBcJ_P0086503 Atp2a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0083844.1 MGP_BALBcJ_G0032213.1 mouse_genomes_project 7 44810493 44832377 + MGP_BALBcJ_P0083844 Gys1 protein_coding protein_coding MGP_BALBcJ_T0083845.1 MGP_BALBcJ_G0032213.1 mouse_genomes_project 7 44810526 44831588 + MGP_BALBcJ_P0083845 Gys1 protein_coding protein_coding MGP_BALBcJ_T0083846.1 MGP_BALBcJ_G0032213.1 mouse_genomes_project 7 44823277 44827500 + Gys1 protein_coding processed_transcript MGP_BALBcJ_T0083847.1 MGP_BALBcJ_G0032213.1 mouse_genomes_project 7 44823403 44827524 + Gys1 protein_coding processed_transcript MGP_BALBcJ_T0083848.1 MGP_BALBcJ_G0032213.1 mouse_genomes_project 7 44823926 44831080 + Gys1 protein_coding retained_intron MGP_BALBcJ_T0083849.1 MGP_BALBcJ_G0032213.1 mouse_genomes_project 7 44826697 44827789 + Gys1 protein_coding retained_intron MGP_BALBcJ_T0087170.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131975170 131985897 + MGP_BALBcJ_P0087170 Pstk protein_coding protein_coding MGP_BALBcJ_T0087171.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131975175 131985894 + MGP_BALBcJ_P0087171 Pstk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087172.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131975186 131978293 + Pstk protein_coding processed_transcript MGP_BALBcJ_T0087173.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131977064 131985891 + Pstk protein_coding retained_intron MGP_BALBcJ_T0087174.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131981982 131985894 + Pstk protein_coding processed_transcript MGP_BALBcJ_T0087175.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131982314 131985785 + Pstk protein_coding retained_intron MGP_BALBcJ_T0087176.1 MGP_BALBcJ_G0033086.1 mouse_genomes_project 7 131982555 131985890 + Pstk protein_coding processed_transcript MGP_BALBcJ_T0084538.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78834787 78844764 - Mfge8 protein_coding retained_intron MGP_BALBcJ_T0084539.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78834787 78850064 - MGP_BALBcJ_P0084539 Mfge8 protein_coding protein_coding MGP_BALBcJ_T0084540.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78834788 78850071 - MGP_BALBcJ_P0084540 Mfge8 protein_coding protein_coding MGP_BALBcJ_T0084541.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78835135 78850042 - MGP_BALBcJ_P0084541 Mfge8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084542.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78835158 78838011 - Mfge8 protein_coding retained_intron MGP_BALBcJ_T0084543.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78837518 78843785 - Mfge8 protein_coding retained_intron MGP_BALBcJ_T0084544.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78842855 78844028 - Mfge8 protein_coding retained_intron MGP_BALBcJ_T0084545.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78843846 78848537 - Mfge8 protein_coding processed_transcript MGP_BALBcJ_T0084546.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78845898 78850000 - Mfge8 protein_coding retained_intron MGP_BALBcJ_T0084547.1 MGP_BALBcJ_G0032376.1 mouse_genomes_project 7 78846312 78849206 - Mfge8 protein_coding processed_transcript MGP_BALBcJ_T0102788.1 MGP_BALBcJ_G0040603.1 mouse_genomes_project 7 85234727 85237424 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083213.1 MGP_BALBcJ_G0032052.1 mouse_genomes_project 7 32335131 32337463 - MGP_BALBcJ_P0083213 Scgb2b24 protein_coding protein_coding MGP_BALBcJ_T0087198.1 MGP_BALBcJ_G0033094.1 mouse_genomes_project 7 132832967 132916652 - MGP_BALBcJ_P0087198 Chst15 protein_coding protein_coding MGP_BALBcJ_T0087199.1 MGP_BALBcJ_G0033094.1 mouse_genomes_project 7 132832967 132916138 - MGP_BALBcJ_P0087199 Chst15 protein_coding protein_coding MGP_BALBcJ_T0087200.1 MGP_BALBcJ_G0033094.1 mouse_genomes_project 7 132869279 132877117 - Chst15 protein_coding processed_transcript MGP_BALBcJ_T0082107.1 MGP_BALBcJ_G0031781.1 mouse_genomes_project 7 17739962 17753011 - MGP_BALBcJ_P0082107 Ceacam19 protein_coding protein_coding MGP_BALBcJ_T0082239.1 MGP_BALBcJ_G0031830.1 mouse_genomes_project 7 22869639 23638052 - MGP_BALBcJ_P0082239 protein_coding protein_coding MGP_BALBcJ_T0082240.1 MGP_BALBcJ_G0031830.1 mouse_genomes_project 7 22869639 23638052 - MGP_BALBcJ_P0082240 protein_coding protein_coding MGP_BALBcJ_T0082241.1 MGP_BALBcJ_G0031830.1 mouse_genomes_project 7 22870437 23638052 - MGP_BALBcJ_P0082241 protein_coding protein_coding MGP_BALBcJ_T0082359.1 MGP_BALBcJ_G0031830.1 mouse_genomes_project 7 23601244 23636142 - protein_coding processed_transcript MGP_BALBcJ_T0082461.1 MGP_BALBcJ_G0031881.1 mouse_genomes_project 7 25395050 25403193 - MGP_BALBcJ_P0082461 Egln2 protein_coding protein_coding MGP_BALBcJ_T0082462.1 MGP_BALBcJ_G0031881.1 mouse_genomes_project 7 25395051 25397263 - Egln2 protein_coding processed_transcript MGP_BALBcJ_T0082463.1 MGP_BALBcJ_G0031881.1 mouse_genomes_project 7 25395380 25402804 - MGP_BALBcJ_P0082463 Egln2 protein_coding protein_coding MGP_BALBcJ_T0082464.1 MGP_BALBcJ_G0031881.1 mouse_genomes_project 7 25401923 25402673 - Egln2 protein_coding processed_transcript MGP_BALBcJ_T0087608.1 MGP_BALBcJ_G0033210.1 mouse_genomes_project 7 142147520 142153476 - Pddc1 protein_coding retained_intron MGP_BALBcJ_T0087609.1 MGP_BALBcJ_G0033210.1 mouse_genomes_project 7 142147569 142148717 - Pddc1 protein_coding retained_intron MGP_BALBcJ_T0087610.1 MGP_BALBcJ_G0033210.1 mouse_genomes_project 7 142147569 142153522 - MGP_BALBcJ_P0087610 Pddc1 protein_coding protein_coding MGP_BALBcJ_T0087611.1 MGP_BALBcJ_G0033210.1 mouse_genomes_project 7 142147571 142153464 - Pddc1 protein_coding retained_intron MGP_BALBcJ_T0087612.1 MGP_BALBcJ_G0033210.1 mouse_genomes_project 7 142150229 142153451 - Pddc1 protein_coding retained_intron MGP_BALBcJ_T0087613.1 MGP_BALBcJ_G0033210.1 mouse_genomes_project 7 142150936 142153462 - Pddc1 protein_coding retained_intron MGP_BALBcJ_T0084780.1 MGP_BALBcJ_G0032415.1 mouse_genomes_project 7 80790904 80839225 + MGP_BALBcJ_P0084780 Alpk3 protein_coding unknown_likely_coding MGP_BALBcJ_T0084781.1 MGP_BALBcJ_G0032415.1 mouse_genomes_project 7 80829398 80830261 + Alpk3 protein_coding retained_intron MGP_BALBcJ_T0085759.1 MGP_BALBcJ_G0032757.1 mouse_genomes_project 7 107023166 107025780 - MGP_BALBcJ_P0085759 protein_coding protein_coding MGP_BALBcJ_T0008799.1 MGP_BALBcJ_G0007104.1 mouse_genomes_project 7 23693037 23706872 + Gm44880 lincRNA lincRNA MGP_BALBcJ_T0010854.1 MGP_BALBcJ_G0008979.1 mouse_genomes_project 7 53620713 53620821 - Gm27921 miRNA miRNA MGP_BALBcJ_T0086289.1 MGP_BALBcJ_G0032928.1 mouse_genomes_project 7 121537148 121547923 - MGP_BALBcJ_P0086289 Igsf6 protein_coding protein_coding MGP_BALBcJ_T0002238.1 MGP_BALBcJ_G0002150.1 mouse_genomes_project 7 63822408 63822848 + TEC TEC MGP_BALBcJ_T0005294.1 MGP_BALBcJ_G0004490.1 mouse_genomes_project 7 143971894 144061794 - Kcnq1ot1 antisense antisense MGP_BALBcJ_T0082523.1 MGP_BALBcJ_G0031893.1 mouse_genomes_project 7 25591488 25596225 - MGP_BALBcJ_P0082523 Gm20479 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102724.1 MGP_BALBcJ_G0040539.1 mouse_genomes_project 7 29711923 29714109 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085782.1 MGP_BALBcJ_G0032779.1 mouse_genomes_project 7 107443960 107445064 + MGP_BALBcJ_P0085782 Olfr716 protein_coding protein_coding MGP_BALBcJ_T0084607.1 MGP_BALBcJ_G0032386.1 mouse_genomes_project 7 79452384 79497345 + MGP_BALBcJ_P0084607 Wdr93 protein_coding protein_coding MGP_BALBcJ_T0085663.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682467 105705961 - MGP_BALBcJ_P0085663 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085664.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682468 105692716 - MGP_BALBcJ_P0085664 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085665.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682468 105693236 - MGP_BALBcJ_P0085665 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085666.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682468 105693452 - MGP_BALBcJ_P0085666 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085667.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682468 105705586 - MGP_BALBcJ_P0085667 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085668.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682470 105705545 - MGP_BALBcJ_P0085668 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085669.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682471 105692895 - Apbb1 protein_coding retained_intron MGP_BALBcJ_T0085670.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682487 105705799 - MGP_BALBcJ_P0085670 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085671.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682507 105693231 - MGP_BALBcJ_P0085671 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085672.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105682802 105692716 - MGP_BALBcJ_P0085672 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085673.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105683145 105689444 - Apbb1 protein_coding retained_intron MGP_BALBcJ_T0085674.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105683452 105691233 - Apbb1 protein_coding retained_intron MGP_BALBcJ_T0085675.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105689528 105705500 - MGP_BALBcJ_P0085675 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085676.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105690045 105692902 - MGP_BALBcJ_P0085676 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085677.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105690488 105693204 - MGP_BALBcJ_P0085677 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085678.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105690603 105693212 - MGP_BALBcJ_P0085678 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085679.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105691032 105693531 - MGP_BALBcJ_P0085679 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085680.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105691106 105692609 - Apbb1 protein_coding retained_intron MGP_BALBcJ_T0085681.1 MGP_BALBcJ_G0032741.1 mouse_genomes_project 7 105697860 105705496 - MGP_BALBcJ_P0085681 Apbb1 protein_coding protein_coding MGP_BALBcJ_T0085266.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100513258 100551226 - MGP_BALBcJ_P0085266 protein_coding protein_coding MGP_BALBcJ_T0085267.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100513263 100515128 - MGP_BALBcJ_P0085267 protein_coding protein_coding MGP_BALBcJ_T0085268.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100516738 100542808 - protein_coding processed_transcript MGP_BALBcJ_T0085269.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100518110 100559566 - protein_coding processed_transcript MGP_BALBcJ_T0085270.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100520085 100576238 - protein_coding processed_transcript MGP_BALBcJ_T0085271.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100527431 100551234 - protein_coding processed_transcript MGP_BALBcJ_T0085272.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100533475 100551199 - MGP_BALBcJ_P0085272 protein_coding protein_coding MGP_BALBcJ_T0085273.1 MGP_BALBcJ_G0032558.1 mouse_genomes_project 7 100533490 100575935 - protein_coding processed_transcript MGP_BALBcJ_T0002205.1 MGP_BALBcJ_G0002117.1 mouse_genomes_project 7 35500769 35504754 + TEC TEC MGP_BALBcJ_T0101329.1 MGP_BALBcJ_G0039365.1 mouse_genomes_project 7 59154874 59154953 - snoRNA snoRNA MGP_BALBcJ_T0018294.1 MGP_BALBcJ_G0015595.1 mouse_genomes_project 7 22856854 22880883 + Gm5893 processed_transcript lincRNA MGP_BALBcJ_T0018295.1 MGP_BALBcJ_G0015595.1 mouse_genomes_project 7 22856854 22880866 + Gm5893 processed_transcript processed_transcript MGP_BALBcJ_T0018296.1 MGP_BALBcJ_G0015595.1 mouse_genomes_project 7 22860168 22863932 + Gm5893 processed_transcript retained_intron MGP_BALBcJ_T0011674.1 MGP_BALBcJ_G0009799.1 mouse_genomes_project 7 115355410 115355728 + Gm22669 misc_RNA misc_RNA MGP_BALBcJ_T0008897.1 MGP_BALBcJ_G0007183.1 mouse_genomes_project 7 72935326 72940134 + 4930429H19Rik lincRNA lincRNA MGP_BALBcJ_T0008898.1 MGP_BALBcJ_G0007183.1 mouse_genomes_project 7 72935476 72936901 + 4930429H19Rik lincRNA lincRNA MGP_BALBcJ_T0018399.1 MGP_BALBcJ_G0015640.1 mouse_genomes_project 7 142659759 142660555 - processed_transcript processed_transcript MGP_BALBcJ_T0102711.1 MGP_BALBcJ_G0040526.1 mouse_genomes_project 7 14575543 14575904 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010806.1 MGP_BALBcJ_G0008931.1 mouse_genomes_project 7 118392 118474 + Mir291a miRNA miRNA MGP_BALBcJ_T0005240.1 MGP_BALBcJ_G0004452.1 mouse_genomes_project 7 99599880 99605455 + Gm15635 antisense antisense MGP_BALBcJ_T0005241.1 MGP_BALBcJ_G0004452.1 mouse_genomes_project 7 99603538 99605366 + Gm15635 antisense antisense MGP_BALBcJ_T0005242.1 MGP_BALBcJ_G0004452.1 mouse_genomes_project 7 99603590 99605828 + Gm15635 antisense antisense MGP_BALBcJ_T0087274.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134350800 134408137 - MGP_BALBcJ_P0087274 Dhx32 protein_coding protein_coding MGP_BALBcJ_T0087275.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134350804 134391616 - Dhx32 protein_coding processed_transcript MGP_BALBcJ_T0087276.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134350968 134414757 - MGP_BALBcJ_P0087276 Dhx32 protein_coding protein_coding MGP_BALBcJ_T0087277.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134351086 134408072 - MGP_BALBcJ_P0087277 Dhx32 protein_coding protein_coding MGP_BALBcJ_T0087278.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134352902 134361075 - Dhx32 protein_coding processed_transcript MGP_BALBcJ_T0087279.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134379969 134390819 - Dhx32 protein_coding processed_transcript MGP_BALBcJ_T0087280.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134380269 134391176 - MGP_BALBcJ_P0087280 Dhx32 protein_coding protein_coding MGP_BALBcJ_T0087281.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134380414 134408021 - MGP_BALBcJ_P0087281 Dhx32 protein_coding protein_coding MGP_BALBcJ_T0087282.1 MGP_BALBcJ_G0033108.1 mouse_genomes_project 7 134391024 134407843 - MGP_BALBcJ_P0087282 Dhx32 protein_coding protein_coding MGP_BALBcJ_T0002204.1 MGP_BALBcJ_G0002116.1 mouse_genomes_project 7 35488563 35489721 + TEC TEC MGP_BALBcJ_T0082382.1 MGP_BALBcJ_G0031858.1 mouse_genomes_project 7 23782699 23788719 - MGP_BALBcJ_P0082382 Tmem91 protein_coding protein_coding MGP_BALBcJ_T0082383.1 MGP_BALBcJ_G0031858.1 mouse_genomes_project 7 23782702 23787026 - MGP_BALBcJ_P0082383 Tmem91 protein_coding protein_coding MGP_BALBcJ_T0082384.1 MGP_BALBcJ_G0031858.1 mouse_genomes_project 7 23782802 23788643 - MGP_BALBcJ_P0082384 Tmem91 protein_coding protein_coding MGP_BALBcJ_T0082385.1 MGP_BALBcJ_G0031858.1 mouse_genomes_project 7 23782802 23788600 - MGP_BALBcJ_P0082385 Tmem91 protein_coding protein_coding MGP_BALBcJ_T0082386.1 MGP_BALBcJ_G0031858.1 mouse_genomes_project 7 23783604 23788672 - Tmem91 protein_coding retained_intron MGP_BALBcJ_T0082387.1 MGP_BALBcJ_G0031858.1 mouse_genomes_project 7 23784749 23788671 - Tmem91 protein_coding retained_intron MGP_BALBcJ_T0082841.1 MGP_BALBcJ_G0031974.1 mouse_genomes_project 7 28232934 28247860 + MGP_BALBcJ_P0082841 Zfp420 protein_coding protein_coding MGP_BALBcJ_T0082842.1 MGP_BALBcJ_G0031974.1 mouse_genomes_project 7 28232959 28234563 + Zfp420 protein_coding retained_intron MGP_BALBcJ_T0082843.1 MGP_BALBcJ_G0031974.1 mouse_genomes_project 7 28232966 28248641 + Zfp420 protein_coding processed_transcript MGP_BALBcJ_T0082844.1 MGP_BALBcJ_G0031974.1 mouse_genomes_project 7 28232996 28248182 + MGP_BALBcJ_P0082844 Zfp420 protein_coding protein_coding MGP_BALBcJ_T0082845.1 MGP_BALBcJ_G0031974.1 mouse_genomes_project 7 28243897 28245891 + Zfp420 protein_coding retained_intron MGP_BALBcJ_T0002278.1 MGP_BALBcJ_G0002189.1 mouse_genomes_project 7 79927347 79929631 + TEC TEC MGP_BALBcJ_T0086125.1 MGP_BALBcJ_G0032884.1 mouse_genomes_project 7 118589340 118708470 - MGP_BALBcJ_P0086125 Smg1 protein_coding protein_coding MGP_BALBcJ_T0086126.1 MGP_BALBcJ_G0032884.1 mouse_genomes_project 7 118595294 118682307 - MGP_BALBcJ_P0086126 Smg1 protein_coding protein_coding MGP_BALBcJ_T0086127.1 MGP_BALBcJ_G0032884.1 mouse_genomes_project 7 118601720 118602735 - MGP_BALBcJ_P0086127 Smg1 protein_coding protein_coding MGP_BALBcJ_T0086128.1 MGP_BALBcJ_G0032884.1 mouse_genomes_project 7 118660865 118708470 - Smg1 protein_coding retained_intron MGP_BALBcJ_T0086129.1 MGP_BALBcJ_G0032884.1 mouse_genomes_project 7 118665550 118708460 - MGP_BALBcJ_P0086129 Smg1 protein_coding protein_coding MGP_BALBcJ_T0086130.1 MGP_BALBcJ_G0032884.1 mouse_genomes_project 7 118668369 118708182 - Smg1 protein_coding retained_intron MGP_BALBcJ_T0084249.1 MGP_BALBcJ_G0032322.1 mouse_genomes_project 7 62998393 63371804 + MGP_BALBcJ_P0084249 Otud7a protein_coding protein_coding MGP_BALBcJ_T0084250.1 MGP_BALBcJ_G0032322.1 mouse_genomes_project 7 62998419 63232171 + Otud7a protein_coding processed_transcript MGP_BALBcJ_T0084251.1 MGP_BALBcJ_G0032322.1 mouse_genomes_project 7 63265438 63370765 + MGP_BALBcJ_P0084251 Otud7a protein_coding protein_coding MGP_BALBcJ_T0084252.1 MGP_BALBcJ_G0032322.1 mouse_genomes_project 7 63299113 63371507 + MGP_BALBcJ_P0084252 Otud7a protein_coding unknown_likely_coding MGP_BALBcJ_T0084253.1 MGP_BALBcJ_G0032322.1 mouse_genomes_project 7 63367487 63370701 + MGP_BALBcJ_P0084253 Otud7a protein_coding protein_coding MGP_BALBcJ_T0083546.1 MGP_BALBcJ_G0032139.1 mouse_genomes_project 7 43273635 43326579 + MGP_BALBcJ_P0083546 protein_coding protein_coding MGP_BALBcJ_T0083547.1 MGP_BALBcJ_G0032139.1 mouse_genomes_project 7 43273711 43326128 + protein_coding retained_intron MGP_BALBcJ_T0083548.1 MGP_BALBcJ_G0032139.1 mouse_genomes_project 7 43273716 43326504 + MGP_BALBcJ_P0083548 protein_coding protein_coding MGP_BALBcJ_T0085496.1 MGP_BALBcJ_G0032617.1 mouse_genomes_project 7 102951396 102952347 + MGP_BALBcJ_P0085496 Olfr568 protein_coding protein_coding MGP_BALBcJ_T0086303.1 MGP_BALBcJ_G0032934.1 mouse_genomes_project 7 122365289 122368065 - Cog7 protein_coding retained_intron MGP_BALBcJ_T0086304.1 MGP_BALBcJ_G0032934.1 mouse_genomes_project 7 122365580 122467739 - MGP_BALBcJ_P0086304 Cog7 protein_coding protein_coding MGP_BALBcJ_T0086306.1 MGP_BALBcJ_G0032934.1 mouse_genomes_project 7 122408778 122467739 - MGP_BALBcJ_P0086306 Cog7 protein_coding protein_coding MGP_BALBcJ_T0086307.1 MGP_BALBcJ_G0032934.1 mouse_genomes_project 7 122415212 122467722 - Cog7 protein_coding retained_intron MGP_BALBcJ_T0086298.1 MGP_BALBcJ_G0032931.1 mouse_genomes_project 7 122125103 122191170 - MGP_BALBcJ_P0086298 Usp31 protein_coding protein_coding MGP_BALBcJ_T0086299.1 MGP_BALBcJ_G0032931.1 mouse_genomes_project 7 122141864 122149478 - Usp31 protein_coding retained_intron MGP_BALBcJ_T0101335.1 MGP_BALBcJ_G0039371.1 mouse_genomes_project 7 68563535 68563672 - Gm23795 snoRNA snoRNA MGP_BALBcJ_T0015790.1 MGP_BALBcJ_G0013887.1 mouse_genomes_project 7 56335090 56335949 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082754.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463129 27485034 + MGP_BALBcJ_P0082754 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082755.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463129 27485034 + MGP_BALBcJ_P0082755 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082756.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463129 27485034 + MGP_BALBcJ_P0082756 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082757.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463129 27485034 + MGP_BALBcJ_P0082757 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082758.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463129 27485034 + MGP_BALBcJ_P0082758 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082759.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463129 27485034 + MGP_BALBcJ_P0082759 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082760.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463211 27481800 + Rasgrp4 protein_coding retained_intron MGP_BALBcJ_T0082761.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463211 27486428 + MGP_BALBcJ_P0082761 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082762.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463211 27486449 + MGP_BALBcJ_P0082762 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082763.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463211 27484115 + MGP_BALBcJ_P0082763 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082764.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463260 27483472 + Rasgrp4 protein_coding retained_intron MGP_BALBcJ_T0082765.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27463284 27481043 + MGP_BALBcJ_P0082765 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0082766.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27468049 27484000 + MGP_BALBcJ_P0082766 Rasgrp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082767.1 MGP_BALBcJ_G0031956.1 mouse_genomes_project 7 27482680 27484115 + MGP_BALBcJ_P0082767 Rasgrp4 protein_coding protein_coding MGP_BALBcJ_T0015843.1 MGP_BALBcJ_G0013940.1 mouse_genomes_project 7 96342254 96342726 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002224.1 MGP_BALBcJ_G0002136.1 mouse_genomes_project 7 54477575 54479113 + TEC TEC MGP_BALBcJ_T0005168.1 MGP_BALBcJ_G0004402.1 mouse_genomes_project 7 29574617 29577793 + G630030J09Rik antisense antisense MGP_BALBcJ_T0008797.1 MGP_BALBcJ_G0007103.1 mouse_genomes_project 7 23683009 23686613 - lincRNA lincRNA MGP_BALBcJ_T0008798.1 MGP_BALBcJ_G0007103.1 mouse_genomes_project 7 23683010 23686613 - lincRNA lincRNA MGP_BALBcJ_T0015732.1 MGP_BALBcJ_G0013829.1 mouse_genomes_project 7 24226654 24227408 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081245.1 MGP_BALBcJ_G0031509.1 mouse_genomes_project 7 537853 544678 - MGP_BALBcJ_P0081245 Leng1 protein_coding protein_coding MGP_BALBcJ_T0015722.1 MGP_BALBcJ_G0013819.1 mouse_genomes_project 7 22726579 22726782 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083208.1 MGP_BALBcJ_G0032048.1 mouse_genomes_project 7 29727073 29740207 + MGP_BALBcJ_P0083208 Scgb2b2 protein_coding protein_coding MGP_BALBcJ_T0083210.1 MGP_BALBcJ_G0032048.1 mouse_genomes_project 7 29738002 29740207 + MGP_BALBcJ_P0083210 Scgb2b2 protein_coding protein_coding MGP_BALBcJ_T0002195.1 MGP_BALBcJ_G0002107.1 mouse_genomes_project 7 16821875 16825099 - TEC TEC MGP_BALBcJ_T0083744.1 MGP_BALBcJ_G0032182.1 mouse_genomes_project 7 44357149 44363515 - MGP_BALBcJ_P0083744 Bcl2l12 protein_coding protein_coding MGP_BALBcJ_T0002221.1 MGP_BALBcJ_G0002133.1 mouse_genomes_project 7 45762298 45762814 + TEC TEC MGP_BALBcJ_T0005177.1 MGP_BALBcJ_G0004409.1 mouse_genomes_project 7 34309569 34311138 + B230322F03Rik antisense antisense MGP_BALBcJ_T0084848.1 MGP_BALBcJ_G0032434.1 mouse_genomes_project 7 82387252 82403649 - MGP_BALBcJ_P0084848 Saxo2 protein_coding protein_coding MGP_BALBcJ_T0084849.1 MGP_BALBcJ_G0032434.1 mouse_genomes_project 7 82388789 82403555 - MGP_BALBcJ_P0084849 Saxo2 protein_coding unknown_likely_coding MGP_BALBcJ_T0084850.1 MGP_BALBcJ_G0032434.1 mouse_genomes_project 7 82389613 82403649 - Saxo2 protein_coding processed_transcript MGP_BALBcJ_T0084851.1 MGP_BALBcJ_G0032434.1 mouse_genomes_project 7 82396445 82403654 - Saxo2 protein_coding retained_intron MGP_BALBcJ_T0084852.1 MGP_BALBcJ_G0032434.1 mouse_genomes_project 7 82400472 82403654 - Saxo2 protein_coding processed_transcript MGP_BALBcJ_T0086514.1 MGP_BALBcJ_G0032971.1 mouse_genomes_project 7 126964550 126968582 + MGP_BALBcJ_P0086514 protein_coding protein_coding MGP_BALBcJ_T0085897.1 MGP_BALBcJ_G0032841.1 mouse_genomes_project 7 110404453 110407792 - MGP_BALBcJ_P0085897 protein_coding protein_coding MGP_BALBcJ_T0085764.1 MGP_BALBcJ_G0032762.1 mouse_genomes_project 7 107133907 107140458 + MGP_BALBcJ_P0085764 Olfr701 protein_coding protein_coding MGP_BALBcJ_T0085765.1 MGP_BALBcJ_G0032762.1 mouse_genomes_project 7 107133942 107138895 + MGP_BALBcJ_P0085765 Olfr701 protein_coding protein_coding MGP_BALBcJ_T0084142.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51444867 51587017 + MGP_BALBcJ_P0084142 Gas2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084143.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51445279 51557691 + MGP_BALBcJ_P0084143 Gas2 protein_coding protein_coding MGP_BALBcJ_T0084144.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51446769 51447263 + Gas2 protein_coding retained_intron MGP_BALBcJ_T0084145.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51466696 51535434 + MGP_BALBcJ_P0084145 Gas2 protein_coding protein_coding MGP_BALBcJ_T0084146.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51467509 51535598 + MGP_BALBcJ_P0084146 Gas2 protein_coding unknown_likely_coding MGP_BALBcJ_T0084147.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51467509 51585553 + MGP_BALBcJ_P0084147 Gas2 protein_coding unknown_likely_coding MGP_BALBcJ_T0084148.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51516967 51535472 + Gas2 protein_coding processed_transcript MGP_BALBcJ_T0084149.1 MGP_BALBcJ_G0032298.1 mouse_genomes_project 7 51535388 51548138 + Gas2 protein_coding processed_transcript MGP_BALBcJ_T0015716.1 MGP_BALBcJ_G0013813.1 mouse_genomes_project 7 16652355 16652925 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002266.1 MGP_BALBcJ_G0002177.1 mouse_genomes_project 7 78622120 78623753 - TEC TEC MGP_BALBcJ_T0082193.1 MGP_BALBcJ_G0031814.1 mouse_genomes_project 7 22478426 22492464 + MGP_BALBcJ_P0082193 Plaur protein_coding protein_coding MGP_BALBcJ_T0082194.1 MGP_BALBcJ_G0031814.1 mouse_genomes_project 7 22478427 22481343 + Plaur protein_coding retained_intron MGP_BALBcJ_T0082195.1 MGP_BALBcJ_G0031814.1 mouse_genomes_project 7 22478437 22489464 + Plaur protein_coding retained_intron MGP_BALBcJ_T0082196.1 MGP_BALBcJ_G0031814.1 mouse_genomes_project 7 22478442 22492465 + Plaur protein_coding retained_intron MGP_BALBcJ_T0082197.1 MGP_BALBcJ_G0031814.1 mouse_genomes_project 7 22478442 22492212 + MGP_BALBcJ_P0082197 Plaur protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082198.1 MGP_BALBcJ_G0031814.1 mouse_genomes_project 7 22478442 22488497 + MGP_BALBcJ_P0082198 Plaur protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085869.1 MGP_BALBcJ_G0032833.1 mouse_genomes_project 7 110056074 110067859 - MGP_BALBcJ_P0085869 BC051019 protein_coding protein_coding MGP_BALBcJ_T0085870.1 MGP_BALBcJ_G0032833.1 mouse_genomes_project 7 110056077 110067923 - MGP_BALBcJ_P0085870 BC051019 protein_coding protein_coding MGP_BALBcJ_T0085871.1 MGP_BALBcJ_G0032833.1 mouse_genomes_project 7 110059801 110064872 - MGP_BALBcJ_P0085871 BC051019 protein_coding protein_coding MGP_BALBcJ_T0084078.1 MGP_BALBcJ_G0032274.1 mouse_genomes_project 7 46663398 46664444 - MGP_BALBcJ_P0084078 Mrgpra9 protein_coding protein_coding MGP_BALBcJ_T0083912.1 MGP_BALBcJ_G0032228.1 mouse_genomes_project 7 45036292 45055628 - MGP_BALBcJ_P0083912 Fut2 protein_coding protein_coding MGP_BALBcJ_T0083691.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44178421 44193034 + MGP_BALBcJ_P0083691 Il4i1 protein_coding protein_coding MGP_BALBcJ_T0083692.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44178703 44204126 + MGP_BALBcJ_P0083692 Il4i1 protein_coding protein_coding MGP_BALBcJ_T0083693.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44178720 44195175 + Il4i1 protein_coding processed_transcript MGP_BALBcJ_T0083694.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44199608 44204131 + MGP_BALBcJ_P0083694 Il4i1 protein_coding protein_coding MGP_BALBcJ_T0083695.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44199612 44201618 + Il4i1 protein_coding retained_intron MGP_BALBcJ_T0083696.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44202012 44203103 + Il4i1 protein_coding retained_intron MGP_BALBcJ_T0083697.1 MGP_BALBcJ_G0032170.1 mouse_genomes_project 7 44202519 44203090 + MGP_BALBcJ_P0083697 Il4i1 protein_coding protein_coding MGP_BALBcJ_T0085492.1 MGP_BALBcJ_G0032614.1 mouse_genomes_project 7 102803164 102822584 - MGP_BALBcJ_P0085492 Olfr78 protein_coding protein_coding MGP_BALBcJ_T0085493.1 MGP_BALBcJ_G0032614.1 mouse_genomes_project 7 102803164 102822584 - MGP_BALBcJ_P0085493 Olfr78 protein_coding protein_coding MGP_BALBcJ_T0084834.1 MGP_BALBcJ_G0032431.1 mouse_genomes_project 7 81727747 81753365 - MGP_BALBcJ_P0084834 Bnc1 protein_coding protein_coding MGP_BALBcJ_T0085532.1 MGP_BALBcJ_G0032651.1 mouse_genomes_project 7 103672445 103673417 - MGP_BALBcJ_P0085532 Olfr612 protein_coding protein_coding MGP_BALBcJ_T0008883.1 MGP_BALBcJ_G0007170.1 mouse_genomes_project 7 70967489 71007869 + Gm29295 lincRNA lincRNA MGP_BALBcJ_T0101330.1 MGP_BALBcJ_G0039366.1 mouse_genomes_project 7 59231222 59231311 - Gm22373 snoRNA snoRNA MGP_BALBcJ_T0086677.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127351309 127354715 + MGP_BALBcJ_P0086677 Hirip3 protein_coding protein_coding MGP_BALBcJ_T0086678.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127351776 127352742 + Hirip3 protein_coding retained_intron MGP_BALBcJ_T0086679.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127351801 127353063 + Hirip3 protein_coding retained_intron MGP_BALBcJ_T0086680.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127351804 127353509 + Hirip3 protein_coding processed_transcript MGP_BALBcJ_T0086681.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127351818 127352769 + MGP_BALBcJ_P0086681 Hirip3 protein_coding protein_coding MGP_BALBcJ_T0086682.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127353180 127353866 + Hirip3 protein_coding retained_intron MGP_BALBcJ_T0086683.1 MGP_BALBcJ_G0032993.1 mouse_genomes_project 7 127353753 127354256 + Hirip3 protein_coding retained_intron MGP_BALBcJ_T0087729.1 MGP_BALBcJ_G0033227.1 mouse_genomes_project 7 142722939 142777524 - MGP_BALBcJ_P0087729 Mob2 protein_coding protein_coding MGP_BALBcJ_T0087500.1 MGP_BALBcJ_G0033184.1 mouse_genomes_project 7 141653014 141659280 + MGP_BALBcJ_P0087500 Athl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087501.1 MGP_BALBcJ_G0033184.1 mouse_genomes_project 7 141653189 141659282 + Athl1 protein_coding retained_intron MGP_BALBcJ_T0087502.1 MGP_BALBcJ_G0033184.1 mouse_genomes_project 7 141653194 141654736 + Athl1 protein_coding processed_transcript MGP_BALBcJ_T0087503.1 MGP_BALBcJ_G0033184.1 mouse_genomes_project 7 141653204 141659288 + MGP_BALBcJ_P0087503 Athl1 protein_coding protein_coding MGP_BALBcJ_T0087504.1 MGP_BALBcJ_G0033184.1 mouse_genomes_project 7 141653933 141658468 + MGP_BALBcJ_P0087504 Athl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087505.1 MGP_BALBcJ_G0033184.1 mouse_genomes_project 7 141654159 141659284 + MGP_BALBcJ_P0087505 Athl1 protein_coding protein_coding MGP_BALBcJ_T0010841.1 MGP_BALBcJ_G0008966.1 mouse_genomes_project 7 29463759 29463819 - Mir7050 miRNA miRNA MGP_BALBcJ_T0083435.1 MGP_BALBcJ_G0032099.1 mouse_genomes_project 7 40675812 40712429 + MGP_BALBcJ_P0083435 protein_coding protein_coding MGP_BALBcJ_T0083436.1 MGP_BALBcJ_G0032099.1 mouse_genomes_project 7 40675827 40698027 + protein_coding retained_intron MGP_BALBcJ_T0083437.1 MGP_BALBcJ_G0032099.1 mouse_genomes_project 7 40712250 40713203 + protein_coding retained_intron MGP_BALBcJ_T0085632.1 MGP_BALBcJ_G0032718.1 mouse_genomes_project 7 105000654 105001608 + MGP_BALBcJ_P0085632 Olfr669 protein_coding protein_coding MGP_BALBcJ_T0086870.1 MGP_BALBcJ_G0033030.1 mouse_genomes_project 7 128087242 128103274 + MGP_BALBcJ_P0086870 Rnf40 protein_coding protein_coding MGP_BALBcJ_T0086871.1 MGP_BALBcJ_G0033030.1 mouse_genomes_project 7 128087394 128102069 + MGP_BALBcJ_P0086871 Rnf40 protein_coding protein_coding MGP_BALBcJ_T0086872.1 MGP_BALBcJ_G0033030.1 mouse_genomes_project 7 128087394 128102060 + MGP_BALBcJ_P0086872 Rnf40 protein_coding protein_coding MGP_BALBcJ_T0086873.1 MGP_BALBcJ_G0033030.1 mouse_genomes_project 7 128090890 128093202 + Rnf40 protein_coding retained_intron MGP_BALBcJ_T0086874.1 MGP_BALBcJ_G0033030.1 mouse_genomes_project 7 128091351 128094708 + Rnf40 protein_coding retained_intron MGP_BALBcJ_T0086875.1 MGP_BALBcJ_G0033030.1 mouse_genomes_project 7 128095288 128099078 + Rnf40 protein_coding retained_intron MGP_BALBcJ_T0100060.1 MGP_BALBcJ_G0038096.1 mouse_genomes_project 7 38578398 38578509 + Gm26327 snRNA snRNA MGP_BALBcJ_T0098647.1 MGP_BALBcJ_G0036701.1 mouse_genomes_project 7 90131292 90131405 + n-R5s155 rRNA rRNA MGP_BALBcJ_T0100054.1 MGP_BALBcJ_G0038090.1 mouse_genomes_project 7 17085936 17086096 + Gm25134 snRNA snRNA MGP_BALBcJ_T0086966.1 MGP_BALBcJ_G0033049.1 mouse_genomes_project 7 128427403 128431791 - MGP_BALBcJ_P0086966 Prss8 protein_coding protein_coding MGP_BALBcJ_T0086967.1 MGP_BALBcJ_G0033049.1 mouse_genomes_project 7 128427403 128431791 - MGP_BALBcJ_P0086967 Prss8 protein_coding protein_coding MGP_BALBcJ_T0086968.1 MGP_BALBcJ_G0033049.1 mouse_genomes_project 7 128428449 128431782 - MGP_BALBcJ_P0086968 Prss8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015694.1 MGP_BALBcJ_G0013791.1 mouse_genomes_project 7 11194610 11196200 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005127.1 MGP_BALBcJ_G0004372.1 mouse_genomes_project 7 14198940 14218385 + Gm29443 antisense antisense MGP_BALBcJ_T0005128.1 MGP_BALBcJ_G0004372.1 mouse_genomes_project 7 14199156 14218484 + Gm29443 antisense antisense MGP_BALBcJ_T0084808.1 MGP_BALBcJ_G0032422.1 mouse_genomes_project 7 81281113 81315402 - MGP_BALBcJ_P0084808 Fsd2 protein_coding protein_coding MGP_BALBcJ_T0087512.1 MGP_BALBcJ_G0033189.1 mouse_genomes_project 7 141740772 141741853 - MGP_BALBcJ_P0087512 Ifitm6 protein_coding protein_coding MGP_BALBcJ_T0100088.1 MGP_BALBcJ_G0038124.1 mouse_genomes_project 7 110118955 110119062 - Gm22822 snRNA snRNA MGP_BALBcJ_T0101338.1 MGP_BALBcJ_G0039374.1 mouse_genomes_project 7 82753806 82753938 + Gm22934 snoRNA snoRNA MGP_BALBcJ_T0102780.1 MGP_BALBcJ_G0040595.1 mouse_genomes_project 7 84793635 84793855 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0018331.1 MGP_BALBcJ_G0015610.1 mouse_genomes_project 7 55544719 55545642 + Gm15888 processed_transcript processed_transcript MGP_BALBcJ_T0085786.1 MGP_BALBcJ_G0032782.1 mouse_genomes_project 7 107657035 107723072 + MGP_BALBcJ_P0085786 Syt9 protein_coding protein_coding MGP_BALBcJ_T0085787.1 MGP_BALBcJ_G0032782.1 mouse_genomes_project 7 107657097 107832590 + MGP_BALBcJ_P0085787 Syt9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085788.1 MGP_BALBcJ_G0032782.1 mouse_genomes_project 7 107657097 107832593 + MGP_BALBcJ_P0085788 Syt9 protein_coding protein_coding MGP_BALBcJ_T0085789.1 MGP_BALBcJ_G0032782.1 mouse_genomes_project 7 107787890 107832590 + Syt9 protein_coding retained_intron MGP_BALBcJ_T0085790.1 MGP_BALBcJ_G0032782.1 mouse_genomes_project 7 107787924 107832590 + Syt9 protein_coding retained_intron MGP_BALBcJ_T0086139.1 MGP_BALBcJ_G0032888.1 mouse_genomes_project 7 118994606 119044021 - MGP_BALBcJ_P0086139 Tmc7 protein_coding protein_coding MGP_BALBcJ_T0086140.1 MGP_BALBcJ_G0032888.1 mouse_genomes_project 7 119005458 119043971 - Tmc7 protein_coding retained_intron MGP_BALBcJ_T0086141.1 MGP_BALBcJ_G0032888.1 mouse_genomes_project 7 119023097 119025485 - Tmc7 protein_coding retained_intron MGP_BALBcJ_T0086142.1 MGP_BALBcJ_G0032888.1 mouse_genomes_project 7 119030218 119043994 - Tmc7 protein_coding processed_transcript MGP_BALBcJ_T0085020.1 MGP_BALBcJ_G0032499.1 mouse_genomes_project 7 92596987 92683900 + MGP_BALBcJ_P0085020 Rab30 protein_coding protein_coding MGP_BALBcJ_T0085021.1 MGP_BALBcJ_G0032499.1 mouse_genomes_project 7 92666752 92683430 + MGP_BALBcJ_P0085021 Rab30 protein_coding protein_coding MGP_BALBcJ_T0085022.1 MGP_BALBcJ_G0032499.1 mouse_genomes_project 7 92666767 92683427 + MGP_BALBcJ_P0085022 Rab30 protein_coding protein_coding MGP_BALBcJ_T0010837.1 MGP_BALBcJ_G0008962.1 mouse_genomes_project 7 28282499 28282559 + Mir7668 miRNA miRNA MGP_BALBcJ_T0005143.1 MGP_BALBcJ_G0004383.1 mouse_genomes_project 7 22650007 22656673 - Gm26550 antisense antisense MGP_BALBcJ_T0005247.1 MGP_BALBcJ_G0004456.1 mouse_genomes_project 7 111265230 111266097 + Gm16336 antisense antisense MGP_BALBcJ_T0002246.1 MGP_BALBcJ_G0002158.1 mouse_genomes_project 7 73049156 73050809 + TEC TEC MGP_BALBcJ_T0085595.1 MGP_BALBcJ_G0032697.1 mouse_genomes_project 7 104405925 104422346 - MGP_BALBcJ_P0085595 protein_coding protein_coding MGP_BALBcJ_T0085599.1 MGP_BALBcJ_G0032697.1 mouse_genomes_project 7 104412017 104422333 - MGP_BALBcJ_P0085599 protein_coding protein_coding MGP_BALBcJ_T0010876.1 MGP_BALBcJ_G0009001.1 mouse_genomes_project 7 63814371 63814477 + Mir211 miRNA miRNA MGP_BALBcJ_T0081735.1 MGP_BALBcJ_G0031673.1 mouse_genomes_project 7 13496910 13505175 - MGP_BALBcJ_P0081735 Gltscr2 protein_coding protein_coding MGP_BALBcJ_T0081736.1 MGP_BALBcJ_G0031673.1 mouse_genomes_project 7 13496921 13504833 - Gltscr2 protein_coding retained_intron MGP_BALBcJ_T0081737.1 MGP_BALBcJ_G0031673.1 mouse_genomes_project 7 13501930 13505138 - Gltscr2 protein_coding processed_transcript MGP_BALBcJ_T0081711.1 MGP_BALBcJ_G0031661.1 mouse_genomes_project 7 11780667 11782788 - MGP_BALBcJ_P0081711 Obox8 protein_coding protein_coding MGP_BALBcJ_T0002200.1 MGP_BALBcJ_G0002112.1 mouse_genomes_project 7 33122157 33126038 + TEC TEC MGP_BALBcJ_T0082867.1 MGP_BALBcJ_G0031982.1 mouse_genomes_project 7 28430854 28470477 - MGP_BALBcJ_P0082867 Gm26920 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005295.1 MGP_BALBcJ_G0004491.1 mouse_genomes_project 7 144088650 144096508 - antisense antisense MGP_BALBcJ_T0084217.1 MGP_BALBcJ_G0032311.1 mouse_genomes_project 7 56941949 57367705 + MGP_BALBcJ_P0084217 Gabrb3 protein_coding protein_coding MGP_BALBcJ_T0084218.1 MGP_BALBcJ_G0032311.1 mouse_genomes_project 7 57117839 57366542 + MGP_BALBcJ_P0084218 Gabrb3 protein_coding protein_coding MGP_BALBcJ_T0084219.1 MGP_BALBcJ_G0032311.1 mouse_genomes_project 7 57118483 57367709 + MGP_BALBcJ_P0084219 Gabrb3 protein_coding protein_coding MGP_BALBcJ_T0084220.1 MGP_BALBcJ_G0032311.1 mouse_genomes_project 7 57118494 57301099 + Gabrb3 protein_coding retained_intron MGP_BALBcJ_T0084221.1 MGP_BALBcJ_G0032311.1 mouse_genomes_project 7 57118851 57355281 + MGP_BALBcJ_P0084221 Gabrb3 protein_coding protein_coding MGP_BALBcJ_T0084222.1 MGP_BALBcJ_G0032311.1 mouse_genomes_project 7 57330445 57355226 + Gabrb3 protein_coding retained_intron MGP_BALBcJ_T0002282.1 MGP_BALBcJ_G0002193.1 mouse_genomes_project 7 92495494 92499251 + TEC TEC MGP_BALBcJ_T0081885.1 MGP_BALBcJ_G0031715.1 mouse_genomes_project 7 15798057 15803942 + MGP_BALBcJ_P0081885 Ceacam12 protein_coding protein_coding MGP_BALBcJ_T0081886.1 MGP_BALBcJ_G0031715.1 mouse_genomes_project 7 15798067 15810113 + MGP_BALBcJ_P0081886 Ceacam12 protein_coding protein_coding MGP_BALBcJ_T0081887.1 MGP_BALBcJ_G0031715.1 mouse_genomes_project 7 15798119 15802556 + MGP_BALBcJ_P0081887 Ceacam12 protein_coding protein_coding MGP_BALBcJ_T0099016.1 MGP_BALBcJ_G0037058.1 mouse_genomes_project 7 124671489 124776335 + Gm15338 sense_intronic sense_intronic MGP_BALBcJ_T0081712.1 MGP_BALBcJ_G0031662.1 mouse_genomes_project 7 11857627 11886588 - MGP_BALBcJ_P0081712 Sult2a8 protein_coding protein_coding MGP_BALBcJ_T0081713.1 MGP_BALBcJ_G0031662.1 mouse_genomes_project 7 11857630 11894012 - MGP_BALBcJ_P0081713 Sult2a8 protein_coding protein_coding MGP_BALBcJ_T0081714.1 MGP_BALBcJ_G0031662.1 mouse_genomes_project 7 11863080 11894195 - MGP_BALBcJ_P0081714 Sult2a8 protein_coding protein_coding MGP_BALBcJ_T0084309.1 MGP_BALBcJ_G0032332.1 mouse_genomes_project 7 64437600 64443542 - MGP_BALBcJ_P0084309 Ndnl2 protein_coding protein_coding MGP_BALBcJ_T0085760.1 MGP_BALBcJ_G0032758.1 mouse_genomes_project 7 107058650 107059697 - MGP_BALBcJ_P0085760 Olfr697 protein_coding protein_coding MGP_BALBcJ_T0083028.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28961594 28981487 - MGP_BALBcJ_P0083028 Kmt2b protein_coding protein_coding MGP_BALBcJ_T0083029.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28961594 28981478 - MGP_BALBcJ_P0083029 Kmt2b protein_coding protein_coding MGP_BALBcJ_T0083030.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28961596 28978112 - MGP_BALBcJ_P0083030 Kmt2b protein_coding protein_coding MGP_BALBcJ_T0083031.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28962489 28963401 - Kmt2b protein_coding retained_intron MGP_BALBcJ_T0083032.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28965909 28966915 - Kmt2b protein_coding retained_intron MGP_BALBcJ_T0083033.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28968313 28969905 - Kmt2b protein_coding processed_transcript MGP_BALBcJ_T0083034.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28969770 28971750 - Kmt2b protein_coding processed_transcript MGP_BALBcJ_T0083035.1 MGP_BALBcJ_G0032015.1 mouse_genomes_project 7 28977036 28977846 - Kmt2b protein_coding processed_transcript MGP_BALBcJ_T0086560.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127128816 127143543 + Sgf29 protein_coding processed_transcript MGP_BALBcJ_T0086561.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127128816 127152459 + MGP_BALBcJ_P0086561 Sgf29 protein_coding protein_coding MGP_BALBcJ_T0086562.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127128819 127144489 + MGP_BALBcJ_P0086562 Sgf29 protein_coding protein_coding MGP_BALBcJ_T0086563.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127128829 127143638 + Sgf29 protein_coding retained_intron MGP_BALBcJ_T0086564.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127128854 127151415 + Sgf29 protein_coding retained_intron MGP_BALBcJ_T0086565.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127128909 127151773 + MGP_BALBcJ_P0086565 Sgf29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086566.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127140600 127151852 + MGP_BALBcJ_P0086566 Sgf29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086567.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127143331 127150222 + Sgf29 protein_coding retained_intron MGP_BALBcJ_T0086568.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127151110 127151926 + MGP_BALBcJ_P0086568 Sgf29 protein_coding protein_coding MGP_BALBcJ_T0086569.1 MGP_BALBcJ_G0032978.1 mouse_genomes_project 7 127151564 127152313 + Sgf29 protein_coding processed_transcript MGP_BALBcJ_T0087880.1 MGP_BALBcJ_G0033258.1 mouse_genomes_project 7 144281887 144317500 - MGP_BALBcJ_P0087880 Nap1l4 protein_coding protein_coding MGP_BALBcJ_T0102707.1 MGP_BALBcJ_G0040522.1 mouse_genomes_project 7 12369074 12369331 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087443.1 MGP_BALBcJ_G0033160.1 mouse_genomes_project 7 141094625 141095540 - MGP_BALBcJ_P0087443 Olfr531 protein_coding protein_coding MGP_BALBcJ_T0084053.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46268263 46278736 + MGP_BALBcJ_P0084053 Ldha protein_coding protein_coding MGP_BALBcJ_T0084054.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46272621 46282359 + MGP_BALBcJ_P0084054 Ldha protein_coding protein_coding MGP_BALBcJ_T0084055.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46272625 46275787 + Ldha protein_coding processed_transcript MGP_BALBcJ_T0084056.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46272625 46274887 + Ldha protein_coding retained_intron MGP_BALBcJ_T0084057.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46272645 46278745 + MGP_BALBcJ_P0084057 Ldha protein_coding protein_coding MGP_BALBcJ_T0084058.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46272879 46275793 + Ldha protein_coding processed_transcript MGP_BALBcJ_T0084059.1 MGP_BALBcJ_G0032265.1 mouse_genomes_project 7 46273913 46282358 + MGP_BALBcJ_P0084059 Ldha protein_coding protein_coding MGP_BALBcJ_T0086928.1 MGP_BALBcJ_G0033040.1 mouse_genomes_project 7 128297395 128318215 - MGP_BALBcJ_P0086928 Stx1b protein_coding protein_coding MGP_BALBcJ_T0086929.1 MGP_BALBcJ_G0033040.1 mouse_genomes_project 7 128300773 128304319 - MGP_BALBcJ_P0086929 Stx1b protein_coding protein_coding MGP_BALBcJ_T0082560.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25835393 25888257 + MGP_BALBcJ_P0082560 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082561.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25836406 25888263 + MGP_BALBcJ_P0082561 Akt2 protein_coding unknown_likely_coding MGP_BALBcJ_T0082562.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25836420 25886881 + MGP_BALBcJ_P0082562 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082563.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25837042 25875484 + MGP_BALBcJ_P0082563 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082564.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25837132 25880101 + MGP_BALBcJ_P0082564 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082565.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25838221 25861459 + Akt2 protein_coding processed_transcript MGP_BALBcJ_T0082566.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25841501 25864207 + MGP_BALBcJ_P0082566 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082567.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25850420 25875508 + MGP_BALBcJ_P0082567 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082568.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25850440 25886879 + MGP_BALBcJ_P0082568 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082569.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25850481 25886884 + MGP_BALBcJ_P0082569 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082570.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25852359 25880081 + MGP_BALBcJ_P0082570 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082571.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25852615 25864260 + MGP_BALBcJ_P0082571 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082572.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25853273 25884987 + MGP_BALBcJ_P0082572 Akt2 protein_coding protein_coding MGP_BALBcJ_T0082573.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25875163 25881652 + Akt2 protein_coding retained_intron MGP_BALBcJ_T0082574.1 MGP_BALBcJ_G0031902.1 mouse_genomes_project 7 25882868 25884260 + Akt2 protein_coding retained_intron MGP_BALBcJ_T0081793.1 MGP_BALBcJ_G0031686.1 mouse_genomes_project 7 13882805 13891431 + MGP_BALBcJ_P0081793 Bbc3 protein_coding protein_coding MGP_BALBcJ_T0081794.1 MGP_BALBcJ_G0031686.1 mouse_genomes_project 7 13883677 13886964 + MGP_BALBcJ_P0081794 Bbc3 protein_coding protein_coding MGP_BALBcJ_T0081795.1 MGP_BALBcJ_G0031686.1 mouse_genomes_project 7 13886742 13890925 + Bbc3 protein_coding processed_transcript MGP_BALBcJ_T0086016.1 MGP_BALBcJ_G0032866.1 mouse_genomes_project 7 114164357 114441111 + MGP_BALBcJ_P0086016 Spon1 protein_coding protein_coding MGP_BALBcJ_T0086017.1 MGP_BALBcJ_G0032866.1 mouse_genomes_project 7 114164533 114331108 + MGP_BALBcJ_P0086017 Spon1 protein_coding protein_coding MGP_BALBcJ_T0086279.1 MGP_BALBcJ_G0032923.1 mouse_genomes_project 7 121388217 121418937 + MGP_BALBcJ_P0086279 Polr3e protein_coding protein_coding MGP_BALBcJ_T0086280.1 MGP_BALBcJ_G0032923.1 mouse_genomes_project 7 121388217 121418937 + MGP_BALBcJ_P0086280 Polr3e protein_coding protein_coding MGP_BALBcJ_T0015826.1 MGP_BALBcJ_G0013923.1 mouse_genomes_project 7 81190763 81191540 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084922.1 MGP_BALBcJ_G0032472.1 mouse_genomes_project 7 86582536 86639791 - MGP_BALBcJ_P0084922 Folh1 protein_coding protein_coding MGP_BALBcJ_T0084923.1 MGP_BALBcJ_G0032472.1 mouse_genomes_project 7 86582536 86639735 - MGP_BALBcJ_P0084923 Folh1 protein_coding protein_coding MGP_BALBcJ_T0002201.1 MGP_BALBcJ_G0002113.1 mouse_genomes_project 7 33795682 33796299 - TEC TEC MGP_BALBcJ_T0087468.1 MGP_BALBcJ_G0033178.1 mouse_genomes_project 7 141564227 141567223 - MGP_BALBcJ_P0087468 Bet1l protein_coding protein_coding MGP_BALBcJ_T0085569.1 MGP_BALBcJ_G0032685.1 mouse_genomes_project 7 104238957 104239905 - MGP_BALBcJ_P0085569 Olfr645 protein_coding protein_coding MGP_BALBcJ_T0102745.1 MGP_BALBcJ_G0040560.1 mouse_genomes_project 7 43312990 43363330 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083526.1 MGP_BALBcJ_G0032130.1 mouse_genomes_project 7 43020734 43025639 + MGP_BALBcJ_P0083526 Klk11 protein_coding protein_coding MGP_BALBcJ_T0083527.1 MGP_BALBcJ_G0032130.1 mouse_genomes_project 7 43022704 43025329 + Klk11 protein_coding retained_intron MGP_BALBcJ_T0083528.1 MGP_BALBcJ_G0032130.1 mouse_genomes_project 7 43022704 43025634 + MGP_BALBcJ_P0083528 Klk11 protein_coding protein_coding MGP_BALBcJ_T0083529.1 MGP_BALBcJ_G0032130.1 mouse_genomes_project 7 43022855 43025436 + Klk11 protein_coding processed_transcript MGP_BALBcJ_T0083530.1 MGP_BALBcJ_G0032130.1 mouse_genomes_project 7 43022855 43025436 + Klk11 protein_coding processed_transcript MGP_BALBcJ_T0082364.1 MGP_BALBcJ_G0031854.1 mouse_genomes_project 7 23731795 23737933 + MGP_BALBcJ_P0082364 Atp5sl protein_coding protein_coding MGP_BALBcJ_T0082365.1 MGP_BALBcJ_G0031854.1 mouse_genomes_project 7 23731805 23732921 + Atp5sl protein_coding retained_intron MGP_BALBcJ_T0082366.1 MGP_BALBcJ_G0031854.1 mouse_genomes_project 7 23731874 23737930 + MGP_BALBcJ_P0082366 Atp5sl protein_coding protein_coding MGP_BALBcJ_T0082367.1 MGP_BALBcJ_G0031854.1 mouse_genomes_project 7 23732918 23734788 + Atp5sl protein_coding retained_intron MGP_BALBcJ_T0082368.1 MGP_BALBcJ_G0031854.1 mouse_genomes_project 7 23733277 23736464 + MGP_BALBcJ_P0082368 Atp5sl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082369.1 MGP_BALBcJ_G0031854.1 mouse_genomes_project 7 23733284 23734385 + Atp5sl protein_coding processed_transcript MGP_BALBcJ_T0082127.1 MGP_BALBcJ_G0031795.1 mouse_genomes_project 7 21906504 21907476 + MGP_BALBcJ_P0082127 Vmn1r179 protein_coding protein_coding MGP_BALBcJ_T0081705.1 MGP_BALBcJ_G0031656.1 mouse_genomes_project 7 11303713 11394023 - MGP_BALBcJ_P0081705 protein_coding protein_coding MGP_BALBcJ_T0102775.1 MGP_BALBcJ_G0040590.1 mouse_genomes_project 7 84562051 84564180 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083531.1 MGP_BALBcJ_G0032131.1 mouse_genomes_project 7 43027410 43031917 + MGP_BALBcJ_P0083531 Klk10 protein_coding protein_coding MGP_BALBcJ_T0086262.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121203595 121271595 + MGP_BALBcJ_P0086262 Vwa3a protein_coding protein_coding MGP_BALBcJ_T0086263.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121203595 121256853 + MGP_BALBcJ_P0086263 Vwa3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086264.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121204085 121271792 + MGP_BALBcJ_P0086264 Vwa3a protein_coding protein_coding MGP_BALBcJ_T0086265.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121204085 121271592 + MGP_BALBcJ_P0086265 Vwa3a protein_coding protein_coding MGP_BALBcJ_T0086266.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121204149 121271064 + MGP_BALBcJ_P0086266 Vwa3a protein_coding unknown_likely_coding MGP_BALBcJ_T0086267.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121249149 121256854 + MGP_BALBcJ_P0086267 Vwa3a protein_coding protein_coding MGP_BALBcJ_T0086268.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121250807 121256854 + Vwa3a protein_coding processed_transcript MGP_BALBcJ_T0086269.1 MGP_BALBcJ_G0032921.1 mouse_genomes_project 7 121253237 121259370 + MGP_BALBcJ_P0086269 Vwa3a protein_coding protein_coding MGP_BALBcJ_T0082229.1 MGP_BALBcJ_G0031826.1 mouse_genomes_project 7 22735567 22762658 - MGP_BALBcJ_P0082229 Gm4763 protein_coding protein_coding MGP_BALBcJ_T0082230.1 MGP_BALBcJ_G0031826.1 mouse_genomes_project 7 22754766 22756563 - MGP_BALBcJ_P0082230 Gm4763 protein_coding protein_coding MGP_BALBcJ_T0082231.1 MGP_BALBcJ_G0031826.1 mouse_genomes_project 7 22755182 22756824 - Gm4763 protein_coding processed_transcript MGP_BALBcJ_T0015750.1 MGP_BALBcJ_G0013847.1 mouse_genomes_project 7 32590626 32591213 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085502.1 MGP_BALBcJ_G0032623.1 mouse_genomes_project 7 103028179 103029136 - MGP_BALBcJ_P0085502 Olfr575 protein_coding protein_coding MGP_BALBcJ_T0102817.1 MGP_BALBcJ_G0040632.1 mouse_genomes_project 7 104114189 104115144 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081507.1 MGP_BALBcJ_G0031571.1 mouse_genomes_project 7 2382752 2393472 + MGP_BALBcJ_P0081507 Gm5065 protein_coding protein_coding MGP_BALBcJ_T0086233.1 MGP_BALBcJ_G0032910.1 mouse_genomes_project 7 120386350 120557813 - MGP_BALBcJ_P0086233 Dnah3 protein_coding protein_coding MGP_BALBcJ_T0086234.1 MGP_BALBcJ_G0032910.1 mouse_genomes_project 7 120386350 120557813 - MGP_BALBcJ_P0086234 Dnah3 protein_coding unknown_likely_coding MGP_BALBcJ_T0083811.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44713627 44741179 - MGP_BALBcJ_P0083811 Ppfia3 protein_coding protein_coding MGP_BALBcJ_T0083812.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44713628 44715273 - Ppfia3 protein_coding processed_transcript MGP_BALBcJ_T0083813.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44713628 44741484 - MGP_BALBcJ_P0083813 Ppfia3 protein_coding protein_coding MGP_BALBcJ_T0083814.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44713774 44741484 - Ppfia3 protein_coding retained_intron MGP_BALBcJ_T0083815.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44713776 44734578 - MGP_BALBcJ_P0083815 Ppfia3 protein_coding protein_coding MGP_BALBcJ_T0083816.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44713782 44715264 - Ppfia3 protein_coding processed_transcript MGP_BALBcJ_T0083817.1 MGP_BALBcJ_G0032206.1 mouse_genomes_project 7 44714323 44715662 - Ppfia3 protein_coding retained_intron MGP_BALBcJ_T0018298.1 MGP_BALBcJ_G0015597.1 mouse_genomes_project 7 25674201 25675435 + Gm44924 processed_transcript processed_transcript MGP_BALBcJ_T0015719.1 MGP_BALBcJ_G0013816.1 mouse_genomes_project 7 22157607 22163280 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101973.1 MGP_BALBcJ_G0039825.1 mouse_genomes_project 7 40602333 40602802 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0084347.1 MGP_BALBcJ_G0032339.1 mouse_genomes_project 7 65653252 65663038 + MGP_BALBcJ_P0084347 Vimp protein_coding protein_coding MGP_BALBcJ_T0084348.1 MGP_BALBcJ_G0032339.1 mouse_genomes_project 7 65653283 65663031 + MGP_BALBcJ_P0084348 Vimp protein_coding protein_coding MGP_BALBcJ_T0084349.1 MGP_BALBcJ_G0032339.1 mouse_genomes_project 7 65653311 65661076 + Vimp protein_coding retained_intron MGP_BALBcJ_T0084350.1 MGP_BALBcJ_G0032339.1 mouse_genomes_project 7 65653312 65663029 + MGP_BALBcJ_P0084350 Vimp protein_coding protein_coding MGP_BALBcJ_T0084351.1 MGP_BALBcJ_G0032339.1 mouse_genomes_project 7 65653321 65662747 + MGP_BALBcJ_P0084351 Vimp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008926.1 MGP_BALBcJ_G0007201.1 mouse_genomes_project 7 79872944 79874549 + Gm45202 lincRNA lincRNA MGP_BALBcJ_T0008894.1 MGP_BALBcJ_G0007181.1 mouse_genomes_project 7 72811343 72814614 + Gm44670 lincRNA lincRNA MGP_BALBcJ_T0008895.1 MGP_BALBcJ_G0007181.1 mouse_genomes_project 7 72811402 72815049 + Gm44670 lincRNA lincRNA MGP_BALBcJ_T0102759.1 MGP_BALBcJ_G0040574.1 mouse_genomes_project 7 47222798 47597790 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081321.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112891 1118041 + MGP_BALBcJ_P0081321 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081322.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112901 1124035 + MGP_BALBcJ_P0081322 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081323.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112901 1115858 + MGP_BALBcJ_P0081323 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081324.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112912 1116311 + MGP_BALBcJ_P0081324 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081325.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112918 1124030 + MGP_BALBcJ_P0081325 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081326.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112923 1117966 + MGP_BALBcJ_P0081326 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081327.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1112936 1124031 + Leng8 protein_coding retained_intron MGP_BALBcJ_T0081328.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1113420 1116952 + MGP_BALBcJ_P0081328 Leng8 protein_coding protein_coding MGP_BALBcJ_T0081329.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1118016 1118787 + Leng8 protein_coding retained_intron MGP_BALBcJ_T0081330.1 MGP_BALBcJ_G0031520.1 mouse_genomes_project 7 1120577 1121500 + Leng8 protein_coding retained_intron MGP_BALBcJ_T0084813.1 MGP_BALBcJ_G0032425.1 mouse_genomes_project 7 81514853 81522330 + MGP_BALBcJ_P0084813 protein_coding protein_coding MGP_BALBcJ_T0084814.1 MGP_BALBcJ_G0032425.1 mouse_genomes_project 7 81514978 81519585 + MGP_BALBcJ_P0084814 protein_coding protein_coding MGP_BALBcJ_T0084815.1 MGP_BALBcJ_G0032425.1 mouse_genomes_project 7 81515211 81522285 + MGP_BALBcJ_P0084815 protein_coding protein_coding MGP_BALBcJ_T0086308.1 MGP_BALBcJ_G0032935.1 mouse_genomes_project 7 122472437 122506925 - MGP_BALBcJ_P0086308 Gga2 protein_coding protein_coding MGP_BALBcJ_T0086309.1 MGP_BALBcJ_G0032935.1 mouse_genomes_project 7 122472437 122506870 - MGP_BALBcJ_P0086309 Gga2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086310.1 MGP_BALBcJ_G0032935.1 mouse_genomes_project 7 122474480 122488187 - Gga2 protein_coding retained_intron MGP_BALBcJ_T0086311.1 MGP_BALBcJ_G0032935.1 mouse_genomes_project 7 122482297 122484745 - Gga2 protein_coding retained_intron MGP_BALBcJ_T0086312.1 MGP_BALBcJ_G0032935.1 mouse_genomes_project 7 122490442 122506883 - Gga2 protein_coding retained_intron MGP_BALBcJ_T0086313.1 MGP_BALBcJ_G0032935.1 mouse_genomes_project 7 122496117 122506890 - Gga2 protein_coding retained_intron MGP_BALBcJ_T0018387.1 MGP_BALBcJ_G0015634.1 mouse_genomes_project 7 128982684 128996314 + Gm45019 processed_transcript lincRNA MGP_BALBcJ_T0018388.1 MGP_BALBcJ_G0015634.1 mouse_genomes_project 7 128994960 128996313 + Gm45019 processed_transcript retained_intron MGP_BALBcJ_T0085146.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98509649 98580003 - MGP_BALBcJ_P0085146 Emsy protein_coding protein_coding MGP_BALBcJ_T0085147.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98511438 98579770 - MGP_BALBcJ_P0085147 Emsy protein_coding protein_coding MGP_BALBcJ_T0085148.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98513102 98579775 - MGP_BALBcJ_P0085148 Emsy protein_coding protein_coding MGP_BALBcJ_T0085149.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98513768 98516734 - Emsy protein_coding retained_intron MGP_BALBcJ_T0085150.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98515997 98517514 - Emsy protein_coding processed_transcript MGP_BALBcJ_T0085151.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98517622 98535956 - MGP_BALBcJ_P0085151 Emsy protein_coding protein_coding MGP_BALBcJ_T0085152.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98518992 98525004 - Emsy protein_coding retained_intron MGP_BALBcJ_T0085153.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98519542 98538499 - MGP_BALBcJ_P0085153 Emsy protein_coding protein_coding MGP_BALBcJ_T0085154.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98523169 98525464 - Emsy protein_coding retained_intron MGP_BALBcJ_T0085155.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98525272 98579819 - MGP_BALBcJ_P0085155 Emsy protein_coding protein_coding MGP_BALBcJ_T0085156.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98553509 98579788 - MGP_BALBcJ_P0085156 Emsy protein_coding protein_coding MGP_BALBcJ_T0085157.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98560498 98568415 - MGP_BALBcJ_P0085157 Emsy protein_coding protein_coding MGP_BALBcJ_T0085158.1 MGP_BALBcJ_G0032526.1 mouse_genomes_project 7 98566275 98580007 - Emsy protein_coding retained_intron MGP_BALBcJ_T0015873.1 MGP_BALBcJ_G0013970.1 mouse_genomes_project 7 116938601 116938889 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085775.1 MGP_BALBcJ_G0032772.1 mouse_genomes_project 7 107301375 107305363 - MGP_BALBcJ_P0085775 Olfr711 protein_coding protein_coding MGP_BALBcJ_T0084400.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67092207 67222877 - MGP_BALBcJ_P0084400 Lrrc28 protein_coding protein_coding MGP_BALBcJ_T0084401.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67092208 67218840 - MGP_BALBcJ_P0084401 Lrrc28 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084402.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67093197 67158729 - Lrrc28 protein_coding processed_transcript MGP_BALBcJ_T0084403.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67108787 67218876 - MGP_BALBcJ_P0084403 Lrrc28 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084404.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67108912 67114920 - Lrrc28 protein_coding processed_transcript MGP_BALBcJ_T0084405.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67110907 67197733 - Lrrc28 protein_coding processed_transcript MGP_BALBcJ_T0084406.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67110998 67185046 - Lrrc28 protein_coding processed_transcript MGP_BALBcJ_T0084407.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67111008 67197682 - Lrrc28 protein_coding processed_transcript MGP_BALBcJ_T0084408.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67124288 67222850 - MGP_BALBcJ_P0084408 Lrrc28 protein_coding protein_coding MGP_BALBcJ_T0084409.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67173499 67222853 - MGP_BALBcJ_P0084409 Lrrc28 protein_coding protein_coding MGP_BALBcJ_T0084410.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67174501 67197704 - Lrrc28 protein_coding processed_transcript MGP_BALBcJ_T0084411.1 MGP_BALBcJ_G0032350.1 mouse_genomes_project 7 67195767 67222914 - MGP_BALBcJ_P0084411 Lrrc28 protein_coding protein_coding MGP_BALBcJ_T0015875.1 MGP_BALBcJ_G0013972.1 mouse_genomes_project 7 121487834 121488942 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002296.1 MGP_BALBcJ_G0002207.1 mouse_genomes_project 7 123202891 123204519 - TEC TEC MGP_BALBcJ_T0008817.1 MGP_BALBcJ_G0007121.1 mouse_genomes_project 7 33878926 33885327 - Gm45229 lincRNA lincRNA MGP_BALBcJ_T0086865.1 MGP_BALBcJ_G0033029.1 mouse_genomes_project 7 128080857 128087071 - MGP_BALBcJ_P0086865 Ccdc189 protein_coding protein_coding MGP_BALBcJ_T0086866.1 MGP_BALBcJ_G0033029.1 mouse_genomes_project 7 128081834 128084815 - MGP_BALBcJ_P0086866 Ccdc189 protein_coding protein_coding MGP_BALBcJ_T0086867.1 MGP_BALBcJ_G0033029.1 mouse_genomes_project 7 128081861 128084197 - Ccdc189 protein_coding retained_intron MGP_BALBcJ_T0086868.1 MGP_BALBcJ_G0033029.1 mouse_genomes_project 7 128083687 128086645 - Ccdc189 protein_coding retained_intron MGP_BALBcJ_T0086869.1 MGP_BALBcJ_G0033029.1 mouse_genomes_project 7 128085539 128086856 - Ccdc189 protein_coding retained_intron MGP_BALBcJ_T0084733.1 MGP_BALBcJ_G0032408.1 mouse_genomes_project 7 80310902 80415378 - MGP_BALBcJ_P0084733 Crtc3 protein_coding protein_coding MGP_BALBcJ_T0084734.1 MGP_BALBcJ_G0032408.1 mouse_genomes_project 7 80317114 80334160 - MGP_BALBcJ_P0084734 Crtc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084735.1 MGP_BALBcJ_G0032408.1 mouse_genomes_project 7 80320005 80323677 - Crtc3 protein_coding retained_intron MGP_BALBcJ_T0084736.1 MGP_BALBcJ_G0032408.1 mouse_genomes_project 7 80320067 80354773 - MGP_BALBcJ_P0084736 Crtc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084737.1 MGP_BALBcJ_G0032408.1 mouse_genomes_project 7 80342322 80354854 - Crtc3 protein_coding retained_intron MGP_BALBcJ_T0084738.1 MGP_BALBcJ_G0032408.1 mouse_genomes_project 7 80399742 80415378 - Crtc3 protein_coding retained_intron MGP_BALBcJ_T0084859.1 MGP_BALBcJ_G0032437.1 mouse_genomes_project 7 82908910 82916180 + MGP_BALBcJ_P0084859 protein_coding protein_coding MGP_BALBcJ_T0098391.1 MGP_BALBcJ_G0036445.1 mouse_genomes_project 7 108455474 108456418 - pseudogene pseudogene MGP_BALBcJ_T0087536.1 MGP_BALBcJ_G0033196.1 mouse_genomes_project 7 141892054 141900663 - MGP_BALBcJ_P0087536 Rnh1 protein_coding protein_coding MGP_BALBcJ_T0087537.1 MGP_BALBcJ_G0033196.1 mouse_genomes_project 7 141892054 141904574 - MGP_BALBcJ_P0087537 Rnh1 protein_coding protein_coding MGP_BALBcJ_T0087447.1 MGP_BALBcJ_G0033164.1 mouse_genomes_project 7 141191277 141200268 - MGP_BALBcJ_P0087447 Olfr536 protein_coding protein_coding MGP_BALBcJ_T0084592.1 MGP_BALBcJ_G0032383.1 mouse_genomes_project 7 79406528 79424060 - MGP_BALBcJ_P0084592 Kif7 protein_coding protein_coding MGP_BALBcJ_T0084593.1 MGP_BALBcJ_G0032383.1 mouse_genomes_project 7 79406529 79422625 - MGP_BALBcJ_P0084593 Kif7 protein_coding protein_coding MGP_BALBcJ_T0084594.1 MGP_BALBcJ_G0032383.1 mouse_genomes_project 7 79406529 79422625 - MGP_BALBcJ_P0084594 Kif7 protein_coding protein_coding MGP_BALBcJ_T0084595.1 MGP_BALBcJ_G0032383.1 mouse_genomes_project 7 79406949 79424009 - MGP_BALBcJ_P0084595 Kif7 protein_coding protein_coding MGP_BALBcJ_T0008963.1 MGP_BALBcJ_G0007224.1 mouse_genomes_project 7 110344953 110353225 - lincRNA lincRNA MGP_BALBcJ_T0008964.1 MGP_BALBcJ_G0007224.1 mouse_genomes_project 7 110344981 110345811 - lincRNA lincRNA MGP_BALBcJ_T0008965.1 MGP_BALBcJ_G0007224.1 mouse_genomes_project 7 110344989 110497858 - lincRNA lincRNA MGP_BALBcJ_T0008966.1 MGP_BALBcJ_G0007224.1 mouse_genomes_project 7 110347717 110353210 - lincRNA lincRNA MGP_BALBcJ_T0005232.1 MGP_BALBcJ_G0004446.1 mouse_genomes_project 7 96504131 96537026 - Gm15414 antisense antisense MGP_BALBcJ_T0084245.1 MGP_BALBcJ_G0032318.1 mouse_genomes_project 7 61936281 61940940 + MGP_BALBcJ_P0084245 Magel2 protein_coding protein_coding MGP_BALBcJ_T0002249.1 MGP_BALBcJ_G0002161.1 mouse_genomes_project 7 73155416 73157345 - TEC TEC MGP_BALBcJ_T0086091.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116774400 116777623 - MGP_BALBcJ_P0086091 Rps13 protein_coding protein_coding MGP_BALBcJ_T0086092.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116774406 116776610 - Rps13 protein_coding retained_intron MGP_BALBcJ_T0086093.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116774407 116777558 - Rps13 protein_coding retained_intron MGP_BALBcJ_T0086094.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116774407 116777563 - Rps13 protein_coding retained_intron MGP_BALBcJ_T0086095.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116774407 116777594 - MGP_BALBcJ_P0086095 Rps13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086096.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116775484 116777545 - Rps13 protein_coding retained_intron MGP_BALBcJ_T0086097.1 MGP_BALBcJ_G0032878.1 mouse_genomes_project 7 116776467 116777550 - Rps13 protein_coding retained_intron MGP_BALBcJ_T0082498.1 MGP_BALBcJ_G0031889.1 mouse_genomes_project 7 25496343 25504659 + Numbl protein_coding processed_transcript MGP_BALBcJ_T0082499.1 MGP_BALBcJ_G0031889.1 mouse_genomes_project 7 25496635 25520027 + MGP_BALBcJ_P0082499 Numbl protein_coding protein_coding MGP_BALBcJ_T0082500.1 MGP_BALBcJ_G0031889.1 mouse_genomes_project 7 25496693 25502808 + Numbl protein_coding processed_transcript MGP_BALBcJ_T0082501.1 MGP_BALBcJ_G0031889.1 mouse_genomes_project 7 25496716 25520030 + Numbl protein_coding retained_intron MGP_BALBcJ_T0082502.1 MGP_BALBcJ_G0031889.1 mouse_genomes_project 7 25499296 25519867 + Numbl protein_coding retained_intron MGP_BALBcJ_T0081571.1 MGP_BALBcJ_G0031602.1 mouse_genomes_project 7 4362818 4381779 - MGP_BALBcJ_P0081571 Clcn4 protein_coding protein_coding MGP_BALBcJ_T0100074.1 MGP_BALBcJ_G0038110.1 mouse_genomes_project 7 77596528 77596709 - Gm23239 snRNA snRNA MGP_BALBcJ_T0015802.1 MGP_BALBcJ_G0013899.1 mouse_genomes_project 7 65700832 65701578 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002295.1 MGP_BALBcJ_G0002206.1 mouse_genomes_project 7 123087463 123088810 + TEC TEC MGP_BALBcJ_T0002286.1 MGP_BALBcJ_G0002197.1 mouse_genomes_project 7 119952818 119955421 + TEC TEC MGP_BALBcJ_T0002261.1 MGP_BALBcJ_G0002172.1 mouse_genomes_project 7 76303845 76304796 + TEC TEC MGP_BALBcJ_T0005266.1 MGP_BALBcJ_G0004469.1 mouse_genomes_project 7 126032725 126034075 - Gm44876 antisense antisense MGP_BALBcJ_T0084510.1 MGP_BALBcJ_G0032370.1 mouse_genomes_project 7 78477379 78487249 + MGP_BALBcJ_P0084510 Mrps11 protein_coding protein_coding MGP_BALBcJ_T0084511.1 MGP_BALBcJ_G0032370.1 mouse_genomes_project 7 78477573 78485497 + Mrps11 protein_coding retained_intron MGP_BALBcJ_T0084512.1 MGP_BALBcJ_G0032370.1 mouse_genomes_project 7 78477615 78483674 + Mrps11 protein_coding retained_intron MGP_BALBcJ_T0084513.1 MGP_BALBcJ_G0032370.1 mouse_genomes_project 7 78477616 78487249 + MGP_BALBcJ_P0084513 Mrps11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084514.1 MGP_BALBcJ_G0032370.1 mouse_genomes_project 7 78477630 78485184 + Mrps11 protein_coding retained_intron MGP_BALBcJ_T0084515.1 MGP_BALBcJ_G0032370.1 mouse_genomes_project 7 78477631 78483566 + Mrps11 protein_coding retained_intron MGP_BALBcJ_T0015896.1 MGP_BALBcJ_G0013993.1 mouse_genomes_project 7 128632173 128632520 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099009.1 MGP_BALBcJ_G0037052.1 mouse_genomes_project 7 71788730 71789770 - sense_intronic sense_intronic MGP_BALBcJ_T0087029.1 MGP_BALBcJ_G0033062.1 mouse_genomes_project 7 128758506 128762984 + MGP_BALBcJ_P0087029 Tgfb1i1 protein_coding protein_coding MGP_BALBcJ_T0083026.1 MGP_BALBcJ_G0032014.1 mouse_genomes_project 7 28958384 28960914 + MGP_BALBcJ_P0083026 Igflr1 protein_coding protein_coding MGP_BALBcJ_T0083027.1 MGP_BALBcJ_G0032014.1 mouse_genomes_project 7 28959031 28960911 + MGP_BALBcJ_P0083027 Igflr1 protein_coding protein_coding MGP_BALBcJ_T0101765.1 MGP_BALBcJ_G0039718.1 mouse_genomes_project 7 128829189 128855298 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0015869.1 MGP_BALBcJ_G0013966.1 mouse_genomes_project 7 110883123 110883453 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101323.1 MGP_BALBcJ_G0039359.1 mouse_genomes_project 7 57660375 57660507 - Gm26288 snoRNA snoRNA MGP_BALBcJ_T0086852.1 MGP_BALBcJ_G0033027.1 mouse_genomes_project 7 128059927 128063808 + MGP_BALBcJ_P0086852 Tmem265 protein_coding protein_coding MGP_BALBcJ_T0086853.1 MGP_BALBcJ_G0033027.1 mouse_genomes_project 7 128060116 128065478 + MGP_BALBcJ_P0086853 Tmem265 protein_coding protein_coding MGP_BALBcJ_T0085826.1 MGP_BALBcJ_G0032816.1 mouse_genomes_project 7 108993515 108994460 + MGP_BALBcJ_P0085826 Olfr510 protein_coding protein_coding MGP_BALBcJ_T0085577.1 MGP_BALBcJ_G0032692.1 mouse_genomes_project 7 104336626 104343236 - MGP_BALBcJ_P0085577 Olfr649 protein_coding protein_coding MGP_BALBcJ_T0085578.1 MGP_BALBcJ_G0032692.1 mouse_genomes_project 7 104336627 104337566 - MGP_BALBcJ_P0085578 Olfr649 protein_coding protein_coding MGP_BALBcJ_T0101366.1 MGP_BALBcJ_G0039402.1 mouse_genomes_project 7 142188210 142188347 + Snora52 snoRNA snoRNA MGP_BALBcJ_T0008901.1 MGP_BALBcJ_G0007186.1 mouse_genomes_project 7 73299836 73300393 - lincRNA lincRNA MGP_BALBcJ_T0086723.1 MGP_BALBcJ_G0033002.1 mouse_genomes_project 7 127506051 127508371 - MGP_BALBcJ_P0086723 protein_coding protein_coding MGP_BALBcJ_T0086726.1 MGP_BALBcJ_G0033002.1 mouse_genomes_project 7 127506193 127508339 - MGP_BALBcJ_P0086726 protein_coding protein_coding MGP_BALBcJ_T0086727.1 MGP_BALBcJ_G0033002.1 mouse_genomes_project 7 127506395 127507699 - MGP_BALBcJ_P0086727 protein_coding protein_coding MGP_BALBcJ_T0086728.1 MGP_BALBcJ_G0033002.1 mouse_genomes_project 7 127506424 127508336 - MGP_BALBcJ_P0086728 protein_coding protein_coding MGP_BALBcJ_T0098650.1 MGP_BALBcJ_G0036704.1 mouse_genomes_project 7 117072330 117072451 - n-R5s157 rRNA rRNA MGP_BALBcJ_T0082591.1 MGP_BALBcJ_G0031909.1 mouse_genomes_project 7 26123518 26150882 + MGP_BALBcJ_P0082591 Zfp607a protein_coding protein_coding MGP_BALBcJ_T0011669.1 MGP_BALBcJ_G0009794.1 mouse_genomes_project 7 79056536 79056794 - Gm24224 misc_RNA misc_RNA MGP_BALBcJ_T0083509.1 MGP_BALBcJ_G0032122.1 mouse_genomes_project 7 42823024 42836669 + MGP_BALBcJ_P0083509 Zfp719 protein_coding protein_coding MGP_BALBcJ_T0083510.1 MGP_BALBcJ_G0032122.1 mouse_genomes_project 7 42823033 42833009 + MGP_BALBcJ_P0083510 Zfp719 protein_coding protein_coding MGP_BALBcJ_T0083511.1 MGP_BALBcJ_G0032122.1 mouse_genomes_project 7 42823053 42827942 + Zfp719 protein_coding retained_intron MGP_BALBcJ_T0018385.1 MGP_BALBcJ_G0015633.1 mouse_genomes_project 7 128928444 128930470 - Gm15503 processed_transcript retained_intron MGP_BALBcJ_T0018386.1 MGP_BALBcJ_G0015633.1 mouse_genomes_project 7 128929896 128931818 - Gm15503 processed_transcript sense_intronic MGP_BALBcJ_T0082950.1 MGP_BALBcJ_G0032001.1 mouse_genomes_project 7 28796082 28799919 + MGP_BALBcJ_P0082950 Tyrobp protein_coding protein_coding MGP_BALBcJ_T0087569.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141998289 142002005 - MGP_BALBcJ_P0087569 Irf7 protein_coding protein_coding MGP_BALBcJ_T0087570.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141998766 142002065 - MGP_BALBcJ_P0087570 Irf7 protein_coding protein_coding MGP_BALBcJ_T0087571.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141998767 142002007 - MGP_BALBcJ_P0087571 Irf7 protein_coding protein_coding MGP_BALBcJ_T0087572.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141998770 142002006 - Irf7 protein_coding retained_intron MGP_BALBcJ_T0087573.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141999015 142000876 - MGP_BALBcJ_P0087573 Irf7 protein_coding protein_coding MGP_BALBcJ_T0087574.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141999374 142000715 - Irf7 protein_coding retained_intron MGP_BALBcJ_T0087575.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141999556 142001628 - Irf7 protein_coding processed_transcript MGP_BALBcJ_T0087576.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 141999806 142001057 - Irf7 protein_coding retained_intron MGP_BALBcJ_T0087577.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 142000383 142001291 - Irf7 protein_coding retained_intron MGP_BALBcJ_T0087578.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 142000798 142001568 - Irf7 protein_coding retained_intron MGP_BALBcJ_T0087579.1 MGP_BALBcJ_G0033202.1 mouse_genomes_project 7 142000959 142002005 - Irf7 protein_coding processed_transcript MGP_BALBcJ_T0084427.1 MGP_BALBcJ_G0032353.1 mouse_genomes_project 7 67546548 67823076 + MGP_BALBcJ_P0084427 Igf1r protein_coding protein_coding MGP_BALBcJ_T0002202.1 MGP_BALBcJ_G0002114.1 mouse_genomes_project 7 34028603 34029358 + TEC TEC MGP_BALBcJ_T0084286.1 MGP_BALBcJ_G0032327.1 mouse_genomes_project 7 63956745 63984459 - MGP_BALBcJ_P0084286 Fan1 protein_coding protein_coding MGP_BALBcJ_T0084287.1 MGP_BALBcJ_G0032327.1 mouse_genomes_project 7 63971869 63983752 - Fan1 protein_coding retained_intron MGP_BALBcJ_T0084288.1 MGP_BALBcJ_G0032327.1 mouse_genomes_project 7 63980531 63984474 - Fan1 protein_coding retained_intron MGP_BALBcJ_T0084289.1 MGP_BALBcJ_G0032327.1 mouse_genomes_project 7 63981290 63984420 - Fan1 protein_coding retained_intron MGP_BALBcJ_T0015770.1 MGP_BALBcJ_G0013867.1 mouse_genomes_project 7 41484800 41484922 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009000.1 MGP_BALBcJ_G0007246.1 mouse_genomes_project 7 127288465 127297000 - lincRNA lincRNA MGP_BALBcJ_T0085439.1 MGP_BALBcJ_G0032589.1 mouse_genomes_project 7 102145566 102155270 + MGP_BALBcJ_P0085439 Art1 protein_coding protein_coding MGP_BALBcJ_T0082201.1 MGP_BALBcJ_G0031816.1 mouse_genomes_project 7 22525049 22533443 + MGP_BALBcJ_P0082201 Zfp428 protein_coding protein_coding MGP_BALBcJ_T0082202.1 MGP_BALBcJ_G0031816.1 mouse_genomes_project 7 22525113 22533706 + MGP_BALBcJ_P0082202 Zfp428 protein_coding protein_coding MGP_BALBcJ_T0082203.1 MGP_BALBcJ_G0031816.1 mouse_genomes_project 7 22525142 22533127 + MGP_BALBcJ_P0082203 Zfp428 protein_coding protein_coding MGP_BALBcJ_T0082204.1 MGP_BALBcJ_G0031816.1 mouse_genomes_project 7 22525173 22533704 + MGP_BALBcJ_P0082204 Zfp428 protein_coding protein_coding MGP_BALBcJ_T0085127.1 MGP_BALBcJ_G0032522.1 mouse_genomes_project 7 98138506 98227704 - MGP_BALBcJ_P0085127 Acer3 protein_coding protein_coding MGP_BALBcJ_T0085128.1 MGP_BALBcJ_G0032522.1 mouse_genomes_project 7 98141140 98227782 - MGP_BALBcJ_P0085128 Acer3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085129.1 MGP_BALBcJ_G0032522.1 mouse_genomes_project 7 98147625 98151568 - Acer3 protein_coding retained_intron MGP_BALBcJ_T0085130.1 MGP_BALBcJ_G0032522.1 mouse_genomes_project 7 98174373 98227760 - MGP_BALBcJ_P0085130 Acer3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084921.1 MGP_BALBcJ_G0032471.1 mouse_genomes_project 7 86555345 86560270 + MGP_BALBcJ_P0084921 Olfr292 protein_coding protein_coding MGP_BALBcJ_T0086949.1 MGP_BALBcJ_G0033044.1 mouse_genomes_project 7 128382984 128388114 - MGP_BALBcJ_P0086949 Prss53 protein_coding protein_coding MGP_BALBcJ_T0086950.1 MGP_BALBcJ_G0033044.1 mouse_genomes_project 7 128383236 128388111 - MGP_BALBcJ_P0086950 Prss53 protein_coding protein_coding MGP_BALBcJ_T0086914.1 MGP_BALBcJ_G0033038.1 mouse_genomes_project 7 128279040 128297298 + MGP_BALBcJ_P0086914 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086915.1 MGP_BALBcJ_G0033038.1 mouse_genomes_project 7 128292872 128295518 + MGP_BALBcJ_P0086915 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083733.1 MGP_BALBcJ_G0032175.1 mouse_genomes_project 7 44242863 44255969 - MGP_BALBcJ_P0083733 Med25 protein_coding protein_coding MGP_BALBcJ_T0011683.1 MGP_BALBcJ_G0009808.1 mouse_genomes_project 7 144038303 144038498 + Gm27389 misc_RNA misc_RNA MGP_BALBcJ_T0086242.1 MGP_BALBcJ_G0032915.1 mouse_genomes_project 7 120675928 120719870 + Abca14 protein_coding processed_transcript MGP_BALBcJ_T0086243.1 MGP_BALBcJ_G0032915.1 mouse_genomes_project 7 120675931 120793040 + MGP_BALBcJ_P0086243 Abca14 protein_coding protein_coding MGP_BALBcJ_T0086244.1 MGP_BALBcJ_G0032915.1 mouse_genomes_project 7 120675971 120684858 + Abca14 protein_coding retained_intron MGP_BALBcJ_T0086245.1 MGP_BALBcJ_G0032915.1 mouse_genomes_project 7 120675974 120688160 + Abca14 protein_coding processed_transcript MGP_BALBcJ_T0081548.1 MGP_BALBcJ_G0031587.1 mouse_genomes_project 7 3539540 3540601 + MGP_BALBcJ_P0081548 Olfr1344 protein_coding protein_coding MGP_BALBcJ_T0082896.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619048 28620126 + MGP_BALBcJ_P0082896 Polr2i protein_coding protein_coding MGP_BALBcJ_T0082897.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619064 28620116 + MGP_BALBcJ_P0082897 Polr2i protein_coding protein_coding MGP_BALBcJ_T0082898.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619064 28620117 + MGP_BALBcJ_P0082898 Polr2i protein_coding protein_coding MGP_BALBcJ_T0082899.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619074 28620114 + Polr2i protein_coding retained_intron MGP_BALBcJ_T0082900.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619082 28620056 + Polr2i protein_coding retained_intron MGP_BALBcJ_T0082901.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619335 28620118 + Polr2i protein_coding processed_transcript MGP_BALBcJ_T0082902.1 MGP_BALBcJ_G0031991.1 mouse_genomes_project 7 28619664 28620113 + Polr2i protein_coding retained_intron MGP_BALBcJ_T0084063.1 MGP_BALBcJ_G0032267.1 mouse_genomes_project 7 46318530 46352963 - MGP_BALBcJ_P0084063 Tsg101 protein_coding protein_coding MGP_BALBcJ_T0084064.1 MGP_BALBcJ_G0032267.1 mouse_genomes_project 7 46318608 46323815 - Tsg101 protein_coding processed_transcript MGP_BALBcJ_T0084065.1 MGP_BALBcJ_G0032267.1 mouse_genomes_project 7 46334145 46347407 - MGP_BALBcJ_P0084065 Tsg101 protein_coding protein_coding MGP_BALBcJ_T0084066.1 MGP_BALBcJ_G0032267.1 mouse_genomes_project 7 46339680 46342137 - Tsg101 protein_coding retained_intron MGP_BALBcJ_T0084067.1 MGP_BALBcJ_G0032267.1 mouse_genomes_project 7 46340142 46352931 - MGP_BALBcJ_P0084067 Tsg101 protein_coding protein_coding MGP_BALBcJ_T0086018.1 MGP_BALBcJ_G0032867.1 mouse_genomes_project 7 114444529 114518799 - MGP_BALBcJ_P0086018 Rras2 protein_coding protein_coding MGP_BALBcJ_T0015876.1 MGP_BALBcJ_G0013973.1 mouse_genomes_project 7 121700741 121701483 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085783.1 MGP_BALBcJ_G0032780.1 mouse_genomes_project 7 107463804 107496271 + MGP_BALBcJ_P0085783 Nlrp14 protein_coding protein_coding MGP_BALBcJ_T0085784.1 MGP_BALBcJ_G0032780.1 mouse_genomes_project 7 107485304 107496280 + MGP_BALBcJ_P0085784 Nlrp14 protein_coding protein_coding MGP_BALBcJ_T0082418.1 MGP_BALBcJ_G0031864.1 mouse_genomes_project 7 23917318 23932752 - MGP_BALBcJ_P0082418 Cyp2s1 protein_coding protein_coding MGP_BALBcJ_T0082419.1 MGP_BALBcJ_G0031864.1 mouse_genomes_project 7 23917318 23932492 - MGP_BALBcJ_P0082419 Cyp2s1 protein_coding protein_coding MGP_BALBcJ_T0082420.1 MGP_BALBcJ_G0031864.1 mouse_genomes_project 7 23918991 23932397 - Cyp2s1 protein_coding retained_intron MGP_BALBcJ_T0082421.1 MGP_BALBcJ_G0031864.1 mouse_genomes_project 7 23924135 23931231 - MGP_BALBcJ_P0082421 Cyp2s1 protein_coding protein_coding MGP_BALBcJ_T0084705.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096053 80106140 - MGP_BALBcJ_P0084705 Fes protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084706.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096055 80098733 - Fes protein_coding retained_intron MGP_BALBcJ_T0084707.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096055 80097927 - MGP_BALBcJ_P0084707 Fes protein_coding protein_coding MGP_BALBcJ_T0084708.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096055 80106150 - MGP_BALBcJ_P0084708 Fes protein_coding protein_coding MGP_BALBcJ_T0084709.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096060 80106075 - MGP_BALBcJ_P0084709 Fes protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084710.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096061 80106145 - MGP_BALBcJ_P0084710 Fes protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084711.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80096070 80105625 - MGP_BALBcJ_P0084711 Fes protein_coding protein_coding MGP_BALBcJ_T0084712.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80102505 80106099 - MGP_BALBcJ_P0084712 Fes protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084713.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80105119 80106085 - MGP_BALBcJ_P0084713 Fes protein_coding protein_coding MGP_BALBcJ_T0084714.1 MGP_BALBcJ_G0032405.1 mouse_genomes_project 7 80105245 80106098 - Fes protein_coding retained_intron MGP_BALBcJ_T0086182.1 MGP_BALBcJ_G0032897.1 mouse_genomes_project 7 119893934 119911025 - MGP_BALBcJ_P0086182 Gp2 protein_coding protein_coding MGP_BALBcJ_T0087827.1 MGP_BALBcJ_G0033247.1 mouse_genomes_project 7 143591716 143607302 + MGP_BALBcJ_P0087827 protein_coding protein_coding MGP_BALBcJ_T0087828.1 MGP_BALBcJ_G0033247.1 mouse_genomes_project 7 143604319 143606501 + protein_coding processed_transcript MGP_BALBcJ_T0082956.1 MGP_BALBcJ_G0032004.1 mouse_genomes_project 7 28817214 28827869 - MGP_BALBcJ_P0082956 Aplp1 protein_coding protein_coding MGP_BALBcJ_T0009012.1 MGP_BALBcJ_G0007251.1 mouse_genomes_project 7 127930002 127934899 + Gm45184 lincRNA lincRNA MGP_BALBcJ_T0015840.1 MGP_BALBcJ_G0013937.1 mouse_genomes_project 7 95344195 95345643 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084480.1 MGP_BALBcJ_G0032366.1 mouse_genomes_project 7 75520434 75570152 + MGP_BALBcJ_P0084480 Klhl25 protein_coding protein_coding MGP_BALBcJ_T0084481.1 MGP_BALBcJ_G0032366.1 mouse_genomes_project 7 75520462 75570151 + MGP_BALBcJ_P0084481 Klhl25 protein_coding protein_coding MGP_BALBcJ_T0084482.1 MGP_BALBcJ_G0032366.1 mouse_genomes_project 7 75520465 75547597 + MGP_BALBcJ_P0084482 Klhl25 protein_coding protein_coding MGP_BALBcJ_T0084483.1 MGP_BALBcJ_G0032366.1 mouse_genomes_project 7 75520488 75547593 + MGP_BALBcJ_P0084483 Klhl25 protein_coding protein_coding MGP_BALBcJ_T0084484.1 MGP_BALBcJ_G0032366.1 mouse_genomes_project 7 75520521 75569546 + Klhl25 protein_coding processed_transcript MGP_BALBcJ_T0084485.1 MGP_BALBcJ_G0032366.1 mouse_genomes_project 7 75520565 75545733 + MGP_BALBcJ_P0084485 Klhl25 protein_coding protein_coding MGP_BALBcJ_T0102801.1 MGP_BALBcJ_G0040616.1 mouse_genomes_project 7 86184308 86184936 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082034.1 MGP_BALBcJ_G0031761.1 mouse_genomes_project 7 17358151 17360669 - MGP_BALBcJ_P0082034 Bloc1s3 protein_coding protein_coding MGP_BALBcJ_T0015906.1 MGP_BALBcJ_G0014003.1 mouse_genomes_project 7 140413478 140414011 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081570.1 MGP_BALBcJ_G0031601.1 mouse_genomes_project 7 4249804 4262037 + MGP_BALBcJ_P0081570 Zfp418 protein_coding protein_coding MGP_BALBcJ_T0010864.1 MGP_BALBcJ_G0008989.1 mouse_genomes_project 7 61231181 61231247 - Mir344e miRNA miRNA MGP_BALBcJ_T0081535.1 MGP_BALBcJ_G0031582.1 mouse_genomes_project 7 3409409 3424877 - MGP_BALBcJ_P0081535 Zfp583 protein_coding protein_coding MGP_BALBcJ_T0081536.1 MGP_BALBcJ_G0031582.1 mouse_genomes_project 7 3410025 3424026 - MGP_BALBcJ_P0081536 Zfp583 protein_coding protein_coding MGP_BALBcJ_T0081537.1 MGP_BALBcJ_G0031582.1 mouse_genomes_project 7 3410054 3422855 - MGP_BALBcJ_P0081537 Zfp583 protein_coding protein_coding MGP_BALBcJ_T0081538.1 MGP_BALBcJ_G0031582.1 mouse_genomes_project 7 3411378 3424842 - Zfp583 protein_coding processed_transcript MGP_BALBcJ_T0081539.1 MGP_BALBcJ_G0031582.1 mouse_genomes_project 7 3416785 3424796 - Zfp583 protein_coding processed_transcript MGP_BALBcJ_T0081540.1 MGP_BALBcJ_G0031582.1 mouse_genomes_project 7 3417239 3424870 - MGP_BALBcJ_P0081540 Zfp583 protein_coding protein_coding MGP_BALBcJ_T0005278.1 MGP_BALBcJ_G0004479.1 mouse_genomes_project 7 129249196 129250325 + Gm44674 antisense antisense MGP_BALBcJ_T0005197.1 MGP_BALBcJ_G0004421.1 mouse_genomes_project 7 55805322 55806298 - Gm44506 antisense antisense MGP_BALBcJ_T0008995.1 MGP_BALBcJ_G0007242.1 mouse_genomes_project 7 125884478 125885612 - Gm44766 lincRNA lincRNA MGP_BALBcJ_T0015794.1 MGP_BALBcJ_G0013891.1 mouse_genomes_project 7 58338323 58339469 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085396.1 MGP_BALBcJ_G0032579.1 mouse_genomes_project 7 101940706 101946119 - MGP_BALBcJ_P0085396 Tomt protein_coding protein_coding MGP_BALBcJ_T0085398.1 MGP_BALBcJ_G0032579.1 mouse_genomes_project 7 101942151 101948693 - MGP_BALBcJ_P0085398 Tomt protein_coding protein_coding MGP_BALBcJ_T0082948.1 MGP_BALBcJ_G0031999.1 mouse_genomes_project 7 28707298 28709017 + MGP_BALBcJ_P0082948 E130208F15Rik protein_coding protein_coding MGP_BALBcJ_T0083958.1 MGP_BALBcJ_G0032240.1 mouse_genomes_project 7 45213352 45223123 - MGP_BALBcJ_P0083958 Kcnj14 protein_coding protein_coding MGP_BALBcJ_T0005200.1 MGP_BALBcJ_G0004424.1 mouse_genomes_project 7 65683185 65747497 - Gm26827 antisense antisense MGP_BALBcJ_T0005293.1 MGP_BALBcJ_G0004489.1 mouse_genomes_project 7 143893347 143898925 - Gm28821 antisense antisense MGP_BALBcJ_T0087956.1 MGP_BALBcJ_G0033276.1 mouse_genomes_project 7 145686230 145690745 + MGP_BALBcJ_P0087956 Fgf15 protein_coding protein_coding MGP_BALBcJ_T0083734.1 MGP_BALBcJ_G0032176.1 mouse_genomes_project 7 44259651 44264213 + MGP_BALBcJ_P0083734 Fuz protein_coding protein_coding MGP_BALBcJ_T0002250.1 MGP_BALBcJ_G0002162.1 mouse_genomes_project 7 73366036 73369132 - TEC TEC MGP_BALBcJ_T0002251.1 MGP_BALBcJ_G0002162.1 mouse_genomes_project 7 73367000 73369025 - TEC TEC MGP_BALBcJ_T0005256.1 MGP_BALBcJ_G0004462.1 mouse_genomes_project 7 121343368 121345991 - antisense antisense MGP_BALBcJ_T0008981.1 MGP_BALBcJ_G0007232.1 mouse_genomes_project 7 116994694 116997391 + 4732496C06Rik lincRNA lincRNA MGP_BALBcJ_T0082667.1 MGP_BALBcJ_G0031934.1 mouse_genomes_project 7 26794530 26796142 - MGP_BALBcJ_P0082667 protein_coding protein_coding MGP_BALBcJ_T0081522.1 MGP_BALBcJ_G0031578.1 mouse_genomes_project 7 3270486 3288800 + MGP_BALBcJ_P0081522 Galp protein_coding protein_coding MGP_BALBcJ_T0081523.1 MGP_BALBcJ_G0031578.1 mouse_genomes_project 7 3275532 3284089 + Galp protein_coding processed_transcript MGP_BALBcJ_T0005188.1 MGP_BALBcJ_G0004415.1 mouse_genomes_project 7 43712537 43713262 + Gm44780 antisense antisense MGP_BALBcJ_T0015745.1 MGP_BALBcJ_G0013842.1 mouse_genomes_project 7 32296097 32296565 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018377.1 MGP_BALBcJ_G0015628.1 mouse_genomes_project 7 127254345 127264041 - Gm9967 processed_transcript antisense MGP_BALBcJ_T0018378.1 MGP_BALBcJ_G0015628.1 mouse_genomes_project 7 127260216 127264029 - Gm9967 processed_transcript antisense MGP_BALBcJ_T0018379.1 MGP_BALBcJ_G0015628.1 mouse_genomes_project 7 127262227 127264081 - Gm9967 processed_transcript retained_intron MGP_BALBcJ_T0082397.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23825990 23833973 - MGP_BALBcJ_P0082397 Ccdc97 protein_coding protein_coding MGP_BALBcJ_T0082398.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23827819 23830991 - Ccdc97 protein_coding processed_transcript MGP_BALBcJ_T0082399.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23829018 23833888 - Ccdc97 protein_coding retained_intron MGP_BALBcJ_T0082400.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23829706 23833930 - MGP_BALBcJ_P0082400 Ccdc97 protein_coding protein_coding MGP_BALBcJ_T0082401.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23829794 23831279 - Ccdc97 protein_coding retained_intron MGP_BALBcJ_T0082402.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23830788 23833891 - Ccdc97 protein_coding processed_transcript MGP_BALBcJ_T0082403.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23830788 23833876 - Ccdc97 protein_coding processed_transcript MGP_BALBcJ_T0082404.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23831025 23833940 - Ccdc97 protein_coding processed_transcript MGP_BALBcJ_T0082405.1 MGP_BALBcJ_G0031861.1 mouse_genomes_project 7 23831790 23833952 - Ccdc97 protein_coding processed_transcript MGP_BALBcJ_T0015795.1 MGP_BALBcJ_G0013892.1 mouse_genomes_project 7 61038712 61039171 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081408.1 MGP_BALBcJ_G0031536.1 mouse_genomes_project 7 1634227 1660570 - MGP_BALBcJ_P0081408 Hspbp1 protein_coding protein_coding MGP_BALBcJ_T0081409.1 MGP_BALBcJ_G0031536.1 mouse_genomes_project 7 1635840 1638302 - MGP_BALBcJ_P0081409 Hspbp1 protein_coding protein_coding MGP_BALBcJ_T0081410.1 MGP_BALBcJ_G0031536.1 mouse_genomes_project 7 1637872 1638467 - Hspbp1 protein_coding processed_transcript MGP_BALBcJ_T0081411.1 MGP_BALBcJ_G0031536.1 mouse_genomes_project 7 1638279 1660496 - MGP_BALBcJ_P0081411 Hspbp1 protein_coding protein_coding MGP_BALBcJ_T0081412.1 MGP_BALBcJ_G0031536.1 mouse_genomes_project 7 1652493 1660163 - MGP_BALBcJ_P0081412 Hspbp1 protein_coding protein_coding MGP_BALBcJ_T0081413.1 MGP_BALBcJ_G0031536.1 mouse_genomes_project 7 1652493 1660483 - MGP_BALBcJ_P0081413 Hspbp1 protein_coding protein_coding MGP_BALBcJ_T0086969.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434585 128437511 - MGP_BALBcJ_P0086969 Prss36 protein_coding unknown_likely_coding MGP_BALBcJ_T0086970.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434593 128437475 - Prss36 protein_coding processed_transcript MGP_BALBcJ_T0086971.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434593 128437435 - Prss36 protein_coding processed_transcript MGP_BALBcJ_T0086972.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434593 128451728 - MGP_BALBcJ_P0086972 Prss36 protein_coding protein_coding MGP_BALBcJ_T0086973.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434593 128451728 - MGP_BALBcJ_P0086973 Prss36 protein_coding protein_coding MGP_BALBcJ_T0086974.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434754 128437406 - MGP_BALBcJ_P0086974 Prss36 protein_coding protein_coding MGP_BALBcJ_T0086975.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434857 128437385 - MGP_BALBcJ_P0086975 Prss36 protein_coding protein_coding MGP_BALBcJ_T0086976.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434915 128438053 - Prss36 protein_coding retained_intron MGP_BALBcJ_T0086977.1 MGP_BALBcJ_G0033050.1 mouse_genomes_project 7 128434962 128437470 - Prss36 protein_coding processed_transcript MGP_BALBcJ_T0087432.1 MGP_BALBcJ_G0033151.1 mouse_genomes_project 7 140846019 140847095 - MGP_BALBcJ_P0087432 Olfr522 protein_coding protein_coding MGP_BALBcJ_T0086732.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127508549 127512230 - MGP_BALBcJ_P0086732 Prrt2 protein_coding protein_coding MGP_BALBcJ_T0086733.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127508561 127511993 - Prrt2 protein_coding retained_intron MGP_BALBcJ_T0086734.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127508666 127510921 - MGP_BALBcJ_P0086734 Prrt2 protein_coding protein_coding MGP_BALBcJ_T0086735.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127509176 127510614 - MGP_BALBcJ_P0086735 Prrt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086736.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127509525 127511975 - Prrt2 protein_coding processed_transcript MGP_BALBcJ_T0086737.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127509722 127512156 - MGP_BALBcJ_P0086737 Prrt2 protein_coding protein_coding MGP_BALBcJ_T0086738.1 MGP_BALBcJ_G0033004.1 mouse_genomes_project 7 127510413 127511374 - Prrt2 protein_coding processed_transcript MGP_BALBcJ_T0005164.1 MGP_BALBcJ_G0004399.1 mouse_genomes_project 7 29271059 29271660 + Gm29439 antisense antisense MGP_BALBcJ_T0002307.1 MGP_BALBcJ_G0002218.1 mouse_genomes_project 7 128293575 128296258 - TEC TEC MGP_BALBcJ_T0081586.1 MGP_BALBcJ_G0031613.1 mouse_genomes_project 7 9076786 9077698 + MGP_BALBcJ_P0081586 Vmn1r73 protein_coding protein_coding MGP_BALBcJ_T0085825.1 MGP_BALBcJ_G0032815.1 mouse_genomes_project 7 108971108 108972183 - MGP_BALBcJ_P0085825 Olfr509 protein_coding protein_coding MGP_BALBcJ_T0081620.1 MGP_BALBcJ_G0031633.1 mouse_genomes_project 7 10247214 10257639 + MGP_BALBcJ_P0081620 Zscan22 protein_coding protein_coding MGP_BALBcJ_T0081621.1 MGP_BALBcJ_G0031633.1 mouse_genomes_project 7 10247235 10258483 + MGP_BALBcJ_P0081621 Zscan22 protein_coding protein_coding MGP_BALBcJ_T0081622.1 MGP_BALBcJ_G0031633.1 mouse_genomes_project 7 10247240 10256937 + MGP_BALBcJ_P0081622 Zscan22 protein_coding protein_coding MGP_BALBcJ_T0081623.1 MGP_BALBcJ_G0031633.1 mouse_genomes_project 7 10247266 10257642 + MGP_BALBcJ_P0081623 Zscan22 protein_coding protein_coding MGP_BALBcJ_T0083524.1 MGP_BALBcJ_G0032129.1 mouse_genomes_project 7 43015027 43019716 + MGP_BALBcJ_P0083524 Klk12 protein_coding protein_coding MGP_BALBcJ_T0083525.1 MGP_BALBcJ_G0032129.1 mouse_genomes_project 7 43015230 43019606 + MGP_BALBcJ_P0083525 Klk12 protein_coding protein_coding MGP_BALBcJ_T0015797.1 MGP_BALBcJ_G0013894.1 mouse_genomes_project 7 62039714 62040023 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085228.1 MGP_BALBcJ_G0032550.1 mouse_genomes_project 7 100179584 100231191 + MGP_BALBcJ_P0085228 Pgm2l1 protein_coding protein_coding MGP_BALBcJ_T0085229.1 MGP_BALBcJ_G0032550.1 mouse_genomes_project 7 100179878 100233254 + MGP_BALBcJ_P0085229 Pgm2l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085230.1 MGP_BALBcJ_G0032550.1 mouse_genomes_project 7 100179900 100234713 + MGP_BALBcJ_P0085230 Pgm2l1 protein_coding protein_coding MGP_BALBcJ_T0084866.1 MGP_BALBcJ_G0032440.1 mouse_genomes_project 7 83397729 83408076 + MGP_BALBcJ_P0084866 Stard5 protein_coding protein_coding MGP_BALBcJ_T0084867.1 MGP_BALBcJ_G0032440.1 mouse_genomes_project 7 83397770 83399235 + Stard5 protein_coding retained_intron MGP_BALBcJ_T0084868.1 MGP_BALBcJ_G0032440.1 mouse_genomes_project 7 83397770 83418907 + MGP_BALBcJ_P0084868 Stard5 protein_coding protein_coding MGP_BALBcJ_T0084869.1 MGP_BALBcJ_G0032440.1 mouse_genomes_project 7 83397786 83403839 + Stard5 protein_coding retained_intron MGP_BALBcJ_T0084870.1 MGP_BALBcJ_G0032440.1 mouse_genomes_project 7 83398316 83399119 + Stard5 protein_coding processed_transcript MGP_BALBcJ_T0086339.1 MGP_BALBcJ_G0032940.1 mouse_genomes_project 7 122626233 122642727 + MGP_BALBcJ_P0086339 Dctn5 protein_coding protein_coding MGP_BALBcJ_T0086340.1 MGP_BALBcJ_G0032940.1 mouse_genomes_project 7 122626246 122642727 + Dctn5 protein_coding retained_intron MGP_BALBcJ_T0086341.1 MGP_BALBcJ_G0032940.1 mouse_genomes_project 7 122626264 122628327 + MGP_BALBcJ_P0086341 Dctn5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086342.1 MGP_BALBcJ_G0032940.1 mouse_genomes_project 7 122637005 122642264 + MGP_BALBcJ_P0086342 Dctn5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085501.1 MGP_BALBcJ_G0032622.1 mouse_genomes_project 7 103021979 103023020 + MGP_BALBcJ_P0085501 Olfr574 protein_coding protein_coding MGP_BALBcJ_T0008905.1 MGP_BALBcJ_G0007189.1 mouse_genomes_project 7 73665924 73674948 - Gm45004 lincRNA lincRNA MGP_BALBcJ_T0085622.1 MGP_BALBcJ_G0032709.1 mouse_genomes_project 7 104668682 104676467 - MGP_BALBcJ_P0085622 protein_coding protein_coding MGP_BALBcJ_T0081555.1 MGP_BALBcJ_G0031594.1 mouse_genomes_project 7 3663287 3664214 + MGP_BALBcJ_P0081555 Olfr1350 protein_coding protein_coding MGP_BALBcJ_T0101357.1 MGP_BALBcJ_G0039393.1 mouse_genomes_project 7 118614405 118614536 + Gm25683 snoRNA snoRNA MGP_BALBcJ_T0085558.1 MGP_BALBcJ_G0032674.1 mouse_genomes_project 7 104093694 104094648 + MGP_BALBcJ_P0085558 Olfr632 protein_coding protein_coding MGP_BALBcJ_T0086301.1 MGP_BALBcJ_G0032933.1 mouse_genomes_project 7 122350028 122404452 + MGP_BALBcJ_P0086301 Scnn1b protein_coding protein_coding MGP_BALBcJ_T0086302.1 MGP_BALBcJ_G0032933.1 mouse_genomes_project 7 122350067 122404454 + MGP_BALBcJ_P0086302 Scnn1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086305.1 MGP_BALBcJ_G0032933.1 mouse_genomes_project 7 122384777 122397786 + MGP_BALBcJ_P0086305 Scnn1b protein_coding protein_coding MGP_BALBcJ_T0015908.1 MGP_BALBcJ_G0014005.1 mouse_genomes_project 7 140468372 140468787 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087696.1 MGP_BALBcJ_G0033221.1 mouse_genomes_project 7 142376004 142397801 - MGP_BALBcJ_P0087696 Muc6 protein_coding protein_coding MGP_BALBcJ_T0087697.1 MGP_BALBcJ_G0033221.1 mouse_genomes_project 7 142376522 142397801 - MGP_BALBcJ_P0087697 Muc6 protein_coding protein_coding MGP_BALBcJ_T0087698.1 MGP_BALBcJ_G0033221.1 mouse_genomes_project 7 142376527 142397874 - MGP_BALBcJ_P0087698 Muc6 protein_coding protein_coding MGP_BALBcJ_T0084912.1 MGP_BALBcJ_G0032462.1 mouse_genomes_project 7 86218019 86219021 - MGP_BALBcJ_P0084912 Olfr304 protein_coding protein_coding MGP_BALBcJ_T0083573.1 MGP_BALBcJ_G0032147.1 mouse_genomes_project 7 43603662 43607952 - MGP_BALBcJ_P0083573 Acpt protein_coding protein_coding MGP_BALBcJ_T0083574.1 MGP_BALBcJ_G0032147.1 mouse_genomes_project 7 43603669 43607779 - MGP_BALBcJ_P0083574 Acpt protein_coding protein_coding MGP_BALBcJ_T0085637.1 MGP_BALBcJ_G0032723.1 mouse_genomes_project 7 105161274 105162213 + MGP_BALBcJ_P0085637 Olfr677 protein_coding protein_coding MGP_BALBcJ_T0008823.1 MGP_BALBcJ_G0007127.1 mouse_genomes_project 7 35925210 35928577 - Gm28076 lincRNA lincRNA MGP_BALBcJ_T0010899.1 MGP_BALBcJ_G0009024.1 mouse_genomes_project 7 126842826 126842901 - Mir7058 miRNA miRNA MGP_BALBcJ_T0084165.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55359577 55398678 + MGP_BALBcJ_P0084165 Tubgcp5 protein_coding protein_coding MGP_BALBcJ_T0084166.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55359588 55394096 + Tubgcp5 protein_coding retained_intron MGP_BALBcJ_T0084167.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55359591 55398447 + MGP_BALBcJ_P0084167 Tubgcp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084168.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55359615 55398447 + MGP_BALBcJ_P0084168 Tubgcp5 protein_coding protein_coding MGP_BALBcJ_T0084169.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55359649 55364336 + MGP_BALBcJ_P0084169 Tubgcp5 protein_coding protein_coding MGP_BALBcJ_T0084170.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55370048 55374373 + Tubgcp5 protein_coding retained_intron MGP_BALBcJ_T0084171.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55371701 55384338 + Tubgcp5 protein_coding retained_intron MGP_BALBcJ_T0084172.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55383885 55385610 + Tubgcp5 protein_coding retained_intron MGP_BALBcJ_T0084173.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55388228 55397936 + Tubgcp5 protein_coding retained_intron MGP_BALBcJ_T0084174.1 MGP_BALBcJ_G0032303.1 mouse_genomes_project 7 55393277 55398238 + MGP_BALBcJ_P0084174 Tubgcp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087963.1 MGP_BALBcJ_G0033278.1 mouse_genomes_project 7 145720152 145730078 - MGP_BALBcJ_P0087963 Ccnd1 protein_coding protein_coding MGP_BALBcJ_T0087964.1 MGP_BALBcJ_G0033278.1 mouse_genomes_project 7 145727501 145728404 - Ccnd1 protein_coding retained_intron MGP_BALBcJ_T0015706.1 MGP_BALBcJ_G0013803.1 mouse_genomes_project 7 14201547 14201662 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082114.1 MGP_BALBcJ_G0031785.1 mouse_genomes_project 7 17828618 17855005 + MGP_BALBcJ_P0082114 Ceacam20 protein_coding protein_coding MGP_BALBcJ_T0086570.1 MGP_BALBcJ_G0032979.1 mouse_genomes_project 7 127152397 127155853 - MGP_BALBcJ_P0086570 Sult1a1 protein_coding protein_coding MGP_BALBcJ_T0086571.1 MGP_BALBcJ_G0032979.1 mouse_genomes_project 7 127152403 127155892 - MGP_BALBcJ_P0086571 Sult1a1 protein_coding protein_coding MGP_BALBcJ_T0086572.1 MGP_BALBcJ_G0032979.1 mouse_genomes_project 7 127152404 127155892 - MGP_BALBcJ_P0086572 Sult1a1 protein_coding protein_coding MGP_BALBcJ_T0086573.1 MGP_BALBcJ_G0032979.1 mouse_genomes_project 7 127153801 127155910 - MGP_BALBcJ_P0086573 Sult1a1 protein_coding protein_coding MGP_BALBcJ_T0081860.1 MGP_BALBcJ_G0031705.1 mouse_genomes_project 7 14584505 14589446 + MGP_BALBcJ_P0081860 Ccdc8 protein_coding protein_coding MGP_BALBcJ_T0102728.1 MGP_BALBcJ_G0040543.1 mouse_genomes_project 7 32215338 32215707 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084997.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 90915743 92292131 + MGP_BALBcJ_P0084997 Dlg2 protein_coding protein_coding MGP_BALBcJ_T0084998.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 90915763 92132989 + Dlg2 protein_coding processed_transcript MGP_BALBcJ_T0084999.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 90915765 92292131 + MGP_BALBcJ_P0084999 Dlg2 protein_coding protein_coding MGP_BALBcJ_T0085000.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 91514851 91844853 + Dlg2 protein_coding retained_intron MGP_BALBcJ_T0085001.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 91553284 92292131 + MGP_BALBcJ_P0085001 Dlg2 protein_coding protein_coding MGP_BALBcJ_T0085002.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 91553535 91788245 + Dlg2 protein_coding processed_transcript MGP_BALBcJ_T0085003.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 91553537 92289744 + MGP_BALBcJ_P0085003 Dlg2 protein_coding unknown_likely_coding MGP_BALBcJ_T0085004.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 91921110 92292131 + MGP_BALBcJ_P0085004 Dlg2 protein_coding protein_coding MGP_BALBcJ_T0085005.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 92034521 92134707 + Dlg2 protein_coding retained_intron MGP_BALBcJ_T0085006.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 92081647 92291611 + Dlg2 protein_coding processed_transcript MGP_BALBcJ_T0085007.1 MGP_BALBcJ_G0032495.1 mouse_genomes_project 7 92081851 92276100 + Dlg2 protein_coding processed_transcript MGP_BALBcJ_T0081995.1 MGP_BALBcJ_G0031751.1 mouse_genomes_project 7 17148549 17155874 - MGP_BALBcJ_P0081995 Fosb protein_coding protein_coding MGP_BALBcJ_T0086043.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115157037 115204404 + MGP_BALBcJ_P0086043 Insc protein_coding protein_coding MGP_BALBcJ_T0086044.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115159083 115204682 + MGP_BALBcJ_P0086044 Insc protein_coding protein_coding MGP_BALBcJ_T0086045.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115159109 115264803 + MGP_BALBcJ_P0086045 Insc protein_coding protein_coding MGP_BALBcJ_T0086046.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115167066 115182470 + Insc protein_coding retained_intron MGP_BALBcJ_T0086047.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115181860 115264806 + MGP_BALBcJ_P0086047 Insc protein_coding protein_coding MGP_BALBcJ_T0086048.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115181898 115204441 + MGP_BALBcJ_P0086048 Insc protein_coding protein_coding MGP_BALBcJ_T0086049.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115184440 115204577 + Insc protein_coding processed_transcript MGP_BALBcJ_T0086050.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115205440 115264803 + Insc protein_coding retained_intron MGP_BALBcJ_T0086051.1 MGP_BALBcJ_G0032874.1 mouse_genomes_project 7 115207363 115243571 + MGP_BALBcJ_P0086051 Insc protein_coding protein_coding MGP_BALBcJ_T0085585.1 MGP_BALBcJ_G0032694.1 mouse_genomes_project 7 104393032 104408894 - protein_coding processed_transcript MGP_BALBcJ_T0085586.1 MGP_BALBcJ_G0032694.1 mouse_genomes_project 7 104393035 104422332 - MGP_BALBcJ_P0085586 protein_coding protein_coding MGP_BALBcJ_T0085587.1 MGP_BALBcJ_G0032694.1 mouse_genomes_project 7 104393035 104422333 - MGP_BALBcJ_P0085587 protein_coding protein_coding MGP_BALBcJ_T0085598.1 MGP_BALBcJ_G0032694.1 mouse_genomes_project 7 104411254 104422340 - MGP_BALBcJ_P0085598 protein_coding protein_coding MGP_BALBcJ_T0085600.1 MGP_BALBcJ_G0032694.1 mouse_genomes_project 7 104415033 104422220 - protein_coding processed_transcript MGP_BALBcJ_T0085601.1 MGP_BALBcJ_G0032694.1 mouse_genomes_project 7 104415915 104422343 - protein_coding retained_intron MGP_BALBcJ_T0085042.1 MGP_BALBcJ_G0032504.1 mouse_genomes_project 7 96992464 97204924 + MGP_BALBcJ_P0085042 Gab2 protein_coding protein_coding MGP_BALBcJ_T0085043.1 MGP_BALBcJ_G0032504.1 mouse_genomes_project 7 96992662 97201014 + MGP_BALBcJ_P0085043 Gab2 protein_coding protein_coding MGP_BALBcJ_T0010834.1 MGP_BALBcJ_G0008959.1 mouse_genomes_project 7 27361708 27361774 + Gm44408 miRNA miRNA MGP_BALBcJ_T0084005.1 MGP_BALBcJ_G0032253.1 mouse_genomes_project 7 45651440 45723471 + MGP_BALBcJ_P0084005 Otog protein_coding protein_coding MGP_BALBcJ_T0002293.1 MGP_BALBcJ_G0002204.1 mouse_genomes_project 7 122899768 122902918 + TEC TEC MGP_BALBcJ_T0087515.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141806242 141820311 + MGP_BALBcJ_P0087515 Pkp3 protein_coding protein_coding MGP_BALBcJ_T0087516.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141807171 141810671 + MGP_BALBcJ_P0087516 Pkp3 protein_coding protein_coding MGP_BALBcJ_T0087517.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141807784 141820311 + MGP_BALBcJ_P0087517 Pkp3 protein_coding protein_coding MGP_BALBcJ_T0087518.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141807799 141811146 + MGP_BALBcJ_P0087518 Pkp3 protein_coding protein_coding MGP_BALBcJ_T0087519.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141807804 141810720 + MGP_BALBcJ_P0087519 Pkp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087520.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141817561 141818678 + Pkp3 protein_coding retained_intron MGP_BALBcJ_T0087521.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141817946 141820308 + Pkp3 protein_coding retained_intron MGP_BALBcJ_T0087522.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141818008 141818649 + Pkp3 protein_coding retained_intron MGP_BALBcJ_T0087523.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141819211 141819717 + Pkp3 protein_coding retained_intron MGP_BALBcJ_T0087524.1 MGP_BALBcJ_G0033192.1 mouse_genomes_project 7 141819661 141820310 + MGP_BALBcJ_P0087524 Pkp3 protein_coding protein_coding MGP_BALBcJ_T0084130.1 MGP_BALBcJ_G0032292.1 mouse_genomes_project 7 49498061 49558190 + MGP_BALBcJ_P0084130 Slc6a5 protein_coding protein_coding MGP_BALBcJ_T0084131.1 MGP_BALBcJ_G0032292.1 mouse_genomes_project 7 49499615 49553844 + MGP_BALBcJ_P0084131 Slc6a5 protein_coding protein_coding MGP_BALBcJ_T0010890.1 MGP_BALBcJ_G0009015.1 mouse_genomes_project 7 100861871 100861975 - Mir3102 miRNA miRNA MGP_BALBcJ_T0082351.1 MGP_BALBcJ_G0031852.1 mouse_genomes_project 7 23461992 23475285 - MGP_BALBcJ_P0082351 Cxcl17 protein_coding protein_coding MGP_BALBcJ_T0082352.1 MGP_BALBcJ_G0031852.1 mouse_genomes_project 7 23461992 23475285 - MGP_BALBcJ_P0082352 Cxcl17 protein_coding protein_coding MGP_BALBcJ_T0085435.1 MGP_BALBcJ_G0032588.1 mouse_genomes_project 7 102140706 102146669 - MGP_BALBcJ_P0085435 Art5 protein_coding protein_coding MGP_BALBcJ_T0085436.1 MGP_BALBcJ_G0032588.1 mouse_genomes_project 7 102140707 102144057 - MGP_BALBcJ_P0085436 Art5 protein_coding protein_coding MGP_BALBcJ_T0085437.1 MGP_BALBcJ_G0032588.1 mouse_genomes_project 7 102140941 102143767 - MGP_BALBcJ_P0085437 Art5 protein_coding protein_coding MGP_BALBcJ_T0085438.1 MGP_BALBcJ_G0032588.1 mouse_genomes_project 7 102140941 102143321 - MGP_BALBcJ_P0085438 Art5 protein_coding protein_coding MGP_BALBcJ_T0005160.1 MGP_BALBcJ_G0004396.1 mouse_genomes_project 7 28957694 28958314 - antisense antisense MGP_BALBcJ_T0002318.1 MGP_BALBcJ_G0002229.1 mouse_genomes_project 7 144116266 144119758 - TEC TEC MGP_BALBcJ_T0102670.1 MGP_BALBcJ_G0040485.1 mouse_genomes_project 7 1238907 1252278 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082544.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25775356 25796798 - MGP_BALBcJ_P0082544 Pld3 protein_coding protein_coding MGP_BALBcJ_T0082545.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25775356 25796792 - MGP_BALBcJ_P0082545 Pld3 protein_coding protein_coding MGP_BALBcJ_T0082546.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25775551 25776103 - Pld3 protein_coding retained_intron MGP_BALBcJ_T0082547.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25776810 25781300 - Pld3 protein_coding retained_intron MGP_BALBcJ_T0082548.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25783010 25796596 - MGP_BALBcJ_P0082548 Pld3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082549.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25784578 25796764 - MGP_BALBcJ_P0082549 Pld3 protein_coding protein_coding MGP_BALBcJ_T0082550.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25785113 25786116 - MGP_BALBcJ_P0082550 Pld3 protein_coding protein_coding MGP_BALBcJ_T0082551.1 MGP_BALBcJ_G0031900.1 mouse_genomes_project 7 25786186 25796731 - Pld3 protein_coding processed_transcript MGP_BALBcJ_T0085096.1 MGP_BALBcJ_G0032515.1 mouse_genomes_project 7 97632768 97647078 - MGP_BALBcJ_P0085096 Aqp11 protein_coding protein_coding MGP_BALBcJ_T0085097.1 MGP_BALBcJ_G0032515.1 mouse_genomes_project 7 97635137 97646727 - MGP_BALBcJ_P0085097 Aqp11 protein_coding protein_coding MGP_BALBcJ_T0085098.1 MGP_BALBcJ_G0032515.1 mouse_genomes_project 7 97635305 97638149 - Aqp11 protein_coding retained_intron MGP_BALBcJ_T0085099.1 MGP_BALBcJ_G0032515.1 mouse_genomes_project 7 97636186 97642024 - Aqp11 protein_coding retained_intron MGP_BALBcJ_T0085100.1 MGP_BALBcJ_G0032515.1 mouse_genomes_project 7 97637811 97639266 - Aqp11 protein_coding processed_transcript MGP_BALBcJ_T0002265.1 MGP_BALBcJ_G0002176.1 mouse_genomes_project 7 78471554 78472631 - TEC TEC MGP_BALBcJ_T0081512.1 MGP_BALBcJ_G0031576.1 mouse_genomes_project 7 3202644 3227293 - MGP_BALBcJ_P0081512 Zfp787 protein_coding protein_coding MGP_BALBcJ_T0083477.1 MGP_BALBcJ_G0032114.1 mouse_genomes_project 7 42682484 42685037 + MGP_BALBcJ_P0083477 Cldnd2 protein_coding protein_coding MGP_BALBcJ_T0083478.1 MGP_BALBcJ_G0032114.1 mouse_genomes_project 7 42683278 42685002 + MGP_BALBcJ_P0083478 Cldnd2 protein_coding protein_coding MGP_BALBcJ_T0102779.1 MGP_BALBcJ_G0040594.1 mouse_genomes_project 7 84786141 84786661 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082315.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23322749 23352906 + MGP_BALBcJ_P0082315 Cic protein_coding protein_coding MGP_BALBcJ_T0082316.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23323432 23326318 + MGP_BALBcJ_P0082316 Cic protein_coding protein_coding MGP_BALBcJ_T0082317.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23333481 23342748 + Cic protein_coding processed_transcript MGP_BALBcJ_T0082318.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23334713 23342711 + Cic protein_coding processed_transcript MGP_BALBcJ_T0082319.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23337251 23352892 + MGP_BALBcJ_P0082319 Cic protein_coding protein_coding MGP_BALBcJ_T0082320.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23337251 23352895 + MGP_BALBcJ_P0082320 Cic protein_coding protein_coding MGP_BALBcJ_T0082321.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23340588 23349121 + MGP_BALBcJ_P0082321 Cic protein_coding protein_coding MGP_BALBcJ_T0082322.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23340995 23342974 + Cic protein_coding processed_transcript MGP_BALBcJ_T0082323.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23342448 23343463 + Cic protein_coding retained_intron MGP_BALBcJ_T0082324.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23343601 23352889 + Cic protein_coding retained_intron MGP_BALBcJ_T0082325.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23347041 23347485 + Cic protein_coding retained_intron MGP_BALBcJ_T0082326.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23348949 23352892 + MGP_BALBcJ_P0082326 Cic protein_coding protein_coding MGP_BALBcJ_T0082327.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23348986 23349857 + Cic protein_coding retained_intron MGP_BALBcJ_T0082328.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23349713 23350240 + Cic protein_coding retained_intron MGP_BALBcJ_T0082329.1 MGP_BALBcJ_G0031845.1 mouse_genomes_project 7 23350798 23352892 + MGP_BALBcJ_P0082329 Cic protein_coding protein_coding MGP_BALBcJ_T0086201.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120222162 120245875 + MGP_BALBcJ_P0086201 Acsm3 protein_coding protein_coding MGP_BALBcJ_T0086202.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120222162 120245879 + MGP_BALBcJ_P0086202 Acsm3 protein_coding protein_coding MGP_BALBcJ_T0086203.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120222163 120245877 + MGP_BALBcJ_P0086203 Acsm3 protein_coding protein_coding MGP_BALBcJ_T0086204.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120222163 120248499 + MGP_BALBcJ_P0086204 Acsm3 protein_coding protein_coding MGP_BALBcJ_T0086205.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120227395 120245882 + MGP_BALBcJ_P0086205 Acsm3 protein_coding protein_coding MGP_BALBcJ_T0086208.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120235612 120240244 + Acsm3 protein_coding retained_intron MGP_BALBcJ_T0086209.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120238120 120242005 + Acsm3 protein_coding retained_intron MGP_BALBcJ_T0086210.1 MGP_BALBcJ_G0032905.1 mouse_genomes_project 7 120241727 120242046 + Acsm3 protein_coding retained_intron MGP_BALBcJ_T0084083.1 MGP_BALBcJ_G0032278.1 mouse_genomes_project 7 47743210 47744247 - MGP_BALBcJ_P0084083 Mrgprb5 protein_coding protein_coding MGP_BALBcJ_T0005199.1 MGP_BALBcJ_G0004423.1 mouse_genomes_project 7 63947647 63956010 - Gm20457 antisense antisense MGP_BALBcJ_T0085514.1 MGP_BALBcJ_G0032634.1 mouse_genomes_project 7 103292292 103295033 + MGP_BALBcJ_P0085514 Olfr592 protein_coding protein_coding MGP_BALBcJ_T0085515.1 MGP_BALBcJ_G0032634.1 mouse_genomes_project 7 103294094 103295033 + MGP_BALBcJ_P0085515 Olfr592 protein_coding protein_coding MGP_BALBcJ_T0008988.1 MGP_BALBcJ_G0007238.1 mouse_genomes_project 7 125107299 125194465 - 3100003L05Rik lincRNA lincRNA MGP_BALBcJ_T0087709.1 MGP_BALBcJ_G0033224.1 mouse_genomes_project 7 142545084 142585343 + MGP_BALBcJ_P0087709 Muc5b protein_coding protein_coding MGP_BALBcJ_T0102826.1 MGP_BALBcJ_G0040641.1 mouse_genomes_project 7 105952491 106918681 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082136.1 MGP_BALBcJ_G0031800.1 mouse_genomes_project 7 22088809 22104314 + MGP_BALBcJ_P0082136 Zfp112 protein_coding protein_coding MGP_BALBcJ_T0082137.1 MGP_BALBcJ_G0031800.1 mouse_genomes_project 7 22088817 22103855 + MGP_BALBcJ_P0082137 Zfp112 protein_coding protein_coding MGP_BALBcJ_T0082138.1 MGP_BALBcJ_G0031800.1 mouse_genomes_project 7 22088853 22090964 + Zfp112 protein_coding retained_intron MGP_BALBcJ_T0082139.1 MGP_BALBcJ_G0031800.1 mouse_genomes_project 7 22094857 22103598 + MGP_BALBcJ_P0082139 Zfp112 protein_coding unknown_likely_coding MGP_BALBcJ_T0082174.1 MGP_BALBcJ_G0031809.1 mouse_genomes_project 7 22339529 22340384 - MGP_BALBcJ_P0082174 Tescl protein_coding protein_coding MGP_BALBcJ_T0084031.1 MGP_BALBcJ_G0032259.1 mouse_genomes_project 7 46132751 46136426 - MGP_BALBcJ_P0084031 Saa3 protein_coding protein_coding MGP_BALBcJ_T0082363.1 MGP_BALBcJ_G0031853.1 mouse_genomes_project 7 23727012 23728285 - MGP_BALBcJ_P0082363 Erich4 protein_coding protein_coding MGP_BALBcJ_T0082962.1 MGP_BALBcJ_G0032006.1 mouse_genomes_project 7 28840550 28843284 + MGP_BALBcJ_P0082962 Nphs1 protein_coding protein_coding MGP_BALBcJ_T0082963.1 MGP_BALBcJ_G0032006.1 mouse_genomes_project 7 28841990 28868609 + MGP_BALBcJ_P0082963 Nphs1 protein_coding protein_coding MGP_BALBcJ_T0082964.1 MGP_BALBcJ_G0032006.1 mouse_genomes_project 7 28856972 28864449 + Nphs1 protein_coding retained_intron MGP_BALBcJ_T0082965.1 MGP_BALBcJ_G0032006.1 mouse_genomes_project 7 28859761 28868271 + MGP_BALBcJ_P0082965 Nphs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082966.1 MGP_BALBcJ_G0032006.1 mouse_genomes_project 7 28867644 28868378 + Nphs1 protein_coding retained_intron MGP_BALBcJ_T0085608.1 MGP_BALBcJ_G0032701.1 mouse_genomes_project 7 104478523 104522323 - MGP_BALBcJ_P0085608 Trim30a protein_coding protein_coding MGP_BALBcJ_T0085609.1 MGP_BALBcJ_G0032701.1 mouse_genomes_project 7 104480832 104482109 - Trim30a protein_coding retained_intron MGP_BALBcJ_T0085610.1 MGP_BALBcJ_G0032701.1 mouse_genomes_project 7 104480857 104481803 - Trim30a protein_coding processed_transcript MGP_BALBcJ_T0085611.1 MGP_BALBcJ_G0032701.1 mouse_genomes_project 7 104481172 104481755 - Trim30a protein_coding retained_intron MGP_BALBcJ_T0015753.1 MGP_BALBcJ_G0013850.1 mouse_genomes_project 7 33115701 33116117 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083471.1 MGP_BALBcJ_G0032110.1 mouse_genomes_project 7 42669322 42670574 + MGP_BALBcJ_P0083471 Gm42419 protein_coding protein_coding MGP_BALBcJ_T0015810.1 MGP_BALBcJ_G0013907.1 mouse_genomes_project 7 73333172 73333538 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083214.1 MGP_BALBcJ_G0032053.1 mouse_genomes_project 7 32342133 32343317 + MGP_BALBcJ_P0083214 Scgb1b24 protein_coding protein_coding MGP_BALBcJ_T0011667.1 MGP_BALBcJ_G0009792.1 mouse_genomes_project 7 74619042 74619393 - Gm22326 misc_RNA misc_RNA MGP_BALBcJ_T0083395.1 MGP_BALBcJ_G0032087.1 mouse_genomes_project 7 36905571 36915299 - MGP_BALBcJ_P0083395 Ccne1 protein_coding protein_coding MGP_BALBcJ_T0083396.1 MGP_BALBcJ_G0032087.1 mouse_genomes_project 7 36906255 36907091 - Ccne1 protein_coding retained_intron MGP_BALBcJ_T0083397.1 MGP_BALBcJ_G0032087.1 mouse_genomes_project 7 36906401 36906959 - Ccne1 protein_coding processed_transcript MGP_BALBcJ_T0083398.1 MGP_BALBcJ_G0032087.1 mouse_genomes_project 7 36908240 36914664 - MGP_BALBcJ_P0083398 Ccne1 protein_coding protein_coding MGP_BALBcJ_T0083399.1 MGP_BALBcJ_G0032087.1 mouse_genomes_project 7 36910753 36915267 - MGP_BALBcJ_P0083399 Ccne1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082675.1 MGP_BALBcJ_G0031938.1 mouse_genomes_project 7 26898736 26926193 - MGP_BALBcJ_P0082675 Acp7 protein_coding protein_coding MGP_BALBcJ_T0082676.1 MGP_BALBcJ_G0031938.1 mouse_genomes_project 7 26908958 26925633 - Acp7 protein_coding processed_transcript MGP_BALBcJ_T0082677.1 MGP_BALBcJ_G0031938.1 mouse_genomes_project 7 26909447 26925633 - Acp7 protein_coding processed_transcript MGP_BALBcJ_T0082678.1 MGP_BALBcJ_G0031938.1 mouse_genomes_project 7 26924616 26925626 - Acp7 protein_coding processed_transcript MGP_BALBcJ_T0082679.1 MGP_BALBcJ_G0031938.1 mouse_genomes_project 7 26924649 26926456 - Acp7 protein_coding processed_transcript MGP_BALBcJ_T0002264.1 MGP_BALBcJ_G0002175.1 mouse_genomes_project 7 77899275 77900365 - TEC TEC MGP_BALBcJ_T0084920.1 MGP_BALBcJ_G0032470.1 mouse_genomes_project 7 86553311 86560239 + MGP_BALBcJ_P0084920 protein_coding protein_coding MGP_BALBcJ_T0082952.1 MGP_BALBcJ_G0032003.1 mouse_genomes_project 7 28804090 28811088 + MGP_BALBcJ_P0082952 Nfkbid protein_coding protein_coding MGP_BALBcJ_T0082953.1 MGP_BALBcJ_G0032003.1 mouse_genomes_project 7 28804764 28811087 + MGP_BALBcJ_P0082953 Nfkbid protein_coding protein_coding MGP_BALBcJ_T0082954.1 MGP_BALBcJ_G0032003.1 mouse_genomes_project 7 28805619 28811088 + MGP_BALBcJ_P0082954 Nfkbid protein_coding protein_coding MGP_BALBcJ_T0082955.1 MGP_BALBcJ_G0032003.1 mouse_genomes_project 7 28807901 28808605 + Nfkbid protein_coding retained_intron MGP_BALBcJ_T0083338.1 MGP_BALBcJ_G0032078.1 mouse_genomes_project 7 34301492 34310507 - MGP_BALBcJ_P0083338 Nudt19 protein_coding protein_coding MGP_BALBcJ_T0083339.1 MGP_BALBcJ_G0032078.1 mouse_genomes_project 7 34301828 34309397 - Nudt19 protein_coding processed_transcript MGP_BALBcJ_T0083340.1 MGP_BALBcJ_G0032078.1 mouse_genomes_project 7 34302283 34306260 - Nudt19 protein_coding retained_intron MGP_BALBcJ_T0083774.1 MGP_BALBcJ_G0032195.1 mouse_genomes_project 7 44526738 44532398 + MGP_BALBcJ_P0083774 Pih1d1 protein_coding protein_coding MGP_BALBcJ_T0083775.1 MGP_BALBcJ_G0032195.1 mouse_genomes_project 7 44528274 44532398 + MGP_BALBcJ_P0083775 Pih1d1 protein_coding protein_coding MGP_BALBcJ_T0005165.1 MGP_BALBcJ_G0004400.1 mouse_genomes_project 7 29370936 29372763 + Gm17077 antisense antisense MGP_BALBcJ_T0086343.1 MGP_BALBcJ_G0032941.1 mouse_genomes_project 7 122653121 122663512 + MGP_BALBcJ_P0086343 Plk1 protein_coding protein_coding MGP_BALBcJ_T0086344.1 MGP_BALBcJ_G0032941.1 mouse_genomes_project 7 122653189 122657677 + MGP_BALBcJ_P0086344 Plk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086345.1 MGP_BALBcJ_G0032941.1 mouse_genomes_project 7 122653263 122655328 + MGP_BALBcJ_P0086345 Plk1 protein_coding protein_coding MGP_BALBcJ_T0085579.1 MGP_BALBcJ_G0032693.1 mouse_genomes_project 7 104369346 104378095 + Trim6 protein_coding retained_intron MGP_BALBcJ_T0085580.1 MGP_BALBcJ_G0032693.1 mouse_genomes_project 7 104369348 104384367 + MGP_BALBcJ_P0085580 Trim6 protein_coding protein_coding MGP_BALBcJ_T0085581.1 MGP_BALBcJ_G0032693.1 mouse_genomes_project 7 104369390 104376458 + MGP_BALBcJ_P0085581 Trim6 protein_coding protein_coding MGP_BALBcJ_T0085582.1 MGP_BALBcJ_G0032693.1 mouse_genomes_project 7 104369982 104376495 + MGP_BALBcJ_P0085582 Trim6 protein_coding protein_coding MGP_BALBcJ_T0085583.1 MGP_BALBcJ_G0032693.1 mouse_genomes_project 7 104371715 104377392 + MGP_BALBcJ_P0085583 Trim6 protein_coding protein_coding MGP_BALBcJ_T0085584.1 MGP_BALBcJ_G0032693.1 mouse_genomes_project 7 104376068 104382252 + MGP_BALBcJ_P0085584 Trim6 protein_coding protein_coding MGP_BALBcJ_T0084310.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 64861936 64940678 - MGP_BALBcJ_P0084310 Tjp1 protein_coding protein_coding MGP_BALBcJ_T0084311.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 64862479 64940454 - MGP_BALBcJ_P0084311 Tjp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084312.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 64862479 64940454 - MGP_BALBcJ_P0084312 Tjp1 protein_coding protein_coding MGP_BALBcJ_T0084313.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 64863275 64868077 - Tjp1 protein_coding processed_transcript MGP_BALBcJ_T0084314.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 64906141 64908716 - Tjp1 protein_coding retained_intron MGP_BALBcJ_T0084315.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 64908535 65099563 - MGP_BALBcJ_P0084315 Tjp1 protein_coding protein_coding MGP_BALBcJ_T0084316.1 MGP_BALBcJ_G0032333.1 mouse_genomes_project 7 65084965 65099648 - Tjp1 protein_coding retained_intron MGP_BALBcJ_T0018312.1 MGP_BALBcJ_G0015605.1 mouse_genomes_project 7 44352967 44357840 + Gm15545 processed_transcript processed_transcript MGP_BALBcJ_T0018313.1 MGP_BALBcJ_G0015605.1 mouse_genomes_project 7 44352994 44360533 + Gm15545 processed_transcript processed_transcript MGP_BALBcJ_T0018314.1 MGP_BALBcJ_G0015605.1 mouse_genomes_project 7 44353001 44357029 + Gm15545 processed_transcript processed_transcript MGP_BALBcJ_T0018315.1 MGP_BALBcJ_G0015605.1 mouse_genomes_project 7 44353040 44358262 + Gm15545 processed_transcript processed_transcript MGP_BALBcJ_T0087643.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177208 142183071 - Pidd1 protein_coding retained_intron MGP_BALBcJ_T0087644.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177208 142182435 - MGP_BALBcJ_P0087644 Pidd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087645.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177208 142182432 - MGP_BALBcJ_P0087645 Pidd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087646.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177208 142183104 - MGP_BALBcJ_P0087646 Pidd1 protein_coding protein_coding MGP_BALBcJ_T0087647.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177212 142183087 - Pidd1 protein_coding retained_intron MGP_BALBcJ_T0087648.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177220 142182435 - Pidd1 protein_coding retained_intron MGP_BALBcJ_T0087649.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177610 142182434 - MGP_BALBcJ_P0087649 Pidd1 protein_coding protein_coding MGP_BALBcJ_T0087650.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177620 142182399 - MGP_BALBcJ_P0087650 Pidd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087651.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142177625 142182399 - Pidd1 protein_coding retained_intron MGP_BALBcJ_T0087652.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142178594 142179203 - Pidd1 protein_coding retained_intron MGP_BALBcJ_T0087653.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142180128 142181368 - Pidd1 protein_coding retained_intron MGP_BALBcJ_T0087654.1 MGP_BALBcJ_G0033213.1 mouse_genomes_project 7 142181244 142183073 - Pidd1 protein_coding processed_transcript MGP_BALBcJ_T0085590.1 MGP_BALBcJ_G0032696.1 mouse_genomes_project 7 104393361 104404090 + MGP_BALBcJ_P0085590 protein_coding protein_coding MGP_BALBcJ_T0085593.1 MGP_BALBcJ_G0032696.1 mouse_genomes_project 7 104396537 104403798 + MGP_BALBcJ_P0085593 protein_coding protein_coding MGP_BALBcJ_T0085594.1 MGP_BALBcJ_G0032696.1 mouse_genomes_project 7 104396537 104403798 + MGP_BALBcJ_P0085594 protein_coding protein_coding MGP_BALBcJ_T0082474.1 MGP_BALBcJ_G0031884.1 mouse_genomes_project 7 25416827 25418233 - MGP_BALBcJ_P0082474 Mia protein_coding protein_coding MGP_BALBcJ_T0082475.1 MGP_BALBcJ_G0031884.1 mouse_genomes_project 7 25416829 25418211 - Mia protein_coding retained_intron MGP_BALBcJ_T0082476.1 MGP_BALBcJ_G0031884.1 mouse_genomes_project 7 25416829 25418241 - MGP_BALBcJ_P0082476 Mia protein_coding protein_coding MGP_BALBcJ_T0082477.1 MGP_BALBcJ_G0031884.1 mouse_genomes_project 7 25417574 25418080 - Mia protein_coding processed_transcript MGP_BALBcJ_T0005297.1 MGP_BALBcJ_G0004493.1 mouse_genomes_project 7 145157076 145195526 - Gm14372 antisense antisense MGP_BALBcJ_T0084995.1 MGP_BALBcJ_G0032494.1 mouse_genomes_project 7 90301392 90309185 - MGP_BALBcJ_P0084995 Tmem126b protein_coding protein_coding MGP_BALBcJ_T0084996.1 MGP_BALBcJ_G0032494.1 mouse_genomes_project 7 90303123 90309179 - Tmem126b protein_coding retained_intron MGP_BALBcJ_T0083743.1 MGP_BALBcJ_G0032181.1 mouse_genomes_project 7 44343157 44352385 - MGP_BALBcJ_P0083743 protein_coding protein_coding MGP_BALBcJ_T0084690.1 MGP_BALBcJ_G0032403.1 mouse_genomes_project 7 80062622 80064849 + MGP_BALBcJ_P0084690 Hddc3 protein_coding protein_coding MGP_BALBcJ_T0084691.1 MGP_BALBcJ_G0032403.1 mouse_genomes_project 7 80062634 80063498 + MGP_BALBcJ_P0084691 Hddc3 protein_coding protein_coding MGP_BALBcJ_T0084692.1 MGP_BALBcJ_G0032403.1 mouse_genomes_project 7 80063084 80063900 + MGP_BALBcJ_P0084692 Hddc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084693.1 MGP_BALBcJ_G0032403.1 mouse_genomes_project 7 80063297 80068680 + MGP_BALBcJ_P0084693 Hddc3 protein_coding protein_coding MGP_BALBcJ_T0008986.1 MGP_BALBcJ_G0007236.1 mouse_genomes_project 7 122069746 122071435 + 1700025J12Rik lincRNA lincRNA MGP_BALBcJ_T0098392.1 MGP_BALBcJ_G0036446.1 mouse_genomes_project 7 108520428 108521530 + pseudogene pseudogene MGP_BALBcJ_T0082128.1 MGP_BALBcJ_G0031796.1 mouse_genomes_project 7 21932120 21933093 + MGP_BALBcJ_P0082128 Vmn1r180 protein_coding protein_coding MGP_BALBcJ_T0081511.1 MGP_BALBcJ_G0031575.1 mouse_genomes_project 7 3113440 3176550 + MGP_BALBcJ_P0081511 Nlrp4c protein_coding protein_coding MGP_BALBcJ_T0085563.1 MGP_BALBcJ_G0032679.1 mouse_genomes_project 7 104167753 104170962 - MGP_BALBcJ_P0085563 Olfr639 protein_coding protein_coding MGP_BALBcJ_T0084519.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78598312 78610835 + Aen protein_coding processed_transcript MGP_BALBcJ_T0084520.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78598385 78610835 + MGP_BALBcJ_P0084520 Aen protein_coding protein_coding MGP_BALBcJ_T0084521.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78598392 78608007 + MGP_BALBcJ_P0084521 Aen protein_coding protein_coding MGP_BALBcJ_T0084522.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78598467 78608004 + MGP_BALBcJ_P0084522 Aen protein_coding protein_coding MGP_BALBcJ_T0084523.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78600489 78602405 + MGP_BALBcJ_P0084523 Aen protein_coding protein_coding MGP_BALBcJ_T0084524.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78601943 78605585 + Aen protein_coding processed_transcript MGP_BALBcJ_T0084525.1 MGP_BALBcJ_G0032372.1 mouse_genomes_project 7 78602161 78606948 + MGP_BALBcJ_P0084525 Aen protein_coding protein_coding MGP_BALBcJ_T0015897.1 MGP_BALBcJ_G0013994.1 mouse_genomes_project 7 128659342 128660242 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085528.1 MGP_BALBcJ_G0032647.1 mouse_genomes_project 7 103602487 103603402 - MGP_BALBcJ_P0085528 protein_coding protein_coding MGP_BALBcJ_T0087526.1 MGP_BALBcJ_G0033194.1 mouse_genomes_project 7 141831021 141848179 - MGP_BALBcJ_P0087526 Ano9 protein_coding protein_coding MGP_BALBcJ_T0010897.1 MGP_BALBcJ_G0009022.1 mouse_genomes_project 7 115585451 115585531 + Gm27684 miRNA miRNA MGP_BALBcJ_T0086175.1 MGP_BALBcJ_G0032894.1 mouse_genomes_project 7 119316290 119366846 + Iqck protein_coding retained_intron MGP_BALBcJ_T0086176.1 MGP_BALBcJ_G0032894.1 mouse_genomes_project 7 119316305 119445382 + MGP_BALBcJ_P0086176 Iqck protein_coding protein_coding MGP_BALBcJ_T0086177.1 MGP_BALBcJ_G0032894.1 mouse_genomes_project 7 119316305 119445914 + MGP_BALBcJ_P0086177 Iqck protein_coding protein_coding MGP_BALBcJ_T0086178.1 MGP_BALBcJ_G0032894.1 mouse_genomes_project 7 119316305 119445550 + MGP_BALBcJ_P0086178 Iqck protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086179.1 MGP_BALBcJ_G0032894.1 mouse_genomes_project 7 119407715 119445028 + Iqck protein_coding processed_transcript MGP_BALBcJ_T0087738.1 MGP_BALBcJ_G0033235.1 mouse_genomes_project 7 142999091 143000028 - MGP_BALBcJ_P0087738 protein_coding protein_coding MGP_BALBcJ_T0085498.1 MGP_BALBcJ_G0032619.1 mouse_genomes_project 7 102973841 102974886 + MGP_BALBcJ_P0085498 Olfr570 protein_coding protein_coding MGP_BALBcJ_T0102683.1 MGP_BALBcJ_G0040498.1 mouse_genomes_project 7 9234852 9235817 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083059.1 MGP_BALBcJ_G0032025.1 mouse_genomes_project 7 29113862 29115696 - MGP_BALBcJ_P0083059 Tmem147 protein_coding protein_coding MGP_BALBcJ_T0085519.1 MGP_BALBcJ_G0032638.1 mouse_genomes_project 7 103442348 103452596 + MGP_BALBcJ_P0085519 Olfr597 protein_coding protein_coding MGP_BALBcJ_T0002285.1 MGP_BALBcJ_G0002196.1 mouse_genomes_project 7 117830097 117831998 + TEC TEC MGP_BALBcJ_T0084140.1 MGP_BALBcJ_G0032296.1 mouse_genomes_project 7 51202752 51251909 + MGP_BALBcJ_P0084140 Slc17a6 protein_coding protein_coding MGP_BALBcJ_T0083986.1 MGP_BALBcJ_G0032248.1 mouse_genomes_project 7 45377940 45433652 - MGP_BALBcJ_P0083986 Abcc6 protein_coding protein_coding MGP_BALBcJ_T0083987.1 MGP_BALBcJ_G0032248.1 mouse_genomes_project 7 45378456 45379247 - Abcc6 protein_coding retained_intron MGP_BALBcJ_T0083988.1 MGP_BALBcJ_G0032248.1 mouse_genomes_project 7 45399543 45404469 - Abcc6 protein_coding retained_intron MGP_BALBcJ_T0087852.1 MGP_BALBcJ_G0033253.1 mouse_genomes_project 7 143827575 143829420 + MGP_BALBcJ_P0087852 Tssc4 protein_coding protein_coding MGP_BALBcJ_T0087853.1 MGP_BALBcJ_G0033253.1 mouse_genomes_project 7 143827667 143828873 + MGP_BALBcJ_P0087853 Tssc4 protein_coding protein_coding MGP_BALBcJ_T0087854.1 MGP_BALBcJ_G0033253.1 mouse_genomes_project 7 143827694 143829414 + MGP_BALBcJ_P0087854 Tssc4 protein_coding protein_coding MGP_BALBcJ_T0087855.1 MGP_BALBcJ_G0033253.1 mouse_genomes_project 7 143827694 143829414 + MGP_BALBcJ_P0087855 Tssc4 protein_coding protein_coding MGP_BALBcJ_T0087856.1 MGP_BALBcJ_G0033253.1 mouse_genomes_project 7 143827750 143828872 + MGP_BALBcJ_P0087856 Tssc4 protein_coding protein_coding MGP_BALBcJ_T0087857.1 MGP_BALBcJ_G0033253.1 mouse_genomes_project 7 143827870 143828936 + MGP_BALBcJ_P0087857 Tssc4 protein_coding protein_coding MGP_BALBcJ_T0002231.1 MGP_BALBcJ_G0002143.1 mouse_genomes_project 7 55538295 55539619 - TEC TEC MGP_BALBcJ_T0082343.1 MGP_BALBcJ_G0031850.1 mouse_genomes_project 7 23428464 23430548 - MGP_BALBcJ_P0082343 Cnfn protein_coding protein_coding MGP_BALBcJ_T0082344.1 MGP_BALBcJ_G0031850.1 mouse_genomes_project 7 23428466 23430569 - MGP_BALBcJ_P0082344 Cnfn protein_coding protein_coding MGP_BALBcJ_T0015787.1 MGP_BALBcJ_G0013884.1 mouse_genomes_project 7 55202934 55203292 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015713.1 MGP_BALBcJ_G0013810.1 mouse_genomes_project 7 15526015 15526507 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084290.1 MGP_BALBcJ_G0032328.1 mouse_genomes_project 7 63986905 64002622 - MGP_BALBcJ_P0084290 Mphosph10 protein_coding protein_coding MGP_BALBcJ_T0084291.1 MGP_BALBcJ_G0032328.1 mouse_genomes_project 7 63987654 63994876 - Mphosph10 protein_coding retained_intron MGP_BALBcJ_T0084292.1 MGP_BALBcJ_G0032328.1 mouse_genomes_project 7 63998341 64002590 - Mphosph10 protein_coding retained_intron MGP_BALBcJ_T0081331.1 MGP_BALBcJ_G0031521.1 mouse_genomes_project 7 1123772 1126232 - MGP_BALBcJ_P0081331 Leng9 protein_coding protein_coding MGP_BALBcJ_T0010815.1 MGP_BALBcJ_G0008940.1 mouse_genomes_project 7 1432800 1432896 - Gm24605 miRNA miRNA MGP_BALBcJ_T0084881.1 MGP_BALBcJ_G0032444.1 mouse_genomes_project 7 83641145 83645645 - MGP_BALBcJ_P0084881 Mesdc1 protein_coding protein_coding MGP_BALBcJ_T0102687.1 MGP_BALBcJ_G0040502.1 mouse_genomes_project 7 9336874 9338119 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083779.1 MGP_BALBcJ_G0032199.1 mouse_genomes_project 7 44557841 44579410 - MGP_BALBcJ_P0083779 Ccdc155 protein_coding protein_coding MGP_BALBcJ_T0083780.1 MGP_BALBcJ_G0032199.1 mouse_genomes_project 7 44558145 44564256 - Ccdc155 protein_coding retained_intron MGP_BALBcJ_T0086253.1 MGP_BALBcJ_G0032918.1 mouse_genomes_project 7 121095532 121119840 + MGP_BALBcJ_P0086253 Uqcrc2 protein_coding protein_coding MGP_BALBcJ_T0086254.1 MGP_BALBcJ_G0032918.1 mouse_genomes_project 7 121095596 121103574 + Uqcrc2 protein_coding processed_transcript MGP_BALBcJ_T0086255.1 MGP_BALBcJ_G0032918.1 mouse_genomes_project 7 121095871 121105599 + Uqcrc2 protein_coding processed_transcript MGP_BALBcJ_T0086256.1 MGP_BALBcJ_G0032918.1 mouse_genomes_project 7 121098018 121119523 + Uqcrc2 protein_coding processed_transcript MGP_BALBcJ_T0086257.1 MGP_BALBcJ_G0032918.1 mouse_genomes_project 7 121105274 121111287 + Uqcrc2 protein_coding retained_intron MGP_BALBcJ_T0086258.1 MGP_BALBcJ_G0032918.1 mouse_genomes_project 7 121111636 121118216 + Uqcrc2 protein_coding retained_intron MGP_BALBcJ_T0081303.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092728 1098913 + Ttyh1 protein_coding processed_transcript MGP_BALBcJ_T0081304.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092850 1108253 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0081305.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092850 1108651 + MGP_BALBcJ_P0081305 Ttyh1 protein_coding protein_coding MGP_BALBcJ_T0081306.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092853 1112561 + MGP_BALBcJ_P0081306 Ttyh1 protein_coding protein_coding MGP_BALBcJ_T0081307.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092876 1098944 + Ttyh1 protein_coding processed_transcript MGP_BALBcJ_T0081308.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092905 1108637 + MGP_BALBcJ_P0081308 Ttyh1 protein_coding protein_coding MGP_BALBcJ_T0081309.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092908 1098953 + MGP_BALBcJ_P0081309 Ttyh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081310.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1092942 1101590 + MGP_BALBcJ_P0081310 Ttyh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081311.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1093074 1108634 + MGP_BALBcJ_P0081311 Ttyh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081312.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1093540 1098885 + Ttyh1 protein_coding processed_transcript MGP_BALBcJ_T0081313.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1095473 1108711 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0081314.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1097813 1107543 + MGP_BALBcJ_P0081314 Ttyh1 protein_coding protein_coding MGP_BALBcJ_T0081315.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1098991 1106723 + Ttyh1 protein_coding processed_transcript MGP_BALBcJ_T0081316.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1101550 1103444 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0081317.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1102570 1106501 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0081318.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1103943 1105194 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0081319.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1104461 1105338 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0081320.1 MGP_BALBcJ_G0031519.1 mouse_genomes_project 7 1106333 1107276 + Ttyh1 protein_coding retained_intron MGP_BALBcJ_T0082852.1 MGP_BALBcJ_G0031976.1 mouse_genomes_project 7 28284195 28294393 + MGP_BALBcJ_P0082852 Zfp383 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082853.1 MGP_BALBcJ_G0031976.1 mouse_genomes_project 7 28284476 28294387 + MGP_BALBcJ_P0082853 Zfp383 protein_coding protein_coding MGP_BALBcJ_T0082693.1 MGP_BALBcJ_G0031942.1 mouse_genomes_project 7 27047939 27060602 + MGP_BALBcJ_P0082693 Sars2 protein_coding protein_coding MGP_BALBcJ_T0002223.1 MGP_BALBcJ_G0002135.1 mouse_genomes_project 7 49035125 49037524 + TEC TEC MGP_BALBcJ_T0010873.1 MGP_BALBcJ_G0008998.1 mouse_genomes_project 7 61571806 61571874 - Mir344f miRNA miRNA MGP_BALBcJ_T0085529.1 MGP_BALBcJ_G0032648.1 mouse_genomes_project 7 103612017 103612968 + MGP_BALBcJ_P0085529 Olfr608 protein_coding protein_coding MGP_BALBcJ_T0102692.1 MGP_BALBcJ_G0040507.1 mouse_genomes_project 7 9734596 9735287 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005159.1 MGP_BALBcJ_G0004395.1 mouse_genomes_project 7 28898225 28905205 + Arhgap33os antisense antisense MGP_BALBcJ_T0005157.1 MGP_BALBcJ_G0004393.1 mouse_genomes_project 7 27933946 27936397 - Gm29326 antisense antisense MGP_BALBcJ_T0081584.1 MGP_BALBcJ_G0031611.1 mouse_genomes_project 7 8007180 8009220 - MGP_BALBcJ_P0081584 Vmn1r71 protein_coding protein_coding MGP_BALBcJ_T0082537.1 MGP_BALBcJ_G0031897.1 mouse_genomes_project 7 25728124 25731533 + MGP_BALBcJ_P0082537 Sertad1 protein_coding protein_coding MGP_BALBcJ_T0082538.1 MGP_BALBcJ_G0031897.1 mouse_genomes_project 7 25728589 25730724 + MGP_BALBcJ_P0082538 Sertad1 protein_coding protein_coding MGP_BALBcJ_T0082008.1 MGP_BALBcJ_G0031754.1 mouse_genomes_project 7 17206707 17208275 + Ppp1r13l protein_coding processed_transcript MGP_BALBcJ_T0082009.1 MGP_BALBcJ_G0031754.1 mouse_genomes_project 7 17206728 17216963 + MGP_BALBcJ_P0082009 Ppp1r13l protein_coding protein_coding MGP_BALBcJ_T0082010.1 MGP_BALBcJ_G0031754.1 mouse_genomes_project 7 17207604 17216959 + MGP_BALBcJ_P0082010 Ppp1r13l protein_coding protein_coding MGP_BALBcJ_T0082011.1 MGP_BALBcJ_G0031754.1 mouse_genomes_project 7 17208174 17225572 + MGP_BALBcJ_P0082011 Ppp1r13l protein_coding protein_coding MGP_BALBcJ_T0082012.1 MGP_BALBcJ_G0031754.1 mouse_genomes_project 7 17215523 17216937 + MGP_BALBcJ_P0082012 Ppp1r13l protein_coding protein_coding MGP_BALBcJ_T0083042.1 MGP_BALBcJ_G0032020.1 mouse_genomes_project 7 29036159 29046484 - MGP_BALBcJ_P0083042 Rbm42 protein_coding protein_coding MGP_BALBcJ_T0083043.1 MGP_BALBcJ_G0032020.1 mouse_genomes_project 7 29036164 29046311 - MGP_BALBcJ_P0083043 Rbm42 protein_coding protein_coding MGP_BALBcJ_T0083044.1 MGP_BALBcJ_G0032020.1 mouse_genomes_project 7 29040268 29042155 - Rbm42 protein_coding retained_intron MGP_BALBcJ_T0082778.1 MGP_BALBcJ_G0031958.1 mouse_genomes_project 7 27489751 27501859 - MGP_BALBcJ_P0082778 Spred3 protein_coding unknown_likely_coding MGP_BALBcJ_T0082779.1 MGP_BALBcJ_G0031958.1 mouse_genomes_project 7 27498411 27502177 - Spred3 protein_coding retained_intron MGP_BALBcJ_T0008888.1 MGP_BALBcJ_G0007175.1 mouse_genomes_project 7 72286239 72286544 - Gm28745 lincRNA lincRNA MGP_BALBcJ_T0008970.1 MGP_BALBcJ_G0007227.1 mouse_genomes_project 7 115265764 115268992 - Gm45017 lincRNA lincRNA MGP_BALBcJ_T0082987.1 MGP_BALBcJ_G0032012.1 mouse_genomes_project 7 28954440 28956142 - MGP_BALBcJ_P0082987 Psenen protein_coding protein_coding MGP_BALBcJ_T0015673.1 MGP_BALBcJ_G0013770.1 mouse_genomes_project 7 1401903 1402366 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084224.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58765738 58783721 + MGP_BALBcJ_P0084224 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084225.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58765738 58812224 + MGP_BALBcJ_P0084225 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084226.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58765758 58828116 + Ube3a protein_coding retained_intron MGP_BALBcJ_T0084227.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58766113 58816221 + Ube3a protein_coding processed_transcript MGP_BALBcJ_T0084228.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58766161 58784064 + Ube3a protein_coding processed_transcript MGP_BALBcJ_T0084229.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58766219 58816484 + MGP_BALBcJ_P0084229 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084230.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58779428 58812134 + MGP_BALBcJ_P0084230 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084231.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58779970 58845402 + MGP_BALBcJ_P0084231 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084232.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58817067 58821488 + Ube3a protein_coding retained_intron MGP_BALBcJ_T0084233.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58823070 58826416 + Ube3a protein_coding retained_intron MGP_BALBcJ_T0084234.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58826831 58841027 + MGP_BALBcJ_P0084234 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084235.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58827595 58841049 + MGP_BALBcJ_P0084235 Ube3a protein_coding protein_coding MGP_BALBcJ_T0084236.1 MGP_BALBcJ_G0032313.1 mouse_genomes_project 7 58839605 58841051 + Ube3a protein_coding retained_intron MGP_BALBcJ_T0085143.1 MGP_BALBcJ_G0032525.1 mouse_genomes_project 7 98411058 98420495 + MGP_BALBcJ_P0085143 Lrrc32 protein_coding protein_coding MGP_BALBcJ_T0085144.1 MGP_BALBcJ_G0032525.1 mouse_genomes_project 7 98411934 98424427 + MGP_BALBcJ_P0085144 Lrrc32 protein_coding protein_coding MGP_BALBcJ_T0085145.1 MGP_BALBcJ_G0032525.1 mouse_genomes_project 7 98416462 98424081 + MGP_BALBcJ_P0085145 Lrrc32 protein_coding protein_coding MGP_BALBcJ_T0086465.1 MGP_BALBcJ_G0032962.1 mouse_genomes_project 7 126744277 126767376 + MGP_BALBcJ_P0086465 Sbk1 protein_coding protein_coding MGP_BALBcJ_T0086466.1 MGP_BALBcJ_G0032962.1 mouse_genomes_project 7 126745058 126762291 + MGP_BALBcJ_P0086466 Sbk1 protein_coding protein_coding MGP_BALBcJ_T0086467.1 MGP_BALBcJ_G0032962.1 mouse_genomes_project 7 126763439 126765180 + MGP_BALBcJ_P0086467 Sbk1 protein_coding protein_coding MGP_BALBcJ_T0086951.1 MGP_BALBcJ_G0033045.1 mouse_genomes_project 7 128383370 128392598 - MGP_BALBcJ_P0086951 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084762.1 MGP_BALBcJ_G0032412.1 mouse_genomes_project 7 80634190 80636335 - Nmb protein_coding retained_intron MGP_BALBcJ_T0084763.1 MGP_BALBcJ_G0032412.1 mouse_genomes_project 7 80634191 80637018 - MGP_BALBcJ_P0084763 Nmb protein_coding protein_coding MGP_BALBcJ_T0084764.1 MGP_BALBcJ_G0032412.1 mouse_genomes_project 7 80634197 80636316 - Nmb protein_coding retained_intron MGP_BALBcJ_T0084765.1 MGP_BALBcJ_G0032412.1 mouse_genomes_project 7 80634197 80637002 - MGP_BALBcJ_P0084765 Nmb protein_coding protein_coding MGP_BALBcJ_T0085635.1 MGP_BALBcJ_G0032721.1 mouse_genomes_project 7 105097328 105098267 - MGP_BALBcJ_P0085635 Olfr672 protein_coding protein_coding MGP_BALBcJ_T0087163.1 MGP_BALBcJ_G0033081.1 mouse_genomes_project 7 131772924 131850445 + MGP_BALBcJ_P0087163 5430419D17Rik protein_coding protein_coding MGP_BALBcJ_T0087164.1 MGP_BALBcJ_G0033081.1 mouse_genomes_project 7 131811205 131832906 + 5430419D17Rik protein_coding retained_intron MGP_BALBcJ_T0084680.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80044731 80060524 - MGP_BALBcJ_P0084680 Unc45a protein_coding protein_coding MGP_BALBcJ_T0084681.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80044734 80059738 - MGP_BALBcJ_P0084681 Unc45a protein_coding protein_coding MGP_BALBcJ_T0084682.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80044735 80059690 - MGP_BALBcJ_P0084682 Unc45a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084683.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80044765 80059281 - MGP_BALBcJ_P0084683 Unc45a protein_coding protein_coding MGP_BALBcJ_T0084684.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80053631 80059725 - MGP_BALBcJ_P0084684 Unc45a protein_coding protein_coding MGP_BALBcJ_T0084685.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80057989 80059720 - Unc45a protein_coding retained_intron MGP_BALBcJ_T0084686.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80058539 80059667 - Unc45a protein_coding retained_intron MGP_BALBcJ_T0084687.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80058827 80059736 - MGP_BALBcJ_P0084687 Unc45a protein_coding protein_coding MGP_BALBcJ_T0084688.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80058831 80059738 - Unc45a protein_coding processed_transcript MGP_BALBcJ_T0084689.1 MGP_BALBcJ_G0032402.1 mouse_genomes_project 7 80059222 80059730 - Unc45a protein_coding retained_intron MGP_BALBcJ_T0081508.1 MGP_BALBcJ_G0031572.1 mouse_genomes_project 7 2921753 2923196 - MGP_BALBcJ_P0081508 Vmn1r56 protein_coding protein_coding MGP_BALBcJ_T0086504.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943814 126951950 - MGP_BALBcJ_P0086504 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0086505.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943816 126951963 - MGP_BALBcJ_P0086505 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0086506.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943817 126951990 - MGP_BALBcJ_P0086506 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0086507.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943819 126949913 - MGP_BALBcJ_P0086507 Sh2b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086508.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943819 126951684 - MGP_BALBcJ_P0086508 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0086509.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943819 126951682 - MGP_BALBcJ_P0086509 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0086510.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126943825 126951910 - MGP_BALBcJ_P0086510 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0086511.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126945719 126947015 - Sh2b1 protein_coding processed_transcript MGP_BALBcJ_T0086512.1 MGP_BALBcJ_G0032969.1 mouse_genomes_project 7 126949636 126952284 - MGP_BALBcJ_P0086512 Sh2b1 protein_coding protein_coding MGP_BALBcJ_T0083754.1 MGP_BALBcJ_G0032185.1 mouse_genomes_project 7 44381792 44387181 + MGP_BALBcJ_P0083754 Rras protein_coding unknown_likely_coding MGP_BALBcJ_T0015733.1 MGP_BALBcJ_G0013830.1 mouse_genomes_project 7 24371434 24373249 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085588.1 MGP_BALBcJ_G0032695.1 mouse_genomes_project 7 104393325 104404778 + MGP_BALBcJ_P0085588 protein_coding protein_coding MGP_BALBcJ_T0085589.1 MGP_BALBcJ_G0032695.1 mouse_genomes_project 7 104393327 104404778 + MGP_BALBcJ_P0085589 protein_coding protein_coding MGP_BALBcJ_T0085591.1 MGP_BALBcJ_G0032695.1 mouse_genomes_project 7 104393423 104407770 + MGP_BALBcJ_P0085591 protein_coding protein_coding MGP_BALBcJ_T0085592.1 MGP_BALBcJ_G0032695.1 mouse_genomes_project 7 104393432 104403962 + MGP_BALBcJ_P0085592 protein_coding protein_coding MGP_BALBcJ_T0081418.1 MGP_BALBcJ_G0031538.1 mouse_genomes_project 7 1682525 1701114 - MGP_BALBcJ_P0081418 Tmem150b protein_coding protein_coding MGP_BALBcJ_T0081420.1 MGP_BALBcJ_G0031538.1 mouse_genomes_project 7 1691301 1700947 - MGP_BALBcJ_P0081420 Tmem150b protein_coding protein_coding MGP_BALBcJ_T0085413.1 MGP_BALBcJ_G0032583.1 mouse_genomes_project 7 102057592 102060669 - MGP_BALBcJ_P0085413 Il18bp protein_coding protein_coding MGP_BALBcJ_T0102704.1 MGP_BALBcJ_G0040519.1 mouse_genomes_project 7 12010967 12011824 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0086135.1 MGP_BALBcJ_G0032886.1 mouse_genomes_project 7 118943327 118950211 - MGP_BALBcJ_P0086135 Itpripl2 protein_coding protein_coding MGP_BALBcJ_T0082031.1 MGP_BALBcJ_G0031759.1 mouse_genomes_project 7 17272062 17307975 - MGP_BALBcJ_P0082031 Mark4 protein_coding unknown_likely_coding MGP_BALBcJ_T0082032.1 MGP_BALBcJ_G0031759.1 mouse_genomes_project 7 17273008 17307975 - MGP_BALBcJ_P0082032 Mark4 protein_coding protein_coding MGP_BALBcJ_T0087019.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128756018 128765319 + MGP_BALBcJ_P0087019 protein_coding protein_coding MGP_BALBcJ_T0087020.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128756572 128763023 + MGP_BALBcJ_P0087020 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087021.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128756607 128763330 + MGP_BALBcJ_P0087021 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087022.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128756607 128762984 + MGP_BALBcJ_P0087022 protein_coding protein_coding MGP_BALBcJ_T0087023.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128757629 128763330 + protein_coding retained_intron MGP_BALBcJ_T0087024.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128757629 128763330 + protein_coding retained_intron MGP_BALBcJ_T0087025.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128757629 128763330 + protein_coding retained_intron MGP_BALBcJ_T0087026.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128757629 128763330 + protein_coding retained_intron MGP_BALBcJ_T0087027.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128757629 128763330 + protein_coding retained_intron MGP_BALBcJ_T0087028.1 MGP_BALBcJ_G0033061.1 mouse_genomes_project 7 128757787 128762985 + MGP_BALBcJ_P0087028 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084353.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65803460 65846216 - Lrrk1 protein_coding processed_transcript MGP_BALBcJ_T0084354.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65842490 65973471 - MGP_BALBcJ_P0084354 Lrrk1 protein_coding protein_coding MGP_BALBcJ_T0084355.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65842497 65849327 - Lrrk1 protein_coding retained_intron MGP_BALBcJ_T0084356.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65842929 65867274 - MGP_BALBcJ_P0084356 Lrrk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084357.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65849945 65853556 - Lrrk1 protein_coding retained_intron MGP_BALBcJ_T0084358.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65927878 65929678 - Lrrk1 protein_coding processed_transcript MGP_BALBcJ_T0084359.1 MGP_BALBcJ_G0032341.1 mouse_genomes_project 7 65928046 65973428 - Lrrk1 protein_coding retained_intron MGP_BALBcJ_T0082911.1 MGP_BALBcJ_G0031994.1 mouse_genomes_project 7 28665977 28676185 + MGP_BALBcJ_P0082911 protein_coding protein_coding MGP_BALBcJ_T0015820.1 MGP_BALBcJ_G0013917.1 mouse_genomes_project 7 79956529 79958347 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102748.1 MGP_BALBcJ_G0040563.1 mouse_genomes_project 7 43326935 43365308 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005198.1 MGP_BALBcJ_G0004422.1 mouse_genomes_project 7 56908818 56931932 + Gm9962 antisense antisense MGP_BALBcJ_T0084412.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67225054 67251551 + Ttc23 protein_coding retained_intron MGP_BALBcJ_T0084413.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67225054 67307548 + MGP_BALBcJ_P0084413 Ttc23 protein_coding protein_coding MGP_BALBcJ_T0084414.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67225069 67307550 + MGP_BALBcJ_P0084414 Ttc23 protein_coding protein_coding MGP_BALBcJ_T0084415.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67225094 67307550 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084416.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67225098 67226840 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084417.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67225104 67238416 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084418.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67226802 67259244 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084419.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67232849 67259494 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084420.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67233119 67307547 + MGP_BALBcJ_P0084420 Ttc23 protein_coding protein_coding MGP_BALBcJ_T0084421.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67244419 67248957 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084422.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67248975 67279018 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084423.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67259467 67307026 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0084424.1 MGP_BALBcJ_G0032351.1 mouse_genomes_project 7 67306234 67306988 + Ttc23 protein_coding processed_transcript MGP_BALBcJ_T0082155.1 MGP_BALBcJ_G0031805.1 mouse_genomes_project 7 22254385 22264019 + MGP_BALBcJ_P0082155 Zfp108 protein_coding protein_coding MGP_BALBcJ_T0082156.1 MGP_BALBcJ_G0031805.1 mouse_genomes_project 7 22254631 22264089 + MGP_BALBcJ_P0082156 Zfp108 protein_coding protein_coding MGP_BALBcJ_T0082157.1 MGP_BALBcJ_G0031805.1 mouse_genomes_project 7 22257574 22263558 + MGP_BALBcJ_P0082157 Zfp108 protein_coding protein_coding MGP_BALBcJ_T0009023.1 MGP_BALBcJ_G0007260.1 mouse_genomes_project 7 130474974 130491607 + Gm4265 lincRNA lincRNA MGP_BALBcJ_T0015664.1 MGP_BALBcJ_G0013761.1 mouse_genomes_project 7 442724 443025 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005261.1 MGP_BALBcJ_G0004465.1 mouse_genomes_project 7 122190991 122191930 + 1700069B07Rik antisense antisense MGP_BALBcJ_T0005262.1 MGP_BALBcJ_G0004465.1 mouse_genomes_project 7 122191105 122191928 + 1700069B07Rik antisense antisense MGP_BALBcJ_T0082121.1 MGP_BALBcJ_G0031789.1 mouse_genomes_project 7 21509251 21514302 + MGP_BALBcJ_P0082121 protein_coding protein_coding MGP_BALBcJ_T0085506.1 MGP_BALBcJ_G0032626.1 mouse_genomes_project 7 103060049 103060991 - MGP_BALBcJ_P0085506 Olfr578 protein_coding protein_coding MGP_BALBcJ_T0081890.1 MGP_BALBcJ_G0031718.1 mouse_genomes_project 7 16083533 16099768 - MGP_BALBcJ_P0081890 protein_coding protein_coding MGP_BALBcJ_T0005285.1 MGP_BALBcJ_G0004484.1 mouse_genomes_project 7 133583325 133587294 - Gm15718 antisense antisense MGP_BALBcJ_T0082884.1 MGP_BALBcJ_G0031986.1 mouse_genomes_project 7 28543719 28552839 - MGP_BALBcJ_P0082884 Zfp146 protein_coding protein_coding MGP_BALBcJ_T0082885.1 MGP_BALBcJ_G0031986.1 mouse_genomes_project 7 28545170 28545810 - Zfp146 protein_coding processed_transcript MGP_BALBcJ_T0083474.1 MGP_BALBcJ_G0032113.1 mouse_genomes_project 7 42678773 42679950 + MGP_BALBcJ_P0083474 Nkg7 protein_coding protein_coding MGP_BALBcJ_T0083475.1 MGP_BALBcJ_G0032113.1 mouse_genomes_project 7 42678830 42679947 + MGP_BALBcJ_P0083475 Nkg7 protein_coding protein_coding MGP_BALBcJ_T0083476.1 MGP_BALBcJ_G0032113.1 mouse_genomes_project 7 42679204 42679950 + Nkg7 protein_coding retained_intron MGP_BALBcJ_T0085890.1 MGP_BALBcJ_G0032839.1 mouse_genomes_project 7 110318328 110332253 - MGP_BALBcJ_P0085890 protein_coding unknown_likely_coding MGP_BALBcJ_T0085891.1 MGP_BALBcJ_G0032839.1 mouse_genomes_project 7 110320770 110325100 - protein_coding retained_intron MGP_BALBcJ_T0085892.1 MGP_BALBcJ_G0032839.1 mouse_genomes_project 7 110322763 110332333 - MGP_BALBcJ_P0085892 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085893.1 MGP_BALBcJ_G0032839.1 mouse_genomes_project 7 110322763 110332446 - MGP_BALBcJ_P0085893 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085894.1 MGP_BALBcJ_G0032839.1 mouse_genomes_project 7 110322830 110332420 - MGP_BALBcJ_P0085894 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085895.1 MGP_BALBcJ_G0032839.1 mouse_genomes_project 7 110326160 110332430 - protein_coding retained_intron MGP_BALBcJ_T0010821.1 MGP_BALBcJ_G0008946.1 mouse_genomes_project 7 16920299 16920364 + Mir3100 miRNA miRNA MGP_BALBcJ_T0002243.1 MGP_BALBcJ_G0002155.1 mouse_genomes_project 7 64935810 64936221 - TEC TEC MGP_BALBcJ_T0085812.1 MGP_BALBcJ_G0032802.1 mouse_genomes_project 7 108480656 108489360 - MGP_BALBcJ_P0085812 Olfr486 protein_coding protein_coding MGP_BALBcJ_T0083450.1 MGP_BALBcJ_G0032105.1 mouse_genomes_project 7 41688876 41691522 - MGP_BALBcJ_P0083450 1700123K08Rik protein_coding protein_coding MGP_BALBcJ_T0083995.1 MGP_BALBcJ_G0032251.1 mouse_genomes_project 7 45509577 45589088 - MGP_BALBcJ_P0083995 Abcc8 protein_coding protein_coding MGP_BALBcJ_T0083996.1 MGP_BALBcJ_G0032251.1 mouse_genomes_project 7 45509578 45589004 - MGP_BALBcJ_P0083996 Abcc8 protein_coding unknown_likely_coding MGP_BALBcJ_T0085658.1 MGP_BALBcJ_G0032737.1 mouse_genomes_project 7 105528196 105532367 + MGP_BALBcJ_P0085658 Cnga4 protein_coding protein_coding MGP_BALBcJ_T0083760.1 MGP_BALBcJ_G0032190.1 mouse_genomes_project 7 44463741 44474455 - MGP_BALBcJ_P0083760 Fcgrt protein_coding protein_coding MGP_BALBcJ_T0085661.1 MGP_BALBcJ_G0032739.1 mouse_genomes_project 7 105604554 105606145 - MGP_BALBcJ_P0085661 Prkcdbp protein_coding protein_coding MGP_BALBcJ_T0010865.1 MGP_BALBcJ_G0008990.1 mouse_genomes_project 7 61231528 61231626 - Gm23917 miRNA miRNA MGP_BALBcJ_T0083516.1 MGP_BALBcJ_G0032124.1 mouse_genomes_project 7 42878724 42893313 + MGP_BALBcJ_P0083516 Ceacam18 protein_coding protein_coding MGP_BALBcJ_T0087301.1 MGP_BALBcJ_G0033113.1 mouse_genomes_project 7 135551736 135609294 - MGP_BALBcJ_P0087301 Fam196a protein_coding protein_coding MGP_BALBcJ_T0010883.1 MGP_BALBcJ_G0009008.1 mouse_genomes_project 7 79209910 79210000 + Mir9-3 miRNA miRNA MGP_BALBcJ_T0087347.1 MGP_BALBcJ_G0033130.1 mouse_genomes_project 7 139786467 139890243 - MGP_BALBcJ_P0087347 Stk32c protein_coding protein_coding MGP_BALBcJ_T0087348.1 MGP_BALBcJ_G0033130.1 mouse_genomes_project 7 139786467 139865769 - MGP_BALBcJ_P0087348 Stk32c protein_coding protein_coding MGP_BALBcJ_T0010808.1 MGP_BALBcJ_G0008933.1 mouse_genomes_project 7 118671 118733 - Mir292b miRNA miRNA MGP_BALBcJ_T0018365.1 MGP_BALBcJ_G0015621.1 mouse_genomes_project 7 98102039 98104196 + Gm16938 processed_transcript processed_transcript MGP_BALBcJ_T0018366.1 MGP_BALBcJ_G0015621.1 mouse_genomes_project 7 98102086 98104196 + Gm16938 processed_transcript processed_transcript MGP_BALBcJ_T0101363.1 MGP_BALBcJ_G0039399.1 mouse_genomes_project 7 128026004 128026134 + Snora30 snoRNA snoRNA MGP_BALBcJ_T0008806.1 MGP_BALBcJ_G0007111.1 mouse_genomes_project 7 29283991 29285413 + Gm29440 lincRNA lincRNA MGP_BALBcJ_T0081618.1 MGP_BALBcJ_G0031632.1 mouse_genomes_project 7 10230160 10240798 + Zfp128 protein_coding retained_intron MGP_BALBcJ_T0081619.1 MGP_BALBcJ_G0031632.1 mouse_genomes_project 7 10230160 10242845 + MGP_BALBcJ_P0081619 Zfp128 protein_coding protein_coding MGP_BALBcJ_T0002298.1 MGP_BALBcJ_G0002209.1 mouse_genomes_project 7 125535037 125537504 - TEC TEC MGP_BALBcJ_T0102769.1 MGP_BALBcJ_G0040584.1 mouse_genomes_project 7 47867308 47868173 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082468.1 MGP_BALBcJ_G0031883.1 mouse_genomes_project 7 25404820 25418170 - MGP_BALBcJ_P0082468 Gm21983 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081292.1 MGP_BALBcJ_G0031517.1 mouse_genomes_project 7 638359 649329 - MGP_BALBcJ_P0081292 protein_coding protein_coding MGP_BALBcJ_T0008884.1 MGP_BALBcJ_G0007171.1 mouse_genomes_project 7 70986961 70996429 + lincRNA lincRNA MGP_BALBcJ_T0087250.1 MGP_BALBcJ_G0033103.1 mouse_genomes_project 7 134216765 134232028 - MGP_BALBcJ_P0087250 Tex36 protein_coding protein_coding MGP_BALBcJ_T0015758.1 MGP_BALBcJ_G0013855.1 mouse_genomes_project 7 38610646 38611110 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005180.1 MGP_BALBcJ_G0004411.1 mouse_genomes_project 7 36465431 36467986 + 4930505M18Rik antisense antisense MGP_BALBcJ_T0083298.1 MGP_BALBcJ_G0032071.1 mouse_genomes_project 7 33944003 33946940 - Lrp3 protein_coding processed_transcript MGP_BALBcJ_T0083299.1 MGP_BALBcJ_G0032071.1 mouse_genomes_project 7 33944854 33947206 - Lrp3 protein_coding retained_intron MGP_BALBcJ_T0083300.1 MGP_BALBcJ_G0032071.1 mouse_genomes_project 7 33944854 33959874 - MGP_BALBcJ_P0083300 Lrp3 protein_coding protein_coding MGP_BALBcJ_T0083301.1 MGP_BALBcJ_G0032071.1 mouse_genomes_project 7 33944855 33959297 - MGP_BALBcJ_P0083301 Lrp3 protein_coding protein_coding MGP_BALBcJ_T0083764.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44512262 44526867 - Aldh16a1 protein_coding retained_intron MGP_BALBcJ_T0083765.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44512743 44526914 - MGP_BALBcJ_P0083765 Aldh16a1 protein_coding protein_coding MGP_BALBcJ_T0083766.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44513673 44516528 - MGP_BALBcJ_P0083766 Aldh16a1 protein_coding protein_coding MGP_BALBcJ_T0083767.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44514283 44526925 - MGP_BALBcJ_P0083767 Aldh16a1 protein_coding protein_coding MGP_BALBcJ_T0083768.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44514617 44516562 - Aldh16a1 protein_coding processed_transcript MGP_BALBcJ_T0083769.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44516890 44517872 - Aldh16a1 protein_coding retained_intron MGP_BALBcJ_T0083770.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44519235 44526831 - Aldh16a1 protein_coding processed_transcript MGP_BALBcJ_T0083771.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44519296 44526788 - Aldh16a1 protein_coding processed_transcript MGP_BALBcJ_T0083772.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44519375 44519688 - Aldh16a1 protein_coding processed_transcript MGP_BALBcJ_T0083773.1 MGP_BALBcJ_G0032194.1 mouse_genomes_project 7 44519720 44520994 - Aldh16a1 protein_coding retained_intron MGP_BALBcJ_T0086300.1 MGP_BALBcJ_G0032932.1 mouse_genomes_project 7 122218343 122253347 + MGP_BALBcJ_P0086300 Scnn1g protein_coding protein_coding MGP_BALBcJ_T0081669.1 MGP_BALBcJ_G0031644.1 mouse_genomes_project 7 10444180 10445107 - MGP_BALBcJ_P0081669 Vmn1r85 protein_coding protein_coding MGP_BALBcJ_T0010879.1 MGP_BALBcJ_G0009004.1 mouse_genomes_project 7 65966867 65966925 - Mir7057 miRNA miRNA MGP_BALBcJ_T0018342.1 MGP_BALBcJ_G0015614.1 mouse_genomes_project 7 69985404 70032691 + processed_transcript antisense MGP_BALBcJ_T0018343.1 MGP_BALBcJ_G0015614.1 mouse_genomes_project 7 70006920 70032695 + processed_transcript retained_intron MGP_BALBcJ_T0018344.1 MGP_BALBcJ_G0015614.1 mouse_genomes_project 7 70006920 70023814 + processed_transcript antisense MGP_BALBcJ_T0018345.1 MGP_BALBcJ_G0015614.1 mouse_genomes_project 7 70009006 70009544 + processed_transcript processed_transcript MGP_BALBcJ_T0082113.1 MGP_BALBcJ_G0031784.1 mouse_genomes_project 7 17816928 17817658 + MGP_BALBcJ_P0082113 protein_coding protein_coding MGP_BALBcJ_T0085495.1 MGP_BALBcJ_G0032616.1 mouse_genomes_project 7 102930708 102931592 - MGP_BALBcJ_P0085495 Olfr566 protein_coding protein_coding MGP_BALBcJ_T0085051.1 MGP_BALBcJ_G0032507.1 mouse_genomes_project 7 97271038 97291978 + MGP_BALBcJ_P0085051 Alg8 protein_coding protein_coding MGP_BALBcJ_T0085052.1 MGP_BALBcJ_G0032507.1 mouse_genomes_project 7 97286455 97291544 + Alg8 protein_coding retained_intron MGP_BALBcJ_T0085053.1 MGP_BALBcJ_G0032507.1 mouse_genomes_project 7 97286712 97291878 + Alg8 protein_coding processed_transcript MGP_BALBcJ_T0085054.1 MGP_BALBcJ_G0032507.1 mouse_genomes_project 7 97287040 97291441 + Alg8 protein_coding processed_transcript MGP_BALBcJ_T0085055.1 MGP_BALBcJ_G0032507.1 mouse_genomes_project 7 97287860 97291602 + Alg8 protein_coding retained_intron MGP_BALBcJ_T0085056.1 MGP_BALBcJ_G0032507.1 mouse_genomes_project 7 97290569 97291685 + Alg8 protein_coding retained_intron MGP_BALBcJ_T0102717.1 MGP_BALBcJ_G0040532.1 mouse_genomes_project 7 22969871 22970457 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085494.1 MGP_BALBcJ_G0032615.1 mouse_genomes_project 7 102842635 102843706 + MGP_BALBcJ_P0085494 Olfr561 protein_coding protein_coding MGP_BALBcJ_T0082130.1 MGP_BALBcJ_G0031798.1 mouse_genomes_project 7 21956514 21957668 + MGP_BALBcJ_P0082130 protein_coding protein_coding MGP_BALBcJ_T0100069.1 MGP_BALBcJ_G0038105.1 mouse_genomes_project 7 61562117 61562224 - Gm23431 snRNA snRNA MGP_BALBcJ_T0086414.1 MGP_BALBcJ_G0032954.1 mouse_genomes_project 7 125913051 125930670 + MGP_BALBcJ_P0086414 Kdm8 protein_coding protein_coding MGP_BALBcJ_T0086415.1 MGP_BALBcJ_G0032954.1 mouse_genomes_project 7 125913059 125928426 + MGP_BALBcJ_P0086415 Kdm8 protein_coding protein_coding MGP_BALBcJ_T0008834.1 MGP_BALBcJ_G0007135.1 mouse_genomes_project 7 38843762 38850894 - lincRNA lincRNA MGP_BALBcJ_T0008835.1 MGP_BALBcJ_G0007135.1 mouse_genomes_project 7 38843766 38850911 - lincRNA lincRNA MGP_BALBcJ_T0008836.1 MGP_BALBcJ_G0007135.1 mouse_genomes_project 7 38843767 38850932 - lincRNA lincRNA MGP_BALBcJ_T0087585.1 MGP_BALBcJ_G0033206.1 mouse_genomes_project 7 142035303 142066013 - MGP_BALBcJ_P0087585 Deaf1 protein_coding protein_coding MGP_BALBcJ_T0002309.1 MGP_BALBcJ_G0002220.1 mouse_genomes_project 7 128394709 128395418 + TEC TEC MGP_BALBcJ_T0100062.1 MGP_BALBcJ_G0038098.1 mouse_genomes_project 7 44628349 44628451 - Gm23585 snRNA snRNA MGP_BALBcJ_T0085205.1 MGP_BALBcJ_G0032540.1 mouse_genomes_project 7 99676154 99677634 + MGP_BALBcJ_P0085205 protein_coding protein_coding MGP_BALBcJ_T0102824.1 MGP_BALBcJ_G0040639.1 mouse_genomes_project 7 104754731 104755697 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010859.1 MGP_BALBcJ_G0008984.1 mouse_genomes_project 7 61174412 61174481 - Mir344d-1 miRNA miRNA MGP_BALBcJ_T0085261.1 MGP_BALBcJ_G0032556.1 mouse_genomes_project 7 100462419 100482244 - MGP_BALBcJ_P0085261 Dnajb13 protein_coding protein_coding MGP_BALBcJ_T0085262.1 MGP_BALBcJ_G0032556.1 mouse_genomes_project 7 100462422 100480681 - Dnajb13 protein_coding processed_transcript MGP_BALBcJ_T0085263.1 MGP_BALBcJ_G0032556.1 mouse_genomes_project 7 100462480 100479060 - Dnajb13 protein_coding processed_transcript MGP_BALBcJ_T0085352.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101701582 101761086 + Clpb protein_coding retained_intron MGP_BALBcJ_T0085353.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101701582 101828177 + MGP_BALBcJ_P0085353 Clpb protein_coding protein_coding MGP_BALBcJ_T0085354.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101701654 101825822 + MGP_BALBcJ_P0085354 Clpb protein_coding protein_coding MGP_BALBcJ_T0085355.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101701706 101727133 + Clpb protein_coding retained_intron MGP_BALBcJ_T0085356.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101701724 101744716 + MGP_BALBcJ_P0085356 Clpb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085357.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101701725 101824903 + Clpb protein_coding retained_intron MGP_BALBcJ_T0085358.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101720291 101801719 + MGP_BALBcJ_P0085358 Clpb protein_coding protein_coding MGP_BALBcJ_T0085359.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101721379 101789625 + MGP_BALBcJ_P0085359 Clpb protein_coding protein_coding MGP_BALBcJ_T0085360.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101801602 101807408 + Clpb protein_coding processed_transcript MGP_BALBcJ_T0085361.1 MGP_BALBcJ_G0032573.1 mouse_genomes_project 7 101801629 101823648 + Clpb protein_coding processed_transcript MGP_BALBcJ_T0008795.1 MGP_BALBcJ_G0007102.1 mouse_genomes_project 7 23202887 23207058 + D930028M14Rik lincRNA lincRNA MGP_BALBcJ_T0008796.1 MGP_BALBcJ_G0007102.1 mouse_genomes_project 7 23205499 23206650 + D930028M14Rik lincRNA lincRNA MGP_BALBcJ_T0015813.1 MGP_BALBcJ_G0013910.1 mouse_genomes_project 7 74510906 74511036 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084007.1 MGP_BALBcJ_G0032255.1 mouse_genomes_project 7 45809501 45847432 + MGP_BALBcJ_P0084007 Kcnc1 protein_coding protein_coding MGP_BALBcJ_T0084008.1 MGP_BALBcJ_G0032255.1 mouse_genomes_project 7 45810652 45852469 + MGP_BALBcJ_P0084008 Kcnc1 protein_coding protein_coding MGP_BALBcJ_T0084009.1 MGP_BALBcJ_G0032255.1 mouse_genomes_project 7 45836190 45841881 + Kcnc1 protein_coding processed_transcript MGP_BALBcJ_T0100107.1 MGP_BALBcJ_G0038143.1 mouse_genomes_project 7 139875864 139875963 - Gm27975 snRNA snRNA MGP_BALBcJ_T0101308.1 MGP_BALBcJ_G0039344.1 mouse_genomes_project 7 13497845 13497954 - Snord23 snoRNA snoRNA MGP_BALBcJ_T0083876.1 MGP_BALBcJ_G0032219.1 mouse_genomes_project 7 44902281 44903135 - Ppp1r15a protein_coding processed_transcript MGP_BALBcJ_T0083877.1 MGP_BALBcJ_G0032219.1 mouse_genomes_project 7 44902282 44905406 - MGP_BALBcJ_P0083877 Ppp1r15a protein_coding protein_coding MGP_BALBcJ_T0083878.1 MGP_BALBcJ_G0032219.1 mouse_genomes_project 7 44902287 44905284 - Ppp1r15a protein_coding retained_intron MGP_BALBcJ_T0081459.1 MGP_BALBcJ_G0031547.1 mouse_genomes_project 7 1809496 1821003 - MGP_BALBcJ_P0081459 Shisa7 protein_coding protein_coding MGP_BALBcJ_T0081460.1 MGP_BALBcJ_G0031547.1 mouse_genomes_project 7 1809497 1830256 - MGP_BALBcJ_P0081460 Shisa7 protein_coding protein_coding MGP_BALBcJ_T0081461.1 MGP_BALBcJ_G0031547.1 mouse_genomes_project 7 1811972 1830256 - MGP_BALBcJ_P0081461 Shisa7 protein_coding protein_coding MGP_BALBcJ_T0081462.1 MGP_BALBcJ_G0031547.1 mouse_genomes_project 7 1814122 1815068 - Shisa7 protein_coding retained_intron MGP_BALBcJ_T0081463.1 MGP_BALBcJ_G0031547.1 mouse_genomes_project 7 1815331 1819344 - Shisa7 protein_coding retained_intron MGP_BALBcJ_T0008880.1 MGP_BALBcJ_G0007167.1 mouse_genomes_project 7 69865916 69866720 - Gm29327 lincRNA lincRNA MGP_BALBcJ_T0086195.1 MGP_BALBcJ_G0032902.1 mouse_genomes_project 7 120059551 120089217 + MGP_BALBcJ_P0086195 Acsm1 protein_coding protein_coding MGP_BALBcJ_T0086196.1 MGP_BALBcJ_G0032902.1 mouse_genomes_project 7 120070267 120115332 + MGP_BALBcJ_P0086196 Acsm1 protein_coding protein_coding MGP_BALBcJ_T0086197.1 MGP_BALBcJ_G0032902.1 mouse_genomes_project 7 120070299 120115052 + MGP_BALBcJ_P0086197 Acsm1 protein_coding protein_coding MGP_BALBcJ_T0015691.1 MGP_BALBcJ_G0013788.1 mouse_genomes_project 7 10833312 10833634 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015851.1 MGP_BALBcJ_G0013948.1 mouse_genomes_project 7 98782034 98782398 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101974.1 MGP_BALBcJ_G0039826.1 mouse_genomes_project 7 40763428 40783555 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101975.1 MGP_BALBcJ_G0039826.1 mouse_genomes_project 7 40763441 40791501 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101976.1 MGP_BALBcJ_G0039826.1 mouse_genomes_project 7 40763463 40822329 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101977.1 MGP_BALBcJ_G0039826.1 mouse_genomes_project 7 40782012 40817663 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0087416.1 MGP_BALBcJ_G0033147.1 mouse_genomes_project 7 140788389 140798778 - MGP_BALBcJ_P0087416 Echs1 protein_coding protein_coding MGP_BALBcJ_T0087417.1 MGP_BALBcJ_G0033147.1 mouse_genomes_project 7 140788397 140798691 - Echs1 protein_coding retained_intron MGP_BALBcJ_T0087418.1 MGP_BALBcJ_G0033147.1 mouse_genomes_project 7 140788763 140795691 - MGP_BALBcJ_P0087418 Echs1 protein_coding protein_coding MGP_BALBcJ_T0087419.1 MGP_BALBcJ_G0033147.1 mouse_genomes_project 7 140791449 140798717 - Echs1 protein_coding retained_intron MGP_BALBcJ_T0087420.1 MGP_BALBcJ_G0033147.1 mouse_genomes_project 7 140791449 140798717 - Echs1 protein_coding retained_intron MGP_BALBcJ_T0087421.1 MGP_BALBcJ_G0033147.1 mouse_genomes_project 7 140794423 140798709 - Echs1 protein_coding processed_transcript MGP_BALBcJ_T0101345.1 MGP_BALBcJ_G0039381.1 mouse_genomes_project 7 99591811 99591942 - Gm25409 snoRNA snoRNA MGP_BALBcJ_T0085347.1 MGP_BALBcJ_G0032570.1 mouse_genomes_project 7 101415866 101507685 + MGP_BALBcJ_P0085347 protein_coding protein_coding MGP_BALBcJ_T0085348.1 MGP_BALBcJ_G0032570.1 mouse_genomes_project 7 101415866 101507685 + MGP_BALBcJ_P0085348 protein_coding protein_coding MGP_BALBcJ_T0085349.1 MGP_BALBcJ_G0032570.1 mouse_genomes_project 7 101415884 101507670 + MGP_BALBcJ_P0085349 protein_coding protein_coding MGP_BALBcJ_T0081749.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13679850 13681480 + Kptn protein_coding retained_intron MGP_BALBcJ_T0081750.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13679850 13687808 + MGP_BALBcJ_P0081750 Kptn protein_coding protein_coding MGP_BALBcJ_T0081751.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13679884 13680928 + Kptn protein_coding retained_intron MGP_BALBcJ_T0081752.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13680174 13684155 + Kptn protein_coding retained_intron MGP_BALBcJ_T0081753.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13680406 13680919 + Kptn protein_coding retained_intron MGP_BALBcJ_T0081754.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13683105 13684118 + Kptn protein_coding retained_intron MGP_BALBcJ_T0081755.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13683172 13684297 + Kptn protein_coding retained_intron MGP_BALBcJ_T0081756.1 MGP_BALBcJ_G0031678.1 mouse_genomes_project 7 13685703 13687656 + Kptn protein_coding retained_intron MGP_BALBcJ_T0005141.1 MGP_BALBcJ_G0004381.1 mouse_genomes_project 7 22022476 22042512 - antisense antisense MGP_BALBcJ_T0102800.1 MGP_BALBcJ_G0040615.1 mouse_genomes_project 7 86001881 86002751 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0018332.1 MGP_BALBcJ_G0015611.1 mouse_genomes_project 7 55602074 55614477 - Gm34121 processed_transcript lincRNA MGP_BALBcJ_T0018333.1 MGP_BALBcJ_G0015611.1 mouse_genomes_project 7 55610881 55614442 - Gm34121 processed_transcript retained_intron MGP_BALBcJ_T0081450.1 MGP_BALBcJ_G0031545.1 mouse_genomes_project 7 1773872 1778359 + MGP_BALBcJ_P0081450 Rpl28 protein_coding protein_coding MGP_BALBcJ_T0081451.1 MGP_BALBcJ_G0031545.1 mouse_genomes_project 7 1777204 1777632 + Rpl28 protein_coding retained_intron MGP_BALBcJ_T0081452.1 MGP_BALBcJ_G0031545.1 mouse_genomes_project 7 1777400 1778368 + MGP_BALBcJ_P0081452 Rpl28 protein_coding protein_coding MGP_BALBcJ_T0081453.1 MGP_BALBcJ_G0031545.1 mouse_genomes_project 7 1777657 1778368 + Rpl28 protein_coding retained_intron MGP_BALBcJ_T0005204.1 MGP_BALBcJ_G0004427.1 mouse_genomes_project 7 73166621 73184024 + Gm44686 antisense antisense MGP_BALBcJ_T0084924.1 MGP_BALBcJ_G0032473.1 mouse_genomes_project 7 86782472 86822663 + MGP_BALBcJ_P0084924 Vmn2r78 protein_coding protein_coding MGP_BALBcJ_T0085093.1 MGP_BALBcJ_G0032514.1 mouse_genomes_project 7 97605550 97627646 + MGP_BALBcJ_P0085093 Clns1a protein_coding protein_coding MGP_BALBcJ_T0085094.1 MGP_BALBcJ_G0032514.1 mouse_genomes_project 7 97605611 97621526 + Clns1a protein_coding retained_intron MGP_BALBcJ_T0085095.1 MGP_BALBcJ_G0032514.1 mouse_genomes_project 7 97626560 97629564 + Clns1a protein_coding retained_intron MGP_BALBcJ_T0102761.1 MGP_BALBcJ_G0040576.1 mouse_genomes_project 7 47281085 47281572 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002319.1 MGP_BALBcJ_G0002230.1 mouse_genomes_project 7 145553110 145554454 + TEC TEC MGP_BALBcJ_T0085651.1 MGP_BALBcJ_G0032736.1 mouse_genomes_project 7 105498748 105501938 + MGP_BALBcJ_P0085651 Gm5901 protein_coding protein_coding MGP_BALBcJ_T0084806.1 MGP_BALBcJ_G0032421.1 mouse_genomes_project 7 81239354 81243365 - MGP_BALBcJ_P0084806 BC048679 protein_coding protein_coding MGP_BALBcJ_T0084807.1 MGP_BALBcJ_G0032421.1 mouse_genomes_project 7 81239354 81243365 - MGP_BALBcJ_P0084807 BC048679 protein_coding protein_coding MGP_BALBcJ_T0015765.1 MGP_BALBcJ_G0013862.1 mouse_genomes_project 7 40671798 40673533 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102751.1 MGP_BALBcJ_G0040566.1 mouse_genomes_project 7 43377130 43377347 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100097.1 MGP_BALBcJ_G0038133.1 mouse_genomes_project 7 123886045 123886148 - Gm23559 snRNA snRNA MGP_BALBcJ_T0002189.1 MGP_BALBcJ_G0002101.1 mouse_genomes_project 7 407200 411727 - TEC TEC MGP_BALBcJ_T0002244.1 MGP_BALBcJ_G0002156.1 mouse_genomes_project 7 72247829 72248329 + TEC TEC MGP_BALBcJ_T0083594.1 MGP_BALBcJ_G0032152.1 mouse_genomes_project 7 43779678 43813138 + MGP_BALBcJ_P0083594 Lrrc4b protein_coding protein_coding MGP_BALBcJ_T0083595.1 MGP_BALBcJ_G0032152.1 mouse_genomes_project 7 43793806 43815128 + MGP_BALBcJ_P0083595 Lrrc4b protein_coding protein_coding MGP_BALBcJ_T0083596.1 MGP_BALBcJ_G0032152.1 mouse_genomes_project 7 43794058 43813184 + MGP_BALBcJ_P0083596 Lrrc4b protein_coding protein_coding MGP_BALBcJ_T0010844.1 MGP_BALBcJ_G0008969.1 mouse_genomes_project 7 43822123 43822188 + Mir7052 miRNA miRNA MGP_BALBcJ_T0083370.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34534204 34565659 - MGP_BALBcJ_P0083370 Zfp507 protein_coding protein_coding MGP_BALBcJ_T0083371.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34535582 34556710 - MGP_BALBcJ_P0083371 Zfp507 protein_coding protein_coding MGP_BALBcJ_T0083372.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34537829 34565637 - MGP_BALBcJ_P0083372 Zfp507 protein_coding protein_coding MGP_BALBcJ_T0083373.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34541174 34541343 - Zfp507 protein_coding processed_transcript MGP_BALBcJ_T0083374.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34553918 34565656 - MGP_BALBcJ_P0083374 Zfp507 protein_coding protein_coding MGP_BALBcJ_T0083375.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34563679 34565624 - Zfp507 protein_coding retained_intron MGP_BALBcJ_T0083376.1 MGP_BALBcJ_G0032083.1 mouse_genomes_project 7 34564686 34565673 - Zfp507 protein_coding retained_intron MGP_BALBcJ_T0015744.1 MGP_BALBcJ_G0013841.1 mouse_genomes_project 7 32126635 32126770 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086073.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116549390 116558634 - MGP_BALBcJ_P0086073 Plekha7 protein_coding unknown_likely_coding MGP_BALBcJ_T0086074.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116549392 116668859 - MGP_BALBcJ_P0086074 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086075.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116549400 116744817 - MGP_BALBcJ_P0086075 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086076.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116550025 116621372 - MGP_BALBcJ_P0086076 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086077.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116551946 116620858 - MGP_BALBcJ_P0086077 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086078.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116559751 116621135 - MGP_BALBcJ_P0086078 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086079.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116560890 116744796 - MGP_BALBcJ_P0086079 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086080.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116560987 116767936 - MGP_BALBcJ_P0086080 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086081.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116568690 116583844 - MGP_BALBcJ_P0086081 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086082.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116582020 116668713 - Plekha7 protein_coding retained_intron MGP_BALBcJ_T0086083.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116589137 116590073 - Plekha7 protein_coding retained_intron MGP_BALBcJ_T0086084.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116590449 116610407 - Plekha7 protein_coding processed_transcript MGP_BALBcJ_T0086085.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116596686 116690590 - MGP_BALBcJ_P0086085 Plekha7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086086.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116596809 116612892 - Plekha7 protein_coding processed_transcript MGP_BALBcJ_T0086087.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116601647 116744682 - MGP_BALBcJ_P0086087 Plekha7 protein_coding protein_coding MGP_BALBcJ_T0086088.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116602821 116744491 - Plekha7 protein_coding retained_intron MGP_BALBcJ_T0086089.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116602867 116606609 - Plekha7 protein_coding retained_intron MGP_BALBcJ_T0086090.1 MGP_BALBcJ_G0032877.1 mouse_genomes_project 7 116607176 116696558 - Plekha7 protein_coding processed_transcript MGP_BALBcJ_T0083745.1 MGP_BALBcJ_G0032183.1 mouse_genomes_project 7 44363583 44368674 + MGP_BALBcJ_P0083745 Irf3 protein_coding protein_coding MGP_BALBcJ_T0083746.1 MGP_BALBcJ_G0032183.1 mouse_genomes_project 7 44363883 44368218 + MGP_BALBcJ_P0083746 Irf3 protein_coding protein_coding MGP_BALBcJ_T0082146.1 MGP_BALBcJ_G0031802.1 mouse_genomes_project 7 22156513 22162429 + MGP_BALBcJ_P0082146 protein_coding protein_coding MGP_BALBcJ_T0082147.1 MGP_BALBcJ_G0031802.1 mouse_genomes_project 7 22156539 22163613 + MGP_BALBcJ_P0082147 protein_coding protein_coding MGP_BALBcJ_T0082148.1 MGP_BALBcJ_G0031802.1 mouse_genomes_project 7 22158816 22164471 + MGP_BALBcJ_P0082148 protein_coding protein_coding MGP_BALBcJ_T0010807.1 MGP_BALBcJ_G0008932.1 mouse_genomes_project 7 118662 118744 + Mir292 miRNA miRNA MGP_BALBcJ_T0085830.1 MGP_BALBcJ_G0032820.1 mouse_genomes_project 7 109194725 109195779 - MGP_BALBcJ_P0085830 Olfr517 protein_coding protein_coding MGP_BALBcJ_T0010902.1 MGP_BALBcJ_G0009027.1 mouse_genomes_project 7 127987427 127987564 + Mir7060 miRNA miRNA MGP_BALBcJ_T0084293.1 MGP_BALBcJ_G0032329.1 mouse_genomes_project 7 64002960 64009113 + Mcee protein_coding processed_transcript MGP_BALBcJ_T0084294.1 MGP_BALBcJ_G0032329.1 mouse_genomes_project 7 64002997 64022599 + MGP_BALBcJ_P0084294 Mcee protein_coding protein_coding MGP_BALBcJ_T0084295.1 MGP_BALBcJ_G0032329.1 mouse_genomes_project 7 64003092 64022595 + MGP_BALBcJ_P0084295 Mcee protein_coding protein_coding MGP_BALBcJ_T0084296.1 MGP_BALBcJ_G0032329.1 mouse_genomes_project 7 64003127 64022595 + MGP_BALBcJ_P0084296 Mcee protein_coding protein_coding MGP_BALBcJ_T0082751.1 MGP_BALBcJ_G0031955.1 mouse_genomes_project 7 27317868 27452637 - MGP_BALBcJ_P0082751 Ryr1 protein_coding protein_coding MGP_BALBcJ_T0082752.1 MGP_BALBcJ_G0031955.1 mouse_genomes_project 7 27317872 27452637 - MGP_BALBcJ_P0082752 Ryr1 protein_coding protein_coding MGP_BALBcJ_T0082753.1 MGP_BALBcJ_G0031955.1 mouse_genomes_project 7 27356110 27452501 - MGP_BALBcJ_P0082753 Ryr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0010809.1 MGP_BALBcJ_G0008934.1 mouse_genomes_project 7 118954 119031 + Mir291b miRNA miRNA MGP_BALBcJ_T0083665.1 MGP_BALBcJ_G0032162.1 mouse_genomes_project 7 43948018 43961879 + MGP_BALBcJ_P0083665 Kcnc3 protein_coding protein_coding MGP_BALBcJ_T0083666.1 MGP_BALBcJ_G0032162.1 mouse_genomes_project 7 43948018 43961879 + MGP_BALBcJ_P0083666 Kcnc3 protein_coding protein_coding MGP_BALBcJ_T0083667.1 MGP_BALBcJ_G0032162.1 mouse_genomes_project 7 43948252 43958018 + MGP_BALBcJ_P0083667 Kcnc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0085126.1 MGP_BALBcJ_G0032521.1 mouse_genomes_project 7 98117412 98124476 - MGP_BALBcJ_P0085126 B3gnt6 protein_coding protein_coding MGP_BALBcJ_T0082512.1 MGP_BALBcJ_G0031891.1 mouse_genomes_project 7 25550966 25572599 - MGP_BALBcJ_P0082512 Ltbp4 protein_coding protein_coding MGP_BALBcJ_T0009001.1 MGP_BALBcJ_G0007247.1 mouse_genomes_project 7 127326713 127335712 + Gm44854 lincRNA lincRNA MGP_BALBcJ_T0084198.1 MGP_BALBcJ_G0032306.1 mouse_genomes_project 7 55542333 55585086 - MGP_BALBcJ_P0084198 Nipa1 protein_coding protein_coding MGP_BALBcJ_T0083555.1 MGP_BALBcJ_G0032145.1 mouse_genomes_project 7 43350379 43354378 + MGP_BALBcJ_P0083555 Klk1b11 protein_coding protein_coding MGP_BALBcJ_T0008774.1 MGP_BALBcJ_G0007083.1 mouse_genomes_project 7 284173 299921 - Gm44257 lincRNA lincRNA MGP_BALBcJ_T0009016.1 MGP_BALBcJ_G0007254.1 mouse_genomes_project 7 129008642 129020836 - Gm45018 lincRNA lincRNA MGP_BALBcJ_T0011677.1 MGP_BALBcJ_G0009802.1 mouse_genomes_project 7 127684340 127684555 + Gm25735 misc_RNA misc_RNA MGP_BALBcJ_T0100067.1 MGP_BALBcJ_G0038103.1 mouse_genomes_project 7 54809652 54809759 - Gm24116 snRNA snRNA MGP_BALBcJ_T0082129.1 MGP_BALBcJ_G0031797.1 mouse_genomes_project 7 21956487 21957528 + MGP_BALBcJ_P0082129 protein_coding protein_coding MGP_BALBcJ_T0087730.1 MGP_BALBcJ_G0033228.1 mouse_genomes_project 7 142794669 142810931 - MGP_BALBcJ_P0087730 Dusp8 protein_coding protein_coding MGP_BALBcJ_T0087731.1 MGP_BALBcJ_G0033228.1 mouse_genomes_project 7 142799266 142811502 - MGP_BALBcJ_P0087731 Dusp8 protein_coding protein_coding MGP_BALBcJ_T0085520.1 MGP_BALBcJ_G0032639.1 mouse_genomes_project 7 103469333 103470281 + MGP_BALBcJ_P0085520 Olfr599 protein_coding protein_coding MGP_BALBcJ_T0085900.1 MGP_BALBcJ_G0032843.1 mouse_genomes_project 7 110468874 110488769 + MGP_BALBcJ_P0085900 Wee1 protein_coding protein_coding MGP_BALBcJ_T0101367.1 MGP_BALBcJ_G0039403.1 mouse_genomes_project 7 142878010 142878104 + Gm25370 snoRNA snoRNA MGP_BALBcJ_T0087157.1 MGP_BALBcJ_G0033079.1 mouse_genomes_project 7 131487610 131531424 + Htra1 protein_coding retained_intron MGP_BALBcJ_T0087158.1 MGP_BALBcJ_G0033079.1 mouse_genomes_project 7 131487702 131537150 + MGP_BALBcJ_P0087158 Htra1 protein_coding protein_coding MGP_BALBcJ_T0087159.1 MGP_BALBcJ_G0033079.1 mouse_genomes_project 7 131494968 131537150 + Htra1 protein_coding processed_transcript MGP_BALBcJ_T0087160.1 MGP_BALBcJ_G0033079.1 mouse_genomes_project 7 131533159 131533933 + Htra1 protein_coding retained_intron MGP_BALBcJ_T0087161.1 MGP_BALBcJ_G0033079.1 mouse_genomes_project 7 131534219 131536886 + Htra1 protein_coding processed_transcript MGP_BALBcJ_T0100059.1 MGP_BALBcJ_G0038095.1 mouse_genomes_project 7 36983252 36983310 - Gm22203 snRNA snRNA MGP_BALBcJ_T0018327.1 MGP_BALBcJ_G0015608.1 mouse_genomes_project 7 48437182 48445128 + processed_transcript processed_transcript MGP_BALBcJ_T0018328.1 MGP_BALBcJ_G0015608.1 mouse_genomes_project 7 48440524 48445775 + processed_transcript processed_transcript MGP_BALBcJ_T0086809.1 MGP_BALBcJ_G0033021.1 mouse_genomes_project 7 127914590 127917651 - Zfp688 protein_coding retained_intron MGP_BALBcJ_T0086810.1 MGP_BALBcJ_G0033021.1 mouse_genomes_project 7 127914590 127917663 - MGP_BALBcJ_P0086810 Zfp688 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086811.1 MGP_BALBcJ_G0033021.1 mouse_genomes_project 7 127914590 127917658 - MGP_BALBcJ_P0086811 Zfp688 protein_coding protein_coding MGP_BALBcJ_T0086812.1 MGP_BALBcJ_G0033021.1 mouse_genomes_project 7 127914592 127917692 - Zfp688 protein_coding retained_intron MGP_BALBcJ_T0086813.1 MGP_BALBcJ_G0033021.1 mouse_genomes_project 7 127914969 127917474 - MGP_BALBcJ_P0086813 Zfp688 protein_coding protein_coding MGP_BALBcJ_T0086814.1 MGP_BALBcJ_G0033021.1 mouse_genomes_project 7 127915214 127917591 - MGP_BALBcJ_P0086814 Zfp688 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002227.1 MGP_BALBcJ_G0002139.1 mouse_genomes_project 7 54604848 54607022 + TEC TEC MGP_BALBcJ_T0002252.1 MGP_BALBcJ_G0002163.1 mouse_genomes_project 7 73382685 73382842 + TEC TEC MGP_BALBcJ_T0085568.1 MGP_BALBcJ_G0032684.1 mouse_genomes_project 7 104219594 104220539 - MGP_BALBcJ_P0085568 protein_coding protein_coding MGP_BALBcJ_T0081203.1 MGP_BALBcJ_G0031500.1 mouse_genomes_project 7 239157 274409 + MGP_BALBcJ_P0081203 Cacng7 protein_coding protein_coding MGP_BALBcJ_T0081204.1 MGP_BALBcJ_G0031500.1 mouse_genomes_project 7 244650 273135 + Cacng7 protein_coding retained_intron MGP_BALBcJ_T0087739.1 MGP_BALBcJ_G0033236.1 mouse_genomes_project 7 143055072 143056070 + MGP_BALBcJ_P0087739 protein_coding protein_coding MGP_BALBcJ_T0008778.1 MGP_BALBcJ_G0007087.1 mouse_genomes_project 7 664943 668939 - Gm44581 lincRNA lincRNA MGP_BALBcJ_T0086240.1 MGP_BALBcJ_G0032914.1 mouse_genomes_project 7 120658284 120674004 - MGP_BALBcJ_P0086240 Crym protein_coding protein_coding MGP_BALBcJ_T0086241.1 MGP_BALBcJ_G0032914.1 mouse_genomes_project 7 120669033 120674004 - Crym protein_coding retained_intron MGP_BALBcJ_T0008881.1 MGP_BALBcJ_G0007168.1 mouse_genomes_project 7 69992278 70009112 - Gm28258 lincRNA lincRNA MGP_BALBcJ_T0083917.1 MGP_BALBcJ_G0032231.1 mouse_genomes_project 7 45090582 45095378 + MGP_BALBcJ_P0083917 Car11 protein_coding protein_coding MGP_BALBcJ_T0083923.1 MGP_BALBcJ_G0032233.1 mouse_genomes_project 7 45100184 45108721 - MGP_BALBcJ_P0083923 Sphk2 protein_coding protein_coding MGP_BALBcJ_T0083924.1 MGP_BALBcJ_G0032233.1 mouse_genomes_project 7 45100984 45108621 - MGP_BALBcJ_P0083924 Sphk2 protein_coding protein_coding MGP_BALBcJ_T0083925.1 MGP_BALBcJ_G0032233.1 mouse_genomes_project 7 45101002 45105925 - MGP_BALBcJ_P0083925 Sphk2 protein_coding protein_coding MGP_BALBcJ_T0081567.1 MGP_BALBcJ_G0031598.1 mouse_genomes_project 7 4097557 4104780 + MGP_BALBcJ_P0081567 Aurkc protein_coding protein_coding MGP_BALBcJ_T0084596.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79428555 79441747 - MGP_BALBcJ_P0084596 Plin1 protein_coding protein_coding MGP_BALBcJ_T0084597.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79429462 79441131 - MGP_BALBcJ_P0084597 Plin1 protein_coding protein_coding MGP_BALBcJ_T0084598.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79429462 79441736 - MGP_BALBcJ_P0084598 Plin1 protein_coding protein_coding MGP_BALBcJ_T0084599.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79430679 79431587 - MGP_BALBcJ_P0084599 Plin1 protein_coding protein_coding MGP_BALBcJ_T0084600.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79433418 79438825 - MGP_BALBcJ_P0084600 Plin1 protein_coding protein_coding MGP_BALBcJ_T0084601.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79435475 79441795 - MGP_BALBcJ_P0084601 Plin1 protein_coding protein_coding MGP_BALBcJ_T0084602.1 MGP_BALBcJ_G0032384.1 mouse_genomes_project 7 79437942 79441863 - MGP_BALBcJ_P0084602 Plin1 protein_coding protein_coding MGP_BALBcJ_T0002194.1 MGP_BALBcJ_G0002106.1 mouse_genomes_project 7 16684956 16686193 + TEC TEC MGP_BALBcJ_T0008896.1 MGP_BALBcJ_G0007182.1 mouse_genomes_project 7 72828402 72859436 - Gm30075 lincRNA lincRNA MGP_BALBcJ_T0082449.1 MGP_BALBcJ_G0031876.1 mouse_genomes_project 7 24971909 24994733 + MGP_BALBcJ_P0082449 Cyp2g1 protein_coding protein_coding MGP_BALBcJ_T0082450.1 MGP_BALBcJ_G0031876.1 mouse_genomes_project 7 24979267 24990479 + Cyp2g1 protein_coding retained_intron MGP_BALBcJ_T0087446.1 MGP_BALBcJ_G0033163.1 mouse_genomes_project 7 141183038 141184029 + MGP_BALBcJ_P0087446 Olfr535 protein_coding protein_coding MGP_BALBcJ_T0010904.1 MGP_BALBcJ_G0009029.1 mouse_genomes_project 7 128204302 128204378 + Mir762 miRNA miRNA MGP_BALBcJ_T0081291.1 MGP_BALBcJ_G0031516.1 mouse_genomes_project 7 635950 791803 - MGP_BALBcJ_P0081291 protein_coding protein_coding MGP_BALBcJ_T0082623.1 MGP_BALBcJ_G0031923.1 mouse_genomes_project 7 26587255 26593807 - MGP_BALBcJ_P0082623 Timm50 protein_coding protein_coding MGP_BALBcJ_T0082624.1 MGP_BALBcJ_G0031923.1 mouse_genomes_project 7 26587561 26588402 - Timm50 protein_coding retained_intron MGP_BALBcJ_T0082625.1 MGP_BALBcJ_G0031923.1 mouse_genomes_project 7 26588165 26589756 - Timm50 protein_coding retained_intron MGP_BALBcJ_T0082626.1 MGP_BALBcJ_G0031923.1 mouse_genomes_project 7 26591243 26593772 - Timm50 protein_coding retained_intron MGP_BALBcJ_T0082627.1 MGP_BALBcJ_G0031923.1 mouse_genomes_project 7 26591953 26593791 - Timm50 protein_coding retained_intron MGP_BALBcJ_T0082628.1 MGP_BALBcJ_G0031923.1 mouse_genomes_project 7 26592650 26593674 - Timm50 protein_coding processed_transcript MGP_BALBcJ_T0102808.1 MGP_BALBcJ_G0040623.1 mouse_genomes_project 7 103257109 103258051 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005131.1 MGP_BALBcJ_G0004374.1 mouse_genomes_project 7 16819880 16820646 - Gm45058 antisense antisense MGP_BALBcJ_T0002211.1 MGP_BALBcJ_G0002123.1 mouse_genomes_project 7 36455039 36458299 - TEC TEC MGP_BALBcJ_T0010822.1 MGP_BALBcJ_G0008947.1 mouse_genomes_project 7 17015674 17015772 + Mir330 miRNA miRNA MGP_BALBcJ_T0081556.1 MGP_BALBcJ_G0031595.1 mouse_genomes_project 7 3769866 3795341 - MGP_BALBcJ_P0081556 Zim1 protein_coding protein_coding MGP_BALBcJ_T0081557.1 MGP_BALBcJ_G0031595.1 mouse_genomes_project 7 3774911 3795320 - MGP_BALBcJ_P0081557 Zim1 protein_coding protein_coding MGP_BALBcJ_T0081558.1 MGP_BALBcJ_G0031595.1 mouse_genomes_project 7 3775827 3787577 - MGP_BALBcJ_P0081558 Zim1 protein_coding protein_coding MGP_BALBcJ_T0084032.1 MGP_BALBcJ_G0032260.1 mouse_genomes_project 7 46147874 46152401 - MGP_BALBcJ_P0084032 Saa4 protein_coding protein_coding MGP_BALBcJ_T0010825.1 MGP_BALBcJ_G0008950.1 mouse_genomes_project 7 22342838 22342964 - Gm27592 miRNA miRNA MGP_BALBcJ_T0008997.1 MGP_BALBcJ_G0007244.1 mouse_genomes_project 7 126822815 126826041 - Gm45142 lincRNA lincRNA MGP_BALBcJ_T0008998.1 MGP_BALBcJ_G0007244.1 mouse_genomes_project 7 126825066 126826063 - Gm45142 lincRNA lincRNA MGP_BALBcJ_T0015729.1 MGP_BALBcJ_G0013826.1 mouse_genomes_project 7 23924960 23925248 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086200.1 MGP_BALBcJ_G0032904.1 mouse_genomes_project 7 120171197 120176529 - MGP_BALBcJ_P0086200 Thumpd1 protein_coding protein_coding MGP_BALBcJ_T0081896.1 MGP_BALBcJ_G0031721.1 mouse_genomes_project 7 16359756 16371071 - MGP_BALBcJ_P0081896 Psg27 protein_coding protein_coding MGP_BALBcJ_T0082122.1 MGP_BALBcJ_G0031790.1 mouse_genomes_project 7 21509251 21510230 + MGP_BALBcJ_P0082122 Vmn1r176 protein_coding protein_coding MGP_BALBcJ_T0083151.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475479 29479398 - MGP_BALBcJ_P0083151 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083152.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475479 29479213 - MGP_BALBcJ_P0083152 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083153.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475481 29477334 - Fxyd1 protein_coding retained_intron MGP_BALBcJ_T0083154.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475481 29479471 - MGP_BALBcJ_P0083154 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083155.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475481 29478602 - MGP_BALBcJ_P0083155 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083156.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475482 29476924 - MGP_BALBcJ_P0083156 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083157.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475482 29479460 - MGP_BALBcJ_P0083157 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083158.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475483 29475995 - Fxyd1 protein_coding retained_intron MGP_BALBcJ_T0083159.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475483 29478609 - MGP_BALBcJ_P0083159 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083160.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475483 29478590 - MGP_BALBcJ_P0083160 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083161.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475484 29478620 - MGP_BALBcJ_P0083161 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083162.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475509 29479386 - MGP_BALBcJ_P0083162 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083163.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475529 29478621 - MGP_BALBcJ_P0083163 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083164.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475736 29479512 - MGP_BALBcJ_P0083164 Fxyd1 protein_coding protein_coding MGP_BALBcJ_T0083165.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29475929 29477847 - Fxyd1 protein_coding retained_intron MGP_BALBcJ_T0083166.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29477290 29479427 - Fxyd1 protein_coding retained_intron MGP_BALBcJ_T0083167.1 MGP_BALBcJ_G0032042.1 mouse_genomes_project 7 29477564 29480933 - Fxyd1 protein_coding retained_intron MGP_BALBcJ_T0082930.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700009 28701890 + Syne4 protein_coding processed_transcript MGP_BALBcJ_T0082931.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700018 28704617 + MGP_BALBcJ_P0082931 Syne4 protein_coding protein_coding MGP_BALBcJ_T0082932.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700073 28700941 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082933.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700082 28702324 + MGP_BALBcJ_P0082933 Syne4 protein_coding protein_coding MGP_BALBcJ_T0082934.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700087 28702093 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082935.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700090 28702318 + MGP_BALBcJ_P0082935 Syne4 protein_coding protein_coding MGP_BALBcJ_T0082936.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700118 28704617 + MGP_BALBcJ_P0082936 Syne4 protein_coding protein_coding MGP_BALBcJ_T0082937.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700380 28701578 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082938.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28700541 28702922 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082939.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28701251 28702100 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082940.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28702004 28704617 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082941.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28702174 28704613 + MGP_BALBcJ_P0082941 Syne4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082942.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28702219 28704616 + MGP_BALBcJ_P0082942 Syne4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082943.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28702220 28704611 + MGP_BALBcJ_P0082943 Syne4 protein_coding protein_coding MGP_BALBcJ_T0082944.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28702252 28704615 + MGP_BALBcJ_P0082944 Syne4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082945.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28702472 28704611 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0082946.1 MGP_BALBcJ_G0031997.1 mouse_genomes_project 7 28703337 28704611 + Syne4 protein_coding retained_intron MGP_BALBcJ_T0083360.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34445283 34515573 - MGP_BALBcJ_P0083360 Dpy19l3 protein_coding protein_coding MGP_BALBcJ_T0083361.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34450853 34468158 - MGP_BALBcJ_P0083361 Dpy19l3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083362.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34467289 34468631 - Dpy19l3 protein_coding retained_intron MGP_BALBcJ_T0083363.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34467698 34468717 - Dpy19l3 protein_coding retained_intron MGP_BALBcJ_T0083364.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34474253 34489689 - MGP_BALBcJ_P0083364 Dpy19l3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083365.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34476062 34483604 - Dpy19l3 protein_coding retained_intron MGP_BALBcJ_T0083366.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34479567 34485400 - Dpy19l3 protein_coding processed_transcript MGP_BALBcJ_T0083367.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34485414 34489733 - Dpy19l3 protein_coding retained_intron MGP_BALBcJ_T0083368.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34489634 34515518 - Dpy19l3 protein_coding processed_transcript MGP_BALBcJ_T0083369.1 MGP_BALBcJ_G0032082.1 mouse_genomes_project 7 34512418 34515474 - Dpy19l3 protein_coding retained_intron MGP_BALBcJ_T0002273.1 MGP_BALBcJ_G0002184.1 mouse_genomes_project 7 79308148 79309817 - TEC TEC MGP_BALBcJ_T0087911.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144622209 144640954 + MGP_BALBcJ_P0087911 Dhcr7 protein_coding protein_coding MGP_BALBcJ_T0087912.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144622397 144640949 + MGP_BALBcJ_P0087912 Dhcr7 protein_coding protein_coding MGP_BALBcJ_T0087913.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144622554 144637898 + MGP_BALBcJ_P0087913 Dhcr7 protein_coding protein_coding MGP_BALBcJ_T0087914.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144622558 144635475 + MGP_BALBcJ_P0087914 Dhcr7 protein_coding protein_coding MGP_BALBcJ_T0087915.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144622578 144630209 + Dhcr7 protein_coding processed_transcript MGP_BALBcJ_T0087916.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144633257 144635628 + Dhcr7 protein_coding processed_transcript MGP_BALBcJ_T0087917.1 MGP_BALBcJ_G0033267.1 mouse_genomes_project 7 144633662 144639738 + Dhcr7 protein_coding processed_transcript MGP_BALBcJ_T0002313.1 MGP_BALBcJ_G0002224.1 mouse_genomes_project 7 134728906 134733364 - TEC TEC MGP_BALBcJ_T0087662.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142197634 142203209 + MGP_BALBcJ_P0087662 Pnpla2 protein_coding protein_coding MGP_BALBcJ_T0087663.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142197642 142202558 + MGP_BALBcJ_P0087663 Pnpla2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087664.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142197643 142202560 + MGP_BALBcJ_P0087664 Pnpla2 protein_coding protein_coding MGP_BALBcJ_T0087665.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142197655 142201404 + MGP_BALBcJ_P0087665 Pnpla2 protein_coding protein_coding MGP_BALBcJ_T0087666.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142197665 142202569 + MGP_BALBcJ_P0087666 Pnpla2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087667.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142198043 142200588 + MGP_BALBcJ_P0087667 Pnpla2 protein_coding protein_coding MGP_BALBcJ_T0087668.1 MGP_BALBcJ_G0033215.1 mouse_genomes_project 7 142199454 142201152 + MGP_BALBcJ_P0087668 Pnpla2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087201.1 MGP_BALBcJ_G0033095.1 mouse_genomes_project 7 133158970 133177894 - MGP_BALBcJ_P0087201 Oat protein_coding protein_coding MGP_BALBcJ_T0010838.1 MGP_BALBcJ_G0008963.1 mouse_genomes_project 7 28480674 28480770 - Gm23368 miRNA miRNA MGP_BALBcJ_T0101346.1 MGP_BALBcJ_G0039382.1 mouse_genomes_project 7 102797161 102797294 - Gm24210 snoRNA snoRNA MGP_BALBcJ_T0087093.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130101399 130145215 + MGP_BALBcJ_P0087093 Wdr11 protein_coding protein_coding MGP_BALBcJ_T0087094.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130101444 130135117 + Wdr11 protein_coding retained_intron MGP_BALBcJ_T0087095.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130101454 130121779 + Wdr11 protein_coding retained_intron MGP_BALBcJ_T0087096.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130102604 130142332 + MGP_BALBcJ_P0087096 Wdr11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087097.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130114554 130117285 + Wdr11 protein_coding processed_transcript MGP_BALBcJ_T0087098.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130116045 130145213 + Wdr11 protein_coding retained_intron MGP_BALBcJ_T0087099.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130117283 130123529 + MGP_BALBcJ_P0087099 Wdr11 protein_coding protein_coding MGP_BALBcJ_T0087100.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130134532 130145211 + Wdr11 protein_coding retained_intron MGP_BALBcJ_T0087101.1 MGP_BALBcJ_G0033072.1 mouse_genomes_project 7 130138509 130143148 + MGP_BALBcJ_P0087101 Wdr11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084739.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80439400 80533140 - MGP_BALBcJ_P0084739 Iqgap1 protein_coding protein_coding MGP_BALBcJ_T0084740.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80454896 80458311 - MGP_BALBcJ_P0084740 Iqgap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084741.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80469517 80472321 - Iqgap1 protein_coding retained_intron MGP_BALBcJ_T0084742.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80477870 80532987 - Iqgap1 protein_coding retained_intron MGP_BALBcJ_T0084743.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80483506 80533005 - Iqgap1 protein_coding retained_intron MGP_BALBcJ_T0084744.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80491108 80546803 - MGP_BALBcJ_P0084744 Iqgap1 protein_coding protein_coding MGP_BALBcJ_T0084745.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80496915 80556025 - MGP_BALBcJ_P0084745 Iqgap1 protein_coding protein_coding MGP_BALBcJ_T0084746.1 MGP_BALBcJ_G0032409.1 mouse_genomes_project 7 80525893 80532996 - Iqgap1 protein_coding retained_intron MGP_BALBcJ_T0002208.1 MGP_BALBcJ_G0002120.1 mouse_genomes_project 7 36153950 36155153 - TEC TEC MGP_BALBcJ_T0081293.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 989509 1035807 - MGP_BALBcJ_P0081293 Lair1 protein_coding protein_coding MGP_BALBcJ_T0081294.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 993378 1035832 - MGP_BALBcJ_P0081294 Lair1 protein_coding protein_coding MGP_BALBcJ_T0081295.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 994364 1035802 - MGP_BALBcJ_P0081295 Lair1 protein_coding protein_coding MGP_BALBcJ_T0081296.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 995285 1035789 - MGP_BALBcJ_P0081296 Lair1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081297.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 995312 1035767 - MGP_BALBcJ_P0081297 Lair1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081298.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 995472 1006813 - Lair1 protein_coding processed_transcript MGP_BALBcJ_T0081299.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 995878 1035744 - MGP_BALBcJ_P0081299 Lair1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081300.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 995968 1035769 - MGP_BALBcJ_P0081300 Lair1 protein_coding protein_coding MGP_BALBcJ_T0081301.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 995968 1035769 - MGP_BALBcJ_P0081301 Lair1 protein_coding protein_coding MGP_BALBcJ_T0081302.1 MGP_BALBcJ_G0031518.1 mouse_genomes_project 7 1006967 1035776 - Lair1 protein_coding processed_transcript MGP_BALBcJ_T0002228.1 MGP_BALBcJ_G0002140.1 mouse_genomes_project 7 54663597 54665015 + TEC TEC MGP_BALBcJ_T0018369.1 MGP_BALBcJ_G0015624.1 mouse_genomes_project 7 112987936 113060160 - 2310014F06Rik processed_transcript processed_transcript MGP_BALBcJ_T0083036.1 MGP_BALBcJ_G0032016.1 mouse_genomes_project 7 28982441 28985733 - MGP_BALBcJ_P0083036 Zbtb32 protein_coding protein_coding MGP_BALBcJ_T0083037.1 MGP_BALBcJ_G0032016.1 mouse_genomes_project 7 28982443 28991686 - MGP_BALBcJ_P0083037 Zbtb32 protein_coding protein_coding MGP_BALBcJ_T0083038.1 MGP_BALBcJ_G0032016.1 mouse_genomes_project 7 28990748 28991726 - Zbtb32 protein_coding processed_transcript MGP_BALBcJ_T0099010.1 MGP_BALBcJ_G0037053.1 mouse_genomes_project 7 78246407 78260961 - Gm44606 sense_intronic sense_intronic MGP_BALBcJ_T0010824.1 MGP_BALBcJ_G0008949.1 mouse_genomes_project 7 21296122 21296232 + Gm25196 miRNA miRNA MGP_BALBcJ_T0015730.1 MGP_BALBcJ_G0013827.1 mouse_genomes_project 7 23990314 23990666 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083183.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523478 29535602 - MGP_BALBcJ_P0083183 Hpn protein_coding protein_coding MGP_BALBcJ_T0083184.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523478 29540043 - MGP_BALBcJ_P0083184 Hpn protein_coding protein_coding MGP_BALBcJ_T0083185.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523478 29540036 - MGP_BALBcJ_P0083185 Hpn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083186.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523478 29540051 - MGP_BALBcJ_P0083186 Hpn protein_coding protein_coding MGP_BALBcJ_T0083187.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523482 29527260 - MGP_BALBcJ_P0083187 Hpn protein_coding protein_coding MGP_BALBcJ_T0083188.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523486 29524039 - MGP_BALBcJ_P0083188 Hpn protein_coding protein_coding MGP_BALBcJ_T0083189.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29523991 29525037 - Hpn protein_coding retained_intron MGP_BALBcJ_T0083190.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29526938 29527952 - Hpn protein_coding retained_intron MGP_BALBcJ_T0083191.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29527243 29528225 - Hpn protein_coding retained_intron MGP_BALBcJ_T0083192.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29533617 29536563 - MGP_BALBcJ_P0083192 Hpn protein_coding protein_coding MGP_BALBcJ_T0083193.1 MGP_BALBcJ_G0032045.1 mouse_genomes_project 7 29535170 29535614 - Hpn protein_coding retained_intron MGP_BALBcJ_T0005252.1 MGP_BALBcJ_G0004460.1 mouse_genomes_project 7 116456263 116456838 + Sox6os antisense antisense MGP_BALBcJ_T0015798.1 MGP_BALBcJ_G0013895.1 mouse_genomes_project 7 63438489 63438749 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085180.1 MGP_BALBcJ_G0032535.1 mouse_genomes_project 7 99400966 99408926 + MGP_BALBcJ_P0085180 Klhl35 protein_coding protein_coding MGP_BALBcJ_T0085181.1 MGP_BALBcJ_G0032535.1 mouse_genomes_project 7 99403869 99406690 + MGP_BALBcJ_P0085181 Klhl35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085182.1 MGP_BALBcJ_G0032535.1 mouse_genomes_project 7 99404858 99406777 + Klhl35 protein_coding retained_intron MGP_BALBcJ_T0085183.1 MGP_BALBcJ_G0032535.1 mouse_genomes_project 7 99406729 99408508 + MGP_BALBcJ_P0085183 Klhl35 protein_coding protein_coding MGP_BALBcJ_T0018302.1 MGP_BALBcJ_G0015601.1 mouse_genomes_project 7 29036166 29061040 - Gm21982 processed_transcript retained_intron MGP_BALBcJ_T0084460.1 MGP_BALBcJ_G0032361.1 mouse_genomes_project 7 73368409 73404234 + MGP_BALBcJ_P0084460 Fam174b protein_coding protein_coding MGP_BALBcJ_T0084461.1 MGP_BALBcJ_G0032361.1 mouse_genomes_project 7 73393497 73402472 + MGP_BALBcJ_P0084461 Fam174b protein_coding protein_coding MGP_BALBcJ_T0084462.1 MGP_BALBcJ_G0032361.1 mouse_genomes_project 7 73393561 73403333 + Fam174b protein_coding retained_intron MGP_BALBcJ_T0008818.1 MGP_BALBcJ_G0007122.1 mouse_genomes_project 7 34534239 34541343 + Gm26790 lincRNA lincRNA MGP_BALBcJ_T0002263.1 MGP_BALBcJ_G0002174.1 mouse_genomes_project 7 77111226 77112083 + TEC TEC MGP_BALBcJ_T0085721.1 MGP_BALBcJ_G0032747.1 mouse_genomes_project 7 105860675 105865250 - MGP_BALBcJ_P0085721 Rrp8 protein_coding protein_coding MGP_BALBcJ_T0085722.1 MGP_BALBcJ_G0032747.1 mouse_genomes_project 7 105860872 105865845 - MGP_BALBcJ_P0085722 Rrp8 protein_coding protein_coding MGP_BALBcJ_T0085723.1 MGP_BALBcJ_G0032747.1 mouse_genomes_project 7 105861108 105862150 - Rrp8 protein_coding retained_intron MGP_BALBcJ_T0085724.1 MGP_BALBcJ_G0032747.1 mouse_genomes_project 7 105861474 105862532 - Rrp8 protein_coding processed_transcript MGP_BALBcJ_T0085725.1 MGP_BALBcJ_G0032747.1 mouse_genomes_project 7 105861474 105862415 - Rrp8 protein_coding retained_intron MGP_BALBcJ_T0085726.1 MGP_BALBcJ_G0032747.1 mouse_genomes_project 7 105863160 105864842 - Rrp8 protein_coding processed_transcript MGP_BALBcJ_T0087332.1 MGP_BALBcJ_G0033127.1 mouse_genomes_project 7 139589954 139605167 - Bnip3 protein_coding processed_transcript MGP_BALBcJ_T0087333.1 MGP_BALBcJ_G0033127.1 mouse_genomes_project 7 139590053 139605065 - MGP_BALBcJ_P0087333 Bnip3 protein_coding unknown_likely_coding MGP_BALBcJ_T0087334.1 MGP_BALBcJ_G0033127.1 mouse_genomes_project 7 139590283 139593948 - Bnip3 protein_coding processed_transcript MGP_BALBcJ_T0087335.1 MGP_BALBcJ_G0033127.1 mouse_genomes_project 7 139594211 139605191 - Bnip3 protein_coding processed_transcript MGP_BALBcJ_T0087336.1 MGP_BALBcJ_G0033127.1 mouse_genomes_project 7 139594381 139605151 - Bnip3 protein_coding processed_transcript MGP_BALBcJ_T0015723.1 MGP_BALBcJ_G0013820.1 mouse_genomes_project 7 22901552 22902078 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085640.1 MGP_BALBcJ_G0032726.1 mouse_genomes_project 7 105194961 105195909 + MGP_BALBcJ_P0085640 protein_coding protein_coding MGP_BALBcJ_T0008904.1 MGP_BALBcJ_G0007188.1 mouse_genomes_project 7 73453519 73464360 + lincRNA lincRNA MGP_BALBcJ_T0085745.1 MGP_BALBcJ_G0032751.1 mouse_genomes_project 7 105881407 105915770 - MGP_BALBcJ_P0085745 Dchs1 protein_coding protein_coding MGP_BALBcJ_T0085746.1 MGP_BALBcJ_G0032751.1 mouse_genomes_project 7 105881408 105915874 - MGP_BALBcJ_P0085746 Dchs1 protein_coding protein_coding MGP_BALBcJ_T0085747.1 MGP_BALBcJ_G0032751.1 mouse_genomes_project 7 105885394 105886308 - Dchs1 protein_coding retained_intron MGP_BALBcJ_T0085748.1 MGP_BALBcJ_G0032751.1 mouse_genomes_project 7 105891866 105915772 - MGP_BALBcJ_P0085748 Dchs1 protein_coding protein_coding MGP_BALBcJ_T0081912.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16710714 16711227 - Ccdc61 protein_coding retained_intron MGP_BALBcJ_T0081913.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16710714 16730180 - MGP_BALBcJ_P0081913 Ccdc61 protein_coding protein_coding MGP_BALBcJ_T0081914.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16710715 16712378 - MGP_BALBcJ_P0081914 Ccdc61 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081915.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16710715 16730163 - MGP_BALBcJ_P0081915 Ccdc61 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081916.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16710836 16713791 - MGP_BALBcJ_P0081916 Ccdc61 protein_coding protein_coding MGP_BALBcJ_T0081917.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16711478 16712184 - Ccdc61 protein_coding retained_intron MGP_BALBcJ_T0081918.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16719388 16730163 - MGP_BALBcJ_P0081918 Ccdc61 protein_coding protein_coding MGP_BALBcJ_T0081919.1 MGP_BALBcJ_G0031728.1 mouse_genomes_project 7 16720821 16730154 - MGP_BALBcJ_P0081919 Ccdc61 protein_coding protein_coding MGP_BALBcJ_T0082098.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17667363 17670023 - MGP_BALBcJ_P0082098 Bcl3 protein_coding protein_coding MGP_BALBcJ_T0082099.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17667363 17681628 - MGP_BALBcJ_P0082099 Bcl3 protein_coding protein_coding MGP_BALBcJ_T0082100.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17670018 17670791 - Bcl3 protein_coding retained_intron MGP_BALBcJ_T0082101.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17670250 17671735 - Bcl3 protein_coding retained_intron MGP_BALBcJ_T0082102.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17670396 17674898 - Bcl3 protein_coding processed_transcript MGP_BALBcJ_T0082103.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17670487 17681015 - MGP_BALBcJ_P0082103 Bcl3 protein_coding protein_coding MGP_BALBcJ_T0082104.1 MGP_BALBcJ_G0031778.1 mouse_genomes_project 7 17671296 17681628 - Bcl3 protein_coding processed_transcript MGP_BALBcJ_T0084390.1 MGP_BALBcJ_G0032348.1 mouse_genomes_project 7 66800313 66806237 + MGP_BALBcJ_P0084390 Lysmd4 protein_coding protein_coding MGP_BALBcJ_T0084391.1 MGP_BALBcJ_G0032348.1 mouse_genomes_project 7 66800385 66806237 + MGP_BALBcJ_P0084391 Lysmd4 protein_coding protein_coding MGP_BALBcJ_T0086488.1 MGP_BALBcJ_G0032966.1 mouse_genomes_project 7 126883904 126890323 - Cd19 protein_coding retained_intron MGP_BALBcJ_T0086489.1 MGP_BALBcJ_G0032966.1 mouse_genomes_project 7 126883905 126890344 - MGP_BALBcJ_P0086489 Cd19 protein_coding protein_coding MGP_BALBcJ_T0086490.1 MGP_BALBcJ_G0032966.1 mouse_genomes_project 7 126883905 126890327 - MGP_BALBcJ_P0086490 Cd19 protein_coding protein_coding MGP_BALBcJ_T0086491.1 MGP_BALBcJ_G0032966.1 mouse_genomes_project 7 126884816 126885251 - Cd19 protein_coding retained_intron MGP_BALBcJ_T0086492.1 MGP_BALBcJ_G0032966.1 mouse_genomes_project 7 126889116 126890005 - Cd19 protein_coding retained_intron MGP_BALBcJ_T0084076.1 MGP_BALBcJ_G0032273.1 mouse_genomes_project 7 46617643 46639388 - MGP_BALBcJ_P0084076 Mrgpra6 protein_coding protein_coding MGP_BALBcJ_T0084077.1 MGP_BALBcJ_G0032273.1 mouse_genomes_project 7 46617653 46618808 - MGP_BALBcJ_P0084077 Mrgpra6 protein_coding protein_coding MGP_BALBcJ_T0087778.1 MGP_BALBcJ_G0033242.1 mouse_genomes_project 7 143255748 143271446 - MGP_BALBcJ_P0087778 protein_coding protein_coding MGP_BALBcJ_T0087779.1 MGP_BALBcJ_G0033242.1 mouse_genomes_project 7 143257424 143261646 - protein_coding processed_transcript MGP_BALBcJ_T0084835.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81925820 82035652 + MGP_BALBcJ_P0084835 Sh3gl3 protein_coding protein_coding MGP_BALBcJ_T0084836.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81926467 82021183 + Sh3gl3 protein_coding retained_intron MGP_BALBcJ_T0084837.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81926481 82059526 + MGP_BALBcJ_P0084837 Sh3gl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084838.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81926575 82059526 + MGP_BALBcJ_P0084838 Sh3gl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084839.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81926600 82059525 + MGP_BALBcJ_P0084839 Sh3gl3 protein_coding protein_coding MGP_BALBcJ_T0084840.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81926781 82035715 + MGP_BALBcJ_P0084840 Sh3gl3 protein_coding protein_coding MGP_BALBcJ_T0084841.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 81926859 81927929 + Sh3gl3 protein_coding processed_transcript MGP_BALBcJ_T0084842.1 MGP_BALBcJ_G0032432.1 mouse_genomes_project 7 82022030 82059336 + MGP_BALBcJ_P0084842 Sh3gl3 protein_coding protein_coding MGP_BALBcJ_T0087381.1 MGP_BALBcJ_G0033137.1 mouse_genomes_project 7 140589786 140618706 + MGP_BALBcJ_P0087381 Kndc1 protein_coding protein_coding MGP_BALBcJ_T0087382.1 MGP_BALBcJ_G0033137.1 mouse_genomes_project 7 140589786 140636966 + MGP_BALBcJ_P0087382 Kndc1 protein_coding protein_coding MGP_BALBcJ_T0087383.1 MGP_BALBcJ_G0033137.1 mouse_genomes_project 7 140589929 140609433 + MGP_BALBcJ_P0087383 Kndc1 protein_coding protein_coding MGP_BALBcJ_T0087384.1 MGP_BALBcJ_G0033137.1 mouse_genomes_project 7 140618481 140636966 + Kndc1 protein_coding retained_intron MGP_BALBcJ_T0084155.1 MGP_BALBcJ_G0032301.1 mouse_genomes_project 7 54435991 54815782 + Luzp2 protein_coding retained_intron MGP_BALBcJ_T0084156.1 MGP_BALBcJ_G0032301.1 mouse_genomes_project 7 54436108 54834479 + MGP_BALBcJ_P0084156 Luzp2 protein_coding protein_coding MGP_BALBcJ_T0087302.1 MGP_BALBcJ_G0033114.1 mouse_genomes_project 7 135954208 135958512 + MGP_BALBcJ_P0087302 Nps protein_coding protein_coding MGP_BALBcJ_T0086689.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375520 127381101 - MGP_BALBcJ_P0086689 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086690.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375567 127386761 - MGP_BALBcJ_P0086690 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086691.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375569 127378650 - Tmem219 protein_coding retained_intron MGP_BALBcJ_T0086692.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375569 127387590 - MGP_BALBcJ_P0086692 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086693.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375569 127387613 - MGP_BALBcJ_P0086693 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086694.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375569 127413188 - MGP_BALBcJ_P0086694 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086695.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127375571 127386213 - MGP_BALBcJ_P0086695 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086696.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127378369 127413190 - MGP_BALBcJ_P0086696 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0086697.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127380325 127387618 - Tmem219 protein_coding retained_intron MGP_BALBcJ_T0086698.1 MGP_BALBcJ_G0032995.1 mouse_genomes_project 7 127380947 127413173 - MGP_BALBcJ_P0086698 Tmem219 protein_coding protein_coding MGP_BALBcJ_T0087194.1 MGP_BALBcJ_G0033093.1 mouse_genomes_project 7 132642299 132752021 - MGP_BALBcJ_P0087194 Cpxm2 protein_coding protein_coding MGP_BALBcJ_T0087195.1 MGP_BALBcJ_G0033093.1 mouse_genomes_project 7 132654092 132659323 - Cpxm2 protein_coding retained_intron MGP_BALBcJ_T0087196.1 MGP_BALBcJ_G0033093.1 mouse_genomes_project 7 132656525 132751904 - Cpxm2 protein_coding retained_intron MGP_BALBcJ_T0087197.1 MGP_BALBcJ_G0033093.1 mouse_genomes_project 7 132706122 132742894 - Cpxm2 protein_coding processed_transcript MGP_BALBcJ_T0081585.1 MGP_BALBcJ_G0031612.1 mouse_genomes_project 7 8986737 8987658 - MGP_BALBcJ_P0081585 Vmn1r72 protein_coding protein_coding MGP_BALBcJ_T0100108.1 MGP_BALBcJ_G0038144.1 mouse_genomes_project 7 141835731 141835840 - Gm24962 snRNA snRNA MGP_BALBcJ_T0085770.1 MGP_BALBcJ_G0032767.1 mouse_genomes_project 7 107212984 107213935 - MGP_BALBcJ_P0085770 protein_coding protein_coding MGP_BALBcJ_T0084752.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80622421 80633233 - MGP_BALBcJ_P0084752 Wdr73 protein_coding protein_coding MGP_BALBcJ_T0084753.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80622422 80633196 - Wdr73 protein_coding retained_intron MGP_BALBcJ_T0084754.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80622422 80633196 - Wdr73 protein_coding retained_intron MGP_BALBcJ_T0084755.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80622963 80633198 - Wdr73 protein_coding retained_intron MGP_BALBcJ_T0084756.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80624698 80633183 - Wdr73 protein_coding processed_transcript MGP_BALBcJ_T0084757.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80624762 80633184 - MGP_BALBcJ_P0084757 Wdr73 protein_coding protein_coding MGP_BALBcJ_T0084758.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80624763 80632683 - Wdr73 protein_coding processed_transcript MGP_BALBcJ_T0084759.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80625402 80632468 - Wdr73 protein_coding processed_transcript MGP_BALBcJ_T0084760.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80629645 80633208 - Wdr73 protein_coding processed_transcript MGP_BALBcJ_T0084761.1 MGP_BALBcJ_G0032411.1 mouse_genomes_project 7 80632636 80633196 - Wdr73 protein_coding processed_transcript MGP_BALBcJ_T0015887.1 MGP_BALBcJ_G0013984.1 mouse_genomes_project 7 127204738 127205212 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102742.1 MGP_BALBcJ_G0040557.1 mouse_genomes_project 7 41617824 41617959 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087070.1 MGP_BALBcJ_G0033067.1 mouse_genomes_project 7 129046092 129069890 + MGP_BALBcJ_P0087070 Bag3 protein_coding protein_coding MGP_BALBcJ_T0087318.1 MGP_BALBcJ_G0033123.1 mouse_genomes_project 7 138134118 138164676 + MGP_BALBcJ_P0087318 protein_coding unknown_likely_coding MGP_BALBcJ_T0015684.1 MGP_BALBcJ_G0013781.1 mouse_genomes_project 7 9551713 9552368 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081466.1 MGP_BALBcJ_G0031550.1 mouse_genomes_project 7 1909687 1916474 + MGP_BALBcJ_P0081466 Zfp628 protein_coding protein_coding MGP_BALBcJ_T0085638.1 MGP_BALBcJ_G0032724.1 mouse_genomes_project 7 105175423 105176365 + MGP_BALBcJ_P0085638 Olfr678 protein_coding protein_coding MGP_BALBcJ_T0086739.1 MGP_BALBcJ_G0033005.1 mouse_genomes_project 7 127513143 127517437 - MGP_BALBcJ_P0086739 Maz protein_coding unknown_likely_coding MGP_BALBcJ_T0086740.1 MGP_BALBcJ_G0033005.1 mouse_genomes_project 7 127513152 127517470 - MGP_BALBcJ_P0086740 Maz protein_coding protein_coding MGP_BALBcJ_T0086741.1 MGP_BALBcJ_G0033005.1 mouse_genomes_project 7 127513153 127517332 - MGP_BALBcJ_P0086741 Maz protein_coding protein_coding MGP_BALBcJ_T0086742.1 MGP_BALBcJ_G0033005.1 mouse_genomes_project 7 127513908 127517590 - MGP_BALBcJ_P0086742 Maz protein_coding protein_coding MGP_BALBcJ_T0086743.1 MGP_BALBcJ_G0033005.1 mouse_genomes_project 7 127514068 127516150 - Maz protein_coding retained_intron MGP_BALBcJ_T0102777.1 MGP_BALBcJ_G0040592.1 mouse_genomes_project 7 84639465 84641835 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085962.1 MGP_BALBcJ_G0032853.1 mouse_genomes_project 7 111838787 112148465 - MGP_BALBcJ_P0085962 Galnt18 protein_coding protein_coding MGP_BALBcJ_T0085963.1 MGP_BALBcJ_G0032853.1 mouse_genomes_project 7 111838787 112148465 - MGP_BALBcJ_P0085963 Galnt18 protein_coding protein_coding MGP_BALBcJ_T0084985.1 MGP_BALBcJ_G0032491.1 mouse_genomes_project 7 90256912 90259261 + MGP_BALBcJ_P0084985 Ccdc89 protein_coding protein_coding MGP_BALBcJ_T0010910.1 MGP_BALBcJ_G0009035.1 mouse_genomes_project 7 140472619 140472726 + Mir6401 miRNA miRNA MGP_BALBcJ_T0087127.1 MGP_BALBcJ_G0033074.1 mouse_genomes_project 7 130912178 131040380 - MGP_BALBcJ_P0087127 Ate1 protein_coding unknown_likely_coding MGP_BALBcJ_T0087128.1 MGP_BALBcJ_G0033074.1 mouse_genomes_project 7 130912218 131040458 - MGP_BALBcJ_P0087128 Ate1 protein_coding protein_coding MGP_BALBcJ_T0087129.1 MGP_BALBcJ_G0033074.1 mouse_genomes_project 7 130912218 131040449 - MGP_BALBcJ_P0087129 Ate1 protein_coding protein_coding MGP_BALBcJ_T0087130.1 MGP_BALBcJ_G0033074.1 mouse_genomes_project 7 130915250 131040880 - MGP_BALBcJ_P0087130 Ate1 protein_coding protein_coding MGP_BALBcJ_T0087131.1 MGP_BALBcJ_G0033074.1 mouse_genomes_project 7 130915250 131040880 - MGP_BALBcJ_P0087131 Ate1 protein_coding protein_coding MGP_BALBcJ_T0010911.1 MGP_BALBcJ_G0009036.1 mouse_genomes_project 7 140654428 140654485 - Mir7686 miRNA miRNA MGP_BALBcJ_T0010813.1 MGP_BALBcJ_G0008938.1 mouse_genomes_project 7 325914 326005 + Gm23450 miRNA miRNA MGP_BALBcJ_T0008825.1 MGP_BALBcJ_G0007129.1 mouse_genomes_project 7 36083710 36089665 + Gm28077 lincRNA lincRNA MGP_BALBcJ_T0100055.1 MGP_BALBcJ_G0038091.1 mouse_genomes_project 7 17312001 17312140 - Gm23099 snRNA snRNA MGP_BALBcJ_T0082125.1 MGP_BALBcJ_G0031793.1 mouse_genomes_project 7 21775191 21776722 - MGP_BALBcJ_P0082125 protein_coding protein_coding MGP_BALBcJ_T0008967.1 MGP_BALBcJ_G0007225.1 mouse_genomes_project 7 114128037 114150551 + Gm29507 lincRNA lincRNA MGP_BALBcJ_T0002256.1 MGP_BALBcJ_G0002167.1 mouse_genomes_project 7 75154846 75156473 + TEC TEC MGP_BALBcJ_T0086750.1 MGP_BALBcJ_G0033007.1 mouse_genomes_project 7 127541582 127544102 - MGP_BALBcJ_P0086750 Zg16 protein_coding protein_coding MGP_BALBcJ_T0086751.1 MGP_BALBcJ_G0033007.1 mouse_genomes_project 7 127541582 127543404 - MGP_BALBcJ_P0086751 Zg16 protein_coding protein_coding MGP_BALBcJ_T0086752.1 MGP_BALBcJ_G0033007.1 mouse_genomes_project 7 127541902 127579575 - MGP_BALBcJ_P0086752 Zg16 protein_coding protein_coding MGP_BALBcJ_T0086753.1 MGP_BALBcJ_G0033007.1 mouse_genomes_project 7 127555926 127579533 - Zg16 protein_coding processed_transcript MGP_BALBcJ_T0005246.1 MGP_BALBcJ_G0004455.1 mouse_genomes_project 7 110984195 110997268 - Gm28863 antisense antisense MGP_BALBcJ_T0084101.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48467792 48524721 + Nav2 protein_coding processed_transcript MGP_BALBcJ_T0084102.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48519997 48528884 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084103.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48520021 49174473 + MGP_BALBcJ_P0084103 Nav2 protein_coding protein_coding MGP_BALBcJ_T0084104.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48810383 48974633 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084105.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48810383 49178838 + MGP_BALBcJ_P0084105 Nav2 protein_coding protein_coding MGP_BALBcJ_T0084106.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48811038 49178841 + MGP_BALBcJ_P0084106 Nav2 protein_coding protein_coding MGP_BALBcJ_T0084107.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48811039 49060196 + MGP_BALBcJ_P0084107 Nav2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084108.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48811162 49178842 + MGP_BALBcJ_P0084108 Nav2 protein_coding unknown_likely_coding MGP_BALBcJ_T0084109.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48868691 48976396 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084110.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48868805 49002693 + Nav2 protein_coding processed_transcript MGP_BALBcJ_T0084111.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48868807 48870471 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084112.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 48929531 49019555 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084113.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 49015672 49029994 + Nav2 protein_coding processed_transcript MGP_BALBcJ_T0084114.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 49115422 49124228 + MGP_BALBcJ_P0084114 Nav2 protein_coding protein_coding MGP_BALBcJ_T0084115.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 49121122 49123961 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084116.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 49142774 49144240 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084117.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 49152878 49154462 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0084118.1 MGP_BALBcJ_G0032288.1 mouse_genomes_project 7 49155047 49157684 + Nav2 protein_coding retained_intron MGP_BALBcJ_T0085539.1 MGP_BALBcJ_G0032658.1 mouse_genomes_project 7 103791239 103792193 - MGP_BALBcJ_P0085539 Olfr623 protein_coding protein_coding MGP_BALBcJ_T0005227.1 MGP_BALBcJ_G0004444.1 mouse_genomes_project 7 92589551 92596844 - 4632427E13Rik antisense antisense MGP_BALBcJ_T0005228.1 MGP_BALBcJ_G0004444.1 mouse_genomes_project 7 92593021 92596853 - 4632427E13Rik antisense antisense MGP_BALBcJ_T0005229.1 MGP_BALBcJ_G0004444.1 mouse_genomes_project 7 92593042 92596853 - 4632427E13Rik antisense antisense MGP_BALBcJ_T0005230.1 MGP_BALBcJ_G0004444.1 mouse_genomes_project 7 92596090 92596844 - 4632427E13Rik antisense antisense MGP_BALBcJ_T0100065.1 MGP_BALBcJ_G0038101.1 mouse_genomes_project 7 51672005 51672161 - Gm22211 snRNA snRNA MGP_BALBcJ_T0081489.1 MGP_BALBcJ_G0031562.1 mouse_genomes_project 7 2052883 2055074 + MGP_BALBcJ_P0081489 Zfp580 protein_coding protein_coding MGP_BALBcJ_T0008843.1 MGP_BALBcJ_G0007141.1 mouse_genomes_project 7 40405991 40409812 + Gm17102 lincRNA lincRNA MGP_BALBcJ_T0010840.1 MGP_BALBcJ_G0008965.1 mouse_genomes_project 7 28982140 28982198 + Mir3569 miRNA miRNA MGP_BALBcJ_T0082694.1 MGP_BALBcJ_G0031943.1 mouse_genomes_project 7 27062528 27065697 + MGP_BALBcJ_P0082694 Ccer2 protein_coding unknown_likely_coding MGP_BALBcJ_T0082695.1 MGP_BALBcJ_G0031943.1 mouse_genomes_project 7 27062893 27065687 + MGP_BALBcJ_P0082695 Ccer2 protein_coding protein_coding MGP_BALBcJ_T0015884.1 MGP_BALBcJ_G0013981.1 mouse_genomes_project 7 126008962 126010280 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010812.1 MGP_BALBcJ_G0008937.1 mouse_genomes_project 7 120150 120219 + Mir295 miRNA miRNA MGP_BALBcJ_T0015669.1 MGP_BALBcJ_G0013766.1 mouse_genomes_project 7 1156343 1157216 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083131.1 MGP_BALBcJ_G0032039.1 mouse_genomes_project 7 29388546 29391067 + Fam187b protein_coding retained_intron MGP_BALBcJ_T0083132.1 MGP_BALBcJ_G0032039.1 mouse_genomes_project 7 29388560 29404468 + MGP_BALBcJ_P0083132 Fam187b protein_coding protein_coding MGP_BALBcJ_T0083133.1 MGP_BALBcJ_G0032039.1 mouse_genomes_project 7 29391791 29404474 + MGP_BALBcJ_P0083133 Fam187b protein_coding protein_coding MGP_BALBcJ_T0083134.1 MGP_BALBcJ_G0032039.1 mouse_genomes_project 7 29396619 29404210 + MGP_BALBcJ_P0083134 Fam187b protein_coding protein_coding MGP_BALBcJ_T0082829.1 MGP_BALBcJ_G0031969.1 mouse_genomes_project 7 27892560 27911311 + MGP_BALBcJ_P0082829 protein_coding protein_coding MGP_BALBcJ_T0082830.1 MGP_BALBcJ_G0031969.1 mouse_genomes_project 7 27909969 27911309 + MGP_BALBcJ_P0082830 protein_coding protein_coding MGP_BALBcJ_T0081673.1 MGP_BALBcJ_G0031648.1 mouse_genomes_project 7 10567049 10568000 + MGP_BALBcJ_P0081673 Vmn1r89 protein_coding protein_coding MGP_BALBcJ_T0085540.1 MGP_BALBcJ_G0032659.1 mouse_genomes_project 7 103815383 103816931 + MGP_BALBcJ_P0085540 Olfr625-ps1 protein_coding protein_coding MGP_BALBcJ_T0085541.1 MGP_BALBcJ_G0032659.1 mouse_genomes_project 7 103815408 103816922 + MGP_BALBcJ_P0085541 Olfr625-ps1 protein_coding protein_coding MGP_BALBcJ_T0085777.1 MGP_BALBcJ_G0032774.1 mouse_genomes_project 7 107364622 107365597 + MGP_BALBcJ_P0085777 Olfr713 protein_coding protein_coding MGP_BALBcJ_T0098645.1 MGP_BALBcJ_G0036699.1 mouse_genomes_project 7 70376717 70376802 + Gm24880 rRNA rRNA MGP_BALBcJ_T0018299.1 MGP_BALBcJ_G0015598.1 mouse_genomes_project 7 25897264 25898886 - Gm44685 processed_transcript processed_transcript MGP_BALBcJ_T0085017.1 MGP_BALBcJ_G0032498.1 mouse_genomes_project 7 92499179 92524690 - MGP_BALBcJ_P0085017 Pcf11 protein_coding protein_coding MGP_BALBcJ_T0085018.1 MGP_BALBcJ_G0032498.1 mouse_genomes_project 7 92499727 92518292 - MGP_BALBcJ_P0085018 Pcf11 protein_coding protein_coding MGP_BALBcJ_T0085019.1 MGP_BALBcJ_G0032498.1 mouse_genomes_project 7 92502273 92503665 - Pcf11 protein_coding retained_intron MGP_BALBcJ_T0083650.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904225 43908296 - MGP_BALBcJ_P0083650 Nr1h2 protein_coding protein_coding MGP_BALBcJ_T0083651.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904225 43908559 - MGP_BALBcJ_P0083651 Nr1h2 protein_coding protein_coding MGP_BALBcJ_T0083652.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904226 43908558 - MGP_BALBcJ_P0083652 Nr1h2 protein_coding protein_coding MGP_BALBcJ_T0083653.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904244 43908533 - MGP_BALBcJ_P0083653 Nr1h2 protein_coding protein_coding MGP_BALBcJ_T0083654.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904261 43908533 - MGP_BALBcJ_P0083654 Nr1h2 protein_coding protein_coding MGP_BALBcJ_T0083655.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904911 43908521 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083656.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43904983 43906233 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083657.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43905666 43908561 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083658.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43905749 43906481 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083659.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43906818 43907197 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083660.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43907103 43908533 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083661.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43907202 43907822 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0083662.1 MGP_BALBcJ_G0032160.1 mouse_genomes_project 7 43907243 43908509 - Nr1h2 protein_coding retained_intron MGP_BALBcJ_T0082245.1 MGP_BALBcJ_G0031832.1 mouse_genomes_project 7 22912553 22920335 + MGP_BALBcJ_P0082245 Dmrtc2 protein_coding protein_coding MGP_BALBcJ_T0102714.1 MGP_BALBcJ_G0040529.1 mouse_genomes_project 7 15598214 15652706 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087460.1 MGP_BALBcJ_G0033175.1 mouse_genomes_project 7 141545773 141548643 + MGP_BALBcJ_P0087460 Urah protein_coding protein_coding MGP_BALBcJ_T0087461.1 MGP_BALBcJ_G0033175.1 mouse_genomes_project 7 141546034 141548722 + MGP_BALBcJ_P0087461 Urah protein_coding protein_coding MGP_BALBcJ_T0087462.1 MGP_BALBcJ_G0033175.1 mouse_genomes_project 7 141546052 141548727 + MGP_BALBcJ_P0087462 Urah protein_coding protein_coding MGP_BALBcJ_T0087463.1 MGP_BALBcJ_G0033175.1 mouse_genomes_project 7 141546089 141547824 + Urah protein_coding retained_intron MGP_BALBcJ_T0081823.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14405135 14430168 + MGP_BALBcJ_P0081823 Strn4 protein_coding protein_coding MGP_BALBcJ_T0081824.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14405563 14430164 + MGP_BALBcJ_P0081824 Strn4 protein_coding protein_coding MGP_BALBcJ_T0081825.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14405624 14418057 + MGP_BALBcJ_P0081825 Strn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081826.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14411296 14413425 + Strn4 protein_coding processed_transcript MGP_BALBcJ_T0081827.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14412314 14423218 + MGP_BALBcJ_P0081827 Strn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081828.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14413300 14417994 + Strn4 protein_coding retained_intron MGP_BALBcJ_T0081829.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14418021 14420882 + Strn4 protein_coding retained_intron MGP_BALBcJ_T0081830.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14419376 14420752 + Strn4 protein_coding processed_transcript MGP_BALBcJ_T0081831.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14420341 14427219 + MGP_BALBcJ_P0081831 Strn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081832.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14421856 14423234 + Strn4 protein_coding retained_intron MGP_BALBcJ_T0081833.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14422407 14423895 + Strn4 protein_coding retained_intron MGP_BALBcJ_T0081834.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14425482 14430168 + Strn4 protein_coding retained_intron MGP_BALBcJ_T0081835.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14426871 14429473 + MGP_BALBcJ_P0081835 Strn4 protein_coding protein_coding MGP_BALBcJ_T0081836.1 MGP_BALBcJ_G0031697.1 mouse_genomes_project 7 14427792 14429256 + Strn4 protein_coding retained_intron MGP_BALBcJ_T0010833.1 MGP_BALBcJ_G0008958.1 mouse_genomes_project 7 26851381 26851441 - Mir7049 miRNA miRNA MGP_BALBcJ_T0087506.1 MGP_BALBcJ_G0033185.1 mouse_genomes_project 7 141660586 141661863 - MGP_BALBcJ_P0087506 Ifitm5 protein_coding protein_coding MGP_BALBcJ_T0082634.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26641769 26654342 - MGP_BALBcJ_P0082634 Plekhg2 protein_coding protein_coding MGP_BALBcJ_T0082635.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26641770 26654686 - Plekhg2 protein_coding retained_intron MGP_BALBcJ_T0082636.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26641770 26645450 - Plekhg2 protein_coding retained_intron MGP_BALBcJ_T0082637.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26641770 26654603 - MGP_BALBcJ_P0082637 Plekhg2 protein_coding protein_coding MGP_BALBcJ_T0082638.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26641770 26653683 - MGP_BALBcJ_P0082638 Plekhg2 protein_coding protein_coding MGP_BALBcJ_T0082639.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26643257 26654708 - MGP_BALBcJ_P0082639 Plekhg2 protein_coding protein_coding MGP_BALBcJ_T0082640.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26646112 26647601 - Plekhg2 protein_coding retained_intron MGP_BALBcJ_T0082641.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26650518 26653836 - MGP_BALBcJ_P0082641 Plekhg2 protein_coding protein_coding MGP_BALBcJ_T0082642.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26652189 26654189 - MGP_BALBcJ_P0082642 Plekhg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082643.1 MGP_BALBcJ_G0031926.1 mouse_genomes_project 7 26652524 26653617 - MGP_BALBcJ_P0082643 Plekhg2 protein_coding protein_coding MGP_BALBcJ_T0100081.1 MGP_BALBcJ_G0038117.1 mouse_genomes_project 7 95324185 95324292 - Gm25684 snRNA snRNA MGP_BALBcJ_T0084516.1 MGP_BALBcJ_G0032371.1 mouse_genomes_project 7 78517567 78529824 - MGP_BALBcJ_P0084516 Det1 protein_coding protein_coding MGP_BALBcJ_T0084517.1 MGP_BALBcJ_G0032371.1 mouse_genomes_project 7 78525433 78538889 - MGP_BALBcJ_P0084517 Det1 protein_coding protein_coding MGP_BALBcJ_T0084518.1 MGP_BALBcJ_G0032371.1 mouse_genomes_project 7 78525435 78542899 - MGP_BALBcJ_P0084518 Det1 protein_coding protein_coding MGP_BALBcJ_T0085901.1 MGP_BALBcJ_G0032844.1 mouse_genomes_project 7 110571350 110634333 + MGP_BALBcJ_P0085901 Swap70 protein_coding protein_coding MGP_BALBcJ_T0081774.1 MGP_BALBcJ_G0031682.1 mouse_genomes_project 7 13794409 13803673 - MGP_BALBcJ_P0081774 C5ar2 protein_coding protein_coding MGP_BALBcJ_T0081775.1 MGP_BALBcJ_G0031682.1 mouse_genomes_project 7 13794409 13805639 - MGP_BALBcJ_P0081775 C5ar2 protein_coding protein_coding MGP_BALBcJ_T0087734.1 MGP_BALBcJ_G0033231.1 mouse_genomes_project 7 142935662 142936576 + MGP_BALBcJ_P0087734 protein_coding protein_coding MGP_BALBcJ_T0015845.1 MGP_BALBcJ_G0013942.1 mouse_genomes_project 7 97500497 97501207 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083968.1 MGP_BALBcJ_G0032244.1 mouse_genomes_project 7 45283972 45295421 - Syngr4 protein_coding processed_transcript MGP_BALBcJ_T0083969.1 MGP_BALBcJ_G0032244.1 mouse_genomes_project 7 45285639 45294505 - MGP_BALBcJ_P0083969 Syngr4 protein_coding protein_coding MGP_BALBcJ_T0083689.1 MGP_BALBcJ_G0032169.1 mouse_genomes_project 7 44174603 44177990 - MGP_BALBcJ_P0083689 Atf5 protein_coding protein_coding MGP_BALBcJ_T0083690.1 MGP_BALBcJ_G0032169.1 mouse_genomes_project 7 44174604 44178933 - MGP_BALBcJ_P0083690 Atf5 protein_coding protein_coding MGP_BALBcJ_T0005209.1 MGP_BALBcJ_G0004431.1 mouse_genomes_project 7 78718186 78754001 - Gm26633 antisense antisense MGP_BALBcJ_T0082919.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693900 28699520 + MGP_BALBcJ_P0082919 Alkbh6 protein_coding protein_coding MGP_BALBcJ_T0082920.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693960 28699370 + MGP_BALBcJ_P0082920 Alkbh6 protein_coding protein_coding MGP_BALBcJ_T0082921.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693960 28699377 + MGP_BALBcJ_P0082921 Alkbh6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082922.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693971 28699519 + Alkbh6 protein_coding retained_intron MGP_BALBcJ_T0082923.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693978 28697709 + Alkbh6 protein_coding retained_intron MGP_BALBcJ_T0082924.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693992 28697621 + Alkbh6 protein_coding retained_intron MGP_BALBcJ_T0082925.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28693996 28696243 + Alkbh6 protein_coding processed_transcript MGP_BALBcJ_T0082926.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28694037 28697897 + Alkbh6 protein_coding retained_intron MGP_BALBcJ_T0082927.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28694961 28697862 + Alkbh6 protein_coding retained_intron MGP_BALBcJ_T0082928.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28696333 28697564 + Alkbh6 protein_coding retained_intron MGP_BALBcJ_T0082929.1 MGP_BALBcJ_G0031996.1 mouse_genomes_project 7 28697875 28699520 + Alkbh6 protein_coding processed_transcript MGP_BALBcJ_T0101362.1 MGP_BALBcJ_G0039398.1 mouse_genomes_project 7 124980637 124980780 + Gm23168 snoRNA snoRNA MGP_BALBcJ_T0102749.1 MGP_BALBcJ_G0040564.1 mouse_genomes_project 7 43355290 43357319 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002220.1 MGP_BALBcJ_G0002132.1 mouse_genomes_project 7 43736718 43739473 + TEC TEC MGP_BALBcJ_T0082106.1 MGP_BALBcJ_G0031780.1 mouse_genomes_project 7 17713129 17722335 - MGP_BALBcJ_P0082106 Ceacam16 protein_coding protein_coding MGP_BALBcJ_T0082552.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25796812 25825469 + MGP_BALBcJ_P0082552 2310022A10Rik protein_coding protein_coding MGP_BALBcJ_T0082553.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25796846 25818085 + MGP_BALBcJ_P0082553 2310022A10Rik protein_coding protein_coding MGP_BALBcJ_T0082554.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25796849 25797651 + 2310022A10Rik protein_coding processed_transcript MGP_BALBcJ_T0082555.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25796865 25825469 + MGP_BALBcJ_P0082555 2310022A10Rik protein_coding protein_coding MGP_BALBcJ_T0082556.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25802730 25825464 + MGP_BALBcJ_P0082556 2310022A10Rik protein_coding protein_coding MGP_BALBcJ_T0082557.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25802751 25816693 + 2310022A10Rik protein_coding retained_intron MGP_BALBcJ_T0082558.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25807545 25824004 + MGP_BALBcJ_P0082558 2310022A10Rik protein_coding protein_coding MGP_BALBcJ_T0082559.1 MGP_BALBcJ_G0031901.1 mouse_genomes_project 7 25817833 25823790 + 2310022A10Rik protein_coding processed_transcript MGP_BALBcJ_T0085298.1 MGP_BALBcJ_G0032564.1 mouse_genomes_project 7 100914971 100942469 - MGP_BALBcJ_P0085298 P2ry6 protein_coding protein_coding MGP_BALBcJ_T0087935.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145265810 145343478 - MGP_BALBcJ_P0087935 Ppfia1 protein_coding protein_coding MGP_BALBcJ_T0087936.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145265811 145279296 - Ppfia1 protein_coding retained_intron MGP_BALBcJ_T0087937.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145265818 145303100 - MGP_BALBcJ_P0087937 Ppfia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087938.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145266030 145342286 - MGP_BALBcJ_P0087938 Ppfia1 protein_coding protein_coding MGP_BALBcJ_T0087939.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145272385 145276728 - Ppfia1 protein_coding processed_transcript MGP_BALBcJ_T0087940.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145288739 145290388 - Ppfia1 protein_coding retained_intron MGP_BALBcJ_T0087941.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145296039 145298802 - Ppfia1 protein_coding retained_intron MGP_BALBcJ_T0087942.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145309090 145342111 - MGP_BALBcJ_P0087942 Ppfia1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087943.1 MGP_BALBcJ_G0033271.1 mouse_genomes_project 7 145310115 145314196 - Ppfia1 protein_coding retained_intron MGP_BALBcJ_T0085330.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101338303 101405588 + MGP_BALBcJ_P0085330 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085331.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101354810 101366214 + MGP_BALBcJ_P0085331 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085332.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101355025 101366088 + MGP_BALBcJ_P0085332 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085333.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101355551 101366223 + MGP_BALBcJ_P0085333 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085334.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101366051 101406155 + MGP_BALBcJ_P0085334 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085335.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101371441 101379603 + MGP_BALBcJ_P0085335 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085336.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101375902 101378669 + Arap1 protein_coding processed_transcript MGP_BALBcJ_T0085337.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101377095 101379273 + MGP_BALBcJ_P0085337 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085338.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101378472 101379521 + MGP_BALBcJ_P0085338 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085339.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101378477 101379913 + MGP_BALBcJ_P0085339 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085340.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101387418 101406854 + MGP_BALBcJ_P0085340 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085341.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101387438 101406854 + MGP_BALBcJ_P0085341 Arap1 protein_coding protein_coding MGP_BALBcJ_T0085342.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101387705 101389182 + Arap1 protein_coding retained_intron MGP_BALBcJ_T0085343.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101388899 101391409 + Arap1 protein_coding processed_transcript MGP_BALBcJ_T0085344.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101391394 101392598 + Arap1 protein_coding processed_transcript MGP_BALBcJ_T0085345.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101394812 101402332 + Arap1 protein_coding retained_intron MGP_BALBcJ_T0085346.1 MGP_BALBcJ_G0032569.1 mouse_genomes_project 7 101400900 101405946 + Arap1 protein_coding retained_intron MGP_BALBcJ_T0015720.1 MGP_BALBcJ_G0013817.1 mouse_genomes_project 7 22325082 22325521 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085896.1 MGP_BALBcJ_G0032840.1 mouse_genomes_project 7 110365001 110401584 + MGP_BALBcJ_P0085896 Ipo7 protein_coding protein_coding MGP_BALBcJ_T0010820.1 MGP_BALBcJ_G0008945.1 mouse_genomes_project 7 15354626 15354736 + Gm25068 miRNA miRNA MGP_BALBcJ_T0085441.1 MGP_BALBcJ_G0032591.1 mouse_genomes_project 7 102164531 102267293 - MGP_BALBcJ_P0085441 Nup98 protein_coding unknown_likely_coding MGP_BALBcJ_T0085442.1 MGP_BALBcJ_G0032591.1 mouse_genomes_project 7 102178455 102267296 - MGP_BALBcJ_P0085442 Nup98 protein_coding protein_coding MGP_BALBcJ_T0084187.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55499916 55524358 - MGP_BALBcJ_P0084187 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0084188.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55499916 55524321 - MGP_BALBcJ_P0084188 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0084189.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55499916 55524127 - MGP_BALBcJ_P0084189 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0084190.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55499916 55524332 - MGP_BALBcJ_P0084190 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0084191.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55501878 55524274 - Nipa2 protein_coding processed_transcript MGP_BALBcJ_T0084192.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55502143 55506695 - Nipa2 protein_coding retained_intron MGP_BALBcJ_T0084193.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55504432 55524358 - MGP_BALBcJ_P0084193 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0084194.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55504480 55524312 - MGP_BALBcJ_P0084194 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0084195.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55510575 55524350 - Nipa2 protein_coding retained_intron MGP_BALBcJ_T0084196.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55510752 55513572 - Nipa2 protein_coding retained_intron MGP_BALBcJ_T0084197.1 MGP_BALBcJ_G0032305.1 mouse_genomes_project 7 55513234 55524055 - MGP_BALBcJ_P0084197 Nipa2 protein_coding protein_coding MGP_BALBcJ_T0085120.1 MGP_BALBcJ_G0032519.1 mouse_genomes_project 7 98045623 98103120 - MGP_BALBcJ_P0085120 Capn5 protein_coding protein_coding MGP_BALBcJ_T0085121.1 MGP_BALBcJ_G0032519.1 mouse_genomes_project 7 98047725 98085715 - MGP_BALBcJ_P0085121 Capn5 protein_coding protein_coding MGP_BALBcJ_T0085123.1 MGP_BALBcJ_G0032519.1 mouse_genomes_project 7 98068794 98085583 - Capn5 protein_coding processed_transcript MGP_BALBcJ_T0085124.1 MGP_BALBcJ_G0032519.1 mouse_genomes_project 7 98085353 98088277 - MGP_BALBcJ_P0085124 Capn5 protein_coding protein_coding MGP_BALBcJ_T0085125.1 MGP_BALBcJ_G0032519.1 mouse_genomes_project 7 98085370 98088756 - MGP_BALBcJ_P0085125 Capn5 protein_coding protein_coding MGP_BALBcJ_T0008816.1 MGP_BALBcJ_G0007120.1 mouse_genomes_project 7 33829196 33833173 + Gm45097 lincRNA lincRNA MGP_BALBcJ_T0015785.1 MGP_BALBcJ_G0013882.1 mouse_genomes_project 7 54807856 54809662 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085642.1 MGP_BALBcJ_G0032728.1 mouse_genomes_project 7 105323333 105324421 - MGP_BALBcJ_P0085642 protein_coding protein_coding MGP_BALBcJ_T0081605.1 MGP_BALBcJ_G0031626.1 mouse_genomes_project 7 9870926 9896212 + MGP_BALBcJ_P0081605 2900092C05Rik protein_coding protein_coding MGP_BALBcJ_T0102763.1 MGP_BALBcJ_G0040578.1 mouse_genomes_project 7 47449548 47597788 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005253.1 MGP_BALBcJ_G0004461.1 mouse_genomes_project 7 116777682 116778564 + Gm44777 antisense antisense MGP_BALBcJ_T0005254.1 MGP_BALBcJ_G0004461.1 mouse_genomes_project 7 116777689 116782579 + Gm44777 antisense antisense MGP_BALBcJ_T0005255.1 MGP_BALBcJ_G0004461.1 mouse_genomes_project 7 116779431 116782899 + Gm44777 antisense antisense MGP_BALBcJ_T0085773.1 MGP_BALBcJ_G0032770.1 mouse_genomes_project 7 107273629 107277871 - MGP_BALBcJ_P0085773 Olfr710 protein_coding protein_coding MGP_BALBcJ_T0085761.1 MGP_BALBcJ_G0032759.1 mouse_genomes_project 7 107069930 107070866 - MGP_BALBcJ_P0085761 Olfr698 protein_coding protein_coding MGP_BALBcJ_T0087424.1 MGP_BALBcJ_G0033149.1 mouse_genomes_project 7 140821174 140835052 + MGP_BALBcJ_P0087424 Mtg1 protein_coding protein_coding MGP_BALBcJ_T0087425.1 MGP_BALBcJ_G0033149.1 mouse_genomes_project 7 140821259 140826153 + Mtg1 protein_coding retained_intron MGP_BALBcJ_T0087426.1 MGP_BALBcJ_G0033149.1 mouse_genomes_project 7 140821273 140831739 + Mtg1 protein_coding retained_intron MGP_BALBcJ_T0087427.1 MGP_BALBcJ_G0033149.1 mouse_genomes_project 7 140821573 140822007 + Mtg1 protein_coding processed_transcript MGP_BALBcJ_T0087428.1 MGP_BALBcJ_G0033149.1 mouse_genomes_project 7 140824235 140831427 + Mtg1 protein_coding retained_intron MGP_BALBcJ_T0087429.1 MGP_BALBcJ_G0033149.1 mouse_genomes_project 7 140833224 140834713 + Mtg1 protein_coding processed_transcript MGP_BALBcJ_T0086112.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118562533 118574382 - MGP_BALBcJ_P0086112 Rps15a protein_coding protein_coding MGP_BALBcJ_T0086113.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118562539 118573450 - MGP_BALBcJ_P0086113 Rps15a protein_coding protein_coding MGP_BALBcJ_T0086114.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118567225 118573871 - MGP_BALBcJ_P0086114 Rps15a protein_coding protein_coding MGP_BALBcJ_T0086115.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118567330 118573748 - MGP_BALBcJ_P0086115 Rps15a protein_coding protein_coding MGP_BALBcJ_T0086116.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118567824 118573422 - Rps15a protein_coding retained_intron MGP_BALBcJ_T0086117.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118568159 118574323 - MGP_BALBcJ_P0086117 Rps15a protein_coding protein_coding MGP_BALBcJ_T0086118.1 MGP_BALBcJ_G0032882.1 mouse_genomes_project 7 118572978 118574322 - MGP_BALBcJ_P0086118 Rps15a protein_coding protein_coding MGP_BALBcJ_T0102790.1 MGP_BALBcJ_G0040605.1 mouse_genomes_project 7 85307258 85308165 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011665.1 MGP_BALBcJ_G0009790.1 mouse_genomes_project 7 43588140 43588428 + Gm25386 misc_RNA misc_RNA MGP_BALBcJ_T0084095.1 MGP_BALBcJ_G0032286.1 mouse_genomes_project 7 48389747 48407391 - MGP_BALBcJ_P0084095 Csrp3 protein_coding protein_coding MGP_BALBcJ_T0084096.1 MGP_BALBcJ_G0032286.1 mouse_genomes_project 7 48389747 48403011 - MGP_BALBcJ_P0084096 Csrp3 protein_coding protein_coding MGP_BALBcJ_T0018394.1 MGP_BALBcJ_G0015638.1 mouse_genomes_project 7 142097203 142103131 - B230206H07Rik processed_transcript processed_transcript MGP_BALBcJ_T0018395.1 MGP_BALBcJ_G0015638.1 mouse_genomes_project 7 142097240 142103159 - B230206H07Rik processed_transcript processed_transcript MGP_BALBcJ_T0082611.1 MGP_BALBcJ_G0031918.1 mouse_genomes_project 7 26452109 26460023 + MGP_BALBcJ_P0082611 Dyrk1b protein_coding protein_coding MGP_BALBcJ_T0082612.1 MGP_BALBcJ_G0031918.1 mouse_genomes_project 7 26452134 26459652 + MGP_BALBcJ_P0082612 Dyrk1b protein_coding protein_coding MGP_BALBcJ_T0082613.1 MGP_BALBcJ_G0031918.1 mouse_genomes_project 7 26452994 26460023 + MGP_BALBcJ_P0082613 Dyrk1b protein_coding protein_coding MGP_BALBcJ_T0082614.1 MGP_BALBcJ_G0031918.1 mouse_genomes_project 7 26453044 26459672 + MGP_BALBcJ_P0082614 Dyrk1b protein_coding protein_coding MGP_BALBcJ_T0002299.1 MGP_BALBcJ_G0002210.1 mouse_genomes_project 7 125784872 125786032 + TEC TEC MGP_BALBcJ_T0015893.1 MGP_BALBcJ_G0013990.1 mouse_genomes_project 7 127906371 127906543 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085168.1 MGP_BALBcJ_G0032529.1 mouse_genomes_project 7 98814321 99074573 - MGP_BALBcJ_P0085168 Uvrag protein_coding protein_coding MGP_BALBcJ_T0010900.1 MGP_BALBcJ_G0009025.1 mouse_genomes_project 7 127057621 127057680 - Mir7059 miRNA miRNA MGP_BALBcJ_T0015724.1 MGP_BALBcJ_G0013821.1 mouse_genomes_project 7 23481740 23482414 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087835.1 MGP_BALBcJ_G0033249.1 mouse_genomes_project 7 143722774 143725217 - MGP_BALBcJ_P0087835 Ascl2 protein_coding protein_coding MGP_BALBcJ_T0087836.1 MGP_BALBcJ_G0033249.1 mouse_genomes_project 7 143722781 143725217 - MGP_BALBcJ_P0087836 Ascl2 protein_coding protein_coding MGP_BALBcJ_T0082542.1 MGP_BALBcJ_G0031899.1 mouse_genomes_project 7 25766439 25774189 + MGP_BALBcJ_P0082542 Hipk4 protein_coding protein_coding MGP_BALBcJ_T0082543.1 MGP_BALBcJ_G0031899.1 mouse_genomes_project 7 25770231 25774184 + MGP_BALBcJ_P0082543 Hipk4 protein_coding protein_coding MGP_BALBcJ_T0081738.1 MGP_BALBcJ_G0031674.1 mouse_genomes_project 7 13506059 13526609 - MGP_BALBcJ_P0081738 Ehd2 protein_coding protein_coding MGP_BALBcJ_T0081739.1 MGP_BALBcJ_G0031674.1 mouse_genomes_project 7 13516764 13526517 - MGP_BALBcJ_P0081739 Ehd2 protein_coding protein_coding MGP_BALBcJ_T0005123.1 MGP_BALBcJ_G0004370.1 mouse_genomes_project 7 1603135 1606689 + Gm44877 antisense antisense MGP_BALBcJ_T0005237.1 MGP_BALBcJ_G0004451.1 mouse_genomes_project 7 97559054 97605460 - Rsf1os2 antisense antisense MGP_BALBcJ_T0005238.1 MGP_BALBcJ_G0004451.1 mouse_genomes_project 7 97602342 97605538 - Rsf1os2 antisense antisense MGP_BALBcJ_T0005239.1 MGP_BALBcJ_G0004451.1 mouse_genomes_project 7 97604799 97605745 - Rsf1os2 antisense antisense MGP_BALBcJ_T0084913.1 MGP_BALBcJ_G0032463.1 mouse_genomes_project 7 86226488 86227528 - MGP_BALBcJ_P0084913 Olfr303 protein_coding protein_coding MGP_BALBcJ_T0084282.1 MGP_BALBcJ_G0032326.1 mouse_genomes_project 7 63898002 63913520 + Mtmr10 protein_coding retained_intron MGP_BALBcJ_T0084283.1 MGP_BALBcJ_G0032326.1 mouse_genomes_project 7 63898019 63950904 + MGP_BALBcJ_P0084283 Mtmr10 protein_coding protein_coding MGP_BALBcJ_T0084284.1 MGP_BALBcJ_G0032326.1 mouse_genomes_project 7 63898131 63948127 + MGP_BALBcJ_P0084284 Mtmr10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084285.1 MGP_BALBcJ_G0032326.1 mouse_genomes_project 7 63910980 63931323 + MGP_BALBcJ_P0084285 Mtmr10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011671.1 MGP_BALBcJ_G0009796.1 mouse_genomes_project 7 90955550 90955756 - Gm27660 misc_RNA misc_RNA MGP_BALBcJ_T0084919.1 MGP_BALBcJ_G0032469.1 mouse_genomes_project 7 86525454 86526465 + MGP_BALBcJ_P0084919 Olfr293 protein_coding protein_coding MGP_BALBcJ_T0002217.1 MGP_BALBcJ_G0002129.1 mouse_genomes_project 7 42937790 42938243 + TEC TEC MGP_BALBcJ_T0082456.1 MGP_BALBcJ_G0031879.1 mouse_genomes_project 7 25350356 25363804 + MGP_BALBcJ_P0082456 Cyp2f2 protein_coding protein_coding MGP_BALBcJ_T0082457.1 MGP_BALBcJ_G0031879.1 mouse_genomes_project 7 25350408 25355684 + Cyp2f2 protein_coding processed_transcript MGP_BALBcJ_T0082458.1 MGP_BALBcJ_G0031879.1 mouse_genomes_project 7 25352231 25361380 + MGP_BALBcJ_P0082458 Cyp2f2 protein_coding protein_coding MGP_BALBcJ_T0011680.1 MGP_BALBcJ_G0009805.1 mouse_genomes_project 7 143341547 143341618 + Gm27483 misc_RNA misc_RNA MGP_BALBcJ_T0081587.1 MGP_BALBcJ_G0031614.1 mouse_genomes_project 7 9169426 9170341 + MGP_BALBcJ_P0081587 Vmn1r74 protein_coding protein_coding MGP_BALBcJ_T0081718.1 MGP_BALBcJ_G0031665.1 mouse_genomes_project 7 12010816 12011859 - MGP_BALBcJ_P0081718 protein_coding protein_coding MGP_BALBcJ_T0015717.1 MGP_BALBcJ_G0013814.1 mouse_genomes_project 7 17773476 17774049 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005258.1 MGP_BALBcJ_G0004464.1 mouse_genomes_project 7 121948247 122069678 - 4933432K03Rik antisense antisense MGP_BALBcJ_T0005259.1 MGP_BALBcJ_G0004464.1 mouse_genomes_project 7 122042253 122069680 - 4933432K03Rik antisense antisense MGP_BALBcJ_T0005260.1 MGP_BALBcJ_G0004464.1 mouse_genomes_project 7 122069119 122091791 - 4933432K03Rik antisense antisense MGP_BALBcJ_T0002191.1 MGP_BALBcJ_G0002103.1 mouse_genomes_project 7 14478265 14479927 - TEC TEC MGP_BALBcJ_T0083732.1 MGP_BALBcJ_G0032174.1 mouse_genomes_project 7 44226191 44233041 - MGP_BALBcJ_P0083732 Ptov1 protein_coding unknown_likely_coding MGP_BALBcJ_T0002198.1 MGP_BALBcJ_G0002110.1 mouse_genomes_project 7 32979507 32980609 - TEC TEC MGP_BALBcJ_T0083855.1 MGP_BALBcJ_G0032216.1 mouse_genomes_project 7 44849605 44866943 - MGP_BALBcJ_P0083855 Dhdh protein_coding protein_coding MGP_BALBcJ_T0083856.1 MGP_BALBcJ_G0032216.1 mouse_genomes_project 7 44853663 44857411 - Dhdh protein_coding processed_transcript MGP_BALBcJ_T0008827.1 MGP_BALBcJ_G0007131.1 mouse_genomes_project 7 36857636 36869209 - Gm45106 lincRNA lincRNA MGP_BALBcJ_T0015752.1 MGP_BALBcJ_G0013849.1 mouse_genomes_project 7 32889157 32889490 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102782.1 MGP_BALBcJ_G0040597.1 mouse_genomes_project 7 84840689 85338613 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081487.1 MGP_BALBcJ_G0031560.1 mouse_genomes_project 7 2033683 2034809 + MGP_BALBcJ_P0081487 protein_coding protein_coding MGP_BALBcJ_T0083794.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44607711 44612946 - MGP_BALBcJ_P0083794 Cd37 protein_coding protein_coding MGP_BALBcJ_T0083795.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44607715 44612921 - Cd37 protein_coding retained_intron MGP_BALBcJ_T0083796.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44607719 44613221 - MGP_BALBcJ_P0083796 Cd37 protein_coding protein_coding MGP_BALBcJ_T0083797.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44607721 44609578 - Cd37 protein_coding processed_transcript MGP_BALBcJ_T0083798.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44607969 44611166 - Cd37 protein_coding processed_transcript MGP_BALBcJ_T0083799.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44608248 44612980 - MGP_BALBcJ_P0083799 Cd37 protein_coding protein_coding MGP_BALBcJ_T0083800.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44608428 44609537 - Cd37 protein_coding processed_transcript MGP_BALBcJ_T0083801.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44608816 44613163 - MGP_BALBcJ_P0083801 Cd37 protein_coding protein_coding MGP_BALBcJ_T0083802.1 MGP_BALBcJ_G0032202.1 mouse_genomes_project 7 44611839 44612902 - Cd37 protein_coding retained_intron MGP_BALBcJ_T0082865.1 MGP_BALBcJ_G0031981.1 mouse_genomes_project 7 28429351 28432585 - Zfp82 protein_coding retained_intron MGP_BALBcJ_T0082866.1 MGP_BALBcJ_G0031981.1 mouse_genomes_project 7 28430849 28452988 - MGP_BALBcJ_P0082866 Zfp82 protein_coding protein_coding MGP_BALBcJ_T0082868.1 MGP_BALBcJ_G0031981.1 mouse_genomes_project 7 28430856 28439622 - Zfp82 protein_coding retained_intron MGP_BALBcJ_T0082869.1 MGP_BALBcJ_G0031981.1 mouse_genomes_project 7 28430858 28452230 - MGP_BALBcJ_P0082869 Zfp82 protein_coding protein_coding MGP_BALBcJ_T0082870.1 MGP_BALBcJ_G0031981.1 mouse_genomes_project 7 28432091 28452896 - MGP_BALBcJ_P0082870 Zfp82 protein_coding protein_coding MGP_BALBcJ_T0082871.1 MGP_BALBcJ_G0031981.1 mouse_genomes_project 7 28434033 28452914 - MGP_BALBcJ_P0082871 Zfp82 protein_coding protein_coding MGP_BALBcJ_T0081891.1 MGP_BALBcJ_G0031719.1 mouse_genomes_project 7 16083573 16087574 - MGP_BALBcJ_P0081891 protein_coding protein_coding MGP_BALBcJ_T0081893.1 MGP_BALBcJ_G0031719.1 mouse_genomes_project 7 16083959 16253771 - MGP_BALBcJ_P0081893 protein_coding protein_coding MGP_BALBcJ_T0081894.1 MGP_BALBcJ_G0031719.1 mouse_genomes_project 7 16086361 16253706 - MGP_BALBcJ_P0081894 protein_coding protein_coding MGP_BALBcJ_T0081895.1 MGP_BALBcJ_G0031719.1 mouse_genomes_project 7 16241115 16635919 - protein_coding processed_transcript MGP_BALBcJ_T0084138.1 MGP_BALBcJ_G0032295.1 mouse_genomes_project 7 51085978 51173759 + MGP_BALBcJ_P0084138 Ano5 protein_coding unknown_likely_coding MGP_BALBcJ_T0084139.1 MGP_BALBcJ_G0032295.1 mouse_genomes_project 7 51086723 51178622 + MGP_BALBcJ_P0084139 Ano5 protein_coding protein_coding MGP_BALBcJ_T0085785.1 MGP_BALBcJ_G0032781.1 mouse_genomes_project 7 107507597 107509073 + MGP_BALBcJ_P0085785 Rbmxl2 protein_coding protein_coding MGP_BALBcJ_T0082536.1 MGP_BALBcJ_G0031896.1 mouse_genomes_project 7 25714941 25718542 + MGP_BALBcJ_P0082536 Sertad3 protein_coding protein_coding MGP_BALBcJ_T0002304.1 MGP_BALBcJ_G0002215.1 mouse_genomes_project 7 127773857 127775909 + TEC TEC MGP_BALBcJ_T0085215.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100032167 100071992 - MGP_BALBcJ_P0085215 Pold3 protein_coding protein_coding MGP_BALBcJ_T0085216.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100033452 100071882 - MGP_BALBcJ_P0085216 Pold3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085217.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100033642 100043432 - Pold3 protein_coding retained_intron MGP_BALBcJ_T0085218.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100033721 100039807 - Pold3 protein_coding retained_intron MGP_BALBcJ_T0085219.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100046076 100050385 - Pold3 protein_coding retained_intron MGP_BALBcJ_T0085220.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100048755 100050258 - Pold3 protein_coding retained_intron MGP_BALBcJ_T0085221.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100049286 100071885 - Pold3 protein_coding processed_transcript MGP_BALBcJ_T0085222.1 MGP_BALBcJ_G0032547.1 mouse_genomes_project 7 100062689 100070333 - Pold3 protein_coding processed_transcript MGP_BALBcJ_T0015676.1 MGP_BALBcJ_G0013773.1 mouse_genomes_project 7 1588073 1588826 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015879.1 MGP_BALBcJ_G0013976.1 mouse_genomes_project 7 122985252 122985493 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081892.1 MGP_BALBcJ_G0031720.1 mouse_genomes_project 7 16083923 16371065 - MGP_BALBcJ_P0081892 protein_coding protein_coding MGP_BALBcJ_T0010863.1 MGP_BALBcJ_G0008988.1 mouse_genomes_project 7 61221541 61221621 - Mir344d-3 miRNA miRNA MGP_BALBcJ_T0102715.1 MGP_BALBcJ_G0040530.1 mouse_genomes_project 7 16046591 16054737 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081693.1 MGP_BALBcJ_G0031651.1 mouse_genomes_project 7 10665002 10713646 + MGP_BALBcJ_P0081693 Pla2g4c protein_coding protein_coding MGP_BALBcJ_T0081694.1 MGP_BALBcJ_G0031651.1 mouse_genomes_project 7 10666014 10714958 + MGP_BALBcJ_P0081694 Pla2g4c protein_coding protein_coding MGP_BALBcJ_T0081695.1 MGP_BALBcJ_G0031651.1 mouse_genomes_project 7 10674798 10676678 + Pla2g4c protein_coding processed_transcript MGP_BALBcJ_T0081696.1 MGP_BALBcJ_G0031651.1 mouse_genomes_project 7 10675911 10714962 + MGP_BALBcJ_P0081696 Pla2g4c protein_coding protein_coding MGP_BALBcJ_T0087286.1 MGP_BALBcJ_G0033110.1 mouse_genomes_project 7 134520329 134852797 - MGP_BALBcJ_P0087286 Adam12 protein_coding protein_coding MGP_BALBcJ_T0087287.1 MGP_BALBcJ_G0033110.1 mouse_genomes_project 7 134524088 134597972 - MGP_BALBcJ_P0087287 Adam12 protein_coding protein_coding MGP_BALBcJ_T0087288.1 MGP_BALBcJ_G0033110.1 mouse_genomes_project 7 134612107 134859688 - MGP_BALBcJ_P0087288 Adam12 protein_coding protein_coding MGP_BALBcJ_T0087289.1 MGP_BALBcJ_G0033110.1 mouse_genomes_project 7 134618041 134859829 - MGP_BALBcJ_P0087289 Adam12 protein_coding protein_coding MGP_BALBcJ_T0087290.1 MGP_BALBcJ_G0033110.1 mouse_genomes_project 7 134797671 134799572 - Adam12 protein_coding retained_intron MGP_BALBcJ_T0087291.1 MGP_BALBcJ_G0033110.1 mouse_genomes_project 7 134818726 134853072 - Adam12 protein_coding processed_transcript MGP_BALBcJ_T0084331.1 MGP_BALBcJ_G0032336.1 mouse_genomes_project 7 65434279 65526222 + MGP_BALBcJ_P0084331 Pcsk6 protein_coding protein_coding MGP_BALBcJ_T0084332.1 MGP_BALBcJ_G0032336.1 mouse_genomes_project 7 65434574 65623630 + MGP_BALBcJ_P0084332 Pcsk6 protein_coding protein_coding MGP_BALBcJ_T0084333.1 MGP_BALBcJ_G0032336.1 mouse_genomes_project 7 65434681 65623578 + MGP_BALBcJ_P0084333 Pcsk6 protein_coding protein_coding MGP_BALBcJ_T0084334.1 MGP_BALBcJ_G0032336.1 mouse_genomes_project 7 65434977 65623584 + MGP_BALBcJ_P0084334 Pcsk6 protein_coding protein_coding MGP_BALBcJ_T0084335.1 MGP_BALBcJ_G0032336.1 mouse_genomes_project 7 65526249 65536442 + Pcsk6 protein_coding retained_intron MGP_BALBcJ_T0084336.1 MGP_BALBcJ_G0032336.1 mouse_genomes_project 7 65611655 65616772 + Pcsk6 protein_coding retained_intron MGP_BALBcJ_T0087736.1 MGP_BALBcJ_G0033233.1 mouse_genomes_project 7 142992479 142993306 - MGP_BALBcJ_P0087736 protein_coding protein_coding MGP_BALBcJ_T0083597.1 MGP_BALBcJ_G0032153.1 mouse_genomes_project 7 43817167 43819535 + MGP_BALBcJ_P0083597 Aspdh protein_coding protein_coding MGP_BALBcJ_T0083598.1 MGP_BALBcJ_G0032153.1 mouse_genomes_project 7 43817185 43819111 + MGP_BALBcJ_P0083598 Aspdh protein_coding protein_coding MGP_BALBcJ_T0083599.1 MGP_BALBcJ_G0032153.1 mouse_genomes_project 7 43817193 43818998 + MGP_BALBcJ_P0083599 Aspdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083600.1 MGP_BALBcJ_G0032153.1 mouse_genomes_project 7 43817202 43818989 + Aspdh protein_coding retained_intron MGP_BALBcJ_T0083601.1 MGP_BALBcJ_G0032153.1 mouse_genomes_project 7 43817220 43819093 + Aspdh protein_coding processed_transcript MGP_BALBcJ_T0083602.1 MGP_BALBcJ_G0032153.1 mouse_genomes_project 7 43818245 43819472 + MGP_BALBcJ_P0083602 Aspdh protein_coding protein_coding MGP_BALBcJ_T0102802.1 MGP_BALBcJ_G0040617.1 mouse_genomes_project 7 86284178 86285084 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084582.1 MGP_BALBcJ_G0032381.1 mouse_genomes_project 7 79298584 79323842 - MGP_BALBcJ_P0084582 Rhcg protein_coding protein_coding MGP_BALBcJ_T0084583.1 MGP_BALBcJ_G0032381.1 mouse_genomes_project 7 79298590 79300151 - MGP_BALBcJ_P0084583 Rhcg protein_coding protein_coding MGP_BALBcJ_T0084584.1 MGP_BALBcJ_G0032381.1 mouse_genomes_project 7 79309906 79314012 - MGP_BALBcJ_P0084584 Rhcg protein_coding protein_coding MGP_BALBcJ_T0081488.1 MGP_BALBcJ_G0031561.1 mouse_genomes_project 7 2034001 2038011 - MGP_BALBcJ_P0081488 Zfp784 protein_coding protein_coding MGP_BALBcJ_T0087706.1 MGP_BALBcJ_G0033223.1 mouse_genomes_project 7 142495610 142525138 + MGP_BALBcJ_P0087706 Muc5ac protein_coding protein_coding MGP_BALBcJ_T0087707.1 MGP_BALBcJ_G0033223.1 mouse_genomes_project 7 142495610 142524923 + MGP_BALBcJ_P0087707 Muc5ac protein_coding protein_coding MGP_BALBcJ_T0087708.1 MGP_BALBcJ_G0033223.1 mouse_genomes_project 7 142495666 142525234 + MGP_BALBcJ_P0087708 Muc5ac protein_coding protein_coding MGP_BALBcJ_T0002215.1 MGP_BALBcJ_G0002127.1 mouse_genomes_project 7 39781609 39783149 - TEC TEC MGP_BALBcJ_T0083302.1 MGP_BALBcJ_G0032072.1 mouse_genomes_project 7 34021855 34065016 - MGP_BALBcJ_P0083302 Gpatch1 protein_coding protein_coding MGP_BALBcJ_T0083303.1 MGP_BALBcJ_G0032072.1 mouse_genomes_project 7 34021863 34064997 - MGP_BALBcJ_P0083303 Gpatch1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083304.1 MGP_BALBcJ_G0032072.1 mouse_genomes_project 7 34029737 34065016 - MGP_BALBcJ_P0083304 Gpatch1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083305.1 MGP_BALBcJ_G0032072.1 mouse_genomes_project 7 34029770 34031438 - Gpatch1 protein_coding retained_intron MGP_BALBcJ_T0083306.1 MGP_BALBcJ_G0032072.1 mouse_genomes_project 7 34053132 34064971 - Gpatch1 protein_coding retained_intron MGP_BALBcJ_T0087162.1 MGP_BALBcJ_G0033080.1 mouse_genomes_project 7 131731393 131743855 - MGP_BALBcJ_P0087162 4933402N03Rik protein_coding protein_coding MGP_BALBcJ_T0084878.1 MGP_BALBcJ_G0032443.1 mouse_genomes_project 7 83535601 83556404 - MGP_BALBcJ_P0084878 Cfap161 protein_coding protein_coding MGP_BALBcJ_T0084879.1 MGP_BALBcJ_G0032443.1 mouse_genomes_project 7 83537121 83556465 - MGP_BALBcJ_P0084879 Cfap161 protein_coding protein_coding MGP_BALBcJ_T0084880.1 MGP_BALBcJ_G0032443.1 mouse_genomes_project 7 83541855 83555756 - MGP_BALBcJ_P0084880 Cfap161 protein_coding protein_coding MGP_BALBcJ_T0010853.1 MGP_BALBcJ_G0008978.1 mouse_genomes_project 7 53500801 53500930 - Mir6238 miRNA miRNA MGP_BALBcJ_T0082796.1 MGP_BALBcJ_G0031964.1 mouse_genomes_project 7 27616692 27618574 - MGP_BALBcJ_P0082796 2200002D01Rik protein_coding protein_coding MGP_BALBcJ_T0082797.1 MGP_BALBcJ_G0031964.1 mouse_genomes_project 7 27617719 27618480 - 2200002D01Rik protein_coding retained_intron MGP_BALBcJ_T0085131.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270214 98280823 - MGP_BALBcJ_P0085131 Tsku protein_coding protein_coding MGP_BALBcJ_T0085132.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270214 98280863 - MGP_BALBcJ_P0085132 Tsku protein_coding protein_coding MGP_BALBcJ_T0085133.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270214 98280823 - MGP_BALBcJ_P0085133 Tsku protein_coding protein_coding MGP_BALBcJ_T0085134.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270214 98280827 - MGP_BALBcJ_P0085134 Tsku protein_coding protein_coding MGP_BALBcJ_T0085135.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270332 98279614 - MGP_BALBcJ_P0085135 Tsku protein_coding protein_coding MGP_BALBcJ_T0085136.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270332 98279614 - MGP_BALBcJ_P0085136 Tsku protein_coding protein_coding MGP_BALBcJ_T0085137.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98270414 98280823 - MGP_BALBcJ_P0085137 Tsku protein_coding protein_coding MGP_BALBcJ_T0085138.1 MGP_BALBcJ_G0032523.1 mouse_genomes_project 7 98273076 98279722 - Tsku protein_coding processed_transcript MGP_BALBcJ_T0087434.1 MGP_BALBcJ_G0033153.1 mouse_genomes_project 7 140887243 140888301 - MGP_BALBcJ_P0087434 Olfr524 protein_coding protein_coding MGP_BALBcJ_T0087456.1 MGP_BALBcJ_G0033173.1 mouse_genomes_project 7 141486066 141496692 - MGP_BALBcJ_P0087456 Syce1 protein_coding protein_coding MGP_BALBcJ_T0015746.1 MGP_BALBcJ_G0013843.1 mouse_genomes_project 7 32387136 32387863 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082903.1 MGP_BALBcJ_G0031992.1 mouse_genomes_project 7 28620169 28622456 - MGP_BALBcJ_P0082903 Ovol3 protein_coding protein_coding MGP_BALBcJ_T0008857.1 MGP_BALBcJ_G0007152.1 mouse_genomes_project 7 62898954 62998172 - 4930554H23Rik lincRNA lincRNA MGP_BALBcJ_T0015816.1 MGP_BALBcJ_G0013913.1 mouse_genomes_project 7 75090807 75091086 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087655.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142186777 142190777 + MGP_BALBcJ_P0087655 Rplp2 protein_coding protein_coding MGP_BALBcJ_T0087656.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142187008 142194451 + MGP_BALBcJ_P0087656 Rplp2 protein_coding unknown_likely_coding MGP_BALBcJ_T0087657.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142187038 142188024 + Rplp2 protein_coding retained_intron MGP_BALBcJ_T0087658.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142187076 142188435 + Rplp2 protein_coding retained_intron MGP_BALBcJ_T0087659.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142187119 142190542 + MGP_BALBcJ_P0087659 Rplp2 protein_coding protein_coding MGP_BALBcJ_T0087660.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142187257 142190542 + MGP_BALBcJ_P0087660 Rplp2 protein_coding protein_coding MGP_BALBcJ_T0087661.1 MGP_BALBcJ_G0033214.1 mouse_genomes_project 7 142193919 142194447 + Rplp2 protein_coding processed_transcript MGP_BALBcJ_T0081641.1 MGP_BALBcJ_G0031638.1 mouse_genomes_project 7 10348257 10349026 - Slc27a5 protein_coding processed_transcript MGP_BALBcJ_T0081642.1 MGP_BALBcJ_G0031638.1 mouse_genomes_project 7 10348257 10359548 - MGP_BALBcJ_P0081642 Slc27a5 protein_coding protein_coding MGP_BALBcJ_T0081643.1 MGP_BALBcJ_G0031638.1 mouse_genomes_project 7 10348263 10359590 - MGP_BALBcJ_P0081643 Slc27a5 protein_coding protein_coding MGP_BALBcJ_T0081644.1 MGP_BALBcJ_G0031638.1 mouse_genomes_project 7 10353210 10356831 - Slc27a5 protein_coding retained_intron MGP_BALBcJ_T0081645.1 MGP_BALBcJ_G0031638.1 mouse_genomes_project 7 10353210 10358211 - MGP_BALBcJ_P0081645 Slc27a5 protein_coding protein_coding MGP_BALBcJ_T0002248.1 MGP_BALBcJ_G0002160.1 mouse_genomes_project 7 73124838 73126085 - TEC TEC MGP_BALBcJ_T0087303.1 MGP_BALBcJ_G0033115.1 mouse_genomes_project 7 136086643 136089846 + MGP_BALBcJ_P0087303 protein_coding protein_coding MGP_BALBcJ_T0085414.1 MGP_BALBcJ_G0032584.1 mouse_genomes_project 7 102062643 102103228 - MGP_BALBcJ_P0085414 Rnf121 protein_coding protein_coding MGP_BALBcJ_T0085415.1 MGP_BALBcJ_G0032584.1 mouse_genomes_project 7 102062883 102107713 - MGP_BALBcJ_P0085415 Rnf121 protein_coding protein_coding MGP_BALBcJ_T0085416.1 MGP_BALBcJ_G0032584.1 mouse_genomes_project 7 102062944 102066983 - Rnf121 protein_coding retained_intron MGP_BALBcJ_T0085417.1 MGP_BALBcJ_G0032584.1 mouse_genomes_project 7 102071347 102107702 - MGP_BALBcJ_P0085417 Rnf121 protein_coding protein_coding MGP_BALBcJ_T0085418.1 MGP_BALBcJ_G0032584.1 mouse_genomes_project 7 102077652 102107743 - Rnf121 protein_coding processed_transcript MGP_BALBcJ_T0085419.1 MGP_BALBcJ_G0032584.1 mouse_genomes_project 7 102082362 102107629 - MGP_BALBcJ_P0085419 Rnf121 protein_coding protein_coding MGP_BALBcJ_T0101312.1 MGP_BALBcJ_G0039348.1 mouse_genomes_project 7 43596481 43596572 + Gm26247 snoRNA snoRNA MGP_BALBcJ_T0083212.1 MGP_BALBcJ_G0032051.1 mouse_genomes_project 7 29804562 29805887 + MGP_BALBcJ_P0083212 Scgb1b3 protein_coding protein_coding MGP_BALBcJ_T0085206.1 MGP_BALBcJ_G0032541.1 mouse_genomes_project 7 99709278 99710311 + MGP_BALBcJ_P0085206 Olfr521 protein_coding protein_coding MGP_BALBcJ_T0085824.1 MGP_BALBcJ_G0032814.1 mouse_genomes_project 7 108953903 108954836 + MGP_BALBcJ_P0085824 Olfr508 protein_coding protein_coding MGP_BALBcJ_T0082864.1 MGP_BALBcJ_G0031980.1 mouse_genomes_project 7 28413398 28419740 - MGP_BALBcJ_P0082864 Zfp14 protein_coding protein_coding MGP_BALBcJ_T0098651.1 MGP_BALBcJ_G0036705.1 mouse_genomes_project 7 129295646 129295764 - n-R5s158 rRNA rRNA MGP_BALBcJ_T0102798.1 MGP_BALBcJ_G0040613.1 mouse_genomes_project 7 85937991 85938888 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005112.1 MGP_BALBcJ_G0004364.1 mouse_genomes_project 7 301520 311708 - Gm44151 antisense antisense MGP_BALBcJ_T0081475.1 MGP_BALBcJ_G0031555.1 mouse_genomes_project 7 1979740 1992280 - Zfp579 protein_coding processed_transcript MGP_BALBcJ_T0081476.1 MGP_BALBcJ_G0031555.1 mouse_genomes_project 7 1989076 1992383 - Zfp579 protein_coding processed_transcript MGP_BALBcJ_T0081477.1 MGP_BALBcJ_G0031555.1 mouse_genomes_project 7 1989076 1991565 - MGP_BALBcJ_P0081477 Zfp579 protein_coding protein_coding MGP_BALBcJ_T0081478.1 MGP_BALBcJ_G0031555.1 mouse_genomes_project 7 1989078 1992326 - MGP_BALBcJ_P0081478 Zfp579 protein_coding protein_coding MGP_BALBcJ_T0081479.1 MGP_BALBcJ_G0031555.1 mouse_genomes_project 7 1990425 1992310 - MGP_BALBcJ_P0081479 Zfp579 protein_coding protein_coding MGP_BALBcJ_T0081480.1 MGP_BALBcJ_G0031555.1 mouse_genomes_project 7 1991235 1992254 - Zfp579 protein_coding processed_transcript MGP_BALBcJ_T0083473.1 MGP_BALBcJ_G0032112.1 mouse_genomes_project 7 42671788 42677697 + MGP_BALBcJ_P0083473 Lim2 protein_coding protein_coding MGP_BALBcJ_T0098390.1 MGP_BALBcJ_G0036444.1 mouse_genomes_project 7 101879617 101880230 + pseudogene pseudogene MGP_BALBcJ_T0084259.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63760665 63880125 + MGP_BALBcJ_P0084259 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084260.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63760675 63879482 + MGP_BALBcJ_P0084260 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084261.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63760675 63836562 + MGP_BALBcJ_P0084261 Trpm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084262.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63760758 63879482 + MGP_BALBcJ_P0084262 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084263.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63791998 63820646 + Trpm1 protein_coding retained_intron MGP_BALBcJ_T0084264.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792076 63807370 + Trpm1 protein_coding processed_transcript MGP_BALBcJ_T0084265.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792076 63834655 + MGP_BALBcJ_P0084265 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084266.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792167 63834583 + Trpm1 protein_coding retained_intron MGP_BALBcJ_T0084267.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792169 63880107 + MGP_BALBcJ_P0084267 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084268.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792170 63810547 + MGP_BALBcJ_P0084268 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084269.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792172 63828554 + MGP_BALBcJ_P0084269 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084270.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792201 63828554 + MGP_BALBcJ_P0084270 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084271.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63792218 63810520 + MGP_BALBcJ_P0084271 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084272.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63807348 63810663 + MGP_BALBcJ_P0084272 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084273.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63811639 63820113 + Trpm1 protein_coding processed_transcript MGP_BALBcJ_T0084274.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63811639 63817553 + MGP_BALBcJ_P0084274 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084275.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63819246 63830175 + Trpm1 protein_coding retained_intron MGP_BALBcJ_T0084276.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63820132 63833579 + MGP_BALBcJ_P0084276 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0084277.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63829693 63833042 + Trpm1 protein_coding retained_intron MGP_BALBcJ_T0084278.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63836403 63852388 + Trpm1 protein_coding retained_intron MGP_BALBcJ_T0084279.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63836770 63841111 + Trpm1 protein_coding processed_transcript MGP_BALBcJ_T0084280.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63854805 63878490 + Trpm1 protein_coding retained_intron MGP_BALBcJ_T0084281.1 MGP_BALBcJ_G0032325.1 mouse_genomes_project 7 63855018 63878370 + MGP_BALBcJ_P0084281 Trpm1 protein_coding protein_coding MGP_BALBcJ_T0018316.1 MGP_BALBcJ_G0015606.1 mouse_genomes_project 7 44740627 44742413 + Mtag2 processed_transcript processed_transcript MGP_BALBcJ_T0018317.1 MGP_BALBcJ_G0015606.1 mouse_genomes_project 7 44741697 44742413 + Mtag2 processed_transcript pseudogene MGP_BALBcJ_T0084489.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77862166 78264514 - MGP_BALBcJ_P0084489 Ntrk3 protein_coding protein_coding MGP_BALBcJ_T0084490.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77867392 77879247 - MGP_BALBcJ_P0084490 Ntrk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084491.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77878883 78263514 - MGP_BALBcJ_P0084491 Ntrk3 protein_coding protein_coding MGP_BALBcJ_T0084492.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77878910 78263520 - MGP_BALBcJ_P0084492 Ntrk3 protein_coding protein_coding MGP_BALBcJ_T0084493.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77935215 77951667 - MGP_BALBcJ_P0084493 Ntrk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084494.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77986578 78264088 - MGP_BALBcJ_P0084494 Ntrk3 protein_coding protein_coding MGP_BALBcJ_T0084495.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77988211 78064910 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084496.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 77988519 78042033 - MGP_BALBcJ_P0084496 Ntrk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084497.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78041994 78135743 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084498.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78133245 78264081 - Ntrk3 protein_coding retained_intron MGP_BALBcJ_T0084499.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78161499 78257621 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084500.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78202359 78311379 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084501.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78203093 78264509 - MGP_BALBcJ_P0084501 Ntrk3 protein_coding protein_coding MGP_BALBcJ_T0084502.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78263266 78345250 - MGP_BALBcJ_P0084502 Ntrk3 protein_coding protein_coding MGP_BALBcJ_T0084503.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78267467 78408275 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084504.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78273778 78428076 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084505.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78280849 78345635 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084506.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78416762 78428078 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0084507.1 MGP_BALBcJ_G0032368.1 mouse_genomes_project 7 78420544 78428078 - Ntrk3 protein_coding processed_transcript MGP_BALBcJ_T0085616.1 MGP_BALBcJ_G0032704.1 mouse_genomes_project 7 104591059 104592120 + MGP_BALBcJ_P0085616 Olfr652 protein_coding protein_coding MGP_BALBcJ_T0085617.1 MGP_BALBcJ_G0032704.1 mouse_genomes_project 7 104591139 104592087 + MGP_BALBcJ_P0085617 Olfr652 protein_coding protein_coding MGP_BALBcJ_T0082429.1 MGP_BALBcJ_G0031870.1 mouse_genomes_project 7 24493495 24523074 - MGP_BALBcJ_P0082429 Nlrp9c protein_coding protein_coding MGP_BALBcJ_T0082430.1 MGP_BALBcJ_G0031870.1 mouse_genomes_project 7 24496197 24523069 - MGP_BALBcJ_P0082430 Nlrp9c protein_coding protein_coding MGP_BALBcJ_T0082431.1 MGP_BALBcJ_G0031870.1 mouse_genomes_project 7 24502061 24532552 - Nlrp9c protein_coding retained_intron MGP_BALBcJ_T0082432.1 MGP_BALBcJ_G0031870.1 mouse_genomes_project 7 24502061 24532548 - Nlrp9c protein_coding processed_transcript MGP_BALBcJ_T0082433.1 MGP_BALBcJ_G0031870.1 mouse_genomes_project 7 24521097 24532552 - Nlrp9c protein_coding retained_intron MGP_BALBcJ_T0084213.1 MGP_BALBcJ_G0032309.1 mouse_genomes_project 7 56255680 56908735 - MGP_BALBcJ_P0084213 Gabrg3 protein_coding protein_coding MGP_BALBcJ_T0084214.1 MGP_BALBcJ_G0032309.1 mouse_genomes_project 7 56698384 56908418 - MGP_BALBcJ_P0084214 Gabrg3 protein_coding protein_coding MGP_BALBcJ_T0084215.1 MGP_BALBcJ_G0032309.1 mouse_genomes_project 7 56845490 56908735 - Gabrg3 protein_coding retained_intron MGP_BALBcJ_T0085767.1 MGP_BALBcJ_G0032764.1 mouse_genomes_project 7 107165199 107166159 + MGP_BALBcJ_P0085767 Olfr703 protein_coding protein_coding MGP_BALBcJ_T0011676.1 MGP_BALBcJ_G0009801.1 mouse_genomes_project 7 127537538 127537784 + Gm25333 misc_RNA misc_RNA MGP_BALBcJ_T0081492.1 MGP_BALBcJ_G0031565.1 mouse_genomes_project 7 2063424 2087215 + MGP_BALBcJ_P0081492 U2af2 protein_coding protein_coding MGP_BALBcJ_T0081493.1 MGP_BALBcJ_G0031565.1 mouse_genomes_project 7 2063567 2087208 + MGP_BALBcJ_P0081493 U2af2 protein_coding unknown_likely_coding MGP_BALBcJ_T0081494.1 MGP_BALBcJ_G0031565.1 mouse_genomes_project 7 2068365 2087208 + MGP_BALBcJ_P0081494 U2af2 protein_coding protein_coding MGP_BALBcJ_T0008859.1 MGP_BALBcJ_G0007154.1 mouse_genomes_project 7 63618886 63638712 + Gm45055 lincRNA lincRNA MGP_BALBcJ_T0008860.1 MGP_BALBcJ_G0007154.1 mouse_genomes_project 7 63625045 63638682 + Gm45055 lincRNA lincRNA MGP_BALBcJ_T0085831.1 MGP_BALBcJ_G0032821.1 mouse_genomes_project 7 109207578 109208580 - MGP_BALBcJ_P0085831 Olfr518 protein_coding protein_coding MGP_BALBcJ_T0084903.1 MGP_BALBcJ_G0032454.1 mouse_genomes_project 7 84760259 84768587 - MGP_BALBcJ_P0084903 Vmn2r66 protein_coding protein_coding MGP_BALBcJ_T0102681.1 MGP_BALBcJ_G0040496.1 mouse_genomes_project 7 9102647 9102825 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081861.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14596610 14620440 - MGP_BALBcJ_P0081861 Ppp5c protein_coding protein_coding MGP_BALBcJ_T0081862.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14597077 14599049 - Ppp5c protein_coding retained_intron MGP_BALBcJ_T0081863.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14599118 14607456 - Ppp5c protein_coding retained_intron MGP_BALBcJ_T0081864.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14599751 14620551 - Ppp5c protein_coding processed_transcript MGP_BALBcJ_T0081865.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14599760 14601147 - Ppp5c protein_coding retained_intron MGP_BALBcJ_T0081866.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14600555 14620521 - Ppp5c protein_coding processed_transcript MGP_BALBcJ_T0081867.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14600579 14602109 - Ppp5c protein_coding retained_intron MGP_BALBcJ_T0081868.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14601911 14617322 - Ppp5c protein_coding processed_transcript MGP_BALBcJ_T0081869.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14607448 14620242 - Ppp5c protein_coding processed_transcript MGP_BALBcJ_T0081870.1 MGP_BALBcJ_G0031706.1 mouse_genomes_project 7 14614952 14620416 - Ppp5c protein_coding processed_transcript MGP_BALBcJ_T0083906.1 MGP_BALBcJ_G0032227.1 mouse_genomes_project 7 45027665 45033469 + Mamstr protein_coding retained_intron MGP_BALBcJ_T0083907.1 MGP_BALBcJ_G0032227.1 mouse_genomes_project 7 45027665 45028682 + Mamstr protein_coding retained_intron MGP_BALBcJ_T0083908.1 MGP_BALBcJ_G0032227.1 mouse_genomes_project 7 45027681 45032911 + MGP_BALBcJ_P0083908 Mamstr protein_coding protein_coding MGP_BALBcJ_T0083909.1 MGP_BALBcJ_G0032227.1 mouse_genomes_project 7 45029171 45034221 + Mamstr protein_coding retained_intron MGP_BALBcJ_T0083910.1 MGP_BALBcJ_G0032227.1 mouse_genomes_project 7 45029467 45033441 + Mamstr protein_coding retained_intron MGP_BALBcJ_T0083911.1 MGP_BALBcJ_G0032227.1 mouse_genomes_project 7 45032083 45032709 + MGP_BALBcJ_P0083911 Mamstr protein_coding protein_coding MGP_BALBcJ_T0009035.1 MGP_BALBcJ_G0007268.1 mouse_genomes_project 7 136324593 136342418 - 5830432E09Rik lincRNA lincRNA MGP_BALBcJ_T0009036.1 MGP_BALBcJ_G0007268.1 mouse_genomes_project 7 136338591 136342449 - 5830432E09Rik lincRNA lincRNA MGP_BALBcJ_T0083467.1 MGP_BALBcJ_G0032109.1 mouse_genomes_project 7 42648155 42660087 + MGP_BALBcJ_P0083467 Siglecg protein_coding protein_coding MGP_BALBcJ_T0083468.1 MGP_BALBcJ_G0032109.1 mouse_genomes_project 7 42648190 42660087 + Siglecg protein_coding retained_intron MGP_BALBcJ_T0083469.1 MGP_BALBcJ_G0032109.1 mouse_genomes_project 7 42648219 42660087 + Siglecg protein_coding retained_intron MGP_BALBcJ_T0083470.1 MGP_BALBcJ_G0032109.1 mouse_genomes_project 7 42648424 42654573 + Siglecg protein_coding retained_intron MGP_BALBcJ_T0083378.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36265280 36274018 - MGP_BALBcJ_P0083378 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083379.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36273141 36565781 - MGP_BALBcJ_P0083379 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083380.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36273146 36566121 - MGP_BALBcJ_P0083380 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083381.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36273159 36567139 - MGP_BALBcJ_P0083381 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083382.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36273214 36569381 - MGP_BALBcJ_P0083382 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083383.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36364642 36566941 - MGP_BALBcJ_P0083383 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083384.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36364772 36570149 - MGP_BALBcJ_P0083384 Zfp536 protein_coding protein_coding MGP_BALBcJ_T0083385.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36505600 36570085 - Zfp536 protein_coding processed_transcript MGP_BALBcJ_T0083386.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36511844 36570070 - Zfp536 protein_coding retained_intron MGP_BALBcJ_T0083387.1 MGP_BALBcJ_G0032085.1 mouse_genomes_project 7 36568886 36570091 - Zfp536 protein_coding retained_intron MGP_BALBcJ_T0102778.1 MGP_BALBcJ_G0040593.1 mouse_genomes_project 7 84762548 85282858 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015815.1 MGP_BALBcJ_G0013912.1 mouse_genomes_project 7 75034546 75034750 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008867.1 MGP_BALBcJ_G0007160.1 mouse_genomes_project 7 65374627 65377813 + 1810008I18Rik lincRNA lincRNA MGP_BALBcJ_T0008868.1 MGP_BALBcJ_G0007160.1 mouse_genomes_project 7 65375547 65377976 + 1810008I18Rik lincRNA lincRNA MGP_BALBcJ_T0084207.1 MGP_BALBcJ_G0032308.1 mouse_genomes_project 7 55802922 56087817 + MGP_BALBcJ_P0084207 Oca2 protein_coding protein_coding MGP_BALBcJ_T0084208.1 MGP_BALBcJ_G0032308.1 mouse_genomes_project 7 55802923 55818375 + MGP_BALBcJ_P0084208 Oca2 protein_coding protein_coding MGP_BALBcJ_T0084209.1 MGP_BALBcJ_G0032308.1 mouse_genomes_project 7 55802939 56087564 + MGP_BALBcJ_P0084209 Oca2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084210.1 MGP_BALBcJ_G0032308.1 mouse_genomes_project 7 55802943 55838654 + MGP_BALBcJ_P0084210 Oca2 protein_coding protein_coding MGP_BALBcJ_T0084211.1 MGP_BALBcJ_G0032308.1 mouse_genomes_project 7 55802970 56087812 + MGP_BALBcJ_P0084211 Oca2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084212.1 MGP_BALBcJ_G0032308.1 mouse_genomes_project 7 55863667 55883964 + Oca2 protein_coding processed_transcript MGP_BALBcJ_T0005151.1 MGP_BALBcJ_G0004388.1 mouse_genomes_project 7 25486991 25495662 - Gm15567 antisense antisense MGP_BALBcJ_T0005264.1 MGP_BALBcJ_G0004467.1 mouse_genomes_project 7 122632204 122653084 - Gm15489 antisense antisense MGP_BALBcJ_T0083216.1 MGP_BALBcJ_G0032055.1 mouse_genomes_project 7 32594145 32596101 - MGP_BALBcJ_P0083216 Scgb2b27 protein_coding protein_coding MGP_BALBcJ_T0083217.1 MGP_BALBcJ_G0032055.1 mouse_genomes_project 7 32594156 32596167 - Scgb2b27 protein_coding retained_intron MGP_BALBcJ_T0083218.1 MGP_BALBcJ_G0032055.1 mouse_genomes_project 7 32594194 32596092 - MGP_BALBcJ_P0083218 Scgb2b27 protein_coding protein_coding MGP_BALBcJ_T0087586.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142066026 142071577 + Tmem80 protein_coding processed_transcript MGP_BALBcJ_T0087587.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142066175 142075447 + MGP_BALBcJ_P0087587 Tmem80 protein_coding protein_coding MGP_BALBcJ_T0087588.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142066175 142074508 + MGP_BALBcJ_P0087588 Tmem80 protein_coding protein_coding MGP_BALBcJ_T0087589.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142066417 142075102 + MGP_BALBcJ_P0087589 Tmem80 protein_coding protein_coding MGP_BALBcJ_T0087590.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142066417 142075447 + MGP_BALBcJ_P0087590 Tmem80 protein_coding protein_coding MGP_BALBcJ_T0087591.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142066447 142071618 + Tmem80 protein_coding processed_transcript MGP_BALBcJ_T0087592.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142071604 142075104 + MGP_BALBcJ_P0087592 Tmem80 protein_coding protein_coding MGP_BALBcJ_T0087593.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142071671 142074358 + MGP_BALBcJ_P0087593 Tmem80 protein_coding protein_coding MGP_BALBcJ_T0087594.1 MGP_BALBcJ_G0033207.1 mouse_genomes_project 7 142071948 142074438 + Tmem80 protein_coding retained_intron MGP_BALBcJ_T0005288.1 MGP_BALBcJ_G0004487.1 mouse_genomes_project 7 143426308 143438366 + Igf2os antisense antisense MGP_BALBcJ_T0005289.1 MGP_BALBcJ_G0004487.1 mouse_genomes_project 7 143426320 143427300 + Igf2os antisense antisense MGP_BALBcJ_T0005290.1 MGP_BALBcJ_G0004487.1 mouse_genomes_project 7 143431734 143432688 + Igf2os antisense antisense MGP_BALBcJ_T0087678.1 MGP_BALBcJ_G0033217.1 mouse_genomes_project 7 142209850 142213968 + MGP_BALBcJ_P0087678 Cd151 protein_coding protein_coding MGP_BALBcJ_T0087679.1 MGP_BALBcJ_G0033217.1 mouse_genomes_project 7 142209850 142213968 + MGP_BALBcJ_P0087679 Cd151 protein_coding protein_coding MGP_BALBcJ_T0087680.1 MGP_BALBcJ_G0033217.1 mouse_genomes_project 7 142211277 142213968 + MGP_BALBcJ_P0087680 Cd151 protein_coding protein_coding MGP_BALBcJ_T0008811.1 MGP_BALBcJ_G0007116.1 mouse_genomes_project 7 33272932 33284603 + Gm12784 lincRNA lincRNA MGP_BALBcJ_T0008812.1 MGP_BALBcJ_G0007116.1 mouse_genomes_project 7 33275672 33312859 + Gm12784 lincRNA lincRNA MGP_BALBcJ_T0087955.1 MGP_BALBcJ_G0033275.1 mouse_genomes_project 7 145651167 145655025 + MGP_BALBcJ_P0087955 Fgf4 protein_coding protein_coding MGP_BALBcJ_T0082485.1 MGP_BALBcJ_G0031886.1 mouse_genomes_project 7 25433842 25441302 + MGP_BALBcJ_P0082485 protein_coding unknown_likely_coding MGP_BALBcJ_T0082486.1 MGP_BALBcJ_G0031886.1 mouse_genomes_project 7 25439840 25441529 + MGP_BALBcJ_P0082486 protein_coding protein_coding MGP_BALBcJ_T0087360.1 MGP_BALBcJ_G0033133.1 mouse_genomes_project 7 140072720 140267304 + MGP_BALBcJ_P0087360 Inpp5a protein_coding protein_coding MGP_BALBcJ_T0087361.1 MGP_BALBcJ_G0033133.1 mouse_genomes_project 7 140072721 140267304 + MGP_BALBcJ_P0087361 Inpp5a protein_coding protein_coding MGP_BALBcJ_T0087362.1 MGP_BALBcJ_G0033133.1 mouse_genomes_project 7 140084167 140266877 + MGP_BALBcJ_P0087362 Inpp5a protein_coding protein_coding MGP_BALBcJ_T0087363.1 MGP_BALBcJ_G0033133.1 mouse_genomes_project 7 140138568 140196615 + Inpp5a protein_coding processed_transcript MGP_BALBcJ_T0087364.1 MGP_BALBcJ_G0033133.1 mouse_genomes_project 7 140165845 140183133 + Inpp5a protein_coding processed_transcript MGP_BALBcJ_T0087365.1 MGP_BALBcJ_G0033133.1 mouse_genomes_project 7 140212260 140262861 + Inpp5a protein_coding processed_transcript MGP_BALBcJ_T0082438.1 MGP_BALBcJ_G0031872.1 mouse_genomes_project 7 24664582 24718099 + MGP_BALBcJ_P0082438 Nlrp9a protein_coding protein_coding MGP_BALBcJ_T0082439.1 MGP_BALBcJ_G0031872.1 mouse_genomes_project 7 24664624 24718095 + MGP_BALBcJ_P0082439 Nlrp9a protein_coding protein_coding MGP_BALBcJ_T0082440.1 MGP_BALBcJ_G0031872.1 mouse_genomes_project 7 24664625 24703755 + MGP_BALBcJ_P0082440 Nlrp9a protein_coding protein_coding MGP_BALBcJ_T0082441.1 MGP_BALBcJ_G0031872.1 mouse_genomes_project 7 24664630 24700745 + Nlrp9a protein_coding processed_transcript MGP_BALBcJ_T0082442.1 MGP_BALBcJ_G0031872.1 mouse_genomes_project 7 24686956 24717904 + MGP_BALBcJ_P0082442 Nlrp9a protein_coding protein_coding MGP_BALBcJ_T0082443.1 MGP_BALBcJ_G0031872.1 mouse_genomes_project 7 24686956 24719567 + MGP_BALBcJ_P0082443 Nlrp9a protein_coding protein_coding MGP_BALBcJ_T0086724.1 MGP_BALBcJ_G0033003.1 mouse_genomes_project 7 127506069 127508371 - MGP_BALBcJ_P0086724 Pagr1a protein_coding protein_coding MGP_BALBcJ_T0086725.1 MGP_BALBcJ_G0033003.1 mouse_genomes_project 7 127506083 127511346 - Pagr1a protein_coding retained_intron MGP_BALBcJ_T0086729.1 MGP_BALBcJ_G0033003.1 mouse_genomes_project 7 127507249 127512116 - Pagr1a protein_coding processed_transcript MGP_BALBcJ_T0086730.1 MGP_BALBcJ_G0033003.1 mouse_genomes_project 7 127507252 127512058 - MGP_BALBcJ_P0086730 Pagr1a protein_coding protein_coding MGP_BALBcJ_T0086731.1 MGP_BALBcJ_G0033003.1 mouse_genomes_project 7 127507789 127512108 - Pagr1a protein_coding processed_transcript MGP_BALBcJ_T0008810.1 MGP_BALBcJ_G0007115.1 mouse_genomes_project 7 33171163 33255631 + Gm12766 lincRNA lincRNA MGP_BALBcJ_T0083481.1 MGP_BALBcJ_G0032116.1 mouse_genomes_project 7 42685830 42705182 + MGP_BALBcJ_P0083481 Gm45233 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083483.1 MGP_BALBcJ_G0032116.1 mouse_genomes_project 7 42685833 42705265 + MGP_BALBcJ_P0083483 Gm45233 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085481.1 MGP_BALBcJ_G0032603.1 mouse_genomes_project 7 102645684 102646763 - MGP_BALBcJ_P0085481 Olfr551 protein_coding protein_coding MGP_BALBcJ_T0083472.1 MGP_BALBcJ_G0032111.1 mouse_genomes_project 7 42669370 42677692 + MGP_BALBcJ_P0083472 Gm38999 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084956.1 MGP_BALBcJ_G0032483.1 mouse_genomes_project 7 89486198 89639864 + protein_coding retained_intron MGP_BALBcJ_T0084957.1 MGP_BALBcJ_G0032483.1 mouse_genomes_project 7 89486219 89677483 + MGP_BALBcJ_P0084957 protein_coding unknown_likely_coding MGP_BALBcJ_T0084958.1 MGP_BALBcJ_G0032483.1 mouse_genomes_project 7 89486340 89496988 + protein_coding processed_transcript MGP_BALBcJ_T0084959.1 MGP_BALBcJ_G0032483.1 mouse_genomes_project 7 89486692 89671671 + protein_coding retained_intron MGP_BALBcJ_T0084960.1 MGP_BALBcJ_G0032483.1 mouse_genomes_project 7 89574354 89648247 + protein_coding processed_transcript MGP_BALBcJ_T0084961.1 MGP_BALBcJ_G0032483.1 mouse_genomes_project 7 89651881 89675028 + MGP_BALBcJ_P0084961 protein_coding protein_coding MGP_BALBcJ_T0008783.1 MGP_BALBcJ_G0007091.1 mouse_genomes_project 7 14203823 14205349 - Gm29442 lincRNA lincRNA MGP_BALBcJ_T0083341.1 MGP_BALBcJ_G0032079.1 mouse_genomes_project 7 34333762 34340301 - MGP_BALBcJ_P0083341 Rgs9bp protein_coding protein_coding MGP_BALBcJ_T0015829.1 MGP_BALBcJ_G0013926.1 mouse_genomes_project 7 84681356 84682481 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102781.1 MGP_BALBcJ_G0040596.1 mouse_genomes_project 7 84834805 84835191 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087819.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449077 143450107 - MGP_BALBcJ_P0087819 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087820.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449077 143469844 - MGP_BALBcJ_P0087820 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087821.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449080 143450148 - MGP_BALBcJ_P0087821 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087822.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449080 143450120 - MGP_BALBcJ_P0087822 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087823.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449080 143450114 - MGP_BALBcJ_P0087823 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087824.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449082 143450139 - MGP_BALBcJ_P0087824 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087825.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449130 143450002 - MGP_BALBcJ_P0087825 Ins2 protein_coding protein_coding MGP_BALBcJ_T0087826.1 MGP_BALBcJ_G0033246.1 mouse_genomes_project 7 143449134 143449955 - MGP_BALBcJ_P0087826 Ins2 protein_coding protein_coding MGP_BALBcJ_T0085486.1 MGP_BALBcJ_G0032608.1 mouse_genomes_project 7 102732285 102733308 + MGP_BALBcJ_P0085486 Olfr556 protein_coding protein_coding MGP_BALBcJ_T0085434.1 MGP_BALBcJ_G0032587.1 mouse_genomes_project 7 102126403 102140224 + MGP_BALBcJ_P0085434 Trpc2 protein_coding protein_coding MGP_BALBcJ_T0010893.1 MGP_BALBcJ_G0009018.1 mouse_genomes_project 7 109860000 109860120 + miRNA miRNA MGP_BALBcJ_T0083293.1 MGP_BALBcJ_G0032070.1 mouse_genomes_project 7 33930321 33945095 + MGP_BALBcJ_P0083293 Slc7a10 protein_coding protein_coding MGP_BALBcJ_T0083294.1 MGP_BALBcJ_G0032070.1 mouse_genomes_project 7 33930321 33939428 + MGP_BALBcJ_P0083294 Slc7a10 protein_coding protein_coding MGP_BALBcJ_T0083295.1 MGP_BALBcJ_G0032070.1 mouse_genomes_project 7 33930357 33944891 + MGP_BALBcJ_P0083295 Slc7a10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083296.1 MGP_BALBcJ_G0032070.1 mouse_genomes_project 7 33930418 33941928 + MGP_BALBcJ_P0083296 Slc7a10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083297.1 MGP_BALBcJ_G0032070.1 mouse_genomes_project 7 33942891 33944872 + MGP_BALBcJ_P0083297 Slc7a10 protein_coding protein_coding MGP_BALBcJ_T0002268.1 MGP_BALBcJ_G0002179.1 mouse_genomes_project 7 79008571 79012466 + TEC TEC MGP_BALBcJ_T0081607.1 MGP_BALBcJ_G0031628.1 mouse_genomes_project 7 9918103 9940132 - MGP_BALBcJ_P0081607 protein_coding protein_coding MGP_BALBcJ_T0015830.1 MGP_BALBcJ_G0013927.1 mouse_genomes_project 7 84998450 84999096 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005612.1 MGP_BALBcJ_G0004727.1 mouse_genomes_project 7 65433551 65434538 - Gm20684 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0085873.1 MGP_BALBcJ_G0032835.1 mouse_genomes_project 7 110080179 110096528 - MGP_BALBcJ_P0085873 Tmem9b protein_coding protein_coding MGP_BALBcJ_T0085874.1 MGP_BALBcJ_G0032835.1 mouse_genomes_project 7 110089703 110096596 - MGP_BALBcJ_P0085874 Tmem9b protein_coding protein_coding MGP_BALBcJ_T0085530.1 MGP_BALBcJ_G0032649.1 mouse_genomes_project 7 103627242 103628202 - MGP_BALBcJ_P0085530 Olfr609 protein_coding protein_coding MGP_BALBcJ_T0086351.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 122786086 123131346 + MGP_BALBcJ_P0086351 Prkcb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086352.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 122786632 123125608 + MGP_BALBcJ_P0086352 Prkcb protein_coding protein_coding MGP_BALBcJ_T0086353.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 122786644 123131349 + MGP_BALBcJ_P0086353 Prkcb protein_coding protein_coding MGP_BALBcJ_T0086354.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 122787363 122925798 + Prkcb protein_coding processed_transcript MGP_BALBcJ_T0086355.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 122916828 122958005 + Prkcb protein_coding processed_transcript MGP_BALBcJ_T0086356.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 123090447 123093229 + Prkcb protein_coding retained_intron MGP_BALBcJ_T0086357.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 123096482 123125031 + Prkcb protein_coding processed_transcript MGP_BALBcJ_T0086358.1 MGP_BALBcJ_G0032944.1 mouse_genomes_project 7 123130396 123131349 + Prkcb protein_coding retained_intron MGP_BALBcJ_T0081502.1 MGP_BALBcJ_G0031567.1 mouse_genomes_project 7 2124234 2131159 - MGP_BALBcJ_P0081502 Rfpl4 protein_coding protein_coding MGP_BALBcJ_T0081503.1 MGP_BALBcJ_G0031567.1 mouse_genomes_project 7 2124234 2131159 - MGP_BALBcJ_P0081503 Rfpl4 protein_coding protein_coding MGP_BALBcJ_T0100047.1 MGP_BALBcJ_G0038083.1 mouse_genomes_project 7 2312151 2312258 - Gm23942 snRNA snRNA MGP_BALBcJ_T0086216.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120255597 120310927 + MGP_BALBcJ_P0086216 2610020H08Rik protein_coding protein_coding MGP_BALBcJ_T0086217.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120255601 120310927 + MGP_BALBcJ_P0086217 2610020H08Rik protein_coding protein_coding MGP_BALBcJ_T0086218.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120255742 120281669 + 2610020H08Rik protein_coding retained_intron MGP_BALBcJ_T0086219.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120255971 120310797 + MGP_BALBcJ_P0086219 2610020H08Rik protein_coding protein_coding MGP_BALBcJ_T0086220.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120284917 120293596 + 2610020H08Rik protein_coding processed_transcript MGP_BALBcJ_T0086221.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120286368 120288828 + 2610020H08Rik protein_coding retained_intron MGP_BALBcJ_T0086222.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120294949 120306023 + 2610020H08Rik protein_coding processed_transcript MGP_BALBcJ_T0086223.1 MGP_BALBcJ_G0032907.1 mouse_genomes_project 7 120306189 120307420 + 2610020H08Rik protein_coding retained_intron MGP_BALBcJ_T0081210.1 MGP_BALBcJ_G0031503.1 mouse_genomes_project 7 402532 421108 - MGP_BALBcJ_P0081210 Tarm1 protein_coding protein_coding MGP_BALBcJ_T0081211.1 MGP_BALBcJ_G0031503.1 mouse_genomes_project 7 405466 421174 - MGP_BALBcJ_P0081211 Tarm1 protein_coding protein_coding MGP_BALBcJ_T0081212.1 MGP_BALBcJ_G0031503.1 mouse_genomes_project 7 406660 421068 - MGP_BALBcJ_P0081212 Tarm1 protein_coding protein_coding MGP_BALBcJ_T0083060.1 MGP_BALBcJ_G0032026.1 mouse_genomes_project 7 29115936 29119098 - MGP_BALBcJ_P0083060 Gapdhs protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083061.1 MGP_BALBcJ_G0032026.1 mouse_genomes_project 7 29115941 29133959 - MGP_BALBcJ_P0083061 Gapdhs protein_coding protein_coding MGP_BALBcJ_T0082337.1 MGP_BALBcJ_G0031848.1 mouse_genomes_project 7 23366024 23368699 + Tmem145 protein_coding retained_intron MGP_BALBcJ_T0082338.1 MGP_BALBcJ_G0031848.1 mouse_genomes_project 7 23366026 23376066 + MGP_BALBcJ_P0082338 Tmem145 protein_coding protein_coding MGP_BALBcJ_T0082339.1 MGP_BALBcJ_G0031848.1 mouse_genomes_project 7 23366026 23376079 + MGP_BALBcJ_P0082339 Tmem145 protein_coding protein_coding MGP_BALBcJ_T0082340.1 MGP_BALBcJ_G0031848.1 mouse_genomes_project 7 23374923 23376076 + Tmem145 protein_coding retained_intron MGP_BALBcJ_T0101980.1 MGP_BALBcJ_G0039828.1 mouse_genomes_project 7 104479871 104482326 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101981.1 MGP_BALBcJ_G0039828.1 mouse_genomes_project 7 104480564 104481805 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101341.1 MGP_BALBcJ_G0039377.1 mouse_genomes_project 7 97430321 97430430 + Gm24412 snoRNA snoRNA MGP_BALBcJ_T0085949.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111431108 111431891 - Eif4g2 protein_coding processed_transcript MGP_BALBcJ_T0085950.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111431331 111433001 - Eif4g2 protein_coding retained_intron MGP_BALBcJ_T0085951.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111431431 111441057 - MGP_BALBcJ_P0085951 Eif4g2 protein_coding protein_coding MGP_BALBcJ_T0085952.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111432139 111432989 - MGP_BALBcJ_P0085952 Eif4g2 protein_coding protein_coding MGP_BALBcJ_T0085953.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111432877 111433439 - Eif4g2 protein_coding retained_intron MGP_BALBcJ_T0085954.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111433612 111434125 - Eif4g2 protein_coding retained_intron MGP_BALBcJ_T0085955.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111433951 111434949 - Eif4g2 protein_coding processed_transcript MGP_BALBcJ_T0085956.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111435262 111436491 - Eif4g2 protein_coding retained_intron MGP_BALBcJ_T0085957.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111436689 111438104 - Eif4g2 protein_coding retained_intron MGP_BALBcJ_T0085958.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111437161 111441757 - MGP_BALBcJ_P0085958 Eif4g2 protein_coding protein_coding MGP_BALBcJ_T0085959.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111438077 111440933 - MGP_BALBcJ_P0085959 Eif4g2 protein_coding protein_coding MGP_BALBcJ_T0085960.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111439156 111441565 - Eif4g2 protein_coding retained_intron MGP_BALBcJ_T0085961.1 MGP_BALBcJ_G0032852.1 mouse_genomes_project 7 111439654 111440591 - MGP_BALBcJ_P0085961 Eif4g2 protein_coding protein_coding MGP_BALBcJ_T0084810.1 MGP_BALBcJ_G0032424.1 mouse_genomes_project 7 81350172 81460585 - MGP_BALBcJ_P0084810 Homer2 protein_coding protein_coding MGP_BALBcJ_T0084811.1 MGP_BALBcJ_G0032424.1 mouse_genomes_project 7 81350172 81446524 - MGP_BALBcJ_P0084811 Homer2 protein_coding protein_coding MGP_BALBcJ_T0084812.1 MGP_BALBcJ_G0032424.1 mouse_genomes_project 7 81359976 81460423 - MGP_BALBcJ_P0084812 Homer2 protein_coding unknown_likely_coding MGP_BALBcJ_T0083221.1 MGP_BALBcJ_G0032057.1 mouse_genomes_project 7 32806018 32810425 + MGP_BALBcJ_P0083221 Scgb1b30 protein_coding protein_coding MGP_BALBcJ_T0083959.1 MGP_BALBcJ_G0032241.1 mouse_genomes_project 7 45223593 45229150 - MGP_BALBcJ_P0083959 Grwd1 protein_coding protein_coding MGP_BALBcJ_T0083960.1 MGP_BALBcJ_G0032241.1 mouse_genomes_project 7 45223596 45229137 - MGP_BALBcJ_P0083960 Grwd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083961.1 MGP_BALBcJ_G0032241.1 mouse_genomes_project 7 45223598 45229305 - MGP_BALBcJ_P0083961 Grwd1 protein_coding protein_coding MGP_BALBcJ_T0083962.1 MGP_BALBcJ_G0032241.1 mouse_genomes_project 7 45224429 45229242 - MGP_BALBcJ_P0083962 Grwd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005140.1 MGP_BALBcJ_G0004380.1 mouse_genomes_project 7 17782237 17789317 + Gm16251 antisense antisense MGP_BALBcJ_T0083937.1 MGP_BALBcJ_G0032236.1 mouse_genomes_project 7 45117399 45118106 - MGP_BALBcJ_P0083937 Spaca4 protein_coding protein_coding MGP_BALBcJ_T0002235.1 MGP_BALBcJ_G0002147.1 mouse_genomes_project 7 63378621 63378980 + TEC TEC MGP_BALBcJ_T0087208.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133315527 133390493 - MGP_BALBcJ_P0087208 Fam53b protein_coding protein_coding MGP_BALBcJ_T0087209.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133360848 133415892 - MGP_BALBcJ_P0087209 Fam53b protein_coding protein_coding MGP_BALBcJ_T0087210.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133360848 133388489 - MGP_BALBcJ_P0087210 Fam53b protein_coding protein_coding MGP_BALBcJ_T0087211.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133361683 133416526 - MGP_BALBcJ_P0087211 Fam53b protein_coding protein_coding MGP_BALBcJ_T0087212.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133380684 133409053 - MGP_BALBcJ_P0087212 Fam53b protein_coding protein_coding MGP_BALBcJ_T0087213.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133380795 133381872 - Fam53b protein_coding processed_transcript MGP_BALBcJ_T0087214.1 MGP_BALBcJ_G0033098.1 mouse_genomes_project 7 133380854 133404423 - Fam53b protein_coding processed_transcript MGP_BALBcJ_T0085210.1 MGP_BALBcJ_G0032545.1 mouse_genomes_project 7 99865473 99932307 - MGP_BALBcJ_P0085210 Rnf169 protein_coding protein_coding MGP_BALBcJ_T0085211.1 MGP_BALBcJ_G0032545.1 mouse_genomes_project 7 99880475 99913871 - Rnf169 protein_coding processed_transcript MGP_BALBcJ_T0082310.1 MGP_BALBcJ_G0031843.1 mouse_genomes_project 7 23282306 23291900 - MGP_BALBcJ_P0082310 Gsk3a protein_coding protein_coding MGP_BALBcJ_T0082311.1 MGP_BALBcJ_G0031843.1 mouse_genomes_project 7 23282306 23291900 - MGP_BALBcJ_P0082311 Gsk3a protein_coding protein_coding MGP_BALBcJ_T0082312.1 MGP_BALBcJ_G0031843.1 mouse_genomes_project 7 23283513 23285293 - Gsk3a protein_coding retained_intron MGP_BALBcJ_T0083408.1 MGP_BALBcJ_G0032090.1 mouse_genomes_project 7 37067606 37077035 - MGP_BALBcJ_P0083408 Pop4 protein_coding protein_coding MGP_BALBcJ_T0083409.1 MGP_BALBcJ_G0032090.1 mouse_genomes_project 7 37069956 37076939 - MGP_BALBcJ_P0083409 Pop4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083410.1 MGP_BALBcJ_G0032090.1 mouse_genomes_project 7 37070026 37076981 - MGP_BALBcJ_P0083410 Pop4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083411.1 MGP_BALBcJ_G0032090.1 mouse_genomes_project 7 37071507 37076961 - Pop4 protein_coding retained_intron MGP_BALBcJ_T0083412.1 MGP_BALBcJ_G0032090.1 mouse_genomes_project 7 37071712 37076985 - MGP_BALBcJ_P0083412 Pop4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083413.1 MGP_BALBcJ_G0032090.1 mouse_genomes_project 7 37073992 37076892 - Pop4 protein_coding retained_intron MGP_BALBcJ_T0081758.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13734893 13738627 + MGP_BALBcJ_P0081758 Meis3 protein_coding protein_coding MGP_BALBcJ_T0081759.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13734942 13738625 + MGP_BALBcJ_P0081759 Meis3 protein_coding protein_coding MGP_BALBcJ_T0081760.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13735078 13746116 + MGP_BALBcJ_P0081760 Meis3 protein_coding protein_coding MGP_BALBcJ_T0081761.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13735191 13746113 + Meis3 protein_coding retained_intron MGP_BALBcJ_T0081762.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13735233 13746116 + MGP_BALBcJ_P0081762 Meis3 protein_coding protein_coding MGP_BALBcJ_T0081763.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13735233 13746116 + MGP_BALBcJ_P0081763 Meis3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081764.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13737532 13738268 + Meis3 protein_coding retained_intron MGP_BALBcJ_T0081765.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13738874 13745127 + MGP_BALBcJ_P0081765 Meis3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081766.1 MGP_BALBcJ_G0031680.1 mouse_genomes_project 7 13743585 13746116 + Meis3 protein_coding retained_intron MGP_BALBcJ_T0081188.1 MGP_BALBcJ_G0031496.1 mouse_genomes_project 7 45683 62734 - AU018091 protein_coding processed_transcript MGP_BALBcJ_T0081189.1 MGP_BALBcJ_G0031496.1 mouse_genomes_project 7 45683 69002 - MGP_BALBcJ_P0081189 AU018091 protein_coding protein_coding MGP_BALBcJ_T0081190.1 MGP_BALBcJ_G0031496.1 mouse_genomes_project 7 53312 68907 - MGP_BALBcJ_P0081190 AU018091 protein_coding protein_coding MGP_BALBcJ_T0087551.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141947202 141949328 + Rassf7 protein_coding processed_transcript MGP_BALBcJ_T0087552.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141947226 141948841 + Rassf7 protein_coding processed_transcript MGP_BALBcJ_T0087553.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141947305 141948806 + MGP_BALBcJ_P0087553 Rassf7 protein_coding protein_coding MGP_BALBcJ_T0087554.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141947449 141949629 + MGP_BALBcJ_P0087554 Rassf7 protein_coding unknown_likely_coding MGP_BALBcJ_T0087555.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141947530 141948800 + MGP_BALBcJ_P0087555 Rassf7 protein_coding protein_coding MGP_BALBcJ_T0087556.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141947962 141948933 + MGP_BALBcJ_P0087556 Rassf7 protein_coding protein_coding MGP_BALBcJ_T0087557.1 MGP_BALBcJ_G0033200.1 mouse_genomes_project 7 141948027 141949041 + MGP_BALBcJ_P0087557 Rassf7 protein_coding protein_coding MGP_BALBcJ_T0015891.1 MGP_BALBcJ_G0013988.1 mouse_genomes_project 7 127648375 127649313 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083970.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45295674 45316368 + MGP_BALBcJ_P0083970 Tmem143 protein_coding protein_coding MGP_BALBcJ_T0083971.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45295814 45316368 + MGP_BALBcJ_P0083971 Tmem143 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083972.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45295834 45316364 + MGP_BALBcJ_P0083972 Tmem143 protein_coding protein_coding MGP_BALBcJ_T0083973.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45296153 45300883 + Tmem143 protein_coding retained_intron MGP_BALBcJ_T0083974.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45296156 45307180 + Tmem143 protein_coding processed_transcript MGP_BALBcJ_T0083975.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45296162 45306427 + Tmem143 protein_coding retained_intron MGP_BALBcJ_T0083976.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45296162 45308487 + MGP_BALBcJ_P0083976 Tmem143 protein_coding protein_coding MGP_BALBcJ_T0083977.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45307824 45308429 + Tmem143 protein_coding processed_transcript MGP_BALBcJ_T0083978.1 MGP_BALBcJ_G0032245.1 mouse_genomes_project 7 45314955 45315930 + Tmem143 protein_coding processed_transcript MGP_BALBcJ_T0082108.1 MGP_BALBcJ_G0031782.1 mouse_genomes_project 7 17768039 17782669 - MGP_BALBcJ_P0082108 Pvr protein_coding protein_coding MGP_BALBcJ_T0082109.1 MGP_BALBcJ_G0031782.1 mouse_genomes_project 7 17769527 17772516 - Pvr protein_coding retained_intron MGP_BALBcJ_T0082110.1 MGP_BALBcJ_G0031782.1 mouse_genomes_project 7 17777090 17782622 - Pvr protein_coding retained_intron MGP_BALBcJ_T0082111.1 MGP_BALBcJ_G0031782.1 mouse_genomes_project 7 17778785 17782622 - Pvr protein_coding retained_intron MGP_BALBcJ_T0084723.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80174037 80184312 - MGP_BALBcJ_P0084723 Blm protein_coding protein_coding MGP_BALBcJ_T0084724.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80174532 80255321 - MGP_BALBcJ_P0084724 Blm protein_coding protein_coding MGP_BALBcJ_T0084725.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80174631 80255200 - MGP_BALBcJ_P0084725 Blm protein_coding protein_coding MGP_BALBcJ_T0084726.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80174777 80176909 - Blm protein_coding processed_transcript MGP_BALBcJ_T0084727.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80174932 80178790 - Blm protein_coding retained_intron MGP_BALBcJ_T0084728.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80174960 80180361 - MGP_BALBcJ_P0084728 Blm protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084729.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80184287 80187000 - MGP_BALBcJ_P0084729 Blm protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084730.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80188761 80234852 - Blm protein_coding retained_intron MGP_BALBcJ_T0084731.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80188787 80191294 - Blm protein_coding retained_intron MGP_BALBcJ_T0084732.1 MGP_BALBcJ_G0032407.1 mouse_genomes_project 7 80194172 80202120 - Blm protein_coding retained_intron MGP_BALBcJ_T0010907.1 MGP_BALBcJ_G0009032.1 mouse_genomes_project 7 131460082 131460150 + Mir7061 miRNA miRNA MGP_BALBcJ_T0082616.1 MGP_BALBcJ_G0031920.1 mouse_genomes_project 7 26557765 26560189 + MGP_BALBcJ_P0082616 Eid2b protein_coding protein_coding MGP_BALBcJ_T0081727.1 MGP_BALBcJ_G0031669.1 mouse_genomes_project 7 13379281 13387081 - MGP_BALBcJ_P0081727 Obox6 protein_coding protein_coding MGP_BALBcJ_T0084486.1 MGP_BALBcJ_G0032367.1 mouse_genomes_project 7 75925582 76824720 + MGP_BALBcJ_P0084486 Agbl1 protein_coding protein_coding MGP_BALBcJ_T0084487.1 MGP_BALBcJ_G0032367.1 mouse_genomes_project 7 76104539 76396474 + MGP_BALBcJ_P0084487 Agbl1 protein_coding protein_coding MGP_BALBcJ_T0084488.1 MGP_BALBcJ_G0032367.1 mouse_genomes_project 7 76104539 76459680 + MGP_BALBcJ_P0084488 Agbl1 protein_coding protein_coding MGP_BALBcJ_T0084992.1 MGP_BALBcJ_G0032493.1 mouse_genomes_project 7 90283152 90289967 - MGP_BALBcJ_P0084992 Tmem126a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084993.1 MGP_BALBcJ_G0032493.1 mouse_genomes_project 7 90283157 90289988 - MGP_BALBcJ_P0084993 Tmem126a protein_coding protein_coding MGP_BALBcJ_T0084994.1 MGP_BALBcJ_G0032493.1 mouse_genomes_project 7 90287963 90289967 - Tmem126a protein_coding retained_intron MGP_BALBcJ_T0008891.1 MGP_BALBcJ_G0007178.1 mouse_genomes_project 7 72717629 72721948 - Gm6567 lincRNA lincRNA MGP_BALBcJ_T0008824.1 MGP_BALBcJ_G0007128.1 mouse_genomes_project 7 35928743 35929899 + Gm28075 lincRNA lincRNA MGP_BALBcJ_T0008780.1 MGP_BALBcJ_G0007089.1 mouse_genomes_project 7 10307728 10321172 - 1810019N24Rik lincRNA lincRNA MGP_BALBcJ_T0008781.1 MGP_BALBcJ_G0007089.1 mouse_genomes_project 7 10308826 10309203 - 1810019N24Rik lincRNA lincRNA MGP_BALBcJ_T0081943.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16917171 16920433 + MGP_BALBcJ_P0081943 Dmpk protein_coding protein_coding MGP_BALBcJ_T0081944.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16917173 16927191 + MGP_BALBcJ_P0081944 Dmpk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081945.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16917244 16927191 + MGP_BALBcJ_P0081945 Dmpk protein_coding protein_coding MGP_BALBcJ_T0081946.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16917298 16927192 + MGP_BALBcJ_P0081946 Dmpk protein_coding protein_coding MGP_BALBcJ_T0081947.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16918013 16921173 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081948.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16919803 16927189 + Dmpk protein_coding retained_intron MGP_BALBcJ_T0081949.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16919803 16927189 + Dmpk protein_coding retained_intron MGP_BALBcJ_T0081950.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16919803 16927189 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081951.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16920740 16922604 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081952.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16920964 16922103 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081953.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16921082 16925130 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081954.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16921217 16922830 + Dmpk protein_coding retained_intron MGP_BALBcJ_T0081955.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16921656 16926407 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081956.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16924845 16925724 + Dmpk protein_coding retained_intron MGP_BALBcJ_T0081957.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16924978 16925898 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081958.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16925580 16927141 + Dmpk protein_coding processed_transcript MGP_BALBcJ_T0081959.1 MGP_BALBcJ_G0031738.1 mouse_genomes_project 7 16925658 16926574 + Dmpk protein_coding retained_intron MGP_BALBcJ_T0083053.1 MGP_BALBcJ_G0032023.1 mouse_genomes_project 7 29085971 29086569 + MGP_BALBcJ_P0083053 2200002J24Rik protein_coding protein_coding MGP_BALBcJ_T0087851.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143827479 143832890 - MGP_BALBcJ_P0087851 Trpm5 protein_coding protein_coding MGP_BALBcJ_T0087858.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143829417 143832366 - MGP_BALBcJ_P0087858 Trpm5 protein_coding protein_coding MGP_BALBcJ_T0087859.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143829543 143833182 - Trpm5 protein_coding retained_intron MGP_BALBcJ_T0087860.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143829855 143845541 - Trpm5 protein_coding retained_intron MGP_BALBcJ_T0087861.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143830115 143852953 - MGP_BALBcJ_P0087861 Trpm5 protein_coding protein_coding MGP_BALBcJ_T0087862.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143830506 143845456 - Trpm5 protein_coding retained_intron MGP_BALBcJ_T0087863.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143830670 143852917 - MGP_BALBcJ_P0087863 Trpm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087864.1 MGP_BALBcJ_G0033252.1 mouse_genomes_project 7 143839042 143840249 - Trpm5 protein_coding retained_intron MGP_BALBcJ_T0086296.1 MGP_BALBcJ_G0032930.1 mouse_genomes_project 7 121872838 121879048 + MGP_BALBcJ_P0086296 Hs3st2 protein_coding protein_coding MGP_BALBcJ_T0086297.1 MGP_BALBcJ_G0032930.1 mouse_genomes_project 7 121873269 121981149 + MGP_BALBcJ_P0086297 Hs3st2 protein_coding protein_coding MGP_BALBcJ_T0085964.1 MGP_BALBcJ_G0032854.1 mouse_genomes_project 7 112380666 112468409 + MGP_BALBcJ_P0085964 Usp47 protein_coding protein_coding MGP_BALBcJ_T0085965.1 MGP_BALBcJ_G0032854.1 mouse_genomes_project 7 112380868 112468414 + MGP_BALBcJ_P0085965 Usp47 protein_coding unknown_likely_coding MGP_BALBcJ_T0015755.1 MGP_BALBcJ_G0013852.1 mouse_genomes_project 7 34251203 34253466 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084068.1 MGP_BALBcJ_G0032268.1 mouse_genomes_project 7 46356209 46392079 - MGP_BALBcJ_P0084068 Uevld protein_coding protein_coding MGP_BALBcJ_T0081806.1 MGP_BALBcJ_G0031694.1 mouse_genomes_project 7 14317598 14328473 + MGP_BALBcJ_P0081806 Ap2s1 protein_coding protein_coding MGP_BALBcJ_T0081807.1 MGP_BALBcJ_G0031694.1 mouse_genomes_project 7 14317632 14328193 + MGP_BALBcJ_P0081807 Ap2s1 protein_coding protein_coding MGP_BALBcJ_T0081808.1 MGP_BALBcJ_G0031694.1 mouse_genomes_project 7 14317660 14328113 + MGP_BALBcJ_P0081808 Ap2s1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081809.1 MGP_BALBcJ_G0031694.1 mouse_genomes_project 7 14317726 14327927 + Ap2s1 protein_coding processed_transcript MGP_BALBcJ_T0081810.1 MGP_BALBcJ_G0031694.1 mouse_genomes_project 7 14325942 14328473 + Ap2s1 protein_coding retained_intron MGP_BALBcJ_T0085101.1 MGP_BALBcJ_G0032516.1 mouse_genomes_project 7 97697843 97763813 + Pak1 protein_coding retained_intron MGP_BALBcJ_T0085102.1 MGP_BALBcJ_G0032516.1 mouse_genomes_project 7 97697843 97828249 + MGP_BALBcJ_P0085102 Pak1 protein_coding protein_coding MGP_BALBcJ_T0085103.1 MGP_BALBcJ_G0032516.1 mouse_genomes_project 7 97739301 97782764 + MGP_BALBcJ_P0085103 Pak1 protein_coding protein_coding MGP_BALBcJ_T0085104.1 MGP_BALBcJ_G0032516.1 mouse_genomes_project 7 97751188 97828747 + MGP_BALBcJ_P0085104 Pak1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085105.1 MGP_BALBcJ_G0032516.1 mouse_genomes_project 7 97751188 97828747 + MGP_BALBcJ_P0085105 Pak1 protein_coding protein_coding MGP_BALBcJ_T0085106.1 MGP_BALBcJ_G0032516.1 mouse_genomes_project 7 97811950 97827648 + Pak1 protein_coding retained_intron MGP_BALBcJ_T0083168.1 MGP_BALBcJ_G0032043.1 mouse_genomes_project 7 29483131 29494607 + MGP_BALBcJ_P0083168 Lgi4 protein_coding protein_coding MGP_BALBcJ_T0083169.1 MGP_BALBcJ_G0032043.1 mouse_genomes_project 7 29484371 29487475 + MGP_BALBcJ_P0083169 Lgi4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083170.1 MGP_BALBcJ_G0032043.1 mouse_genomes_project 7 29484409 29487881 + MGP_BALBcJ_P0083170 Lgi4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083171.1 MGP_BALBcJ_G0032043.1 mouse_genomes_project 7 29487355 29488403 + MGP_BALBcJ_P0083171 Lgi4 protein_coding protein_coding MGP_BALBcJ_T0081671.1 MGP_BALBcJ_G0031646.1 mouse_genomes_project 7 10496334 10497222 - MGP_BALBcJ_P0081671 Vmn1r87 protein_coding protein_coding MGP_BALBcJ_T0086705.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127441315 127461185 + MGP_BALBcJ_P0086705 Sez6l2 protein_coding protein_coding MGP_BALBcJ_T0086706.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127441336 127448862 + MGP_BALBcJ_P0086706 Sez6l2 protein_coding protein_coding MGP_BALBcJ_T0086707.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127441481 127461175 + MGP_BALBcJ_P0086707 Sez6l2 protein_coding protein_coding MGP_BALBcJ_T0086708.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127441718 127460849 + MGP_BALBcJ_P0086708 Sez6l2 protein_coding protein_coding MGP_BALBcJ_T0086709.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127441790 127462317 + MGP_BALBcJ_P0086709 Sez6l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0086710.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127444603 127450028 + MGP_BALBcJ_P0086710 Sez6l2 protein_coding protein_coding MGP_BALBcJ_T0086711.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127458321 127460849 + Sez6l2 protein_coding retained_intron MGP_BALBcJ_T0086712.1 MGP_BALBcJ_G0032998.1 mouse_genomes_project 7 127458547 127461183 + MGP_BALBcJ_P0086712 Sez6l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005284.1 MGP_BALBcJ_G0004483.1 mouse_genomes_project 7 133259875 133262382 - Gm15582 antisense antisense MGP_BALBcJ_T0087890.1 MGP_BALBcJ_G0033260.1 mouse_genomes_project 7 144380250 144403232 - MGP_BALBcJ_P0087890 Tnfrsf26 protein_coding protein_coding MGP_BALBcJ_T0082205.1 MGP_BALBcJ_G0031817.1 mouse_genomes_project 7 22553730 22561649 + MGP_BALBcJ_P0082205 Irgq protein_coding protein_coding MGP_BALBcJ_T0083757.1 MGP_BALBcJ_G0032188.1 mouse_genomes_project 7 44432770 44448731 + MGP_BALBcJ_P0083757 Nosip protein_coding protein_coding MGP_BALBcJ_T0083758.1 MGP_BALBcJ_G0032188.1 mouse_genomes_project 7 44432770 44448731 + MGP_BALBcJ_P0083758 Nosip protein_coding protein_coding MGP_BALBcJ_T0015907.1 MGP_BALBcJ_G0014004.1 mouse_genomes_project 7 140468308 140468784 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087442.1 MGP_BALBcJ_G0033159.1 mouse_genomes_project 7 141064786 141066971 - MGP_BALBcJ_P0087442 Olfr530 protein_coding protein_coding MGP_BALBcJ_T0084904.1 MGP_BALBcJ_G0032455.1 mouse_genomes_project 7 85962871 85987917 - MGP_BALBcJ_P0084904 Vmn2r75 protein_coding protein_coding MGP_BALBcJ_T0010823.1 MGP_BALBcJ_G0008948.1 mouse_genomes_project 7 17233617 17233692 + Mir343 miRNA miRNA MGP_BALBcJ_T0082576.1 MGP_BALBcJ_G0031904.1 mouse_genomes_project 7 25904181 25923263 - MGP_BALBcJ_P0082576 Map3k10 protein_coding protein_coding MGP_BALBcJ_T0082577.1 MGP_BALBcJ_G0031904.1 mouse_genomes_project 7 25904470 25923267 - MGP_BALBcJ_P0082577 Map3k10 protein_coding protein_coding MGP_BALBcJ_T0082578.1 MGP_BALBcJ_G0031904.1 mouse_genomes_project 7 25912359 25913309 - Map3k10 protein_coding retained_intron MGP_BALBcJ_T0082579.1 MGP_BALBcJ_G0031904.1 mouse_genomes_project 7 25912381 25923026 - Map3k10 protein_coding retained_intron MGP_BALBcJ_T0082580.1 MGP_BALBcJ_G0031904.1 mouse_genomes_project 7 25916830 25923250 - MGP_BALBcJ_P0082580 Map3k10 protein_coding protein_coding MGP_BALBcJ_T0083803.1 MGP_BALBcJ_G0032203.1 mouse_genomes_project 7 44651784 44663266 + MGP_BALBcJ_P0083803 protein_coding protein_coding MGP_BALBcJ_T0083804.1 MGP_BALBcJ_G0032203.1 mouse_genomes_project 7 44656760 44659535 + protein_coding processed_transcript MGP_BALBcJ_T0083805.1 MGP_BALBcJ_G0032203.1 mouse_genomes_project 7 44657011 44660930 + protein_coding retained_intron MGP_BALBcJ_T0083806.1 MGP_BALBcJ_G0032203.1 mouse_genomes_project 7 44657047 44662853 + MGP_BALBcJ_P0083806 protein_coding protein_coding MGP_BALBcJ_T0083807.1 MGP_BALBcJ_G0032203.1 mouse_genomes_project 7 44657144 44663265 + MGP_BALBcJ_P0083807 protein_coding protein_coding MGP_BALBcJ_T0083808.1 MGP_BALBcJ_G0032203.1 mouse_genomes_project 7 44661407 44663270 + protein_coding retained_intron MGP_BALBcJ_T0005263.1 MGP_BALBcJ_G0004466.1 mouse_genomes_project 7 122467788 122474832 + Gm44987 antisense antisense MGP_BALBcJ_T0087084.1 MGP_BALBcJ_G0033070.1 mouse_genomes_project 7 129265800 129305674 + MGP_BALBcJ_P0087084 Sec23ip protein_coding protein_coding MGP_BALBcJ_T0087085.1 MGP_BALBcJ_G0033070.1 mouse_genomes_project 7 129265834 129270432 + Sec23ip protein_coding retained_intron MGP_BALBcJ_T0087086.1 MGP_BALBcJ_G0033070.1 mouse_genomes_project 7 129265892 129274990 + MGP_BALBcJ_P0087086 Sec23ip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087087.1 MGP_BALBcJ_G0033070.1 mouse_genomes_project 7 129266277 129271230 + MGP_BALBcJ_P0087087 Sec23ip protein_coding protein_coding MGP_BALBcJ_T0010896.1 MGP_BALBcJ_G0009021.1 mouse_genomes_project 7 114062624 114062726 - Gm23700 miRNA miRNA MGP_BALBcJ_T0081596.1 MGP_BALBcJ_G0031622.1 mouse_genomes_project 7 9670615 9671611 - MGP_BALBcJ_P0081596 Vmn1r83 protein_coding protein_coding MGP_BALBcJ_T0100096.1 MGP_BALBcJ_G0038132.1 mouse_genomes_project 7 122761872 122761979 + Gm23614 snRNA snRNA MGP_BALBcJ_T0002287.1 MGP_BALBcJ_G0002198.1 mouse_genomes_project 7 121736131 121736763 - TEC TEC MGP_BALBcJ_T0010852.1 MGP_BALBcJ_G0008977.1 mouse_genomes_project 7 47257695 47257805 + Gm22427 miRNA miRNA MGP_BALBcJ_T0086474.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126844913 126851933 - MGP_BALBcJ_P0086474 Spns1 protein_coding protein_coding MGP_BALBcJ_T0086475.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126844922 126852267 - Spns1 protein_coding retained_intron MGP_BALBcJ_T0086476.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126844922 126852267 - MGP_BALBcJ_P0086476 Spns1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086477.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126844922 126852267 - MGP_BALBcJ_P0086477 Spns1 protein_coding protein_coding MGP_BALBcJ_T0086478.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126845590 126851885 - MGP_BALBcJ_P0086478 Spns1 protein_coding protein_coding MGP_BALBcJ_T0086479.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126846075 126847775 - Spns1 protein_coding retained_intron MGP_BALBcJ_T0086480.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126846435 126851951 - MGP_BALBcJ_P0086480 Spns1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086481.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126846719 126847418 - Spns1 protein_coding retained_intron MGP_BALBcJ_T0086482.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126847600 126852063 - MGP_BALBcJ_P0086482 Spns1 protein_coding protein_coding MGP_BALBcJ_T0086483.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126848515 126849219 - Spns1 protein_coding retained_intron MGP_BALBcJ_T0086484.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126849131 126851584 - Spns1 protein_coding processed_transcript MGP_BALBcJ_T0086485.1 MGP_BALBcJ_G0032964.1 mouse_genomes_project 7 126851553 126852277 - Spns1 protein_coding processed_transcript MGP_BALBcJ_T0081632.1 MGP_BALBcJ_G0031636.1 mouse_genomes_project 7 10325635 10333580 + MGP_BALBcJ_P0081632 Zfp324 protein_coding protein_coding MGP_BALBcJ_T0081633.1 MGP_BALBcJ_G0031636.1 mouse_genomes_project 7 10325642 10333994 + MGP_BALBcJ_P0081633 Zfp324 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081634.1 MGP_BALBcJ_G0031636.1 mouse_genomes_project 7 10325664 10333557 + MGP_BALBcJ_P0081634 Zfp324 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101351.1 MGP_BALBcJ_G0039387.1 mouse_genomes_project 7 110369786 110369919 + Gm25636 snoRNA snoRNA MGP_BALBcJ_T0005251.1 MGP_BALBcJ_G0004459.1 mouse_genomes_project 7 116415493 116434251 + Gm45025 antisense antisense MGP_BALBcJ_T0082951.1 MGP_BALBcJ_G0032002.1 mouse_genomes_project 7 28800058 28802191 - MGP_BALBcJ_P0082951 Hcst protein_coding protein_coding MGP_BALBcJ_T0081385.1 MGP_BALBcJ_G0031531.1 mouse_genomes_project 7 1504172 1508394 - MGP_BALBcJ_P0081385 Tnni3 protein_coding protein_coding MGP_BALBcJ_T0081386.1 MGP_BALBcJ_G0031531.1 mouse_genomes_project 7 1504175 1506435 - Tnni3 protein_coding retained_intron MGP_BALBcJ_T0081387.1 MGP_BALBcJ_G0031531.1 mouse_genomes_project 7 1506305 1508660 - MGP_BALBcJ_P0081387 Tnni3 protein_coding protein_coding MGP_BALBcJ_T0081388.1 MGP_BALBcJ_G0031531.1 mouse_genomes_project 7 1506344 1510095 - MGP_BALBcJ_P0081388 Tnni3 protein_coding protein_coding MGP_BALBcJ_T0081389.1 MGP_BALBcJ_G0031531.1 mouse_genomes_project 7 1506909 1508308 - Tnni3 protein_coding retained_intron MGP_BALBcJ_T0081390.1 MGP_BALBcJ_G0031531.1 mouse_genomes_project 7 1507206 1508358 - Tnni3 protein_coding retained_intron MGP_BALBcJ_T0102821.1 MGP_BALBcJ_G0040636.1 mouse_genomes_project 7 104353311 104354307 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081704.1 MGP_BALBcJ_G0031655.1 mouse_genomes_project 7 11303713 11394048 - MGP_BALBcJ_P0081704 protein_coding protein_coding MGP_BALBcJ_T0086609.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264217 127267769 + MGP_BALBcJ_P0086609 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086610.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264237 127267766 + MGP_BALBcJ_P0086610 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086611.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264240 127265362 + MGP_BALBcJ_P0086611 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086612.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264261 127265687 + Ypel3 protein_coding processed_transcript MGP_BALBcJ_T0086613.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264261 127267768 + Ypel3 protein_coding processed_transcript MGP_BALBcJ_T0086614.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264263 127267769 + MGP_BALBcJ_P0086614 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086615.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264267 127267320 + MGP_BALBcJ_P0086615 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086616.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264409 127265135 + MGP_BALBcJ_P0086616 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086617.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264475 127267701 + MGP_BALBcJ_P0086617 Ypel3 protein_coding protein_coding MGP_BALBcJ_T0086618.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264768 127267486 + Ypel3 protein_coding processed_transcript MGP_BALBcJ_T0086619.1 MGP_BALBcJ_G0032985.1 mouse_genomes_project 7 127264841 127265554 + Ypel3 protein_coding retained_intron MGP_BALBcJ_T0086270.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121310353 121377699 + MGP_BALBcJ_P0086270 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086271.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121311122 121374474 + MGP_BALBcJ_P0086271 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086272.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121311140 121329386 + MGP_BALBcJ_P0086272 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086273.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121318775 121370949 + MGP_BALBcJ_P0086273 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086274.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121318775 121350917 + MGP_BALBcJ_P0086274 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086275.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121318787 121373976 + MGP_BALBcJ_P0086275 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086276.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121346915 121350436 + Eef2k protein_coding retained_intron MGP_BALBcJ_T0086277.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121360262 121365897 + MGP_BALBcJ_P0086277 Eef2k protein_coding protein_coding MGP_BALBcJ_T0086278.1 MGP_BALBcJ_G0032922.1 mouse_genomes_project 7 121362431 121374058 + Eef2k protein_coding processed_transcript MGP_BALBcJ_T0082091.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17637200 17646932 - Cblc protein_coding processed_transcript MGP_BALBcJ_T0082092.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17637944 17643760 - Cblc protein_coding processed_transcript MGP_BALBcJ_T0082093.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17638037 17656234 - MGP_BALBcJ_P0082093 Cblc protein_coding protein_coding MGP_BALBcJ_T0082094.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17638037 17656250 - MGP_BALBcJ_P0082094 Cblc protein_coding protein_coding MGP_BALBcJ_T0082095.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17644505 17651344 - Cblc protein_coding processed_transcript MGP_BALBcJ_T0082096.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17648248 17652315 - Cblc protein_coding processed_transcript MGP_BALBcJ_T0082097.1 MGP_BALBcJ_G0031777.1 mouse_genomes_project 7 17650953 17656246 - Cblc protein_coding retained_intron MGP_BALBcJ_T0082427.1 MGP_BALBcJ_G0031868.1 mouse_genomes_project 7 24395830 24396786 + MGP_BALBcJ_P0082427 Vmn1r184 protein_coding protein_coding MGP_BALBcJ_T0102758.1 MGP_BALBcJ_G0040573.1 mouse_genomes_project 7 47212697 47212899 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085816.1 MGP_BALBcJ_G0032806.1 mouse_genomes_project 7 108669143 108670088 - MGP_BALBcJ_P0085816 Olfr493 protein_coding protein_coding MGP_BALBcJ_T0010892.1 MGP_BALBcJ_G0009017.1 mouse_genomes_project 7 101923239 101923335 + Gm22655 miRNA miRNA MGP_BALBcJ_T0081591.1 MGP_BALBcJ_G0031618.1 mouse_genomes_project 7 9526049 9526630 + MGP_BALBcJ_P0081591 protein_coding protein_coding MGP_BALBcJ_T0084822.1 MGP_BALBcJ_G0032428.1 mouse_genomes_project 7 81616726 81616988 - MGP_BALBcJ_P0084822 Gm10160 protein_coding protein_coding MGP_BALBcJ_T0084463.1 MGP_BALBcJ_G0032362.1 mouse_genomes_project 7 73570313 73644941 - MGP_BALBcJ_P0084463 St8sia2 protein_coding protein_coding MGP_BALBcJ_T0084464.1 MGP_BALBcJ_G0032362.1 mouse_genomes_project 7 73591993 73644957 - MGP_BALBcJ_P0084464 St8sia2 protein_coding protein_coding MGP_BALBcJ_T0010903.1 MGP_BALBcJ_G0009028.1 mouse_genomes_project 7 127989021 127989112 + miRNA miRNA MGP_BALBcJ_T0010901.1 MGP_BALBcJ_G0009026.1 mouse_genomes_project 7 127538589 127538679 - Gm44343 miRNA miRNA MGP_BALBcJ_T0085548.1 MGP_BALBcJ_G0032666.1 mouse_genomes_project 7 103978482 103980029 - MGP_BALBcJ_P0085548 protein_coding protein_coding MGP_BALBcJ_T0085549.1 MGP_BALBcJ_G0032666.1 mouse_genomes_project 7 103978483 103979685 - protein_coding retained_intron MGP_BALBcJ_T0085550.1 MGP_BALBcJ_G0032666.1 mouse_genomes_project 7 103979399 103980047 - MGP_BALBcJ_P0085550 protein_coding protein_coding MGP_BALBcJ_T0011672.1 MGP_BALBcJ_G0009797.1 mouse_genomes_project 7 95062612 95062906 + Gm23884 misc_RNA misc_RNA MGP_BALBcJ_T0083841.1 MGP_BALBcJ_G0032212.1 mouse_genomes_project 7 44797503 44813782 - MGP_BALBcJ_P0083841 Ruvbl2 protein_coding protein_coding MGP_BALBcJ_T0083842.1 MGP_BALBcJ_G0032212.1 mouse_genomes_project 7 44797549 44810273 - MGP_BALBcJ_P0083842 Ruvbl2 protein_coding protein_coding MGP_BALBcJ_T0083843.1 MGP_BALBcJ_G0032212.1 mouse_genomes_project 7 44800602 44810359 - MGP_BALBcJ_P0083843 Ruvbl2 protein_coding protein_coding MGP_BALBcJ_T0081246.1 MGP_BALBcJ_G0031510.1 mouse_genomes_project 7 544620 558846 - MGP_BALBcJ_P0081246 Tmc4 protein_coding protein_coding MGP_BALBcJ_T0081247.1 MGP_BALBcJ_G0031510.1 mouse_genomes_project 7 544628 545721 - MGP_BALBcJ_P0081247 Tmc4 protein_coding protein_coding MGP_BALBcJ_T0081248.1 MGP_BALBcJ_G0031510.1 mouse_genomes_project 7 544795 550189 - Tmc4 protein_coding retained_intron MGP_BALBcJ_T0081249.1 MGP_BALBcJ_G0031510.1 mouse_genomes_project 7 550283 557995 - Tmc4 protein_coding retained_intron MGP_BALBcJ_T0081250.1 MGP_BALBcJ_G0031510.1 mouse_genomes_project 7 550397 558892 - Tmc4 protein_coding retained_intron MGP_BALBcJ_T0081251.1 MGP_BALBcJ_G0031510.1 mouse_genomes_project 7 556537 558852 - Tmc4 protein_coding retained_intron MGP_BALBcJ_T0084955.1 MGP_BALBcJ_G0032482.1 mouse_genomes_project 7 89485903 89486931 - MGP_BALBcJ_P0084955 protein_coding protein_coding MGP_BALBcJ_T0086793.1 MGP_BALBcJ_G0033015.1 mouse_genomes_project 7 127726445 127732502 + MGP_BALBcJ_P0086793 Zfp553 protein_coding protein_coding MGP_BALBcJ_T0086794.1 MGP_BALBcJ_G0033015.1 mouse_genomes_project 7 127726639 127732366 + MGP_BALBcJ_P0086794 Zfp553 protein_coding protein_coding MGP_BALBcJ_T0086795.1 MGP_BALBcJ_G0033015.1 mouse_genomes_project 7 127726678 127728443 + Zfp553 protein_coding retained_intron MGP_BALBcJ_T0084962.1 MGP_BALBcJ_G0032484.1 mouse_genomes_project 7 89684804 89723429 - MGP_BALBcJ_P0084962 Ccdc81 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084963.1 MGP_BALBcJ_G0032484.1 mouse_genomes_project 7 89685045 89723418 - MGP_BALBcJ_P0084963 Ccdc81 protein_coding protein_coding MGP_BALBcJ_T0082149.1 MGP_BALBcJ_G0031803.1 mouse_genomes_project 7 22183156 22203658 - MGP_BALBcJ_P0082149 protein_coding protein_coding MGP_BALBcJ_T0082150.1 MGP_BALBcJ_G0031803.1 mouse_genomes_project 7 22186085 22198460 - MGP_BALBcJ_P0082150 protein_coding protein_coding MGP_BALBcJ_T0082151.1 MGP_BALBcJ_G0031803.1 mouse_genomes_project 7 22187290 22207359 - MGP_BALBcJ_P0082151 protein_coding protein_coding MGP_BALBcJ_T0082152.1 MGP_BALBcJ_G0031803.1 mouse_genomes_project 7 22199196 22203636 - protein_coding retained_intron MGP_BALBcJ_T0082153.1 MGP_BALBcJ_G0031803.1 mouse_genomes_project 7 22200617 22207359 - protein_coding processed_transcript MGP_BALBcJ_T0082631.1 MGP_BALBcJ_G0031925.1 mouse_genomes_project 7 26632836 26634881 + MGP_BALBcJ_P0082631 Rps16 protein_coding protein_coding MGP_BALBcJ_T0082632.1 MGP_BALBcJ_G0031925.1 mouse_genomes_project 7 26632947 26634881 + Rps16 protein_coding retained_intron MGP_BALBcJ_T0082633.1 MGP_BALBcJ_G0031925.1 mouse_genomes_project 7 26633108 26634881 + Rps16 protein_coding processed_transcript MGP_BALBcJ_T0099007.1 MGP_BALBcJ_G0037050.1 mouse_genomes_project 7 3492167 3492750 + Gm16306 sense_intronic sense_intronic MGP_BALBcJ_T0002308.1 MGP_BALBcJ_G0002219.1 mouse_genomes_project 7 128305546 128306885 - TEC TEC MGP_BALBcJ_T0082341.1 MGP_BALBcJ_G0031849.1 mouse_genomes_project 7 23377047 23426762 + MGP_BALBcJ_P0082341 Megf8 protein_coding protein_coding MGP_BALBcJ_T0082342.1 MGP_BALBcJ_G0031849.1 mouse_genomes_project 7 23406827 23426759 + Megf8 protein_coding retained_intron MGP_BALBcJ_T0005257.1 MGP_BALBcJ_G0004463.1 mouse_genomes_project 7 121791858 121874081 - Gm45077 antisense antisense MGP_BALBcJ_T0098649.1 MGP_BALBcJ_G0036703.1 mouse_genomes_project 7 113507316 113507427 + Gm23662 rRNA rRNA MGP_BALBcJ_T0085350.1 MGP_BALBcJ_G0032571.1 mouse_genomes_project 7 101582083 101582885 - MGP_BALBcJ_P0085350 protein_coding protein_coding MGP_BALBcJ_T0085308.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101276846 101289660 - MGP_BALBcJ_P0085308 Atg16l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0085309.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101276854 101289660 - MGP_BALBcJ_P0085309 Atg16l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085310.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101277077 101289721 - MGP_BALBcJ_P0085310 Atg16l2 protein_coding protein_coding MGP_BALBcJ_T0085311.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101277079 101277922 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085312.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101277079 101289704 - MGP_BALBcJ_P0085312 Atg16l2 protein_coding protein_coding MGP_BALBcJ_T0085313.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101277088 101289884 - MGP_BALBcJ_P0085313 Atg16l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085314.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101277290 101278039 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085315.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101278106 101279606 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085316.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101278623 101279609 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085317.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101279037 101279851 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085318.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101279466 101284417 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085319.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101279865 101284430 - MGP_BALBcJ_P0085319 Atg16l2 protein_coding protein_coding MGP_BALBcJ_T0085320.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101280826 101284360 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085321.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101283875 101284817 - Atg16l2 protein_coding retained_intron MGP_BALBcJ_T0085322.1 MGP_BALBcJ_G0032567.1 mouse_genomes_project 7 101284542 101289704 - MGP_BALBcJ_P0085322 Atg16l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084097.1 MGP_BALBcJ_G0032287.1 mouse_genomes_project 7 48425653 48440821 - MGP_BALBcJ_P0084097 E2f8 protein_coding protein_coding MGP_BALBcJ_T0084098.1 MGP_BALBcJ_G0032287.1 mouse_genomes_project 7 48425653 48440266 - MGP_BALBcJ_P0084098 E2f8 protein_coding protein_coding MGP_BALBcJ_T0084099.1 MGP_BALBcJ_G0032287.1 mouse_genomes_project 7 48431331 48434476 - E2f8 protein_coding retained_intron MGP_BALBcJ_T0084100.1 MGP_BALBcJ_G0032287.1 mouse_genomes_project 7 48438057 48440229 - E2f8 protein_coding retained_intron MGP_BALBcJ_T0008993.1 MGP_BALBcJ_G0007241.1 mouse_genomes_project 7 125834888 125837041 + 4930571K23Rik lincRNA lincRNA MGP_BALBcJ_T0008994.1 MGP_BALBcJ_G0007241.1 mouse_genomes_project 7 125835039 125837035 + 4930571K23Rik lincRNA lincRNA MGP_BALBcJ_T0005206.1 MGP_BALBcJ_G0004429.1 mouse_genomes_project 7 77944076 77945202 + 4921513I08Rik antisense antisense MGP_BALBcJ_T0087441.1 MGP_BALBcJ_G0033158.1 mouse_genomes_project 7 141035777 141036713 - MGP_BALBcJ_P0087441 Olfr60 protein_coding protein_coding MGP_BALBcJ_T0086330.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122595298 122626139 - MGP_BALBcJ_P0086330 Palb2 protein_coding protein_coding MGP_BALBcJ_T0086331.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122595298 122626037 - MGP_BALBcJ_P0086331 Palb2 protein_coding protein_coding MGP_BALBcJ_T0086332.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122595298 122626102 - MGP_BALBcJ_P0086332 Palb2 protein_coding protein_coding MGP_BALBcJ_T0086333.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122595301 122600077 - Palb2 protein_coding retained_intron MGP_BALBcJ_T0086334.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122595303 122617638 - MGP_BALBcJ_P0086334 Palb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086335.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122599608 122626081 - MGP_BALBcJ_P0086335 Palb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086336.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122599608 122626110 - MGP_BALBcJ_P0086336 Palb2 protein_coding protein_coding MGP_BALBcJ_T0086337.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122618774 122626112 - Palb2 protein_coding retained_intron MGP_BALBcJ_T0086338.1 MGP_BALBcJ_G0032939.1 mouse_genomes_project 7 122624033 122626178 - Palb2 protein_coding retained_intron MGP_BALBcJ_T0085838.1 MGP_BALBcJ_G0032825.1 mouse_genomes_project 7 109347175 109367412 + MGP_BALBcJ_P0085838 Tub protein_coding protein_coding MGP_BALBcJ_T0085839.1 MGP_BALBcJ_G0032825.1 mouse_genomes_project 7 109364377 109366515 + Tub protein_coding retained_intron MGP_BALBcJ_T0082503.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25544422 25576668 - MGP_BALBcJ_P0082503 Ltbp4 protein_coding protein_coding MGP_BALBcJ_T0082504.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25544426 25572658 - MGP_BALBcJ_P0082504 Ltbp4 protein_coding protein_coding MGP_BALBcJ_T0082505.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25544428 25576668 - MGP_BALBcJ_P0082505 Ltbp4 protein_coding protein_coding MGP_BALBcJ_T0082506.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25545284 25572608 - MGP_BALBcJ_P0082506 Ltbp4 protein_coding protein_coding MGP_BALBcJ_T0082507.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25545365 25546257 - Ltbp4 protein_coding retained_intron MGP_BALBcJ_T0082508.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25545909 25549911 - MGP_BALBcJ_P0082508 Ltbp4 protein_coding protein_coding MGP_BALBcJ_T0082509.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25546848 25549930 - Ltbp4 protein_coding retained_intron MGP_BALBcJ_T0082510.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25548252 25549714 - Ltbp4 protein_coding retained_intron MGP_BALBcJ_T0082511.1 MGP_BALBcJ_G0031890.1 mouse_genomes_project 7 25550811 25572643 - Ltbp4 protein_coding processed_transcript MGP_BALBcJ_T0102703.1 MGP_BALBcJ_G0040518.1 mouse_genomes_project 7 11998419 11998939 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083427.1 MGP_BALBcJ_G0032097.1 mouse_genomes_project 7 40571509 40602755 - MGP_BALBcJ_P0083427 protein_coding protein_coding MGP_BALBcJ_T0083428.1 MGP_BALBcJ_G0032097.1 mouse_genomes_project 7 40571509 40589879 - MGP_BALBcJ_P0083428 protein_coding protein_coding MGP_BALBcJ_T0083429.1 MGP_BALBcJ_G0032097.1 mouse_genomes_project 7 40573809 40589845 - MGP_BALBcJ_P0083429 protein_coding protein_coding MGP_BALBcJ_T0083430.1 MGP_BALBcJ_G0032097.1 mouse_genomes_project 7 40591150 40602719 - MGP_BALBcJ_P0083430 protein_coding protein_coding MGP_BALBcJ_T0084953.1 MGP_BALBcJ_G0032480.1 mouse_genomes_project 7 89267135 89272877 + MGP_BALBcJ_P0084953 Fzd4 protein_coding protein_coding MGP_BALBcJ_T0083576.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43660469 43710561 + MGP_BALBcJ_P0083576 Shank1 protein_coding protein_coding MGP_BALBcJ_T0083577.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43662718 43707612 + MGP_BALBcJ_P0083577 Shank1 protein_coding protein_coding MGP_BALBcJ_T0083578.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43662737 43707462 + MGP_BALBcJ_P0083578 Shank1 protein_coding protein_coding MGP_BALBcJ_T0083579.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43686188 43693909 + Shank1 protein_coding processed_transcript MGP_BALBcJ_T0083580.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43686254 43710083 + MGP_BALBcJ_P0083580 Shank1 protein_coding unknown_likely_coding MGP_BALBcJ_T0083581.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43692305 43701483 + Shank1 protein_coding retained_intron MGP_BALBcJ_T0083582.1 MGP_BALBcJ_G0032149.1 mouse_genomes_project 7 43700886 43702182 + Shank1 protein_coding retained_intron MGP_BALBcJ_T0005235.1 MGP_BALBcJ_G0004449.1 mouse_genomes_project 7 96725406 96729857 - Gm44633 antisense antisense MGP_BALBcJ_T0101321.1 MGP_BALBcJ_G0039357.1 mouse_genomes_project 7 44763567 44763721 + Gm22478 snoRNA snoRNA MGP_BALBcJ_T0081880.1 MGP_BALBcJ_G0031711.1 mouse_genomes_project 7 15436723 15492436 + MGP_BALBcJ_P0081880 Ceacam5 protein_coding protein_coding MGP_BALBcJ_T0015837.1 MGP_BALBcJ_G0013934.1 mouse_genomes_project 7 94058582 94058852 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015863.1 MGP_BALBcJ_G0013960.1 mouse_genomes_project 7 106528088 106529126 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008807.1 MGP_BALBcJ_G0007112.1 mouse_genomes_project 7 29317257 29333057 + lincRNA lincRNA MGP_BALBcJ_T0083521.1 MGP_BALBcJ_G0032128.1 mouse_genomes_project 7 42958601 42973876 + MGP_BALBcJ_P0083521 Klk13 protein_coding protein_coding MGP_BALBcJ_T0083522.1 MGP_BALBcJ_G0032128.1 mouse_genomes_project 7 42959433 42967345 + MGP_BALBcJ_P0083522 Klk13 protein_coding protein_coding MGP_BALBcJ_T0083523.1 MGP_BALBcJ_G0032128.1 mouse_genomes_project 7 42960993 42969901 + MGP_BALBcJ_P0083523 Klk13 protein_coding protein_coding MGP_BALBcJ_T0002312.1 MGP_BALBcJ_G0002223.1 mouse_genomes_project 7 129240348 129241344 - TEC TEC MGP_BALBcJ_T0083944.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45180559 45201026 + MGP_BALBcJ_P0083944 Lmtk3 protein_coding protein_coding MGP_BALBcJ_T0083945.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45180622 45187765 + MGP_BALBcJ_P0083945 Lmtk3 protein_coding protein_coding MGP_BALBcJ_T0083946.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45180768 45200991 + MGP_BALBcJ_P0083946 Lmtk3 protein_coding protein_coding MGP_BALBcJ_T0083947.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45182210 45201026 + MGP_BALBcJ_P0083947 Lmtk3 protein_coding protein_coding MGP_BALBcJ_T0083948.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45182217 45184779 + MGP_BALBcJ_P0083948 Lmtk3 protein_coding protein_coding MGP_BALBcJ_T0083949.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45182340 45184589 + Lmtk3 protein_coding retained_intron MGP_BALBcJ_T0083950.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45183387 45189395 + MGP_BALBcJ_P0083950 Lmtk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083951.1 MGP_BALBcJ_G0032238.1 mouse_genomes_project 7 45184734 45189434 + MGP_BALBcJ_P0083951 Lmtk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083536.1 MGP_BALBcJ_G0032134.1 mouse_genomes_project 7 43057652 43063103 + MGP_BALBcJ_P0083536 Klk7 protein_coding protein_coding MGP_BALBcJ_T0102710.1 MGP_BALBcJ_G0040525.1 mouse_genomes_project 7 13365390 13371217 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084199.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55614698 55634954 + MGP_BALBcJ_P0084199 Herc2 protein_coding protein_coding MGP_BALBcJ_T0084200.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55614755 55794973 + MGP_BALBcJ_P0084200 Herc2 protein_coding protein_coding MGP_BALBcJ_T0084201.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55614891 55794936 + MGP_BALBcJ_P0084201 Herc2 protein_coding protein_coding MGP_BALBcJ_T0084202.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55615267 55673937 + MGP_BALBcJ_P0084202 Herc2 protein_coding protein_coding MGP_BALBcJ_T0084203.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55615379 55794305 + MGP_BALBcJ_P0084203 Herc2 protein_coding protein_coding MGP_BALBcJ_T0084204.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55615449 55639902 + Herc2 protein_coding retained_intron MGP_BALBcJ_T0084205.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55723376 55728507 + Herc2 protein_coding processed_transcript MGP_BALBcJ_T0084206.1 MGP_BALBcJ_G0032307.1 mouse_genomes_project 7 55783673 55794274 + MGP_BALBcJ_P0084206 Herc2 protein_coding protein_coding MGP_BALBcJ_T0100064.1 MGP_BALBcJ_G0038100.1 mouse_genomes_project 7 45864362 45864465 + Gm22969 snRNA snRNA MGP_BALBcJ_T0015847.1 MGP_BALBcJ_G0013944.1 mouse_genomes_project 7 97834975 97835366 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086359.1 MGP_BALBcJ_G0032945.1 mouse_genomes_project 7 123169393 123271741 + MGP_BALBcJ_P0086359 Cacng3 protein_coding protein_coding MGP_BALBcJ_T0086360.1 MGP_BALBcJ_G0032945.1 mouse_genomes_project 7 123170292 123270769 + MGP_BALBcJ_P0086360 Cacng3 protein_coding protein_coding MGP_BALBcJ_T0086361.1 MGP_BALBcJ_G0032945.1 mouse_genomes_project 7 123170319 123270888 + MGP_BALBcJ_P0086361 Cacng3 protein_coding protein_coding MGP_BALBcJ_T0085562.1 MGP_BALBcJ_G0032678.1 mouse_genomes_project 7 104161318 104162486 + MGP_BALBcJ_P0085562 Olfr638 protein_coding protein_coding MGP_BALBcJ_T0081961.1 MGP_BALBcJ_G0031740.1 mouse_genomes_project 7 16932636 16951724 - MGP_BALBcJ_P0081961 Gm4969 protein_coding protein_coding MGP_BALBcJ_T0081962.1 MGP_BALBcJ_G0031740.1 mouse_genomes_project 7 16935141 16951697 - MGP_BALBcJ_P0081962 Gm4969 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008999.1 MGP_BALBcJ_G0007245.1 mouse_genomes_project 7 127222579 127224338 + 4930448A20Rik lincRNA lincRNA MGP_BALBcJ_T0083287.1 MGP_BALBcJ_G0032068.1 mouse_genomes_project 7 33789130 33799280 - MGP_BALBcJ_P0083287 Cebpg protein_coding protein_coding MGP_BALBcJ_T0083288.1 MGP_BALBcJ_G0032068.1 mouse_genomes_project 7 33792604 33794214 - Cebpg protein_coding retained_intron MGP_BALBcJ_T0083289.1 MGP_BALBcJ_G0032068.1 mouse_genomes_project 7 33793023 33798647 - MGP_BALBcJ_P0083289 Cebpg protein_coding protein_coding MGP_BALBcJ_T0083290.1 MGP_BALBcJ_G0032068.1 mouse_genomes_project 7 33793573 33798690 - Cebpg protein_coding processed_transcript MGP_BALBcJ_T0010811.1 MGP_BALBcJ_G0008936.1 mouse_genomes_project 7 120020 120102 + Mir294 miRNA miRNA MGP_BALBcJ_T0086578.1 MGP_BALBcJ_G0032981.1 mouse_genomes_project 7 127174823 127176110 + Bola2 protein_coding retained_intron MGP_BALBcJ_T0086579.1 MGP_BALBcJ_G0032981.1 mouse_genomes_project 7 127174858 127176481 + MGP_BALBcJ_P0086579 Bola2 protein_coding protein_coding MGP_BALBcJ_T0086580.1 MGP_BALBcJ_G0032981.1 mouse_genomes_project 7 127175388 127176116 + Bola2 protein_coding processed_transcript MGP_BALBcJ_T0086581.1 MGP_BALBcJ_G0032981.1 mouse_genomes_project 7 127175395 127176120 + MGP_BALBcJ_P0086581 Bola2 protein_coding protein_coding MGP_BALBcJ_T0086582.1 MGP_BALBcJ_G0032981.1 mouse_genomes_project 7 127175425 127179227 + Bola2 protein_coding retained_intron MGP_BALBcJ_T0083781.1 MGP_BALBcJ_G0032200.1 mouse_genomes_project 7 44582039 44586399 - MGP_BALBcJ_P0083781 Dkkl1 protein_coding protein_coding MGP_BALBcJ_T0082666.1 MGP_BALBcJ_G0031933.1 mouse_genomes_project 7 26794363 26796083 - MGP_BALBcJ_P0082666 protein_coding protein_coding MGP_BALBcJ_T0084069.1 MGP_BALBcJ_G0032269.1 mouse_genomes_project 7 46419378 46423594 + protein_coding processed_transcript MGP_BALBcJ_T0084070.1 MGP_BALBcJ_G0032269.1 mouse_genomes_project 7 46419459 46423602 + protein_coding processed_transcript MGP_BALBcJ_T0084071.1 MGP_BALBcJ_G0032269.1 mouse_genomes_project 7 46422618 46423595 + MGP_BALBcJ_P0084071 protein_coding protein_coding MGP_BALBcJ_T0015850.1 MGP_BALBcJ_G0013947.1 mouse_genomes_project 7 98386908 98387225 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085547.1 MGP_BALBcJ_G0032665.1 mouse_genomes_project 7 103963793 103965241 - MGP_BALBcJ_P0085547 protein_coding protein_coding MGP_BALBcJ_T0081882.1 MGP_BALBcJ_G0031713.1 mouse_genomes_project 7 15704443 15710878 + MGP_BALBcJ_P0081882 Ceacam11 protein_coding protein_coding MGP_BALBcJ_T0086807.1 MGP_BALBcJ_G0033020.1 mouse_genomes_project 7 127858079 127860708 - MGP_BALBcJ_P0086807 Zfp768 protein_coding protein_coding MGP_BALBcJ_T0086808.1 MGP_BALBcJ_G0033020.1 mouse_genomes_project 7 127858079 127860874 - MGP_BALBcJ_P0086808 Zfp768 protein_coding protein_coding MGP_BALBcJ_T0083717.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220465 44225783 + MGP_BALBcJ_P0083717 Pnkp protein_coding protein_coding MGP_BALBcJ_T0083718.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220477 44220832 + MGP_BALBcJ_P0083718 Pnkp protein_coding protein_coding MGP_BALBcJ_T0083719.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220485 44226125 + MGP_BALBcJ_P0083719 Pnkp protein_coding protein_coding MGP_BALBcJ_T0083720.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220493 44225789 + Pnkp protein_coding retained_intron MGP_BALBcJ_T0083721.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220499 44223757 + MGP_BALBcJ_P0083721 Pnkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083722.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220666 44224684 + MGP_BALBcJ_P0083722 Pnkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083723.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220668 44225782 + MGP_BALBcJ_P0083723 Pnkp protein_coding protein_coding MGP_BALBcJ_T0083724.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220674 44225783 + MGP_BALBcJ_P0083724 Pnkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083725.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220705 44225774 + MGP_BALBcJ_P0083725 Pnkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083726.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44220720 44225783 + MGP_BALBcJ_P0083726 Pnkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083727.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44223003 44225781 + Pnkp protein_coding retained_intron MGP_BALBcJ_T0083728.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44223755 44224702 + Pnkp protein_coding retained_intron MGP_BALBcJ_T0083729.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44224707 44225783 + MGP_BALBcJ_P0083729 Pnkp protein_coding non_stop_decay MGP_BALBcJ_T0083730.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44224846 44225781 + MGP_BALBcJ_P0083730 Pnkp protein_coding protein_coding MGP_BALBcJ_T0083731.1 MGP_BALBcJ_G0032173.1 mouse_genomes_project 7 44225029 44225803 + Pnkp protein_coding retained_intron MGP_BALBcJ_T0010908.1 MGP_BALBcJ_G0009033.1 mouse_genomes_project 7 134576409 134576524 - Gm23631 miRNA miRNA MGP_BALBcJ_T0084784.1 MGP_BALBcJ_G0032417.1 mouse_genomes_project 7 80957249 81082450 + MGP_BALBcJ_P0084784 Pde8a protein_coding protein_coding MGP_BALBcJ_T0084785.1 MGP_BALBcJ_G0032417.1 mouse_genomes_project 7 81042541 81062228 + Pde8a protein_coding processed_transcript MGP_BALBcJ_T0084786.1 MGP_BALBcJ_G0032417.1 mouse_genomes_project 7 81053527 81067353 + Pde8a protein_coding processed_transcript MGP_BALBcJ_T0008977.1 MGP_BALBcJ_G0007230.1 mouse_genomes_project 7 115451806 115485830 + Gm44944 lincRNA lincRNA MGP_BALBcJ_T0008978.1 MGP_BALBcJ_G0007230.1 mouse_genomes_project 7 115484404 115486119 + Gm44944 lincRNA lincRNA MGP_BALBcJ_T0008979.1 MGP_BALBcJ_G0007230.1 mouse_genomes_project 7 115485843 115486148 + Gm44944 lincRNA lincRNA MGP_BALBcJ_T0015799.1 MGP_BALBcJ_G0013896.1 mouse_genomes_project 7 64743139 64744395 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015831.1 MGP_BALBcJ_G0013928.1 mouse_genomes_project 7 85557221 85557798 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102713.1 MGP_BALBcJ_G0040528.1 mouse_genomes_project 7 15373954 15380379 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083759.1 MGP_BALBcJ_G0032189.1 mouse_genomes_project 7 44453162 44462456 - MGP_BALBcJ_P0083759 Rcn3 protein_coding protein_coding MGP_BALBcJ_T0008858.1 MGP_BALBcJ_G0007153.1 mouse_genomes_project 7 63575365 63580394 + Gm45052 lincRNA lincRNA MGP_BALBcJ_T0102679.1 MGP_BALBcJ_G0040494.1 mouse_genomes_project 7 7905853 7906715 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015704.1 MGP_BALBcJ_G0013801.1 mouse_genomes_project 7 14082188 14082960 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081985.1 MGP_BALBcJ_G0031748.1 mouse_genomes_project 7 17100726 17116991 - MGP_BALBcJ_P0081985 Vasp protein_coding protein_coding MGP_BALBcJ_T0081986.1 MGP_BALBcJ_G0031748.1 mouse_genomes_project 7 17101381 17101929 - Vasp protein_coding retained_intron MGP_BALBcJ_T0081987.1 MGP_BALBcJ_G0031748.1 mouse_genomes_project 7 17104454 17104870 - Vasp protein_coding processed_transcript MGP_BALBcJ_T0081988.1 MGP_BALBcJ_G0031748.1 mouse_genomes_project 7 17104655 17110361 - Vasp protein_coding processed_transcript MGP_BALBcJ_T0083756.1 MGP_BALBcJ_G0032187.1 mouse_genomes_project 7 44423959 44431993 - MGP_BALBcJ_P0083756 Prrg2 protein_coding protein_coding MGP_BALBcJ_T0098639.1 MGP_BALBcJ_G0036693.1 mouse_genomes_project 7 3612380 3612488 + n-R5s150 rRNA rRNA MGP_BALBcJ_T0086468.1 MGP_BALBcJ_G0032963.1 mouse_genomes_project 7 126838461 126844397 - MGP_BALBcJ_P0086468 Lat protein_coding protein_coding MGP_BALBcJ_T0086469.1 MGP_BALBcJ_G0032963.1 mouse_genomes_project 7 126838464 126844390 - MGP_BALBcJ_P0086469 Lat protein_coding protein_coding MGP_BALBcJ_T0086470.1 MGP_BALBcJ_G0032963.1 mouse_genomes_project 7 126838541 126839524 - Lat protein_coding retained_intron MGP_BALBcJ_T0086471.1 MGP_BALBcJ_G0032963.1 mouse_genomes_project 7 126842373 126844426 - Lat protein_coding retained_intron MGP_BALBcJ_T0086472.1 MGP_BALBcJ_G0032963.1 mouse_genomes_project 7 126842954 126844350 - MGP_BALBcJ_P0086472 Lat protein_coding protein_coding MGP_BALBcJ_T0086473.1 MGP_BALBcJ_G0032963.1 mouse_genomes_project 7 126843512 126844196 - Lat protein_coding retained_intron MGP_BALBcJ_T0008980.1 MGP_BALBcJ_G0007231.1 mouse_genomes_project 7 116989399 116991499 + Gm45151 lincRNA lincRNA MGP_BALBcJ_T0098388.1 MGP_BALBcJ_G0036442.1 mouse_genomes_project 7 81753067 81753681 + pseudogene pseudogene MGP_BALBcJ_T0005145.1 MGP_BALBcJ_G0004385.1 mouse_genomes_project 7 23282735 23284306 + 9130221H12Rik antisense antisense MGP_BALBcJ_T0005146.1 MGP_BALBcJ_G0004385.1 mouse_genomes_project 7 23282771 23284312 + 9130221H12Rik antisense antisense MGP_BALBcJ_T0102833.1 MGP_BALBcJ_G0040648.1 mouse_genomes_project 7 142945528 142949661 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085646.1 MGP_BALBcJ_G0032732.1 mouse_genomes_project 7 105466435 105467497 - MGP_BALBcJ_P0085646 Olfr690 protein_coding protein_coding MGP_BALBcJ_T0018303.1 MGP_BALBcJ_G0015602.1 mouse_genomes_project 7 42940681 43044411 - 2310002F09Rik processed_transcript antisense MGP_BALBcJ_T0018304.1 MGP_BALBcJ_G0015602.1 mouse_genomes_project 7 42991848 42995176 - 2310002F09Rik processed_transcript antisense MGP_BALBcJ_T0018305.1 MGP_BALBcJ_G0015602.1 mouse_genomes_project 7 43004038 43004643 - 2310002F09Rik processed_transcript TEC MGP_BALBcJ_T0018306.1 MGP_BALBcJ_G0015602.1 mouse_genomes_project 7 43043289 43044424 - 2310002F09Rik processed_transcript antisense MGP_BALBcJ_T0087260.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134316493 134339517 - Uros protein_coding retained_intron MGP_BALBcJ_T0087261.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134316606 134339381 - MGP_BALBcJ_P0087261 Uros protein_coding protein_coding MGP_BALBcJ_T0087262.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134316606 134339492 - MGP_BALBcJ_P0087262 Uros protein_coding protein_coding MGP_BALBcJ_T0087263.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134316615 134339704 - MGP_BALBcJ_P0087263 Uros protein_coding protein_coding MGP_BALBcJ_T0087264.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134317211 134327610 - Uros protein_coding processed_transcript MGP_BALBcJ_T0087265.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134322384 134339482 - MGP_BALBcJ_P0087265 Uros protein_coding protein_coding MGP_BALBcJ_T0087266.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134332269 134333047 - MGP_BALBcJ_P0087266 Uros protein_coding protein_coding MGP_BALBcJ_T0087267.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134332323 134339480 - MGP_BALBcJ_P0087267 Uros protein_coding protein_coding MGP_BALBcJ_T0087268.1 MGP_BALBcJ_G0033106.1 mouse_genomes_project 7 134332325 134340495 - MGP_BALBcJ_P0087268 Uros protein_coding protein_coding MGP_BALBcJ_T0015894.1 MGP_BALBcJ_G0013991.1 mouse_genomes_project 7 128522638 128523417 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081928.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16856286 16887958 + MGP_BALBcJ_P0081928 Sympk protein_coding protein_coding MGP_BALBcJ_T0081929.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16856329 16869010 + MGP_BALBcJ_P0081929 Sympk protein_coding protein_coding MGP_BALBcJ_T0081930.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16856332 16868123 + Sympk protein_coding retained_intron MGP_BALBcJ_T0081931.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16856335 16885117 + MGP_BALBcJ_P0081931 Sympk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081932.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16879103 16883425 + Sympk protein_coding processed_transcript MGP_BALBcJ_T0081933.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16885701 16887953 + Sympk protein_coding processed_transcript MGP_BALBcJ_T0081934.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16885768 16887959 + MGP_BALBcJ_P0081934 Sympk protein_coding protein_coding MGP_BALBcJ_T0081935.1 MGP_BALBcJ_G0031735.1 mouse_genomes_project 7 16885798 16887249 + Sympk protein_coding retained_intron MGP_BALBcJ_T0002192.1 MGP_BALBcJ_G0002104.1 mouse_genomes_project 7 14655343 14656265 + TEC TEC MGP_BALBcJ_T0015711.1 MGP_BALBcJ_G0013808.1 mouse_genomes_project 7 15354955 15355483 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085769.1 MGP_BALBcJ_G0032766.1 mouse_genomes_project 7 107201006 107201957 - MGP_BALBcJ_P0085769 protein_coding protein_coding MGP_BALBcJ_T0086553.1 MGP_BALBcJ_G0032976.1 mouse_genomes_project 7 127067159 127073091 - MGP_BALBcJ_P0086553 Il27 protein_coding protein_coding MGP_BALBcJ_T0010848.1 MGP_BALBcJ_G0008973.1 mouse_genomes_project 7 44492950 44493015 + Mir150 miRNA miRNA MGP_BALBcJ_T0085811.1 MGP_BALBcJ_G0032801.1 mouse_genomes_project 7 108480603 108489391 - MGP_BALBcJ_P0085811 protein_coding protein_coding MGP_BALBcJ_T0015832.1 MGP_BALBcJ_G0013929.1 mouse_genomes_project 7 86128047 86128297 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002197.1 MGP_BALBcJ_G0002109.1 mouse_genomes_project 7 29634739 29635497 + TEC TEC MGP_BALBcJ_T0005272.1 MGP_BALBcJ_G0004474.1 mouse_genomes_project 7 128088891 128094378 - Gm44759 antisense antisense MGP_BALBcJ_T0086620.1 MGP_BALBcJ_G0032986.1 mouse_genomes_project 7 127268737 127272816 + MGP_BALBcJ_P0086620 Tbx6 protein_coding protein_coding MGP_BALBcJ_T0086621.1 MGP_BALBcJ_G0032986.1 mouse_genomes_project 7 127268737 127272615 + MGP_BALBcJ_P0086621 Tbx6 protein_coding protein_coding MGP_BALBcJ_T0085798.1 MGP_BALBcJ_G0032788.1 mouse_genomes_project 7 108098752 108099679 + MGP_BALBcJ_P0085798 Olfr467 protein_coding protein_coding MGP_BALBcJ_T0081551.1 MGP_BALBcJ_G0031590.1 mouse_genomes_project 7 3579303 3585872 - MGP_BALBcJ_P0081551 Olfr5 protein_coding protein_coding MGP_BALBcJ_T0102832.1 MGP_BALBcJ_G0040647.1 mouse_genomes_project 7 128844276 128844470 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085401.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955737 101963959 - MGP_BALBcJ_P0085401 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085402.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955742 101963521 - MGP_BALBcJ_P0085402 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085403.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955742 101963972 - MGP_BALBcJ_P0085403 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085404.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955743 101976218 - MGP_BALBcJ_P0085404 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085405.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955743 101976280 - MGP_BALBcJ_P0085405 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085406.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955743 101963946 - MGP_BALBcJ_P0085406 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085407.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955747 101963930 - MGP_BALBcJ_P0085407 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085408.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955754 101976307 - Lrrc51 protein_coding processed_transcript MGP_BALBcJ_T0085409.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955911 101976214 - MGP_BALBcJ_P0085409 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0085410.1 MGP_BALBcJ_G0032581.1 mouse_genomes_project 7 101955927 101976242 - MGP_BALBcJ_P0085410 Lrrc51 protein_coding protein_coding MGP_BALBcJ_T0002229.1 MGP_BALBcJ_G0002141.1 mouse_genomes_project 7 54842539 54844763 + TEC TEC MGP_BALBcJ_T0008925.1 MGP_BALBcJ_G0007200.1 mouse_genomes_project 7 79292017 79297835 - Gm45169 lincRNA lincRNA MGP_BALBcJ_T0005155.1 MGP_BALBcJ_G0004392.1 mouse_genomes_project 7 27488167 27489416 + 1110035H17Rik antisense pseudogene MGP_BALBcJ_T0005156.1 MGP_BALBcJ_G0004392.1 mouse_genomes_project 7 27488167 27489418 + 1110035H17Rik antisense antisense MGP_BALBcJ_T0083680.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44106752 44135857 + MGP_BALBcJ_P0083680 Vrk3 protein_coding protein_coding MGP_BALBcJ_T0083681.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44106824 44116439 + Vrk3 protein_coding retained_intron MGP_BALBcJ_T0083682.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44106923 44118103 + MGP_BALBcJ_P0083682 Vrk3 protein_coding protein_coding MGP_BALBcJ_T0083683.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44106975 44135857 + MGP_BALBcJ_P0083683 Vrk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083684.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44106985 44121388 + MGP_BALBcJ_P0083684 Vrk3 protein_coding protein_coding MGP_BALBcJ_T0083685.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44106986 44123136 + MGP_BALBcJ_P0083685 Vrk3 protein_coding protein_coding MGP_BALBcJ_T0083686.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44107276 44112290 + MGP_BALBcJ_P0083686 Vrk3 protein_coding protein_coding MGP_BALBcJ_T0083687.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44110446 44117741 + Vrk3 protein_coding processed_transcript MGP_BALBcJ_T0083688.1 MGP_BALBcJ_G0032168.1 mouse_genomes_project 7 44110448 44117741 + Vrk3 protein_coding processed_transcript MGP_BALBcJ_T0083905.1 MGP_BALBcJ_G0032226.1 mouse_genomes_project 7 45015291 45026781 + MGP_BALBcJ_P0083905 Rasip1 protein_coding protein_coding MGP_BALBcJ_T0005194.1 MGP_BALBcJ_G0004420.1 mouse_genomes_project 7 50081919 50134970 - Nell1os antisense antisense MGP_BALBcJ_T0005195.1 MGP_BALBcJ_G0004420.1 mouse_genomes_project 7 50106524 50135057 - Nell1os antisense antisense MGP_BALBcJ_T0005196.1 MGP_BALBcJ_G0004420.1 mouse_genomes_project 7 50121474 50132091 - Nell1os antisense antisense MGP_BALBcJ_T0087192.1 MGP_BALBcJ_G0033091.1 mouse_genomes_project 7 132154689 132166539 + MGP_BALBcJ_P0087192 Bub3 protein_coding protein_coding MGP_BALBcJ_T0085840.1 MGP_BALBcJ_G0032826.1 mouse_genomes_project 7 109371466 109422259 - MGP_BALBcJ_P0085840 Ric3 protein_coding protein_coding MGP_BALBcJ_T0085841.1 MGP_BALBcJ_G0032826.1 mouse_genomes_project 7 109371466 109398200 - MGP_BALBcJ_P0085841 Ric3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085842.1 MGP_BALBcJ_G0032826.1 mouse_genomes_project 7 109375102 109422250 - MGP_BALBcJ_P0085842 Ric3 protein_coding protein_coding MGP_BALBcJ_T0085843.1 MGP_BALBcJ_G0032826.1 mouse_genomes_project 7 109383321 109422239 - Ric3 protein_coding retained_intron MGP_BALBcJ_T0085844.1 MGP_BALBcJ_G0032826.1 mouse_genomes_project 7 109397862 109422250 - Ric3 protein_coding retained_intron MGP_BALBcJ_T0085845.1 MGP_BALBcJ_G0032826.1 mouse_genomes_project 7 109419671 109422233 - Ric3 protein_coding processed_transcript MGP_BALBcJ_T0101349.1 MGP_BALBcJ_G0039385.1 mouse_genomes_project 7 109858874 109859006 + Snora3 snoRNA snoRNA MGP_BALBcJ_T0082982.1 MGP_BALBcJ_G0032011.1 mouse_genomes_project 7 28941877 28946083 - MGP_BALBcJ_P0082982 Lin37 protein_coding protein_coding MGP_BALBcJ_T0082983.1 MGP_BALBcJ_G0032011.1 mouse_genomes_project 7 28941880 28942458 - Lin37 protein_coding retained_intron MGP_BALBcJ_T0082984.1 MGP_BALBcJ_G0032011.1 mouse_genomes_project 7 28941881 28946275 - MGP_BALBcJ_P0082984 Lin37 protein_coding protein_coding MGP_BALBcJ_T0082985.1 MGP_BALBcJ_G0032011.1 mouse_genomes_project 7 28942296 28946096 - MGP_BALBcJ_P0082985 Lin37 protein_coding protein_coding MGP_BALBcJ_T0082986.1 MGP_BALBcJ_G0032011.1 mouse_genomes_project 7 28943529 28946076 - Lin37 protein_coding processed_transcript MGP_BALBcJ_T0005178.1 MGP_BALBcJ_G0004410.1 mouse_genomes_project 7 34565261 34601892 + E130304I02Rik antisense antisense MGP_BALBcJ_T0005179.1 MGP_BALBcJ_G0004410.1 mouse_genomes_project 7 34565262 34565697 + E130304I02Rik antisense antisense MGP_BALBcJ_T0083670.1 MGP_BALBcJ_G0032164.1 mouse_genomes_project 7 43963338 44022777 - MGP_BALBcJ_P0083670 protein_coding protein_coding MGP_BALBcJ_T0102766.1 MGP_BALBcJ_G0040581.1 mouse_genomes_project 7 47680750 47681699 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084247.1 MGP_BALBcJ_G0032320.1 mouse_genomes_project 7 62025522 62028165 - MGP_BALBcJ_P0084247 Peg12 protein_coding protein_coding MGP_BALBcJ_T0084823.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81620197 81645705 + MGP_BALBcJ_P0084823 Tm6sf1 protein_coding protein_coding MGP_BALBcJ_T0084824.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81620216 81635941 + Tm6sf1 protein_coding retained_intron MGP_BALBcJ_T0084825.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81620314 81626599 + Tm6sf1 protein_coding processed_transcript MGP_BALBcJ_T0084826.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81620347 81646068 + MGP_BALBcJ_P0084826 Tm6sf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084827.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81620645 81639991 + MGP_BALBcJ_P0084827 Tm6sf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0084828.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81623889 81645049 + MGP_BALBcJ_P0084828 Tm6sf1 protein_coding protein_coding MGP_BALBcJ_T0084829.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81631796 81634479 + Tm6sf1 protein_coding retained_intron MGP_BALBcJ_T0084830.1 MGP_BALBcJ_G0032429.1 mouse_genomes_project 7 81635556 81645037 + Tm6sf1 protein_coding retained_intron MGP_BALBcJ_T0102738.1 MGP_BALBcJ_G0040553.1 mouse_genomes_project 7 40817424 40817664 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083989.1 MGP_BALBcJ_G0032249.1 mouse_genomes_project 7 45437063 45487492 + MGP_BALBcJ_P0083989 Nomo1 protein_coding protein_coding MGP_BALBcJ_T0083990.1 MGP_BALBcJ_G0032249.1 mouse_genomes_project 7 45453417 45454198 + Nomo1 protein_coding retained_intron MGP_BALBcJ_T0083991.1 MGP_BALBcJ_G0032249.1 mouse_genomes_project 7 45457520 45460544 + Nomo1 protein_coding retained_intron MGP_BALBcJ_T0083992.1 MGP_BALBcJ_G0032249.1 mouse_genomes_project 7 45461816 45464572 + Nomo1 protein_coding retained_intron MGP_BALBcJ_T0083993.1 MGP_BALBcJ_G0032249.1 mouse_genomes_project 7 45485924 45487084 + Nomo1 protein_coding retained_intron MGP_BALBcJ_T0081993.1 MGP_BALBcJ_G0031750.1 mouse_genomes_project 7 17128415 17141993 + MGP_BALBcJ_P0081993 Rtn2 protein_coding protein_coding MGP_BALBcJ_T0081994.1 MGP_BALBcJ_G0031750.1 mouse_genomes_project 7 17136937 17141988 + MGP_BALBcJ_P0081994 Rtn2 protein_coding protein_coding MGP_BALBcJ_T0015710.1 MGP_BALBcJ_G0013807.1 mouse_genomes_project 7 14737544 14738843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100087.1 MGP_BALBcJ_G0038123.1 mouse_genomes_project 7 109415063 109415170 - Gm25450 snRNA snRNA MGP_BALBcJ_T0100072.1 MGP_BALBcJ_G0038108.1 mouse_genomes_project 7 73275719 73275824 - Gm26176 snRNA snRNA MGP_BALBcJ_T0087341.1 MGP_BALBcJ_G0033129.1 mouse_genomes_project 7 139768300 139785534 + MGP_BALBcJ_P0087341 Dpysl4 protein_coding protein_coding MGP_BALBcJ_T0087342.1 MGP_BALBcJ_G0033129.1 mouse_genomes_project 7 139768301 139776765 + Dpysl4 protein_coding processed_transcript MGP_BALBcJ_T0087343.1 MGP_BALBcJ_G0033129.1 mouse_genomes_project 7 139768326 139784624 + Dpysl4 protein_coding retained_intron MGP_BALBcJ_T0087344.1 MGP_BALBcJ_G0033129.1 mouse_genomes_project 7 139768327 139784612 + Dpysl4 protein_coding retained_intron MGP_BALBcJ_T0087345.1 MGP_BALBcJ_G0033129.1 mouse_genomes_project 7 139770664 139776731 + MGP_BALBcJ_P0087345 Dpysl4 protein_coding protein_coding MGP_BALBcJ_T0087346.1 MGP_BALBcJ_G0033129.1 mouse_genomes_project 7 139771546 139784606 + MGP_BALBcJ_P0087346 Dpysl4 protein_coding protein_coding MGP_BALBcJ_T0086876.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128105505 128112908 - MGP_BALBcJ_P0086876 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086877.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128105505 128113747 - MGP_BALBcJ_P0086877 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086878.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128105505 128113690 - MGP_BALBcJ_P0086878 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086879.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128106929 128113342 - MGP_BALBcJ_P0086879 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086880.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128107061 128113733 - MGP_BALBcJ_P0086880 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086881.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128107230 128114272 - MGP_BALBcJ_P0086881 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086882.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128110378 128112835 - MGP_BALBcJ_P0086882 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086883.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128110458 128113675 - MGP_BALBcJ_P0086883 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086884.1 MGP_BALBcJ_G0033031.1 mouse_genomes_project 7 128110525 128112840 - MGP_BALBcJ_P0086884 Zfp629 protein_coding protein_coding MGP_BALBcJ_T0086239.1 MGP_BALBcJ_G0032913.1 mouse_genomes_project 7 120645788 120655608 + MGP_BALBcJ_P0086239 Anks4b protein_coding protein_coding MGP_BALBcJ_T0085440.1 MGP_BALBcJ_G0032590.1 mouse_genomes_project 7 102155387 102160775 - MGP_BALBcJ_P0085440 Chrna10 protein_coding protein_coding MGP_BALBcJ_T0009037.1 MGP_BALBcJ_G0007269.1 mouse_genomes_project 7 140653867 140654902 - Gm2044 lincRNA lincRNA MGP_BALBcJ_T0002284.1 MGP_BALBcJ_G0002195.1 mouse_genomes_project 7 116854798 116855755 - TEC TEC MGP_BALBcJ_T0009009.1 MGP_BALBcJ_G0007249.1 mouse_genomes_project 7 127560973 127563557 + Gm44939 lincRNA lincRNA MGP_BALBcJ_T0084843.1 MGP_BALBcJ_G0032433.1 mouse_genomes_project 7 82086273 82090604 + Adamtsl3 protein_coding processed_transcript MGP_BALBcJ_T0084844.1 MGP_BALBcJ_G0032433.1 mouse_genomes_project 7 82086311 82366206 + MGP_BALBcJ_P0084844 Adamtsl3 protein_coding protein_coding MGP_BALBcJ_T0084845.1 MGP_BALBcJ_G0032433.1 mouse_genomes_project 7 82087796 82364181 + MGP_BALBcJ_P0084845 Adamtsl3 protein_coding protein_coding MGP_BALBcJ_T0084846.1 MGP_BALBcJ_G0032433.1 mouse_genomes_project 7 82160792 82218667 + Adamtsl3 protein_coding retained_intron MGP_BALBcJ_T0084847.1 MGP_BALBcJ_G0032433.1 mouse_genomes_project 7 82363527 82364532 + MGP_BALBcJ_P0084847 Adamtsl3 protein_coding protein_coding MGP_BALBcJ_T0005217.1 MGP_BALBcJ_G0004436.1 mouse_genomes_project 7 79803815 79805275 - Gm44949 antisense antisense MGP_BALBcJ_T0087766.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143225526 143259542 + MGP_BALBcJ_P0087766 Lsp1 protein_coding protein_coding MGP_BALBcJ_T0087767.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143225563 143259542 + MGP_BALBcJ_P0087767 Lsp1 protein_coding protein_coding MGP_BALBcJ_T0087768.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143225581 143259278 + MGP_BALBcJ_P0087768 Lsp1 protein_coding protein_coding MGP_BALBcJ_T0087769.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143236519 143259274 + MGP_BALBcJ_P0087769 Lsp1 protein_coding protein_coding MGP_BALBcJ_T0087770.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143236548 143253043 + Lsp1 protein_coding retained_intron MGP_BALBcJ_T0087771.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143236827 143259275 + MGP_BALBcJ_P0087771 Lsp1 protein_coding protein_coding MGP_BALBcJ_T0087772.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143239670 143251176 + Lsp1 protein_coding processed_transcript MGP_BALBcJ_T0087773.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143241686 143259542 + Lsp1 protein_coding processed_transcript MGP_BALBcJ_T0087774.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143247915 143254655 + Lsp1 protein_coding processed_transcript MGP_BALBcJ_T0087775.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143248060 143251152 + Lsp1 protein_coding processed_transcript MGP_BALBcJ_T0087776.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143253688 143255097 + Lsp1 protein_coding retained_intron MGP_BALBcJ_T0087777.1 MGP_BALBcJ_G0033241.1 mouse_genomes_project 7 143254484 143259192 + Lsp1 protein_coding retained_intron MGP_BALBcJ_T0009024.1 MGP_BALBcJ_G0007261.1 mouse_genomes_project 7 131046862 131050126 + lincRNA lincRNA MGP_BALBcJ_T0015807.1 MGP_BALBcJ_G0013904.1 mouse_genomes_project 7 72346718 72347706 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008838.1 MGP_BALBcJ_G0007137.1 mouse_genomes_project 7 39317133 39413156 - Gm28807 lincRNA lincRNA MGP_BALBcJ_T0083446.1 MGP_BALBcJ_G0032102.1 mouse_genomes_project 7 41239225 41287382 - MGP_BALBcJ_P0083446 Vmn2r59 protein_coding protein_coding MGP_BALBcJ_T0086443.1 MGP_BALBcJ_G0032960.1 mouse_genomes_project 7 126347545 126549779 - MGP_BALBcJ_P0086443 Gsg1l protein_coding protein_coding MGP_BALBcJ_T0084969.1 MGP_BALBcJ_G0032486.1 mouse_genomes_project 7 89781980 89808215 - MGP_BALBcJ_P0084969 Eed protein_coding protein_coding MGP_BALBcJ_T0084970.1 MGP_BALBcJ_G0032486.1 mouse_genomes_project 7 89803986 89807791 - Eed protein_coding processed_transcript MGP_BALBcJ_T0085781.1 MGP_BALBcJ_G0032778.1 mouse_genomes_project 7 107424159 107425107 - MGP_BALBcJ_P0085781 protein_coding protein_coding MGP_BALBcJ_T0085797.1 MGP_BALBcJ_G0032787.1 mouse_genomes_project 7 108066105 108087135 - MGP_BALBcJ_P0085797 Ovch2 protein_coding protein_coding MGP_BALBcJ_T0082749.1 MGP_BALBcJ_G0031954.1 mouse_genomes_project 7 27293880 27317808 + MGP_BALBcJ_P0082749 Map4k1 protein_coding protein_coding MGP_BALBcJ_T0082750.1 MGP_BALBcJ_G0031954.1 mouse_genomes_project 7 27293982 27317803 + MGP_BALBcJ_P0082750 Map4k1 protein_coding unknown_likely_coding MGP_BALBcJ_T0005173.1 MGP_BALBcJ_G0004405.1 mouse_genomes_project 7 33121090 33127205 + Gm12764 antisense antisense MGP_BALBcJ_T0102684.1 MGP_BALBcJ_G0040499.1 mouse_genomes_project 7 9294726 9295014 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002212.1 MGP_BALBcJ_G0002124.1 mouse_genomes_project 7 38491676 38494031 - TEC TEC MGP_BALBcJ_T0008819.1 MGP_BALBcJ_G0007123.1 mouse_genomes_project 7 34602078 34603390 + Gm28514 lincRNA lincRNA MGP_BALBcJ_T0015848.1 MGP_BALBcJ_G0013945.1 mouse_genomes_project 7 98358516 98358830 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082060.1 MGP_BALBcJ_G0031769.1 mouse_genomes_project 7 17487607 17521464 - MGP_BALBcJ_P0082060 Clptm1 protein_coding protein_coding MGP_BALBcJ_T0102774.1 MGP_BALBcJ_G0040589.1 mouse_genomes_project 7 48243402 48244396 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102706.1 MGP_BALBcJ_G0040521.1 mouse_genomes_project 7 12253573 12253867 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002270.1 MGP_BALBcJ_G0002181.1 mouse_genomes_project 7 79214988 79216027 + TEC TEC MGP_BALBcJ_T0008955.1 MGP_BALBcJ_G0007219.1 mouse_genomes_project 7 99562485 99565683 + Gm10605 lincRNA lincRNA MGP_BALBcJ_T0008956.1 MGP_BALBcJ_G0007219.1 mouse_genomes_project 7 99562688 99568257 + Gm10605 lincRNA lincRNA MGP_BALBcJ_T0086154.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119202172 119302384 + MGP_BALBcJ_P0086154 9030624J02Rik protein_coding protein_coding MGP_BALBcJ_T0086155.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119202670 119244074 + 9030624J02Rik protein_coding processed_transcript MGP_BALBcJ_T0086156.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119202685 119300907 + MGP_BALBcJ_P0086156 9030624J02Rik protein_coding protein_coding MGP_BALBcJ_T0086157.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119202685 119300897 + MGP_BALBcJ_P0086157 9030624J02Rik protein_coding protein_coding MGP_BALBcJ_T0086158.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119202685 119222109 + MGP_BALBcJ_P0086158 9030624J02Rik protein_coding protein_coding MGP_BALBcJ_T0086159.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119202687 119208327 + 9030624J02Rik protein_coding retained_intron MGP_BALBcJ_T0086160.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119208558 119226397 + 9030624J02Rik protein_coding retained_intron MGP_BALBcJ_T0086161.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119212772 119214329 + 9030624J02Rik protein_coding retained_intron MGP_BALBcJ_T0086162.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119224075 119300905 + MGP_BALBcJ_P0086162 9030624J02Rik protein_coding protein_coding MGP_BALBcJ_T0086163.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119254815 119285634 + MGP_BALBcJ_P0086163 9030624J02Rik protein_coding protein_coding MGP_BALBcJ_T0086164.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119264495 119293404 + 9030624J02Rik protein_coding retained_intron MGP_BALBcJ_T0086165.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119266352 119273018 + 9030624J02Rik protein_coding retained_intron MGP_BALBcJ_T0086166.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119281208 119285858 + 9030624J02Rik protein_coding retained_intron MGP_BALBcJ_T0086167.1 MGP_BALBcJ_G0032892.1 mouse_genomes_project 7 119284001 119300717 + 9030624J02Rik protein_coding processed_transcript MGP_BALBcJ_T0086952.1 MGP_BALBcJ_G0033046.1 mouse_genomes_project 7 128390206 128392761 - MGP_BALBcJ_P0086952 Vkorc1 protein_coding protein_coding MGP_BALBcJ_T0086953.1 MGP_BALBcJ_G0033046.1 mouse_genomes_project 7 128390208 128392395 - MGP_BALBcJ_P0086953 Vkorc1 protein_coding protein_coding MGP_BALBcJ_T0086954.1 MGP_BALBcJ_G0033046.1 mouse_genomes_project 7 128390381 128392453 - MGP_BALBcJ_P0086954 Vkorc1 protein_coding protein_coding MGP_BALBcJ_T0005118.1 MGP_BALBcJ_G0004367.1 mouse_genomes_project 7 1099664 1112779 - D030047H15Rik antisense antisense MGP_BALBcJ_T0084122.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49360227 49444538 + MGP_BALBcJ_P0084122 Prmt3 protein_coding protein_coding MGP_BALBcJ_T0084123.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49360227 49364372 + MGP_BALBcJ_P0084123 Prmt3 protein_coding protein_coding MGP_BALBcJ_T0084124.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49360318 49364029 + Prmt3 protein_coding processed_transcript MGP_BALBcJ_T0084125.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49360318 49411956 + MGP_BALBcJ_P0084125 Prmt3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084126.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49360320 49362502 + Prmt3 protein_coding processed_transcript MGP_BALBcJ_T0084127.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49360425 49369181 + Prmt3 protein_coding processed_transcript MGP_BALBcJ_T0084128.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49361742 49369211 + MGP_BALBcJ_P0084128 Prmt3 protein_coding protein_coding MGP_BALBcJ_T0084129.1 MGP_BALBcJ_G0032291.1 mouse_genomes_project 7 49382483 49412152 + MGP_BALBcJ_P0084129 Prmt3 protein_coding protein_coding MGP_BALBcJ_T0100045.1 MGP_BALBcJ_G0038081.1 mouse_genomes_project 7 1075532 1075703 + Gm23741 snRNA snRNA MGP_BALBcJ_T0081414.1 MGP_BALBcJ_G0031537.1 mouse_genomes_project 7 1666245 1691626 + MGP_BALBcJ_P0081414 Brsk1 protein_coding protein_coding MGP_BALBcJ_T0081415.1 MGP_BALBcJ_G0031537.1 mouse_genomes_project 7 1666569 1691642 + MGP_BALBcJ_P0081415 Brsk1 protein_coding protein_coding MGP_BALBcJ_T0081416.1 MGP_BALBcJ_G0031537.1 mouse_genomes_project 7 1666721 1681108 + MGP_BALBcJ_P0081416 Brsk1 protein_coding protein_coding MGP_BALBcJ_T0081417.1 MGP_BALBcJ_G0031537.1 mouse_genomes_project 7 1667882 1681108 + MGP_BALBcJ_P0081417 Brsk1 protein_coding protein_coding MGP_BALBcJ_T0081419.1 MGP_BALBcJ_G0031537.1 mouse_genomes_project 7 1684667 1686630 + MGP_BALBcJ_P0081419 Brsk1 protein_coding protein_coding MGP_BALBcJ_T0085634.1 MGP_BALBcJ_G0032720.1 mouse_genomes_project 7 105020700 105021639 - MGP_BALBcJ_P0085634 Olfr670 protein_coding protein_coding MGP_BALBcJ_T0010905.1 MGP_BALBcJ_G0009030.1 mouse_genomes_project 7 128798186 128798253 - Mir3103 miRNA miRNA MGP_BALBcJ_T0085763.1 MGP_BALBcJ_G0032761.1 mouse_genomes_project 7 107125274 107126225 - MGP_BALBcJ_P0085763 Olfr700 protein_coding protein_coding MGP_BALBcJ_T0083460.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590095 42598223 + Siglecf protein_coding retained_intron MGP_BALBcJ_T0083461.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590095 42598225 + MGP_BALBcJ_P0083461 Siglecf protein_coding protein_coding MGP_BALBcJ_T0083462.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590137 42590598 + Siglecf protein_coding processed_transcript MGP_BALBcJ_T0083463.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590162 42598286 + MGP_BALBcJ_P0083463 Siglecf protein_coding protein_coding MGP_BALBcJ_T0083464.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590276 42598044 + MGP_BALBcJ_P0083464 Siglecf protein_coding protein_coding MGP_BALBcJ_T0083465.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590302 42597529 + MGP_BALBcJ_P0083465 Siglecf protein_coding unknown_likely_coding MGP_BALBcJ_T0083466.1 MGP_BALBcJ_G0032108.1 mouse_genomes_project 7 42590302 42595373 + MGP_BALBcJ_P0083466 Siglecf protein_coding protein_coding MGP_BALBcJ_T0101359.1 MGP_BALBcJ_G0039395.1 mouse_genomes_project 7 119768631 119768757 - Gm23321 snoRNA snoRNA MGP_BALBcJ_T0081897.1 MGP_BALBcJ_G0031722.1 mouse_genomes_project 7 16526972 16531515 + protein_coding processed_transcript MGP_BALBcJ_T0081898.1 MGP_BALBcJ_G0031722.1 mouse_genomes_project 7 16526982 16538344 + MGP_BALBcJ_P0081898 protein_coding protein_coding MGP_BALBcJ_T0081899.1 MGP_BALBcJ_G0031722.1 mouse_genomes_project 7 16526982 16538514 + MGP_BALBcJ_P0081899 protein_coding protein_coding MGP_BALBcJ_T0085847.1 MGP_BALBcJ_G0032828.1 mouse_genomes_project 7 109616357 109776182 - Stk33 protein_coding processed_transcript MGP_BALBcJ_T0085848.1 MGP_BALBcJ_G0032828.1 mouse_genomes_project 7 109616357 109776177 - MGP_BALBcJ_P0085848 Stk33 protein_coding protein_coding MGP_BALBcJ_T0085849.1 MGP_BALBcJ_G0032828.1 mouse_genomes_project 7 109616357 109775918 - MGP_BALBcJ_P0085849 Stk33 protein_coding protein_coding MGP_BALBcJ_T0085850.1 MGP_BALBcJ_G0032828.1 mouse_genomes_project 7 109616357 109776182 - MGP_BALBcJ_P0085850 Stk33 protein_coding protein_coding MGP_BALBcJ_T0085851.1 MGP_BALBcJ_G0032828.1 mouse_genomes_project 7 109616729 109776099 - MGP_BALBcJ_P0085851 Stk33 protein_coding protein_coding MGP_BALBcJ_T0082532.1 MGP_BALBcJ_G0031895.1 mouse_genomes_project 7 25688532 25707179 + MGP_BALBcJ_P0082532 Blvrb protein_coding protein_coding MGP_BALBcJ_T0082533.1 MGP_BALBcJ_G0031895.1 mouse_genomes_project 7 25688554 25700942 + MGP_BALBcJ_P0082533 Blvrb protein_coding protein_coding MGP_BALBcJ_T0082534.1 MGP_BALBcJ_G0031895.1 mouse_genomes_project 7 25688618 25707145 + MGP_BALBcJ_P0082534 Blvrb protein_coding protein_coding MGP_BALBcJ_T0082535.1 MGP_BALBcJ_G0031895.1 mouse_genomes_project 7 25693132 25703877 + Blvrb protein_coding processed_transcript MGP_BALBcJ_T0008915.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79204674 79236138 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0008916.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79204686 79236343 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0008917.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79204765 79239238 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0008918.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79204769 79236228 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0008919.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79219865 79237426 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0008920.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79220068 79236094 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0008921.1 MGP_BALBcJ_G0007197.1 mouse_genomes_project 7 79232481 79236879 + Mir9-3hg lincRNA lincRNA MGP_BALBcJ_T0087349.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139889946 139895149 + MGP_BALBcJ_P0087349 Lrrc27 protein_coding protein_coding MGP_BALBcJ_T0087350.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139890207 139906484 + MGP_BALBcJ_P0087350 Lrrc27 protein_coding protein_coding MGP_BALBcJ_T0087351.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139890216 139920554 + MGP_BALBcJ_P0087351 Lrrc27 protein_coding unknown_likely_coding MGP_BALBcJ_T0087352.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139891564 139898368 + MGP_BALBcJ_P0087352 Lrrc27 protein_coding protein_coding MGP_BALBcJ_T0087353.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139897457 139903623 + Lrrc27 protein_coding processed_transcript MGP_BALBcJ_T0087354.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139897883 139903716 + Lrrc27 protein_coding retained_intron MGP_BALBcJ_T0087355.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139911362 139920748 + Lrrc27 protein_coding processed_transcript MGP_BALBcJ_T0087356.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139913635 139920749 + Lrrc27 protein_coding processed_transcript MGP_BALBcJ_T0087357.1 MGP_BALBcJ_G0033131.1 mouse_genomes_project 7 139916190 139920753 + Lrrc27 protein_coding processed_transcript MGP_BALBcJ_T0102755.1 MGP_BALBcJ_G0040570.1 mouse_genomes_project 7 46840598 46841053 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085527.1 MGP_BALBcJ_G0032646.1 mouse_genomes_project 7 103593517 103594477 + MGP_BALBcJ_P0085527 Olfr606 protein_coding protein_coding MGP_BALBcJ_T0087965.1 MGP_BALBcJ_G0033279.1 mouse_genomes_project 7 146051104 146081829 - MGP_BALBcJ_P0087965 Tpcn2 protein_coding protein_coding MGP_BALBcJ_T0081733.1 MGP_BALBcJ_G0031671.1 mouse_genomes_project 7 13444622 13447623 + MGP_BALBcJ_P0081733 protein_coding protein_coding MGP_BALBcJ_T0082123.1 MGP_BALBcJ_G0031791.1 mouse_genomes_project 7 21546878 21547828 + MGP_BALBcJ_P0082123 protein_coding protein_coding MGP_BALBcJ_T0085804.1 MGP_BALBcJ_G0032794.1 mouse_genomes_project 7 108333791 108335328 - MGP_BALBcJ_P0085804 Olfr478 protein_coding protein_coding MGP_BALBcJ_T0081800.1 MGP_BALBcJ_G0031690.1 mouse_genomes_project 7 14035907 14056674 - MGP_BALBcJ_P0081800 Npas1 protein_coding protein_coding MGP_BALBcJ_T0087308.1 MGP_BALBcJ_G0033120.1 mouse_genomes_project 7 137588852 137823448 + MGP_BALBcJ_P0087308 Mgmt protein_coding protein_coding MGP_BALBcJ_T0085806.1 MGP_BALBcJ_G0032796.1 mouse_genomes_project 7 108370020 108371049 - MGP_BALBcJ_P0085806 Olfr480 protein_coding protein_coding MGP_BALBcJ_T0087010.1 MGP_BALBcJ_G0033057.1 mouse_genomes_project 7 128659699 128714420 + MGP_BALBcJ_P0087010 protein_coding protein_coding MGP_BALBcJ_T0087011.1 MGP_BALBcJ_G0033057.1 mouse_genomes_project 7 128680624 128714423 + MGP_BALBcJ_P0087011 protein_coding protein_coding MGP_BALBcJ_T0087012.1 MGP_BALBcJ_G0033057.1 mouse_genomes_project 7 128680633 128714420 + MGP_BALBcJ_P0087012 protein_coding protein_coding MGP_BALBcJ_T0087013.1 MGP_BALBcJ_G0033057.1 mouse_genomes_project 7 128712541 128714423 + MGP_BALBcJ_P0087013 protein_coding protein_coding MGP_BALBcJ_T0087014.1 MGP_BALBcJ_G0033057.1 mouse_genomes_project 7 128712790 128732696 + MGP_BALBcJ_P0087014 protein_coding protein_coding MGP_BALBcJ_T0085754.1 MGP_BALBcJ_G0032753.1 mouse_genomes_project 7 106044285 106729854 - MGP_BALBcJ_P0085754 protein_coding protein_coding MGP_BALBcJ_T0085755.1 MGP_BALBcJ_G0032753.1 mouse_genomes_project 7 106421984 106830515 - protein_coding processed_transcript MGP_BALBcJ_T0085521.1 MGP_BALBcJ_G0032640.1 mouse_genomes_project 7 103477193 103478138 - MGP_BALBcJ_P0085521 Olfr600 protein_coding protein_coding MGP_BALBcJ_T0002269.1 MGP_BALBcJ_G0002180.1 mouse_genomes_project 7 79171136 79174282 + TEC TEC MGP_BALBcJ_T0087465.1 MGP_BALBcJ_G0033177.1 mouse_genomes_project 7 141558650 141561864 + MGP_BALBcJ_P0087465 Odf3 protein_coding protein_coding MGP_BALBcJ_T0087466.1 MGP_BALBcJ_G0033177.1 mouse_genomes_project 7 141558668 141561854 + MGP_BALBcJ_P0087466 Odf3 protein_coding protein_coding MGP_BALBcJ_T0087467.1 MGP_BALBcJ_G0033177.1 mouse_genomes_project 7 141558669 141561857 + Odf3 protein_coding retained_intron MGP_BALBcJ_T0085644.1 MGP_BALBcJ_G0032730.1 mouse_genomes_project 7 105411064 105424314 + MGP_BALBcJ_P0085644 Olfr688 protein_coding protein_coding MGP_BALBcJ_T0081524.1 MGP_BALBcJ_G0031579.1 mouse_genomes_project 7 3302379 3329306 + MGP_BALBcJ_P0081524 Zscan5b protein_coding protein_coding MGP_BALBcJ_T0081525.1 MGP_BALBcJ_G0031579.1 mouse_genomes_project 7 3302396 3313834 + MGP_BALBcJ_P0081525 Zscan5b protein_coding protein_coding MGP_BALBcJ_T0081526.1 MGP_BALBcJ_G0031579.1 mouse_genomes_project 7 3312608 3329073 + MGP_BALBcJ_P0081526 Zscan5b protein_coding protein_coding MGP_BALBcJ_T0085289.1 MGP_BALBcJ_G0032561.1 mouse_genomes_project 7 100731986 100817056 + MGP_BALBcJ_P0085289 Fam168a protein_coding protein_coding MGP_BALBcJ_T0081593.1 MGP_BALBcJ_G0031620.1 mouse_genomes_project 7 9611710 9612631 - MGP_BALBcJ_P0081593 Vmn1r81 protein_coding protein_coding MGP_BALBcJ_T0015697.1 MGP_BALBcJ_G0013794.1 mouse_genomes_project 7 11356051 11371193 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008813.1 MGP_BALBcJ_G0007117.1 mouse_genomes_project 7 33368759 33369476 - Gm44837 lincRNA lincRNA MGP_BALBcJ_T0002300.1 MGP_BALBcJ_G0002211.1 mouse_genomes_project 7 126529733 126531275 - TEC TEC MGP_BALBcJ_T0082043.1 MGP_BALBcJ_G0031765.1 mouse_genomes_project 7 17419896 17428904 - MGP_BALBcJ_P0082043 Gemin7 protein_coding protein_coding MGP_BALBcJ_T0082044.1 MGP_BALBcJ_G0031765.1 mouse_genomes_project 7 17419899 17428424 - MGP_BALBcJ_P0082044 Gemin7 protein_coding protein_coding MGP_BALBcJ_T0082045.1 MGP_BALBcJ_G0031765.1 mouse_genomes_project 7 17420037 17428049 - MGP_BALBcJ_P0082045 Gemin7 protein_coding protein_coding MGP_BALBcJ_T0082046.1 MGP_BALBcJ_G0031765.1 mouse_genomes_project 7 17420069 17428170 - MGP_BALBcJ_P0082046 Gemin7 protein_coding protein_coding MGP_BALBcJ_T0082047.1 MGP_BALBcJ_G0031765.1 mouse_genomes_project 7 17420196 17428466 - MGP_BALBcJ_P0082047 Gemin7 protein_coding protein_coding MGP_BALBcJ_T0082048.1 MGP_BALBcJ_G0031765.1 mouse_genomes_project 7 17420374 17428255 - MGP_BALBcJ_P0082048 Gemin7 protein_coding protein_coding MGP_BALBcJ_T0005219.1 MGP_BALBcJ_G0004438.1 mouse_genomes_project 7 80361149 80369475 + Gm15880 antisense antisense MGP_BALBcJ_T0086595.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127245864 127251109 + MGP_BALBcJ_P0086595 Mapk3 protein_coding protein_coding MGP_BALBcJ_T0086596.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127245909 127252082 + MGP_BALBcJ_P0086596 Mapk3 protein_coding protein_coding MGP_BALBcJ_T0086597.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127245914 127251108 + MGP_BALBcJ_P0086597 Mapk3 protein_coding protein_coding MGP_BALBcJ_T0086598.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127245923 127247271 + Mapk3 protein_coding retained_intron MGP_BALBcJ_T0086599.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127246097 127249423 + Mapk3 protein_coding processed_transcript MGP_BALBcJ_T0086600.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127247012 127250836 + MGP_BALBcJ_P0086600 Mapk3 protein_coding protein_coding MGP_BALBcJ_T0086601.1 MGP_BALBcJ_G0032983.1 mouse_genomes_project 7 127249540 127250624 + Mapk3 protein_coding retained_intron MGP_BALBcJ_T0002311.1 MGP_BALBcJ_G0002222.1 mouse_genomes_project 7 129061838 129062448 + TEC TEC MGP_BALBcJ_T0086654.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127336753 127338863 + MGP_BALBcJ_P0086654 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086655.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127336890 127342043 + MGP_BALBcJ_P0086655 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086656.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127336975 127338090 + Doc2a protein_coding processed_transcript MGP_BALBcJ_T0086657.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127337035 127338030 + MGP_BALBcJ_P0086657 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086658.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127337063 127340677 + MGP_BALBcJ_P0086658 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086659.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127337264 127338174 + MGP_BALBcJ_P0086659 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086660.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127337299 127338173 + MGP_BALBcJ_P0086660 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086661.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127337592 127339098 + MGP_BALBcJ_P0086661 Doc2a protein_coding protein_coding MGP_BALBcJ_T0086662.1 MGP_BALBcJ_G0032991.1 mouse_genomes_project 7 127338134 127341374 + MGP_BALBcJ_P0086662 Doc2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083698.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44204222 44212228 - Tbc1d17 protein_coding retained_intron MGP_BALBcJ_T0083699.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44204341 44212392 - MGP_BALBcJ_P0083699 Tbc1d17 protein_coding protein_coding MGP_BALBcJ_T0083700.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44204349 44212396 - MGP_BALBcJ_P0083700 Tbc1d17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083701.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44204350 44212207 - Tbc1d17 protein_coding retained_intron MGP_BALBcJ_T0083702.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44206696 44207641 - Tbc1d17 protein_coding retained_intron MGP_BALBcJ_T0083703.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44207893 44209317 - Tbc1d17 protein_coding retained_intron MGP_BALBcJ_T0083704.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44211342 44212212 - Tbc1d17 protein_coding retained_intron MGP_BALBcJ_T0083705.1 MGP_BALBcJ_G0032171.1 mouse_genomes_project 7 44211591 44211911 - Tbc1d17 protein_coding retained_intron MGP_BALBcJ_T0085643.1 MGP_BALBcJ_G0032729.1 mouse_genomes_project 7 105346075 105347093 - MGP_BALBcJ_P0085643 Olfr686 protein_coding protein_coding MGP_BALBcJ_T0101761.1 MGP_BALBcJ_G0039716.1 mouse_genomes_project 7 68220792 68222346 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101762.1 MGP_BALBcJ_G0039716.1 mouse_genomes_project 7 68221174 68221894 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0085443.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102267383 102280749 + Pgap2 protein_coding processed_transcript MGP_BALBcJ_T0085444.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102267510 102283848 + MGP_BALBcJ_P0085444 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085445.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102267534 102296883 + MGP_BALBcJ_P0085445 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085446.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102267544 102283908 + MGP_BALBcJ_P0085446 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085447.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102267696 102278391 + Pgap2 protein_coding processed_transcript MGP_BALBcJ_T0085448.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102267707 102294778 + Pgap2 protein_coding retained_intron MGP_BALBcJ_T0085449.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102279705 102294484 + MGP_BALBcJ_P0085449 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085450.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102279909 102295545 + MGP_BALBcJ_P0085450 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085451.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280293 102296883 + MGP_BALBcJ_P0085451 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085452.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280310 102295543 + MGP_BALBcJ_P0085452 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085453.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280315 102296093 + MGP_BALBcJ_P0085453 Pgap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085454.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280318 102294550 + MGP_BALBcJ_P0085454 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085455.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280334 102296079 + MGP_BALBcJ_P0085455 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085456.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280336 102284574 + Pgap2 protein_coding retained_intron MGP_BALBcJ_T0085457.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280337 102295979 + Pgap2 protein_coding processed_transcript MGP_BALBcJ_T0085458.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280340 102283817 + MGP_BALBcJ_P0085458 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085459.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280343 102294735 + Pgap2 protein_coding retained_intron MGP_BALBcJ_T0085460.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280349 102295937 + MGP_BALBcJ_P0085460 Pgap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085461.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280350 102296050 + MGP_BALBcJ_P0085461 Pgap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085462.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280358 102296876 + Pgap2 protein_coding processed_transcript MGP_BALBcJ_T0085463.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102280547 102294615 + MGP_BALBcJ_P0085463 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085464.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102283280 102294652 + MGP_BALBcJ_P0085464 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085465.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102283293 102295869 + MGP_BALBcJ_P0085465 Pgap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085466.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102288168 102296876 + MGP_BALBcJ_P0085466 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085467.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102294170 102295847 + MGP_BALBcJ_P0085467 Pgap2 protein_coding protein_coding MGP_BALBcJ_T0085468.1 MGP_BALBcJ_G0032592.1 mouse_genomes_project 7 102294219 102295971 + Pgap2 protein_coding retained_intron MGP_BALBcJ_T0082669.1 MGP_BALBcJ_G0031936.1 mouse_genomes_project 7 26830131 26831457 + MGP_BALBcJ_P0082669 Sycn protein_coding protein_coding MGP_BALBcJ_T0015789.1 MGP_BALBcJ_G0013886.1 mouse_genomes_project 7 55779534 55780426 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015878.1 MGP_BALBcJ_G0013975.1 mouse_genomes_project 7 122745723 122746447 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087015.1 MGP_BALBcJ_G0033058.1 mouse_genomes_project 7 128714353 128715306 - MGP_BALBcJ_P0087015 Cox6a2 protein_coding protein_coding MGP_BALBcJ_T0082645.1 MGP_BALBcJ_G0031928.1 mouse_genomes_project 7 26668206 26674769 - MGP_BALBcJ_P0082645 Med29 protein_coding protein_coding MGP_BALBcJ_T0084986.1 MGP_BALBcJ_G0032492.1 mouse_genomes_project 7 90275181 90278557 + MGP_BALBcJ_P0084986 Crebzf protein_coding protein_coding MGP_BALBcJ_T0084987.1 MGP_BALBcJ_G0032492.1 mouse_genomes_project 7 90275233 90280170 + MGP_BALBcJ_P0084987 Crebzf protein_coding protein_coding MGP_BALBcJ_T0084988.1 MGP_BALBcJ_G0032492.1 mouse_genomes_project 7 90276122 90277154 + Crebzf protein_coding processed_transcript MGP_BALBcJ_T0084989.1 MGP_BALBcJ_G0032492.1 mouse_genomes_project 7 90276122 90276829 + MGP_BALBcJ_P0084989 Crebzf protein_coding protein_coding MGP_BALBcJ_T0084990.1 MGP_BALBcJ_G0032492.1 mouse_genomes_project 7 90276294 90278443 + Crebzf protein_coding processed_transcript MGP_BALBcJ_T0084991.1 MGP_BALBcJ_G0032492.1 mouse_genomes_project 7 90277155 90278548 + Crebzf protein_coding processed_transcript MGP_BALBcJ_T0082629.1 MGP_BALBcJ_G0031924.1 mouse_genomes_project 7 26596619 26620707 - MGP_BALBcJ_P0082629 Supt5 protein_coding unknown_likely_coding MGP_BALBcJ_T0082630.1 MGP_BALBcJ_G0031924.1 mouse_genomes_project 7 26596628 26620662 - MGP_BALBcJ_P0082630 Supt5 protein_coding protein_coding MGP_BALBcJ_T0085235.1 MGP_BALBcJ_G0032552.1 mouse_genomes_project 7 100282466 100328358 - MGP_BALBcJ_P0085235 Ppme1 protein_coding protein_coding MGP_BALBcJ_T0005279.1 MGP_BALBcJ_G0004480.1 mouse_genomes_project 7 129265036 129266134 - Gm44672 antisense antisense MGP_BALBcJ_T0083533.1 MGP_BALBcJ_G0032133.1 mouse_genomes_project 7 43044042 43050221 + MGP_BALBcJ_P0083533 Klk8 protein_coding protein_coding MGP_BALBcJ_T0083534.1 MGP_BALBcJ_G0032133.1 mouse_genomes_project 7 43044061 43050070 + MGP_BALBcJ_P0083534 Klk8 protein_coding protein_coding MGP_BALBcJ_T0083535.1 MGP_BALBcJ_G0032133.1 mouse_genomes_project 7 43048263 43050225 + Klk8 protein_coding retained_intron MGP_BALBcJ_T0008850.1 MGP_BALBcJ_G0007146.1 mouse_genomes_project 7 43584571 43591584 + Gm36864 lincRNA lincRNA MGP_BALBcJ_T0085648.1 MGP_BALBcJ_G0032734.1 mouse_genomes_project 7 105491880 105493006 + MGP_BALBcJ_P0085648 Olfr692 protein_coding protein_coding MGP_BALBcJ_T0087433.1 MGP_BALBcJ_G0033152.1 mouse_genomes_project 7 140860365 140861421 + MGP_BALBcJ_P0087433 Olfr523 protein_coding protein_coding MGP_BALBcJ_T0015747.1 MGP_BALBcJ_G0013844.1 mouse_genomes_project 7 32454745 32455504 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005187.1 MGP_BALBcJ_G0004414.1 mouse_genomes_project 7 43190930 43322773 - antisense antisense MGP_BALBcJ_T0087283.1 MGP_BALBcJ_G0033109.1 mouse_genomes_project 7 134408194 134516721 + MGP_BALBcJ_P0087283 Fank1 protein_coding protein_coding MGP_BALBcJ_T0087284.1 MGP_BALBcJ_G0033109.1 mouse_genomes_project 7 134408224 134512177 + MGP_BALBcJ_P0087284 Fank1 protein_coding protein_coding MGP_BALBcJ_T0087285.1 MGP_BALBcJ_G0033109.1 mouse_genomes_project 7 134408275 134516054 + MGP_BALBcJ_P0087285 Fank1 protein_coding protein_coding MGP_BALBcJ_T0085810.1 MGP_BALBcJ_G0032800.1 mouse_genomes_project 7 108428863 108429961 - MGP_BALBcJ_P0085810 protein_coding protein_coding MGP_BALBcJ_T0082967.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875744 28896500 + MGP_BALBcJ_P0082967 Prodh2 protein_coding protein_coding MGP_BALBcJ_T0082968.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875780 28891807 + Prodh2 protein_coding processed_transcript MGP_BALBcJ_T0082969.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875780 28889614 + MGP_BALBcJ_P0082969 Prodh2 protein_coding protein_coding MGP_BALBcJ_T0082970.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875781 28876410 + Prodh2 protein_coding retained_intron MGP_BALBcJ_T0082971.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875781 28889842 + MGP_BALBcJ_P0082971 Prodh2 protein_coding protein_coding MGP_BALBcJ_T0082972.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875803 28889703 + MGP_BALBcJ_P0082972 Prodh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082973.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28875902 28889910 + MGP_BALBcJ_P0082973 Prodh2 protein_coding protein_coding MGP_BALBcJ_T0082974.1 MGP_BALBcJ_G0032007.1 mouse_genomes_project 7 28889941 28896136 + MGP_BALBcJ_P0082974 Prodh2 protein_coding protein_coding MGP_BALBcJ_T0002277.1 MGP_BALBcJ_G0002188.1 mouse_genomes_project 7 79825653 79827494 - TEC TEC MGP_BALBcJ_T0087893.1 MGP_BALBcJ_G0033262.1 mouse_genomes_project 7 144463408 144473394 - MGP_BALBcJ_P0087893 protein_coding protein_coding MGP_BALBcJ_T0084715.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80106799 80114314 - Furin protein_coding retained_intron MGP_BALBcJ_T0084716.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80107410 80121191 - MGP_BALBcJ_P0084716 Furin protein_coding protein_coding MGP_BALBcJ_T0084717.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80107410 80124298 - MGP_BALBcJ_P0084717 Furin protein_coding protein_coding MGP_BALBcJ_T0084718.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80107413 80120136 - MGP_BALBcJ_P0084718 Furin protein_coding protein_coding MGP_BALBcJ_T0084719.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80113960 80121006 - MGP_BALBcJ_P0084719 Furin protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084720.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80114270 80117869 - Furin protein_coding retained_intron MGP_BALBcJ_T0084721.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80116993 80124303 - MGP_BALBcJ_P0084721 Furin protein_coding protein_coding MGP_BALBcJ_T0084722.1 MGP_BALBcJ_G0032406.1 mouse_genomes_project 7 80117040 80122185 - MGP_BALBcJ_P0084722 Furin protein_coding protein_coding MGP_BALBcJ_T0085074.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97458878 97484212 - MGP_BALBcJ_P0085074 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085075.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97458881 97488041 - MGP_BALBcJ_P0085075 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085076.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97458886 97488051 - MGP_BALBcJ_P0085076 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085077.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97458887 97487960 - MGP_BALBcJ_P0085077 Aamdc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085078.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97458894 97488048 - Aamdc protein_coding processed_transcript MGP_BALBcJ_T0085079.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97459089 97488003 - MGP_BALBcJ_P0085079 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085080.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97459095 97488004 - MGP_BALBcJ_P0085080 Aamdc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085081.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97459112 97488036 - MGP_BALBcJ_P0085081 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085082.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97459217 97487981 - MGP_BALBcJ_P0085082 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085083.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97459262 97487944 - MGP_BALBcJ_P0085083 Aamdc protein_coding protein_coding MGP_BALBcJ_T0085084.1 MGP_BALBcJ_G0032512.1 mouse_genomes_project 7 97484458 97486789 - Aamdc protein_coding retained_intron MGP_BALBcJ_T0102744.1 MGP_BALBcJ_G0040559.1 mouse_genomes_project 7 43295145 43295946 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099018.1 MGP_BALBcJ_G0037060.1 mouse_genomes_project 7 145258588 145259049 - Gm14376 sense_intronic sense_intronic MGP_BALBcJ_T0087891.1 MGP_BALBcJ_G0033261.1 mouse_genomes_project 7 144410167 144451174 - MGP_BALBcJ_P0087891 Tnfrsf22 protein_coding protein_coding MGP_BALBcJ_T0087892.1 MGP_BALBcJ_G0033261.1 mouse_genomes_project 7 144421731 144451165 - MGP_BALBcJ_P0087892 Tnfrsf22 protein_coding protein_coding MGP_BALBcJ_T0086020.1 MGP_BALBcJ_G0032869.1 mouse_genomes_project 7 114678190 114692314 - MGP_BALBcJ_P0086020 Psma1 protein_coding protein_coding MGP_BALBcJ_T0086021.1 MGP_BALBcJ_G0032869.1 mouse_genomes_project 7 114678380 114692222 - Psma1 protein_coding processed_transcript MGP_BALBcJ_T0086022.1 MGP_BALBcJ_G0032869.1 mouse_genomes_project 7 114684077 114692250 - Psma1 protein_coding retained_intron MGP_BALBcJ_T0086023.1 MGP_BALBcJ_G0032869.1 mouse_genomes_project 7 114689989 114692239 - Psma1 protein_coding retained_intron MGP_BALBcJ_T0102793.1 MGP_BALBcJ_G0040608.1 mouse_genomes_project 7 85587310 85588049 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015808.1 MGP_BALBcJ_G0013905.1 mouse_genomes_project 7 72618211 72619211 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008805.1 MGP_BALBcJ_G0007110.1 mouse_genomes_project 7 29046551 29048869 + Gm26610 lincRNA lincRNA MGP_BALBcJ_T0010819.1 MGP_BALBcJ_G0008944.1 mouse_genomes_project 7 9701286 9701396 - Gm23521 miRNA miRNA MGP_BALBcJ_T0083706.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44212307 44218723 + MGP_BALBcJ_P0083706 protein_coding protein_coding MGP_BALBcJ_T0083707.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44212540 44218736 + MGP_BALBcJ_P0083707 protein_coding protein_coding MGP_BALBcJ_T0083708.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44212660 44218732 + protein_coding retained_intron MGP_BALBcJ_T0083709.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44212897 44216261 + MGP_BALBcJ_P0083709 protein_coding protein_coding MGP_BALBcJ_T0083710.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44212945 44218051 + MGP_BALBcJ_P0083710 protein_coding protein_coding MGP_BALBcJ_T0083711.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44213323 44217351 + MGP_BALBcJ_P0083711 protein_coding protein_coding MGP_BALBcJ_T0083712.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44213332 44218733 + MGP_BALBcJ_P0083712 protein_coding protein_coding MGP_BALBcJ_T0083713.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44213712 44216178 + MGP_BALBcJ_P0083713 protein_coding protein_coding MGP_BALBcJ_T0083714.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44214808 44215953 + MGP_BALBcJ_P0083714 protein_coding protein_coding MGP_BALBcJ_T0083715.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44215885 44218001 + MGP_BALBcJ_P0083715 protein_coding protein_coding MGP_BALBcJ_T0083716.1 MGP_BALBcJ_G0032172.1 mouse_genomes_project 7 44216234 44217959 + protein_coding retained_intron MGP_BALBcJ_T0015701.1 MGP_BALBcJ_G0013798.1 mouse_genomes_project 7 11619835 11620289 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102673.1 MGP_BALBcJ_G0040488.1 mouse_genomes_project 7 7526164 7527060 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085566.1 MGP_BALBcJ_G0032682.1 mouse_genomes_project 7 104201048 104201993 - MGP_BALBcJ_P0085566 Olfr642 protein_coding protein_coding MGP_BALBcJ_T0100103.1 MGP_BALBcJ_G0038139.1 mouse_genomes_project 7 128566520 128566676 - Gm22809 snRNA snRNA MGP_BALBcJ_T0084647.1 MGP_BALBcJ_G0032398.1 mouse_genomes_project 7 79982383 79985175 + MGP_BALBcJ_P0084647 Ngrn protein_coding protein_coding MGP_BALBcJ_T0084648.1 MGP_BALBcJ_G0032398.1 mouse_genomes_project 7 79982388 79985175 + Ngrn protein_coding retained_intron MGP_BALBcJ_T0005248.1 MGP_BALBcJ_G0004457.1 mouse_genomes_project 7 112904892 112913605 - Parvaos antisense antisense MGP_BALBcJ_T0008923.1 MGP_BALBcJ_G0007199.1 mouse_genomes_project 7 79283157 79284438 - Gm45168 lincRNA lincRNA MGP_BALBcJ_T0008924.1 MGP_BALBcJ_G0007199.1 mouse_genomes_project 7 79283298 79284449 - Gm45168 lincRNA lincRNA MGP_BALBcJ_T0008874.1 MGP_BALBcJ_G0007165.1 mouse_genomes_project 7 67874342 67963532 + lincRNA lincRNA MGP_BALBcJ_T0008875.1 MGP_BALBcJ_G0007165.1 mouse_genomes_project 7 67876445 67954062 + lincRNA lincRNA MGP_BALBcJ_T0008876.1 MGP_BALBcJ_G0007165.1 mouse_genomes_project 7 67900032 67963530 + lincRNA lincRNA MGP_BALBcJ_T0008877.1 MGP_BALBcJ_G0007165.1 mouse_genomes_project 7 67930720 67954141 + lincRNA lincRNA MGP_BALBcJ_T0085163.1 MGP_BALBcJ_G0032528.1 mouse_genomes_project 7 98762485 98773900 + MGP_BALBcJ_P0085163 Wnt11 protein_coding protein_coding MGP_BALBcJ_T0085164.1 MGP_BALBcJ_G0032528.1 mouse_genomes_project 7 98762485 98781114 + MGP_BALBcJ_P0085164 Wnt11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085165.1 MGP_BALBcJ_G0032528.1 mouse_genomes_project 7 98762504 98782498 + MGP_BALBcJ_P0085165 Wnt11 protein_coding protein_coding MGP_BALBcJ_T0085166.1 MGP_BALBcJ_G0032528.1 mouse_genomes_project 7 98766221 98781054 + MGP_BALBcJ_P0085166 Wnt11 protein_coding protein_coding MGP_BALBcJ_T0085167.1 MGP_BALBcJ_G0032528.1 mouse_genomes_project 7 98766274 98780874 + MGP_BALBcJ_P0085167 Wnt11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101354.1 MGP_BALBcJ_G0039390.1 mouse_genomes_project 7 112992548 112992678 - Gm24154 snoRNA snoRNA MGP_BALBcJ_T0086994.1 MGP_BALBcJ_G0033052.1 mouse_genomes_project 7 128495356 128499505 - MGP_BALBcJ_P0086994 Pycard protein_coding protein_coding MGP_BALBcJ_T0086995.1 MGP_BALBcJ_G0033052.1 mouse_genomes_project 7 128497288 128499165 - MGP_BALBcJ_P0086995 Pycard protein_coding protein_coding MGP_BALBcJ_T0102827.1 MGP_BALBcJ_G0040642.1 mouse_genomes_project 7 105952491 106710146 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081559.1 MGP_BALBcJ_G0031596.1 mouse_genomes_project 7 3803119 3829649 - MGP_BALBcJ_P0081559 Peg3 protein_coding protein_coding MGP_BALBcJ_T0081560.1 MGP_BALBcJ_G0031596.1 mouse_genomes_project 7 3808622 3829647 - MGP_BALBcJ_P0081560 Peg3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081561.1 MGP_BALBcJ_G0031596.1 mouse_genomes_project 7 3810923 3822443 - MGP_BALBcJ_P0081561 Peg3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081562.1 MGP_BALBcJ_G0031596.1 mouse_genomes_project 7 3821160 3829647 - Peg3 protein_coding retained_intron MGP_BALBcJ_T0083742.1 MGP_BALBcJ_G0032180.1 mouse_genomes_project 7 44343013 44352487 - MGP_BALBcJ_P0083742 protein_coding protein_coding MGP_BALBcJ_T0085916.1 MGP_BALBcJ_G0032846.1 mouse_genomes_project 7 110985575 110987735 + MGP_BALBcJ_P0085916 Adm protein_coding protein_coding MGP_BALBcJ_T0085917.1 MGP_BALBcJ_G0032846.1 mouse_genomes_project 7 110985583 110987734 + MGP_BALBcJ_P0085917 Adm protein_coding protein_coding MGP_BALBcJ_T0085918.1 MGP_BALBcJ_G0032846.1 mouse_genomes_project 7 110985942 110986466 + Adm protein_coding retained_intron MGP_BALBcJ_T0002306.1 MGP_BALBcJ_G0002217.1 mouse_genomes_project 7 128152969 128154158 - TEC TEC MGP_BALBcJ_T0087451.1 MGP_BALBcJ_G0033168.1 mouse_genomes_project 7 141359328 141365796 + MGP_BALBcJ_P0087451 Olfr53 protein_coding protein_coding MGP_BALBcJ_T0085978.1 MGP_BALBcJ_G0032858.1 mouse_genomes_project 7 112807790 112969162 + MGP_BALBcJ_P0085978 Parva protein_coding protein_coding MGP_BALBcJ_T0085979.1 MGP_BALBcJ_G0032858.1 mouse_genomes_project 7 112807995 112971225 + MGP_BALBcJ_P0085979 Parva protein_coding protein_coding MGP_BALBcJ_T0085980.1 MGP_BALBcJ_G0032858.1 mouse_genomes_project 7 112808194 112931141 + MGP_BALBcJ_P0085980 Parva protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085981.1 MGP_BALBcJ_G0032858.1 mouse_genomes_project 7 112878658 112925492 + Parva protein_coding processed_transcript MGP_BALBcJ_T0085982.1 MGP_BALBcJ_G0032858.1 mouse_genomes_project 7 112897198 112968503 + MGP_BALBcJ_P0085982 Parva protein_coding protein_coding MGP_BALBcJ_T0085983.1 MGP_BALBcJ_G0032858.1 mouse_genomes_project 7 112947905 112958355 + Parva protein_coding processed_transcript MGP_BALBcJ_T0084434.1 MGP_BALBcJ_G0032357.1 mouse_genomes_project 7 70965019 70967524 - MGP_BALBcJ_P0084434 Gm10295 protein_coding protein_coding MGP_BALBcJ_T0100094.1 MGP_BALBcJ_G0038130.1 mouse_genomes_project 7 120438736 120438837 + Gm25217 snRNA snRNA MGP_BALBcJ_T0081608.1 MGP_BALBcJ_G0031629.1 mouse_genomes_project 7 10116059 10128580 - MGP_BALBcJ_P0081608 Zscan18 protein_coding unknown_likely_coding MGP_BALBcJ_T0010827.1 MGP_BALBcJ_G0008952.1 mouse_genomes_project 7 23029978 23030042 - Mir7047 miRNA miRNA MGP_BALBcJ_T0102705.1 MGP_BALBcJ_G0040520.1 mouse_genomes_project 7 12016402 12016880 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082220.1 MGP_BALBcJ_G0031820.1 mouse_genomes_project 7 22602209 22605813 - MGP_BALBcJ_P0082220 Zfp575 protein_coding protein_coding MGP_BALBcJ_T0102760.1 MGP_BALBcJ_G0040575.1 mouse_genomes_project 7 47267654 47268474 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085647.1 MGP_BALBcJ_G0032733.1 mouse_genomes_project 7 105473962 105474931 - MGP_BALBcJ_P0085647 Olfr691 protein_coding protein_coding MGP_BALBcJ_T0015839.1 MGP_BALBcJ_G0013936.1 mouse_genomes_project 7 94491896 94492287 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008889.1 MGP_BALBcJ_G0007176.1 mouse_genomes_project 7 72299801 72300141 - Gm28744 lincRNA lincRNA MGP_BALBcJ_T0008866.1 MGP_BALBcJ_G0007159.1 mouse_genomes_project 7 65153544 65187877 + BC046251 lincRNA lincRNA MGP_BALBcJ_T0098648.1 MGP_BALBcJ_G0036702.1 mouse_genomes_project 7 96775167 96775260 - Gm25712 rRNA rRNA MGP_BALBcJ_T0082227.1 MGP_BALBcJ_G0031824.1 mouse_genomes_project 7 22686658 22690690 - MGP_BALBcJ_P0082227 Tex101 protein_coding protein_coding MGP_BALBcJ_T0005231.1 MGP_BALBcJ_G0004445.1 mouse_genomes_project 7 96242213 96244695 - Gm15412 antisense antisense MGP_BALBcJ_T0081495.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2087504 2112541 + MGP_BALBcJ_P0081495 Epn1 protein_coding protein_coding MGP_BALBcJ_T0081496.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2087509 2100838 + MGP_BALBcJ_P0081496 Epn1 protein_coding protein_coding MGP_BALBcJ_T0081497.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2087537 2112549 + MGP_BALBcJ_P0081497 Epn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0081498.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2087537 2094763 + MGP_BALBcJ_P0081498 Epn1 protein_coding protein_coding MGP_BALBcJ_T0081499.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2087562 2112539 + MGP_BALBcJ_P0081499 Epn1 protein_coding protein_coding MGP_BALBcJ_T0081500.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2094511 2106094 + Epn1 protein_coding processed_transcript MGP_BALBcJ_T0081501.1 MGP_BALBcJ_G0031566.1 mouse_genomes_project 7 2100714 2103872 + Epn1 protein_coding retained_intron MGP_BALBcJ_T0084297.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64082980 64324252 + MGP_BALBcJ_P0084297 Apba2 protein_coding protein_coding MGP_BALBcJ_T0084298.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64083223 64265829 + MGP_BALBcJ_P0084298 Apba2 protein_coding protein_coding MGP_BALBcJ_T0084299.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64083406 64265893 + MGP_BALBcJ_P0084299 Apba2 protein_coding protein_coding MGP_BALBcJ_T0084300.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64206017 64324232 + MGP_BALBcJ_P0084300 Apba2 protein_coding protein_coding MGP_BALBcJ_T0084301.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64299808 64314924 + Apba2 protein_coding processed_transcript MGP_BALBcJ_T0084302.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64314244 64323752 + Apba2 protein_coding processed_transcript MGP_BALBcJ_T0084303.1 MGP_BALBcJ_G0032330.1 mouse_genomes_project 7 64314988 64323783 + MGP_BALBcJ_P0084303 Apba2 protein_coding protein_coding MGP_BALBcJ_T0002294.1 MGP_BALBcJ_G0002205.1 mouse_genomes_project 7 122964510 122967233 + TEC TEC MGP_BALBcJ_T0009017.1 MGP_BALBcJ_G0007255.1 mouse_genomes_project 7 129115208 129117630 - Gm45121 lincRNA lincRNA MGP_BALBcJ_T0008789.1 MGP_BALBcJ_G0007096.1 mouse_genomes_project 7 17229193 17239659 - Gm26852 lincRNA lincRNA MGP_BALBcJ_T0085487.1 MGP_BALBcJ_G0032609.1 mouse_genomes_project 7 102739911 102749644 - MGP_BALBcJ_P0085487 Trim68 protein_coding protein_coding MGP_BALBcJ_T0085818.1 MGP_BALBcJ_G0032808.1 mouse_genomes_project 7 108720571 108721564 + MGP_BALBcJ_P0085818 protein_coding protein_coding MGP_BALBcJ_T0011662.1 MGP_BALBcJ_G0009787.1 mouse_genomes_project 7 28696725 28697096 + Gm24757 misc_RNA misc_RNA MGP_BALBcJ_T0083517.1 MGP_BALBcJ_G0032125.1 mouse_genomes_project 7 42895087 42904279 - MGP_BALBcJ_P0083517 Siglece protein_coding protein_coding MGP_BALBcJ_T0083518.1 MGP_BALBcJ_G0032125.1 mouse_genomes_project 7 42895558 42903471 - MGP_BALBcJ_P0083518 Siglece protein_coding protein_coding MGP_BALBcJ_T0010917.1 MGP_BALBcJ_G0009042.1 mouse_genomes_project 7 143341758 143341842 - Mir675 miRNA miRNA MGP_BALBcJ_T0083778.1 MGP_BALBcJ_G0032198.1 mouse_genomes_project 7 44555211 44556055 + MGP_BALBcJ_P0083778 Pth2 protein_coding protein_coding MGP_BALBcJ_T0083226.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32851070 32882043 - MGP_BALBcJ_P0083226 Uba2 protein_coding protein_coding MGP_BALBcJ_T0083227.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32851096 32852469 - Uba2 protein_coding retained_intron MGP_BALBcJ_T0083228.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32851465 32854931 - MGP_BALBcJ_P0083228 Uba2 protein_coding protein_coding MGP_BALBcJ_T0083229.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32851772 32853652 - Uba2 protein_coding retained_intron MGP_BALBcJ_T0083230.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32852811 32860343 - Uba2 protein_coding retained_intron MGP_BALBcJ_T0083231.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32865053 32875166 - MGP_BALBcJ_P0083231 Uba2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083232.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32868056 32871110 - Uba2 protein_coding retained_intron MGP_BALBcJ_T0083233.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32868645 32877886 - MGP_BALBcJ_P0083233 Uba2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083234.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32875112 32883067 - MGP_BALBcJ_P0083234 Uba2 protein_coding protein_coding MGP_BALBcJ_T0083235.1 MGP_BALBcJ_G0032059.1 mouse_genomes_project 7 32876445 32877809 - Uba2 protein_coding retained_intron MGP_BALBcJ_T0005205.1 MGP_BALBcJ_G0004428.1 mouse_genomes_project 7 74031216 74049838 + Gm7580 antisense antisense MGP_BALBcJ_T0084633.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79945427 79950835 - MGP_BALBcJ_P0084633 Cib1 protein_coding protein_coding MGP_BALBcJ_T0084634.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79945435 79950899 - MGP_BALBcJ_P0084634 Cib1 protein_coding protein_coding MGP_BALBcJ_T0084635.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79945435 79950840 - MGP_BALBcJ_P0084635 Cib1 protein_coding protein_coding MGP_BALBcJ_T0084636.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79946108 79948635 - Cib1 protein_coding retained_intron MGP_BALBcJ_T0084637.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79946432 79950872 - Cib1 protein_coding retained_intron MGP_BALBcJ_T0084638.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79946672 79951080 - MGP_BALBcJ_P0084638 Cib1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084639.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79949725 79951006 - Cib1 protein_coding retained_intron MGP_BALBcJ_T0084640.1 MGP_BALBcJ_G0032395.1 mouse_genomes_project 7 79949840 79950856 - Cib1 protein_coding retained_intron MGP_BALBcJ_T0084006.1 MGP_BALBcJ_G0032254.1 mouse_genomes_project 7 45788632 45791606 + MGP_BALBcJ_P0084006 Myod1 protein_coding protein_coding MGP_BALBcJ_T0081193.1 MGP_BALBcJ_G0031498.1 mouse_genomes_project 7 194432 204196 + MGP_BALBcJ_P0081193 Myadm protein_coding protein_coding MGP_BALBcJ_T0081195.1 MGP_BALBcJ_G0031498.1 mouse_genomes_project 7 195887 205262 + MGP_BALBcJ_P0081195 Myadm protein_coding protein_coding MGP_BALBcJ_T0081196.1 MGP_BALBcJ_G0031498.1 mouse_genomes_project 7 195928 206353 + MGP_BALBcJ_P0081196 Myadm protein_coding protein_coding MGP_BALBcJ_T0081197.1 MGP_BALBcJ_G0031498.1 mouse_genomes_project 7 196832 202910 + MGP_BALBcJ_P0081197 Myadm protein_coding protein_coding MGP_BALBcJ_T0081198.1 MGP_BALBcJ_G0031498.1 mouse_genomes_project 7 198840 205235 + MGP_BALBcJ_P0081198 Myadm protein_coding protein_coding MGP_BALBcJ_T0083291.1 MGP_BALBcJ_G0032069.1 mouse_genomes_project 7 33862810 33865443 + MGP_BALBcJ_P0083291 Cebpa protein_coding protein_coding MGP_BALBcJ_T0083292.1 MGP_BALBcJ_G0032069.1 mouse_genomes_project 7 33862820 33865443 + MGP_BALBcJ_P0083292 Cebpa protein_coding protein_coding MGP_BALBcJ_T0083062.1 MGP_BALBcJ_G0032027.1 mouse_genomes_project 7 29120768 29149624 + protein_coding processed_transcript MGP_BALBcJ_T0083063.1 MGP_BALBcJ_G0032027.1 mouse_genomes_project 7 29143935 29149632 + MGP_BALBcJ_P0083063 protein_coding protein_coding MGP_BALBcJ_T0083064.1 MGP_BALBcJ_G0032027.1 mouse_genomes_project 7 29143991 29149631 + MGP_BALBcJ_P0083064 protein_coding protein_coding MGP_BALBcJ_T0083065.1 MGP_BALBcJ_G0032027.1 mouse_genomes_project 7 29144019 29149632 + MGP_BALBcJ_P0083065 protein_coding protein_coding MGP_BALBcJ_T0083066.1 MGP_BALBcJ_G0032027.1 mouse_genomes_project 7 29146125 29149624 + MGP_BALBcJ_P0083066 protein_coding protein_coding MGP_BALBcJ_T0018309.1 MGP_BALBcJ_G0015604.1 mouse_genomes_project 7 43612020 43612465 + processed_transcript lincRNA MGP_BALBcJ_T0018310.1 MGP_BALBcJ_G0015604.1 mouse_genomes_project 7 43612103 43612462 + processed_transcript retained_intron MGP_BALBcJ_T0018311.1 MGP_BALBcJ_G0015604.1 mouse_genomes_project 7 43612134 43612463 + processed_transcript retained_intron MGP_BALBcJ_T0081728.1 MGP_BALBcJ_G0031670.1 mouse_genomes_project 7 13408971 13422972 - MGP_BALBcJ_P0081728 Crx protein_coding protein_coding MGP_BALBcJ_T0081729.1 MGP_BALBcJ_G0031670.1 mouse_genomes_project 7 13408972 13415409 - MGP_BALBcJ_P0081729 Crx protein_coding protein_coding MGP_BALBcJ_T0081730.1 MGP_BALBcJ_G0031670.1 mouse_genomes_project 7 13410250 13422876 - Crx protein_coding processed_transcript MGP_BALBcJ_T0081731.1 MGP_BALBcJ_G0031670.1 mouse_genomes_project 7 13410250 13422848 - MGP_BALBcJ_P0081731 Crx protein_coding protein_coding MGP_BALBcJ_T0081732.1 MGP_BALBcJ_G0031670.1 mouse_genomes_project 7 13411080 13414441 - MGP_BALBcJ_P0081732 Crx protein_coding protein_coding MGP_BALBcJ_T0002288.1 MGP_BALBcJ_G0002199.1 mouse_genomes_project 7 122326325 122327939 - TEC TEC MGP_BALBcJ_T0084618.1 MGP_BALBcJ_G0032391.1 mouse_genomes_project 7 79637054 79646598 - MGP_BALBcJ_P0084618 Arpin protein_coding protein_coding MGP_BALBcJ_T0015761.1 MGP_BALBcJ_G0013858.1 mouse_genomes_project 7 40331920 40332151 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084119.1 MGP_BALBcJ_G0032289.1 mouse_genomes_project 7 49201509 49206845 - MGP_BALBcJ_P0084119 Dbx1 protein_coding protein_coding MGP_BALBcJ_T0084435.1 MGP_BALBcJ_G0032358.1 mouse_genomes_project 7 71705679 71949814 - MGP_BALBcJ_P0084435 Mctp2 protein_coding protein_coding MGP_BALBcJ_T0084436.1 MGP_BALBcJ_G0032358.1 mouse_genomes_project 7 71708262 71741009 - MGP_BALBcJ_P0084436 Mctp2 protein_coding protein_coding MGP_BALBcJ_T0084437.1 MGP_BALBcJ_G0032358.1 mouse_genomes_project 7 71752138 71795436 - MGP_BALBcJ_P0084437 Mctp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084438.1 MGP_BALBcJ_G0032358.1 mouse_genomes_project 7 71863702 71867689 - Mctp2 protein_coding retained_intron MGP_BALBcJ_T0084439.1 MGP_BALBcJ_G0032358.1 mouse_genomes_project 7 71895696 71949814 - Mctp2 protein_coding retained_intron MGP_BALBcJ_T0084526.1 MGP_BALBcJ_G0032373.1 mouse_genomes_project 7 78613048 78619842 + MGP_BALBcJ_P0084526 Isg20 protein_coding protein_coding MGP_BALBcJ_T0084527.1 MGP_BALBcJ_G0032373.1 mouse_genomes_project 7 78613082 78619932 + MGP_BALBcJ_P0084527 Isg20 protein_coding protein_coding MGP_BALBcJ_T0084528.1 MGP_BALBcJ_G0032373.1 mouse_genomes_project 7 78613389 78620025 + MGP_BALBcJ_P0084528 Isg20 protein_coding protein_coding MGP_BALBcJ_T0084529.1 MGP_BALBcJ_G0032373.1 mouse_genomes_project 7 78613605 78616643 + Isg20 protein_coding retained_intron MGP_BALBcJ_T0084530.1 MGP_BALBcJ_G0032373.1 mouse_genomes_project 7 78613859 78619977 + MGP_BALBcJ_P0084530 Isg20 protein_coding protein_coding MGP_BALBcJ_T0084531.1 MGP_BALBcJ_G0032373.1 mouse_genomes_project 7 78613953 78619812 + MGP_BALBcJ_P0084531 Isg20 protein_coding protein_coding MGP_BALBcJ_T0010826.1 MGP_BALBcJ_G0008951.1 mouse_genomes_project 7 23012513 23012579 - Mir7046 miRNA miRNA MGP_BALBcJ_T0015899.1 MGP_BALBcJ_G0013996.1 mouse_genomes_project 7 129207507 129207791 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082729.1 MGP_BALBcJ_G0031949.1 mouse_genomes_project 7 27141782 27150003 + MGP_BALBcJ_P0082729 Lgals4 protein_coding protein_coding MGP_BALBcJ_T0082730.1 MGP_BALBcJ_G0031949.1 mouse_genomes_project 7 27142084 27143777 + Lgals4 protein_coding retained_intron MGP_BALBcJ_T0082731.1 MGP_BALBcJ_G0031949.1 mouse_genomes_project 7 27142115 27145997 + Lgals4 protein_coding retained_intron MGP_BALBcJ_T0082732.1 MGP_BALBcJ_G0031949.1 mouse_genomes_project 7 27142451 27149137 + MGP_BALBcJ_P0082732 Lgals4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082733.1 MGP_BALBcJ_G0031949.1 mouse_genomes_project 7 27143859 27149996 + Lgals4 protein_coding retained_intron MGP_BALBcJ_T0082734.1 MGP_BALBcJ_G0031949.1 mouse_genomes_project 7 27148928 27149998 + Lgals4 protein_coding retained_intron MGP_BALBcJ_T0015688.1 MGP_BALBcJ_G0013785.1 mouse_genomes_project 7 10141934 10142560 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100091.1 MGP_BALBcJ_G0038127.1 mouse_genomes_project 7 112305084 112305234 - Gm23345 snRNA snRNA MGP_BALBcJ_T0018390.1 MGP_BALBcJ_G0015636.1 mouse_genomes_project 7 134855157 134858388 - A130023I24Rik processed_transcript sense_intronic MGP_BALBcJ_T0018391.1 MGP_BALBcJ_G0015636.1 mouse_genomes_project 7 134855236 134857003 - A130023I24Rik processed_transcript retained_intron MGP_BALBcJ_T0010851.1 MGP_BALBcJ_G0008976.1 mouse_genomes_project 7 46519014 46519073 - Mir7056 miRNA miRNA MGP_BALBcJ_T0005244.1 MGP_BALBcJ_G0004454.1 mouse_genomes_project 7 104421865 104431192 + Gm15133 antisense antisense MGP_BALBcJ_T0005245.1 MGP_BALBcJ_G0004454.1 mouse_genomes_project 7 104421866 104431363 + Gm15133 antisense antisense MGP_BALBcJ_T0085822.1 MGP_BALBcJ_G0032812.1 mouse_genomes_project 7 108936963 108937971 + MGP_BALBcJ_P0085822 Olfr506 protein_coding protein_coding MGP_BALBcJ_T0082257.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945503 22967680 + MGP_BALBcJ_P0082257 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082258.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945628 22967677 + MGP_BALBcJ_P0082258 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082259.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945642 22967677 + MGP_BALBcJ_P0082259 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082260.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945647 22967682 + MGP_BALBcJ_P0082260 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082261.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945656 22946981 + Arhgef1 protein_coding processed_transcript MGP_BALBcJ_T0082262.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945662 22950485 + MGP_BALBcJ_P0082262 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082263.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22945666 22952553 + Arhgef1 protein_coding retained_intron MGP_BALBcJ_T0082264.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22946952 22956037 + MGP_BALBcJ_P0082264 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082265.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22946954 22967677 + Arhgef1 protein_coding retained_intron MGP_BALBcJ_T0082266.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22947001 22955186 + MGP_BALBcJ_P0082266 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082267.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22947003 22967680 + MGP_BALBcJ_P0082267 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082268.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22947036 22964179 + MGP_BALBcJ_P0082268 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082269.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22950239 22954726 + MGP_BALBcJ_P0082269 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082270.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22955202 22959539 + Arhgef1 protein_coding retained_intron MGP_BALBcJ_T0082271.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22957977 22967194 + MGP_BALBcJ_P0082271 Arhgef1 protein_coding protein_coding MGP_BALBcJ_T0082272.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22960348 22963467 + Arhgef1 protein_coding retained_intron MGP_BALBcJ_T0082273.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22964335 22965935 + Arhgef1 protein_coding retained_intron MGP_BALBcJ_T0082274.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22964440 22966573 + Arhgef1 protein_coding retained_intron MGP_BALBcJ_T0082275.1 MGP_BALBcJ_G0031835.1 mouse_genomes_project 7 22964450 22967024 + Arhgef1 protein_coding processed_transcript MGP_BALBcJ_T0084776.1 MGP_BALBcJ_G0032414.1 mouse_genomes_project 7 80726172 80778381 + MGP_BALBcJ_P0084776 Zfp592 protein_coding protein_coding MGP_BALBcJ_T0084777.1 MGP_BALBcJ_G0032414.1 mouse_genomes_project 7 80756842 80758016 + Zfp592 protein_coding processed_transcript MGP_BALBcJ_T0084778.1 MGP_BALBcJ_G0032414.1 mouse_genomes_project 7 80771021 80771583 + Zfp592 protein_coding retained_intron MGP_BALBcJ_T0084779.1 MGP_BALBcJ_G0032414.1 mouse_genomes_project 7 80771297 80774670 + Zfp592 protein_coding retained_intron MGP_BALBcJ_T0086939.1 MGP_BALBcJ_G0033042.1 mouse_genomes_project 7 128360348 128373972 - MGP_BALBcJ_P0086939 Zfp668 protein_coding protein_coding MGP_BALBcJ_T0086940.1 MGP_BALBcJ_G0033042.1 mouse_genomes_project 7 128363019 128373924 - MGP_BALBcJ_P0086940 Zfp668 protein_coding protein_coding MGP_BALBcJ_T0086941.1 MGP_BALBcJ_G0033042.1 mouse_genomes_project 7 128363295 128372790 - MGP_BALBcJ_P0086941 Zfp668 protein_coding protein_coding MGP_BALBcJ_T0086942.1 MGP_BALBcJ_G0033042.1 mouse_genomes_project 7 128363295 128373921 - MGP_BALBcJ_P0086942 Zfp668 protein_coding protein_coding MGP_BALBcJ_T0086943.1 MGP_BALBcJ_G0033042.1 mouse_genomes_project 7 128365343 128372801 - MGP_BALBcJ_P0086943 Zfp668 protein_coding protein_coding MGP_BALBcJ_T0086944.1 MGP_BALBcJ_G0033042.1 mouse_genomes_project 7 128370922 128373278 - Zfp668 protein_coding processed_transcript MGP_BALBcJ_T0086574.1 MGP_BALBcJ_G0032980.1 mouse_genomes_project 7 127169025 127175207 - MGP_BALBcJ_P0086574 Slx1b protein_coding protein_coding MGP_BALBcJ_T0086575.1 MGP_BALBcJ_G0032980.1 mouse_genomes_project 7 127170024 127175062 - Slx1b protein_coding retained_intron MGP_BALBcJ_T0086576.1 MGP_BALBcJ_G0032980.1 mouse_genomes_project 7 127170464 127175168 - Slx1b protein_coding retained_intron MGP_BALBcJ_T0086577.1 MGP_BALBcJ_G0032980.1 mouse_genomes_project 7 127170464 127175147 - MGP_BALBcJ_P0086577 Slx1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081674.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10599061 10618783 - MGP_BALBcJ_P0081674 6330408A02Rik protein_coding protein_coding MGP_BALBcJ_T0081675.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10599061 10618244 - MGP_BALBcJ_P0081675 6330408A02Rik protein_coding protein_coding MGP_BALBcJ_T0081676.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10599062 10618821 - MGP_BALBcJ_P0081676 6330408A02Rik protein_coding protein_coding MGP_BALBcJ_T0081677.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10605826 10618821 - 6330408A02Rik protein_coding retained_intron MGP_BALBcJ_T0081678.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10613345 10618770 - 6330408A02Rik protein_coding retained_intron MGP_BALBcJ_T0081679.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10613454 10618522 - 6330408A02Rik protein_coding retained_intron MGP_BALBcJ_T0081680.1 MGP_BALBcJ_G0031649.1 mouse_genomes_project 7 10617379 10618762 - MGP_BALBcJ_P0081680 6330408A02Rik protein_coding protein_coding MGP_BALBcJ_T0086186.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120006594 120053249 + MGP_BALBcJ_P0086186 Acsm2 protein_coding protein_coding MGP_BALBcJ_T0086187.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120013445 120049168 + MGP_BALBcJ_P0086187 Acsm2 protein_coding protein_coding MGP_BALBcJ_T0086188.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120013660 120053249 + MGP_BALBcJ_P0086188 Acsm2 protein_coding protein_coding MGP_BALBcJ_T0086189.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120013664 120030880 + MGP_BALBcJ_P0086189 Acsm2 protein_coding protein_coding MGP_BALBcJ_T0086190.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120013738 120034605 + Acsm2 protein_coding processed_transcript MGP_BALBcJ_T0086191.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120015788 120048576 + MGP_BALBcJ_P0086191 Acsm2 protein_coding unknown_likely_coding MGP_BALBcJ_T0086192.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120033345 120048737 + MGP_BALBcJ_P0086192 Acsm2 protein_coding protein_coding MGP_BALBcJ_T0086193.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120041418 120045121 + MGP_BALBcJ_P0086193 Acsm2 protein_coding protein_coding MGP_BALBcJ_T0086194.1 MGP_BALBcJ_G0032901.1 mouse_genomes_project 7 120043437 120044027 + Acsm2 protein_coding retained_intron MGP_BALBcJ_T0081465.1 MGP_BALBcJ_G0031549.1 mouse_genomes_project 7 1864269 1881439 + MGP_BALBcJ_P0081465 Isoc2a protein_coding protein_coding MGP_BALBcJ_T0085877.1 MGP_BALBcJ_G0032837.1 mouse_genomes_project 7 110142654 110210520 - MGP_BALBcJ_P0085877 Scube2 protein_coding protein_coding MGP_BALBcJ_T0085878.1 MGP_BALBcJ_G0032837.1 mouse_genomes_project 7 110142668 110210613 - MGP_BALBcJ_P0085878 Scube2 protein_coding protein_coding MGP_BALBcJ_T0085879.1 MGP_BALBcJ_G0032837.1 mouse_genomes_project 7 110142815 110210577 - MGP_BALBcJ_P0085879 Scube2 protein_coding protein_coding MGP_BALBcJ_T0085880.1 MGP_BALBcJ_G0032837.1 mouse_genomes_project 7 110143071 110186265 - Scube2 protein_coding processed_transcript MGP_BALBcJ_T0085881.1 MGP_BALBcJ_G0032837.1 mouse_genomes_project 7 110144627 110152209 - Scube2 protein_coding processed_transcript MGP_BALBcJ_T0002210.1 MGP_BALBcJ_G0002122.1 mouse_genomes_project 7 36311444 36312251 - TEC TEC MGP_BALBcJ_T0015827.1 MGP_BALBcJ_G0013924.1 mouse_genomes_project 7 82729995 82730313 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085564.1 MGP_BALBcJ_G0032680.1 mouse_genomes_project 7 104179633 104180578 - MGP_BALBcJ_P0085564 Olfr640 protein_coding protein_coding MGP_BALBcJ_T0085629.1 MGP_BALBcJ_G0032715.1 mouse_genomes_project 7 104950736 104952011 - MGP_BALBcJ_P0085629 Olfr666 protein_coding protein_coding MGP_BALBcJ_T0085801.1 MGP_BALBcJ_G0032791.1 mouse_genomes_project 7 108266582 108267515 + MGP_BALBcJ_P0085801 Olfr474 protein_coding protein_coding MGP_BALBcJ_T0085619.1 MGP_BALBcJ_G0032706.1 mouse_genomes_project 7 104614707 104615733 + MGP_BALBcJ_P0085619 Olfr654 protein_coding protein_coding MGP_BALBcJ_T0015699.1 MGP_BALBcJ_G0013796.1 mouse_genomes_project 7 11356081 11371422 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100057.1 MGP_BALBcJ_G0038093.1 mouse_genomes_project 7 28744796 28744987 - Gm25259 snRNA snRNA MGP_BALBcJ_T0082124.1 MGP_BALBcJ_G0031792.1 mouse_genomes_project 7 21546882 21547828 + MGP_BALBcJ_P0082124 protein_coding protein_coding MGP_BALBcJ_T0085862.1 MGP_BALBcJ_G0032831.1 mouse_genomes_project 7 109862662 109958086 - MGP_BALBcJ_P0085862 St5 protein_coding protein_coding MGP_BALBcJ_T0085863.1 MGP_BALBcJ_G0032831.1 mouse_genomes_project 7 109862662 109958086 - MGP_BALBcJ_P0085863 St5 protein_coding protein_coding MGP_BALBcJ_T0085864.1 MGP_BALBcJ_G0032831.1 mouse_genomes_project 7 109862671 109957507 - MGP_BALBcJ_P0085864 St5 protein_coding protein_coding MGP_BALBcJ_T0085865.1 MGP_BALBcJ_G0032831.1 mouse_genomes_project 7 109862671 109957507 - MGP_BALBcJ_P0085865 St5 protein_coding protein_coding MGP_BALBcJ_T0083447.1 MGP_BALBcJ_G0032103.1 mouse_genomes_project 7 41343219 41428977 + MGP_BALBcJ_P0083447 Vmn2r60 protein_coding protein_coding MGP_BALBcJ_T0081485.1 MGP_BALBcJ_G0031558.1 mouse_genomes_project 7 2019952 2032805 + MGP_BALBcJ_P0081485 Zfp865 protein_coding protein_coding MGP_BALBcJ_T0083809.1 MGP_BALBcJ_G0032204.1 mouse_genomes_project 7 44677244 44707587 - MGP_BALBcJ_P0083809 Trpm4 protein_coding protein_coding MGP_BALBcJ_T0015678.1 MGP_BALBcJ_G0013775.1 mouse_genomes_project 7 2461237 2461579 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085615.1 MGP_BALBcJ_G0032703.1 mouse_genomes_project 7 104576962 104577904 + MGP_BALBcJ_P0085615 Olfr651 protein_coding protein_coding MGP_BALBcJ_T0100110.1 MGP_BALBcJ_G0038146.1 mouse_genomes_project 7 142793510 142793617 - Gm25416 snRNA snRNA MGP_BALBcJ_T0087750.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143199788 143204827 + Syt8 protein_coding processed_transcript MGP_BALBcJ_T0087751.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143199884 143203920 + Syt8 protein_coding processed_transcript MGP_BALBcJ_T0087752.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143199915 143205348 + MGP_BALBcJ_P0087752 Syt8 protein_coding protein_coding MGP_BALBcJ_T0087753.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143199939 143205280 + Syt8 protein_coding retained_intron MGP_BALBcJ_T0087754.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143199939 143205280 + MGP_BALBcJ_P0087754 Syt8 protein_coding protein_coding MGP_BALBcJ_T0087755.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143199939 143205280 + MGP_BALBcJ_P0087755 Syt8 protein_coding protein_coding MGP_BALBcJ_T0087756.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143201786 143205257 + MGP_BALBcJ_P0087756 Syt8 protein_coding protein_coding MGP_BALBcJ_T0087757.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143203083 143203494 + MGP_BALBcJ_P0087757 Syt8 protein_coding protein_coding MGP_BALBcJ_T0087758.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143203372 143204936 + Syt8 protein_coding retained_intron MGP_BALBcJ_T0087759.1 MGP_BALBcJ_G0033239.1 mouse_genomes_project 7 143203966 143205264 + Syt8 protein_coding retained_intron MGP_BALBcJ_T0085556.1 MGP_BALBcJ_G0032672.1 mouse_genomes_project 7 104069040 104069988 + MGP_BALBcJ_P0085556 protein_coding protein_coding MGP_BALBcJ_T0101309.1 MGP_BALBcJ_G0039345.1 mouse_genomes_project 7 26633692 26633817 + AF357399 snoRNA snoRNA MGP_BALBcJ_T0015828.1 MGP_BALBcJ_G0013925.1 mouse_genomes_project 7 84593485 84593826 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085813.1 MGP_BALBcJ_G0032803.1 mouse_genomes_project 7 108580826 108581771 - MGP_BALBcJ_P0085813 Olfr488 protein_coding protein_coding MGP_BALBcJ_T0015818.1 MGP_BALBcJ_G0013915.1 mouse_genomes_project 7 77000961 77001464 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086314.1 MGP_BALBcJ_G0032936.1 mouse_genomes_project 7 122522860 122554638 - Ears2 protein_coding retained_intron MGP_BALBcJ_T0086315.1 MGP_BALBcJ_G0032936.1 mouse_genomes_project 7 122524468 122554697 - Ears2 protein_coding retained_intron MGP_BALBcJ_T0086316.1 MGP_BALBcJ_G0032936.1 mouse_genomes_project 7 122524468 122554890 - MGP_BALBcJ_P0086316 Ears2 protein_coding protein_coding MGP_BALBcJ_T0086762.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127684973 127689300 - MGP_BALBcJ_P0086762 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0086763.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127685309 127689238 - MGP_BALBcJ_P0086763 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0086764.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127685336 127689249 - Cd2bp2 protein_coding retained_intron MGP_BALBcJ_T0086765.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127685338 127689287 - MGP_BALBcJ_P0086765 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0086766.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127686957 127689175 - MGP_BALBcJ_P0086766 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0086767.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127687761 127688744 - MGP_BALBcJ_P0086767 Cd2bp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086768.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127687826 127689242 - MGP_BALBcJ_P0086768 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0086769.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127687921 127689266 - MGP_BALBcJ_P0086769 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0086770.1 MGP_BALBcJ_G0033011.1 mouse_genomes_project 7 127688391 127689350 - MGP_BALBcJ_P0086770 Cd2bp2 protein_coding protein_coding MGP_BALBcJ_T0010882.1 MGP_BALBcJ_G0009007.1 mouse_genomes_project 7 78585220 78585317 + Mir7-2 miRNA miRNA MGP_BALBcJ_T0086349.1 MGP_BALBcJ_G0032943.1 mouse_genomes_project 7 122714008 122717946 + MGP_BALBcJ_P0086349 Chp2 protein_coding protein_coding MGP_BALBcJ_T0086350.1 MGP_BALBcJ_G0032943.1 mouse_genomes_project 7 122716694 122717305 + Chp2 protein_coding processed_transcript MGP_BALBcJ_T0085508.1 MGP_BALBcJ_G0032628.1 mouse_genomes_project 7 103127333 103128293 + MGP_BALBcJ_P0085508 Olfr583 protein_coding protein_coding MGP_BALBcJ_T0005225.1 MGP_BALBcJ_G0004443.1 mouse_genomes_project 7 89372387 89373749 + Prss23os antisense antisense MGP_BALBcJ_T0005226.1 MGP_BALBcJ_G0004443.1 mouse_genomes_project 7 89372403 89372872 + Prss23os antisense antisense MGP_BALBcJ_T0087313.1 MGP_BALBcJ_G0033122.1 mouse_genomes_project 7 138073202 138112269 - 9430038I01Rik protein_coding processed_transcript MGP_BALBcJ_T0087314.1 MGP_BALBcJ_G0033122.1 mouse_genomes_project 7 138073202 138112275 - MGP_BALBcJ_P0087314 9430038I01Rik protein_coding protein_coding MGP_BALBcJ_T0087315.1 MGP_BALBcJ_G0033122.1 mouse_genomes_project 7 138073765 138112248 - MGP_BALBcJ_P0087315 9430038I01Rik protein_coding protein_coding MGP_BALBcJ_T0087316.1 MGP_BALBcJ_G0033122.1 mouse_genomes_project 7 138080959 138112269 - 9430038I01Rik protein_coding retained_intron MGP_BALBcJ_T0087317.1 MGP_BALBcJ_G0033122.1 mouse_genomes_project 7 138080991 138112245 - MGP_BALBcJ_P0087317 9430038I01Rik protein_coding protein_coding MGP_BALBcJ_T0082126.1 MGP_BALBcJ_G0031794.1 mouse_genomes_project 7 21870221 21871136 + MGP_BALBcJ_P0082126 Vmn1r178 protein_coding protein_coding MGP_BALBcJ_T0082888.1 MGP_BALBcJ_G0031989.1 mouse_genomes_project 7 28572858 28581150 - MGP_BALBcJ_P0082888 Capns1 protein_coding protein_coding MGP_BALBcJ_T0082889.1 MGP_BALBcJ_G0031989.1 mouse_genomes_project 7 28572906 28578796 - MGP_BALBcJ_P0082889 Capns1 protein_coding protein_coding MGP_BALBcJ_T0082890.1 MGP_BALBcJ_G0031989.1 mouse_genomes_project 7 28573084 28575928 - Capns1 protein_coding processed_transcript MGP_BALBcJ_T0082891.1 MGP_BALBcJ_G0031989.1 mouse_genomes_project 7 28573399 28579471 - Capns1 protein_coding processed_transcript MGP_BALBcJ_T0082892.1 MGP_BALBcJ_G0031989.1 mouse_genomes_project 7 28573423 28578102 - Capns1 protein_coding processed_transcript MGP_BALBcJ_T0008801.1 MGP_BALBcJ_G0007106.1 mouse_genomes_project 7 23975760 23984876 + Gm30146 lincRNA lincRNA MGP_BALBcJ_T0085749.1 MGP_BALBcJ_G0032752.1 mouse_genomes_project 7 105934925 105939367 - MGP_BALBcJ_P0085749 Mrpl17 protein_coding protein_coding MGP_BALBcJ_T0085750.1 MGP_BALBcJ_G0032752.1 mouse_genomes_project 7 105937924 105939226 - MGP_BALBcJ_P0085750 Mrpl17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085751.1 MGP_BALBcJ_G0032752.1 mouse_genomes_project 7 105937947 105939264 - Mrpl17 protein_coding retained_intron MGP_BALBcJ_T0085752.1 MGP_BALBcJ_G0032752.1 mouse_genomes_project 7 105938032 105939267 - Mrpl17 protein_coding processed_transcript MGP_BALBcJ_T0085753.1 MGP_BALBcJ_G0032752.1 mouse_genomes_project 7 105938388 105939296 - MGP_BALBcJ_P0085753 Mrpl17 protein_coding protein_coding MGP_BALBcJ_T0015728.1 MGP_BALBcJ_G0013825.1 mouse_genomes_project 7 23906902 23907518 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015857.1 MGP_BALBcJ_G0013954.1 mouse_genomes_project 7 103261511 103262174 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102743.1 MGP_BALBcJ_G0040558.1 mouse_genomes_project 7 43292004 43345766 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083114.1 MGP_BALBcJ_G0032035.1 mouse_genomes_project 7 29321159 29322908 - MGP_BALBcJ_P0083114 Hamp2 protein_coding protein_coding MGP_BALBcJ_T0083281.1 MGP_BALBcJ_G0032067.1 mouse_genomes_project 7 33653320 33787417 + MGP_BALBcJ_P0083281 Pepd protein_coding protein_coding MGP_BALBcJ_T0083282.1 MGP_BALBcJ_G0032067.1 mouse_genomes_project 7 33686083 33764519 + MGP_BALBcJ_P0083282 Pepd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083283.1 MGP_BALBcJ_G0032067.1 mouse_genomes_project 7 33709715 33783443 + Pepd protein_coding retained_intron MGP_BALBcJ_T0083284.1 MGP_BALBcJ_G0032067.1 mouse_genomes_project 7 33709942 33721217 + Pepd protein_coding retained_intron MGP_BALBcJ_T0083285.1 MGP_BALBcJ_G0032067.1 mouse_genomes_project 7 33783190 33787416 + Pepd protein_coding retained_intron MGP_BALBcJ_T0083286.1 MGP_BALBcJ_G0032067.1 mouse_genomes_project 7 33785898 33787243 + Pepd protein_coding retained_intron MGP_BALBcJ_T0015682.1 MGP_BALBcJ_G0013779.1 mouse_genomes_project 7 3087850 3088297 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015853.1 MGP_BALBcJ_G0013950.1 mouse_genomes_project 7 100548384 100548737 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086198.1 MGP_BALBcJ_G0032903.1 mouse_genomes_project 7 120145493 120170669 + MGP_BALBcJ_P0086198 Acsm4 protein_coding protein_coding MGP_BALBcJ_T0086199.1 MGP_BALBcJ_G0032903.1 mouse_genomes_project 7 120148792 120170446 + MGP_BALBcJ_P0086199 Acsm4 protein_coding unknown_likely_coding MGP_BALBcJ_T0008782.1 MGP_BALBcJ_G0007090.1 mouse_genomes_project 7 10318726 10321291 + Gm29638 lincRNA lincRNA MGP_BALBcJ_T0087595.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142077170 142101069 + MGP_BALBcJ_P0087595 Eps8l2 protein_coding protein_coding MGP_BALBcJ_T0087596.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142077246 142101069 + Eps8l2 protein_coding retained_intron MGP_BALBcJ_T0087597.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142077277 142093857 + Eps8l2 protein_coding processed_transcript MGP_BALBcJ_T0087598.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142077294 142093855 + Eps8l2 protein_coding retained_intron MGP_BALBcJ_T0087599.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142077296 142081281 + MGP_BALBcJ_P0087599 Eps8l2 protein_coding protein_coding MGP_BALBcJ_T0087600.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142080946 142093992 + Eps8l2 protein_coding retained_intron MGP_BALBcJ_T0087601.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142096058 142099464 + Eps8l2 protein_coding retained_intron MGP_BALBcJ_T0087602.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142096265 142099783 + Eps8l2 protein_coding processed_transcript MGP_BALBcJ_T0087603.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142098294 142099781 + Eps8l2 protein_coding processed_transcript MGP_BALBcJ_T0087604.1 MGP_BALBcJ_G0033208.1 mouse_genomes_project 7 142099585 142100716 + Eps8l2 protein_coding processed_transcript MGP_BALBcJ_T0102776.1 MGP_BALBcJ_G0040591.1 mouse_genomes_project 7 84571223 84572238 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084971.1 MGP_BALBcJ_G0032487.1 mouse_genomes_project 7 89807980 89809080 + MGP_BALBcJ_P0084971 protein_coding protein_coding MGP_BALBcJ_T0081575.1 MGP_BALBcJ_G0031606.1 mouse_genomes_project 7 7719745 7727911 - MGP_BALBcJ_P0081575 Zik1 protein_coding protein_coding MGP_BALBcJ_T0015734.1 MGP_BALBcJ_G0013831.1 mouse_genomes_project 7 24990379 24994248 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085766.1 MGP_BALBcJ_G0032763.1 mouse_genomes_project 7 107143237 107146494 - MGP_BALBcJ_P0085766 Olfr702 protein_coding protein_coding MGP_BALBcJ_T0084954.1 MGP_BALBcJ_G0032481.1 mouse_genomes_project 7 89370166 89379966 - MGP_BALBcJ_P0084954 Prss23 protein_coding protein_coding MGP_BALBcJ_T0008902.1 MGP_BALBcJ_G0007187.1 mouse_genomes_project 7 73408809 73443744 - Gm10619 lincRNA lincRNA MGP_BALBcJ_T0008903.1 MGP_BALBcJ_G0007187.1 mouse_genomes_project 7 73435534 73443816 - Gm10619 lincRNA lincRNA MGP_BALBcJ_T0015791.1 MGP_BALBcJ_G0013888.1 mouse_genomes_project 7 56369419 56369680 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018380.1 MGP_BALBcJ_G0015629.1 mouse_genomes_project 7 127380966 127386573 + Gm20650 processed_transcript processed_transcript MGP_BALBcJ_T0102719.1 MGP_BALBcJ_G0040534.1 mouse_genomes_project 7 24124648 24151896 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082831.1 MGP_BALBcJ_G0031970.1 mouse_genomes_project 7 28134918 28146232 + MGP_BALBcJ_P0082831 Zfp84 protein_coding protein_coding MGP_BALBcJ_T0083222.1 MGP_BALBcJ_G0032058.1 mouse_genomes_project 7 32819045 32843660 - MGP_BALBcJ_P0083222 Wtip protein_coding protein_coding MGP_BALBcJ_T0083223.1 MGP_BALBcJ_G0032058.1 mouse_genomes_project 7 32819667 32837837 - Wtip protein_coding processed_transcript MGP_BALBcJ_T0083224.1 MGP_BALBcJ_G0032058.1 mouse_genomes_project 7 32819718 32828569 - Wtip protein_coding retained_intron MGP_BALBcJ_T0083225.1 MGP_BALBcJ_G0032058.1 mouse_genomes_project 7 32819728 32843169 - MGP_BALBcJ_P0083225 Wtip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081491.1 MGP_BALBcJ_G0031564.1 mouse_genomes_project 7 2058087 2062142 + MGP_BALBcJ_P0081491 Ccdc106 protein_coding protein_coding MGP_BALBcJ_T0102726.1 MGP_BALBcJ_G0040541.1 mouse_genomes_project 7 32175851 32177037 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008882.1 MGP_BALBcJ_G0007169.1 mouse_genomes_project 7 70833676 70841127 + 6030442E23Rik lincRNA lincRNA MGP_BALBcJ_T0086779.1 MGP_BALBcJ_G0033013.1 mouse_genomes_project 7 127702053 127706674 + MGP_BALBcJ_P0086779 Mylpf protein_coding protein_coding MGP_BALBcJ_T0086780.1 MGP_BALBcJ_G0033013.1 mouse_genomes_project 7 127704912 127707439 + MGP_BALBcJ_P0086780 Mylpf protein_coding protein_coding MGP_BALBcJ_T0086781.1 MGP_BALBcJ_G0033013.1 mouse_genomes_project 7 127705830 127706639 + MGP_BALBcJ_P0086781 Mylpf protein_coding protein_coding MGP_BALBcJ_T0086782.1 MGP_BALBcJ_G0033013.1 mouse_genomes_project 7 127706265 127706607 + Mylpf protein_coding retained_intron MGP_BALBcJ_T0086783.1 MGP_BALBcJ_G0033013.1 mouse_genomes_project 7 127707047 127707439 + Mylpf protein_coding retained_intron MGP_BALBcJ_T0081509.1 MGP_BALBcJ_G0031573.1 mouse_genomes_project 7 2922133 2923096 - MGP_BALBcJ_P0081509 Vmn1r64 protein_coding protein_coding MGP_BALBcJ_T0015698.1 MGP_BALBcJ_G0013795.1 mouse_genomes_project 7 11356052 11371423 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086033.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115039115 115043969 - MGP_BALBcJ_P0086033 Calca protein_coding protein_coding MGP_BALBcJ_T0086034.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115039205 115040283 - Calca protein_coding retained_intron MGP_BALBcJ_T0086035.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115040189 115043919 - MGP_BALBcJ_P0086035 Calca protein_coding protein_coding MGP_BALBcJ_T0086036.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115040904 115043924 - MGP_BALBcJ_P0086036 Calca protein_coding protein_coding MGP_BALBcJ_T0086037.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115041021 115043907 - MGP_BALBcJ_P0086037 Calca protein_coding protein_coding MGP_BALBcJ_T0086038.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115041952 115043918 - MGP_BALBcJ_P0086038 Calca protein_coding protein_coding MGP_BALBcJ_T0086039.1 MGP_BALBcJ_G0032872.1 mouse_genomes_project 7 115041983 115043883 - MGP_BALBcJ_P0086039 Calca protein_coding protein_coding MGP_BALBcJ_T0082444.1 MGP_BALBcJ_G0031873.1 mouse_genomes_project 7 24757002 24768602 - MGP_BALBcJ_P0082444 protein_coding protein_coding MGP_BALBcJ_T0102678.1 MGP_BALBcJ_G0040493.1 mouse_genomes_project 7 7889630 7889950 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010871.1 MGP_BALBcJ_G0008996.1 mouse_genomes_project 7 61461680 61461760 - Mir344-2 miRNA miRNA MGP_BALBcJ_T0085252.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100452755 100461422 + MGP_BALBcJ_P0085252 Ucp2 protein_coding protein_coding MGP_BALBcJ_T0085253.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100452782 100456349 + Ucp2 protein_coding retained_intron MGP_BALBcJ_T0085254.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100453211 100456564 + MGP_BALBcJ_P0085254 Ucp2 protein_coding protein_coding MGP_BALBcJ_T0085255.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100453483 100456706 + MGP_BALBcJ_P0085255 Ucp2 protein_coding protein_coding MGP_BALBcJ_T0085256.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100455479 100457657 + MGP_BALBcJ_P0085256 Ucp2 protein_coding protein_coding MGP_BALBcJ_T0085257.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100456596 100458026 + Ucp2 protein_coding processed_transcript MGP_BALBcJ_T0085258.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100456668 100458141 + Ucp2 protein_coding processed_transcript MGP_BALBcJ_T0085259.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100457541 100458012 + Ucp2 protein_coding processed_transcript MGP_BALBcJ_T0085260.1 MGP_BALBcJ_G0032555.1 mouse_genomes_project 7 100457746 100458703 + Ucp2 protein_coding processed_transcript MGP_BALBcJ_T0085178.1 MGP_BALBcJ_G0032534.1 mouse_genomes_project 7 99314078 99395931 + MGP_BALBcJ_P0085178 Gdpd5 protein_coding unknown_likely_coding MGP_BALBcJ_T0085179.1 MGP_BALBcJ_G0032534.1 mouse_genomes_project 7 99314152 99395921 + MGP_BALBcJ_P0085179 Gdpd5 protein_coding protein_coding MGP_BALBcJ_T0085278.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100610553 100624561 - MGP_BALBcJ_P0085278 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085279.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100611531 100624588 - MGP_BALBcJ_P0085279 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085280.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100611531 100630014 - MGP_BALBcJ_P0085280 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085281.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100611531 100629965 - MGP_BALBcJ_P0085281 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085282.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100611535 100626064 - MGP_BALBcJ_P0085282 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085283.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100611535 100626064 - MGP_BALBcJ_P0085283 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085284.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100612278 100625972 - MGP_BALBcJ_P0085284 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085285.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100612439 100621399 - Plekhb1 protein_coding retained_intron MGP_BALBcJ_T0085286.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100612581 100629915 - MGP_BALBcJ_P0085286 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085287.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100613203 100624711 - MGP_BALBcJ_P0085287 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0085288.1 MGP_BALBcJ_G0032560.1 mouse_genomes_project 7 100613271 100626030 - MGP_BALBcJ_P0085288 Plekhb1 protein_coding protein_coding MGP_BALBcJ_T0015780.1 MGP_BALBcJ_G0013877.1 mouse_genomes_project 7 46247763 46248297 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081852.1 MGP_BALBcJ_G0031701.1 mouse_genomes_project 7 14495580 14499996 + MGP_BALBcJ_P0081852 Ptgir protein_coding protein_coding MGP_BALBcJ_T0081853.1 MGP_BALBcJ_G0031701.1 mouse_genomes_project 7 14495604 14499991 + MGP_BALBcJ_P0081853 Ptgir protein_coding protein_coding MGP_BALBcJ_T0087681.1 MGP_BALBcJ_G0033218.1 mouse_genomes_project 7 142217634 142233916 + MGP_BALBcJ_P0087681 Tspan4 protein_coding protein_coding MGP_BALBcJ_T0087682.1 MGP_BALBcJ_G0033218.1 mouse_genomes_project 7 142217637 142233929 + MGP_BALBcJ_P0087682 Tspan4 protein_coding protein_coding MGP_BALBcJ_T0087683.1 MGP_BALBcJ_G0033218.1 mouse_genomes_project 7 142217860 142231733 + MGP_BALBcJ_P0087683 Tspan4 protein_coding protein_coding MGP_BALBcJ_T0087684.1 MGP_BALBcJ_G0033218.1 mouse_genomes_project 7 142224338 142235066 + MGP_BALBcJ_P0087684 Tspan4 protein_coding protein_coding MGP_BALBcJ_T0087685.1 MGP_BALBcJ_G0033218.1 mouse_genomes_project 7 142233601 142235073 + Tspan4 protein_coding retained_intron MGP_BALBcJ_T0015727.1 MGP_BALBcJ_G0013824.1 mouse_genomes_project 7 23714094 23714671 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010816.1 MGP_BALBcJ_G0008941.1 mouse_genomes_project 7 2152260 2152338 - Gm26217 miRNA miRNA MGP_BALBcJ_T0082079.1 MGP_BALBcJ_G0031774.1 mouse_genomes_project 7 17556574 17571285 - MGP_BALBcJ_P0082079 Tomm40 protein_coding protein_coding MGP_BALBcJ_T0082080.1 MGP_BALBcJ_G0031774.1 mouse_genomes_project 7 17556590 17571272 - MGP_BALBcJ_P0082080 Tomm40 protein_coding protein_coding MGP_BALBcJ_T0082081.1 MGP_BALBcJ_G0031774.1 mouse_genomes_project 7 17557082 17566812 - Tomm40 protein_coding retained_intron MGP_BALBcJ_T0082082.1 MGP_BALBcJ_G0031774.1 mouse_genomes_project 7 17557926 17558402 - MGP_BALBcJ_P0082082 Tomm40 protein_coding protein_coding MGP_BALBcJ_T0082083.1 MGP_BALBcJ_G0031774.1 mouse_genomes_project 7 17567260 17571275 - Tomm40 protein_coding retained_intron MGP_BALBcJ_T0100099.1 MGP_BALBcJ_G0038135.1 mouse_genomes_project 7 127042482 127042589 - Gm24596 snRNA snRNA MGP_BALBcJ_T0087837.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143761946 143776500 + MGP_BALBcJ_P0087837 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087838.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143761960 143764380 + Tspan32 protein_coding retained_intron MGP_BALBcJ_T0087839.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762538 143776658 + MGP_BALBcJ_P0087839 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087840.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762558 143776497 + MGP_BALBcJ_P0087840 Tspan32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087841.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762566 143776500 + MGP_BALBcJ_P0087841 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087842.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762580 143776500 + MGP_BALBcJ_P0087842 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087843.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762594 143776500 + MGP_BALBcJ_P0087843 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087844.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762594 143776500 + MGP_BALBcJ_P0087844 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087845.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143762823 143774687 + MGP_BALBcJ_P0087845 Tspan32 protein_coding protein_coding MGP_BALBcJ_T0087846.1 MGP_BALBcJ_G0033250.1 mouse_genomes_project 7 143774422 143775917 + Tspan32 protein_coding retained_intron MGP_BALBcJ_T0085274.1 MGP_BALBcJ_G0032559.1 mouse_genomes_project 7 100575349 100608931 + MGP_BALBcJ_P0085274 Rab6a protein_coding protein_coding MGP_BALBcJ_T0085275.1 MGP_BALBcJ_G0032559.1 mouse_genomes_project 7 100575526 100608931 + MGP_BALBcJ_P0085275 Rab6a protein_coding protein_coding MGP_BALBcJ_T0085276.1 MGP_BALBcJ_G0032559.1 mouse_genomes_project 7 100575630 100608931 + MGP_BALBcJ_P0085276 Rab6a protein_coding protein_coding MGP_BALBcJ_T0085277.1 MGP_BALBcJ_G0032559.1 mouse_genomes_project 7 100601994 100607030 + Rab6a protein_coding retained_intron MGP_BALBcJ_T0081546.1 MGP_BALBcJ_G0031586.1 mouse_genomes_project 7 3503676 3541395 + MGP_BALBcJ_P0081546 Gm20715 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085384.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101923380 101941877 + MGP_BALBcJ_P0085384 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085385.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101938363 101940359 + Anapc15 protein_coding processed_transcript MGP_BALBcJ_T0085386.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101938673 101941874 + MGP_BALBcJ_P0085386 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085387.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101938741 101940561 + Anapc15 protein_coding retained_intron MGP_BALBcJ_T0085388.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101938749 101941814 + MGP_BALBcJ_P0085388 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085389.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101938750 101943973 + MGP_BALBcJ_P0085389 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085390.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101938761 101941872 + Anapc15 protein_coding retained_intron MGP_BALBcJ_T0085391.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101939196 101940362 + Anapc15 protein_coding processed_transcript MGP_BALBcJ_T0085392.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101939294 101941376 + MGP_BALBcJ_P0085392 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085393.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101939721 101940912 + Anapc15 protein_coding retained_intron MGP_BALBcJ_T0085394.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101940065 101944179 + MGP_BALBcJ_P0085394 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085395.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101940128 101943973 + MGP_BALBcJ_P0085395 Anapc15 protein_coding protein_coding MGP_BALBcJ_T0085397.1 MGP_BALBcJ_G0032578.1 mouse_genomes_project 7 101941325 101941878 + Anapc15 protein_coding processed_transcript MGP_BALBcJ_T0102750.1 MGP_BALBcJ_G0040565.1 mouse_genomes_project 7 43361108 43363321 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085057.1 MGP_BALBcJ_G0032508.1 mouse_genomes_project 7 97301934 97310584 + MGP_BALBcJ_P0085057 Ndufc2 protein_coding protein_coding MGP_BALBcJ_T0085058.1 MGP_BALBcJ_G0032508.1 mouse_genomes_project 7 97302034 97309862 + MGP_BALBcJ_P0085058 Ndufc2 protein_coding protein_coding MGP_BALBcJ_T0083994.1 MGP_BALBcJ_G0032250.1 mouse_genomes_project 7 45503335 45504508 - MGP_BALBcJ_P0083994 Kcnj11 protein_coding protein_coding MGP_BALBcJ_T0005169.1 MGP_BALBcJ_G0004403.1 mouse_genomes_project 7 29580763 29588698 + Gm10640 antisense antisense MGP_BALBcJ_T0005170.1 MGP_BALBcJ_G0004403.1 mouse_genomes_project 7 29587501 29596057 + Gm10640 antisense antisense MGP_BALBcJ_T0102795.1 MGP_BALBcJ_G0040610.1 mouse_genomes_project 7 85668793 85669101 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084257.1 MGP_BALBcJ_G0032324.1 mouse_genomes_project 7 63528910 63532799 + MGP_BALBcJ_P0084257 E030018B13Rik protein_coding protein_coding MGP_BALBcJ_T0102680.1 MGP_BALBcJ_G0040495.1 mouse_genomes_project 7 8971347 8972270 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098774.1 MGP_BALBcJ_G0036828.1 mouse_genomes_project 7 81277716 81277843 + Mir1839 scaRNA scaRNA MGP_BALBcJ_T0005176.1 MGP_BALBcJ_G0004408.1 mouse_genomes_project 7 33861557 33863123 - Gm45091 antisense antisense MGP_BALBcJ_T0102708.1 MGP_BALBcJ_G0040523.1 mouse_genomes_project 7 12369087 12369352 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082912.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28677604 28693551 + MGP_BALBcJ_P0082912 Clip3 protein_coding protein_coding MGP_BALBcJ_T0082913.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28677660 28678605 + Clip3 protein_coding retained_intron MGP_BALBcJ_T0082914.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28677661 28682921 + MGP_BALBcJ_P0082914 Clip3 protein_coding protein_coding MGP_BALBcJ_T0082915.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28677671 28682677 + MGP_BALBcJ_P0082915 Clip3 protein_coding protein_coding MGP_BALBcJ_T0082916.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28677890 28682688 + MGP_BALBcJ_P0082916 Clip3 protein_coding protein_coding MGP_BALBcJ_T0082917.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28682870 28684913 + Clip3 protein_coding processed_transcript MGP_BALBcJ_T0082918.1 MGP_BALBcJ_G0031995.1 mouse_genomes_project 7 28689651 28692487 + Clip3 protein_coding processed_transcript MGP_BALBcJ_T0081346.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1446393 1454926 + MGP_BALBcJ_P0081346 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081347.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1446393 1455669 + MGP_BALBcJ_P0081347 Eps8l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081348.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1446402 1465094 + MGP_BALBcJ_P0081348 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081349.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450191 1456533 + MGP_BALBcJ_P0081349 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081350.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450433 1455068 + Eps8l1 protein_coding retained_intron MGP_BALBcJ_T0081351.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450440 1455878 + Eps8l1 protein_coding retained_intron MGP_BALBcJ_T0081352.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450440 1464932 + MGP_BALBcJ_P0081352 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081353.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450467 1455741 + MGP_BALBcJ_P0081353 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081354.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450547 1466177 + MGP_BALBcJ_P0081354 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081355.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450559 1464930 + MGP_BALBcJ_P0081355 Eps8l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081356.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1450567 1455618 + MGP_BALBcJ_P0081356 Eps8l1 protein_coding protein_coding MGP_BALBcJ_T0081357.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1459624 1460278 + Eps8l1 protein_coding processed_transcript MGP_BALBcJ_T0081358.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1463117 1463660 + Eps8l1 protein_coding processed_transcript MGP_BALBcJ_T0081359.1 MGP_BALBcJ_G0031527.1 mouse_genomes_project 7 1463355 1464934 + MGP_BALBcJ_P0081359 Eps8l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082491.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25470151 25495680 + MGP_BALBcJ_P0082491 Coq8b protein_coding protein_coding MGP_BALBcJ_T0082492.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25470341 25495674 + MGP_BALBcJ_P0082492 Coq8b protein_coding protein_coding MGP_BALBcJ_T0082493.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25470500 25495675 + MGP_BALBcJ_P0082493 Coq8b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082494.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25477181 25480946 + Coq8b protein_coding processed_transcript MGP_BALBcJ_T0082495.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25477442 25480246 + Coq8b protein_coding retained_intron MGP_BALBcJ_T0082496.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25487911 25495673 + Coq8b protein_coding retained_intron MGP_BALBcJ_T0082497.1 MGP_BALBcJ_G0031888.1 mouse_genomes_project 7 25488113 25495143 + Coq8b protein_coding processed_transcript MGP_BALBcJ_T0015781.1 MGP_BALBcJ_G0013878.1 mouse_genomes_project 7 47679403 47679677 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002237.1 MGP_BALBcJ_G0002149.1 mouse_genomes_project 7 63810666 63811102 - TEC TEC MGP_BALBcJ_T0087439.1 MGP_BALBcJ_G0033156.1 mouse_genomes_project 7 141012990 141014040 + MGP_BALBcJ_P0087439 Olfr525 protein_coding protein_coding MGP_BALBcJ_T0005153.1 MGP_BALBcJ_G0004390.1 mouse_genomes_project 7 26202047 26205114 + Gm26891 antisense antisense MGP_BALBcJ_T0005190.1 MGP_BALBcJ_G0004417.1 mouse_genomes_project 7 44934981 44936063 - antisense antisense MGP_BALBcJ_T0085296.1 MGP_BALBcJ_G0032563.1 mouse_genomes_project 7 100849338 100909440 - MGP_BALBcJ_P0085296 Arhgef17 protein_coding protein_coding MGP_BALBcJ_T0085297.1 MGP_BALBcJ_G0032563.1 mouse_genomes_project 7 100849368 100874218 - MGP_BALBcJ_P0085297 Arhgef17 protein_coding unknown_likely_coding MGP_BALBcJ_T0084608.1 MGP_BALBcJ_G0032387.1 mouse_genomes_project 7 79503246 79504794 - MGP_BALBcJ_P0084608 Mesp1 protein_coding protein_coding MGP_BALBcJ_T0002259.1 MGP_BALBcJ_G0002170.1 mouse_genomes_project 7 75690920 75692976 + TEC TEC MGP_BALBcJ_T0081721.1 MGP_BALBcJ_G0031668.1 mouse_genomes_project 7 12598515 12600108 - MGP_BALBcJ_P0081721 Obox7 protein_coding protein_coding MGP_BALBcJ_T0085399.1 MGP_BALBcJ_G0032580.1 mouse_genomes_project 7 101948311 101969115 + MGP_BALBcJ_P0085399 Lamtor1 protein_coding protein_coding MGP_BALBcJ_T0085400.1 MGP_BALBcJ_G0032580.1 mouse_genomes_project 7 101948332 101953651 + MGP_BALBcJ_P0085400 Lamtor1 protein_coding protein_coding MGP_BALBcJ_T0082330.1 MGP_BALBcJ_G0031846.1 mouse_genomes_project 7 23354932 23357861 - MGP_BALBcJ_P0082330 Pafah1b3 protein_coding protein_coding MGP_BALBcJ_T0082331.1 MGP_BALBcJ_G0031846.1 mouse_genomes_project 7 23354940 23356594 - Pafah1b3 protein_coding retained_intron MGP_BALBcJ_T0082332.1 MGP_BALBcJ_G0031846.1 mouse_genomes_project 7 23355250 23357774 - MGP_BALBcJ_P0082332 Pafah1b3 protein_coding protein_coding MGP_BALBcJ_T0082333.1 MGP_BALBcJ_G0031846.1 mouse_genomes_project 7 23355857 23357829 - MGP_BALBcJ_P0082333 Pafah1b3 protein_coding protein_coding MGP_BALBcJ_T0082334.1 MGP_BALBcJ_G0031846.1 mouse_genomes_project 7 23356511 23357813 - Pafah1b3 protein_coding retained_intron MGP_BALBcJ_T0082335.1 MGP_BALBcJ_G0031846.1 mouse_genomes_project 7 23356765 23357826 - Pafah1b3 protein_coding processed_transcript MGP_BALBcJ_T0082656.1 MGP_BALBcJ_G0031931.1 mouse_genomes_project 7 26720049 26730051 + MGP_BALBcJ_P0082656 Gmfg protein_coding protein_coding MGP_BALBcJ_T0082657.1 MGP_BALBcJ_G0031931.1 mouse_genomes_project 7 26720089 26730008 + MGP_BALBcJ_P0082657 Gmfg protein_coding protein_coding MGP_BALBcJ_T0082658.1 MGP_BALBcJ_G0031931.1 mouse_genomes_project 7 26723414 26730044 + MGP_BALBcJ_P0082658 Gmfg protein_coding protein_coding MGP_BALBcJ_T0082659.1 MGP_BALBcJ_G0031931.1 mouse_genomes_project 7 26723551 26729497 + MGP_BALBcJ_P0082659 Gmfg protein_coding protein_coding MGP_BALBcJ_T0082660.1 MGP_BALBcJ_G0031931.1 mouse_genomes_project 7 26726618 26731738 + Gmfg protein_coding processed_transcript MGP_BALBcJ_T0085827.1 MGP_BALBcJ_G0032817.1 mouse_genomes_project 7 109036112 109037168 + MGP_BALBcJ_P0085827 Olfr512 protein_coding protein_coding MGP_BALBcJ_T0082791.1 MGP_BALBcJ_G0031963.1 mouse_genomes_project 7 27608461 27617677 + MGP_BALBcJ_P0082791 Yif1b protein_coding protein_coding MGP_BALBcJ_T0082792.1 MGP_BALBcJ_G0031963.1 mouse_genomes_project 7 27608485 27617677 + MGP_BALBcJ_P0082792 Yif1b protein_coding protein_coding MGP_BALBcJ_T0082793.1 MGP_BALBcJ_G0031963.1 mouse_genomes_project 7 27608501 27614973 + MGP_BALBcJ_P0082793 Yif1b protein_coding protein_coding MGP_BALBcJ_T0082794.1 MGP_BALBcJ_G0031963.1 mouse_genomes_project 7 27608584 27617741 + MGP_BALBcJ_P0082794 Yif1b protein_coding protein_coding MGP_BALBcJ_T0082795.1 MGP_BALBcJ_G0031963.1 mouse_genomes_project 7 27608605 27616126 + Yif1b protein_coding processed_transcript MGP_BALBcJ_T0081594.1 MGP_BALBcJ_G0031621.1 mouse_genomes_project 7 9650283 9651201 + MGP_BALBcJ_P0081594 Vmn1r82 protein_coding protein_coding MGP_BALBcJ_T0081595.1 MGP_BALBcJ_G0031621.1 mouse_genomes_project 7 9650286 9651201 + MGP_BALBcJ_P0081595 Vmn1r82 protein_coding protein_coding MGP_BALBcJ_T0086098.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116781530 116888674 - MGP_BALBcJ_P0086098 Pik3c2a protein_coding protein_coding MGP_BALBcJ_T0086099.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116781541 116784895 - Pik3c2a protein_coding retained_intron MGP_BALBcJ_T0086100.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116783870 116812788 - MGP_BALBcJ_P0086100 Pik3c2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086101.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116783992 116888674 - MGP_BALBcJ_P0086101 Pik3c2a protein_coding protein_coding MGP_BALBcJ_T0086102.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116786171 116786912 - Pik3c2a protein_coding retained_intron MGP_BALBcJ_T0086103.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116833341 116888672 - MGP_BALBcJ_P0086103 Pik3c2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086104.1 MGP_BALBcJ_G0032879.1 mouse_genomes_project 7 116834336 116888664 - Pik3c2a protein_coding retained_intron MGP_BALBcJ_T0015763.1 MGP_BALBcJ_G0013860.1 mouse_genomes_project 7 40341199 40344689 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085567.1 MGP_BALBcJ_G0032683.1 mouse_genomes_project 7 104210466 104211411 - MGP_BALBcJ_P0085567 protein_coding protein_coding MGP_BALBcJ_T0101967.1 MGP_BALBcJ_G0039822.1 mouse_genomes_project 7 15398020 15407789 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101968.1 MGP_BALBcJ_G0039822.1 mouse_genomes_project 7 15398020 15407420 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0085474.1 MGP_BALBcJ_G0032597.1 mouse_genomes_project 7 102543355 102547811 - MGP_BALBcJ_P0085474 Olfr544 protein_coding protein_coding MGP_BALBcJ_T0081889.1 MGP_BALBcJ_G0031717.1 mouse_genomes_project 7 15970356 15991782 + MGP_BALBcJ_P0081889 Mill1 protein_coding protein_coding MGP_BALBcJ_T0085085.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97488450 97491542 + Rsf1 protein_coding retained_intron MGP_BALBcJ_T0085086.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97488458 97595346 + Rsf1 protein_coding retained_intron MGP_BALBcJ_T0085087.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97488458 97601698 + MGP_BALBcJ_P0085087 Rsf1 protein_coding protein_coding MGP_BALBcJ_T0085088.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97488468 97548608 + MGP_BALBcJ_P0085088 Rsf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085089.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97566326 97570041 + Rsf1 protein_coding retained_intron MGP_BALBcJ_T0085090.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97571678 97595534 + MGP_BALBcJ_P0085090 Rsf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085091.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97578620 97585129 + Rsf1 protein_coding retained_intron MGP_BALBcJ_T0085092.1 MGP_BALBcJ_G0032513.1 mouse_genomes_project 7 97578975 97589721 + MGP_BALBcJ_P0085092 Rsf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086436.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126177202 126187508 + D430042O09Rik protein_coding retained_intron MGP_BALBcJ_T0086437.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126177227 126343924 + MGP_BALBcJ_P0086437 D430042O09Rik protein_coding protein_coding MGP_BALBcJ_T0086438.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126177276 126231008 + MGP_BALBcJ_P0086438 D430042O09Rik protein_coding protein_coding MGP_BALBcJ_T0086439.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126255991 126331146 + D430042O09Rik protein_coding processed_transcript MGP_BALBcJ_T0086440.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126298669 126343917 + D430042O09Rik protein_coding retained_intron MGP_BALBcJ_T0086441.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126329827 126341370 + MGP_BALBcJ_P0086441 D430042O09Rik protein_coding protein_coding MGP_BALBcJ_T0086442.1 MGP_BALBcJ_G0032959.1 mouse_genomes_project 7 126334417 126337122 + D430042O09Rik protein_coding retained_intron MGP_BALBcJ_T0015849.1 MGP_BALBcJ_G0013946.1 mouse_genomes_project 7 98376969 98377209 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083963.1 MGP_BALBcJ_G0032242.1 mouse_genomes_project 7 45230243 45265938 - MGP_BALBcJ_P0083963 Grin2d protein_coding protein_coding MGP_BALBcJ_T0083964.1 MGP_BALBcJ_G0032242.1 mouse_genomes_project 7 45265189 45269658 - MGP_BALBcJ_P0083964 Grin2d protein_coding protein_coding MGP_BALBcJ_T0100076.1 MGP_BALBcJ_G0038112.1 mouse_genomes_project 7 83932754 83932912 + Gm22177 snRNA snRNA MGP_BALBcJ_T0102732.1 MGP_BALBcJ_G0040547.1 mouse_genomes_project 7 32510110 32510948 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087042.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128781104 128784574 - BC017158 protein_coding retained_intron MGP_BALBcJ_T0087043.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128781104 128807995 - MGP_BALBcJ_P0087043 BC017158 protein_coding protein_coding MGP_BALBcJ_T0087044.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128781832 128807933 - BC017158 protein_coding retained_intron MGP_BALBcJ_T0087045.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128781832 128807934 - BC017158 protein_coding retained_intron MGP_BALBcJ_T0087046.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128782051 128807920 - MGP_BALBcJ_P0087046 BC017158 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087047.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128785690 128807400 - BC017158 protein_coding retained_intron MGP_BALBcJ_T0087048.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128786026 128798523 - BC017158 protein_coding retained_intron MGP_BALBcJ_T0087049.1 MGP_BALBcJ_G0033064.1 mouse_genomes_project 7 128797782 128800433 - MGP_BALBcJ_P0087049 BC017158 protein_coding protein_coding MGP_BALBcJ_T0015886.1 MGP_BALBcJ_G0013983.1 mouse_genomes_project 7 126713900 126714148 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084092.1 MGP_BALBcJ_G0032284.1 mouse_genomes_project 7 48195949 48196958 - MGP_BALBcJ_P0084092 Mrgprb3 protein_coding protein_coding MGP_BALBcJ_T0085424.1 MGP_BALBcJ_G0032586.1 mouse_genomes_project 7 102108298 102140692 + MGP_BALBcJ_P0085424 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085425.1 MGP_BALBcJ_G0032586.1 mouse_genomes_project 7 102108298 102140244 + MGP_BALBcJ_P0085425 protein_coding protein_coding MGP_BALBcJ_T0085427.1 MGP_BALBcJ_G0032586.1 mouse_genomes_project 7 102108363 102140162 + MGP_BALBcJ_P0085427 protein_coding protein_coding MGP_BALBcJ_T0085428.1 MGP_BALBcJ_G0032586.1 mouse_genomes_project 7 102119259 102140162 + MGP_BALBcJ_P0085428 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085429.1 MGP_BALBcJ_G0032586.1 mouse_genomes_project 7 102119263 102140154 + MGP_BALBcJ_P0085429 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084244.1 MGP_BALBcJ_G0032317.1 mouse_genomes_project 7 61902898 61904550 + MGP_BALBcJ_P0084244 Ndn protein_coding protein_coding MGP_BALBcJ_T0086784.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127707598 127708292 - Sept1 protein_coding retained_intron MGP_BALBcJ_T0086785.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127707924 127711528 - MGP_BALBcJ_P0086785 Sept1 protein_coding protein_coding MGP_BALBcJ_T0086786.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127707937 127711590 - MGP_BALBcJ_P0086786 Sept1 protein_coding protein_coding MGP_BALBcJ_T0086787.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127708132 127710158 - Sept1 protein_coding retained_intron MGP_BALBcJ_T0086788.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127709051 127711509 - MGP_BALBcJ_P0086788 Sept1 protein_coding protein_coding MGP_BALBcJ_T0086789.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127709846 127726031 - MGP_BALBcJ_P0086789 Sept1 protein_coding protein_coding MGP_BALBcJ_T0086790.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127709883 127711545 - Sept1 protein_coding retained_intron MGP_BALBcJ_T0086791.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127710090 127711350 - Sept1 protein_coding processed_transcript MGP_BALBcJ_T0086792.1 MGP_BALBcJ_G0033014.1 mouse_genomes_project 7 127725802 127726515 - Sept1 protein_coding retained_intron MGP_BALBcJ_T0085846.1 MGP_BALBcJ_G0032827.1 mouse_genomes_project 7 109472117 109505276 - MGP_BALBcJ_P0085846 Lmo1 protein_coding protein_coding MGP_BALBcJ_T0086281.1 MGP_BALBcJ_G0032924.1 mouse_genomes_project 7 121428393 121453143 - Cdr2 protein_coding processed_transcript MGP_BALBcJ_T0086282.1 MGP_BALBcJ_G0032924.1 mouse_genomes_project 7 121428393 121453665 - MGP_BALBcJ_P0086282 Cdr2 protein_coding protein_coding MGP_BALBcJ_T0085621.1 MGP_BALBcJ_G0032708.1 mouse_genomes_project 7 104647727 104648718 + MGP_BALBcJ_P0085621 Olfr656 protein_coding protein_coding MGP_BALBcJ_T0082904.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28626913 28666280 - MGP_BALBcJ_P0082904 Wdr62 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082905.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28626913 28666303 - MGP_BALBcJ_P0082905 Wdr62 protein_coding protein_coding MGP_BALBcJ_T0082906.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28626913 28649350 - MGP_BALBcJ_P0082906 Wdr62 protein_coding protein_coding MGP_BALBcJ_T0082907.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28626918 28627659 - Wdr62 protein_coding processed_transcript MGP_BALBcJ_T0082908.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28628472 28629051 - MGP_BALBcJ_P0082908 Wdr62 protein_coding protein_coding MGP_BALBcJ_T0082909.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28632200 28638635 - Wdr62 protein_coding retained_intron MGP_BALBcJ_T0082910.1 MGP_BALBcJ_G0031993.1 mouse_genomes_project 7 28636599 28637343 - Wdr62 protein_coding retained_intron MGP_BALBcJ_T0087403.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140779053 140784671 - MGP_BALBcJ_P0087403 Fuom protein_coding protein_coding MGP_BALBcJ_T0087404.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140780794 140784674 - MGP_BALBcJ_P0087404 Fuom protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087405.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140781753 140784644 - MGP_BALBcJ_P0087405 Fuom protein_coding protein_coding MGP_BALBcJ_T0087406.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140781753 140784709 - MGP_BALBcJ_P0087406 Fuom protein_coding protein_coding MGP_BALBcJ_T0087407.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140781755 140782252 - Fuom protein_coding retained_intron MGP_BALBcJ_T0087408.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140781757 140784588 - Fuom protein_coding processed_transcript MGP_BALBcJ_T0087409.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140781777 140783528 - Fuom protein_coding retained_intron MGP_BALBcJ_T0087410.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140782172 140784612 - MGP_BALBcJ_P0087410 Fuom protein_coding protein_coding MGP_BALBcJ_T0087411.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140782840 140784674 - MGP_BALBcJ_P0087411 Fuom protein_coding protein_coding MGP_BALBcJ_T0087412.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140783386 140784574 - Fuom protein_coding processed_transcript MGP_BALBcJ_T0087413.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140783438 140784234 - Fuom protein_coding processed_transcript MGP_BALBcJ_T0087414.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140783447 140784674 - Fuom protein_coding retained_intron MGP_BALBcJ_T0087415.1 MGP_BALBcJ_G0033146.1 mouse_genomes_project 7 140783562 140784598 - Fuom protein_coding retained_intron MGP_BALBcJ_T0086996.1 MGP_BALBcJ_G0033053.1 mouse_genomes_project 7 128509795 128516880 + MGP_BALBcJ_P0086996 Trim72 protein_coding protein_coding MGP_BALBcJ_T0086997.1 MGP_BALBcJ_G0033053.1 mouse_genomes_project 7 128510224 128516523 + MGP_BALBcJ_P0086997 Trim72 protein_coding protein_coding MGP_BALBcJ_T0086168.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119301639 119316529 - MGP_BALBcJ_P0086168 Knop1 protein_coding protein_coding MGP_BALBcJ_T0086169.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119301639 119316529 - MGP_BALBcJ_P0086169 Knop1 protein_coding protein_coding MGP_BALBcJ_T0086170.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119301654 119316532 - MGP_BALBcJ_P0086170 Knop1 protein_coding protein_coding MGP_BALBcJ_T0086171.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119303207 119316215 - MGP_BALBcJ_P0086171 Knop1 protein_coding protein_coding MGP_BALBcJ_T0086172.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119304917 119316133 - MGP_BALBcJ_P0086172 Knop1 protein_coding protein_coding MGP_BALBcJ_T0086173.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119305171 119316785 - MGP_BALBcJ_P0086173 Knop1 protein_coding protein_coding MGP_BALBcJ_T0086174.1 MGP_BALBcJ_G0032893.1 mouse_genomes_project 7 119312172 119313698 - MGP_BALBcJ_P0086174 Knop1 protein_coding protein_coding MGP_BALBcJ_T0083195.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29555248 29576098 - Gramd1a protein_coding retained_intron MGP_BALBcJ_T0083196.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29555248 29576168 - MGP_BALBcJ_P0083196 Gramd1a protein_coding protein_coding MGP_BALBcJ_T0083197.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29555248 29576098 - MGP_BALBcJ_P0083197 Gramd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083198.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29555248 29576119 - MGP_BALBcJ_P0083198 Gramd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083199.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29555248 29576100 - MGP_BALBcJ_P0083199 Gramd1a protein_coding protein_coding MGP_BALBcJ_T0083200.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29557418 29558424 - Gramd1a protein_coding retained_intron MGP_BALBcJ_T0083201.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29557650 29563241 - MGP_BALBcJ_P0083201 Gramd1a protein_coding protein_coding MGP_BALBcJ_T0083202.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29557898 29568831 - MGP_BALBcJ_P0083202 Gramd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083203.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29560650 29564981 - MGP_BALBcJ_P0083203 Gramd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083204.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29564930 29576098 - MGP_BALBcJ_P0083204 Gramd1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083205.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29566126 29576039 - Gramd1a protein_coding retained_intron MGP_BALBcJ_T0083206.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29566234 29577155 - MGP_BALBcJ_P0083206 Gramd1a protein_coding protein_coding MGP_BALBcJ_T0083207.1 MGP_BALBcJ_G0032047.1 mouse_genomes_project 7 29567655 29580992 - MGP_BALBcJ_P0083207 Gramd1a protein_coding protein_coding MGP_BALBcJ_T0083918.1 MGP_BALBcJ_G0032232.1 mouse_genomes_project 7 45095805 45100873 + MGP_BALBcJ_P0083918 Dbp protein_coding protein_coding MGP_BALBcJ_T0083919.1 MGP_BALBcJ_G0032232.1 mouse_genomes_project 7 45096341 45100832 + MGP_BALBcJ_P0083919 Dbp protein_coding protein_coding MGP_BALBcJ_T0083920.1 MGP_BALBcJ_G0032232.1 mouse_genomes_project 7 45096341 45100832 + MGP_BALBcJ_P0083920 Dbp protein_coding protein_coding MGP_BALBcJ_T0083921.1 MGP_BALBcJ_G0032232.1 mouse_genomes_project 7 45097821 45100746 + Dbp protein_coding retained_intron MGP_BALBcJ_T0083922.1 MGP_BALBcJ_G0032232.1 mouse_genomes_project 7 45098606 45100614 + Dbp protein_coding retained_intron MGP_BALBcJ_T0002239.1 MGP_BALBcJ_G0002151.1 mouse_genomes_project 7 63894149 63894750 + TEC TEC MGP_BALBcJ_T0082859.1 MGP_BALBcJ_G0031978.1 mouse_genomes_project 7 28329877 28332233 + MGP_BALBcJ_P0082859 protein_coding protein_coding MGP_BALBcJ_T0081702.1 MGP_BALBcJ_G0031654.1 mouse_genomes_project 7 10904898 10920408 - MGP_BALBcJ_P0081702 Bsph2 protein_coding protein_coding MGP_BALBcJ_T0081703.1 MGP_BALBcJ_G0031654.1 mouse_genomes_project 7 10904900 10920408 - MGP_BALBcJ_P0081703 Bsph2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008777.1 MGP_BALBcJ_G0007086.1 mouse_genomes_project 7 468037 480853 - Gm44920 lincRNA lincRNA MGP_BALBcJ_T0018307.1 MGP_BALBcJ_G0015603.1 mouse_genomes_project 7 43595117 43613294 + Gm28496 processed_transcript processed_transcript MGP_BALBcJ_T0018308.1 MGP_BALBcJ_G0015603.1 mouse_genomes_project 7 43595165 43612462 + Gm28496 processed_transcript processed_transcript MGP_BALBcJ_T0085819.1 MGP_BALBcJ_G0032809.1 mouse_genomes_project 7 108749002 108749947 + MGP_BALBcJ_P0085819 Olfr497 protein_coding protein_coding MGP_BALBcJ_T0009030.1 MGP_BALBcJ_G0007265.1 mouse_genomes_project 7 134255931 134257308 - Gm28747 lincRNA lincRNA MGP_BALBcJ_T0102773.1 MGP_BALBcJ_G0040588.1 mouse_genomes_project 7 48175028 48175812 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085967.1 MGP_BALBcJ_G0032856.1 mouse_genomes_project 7 112597044 112731991 + MGP_BALBcJ_P0085967 Mical2 protein_coding protein_coding MGP_BALBcJ_T0085968.1 MGP_BALBcJ_G0032856.1 mouse_genomes_project 7 112597078 112725284 + MGP_BALBcJ_P0085968 Mical2 protein_coding protein_coding MGP_BALBcJ_T0085969.1 MGP_BALBcJ_G0032856.1 mouse_genomes_project 7 112597078 112692377 + MGP_BALBcJ_P0085969 Mical2 protein_coding protein_coding MGP_BALBcJ_T0085970.1 MGP_BALBcJ_G0032856.1 mouse_genomes_project 7 112642352 112730772 + MGP_BALBcJ_P0085970 Mical2 protein_coding protein_coding MGP_BALBcJ_T0085971.1 MGP_BALBcJ_G0032856.1 mouse_genomes_project 7 112692990 112724407 + Mical2 protein_coding retained_intron MGP_BALBcJ_T0085972.1 MGP_BALBcJ_G0032856.1 mouse_genomes_project 7 112723644 112731991 + MGP_BALBcJ_P0085972 Mical2 protein_coding protein_coding MGP_BALBcJ_T0098646.1 MGP_BALBcJ_G0036700.1 mouse_genomes_project 7 82505737 82505845 - n-R5s154 rRNA rRNA MGP_BALBcJ_T0008972.1 MGP_BALBcJ_G0007229.1 mouse_genomes_project 7 115367283 115404300 + A730082K24Rik lincRNA lincRNA MGP_BALBcJ_T0008973.1 MGP_BALBcJ_G0007229.1 mouse_genomes_project 7 115367321 115376977 + A730082K24Rik lincRNA lincRNA MGP_BALBcJ_T0008974.1 MGP_BALBcJ_G0007229.1 mouse_genomes_project 7 115370108 115394491 + A730082K24Rik lincRNA lincRNA MGP_BALBcJ_T0008975.1 MGP_BALBcJ_G0007229.1 mouse_genomes_project 7 115370123 115394472 + A730082K24Rik lincRNA lincRNA MGP_BALBcJ_T0008976.1 MGP_BALBcJ_G0007229.1 mouse_genomes_project 7 115370141 115403205 + A730082K24Rik lincRNA lincRNA MGP_BALBcJ_T0085780.1 MGP_BALBcJ_G0032777.1 mouse_genomes_project 7 107424067 107425197 - MGP_BALBcJ_P0085780 protein_coding protein_coding MGP_BALBcJ_T0101356.1 MGP_BALBcJ_G0039392.1 mouse_genomes_project 7 116776598 116776685 - Snord14a snoRNA snoRNA MGP_BALBcJ_T0082345.1 MGP_BALBcJ_G0031851.1 mouse_genomes_project 7 23440960 23457310 - MGP_BALBcJ_P0082345 Lipe protein_coding protein_coding MGP_BALBcJ_T0082346.1 MGP_BALBcJ_G0031851.1 mouse_genomes_project 7 23440972 23460396 - MGP_BALBcJ_P0082346 Lipe protein_coding protein_coding MGP_BALBcJ_T0082347.1 MGP_BALBcJ_G0031851.1 mouse_genomes_project 7 23444853 23446627 - MGP_BALBcJ_P0082347 Lipe protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082348.1 MGP_BALBcJ_G0031851.1 mouse_genomes_project 7 23444874 23445509 - Lipe protein_coding retained_intron MGP_BALBcJ_T0082349.1 MGP_BALBcJ_G0031851.1 mouse_genomes_project 7 23450261 23452178 - MGP_BALBcJ_P0082349 Lipe protein_coding protein_coding MGP_BALBcJ_T0082350.1 MGP_BALBcJ_G0031851.1 mouse_genomes_project 7 23459144 23460395 - MGP_BALBcJ_P0082350 Lipe protein_coding protein_coding MGP_BALBcJ_T0010880.1 MGP_BALBcJ_G0009005.1 mouse_genomes_project 7 73446906 73446958 + Mir7234 miRNA miRNA MGP_BALBcJ_T0083215.1 MGP_BALBcJ_G0032054.1 mouse_genomes_project 7 32550890 32552929 - MGP_BALBcJ_P0083215 Scgb2b26 protein_coding protein_coding MGP_BALBcJ_T0100105.1 MGP_BALBcJ_G0038141.1 mouse_genomes_project 7 130547950 130548060 + Gm23847 snRNA snRNA MGP_BALBcJ_T0085471.1 MGP_BALBcJ_G0032594.1 mouse_genomes_project 7 102326693 102496130 + MGP_BALBcJ_P0085471 Stim1 protein_coding protein_coding MGP_BALBcJ_T0086015.1 MGP_BALBcJ_G0032865.1 mouse_genomes_project 7 114105612 114106098 - MGP_BALBcJ_P0086015 protein_coding protein_coding MGP_BALBcJ_T0015809.1 MGP_BALBcJ_G0013906.1 mouse_genomes_project 7 73314994 73316104 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083507.1 MGP_BALBcJ_G0032121.1 mouse_genomes_project 7 42805675 42818881 + MGP_BALBcJ_P0083507 Zfp658 protein_coding protein_coding MGP_BALBcJ_T0083508.1 MGP_BALBcJ_G0032121.1 mouse_genomes_project 7 42808203 42818386 + MGP_BALBcJ_P0083508 Zfp658 protein_coding protein_coding MGP_BALBcJ_T0081883.1 MGP_BALBcJ_G0031714.1 mouse_genomes_project 7 15743897 15751702 + MGP_BALBcJ_P0081883 Ceacam13 protein_coding protein_coding MGP_BALBcJ_T0081884.1 MGP_BALBcJ_G0031714.1 mouse_genomes_project 7 15743897 15747495 + MGP_BALBcJ_P0081884 Ceacam13 protein_coding protein_coding MGP_BALBcJ_T0085024.1 MGP_BALBcJ_G0032501.1 mouse_genomes_project 7 92722301 92776841 + MGP_BALBcJ_P0085024 Prcp protein_coding protein_coding MGP_BALBcJ_T0083342.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341019 34396240 + MGP_BALBcJ_P0083342 protein_coding protein_coding MGP_BALBcJ_T0083343.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341025 34365389 + MGP_BALBcJ_P0083343 protein_coding protein_coding MGP_BALBcJ_T0083344.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341025 34357568 + MGP_BALBcJ_P0083344 protein_coding protein_coding MGP_BALBcJ_T0083345.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341030 34391571 + MGP_BALBcJ_P0083345 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083346.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341050 34396248 + MGP_BALBcJ_P0083346 protein_coding unknown_likely_coding MGP_BALBcJ_T0083347.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341050 34359816 + MGP_BALBcJ_P0083347 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083348.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34341052 34396240 + MGP_BALBcJ_P0083348 protein_coding protein_coding MGP_BALBcJ_T0083349.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34357350 34360285 + protein_coding retained_intron MGP_BALBcJ_T0083350.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34368059 34370974 + protein_coding retained_intron MGP_BALBcJ_T0083351.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34371876 34384488 + MGP_BALBcJ_P0083351 protein_coding protein_coding MGP_BALBcJ_T0083352.1 MGP_BALBcJ_G0032080.1 mouse_genomes_project 7 34375477 34383583 + MGP_BALBcJ_P0083352 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087337.1 MGP_BALBcJ_G0033128.1 mouse_genomes_project 7 139638215 139730418 + MGP_BALBcJ_P0087337 Jakmip3 protein_coding protein_coding MGP_BALBcJ_T0087338.1 MGP_BALBcJ_G0033128.1 mouse_genomes_project 7 139638235 139730412 + MGP_BALBcJ_P0087338 Jakmip3 protein_coding protein_coding MGP_BALBcJ_T0087339.1 MGP_BALBcJ_G0033128.1 mouse_genomes_project 7 139684716 139747819 + MGP_BALBcJ_P0087339 Jakmip3 protein_coding unknown_likely_coding MGP_BALBcJ_T0087340.1 MGP_BALBcJ_G0033128.1 mouse_genomes_project 7 139746150 139766255 + MGP_BALBcJ_P0087340 Jakmip3 protein_coding protein_coding MGP_BALBcJ_T0015872.1 MGP_BALBcJ_G0013969.1 mouse_genomes_project 7 115585224 115585564 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084534.1 MGP_BALBcJ_G0032375.1 mouse_genomes_project 7 78816525 78832083 - MGP_BALBcJ_P0084534 Hapln3 protein_coding protein_coding MGP_BALBcJ_T0084535.1 MGP_BALBcJ_G0032375.1 mouse_genomes_project 7 78817161 78832060 - MGP_BALBcJ_P0084535 Hapln3 protein_coding protein_coding MGP_BALBcJ_T0084536.1 MGP_BALBcJ_G0032375.1 mouse_genomes_project 7 78818444 78832078 - MGP_BALBcJ_P0084536 Hapln3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084537.1 MGP_BALBcJ_G0032375.1 mouse_genomes_project 7 78823178 78829728 - Hapln3 protein_coding processed_transcript MGP_BALBcJ_T0084157.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333013 55337332 + MGP_BALBcJ_P0084157 Siglech protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084158.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333019 55338285 + MGP_BALBcJ_P0084158 Siglech protein_coding protein_coding MGP_BALBcJ_T0084159.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333019 55338285 + MGP_BALBcJ_P0084159 Siglech protein_coding protein_coding MGP_BALBcJ_T0084160.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333061 55343648 + MGP_BALBcJ_P0084160 Siglech protein_coding protein_coding MGP_BALBcJ_T0084161.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333061 55343437 + MGP_BALBcJ_P0084161 Siglech protein_coding protein_coding MGP_BALBcJ_T0084162.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333071 55342421 + MGP_BALBcJ_P0084162 Siglech protein_coding protein_coding MGP_BALBcJ_T0084163.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333071 55342375 + MGP_BALBcJ_P0084163 Siglech protein_coding protein_coding MGP_BALBcJ_T0084164.1 MGP_BALBcJ_G0032302.1 mouse_genomes_project 7 55333096 55343740 + MGP_BALBcJ_P0084164 Siglech protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008776.1 MGP_BALBcJ_G0007085.1 mouse_genomes_project 7 362002 387088 + Gm44160 lincRNA lincRNA MGP_BALBcJ_T0086052.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115890603 116455332 - MGP_BALBcJ_P0086052 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086053.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115891075 116463195 - MGP_BALBcJ_P0086053 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086054.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115891075 116415306 - MGP_BALBcJ_P0086054 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086055.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115891075 116455332 - MGP_BALBcJ_P0086055 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086056.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115894186 116242352 - MGP_BALBcJ_P0086056 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086057.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115896390 116263821 - MGP_BALBcJ_P0086057 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086058.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115896390 116263786 - MGP_BALBcJ_P0086058 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086059.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115896403 116415306 - MGP_BALBcJ_P0086059 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086060.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115935906 116458047 - Sox6 protein_coding retained_intron MGP_BALBcJ_T0086061.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115936340 116016135 - Sox6 protein_coding processed_transcript MGP_BALBcJ_T0086062.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 115961941 116463247 - Sox6 protein_coding retained_intron MGP_BALBcJ_T0086063.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 116004191 116081875 - MGP_BALBcJ_P0086063 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086064.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 116015468 116081875 - Sox6 protein_coding retained_intron MGP_BALBcJ_T0086065.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 116202355 116277335 - MGP_BALBcJ_P0086065 Sox6 protein_coding protein_coding MGP_BALBcJ_T0086066.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 116226810 116458958 - Sox6 protein_coding processed_transcript MGP_BALBcJ_T0086067.1 MGP_BALBcJ_G0032875.1 mouse_genomes_project 7 116261852 116263832 - Sox6 protein_coding retained_intron MGP_BALBcJ_T0085612.1 MGP_BALBcJ_G0032702.1 mouse_genomes_project 7 104527143 104553037 - MGP_BALBcJ_P0085612 Trim30d protein_coding protein_coding MGP_BALBcJ_T0085613.1 MGP_BALBcJ_G0032702.1 mouse_genomes_project 7 104528975 104553014 - MGP_BALBcJ_P0085613 Trim30d protein_coding protein_coding MGP_BALBcJ_T0085614.1 MGP_BALBcJ_G0032702.1 mouse_genomes_project 7 104529354 104537795 - MGP_BALBcJ_P0085614 Trim30d protein_coding protein_coding MGP_BALBcJ_T0010805.1 MGP_BALBcJ_G0008930.1 mouse_genomes_project 7 118111 118169 - Mir290b miRNA miRNA MGP_BALBcJ_T0087132.1 MGP_BALBcJ_G0033075.1 mouse_genomes_project 7 131054148 131069882 - MGP_BALBcJ_P0087132 Nsmce4a protein_coding protein_coding MGP_BALBcJ_T0087133.1 MGP_BALBcJ_G0033075.1 mouse_genomes_project 7 131054158 131058194 - Nsmce4a protein_coding retained_intron MGP_BALBcJ_T0087134.1 MGP_BALBcJ_G0033075.1 mouse_genomes_project 7 131056044 131096653 - MGP_BALBcJ_P0087134 Nsmce4a protein_coding protein_coding MGP_BALBcJ_T0087135.1 MGP_BALBcJ_G0033075.1 mouse_genomes_project 7 131057769 131061728 - Nsmce4a protein_coding retained_intron MGP_BALBcJ_T0087136.1 MGP_BALBcJ_G0033075.1 mouse_genomes_project 7 131059203 131068455 - MGP_BALBcJ_P0087136 Nsmce4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087137.1 MGP_BALBcJ_G0033075.1 mouse_genomes_project 7 131061928 131065012 - Nsmce4a protein_coding retained_intron MGP_BALBcJ_T0082084.1 MGP_BALBcJ_G0031775.1 mouse_genomes_project 7 17572490 17607113 - MGP_BALBcJ_P0082084 Nectin2 protein_coding protein_coding MGP_BALBcJ_T0082085.1 MGP_BALBcJ_G0031775.1 mouse_genomes_project 7 17580809 17607113 - MGP_BALBcJ_P0082085 Nectin2 protein_coding protein_coding MGP_BALBcJ_T0084084.1 MGP_BALBcJ_G0032279.1 mouse_genomes_project 7 47773363 47774582 - MGP_BALBcJ_P0084084 Mrgprb4 protein_coding protein_coding MGP_BALBcJ_T0086019.1 MGP_BALBcJ_G0032868.1 mouse_genomes_project 7 114626402 114664976 - MGP_BALBcJ_P0086019 Copb1 protein_coding protein_coding MGP_BALBcJ_T0081811.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14367306 14387187 + MGP_BALBcJ_P0081811 Slc1a5 protein_coding protein_coding MGP_BALBcJ_T0081812.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14367334 14387187 + Slc1a5 protein_coding retained_intron MGP_BALBcJ_T0081813.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14368364 14375003 + Slc1a5 protein_coding retained_intron MGP_BALBcJ_T0081814.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14370703 14382600 + Slc1a5 protein_coding processed_transcript MGP_BALBcJ_T0081815.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14373484 14374992 + Slc1a5 protein_coding retained_intron MGP_BALBcJ_T0081816.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14374194 14382690 + Slc1a5 protein_coding retained_intron MGP_BALBcJ_T0081817.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14381920 14385068 + Slc1a5 protein_coding processed_transcript MGP_BALBcJ_T0081818.1 MGP_BALBcJ_G0031695.1 mouse_genomes_project 7 14382070 14384837 + Slc1a5 protein_coding retained_intron MGP_BALBcJ_T0015817.1 MGP_BALBcJ_G0013914.1 mouse_genomes_project 7 75456352 75456704 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010878.1 MGP_BALBcJ_G0009003.1 mouse_genomes_project 7 64529768 64529846 - Gm25249 miRNA miRNA MGP_BALBcJ_T0083415.1 MGP_BALBcJ_G0032092.1 mouse_genomes_project 7 39861555 39896306 + MGP_BALBcJ_P0083415 Vstm2b protein_coding protein_coding MGP_BALBcJ_T0083416.1 MGP_BALBcJ_G0032092.1 mouse_genomes_project 7 39863601 39895680 + MGP_BALBcJ_P0083416 Vstm2b protein_coding protein_coding MGP_BALBcJ_T0083417.1 MGP_BALBcJ_G0032092.1 mouse_genomes_project 7 39863655 39867105 + MGP_BALBcJ_P0083417 Vstm2b protein_coding protein_coding MGP_BALBcJ_T0083418.1 MGP_BALBcJ_G0032092.1 mouse_genomes_project 7 39864449 39867118 + MGP_BALBcJ_P0083418 Vstm2b protein_coding protein_coding MGP_BALBcJ_T0083818.1 MGP_BALBcJ_G0032207.1 mouse_genomes_project 7 44742355 44745048 - MGP_BALBcJ_P0083818 Lin7b protein_coding protein_coding MGP_BALBcJ_T0083819.1 MGP_BALBcJ_G0032207.1 mouse_genomes_project 7 44742357 44743067 - Lin7b protein_coding retained_intron MGP_BALBcJ_T0083820.1 MGP_BALBcJ_G0032207.1 mouse_genomes_project 7 44743674 44744780 - Lin7b protein_coding retained_intron MGP_BALBcJ_T0083821.1 MGP_BALBcJ_G0032207.1 mouse_genomes_project 7 44743728 44744650 - Lin7b protein_coding retained_intron MGP_BALBcJ_T0083822.1 MGP_BALBcJ_G0032207.1 mouse_genomes_project 7 44744027 44744811 - Lin7b protein_coding retained_intron MGP_BALBcJ_T0082234.1 MGP_BALBcJ_G0031828.1 mouse_genomes_project 7 22812687 22822717 + MGP_BALBcJ_P0082234 Ceacam10 protein_coding protein_coding MGP_BALBcJ_T0082235.1 MGP_BALBcJ_G0031828.1 mouse_genomes_project 7 22812691 22822713 + MGP_BALBcJ_P0082235 Ceacam10 protein_coding protein_coding MGP_BALBcJ_T0082236.1 MGP_BALBcJ_G0031828.1 mouse_genomes_project 7 22812744 22822718 + MGP_BALBcJ_P0082236 Ceacam10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082237.1 MGP_BALBcJ_G0031828.1 mouse_genomes_project 7 22822073 22822717 + Ceacam10 protein_coding retained_intron MGP_BALBcJ_T0082006.1 MGP_BALBcJ_G0031753.1 mouse_genomes_project 7 17203326 17206440 - MGP_BALBcJ_P0082006 Cd3eap protein_coding protein_coding MGP_BALBcJ_T0082007.1 MGP_BALBcJ_G0031753.1 mouse_genomes_project 7 17205321 17206442 - Cd3eap protein_coding retained_intron MGP_BALBcJ_T0102796.1 MGP_BALBcJ_G0040611.1 mouse_genomes_project 7 85777581 85777958 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081854.1 MGP_BALBcJ_G0031702.1 mouse_genomes_project 7 14504478 14513227 - MGP_BALBcJ_P0081854 Calm3 protein_coding protein_coding MGP_BALBcJ_T0081855.1 MGP_BALBcJ_G0031702.1 mouse_genomes_project 7 14504500 14506276 - MGP_BALBcJ_P0081855 Calm3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081856.1 MGP_BALBcJ_G0031702.1 mouse_genomes_project 7 14505034 14506314 - MGP_BALBcJ_P0081856 Calm3 protein_coding protein_coding MGP_BALBcJ_T0081857.1 MGP_BALBcJ_G0031702.1 mouse_genomes_project 7 14506254 14512942 - Calm3 protein_coding processed_transcript MGP_BALBcJ_T0015819.1 MGP_BALBcJ_G0013916.1 mouse_genomes_project 7 79116624 79116832 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082782.1 MGP_BALBcJ_G0031960.1 mouse_genomes_project 7 27506514 27512771 - MGP_BALBcJ_P0082782 Psmd8 protein_coding protein_coding MGP_BALBcJ_T0082783.1 MGP_BALBcJ_G0031960.1 mouse_genomes_project 7 27506514 27512892 - MGP_BALBcJ_P0082783 Psmd8 protein_coding protein_coding MGP_BALBcJ_T0082784.1 MGP_BALBcJ_G0031960.1 mouse_genomes_project 7 27506514 27512920 - MGP_BALBcJ_P0082784 Psmd8 protein_coding protein_coding MGP_BALBcJ_T0083051.1 MGP_BALBcJ_G0032022.1 mouse_genomes_project 7 29066850 29067729 - MGP_BALBcJ_P0083051 Pmis2 protein_coding protein_coding MGP_BALBcJ_T0083052.1 MGP_BALBcJ_G0032022.1 mouse_genomes_project 7 29066885 29067724 - Pmis2 protein_coding processed_transcript MGP_BALBcJ_T0085835.1 MGP_BALBcJ_G0032824.1 mouse_genomes_project 7 109268493 109277028 + MGP_BALBcJ_P0085835 Eif3f protein_coding protein_coding MGP_BALBcJ_T0085836.1 MGP_BALBcJ_G0032824.1 mouse_genomes_project 7 109272471 109274553 + Eif3f protein_coding retained_intron MGP_BALBcJ_T0085837.1 MGP_BALBcJ_G0032824.1 mouse_genomes_project 7 109274384 109275085 + Eif3f protein_coding retained_intron MGP_BALBcJ_T0085561.1 MGP_BALBcJ_G0032677.1 mouse_genomes_project 7 104156861 104278613 - MGP_BALBcJ_P0085561 protein_coding protein_coding MGP_BALBcJ_T0085875.1 MGP_BALBcJ_G0032836.1 mouse_genomes_project 7 110102398 110125834 - MGP_BALBcJ_P0085875 Nrip3 protein_coding protein_coding MGP_BALBcJ_T0085876.1 MGP_BALBcJ_G0032836.1 mouse_genomes_project 7 110102402 110125354 - MGP_BALBcJ_P0085876 Nrip3 protein_coding protein_coding MGP_BALBcJ_T0084603.1 MGP_BALBcJ_G0032385.1 mouse_genomes_project 7 79445179 79452302 - MGP_BALBcJ_P0084603 Pex11a protein_coding protein_coding MGP_BALBcJ_T0084604.1 MGP_BALBcJ_G0032385.1 mouse_genomes_project 7 79446311 79452353 - Pex11a protein_coding processed_transcript MGP_BALBcJ_T0084605.1 MGP_BALBcJ_G0032385.1 mouse_genomes_project 7 79446472 79447946 - Pex11a protein_coding retained_intron MGP_BALBcJ_T0084606.1 MGP_BALBcJ_G0032385.1 mouse_genomes_project 7 79446993 79449578 - Pex11a protein_coding retained_intron MGP_BALBcJ_T0084073.1 MGP_BALBcJ_G0032271.1 mouse_genomes_project 7 46486121 46490282 + MGP_BALBcJ_P0084073 Tmem86a protein_coding protein_coding MGP_BALBcJ_T0015779.1 MGP_BALBcJ_G0013876.1 mouse_genomes_project 7 43650322 43651296 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083479.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42685785 42699478 + MGP_BALBcJ_P0083479 Etfb protein_coding protein_coding MGP_BALBcJ_T0083480.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42685821 42699342 + MGP_BALBcJ_P0083480 Etfb protein_coding protein_coding MGP_BALBcJ_T0083482.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42685832 42698251 + MGP_BALBcJ_P0083482 Etfb protein_coding protein_coding MGP_BALBcJ_T0083484.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42685852 42699459 + MGP_BALBcJ_P0083484 Etfb protein_coding protein_coding MGP_BALBcJ_T0083485.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42694567 42699459 + MGP_BALBcJ_P0083485 Etfb protein_coding protein_coding MGP_BALBcJ_T0083486.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42698178 42699458 + Etfb protein_coding processed_transcript MGP_BALBcJ_T0083487.1 MGP_BALBcJ_G0032115.1 mouse_genomes_project 7 42698713 42699461 + Etfb protein_coding processed_transcript MGP_BALBcJ_T0101322.1 MGP_BALBcJ_G0039358.1 mouse_genomes_project 7 57548982 57549116 + Gm23911 snoRNA snoRNA MGP_BALBcJ_T0082811.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27693062 27751391 - MGP_BALBcJ_P0082811 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082812.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27693068 27727925 - Sipa1l3 protein_coding retained_intron MGP_BALBcJ_T0082813.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27693068 27878639 - MGP_BALBcJ_P0082813 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082814.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27693068 27878639 - MGP_BALBcJ_P0082814 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082815.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27694022 27727847 - Sipa1l3 protein_coding retained_intron MGP_BALBcJ_T0082816.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27694515 27701981 - MGP_BALBcJ_P0082816 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082817.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27694810 27741605 - MGP_BALBcJ_P0082817 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082818.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27696084 27714881 - Sipa1l3 protein_coding retained_intron MGP_BALBcJ_T0082819.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27704096 27712074 - Sipa1l3 protein_coding retained_intron MGP_BALBcJ_T0082820.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27739371 27741078 - Sipa1l3 protein_coding retained_intron MGP_BALBcJ_T0082821.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27740490 27741613 - MGP_BALBcJ_P0082821 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082822.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27744573 27751531 - Sipa1l3 protein_coding retained_intron MGP_BALBcJ_T0082823.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27758041 27878631 - Sipa1l3 protein_coding processed_transcript MGP_BALBcJ_T0082824.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27774293 27891968 - MGP_BALBcJ_P0082824 Sipa1l3 protein_coding protein_coding MGP_BALBcJ_T0082825.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27774398 27891997 - Sipa1l3 protein_coding processed_transcript MGP_BALBcJ_T0082826.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27774471 27891971 - Sipa1l3 protein_coding processed_transcript MGP_BALBcJ_T0082827.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27867977 27891916 - Sipa1l3 protein_coding processed_transcript MGP_BALBcJ_T0082828.1 MGP_BALBcJ_G0031968.1 mouse_genomes_project 7 27890126 27891911 - Sipa1l3 protein_coding processed_transcript MGP_BALBcJ_T0008775.1 MGP_BALBcJ_G0007084.1 mouse_genomes_project 7 332167 333930 - 3300002P13Rik lincRNA lincRNA MGP_BALBcJ_T0008910.1 MGP_BALBcJ_G0007193.1 mouse_genomes_project 7 75439923 75442932 - AU020206 lincRNA lincRNA MGP_BALBcJ_T0008911.1 MGP_BALBcJ_G0007193.1 mouse_genomes_project 7 75440647 75454589 - AU020206 lincRNA lincRNA MGP_BALBcJ_T0099017.1 MGP_BALBcJ_G0037059.1 mouse_genomes_project 7 130178301 130204243 + Gm33248 sense_intronic sense_intronic MGP_BALBcJ_T0085109.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 97973023 98043589 - MGP_BALBcJ_P0085109 Myo7a protein_coding protein_coding MGP_BALBcJ_T0085110.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 97973026 97991268 - MGP_BALBcJ_P0085110 Myo7a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085111.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 97973364 98032631 - MGP_BALBcJ_P0085111 Myo7a protein_coding protein_coding MGP_BALBcJ_T0085112.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 97973590 98043365 - MGP_BALBcJ_P0085112 Myo7a protein_coding protein_coding MGP_BALBcJ_T0085113.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 97984540 97987104 - Myo7a protein_coding retained_intron MGP_BALBcJ_T0085114.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 98003456 98007643 - Myo7a protein_coding processed_transcript MGP_BALBcJ_T0085115.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 98021039 98036010 - Myo7a protein_coding processed_transcript MGP_BALBcJ_T0085116.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 98021614 98026770 - Myo7a protein_coding processed_transcript MGP_BALBcJ_T0085117.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 98021654 98026769 - Myo7a protein_coding processed_transcript MGP_BALBcJ_T0085118.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 98021663 98043558 - MGP_BALBcJ_P0085118 Myo7a protein_coding protein_coding MGP_BALBcJ_T0085119.1 MGP_BALBcJ_G0032518.1 mouse_genomes_project 7 98032115 98043557 - Myo7a protein_coding processed_transcript MGP_BALBcJ_T0081960.1 MGP_BALBcJ_G0031739.1 mouse_genomes_project 7 16928181 16932136 + MGP_BALBcJ_P0081960 Six5 protein_coding protein_coding MGP_BALBcJ_T0015760.1 MGP_BALBcJ_G0013857.1 mouse_genomes_project 7 40265493 40267068 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081926.1 MGP_BALBcJ_G0031733.1 mouse_genomes_project 7 16835894 16838630 + MGP_BALBcJ_P0081926 Irf2bp1 protein_coding protein_coding MGP_BALBcJ_T0085618.1 MGP_BALBcJ_G0032705.1 mouse_genomes_project 7 104606575 104607621 + MGP_BALBcJ_P0085618 Olfr653 protein_coding protein_coding MGP_BALBcJ_T0083332.1 MGP_BALBcJ_G0032077.1 mouse_genomes_project 7 34222053 34291874 - MGP_BALBcJ_P0083332 protein_coding protein_coding MGP_BALBcJ_T0083333.1 MGP_BALBcJ_G0032077.1 mouse_genomes_project 7 34224146 34291875 - MGP_BALBcJ_P0083333 protein_coding protein_coding MGP_BALBcJ_T0083334.1 MGP_BALBcJ_G0032077.1 mouse_genomes_project 7 34247357 34292030 - MGP_BALBcJ_P0083334 protein_coding protein_coding MGP_BALBcJ_T0083335.1 MGP_BALBcJ_G0032077.1 mouse_genomes_project 7 34247360 34292082 - MGP_BALBcJ_P0083335 protein_coding protein_coding MGP_BALBcJ_T0083336.1 MGP_BALBcJ_G0032077.1 mouse_genomes_project 7 34247389 34258757 - MGP_BALBcJ_P0083336 protein_coding protein_coding MGP_BALBcJ_T0083337.1 MGP_BALBcJ_G0032077.1 mouse_genomes_project 7 34262525 34292030 - MGP_BALBcJ_P0083337 protein_coding protein_coding MGP_BALBcJ_T0085531.1 MGP_BALBcJ_G0032650.1 mouse_genomes_project 7 103642180 103643128 - MGP_BALBcJ_P0085531 Olfr610 protein_coding protein_coding MGP_BALBcJ_T0100090.1 MGP_BALBcJ_G0038126.1 mouse_genomes_project 7 110350156 110350297 + Gm23100 snRNA snRNA MGP_BALBcJ_T0083777.1 MGP_BALBcJ_G0032197.1 mouse_genomes_project 7 44550306 44553814 - MGP_BALBcJ_P0083777 Gfy protein_coding protein_coding MGP_BALBcJ_T0082294.1 MGP_BALBcJ_G0031839.1 mouse_genomes_project 7 23116844 23121288 + Zfp574 protein_coding processed_transcript MGP_BALBcJ_T0082295.1 MGP_BALBcJ_G0031839.1 mouse_genomes_project 7 23116923 23121647 + Zfp574 protein_coding processed_transcript MGP_BALBcJ_T0082296.1 MGP_BALBcJ_G0031839.1 mouse_genomes_project 7 23121476 23127764 + MGP_BALBcJ_P0082296 Zfp574 protein_coding protein_coding MGP_BALBcJ_T0082297.1 MGP_BALBcJ_G0031839.1 mouse_genomes_project 7 23121555 23126752 + MGP_BALBcJ_P0082297 Zfp574 protein_coding protein_coding MGP_BALBcJ_T0084871.1 MGP_BALBcJ_G0032441.1 mouse_genomes_project 7 83408605 83421274 - Il16 protein_coding retained_intron MGP_BALBcJ_T0084872.1 MGP_BALBcJ_G0032441.1 mouse_genomes_project 7 83408821 83497376 - MGP_BALBcJ_P0084872 Il16 protein_coding protein_coding MGP_BALBcJ_T0084873.1 MGP_BALBcJ_G0032441.1 mouse_genomes_project 7 83415350 83421104 - Il16 protein_coding retained_intron MGP_BALBcJ_T0084874.1 MGP_BALBcJ_G0032441.1 mouse_genomes_project 7 83426678 83507978 - MGP_BALBcJ_P0084874 Il16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084875.1 MGP_BALBcJ_G0032441.1 mouse_genomes_project 7 83484350 83494246 - MGP_BALBcJ_P0084875 Il16 protein_coding protein_coding MGP_BALBcJ_T0084876.1 MGP_BALBcJ_G0032441.1 mouse_genomes_project 7 83484350 83502168 - MGP_BALBcJ_P0084876 Il16 protein_coding protein_coding MGP_BALBcJ_T0082590.1 MGP_BALBcJ_G0031908.1 mouse_genomes_project 7 26099633 26122430 + MGP_BALBcJ_P0082590 Zfp59 protein_coding protein_coding MGP_BALBcJ_T0081448.1 MGP_BALBcJ_G0031544.1 mouse_genomes_project 7 1765157 1770257 - MGP_BALBcJ_P0081448 Tmem238 protein_coding protein_coding MGP_BALBcJ_T0081449.1 MGP_BALBcJ_G0031544.1 mouse_genomes_project 7 1765772 1769674 - MGP_BALBcJ_P0081449 Tmem238 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100102.1 MGP_BALBcJ_G0038138.1 mouse_genomes_project 7 127572002 127572109 + Gm22747 snRNA snRNA MGP_BALBcJ_T0102668.1 MGP_BALBcJ_G0040483.1 mouse_genomes_project 7 169237 170081 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085538.1 MGP_BALBcJ_G0032657.1 mouse_genomes_project 7 103769784 103770738 - MGP_BALBcJ_P0085538 Olfr622 protein_coding protein_coding MGP_BALBcJ_T0081572.1 MGP_BALBcJ_G0031603.1 mouse_genomes_project 7 7339397 7362919 - MGP_BALBcJ_P0081572 protein_coding protein_coding MGP_BALBcJ_T0085497.1 MGP_BALBcJ_G0032618.1 mouse_genomes_project 7 102960893 102961838 - MGP_BALBcJ_P0085497 Olfr569 protein_coding protein_coding MGP_BALBcJ_T0082181.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22408816 22417454 + Smg9 protein_coding retained_intron MGP_BALBcJ_T0082182.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22408816 22431921 + MGP_BALBcJ_P0082182 Smg9 protein_coding protein_coding MGP_BALBcJ_T0082183.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22408921 22415032 + Smg9 protein_coding retained_intron MGP_BALBcJ_T0082184.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22409118 22416744 + MGP_BALBcJ_P0082184 Smg9 protein_coding protein_coding MGP_BALBcJ_T0082185.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22423915 22430073 + Smg9 protein_coding retained_intron MGP_BALBcJ_T0082186.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22424157 22430073 + MGP_BALBcJ_P0082186 Smg9 protein_coding protein_coding MGP_BALBcJ_T0082187.1 MGP_BALBcJ_G0031812.1 mouse_genomes_project 7 22429349 22431782 + Smg9 protein_coding retained_intron MGP_BALBcJ_T0005114.1 MGP_BALBcJ_G0004366.1 mouse_genomes_project 7 1047025 1094059 - 9430041J12Rik antisense antisense MGP_BALBcJ_T0005115.1 MGP_BALBcJ_G0004366.1 mouse_genomes_project 7 1047055 1093765 - 9430041J12Rik antisense antisense MGP_BALBcJ_T0005116.1 MGP_BALBcJ_G0004366.1 mouse_genomes_project 7 1047364 1093765 - 9430041J12Rik antisense antisense MGP_BALBcJ_T0005117.1 MGP_BALBcJ_G0004366.1 mouse_genomes_project 7 1093227 1093765 - 9430041J12Rik antisense pseudogene MGP_BALBcJ_T0082176.1 MGP_BALBcJ_G0031811.1 mouse_genomes_project 7 22377101 22391399 + MGP_BALBcJ_P0082176 Kcnn4 protein_coding protein_coding MGP_BALBcJ_T0082177.1 MGP_BALBcJ_G0031811.1 mouse_genomes_project 7 22377137 22391395 + MGP_BALBcJ_P0082177 Kcnn4 protein_coding protein_coding MGP_BALBcJ_T0082178.1 MGP_BALBcJ_G0031811.1 mouse_genomes_project 7 22377176 22390953 + MGP_BALBcJ_P0082178 Kcnn4 protein_coding protein_coding MGP_BALBcJ_T0082179.1 MGP_BALBcJ_G0031811.1 mouse_genomes_project 7 22388324 22390983 + Kcnn4 protein_coding retained_intron MGP_BALBcJ_T0082180.1 MGP_BALBcJ_G0031811.1 mouse_genomes_project 7 22389248 22392903 + Kcnn4 protein_coding retained_intron MGP_BALBcJ_T0010856.1 MGP_BALBcJ_G0008981.1 mouse_genomes_project 7 57108368 57108470 + Mir6389 miRNA miRNA MGP_BALBcJ_T0084610.1 MGP_BALBcJ_G0032389.1 mouse_genomes_project 7 79533317 79558032 - MGP_BALBcJ_P0084610 Anpep protein_coding protein_coding MGP_BALBcJ_T0084611.1 MGP_BALBcJ_G0032389.1 mouse_genomes_project 7 79533318 79537014 - Anpep protein_coding retained_intron MGP_BALBcJ_T0084612.1 MGP_BALBcJ_G0032389.1 mouse_genomes_project 7 79533318 79552186 - MGP_BALBcJ_P0084612 Anpep protein_coding protein_coding MGP_BALBcJ_T0084613.1 MGP_BALBcJ_G0032389.1 mouse_genomes_project 7 79533778 79558005 - MGP_BALBcJ_P0084613 Anpep protein_coding protein_coding MGP_BALBcJ_T0084614.1 MGP_BALBcJ_G0032389.1 mouse_genomes_project 7 79551889 79570757 - MGP_BALBcJ_P0084614 Anpep protein_coding protein_coding MGP_BALBcJ_T0084615.1 MGP_BALBcJ_G0032389.1 mouse_genomes_project 7 79552447 79558015 - Anpep protein_coding processed_transcript MGP_BALBcJ_T0102697.1 MGP_BALBcJ_G0040512.1 mouse_genomes_project 7 11567877 11573443 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087618.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168839 142176988 - MGP_BALBcJ_P0087618 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087619.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168844 142176923 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087620.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168844 142176727 - MGP_BALBcJ_P0087620 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087621.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168844 142173690 - MGP_BALBcJ_P0087621 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087622.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168844 142176733 - MGP_BALBcJ_P0087622 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087623.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168847 142174437 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087624.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168847 142176734 - MGP_BALBcJ_P0087624 Slc25a22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087625.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142168851 142171849 - MGP_BALBcJ_P0087625 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087626.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170049 142171134 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087627.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170115 142171155 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087628.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170281 142170694 - MGP_BALBcJ_P0087628 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087629.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170463 142171944 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087630.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170671 142174493 - MGP_BALBcJ_P0087630 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087631.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170721 142173519 - MGP_BALBcJ_P0087631 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087632.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170734 142173411 - MGP_BALBcJ_P0087632 Slc25a22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087633.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170738 142173103 - MGP_BALBcJ_P0087633 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087634.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142170988 142173066 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087635.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142171002 142176689 - MGP_BALBcJ_P0087635 Slc25a22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087636.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142171140 142174419 - Slc25a22 protein_coding processed_transcript MGP_BALBcJ_T0087637.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142171206 142176688 - MGP_BALBcJ_P0087637 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087638.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142171680 142174420 - Slc25a22 protein_coding retained_intron MGP_BALBcJ_T0087639.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142171796 142173696 - MGP_BALBcJ_P0087639 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087640.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142172692 142173700 - MGP_BALBcJ_P0087640 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087641.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142173025 142173639 - MGP_BALBcJ_P0087641 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0087642.1 MGP_BALBcJ_G0033212.1 mouse_genomes_project 7 142173057 142173690 - MGP_BALBcJ_P0087642 Slc25a22 protein_coding protein_coding MGP_BALBcJ_T0083519.1 MGP_BALBcJ_G0032126.1 mouse_genomes_project 7 42916878 42923112 + MGP_BALBcJ_P0083519 Ctu1 protein_coding protein_coding MGP_BALBcJ_T0084321.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65264269 65277137 + MGP_BALBcJ_P0084321 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084322.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266506 65277128 + MGP_BALBcJ_P0084322 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084323.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266515 65277139 + MGP_BALBcJ_P0084323 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084324.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266545 65273557 + MGP_BALBcJ_P0084324 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084325.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266565 65273704 + MGP_BALBcJ_P0084325 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084326.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266574 65277126 + MGP_BALBcJ_P0084326 Tm2d3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084327.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266575 65277128 + MGP_BALBcJ_P0084327 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084328.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266579 65268326 + MGP_BALBcJ_P0084328 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084329.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266622 65273699 + MGP_BALBcJ_P0084329 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0084330.1 MGP_BALBcJ_G0032335.1 mouse_genomes_project 7 65266622 65274997 + MGP_BALBcJ_P0084330 Tm2d3 protein_coding protein_coding MGP_BALBcJ_T0082893.1 MGP_BALBcJ_G0031990.1 mouse_genomes_project 7 28611030 28619005 - MGP_BALBcJ_P0082893 Tbcb protein_coding protein_coding MGP_BALBcJ_T0082894.1 MGP_BALBcJ_G0031990.1 mouse_genomes_project 7 28611032 28613968 - Tbcb protein_coding processed_transcript MGP_BALBcJ_T0082895.1 MGP_BALBcJ_G0031990.1 mouse_genomes_project 7 28611036 28614029 - Tbcb protein_coding retained_intron MGP_BALBcJ_T0085500.1 MGP_BALBcJ_G0032621.1 mouse_genomes_project 7 103001194 103002151 + MGP_BALBcJ_P0085500 Olfr572 protein_coding protein_coding MGP_BALBcJ_T0085808.1 MGP_BALBcJ_G0032798.1 mouse_genomes_project 7 108398685 108399657 - MGP_BALBcJ_P0085808 Olfr482 protein_coding protein_coding MGP_BALBcJ_T0010818.1 MGP_BALBcJ_G0008943.1 mouse_genomes_project 7 4381173 4381229 + Mir5620 miRNA miRNA MGP_BALBcJ_T0087746.1 MGP_BALBcJ_G0033238.1 mouse_genomes_project 7 143134257 143145824 - MGP_BALBcJ_P0087746 Ctsd protein_coding protein_coding MGP_BALBcJ_T0087747.1 MGP_BALBcJ_G0033238.1 mouse_genomes_project 7 143139051 143151189 - MGP_BALBcJ_P0087747 Ctsd protein_coding protein_coding MGP_BALBcJ_T0087748.1 MGP_BALBcJ_G0033238.1 mouse_genomes_project 7 143139070 143150970 - MGP_BALBcJ_P0087748 Ctsd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087749.1 MGP_BALBcJ_G0033238.1 mouse_genomes_project 7 143146350 143150970 - Ctsd protein_coding retained_intron MGP_BALBcJ_T0084898.1 MGP_BALBcJ_G0032450.1 mouse_genomes_project 7 84377796 84446492 - MGP_BALBcJ_P0084898 Zfand6 protein_coding protein_coding MGP_BALBcJ_T0084899.1 MGP_BALBcJ_G0032450.1 mouse_genomes_project 7 84377796 84446502 - MGP_BALBcJ_P0084899 Zfand6 protein_coding protein_coding MGP_BALBcJ_T0085503.1 MGP_BALBcJ_G0032624.1 mouse_genomes_project 7 103040943 103041882 + MGP_BALBcJ_P0085503 Olfr576 protein_coding protein_coding MGP_BALBcJ_T0085504.1 MGP_BALBcJ_G0032624.1 mouse_genomes_project 7 103040943 103051003 + MGP_BALBcJ_P0085504 Olfr576 protein_coding protein_coding MGP_BALBcJ_T0008837.1 MGP_BALBcJ_G0007136.1 mouse_genomes_project 7 39204604 39215243 + 4933404I11Rik lincRNA lincRNA MGP_BALBcJ_T0009029.1 MGP_BALBcJ_G0007264.1 mouse_genomes_project 7 133492665 133533447 - 1500002F19Rik lincRNA lincRNA MGP_BALBcJ_T0101368.1 MGP_BALBcJ_G0039404.1 mouse_genomes_project 7 144299804 144299931 - Gm23297 snoRNA snoRNA MGP_BALBcJ_T0083735.1 MGP_BALBcJ_G0032177.1 mouse_genomes_project 7 44263963 44294013 - MGP_BALBcJ_P0083735 Ap2a1 protein_coding protein_coding MGP_BALBcJ_T0083736.1 MGP_BALBcJ_G0032177.1 mouse_genomes_project 7 44263963 44294013 - MGP_BALBcJ_P0083736 Ap2a1 protein_coding protein_coding MGP_BALBcJ_T0083737.1 MGP_BALBcJ_G0032177.1 mouse_genomes_project 7 44263964 44293358 - MGP_BALBcJ_P0083737 Ap2a1 protein_coding protein_coding MGP_BALBcJ_T0083738.1 MGP_BALBcJ_G0032177.1 mouse_genomes_project 7 44263964 44293358 - MGP_BALBcJ_P0083738 Ap2a1 protein_coding protein_coding MGP_BALBcJ_T0085776.1 MGP_BALBcJ_G0032773.1 mouse_genomes_project 7 107329480 107331217 - MGP_BALBcJ_P0085776 Olfr2 protein_coding protein_coding MGP_BALBcJ_T0085792.1 MGP_BALBcJ_G0032784.1 mouse_genomes_project 7 107878183 108028660 + MGP_BALBcJ_P0085792 Ppfibp2 protein_coding protein_coding MGP_BALBcJ_T0085793.1 MGP_BALBcJ_G0032784.1 mouse_genomes_project 7 107890184 108032348 + MGP_BALBcJ_P0085793 Ppfibp2 protein_coding protein_coding MGP_BALBcJ_T0082410.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23872366 23903382 - MGP_BALBcJ_P0082410 Axl protein_coding protein_coding MGP_BALBcJ_T0082411.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23872723 23903400 - MGP_BALBcJ_P0082411 Axl protein_coding protein_coding MGP_BALBcJ_T0082412.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23875789 23879176 - Axl protein_coding retained_intron MGP_BALBcJ_T0082413.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23876480 23879525 - Axl protein_coding retained_intron MGP_BALBcJ_T0082414.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23878905 23903395 - Axl protein_coding retained_intron MGP_BALBcJ_T0082415.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23881630 23889786 - MGP_BALBcJ_P0082415 Axl protein_coding protein_coding MGP_BALBcJ_T0082416.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23893604 23901732 - Axl protein_coding retained_intron MGP_BALBcJ_T0082417.1 MGP_BALBcJ_G0031863.1 mouse_genomes_project 7 23900599 23902238 - Axl protein_coding retained_intron MGP_BALBcJ_T0010884.1 MGP_BALBcJ_G0009009.1 mouse_genomes_project 7 79660689 79660785 + Gm24541 miRNA miRNA MGP_BALBcJ_T0083621.1 MGP_BALBcJ_G0032155.1 mouse_genomes_project 7 43842349 43848942 - MGP_BALBcJ_P0083621 Emc10 protein_coding protein_coding MGP_BALBcJ_T0083622.1 MGP_BALBcJ_G0032155.1 mouse_genomes_project 7 43842523 43848819 - MGP_BALBcJ_P0083622 Emc10 protein_coding protein_coding MGP_BALBcJ_T0083623.1 MGP_BALBcJ_G0032155.1 mouse_genomes_project 7 43843297 43844431 - Emc10 protein_coding retained_intron MGP_BALBcJ_T0083624.1 MGP_BALBcJ_G0032155.1 mouse_genomes_project 7 43844147 43848876 - Emc10 protein_coding retained_intron MGP_BALBcJ_T0083625.1 MGP_BALBcJ_G0032155.1 mouse_genomes_project 7 43844415 43848841 - MGP_BALBcJ_P0083625 Emc10 protein_coding protein_coding MGP_BALBcJ_T0083626.1 MGP_BALBcJ_G0032155.1 mouse_genomes_project 7 43846686 43848810 - Emc10 protein_coding retained_intron MGP_BALBcJ_T0085684.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105729760 105759922 - MGP_BALBcJ_P0085684 Trim3 protein_coding protein_coding MGP_BALBcJ_T0085685.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105735794 105759974 - MGP_BALBcJ_P0085685 Trim3 protein_coding protein_coding MGP_BALBcJ_T0085686.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105735972 105759951 - MGP_BALBcJ_P0085686 Trim3 protein_coding protein_coding MGP_BALBcJ_T0085687.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105736463 105737181 - Trim3 protein_coding retained_intron MGP_BALBcJ_T0085688.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105737632 105738730 - Trim3 protein_coding retained_intron MGP_BALBcJ_T0085689.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105742355 105743351 - Trim3 protein_coding retained_intron MGP_BALBcJ_T0085690.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105744108 105759939 - MGP_BALBcJ_P0085690 Trim3 protein_coding protein_coding MGP_BALBcJ_T0085691.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105744430 105759985 - Trim3 protein_coding processed_transcript MGP_BALBcJ_T0085692.1 MGP_BALBcJ_G0032743.1 mouse_genomes_project 7 105744707 105759899 - MGP_BALBcJ_P0085692 Trim3 protein_coding protein_coding MGP_BALBcJ_T0081681.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10617382 10651442 + Lig1 protein_coding processed_transcript MGP_BALBcJ_T0081682.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10617412 10651442 + MGP_BALBcJ_P0081682 Lig1 protein_coding protein_coding MGP_BALBcJ_T0081683.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10618924 10651442 + MGP_BALBcJ_P0081683 Lig1 protein_coding protein_coding MGP_BALBcJ_T0081684.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10618933 10631612 + MGP_BALBcJ_P0081684 Lig1 protein_coding protein_coding MGP_BALBcJ_T0081685.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10618953 10632591 + MGP_BALBcJ_P0081685 Lig1 protein_coding protein_coding MGP_BALBcJ_T0081686.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10618963 10651443 + Lig1 protein_coding processed_transcript MGP_BALBcJ_T0081687.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10619363 10651450 + Lig1 protein_coding processed_transcript MGP_BALBcJ_T0081688.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10619363 10651442 + MGP_BALBcJ_P0081688 Lig1 protein_coding protein_coding MGP_BALBcJ_T0081689.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10620238 10651450 + Lig1 protein_coding processed_transcript MGP_BALBcJ_T0081690.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10620238 10631339 + MGP_BALBcJ_P0081690 Lig1 protein_coding protein_coding MGP_BALBcJ_T0081691.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10642900 10646086 + Lig1 protein_coding retained_intron MGP_BALBcJ_T0081692.1 MGP_BALBcJ_G0031650.1 mouse_genomes_project 7 10647260 10651382 + Lig1 protein_coding retained_intron MGP_BALBcJ_T0102792.1 MGP_BALBcJ_G0040607.1 mouse_genomes_project 7 85570451 85571068 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0086955.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128401199 128407303 + MGP_BALBcJ_P0086955 Bckdk protein_coding protein_coding MGP_BALBcJ_T0086956.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128401220 128403075 + Bckdk protein_coding retained_intron MGP_BALBcJ_T0086957.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128401757 128403284 + MGP_BALBcJ_P0086957 Bckdk protein_coding protein_coding MGP_BALBcJ_T0086958.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128401879 128405721 + MGP_BALBcJ_P0086958 Bckdk protein_coding protein_coding MGP_BALBcJ_T0086959.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128401879 128405721 + MGP_BALBcJ_P0086959 Bckdk protein_coding protein_coding MGP_BALBcJ_T0086960.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128402034 128403496 + MGP_BALBcJ_P0086960 Bckdk protein_coding protein_coding MGP_BALBcJ_T0086961.1 MGP_BALBcJ_G0033047.1 mouse_genomes_project 7 128404352 128405713 + MGP_BALBcJ_P0086961 Bckdk protein_coding protein_coding MGP_BALBcJ_T0015855.1 MGP_BALBcJ_G0013952.1 mouse_genomes_project 7 101223592 101224530 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083887.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44939340 44952968 + MGP_BALBcJ_P0083887 Hsd17b14 protein_coding protein_coding MGP_BALBcJ_T0083888.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44939384 44953399 + MGP_BALBcJ_P0083888 Hsd17b14 protein_coding protein_coding MGP_BALBcJ_T0083889.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44940491 44952965 + Hsd17b14 protein_coding retained_intron MGP_BALBcJ_T0083890.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44943439 44951656 + Hsd17b14 protein_coding retained_intron MGP_BALBcJ_T0083891.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44947311 44951831 + Hsd17b14 protein_coding processed_transcript MGP_BALBcJ_T0083892.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44947322 44952334 + Hsd17b14 protein_coding processed_transcript MGP_BALBcJ_T0083893.1 MGP_BALBcJ_G0032221.1 mouse_genomes_project 7 44948273 44951848 + Hsd17b14 protein_coding processed_transcript MGP_BALBcJ_T0008893.1 MGP_BALBcJ_G0007180.1 mouse_genomes_project 7 72810613 72810993 - Gm28746 lincRNA lincRNA MGP_BALBcJ_T0082221.1 MGP_BALBcJ_G0031821.1 mouse_genomes_project 7 22605714 22627451 + MGP_BALBcJ_P0082221 Ethe1 protein_coding protein_coding MGP_BALBcJ_T0081552.1 MGP_BALBcJ_G0031591.1 mouse_genomes_project 7 3586821 3588139 - MGP_BALBcJ_P0081552 protein_coding protein_coding MGP_BALBcJ_T0087079.1 MGP_BALBcJ_G0033069.1 mouse_genomes_project 7 129215420 129261289 - MGP_BALBcJ_P0087079 Mcmbp protein_coding protein_coding MGP_BALBcJ_T0087080.1 MGP_BALBcJ_G0033069.1 mouse_genomes_project 7 129216745 129261280 - MGP_BALBcJ_P0087080 Mcmbp protein_coding protein_coding MGP_BALBcJ_T0087081.1 MGP_BALBcJ_G0033069.1 mouse_genomes_project 7 129217165 129218198 - Mcmbp protein_coding processed_transcript MGP_BALBcJ_T0087082.1 MGP_BALBcJ_G0033069.1 mouse_genomes_project 7 129218301 129221748 - Mcmbp protein_coding retained_intron MGP_BALBcJ_T0087083.1 MGP_BALBcJ_G0033069.1 mouse_genomes_project 7 129231912 129234154 - Mcmbp protein_coding retained_intron MGP_BALBcJ_T0084089.1 MGP_BALBcJ_G0032282.1 mouse_genomes_project 7 48045299 48060955 - MGP_BALBcJ_P0084089 Mrgprx2 protein_coding protein_coding MGP_BALBcJ_T0084090.1 MGP_BALBcJ_G0032282.1 mouse_genomes_project 7 48047306 48057759 - MGP_BALBcJ_P0084090 Mrgprx2 protein_coding protein_coding MGP_BALBcJ_T0010887.1 MGP_BALBcJ_G0009012.1 mouse_genomes_project 7 96153222 96153331 + Mir708 miRNA miRNA MGP_BALBcJ_T0101965.1 MGP_BALBcJ_G0039821.1 mouse_genomes_project 7 14234671 14243363 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101966.1 MGP_BALBcJ_G0039821.1 mouse_genomes_project 7 14235054 14237503 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0087386.1 MGP_BALBcJ_G0033138.1 mouse_genomes_project 7 140639237 140640561 + MGP_BALBcJ_P0087386 Utf1 protein_coding protein_coding MGP_BALBcJ_T0085059.1 MGP_BALBcJ_G0032509.1 mouse_genomes_project 7 97315717 97320491 - MGP_BALBcJ_P0085059 Thrsp protein_coding protein_coding MGP_BALBcJ_T0085060.1 MGP_BALBcJ_G0032509.1 mouse_genomes_project 7 97318911 97320280 - Thrsp protein_coding retained_intron MGP_BALBcJ_T0102685.1 MGP_BALBcJ_G0040500.1 mouse_genomes_project 7 9309234 9310074 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015726.1 MGP_BALBcJ_G0013823.1 mouse_genomes_project 7 23505003 23506315 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008870.1 MGP_BALBcJ_G0007162.1 mouse_genomes_project 7 66781893 66800228 - 1700112J16Rik lincRNA lincRNA MGP_BALBcJ_T0086548.1 MGP_BALBcJ_G0032975.1 mouse_genomes_project 7 127063091 127067262 + MGP_BALBcJ_P0086548 Apobr protein_coding protein_coding MGP_BALBcJ_T0086549.1 MGP_BALBcJ_G0032975.1 mouse_genomes_project 7 127063140 127066101 + MGP_BALBcJ_P0086549 Apobr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086550.1 MGP_BALBcJ_G0032975.1 mouse_genomes_project 7 127063141 127066520 + MGP_BALBcJ_P0086550 Apobr protein_coding protein_coding MGP_BALBcJ_T0086551.1 MGP_BALBcJ_G0032975.1 mouse_genomes_project 7 127065229 127066595 + MGP_BALBcJ_P0086551 Apobr protein_coding protein_coding MGP_BALBcJ_T0086552.1 MGP_BALBcJ_G0032975.1 mouse_genomes_project 7 127065823 127066475 + MGP_BALBcJ_P0086552 Apobr protein_coding protein_coding MGP_BALBcJ_T0086891.1 MGP_BALBcJ_G0033033.1 mouse_genomes_project 7 128208551 128214022 + MGP_BALBcJ_P0086891 Ctf1 protein_coding protein_coding MGP_BALBcJ_T0086892.1 MGP_BALBcJ_G0033033.1 mouse_genomes_project 7 128208752 128213160 + MGP_BALBcJ_P0086892 Ctf1 protein_coding protein_coding MGP_BALBcJ_T0086893.1 MGP_BALBcJ_G0033033.1 mouse_genomes_project 7 128208759 128213420 + MGP_BALBcJ_P0086893 Ctf1 protein_coding protein_coding MGP_BALBcJ_T0086894.1 MGP_BALBcJ_G0033033.1 mouse_genomes_project 7 128209115 128212856 + Ctf1 protein_coding processed_transcript MGP_BALBcJ_T0086895.1 MGP_BALBcJ_G0033033.1 mouse_genomes_project 7 128209372 128212869 + Ctf1 protein_coding processed_transcript MGP_BALBcJ_T0082199.1 MGP_BALBcJ_G0031815.1 mouse_genomes_project 7 22498512 22522583 + MGP_BALBcJ_P0082199 Cadm4 protein_coding protein_coding MGP_BALBcJ_T0082200.1 MGP_BALBcJ_G0031815.1 mouse_genomes_project 7 22518005 22520839 + Cadm4 protein_coding processed_transcript MGP_BALBcJ_T0100100.1 MGP_BALBcJ_G0038136.1 mouse_genomes_project 7 127045415 127045521 - Gm25579 snRNA snRNA MGP_BALBcJ_T0008808.1 MGP_BALBcJ_G0007113.1 mouse_genomes_project 7 32948907 32956587 + Gm26762 lincRNA lincRNA MGP_BALBcJ_T0015910.1 MGP_BALBcJ_G0014007.1 mouse_genomes_project 7 143057859 143058312 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082465.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25404814 25415982 - MGP_BALBcJ_P0082465 Rab4b protein_coding protein_coding MGP_BALBcJ_T0082466.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25404816 25415896 - MGP_BALBcJ_P0082466 Rab4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082467.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25404817 25415901 - Rab4b protein_coding retained_intron MGP_BALBcJ_T0082469.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25405085 25415974 - Rab4b protein_coding processed_transcript MGP_BALBcJ_T0082470.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25408768 25410882 - Rab4b protein_coding retained_intron MGP_BALBcJ_T0082471.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25409079 25410829 - Rab4b protein_coding processed_transcript MGP_BALBcJ_T0082472.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25412166 25415962 - Rab4b protein_coding processed_transcript MGP_BALBcJ_T0082473.1 MGP_BALBcJ_G0031882.1 mouse_genomes_project 7 25412197 25415909 - Rab4b protein_coding processed_transcript MGP_BALBcJ_T0087368.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140292676 140377742 - MGP_BALBcJ_P0087368 protein_coding protein_coding MGP_BALBcJ_T0087369.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140292676 140308252 - MGP_BALBcJ_P0087369 protein_coding protein_coding MGP_BALBcJ_T0087370.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140292676 140298169 - MGP_BALBcJ_P0087370 protein_coding protein_coding MGP_BALBcJ_T0087371.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140292805 140308232 - protein_coding retained_intron MGP_BALBcJ_T0087372.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140303896 140308252 - protein_coding retained_intron MGP_BALBcJ_T0087373.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140331597 140353866 - MGP_BALBcJ_P0087373 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087374.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140331597 140377742 - MGP_BALBcJ_P0087374 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087375.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140338546 140377742 - protein_coding retained_intron MGP_BALBcJ_T0087376.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140369483 140377742 - MGP_BALBcJ_P0087376 protein_coding protein_coding MGP_BALBcJ_T0087377.1 MGP_BALBcJ_G0033135.1 mouse_genomes_project 7 140372193 140377742 - protein_coding retained_intron MGP_BALBcJ_T0081799.1 MGP_BALBcJ_G0031689.1 mouse_genomes_project 7 14032965 14035676 + MGP_BALBcJ_P0081799 Tmem160 protein_coding protein_coding MGP_BALBcJ_T0010836.1 MGP_BALBcJ_G0008961.1 mouse_genomes_project 7 28139705 28139788 + Mir1964 miRNA miRNA MGP_BALBcJ_T0010898.1 MGP_BALBcJ_G0009023.1 mouse_genomes_project 7 118227879 118227984 + Gm24063 miRNA miRNA MGP_BALBcJ_T0101332.1 MGP_BALBcJ_G0039368.1 mouse_genomes_project 7 59297236 59297306 - Snord107 snoRNA snoRNA MGP_BALBcJ_T0015712.1 MGP_BALBcJ_G0013809.1 mouse_genomes_project 7 15411906 15412373 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008792.1 MGP_BALBcJ_G0007099.1 mouse_genomes_project 7 22464004 22466967 + Gm44512 lincRNA lincRNA MGP_BALBcJ_T0005150.1 MGP_BALBcJ_G0004387.1 mouse_genomes_project 7 25354807 25360818 - Gm15883 antisense antisense MGP_BALBcJ_T0081421.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1715669 1723622 + MGP_BALBcJ_P0081421 Suv420h2 protein_coding protein_coding MGP_BALBcJ_T0081422.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1715707 1717644 + Suv420h2 protein_coding retained_intron MGP_BALBcJ_T0081423.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1715710 1718609 + MGP_BALBcJ_P0081423 Suv420h2 protein_coding protein_coding MGP_BALBcJ_T0081424.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1715721 1723622 + MGP_BALBcJ_P0081424 Suv420h2 protein_coding protein_coding MGP_BALBcJ_T0081425.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1715739 1723622 + MGP_BALBcJ_P0081425 Suv420h2 protein_coding protein_coding MGP_BALBcJ_T0081426.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1717190 1718093 + Suv420h2 protein_coding retained_intron MGP_BALBcJ_T0081427.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1717405 1723006 + MGP_BALBcJ_P0081427 Suv420h2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081428.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1717879 1722016 + Suv420h2 protein_coding retained_intron MGP_BALBcJ_T0081429.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1718009 1719054 + Suv420h2 protein_coding retained_intron MGP_BALBcJ_T0081430.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1718212 1719178 + Suv420h2 protein_coding retained_intron MGP_BALBcJ_T0081431.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1718299 1722229 + Suv420h2 protein_coding retained_intron MGP_BALBcJ_T0081432.1 MGP_BALBcJ_G0031539.1 mouse_genomes_project 7 1721915 1722704 + MGP_BALBcJ_P0081432 Suv420h2 protein_coding protein_coding MGP_BALBcJ_T0081902.1 MGP_BALBcJ_G0031724.1 mouse_genomes_project 7 16602577 16623779 - MGP_BALBcJ_P0081902 Psg17 protein_coding protein_coding MGP_BALBcJ_T0008913.1 MGP_BALBcJ_G0007195.1 mouse_genomes_project 7 78542889 78543166 + 1700011D18Rik lincRNA lincRNA MGP_BALBcJ_T0010868.1 MGP_BALBcJ_G0008993.1 mouse_genomes_project 7 61302699 61302762 - Mir344b miRNA miRNA MGP_BALBcJ_T0085511.1 MGP_BALBcJ_G0032631.1 mouse_genomes_project 7 103232747 103233701 - MGP_BALBcJ_P0085511 Olfr586 protein_coding protein_coding MGP_BALBcJ_T0086136.1 MGP_BALBcJ_G0032887.1 mouse_genomes_project 7 118968366 118992065 - MGP_BALBcJ_P0086136 Coq7 protein_coding protein_coding MGP_BALBcJ_T0086137.1 MGP_BALBcJ_G0032887.1 mouse_genomes_project 7 118983825 118992120 - MGP_BALBcJ_P0086137 Coq7 protein_coding protein_coding MGP_BALBcJ_T0086138.1 MGP_BALBcJ_G0032887.1 mouse_genomes_project 7 118985567 118992078 - Coq7 protein_coding retained_intron MGP_BALBcJ_T0087193.1 MGP_BALBcJ_G0033092.1 mouse_genomes_project 7 132565720 132588938 + MGP_BALBcJ_P0087193 Gpr26 protein_coding protein_coding MGP_BALBcJ_T0011668.1 MGP_BALBcJ_G0009793.1 mouse_genomes_project 7 74941123 74941446 + Gm24858 misc_RNA misc_RNA MGP_BALBcJ_T0010886.1 MGP_BALBcJ_G0009011.1 mouse_genomes_project 7 86128068 86128164 - Gm23192 miRNA miRNA MGP_BALBcJ_T0081881.1 MGP_BALBcJ_G0031712.1 mouse_genomes_project 7 15542621 15545646 + MGP_BALBcJ_P0081881 Ceacam14 protein_coding protein_coding MGP_BALBcJ_T0087710.1 MGP_BALBcJ_G0033225.1 mouse_genomes_project 7 142587071 142615507 - MGP_BALBcJ_P0087710 Tollip protein_coding protein_coding MGP_BALBcJ_T0087711.1 MGP_BALBcJ_G0033225.1 mouse_genomes_project 7 142594672 142615400 - MGP_BALBcJ_P0087711 Tollip protein_coding protein_coding MGP_BALBcJ_T0087712.1 MGP_BALBcJ_G0033225.1 mouse_genomes_project 7 142605084 142615515 - MGP_BALBcJ_P0087712 Tollip protein_coding protein_coding MGP_BALBcJ_T0087398.1 MGP_BALBcJ_G0033141.1 mouse_genomes_project 7 140692902 140717177 - MGP_BALBcJ_P0087398 Tubgcp2 protein_coding protein_coding MGP_BALBcJ_T0082406.1 MGP_BALBcJ_G0031862.1 mouse_genomes_project 7 23836051 23869729 - MGP_BALBcJ_P0082406 Hnrnpul1 protein_coding protein_coding MGP_BALBcJ_T0082407.1 MGP_BALBcJ_G0031862.1 mouse_genomes_project 7 23851706 23869795 - MGP_BALBcJ_P0082407 Hnrnpul1 protein_coding protein_coding MGP_BALBcJ_T0082408.1 MGP_BALBcJ_G0031862.1 mouse_genomes_project 7 23854388 23856682 - Hnrnpul1 protein_coding retained_intron MGP_BALBcJ_T0082409.1 MGP_BALBcJ_G0031862.1 mouse_genomes_project 7 23856857 23859472 - Hnrnpul1 protein_coding retained_intron MGP_BALBcJ_T0086426.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126109761 126176963 - MGP_BALBcJ_P0086426 Gtf3c1 protein_coding protein_coding MGP_BALBcJ_T0086427.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126109761 126177066 - MGP_BALBcJ_P0086427 Gtf3c1 protein_coding protein_coding MGP_BALBcJ_T0086428.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126113054 126118787 - Gtf3c1 protein_coding retained_intron MGP_BALBcJ_T0086429.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126116337 126124730 - MGP_BALBcJ_P0086429 Gtf3c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086430.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126130774 126177046 - Gtf3c1 protein_coding retained_intron MGP_BALBcJ_T0086431.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126131086 126177028 - MGP_BALBcJ_P0086431 Gtf3c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086432.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126131206 126138076 - MGP_BALBcJ_P0086432 Gtf3c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086433.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126136724 126138843 - Gtf3c1 protein_coding retained_intron MGP_BALBcJ_T0086434.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126160516 126168811 - Gtf3c1 protein_coding retained_intron MGP_BALBcJ_T0086435.1 MGP_BALBcJ_G0032958.1 mouse_genomes_project 7 126162525 126175815 - MGP_BALBcJ_P0086435 Gtf3c1 protein_coding protein_coding MGP_BALBcJ_T0085420.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102108095 102127050 + MGP_BALBcJ_P0085420 Xndc1 protein_coding protein_coding MGP_BALBcJ_T0085421.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102108104 102123591 + Xndc1 protein_coding retained_intron MGP_BALBcJ_T0085422.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102108106 102112589 + Xndc1 protein_coding processed_transcript MGP_BALBcJ_T0085423.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102108178 102121212 + MGP_BALBcJ_P0085423 Xndc1 protein_coding protein_coding MGP_BALBcJ_T0085426.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102108343 102126369 + MGP_BALBcJ_P0085426 Xndc1 protein_coding protein_coding MGP_BALBcJ_T0085430.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102119300 102122562 + Xndc1 protein_coding retained_intron MGP_BALBcJ_T0085431.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102122079 102127053 + MGP_BALBcJ_P0085431 Xndc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085432.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102124345 102125879 + Xndc1 protein_coding processed_transcript MGP_BALBcJ_T0085433.1 MGP_BALBcJ_G0032585.1 mouse_genomes_project 7 102124348 102125809 + Xndc1 protein_coding retained_intron MGP_BALBcJ_T0087435.1 MGP_BALBcJ_G0033154.1 mouse_genomes_project 7 140903767 140916440 + MGP_BALBcJ_P0087435 Cd163l1 protein_coding protein_coding MGP_BALBcJ_T0084352.1 MGP_BALBcJ_G0032340.1 mouse_genomes_project 7 65683185 65748174 + MGP_BALBcJ_P0084352 Chsy1 protein_coding protein_coding MGP_BALBcJ_T0008940.1 MGP_BALBcJ_G0007206.1 mouse_genomes_project 7 84296275 84340753 + lincRNA lincRNA MGP_BALBcJ_T0084977.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90188330 90249799 + MGP_BALBcJ_P0084977 Sytl2 protein_coding protein_coding MGP_BALBcJ_T0084978.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90188330 90249799 + MGP_BALBcJ_P0084978 Sytl2 protein_coding protein_coding MGP_BALBcJ_T0084979.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90188330 90249799 + MGP_BALBcJ_P0084979 Sytl2 protein_coding protein_coding MGP_BALBcJ_T0084980.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90188330 90249799 + MGP_BALBcJ_P0084980 Sytl2 protein_coding protein_coding MGP_BALBcJ_T0084981.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90188423 90249801 + MGP_BALBcJ_P0084981 Sytl2 protein_coding unknown_likely_coding MGP_BALBcJ_T0084982.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90221050 90249799 + Sytl2 protein_coding processed_transcript MGP_BALBcJ_T0084983.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90221072 90249799 + Sytl2 protein_coding processed_transcript MGP_BALBcJ_T0084984.1 MGP_BALBcJ_G0032490.1 mouse_genomes_project 7 90238044 90249799 + Sytl2 protein_coding processed_transcript MGP_BALBcJ_T0002214.1 MGP_BALBcJ_G0002126.1 mouse_genomes_project 7 39022274 39025577 - TEC TEC MGP_BALBcJ_T0084565.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79150826 79171090 - MGP_BALBcJ_P0084565 Polg protein_coding protein_coding MGP_BALBcJ_T0084566.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79153976 79156230 - MGP_BALBcJ_P0084566 Polg protein_coding protein_coding MGP_BALBcJ_T0084567.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79153977 79159676 - Polg protein_coding retained_intron MGP_BALBcJ_T0084568.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79153977 79170915 - Polg protein_coding retained_intron MGP_BALBcJ_T0084569.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79153977 79155213 - MGP_BALBcJ_P0084569 Polg protein_coding protein_coding MGP_BALBcJ_T0084570.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79154158 79170908 - MGP_BALBcJ_P0084570 Polg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084571.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79154761 79156676 - Polg protein_coding retained_intron MGP_BALBcJ_T0084572.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79156182 79156518 - MGP_BALBcJ_P0084572 Polg protein_coding protein_coding MGP_BALBcJ_T0084573.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79156195 79158382 - MGP_BALBcJ_P0084573 Polg protein_coding protein_coding MGP_BALBcJ_T0084574.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79156525 79158936 - Polg protein_coding retained_intron MGP_BALBcJ_T0084575.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79158541 79160661 - Polg protein_coding retained_intron MGP_BALBcJ_T0084576.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79159126 79159990 - Polg protein_coding retained_intron MGP_BALBcJ_T0084577.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79160081 79164037 - MGP_BALBcJ_P0084577 Polg protein_coding protein_coding MGP_BALBcJ_T0084578.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79160665 79164392 - MGP_BALBcJ_P0084578 Polg protein_coding protein_coding MGP_BALBcJ_T0084579.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79164117 79166400 - Polg protein_coding processed_transcript MGP_BALBcJ_T0084580.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79168643 79170922 - Polg protein_coding retained_intron MGP_BALBcJ_T0084581.1 MGP_BALBcJ_G0032380.1 mouse_genomes_project 7 79169622 79170798 - MGP_BALBcJ_P0084581 Polg protein_coding protein_coding MGP_BALBcJ_T0002291.1 MGP_BALBcJ_G0002202.1 mouse_genomes_project 7 122810331 122815770 + TEC TEC MGP_BALBcJ_T0081446.1 MGP_BALBcJ_G0031543.1 mouse_genomes_project 7 1763538 1764942 + MGP_BALBcJ_P0081446 Tmem190 protein_coding protein_coding MGP_BALBcJ_T0081447.1 MGP_BALBcJ_G0031543.1 mouse_genomes_project 7 1763552 1763958 + Tmem190 protein_coding retained_intron MGP_BALBcJ_T0100089.1 MGP_BALBcJ_G0038125.1 mouse_genomes_project 7 110334153 110334207 + Gm24842 snRNA snRNA MGP_BALBcJ_T0086526.1 MGP_BALBcJ_G0032973.1 mouse_genomes_project 7 127024959 127044959 - MGP_BALBcJ_P0086526 Eif3c protein_coding protein_coding MGP_BALBcJ_T0086527.1 MGP_BALBcJ_G0032973.1 mouse_genomes_project 7 127041197 127044906 - MGP_BALBcJ_P0086527 Eif3c protein_coding protein_coding MGP_BALBcJ_T0086528.1 MGP_BALBcJ_G0032973.1 mouse_genomes_project 7 127041612 127044752 - MGP_BALBcJ_P0086528 Eif3c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083307.1 MGP_BALBcJ_G0032073.1 mouse_genomes_project 7 34083756 34144647 + MGP_BALBcJ_P0083307 Rhpn2 protein_coding protein_coding MGP_BALBcJ_T0083308.1 MGP_BALBcJ_G0032073.1 mouse_genomes_project 7 34083916 34144643 + MGP_BALBcJ_P0083308 Rhpn2 protein_coding protein_coding MGP_BALBcJ_T0083309.1 MGP_BALBcJ_G0032073.1 mouse_genomes_project 7 34131234 34133917 + Rhpn2 protein_coding retained_intron MGP_BALBcJ_T0083310.1 MGP_BALBcJ_G0032073.1 mouse_genomes_project 7 34134826 34137560 + Rhpn2 protein_coding retained_intron MGP_BALBcJ_T0102677.1 MGP_BALBcJ_G0040492.1 mouse_genomes_project 7 7840366 7840740 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015784.1 MGP_BALBcJ_G0013881.1 mouse_genomes_project 7 52363237 52363482 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101326.1 MGP_BALBcJ_G0039362.1 mouse_genomes_project 7 58882991 58895117 - snoRNA snoRNA MGP_BALBcJ_T0015824.1 MGP_BALBcJ_G0013921.1 mouse_genomes_project 7 80894725 80895073 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102820.1 MGP_BALBcJ_G0040635.1 mouse_genomes_project 7 104310495 104311372 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008958.1 MGP_BALBcJ_G0007221.1 mouse_genomes_project 7 100403416 100431491 - Gm10603 lincRNA lincRNA MGP_BALBcJ_T0008959.1 MGP_BALBcJ_G0007221.1 mouse_genomes_project 7 100416085 100423846 - Gm10603 lincRNA lincRNA MGP_BALBcJ_T0008960.1 MGP_BALBcJ_G0007221.1 mouse_genomes_project 7 100420221 100431496 - Gm10603 lincRNA lincRNA MGP_BALBcJ_T0083854.1 MGP_BALBcJ_G0032215.1 mouse_genomes_project 7 44837688 44842890 - MGP_BALBcJ_P0083854 Bax protein_coding protein_coding MGP_BALBcJ_T0085323.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101305113 101336852 + MGP_BALBcJ_P0085323 Stard10 protein_coding protein_coding MGP_BALBcJ_T0085324.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101309163 101336363 + MGP_BALBcJ_P0085324 Stard10 protein_coding protein_coding MGP_BALBcJ_T0085325.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101309439 101333513 + MGP_BALBcJ_P0085325 Stard10 protein_coding protein_coding MGP_BALBcJ_T0085326.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101309664 101336415 + MGP_BALBcJ_P0085326 Stard10 protein_coding protein_coding MGP_BALBcJ_T0085327.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101309736 101336534 + MGP_BALBcJ_P0085327 Stard10 protein_coding protein_coding MGP_BALBcJ_T0085328.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101309921 101334558 + MGP_BALBcJ_P0085328 Stard10 protein_coding protein_coding MGP_BALBcJ_T0085329.1 MGP_BALBcJ_G0032568.1 mouse_genomes_project 7 101332735 101336363 + MGP_BALBcJ_P0085329 Stard10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015667.1 MGP_BALBcJ_G0013764.1 mouse_genomes_project 7 962179 962578 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015900.1 MGP_BALBcJ_G0013997.1 mouse_genomes_project 7 129211668 129212118 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018289.1 MGP_BALBcJ_G0015592.1 mouse_genomes_project 7 2052081 2058473 - processed_transcript processed_transcript MGP_BALBcJ_T0018290.1 MGP_BALBcJ_G0015592.1 mouse_genomes_project 7 2052082 2058388 - processed_transcript processed_transcript MGP_BALBcJ_T0008990.1 MGP_BALBcJ_G0007240.1 mouse_genomes_project 7 125756973 125804814 - 4933440M02Rik lincRNA lincRNA MGP_BALBcJ_T0008991.1 MGP_BALBcJ_G0007240.1 mouse_genomes_project 7 125796184 125816204 - 4933440M02Rik lincRNA lincRNA MGP_BALBcJ_T0008992.1 MGP_BALBcJ_G0007240.1 mouse_genomes_project 7 125798323 125816220 - 4933440M02Rik lincRNA lincRNA MGP_BALBcJ_T0087448.1 MGP_BALBcJ_G0033165.1 mouse_genomes_project 7 141226200 141227132 + MGP_BALBcJ_P0087448 protein_coding protein_coding MGP_BALBcJ_T0081740.1 MGP_BALBcJ_G0031675.1 mouse_genomes_project 7 13530189 13558244 - MGP_BALBcJ_P0081740 Gltscr1 protein_coding protein_coding MGP_BALBcJ_T0084317.1 MGP_BALBcJ_G0032334.1 mouse_genomes_project 7 65218484 65256883 + Tarsl2 protein_coding retained_intron MGP_BALBcJ_T0084318.1 MGP_BALBcJ_G0032334.1 mouse_genomes_project 7 65218484 65265192 + MGP_BALBcJ_P0084318 Tarsl2 protein_coding protein_coding MGP_BALBcJ_T0084319.1 MGP_BALBcJ_G0032334.1 mouse_genomes_project 7 65232585 65235296 + Tarsl2 protein_coding retained_intron MGP_BALBcJ_T0084320.1 MGP_BALBcJ_G0032334.1 mouse_genomes_project 7 65251257 65263180 + Tarsl2 protein_coding processed_transcript MGP_BALBcJ_T0005129.1 MGP_BALBcJ_G0004373.1 mouse_genomes_project 7 15806142 15925215 - antisense antisense MGP_BALBcJ_T0005130.1 MGP_BALBcJ_G0004373.1 mouse_genomes_project 7 15809476 15925259 - antisense antisense MGP_BALBcJ_T0084360.1 MGP_BALBcJ_G0032342.1 mouse_genomes_project 7 65951499 65971453 + MGP_BALBcJ_P0084360 Gm10974 protein_coding protein_coding MGP_BALBcJ_T0002207.1 MGP_BALBcJ_G0002119.1 mouse_genomes_project 7 35511666 35513208 + TEC TEC MGP_BALBcJ_T0102789.1 MGP_BALBcJ_G0040604.1 mouse_genomes_project 7 85298125 85299000 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0083211.1 MGP_BALBcJ_G0032050.1 mouse_genomes_project 7 29794936 29797837 - MGP_BALBcJ_P0083211 Scgb2b3 protein_coding protein_coding MGP_BALBcJ_T0081963.1 MGP_BALBcJ_G0031741.1 mouse_genomes_project 7 16953214 16974189 + MGP_BALBcJ_P0081963 Fbxo46 protein_coding protein_coding MGP_BALBcJ_T0081964.1 MGP_BALBcJ_G0031741.1 mouse_genomes_project 7 16965705 16971831 + MGP_BALBcJ_P0081964 Fbxo46 protein_coding protein_coding MGP_BALBcJ_T0011660.1 MGP_BALBcJ_G0009785.1 mouse_genomes_project 7 13505330 13505578 + Gm24576 misc_RNA misc_RNA MGP_BALBcJ_T0084853.1 MGP_BALBcJ_G0032435.1 mouse_genomes_project 7 82403739 82431078 + MGP_BALBcJ_P0084853 Efl1 protein_coding protein_coding MGP_BALBcJ_T0084854.1 MGP_BALBcJ_G0032435.1 mouse_genomes_project 7 82403739 82529134 + MGP_BALBcJ_P0084854 Efl1 protein_coding protein_coding MGP_BALBcJ_T0084855.1 MGP_BALBcJ_G0032435.1 mouse_genomes_project 7 82403754 82455198 + Efl1 protein_coding retained_intron MGP_BALBcJ_T0084856.1 MGP_BALBcJ_G0032435.1 mouse_genomes_project 7 82403766 82529134 + MGP_BALBcJ_P0084856 Efl1 protein_coding protein_coding MGP_BALBcJ_T0084857.1 MGP_BALBcJ_G0032435.1 mouse_genomes_project 7 82426751 82431067 + Efl1 protein_coding processed_transcript MGP_BALBcJ_T0082336.1 MGP_BALBcJ_G0031847.1 mouse_genomes_project 7 23361302 23364024 + MGP_BALBcJ_P0082336 Prr19 protein_coding protein_coding MGP_BALBcJ_T0008982.1 MGP_BALBcJ_G0007233.1 mouse_genomes_project 7 117679080 117728589 + Gm45152 lincRNA lincRNA MGP_BALBcJ_T0018318.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44953441 44961312 - processed_transcript processed_transcript MGP_BALBcJ_T0018319.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44953581 44961312 - processed_transcript processed_transcript MGP_BALBcJ_T0018320.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44953747 44961001 - processed_transcript retained_intron MGP_BALBcJ_T0018321.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44953770 44961482 - processed_transcript processed_transcript MGP_BALBcJ_T0018322.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44953866 44961312 - processed_transcript processed_transcript MGP_BALBcJ_T0018323.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44954745 44961328 - processed_transcript retained_intron MGP_BALBcJ_T0018324.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44956312 44957203 - processed_transcript processed_transcript MGP_BALBcJ_T0018325.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44956339 44961349 - processed_transcript processed_transcript MGP_BALBcJ_T0018326.1 MGP_BALBcJ_G0015607.1 mouse_genomes_project 7 44960239 44961311 - processed_transcript retained_intron MGP_BALBcJ_T0081819.1 MGP_BALBcJ_G0031696.1 mouse_genomes_project 7 14398490 14405979 - MGP_BALBcJ_P0081819 Fkrp protein_coding protein_coding MGP_BALBcJ_T0081820.1 MGP_BALBcJ_G0031696.1 mouse_genomes_project 7 14400856 14404768 - MGP_BALBcJ_P0081820 Fkrp protein_coding protein_coding MGP_BALBcJ_T0081821.1 MGP_BALBcJ_G0031696.1 mouse_genomes_project 7 14402364 14404940 - Fkrp protein_coding retained_intron MGP_BALBcJ_T0081822.1 MGP_BALBcJ_G0031696.1 mouse_genomes_project 7 14403990 14405979 - Fkrp protein_coding retained_intron MGP_BALBcJ_T0082069.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551364 17554422 - MGP_BALBcJ_P0082069 Apoe protein_coding protein_coding MGP_BALBcJ_T0082070.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551522 17554308 - MGP_BALBcJ_P0082070 Apoe protein_coding protein_coding MGP_BALBcJ_T0082071.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551527 17553663 - MGP_BALBcJ_P0082071 Apoe protein_coding protein_coding MGP_BALBcJ_T0082072.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551527 17554264 - MGP_BALBcJ_P0082072 Apoe protein_coding protein_coding MGP_BALBcJ_T0082073.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551527 17554308 - MGP_BALBcJ_P0082073 Apoe protein_coding protein_coding MGP_BALBcJ_T0082074.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551875 17554294 - MGP_BALBcJ_P0082074 Apoe protein_coding protein_coding MGP_BALBcJ_T0082075.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17551876 17553877 - MGP_BALBcJ_P0082075 Apoe protein_coding protein_coding MGP_BALBcJ_T0082076.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17552099 17553503 - MGP_BALBcJ_P0082076 Apoe protein_coding protein_coding MGP_BALBcJ_T0082077.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17552495 17554306 - MGP_BALBcJ_P0082077 Apoe protein_coding protein_coding MGP_BALBcJ_T0082078.1 MGP_BALBcJ_G0031773.1 mouse_genomes_project 7 17552511 17553523 - MGP_BALBcJ_P0082078 Apoe protein_coding protein_coding MGP_BALBcJ_T0086004.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906248 113967045 + MGP_BALBcJ_P0086004 Far1 protein_coding protein_coding MGP_BALBcJ_T0086005.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906275 113945994 + Far1 protein_coding retained_intron MGP_BALBcJ_T0086006.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906275 113943070 + MGP_BALBcJ_P0086006 Far1 protein_coding protein_coding MGP_BALBcJ_T0086007.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906275 113967045 + MGP_BALBcJ_P0086007 Far1 protein_coding protein_coding MGP_BALBcJ_T0086008.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906276 113965992 + MGP_BALBcJ_P0086008 Far1 protein_coding protein_coding MGP_BALBcJ_T0086009.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906291 113945529 + MGP_BALBcJ_P0086009 Far1 protein_coding protein_coding MGP_BALBcJ_T0086010.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906295 113921630 + Far1 protein_coding retained_intron MGP_BALBcJ_T0086011.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113906512 113934879 + MGP_BALBcJ_P0086011 Far1 protein_coding protein_coding MGP_BALBcJ_T0086012.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113942947 113948632 + Far1 protein_coding retained_intron MGP_BALBcJ_T0086013.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113956448 113963684 + Far1 protein_coding retained_intron MGP_BALBcJ_T0086014.1 MGP_BALBcJ_G0032864.1 mouse_genomes_project 7 113961633 113963739 + Far1 protein_coding retained_intron MGP_BALBcJ_T0008942.1 MGP_BALBcJ_G0007208.1 mouse_genomes_project 7 89957588 89962275 - 2310010J17Rik lincRNA lincRNA MGP_BALBcJ_T0098642.1 MGP_BALBcJ_G0036696.1 mouse_genomes_project 7 28011261 28011377 - n-R5s153 rRNA rRNA MGP_BALBcJ_T0002302.1 MGP_BALBcJ_G0002213.1 mouse_genomes_project 7 127429642 127431392 + TEC TEC MGP_BALBcJ_T0081395.1 MGP_BALBcJ_G0031533.1 mouse_genomes_project 7 1534159 1578370 - MGP_BALBcJ_P0081395 Ptprh protein_coding protein_coding MGP_BALBcJ_T0081396.1 MGP_BALBcJ_G0031533.1 mouse_genomes_project 7 1534500 1579270 - MGP_BALBcJ_P0081396 Ptprh protein_coding protein_coding MGP_BALBcJ_T0081397.1 MGP_BALBcJ_G0031533.1 mouse_genomes_project 7 1538756 1548218 - Ptprh protein_coding retained_intron MGP_BALBcJ_T0082282.1 MGP_BALBcJ_G0031837.1 mouse_genomes_project 7 23020563 23047972 - MGP_BALBcJ_P0082282 Atp1a3 protein_coding protein_coding MGP_BALBcJ_T0082283.1 MGP_BALBcJ_G0031837.1 mouse_genomes_project 7 23020563 23048035 - MGP_BALBcJ_P0082283 Atp1a3 protein_coding protein_coding MGP_BALBcJ_T0082284.1 MGP_BALBcJ_G0031837.1 mouse_genomes_project 7 23020566 23048020 - MGP_BALBcJ_P0082284 Atp1a3 protein_coding protein_coding MGP_BALBcJ_T0082285.1 MGP_BALBcJ_G0031837.1 mouse_genomes_project 7 23034401 23047984 - Atp1a3 protein_coding retained_intron MGP_BALBcJ_T0082286.1 MGP_BALBcJ_G0031837.1 mouse_genomes_project 7 23042650 23048034 - Atp1a3 protein_coding retained_intron MGP_BALBcJ_T0082487.1 MGP_BALBcJ_G0031887.1 mouse_genomes_project 7 25444372 25465781 - MGP_BALBcJ_P0082487 Itpkc protein_coding protein_coding MGP_BALBcJ_T0082488.1 MGP_BALBcJ_G0031887.1 mouse_genomes_project 7 25445170 25450254 - Itpkc protein_coding processed_transcript MGP_BALBcJ_T0082489.1 MGP_BALBcJ_G0031887.1 mouse_genomes_project 7 25449766 25451656 - Itpkc protein_coding retained_intron MGP_BALBcJ_T0082490.1 MGP_BALBcJ_G0031887.1 mouse_genomes_project 7 25462896 25465814 - Itpkc protein_coding retained_intron MGP_BALBcJ_T0085172.1 MGP_BALBcJ_G0032532.1 mouse_genomes_project 7 99202141 99268893 + MGP_BALBcJ_P0085172 Map6 protein_coding protein_coding MGP_BALBcJ_T0085173.1 MGP_BALBcJ_G0032532.1 mouse_genomes_project 7 99202141 99268893 + MGP_BALBcJ_P0085173 Map6 protein_coding protein_coding MGP_BALBcJ_T0085174.1 MGP_BALBcJ_G0032532.1 mouse_genomes_project 7 99202183 99251732 + Map6 protein_coding retained_intron MGP_BALBcJ_T0085175.1 MGP_BALBcJ_G0032532.1 mouse_genomes_project 7 99203040 99268894 + MGP_BALBcJ_P0085175 Map6 protein_coding protein_coding MGP_BALBcJ_T0085176.1 MGP_BALBcJ_G0032532.1 mouse_genomes_project 7 99252579 99253835 + Map6 protein_coding processed_transcript MGP_BALBcJ_T0008815.1 MGP_BALBcJ_G0007119.1 mouse_genomes_project 7 33799970 33809466 - Gm45096 lincRNA lincRNA MGP_BALBcJ_T0081473.1 MGP_BALBcJ_G0031554.1 mouse_genomes_project 7 1959946 1965814 - MGP_BALBcJ_P0081473 Sbk3 protein_coding protein_coding MGP_BALBcJ_T0081474.1 MGP_BALBcJ_G0031554.1 mouse_genomes_project 7 1962213 1966021 - MGP_BALBcJ_P0081474 Sbk3 protein_coding protein_coding MGP_BALBcJ_T0081670.1 MGP_BALBcJ_G0031645.1 mouse_genomes_project 7 10462184 10463135 - MGP_BALBcJ_P0081670 Vmn1r86 protein_coding protein_coding MGP_BALBcJ_T0008922.1 MGP_BALBcJ_G0007198.1 mouse_genomes_project 7 79240881 79265396 + Gm35040 lincRNA lincRNA MGP_BALBcJ_T0085966.1 MGP_BALBcJ_G0032855.1 mouse_genomes_project 7 112473041 112517980 - MGP_BALBcJ_P0085966 Dkk3 protein_coding protein_coding MGP_BALBcJ_T0083520.1 MGP_BALBcJ_G0032127.1 mouse_genomes_project 7 42935564 42940935 + MGP_BALBcJ_P0083520 Klk14 protein_coding protein_coding MGP_BALBcJ_T0085744.1 MGP_BALBcJ_G0032750.1 mouse_genomes_project 7 105873307 105880619 - MGP_BALBcJ_P0085744 Tpp1 protein_coding protein_coding MGP_BALBcJ_T0083438.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40721562 40743312 + MGP_BALBcJ_P0083438 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0083439.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40721890 40746642 + MGP_BALBcJ_P0083439 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0083440.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40721915 40744122 + MGP_BALBcJ_P0083440 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0083441.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40721917 40744761 + MGP_BALBcJ_P0083441 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0083442.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40721923 40746695 + MGP_BALBcJ_P0083442 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0083443.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40721936 40747464 + MGP_BALBcJ_P0083443 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0083444.1 MGP_BALBcJ_G0032100.1 mouse_genomes_project 7 40743347 40746360 + MGP_BALBcJ_P0083444 Zfp788 protein_coding protein_coding MGP_BALBcJ_T0102757.1 MGP_BALBcJ_G0040572.1 mouse_genomes_project 7 46995206 46996043 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102733.1 MGP_BALBcJ_G0040548.1 mouse_genomes_project 7 32545149 32546127 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0086024.1 MGP_BALBcJ_G0032870.1 mouse_genomes_project 7 114826772 114951072 + MGP_BALBcJ_P0086024 Pde3b protein_coding protein_coding MGP_BALBcJ_T0086025.1 MGP_BALBcJ_G0032870.1 mouse_genomes_project 7 114917995 114920285 + Pde3b protein_coding retained_intron MGP_BALBcJ_T0086026.1 MGP_BALBcJ_G0032870.1 mouse_genomes_project 7 114933574 114942838 + Pde3b protein_coding retained_intron MGP_BALBcJ_T0002280.1 MGP_BALBcJ_G0002191.1 mouse_genomes_project 7 81278170 81280379 - TEC TEC MGP_BALBcJ_T0087732.1 MGP_BALBcJ_G0033229.1 mouse_genomes_project 7 142905159 142906474 - MGP_BALBcJ_P0087732 protein_coding protein_coding MGP_BALBcJ_T0101757.1 MGP_BALBcJ_G0039714.1 mouse_genomes_project 7 26777669 26782835 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101758.1 MGP_BALBcJ_G0039714.1 mouse_genomes_project 7 26782062 26782617 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0085011.1 MGP_BALBcJ_G0032497.1 mouse_genomes_project 7 92436736 92492663 - MGP_BALBcJ_P0085011 Ankrd42 protein_coding protein_coding MGP_BALBcJ_T0085012.1 MGP_BALBcJ_G0032497.1 mouse_genomes_project 7 92439667 92492703 - MGP_BALBcJ_P0085012 Ankrd42 protein_coding protein_coding MGP_BALBcJ_T0085013.1 MGP_BALBcJ_G0032497.1 mouse_genomes_project 7 92439683 92492697 - MGP_BALBcJ_P0085013 Ankrd42 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085014.1 MGP_BALBcJ_G0032497.1 mouse_genomes_project 7 92461413 92466598 - Ankrd42 protein_coding retained_intron MGP_BALBcJ_T0085015.1 MGP_BALBcJ_G0032497.1 mouse_genomes_project 7 92465404 92492596 - Ankrd42 protein_coding retained_intron MGP_BALBcJ_T0085016.1 MGP_BALBcJ_G0032497.1 mouse_genomes_project 7 92465656 92492691 - Ankrd42 protein_coding processed_transcript MGP_BALBcJ_T0101360.1 MGP_BALBcJ_G0039396.1 mouse_genomes_project 7 121513425 121513562 - Gm27991 snoRNA snoRNA MGP_BALBcJ_T0083850.1 MGP_BALBcJ_G0032214.1 mouse_genomes_project 7 44833701 44835914 - MGP_BALBcJ_P0083850 Ftl1-ps1 protein_coding protein_coding MGP_BALBcJ_T0083851.1 MGP_BALBcJ_G0032214.1 mouse_genomes_project 7 44833702 44834558 - Ftl1-ps1 protein_coding processed_transcript MGP_BALBcJ_T0083852.1 MGP_BALBcJ_G0032214.1 mouse_genomes_project 7 44833702 44835180 - Ftl1-ps1 protein_coding processed_transcript MGP_BALBcJ_T0083853.1 MGP_BALBcJ_G0032214.1 mouse_genomes_project 7 44833723 44835222 - Ftl1-ps1 protein_coding retained_intron MGP_BALBcJ_T0101318.1 MGP_BALBcJ_G0039354.1 mouse_genomes_project 7 44497794 44497864 - Snord34 snoRNA snoRNA MGP_BALBcJ_T0085177.1 MGP_BALBcJ_G0032533.1 mouse_genomes_project 7 99277122 99285448 - MGP_BALBcJ_P0085177 Serpinh1 protein_coding unknown_likely_coding MGP_BALBcJ_T0102797.1 MGP_BALBcJ_G0040612.1 mouse_genomes_project 7 85816338 85817942 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010915.1 MGP_BALBcJ_G0009040.1 mouse_genomes_project 7 142363249 142363340 + Mir7063 miRNA miRNA MGP_BALBcJ_T0015756.1 MGP_BALBcJ_G0013853.1 mouse_genomes_project 7 34997037 34998012 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081402.1 MGP_BALBcJ_G0031535.1 mouse_genomes_project 7 1607639 1632726 - MGP_BALBcJ_P0081402 Ppp6r1 protein_coding protein_coding MGP_BALBcJ_T0081403.1 MGP_BALBcJ_G0031535.1 mouse_genomes_project 7 1612032 1616108 - Ppp6r1 protein_coding retained_intron MGP_BALBcJ_T0081404.1 MGP_BALBcJ_G0031535.1 mouse_genomes_project 7 1616502 1632697 - Ppp6r1 protein_coding retained_intron MGP_BALBcJ_T0081405.1 MGP_BALBcJ_G0031535.1 mouse_genomes_project 7 1617240 1619229 - MGP_BALBcJ_P0081405 Ppp6r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081406.1 MGP_BALBcJ_G0031535.1 mouse_genomes_project 7 1618081 1623350 - MGP_BALBcJ_P0081406 Ppp6r1 protein_coding protein_coding MGP_BALBcJ_T0081407.1 MGP_BALBcJ_G0031535.1 mouse_genomes_project 7 1619181 1632688 - MGP_BALBcJ_P0081407 Ppp6r1 protein_coding protein_coding MGP_BALBcJ_T0086180.1 MGP_BALBcJ_G0032895.1 mouse_genomes_project 7 119445301 119468531 - MGP_BALBcJ_P0086180 Gprc5b protein_coding protein_coding MGP_BALBcJ_T0009020.1 MGP_BALBcJ_G0007258.1 mouse_genomes_project 7 130169036 130242599 + Gm44868 lincRNA lincRNA MGP_BALBcJ_T0009021.1 MGP_BALBcJ_G0007258.1 mouse_genomes_project 7 130169124 130172793 + Gm44868 lincRNA lincRNA MGP_BALBcJ_T0085774.1 MGP_BALBcJ_G0032771.1 mouse_genomes_project 7 107285592 107286543 - MGP_BALBcJ_P0085774 Olfr6 protein_coding protein_coding MGP_BALBcJ_T0009043.1 MGP_BALBcJ_G0007271.1 mouse_genomes_project 7 145684257 145687160 - Gm26793 lincRNA lincRNA MGP_BALBcJ_T0002257.1 MGP_BALBcJ_G0002168.1 mouse_genomes_project 7 75227633 75230867 + TEC TEC MGP_BALBcJ_T0086259.1 MGP_BALBcJ_G0032919.1 mouse_genomes_project 7 121119657 121130712 - MGP_BALBcJ_P0086259 Pdzd9 protein_coding protein_coding MGP_BALBcJ_T0086260.1 MGP_BALBcJ_G0032919.1 mouse_genomes_project 7 121119715 121130619 - Pdzd9 protein_coding processed_transcript MGP_BALBcJ_T0010918.1 MGP_BALBcJ_G0009043.1 mouse_genomes_project 7 143421639 143421712 - Mir483 miRNA miRNA MGP_BALBcJ_T0008788.1 MGP_BALBcJ_G0007095.1 mouse_genomes_project 7 17144088 17146599 - Gm26802 lincRNA lincRNA MGP_BALBcJ_T0100082.1 MGP_BALBcJ_G0038118.1 mouse_genomes_project 7 96831725 96831834 - Gm22226 snRNA snRNA MGP_BALBcJ_T0083550.1 MGP_BALBcJ_G0032141.1 mouse_genomes_project 7 43312934 43326581 + MGP_BALBcJ_P0083550 protein_coding protein_coding MGP_BALBcJ_T0015821.1 MGP_BALBcJ_G0013918.1 mouse_genomes_project 7 80148111 80149642 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087538.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141920426 141925282 - MGP_BALBcJ_P0087538 Hras protein_coding protein_coding MGP_BALBcJ_T0087539.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141921255 141925326 - MGP_BALBcJ_P0087539 Hras protein_coding protein_coding MGP_BALBcJ_T0087540.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141922247 141925316 - Hras protein_coding retained_intron MGP_BALBcJ_T0087541.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141922247 141925327 - MGP_BALBcJ_P0087541 Hras protein_coding protein_coding MGP_BALBcJ_T0087542.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141922248 141923826 - Hras protein_coding processed_transcript MGP_BALBcJ_T0087543.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141922251 141923299 - Hras protein_coding processed_transcript MGP_BALBcJ_T0087544.1 MGP_BALBcJ_G0033197.1 mouse_genomes_project 7 141922251 141925204 - MGP_BALBcJ_P0087544 Hras protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085799.1 MGP_BALBcJ_G0032789.1 mouse_genomes_project 7 108211967 108213050 + MGP_BALBcJ_P0085799 Olfr472 protein_coding protein_coding MGP_BALBcJ_T0084649.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 79989500 80011560 + MGP_BALBcJ_P0084649 Vps33b protein_coding protein_coding MGP_BALBcJ_T0084650.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 79989530 80011554 + MGP_BALBcJ_P0084650 Vps33b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084651.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 79989585 80005735 + Vps33b protein_coding retained_intron MGP_BALBcJ_T0084652.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 79989591 80011552 + MGP_BALBcJ_P0084652 Vps33b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084653.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 79994325 80004060 + Vps33b protein_coding processed_transcript MGP_BALBcJ_T0084654.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 80009986 80011739 + MGP_BALBcJ_P0084654 Vps33b protein_coding protein_coding MGP_BALBcJ_T0084655.1 MGP_BALBcJ_G0032399.1 mouse_genomes_project 7 80010034 80010857 + Vps33b protein_coding retained_intron MGP_BALBcJ_T0085872.1 MGP_BALBcJ_G0032834.1 mouse_genomes_project 7 110071537 110075650 - MGP_BALBcJ_P0085872 Ascl3 protein_coding protein_coding MGP_BALBcJ_T0087454.1 MGP_BALBcJ_G0033171.1 mouse_genomes_project 7 141416743 141417846 + MGP_BALBcJ_P0087454 Olfr541 protein_coding protein_coding MGP_BALBcJ_T0084891.1 MGP_BALBcJ_G0032447.1 mouse_genomes_project 7 83869713 83913276 - MGP_BALBcJ_P0084891 Abhd17c protein_coding protein_coding MGP_BALBcJ_T0084892.1 MGP_BALBcJ_G0032447.1 mouse_genomes_project 7 83874603 83909199 - Abhd17c protein_coding processed_transcript MGP_BALBcJ_T0083091.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29263575 29277790 - MGP_BALBcJ_P0083091 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083092.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29264000 29279035 - MGP_BALBcJ_P0083092 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083093.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29264000 29278831 - MGP_BALBcJ_P0083093 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083094.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29264000 29278800 - MGP_BALBcJ_P0083094 Cd22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083095.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29264002 29277253 - MGP_BALBcJ_P0083095 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083096.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29264443 29279100 - MGP_BALBcJ_P0083096 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083097.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29264469 29279045 - MGP_BALBcJ_P0083097 Cd22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083098.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29268630 29271746 - MGP_BALBcJ_P0083098 Cd22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083099.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29274873 29277986 - Cd22 protein_coding processed_transcript MGP_BALBcJ_T0083100.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29276248 29279027 - MGP_BALBcJ_P0083100 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083101.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29276388 29276912 - Cd22 protein_coding retained_intron MGP_BALBcJ_T0083102.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29276428 29279044 - Cd22 protein_coding processed_transcript MGP_BALBcJ_T0083103.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29276467 29279044 - Cd22 protein_coding processed_transcript MGP_BALBcJ_T0083104.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29276543 29279034 - MGP_BALBcJ_P0083104 Cd22 protein_coding protein_coding MGP_BALBcJ_T0083105.1 MGP_BALBcJ_G0032033.1 mouse_genomes_project 7 29277954 29279108 - Cd22 protein_coding processed_transcript MGP_BALBcJ_T0081213.1 MGP_BALBcJ_G0031504.1 mouse_genomes_project 7 486518 492852 - MGP_BALBcJ_P0081213 Oscar protein_coding protein_coding MGP_BALBcJ_T0081214.1 MGP_BALBcJ_G0031504.1 mouse_genomes_project 7 486518 492876 - MGP_BALBcJ_P0081214 Oscar protein_coding protein_coding MGP_BALBcJ_T0081215.1 MGP_BALBcJ_G0031504.1 mouse_genomes_project 7 486518 492876 - MGP_BALBcJ_P0081215 Oscar protein_coding protein_coding MGP_BALBcJ_T0081216.1 MGP_BALBcJ_G0031504.1 mouse_genomes_project 7 487876 492804 - Oscar protein_coding processed_transcript MGP_BALBcJ_T0018329.1 MGP_BALBcJ_G0015609.1 mouse_genomes_project 7 55524412 55537857 + A230056P14Rik processed_transcript processed_transcript MGP_BALBcJ_T0018330.1 MGP_BALBcJ_G0015609.1 mouse_genomes_project 7 55524412 55545660 + A230056P14Rik processed_transcript processed_transcript MGP_BALBcJ_T0085208.1 MGP_BALBcJ_G0032543.1 mouse_genomes_project 7 99782144 99803806 - MGP_BALBcJ_P0085208 Spcs2 protein_coding protein_coding MGP_BALBcJ_T0086105.1 MGP_BALBcJ_G0032880.1 mouse_genomes_project 7 116951171 116986328 + MGP_BALBcJ_P0086105 Nucb2 protein_coding protein_coding MGP_BALBcJ_T0086106.1 MGP_BALBcJ_G0032880.1 mouse_genomes_project 7 116951186 116956211 + Nucb2 protein_coding processed_transcript MGP_BALBcJ_T0086107.1 MGP_BALBcJ_G0032880.1 mouse_genomes_project 7 116951217 116986187 + MGP_BALBcJ_P0086107 Nucb2 protein_coding protein_coding MGP_BALBcJ_T0086108.1 MGP_BALBcJ_G0032880.1 mouse_genomes_project 7 116975369 116982591 + MGP_BALBcJ_P0086108 Nucb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086978.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128472986 128491045 + MGP_BALBcJ_P0086978 Fus protein_coding protein_coding MGP_BALBcJ_T0086979.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128473019 128487565 + MGP_BALBcJ_P0086979 Fus protein_coding protein_coding MGP_BALBcJ_T0086980.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128473020 128479860 + Fus protein_coding retained_intron MGP_BALBcJ_T0086981.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128473020 128477746 + Fus protein_coding processed_transcript MGP_BALBcJ_T0086982.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128473020 128487562 + Fus protein_coding retained_intron MGP_BALBcJ_T0086983.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128473037 128487565 + MGP_BALBcJ_P0086983 Fus protein_coding protein_coding MGP_BALBcJ_T0086984.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128477319 128479860 + Fus protein_coding retained_intron MGP_BALBcJ_T0086985.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128477407 128482804 + Fus protein_coding processed_transcript MGP_BALBcJ_T0086986.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128479675 128483760 + Fus protein_coding retained_intron MGP_BALBcJ_T0086987.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128480507 128482366 + Fus protein_coding retained_intron MGP_BALBcJ_T0086988.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128481161 128487092 + MGP_BALBcJ_P0086988 Fus protein_coding protein_coding MGP_BALBcJ_T0086989.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128481216 128485769 + Fus protein_coding retained_intron MGP_BALBcJ_T0086990.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128482846 128486982 + MGP_BALBcJ_P0086990 Fus protein_coding protein_coding MGP_BALBcJ_T0086991.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128483664 128485719 + Fus protein_coding retained_intron MGP_BALBcJ_T0086992.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128485748 128487362 + Fus protein_coding retained_intron MGP_BALBcJ_T0086993.1 MGP_BALBcJ_G0033051.1 mouse_genomes_project 7 128488612 128491045 + MGP_BALBcJ_P0086993 Fus protein_coding protein_coding MGP_BALBcJ_T0002219.1 MGP_BALBcJ_G0002131.1 mouse_genomes_project 7 43664782 43664939 + TEC TEC MGP_BALBcJ_T0085536.1 MGP_BALBcJ_G0032655.1 mouse_genomes_project 7 103724052 103725009 + MGP_BALBcJ_P0085536 Olfr618 protein_coding protein_coding MGP_BALBcJ_T0087879.1 MGP_BALBcJ_G0033257.1 mouse_genomes_project 7 144269400 144270397 - MGP_BALBcJ_P0087879 Phlda2 protein_coding protein_coding MGP_BALBcJ_T0081569.1 MGP_BALBcJ_G0031600.1 mouse_genomes_project 7 4215725 4224508 - MGP_BALBcJ_P0081569 Zfp773 protein_coding protein_coding MGP_BALBcJ_T0015793.1 MGP_BALBcJ_G0013890.1 mouse_genomes_project 7 56544663 56546063 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002258.1 MGP_BALBcJ_G0002169.1 mouse_genomes_project 7 75372261 75373559 + TEC TEC MGP_BALBcJ_T0083267.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33370635 33389728 - MGP_BALBcJ_P0083267 Kctd15 protein_coding protein_coding MGP_BALBcJ_T0083268.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33370636 33388175 - MGP_BALBcJ_P0083268 Kctd15 protein_coding protein_coding MGP_BALBcJ_T0083269.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33370640 33390731 - MGP_BALBcJ_P0083269 Kctd15 protein_coding protein_coding MGP_BALBcJ_T0083270.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33371803 33380387 - Kctd15 protein_coding processed_transcript MGP_BALBcJ_T0083271.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33381629 33389727 - MGP_BALBcJ_P0083271 Kctd15 protein_coding protein_coding MGP_BALBcJ_T0083272.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33387969 33388364 - Kctd15 protein_coding processed_transcript MGP_BALBcJ_T0083273.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33387969 33388650 - Kctd15 protein_coding processed_transcript MGP_BALBcJ_T0083274.1 MGP_BALBcJ_G0032065.1 mouse_genomes_project 7 33390591 33391955 - Kctd15 protein_coding processed_transcript MGP_BALBcJ_T0082388.1 MGP_BALBcJ_G0031859.1 mouse_genomes_project 7 23795046 23800832 + MGP_BALBcJ_P0082388 B9d2 protein_coding protein_coding MGP_BALBcJ_T0082389.1 MGP_BALBcJ_G0031859.1 mouse_genomes_project 7 23795104 23797919 + MGP_BALBcJ_P0082389 B9d2 protein_coding protein_coding MGP_BALBcJ_T0082390.1 MGP_BALBcJ_G0031859.1 mouse_genomes_project 7 23795122 23797690 + MGP_BALBcJ_P0082390 B9d2 protein_coding protein_coding MGP_BALBcJ_T0082391.1 MGP_BALBcJ_G0031859.1 mouse_genomes_project 7 23795424 23800832 + MGP_BALBcJ_P0082391 B9d2 protein_coding protein_coding MGP_BALBcJ_T0083040.1 MGP_BALBcJ_G0032018.1 mouse_genomes_project 7 29012117 29021329 - MGP_BALBcJ_P0083040 Cox6b1 protein_coding protein_coding MGP_BALBcJ_T0083603.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819756 43823429 + MGP_BALBcJ_P0083603 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083604.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819782 43821955 + Josd2 protein_coding retained_intron MGP_BALBcJ_T0083605.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819798 43823426 + MGP_BALBcJ_P0083605 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083606.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819799 43823428 + MGP_BALBcJ_P0083606 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083607.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819812 43823313 + MGP_BALBcJ_P0083607 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083608.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819815 43823439 + MGP_BALBcJ_P0083608 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083609.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819819 43821089 + Josd2 protein_coding retained_intron MGP_BALBcJ_T0083610.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819821 43823425 + MGP_BALBcJ_P0083610 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083611.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819826 43821211 + Josd2 protein_coding retained_intron MGP_BALBcJ_T0083612.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819848 43823398 + MGP_BALBcJ_P0083612 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083613.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819852 43821126 + Josd2 protein_coding retained_intron MGP_BALBcJ_T0083614.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819861 43822953 + MGP_BALBcJ_P0083614 Josd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083615.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819865 43821625 + Josd2 protein_coding processed_transcript MGP_BALBcJ_T0083616.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819865 43823428 + MGP_BALBcJ_P0083616 Josd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083617.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819870 43823420 + MGP_BALBcJ_P0083617 Josd2 protein_coding protein_coding MGP_BALBcJ_T0083618.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819927 43823429 + Josd2 protein_coding retained_intron MGP_BALBcJ_T0083619.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43819958 43820747 + Josd2 protein_coding retained_intron MGP_BALBcJ_T0083620.1 MGP_BALBcJ_G0032154.1 mouse_genomes_project 7 43820602 43823380 + Josd2 protein_coding processed_transcript MGP_BALBcJ_T0002230.1 MGP_BALBcJ_G0002142.1 mouse_genomes_project 7 55495794 55497538 - TEC TEC MGP_BALBcJ_T0100070.1 MGP_BALBcJ_G0038106.1 mouse_genomes_project 7 63198081 63198182 + Gm22228 snRNA snRNA MGP_BALBcJ_T0086109.1 MGP_BALBcJ_G0032881.1 mouse_genomes_project 7 117829214 118087333 + Xylt1 protein_coding retained_intron MGP_BALBcJ_T0086110.1 MGP_BALBcJ_G0032881.1 mouse_genomes_project 7 117829214 118126060 + MGP_BALBcJ_P0086110 Xylt1 protein_coding protein_coding MGP_BALBcJ_T0086111.1 MGP_BALBcJ_G0032881.1 mouse_genomes_project 7 117926837 118001138 + Xylt1 protein_coding retained_intron MGP_BALBcJ_T0015776.1 MGP_BALBcJ_G0013873.1 mouse_genomes_project 7 43111156 43111461 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008809.1 MGP_BALBcJ_G0007114.1 mouse_genomes_project 7 32956770 32960464 - Gm12762 lincRNA lincRNA MGP_BALBcJ_T0081544.1 MGP_BALBcJ_G0031585.1 mouse_genomes_project 7 3491828 3525164 + MGP_BALBcJ_P0081544 Smim17 protein_coding protein_coding MGP_BALBcJ_T0081545.1 MGP_BALBcJ_G0031585.1 mouse_genomes_project 7 3491861 3501682 + Smim17 protein_coding processed_transcript MGP_BALBcJ_T0081547.1 MGP_BALBcJ_G0031585.1 mouse_genomes_project 7 3509494 3527807 + MGP_BALBcJ_P0081547 Smim17 protein_coding protein_coding MGP_BALBcJ_T0008954.1 MGP_BALBcJ_G0007218.1 mouse_genomes_project 7 99195177 99201914 - Gm26705 lincRNA lincRNA MGP_BALBcJ_T0083583.1 MGP_BALBcJ_G0032150.1 mouse_genomes_project 7 43710031 43725315 - MGP_BALBcJ_P0083583 1700008O03Rik protein_coding protein_coding MGP_BALBcJ_T0083584.1 MGP_BALBcJ_G0032150.1 mouse_genomes_project 7 43710087 43724799 - 1700008O03Rik protein_coding retained_intron MGP_BALBcJ_T0083585.1 MGP_BALBcJ_G0032150.1 mouse_genomes_project 7 43710225 43723885 - MGP_BALBcJ_P0083585 1700008O03Rik protein_coding protein_coding MGP_BALBcJ_T0083586.1 MGP_BALBcJ_G0032150.1 mouse_genomes_project 7 43712655 43736003 - 1700008O03Rik protein_coding processed_transcript MGP_BALBcJ_T0083587.1 MGP_BALBcJ_G0032150.1 mouse_genomes_project 7 43729208 43736139 - 1700008O03Rik protein_coding processed_transcript MGP_BALBcJ_T0084747.1 MGP_BALBcJ_G0032410.1 mouse_genomes_project 7 80591074 80605369 + MGP_BALBcJ_P0084747 Zscan2 protein_coding protein_coding MGP_BALBcJ_T0084748.1 MGP_BALBcJ_G0032410.1 mouse_genomes_project 7 80591105 80593614 + MGP_BALBcJ_P0084748 Zscan2 protein_coding protein_coding MGP_BALBcJ_T0084749.1 MGP_BALBcJ_G0032410.1 mouse_genomes_project 7 80591107 80606288 + MGP_BALBcJ_P0084749 Zscan2 protein_coding protein_coding MGP_BALBcJ_T0084750.1 MGP_BALBcJ_G0032410.1 mouse_genomes_project 7 80592262 80607105 + MGP_BALBcJ_P0084750 Zscan2 protein_coding protein_coding MGP_BALBcJ_T0084751.1 MGP_BALBcJ_G0032410.1 mouse_genomes_project 7 80593050 80605498 + MGP_BALBcJ_P0084751 Zscan2 protein_coding protein_coding MGP_BALBcJ_T0101328.1 MGP_BALBcJ_G0039364.1 mouse_genomes_project 7 58883501 58883580 - snoRNA snoRNA MGP_BALBcJ_T0081598.1 MGP_BALBcJ_G0031624.1 mouse_genomes_project 7 9768332 9775931 - MGP_BALBcJ_P0081598 Zfp551 protein_coding protein_coding MGP_BALBcJ_T0081599.1 MGP_BALBcJ_G0031624.1 mouse_genomes_project 7 9770128 9775668 - MGP_BALBcJ_P0081599 Zfp551 protein_coding protein_coding MGP_BALBcJ_T0081600.1 MGP_BALBcJ_G0031624.1 mouse_genomes_project 7 9770281 9775619 - Zfp551 protein_coding processed_transcript MGP_BALBcJ_T0082708.1 MGP_BALBcJ_G0031946.1 mouse_genomes_project 7 27096296 27106429 + MGP_BALBcJ_P0082708 Rinl protein_coding protein_coding MGP_BALBcJ_T0011659.1 MGP_BALBcJ_G0009784.1 mouse_genomes_project 7 10728576 10728844 + Gm23499 misc_RNA misc_RNA MGP_BALBcJ_T0015714.1 MGP_BALBcJ_G0013811.1 mouse_genomes_project 7 15770931 15771630 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081939.1 MGP_BALBcJ_G0031737.1 mouse_genomes_project 7 16909195 16916130 + MGP_BALBcJ_P0081939 Dmwd protein_coding protein_coding MGP_BALBcJ_T0081940.1 MGP_BALBcJ_G0031737.1 mouse_genomes_project 7 16909226 16916130 + MGP_BALBcJ_P0081940 Dmwd protein_coding protein_coding MGP_BALBcJ_T0081941.1 MGP_BALBcJ_G0031737.1 mouse_genomes_project 7 16910954 16916129 + Dmwd protein_coding processed_transcript MGP_BALBcJ_T0081942.1 MGP_BALBcJ_G0031737.1 mouse_genomes_project 7 16910987 16915856 + Dmwd protein_coding processed_transcript MGP_BALBcJ_T0102735.1 MGP_BALBcJ_G0040550.1 mouse_genomes_project 7 32649111 32656123 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087300.1 MGP_BALBcJ_G0033112.1 mouse_genomes_project 7 135330953 135845197 + MGP_BALBcJ_P0087300 Dock1 protein_coding protein_coding MGP_BALBcJ_T0102747.1 MGP_BALBcJ_G0040562.1 mouse_genomes_project 7 43318451 43320488 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087189.1 MGP_BALBcJ_G0033089.1 mouse_genomes_project 7 132136161 132138220 + MGP_BALBcJ_P0087189 Hmx3 protein_coding protein_coding MGP_BALBcJ_T0082446.1 MGP_BALBcJ_G0031875.1 mouse_genomes_project 7 24920473 24935806 + MGP_BALBcJ_P0082446 Cyp2b19 protein_coding protein_coding MGP_BALBcJ_T0082447.1 MGP_BALBcJ_G0031875.1 mouse_genomes_project 7 24920494 24928779 + Cyp2b19 protein_coding retained_intron MGP_BALBcJ_T0082448.1 MGP_BALBcJ_G0031875.1 mouse_genomes_project 7 24929723 24934567 + Cyp2b19 protein_coding retained_intron MGP_BALBcJ_T0015738.1 MGP_BALBcJ_G0013835.1 mouse_genomes_project 7 26153961 26156245 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099014.1 MGP_BALBcJ_G0037056.1 mouse_genomes_project 7 119964597 119966898 - Gm26967 sense_intronic sense_intronic MGP_BALBcJ_T0081505.1 MGP_BALBcJ_G0031569.1 mouse_genomes_project 7 2171578 2172862 - MGP_BALBcJ_P0081505 Vmn1r55 protein_coding protein_coding MGP_BALBcJ_T0081922.1 MGP_BALBcJ_G0031731.1 mouse_genomes_project 7 16819721 16821284 + MGP_BALBcJ_P0081922 Nanos2 protein_coding protein_coding MGP_BALBcJ_T0002289.1 MGP_BALBcJ_G0002200.1 mouse_genomes_project 7 122584038 122586867 + TEC TEC MGP_BALBcJ_T0081981.1 MGP_BALBcJ_G0031746.1 mouse_genomes_project 7 17056293 17067935 + MGP_BALBcJ_P0081981 Gpr4 protein_coding protein_coding MGP_BALBcJ_T0085025.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96080787 96820485 + MGP_BALBcJ_P0085025 Tenm4 protein_coding protein_coding MGP_BALBcJ_T0085026.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96113082 96343847 + Tenm4 protein_coding retained_intron MGP_BALBcJ_T0085027.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96113132 96405787 + Tenm4 protein_coding processed_transcript MGP_BALBcJ_T0085028.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96113608 96345675 + Tenm4 protein_coding retained_intron MGP_BALBcJ_T0085029.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96113616 96460600 + MGP_BALBcJ_P0085029 Tenm4 protein_coding protein_coding MGP_BALBcJ_T0085030.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96114099 96823016 + MGP_BALBcJ_P0085030 Tenm4 protein_coding protein_coding MGP_BALBcJ_T0085031.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96115133 96820470 + MGP_BALBcJ_P0085031 Tenm4 protein_coding protein_coding MGP_BALBcJ_T0085032.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96429469 96460600 + MGP_BALBcJ_P0085032 Tenm4 protein_coding protein_coding MGP_BALBcJ_T0085033.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96552330 96641055 + Tenm4 protein_coding retained_intron MGP_BALBcJ_T0085034.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96689374 96709279 + MGP_BALBcJ_P0085034 Tenm4 protein_coding protein_coding MGP_BALBcJ_T0085035.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96708186 96710116 + Tenm4 protein_coding processed_transcript MGP_BALBcJ_T0085036.1 MGP_BALBcJ_G0032502.1 mouse_genomes_project 7 96708186 96755174 + Tenm4 protein_coding retained_intron MGP_BALBcJ_T0087366.1 MGP_BALBcJ_G0033134.1 mouse_genomes_project 7 140267027 140270448 - MGP_BALBcJ_P0087366 Nkx6-2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087367.1 MGP_BALBcJ_G0033134.1 mouse_genomes_project 7 140268870 140270441 - MGP_BALBcJ_P0087367 Nkx6-2 protein_coding protein_coding MGP_BALBcJ_T0085772.1 MGP_BALBcJ_G0032769.1 mouse_genomes_project 7 107256221 107257138 - MGP_BALBcJ_P0085772 protein_coding protein_coding MGP_BALBcJ_T0008939.1 MGP_BALBcJ_G0007205.1 mouse_genomes_project 7 83913740 83957513 + Gm26708 lincRNA lincRNA MGP_BALBcJ_T0082615.1 MGP_BALBcJ_G0031919.1 mouse_genomes_project 7 26547523 26548915 + MGP_BALBcJ_P0082615 Eid2 protein_coding protein_coding MGP_BALBcJ_T0008971.1 MGP_BALBcJ_G0007228.1 mouse_genomes_project 7 115360783 115367129 - Gm45020 lincRNA lincRNA MGP_BALBcJ_T0015687.1 MGP_BALBcJ_G0013784.1 mouse_genomes_project 7 10095565 10096552 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018368.1 MGP_BALBcJ_G0015623.1 mouse_genomes_project 7 109775718 109781988 + 1700095J03Rik processed_transcript processed_transcript MGP_BALBcJ_T0081442.1 MGP_BALBcJ_G0031541.1 mouse_genomes_project 7 1729343 1750935 - MGP_BALBcJ_P0081442 Fam71e2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081443.1 MGP_BALBcJ_G0031541.1 mouse_genomes_project 7 1729346 1750935 - MGP_BALBcJ_P0081443 Fam71e2 protein_coding protein_coding MGP_BALBcJ_T0086322.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122576221 122579743 - Ndufab1 protein_coding retained_intron MGP_BALBcJ_T0086323.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122578773 122581048 - Ndufab1 protein_coding retained_intron MGP_BALBcJ_T0086324.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122578788 122581738 - Ndufab1 protein_coding retained_intron MGP_BALBcJ_T0086325.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122579481 122589640 - MGP_BALBcJ_P0086325 Ndufab1 protein_coding protein_coding MGP_BALBcJ_T0086326.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122579549 122589768 - MGP_BALBcJ_P0086326 Ndufab1 protein_coding protein_coding MGP_BALBcJ_T0086327.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122581080 122589611 - Ndufab1 protein_coding retained_intron MGP_BALBcJ_T0086328.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122581987 122589303 - Ndufab1 protein_coding processed_transcript MGP_BALBcJ_T0086329.1 MGP_BALBcJ_G0032938.1 mouse_genomes_project 7 122584418 122589733 - Ndufab1 protein_coding retained_intron MGP_BALBcJ_T0084440.1 MGP_BALBcJ_G0032359.1 mouse_genomes_project 7 73002352 73044940 + MGP_BALBcJ_P0084440 Rgma protein_coding protein_coding MGP_BALBcJ_T0084441.1 MGP_BALBcJ_G0032359.1 mouse_genomes_project 7 73017648 73036367 + MGP_BALBcJ_P0084441 Rgma protein_coding protein_coding MGP_BALBcJ_T0084442.1 MGP_BALBcJ_G0032359.1 mouse_genomes_project 7 73017764 73019736 + Rgma protein_coding retained_intron MGP_BALBcJ_T0083549.1 MGP_BALBcJ_G0032140.1 mouse_genomes_project 7 43291975 43300462 + MGP_BALBcJ_P0083549 protein_coding protein_coding MGP_BALBcJ_T0087713.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664200 142718633 + MGP_BALBcJ_P0087713 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087714.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664200 142713392 + MGP_BALBcJ_P0087714 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087715.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664286 142713559 + MGP_BALBcJ_P0087715 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087716.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664339 142717316 + MGP_BALBcJ_P0087716 Brsk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087717.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664415 142715337 + MGP_BALBcJ_P0087717 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087718.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664418 142718634 + MGP_BALBcJ_P0087718 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087719.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142664418 142716619 + MGP_BALBcJ_P0087719 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087720.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142695923 142716534 + MGP_BALBcJ_P0087720 Brsk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087721.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142699235 142716534 + MGP_BALBcJ_P0087721 Brsk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087722.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142699275 142717558 + MGP_BALBcJ_P0087722 Brsk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087723.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142700096 142716534 + MGP_BALBcJ_P0087723 Brsk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087724.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142707540 142716537 + MGP_BALBcJ_P0087724 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087725.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142707596 142716863 + MGP_BALBcJ_P0087725 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0087726.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142711856 142718454 + Brsk2 protein_coding processed_transcript MGP_BALBcJ_T0087727.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142711884 142717062 + Brsk2 protein_coding processed_transcript MGP_BALBcJ_T0087728.1 MGP_BALBcJ_G0033226.1 mouse_genomes_project 7 142713047 142715828 + MGP_BALBcJ_P0087728 Brsk2 protein_coding protein_coding MGP_BALBcJ_T0084085.1 MGP_BALBcJ_G0032280.1 mouse_genomes_project 7 47956857 47957980 + MGP_BALBcJ_P0084085 Mrgprb8 protein_coding protein_coding MGP_BALBcJ_T0081631.1 MGP_BALBcJ_G0031635.1 mouse_genomes_project 7 10285270 10288928 + MGP_BALBcJ_P0081631 Rnf225 protein_coding protein_coding MGP_BALBcJ_T0081859.1 MGP_BALBcJ_G0031704.1 mouse_genomes_project 7 14551670 14556586 + MGP_BALBcJ_P0081859 Pnmal1 protein_coding protein_coding MGP_BALBcJ_T0087390.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140675878 140689510 - Adam8 protein_coding retained_intron MGP_BALBcJ_T0087391.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140675878 140685383 - Adam8 protein_coding retained_intron MGP_BALBcJ_T0087392.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140675878 140689510 - MGP_BALBcJ_P0087392 Adam8 protein_coding protein_coding MGP_BALBcJ_T0087393.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140675878 140689496 - MGP_BALBcJ_P0087393 Adam8 protein_coding protein_coding MGP_BALBcJ_T0087394.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140676340 140677315 - Adam8 protein_coding processed_transcript MGP_BALBcJ_T0087395.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140680802 140689510 - MGP_BALBcJ_P0087395 Adam8 protein_coding protein_coding MGP_BALBcJ_T0087396.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140684602 140685379 - Adam8 protein_coding processed_transcript MGP_BALBcJ_T0087397.1 MGP_BALBcJ_G0033140.1 mouse_genomes_project 7 140686367 140689456 - MGP_BALBcJ_P0087397 Adam8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101342.1 MGP_BALBcJ_G0039378.1 mouse_genomes_project 7 98863429 98863551 + Gm23479 snoRNA snoRNA MGP_BALBcJ_T0083123.1 MGP_BALBcJ_G0032037.1 mouse_genomes_project 7 29356458 29358123 - MGP_BALBcJ_P0083123 Hamp protein_coding protein_coding MGP_BALBcJ_T0015740.1 MGP_BALBcJ_G0013837.1 mouse_genomes_project 7 28649967 28650360 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002274.1 MGP_BALBcJ_G0002185.1 mouse_genomes_project 7 79540379 79541658 - TEC TEC MGP_BALBcJ_T0102818.1 MGP_BALBcJ_G0040633.1 mouse_genomes_project 7 104147322 104148228 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008950.1 MGP_BALBcJ_G0007214.1 mouse_genomes_project 7 94236964 94239553 - Gm44601 lincRNA lincRNA MGP_BALBcJ_T0010835.1 MGP_BALBcJ_G0008960.1 mouse_genomes_project 7 27399825 27399884 - Mir1963 miRNA miRNA MGP_BALBcJ_T0082049.1 MGP_BALBcJ_G0031766.1 mouse_genomes_project 7 17432340 17435710 + MGP_BALBcJ_P0082049 Zfp296 protein_coding protein_coding MGP_BALBcJ_T0010858.1 MGP_BALBcJ_G0008983.1 mouse_genomes_project 7 61172803 61172883 - Gm23962 miRNA miRNA MGP_BALBcJ_T0082425.1 MGP_BALBcJ_G0031866.1 mouse_genomes_project 7 24185787 24223302 + MGP_BALBcJ_P0082425 Cyp2b9 protein_coding protein_coding MGP_BALBcJ_T0083776.1 MGP_BALBcJ_G0032196.1 mouse_genomes_project 7 44536252 44550096 + MGP_BALBcJ_P0083776 Slc17a7 protein_coding protein_coding MGP_BALBcJ_T0008871.1 MGP_BALBcJ_G0007163.1 mouse_genomes_project 7 67379708 67399370 - 4833412C05Rik lincRNA lincRNA MGP_BALBcJ_T0015825.1 MGP_BALBcJ_G0013922.1 mouse_genomes_project 7 80966017 80966530 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082246.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927047 22932481 + MGP_BALBcJ_P0082246 Rps19 protein_coding protein_coding MGP_BALBcJ_T0082247.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927309 22932481 + MGP_BALBcJ_P0082247 Rps19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082248.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927311 22930436 + Rps19 protein_coding retained_intron MGP_BALBcJ_T0082249.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927312 22932477 + MGP_BALBcJ_P0082249 Rps19 protein_coding protein_coding MGP_BALBcJ_T0082250.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927327 22931627 + MGP_BALBcJ_P0082250 Rps19 protein_coding protein_coding MGP_BALBcJ_T0082251.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927390 22932481 + MGP_BALBcJ_P0082251 Rps19 protein_coding protein_coding MGP_BALBcJ_T0082252.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927489 22931607 + MGP_BALBcJ_P0082252 Rps19 protein_coding protein_coding MGP_BALBcJ_T0082253.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22927593 22931649 + MGP_BALBcJ_P0082253 Rps19 protein_coding protein_coding MGP_BALBcJ_T0082254.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22930866 22932479 + Rps19 protein_coding retained_intron MGP_BALBcJ_T0082255.1 MGP_BALBcJ_G0031833.1 mouse_genomes_project 7 22931416 22932479 + Rps19 protein_coding processed_transcript MGP_BALBcJ_T0086684.1 MGP_BALBcJ_G0032994.1 mouse_genomes_project 7 127355012 127358244 - MGP_BALBcJ_P0086684 Taok2 protein_coding unknown_likely_coding MGP_BALBcJ_T0086685.1 MGP_BALBcJ_G0032994.1 mouse_genomes_project 7 127355015 127374053 - MGP_BALBcJ_P0086685 Taok2 protein_coding protein_coding MGP_BALBcJ_T0086686.1 MGP_BALBcJ_G0032994.1 mouse_genomes_project 7 127355852 127356602 - Taok2 protein_coding retained_intron MGP_BALBcJ_T0086687.1 MGP_BALBcJ_G0032994.1 mouse_genomes_project 7 127358848 127374053 - MGP_BALBcJ_P0086687 Taok2 protein_coding protein_coding MGP_BALBcJ_T0086688.1 MGP_BALBcJ_G0032994.1 mouse_genomes_project 7 127369142 127372305 - Taok2 protein_coding retained_intron MGP_BALBcJ_T0087306.1 MGP_BALBcJ_G0033118.1 mouse_genomes_project 7 136281039 136376414 + MGP_BALBcJ_P0087306 Ptpre protein_coding protein_coding MGP_BALBcJ_T0085472.1 MGP_BALBcJ_G0032595.1 mouse_genomes_project 7 102501070 102528721 + MGP_BALBcJ_P0085472 Rrm1 protein_coding protein_coding MGP_BALBcJ_T0087847.1 MGP_BALBcJ_G0033251.1 mouse_genomes_project 7 143810931 143826261 + MGP_BALBcJ_P0087847 Cd81 protein_coding protein_coding MGP_BALBcJ_T0087848.1 MGP_BALBcJ_G0033251.1 mouse_genomes_project 7 143810986 143823941 + Cd81 protein_coding retained_intron MGP_BALBcJ_T0087849.1 MGP_BALBcJ_G0033251.1 mouse_genomes_project 7 143816895 143825490 + Cd81 protein_coding processed_transcript MGP_BALBcJ_T0087850.1 MGP_BALBcJ_G0033251.1 mouse_genomes_project 7 143824528 143825932 + Cd81 protein_coding retained_intron MGP_BALBcJ_T0085224.1 MGP_BALBcJ_G0032549.1 mouse_genomes_project 7 100128785 100136986 + MGP_BALBcJ_P0085224 Kcne3 protein_coding protein_coding MGP_BALBcJ_T0085225.1 MGP_BALBcJ_G0032549.1 mouse_genomes_project 7 100130825 100136986 + MGP_BALBcJ_P0085225 Kcne3 protein_coding protein_coding MGP_BALBcJ_T0085226.1 MGP_BALBcJ_G0032549.1 mouse_genomes_project 7 100130825 100136986 + MGP_BALBcJ_P0085226 Kcne3 protein_coding protein_coding MGP_BALBcJ_T0085227.1 MGP_BALBcJ_G0032549.1 mouse_genomes_project 7 100130825 100136986 + MGP_BALBcJ_P0085227 Kcne3 protein_coding protein_coding MGP_BALBcJ_T0005183.1 MGP_BALBcJ_G0004413.1 mouse_genomes_project 7 39779467 39865258 - antisense antisense MGP_BALBcJ_T0005184.1 MGP_BALBcJ_G0004413.1 mouse_genomes_project 7 39812429 39861552 - antisense antisense MGP_BALBcJ_T0005185.1 MGP_BALBcJ_G0004413.1 mouse_genomes_project 7 39814540 39838611 - antisense antisense MGP_BALBcJ_T0005186.1 MGP_BALBcJ_G0004413.1 mouse_genomes_project 7 39838793 39861830 - antisense antisense MGP_BALBcJ_T0086896.1 MGP_BALBcJ_G0033034.1 mouse_genomes_project 7 128213935 128229060 - MGP_BALBcJ_P0086896 Ctf2 protein_coding protein_coding MGP_BALBcJ_T0086897.1 MGP_BALBcJ_G0033034.1 mouse_genomes_project 7 128213935 128222793 - MGP_BALBcJ_P0086897 Ctf2 protein_coding protein_coding MGP_BALBcJ_T0008833.1 MGP_BALBcJ_G0007134.1 mouse_genomes_project 7 38737764 38738335 - lincRNA lincRNA MGP_BALBcJ_T0008872.1 MGP_BALBcJ_G0007164.1 mouse_genomes_project 7 67863205 67875602 - Gm16157 lincRNA lincRNA MGP_BALBcJ_T0008873.1 MGP_BALBcJ_G0007164.1 mouse_genomes_project 7 67863818 67877045 - Gm16157 lincRNA lincRNA MGP_BALBcJ_T0101320.1 MGP_BALBcJ_G0039356.1 mouse_genomes_project 7 44498575 44498658 - Snord32a snoRNA snoRNA MGP_BALBcJ_T0081888.1 MGP_BALBcJ_G0031716.1 mouse_genomes_project 7 15914801 15920169 + MGP_BALBcJ_P0081888 Igfl3 protein_coding protein_coding MGP_BALBcJ_T0087966.1 MGP_BALBcJ_G0033280.1 mouse_genomes_project 7 146100514 146109242 + MGP_BALBcJ_P0087966 Mrgprf protein_coding protein_coding MGP_BALBcJ_T0087967.1 MGP_BALBcJ_G0033280.1 mouse_genomes_project 7 146100585 146109034 + MGP_BALBcJ_P0087967 Mrgprf protein_coding protein_coding MGP_BALBcJ_T0008800.1 MGP_BALBcJ_G0007105.1 mouse_genomes_project 7 23932492 23936546 + Gm26707 lincRNA lincRNA MGP_BALBcJ_T0086409.1 MGP_BALBcJ_G0032952.1 mouse_genomes_project 7 123978089 124003386 - MGP_BALBcJ_P0086409 Zkscan2 protein_coding protein_coding MGP_BALBcJ_T0086410.1 MGP_BALBcJ_G0032952.1 mouse_genomes_project 7 123980449 123983635 - Zkscan2 protein_coding retained_intron MGP_BALBcJ_T0086411.1 MGP_BALBcJ_G0032952.1 mouse_genomes_project 7 123982847 123987979 - MGP_BALBcJ_P0086411 Zkscan2 protein_coding protein_coding MGP_BALBcJ_T0086412.1 MGP_BALBcJ_G0032952.1 mouse_genomes_project 7 123997150 124003386 - MGP_BALBcJ_P0086412 Zkscan2 protein_coding protein_coding MGP_BALBcJ_T0086317.1 MGP_BALBcJ_G0032937.1 mouse_genomes_project 7 122554801 122569965 + MGP_BALBcJ_P0086317 Ubfd1 protein_coding protein_coding MGP_BALBcJ_T0086318.1 MGP_BALBcJ_G0032937.1 mouse_genomes_project 7 122554834 122565403 + Ubfd1 protein_coding retained_intron MGP_BALBcJ_T0086319.1 MGP_BALBcJ_G0032937.1 mouse_genomes_project 7 122555066 122559181 + Ubfd1 protein_coding retained_intron MGP_BALBcJ_T0086320.1 MGP_BALBcJ_G0032937.1 mouse_genomes_project 7 122555073 122556606 + Ubfd1 protein_coding processed_transcript MGP_BALBcJ_T0086321.1 MGP_BALBcJ_G0032937.1 mouse_genomes_project 7 122556525 122566382 + MGP_BALBcJ_P0086321 Ubfd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084033.1 MGP_BALBcJ_G0032261.1 mouse_genomes_project 7 46161615 46165074 - MGP_BALBcJ_P0084033 Saa2 protein_coding protein_coding MGP_BALBcJ_T0083913.1 MGP_BALBcJ_G0032229.1 mouse_genomes_project 7 45066980 45083790 - MGP_BALBcJ_P0083913 Sec1 protein_coding protein_coding MGP_BALBcJ_T0081927.1 MGP_BALBcJ_G0031734.1 mouse_genomes_project 7 16845134 16855448 - MGP_BALBcJ_P0081927 Foxa3 protein_coding protein_coding MGP_BALBcJ_T0086998.1 MGP_BALBcJ_G0033054.1 mouse_genomes_project 7 128567455 128627107 + MGP_BALBcJ_P0086998 protein_coding protein_coding MGP_BALBcJ_T0086999.1 MGP_BALBcJ_G0033054.1 mouse_genomes_project 7 128567484 128627106 + MGP_BALBcJ_P0086999 protein_coding protein_coding MGP_BALBcJ_T0087000.1 MGP_BALBcJ_G0033054.1 mouse_genomes_project 7 128567494 128625706 + MGP_BALBcJ_P0087000 protein_coding protein_coding MGP_BALBcJ_T0087002.1 MGP_BALBcJ_G0033054.1 mouse_genomes_project 7 128567498 128626147 + MGP_BALBcJ_P0087002 protein_coding protein_coding MGP_BALBcJ_T0087003.1 MGP_BALBcJ_G0033054.1 mouse_genomes_project 7 128567543 128575844 + protein_coding processed_transcript MGP_BALBcJ_T0087004.1 MGP_BALBcJ_G0033054.1 mouse_genomes_project 7 128567558 128576086 + MGP_BALBcJ_P0087004 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083839.1 MGP_BALBcJ_G0032210.1 mouse_genomes_project 7 44789359 44792842 + MGP_BALBcJ_P0083839 Ntf5 protein_coding protein_coding MGP_BALBcJ_T0084809.1 MGP_BALBcJ_G0032423.1 mouse_genomes_project 7 81319735 81346528 + MGP_BALBcJ_P0084809 Whamm protein_coding protein_coding MGP_BALBcJ_T0011675.1 MGP_BALBcJ_G0009800.1 mouse_genomes_project 7 122947547 122947816 + Gm26414 misc_RNA misc_RNA MGP_BALBcJ_T0002199.1 MGP_BALBcJ_G0002111.1 mouse_genomes_project 7 33094962 33097595 - TEC TEC MGP_BALBcJ_T0085477.1 MGP_BALBcJ_G0032600.1 mouse_genomes_project 7 102613980 102614931 + MGP_BALBcJ_P0085477 Olfr549 protein_coding protein_coding MGP_BALBcJ_T0010909.1 MGP_BALBcJ_G0009034.1 mouse_genomes_project 7 136256921 136257042 + Mir1962 miRNA miRNA MGP_BALBcJ_T0002209.1 MGP_BALBcJ_G0002121.1 mouse_genomes_project 7 36258313 36260616 - TEC TEC MGP_BALBcJ_T0005181.1 MGP_BALBcJ_G0004412.1 mouse_genomes_project 7 36989181 36989397 - D530033B14Rik antisense antisense MGP_BALBcJ_T0005182.1 MGP_BALBcJ_G0004412.1 mouse_genomes_project 7 36989377 37002875 - D530033B14Rik antisense antisense MGP_BALBcJ_T0015844.1 MGP_BALBcJ_G0013941.1 mouse_genomes_project 7 97308024 97308211 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085623.1 MGP_BALBcJ_G0032710.1 mouse_genomes_project 7 104696626 104697595 + MGP_BALBcJ_P0085623 Olfr659 protein_coding protein_coding MGP_BALBcJ_T0085509.1 MGP_BALBcJ_G0032629.1 mouse_genomes_project 7 103175709 103180076 + MGP_BALBcJ_P0085509 protein_coding protein_coding MGP_BALBcJ_T0086849.1 MGP_BALBcJ_G0033026.1 mouse_genomes_project 7 128017695 128065592 + MGP_BALBcJ_P0086849 Gm42715 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086851.1 MGP_BALBcJ_G0033026.1 mouse_genomes_project 7 128058413 128061742 + MGP_BALBcJ_P0086851 Gm42715 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087230.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133591691 133619502 - MGP_BALBcJ_P0087230 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087231.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133591691 133619744 - MGP_BALBcJ_P0087231 Ctbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087232.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133591691 133731956 - MGP_BALBcJ_P0087232 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087233.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133591691 133731755 - MGP_BALBcJ_P0087233 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087234.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133595662 133628368 - MGP_BALBcJ_P0087234 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087235.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133599131 133730790 - MGP_BALBcJ_P0087235 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087236.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133618720 133732061 - Ctbp2 protein_coding processed_transcript MGP_BALBcJ_T0087237.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133618720 133731937 - Ctbp2 protein_coding processed_transcript MGP_BALBcJ_T0087238.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133618910 133731935 - MGP_BALBcJ_P0087238 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087239.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133618984 133721287 - Ctbp2 protein_coding processed_transcript MGP_BALBcJ_T0087240.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133619089 133634698 - Ctbp2 protein_coding processed_transcript MGP_BALBcJ_T0087241.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133619107 133732417 - Ctbp2 protein_coding processed_transcript MGP_BALBcJ_T0087242.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133619375 133731205 - MGP_BALBcJ_P0087242 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087243.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133619417 133732014 - MGP_BALBcJ_P0087243 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087244.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133630298 133732996 - MGP_BALBcJ_P0087244 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087245.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133630316 133720379 - MGP_BALBcJ_P0087245 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087246.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133630317 133731901 - MGP_BALBcJ_P0087246 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087247.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133630360 133732503 - MGP_BALBcJ_P0087247 Ctbp2 protein_coding protein_coding MGP_BALBcJ_T0087248.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133648310 133732503 - Ctbp2 protein_coding processed_transcript MGP_BALBcJ_T0087249.1 MGP_BALBcJ_G0033102.1 mouse_genomes_project 7 133686939 133731773 - Ctbp2 protein_coding retained_intron MGP_BALBcJ_T0083311.1 MGP_BALBcJ_G0032074.1 mouse_genomes_project 7 34144509 34149188 - MGP_BALBcJ_P0083311 Faap24 protein_coding protein_coding MGP_BALBcJ_T0083312.1 MGP_BALBcJ_G0032074.1 mouse_genomes_project 7 34144662 34149065 - Faap24 protein_coding retained_intron MGP_BALBcJ_T0083313.1 MGP_BALBcJ_G0032074.1 mouse_genomes_project 7 34145053 34149060 - MGP_BALBcJ_P0083313 Faap24 protein_coding protein_coding MGP_BALBcJ_T0084933.1 MGP_BALBcJ_G0032475.1 mouse_genomes_project 7 87297290 87375216 - MGP_BALBcJ_P0084933 Tyr protein_coding protein_coding MGP_BALBcJ_T0085852.1 MGP_BALBcJ_G0032829.1 mouse_genomes_project 7 109785875 109832060 - MGP_BALBcJ_P0085852 Trim66 protein_coding protein_coding MGP_BALBcJ_T0085853.1 MGP_BALBcJ_G0032829.1 mouse_genomes_project 7 109790360 109846889 - MGP_BALBcJ_P0085853 Trim66 protein_coding protein_coding MGP_BALBcJ_T0085854.1 MGP_BALBcJ_G0032829.1 mouse_genomes_project 7 109790360 109846889 - MGP_BALBcJ_P0085854 Trim66 protein_coding protein_coding MGP_BALBcJ_T0085855.1 MGP_BALBcJ_G0032829.1 mouse_genomes_project 7 109806583 109812400 - Trim66 protein_coding processed_transcript MGP_BALBcJ_T0083782.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44590217 44607699 + MGP_BALBcJ_P0083782 Tead2 protein_coding protein_coding MGP_BALBcJ_T0083783.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44590255 44595385 + Tead2 protein_coding retained_intron MGP_BALBcJ_T0083784.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44590274 44592671 + Tead2 protein_coding retained_intron MGP_BALBcJ_T0083785.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44590287 44600246 + MGP_BALBcJ_P0083785 Tead2 protein_coding protein_coding MGP_BALBcJ_T0083786.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44590316 44607699 + MGP_BALBcJ_P0083786 Tead2 protein_coding protein_coding MGP_BALBcJ_T0083787.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44591137 44593634 + MGP_BALBcJ_P0083787 Tead2 protein_coding protein_coding MGP_BALBcJ_T0083788.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44591675 44595438 + Tead2 protein_coding retained_intron MGP_BALBcJ_T0083789.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44591675 44607715 + MGP_BALBcJ_P0083789 Tead2 protein_coding protein_coding MGP_BALBcJ_T0083790.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44592503 44598207 + Tead2 protein_coding processed_transcript MGP_BALBcJ_T0083791.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44594368 44595166 + Tead2 protein_coding retained_intron MGP_BALBcJ_T0083792.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44594906 44595661 + Tead2 protein_coding processed_transcript MGP_BALBcJ_T0083793.1 MGP_BALBcJ_G0032201.1 mouse_genomes_project 7 44606227 44607166 + Tead2 protein_coding processed_transcript MGP_BALBcJ_T0102825.1 MGP_BALBcJ_G0040640.1 mouse_genomes_project 7 105218103 105222572 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0086068.1 MGP_BALBcJ_G0032876.1 mouse_genomes_project 7 116463847 116526929 + MGP_BALBcJ_P0086068 protein_coding protein_coding MGP_BALBcJ_T0086069.1 MGP_BALBcJ_G0032876.1 mouse_genomes_project 7 116464161 116528254 + MGP_BALBcJ_P0086069 protein_coding protein_coding MGP_BALBcJ_T0086070.1 MGP_BALBcJ_G0032876.1 mouse_genomes_project 7 116518239 116530911 + MGP_BALBcJ_P0086070 protein_coding protein_coding MGP_BALBcJ_T0086071.1 MGP_BALBcJ_G0032876.1 mouse_genomes_project 7 116518274 116529778 + MGP_BALBcJ_P0086071 protein_coding protein_coding MGP_BALBcJ_T0086072.1 MGP_BALBcJ_G0032876.1 mouse_genomes_project 7 116518304 116530911 + MGP_BALBcJ_P0086072 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082602.1 MGP_BALBcJ_G0031914.1 mouse_genomes_project 7 26336282 26382874 + MGP_BALBcJ_P0082602 Fcgbp protein_coding protein_coding MGP_BALBcJ_T0082603.1 MGP_BALBcJ_G0031914.1 mouse_genomes_project 7 26336282 26382876 + MGP_BALBcJ_P0082603 Fcgbp protein_coding protein_coding MGP_BALBcJ_T0082604.1 MGP_BALBcJ_G0031914.1 mouse_genomes_project 7 26336624 26349020 + Fcgbp protein_coding retained_intron MGP_BALBcJ_T0008912.1 MGP_BALBcJ_G0007194.1 mouse_genomes_project 7 78514305 78516684 + 5330411O13Rik lincRNA lincRNA MGP_BALBcJ_T0082699.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27073427 27095988 + Sirt2 protein_coding processed_transcript MGP_BALBcJ_T0082700.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27073444 27095993 + MGP_BALBcJ_P0082700 Sirt2 protein_coding protein_coding MGP_BALBcJ_T0082701.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27073459 27095988 + MGP_BALBcJ_P0082701 Sirt2 protein_coding protein_coding MGP_BALBcJ_T0082702.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27073946 27095988 + Sirt2 protein_coding processed_transcript MGP_BALBcJ_T0082703.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27084181 27085012 + Sirt2 protein_coding retained_intron MGP_BALBcJ_T0082704.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27084331 27090667 + Sirt2 protein_coding retained_intron MGP_BALBcJ_T0082705.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27091953 27095095 + Sirt2 protein_coding processed_transcript MGP_BALBcJ_T0082706.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27092710 27094954 + Sirt2 protein_coding retained_intron MGP_BALBcJ_T0082707.1 MGP_BALBcJ_G0031945.1 mouse_genomes_project 7 27092884 27095588 + Sirt2 protein_coding retained_intron MGP_BALBcJ_T0085184.1 MGP_BALBcJ_G0032536.1 mouse_genomes_project 7 99412773 99418604 - MGP_BALBcJ_P0085184 Rps3 protein_coding protein_coding MGP_BALBcJ_T0085185.1 MGP_BALBcJ_G0032536.1 mouse_genomes_project 7 99412781 99418517 - MGP_BALBcJ_P0085185 Rps3 protein_coding protein_coding MGP_BALBcJ_T0085186.1 MGP_BALBcJ_G0032536.1 mouse_genomes_project 7 99413758 99418516 - Rps3 protein_coding retained_intron MGP_BALBcJ_T0085187.1 MGP_BALBcJ_G0032536.1 mouse_genomes_project 7 99414575 99418500 - Rps3 protein_coding retained_intron MGP_BALBcJ_T0087945.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145378613 145528668 - MGP_BALBcJ_P0087945 Ano1 protein_coding protein_coding MGP_BALBcJ_T0087946.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145378613 145528645 - MGP_BALBcJ_P0087946 Ano1 protein_coding protein_coding MGP_BALBcJ_T0087947.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145378617 145528694 - MGP_BALBcJ_P0087947 Ano1 protein_coding protein_coding MGP_BALBcJ_T0087948.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145385508 145398905 - Ano1 protein_coding retained_intron MGP_BALBcJ_T0087949.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145412645 145460288 - MGP_BALBcJ_P0087949 Ano1 protein_coding protein_coding MGP_BALBcJ_T0087950.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145441485 145542031 - MGP_BALBcJ_P0087950 Ano1 protein_coding protein_coding MGP_BALBcJ_T0087951.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145445081 145460285 - Ano1 protein_coding retained_intron MGP_BALBcJ_T0087952.1 MGP_BALBcJ_G0033273.1 mouse_genomes_project 7 145446587 145469743 - MGP_BALBcJ_P0087952 Ano1 protein_coding protein_coding MGP_BALBcJ_T0087436.1 MGP_BALBcJ_G0033155.1 mouse_genomes_project 7 140932534 140987943 + MGP_BALBcJ_P0087436 5830411N06Rik protein_coding protein_coding MGP_BALBcJ_T0087437.1 MGP_BALBcJ_G0033155.1 mouse_genomes_project 7 140932611 140990093 + MGP_BALBcJ_P0087437 5830411N06Rik protein_coding protein_coding MGP_BALBcJ_T0087438.1 MGP_BALBcJ_G0033155.1 mouse_genomes_project 7 140932614 140990093 + MGP_BALBcJ_P0087438 5830411N06Rik protein_coding protein_coding MGP_BALBcJ_T0085625.1 MGP_BALBcJ_G0032712.1 mouse_genomes_project 7 104796782 104799159 - MGP_BALBcJ_P0085625 protein_coding protein_coding MGP_BALBcJ_T0087304.1 MGP_BALBcJ_G0033116.1 mouse_genomes_project 7 136100938 136104187 + MGP_BALBcJ_P0087304 Foxi2 protein_coding protein_coding MGP_BALBcJ_T0084150.1 MGP_BALBcJ_G0032299.1 mouse_genomes_project 7 51589207 51597934 - MGP_BALBcJ_P0084150 Svip protein_coding protein_coding MGP_BALBcJ_T0085490.1 MGP_BALBcJ_G0032612.1 mouse_genomes_project 7 102775790 102776784 - MGP_BALBcJ_P0085490 Olfr33 protein_coding protein_coding MGP_BALBcJ_T0082661.1 MGP_BALBcJ_G0031932.1 mouse_genomes_project 7 26735497 26743043 + MGP_BALBcJ_P0082661 Lrfn1 protein_coding protein_coding MGP_BALBcJ_T0082662.1 MGP_BALBcJ_G0031932.1 mouse_genomes_project 7 26735611 26746525 + MGP_BALBcJ_P0082662 Lrfn1 protein_coding protein_coding MGP_BALBcJ_T0082663.1 MGP_BALBcJ_G0031932.1 mouse_genomes_project 7 26735701 26744170 + Lrfn1 protein_coding retained_intron MGP_BALBcJ_T0082664.1 MGP_BALBcJ_G0031932.1 mouse_genomes_project 7 26742415 26746460 + MGP_BALBcJ_P0082664 Lrfn1 protein_coding protein_coding MGP_BALBcJ_T0082665.1 MGP_BALBcJ_G0031932.1 mouse_genomes_project 7 26742415 26752644 + MGP_BALBcJ_P0082665 Lrfn1 protein_coding protein_coding MGP_BALBcJ_T0008914.1 MGP_BALBcJ_G0007196.1 mouse_genomes_project 7 78551076 78554035 - Gm44730 lincRNA lincRNA MGP_BALBcJ_T0087902.1 MGP_BALBcJ_G0033265.1 mouse_genomes_project 7 144570656 144576612 - MGP_BALBcJ_P0087902 Mrgpre protein_coding protein_coding MGP_BALBcJ_T0002271.1 MGP_BALBcJ_G0002182.1 mouse_genomes_project 7 79217559 79217896 + TEC TEC MGP_BALBcJ_T0083431.1 MGP_BALBcJ_G0032098.1 mouse_genomes_project 7 40631329 40647793 + protein_coding processed_transcript MGP_BALBcJ_T0083432.1 MGP_BALBcJ_G0032098.1 mouse_genomes_project 7 40631360 40716672 + MGP_BALBcJ_P0083432 protein_coding protein_coding MGP_BALBcJ_T0083433.1 MGP_BALBcJ_G0032098.1 mouse_genomes_project 7 40631423 40651236 + MGP_BALBcJ_P0083433 protein_coding protein_coding MGP_BALBcJ_T0083434.1 MGP_BALBcJ_G0032098.1 mouse_genomes_project 7 40647857 40651259 + protein_coding retained_intron MGP_BALBcJ_T0015846.1 MGP_BALBcJ_G0013943.1 mouse_genomes_project 7 97563321 97563799 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084934.1 MGP_BALBcJ_G0032476.1 mouse_genomes_project 7 87487436 88020622 + MGP_BALBcJ_P0084934 Grm5 protein_coding protein_coding MGP_BALBcJ_T0084935.1 MGP_BALBcJ_G0032476.1 mouse_genomes_project 7 87487436 88020622 + MGP_BALBcJ_P0084935 Grm5 protein_coding protein_coding MGP_BALBcJ_T0084936.1 MGP_BALBcJ_G0032476.1 mouse_genomes_project 7 87689417 87695927 + Grm5 protein_coding processed_transcript MGP_BALBcJ_T0084937.1 MGP_BALBcJ_G0032476.1 mouse_genomes_project 7 87689417 88024659 + MGP_BALBcJ_P0084937 Grm5 protein_coding protein_coding MGP_BALBcJ_T0084938.1 MGP_BALBcJ_G0032476.1 mouse_genomes_project 7 87689417 88021406 + MGP_BALBcJ_P0084938 Grm5 protein_coding protein_coding MGP_BALBcJ_T0010810.1 MGP_BALBcJ_G0008935.1 mouse_genomes_project 7 119733 119813 + Mir293 miRNA miRNA MGP_BALBcJ_T0084443.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73053544 73170355 - MGP_BALBcJ_P0084443 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084444.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73053600 73095239 - MGP_BALBcJ_P0084444 Chd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084445.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73056894 73074134 - MGP_BALBcJ_P0084445 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084446.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73076144 73082493 - MGP_BALBcJ_P0084446 Chd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084447.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73078713 73088639 - Chd2 protein_coding processed_transcript MGP_BALBcJ_T0084448.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73101254 73107676 - Chd2 protein_coding processed_transcript MGP_BALBcJ_T0084449.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73101260 73107678 - MGP_BALBcJ_P0084449 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084450.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73101261 73105502 - Chd2 protein_coding retained_intron MGP_BALBcJ_T0084451.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73124543 73128954 - MGP_BALBcJ_P0084451 Chd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084452.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73126478 73128873 - MGP_BALBcJ_P0084452 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084453.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73127816 73170354 - MGP_BALBcJ_P0084453 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084454.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73128774 73130405 - Chd2 protein_coding retained_intron MGP_BALBcJ_T0084455.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73134699 73166230 - MGP_BALBcJ_P0084455 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084456.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73134729 73170345 - MGP_BALBcJ_P0084456 Chd2 protein_coding protein_coding MGP_BALBcJ_T0084457.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73166698 73170439 - Chd2 protein_coding retained_intron MGP_BALBcJ_T0084458.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73167962 73170355 - Chd2 protein_coding processed_transcript MGP_BALBcJ_T0084459.1 MGP_BALBcJ_G0032360.1 mouse_genomes_project 7 73168406 73170134 - Chd2 protein_coding processed_transcript MGP_BALBcJ_T0005243.1 MGP_BALBcJ_G0004453.1 mouse_genomes_project 7 104403812 104404722 - antisense antisense MGP_BALBcJ_T0015766.1 MGP_BALBcJ_G0013863.1 mouse_genomes_project 7 40697458 40697713 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081803.1 MGP_BALBcJ_G0031692.1 mouse_genomes_project 7 14251315 14255883 - MGP_BALBcJ_P0081803 Ceacam15 protein_coding protein_coding MGP_BALBcJ_T0011664.1 MGP_BALBcJ_G0009789.1 mouse_genomes_project 7 39307720 39307992 + Gm24910 misc_RNA misc_RNA MGP_BALBcJ_T0084082.1 MGP_BALBcJ_G0032277.1 mouse_genomes_project 7 47596763 47606423 - MGP_BALBcJ_P0084082 Mrgprx1 protein_coding protein_coding MGP_BALBcJ_T0102814.1 MGP_BALBcJ_G0040629.1 mouse_genomes_project 7 103819826 103820111 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0086836.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128009955 128025146 + Srcap protein_coding retained_intron MGP_BALBcJ_T0086837.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128009955 128027638 + MGP_BALBcJ_P0086837 Srcap protein_coding protein_coding MGP_BALBcJ_T0086838.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128009974 128020948 + MGP_BALBcJ_P0086838 Srcap protein_coding protein_coding MGP_BALBcJ_T0086839.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128009999 128023433 + MGP_BALBcJ_P0086839 Srcap protein_coding protein_coding MGP_BALBcJ_T0086840.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128010084 128013387 + Srcap protein_coding processed_transcript MGP_BALBcJ_T0086841.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128010273 128013974 + Srcap protein_coding processed_transcript MGP_BALBcJ_T0086842.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128010437 128037560 + MGP_BALBcJ_P0086842 Srcap protein_coding protein_coding MGP_BALBcJ_T0086843.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128010964 128034700 + Srcap protein_coding retained_intron MGP_BALBcJ_T0086844.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128010964 128034700 + MGP_BALBcJ_P0086844 Srcap protein_coding protein_coding MGP_BALBcJ_T0086845.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128010990 128059744 + MGP_BALBcJ_P0086845 Srcap protein_coding protein_coding MGP_BALBcJ_T0086846.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128013970 128018081 + Srcap protein_coding retained_intron MGP_BALBcJ_T0086847.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128014125 128059098 + MGP_BALBcJ_P0086847 Srcap protein_coding protein_coding MGP_BALBcJ_T0086848.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128014125 128059098 + MGP_BALBcJ_P0086848 Srcap protein_coding protein_coding MGP_BALBcJ_T0086850.1 MGP_BALBcJ_G0033025.1 mouse_genomes_project 7 128032083 128034116 + Srcap protein_coding retained_intron MGP_BALBcJ_T0084616.1 MGP_BALBcJ_G0032390.1 mouse_genomes_project 7 79584946 79631727 - MGP_BALBcJ_P0084616 Ap3s2 protein_coding protein_coding MGP_BALBcJ_T0084617.1 MGP_BALBcJ_G0032390.1 mouse_genomes_project 7 79592138 79631674 - MGP_BALBcJ_P0084617 Ap3s2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087865.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143864673 143907858 + MGP_BALBcJ_P0087865 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0087866.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143864826 143907858 + MGP_BALBcJ_P0087866 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0087867.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143865056 143907858 + MGP_BALBcJ_P0087867 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0087868.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143865565 144193156 + MGP_BALBcJ_P0087868 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0087869.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143865862 144192239 + MGP_BALBcJ_P0087869 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0087870.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143866662 143907858 + MGP_BALBcJ_P0087870 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0087871.1 MGP_BALBcJ_G0033254.1 mouse_genomes_project 7 143867505 143907858 + MGP_BALBcJ_P0087871 Kcnq1 protein_coding protein_coding MGP_BALBcJ_T0083377.1 MGP_BALBcJ_G0032084.1 mouse_genomes_project 7 35474849 35553321 + MGP_BALBcJ_P0083377 Tshz3 protein_coding protein_coding MGP_BALBcJ_T0102752.1 MGP_BALBcJ_G0040567.1 mouse_genomes_project 7 43389649 43391889 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100111.1 MGP_BALBcJ_G0038147.1 mouse_genomes_project 7 143189734 143189842 + Gm26143 snRNA snRNA MGP_BALBcJ_T0086493.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126904525 126922724 + Rabep2 protein_coding retained_intron MGP_BALBcJ_T0086494.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126904865 126912440 + Rabep2 protein_coding retained_intron MGP_BALBcJ_T0086495.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126904898 126922732 + MGP_BALBcJ_P0086495 Rabep2 protein_coding protein_coding MGP_BALBcJ_T0086496.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126905148 126914720 + MGP_BALBcJ_P0086496 Rabep2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086497.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126905194 126914711 + MGP_BALBcJ_P0086497 Rabep2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086498.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126914479 126915043 + Rabep2 protein_coding retained_intron MGP_BALBcJ_T0086499.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126916596 126921507 + Rabep2 protein_coding retained_intron MGP_BALBcJ_T0086500.1 MGP_BALBcJ_G0032967.1 mouse_genomes_project 7 126921622 126926068 + Rabep2 protein_coding retained_intron MGP_BALBcJ_T0085478.1 MGP_BALBcJ_G0032601.1 mouse_genomes_project 7 102616211 102623744 - MGP_BALBcJ_P0085478 Trim21 protein_coding protein_coding MGP_BALBcJ_T0085479.1 MGP_BALBcJ_G0032601.1 mouse_genomes_project 7 102616211 102623744 - MGP_BALBcJ_P0085479 Trim21 protein_coding protein_coding MGP_BALBcJ_T0085198.1 MGP_BALBcJ_G0032538.1 mouse_genomes_project 7 99560631 99563653 - MGP_BALBcJ_P0085198 Tpbgl protein_coding protein_coding MGP_BALBcJ_T0008854.1 MGP_BALBcJ_G0007149.1 mouse_genomes_project 7 49442434 49443873 - Gm26856 lincRNA lincRNA MGP_BALBcJ_T0005296.1 MGP_BALBcJ_G0004492.1 mouse_genomes_project 7 144369093 144370259 + Gm15579 antisense antisense MGP_BALBcJ_T0101347.1 MGP_BALBcJ_G0039383.1 mouse_genomes_project 7 105768748 105768887 - Gm22504 snoRNA snoRNA MGP_BALBcJ_T0083739.1 MGP_BALBcJ_G0032178.1 mouse_genomes_project 7 44307732 44324054 + MGP_BALBcJ_P0083739 Tsks protein_coding protein_coding MGP_BALBcJ_T0083740.1 MGP_BALBcJ_G0032178.1 mouse_genomes_project 7 44307732 44324054 + MGP_BALBcJ_P0083740 Tsks protein_coding protein_coding MGP_BALBcJ_T0086185.1 MGP_BALBcJ_G0032900.1 mouse_genomes_project 7 119978564 119995913 + MGP_BALBcJ_P0086185 Acsm5 protein_coding protein_coding MGP_BALBcJ_T0083537.1 MGP_BALBcJ_G0032135.1 mouse_genomes_project 7 43071671 43079421 + MGP_BALBcJ_P0083537 Klk6 protein_coding protein_coding MGP_BALBcJ_T0083538.1 MGP_BALBcJ_G0032135.1 mouse_genomes_project 7 43071730 43079177 + MGP_BALBcJ_P0083538 Klk6 protein_coding protein_coding MGP_BALBcJ_T0083539.1 MGP_BALBcJ_G0032135.1 mouse_genomes_project 7 43071742 43075751 + MGP_BALBcJ_P0083539 Klk6 protein_coding protein_coding MGP_BALBcJ_T0083540.1 MGP_BALBcJ_G0032135.1 mouse_genomes_project 7 43072574 43079177 + MGP_BALBcJ_P0083540 Klk6 protein_coding protein_coding MGP_BALBcJ_T0102699.1 MGP_BALBcJ_G0040514.1 mouse_genomes_project 7 11789718 11790289 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081767.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13756631 13763442 - Dhx34 protein_coding retained_intron MGP_BALBcJ_T0081768.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13756631 13781315 - MGP_BALBcJ_P0081768 Dhx34 protein_coding protein_coding MGP_BALBcJ_T0081769.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13756705 13781310 - MGP_BALBcJ_P0081769 Dhx34 protein_coding protein_coding MGP_BALBcJ_T0081770.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13756705 13781271 - MGP_BALBcJ_P0081770 Dhx34 protein_coding protein_coding MGP_BALBcJ_T0081771.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13756705 13781271 - MGP_BALBcJ_P0081771 Dhx34 protein_coding protein_coding MGP_BALBcJ_T0081772.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13756708 13781271 - MGP_BALBcJ_P0081772 Dhx34 protein_coding protein_coding MGP_BALBcJ_T0081773.1 MGP_BALBcJ_G0031681.1 mouse_genomes_project 7 13765228 13772670 - Dhx34 protein_coding processed_transcript MGP_BALBcJ_T0082042.1 MGP_BALBcJ_G0031764.1 mouse_genomes_project 7 17385508 17417345 - MGP_BALBcJ_P0082042 Ppp1r37 protein_coding protein_coding MGP_BALBcJ_T0015881.1 MGP_BALBcJ_G0013978.1 mouse_genomes_project 7 123506621 123507132 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083668.1 MGP_BALBcJ_G0032163.1 mouse_genomes_project 7 43962947 44022783 - MGP_BALBcJ_P0083668 Myh14 protein_coding protein_coding MGP_BALBcJ_T0083669.1 MGP_BALBcJ_G0032163.1 mouse_genomes_project 7 43962947 44022783 - MGP_BALBcJ_P0083669 Myh14 protein_coding protein_coding MGP_BALBcJ_T0084882.1 MGP_BALBcJ_G0032445.1 mouse_genomes_project 7 83645805 83659169 + Mesdc2 protein_coding processed_transcript MGP_BALBcJ_T0084883.1 MGP_BALBcJ_G0032445.1 mouse_genomes_project 7 83653346 83662748 + MGP_BALBcJ_P0084883 Mesdc2 protein_coding protein_coding MGP_BALBcJ_T0084884.1 MGP_BALBcJ_G0032445.1 mouse_genomes_project 7 83653348 83658996 + MGP_BALBcJ_P0084884 Mesdc2 protein_coding protein_coding MGP_BALBcJ_T0084885.1 MGP_BALBcJ_G0032445.1 mouse_genomes_project 7 83653676 83659309 + MGP_BALBcJ_P0084885 Mesdc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087810.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143417464 143424211 - MGP_BALBcJ_P0087810 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087811.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143417467 143426205 - MGP_BALBcJ_P0087811 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087812.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143417467 143424181 - MGP_BALBcJ_P0087812 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087813.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143417467 143427910 - MGP_BALBcJ_P0087813 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087814.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143417541 143419746 - Igf2 protein_coding processed_transcript MGP_BALBcJ_T0087815.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143420471 143433412 - MGP_BALBcJ_P0087815 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087816.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143420764 143428475 - MGP_BALBcJ_P0087816 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087817.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143421067 143422733 - MGP_BALBcJ_P0087817 Igf2 protein_coding protein_coding MGP_BALBcJ_T0087818.1 MGP_BALBcJ_G0033245.1 mouse_genomes_project 7 143422157 143427810 - Igf2 protein_coding retained_intron MGP_BALBcJ_T0086719.1 MGP_BALBcJ_G0033000.1 mouse_genomes_project 7 127477435 127505640 - MGP_BALBcJ_P0086719 Mvp protein_coding protein_coding MGP_BALBcJ_T0086720.1 MGP_BALBcJ_G0033000.1 mouse_genomes_project 7 127489560 127502884 - MGP_BALBcJ_P0086720 Mvp protein_coding protein_coding MGP_BALBcJ_T0086722.1 MGP_BALBcJ_G0033000.1 mouse_genomes_project 7 127500747 127505569 - Mvp protein_coding retained_intron MGP_BALBcJ_T0085639.1 MGP_BALBcJ_G0032725.1 mouse_genomes_project 7 105194957 105195909 + MGP_BALBcJ_P0085639 protein_coding protein_coding MGP_BALBcJ_T0005276.1 MGP_BALBcJ_G0004477.1 mouse_genomes_project 7 128689069 128690787 - Gm45108 antisense antisense MGP_BALBcJ_T0015803.1 MGP_BALBcJ_G0013900.1 mouse_genomes_project 7 67377756 67378761 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085545.1 MGP_BALBcJ_G0032663.1 mouse_genomes_project 7 103911952 103914380 - MGP_BALBcJ_P0085545 Olfr68 protein_coding protein_coding MGP_BALBcJ_T0083512.1 MGP_BALBcJ_G0032123.1 mouse_genomes_project 7 42850598 42862017 + MGP_BALBcJ_P0083512 Zfp819 protein_coding protein_coding MGP_BALBcJ_T0083513.1 MGP_BALBcJ_G0032123.1 mouse_genomes_project 7 42850638 42856486 + MGP_BALBcJ_P0083513 Zfp819 protein_coding protein_coding MGP_BALBcJ_T0083514.1 MGP_BALBcJ_G0032123.1 mouse_genomes_project 7 42850654 42862086 + MGP_BALBcJ_P0083514 Zfp819 protein_coding protein_coding MGP_BALBcJ_T0083515.1 MGP_BALBcJ_G0032123.1 mouse_genomes_project 7 42853336 42861719 + MGP_BALBcJ_P0083515 Zfp819 protein_coding protein_coding MGP_BALBcJ_T0084432.1 MGP_BALBcJ_G0032356.1 mouse_genomes_project 7 69971686 69980611 - MGP_BALBcJ_P0084432 Nr2f2 protein_coding protein_coding MGP_BALBcJ_T0084433.1 MGP_BALBcJ_G0032356.1 mouse_genomes_project 7 69974460 69986982 - MGP_BALBcJ_P0084433 Nr2f2 protein_coding protein_coding MGP_BALBcJ_T0018358.1 MGP_BALBcJ_G0015618.1 mouse_genomes_project 7 80792393 80799463 + Platr32 processed_transcript processed_transcript MGP_BALBcJ_T0005144.1 MGP_BALBcJ_G0004384.1 mouse_genomes_project 7 23273416 23274979 + 4933430L12Rik antisense antisense MGP_BALBcJ_T0085476.1 MGP_BALBcJ_G0032599.1 mouse_genomes_project 7 102594630 102595575 + MGP_BALBcJ_P0085476 Olfr547 protein_coding protein_coding MGP_BALBcJ_T0002314.1 MGP_BALBcJ_G0002225.1 mouse_genomes_project 7 143882913 143883148 + TEC TEC MGP_BALBcJ_T0084465.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 73913293 74199683 - MGP_BALBcJ_P0084465 Slco3a1 protein_coding protein_coding MGP_BALBcJ_T0084466.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 73919731 74199664 - MGP_BALBcJ_P0084466 Slco3a1 protein_coding protein_coding MGP_BALBcJ_T0084467.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 73933244 74199830 - MGP_BALBcJ_P0084467 Slco3a1 protein_coding protein_coding MGP_BALBcJ_T0084468.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 73970489 73985987 - Slco3a1 protein_coding retained_intron MGP_BALBcJ_T0084469.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 73985541 74199524 - MGP_BALBcJ_P0084469 Slco3a1 protein_coding protein_coding MGP_BALBcJ_T0084470.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 73998185 74145991 - Slco3a1 protein_coding retained_intron MGP_BALBcJ_T0084471.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 74145894 74197644 - MGP_BALBcJ_P0084471 Slco3a1 protein_coding protein_coding MGP_BALBcJ_T0084472.1 MGP_BALBcJ_G0032363.1 mouse_genomes_project 7 74146041 74175625 - Slco3a1 protein_coding processed_transcript MGP_BALBcJ_T0085607.1 MGP_BALBcJ_G0032700.1 mouse_genomes_project 7 104451347 104460048 - MGP_BALBcJ_P0085607 Trim30c protein_coding protein_coding MGP_BALBcJ_T0087400.1 MGP_BALBcJ_G0033143.1 mouse_genomes_project 7 140727322 140730255 - MGP_BALBcJ_P0087400 Msx3 protein_coding protein_coding MGP_BALBcJ_T0085935.1 MGP_BALBcJ_G0032850.1 mouse_genomes_project 7 111225531 111286448 - MGP_BALBcJ_P0085935 Mrvi1 protein_coding protein_coding MGP_BALBcJ_T0085936.1 MGP_BALBcJ_G0032850.1 mouse_genomes_project 7 111225537 111305616 - MGP_BALBcJ_P0085936 Mrvi1 protein_coding protein_coding MGP_BALBcJ_T0085937.1 MGP_BALBcJ_G0032850.1 mouse_genomes_project 7 111228624 111305321 - MGP_BALBcJ_P0085937 Mrvi1 protein_coding protein_coding MGP_BALBcJ_T0085938.1 MGP_BALBcJ_G0032850.1 mouse_genomes_project 7 111279840 111283748 - Mrvi1 protein_coding processed_transcript MGP_BALBcJ_T0085939.1 MGP_BALBcJ_G0032850.1 mouse_genomes_project 7 111284394 111286717 - Mrvi1 protein_coding retained_intron MGP_BALBcJ_T0085940.1 MGP_BALBcJ_G0032850.1 mouse_genomes_project 7 111286429 111341486 - MGP_BALBcJ_P0085940 Mrvi1 protein_coding protein_coding MGP_BALBcJ_T0081289.1 MGP_BALBcJ_G0031515.1 mouse_genomes_project 7 635891 649347 - MGP_BALBcJ_P0081289 protein_coding protein_coding MGP_BALBcJ_T0084860.1 MGP_BALBcJ_G0032438.1 mouse_genomes_project 7 83305949 83312616 - MGP_BALBcJ_P0084860 protein_coding protein_coding MGP_BALBcJ_T0083627.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43848993 43853558 + MGP_BALBcJ_P0083627 Fam71e1 protein_coding protein_coding MGP_BALBcJ_T0083628.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849000 43852755 + Fam71e1 protein_coding retained_intron MGP_BALBcJ_T0083629.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849011 43849561 + MGP_BALBcJ_P0083629 Fam71e1 protein_coding protein_coding MGP_BALBcJ_T0083630.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849070 43853551 + MGP_BALBcJ_P0083630 Fam71e1 protein_coding protein_coding MGP_BALBcJ_T0083631.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849080 43853551 + MGP_BALBcJ_P0083631 Fam71e1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083632.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849084 43853904 + Fam71e1 protein_coding retained_intron MGP_BALBcJ_T0083633.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849084 43850424 + Fam71e1 protein_coding retained_intron MGP_BALBcJ_T0083634.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43849106 43852784 + Fam71e1 protein_coding retained_intron MGP_BALBcJ_T0083635.1 MGP_BALBcJ_G0032156.1 mouse_genomes_project 7 43852842 43853550 + Fam71e1 protein_coding processed_transcript MGP_BALBcJ_T0082785.1 MGP_BALBcJ_G0031961.1 mouse_genomes_project 7 27517166 27560759 - protein_coding processed_transcript MGP_BALBcJ_T0082786.1 MGP_BALBcJ_G0031961.1 mouse_genomes_project 7 27517169 27576887 - protein_coding retained_intron MGP_BALBcJ_T0082787.1 MGP_BALBcJ_G0031961.1 mouse_genomes_project 7 27517281 27576919 - MGP_BALBcJ_P0082787 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082788.1 MGP_BALBcJ_G0031961.1 mouse_genomes_project 7 27545651 27571997 - MGP_BALBcJ_P0082788 protein_coding protein_coding MGP_BALBcJ_T0082789.1 MGP_BALBcJ_G0031961.1 mouse_genomes_project 7 27569553 27576904 - protein_coding processed_transcript MGP_BALBcJ_T0081879.1 MGP_BALBcJ_G0031710.1 mouse_genomes_project 7 14802746 14814913 + MGP_BALBcJ_P0081879 Psg29 protein_coding protein_coding MGP_BALBcJ_T0083901.1 MGP_BALBcJ_G0032223.1 mouse_genomes_project 7 45001407 45002991 - MGP_BALBcJ_P0083901 Fgf21 protein_coding protein_coding MGP_BALBcJ_T0087482.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141593791 141610408 + MGP_BALBcJ_P0087482 Psmd13 protein_coding protein_coding MGP_BALBcJ_T0087483.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594237 141609678 + Psmd13 protein_coding retained_intron MGP_BALBcJ_T0087484.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594252 141599089 + Psmd13 protein_coding processed_transcript MGP_BALBcJ_T0087485.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594261 141598687 + Psmd13 protein_coding processed_transcript MGP_BALBcJ_T0087486.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594275 141601543 + Psmd13 protein_coding processed_transcript MGP_BALBcJ_T0087487.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594290 141599002 + Psmd13 protein_coding retained_intron MGP_BALBcJ_T0087488.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594295 141610054 + MGP_BALBcJ_P0087488 Psmd13 protein_coding protein_coding MGP_BALBcJ_T0087489.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594295 141609999 + MGP_BALBcJ_P0087489 Psmd13 protein_coding protein_coding MGP_BALBcJ_T0087490.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141594295 141610054 + MGP_BALBcJ_P0087490 Psmd13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087491.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141595323 141598255 + Psmd13 protein_coding processed_transcript MGP_BALBcJ_T0087492.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141601223 141610161 + MGP_BALBcJ_P0087492 Psmd13 protein_coding protein_coding MGP_BALBcJ_T0087493.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141602212 141609606 + Psmd13 protein_coding retained_intron MGP_BALBcJ_T0087494.1 MGP_BALBcJ_G0033181.1 mouse_genomes_project 7 141606453 141610409 + MGP_BALBcJ_P0087494 Psmd13 protein_coding protein_coding MGP_BALBcJ_T0083638.1 MGP_BALBcJ_G0032158.1 mouse_genomes_project 7 43879206 43885281 - MGP_BALBcJ_P0083638 Spib protein_coding protein_coding MGP_BALBcJ_T0083639.1 MGP_BALBcJ_G0032158.1 mouse_genomes_project 7 43881173 43884486 - MGP_BALBcJ_P0083639 Spib protein_coding protein_coding MGP_BALBcJ_T0083640.1 MGP_BALBcJ_G0032158.1 mouse_genomes_project 7 43881173 43885263 - MGP_BALBcJ_P0083640 Spib protein_coding protein_coding MGP_BALBcJ_T0085809.1 MGP_BALBcJ_G0032799.1 mouse_genomes_project 7 108407337 108408402 + MGP_BALBcJ_P0085809 Olfr483 protein_coding protein_coding MGP_BALBcJ_T0083126.1 MGP_BALBcJ_G0032038.1 mouse_genomes_project 7 29372528 29388183 - MGP_BALBcJ_P0083126 Lsr protein_coding protein_coding MGP_BALBcJ_T0083127.1 MGP_BALBcJ_G0032038.1 mouse_genomes_project 7 29372533 29388221 - MGP_BALBcJ_P0083127 Lsr protein_coding protein_coding MGP_BALBcJ_T0083128.1 MGP_BALBcJ_G0032038.1 mouse_genomes_project 7 29372535 29388184 - MGP_BALBcJ_P0083128 Lsr protein_coding protein_coding MGP_BALBcJ_T0083129.1 MGP_BALBcJ_G0032038.1 mouse_genomes_project 7 29372537 29388079 - MGP_BALBcJ_P0083129 Lsr protein_coding protein_coding MGP_BALBcJ_T0083130.1 MGP_BALBcJ_G0032038.1 mouse_genomes_project 7 29373020 29388172 - MGP_BALBcJ_P0083130 Lsr protein_coding protein_coding MGP_BALBcJ_T0081510.1 MGP_BALBcJ_G0031574.1 mouse_genomes_project 7 3076607 3079837 - MGP_BALBcJ_P0081510 Vmn1r65 protein_coding protein_coding MGP_BALBcJ_T0010906.1 MGP_BALBcJ_G0009031.1 mouse_genomes_project 7 128998708 128998833 - Gm24365 miRNA miRNA MGP_BALBcJ_T0085828.1 MGP_BALBcJ_G0032818.1 mouse_genomes_project 7 109082522 109083452 + MGP_BALBcJ_P0085828 Olfr513 protein_coding protein_coding MGP_BALBcJ_T0005233.1 MGP_BALBcJ_G0004447.1 mouse_genomes_project 7 96702980 96713097 - Gm15413 antisense antisense MGP_BALBcJ_T0015685.1 MGP_BALBcJ_G0013782.1 mouse_genomes_project 7 9875813 9876777 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010916.1 MGP_BALBcJ_G0009041.1 mouse_genomes_project 7 142706565 142706628 + Mir3104 miRNA miRNA MGP_BALBcJ_T0010914.1 MGP_BALBcJ_G0009039.1 mouse_genomes_project 7 141952711 141952821 - Mir210 miRNA miRNA MGP_BALBcJ_T0081550.1 MGP_BALBcJ_G0031589.1 mouse_genomes_project 7 3572876 3573924 + MGP_BALBcJ_P0081550 Olfr1346 protein_coding protein_coding MGP_BALBcJ_T0087477.1 MGP_BALBcJ_G0033180.1 mouse_genomes_project 7 141575014 141593693 - MGP_BALBcJ_P0087477 Sirt3 protein_coding protein_coding MGP_BALBcJ_T0087478.1 MGP_BALBcJ_G0033180.1 mouse_genomes_project 7 141575014 141594133 - MGP_BALBcJ_P0087478 Sirt3 protein_coding protein_coding MGP_BALBcJ_T0087479.1 MGP_BALBcJ_G0033180.1 mouse_genomes_project 7 141576364 141589971 - MGP_BALBcJ_P0087479 Sirt3 protein_coding protein_coding MGP_BALBcJ_T0087480.1 MGP_BALBcJ_G0033180.1 mouse_genomes_project 7 141580833 141593693 - MGP_BALBcJ_P0087480 Sirt3 protein_coding protein_coding MGP_BALBcJ_T0087481.1 MGP_BALBcJ_G0033180.1 mouse_genomes_project 7 141588257 141593693 - MGP_BALBcJ_P0087481 Sirt3 protein_coding protein_coding MGP_BALBcJ_T0010894.1 MGP_BALBcJ_G0009019.1 mouse_genomes_project 7 111159758 111159865 + miRNA miRNA MGP_BALBcJ_T0102785.1 MGP_BALBcJ_G0040600.1 mouse_genomes_project 7 85043646 85081081 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087166.1 MGP_BALBcJ_G0033083.1 mouse_genomes_project 7 131925391 131933301 - MGP_BALBcJ_P0087166 1700007K09Rik protein_coding protein_coding MGP_BALBcJ_T0087167.1 MGP_BALBcJ_G0033083.1 mouse_genomes_project 7 131925546 131931110 - MGP_BALBcJ_P0087167 1700007K09Rik protein_coding protein_coding MGP_BALBcJ_T0015674.1 MGP_BALBcJ_G0013771.1 mouse_genomes_project 7 1401905 1402368 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100073.1 MGP_BALBcJ_G0038109.1 mouse_genomes_project 7 75334571 75334655 + Gm25282 snRNA snRNA MGP_BALBcJ_T0087584.1 MGP_BALBcJ_G0033205.1 mouse_genomes_project 7 142030133 142033127 + MGP_BALBcJ_P0087584 Drd4 protein_coding protein_coding MGP_BALBcJ_T0082376.1 MGP_BALBcJ_G0031857.1 mouse_genomes_project 7 23772724 23781593 + MGP_BALBcJ_P0082376 Exosc5 protein_coding protein_coding MGP_BALBcJ_T0082377.1 MGP_BALBcJ_G0031857.1 mouse_genomes_project 7 23772751 23784921 + MGP_BALBcJ_P0082377 Exosc5 protein_coding protein_coding MGP_BALBcJ_T0082378.1 MGP_BALBcJ_G0031857.1 mouse_genomes_project 7 23772772 23781593 + Exosc5 protein_coding retained_intron MGP_BALBcJ_T0082379.1 MGP_BALBcJ_G0031857.1 mouse_genomes_project 7 23772772 23779867 + MGP_BALBcJ_P0082379 Exosc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082380.1 MGP_BALBcJ_G0031857.1 mouse_genomes_project 7 23772778 23777962 + MGP_BALBcJ_P0082380 Exosc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082381.1 MGP_BALBcJ_G0031857.1 mouse_genomes_project 7 23777947 23780335 + Exosc5 protein_coding retained_intron MGP_BALBcJ_T0010842.1 MGP_BALBcJ_G0008967.1 mouse_genomes_project 7 33824277 33824347 + Gm25033 miRNA miRNA MGP_BALBcJ_T0085704.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766473 105770048 + MGP_BALBcJ_P0085704 protein_coding protein_coding MGP_BALBcJ_T0085705.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766865 105768261 + MGP_BALBcJ_P0085705 protein_coding protein_coding MGP_BALBcJ_T0085706.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766969 105777240 + MGP_BALBcJ_P0085706 protein_coding protein_coding MGP_BALBcJ_T0085708.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766981 105768203 + protein_coding retained_intron MGP_BALBcJ_T0085709.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766981 105778220 + MGP_BALBcJ_P0085709 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085710.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766984 105768257 + MGP_BALBcJ_P0085710 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085711.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766987 105782289 + MGP_BALBcJ_P0085711 protein_coding protein_coding MGP_BALBcJ_T0085712.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105766988 105770043 + MGP_BALBcJ_P0085712 protein_coding protein_coding MGP_BALBcJ_T0085714.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105767006 105768167 + protein_coding processed_transcript MGP_BALBcJ_T0085715.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105767007 105768243 + MGP_BALBcJ_P0085715 protein_coding protein_coding MGP_BALBcJ_T0085716.1 MGP_BALBcJ_G0032745.1 mouse_genomes_project 7 105767088 105767702 + protein_coding retained_intron MGP_BALBcJ_T0015725.1 MGP_BALBcJ_G0013822.1 mouse_genomes_project 7 23484428 23485380 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082957.1 MGP_BALBcJ_G0032005.1 mouse_genomes_project 7 28829855 28839884 - Kirrel2 protein_coding retained_intron MGP_BALBcJ_T0082958.1 MGP_BALBcJ_G0032005.1 mouse_genomes_project 7 28829857 28839765 - MGP_BALBcJ_P0082958 Kirrel2 protein_coding protein_coding MGP_BALBcJ_T0082959.1 MGP_BALBcJ_G0032005.1 mouse_genomes_project 7 28830389 28833159 - MGP_BALBcJ_P0082959 Kirrel2 protein_coding protein_coding MGP_BALBcJ_T0082960.1 MGP_BALBcJ_G0032005.1 mouse_genomes_project 7 28830437 28839084 - MGP_BALBcJ_P0082960 Kirrel2 protein_coding protein_coding MGP_BALBcJ_T0082961.1 MGP_BALBcJ_G0032005.1 mouse_genomes_project 7 28839218 28839925 - Kirrel2 protein_coding processed_transcript MGP_BALBcJ_T0084911.1 MGP_BALBcJ_G0032461.1 mouse_genomes_project 7 86194903 86195863 - MGP_BALBcJ_P0084911 Olfr305 protein_coding protein_coding MGP_BALBcJ_T0002316.1 MGP_BALBcJ_G0002227.1 mouse_genomes_project 7 144062942 144066862 + TEC TEC MGP_BALBcJ_T0009010.1 MGP_BALBcJ_G0007250.1 mouse_genomes_project 7 127798805 127804234 + lincRNA lincRNA MGP_BALBcJ_T0009011.1 MGP_BALBcJ_G0007250.1 mouse_genomes_project 7 127799291 127804646 + lincRNA lincRNA MGP_BALBcJ_T0084304.1 MGP_BALBcJ_G0032331.1 mouse_genomes_project 7 64326458 64729114 - MGP_BALBcJ_P0084304 Fam189a1 protein_coding protein_coding MGP_BALBcJ_T0084305.1 MGP_BALBcJ_G0032331.1 mouse_genomes_project 7 64326480 64344013 - Fam189a1 protein_coding processed_transcript MGP_BALBcJ_T0084306.1 MGP_BALBcJ_G0032331.1 mouse_genomes_project 7 64338088 64496838 - MGP_BALBcJ_P0084306 Fam189a1 protein_coding protein_coding MGP_BALBcJ_T0084307.1 MGP_BALBcJ_G0032331.1 mouse_genomes_project 7 64357050 64728960 - MGP_BALBcJ_P0084307 Fam189a1 protein_coding protein_coding MGP_BALBcJ_T0084308.1 MGP_BALBcJ_G0032331.1 mouse_genomes_project 7 64393375 64426686 - Fam189a1 protein_coding retained_intron MGP_BALBcJ_T0085188.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99470932 99543015 + MGP_BALBcJ_P0085188 Arrb1 protein_coding protein_coding MGP_BALBcJ_T0085189.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99470932 99543015 + MGP_BALBcJ_P0085189 Arrb1 protein_coding protein_coding MGP_BALBcJ_T0085190.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99471128 99539821 + MGP_BALBcJ_P0085190 Arrb1 protein_coding protein_coding MGP_BALBcJ_T0085191.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99471170 99525178 + MGP_BALBcJ_P0085191 Arrb1 protein_coding protein_coding MGP_BALBcJ_T0085192.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99475135 99524373 + MGP_BALBcJ_P0085192 Arrb1 protein_coding protein_coding MGP_BALBcJ_T0085193.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99509550 99524365 + Arrb1 protein_coding processed_transcript MGP_BALBcJ_T0085194.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99530821 99537388 + Arrb1 protein_coding retained_intron MGP_BALBcJ_T0085195.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99530842 99537402 + Arrb1 protein_coding retained_intron MGP_BALBcJ_T0085196.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99530849 99536042 + Arrb1 protein_coding retained_intron MGP_BALBcJ_T0085197.1 MGP_BALBcJ_G0032537.1 mouse_genomes_project 7 99530851 99536322 + MGP_BALBcJ_P0085197 Arrb1 protein_coding protein_coding MGP_BALBcJ_T0083253.1 MGP_BALBcJ_G0032063.1 mouse_genomes_project 7 32980291 32980747 + MGP_BALBcJ_P0083253 Gm6096 protein_coding protein_coding MGP_BALBcJ_T0081530.1 MGP_BALBcJ_G0031581.1 mouse_genomes_project 7 3374591 3401719 + MGP_BALBcJ_P0081530 Zfp667 protein_coding protein_coding MGP_BALBcJ_T0081531.1 MGP_BALBcJ_G0031581.1 mouse_genomes_project 7 3374605 3394687 + Zfp667 protein_coding processed_transcript MGP_BALBcJ_T0081532.1 MGP_BALBcJ_G0031581.1 mouse_genomes_project 7 3374626 3401698 + MGP_BALBcJ_P0081532 Zfp667 protein_coding protein_coding MGP_BALBcJ_T0081533.1 MGP_BALBcJ_G0031581.1 mouse_genomes_project 7 3375874 3401518 + MGP_BALBcJ_P0081533 Zfp667 protein_coding protein_coding MGP_BALBcJ_T0081534.1 MGP_BALBcJ_G0031581.1 mouse_genomes_project 7 3378524 3388465 + Zfp667 protein_coding retained_intron MGP_BALBcJ_T0015768.1 MGP_BALBcJ_G0013865.1 mouse_genomes_project 7 40764057 40764757 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086444.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126568453 126618250 - MGP_BALBcJ_P0086444 Xpo6 protein_coding unknown_likely_coding MGP_BALBcJ_T0086445.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570105 126669828 - MGP_BALBcJ_P0086445 Xpo6 protein_coding protein_coding MGP_BALBcJ_T0086446.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570106 126669735 - MGP_BALBcJ_P0086446 Xpo6 protein_coding protein_coding MGP_BALBcJ_T0086447.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570111 126578730 - Xpo6 protein_coding retained_intron MGP_BALBcJ_T0086448.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570111 126629391 - Xpo6 protein_coding processed_transcript MGP_BALBcJ_T0086449.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570111 126573487 - MGP_BALBcJ_P0086449 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086450.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570124 126575845 - MGP_BALBcJ_P0086450 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086451.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570459 126573700 - Xpo6 protein_coding retained_intron MGP_BALBcJ_T0086452.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126570736 126575808 - MGP_BALBcJ_P0086452 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086453.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126573435 126581543 - MGP_BALBcJ_P0086453 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086454.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126577199 126581475 - MGP_BALBcJ_P0086454 Xpo6 protein_coding protein_coding MGP_BALBcJ_T0086455.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126581548 126609082 - MGP_BALBcJ_P0086455 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086456.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126587093 126669749 - Xpo6 protein_coding retained_intron MGP_BALBcJ_T0086457.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126596841 126621759 - MGP_BALBcJ_P0086457 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086458.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126609062 126629532 - MGP_BALBcJ_P0086458 Xpo6 protein_coding protein_coding MGP_BALBcJ_T0086459.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126618019 126629540 - Xpo6 protein_coding processed_transcript MGP_BALBcJ_T0086460.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126620411 126669669 - Xpo6 protein_coding processed_transcript MGP_BALBcJ_T0086461.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126620980 126669794 - MGP_BALBcJ_P0086461 Xpo6 protein_coding protein_coding MGP_BALBcJ_T0086462.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126629527 126669255 - MGP_BALBcJ_P0086462 Xpo6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086463.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126637787 126650520 - Xpo6 protein_coding processed_transcript MGP_BALBcJ_T0086464.1 MGP_BALBcJ_G0032961.1 mouse_genomes_project 7 126648656 126655830 - Xpo6 protein_coding retained_intron MGP_BALBcJ_T0085707.1 MGP_BALBcJ_G0032746.1 mouse_genomes_project 7 105766979 105785582 + Dnhd1 protein_coding processed_transcript MGP_BALBcJ_T0085713.1 MGP_BALBcJ_G0032746.1 mouse_genomes_project 7 105766996 105810860 + Dnhd1 protein_coding processed_transcript MGP_BALBcJ_T0085717.1 MGP_BALBcJ_G0032746.1 mouse_genomes_project 7 105776928 105850539 + MGP_BALBcJ_P0085717 Dnhd1 protein_coding protein_coding MGP_BALBcJ_T0085718.1 MGP_BALBcJ_G0032746.1 mouse_genomes_project 7 105777309 105850507 + MGP_BALBcJ_P0085718 Dnhd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0085719.1 MGP_BALBcJ_G0032746.1 mouse_genomes_project 7 105800359 105804584 + Dnhd1 protein_coding retained_intron MGP_BALBcJ_T0085720.1 MGP_BALBcJ_G0032746.1 mouse_genomes_project 7 105804407 105810853 + MGP_BALBcJ_P0085720 Dnhd1 protein_coding protein_coding MGP_BALBcJ_T0081969.1 MGP_BALBcJ_G0031744.1 mouse_genomes_project 7 16990172 17000699 - MGP_BALBcJ_P0081969 Gipr protein_coding protein_coding MGP_BALBcJ_T0081970.1 MGP_BALBcJ_G0031744.1 mouse_genomes_project 7 16990175 17000699 - Gipr protein_coding retained_intron MGP_BALBcJ_T0081971.1 MGP_BALBcJ_G0031744.1 mouse_genomes_project 7 16996861 17000699 - MGP_BALBcJ_P0081971 Gipr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081972.1 MGP_BALBcJ_G0031744.1 mouse_genomes_project 7 16997028 16999666 - Gipr protein_coding retained_intron MGP_BALBcJ_T0083763.1 MGP_BALBcJ_G0032193.1 mouse_genomes_project 7 44502382 44508054 - MGP_BALBcJ_P0083763 protein_coding protein_coding MGP_BALBcJ_T0082226.1 MGP_BALBcJ_G0031823.1 mouse_genomes_project 7 22655306 22659807 + MGP_BALBcJ_P0082226 Lypd3 protein_coding protein_coding MGP_BALBcJ_T0009013.1 MGP_BALBcJ_G0007252.1 mouse_genomes_project 7 128188124 128196015 + Gm44514 lincRNA lincRNA MGP_BALBcJ_T0009014.1 MGP_BALBcJ_G0007252.1 mouse_genomes_project 7 128192868 128196625 + Gm44514 lincRNA lincRNA MGP_BALBcJ_T0087921.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 144791453 145213069 + MGP_BALBcJ_P0087921 Shank2 protein_coding protein_coding MGP_BALBcJ_T0087922.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 144821350 144922835 + MGP_BALBcJ_P0087922 Shank2 protein_coding unknown_likely_coding MGP_BALBcJ_T0087923.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 144821350 144922977 + MGP_BALBcJ_P0087923 Shank2 protein_coding unknown_likely_coding MGP_BALBcJ_T0087924.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 144968151 145213069 + MGP_BALBcJ_P0087924 Shank2 protein_coding protein_coding MGP_BALBcJ_T0087925.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 145077749 145211256 + MGP_BALBcJ_P0087925 Shank2 protein_coding protein_coding MGP_BALBcJ_T0087926.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 145077803 145213057 + Shank2 protein_coding retained_intron MGP_BALBcJ_T0087927.1 MGP_BALBcJ_G0033269.1 mouse_genomes_project 7 145206420 145209245 + Shank2 protein_coding processed_transcript MGP_BALBcJ_T0085554.1 MGP_BALBcJ_G0032670.1 mouse_genomes_project 7 104044092 104045028 - MGP_BALBcJ_P0085554 Olfr66 protein_coding protein_coding MGP_BALBcJ_T0085733.1 MGP_BALBcJ_G0032749.1 mouse_genomes_project 7 105867853 105872822 - MGP_BALBcJ_P0085733 Taf10 protein_coding protein_coding MGP_BALBcJ_T0085741.1 MGP_BALBcJ_G0032749.1 mouse_genomes_project 7 105871356 105872543 - Taf10 protein_coding retained_intron MGP_BALBcJ_T0085742.1 MGP_BALBcJ_G0032749.1 mouse_genomes_project 7 105871366 105872071 - Taf10 protein_coding retained_intron MGP_BALBcJ_T0085743.1 MGP_BALBcJ_G0032749.1 mouse_genomes_project 7 105871697 105872803 - Taf10 protein_coding retained_intron MGP_BALBcJ_T0002303.1 MGP_BALBcJ_G0002214.1 mouse_genomes_project 7 127665264 127666512 - TEC TEC MGP_BALBcJ_T0083879.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44905467 44934017 + MGP_BALBcJ_P0083879 Plekha4 protein_coding protein_coding MGP_BALBcJ_T0083880.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44905467 44938677 + MGP_BALBcJ_P0083880 Plekha4 protein_coding protein_coding MGP_BALBcJ_T0083881.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44909186 44938677 + MGP_BALBcJ_P0083881 Plekha4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083882.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44909233 44912916 + MGP_BALBcJ_P0083882 Plekha4 protein_coding protein_coding MGP_BALBcJ_T0083883.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44909298 44938677 + MGP_BALBcJ_P0083883 Plekha4 protein_coding protein_coding MGP_BALBcJ_T0083884.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44909762 44938480 + MGP_BALBcJ_P0083884 Plekha4 protein_coding protein_coding MGP_BALBcJ_T0083885.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44934282 44938677 + Plekha4 protein_coding processed_transcript MGP_BALBcJ_T0083886.1 MGP_BALBcJ_G0032220.1 mouse_genomes_project 7 44937137 44938677 + Plekha4 protein_coding retained_intron MGP_BALBcJ_T0084132.1 MGP_BALBcJ_G0032293.1 mouse_genomes_project 7 49569155 50119781 + MGP_BALBcJ_P0084132 Nell1 protein_coding protein_coding MGP_BALBcJ_T0084133.1 MGP_BALBcJ_G0032293.1 mouse_genomes_project 7 49569155 50444504 + MGP_BALBcJ_P0084133 Nell1 protein_coding protein_coding MGP_BALBcJ_T0084134.1 MGP_BALBcJ_G0032293.1 mouse_genomes_project 7 49569360 49846054 + Nell1 protein_coding retained_intron MGP_BALBcJ_T0084135.1 MGP_BALBcJ_G0032293.1 mouse_genomes_project 7 49569625 50442604 + MGP_BALBcJ_P0084135 Nell1 protein_coding protein_coding MGP_BALBcJ_T0084136.1 MGP_BALBcJ_G0032293.1 mouse_genomes_project 7 49688061 49803674 + Nell1 protein_coding processed_transcript MGP_BALBcJ_T0082874.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28474899 28484172 + Zfp260 protein_coding processed_transcript MGP_BALBcJ_T0082875.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28474916 28487504 + MGP_BALBcJ_P0082875 Zfp260 protein_coding protein_coding MGP_BALBcJ_T0082876.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28475284 28479989 + Zfp260 protein_coding retained_intron MGP_BALBcJ_T0082877.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28475291 28484640 + MGP_BALBcJ_P0082877 Zfp260 protein_coding protein_coding MGP_BALBcJ_T0082878.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28475300 28487501 + Zfp260 protein_coding processed_transcript MGP_BALBcJ_T0082879.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28475307 28487496 + MGP_BALBcJ_P0082879 Zfp260 protein_coding protein_coding MGP_BALBcJ_T0082880.1 MGP_BALBcJ_G0031984.1 mouse_genomes_project 7 28478037 28479978 + Zfp260 protein_coding retained_intron MGP_BALBcJ_T0082168.1 MGP_BALBcJ_G0031808.1 mouse_genomes_project 7 22307966 22323307 - MGP_BALBcJ_P0082168 Zfp94 protein_coding protein_coding MGP_BALBcJ_T0082169.1 MGP_BALBcJ_G0031808.1 mouse_genomes_project 7 22308058 22323368 - MGP_BALBcJ_P0082169 Zfp94 protein_coding protein_coding MGP_BALBcJ_T0082170.1 MGP_BALBcJ_G0031808.1 mouse_genomes_project 7 22309888 22316100 - Zfp94 protein_coding retained_intron MGP_BALBcJ_T0082171.1 MGP_BALBcJ_G0031808.1 mouse_genomes_project 7 22315281 22323326 - Zfp94 protein_coding processed_transcript MGP_BALBcJ_T0082172.1 MGP_BALBcJ_G0031808.1 mouse_genomes_project 7 22315574 22323310 - Zfp94 protein_coding retained_intron MGP_BALBcJ_T0082173.1 MGP_BALBcJ_G0031808.1 mouse_genomes_project 7 22315689 22323284 - Zfp94 protein_coding processed_transcript MGP_BALBcJ_T0102676.1 MGP_BALBcJ_G0040491.1 mouse_genomes_project 7 7782644 7783535 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085551.1 MGP_BALBcJ_G0032667.1 mouse_genomes_project 7 103995557 103996805 - MGP_BALBcJ_P0085551 Hbb-bh2 protein_coding protein_coding MGP_BALBcJ_T0002305.1 MGP_BALBcJ_G0002216.1 mouse_genomes_project 7 127951237 127952639 + TEC TEC MGP_BALBcJ_T0005163.1 MGP_BALBcJ_G0004398.1 mouse_genomes_project 7 29131116 29140890 + Gm26935 antisense antisense MGP_BALBcJ_T0010877.1 MGP_BALBcJ_G0009002.1 mouse_genomes_project 7 63859977 63860094 - Mir6416 miRNA miRNA MGP_BALBcJ_T0087071.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129130489 129190621 + Inpp5f protein_coding processed_transcript MGP_BALBcJ_T0087072.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129130521 129215405 + MGP_BALBcJ_P0087072 Inpp5f protein_coding protein_coding MGP_BALBcJ_T0087073.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129178008 129196496 + Inpp5f protein_coding retained_intron MGP_BALBcJ_T0087074.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129182689 129187580 + Inpp5f protein_coding processed_transcript MGP_BALBcJ_T0087075.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129186699 129187785 + Inpp5f protein_coding retained_intron MGP_BALBcJ_T0087076.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129198707 129215254 + Inpp5f protein_coding retained_intron MGP_BALBcJ_T0087077.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129207461 129212631 + MGP_BALBcJ_P0087077 Inpp5f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087078.1 MGP_BALBcJ_G0033068.1 mouse_genomes_project 7 129208221 129215425 + MGP_BALBcJ_P0087078 Inpp5f protein_coding protein_coding MGP_BALBcJ_T0101316.1 MGP_BALBcJ_G0039352.1 mouse_genomes_project 7 44494218 44494305 - Snord35b snoRNA snoRNA MGP_BALBcJ_T0015663.1 MGP_BALBcJ_G0013760.1 mouse_genomes_project 7 189981 190861 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100049.1 MGP_BALBcJ_G0038085.1 mouse_genomes_project 7 13794567 13794690 - Gm26473 snRNA snRNA MGP_BALBcJ_T0087169.1 MGP_BALBcJ_G0033085.1 mouse_genomes_project 7 131946899 131966733 - MGP_BALBcJ_P0087169 2310057M21Rik protein_coding protein_coding MGP_BALBcJ_T0084060.1 MGP_BALBcJ_G0032266.1 mouse_genomes_project 7 46288381 46306041 + MGP_BALBcJ_P0084060 Ldhc protein_coding protein_coding MGP_BALBcJ_T0084061.1 MGP_BALBcJ_G0032266.1 mouse_genomes_project 7 46288500 46303687 + MGP_BALBcJ_P0084061 Ldhc protein_coding protein_coding MGP_BALBcJ_T0084062.1 MGP_BALBcJ_G0032266.1 mouse_genomes_project 7 46288764 46304373 + MGP_BALBcJ_P0084062 Ldhc protein_coding protein_coding MGP_BALBcJ_T0015805.1 MGP_BALBcJ_G0013902.1 mouse_genomes_project 7 69214155 69215154 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083424.1 MGP_BALBcJ_G0032096.1 mouse_genomes_project 7 40490815 40511131 - MGP_BALBcJ_P0083424 AW146154 protein_coding protein_coding MGP_BALBcJ_T0083425.1 MGP_BALBcJ_G0032096.1 mouse_genomes_project 7 40493273 40494408 - AW146154 protein_coding retained_intron MGP_BALBcJ_T0083426.1 MGP_BALBcJ_G0032096.1 mouse_genomes_project 7 40506564 40510668 - AW146154 protein_coding processed_transcript MGP_BALBcJ_T0084369.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267756 66286201 + MGP_BALBcJ_P0084369 Lins1 protein_coding protein_coding MGP_BALBcJ_T0084370.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267761 66292573 + MGP_BALBcJ_P0084370 Lins1 protein_coding protein_coding MGP_BALBcJ_T0084371.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267767 66286065 + MGP_BALBcJ_P0084371 Lins1 protein_coding protein_coding MGP_BALBcJ_T0084372.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267816 66287746 + Lins1 protein_coding retained_intron MGP_BALBcJ_T0084373.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267825 66295082 + MGP_BALBcJ_P0084373 Lins1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084374.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267825 66292570 + MGP_BALBcJ_P0084374 Lins1 protein_coding protein_coding MGP_BALBcJ_T0084375.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66267838 66292573 + MGP_BALBcJ_P0084375 Lins1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084376.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66285873 66292513 + MGP_BALBcJ_P0084376 Lins1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084377.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66286021 66288219 + MGP_BALBcJ_P0084377 Lins1 protein_coding protein_coding MGP_BALBcJ_T0084378.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66286166 66288408 + MGP_BALBcJ_P0084378 Lins1 protein_coding protein_coding MGP_BALBcJ_T0084379.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66287252 66291676 + MGP_BALBcJ_P0084379 Lins1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084380.1 MGP_BALBcJ_G0032345.1 mouse_genomes_project 7 66287989 66295080 + Lins1 protein_coding retained_intron MGP_BALBcJ_T0008826.1 MGP_BALBcJ_G0007130.1 mouse_genomes_project 7 36102084 36107903 - lincRNA lincRNA MGP_BALBcJ_T0085834.1 MGP_BALBcJ_G0032823.1 mouse_genomes_project 7 109255941 109264235 - MGP_BALBcJ_P0085834 Nlrp10 protein_coding protein_coding MGP_BALBcJ_T0085555.1 MGP_BALBcJ_G0032671.1 mouse_genomes_project 7 104054810 104055734 - MGP_BALBcJ_P0085555 Olfr64 protein_coding protein_coding MGP_BALBcJ_T0085169.1 MGP_BALBcJ_G0032530.1 mouse_genomes_project 7 99087311 99116398 - MGP_BALBcJ_P0085169 Dgat2 protein_coding protein_coding MGP_BALBcJ_T0083420.1 MGP_BALBcJ_G0032094.1 mouse_genomes_project 7 40378637 40405606 - MGP_BALBcJ_P0083420 AI987944 protein_coding protein_coding MGP_BALBcJ_T0083421.1 MGP_BALBcJ_G0032094.1 mouse_genomes_project 7 40378637 40405554 - MGP_BALBcJ_P0083421 AI987944 protein_coding protein_coding MGP_BALBcJ_T0083422.1 MGP_BALBcJ_G0032094.1 mouse_genomes_project 7 40381131 40405673 - MGP_BALBcJ_P0083422 AI987944 protein_coding protein_coding MGP_BALBcJ_T0083914.1 MGP_BALBcJ_G0032230.1 mouse_genomes_project 7 45073313 45083941 + MGP_BALBcJ_P0083914 Ntn5 protein_coding protein_coding MGP_BALBcJ_T0083915.1 MGP_BALBcJ_G0032230.1 mouse_genomes_project 7 45073707 45083944 + MGP_BALBcJ_P0083915 Ntn5 protein_coding protein_coding MGP_BALBcJ_T0083916.1 MGP_BALBcJ_G0032230.1 mouse_genomes_project 7 45073720 45083815 + MGP_BALBcJ_P0083916 Ntn5 protein_coding protein_coding MGP_BALBcJ_T0082605.1 MGP_BALBcJ_G0031915.1 mouse_genomes_project 7 26361369 26364191 - MGP_BALBcJ_P0082605 protein_coding protein_coding MGP_BALBcJ_T0085199.1 MGP_BALBcJ_G0032539.1 mouse_genomes_project 7 99596240 99649874 - MGP_BALBcJ_P0085199 Slco2b1 protein_coding protein_coding MGP_BALBcJ_T0085200.1 MGP_BALBcJ_G0032539.1 mouse_genomes_project 7 99596825 99633970 - MGP_BALBcJ_P0085200 Slco2b1 protein_coding protein_coding MGP_BALBcJ_T0085201.1 MGP_BALBcJ_G0032539.1 mouse_genomes_project 7 99596825 99645680 - MGP_BALBcJ_P0085201 Slco2b1 protein_coding protein_coding MGP_BALBcJ_T0085202.1 MGP_BALBcJ_G0032539.1 mouse_genomes_project 7 99598297 99603370 - MGP_BALBcJ_P0085202 Slco2b1 protein_coding protein_coding MGP_BALBcJ_T0085203.1 MGP_BALBcJ_G0032539.1 mouse_genomes_project 7 99627266 99633789 - MGP_BALBcJ_P0085203 Slco2b1 protein_coding protein_coding MGP_BALBcJ_T0085204.1 MGP_BALBcJ_G0032539.1 mouse_genomes_project 7 99628867 99633743 - MGP_BALBcJ_P0085204 Slco2b1 protein_coding protein_coding MGP_BALBcJ_T0085299.1 MGP_BALBcJ_G0032565.1 mouse_genomes_project 7 100975189 100990808 - MGP_BALBcJ_P0085299 P2ry2 protein_coding protein_coding MGP_BALBcJ_T0085300.1 MGP_BALBcJ_G0032565.1 mouse_genomes_project 7 100975842 100990793 - MGP_BALBcJ_P0085300 P2ry2 protein_coding protein_coding MGP_BALBcJ_T0082800.1 MGP_BALBcJ_G0031966.1 mouse_genomes_project 7 27661922 27665992 + MGP_BALBcJ_P0082800 Ppp1r14a protein_coding protein_coding MGP_BALBcJ_T0082978.1 MGP_BALBcJ_G0032010.1 mouse_genomes_project 7 28938629 28941877 + Hspb6 protein_coding processed_transcript MGP_BALBcJ_T0082979.1 MGP_BALBcJ_G0032010.1 mouse_genomes_project 7 28938971 28941876 + Hspb6 protein_coding processed_transcript MGP_BALBcJ_T0082980.1 MGP_BALBcJ_G0032010.1 mouse_genomes_project 7 28939715 28941880 + MGP_BALBcJ_P0082980 Hspb6 protein_coding protein_coding MGP_BALBcJ_T0082981.1 MGP_BALBcJ_G0032010.1 mouse_genomes_project 7 28940321 28941081 + Hspb6 protein_coding processed_transcript MGP_BALBcJ_T0085301.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101092053 101271845 + MGP_BALBcJ_P0085301 Fchsd2 protein_coding protein_coding MGP_BALBcJ_T0085302.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101092054 101189250 + Fchsd2 protein_coding processed_transcript MGP_BALBcJ_T0085303.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101092059 101271868 + MGP_BALBcJ_P0085303 Fchsd2 protein_coding protein_coding MGP_BALBcJ_T0085304.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101092083 101186092 + Fchsd2 protein_coding retained_intron MGP_BALBcJ_T0085305.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101092158 101176902 + Fchsd2 protein_coding processed_transcript MGP_BALBcJ_T0085306.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101092160 101125430 + Fchsd2 protein_coding retained_intron MGP_BALBcJ_T0085307.1 MGP_BALBcJ_G0032566.1 mouse_genomes_project 7 101229367 101239458 + Fchsd2 protein_coding retained_intron MGP_BALBcJ_T0087221.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133462060 133488303 + MGP_BALBcJ_P0087221 Fam175b protein_coding protein_coding MGP_BALBcJ_T0087222.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133462072 133484273 + MGP_BALBcJ_P0087222 Fam175b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087223.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133462079 133484503 + MGP_BALBcJ_P0087223 Fam175b protein_coding protein_coding MGP_BALBcJ_T0087224.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133462084 133479123 + Fam175b protein_coding retained_intron MGP_BALBcJ_T0087225.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133462084 133488300 + MGP_BALBcJ_P0087225 Fam175b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087226.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133462142 133482006 + Fam175b protein_coding processed_transcript MGP_BALBcJ_T0087227.1 MGP_BALBcJ_G0033100.1 mouse_genomes_project 7 133482766 133488302 + Fam175b protein_coding retained_intron MGP_BALBcJ_T0087177.1 MGP_BALBcJ_G0033087.1 mouse_genomes_project 7 131986713 132011498 - MGP_BALBcJ_P0087177 Ikzf5 protein_coding protein_coding MGP_BALBcJ_T0087178.1 MGP_BALBcJ_G0033087.1 mouse_genomes_project 7 131988429 132011474 - MGP_BALBcJ_P0087178 Ikzf5 protein_coding protein_coding MGP_BALBcJ_T0087179.1 MGP_BALBcJ_G0033087.1 mouse_genomes_project 7 131990585 132011355 - MGP_BALBcJ_P0087179 Ikzf5 protein_coding protein_coding MGP_BALBcJ_T0087180.1 MGP_BALBcJ_G0033087.1 mouse_genomes_project 7 131991454 132011472 - MGP_BALBcJ_P0087180 Ikzf5 protein_coding protein_coding MGP_BALBcJ_T0087181.1 MGP_BALBcJ_G0033087.1 mouse_genomes_project 7 131994760 132010059 - MGP_BALBcJ_P0087181 Ikzf5 protein_coding protein_coding MGP_BALBcJ_T0083495.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42734028 42747930 - MGP_BALBcJ_P0083495 4931406B18Rik protein_coding protein_coding MGP_BALBcJ_T0083496.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42735806 42747624 - MGP_BALBcJ_P0083496 4931406B18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083497.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42736552 42747919 - MGP_BALBcJ_P0083497 4931406B18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083498.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42738658 42746216 - MGP_BALBcJ_P0083498 4931406B18Rik protein_coding protein_coding MGP_BALBcJ_T0083499.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42739740 42747925 - 4931406B18Rik protein_coding retained_intron MGP_BALBcJ_T0083500.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42740388 42747932 - MGP_BALBcJ_P0083500 4931406B18Rik protein_coding protein_coding MGP_BALBcJ_T0083501.1 MGP_BALBcJ_G0032119.1 mouse_genomes_project 7 42743232 42747686 - MGP_BALBcJ_P0083501 4931406B18Rik protein_coding protein_coding MGP_BALBcJ_T0085805.1 MGP_BALBcJ_G0032795.1 mouse_genomes_project 7 108359193 108360304 + MGP_BALBcJ_P0085805 Olfr479 protein_coding protein_coding MGP_BALBcJ_T0005273.1 MGP_BALBcJ_G0004475.1 mouse_genomes_project 7 128102374 128102920 - 1700120K04Rik antisense antisense MGP_BALBcJ_T0084694.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80067245 80081818 - Man2a2 protein_coding retained_intron MGP_BALBcJ_T0084695.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80067245 80089717 - MGP_BALBcJ_P0084695 Man2a2 protein_coding protein_coding MGP_BALBcJ_T0084696.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80069399 80078099 - MGP_BALBcJ_P0084696 Man2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084697.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80073254 80082028 - Man2a2 protein_coding retained_intron MGP_BALBcJ_T0084698.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80077487 80078265 - Man2a2 protein_coding retained_intron MGP_BALBcJ_T0084699.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80078070 80081856 - MGP_BALBcJ_P0084699 Man2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084700.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80078641 80089203 - MGP_BALBcJ_P0084700 Man2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084701.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80078807 80089468 - Man2a2 protein_coding retained_intron MGP_BALBcJ_T0084702.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80081021 80082016 - Man2a2 protein_coding retained_intron MGP_BALBcJ_T0084703.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80087974 80089200 - MGP_BALBcJ_P0084703 Man2a2 protein_coding protein_coding MGP_BALBcJ_T0084704.1 MGP_BALBcJ_G0032404.1 mouse_genomes_project 7 80088002 80089424 - MGP_BALBcJ_P0084704 Man2a2 protein_coding protein_coding MGP_BALBcJ_T0081484.1 MGP_BALBcJ_G0031557.1 mouse_genomes_project 7 2014781 2017761 + MGP_BALBcJ_P0081484 Zfp524 protein_coding protein_coding MGP_BALBcJ_T0083553.1 MGP_BALBcJ_G0032144.1 mouse_genomes_project 7 43317832 43320501 - MGP_BALBcJ_P0083553 protein_coding protein_coding MGP_BALBcJ_T0083554.1 MGP_BALBcJ_G0032144.1 mouse_genomes_project 7 43317832 43320501 - MGP_BALBcJ_P0083554 protein_coding protein_coding MGP_BALBcJ_T0087402.1 MGP_BALBcJ_G0033145.1 mouse_genomes_project 7 140772624 140779484 + MGP_BALBcJ_P0087402 Prap1 protein_coding protein_coding MGP_BALBcJ_T0083747.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44368766 44379503 - Scaf1 protein_coding retained_intron MGP_BALBcJ_T0083748.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44368766 44381893 - MGP_BALBcJ_P0083748 Scaf1 protein_coding protein_coding MGP_BALBcJ_T0083749.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44368766 44379934 - MGP_BALBcJ_P0083749 Scaf1 protein_coding protein_coding MGP_BALBcJ_T0083750.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44376027 44381661 - Scaf1 protein_coding processed_transcript MGP_BALBcJ_T0083751.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44377687 44379091 - Scaf1 protein_coding retained_intron MGP_BALBcJ_T0083752.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44378781 44381387 - MGP_BALBcJ_P0083752 Scaf1 protein_coding protein_coding MGP_BALBcJ_T0083753.1 MGP_BALBcJ_G0032184.1 mouse_genomes_project 7 44379733 44380466 - Scaf1 protein_coding processed_transcript MGP_BALBcJ_T0084550.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79079096 79091477 - MGP_BALBcJ_P0084550 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0084551.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79079097 79091388 - MGP_BALBcJ_P0084551 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0084552.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79079754 79081930 - Rlbp1 protein_coding retained_intron MGP_BALBcJ_T0084553.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79080130 79088541 - MGP_BALBcJ_P0084553 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0084554.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79081610 79090970 - MGP_BALBcJ_P0084554 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0084555.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79084193 79091034 - MGP_BALBcJ_P0084555 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0084556.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79086224 79090903 - MGP_BALBcJ_P0084556 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0084557.1 MGP_BALBcJ_G0032378.1 mouse_genomes_project 7 79088286 79091341 - MGP_BALBcJ_P0084557 Rlbp1 protein_coding protein_coding MGP_BALBcJ_T0086759.1 MGP_BALBcJ_G0033010.1 mouse_genomes_project 7 127624887 127630463 - MGP_BALBcJ_P0086759 Spn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086760.1 MGP_BALBcJ_G0033010.1 mouse_genomes_project 7 127626125 127629215 - MGP_BALBcJ_P0086760 Spn protein_coding protein_coding MGP_BALBcJ_T0086761.1 MGP_BALBcJ_G0033010.1 mouse_genomes_project 7 127626357 127630472 - MGP_BALBcJ_P0086761 Spn protein_coding protein_coding MGP_BALBcJ_T0084964.1 MGP_BALBcJ_G0032485.1 mouse_genomes_project 7 89736525 89767647 - MGP_BALBcJ_P0084964 l7Rn6 protein_coding protein_coding MGP_BALBcJ_T0084965.1 MGP_BALBcJ_G0032485.1 mouse_genomes_project 7 89739395 89767715 - MGP_BALBcJ_P0084965 l7Rn6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084966.1 MGP_BALBcJ_G0032485.1 mouse_genomes_project 7 89739612 89767733 - MGP_BALBcJ_P0084966 l7Rn6 protein_coding protein_coding MGP_BALBcJ_T0084967.1 MGP_BALBcJ_G0032485.1 mouse_genomes_project 7 89740264 89746749 - l7Rn6 protein_coding retained_intron MGP_BALBcJ_T0084968.1 MGP_BALBcJ_G0032485.1 mouse_genomes_project 7 89753153 89767814 - l7Rn6 protein_coding processed_transcript MGP_BALBcJ_T0086916.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294085 128297298 + Hsd3b7 protein_coding retained_intron MGP_BALBcJ_T0086917.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294085 128297298 + Hsd3b7 protein_coding retained_intron MGP_BALBcJ_T0086918.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294095 128295894 + MGP_BALBcJ_P0086918 Hsd3b7 protein_coding protein_coding MGP_BALBcJ_T0086919.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294095 128297298 + MGP_BALBcJ_P0086919 Hsd3b7 protein_coding protein_coding MGP_BALBcJ_T0086920.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294101 128297306 + MGP_BALBcJ_P0086920 Hsd3b7 protein_coding protein_coding MGP_BALBcJ_T0086921.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294117 128295518 + MGP_BALBcJ_P0086921 Hsd3b7 protein_coding protein_coding MGP_BALBcJ_T0086922.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294127 128295766 + MGP_BALBcJ_P0086922 Hsd3b7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086923.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294128 128295719 + Hsd3b7 protein_coding retained_intron MGP_BALBcJ_T0086924.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294139 128295609 + Hsd3b7 protein_coding retained_intron MGP_BALBcJ_T0086925.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294152 128295823 + Hsd3b7 protein_coding retained_intron MGP_BALBcJ_T0086926.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294161 128295534 + MGP_BALBcJ_P0086926 Hsd3b7 protein_coding protein_coding MGP_BALBcJ_T0086927.1 MGP_BALBcJ_G0033039.1 mouse_genomes_project 7 128294437 128295015 + MGP_BALBcJ_P0086927 Hsd3b7 protein_coding protein_coding MGP_BALBcJ_T0085367.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101900889 101913285 - MGP_BALBcJ_P0085367 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085368.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101900889 101906715 - MGP_BALBcJ_P0085368 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085369.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101900889 101913309 - MGP_BALBcJ_P0085369 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085370.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101900889 101913390 - MGP_BALBcJ_P0085370 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085371.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101900889 101913383 - MGP_BALBcJ_P0085371 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085372.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101900889 101910025 - MGP_BALBcJ_P0085372 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085373.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101901662 101912153 - MGP_BALBcJ_P0085373 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085374.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101901672 101913316 - MGP_BALBcJ_P0085374 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085375.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101901731 101913388 - MGP_BALBcJ_P0085375 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085376.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101901964 101911926 - MGP_BALBcJ_P0085376 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085377.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101906492 101913390 - MGP_BALBcJ_P0085377 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085378.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101906494 101911620 - MGP_BALBcJ_P0085378 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085379.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101906497 101913389 - MGP_BALBcJ_P0085379 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085380.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101906530 101911269 - MGP_BALBcJ_P0085380 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085381.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101906569 101911924 - MGP_BALBcJ_P0085381 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085382.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101906647 101913186 - MGP_BALBcJ_P0085382 Folr1 protein_coding protein_coding MGP_BALBcJ_T0085383.1 MGP_BALBcJ_G0032577.1 mouse_genomes_project 7 101911066 101912703 - Folr1 protein_coding processed_transcript MGP_BALBcJ_T0015695.1 MGP_BALBcJ_G0013792.1 mouse_genomes_project 7 11228662 11228876 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015859.1 MGP_BALBcJ_G0013956.1 mouse_genomes_project 7 104125047 104131043 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101339.1 MGP_BALBcJ_G0039375.1 mouse_genomes_project 7 88230831 88230964 + Gm25345 snoRNA snoRNA MGP_BALBcJ_T0083673.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44090085 44102227 - MGP_BALBcJ_P0083673 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0083674.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44090095 44106957 - MGP_BALBcJ_P0083674 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0083675.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44090107 44106731 - MGP_BALBcJ_P0083675 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0083676.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44090119 44106389 - MGP_BALBcJ_P0083676 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0083677.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44090613 44106646 - MGP_BALBcJ_P0083677 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0083678.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44093063 44106689 - MGP_BALBcJ_P0083678 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0083679.1 MGP_BALBcJ_G0032167.1 mouse_genomes_project 7 44093214 44109384 - MGP_BALBcJ_P0083679 Zfp473 protein_coding protein_coding MGP_BALBcJ_T0008787.1 MGP_BALBcJ_G0007094.1 mouse_genomes_project 7 16794143 16797581 - Gm26821 lincRNA lincRNA MGP_BALBcJ_T0018291.1 MGP_BALBcJ_G0015593.1 mouse_genomes_project 7 3749912 3760779 - Gm44015 processed_transcript lincRNA MGP_BALBcJ_T0018292.1 MGP_BALBcJ_G0015593.1 mouse_genomes_project 7 3749950 3756781 - Gm44015 processed_transcript retained_intron MGP_BALBcJ_T0005616.1 MGP_BALBcJ_G0004730.1 mouse_genomes_project 7 116888799 116889549 + AV356131 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0018297.1 MGP_BALBcJ_G0015596.1 mouse_genomes_project 7 25489905 25500171 + Gm44641 processed_transcript processed_transcript MGP_BALBcJ_T0015672.1 MGP_BALBcJ_G0013769.1 mouse_genomes_project 7 1351317 1351495 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086908.1 MGP_BALBcJ_G0033037.1 mouse_genomes_project 7 128270093 128293604 + MGP_BALBcJ_P0086908 Setd1a protein_coding protein_coding MGP_BALBcJ_T0086909.1 MGP_BALBcJ_G0033037.1 mouse_genomes_project 7 128270572 128277498 + MGP_BALBcJ_P0086909 Setd1a protein_coding protein_coding MGP_BALBcJ_T0086910.1 MGP_BALBcJ_G0033037.1 mouse_genomes_project 7 128270812 128277125 + MGP_BALBcJ_P0086910 Setd1a protein_coding protein_coding MGP_BALBcJ_T0086911.1 MGP_BALBcJ_G0033037.1 mouse_genomes_project 7 128270812 128293597 + MGP_BALBcJ_P0086911 Setd1a protein_coding protein_coding MGP_BALBcJ_T0086912.1 MGP_BALBcJ_G0033037.1 mouse_genomes_project 7 128271118 128271989 + MGP_BALBcJ_P0086912 Setd1a protein_coding protein_coding MGP_BALBcJ_T0086913.1 MGP_BALBcJ_G0033037.1 mouse_genomes_project 7 128272000 128275327 + Setd1a protein_coding processed_transcript MGP_BALBcJ_T0083641.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43885955 43903515 - MGP_BALBcJ_P0083641 Pold1 protein_coding protein_coding MGP_BALBcJ_T0083642.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43885958 43887128 - Pold1 protein_coding retained_intron MGP_BALBcJ_T0083643.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43885960 43903517 - Pold1 protein_coding retained_intron MGP_BALBcJ_T0083644.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43885963 43888301 - Pold1 protein_coding retained_intron MGP_BALBcJ_T0083645.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43885995 43903506 - MGP_BALBcJ_P0083645 Pold1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083646.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43886489 43887399 - Pold1 protein_coding retained_intron MGP_BALBcJ_T0083647.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43887105 43889168 - Pold1 protein_coding retained_intron MGP_BALBcJ_T0083648.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43890728 43891628 - Pold1 protein_coding retained_intron MGP_BALBcJ_T0083649.1 MGP_BALBcJ_G0032159.1 mouse_genomes_project 7 43895311 43903401 - MGP_BALBcJ_P0083649 Pold1 protein_coding protein_coding MGP_BALBcJ_T0082392.1 MGP_BALBcJ_G0031860.1 mouse_genomes_project 7 23801275 23819962 + MGP_BALBcJ_P0082392 Tgfb1 protein_coding protein_coding MGP_BALBcJ_T0082393.1 MGP_BALBcJ_G0031860.1 mouse_genomes_project 7 23802421 23802998 + Tgfb1 protein_coding processed_transcript MGP_BALBcJ_T0082394.1 MGP_BALBcJ_G0031860.1 mouse_genomes_project 7 23803163 23805736 + Tgfb1 protein_coding retained_intron MGP_BALBcJ_T0082395.1 MGP_BALBcJ_G0031860.1 mouse_genomes_project 7 23803200 23811446 + MGP_BALBcJ_P0082395 Tgfb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082396.1 MGP_BALBcJ_G0031860.1 mouse_genomes_project 7 23806703 23811407 + Tgfb1 protein_coding retained_intron MGP_BALBcJ_T0015668.1 MGP_BALBcJ_G0013765.1 mouse_genomes_project 7 971629 971909 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083115.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332806 29371351 - MGP_BALBcJ_P0083115 Usf2 protein_coding protein_coding MGP_BALBcJ_T0083116.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332812 29371379 - Usf2 protein_coding processed_transcript MGP_BALBcJ_T0083117.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332812 29371540 - MGP_BALBcJ_P0083117 Usf2 protein_coding protein_coding MGP_BALBcJ_T0083118.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332812 29371540 - MGP_BALBcJ_P0083118 Usf2 protein_coding protein_coding MGP_BALBcJ_T0083119.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332812 29371540 - MGP_BALBcJ_P0083119 Usf2 protein_coding protein_coding MGP_BALBcJ_T0083120.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332812 29370552 - MGP_BALBcJ_P0083120 Usf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083121.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29332983 29370562 - Usf2 protein_coding retained_intron MGP_BALBcJ_T0083122.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29333073 29371018 - MGP_BALBcJ_P0083122 Usf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083124.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29359338 29372353 - MGP_BALBcJ_P0083124 Usf2 protein_coding protein_coding MGP_BALBcJ_T0083125.1 MGP_BALBcJ_G0032036.1 mouse_genomes_project 7 29371038 29371760 - Usf2 protein_coding processed_transcript MGP_BALBcJ_T0085624.1 MGP_BALBcJ_G0032711.1 mouse_genomes_project 7 104712587 104713551 + MGP_BALBcJ_P0085624 Olfr661 protein_coding protein_coding MGP_BALBcJ_T0084338.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65632662 65647978 + Snrpa1 protein_coding processed_transcript MGP_BALBcJ_T0084339.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65633958 65643174 + Snrpa1 protein_coding processed_transcript MGP_BALBcJ_T0084340.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65633997 65648222 + MGP_BALBcJ_P0084340 Snrpa1 protein_coding protein_coding MGP_BALBcJ_T0084341.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65634191 65648011 + Snrpa1 protein_coding processed_transcript MGP_BALBcJ_T0084342.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65634203 65648215 + MGP_BALBcJ_P0084342 Snrpa1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084343.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65634223 65645260 + Snrpa1 protein_coding retained_intron MGP_BALBcJ_T0084344.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65634262 65648005 + Snrpa1 protein_coding processed_transcript MGP_BALBcJ_T0084345.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65634440 65635826 + Snrpa1 protein_coding processed_transcript MGP_BALBcJ_T0084346.1 MGP_BALBcJ_G0032338.1 mouse_genomes_project 7 65642499 65643171 + Snrpa1 protein_coding retained_intron MGP_BALBcJ_T0081742.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13658417 13677931 + MGP_BALBcJ_P0081742 Napa protein_coding protein_coding MGP_BALBcJ_T0081743.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13658567 13673492 + Napa protein_coding processed_transcript MGP_BALBcJ_T0081744.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13658591 13673091 + Napa protein_coding retained_intron MGP_BALBcJ_T0081745.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13658597 13669264 + Napa protein_coding processed_transcript MGP_BALBcJ_T0081746.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13669005 13674182 + Napa protein_coding retained_intron MGP_BALBcJ_T0081747.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13673600 13676515 + Napa protein_coding retained_intron MGP_BALBcJ_T0081748.1 MGP_BALBcJ_G0031677.1 mouse_genomes_project 7 13675059 13676695 + Napa protein_coding processed_transcript MGP_BALBcJ_T0085491.1 MGP_BALBcJ_G0032613.1 mouse_genomes_project 7 102786233 102787145 - MGP_BALBcJ_P0085491 Olfr559 protein_coding protein_coding MGP_BALBcJ_T0102725.1 MGP_BALBcJ_G0040540.1 mouse_genomes_project 7 32163240 32164513 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002216.1 MGP_BALBcJ_G0002128.1 mouse_genomes_project 7 42689775 42690252 + TEC TEC MGP_BALBcJ_T0085231.1 MGP_BALBcJ_G0032551.1 mouse_genomes_project 7 100241363 100276204 + MGP_BALBcJ_P0085231 P4ha3 protein_coding protein_coding MGP_BALBcJ_T0085232.1 MGP_BALBcJ_G0032551.1 mouse_genomes_project 7 100241363 100276204 + MGP_BALBcJ_P0085232 P4ha3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085233.1 MGP_BALBcJ_G0032551.1 mouse_genomes_project 7 100241385 100254438 + P4ha3 protein_coding retained_intron MGP_BALBcJ_T0085234.1 MGP_BALBcJ_G0032551.1 mouse_genomes_project 7 100249630 100276203 + MGP_BALBcJ_P0085234 P4ha3 protein_coding protein_coding MGP_BALBcJ_T0084558.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79096315 79106211 + MGP_BALBcJ_P0084558 Fanci protein_coding protein_coding MGP_BALBcJ_T0084559.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79096702 79113907 + MGP_BALBcJ_P0084559 Fanci protein_coding protein_coding MGP_BALBcJ_T0084560.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79096706 79154860 + MGP_BALBcJ_P0084560 Fanci protein_coding protein_coding MGP_BALBcJ_T0084561.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79096747 79154860 + MGP_BALBcJ_P0084561 Fanci protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084562.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79103462 79139988 + MGP_BALBcJ_P0084562 Fanci protein_coding protein_coding MGP_BALBcJ_T0084563.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79117050 79131533 + MGP_BALBcJ_P0084563 Fanci protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084564.1 MGP_BALBcJ_G0032379.1 mouse_genomes_project 7 79144987 79150322 + MGP_BALBcJ_P0084564 Fanci protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100083.1 MGP_BALBcJ_G0038119.1 mouse_genomes_project 7 98429187 98429351 + Gm23040 snRNA snRNA MGP_BALBcJ_T0086147.1 MGP_BALBcJ_G0032890.1 mouse_genomes_project 7 119148960 119166630 - MGP_BALBcJ_P0086147 Gde1 protein_coding protein_coding MGP_BALBcJ_T0086148.1 MGP_BALBcJ_G0032890.1 mouse_genomes_project 7 119148965 119159161 - MGP_BALBcJ_P0086148 Gde1 protein_coding protein_coding MGP_BALBcJ_T0100061.1 MGP_BALBcJ_G0038097.1 mouse_genomes_project 7 39842940 39843021 + Gm25784 snRNA snRNA MGP_BALBcJ_T0082722.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27132212 27137573 + Ech1 protein_coding retained_intron MGP_BALBcJ_T0082723.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27132212 27139678 + MGP_BALBcJ_P0082723 Ech1 protein_coding protein_coding MGP_BALBcJ_T0082724.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27132344 27133652 + Ech1 protein_coding retained_intron MGP_BALBcJ_T0082725.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27132953 27138664 + Ech1 protein_coding processed_transcript MGP_BALBcJ_T0082726.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27133199 27139678 + MGP_BALBcJ_P0082726 Ech1 protein_coding protein_coding MGP_BALBcJ_T0082727.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27137581 27139678 + Ech1 protein_coding retained_intron MGP_BALBcJ_T0082728.1 MGP_BALBcJ_G0031948.1 mouse_genomes_project 7 27138681 27139678 + Ech1 protein_coding retained_intron MGP_BALBcJ_T0008814.1 MGP_BALBcJ_G0007118.1 mouse_genomes_project 7 33402485 33412818 - Gm12756 lincRNA lincRNA MGP_BALBcJ_T0085803.1 MGP_BALBcJ_G0032793.1 mouse_genomes_project 7 108302461 108305811 + MGP_BALBcJ_P0085803 Olfr477 protein_coding protein_coding MGP_BALBcJ_T0015804.1 MGP_BALBcJ_G0013901.1 mouse_genomes_project 7 68823755 68824758 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082105.1 MGP_BALBcJ_G0031779.1 mouse_genomes_project 7 17713035 17719391 + MGP_BALBcJ_P0082105 Gm19345 protein_coding protein_coding MGP_BALBcJ_T0085522.1 MGP_BALBcJ_G0032641.1 mouse_genomes_project 7 103489181 103490126 - MGP_BALBcJ_P0085522 protein_coding protein_coding MGP_BALBcJ_T0102671.1 MGP_BALBcJ_G0040486.1 mouse_genomes_project 7 7379869 7395778 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082445.1 MGP_BALBcJ_G0031874.1 mouse_genomes_project 7 24831710 24853977 - MGP_BALBcJ_P0082445 Cyp2b23 protein_coding protein_coding MGP_BALBcJ_T0005274.1 MGP_BALBcJ_G0004476.1 mouse_genomes_project 7 128507743 128511007 - Gm15533 antisense antisense MGP_BALBcJ_T0005275.1 MGP_BALBcJ_G0004476.1 mouse_genomes_project 7 128508695 128511037 - Gm15533 antisense antisense MGP_BALBcJ_T0011670.1 MGP_BALBcJ_G0009795.1 mouse_genomes_project 7 90952204 90952414 - Gm27470 misc_RNA misc_RNA MGP_BALBcJ_T0081371.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490242 1501482 - MGP_BALBcJ_P0081371 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081372.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490242 1501511 - MGP_BALBcJ_P0081372 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081373.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490335 1501466 - MGP_BALBcJ_P0081373 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081374.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490335 1501482 - MGP_BALBcJ_P0081374 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081375.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490427 1499876 - MGP_BALBcJ_P0081375 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081376.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490456 1495439 - Tnnt1 protein_coding retained_intron MGP_BALBcJ_T0081377.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1490458 1493470 - Tnnt1 protein_coding processed_transcript MGP_BALBcJ_T0081378.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1493014 1501468 - MGP_BALBcJ_P0081378 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081379.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1493046 1495299 - Tnnt1 protein_coding retained_intron MGP_BALBcJ_T0081380.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1494010 1500123 - MGP_BALBcJ_P0081380 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081381.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1494078 1500082 - MGP_BALBcJ_P0081381 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081382.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1495110 1501889 - MGP_BALBcJ_P0081382 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0081383.1 MGP_BALBcJ_G0031529.1 mouse_genomes_project 7 1499344 1500615 - MGP_BALBcJ_P0081383 Tnnt1 protein_coding protein_coding MGP_BALBcJ_T0083541.1 MGP_BALBcJ_G0032136.1 mouse_genomes_project 7 43089327 43092640 + MGP_BALBcJ_P0083541 Klk5 protein_coding protein_coding MGP_BALBcJ_T0083542.1 MGP_BALBcJ_G0032136.1 mouse_genomes_project 7 43089625 43098484 + MGP_BALBcJ_P0083542 Klk5 protein_coding protein_coding MGP_BALBcJ_T0101340.1 MGP_BALBcJ_G0039376.1 mouse_genomes_project 7 92984305 92984431 - Gm25860 snoRNA snoRNA MGP_BALBcJ_T0086622.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127273121 127279755 - MGP_BALBcJ_P0086622 Ppp4c protein_coding protein_coding MGP_BALBcJ_T0086623.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127273123 127279599 - MGP_BALBcJ_P0086623 Ppp4c protein_coding protein_coding MGP_BALBcJ_T0086624.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127273416 127275668 - MGP_BALBcJ_P0086624 Ppp4c protein_coding protein_coding MGP_BALBcJ_T0086625.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127273486 127274597 - MGP_BALBcJ_P0086625 Ppp4c protein_coding protein_coding MGP_BALBcJ_T0086626.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127273546 127279752 - MGP_BALBcJ_P0086626 Ppp4c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086627.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127274477 127276302 - MGP_BALBcJ_P0086627 Ppp4c protein_coding protein_coding MGP_BALBcJ_T0086628.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127274725 127279406 - MGP_BALBcJ_P0086628 Ppp4c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086629.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127274828 127276275 - Ppp4c protein_coding retained_intron MGP_BALBcJ_T0086630.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127274921 127279725 - Ppp4c protein_coding retained_intron MGP_BALBcJ_T0086631.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127277770 127279755 - Ppp4c protein_coding retained_intron MGP_BALBcJ_T0086632.1 MGP_BALBcJ_G0032987.1 mouse_genomes_project 7 127277794 127279741 - Ppp4c protein_coding retained_intron MGP_BALBcJ_T0087806.1 MGP_BALBcJ_G0033244.1 mouse_genomes_project 7 143297556 143305486 + Mrpl23 protein_coding processed_transcript MGP_BALBcJ_T0087807.1 MGP_BALBcJ_G0033244.1 mouse_genomes_project 7 143297769 143305496 + MGP_BALBcJ_P0087807 Mrpl23 protein_coding protein_coding MGP_BALBcJ_T0087808.1 MGP_BALBcJ_G0033244.1 mouse_genomes_project 7 143299276 143302038 + Mrpl23 protein_coding retained_intron MGP_BALBcJ_T0087809.1 MGP_BALBcJ_G0033244.1 mouse_genomes_project 7 143300857 143302659 + Mrpl23 protein_coding retained_intron MGP_BALBcJ_T0005193.1 MGP_BALBcJ_G0004419.1 mouse_genomes_project 7 45977004 45993536 + Gm15700 antisense antisense MGP_BALBcJ_T0102686.1 MGP_BALBcJ_G0040501.1 mouse_genomes_project 7 9326487 9326686 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082131.1 MGP_BALBcJ_G0031799.1 mouse_genomes_project 7 22051189 22084056 + MGP_BALBcJ_P0082131 Zfp180 protein_coding protein_coding MGP_BALBcJ_T0082132.1 MGP_BALBcJ_G0031799.1 mouse_genomes_project 7 22051260 22084063 + MGP_BALBcJ_P0082132 Zfp180 protein_coding protein_coding MGP_BALBcJ_T0082133.1 MGP_BALBcJ_G0031799.1 mouse_genomes_project 7 22051260 22084048 + MGP_BALBcJ_P0082133 Zfp180 protein_coding protein_coding MGP_BALBcJ_T0082134.1 MGP_BALBcJ_G0031799.1 mouse_genomes_project 7 22051283 22080912 + MGP_BALBcJ_P0082134 Zfp180 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082135.1 MGP_BALBcJ_G0031799.1 mouse_genomes_project 7 22073503 22077775 + Zfp180 protein_coding retained_intron MGP_BALBcJ_T0015796.1 MGP_BALBcJ_G0013893.1 mouse_genomes_project 7 62039712 62040024 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018370.1 MGP_BALBcJ_G0015625.1 mouse_genomes_project 7 116506390 116518098 - 1700003G18Rik processed_transcript sense_overlapping MGP_BALBcJ_T0018371.1 MGP_BALBcJ_G0015625.1 mouse_genomes_project 7 116506529 116518045 - 1700003G18Rik processed_transcript sense_overlapping MGP_BALBcJ_T0018372.1 MGP_BALBcJ_G0015625.1 mouse_genomes_project 7 116516833 116518037 - 1700003G18Rik processed_transcript retained_intron MGP_BALBcJ_T0082644.1 MGP_BALBcJ_G0031927.1 mouse_genomes_project 7 26658879 26661350 - MGP_BALBcJ_P0082644 Zfp36 protein_coding protein_coding MGP_BALBcJ_T0102731.1 MGP_BALBcJ_G0040546.1 mouse_genomes_project 7 32473682 32474959 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082525.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25595185 25635525 - MGP_BALBcJ_P0082525 Sptbn4 protein_coding protein_coding MGP_BALBcJ_T0082526.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25595185 25637548 - MGP_BALBcJ_P0082526 Sptbn4 protein_coding protein_coding MGP_BALBcJ_T0082527.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25595185 25637193 - MGP_BALBcJ_P0082527 Sptbn4 protein_coding protein_coding MGP_BALBcJ_T0082528.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25595185 25687100 - MGP_BALBcJ_P0082528 Sptbn4 protein_coding protein_coding MGP_BALBcJ_T0082529.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25595189 25688187 - MGP_BALBcJ_P0082529 Sptbn4 protein_coding protein_coding MGP_BALBcJ_T0082530.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25675266 25688187 - MGP_BALBcJ_P0082530 Sptbn4 protein_coding protein_coding MGP_BALBcJ_T0082531.1 MGP_BALBcJ_G0031894.1 mouse_genomes_project 7 25686454 25687018 - Sptbn4 protein_coding processed_transcript MGP_BALBcJ_T0015692.1 MGP_BALBcJ_G0013789.1 mouse_genomes_project 7 11003307 11006740 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011684.1 MGP_BALBcJ_G0009809.1 mouse_genomes_project 7 144038816 144038935 + Gm27803 misc_RNA misc_RNA MGP_BALBcJ_T0081672.1 MGP_BALBcJ_G0031647.1 mouse_genomes_project 7 10532263 10533214 + MGP_BALBcJ_P0081672 Vmn1r88 protein_coding protein_coding MGP_BALBcJ_T0010846.1 MGP_BALBcJ_G0008971.1 mouse_genomes_project 7 44213015 44213088 + miRNA miRNA MGP_BALBcJ_T0085524.1 MGP_BALBcJ_G0032643.1 mouse_genomes_project 7 103558130 103563145 + MGP_BALBcJ_P0085524 protein_coding protein_coding MGP_BALBcJ_T0102674.1 MGP_BALBcJ_G0040489.1 mouse_genomes_project 7 7578271 7616105 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085469.1 MGP_BALBcJ_G0032593.1 mouse_genomes_project 7 102297438 102308424 - MGP_BALBcJ_P0085469 Rhog protein_coding protein_coding MGP_BALBcJ_T0085470.1 MGP_BALBcJ_G0032593.1 mouse_genomes_project 7 102297438 102308389 - MGP_BALBcJ_P0085470 Rhog protein_coding protein_coding MGP_BALBcJ_T0098730.1 MGP_BALBcJ_G0036784.1 mouse_genomes_project 7 3829825 3829919 + Gm27675 sRNA sRNA MGP_BALBcJ_T0082228.1 MGP_BALBcJ_G0031825.1 mouse_genomes_project 7 22729423 22735080 + MGP_BALBcJ_P0082228 BC049730 protein_coding protein_coding MGP_BALBcJ_T0082646.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26675011 26681108 + MGP_BALBcJ_P0082646 Paf1 protein_coding protein_coding MGP_BALBcJ_T0082647.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26675022 26676112 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082648.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26675101 26681103 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082649.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26675221 26677842 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082650.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26675518 26677760 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082651.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26676827 26677864 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082652.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26677489 26678144 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082653.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26677889 26680463 + Paf1 protein_coding retained_intron MGP_BALBcJ_T0082654.1 MGP_BALBcJ_G0031929.1 mouse_genomes_project 7 26680153 26680780 + Paf1 protein_coding processed_transcript MGP_BALBcJ_T0082670.1 MGP_BALBcJ_G0031937.1 mouse_genomes_project 7 26832842 26836551 - MGP_BALBcJ_P0082670 Nccrp1 protein_coding protein_coding MGP_BALBcJ_T0102768.1 MGP_BALBcJ_G0040583.1 mouse_genomes_project 7 47757022 47759131 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002310.1 MGP_BALBcJ_G0002221.1 mouse_genomes_project 7 128498917 128502236 + TEC TEC MGP_BALBcJ_T0102811.1 MGP_BALBcJ_G0040626.1 mouse_genomes_project 7 103602433 103603400 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100068.1 MGP_BALBcJ_G0038104.1 mouse_genomes_project 7 55267070 55267132 + Gm26482 snRNA snRNA MGP_BALBcJ_T0082370.1 MGP_BALBcJ_G0031855.1 mouse_genomes_project 7 23739035 23740807 + MGP_BALBcJ_P0082370 B3gnt8 protein_coding protein_coding MGP_BALBcJ_T0082371.1 MGP_BALBcJ_G0031855.1 mouse_genomes_project 7 23740018 23747482 + MGP_BALBcJ_P0082371 B3gnt8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082372.1 MGP_BALBcJ_G0031855.1 mouse_genomes_project 7 23740019 23741874 + MGP_BALBcJ_P0082372 B3gnt8 protein_coding protein_coding MGP_BALBcJ_T0082373.1 MGP_BALBcJ_G0031855.1 mouse_genomes_project 7 23740023 23741867 + B3gnt8 protein_coding retained_intron MGP_BALBcJ_T0085516.1 MGP_BALBcJ_G0032635.1 mouse_genomes_project 7 103312554 103313538 + MGP_BALBcJ_P0085516 Olfr593 protein_coding protein_coding MGP_BALBcJ_T0085832.1 MGP_BALBcJ_G0032822.1 mouse_genomes_project 7 109222884 109223829 - MGP_BALBcJ_P0085832 Olfr519 protein_coding protein_coding MGP_BALBcJ_T0085833.1 MGP_BALBcJ_G0032822.1 mouse_genomes_project 7 109222884 109223844 - MGP_BALBcJ_P0085833 Olfr519 protein_coding protein_coding MGP_BALBcJ_T0086290.1 MGP_BALBcJ_G0032929.1 mouse_genomes_project 7 121556714 121639222 + MGP_BALBcJ_P0086290 Otoa protein_coding protein_coding MGP_BALBcJ_T0086291.1 MGP_BALBcJ_G0032929.1 mouse_genomes_project 7 121556800 121576375 + MGP_BALBcJ_P0086291 Otoa protein_coding protein_coding MGP_BALBcJ_T0086292.1 MGP_BALBcJ_G0032929.1 mouse_genomes_project 7 121556816 121564970 + MGP_BALBcJ_P0086292 Otoa protein_coding protein_coding MGP_BALBcJ_T0086293.1 MGP_BALBcJ_G0032929.1 mouse_genomes_project 7 121556816 121564988 + MGP_BALBcJ_P0086293 Otoa protein_coding protein_coding MGP_BALBcJ_T0086294.1 MGP_BALBcJ_G0032929.1 mouse_genomes_project 7 121592671 121636977 + Otoa protein_coding retained_intron MGP_BALBcJ_T0086295.1 MGP_BALBcJ_G0032929.1 mouse_genomes_project 7 121592676 121639216 + Otoa protein_coding processed_transcript MGP_BALBcJ_T0083039.1 MGP_BALBcJ_G0032017.1 mouse_genomes_project 7 28997371 29007643 - MGP_BALBcJ_P0083039 Upk1a protein_coding protein_coding MGP_BALBcJ_T0005613.1 MGP_BALBcJ_G0004728.1 mouse_genomes_project 7 78978955 78980079 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0005614.1 MGP_BALBcJ_G0004728.1 mouse_genomes_project 7 78978959 78980303 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_BALBcJ_T0087358.1 MGP_BALBcJ_G0033132.1 mouse_genomes_project 7 139926244 139945001 + MGP_BALBcJ_P0087358 Pwwp2b protein_coding protein_coding MGP_BALBcJ_T0087359.1 MGP_BALBcJ_G0033132.1 mouse_genomes_project 7 139926244 139945001 + MGP_BALBcJ_P0087359 Pwwp2b protein_coding protein_coding MGP_BALBcJ_T0005236.1 MGP_BALBcJ_G0004450.1 mouse_genomes_project 7 97507337 97554269 - Rsf1os1 antisense antisense MGP_BALBcJ_T0086238.1 MGP_BALBcJ_G0032912.1 mouse_genomes_project 7 120597500 120612989 - MGP_BALBcJ_P0086238 Zp2 protein_coding protein_coding MGP_BALBcJ_T0086400.1 MGP_BALBcJ_G0032950.1 mouse_genomes_project 7 123872617 123905091 + MGP_BALBcJ_P0086400 Lcmt1 protein_coding protein_coding MGP_BALBcJ_T0086401.1 MGP_BALBcJ_G0032950.1 mouse_genomes_project 7 123881386 123933493 + MGP_BALBcJ_P0086401 Lcmt1 protein_coding protein_coding MGP_BALBcJ_T0086402.1 MGP_BALBcJ_G0032950.1 mouse_genomes_project 7 123881460 123933484 + MGP_BALBcJ_P0086402 Lcmt1 protein_coding protein_coding MGP_BALBcJ_T0086403.1 MGP_BALBcJ_G0032950.1 mouse_genomes_project 7 123911793 123925887 + Lcmt1 protein_coding processed_transcript MGP_BALBcJ_T0086404.1 MGP_BALBcJ_G0032950.1 mouse_genomes_project 7 123921273 123933479 + Lcmt1 protein_coding retained_intron MGP_BALBcJ_T0086405.1 MGP_BALBcJ_G0032950.1 mouse_genomes_project 7 123930990 123933483 + Lcmt1 protein_coding retained_intron MGP_BALBcJ_T0086651.1 MGP_BALBcJ_G0032990.1 mouse_genomes_project 7 127319317 127320346 - MGP_BALBcJ_P0086651 4930451I11Rik protein_coding protein_coding MGP_BALBcJ_T0086652.1 MGP_BALBcJ_G0032990.1 mouse_genomes_project 7 127319318 127320489 - 4930451I11Rik protein_coding processed_transcript MGP_BALBcJ_T0086653.1 MGP_BALBcJ_G0032990.1 mouse_genomes_project 7 127319326 127320322 - MGP_BALBcJ_P0086653 4930451I11Rik protein_coding protein_coding MGP_BALBcJ_T0102807.1 MGP_BALBcJ_G0040622.1 mouse_genomes_project 7 103246237 103247185 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082175.1 MGP_BALBcJ_G0031810.1 mouse_genomes_project 7 22355854 22361825 + MGP_BALBcJ_P0082175 Lypd5 protein_coding protein_coding MGP_BALBcJ_T0086645.1 MGP_BALBcJ_G0032989.1 mouse_genomes_project 7 127285346 127319065 + MGP_BALBcJ_P0086645 Fam57b protein_coding protein_coding MGP_BALBcJ_T0086646.1 MGP_BALBcJ_G0032989.1 mouse_genomes_project 7 127300863 127309991 + Fam57b protein_coding processed_transcript MGP_BALBcJ_T0086647.1 MGP_BALBcJ_G0032989.1 mouse_genomes_project 7 127302216 127305390 + Fam57b protein_coding processed_transcript MGP_BALBcJ_T0086648.1 MGP_BALBcJ_G0032989.1 mouse_genomes_project 7 127305044 127316386 + MGP_BALBcJ_P0086648 Fam57b protein_coding protein_coding MGP_BALBcJ_T0086649.1 MGP_BALBcJ_G0032989.1 mouse_genomes_project 7 127305045 127319069 + MGP_BALBcJ_P0086649 Fam57b protein_coding protein_coding MGP_BALBcJ_T0086650.1 MGP_BALBcJ_G0032989.1 mouse_genomes_project 7 127312941 127319067 + MGP_BALBcJ_P0086650 Fam57b protein_coding protein_coding MGP_BALBcJ_T0010830.1 MGP_BALBcJ_G0008955.1 mouse_genomes_project 7 23944501 23944597 - Gm24865 miRNA miRNA MGP_BALBcJ_T0081486.1 MGP_BALBcJ_G0031559.1 mouse_genomes_project 7 2028599 2032353 + MGP_BALBcJ_P0081486 protein_coding protein_coding MGP_BALBcJ_T0085107.1 MGP_BALBcJ_G0032517.1 mouse_genomes_project 7 97836687 97971629 + MGP_BALBcJ_P0085107 Gdpd4 protein_coding protein_coding MGP_BALBcJ_T0085108.1 MGP_BALBcJ_G0032517.1 mouse_genomes_project 7 97884667 97970731 + MGP_BALBcJ_P0085108 Gdpd4 protein_coding protein_coding MGP_BALBcJ_T0015757.1 MGP_BALBcJ_G0013854.1 mouse_genomes_project 7 38533572 38534166 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102830.1 MGP_BALBcJ_G0040645.1 mouse_genomes_project 7 105960638 105961904 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100063.1 MGP_BALBcJ_G0038099.1 mouse_genomes_project 7 45274277 45274362 - Gm22098 snRNA snRNA MGP_BALBcJ_T0085480.1 MGP_BALBcJ_G0032602.1 mouse_genomes_project 7 102636461 102637499 + MGP_BALBcJ_P0085480 Olfr550 protein_coding protein_coding MGP_BALBcJ_T0015671.1 MGP_BALBcJ_G0013768.1 mouse_genomes_project 7 1301602 1301967 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085523.1 MGP_BALBcJ_G0032642.1 mouse_genomes_project 7 103558130 103564281 + MGP_BALBcJ_P0085523 protein_coding protein_coding MGP_BALBcJ_T0081878.1 MGP_BALBcJ_G0031709.1 mouse_genomes_project 7 14760463 14776402 + MGP_BALBcJ_P0081878 Ceacam3 protein_coding protein_coding MGP_BALBcJ_T0010860.1 MGP_BALBcJ_G0008985.1 mouse_genomes_project 7 61176559 61176639 - Mir344d-2 miRNA miRNA MGP_BALBcJ_T0085856.1 MGP_BALBcJ_G0032830.1 mouse_genomes_project 7 109857901 109861119 + MGP_BALBcJ_P0085856 Rpl27a protein_coding protein_coding MGP_BALBcJ_T0085857.1 MGP_BALBcJ_G0032830.1 mouse_genomes_project 7 109857950 109859905 + Rpl27a protein_coding retained_intron MGP_BALBcJ_T0085858.1 MGP_BALBcJ_G0032830.1 mouse_genomes_project 7 109857953 109858934 + Rpl27a protein_coding retained_intron MGP_BALBcJ_T0085859.1 MGP_BALBcJ_G0032830.1 mouse_genomes_project 7 109857967 109860518 + Rpl27a protein_coding retained_intron MGP_BALBcJ_T0085860.1 MGP_BALBcJ_G0032830.1 mouse_genomes_project 7 109857974 109859352 + MGP_BALBcJ_P0085860 Rpl27a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085861.1 MGP_BALBcJ_G0032830.1 mouse_genomes_project 7 109858024 109858693 + Rpl27a protein_coding retained_intron MGP_BALBcJ_T0087168.1 MGP_BALBcJ_G0033084.1 mouse_genomes_project 7 131938406 131940898 + MGP_BALBcJ_P0087168 Fam24a protein_coding protein_coding MGP_BALBcJ_T0008936.1 MGP_BALBcJ_G0007204.1 mouse_genomes_project 7 82609370 82617908 + 1700010L04Rik lincRNA lincRNA MGP_BALBcJ_T0008937.1 MGP_BALBcJ_G0007204.1 mouse_genomes_project 7 82614314 82617907 + 1700010L04Rik lincRNA lincRNA MGP_BALBcJ_T0008938.1 MGP_BALBcJ_G0007204.1 mouse_genomes_project 7 82614324 82617463 + 1700010L04Rik lincRNA lincRNA MGP_BALBcJ_T0081336.1 MGP_BALBcJ_G0031524.1 mouse_genomes_project 7 1328421 1336607 + MGP_BALBcJ_P0081336 Ncr1 protein_coding protein_coding MGP_BALBcJ_T0081337.1 MGP_BALBcJ_G0031524.1 mouse_genomes_project 7 1328466 1336607 + MGP_BALBcJ_P0081337 Ncr1 protein_coding protein_coding MGP_BALBcJ_T0085061.1 MGP_BALBcJ_G0032510.1 mouse_genomes_project 7 97358124 97367723 + MGP_BALBcJ_P0085061 Kctd14 protein_coding protein_coding MGP_BALBcJ_T0085062.1 MGP_BALBcJ_G0032510.1 mouse_genomes_project 7 97360005 97367722 + MGP_BALBcJ_P0085062 Kctd14 protein_coding protein_coding MGP_BALBcJ_T0085063.1 MGP_BALBcJ_G0032510.1 mouse_genomes_project 7 97360005 97367722 + MGP_BALBcJ_P0085063 Kctd14 protein_coding protein_coding MGP_BALBcJ_T0085064.1 MGP_BALBcJ_G0032510.1 mouse_genomes_project 7 97360005 97367719 + MGP_BALBcJ_P0085064 Kctd14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085065.1 MGP_BALBcJ_G0032510.1 mouse_genomes_project 7 97360005 97365211 + MGP_BALBcJ_P0085065 Kctd14 protein_coding protein_coding MGP_BALBcJ_T0085066.1 MGP_BALBcJ_G0032510.1 mouse_genomes_project 7 97360023 97367721 + MGP_BALBcJ_P0085066 Kctd14 protein_coding protein_coding MGP_BALBcJ_T0081778.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13834368 13852873 - MGP_BALBcJ_P0081778 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0081780.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13836415 13838145 - Ccdc9 protein_coding retained_intron MGP_BALBcJ_T0081781.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13836418 13852838 - MGP_BALBcJ_P0081781 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0081782.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13837837 13851107 - MGP_BALBcJ_P0081782 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0081783.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13837850 13846749 - Ccdc9 protein_coding retained_intron MGP_BALBcJ_T0081784.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13838243 13840758 - MGP_BALBcJ_P0081784 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0081785.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13838388 13839071 - Ccdc9 protein_coding retained_intron MGP_BALBcJ_T0081786.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13838967 13847218 - Ccdc9 protein_coding retained_intron MGP_BALBcJ_T0081787.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13846677 13847858 - Ccdc9 protein_coding processed_transcript MGP_BALBcJ_T0081788.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13848557 13852828 - MGP_BALBcJ_P0081788 Ccdc9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081789.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13848566 13851584 - MGP_BALBcJ_P0081789 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0081790.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13848617 13852822 - MGP_BALBcJ_P0081790 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0081791.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13848738 13852821 - Ccdc9 protein_coding retained_intron MGP_BALBcJ_T0081792.1 MGP_BALBcJ_G0031684.1 mouse_genomes_project 7 13848871 13852073 - MGP_BALBcJ_P0081792 Ccdc9 protein_coding protein_coding MGP_BALBcJ_T0083544.1 MGP_BALBcJ_G0032138.1 mouse_genomes_project 7 43186331 43192513 + MGP_BALBcJ_P0083544 Klk15 protein_coding protein_coding MGP_BALBcJ_T0083545.1 MGP_BALBcJ_G0032138.1 mouse_genomes_project 7 43186384 43191604 + MGP_BALBcJ_P0083545 Klk15 protein_coding protein_coding MGP_BALBcJ_T0086815.1 MGP_BALBcJ_G0033022.1 mouse_genomes_project 7 127937618 127944635 - MGP_BALBcJ_P0086815 Zfp689 protein_coding protein_coding MGP_BALBcJ_T0086816.1 MGP_BALBcJ_G0033022.1 mouse_genomes_project 7 127939231 127944470 - MGP_BALBcJ_P0086816 Zfp689 protein_coding protein_coding MGP_BALBcJ_T0102694.1 MGP_BALBcJ_G0040509.1 mouse_genomes_project 7 10589817 10590018 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101982.1 MGP_BALBcJ_G0039829.1 mouse_genomes_project 7 127167016 127169592 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0015754.1 MGP_BALBcJ_G0013851.1 mouse_genomes_project 7 33229470 33230115 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102756.1 MGP_BALBcJ_G0040571.1 mouse_genomes_project 7 46954500 46987813 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002218.1 MGP_BALBcJ_G0002130.1 mouse_genomes_project 7 42962012 42962446 + TEC TEC MGP_BALBcJ_T0005119.1 MGP_BALBcJ_G0004368.1 mouse_genomes_project 7 1436576 1456947 - Gm15494 antisense antisense MGP_BALBcJ_T0005120.1 MGP_BALBcJ_G0004368.1 mouse_genomes_project 7 1437406 1456983 - Gm15494 antisense antisense MGP_BALBcJ_T0015731.1 MGP_BALBcJ_G0013828.1 mouse_genomes_project 7 24070090 24070259 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082832.1 MGP_BALBcJ_G0031971.1 mouse_genomes_project 7 28150404 28161979 + MGP_BALBcJ_P0082832 Zfp30 protein_coding protein_coding MGP_BALBcJ_T0082833.1 MGP_BALBcJ_G0031971.1 mouse_genomes_project 7 28150429 28159191 + Zfp30 protein_coding retained_intron MGP_BALBcJ_T0082834.1 MGP_BALBcJ_G0031971.1 mouse_genomes_project 7 28150600 28161986 + MGP_BALBcJ_P0082834 Zfp30 protein_coding protein_coding MGP_BALBcJ_T0086381.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123716797 123767168 + MGP_BALBcJ_P0086381 Slc5a11 protein_coding protein_coding MGP_BALBcJ_T0086382.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123716828 123730723 + Slc5a11 protein_coding processed_transcript MGP_BALBcJ_T0086383.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123716830 123774459 + MGP_BALBcJ_P0086383 Slc5a11 protein_coding protein_coding MGP_BALBcJ_T0086384.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123730622 123741153 + MGP_BALBcJ_P0086384 Slc5a11 protein_coding protein_coding MGP_BALBcJ_T0086385.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123730622 123749736 + MGP_BALBcJ_P0086385 Slc5a11 protein_coding protein_coding MGP_BALBcJ_T0086386.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123737346 123774409 + MGP_BALBcJ_P0086386 Slc5a11 protein_coding protein_coding MGP_BALBcJ_T0086387.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123742049 123751585 + MGP_BALBcJ_P0086387 Slc5a11 protein_coding protein_coding MGP_BALBcJ_T0086388.1 MGP_BALBcJ_G0032948.1 mouse_genomes_project 7 123766676 123769289 + Slc5a11 protein_coding processed_transcript MGP_BALBcJ_T0081801.1 MGP_BALBcJ_G0031691.1 mouse_genomes_project 7 14077183 14200190 - MGP_BALBcJ_P0081801 Arhgap35 protein_coding protein_coding MGP_BALBcJ_T0081802.1 MGP_BALBcJ_G0031691.1 mouse_genomes_project 7 14079708 14200134 - MGP_BALBcJ_P0081802 Arhgap35 protein_coding protein_coding MGP_BALBcJ_T0081205.1 MGP_BALBcJ_G0031501.1 mouse_genomes_project 7 300608 326429 + MGP_BALBcJ_P0081205 Cacng8 protein_coding protein_coding MGP_BALBcJ_T0081206.1 MGP_BALBcJ_G0031501.1 mouse_genomes_project 7 304064 326429 + MGP_BALBcJ_P0081206 Cacng8 protein_coding protein_coding MGP_BALBcJ_T0081207.1 MGP_BALBcJ_G0031501.1 mouse_genomes_project 7 304365 304900 + MGP_BALBcJ_P0081207 Cacng8 protein_coding protein_coding MGP_BALBcJ_T0098640.1 MGP_BALBcJ_G0036694.1 mouse_genomes_project 7 14051728 14051847 + n-R5s151 rRNA rRNA MGP_BALBcJ_T0084925.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87125662 87185096 + MGP_BALBcJ_P0084925 Nox4 protein_coding protein_coding MGP_BALBcJ_T0084926.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126217 87188441 + Nox4 protein_coding retained_intron MGP_BALBcJ_T0084927.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126217 87167962 + Nox4 protein_coding processed_transcript MGP_BALBcJ_T0084928.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126217 87271426 + MGP_BALBcJ_P0084928 Nox4 protein_coding protein_coding MGP_BALBcJ_T0084929.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126217 87274273 + MGP_BALBcJ_P0084929 Nox4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084930.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126217 87267913 + MGP_BALBcJ_P0084930 Nox4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084931.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126217 87274273 + MGP_BALBcJ_P0084931 Nox4 protein_coding protein_coding MGP_BALBcJ_T0084932.1 MGP_BALBcJ_G0032474.1 mouse_genomes_project 7 87126380 87273903 + MGP_BALBcJ_P0084932 Nox4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102791.1 MGP_BALBcJ_G0040606.1 mouse_genomes_project 7 85416496 85418721 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085483.1 MGP_BALBcJ_G0032605.1 mouse_genomes_project 7 102671812 102672793 - MGP_BALBcJ_P0085483 Olfr553 protein_coding protein_coding MGP_BALBcJ_T0081920.1 MGP_BALBcJ_G0031729.1 mouse_genomes_project 7 16766411 16797727 + MGP_BALBcJ_P0081920 protein_coding protein_coding MGP_BALBcJ_T0081581.1 MGP_BALBcJ_G0031610.1 mouse_genomes_project 7 7928046 7987380 + MGP_BALBcJ_P0081581 Nlrp4b protein_coding protein_coding MGP_BALBcJ_T0081582.1 MGP_BALBcJ_G0031610.1 mouse_genomes_project 7 7928074 7987390 + MGP_BALBcJ_P0081582 Nlrp4b protein_coding protein_coding MGP_BALBcJ_T0081583.1 MGP_BALBcJ_G0031610.1 mouse_genomes_project 7 7958363 7970334 + MGP_BALBcJ_P0081583 Nlrp4b protein_coding protein_coding MGP_BALBcJ_T0015681.1 MGP_BALBcJ_G0013778.1 mouse_genomes_project 7 3033164 3034113 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010913.1 MGP_BALBcJ_G0009038.1 mouse_genomes_project 7 140683757 140683823 - Mir7062 miRNA miRNA MGP_BALBcJ_T0081635.1 MGP_BALBcJ_G0031637.1 mouse_genomes_project 7 10337682 10343242 + MGP_BALBcJ_P0081635 Zfp446 protein_coding protein_coding MGP_BALBcJ_T0081636.1 MGP_BALBcJ_G0031637.1 mouse_genomes_project 7 10337682 10343242 + MGP_BALBcJ_P0081636 Zfp446 protein_coding protein_coding MGP_BALBcJ_T0081637.1 MGP_BALBcJ_G0031637.1 mouse_genomes_project 7 10337682 10344155 + MGP_BALBcJ_P0081637 Zfp446 protein_coding protein_coding MGP_BALBcJ_T0081638.1 MGP_BALBcJ_G0031637.1 mouse_genomes_project 7 10337727 10341309 + Zfp446 protein_coding retained_intron MGP_BALBcJ_T0081639.1 MGP_BALBcJ_G0031637.1 mouse_genomes_project 7 10338077 10344161 + MGP_BALBcJ_P0081639 Zfp446 protein_coding protein_coding MGP_BALBcJ_T0081640.1 MGP_BALBcJ_G0031637.1 mouse_genomes_project 7 10339359 10344186 + Zfp446 protein_coding retained_intron MGP_BALBcJ_T0015890.1 MGP_BALBcJ_G0013987.1 mouse_genomes_project 7 127294139 127294443 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010857.1 MGP_BALBcJ_G0008982.1 mouse_genomes_project 7 61165056 61165135 - Gm25533 miRNA miRNA MGP_BALBcJ_T0015762.1 MGP_BALBcJ_G0013859.1 mouse_genomes_project 7 40331921 40333421 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102767.1 MGP_BALBcJ_G0040582.1 mouse_genomes_project 7 47690699 47691582 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010921.1 MGP_BALBcJ_G0009046.1 mouse_genomes_project 7 144717402 144717496 + Mir6404 miRNA miRNA MGP_BALBcJ_T0101364.1 MGP_BALBcJ_G0039400.1 mouse_genomes_project 7 135802385 135802518 - Gm24581 snoRNA snoRNA MGP_BALBcJ_T0008996.1 MGP_BALBcJ_G0007243.1 mouse_genomes_project 7 126694252 126719763 - Gm44875 lincRNA lincRNA MGP_BALBcJ_T0002203.1 MGP_BALBcJ_G0002115.1 mouse_genomes_project 7 35471944 35472866 + TEC TEC MGP_BALBcJ_T0102741.1 MGP_BALBcJ_G0040556.1 mouse_genomes_project 7 41593900 41598198 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087760.1 MGP_BALBcJ_G0033240.1 mouse_genomes_project 7 143206735 143209379 + MGP_BALBcJ_P0087760 Tnni2 protein_coding protein_coding MGP_BALBcJ_T0087761.1 MGP_BALBcJ_G0033240.1 mouse_genomes_project 7 143206743 143209005 + MGP_BALBcJ_P0087761 Tnni2 protein_coding protein_coding MGP_BALBcJ_T0087762.1 MGP_BALBcJ_G0033240.1 mouse_genomes_project 7 143207257 143209337 + MGP_BALBcJ_P0087762 Tnni2 protein_coding protein_coding MGP_BALBcJ_T0087763.1 MGP_BALBcJ_G0033240.1 mouse_genomes_project 7 143207835 143209377 + Tnni2 protein_coding retained_intron MGP_BALBcJ_T0087764.1 MGP_BALBcJ_G0033240.1 mouse_genomes_project 7 143207907 143208828 + Tnni2 protein_coding retained_intron MGP_BALBcJ_T0087765.1 MGP_BALBcJ_G0033240.1 mouse_genomes_project 7 143208098 143209374 + MGP_BALBcJ_P0087765 Tnni2 protein_coding protein_coding MGP_BALBcJ_T0087378.1 MGP_BALBcJ_G0033136.1 mouse_genomes_project 7 140527609 140572891 + MGP_BALBcJ_P0087378 Adgra1 protein_coding protein_coding MGP_BALBcJ_T0087379.1 MGP_BALBcJ_G0033136.1 mouse_genomes_project 7 140527800 140539185 + Adgra1 protein_coding processed_transcript MGP_BALBcJ_T0087380.1 MGP_BALBcJ_G0033136.1 mouse_genomes_project 7 140528397 140534627 + Adgra1 protein_coding retained_intron MGP_BALBcJ_T0085802.1 MGP_BALBcJ_G0032792.1 mouse_genomes_project 7 108277199 108278132 + MGP_BALBcJ_P0085802 Olfr476 protein_coding protein_coding MGP_BALBcJ_T0084609.1 MGP_BALBcJ_G0032388.1 mouse_genomes_project 7 79522241 79524954 + MGP_BALBcJ_P0084609 Mesp2 protein_coding protein_coding MGP_BALBcJ_T0083981.1 MGP_BALBcJ_G0032247.1 mouse_genomes_project 7 45323048 45330304 + MGP_BALBcJ_P0083981 Ccdc114 protein_coding protein_coding MGP_BALBcJ_T0083982.1 MGP_BALBcJ_G0032247.1 mouse_genomes_project 7 45323192 45324044 + Ccdc114 protein_coding retained_intron MGP_BALBcJ_T0083983.1 MGP_BALBcJ_G0032247.1 mouse_genomes_project 7 45323219 45330310 + MGP_BALBcJ_P0083983 Ccdc114 protein_coding protein_coding MGP_BALBcJ_T0083984.1 MGP_BALBcJ_G0032247.1 mouse_genomes_project 7 45323219 45335173 + MGP_BALBcJ_P0083984 Ccdc114 protein_coding protein_coding MGP_BALBcJ_T0083985.1 MGP_BALBcJ_G0032247.1 mouse_genomes_project 7 45323496 45347393 + MGP_BALBcJ_P0083985 Ccdc114 protein_coding protein_coding MGP_BALBcJ_T0082588.1 MGP_BALBcJ_G0031907.1 mouse_genomes_project 7 26071200 26084088 + MGP_BALBcJ_P0082588 Zfp626 protein_coding protein_coding MGP_BALBcJ_T0082589.1 MGP_BALBcJ_G0031907.1 mouse_genomes_project 7 26071262 26079841 + MGP_BALBcJ_P0082589 Zfp626 protein_coding protein_coding MGP_BALBcJ_T0005175.1 MGP_BALBcJ_G0004407.1 mouse_genomes_project 7 33798733 33799086 + Gm45095 antisense antisense MGP_BALBcJ_T0085814.1 MGP_BALBcJ_G0032804.1 mouse_genomes_project 7 108612704 108613649 - MGP_BALBcJ_P0085814 protein_coding protein_coding MGP_BALBcJ_T0008890.1 MGP_BALBcJ_G0007177.1 mouse_genomes_project 7 72709278 72712472 + Gm44725 lincRNA lincRNA MGP_BALBcJ_T0082313.1 MGP_BALBcJ_G0031844.1 mouse_genomes_project 7 23296607 23306684 - MGP_BALBcJ_P0082313 Erf protein_coding protein_coding MGP_BALBcJ_T0082314.1 MGP_BALBcJ_G0031844.1 mouse_genomes_project 7 23301365 23306653 - MGP_BALBcJ_P0082314 Erf protein_coding protein_coding MGP_BALBcJ_T0101969.1 MGP_BALBcJ_G0039823.1 mouse_genomes_project 7 27932160 27955166 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101970.1 MGP_BALBcJ_G0039823.1 mouse_genomes_project 7 27934096 27948745 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0102810.1 MGP_BALBcJ_G0040625.1 mouse_genomes_project 7 103341391 103342318 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015786.1 MGP_BALBcJ_G0013883.1 mouse_genomes_project 7 55030141 55030687 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084086.1 MGP_BALBcJ_G0032281.1 mouse_genomes_project 7 48010872 48023069 - MGP_BALBcJ_P0084086 Mrgprb1 protein_coding protein_coding MGP_BALBcJ_T0084087.1 MGP_BALBcJ_G0032281.1 mouse_genomes_project 7 48013659 48023022 - MGP_BALBcJ_P0084087 Mrgprb1 protein_coding protein_coding MGP_BALBcJ_T0084088.1 MGP_BALBcJ_G0032281.1 mouse_genomes_project 7 48013889 48022973 - MGP_BALBcJ_P0084088 Mrgprb1 protein_coding protein_coding MGP_BALBcJ_T0083902.1 MGP_BALBcJ_G0032224.1 mouse_genomes_project 7 45005106 45008925 + MGP_BALBcJ_P0083902 Fut1 protein_coding protein_coding MGP_BALBcJ_T0084861.1 MGP_BALBcJ_G0032439.1 mouse_genomes_project 7 83350439 83383905 + Tmc3 protein_coding retained_intron MGP_BALBcJ_T0084862.1 MGP_BALBcJ_G0032439.1 mouse_genomes_project 7 83350443 83357530 + Tmc3 protein_coding retained_intron MGP_BALBcJ_T0084863.1 MGP_BALBcJ_G0032439.1 mouse_genomes_project 7 83350443 83391407 + MGP_BALBcJ_P0084863 Tmc3 protein_coding protein_coding MGP_BALBcJ_T0084864.1 MGP_BALBcJ_G0032439.1 mouse_genomes_project 7 83350604 83388745 + MGP_BALBcJ_P0084864 Tmc3 protein_coding protein_coding MGP_BALBcJ_T0084865.1 MGP_BALBcJ_G0032439.1 mouse_genomes_project 7 83363340 83364714 + Tmc3 protein_coding retained_intron MGP_BALBcJ_T0084914.1 MGP_BALBcJ_G0032464.1 mouse_genomes_project 7 86235800 86246446 + MGP_BALBcJ_P0084914 Olfr301 protein_coding protein_coding MGP_BALBcJ_T0002290.1 MGP_BALBcJ_G0002201.1 mouse_genomes_project 7 122660667 122661683 - TEC TEC MGP_BALBcJ_T0083556.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595119 43601325 + MGP_BALBcJ_P0083556 protein_coding protein_coding MGP_BALBcJ_T0083557.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595126 43602895 + MGP_BALBcJ_P0083557 protein_coding protein_coding MGP_BALBcJ_T0083558.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595145 43601160 + MGP_BALBcJ_P0083558 protein_coding protein_coding MGP_BALBcJ_T0083559.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595178 43597144 + protein_coding processed_transcript MGP_BALBcJ_T0083560.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595178 43601257 + MGP_BALBcJ_P0083560 protein_coding protein_coding MGP_BALBcJ_T0083561.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595178 43602890 + MGP_BALBcJ_P0083561 protein_coding protein_coding MGP_BALBcJ_T0083562.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595178 43602893 + MGP_BALBcJ_P0083562 protein_coding protein_coding MGP_BALBcJ_T0083563.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595180 43602890 + MGP_BALBcJ_P0083563 protein_coding protein_coding MGP_BALBcJ_T0083564.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595182 43602891 + MGP_BALBcJ_P0083564 protein_coding protein_coding MGP_BALBcJ_T0083565.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595188 43596558 + protein_coding processed_transcript MGP_BALBcJ_T0083566.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595190 43599339 + MGP_BALBcJ_P0083566 protein_coding protein_coding MGP_BALBcJ_T0083567.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595191 43598447 + protein_coding processed_transcript MGP_BALBcJ_T0083568.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595199 43598873 + protein_coding processed_transcript MGP_BALBcJ_T0083569.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595209 43598920 + protein_coding processed_transcript MGP_BALBcJ_T0083570.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595622 43599193 + MGP_BALBcJ_P0083570 protein_coding protein_coding MGP_BALBcJ_T0083571.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43595833 43602890 + MGP_BALBcJ_P0083571 protein_coding protein_coding MGP_BALBcJ_T0083572.1 MGP_BALBcJ_G0032146.1 mouse_genomes_project 7 43597985 43602893 + MGP_BALBcJ_P0083572 protein_coding protein_coding MGP_BALBcJ_T0015889.1 MGP_BALBcJ_G0013986.1 mouse_genomes_project 7 127232412 127232774 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002253.1 MGP_BALBcJ_G0002164.1 mouse_genomes_project 7 73424927 73425617 - TEC TEC MGP_BALBcJ_T0085659.1 MGP_BALBcJ_G0032738.1 mouse_genomes_project 7 105549232 105594505 + MGP_BALBcJ_P0085659 Cckbr protein_coding protein_coding MGP_BALBcJ_T0085660.1 MGP_BALBcJ_G0032738.1 mouse_genomes_project 7 105549235 105559765 + MGP_BALBcJ_P0085660 Cckbr protein_coding protein_coding MGP_BALBcJ_T0102688.1 MGP_BALBcJ_G0040503.1 mouse_genomes_project 7 9455878 9457156 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005269.1 MGP_BALBcJ_G0004471.1 mouse_genomes_project 7 127522105 127525929 + Gm31749 antisense antisense MGP_BALBcJ_T0002272.1 MGP_BALBcJ_G0002183.1 mouse_genomes_project 7 79221515 79223393 + TEC TEC MGP_BALBcJ_T0082620.1 MGP_BALBcJ_G0031922.1 mouse_genomes_project 7 26575339 26584005 - MGP_BALBcJ_P0082620 Dll3 protein_coding protein_coding MGP_BALBcJ_T0082621.1 MGP_BALBcJ_G0031922.1 mouse_genomes_project 7 26575385 26576268 - Dll3 protein_coding processed_transcript MGP_BALBcJ_T0082622.1 MGP_BALBcJ_G0031922.1 mouse_genomes_project 7 26580438 26583539 - Dll3 protein_coding retained_intron MGP_BALBcJ_T0083857.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44864379 44902293 + MGP_BALBcJ_P0083857 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083858.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44864380 44901746 + MGP_BALBcJ_P0083858 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083859.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44864481 44901748 + MGP_BALBcJ_P0083859 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083869.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44893073 44901960 + MGP_BALBcJ_P0083869 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083870.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44893091 44901753 + MGP_BALBcJ_P0083870 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083871.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44893948 44896055 + MGP_BALBcJ_P0083871 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083872.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44893969 44901748 + MGP_BALBcJ_P0083872 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083873.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44893973 44897314 + MGP_BALBcJ_P0083873 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083874.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44894004 44902998 + MGP_BALBcJ_P0083874 Tulp2 protein_coding protein_coding MGP_BALBcJ_T0083875.1 MGP_BALBcJ_G0032217.1 mouse_genomes_project 7 44895175 44895688 + Tulp2 protein_coding processed_transcript MGP_BALBcJ_T0082684.1 MGP_BALBcJ_G0031940.1 mouse_genomes_project 7 27020935 27044037 + MGP_BALBcJ_P0082684 Fbxo17 protein_coding protein_coding MGP_BALBcJ_T0082685.1 MGP_BALBcJ_G0031940.1 mouse_genomes_project 7 27020963 27044031 + MGP_BALBcJ_P0082685 Fbxo17 protein_coding protein_coding MGP_BALBcJ_T0082686.1 MGP_BALBcJ_G0031940.1 mouse_genomes_project 7 27020987 27030848 + Fbxo17 protein_coding retained_intron MGP_BALBcJ_T0082687.1 MGP_BALBcJ_G0031940.1 mouse_genomes_project 7 27021004 27044037 + MGP_BALBcJ_P0082687 Fbxo17 protein_coding protein_coding MGP_BALBcJ_T0082688.1 MGP_BALBcJ_G0031940.1 mouse_genomes_project 7 27038381 27043375 + MGP_BALBcJ_P0082688 Fbxo17 protein_coding protein_coding MGP_BALBcJ_T0085882.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110238681 110241601 - Dennd5a protein_coding retained_intron MGP_BALBcJ_T0085883.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110238681 110306920 - MGP_BALBcJ_P0085883 Dennd5a protein_coding protein_coding MGP_BALBcJ_T0085884.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110238681 110306990 - MGP_BALBcJ_P0085884 Dennd5a protein_coding protein_coding MGP_BALBcJ_T0085885.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110241281 110242458 - Dennd5a protein_coding retained_intron MGP_BALBcJ_T0085886.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110243973 110245366 - Dennd5a protein_coding retained_intron MGP_BALBcJ_T0085887.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110252117 110266559 - Dennd5a protein_coding retained_intron MGP_BALBcJ_T0085888.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110267172 110271305 - Dennd5a protein_coding processed_transcript MGP_BALBcJ_T0085889.1 MGP_BALBcJ_G0032838.1 mouse_genomes_project 7 110280077 110306843 - Dennd5a protein_coding processed_transcript MGP_BALBcJ_T0084585.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79368180 79406579 + MGP_BALBcJ_P0084585 Ticrr protein_coding protein_coding MGP_BALBcJ_T0084586.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79368206 79369660 + Ticrr protein_coding retained_intron MGP_BALBcJ_T0084587.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79368215 79406565 + MGP_BALBcJ_P0084587 Ticrr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084588.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79368229 79392965 + MGP_BALBcJ_P0084588 Ticrr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084589.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79368231 79402351 + MGP_BALBcJ_P0084589 Ticrr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084590.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79378179 79384354 + Ticrr protein_coding processed_transcript MGP_BALBcJ_T0084591.1 MGP_BALBcJ_G0032382.1 mouse_genomes_project 7 79379570 79384354 + Ticrr protein_coding retained_intron MGP_BALBcJ_T0087901.1 MGP_BALBcJ_G0033264.1 mouse_genomes_project 7 144556019 144559302 - MGP_BALBcJ_P0087901 Mrgprg protein_coding protein_coding MGP_BALBcJ_T0085815.1 MGP_BALBcJ_G0032805.1 mouse_genomes_project 7 108640076 108641009 + MGP_BALBcJ_P0085815 Olfr491 protein_coding protein_coding MGP_BALBcJ_T0098644.1 MGP_BALBcJ_G0036698.1 mouse_genomes_project 7 65956231 65956321 - Gm23957 rRNA rRNA MGP_BALBcJ_T0087203.1 MGP_BALBcJ_G0033097.1 mouse_genomes_project 7 133212362 133232410 + Lhpp protein_coding processed_transcript MGP_BALBcJ_T0087204.1 MGP_BALBcJ_G0033097.1 mouse_genomes_project 7 133212363 133309458 + MGP_BALBcJ_P0087204 Lhpp protein_coding protein_coding MGP_BALBcJ_T0087205.1 MGP_BALBcJ_G0033097.1 mouse_genomes_project 7 133212391 133273777 + Lhpp protein_coding processed_transcript MGP_BALBcJ_T0087206.1 MGP_BALBcJ_G0033097.1 mouse_genomes_project 7 133212432 133308815 + Lhpp protein_coding processed_transcript MGP_BALBcJ_T0087207.1 MGP_BALBcJ_G0033097.1 mouse_genomes_project 7 133232154 133244011 + Lhpp protein_coding retained_intron MGP_BALBcJ_T0002317.1 MGP_BALBcJ_G0002228.1 mouse_genomes_project 7 144110283 144111685 + TEC TEC MGP_BALBcJ_T0085628.1 MGP_BALBcJ_G0032714.1 mouse_genomes_project 7 104939973 104940924 + MGP_BALBcJ_P0085628 Olfr665 protein_coding protein_coding MGP_BALBcJ_T0102690.1 MGP_BALBcJ_G0040505.1 mouse_genomes_project 7 9566400 9567351 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101331.1 MGP_BALBcJ_G0039367.1 mouse_genomes_project 7 59295170 59295237 - Snord64 snoRNA snoRNA MGP_BALBcJ_T0087305.1 MGP_BALBcJ_G0033117.1 mouse_genomes_project 7 136201209 136218729 - MGP_BALBcJ_P0087305 Clrn3 protein_coding protein_coding MGP_BALBcJ_T0081609.1 MGP_BALBcJ_G0031630.1 mouse_genomes_project 7 10152967 10167245 - MGP_BALBcJ_P0081609 Zfp329 protein_coding protein_coding MGP_BALBcJ_T0081610.1 MGP_BALBcJ_G0031630.1 mouse_genomes_project 7 10152972 10167249 - MGP_BALBcJ_P0081610 Zfp329 protein_coding protein_coding MGP_BALBcJ_T0081611.1 MGP_BALBcJ_G0031630.1 mouse_genomes_project 7 10154057 10156495 - Zfp329 protein_coding processed_transcript MGP_BALBcJ_T0081612.1 MGP_BALBcJ_G0031630.1 mouse_genomes_project 7 10154520 10167243 - MGP_BALBcJ_P0081612 Zfp329 protein_coding protein_coding MGP_BALBcJ_T0005215.1 MGP_BALBcJ_G0004435.1 mouse_genomes_project 7 79777070 79789381 - Gm21057 antisense antisense MGP_BALBcJ_T0005216.1 MGP_BALBcJ_G0004435.1 mouse_genomes_project 7 79787900 79789401 - Gm21057 antisense antisense MGP_BALBcJ_T0101336.1 MGP_BALBcJ_G0039372.1 mouse_genomes_project 7 69574216 69574345 - Gm24120 snoRNA snoRNA MGP_BALBcJ_T0086817.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127957474 127969222 + Prr14 protein_coding processed_transcript MGP_BALBcJ_T0086818.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127968285 127974985 + MGP_BALBcJ_P0086818 Prr14 protein_coding protein_coding MGP_BALBcJ_T0086819.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127969244 127972080 + MGP_BALBcJ_P0086819 Prr14 protein_coding protein_coding MGP_BALBcJ_T0086820.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127969254 127971943 + MGP_BALBcJ_P0086820 Prr14 protein_coding protein_coding MGP_BALBcJ_T0086821.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127969277 127972051 + Prr14 protein_coding retained_intron MGP_BALBcJ_T0086822.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127969674 127971330 + Prr14 protein_coding retained_intron MGP_BALBcJ_T0086823.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127969715 127974984 + MGP_BALBcJ_P0086823 Prr14 protein_coding protein_coding MGP_BALBcJ_T0086824.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127970126 127973438 + Prr14 protein_coding retained_intron MGP_BALBcJ_T0086825.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127971848 127973496 + MGP_BALBcJ_P0086825 Prr14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086826.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127973726 127974983 + Prr14 protein_coding retained_intron MGP_BALBcJ_T0086827.1 MGP_BALBcJ_G0033023.1 mouse_genomes_project 7 127973744 127974981 + MGP_BALBcJ_P0086827 Prr14 protein_coding protein_coding MGP_BALBcJ_T0085693.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105760616 105766834 - MGP_BALBcJ_P0085693 Arfip2 protein_coding protein_coding MGP_BALBcJ_T0085694.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105760620 105766332 - Arfip2 protein_coding retained_intron MGP_BALBcJ_T0085695.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105762034 105766732 - MGP_BALBcJ_P0085695 Arfip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085696.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105762037 105764316 - Arfip2 protein_coding processed_transcript MGP_BALBcJ_T0085697.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105762069 105766755 - MGP_BALBcJ_P0085697 Arfip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085698.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105762070 105766769 - MGP_BALBcJ_P0085698 Arfip2 protein_coding protein_coding MGP_BALBcJ_T0085699.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105763315 105764459 - Arfip2 protein_coding processed_transcript MGP_BALBcJ_T0085700.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105763533 105764329 - Arfip2 protein_coding processed_transcript MGP_BALBcJ_T0085701.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105763601 105766726 - MGP_BALBcJ_P0085701 Arfip2 protein_coding protein_coding MGP_BALBcJ_T0085702.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105764261 105766753 - MGP_BALBcJ_P0085702 Arfip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085703.1 MGP_BALBcJ_G0032744.1 mouse_genomes_project 7 105765004 105766758 - Arfip2 protein_coding retained_intron MGP_BALBcJ_T0015675.1 MGP_BALBcJ_G0013772.1 mouse_genomes_project 7 1587296 1587897 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085537.1 MGP_BALBcJ_G0032656.1 mouse_genomes_project 7 103730392 103731355 + MGP_BALBcJ_P0085537 Olfr619 protein_coding protein_coding MGP_BALBcJ_T0085573.1 MGP_BALBcJ_G0032689.1 mouse_genomes_project 7 104289627 104291925 - MGP_BALBcJ_P0085573 Ubqlnl protein_coding protein_coding MGP_BALBcJ_T0010831.1 MGP_BALBcJ_G0008956.1 mouse_genomes_project 7 25412375 25412463 - Mir3101 miRNA miRNA MGP_BALBcJ_T0015806.1 MGP_BALBcJ_G0013903.1 mouse_genomes_project 7 70113929 70114939 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087881.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144325641 144369050 - MGP_BALBcJ_P0087881 Cars protein_coding protein_coding MGP_BALBcJ_T0087882.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144326118 144369016 - MGP_BALBcJ_P0087882 Cars protein_coding protein_coding MGP_BALBcJ_T0087883.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144330123 144337173 - Cars protein_coding processed_transcript MGP_BALBcJ_T0087884.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144332969 144337939 - Cars protein_coding retained_intron MGP_BALBcJ_T0087885.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144337749 144339016 - Cars protein_coding processed_transcript MGP_BALBcJ_T0087886.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144338864 144343418 - Cars protein_coding retained_intron MGP_BALBcJ_T0087887.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144354731 144365714 - Cars protein_coding processed_transcript MGP_BALBcJ_T0087888.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144356132 144368641 - Cars protein_coding processed_transcript MGP_BALBcJ_T0087889.1 MGP_BALBcJ_G0033259.1 mouse_genomes_project 7 144361407 144368991 - Cars protein_coding processed_transcript MGP_BALBcJ_T0083236.1 MGP_BALBcJ_G0032060.1 mouse_genomes_project 7 32901432 32921630 - MGP_BALBcJ_P0083236 Pdcd2l protein_coding protein_coding MGP_BALBcJ_T0083237.1 MGP_BALBcJ_G0032060.1 mouse_genomes_project 7 32901566 32921577 - MGP_BALBcJ_P0083237 Pdcd2l protein_coding protein_coding MGP_BALBcJ_T0083238.1 MGP_BALBcJ_G0032060.1 mouse_genomes_project 7 32905905 32917750 - Pdcd2l protein_coding retained_intron MGP_BALBcJ_T0083239.1 MGP_BALBcJ_G0032060.1 mouse_genomes_project 7 32917811 32921115 - Pdcd2l protein_coding processed_transcript MGP_BALBcJ_T0086702.1 MGP_BALBcJ_G0032997.1 mouse_genomes_project 7 127436321 127439912 - MGP_BALBcJ_P0086702 protein_coding protein_coding MGP_BALBcJ_T0086703.1 MGP_BALBcJ_G0032997.1 mouse_genomes_project 7 127436741 127440335 - MGP_BALBcJ_P0086703 protein_coding protein_coding MGP_BALBcJ_T0086704.1 MGP_BALBcJ_G0032997.1 mouse_genomes_project 7 127436760 127440334 - MGP_BALBcJ_P0086704 protein_coding protein_coding MGP_BALBcJ_T0084909.1 MGP_BALBcJ_G0032459.1 mouse_genomes_project 7 86150838 86151894 - MGP_BALBcJ_P0084909 Olfr308 protein_coding protein_coding MGP_BALBcJ_T0081469.1 MGP_BALBcJ_G0031553.1 mouse_genomes_project 7 1950932 1959034 - MGP_BALBcJ_P0081469 Sbk2 protein_coding protein_coding MGP_BALBcJ_T0081470.1 MGP_BALBcJ_G0031553.1 mouse_genomes_project 7 1951876 1959037 - MGP_BALBcJ_P0081470 Sbk2 protein_coding protein_coding MGP_BALBcJ_T0081471.1 MGP_BALBcJ_G0031553.1 mouse_genomes_project 7 1952317 1959043 - MGP_BALBcJ_P0081471 Sbk2 protein_coding protein_coding MGP_BALBcJ_T0081472.1 MGP_BALBcJ_G0031553.1 mouse_genomes_project 7 1955776 1959079 - Sbk2 protein_coding processed_transcript MGP_BALBcJ_T0015777.1 MGP_BALBcJ_G0013874.1 mouse_genomes_project 7 43618313 43619241 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015788.1 MGP_BALBcJ_G0013885.1 mouse_genomes_project 7 55471208 55471918 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087453.1 MGP_BALBcJ_G0033170.1 mouse_genomes_project 7 141402239 141403274 + MGP_BALBcJ_P0087453 Olfr45 protein_coding protein_coding MGP_BALBcJ_T0083326.1 MGP_BALBcJ_G0032076.1 mouse_genomes_project 7 34201360 34218930 + MGP_BALBcJ_P0083326 Slc7a9 protein_coding protein_coding MGP_BALBcJ_T0083327.1 MGP_BALBcJ_G0032076.1 mouse_genomes_project 7 34201604 34218930 + MGP_BALBcJ_P0083327 Slc7a9 protein_coding protein_coding MGP_BALBcJ_T0083328.1 MGP_BALBcJ_G0032076.1 mouse_genomes_project 7 34201665 34202638 + Slc7a9 protein_coding retained_intron MGP_BALBcJ_T0083329.1 MGP_BALBcJ_G0032076.1 mouse_genomes_project 7 34201667 34218897 + Slc7a9 protein_coding retained_intron MGP_BALBcJ_T0083330.1 MGP_BALBcJ_G0032076.1 mouse_genomes_project 7 34201737 34218930 + MGP_BALBcJ_P0083330 Slc7a9 protein_coding protein_coding MGP_BALBcJ_T0083331.1 MGP_BALBcJ_G0032076.1 mouse_genomes_project 7 34202403 34208118 + MGP_BALBcJ_P0083331 Slc7a9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0018402.1 MGP_BALBcJ_G0015642.1 mouse_genomes_project 7 143778803 143811610 - R74862 processed_transcript processed_transcript MGP_BALBcJ_T0018403.1 MGP_BALBcJ_G0015642.1 mouse_genomes_project 7 143789662 143811879 - R74862 processed_transcript processed_transcript MGP_BALBcJ_T0018404.1 MGP_BALBcJ_G0015642.1 mouse_genomes_project 7 143790324 143811870 - R74862 processed_transcript processed_transcript MGP_BALBcJ_T0085207.1 MGP_BALBcJ_G0032542.1 mouse_genomes_project 7 99755509 99773019 - MGP_BALBcJ_P0085207 Neu3 protein_coding protein_coding MGP_BALBcJ_T0100075.1 MGP_BALBcJ_G0038111.1 mouse_genomes_project 7 81422506 81422614 + Gm26149 snRNA snRNA MGP_BALBcJ_T0102794.1 MGP_BALBcJ_G0040609.1 mouse_genomes_project 7 85594380 85594700 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011663.1 MGP_BALBcJ_G0009788.1 mouse_genomes_project 7 35530474 35530770 - Gm24550 misc_RNA misc_RNA MGP_BALBcJ_T0084074.1 MGP_BALBcJ_G0032272.1 mouse_genomes_project 7 46513643 46570034 - MGP_BALBcJ_P0084074 Ptpn5 protein_coding protein_coding MGP_BALBcJ_T0084075.1 MGP_BALBcJ_G0032272.1 mouse_genomes_project 7 46513647 46569028 - MGP_BALBcJ_P0084075 Ptpn5 protein_coding protein_coding MGP_BALBcJ_T0084035.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46185906 46223017 - MGP_BALBcJ_P0084035 Hps5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084036.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46185906 46223366 - MGP_BALBcJ_P0084036 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084037.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46185906 46223338 - MGP_BALBcJ_P0084037 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084038.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46185912 46223220 - MGP_BALBcJ_P0084038 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084039.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46186419 46223017 - Hps5 protein_coding retained_intron MGP_BALBcJ_T0084040.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46186680 46194651 - Hps5 protein_coding processed_transcript MGP_BALBcJ_T0084041.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46188384 46200541 - MGP_BALBcJ_P0084041 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084042.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46190532 46197612 - MGP_BALBcJ_P0084042 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084043.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46192612 46194094 - Hps5 protein_coding retained_intron MGP_BALBcJ_T0084044.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46201463 46204047 - Hps5 protein_coding retained_intron MGP_BALBcJ_T0084045.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46212138 46223403 - MGP_BALBcJ_P0084045 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084046.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46215642 46223042 - MGP_BALBcJ_P0084046 Hps5 protein_coding protein_coding MGP_BALBcJ_T0084047.1 MGP_BALBcJ_G0032263.1 mouse_genomes_project 7 46216424 46218427 - Hps5 protein_coding processed_transcript MGP_BALBcJ_T0083671.1 MGP_BALBcJ_G0032165.1 mouse_genomes_project 7 44034004 44035275 + MGP_BALBcJ_P0083671 protein_coding protein_coding MGP_BALBcJ_T0015686.1 MGP_BALBcJ_G0013783.1 mouse_genomes_project 7 9940278 9941725 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081921.1 MGP_BALBcJ_G0031730.1 mouse_genomes_project 7 16766530 16790353 + MGP_BALBcJ_P0081921 Nova2 protein_coding protein_coding MGP_BALBcJ_T0008848.1 MGP_BALBcJ_G0007144.1 mouse_genomes_project 7 42915707 42916181 - Gm44819 lincRNA lincRNA MGP_BALBcJ_T0087507.1 MGP_BALBcJ_G0033186.1 mouse_genomes_project 7 141666462 141667940 - MGP_BALBcJ_P0087507 Ifitm2 protein_coding protein_coding MGP_BALBcJ_T0002276.1 MGP_BALBcJ_G0002187.1 mouse_genomes_project 7 79751073 79753029 + TEC TEC MGP_BALBcJ_T0008851.1 MGP_BALBcJ_G0007147.1 mouse_genomes_project 7 43836977 43837871 + Gm45123 lincRNA lincRNA MGP_BALBcJ_T0086183.1 MGP_BALBcJ_G0032898.1 mouse_genomes_project 7 119914620 119931110 - MGP_BALBcJ_P0086183 Umod protein_coding protein_coding MGP_BALBcJ_T0087017.1 MGP_BALBcJ_G0033060.1 mouse_genomes_project 7 128746225 128746980 + Armc5 protein_coding processed_transcript MGP_BALBcJ_T0087018.1 MGP_BALBcJ_G0033060.1 mouse_genomes_project 7 128746240 128754307 + MGP_BALBcJ_P0087018 Armc5 protein_coding protein_coding MGP_BALBcJ_T0084151.1 MGP_BALBcJ_G0032300.1 mouse_genomes_project 7 51603580 51608176 - MGP_BALBcJ_P0084151 1700015G11Rik protein_coding protein_coding MGP_BALBcJ_T0084152.1 MGP_BALBcJ_G0032300.1 mouse_genomes_project 7 51603582 51608151 - MGP_BALBcJ_P0084152 1700015G11Rik protein_coding protein_coding MGP_BALBcJ_T0084153.1 MGP_BALBcJ_G0032300.1 mouse_genomes_project 7 51603584 51608143 - MGP_BALBcJ_P0084153 1700015G11Rik protein_coding protein_coding MGP_BALBcJ_T0084154.1 MGP_BALBcJ_G0032300.1 mouse_genomes_project 7 51603587 51608130 - MGP_BALBcJ_P0084154 1700015G11Rik protein_coding protein_coding MGP_BALBcJ_T0083082.1 MGP_BALBcJ_G0032030.1 mouse_genomes_project 7 29215840 29221264 - MGP_BALBcJ_P0083082 Ffar2 protein_coding protein_coding MGP_BALBcJ_T0083083.1 MGP_BALBcJ_G0032030.1 mouse_genomes_project 7 29215849 29218628 - MGP_BALBcJ_P0083083 Ffar2 protein_coding protein_coding MGP_BALBcJ_T0083084.1 MGP_BALBcJ_G0032030.1 mouse_genomes_project 7 29216604 29219137 - MGP_BALBcJ_P0083084 Ffar2 protein_coding protein_coding MGP_BALBcJ_T0083085.1 MGP_BALBcJ_G0032030.1 mouse_genomes_project 7 29217056 29218627 - MGP_BALBcJ_P0083085 Ffar2 protein_coding protein_coding MGP_BALBcJ_T0083086.1 MGP_BALBcJ_G0032030.1 mouse_genomes_project 7 29217174 29218466 - MGP_BALBcJ_P0083086 Ffar2 protein_coding protein_coding MGP_BALBcJ_T0083087.1 MGP_BALBcJ_G0032030.1 mouse_genomes_project 7 29217201 29218636 - MGP_BALBcJ_P0083087 Ffar2 protein_coding protein_coding MGP_BALBcJ_T0084657.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014435 80036197 + MGP_BALBcJ_P0084657 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084658.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014436 80036197 + MGP_BALBcJ_P0084658 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084659.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014450 80032673 + Prc1 protein_coding retained_intron MGP_BALBcJ_T0084660.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014458 80035517 + MGP_BALBcJ_P0084660 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084661.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014459 80024317 + Prc1 protein_coding retained_intron MGP_BALBcJ_T0084662.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014464 80036189 + MGP_BALBcJ_P0084662 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084663.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014490 80036192 + MGP_BALBcJ_P0084663 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084664.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80014498 80024507 + Prc1 protein_coding retained_intron MGP_BALBcJ_T0084665.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80024280 80025851 + Prc1 protein_coding retained_intron MGP_BALBcJ_T0084666.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80024614 80030796 + MGP_BALBcJ_P0084666 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084667.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80029298 80036195 + MGP_BALBcJ_P0084667 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084668.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80030760 80033421 + MGP_BALBcJ_P0084668 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084669.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80031016 80035450 + MGP_BALBcJ_P0084669 Prc1 protein_coding protein_coding MGP_BALBcJ_T0084670.1 MGP_BALBcJ_G0032401.1 mouse_genomes_project 7 80032221 80033624 + MGP_BALBcJ_P0084670 Prc1 protein_coding protein_coding MGP_BALBcJ_T0102722.1 MGP_BALBcJ_G0040537.1 mouse_genomes_project 7 29332815 29333288 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015834.1 MGP_BALBcJ_G0013931.1 mouse_genomes_project 7 88334176 88334732 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082975.1 MGP_BALBcJ_G0032008.1 mouse_genomes_project 7 28905237 28917110 - MGP_BALBcJ_P0082975 Arhgap33 protein_coding protein_coding MGP_BALBcJ_T0081563.1 MGP_BALBcJ_G0031597.1 mouse_genomes_project 7 3829810 4061691 + MGP_BALBcJ_P0081563 Usp29 protein_coding protein_coding MGP_BALBcJ_T0081564.1 MGP_BALBcJ_G0031597.1 mouse_genomes_project 7 3829968 4056236 + MGP_BALBcJ_P0081564 Usp29 protein_coding protein_coding MGP_BALBcJ_T0081565.1 MGP_BALBcJ_G0031597.1 mouse_genomes_project 7 4043791 4059289 + MGP_BALBcJ_P0081565 Usp29 protein_coding protein_coding MGP_BALBcJ_T0081566.1 MGP_BALBcJ_G0031597.1 mouse_genomes_project 7 4055641 4058251 + MGP_BALBcJ_P0081566 Usp29 protein_coding protein_coding MGP_BALBcJ_T0015864.1 MGP_BALBcJ_G0013961.1 mouse_genomes_project 7 107496932 107498379 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086754.1 MGP_BALBcJ_G0033008.1 mouse_genomes_project 7 127583703 127586334 + MGP_BALBcJ_P0086754 AI467606 protein_coding protein_coding MGP_BALBcJ_T0086755.1 MGP_BALBcJ_G0033008.1 mouse_genomes_project 7 127583770 127585341 + MGP_BALBcJ_P0086755 AI467606 protein_coding protein_coding MGP_BALBcJ_T0085997.1 MGP_BALBcJ_G0032861.1 mouse_genomes_project 7 113595538 113711648 + MGP_BALBcJ_P0085997 Arntl protein_coding protein_coding MGP_BALBcJ_T0086143.1 MGP_BALBcJ_G0032889.1 mouse_genomes_project 7 119056985 119136762 + MGP_BALBcJ_P0086143 Tmc5 protein_coding protein_coding MGP_BALBcJ_T0086144.1 MGP_BALBcJ_G0032889.1 mouse_genomes_project 7 119056985 119136763 + MGP_BALBcJ_P0086144 Tmc5 protein_coding protein_coding MGP_BALBcJ_T0086145.1 MGP_BALBcJ_G0032889.1 mouse_genomes_project 7 119059797 119136763 + MGP_BALBcJ_P0086145 Tmc5 protein_coding protein_coding MGP_BALBcJ_T0086146.1 MGP_BALBcJ_G0032889.1 mouse_genomes_project 7 119094633 119136763 + MGP_BALBcJ_P0086146 Tmc5 protein_coding protein_coding MGP_BALBcJ_T0081252.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 559156 575040 - MGP_BALBcJ_P0081252 Mboat7 protein_coding protein_coding MGP_BALBcJ_T0081253.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 559160 573631 - MGP_BALBcJ_P0081253 Mboat7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081254.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 559769 573380 - MGP_BALBcJ_P0081254 Mboat7 protein_coding protein_coding MGP_BALBcJ_T0081255.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 560142 565781 - Mboat7 protein_coding retained_intron MGP_BALBcJ_T0081256.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 564610 574469 - Mboat7 protein_coding retained_intron MGP_BALBcJ_T0081257.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 565879 574672 - MGP_BALBcJ_P0081257 Mboat7 protein_coding protein_coding MGP_BALBcJ_T0081258.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 567211 574405 - MGP_BALBcJ_P0081258 Mboat7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081259.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 567227 574405 - MGP_BALBcJ_P0081259 Mboat7 protein_coding protein_coding MGP_BALBcJ_T0081260.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 569925 574279 - MGP_BALBcJ_P0081260 Mboat7 protein_coding protein_coding MGP_BALBcJ_T0081261.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 570354 574479 - Mboat7 protein_coding retained_intron MGP_BALBcJ_T0081262.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 570652 574297 - Mboat7 protein_coding retained_intron MGP_BALBcJ_T0081263.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 571180 574455 - Mboat7 protein_coding retained_intron MGP_BALBcJ_T0081264.1 MGP_BALBcJ_G0031511.1 mouse_genomes_project 7 573213 574171 - Mboat7 protein_coding retained_intron MGP_BALBcJ_T0082735.1 MGP_BALBcJ_G0031950.1 mouse_genomes_project 7 27173003 27174847 + MGP_BALBcJ_P0082735 Lgals7 protein_coding protein_coding MGP_BALBcJ_T0082736.1 MGP_BALBcJ_G0031950.1 mouse_genomes_project 7 27173379 27175435 + MGP_BALBcJ_P0082736 Lgals7 protein_coding protein_coding MGP_BALBcJ_T0082737.1 MGP_BALBcJ_G0031950.1 mouse_genomes_project 7 27173605 27174139 + Lgals7 protein_coding processed_transcript MGP_BALBcJ_T0082030.1 MGP_BALBcJ_G0031758.1 mouse_genomes_project 7 17265811 17268377 - MGP_BALBcJ_P0082030 protein_coding protein_coding MGP_BALBcJ_T0085535.1 MGP_BALBcJ_G0032654.1 mouse_genomes_project 7 103697480 103698434 - MGP_BALBcJ_P0085535 Olfr616 protein_coding protein_coding MGP_BALBcJ_T0081646.1 MGP_BALBcJ_G0031639.1 mouse_genomes_project 7 10366760 10371610 - MGP_BALBcJ_P0081646 Zbtb45 protein_coding protein_coding MGP_BALBcJ_T0081647.1 MGP_BALBcJ_G0031639.1 mouse_genomes_project 7 10367458 10371588 - MGP_BALBcJ_P0081647 Zbtb45 protein_coding protein_coding MGP_BALBcJ_T0081543.1 MGP_BALBcJ_G0031584.1 mouse_genomes_project 7 3477171 3489809 + MGP_BALBcJ_P0081543 Zfp28 protein_coding protein_coding MGP_BALBcJ_T0015748.1 MGP_BALBcJ_G0013845.1 mouse_genomes_project 7 32488014 32488800 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084622.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79809682 79830252 - MGP_BALBcJ_P0084622 Idh2 protein_coding protein_coding MGP_BALBcJ_T0084623.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79809686 79830192 - MGP_BALBcJ_P0084623 Idh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084624.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79809865 79813239 - Idh2 protein_coding retained_intron MGP_BALBcJ_T0084625.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79809879 79810865 - Idh2 protein_coding retained_intron MGP_BALBcJ_T0084626.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79809895 79830164 - MGP_BALBcJ_P0084626 Idh2 protein_coding protein_coding MGP_BALBcJ_T0084627.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79810863 79815711 - MGP_BALBcJ_P0084627 Idh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084628.1 MGP_BALBcJ_G0032393.1 mouse_genomes_project 7 79813001 79813969 - Idh2 protein_coding retained_intron MGP_BALBcJ_T0085525.1 MGP_BALBcJ_G0032644.1 mouse_genomes_project 7 103558130 103563885 + MGP_BALBcJ_P0085525 protein_coding protein_coding MGP_BALBcJ_T0085236.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100328694 100426117 + MGP_BALBcJ_P0085236 C2cd3 protein_coding protein_coding MGP_BALBcJ_T0085237.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100328694 100426806 + MGP_BALBcJ_P0085237 C2cd3 protein_coding protein_coding MGP_BALBcJ_T0085238.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100328707 100379975 + MGP_BALBcJ_P0085238 C2cd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085239.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100328742 100363796 + C2cd3 protein_coding retained_intron MGP_BALBcJ_T0085240.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100352806 100411118 + MGP_BALBcJ_P0085240 C2cd3 protein_coding protein_coding MGP_BALBcJ_T0085241.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100377109 100379701 + C2cd3 protein_coding retained_intron MGP_BALBcJ_T0085242.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100385746 100388960 + MGP_BALBcJ_P0085242 C2cd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085243.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100386774 100426808 + MGP_BALBcJ_P0085243 C2cd3 protein_coding protein_coding MGP_BALBcJ_T0085244.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100400033 100401437 + C2cd3 protein_coding retained_intron MGP_BALBcJ_T0085245.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100405489 100411507 + MGP_BALBcJ_P0085245 C2cd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085246.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100408013 100411466 + C2cd3 protein_coding retained_intron MGP_BALBcJ_T0085247.1 MGP_BALBcJ_G0032553.1 mouse_genomes_project 7 100420855 100426808 + MGP_BALBcJ_P0085247 C2cd3 protein_coding protein_coding MGP_BALBcJ_T0084916.1 MGP_BALBcJ_G0032466.1 mouse_genomes_project 7 86335101 86336100 - MGP_BALBcJ_P0084916 Olfr298 protein_coding protein_coding MGP_BALBcJ_T0087307.1 MGP_BALBcJ_G0033119.1 mouse_genomes_project 7 136380032 136406667 - MGP_BALBcJ_P0087307 Mki67 protein_coding protein_coding MGP_BALBcJ_T0015868.1 MGP_BALBcJ_G0013965.1 mouse_genomes_project 7 110878389 110878982 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087605.1 MGP_BALBcJ_G0033209.1 mouse_genomes_project 7 142131038 142142379 + MGP_BALBcJ_P0087605 Taldo1 protein_coding protein_coding MGP_BALBcJ_T0087606.1 MGP_BALBcJ_G0033209.1 mouse_genomes_project 7 142131082 142138531 + Taldo1 protein_coding retained_intron MGP_BALBcJ_T0087607.1 MGP_BALBcJ_G0033209.1 mouse_genomes_project 7 142139564 142141617 + Taldo1 protein_coding retained_intron MGP_BALBcJ_T0081996.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17191489 17203002 + MGP_BALBcJ_P0081996 Ercc1 protein_coding protein_coding MGP_BALBcJ_T0081997.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17191863 17202058 + Ercc1 protein_coding retained_intron MGP_BALBcJ_T0081998.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17191869 17197538 + Ercc1 protein_coding retained_intron MGP_BALBcJ_T0081999.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17191911 17201428 + MGP_BALBcJ_P0081999 Ercc1 protein_coding protein_coding MGP_BALBcJ_T0082000.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17191922 17197185 + MGP_BALBcJ_P0082000 Ercc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082001.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17195324 17199445 + MGP_BALBcJ_P0082001 Ercc1 protein_coding protein_coding MGP_BALBcJ_T0082002.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17196476 17200935 + Ercc1 protein_coding processed_transcript MGP_BALBcJ_T0082003.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17198911 17201764 + Ercc1 protein_coding retained_intron MGP_BALBcJ_T0082004.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17199372 17203000 + MGP_BALBcJ_P0082004 Ercc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082005.1 MGP_BALBcJ_G0031752.1 mouse_genomes_project 7 17200955 17203001 + Ercc1 protein_coding retained_intron MGP_BALBcJ_T0082023.1 MGP_BALBcJ_G0031756.1 mouse_genomes_project 7 17241377 17250732 - MGP_BALBcJ_P0082023 Klc3 protein_coding protein_coding MGP_BALBcJ_T0082024.1 MGP_BALBcJ_G0031756.1 mouse_genomes_project 7 17241380 17246546 - MGP_BALBcJ_P0082024 Klc3 protein_coding protein_coding MGP_BALBcJ_T0082025.1 MGP_BALBcJ_G0031756.1 mouse_genomes_project 7 17241380 17246503 - MGP_BALBcJ_P0082025 Klc3 protein_coding protein_coding MGP_BALBcJ_T0082026.1 MGP_BALBcJ_G0031756.1 mouse_genomes_project 7 17241441 17242923 - Klc3 protein_coding retained_intron MGP_BALBcJ_T0082027.1 MGP_BALBcJ_G0031756.1 mouse_genomes_project 7 17241504 17246175 - MGP_BALBcJ_P0082027 Klc3 protein_coding protein_coding MGP_BALBcJ_T0082028.1 MGP_BALBcJ_G0031756.1 mouse_genomes_project 7 17242294 17243523 - Klc3 protein_coding retained_intron MGP_BALBcJ_T0102787.1 MGP_BALBcJ_G0040602.1 mouse_genomes_project 7 85229879 85230154 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0082592.1 MGP_BALBcJ_G0031910.1 mouse_genomes_project 7 26178625 26203541 - MGP_BALBcJ_P0082592 Zfp974 protein_coding protein_coding MGP_BALBcJ_T0100048.1 MGP_BALBcJ_G0038084.1 mouse_genomes_project 7 10288628 10288736 + Gm26325 snRNA snRNA MGP_BALBcJ_T0102672.1 MGP_BALBcJ_G0040487.1 mouse_genomes_project 7 7504898 7505803 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0008878.1 MGP_BALBcJ_G0007166.1 mouse_genomes_project 7 67938245 67953598 - Gm16158 lincRNA lincRNA MGP_BALBcJ_T0008879.1 MGP_BALBcJ_G0007166.1 mouse_genomes_project 7 67938245 67953617 - Gm16158 lincRNA lincRNA MGP_BALBcJ_T0010832.1 MGP_BALBcJ_G0008957.1 mouse_genomes_project 7 25442736 25442856 + Mir1191 miRNA miRNA MGP_BALBcJ_T0005142.1 MGP_BALBcJ_G0004382.1 mouse_genomes_project 7 22088947 22093090 - Gm44793 antisense antisense MGP_BALBcJ_T0081236.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 521961 526286 + Cnot3 protein_coding retained_intron MGP_BALBcJ_T0081237.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 521983 539538 + Cnot3 protein_coding retained_intron MGP_BALBcJ_T0081238.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 522002 528541 + MGP_BALBcJ_P0081238 Cnot3 protein_coding protein_coding MGP_BALBcJ_T0081239.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 522032 539256 + MGP_BALBcJ_P0081239 Cnot3 protein_coding unknown_likely_coding MGP_BALBcJ_T0081240.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 522045 539539 + MGP_BALBcJ_P0081240 Cnot3 protein_coding protein_coding MGP_BALBcJ_T0081241.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 527998 532517 + MGP_BALBcJ_P0081241 Cnot3 protein_coding protein_coding MGP_BALBcJ_T0081242.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 528260 535761 + MGP_BALBcJ_P0081242 Cnot3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081243.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 529921 539459 + MGP_BALBcJ_P0081243 Cnot3 protein_coding protein_coding MGP_BALBcJ_T0081244.1 MGP_BALBcJ_G0031508.1 mouse_genomes_project 7 535191 538787 + Cnot3 protein_coding retained_intron MGP_BALBcJ_T0018367.1 MGP_BALBcJ_G0015622.1 mouse_genomes_project 7 101305726 101314165 - Gm20476 processed_transcript processed_transcript MGP_BALBcJ_T0082434.1 MGP_BALBcJ_G0031871.1 mouse_genomes_project 7 24568220 24612254 + MGP_BALBcJ_P0082434 Nlrp4a protein_coding protein_coding MGP_BALBcJ_T0082435.1 MGP_BALBcJ_G0031871.1 mouse_genomes_project 7 24568721 24611328 + MGP_BALBcJ_P0082435 Nlrp4a protein_coding protein_coding MGP_BALBcJ_T0082436.1 MGP_BALBcJ_G0031871.1 mouse_genomes_project 7 24568753 24584849 + Nlrp4a protein_coding processed_transcript MGP_BALBcJ_T0082437.1 MGP_BALBcJ_G0031871.1 mouse_genomes_project 7 24568753 24597826 + MGP_BALBcJ_P0082437 Nlrp4a protein_coding protein_coding MGP_BALBcJ_T0102762.1 MGP_BALBcJ_G0040577.1 mouse_genomes_project 7 47449548 47597789 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0005207.1 MGP_BALBcJ_G0004430.1 mouse_genomes_project 7 78265231 78267440 + Gm9885 antisense antisense MGP_BALBcJ_T0005208.1 MGP_BALBcJ_G0004430.1 mouse_genomes_project 7 78265231 78267436 + Gm9885 antisense antisense MGP_BALBcJ_T0099011.1 MGP_BALBcJ_G0037054.1 mouse_genomes_project 7 89205237 89237255 - sense_intronic sense_intronic MGP_BALBcJ_T0015909.1 MGP_BALBcJ_G0014006.1 mouse_genomes_project 7 141493352 141493839 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0086721.1 MGP_BALBcJ_G0033001.1 mouse_genomes_project 7 127492498 127507503 - MGP_BALBcJ_P0086721 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085559.1 MGP_BALBcJ_G0032675.1 mouse_genomes_project 7 104104201 104105140 + MGP_BALBcJ_P0085559 Olfr633 protein_coding protein_coding MGP_BALBcJ_T0084816.1 MGP_BALBcJ_G0032426.1 mouse_genomes_project 7 81534106 81543231 - MGP_BALBcJ_P0084816 3110040N11Rik protein_coding protein_coding MGP_BALBcJ_T0084817.1 MGP_BALBcJ_G0032426.1 mouse_genomes_project 7 81536846 81543254 - 3110040N11Rik protein_coding processed_transcript MGP_BALBcJ_T0084818.1 MGP_BALBcJ_G0032426.1 mouse_genomes_project 7 81536846 81542449 - 3110040N11Rik protein_coding processed_transcript MGP_BALBcJ_T0084819.1 MGP_BALBcJ_G0032426.1 mouse_genomes_project 7 81536865 81542894 - 3110040N11Rik protein_coding processed_transcript MGP_BALBcJ_T0084820.1 MGP_BALBcJ_G0032426.1 mouse_genomes_project 7 81536919 81543250 - MGP_BALBcJ_P0084820 3110040N11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084120.1 MGP_BALBcJ_G0032290.1 mouse_genomes_project 7 49337612 49352513 + MGP_BALBcJ_P0084120 Htatip2 protein_coding protein_coding MGP_BALBcJ_T0084121.1 MGP_BALBcJ_G0032290.1 mouse_genomes_project 7 49337720 49352517 + MGP_BALBcJ_P0084121 Htatip2 protein_coding unknown_likely_coding MGP_BALBcJ_T0081230.1 MGP_BALBcJ_G0031507.1 mouse_genomes_project 7 506679 519178 + MGP_BALBcJ_P0081230 Prpf31 protein_coding protein_coding MGP_BALBcJ_T0081231.1 MGP_BALBcJ_G0031507.1 mouse_genomes_project 7 506679 519179 + MGP_BALBcJ_P0081231 Prpf31 protein_coding protein_coding MGP_BALBcJ_T0081232.1 MGP_BALBcJ_G0031507.1 mouse_genomes_project 7 506686 508116 + Prpf31 protein_coding retained_intron MGP_BALBcJ_T0081233.1 MGP_BALBcJ_G0031507.1 mouse_genomes_project 7 506753 513751 + MGP_BALBcJ_P0081233 Prpf31 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081234.1 MGP_BALBcJ_G0031507.1 mouse_genomes_project 7 507251 517922 + MGP_BALBcJ_P0081234 Prpf31 protein_coding protein_coding MGP_BALBcJ_T0081235.1 MGP_BALBcJ_G0031507.1 mouse_genomes_project 7 512789 513751 + Prpf31 protein_coding retained_intron MGP_BALBcJ_T0082050.1 MGP_BALBcJ_G0031767.1 mouse_genomes_project 7 17436097 17459405 - MGP_BALBcJ_P0082050 Clasrp protein_coding protein_coding MGP_BALBcJ_T0010804.1 MGP_BALBcJ_G0008929.1 mouse_genomes_project 7 118099 118182 + Mir290a miRNA miRNA MGP_BALBcJ_T0081597.1 MGP_BALBcJ_G0031623.1 mouse_genomes_project 7 9704208 9705165 - MGP_BALBcJ_P0081597 Vmn1r84 protein_coding protein_coding MGP_BALBcJ_T0102804.1 MGP_BALBcJ_G0040619.1 mouse_genomes_project 7 89590613 89590826 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102740.1 MGP_BALBcJ_G0040555.1 mouse_genomes_project 7 41542194 41542436 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084821.1 MGP_BALBcJ_G0032427.1 mouse_genomes_project 7 81545859 81590105 - MGP_BALBcJ_P0084821 Btbd1 protein_coding protein_coding MGP_BALBcJ_T0102823.1 MGP_BALBcJ_G0040638.1 mouse_genomes_project 7 104704640 104705012 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081506.1 MGP_BALBcJ_G0031570.1 mouse_genomes_project 7 2331608 2383246 - MGP_BALBcJ_P0081506 Nlrp2 protein_coding protein_coding MGP_BALBcJ_T0005298.1 MGP_BALBcJ_G0004494.1 mouse_genomes_project 7 145357303 145371610 + Faddos antisense antisense MGP_BALBcJ_T0102764.1 MGP_BALBcJ_G0040579.1 mouse_genomes_project 7 47555853 47557104 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0018381.1 MGP_BALBcJ_G0015630.1 mouse_genomes_project 7 127432898 127443606 + Gm21984 processed_transcript processed_transcript MGP_BALBcJ_T0083663.1 MGP_BALBcJ_G0032161.1 mouse_genomes_project 7 43927045 43938373 + Napsa protein_coding retained_intron MGP_BALBcJ_T0083664.1 MGP_BALBcJ_G0032161.1 mouse_genomes_project 7 43927045 43943995 + MGP_BALBcJ_P0083664 Napsa protein_coding protein_coding MGP_BALBcJ_T0015705.1 MGP_BALBcJ_G0013802.1 mouse_genomes_project 7 14099216 14099955 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085248.1 MGP_BALBcJ_G0032554.1 mouse_genomes_project 7 100429645 100444857 + Ucp3 protein_coding retained_intron MGP_BALBcJ_T0085249.1 MGP_BALBcJ_G0032554.1 mouse_genomes_project 7 100429646 100445861 + MGP_BALBcJ_P0085249 Ucp3 protein_coding protein_coding MGP_BALBcJ_T0085250.1 MGP_BALBcJ_G0032554.1 mouse_genomes_project 7 100429648 100444737 + MGP_BALBcJ_P0085250 Ucp3 protein_coding protein_coding MGP_BALBcJ_T0085251.1 MGP_BALBcJ_G0032554.1 mouse_genomes_project 7 100429649 100444840 + Ucp3 protein_coding retained_intron MGP_BALBcJ_T0101313.1 MGP_BALBcJ_G0039349.1 mouse_genomes_project 7 43598243 43598333 + Snord88c snoRNA snoRNA MGP_BALBcJ_T0015838.1 MGP_BALBcJ_G0013935.1 mouse_genomes_project 7 94340175 94340307 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010885.1 MGP_BALBcJ_G0009010.1 mouse_genomes_project 7 81277777 81277850 + Mir1839 miRNA miRNA MGP_BALBcJ_T0085820.1 MGP_BALBcJ_G0032810.1 mouse_genomes_project 7 108785374 108786367 + MGP_BALBcJ_P0085820 Olfr498 protein_coding protein_coding MGP_BALBcJ_T0082118.1 MGP_BALBcJ_G0031788.1 mouse_genomes_project 7 21275859 21348617 + MGP_BALBcJ_P0082118 Nlrp5 protein_coding protein_coding MGP_BALBcJ_T0082119.1 MGP_BALBcJ_G0031788.1 mouse_genomes_project 7 21275871 21348619 + MGP_BALBcJ_P0082119 Nlrp5 protein_coding protein_coding MGP_BALBcJ_T0082120.1 MGP_BALBcJ_G0031788.1 mouse_genomes_project 7 21293227 21348615 + MGP_BALBcJ_P0082120 Nlrp5 protein_coding protein_coding MGP_BALBcJ_T0002297.1 MGP_BALBcJ_G0002208.1 mouse_genomes_project 7 123469461 123470454 - TEC TEC MGP_BALBcJ_T0084382.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66418294 66548795 + Adamts17 protein_coding retained_intron MGP_BALBcJ_T0084383.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66418294 66610153 + Adamts17 protein_coding retained_intron MGP_BALBcJ_T0084384.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66418294 66735179 + MGP_BALBcJ_P0084384 Adamts17 protein_coding protein_coding MGP_BALBcJ_T0084385.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66418372 66735183 + MGP_BALBcJ_P0084385 Adamts17 protein_coding protein_coding MGP_BALBcJ_T0084386.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66420814 66644450 + Adamts17 protein_coding processed_transcript MGP_BALBcJ_T0084387.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66429172 66451334 + Adamts17 protein_coding processed_transcript MGP_BALBcJ_T0084388.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66490000 66548795 + Adamts17 protein_coding processed_transcript MGP_BALBcJ_T0084389.1 MGP_BALBcJ_G0032347.1 mouse_genomes_project 7 66629301 66660566 + MGP_BALBcJ_P0084389 Adamts17 protein_coding protein_coding MGP_BALBcJ_T0102696.1 MGP_BALBcJ_G0040511.1 mouse_genomes_project 7 10878668 10879104 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087580.1 MGP_BALBcJ_G0033203.1 mouse_genomes_project 7 142005117 142012819 - MGP_BALBcJ_P0087580 Cdhr5 protein_coding protein_coding MGP_BALBcJ_T0087581.1 MGP_BALBcJ_G0033203.1 mouse_genomes_project 7 142005117 142012819 - MGP_BALBcJ_P0087581 Cdhr5 protein_coding protein_coding MGP_BALBcJ_T0008951.1 MGP_BALBcJ_G0007215.1 mouse_genomes_project 7 98309042 98336622 - Gm44507 lincRNA lincRNA MGP_BALBcJ_T0100058.1 MGP_BALBcJ_G0038094.1 mouse_genomes_project 7 36622109 36622215 - Gm22302 snRNA snRNA MGP_BALBcJ_T0081613.1 MGP_BALBcJ_G0031631.1 mouse_genomes_project 7 10183116 10198955 + MGP_BALBcJ_P0081613 Zfp110 protein_coding protein_coding MGP_BALBcJ_T0081614.1 MGP_BALBcJ_G0031631.1 mouse_genomes_project 7 10183171 10184444 + Zfp110 protein_coding processed_transcript MGP_BALBcJ_T0081615.1 MGP_BALBcJ_G0031631.1 mouse_genomes_project 7 10183392 10185036 + Zfp110 protein_coding retained_intron MGP_BALBcJ_T0081616.1 MGP_BALBcJ_G0031631.1 mouse_genomes_project 7 10183838 10198303 + MGP_BALBcJ_P0081616 Zfp110 protein_coding protein_coding MGP_BALBcJ_T0081617.1 MGP_BALBcJ_G0031631.1 mouse_genomes_project 7 10184640 10193281 + Zfp110 protein_coding processed_transcript MGP_BALBcJ_T0084945.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89005621 89206846 - MGP_BALBcJ_P0084945 Tmem135 protein_coding protein_coding MGP_BALBcJ_T0084946.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89007754 89017952 - Tmem135 protein_coding retained_intron MGP_BALBcJ_T0084947.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89011973 89206819 - MGP_BALBcJ_P0084947 Tmem135 protein_coding protein_coding MGP_BALBcJ_T0084948.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89017778 89023269 - Tmem135 protein_coding processed_transcript MGP_BALBcJ_T0084949.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89020099 89266992 - Tmem135 protein_coding processed_transcript MGP_BALBcJ_T0084950.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89022629 89159761 - Tmem135 protein_coding processed_transcript MGP_BALBcJ_T0084951.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89169079 89206750 - Tmem135 protein_coding retained_intron MGP_BALBcJ_T0084952.1 MGP_BALBcJ_G0032479.1 mouse_genomes_project 7 89170059 89206796 - MGP_BALBcJ_P0084952 Tmem135 protein_coding protein_coding MGP_BALBcJ_T0009015.1 MGP_BALBcJ_G0007253.1 mouse_genomes_project 7 128488102 128490225 - Gm26690 lincRNA lincRNA MGP_BALBcJ_T0015665.1 MGP_BALBcJ_G0013762.1 mouse_genomes_project 7 913920 914794 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0081973.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17010632 17049971 + MGP_BALBcJ_P0081973 Eml2 protein_coding protein_coding MGP_BALBcJ_T0081974.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015379 17050196 + MGP_BALBcJ_P0081974 Eml2 protein_coding protein_coding MGP_BALBcJ_T0081975.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015390 17050192 + MGP_BALBcJ_P0081975 Eml2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081976.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015413 17050193 + MGP_BALBcJ_P0081976 Eml2 protein_coding protein_coding MGP_BALBcJ_T0081977.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015425 17019110 + MGP_BALBcJ_P0081977 Eml2 protein_coding protein_coding MGP_BALBcJ_T0081978.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015446 17020550 + MGP_BALBcJ_P0081978 Eml2 protein_coding protein_coding MGP_BALBcJ_T0081979.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015541 17019113 + Eml2 protein_coding processed_transcript MGP_BALBcJ_T0081980.1 MGP_BALBcJ_G0031745.1 mouse_genomes_project 7 17015815 17020563 + Eml2 protein_coding retained_intron MGP_BALBcJ_T0005291.1 MGP_BALBcJ_G0004488.1 mouse_genomes_project 7 143745582 143764925 - Tspan32os antisense antisense MGP_BALBcJ_T0005292.1 MGP_BALBcJ_G0004488.1 mouse_genomes_project 7 143745582 143747389 - Tspan32os antisense antisense MGP_BALBcJ_T0015867.1 MGP_BALBcJ_G0013964.1 mouse_genomes_project 7 110776628 110777194 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0008849.1 MGP_BALBcJ_G0007145.1 mouse_genomes_project 7 43103388 43104715 - Gm44707 lincRNA lincRNA MGP_BALBcJ_T0086424.1 MGP_BALBcJ_G0032957.1 mouse_genomes_project 7 126069516 126100549 + MGP_BALBcJ_P0086424 Il21r protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086425.1 MGP_BALBcJ_G0032957.1 mouse_genomes_project 7 126088267 126102005 + MGP_BALBcJ_P0086425 Il21r protein_coding protein_coding MGP_BALBcJ_T0082374.1 MGP_BALBcJ_G0031856.1 mouse_genomes_project 7 23742327 23744125 - MGP_BALBcJ_P0082374 Bckdha protein_coding protein_coding MGP_BALBcJ_T0082375.1 MGP_BALBcJ_G0031856.1 mouse_genomes_project 7 23742327 23772542 - MGP_BALBcJ_P0082375 Bckdha protein_coding protein_coding MGP_BALBcJ_T0005121.1 MGP_BALBcJ_G0004369.1 mouse_genomes_project 7 1512296 1513953 + Gm15873 antisense antisense MGP_BALBcJ_T0005122.1 MGP_BALBcJ_G0004369.1 mouse_genomes_project 7 1512394 1516350 + Gm15873 antisense antisense MGP_BALBcJ_T0009019.1 MGP_BALBcJ_G0007257.1 mouse_genomes_project 7 129911089 129916416 - Gm44591 lincRNA lincRNA MGP_BALBcJ_T0008953.1 MGP_BALBcJ_G0007217.1 mouse_genomes_project 7 98605681 98628882 - Gm15506 lincRNA lincRNA MGP_BALBcJ_T0086800.1 MGP_BALBcJ_G0033018.1 mouse_genomes_project 7 127772481 127774649 - MGP_BALBcJ_P0086800 protein_coding protein_coding MGP_BALBcJ_T0087452.1 MGP_BALBcJ_G0033169.1 mouse_genomes_project 7 141377317 141378277 + MGP_BALBcJ_P0087452 Olfr539 protein_coding protein_coding MGP_BALBcJ_T0009022.1 MGP_BALBcJ_G0007259.1 mouse_genomes_project 7 130341197 130362484 + Gm44778 lincRNA lincRNA MGP_BALBcJ_T0008841.1 MGP_BALBcJ_G0007139.1 mouse_genomes_project 7 39839829 39849064 + Gm28307 lincRNA lincRNA MGP_BALBcJ_T0002245.1 MGP_BALBcJ_G0002157.1 mouse_genomes_project 7 73031042 73033114 + TEC TEC MGP_BALBcJ_T0081504.1 MGP_BALBcJ_G0031568.1 mouse_genomes_project 7 2144365 2145378 - MGP_BALBcJ_P0081504 Rasl2-9 protein_coding protein_coding MGP_BALBcJ_T0084641.1 MGP_BALBcJ_G0032396.1 mouse_genomes_project 7 79951139 79962446 + MGP_BALBcJ_P0084641 Gdpgp1 protein_coding protein_coding MGP_BALBcJ_T0083149.1 MGP_BALBcJ_G0032041.1 mouse_genomes_project 7 29466011 29475205 - MGP_BALBcJ_P0083149 Fxyd7 protein_coding protein_coding MGP_BALBcJ_T0083150.1 MGP_BALBcJ_G0032041.1 mouse_genomes_project 7 29466011 29475269 - MGP_BALBcJ_P0083150 Fxyd7 protein_coding protein_coding MGP_BALBcJ_T0011686.1 MGP_BALBcJ_G0009811.1 mouse_genomes_project 7 144213707 144213768 + Gm27901 misc_RNA misc_RNA MGP_BALBcJ_T0008844.1 MGP_BALBcJ_G0007142.1 mouse_genomes_project 7 42753137 42758291 - Gm2511 lincRNA lincRNA MGP_BALBcJ_T0008845.1 MGP_BALBcJ_G0007142.1 mouse_genomes_project 7 42753140 42760943 - Gm2511 lincRNA lincRNA MGP_BALBcJ_T0008846.1 MGP_BALBcJ_G0007142.1 mouse_genomes_project 7 42757540 42760520 - Gm2511 lincRNA lincRNA MGP_BALBcJ_T0100106.1 MGP_BALBcJ_G0038142.1 mouse_genomes_project 7 138797603 138797710 - Gm25798 snRNA snRNA MGP_BALBcJ_T0018383.1 MGP_BALBcJ_G0015632.1 mouse_genomes_project 7 128700833 128712258 - 4931431B13Rik processed_transcript antisense MGP_BALBcJ_T0018384.1 MGP_BALBcJ_G0015632.1 mouse_genomes_project 7 128711007 128712254 - 4931431B13Rik processed_transcript retained_intron MGP_BALBcJ_T0002315.1 MGP_BALBcJ_G0002226.1 mouse_genomes_project 7 143886124 143886183 + TEC TEC MGP_BALBcJ_T0083451.1 MGP_BALBcJ_G0032106.1 mouse_genomes_project 7 41689284 41691540 - MGP_BALBcJ_P0083451 4933421I07Rik protein_coding protein_coding MGP_BALBcJ_T0083452.1 MGP_BALBcJ_G0032106.1 mouse_genomes_project 7 41689889 41691523 - 4933421I07Rik protein_coding retained_intron MGP_BALBcJ_T0084017.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46063860 46084557 - MGP_BALBcJ_P0084017 Tph1 protein_coding protein_coding MGP_BALBcJ_T0084018.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46063891 46089708 - MGP_BALBcJ_P0084018 Tph1 protein_coding protein_coding MGP_BALBcJ_T0084019.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46064156 46082481 - MGP_BALBcJ_P0084019 Tph1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084020.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46064156 46082468 - MGP_BALBcJ_P0084020 Tph1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084021.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46066973 46068652 - Tph1 protein_coding retained_intron MGP_BALBcJ_T0084022.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46074040 46077847 - Tph1 protein_coding retained_intron MGP_BALBcJ_T0084023.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46077198 46079495 - Tph1 protein_coding retained_intron MGP_BALBcJ_T0084024.1 MGP_BALBcJ_G0032257.1 mouse_genomes_project 7 46077516 46084523 - MGP_BALBcJ_P0084024 Tph1 protein_coding protein_coding MGP_BALBcJ_T0081568.1 MGP_BALBcJ_G0031599.1 mouse_genomes_project 7 4202433 4209190 - MGP_BALBcJ_P0081568 Zfp954 protein_coding protein_coding MGP_BALBcJ_T0081776.1 MGP_BALBcJ_G0031683.1 mouse_genomes_project 7 13808272 13820954 - MGP_BALBcJ_P0081776 C5ar1 protein_coding protein_coding MGP_BALBcJ_T0081777.1 MGP_BALBcJ_G0031683.1 mouse_genomes_project 7 13808274 13820752 - MGP_BALBcJ_P0081777 C5ar1 protein_coding protein_coding MGP_BALBcJ_T0005212.1 MGP_BALBcJ_G0004433.1 mouse_genomes_project 7 79449899 79451238 + Gm44706 antisense antisense MGP_BALBcJ_T0085122.1 MGP_BALBcJ_G0032520.1 mouse_genomes_project 7 98066637 98068781 - MGP_BALBcJ_P0085122 Omp protein_coding protein_coding MGP_BALBcJ_T0085823.1 MGP_BALBcJ_G0032813.1 mouse_genomes_project 7 108945762 108946713 + MGP_BALBcJ_P0085823 Olfr507 protein_coding protein_coding MGP_BALBcJ_T0102734.1 MGP_BALBcJ_G0040549.1 mouse_genomes_project 7 32559704 32560886 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0085050.1 MGP_BALBcJ_G0032506.1 mouse_genomes_project 7 97228282 97246584 + MGP_BALBcJ_P0085050 Kctd21 protein_coding protein_coding MGP_BALBcJ_T0015792.1 MGP_BALBcJ_G0013889.1 mouse_genomes_project 7 56387216 56387642 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087182.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132011577 132047534 + MGP_BALBcJ_P0087182 Acadsb protein_coding protein_coding MGP_BALBcJ_T0087183.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132011679 132046086 + MGP_BALBcJ_P0087183 Acadsb protein_coding protein_coding MGP_BALBcJ_T0087184.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132024791 132030345 + Acadsb protein_coding retained_intron MGP_BALBcJ_T0087185.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132024826 132029145 + Acadsb protein_coding retained_intron MGP_BALBcJ_T0087186.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132028938 132032497 + Acadsb protein_coding retained_intron MGP_BALBcJ_T0087187.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132030165 132047532 + Acadsb protein_coding retained_intron MGP_BALBcJ_T0087188.1 MGP_BALBcJ_G0033088.1 mouse_genomes_project 7 132034602 132037995 + Acadsb protein_coding retained_intron MGP_BALBcJ_T0083551.1 MGP_BALBcJ_G0032142.1 mouse_genomes_project 7 43312954 43317518 + MGP_BALBcJ_P0083551 Klk1b1 protein_coding protein_coding MGP_BALBcJ_T0005139.1 MGP_BALBcJ_G0004379.1 mouse_genomes_project 7 17675454 17677527 + Gm16174 antisense antisense MGP_BALBcJ_T0086945.1 MGP_BALBcJ_G0033043.1 mouse_genomes_project 7 128373364 128375660 + Zfp646 protein_coding retained_intron MGP_BALBcJ_T0086946.1 MGP_BALBcJ_G0033043.1 mouse_genomes_project 7 128373939 128377332 + MGP_BALBcJ_P0086946 Zfp646 protein_coding protein_coding MGP_BALBcJ_T0086947.1 MGP_BALBcJ_G0033043.1 mouse_genomes_project 7 128374844 128383140 + MGP_BALBcJ_P0086947 Zfp646 protein_coding protein_coding MGP_BALBcJ_T0086948.1 MGP_BALBcJ_G0033043.1 mouse_genomes_project 7 128376454 128383136 + MGP_BALBcJ_P0086948 Zfp646 protein_coding protein_coding MGP_BALBcJ_T0086828.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127977424 127988460 + MGP_BALBcJ_P0086828 protein_coding protein_coding MGP_BALBcJ_T0086829.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127978240 127981447 + protein_coding processed_transcript MGP_BALBcJ_T0086830.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127983446 127989693 + MGP_BALBcJ_P0086830 protein_coding protein_coding MGP_BALBcJ_T0086831.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127983633 127987724 + protein_coding retained_intron MGP_BALBcJ_T0086832.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127983866 127987906 + MGP_BALBcJ_P0086832 protein_coding protein_coding MGP_BALBcJ_T0086833.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127983872 127988316 + MGP_BALBcJ_P0086833 protein_coding protein_coding MGP_BALBcJ_T0086834.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127985074 127989891 + protein_coding retained_intron MGP_BALBcJ_T0086835.1 MGP_BALBcJ_G0033024.1 mouse_genomes_project 7 127985288 127986179 + protein_coding retained_intron MGP_BALBcJ_T0083106.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29297999 29315112 - MGP_BALBcJ_P0083106 Mag protein_coding protein_coding MGP_BALBcJ_T0083107.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29298006 29314610 - MGP_BALBcJ_P0083107 Mag protein_coding protein_coding MGP_BALBcJ_T0083108.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29298354 29314591 - MGP_BALBcJ_P0083108 Mag protein_coding protein_coding MGP_BALBcJ_T0083109.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29298409 29314591 - MGP_BALBcJ_P0083109 Mag protein_coding protein_coding MGP_BALBcJ_T0083110.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29305866 29315153 - Mag protein_coding retained_intron MGP_BALBcJ_T0083111.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29308502 29315145 - MGP_BALBcJ_P0083111 Mag protein_coding protein_coding MGP_BALBcJ_T0083112.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29311915 29315104 - MGP_BALBcJ_P0083112 Mag protein_coding protein_coding MGP_BALBcJ_T0083113.1 MGP_BALBcJ_G0032034.1 mouse_genomes_project 7 29312292 29315125 - Mag protein_coding processed_transcript MGP_BALBcJ_T0081513.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3243778 3257496 + MGP_BALBcJ_P0081513 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081514.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3244034 3264031 + MGP_BALBcJ_P0081514 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081515.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3244054 3264951 + MGP_BALBcJ_P0081515 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081516.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3244065 3264030 + MGP_BALBcJ_P0081516 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081517.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3245552 3257368 + MGP_BALBcJ_P0081517 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081518.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3245725 3257976 + Zfp444 protein_coding processed_transcript MGP_BALBcJ_T0081519.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3245780 3263455 + MGP_BALBcJ_P0081519 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081520.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3255000 3261767 + MGP_BALBcJ_P0081520 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0081521.1 MGP_BALBcJ_G0031577.1 mouse_genomes_project 7 3257120 3261842 + MGP_BALBcJ_P0081521 Zfp444 protein_coding protein_coding MGP_BALBcJ_T0101348.1 MGP_BALBcJ_G0039384.1 mouse_genomes_project 7 106712401 106712537 + Gm22372 snoRNA snoRNA MGP_BALBcJ_T0010867.1 MGP_BALBcJ_G0008992.1 mouse_genomes_project 7 61258582 61258652 - Gm23873 miRNA miRNA MGP_BALBcJ_T0083488.1 MGP_BALBcJ_G0032117.1 mouse_genomes_project 7 42704828 42713697 + MGP_BALBcJ_P0083488 Vsig10l protein_coding protein_coding MGP_BALBcJ_T0083489.1 MGP_BALBcJ_G0032117.1 mouse_genomes_project 7 42704910 42712722 + MGP_BALBcJ_P0083489 Vsig10l protein_coding protein_coding MGP_BALBcJ_T0083490.1 MGP_BALBcJ_G0032117.1 mouse_genomes_project 7 42706354 42707011 + Vsig10l protein_coding retained_intron MGP_BALBcJ_T0083491.1 MGP_BALBcJ_G0032117.1 mouse_genomes_project 7 42707391 42709356 + Vsig10l protein_coding processed_transcript MGP_BALBcJ_T0083492.1 MGP_BALBcJ_G0032117.1 mouse_genomes_project 7 42709292 42712677 + MGP_BALBcJ_P0083492 Vsig10l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085926.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111157709 111158877 - Rnf141 protein_coding retained_intron MGP_BALBcJ_T0085927.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111157891 111178602 - MGP_BALBcJ_P0085927 Rnf141 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0085928.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111170805 111201667 - MGP_BALBcJ_P0085928 Rnf141 protein_coding protein_coding MGP_BALBcJ_T0085929.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111172858 111201611 - MGP_BALBcJ_P0085929 Rnf141 protein_coding protein_coding MGP_BALBcJ_T0085930.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111173731 111178548 - MGP_BALBcJ_P0085930 Rnf141 protein_coding protein_coding MGP_BALBcJ_T0085931.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111173867 111178873 - Rnf141 protein_coding retained_intron MGP_BALBcJ_T0085932.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111187917 111201663 - Rnf141 protein_coding processed_transcript MGP_BALBcJ_T0085933.1 MGP_BALBcJ_G0032848.1 mouse_genomes_project 7 111191024 111201418 - MGP_BALBcJ_P0085933 Rnf141 protein_coding protein_coding MGP_BALBcJ_T0087545.1 MGP_BALBcJ_G0033198.1 mouse_genomes_project 7 141925500 141932266 + Lrrc56 protein_coding retained_intron MGP_BALBcJ_T0087546.1 MGP_BALBcJ_G0033198.1 mouse_genomes_project 7 141926464 141929605 + Lrrc56 protein_coding processed_transcript MGP_BALBcJ_T0087547.1 MGP_BALBcJ_G0033198.1 mouse_genomes_project 7 141928255 141931163 + Lrrc56 protein_coding processed_transcript MGP_BALBcJ_T0087548.1 MGP_BALBcJ_G0033198.1 mouse_genomes_project 7 141928314 141941058 + MGP_BALBcJ_P0087548 Lrrc56 protein_coding protein_coding MGP_BALBcJ_T0081697.1 MGP_BALBcJ_G0031652.1 mouse_genomes_project 7 10753716 10764420 + MGP_BALBcJ_P0081697 Cabp5 protein_coding protein_coding MGP_BALBcJ_T0081698.1 MGP_BALBcJ_G0031652.1 mouse_genomes_project 7 10753879 10761861 + MGP_BALBcJ_P0081698 Cabp5 protein_coding protein_coding MGP_BALBcJ_T0081699.1 MGP_BALBcJ_G0031652.1 mouse_genomes_project 7 10753892 10761112 + MGP_BALBcJ_P0081699 Cabp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081208.1 MGP_BALBcJ_G0031502.1 mouse_genomes_project 7 334679 346478 + MGP_BALBcJ_P0081208 Cacng6 protein_coding protein_coding MGP_BALBcJ_T0081209.1 MGP_BALBcJ_G0031502.1 mouse_genomes_project 7 335146 345972 + MGP_BALBcJ_P0081209 Cacng6 protein_coding protein_coding MGP_BALBcJ_T0082061.1 MGP_BALBcJ_G0031770.1 mouse_genomes_project 7 17527784 17531889 - MGP_BALBcJ_P0082061 Gm44805 protein_coding protein_coding MGP_BALBcJ_T0082062.1 MGP_BALBcJ_G0031770.1 mouse_genomes_project 7 17527789 17528961 - MGP_BALBcJ_P0082062 Gm44805 protein_coding protein_coding MGP_BALBcJ_T0082063.1 MGP_BALBcJ_G0031770.1 mouse_genomes_project 7 17527789 17536433 - MGP_BALBcJ_P0082063 Gm44805 protein_coding protein_coding MGP_BALBcJ_T0082064.1 MGP_BALBcJ_G0031770.1 mouse_genomes_project 7 17527789 17532966 - MGP_BALBcJ_P0082064 Gm44805 protein_coding protein_coding MGP_BALBcJ_T0082065.1 MGP_BALBcJ_G0031770.1 mouse_genomes_project 7 17528269 17536446 - MGP_BALBcJ_P0082065 Gm44805 protein_coding protein_coding MGP_BALBcJ_T0085482.1 MGP_BALBcJ_G0032604.1 mouse_genomes_project 7 102662414 102663368 + MGP_BALBcJ_P0085482 Olfr552 protein_coding protein_coding MGP_BALBcJ_T0081734.1 MGP_BALBcJ_G0031672.1 mouse_genomes_project 7 13472793 13477828 - MGP_BALBcJ_P0081734 protein_coding protein_coding MGP_BALBcJ_T0082086.1 MGP_BALBcJ_G0031776.1 mouse_genomes_project 7 17613670 17628505 - MGP_BALBcJ_P0082086 Bcam protein_coding protein_coding MGP_BALBcJ_T0082087.1 MGP_BALBcJ_G0031776.1 mouse_genomes_project 7 17614096 17614491 - Bcam protein_coding retained_intron MGP_BALBcJ_T0082088.1 MGP_BALBcJ_G0031776.1 mouse_genomes_project 7 17620680 17628453 - Bcam protein_coding retained_intron MGP_BALBcJ_T0082089.1 MGP_BALBcJ_G0031776.1 mouse_genomes_project 7 17623517 17628974 - MGP_BALBcJ_P0082089 Bcam protein_coding protein_coding MGP_BALBcJ_T0082090.1 MGP_BALBcJ_G0031776.1 mouse_genomes_project 7 17624891 17628453 - MGP_BALBcJ_P0082090 Bcam protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010849.1 MGP_BALBcJ_G0008974.1 mouse_genomes_project 7 44498111 44498185 - Mir5121 miRNA miRNA MGP_BALBcJ_T0086224.1 MGP_BALBcJ_G0032908.1 mouse_genomes_project 7 120315148 120358565 - MGP_BALBcJ_P0086224 Dcun1d3 protein_coding protein_coding MGP_BALBcJ_T0086225.1 MGP_BALBcJ_G0032908.1 mouse_genomes_project 7 120317800 120358363 - MGP_BALBcJ_P0086225 Dcun1d3 protein_coding protein_coding MGP_BALBcJ_T0086226.1 MGP_BALBcJ_G0032908.1 mouse_genomes_project 7 120319312 120359111 - MGP_BALBcJ_P0086226 Dcun1d3 protein_coding protein_coding MGP_BALBcJ_T0086227.1 MGP_BALBcJ_G0032908.1 mouse_genomes_project 7 120319979 120323819 - MGP_BALBcJ_P0086227 Dcun1d3 protein_coding protein_coding MGP_BALBcJ_T0086228.1 MGP_BALBcJ_G0032908.1 mouse_genomes_project 7 120321607 120323791 - MGP_BALBcJ_P0086228 Dcun1d3 protein_coding protein_coding MGP_BALBcJ_T0087953.1 MGP_BALBcJ_G0033274.1 mouse_genomes_project 7 145627922 145632559 + MGP_BALBcJ_P0087953 Fgf3 protein_coding protein_coding MGP_BALBcJ_T0087954.1 MGP_BALBcJ_G0033274.1 mouse_genomes_project 7 145628434 145634276 + MGP_BALBcJ_P0087954 Fgf3 protein_coding protein_coding MGP_BALBcJ_T0082041.1 MGP_BALBcJ_G0031763.1 mouse_genomes_project 7 17371904 17379361 + MGP_BALBcJ_P0082041 Nkpd1 protein_coding protein_coding MGP_BALBcJ_T0085795.1 MGP_BALBcJ_G0032786.1 mouse_genomes_project 7 108032220 108041798 - MGP_BALBcJ_P0085795 Cyb5r2 protein_coding protein_coding MGP_BALBcJ_T0085796.1 MGP_BALBcJ_G0032786.1 mouse_genomes_project 7 108033989 108041028 - MGP_BALBcJ_P0085796 Cyb5r2 protein_coding unknown_likely_coding MGP_BALBcJ_T0002241.1 MGP_BALBcJ_G0002153.1 mouse_genomes_project 7 64096573 64097174 + TEC TEC MGP_BALBcJ_T0087001.1 MGP_BALBcJ_G0033055.1 mouse_genomes_project 7 128567498 128633501 + MGP_BALBcJ_P0087001 Itgam protein_coding protein_coding MGP_BALBcJ_T0087005.1 MGP_BALBcJ_G0033055.1 mouse_genomes_project 7 128625051 128632555 + MGP_BALBcJ_P0087005 Itgam protein_coding protein_coding MGP_BALBcJ_T0084093.1 MGP_BALBcJ_G0032285.1 mouse_genomes_project 7 48347830 48361997 + Zdhhc13 protein_coding processed_transcript MGP_BALBcJ_T0084094.1 MGP_BALBcJ_G0032285.1 mouse_genomes_project 7 48347909 48386521 + MGP_BALBcJ_P0084094 Zdhhc13 protein_coding protein_coding MGP_BALBcJ_T0083209.1 MGP_BALBcJ_G0032049.1 mouse_genomes_project 7 29727084 29728387 - MGP_BALBcJ_P0083209 Scgb1b2 protein_coding protein_coding MGP_BALBcJ_T0008983.1 MGP_BALBcJ_G0007234.1 mouse_genomes_project 7 121136221 121140303 - 9030407P20Rik lincRNA lincRNA MGP_BALBcJ_T0008984.1 MGP_BALBcJ_G0007234.1 mouse_genomes_project 7 121136517 121140343 - 9030407P20Rik lincRNA lincRNA MGP_BALBcJ_T0015835.1 MGP_BALBcJ_G0013932.1 mouse_genomes_project 7 88454894 88455874 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0087430.1 MGP_BALBcJ_G0033150.1 mouse_genomes_project 7 140834893 140839142 - MGP_BALBcJ_P0087430 Sprn protein_coding protein_coding MGP_BALBcJ_T0087431.1 MGP_BALBcJ_G0033150.1 mouse_genomes_project 7 140835229 140837807 - Sprn protein_coding processed_transcript MGP_BALBcJ_T0015709.1 MGP_BALBcJ_G0013806.1 mouse_genomes_project 7 14675146 14675611 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084907.1 MGP_BALBcJ_G0032458.1 mouse_genomes_project 7 86135719 86142980 - MGP_BALBcJ_P0084907 Olfr309 protein_coding protein_coding MGP_BALBcJ_T0084908.1 MGP_BALBcJ_G0032458.1 mouse_genomes_project 7 86135719 86136646 - MGP_BALBcJ_P0084908 Olfr309 protein_coding protein_coding MGP_BALBcJ_T0086930.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128317959 128343671 + Stx4a protein_coding processed_transcript MGP_BALBcJ_T0086931.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128336600 128343671 + MGP_BALBcJ_P0086931 Stx4a protein_coding protein_coding MGP_BALBcJ_T0086932.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128336804 128343652 + MGP_BALBcJ_P0086932 Stx4a protein_coding protein_coding MGP_BALBcJ_T0086933.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128336806 128338781 + Stx4a protein_coding retained_intron MGP_BALBcJ_T0086934.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128336814 128341455 + MGP_BALBcJ_P0086934 Stx4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0086935.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128337521 128341423 + Stx4a protein_coding retained_intron MGP_BALBcJ_T0086936.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128338434 128343330 + Stx4a protein_coding retained_intron MGP_BALBcJ_T0086937.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128340620 128343151 + Stx4a protein_coding retained_intron MGP_BALBcJ_T0086938.1 MGP_BALBcJ_G0033041.1 mouse_genomes_project 7 128343043 128343671 + Stx4a protein_coding retained_intron MGP_BALBcJ_T0087449.1 MGP_BALBcJ_G0033166.1 mouse_genomes_project 7 141315342 141316301 + MGP_BALBcJ_P0087449 protein_coding protein_coding MGP_BALBcJ_T0101358.1 MGP_BALBcJ_G0039394.1 mouse_genomes_project 7 119291977 119292091 + Gm26147 snoRNA snoRNA MGP_BALBcJ_T0015721.1 MGP_BALBcJ_G0013818.1 mouse_genomes_project 7 22326706 22329484 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084801.1 MGP_BALBcJ_G0032420.1 mouse_genomes_project 7 81205446 81210343 - Ap3b2 protein_coding retained_intron MGP_BALBcJ_T0084802.1 MGP_BALBcJ_G0032420.1 mouse_genomes_project 7 81205448 81239005 - MGP_BALBcJ_P0084802 Ap3b2 protein_coding protein_coding MGP_BALBcJ_T0084803.1 MGP_BALBcJ_G0032420.1 mouse_genomes_project 7 81219433 81238786 - Ap3b2 protein_coding retained_intron MGP_BALBcJ_T0084804.1 MGP_BALBcJ_G0032420.1 mouse_genomes_project 7 81222180 81223468 - Ap3b2 protein_coding processed_transcript MGP_BALBcJ_T0084805.1 MGP_BALBcJ_G0032420.1 mouse_genomes_project 7 81224710 81238863 - MGP_BALBcJ_P0084805 Ap3b2 protein_coding protein_coding MGP_BALBcJ_T0102720.1 MGP_BALBcJ_G0040535.1 mouse_genomes_project 7 24138032 24151896 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087056.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128960544 128982289 - MGP_BALBcJ_P0087056 Tial1 protein_coding protein_coding MGP_BALBcJ_T0087057.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128960992 128982269 - Tial1 protein_coding retained_intron MGP_BALBcJ_T0087058.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128962161 128982290 - MGP_BALBcJ_P0087058 Tial1 protein_coding protein_coding MGP_BALBcJ_T0087059.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128962553 128981940 - MGP_BALBcJ_P0087059 Tial1 protein_coding protein_coding MGP_BALBcJ_T0087060.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128962967 128965664 - MGP_BALBcJ_P0087060 Tial1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087061.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128963038 128981826 - MGP_BALBcJ_P0087061 Tial1 protein_coding protein_coding MGP_BALBcJ_T0087062.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128963038 128981972 - MGP_BALBcJ_P0087062 Tial1 protein_coding protein_coding MGP_BALBcJ_T0087063.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128963038 128982334 - MGP_BALBcJ_P0087063 Tial1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087064.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128963069 128981963 - MGP_BALBcJ_P0087064 Tial1 protein_coding protein_coding MGP_BALBcJ_T0087065.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128964572 128969105 - MGP_BALBcJ_P0087065 Tial1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087066.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128965047 128966464 - Tial1 protein_coding retained_intron MGP_BALBcJ_T0087067.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128965570 128975759 - MGP_BALBcJ_P0087067 Tial1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087068.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128967521 128969329 - Tial1 protein_coding retained_intron MGP_BALBcJ_T0087069.1 MGP_BALBcJ_G0033066.1 mouse_genomes_project 7 128968606 128969637 - Tial1 protein_coding retained_intron MGP_BALBcJ_T0008928.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81271381 81277416 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008929.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81271394 81278008 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008930.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81271402 81277300 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008931.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81271402 81279350 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008932.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81271437 81277102 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008933.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81276260 81277373 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008934.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81276637 81277452 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0008935.1 MGP_BALBcJ_G0007203.1 mouse_genomes_project 7 81276652 81279354 + 2900076A07Rik lincRNA lincRNA MGP_BALBcJ_T0085518.1 MGP_BALBcJ_G0032637.1 mouse_genomes_project 7 103431454 103432393 + MGP_BALBcJ_P0085518 Olfr603 protein_coding protein_coding MGP_BALBcJ_T0008791.1 MGP_BALBcJ_G0007098.1 mouse_genomes_project 7 17628568 17633361 + Gm26600 lincRNA lincRNA MGP_BALBcJ_T0082067.1 MGP_BALBcJ_G0031772.1 mouse_genomes_project 7 17544231 17547858 - MGP_BALBcJ_P0082067 Apoc1 protein_coding protein_coding MGP_BALBcJ_T0082068.1 MGP_BALBcJ_G0031772.1 mouse_genomes_project 7 17544231 17547920 - MGP_BALBcJ_P0082068 Apoc1 protein_coding protein_coding MGP_BALBcJ_T0086771.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127690758 127701618 - MGP_BALBcJ_P0086771 Tbc1d10b protein_coding protein_coding MGP_BALBcJ_T0086772.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127692021 127697048 - MGP_BALBcJ_P0086772 Tbc1d10b protein_coding protein_coding MGP_BALBcJ_T0086773.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127692356 127693285 - Tbc1d10b protein_coding retained_intron MGP_BALBcJ_T0086774.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127692661 127700897 - Tbc1d10b protein_coding processed_transcript MGP_BALBcJ_T0086775.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127693121 127694254 - Tbc1d10b protein_coding retained_intron MGP_BALBcJ_T0086776.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127693166 127696948 - Tbc1d10b protein_coding retained_intron MGP_BALBcJ_T0086777.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127693552 127696989 - Tbc1d10b protein_coding retained_intron MGP_BALBcJ_T0086778.1 MGP_BALBcJ_G0033012.1 mouse_genomes_project 7 127696247 127696769 - Tbc1d10b protein_coding retained_intron MGP_BALBcJ_T0098394.1 MGP_BALBcJ_G0036448.1 mouse_genomes_project 7 113337083 113338510 + pseudogene pseudogene MGP_BALBcJ_T0081553.1 MGP_BALBcJ_G0031592.1 mouse_genomes_project 7 3600327 3601807 - MGP_BALBcJ_P0081553 Olfr1348 protein_coding protein_coding MGP_BALBcJ_T0087525.1 MGP_BALBcJ_G0033193.1 mouse_genomes_project 7 141820975 141830349 - MGP_BALBcJ_P0087525 Sigirr protein_coding protein_coding MGP_BALBcJ_T0085898.1 MGP_BALBcJ_G0032842.1 mouse_genomes_project 7 110408168 110441939 + MGP_BALBcJ_P0085898 Zfp143 protein_coding protein_coding MGP_BALBcJ_T0085899.1 MGP_BALBcJ_G0032842.1 mouse_genomes_project 7 110408176 110441934 + MGP_BALBcJ_P0085899 Zfp143 protein_coding protein_coding MGP_BALBcJ_T0082035.1 MGP_BALBcJ_G0031762.1 mouse_genomes_project 7 17361007 17368931 + MGP_BALBcJ_P0082035 Trappc6a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082036.1 MGP_BALBcJ_G0031762.1 mouse_genomes_project 7 17361047 17368938 + MGP_BALBcJ_P0082036 Trappc6a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082037.1 MGP_BALBcJ_G0031762.1 mouse_genomes_project 7 17361049 17368938 + MGP_BALBcJ_P0082037 Trappc6a protein_coding protein_coding MGP_BALBcJ_T0082038.1 MGP_BALBcJ_G0031762.1 mouse_genomes_project 7 17361063 17368934 + MGP_BALBcJ_P0082038 Trappc6a protein_coding protein_coding MGP_BALBcJ_T0082039.1 MGP_BALBcJ_G0031762.1 mouse_genomes_project 7 17361067 17368111 + Trappc6a protein_coding retained_intron MGP_BALBcJ_T0082040.1 MGP_BALBcJ_G0031762.1 mouse_genomes_project 7 17367212 17368929 + MGP_BALBcJ_P0082040 Trappc6a protein_coding protein_coding MGP_BALBcJ_T0102829.1 MGP_BALBcJ_G0040644.1 mouse_genomes_project 7 105952496 106918681 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102784.1 MGP_BALBcJ_G0040599.1 mouse_genomes_project 7 85025915 85027367 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0087050.1 MGP_BALBcJ_G0033065.1 mouse_genomes_project 7 128893170 128937639 - MGP_BALBcJ_P0087050 Rgs10 protein_coding protein_coding MGP_BALBcJ_T0087051.1 MGP_BALBcJ_G0033065.1 mouse_genomes_project 7 128893434 128913050 - Rgs10 protein_coding processed_transcript MGP_BALBcJ_T0087052.1 MGP_BALBcJ_G0033065.1 mouse_genomes_project 7 128893550 128896118 - Rgs10 protein_coding processed_transcript MGP_BALBcJ_T0087053.1 MGP_BALBcJ_G0033065.1 mouse_genomes_project 7 128908159 128923826 - Rgs10 protein_coding retained_intron MGP_BALBcJ_T0087054.1 MGP_BALBcJ_G0033065.1 mouse_genomes_project 7 128922257 128937629 - MGP_BALBcJ_P0087054 Rgs10 protein_coding protein_coding MGP_BALBcJ_T0087055.1 MGP_BALBcJ_G0033065.1 mouse_genomes_project 7 128922528 128938224 - MGP_BALBcJ_P0087055 Rgs10 protein_coding protein_coding MGP_BALBcJ_T0085934.1 MGP_BALBcJ_G0032849.1 mouse_genomes_project 7 111207885 111220219 - MGP_BALBcJ_P0085934 Lyve1 protein_coding protein_coding MGP_BALBcJ_T0086633.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127282911 127286933 - MGP_BALBcJ_P0086633 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086634.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127282912 127288122 - MGP_BALBcJ_P0086634 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086635.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127282913 127286820 - MGP_BALBcJ_P0086635 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086636.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127283589 127285961 - Aldoa protein_coding processed_transcript MGP_BALBcJ_T0086637.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127283626 127285986 - Aldoa protein_coding retained_intron MGP_BALBcJ_T0086638.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127283626 127285430 - Aldoa protein_coding retained_intron MGP_BALBcJ_T0086639.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127283716 127287721 - MGP_BALBcJ_P0086639 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086640.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127283948 127286672 - MGP_BALBcJ_P0086640 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086641.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127284159 127286849 - Aldoa protein_coding retained_intron MGP_BALBcJ_T0086642.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127284345 127286788 - MGP_BALBcJ_P0086642 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086643.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127284395 127287711 - MGP_BALBcJ_P0086643 Aldoa protein_coding protein_coding MGP_BALBcJ_T0086644.1 MGP_BALBcJ_G0032988.1 mouse_genomes_project 7 127284517 127288427 - MGP_BALBcJ_P0086644 Aldoa protein_coding protein_coding MGP_BALBcJ_T0015767.1 MGP_BALBcJ_G0013864.1 mouse_genomes_project 7 40761966 40763568 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102675.1 MGP_BALBcJ_G0040490.1 mouse_genomes_project 7 7633787 7637578 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102721.1 MGP_BALBcJ_G0040536.1 mouse_genomes_project 7 24900403 24908352 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0084473.1 MGP_BALBcJ_G0032364.1 mouse_genomes_project 7 74781332 74873561 - MGP_BALBcJ_P0084473 protein_coding unknown_likely_coding MGP_BALBcJ_T0084474.1 MGP_BALBcJ_G0032364.1 mouse_genomes_project 7 74786389 74815272 - MGP_BALBcJ_P0084474 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0084475.1 MGP_BALBcJ_G0032364.1 mouse_genomes_project 7 74824143 74828806 - protein_coding processed_transcript MGP_BALBcJ_T0084476.1 MGP_BALBcJ_G0032364.1 mouse_genomes_project 7 74824143 74828795 - protein_coding processed_transcript MGP_BALBcJ_T0084477.1 MGP_BALBcJ_G0032364.1 mouse_genomes_project 7 74869128 74974318 - protein_coding retained_intron MGP_BALBcJ_T0081648.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10386954 10393843 + MGP_BALBcJ_P0081648 Trim28 protein_coding protein_coding MGP_BALBcJ_T0081649.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10390423 10391932 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081650.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10390635 10391310 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081651.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10390827 10392407 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081652.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10391212 10392173 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081653.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10391687 10392734 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081654.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10391898 10392803 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081655.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10392511 10393155 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0081656.1 MGP_BALBcJ_G0031640.1 mouse_genomes_project 7 10393179 10393840 + Trim28 protein_coding retained_intron MGP_BALBcJ_T0010843.1 MGP_BALBcJ_G0008968.1 mouse_genomes_project 7 42699174 42699247 + Mir7051 miRNA miRNA MGP_BALBcJ_T0087387.1 MGP_BALBcJ_G0033139.1 mouse_genomes_project 7 140669088 140675670 - 6430531B16Rik protein_coding retained_intron MGP_BALBcJ_T0087388.1 MGP_BALBcJ_G0033139.1 mouse_genomes_project 7 140669088 140675702 - MGP_BALBcJ_P0087388 6430531B16Rik protein_coding protein_coding MGP_BALBcJ_T0087389.1 MGP_BALBcJ_G0033139.1 mouse_genomes_project 7 140672442 140675670 - MGP_BALBcJ_P0087389 6430531B16Rik protein_coding protein_coding MGP_BALBcJ_T0005286.1 MGP_BALBcJ_G0004485.1 mouse_genomes_project 7 141547976 141556535 - C330022C24Rik antisense antisense MGP_BALBcJ_T0083448.1 MGP_BALBcJ_G0032104.1 mouse_genomes_project 7 41488559 41539911 + MGP_BALBcJ_P0083448 Vmn2r61 protein_coding protein_coding MGP_BALBcJ_T0083449.1 MGP_BALBcJ_G0032104.1 mouse_genomes_project 7 41494501 41508793 + Vmn2r61 protein_coding processed_transcript MGP_BALBcJ_T0082154.1 MGP_BALBcJ_G0031804.1 mouse_genomes_project 7 22223448 22236301 - MGP_BALBcJ_P0082154 protein_coding protein_coding MGP_BALBcJ_T0082207.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22569716 22596876 + MGP_BALBcJ_P0082207 Xrcc1 protein_coding protein_coding MGP_BALBcJ_T0082208.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22570577 22596879 + MGP_BALBcJ_P0082208 Xrcc1 protein_coding protein_coding MGP_BALBcJ_T0082209.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22570625 22584125 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082210.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22570628 22575686 + Xrcc1 protein_coding processed_transcript MGP_BALBcJ_T0082211.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22570712 22571969 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082212.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22570760 22590380 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082213.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22589009 22590981 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082214.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22590802 22594133 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082215.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22593142 22594151 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082216.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22593297 22594367 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082217.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22593970 22596881 + Xrcc1 protein_coding processed_transcript MGP_BALBcJ_T0082218.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22595154 22596875 + Xrcc1 protein_coding retained_intron MGP_BALBcJ_T0082219.1 MGP_BALBcJ_G0031819.1 mouse_genomes_project 7 22595666 22596875 + Xrcc1 protein_coding processed_transcript MGP_BALBcJ_T0100109.1 MGP_BALBcJ_G0038145.1 mouse_genomes_project 7 141912496 141912592 - Gm22019 snRNA snRNA MGP_BALBcJ_T0081592.1 MGP_BALBcJ_G0031619.1 mouse_genomes_project 7 9542967 9543894 + MGP_BALBcJ_P0081592 Vmn1r80 protein_coding protein_coding MGP_BALBcJ_T0084974.1 MGP_BALBcJ_G0032489.1 mouse_genomes_project 7 90057495 90102422 - MGP_BALBcJ_P0084974 Ccdc83 protein_coding protein_coding MGP_BALBcJ_T0084975.1 MGP_BALBcJ_G0032489.1 mouse_genomes_project 7 90068238 90102422 - MGP_BALBcJ_P0084975 Ccdc83 protein_coding protein_coding MGP_BALBcJ_T0084976.1 MGP_BALBcJ_G0032489.1 mouse_genomes_project 7 90069591 90102422 - MGP_BALBcJ_P0084976 Ccdc83 protein_coding protein_coding MGP_BALBcJ_T0101324.1 MGP_BALBcJ_G0039360.1 mouse_genomes_project 7 58878046 58878115 - Gm25499 snoRNA snoRNA MGP_BALBcJ_T0086246.1 MGP_BALBcJ_G0032916.1 mouse_genomes_project 7 120796957 120830138 + Abca15 protein_coding retained_intron MGP_BALBcJ_T0086247.1 MGP_BALBcJ_G0032916.1 mouse_genomes_project 7 120796957 120878821 + MGP_BALBcJ_P0086247 Abca15 protein_coding protein_coding MGP_BALBcJ_T0086248.1 MGP_BALBcJ_G0032916.1 mouse_genomes_project 7 120796957 120878821 + MGP_BALBcJ_P0086248 Abca15 protein_coding protein_coding MGP_BALBcJ_T0101311.1 MGP_BALBcJ_G0039347.1 mouse_genomes_project 7 33961602 33961728 + Gm24505 snoRNA snoRNA MGP_BALBcJ_T0087455.1 MGP_BALBcJ_G0033172.1 mouse_genomes_project 7 141472706 141483943 + MGP_BALBcJ_P0087455 Cyp2e1 protein_coding protein_coding MGP_BALBcJ_T0010891.1 MGP_BALBcJ_G0009016.1 mouse_genomes_project 7 101470324 101470392 + Mir139 miRNA miRNA MGP_BALBcJ_T0005132.1 MGP_BALBcJ_G0004375.1 mouse_genomes_project 7 16825558 16833286 - Mypopos antisense antisense MGP_BALBcJ_T0005133.1 MGP_BALBcJ_G0004375.1 mouse_genomes_project 7 16825877 16833313 - Mypopos antisense antisense MGP_BALBcJ_T0005134.1 MGP_BALBcJ_G0004375.1 mouse_genomes_project 7 16827070 16829385 - Mypopos antisense antisense MGP_BALBcJ_T0005135.1 MGP_BALBcJ_G0004375.1 mouse_genomes_project 7 16829413 16833297 - Mypopos antisense antisense MGP_BALBcJ_T0086898.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128237234 128242881 + MGP_BALBcJ_P0086898 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0086899.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128237894 128262330 + MGP_BALBcJ_P0086899 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0086900.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128238463 128242884 + MGP_BALBcJ_P0086900 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0086901.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128238479 128262879 + MGP_BALBcJ_P0086901 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0086902.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128239941 128262331 + MGP_BALBcJ_P0086902 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0086903.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128241313 128262130 + MGP_BALBcJ_P0086903 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0086904.1 MGP_BALBcJ_G0033035.1 mouse_genomes_project 7 128241440 128262886 + MGP_BALBcJ_P0086904 Fbxl19 protein_coding protein_coding MGP_BALBcJ_T0082617.1 MGP_BALBcJ_G0031921.1 mouse_genomes_project 7 26565509 26572394 - MGP_BALBcJ_P0082617 protein_coding protein_coding MGP_BALBcJ_T0082618.1 MGP_BALBcJ_G0031921.1 mouse_genomes_project 7 26565509 26572446 - MGP_BALBcJ_P0082618 protein_coding protein_coding MGP_BALBcJ_T0082619.1 MGP_BALBcJ_G0031921.1 mouse_genomes_project 7 26568317 26569440 - MGP_BALBcJ_P0082619 protein_coding protein_coding MGP_BALBcJ_T0018396.1 MGP_BALBcJ_G0015639.1 mouse_genomes_project 7 142203946 142207997 - Gm10575 processed_transcript processed_transcript MGP_BALBcJ_T0018397.1 MGP_BALBcJ_G0015639.1 mouse_genomes_project 7 142203948 142210260 - Gm10575 processed_transcript processed_transcript MGP_BALBcJ_T0018398.1 MGP_BALBcJ_G0015639.1 mouse_genomes_project 7 142204385 142206361 - Gm10575 processed_transcript processed_transcript MGP_BALBcJ_T0008900.1 MGP_BALBcJ_G0007185.1 mouse_genomes_project 7 73259377 73266838 + Gm44737 lincRNA lincRNA MGP_BALBcJ_T0081340.1 MGP_BALBcJ_G0031526.1 mouse_genomes_project 7 1413210 1436481 - MGP_BALBcJ_P0081340 Rdh13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0081341.1 MGP_BALBcJ_G0031526.1 mouse_genomes_project 7 1414107 1436529 - MGP_BALBcJ_P0081341 Rdh13 protein_coding protein_coding MGP_BALBcJ_T0081342.1 MGP_BALBcJ_G0031526.1 mouse_genomes_project 7 1425927 1436061 - MGP_BALBcJ_P0081342 Rdh13 protein_coding protein_coding MGP_BALBcJ_T0081343.1 MGP_BALBcJ_G0031526.1 mouse_genomes_project 7 1431287 1436473 - Rdh13 protein_coding retained_intron MGP_BALBcJ_T0081344.1 MGP_BALBcJ_G0031526.1 mouse_genomes_project 7 1433531 1436522 - Rdh13 protein_coding processed_transcript MGP_BALBcJ_T0081345.1 MGP_BALBcJ_G0031526.1 mouse_genomes_project 7 1435082 1436506 - Rdh13 protein_coding processed_transcript MGP_BALBcJ_T0081965.1 MGP_BALBcJ_G0031742.1 mouse_genomes_project 7 16973718 16983260 - MGP_BALBcJ_P0081965 Qpctl protein_coding protein_coding MGP_BALBcJ_T0081966.1 MGP_BALBcJ_G0031742.1 mouse_genomes_project 7 16977574 16981497 - Qpctl protein_coding retained_intron MGP_BALBcJ_T0085008.1 MGP_BALBcJ_G0032496.1 mouse_genomes_project 7 92412770 92416341 + Ccdc90b protein_coding processed_transcript MGP_BALBcJ_T0085009.1 MGP_BALBcJ_G0032496.1 mouse_genomes_project 7 92412770 92437308 + MGP_BALBcJ_P0085009 Ccdc90b protein_coding protein_coding MGP_BALBcJ_T0085010.1 MGP_BALBcJ_G0032496.1 mouse_genomes_project 7 92412770 92437308 + MGP_BALBcJ_P0085010 Ccdc90b protein_coding protein_coding MGP_BALBcJ_T0085557.1 MGP_BALBcJ_G0032673.1 mouse_genomes_project 7 104085313 104086273 + MGP_BALBcJ_P0085557 Olfr631 protein_coding protein_coding MGP_BALBcJ_T0018301.1 MGP_BALBcJ_G0015600.1 mouse_genomes_project 7 27943205 27947195 - A330087D11Rik processed_transcript processed_transcript MGP_BALBcJ_T0085517.1 MGP_BALBcJ_G0032636.1 mouse_genomes_project 7 103324749 103325685 + MGP_BALBcJ_P0085517 Olfr594 protein_coding protein_coding MGP_BALBcJ_T0100086.1 MGP_BALBcJ_G0038122.1 mouse_genomes_project 7 108425134 108425192 - Gm25424 snRNA snRNA MGP_BALBcJ_T0008822.1 MGP_BALBcJ_G0007126.1 mouse_genomes_project 7 35907348 35915968 - Gm28078 lincRNA lincRNA MGP_BALBcJ_T0083250.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 32965297 33014568 - MGP_BALBcJ_P0083250 4931406P16Rik protein_coding protein_coding MGP_BALBcJ_T0083251.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 32965489 32973284 - MGP_BALBcJ_P0083251 4931406P16Rik protein_coding protein_coding MGP_BALBcJ_T0083252.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 32966490 32973095 - 4931406P16Rik protein_coding retained_intron MGP_BALBcJ_T0083254.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 32983295 32986471 - 4931406P16Rik protein_coding retained_intron MGP_BALBcJ_T0083255.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 33013329 33044195 - 4931406P16Rik protein_coding retained_intron MGP_BALBcJ_T0083256.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 33014848 33044190 - 4931406P16Rik protein_coding processed_transcript MGP_BALBcJ_T0083257.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 33014934 33036158 - 4931406P16Rik protein_coding processed_transcript MGP_BALBcJ_T0083258.1 MGP_BALBcJ_G0032062.1 mouse_genomes_project 7 33042711 33044153 - 4931406P16Rik protein_coding processed_transcript MGP_BALBcJ_T0087319.1 MGP_BALBcJ_G0033124.1 mouse_genomes_project 7 138903189 139086561 - MGP_BALBcJ_P0087319 Tcerg1l protein_coding protein_coding MGP_BALBcJ_T0087320.1 MGP_BALBcJ_G0033124.1 mouse_genomes_project 7 138903932 138961256 - Tcerg1l protein_coding processed_transcript MGP_BALBcJ_T0087321.1 MGP_BALBcJ_G0033124.1 mouse_genomes_project 7 138953338 139086563 - Tcerg1l protein_coding retained_intron MGP_BALBcJ_T0101333.1 MGP_BALBcJ_G0039369.1 mouse_genomes_project 7 62177194 62177322 + Gm22494 snoRNA snoRNA MGP_BALBcJ_T0015904.1 MGP_BALBcJ_G0014001.1 mouse_genomes_project 7 136639213 136640199 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0085499.1 MGP_BALBcJ_G0032620.1 mouse_genomes_project 7 102982068 102983037 - MGP_BALBcJ_P0085499 Olfr571 protein_coding protein_coding MGP_BALBcJ_T0087444.1 MGP_BALBcJ_G0033161.1 mouse_genomes_project 7 141113337 141114267 - MGP_BALBcJ_P0087444 Olfr532 protein_coding protein_coding MGP_BALBcJ_T0005265.1 MGP_BALBcJ_G0004468.1 mouse_genomes_project 7 124451540 124464759 - Gm27040 antisense antisense MGP_BALBcJ_T0018293.1 MGP_BALBcJ_G0015594.1 mouse_genomes_project 7 22209041 22210293 + Gm44796 processed_transcript processed_transcript MGP_BALBcJ_T0082887.1 MGP_BALBcJ_G0031988.1 mouse_genomes_project 7 28570115 28571956 + MGP_BALBcJ_P0082887 Cox7a1 protein_coding protein_coding MGP_BALBcJ_T0015774.1 MGP_BALBcJ_G0013871.1 mouse_genomes_project 7 42634114 42634844 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0084223.1 MGP_BALBcJ_G0032312.1 mouse_genomes_project 7 58155770 58330971 + MGP_BALBcJ_P0084223 Atp10a protein_coding protein_coding MGP_BALBcJ_T0082748.1 MGP_BALBcJ_G0031953.1 mouse_genomes_project 7 27282449 27292848 - MGP_BALBcJ_P0082748 Eif3k protein_coding protein_coding MGP_BALBcJ_T0002254.1 MGP_BALBcJ_G0002165.1 mouse_genomes_project 7 73576600 73578800 - TEC TEC MGP_BALBcJ_T0015677.1 MGP_BALBcJ_G0013774.1 mouse_genomes_project 7 1614487 1615270 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010814.1 MGP_BALBcJ_G0008939.1 mouse_genomes_project 7 532651 532737 + Mir3572 miRNA miRNA MGP_BALBcJ_T0083762.1 MGP_BALBcJ_G0032192.1 mouse_genomes_project 7 44496758 44499939 - MGP_BALBcJ_P0083762 Rpl13a protein_coding protein_coding MGP_BALBcJ_T0010895.1 MGP_BALBcJ_G0009020.1 mouse_genomes_project 7 113094829 113094958 + Gm44462 miRNA miRNA MGP_BALBcJ_T0082238.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 22869639 23638052 - MGP_BALBcJ_P0082238 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082242.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 22870445 23638052 - MGP_BALBcJ_P0082242 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082353.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23600818 23638052 - Ceacam2 protein_coding retained_intron MGP_BALBcJ_T0082354.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23600818 23638052 - MGP_BALBcJ_P0082354 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082355.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23601158 23638052 - MGP_BALBcJ_P0082355 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082356.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23601158 23638052 - MGP_BALBcJ_P0082356 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082357.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23601158 23638052 - MGP_BALBcJ_P0082357 Ceacam2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0082358.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23601158 23638052 - MGP_BALBcJ_P0082358 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082360.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23601925 23638052 - MGP_BALBcJ_P0082360 Ceacam2 protein_coding protein_coding MGP_BALBcJ_T0082361.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23611397 23638053 - Ceacam2 protein_coding retained_intron MGP_BALBcJ_T0082362.1 MGP_BALBcJ_G0031829.1 mouse_genomes_project 7 23611398 23638052 - Ceacam2 protein_coding retained_intron MGP_BALBcJ_T0015841.1 MGP_BALBcJ_G0013938.1 mouse_genomes_project 7 95359351 95359717 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005171.1 MGP_BALBcJ_G0004404.1 mouse_genomes_project 7 32960738 32966576 + Gm12758 antisense antisense MGP_BALBcJ_T0005172.1 MGP_BALBcJ_G0004404.1 mouse_genomes_project 7 32960802 32961919 + Gm12758 antisense antisense MGP_BALBcJ_T0102695.1 MGP_BALBcJ_G0040510.1 mouse_genomes_project 7 10715625 10742280 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0081549.1 MGP_BALBcJ_G0031588.1 mouse_genomes_project 7 3560214 3561159 + MGP_BALBcJ_P0081549 Olfr1336 protein_coding protein_coding MGP_BALBcJ_T0087215.1 MGP_BALBcJ_G0033099.1 mouse_genomes_project 7 133430241 133455493 - MGP_BALBcJ_P0087215 Mettl10 protein_coding protein_coding MGP_BALBcJ_T0087216.1 MGP_BALBcJ_G0033099.1 mouse_genomes_project 7 133430393 133455436 - MGP_BALBcJ_P0087216 Mettl10 protein_coding protein_coding MGP_BALBcJ_T0087217.1 MGP_BALBcJ_G0033099.1 mouse_genomes_project 7 133430565 133455199 - Mettl10 protein_coding processed_transcript MGP_BALBcJ_T0087218.1 MGP_BALBcJ_G0033099.1 mouse_genomes_project 7 133434149 133455435 - MGP_BALBcJ_P0087218 Mettl10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087219.1 MGP_BALBcJ_G0033099.1 mouse_genomes_project 7 133434157 133455405 - MGP_BALBcJ_P0087219 Mettl10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087220.1 MGP_BALBcJ_G0033099.1 mouse_genomes_project 7 133452925 133455459 - Mettl10 protein_coding processed_transcript MGP_BALBcJ_T0087508.1 MGP_BALBcJ_G0033187.1 mouse_genomes_project 7 141679070 141681675 + MGP_BALBcJ_P0087508 Ifitm1 protein_coding protein_coding MGP_BALBcJ_T0087509.1 MGP_BALBcJ_G0033187.1 mouse_genomes_project 7 141679877 141681675 + MGP_BALBcJ_P0087509 Ifitm1 protein_coding protein_coding MGP_BALBcJ_T0087510.1 MGP_BALBcJ_G0033187.1 mouse_genomes_project 7 141679889 141681675 + MGP_BALBcJ_P0087510 Ifitm1 protein_coding protein_coding MGP_BALBcJ_T0008962.1 MGP_BALBcJ_G0007223.1 mouse_genomes_project 7 109285296 109296072 - Gm26599 lincRNA lincRNA MGP_BALBcJ_T0085553.1 MGP_BALBcJ_G0032669.1 mouse_genomes_project 7 104011526 104013026 - MGP_BALBcJ_P0085553 Hbb-y protein_coding protein_coding MGP_BALBcJ_T0082680.1 MGP_BALBcJ_G0031939.1 mouse_genomes_project 7 26996264 27002795 + MGP_BALBcJ_P0082680 Fbxo27 protein_coding protein_coding MGP_BALBcJ_T0082681.1 MGP_BALBcJ_G0031939.1 mouse_genomes_project 7 26996454 26996930 + MGP_BALBcJ_P0082681 Fbxo27 protein_coding protein_coding MGP_BALBcJ_T0082682.1 MGP_BALBcJ_G0031939.1 mouse_genomes_project 7 26996518 27002799 + MGP_BALBcJ_P0082682 Fbxo27 protein_coding protein_coding MGP_BALBcJ_T0082683.1 MGP_BALBcJ_G0031939.1 mouse_genomes_project 7 27000106 27001416 + Fbxo27 protein_coding processed_transcript MGP_BALBcJ_T0101310.1 MGP_BALBcJ_G0039346.1 mouse_genomes_project 7 33684349 33684479 - Gm25922 snoRNA snoRNA MGP_BALBcJ_T0002190.1 MGP_BALBcJ_G0002102.1 mouse_genomes_project 7 1632366 1633661 + TEC TEC MGP_BALBcJ_T0087144.1 MGP_BALBcJ_G0033077.1 mouse_genomes_project 7 131317962 131369485 + MGP_BALBcJ_P0087144 Btbd16 protein_coding protein_coding MGP_BALBcJ_T0086413.1 MGP_BALBcJ_G0032953.1 mouse_genomes_project 7 124463676 124886745 + MGP_BALBcJ_P0086413 Hs3st4 protein_coding protein_coding MGP_BALBcJ_T0085829.1 MGP_BALBcJ_G0032819.1 mouse_genomes_project 7 109149468 109150401 - MGP_BALBcJ_P0085829 Olfr514 protein_coding protein_coding MGP_BALBcJ_T0086905.1 MGP_BALBcJ_G0033036.1 mouse_genomes_project 7 128263217 128268095 + MGP_BALBcJ_P0086905 Orai3 protein_coding protein_coding MGP_BALBcJ_T0086906.1 MGP_BALBcJ_G0033036.1 mouse_genomes_project 7 128263217 128268553 + MGP_BALBcJ_P0086906 Orai3 protein_coding protein_coding MGP_BALBcJ_T0086907.1 MGP_BALBcJ_G0033036.1 mouse_genomes_project 7 128263217 128268553 + MGP_BALBcJ_P0086907 Orai3 protein_coding protein_coding MGP_BALBcJ_T0083407.1 MGP_BALBcJ_G0032089.1 mouse_genomes_project 7 37022363 37033273 - MGP_BALBcJ_P0083407 Plekhf1 protein_coding protein_coding MGP_BALBcJ_T0083073.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29182459 29184377 + Krtdap protein_coding retained_intron MGP_BALBcJ_T0083074.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29182468 29185681 + MGP_BALBcJ_P0083074 Krtdap protein_coding protein_coding MGP_BALBcJ_T0083075.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29182468 29185697 + MGP_BALBcJ_P0083075 Krtdap protein_coding protein_coding MGP_BALBcJ_T0083076.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29182468 29185703 + MGP_BALBcJ_P0083076 Krtdap protein_coding protein_coding MGP_BALBcJ_T0083077.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29182468 29185711 + MGP_BALBcJ_P0083077 Krtdap protein_coding protein_coding MGP_BALBcJ_T0083078.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29182468 29185699 + MGP_BALBcJ_P0083078 Krtdap protein_coding protein_coding MGP_BALBcJ_T0083079.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29184415 29185699 + Krtdap protein_coding retained_intron MGP_BALBcJ_T0083080.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29184467 29185697 + Krtdap protein_coding retained_intron MGP_BALBcJ_T0083081.1 MGP_BALBcJ_G0032029.1 mouse_genomes_project 7 29185100 29185699 + Krtdap protein_coding retained_intron MGP_BALBcJ_T0081554.1 MGP_BALBcJ_G0031593.1 mouse_genomes_project 7 3614541 3615595 - MGP_BALBcJ_P0081554 Olfr1349 protein_coding protein_coding MGP_BALBcJ_T0083423.1 MGP_BALBcJ_G0032095.1 mouse_genomes_project 7 40411727 40457949 - MGP_BALBcJ_P0083423 Vmn2r57 protein_coding protein_coding MGP_BALBcJ_T0008887.1 MGP_BALBcJ_G0007174.1 mouse_genomes_project 7 71589262 71656753 + 1700011C11Rik lincRNA lincRNA MGP_BALBcJ_T0015670.1 MGP_BALBcJ_G0013767.1 mouse_genomes_project 7 1157347 1157501 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0083979.1 MGP_BALBcJ_G0032246.1 mouse_genomes_project 7 45316979 45319826 - MGP_BALBcJ_P0083979 Emp3 protein_coding protein_coding MGP_BALBcJ_T0083980.1 MGP_BALBcJ_G0032246.1 mouse_genomes_project 7 45316979 45320403 - MGP_BALBcJ_P0083980 Emp3 protein_coding protein_coding MGP_BALBcJ_T0008784.1 MGP_BALBcJ_G0007092.1 mouse_genomes_project 7 14460212 14463753 - 9330104G04Rik lincRNA lincRNA MGP_BALBcJ_T0008785.1 MGP_BALBcJ_G0007092.1 mouse_genomes_project 7 14461809 14463753 - 9330104G04Rik lincRNA lincRNA MGP_BALBcJ_T0002225.1 MGP_BALBcJ_G0002137.1 mouse_genomes_project 7 54485071 54487285 + TEC TEC MGP_BALBcJ_T0087513.1 MGP_BALBcJ_G0033190.1 mouse_genomes_project 7 141754635 141755125 + MGP_BALBcJ_P0087513 Gm17387 protein_coding protein_coding MGP_BALBcJ_T0085757.1 MGP_BALBcJ_G0032755.1 mouse_genomes_project 7 106982796 106983748 - MGP_BALBcJ_P0085757 Olfr693 protein_coding protein_coding MGP_BALBcJ_T0085641.1 MGP_BALBcJ_G0032727.1 mouse_genomes_project 7 105299892 105300922 - MGP_BALBcJ_P0085641 Olfr684 protein_coding protein_coding MGP_BALBcJ_T0087102.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130676816 130780890 - MGP_BALBcJ_P0087102 Fgfr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087103.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130676816 130780890 - MGP_BALBcJ_P0087103 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087104.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130677912 130682189 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0087105.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678013 130780908 - MGP_BALBcJ_P0087105 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087106.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678013 130780836 - MGP_BALBcJ_P0087106 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087107.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678112 130686219 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0087108.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087108 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087109.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087109 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087110.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087110 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087111.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087111 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087112.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087112 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087113.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087113 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087114.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087114 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087115.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087115 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087116.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087116 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087117.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087117 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087118.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087118 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087119.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087119 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087120.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130678263 130776502 - MGP_BALBcJ_P0087120 Fgfr2 protein_coding protein_coding MGP_BALBcJ_T0087121.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130684046 130692369 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0087122.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130692084 130697049 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0087123.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130694741 130711421 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0087124.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130699181 130710933 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0087125.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130714381 130743501 - MGP_BALBcJ_P0087125 Fgfr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087126.1 MGP_BALBcJ_G0033073.1 mouse_genomes_project 7 130755676 130778620 - Fgfr2 protein_coding retained_intron MGP_BALBcJ_T0018359.1 MGP_BALBcJ_G0015619.1 mouse_genomes_project 7 84456772 84538555 + 2610206C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0018360.1 MGP_BALBcJ_G0015619.1 mouse_genomes_project 7 84537708 84538026 + 2610206C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0081779.1 MGP_BALBcJ_G0031685.1 mouse_genomes_project 7 13834373 13836055 - MGP_BALBcJ_P0081779 Inafm1 protein_coding protein_coding MGP_BALBcJ_T0087190.1 MGP_BALBcJ_G0033090.1 mouse_genomes_project 7 132142065 132150607 + MGP_BALBcJ_P0087190 Hmx2 protein_coding protein_coding MGP_BALBcJ_T0087191.1 MGP_BALBcJ_G0033090.1 mouse_genomes_project 7 132148078 132150607 + MGP_BALBcJ_P0087191 Hmx2 protein_coding protein_coding MGP_BALBcJ_T0086583.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127179201 127183649 - MGP_BALBcJ_P0086583 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086584.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127179201 127184245 - MGP_BALBcJ_P0086584 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086585.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127179309 127182602 - MGP_BALBcJ_P0086585 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086586.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127179739 127180656 - Coro1a protein_coding retained_intron MGP_BALBcJ_T0086587.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127179783 127180689 - Coro1a protein_coding retained_intron MGP_BALBcJ_T0086588.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127180419 127181524 - Coro1a protein_coding retained_intron MGP_BALBcJ_T0086589.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127180420 127182603 - MGP_BALBcJ_P0086589 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086590.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127180758 127181901 - Coro1a protein_coding retained_intron MGP_BALBcJ_T0086591.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127180775 127184183 - MGP_BALBcJ_P0086591 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086592.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127181319 127183976 - MGP_BALBcJ_P0086592 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086593.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127181330 127187212 - MGP_BALBcJ_P0086593 Coro1a protein_coding protein_coding MGP_BALBcJ_T0086594.1 MGP_BALBcJ_G0032982.1 mouse_genomes_project 7 127182260 127184182 - Coro1a protein_coding retained_intron MGP_BALBcJ_T0010817.1 MGP_BALBcJ_G0008942.1 mouse_genomes_project 7 3902945 3903029 + Mir3099 miRNA miRNA MGP_BALBcJ_T0081601.1 MGP_BALBcJ_G0031625.1 mouse_genomes_project 7 9836694 9854516 + MGP_BALBcJ_P0081601 Zfp606 protein_coding protein_coding MGP_BALBcJ_T0081602.1 MGP_BALBcJ_G0031625.1 mouse_genomes_project 7 9836706 9842184 + Zfp606 protein_coding retained_intron MGP_BALBcJ_T0081603.1 MGP_BALBcJ_G0031625.1 mouse_genomes_project 7 9836764 9853841 + MGP_BALBcJ_P0081603 Zfp606 protein_coding protein_coding MGP_BALBcJ_T0081604.1 MGP_BALBcJ_G0031625.1 mouse_genomes_project 7 9847795 9853832 + Zfp606 protein_coding retained_intron MGP_BALBcJ_T0015823.1 MGP_BALBcJ_G0013920.1 mouse_genomes_project 7 80639766 80640090 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0082256.1 MGP_BALBcJ_G0031834.1 mouse_genomes_project 7 22939972 22944789 + MGP_BALBcJ_P0082256 Cd79a protein_coding protein_coding MGP_BALBcJ_T0083840.1 MGP_BALBcJ_G0032211.1 mouse_genomes_project 7 44796471 44797513 + MGP_BALBcJ_P0083840 Lhb protein_coding protein_coding MGP_BALBcJ_T0085902.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110658625 110972836 - MGP_BALBcJ_P0085902 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085903.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110658634 110972834 - MGP_BALBcJ_P0085903 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085904.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110660010 110972675 - MGP_BALBcJ_P0085904 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085905.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110671606 110691110 - Sbf2 protein_coding retained_intron MGP_BALBcJ_T0085906.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110680798 110712884 - MGP_BALBcJ_P0085906 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085907.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110690008 110703278 - Sbf2 protein_coding retained_intron MGP_BALBcJ_T0085908.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110692151 110715322 - MGP_BALBcJ_P0085908 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085909.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110728577 110972828 - Sbf2 protein_coding retained_intron MGP_BALBcJ_T0085910.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110728888 110972810 - Sbf2 protein_coding retained_intron MGP_BALBcJ_T0085911.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110774545 110794551 - MGP_BALBcJ_P0085911 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085912.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110777217 110972796 - Sbf2 protein_coding retained_intron MGP_BALBcJ_T0085913.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110793544 110972819 - MGP_BALBcJ_P0085913 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085914.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110793731 110815699 - MGP_BALBcJ_P0085914 Sbf2 protein_coding protein_coding MGP_BALBcJ_T0085915.1 MGP_BALBcJ_G0032845.1 mouse_genomes_project 7 110815642 110972675 - MGP_BALBcJ_P0085915 Sbf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0008869.1 MGP_BALBcJ_G0007161.1 mouse_genomes_project 7 65652536 65653108 - Gm45081 lincRNA lincRNA MGP_BALBcJ_T0083240.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32924689 32956687 - MGP_BALBcJ_P0083240 Gpi1 protein_coding protein_coding MGP_BALBcJ_T0083241.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32925518 32934548 - Gpi1 protein_coding retained_intron MGP_BALBcJ_T0083242.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32925565 32932080 - MGP_BALBcJ_P0083242 Gpi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083243.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32926568 32937620 - MGP_BALBcJ_P0083243 Gpi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083244.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32926592 32953094 - MGP_BALBcJ_P0083244 Gpi1 protein_coding protein_coding MGP_BALBcJ_T0083245.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32927000 32930448 - Gpi1 protein_coding retained_intron MGP_BALBcJ_T0083246.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32928062 32956593 - MGP_BALBcJ_P0083246 Gpi1 protein_coding protein_coding MGP_BALBcJ_T0083247.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32939392 32956614 - Gpi1 protein_coding retained_intron MGP_BALBcJ_T0083248.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32951223 32956146 - Gpi1 protein_coding processed_transcript MGP_BALBcJ_T0083249.1 MGP_BALBcJ_G0032061.1 mouse_genomes_project 7 32955504 32956640 - Gpi1 protein_coding retained_intron MGP_BALBcJ_T0015749.1 MGP_BALBcJ_G0013846.1 mouse_genomes_project 7 32581154 32581221 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010861.1 MGP_BALBcJ_G0008986.1 mouse_genomes_project 7 61197862 61197942 - Gm23490 miRNA miRNA MGP_BALBcJ_T0005267.1 MGP_BALBcJ_G0004470.1 mouse_genomes_project 7 127128050 127129102 - 2510046G10Rik antisense antisense MGP_BALBcJ_T0005268.1 MGP_BALBcJ_G0004470.1 mouse_genomes_project 7 127128730 127129078 - 2510046G10Rik antisense antisense MGP_BALBcJ_T0086235.1 MGP_BALBcJ_G0032911.1 mouse_genomes_project 7 120564997 120585733 + MGP_BALBcJ_P0086235 Tmem159 protein_coding protein_coding MGP_BALBcJ_T0086236.1 MGP_BALBcJ_G0032911.1 mouse_genomes_project 7 120565016 120567861 + Tmem159 protein_coding retained_intron MGP_BALBcJ_T0086237.1 MGP_BALBcJ_G0032911.1 mouse_genomes_project 7 120565529 120585739 + MGP_BALBcJ_P0086237 Tmem159 protein_coding protein_coding MGP_BALBcJ_T0086181.1 MGP_BALBcJ_G0032896.1 mouse_genomes_project 7 119611198 119651203 - MGP_BALBcJ_P0086181 Gpr139 protein_coding protein_coding MGP_BALBcJ_T0008786.1 MGP_BALBcJ_G0007093.1 mouse_genomes_project 7 15009453 15085553 - lincRNA lincRNA MGP_BALBcJ_T0084246.1 MGP_BALBcJ_G0032319.1 mouse_genomes_project 7 61983191 61985750 - MGP_BALBcJ_P0084246 Mkrn3 protein_coding protein_coding MGP_BALBcJ_T0082790.1 MGP_BALBcJ_G0031962.1 mouse_genomes_project 7 27587434 27600675 - MGP_BALBcJ_P0082790 Kcnk6 protein_coding protein_coding MGP_BALBcJ_T0083445.1 MGP_BALBcJ_G0032101.1 mouse_genomes_project 7 40940121 40994930 - MGP_BALBcJ_P0083445 protein_coding protein_coding MGP_BALBcJ_T0086486.1 MGP_BALBcJ_G0032965.1 mouse_genomes_project 7 126858500 126872674 - MGP_BALBcJ_P0086486 Nfatc2ip protein_coding protein_coding MGP_BALBcJ_T0086487.1 MGP_BALBcJ_G0032965.1 mouse_genomes_project 7 126860523 126866364 - MGP_BALBcJ_P0086487 Nfatc2ip protein_coding protein_coding MGP_BALBcJ_T0083219.1 MGP_BALBcJ_G0032056.1 mouse_genomes_project 7 32672204 32673603 + MGP_BALBcJ_P0083219 Scgb1b27 protein_coding protein_coding MGP_BALBcJ_T0083220.1 MGP_BALBcJ_G0032056.1 mouse_genomes_project 7 32672288 32673171 + MGP_BALBcJ_P0083220 Scgb1b27 protein_coding protein_coding MGP_BALBcJ_T0081875.1 MGP_BALBcJ_G0031708.1 mouse_genomes_project 7 14670810 14692715 + Psg16 protein_coding retained_intron MGP_BALBcJ_T0081876.1 MGP_BALBcJ_G0031708.1 mouse_genomes_project 7 14685121 14691192 + MGP_BALBcJ_P0081876 Psg16 protein_coding protein_coding MGP_BALBcJ_T0081877.1 MGP_BALBcJ_G0031708.1 mouse_genomes_project 7 14687662 14696346 + MGP_BALBcJ_P0081877 Psg16 protein_coding protein_coding MGP_BALBcJ_T0085546.1 MGP_BALBcJ_G0032664.1 mouse_genomes_project 7 103933213 103934176 - MGP_BALBcJ_P0085546 Olfr67 protein_coding protein_coding MGP_BALBcJ_T0098652.1 MGP_BALBcJ_G0036706.1 mouse_genomes_project 7 132658101 132658221 + n-R5s159 rRNA rRNA MGP_BALBcJ_T0005138.1 MGP_BALBcJ_G0004378.1 mouse_genomes_project 7 17668510 17670774 + Gm16175 antisense antisense MGP_BALBcJ_T0015866.1 MGP_BALBcJ_G0013963.1 mouse_genomes_project 7 109724041 109725439 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101327.1 MGP_BALBcJ_G0039363.1 mouse_genomes_project 7 58883157 58883245 - Gm22496 snoRNA snoRNA MGP_BALBcJ_T0087514.1 MGP_BALBcJ_G0033191.1 mouse_genomes_project 7 141789421 141800144 + MGP_BALBcJ_P0087514 B4galnt4 protein_coding protein_coding MGP_BALBcJ_T0005136.1 MGP_BALBcJ_G0004376.1 mouse_genomes_project 7 17102289 17103537 + 1700058P15Rik antisense antisense MGP_BALBcJ_T0087740.1 MGP_BALBcJ_G0033237.1 mouse_genomes_project 7 143079218 143091376 - Ifitm10 protein_coding processed_transcript MGP_BALBcJ_T0087741.1 MGP_BALBcJ_G0033237.1 mouse_genomes_project 7 143079489 143135575 - MGP_BALBcJ_P0087741 Ifitm10 protein_coding protein_coding MGP_BALBcJ_T0087742.1 MGP_BALBcJ_G0033237.1 mouse_genomes_project 7 143079508 143135403 - Ifitm10 protein_coding processed_transcript MGP_BALBcJ_T0087743.1 MGP_BALBcJ_G0033237.1 mouse_genomes_project 7 143116442 143135393 - MGP_BALBcJ_P0087743 Ifitm10 protein_coding protein_coding MGP_BALBcJ_T0087744.1 MGP_BALBcJ_G0033237.1 mouse_genomes_project 7 143116856 143136886 - MGP_BALBcJ_P0087744 Ifitm10 protein_coding protein_coding MGP_BALBcJ_T0087745.1 MGP_BALBcJ_G0033237.1 mouse_genomes_project 7 143134252 143136015 - Ifitm10 protein_coding processed_transcript MGP_BALBcJ_T0082947.1 MGP_BALBcJ_G0031998.1 mouse_genomes_project 7 28706960 28709443 - MGP_BALBcJ_P0082947 Sdhaf1 protein_coding protein_coding MGP_BALBcJ_T0083823.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44751490 44770760 - MGP_BALBcJ_P0083823 Snrnp70 protein_coding protein_coding MGP_BALBcJ_T0083824.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44751496 44758923 - MGP_BALBcJ_P0083824 Snrnp70 protein_coding protein_coding MGP_BALBcJ_T0083825.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44751499 44770676 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083826.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44751500 44770710 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083827.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44752183 44767340 - MGP_BALBcJ_P0083827 Snrnp70 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083828.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44756390 44759312 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083829.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44758577 44769818 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083830.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44758745 44762807 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083831.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44758795 44770195 - MGP_BALBcJ_P0083831 Snrnp70 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0083832.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44758810 44770217 - MGP_BALBcJ_P0083832 Snrnp70 protein_coding protein_coding MGP_BALBcJ_T0083833.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44761985 44769738 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083834.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44762426 44770727 - MGP_BALBcJ_P0083834 Snrnp70 protein_coding protein_coding MGP_BALBcJ_T0083835.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44762470 44767797 - Snrnp70 protein_coding processed_transcript MGP_BALBcJ_T0083836.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44766024 44767903 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0083837.1 MGP_BALBcJ_G0032208.1 mouse_genomes_project 7 44766842 44770575 - Snrnp70 protein_coding retained_intron MGP_BALBcJ_T0082298.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23131615 23182660 - MGP_BALBcJ_P0082298 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082299.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23137224 23182660 - MGP_BALBcJ_P0082299 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082300.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23137268 23182649 - MGP_BALBcJ_P0082300 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082301.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23137268 23182660 - MGP_BALBcJ_P0082301 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082302.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23137425 23171341 - MGP_BALBcJ_P0082302 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082303.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23137996 23182684 - MGP_BALBcJ_P0082303 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082304.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23145360 23170524 - MGP_BALBcJ_P0082304 Pou2f2 protein_coding protein_coding MGP_BALBcJ_T0082305.1 MGP_BALBcJ_G0031840.1 mouse_genomes_project 7 23170283 23211528 - Pou2f2 protein_coding retained_intron MGP_BALBcJ_T0018382.1 MGP_BALBcJ_G0015631.1 mouse_genomes_project 7 127944112 127952954 + B130055M24Rik processed_transcript processed_transcript MGP_BALBcJ_T0002206.1 MGP_BALBcJ_G0002118.1 mouse_genomes_project 7 35506115 35508498 + TEC TEC MGP_BALBcJ_T0085794.1 MGP_BALBcJ_G0032785.1 mouse_genomes_project 7 107907616 107908807 - MGP_BALBcJ_P0085794 5330417H12Rik protein_coding protein_coding MGP_BALBcJ_T0011682.1 MGP_BALBcJ_G0009807.1 mouse_genomes_project 7 144016112 144016572 + Gm27395 misc_RNA misc_RNA MGP_BALBcJ_T0084917.1 MGP_BALBcJ_G0032467.1 mouse_genomes_project 7 86372676 86373698 + MGP_BALBcJ_P0084917 Olfr297 protein_coding protein_coding MGP_BALBcJ_T0085817.1 MGP_BALBcJ_G0032807.1 mouse_genomes_project 7 108693554 108694501 + MGP_BALBcJ_P0085817 protein_coding protein_coding MGP_BALBcJ_T0008839.1 MGP_BALBcJ_G0007138.1 mouse_genomes_project 7 39625968 39634558 + 4933402C06Rik lincRNA lincRNA MGP_BALBcJ_T0008840.1 MGP_BALBcJ_G0007138.1 mouse_genomes_project 7 39625968 39642446 + 4933402C06Rik lincRNA lincRNA MGP_BALBcJ_T0084905.1 MGP_BALBcJ_G0032456.1 mouse_genomes_project 7 86042112 86070438 - MGP_BALBcJ_P0084905 Vmn2r76 protein_coding protein_coding MGP_BALBcJ_T0081706.1 MGP_BALBcJ_G0031657.1 mouse_genomes_project 7 11303714 11393999 - MGP_BALBcJ_P0081706 protein_coding protein_coding MGP_BALBcJ_T0081481.1 MGP_BALBcJ_G0031556.1 mouse_genomes_project 7 2004321 2013534 - MGP_BALBcJ_P0081481 Fiz1 protein_coding protein_coding MGP_BALBcJ_T0081482.1 MGP_BALBcJ_G0031556.1 mouse_genomes_project 7 2004321 2010605 - MGP_BALBcJ_P0081482 Fiz1 protein_coding protein_coding MGP_BALBcJ_T0081483.1 MGP_BALBcJ_G0031556.1 mouse_genomes_project 7 2004321 2013978 - MGP_BALBcJ_P0081483 Fiz1 protein_coding protein_coding MGP_BALBcJ_T0015764.1 MGP_BALBcJ_G0013861.1 mouse_genomes_project 7 40623561 40625393 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010874.1 MGP_BALBcJ_G0008999.1 mouse_genomes_project 7 61605691 61605779 - Gm24923 miRNA miRNA MGP_BALBcJ_T0085544.1 MGP_BALBcJ_G0032662.1 mouse_genomes_project 7 103885291 103886357 - MGP_BALBcJ_P0085544 Olfr630 protein_coding protein_coding MGP_BALBcJ_T0085620.1 MGP_BALBcJ_G0032707.1 mouse_genomes_project 7 104625495 104626422 - MGP_BALBcJ_P0085620 Olfr655 protein_coding protein_coding MGP_BALBcJ_T0015702.1 MGP_BALBcJ_G0013799.1 mouse_genomes_project 7 11660591 11662737 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024771.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22599960 22667304 - Akap7 protein_coding processed_transcript MGP_BALBcJ_T0024772.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22599960 22630192 - MGP_BALBcJ_P0024772 Akap7 protein_coding protein_coding MGP_BALBcJ_T0024773.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22600987 22730405 - MGP_BALBcJ_P0024773 Akap7 protein_coding protein_coding MGP_BALBcJ_T0024774.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22646900 22719770 - MGP_BALBcJ_P0024774 Akap7 protein_coding unknown_likely_coding MGP_BALBcJ_T0024775.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22696150 22727337 - MGP_BALBcJ_P0024775 Akap7 protein_coding protein_coding MGP_BALBcJ_T0024776.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22709463 22730348 - MGP_BALBcJ_P0024776 Akap7 protein_coding protein_coding MGP_BALBcJ_T0024777.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22714055 22728309 - MGP_BALBcJ_P0024777 Akap7 protein_coding protein_coding MGP_BALBcJ_T0024778.1 MGP_BALBcJ_G0017037.1 mouse_genomes_project 10 22714156 22738890 - MGP_BALBcJ_P0024778 Akap7 protein_coding protein_coding MGP_BALBcJ_T0099175.1 MGP_BALBcJ_G0037211.1 mouse_genomes_project 10 27937181 27937283 + Gm22623 snRNA snRNA MGP_BALBcJ_T0006092.1 MGP_BALBcJ_G0005100.1 mouse_genomes_project 10 81016846 81028851 + 1700028I16Rik lincRNA lincRNA MGP_BALBcJ_T0025327.1 MGP_BALBcJ_G0017224.1 mouse_genomes_project 10 59299706 59306908 + MGP_BALBcJ_P0025327 Tysnd1 protein_coding protein_coding MGP_BALBcJ_T0009620.1 MGP_BALBcJ_G0007745.1 mouse_genomes_project 10 127270093 127270182 + Mir8105 miRNA miRNA MGP_BALBcJ_T0100475.1 MGP_BALBcJ_G0038511.1 mouse_genomes_project 10 127158533 127158668 + Gm23182 snoRNA snoRNA MGP_BALBcJ_T0006126.1 MGP_BALBcJ_G0005118.1 mouse_genomes_project 10 110080557 110087997 - 4933440J02Rik lincRNA lincRNA MGP_BALBcJ_T0026320.1 MGP_BALBcJ_G0017473.1 mouse_genomes_project 10 79053759 79069851 - MGP_BALBcJ_P0026320 Sgta protein_coding unknown_likely_coding MGP_BALBcJ_T0026321.1 MGP_BALBcJ_G0017473.1 mouse_genomes_project 10 79053765 79069869 - MGP_BALBcJ_P0026321 Sgta protein_coding protein_coding MGP_BALBcJ_T0024551.1 MGP_BALBcJ_G0016956.1 mouse_genomes_project 10 10177808 10192840 - MGP_BALBcJ_P0024551 Ltv1 protein_coding protein_coding MGP_BALBcJ_T0002991.1 MGP_BALBcJ_G0002801.1 mouse_genomes_project 10 8207772 8208472 - Gm16577 antisense antisense MGP_BALBcJ_T0025084.1 MGP_BALBcJ_G0017143.1 mouse_genomes_project 10 42756203 42849136 + MGP_BALBcJ_P0025084 Prep protein_coding protein_coding MGP_BALBcJ_T0026516.1 MGP_BALBcJ_G0017515.1 mouse_genomes_project 10 80346120 80365109 - MGP_BALBcJ_P0026516 Zfp938 protein_coding protein_coding MGP_BALBcJ_T0026517.1 MGP_BALBcJ_G0017515.1 mouse_genomes_project 10 80346124 80365116 - MGP_BALBcJ_P0026517 Zfp938 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099177.1 MGP_BALBcJ_G0037213.1 mouse_genomes_project 10 28598803 28598910 - Gm23790 snRNA snRNA MGP_BALBcJ_T0011251.1 MGP_BALBcJ_G0009376.1 mouse_genomes_project 10 68248568 68248880 - Gm22320 misc_RNA misc_RNA MGP_BALBcJ_T0006070.1 MGP_BALBcJ_G0005084.1 mouse_genomes_project 10 58607945 58614759 + Gm20611 lincRNA lincRNA MGP_BALBcJ_T0027231.1 MGP_BALBcJ_G0017733.1 mouse_genomes_project 10 123970178 124074730 - MGP_BALBcJ_P0027231 Slc16a7 protein_coding protein_coding MGP_BALBcJ_T0027232.1 MGP_BALBcJ_G0017733.1 mouse_genomes_project 10 123971208 124054643 - MGP_BALBcJ_P0027232 Slc16a7 protein_coding protein_coding MGP_BALBcJ_T0025408.1 MGP_BALBcJ_G0017242.1 mouse_genomes_project 10 60285426 60360216 - MGP_BALBcJ_P0025408 Stox1 protein_coding protein_coding MGP_BALBcJ_T0025409.1 MGP_BALBcJ_G0017242.1 mouse_genomes_project 10 60285426 60359889 - MGP_BALBcJ_P0025409 Stox1 protein_coding protein_coding MGP_BALBcJ_T0025410.1 MGP_BALBcJ_G0017242.1 mouse_genomes_project 10 60292458 60359889 - MGP_BALBcJ_P0025410 Stox1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012358.1 MGP_BALBcJ_G0010455.1 mouse_genomes_project 10 7302323 7303536 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099218.1 MGP_BALBcJ_G0037254.1 mouse_genomes_project 10 109377478 109377584 - Gm22236 snRNA snRNA MGP_BALBcJ_T0024952.1 MGP_BALBcJ_G0017104.1 mouse_genomes_project 10 38226220 38244880 + MGP_BALBcJ_P0024952 Ddo protein_coding protein_coding MGP_BALBcJ_T0024692.1 MGP_BALBcJ_G0016998.1 mouse_genomes_project 10 18727136 18756874 + MGP_BALBcJ_P0024692 1700020N01Rik protein_coding protein_coding MGP_BALBcJ_T0024693.1 MGP_BALBcJ_G0016998.1 mouse_genomes_project 10 18750424 18756263 + 1700020N01Rik protein_coding processed_transcript MGP_BALBcJ_T0026897.1 MGP_BALBcJ_G0017611.1 mouse_genomes_project 10 93819994 93822553 - MGP_BALBcJ_P0026897 protein_coding protein_coding MGP_BALBcJ_T0026652.1 MGP_BALBcJ_G0017559.1 mouse_genomes_project 10 85402542 85565214 + MGP_BALBcJ_P0026652 1700113H08Rik protein_coding protein_coding MGP_BALBcJ_T0026653.1 MGP_BALBcJ_G0017559.1 mouse_genomes_project 10 85402543 85565213 + MGP_BALBcJ_P0026653 1700113H08Rik protein_coding protein_coding MGP_BALBcJ_T0026654.1 MGP_BALBcJ_G0017559.1 mouse_genomes_project 10 85540617 85565212 + MGP_BALBcJ_P0026654 1700113H08Rik protein_coding protein_coding MGP_BALBcJ_T0011247.1 MGP_BALBcJ_G0009372.1 mouse_genomes_project 10 39921786 39922031 + Gm23533 misc_RNA misc_RNA MGP_BALBcJ_T0012406.1 MGP_BALBcJ_G0010503.1 mouse_genomes_project 10 78963882 78964139 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009554.1 MGP_BALBcJ_G0007679.1 mouse_genomes_project 10 42609239 42609350 - Gm24271 miRNA miRNA MGP_BALBcJ_T0006111.1 MGP_BALBcJ_G0005108.1 mouse_genomes_project 10 90537664 90540233 + Gm26700 lincRNA lincRNA MGP_BALBcJ_T0027534.1 MGP_BALBcJ_G0017846.1 mouse_genomes_project 10 128219141 128224026 + MGP_BALBcJ_P0027534 Olfr781 protein_coding protein_coding MGP_BALBcJ_T0027535.1 MGP_BALBcJ_G0017846.1 mouse_genomes_project 10 128223090 128224026 + MGP_BALBcJ_P0027535 Olfr781 protein_coding protein_coding MGP_BALBcJ_T0025503.1 MGP_BALBcJ_G0017266.1 mouse_genomes_project 10 65821169 66003572 - MGP_BALBcJ_P0025503 Arid5b protein_coding protein_coding MGP_BALBcJ_T0026142.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78133570 78143677 + MGP_BALBcJ_P0026142 Midn protein_coding protein_coding MGP_BALBcJ_T0026143.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78133570 78143676 + MGP_BALBcJ_P0026143 Midn protein_coding protein_coding MGP_BALBcJ_T0026144.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78134431 78135598 + MGP_BALBcJ_P0026144 Midn protein_coding protein_coding MGP_BALBcJ_T0026145.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78135205 78138996 + Midn protein_coding processed_transcript MGP_BALBcJ_T0026146.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78135769 78139177 + MGP_BALBcJ_P0026146 Midn protein_coding protein_coding MGP_BALBcJ_T0026147.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78136466 78139781 + MGP_BALBcJ_P0026147 Midn protein_coding protein_coding MGP_BALBcJ_T0026148.1 MGP_BALBcJ_G0017425.1 mouse_genomes_project 10 78136550 78139005 + MGP_BALBcJ_P0026148 Midn protein_coding protein_coding MGP_BALBcJ_T0025328.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59319480 59344445 + MGP_BALBcJ_P0025328 Aifm2 protein_coding protein_coding MGP_BALBcJ_T0025329.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59319504 59333725 + Aifm2 protein_coding retained_intron MGP_BALBcJ_T0025330.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59319528 59345052 + MGP_BALBcJ_P0025330 Aifm2 protein_coding protein_coding MGP_BALBcJ_T0025331.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59319540 59344439 + MGP_BALBcJ_P0025331 Aifm2 protein_coding protein_coding MGP_BALBcJ_T0025332.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59319549 59320453 + Aifm2 protein_coding processed_transcript MGP_BALBcJ_T0025333.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59324777 59344445 + MGP_BALBcJ_P0025333 Aifm2 protein_coding protein_coding MGP_BALBcJ_T0025334.1 MGP_BALBcJ_G0017225.1 mouse_genomes_project 10 59333951 59340362 + Aifm2 protein_coding retained_intron MGP_BALBcJ_T0027195.1 MGP_BALBcJ_G0017722.1 mouse_genomes_project 10 120239118 120277781 - MGP_BALBcJ_P0027195 Tbk1 protein_coding protein_coding MGP_BALBcJ_T0026970.1 MGP_BALBcJ_G0017642.1 mouse_genomes_project 10 101905027 101960468 + MGP_BALBcJ_P0026970 Slc6a15 protein_coding unknown_likely_coding MGP_BALBcJ_T0027485.1 MGP_BALBcJ_G0017817.1 mouse_genomes_project 10 127514575 127521703 - MGP_BALBcJ_P0027485 Cdk2 protein_coding protein_coding MGP_BALBcJ_T0027486.1 MGP_BALBcJ_G0017817.1 mouse_genomes_project 10 127514575 127521703 - MGP_BALBcJ_P0027486 Cdk2 protein_coding protein_coding MGP_BALBcJ_T0011263.1 MGP_BALBcJ_G0009388.1 mouse_genomes_project 10 94023624 94023949 + Gm23776 misc_RNA misc_RNA MGP_BALBcJ_T0009609.1 MGP_BALBcJ_G0007734.1 mouse_genomes_project 10 121700857 121700942 - Mirlet7i miRNA miRNA MGP_BALBcJ_T0012373.1 MGP_BALBcJ_G0010470.1 mouse_genomes_project 10 23278391 23278957 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024737.1 MGP_BALBcJ_G0017019.1 mouse_genomes_project 10 21331555 21332599 + MGP_BALBcJ_P0024737 Taar4 protein_coding protein_coding MGP_BALBcJ_T0000821.1 MGP_BALBcJ_G0000753.1 mouse_genomes_project 10 103628903 103629612 - TEC TEC MGP_BALBcJ_T0099207.1 MGP_BALBcJ_G0037243.1 mouse_genomes_project 10 88175014 88175121 - Gm26180 snRNA snRNA MGP_BALBcJ_T0000809.1 MGP_BALBcJ_G0000742.1 mouse_genomes_project 10 34587339 34587686 + TEC TEC MGP_BALBcJ_T0025138.1 MGP_BALBcJ_G0017166.1 mouse_genomes_project 10 51109864 51118564 + MGP_BALBcJ_P0025138 Pln protein_coding protein_coding MGP_BALBcJ_T0025139.1 MGP_BALBcJ_G0017166.1 mouse_genomes_project 10 51109864 51118564 + MGP_BALBcJ_P0025139 Pln protein_coding protein_coding MGP_BALBcJ_T0025389.1 MGP_BALBcJ_G0017236.1 mouse_genomes_project 10 60067226 60069060 + MGP_BALBcJ_P0025389 4930507D05Rik protein_coding protein_coding MGP_BALBcJ_T0000805.1 MGP_BALBcJ_G0000738.1 mouse_genomes_project 10 11343671 11344497 + TEC TEC MGP_BALBcJ_T0024646.1 MGP_BALBcJ_G0016984.1 mouse_genomes_project 10 16839257 16881416 + MGP_BALBcJ_P0024646 Il20ra protein_coding protein_coding MGP_BALBcJ_T0000828.1 MGP_BALBcJ_G0000760.1 mouse_genomes_project 10 117497940 117500635 + TEC TEC MGP_BALBcJ_T0026030.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835018 77845024 + MGP_BALBcJ_P0026030 Ptbp1 protein_coding protein_coding MGP_BALBcJ_T0026031.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835196 77840304 + Ptbp1 protein_coding retained_intron MGP_BALBcJ_T0026032.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835220 77846075 + MGP_BALBcJ_P0026032 Ptbp1 protein_coding protein_coding MGP_BALBcJ_T0026033.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835224 77844410 + Ptbp1 protein_coding retained_intron MGP_BALBcJ_T0026034.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835232 77840205 + Ptbp1 protein_coding processed_transcript MGP_BALBcJ_T0026035.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835243 77844016 + MGP_BALBcJ_P0026035 Ptbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026036.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835256 77839606 + MGP_BALBcJ_P0026036 Ptbp1 protein_coding protein_coding MGP_BALBcJ_T0026037.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835258 77839636 + Ptbp1 protein_coding processed_transcript MGP_BALBcJ_T0026038.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835258 77839956 + MGP_BALBcJ_P0026038 Ptbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026039.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835259 77844951 + MGP_BALBcJ_P0026039 Ptbp1 protein_coding protein_coding MGP_BALBcJ_T0026040.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77835629 77839688 + MGP_BALBcJ_P0026040 Ptbp1 protein_coding protein_coding MGP_BALBcJ_T0026041.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77839363 77839979 + MGP_BALBcJ_P0026041 Ptbp1 protein_coding protein_coding MGP_BALBcJ_T0026042.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77839585 77840717 + Ptbp1 protein_coding retained_intron MGP_BALBcJ_T0026043.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77840241 77843645 + MGP_BALBcJ_P0026043 Ptbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026045.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77842329 77843642 + Ptbp1 protein_coding retained_intron MGP_BALBcJ_T0026046.1 MGP_BALBcJ_G0017403.1 mouse_genomes_project 10 77842608 77845024 + Ptbp1 protein_coding retained_intron MGP_BALBcJ_T0011249.1 MGP_BALBcJ_G0009374.1 mouse_genomes_project 10 48617604 48617894 - Gm23883 misc_RNA misc_RNA MGP_BALBcJ_T0024786.1 MGP_BALBcJ_G0017041.1 mouse_genomes_project 10 23516748 23517941 + MGP_BALBcJ_P0024786 Gm9767 protein_coding protein_coding MGP_BALBcJ_T0024955.1 MGP_BALBcJ_G0017107.1 mouse_genomes_project 10 38483436 38538758 + MGP_BALBcJ_P0024955 Wasf1 protein_coding protein_coding MGP_BALBcJ_T0024956.1 MGP_BALBcJ_G0017107.1 mouse_genomes_project 10 38483788 38538759 + MGP_BALBcJ_P0024956 Wasf1 protein_coding protein_coding MGP_BALBcJ_T0006084.1 MGP_BALBcJ_G0005094.1 mouse_genomes_project 10 70940159 71062106 - Gm15398 lincRNA lincRNA MGP_BALBcJ_T0006123.1 MGP_BALBcJ_G0005115.1 mouse_genomes_project 10 101564522 101565385 - Gm17028 lincRNA lincRNA MGP_BALBcJ_T0017061.1 MGP_BALBcJ_G0015070.1 mouse_genomes_project 10 34596990 34600975 + 5930403N24Rik processed_transcript retained_intron MGP_BALBcJ_T0017062.1 MGP_BALBcJ_G0015070.1 mouse_genomes_project 10 34597146 34599288 + 5930403N24Rik processed_transcript processed_transcript MGP_BALBcJ_T0017063.1 MGP_BALBcJ_G0015070.1 mouse_genomes_project 10 34597502 34608880 + 5930403N24Rik processed_transcript lincRNA MGP_BALBcJ_T0026453.1 MGP_BALBcJ_G0017503.1 mouse_genomes_project 10 79530762 79536634 - Gna15 protein_coding retained_intron MGP_BALBcJ_T0026454.1 MGP_BALBcJ_G0017503.1 mouse_genomes_project 10 79530769 79552629 - MGP_BALBcJ_P0026454 Gna15 protein_coding protein_coding MGP_BALBcJ_T0026455.1 MGP_BALBcJ_G0017503.1 mouse_genomes_project 10 79531543 79541357 - Gna15 protein_coding retained_intron MGP_BALBcJ_T0026645.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85179088 85352005 - MGP_BALBcJ_P0026645 Stab2 protein_coding protein_coding MGP_BALBcJ_T0026646.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85179211 85233836 - MGP_BALBcJ_P0026646 Stab2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026647.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85212761 85220349 - Stab2 protein_coding retained_intron MGP_BALBcJ_T0026648.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85214730 85227981 - Stab2 protein_coding retained_intron MGP_BALBcJ_T0026649.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85260504 85282418 - Stab2 protein_coding processed_transcript MGP_BALBcJ_T0026650.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85332831 85351992 - Stab2 protein_coding processed_transcript MGP_BALBcJ_T0026651.1 MGP_BALBcJ_G0017558.1 mouse_genomes_project 10 85334520 85352002 - Stab2 protein_coding processed_transcript MGP_BALBcJ_T0027491.1 MGP_BALBcJ_G0017821.1 mouse_genomes_project 10 127609127 127620000 + MGP_BALBcJ_P0027491 Mmp19 protein_coding protein_coding MGP_BALBcJ_T0099193.1 MGP_BALBcJ_G0037229.1 mouse_genomes_project 10 60533007 60533113 - Gm26479 snRNA snRNA MGP_BALBcJ_T0026282.1 MGP_BALBcJ_G0017459.1 mouse_genomes_project 10 78803667 78810394 + MGP_BALBcJ_P0026282 Sf3a2 protein_coding protein_coding MGP_BALBcJ_T0026283.1 MGP_BALBcJ_G0017459.1 mouse_genomes_project 10 78804201 78809477 + MGP_BALBcJ_P0026283 Sf3a2 protein_coding protein_coding MGP_BALBcJ_T0026284.1 MGP_BALBcJ_G0017459.1 mouse_genomes_project 10 78804438 78807871 + MGP_BALBcJ_P0026284 Sf3a2 protein_coding protein_coding MGP_BALBcJ_T0026285.1 MGP_BALBcJ_G0017459.1 mouse_genomes_project 10 78807969 78809487 + Sf3a2 protein_coding retained_intron MGP_BALBcJ_T0027304.1 MGP_BALBcJ_G0017758.1 mouse_genomes_project 10 126089363 126101666 - MGP_BALBcJ_P0027304 Gli1 protein_coding protein_coding MGP_BALBcJ_T0026352.1 MGP_BALBcJ_G0017480.1 mouse_genomes_project 10 79201008 79201883 - MGP_BALBcJ_P0026352 4930442H23Rik protein_coding protein_coding MGP_BALBcJ_T0025939.1 MGP_BALBcJ_G0017364.1 mouse_genomes_project 10 76355324 76358597 - MGP_BALBcJ_P0025939 Gm9978 protein_coding protein_coding MGP_BALBcJ_T0024331.1 MGP_BALBcJ_G0016907.1 mouse_genomes_project 10 130360 144450 - MGP_BALBcJ_P0024331 H60c protein_coding protein_coding MGP_BALBcJ_T0024747.1 MGP_BALBcJ_G0017029.1 mouse_genomes_project 10 21501119 21502166 - MGP_BALBcJ_P0024747 Taar9 protein_coding protein_coding MGP_BALBcJ_T0026315.1 MGP_BALBcJ_G0017472.1 mouse_genomes_project 10 79038232 79047125 - MGP_BALBcJ_P0026315 Slc39a3 protein_coding protein_coding MGP_BALBcJ_T0026316.1 MGP_BALBcJ_G0017472.1 mouse_genomes_project 10 79038234 79047007 - MGP_BALBcJ_P0026316 Slc39a3 protein_coding protein_coding MGP_BALBcJ_T0026317.1 MGP_BALBcJ_G0017472.1 mouse_genomes_project 10 79038235 79043611 - MGP_BALBcJ_P0026317 Slc39a3 protein_coding protein_coding MGP_BALBcJ_T0026318.1 MGP_BALBcJ_G0017472.1 mouse_genomes_project 10 79043555 79046981 - Slc39a3 protein_coding processed_transcript MGP_BALBcJ_T0026319.1 MGP_BALBcJ_G0017472.1 mouse_genomes_project 10 79043581 79046949 - Slc39a3 protein_coding processed_transcript MGP_BALBcJ_T0025610.1 MGP_BALBcJ_G0017283.1 mouse_genomes_project 10 70385363 70405401 + MGP_BALBcJ_P0025610 Zwint protein_coding protein_coding MGP_BALBcJ_T0025611.1 MGP_BALBcJ_G0017283.1 mouse_genomes_project 10 70385413 70400222 + MGP_BALBcJ_P0025611 Zwint protein_coding protein_coding MGP_BALBcJ_T0025612.1 MGP_BALBcJ_G0017283.1 mouse_genomes_project 10 70385414 70399598 + MGP_BALBcJ_P0025612 Zwint protein_coding protein_coding MGP_BALBcJ_T0025613.1 MGP_BALBcJ_G0017283.1 mouse_genomes_project 10 70385961 70387117 + Zwint protein_coding retained_intron MGP_BALBcJ_T0025614.1 MGP_BALBcJ_G0017283.1 mouse_genomes_project 10 70386755 70387907 + Zwint protein_coding retained_intron MGP_BALBcJ_T0025615.1 MGP_BALBcJ_G0017283.1 mouse_genomes_project 10 70387109 70404761 + Zwint protein_coding processed_transcript MGP_BALBcJ_T0003023.1 MGP_BALBcJ_G0002826.1 mouse_genomes_project 10 60904813 60905899 - 1700120B22Rik antisense antisense MGP_BALBcJ_T0098812.1 MGP_BALBcJ_G0036865.1 mouse_genomes_project 10 78590602 78592431 - Gm29093 sense_intronic sense_intronic MGP_BALBcJ_T0009562.1 MGP_BALBcJ_G0007687.1 mouse_genomes_project 10 58536976 58537098 + Mir466j miRNA miRNA MGP_BALBcJ_T0002993.1 MGP_BALBcJ_G0002803.1 mouse_genomes_project 10 11704008 11708046 + Gm16234 antisense antisense MGP_BALBcJ_T0026306.1 MGP_BALBcJ_G0017469.1 mouse_genomes_project 10 78939519 78941633 + MGP_BALBcJ_P0026306 Gadd45b protein_coding protein_coding MGP_BALBcJ_T0026737.1 MGP_BALBcJ_G0017579.1 mouse_genomes_project 10 87920971 87971490 - MGP_BALBcJ_P0026737 Slc17a8 protein_coding protein_coding MGP_BALBcJ_T0026738.1 MGP_BALBcJ_G0017579.1 mouse_genomes_project 10 87923262 87948580 - MGP_BALBcJ_P0026738 Slc17a8 protein_coding protein_coding MGP_BALBcJ_T0027041.1 MGP_BALBcJ_G0017668.1 mouse_genomes_project 10 110792385 110979153 + MGP_BALBcJ_P0027041 Kcnc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0099221.1 MGP_BALBcJ_G0037257.1 mouse_genomes_project 10 113553120 113553227 + Gm22070 snRNA snRNA MGP_BALBcJ_T0026272.1 MGP_BALBcJ_G0017455.1 mouse_genomes_project 10 78707860 78710550 + MGP_BALBcJ_P0026272 Izumo4 protein_coding protein_coding MGP_BALBcJ_T0012414.1 MGP_BALBcJ_G0010511.1 mouse_genomes_project 10 102129578 102130813 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024783.1 MGP_BALBcJ_G0017039.1 mouse_genomes_project 10 22985497 22994019 - MGP_BALBcJ_P0024783 Smlr1 protein_coding protein_coding MGP_BALBcJ_T0024784.1 MGP_BALBcJ_G0017039.1 mouse_genomes_project 10 22989802 22993894 - Smlr1 protein_coding retained_intron MGP_BALBcJ_T0012392.1 MGP_BALBcJ_G0010489.1 mouse_genomes_project 10 58901376 58901823 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026137.1 MGP_BALBcJ_G0017424.1 mouse_genomes_project 10 78123930 78127700 + Atp5d protein_coding processed_transcript MGP_BALBcJ_T0026138.1 MGP_BALBcJ_G0017424.1 mouse_genomes_project 10 78124846 78131122 + MGP_BALBcJ_P0026138 Atp5d protein_coding unknown_likely_coding MGP_BALBcJ_T0026139.1 MGP_BALBcJ_G0017424.1 mouse_genomes_project 10 78126756 78131113 + MGP_BALBcJ_P0026139 Atp5d protein_coding protein_coding MGP_BALBcJ_T0026140.1 MGP_BALBcJ_G0017424.1 mouse_genomes_project 10 78127614 78131118 + MGP_BALBcJ_P0026140 Atp5d protein_coding protein_coding MGP_BALBcJ_T0026141.1 MGP_BALBcJ_G0017424.1 mouse_genomes_project 10 78127669 78131112 + MGP_BALBcJ_P0026141 Atp5d protein_coding protein_coding MGP_BALBcJ_T0026074.1 MGP_BALBcJ_G0017411.1 mouse_genomes_project 10 77900660 77904429 + MGP_BALBcJ_P0026074 Kiss1r protein_coding unknown_likely_coding MGP_BALBcJ_T0099208.1 MGP_BALBcJ_G0037244.1 mouse_genomes_project 10 88807403 88807498 + Gm22602 snRNA snRNA MGP_BALBcJ_T0099216.1 MGP_BALBcJ_G0037252.1 mouse_genomes_project 10 103531093 103531261 + Gm25587 snRNA snRNA MGP_BALBcJ_T0026966.1 MGP_BALBcJ_G0017641.1 mouse_genomes_project 10 101581743 101773807 - MGP_BALBcJ_P0026966 Lrriq1 protein_coding unknown_likely_coding MGP_BALBcJ_T0026967.1 MGP_BALBcJ_G0017641.1 mouse_genomes_project 10 101599125 101774013 - MGP_BALBcJ_P0026967 Lrriq1 protein_coding protein_coding MGP_BALBcJ_T0026968.1 MGP_BALBcJ_G0017641.1 mouse_genomes_project 10 101751712 101774013 - MGP_BALBcJ_P0026968 Lrriq1 protein_coding protein_coding MGP_BALBcJ_T0026969.1 MGP_BALBcJ_G0017641.1 mouse_genomes_project 10 101752642 101773984 - MGP_BALBcJ_P0026969 Lrriq1 protein_coding protein_coding MGP_BALBcJ_T0100464.1 MGP_BALBcJ_G0038500.1 mouse_genomes_project 10 106833054 106833188 + Gm23105 snoRNA snoRNA MGP_BALBcJ_T0027516.1 MGP_BALBcJ_G0017833.1 mouse_genomes_project 10 127807524 127808497 + MGP_BALBcJ_P0027516 Olfr9 protein_coding protein_coding MGP_BALBcJ_T0024332.1 MGP_BALBcJ_G0016908.1 mouse_genomes_project 10 241630 345056 + MGP_BALBcJ_P0024332 Ppp1r14c protein_coding protein_coding MGP_BALBcJ_T0027396.1 MGP_BALBcJ_G0017787.1 mouse_genomes_project 10 126881076 126920688 + MGP_BALBcJ_P0027396 Baz2a protein_coding protein_coding MGP_BALBcJ_T0027397.1 MGP_BALBcJ_G0017787.1 mouse_genomes_project 10 126885343 126918363 + MGP_BALBcJ_P0027397 Baz2a protein_coding unknown_likely_coding MGP_BALBcJ_T0026829.1 MGP_BALBcJ_G0017594.1 mouse_genomes_project 10 91907877 91925419 - MGP_BALBcJ_P0026829 Amdhd1 protein_coding protein_coding MGP_BALBcJ_T0024869.1 MGP_BALBcJ_G0017077.1 mouse_genomes_project 10 31585626 31642194 - MGP_BALBcJ_P0024869 Dse protein_coding protein_coding MGP_BALBcJ_T0027141.1 MGP_BALBcJ_G0017706.1 mouse_genomes_project 10 117083232 117088081 + MGP_BALBcJ_P0027141 Ifng protein_coding protein_coding MGP_BALBcJ_T0027492.1 MGP_BALBcJ_G0017822.1 mouse_genomes_project 10 127619206 127622824 - MGP_BALBcJ_P0027492 Tmem198b protein_coding unknown_likely_coding MGP_BALBcJ_T0027493.1 MGP_BALBcJ_G0017822.1 mouse_genomes_project 10 127619280 127623137 - MGP_BALBcJ_P0027493 Tmem198b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027494.1 MGP_BALBcJ_G0017822.1 mouse_genomes_project 10 127620016 127622893 - MGP_BALBcJ_P0027494 Tmem198b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024744.1 MGP_BALBcJ_G0017026.1 mouse_genomes_project 10 21442205 21443282 + MGP_BALBcJ_P0024744 protein_coding protein_coding MGP_BALBcJ_T0003060.1 MGP_BALBcJ_G0002856.1 mouse_genomes_project 10 86169499 86171485 - Igf1os antisense antisense MGP_BALBcJ_T0003061.1 MGP_BALBcJ_G0002856.1 mouse_genomes_project 10 86169511 86208230 - Igf1os antisense antisense MGP_BALBcJ_T0002992.1 MGP_BALBcJ_G0002802.1 mouse_genomes_project 10 11178927 11183635 - Gm28289 antisense antisense MGP_BALBcJ_T0026256.1 MGP_BALBcJ_G0017449.1 mouse_genomes_project 10 78605828 78610603 + MGP_BALBcJ_P0026256 Adat3 protein_coding protein_coding MGP_BALBcJ_T0026259.1 MGP_BALBcJ_G0017449.1 mouse_genomes_project 10 78608983 78618731 + MGP_BALBcJ_P0026259 Adat3 protein_coding protein_coding MGP_BALBcJ_T0026693.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86795260 86821037 - MGP_BALBcJ_P0026693 Chpt1 protein_coding protein_coding MGP_BALBcJ_T0026694.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86795519 86825467 - MGP_BALBcJ_P0026694 Chpt1 protein_coding protein_coding MGP_BALBcJ_T0026698.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86813022 86848414 - MGP_BALBcJ_P0026698 Chpt1 protein_coding protein_coding MGP_BALBcJ_T0026699.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86817015 86848340 - MGP_BALBcJ_P0026699 Chpt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026700.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86817413 86848311 - MGP_BALBcJ_P0026700 Chpt1 protein_coding protein_coding MGP_BALBcJ_T0026701.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86817413 86848094 - MGP_BALBcJ_P0026701 Chpt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026702.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86817435 86848230 - MGP_BALBcJ_P0026702 Chpt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026703.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86830995 86848259 - MGP_BALBcJ_P0026703 Chpt1 protein_coding protein_coding MGP_BALBcJ_T0026704.1 MGP_BALBcJ_G0017569.1 mouse_genomes_project 10 86832444 86848266 - MGP_BALBcJ_P0026704 Chpt1 protein_coding protein_coding MGP_BALBcJ_T0099166.1 MGP_BALBcJ_G0037202.1 mouse_genomes_project 10 7055397 7055561 + Gm25682 snRNA snRNA MGP_BALBcJ_T0006073.1 MGP_BALBcJ_G0005087.1 mouse_genomes_project 10 61016084 61029132 + Gm16145 lincRNA lincRNA MGP_BALBcJ_T0027306.1 MGP_BALBcJ_G0017760.1 mouse_genomes_project 10 126117209 126134248 - MGP_BALBcJ_P0027306 Inhbc protein_coding protein_coding MGP_BALBcJ_T0026840.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92238677 92270689 - MGP_BALBcJ_P0026840 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026841.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92240015 92244517 - Metap2 protein_coding retained_intron MGP_BALBcJ_T0026842.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92241115 92272081 - MGP_BALBcJ_P0026842 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026843.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92241116 92270650 - MGP_BALBcJ_P0026843 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026844.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92241116 92270659 - MGP_BALBcJ_P0026844 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026845.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92241768 92252102 - MGP_BALBcJ_P0026845 Metap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026846.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92242444 92244452 - Metap2 protein_coding retained_intron MGP_BALBcJ_T0026847.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92242444 92245979 - MGP_BALBcJ_P0026847 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026848.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92249285 92251960 - Metap2 protein_coding retained_intron MGP_BALBcJ_T0026849.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92249382 92270491 - MGP_BALBcJ_P0026849 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026850.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92250639 92270689 - MGP_BALBcJ_P0026850 Metap2 protein_coding protein_coding MGP_BALBcJ_T0026851.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92260170 92270603 - Metap2 protein_coding retained_intron MGP_BALBcJ_T0026852.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92260249 92270636 - Metap2 protein_coding retained_intron MGP_BALBcJ_T0026853.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92270565 92271173 - Metap2 protein_coding processed_transcript MGP_BALBcJ_T0026854.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92270802 92272008 - Metap2 protein_coding processed_transcript MGP_BALBcJ_T0026855.1 MGP_BALBcJ_G0017600.1 mouse_genomes_project 10 92270919 92278400 - Metap2 protein_coding processed_transcript MGP_BALBcJ_T0026993.1 MGP_BALBcJ_G0017651.1 mouse_genomes_project 10 105994053 106192749 - MGP_BALBcJ_P0026993 Ptprq protein_coding protein_coding MGP_BALBcJ_T0098303.1 MGP_BALBcJ_G0036357.1 mouse_genomes_project 10 68027753 68030369 - pseudogene pseudogene MGP_BALBcJ_T0100465.1 MGP_BALBcJ_G0038501.1 mouse_genomes_project 10 109271266 109271394 + Gm23698 snoRNA snoRNA MGP_BALBcJ_T0025492.1 MGP_BALBcJ_G0017263.1 mouse_genomes_project 10 65291474 65293696 + MGP_BALBcJ_P0025492 Gm10797 protein_coding protein_coding MGP_BALBcJ_T0099222.1 MGP_BALBcJ_G0037258.1 mouse_genomes_project 10 122157172 122157356 + Gm22958 snRNA snRNA MGP_BALBcJ_T0006052.1 MGP_BALBcJ_G0005069.1 mouse_genomes_project 10 18550594 18558472 + 1700021A07Rik lincRNA lincRNA MGP_BALBcJ_T0006053.1 MGP_BALBcJ_G0005069.1 mouse_genomes_project 10 18550682 18557651 + 1700021A07Rik lincRNA lincRNA MGP_BALBcJ_T0006054.1 MGP_BALBcJ_G0005069.1 mouse_genomes_project 10 18557246 18557555 + 1700021A07Rik lincRNA lincRNA MGP_BALBcJ_T0024726.1 MGP_BALBcJ_G0017012.1 mouse_genomes_project 10 21165064 21168992 - MGP_BALBcJ_P0024726 Rps12 protein_coding protein_coding MGP_BALBcJ_T0026355.1 MGP_BALBcJ_G0017482.1 mouse_genomes_project 10 79217076 79220944 - MGP_BALBcJ_P0026355 Nmrk2 protein_coding protein_coding MGP_BALBcJ_T0009583.1 MGP_BALBcJ_G0007708.1 mouse_genomes_project 10 79293915 79294006 + Mir3057 miRNA miRNA MGP_BALBcJ_T0024867.1 MGP_BALBcJ_G0017075.1 mouse_genomes_project 10 31520793 31525961 - MGP_BALBcJ_P0024867 Fam26e protein_coding protein_coding MGP_BALBcJ_T0025119.1 MGP_BALBcJ_G0017157.1 mouse_genomes_project 10 49762494 49768464 + MGP_BALBcJ_P0025119 Vgll2 protein_coding protein_coding MGP_BALBcJ_T0025120.1 MGP_BALBcJ_G0017157.1 mouse_genomes_project 10 49762520 49768336 + MGP_BALBcJ_P0025120 Vgll2 protein_coding protein_coding MGP_BALBcJ_T0003007.1 MGP_BALBcJ_G0002813.1 mouse_genomes_project 10 37927824 37929420 - Cdk19os antisense antisense MGP_BALBcJ_T0003008.1 MGP_BALBcJ_G0002813.1 mouse_genomes_project 10 37928408 37929420 - Cdk19os antisense antisense MGP_BALBcJ_T0006044.1 MGP_BALBcJ_G0005063.1 mouse_genomes_project 10 6938465 7103000 + Gm28905 lincRNA lincRNA MGP_BALBcJ_T0024870.1 MGP_BALBcJ_G0017078.1 mouse_genomes_project 10 31716876 31719952 + MGP_BALBcJ_P0024870 Tspyl1 protein_coding protein_coding MGP_BALBcJ_T0024382.1 MGP_BALBcJ_G0016922.1 mouse_genomes_project 10 2710786 2717217 - MGP_BALBcJ_P0024382 Fbxo5 protein_coding protein_coding MGP_BALBcJ_T0024383.1 MGP_BALBcJ_G0016922.1 mouse_genomes_project 10 2713826 2716227 - Fbxo5 protein_coding processed_transcript MGP_BALBcJ_T0025359.1 MGP_BALBcJ_G0017232.1 mouse_genomes_project 10 59867960 59881411 + MGP_BALBcJ_P0025359 Tacr2 protein_coding protein_coding MGP_BALBcJ_T0025993.1 MGP_BALBcJ_G0017390.1 mouse_genomes_project 10 77643437 77647400 + MGP_BALBcJ_P0025993 Madcam1 protein_coding protein_coding MGP_BALBcJ_T0025121.1 MGP_BALBcJ_G0017158.1 mouse_genomes_project 10 49787291 49931023 - MGP_BALBcJ_P0025121 Ros1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025122.1 MGP_BALBcJ_G0017158.1 mouse_genomes_project 10 49787496 49931311 - MGP_BALBcJ_P0025122 Ros1 protein_coding protein_coding MGP_BALBcJ_T0025123.1 MGP_BALBcJ_G0017158.1 mouse_genomes_project 10 49787586 49931023 - MGP_BALBcJ_P0025123 Ros1 protein_coding protein_coding MGP_BALBcJ_T0025124.1 MGP_BALBcJ_G0017158.1 mouse_genomes_project 10 49787586 49931023 - MGP_BALBcJ_P0025124 Ros1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100458.1 MGP_BALBcJ_G0038494.1 mouse_genomes_project 10 96210437 96210565 - Gm25658 snoRNA snoRNA MGP_BALBcJ_T0003028.1 MGP_BALBcJ_G0002830.1 mouse_genomes_project 10 73718936 73721892 - Gm867 antisense antisense MGP_BALBcJ_T0012391.1 MGP_BALBcJ_G0010488.1 mouse_genomes_project 10 57233797 57234046 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006066.1 MGP_BALBcJ_G0005080.1 mouse_genomes_project 10 40383439 40385479 - Gm26860 lincRNA lincRNA MGP_BALBcJ_T0012404.1 MGP_BALBcJ_G0010501.1 mouse_genomes_project 10 73751130 73751404 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027305.1 MGP_BALBcJ_G0017759.1 mouse_genomes_project 10 126110291 126112650 - MGP_BALBcJ_P0027305 Inhbe protein_coding protein_coding MGP_BALBcJ_T0025871.1 MGP_BALBcJ_G0017347.1 mouse_genomes_project 10 75676289 75676964 - MGP_BALBcJ_P0025871 protein_coding protein_coding MGP_BALBcJ_T0026322.1 MGP_BALBcJ_G0017474.1 mouse_genomes_project 10 79079762 79092284 + MGP_BALBcJ_P0026322 Thop1 protein_coding protein_coding MGP_BALBcJ_T0026323.1 MGP_BALBcJ_G0017474.1 mouse_genomes_project 10 79079854 79084602 + Thop1 protein_coding retained_intron MGP_BALBcJ_T0026324.1 MGP_BALBcJ_G0017474.1 mouse_genomes_project 10 79079886 79088329 + Thop1 protein_coding processed_transcript MGP_BALBcJ_T0026325.1 MGP_BALBcJ_G0017474.1 mouse_genomes_project 10 79083003 79088480 + Thop1 protein_coding retained_intron MGP_BALBcJ_T0026326.1 MGP_BALBcJ_G0017474.1 mouse_genomes_project 10 79088592 79089804 + Thop1 protein_coding retained_intron MGP_BALBcJ_T0027100.1 MGP_BALBcJ_G0017690.1 mouse_genomes_project 10 115641872 115643300 + MGP_BALBcJ_P0027100 Lrrc10 protein_coding protein_coding MGP_BALBcJ_T0100444.1 MGP_BALBcJ_G0038480.1 mouse_genomes_project 10 57362107 57362239 - Gm23803 snoRNA snoRNA MGP_BALBcJ_T0026910.1 MGP_BALBcJ_G0017620.1 mouse_genomes_project 10 96075244 96081728 + MGP_BALBcJ_P0026910 Kera protein_coding protein_coding MGP_BALBcJ_T0024749.1 MGP_BALBcJ_G0017031.1 mouse_genomes_project 10 21614748 21694396 + MGP_BALBcJ_P0024749 Moxd1 protein_coding protein_coding MGP_BALBcJ_T0024750.1 MGP_BALBcJ_G0017031.1 mouse_genomes_project 10 21614776 21622476 + Moxd1 protein_coding processed_transcript MGP_BALBcJ_T0024346.1 MGP_BALBcJ_G0016912.1 mouse_genomes_project 10 1156546 1251512 + MGP_BALBcJ_P0024346 Akap12 protein_coding protein_coding MGP_BALBcJ_T0024380.1 MGP_BALBcJ_G0016920.1 mouse_genomes_project 10 2493244 2506165 + MGP_BALBcJ_P0024380 Myct1 protein_coding protein_coding MGP_BALBcJ_T0025336.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59444545 59484694 - Col13a1 protein_coding processed_transcript MGP_BALBcJ_T0025337.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59444545 59586552 - MGP_BALBcJ_P0025337 Col13a1 protein_coding protein_coding MGP_BALBcJ_T0025338.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59444545 59586587 - MGP_BALBcJ_P0025338 Col13a1 protein_coding protein_coding MGP_BALBcJ_T0025339.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59444545 59472717 - MGP_BALBcJ_P0025339 Col13a1 protein_coding protein_coding MGP_BALBcJ_T0025340.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59444545 59586552 - MGP_BALBcJ_P0025340 Col13a1 protein_coding protein_coding MGP_BALBcJ_T0025341.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59445015 59586115 - MGP_BALBcJ_P0025341 Col13a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0025342.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59445015 59586115 - MGP_BALBcJ_P0025342 Col13a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0025343.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59455035 59585600 - Col13a1 protein_coding retained_intron MGP_BALBcJ_T0025344.1 MGP_BALBcJ_G0017227.1 mouse_genomes_project 10 59455164 59457829 - Col13a1 protein_coding retained_intron MGP_BALBcJ_T0003020.1 MGP_BALBcJ_G0002823.1 mouse_genomes_project 10 60199210 60200586 + 4933428P19Rik antisense antisense MGP_BALBcJ_T0026064.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77876602 77890909 - MGP_BALBcJ_P0026064 Med16 protein_coding protein_coding MGP_BALBcJ_T0026065.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77876808 77890886 - MGP_BALBcJ_P0026065 Med16 protein_coding protein_coding MGP_BALBcJ_T0026066.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77880058 77881508 - Med16 protein_coding retained_intron MGP_BALBcJ_T0026067.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77883660 77890806 - Med16 protein_coding retained_intron MGP_BALBcJ_T0026068.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77885001 77890898 - MGP_BALBcJ_P0026068 Med16 protein_coding protein_coding MGP_BALBcJ_T0026069.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77885177 77890309 - MGP_BALBcJ_P0026069 Med16 protein_coding protein_coding MGP_BALBcJ_T0026070.1 MGP_BALBcJ_G0017408.1 mouse_genomes_project 10 77885204 77890911 - MGP_BALBcJ_P0026070 Med16 protein_coding protein_coding MGP_BALBcJ_T0027029.1 MGP_BALBcJ_G0017664.1 mouse_genomes_project 10 110472662 110488368 + MGP_BALBcJ_P0027029 Krr1 protein_coding protein_coding MGP_BALBcJ_T0027030.1 MGP_BALBcJ_G0017664.1 mouse_genomes_project 10 110472755 110476468 + Krr1 protein_coding retained_intron MGP_BALBcJ_T0027031.1 MGP_BALBcJ_G0017664.1 mouse_genomes_project 10 110472773 110486783 + Krr1 protein_coding retained_intron MGP_BALBcJ_T0027032.1 MGP_BALBcJ_G0017664.1 mouse_genomes_project 10 110472791 110484570 + MGP_BALBcJ_P0027032 Krr1 protein_coding protein_coding MGP_BALBcJ_T0027526.1 MGP_BALBcJ_G0017840.1 mouse_genomes_project 10 128017974 128018910 - MGP_BALBcJ_P0027526 Olfr772 protein_coding protein_coding MGP_BALBcJ_T0098708.1 MGP_BALBcJ_G0036762.1 mouse_genomes_project 10 1932322 1932604 - Gm25694 ribozyme ribozyme MGP_BALBcJ_T0102123.1 MGP_BALBcJ_G0039940.1 mouse_genomes_project 10 128455827 128456719 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099185.1 MGP_BALBcJ_G0037221.1 mouse_genomes_project 10 44523790 44523952 - Gm25650 snRNA snRNA MGP_BALBcJ_T0027054.1 MGP_BALBcJ_G0017677.1 mouse_genomes_project 10 113955574 114003384 + MGP_BALBcJ_P0027054 Zfc3h1 protein_coding protein_coding MGP_BALBcJ_T0027055.1 MGP_BALBcJ_G0017677.1 mouse_genomes_project 10 113997974 114003383 + Zfc3h1 protein_coding retained_intron MGP_BALBcJ_T0027056.1 MGP_BALBcJ_G0017677.1 mouse_genomes_project 10 113999176 114001486 + Zfc3h1 protein_coding retained_intron MGP_BALBcJ_T0027057.1 MGP_BALBcJ_G0017677.1 mouse_genomes_project 10 114001690 114002374 + Zfc3h1 protein_coding retained_intron MGP_BALBcJ_T0009576.1 MGP_BALBcJ_G0007701.1 mouse_genomes_project 10 77843178 77843244 + Mir6910 miRNA miRNA MGP_BALBcJ_T0099226.1 MGP_BALBcJ_G0037262.1 mouse_genomes_project 10 127761992 127762092 + Gm25494 snRNA snRNA MGP_BALBcJ_T0024923.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37277244 37439980 + MGP_BALBcJ_P0024923 Rev3l protein_coding protein_coding MGP_BALBcJ_T0024924.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37277253 37439937 + MGP_BALBcJ_P0024924 Rev3l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024925.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37277490 37439975 + MGP_BALBcJ_P0024925 Rev3l protein_coding protein_coding MGP_BALBcJ_T0024926.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37389584 37439977 + MGP_BALBcJ_P0024926 Rev3l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024927.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37392727 37407594 + Rev3l protein_coding retained_intron MGP_BALBcJ_T0024928.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37423695 37427741 + Rev3l protein_coding retained_intron MGP_BALBcJ_T0024929.1 MGP_BALBcJ_G0017093.1 mouse_genomes_project 10 37431877 37439257 + Rev3l protein_coding retained_intron MGP_BALBcJ_T0024577.1 MGP_BALBcJ_G0016962.1 mouse_genomes_project 10 10992067 11180433 + MGP_BALBcJ_P0024577 Hivep2 protein_coding protein_coding MGP_BALBcJ_T0024578.1 MGP_BALBcJ_G0016962.1 mouse_genomes_project 10 10992371 11181219 + MGP_BALBcJ_P0024578 Hivep2 protein_coding protein_coding MGP_BALBcJ_T0024579.1 MGP_BALBcJ_G0016962.1 mouse_genomes_project 10 10992371 11181218 + MGP_BALBcJ_P0024579 Hivep2 protein_coding protein_coding MGP_BALBcJ_T0024580.1 MGP_BALBcJ_G0016962.1 mouse_genomes_project 10 10992636 11158653 + MGP_BALBcJ_P0024580 Hivep2 protein_coding protein_coding MGP_BALBcJ_T0024581.1 MGP_BALBcJ_G0016962.1 mouse_genomes_project 10 10993623 11108599 + Hivep2 protein_coding processed_transcript MGP_BALBcJ_T0027544.1 MGP_BALBcJ_G0017854.1 mouse_genomes_project 10 128397448 128398518 + MGP_BALBcJ_P0027544 Olfr790 protein_coding protein_coding MGP_BALBcJ_T0026353.1 MGP_BALBcJ_G0017481.1 mouse_genomes_project 10 79201410 79212104 + MGP_BALBcJ_P0026353 Dapk3 protein_coding protein_coding MGP_BALBcJ_T0026354.1 MGP_BALBcJ_G0017481.1 mouse_genomes_project 10 79201666 79212104 + MGP_BALBcJ_P0026354 Dapk3 protein_coding protein_coding MGP_BALBcJ_T0024829.1 MGP_BALBcJ_G0017054.1 mouse_genomes_project 10 26912477 26996090 - MGP_BALBcJ_P0024829 Rspo3 protein_coding protein_coding MGP_BALBcJ_T0025428.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60640172 60651814 + Rufy2 protein_coding retained_intron MGP_BALBcJ_T0025429.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60640188 60669835 + MGP_BALBcJ_P0025429 Rufy2 protein_coding protein_coding MGP_BALBcJ_T0025430.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60640191 60679229 + MGP_BALBcJ_P0025430 Rufy2 protein_coding protein_coding MGP_BALBcJ_T0025431.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60640201 60682484 + MGP_BALBcJ_P0025431 Rufy2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025432.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60640211 60669808 + MGP_BALBcJ_P0025432 Rufy2 protein_coding protein_coding MGP_BALBcJ_T0025433.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60640242 60667588 + MGP_BALBcJ_P0025433 Rufy2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025434.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60641377 60650691 + MGP_BALBcJ_P0025434 Rufy2 protein_coding protein_coding MGP_BALBcJ_T0025435.1 MGP_BALBcJ_G0017247.1 mouse_genomes_project 10 60667625 60673488 + Rufy2 protein_coding retained_intron MGP_BALBcJ_T0025657.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72712868 72788959 - MGP_BALBcJ_P0025657 Rsph14 protein_coding protein_coding MGP_BALBcJ_T0025658.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72712868 72788947 - MGP_BALBcJ_P0025658 Rsph14 protein_coding protein_coding MGP_BALBcJ_T0025659.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72712868 72788980 - MGP_BALBcJ_P0025659 Rsph14 protein_coding protein_coding MGP_BALBcJ_T0025660.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72715077 72788947 - MGP_BALBcJ_P0025660 Rsph14 protein_coding protein_coding MGP_BALBcJ_T0025661.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72717075 72788956 - MGP_BALBcJ_P0025661 Rsph14 protein_coding protein_coding MGP_BALBcJ_T0025665.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72778707 72788925 - MGP_BALBcJ_P0025665 Rsph14 protein_coding protein_coding MGP_BALBcJ_T0025666.1 MGP_BALBcJ_G0017285.1 mouse_genomes_project 10 72780912 72788980 - Rsph14 protein_coding retained_intron MGP_BALBcJ_T0025521.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67053345 67069649 - MGP_BALBcJ_P0025521 Cdk1 protein_coding protein_coding MGP_BALBcJ_T0025522.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67055034 67069614 - MGP_BALBcJ_P0025522 Cdk1 protein_coding protein_coding MGP_BALBcJ_T0025523.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67057309 67059440 - Cdk1 protein_coding retained_intron MGP_BALBcJ_T0025524.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67057440 67062221 - Cdk1 protein_coding retained_intron MGP_BALBcJ_T0025525.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67057476 67067541 - MGP_BALBcJ_P0025525 Cdk1 protein_coding protein_coding MGP_BALBcJ_T0025526.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67057514 67062145 - Cdk1 protein_coding retained_intron MGP_BALBcJ_T0025527.1 MGP_BALBcJ_G0017271.1 mouse_genomes_project 10 67061715 67069621 - Cdk1 protein_coding retained_intron MGP_BALBcJ_T0003017.1 MGP_BALBcJ_G0002822.1 mouse_genomes_project 10 59957655 59967237 + Hk1os antisense antisense MGP_BALBcJ_T0003018.1 MGP_BALBcJ_G0002822.1 mouse_genomes_project 10 59958006 59967898 + Hk1os antisense antisense MGP_BALBcJ_T0003019.1 MGP_BALBcJ_G0002822.1 mouse_genomes_project 10 59958021 59980729 + Hk1os antisense antisense MGP_BALBcJ_T0025952.1 MGP_BALBcJ_G0017374.1 mouse_genomes_project 10 76734953 76740178 + MGP_BALBcJ_P0025952 protein_coding protein_coding MGP_BALBcJ_T0025953.1 MGP_BALBcJ_G0017374.1 mouse_genomes_project 10 76738547 76740178 + MGP_BALBcJ_P0025953 protein_coding protein_coding MGP_BALBcJ_T0017064.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37164965 37276906 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017065.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37164967 37276905 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017066.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37166178 37276715 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017067.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37166208 37276748 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017068.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37166251 37276900 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017069.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37166267 37276713 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017070.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37166529 37276675 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017071.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37183084 37189057 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017072.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37183176 37276881 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017073.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37196802 37273080 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017074.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37197370 37276905 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017075.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37224269 37276905 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017076.1 MGP_BALBcJ_G0015071.1 mouse_genomes_project 10 37266311 37276866 - E130307A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0025159.1 MGP_BALBcJ_G0017174.1 mouse_genomes_project 10 54530954 54534075 + MGP_BALBcJ_P0025159 Gm9956 protein_coding protein_coding MGP_BALBcJ_T0024432.1 MGP_BALBcJ_G0016928.1 mouse_genomes_project 10 4029160 4045626 - MGP_BALBcJ_P0024432 Cnksr3 protein_coding protein_coding MGP_BALBcJ_T0024433.1 MGP_BALBcJ_G0016928.1 mouse_genomes_project 10 4029160 4128606 - MGP_BALBcJ_P0024433 Cnksr3 protein_coding protein_coding MGP_BALBcJ_T0027459.1 MGP_BALBcJ_G0017809.1 mouse_genomes_project 10 127355392 127361207 - MGP_BALBcJ_P0027459 Zc3h10 protein_coding protein_coding MGP_BALBcJ_T0027460.1 MGP_BALBcJ_G0017809.1 mouse_genomes_project 10 127358230 127361176 - Zc3h10 protein_coding processed_transcript MGP_BALBcJ_T0027461.1 MGP_BALBcJ_G0017809.1 mouse_genomes_project 10 127358512 127361072 - Zc3h10 protein_coding processed_transcript MGP_BALBcJ_T0027462.1 MGP_BALBcJ_G0017809.1 mouse_genomes_project 10 127358770 127361158 - Zc3h10 protein_coding processed_transcript MGP_BALBcJ_T0100418.1 MGP_BALBcJ_G0038454.1 mouse_genomes_project 10 8623948 8624078 + Gm22546 snoRNA snoRNA MGP_BALBcJ_T0027551.1 MGP_BALBcJ_G0017859.1 mouse_genomes_project 10 128555504 128556440 + MGP_BALBcJ_P0027551 Olfr799 protein_coding protein_coding MGP_BALBcJ_T0003067.1 MGP_BALBcJ_G0002861.1 mouse_genomes_project 10 109259682 109369240 - 1700020G17Rik antisense antisense MGP_BALBcJ_T0003068.1 MGP_BALBcJ_G0002861.1 mouse_genomes_project 10 109277125 109369270 - 1700020G17Rik antisense antisense MGP_BALBcJ_T0003069.1 MGP_BALBcJ_G0002861.1 mouse_genomes_project 10 109288543 109369302 - 1700020G17Rik antisense antisense MGP_BALBcJ_T0003070.1 MGP_BALBcJ_G0002861.1 mouse_genomes_project 10 109310969 109369289 - 1700020G17Rik antisense antisense MGP_BALBcJ_T0012369.1 MGP_BALBcJ_G0010466.1 mouse_genomes_project 10 19851380 19852010 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025679.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73112733 73289970 - MGP_BALBcJ_P0025679 Gucd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025683.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73183904 73283976 - MGP_BALBcJ_P0025683 Gucd1 protein_coding protein_coding MGP_BALBcJ_T0025685.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73279507 73289893 - MGP_BALBcJ_P0025685 Gucd1 protein_coding protein_coding MGP_BALBcJ_T0025686.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73281492 73289986 - MGP_BALBcJ_P0025686 Gucd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025687.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73281526 73283959 - Gucd1 protein_coding retained_intron MGP_BALBcJ_T0025688.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73281659 73289867 - MGP_BALBcJ_P0025688 Gucd1 protein_coding protein_coding MGP_BALBcJ_T0025689.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73282411 73290553 - MGP_BALBcJ_P0025689 Gucd1 protein_coding protein_coding MGP_BALBcJ_T0025690.1 MGP_BALBcJ_G0017291.1 mouse_genomes_project 10 73283874 73289957 - MGP_BALBcJ_P0025690 Gucd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027586.1 MGP_BALBcJ_G0017885.1 mouse_genomes_project 10 129114515 129115674 - MGP_BALBcJ_P0027586 protein_coding protein_coding MGP_BALBcJ_T0027104.1 MGP_BALBcJ_G0017694.1 mouse_genomes_project 10 115834479 115840897 - MGP_BALBcJ_P0027104 9530003J23Rik protein_coding protein_coding MGP_BALBcJ_T0027105.1 MGP_BALBcJ_G0017694.1 mouse_genomes_project 10 115836003 115840946 - MGP_BALBcJ_P0027105 9530003J23Rik protein_coding protein_coding MGP_BALBcJ_T0009607.1 MGP_BALBcJ_G0007732.1 mouse_genomes_project 10 121355716 121355813 + Mir6412 miRNA miRNA MGP_BALBcJ_T0027457.1 MGP_BALBcJ_G0017807.1 mouse_genomes_project 10 127306291 127310799 - MGP_BALBcJ_P0027457 Myl6b protein_coding protein_coding MGP_BALBcJ_T0003072.1 MGP_BALBcJ_G0002863.1 mouse_genomes_project 10 113364489 113379164 + Gm15723 antisense antisense MGP_BALBcJ_T0102125.1 MGP_BALBcJ_G0039942.1 mouse_genomes_project 10 128530804 128531219 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006091.1 MGP_BALBcJ_G0005099.1 mouse_genomes_project 10 79638472 79641894 - Gm26896 lincRNA lincRNA MGP_BALBcJ_T0026916.1 MGP_BALBcJ_G0017625.1 mouse_genomes_project 10 97358489 97472063 + MGP_BALBcJ_P0026916 Atp2b1 protein_coding unknown_likely_coding MGP_BALBcJ_T0026917.1 MGP_BALBcJ_G0017625.1 mouse_genomes_project 10 97358961 97472064 + MGP_BALBcJ_P0026917 Atp2b1 protein_coding protein_coding MGP_BALBcJ_T0026747.1 MGP_BALBcJ_G0017582.1 mouse_genomes_project 10 88097892 88173606 + MGP_BALBcJ_P0026747 Uhrf1bp1l protein_coding protein_coding MGP_BALBcJ_T0024599.1 MGP_BALBcJ_G0016967.1 mouse_genomes_project 10 14836093 14838539 + MGP_BALBcJ_P0024599 Cited2 protein_coding protein_coding MGP_BALBcJ_T0027284.1 MGP_BALBcJ_G0017751.1 mouse_genomes_project 10 125953158 125967714 - MGP_BALBcJ_P0027284 Pip4k2c protein_coding protein_coding MGP_BALBcJ_T0027242.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125762895 125782150 - MGP_BALBcJ_P0027242 Tsfm protein_coding protein_coding MGP_BALBcJ_T0027243.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125773678 125782187 - MGP_BALBcJ_P0027243 Tsfm protein_coding protein_coding MGP_BALBcJ_T0027244.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125773794 125776444 - Tsfm protein_coding retained_intron MGP_BALBcJ_T0027245.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125773972 125781738 - Tsfm protein_coding processed_transcript MGP_BALBcJ_T0027246.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125774254 125782106 - Tsfm protein_coding retained_intron MGP_BALBcJ_T0027247.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125775581 125782146 - MGP_BALBcJ_P0027247 Tsfm protein_coding protein_coding MGP_BALBcJ_T0027248.1 MGP_BALBcJ_G0017738.1 mouse_genomes_project 10 125780568 125782150 - Tsfm protein_coding retained_intron MGP_BALBcJ_T0024885.1 MGP_BALBcJ_G0017084.1 mouse_genomes_project 10 34433047 34461074 + MGP_BALBcJ_P0024885 Hdac2 protein_coding protein_coding MGP_BALBcJ_T0024886.1 MGP_BALBcJ_G0017084.1 mouse_genomes_project 10 34433073 34455025 + MGP_BALBcJ_P0024886 Hdac2 protein_coding protein_coding MGP_BALBcJ_T0024887.1 MGP_BALBcJ_G0017084.1 mouse_genomes_project 10 34450311 34461073 + Hdac2 protein_coding processed_transcript MGP_BALBcJ_T0024888.1 MGP_BALBcJ_G0017084.1 mouse_genomes_project 10 34457356 34460796 + Hdac2 protein_coding retained_intron MGP_BALBcJ_T0099219.1 MGP_BALBcJ_G0037255.1 mouse_genomes_project 10 109607444 109607547 - Gm22101 snRNA snRNA MGP_BALBcJ_T0025694.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73333732 73348668 + MGP_BALBcJ_P0025694 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025695.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73333783 73348715 + MGP_BALBcJ_P0025695 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025696.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73336276 73346453 + MGP_BALBcJ_P0025696 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025697.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73336283 73348668 + MGP_BALBcJ_P0025697 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025698.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73338421 73351330 + MGP_BALBcJ_P0025698 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025699.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73338426 73351778 + MGP_BALBcJ_P0025699 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025700.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73340762 73351695 + MGP_BALBcJ_P0025700 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025701.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73340769 73348715 + MGP_BALBcJ_P0025701 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025702.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73340784 73358613 + MGP_BALBcJ_P0025702 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025703.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73340785 73348467 + MGP_BALBcJ_P0025703 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025704.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73340790 73348715 + MGP_BALBcJ_P0025704 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025705.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73340802 73348382 + MGP_BALBcJ_P0025705 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025706.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73343652 73351333 + MGP_BALBcJ_P0025706 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025707.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73343657 73351773 + MGP_BALBcJ_P0025707 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025708.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73343696 73353846 + Ggt1 protein_coding processed_transcript MGP_BALBcJ_T0025709.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73345574 73358595 + MGP_BALBcJ_P0025709 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025710.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73346012 73351796 + MGP_BALBcJ_P0025710 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025711.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73348488 73357316 + MGP_BALBcJ_P0025711 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025712.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73353782 73358571 + MGP_BALBcJ_P0025712 Ggt1 protein_coding protein_coding MGP_BALBcJ_T0025713.1 MGP_BALBcJ_G0017295.1 mouse_genomes_project 10 73357517 73358604 + Ggt1 protein_coding retained_intron MGP_BALBcJ_T0024865.1 MGP_BALBcJ_G0017073.1 mouse_genomes_project 10 31467654 31540400 + MGP_BALBcJ_P0024865 Trappc3l protein_coding protein_coding MGP_BALBcJ_T0012416.1 MGP_BALBcJ_G0010513.1 mouse_genomes_project 10 104678232 104678625 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000825.1 MGP_BALBcJ_G0000757.1 mouse_genomes_project 10 112537004 112537608 + TEC TEC MGP_BALBcJ_T0009553.1 MGP_BALBcJ_G0007678.1 mouse_genomes_project 10 42046626 42046719 + Mir1929 miRNA miRNA MGP_BALBcJ_T0099225.1 MGP_BALBcJ_G0037261.1 mouse_genomes_project 10 127105739 127105845 - Gm23241 snRNA snRNA MGP_BALBcJ_T0003064.1 MGP_BALBcJ_G0002858.1 mouse_genomes_project 10 92056335 92065988 - Gm15915 antisense antisense MGP_BALBcJ_T0025836.1 MGP_BALBcJ_G0017334.1 mouse_genomes_project 10 75300810 75330555 - MGP_BALBcJ_P0025836 Fam207a protein_coding protein_coding MGP_BALBcJ_T0025461.1 MGP_BALBcJ_G0017255.1 mouse_genomes_project 10 61092536 62662912 + MGP_BALBcJ_P0025461 Ctnna3 protein_coding protein_coding MGP_BALBcJ_T0025462.1 MGP_BALBcJ_G0017255.1 mouse_genomes_project 10 61120385 62663614 + MGP_BALBcJ_P0025462 Ctnna3 protein_coding protein_coding MGP_BALBcJ_T0025463.1 MGP_BALBcJ_G0017255.1 mouse_genomes_project 10 61167203 62662780 + MGP_BALBcJ_P0025463 Ctnna3 protein_coding protein_coding MGP_BALBcJ_T0025464.1 MGP_BALBcJ_G0017255.1 mouse_genomes_project 10 61236998 61249999 + Ctnna3 protein_coding processed_transcript MGP_BALBcJ_T0025465.1 MGP_BALBcJ_G0017255.1 mouse_genomes_project 10 61475727 61733187 + Ctnna3 protein_coding processed_transcript MGP_BALBcJ_T0026780.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89352106 89447962 - MGP_BALBcJ_P0026780 Apaf1 protein_coding protein_coding MGP_BALBcJ_T0026781.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89352108 89354387 - Apaf1 protein_coding retained_intron MGP_BALBcJ_T0026782.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89352113 89448070 - MGP_BALBcJ_P0026782 Apaf1 protein_coding protein_coding MGP_BALBcJ_T0026783.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89353398 89448004 - MGP_BALBcJ_P0026783 Apaf1 protein_coding protein_coding MGP_BALBcJ_T0026784.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89359882 89364554 - Apaf1 protein_coding processed_transcript MGP_BALBcJ_T0026785.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89360883 89363865 - Apaf1 protein_coding retained_intron MGP_BALBcJ_T0026786.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89428489 89447729 - MGP_BALBcJ_P0026786 Apaf1 protein_coding protein_coding MGP_BALBcJ_T0026787.1 MGP_BALBcJ_G0017584.1 mouse_genomes_project 10 89431641 89448070 - MGP_BALBcJ_P0026787 Apaf1 protein_coding protein_coding MGP_BALBcJ_T0009544.1 MGP_BALBcJ_G0007669.1 mouse_genomes_project 10 4788334 4788428 + Mir5104 miRNA miRNA MGP_BALBcJ_T0026928.1 MGP_BALBcJ_G0017631.1 mouse_genomes_project 10 98219511 98221465 - MGP_BALBcJ_P0026928 Csl protein_coding protein_coding MGP_BALBcJ_T0027384.1 MGP_BALBcJ_G0017785.1 mouse_genomes_project 10 126845814 126864603 + MGP_BALBcJ_P0027384 Ptges3 protein_coding protein_coding MGP_BALBcJ_T0027385.1 MGP_BALBcJ_G0017785.1 mouse_genomes_project 10 126845871 126864310 + MGP_BALBcJ_P0027385 Ptges3 protein_coding protein_coding MGP_BALBcJ_T0027386.1 MGP_BALBcJ_G0017785.1 mouse_genomes_project 10 126856023 126859698 + Ptges3 protein_coding retained_intron MGP_BALBcJ_T0026655.1 MGP_BALBcJ_G0017560.1 mouse_genomes_project 10 85828091 85830935 - MGP_BALBcJ_P0026655 Ascl1 protein_coding protein_coding MGP_BALBcJ_T0027387.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126870611 126878682 + MGP_BALBcJ_P0027387 Atp5b protein_coding protein_coding MGP_BALBcJ_T0027388.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126870644 126871426 + Atp5b protein_coding processed_transcript MGP_BALBcJ_T0027389.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126871772 126873288 + Atp5b protein_coding retained_intron MGP_BALBcJ_T0027390.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126873084 126878451 + Atp5b protein_coding retained_intron MGP_BALBcJ_T0027391.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126873568 126877443 + Atp5b protein_coding processed_transcript MGP_BALBcJ_T0027392.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126875971 126877342 + Atp5b protein_coding retained_intron MGP_BALBcJ_T0027393.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126876781 126877972 + Atp5b protein_coding retained_intron MGP_BALBcJ_T0027394.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126876842 126878564 + Atp5b protein_coding processed_transcript MGP_BALBcJ_T0027395.1 MGP_BALBcJ_G0017786.1 mouse_genomes_project 10 126877331 126878563 + Atp5b protein_coding processed_transcript MGP_BALBcJ_T0012386.1 MGP_BALBcJ_G0010483.1 mouse_genomes_project 10 49853880 49854431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025317.1 MGP_BALBcJ_G0017217.1 mouse_genomes_project 10 59021634 59029283 + MGP_BALBcJ_P0025317 Nodal protein_coding protein_coding MGP_BALBcJ_T0027533.1 MGP_BALBcJ_G0017845.1 mouse_genomes_project 10 128211747 128212772 + MGP_BALBcJ_P0027533 Olfr780 protein_coding protein_coding MGP_BALBcJ_T0027109.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115952661 115984956 - MGP_BALBcJ_P0027109 Cpsf6 protein_coding protein_coding MGP_BALBcJ_T0027110.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115957026 115984959 - MGP_BALBcJ_P0027110 Cpsf6 protein_coding protein_coding MGP_BALBcJ_T0027111.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115957029 115984915 - MGP_BALBcJ_P0027111 Cpsf6 protein_coding protein_coding MGP_BALBcJ_T0027112.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115957361 115968925 - MGP_BALBcJ_P0027112 Cpsf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027113.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115961791 115984914 - MGP_BALBcJ_P0027113 Cpsf6 protein_coding protein_coding MGP_BALBcJ_T0027114.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115963513 115964044 - MGP_BALBcJ_P0027114 Cpsf6 protein_coding protein_coding MGP_BALBcJ_T0027115.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115966883 115971214 - Cpsf6 protein_coding retained_intron MGP_BALBcJ_T0027116.1 MGP_BALBcJ_G0017698.1 mouse_genomes_project 10 115974177 115987995 - MGP_BALBcJ_P0027116 Cpsf6 protein_coding protein_coding MGP_BALBcJ_T0003086.1 MGP_BALBcJ_G0002872.1 mouse_genomes_project 10 120500238 120501608 + C030027H14Rik antisense antisense MGP_BALBcJ_T0012417.1 MGP_BALBcJ_G0010514.1 mouse_genomes_project 10 116037305 116037813 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024501.1 MGP_BALBcJ_G0016947.1 mouse_genomes_project 10 7653207 8077808 - MGP_BALBcJ_P0024501 Grm1 protein_coding protein_coding MGP_BALBcJ_T0024502.1 MGP_BALBcJ_G0016947.1 mouse_genomes_project 10 7655736 8077757 - MGP_BALBcJ_P0024502 Grm1 protein_coding protein_coding MGP_BALBcJ_T0024503.1 MGP_BALBcJ_G0016947.1 mouse_genomes_project 10 7655944 8076420 - MGP_BALBcJ_P0024503 Grm1 protein_coding protein_coding MGP_BALBcJ_T0024504.1 MGP_BALBcJ_G0016947.1 mouse_genomes_project 10 7656591 7686994 - Grm1 protein_coding processed_transcript MGP_BALBcJ_T0024505.1 MGP_BALBcJ_G0016947.1 mouse_genomes_project 10 7713588 7716215 - Grm1 protein_coding processed_transcript MGP_BALBcJ_T0024506.1 MGP_BALBcJ_G0016947.1 mouse_genomes_project 10 8075952 8077702 - Grm1 protein_coding processed_transcript MGP_BALBcJ_T0017086.1 MGP_BALBcJ_G0015075.1 mouse_genomes_project 10 77831972 77835548 - E130317F20Rik processed_transcript processed_transcript MGP_BALBcJ_T0024959.1 MGP_BALBcJ_G0017110.1 mouse_genomes_project 10 38905427 38948849 + MGP_BALBcJ_P0024959 Ak9 protein_coding protein_coding MGP_BALBcJ_T0024960.1 MGP_BALBcJ_G0017110.1 mouse_genomes_project 10 38911504 39034889 + MGP_BALBcJ_P0024960 Ak9 protein_coding unknown_likely_coding MGP_BALBcJ_T0024961.1 MGP_BALBcJ_G0017110.1 mouse_genomes_project 10 38952423 39036135 + MGP_BALBcJ_P0024961 Ak9 protein_coding protein_coding MGP_BALBcJ_T0009623.1 MGP_BALBcJ_G0007748.1 mouse_genomes_project 10 127398532 127398593 - Mir6917 miRNA miRNA MGP_BALBcJ_T0002995.1 MGP_BALBcJ_G0002805.1 mouse_genomes_project 10 14906845 14911653 - Gm20655 antisense antisense MGP_BALBcJ_T0002996.1 MGP_BALBcJ_G0002805.1 mouse_genomes_project 10 14909429 14916234 - Gm20655 antisense antisense MGP_BALBcJ_T0025250.1 MGP_BALBcJ_G0017202.1 mouse_genomes_project 10 57560501 57659260 + MGP_BALBcJ_P0025250 Ascc1 protein_coding protein_coding MGP_BALBcJ_T0025251.1 MGP_BALBcJ_G0017202.1 mouse_genomes_project 10 57561023 57659260 + MGP_BALBcJ_P0025251 Ascc1 protein_coding protein_coding MGP_BALBcJ_T0026243.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78543703 78548619 - Rexo1 protein_coding retained_intron MGP_BALBcJ_T0026244.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78543706 78564306 - MGP_BALBcJ_P0026244 Rexo1 protein_coding protein_coding MGP_BALBcJ_T0026245.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78544445 78550704 - MGP_BALBcJ_P0026245 Rexo1 protein_coding protein_coding MGP_BALBcJ_T0026246.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78545054 78549585 - Rexo1 protein_coding retained_intron MGP_BALBcJ_T0026247.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78545054 78549253 - Rexo1 protein_coding retained_intron MGP_BALBcJ_T0026248.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78545397 78547095 - MGP_BALBcJ_P0026248 Rexo1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026249.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78548779 78552245 - MGP_BALBcJ_P0026249 Rexo1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026250.1 MGP_BALBcJ_G0017446.1 mouse_genomes_project 10 78550109 78552243 - Rexo1 protein_coding processed_transcript MGP_BALBcJ_T0027066.1 MGP_BALBcJ_G0017679.1 mouse_genomes_project 10 114141074 114153685 + MGP_BALBcJ_P0027066 A930009A15Rik protein_coding protein_coding MGP_BALBcJ_T0024742.1 MGP_BALBcJ_G0017024.1 mouse_genomes_project 10 21395709 21396358 + MGP_BALBcJ_P0024742 protein_coding protein_coding MGP_BALBcJ_T0098299.1 MGP_BALBcJ_G0036353.1 mouse_genomes_project 10 41648318 41648866 + pseudogene pseudogene MGP_BALBcJ_T0027514.1 MGP_BALBcJ_G0017831.1 mouse_genomes_project 10 127775387 127778091 - MGP_BALBcJ_P0027514 Mettl7b protein_coding protein_coding MGP_BALBcJ_T0024434.1 MGP_BALBcJ_G0016929.1 mouse_genomes_project 10 4383671 4415961 - MGP_BALBcJ_P0024434 protein_coding protein_coding MGP_BALBcJ_T0024472.1 MGP_BALBcJ_G0016937.1 mouse_genomes_project 10 4784418 4822816 + MGP_BALBcJ_P0024472 Zc3h12d protein_coding protein_coding MGP_BALBcJ_T0024637.1 MGP_BALBcJ_G0016980.1 mouse_genomes_project 10 16487429 16489478 + MGP_BALBcJ_P0024637 Olig3 protein_coding protein_coding MGP_BALBcJ_T0098300.1 MGP_BALBcJ_G0036354.1 mouse_genomes_project 10 56335797 56336366 - pseudogene pseudogene MGP_BALBcJ_T0024473.1 MGP_BALBcJ_G0016938.1 mouse_genomes_project 10 4850717 4901905 - MGP_BALBcJ_P0024473 Tab2 protein_coding protein_coding MGP_BALBcJ_T0024474.1 MGP_BALBcJ_G0016938.1 mouse_genomes_project 10 4852393 4855565 - Tab2 protein_coding retained_intron MGP_BALBcJ_T0024475.1 MGP_BALBcJ_G0016938.1 mouse_genomes_project 10 4852503 4856551 - Tab2 protein_coding retained_intron MGP_BALBcJ_T0024476.1 MGP_BALBcJ_G0016938.1 mouse_genomes_project 10 4856556 4878274 - MGP_BALBcJ_P0024476 Tab2 protein_coding protein_coding MGP_BALBcJ_T0024477.1 MGP_BALBcJ_G0016938.1 mouse_genomes_project 10 4864403 4869326 - MGP_BALBcJ_P0024477 Tab2 protein_coding protein_coding MGP_BALBcJ_T0098450.1 MGP_BALBcJ_G0036504.1 mouse_genomes_project 10 93217869 93217996 - Gm24186 rRNA rRNA MGP_BALBcJ_T0025591.1 MGP_BALBcJ_G0017278.1 mouse_genomes_project 10 68660037 68895920 - MGP_BALBcJ_P0025591 Bicc1 protein_coding protein_coding MGP_BALBcJ_T0025592.1 MGP_BALBcJ_G0017278.1 mouse_genomes_project 10 68662297 68882704 - MGP_BALBcJ_P0025592 Bicc1 protein_coding protein_coding MGP_BALBcJ_T0025593.1 MGP_BALBcJ_G0017278.1 mouse_genomes_project 10 68662297 68895558 - MGP_BALBcJ_P0025593 Bicc1 protein_coding protein_coding MGP_BALBcJ_T0025594.1 MGP_BALBcJ_G0017278.1 mouse_genomes_project 10 68672180 68686168 - Bicc1 protein_coding retained_intron MGP_BALBcJ_T0024736.1 MGP_BALBcJ_G0017018.1 mouse_genomes_project 10 21314434 21315466 + MGP_BALBcJ_P0024736 Taar3 protein_coding protein_coding MGP_BALBcJ_T0025791.1 MGP_BALBcJ_G0017325.1 mouse_genomes_project 10 74394665 74422658 - MGP_BALBcJ_P0025791 Col6a2 protein_coding protein_coding MGP_BALBcJ_T0025792.1 MGP_BALBcJ_G0017325.1 mouse_genomes_project 10 74396736 74422353 - MGP_BALBcJ_P0025792 Col6a2 protein_coding protein_coding MGP_BALBcJ_T0025793.1 MGP_BALBcJ_G0017325.1 mouse_genomes_project 10 74399912 74422353 - Col6a2 protein_coding retained_intron MGP_BALBcJ_T0003085.1 MGP_BALBcJ_G0002871.1 mouse_genomes_project 10 119577266 119580007 + Gm4473 antisense antisense MGP_BALBcJ_T0012380.1 MGP_BALBcJ_G0010477.1 mouse_genomes_project 10 39942802 39943280 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009575.1 MGP_BALBcJ_G0007700.1 mouse_genomes_project 10 77507324 77507386 - Mir6909 miRNA miRNA MGP_BALBcJ_T0100415.1 MGP_BALBcJ_G0038451.1 mouse_genomes_project 10 6812164 6812295 - Gm25635 snoRNA snoRNA MGP_BALBcJ_T0024435.1 MGP_BALBcJ_G0016930.1 mouse_genomes_project 10 4538927 4557400 + MGP_BALBcJ_P0024435 Lrp11 protein_coding protein_coding MGP_BALBcJ_T0024436.1 MGP_BALBcJ_G0016930.1 mouse_genomes_project 10 4538944 4577959 + MGP_BALBcJ_P0024436 Lrp11 protein_coding protein_coding MGP_BALBcJ_T0024437.1 MGP_BALBcJ_G0016930.1 mouse_genomes_project 10 4539106 4577959 + MGP_BALBcJ_P0024437 Lrp11 protein_coding protein_coding MGP_BALBcJ_T0024438.1 MGP_BALBcJ_G0016930.1 mouse_genomes_project 10 4539254 4576498 + MGP_BALBcJ_P0024438 Lrp11 protein_coding protein_coding MGP_BALBcJ_T0024439.1 MGP_BALBcJ_G0016930.1 mouse_genomes_project 10 4545175 4576228 + MGP_BALBcJ_P0024439 Lrp11 protein_coding protein_coding MGP_BALBcJ_T0012378.1 MGP_BALBcJ_G0010475.1 mouse_genomes_project 10 36965137 36965516 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027430.1 MGP_BALBcJ_G0017796.1 mouse_genomes_project 10 127102467 127104411 - MGP_BALBcJ_P0027430 Il23a protein_coding protein_coding MGP_BALBcJ_T0026459.1 MGP_BALBcJ_G0017505.1 mouse_genomes_project 10 79591517 79598384 + MGP_BALBcJ_P0026459 Aes protein_coding protein_coding MGP_BALBcJ_T0006055.1 MGP_BALBcJ_G0005070.1 mouse_genomes_project 10 18815376 18836271 + Gm5420 lincRNA lincRNA MGP_BALBcJ_T0006056.1 MGP_BALBcJ_G0005070.1 mouse_genomes_project 10 18819808 18821435 + Gm5420 lincRNA lincRNA MGP_BALBcJ_T0027042.1 MGP_BALBcJ_G0017669.1 mouse_genomes_project 10 111434058 111437619 - MGP_BALBcJ_P0027042 Atxn7l3b protein_coding protein_coding MGP_BALBcJ_T0027043.1 MGP_BALBcJ_G0017669.1 mouse_genomes_project 10 111436412 111437625 - Atxn7l3b protein_coding processed_transcript MGP_BALBcJ_T0012419.1 MGP_BALBcJ_G0010516.1 mouse_genomes_project 10 117530481 117531389 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026718.1 MGP_BALBcJ_G0017574.1 mouse_genomes_project 10 87092085 87171397 - MGP_BALBcJ_P0026718 Utp20 protein_coding protein_coding MGP_BALBcJ_T0009587.1 MGP_BALBcJ_G0007712.1 mouse_genomes_project 10 83513262 83513362 - Gm27392 miRNA miRNA MGP_BALBcJ_T0027194.1 MGP_BALBcJ_G0017721.1 mouse_genomes_project 10 120100881 120165648 - MGP_BALBcJ_P0027194 Rassf3 protein_coding protein_coding MGP_BALBcJ_T0011259.1 MGP_BALBcJ_G0009384.1 mouse_genomes_project 10 90510828 90510954 - Gm27582 misc_RNA misc_RNA MGP_BALBcJ_T0026807.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91156673 91452022 - MGP_BALBcJ_P0026807 Cfap54 protein_coding protein_coding MGP_BALBcJ_T0026808.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91157233 91452000 - MGP_BALBcJ_P0026808 Cfap54 protein_coding unknown_likely_coding MGP_BALBcJ_T0026809.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91157233 91416876 - MGP_BALBcJ_P0026809 Cfap54 protein_coding unknown_likely_coding MGP_BALBcJ_T0026810.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91177458 91214849 - MGP_BALBcJ_P0026810 Cfap54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026811.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91276589 91313791 - Cfap54 protein_coding processed_transcript MGP_BALBcJ_T0026812.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91291215 91313799 - MGP_BALBcJ_P0026812 Cfap54 protein_coding protein_coding MGP_BALBcJ_T0026813.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91347176 91412416 - MGP_BALBcJ_P0026813 Cfap54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026814.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91399539 91402922 - Cfap54 protein_coding processed_transcript MGP_BALBcJ_T0026815.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91406043 91452022 - MGP_BALBcJ_P0026815 Cfap54 protein_coding protein_coding MGP_BALBcJ_T0026816.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91413011 91452000 - MGP_BALBcJ_P0026816 Cfap54 protein_coding protein_coding MGP_BALBcJ_T0026817.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91432221 91452022 - Cfap54 protein_coding retained_intron MGP_BALBcJ_T0026818.1 MGP_BALBcJ_G0017589.1 mouse_genomes_project 10 91437807 91441300 - Cfap54 protein_coding processed_transcript MGP_BALBcJ_T0024759.1 MGP_BALBcJ_G0017034.1 mouse_genomes_project 10 22190167 22252924 - MGP_BALBcJ_P0024759 Enpp3 protein_coding protein_coding MGP_BALBcJ_T0024999.1 MGP_BALBcJ_G0017118.1 mouse_genomes_project 10 39244628 39290497 - MGP_BALBcJ_P0024999 protein_coding protein_coding MGP_BALBcJ_T0099205.1 MGP_BALBcJ_G0037241.1 mouse_genomes_project 10 84317626 84317730 - Gm24430 snRNA snRNA MGP_BALBcJ_T0025576.1 MGP_BALBcJ_G0017274.1 mouse_genomes_project 10 67987004 68028173 + MGP_BALBcJ_P0025576 Slc16a9 protein_coding protein_coding MGP_BALBcJ_T0025577.1 MGP_BALBcJ_G0017274.1 mouse_genomes_project 10 68009182 68026285 + Slc16a9 protein_coding retained_intron MGP_BALBcJ_T0025449.1 MGP_BALBcJ_G0017251.1 mouse_genomes_project 10 60780025 60868355 - MGP_BALBcJ_P0025449 Mypn protein_coding protein_coding MGP_BALBcJ_T0012395.1 MGP_BALBcJ_G0010492.1 mouse_genomes_project 10 58902849 58903214 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025774.1 MGP_BALBcJ_G0017319.1 mouse_genomes_project 10 74244569 74255574 + MGP_BALBcJ_P0025774 2610028H24Rik protein_coding protein_coding MGP_BALBcJ_T0026673.1 MGP_BALBcJ_G0017565.1 mouse_genomes_project 10 86486923 86519257 + MGP_BALBcJ_P0026673 Nup37 protein_coding protein_coding MGP_BALBcJ_T0026674.1 MGP_BALBcJ_G0017565.1 mouse_genomes_project 10 86487002 86519257 + MGP_BALBcJ_P0026674 Nup37 protein_coding protein_coding MGP_BALBcJ_T0100477.1 MGP_BALBcJ_G0038513.1 mouse_genomes_project 10 128604735 128604859 + Gm24717 snoRNA snoRNA MGP_BALBcJ_T0100457.1 MGP_BALBcJ_G0038493.1 mouse_genomes_project 10 94339392 94339525 + Gm24433 snoRNA snoRNA MGP_BALBcJ_T0026521.1 MGP_BALBcJ_G0017519.1 mouse_genomes_project 10 80796854 80806463 - MGP_BALBcJ_P0026521 protein_coding protein_coding MGP_BALBcJ_T0098307.1 MGP_BALBcJ_G0036361.1 mouse_genomes_project 10 115174251 115176487 + pseudogene pseudogene MGP_BALBcJ_T0012353.1 MGP_BALBcJ_G0010450.1 mouse_genomes_project 10 747976 748285 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024524.1 MGP_BALBcJ_G0016953.1 mouse_genomes_project 10 9999782 10003619 + MGP_BALBcJ_P0024524 Sf3b5 protein_coding protein_coding MGP_BALBcJ_T0006072.1 MGP_BALBcJ_G0005086.1 mouse_genomes_project 10 60953864 60957372 - Gm26789 lincRNA lincRNA MGP_BALBcJ_T0098710.1 MGP_BALBcJ_G0036764.1 mouse_genomes_project 10 40444749 40445054 - Gm26464 ribozyme ribozyme MGP_BALBcJ_T0025967.1 MGP_BALBcJ_G0017382.1 mouse_genomes_project 10 77324295 77369002 + MGP_BALBcJ_P0025967 protein_coding protein_coding MGP_BALBcJ_T0102112.1 MGP_BALBcJ_G0039929.1 mouse_genomes_project 10 19254513 19257533 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0024478.1 MGP_BALBcJ_G0016939.1 mouse_genomes_project 10 5162786 5451158 - MGP_BALBcJ_P0024478 Ust protein_coding protein_coding MGP_BALBcJ_T0024480.1 MGP_BALBcJ_G0016941.1 mouse_genomes_project 10 6495396 6498544 - MGP_BALBcJ_P0024480 Gm9930 protein_coding protein_coding MGP_BALBcJ_T0002999.1 MGP_BALBcJ_G0002808.1 mouse_genomes_project 10 22994137 23116672 + Gm29571 antisense antisense MGP_BALBcJ_T0025693.1 MGP_BALBcJ_G0017294.1 mouse_genomes_project 10 73322296 73332459 - MGP_BALBcJ_P0025693 Lrrc75b protein_coding protein_coding MGP_BALBcJ_T0025236.1 MGP_BALBcJ_G0017199.1 mouse_genomes_project 10 57430241 57450331 + MGP_BALBcJ_P0025236 Dnajb12 protein_coding protein_coding MGP_BALBcJ_T0025237.1 MGP_BALBcJ_G0017199.1 mouse_genomes_project 10 57430249 57448700 + MGP_BALBcJ_P0025237 Dnajb12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025238.1 MGP_BALBcJ_G0017199.1 mouse_genomes_project 10 57430260 57450325 + MGP_BALBcJ_P0025238 Dnajb12 protein_coding protein_coding MGP_BALBcJ_T0025239.1 MGP_BALBcJ_G0017199.1 mouse_genomes_project 10 57430303 57447461 + MGP_BALBcJ_P0025239 Dnajb12 protein_coding protein_coding MGP_BALBcJ_T0025240.1 MGP_BALBcJ_G0017199.1 mouse_genomes_project 10 57430311 57449207 + MGP_BALBcJ_P0025240 Dnajb12 protein_coding protein_coding MGP_BALBcJ_T0027331.1 MGP_BALBcJ_G0017763.1 mouse_genomes_project 10 126285842 126288055 + MGP_BALBcJ_P0027331 Ndufa4l2 protein_coding protein_coding MGP_BALBcJ_T0003031.1 MGP_BALBcJ_G0002833.1 mouse_genomes_project 10 74086667 74088363 + Gm16240 antisense antisense MGP_BALBcJ_T0100470.1 MGP_BALBcJ_G0038506.1 mouse_genomes_project 10 119276692 119276752 + Gm24298 snoRNA snoRNA MGP_BALBcJ_T0025947.1 MGP_BALBcJ_G0017370.1 mouse_genomes_project 10 76653596 76687141 + MGP_BALBcJ_P0025947 Slc1a6 protein_coding protein_coding MGP_BALBcJ_T0012361.1 MGP_BALBcJ_G0010458.1 mouse_genomes_project 10 14931745 14932685 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025442.1 MGP_BALBcJ_G0017249.1 mouse_genomes_project 10 60689411 60718981 + MGP_BALBcJ_P0025442 Pbld2 protein_coding protein_coding MGP_BALBcJ_T0025443.1 MGP_BALBcJ_G0017249.1 mouse_genomes_project 10 60689608 60725582 + MGP_BALBcJ_P0025443 Pbld2 protein_coding protein_coding MGP_BALBcJ_T0025444.1 MGP_BALBcJ_G0017249.1 mouse_genomes_project 10 60704444 60744643 + MGP_BALBcJ_P0025444 Pbld2 protein_coding unknown_likely_coding MGP_BALBcJ_T0025445.1 MGP_BALBcJ_G0017249.1 mouse_genomes_project 10 60721137 60724897 + Pbld2 protein_coding retained_intron MGP_BALBcJ_T0025446.1 MGP_BALBcJ_G0017249.1 mouse_genomes_project 10 60728350 60746535 + MGP_BALBcJ_P0025446 Pbld2 protein_coding protein_coding MGP_BALBcJ_T0025447.1 MGP_BALBcJ_G0017249.1 mouse_genomes_project 10 60728386 60746107 + MGP_BALBcJ_P0025447 Pbld2 protein_coding protein_coding MGP_BALBcJ_T0026619.1 MGP_BALBcJ_G0017550.1 mouse_genomes_project 10 84300872 84333690 + MGP_BALBcJ_P0026619 Fbxo7 protein_coding protein_coding MGP_BALBcJ_T0026620.1 MGP_BALBcJ_G0017550.1 mouse_genomes_project 10 84300928 84328413 + MGP_BALBcJ_P0026620 Fbxo7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026621.1 MGP_BALBcJ_G0017550.1 mouse_genomes_project 10 84300960 84308066 + MGP_BALBcJ_P0026621 Fbxo7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026622.1 MGP_BALBcJ_G0017550.1 mouse_genomes_project 10 84301130 84328443 + MGP_BALBcJ_P0026622 Fbxo7 protein_coding protein_coding MGP_BALBcJ_T0026623.1 MGP_BALBcJ_G0017550.1 mouse_genomes_project 10 84311912 84331991 + Fbxo7 protein_coding processed_transcript MGP_BALBcJ_T0026624.1 MGP_BALBcJ_G0017550.1 mouse_genomes_project 10 84322571 84326929 + Fbxo7 protein_coding retained_intron MGP_BALBcJ_T0026686.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86721751 86756066 + MGP_BALBcJ_P0026686 Gnptab protein_coding protein_coding MGP_BALBcJ_T0026687.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86721843 86756023 + MGP_BALBcJ_P0026687 Gnptab protein_coding protein_coding MGP_BALBcJ_T0026688.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86721843 86789864 + MGP_BALBcJ_P0026688 Gnptab protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026689.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86721845 86789873 + MGP_BALBcJ_P0026689 Gnptab protein_coding protein_coding MGP_BALBcJ_T0026690.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86771457 86775180 + Gnptab protein_coding processed_transcript MGP_BALBcJ_T0026691.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86775252 86782972 + Gnptab protein_coding processed_transcript MGP_BALBcJ_T0026692.1 MGP_BALBcJ_G0017568.1 mouse_genomes_project 10 86778153 86778839 + Gnptab protein_coding retained_intron MGP_BALBcJ_T0027587.1 MGP_BALBcJ_G0017886.1 mouse_genomes_project 10 129131945 129133201 - MGP_BALBcJ_P0027587 Olfr826 protein_coding protein_coding MGP_BALBcJ_T0027588.1 MGP_BALBcJ_G0017886.1 mouse_genomes_project 10 129131945 129136433 - MGP_BALBcJ_P0027588 Olfr826 protein_coding protein_coding MGP_BALBcJ_T0100427.1 MGP_BALBcJ_G0038463.1 mouse_genomes_project 10 22694825 22694956 - Gm25016 snoRNA snoRNA MGP_BALBcJ_T0025136.1 MGP_BALBcJ_G0017164.1 mouse_genomes_project 10 50426734 50872034 + MGP_BALBcJ_P0025136 Slc35f1 protein_coding protein_coding MGP_BALBcJ_T0009570.1 MGP_BALBcJ_G0007695.1 mouse_genomes_project 10 76208317 76208375 - Mir7659 miRNA miRNA MGP_BALBcJ_T0024645.1 MGP_BALBcJ_G0016983.1 mouse_genomes_project 10 16768677 16788783 + MGP_BALBcJ_P0024645 protein_coding protein_coding MGP_BALBcJ_T0099210.1 MGP_BALBcJ_G0037246.1 mouse_genomes_project 10 90873737 90873799 + Gm25884 snRNA snRNA MGP_BALBcJ_T0026995.1 MGP_BALBcJ_G0017653.1 mouse_genomes_project 10 106626309 106743200 + MGP_BALBcJ_P0026995 Ppp1r12a protein_coding unknown_likely_coding MGP_BALBcJ_T0026996.1 MGP_BALBcJ_G0017653.1 mouse_genomes_project 10 106626371 106740787 + MGP_BALBcJ_P0026996 Ppp1r12a protein_coding protein_coding MGP_BALBcJ_T0027410.1 MGP_BALBcJ_G0017790.1 mouse_genomes_project 10 127000622 127002511 - MGP_BALBcJ_P0027410 Spryd4 protein_coding protein_coding MGP_BALBcJ_T0102118.1 MGP_BALBcJ_G0039935.1 mouse_genomes_project 10 104973236 104973702 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0025422.1 MGP_BALBcJ_G0017246.1 mouse_genomes_project 10 60607042 60634131 + MGP_BALBcJ_P0025422 Dna2 protein_coding protein_coding MGP_BALBcJ_T0025423.1 MGP_BALBcJ_G0017246.1 mouse_genomes_project 10 60607091 60633713 + MGP_BALBcJ_P0025423 Dna2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025424.1 MGP_BALBcJ_G0017246.1 mouse_genomes_project 10 60607096 60609684 + Dna2 protein_coding retained_intron MGP_BALBcJ_T0025425.1 MGP_BALBcJ_G0017246.1 mouse_genomes_project 10 60607126 60626309 + Dna2 protein_coding retained_intron MGP_BALBcJ_T0025426.1 MGP_BALBcJ_G0017246.1 mouse_genomes_project 10 60625860 60634130 + Dna2 protein_coding retained_intron MGP_BALBcJ_T0025427.1 MGP_BALBcJ_G0017246.1 mouse_genomes_project 10 60626155 60634125 + Dna2 protein_coding retained_intron MGP_BALBcJ_T0003021.1 MGP_BALBcJ_G0002824.1 mouse_genomes_project 10 60664133 60665006 + Gm16135 antisense antisense MGP_BALBcJ_T0027058.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114021061 114159545 - MGP_BALBcJ_P0027058 Lgr5 protein_coding protein_coding MGP_BALBcJ_T0027059.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114022828 114159258 - MGP_BALBcJ_P0027059 Lgr5 protein_coding protein_coding MGP_BALBcJ_T0027060.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114022828 114159258 - MGP_BALBcJ_P0027060 Lgr5 protein_coding protein_coding MGP_BALBcJ_T0027061.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114027461 114029813 - Lgr5 protein_coding retained_intron MGP_BALBcJ_T0027062.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114028658 114034197 - Lgr5 protein_coding retained_intron MGP_BALBcJ_T0027063.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114033790 114159524 - Lgr5 protein_coding retained_intron MGP_BALBcJ_T0027064.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114044682 114159524 - Lgr5 protein_coding retained_intron MGP_BALBcJ_T0027065.1 MGP_BALBcJ_G0017678.1 mouse_genomes_project 10 114092638 114159508 - Lgr5 protein_coding processed_transcript MGP_BALBcJ_T0027450.1 MGP_BALBcJ_G0017804.1 mouse_genomes_project 10 127220960 127251901 + MGP_BALBcJ_P0027450 Rnf41 protein_coding protein_coding MGP_BALBcJ_T0027451.1 MGP_BALBcJ_G0017804.1 mouse_genomes_project 10 127220960 127251901 + MGP_BALBcJ_P0027451 Rnf41 protein_coding protein_coding MGP_BALBcJ_T0024785.1 MGP_BALBcJ_G0017040.1 mouse_genomes_project 10 23425490 23517546 - MGP_BALBcJ_P0024785 Tmem200a protein_coding protein_coding MGP_BALBcJ_T0025599.1 MGP_BALBcJ_G0017280.1 mouse_genomes_project 10 68993968 69024548 - MGP_BALBcJ_P0025599 Ube2d1 protein_coding protein_coding MGP_BALBcJ_T0025600.1 MGP_BALBcJ_G0017280.1 mouse_genomes_project 10 68994647 68995871 - Ube2d1 protein_coding retained_intron MGP_BALBcJ_T0025601.1 MGP_BALBcJ_G0017280.1 mouse_genomes_project 10 68996687 69024504 - Ube2d1 protein_coding retained_intron MGP_BALBcJ_T0026512.1 MGP_BALBcJ_G0017512.1 mouse_genomes_project 10 80118886 80135911 + MGP_BALBcJ_P0026512 Zfp873 protein_coding protein_coding MGP_BALBcJ_T0025787.1 MGP_BALBcJ_G0017324.1 mouse_genomes_project 10 74372894 74388030 + MGP_BALBcJ_P0025787 Ftcd protein_coding protein_coding MGP_BALBcJ_T0025788.1 MGP_BALBcJ_G0017324.1 mouse_genomes_project 10 74372898 74388807 + Ftcd protein_coding retained_intron MGP_BALBcJ_T0025789.1 MGP_BALBcJ_G0017324.1 mouse_genomes_project 10 74372952 74387781 + MGP_BALBcJ_P0025789 Ftcd protein_coding unknown_likely_coding MGP_BALBcJ_T0025790.1 MGP_BALBcJ_G0017324.1 mouse_genomes_project 10 74385601 74387037 + Ftcd protein_coding processed_transcript MGP_BALBcJ_T0025346.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59718430 59721826 - MGP_BALBcJ_P0025346 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025347.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59718985 59721721 - MGP_BALBcJ_P0025347 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025348.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59718985 59721744 - MGP_BALBcJ_P0025348 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025349.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59718985 59721826 - MGP_BALBcJ_P0025349 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025350.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59718987 59721789 - MGP_BALBcJ_P0025350 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025351.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59719610 59753046 - MGP_BALBcJ_P0025351 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025352.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59719692 59747366 - MGP_BALBcJ_P0025352 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025353.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59719693 59756542 - MGP_BALBcJ_P0025353 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025354.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59719695 59721272 - MGP_BALBcJ_P0025354 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025355.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59720722 59756546 - MGP_BALBcJ_P0025355 2010107G23Rik protein_coding protein_coding MGP_BALBcJ_T0025357.1 MGP_BALBcJ_G0017229.1 mouse_genomes_project 10 59747180 59756556 - 2010107G23Rik protein_coding processed_transcript MGP_BALBcJ_T0027048.1 MGP_BALBcJ_G0017672.1 mouse_genomes_project 10 113640589 113749727 - MGP_BALBcJ_P0027048 Tph2 protein_coding protein_coding MGP_BALBcJ_T0027049.1 MGP_BALBcJ_G0017672.1 mouse_genomes_project 10 113738726 113740253 - Tph2 protein_coding processed_transcript MGP_BALBcJ_T0012410.1 MGP_BALBcJ_G0010507.1 mouse_genomes_project 10 92046490 92046953 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100434.1 MGP_BALBcJ_G0038470.1 mouse_genomes_project 10 37684621 37684750 + Gm25613 snoRNA snoRNA MGP_BALBcJ_T0026149.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78151240 78156136 + MGP_BALBcJ_P0026149 Cirbp protein_coding protein_coding MGP_BALBcJ_T0026150.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78153015 78157475 + MGP_BALBcJ_P0026150 Cirbp protein_coding protein_coding MGP_BALBcJ_T0026151.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78153077 78158608 + MGP_BALBcJ_P0026151 Cirbp protein_coding protein_coding MGP_BALBcJ_T0026152.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78153100 78155949 + Cirbp protein_coding retained_intron MGP_BALBcJ_T0026153.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78153123 78156957 + Cirbp protein_coding retained_intron MGP_BALBcJ_T0026154.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78156046 78157024 + Cirbp protein_coding retained_intron MGP_BALBcJ_T0026155.1 MGP_BALBcJ_G0017426.1 mouse_genomes_project 10 78157801 78158518 + Cirbp protein_coding retained_intron MGP_BALBcJ_T0026099.1 MGP_BALBcJ_G0017419.1 mouse_genomes_project 10 78020187 78021424 - Polr2e protein_coding retained_intron MGP_BALBcJ_T0026100.1 MGP_BALBcJ_G0017419.1 mouse_genomes_project 10 78020187 78023949 - Polr2e protein_coding retained_intron MGP_BALBcJ_T0026101.1 MGP_BALBcJ_G0017419.1 mouse_genomes_project 10 78020187 78024034 - MGP_BALBcJ_P0026101 Polr2e protein_coding protein_coding MGP_BALBcJ_T0026102.1 MGP_BALBcJ_G0017419.1 mouse_genomes_project 10 78020189 78023889 - Polr2e protein_coding retained_intron MGP_BALBcJ_T0026103.1 MGP_BALBcJ_G0017419.1 mouse_genomes_project 10 78020413 78023940 - Polr2e protein_coding retained_intron MGP_BALBcJ_T0099202.1 MGP_BALBcJ_G0037238.1 mouse_genomes_project 10 81372211 81372314 - Gm23122 snRNA snRNA MGP_BALBcJ_T0012408.1 MGP_BALBcJ_G0010505.1 mouse_genomes_project 10 84360289 84360406 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027495.1 MGP_BALBcJ_G0017823.1 mouse_genomes_project 10 127624764 127635074 + MGP_BALBcJ_P0027495 Dnajc14 protein_coding unknown_likely_coding MGP_BALBcJ_T0025450.1 MGP_BALBcJ_G0017252.1 mouse_genomes_project 10 60905542 60979370 + MGP_BALBcJ_P0025450 Herc4 protein_coding protein_coding MGP_BALBcJ_T0025451.1 MGP_BALBcJ_G0017252.1 mouse_genomes_project 10 60905807 60979359 + MGP_BALBcJ_P0025451 Herc4 protein_coding unknown_likely_coding MGP_BALBcJ_T0024384.1 MGP_BALBcJ_G0016923.1 mouse_genomes_project 10 2723530 2735563 - MGP_BALBcJ_P0024384 Mtrf1l protein_coding protein_coding MGP_BALBcJ_T0024385.1 MGP_BALBcJ_G0016923.1 mouse_genomes_project 10 2724862 2727384 - Mtrf1l protein_coding processed_transcript MGP_BALBcJ_T0024386.1 MGP_BALBcJ_G0016923.1 mouse_genomes_project 10 2730871 2735199 - Mtrf1l protein_coding processed_transcript MGP_BALBcJ_T0025987.1 MGP_BALBcJ_G0017387.1 mouse_genomes_project 10 77584058 77591910 - MGP_BALBcJ_P0025987 C2cd4c protein_coding protein_coding MGP_BALBcJ_T0025988.1 MGP_BALBcJ_G0017387.1 mouse_genomes_project 10 77584058 77591903 - MGP_BALBcJ_P0025988 C2cd4c protein_coding protein_coding MGP_BALBcJ_T0098813.1 MGP_BALBcJ_G0036866.1 mouse_genomes_project 10 92107790 92108571 + sense_intronic sense_intronic MGP_BALBcJ_T0026929.1 MGP_BALBcJ_G0017632.1 mouse_genomes_project 10 98476802 98565626 + MGP_BALBcJ_P0026929 Kitl protein_coding protein_coding MGP_BALBcJ_T0026930.1 MGP_BALBcJ_G0017632.1 mouse_genomes_project 10 98476998 98542160 + MGP_BALBcJ_P0026930 Kitl protein_coding protein_coding MGP_BALBcJ_T0026931.1 MGP_BALBcJ_G0017632.1 mouse_genomes_project 10 98477088 98561608 + MGP_BALBcJ_P0026931 Kitl protein_coding protein_coding MGP_BALBcJ_T0026903.1 MGP_BALBcJ_G0017614.1 mouse_genomes_project 10 93965265 93982339 - MGP_BALBcJ_P0026903 Nudt4 protein_coding protein_coding MGP_BALBcJ_T0003089.1 MGP_BALBcJ_G0002875.1 mouse_genomes_project 10 126444828 126449941 - Gm16230 antisense antisense MGP_BALBcJ_T0100435.1 MGP_BALBcJ_G0038471.1 mouse_genomes_project 10 37833676 37833890 + Rnu3a snoRNA snoRNA MGP_BALBcJ_T0026555.1 MGP_BALBcJ_G0017528.1 mouse_genomes_project 10 81575896 81584313 + MGP_BALBcJ_P0026555 D10Wsu102e protein_coding protein_coding MGP_BALBcJ_T0026856.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92323224 92359474 - MGP_BALBcJ_P0026856 Vezt protein_coding protein_coding MGP_BALBcJ_T0026857.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92346426 92421626 - MGP_BALBcJ_P0026857 Vezt protein_coding protein_coding MGP_BALBcJ_T0026858.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92353069 92421557 - MGP_BALBcJ_P0026858 Vezt protein_coding protein_coding MGP_BALBcJ_T0026859.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92356243 92421514 - MGP_BALBcJ_P0026859 Vezt protein_coding protein_coding MGP_BALBcJ_T0026860.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92356700 92421551 - MGP_BALBcJ_P0026860 Vezt protein_coding protein_coding MGP_BALBcJ_T0026861.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92369495 92382016 - MGP_BALBcJ_P0026861 Vezt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026862.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92372306 92421586 - MGP_BALBcJ_P0026862 Vezt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026863.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92378556 92421610 - MGP_BALBcJ_P0026863 Vezt protein_coding protein_coding MGP_BALBcJ_T0026864.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92381952 92406024 - MGP_BALBcJ_P0026864 Vezt protein_coding protein_coding MGP_BALBcJ_T0026865.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92386813 92421558 - Vezt protein_coding retained_intron MGP_BALBcJ_T0026866.1 MGP_BALBcJ_G0017601.1 mouse_genomes_project 10 92389030 92421476 - Vezt protein_coding processed_transcript MGP_BALBcJ_T0011256.1 MGP_BALBcJ_G0009381.1 mouse_genomes_project 10 90453189 90453351 - Gm27608 misc_RNA misc_RNA MGP_BALBcJ_T0026274.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78760125 78800934 + MGP_BALBcJ_P0026274 Dot1l protein_coding protein_coding MGP_BALBcJ_T0026275.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78760127 78799860 + MGP_BALBcJ_P0026275 Dot1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026276.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78760382 78771510 + Dot1l protein_coding retained_intron MGP_BALBcJ_T0026277.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78782733 78799864 + MGP_BALBcJ_P0026277 Dot1l protein_coding protein_coding MGP_BALBcJ_T0026278.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78790341 78791599 + Dot1l protein_coding retained_intron MGP_BALBcJ_T0026279.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78794240 78799820 + MGP_BALBcJ_P0026279 Dot1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026280.1 MGP_BALBcJ_G0017457.1 mouse_genomes_project 10 78796926 78799291 + MGP_BALBcJ_P0026280 Dot1l protein_coding protein_coding MGP_BALBcJ_T0024938.1 MGP_BALBcJ_G0017098.1 mouse_genomes_project 10 37574061 37600628 - MGP_BALBcJ_P0024938 Mfsd4b1 protein_coding protein_coding MGP_BALBcJ_T0024939.1 MGP_BALBcJ_G0017098.1 mouse_genomes_project 10 37583390 37600519 - Mfsd4b1 protein_coding processed_transcript MGP_BALBcJ_T0025293.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58676212 58734270 - MGP_BALBcJ_P0025293 Sgpl1 protein_coding protein_coding MGP_BALBcJ_T0025294.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58676212 58734240 - MGP_BALBcJ_P0025294 Sgpl1 protein_coding protein_coding MGP_BALBcJ_T0025295.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58676212 58734240 - MGP_BALBcJ_P0025295 Sgpl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025296.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58678374 58680675 - Sgpl1 protein_coding retained_intron MGP_BALBcJ_T0025297.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58681744 58683027 - Sgpl1 protein_coding retained_intron MGP_BALBcJ_T0025298.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58690219 58734299 - MGP_BALBcJ_P0025298 Sgpl1 protein_coding protein_coding MGP_BALBcJ_T0025299.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58692133 58734272 - MGP_BALBcJ_P0025299 Sgpl1 protein_coding protein_coding MGP_BALBcJ_T0025300.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58695504 58734248 - Sgpl1 protein_coding processed_transcript MGP_BALBcJ_T0025301.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58701379 58733426 - MGP_BALBcJ_P0025301 Sgpl1 protein_coding protein_coding MGP_BALBcJ_T0025302.1 MGP_BALBcJ_G0017212.1 mouse_genomes_project 10 58732422 58734200 - Sgpl1 protein_coding retained_intron MGP_BALBcJ_T0012375.1 MGP_BALBcJ_G0010472.1 mouse_genomes_project 10 24128798 24129810 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011255.1 MGP_BALBcJ_G0009380.1 mouse_genomes_project 10 90452867 90453060 - Gm27999 misc_RNA misc_RNA MGP_BALBcJ_T0100455.1 MGP_BALBcJ_G0038491.1 mouse_genomes_project 10 91072917 91073060 - Gm24241 snoRNA snoRNA MGP_BALBcJ_T0024832.1 MGP_BALBcJ_G0017057.1 mouse_genomes_project 10 28053868 28064215 - MGP_BALBcJ_P0024832 Hint3 protein_coding protein_coding MGP_BALBcJ_T0024833.1 MGP_BALBcJ_G0017057.1 mouse_genomes_project 10 28054076 28064069 - MGP_BALBcJ_P0024833 Hint3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024834.1 MGP_BALBcJ_G0017057.1 mouse_genomes_project 10 28054110 28064073 - MGP_BALBcJ_P0024834 Hint3 protein_coding protein_coding MGP_BALBcJ_T0025493.1 MGP_BALBcJ_G0017264.1 mouse_genomes_project 10 65612875 65639415 - MGP_BALBcJ_P0025493 Zfp365 protein_coding protein_coding MGP_BALBcJ_T0025494.1 MGP_BALBcJ_G0017264.1 mouse_genomes_project 10 65612940 65628048 - Zfp365 protein_coding processed_transcript MGP_BALBcJ_T0025495.1 MGP_BALBcJ_G0017264.1 mouse_genomes_project 10 65616727 65625734 - Zfp365 protein_coding processed_transcript MGP_BALBcJ_T0025496.1 MGP_BALBcJ_G0017264.1 mouse_genomes_project 10 65623431 65639188 - Zfp365 protein_coding retained_intron MGP_BALBcJ_T0027521.1 MGP_BALBcJ_G0017838.1 mouse_genomes_project 10 127979376 127985363 - MGP_BALBcJ_P0027521 Olfr770 protein_coding protein_coding MGP_BALBcJ_T0027522.1 MGP_BALBcJ_G0017838.1 mouse_genomes_project 10 127979376 127980312 - MGP_BALBcJ_P0027522 Olfr770 protein_coding protein_coding MGP_BALBcJ_T0027523.1 MGP_BALBcJ_G0017838.1 mouse_genomes_project 10 127979922 127986106 - MGP_BALBcJ_P0027523 Olfr770 protein_coding protein_coding MGP_BALBcJ_T0027524.1 MGP_BALBcJ_G0017838.1 mouse_genomes_project 10 127979989 127986110 - MGP_BALBcJ_P0027524 Olfr770 protein_coding protein_coding MGP_BALBcJ_T0026540.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80953330 80968782 - MGP_BALBcJ_P0026540 Nfyb protein_coding protein_coding MGP_BALBcJ_T0026541.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80953922 80968739 - Nfyb protein_coding retained_intron MGP_BALBcJ_T0026542.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80955111 80956295 - Nfyb protein_coding retained_intron MGP_BALBcJ_T0026543.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80955801 80957184 - Nfyb protein_coding retained_intron MGP_BALBcJ_T0026544.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80957049 80968296 - Nfyb protein_coding processed_transcript MGP_BALBcJ_T0026545.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80957151 80968279 - MGP_BALBcJ_P0026545 Nfyb protein_coding protein_coding MGP_BALBcJ_T0026546.1 MGP_BALBcJ_G0017523.1 mouse_genomes_project 10 80959702 80961943 - Nfyb protein_coding retained_intron MGP_BALBcJ_T0100432.1 MGP_BALBcJ_G0038468.1 mouse_genomes_project 10 35645880 35646012 + Gm24889 snoRNA snoRNA MGP_BALBcJ_T0025467.1 MGP_BALBcJ_G0017257.1 mouse_genomes_project 10 61584460 61745968 - MGP_BALBcJ_P0025467 Lrrtm3 protein_coding protein_coding MGP_BALBcJ_T0025468.1 MGP_BALBcJ_G0017257.1 mouse_genomes_project 10 61585878 61745971 - Lrrtm3 protein_coding processed_transcript MGP_BALBcJ_T0025469.1 MGP_BALBcJ_G0017257.1 mouse_genomes_project 10 61743189 61745941 - Lrrtm3 protein_coding retained_intron MGP_BALBcJ_T0025470.1 MGP_BALBcJ_G0017257.1 mouse_genomes_project 10 61744747 61745944 - MGP_BALBcJ_P0025470 Lrrtm3 protein_coding protein_coding MGP_BALBcJ_T0098298.1 MGP_BALBcJ_G0036352.1 mouse_genomes_project 10 15144205 15144442 + pseudogene pseudogene MGP_BALBcJ_T0000819.1 MGP_BALBcJ_G0000751.1 mouse_genomes_project 10 96929867 96930231 - TEC TEC MGP_BALBcJ_T0006124.1 MGP_BALBcJ_G0005116.1 mouse_genomes_project 10 104928008 104931823 - C230021G24Rik lincRNA lincRNA MGP_BALBcJ_T0024953.1 MGP_BALBcJ_G0017105.1 mouse_genomes_project 10 38278369 38410883 + MGP_BALBcJ_P0024953 Mettl24 protein_coding protein_coding MGP_BALBcJ_T0024707.1 MGP_BALBcJ_G0017001.1 mouse_genomes_project 10 19171169 19176198 - MGP_BALBcJ_P0024707 protein_coding protein_coding MGP_BALBcJ_T0026460.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79606571 79622498 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026461.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79606744 79607843 + MGP_BALBcJ_P0026461 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026462.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79606749 79612336 + MGP_BALBcJ_P0026462 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026463.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79607270 79622502 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026464.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79607272 79622505 + MGP_BALBcJ_P0026464 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026465.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79607341 79622505 + MGP_BALBcJ_P0026465 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026466.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79607427 79622500 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026467.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79607509 79612646 + MGP_BALBcJ_P0026467 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026468.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79607542 79622877 + MGP_BALBcJ_P0026468 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026469.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79612844 79618959 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026470.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79614553 79618916 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026471.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79619123 79619978 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026472.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79619457 79622455 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0026473.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79620000 79622505 + MGP_BALBcJ_P0026473 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026474.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79620030 79622505 + MGP_BALBcJ_P0026474 Tle2 protein_coding protein_coding MGP_BALBcJ_T0026475.1 MGP_BALBcJ_G0017506.1 mouse_genomes_project 10 79620672 79622333 + Tle2 protein_coding retained_intron MGP_BALBcJ_T0024590.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11749530 11810050 + MGP_BALBcJ_P0024590 Nmbr protein_coding protein_coding MGP_BALBcJ_T0024591.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11749536 11796499 + Nmbr protein_coding processed_transcript MGP_BALBcJ_T0024592.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11749548 11802293 + Nmbr protein_coding processed_transcript MGP_BALBcJ_T0024593.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11749560 11810573 + MGP_BALBcJ_P0024593 Nmbr protein_coding protein_coding MGP_BALBcJ_T0024594.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11749566 11764427 + Nmbr protein_coding retained_intron MGP_BALBcJ_T0024596.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11803431 11814135 + MGP_BALBcJ_P0024596 Nmbr protein_coding protein_coding MGP_BALBcJ_T0024597.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11803493 11813868 + MGP_BALBcJ_P0024597 Nmbr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024598.1 MGP_BALBcJ_G0016965.1 mouse_genomes_project 10 11803493 11813868 + MGP_BALBcJ_P0024598 Nmbr protein_coding protein_coding MGP_BALBcJ_T0025089.1 MGP_BALBcJ_G0017146.1 mouse_genomes_project 10 43081410 43181523 - MGP_BALBcJ_P0025089 Lin28b protein_coding protein_coding MGP_BALBcJ_T0025090.1 MGP_BALBcJ_G0017146.1 mouse_genomes_project 10 43085855 43181616 - MGP_BALBcJ_P0025090 Lin28b protein_coding unknown_likely_coding MGP_BALBcJ_T0025922.1 MGP_BALBcJ_G0017357.1 mouse_genomes_project 10 76030128 76037830 - MGP_BALBcJ_P0025922 D10Jhu81e protein_coding protein_coding MGP_BALBcJ_T0100417.1 MGP_BALBcJ_G0038453.1 mouse_genomes_project 10 8325505 8325643 - Gm25979 snoRNA snoRNA MGP_BALBcJ_T0025964.1 MGP_BALBcJ_G0017379.1 mouse_genomes_project 10 76938694 76966150 - MGP_BALBcJ_P0025964 2610008E11Rik protein_coding protein_coding MGP_BALBcJ_T0024985.1 MGP_BALBcJ_G0017115.1 mouse_genomes_project 10 39112629 39124534 + MGP_BALBcJ_P0024985 Cd164 protein_coding protein_coding MGP_BALBcJ_T0024986.1 MGP_BALBcJ_G0017115.1 mouse_genomes_project 10 39112716 39118489 + Cd164 protein_coding retained_intron MGP_BALBcJ_T0024987.1 MGP_BALBcJ_G0017115.1 mouse_genomes_project 10 39113107 39122532 + MGP_BALBcJ_P0024987 Cd164 protein_coding protein_coding MGP_BALBcJ_T0024988.1 MGP_BALBcJ_G0017115.1 mouse_genomes_project 10 39113259 39120093 + Cd164 protein_coding processed_transcript MGP_BALBcJ_T0102122.1 MGP_BALBcJ_G0039939.1 mouse_genomes_project 10 128272043 128272484 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0026911.1 MGP_BALBcJ_G0017621.1 mouse_genomes_project 10 96113056 96146957 + MGP_BALBcJ_P0026911 Epyc protein_coding protein_coding MGP_BALBcJ_T0026912.1 MGP_BALBcJ_G0017621.1 mouse_genomes_project 10 96116077 96147511 + MGP_BALBcJ_P0026912 Epyc protein_coding protein_coding MGP_BALBcJ_T0025113.1 MGP_BALBcJ_G0017153.1 mouse_genomes_project 10 49329471 49334532 - MGP_BALBcJ_P0025113 Fam162b protein_coding protein_coding MGP_BALBcJ_T0026518.1 MGP_BALBcJ_G0017516.1 mouse_genomes_project 10 80404642 80407787 - MGP_BALBcJ_P0026518 4932415D10Rik protein_coding protein_coding MGP_BALBcJ_T0098446.1 MGP_BALBcJ_G0036500.1 mouse_genomes_project 10 42357185 42357296 + Gm27977 rRNA rRNA MGP_BALBcJ_T0027108.1 MGP_BALBcJ_G0017697.1 mouse_genomes_project 10 115896269 115901346 - MGP_BALBcJ_P0027108 Lyz1 protein_coding protein_coding MGP_BALBcJ_T0006057.1 MGP_BALBcJ_G0005071.1 mouse_genomes_project 10 18865709 18868849 + Gm29323 lincRNA lincRNA MGP_BALBcJ_T0027463.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361546 127362746 - MGP_BALBcJ_P0027463 protein_coding protein_coding MGP_BALBcJ_T0027464.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361546 127362594 - MGP_BALBcJ_P0027464 protein_coding protein_coding MGP_BALBcJ_T0027465.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361546 127362603 - MGP_BALBcJ_P0027465 protein_coding protein_coding MGP_BALBcJ_T0027466.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361549 127362579 - protein_coding retained_intron MGP_BALBcJ_T0027467.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361552 127362543 - MGP_BALBcJ_P0027467 protein_coding protein_coding MGP_BALBcJ_T0027468.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361553 127362600 - protein_coding retained_intron MGP_BALBcJ_T0027469.1 MGP_BALBcJ_G0017810.1 mouse_genomes_project 10 127361916 127362553 - protein_coding retained_intron MGP_BALBcJ_T0026971.1 MGP_BALBcJ_G0017643.1 mouse_genomes_project 10 103668793 103720702 - Tmtc2 protein_coding processed_transcript MGP_BALBcJ_T0026972.1 MGP_BALBcJ_G0017643.1 mouse_genomes_project 10 103668793 104071776 - MGP_BALBcJ_P0026972 Tmtc2 protein_coding protein_coding MGP_BALBcJ_T0026973.1 MGP_BALBcJ_G0017643.1 mouse_genomes_project 10 103670635 103720687 - Tmtc2 protein_coding processed_transcript MGP_BALBcJ_T0026974.1 MGP_BALBcJ_G0017643.1 mouse_genomes_project 10 103670794 103680762 - Tmtc2 protein_coding processed_transcript MGP_BALBcJ_T0026975.1 MGP_BALBcJ_G0017643.1 mouse_genomes_project 10 103755745 104071792 - Tmtc2 protein_coding retained_intron MGP_BALBcJ_T0026976.1 MGP_BALBcJ_G0017643.1 mouse_genomes_project 10 103906166 104032280 - Tmtc2 protein_coding processed_transcript MGP_BALBcJ_T0003027.1 MGP_BALBcJ_G0002829.1 mouse_genomes_project 10 68820379 68821155 + Gm15647 antisense antisense MGP_BALBcJ_T0003000.1 MGP_BALBcJ_G0002809.1 mouse_genomes_project 10 24846310 24853660 + 4930579H20Rik antisense antisense MGP_BALBcJ_T0027560.1 MGP_BALBcJ_G0017865.1 mouse_genomes_project 10 128650811 128655648 - MGP_BALBcJ_P0027560 Olfr806 protein_coding protein_coding MGP_BALBcJ_T0024662.1 MGP_BALBcJ_G0016989.1 mouse_genomes_project 10 17434308 17436097 - MGP_BALBcJ_P0024662 4933406P04Rik protein_coding protein_coding MGP_BALBcJ_T0027024.1 MGP_BALBcJ_G0017661.1 mouse_genomes_project 10 109779893 109782951 + MGP_BALBcJ_P0027024 Bbs10 protein_coding protein_coding MGP_BALBcJ_T0102121.1 MGP_BALBcJ_G0039938.1 mouse_genomes_project 10 128134194 128134401 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006041.1 MGP_BALBcJ_G0005060.1 mouse_genomes_project 10 1284541 1289377 + Gm21781 lincRNA lincRNA MGP_BALBcJ_T0026073.1 MGP_BALBcJ_G0017410.1 mouse_genomes_project 10 77892842 77893127 + MGP_BALBcJ_P0026073 Gm26602 protein_coding protein_coding MGP_BALBcJ_T0006115.1 MGP_BALBcJ_G0005109.1 mouse_genomes_project 10 90546832 90755818 - Gm20757 lincRNA lincRNA MGP_BALBcJ_T0002997.1 MGP_BALBcJ_G0002806.1 mouse_genomes_project 10 18275285 18284500 + Gm26577 antisense antisense MGP_BALBcJ_T0025842.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75398022 75415597 + MGP_BALBcJ_P0025842 Pttg1ip protein_coding protein_coding MGP_BALBcJ_T0025843.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75398058 75404294 + Pttg1ip protein_coding retained_intron MGP_BALBcJ_T0025844.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75398060 75410764 + MGP_BALBcJ_P0025844 Pttg1ip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025845.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75398105 75414200 + MGP_BALBcJ_P0025845 Pttg1ip protein_coding protein_coding MGP_BALBcJ_T0025846.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75398124 75409776 + MGP_BALBcJ_P0025846 Pttg1ip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025847.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75398711 75414134 + MGP_BALBcJ_P0025847 Pttg1ip protein_coding protein_coding MGP_BALBcJ_T0025848.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75400247 75409864 + MGP_BALBcJ_P0025848 Pttg1ip protein_coding protein_coding MGP_BALBcJ_T0025849.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75406258 75414097 + Pttg1ip protein_coding retained_intron MGP_BALBcJ_T0025850.1 MGP_BALBcJ_G0017336.1 mouse_genomes_project 10 75409201 75413995 + Pttg1ip protein_coding retained_intron MGP_BALBcJ_T0024515.1 MGP_BALBcJ_G0016949.1 mouse_genomes_project 10 8272358 8289024 + MGP_BALBcJ_P0024515 Fbxo30 protein_coding protein_coding MGP_BALBcJ_T0024516.1 MGP_BALBcJ_G0016949.1 mouse_genomes_project 10 8272623 8286490 + MGP_BALBcJ_P0024516 Fbxo30 protein_coding protein_coding MGP_BALBcJ_T0026675.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86540611 86586100 + MGP_BALBcJ_P0026675 Ccdc53 protein_coding protein_coding MGP_BALBcJ_T0026676.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86540664 86555103 + MGP_BALBcJ_P0026676 Ccdc53 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026677.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86540670 86585948 + MGP_BALBcJ_P0026677 Ccdc53 protein_coding protein_coding MGP_BALBcJ_T0026678.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86540689 86565191 + MGP_BALBcJ_P0026678 Ccdc53 protein_coding protein_coding MGP_BALBcJ_T0026679.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86540702 86554805 + Ccdc53 protein_coding retained_intron MGP_BALBcJ_T0026680.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86540781 86564970 + MGP_BALBcJ_P0026680 Ccdc53 protein_coding protein_coding MGP_BALBcJ_T0026681.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86544067 86574953 + Ccdc53 protein_coding processed_transcript MGP_BALBcJ_T0026682.1 MGP_BALBcJ_G0017566.1 mouse_genomes_project 10 86575595 86585949 + Ccdc53 protein_coding processed_transcript MGP_BALBcJ_T0006135.1 MGP_BALBcJ_G0005123.1 mouse_genomes_project 10 117718916 117729788 + 1700064J06Rik lincRNA lincRNA MGP_BALBcJ_T0025012.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39517320 39621547 - MGP_BALBcJ_P0025012 protein_coding protein_coding MGP_BALBcJ_T0025013.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39517323 39579236 - protein_coding retained_intron MGP_BALBcJ_T0025014.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39517330 39621226 - MGP_BALBcJ_P0025014 protein_coding protein_coding MGP_BALBcJ_T0025015.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39518379 39578614 - protein_coding retained_intron MGP_BALBcJ_T0025016.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39519135 39621553 - MGP_BALBcJ_P0025016 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025017.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39589105 39596409 - MGP_BALBcJ_P0025017 protein_coding protein_coding MGP_BALBcJ_T0025018.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39602894 39621224 - MGP_BALBcJ_P0025018 protein_coding protein_coding MGP_BALBcJ_T0025019.1 MGP_BALBcJ_G0017121.1 mouse_genomes_project 10 39603435 39621226 - MGP_BALBcJ_P0025019 protein_coding protein_coding MGP_BALBcJ_T0003062.1 MGP_BALBcJ_G0002857.1 mouse_genomes_project 10 86786779 86792431 - Gm16235 antisense antisense MGP_BALBcJ_T0003063.1 MGP_BALBcJ_G0002857.1 mouse_genomes_project 10 86787697 86788478 - Gm16235 antisense antisense MGP_BALBcJ_T0027183.1 MGP_BALBcJ_G0017715.1 mouse_genomes_project 10 119441141 119454232 + MGP_BALBcJ_P0027183 4921513I03Rik protein_coding protein_coding MGP_BALBcJ_T0006099.1 MGP_BALBcJ_G0005106.1 mouse_genomes_project 10 89519918 89520998 + Gm26765 lincRNA lincRNA MGP_BALBcJ_T0027543.1 MGP_BALBcJ_G0017853.1 mouse_genomes_project 10 128380572 128381511 + MGP_BALBcJ_P0027543 Olfr789 protein_coding protein_coding MGP_BALBcJ_T0003002.1 MGP_BALBcJ_G0002811.1 mouse_genomes_project 10 37098850 37101087 - Gm16364 antisense antisense MGP_BALBcJ_T0025132.1 MGP_BALBcJ_G0017162.1 mouse_genomes_project 10 50132474 50145135 + MGP_BALBcJ_P0025132 Nepn protein_coding protein_coding MGP_BALBcJ_T0025133.1 MGP_BALBcJ_G0017162.1 mouse_genomes_project 10 50135096 50148786 + MGP_BALBcJ_P0025133 Nepn protein_coding protein_coding MGP_BALBcJ_T0025398.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60160572 60199957 - MGP_BALBcJ_P0025398 Kif1bp protein_coding protein_coding MGP_BALBcJ_T0025399.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60161601 60192582 - MGP_BALBcJ_P0025399 Kif1bp protein_coding protein_coding MGP_BALBcJ_T0025400.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60180838 60199894 - MGP_BALBcJ_P0025400 Kif1bp protein_coding protein_coding MGP_BALBcJ_T0025401.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60180912 60188491 - MGP_BALBcJ_P0025401 Kif1bp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025402.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60181968 60185948 - Kif1bp protein_coding retained_intron MGP_BALBcJ_T0025403.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60188240 60192570 - Kif1bp protein_coding retained_intron MGP_BALBcJ_T0025404.1 MGP_BALBcJ_G0017239.1 mouse_genomes_project 10 60192216 60199911 - Kif1bp protein_coding retained_intron MGP_BALBcJ_T0025223.1 MGP_BALBcJ_G0017197.1 mouse_genomes_project 10 57140485 57140821 + MGP_BALBcJ_P0025223 Gm10322 protein_coding protein_coding MGP_BALBcJ_T0024787.1 MGP_BALBcJ_G0017042.1 mouse_genomes_project 10 23666898 23709843 + MGP_BALBcJ_P0024787 Samd3 protein_coding protein_coding MGP_BALBcJ_T0024788.1 MGP_BALBcJ_G0017042.1 mouse_genomes_project 10 23666898 23698033 + MGP_BALBcJ_P0024788 Samd3 protein_coding protein_coding MGP_BALBcJ_T0024908.1 MGP_BALBcJ_G0017089.1 mouse_genomes_project 10 36657324 36674693 + MGP_BALBcJ_P0024908 Tube1 protein_coding protein_coding MGP_BALBcJ_T0003034.1 MGP_BALBcJ_G0002835.1 mouse_genomes_project 10 74342587 74358938 - 4930483K19Rik antisense antisense MGP_BALBcJ_T0024859.1 MGP_BALBcJ_G0017069.1 mouse_genomes_project 10 31324145 31335364 + MGP_BALBcJ_P0024859 Rsph4a protein_coding protein_coding MGP_BALBcJ_T0100428.1 MGP_BALBcJ_G0038464.1 mouse_genomes_project 10 24905087 24905159 + Gm23353 snoRNA snoRNA MGP_BALBcJ_T0026291.1 MGP_BALBcJ_G0017462.1 mouse_genomes_project 10 78833065 78837503 + MGP_BALBcJ_P0026291 Oaz1 protein_coding protein_coding MGP_BALBcJ_T0026292.1 MGP_BALBcJ_G0017462.1 mouse_genomes_project 10 78833091 78837497 + Oaz1 protein_coding retained_intron MGP_BALBcJ_T0026293.1 MGP_BALBcJ_G0017462.1 mouse_genomes_project 10 78833092 78837170 + MGP_BALBcJ_P0026293 Oaz1 protein_coding protein_coding MGP_BALBcJ_T0026294.1 MGP_BALBcJ_G0017462.1 mouse_genomes_project 10 78833095 78837503 + MGP_BALBcJ_P0026294 Oaz1 protein_coding protein_coding MGP_BALBcJ_T0026295.1 MGP_BALBcJ_G0017462.1 mouse_genomes_project 10 78834121 78837190 + MGP_BALBcJ_P0026295 Oaz1 protein_coding protein_coding MGP_BALBcJ_T0026296.1 MGP_BALBcJ_G0017462.1 mouse_genomes_project 10 78834490 78837217 + MGP_BALBcJ_P0026296 Oaz1 protein_coding protein_coding MGP_BALBcJ_T0025062.1 MGP_BALBcJ_G0017132.1 mouse_genomes_project 10 41110539 41151627 + MGP_BALBcJ_P0025062 Bend3 protein_coding protein_coding MGP_BALBcJ_T0025063.1 MGP_BALBcJ_G0017132.1 mouse_genomes_project 10 41110539 41146967 + MGP_BALBcJ_P0025063 Bend3 protein_coding protein_coding MGP_BALBcJ_T0025000.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39315612 39413425 - MGP_BALBcJ_P0025000 Cep57l1 protein_coding protein_coding MGP_BALBcJ_T0025001.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39315617 39413419 - MGP_BALBcJ_P0025001 Cep57l1 protein_coding protein_coding MGP_BALBcJ_T0025002.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39315617 39413419 - MGP_BALBcJ_P0025002 Cep57l1 protein_coding protein_coding MGP_BALBcJ_T0025003.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39316466 39413459 - MGP_BALBcJ_P0025003 Cep57l1 protein_coding protein_coding MGP_BALBcJ_T0025004.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39316618 39413434 - MGP_BALBcJ_P0025004 Cep57l1 protein_coding protein_coding MGP_BALBcJ_T0025005.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39317944 39319683 - MGP_BALBcJ_P0025005 Cep57l1 protein_coding protein_coding MGP_BALBcJ_T0025006.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39322334 39325720 - Cep57l1 protein_coding retained_intron MGP_BALBcJ_T0025007.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39325295 39343253 - Cep57l1 protein_coding retained_intron MGP_BALBcJ_T0025008.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39339316 39413424 - Cep57l1 protein_coding retained_intron MGP_BALBcJ_T0025009.1 MGP_BALBcJ_G0017119.1 mouse_genomes_project 10 39341354 39413442 - Cep57l1 protein_coding retained_intron MGP_BALBcJ_T0003035.1 MGP_BALBcJ_G0002836.1 mouse_genomes_project 10 74361476 74367786 - Gm15343 antisense antisense MGP_BALBcJ_T0026830.1 MGP_BALBcJ_G0017595.1 mouse_genomes_project 10 91926029 91970262 + MGP_BALBcJ_P0026830 Ccdc38 protein_coding protein_coding MGP_BALBcJ_T0026831.1 MGP_BALBcJ_G0017595.1 mouse_genomes_project 10 91935434 91940768 + Ccdc38 protein_coding retained_intron MGP_BALBcJ_T0026832.1 MGP_BALBcJ_G0017595.1 mouse_genomes_project 10 91940011 91940813 + Ccdc38 protein_coding retained_intron MGP_BALBcJ_T0026833.1 MGP_BALBcJ_G0017595.1 mouse_genomes_project 10 91940014 91968607 + Ccdc38 protein_coding processed_transcript MGP_BALBcJ_T0026834.1 MGP_BALBcJ_G0017595.1 mouse_genomes_project 10 91950262 91959636 + Ccdc38 protein_coding processed_transcript MGP_BALBcJ_T0025984.1 MGP_BALBcJ_G0017386.1 mouse_genomes_project 10 77553091 77564380 - MGP_BALBcJ_P0025984 Theg protein_coding protein_coding MGP_BALBcJ_T0025985.1 MGP_BALBcJ_G0017386.1 mouse_genomes_project 10 77553189 77556833 - Theg protein_coding retained_intron MGP_BALBcJ_T0025986.1 MGP_BALBcJ_G0017386.1 mouse_genomes_project 10 77553189 77564575 - MGP_BALBcJ_P0025986 Theg protein_coding protein_coding MGP_BALBcJ_T0027531.1 MGP_BALBcJ_G0017844.1 mouse_genomes_project 10 128113787 128115952 - MGP_BALBcJ_P0027531 Olfr777 protein_coding protein_coding MGP_BALBcJ_T0027532.1 MGP_BALBcJ_G0017844.1 mouse_genomes_project 10 128113787 128114723 - MGP_BALBcJ_P0027532 Olfr777 protein_coding protein_coding MGP_BALBcJ_T0026873.1 MGP_BALBcJ_G0017604.1 mouse_genomes_project 10 92591124 92613107 + MGP_BALBcJ_P0026873 Ndufa12 protein_coding protein_coding MGP_BALBcJ_T0026874.1 MGP_BALBcJ_G0017604.1 mouse_genomes_project 10 92591128 92595824 + Ndufa12 protein_coding retained_intron MGP_BALBcJ_T0026875.1 MGP_BALBcJ_G0017604.1 mouse_genomes_project 10 92592357 92612407 + MGP_BALBcJ_P0026875 Ndufa12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100461.1 MGP_BALBcJ_G0038497.1 mouse_genomes_project 10 104411536 104411668 - Gm24237 snoRNA snoRNA MGP_BALBcJ_T0024795.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24437457 24445904 - Lama2 protein_coding retained_intron MGP_BALBcJ_T0024796.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24438706 25067760 - MGP_BALBcJ_P0024796 Lama2 protein_coding protein_coding MGP_BALBcJ_T0024797.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24438812 25067713 - MGP_BALBcJ_P0024797 Lama2 protein_coding unknown_likely_coding MGP_BALBcJ_T0024798.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24647161 25067713 - MGP_BALBcJ_P0024798 Lama2 protein_coding protein_coding MGP_BALBcJ_T0024799.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24720320 25067859 - Lama2 protein_coding retained_intron MGP_BALBcJ_T0024800.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24801487 25067783 - Lama2 protein_coding retained_intron MGP_BALBcJ_T0024801.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24875207 25070675 - Lama2 protein_coding retained_intron MGP_BALBcJ_T0024802.1 MGP_BALBcJ_G0017045.1 mouse_genomes_project 10 24922836 25067783 - Lama2 protein_coding processed_transcript MGP_BALBcJ_T0027258.1 MGP_BALBcJ_G0017742.1 mouse_genomes_project 10 125806661 125811667 - MGP_BALBcJ_P0027258 March9 protein_coding protein_coding MGP_BALBcJ_T0009573.1 MGP_BALBcJ_G0007698.1 mouse_genomes_project 10 76313042 76313105 - Mir6908 miRNA miRNA MGP_BALBcJ_T0024932.1 MGP_BALBcJ_G0017096.1 mouse_genomes_project 10 37515781 37530267 - MGP_BALBcJ_P0024932 Mfsd4b3 protein_coding protein_coding MGP_BALBcJ_T0003036.1 MGP_BALBcJ_G0002837.1 mouse_genomes_project 10 77844528 77845026 - Gm17134 antisense antisense MGP_BALBcJ_T0099169.1 MGP_BALBcJ_G0037205.1 mouse_genomes_project 10 10920543 10920650 - Gm22995 snRNA snRNA MGP_BALBcJ_T0027287.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126038853 126045788 - MGP_BALBcJ_P0027287 Mbd6 protein_coding protein_coding MGP_BALBcJ_T0027288.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126038853 126040566 - MGP_BALBcJ_P0027288 Mbd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027289.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126038853 126042798 - MGP_BALBcJ_P0027289 Mbd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027290.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126038853 126046177 - MGP_BALBcJ_P0027290 Mbd6 protein_coding protein_coding MGP_BALBcJ_T0027291.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126039573 126041256 - MGP_BALBcJ_P0027291 Mbd6 protein_coding protein_coding MGP_BALBcJ_T0027292.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126040423 126041269 - MGP_BALBcJ_P0027292 Mbd6 protein_coding protein_coding MGP_BALBcJ_T0027293.1 MGP_BALBcJ_G0017754.1 mouse_genomes_project 10 126043465 126045751 - MGP_BALBcJ_P0027293 Mbd6 protein_coding protein_coding MGP_BALBcJ_T0025735.1 MGP_BALBcJ_G0017305.1 mouse_genomes_project 10 73637050 73637948 - MGP_BALBcJ_P0025735 Mif protein_coding protein_coding MGP_BALBcJ_T0024519.1 MGP_BALBcJ_G0016951.1 mouse_genomes_project 10 9378139 9534657 - MGP_BALBcJ_P0024519 Utrn protein_coding unknown_likely_coding MGP_BALBcJ_T0024520.1 MGP_BALBcJ_G0016951.1 mouse_genomes_project 10 9378141 9856230 - MGP_BALBcJ_P0024520 Utrn protein_coding protein_coding MGP_BALBcJ_T0024521.1 MGP_BALBcJ_G0016951.1 mouse_genomes_project 10 9610493 9862939 - MGP_BALBcJ_P0024521 Utrn protein_coding unknown_likely_coding MGP_BALBcJ_T0024824.1 MGP_BALBcJ_G0017053.1 mouse_genomes_project 10 26801342 26820107 - MGP_BALBcJ_P0024824 Rnf146 protein_coding protein_coding MGP_BALBcJ_T0024825.1 MGP_BALBcJ_G0017053.1 mouse_genomes_project 10 26803335 26820107 - MGP_BALBcJ_P0024825 Rnf146 protein_coding protein_coding MGP_BALBcJ_T0024826.1 MGP_BALBcJ_G0017053.1 mouse_genomes_project 10 26803340 26819705 - MGP_BALBcJ_P0024826 Rnf146 protein_coding protein_coding MGP_BALBcJ_T0024827.1 MGP_BALBcJ_G0017053.1 mouse_genomes_project 10 26803822 26815383 - MGP_BALBcJ_P0024827 Rnf146 protein_coding protein_coding MGP_BALBcJ_T0024828.1 MGP_BALBcJ_G0017053.1 mouse_genomes_project 10 26804383 26819688 - MGP_BALBcJ_P0024828 Rnf146 protein_coding protein_coding MGP_BALBcJ_T0026056.1 MGP_BALBcJ_G0017405.1 mouse_genomes_project 10 77855750 77864316 + Prtn3 protein_coding processed_transcript MGP_BALBcJ_T0026057.1 MGP_BALBcJ_G0017405.1 mouse_genomes_project 10 77860888 77864449 + MGP_BALBcJ_P0026057 Prtn3 protein_coding protein_coding MGP_BALBcJ_T0026058.1 MGP_BALBcJ_G0017405.1 mouse_genomes_project 10 77862254 77864449 + Prtn3 protein_coding retained_intron MGP_BALBcJ_T0026059.1 MGP_BALBcJ_G0017405.1 mouse_genomes_project 10 77862278 77863664 + Prtn3 protein_coding retained_intron MGP_BALBcJ_T0026060.1 MGP_BALBcJ_G0017405.1 mouse_genomes_project 10 77862316 77864119 + MGP_BALBcJ_P0026060 Prtn3 protein_coding protein_coding MGP_BALBcJ_T0026061.1 MGP_BALBcJ_G0017405.1 mouse_genomes_project 10 77863057 77864155 + Prtn3 protein_coding retained_intron MGP_BALBcJ_T0027538.1 MGP_BALBcJ_G0017849.1 mouse_genomes_project 10 128306842 128307781 + MGP_BALBcJ_P0027538 Gm44444 protein_coding protein_coding MGP_BALBcJ_T0000813.1 MGP_BALBcJ_G0000746.1 mouse_genomes_project 10 74782768 74783446 - TEC TEC MGP_BALBcJ_T0025143.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51403940 51519249 - MGP_BALBcJ_P0025143 Fam184a protein_coding protein_coding MGP_BALBcJ_T0025144.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51404161 51462561 - MGP_BALBcJ_P0025144 Fam184a protein_coding protein_coding MGP_BALBcJ_T0025145.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51404164 51425382 - MGP_BALBcJ_P0025145 Fam184a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025146.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51404165 51467081 - MGP_BALBcJ_P0025146 Fam184a protein_coding protein_coding MGP_BALBcJ_T0025147.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51404425 51417543 - MGP_BALBcJ_P0025147 Fam184a protein_coding protein_coding MGP_BALBcJ_T0025148.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51404429 51409023 - MGP_BALBcJ_P0025148 Fam184a protein_coding protein_coding MGP_BALBcJ_T0025149.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51408933 51446434 - Fam184a protein_coding processed_transcript MGP_BALBcJ_T0025150.1 MGP_BALBcJ_G0017169.1 mouse_genomes_project 10 51464734 51519278 - Fam184a protein_coding retained_intron MGP_BALBcJ_T0025753.1 MGP_BALBcJ_G0017312.1 mouse_genomes_project 10 73818167 73831256 + MGP_BALBcJ_P0025753 Zfp280b protein_coding protein_coding MGP_BALBcJ_T0006081.1 MGP_BALBcJ_G0005091.1 mouse_genomes_project 10 64609507 64618147 - 1110002J07Rik lincRNA lincRNA MGP_BALBcJ_T0100476.1 MGP_BALBcJ_G0038512.1 mouse_genomes_project 10 128181774 128181908 + Gm25764 snoRNA snoRNA MGP_BALBcJ_T0026991.1 MGP_BALBcJ_G0017649.1 mouse_genomes_project 10 105958623 105961840 - MGP_BALBcJ_P0026991 Myf5 protein_coding protein_coding MGP_BALBcJ_T0026271.1 MGP_BALBcJ_G0017454.1 mouse_genomes_project 10 78690439 78706988 - MGP_BALBcJ_P0026271 Mob3a protein_coding protein_coding MGP_BALBcJ_T0027229.1 MGP_BALBcJ_G0017731.1 mouse_genomes_project 10 121831423 121918695 - MGP_BALBcJ_P0027229 Usp15 protein_coding protein_coding MGP_BALBcJ_T0025010.1 MGP_BALBcJ_G0017120.1 mouse_genomes_project 10 39414385 39510343 + MGP_BALBcJ_P0025010 Sesn1 protein_coding protein_coding MGP_BALBcJ_T0025011.1 MGP_BALBcJ_G0017120.1 mouse_genomes_project 10 39488812 39510343 + MGP_BALBcJ_P0025011 Sesn1 protein_coding protein_coding MGP_BALBcJ_T0027184.1 MGP_BALBcJ_G0017716.1 mouse_genomes_project 10 119456460 119577102 - MGP_BALBcJ_P0027184 Msrb3 protein_coding protein_coding MGP_BALBcJ_T0027185.1 MGP_BALBcJ_G0017716.1 mouse_genomes_project 10 119459130 119526855 - Msrb3 protein_coding processed_transcript MGP_BALBcJ_T0027186.1 MGP_BALBcJ_G0017716.1 mouse_genomes_project 10 119459272 119550929 - MGP_BALBcJ_P0027186 Msrb3 protein_coding protein_coding MGP_BALBcJ_T0101836.1 MGP_BALBcJ_G0039761.1 mouse_genomes_project 10 19254528 19257429 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0009621.1 MGP_BALBcJ_G0007746.1 mouse_genomes_project 10 127324957 127325020 - Mir6916 miRNA miRNA MGP_BALBcJ_T0027365.1 MGP_BALBcJ_G0017775.1 mouse_genomes_project 10 126533392 126566365 + MGP_BALBcJ_P0027365 Gm28046 protein_coding protein_coding MGP_BALBcJ_T0025937.1 MGP_BALBcJ_G0017362.1 mouse_genomes_project 10 76292176 76294126 + MGP_BALBcJ_P0025937 Cstb protein_coding protein_coding MGP_BALBcJ_T0006045.1 MGP_BALBcJ_G0005064.1 mouse_genomes_project 10 8233846 8272028 - 4930432B10Rik lincRNA lincRNA MGP_BALBcJ_T0006046.1 MGP_BALBcJ_G0005064.1 mouse_genomes_project 10 8245352 8272250 - 4930432B10Rik lincRNA lincRNA MGP_BALBcJ_T0006140.1 MGP_BALBcJ_G0005128.1 mouse_genomes_project 10 127461248 127464939 + Gm26876 lincRNA lincRNA MGP_BALBcJ_T0026193.1 MGP_BALBcJ_G0017435.1 mouse_genomes_project 10 78314213 78316497 - MGP_BALBcJ_P0026193 2310011J03Rik protein_coding protein_coding MGP_BALBcJ_T0012394.1 MGP_BALBcJ_G0010491.1 mouse_genomes_project 10 58901379 58901741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026904.1 MGP_BALBcJ_G0017615.1 mouse_genomes_project 10 94381392 94487217 + MGP_BALBcJ_P0026904 Eea1 protein_coding protein_coding MGP_BALBcJ_T0009605.1 MGP_BALBcJ_G0007730.1 mouse_genomes_project 10 119110709 119110829 - Mir763 miRNA miRNA MGP_BALBcJ_T0099213.1 MGP_BALBcJ_G0037249.1 mouse_genomes_project 10 102764306 102764368 - Gm22339 snRNA snRNA MGP_BALBcJ_T0099170.1 MGP_BALBcJ_G0037206.1 mouse_genomes_project 10 14209125 14209222 + Gm25382 snRNA snRNA MGP_BALBcJ_T0003046.1 MGP_BALBcJ_G0002844.1 mouse_genomes_project 10 79324378 79325595 - Gm16315 antisense antisense MGP_BALBcJ_T0027574.1 MGP_BALBcJ_G0017875.1 mouse_genomes_project 10 128834968 128839312 - MGP_BALBcJ_P0027574 Olfr816 protein_coding protein_coding MGP_BALBcJ_T0026313.1 MGP_BALBcJ_G0017471.1 mouse_genomes_project 10 79029287 79035093 - MGP_BALBcJ_P0026313 Diras1 protein_coding protein_coding MGP_BALBcJ_T0026314.1 MGP_BALBcJ_G0017471.1 mouse_genomes_project 10 79031789 79035358 - MGP_BALBcJ_P0026314 Diras1 protein_coding protein_coding MGP_BALBcJ_T0100467.1 MGP_BALBcJ_G0038503.1 mouse_genomes_project 10 109971141 109971285 + Gm25117 snoRNA snoRNA MGP_BALBcJ_T0003071.1 MGP_BALBcJ_G0002862.1 mouse_genomes_project 10 113319896 113347258 + 4930473D10Rik antisense antisense MGP_BALBcJ_T0024558.1 MGP_BALBcJ_G0016958.1 mouse_genomes_project 10 10522910 10524550 + MGP_BALBcJ_P0024558 Fuca2 protein_coding protein_coding MGP_BALBcJ_T0024559.1 MGP_BALBcJ_G0016958.1 mouse_genomes_project 10 10522914 10530110 + MGP_BALBcJ_P0024559 Fuca2 protein_coding protein_coding MGP_BALBcJ_T0024560.1 MGP_BALBcJ_G0016958.1 mouse_genomes_project 10 10524373 10539773 + MGP_BALBcJ_P0024560 Fuca2 protein_coding protein_coding MGP_BALBcJ_T0024561.1 MGP_BALBcJ_G0016958.1 mouse_genomes_project 10 10524373 10543267 + MGP_BALBcJ_P0024561 Fuca2 protein_coding protein_coding MGP_BALBcJ_T0024562.1 MGP_BALBcJ_G0016958.1 mouse_genomes_project 10 10524456 10537328 + Fuca2 protein_coding retained_intron MGP_BALBcJ_T0024563.1 MGP_BALBcJ_G0016958.1 mouse_genomes_project 10 10530266 10539728 + Fuca2 protein_coding processed_transcript MGP_BALBcJ_T0102113.1 MGP_BALBcJ_G0039930.1 mouse_genomes_project 10 21407739 21408272 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0024760.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287095 22333100 + MGP_BALBcJ_P0024760 Med23 protein_coding protein_coding MGP_BALBcJ_T0024761.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287146 22313689 + Med23 protein_coding retained_intron MGP_BALBcJ_T0024762.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287146 22326178 + MGP_BALBcJ_P0024762 Med23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024763.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287156 22332878 + MGP_BALBcJ_P0024763 Med23 protein_coding protein_coding MGP_BALBcJ_T0024764.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287207 22317858 + Med23 protein_coding processed_transcript MGP_BALBcJ_T0024765.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287418 22295893 + MGP_BALBcJ_P0024765 Med23 protein_coding protein_coding MGP_BALBcJ_T0024766.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22287751 22293133 + Med23 protein_coding retained_intron MGP_BALBcJ_T0024767.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22294407 22311941 + MGP_BALBcJ_P0024767 Med23 protein_coding protein_coding MGP_BALBcJ_T0024768.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22307799 22332437 + MGP_BALBcJ_P0024768 Med23 protein_coding protein_coding MGP_BALBcJ_T0024769.1 MGP_BALBcJ_G0017035.1 mouse_genomes_project 10 22310311 22311933 + Med23 protein_coding retained_intron MGP_BALBcJ_T0025924.1 MGP_BALBcJ_G0017359.1 mouse_genomes_project 10 76054790 76112751 - MGP_BALBcJ_P0025924 Trappc10 protein_coding protein_coding MGP_BALBcJ_T0012390.1 MGP_BALBcJ_G0010487.1 mouse_genomes_project 10 55602517 55602965 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025796.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563351 74628408 - MGP_BALBcJ_P0025796 Pcbp3 protein_coding unknown_likely_coding MGP_BALBcJ_T0025797.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563356 74761390 - MGP_BALBcJ_P0025797 Pcbp3 protein_coding protein_coding MGP_BALBcJ_T0025798.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563357 74624259 - Pcbp3 protein_coding processed_transcript MGP_BALBcJ_T0025799.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563357 74627331 - MGP_BALBcJ_P0025799 Pcbp3 protein_coding protein_coding MGP_BALBcJ_T0025800.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563359 74761489 - MGP_BALBcJ_P0025800 Pcbp3 protein_coding protein_coding MGP_BALBcJ_T0025801.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563731 74599353 - Pcbp3 protein_coding processed_transcript MGP_BALBcJ_T0025802.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74563869 74589911 - MGP_BALBcJ_P0025802 Pcbp3 protein_coding protein_coding MGP_BALBcJ_T0025803.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74564804 74618181 - MGP_BALBcJ_P0025803 Pcbp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025804.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74591291 74706514 - Pcbp3 protein_coding processed_transcript MGP_BALBcJ_T0025805.1 MGP_BALBcJ_G0017327.1 mouse_genomes_project 10 74599336 74620869 - Pcbp3 protein_coding processed_transcript MGP_BALBcJ_T0000823.1 MGP_BALBcJ_G0000755.1 mouse_genomes_project 10 108519015 108519307 - TEC TEC MGP_BALBcJ_T0026356.1 MGP_BALBcJ_G0017483.1 mouse_genomes_project 10 79224195 79252428 - MGP_BALBcJ_P0026356 Atcay protein_coding protein_coding MGP_BALBcJ_T0026357.1 MGP_BALBcJ_G0017483.1 mouse_genomes_project 10 79224195 79252380 - MGP_BALBcJ_P0026357 Atcay protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026358.1 MGP_BALBcJ_G0017483.1 mouse_genomes_project 10 79229547 79233010 - Atcay protein_coding retained_intron MGP_BALBcJ_T0026617.1 MGP_BALBcJ_G0017549.1 mouse_genomes_project 10 84236754 84290837 - MGP_BALBcJ_P0026617 Bpifc protein_coding protein_coding MGP_BALBcJ_T0026618.1 MGP_BALBcJ_G0017549.1 mouse_genomes_project 10 84273270 84290798 - MGP_BALBcJ_P0026618 Bpifc protein_coding protein_coding MGP_BALBcJ_T0025961.1 MGP_BALBcJ_G0017377.1 mouse_genomes_project 10 76882512 76888263 + MGP_BALBcJ_P0025961 Olfr1351 protein_coding protein_coding MGP_BALBcJ_T0025962.1 MGP_BALBcJ_G0017377.1 mouse_genomes_project 10 76887303 76888263 + MGP_BALBcJ_P0025962 Olfr1351 protein_coding protein_coding MGP_BALBcJ_T0006085.1 MGP_BALBcJ_G0005095.1 mouse_genomes_project 10 75300818 75331172 + 2810425M01Rik lincRNA lincRNA MGP_BALBcJ_T0012372.1 MGP_BALBcJ_G0010469.1 mouse_genomes_project 10 23278387 23279005 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009588.1 MGP_BALBcJ_G0007713.1 mouse_genomes_project 10 83564027 83564131 + Gm25281 miRNA miRNA MGP_BALBcJ_T0026669.1 MGP_BALBcJ_G0017564.1 mouse_genomes_project 10 86437278 86486873 - MGP_BALBcJ_P0026669 Parpbp protein_coding protein_coding MGP_BALBcJ_T0026670.1 MGP_BALBcJ_G0017564.1 mouse_genomes_project 10 86466196 86486810 - MGP_BALBcJ_P0026670 Parpbp protein_coding protein_coding MGP_BALBcJ_T0026671.1 MGP_BALBcJ_G0017564.1 mouse_genomes_project 10 86466216 86486865 - MGP_BALBcJ_P0026671 Parpbp protein_coding protein_coding MGP_BALBcJ_T0026672.1 MGP_BALBcJ_G0017564.1 mouse_genomes_project 10 86472406 86486810 - MGP_BALBcJ_P0026672 Parpbp protein_coding protein_coding MGP_BALBcJ_T0006142.1 MGP_BALBcJ_G0005130.1 mouse_genomes_project 10 127901350 127905414 - lincRNA lincRNA MGP_BALBcJ_T0000826.1 MGP_BALBcJ_G0000758.1 mouse_genomes_project 10 112908904 112909219 + TEC TEC MGP_BALBcJ_T0026241.1 MGP_BALBcJ_G0017444.1 mouse_genomes_project 10 78495206 78518683 + MGP_BALBcJ_P0026241 Onecut3 protein_coding protein_coding MGP_BALBcJ_T0026219.1 MGP_BALBcJ_G0017441.1 mouse_genomes_project 10 78392011 78398699 - MGP_BALBcJ_P0026219 Mbd3 protein_coding protein_coding MGP_BALBcJ_T0026220.1 MGP_BALBcJ_G0017441.1 mouse_genomes_project 10 78392012 78399018 - MGP_BALBcJ_P0026220 Mbd3 protein_coding protein_coding MGP_BALBcJ_T0026221.1 MGP_BALBcJ_G0017441.1 mouse_genomes_project 10 78392312 78398890 - MGP_BALBcJ_P0026221 Mbd3 protein_coding protein_coding MGP_BALBcJ_T0026222.1 MGP_BALBcJ_G0017441.1 mouse_genomes_project 10 78392455 78395193 - MGP_BALBcJ_P0026222 Mbd3 protein_coding protein_coding MGP_BALBcJ_T0026223.1 MGP_BALBcJ_G0017441.1 mouse_genomes_project 10 78393368 78394800 - Mbd3 protein_coding processed_transcript MGP_BALBcJ_T0003049.1 MGP_BALBcJ_G0002847.1 mouse_genomes_project 10 79604622 79607951 - Gm15917 antisense antisense MGP_BALBcJ_T0017095.1 MGP_BALBcJ_G0015080.1 mouse_genomes_project 10 126045411 126046840 + Gm20492 processed_transcript processed_transcript MGP_BALBcJ_T0011246.1 MGP_BALBcJ_G0009371.1 mouse_genomes_project 10 38475600 38475843 - Gm22948 misc_RNA misc_RNA MGP_BALBcJ_T0024735.1 MGP_BALBcJ_G0017017.1 mouse_genomes_project 10 21303688 21306700 + MGP_BALBcJ_P0024735 Taar2 protein_coding protein_coding MGP_BALBcJ_T0027238.1 MGP_BALBcJ_G0017737.1 mouse_genomes_project 10 125752188 125772314 + MGP_BALBcJ_P0027238 Avil protein_coding protein_coding MGP_BALBcJ_T0027239.1 MGP_BALBcJ_G0017737.1 mouse_genomes_project 10 125752218 125757840 + MGP_BALBcJ_P0027239 Avil protein_coding protein_coding MGP_BALBcJ_T0027240.1 MGP_BALBcJ_G0017737.1 mouse_genomes_project 10 125754480 125757912 + MGP_BALBcJ_P0027240 Avil protein_coding protein_coding MGP_BALBcJ_T0027241.1 MGP_BALBcJ_G0017737.1 mouse_genomes_project 10 125754614 125772098 + MGP_BALBcJ_P0027241 Avil protein_coding protein_coding MGP_BALBcJ_T0025913.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75907782 75911739 + Dnmt3l protein_coding processed_transcript MGP_BALBcJ_T0025914.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75908122 75930048 + MGP_BALBcJ_P0025914 Dnmt3l protein_coding protein_coding MGP_BALBcJ_T0025915.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75916303 75930048 + MGP_BALBcJ_P0025915 Dnmt3l protein_coding protein_coding MGP_BALBcJ_T0025916.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75916420 75930042 + MGP_BALBcJ_P0025916 Dnmt3l protein_coding protein_coding MGP_BALBcJ_T0025917.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75921296 75923825 + Dnmt3l protein_coding retained_intron MGP_BALBcJ_T0025918.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75921796 75930041 + MGP_BALBcJ_P0025918 Dnmt3l protein_coding protein_coding MGP_BALBcJ_T0025919.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75921796 75930041 + MGP_BALBcJ_P0025919 Dnmt3l protein_coding protein_coding MGP_BALBcJ_T0025920.1 MGP_BALBcJ_G0017355.1 mouse_genomes_project 10 75921796 75930041 + MGP_BALBcJ_P0025920 Dnmt3l protein_coding protein_coding MGP_BALBcJ_T0027371.1 MGP_BALBcJ_G0017780.1 mouse_genomes_project 10 126666221 126670961 - MGP_BALBcJ_P0027371 Rdh7 protein_coding protein_coding MGP_BALBcJ_T0025578.1 MGP_BALBcJ_G0017275.1 mouse_genomes_project 10 68187456 68303011 + MGP_BALBcJ_P0025578 Fam13c protein_coding protein_coding MGP_BALBcJ_T0025579.1 MGP_BALBcJ_G0017275.1 mouse_genomes_project 10 68187668 68303011 + MGP_BALBcJ_P0025579 Fam13c protein_coding protein_coding MGP_BALBcJ_T0025580.1 MGP_BALBcJ_G0017275.1 mouse_genomes_project 10 68187714 68303013 + MGP_BALBcJ_P0025580 Fam13c protein_coding protein_coding MGP_BALBcJ_T0101606.1 MGP_BALBcJ_G0039627.1 mouse_genomes_project 10 87075243 87076804 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101607.1 MGP_BALBcJ_G0039627.1 mouse_genomes_project 10 87076022 87076419 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0026932.1 MGP_BALBcJ_G0017633.1 mouse_genomes_project 10 98903966 98946444 - MGP_BALBcJ_P0026932 Tmtc3 protein_coding protein_coding MGP_BALBcJ_T0026933.1 MGP_BALBcJ_G0017633.1 mouse_genomes_project 10 98906817 98946441 - MGP_BALBcJ_P0026933 Tmtc3 protein_coding protein_coding MGP_BALBcJ_T0026934.1 MGP_BALBcJ_G0017633.1 mouse_genomes_project 10 98934394 98946433 - Tmtc3 protein_coding retained_intron MGP_BALBcJ_T0026935.1 MGP_BALBcJ_G0017633.1 mouse_genomes_project 10 98935613 98946361 - MGP_BALBcJ_P0026935 Tmtc3 protein_coding protein_coding MGP_BALBcJ_T0026936.1 MGP_BALBcJ_G0017633.1 mouse_genomes_project 10 98936949 98946420 - MGP_BALBcJ_P0026936 Tmtc3 protein_coding protein_coding MGP_BALBcJ_T0024719.1 MGP_BALBcJ_G0017009.1 mouse_genomes_project 10 20091356 20118849 - MGP_BALBcJ_P0024719 Tbpl1 protein_coding protein_coding MGP_BALBcJ_T0024720.1 MGP_BALBcJ_G0017009.1 mouse_genomes_project 10 20092855 20119340 - MGP_BALBcJ_P0024720 Tbpl1 protein_coding protein_coding MGP_BALBcJ_T0024721.1 MGP_BALBcJ_G0017009.1 mouse_genomes_project 10 20092997 20093860 - Tbpl1 protein_coding processed_transcript MGP_BALBcJ_T0024722.1 MGP_BALBcJ_G0017009.1 mouse_genomes_project 10 20099255 20118763 - Tbpl1 protein_coding retained_intron MGP_BALBcJ_T0025963.1 MGP_BALBcJ_G0017378.1 mouse_genomes_project 10 76904645 76905725 + MGP_BALBcJ_P0025963 Olfr57 protein_coding protein_coding MGP_BALBcJ_T0025316.1 MGP_BALBcJ_G0017216.1 mouse_genomes_project 10 58912676 58977963 - MGP_BALBcJ_P0025316 Pald1 protein_coding protein_coding MGP_BALBcJ_T0025507.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66872227 66966720 + MGP_BALBcJ_P0025507 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025508.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66926330 67006991 + MGP_BALBcJ_P0025508 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025510.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66930413 67008882 + MGP_BALBcJ_P0025510 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025511.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66930436 66990686 + Rhobtb1 protein_coding retained_intron MGP_BALBcJ_T0025512.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66930455 67007089 + MGP_BALBcJ_P0025512 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025513.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66930863 66983135 + MGP_BALBcJ_P0025513 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025514.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66930950 66966730 + MGP_BALBcJ_P0025514 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025515.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66930973 67008871 + MGP_BALBcJ_P0025515 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025516.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66933081 67006801 + MGP_BALBcJ_P0025516 Rhobtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025517.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66937149 66966735 + MGP_BALBcJ_P0025517 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025518.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66982581 66987374 + Rhobtb1 protein_coding processed_transcript MGP_BALBcJ_T0025519.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66996437 67007089 + MGP_BALBcJ_P0025519 Rhobtb1 protein_coding protein_coding MGP_BALBcJ_T0025520.1 MGP_BALBcJ_G0017269.1 mouse_genomes_project 10 66996550 67004000 + Rhobtb1 protein_coding processed_transcript MGP_BALBcJ_T0027553.1 MGP_BALBcJ_G0017861.1 mouse_genomes_project 10 128577990 128582130 - MGP_BALBcJ_P0027553 protein_coding protein_coding MGP_BALBcJ_T0027554.1 MGP_BALBcJ_G0017861.1 mouse_genomes_project 10 128580521 128582102 - protein_coding processed_transcript MGP_BALBcJ_T0024582.1 MGP_BALBcJ_G0016963.1 mouse_genomes_project 10 11434044 11579020 - MGP_BALBcJ_P0024582 Adgrg6 protein_coding protein_coding MGP_BALBcJ_T0024583.1 MGP_BALBcJ_G0016963.1 mouse_genomes_project 10 11436742 11569919 - MGP_BALBcJ_P0024583 Adgrg6 protein_coding unknown_likely_coding MGP_BALBcJ_T0027434.1 MGP_BALBcJ_G0017799.1 mouse_genomes_project 10 127147097 127171607 + MGP_BALBcJ_P0027434 Cs protein_coding protein_coding MGP_BALBcJ_T0003038.1 MGP_BALBcJ_G0002839.1 mouse_genomes_project 10 78370692 78371227 + Gm15123 antisense antisense MGP_BALBcJ_T0099184.1 MGP_BALBcJ_G0037220.1 mouse_genomes_project 10 44062187 44062294 + Gm25740 snRNA snRNA MGP_BALBcJ_T0026641.1 MGP_BALBcJ_G0017555.1 mouse_genomes_project 10 85049739 85121111 + MGP_BALBcJ_P0026641 Ttc41 protein_coding protein_coding MGP_BALBcJ_T0026642.1 MGP_BALBcJ_G0017555.1 mouse_genomes_project 10 85049739 85068743 + MGP_BALBcJ_P0026642 Ttc41 protein_coding protein_coding MGP_BALBcJ_T0025989.1 MGP_BALBcJ_G0017388.1 mouse_genomes_project 10 77596542 77601216 - Shc2 protein_coding retained_intron MGP_BALBcJ_T0025990.1 MGP_BALBcJ_G0017388.1 mouse_genomes_project 10 77598582 77601572 - Shc2 protein_coding retained_intron MGP_BALBcJ_T0025991.1 MGP_BALBcJ_G0017388.1 mouse_genomes_project 10 77599550 77616341 - MGP_BALBcJ_P0025991 Shc2 protein_coding protein_coding MGP_BALBcJ_T0026205.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78335323 78336299 - Adamtsl5 protein_coding processed_transcript MGP_BALBcJ_T0026206.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78336006 78345325 - Adamtsl5 protein_coding retained_intron MGP_BALBcJ_T0026207.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78336034 78342333 - Adamtsl5 protein_coding retained_intron MGP_BALBcJ_T0026208.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78337054 78345325 - Adamtsl5 protein_coding retained_intron MGP_BALBcJ_T0026209.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78337054 78345325 - MGP_BALBcJ_P0026209 Adamtsl5 protein_coding protein_coding MGP_BALBcJ_T0026210.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78338952 78345325 - MGP_BALBcJ_P0026210 Adamtsl5 protein_coding protein_coding MGP_BALBcJ_T0026211.1 MGP_BALBcJ_G0017438.1 mouse_genomes_project 10 78339219 78341452 - Adamtsl5 protein_coding processed_transcript MGP_BALBcJ_T0026194.1 MGP_BALBcJ_G0017436.1 mouse_genomes_project 10 78317194 78325361 - Pcsk4 protein_coding retained_intron MGP_BALBcJ_T0026195.1 MGP_BALBcJ_G0017436.1 mouse_genomes_project 10 78317194 78325363 - MGP_BALBcJ_P0026195 Pcsk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026196.1 MGP_BALBcJ_G0017436.1 mouse_genomes_project 10 78317194 78325406 - MGP_BALBcJ_P0026196 Pcsk4 protein_coding protein_coding MGP_BALBcJ_T0026197.1 MGP_BALBcJ_G0017436.1 mouse_genomes_project 10 78317198 78319039 - Pcsk4 protein_coding retained_intron MGP_BALBcJ_T0026198.1 MGP_BALBcJ_G0017436.1 mouse_genomes_project 10 78317198 78319038 - Pcsk4 protein_coding retained_intron MGP_BALBcJ_T0026199.1 MGP_BALBcJ_G0017436.1 mouse_genomes_project 10 78318033 78325307 - MGP_BALBcJ_P0026199 Pcsk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100456.1 MGP_BALBcJ_G0038492.1 mouse_genomes_project 10 92297668 92297824 - Gm25962 snoRNA snoRNA MGP_BALBcJ_T0017090.1 MGP_BALBcJ_G0015078.1 mouse_genomes_project 10 119018675 119041000 + 1700006J14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017091.1 MGP_BALBcJ_G0015078.1 mouse_genomes_project 10 119018675 119044611 + 1700006J14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017092.1 MGP_BALBcJ_G0015078.1 mouse_genomes_project 10 119018675 119043100 + 1700006J14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017093.1 MGP_BALBcJ_G0015078.1 mouse_genomes_project 10 119018706 119044102 + 1700006J14Rik processed_transcript processed_transcript MGP_BALBcJ_T0026902.1 MGP_BALBcJ_G0017613.1 mouse_genomes_project 10 93932470 93963917 + MGP_BALBcJ_P0026902 Ube2n protein_coding protein_coding MGP_BALBcJ_T0009585.1 MGP_BALBcJ_G0007710.1 mouse_genomes_project 10 79440395 79440453 - Mir1191b miRNA miRNA MGP_BALBcJ_T0026885.1 MGP_BALBcJ_G0017608.1 mouse_genomes_project 10 93186863 93342532 - MGP_BALBcJ_P0026885 Plxnc1 protein_coding protein_coding MGP_BALBcJ_T0026886.1 MGP_BALBcJ_G0017608.1 mouse_genomes_project 10 93233499 93240492 - Plxnc1 protein_coding retained_intron MGP_BALBcJ_T0026887.1 MGP_BALBcJ_G0017608.1 mouse_genomes_project 10 93251106 93267673 - MGP_BALBcJ_P0026887 Plxnc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026888.1 MGP_BALBcJ_G0017608.1 mouse_genomes_project 10 93267454 93320684 - Plxnc1 protein_coding retained_intron MGP_BALBcJ_T0027269.1 MGP_BALBcJ_G0017745.1 mouse_genomes_project 10 125833020 125847620 + MGP_BALBcJ_P0027269 Agap2 protein_coding protein_coding MGP_BALBcJ_T0025509.1 MGP_BALBcJ_G0017270.1 mouse_genomes_project 10 66927540 66930878 - MGP_BALBcJ_P0025509 A930033H14Rik protein_coding protein_coding MGP_BALBcJ_T0026981.1 MGP_BALBcJ_G0017645.1 mouse_genomes_project 10 104335114 104341880 + Ccdc59 protein_coding retained_intron MGP_BALBcJ_T0026982.1 MGP_BALBcJ_G0017645.1 mouse_genomes_project 10 104335114 104341880 + MGP_BALBcJ_P0026982 Ccdc59 protein_coding protein_coding MGP_BALBcJ_T0026983.1 MGP_BALBcJ_G0017645.1 mouse_genomes_project 10 104335551 104337030 + Ccdc59 protein_coding retained_intron MGP_BALBcJ_T0009608.1 MGP_BALBcJ_G0007733.1 mouse_genomes_project 10 121386896 121386997 + Mir8104 miRNA miRNA MGP_BALBcJ_T0099179.1 MGP_BALBcJ_G0037215.1 mouse_genomes_project 10 37294419 37294535 + Gm22105 snRNA snRNA MGP_BALBcJ_T0006127.1 MGP_BALBcJ_G0005119.1 mouse_genomes_project 10 111235292 111293486 + 1700010J16Rik lincRNA lincRNA MGP_BALBcJ_T0006128.1 MGP_BALBcJ_G0005119.1 mouse_genomes_project 10 111235330 111293489 + 1700010J16Rik lincRNA lincRNA MGP_BALBcJ_T0006059.1 MGP_BALBcJ_G0005073.1 mouse_genomes_project 10 21518341 21524702 + Gm15137 lincRNA lincRNA MGP_BALBcJ_T0003012.1 MGP_BALBcJ_G0002817.1 mouse_genomes_project 10 40783871 40785287 + Gm29245 antisense antisense MGP_BALBcJ_T0009564.1 MGP_BALBcJ_G0007689.1 mouse_genomes_project 10 59380359 59380444 + Mir5108 miRNA miRNA MGP_BALBcJ_T0009568.1 MGP_BALBcJ_G0007693.1 mouse_genomes_project 10 73999032 73999116 - Mir678 miRNA miRNA MGP_BALBcJ_T0006064.1 MGP_BALBcJ_G0005078.1 mouse_genomes_project 10 37464097 37476610 + 4930547M16Rik lincRNA lincRNA MGP_BALBcJ_T0100440.1 MGP_BALBcJ_G0038476.1 mouse_genomes_project 10 46151958 46152087 + Gm23584 snoRNA snoRNA MGP_BALBcJ_T0027363.1 MGP_BALBcJ_G0017773.1 mouse_genomes_project 10 126520890 126525343 - MGP_BALBcJ_P0027363 Gpr182 protein_coding protein_coding MGP_BALBcJ_T0026884.1 MGP_BALBcJ_G0017607.1 mouse_genomes_project 10 93084411 93186334 + MGP_BALBcJ_P0026884 Cep83 protein_coding protein_coding MGP_BALBcJ_T0026927.1 MGP_BALBcJ_G0017630.1 mouse_genomes_project 10 97900536 97903814 + MGP_BALBcJ_P0026927 Gad1-ps protein_coding protein_coding MGP_BALBcJ_T0009614.1 MGP_BALBcJ_G0007739.1 mouse_genomes_project 10 125749919 125750040 + Mir546 miRNA miRNA MGP_BALBcJ_T0026705.1 MGP_BALBcJ_G0017571.1 mouse_genomes_project 10 86862665 86950704 - MGP_BALBcJ_P0026705 Mybpc1 protein_coding protein_coding MGP_BALBcJ_T0026706.1 MGP_BALBcJ_G0017571.1 mouse_genomes_project 10 86862668 86867626 - Mybpc1 protein_coding retained_intron MGP_BALBcJ_T0026707.1 MGP_BALBcJ_G0017571.1 mouse_genomes_project 10 86862725 86950577 - MGP_BALBcJ_P0026707 Mybpc1 protein_coding protein_coding MGP_BALBcJ_T0026708.1 MGP_BALBcJ_G0017571.1 mouse_genomes_project 10 86863773 86881815 - MGP_BALBcJ_P0026708 Mybpc1 protein_coding protein_coding MGP_BALBcJ_T0026709.1 MGP_BALBcJ_G0017571.1 mouse_genomes_project 10 86870629 86881867 - Mybpc1 protein_coding retained_intron MGP_BALBcJ_T0026710.1 MGP_BALBcJ_G0017571.1 mouse_genomes_project 10 86870720 86898583 - MGP_BALBcJ_P0026710 Mybpc1 protein_coding protein_coding MGP_BALBcJ_T0026940.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99043021 99055850 + MGP_BALBcJ_P0026940 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026941.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044860 99070752 + MGP_BALBcJ_P0026941 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026942.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044880 99070837 + MGP_BALBcJ_P0026942 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026943.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044886 99064996 + MGP_BALBcJ_P0026943 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026944.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044891 99070831 + MGP_BALBcJ_P0026944 1700017N19Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026945.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044895 99070831 + MGP_BALBcJ_P0026945 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026946.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044906 99070754 + MGP_BALBcJ_P0026946 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026947.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99044918 99070841 + MGP_BALBcJ_P0026947 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0026948.1 MGP_BALBcJ_G0017636.1 mouse_genomes_project 10 99061633 99070749 + MGP_BALBcJ_P0026948 1700017N19Rik protein_coding protein_coding MGP_BALBcJ_T0025184.1 MGP_BALBcJ_G0017182.1 mouse_genomes_project 10 55751979 55753758 - MGP_BALBcJ_P0025184 Gm4981 protein_coding protein_coding MGP_BALBcJ_T0006138.1 MGP_BALBcJ_G0005126.1 mouse_genomes_project 10 127028633 127030830 - Gm26847 lincRNA lincRNA MGP_BALBcJ_T0002989.1 MGP_BALBcJ_G0002800.1 mouse_genomes_project 10 4731505 4732614 + B430219N15Rik antisense antisense MGP_BALBcJ_T0002990.1 MGP_BALBcJ_G0002800.1 mouse_genomes_project 10 4731592 4732682 + B430219N15Rik antisense antisense MGP_BALBcJ_T0024348.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1294605 1327363 - MGP_BALBcJ_P0024348 Rmnd1 protein_coding protein_coding MGP_BALBcJ_T0024349.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1296400 1302581 - MGP_BALBcJ_P0024349 Rmnd1 protein_coding protein_coding MGP_BALBcJ_T0024350.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1298547 1308462 - Rmnd1 protein_coding retained_intron MGP_BALBcJ_T0024351.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1320972 1327319 - Rmnd1 protein_coding retained_intron MGP_BALBcJ_T0024352.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1322121 1327270 - MGP_BALBcJ_P0024352 Rmnd1 protein_coding protein_coding MGP_BALBcJ_T0024353.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1322323 1327309 - MGP_BALBcJ_P0024353 Rmnd1 protein_coding protein_coding MGP_BALBcJ_T0024354.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1322401 1327309 - MGP_BALBcJ_P0024354 Rmnd1 protein_coding protein_coding MGP_BALBcJ_T0024355.1 MGP_BALBcJ_G0016914.1 mouse_genomes_project 10 1323509 1327276 - Rmnd1 protein_coding retained_intron MGP_BALBcJ_T0024347.1 MGP_BALBcJ_G0016913.1 mouse_genomes_project 10 1259107 1281048 - MGP_BALBcJ_P0024347 protein_coding protein_coding MGP_BALBcJ_T0027537.1 MGP_BALBcJ_G0017848.1 mouse_genomes_project 10 128284386 128292779 + MGP_BALBcJ_P0027537 Olfr784 protein_coding protein_coding MGP_BALBcJ_T0027275.1 MGP_BALBcJ_G0017749.1 mouse_genomes_project 10 125938322 125944152 - MGP_BALBcJ_P0027275 Arhgef25 protein_coding unknown_likely_coding MGP_BALBcJ_T0027276.1 MGP_BALBcJ_G0017749.1 mouse_genomes_project 10 125938325 125945859 - MGP_BALBcJ_P0027276 Arhgef25 protein_coding protein_coding MGP_BALBcJ_T0027277.1 MGP_BALBcJ_G0017749.1 mouse_genomes_project 10 125938325 125945628 - MGP_BALBcJ_P0027277 Arhgef25 protein_coding protein_coding MGP_BALBcJ_T0027217.1 MGP_BALBcJ_G0017728.1 mouse_genomes_project 10 121148422 121153376 + MGP_BALBcJ_P0027217 Avpr1a protein_coding protein_coding MGP_BALBcJ_T0012367.1 MGP_BALBcJ_G0010464.1 mouse_genomes_project 10 19542103 19542733 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025356.1 MGP_BALBcJ_G0017230.1 mouse_genomes_project 10 59745749 59747423 + MGP_BALBcJ_P0025356 Neurog3 protein_coding protein_coding MGP_BALBcJ_T0027333.1 MGP_BALBcJ_G0017765.1 mouse_genomes_project 10 126296684 126306242 - MGP_BALBcJ_P0027333 Nxph4 protein_coding protein_coding MGP_BALBcJ_T0100436.1 MGP_BALBcJ_G0038472.1 mouse_genomes_project 10 37833676 37833889 + Rnu3a snoRNA snoRNA MGP_BALBcJ_T0026350.1 MGP_BALBcJ_G0017479.1 mouse_genomes_project 10 79190822 79200911 + MGP_BALBcJ_P0026350 Eef2 protein_coding protein_coding MGP_BALBcJ_T0026351.1 MGP_BALBcJ_G0017479.1 mouse_genomes_project 10 79190841 79200700 + MGP_BALBcJ_P0026351 Eef2 protein_coding unknown_likely_coding MGP_BALBcJ_T0024889.1 MGP_BALBcJ_G0017085.1 mouse_genomes_project 10 34590970 34596509 - MGP_BALBcJ_P0024889 Marcks protein_coding protein_coding MGP_BALBcJ_T0012383.1 MGP_BALBcJ_G0010480.1 mouse_genomes_project 10 41002184 41002617 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026089.1 MGP_BALBcJ_G0017416.1 mouse_genomes_project 10 77972100 77979643 + MGP_BALBcJ_P0026089 Cnn2 protein_coding protein_coding MGP_BALBcJ_T0026090.1 MGP_BALBcJ_G0017416.1 mouse_genomes_project 10 77972139 77978265 + MGP_BALBcJ_P0026090 Cnn2 protein_coding protein_coding MGP_BALBcJ_T0003040.1 MGP_BALBcJ_G0002841.1 mouse_genomes_project 10 78771781 78774164 - Gm17151 antisense antisense MGP_BALBcJ_T0025868.1 MGP_BALBcJ_G0017344.1 mouse_genomes_project 10 75545150 75545513 + MGP_BALBcJ_P0025868 Gm10100 protein_coding protein_coding MGP_BALBcJ_T0027506.1 MGP_BALBcJ_G0017829.1 mouse_genomes_project 10 127734635 127740278 - MGP_BALBcJ_P0027506 Bloc1s1 protein_coding protein_coding MGP_BALBcJ_T0027509.1 MGP_BALBcJ_G0017829.1 mouse_genomes_project 10 127736667 127740278 - MGP_BALBcJ_P0027509 Bloc1s1 protein_coding protein_coding MGP_BALBcJ_T0027510.1 MGP_BALBcJ_G0017829.1 mouse_genomes_project 10 127736700 127740789 - MGP_BALBcJ_P0027510 Bloc1s1 protein_coding protein_coding MGP_BALBcJ_T0027511.1 MGP_BALBcJ_G0017829.1 mouse_genomes_project 10 127736796 127739780 - Bloc1s1 protein_coding processed_transcript MGP_BALBcJ_T0027512.1 MGP_BALBcJ_G0017829.1 mouse_genomes_project 10 127739269 127740278 - Bloc1s1 protein_coding retained_intron MGP_BALBcJ_T0024564.1 MGP_BALBcJ_G0016959.1 mouse_genomes_project 10 10551218 10580749 - MGP_BALBcJ_P0024564 Pex3 protein_coding protein_coding MGP_BALBcJ_T0024565.1 MGP_BALBcJ_G0016959.1 mouse_genomes_project 10 10552261 10580505 - MGP_BALBcJ_P0024565 Pex3 protein_coding protein_coding MGP_BALBcJ_T0024566.1 MGP_BALBcJ_G0016959.1 mouse_genomes_project 10 10556337 10563332 - Pex3 protein_coding retained_intron MGP_BALBcJ_T0024567.1 MGP_BALBcJ_G0016959.1 mouse_genomes_project 10 10558636 10580471 - Pex3 protein_coding processed_transcript MGP_BALBcJ_T0024568.1 MGP_BALBcJ_G0016959.1 mouse_genomes_project 10 10563097 10580426 - Pex3 protein_coding processed_transcript MGP_BALBcJ_T0009612.1 MGP_BALBcJ_G0007737.1 mouse_genomes_project 10 125458477 125458587 - Mir378d miRNA miRNA MGP_BALBcJ_T0027004.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108157829 108322179 - MGP_BALBcJ_P0027004 Nav3 protein_coding unknown_likely_coding MGP_BALBcJ_T0027005.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108159226 108488948 - MGP_BALBcJ_P0027005 Nav3 protein_coding protein_coding MGP_BALBcJ_T0027006.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108159226 108312370 - MGP_BALBcJ_P0027006 Nav3 protein_coding protein_coding MGP_BALBcJ_T0027007.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108189369 108198846 - Nav3 protein_coding processed_transcript MGP_BALBcJ_T0027008.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108230544 108246024 - MGP_BALBcJ_P0027008 Nav3 protein_coding protein_coding MGP_BALBcJ_T0027009.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108371053 108394716 - Nav3 protein_coding retained_intron MGP_BALBcJ_T0027010.1 MGP_BALBcJ_G0017656.1 mouse_genomes_project 10 108389799 108938746 - Nav3 protein_coding retained_intron MGP_BALBcJ_T0026111.1 MGP_BALBcJ_G0017421.1 mouse_genomes_project 10 78040937 78087796 - MGP_BALBcJ_P0026111 Sbno2 protein_coding unknown_likely_coding MGP_BALBcJ_T0026112.1 MGP_BALBcJ_G0017421.1 mouse_genomes_project 10 78041363 78087863 - MGP_BALBcJ_P0026112 Sbno2 protein_coding protein_coding MGP_BALBcJ_T0099186.1 MGP_BALBcJ_G0037222.1 mouse_genomes_project 10 46356355 46356439 - Gm24256 snRNA snRNA MGP_BALBcJ_T0027473.1 MGP_BALBcJ_G0017812.1 mouse_genomes_project 10 127381669 127403748 - MGP_BALBcJ_P0027473 Erbb3 protein_coding protein_coding MGP_BALBcJ_T0024628.1 MGP_BALBcJ_G0016976.1 mouse_genomes_project 10 15715261 15875146 - MGP_BALBcJ_P0024628 Arfgef3 protein_coding protein_coding MGP_BALBcJ_T0099214.1 MGP_BALBcJ_G0037250.1 mouse_genomes_project 10 103011826 103011983 - Gm22945 snRNA snRNA MGP_BALBcJ_T0025178.1 MGP_BALBcJ_G0017179.1 mouse_genomes_project 10 55605373 55608943 + MGP_BALBcJ_P0025178 Fabp7 protein_coding protein_coding MGP_BALBcJ_T0025179.1 MGP_BALBcJ_G0017179.1 mouse_genomes_project 10 55605415 55607305 + MGP_BALBcJ_P0025179 Fabp7 protein_coding protein_coding MGP_BALBcJ_T0012409.1 MGP_BALBcJ_G0010506.1 mouse_genomes_project 10 85342690 85343099 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025412.1 MGP_BALBcJ_G0017244.1 mouse_genomes_project 10 60439830 60519336 - MGP_BALBcJ_P0025412 Tet1 protein_coding protein_coding MGP_BALBcJ_T0025413.1 MGP_BALBcJ_G0017244.1 mouse_genomes_project 10 60439837 60538649 - MGP_BALBcJ_P0025413 Tet1 protein_coding protein_coding MGP_BALBcJ_T0025414.1 MGP_BALBcJ_G0017244.1 mouse_genomes_project 10 60447882 60449801 - MGP_BALBcJ_P0025414 Tet1 protein_coding protein_coding MGP_BALBcJ_T0025415.1 MGP_BALBcJ_G0017244.1 mouse_genomes_project 10 60448386 60449802 - MGP_BALBcJ_P0025415 Tet1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025416.1 MGP_BALBcJ_G0017244.1 mouse_genomes_project 10 60448608 60449800 - MGP_BALBcJ_P0025416 Tet1 protein_coding protein_coding MGP_BALBcJ_T0025417.1 MGP_BALBcJ_G0017244.1 mouse_genomes_project 10 60477057 60504457 - Tet1 protein_coding processed_transcript MGP_BALBcJ_T0100429.1 MGP_BALBcJ_G0038465.1 mouse_genomes_project 10 26855652 26855780 + Gm24286 snoRNA snoRNA MGP_BALBcJ_T0009602.1 MGP_BALBcJ_G0007727.1 mouse_genomes_project 10 106897928 106898022 + Gm25591 miRNA miRNA MGP_BALBcJ_T0006130.1 MGP_BALBcJ_G0005121.1 mouse_genomes_project 10 115314324 115320426 - 1700030O20Rik lincRNA lincRNA MGP_BALBcJ_T0024819.1 MGP_BALBcJ_G0017051.1 mouse_genomes_project 10 26667132 26686125 + MGP_BALBcJ_P0024819 9330159F19Rik protein_coding protein_coding MGP_BALBcJ_T0025972.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77516390 77531683 - MGP_BALBcJ_P0025972 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025973.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77516390 77531791 - MGP_BALBcJ_P0025973 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025974.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77516391 77518106 - MGP_BALBcJ_P0025974 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025975.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77517066 77518311 - Mier2 protein_coding retained_intron MGP_BALBcJ_T0025976.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77517813 77520916 - Mier2 protein_coding retained_intron MGP_BALBcJ_T0025977.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77518612 77520498 - Mier2 protein_coding processed_transcript MGP_BALBcJ_T0025978.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77524909 77531706 - MGP_BALBcJ_P0025978 Mier2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025979.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77524981 77531476 - MGP_BALBcJ_P0025979 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025980.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77524988 77531713 - MGP_BALBcJ_P0025980 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025981.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77525013 77526917 - MGP_BALBcJ_P0025981 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025982.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77525665 77531669 - MGP_BALBcJ_P0025982 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025983.1 MGP_BALBcJ_G0017385.1 mouse_genomes_project 10 77525743 77531197 - MGP_BALBcJ_P0025983 Mier2 protein_coding protein_coding MGP_BALBcJ_T0025358.1 MGP_BALBcJ_G0017231.1 mouse_genomes_project 10 59797796 59846306 - MGP_BALBcJ_P0025358 Tspan15 protein_coding protein_coding MGP_BALBcJ_T0024838.1 MGP_BALBcJ_G0017059.1 mouse_genomes_project 10 28282259 28292695 - MGP_BALBcJ_P0024838 Hey2 protein_coding protein_coding MGP_BALBcJ_T0025837.1 MGP_BALBcJ_G0017335.1 mouse_genomes_project 10 75345522 75381065 + MGP_BALBcJ_P0025837 Itgb2 protein_coding protein_coding MGP_BALBcJ_T0025838.1 MGP_BALBcJ_G0017335.1 mouse_genomes_project 10 75345617 75362634 + MGP_BALBcJ_P0025838 Itgb2 protein_coding protein_coding MGP_BALBcJ_T0025839.1 MGP_BALBcJ_G0017335.1 mouse_genomes_project 10 75345640 75364111 + MGP_BALBcJ_P0025839 Itgb2 protein_coding protein_coding MGP_BALBcJ_T0025840.1 MGP_BALBcJ_G0017335.1 mouse_genomes_project 10 75345644 75381001 + MGP_BALBcJ_P0025840 Itgb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025841.1 MGP_BALBcJ_G0017335.1 mouse_genomes_project 10 75345650 75381087 + MGP_BALBcJ_P0025841 Itgb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027033.1 MGP_BALBcJ_G0017665.1 mouse_genomes_project 10 110485336 110497186 - MGP_BALBcJ_P0027033 Glipr1 protein_coding protein_coding MGP_BALBcJ_T0027034.1 MGP_BALBcJ_G0017665.1 mouse_genomes_project 10 110485343 110502282 - MGP_BALBcJ_P0027034 Glipr1 protein_coding protein_coding MGP_BALBcJ_T0027035.1 MGP_BALBcJ_G0017665.1 mouse_genomes_project 10 110485348 110493424 - MGP_BALBcJ_P0027035 Glipr1 protein_coding protein_coding MGP_BALBcJ_T0027036.1 MGP_BALBcJ_G0017665.1 mouse_genomes_project 10 110493396 110502292 - Glipr1 protein_coding processed_transcript MGP_BALBcJ_T0027037.1 MGP_BALBcJ_G0017665.1 mouse_genomes_project 10 110493496 110495751 - Glipr1 protein_coding processed_transcript MGP_BALBcJ_T0100463.1 MGP_BALBcJ_G0038499.1 mouse_genomes_project 10 105604203 105604288 + Gm24745 snoRNA snoRNA MGP_BALBcJ_T0027095.1 MGP_BALBcJ_G0017686.1 mouse_genomes_project 10 115367530 115488330 - MGP_BALBcJ_P0027095 Myrfl protein_coding protein_coding MGP_BALBcJ_T0024362.1 MGP_BALBcJ_G0016916.1 mouse_genomes_project 10 1373500 1456356 + MGP_BALBcJ_P0024362 Ccdc170 protein_coding protein_coding MGP_BALBcJ_T0024363.1 MGP_BALBcJ_G0016916.1 mouse_genomes_project 10 1402574 1456356 + MGP_BALBcJ_P0024363 Ccdc170 protein_coding protein_coding MGP_BALBcJ_T0024364.1 MGP_BALBcJ_G0016916.1 mouse_genomes_project 10 1404235 1407455 + MGP_BALBcJ_P0024364 Ccdc170 protein_coding protein_coding MGP_BALBcJ_T0024365.1 MGP_BALBcJ_G0016916.1 mouse_genomes_project 10 1427900 1436633 + Ccdc170 protein_coding processed_transcript MGP_BALBcJ_T0026598.1 MGP_BALBcJ_G0017543.1 mouse_genomes_project 10 83543636 83544487 + MGP_BALBcJ_P0026598 Gm8394 protein_coding protein_coding MGP_BALBcJ_T0100459.1 MGP_BALBcJ_G0038495.1 mouse_genomes_project 10 99995645 99995777 + Gm26278 snoRNA snoRNA MGP_BALBcJ_T0024454.1 MGP_BALBcJ_G0016933.1 mouse_genomes_project 10 4632236 4667701 + MGP_BALBcJ_P0024454 Lats1 protein_coding protein_coding MGP_BALBcJ_T0024455.1 MGP_BALBcJ_G0016933.1 mouse_genomes_project 10 4642271 4664831 + MGP_BALBcJ_P0024455 Lats1 protein_coding protein_coding MGP_BALBcJ_T0027488.1 MGP_BALBcJ_G0017819.1 mouse_genomes_project 10 127537231 127554599 - MGP_BALBcJ_P0027488 Dgka protein_coding unknown_likely_coding MGP_BALBcJ_T0025749.1 MGP_BALBcJ_G0017310.1 mouse_genomes_project 10 73724276 73730607 + MGP_BALBcJ_P0025749 Vpreb3 protein_coding protein_coding MGP_BALBcJ_T0025750.1 MGP_BALBcJ_G0017310.1 mouse_genomes_project 10 73729269 73730627 + MGP_BALBcJ_P0025750 Vpreb3 protein_coding protein_coding MGP_BALBcJ_T0024770.1 MGP_BALBcJ_G0017036.1 mouse_genomes_project 10 22335025 22348993 - MGP_BALBcJ_P0024770 Arg1 protein_coding protein_coding MGP_BALBcJ_T0009546.1 MGP_BALBcJ_G0007671.1 mouse_genomes_project 10 17421572 17421680 - Mir6413 miRNA miRNA MGP_BALBcJ_T0027583.1 MGP_BALBcJ_G0017882.1 mouse_genomes_project 10 129014204 129015146 + MGP_BALBcJ_P0027583 Olfr822 protein_coding protein_coding MGP_BALBcJ_T0027307.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126148470 126215539 + MGP_BALBcJ_P0027307 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027308.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126160314 126270305 + MGP_BALBcJ_P0027308 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027309.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126191322 126222861 + MGP_BALBcJ_P0027309 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027310.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126191851 126270271 + MGP_BALBcJ_P0027310 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027311.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126192108 126269953 + MGP_BALBcJ_P0027311 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027312.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126192216 126223614 + MGP_BALBcJ_P0027312 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027313.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126207551 126269631 + MGP_BALBcJ_P0027313 R3hdm2 protein_coding unknown_likely_coding MGP_BALBcJ_T0027314.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126215458 126269631 + MGP_BALBcJ_P0027314 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027315.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126215458 126270306 + MGP_BALBcJ_P0027315 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027316.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126215458 126270289 + MGP_BALBcJ_P0027316 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027317.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126215458 126269631 + MGP_BALBcJ_P0027317 R3hdm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027318.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126230481 126236199 + MGP_BALBcJ_P0027318 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027319.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126230507 126236329 + R3hdm2 protein_coding retained_intron MGP_BALBcJ_T0027320.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126230511 126270305 + MGP_BALBcJ_P0027320 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027321.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126230551 126254795 + R3hdm2 protein_coding processed_transcript MGP_BALBcJ_T0027322.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126251958 126255186 + R3hdm2 protein_coding retained_intron MGP_BALBcJ_T0027323.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126255932 126263706 + R3hdm2 protein_coding retained_intron MGP_BALBcJ_T0027324.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126256123 126266067 + MGP_BALBcJ_P0027324 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027325.1 MGP_BALBcJ_G0017761.1 mouse_genomes_project 10 126263638 126270289 + MGP_BALBcJ_P0027325 R3hdm2 protein_coding protein_coding MGP_BALBcJ_T0027411.1 MGP_BALBcJ_G0017791.1 mouse_genomes_project 10 127022882 127029858 + MGP_BALBcJ_P0027411 Mip protein_coding protein_coding MGP_BALBcJ_T0026548.1 MGP_BALBcJ_G0017525.1 mouse_genomes_project 10 81162154 81162811 + MGP_BALBcJ_P0026548 Gm4799 protein_coding protein_coding MGP_BALBcJ_T0017096.1 MGP_BALBcJ_G0015081.1 mouse_genomes_project 10 126046854 126047883 - Gm4189 processed_transcript retained_intron MGP_BALBcJ_T0017097.1 MGP_BALBcJ_G0015081.1 mouse_genomes_project 10 126046854 126047947 - Gm4189 processed_transcript processed_transcript MGP_BALBcJ_T0009606.1 MGP_BALBcJ_G0007731.1 mouse_genomes_project 10 120337766 120337842 - Gm24330 miRNA miRNA MGP_BALBcJ_T0025497.1 MGP_BALBcJ_G0017265.1 mouse_genomes_project 10 65703265 65768667 + MGP_BALBcJ_P0025497 Rtkn2 protein_coding protein_coding MGP_BALBcJ_T0025498.1 MGP_BALBcJ_G0017265.1 mouse_genomes_project 10 65703293 65768663 + MGP_BALBcJ_P0025498 Rtkn2 protein_coding protein_coding MGP_BALBcJ_T0025499.1 MGP_BALBcJ_G0017265.1 mouse_genomes_project 10 65703300 65785583 + MGP_BALBcJ_P0025499 Rtkn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025500.1 MGP_BALBcJ_G0017265.1 mouse_genomes_project 10 65703393 65785586 + MGP_BALBcJ_P0025500 Rtkn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025501.1 MGP_BALBcJ_G0017265.1 mouse_genomes_project 10 65703410 65767098 + MGP_BALBcJ_P0025501 Rtkn2 protein_coding protein_coding MGP_BALBcJ_T0025502.1 MGP_BALBcJ_G0017265.1 mouse_genomes_project 10 65768766 65776874 + Rtkn2 protein_coding processed_transcript MGP_BALBcJ_T0024866.1 MGP_BALBcJ_G0017074.1 mouse_genomes_project 10 31467972 31473502 - MGP_BALBcJ_P0024866 Fam26d protein_coding protein_coding MGP_BALBcJ_T0025992.1 MGP_BALBcJ_G0017389.1 mouse_genomes_project 10 77618016 77624452 - MGP_BALBcJ_P0025992 Odf3l2 protein_coding protein_coding MGP_BALBcJ_T0026286.1 MGP_BALBcJ_G0017460.1 mouse_genomes_project 10 78810717 78813143 + MGP_BALBcJ_P0026286 Amh protein_coding protein_coding MGP_BALBcJ_T0024683.1 MGP_BALBcJ_G0016994.1 mouse_genomes_project 10 18254272 18290836 - MGP_BALBcJ_P0024683 Myb protein_coding protein_coding MGP_BALBcJ_T0024684.1 MGP_BALBcJ_G0016994.1 mouse_genomes_project 10 18254613 18290836 - MGP_BALBcJ_P0024684 Myb protein_coding protein_coding MGP_BALBcJ_T0024685.1 MGP_BALBcJ_G0016994.1 mouse_genomes_project 10 18269071 18290781 - Myb protein_coding retained_intron MGP_BALBcJ_T0024631.1 MGP_BALBcJ_G0016979.1 mouse_genomes_project 10 16131648 16146140 - MGP_BALBcJ_P0024631 Tnfaip3 protein_coding protein_coding MGP_BALBcJ_T0024632.1 MGP_BALBcJ_G0016979.1 mouse_genomes_project 10 16131651 16142701 - MGP_BALBcJ_P0024632 Tnfaip3 protein_coding protein_coding MGP_BALBcJ_T0024633.1 MGP_BALBcJ_G0016979.1 mouse_genomes_project 10 16131667 16146106 - Tnfaip3 protein_coding retained_intron MGP_BALBcJ_T0024634.1 MGP_BALBcJ_G0016979.1 mouse_genomes_project 10 16138005 16139580 - Tnfaip3 protein_coding retained_intron MGP_BALBcJ_T0024635.1 MGP_BALBcJ_G0016979.1 mouse_genomes_project 10 16139000 16146387 - MGP_BALBcJ_P0024635 Tnfaip3 protein_coding protein_coding MGP_BALBcJ_T0024636.1 MGP_BALBcJ_G0016979.1 mouse_genomes_project 10 16142253 16145312 - MGP_BALBcJ_P0024636 Tnfaip3 protein_coding protein_coding MGP_BALBcJ_T0012376.1 MGP_BALBcJ_G0010473.1 mouse_genomes_project 10 29013139 29013753 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026302.1 MGP_BALBcJ_G0017468.1 mouse_genomes_project 10 78909866 78927345 - MGP_BALBcJ_P0026302 Lmnb2 protein_coding protein_coding MGP_BALBcJ_T0026303.1 MGP_BALBcJ_G0017468.1 mouse_genomes_project 10 78910021 78927318 - MGP_BALBcJ_P0026303 Lmnb2 protein_coding protein_coding MGP_BALBcJ_T0026304.1 MGP_BALBcJ_G0017468.1 mouse_genomes_project 10 78911461 78915076 - MGP_BALBcJ_P0026304 Lmnb2 protein_coding protein_coding MGP_BALBcJ_T0026305.1 MGP_BALBcJ_G0017468.1 mouse_genomes_project 10 78918387 78926951 - Lmnb2 protein_coding processed_transcript MGP_BALBcJ_T0024958.1 MGP_BALBcJ_G0017109.1 mouse_genomes_project 10 38791056 38904689 - MGP_BALBcJ_P0024958 Fig4 protein_coding protein_coding MGP_BALBcJ_T0024659.1 MGP_BALBcJ_G0016988.1 mouse_genomes_project 10 17269181 17402780 + MGP_BALBcJ_P0024659 Map7 protein_coding protein_coding MGP_BALBcJ_T0024660.1 MGP_BALBcJ_G0016988.1 mouse_genomes_project 10 17269630 17405670 + MGP_BALBcJ_P0024660 Map7 protein_coding protein_coding MGP_BALBcJ_T0024661.1 MGP_BALBcJ_G0016988.1 mouse_genomes_project 10 17291883 17381395 + MGP_BALBcJ_P0024661 Map7 protein_coding unknown_likely_coding MGP_BALBcJ_T0098709.1 MGP_BALBcJ_G0036763.1 mouse_genomes_project 10 26379822 26379976 - Gm22811 ribozyme ribozyme MGP_BALBcJ_T0025448.1 MGP_BALBcJ_G0017250.1 mouse_genomes_project 10 60770943 60771393 + MGP_BALBcJ_P0025448 Atoh7 protein_coding protein_coding MGP_BALBcJ_T0027198.1 MGP_BALBcJ_G0017724.1 mouse_genomes_project 10 120361590 120404852 + MGP_BALBcJ_P0027198 D930020B18Rik protein_coding protein_coding MGP_BALBcJ_T0027199.1 MGP_BALBcJ_G0017724.1 mouse_genomes_project 10 120361703 120421258 + MGP_BALBcJ_P0027199 D930020B18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027200.1 MGP_BALBcJ_G0017724.1 mouse_genomes_project 10 120361796 120420987 + MGP_BALBcJ_P0027200 D930020B18Rik protein_coding protein_coding MGP_BALBcJ_T0027201.1 MGP_BALBcJ_G0017724.1 mouse_genomes_project 10 120361874 120420987 + MGP_BALBcJ_P0027201 D930020B18Rik protein_coding protein_coding MGP_BALBcJ_T0025194.1 MGP_BALBcJ_G0017184.1 mouse_genomes_project 10 55840408 55951412 + MGP_BALBcJ_P0025194 Lims1 protein_coding protein_coding MGP_BALBcJ_T0025195.1 MGP_BALBcJ_G0017184.1 mouse_genomes_project 10 55913013 55948504 + MGP_BALBcJ_P0025195 Lims1 protein_coding protein_coding MGP_BALBcJ_T0025196.1 MGP_BALBcJ_G0017184.1 mouse_genomes_project 10 55913028 55948299 + MGP_BALBcJ_P0025196 Lims1 protein_coding protein_coding MGP_BALBcJ_T0025197.1 MGP_BALBcJ_G0017184.1 mouse_genomes_project 10 55934795 55937075 + Lims1 protein_coding processed_transcript MGP_BALBcJ_T0025198.1 MGP_BALBcJ_G0017184.1 mouse_genomes_project 10 55943373 55948385 + Lims1 protein_coding processed_transcript MGP_BALBcJ_T0027546.1 MGP_BALBcJ_G0017856.1 mouse_genomes_project 10 128431634 128432573 + MGP_BALBcJ_P0027546 Olfr791 protein_coding protein_coding MGP_BALBcJ_T0026660.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86203115 86275679 + MGP_BALBcJ_P0026660 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026661.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86203915 86281833 + MGP_BALBcJ_P0026661 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026662.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86204105 86276585 + MGP_BALBcJ_P0026662 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026663.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86204337 86275677 + MGP_BALBcJ_P0026663 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026664.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86204458 86260160 + MGP_BALBcJ_P0026664 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026665.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86204877 86260705 + MGP_BALBcJ_P0026665 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026666.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86205453 86275683 + MGP_BALBcJ_P0026666 Igf1 protein_coding protein_coding MGP_BALBcJ_T0026667.1 MGP_BALBcJ_G0017562.1 mouse_genomes_project 10 86206176 86275661 + MGP_BALBcJ_P0026667 Igf1 protein_coding protein_coding MGP_BALBcJ_T0009551.1 MGP_BALBcJ_G0007676.1 mouse_genomes_project 10 25657138 25657221 - Gm22370 miRNA miRNA MGP_BALBcJ_T0009560.1 MGP_BALBcJ_G0007685.1 mouse_genomes_project 10 57771023 57771090 - Gm22117 miRNA miRNA MGP_BALBcJ_T0025785.1 MGP_BALBcJ_G0017323.1 mouse_genomes_project 10 74358983 74367455 + MGP_BALBcJ_P0025785 Spatc1l protein_coding protein_coding MGP_BALBcJ_T0025786.1 MGP_BALBcJ_G0017323.1 mouse_genomes_project 10 74359020 74367284 + MGP_BALBcJ_P0025786 Spatc1l protein_coding protein_coding MGP_BALBcJ_T0026586.1 MGP_BALBcJ_G0017536.1 mouse_genomes_project 10 82845958 82949711 + MGP_BALBcJ_P0026586 Polr3b protein_coding protein_coding MGP_BALBcJ_T0025923.1 MGP_BALBcJ_G0017358.1 mouse_genomes_project 10 76038971 76053215 - MGP_BALBcJ_P0025923 Pwp2 protein_coding protein_coding MGP_BALBcJ_T0026876.1 MGP_BALBcJ_G0017605.1 mouse_genomes_project 10 92688012 92693029 - MGP_BALBcJ_P0026876 protein_coding protein_coding MGP_BALBcJ_T0026877.1 MGP_BALBcJ_G0017605.1 mouse_genomes_project 10 92691347 92692933 - protein_coding retained_intron MGP_BALBcJ_T0027143.1 MGP_BALBcJ_G0017708.1 mouse_genomes_project 10 117833395 117873897 - MGP_BALBcJ_P0027143 Cand1 protein_coding protein_coding MGP_BALBcJ_T0027144.1 MGP_BALBcJ_G0017708.1 mouse_genomes_project 10 117840477 117842364 - Cand1 protein_coding retained_intron MGP_BALBcJ_T0027145.1 MGP_BALBcJ_G0017708.1 mouse_genomes_project 10 117845934 117846765 - Cand1 protein_coding retained_intron MGP_BALBcJ_T0027146.1 MGP_BALBcJ_G0017708.1 mouse_genomes_project 10 117850634 117873145 - MGP_BALBcJ_P0027146 Cand1 protein_coding protein_coding MGP_BALBcJ_T0024423.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3791056 3880813 - MGP_BALBcJ_P0024423 Ipcef1 protein_coding protein_coding MGP_BALBcJ_T0024424.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3791092 3903919 - MGP_BALBcJ_P0024424 Ipcef1 protein_coding protein_coding MGP_BALBcJ_T0024425.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3812198 3957242 - MGP_BALBcJ_P0024425 Ipcef1 protein_coding protein_coding MGP_BALBcJ_T0024426.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3812198 3922231 - MGP_BALBcJ_P0024426 Ipcef1 protein_coding protein_coding MGP_BALBcJ_T0024427.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3818196 3881421 - Ipcef1 protein_coding processed_transcript MGP_BALBcJ_T0024428.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3818196 3881572 - Ipcef1 protein_coding processed_transcript MGP_BALBcJ_T0024429.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3820475 3922213 - MGP_BALBcJ_P0024429 Ipcef1 protein_coding protein_coding MGP_BALBcJ_T0024430.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3820555 3881641 - Ipcef1 protein_coding processed_transcript MGP_BALBcJ_T0024431.1 MGP_BALBcJ_G0016927.1 mouse_genomes_project 10 3858695 3901000 - MGP_BALBcJ_P0024431 Ipcef1 protein_coding protein_coding MGP_BALBcJ_T0027547.1 MGP_BALBcJ_G0017857.1 mouse_genomes_project 10 128475887 128479845 + MGP_BALBcJ_P0027547 Olfr794 protein_coding protein_coding MGP_BALBcJ_T0027548.1 MGP_BALBcJ_G0017857.1 mouse_genomes_project 10 128478882 128479845 + MGP_BALBcJ_P0027548 Olfr794 protein_coding protein_coding MGP_BALBcJ_T0026260.1 MGP_BALBcJ_G0017451.1 mouse_genomes_project 10 78626022 78644024 + MGP_BALBcJ_P0026260 Csnk1g2 protein_coding protein_coding MGP_BALBcJ_T0026261.1 MGP_BALBcJ_G0017451.1 mouse_genomes_project 10 78632898 78644024 + MGP_BALBcJ_P0026261 Csnk1g2 protein_coding protein_coding MGP_BALBcJ_T0027452.1 MGP_BALBcJ_G0017805.1 mouse_genomes_project 10 127270649 127302308 + MGP_BALBcJ_P0027452 Smarcc2 protein_coding protein_coding MGP_BALBcJ_T0027453.1 MGP_BALBcJ_G0017805.1 mouse_genomes_project 10 127270649 127302308 + MGP_BALBcJ_P0027453 Smarcc2 protein_coding protein_coding MGP_BALBcJ_T0027454.1 MGP_BALBcJ_G0017805.1 mouse_genomes_project 10 127270649 127302308 + MGP_BALBcJ_P0027454 Smarcc2 protein_coding protein_coding MGP_BALBcJ_T0025241.1 MGP_BALBcJ_G0017200.1 mouse_genomes_project 10 57503181 57505277 - MGP_BALBcJ_P0025241 Ddit4 protein_coding protein_coding MGP_BALBcJ_T0006069.1 MGP_BALBcJ_G0005083.1 mouse_genomes_project 10 58504543 58514493 - Pldi lincRNA lincRNA MGP_BALBcJ_T0024507.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8144863 8183656 + MGP_BALBcJ_P0024507 Shprh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024508.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8144866 8213088 + MGP_BALBcJ_P0024508 Shprh protein_coding protein_coding MGP_BALBcJ_T0024509.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8144909 8149963 + Shprh protein_coding retained_intron MGP_BALBcJ_T0024510.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8144960 8205045 + MGP_BALBcJ_P0024510 Shprh protein_coding protein_coding MGP_BALBcJ_T0024511.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8144960 8205045 + MGP_BALBcJ_P0024511 Shprh protein_coding protein_coding MGP_BALBcJ_T0024512.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8159759 8165478 + MGP_BALBcJ_P0024512 Shprh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024513.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8161871 8209790 + Shprh protein_coding retained_intron MGP_BALBcJ_T0024514.1 MGP_BALBcJ_G0016948.1 mouse_genomes_project 10 8200549 8205104 + Shprh protein_coding retained_intron MGP_BALBcJ_T0025859.1 MGP_BALBcJ_G0017338.1 mouse_genomes_project 10 75438988 75464074 + MGP_BALBcJ_P0025859 Ube2g2 protein_coding protein_coding MGP_BALBcJ_T0025860.1 MGP_BALBcJ_G0017338.1 mouse_genomes_project 10 75438992 75462635 + MGP_BALBcJ_P0025860 Ube2g2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025861.1 MGP_BALBcJ_G0017338.1 mouse_genomes_project 10 75439047 75459576 + MGP_BALBcJ_P0025861 Ube2g2 protein_coding protein_coding MGP_BALBcJ_T0025862.1 MGP_BALBcJ_G0017338.1 mouse_genomes_project 10 75459261 75462584 + Ube2g2 protein_coding retained_intron MGP_BALBcJ_T0026835.1 MGP_BALBcJ_G0017596.1 mouse_genomes_project 10 91968574 91975829 - MGP_BALBcJ_P0026835 Snrpf protein_coding protein_coding MGP_BALBcJ_T0006049.1 MGP_BALBcJ_G0005066.1 mouse_genomes_project 10 10993623 11035451 - Gm26835 lincRNA lincRNA MGP_BALBcJ_T0025114.1 MGP_BALBcJ_G0017154.1 mouse_genomes_project 10 49358859 49375484 - MGP_BALBcJ_P0025114 Gprc6a protein_coding protein_coding MGP_BALBcJ_T0025942.1 MGP_BALBcJ_G0017367.1 mouse_genomes_project 10 76495288 76501605 - MGP_BALBcJ_P0025942 Olfr1357 protein_coding protein_coding MGP_BALBcJ_T0025943.1 MGP_BALBcJ_G0017367.1 mouse_genomes_project 10 76495288 76496300 - MGP_BALBcJ_P0025943 Olfr1357 protein_coding protein_coding MGP_BALBcJ_T0025944.1 MGP_BALBcJ_G0017367.1 mouse_genomes_project 10 76495552 76501605 - MGP_BALBcJ_P0025944 Olfr1357 protein_coding protein_coding MGP_BALBcJ_T0025452.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60980493 61044703 - MGP_BALBcJ_P0025452 Sirt1 protein_coding protein_coding MGP_BALBcJ_T0025453.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60980495 61000787 - MGP_BALBcJ_P0025453 Sirt1 protein_coding protein_coding MGP_BALBcJ_T0025454.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60980495 61000787 - MGP_BALBcJ_P0025454 Sirt1 protein_coding protein_coding MGP_BALBcJ_T0025455.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60980495 60998747 - MGP_BALBcJ_P0025455 Sirt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025456.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60980546 61000790 - MGP_BALBcJ_P0025456 Sirt1 protein_coding protein_coding MGP_BALBcJ_T0025457.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60983635 60987115 - Sirt1 protein_coding retained_intron MGP_BALBcJ_T0025458.1 MGP_BALBcJ_G0017253.1 mouse_genomes_project 10 60992878 60998747 - Sirt1 protein_coding retained_intron MGP_BALBcJ_T0024481.1 MGP_BALBcJ_G0016942.1 mouse_genomes_project 10 6589826 6638775 - MGP_BALBcJ_P0024481 Samd5 protein_coding protein_coding MGP_BALBcJ_T0024450.1 MGP_BALBcJ_G0016932.1 mouse_genomes_project 10 4617312 4629909 + MGP_BALBcJ_P0024450 Nup43 protein_coding protein_coding MGP_BALBcJ_T0024451.1 MGP_BALBcJ_G0016932.1 mouse_genomes_project 10 4617323 4618101 + Nup43 protein_coding retained_intron MGP_BALBcJ_T0024452.1 MGP_BALBcJ_G0016932.1 mouse_genomes_project 10 4617349 4627108 + Nup43 protein_coding retained_intron MGP_BALBcJ_T0024453.1 MGP_BALBcJ_G0016932.1 mouse_genomes_project 10 4621046 4626282 + Nup43 protein_coding retained_intron MGP_BALBcJ_T0026242.1 MGP_BALBcJ_G0017445.1 mouse_genomes_project 10 78520982 78541959 - MGP_BALBcJ_P0026242 Atp8b3 protein_coding protein_coding MGP_BALBcJ_T0026962.1 MGP_BALBcJ_G0017639.1 mouse_genomes_project 10 101004416 101039121 + MGP_BALBcJ_P0026962 Rassf9 protein_coding protein_coding MGP_BALBcJ_T0027369.1 MGP_BALBcJ_G0017778.1 mouse_genomes_project 10 126631233 126644701 + MGP_BALBcJ_P0027369 Rdh19 protein_coding protein_coding MGP_BALBcJ_T0100433.1 MGP_BALBcJ_G0038469.1 mouse_genomes_project 10 35679343 35679411 + Gm24297 snoRNA snoRNA MGP_BALBcJ_T0025028.1 MGP_BALBcJ_G0017124.1 mouse_genomes_project 10 40120953 40154298 + MGP_BALBcJ_P0025028 Snx3 protein_coding protein_coding MGP_BALBcJ_T0025029.1 MGP_BALBcJ_G0017124.1 mouse_genomes_project 10 40120954 40154881 + MGP_BALBcJ_P0025029 Snx3 protein_coding protein_coding MGP_BALBcJ_T0025030.1 MGP_BALBcJ_G0017124.1 mouse_genomes_project 10 40121213 40154892 + MGP_BALBcJ_P0025030 Snx3 protein_coding protein_coding MGP_BALBcJ_T0025956.1 MGP_BALBcJ_G0017375.1 mouse_genomes_project 10 76831632 76838936 + MGP_BALBcJ_P0025956 Olfr1353 protein_coding protein_coding MGP_BALBcJ_T0025957.1 MGP_BALBcJ_G0017375.1 mouse_genomes_project 10 76831646 76838258 + MGP_BALBcJ_P0025957 Olfr1353 protein_coding protein_coding MGP_BALBcJ_T0025958.1 MGP_BALBcJ_G0017375.1 mouse_genomes_project 10 76837921 76838936 + MGP_BALBcJ_P0025958 Olfr1353 protein_coding protein_coding MGP_BALBcJ_T0027011.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109215934 109218978 + E2f7 protein_coding processed_transcript MGP_BALBcJ_T0027012.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109215960 109227378 + MGP_BALBcJ_P0027012 E2f7 protein_coding protein_coding MGP_BALBcJ_T0027013.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109215963 109240692 + E2f7 protein_coding retained_intron MGP_BALBcJ_T0027014.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109215963 109262482 + MGP_BALBcJ_P0027014 E2f7 protein_coding protein_coding MGP_BALBcJ_T0027015.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109216008 109260608 + MGP_BALBcJ_P0027015 E2f7 protein_coding protein_coding MGP_BALBcJ_T0027016.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109216067 109225318 + MGP_BALBcJ_P0027016 E2f7 protein_coding protein_coding MGP_BALBcJ_T0027017.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109225002 109226988 + E2f7 protein_coding processed_transcript MGP_BALBcJ_T0027018.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109225072 109247196 + MGP_BALBcJ_P0027018 E2f7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027019.1 MGP_BALBcJ_G0017657.1 mouse_genomes_project 10 109236408 109238307 + E2f7 protein_coding retained_intron MGP_BALBcJ_T0012396.1 MGP_BALBcJ_G0010493.1 mouse_genomes_project 10 60589927 60590553 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024973.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39078948 39083637 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024976.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39080478 39083428 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024977.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39080478 39083647 - MGP_BALBcJ_P0024977 Smpd2 protein_coding protein_coding MGP_BALBcJ_T0024978.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39080484 39083637 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024979.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39080855 39081552 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024980.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39080945 39083404 - MGP_BALBcJ_P0024980 Smpd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024981.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39081337 39082986 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024982.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39081665 39083645 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024983.1 MGP_BALBcJ_G0017113.1 mouse_genomes_project 10 39082323 39083676 - Smpd2 protein_coding retained_intron MGP_BALBcJ_T0024950.1 MGP_BALBcJ_G0017103.1 mouse_genomes_project 10 38166417 38200252 + MGP_BALBcJ_P0024950 Slc22a16 protein_coding protein_coding MGP_BALBcJ_T0024951.1 MGP_BALBcJ_G0017103.1 mouse_genomes_project 10 38166694 38200248 + MGP_BALBcJ_P0024951 Slc22a16 protein_coding protein_coding MGP_BALBcJ_T0006071.1 MGP_BALBcJ_G0005085.1 mouse_genomes_project 10 58623101 58629220 - Gm20610 lincRNA lincRNA MGP_BALBcJ_T0026026.1 MGP_BALBcJ_G0017401.1 mouse_genomes_project 10 77773527 77801410 + MGP_BALBcJ_P0026026 Palm protein_coding protein_coding MGP_BALBcJ_T0026027.1 MGP_BALBcJ_G0017401.1 mouse_genomes_project 10 77773527 77801410 + MGP_BALBcJ_P0026027 Palm protein_coding protein_coding MGP_BALBcJ_T0026003.1 MGP_BALBcJ_G0017395.1 mouse_genomes_project 10 77696053 77715493 + MGP_BALBcJ_P0026003 Hcn2 protein_coding protein_coding MGP_BALBcJ_T0027541.1 MGP_BALBcJ_G0017851.1 mouse_genomes_project 10 128363075 128364383 + MGP_BALBcJ_P0027541 protein_coding protein_coding MGP_BALBcJ_T0025073.1 MGP_BALBcJ_G0017137.1 mouse_genomes_project 10 41541794 41587803 + MGP_BALBcJ_P0025073 Rtn4ip1 protein_coding protein_coding MGP_BALBcJ_T0025074.1 MGP_BALBcJ_G0017137.1 mouse_genomes_project 10 41542376 41587812 + MGP_BALBcJ_P0025074 Rtn4ip1 protein_coding protein_coding MGP_BALBcJ_T0024391.1 MGP_BALBcJ_G0016925.1 mouse_genomes_project 10 3644451 3667408 - MGP_BALBcJ_P0024391 Gm10945 protein_coding protein_coding MGP_BALBcJ_T0017054.1 MGP_BALBcJ_G0015066.1 mouse_genomes_project 10 1303704 1318242 + Gm16153 processed_transcript processed_transcript MGP_BALBcJ_T0025777.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74328310 74332291 + Lss protein_coding processed_transcript MGP_BALBcJ_T0025778.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74328329 74345585 + Lss protein_coding retained_intron MGP_BALBcJ_T0025779.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74328329 74352196 + MGP_BALBcJ_P0025779 Lss protein_coding protein_coding MGP_BALBcJ_T0025780.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74328334 74353855 + Lss protein_coding retained_intron MGP_BALBcJ_T0025781.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74328404 74332446 + Lss protein_coding retained_intron MGP_BALBcJ_T0025782.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74338598 74339463 + MGP_BALBcJ_P0025782 Lss protein_coding protein_coding MGP_BALBcJ_T0025783.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74347926 74353335 + Lss protein_coding retained_intron MGP_BALBcJ_T0025784.1 MGP_BALBcJ_G0017322.1 mouse_genomes_project 10 74348987 74349950 + Lss protein_coding retained_intron MGP_BALBcJ_T0027572.1 MGP_BALBcJ_G0017874.1 mouse_genomes_project 10 128803987 128805045 - MGP_BALBcJ_P0027572 Olfr814 protein_coding protein_coding MGP_BALBcJ_T0027573.1 MGP_BALBcJ_G0017874.1 mouse_genomes_project 10 128803987 128805027 - MGP_BALBcJ_P0027573 Olfr814 protein_coding protein_coding MGP_BALBcJ_T0024851.1 MGP_BALBcJ_G0017065.1 mouse_genomes_project 10 30499958 30909617 + MGP_BALBcJ_P0024851 Trdn protein_coding unknown_likely_coding MGP_BALBcJ_T0024852.1 MGP_BALBcJ_G0017065.1 mouse_genomes_project 10 30500384 30911808 + MGP_BALBcJ_P0024852 Trdn protein_coding protein_coding MGP_BALBcJ_T0003056.1 MGP_BALBcJ_G0002852.1 mouse_genomes_project 10 84401228 84405256 + Gm15990 antisense antisense MGP_BALBcJ_T0025211.1 MGP_BALBcJ_G0017193.1 mouse_genomes_project 10 56845521 56895693 + MGP_BALBcJ_P0025211 P4ha1 protein_coding protein_coding MGP_BALBcJ_T0025212.1 MGP_BALBcJ_G0017193.1 mouse_genomes_project 10 56845589 56894356 + MGP_BALBcJ_P0025212 P4ha1 protein_coding protein_coding MGP_BALBcJ_T0025213.1 MGP_BALBcJ_G0017193.1 mouse_genomes_project 10 56845593 56894651 + MGP_BALBcJ_P0025213 P4ha1 protein_coding protein_coding MGP_BALBcJ_T0027578.1 MGP_BALBcJ_G0017878.1 mouse_genomes_project 10 128903543 128906277 - MGP_BALBcJ_P0027578 protein_coding protein_coding MGP_BALBcJ_T0024663.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17436272 17466253 + MGP_BALBcJ_P0024663 Bclaf1 protein_coding protein_coding MGP_BALBcJ_T0024664.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17436275 17464019 + MGP_BALBcJ_P0024664 Bclaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024665.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17436287 17466251 + MGP_BALBcJ_P0024665 Bclaf1 protein_coding protein_coding MGP_BALBcJ_T0024666.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17436331 17446363 + Bclaf1 protein_coding retained_intron MGP_BALBcJ_T0024667.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17436332 17464015 + MGP_BALBcJ_P0024667 Bclaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024668.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17436340 17464016 + MGP_BALBcJ_P0024668 Bclaf1 protein_coding protein_coding MGP_BALBcJ_T0024669.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17447487 17468364 + MGP_BALBcJ_P0024669 Bclaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024670.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17449808 17456022 + MGP_BALBcJ_P0024670 Bclaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024671.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17452812 17457654 + Bclaf1 protein_coding retained_intron MGP_BALBcJ_T0024672.1 MGP_BALBcJ_G0016990.1 mouse_genomes_project 10 17457017 17463959 + Bclaf1 protein_coding retained_intron MGP_BALBcJ_T0006058.1 MGP_BALBcJ_G0005072.1 mouse_genomes_project 10 18956269 18972425 - Platr6 lincRNA lincRNA MGP_BALBcJ_T0026251.1 MGP_BALBcJ_G0017447.1 mouse_genomes_project 10 78569851 78580041 - MGP_BALBcJ_P0026251 Klf16 protein_coding protein_coding MGP_BALBcJ_T0100446.1 MGP_BALBcJ_G0038482.1 mouse_genomes_project 10 60574173 60574302 - Gm25862 snoRNA snoRNA MGP_BALBcJ_T0100437.1 MGP_BALBcJ_G0038473.1 mouse_genomes_project 10 38815741 38815873 + Gm25526 snoRNA snoRNA MGP_BALBcJ_T0025202.1 MGP_BALBcJ_G0017188.1 mouse_genomes_project 10 56228990 56229275 + MGP_BALBcJ_P0025202 BB019430 protein_coding protein_coding MGP_BALBcJ_T0025405.1 MGP_BALBcJ_G0017240.1 mouse_genomes_project 10 60201732 60227309 - MGP_BALBcJ_P0025405 Ddx21 protein_coding protein_coding MGP_BALBcJ_T0025729.1 MGP_BALBcJ_G0017302.1 mouse_genomes_project 10 73558656 73573266 - MGP_BALBcJ_P0025729 Gstt1 protein_coding protein_coding MGP_BALBcJ_T0025730.1 MGP_BALBcJ_G0017302.1 mouse_genomes_project 10 73558827 73572253 - MGP_BALBcJ_P0025730 Gstt1 protein_coding protein_coding MGP_BALBcJ_T0025731.1 MGP_BALBcJ_G0017302.1 mouse_genomes_project 10 73561638 73572413 - MGP_BALBcJ_P0025731 Gstt1 protein_coding protein_coding MGP_BALBcJ_T0025115.1 MGP_BALBcJ_G0017155.1 mouse_genomes_project 10 49421771 49466179 + Rfx6 protein_coding retained_intron MGP_BALBcJ_T0025116.1 MGP_BALBcJ_G0017155.1 mouse_genomes_project 10 49421771 49474707 + MGP_BALBcJ_P0025116 Rfx6 protein_coding protein_coding MGP_BALBcJ_T0025117.1 MGP_BALBcJ_G0017155.1 mouse_genomes_project 10 49429856 49474707 + MGP_BALBcJ_P0025117 Rfx6 protein_coding protein_coding MGP_BALBcJ_T0027412.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127030119 127052179 + Timeless protein_coding retained_intron MGP_BALBcJ_T0027413.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127030128 127052099 + MGP_BALBcJ_P0027413 Timeless protein_coding protein_coding MGP_BALBcJ_T0027414.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127030130 127045356 + MGP_BALBcJ_P0027414 Timeless protein_coding protein_coding MGP_BALBcJ_T0027415.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127030154 127040922 + MGP_BALBcJ_P0027415 Timeless protein_coding protein_coding MGP_BALBcJ_T0027416.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127030173 127052188 + MGP_BALBcJ_P0027416 Timeless protein_coding protein_coding MGP_BALBcJ_T0027417.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127039147 127052161 + MGP_BALBcJ_P0027417 Timeless protein_coding unknown_likely_coding MGP_BALBcJ_T0027418.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127039647 127040862 + Timeless protein_coding retained_intron MGP_BALBcJ_T0027419.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127041585 127042257 + Timeless protein_coding retained_intron MGP_BALBcJ_T0027420.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127041654 127043175 + Timeless protein_coding processed_transcript MGP_BALBcJ_T0027421.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127041875 127042942 + Timeless protein_coding retained_intron MGP_BALBcJ_T0027422.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127046526 127047294 + Timeless protein_coding retained_intron MGP_BALBcJ_T0027423.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127046581 127052186 + Timeless protein_coding processed_transcript MGP_BALBcJ_T0027424.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127048459 127049107 + Timeless protein_coding retained_intron MGP_BALBcJ_T0027425.1 MGP_BALBcJ_G0017792.1 mouse_genomes_project 10 127048865 127049619 + Timeless protein_coding retained_intron MGP_BALBcJ_T0009590.1 MGP_BALBcJ_G0007715.1 mouse_genomes_project 10 90449885 90449985 - Mir135a-2 miRNA miRNA MGP_BALBcJ_T0024840.1 MGP_BALBcJ_G0017061.1 mouse_genomes_project 10 28750256 28765079 + MGP_BALBcJ_P0024840 Hddc2 protein_coding protein_coding MGP_BALBcJ_T0024841.1 MGP_BALBcJ_G0017061.1 mouse_genomes_project 10 28750279 28753907 + Hddc2 protein_coding retained_intron MGP_BALBcJ_T0024842.1 MGP_BALBcJ_G0017061.1 mouse_genomes_project 10 28750281 28754718 + Hddc2 protein_coding retained_intron MGP_BALBcJ_T0024843.1 MGP_BALBcJ_G0017061.1 mouse_genomes_project 10 28750346 28765059 + MGP_BALBcJ_P0024843 Hddc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024844.1 MGP_BALBcJ_G0017061.1 mouse_genomes_project 10 28757041 28765077 + Hddc2 protein_coding retained_intron MGP_BALBcJ_T0024743.1 MGP_BALBcJ_G0017025.1 mouse_genomes_project 10 21413218 21414295 + MGP_BALBcJ_P0024743 Taar7d protein_coding protein_coding MGP_BALBcJ_T0027286.1 MGP_BALBcJ_G0017753.1 mouse_genomes_project 10 126023075 126038857 + MGP_BALBcJ_P0027286 Dctn2 protein_coding protein_coding MGP_BALBcJ_T0099165.1 MGP_BALBcJ_G0037201.1 mouse_genomes_project 10 5566845 5566951 + Gm24374 snRNA snRNA MGP_BALBcJ_T0027498.1 MGP_BALBcJ_G0017826.1 mouse_genomes_project 10 127698598 127708010 - MGP_BALBcJ_P0027498 protein_coding protein_coding MGP_BALBcJ_T0024989.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39132294 39146298 - Ccdc162 protein_coding processed_transcript MGP_BALBcJ_T0024990.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39132297 39200379 - MGP_BALBcJ_P0024990 Ccdc162 protein_coding protein_coding MGP_BALBcJ_T0024991.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39132297 39181742 - MGP_BALBcJ_P0024991 Ccdc162 protein_coding protein_coding MGP_BALBcJ_T0024992.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39132740 39306286 - MGP_BALBcJ_P0024992 Ccdc162 protein_coding unknown_likely_coding MGP_BALBcJ_T0024993.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39132863 39173110 - MGP_BALBcJ_P0024993 Ccdc162 protein_coding protein_coding MGP_BALBcJ_T0024994.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39142376 39154125 - Ccdc162 protein_coding retained_intron MGP_BALBcJ_T0024995.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39144056 39305639 - MGP_BALBcJ_P0024995 Ccdc162 protein_coding protein_coding MGP_BALBcJ_T0024996.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39144175 39146866 - Ccdc162 protein_coding retained_intron MGP_BALBcJ_T0024997.1 MGP_BALBcJ_G0017116.1 mouse_genomes_project 10 39174127 39182029 - Ccdc162 protein_coding processed_transcript MGP_BALBcJ_T0025676.1 MGP_BALBcJ_G0017289.1 mouse_genomes_project 10 72971935 73073189 + MGP_BALBcJ_P0025676 Specc1l protein_coding protein_coding MGP_BALBcJ_T0025677.1 MGP_BALBcJ_G0017289.1 mouse_genomes_project 10 72990372 73073189 + MGP_BALBcJ_P0025677 Specc1l protein_coding protein_coding MGP_BALBcJ_T0024713.1 MGP_BALBcJ_G0017007.1 mouse_genomes_project 10 19640569 19654053 + MGP_BALBcJ_P0024713 protein_coding protein_coding MGP_BALBcJ_T0024715.1 MGP_BALBcJ_G0017007.1 mouse_genomes_project 10 19641216 19654053 + MGP_BALBcJ_P0024715 protein_coding protein_coding MGP_BALBcJ_T0027259.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125814970 125819993 + MGP_BALBcJ_P0027259 Cdk4 protein_coding protein_coding MGP_BALBcJ_T0027260.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815039 125818440 + MGP_BALBcJ_P0027260 Cdk4 protein_coding protein_coding MGP_BALBcJ_T0027261.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815040 125817614 + MGP_BALBcJ_P0027261 Cdk4 protein_coding protein_coding MGP_BALBcJ_T0027262.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815045 125818440 + MGP_BALBcJ_P0027262 Cdk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027263.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815050 125819370 + Cdk4 protein_coding retained_intron MGP_BALBcJ_T0027264.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815052 125816717 + Cdk4 protein_coding retained_intron MGP_BALBcJ_T0027265.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815304 125817668 + MGP_BALBcJ_P0027265 Cdk4 protein_coding protein_coding MGP_BALBcJ_T0027266.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125815734 125816752 + Cdk4 protein_coding retained_intron MGP_BALBcJ_T0027267.1 MGP_BALBcJ_G0017743.1 mouse_genomes_project 10 125817512 125818670 + Cdk4 protein_coding retained_intron MGP_BALBcJ_T0025088.1 MGP_BALBcJ_G0017145.1 mouse_genomes_project 10 43032946 43074100 + MGP_BALBcJ_P0025088 Bves protein_coding unknown_likely_coding MGP_BALBcJ_T0024818.1 MGP_BALBcJ_G0017050.1 mouse_genomes_project 10 26599774 26655443 + MGP_BALBcJ_P0024818 Soga3 protein_coding protein_coding MGP_BALBcJ_T0099190.1 MGP_BALBcJ_G0037226.1 mouse_genomes_project 10 52467496 52467558 - Gm25602 snRNA snRNA MGP_BALBcJ_T0027489.1 MGP_BALBcJ_G0017820.1 mouse_genomes_project 10 127564835 127584180 + MGP_BALBcJ_P0027489 Pym1 protein_coding protein_coding MGP_BALBcJ_T0027490.1 MGP_BALBcJ_G0017820.1 mouse_genomes_project 10 127565411 127583499 + MGP_BALBcJ_P0027490 Pym1 protein_coding protein_coding MGP_BALBcJ_T0026581.1 MGP_BALBcJ_G0017534.1 mouse_genomes_project 10 82748687 82756271 - MGP_BALBcJ_P0026581 Ckap4 protein_coding protein_coding MGP_BALBcJ_T0026582.1 MGP_BALBcJ_G0017534.1 mouse_genomes_project 10 82749018 82756419 - MGP_BALBcJ_P0026582 Ckap4 protein_coding protein_coding MGP_BALBcJ_T0099182.1 MGP_BALBcJ_G0037218.1 mouse_genomes_project 10 42425425 42425540 + Gm22503 snRNA snRNA MGP_BALBcJ_T0024862.1 MGP_BALBcJ_G0017071.1 mouse_genomes_project 10 31418381 31418447 - MGP_BALBcJ_P0024862 Gm17567 protein_coding protein_coding MGP_BALBcJ_T0025318.1 MGP_BALBcJ_G0017218.1 mouse_genomes_project 10 59036047 59057252 - MGP_BALBcJ_P0025318 Eif4ebp2 protein_coding protein_coding MGP_BALBcJ_T0009595.1 MGP_BALBcJ_G0007720.1 mouse_genomes_project 10 92979819 92979882 - Mir7211 miRNA miRNA MGP_BALBcJ_T0024648.1 MGP_BALBcJ_G0016986.1 mouse_genomes_project 10 16967852 17016432 - MGP_BALBcJ_P0024648 Pex7 protein_coding protein_coding MGP_BALBcJ_T0024649.1 MGP_BALBcJ_G0016986.1 mouse_genomes_project 10 16968020 17016417 - MGP_BALBcJ_P0024649 Pex7 protein_coding protein_coding MGP_BALBcJ_T0024650.1 MGP_BALBcJ_G0016986.1 mouse_genomes_project 10 16968712 16977836 - Pex7 protein_coding retained_intron MGP_BALBcJ_T0024651.1 MGP_BALBcJ_G0016986.1 mouse_genomes_project 10 16993523 17016288 - MGP_BALBcJ_P0024651 Pex7 protein_coding protein_coding MGP_BALBcJ_T0024741.1 MGP_BALBcJ_G0017023.1 mouse_genomes_project 10 21382672 21384948 + MGP_BALBcJ_P0024741 protein_coding protein_coding MGP_BALBcJ_T0009567.1 MGP_BALBcJ_G0007692.1 mouse_genomes_project 10 73790060 73790152 + Mir6409 miRNA miRNA MGP_BALBcJ_T0025216.1 MGP_BALBcJ_G0017195.1 mouse_genomes_project 10 56942708 56961279 - MGP_BALBcJ_P0025216 Oit3 protein_coding protein_coding MGP_BALBcJ_T0025217.1 MGP_BALBcJ_G0017195.1 mouse_genomes_project 10 56947774 56950602 - Oit3 protein_coding retained_intron MGP_BALBcJ_T0011258.1 MGP_BALBcJ_G0009383.1 mouse_genomes_project 10 90480249 90480452 - Gm27753 misc_RNA misc_RNA MGP_BALBcJ_T0000829.1 MGP_BALBcJ_G0000761.1 mouse_genomes_project 10 118968149 118970645 + TEC TEC MGP_BALBcJ_T0009574.1 MGP_BALBcJ_G0007699.1 mouse_genomes_project 10 76402246 76402368 + Gm27541 miRNA miRNA MGP_BALBcJ_T0027076.1 MGP_BALBcJ_G0017684.1 mouse_genomes_project 10 115008473 115067702 - MGP_BALBcJ_P0027076 Kcnmb4 protein_coding protein_coding MGP_BALBcJ_T0027077.1 MGP_BALBcJ_G0017684.1 mouse_genomes_project 10 115026619 115067259 - MGP_BALBcJ_P0027077 Kcnmb4 protein_coding protein_coding MGP_BALBcJ_T0027078.1 MGP_BALBcJ_G0017684.1 mouse_genomes_project 10 115056471 115067246 - MGP_BALBcJ_P0027078 Kcnmb4 protein_coding protein_coding MGP_BALBcJ_T0027441.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127210774 127219073 - MGP_BALBcJ_P0027441 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027442.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127210774 127219219 - MGP_BALBcJ_P0027442 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027443.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127210853 127219067 - MGP_BALBcJ_P0027443 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027444.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127210969 127218188 - Nabp2 protein_coding retained_intron MGP_BALBcJ_T0027445.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127211279 127218977 - MGP_BALBcJ_P0027445 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027446.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127211289 127219896 - MGP_BALBcJ_P0027446 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027447.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127217507 127218525 - MGP_BALBcJ_P0027447 Nabp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027448.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127218063 127220837 - MGP_BALBcJ_P0027448 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027449.1 MGP_BALBcJ_G0017803.1 mouse_genomes_project 10 127218091 127219081 - MGP_BALBcJ_P0027449 Nabp2 protein_coding protein_coding MGP_BALBcJ_T0027569.1 MGP_BALBcJ_G0017872.1 mouse_genomes_project 10 128718771 128719731 - MGP_BALBcJ_P0027569 Olfr811 protein_coding protein_coding MGP_BALBcJ_T0027382.1 MGP_BALBcJ_G0017784.1 mouse_genomes_project 10 126822986 126836003 + MGP_BALBcJ_P0027382 Naca protein_coding protein_coding MGP_BALBcJ_T0027383.1 MGP_BALBcJ_G0017784.1 mouse_genomes_project 10 126822986 126836003 + MGP_BALBcJ_P0027383 Naca protein_coding protein_coding MGP_BALBcJ_T0009594.1 MGP_BALBcJ_G0007719.1 mouse_genomes_project 10 92348677 92348773 - Mir331 miRNA miRNA MGP_BALBcJ_T0012368.1 MGP_BALBcJ_G0010465.1 mouse_genomes_project 10 19624750 19626945 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006137.1 MGP_BALBcJ_G0005125.1 mouse_genomes_project 10 125951340 125958735 + F420014N23Rik lincRNA lincRNA MGP_BALBcJ_T0024847.1 MGP_BALBcJ_G0017063.1 mouse_genomes_project 10 28927704 29048862 - MGP_BALBcJ_P0024847 Rnf217 protein_coding protein_coding MGP_BALBcJ_T0026592.1 MGP_BALBcJ_G0017538.1 mouse_genomes_project 10 83138989 83237922 + MGP_BALBcJ_P0026592 Ric8b protein_coding protein_coding MGP_BALBcJ_T0026593.1 MGP_BALBcJ_G0017538.1 mouse_genomes_project 10 83139029 83237922 + MGP_BALBcJ_P0026593 Ric8b protein_coding protein_coding MGP_BALBcJ_T0025214.1 MGP_BALBcJ_G0017194.1 mouse_genomes_project 10 56922741 56941727 + MGP_BALBcJ_P0025214 Pla2g12b protein_coding protein_coding MGP_BALBcJ_T0025215.1 MGP_BALBcJ_G0017194.1 mouse_genomes_project 10 56930096 56941721 + MGP_BALBcJ_P0025215 Pla2g12b protein_coding protein_coding MGP_BALBcJ_T0026611.1 MGP_BALBcJ_G0017546.1 mouse_genomes_project 10 84167104 84192262 - MGP_BALBcJ_P0026611 Prdm4 protein_coding unknown_likely_coding MGP_BALBcJ_T0026612.1 MGP_BALBcJ_G0017546.1 mouse_genomes_project 10 84167113 84192270 - MGP_BALBcJ_P0026612 Prdm4 protein_coding protein_coding MGP_BALBcJ_T0027142.1 MGP_BALBcJ_G0017707.1 mouse_genomes_project 10 117496449 117505974 - MGP_BALBcJ_P0027142 Dyrk2 protein_coding protein_coding MGP_BALBcJ_T0026513.1 MGP_BALBcJ_G0017513.1 mouse_genomes_project 10 80216451 80223201 + MGP_BALBcJ_P0026513 protein_coding protein_coding MGP_BALBcJ_T0003091.1 MGP_BALBcJ_G0002877.1 mouse_genomes_project 10 127335954 127339328 + Gm29585 antisense antisense MGP_BALBcJ_T0003092.1 MGP_BALBcJ_G0002877.1 mouse_genomes_project 10 127338262 127339349 + Gm29585 antisense antisense MGP_BALBcJ_T0003093.1 MGP_BALBcJ_G0002877.1 mouse_genomes_project 10 127339019 127358792 + Gm29585 antisense antisense MGP_BALBcJ_T0006043.1 MGP_BALBcJ_G0005062.1 mouse_genomes_project 10 6430649 6434903 - Gm28904 lincRNA lincRNA MGP_BALBcJ_T0026019.1 MGP_BALBcJ_G0017399.1 mouse_genomes_project 10 77756811 77762166 + MGP_BALBcJ_P0026019 Fstl3 protein_coding protein_coding MGP_BALBcJ_T0026020.1 MGP_BALBcJ_G0017399.1 mouse_genomes_project 10 77756831 77758629 + Fstl3 protein_coding retained_intron MGP_BALBcJ_T0026021.1 MGP_BALBcJ_G0017399.1 mouse_genomes_project 10 77760116 77762143 + Fstl3 protein_coding processed_transcript MGP_BALBcJ_T0024918.1 MGP_BALBcJ_G0017092.1 mouse_genomes_project 10 37156130 37198213 + MGP_BALBcJ_P0024918 Traf3ip2 protein_coding protein_coding MGP_BALBcJ_T0024919.1 MGP_BALBcJ_G0017092.1 mouse_genomes_project 10 37184743 37189160 + Traf3ip2 protein_coding retained_intron MGP_BALBcJ_T0024920.1 MGP_BALBcJ_G0017092.1 mouse_genomes_project 10 37189524 37194322 + Traf3ip2 protein_coding processed_transcript MGP_BALBcJ_T0024921.1 MGP_BALBcJ_G0017092.1 mouse_genomes_project 10 37190115 37197729 + Traf3ip2 protein_coding retained_intron MGP_BALBcJ_T0024922.1 MGP_BALBcJ_G0017092.1 mouse_genomes_project 10 37193956 37197731 + Traf3ip2 protein_coding retained_intron MGP_BALBcJ_T0025020.1 MGP_BALBcJ_G0017122.1 mouse_genomes_project 10 39789206 39883220 - MGP_BALBcJ_P0025020 Foxo3 protein_coding protein_coding MGP_BALBcJ_T0025021.1 MGP_BALBcJ_G0017122.1 mouse_genomes_project 10 39793142 39883210 - MGP_BALBcJ_P0025021 Foxo3 protein_coding protein_coding MGP_BALBcJ_T0025022.1 MGP_BALBcJ_G0017122.1 mouse_genomes_project 10 39802131 39883164 - MGP_BALBcJ_P0025022 Foxo3 protein_coding protein_coding MGP_BALBcJ_T0025023.1 MGP_BALBcJ_G0017122.1 mouse_genomes_project 10 39803427 39864839 - MGP_BALBcJ_P0025023 Foxo3 protein_coding protein_coding MGP_BALBcJ_T0025024.1 MGP_BALBcJ_G0017122.1 mouse_genomes_project 10 39853606 39883223 - MGP_BALBcJ_P0025024 Foxo3 protein_coding protein_coding MGP_BALBcJ_T0027103.1 MGP_BALBcJ_G0017693.1 mouse_genomes_project 10 115817326 115826773 - MGP_BALBcJ_P0027103 Yeats4 protein_coding protein_coding MGP_BALBcJ_T0024791.1 MGP_BALBcJ_G0017044.1 mouse_genomes_project 10 24207639 24319972 + MGP_BALBcJ_P0024791 Arhgap18 protein_coding protein_coding MGP_BALBcJ_T0024792.1 MGP_BALBcJ_G0017044.1 mouse_genomes_project 10 24228700 24383127 + MGP_BALBcJ_P0024792 Arhgap18 protein_coding protein_coding MGP_BALBcJ_T0024793.1 MGP_BALBcJ_G0017044.1 mouse_genomes_project 10 24282033 24309239 + MGP_BALBcJ_P0024793 Arhgap18 protein_coding protein_coding MGP_BALBcJ_T0024794.1 MGP_BALBcJ_G0017044.1 mouse_genomes_project 10 24322601 24382937 + Arhgap18 protein_coding processed_transcript MGP_BALBcJ_T0098449.1 MGP_BALBcJ_G0036503.1 mouse_genomes_project 10 87055001 87055117 - n-R5s79 rRNA rRNA MGP_BALBcJ_T0027226.1 MGP_BALBcJ_G0017730.1 mouse_genomes_project 10 121708030 121790106 - MGP_BALBcJ_P0027226 Mon2 protein_coding protein_coding MGP_BALBcJ_T0027227.1 MGP_BALBcJ_G0017730.1 mouse_genomes_project 10 121708030 121790106 - MGP_BALBcJ_P0027227 Mon2 protein_coding protein_coding MGP_BALBcJ_T0027228.1 MGP_BALBcJ_G0017730.1 mouse_genomes_project 10 121708030 121790106 - MGP_BALBcJ_P0027228 Mon2 protein_coding protein_coding MGP_BALBcJ_T0102116.1 MGP_BALBcJ_G0039933.1 mouse_genomes_project 10 103723896 103724055 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0027580.1 MGP_BALBcJ_G0017880.1 mouse_genomes_project 10 128959500 128960561 + MGP_BALBcJ_P0027580 Olfr820 protein_coding protein_coding MGP_BALBcJ_T0099201.1 MGP_BALBcJ_G0037237.1 mouse_genomes_project 10 78476529 78476633 + Gm25044 snRNA snRNA MGP_BALBcJ_T0026366.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79275245 79285309 + MGP_BALBcJ_P0026366 Matk protein_coding protein_coding MGP_BALBcJ_T0026367.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79279622 79285689 + MGP_BALBcJ_P0026367 Matk protein_coding protein_coding MGP_BALBcJ_T0026368.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79279622 79285689 + MGP_BALBcJ_P0026368 Matk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026369.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79279622 79285305 + MGP_BALBcJ_P0026369 Matk protein_coding protein_coding MGP_BALBcJ_T0026370.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79279628 79285305 + MGP_BALBcJ_P0026370 Matk protein_coding protein_coding MGP_BALBcJ_T0026371.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79279665 79285309 + Matk protein_coding retained_intron MGP_BALBcJ_T0026372.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79279771 79282850 + Matk protein_coding retained_intron MGP_BALBcJ_T0026373.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79280153 79281977 + MGP_BALBcJ_P0026373 Matk protein_coding protein_coding MGP_BALBcJ_T0026374.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79280241 79285299 + MGP_BALBcJ_P0026374 Matk protein_coding protein_coding MGP_BALBcJ_T0026375.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79280538 79285237 + Matk protein_coding retained_intron MGP_BALBcJ_T0026376.1 MGP_BALBcJ_G0017485.1 mouse_genomes_project 10 79283493 79284991 + Matk protein_coding retained_intron MGP_BALBcJ_T0100449.1 MGP_BALBcJ_G0038485.1 mouse_genomes_project 10 69636305 69636436 + Gm22937 snoRNA snoRNA MGP_BALBcJ_T0027487.1 MGP_BALBcJ_G0017818.1 mouse_genomes_project 10 127522909 127537280 + MGP_BALBcJ_P0027487 Pmel protein_coding protein_coding MGP_BALBcJ_T0025315.1 MGP_BALBcJ_G0017215.1 mouse_genomes_project 10 58888787 58895215 + MGP_BALBcJ_P0025315 Prf1 protein_coding protein_coding MGP_BALBcJ_T0024876.1 MGP_BALBcJ_G0017081.1 mouse_genomes_project 10 31826115 31833220 + MGP_BALBcJ_P0024876 Col10a1 protein_coding protein_coding MGP_BALBcJ_T0101605.1 MGP_BALBcJ_G0039626.1 mouse_genomes_project 10 85251476 85254714 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0009558.1 MGP_BALBcJ_G0007683.1 mouse_genomes_project 10 56486260 56486464 + Gm27672 miRNA miRNA MGP_BALBcJ_T0027545.1 MGP_BALBcJ_G0017855.1 mouse_genomes_project 10 128397521 128398490 + MGP_BALBcJ_P0027545 Olfr790 protein_coding protein_coding MGP_BALBcJ_T0026380.1 MGP_BALBcJ_G0017488.1 mouse_genomes_project 10 79295525 79313945 - MGP_BALBcJ_P0026380 Tjp3 protein_coding protein_coding MGP_BALBcJ_T0003043.1 MGP_BALBcJ_G0002843.1 mouse_genomes_project 10 79213515 79217346 + Atcayos antisense antisense MGP_BALBcJ_T0003044.1 MGP_BALBcJ_G0002843.1 mouse_genomes_project 10 79213589 79228901 + Atcayos antisense antisense MGP_BALBcJ_T0003045.1 MGP_BALBcJ_G0002843.1 mouse_genomes_project 10 79213597 79230613 + Atcayos antisense antisense MGP_BALBcJ_T0024890.1 MGP_BALBcJ_G0017086.1 mouse_genomes_project 10 36346662 36347901 - MGP_BALBcJ_P0024890 Rfpl4b protein_coding protein_coding MGP_BALBcJ_T0006098.1 MGP_BALBcJ_G0005105.1 mouse_genomes_project 10 88038412 88053481 + 1500026H17Rik lincRNA lincRNA MGP_BALBcJ_T0011248.1 MGP_BALBcJ_G0009373.1 mouse_genomes_project 10 40112308 40112632 - Gm25277 misc_RNA misc_RNA MGP_BALBcJ_T0025806.1 MGP_BALBcJ_G0017328.1 mouse_genomes_project 10 74811722 74821708 + MGP_BALBcJ_P0025806 Gm10787 protein_coding protein_coding MGP_BALBcJ_T0026094.1 MGP_BALBcJ_G0017418.1 mouse_genomes_project 10 78000233 78015713 + MGP_BALBcJ_P0026094 Hmha1 protein_coding protein_coding MGP_BALBcJ_T0026095.1 MGP_BALBcJ_G0017418.1 mouse_genomes_project 10 78000319 78015710 + Hmha1 protein_coding retained_intron MGP_BALBcJ_T0026096.1 MGP_BALBcJ_G0017418.1 mouse_genomes_project 10 78000496 78015710 + MGP_BALBcJ_P0026096 Hmha1 protein_coding protein_coding MGP_BALBcJ_T0026097.1 MGP_BALBcJ_G0017418.1 mouse_genomes_project 10 78003637 78015709 + MGP_BALBcJ_P0026097 Hmha1 protein_coding protein_coding MGP_BALBcJ_T0026098.1 MGP_BALBcJ_G0017418.1 mouse_genomes_project 10 78005727 78015703 + Hmha1 protein_coding retained_intron MGP_BALBcJ_T0026607.1 MGP_BALBcJ_G0017545.1 mouse_genomes_project 10 84146878 84164240 + MGP_BALBcJ_P0026607 Pwp1 protein_coding protein_coding MGP_BALBcJ_T0026608.1 MGP_BALBcJ_G0017545.1 mouse_genomes_project 10 84146931 84159832 + Pwp1 protein_coding retained_intron MGP_BALBcJ_T0026609.1 MGP_BALBcJ_G0017545.1 mouse_genomes_project 10 84146953 84157176 + MGP_BALBcJ_P0026609 Pwp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026610.1 MGP_BALBcJ_G0017545.1 mouse_genomes_project 10 84151301 84159631 + Pwp1 protein_coding retained_intron MGP_BALBcJ_T0100462.1 MGP_BALBcJ_G0038498.1 mouse_genomes_project 10 104549049 104549171 - Gm25342 snoRNA snoRNA MGP_BALBcJ_T0024732.1 MGP_BALBcJ_G0017014.1 mouse_genomes_project 10 21230029 21242414 + MGP_BALBcJ_P0024732 Vnn3 protein_coding protein_coding MGP_BALBcJ_T0026044.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77841066 77855845 - MGP_BALBcJ_P0026044 Plppr3 protein_coding protein_coding MGP_BALBcJ_T0026047.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77846084 77855641 - Plppr3 protein_coding retained_intron MGP_BALBcJ_T0026048.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77846084 77855845 - Plppr3 protein_coding retained_intron MGP_BALBcJ_T0026049.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77846084 77855909 - MGP_BALBcJ_P0026049 Plppr3 protein_coding protein_coding MGP_BALBcJ_T0026050.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77847715 77848585 - Plppr3 protein_coding retained_intron MGP_BALBcJ_T0026051.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77847735 77855499 - MGP_BALBcJ_P0026051 Plppr3 protein_coding protein_coding MGP_BALBcJ_T0026052.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77847741 77855683 - MGP_BALBcJ_P0026052 Plppr3 protein_coding protein_coding MGP_BALBcJ_T0026053.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77848157 77855664 - Plppr3 protein_coding processed_transcript MGP_BALBcJ_T0026054.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77848211 77855674 - MGP_BALBcJ_P0026054 Plppr3 protein_coding protein_coding MGP_BALBcJ_T0026055.1 MGP_BALBcJ_G0017404.1 mouse_genomes_project 10 77848762 77855645 - MGP_BALBcJ_P0026055 Plppr3 protein_coding protein_coding MGP_BALBcJ_T0006089.1 MGP_BALBcJ_G0005097.1 mouse_genomes_project 10 78581366 78583397 + Gm26710 lincRNA lincRNA MGP_BALBcJ_T0027075.1 MGP_BALBcJ_G0017683.1 mouse_genomes_project 10 114887948 114980411 + MGP_BALBcJ_P0027075 Ptprb protein_coding protein_coding MGP_BALBcJ_T0026839.1 MGP_BALBcJ_G0017599.1 mouse_genomes_project 10 92211084 92228877 + MGP_BALBcJ_P0026839 Usp44 protein_coding protein_coding MGP_BALBcJ_T0099187.1 MGP_BALBcJ_G0037223.1 mouse_genomes_project 10 48940932 48941039 + Gm26257 snRNA snRNA MGP_BALBcJ_T0027496.1 MGP_BALBcJ_G0017824.1 mouse_genomes_project 10 127635119 127639312 - MGP_BALBcJ_P0027496 Ormdl2 protein_coding protein_coding MGP_BALBcJ_T0003024.1 MGP_BALBcJ_G0002827.1 mouse_genomes_project 10 65750246 65751107 - Gm16212 antisense antisense MGP_BALBcJ_T0003025.1 MGP_BALBcJ_G0002827.1 mouse_genomes_project 10 65750819 65751430 - Gm16212 antisense antisense MGP_BALBcJ_T0025157.1 MGP_BALBcJ_G0017172.1 mouse_genomes_project 10 53891114 53901049 + MGP_BALBcJ_P0025157 Msl3l2 protein_coding protein_coding MGP_BALBcJ_T0003026.1 MGP_BALBcJ_G0002828.1 mouse_genomes_project 10 68026439 68027158 - Gm7097 antisense antisense MGP_BALBcJ_T0026344.1 MGP_BALBcJ_G0017478.1 mouse_genomes_project 10 79165573 79181403 - MGP_BALBcJ_P0026344 Pias4 protein_coding protein_coding MGP_BALBcJ_T0026345.1 MGP_BALBcJ_G0017478.1 mouse_genomes_project 10 79166542 79168432 - Pias4 protein_coding retained_intron MGP_BALBcJ_T0026346.1 MGP_BALBcJ_G0017478.1 mouse_genomes_project 10 79167809 79170319 - Pias4 protein_coding retained_intron MGP_BALBcJ_T0026347.1 MGP_BALBcJ_G0017478.1 mouse_genomes_project 10 79167979 79181201 - MGP_BALBcJ_P0026347 Pias4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026348.1 MGP_BALBcJ_G0017478.1 mouse_genomes_project 10 79168166 79169567 - MGP_BALBcJ_P0026348 Pias4 protein_coding protein_coding MGP_BALBcJ_T0026349.1 MGP_BALBcJ_G0017478.1 mouse_genomes_project 10 79175291 79181194 - Pias4 protein_coding retained_intron MGP_BALBcJ_T0025775.1 MGP_BALBcJ_G0017320.1 mouse_genomes_project 10 74257020 74267196 - MGP_BALBcJ_P0025775 Ybey protein_coding protein_coding MGP_BALBcJ_T0003011.1 MGP_BALBcJ_G0002816.1 mouse_genomes_project 10 40320301 40320784 - Gm15200 antisense antisense MGP_BALBcJ_T0027070.1 MGP_BALBcJ_G0017681.1 mouse_genomes_project 10 114607662 114860904 + MGP_BALBcJ_P0027070 Ptprr protein_coding protein_coding MGP_BALBcJ_T0027071.1 MGP_BALBcJ_G0017681.1 mouse_genomes_project 10 114607736 114703427 + Ptprr protein_coding processed_transcript MGP_BALBcJ_T0027073.1 MGP_BALBcJ_G0017681.1 mouse_genomes_project 10 114731956 114860909 + MGP_BALBcJ_P0027073 Ptprr protein_coding protein_coding MGP_BALBcJ_T0027074.1 MGP_BALBcJ_G0017681.1 mouse_genomes_project 10 114779863 114820730 + Ptprr protein_coding processed_transcript MGP_BALBcJ_T0024708.1 MGP_BALBcJ_G0017002.1 mouse_genomes_project 10 19171169 19176263 - MGP_BALBcJ_P0024708 protein_coding protein_coding MGP_BALBcJ_T0026262.1 MGP_BALBcJ_G0017452.1 mouse_genomes_project 10 78646385 78661227 - MGP_BALBcJ_P0026262 Btbd2 protein_coding protein_coding MGP_BALBcJ_T0026263.1 MGP_BALBcJ_G0017452.1 mouse_genomes_project 10 78646385 78660650 - MGP_BALBcJ_P0026263 Btbd2 protein_coding protein_coding MGP_BALBcJ_T0026264.1 MGP_BALBcJ_G0017452.1 mouse_genomes_project 10 78646391 78648416 - Btbd2 protein_coding retained_intron MGP_BALBcJ_T0026265.1 MGP_BALBcJ_G0017452.1 mouse_genomes_project 10 78647899 78651866 - Btbd2 protein_coding retained_intron MGP_BALBcJ_T0026266.1 MGP_BALBcJ_G0017452.1 mouse_genomes_project 10 78648421 78660294 - MGP_BALBcJ_P0026266 Btbd2 protein_coding protein_coding MGP_BALBcJ_T0009547.1 MGP_BALBcJ_G0007672.1 mouse_genomes_project 10 20116773 20116834 - Mir7663 miRNA miRNA MGP_BALBcJ_T0024789.1 MGP_BALBcJ_G0017043.1 mouse_genomes_project 10 23712130 23815209 - MGP_BALBcJ_P0024789 L3mbtl3 protein_coding unknown_likely_coding MGP_BALBcJ_T0024790.1 MGP_BALBcJ_G0017043.1 mouse_genomes_project 10 23712138 23813322 - MGP_BALBcJ_P0024790 L3mbtl3 protein_coding protein_coding MGP_BALBcJ_T0025941.1 MGP_BALBcJ_G0017366.1 mouse_genomes_project 10 76467315 76474733 - MGP_BALBcJ_P0025941 Syde1 protein_coding protein_coding MGP_BALBcJ_T0024499.1 MGP_BALBcJ_G0016945.1 mouse_genomes_project 10 7504296 7538228 - MGP_BALBcJ_P0024499 Rab32 protein_coding protein_coding MGP_BALBcJ_T0027589.1 MGP_BALBcJ_G0017887.1 mouse_genomes_project 10 129159391 129160449 - MGP_BALBcJ_P0027589 Olfr827 protein_coding protein_coding MGP_BALBcJ_T0024746.1 MGP_BALBcJ_G0017028.1 mouse_genomes_project 10 21483786 21484962 - MGP_BALBcJ_P0024746 Taar8b protein_coding protein_coding MGP_BALBcJ_T0009613.1 MGP_BALBcJ_G0007738.1 mouse_genomes_project 10 125745566 125745650 + Mir26a-2 miRNA miRNA MGP_BALBcJ_T0026556.1 MGP_BALBcJ_G0017529.1 mouse_genomes_project 10 81693768 81745602 - MGP_BALBcJ_P0026556 Aldh1l2 protein_coding protein_coding MGP_BALBcJ_T0026557.1 MGP_BALBcJ_G0017529.1 mouse_genomes_project 10 81696526 81699208 - Aldh1l2 protein_coding processed_transcript MGP_BALBcJ_T0026558.1 MGP_BALBcJ_G0017529.1 mouse_genomes_project 10 81697930 81700693 - Aldh1l2 protein_coding processed_transcript MGP_BALBcJ_T0026559.1 MGP_BALBcJ_G0017529.1 mouse_genomes_project 10 81697932 81745669 - Aldh1l2 protein_coding retained_intron MGP_BALBcJ_T0026560.1 MGP_BALBcJ_G0017529.1 mouse_genomes_project 10 81703000 81720334 - Aldh1l2 protein_coding processed_transcript MGP_BALBcJ_T0026561.1 MGP_BALBcJ_G0017529.1 mouse_genomes_project 10 81715981 81725934 - Aldh1l2 protein_coding processed_transcript MGP_BALBcJ_T0026169.1 MGP_BALBcJ_G0017430.1 mouse_genomes_project 10 78244530 78252203 + MGP_BALBcJ_P0026169 Ndufs7 protein_coding protein_coding MGP_BALBcJ_T0026170.1 MGP_BALBcJ_G0017430.1 mouse_genomes_project 10 78244858 78248823 + Ndufs7 protein_coding retained_intron MGP_BALBcJ_T0026171.1 MGP_BALBcJ_G0017430.1 mouse_genomes_project 10 78244861 78252202 + MGP_BALBcJ_P0026171 Ndufs7 protein_coding protein_coding MGP_BALBcJ_T0026172.1 MGP_BALBcJ_G0017430.1 mouse_genomes_project 10 78244869 78249351 + Ndufs7 protein_coding retained_intron MGP_BALBcJ_T0026173.1 MGP_BALBcJ_G0017430.1 mouse_genomes_project 10 78244894 78252204 + Ndufs7 protein_coding processed_transcript MGP_BALBcJ_T0026174.1 MGP_BALBcJ_G0017430.1 mouse_genomes_project 10 78248724 78250550 + Ndufs7 protein_coding retained_intron MGP_BALBcJ_T0025031.1 MGP_BALBcJ_G0017125.1 mouse_genomes_project 10 40182480 40203166 - MGP_BALBcJ_P0025031 Nr2e1 protein_coding protein_coding MGP_BALBcJ_T0025032.1 MGP_BALBcJ_G0017125.1 mouse_genomes_project 10 40183501 40188983 - MGP_BALBcJ_P0025032 Nr2e1 protein_coding protein_coding MGP_BALBcJ_T0025033.1 MGP_BALBcJ_G0017125.1 mouse_genomes_project 10 40191638 40200486 - MGP_BALBcJ_P0025033 Nr2e1 protein_coding protein_coding MGP_BALBcJ_T0025504.1 MGP_BALBcJ_G0017267.1 mouse_genomes_project 10 66151735 66262357 - MGP_BALBcJ_P0025504 1700040L02Rik protein_coding protein_coding MGP_BALBcJ_T0025505.1 MGP_BALBcJ_G0017267.1 mouse_genomes_project 10 66157375 66245808 - MGP_BALBcJ_P0025505 1700040L02Rik protein_coding protein_coding MGP_BALBcJ_T0024931.1 MGP_BALBcJ_G0017095.1 mouse_genomes_project 10 37489315 37495857 - MGP_BALBcJ_P0024931 Mfsd4b2 protein_coding protein_coding MGP_BALBcJ_T0024366.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1507423 1791811 + Esr1 protein_coding processed_transcript MGP_BALBcJ_T0024367.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1507820 1901789 + MGP_BALBcJ_P0024367 Esr1 protein_coding protein_coding MGP_BALBcJ_T0024368.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1507827 1570027 + Esr1 protein_coding retained_intron MGP_BALBcJ_T0024369.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1507844 1755306 + Esr1 protein_coding retained_intron MGP_BALBcJ_T0024370.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1507852 1899936 + MGP_BALBcJ_P0024370 Esr1 protein_coding protein_coding MGP_BALBcJ_T0024371.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1609165 1898155 + MGP_BALBcJ_P0024371 Esr1 protein_coding protein_coding MGP_BALBcJ_T0024372.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1609165 1860635 + MGP_BALBcJ_P0024372 Esr1 protein_coding protein_coding MGP_BALBcJ_T0024373.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1611661 1682694 + Esr1 protein_coding processed_transcript MGP_BALBcJ_T0024374.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1816433 1894061 + Esr1 protein_coding processed_transcript MGP_BALBcJ_T0024375.1 MGP_BALBcJ_G0016917.1 mouse_genomes_project 10 1831839 1897787 + Esr1 protein_coding processed_transcript MGP_BALBcJ_T0026327.1 MGP_BALBcJ_G0017475.1 mouse_genomes_project 10 79094048 79109180 - MGP_BALBcJ_P0026327 Creb3l3 protein_coding protein_coding MGP_BALBcJ_T0026328.1 MGP_BALBcJ_G0017475.1 mouse_genomes_project 10 79099891 79102524 - Creb3l3 protein_coding retained_intron MGP_BALBcJ_T0026329.1 MGP_BALBcJ_G0017475.1 mouse_genomes_project 10 79100571 79101855 - Creb3l3 protein_coding retained_intron MGP_BALBcJ_T0026330.1 MGP_BALBcJ_G0017475.1 mouse_genomes_project 10 79102579 79109060 - Creb3l3 protein_coding processed_transcript MGP_BALBcJ_T0025137.1 MGP_BALBcJ_G0017165.1 mouse_genomes_project 10 51051567 51152460 - MGP_BALBcJ_P0025137 Cep85l protein_coding protein_coding MGP_BALBcJ_T0012356.1 MGP_BALBcJ_G0010453.1 mouse_genomes_project 10 4554916 4555646 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024857.1 MGP_BALBcJ_G0017067.1 mouse_genomes_project 10 31180436 31194937 - MGP_BALBcJ_P0024857 Sult3a2 protein_coding protein_coding MGP_BALBcJ_T0026901.1 MGP_BALBcJ_G0017612.1 mouse_genomes_project 10 93888553 93912774 - MGP_BALBcJ_P0026901 Mrpl42 protein_coding unknown_likely_coding MGP_BALBcJ_T0025675.1 MGP_BALBcJ_G0017288.1 mouse_genomes_project 10 72817411 72942835 + MGP_BALBcJ_P0025675 Bcr protein_coding protein_coding MGP_BALBcJ_T0026806.1 MGP_BALBcJ_G0017588.1 mouse_genomes_project 10 91068820 91106758 - MGP_BALBcJ_P0026806 Nedd1 protein_coding protein_coding MGP_BALBcJ_T0025128.1 MGP_BALBcJ_G0017160.1 mouse_genomes_project 10 50077687 50125628 - MGP_BALBcJ_P0025128 Gopc protein_coding protein_coding MGP_BALBcJ_T0025129.1 MGP_BALBcJ_G0017160.1 mouse_genomes_project 10 50077687 50125628 - MGP_BALBcJ_P0025129 Gopc protein_coding protein_coding MGP_BALBcJ_T0025130.1 MGP_BALBcJ_G0017160.1 mouse_genomes_project 10 50077718 50125402 - MGP_BALBcJ_P0025130 Gopc protein_coding unknown_likely_coding MGP_BALBcJ_T0027517.1 MGP_BALBcJ_G0017834.1 mouse_genomes_project 10 127872858 127874545 - MGP_BALBcJ_P0027517 Olfr765 protein_coding protein_coding MGP_BALBcJ_T0006141.1 MGP_BALBcJ_G0005129.1 mouse_genomes_project 10 127788491 127794764 + 9030616G12Rik lincRNA lincRNA MGP_BALBcJ_T0027039.1 MGP_BALBcJ_G0017667.1 mouse_genomes_project 10 110595566 110624920 + MGP_BALBcJ_P0027039 Glipr1l2 protein_coding protein_coding MGP_BALBcJ_T0027040.1 MGP_BALBcJ_G0017667.1 mouse_genomes_project 10 110595566 110625707 + MGP_BALBcJ_P0027040 Glipr1l2 protein_coding protein_coding MGP_BALBcJ_T0025291.1 MGP_BALBcJ_G0017210.1 mouse_genomes_project 10 58332981 58405584 - MGP_BALBcJ_P0025291 Unc5b protein_coding protein_coding MGP_BALBcJ_T0027593.1 MGP_BALBcJ_G0017891.1 mouse_genomes_project 10 129463334 129482929 - MGP_BALBcJ_P0027593 Vmn2r86 protein_coding protein_coding MGP_BALBcJ_T0024748.1 MGP_BALBcJ_G0017030.1 mouse_genomes_project 10 21541227 21581694 + MGP_BALBcJ_P0024748 Stx7 protein_coding unknown_likely_coding MGP_BALBcJ_T0024706.1 MGP_BALBcJ_G0017000.1 mouse_genomes_project 10 19171169 19176228 - MGP_BALBcJ_P0024706 protein_coding protein_coding MGP_BALBcJ_T0098302.1 MGP_BALBcJ_G0036356.1 mouse_genomes_project 10 61674959 61675324 + pseudogene pseudogene MGP_BALBcJ_T0025877.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75774891 75831554 - MGP_BALBcJ_P0025877 Trpm2 protein_coding protein_coding MGP_BALBcJ_T0025878.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75776358 75829273 - Trpm2 protein_coding processed_transcript MGP_BALBcJ_T0025879.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75776496 75798959 - Trpm2 protein_coding retained_intron MGP_BALBcJ_T0025880.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75776554 75800385 - Trpm2 protein_coding retained_intron MGP_BALBcJ_T0025881.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75783251 75788004 - Trpm2 protein_coding retained_intron MGP_BALBcJ_T0025882.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75784482 75805405 - Trpm2 protein_coding retained_intron MGP_BALBcJ_T0025883.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75824605 75831504 - MGP_BALBcJ_P0025883 Trpm2 protein_coding protein_coding MGP_BALBcJ_T0025884.1 MGP_BALBcJ_G0017351.1 mouse_genomes_project 10 75828860 75832263 - Trpm2 protein_coding processed_transcript MGP_BALBcJ_T0006068.1 MGP_BALBcJ_G0005082.1 mouse_genomes_project 10 55290414 55298383 - 4930467K11Rik lincRNA lincRNA MGP_BALBcJ_T0000810.1 MGP_BALBcJ_G0000743.1 mouse_genomes_project 10 37795245 37798470 - TEC TEC MGP_BALBcJ_T0025201.1 MGP_BALBcJ_G0017187.1 mouse_genomes_project 10 56125445 56200639 - MGP_BALBcJ_P0025201 Edar protein_coding protein_coding MGP_BALBcJ_T0099176.1 MGP_BALBcJ_G0037212.1 mouse_genomes_project 10 28391185 28391292 - Gm24168 snRNA snRNA MGP_BALBcJ_T0012370.1 MGP_BALBcJ_G0010467.1 mouse_genomes_project 10 21430328 21430943 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006075.1 MGP_BALBcJ_G0005089.1 mouse_genomes_project 10 63814136 63951443 - 1700023F02Rik lincRNA lincRNA MGP_BALBcJ_T0006076.1 MGP_BALBcJ_G0005089.1 mouse_genomes_project 10 63814136 63817583 - 1700023F02Rik lincRNA lincRNA MGP_BALBcJ_T0006077.1 MGP_BALBcJ_G0005089.1 mouse_genomes_project 10 63814140 63817604 - 1700023F02Rik lincRNA lincRNA MGP_BALBcJ_T0006078.1 MGP_BALBcJ_G0005089.1 mouse_genomes_project 10 63814140 63817597 - 1700023F02Rik lincRNA lincRNA MGP_BALBcJ_T0006079.1 MGP_BALBcJ_G0005089.1 mouse_genomes_project 10 63814207 63816609 - 1700023F02Rik lincRNA lincRNA MGP_BALBcJ_T0100447.1 MGP_BALBcJ_G0038483.1 mouse_genomes_project 10 64175416 64175546 + Gm22594 snoRNA snoRNA MGP_BALBcJ_T0024552.1 MGP_BALBcJ_G0016957.1 mouse_genomes_project 10 10207880 10328553 - MGP_BALBcJ_P0024552 Phactr2 protein_coding protein_coding MGP_BALBcJ_T0024553.1 MGP_BALBcJ_G0016957.1 mouse_genomes_project 10 10213520 10393116 - MGP_BALBcJ_P0024553 Phactr2 protein_coding protein_coding MGP_BALBcJ_T0024554.1 MGP_BALBcJ_G0016957.1 mouse_genomes_project 10 10213520 10498182 - MGP_BALBcJ_P0024554 Phactr2 protein_coding protein_coding MGP_BALBcJ_T0024555.1 MGP_BALBcJ_G0016957.1 mouse_genomes_project 10 10213522 10328682 - MGP_BALBcJ_P0024555 Phactr2 protein_coding protein_coding MGP_BALBcJ_T0024556.1 MGP_BALBcJ_G0016957.1 mouse_genomes_project 10 10214383 10393333 - MGP_BALBcJ_P0024556 Phactr2 protein_coding protein_coding MGP_BALBcJ_T0024557.1 MGP_BALBcJ_G0016957.1 mouse_genomes_project 10 10385761 10393094 - Phactr2 protein_coding processed_transcript MGP_BALBcJ_T0003047.1 MGP_BALBcJ_G0002845.1 mouse_genomes_project 10 79433730 79435735 + Gm16104 antisense antisense MGP_BALBcJ_T0100422.1 MGP_BALBcJ_G0038458.1 mouse_genomes_project 10 12046354 12047387 + Gm23892 snoRNA snoRNA MGP_BALBcJ_T0027549.1 MGP_BALBcJ_G0017858.1 mouse_genomes_project 10 128516203 128517136 - MGP_BALBcJ_P0027549 Olfr796 protein_coding protein_coding MGP_BALBcJ_T0027550.1 MGP_BALBcJ_G0017858.1 mouse_genomes_project 10 128516203 128520752 - MGP_BALBcJ_P0027550 Olfr796 protein_coding protein_coding MGP_BALBcJ_T0024614.1 MGP_BALBcJ_G0016973.1 mouse_genomes_project 10 15347322 15366251 - MGP_BALBcJ_P0024614 Ccdc28a protein_coding protein_coding MGP_BALBcJ_T0024615.1 MGP_BALBcJ_G0016973.1 mouse_genomes_project 10 15347330 15360927 - MGP_BALBcJ_P0024615 Ccdc28a protein_coding protein_coding MGP_BALBcJ_T0024616.1 MGP_BALBcJ_G0016973.1 mouse_genomes_project 10 15347423 15349976 - Ccdc28a protein_coding retained_intron MGP_BALBcJ_T0024617.1 MGP_BALBcJ_G0016973.1 mouse_genomes_project 10 15347706 15353179 - MGP_BALBcJ_P0024617 Ccdc28a protein_coding protein_coding MGP_BALBcJ_T0024618.1 MGP_BALBcJ_G0016973.1 mouse_genomes_project 10 15350424 15366209 - MGP_BALBcJ_P0024618 Ccdc28a protein_coding protein_coding MGP_BALBcJ_T0099167.1 MGP_BALBcJ_G0037203.1 mouse_genomes_project 10 9358457 9358622 + Gm23680 snRNA snRNA MGP_BALBcJ_T0027249.1 MGP_BALBcJ_G0017739.1 mouse_genomes_project 10 125782350 125792810 - MGP_BALBcJ_P0027249 Mettl21b protein_coding protein_coding MGP_BALBcJ_T0025203.1 MGP_BALBcJ_G0017189.1 mouse_genomes_project 10 56238605 56243210 - MGP_BALBcJ_P0025203 Gm17542 protein_coding protein_coding MGP_BALBcJ_T0012418.1 MGP_BALBcJ_G0010515.1 mouse_genomes_project 10 116199561 116207212 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025948.1 MGP_BALBcJ_G0017371.1 mouse_genomes_project 10 76712721 76713684 - MGP_BALBcJ_P0025948 Olfr1356 protein_coding protein_coding MGP_BALBcJ_T0025949.1 MGP_BALBcJ_G0017371.1 mouse_genomes_project 10 76712721 76721483 - MGP_BALBcJ_P0025949 Olfr1356 protein_coding protein_coding MGP_BALBcJ_T0026456.1 MGP_BALBcJ_G0017504.1 mouse_genomes_project 10 79556985 79575530 - MGP_BALBcJ_P0026456 Gna11 protein_coding protein_coding MGP_BALBcJ_T0026457.1 MGP_BALBcJ_G0017504.1 mouse_genomes_project 10 79558548 79560310 - Gna11 protein_coding retained_intron MGP_BALBcJ_T0026458.1 MGP_BALBcJ_G0017504.1 mouse_genomes_project 10 79563494 79565495 - Gna11 protein_coding retained_intron MGP_BALBcJ_T0017077.1 MGP_BALBcJ_G0015072.1 mouse_genomes_project 10 39161916 39170377 + 5730435O14Rik processed_transcript antisense MGP_BALBcJ_T0017078.1 MGP_BALBcJ_G0015072.1 mouse_genomes_project 10 39169464 39170366 + 5730435O14Rik processed_transcript retained_intron MGP_BALBcJ_T0009571.1 MGP_BALBcJ_G0007696.1 mouse_genomes_project 10 76275099 76275170 - Mir6907 miRNA miRNA MGP_BALBcJ_T0027376.1 MGP_BALBcJ_G0017782.1 mouse_genomes_project 10 126778974 126788768 - MGP_BALBcJ_P0027376 protein_coding protein_coding MGP_BALBcJ_T0024909.1 MGP_BALBcJ_G0017090.1 mouse_genomes_project 10 36674605 36687374 - MGP_BALBcJ_P0024909 Wisp3 protein_coding protein_coding MGP_BALBcJ_T0011267.1 MGP_BALBcJ_G0009392.1 mouse_genomes_project 10 123201068 123201327 + Gm23777 misc_RNA misc_RNA MGP_BALBcJ_T0025865.1 MGP_BALBcJ_G0017341.1 mouse_genomes_project 10 75530082 75530635 + MGP_BALBcJ_P0025865 Gm10024 protein_coding protein_coding MGP_BALBcJ_T0027358.1 MGP_BALBcJ_G0017770.1 mouse_genomes_project 10 126478568 126494063 + MGP_BALBcJ_P0027358 Myo1a protein_coding protein_coding MGP_BALBcJ_T0027359.1 MGP_BALBcJ_G0017770.1 mouse_genomes_project 10 126478654 126505070 + MGP_BALBcJ_P0027359 Myo1a protein_coding unknown_likely_coding MGP_BALBcJ_T0024835.1 MGP_BALBcJ_G0017058.1 mouse_genomes_project 10 28095405 28259045 - MGP_BALBcJ_P0024835 Ncoa7 protein_coding unknown_likely_coding MGP_BALBcJ_T0024836.1 MGP_BALBcJ_G0017058.1 mouse_genomes_project 10 28095406 28105690 - MGP_BALBcJ_P0024836 Ncoa7 protein_coding protein_coding MGP_BALBcJ_T0024837.1 MGP_BALBcJ_G0017058.1 mouse_genomes_project 10 28095406 28259255 - MGP_BALBcJ_P0024837 Ncoa7 protein_coding protein_coding MGP_BALBcJ_T0000815.1 MGP_BALBcJ_G0000748.1 mouse_genomes_project 10 78510245 78511100 + TEC TEC MGP_BALBcJ_T0024462.1 MGP_BALBcJ_G0016935.1 mouse_genomes_project 10 4719203 4732242 - MGP_BALBcJ_P0024462 Ginm1 protein_coding protein_coding MGP_BALBcJ_T0024463.1 MGP_BALBcJ_G0016935.1 mouse_genomes_project 10 4719206 4721829 - Ginm1 protein_coding retained_intron MGP_BALBcJ_T0024464.1 MGP_BALBcJ_G0016935.1 mouse_genomes_project 10 4719212 4732216 - MGP_BALBcJ_P0024464 Ginm1 protein_coding protein_coding MGP_BALBcJ_T0024465.1 MGP_BALBcJ_G0016935.1 mouse_genomes_project 10 4730623 4744267 - Ginm1 protein_coding processed_transcript MGP_BALBcJ_T0024466.1 MGP_BALBcJ_G0016935.1 mouse_genomes_project 10 4742885 4744291 - Ginm1 protein_coding processed_transcript MGP_BALBcJ_T0024467.1 MGP_BALBcJ_G0016935.1 mouse_genomes_project 10 4743989 4744289 - MGP_BALBcJ_P0024467 Ginm1 protein_coding protein_coding MGP_BALBcJ_T0026997.1 MGP_BALBcJ_G0017654.1 mouse_genomes_project 10 106800189 106884426 + MGP_BALBcJ_P0026997 Pawr protein_coding protein_coding MGP_BALBcJ_T0009598.1 MGP_BALBcJ_G0007723.1 mouse_genomes_project 10 95886992 95887077 + Mir3966 miRNA miRNA MGP_BALBcJ_T0025572.1 MGP_BALBcJ_G0017273.1 mouse_genomes_project 10 67837548 67934285 + MGP_BALBcJ_P0025572 Ccdc6 protein_coding protein_coding MGP_BALBcJ_T0025573.1 MGP_BALBcJ_G0017273.1 mouse_genomes_project 10 67915702 67923316 + Ccdc6 protein_coding retained_intron MGP_BALBcJ_T0025574.1 MGP_BALBcJ_G0017273.1 mouse_genomes_project 10 67916204 67929267 + MGP_BALBcJ_P0025574 Ccdc6 protein_coding protein_coding MGP_BALBcJ_T0025575.1 MGP_BALBcJ_G0017273.1 mouse_genomes_project 10 67916240 67929281 + MGP_BALBcJ_P0025575 Ccdc6 protein_coding protein_coding MGP_BALBcJ_T0026443.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79514729 79524873 - MGP_BALBcJ_P0026443 Ncln protein_coding protein_coding MGP_BALBcJ_T0026444.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79514937 79524807 - MGP_BALBcJ_P0026444 Ncln protein_coding protein_coding MGP_BALBcJ_T0026445.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79515578 79516878 - Ncln protein_coding retained_intron MGP_BALBcJ_T0026446.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79515770 79516698 - MGP_BALBcJ_P0026446 Ncln protein_coding protein_coding MGP_BALBcJ_T0026447.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79515820 79517124 - Ncln protein_coding retained_intron MGP_BALBcJ_T0026448.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79515860 79517122 - Ncln protein_coding retained_intron MGP_BALBcJ_T0026449.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79516706 79518749 - Ncln protein_coding retained_intron MGP_BALBcJ_T0026450.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79519405 79520536 - Ncln protein_coding retained_intron MGP_BALBcJ_T0026451.1 MGP_BALBcJ_G0017501.1 mouse_genomes_project 10 79521803 79524823 - Ncln protein_coding retained_intron MGP_BALBcJ_T0012399.1 MGP_BALBcJ_G0010496.1 mouse_genomes_project 10 70940455 70941527 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009552.1 MGP_BALBcJ_G0007677.1 mouse_genomes_project 10 39266427 39266482 + Mir3473b miRNA miRNA MGP_BALBcJ_T0026615.1 MGP_BALBcJ_G0017548.1 mouse_genomes_project 10 84215510 84235243 - MGP_BALBcJ_P0026615 Rtcb protein_coding protein_coding MGP_BALBcJ_T0026616.1 MGP_BALBcJ_G0017548.1 mouse_genomes_project 10 84225701 84233559 - Rtcb protein_coding retained_intron MGP_BALBcJ_T0025885.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75840112 75847043 + MGP_BALBcJ_P0025885 1810043G02Rik protein_coding protein_coding MGP_BALBcJ_T0025886.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75840242 75846864 + 1810043G02Rik protein_coding retained_intron MGP_BALBcJ_T0025887.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75840259 75847043 + 1810043G02Rik protein_coding retained_intron MGP_BALBcJ_T0025888.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75840261 75848514 + MGP_BALBcJ_P0025888 1810043G02Rik protein_coding protein_coding MGP_BALBcJ_T0025889.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75840269 75847045 + 1810043G02Rik protein_coding retained_intron MGP_BALBcJ_T0025890.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75840281 75842111 + 1810043G02Rik protein_coding processed_transcript MGP_BALBcJ_T0025891.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75842081 75846088 + 1810043G02Rik protein_coding processed_transcript MGP_BALBcJ_T0025892.1 MGP_BALBcJ_G0017352.1 mouse_genomes_project 10 75843366 75844499 + 1810043G02Rik protein_coding processed_transcript MGP_BALBcJ_T0012362.1 MGP_BALBcJ_G0010459.1 mouse_genomes_project 10 17643372 17645097 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026819.1 MGP_BALBcJ_G0017590.1 mouse_genomes_project 10 91532878 91614537 + MGP_BALBcJ_P0026819 Cdk17 protein_coding protein_coding MGP_BALBcJ_T0100439.1 MGP_BALBcJ_G0038475.1 mouse_genomes_project 10 44353147 44353278 - Gm23481 snoRNA snoRNA MGP_BALBcJ_T0026091.1 MGP_BALBcJ_G0017417.1 mouse_genomes_project 10 77980074 77999153 + MGP_BALBcJ_P0026091 Abca7 protein_coding protein_coding MGP_BALBcJ_T0026092.1 MGP_BALBcJ_G0017417.1 mouse_genomes_project 10 77981156 77999134 + MGP_BALBcJ_P0026092 Abca7 protein_coding protein_coding MGP_BALBcJ_T0026093.1 MGP_BALBcJ_G0017417.1 mouse_genomes_project 10 77981195 77999149 + MGP_BALBcJ_P0026093 Abca7 protein_coding protein_coding MGP_BALBcJ_T0024813.1 MGP_BALBcJ_G0017048.1 mouse_genomes_project 10 26398296 26411947 - MGP_BALBcJ_P0024813 2310057J18Rik protein_coding protein_coding MGP_BALBcJ_T0024814.1 MGP_BALBcJ_G0017048.1 mouse_genomes_project 10 26398372 26412856 - MGP_BALBcJ_P0024814 2310057J18Rik protein_coding protein_coding MGP_BALBcJ_T0024815.1 MGP_BALBcJ_G0017048.1 mouse_genomes_project 10 26398374 26400198 - 2310057J18Rik protein_coding retained_intron MGP_BALBcJ_T0024816.1 MGP_BALBcJ_G0017048.1 mouse_genomes_project 10 26398374 26412866 - MGP_BALBcJ_P0024816 2310057J18Rik protein_coding protein_coding MGP_BALBcJ_T0026394.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369697 79374130 - MGP_BALBcJ_P0026394 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026395.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369700 79374019 - Hmg20b protein_coding retained_intron MGP_BALBcJ_T0026396.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369700 79374076 - MGP_BALBcJ_P0026396 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026397.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369700 79374074 - MGP_BALBcJ_P0026397 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026398.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369700 79373841 - MGP_BALBcJ_P0026398 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026399.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369701 79370380 - Hmg20b protein_coding retained_intron MGP_BALBcJ_T0026400.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79369701 79373977 - MGP_BALBcJ_P0026400 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026401.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79370408 79372735 - MGP_BALBcJ_P0026401 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026402.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79370646 79374093 - MGP_BALBcJ_P0026402 Hmg20b protein_coding protein_coding MGP_BALBcJ_T0026403.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79370647 79371572 - Hmg20b protein_coding retained_intron MGP_BALBcJ_T0026404.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79372653 79373969 - Hmg20b protein_coding processed_transcript MGP_BALBcJ_T0026405.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79372695 79373967 - Hmg20b protein_coding retained_intron MGP_BALBcJ_T0026406.1 MGP_BALBcJ_G0017493.1 mouse_genomes_project 10 79372705 79374094 - Hmg20b protein_coding processed_transcript MGP_BALBcJ_T0009559.1 MGP_BALBcJ_G0007684.1 mouse_genomes_project 10 57686022 57686080 + Mir6906 miRNA miRNA MGP_BALBcJ_T0025078.1 MGP_BALBcJ_G0017140.1 mouse_genomes_project 10 41900459 41910174 + MGP_BALBcJ_P0025078 protein_coding protein_coding MGP_BALBcJ_T0099180.1 MGP_BALBcJ_G0037216.1 mouse_genomes_project 10 38988461 38988568 + Gm25626 snRNA snRNA MGP_BALBcJ_T0027527.1 MGP_BALBcJ_G0017841.1 mouse_genomes_project 10 128082020 128084788 + MGP_BALBcJ_P0027527 Olfr774 protein_coding protein_coding MGP_BALBcJ_T0027528.1 MGP_BALBcJ_G0017841.1 mouse_genomes_project 10 128083863 128084782 + MGP_BALBcJ_P0027528 Olfr774 protein_coding protein_coding MGP_BALBcJ_T0025210.1 MGP_BALBcJ_G0017192.1 mouse_genomes_project 10 56742670 56747152 + MGP_BALBcJ_P0025210 Sowahc protein_coding protein_coding MGP_BALBcJ_T0024629.1 MGP_BALBcJ_G0016977.1 mouse_genomes_project 10 15906635 15912829 - MGP_BALBcJ_P0024629 Gm4922 protein_coding protein_coding MGP_BALBcJ_T0025772.1 MGP_BALBcJ_G0017318.1 mouse_genomes_project 10 74146209 74238369 - MGP_BALBcJ_P0025772 Pcnt protein_coding protein_coding MGP_BALBcJ_T0025773.1 MGP_BALBcJ_G0017318.1 mouse_genomes_project 10 74146213 74238211 - MGP_BALBcJ_P0025773 Pcnt protein_coding unknown_likely_coding MGP_BALBcJ_T0024673.1 MGP_BALBcJ_G0016991.1 mouse_genomes_project 10 17471569 17485013 + MGP_BALBcJ_P0024673 Mtfr2 protein_coding protein_coding MGP_BALBcJ_T0025897.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894190 75909416 - MGP_BALBcJ_P0025897 Aire protein_coding protein_coding MGP_BALBcJ_T0025898.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894190 75909416 - MGP_BALBcJ_P0025898 Aire protein_coding protein_coding MGP_BALBcJ_T0025899.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894190 75909416 - MGP_BALBcJ_P0025899 Aire protein_coding protein_coding MGP_BALBcJ_T0025900.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894191 75904100 - Aire protein_coding retained_intron MGP_BALBcJ_T0025901.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894191 75909446 - MGP_BALBcJ_P0025901 Aire protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025902.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025902 Aire protein_coding protein_coding MGP_BALBcJ_T0025903.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025903 Aire protein_coding protein_coding MGP_BALBcJ_T0025904.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025904 Aire protein_coding protein_coding MGP_BALBcJ_T0025905.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025905 Aire protein_coding protein_coding MGP_BALBcJ_T0025906.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025906 Aire protein_coding protein_coding MGP_BALBcJ_T0025907.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025907 Aire protein_coding protein_coding MGP_BALBcJ_T0025908.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894199 75909416 - MGP_BALBcJ_P0025908 Aire protein_coding protein_coding MGP_BALBcJ_T0025909.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894239 75909416 - MGP_BALBcJ_P0025909 Aire protein_coding protein_coding MGP_BALBcJ_T0025910.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75894239 75909408 - MGP_BALBcJ_P0025910 Aire protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025911.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75896331 75904102 - Aire protein_coding retained_intron MGP_BALBcJ_T0025912.1 MGP_BALBcJ_G0017354.1 mouse_genomes_project 10 75902198 75907553 - Aire protein_coding retained_intron MGP_BALBcJ_T0026104.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78031205 78040387 + Gpx4 protein_coding processed_transcript MGP_BALBcJ_T0026105.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78037435 78040387 + MGP_BALBcJ_P0026105 Gpx4 protein_coding protein_coding MGP_BALBcJ_T0026106.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78037982 78039055 + Gpx4 protein_coding processed_transcript MGP_BALBcJ_T0026107.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78037984 78040387 + MGP_BALBcJ_P0026107 Gpx4 protein_coding protein_coding MGP_BALBcJ_T0026108.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78038412 78040342 + MGP_BALBcJ_P0026108 Gpx4 protein_coding protein_coding MGP_BALBcJ_T0026109.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78039841 78040313 + Gpx4 protein_coding retained_intron MGP_BALBcJ_T0026110.1 MGP_BALBcJ_G0017420.1 mouse_genomes_project 10 78039945 78040311 + Gpx4 protein_coding retained_intron MGP_BALBcJ_T0000332.1 MGP_BALBcJ_G0000273.1 mouse_genomes_project 10 83248498 83248566 + mt-Tp Mt_tRNA Mt_tRNA MGP_BALBcJ_T0027398.1 MGP_BALBcJ_G0017788.1 mouse_genomes_project 10 126924572 126971139 - MGP_BALBcJ_P0027398 Rbms2 protein_coding protein_coding MGP_BALBcJ_T0024356.1 MGP_BALBcJ_G0016915.1 mouse_genomes_project 10 1327577 1334887 + MGP_BALBcJ_P0024356 Armt1 protein_coding protein_coding MGP_BALBcJ_T0024357.1 MGP_BALBcJ_G0016915.1 mouse_genomes_project 10 1327584 1341620 + Armt1 protein_coding processed_transcript MGP_BALBcJ_T0024358.1 MGP_BALBcJ_G0016915.1 mouse_genomes_project 10 1327592 1330057 + Armt1 protein_coding retained_intron MGP_BALBcJ_T0024359.1 MGP_BALBcJ_G0016915.1 mouse_genomes_project 10 1327597 1345133 + MGP_BALBcJ_P0024359 Armt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024360.1 MGP_BALBcJ_G0016915.1 mouse_genomes_project 10 1327628 1346323 + MGP_BALBcJ_P0024360 Armt1 protein_coding protein_coding MGP_BALBcJ_T0024361.1 MGP_BALBcJ_G0016915.1 mouse_genomes_project 10 1329463 1335442 + Armt1 protein_coding processed_transcript MGP_BALBcJ_T0009557.1 MGP_BALBcJ_G0007682.1 mouse_genomes_project 10 49772243 49772380 + Gm24084 miRNA miRNA MGP_BALBcJ_T0006096.1 MGP_BALBcJ_G0005103.1 mouse_genomes_project 10 82842847 82846100 - Gm17249 lincRNA lincRNA MGP_BALBcJ_T0006131.1 MGP_BALBcJ_G0005122.1 mouse_genomes_project 10 115558530 115561220 + D630029K05Rik lincRNA lincRNA MGP_BALBcJ_T0006132.1 MGP_BALBcJ_G0005122.1 mouse_genomes_project 10 115558563 115561406 + D630029K05Rik lincRNA lincRNA MGP_BALBcJ_T0006133.1 MGP_BALBcJ_G0005122.1 mouse_genomes_project 10 115559578 115561536 + D630029K05Rik lincRNA lincRNA MGP_BALBcJ_T0006134.1 MGP_BALBcJ_G0005122.1 mouse_genomes_project 10 115560097 115562929 + D630029K05Rik lincRNA lincRNA MGP_BALBcJ_T0024479.1 MGP_BALBcJ_G0016940.1 mouse_genomes_project 10 5641825 5813961 - MGP_BALBcJ_P0024479 Sash1 protein_coding protein_coding MGP_BALBcJ_T0098811.1 MGP_BALBcJ_G0036864.1 mouse_genomes_project 10 71219952 71250295 + Gm15397 sense_intronic sense_intronic MGP_BALBcJ_T0101837.1 MGP_BALBcJ_G0039762.1 mouse_genomes_project 10 126605920 126625240 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101838.1 MGP_BALBcJ_G0039762.1 mouse_genomes_project 10 126605920 126625245 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0003065.1 MGP_BALBcJ_G0002859.1 mouse_genomes_project 10 92961510 93007309 - Tmcc3os antisense antisense MGP_BALBcJ_T0027196.1 MGP_BALBcJ_G0017723.1 mouse_genomes_project 10 120278359 120345535 - MGP_BALBcJ_P0027196 Xpot protein_coding unknown_likely_coding MGP_BALBcJ_T0027197.1 MGP_BALBcJ_G0017723.1 mouse_genomes_project 10 120278366 120345615 - MGP_BALBcJ_P0027197 Xpot protein_coding protein_coding MGP_BALBcJ_T0003015.1 MGP_BALBcJ_G0002820.1 mouse_genomes_project 10 57338945 57339977 - Gm17059 antisense antisense MGP_BALBcJ_T0027052.1 MGP_BALBcJ_G0017675.1 mouse_genomes_project 10 113910154 113932314 - MGP_BALBcJ_P0027052 Tmem19 protein_coding protein_coding MGP_BALBcJ_T0026157.1 MGP_BALBcJ_G0017428.1 mouse_genomes_project 10 78165465 78176003 + MGP_BALBcJ_P0026157 Efna2 protein_coding protein_coding MGP_BALBcJ_T0102117.1 MGP_BALBcJ_G0039934.1 mouse_genomes_project 10 104016326 104016510 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0027187.1 MGP_BALBcJ_G0017717.1 mouse_genomes_project 10 119601442 119659212 - MGP_BALBcJ_P0027187 Lemd3 protein_coding protein_coding MGP_BALBcJ_T0027188.1 MGP_BALBcJ_G0017717.1 mouse_genomes_project 10 119601881 119659212 - MGP_BALBcJ_P0027188 Lemd3 protein_coding protein_coding MGP_BALBcJ_T0024342.1 MGP_BALBcJ_G0016911.1 mouse_genomes_project 10 852174 1039314 + MGP_BALBcJ_P0024342 Mthfd1l protein_coding protein_coding MGP_BALBcJ_T0024343.1 MGP_BALBcJ_G0016911.1 mouse_genomes_project 10 852187 1050347 + MGP_BALBcJ_P0024343 Mthfd1l protein_coding protein_coding MGP_BALBcJ_T0024344.1 MGP_BALBcJ_G0016911.1 mouse_genomes_project 10 852200 1039314 + MGP_BALBcJ_P0024344 Mthfd1l protein_coding protein_coding MGP_BALBcJ_T0024345.1 MGP_BALBcJ_G0016911.1 mouse_genomes_project 10 911883 929331 + Mthfd1l protein_coding processed_transcript MGP_BALBcJ_T0024754.1 MGP_BALBcJ_G0017033.1 mouse_genomes_project 10 22055330 22125919 - MGP_BALBcJ_P0024754 Enpp1 protein_coding protein_coding MGP_BALBcJ_T0024755.1 MGP_BALBcJ_G0017033.1 mouse_genomes_project 10 22058851 22125920 - MGP_BALBcJ_P0024755 Enpp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024756.1 MGP_BALBcJ_G0017033.1 mouse_genomes_project 10 22059222 22125752 - MGP_BALBcJ_P0024756 Enpp1 protein_coding protein_coding MGP_BALBcJ_T0024757.1 MGP_BALBcJ_G0017033.1 mouse_genomes_project 10 22065288 22125758 - Enpp1 protein_coding retained_intron MGP_BALBcJ_T0024758.1 MGP_BALBcJ_G0017033.1 mouse_genomes_project 10 22086853 22092640 - Enpp1 protein_coding retained_intron MGP_BALBcJ_T0025055.1 MGP_BALBcJ_G0017130.1 mouse_genomes_project 10 40804266 40806114 + MGP_BALBcJ_P0025055 9030612E09Rik protein_coding protein_coding MGP_BALBcJ_T0003048.1 MGP_BALBcJ_G0002846.1 mouse_genomes_project 10 79488100 79489914 + Gm16105 antisense antisense MGP_BALBcJ_T0026004.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715507 77725927 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026005.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715511 77718795 - MGP_BALBcJ_P0026005 Polrmt protein_coding protein_coding MGP_BALBcJ_T0026006.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715512 77725927 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026007.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715513 77716204 - Polrmt protein_coding processed_transcript MGP_BALBcJ_T0026008.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715514 77725935 - MGP_BALBcJ_P0026008 Polrmt protein_coding protein_coding MGP_BALBcJ_T0026009.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715514 77725933 - MGP_BALBcJ_P0026009 Polrmt protein_coding protein_coding MGP_BALBcJ_T0026010.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715556 77716189 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026011.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715557 77717134 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026012.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715558 77725925 - MGP_BALBcJ_P0026012 Polrmt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026013.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715591 77717107 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026014.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77715961 77718052 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026015.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77717508 77718796 - Polrmt protein_coding retained_intron MGP_BALBcJ_T0026016.1 MGP_BALBcJ_G0017396.1 mouse_genomes_project 10 77723087 77725927 - Polrmt protein_coding processed_transcript MGP_BALBcJ_T0011262.1 MGP_BALBcJ_G0009387.1 mouse_genomes_project 10 93346539 93346843 + Gm25266 misc_RNA misc_RNA MGP_BALBcJ_T0100421.1 MGP_BALBcJ_G0038457.1 mouse_genomes_project 10 11268741 11268852 + Gm24343 snoRNA snoRNA MGP_BALBcJ_T0012397.1 MGP_BALBcJ_G0010494.1 mouse_genomes_project 10 64985748 65003461 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000811.1 MGP_BALBcJ_G0000744.1 mouse_genomes_project 10 60769136 60769478 + TEC TEC MGP_BALBcJ_T0102126.1 MGP_BALBcJ_G0039943.1 mouse_genomes_project 10 128855787 128857530 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102128.1 MGP_BALBcJ_G0039945.1 mouse_genomes_project 10 129034206 129034958 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0027439.1 MGP_BALBcJ_G0017802.1 mouse_genomes_project 10 127205308 127210604 - MGP_BALBcJ_P0027439 Slc39a5 protein_coding protein_coding MGP_BALBcJ_T0027440.1 MGP_BALBcJ_G0017802.1 mouse_genomes_project 10 127205308 127209844 - MGP_BALBcJ_P0027440 Slc39a5 protein_coding protein_coding MGP_BALBcJ_T0026224.1 MGP_BALBcJ_G0017442.1 mouse_genomes_project 10 78403000 78406770 - Uqcr11 protein_coding processed_transcript MGP_BALBcJ_T0026225.1 MGP_BALBcJ_G0017442.1 mouse_genomes_project 10 78403000 78406834 - MGP_BALBcJ_P0026225 Uqcr11 protein_coding protein_coding MGP_BALBcJ_T0026226.1 MGP_BALBcJ_G0017442.1 mouse_genomes_project 10 78403001 78406799 - Uqcr11 protein_coding processed_transcript MGP_BALBcJ_T0027499.1 MGP_BALBcJ_G0017827.1 mouse_genomes_project 10 127725675 127729571 + MGP_BALBcJ_P0027499 Cd63 protein_coding protein_coding MGP_BALBcJ_T0027500.1 MGP_BALBcJ_G0017827.1 mouse_genomes_project 10 127726622 127729571 + MGP_BALBcJ_P0027500 Cd63 protein_coding protein_coding MGP_BALBcJ_T0025077.1 MGP_BALBcJ_G0017139.1 mouse_genomes_project 10 41900440 41914271 + MGP_BALBcJ_P0025077 protein_coding protein_coding MGP_BALBcJ_T0027020.1 MGP_BALBcJ_G0017658.1 mouse_genomes_project 10 109392380 109411533 + MGP_BALBcJ_P0027020 Csrp2 protein_coding protein_coding MGP_BALBcJ_T0024600.1 MGP_BALBcJ_G0016968.1 mouse_genomes_project 10 14912550 14924206 + Txlnb protein_coding retained_intron MGP_BALBcJ_T0024601.1 MGP_BALBcJ_G0016968.1 mouse_genomes_project 10 14912580 14960246 + MGP_BALBcJ_P0024601 Txlnb protein_coding protein_coding MGP_BALBcJ_T0100426.1 MGP_BALBcJ_G0038462.1 mouse_genomes_project 10 21166323 21166397 - Gm23130 snoRNA snoRNA MGP_BALBcJ_T0026668.1 MGP_BALBcJ_G0017563.1 mouse_genomes_project 10 86436918 86438222 + MGP_BALBcJ_P0026668 Pmch protein_coding protein_coding MGP_BALBcJ_T0026949.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100135874 100487665 + Mgat4c protein_coding retained_intron MGP_BALBcJ_T0026950.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100135874 100878607 + MGP_BALBcJ_P0026950 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026951.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100136028 100864897 + Mgat4c protein_coding processed_transcript MGP_BALBcJ_T0026952.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100136028 100865517 + MGP_BALBcJ_P0026952 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026953.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100136133 100871761 + MGP_BALBcJ_P0026953 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026954.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100646718 100875517 + MGP_BALBcJ_P0026954 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026955.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100646718 100878610 + MGP_BALBcJ_P0026955 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026956.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100646738 100764655 + Mgat4c protein_coding processed_transcript MGP_BALBcJ_T0026957.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100646749 100865444 + MGP_BALBcJ_P0026957 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026958.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100646765 100764656 + Mgat4c protein_coding processed_transcript MGP_BALBcJ_T0026959.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100646939 100878610 + MGP_BALBcJ_P0026959 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0026960.1 MGP_BALBcJ_G0017637.1 mouse_genomes_project 10 100861689 100877454 + MGP_BALBcJ_P0026960 Mgat4c protein_coding protein_coding MGP_BALBcJ_T0024948.1 MGP_BALBcJ_G0017102.1 mouse_genomes_project 10 37928624 38064085 + MGP_BALBcJ_P0024948 Cdk19 protein_coding protein_coding MGP_BALBcJ_T0024949.1 MGP_BALBcJ_G0017102.1 mouse_genomes_project 10 37928624 38064085 + MGP_BALBcJ_P0024949 Cdk19 protein_coding protein_coding MGP_BALBcJ_T0026734.1 MGP_BALBcJ_G0017578.1 mouse_genomes_project 10 87795865 87848113 - MGP_BALBcJ_P0026734 Nr1h4 protein_coding protein_coding MGP_BALBcJ_T0026735.1 MGP_BALBcJ_G0017578.1 mouse_genomes_project 10 87795865 87848104 - MGP_BALBcJ_P0026735 Nr1h4 protein_coding protein_coding MGP_BALBcJ_T0026736.1 MGP_BALBcJ_G0017578.1 mouse_genomes_project 10 87796004 87876217 - MGP_BALBcJ_P0026736 Nr1h4 protein_coding protein_coding MGP_BALBcJ_T0027164.1 MGP_BALBcJ_G0017710.1 mouse_genomes_project 10 118736999 118766246 - MGP_BALBcJ_P0027164 Helb protein_coding protein_coding MGP_BALBcJ_T0027165.1 MGP_BALBcJ_G0017710.1 mouse_genomes_project 10 118738099 118745594 - Helb protein_coding retained_intron MGP_BALBcJ_T0027166.1 MGP_BALBcJ_G0017710.1 mouse_genomes_project 10 118738161 118766124 - MGP_BALBcJ_P0027166 Helb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027581.1 MGP_BALBcJ_G0017881.1 mouse_genomes_project 10 128975741 128980008 + MGP_BALBcJ_P0027581 Olfr821 protein_coding protein_coding MGP_BALBcJ_T0027582.1 MGP_BALBcJ_G0017881.1 mouse_genomes_project 10 128979075 128980008 + MGP_BALBcJ_P0027582 Olfr821 protein_coding protein_coding MGP_BALBcJ_T0026739.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 87989181 88038327 - MGP_BALBcJ_P0026739 Scyl2 protein_coding protein_coding MGP_BALBcJ_T0026740.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 87990073 88005342 - Scyl2 protein_coding processed_transcript MGP_BALBcJ_T0026741.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 87990356 88038310 - MGP_BALBcJ_P0026741 Scyl2 protein_coding protein_coding MGP_BALBcJ_T0026742.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 88000622 88005046 - Scyl2 protein_coding retained_intron MGP_BALBcJ_T0026743.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 88001620 88011439 - MGP_BALBcJ_P0026743 Scyl2 protein_coding protein_coding MGP_BALBcJ_T0026744.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 88018654 88038310 - Scyl2 protein_coding retained_intron MGP_BALBcJ_T0026745.1 MGP_BALBcJ_G0017580.1 mouse_genomes_project 10 88026956 88038305 - Scyl2 protein_coding retained_intron MGP_BALBcJ_T0027344.1 MGP_BALBcJ_G0017767.1 mouse_genomes_project 10 126415176 126434182 + MGP_BALBcJ_P0027344 Stat6 protein_coding protein_coding MGP_BALBcJ_T0027345.1 MGP_BALBcJ_G0017767.1 mouse_genomes_project 10 126415192 126422991 + MGP_BALBcJ_P0027345 Stat6 protein_coding protein_coding MGP_BALBcJ_T0027346.1 MGP_BALBcJ_G0017767.1 mouse_genomes_project 10 126425302 126428361 + Stat6 protein_coding retained_intron MGP_BALBcJ_T0027347.1 MGP_BALBcJ_G0017767.1 mouse_genomes_project 10 126430122 126431283 + Stat6 protein_coding retained_intron MGP_BALBcJ_T0027348.1 MGP_BALBcJ_G0017767.1 mouse_genomes_project 10 126432624 126433412 + Stat6 protein_coding retained_intron MGP_BALBcJ_T0027561.1 MGP_BALBcJ_G0017866.1 mouse_genomes_project 10 128668101 128669098 - MGP_BALBcJ_P0027561 Olfr807 protein_coding protein_coding MGP_BALBcJ_T0027436.1 MGP_BALBcJ_G0017801.1 mouse_genomes_project 10 127186438 127194871 + Ankrd52 protein_coding retained_intron MGP_BALBcJ_T0027437.1 MGP_BALBcJ_G0017801.1 mouse_genomes_project 10 127186442 127203379 + MGP_BALBcJ_P0027437 Ankrd52 protein_coding protein_coding MGP_BALBcJ_T0027438.1 MGP_BALBcJ_G0017801.1 mouse_genomes_project 10 127198659 127218049 + MGP_BALBcJ_P0027438 Ankrd52 protein_coding protein_coding MGP_BALBcJ_T0027230.1 MGP_BALBcJ_G0017732.1 mouse_genomes_project 10 121985978 122477138 + MGP_BALBcJ_P0027230 Fam19a2 protein_coding protein_coding MGP_BALBcJ_T0026711.1 MGP_BALBcJ_G0017572.1 mouse_genomes_project 10 87018599 87026871 - MGP_BALBcJ_P0026711 Spic protein_coding protein_coding MGP_BALBcJ_T0026712.1 MGP_BALBcJ_G0017572.1 mouse_genomes_project 10 87018916 87026871 - MGP_BALBcJ_P0026712 Spic protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026713.1 MGP_BALBcJ_G0017572.1 mouse_genomes_project 10 87019539 87028554 - MGP_BALBcJ_P0026713 Spic protein_coding protein_coding MGP_BALBcJ_T0026714.1 MGP_BALBcJ_G0017572.1 mouse_genomes_project 10 87021683 87026871 - Spic protein_coding retained_intron MGP_BALBcJ_T0025821.1 MGP_BALBcJ_G0017331.1 mouse_genomes_project 10 75064534 75065982 - MGP_BALBcJ_P0025821 Gm10941 protein_coding protein_coding MGP_BALBcJ_T0098451.1 MGP_BALBcJ_G0036505.1 mouse_genomes_project 10 104303236 104303347 - n-R5s80 rRNA rRNA MGP_BALBcJ_T0025870.1 MGP_BALBcJ_G0017346.1 mouse_genomes_project 10 75609708 75610321 - MGP_BALBcJ_P0025870 protein_coding protein_coding MGP_BALBcJ_T0024724.1 MGP_BALBcJ_G0017011.1 mouse_genomes_project 10 20478195 20727952 - MGP_BALBcJ_P0024724 Eya4 protein_coding protein_coding MGP_BALBcJ_T0024725.1 MGP_BALBcJ_G0017011.1 mouse_genomes_project 10 20478790 20727944 - MGP_BALBcJ_P0024725 Eya4 protein_coding protein_coding MGP_BALBcJ_T0100451.1 MGP_BALBcJ_G0038487.1 mouse_genomes_project 10 75779829 75779905 - Gm22394 snoRNA snoRNA MGP_BALBcJ_T0009592.1 MGP_BALBcJ_G0007717.1 mouse_genomes_project 10 90970845 90970939 + Gm22582 miRNA miRNA MGP_BALBcJ_T0026594.1 MGP_BALBcJ_G0017539.1 mouse_genomes_project 10 83321234 83326711 - MGP_BALBcJ_P0026594 Fhl4 protein_coding protein_coding MGP_BALBcJ_T0025602.1 MGP_BALBcJ_G0017281.1 mouse_genomes_project 10 69070026 69085027 - MGP_BALBcJ_P0025602 Cisd1 protein_coding protein_coding MGP_BALBcJ_T0027372.1 MGP_BALBcJ_G0017781.1 mouse_genomes_project 10 126680977 126694416 + MGP_BALBcJ_P0027372 Sdr9c7 protein_coding protein_coding MGP_BALBcJ_T0027373.1 MGP_BALBcJ_G0017781.1 mouse_genomes_project 10 126681234 126694405 + Sdr9c7 protein_coding processed_transcript MGP_BALBcJ_T0027374.1 MGP_BALBcJ_G0017781.1 mouse_genomes_project 10 126684514 126693041 + Sdr9c7 protein_coding processed_transcript MGP_BALBcJ_T0027375.1 MGP_BALBcJ_G0017781.1 mouse_genomes_project 10 126685866 126692992 + Sdr9c7 protein_coding processed_transcript MGP_BALBcJ_T0027117.1 MGP_BALBcJ_G0017699.1 mouse_genomes_project 10 116248545 116254486 + Cpm protein_coding processed_transcript MGP_BALBcJ_T0027118.1 MGP_BALBcJ_G0017699.1 mouse_genomes_project 10 116248545 116286819 + Cpm protein_coding retained_intron MGP_BALBcJ_T0027119.1 MGP_BALBcJ_G0017699.1 mouse_genomes_project 10 116248545 116305354 + MGP_BALBcJ_P0027119 Cpm protein_coding protein_coding MGP_BALBcJ_T0027120.1 MGP_BALBcJ_G0017699.1 mouse_genomes_project 10 116293923 116302936 + Cpm protein_coding retained_intron MGP_BALBcJ_T0024872.1 MGP_BALBcJ_G0017080.1 mouse_genomes_project 10 31731708 31735587 + MGP_BALBcJ_P0024872 Tspyl4 protein_coding protein_coding MGP_BALBcJ_T0003077.1 MGP_BALBcJ_G0002866.1 mouse_genomes_project 10 118069678 118096460 - Grip1os3 antisense antisense MGP_BALBcJ_T0003078.1 MGP_BALBcJ_G0002866.1 mouse_genomes_project 10 118079532 118097009 - Grip1os3 antisense antisense MGP_BALBcJ_T0003079.1 MGP_BALBcJ_G0002866.1 mouse_genomes_project 10 118079532 118096410 - Grip1os3 antisense antisense MGP_BALBcJ_T0025999.1 MGP_BALBcJ_G0017394.1 mouse_genomes_project 10 77683471 77690990 + MGP_BALBcJ_P0025999 Bsg protein_coding protein_coding MGP_BALBcJ_T0026000.1 MGP_BALBcJ_G0017394.1 mouse_genomes_project 10 77683512 77690908 + MGP_BALBcJ_P0026000 Bsg protein_coding protein_coding MGP_BALBcJ_T0026001.1 MGP_BALBcJ_G0017394.1 mouse_genomes_project 10 77683520 77689741 + Bsg protein_coding processed_transcript MGP_BALBcJ_T0026002.1 MGP_BALBcJ_G0017394.1 mouse_genomes_project 10 77689117 77690723 + Bsg protein_coding retained_intron MGP_BALBcJ_T0025044.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40484608 40584788 + MGP_BALBcJ_P0025044 Scml4 protein_coding protein_coding MGP_BALBcJ_T0025045.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40484765 40554380 + MGP_BALBcJ_P0025045 Scml4 protein_coding protein_coding MGP_BALBcJ_T0025046.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40484889 40558390 + MGP_BALBcJ_P0025046 Scml4 protein_coding protein_coding MGP_BALBcJ_T0025047.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40485015 40584786 + MGP_BALBcJ_P0025047 Scml4 protein_coding protein_coding MGP_BALBcJ_T0025048.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40489736 40554245 + MGP_BALBcJ_P0025048 Scml4 protein_coding protein_coding MGP_BALBcJ_T0025049.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40526540 40559168 + MGP_BALBcJ_P0025049 Scml4 protein_coding protein_coding MGP_BALBcJ_T0025050.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40558366 40582778 + Scml4 protein_coding retained_intron MGP_BALBcJ_T0025051.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40558944 40572228 + Scml4 protein_coding retained_intron MGP_BALBcJ_T0025052.1 MGP_BALBcJ_G0017128.1 mouse_genomes_project 10 40563911 40582729 + Scml4 protein_coding processed_transcript MGP_BALBcJ_T0027101.1 MGP_BALBcJ_G0017691.1 mouse_genomes_project 10 115647972 115660789 - MGP_BALBcJ_P0027101 Cct2 protein_coding protein_coding MGP_BALBcJ_T0011257.1 MGP_BALBcJ_G0009382.1 mouse_genomes_project 10 90478199 90478462 - Gm27588 misc_RNA misc_RNA MGP_BALBcJ_T0025723.1 MGP_BALBcJ_G0017300.1 mouse_genomes_project 10 73546282 73555772 - MGP_BALBcJ_P0025723 Gm20441 protein_coding protein_coding MGP_BALBcJ_T0027255.1 MGP_BALBcJ_G0017741.1 mouse_genomes_project 10 125799900 125804620 + MGP_BALBcJ_P0027255 Cyp27b1 protein_coding protein_coding MGP_BALBcJ_T0027256.1 MGP_BALBcJ_G0017741.1 mouse_genomes_project 10 125799900 125804657 + MGP_BALBcJ_P0027256 Cyp27b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027257.1 MGP_BALBcJ_G0017741.1 mouse_genomes_project 10 125800321 125801517 + Cyp27b1 protein_coding processed_transcript MGP_BALBcJ_T0003059.1 MGP_BALBcJ_G0002855.1 mouse_genomes_project 10 85314244 85372314 + Gm16271 antisense antisense MGP_BALBcJ_T0100441.1 MGP_BALBcJ_G0038477.1 mouse_genomes_project 10 49621508 49621636 + Gm23906 snoRNA snoRNA MGP_BALBcJ_T0006063.1 MGP_BALBcJ_G0005077.1 mouse_genomes_project 10 37429627 37431101 - Gm26824 lincRNA lincRNA MGP_BALBcJ_T0026597.1 MGP_BALBcJ_G0017542.1 mouse_genomes_project 10 83356340 83410884 - MGP_BALBcJ_P0026597 Cry1 protein_coding protein_coding MGP_BALBcJ_T0009591.1 MGP_BALBcJ_G0007716.1 mouse_genomes_project 10 90514687 90514771 - Mir1251 miRNA miRNA MGP_BALBcJ_T0025484.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65254178 65258950 + MGP_BALBcJ_P0025484 Egr2 protein_coding protein_coding MGP_BALBcJ_T0025485.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65254286 65259085 + MGP_BALBcJ_P0025485 Egr2 protein_coding protein_coding MGP_BALBcJ_T0025486.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65256572 65260892 + MGP_BALBcJ_P0025486 Egr2 protein_coding protein_coding MGP_BALBcJ_T0025487.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65256573 65260892 + MGP_BALBcJ_P0025487 Egr2 protein_coding protein_coding MGP_BALBcJ_T0025488.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65256573 65257084 + MGP_BALBcJ_P0025488 Egr2 protein_coding protein_coding MGP_BALBcJ_T0025489.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65256633 65258645 + MGP_BALBcJ_P0025489 Egr2 protein_coding protein_coding MGP_BALBcJ_T0025490.1 MGP_BALBcJ_G0017261.1 mouse_genomes_project 10 65257386 65260892 + MGP_BALBcJ_P0025490 Egr2 protein_coding protein_coding MGP_BALBcJ_T0027590.1 MGP_BALBcJ_G0017888.1 mouse_genomes_project 10 129217705 129229520 - MGP_BALBcJ_P0027590 Neurod4 protein_coding protein_coding MGP_BALBcJ_T0003073.1 MGP_BALBcJ_G0002864.1 mouse_genomes_project 10 115008664 115011850 + Kcnmb4os1 antisense antisense MGP_BALBcJ_T0024803.1 MGP_BALBcJ_G0017046.1 mouse_genomes_project 10 25517111 26037916 + MGP_BALBcJ_P0024803 Ptprk protein_coding protein_coding MGP_BALBcJ_T0024804.1 MGP_BALBcJ_G0017046.1 mouse_genomes_project 10 25517372 26005371 + MGP_BALBcJ_P0024804 Ptprk protein_coding unknown_likely_coding MGP_BALBcJ_T0024805.1 MGP_BALBcJ_G0017046.1 mouse_genomes_project 10 25905723 26005371 + MGP_BALBcJ_P0024805 Ptprk protein_coding unknown_likely_coding MGP_BALBcJ_T0003066.1 MGP_BALBcJ_G0002860.1 mouse_genomes_project 10 97624615 97629948 - Gm16239 antisense antisense MGP_BALBcJ_T0026287.1 MGP_BALBcJ_G0017461.1 mouse_genomes_project 10 78813994 78817384 - MGP_BALBcJ_P0026287 Jsrp1 protein_coding protein_coding MGP_BALBcJ_T0026288.1 MGP_BALBcJ_G0017461.1 mouse_genomes_project 10 78813996 78818991 - MGP_BALBcJ_P0026288 Jsrp1 protein_coding protein_coding MGP_BALBcJ_T0026289.1 MGP_BALBcJ_G0017461.1 mouse_genomes_project 10 78813999 78818994 - MGP_BALBcJ_P0026289 Jsrp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026290.1 MGP_BALBcJ_G0017461.1 mouse_genomes_project 10 78815681 78818997 - MGP_BALBcJ_P0026290 Jsrp1 protein_coding protein_coding MGP_BALBcJ_T0026028.1 MGP_BALBcJ_G0017402.1 mouse_genomes_project 10 77801533 77811219 + MGP_BALBcJ_P0026028 Misp protein_coding protein_coding MGP_BALBcJ_T0026029.1 MGP_BALBcJ_G0017402.1 mouse_genomes_project 10 77803139 77811219 + MGP_BALBcJ_P0026029 Misp protein_coding protein_coding MGP_BALBcJ_T0099211.1 MGP_BALBcJ_G0037247.1 mouse_genomes_project 10 92575704 92575786 - Gm26122 snRNA snRNA MGP_BALBcJ_T0024335.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 615024 816460 + Plekhg1 protein_coding retained_intron MGP_BALBcJ_T0024336.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 615783 816428 + Plekhg1 protein_coding retained_intron MGP_BALBcJ_T0024337.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 746111 846066 + MGP_BALBcJ_P0024337 Plekhg1 protein_coding protein_coding MGP_BALBcJ_T0024338.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 751373 843311 + MGP_BALBcJ_P0024338 Plekhg1 protein_coding protein_coding MGP_BALBcJ_T0024339.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 782135 796845 + Plekhg1 protein_coding retained_intron MGP_BALBcJ_T0024340.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 782139 846060 + MGP_BALBcJ_P0024340 Plekhg1 protein_coding protein_coding MGP_BALBcJ_T0024341.1 MGP_BALBcJ_G0016910.1 mouse_genomes_project 10 836234 842288 + MGP_BALBcJ_P0024341 Plekhg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009619.1 MGP_BALBcJ_G0007744.1 mouse_genomes_project 10 127212138 127212214 + Gm25361 miRNA miRNA MGP_BALBcJ_T0003090.1 MGP_BALBcJ_G0002876.1 mouse_genomes_project 10 127201211 127204938 - Gm17201 antisense antisense MGP_BALBcJ_T0024891.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36487350 36529046 + Lama4 protein_coding retained_intron MGP_BALBcJ_T0024892.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36487350 36636278 + MGP_BALBcJ_P0024892 Lama4 protein_coding protein_coding MGP_BALBcJ_T0024893.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36487388 36570676 + Lama4 protein_coding retained_intron MGP_BALBcJ_T0024894.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36487405 36555979 + Lama4 protein_coding retained_intron MGP_BALBcJ_T0024895.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36487507 36577948 + Lama4 protein_coding retained_intron MGP_BALBcJ_T0024896.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36577233 36581096 + Lama4 protein_coding retained_intron MGP_BALBcJ_T0024897.1 MGP_BALBcJ_G0017087.1 mouse_genomes_project 10 36631888 36636187 + Lama4 protein_coding retained_intron MGP_BALBcJ_T0026179.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78256892 78276501 + MGP_BALBcJ_P0026179 Dazap1 protein_coding protein_coding MGP_BALBcJ_T0026180.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78260385 78284561 + MGP_BALBcJ_P0026180 Dazap1 protein_coding protein_coding MGP_BALBcJ_T0026181.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78260417 78284046 + MGP_BALBcJ_P0026181 Dazap1 protein_coding protein_coding MGP_BALBcJ_T0026182.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78260475 78284561 + MGP_BALBcJ_P0026182 Dazap1 protein_coding protein_coding MGP_BALBcJ_T0026183.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78260525 78273872 + Dazap1 protein_coding processed_transcript MGP_BALBcJ_T0026184.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78275918 78280931 + Dazap1 protein_coding retained_intron MGP_BALBcJ_T0026185.1 MGP_BALBcJ_G0017432.1 mouse_genomes_project 10 78278362 78280017 + Dazap1 protein_coding retained_intron MGP_BALBcJ_T0000817.1 MGP_BALBcJ_G0000750.1 mouse_genomes_project 10 85625020 85627362 + TEC TEC MGP_BALBcJ_T0000818.1 MGP_BALBcJ_G0000750.1 mouse_genomes_project 10 85626258 85626636 + TEC TEC MGP_BALBcJ_T0027520.1 MGP_BALBcJ_G0017837.1 mouse_genomes_project 10 127958095 127959179 - MGP_BALBcJ_P0027520 Olfr769 protein_coding protein_coding MGP_BALBcJ_T0000830.1 MGP_BALBcJ_G0000762.1 mouse_genomes_project 10 119337584 119341269 - TEC TEC MGP_BALBcJ_T0012415.1 MGP_BALBcJ_G0010512.1 mouse_genomes_project 10 104002142 104003066 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002994.1 MGP_BALBcJ_G0002804.1 mouse_genomes_project 10 11801815 11803995 - B230364G03Rik antisense antisense MGP_BALBcJ_T0099198.1 MGP_BALBcJ_G0037234.1 mouse_genomes_project 10 77682496 77682603 - Gm25794 snRNA snRNA MGP_BALBcJ_T0026071.1 MGP_BALBcJ_G0017409.1 mouse_genomes_project 10 77892040 77898917 - MGP_BALBcJ_P0026071 R3hdm4 protein_coding protein_coding MGP_BALBcJ_T0026072.1 MGP_BALBcJ_G0017409.1 mouse_genomes_project 10 77892225 77898993 - MGP_BALBcJ_P0026072 R3hdm4 protein_coding protein_coding MGP_BALBcJ_T0025866.1 MGP_BALBcJ_G0017342.1 mouse_genomes_project 10 75534432 75534795 + MGP_BALBcJ_P0025866 Gm10142 protein_coding protein_coding MGP_BALBcJ_T0025945.1 MGP_BALBcJ_G0017368.1 mouse_genomes_project 10 76587043 76593298 - MGP_BALBcJ_P0025945 Casp14 protein_coding protein_coding MGP_BALBcJ_T0026906.1 MGP_BALBcJ_G0017617.1 mouse_genomes_project 10 95063258 95068657 + MGP_BALBcJ_P0026906 Btg1 protein_coding protein_coding MGP_BALBcJ_T0026392.1 MGP_BALBcJ_G0017491.1 mouse_genomes_project 10 79351971 79358874 + MGP_BALBcJ_P0026392 Tbxa2r protein_coding protein_coding MGP_BALBcJ_T0026613.1 MGP_BALBcJ_G0017547.1 mouse_genomes_project 10 84202916 84204922 + MGP_BALBcJ_P0026613 Ascl4 protein_coding protein_coding MGP_BALBcJ_T0026614.1 MGP_BALBcJ_G0017547.1 mouse_genomes_project 10 84204009 84223048 + MGP_BALBcJ_P0026614 Ascl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003009.1 MGP_BALBcJ_G0002814.1 mouse_genomes_project 10 39147210 39150001 + Gm17196 antisense antisense MGP_BALBcJ_T0024712.1 MGP_BALBcJ_G0017006.1 mouse_genomes_project 10 19634993 19648992 + MGP_BALBcJ_P0024712 protein_coding protein_coding MGP_BALBcJ_T0024714.1 MGP_BALBcJ_G0017006.1 mouse_genomes_project 10 19640571 19654053 + MGP_BALBcJ_P0024714 protein_coding protein_coding MGP_BALBcJ_T0024716.1 MGP_BALBcJ_G0017006.1 mouse_genomes_project 10 19641238 19654050 + MGP_BALBcJ_P0024716 protein_coding protein_coding MGP_BALBcJ_T0012360.1 MGP_BALBcJ_G0010457.1 mouse_genomes_project 10 10922652 10924760 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006095.1 MGP_BALBcJ_G0005102.1 mouse_genomes_project 10 82769795 82775697 - Platr7 lincRNA lincRNA MGP_BALBcJ_T0026918.1 MGP_BALBcJ_G0017626.1 mouse_genomes_project 10 97543153 97643097 + MGP_BALBcJ_P0026918 Poc1b protein_coding protein_coding MGP_BALBcJ_T0026919.1 MGP_BALBcJ_G0017626.1 mouse_genomes_project 10 97543199 97642161 + MGP_BALBcJ_P0026919 Poc1b protein_coding protein_coding MGP_BALBcJ_T0026920.1 MGP_BALBcJ_G0017626.1 mouse_genomes_project 10 97543220 97643183 + MGP_BALBcJ_P0026920 Poc1b protein_coding protein_coding MGP_BALBcJ_T0026923.1 MGP_BALBcJ_G0017626.1 mouse_genomes_project 10 97567333 97637893 + MGP_BALBcJ_P0026923 Poc1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026924.1 MGP_BALBcJ_G0017626.1 mouse_genomes_project 10 97612122 97642137 + Poc1b protein_coding processed_transcript MGP_BALBcJ_T0026925.1 MGP_BALBcJ_G0017626.1 mouse_genomes_project 10 97637995 97641959 + Poc1b protein_coding processed_transcript MGP_BALBcJ_T0099164.1 MGP_BALBcJ_G0037200.1 mouse_genomes_project 10 2253987 2254094 + Gm23573 snRNA snRNA MGP_BALBcJ_T0006116.1 MGP_BALBcJ_G0005110.1 mouse_genomes_project 10 92278464 92283215 + 4930471D02Rik lincRNA lincRNA MGP_BALBcJ_T0025039.1 MGP_BALBcJ_G0017127.1 mouse_genomes_project 10 40383339 40456617 + MGP_BALBcJ_P0025039 Sec63 protein_coding protein_coding MGP_BALBcJ_T0025040.1 MGP_BALBcJ_G0017127.1 mouse_genomes_project 10 40383458 40454495 + Sec63 protein_coding retained_intron MGP_BALBcJ_T0025041.1 MGP_BALBcJ_G0017127.1 mouse_genomes_project 10 40383649 40437029 + Sec63 protein_coding retained_intron MGP_BALBcJ_T0025042.1 MGP_BALBcJ_G0017127.1 mouse_genomes_project 10 40442214 40453383 + Sec63 protein_coding processed_transcript MGP_BALBcJ_T0025043.1 MGP_BALBcJ_G0017127.1 mouse_genomes_project 10 40442214 40453386 + Sec63 protein_coding processed_transcript MGP_BALBcJ_T0102114.1 MGP_BALBcJ_G0039931.1 mouse_genomes_project 10 75715565 75716093 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100473.1 MGP_BALBcJ_G0038509.1 mouse_genomes_project 10 126871482 126871556 + Snord59a snoRNA snoRNA MGP_BALBcJ_T0027044.1 MGP_BALBcJ_G0017670.1 mouse_genomes_project 10 111437124 111439779 + MGP_BALBcJ_P0027044 Gm26596 protein_coding protein_coding MGP_BALBcJ_T0099206.1 MGP_BALBcJ_G0037242.1 mouse_genomes_project 10 86505835 86505950 - Gm26357 snRNA snRNA MGP_BALBcJ_T0012364.1 MGP_BALBcJ_G0010461.1 mouse_genomes_project 10 18412041 18413051 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026301.1 MGP_BALBcJ_G0017467.1 mouse_genomes_project 10 78908113 78909633 - MGP_BALBcJ_P0026301 Timm13 protein_coding protein_coding MGP_BALBcJ_T0024734.1 MGP_BALBcJ_G0017016.1 mouse_genomes_project 10 21285157 21286271 + MGP_BALBcJ_P0024734 Taar1 protein_coding protein_coding MGP_BALBcJ_T0027182.1 MGP_BALBcJ_G0017714.1 mouse_genomes_project 10 119135407 119141401 - protein_coding retained_intron MGP_BALBcJ_T0006118.1 MGP_BALBcJ_G0005112.1 mouse_genomes_project 10 93824929 93836199 + 5730420D15Rik lincRNA lincRNA MGP_BALBcJ_T0025966.1 MGP_BALBcJ_G0017381.1 mouse_genomes_project 10 77020611 77369002 + MGP_BALBcJ_P0025966 protein_coding protein_coding MGP_BALBcJ_T0024817.1 MGP_BALBcJ_G0017049.1 mouse_genomes_project 10 26599060 26599973 - MGP_BALBcJ_P0024817 Gm9996 protein_coding protein_coding MGP_BALBcJ_T0100419.1 MGP_BALBcJ_G0038455.1 mouse_genomes_project 10 8947075 8947201 + Gm25011 snoRNA snoRNA MGP_BALBcJ_T0100430.1 MGP_BALBcJ_G0038466.1 mouse_genomes_project 10 32541072 32541206 + Gm26341 snoRNA snoRNA MGP_BALBcJ_T0026156.1 MGP_BALBcJ_G0017427.1 mouse_genomes_project 10 78158765 78161130 + MGP_BALBcJ_P0026156 1600002K03Rik protein_coding protein_coding MGP_BALBcJ_T0024482.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6718813 6861499 - MGP_BALBcJ_P0024482 Stxbp5 protein_coding protein_coding MGP_BALBcJ_T0024483.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6723215 6861895 - MGP_BALBcJ_P0024483 Stxbp5 protein_coding protein_coding MGP_BALBcJ_T0024484.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6723253 6762248 - Stxbp5 protein_coding processed_transcript MGP_BALBcJ_T0024485.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6723838 6744137 - Stxbp5 protein_coding retained_intron MGP_BALBcJ_T0024486.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6724170 6861499 - MGP_BALBcJ_P0024486 Stxbp5 protein_coding protein_coding MGP_BALBcJ_T0024487.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6730321 6733743 - Stxbp5 protein_coding retained_intron MGP_BALBcJ_T0024488.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6730324 6732171 - Stxbp5 protein_coding retained_intron MGP_BALBcJ_T0024489.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6730431 6742112 - Stxbp5 protein_coding retained_intron MGP_BALBcJ_T0024490.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6732659 6762408 - MGP_BALBcJ_P0024490 Stxbp5 protein_coding protein_coding MGP_BALBcJ_T0024491.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6732825 6742112 - Stxbp5 protein_coding retained_intron MGP_BALBcJ_T0024492.1 MGP_BALBcJ_G0016943.1 mouse_genomes_project 10 6752841 6762379 - Stxbp5 protein_coding retained_intron MGP_BALBcJ_T0006067.1 MGP_BALBcJ_G0005081.1 mouse_genomes_project 10 51836025 51841185 + Gm16998 lincRNA lincRNA MGP_BALBcJ_T0025109.1 MGP_BALBcJ_G0017152.1 mouse_genomes_project 10 49227441 49246577 + MGP_BALBcJ_P0025109 Lilrb4a protein_coding protein_coding MGP_BALBcJ_T0025110.1 MGP_BALBcJ_G0017152.1 mouse_genomes_project 10 49227441 49246561 + MGP_BALBcJ_P0025110 Lilrb4a protein_coding protein_coding MGP_BALBcJ_T0025112.1 MGP_BALBcJ_G0017152.1 mouse_genomes_project 10 49240754 49246577 + MGP_BALBcJ_P0025112 Lilrb4a protein_coding protein_coding MGP_BALBcJ_T0026683.1 MGP_BALBcJ_G0017567.1 mouse_genomes_project 10 86665157 86699151 - MGP_BALBcJ_P0026683 Dram1 protein_coding protein_coding MGP_BALBcJ_T0026684.1 MGP_BALBcJ_G0017567.1 mouse_genomes_project 10 86665157 86699072 - MGP_BALBcJ_P0026684 Dram1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026685.1 MGP_BALBcJ_G0017567.1 mouse_genomes_project 10 86682875 86721700 - MGP_BALBcJ_P0026685 Dram1 protein_coding protein_coding MGP_BALBcJ_T0012382.1 MGP_BALBcJ_G0010479.1 mouse_genomes_project 10 40949837 40950192 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025292.1 MGP_BALBcJ_G0017211.1 mouse_genomes_project 10 58667020 58672006 + MGP_BALBcJ_P0025292 Pcbd1 protein_coding protein_coding MGP_BALBcJ_T0012412.1 MGP_BALBcJ_G0010509.1 mouse_genomes_project 10 94923365 94924274 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026715.1 MGP_BALBcJ_G0017573.1 mouse_genomes_project 10 87076560 87081943 + MGP_BALBcJ_P0026715 Arl1 protein_coding protein_coding MGP_BALBcJ_T0026716.1 MGP_BALBcJ_G0017573.1 mouse_genomes_project 10 87076770 87089652 + MGP_BALBcJ_P0026716 Arl1 protein_coding protein_coding MGP_BALBcJ_T0026717.1 MGP_BALBcJ_G0017573.1 mouse_genomes_project 10 87077263 87089112 + MGP_BALBcJ_P0026717 Arl1 protein_coding protein_coding MGP_BALBcJ_T0025185.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55772174 55785706 + MGP_BALBcJ_P0025185 Gcc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025186.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55772196 55821547 + MGP_BALBcJ_P0025186 Gcc2 protein_coding protein_coding MGP_BALBcJ_T0025187.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55772232 55821905 + MGP_BALBcJ_P0025187 Gcc2 protein_coding protein_coding MGP_BALBcJ_T0025188.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55772379 55785578 + MGP_BALBcJ_P0025188 Gcc2 protein_coding protein_coding MGP_BALBcJ_T0025189.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55772557 55784289 + Gcc2 protein_coding processed_transcript MGP_BALBcJ_T0025190.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55789688 55792537 + Gcc2 protein_coding retained_intron MGP_BALBcJ_T0025191.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55791199 55797347 + MGP_BALBcJ_P0025191 Gcc2 protein_coding protein_coding MGP_BALBcJ_T0025192.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55801719 55808561 + Gcc2 protein_coding retained_intron MGP_BALBcJ_T0025193.1 MGP_BALBcJ_G0017183.1 mouse_genomes_project 10 55814202 55821894 + Gcc2 protein_coding retained_intron MGP_BALBcJ_T0099178.1 MGP_BALBcJ_G0037214.1 mouse_genomes_project 10 36076375 36076482 - Gm22911 snRNA snRNA MGP_BALBcJ_T0025384.1 MGP_BALBcJ_G0017235.1 mouse_genomes_project 10 60046946 60067476 - MGP_BALBcJ_P0025384 Supv3l1 protein_coding protein_coding MGP_BALBcJ_T0025385.1 MGP_BALBcJ_G0017235.1 mouse_genomes_project 10 60046992 60067421 - MGP_BALBcJ_P0025385 Supv3l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025386.1 MGP_BALBcJ_G0017235.1 mouse_genomes_project 10 60047077 60048359 - Supv3l1 protein_coding retained_intron MGP_BALBcJ_T0025387.1 MGP_BALBcJ_G0017235.1 mouse_genomes_project 10 60047180 60048706 - Supv3l1 protein_coding retained_intron MGP_BALBcJ_T0025388.1 MGP_BALBcJ_G0017235.1 mouse_genomes_project 10 60050096 60050865 - Supv3l1 protein_coding processed_transcript MGP_BALBcJ_T0026889.1 MGP_BALBcJ_G0017609.1 mouse_genomes_project 10 93577999 93730051 - MGP_BALBcJ_P0026889 Cradd protein_coding protein_coding MGP_BALBcJ_T0026281.1 MGP_BALBcJ_G0017458.1 mouse_genomes_project 10 78801572 78804096 - MGP_BALBcJ_P0026281 Plekhj1 protein_coding protein_coding MGP_BALBcJ_T0027362.1 MGP_BALBcJ_G0017772.1 mouse_genomes_project 10 126512799 126520950 + MGP_BALBcJ_P0027362 Zbtb39 protein_coding protein_coding MGP_BALBcJ_T0100423.1 MGP_BALBcJ_G0038459.1 mouse_genomes_project 10 19007101 19007210 - Gm23839 snoRNA snoRNA MGP_BALBcJ_T0025616.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 70833027 72058271 + Pcdh15 protein_coding retained_intron MGP_BALBcJ_T0025617.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 70833120 71453695 + Pcdh15 protein_coding retained_intron MGP_BALBcJ_T0025618.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 70833138 71214109 + Pcdh15 protein_coding retained_intron MGP_BALBcJ_T0025619.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558453 72395405 + MGP_BALBcJ_P0025619 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025620.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558453 72385797 + MGP_BALBcJ_P0025620 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025621.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025621 Pcdh15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025622.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025622 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025623.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72397342 + MGP_BALBcJ_P0025623 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025624.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025624 Pcdh15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025625.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025625 Pcdh15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025626.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72397342 + MGP_BALBcJ_P0025626 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025627.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72397506 + MGP_BALBcJ_P0025627 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025628.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025628 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025629.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025629 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025630.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025630 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025631.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025631 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025632.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72400757 + MGP_BALBcJ_P0025632 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025633.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025633 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025634.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72384630 + MGP_BALBcJ_P0025634 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025635.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025635 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025636.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025636 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025637.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025637 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025638.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025638 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025639.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383568 + MGP_BALBcJ_P0025639 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025640.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72383696 + MGP_BALBcJ_P0025640 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025641.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025641 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025642.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025642 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025643.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558469 72395755 + MGP_BALBcJ_P0025643 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025644.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558529 72258853 + MGP_BALBcJ_P0025644 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025645.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558529 72258853 + MGP_BALBcJ_P0025645 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025646.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71558529 72258853 + MGP_BALBcJ_P0025646 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025647.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71685173 72397100 + MGP_BALBcJ_P0025647 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025648.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71685173 72397196 + MGP_BALBcJ_P0025648 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025649.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 71685173 72395246 + MGP_BALBcJ_P0025649 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025650.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72043313 72072440 + Pcdh15 protein_coding processed_transcript MGP_BALBcJ_T0025651.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72096366 72383699 + MGP_BALBcJ_P0025651 Pcdh15 protein_coding protein_coding MGP_BALBcJ_T0025652.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72127484 72138336 + Pcdh15 protein_coding retained_intron MGP_BALBcJ_T0025653.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72335104 72375648 + Pcdh15 protein_coding retained_intron MGP_BALBcJ_T0025654.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72381943 72397242 + Pcdh15 protein_coding processed_transcript MGP_BALBcJ_T0025655.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72382440 72387712 + Pcdh15 protein_coding retained_intron MGP_BALBcJ_T0025656.1 MGP_BALBcJ_G0017284.1 mouse_genomes_project 10 72382865 72393392 + Pcdh15 protein_coding processed_transcript MGP_BALBcJ_T0025106.1 MGP_BALBcJ_G0017149.1 mouse_genomes_project 10 48341301 48603216 + MGP_BALBcJ_P0025106 Ascc3 protein_coding protein_coding MGP_BALBcJ_T0025134.1 MGP_BALBcJ_G0017163.1 mouse_genomes_project 10 50163034 50185680 + MGP_BALBcJ_P0025134 Nus1 protein_coding protein_coding MGP_BALBcJ_T0025135.1 MGP_BALBcJ_G0017163.1 mouse_genomes_project 10 50174418 50178860 + MGP_BALBcJ_P0025135 Nus1 protein_coding protein_coding MGP_BALBcJ_T0003032.1 MGP_BALBcJ_G0002834.1 mouse_genomes_project 10 74184366 74196830 + 1700094J05Rik antisense antisense MGP_BALBcJ_T0003033.1 MGP_BALBcJ_G0002834.1 mouse_genomes_project 10 74193934 74194302 + 1700094J05Rik antisense antisense MGP_BALBcJ_T0027558.1 MGP_BALBcJ_G0017864.1 mouse_genomes_project 10 128613505 128614450 + MGP_BALBcJ_P0027558 Olfr804 protein_coding protein_coding MGP_BALBcJ_T0012374.1 MGP_BALBcJ_G0010471.1 mouse_genomes_project 10 23278393 23279003 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025242.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57544563 57560832 - MGP_BALBcJ_P0025242 Anapc16 protein_coding protein_coding MGP_BALBcJ_T0025243.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57545062 57560808 - MGP_BALBcJ_P0025243 Anapc16 protein_coding protein_coding MGP_BALBcJ_T0025244.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57545558 57547538 - Anapc16 protein_coding processed_transcript MGP_BALBcJ_T0025245.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57545577 57560692 - MGP_BALBcJ_P0025245 Anapc16 protein_coding protein_coding MGP_BALBcJ_T0025246.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57545633 57560783 - MGP_BALBcJ_P0025246 Anapc16 protein_coding protein_coding MGP_BALBcJ_T0025247.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57545740 57560466 - MGP_BALBcJ_P0025247 Anapc16 protein_coding protein_coding MGP_BALBcJ_T0025248.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57547520 57548235 - Anapc16 protein_coding retained_intron MGP_BALBcJ_T0025249.1 MGP_BALBcJ_G0017201.1 mouse_genomes_project 10 57552977 57555441 - Anapc16 protein_coding retained_intron MGP_BALBcJ_T0000822.1 MGP_BALBcJ_G0000754.1 mouse_genomes_project 10 105911781 105912720 - TEC TEC MGP_BALBcJ_T0011253.1 MGP_BALBcJ_G0009378.1 mouse_genomes_project 10 76237953 76238261 - Gm22514 misc_RNA misc_RNA MGP_BALBcJ_T0025867.1 MGP_BALBcJ_G0017343.1 mouse_genomes_project 10 75539211 75539882 + MGP_BALBcJ_P0025867 Krtap12-1 protein_coding protein_coding MGP_BALBcJ_T0000806.1 MGP_BALBcJ_G0000739.1 mouse_genomes_project 10 16049662 16049952 - TEC TEC MGP_BALBcJ_T0027474.1 MGP_BALBcJ_G0017813.1 mouse_genomes_project 10 127439653 127441630 - MGP_BALBcJ_P0027474 Rps26 protein_coding protein_coding MGP_BALBcJ_T0006065.1 MGP_BALBcJ_G0005079.1 mouse_genomes_project 10 39203790 39206621 - Gm29095 lincRNA lincRNA MGP_BALBcJ_T0024738.1 MGP_BALBcJ_G0017020.1 mouse_genomes_project 10 21341755 21342769 + MGP_BALBcJ_P0024738 Taar5 protein_coding protein_coding MGP_BALBcJ_T0026497.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79664230 79673975 + MGP_BALBcJ_P0026497 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026498.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79664269 79665438 + MGP_BALBcJ_P0026498 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026499.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79664323 79685797 + MGP_BALBcJ_P0026499 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026500.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79664396 79665433 + MGP_BALBcJ_P0026500 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026501.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79669385 79678668 + MGP_BALBcJ_P0026501 Ankrd24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026502.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79669389 79685794 + Ankrd24 protein_coding retained_intron MGP_BALBcJ_T0026503.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79669389 79672096 + MGP_BALBcJ_P0026503 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026504.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79669395 79671573 + Ankrd24 protein_coding retained_intron MGP_BALBcJ_T0026505.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79669395 79675574 + MGP_BALBcJ_P0026505 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026506.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79669403 79675918 + MGP_BALBcJ_P0026506 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026507.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79676576 79678608 + MGP_BALBcJ_P0026507 Ankrd24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026508.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79676588 79681626 + Ankrd24 protein_coding retained_intron MGP_BALBcJ_T0026509.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79679459 79685661 + MGP_BALBcJ_P0026509 Ankrd24 protein_coding protein_coding MGP_BALBcJ_T0026510.1 MGP_BALBcJ_G0017510.1 mouse_genomes_project 10 79682290 79682820 + Ankrd24 protein_coding retained_intron MGP_BALBcJ_T0026495.1 MGP_BALBcJ_G0017509.1 mouse_genomes_project 10 79657095 79663228 - MGP_BALBcJ_P0026495 Sirt6 protein_coding protein_coding MGP_BALBcJ_T0026496.1 MGP_BALBcJ_G0017509.1 mouse_genomes_project 10 79661217 79663257 - Sirt6 protein_coding retained_intron MGP_BALBcJ_T0017055.1 MGP_BALBcJ_G0015067.1 mouse_genomes_project 10 4694177 4711904 - Gm20470 processed_transcript processed_transcript MGP_BALBcJ_T0003057.1 MGP_BALBcJ_G0002853.1 mouse_genomes_project 10 85177034 85215857 + Gm16268 antisense antisense MGP_BALBcJ_T0100469.1 MGP_BALBcJ_G0038505.1 mouse_genomes_project 10 115785174 115785251 - Gm26311 snoRNA snoRNA MGP_BALBcJ_T0100471.1 MGP_BALBcJ_G0038507.1 mouse_genomes_project 10 125583194 125583321 - Gm24179 snoRNA snoRNA MGP_BALBcJ_T0025056.1 MGP_BALBcJ_G0017131.1 mouse_genomes_project 10 40852039 41034946 + MGP_BALBcJ_P0025056 Pdss2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025057.1 MGP_BALBcJ_G0017131.1 mouse_genomes_project 10 40852039 41070699 + MGP_BALBcJ_P0025057 Pdss2 protein_coding protein_coding MGP_BALBcJ_T0025058.1 MGP_BALBcJ_G0017131.1 mouse_genomes_project 10 40852070 40976666 + Pdss2 protein_coding retained_intron MGP_BALBcJ_T0025059.1 MGP_BALBcJ_G0017131.1 mouse_genomes_project 10 40852153 41095796 + MGP_BALBcJ_P0025059 Pdss2 protein_coding protein_coding MGP_BALBcJ_T0025060.1 MGP_BALBcJ_G0017131.1 mouse_genomes_project 10 40852289 40976263 + Pdss2 protein_coding retained_intron MGP_BALBcJ_T0025061.1 MGP_BALBcJ_G0017131.1 mouse_genomes_project 10 41023708 41070345 + MGP_BALBcJ_P0025061 Pdss2 protein_coding protein_coding MGP_BALBcJ_T0006062.1 MGP_BALBcJ_G0005076.1 mouse_genomes_project 10 34794473 34837522 + Gm26535 lincRNA lincRNA MGP_BALBcJ_T0098443.1 MGP_BALBcJ_G0036497.1 mouse_genomes_project 10 28122957 28123051 - Gm24189 rRNA rRNA MGP_BALBcJ_T0025161.1 MGP_BALBcJ_G0017176.1 mouse_genomes_project 10 55298414 55325651 + MGP_BALBcJ_P0025161 Hsf2 protein_coding protein_coding MGP_BALBcJ_T0024378.1 MGP_BALBcJ_G0016919.1 mouse_genomes_project 10 1965316 1968100 + MGP_BALBcJ_P0024378 Gm10097 protein_coding protein_coding MGP_BALBcJ_T0026656.1 MGP_BALBcJ_G0017561.1 mouse_genomes_project 10 85859810 85922292 + MGP_BALBcJ_P0026656 Pah protein_coding protein_coding MGP_BALBcJ_T0026657.1 MGP_BALBcJ_G0017561.1 mouse_genomes_project 10 85859945 85922190 + MGP_BALBcJ_P0026657 Pah protein_coding protein_coding MGP_BALBcJ_T0026658.1 MGP_BALBcJ_G0017561.1 mouse_genomes_project 10 85860042 85922011 + MGP_BALBcJ_P0026658 Pah protein_coding protein_coding MGP_BALBcJ_T0026659.1 MGP_BALBcJ_G0017561.1 mouse_genomes_project 10 85884259 85908245 + MGP_BALBcJ_P0026659 Pah protein_coding protein_coding MGP_BALBcJ_T0027431.1 MGP_BALBcJ_G0017797.1 mouse_genomes_project 10 127111589 127130660 + MGP_BALBcJ_P0027431 Pan2 protein_coding unknown_likely_coding MGP_BALBcJ_T0027432.1 MGP_BALBcJ_G0017797.1 mouse_genomes_project 10 127111590 127130666 + MGP_BALBcJ_P0027432 Pan2 protein_coding protein_coding MGP_BALBcJ_T0026825.1 MGP_BALBcJ_G0017593.1 mouse_genomes_project 10 91871018 91903842 + MGP_BALBcJ_P0026825 Hal protein_coding protein_coding MGP_BALBcJ_T0026826.1 MGP_BALBcJ_G0017593.1 mouse_genomes_project 10 91871053 91900997 + MGP_BALBcJ_P0026826 Hal protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026827.1 MGP_BALBcJ_G0017593.1 mouse_genomes_project 10 91879179 91883596 + Hal protein_coding retained_intron MGP_BALBcJ_T0026828.1 MGP_BALBcJ_G0017593.1 mouse_genomes_project 10 91884063 91901266 + Hal protein_coding processed_transcript MGP_BALBcJ_T0024868.1 MGP_BALBcJ_G0017076.1 mouse_genomes_project 10 31556409 31558313 - MGP_BALBcJ_P0024868 Fam26f protein_coding protein_coding MGP_BALBcJ_T0098304.1 MGP_BALBcJ_G0036358.1 mouse_genomes_project 10 70833139 70833611 + pseudogene pseudogene MGP_BALBcJ_T0027106.1 MGP_BALBcJ_G0017695.1 mouse_genomes_project 10 115850088 115852355 + MGP_BALBcJ_P0027106 Gm10936 protein_coding protein_coding MGP_BALBcJ_T0025075.1 MGP_BALBcJ_G0017138.1 mouse_genomes_project 10 41590247 41649011 - MGP_BALBcJ_P0025075 Aim1 protein_coding protein_coding MGP_BALBcJ_T0025076.1 MGP_BALBcJ_G0017138.1 mouse_genomes_project 10 41590576 41796409 - MGP_BALBcJ_P0025076 Aim1 protein_coding protein_coding MGP_BALBcJ_T0024710.1 MGP_BALBcJ_G0017004.1 mouse_genomes_project 10 19171169 19176254 - MGP_BALBcJ_P0024710 protein_coding protein_coding MGP_BALBcJ_T0027181.1 MGP_BALBcJ_G0017713.1 mouse_genomes_project 10 118880129 118885159 + MGP_BALBcJ_P0027181 Llph protein_coding protein_coding MGP_BALBcJ_T0027433.1 MGP_BALBcJ_G0017798.1 mouse_genomes_project 10 127131767 127136494 + MGP_BALBcJ_P0027433 Cnpy2 protein_coding protein_coding MGP_BALBcJ_T0006090.1 MGP_BALBcJ_G0005098.1 mouse_genomes_project 10 78686389 78692360 + Gm26541 lincRNA lincRNA MGP_BALBcJ_T0025969.1 MGP_BALBcJ_G0017384.1 mouse_genomes_project 10 77502725 77509888 - Plpp2 protein_coding processed_transcript MGP_BALBcJ_T0025970.1 MGP_BALBcJ_G0017384.1 mouse_genomes_project 10 77503427 77509821 - MGP_BALBcJ_P0025970 Plpp2 protein_coding protein_coding MGP_BALBcJ_T0025971.1 MGP_BALBcJ_G0017384.1 mouse_genomes_project 10 77503782 77509918 - MGP_BALBcJ_P0025971 Plpp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025995.1 MGP_BALBcJ_G0017392.1 mouse_genomes_project 10 77661004 77667204 + MGP_BALBcJ_P0025995 Cdc34 protein_coding protein_coding MGP_BALBcJ_T0025996.1 MGP_BALBcJ_G0017392.1 mouse_genomes_project 10 77661113 77667204 + MGP_BALBcJ_P0025996 Cdc34 protein_coding protein_coding MGP_BALBcJ_T0100416.1 MGP_BALBcJ_G0038452.1 mouse_genomes_project 10 7632523 7632654 + Gm23601 snoRNA snoRNA MGP_BALBcJ_T0098736.1 MGP_BALBcJ_G0036790.1 mouse_genomes_project 10 127246362 127246493 + Gm26347 scaRNA scaRNA MGP_BALBcJ_T0027475.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127445872 127461309 - MGP_BALBcJ_P0027475 Ikzf4 protein_coding protein_coding MGP_BALBcJ_T0027476.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127447434 127461191 - MGP_BALBcJ_P0027476 Ikzf4 protein_coding protein_coding MGP_BALBcJ_T0027477.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127447487 127461209 - MGP_BALBcJ_P0027477 Ikzf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027478.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127448732 127459660 - MGP_BALBcJ_P0027478 Ikzf4 protein_coding protein_coding MGP_BALBcJ_T0027479.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127455272 127461161 - MGP_BALBcJ_P0027479 Ikzf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027480.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127456188 127461155 - MGP_BALBcJ_P0027480 Ikzf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027481.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127456214 127461172 - MGP_BALBcJ_P0027481 Ikzf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027482.1 MGP_BALBcJ_G0017814.1 mouse_genomes_project 10 127459449 127461191 - Ikzf4 protein_coding processed_transcript MGP_BALBcJ_T0027211.1 MGP_BALBcJ_G0017727.1 mouse_genomes_project 10 120804251 120823677 - MGP_BALBcJ_P0027211 Tmem5 protein_coding protein_coding MGP_BALBcJ_T0027212.1 MGP_BALBcJ_G0017727.1 mouse_genomes_project 10 120806960 120823462 - MGP_BALBcJ_P0027212 Tmem5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027213.1 MGP_BALBcJ_G0017727.1 mouse_genomes_project 10 120807382 120815666 - Tmem5 protein_coding retained_intron MGP_BALBcJ_T0027214.1 MGP_BALBcJ_G0017727.1 mouse_genomes_project 10 120814921 120816982 - Tmem5 protein_coding retained_intron MGP_BALBcJ_T0027215.1 MGP_BALBcJ_G0017727.1 mouse_genomes_project 10 120815298 120822413 - Tmem5 protein_coding retained_intron MGP_BALBcJ_T0027216.1 MGP_BALBcJ_G0017727.1 mouse_genomes_project 10 120822332 120823432 - Tmem5 protein_coding processed_transcript MGP_BALBcJ_T0026909.1 MGP_BALBcJ_G0017619.1 mouse_genomes_project 10 96028108 96035210 + MGP_BALBcJ_P0026909 Lum protein_coding protein_coding MGP_BALBcJ_T0026939.1 MGP_BALBcJ_G0017635.1 mouse_genomes_project 10 99028170 99041302 - MGP_BALBcJ_P0026939 4930430F08Rik protein_coding protein_coding MGP_BALBcJ_T0027539.1 MGP_BALBcJ_G0017850.1 mouse_genomes_project 10 128319077 128329406 + MGP_BALBcJ_P0027539 Olfr786 protein_coding protein_coding MGP_BALBcJ_T0027540.1 MGP_BALBcJ_G0017850.1 mouse_genomes_project 10 128328467 128329406 + MGP_BALBcJ_P0027540 Olfr786 protein_coding protein_coding MGP_BALBcJ_T0006080.1 MGP_BALBcJ_G0005090.1 mouse_genomes_project 10 64330163 64331108 + Gm28139 lincRNA lincRNA MGP_BALBcJ_T0025283.1 MGP_BALBcJ_G0017208.1 mouse_genomes_project 10 57964602 57968421 + MGP_BALBcJ_P0025283 Gm17455 protein_coding protein_coding MGP_BALBcJ_T0100453.1 MGP_BALBcJ_G0038489.1 mouse_genomes_project 10 79194588 79194652 + Snord37 snoRNA snoRNA MGP_BALBcJ_T0026870.1 MGP_BALBcJ_G0017603.1 mouse_genomes_project 10 92535505 92589303 + MGP_BALBcJ_P0026870 Nr2c1 protein_coding protein_coding MGP_BALBcJ_T0026871.1 MGP_BALBcJ_G0017603.1 mouse_genomes_project 10 92535901 92587775 + MGP_BALBcJ_P0026871 Nr2c1 protein_coding protein_coding MGP_BALBcJ_T0026872.1 MGP_BALBcJ_G0017603.1 mouse_genomes_project 10 92543804 92587445 + MGP_BALBcJ_P0026872 Nr2c1 protein_coding protein_coding MGP_BALBcJ_T0027234.1 MGP_BALBcJ_G0017735.1 mouse_genomes_project 10 125615748 125644335 - MGP_BALBcJ_P0027234 Xrcc6bp1 protein_coding protein_coding MGP_BALBcJ_T0027235.1 MGP_BALBcJ_G0017735.1 mouse_genomes_project 10 125630415 125644335 - MGP_BALBcJ_P0027235 Xrcc6bp1 protein_coding protein_coding MGP_BALBcJ_T0006097.1 MGP_BALBcJ_G0005104.1 mouse_genomes_project 10 86721863 86726331 - Gm26546 lincRNA lincRNA MGP_BALBcJ_T0011254.1 MGP_BALBcJ_G0009379.1 mouse_genomes_project 10 90449460 90449615 - Gm27544 misc_RNA misc_RNA MGP_BALBcJ_T0025823.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75097598 75231498 - MGP_BALBcJ_P0025823 Adarb1 protein_coding protein_coding MGP_BALBcJ_T0025824.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75097598 75231493 - MGP_BALBcJ_P0025824 Adarb1 protein_coding protein_coding MGP_BALBcJ_T0025825.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75097599 75231498 - MGP_BALBcJ_P0025825 Adarb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025826.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75097599 75231455 - MGP_BALBcJ_P0025826 Adarb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025827.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75097599 75231455 - MGP_BALBcJ_P0025827 Adarb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025828.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75097600 75231498 - MGP_BALBcJ_P0025828 Adarb1 protein_coding protein_coding MGP_BALBcJ_T0025829.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75122817 75231439 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0025830.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75122831 75231493 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0025831.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75129496 75231466 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0025832.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75132043 75231082 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0025833.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75132234 75231445 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0025834.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75132420 75146867 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0025835.1 MGP_BALBcJ_G0017333.1 mouse_genomes_project 10 75132495 75183628 - Adarb1 protein_coding retained_intron MGP_BALBcJ_T0024647.1 MGP_BALBcJ_G0016985.1 mouse_genomes_project 10 16955853 16959396 - MGP_BALBcJ_P0024647 Slc35d3 protein_coding protein_coding MGP_BALBcJ_T0025863.1 MGP_BALBcJ_G0017339.1 mouse_genomes_project 10 75508032 75509132 - MGP_BALBcJ_P0025863 Gm19402 protein_coding protein_coding MGP_BALBcJ_T0101601.1 MGP_BALBcJ_G0039624.1 mouse_genomes_project 10 7574043 7584413 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101602.1 MGP_BALBcJ_G0039624.1 mouse_genomes_project 10 7581150 7582147 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0024595.1 MGP_BALBcJ_G0016966.1 mouse_genomes_project 10 11759598 11762190 - MGP_BALBcJ_P0024595 Gje1 protein_coding protein_coding MGP_BALBcJ_T0025590.1 MGP_BALBcJ_G0017277.1 mouse_genomes_project 10 68615319 68672003 + MGP_BALBcJ_P0025590 4930533K18Rik protein_coding protein_coding MGP_BALBcJ_T0027326.1 MGP_BALBcJ_G0017762.1 mouse_genomes_project 10 126272598 126279748 + MGP_BALBcJ_P0027326 Stac3 protein_coding protein_coding MGP_BALBcJ_T0027327.1 MGP_BALBcJ_G0017762.1 mouse_genomes_project 10 126272606 126273751 + MGP_BALBcJ_P0027327 Stac3 protein_coding protein_coding MGP_BALBcJ_T0027328.1 MGP_BALBcJ_G0017762.1 mouse_genomes_project 10 126272629 126279740 + MGP_BALBcJ_P0027328 Stac3 protein_coding protein_coding MGP_BALBcJ_T0027329.1 MGP_BALBcJ_G0017762.1 mouse_genomes_project 10 126275403 126278413 + Stac3 protein_coding retained_intron MGP_BALBcJ_T0027330.1 MGP_BALBcJ_G0017762.1 mouse_genomes_project 10 126278139 126278917 + Stac3 protein_coding retained_intron MGP_BALBcJ_T0025151.1 MGP_BALBcJ_G0017170.1 mouse_genomes_project 10 51665260 51835900 - MGP_BALBcJ_P0025151 Man1a protein_coding protein_coding MGP_BALBcJ_T0025152.1 MGP_BALBcJ_G0017170.1 mouse_genomes_project 10 51667487 51835813 - MGP_BALBcJ_P0025152 Man1a protein_coding protein_coding MGP_BALBcJ_T0025153.1 MGP_BALBcJ_G0017170.1 mouse_genomes_project 10 51734559 51835813 - Man1a protein_coding retained_intron MGP_BALBcJ_T0025154.1 MGP_BALBcJ_G0017170.1 mouse_genomes_project 10 51764659 51835840 - MGP_BALBcJ_P0025154 Man1a protein_coding protein_coding MGP_BALBcJ_T0025155.1 MGP_BALBcJ_G0017170.1 mouse_genomes_project 10 51772796 51835841 - Man1a protein_coding retained_intron MGP_BALBcJ_T0012366.1 MGP_BALBcJ_G0010463.1 mouse_genomes_project 10 19271987 19272927 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026158.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78221509 78239343 + MGP_BALBcJ_P0026158 Mum1 protein_coding protein_coding MGP_BALBcJ_T0026159.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78221730 78239340 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026160.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78221747 78228132 + MGP_BALBcJ_P0026160 Mum1 protein_coding protein_coding MGP_BALBcJ_T0026161.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78221755 78239338 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026162.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78221826 78224247 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026163.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78229645 78239343 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026164.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78229646 78232566 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026165.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78229711 78239341 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026166.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78231562 78235844 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026167.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78236989 78239340 + Mum1 protein_coding retained_intron MGP_BALBcJ_T0026168.1 MGP_BALBcJ_G0017429.1 mouse_genomes_project 10 78238051 78239340 + Mum1 protein_coding processed_transcript MGP_BALBcJ_T0098815.1 MGP_BALBcJ_G0036868.1 mouse_genomes_project 10 119476738 119477853 - Gm15961 sense_intronic sense_intronic MGP_BALBcJ_T0027455.1 MGP_BALBcJ_G0017806.1 mouse_genomes_project 10 127302994 127306010 - MGP_BALBcJ_P0027455 Myl6 protein_coding protein_coding MGP_BALBcJ_T0027456.1 MGP_BALBcJ_G0017806.1 mouse_genomes_project 10 127303870 127305946 - MGP_BALBcJ_P0027456 Myl6 protein_coding unknown_likely_coding MGP_BALBcJ_T0012365.1 MGP_BALBcJ_G0010462.1 mouse_genomes_project 10 19226164 19226519 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025994.1 MGP_BALBcJ_G0017391.1 mouse_genomes_project 10 77648273 77654940 + MGP_BALBcJ_P0025994 Tpgs1 protein_coding protein_coding MGP_BALBcJ_T0025794.1 MGP_BALBcJ_G0017326.1 mouse_genomes_project 10 74509938 74527321 - MGP_BALBcJ_P0025794 Col6a1 protein_coding protein_coding MGP_BALBcJ_T0025795.1 MGP_BALBcJ_G0017326.1 mouse_genomes_project 10 74516162 74520389 - Col6a1 protein_coding retained_intron MGP_BALBcJ_T0027552.1 MGP_BALBcJ_G0017860.1 mouse_genomes_project 10 128568349 128569285 + MGP_BALBcJ_P0027552 Olfr800 protein_coding protein_coding MGP_BALBcJ_T0024602.1 MGP_BALBcJ_G0016969.1 mouse_genomes_project 10 15029465 15074583 - MGP_BALBcJ_P0024602 Heca protein_coding protein_coding MGP_BALBcJ_T0099217.1 MGP_BALBcJ_G0037253.1 mouse_genomes_project 10 107850275 107850381 - Gm23041 snRNA snRNA MGP_BALBcJ_T0017088.1 MGP_BALBcJ_G0015077.1 mouse_genomes_project 10 104071291 104079388 + Gm15663 processed_transcript antisense MGP_BALBcJ_T0017089.1 MGP_BALBcJ_G0015077.1 mouse_genomes_project 10 104071899 104081247 + Gm15663 processed_transcript lincRNA MGP_BALBcJ_T0099200.1 MGP_BALBcJ_G0037236.1 mouse_genomes_project 10 77969022 77969129 + Gm26243 snRNA snRNA MGP_BALBcJ_T0025418.1 MGP_BALBcJ_G0017245.1 mouse_genomes_project 10 60571476 60606515 + MGP_BALBcJ_P0025418 Slc25a16 protein_coding protein_coding MGP_BALBcJ_T0025419.1 MGP_BALBcJ_G0017245.1 mouse_genomes_project 10 60571510 60584256 + Slc25a16 protein_coding retained_intron MGP_BALBcJ_T0025420.1 MGP_BALBcJ_G0017245.1 mouse_genomes_project 10 60571523 60604446 + MGP_BALBcJ_P0025420 Slc25a16 protein_coding protein_coding MGP_BALBcJ_T0025421.1 MGP_BALBcJ_G0017245.1 mouse_genomes_project 10 60602458 60604451 + Slc25a16 protein_coding retained_intron MGP_BALBcJ_T0003039.1 MGP_BALBcJ_G0002840.1 mouse_genomes_project 10 78370749 78372011 + Gm15124 antisense antisense MGP_BALBcJ_T0101603.1 MGP_BALBcJ_G0039625.1 mouse_genomes_project 10 26319380 26355604 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101604.1 MGP_BALBcJ_G0039625.1 mouse_genomes_project 10 26355165 26356928 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0025997.1 MGP_BALBcJ_G0017393.1 mouse_genomes_project 10 77667829 77674059 + MGP_BALBcJ_P0025997 Gzmm protein_coding protein_coding MGP_BALBcJ_T0025998.1 MGP_BALBcJ_G0017393.1 mouse_genomes_project 10 77672555 77674058 + Gzmm protein_coding processed_transcript MGP_BALBcJ_T0026407.1 MGP_BALBcJ_G0017494.1 mouse_genomes_project 10 79381138 79389878 + MGP_BALBcJ_P0026407 Mfsd12 protein_coding protein_coding MGP_BALBcJ_T0026408.1 MGP_BALBcJ_G0017494.1 mouse_genomes_project 10 79381199 79384885 + MGP_BALBcJ_P0026408 Mfsd12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009597.1 MGP_BALBcJ_G0007722.1 mouse_genomes_project 10 95296546 95296635 - Gm24587 miRNA miRNA MGP_BALBcJ_T0006050.1 MGP_BALBcJ_G0005067.1 mouse_genomes_project 10 14035068 14187350 - Gm20125 lincRNA lincRNA MGP_BALBcJ_T0027427.1 MGP_BALBcJ_G0017794.1 mouse_genomes_project 10 127073088 127075243 + MGP_BALBcJ_P0027427 Apof protein_coding protein_coding MGP_BALBcJ_T0026564.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81814773 81863427 - MGP_BALBcJ_P0026564 Appl2 protein_coding protein_coding MGP_BALBcJ_T0026565.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81815137 81817865 - MGP_BALBcJ_P0026565 Appl2 protein_coding protein_coding MGP_BALBcJ_T0026566.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81815482 81823395 - MGP_BALBcJ_P0026566 Appl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026567.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81816638 81818119 - Appl2 protein_coding retained_intron MGP_BALBcJ_T0026568.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81817501 81826268 - Appl2 protein_coding retained_intron MGP_BALBcJ_T0026569.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81817605 81825655 - Appl2 protein_coding retained_intron MGP_BALBcJ_T0026570.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81820340 81863359 - Appl2 protein_coding retained_intron MGP_BALBcJ_T0026571.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81820460 81826115 - Appl2 protein_coding retained_intron MGP_BALBcJ_T0026572.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81822993 81825489 - Appl2 protein_coding retained_intron MGP_BALBcJ_T0026573.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81828645 81842687 - Appl2 protein_coding processed_transcript MGP_BALBcJ_T0026574.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81831805 81863354 - MGP_BALBcJ_P0026574 Appl2 protein_coding protein_coding MGP_BALBcJ_T0026575.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81835097 81863292 - MGP_BALBcJ_P0026575 Appl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026576.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81835211 81851828 - Appl2 protein_coding processed_transcript MGP_BALBcJ_T0026577.1 MGP_BALBcJ_G0017531.1 mouse_genomes_project 10 81839030 81863364 - MGP_BALBcJ_P0026577 Appl2 protein_coding protein_coding MGP_BALBcJ_T0009549.1 MGP_BALBcJ_G0007674.1 mouse_genomes_project 10 22482251 22482336 + Gm22566 miRNA miRNA MGP_BALBcJ_T0025506.1 MGP_BALBcJ_G0017268.1 mouse_genomes_project 10 66449365 66501960 + MGP_BALBcJ_P0025506 Tmem26 protein_coding protein_coding MGP_BALBcJ_T0000807.1 MGP_BALBcJ_G0000740.1 mouse_genomes_project 10 19185689 19187760 - TEC TEC MGP_BALBcJ_T0025390.1 MGP_BALBcJ_G0017237.1 mouse_genomes_project 10 60072582 60104815 - MGP_BALBcJ_P0025390 Vps26a protein_coding protein_coding MGP_BALBcJ_T0025391.1 MGP_BALBcJ_G0017237.1 mouse_genomes_project 10 60072582 60104608 - MGP_BALBcJ_P0025391 Vps26a protein_coding protein_coding MGP_BALBcJ_T0026514.1 MGP_BALBcJ_G0017514.1 mouse_genomes_project 10 80241881 80270230 + MGP_BALBcJ_P0026514 AU041133 protein_coding protein_coding MGP_BALBcJ_T0026515.1 MGP_BALBcJ_G0017514.1 mouse_genomes_project 10 80252130 80269176 + MGP_BALBcJ_P0026515 AU041133 protein_coding protein_coding MGP_BALBcJ_T0009610.1 MGP_BALBcJ_G0007735.1 mouse_genomes_project 10 121918635 121918731 - Gm27920 miRNA miRNA MGP_BALBcJ_T0026748.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88227406 89332380 + MGP_BALBcJ_P0026748 protein_coding protein_coding MGP_BALBcJ_T0026749.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88227435 88866234 + MGP_BALBcJ_P0026749 protein_coding protein_coding MGP_BALBcJ_T0026750.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88227535 89328553 + MGP_BALBcJ_P0026750 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026751.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88227569 89040094 + MGP_BALBcJ_P0026751 protein_coding protein_coding MGP_BALBcJ_T0026752.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88358285 88399409 + protein_coding processed_transcript MGP_BALBcJ_T0026753.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88413554 88434175 + protein_coding processed_transcript MGP_BALBcJ_T0026754.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88434207 88442473 + MGP_BALBcJ_P0026754 protein_coding protein_coding MGP_BALBcJ_T0026755.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88931612 89335461 + MGP_BALBcJ_P0026755 protein_coding protein_coding MGP_BALBcJ_T0026756.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932134 89280240 + MGP_BALBcJ_P0026756 protein_coding protein_coding MGP_BALBcJ_T0026757.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932258 89332419 + MGP_BALBcJ_P0026757 protein_coding protein_coding MGP_BALBcJ_T0026758.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932396 89333620 + MGP_BALBcJ_P0026758 protein_coding protein_coding MGP_BALBcJ_T0026759.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932450 89333863 + MGP_BALBcJ_P0026759 protein_coding protein_coding MGP_BALBcJ_T0026760.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932492 89332373 + MGP_BALBcJ_P0026760 protein_coding protein_coding MGP_BALBcJ_T0026761.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932571 89333025 + MGP_BALBcJ_P0026761 protein_coding protein_coding MGP_BALBcJ_T0026762.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932598 89333825 + MGP_BALBcJ_P0026762 protein_coding protein_coding MGP_BALBcJ_T0026763.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932616 89333863 + MGP_BALBcJ_P0026763 protein_coding protein_coding MGP_BALBcJ_T0026764.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932629 88956358 + protein_coding processed_transcript MGP_BALBcJ_T0026765.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932630 88943144 + MGP_BALBcJ_P0026765 protein_coding protein_coding MGP_BALBcJ_T0026766.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932646 88943291 + MGP_BALBcJ_P0026766 protein_coding protein_coding MGP_BALBcJ_T0026767.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932681 89333140 + MGP_BALBcJ_P0026767 protein_coding protein_coding MGP_BALBcJ_T0026768.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932695 89334152 + MGP_BALBcJ_P0026768 protein_coding protein_coding MGP_BALBcJ_T0026769.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932845 89332380 + MGP_BALBcJ_P0026769 protein_coding protein_coding MGP_BALBcJ_T0026770.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 88932872 89331981 + MGP_BALBcJ_P0026770 protein_coding protein_coding MGP_BALBcJ_T0026771.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89188613 89256207 + protein_coding processed_transcript MGP_BALBcJ_T0026772.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89189449 89332373 + MGP_BALBcJ_P0026772 protein_coding protein_coding MGP_BALBcJ_T0026773.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89189581 89333618 + MGP_BALBcJ_P0026773 protein_coding protein_coding MGP_BALBcJ_T0026774.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89189797 89333445 + MGP_BALBcJ_P0026774 protein_coding protein_coding MGP_BALBcJ_T0026775.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89189835 89273645 + protein_coding processed_transcript MGP_BALBcJ_T0026776.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89189859 89280265 + protein_coding processed_transcript MGP_BALBcJ_T0026777.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89253976 89285713 + MGP_BALBcJ_P0026777 protein_coding protein_coding MGP_BALBcJ_T0026778.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89253987 89333618 + MGP_BALBcJ_P0026778 protein_coding protein_coding MGP_BALBcJ_T0026779.1 MGP_BALBcJ_G0017583.1 mouse_genomes_project 10 89254067 89332253 + MGP_BALBcJ_P0026779 protein_coding protein_coding MGP_BALBcJ_T0006139.1 MGP_BALBcJ_G0005127.1 mouse_genomes_project 10 127311481 127316359 + A430046D13Rik lincRNA lincRNA MGP_BALBcJ_T0012357.1 MGP_BALBcJ_G0010454.1 mouse_genomes_project 10 4759984 4760627 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100413.1 MGP_BALBcJ_G0038449.1 mouse_genomes_project 10 4800308 4800429 - Gm24726 snoRNA snoRNA MGP_BALBcJ_T0027470.1 MGP_BALBcJ_G0017811.1 mouse_genomes_project 10 127371912 127380081 - MGP_BALBcJ_P0027470 Pa2g4 protein_coding protein_coding MGP_BALBcJ_T0027471.1 MGP_BALBcJ_G0017811.1 mouse_genomes_project 10 127373584 127379974 - MGP_BALBcJ_P0027471 Pa2g4 protein_coding protein_coding MGP_BALBcJ_T0027472.1 MGP_BALBcJ_G0017811.1 mouse_genomes_project 10 127377298 127380016 - Pa2g4 protein_coding retained_intron MGP_BALBcJ_T0025471.1 MGP_BALBcJ_G0017258.1 mouse_genomes_project 10 64721463 64813550 - MGP_BALBcJ_P0025471 Reep3 protein_coding protein_coding MGP_BALBcJ_T0027171.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118854770 118856381 + Tmbim4 protein_coding processed_transcript MGP_BALBcJ_T0027172.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118854792 118856374 + Tmbim4 protein_coding processed_transcript MGP_BALBcJ_T0027173.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118854838 118870527 + MGP_BALBcJ_P0027173 Tmbim4 protein_coding protein_coding MGP_BALBcJ_T0027174.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118855831 118856374 + Tmbim4 protein_coding processed_transcript MGP_BALBcJ_T0027175.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118861856 118878007 + MGP_BALBcJ_P0027175 Tmbim4 protein_coding protein_coding MGP_BALBcJ_T0027176.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118861886 118870682 + MGP_BALBcJ_P0027176 Tmbim4 protein_coding protein_coding MGP_BALBcJ_T0027177.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118861899 118877929 + MGP_BALBcJ_P0027177 Tmbim4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027178.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118873980 118877829 + Tmbim4 protein_coding retained_intron MGP_BALBcJ_T0027179.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118875128 118877362 + Tmbim4 protein_coding retained_intron MGP_BALBcJ_T0027180.1 MGP_BALBcJ_G0017712.1 mouse_genomes_project 10 118875128 118878007 + Tmbim4 protein_coding retained_intron MGP_BALBcJ_T0026430.1 MGP_BALBcJ_G0017499.1 mouse_genomes_project 10 79420341 79453256 - MGP_BALBcJ_P0026430 Nfic protein_coding protein_coding MGP_BALBcJ_T0026431.1 MGP_BALBcJ_G0017499.1 mouse_genomes_project 10 79423293 79453242 - MGP_BALBcJ_P0026431 Nfic protein_coding protein_coding MGP_BALBcJ_T0026432.1 MGP_BALBcJ_G0017499.1 mouse_genomes_project 10 79423293 79453183 - MGP_BALBcJ_P0026432 Nfic protein_coding protein_coding MGP_BALBcJ_T0026433.1 MGP_BALBcJ_G0017499.1 mouse_genomes_project 10 79423351 79424710 - Nfic protein_coding processed_transcript MGP_BALBcJ_T0026434.1 MGP_BALBcJ_G0017499.1 mouse_genomes_project 10 79424924 79431797 - MGP_BALBcJ_P0026434 Nfic protein_coding protein_coding MGP_BALBcJ_T0026435.1 MGP_BALBcJ_G0017499.1 mouse_genomes_project 10 79425108 79458023 - MGP_BALBcJ_P0026435 Nfic protein_coding protein_coding MGP_BALBcJ_T0102119.1 MGP_BALBcJ_G0039936.1 mouse_genomes_project 10 127858815 127859745 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006100.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90448829 90480479 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006101.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90448835 90449510 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006102.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90448923 90480332 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006103.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90452821 90453328 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006104.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90459410 90540291 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006105.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90459410 90540705 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006106.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90461551 90540209 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006107.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90510885 90540702 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006108.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90512596 90513912 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006109.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90512616 90538706 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006110.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90512642 90540506 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006112.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90537666 90537726 - Rmst lincRNA misc_RNA MGP_BALBcJ_T0006113.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90537666 90538324 - Rmst lincRNA lincRNA MGP_BALBcJ_T0006114.1 MGP_BALBcJ_G0005107.1 mouse_genomes_project 10 90537709 90540705 - Rmst lincRNA lincRNA MGP_BALBcJ_T0026080.1 MGP_BALBcJ_G0017413.1 mouse_genomes_project 10 77943464 77952526 + MGP_BALBcJ_P0026080 Wdr18 protein_coding protein_coding MGP_BALBcJ_T0027294.1 MGP_BALBcJ_G0017755.1 mouse_genomes_project 10 126047932 126053447 + MGP_BALBcJ_P0027294 Ddit3 protein_coding protein_coding MGP_BALBcJ_T0027295.1 MGP_BALBcJ_G0017755.1 mouse_genomes_project 10 126047951 126053224 + MGP_BALBcJ_P0027295 Ddit3 protein_coding protein_coding MGP_BALBcJ_T0027296.1 MGP_BALBcJ_G0017755.1 mouse_genomes_project 10 126047952 126051741 + Ddit3 protein_coding retained_intron MGP_BALBcJ_T0025940.1 MGP_BALBcJ_G0017365.1 mouse_genomes_project 10 76457569 76467299 + MGP_BALBcJ_P0025940 Ilvbl protein_coding unknown_likely_coding MGP_BALBcJ_T0003041.1 MGP_BALBcJ_G0002842.1 mouse_genomes_project 10 79034494 79035968 + Gm16099 antisense antisense MGP_BALBcJ_T0003042.1 MGP_BALBcJ_G0002842.1 mouse_genomes_project 10 79034766 79036262 + Gm16099 antisense antisense MGP_BALBcJ_T0012359.1 MGP_BALBcJ_G0010456.1 mouse_genomes_project 10 8387079 8387808 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012422.1 MGP_BALBcJ_G0010519.1 mouse_genomes_project 10 126070889 126071933 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025491.1 MGP_BALBcJ_G0017262.1 mouse_genomes_project 10 65263215 65267661 - MGP_BALBcJ_P0025491 Ado protein_coding protein_coding MGP_BALBcJ_T0006125.1 MGP_BALBcJ_G0005117.1 mouse_genomes_project 10 109996019 109997107 - Gm28592 lincRNA lincRNA MGP_BALBcJ_T0100443.1 MGP_BALBcJ_G0038479.1 mouse_genomes_project 10 56716164 56716291 + Gm23223 snoRNA snoRNA MGP_BALBcJ_T0027501.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127730343 127736019 - MGP_BALBcJ_P0027501 protein_coding unknown_likely_coding MGP_BALBcJ_T0027502.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127730571 127734806 - MGP_BALBcJ_P0027502 protein_coding protein_coding MGP_BALBcJ_T0027503.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127730600 127731378 - protein_coding retained_intron MGP_BALBcJ_T0027504.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127730979 127736026 - MGP_BALBcJ_P0027504 protein_coding protein_coding MGP_BALBcJ_T0027505.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127734054 127736051 - protein_coding retained_intron MGP_BALBcJ_T0027507.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127734677 127735459 - MGP_BALBcJ_P0027507 protein_coding protein_coding MGP_BALBcJ_T0027508.1 MGP_BALBcJ_G0017828.1 mouse_genomes_project 10 127735173 127739642 - MGP_BALBcJ_P0027508 protein_coding protein_coding MGP_BALBcJ_T0099195.1 MGP_BALBcJ_G0037231.1 mouse_genomes_project 10 63863196 63863302 - Gm22829 snRNA snRNA MGP_BALBcJ_T0025764.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74052960 74059029 - MGP_BALBcJ_P0025764 Dip2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025765.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74056256 74140247 - MGP_BALBcJ_P0025765 Dip2a protein_coding protein_coding MGP_BALBcJ_T0025766.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74056554 74079325 - Dip2a protein_coding retained_intron MGP_BALBcJ_T0025767.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74056571 74140247 - MGP_BALBcJ_P0025767 Dip2a protein_coding protein_coding MGP_BALBcJ_T0025768.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74056571 74140216 - MGP_BALBcJ_P0025768 Dip2a protein_coding protein_coding MGP_BALBcJ_T0025769.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74058192 74064092 - Dip2a protein_coding retained_intron MGP_BALBcJ_T0025770.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74076074 74085927 - MGP_BALBcJ_P0025770 Dip2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025771.1 MGP_BALBcJ_G0017317.1 mouse_genomes_project 10 74088744 74140188 - Dip2a protein_coding retained_intron MGP_BALBcJ_T0012363.1 MGP_BALBcJ_G0010460.1 mouse_genomes_project 10 17751704 17755646 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026391.1 MGP_BALBcJ_G0017490.1 mouse_genomes_project 10 79344342 79349491 + MGP_BALBcJ_P0026391 Cactin protein_coding protein_coding MGP_BALBcJ_T0099215.1 MGP_BALBcJ_G0037251.1 mouse_genomes_project 10 103367921 103368026 - Gm25522 snRNA snRNA MGP_BALBcJ_T0026579.1 MGP_BALBcJ_G0017533.1 mouse_genomes_project 10 82588456 82660428 - MGP_BALBcJ_P0026579 Nuak1 protein_coding protein_coding MGP_BALBcJ_T0026580.1 MGP_BALBcJ_G0017533.1 mouse_genomes_project 10 82592847 82611352 - MGP_BALBcJ_P0026580 Nuak1 protein_coding protein_coding MGP_BALBcJ_T0026984.1 MGP_BALBcJ_G0017646.1 mouse_genomes_project 10 104931364 105400913 + MGP_BALBcJ_P0026984 Ppfia2 protein_coding protein_coding MGP_BALBcJ_T0026985.1 MGP_BALBcJ_G0017646.1 mouse_genomes_project 10 104931400 105242065 + MGP_BALBcJ_P0026985 Ppfia2 protein_coding protein_coding MGP_BALBcJ_T0026017.1 MGP_BALBcJ_G0017397.1 mouse_genomes_project 10 77734472 77736315 + MGP_BALBcJ_P0026017 Fgf22 protein_coding protein_coding MGP_BALBcJ_T0025326.1 MGP_BALBcJ_G0017223.1 mouse_genomes_project 10 59284502 59297488 + MGP_BALBcJ_P0025326 Sar1a protein_coding protein_coding MGP_BALBcJ_T0006051.1 MGP_BALBcJ_G0005068.1 mouse_genomes_project 10 15366283 15369238 + Gm10827 lincRNA lincRNA MGP_BALBcJ_T0024745.1 MGP_BALBcJ_G0017027.1 mouse_genomes_project 10 21467122 21469757 + MGP_BALBcJ_P0024745 Taar8a protein_coding protein_coding MGP_BALBcJ_T0024947.1 MGP_BALBcJ_G0017101.1 mouse_genomes_project 10 37824273 37832854 - MGP_BALBcJ_P0024947 Gtf3c6 protein_coding protein_coding MGP_BALBcJ_T0011252.1 MGP_BALBcJ_G0009377.1 mouse_genomes_project 10 73212986 73213309 + Gm25545 misc_RNA misc_RNA MGP_BALBcJ_T0099168.1 MGP_BALBcJ_G0037204.1 mouse_genomes_project 10 9787108 9787208 - Gm23044 snRNA snRNA MGP_BALBcJ_T0026599.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83623961 83909205 + MGP_BALBcJ_P0026599 Btbd11 protein_coding protein_coding MGP_BALBcJ_T0026600.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83623974 83885896 + MGP_BALBcJ_P0026600 Btbd11 protein_coding protein_coding MGP_BALBcJ_T0026601.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83835888 83909205 + MGP_BALBcJ_P0026601 Btbd11 protein_coding protein_coding MGP_BALBcJ_T0026602.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83835898 83843513 + Btbd11 protein_coding processed_transcript MGP_BALBcJ_T0026603.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83874833 83886935 + Btbd11 protein_coding retained_intron MGP_BALBcJ_T0026604.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83884874 83909202 + Btbd11 protein_coding processed_transcript MGP_BALBcJ_T0026605.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83890512 83909205 + Btbd11 protein_coding retained_intron MGP_BALBcJ_T0026606.1 MGP_BALBcJ_G0017544.1 mouse_genomes_project 10 83899492 83907173 + Btbd11 protein_coding retained_intron MGP_BALBcJ_T0009565.1 MGP_BALBcJ_G0007690.1 mouse_genomes_project 10 59806567 59806628 - Mir7662 miRNA miRNA MGP_BALBcJ_T0024674.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17520320 17843835 - MGP_BALBcJ_P0024674 Pde7b protein_coding protein_coding MGP_BALBcJ_T0024675.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17521244 17673331 - MGP_BALBcJ_P0024675 Pde7b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024676.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17522734 17843453 - MGP_BALBcJ_P0024676 Pde7b protein_coding protein_coding MGP_BALBcJ_T0024677.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17522734 17673331 - MGP_BALBcJ_P0024677 Pde7b protein_coding protein_coding MGP_BALBcJ_T0024678.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17529275 17673473 - MGP_BALBcJ_P0024678 Pde7b protein_coding protein_coding MGP_BALBcJ_T0024679.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17603323 17843789 - Pde7b protein_coding retained_intron MGP_BALBcJ_T0024680.1 MGP_BALBcJ_G0016992.1 mouse_genomes_project 10 17742978 17843789 - Pde7b protein_coding retained_intron MGP_BALBcJ_T0026562.1 MGP_BALBcJ_G0017530.1 mouse_genomes_project 10 81755528 81811210 + MGP_BALBcJ_P0026562 A230046K03Rik protein_coding protein_coding MGP_BALBcJ_T0026563.1 MGP_BALBcJ_G0017530.1 mouse_genomes_project 10 81755629 81811220 + MGP_BALBcJ_P0026563 A230046K03Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0025218.1 MGP_BALBcJ_G0017196.1 mouse_genomes_project 10 56968505 57141115 - MGP_BALBcJ_P0025218 Mcu protein_coding protein_coding MGP_BALBcJ_T0025219.1 MGP_BALBcJ_G0017196.1 mouse_genomes_project 10 56970117 56980126 - MGP_BALBcJ_P0025219 Mcu protein_coding protein_coding MGP_BALBcJ_T0025220.1 MGP_BALBcJ_G0017196.1 mouse_genomes_project 10 57055968 57141098 - MGP_BALBcJ_P0025220 Mcu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025221.1 MGP_BALBcJ_G0017196.1 mouse_genomes_project 10 57126087 57141102 - Mcu protein_coding processed_transcript MGP_BALBcJ_T0025222.1 MGP_BALBcJ_G0017196.1 mouse_genomes_project 10 57126851 57141078 - Mcu protein_coding processed_transcript MGP_BALBcJ_T0025876.1 MGP_BALBcJ_G0017350.1 mouse_genomes_project 10 75764467 75769429 - MGP_BALBcJ_P0025876 Lrrc3 protein_coding protein_coding MGP_BALBcJ_T0099203.1 MGP_BALBcJ_G0037239.1 mouse_genomes_project 10 82838001 82838096 + Gm25657 snRNA snRNA MGP_BALBcJ_T0009545.1 MGP_BALBcJ_G0007670.1 mouse_genomes_project 10 8931601 8931690 + Gm22194 miRNA miRNA MGP_BALBcJ_T0027139.1 MGP_BALBcJ_G0017705.1 mouse_genomes_project 10 116833169 116838280 + MGP_BALBcJ_P0027139 Il22 protein_coding protein_coding MGP_BALBcJ_T0027140.1 MGP_BALBcJ_G0017705.1 mouse_genomes_project 10 116835038 116838276 + Il22 protein_coding retained_intron MGP_BALBcJ_T0025595.1 MGP_BALBcJ_G0017279.1 mouse_genomes_project 10 68963469 68976512 - MGP_BALBcJ_P0025595 Tfam protein_coding protein_coding MGP_BALBcJ_T0025596.1 MGP_BALBcJ_G0017279.1 mouse_genomes_project 10 68966456 68973893 - Tfam protein_coding processed_transcript MGP_BALBcJ_T0025597.1 MGP_BALBcJ_G0017279.1 mouse_genomes_project 10 68966467 68976852 - MGP_BALBcJ_P0025597 Tfam protein_coding protein_coding MGP_BALBcJ_T0025598.1 MGP_BALBcJ_G0017279.1 mouse_genomes_project 10 68967126 68975614 - MGP_BALBcJ_P0025598 Tfam protein_coding protein_coding MGP_BALBcJ_T0024963.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39069620 39080339 + MGP_BALBcJ_P0024963 Mical1 protein_coding protein_coding MGP_BALBcJ_T0024964.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39069620 39080337 + MGP_BALBcJ_P0024964 Mical1 protein_coding protein_coding MGP_BALBcJ_T0024965.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39069642 39078532 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024966.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39069674 39080339 + MGP_BALBcJ_P0024966 Mical1 protein_coding protein_coding MGP_BALBcJ_T0024967.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39069683 39080339 + MGP_BALBcJ_P0024967 Mical1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024968.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39070385 39071492 + MGP_BALBcJ_P0024968 Mical1 protein_coding protein_coding MGP_BALBcJ_T0024969.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39071784 39074472 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024970.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39073294 39074465 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024971.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39075013 39076023 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024972.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39077380 39078378 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024974.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39079417 39080027 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024975.1 MGP_BALBcJ_G0017112.1 mouse_genomes_project 10 39079678 39080337 + Mical1 protein_coding retained_intron MGP_BALBcJ_T0024940.1 MGP_BALBcJ_G0017099.1 mouse_genomes_project 10 37608894 37717535 - MGP_BALBcJ_P0024940 Slc16a10 protein_coding protein_coding MGP_BALBcJ_T0026113.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78101146 78115834 + MGP_BALBcJ_P0026113 Stk11 protein_coding protein_coding MGP_BALBcJ_T0026114.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78101158 78115825 + MGP_BALBcJ_P0026114 Stk11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026115.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78101158 78116038 + MGP_BALBcJ_P0026115 Stk11 protein_coding protein_coding MGP_BALBcJ_T0026116.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78101702 78115826 + MGP_BALBcJ_P0026116 Stk11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026117.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78101709 78103170 + Stk11 protein_coding processed_transcript MGP_BALBcJ_T0026118.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78110174 78115331 + Stk11 protein_coding retained_intron MGP_BALBcJ_T0026119.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78110730 78111865 + Stk11 protein_coding retained_intron MGP_BALBcJ_T0026120.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78111741 78113555 + Stk11 protein_coding retained_intron MGP_BALBcJ_T0026121.1 MGP_BALBcJ_G0017422.1 mouse_genomes_project 10 78112037 78115826 + MGP_BALBcJ_P0026121 Stk11 protein_coding protein_coding MGP_BALBcJ_T0026836.1 MGP_BALBcJ_G0017597.1 mouse_genomes_project 10 91975429 91989396 + MGP_BALBcJ_P0026836 4933408J17Rik protein_coding protein_coding MGP_BALBcJ_T0025732.1 MGP_BALBcJ_G0017303.1 mouse_genomes_project 10 73589977 73599950 - MGP_BALBcJ_P0025732 Gstt4 protein_coding protein_coding MGP_BALBcJ_T0025733.1 MGP_BALBcJ_G0017303.1 mouse_genomes_project 10 73589978 73599934 - MGP_BALBcJ_P0025733 Gstt4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027570.1 MGP_BALBcJ_G0017873.1 mouse_genomes_project 10 128759191 128763169 - MGP_BALBcJ_P0027570 Olfr812 protein_coding protein_coding MGP_BALBcJ_T0027571.1 MGP_BALBcJ_G0017873.1 mouse_genomes_project 10 128759191 128760234 - MGP_BALBcJ_P0027571 Olfr812 protein_coding protein_coding MGP_BALBcJ_T0000827.1 MGP_BALBcJ_G0000759.1 mouse_genomes_project 10 116635957 116636307 + TEC TEC MGP_BALBcJ_T0026922.1 MGP_BALBcJ_G0017628.1 mouse_genomes_project 10 97563013 97564172 - MGP_BALBcJ_P0026922 Phxr2 protein_coding protein_coding MGP_BALBcJ_T0027027.1 MGP_BALBcJ_G0017663.1 mouse_genomes_project 10 109995730 109998090 + MGP_BALBcJ_P0027027 Phlda1 protein_coding protein_coding MGP_BALBcJ_T0027028.1 MGP_BALBcJ_G0017663.1 mouse_genomes_project 10 109997140 109997610 + Phlda1 protein_coding processed_transcript MGP_BALBcJ_T0025320.1 MGP_BALBcJ_G0017220.1 mouse_genomes_project 10 59081304 59185867 + MGP_BALBcJ_P0025320 Lrrc20 protein_coding protein_coding MGP_BALBcJ_T0027568.1 MGP_BALBcJ_G0017871.1 mouse_genomes_project 10 128707824 128708830 - MGP_BALBcJ_P0027568 Olfr810 protein_coding protein_coding MGP_BALBcJ_T0099194.1 MGP_BALBcJ_G0037230.1 mouse_genomes_project 10 61955274 61955382 - Gm23854 snRNA snRNA MGP_BALBcJ_T0003087.1 MGP_BALBcJ_G0002873.1 mouse_genomes_project 10 126368995 126370308 + Gm16217 antisense antisense MGP_BALBcJ_T0026977.1 MGP_BALBcJ_G0017644.1 mouse_genomes_project 10 104260910 104335426 - MGP_BALBcJ_P0026977 Mettl25 protein_coding protein_coding MGP_BALBcJ_T0026978.1 MGP_BALBcJ_G0017644.1 mouse_genomes_project 10 104260976 104335428 - MGP_BALBcJ_P0026978 Mettl25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026979.1 MGP_BALBcJ_G0017644.1 mouse_genomes_project 10 104320620 104335419 - MGP_BALBcJ_P0026979 Mettl25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026980.1 MGP_BALBcJ_G0017644.1 mouse_genomes_project 10 104333252 104335259 - Mettl25 protein_coding processed_transcript MGP_BALBcJ_T0099197.1 MGP_BALBcJ_G0037233.1 mouse_genomes_project 10 73385837 73385950 - Gm26402 snRNA snRNA MGP_BALBcJ_T0024468.1 MGP_BALBcJ_G0016936.1 mouse_genomes_project 10 4744357 4774992 + MGP_BALBcJ_P0024468 Ppil4 protein_coding protein_coding MGP_BALBcJ_T0024469.1 MGP_BALBcJ_G0016936.1 mouse_genomes_project 10 4744374 4759237 + Ppil4 protein_coding retained_intron MGP_BALBcJ_T0024470.1 MGP_BALBcJ_G0016936.1 mouse_genomes_project 10 4744387 4764738 + MGP_BALBcJ_P0024470 Ppil4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024471.1 MGP_BALBcJ_G0016936.1 mouse_genomes_project 10 4751374 4757267 + Ppil4 protein_coding retained_intron MGP_BALBcJ_T0027364.1 MGP_BALBcJ_G0017774.1 mouse_genomes_project 10 126533326 126542104 + MGP_BALBcJ_P0027364 protein_coding protein_coding MGP_BALBcJ_T0026338.1 MGP_BALBcJ_G0017477.1 mouse_genomes_project 10 79147243 79156525 + MGP_BALBcJ_P0026338 Zbtb7a protein_coding protein_coding MGP_BALBcJ_T0026339.1 MGP_BALBcJ_G0017477.1 mouse_genomes_project 10 79148294 79164531 + MGP_BALBcJ_P0026339 Zbtb7a protein_coding protein_coding MGP_BALBcJ_T0026340.1 MGP_BALBcJ_G0017477.1 mouse_genomes_project 10 79148572 79160472 + MGP_BALBcJ_P0026340 Zbtb7a protein_coding protein_coding MGP_BALBcJ_T0026341.1 MGP_BALBcJ_G0017477.1 mouse_genomes_project 10 79148589 79156136 + MGP_BALBcJ_P0026341 Zbtb7a protein_coding protein_coding MGP_BALBcJ_T0026342.1 MGP_BALBcJ_G0017477.1 mouse_genomes_project 10 79148601 79165304 + MGP_BALBcJ_P0026342 Zbtb7a protein_coding protein_coding MGP_BALBcJ_T0026343.1 MGP_BALBcJ_G0017477.1 mouse_genomes_project 10 79149985 79160487 + MGP_BALBcJ_P0026343 Zbtb7a protein_coding protein_coding MGP_BALBcJ_T0098441.1 MGP_BALBcJ_G0036495.1 mouse_genomes_project 10 812371 812480 - Gm23023 rRNA rRNA MGP_BALBcJ_T0027577.1 MGP_BALBcJ_G0017877.1 mouse_genomes_project 10 128903538 128906277 - MGP_BALBcJ_P0027577 protein_coding protein_coding MGP_BALBcJ_T0026998.1 MGP_BALBcJ_G0017655.1 mouse_genomes_project 10 106980536 107497775 - MGP_BALBcJ_P0026998 Syt1 protein_coding protein_coding MGP_BALBcJ_T0026999.1 MGP_BALBcJ_G0017655.1 mouse_genomes_project 10 106980538 107497782 - MGP_BALBcJ_P0026999 Syt1 protein_coding protein_coding MGP_BALBcJ_T0027000.1 MGP_BALBcJ_G0017655.1 mouse_genomes_project 10 107111913 107121583 - Syt1 protein_coding retained_intron MGP_BALBcJ_T0027001.1 MGP_BALBcJ_G0017655.1 mouse_genomes_project 10 107111969 107495914 - MGP_BALBcJ_P0027001 Syt1 protein_coding protein_coding MGP_BALBcJ_T0027002.1 MGP_BALBcJ_G0017655.1 mouse_genomes_project 10 107384812 107497762 - Syt1 protein_coding retained_intron MGP_BALBcJ_T0027003.1 MGP_BALBcJ_G0017655.1 mouse_genomes_project 10 107385029 107495903 - Syt1 protein_coding retained_intron MGP_BALBcJ_T0000820.1 MGP_BALBcJ_G0000752.1 mouse_genomes_project 10 99237118 99237882 - TEC TEC MGP_BALBcJ_T0011261.1 MGP_BALBcJ_G0009386.1 mouse_genomes_project 10 90513304 90513413 - Gm27419 misc_RNA misc_RNA MGP_BALBcJ_T0100442.1 MGP_BALBcJ_G0038478.1 mouse_genomes_project 10 56229571 56229647 - Gm25055 snoRNA snoRNA MGP_BALBcJ_T0099189.1 MGP_BALBcJ_G0037225.1 mouse_genomes_project 10 52065654 52065761 - Gm26177 snRNA snRNA MGP_BALBcJ_T0027096.1 MGP_BALBcJ_G0017687.1 mouse_genomes_project 10 115497276 115542911 - MGP_BALBcJ_P0027096 Rab3ip protein_coding protein_coding MGP_BALBcJ_T0027097.1 MGP_BALBcJ_G0017687.1 mouse_genomes_project 10 115498528 115542944 - MGP_BALBcJ_P0027097 Rab3ip protein_coding unknown_likely_coding MGP_BALBcJ_T0025406.1 MGP_BALBcJ_G0017241.1 mouse_genomes_project 10 60241151 60276490 - MGP_BALBcJ_P0025406 Ddx50 protein_coding protein_coding MGP_BALBcJ_T0025407.1 MGP_BALBcJ_G0017241.1 mouse_genomes_project 10 60241366 60272943 - MGP_BALBcJ_P0025407 Ddx50 protein_coding unknown_likely_coding MGP_BALBcJ_T0100420.1 MGP_BALBcJ_G0038456.1 mouse_genomes_project 10 9363430 9363640 + Gm25139 snoRNA snoRNA MGP_BALBcJ_T0027021.1 MGP_BALBcJ_G0017659.1 mouse_genomes_project 10 109413686 109479876 - MGP_BALBcJ_P0027021 Zdhhc17 protein_coding protein_coding MGP_BALBcJ_T0027022.1 MGP_BALBcJ_G0017659.1 mouse_genomes_project 10 109434110 109479813 - MGP_BALBcJ_P0027022 Zdhhc17 protein_coding protein_coding MGP_BALBcJ_T0024550.1 MGP_BALBcJ_G0016955.1 mouse_genomes_project 10 10148820 10177160 - MGP_BALBcJ_P0024550 Zc2hc1b protein_coding protein_coding MGP_BALBcJ_T0026419.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79408583 79412508 + MGP_BALBcJ_P0026419 Dohh protein_coding protein_coding MGP_BALBcJ_T0026420.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79408614 79411607 + MGP_BALBcJ_P0026420 Dohh protein_coding protein_coding MGP_BALBcJ_T0026421.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79408621 79415716 + MGP_BALBcJ_P0026421 Dohh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026422.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79408622 79410257 + Dohh protein_coding retained_intron MGP_BALBcJ_T0026423.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79409050 79410150 + MGP_BALBcJ_P0026423 Dohh protein_coding protein_coding MGP_BALBcJ_T0026424.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79409776 79411837 + MGP_BALBcJ_P0026424 Dohh protein_coding protein_coding MGP_BALBcJ_T0026425.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79411472 79415014 + MGP_BALBcJ_P0026425 Dohh protein_coding protein_coding MGP_BALBcJ_T0026426.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79413160 79415423 + Dohh protein_coding processed_transcript MGP_BALBcJ_T0026427.1 MGP_BALBcJ_G0017497.1 mouse_genomes_project 10 79414484 79415291 + Dohh protein_coding retained_intron MGP_BALBcJ_T0027050.1 MGP_BALBcJ_G0017673.1 mouse_genomes_project 10 113762871 113817480 - MGP_BALBcJ_P0027050 Tbc1d15 protein_coding protein_coding MGP_BALBcJ_T0100466.1 MGP_BALBcJ_G0038502.1 mouse_genomes_project 10 109365048 109365170 - Gm22186 snoRNA snoRNA MGP_BALBcJ_T0027567.1 MGP_BALBcJ_G0017870.1 mouse_genomes_project 10 128690061 128690720 + MGP_BALBcJ_P0027567 protein_coding protein_coding MGP_BALBcJ_T0099171.1 MGP_BALBcJ_G0037207.1 mouse_genomes_project 10 16898526 16898628 + Gm25256 snRNA snRNA MGP_BALBcJ_T0003003.1 MGP_BALBcJ_G0002812.1 mouse_genomes_project 10 37101520 37131365 - Gm16365 antisense antisense MGP_BALBcJ_T0003004.1 MGP_BALBcJ_G0002812.1 mouse_genomes_project 10 37103049 37156864 - Gm16365 antisense antisense MGP_BALBcJ_T0003005.1 MGP_BALBcJ_G0002812.1 mouse_genomes_project 10 37105404 37156868 - Gm16365 antisense antisense MGP_BALBcJ_T0003006.1 MGP_BALBcJ_G0002812.1 mouse_genomes_project 10 37138709 37156879 - Gm16365 antisense antisense MGP_BALBcJ_T0026820.1 MGP_BALBcJ_G0017591.1 mouse_genomes_project 10 91620963 91685210 - MGP_BALBcJ_P0026820 Elk3 protein_coding protein_coding MGP_BALBcJ_T0026821.1 MGP_BALBcJ_G0017591.1 mouse_genomes_project 10 91622847 91684860 - MGP_BALBcJ_P0026821 Elk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026822.1 MGP_BALBcJ_G0017591.1 mouse_genomes_project 10 91622847 91685044 - MGP_BALBcJ_P0026822 Elk3 protein_coding protein_coding MGP_BALBcJ_T0026823.1 MGP_BALBcJ_G0017591.1 mouse_genomes_project 10 91657722 91685210 - Elk3 protein_coding retained_intron MGP_BALBcJ_T0098445.1 MGP_BALBcJ_G0036499.1 mouse_genomes_project 10 39009907 39010012 - Gm27783 rRNA rRNA MGP_BALBcJ_T0006061.1 MGP_BALBcJ_G0005075.1 mouse_genomes_project 10 31730178 31733174 - Gm26564 lincRNA lincRNA MGP_BALBcJ_T0025064.1 MGP_BALBcJ_G0017133.1 mouse_genomes_project 10 41161870 41178623 - MGP_BALBcJ_P0025064 1700021F05Rik protein_coding protein_coding MGP_BALBcJ_T0025065.1 MGP_BALBcJ_G0017133.1 mouse_genomes_project 10 41161882 41178597 - MGP_BALBcJ_P0025065 1700021F05Rik protein_coding protein_coding MGP_BALBcJ_T0025066.1 MGP_BALBcJ_G0017133.1 mouse_genomes_project 10 41161908 41162593 - 1700021F05Rik protein_coding processed_transcript MGP_BALBcJ_T0025067.1 MGP_BALBcJ_G0017133.1 mouse_genomes_project 10 41170834 41178623 - 1700021F05Rik protein_coding processed_transcript MGP_BALBcJ_T0026359.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79254741 79274434 + MGP_BALBcJ_P0026359 Zfr2 protein_coding protein_coding MGP_BALBcJ_T0026360.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79254741 79259140 + MGP_BALBcJ_P0026360 Zfr2 protein_coding protein_coding MGP_BALBcJ_T0026361.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79254762 79259164 + Zfr2 protein_coding processed_transcript MGP_BALBcJ_T0026362.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79254762 79264733 + Zfr2 protein_coding retained_intron MGP_BALBcJ_T0026363.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79254773 79274432 + Zfr2 protein_coding retained_intron MGP_BALBcJ_T0026364.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79270726 79274023 + MGP_BALBcJ_P0026364 Zfr2 protein_coding protein_coding MGP_BALBcJ_T0026365.1 MGP_BALBcJ_G0017484.1 mouse_genomes_project 10 79271361 79272857 + Zfr2 protein_coding retained_intron MGP_BALBcJ_T0027135.1 MGP_BALBcJ_G0017704.1 mouse_genomes_project 10 116768299 116795647 + MGP_BALBcJ_P0027135 Mdm1 protein_coding protein_coding MGP_BALBcJ_T0027136.1 MGP_BALBcJ_G0017704.1 mouse_genomes_project 10 116768299 116795647 + MGP_BALBcJ_P0027136 Mdm1 protein_coding protein_coding MGP_BALBcJ_T0027137.1 MGP_BALBcJ_G0017704.1 mouse_genomes_project 10 116768299 116795647 + MGP_BALBcJ_P0027137 Mdm1 protein_coding protein_coding MGP_BALBcJ_T0027138.1 MGP_BALBcJ_G0017704.1 mouse_genomes_project 10 116768299 116795647 + MGP_BALBcJ_P0027138 Mdm1 protein_coding protein_coding MGP_BALBcJ_T0027051.1 MGP_BALBcJ_G0017674.1 mouse_genomes_project 10 113858075 113884100 - MGP_BALBcJ_P0027051 Rab21 protein_coding protein_coding MGP_BALBcJ_T0027303.1 MGP_BALBcJ_G0017757.1 mouse_genomes_project 10 126083207 126089418 + MGP_BALBcJ_P0027303 Arhgap9 protein_coding protein_coding MGP_BALBcJ_T0099223.1 MGP_BALBcJ_G0037259.1 mouse_genomes_project 10 125894288 125894377 - Gm23664 snRNA snRNA MGP_BALBcJ_T0027236.1 MGP_BALBcJ_G0017736.1 mouse_genomes_project 10 125724071 125751455 + MGP_BALBcJ_P0027236 Ctdsp2 protein_coding protein_coding MGP_BALBcJ_T0027237.1 MGP_BALBcJ_G0017736.1 mouse_genomes_project 10 125742635 125751453 + MGP_BALBcJ_P0027237 Ctdsp2 protein_coding protein_coding MGP_BALBcJ_T0099204.1 MGP_BALBcJ_G0037240.1 mouse_genomes_project 10 83032314 83032411 - Gm24226 snRNA snRNA MGP_BALBcJ_T0027130.1 MGP_BALBcJ_G0017701.1 mouse_genomes_project 10 116355148 116368182 - MGP_BALBcJ_P0027130 Slc35e3 protein_coding unknown_likely_coding MGP_BALBcJ_T0027131.1 MGP_BALBcJ_G0017701.1 mouse_genomes_project 10 116355180 116368437 - MGP_BALBcJ_P0027131 Slc35e3 protein_coding protein_coding MGP_BALBcJ_T0024387.1 MGP_BALBcJ_G0016924.1 mouse_genomes_project 10 2737321 2828492 - MGP_BALBcJ_P0024387 Rgs17 protein_coding protein_coding MGP_BALBcJ_T0024388.1 MGP_BALBcJ_G0016924.1 mouse_genomes_project 10 2737321 2828478 - MGP_BALBcJ_P0024388 Rgs17 protein_coding protein_coding MGP_BALBcJ_T0024389.1 MGP_BALBcJ_G0016924.1 mouse_genomes_project 10 2743838 2828458 - MGP_BALBcJ_P0024389 Rgs17 protein_coding protein_coding MGP_BALBcJ_T0024390.1 MGP_BALBcJ_G0016924.1 mouse_genomes_project 10 2744768 2828458 - MGP_BALBcJ_P0024390 Rgs17 protein_coding protein_coding MGP_BALBcJ_T0026801.1 MGP_BALBcJ_G0017587.1 mouse_genomes_project 10 89517974 89541982 - MGP_BALBcJ_P0026801 Tmpo protein_coding protein_coding MGP_BALBcJ_T0026802.1 MGP_BALBcJ_G0017587.1 mouse_genomes_project 10 89517974 89541982 - MGP_BALBcJ_P0026802 Tmpo protein_coding protein_coding MGP_BALBcJ_T0026803.1 MGP_BALBcJ_G0017587.1 mouse_genomes_project 10 89517974 89541982 - MGP_BALBcJ_P0026803 Tmpo protein_coding protein_coding MGP_BALBcJ_T0026804.1 MGP_BALBcJ_G0017587.1 mouse_genomes_project 10 89517974 89541982 - MGP_BALBcJ_P0026804 Tmpo protein_coding protein_coding MGP_BALBcJ_T0026805.1 MGP_BALBcJ_G0017587.1 mouse_genomes_project 10 89530824 89541982 - MGP_BALBcJ_P0026805 Tmpo protein_coding protein_coding MGP_BALBcJ_T0027575.1 MGP_BALBcJ_G0017876.1 mouse_genomes_project 10 128871844 128872801 - MGP_BALBcJ_P0027575 Olfr818 protein_coding protein_coding MGP_BALBcJ_T0027576.1 MGP_BALBcJ_G0017876.1 mouse_genomes_project 10 128872086 128876537 - MGP_BALBcJ_P0027576 Olfr818 protein_coding protein_coding MGP_BALBcJ_T0024839.1 MGP_BALBcJ_G0017060.1 mouse_genomes_project 10 28686670 28689576 + MGP_BALBcJ_P0024839 Gm5422 protein_coding protein_coding MGP_BALBcJ_T0026022.1 MGP_BALBcJ_G0017400.1 mouse_genomes_project 10 77761009 77768479 - MGP_BALBcJ_P0026022 Prss57 protein_coding protein_coding MGP_BALBcJ_T0026023.1 MGP_BALBcJ_G0017400.1 mouse_genomes_project 10 77761011 77770455 - MGP_BALBcJ_P0026023 Prss57 protein_coding protein_coding MGP_BALBcJ_T0026024.1 MGP_BALBcJ_G0017400.1 mouse_genomes_project 10 77762453 77764089 - MGP_BALBcJ_P0026024 Prss57 protein_coding protein_coding MGP_BALBcJ_T0026025.1 MGP_BALBcJ_G0017400.1 mouse_genomes_project 10 77762631 77764107 - MGP_BALBcJ_P0026025 Prss57 protein_coding protein_coding MGP_BALBcJ_T0003052.1 MGP_BALBcJ_G0002849.1 mouse_genomes_project 10 81353380 81356269 - 1700025N21Rik antisense antisense MGP_BALBcJ_T0024930.1 MGP_BALBcJ_G0017094.1 mouse_genomes_project 10 37454838 37460298 - MGP_BALBcJ_P0024930 Mfsd4b4 protein_coding protein_coding MGP_BALBcJ_T0024831.1 MGP_BALBcJ_G0017056.1 mouse_genomes_project 10 27975322 28046146 - MGP_BALBcJ_P0024831 Trmt11 protein_coding protein_coding MGP_BALBcJ_T0026625.1 MGP_BALBcJ_G0017551.1 mouse_genomes_project 10 84335244 84773304 - MGP_BALBcJ_P0026625 Syn3 protein_coding protein_coding MGP_BALBcJ_T0026626.1 MGP_BALBcJ_G0017551.1 mouse_genomes_project 10 84337542 84346959 - Syn3 protein_coding processed_transcript MGP_BALBcJ_T0026627.1 MGP_BALBcJ_G0017551.1 mouse_genomes_project 10 84350589 84766411 - Syn3 protein_coding retained_intron MGP_BALBcJ_T0026628.1 MGP_BALBcJ_G0017551.1 mouse_genomes_project 10 84564171 84773330 - MGP_BALBcJ_P0026628 Syn3 protein_coding protein_coding MGP_BALBcJ_T0026633.1 MGP_BALBcJ_G0017551.1 mouse_genomes_project 10 84620519 84766411 - Syn3 protein_coding retained_intron MGP_BALBcJ_T0026634.1 MGP_BALBcJ_G0017551.1 mouse_genomes_project 10 84623892 84773344 - Syn3 protein_coding retained_intron MGP_BALBcJ_T0003010.1 MGP_BALBcJ_G0002815.1 mouse_genomes_project 10 39343360 39350528 + BC048559 antisense antisense MGP_BALBcJ_T0025872.1 MGP_BALBcJ_G0017348.1 mouse_genomes_project 10 75688106 75689690 - MGP_BALBcJ_P0025872 Krtap10-4 protein_coding protein_coding MGP_BALBcJ_T0099162.1 MGP_BALBcJ_G0037198.1 mouse_genomes_project 10 986577 986734 + Gm25515 snRNA snRNA MGP_BALBcJ_T0100460.1 MGP_BALBcJ_G0038496.1 mouse_genomes_project 10 101657633 101657766 + Gm25376 snoRNA snoRNA MGP_BALBcJ_T0012388.1 MGP_BALBcJ_G0010485.1 mouse_genomes_project 10 50128162 50128597 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026227.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409517 78433662 - MGP_BALBcJ_P0026227 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026228.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409517 78433652 - MGP_BALBcJ_P0026228 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026229.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409550 78433658 - MGP_BALBcJ_P0026229 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026230.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409550 78433662 - MGP_BALBcJ_P0026230 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026231.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409611 78433636 - MGP_BALBcJ_P0026231 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026232.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409611 78433636 - MGP_BALBcJ_P0026232 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026233.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409623 78431025 - MGP_BALBcJ_P0026233 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026234.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409629 78433650 - MGP_BALBcJ_P0026234 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026235.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78409629 78433650 - MGP_BALBcJ_P0026235 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026236.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78410057 78431095 - MGP_BALBcJ_P0026236 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026237.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78410057 78430998 - MGP_BALBcJ_P0026237 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0026238.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78412630 78415491 - Tcf3 protein_coding processed_transcript MGP_BALBcJ_T0026239.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78415246 78416292 - Tcf3 protein_coding retained_intron MGP_BALBcJ_T0026240.1 MGP_BALBcJ_G0017443.1 mouse_genomes_project 10 78420086 78421864 - MGP_BALBcJ_P0026240 Tcf3 protein_coding protein_coding MGP_BALBcJ_T0006047.1 MGP_BALBcJ_G0005065.1 mouse_genomes_project 10 9917869 9924345 - B230208H11Rik lincRNA lincRNA MGP_BALBcJ_T0006048.1 MGP_BALBcJ_G0005065.1 mouse_genomes_project 10 9917900 9924335 - B230208H11Rik lincRNA lincRNA MGP_BALBcJ_T0003029.1 MGP_BALBcJ_G0002831.1 mouse_genomes_project 10 73773825 73775127 - Gm16220 antisense antisense MGP_BALBcJ_T0027525.1 MGP_BALBcJ_G0017839.1 mouse_genomes_project 10 128003363 128004317 - MGP_BALBcJ_P0027525 Olfr771 protein_coding protein_coding MGP_BALBcJ_T0011245.1 MGP_BALBcJ_G0009370.1 mouse_genomes_project 10 22711734 22711987 - Gm26167 misc_RNA misc_RNA MGP_BALBcJ_T0009584.1 MGP_BALBcJ_G0007709.1 mouse_genomes_project 10 79410502 79410568 + Mir6913 miRNA miRNA MGP_BALBcJ_T0026084.1 MGP_BALBcJ_G0017415.1 mouse_genomes_project 10 77958227 77962053 - Tmem259 protein_coding retained_intron MGP_BALBcJ_T0026085.1 MGP_BALBcJ_G0017415.1 mouse_genomes_project 10 77959169 77962220 - Tmem259 protein_coding retained_intron MGP_BALBcJ_T0026086.1 MGP_BALBcJ_G0017415.1 mouse_genomes_project 10 77960397 77967847 - MGP_BALBcJ_P0026086 Tmem259 protein_coding protein_coding MGP_BALBcJ_T0026087.1 MGP_BALBcJ_G0017415.1 mouse_genomes_project 10 77960637 77967312 - MGP_BALBcJ_P0026087 Tmem259 protein_coding protein_coding MGP_BALBcJ_T0026088.1 MGP_BALBcJ_G0017415.1 mouse_genomes_project 10 77961242 77962056 - Tmem259 protein_coding retained_intron MGP_BALBcJ_T0026720.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87287919 87601149 - MGP_BALBcJ_P0026720 Ano4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026721.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87287920 87600949 - MGP_BALBcJ_P0026721 Ano4 protein_coding protein_coding MGP_BALBcJ_T0026722.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87287926 87600981 - MGP_BALBcJ_P0026722 Ano4 protein_coding protein_coding MGP_BALBcJ_T0026723.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87287927 87600659 - MGP_BALBcJ_P0026723 Ano4 protein_coding protein_coding MGP_BALBcJ_T0026724.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87317234 87336087 - MGP_BALBcJ_P0026724 Ano4 protein_coding protein_coding MGP_BALBcJ_T0026725.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87330807 87364112 - Ano4 protein_coding processed_transcript MGP_BALBcJ_T0026726.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87354661 87600913 - Ano4 protein_coding retained_intron MGP_BALBcJ_T0026727.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87377737 87688209 - MGP_BALBcJ_P0026727 Ano4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026728.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87402655 87600949 - MGP_BALBcJ_P0026728 Ano4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026729.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87403207 87600495 - MGP_BALBcJ_P0026729 Ano4 protein_coding protein_coding MGP_BALBcJ_T0026730.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87423590 87659895 - MGP_BALBcJ_P0026730 Ano4 protein_coding protein_coding MGP_BALBcJ_T0026731.1 MGP_BALBcJ_G0017576.1 mouse_genomes_project 10 87678317 87688326 - Ano4 protein_coding processed_transcript MGP_BALBcJ_T0025199.1 MGP_BALBcJ_G0017185.1 mouse_genomes_project 10 55972757 56020746 + MGP_BALBcJ_P0025199 Ranbp2 protein_coding protein_coding MGP_BALBcJ_T0024878.1 MGP_BALBcJ_G0017082.1 mouse_genomes_project 10 31913780 32046090 + MGP_BALBcJ_P0024878 Frk protein_coding protein_coding MGP_BALBcJ_T0024879.1 MGP_BALBcJ_G0017082.1 mouse_genomes_project 10 31913780 32046090 + MGP_BALBcJ_P0024879 Frk protein_coding protein_coding MGP_BALBcJ_T0027193.1 MGP_BALBcJ_G0017720.1 mouse_genomes_project 10 120053956 120087139 + MGP_BALBcJ_P0027193 Gns protein_coding protein_coding MGP_BALBcJ_T0025662.1 MGP_BALBcJ_G0017286.1 mouse_genomes_project 10 72722580 72772994 + MGP_BALBcJ_P0025662 Gnaz protein_coding protein_coding MGP_BALBcJ_T0025663.1 MGP_BALBcJ_G0017286.1 mouse_genomes_project 10 72722612 72747411 + Gnaz protein_coding processed_transcript MGP_BALBcJ_T0025664.1 MGP_BALBcJ_G0017286.1 mouse_genomes_project 10 72746207 72772983 + MGP_BALBcJ_P0025664 Gnaz protein_coding protein_coding MGP_BALBcJ_T0025737.1 MGP_BALBcJ_G0017307.1 mouse_genomes_project 10 73676958 73703045 - MGP_BALBcJ_P0025737 Smarcb1 protein_coding protein_coding MGP_BALBcJ_T0025738.1 MGP_BALBcJ_G0017307.1 mouse_genomes_project 10 73676962 73694027 - Smarcb1 protein_coding retained_intron MGP_BALBcJ_T0025739.1 MGP_BALBcJ_G0017307.1 mouse_genomes_project 10 73676964 73698001 - Smarcb1 protein_coding retained_intron MGP_BALBcJ_T0025740.1 MGP_BALBcJ_G0017307.1 mouse_genomes_project 10 73676966 73703042 - MGP_BALBcJ_P0025740 Smarcb1 protein_coding protein_coding MGP_BALBcJ_T0025741.1 MGP_BALBcJ_G0017307.1 mouse_genomes_project 10 73677717 73703017 - MGP_BALBcJ_P0025741 Smarcb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025742.1 MGP_BALBcJ_G0017307.1 mouse_genomes_project 10 73690132 73696593 - MGP_BALBcJ_P0025742 Smarcb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012384.1 MGP_BALBcJ_G0010481.1 mouse_genomes_project 10 41463467 41464472 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026519.1 MGP_BALBcJ_G0017517.1 mouse_genomes_project 10 80495982 80500725 + MGP_BALBcJ_P0026519 Gm4924 protein_coding protein_coding MGP_BALBcJ_T0026732.1 MGP_BALBcJ_G0017577.1 mouse_genomes_project 10 87750957 87785571 - MGP_BALBcJ_P0026732 Gas2l3 protein_coding protein_coding MGP_BALBcJ_T0026733.1 MGP_BALBcJ_G0017577.1 mouse_genomes_project 10 87750957 87785571 - MGP_BALBcJ_P0026733 Gas2l3 protein_coding protein_coding MGP_BALBcJ_T0011268.1 MGP_BALBcJ_G0009393.1 mouse_genomes_project 10 128015689 128015994 - Gm25807 misc_RNA misc_RNA MGP_BALBcJ_T0025319.1 MGP_BALBcJ_G0017219.1 mouse_genomes_project 10 59080716 59082409 - MGP_BALBcJ_P0025319 D830039M14Rik protein_coding protein_coding MGP_BALBcJ_T0024689.1 MGP_BALBcJ_G0016997.1 mouse_genomes_project 10 18509303 18528660 + MGP_BALBcJ_P0024689 Aldh8a1 protein_coding protein_coding MGP_BALBcJ_T0024690.1 MGP_BALBcJ_G0016997.1 mouse_genomes_project 10 18509312 18517551 + Aldh8a1 protein_coding retained_intron MGP_BALBcJ_T0024691.1 MGP_BALBcJ_G0016997.1 mouse_genomes_project 10 18509359 18520943 + MGP_BALBcJ_P0024691 Aldh8a1 protein_coding protein_coding MGP_BALBcJ_T0025720.1 MGP_BALBcJ_G0017298.1 mouse_genomes_project 10 73420007 73538995 - MGP_BALBcJ_P0025720 Cabin1 protein_coding protein_coding MGP_BALBcJ_T0026307.1 MGP_BALBcJ_G0017470.1 mouse_genomes_project 10 78958052 79024644 - MGP_BALBcJ_P0026307 Gng7 protein_coding protein_coding MGP_BALBcJ_T0026308.1 MGP_BALBcJ_G0017470.1 mouse_genomes_project 10 78958052 79011043 - MGP_BALBcJ_P0026308 Gng7 protein_coding protein_coding MGP_BALBcJ_T0026309.1 MGP_BALBcJ_G0017470.1 mouse_genomes_project 10 78958052 79024624 - MGP_BALBcJ_P0026309 Gng7 protein_coding protein_coding MGP_BALBcJ_T0026310.1 MGP_BALBcJ_G0017470.1 mouse_genomes_project 10 78958057 79011056 - MGP_BALBcJ_P0026310 Gng7 protein_coding protein_coding MGP_BALBcJ_T0026311.1 MGP_BALBcJ_G0017470.1 mouse_genomes_project 10 78960615 79007873 - MGP_BALBcJ_P0026311 Gng7 protein_coding protein_coding MGP_BALBcJ_T0026312.1 MGP_BALBcJ_G0017470.1 mouse_genomes_project 10 78961140 79024612 - MGP_BALBcJ_P0026312 Gng7 protein_coding protein_coding MGP_BALBcJ_T0009600.1 MGP_BALBcJ_G0007725.1 mouse_genomes_project 10 102819309 102819417 + Mir6411 miRNA miRNA MGP_BALBcJ_T0009611.1 MGP_BALBcJ_G0007736.1 mouse_genomes_project 10 124797935 124798008 + Gm22183 miRNA miRNA MGP_BALBcJ_T0025436.1 MGP_BALBcJ_G0017248.1 mouse_genomes_project 10 60679937 60688991 - MGP_BALBcJ_P0025436 Hnrnph3 protein_coding protein_coding MGP_BALBcJ_T0025437.1 MGP_BALBcJ_G0017248.1 mouse_genomes_project 10 60679937 60688991 - MGP_BALBcJ_P0025437 Hnrnph3 protein_coding protein_coding MGP_BALBcJ_T0025438.1 MGP_BALBcJ_G0017248.1 mouse_genomes_project 10 60680701 60689314 - MGP_BALBcJ_P0025438 Hnrnph3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025439.1 MGP_BALBcJ_G0017248.1 mouse_genomes_project 10 60680704 60681442 - Hnrnph3 protein_coding retained_intron MGP_BALBcJ_T0025440.1 MGP_BALBcJ_G0017248.1 mouse_genomes_project 10 60681691 60683358 - Hnrnph3 protein_coding retained_intron MGP_BALBcJ_T0025441.1 MGP_BALBcJ_G0017248.1 mouse_genomes_project 10 60683080 60688944 - MGP_BALBcJ_P0025441 Hnrnph3 protein_coding protein_coding MGP_BALBcJ_T0027192.1 MGP_BALBcJ_G0017719.1 mouse_genomes_project 10 119947744 119996200 - MGP_BALBcJ_P0027192 Tbc1d30 protein_coding protein_coding MGP_BALBcJ_T0027458.1 MGP_BALBcJ_G0017808.1 mouse_genomes_project 10 127323237 127339551 - MGP_BALBcJ_P0027458 Esyt1 protein_coding protein_coding MGP_BALBcJ_T0026867.1 MGP_BALBcJ_G0017602.1 mouse_genomes_project 10 92421809 92532826 + MGP_BALBcJ_P0026867 Fgd6 protein_coding protein_coding MGP_BALBcJ_T0026868.1 MGP_BALBcJ_G0017602.1 mouse_genomes_project 10 92458408 92476700 + Fgd6 protein_coding processed_transcript MGP_BALBcJ_T0026869.1 MGP_BALBcJ_G0017602.1 mouse_genomes_project 10 92520394 92527325 + Fgd6 protein_coding retained_intron MGP_BALBcJ_T0024333.1 MGP_BALBcJ_G0016909.1 mouse_genomes_project 10 425428 440038 + MGP_BALBcJ_P0024333 Iyd protein_coding protein_coding MGP_BALBcJ_T0024334.1 MGP_BALBcJ_G0016909.1 mouse_genomes_project 10 425476 437236 + Iyd protein_coding retained_intron MGP_BALBcJ_T0025869.1 MGP_BALBcJ_G0017345.1 mouse_genomes_project 10 75583919 75610407 - MGP_BALBcJ_P0025869 protein_coding protein_coding MGP_BALBcJ_T0000816.1 MGP_BALBcJ_G0000749.1 mouse_genomes_project 10 82277888 82278358 + TEC TEC MGP_BALBcJ_T0006040.1 MGP_BALBcJ_G0005059.1 mouse_genomes_project 10 239567 242616 - Gm26752 lincRNA lincRNA MGP_BALBcJ_T0025252.1 MGP_BALBcJ_G0017203.1 mouse_genomes_project 10 57665489 57686585 + Spock2 protein_coding retained_intron MGP_BALBcJ_T0025253.1 MGP_BALBcJ_G0017203.1 mouse_genomes_project 10 57665489 57694384 + MGP_BALBcJ_P0025253 Spock2 protein_coding protein_coding MGP_BALBcJ_T0025254.1 MGP_BALBcJ_G0017203.1 mouse_genomes_project 10 57665738 57694390 + MGP_BALBcJ_P0025254 Spock2 protein_coding unknown_likely_coding MGP_BALBcJ_T0025255.1 MGP_BALBcJ_G0017203.1 mouse_genomes_project 10 57665738 57693094 + MGP_BALBcJ_P0025255 Spock2 protein_coding protein_coding MGP_BALBcJ_T0102115.1 MGP_BALBcJ_G0039932.1 mouse_genomes_project 10 76395328 76396266 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0024604.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15188697 15259491 + MGP_BALBcJ_P0024604 Reps1 protein_coding protein_coding MGP_BALBcJ_T0024605.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15188742 15259505 + MGP_BALBcJ_P0024605 Reps1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024606.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15188776 15259516 + MGP_BALBcJ_P0024606 Reps1 protein_coding protein_coding MGP_BALBcJ_T0024607.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15188799 15259503 + MGP_BALBcJ_P0024607 Reps1 protein_coding protein_coding MGP_BALBcJ_T0024608.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15225009 15238369 + Reps1 protein_coding retained_intron MGP_BALBcJ_T0024609.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15226711 15237530 + MGP_BALBcJ_P0024609 Reps1 protein_coding protein_coding MGP_BALBcJ_T0024610.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15228071 15251295 + MGP_BALBcJ_P0024610 Reps1 protein_coding protein_coding MGP_BALBcJ_T0024611.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15247824 15255929 + Reps1 protein_coding retained_intron MGP_BALBcJ_T0024612.1 MGP_BALBcJ_G0016971.1 mouse_genomes_project 10 15256671 15257597 + Reps1 protein_coding retained_intron MGP_BALBcJ_T0099188.1 MGP_BALBcJ_G0037224.1 mouse_genomes_project 10 50662388 50662495 + Gm25664 snRNA snRNA MGP_BALBcJ_T0024717.1 MGP_BALBcJ_G0017008.1 mouse_genomes_project 10 20039826 20091765 + MGP_BALBcJ_P0024717 Slc2a12 protein_coding protein_coding MGP_BALBcJ_T0024718.1 MGP_BALBcJ_G0017008.1 mouse_genomes_project 10 20043825 20059304 + Slc2a12 protein_coding processed_transcript MGP_BALBcJ_T0024858.1 MGP_BALBcJ_G0017068.1 mouse_genomes_project 10 31283423 31298517 + MGP_BALBcJ_P0024858 Sult3a1 protein_coding protein_coding MGP_BALBcJ_T0024954.1 MGP_BALBcJ_G0017106.1 mouse_genomes_project 10 38431394 38483105 - MGP_BALBcJ_P0024954 Cdc40 protein_coding protein_coding MGP_BALBcJ_T0012421.1 MGP_BALBcJ_G0010518.1 mouse_genomes_project 10 120888538 120889529 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027045.1 MGP_BALBcJ_G0017671.1 mouse_genomes_project 10 112959777 113364187 - MGP_BALBcJ_P0027045 Trhde protein_coding protein_coding MGP_BALBcJ_T0027046.1 MGP_BALBcJ_G0017671.1 mouse_genomes_project 10 113124930 113365071 - Trhde protein_coding retained_intron MGP_BALBcJ_T0027047.1 MGP_BALBcJ_G0017671.1 mouse_genomes_project 10 113349648 113364134 - Trhde protein_coding retained_intron MGP_BALBcJ_T0024603.1 MGP_BALBcJ_G0016970.1 mouse_genomes_project 10 15144200 15155939 - MGP_BALBcJ_P0024603 Abracl protein_coding protein_coding MGP_BALBcJ_T0025287.1 MGP_BALBcJ_G0017209.1 mouse_genomes_project 10 58278606 58323159 - MGP_BALBcJ_P0025287 Slc29a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025288.1 MGP_BALBcJ_G0017209.1 mouse_genomes_project 10 58279213 58324145 - MGP_BALBcJ_P0025288 Slc29a3 protein_coding protein_coding MGP_BALBcJ_T0025289.1 MGP_BALBcJ_G0017209.1 mouse_genomes_project 10 58279407 58292667 - Slc29a3 protein_coding retained_intron MGP_BALBcJ_T0025290.1 MGP_BALBcJ_G0017209.1 mouse_genomes_project 10 58289211 58323170 - Slc29a3 protein_coding processed_transcript MGP_BALBcJ_T0025259.1 MGP_BALBcJ_G0017205.1 mouse_genomes_project 10 57841700 57867375 + MGP_BALBcJ_P0025259 Psap protein_coding protein_coding MGP_BALBcJ_T0025260.1 MGP_BALBcJ_G0017205.1 mouse_genomes_project 10 57841701 57867378 + MGP_BALBcJ_P0025260 Psap protein_coding protein_coding MGP_BALBcJ_T0025261.1 MGP_BALBcJ_G0017205.1 mouse_genomes_project 10 57841701 57867378 + MGP_BALBcJ_P0025261 Psap protein_coding protein_coding MGP_BALBcJ_T0025262.1 MGP_BALBcJ_G0017205.1 mouse_genomes_project 10 57841701 57867378 + MGP_BALBcJ_P0025262 Psap protein_coding protein_coding MGP_BALBcJ_T0025263.1 MGP_BALBcJ_G0017205.1 mouse_genomes_project 10 57849003 57867378 + MGP_BALBcJ_P0025263 Psap protein_coding protein_coding MGP_BALBcJ_T0099209.1 MGP_BALBcJ_G0037245.1 mouse_genomes_project 10 89369885 89369988 + Gm25390 snRNA snRNA MGP_BALBcJ_T0099173.1 MGP_BALBcJ_G0037209.1 mouse_genomes_project 10 22313319 22313426 + Gm23410 snRNA snRNA MGP_BALBcJ_T0026913.1 MGP_BALBcJ_G0017622.1 mouse_genomes_project 10 96147158 96147473 - MGP_BALBcJ_P0026913 Gm10754 protein_coding protein_coding MGP_BALBcJ_T0006082.1 MGP_BALBcJ_G0005092.1 mouse_genomes_project 10 64621292 64623990 + Gm26576 lincRNA lincRNA MGP_BALBcJ_T0006086.1 MGP_BALBcJ_G0005096.1 mouse_genomes_project 10 75760309 75763007 + 1700009J07Rik lincRNA lincRNA MGP_BALBcJ_T0006087.1 MGP_BALBcJ_G0005096.1 mouse_genomes_project 10 75760312 75763004 + 1700009J07Rik lincRNA lincRNA MGP_BALBcJ_T0006088.1 MGP_BALBcJ_G0005096.1 mouse_genomes_project 10 75760320 75761404 + 1700009J07Rik lincRNA lincRNA MGP_BALBcJ_T0098814.1 MGP_BALBcJ_G0036867.1 mouse_genomes_project 10 92797090 92798932 + Gm16155 sense_intronic sense_intronic MGP_BALBcJ_T0011773.1 MGP_BALBcJ_G0009896.1 mouse_genomes_project 10 128613505 128614450 + MGP_BALBcJ_P0011773 Olfr779 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011774.1 MGP_BALBcJ_G0009896.1 mouse_genomes_project 10 128613850 128614240 + MGP_BALBcJ_P0011774 Olfr779 polymorphic_pseudogene protein_coding MGP_BALBcJ_T0017079.1 MGP_BALBcJ_G0015073.1 mouse_genomes_project 10 59189033 59214572 - Gm28447 processed_transcript antisense MGP_BALBcJ_T0017080.1 MGP_BALBcJ_G0015073.1 mouse_genomes_project 10 59194876 59195853 - Gm28447 processed_transcript retained_intron MGP_BALBcJ_T0026550.1 MGP_BALBcJ_G0017527.1 mouse_genomes_project 10 81445812 81553057 - MGP_BALBcJ_P0026550 Slc41a2 protein_coding protein_coding MGP_BALBcJ_T0026551.1 MGP_BALBcJ_G0017527.1 mouse_genomes_project 10 81515856 81519216 - Slc41a2 protein_coding processed_transcript MGP_BALBcJ_T0026552.1 MGP_BALBcJ_G0017527.1 mouse_genomes_project 10 81530906 81537469 - MGP_BALBcJ_P0026552 Slc41a2 protein_coding protein_coding MGP_BALBcJ_T0026553.1 MGP_BALBcJ_G0017527.1 mouse_genomes_project 10 81531033 81552615 - MGP_BALBcJ_P0026553 Slc41a2 protein_coding protein_coding MGP_BALBcJ_T0026554.1 MGP_BALBcJ_G0017527.1 mouse_genomes_project 10 81531263 81550544 - MGP_BALBcJ_P0026554 Slc41a2 protein_coding protein_coding MGP_BALBcJ_T0024998.1 MGP_BALBcJ_G0017117.1 mouse_genomes_project 10 39217153 39242607 - MGP_BALBcJ_P0024998 protein_coding protein_coding MGP_BALBcJ_T0026644.1 MGP_BALBcJ_G0017557.1 mouse_genomes_project 10 85123272 85176330 + MGP_BALBcJ_P0026644 Nt5dc3 protein_coding protein_coding MGP_BALBcJ_T0027132.1 MGP_BALBcJ_G0017702.1 mouse_genomes_project 10 116372732 116417009 - MGP_BALBcJ_P0027132 Nup107 protein_coding protein_coding MGP_BALBcJ_T0027133.1 MGP_BALBcJ_G0017702.1 mouse_genomes_project 10 116372751 116417016 - MGP_BALBcJ_P0027133 Nup107 protein_coding protein_coding MGP_BALBcJ_T0024392.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664156 3941345 + MGP_BALBcJ_P0024392 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024393.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664156 3880806 + MGP_BALBcJ_P0024393 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024394.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3941690 + MGP_BALBcJ_P0024394 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024395.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3753974 + MGP_BALBcJ_P0024395 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024396.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3753221 + MGP_BALBcJ_P0024396 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024397.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3753221 + MGP_BALBcJ_P0024397 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024398.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3753221 + MGP_BALBcJ_P0024398 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024399.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3753221 + MGP_BALBcJ_P0024399 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024400.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3664243 3731956 + MGP_BALBcJ_P0024400 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024401.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692061 3753711 + MGP_BALBcJ_P0024401 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024402.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692154 3941321 + MGP_BALBcJ_P0024402 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024403.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3941626 + MGP_BALBcJ_P0024403 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024404.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3733630 + MGP_BALBcJ_P0024404 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024405.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3744117 + MGP_BALBcJ_P0024405 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024406.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3941342 + MGP_BALBcJ_P0024406 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024407.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3744292 + MGP_BALBcJ_P0024407 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024408.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3880866 + MGP_BALBcJ_P0024408 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024409.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3880856 + MGP_BALBcJ_P0024409 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024410.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3741431 + MGP_BALBcJ_P0024410 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024411.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3735770 + MGP_BALBcJ_P0024411 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024412.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3941606 + MGP_BALBcJ_P0024412 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024413.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3941321 + MGP_BALBcJ_P0024413 Oprm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024414.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3744135 + MGP_BALBcJ_P0024414 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024415.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3742670 + MGP_BALBcJ_P0024415 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024416.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3941345 + MGP_BALBcJ_P0024416 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024417.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692269 3942334 + MGP_BALBcJ_P0024417 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024418.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692297 3742705 + MGP_BALBcJ_P0024418 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024419.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692297 3735576 + MGP_BALBcJ_P0024419 Oprm1 protein_coding protein_coding MGP_BALBcJ_T0024420.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692435 3941626 + Oprm1 protein_coding processed_transcript MGP_BALBcJ_T0024421.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692485 3731903 + Oprm1 protein_coding processed_transcript MGP_BALBcJ_T0024422.1 MGP_BALBcJ_G0016926.1 mouse_genomes_project 10 3692559 3753350 + Oprm1 protein_coding processed_transcript MGP_BALBcJ_T0025754.1 MGP_BALBcJ_G0017313.1 mouse_genomes_project 10 73845489 73901438 - MGP_BALBcJ_P0025754 Slc5a4b protein_coding protein_coding MGP_BALBcJ_T0024962.1 MGP_BALBcJ_G0017111.1 mouse_genomes_project 10 39042997 39058230 + MGP_BALBcJ_P0024962 Zbtb24 protein_coding protein_coding MGP_BALBcJ_T0012424.1 MGP_BALBcJ_G0010521.1 mouse_genomes_project 10 129066293 129067264 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025118.1 MGP_BALBcJ_G0017156.1 mouse_genomes_project 10 49491579 49492601 - MGP_BALBcJ_P0025118 4933411G06Rik protein_coding protein_coding MGP_BALBcJ_T0099224.1 MGP_BALBcJ_G0037260.1 mouse_genomes_project 10 126174759 126174868 - Gm23819 snRNA snRNA MGP_BALBcJ_T0012413.1 MGP_BALBcJ_G0010510.1 mouse_genomes_project 10 100953862 100954807 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025167.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55456314 55564271 + MGP_BALBcJ_P0025167 Pkib protein_coding protein_coding MGP_BALBcJ_T0025168.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55456384 55566423 + MGP_BALBcJ_P0025168 Pkib protein_coding protein_coding MGP_BALBcJ_T0025169.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55456389 55532504 + Pkib protein_coding retained_intron MGP_BALBcJ_T0025170.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55456427 55480819 + Pkib protein_coding retained_intron MGP_BALBcJ_T0025171.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55456457 55553507 + MGP_BALBcJ_P0025171 Pkib protein_coding protein_coding MGP_BALBcJ_T0025172.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55465293 55539064 + Pkib protein_coding processed_transcript MGP_BALBcJ_T0025173.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55471226 55561727 + MGP_BALBcJ_P0025173 Pkib protein_coding protein_coding MGP_BALBcJ_T0025174.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55471277 55561727 + MGP_BALBcJ_P0025174 Pkib protein_coding protein_coding MGP_BALBcJ_T0025175.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55476798 55562426 + MGP_BALBcJ_P0025175 Pkib protein_coding protein_coding MGP_BALBcJ_T0025176.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55476811 55561728 + MGP_BALBcJ_P0025176 Pkib protein_coding protein_coding MGP_BALBcJ_T0025177.1 MGP_BALBcJ_G0017178.1 mouse_genomes_project 10 55553337 55561798 + Pkib protein_coding processed_transcript MGP_BALBcJ_T0024733.1 MGP_BALBcJ_G0017015.1 mouse_genomes_project 10 21259264 21269794 + MGP_BALBcJ_P0024733 Vnn1 protein_coding protein_coding MGP_BALBcJ_T0025180.1 MGP_BALBcJ_G0017180.1 mouse_genomes_project 10 55614986 55623239 + MGP_BALBcJ_P0025180 Smpdl3a protein_coding protein_coding MGP_BALBcJ_T0025181.1 MGP_BALBcJ_G0017180.1 mouse_genomes_project 10 55615025 55633471 + MGP_BALBcJ_P0025181 Smpdl3a protein_coding protein_coding MGP_BALBcJ_T0025182.1 MGP_BALBcJ_G0017180.1 mouse_genomes_project 10 55615219 55628145 + Smpdl3a protein_coding processed_transcript MGP_BALBcJ_T0027270.1 MGP_BALBcJ_G0017746.1 mouse_genomes_project 10 125848709 125875805 - MGP_BALBcJ_P0027270 Os9 protein_coding protein_coding MGP_BALBcJ_T0027271.1 MGP_BALBcJ_G0017746.1 mouse_genomes_project 10 125848709 125875805 - MGP_BALBcJ_P0027271 Os9 protein_coding protein_coding MGP_BALBcJ_T0025603.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69087835 69126254 + MGP_BALBcJ_P0025603 Ipmk protein_coding protein_coding MGP_BALBcJ_T0025604.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69087908 69122608 + MGP_BALBcJ_P0025604 Ipmk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025605.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69087908 69117789 + MGP_BALBcJ_P0025605 Ipmk protein_coding protein_coding MGP_BALBcJ_T0025606.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69087908 69122369 + MGP_BALBcJ_P0025606 Ipmk protein_coding protein_coding MGP_BALBcJ_T0025607.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69087915 69103850 + Ipmk protein_coding retained_intron MGP_BALBcJ_T0025608.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69122117 69174202 + MGP_BALBcJ_P0025608 Ipmk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025609.1 MGP_BALBcJ_G0017282.1 mouse_genomes_project 10 69150904 69174349 + Ipmk protein_coding processed_transcript MGP_BALBcJ_T0009617.1 MGP_BALBcJ_G0007742.1 mouse_genomes_project 10 127192212 127192281 + Mir6914 miRNA miRNA MGP_BALBcJ_T0025034.1 MGP_BALBcJ_G0017126.1 mouse_genomes_project 10 40204081 40204991 + Ostm1 protein_coding processed_transcript MGP_BALBcJ_T0025035.1 MGP_BALBcJ_G0017126.1 mouse_genomes_project 10 40204094 40320589 + MGP_BALBcJ_P0025035 Ostm1 protein_coding protein_coding MGP_BALBcJ_T0025036.1 MGP_BALBcJ_G0017126.1 mouse_genomes_project 10 40204097 40322758 + MGP_BALBcJ_P0025036 Ostm1 protein_coding protein_coding MGP_BALBcJ_T0025037.1 MGP_BALBcJ_G0017126.1 mouse_genomes_project 10 40301253 40324725 + MGP_BALBcJ_P0025037 Ostm1 protein_coding protein_coding MGP_BALBcJ_T0025038.1 MGP_BALBcJ_G0017126.1 mouse_genomes_project 10 40301303 40322257 + Ostm1 protein_coding retained_intron MGP_BALBcJ_T0026511.1 MGP_BALBcJ_G0017511.1 mouse_genomes_project 10 79970010 79976760 - MGP_BALBcJ_P0026511 protein_coding protein_coding MGP_BALBcJ_T0027584.1 MGP_BALBcJ_G0017883.1 mouse_genomes_project 10 129053423 129073218 - MGP_BALBcJ_P0027584 Olfr824 protein_coding protein_coding MGP_BALBcJ_T0003016.1 MGP_BALBcJ_G0002821.1 mouse_genomes_project 10 58508308 58517303 + Gm26947 antisense antisense MGP_BALBcJ_T0024570.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10668553 10897204 - MGP_BALBcJ_P0024570 Aig1 protein_coding protein_coding MGP_BALBcJ_T0024571.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10669168 10897046 - MGP_BALBcJ_P0024571 Aig1 protein_coding protein_coding MGP_BALBcJ_T0024572.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10673920 10897181 - MGP_BALBcJ_P0024572 Aig1 protein_coding protein_coding MGP_BALBcJ_T0024573.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10675057 10871743 - Aig1 protein_coding processed_transcript MGP_BALBcJ_T0024574.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10825477 10889627 - Aig1 protein_coding retained_intron MGP_BALBcJ_T0024575.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10853765 10897200 - Aig1 protein_coding retained_intron MGP_BALBcJ_T0024576.1 MGP_BALBcJ_G0016961.1 mouse_genomes_project 10 10856562 10897053 - Aig1 protein_coding processed_transcript MGP_BALBcJ_T0024440.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4581848 4613420 - MGP_BALBcJ_P0024440 Pcmt1 protein_coding protein_coding MGP_BALBcJ_T0024441.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4581848 4613076 - MGP_BALBcJ_P0024441 Pcmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024442.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4581856 4613115 - MGP_BALBcJ_P0024442 Pcmt1 protein_coding protein_coding MGP_BALBcJ_T0024443.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4587501 4613073 - MGP_BALBcJ_P0024443 Pcmt1 protein_coding protein_coding MGP_BALBcJ_T0024444.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4587501 4598786 - MGP_BALBcJ_P0024444 Pcmt1 protein_coding protein_coding MGP_BALBcJ_T0024445.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4589430 4613420 - Pcmt1 protein_coding retained_intron MGP_BALBcJ_T0024446.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4594258 4632164 - MGP_BALBcJ_P0024446 Pcmt1 protein_coding protein_coding MGP_BALBcJ_T0024447.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4597228 4601264 - MGP_BALBcJ_P0024447 Pcmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024448.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4597253 4632158 - MGP_BALBcJ_P0024448 Pcmt1 protein_coding protein_coding MGP_BALBcJ_T0024449.1 MGP_BALBcJ_G0016931.1 mouse_genomes_project 10 4598595 4613076 - Pcmt1 protein_coding retained_intron MGP_BALBcJ_T0025140.1 MGP_BALBcJ_G0017167.1 mouse_genomes_project 10 51309653 51401239 - MGP_BALBcJ_P0025140 Mcm9 protein_coding protein_coding MGP_BALBcJ_T0025141.1 MGP_BALBcJ_G0017167.1 mouse_genomes_project 10 51310648 51367454 - MGP_BALBcJ_P0025141 Mcm9 protein_coding unknown_likely_coding MGP_BALBcJ_T0009601.1 MGP_BALBcJ_G0007726.1 mouse_genomes_project 10 105956120 105956249 + Gm44403 miRNA miRNA MGP_BALBcJ_T0009582.1 MGP_BALBcJ_G0007707.1 mouse_genomes_project 10 79115400 79115460 + Mir5615-2 miRNA miRNA MGP_BALBcJ_T0025751.1 MGP_BALBcJ_G0017311.1 mouse_genomes_project 10 73735485 73790726 + MGP_BALBcJ_P0025751 Gm5134 protein_coding protein_coding MGP_BALBcJ_T0025752.1 MGP_BALBcJ_G0017311.1 mouse_genomes_project 10 73755318 73779489 + Gm5134 protein_coding retained_intron MGP_BALBcJ_T0024848.1 MGP_BALBcJ_G0017064.1 mouse_genomes_project 10 29122441 30306345 - MGP_BALBcJ_P0024848 Nkain2 protein_coding protein_coding MGP_BALBcJ_T0024849.1 MGP_BALBcJ_G0017064.1 mouse_genomes_project 10 29748317 29836631 - MGP_BALBcJ_P0024849 Nkain2 protein_coding protein_coding MGP_BALBcJ_T0024850.1 MGP_BALBcJ_G0017064.1 mouse_genomes_project 10 30305788 30306346 - MGP_BALBcJ_P0024850 Nkain2 protein_coding protein_coding MGP_BALBcJ_T0003053.1 MGP_BALBcJ_G0002850.1 mouse_genomes_project 10 84299382 84301271 - A230060F14Rik antisense antisense MGP_BALBcJ_T0003054.1 MGP_BALBcJ_G0002850.1 mouse_genomes_project 10 84300721 84301267 - A230060F14Rik antisense antisense MGP_BALBcJ_T0024898.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644847 36657208 - MGP_BALBcJ_P0024898 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024899.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644851 36657202 - MGP_BALBcJ_P0024899 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024900.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644853 36657150 - MGP_BALBcJ_P0024900 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024901.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644853 36649114 - MGP_BALBcJ_P0024901 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024902.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644861 36657202 - MGP_BALBcJ_P0024902 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024903.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644862 36657202 - MGP_BALBcJ_P0024903 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024904.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644863 36648326 - MGP_BALBcJ_P0024904 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024905.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644867 36657216 - MGP_BALBcJ_P0024905 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024906.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36644911 36657202 - MGP_BALBcJ_P0024906 Fam229b protein_coding protein_coding MGP_BALBcJ_T0024907.1 MGP_BALBcJ_G0017088.1 mouse_genomes_project 10 36645662 36657159 - Fam229b protein_coding retained_intron MGP_BALBcJ_T0024456.1 MGP_BALBcJ_G0016934.1 mouse_genomes_project 10 4677248 4713953 + MGP_BALBcJ_P0024456 Katna1 protein_coding protein_coding MGP_BALBcJ_T0024457.1 MGP_BALBcJ_G0016934.1 mouse_genomes_project 10 4677248 4713954 + MGP_BALBcJ_P0024457 Katna1 protein_coding protein_coding MGP_BALBcJ_T0024458.1 MGP_BALBcJ_G0016934.1 mouse_genomes_project 10 4677256 4703543 + MGP_BALBcJ_P0024458 Katna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024459.1 MGP_BALBcJ_G0016934.1 mouse_genomes_project 10 4699668 4711042 + Katna1 protein_coding retained_intron MGP_BALBcJ_T0024460.1 MGP_BALBcJ_G0016934.1 mouse_genomes_project 10 4710580 4713868 + MGP_BALBcJ_P0024460 Katna1 protein_coding protein_coding MGP_BALBcJ_T0024461.1 MGP_BALBcJ_G0016934.1 mouse_genomes_project 10 4712037 4713952 + MGP_BALBcJ_P0024461 Katna1 protein_coding protein_coding MGP_BALBcJ_T0027189.1 MGP_BALBcJ_G0017718.1 mouse_genomes_project 10 119717945 119787592 + MGP_BALBcJ_P0027189 Wif1 protein_coding protein_coding MGP_BALBcJ_T0027190.1 MGP_BALBcJ_G0017718.1 mouse_genomes_project 10 119718009 119787587 + MGP_BALBcJ_P0027190 Wif1 protein_coding protein_coding MGP_BALBcJ_T0027191.1 MGP_BALBcJ_G0017718.1 mouse_genomes_project 10 119770007 119787579 + Wif1 protein_coding retained_intron MGP_BALBcJ_T0025156.1 MGP_BALBcJ_G0017171.1 mouse_genomes_project 10 53800711 54010964 - MGP_BALBcJ_P0025156 Tbc1d32 protein_coding protein_coding MGP_BALBcJ_T0024694.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19010509 19129897 + MGP_BALBcJ_P0024694 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024695.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19010694 19027431 + Sgk1 protein_coding processed_transcript MGP_BALBcJ_T0024696.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19057568 19120243 + MGP_BALBcJ_P0024696 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024697.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19108429 19125897 + MGP_BALBcJ_P0024697 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024698.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19122061 19129902 + MGP_BALBcJ_P0024698 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024699.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19122061 19125878 + MGP_BALBcJ_P0024699 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024700.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19123898 19129895 + MGP_BALBcJ_P0024700 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024701.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19124691 19125605 + Sgk1 protein_coding retained_intron MGP_BALBcJ_T0024702.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19124696 19129906 + MGP_BALBcJ_P0024702 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024703.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19124719 19126345 + Sgk1 protein_coding retained_intron MGP_BALBcJ_T0024704.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19124918 19127440 + MGP_BALBcJ_P0024704 Sgk1 protein_coding protein_coding MGP_BALBcJ_T0024705.1 MGP_BALBcJ_G0016999.1 mouse_genomes_project 10 19126594 19128244 + Sgk1 protein_coding retained_intron MGP_BALBcJ_T0024381.1 MGP_BALBcJ_G0016921.1 mouse_genomes_project 10 2540764 2549156 + MGP_BALBcJ_P0024381 Vip protein_coding protein_coding MGP_BALBcJ_T0025776.1 MGP_BALBcJ_G0017321.1 mouse_genomes_project 10 74267052 74317987 + MGP_BALBcJ_P0025776 Mcm3ap protein_coding protein_coding MGP_BALBcJ_T0027285.1 MGP_BALBcJ_G0017752.1 mouse_genomes_project 10 125981677 126020154 - MGP_BALBcJ_P0027285 Kif5a protein_coding protein_coding MGP_BALBcJ_T0009577.1 MGP_BALBcJ_G0007702.1 mouse_genomes_project 10 78273659 78273728 + Mir6911 miRNA miRNA MGP_BALBcJ_T0024957.1 MGP_BALBcJ_G0017108.1 mouse_genomes_project 10 38672789 38675086 - MGP_BALBcJ_P0024957 Gpr6 protein_coding protein_coding MGP_BALBcJ_T0024569.1 MGP_BALBcJ_G0016960.1 mouse_genomes_project 10 10580500 10590981 + MGP_BALBcJ_P0024569 Adat2 protein_coding protein_coding MGP_BALBcJ_T0026186.1 MGP_BALBcJ_G0017433.1 mouse_genomes_project 10 78288459 78290095 + MGP_BALBcJ_P0026186 Rps15 protein_coding protein_coding MGP_BALBcJ_T0027023.1 MGP_BALBcJ_G0017660.1 mouse_genomes_project 10 109683608 109778469 + MGP_BALBcJ_P0027023 Osbpl8 protein_coding protein_coding MGP_BALBcJ_T0102127.1 MGP_BALBcJ_G0039944.1 mouse_genomes_project 10 128927741 128927930 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011250.1 MGP_BALBcJ_G0009375.1 mouse_genomes_project 10 60570402 60570685 + Gm22803 misc_RNA misc_RNA MGP_BALBcJ_T0024525.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10054740 10126061 + MGP_BALBcJ_P0024525 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0024526.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089006 10123567 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024527.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089027 10123722 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024528.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089103 10123606 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024529.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089103 10130227 + MGP_BALBcJ_P0024529 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0024530.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10112925 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024531.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10115440 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024532.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10115499 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024533.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10115422 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024534.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10115482 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024535.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10123687 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024536.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10107205 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024537.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10115438 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024538.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10104678 + Plagl1 protein_coding retained_intron MGP_BALBcJ_T0024539.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10123624 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024540.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10123606 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024541.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10111270 + Plagl1 protein_coding processed_transcript MGP_BALBcJ_T0024542.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089147 10129688 + MGP_BALBcJ_P0024542 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0024543.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089150 10129675 + MGP_BALBcJ_P0024543 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0024544.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089156 10112166 + Plagl1 protein_coding retained_intron MGP_BALBcJ_T0024545.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089189 10111506 + Plagl1 protein_coding retained_intron MGP_BALBcJ_T0024546.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089189 10111606 + Plagl1 protein_coding retained_intron MGP_BALBcJ_T0024547.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10089328 10123737 + MGP_BALBcJ_P0024547 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0024548.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10112186 10126048 + MGP_BALBcJ_P0024548 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0024549.1 MGP_BALBcJ_G0016954.1 mouse_genomes_project 10 10115081 10123774 + MGP_BALBcJ_P0024549 Plagl1 protein_coding protein_coding MGP_BALBcJ_T0026635.1 MGP_BALBcJ_G0017553.1 mouse_genomes_project 10 84819674 84821126 - MGP_BALBcJ_P0026635 Gm6729 protein_coding protein_coding MGP_BALBcJ_T0026063.1 MGP_BALBcJ_G0017407.1 mouse_genomes_project 10 77872734 77874538 + MGP_BALBcJ_P0026063 Cfd protein_coding protein_coding MGP_BALBcJ_T0025069.1 MGP_BALBcJ_G0017135.1 mouse_genomes_project 10 41237961 41275799 + MGP_BALBcJ_P0025069 F930017D23Rik protein_coding protein_coding MGP_BALBcJ_T0026549.1 MGP_BALBcJ_G0017526.1 mouse_genomes_project 10 81195504 81411192 + MGP_BALBcJ_P0026549 Chst11 protein_coding protein_coding MGP_BALBcJ_T0027273.1 MGP_BALBcJ_G0017748.1 mouse_genomes_project 10 125928192 125936402 - MGP_BALBcJ_P0027273 Slc26a10 protein_coding protein_coding MGP_BALBcJ_T0027274.1 MGP_BALBcJ_G0017748.1 mouse_genomes_project 10 125928304 125936049 - MGP_BALBcJ_P0027274 Slc26a10 protein_coding unknown_likely_coding MGP_BALBcJ_T0100438.1 MGP_BALBcJ_G0038474.1 mouse_genomes_project 10 42965558 42965687 - Gm26016 snoRNA snoRNA MGP_BALBcJ_T0025748.1 MGP_BALBcJ_G0017309.1 mouse_genomes_project 10 73716786 73718939 + MGP_BALBcJ_P0025748 Chchd10 protein_coding protein_coding MGP_BALBcJ_T0026476.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79622935 79629621 - Tle6 protein_coding processed_transcript MGP_BALBcJ_T0026477.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79622935 79632969 - MGP_BALBcJ_P0026477 Tle6 protein_coding protein_coding MGP_BALBcJ_T0026478.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79622936 79627447 - Tle6 protein_coding retained_intron MGP_BALBcJ_T0026479.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79622936 79624747 - Tle6 protein_coding processed_transcript MGP_BALBcJ_T0026480.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79622936 79632994 - MGP_BALBcJ_P0026480 Tle6 protein_coding protein_coding MGP_BALBcJ_T0026481.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79622938 79629376 - Tle6 protein_coding processed_transcript MGP_BALBcJ_T0026482.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79623164 79624850 - Tle6 protein_coding retained_intron MGP_BALBcJ_T0026483.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79625950 79627276 - Tle6 protein_coding retained_intron MGP_BALBcJ_T0026484.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79626270 79627840 - Tle6 protein_coding retained_intron MGP_BALBcJ_T0026485.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79627240 79629369 - Tle6 protein_coding processed_transcript MGP_BALBcJ_T0026486.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79627260 79629362 - Tle6 protein_coding processed_transcript MGP_BALBcJ_T0026487.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79627984 79629398 - Tle6 protein_coding processed_transcript MGP_BALBcJ_T0026488.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79628024 79632951 - MGP_BALBcJ_P0026488 Tle6 protein_coding protein_coding MGP_BALBcJ_T0026489.1 MGP_BALBcJ_G0017507.1 mouse_genomes_project 10 79628027 79633167 - MGP_BALBcJ_P0026489 Tle6 protein_coding protein_coding MGP_BALBcJ_T0026989.1 MGP_BALBcJ_G0017648.1 mouse_genomes_project 10 105749361 105900493 + MGP_BALBcJ_P0026989 Lin7a protein_coding protein_coding MGP_BALBcJ_T0026990.1 MGP_BALBcJ_G0017648.1 mouse_genomes_project 10 105749361 105900493 + MGP_BALBcJ_P0026990 Lin7a protein_coding protein_coding MGP_BALBcJ_T0025142.1 MGP_BALBcJ_G0017168.1 mouse_genomes_project 10 51367525 51379778 + MGP_BALBcJ_P0025142 Asf1a protein_coding protein_coding MGP_BALBcJ_T0009548.1 MGP_BALBcJ_G0007673.1 mouse_genomes_project 10 22330070 22330140 + Mir6905 miRNA miRNA MGP_BALBcJ_T0025714.1 MGP_BALBcJ_G0017296.1 mouse_genomes_project 10 73361751 73389789 + MGP_BALBcJ_P0025714 Ggt5 protein_coding protein_coding MGP_BALBcJ_T0025715.1 MGP_BALBcJ_G0017296.1 mouse_genomes_project 10 73361792 73377672 + MGP_BALBcJ_P0025715 Ggt5 protein_coding protein_coding MGP_BALBcJ_T0025716.1 MGP_BALBcJ_G0017296.1 mouse_genomes_project 10 73362203 73377674 + MGP_BALBcJ_P0025716 Ggt5 protein_coding protein_coding MGP_BALBcJ_T0025717.1 MGP_BALBcJ_G0017296.1 mouse_genomes_project 10 73376351 73381776 + Ggt5 protein_coding processed_transcript MGP_BALBcJ_T0025158.1 MGP_BALBcJ_G0017173.1 mouse_genomes_project 10 54151669 54164924 + MGP_BALBcJ_P0025158 Gja1 protein_coding protein_coding MGP_BALBcJ_T0100452.1 MGP_BALBcJ_G0038488.1 mouse_genomes_project 10 75780991 75781045 - Gm22871 snoRNA snoRNA MGP_BALBcJ_T0026413.1 MGP_BALBcJ_G0017496.1 mouse_genomes_project 10 79389874 79402169 - MGP_BALBcJ_P0026413 Fzr1 protein_coding protein_coding MGP_BALBcJ_T0026414.1 MGP_BALBcJ_G0017496.1 mouse_genomes_project 10 79390750 79402104 - MGP_BALBcJ_P0026414 Fzr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026415.1 MGP_BALBcJ_G0017496.1 mouse_genomes_project 10 79391024 79402116 - Fzr1 protein_coding retained_intron MGP_BALBcJ_T0026416.1 MGP_BALBcJ_G0017496.1 mouse_genomes_project 10 79391161 79395066 - MGP_BALBcJ_P0026416 Fzr1 protein_coding protein_coding MGP_BALBcJ_T0026417.1 MGP_BALBcJ_G0017496.1 mouse_genomes_project 10 79391928 79393194 - Fzr1 protein_coding retained_intron MGP_BALBcJ_T0026418.1 MGP_BALBcJ_G0017496.1 mouse_genomes_project 10 79399015 79402033 - Fzr1 protein_coding processed_transcript MGP_BALBcJ_T0025360.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59884275 59957942 - MGP_BALBcJ_P0025360 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025361.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59884524 59995409 - MGP_BALBcJ_P0025361 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025362.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59884528 59975724 - MGP_BALBcJ_P0025362 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025363.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59885329 59960122 - MGP_BALBcJ_P0025363 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025364.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59900251 59905694 - Hk1 protein_coding retained_intron MGP_BALBcJ_T0025365.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59911221 59935458 - MGP_BALBcJ_P0025365 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025366.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59911454 59944987 - MGP_BALBcJ_P0025366 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025367.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59912594 59960099 - MGP_BALBcJ_P0025367 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025368.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59912839 59960108 - Hk1 protein_coding retained_intron MGP_BALBcJ_T0025369.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59995353 - MGP_BALBcJ_P0025369 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025370.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025370 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025371.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59995353 - MGP_BALBcJ_P0025371 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025372.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025372 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025373.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025373 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025374.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025374 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025375.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025375 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025376.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025376 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025377.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59995353 - MGP_BALBcJ_P0025377 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025378.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932540 59990602 - MGP_BALBcJ_P0025378 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025379.1 MGP_BALBcJ_G0017233.1 mouse_genomes_project 10 59932585 59979636 - MGP_BALBcJ_P0025379 Hk1 protein_coding protein_coding MGP_BALBcJ_T0025068.1 MGP_BALBcJ_G0017134.1 mouse_genomes_project 10 41222972 41228060 + MGP_BALBcJ_P0025068 Cd24a protein_coding protein_coding MGP_BALBcJ_T0025256.1 MGP_BALBcJ_G0017204.1 mouse_genomes_project 10 57740564 57779099 - MGP_BALBcJ_P0025256 Chst3 protein_coding protein_coding MGP_BALBcJ_T0025257.1 MGP_BALBcJ_G0017204.1 mouse_genomes_project 10 57740566 57747740 - MGP_BALBcJ_P0025257 Chst3 protein_coding protein_coding MGP_BALBcJ_T0025258.1 MGP_BALBcJ_G0017204.1 mouse_genomes_project 10 57744637 57753273 - MGP_BALBcJ_P0025258 Chst3 protein_coding protein_coding MGP_BALBcJ_T0025160.1 MGP_BALBcJ_G0017175.1 mouse_genomes_project 10 55252574 55258744 + MGP_BALBcJ_P0025160 protein_coding protein_coding MGP_BALBcJ_T0026377.1 MGP_BALBcJ_G0017486.1 mouse_genomes_project 10 79287036 79289253 - MGP_BALBcJ_P0026377 Mrpl54 protein_coding protein_coding MGP_BALBcJ_T0026378.1 MGP_BALBcJ_G0017486.1 mouse_genomes_project 10 79287753 79289243 - Mrpl54 protein_coding retained_intron MGP_BALBcJ_T0099199.1 MGP_BALBcJ_G0037235.1 mouse_genomes_project 10 77891182 77891289 + Gm24019 snRNA snRNA MGP_BALBcJ_T0027067.1 MGP_BALBcJ_G0017680.1 mouse_genomes_project 10 114397069 114433411 + MGP_BALBcJ_P0027067 Tspan8 protein_coding protein_coding MGP_BALBcJ_T0027068.1 MGP_BALBcJ_G0017680.1 mouse_genomes_project 10 114397069 114433411 + MGP_BALBcJ_P0027068 Tspan8 protein_coding protein_coding MGP_BALBcJ_T0027069.1 MGP_BALBcJ_G0017680.1 mouse_genomes_project 10 114397069 114433411 + MGP_BALBcJ_P0027069 Tspan8 protein_coding protein_coding MGP_BALBcJ_T0027579.1 MGP_BALBcJ_G0017879.1 mouse_genomes_project 10 128903543 128915160 - MGP_BALBcJ_P0027579 protein_coding protein_coding MGP_BALBcJ_T0027377.1 MGP_BALBcJ_G0017783.1 mouse_genomes_project 10 126803232 126817630 + MGP_BALBcJ_P0027377 Prim1 protein_coding protein_coding MGP_BALBcJ_T0027378.1 MGP_BALBcJ_G0017783.1 mouse_genomes_project 10 126803236 126817684 + MGP_BALBcJ_P0027378 Prim1 protein_coding protein_coding MGP_BALBcJ_T0027379.1 MGP_BALBcJ_G0017783.1 mouse_genomes_project 10 126803260 126817512 + Prim1 protein_coding retained_intron MGP_BALBcJ_T0027380.1 MGP_BALBcJ_G0017783.1 mouse_genomes_project 10 126807805 126810011 + Prim1 protein_coding retained_intron MGP_BALBcJ_T0027381.1 MGP_BALBcJ_G0017783.1 mouse_genomes_project 10 126814333 126817680 + Prim1 protein_coding retained_intron MGP_BALBcJ_T0025921.1 MGP_BALBcJ_G0017356.1 mouse_genomes_project 10 75938871 75949049 + MGP_BALBcJ_P0025921 Icosl protein_coding protein_coding MGP_BALBcJ_T0027098.1 MGP_BALBcJ_G0017688.1 mouse_genomes_project 10 115550389 115566270 - MGP_BALBcJ_P0027098 Gm10271 protein_coding protein_coding MGP_BALBcJ_T0011264.1 MGP_BALBcJ_G0009389.1 mouse_genomes_project 10 107573686 107573964 - Gm22097 misc_RNA misc_RNA MGP_BALBcJ_T0000824.1 MGP_BALBcJ_G0000756.1 mouse_genomes_project 10 110309692 110309990 + TEC TEC MGP_BALBcJ_T0027218.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121386343 121589927 + Ppm1h protein_coding retained_intron MGP_BALBcJ_T0027219.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121386359 121635465 + MGP_BALBcJ_P0027219 Ppm1h protein_coding protein_coding MGP_BALBcJ_T0027220.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121386363 121657815 + MGP_BALBcJ_P0027220 Ppm1h protein_coding protein_coding MGP_BALBcJ_T0027221.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121464081 121519574 + Ppm1h protein_coding processed_transcript MGP_BALBcJ_T0027222.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121519346 121527713 + Ppm1h protein_coding retained_intron MGP_BALBcJ_T0027223.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121519504 121653315 + Ppm1h protein_coding retained_intron MGP_BALBcJ_T0027224.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121519549 121595776 + Ppm1h protein_coding processed_transcript MGP_BALBcJ_T0027225.1 MGP_BALBcJ_G0017729.1 mouse_genomes_project 10 121605498 121653476 + MGP_BALBcJ_P0027225 Ppm1h protein_coding protein_coding MGP_BALBcJ_T0026992.1 MGP_BALBcJ_G0017650.1 mouse_genomes_project 10 105969115 105971315 - MGP_BALBcJ_P0026992 Myf6 protein_coding protein_coding MGP_BALBcJ_T0025303.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58758986 58776591 + MGP_BALBcJ_P0025303 Tbata protein_coding protein_coding MGP_BALBcJ_T0025304.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58758996 58767462 + MGP_BALBcJ_P0025304 Tbata protein_coding protein_coding MGP_BALBcJ_T0025305.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58759018 58776596 + MGP_BALBcJ_P0025305 Tbata protein_coding protein_coding MGP_BALBcJ_T0025306.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58761402 58770454 + MGP_BALBcJ_P0025306 Tbata protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025307.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58762294 58767459 + Tbata protein_coding processed_transcript MGP_BALBcJ_T0025308.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58762294 58767459 + Tbata protein_coding processed_transcript MGP_BALBcJ_T0025309.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58762294 58767459 + Tbata protein_coding processed_transcript MGP_BALBcJ_T0025310.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58762294 58767458 + MGP_BALBcJ_P0025310 Tbata protein_coding protein_coding MGP_BALBcJ_T0025311.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58762408 58767459 + Tbata protein_coding processed_transcript MGP_BALBcJ_T0025312.1 MGP_BALBcJ_G0017213.1 mouse_genomes_project 10 58762957 58776594 + MGP_BALBcJ_P0025312 Tbata protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024711.1 MGP_BALBcJ_G0017005.1 mouse_genomes_project 10 19171169 19176264 - MGP_BALBcJ_P0024711 protein_coding protein_coding MGP_BALBcJ_T0027233.1 MGP_BALBcJ_G0017734.1 mouse_genomes_project 10 124720730 124773786 + MGP_BALBcJ_P0027233 Lrig3 protein_coding protein_coding MGP_BALBcJ_T0025965.1 MGP_BALBcJ_G0017380.1 mouse_genomes_project 10 77018661 77357379 + MGP_BALBcJ_P0025965 protein_coding protein_coding MGP_BALBcJ_T0026273.1 MGP_BALBcJ_G0017456.1 mouse_genomes_project 10 78712145 78747040 - MGP_BALBcJ_P0026273 Ap3d1 protein_coding protein_coding MGP_BALBcJ_T0100454.1 MGP_BALBcJ_G0038490.1 mouse_genomes_project 10 89485181 89485427 - Gm24119 snoRNA snoRNA MGP_BALBcJ_T0027366.1 MGP_BALBcJ_G0017776.1 mouse_genomes_project 10 126550632 126566365 + MGP_BALBcJ_P0027366 protein_coding protein_coding MGP_BALBcJ_T0025968.1 MGP_BALBcJ_G0017383.1 mouse_genomes_project 10 77445180 77468019 + MGP_BALBcJ_P0025968 Vmn2r83 protein_coding protein_coding MGP_BALBcJ_T0025204.1 MGP_BALBcJ_G0017190.1 mouse_genomes_project 10 56336582 56566363 + MGP_BALBcJ_P0025204 Sh3rf3 protein_coding protein_coding MGP_BALBcJ_T0025205.1 MGP_BALBcJ_G0017190.1 mouse_genomes_project 10 56336681 56659056 + MGP_BALBcJ_P0025205 Sh3rf3 protein_coding protein_coding MGP_BALBcJ_T0025206.1 MGP_BALBcJ_G0017190.1 mouse_genomes_project 10 56337282 56527435 + Sh3rf3 protein_coding retained_intron MGP_BALBcJ_T0025207.1 MGP_BALBcJ_G0017190.1 mouse_genomes_project 10 56582321 56625293 + Sh3rf3 protein_coding retained_intron MGP_BALBcJ_T0025208.1 MGP_BALBcJ_G0017190.1 mouse_genomes_project 10 56596701 56624771 + Sh3rf3 protein_coding processed_transcript MGP_BALBcJ_T0025482.1 MGP_BALBcJ_G0017260.1 mouse_genomes_project 10 64984979 65003640 - MGP_BALBcJ_P0025482 Nrbf2 protein_coding protein_coding MGP_BALBcJ_T0025483.1 MGP_BALBcJ_G0017260.1 mouse_genomes_project 10 64986130 65003515 - MGP_BALBcJ_P0025483 Nrbf2 protein_coding protein_coding MGP_BALBcJ_T0025209.1 MGP_BALBcJ_G0017191.1 mouse_genomes_project 10 56684450 56742565 - MGP_BALBcJ_P0025209 Sept10 protein_coding protein_coding MGP_BALBcJ_T0100414.1 MGP_BALBcJ_G0038450.1 mouse_genomes_project 10 5748838 5748975 - Gm25410 snoRNA snoRNA MGP_BALBcJ_T0098444.1 MGP_BALBcJ_G0036498.1 mouse_genomes_project 10 28754043 28754156 - n-R5s76 rRNA rRNA MGP_BALBcJ_T0027565.1 MGP_BALBcJ_G0017869.1 mouse_genomes_project 10 128689840 128690720 + MGP_BALBcJ_P0027565 protein_coding protein_coding MGP_BALBcJ_T0026379.1 MGP_BALBcJ_G0017487.1 mouse_genomes_project 10 79290490 79295565 + MGP_BALBcJ_P0026379 Apba3 protein_coding protein_coding MGP_BALBcJ_T0003058.1 MGP_BALBcJ_G0002854.1 mouse_genomes_project 10 85250758 85252011 + Gm16280 antisense antisense MGP_BALBcJ_T0009615.1 MGP_BALBcJ_G0007740.1 mouse_genomes_project 10 126872624 126872702 + Mir677 miRNA miRNA MGP_BALBcJ_T0009563.1 MGP_BALBcJ_G0007688.1 mouse_genomes_project 10 58703189 58703284 - Gm44308 miRNA miRNA MGP_BALBcJ_T0026643.1 MGP_BALBcJ_G0017556.1 mouse_genomes_project 10 85075879 85076535 - MGP_BALBcJ_P0026643 Fabp3-ps1 protein_coding protein_coding MGP_BALBcJ_T0012398.1 MGP_BALBcJ_G0010495.1 mouse_genomes_project 10 69719913 69720718 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024845.1 MGP_BALBcJ_G0017062.1 mouse_genomes_project 10 28769241 28885469 - MGP_BALBcJ_P0024845 Tpd52l1 protein_coding unknown_likely_coding MGP_BALBcJ_T0024846.1 MGP_BALBcJ_G0017062.1 mouse_genomes_project 10 28769251 28885660 - MGP_BALBcJ_P0024846 Tpd52l1 protein_coding protein_coding MGP_BALBcJ_T0025755.1 MGP_BALBcJ_G0017314.1 mouse_genomes_project 10 73939113 73981247 + MGP_BALBcJ_P0025755 Slc5a4a protein_coding protein_coding MGP_BALBcJ_T0025938.1 MGP_BALBcJ_G0017363.1 mouse_genomes_project 10 76304733 76333728 - MGP_BALBcJ_P0025938 Pdxk protein_coding protein_coding MGP_BALBcJ_T0026878.1 MGP_BALBcJ_G0017606.1 mouse_genomes_project 10 92706252 92819463 + Tmcc3 protein_coding retained_intron MGP_BALBcJ_T0026879.1 MGP_BALBcJ_G0017606.1 mouse_genomes_project 10 92706320 92972479 + MGP_BALBcJ_P0026879 Tmcc3 protein_coding protein_coding MGP_BALBcJ_T0026880.1 MGP_BALBcJ_G0017606.1 mouse_genomes_project 10 92706433 92764402 + Tmcc3 protein_coding processed_transcript MGP_BALBcJ_T0026881.1 MGP_BALBcJ_G0017606.1 mouse_genomes_project 10 92908648 92980713 + MGP_BALBcJ_P0026881 Tmcc3 protein_coding protein_coding MGP_BALBcJ_T0026882.1 MGP_BALBcJ_G0017606.1 mouse_genomes_project 10 92939148 92972605 + MGP_BALBcJ_P0026882 Tmcc3 protein_coding protein_coding MGP_BALBcJ_T0026883.1 MGP_BALBcJ_G0017606.1 mouse_genomes_project 10 92944571 92972350 + MGP_BALBcJ_P0026883 Tmcc3 protein_coding protein_coding MGP_BALBcJ_T0027484.1 MGP_BALBcJ_G0017816.1 mouse_genomes_project 10 127492808 127512894 - MGP_BALBcJ_P0027484 Rab5b protein_coding protein_coding MGP_BALBcJ_T0003088.1 MGP_BALBcJ_G0002874.1 mouse_genomes_project 10 126437070 126438716 + Gm16229 antisense antisense MGP_BALBcJ_T0012379.1 MGP_BALBcJ_G0010476.1 mouse_genomes_project 10 37297361 37297971 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027334.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126311059 126393569 - MGP_BALBcJ_P0027334 Lrp1 protein_coding protein_coding MGP_BALBcJ_T0027335.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126311497 126312501 - Lrp1 protein_coding retained_intron MGP_BALBcJ_T0027336.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126312133 126313046 - Lrp1 protein_coding retained_intron MGP_BALBcJ_T0027337.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126315097 126316110 - Lrp1 protein_coding retained_intron MGP_BALBcJ_T0027338.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126319292 126322827 - MGP_BALBcJ_P0027338 Lrp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027339.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126350785 126354341 - Lrp1 protein_coding retained_intron MGP_BALBcJ_T0027340.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126354184 126355916 - MGP_BALBcJ_P0027340 Lrp1 protein_coding protein_coding MGP_BALBcJ_T0027341.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126360076 126393569 - Lrp1 protein_coding retained_intron MGP_BALBcJ_T0027342.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126361621 126393391 - MGP_BALBcJ_P0027342 Lrp1 protein_coding protein_coding MGP_BALBcJ_T0027343.1 MGP_BALBcJ_G0017766.1 mouse_genomes_project 10 126372311 126393343 - MGP_BALBcJ_P0027343 Lrp1 protein_coding protein_coding MGP_BALBcJ_T0012407.1 MGP_BALBcJ_G0010504.1 mouse_genomes_project 10 79532929 79533223 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012389.1 MGP_BALBcJ_G0010486.1 mouse_genomes_project 10 55426333 55426889 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026629.1 MGP_BALBcJ_G0017552.1 mouse_genomes_project 10 84573047 84622254 + MGP_BALBcJ_P0026629 Timp3 protein_coding protein_coding MGP_BALBcJ_T0026630.1 MGP_BALBcJ_G0017552.1 mouse_genomes_project 10 84573229 84579430 + Timp3 protein_coding processed_transcript MGP_BALBcJ_T0026631.1 MGP_BALBcJ_G0017552.1 mouse_genomes_project 10 84573231 84599594 + Timp3 protein_coding processed_transcript MGP_BALBcJ_T0026632.1 MGP_BALBcJ_G0017552.1 mouse_genomes_project 10 84575526 84616740 + MGP_BALBcJ_P0026632 Timp3 protein_coding protein_coding MGP_BALBcJ_T0024522.1 MGP_BALBcJ_G0016952.1 mouse_genomes_project 10 9941138 9965126 - MGP_BALBcJ_P0024522 Stx11 protein_coding protein_coding MGP_BALBcJ_T0024523.1 MGP_BALBcJ_G0016952.1 mouse_genomes_project 10 9941138 9965126 - MGP_BALBcJ_P0024523 Stx11 protein_coding protein_coding MGP_BALBcJ_T0024613.1 MGP_BALBcJ_G0016972.1 mouse_genomes_project 10 15263378 15344550 - MGP_BALBcJ_P0024613 Ect2l protein_coding protein_coding MGP_BALBcJ_T0024751.1 MGP_BALBcJ_G0017032.1 mouse_genomes_project 10 22011418 22014657 + MGP_BALBcJ_P0024751 Ctgf protein_coding protein_coding MGP_BALBcJ_T0024752.1 MGP_BALBcJ_G0017032.1 mouse_genomes_project 10 22011702 22014660 + MGP_BALBcJ_P0024752 Ctgf protein_coding protein_coding MGP_BALBcJ_T0024753.1 MGP_BALBcJ_G0017032.1 mouse_genomes_project 10 22011756 22012349 + MGP_BALBcJ_P0024753 Ctgf protein_coding protein_coding MGP_BALBcJ_T0025756.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 73998928 74031431 - MGP_BALBcJ_P0025756 Prmt2 protein_coding protein_coding MGP_BALBcJ_T0025757.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 73998933 74031403 - MGP_BALBcJ_P0025757 Prmt2 protein_coding protein_coding MGP_BALBcJ_T0025758.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 73998938 74031396 - MGP_BALBcJ_P0025758 Prmt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025759.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 73998938 74031402 - MGP_BALBcJ_P0025759 Prmt2 protein_coding protein_coding MGP_BALBcJ_T0025760.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 73999682 74031423 - MGP_BALBcJ_P0025760 Prmt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025761.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 74000124 74004353 - Prmt2 protein_coding retained_intron MGP_BALBcJ_T0025762.1 MGP_BALBcJ_G0017315.1 mouse_genomes_project 10 74000150 74005039 - Prmt2 protein_coding processed_transcript MGP_BALBcJ_T0100425.1 MGP_BALBcJ_G0038461.1 mouse_genomes_project 10 21165603 21165677 - Snord100 snoRNA snoRNA MGP_BALBcJ_T0024727.1 MGP_BALBcJ_G0017013.1 mouse_genomes_project 10 21178792 21208305 + MGP_BALBcJ_P0024727 Slc18b1 protein_coding protein_coding MGP_BALBcJ_T0024728.1 MGP_BALBcJ_G0017013.1 mouse_genomes_project 10 21178858 21187562 + MGP_BALBcJ_P0024728 Slc18b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024729.1 MGP_BALBcJ_G0017013.1 mouse_genomes_project 10 21179006 21187514 + MGP_BALBcJ_P0024729 Slc18b1 protein_coding protein_coding MGP_BALBcJ_T0024730.1 MGP_BALBcJ_G0017013.1 mouse_genomes_project 10 21187578 21199447 + MGP_BALBcJ_P0024730 Slc18b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024731.1 MGP_BALBcJ_G0017013.1 mouse_genomes_project 10 21204860 21207455 + Slc18b1 protein_coding retained_intron MGP_BALBcJ_T0024500.1 MGP_BALBcJ_G0016946.1 mouse_genomes_project 10 7645526 7646037 + MGP_BALBcJ_P0024500 Gm10944 protein_coding protein_coding MGP_BALBcJ_T0024630.1 MGP_BALBcJ_G0016978.1 mouse_genomes_project 10 15974355 15986613 + MGP_BALBcJ_P0024630 Perp protein_coding protein_coding MGP_BALBcJ_T0025200.1 MGP_BALBcJ_G0017186.1 mouse_genomes_project 10 56025003 56100859 + MGP_BALBcJ_P0025200 Ccdc138 protein_coding protein_coding MGP_BALBcJ_T0026298.1 MGP_BALBcJ_G0017464.1 mouse_genomes_project 10 78861035 78863421 - MGP_BALBcJ_P0026298 Gm10146 protein_coding protein_coding MGP_BALBcJ_T0101608.1 MGP_BALBcJ_G0039628.1 mouse_genomes_project 10 116212699 116214073 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101609.1 MGP_BALBcJ_G0039628.1 mouse_genomes_project 10 116213072 116213635 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0012403.1 MGP_BALBcJ_G0010500.1 mouse_genomes_project 10 73726264 73726657 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009550.1 MGP_BALBcJ_G0007675.1 mouse_genomes_project 10 23795424 23795550 - Gm27754 miRNA miRNA MGP_BALBcJ_T0026890.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93794556 93799854 - Gm9847 protein_coding retained_intron MGP_BALBcJ_T0026891.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93795244 93820260 - Gm9847 protein_coding processed_transcript MGP_BALBcJ_T0026892.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93808174 93820520 - Gm9847 protein_coding processed_transcript MGP_BALBcJ_T0026893.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93818287 93823767 - MGP_BALBcJ_P0026893 Gm9847 protein_coding protein_coding MGP_BALBcJ_T0026894.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93818287 93824412 - MGP_BALBcJ_P0026894 Gm9847 protein_coding protein_coding MGP_BALBcJ_T0026895.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93818287 93823039 - MGP_BALBcJ_P0026895 Gm9847 protein_coding protein_coding MGP_BALBcJ_T0026896.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93819994 93822838 - MGP_BALBcJ_P0026896 Gm9847 protein_coding protein_coding MGP_BALBcJ_T0026898.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93820072 93824223 - Gm9847 protein_coding processed_transcript MGP_BALBcJ_T0026899.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93820587 93823767 - MGP_BALBcJ_P0026899 Gm9847 protein_coding protein_coding MGP_BALBcJ_T0026900.1 MGP_BALBcJ_G0017610.1 mouse_genomes_project 10 93822645 93823554 - Gm9847 protein_coding processed_transcript MGP_BALBcJ_T0024871.1 MGP_BALBcJ_G0017079.1 mouse_genomes_project 10 31722964 31748095 - Nt5dc1 protein_coding processed_transcript MGP_BALBcJ_T0024873.1 MGP_BALBcJ_G0017079.1 mouse_genomes_project 10 31737875 31855280 - MGP_BALBcJ_P0024873 Nt5dc1 protein_coding protein_coding MGP_BALBcJ_T0024874.1 MGP_BALBcJ_G0017079.1 mouse_genomes_project 10 31737875 31855267 - MGP_BALBcJ_P0024874 Nt5dc1 protein_coding protein_coding MGP_BALBcJ_T0024875.1 MGP_BALBcJ_G0017079.1 mouse_genomes_project 10 31738531 31855256 - Nt5dc1 protein_coding processed_transcript MGP_BALBcJ_T0024877.1 MGP_BALBcJ_G0017079.1 mouse_genomes_project 10 31833202 31855209 - MGP_BALBcJ_P0024877 Nt5dc1 protein_coding protein_coding MGP_BALBcJ_T0025079.1 MGP_BALBcJ_G0017141.1 mouse_genomes_project 10 41955779 42051242 + MGP_BALBcJ_P0025079 Atg5 protein_coding protein_coding MGP_BALBcJ_T0026257.1 MGP_BALBcJ_G0017450.1 mouse_genomes_project 10 78605830 78618731 + MGP_BALBcJ_P0026257 Scamp4 protein_coding protein_coding MGP_BALBcJ_T0026258.1 MGP_BALBcJ_G0017450.1 mouse_genomes_project 10 78606201 78617911 + MGP_BALBcJ_P0026258 Scamp4 protein_coding protein_coding MGP_BALBcJ_T0025131.1 MGP_BALBcJ_G0017161.1 mouse_genomes_project 10 50102203 50102290 + MGP_BALBcJ_P0025131 Gm26741 protein_coding protein_coding MGP_BALBcJ_T0099196.1 MGP_BALBcJ_G0037232.1 mouse_genomes_project 10 64954204 64954305 - Gm26359 snRNA snRNA MGP_BALBcJ_T0027349.1 MGP_BALBcJ_G0017768.1 mouse_genomes_project 10 126434142 126439942 - MGP_BALBcJ_P0027349 Nab2 protein_coding protein_coding MGP_BALBcJ_T0027350.1 MGP_BALBcJ_G0017768.1 mouse_genomes_project 10 126434143 126439864 - MGP_BALBcJ_P0027350 Nab2 protein_coding protein_coding MGP_BALBcJ_T0027351.1 MGP_BALBcJ_G0017768.1 mouse_genomes_project 10 126438156 126438713 - MGP_BALBcJ_P0027351 Nab2 protein_coding protein_coding MGP_BALBcJ_T0027352.1 MGP_BALBcJ_G0017768.1 mouse_genomes_project 10 126438215 126441799 - MGP_BALBcJ_P0027352 Nab2 protein_coding protein_coding MGP_BALBcJ_T0026212.1 MGP_BALBcJ_G0017439.1 mouse_genomes_project 10 78353371 78362739 + MGP_BALBcJ_P0026212 Plk5 protein_coding protein_coding MGP_BALBcJ_T0026213.1 MGP_BALBcJ_G0017439.1 mouse_genomes_project 10 78353371 78362739 + MGP_BALBcJ_P0026213 Plk5 protein_coding protein_coding MGP_BALBcJ_T0026214.1 MGP_BALBcJ_G0017439.1 mouse_genomes_project 10 78354889 78357440 + Plk5 protein_coding retained_intron MGP_BALBcJ_T0026215.1 MGP_BALBcJ_G0017439.1 mouse_genomes_project 10 78356182 78357698 + Plk5 protein_coding retained_intron MGP_BALBcJ_T0025721.1 MGP_BALBcJ_G0017299.1 mouse_genomes_project 10 73546061 73547862 - MGP_BALBcJ_P0025721 Ddt protein_coding protein_coding MGP_BALBcJ_T0025722.1 MGP_BALBcJ_G0017299.1 mouse_genomes_project 10 73546064 73548242 - MGP_BALBcJ_P0025722 Ddt protein_coding protein_coding MGP_BALBcJ_T0025080.1 MGP_BALBcJ_G0017142.1 mouse_genomes_project 10 42126139 42148363 - MGP_BALBcJ_P0025080 Prdm1 protein_coding protein_coding MGP_BALBcJ_T0025081.1 MGP_BALBcJ_G0017142.1 mouse_genomes_project 10 42127162 42146825 - MGP_BALBcJ_P0025081 Prdm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0025082.1 MGP_BALBcJ_G0017142.1 mouse_genomes_project 10 42127255 42148302 - MGP_BALBcJ_P0025082 Prdm1 protein_coding protein_coding MGP_BALBcJ_T0025083.1 MGP_BALBcJ_G0017142.1 mouse_genomes_project 10 42135669 42218862 - Prdm1 protein_coding processed_transcript MGP_BALBcJ_T0024860.1 MGP_BALBcJ_G0017070.1 mouse_genomes_project 10 31339926 31375028 - MGP_BALBcJ_P0024860 Zufsp protein_coding unknown_likely_coding MGP_BALBcJ_T0024861.1 MGP_BALBcJ_G0017070.1 mouse_genomes_project 10 31350685 31375004 - MGP_BALBcJ_P0024861 Zufsp protein_coding protein_coding MGP_BALBcJ_T0026175.1 MGP_BALBcJ_G0017431.1 mouse_genomes_project 10 78253557 78256419 - MGP_BALBcJ_P0026175 Gamt protein_coding protein_coding MGP_BALBcJ_T0026176.1 MGP_BALBcJ_G0017431.1 mouse_genomes_project 10 78253570 78256375 - MGP_BALBcJ_P0026176 Gamt protein_coding protein_coding MGP_BALBcJ_T0026177.1 MGP_BALBcJ_G0017431.1 mouse_genomes_project 10 78253983 78256325 - Gamt protein_coding retained_intron MGP_BALBcJ_T0026178.1 MGP_BALBcJ_G0017431.1 mouse_genomes_project 10 78254199 78254696 - Gamt protein_coding retained_intron MGP_BALBcJ_T0102124.1 MGP_BALBcJ_G0039941.1 mouse_genomes_project 10 128486732 128487495 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0027268.1 MGP_BALBcJ_G0017744.1 mouse_genomes_project 10 125819389 125822334 - MGP_BALBcJ_P0027268 Tspan31 protein_coding protein_coding MGP_BALBcJ_T0025581.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68303528 68343649 - MGP_BALBcJ_P0025581 Phyhipl protein_coding protein_coding MGP_BALBcJ_T0025582.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68303984 68400657 - MGP_BALBcJ_P0025582 Phyhipl protein_coding protein_coding MGP_BALBcJ_T0025583.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68308146 68343624 - Phyhipl protein_coding retained_intron MGP_BALBcJ_T0025584.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68312102 68343832 - Phyhipl protein_coding retained_intron MGP_BALBcJ_T0025585.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68315190 68400664 - MGP_BALBcJ_P0025585 Phyhipl protein_coding protein_coding MGP_BALBcJ_T0025586.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68345590 68396624 - Phyhipl protein_coding processed_transcript MGP_BALBcJ_T0025587.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68345674 68400662 - Phyhipl protein_coding processed_transcript MGP_BALBcJ_T0025588.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68351629 68352104 - Phyhipl protein_coding processed_transcript MGP_BALBcJ_T0025589.1 MGP_BALBcJ_G0017276.1 mouse_genomes_project 10 68352139 68370859 - Phyhipl protein_coding processed_transcript MGP_BALBcJ_T0000831.1 MGP_BALBcJ_G0000763.1 mouse_genomes_project 10 119406878 119407610 + TEC TEC MGP_BALBcJ_T0012400.1 MGP_BALBcJ_G0010497.1 mouse_genomes_project 10 71426968 71427517 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099181.1 MGP_BALBcJ_G0037217.1 mouse_genomes_project 10 42286195 42286283 - Gm22087 snRNA snRNA MGP_BALBcJ_T0025736.1 MGP_BALBcJ_G0017306.1 mouse_genomes_project 10 73673587 73676131 + MGP_BALBcJ_P0025736 Derl3 protein_coding protein_coding MGP_BALBcJ_T0025864.1 MGP_BALBcJ_G0017340.1 mouse_genomes_project 10 75525261 75525594 + MGP_BALBcJ_P0025864 Gm10272 protein_coding protein_coding MGP_BALBcJ_T0027529.1 MGP_BALBcJ_G0017842.1 mouse_genomes_project 10 128093753 128095269 + MGP_BALBcJ_P0027529 Olfr775 protein_coding protein_coding MGP_BALBcJ_T0027025.1 MGP_BALBcJ_G0017662.1 mouse_genomes_project 10 109963002 109987586 + MGP_BALBcJ_P0027025 Nap1l1 protein_coding unknown_likely_coding MGP_BALBcJ_T0027026.1 MGP_BALBcJ_G0017662.1 mouse_genomes_project 10 109970449 109987579 + MGP_BALBcJ_P0027026 Nap1l1 protein_coding protein_coding MGP_BALBcJ_T0027518.1 MGP_BALBcJ_G0017835.1 mouse_genomes_project 10 127916099 127921611 - MGP_BALBcJ_P0027518 Olfr767 protein_coding protein_coding MGP_BALBcJ_T0003074.1 MGP_BALBcJ_G0002865.1 mouse_genomes_project 10 115066986 115068822 + Kcnmb4os2 antisense antisense MGP_BALBcJ_T0003075.1 MGP_BALBcJ_G0002865.1 mouse_genomes_project 10 115067867 115069159 + Kcnmb4os2 antisense antisense MGP_BALBcJ_T0003076.1 MGP_BALBcJ_G0002865.1 mouse_genomes_project 10 115068184 115068827 + Kcnmb4os2 antisense antisense MGP_BALBcJ_T0009580.1 MGP_BALBcJ_G0007705.1 mouse_genomes_project 10 78835206 78835279 + Mir1982 miRNA miRNA MGP_BALBcJ_T0026907.1 MGP_BALBcJ_G0017618.1 mouse_genomes_project 10 95949337 95989024 + MGP_BALBcJ_P0026907 Dcn protein_coding protein_coding MGP_BALBcJ_T0026908.1 MGP_BALBcJ_G0017618.1 mouse_genomes_project 10 95952188 95989024 + MGP_BALBcJ_P0026908 Dcn protein_coding protein_coding MGP_BALBcJ_T0026252.1 MGP_BALBcJ_G0017448.1 mouse_genomes_project 10 78586355 78592982 - MGP_BALBcJ_P0026252 Abhd17a protein_coding protein_coding MGP_BALBcJ_T0026253.1 MGP_BALBcJ_G0017448.1 mouse_genomes_project 10 78586356 78592965 - MGP_BALBcJ_P0026253 Abhd17a protein_coding protein_coding MGP_BALBcJ_T0026254.1 MGP_BALBcJ_G0017448.1 mouse_genomes_project 10 78586357 78589326 - MGP_BALBcJ_P0026254 Abhd17a protein_coding protein_coding MGP_BALBcJ_T0026255.1 MGP_BALBcJ_G0017448.1 mouse_genomes_project 10 78589380 78592956 - MGP_BALBcJ_P0026255 Abhd17a protein_coding protein_coding MGP_BALBcJ_T0003050.1 MGP_BALBcJ_G0002848.1 mouse_genomes_project 10 80295407 80319762 + Gm15608 antisense antisense MGP_BALBcJ_T0003051.1 MGP_BALBcJ_G0002848.1 mouse_genomes_project 10 80301674 80319743 + Gm15608 antisense antisense MGP_BALBcJ_T0025085.1 MGP_BALBcJ_G0017144.1 mouse_genomes_project 10 42868480 43011993 + MGP_BALBcJ_P0025085 Popdc3 protein_coding protein_coding MGP_BALBcJ_T0025086.1 MGP_BALBcJ_G0017144.1 mouse_genomes_project 10 42986080 43015331 + MGP_BALBcJ_P0025086 Popdc3 protein_coding protein_coding MGP_BALBcJ_T0025087.1 MGP_BALBcJ_G0017144.1 mouse_genomes_project 10 42986177 43014996 + MGP_BALBcJ_P0025087 Popdc3 protein_coding protein_coding MGP_BALBcJ_T0027134.1 MGP_BALBcJ_G0017703.1 mouse_genomes_project 10 116438725 116475118 - MGP_BALBcJ_P0027134 Rap1b protein_coding protein_coding MGP_BALBcJ_T0006074.1 MGP_BALBcJ_G0005088.1 mouse_genomes_project 10 62778192 62779034 - Gm28881 lincRNA lincRNA MGP_BALBcJ_T0100424.1 MGP_BALBcJ_G0038460.1 mouse_genomes_project 10 21165200 21165329 - Snora33 snoRNA snoRNA MGP_BALBcJ_T0025816.1 MGP_BALBcJ_G0017330.1 mouse_genomes_project 10 74851670 74968155 - MGP_BALBcJ_P0025816 Col18a1 protein_coding protein_coding MGP_BALBcJ_T0025817.1 MGP_BALBcJ_G0017330.1 mouse_genomes_project 10 74851673 74914850 - MGP_BALBcJ_P0025817 Col18a1 protein_coding protein_coding MGP_BALBcJ_T0025818.1 MGP_BALBcJ_G0017330.1 mouse_genomes_project 10 74852508 74914879 - MGP_BALBcJ_P0025818 Col18a1 protein_coding protein_coding MGP_BALBcJ_T0025819.1 MGP_BALBcJ_G0017330.1 mouse_genomes_project 10 74880217 74889295 - MGP_BALBcJ_P0025819 Col18a1 protein_coding protein_coding MGP_BALBcJ_T0025820.1 MGP_BALBcJ_G0017330.1 mouse_genomes_project 10 74896175 74915120 - MGP_BALBcJ_P0025820 Col18a1 protein_coding protein_coding MGP_BALBcJ_T0099183.1 MGP_BALBcJ_G0037219.1 mouse_genomes_project 10 42944151 42944214 + Gm27723 snRNA snRNA MGP_BALBcJ_T0006060.1 MGP_BALBcJ_G0005074.1 mouse_genomes_project 10 21842885 21848050 + Gm15271 lincRNA lincRNA MGP_BALBcJ_T0099174.1 MGP_BALBcJ_G0037210.1 mouse_genomes_project 10 26807254 26807361 + Gm25596 snRNA snRNA MGP_BALBcJ_T0026018.1 MGP_BALBcJ_G0017398.1 mouse_genomes_project 10 77737868 77746292 - MGP_BALBcJ_P0026018 Rnf126 protein_coding protein_coding MGP_BALBcJ_T0009556.1 MGP_BALBcJ_G0007681.1 mouse_genomes_project 10 43507598 43507713 - Gm27410 miRNA miRNA MGP_BALBcJ_T0024638.1 MGP_BALBcJ_G0016981.1 mouse_genomes_project 10 16716018 16734228 + MGP_BALBcJ_P0024638 Ifngr1 protein_coding protein_coding MGP_BALBcJ_T0024639.1 MGP_BALBcJ_G0016981.1 mouse_genomes_project 10 16716027 16721920 + Ifngr1 protein_coding retained_intron MGP_BALBcJ_T0024640.1 MGP_BALBcJ_G0016981.1 mouse_genomes_project 10 16716100 16727756 + MGP_BALBcJ_P0024640 Ifngr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024641.1 MGP_BALBcJ_G0016981.1 mouse_genomes_project 10 16716122 16725506 + MGP_BALBcJ_P0024641 Ifngr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024642.1 MGP_BALBcJ_G0016981.1 mouse_genomes_project 10 16716131 16727776 + MGP_BALBcJ_P0024642 Ifngr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024643.1 MGP_BALBcJ_G0016981.1 mouse_genomes_project 10 16729920 16733254 + Ifngr1 protein_coding retained_intron MGP_BALBcJ_T0024652.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17050011 17263516 + MGP_BALBcJ_P0024652 Map3k5 protein_coding protein_coding MGP_BALBcJ_T0024653.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17050065 17262432 + MGP_BALBcJ_P0024653 Map3k5 protein_coding protein_coding MGP_BALBcJ_T0024654.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17050755 17219264 + MGP_BALBcJ_P0024654 Map3k5 protein_coding protein_coding MGP_BALBcJ_T0024655.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17066697 17130316 + MGP_BALBcJ_P0024655 Map3k5 protein_coding protein_coding MGP_BALBcJ_T0024656.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17218630 17224523 + Map3k5 protein_coding processed_transcript MGP_BALBcJ_T0024657.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17245498 17248383 + Map3k5 protein_coding retained_intron MGP_BALBcJ_T0024658.1 MGP_BALBcJ_G0016987.1 mouse_genomes_project 10 17248382 17259315 + Map3k5 protein_coding retained_intron MGP_BALBcJ_T0000814.1 MGP_BALBcJ_G0000747.1 mouse_genomes_project 10 76481897 76484650 - TEC TEC MGP_BALBcJ_T0098301.1 MGP_BALBcJ_G0036355.1 mouse_genomes_project 10 56742670 56747149 + pseudogene pseudogene MGP_BALBcJ_T0100445.1 MGP_BALBcJ_G0038481.1 mouse_genomes_project 10 60400388 60400453 - Snord98 snoRNA snoRNA MGP_BALBcJ_T0026297.1 MGP_BALBcJ_G0017463.1 mouse_genomes_project 10 78841019 78852252 - MGP_BALBcJ_P0026297 Lingo3 protein_coding protein_coding MGP_BALBcJ_T0027557.1 MGP_BALBcJ_G0017863.1 mouse_genomes_project 10 128599870 128600797 - MGP_BALBcJ_P0027557 Olfr803 protein_coding protein_coding MGP_BALBcJ_T0098447.1 MGP_BALBcJ_G0036501.1 mouse_genomes_project 10 76182008 76182127 + n-R5s77 rRNA rRNA MGP_BALBcJ_T0009581.1 MGP_BALBcJ_G0007706.1 mouse_genomes_project 10 79115398 79115458 - Mir5615-1 miRNA miRNA MGP_BALBcJ_T0025466.1 MGP_BALBcJ_G0017256.1 mouse_genomes_project 10 61580854 61583423 - MGP_BALBcJ_P0025466 Gm10118 protein_coding protein_coding MGP_BALBcJ_T0025951.1 MGP_BALBcJ_G0017373.1 mouse_genomes_project 10 76734951 76740178 + MGP_BALBcJ_P0025951 protein_coding protein_coding MGP_BALBcJ_T0027272.1 MGP_BALBcJ_G0017747.1 mouse_genomes_project 10 125920922 125928107 + MGP_BALBcJ_P0027272 B4galnt1 protein_coding protein_coding MGP_BALBcJ_T0025459.1 MGP_BALBcJ_G0017254.1 mouse_genomes_project 10 61049569 61068636 + Dnajc12 protein_coding retained_intron MGP_BALBcJ_T0025460.1 MGP_BALBcJ_G0017254.1 mouse_genomes_project 10 61049696 61068605 + MGP_BALBcJ_P0025460 Dnajc12 protein_coding protein_coding MGP_BALBcJ_T0027107.1 MGP_BALBcJ_G0017696.1 mouse_genomes_project 10 115878196 115883811 - MGP_BALBcJ_P0027107 Lyz2 protein_coding protein_coding MGP_BALBcJ_T0099172.1 MGP_BALBcJ_G0037208.1 mouse_genomes_project 10 20541480 20541587 - Gm24655 snRNA snRNA MGP_BALBcJ_T0009561.1 MGP_BALBcJ_G0007686.1 mouse_genomes_project 10 58499340 58499431 + Mir6408 miRNA miRNA MGP_BALBcJ_T0025183.1 MGP_BALBcJ_G0017181.1 mouse_genomes_project 10 55751979 55757664 - MGP_BALBcJ_P0025183 protein_coding protein_coding MGP_BALBcJ_T0099212.1 MGP_BALBcJ_G0037248.1 mouse_genomes_project 10 102488299 102488408 + Gm25143 snRNA snRNA MGP_BALBcJ_T0025107.1 MGP_BALBcJ_G0017150.1 mouse_genomes_project 10 48646777 48741047 + MGP_BALBcJ_P0025107 Sim1 protein_coding protein_coding MGP_BALBcJ_T0006093.1 MGP_BALBcJ_G0005101.1 mouse_genomes_project 10 82710579 82719722 + 4930463O16Rik lincRNA lincRNA MGP_BALBcJ_T0006094.1 MGP_BALBcJ_G0005101.1 mouse_genomes_project 10 82711020 82715013 + 4930463O16Rik lincRNA lincRNA MGP_BALBcJ_T0102120.1 MGP_BALBcJ_G0039937.1 mouse_genomes_project 10 127899724 127900654 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0025718.1 MGP_BALBcJ_G0017297.1 mouse_genomes_project 10 73410517 73417907 - MGP_BALBcJ_P0025718 Susd2 protein_coding protein_coding MGP_BALBcJ_T0025719.1 MGP_BALBcJ_G0017297.1 mouse_genomes_project 10 73410517 73417907 - MGP_BALBcJ_P0025719 Susd2 protein_coding protein_coding MGP_BALBcJ_T0027332.1 MGP_BALBcJ_G0017764.1 mouse_genomes_project 10 126288025 126293701 - MGP_BALBcJ_P0027332 Shmt2 protein_coding protein_coding MGP_BALBcJ_T0024779.1 MGP_BALBcJ_G0017038.1 mouse_genomes_project 10 22790085 22917359 + MGP_BALBcJ_P0024779 Epb41l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0024780.1 MGP_BALBcJ_G0017038.1 mouse_genomes_project 10 22790088 22981615 + MGP_BALBcJ_P0024780 Epb41l2 protein_coding protein_coding MGP_BALBcJ_T0024781.1 MGP_BALBcJ_G0017038.1 mouse_genomes_project 10 22840085 22981615 + MGP_BALBcJ_P0024781 Epb41l2 protein_coding protein_coding MGP_BALBcJ_T0024782.1 MGP_BALBcJ_G0017038.1 mouse_genomes_project 10 22919281 22981618 + MGP_BALBcJ_P0024782 Epb41l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0009593.1 MGP_BALBcJ_G0007718.1 mouse_genomes_project 10 91811865 91811921 + Mir7688 miRNA miRNA MGP_BALBcJ_T0012423.1 MGP_BALBcJ_G0010520.1 mouse_genomes_project 10 126703778 126704070 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006136.1 MGP_BALBcJ_G0005124.1 mouse_genomes_project 10 118053765 118067082 + 1700025F24Rik lincRNA lincRNA MGP_BALBcJ_T0026596.1 MGP_BALBcJ_G0017541.1 mouse_genomes_project 10 83344072 83352666 - MGP_BALBcJ_P0026596 Mterf2 protein_coding protein_coding MGP_BALBcJ_T0025162.1 MGP_BALBcJ_G0017177.1 mouse_genomes_project 10 55328291 55345040 - MGP_BALBcJ_P0025162 Serinc1 protein_coding protein_coding MGP_BALBcJ_T0025163.1 MGP_BALBcJ_G0017177.1 mouse_genomes_project 10 55335548 55344938 - MGP_BALBcJ_P0025163 Serinc1 protein_coding protein_coding MGP_BALBcJ_T0025164.1 MGP_BALBcJ_G0017177.1 mouse_genomes_project 10 55335697 55344920 - MGP_BALBcJ_P0025164 Serinc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025165.1 MGP_BALBcJ_G0017177.1 mouse_genomes_project 10 55337733 55344987 - Serinc1 protein_coding retained_intron MGP_BALBcJ_T0025166.1 MGP_BALBcJ_G0017177.1 mouse_genomes_project 10 55337739 55344919 - Serinc1 protein_coding retained_intron MGP_BALBcJ_T0012381.1 MGP_BALBcJ_G0010478.1 mouse_genomes_project 10 40043361 40043538 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027564.1 MGP_BALBcJ_G0017868.1 mouse_genomes_project 10 128688817 128690466 + MGP_BALBcJ_P0027564 protein_coding protein_coding MGP_BALBcJ_T0027566.1 MGP_BALBcJ_G0017868.1 mouse_genomes_project 10 128690059 128690684 + MGP_BALBcJ_P0027566 protein_coding protein_coding MGP_BALBcJ_T0025264.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57867528 58221889 - MGP_BALBcJ_P0025264 Cdh23 protein_coding protein_coding MGP_BALBcJ_T0025265.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57867528 58221889 - MGP_BALBcJ_P0025265 Cdh23 protein_coding protein_coding MGP_BALBcJ_T0025266.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57867530 58261499 - MGP_BALBcJ_P0025266 Cdh23 protein_coding protein_coding MGP_BALBcJ_T0025267.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57867530 58261499 - MGP_BALBcJ_P0025267 Cdh23 protein_coding protein_coding MGP_BALBcJ_T0025268.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57867530 58261499 - MGP_BALBcJ_P0025268 Cdh23 protein_coding protein_coding MGP_BALBcJ_T0025269.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57868065 57886277 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0025270.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57868065 57886277 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0025271.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57868090 58221889 - Cdh23 protein_coding retained_intron MGP_BALBcJ_T0025272.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57868090 58221889 - Cdh23 protein_coding retained_intron MGP_BALBcJ_T0025273.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57868143 57870441 - Cdh23 protein_coding retained_intron MGP_BALBcJ_T0025280.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57940351 57951937 - Cdh23 protein_coding retained_intron MGP_BALBcJ_T0025281.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57941673 57971318 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0025282.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 57941767 57945094 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0025284.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 58143865 58261499 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0025285.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 58193031 58217589 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0025286.1 MGP_BALBcJ_G0017206.1 mouse_genomes_project 10 58221821 58252266 - Cdh23 protein_coding processed_transcript MGP_BALBcJ_T0027585.1 MGP_BALBcJ_G0017884.1 mouse_genomes_project 10 129057195 129073218 - MGP_BALBcJ_P0027585 protein_coding protein_coding MGP_BALBcJ_T0024830.1 MGP_BALBcJ_G0017055.1 mouse_genomes_project 10 27639220 27643746 - MGP_BALBcJ_P0024830 Cenpw protein_coding protein_coding MGP_BALBcJ_T0006083.1 MGP_BALBcJ_G0005093.1 mouse_genomes_project 10 69050008 69053231 + Gm20609 lincRNA lincRNA MGP_BALBcJ_T0098448.1 MGP_BALBcJ_G0036502.1 mouse_genomes_project 10 76394364 76394480 + Gm25164 rRNA rRNA MGP_BALBcJ_T0012385.1 MGP_BALBcJ_G0010482.1 mouse_genomes_project 10 42693407 42694385 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024688.1 MGP_BALBcJ_G0016996.1 mouse_genomes_project 10 18422950 18437989 + MGP_BALBcJ_P0024688 Gm9923 protein_coding protein_coding MGP_BALBcJ_T0024627.1 MGP_BALBcJ_G0016975.1 mouse_genomes_project 10 15668842 15674760 - MGP_BALBcJ_P0024627 Hebp2 protein_coding protein_coding MGP_BALBcJ_T0026788.1 MGP_BALBcJ_G0017585.1 mouse_genomes_project 10 89448239 89467857 + MGP_BALBcJ_P0026788 Ikbip protein_coding protein_coding MGP_BALBcJ_T0026789.1 MGP_BALBcJ_G0017585.1 mouse_genomes_project 10 89448356 89463888 + MGP_BALBcJ_P0026789 Ikbip protein_coding protein_coding MGP_BALBcJ_T0026790.1 MGP_BALBcJ_G0017585.1 mouse_genomes_project 10 89448405 89458465 + Ikbip protein_coding processed_transcript MGP_BALBcJ_T0026791.1 MGP_BALBcJ_G0017585.1 mouse_genomes_project 10 89448419 89459048 + Ikbip protein_coding retained_intron MGP_BALBcJ_T0026792.1 MGP_BALBcJ_G0017585.1 mouse_genomes_project 10 89461201 89467345 + Ikbip protein_coding processed_transcript MGP_BALBcJ_T0027591.1 MGP_BALBcJ_G0017889.1 mouse_genomes_project 10 129278150 129322175 + MGP_BALBcJ_P0027591 Tespa1 protein_coding protein_coding MGP_BALBcJ_T0000812.1 MGP_BALBcJ_G0000745.1 mouse_genomes_project 10 70919719 70920112 - TEC TEC MGP_BALBcJ_T0027202.1 MGP_BALBcJ_G0017725.1 mouse_genomes_project 10 120461029 120473775 + MGP_BALBcJ_P0027202 BC048403 protein_coding protein_coding MGP_BALBcJ_T0027203.1 MGP_BALBcJ_G0017725.1 mouse_genomes_project 10 120461030 120473788 + MGP_BALBcJ_P0027203 BC048403 protein_coding protein_coding MGP_BALBcJ_T0027204.1 MGP_BALBcJ_G0017725.1 mouse_genomes_project 10 120471813 120473279 + BC048403 protein_coding processed_transcript MGP_BALBcJ_T0026926.1 MGP_BALBcJ_G0017629.1 mouse_genomes_project 10 97714060 97718318 + MGP_BALBcJ_P0026926 Dusp6 protein_coding protein_coding MGP_BALBcJ_T0024910.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36909261 37057983 + MGP_BALBcJ_P0024910 Fyn protein_coding protein_coding MGP_BALBcJ_T0024911.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36910170 37108406 + MGP_BALBcJ_P0024911 Fyn protein_coding protein_coding MGP_BALBcJ_T0024912.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36910209 37107448 + MGP_BALBcJ_P0024912 Fyn protein_coding protein_coding MGP_BALBcJ_T0024913.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36960540 37054174 + MGP_BALBcJ_P0024913 Fyn protein_coding protein_coding MGP_BALBcJ_T0024914.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36987855 37108399 + MGP_BALBcJ_P0024914 Fyn protein_coding protein_coding MGP_BALBcJ_T0024915.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36996878 37107380 + MGP_BALBcJ_P0024915 Fyn protein_coding protein_coding MGP_BALBcJ_T0024916.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 36996988 37107380 + MGP_BALBcJ_P0024916 Fyn protein_coding protein_coding MGP_BALBcJ_T0024917.1 MGP_BALBcJ_G0017091.1 mouse_genomes_project 10 37076058 37094204 + Fyn protein_coding processed_transcript MGP_BALBcJ_T0026994.1 MGP_BALBcJ_G0017652.1 mouse_genomes_project 10 106235983 106381579 - MGP_BALBcJ_P0026994 Otogl protein_coding protein_coding MGP_BALBcJ_T0026915.1 MGP_BALBcJ_G0017624.1 mouse_genomes_project 10 96190697 96192579 - MGP_BALBcJ_P0026915 C030005K15Rik protein_coding protein_coding MGP_BALBcJ_T0027530.1 MGP_BALBcJ_G0017843.1 mouse_genomes_project 10 128106364 128107303 + MGP_BALBcJ_P0027530 Olfr776 protein_coding protein_coding MGP_BALBcJ_T0024863.1 MGP_BALBcJ_G0017072.1 mouse_genomes_project 10 31419947 31449599 - MGP_BALBcJ_P0024863 Rwdd1 protein_coding protein_coding MGP_BALBcJ_T0024864.1 MGP_BALBcJ_G0017072.1 mouse_genomes_project 10 31419953 31424638 - Rwdd1 protein_coding retained_intron MGP_BALBcJ_T0026075.1 MGP_BALBcJ_G0017412.1 mouse_genomes_project 10 77909031 77937786 + MGP_BALBcJ_P0026075 Arid3a protein_coding protein_coding MGP_BALBcJ_T0026076.1 MGP_BALBcJ_G0017412.1 mouse_genomes_project 10 77909127 77937479 + MGP_BALBcJ_P0026076 Arid3a protein_coding protein_coding MGP_BALBcJ_T0026077.1 MGP_BALBcJ_G0017412.1 mouse_genomes_project 10 77909329 77937471 + MGP_BALBcJ_P0026077 Arid3a protein_coding protein_coding MGP_BALBcJ_T0026078.1 MGP_BALBcJ_G0017412.1 mouse_genomes_project 10 77912281 77913076 + MGP_BALBcJ_P0026078 Arid3a protein_coding protein_coding MGP_BALBcJ_T0026079.1 MGP_BALBcJ_G0017412.1 mouse_genomes_project 10 77928117 77935411 + Arid3a protein_coding processed_transcript MGP_BALBcJ_T0012354.1 MGP_BALBcJ_G0010451.1 mouse_genomes_project 10 824063 825288 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009578.1 MGP_BALBcJ_G0007703.1 mouse_genomes_project 10 78381637 78381720 + Gm22721 miRNA miRNA MGP_BALBcJ_T0009555.1 MGP_BALBcJ_G0007680.1 mouse_genomes_project 10 42785552 42785632 - Gm23766 miRNA miRNA MGP_BALBcJ_T0012371.1 MGP_BALBcJ_G0010468.1 mouse_genomes_project 10 21983502 21984244 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0024880.1 MGP_BALBcJ_G0017083.1 mouse_genomes_project 10 33971664 34294459 + MGP_BALBcJ_P0024880 Hs3st5 protein_coding protein_coding MGP_BALBcJ_T0024881.1 MGP_BALBcJ_G0017083.1 mouse_genomes_project 10 33971669 34295075 + MGP_BALBcJ_P0024881 Hs3st5 protein_coding protein_coding MGP_BALBcJ_T0024882.1 MGP_BALBcJ_G0017083.1 mouse_genomes_project 10 33971739 34162791 + Hs3st5 protein_coding retained_intron MGP_BALBcJ_T0024883.1 MGP_BALBcJ_G0017083.1 mouse_genomes_project 10 33971876 34295083 + MGP_BALBcJ_P0024883 Hs3st5 protein_coding protein_coding MGP_BALBcJ_T0024884.1 MGP_BALBcJ_G0017083.1 mouse_genomes_project 10 33972257 34272911 + Hs3st5 protein_coding processed_transcript MGP_BALBcJ_T0024933.1 MGP_BALBcJ_G0017097.1 mouse_genomes_project 10 37528174 37559132 - MGP_BALBcJ_P0024933 Mfsd4b5 protein_coding protein_coding MGP_BALBcJ_T0024934.1 MGP_BALBcJ_G0017097.1 mouse_genomes_project 10 37540115 37559135 - MGP_BALBcJ_P0024934 Mfsd4b5 protein_coding protein_coding MGP_BALBcJ_T0024935.1 MGP_BALBcJ_G0017097.1 mouse_genomes_project 10 37542105 37559128 - MGP_BALBcJ_P0024935 Mfsd4b5 protein_coding protein_coding MGP_BALBcJ_T0024936.1 MGP_BALBcJ_G0017097.1 mouse_genomes_project 10 37545031 37559129 - MGP_BALBcJ_P0024936 Mfsd4b5 protein_coding protein_coding MGP_BALBcJ_T0024937.1 MGP_BALBcJ_G0017097.1 mouse_genomes_project 10 37546006 37546660 - MGP_BALBcJ_P0024937 Mfsd4b5 protein_coding protein_coding MGP_BALBcJ_T0003013.1 MGP_BALBcJ_G0002818.1 mouse_genomes_project 10 40802964 40803258 + antisense antisense MGP_BALBcJ_T0026963.1 MGP_BALBcJ_G0017640.1 mouse_genomes_project 10 101541339 101562914 - MGP_BALBcJ_P0026963 Alx1 protein_coding protein_coding MGP_BALBcJ_T0026964.1 MGP_BALBcJ_G0017640.1 mouse_genomes_project 10 101541340 101562759 - MGP_BALBcJ_P0026964 Alx1 protein_coding protein_coding MGP_BALBcJ_T0026965.1 MGP_BALBcJ_G0017640.1 mouse_genomes_project 10 101541644 101556770 - Alx1 protein_coding processed_transcript MGP_BALBcJ_T0024820.1 MGP_BALBcJ_G0017052.1 mouse_genomes_project 10 26771511 26802725 + MGP_BALBcJ_P0024820 Echdc1 protein_coding protein_coding MGP_BALBcJ_T0024821.1 MGP_BALBcJ_G0017052.1 mouse_genomes_project 10 26771626 26801509 + MGP_BALBcJ_P0024821 Echdc1 protein_coding protein_coding MGP_BALBcJ_T0024822.1 MGP_BALBcJ_G0017052.1 mouse_genomes_project 10 26771845 26803826 + MGP_BALBcJ_P0024822 Echdc1 protein_coding protein_coding MGP_BALBcJ_T0024823.1 MGP_BALBcJ_G0017052.1 mouse_genomes_project 10 26772008 26791765 + Echdc1 protein_coding processed_transcript MGP_BALBcJ_T0024984.1 MGP_BALBcJ_G0017114.1 mouse_genomes_project 10 39083745 39107550 + MGP_BALBcJ_P0024984 Ppil6 protein_coding protein_coding MGP_BALBcJ_T0003081.1 MGP_BALBcJ_G0002868.1 mouse_genomes_project 10 118390542 118406264 - Grip1os2 antisense antisense MGP_BALBcJ_T0012355.1 MGP_BALBcJ_G0010452.1 mouse_genomes_project 10 871191 871635 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098305.1 MGP_BALBcJ_G0036359.1 mouse_genomes_project 10 73362553 73363065 - pseudogene pseudogene MGP_BALBcJ_T0027435.1 MGP_BALBcJ_G0017800.1 mouse_genomes_project 10 127172224 127179158 - MGP_BALBcJ_P0027435 Coq10a protein_coding protein_coding MGP_BALBcJ_T0026299.1 MGP_BALBcJ_G0017465.1 mouse_genomes_project 10 78863486 78877185 + MGP_BALBcJ_P0026299 Sppl2b protein_coding protein_coding MGP_BALBcJ_T0027297.1 MGP_BALBcJ_G0017756.1 mouse_genomes_project 10 126053379 126069529 - MGP_BALBcJ_P0027297 Mars protein_coding protein_coding MGP_BALBcJ_T0027298.1 MGP_BALBcJ_G0017756.1 mouse_genomes_project 10 126053380 126069529 - MGP_BALBcJ_P0027298 Mars protein_coding protein_coding MGP_BALBcJ_T0027299.1 MGP_BALBcJ_G0017756.1 mouse_genomes_project 10 126053384 126069421 - Mars protein_coding retained_intron MGP_BALBcJ_T0027300.1 MGP_BALBcJ_G0017756.1 mouse_genomes_project 10 126053384 126055621 - MGP_BALBcJ_P0027300 Mars protein_coding protein_coding MGP_BALBcJ_T0027301.1 MGP_BALBcJ_G0017756.1 mouse_genomes_project 10 126053507 126055532 - Mars protein_coding retained_intron MGP_BALBcJ_T0027302.1 MGP_BALBcJ_G0017756.1 mouse_genomes_project 10 126065799 126066737 - Mars protein_coding retained_intron MGP_BALBcJ_T0026200.1 MGP_BALBcJ_G0017437.1 mouse_genomes_project 10 78325860 78332349 + MGP_BALBcJ_P0026200 Reep6 protein_coding protein_coding MGP_BALBcJ_T0026201.1 MGP_BALBcJ_G0017437.1 mouse_genomes_project 10 78325860 78332349 + MGP_BALBcJ_P0026201 Reep6 protein_coding protein_coding MGP_BALBcJ_T0026202.1 MGP_BALBcJ_G0017437.1 mouse_genomes_project 10 78326052 78332348 + MGP_BALBcJ_P0026202 Reep6 protein_coding protein_coding MGP_BALBcJ_T0026203.1 MGP_BALBcJ_G0017437.1 mouse_genomes_project 10 78326105 78330340 + Reep6 protein_coding retained_intron MGP_BALBcJ_T0026204.1 MGP_BALBcJ_G0017437.1 mouse_genomes_project 10 78326109 78331490 + MGP_BALBcJ_P0026204 Reep6 protein_coding protein_coding MGP_BALBcJ_T0024723.1 MGP_BALBcJ_G0017010.1 mouse_genomes_project 10 20196368 20199326 - MGP_BALBcJ_P0024723 Tcf21 protein_coding protein_coding MGP_BALBcJ_T0100468.1 MGP_BALBcJ_G0038504.1 mouse_genomes_project 10 114926250 114926387 + Gm26495 snoRNA snoRNA MGP_BALBcJ_T0100450.1 MGP_BALBcJ_G0038486.1 mouse_genomes_project 10 70256847 70256980 + Gm24984 snoRNA snoRNA MGP_BALBcJ_T0026695.1 MGP_BALBcJ_G0017570.1 mouse_genomes_project 10 86802253 86817832 + MGP_BALBcJ_P0026695 Sycp3 protein_coding protein_coding MGP_BALBcJ_T0026696.1 MGP_BALBcJ_G0017570.1 mouse_genomes_project 10 86802348 86817833 + MGP_BALBcJ_P0026696 Sycp3 protein_coding protein_coding MGP_BALBcJ_T0026697.1 MGP_BALBcJ_G0017570.1 mouse_genomes_project 10 86802348 86817833 + MGP_BALBcJ_P0026697 Sycp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011244.1 MGP_BALBcJ_G0009369.1 mouse_genomes_project 10 10089896 10090133 - Gm27741 misc_RNA misc_RNA MGP_BALBcJ_T0027555.1 MGP_BALBcJ_G0017862.1 mouse_genomes_project 10 128590435 128591571 - MGP_BALBcJ_P0027555 Olfr802 protein_coding protein_coding MGP_BALBcJ_T0027556.1 MGP_BALBcJ_G0017862.1 mouse_genomes_project 10 128590435 128594856 - MGP_BALBcJ_P0027556 Olfr802 protein_coding protein_coding MGP_BALBcJ_T0011260.1 MGP_BALBcJ_G0009385.1 mouse_genomes_project 10 90512570 90512678 - Gm27366 misc_RNA misc_RNA MGP_BALBcJ_T0099220.1 MGP_BALBcJ_G0037256.1 mouse_genomes_project 10 111440047 111440207 + Gm22507 snRNA snRNA MGP_BALBcJ_T0027519.1 MGP_BALBcJ_G0017836.1 mouse_genomes_project 10 127939768 127940707 - MGP_BALBcJ_P0027519 Olfr768 protein_coding protein_coding MGP_BALBcJ_T0006121.1 MGP_BALBcJ_G0005114.1 mouse_genomes_project 10 97753500 97878924 + B530045E10Rik lincRNA lincRNA MGP_BALBcJ_T0006122.1 MGP_BALBcJ_G0005114.1 mouse_genomes_project 10 97876398 97878924 + B530045E10Rik lincRNA lincRNA MGP_BALBcJ_T0026452.1 MGP_BALBcJ_G0017502.1 mouse_genomes_project 10 79526225 79528596 - MGP_BALBcJ_P0026452 S1pr4 protein_coding protein_coding MGP_BALBcJ_T0026267.1 MGP_BALBcJ_G0017453.1 mouse_genomes_project 10 78669864 78680427 - MGP_BALBcJ_P0026267 Mknk2 protein_coding protein_coding MGP_BALBcJ_T0026268.1 MGP_BALBcJ_G0017453.1 mouse_genomes_project 10 78674469 78676844 - MGP_BALBcJ_P0026268 Mknk2 protein_coding protein_coding MGP_BALBcJ_T0026269.1 MGP_BALBcJ_G0017453.1 mouse_genomes_project 10 78676162 78676804 - MGP_BALBcJ_P0026269 Mknk2 protein_coding protein_coding MGP_BALBcJ_T0026270.1 MGP_BALBcJ_G0017453.1 mouse_genomes_project 10 78676498 78682665 - MGP_BALBcJ_P0026270 Mknk2 protein_coding protein_coding MGP_BALBcJ_T0100412.1 MGP_BALBcJ_G0038448.1 mouse_genomes_project 10 1053152 1053284 + Gm25369 snoRNA snoRNA MGP_BALBcJ_T0025380.1 MGP_BALBcJ_G0017234.1 mouse_genomes_project 10 59998633 60040145 - MGP_BALBcJ_P0025380 Hkdc1 protein_coding protein_coding MGP_BALBcJ_T0025381.1 MGP_BALBcJ_G0017234.1 mouse_genomes_project 10 60010722 60015925 - Hkdc1 protein_coding retained_intron MGP_BALBcJ_T0025382.1 MGP_BALBcJ_G0017234.1 mouse_genomes_project 10 60025387 60027403 - Hkdc1 protein_coding retained_intron MGP_BALBcJ_T0025383.1 MGP_BALBcJ_G0017234.1 mouse_genomes_project 10 60034036 60040062 - Hkdc1 protein_coding retained_intron MGP_BALBcJ_T0024941.1 MGP_BALBcJ_G0017100.1 mouse_genomes_project 10 37798908 37822073 - MGP_BALBcJ_P0024941 Rpf2 protein_coding protein_coding MGP_BALBcJ_T0024942.1 MGP_BALBcJ_G0017100.1 mouse_genomes_project 10 37799089 37822107 - MGP_BALBcJ_P0024942 Rpf2 protein_coding protein_coding MGP_BALBcJ_T0024943.1 MGP_BALBcJ_G0017100.1 mouse_genomes_project 10 37799345 37803461 - Rpf2 protein_coding processed_transcript MGP_BALBcJ_T0024944.1 MGP_BALBcJ_G0017100.1 mouse_genomes_project 10 37799475 37822074 - MGP_BALBcJ_P0024944 Rpf2 protein_coding protein_coding MGP_BALBcJ_T0024945.1 MGP_BALBcJ_G0017100.1 mouse_genomes_project 10 37799550 37822098 - MGP_BALBcJ_P0024945 Rpf2 protein_coding protein_coding MGP_BALBcJ_T0024946.1 MGP_BALBcJ_G0017100.1 mouse_genomes_project 10 37801002 37822064 - MGP_BALBcJ_P0024946 Rpf2 protein_coding protein_coding MGP_BALBcJ_T0100472.1 MGP_BALBcJ_G0038508.1 mouse_genomes_project 10 126741231 126741362 - Gm23996 snoRNA snoRNA MGP_BALBcJ_T0009604.1 MGP_BALBcJ_G0007729.1 mouse_genomes_project 10 115125243 115125338 - Gm25190 miRNA miRNA MGP_BALBcJ_T0026393.1 MGP_BALBcJ_G0017492.1 mouse_genomes_project 10 79361225 79366920 - MGP_BALBcJ_P0026393 Gipc3 protein_coding protein_coding MGP_BALBcJ_T0027147.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118095679 118740652 + MGP_BALBcJ_P0027147 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027148.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118095943 118729290 + MGP_BALBcJ_P0027148 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027149.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118095949 118730833 + MGP_BALBcJ_P0027149 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027150.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118339520 118730832 + MGP_BALBcJ_P0027150 Grip1 protein_coding unknown_likely_coding MGP_BALBcJ_T0027151.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462327 118730833 + MGP_BALBcJ_P0027151 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027152.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462336 118730209 + MGP_BALBcJ_P0027152 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027153.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462443 118661156 + Grip1 protein_coding retained_intron MGP_BALBcJ_T0027154.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462450 118729290 + MGP_BALBcJ_P0027154 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027155.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462450 118729290 + MGP_BALBcJ_P0027155 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027156.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462453 118729210 + MGP_BALBcJ_P0027156 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027157.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118462463 118740452 + MGP_BALBcJ_P0027157 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027158.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118493725 118730828 + Grip1 protein_coding retained_intron MGP_BALBcJ_T0027159.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118551383 118729210 + Grip1 protein_coding processed_transcript MGP_BALBcJ_T0027160.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118641809 118740653 + MGP_BALBcJ_P0027160 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027161.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118642011 118730704 + MGP_BALBcJ_P0027161 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027162.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118642159 118729486 + MGP_BALBcJ_P0027162 Grip1 protein_coding protein_coding MGP_BALBcJ_T0027163.1 MGP_BALBcJ_G0017709.1 mouse_genomes_project 10 118642195 118740652 + MGP_BALBcJ_P0027163 Grip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025893.1 MGP_BALBcJ_G0017353.1 mouse_genomes_project 10 75848555 75871330 - MGP_BALBcJ_P0025893 Pfkl protein_coding protein_coding MGP_BALBcJ_T0025894.1 MGP_BALBcJ_G0017353.1 mouse_genomes_project 10 75851985 75853699 - Pfkl protein_coding retained_intron MGP_BALBcJ_T0025895.1 MGP_BALBcJ_G0017353.1 mouse_genomes_project 10 75858811 75861461 - Pfkl protein_coding retained_intron MGP_BALBcJ_T0025896.1 MGP_BALBcJ_G0017353.1 mouse_genomes_project 10 75862206 75871606 - Pfkl protein_coding processed_transcript MGP_BALBcJ_T0026331.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79116699 79136753 + MGP_BALBcJ_P0026331 Map2k2 protein_coding protein_coding MGP_BALBcJ_T0026332.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79116731 79135939 + MGP_BALBcJ_P0026332 Map2k2 protein_coding protein_coding MGP_BALBcJ_T0026333.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79116756 79135901 + MGP_BALBcJ_P0026333 Map2k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026334.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79117129 79131181 + MGP_BALBcJ_P0026334 Map2k2 protein_coding protein_coding MGP_BALBcJ_T0026335.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79130667 79131383 + Map2k2 protein_coding retained_intron MGP_BALBcJ_T0026336.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79132909 79134618 + Map2k2 protein_coding retained_intron MGP_BALBcJ_T0026337.1 MGP_BALBcJ_G0017476.1 mouse_genomes_project 10 79134215 79135983 + Map2k2 protein_coding retained_intron MGP_BALBcJ_T0024806.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26107824 26322275 + MGP_BALBcJ_P0024806 Themis protein_coding protein_coding MGP_BALBcJ_T0024807.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26107824 26227697 + MGP_BALBcJ_P0024807 Themis protein_coding protein_coding MGP_BALBcJ_T0024808.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26107859 26203497 + Themis protein_coding retained_intron MGP_BALBcJ_T0024809.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26107861 26236197 + MGP_BALBcJ_P0024809 Themis protein_coding protein_coding MGP_BALBcJ_T0024810.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26108091 26322278 + MGP_BALBcJ_P0024810 Themis protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024811.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26108097 26219845 + MGP_BALBcJ_P0024811 Themis protein_coding protein_coding MGP_BALBcJ_T0024812.1 MGP_BALBcJ_G0017047.1 mouse_genomes_project 10 26108097 26178843 + MGP_BALBcJ_P0024812 Themis protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006129.1 MGP_BALBcJ_G0005120.1 mouse_genomes_project 10 115262952 115267830 + Gm26579 lincRNA lincRNA MGP_BALBcJ_T0017087.1 MGP_BALBcJ_G0015076.1 mouse_genomes_project 10 85035629 85036606 - Gm15344 processed_transcript processed_transcript MGP_BALBcJ_T0024644.1 MGP_BALBcJ_G0016982.1 mouse_genomes_project 10 16745980 16758620 + MGP_BALBcJ_P0024644 Il22ra2 protein_coding protein_coding MGP_BALBcJ_T0000808.1 MGP_BALBcJ_G0000741.1 mouse_genomes_project 10 25064488 25066245 - TEC TEC MGP_BALBcJ_T0003084.1 MGP_BALBcJ_G0002870.1 mouse_genomes_project 10 119049465 119052689 + 9230105E05Rik antisense antisense MGP_BALBcJ_T0024517.1 MGP_BALBcJ_G0016950.1 mouse_genomes_project 10 8337509 8457572 + MGP_BALBcJ_P0024517 Epm2a protein_coding protein_coding MGP_BALBcJ_T0024518.1 MGP_BALBcJ_G0016950.1 mouse_genomes_project 10 8337558 8446663 + Epm2a protein_coding processed_transcript MGP_BALBcJ_T0100448.1 MGP_BALBcJ_G0038484.1 mouse_genomes_project 10 66854537 66854654 + Gm24172 snoRNA snoRNA MGP_BALBcJ_T0024493.1 MGP_BALBcJ_G0016944.1 mouse_genomes_project 10 7294947 7428953 - MGP_BALBcJ_P0024493 protein_coding protein_coding MGP_BALBcJ_T0024494.1 MGP_BALBcJ_G0016944.1 mouse_genomes_project 10 7294953 7428965 - MGP_BALBcJ_P0024494 protein_coding protein_coding MGP_BALBcJ_T0024495.1 MGP_BALBcJ_G0016944.1 mouse_genomes_project 10 7294953 7373532 - MGP_BALBcJ_P0024495 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024496.1 MGP_BALBcJ_G0016944.1 mouse_genomes_project 10 7295182 7428953 - MGP_BALBcJ_P0024496 protein_coding unknown_likely_coding MGP_BALBcJ_T0024497.1 MGP_BALBcJ_G0016944.1 mouse_genomes_project 10 7360422 7388458 - MGP_BALBcJ_P0024497 protein_coding protein_coding MGP_BALBcJ_T0024498.1 MGP_BALBcJ_G0016944.1 mouse_genomes_project 10 7361080 7428965 - MGP_BALBcJ_P0024498 protein_coding protein_coding MGP_BALBcJ_T0025851.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75423061 75459619 + MGP_BALBcJ_P0025851 Sumo3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025852.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75423073 75433380 + MGP_BALBcJ_P0025852 Sumo3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025853.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75423089 75432977 + MGP_BALBcJ_P0025853 Sumo3 protein_coding protein_coding MGP_BALBcJ_T0025854.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75423089 75433313 + MGP_BALBcJ_P0025854 Sumo3 protein_coding protein_coding MGP_BALBcJ_T0025855.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75423185 75435005 + MGP_BALBcJ_P0025855 Sumo3 protein_coding protein_coding MGP_BALBcJ_T0025856.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75423435 75434092 + MGP_BALBcJ_P0025856 Sumo3 protein_coding protein_coding MGP_BALBcJ_T0025857.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75426506 75433568 + MGP_BALBcJ_P0025857 Sumo3 protein_coding protein_coding MGP_BALBcJ_T0025858.1 MGP_BALBcJ_G0017337.1 mouse_genomes_project 10 75431802 75432730 + Sumo3 protein_coding processed_transcript MGP_BALBcJ_T0027250.1 MGP_BALBcJ_G0017740.1 mouse_genomes_project 10 125792710 125794479 + MGP_BALBcJ_P0027250 Mettl1 protein_coding protein_coding MGP_BALBcJ_T0027251.1 MGP_BALBcJ_G0017740.1 mouse_genomes_project 10 125793228 125798016 + MGP_BALBcJ_P0027251 Mettl1 protein_coding protein_coding MGP_BALBcJ_T0027252.1 MGP_BALBcJ_G0017740.1 mouse_genomes_project 10 125793253 125795299 + Mettl1 protein_coding retained_intron MGP_BALBcJ_T0027253.1 MGP_BALBcJ_G0017740.1 mouse_genomes_project 10 125793254 125796912 + MGP_BALBcJ_P0027253 Mettl1 protein_coding protein_coding MGP_BALBcJ_T0027254.1 MGP_BALBcJ_G0017740.1 mouse_genomes_project 10 125793279 125797550 + MGP_BALBcJ_P0027254 Mettl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025224.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227486 57405598 + MGP_BALBcJ_P0025224 Micu1 protein_coding protein_coding MGP_BALBcJ_T0025225.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227572 57269913 + Micu1 protein_coding retained_intron MGP_BALBcJ_T0025226.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227608 57405596 + MGP_BALBcJ_P0025226 Micu1 protein_coding protein_coding MGP_BALBcJ_T0025227.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227627 57405596 + MGP_BALBcJ_P0025227 Micu1 protein_coding protein_coding MGP_BALBcJ_T0025228.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227637 57405589 + MGP_BALBcJ_P0025228 Micu1 protein_coding protein_coding MGP_BALBcJ_T0025229.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227658 57328685 + MGP_BALBcJ_P0025229 Micu1 protein_coding protein_coding MGP_BALBcJ_T0025230.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57227667 57276740 + Micu1 protein_coding retained_intron MGP_BALBcJ_T0025231.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57265100 57265775 + Micu1 protein_coding processed_transcript MGP_BALBcJ_T0025232.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57265790 57282209 + MGP_BALBcJ_P0025232 Micu1 protein_coding protein_coding MGP_BALBcJ_T0025233.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57287447 57328783 + Micu1 protein_coding processed_transcript MGP_BALBcJ_T0025234.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57373904 57387625 + Micu1 protein_coding retained_intron MGP_BALBcJ_T0025235.1 MGP_BALBcJ_G0017198.1 mouse_genomes_project 10 57402994 57404869 + Micu1 protein_coding retained_intron MGP_BALBcJ_T0003082.1 MGP_BALBcJ_G0002869.1 mouse_genomes_project 10 118468118 118495391 - Grip1os1 antisense antisense MGP_BALBcJ_T0003083.1 MGP_BALBcJ_G0002869.1 mouse_genomes_project 10 118490132 118495278 - Grip1os1 antisense antisense MGP_BALBcJ_T0099163.1 MGP_BALBcJ_G0037199.1 mouse_genomes_project 10 1375583 1375743 + Gm22739 snRNA snRNA MGP_BALBcJ_T0017094.1 MGP_BALBcJ_G0015079.1 mouse_genomes_project 10 119538000 119543697 + Gm15910 processed_transcript processed_transcript MGP_BALBcJ_T0009589.1 MGP_BALBcJ_G0007714.1 mouse_genomes_project 10 85049245 85049378 - Gm25745 miRNA miRNA MGP_BALBcJ_T0026381.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79315640 79343212 + MGP_BALBcJ_P0026381 Pip5k1c protein_coding protein_coding MGP_BALBcJ_T0026382.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79315657 79341494 + MGP_BALBcJ_P0026382 Pip5k1c protein_coding protein_coding MGP_BALBcJ_T0026383.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79315665 79332370 + MGP_BALBcJ_P0026383 Pip5k1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026384.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79315681 79343212 + MGP_BALBcJ_P0026384 Pip5k1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026385.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79315682 79343213 + MGP_BALBcJ_P0026385 Pip5k1c protein_coding protein_coding MGP_BALBcJ_T0026386.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79333927 79336680 + MGP_BALBcJ_P0026386 Pip5k1c protein_coding protein_coding MGP_BALBcJ_T0026387.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79336602 79341385 + MGP_BALBcJ_P0026387 Pip5k1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026388.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79336737 79341260 + MGP_BALBcJ_P0026388 Pip5k1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026389.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79337227 79339022 + Pip5k1c protein_coding retained_intron MGP_BALBcJ_T0026390.1 MGP_BALBcJ_G0017489.1 mouse_genomes_project 10 79340081 79341253 + Pip5k1c protein_coding retained_intron MGP_BALBcJ_T0027513.1 MGP_BALBcJ_G0017830.1 mouse_genomes_project 10 127750582 127775388 + MGP_BALBcJ_P0027513 Itga7 protein_coding protein_coding MGP_BALBcJ_T0026187.1 MGP_BALBcJ_G0017434.1 mouse_genomes_project 10 78291955 78314223 + MGP_BALBcJ_P0026187 Apc2 protein_coding protein_coding MGP_BALBcJ_T0026188.1 MGP_BALBcJ_G0017434.1 mouse_genomes_project 10 78295027 78298302 + MGP_BALBcJ_P0026188 Apc2 protein_coding protein_coding MGP_BALBcJ_T0026189.1 MGP_BALBcJ_G0017434.1 mouse_genomes_project 10 78296783 78299296 + Apc2 protein_coding retained_intron MGP_BALBcJ_T0026190.1 MGP_BALBcJ_G0017434.1 mouse_genomes_project 10 78296970 78298288 + MGP_BALBcJ_P0026190 Apc2 protein_coding protein_coding MGP_BALBcJ_T0026191.1 MGP_BALBcJ_G0017434.1 mouse_genomes_project 10 78296971 78298347 + MGP_BALBcJ_P0026191 Apc2 protein_coding protein_coding MGP_BALBcJ_T0026192.1 MGP_BALBcJ_G0017434.1 mouse_genomes_project 10 78297760 78314216 + MGP_BALBcJ_P0026192 Apc2 protein_coding protein_coding MGP_BALBcJ_T0024740.1 MGP_BALBcJ_G0017022.1 mouse_genomes_project 10 21382616 21414462 + MGP_BALBcJ_P0024740 protein_coding protein_coding MGP_BALBcJ_T0026905.1 MGP_BALBcJ_G0017616.1 mouse_genomes_project 10 94579511 94579823 + MGP_BALBcJ_P0026905 Gm5426 protein_coding protein_coding MGP_BALBcJ_T0025313.1 MGP_BALBcJ_G0017214.1 mouse_genomes_project 10 58784766 58863534 - MGP_BALBcJ_P0025313 Adamts14 protein_coding protein_coding MGP_BALBcJ_T0025314.1 MGP_BALBcJ_G0017214.1 mouse_genomes_project 10 58786108 58863338 - MGP_BALBcJ_P0025314 Adamts14 protein_coding protein_coding MGP_BALBcJ_T0009572.1 MGP_BALBcJ_G0007697.1 mouse_genomes_project 10 76302794 76302898 + Mir6410 miRNA miRNA MGP_BALBcJ_T0025070.1 MGP_BALBcJ_G0017136.1 mouse_genomes_project 10 41517190 41541733 - MGP_BALBcJ_P0025070 Qrsl1 protein_coding protein_coding MGP_BALBcJ_T0025071.1 MGP_BALBcJ_G0017136.1 mouse_genomes_project 10 41517424 41520107 - Qrsl1 protein_coding retained_intron MGP_BALBcJ_T0025072.1 MGP_BALBcJ_G0017136.1 mouse_genomes_project 10 41521216 41541733 - Qrsl1 protein_coding retained_intron MGP_BALBcJ_T0009586.1 MGP_BALBcJ_G0007711.1 mouse_genomes_project 10 79533078 79533175 + Gm25595 miRNA miRNA MGP_BALBcJ_T0098306.1 MGP_BALBcJ_G0036360.1 mouse_genomes_project 10 75688971 75689637 - pseudogene pseudogene MGP_BALBcJ_T0025392.1 MGP_BALBcJ_G0017238.1 mouse_genomes_project 10 60114100 60149414 - MGP_BALBcJ_P0025392 Srgn protein_coding protein_coding MGP_BALBcJ_T0025393.1 MGP_BALBcJ_G0017238.1 mouse_genomes_project 10 60114695 60128876 - MGP_BALBcJ_P0025393 Srgn protein_coding protein_coding MGP_BALBcJ_T0025394.1 MGP_BALBcJ_G0017238.1 mouse_genomes_project 10 60114951 60129059 - MGP_BALBcJ_P0025394 Srgn protein_coding protein_coding MGP_BALBcJ_T0025395.1 MGP_BALBcJ_G0017238.1 mouse_genomes_project 10 60118194 60149388 - MGP_BALBcJ_P0025395 Srgn protein_coding protein_coding MGP_BALBcJ_T0025396.1 MGP_BALBcJ_G0017238.1 mouse_genomes_project 10 60128796 60129218 - MGP_BALBcJ_P0025396 Srgn protein_coding protein_coding MGP_BALBcJ_T0025397.1 MGP_BALBcJ_G0017238.1 mouse_genomes_project 10 60128862 60149388 - Srgn protein_coding processed_transcript MGP_BALBcJ_T0009596.1 MGP_BALBcJ_G0007721.1 mouse_genomes_project 10 93977489 93977580 - Mir3058 miRNA miRNA MGP_BALBcJ_T0009569.1 MGP_BALBcJ_G0007694.1 mouse_genomes_project 10 75459299 75459383 + Mir1930 miRNA miRNA MGP_BALBcJ_T0027102.1 MGP_BALBcJ_G0017692.1 mouse_genomes_project 10 115667394 115749680 - MGP_BALBcJ_P0027102 Frs2 protein_coding protein_coding MGP_BALBcJ_T0027399.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985436 127000654 + MGP_BALBcJ_P0027399 Gls2 protein_coding protein_coding MGP_BALBcJ_T0027400.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985620 126990041 + MGP_BALBcJ_P0027400 Gls2 protein_coding protein_coding MGP_BALBcJ_T0027401.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985702 127000649 + MGP_BALBcJ_P0027401 Gls2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027402.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985705 126990421 + Gls2 protein_coding processed_transcript MGP_BALBcJ_T0027403.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985709 127000719 + MGP_BALBcJ_P0027403 Gls2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027404.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985731 127000649 + MGP_BALBcJ_P0027404 Gls2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027405.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126985789 126990579 + Gls2 protein_coding retained_intron MGP_BALBcJ_T0027406.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126993981 126994908 + Gls2 protein_coding retained_intron MGP_BALBcJ_T0027407.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126994399 126997720 + Gls2 protein_coding processed_transcript MGP_BALBcJ_T0027408.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126994480 127000657 + Gls2 protein_coding retained_intron MGP_BALBcJ_T0027409.1 MGP_BALBcJ_G0017789.1 mouse_genomes_project 10 126997641 127000445 + MGP_BALBcJ_P0027409 Gls2 protein_coding protein_coding MGP_BALBcJ_T0009579.1 MGP_BALBcJ_G0007704.1 mouse_genomes_project 10 78612208 78612278 + Mir6912 miRNA miRNA MGP_BALBcJ_T0026824.1 MGP_BALBcJ_G0017592.1 mouse_genomes_project 10 91831752 91867136 + MGP_BALBcJ_P0026824 Lta4h protein_coding protein_coding MGP_BALBcJ_T0012420.1 MGP_BALBcJ_G0010517.1 mouse_genomes_project 10 119606223 119607010 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098442.1 MGP_BALBcJ_G0036496.1 mouse_genomes_project 10 23796634 23796734 + Gm23757 rRNA rRNA MGP_BALBcJ_T0011265.1 MGP_BALBcJ_G0009390.1 mouse_genomes_project 10 113471980 113472305 - Gm25319 misc_RNA misc_RNA MGP_BALBcJ_T0024619.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15513792 15652800 + MGP_BALBcJ_P0024619 Nhsl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024620.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15532342 15545928 + Nhsl1 protein_coding processed_transcript MGP_BALBcJ_T0024621.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15532379 15640946 + Nhsl1 protein_coding retained_intron MGP_BALBcJ_T0024622.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15532379 15662397 + MGP_BALBcJ_P0024622 Nhsl1 protein_coding protein_coding MGP_BALBcJ_T0024623.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15597811 15601337 + Nhsl1 protein_coding retained_intron MGP_BALBcJ_T0024624.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15597891 15626523 + Nhsl1 protein_coding processed_transcript MGP_BALBcJ_T0024625.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15597904 15654470 + MGP_BALBcJ_P0024625 Nhsl1 protein_coding protein_coding MGP_BALBcJ_T0024626.1 MGP_BALBcJ_G0016974.1 mouse_genomes_project 10 15597904 15662394 + MGP_BALBcJ_P0024626 Nhsl1 protein_coding protein_coding MGP_BALBcJ_T0012411.1 MGP_BALBcJ_G0010508.1 mouse_genomes_project 10 94850943 94851132 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027497.1 MGP_BALBcJ_G0017825.1 mouse_genomes_project 10 127639451 127694038 + MGP_BALBcJ_P0027497 Sarnp protein_coding protein_coding MGP_BALBcJ_T0025098.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46865815 47575733 - MGP_BALBcJ_P0025098 Grik2 protein_coding protein_coding MGP_BALBcJ_T0025099.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46866198 47019091 - Grik2 protein_coding retained_intron MGP_BALBcJ_T0025100.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46866198 47570254 - MGP_BALBcJ_P0025100 Grik2 protein_coding protein_coding MGP_BALBcJ_T0025101.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46867082 47570254 - MGP_BALBcJ_P0025101 Grik2 protein_coding protein_coding MGP_BALBcJ_T0025102.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46867344 47570404 - MGP_BALBcJ_P0025102 Grik2 protein_coding protein_coding MGP_BALBcJ_T0025103.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46867487 46870291 - Grik2 protein_coding retained_intron MGP_BALBcJ_T0025104.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 46871382 47570254 - MGP_BALBcJ_P0025104 Grik2 protein_coding protein_coding MGP_BALBcJ_T0025105.1 MGP_BALBcJ_G0017148.1 mouse_genomes_project 10 47276866 47575721 - MGP_BALBcJ_P0025105 Grik2 protein_coding protein_coding MGP_BALBcJ_T0027205.1 MGP_BALBcJ_G0017726.1 mouse_genomes_project 10 120500171 120772589 - MGP_BALBcJ_P0027205 Srgap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0027206.1 MGP_BALBcJ_G0017726.1 mouse_genomes_project 10 120500261 120772711 - MGP_BALBcJ_P0027206 Srgap1 protein_coding protein_coding MGP_BALBcJ_T0027207.1 MGP_BALBcJ_G0017726.1 mouse_genomes_project 10 120500261 120772704 - MGP_BALBcJ_P0027207 Srgap1 protein_coding protein_coding MGP_BALBcJ_T0027208.1 MGP_BALBcJ_G0017726.1 mouse_genomes_project 10 120504543 120527290 - Srgap1 protein_coding processed_transcript MGP_BALBcJ_T0027209.1 MGP_BALBcJ_G0017726.1 mouse_genomes_project 10 120526824 120543193 - MGP_BALBcJ_P0027209 Srgap1 protein_coding protein_coding MGP_BALBcJ_T0027210.1 MGP_BALBcJ_G0017726.1 mouse_genomes_project 10 120616482 120772711 - Srgap1 protein_coding retained_intron MGP_BALBcJ_T0025411.1 MGP_BALBcJ_G0017243.1 mouse_genomes_project 10 60377879 60427868 - MGP_BALBcJ_P0025411 Ccar1 protein_coding protein_coding MGP_BALBcJ_T0026746.1 MGP_BALBcJ_G0017581.1 mouse_genomes_project 10 88064586 88084231 - MGP_BALBcJ_P0026746 Actr6 protein_coding protein_coding MGP_BALBcJ_T0099192.1 MGP_BALBcJ_G0037228.1 mouse_genomes_project 10 55866361 55866468 - Gm23058 snRNA snRNA MGP_BALBcJ_T0027053.1 MGP_BALBcJ_G0017676.1 mouse_genomes_project 10 113940136 113955051 - MGP_BALBcJ_P0027053 Thap2 protein_coding protein_coding MGP_BALBcJ_T0003014.1 MGP_BALBcJ_G0002819.1 mouse_genomes_project 10 42984212 42986200 - Gm15934 antisense antisense MGP_BALBcJ_T0025763.1 MGP_BALBcJ_G0017316.1 mouse_genomes_project 10 74047384 74054680 + MGP_BALBcJ_P0025763 S100b protein_coding protein_coding MGP_BALBcJ_T0100474.1 MGP_BALBcJ_G0038510.1 mouse_genomes_project 10 126872627 126872699 + Mir677 snoRNA snoRNA MGP_BALBcJ_T0027515.1 MGP_BALBcJ_G0017832.1 mouse_genomes_project 10 127807524 127811842 + MGP_BALBcJ_P0027515 Olfr763 protein_coding protein_coding MGP_BALBcJ_T0026921.1 MGP_BALBcJ_G0017627.1 mouse_genomes_project 10 97544276 97549365 + MGP_BALBcJ_P0026921 Galnt4 protein_coding protein_coding MGP_BALBcJ_T0027167.1 MGP_BALBcJ_G0017711.1 mouse_genomes_project 10 118795312 118854679 - MGP_BALBcJ_P0027167 Irak3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027168.1 MGP_BALBcJ_G0017711.1 mouse_genomes_project 10 118795864 118854640 - MGP_BALBcJ_P0027168 Irak3 protein_coding protein_coding MGP_BALBcJ_T0027169.1 MGP_BALBcJ_G0017711.1 mouse_genomes_project 10 118813089 118823134 - Irak3 protein_coding processed_transcript MGP_BALBcJ_T0027170.1 MGP_BALBcJ_G0017711.1 mouse_genomes_project 10 118817800 118854768 - Irak3 protein_coding retained_intron MGP_BALBcJ_T0027278.1 MGP_BALBcJ_G0017750.1 mouse_genomes_project 10 125946182 125951801 - MGP_BALBcJ_P0027278 Dtx3 protein_coding protein_coding MGP_BALBcJ_T0027279.1 MGP_BALBcJ_G0017750.1 mouse_genomes_project 10 125946182 125951801 - MGP_BALBcJ_P0027279 Dtx3 protein_coding protein_coding MGP_BALBcJ_T0027280.1 MGP_BALBcJ_G0017750.1 mouse_genomes_project 10 125946446 125951819 - MGP_BALBcJ_P0027280 Dtx3 protein_coding protein_coding MGP_BALBcJ_T0027281.1 MGP_BALBcJ_G0017750.1 mouse_genomes_project 10 125946629 125950558 - MGP_BALBcJ_P0027281 Dtx3 protein_coding protein_coding MGP_BALBcJ_T0027282.1 MGP_BALBcJ_G0017750.1 mouse_genomes_project 10 125948812 125951820 - MGP_BALBcJ_P0027282 Dtx3 protein_coding protein_coding MGP_BALBcJ_T0027283.1 MGP_BALBcJ_G0017750.1 mouse_genomes_project 10 125949341 125951811 - Dtx3 protein_coding retained_intron MGP_BALBcJ_T0025335.1 MGP_BALBcJ_G0017226.1 mouse_genomes_project 10 59344456 59389612 - MGP_BALBcJ_P0025335 H2afy2 protein_coding protein_coding MGP_BALBcJ_T0003001.1 MGP_BALBcJ_G0002810.1 mouse_genomes_project 10 31043154 31075448 + Gm15939 antisense antisense MGP_BALBcJ_T0026428.1 MGP_BALBcJ_G0017498.1 mouse_genomes_project 10 79417248 79419052 + MGP_BALBcJ_P0026428 Smim24 protein_coding protein_coding MGP_BALBcJ_T0026429.1 MGP_BALBcJ_G0017498.1 mouse_genomes_project 10 79417809 79419297 + Smim24 protein_coding processed_transcript MGP_BALBcJ_T0006042.1 MGP_BALBcJ_G0005061.1 mouse_genomes_project 10 5811240 5814771 + Gm26674 lincRNA lincRNA MGP_BALBcJ_T0025091.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43275667 43402972 + MGP_BALBcJ_P0025091 Hace1 protein_coding protein_coding MGP_BALBcJ_T0025092.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43275979 43302278 + MGP_BALBcJ_P0025092 Hace1 protein_coding protein_coding MGP_BALBcJ_T0025093.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43276169 43302232 + Hace1 protein_coding processed_transcript MGP_BALBcJ_T0025094.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43283987 43343400 + Hace1 protein_coding processed_transcript MGP_BALBcJ_T0025095.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43368644 43402786 + MGP_BALBcJ_P0025095 Hace1 protein_coding protein_coding MGP_BALBcJ_T0025096.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43369688 43402786 + MGP_BALBcJ_P0025096 Hace1 protein_coding protein_coding MGP_BALBcJ_T0025097.1 MGP_BALBcJ_G0017147.1 mouse_genomes_project 10 43374247 43402898 + Hace1 protein_coding retained_intron MGP_BALBcJ_T0027072.1 MGP_BALBcJ_G0017682.1 mouse_genomes_project 10 114700131 114702385 - MGP_BALBcJ_P0027072 4933416C03Rik protein_coding protein_coding MGP_BALBcJ_T0027079.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115079021 115174482 - MGP_BALBcJ_P0027079 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027080.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115079025 115174467 - MGP_BALBcJ_P0027080 Cnot2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027081.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115079025 115142452 - MGP_BALBcJ_P0027081 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027082.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115079026 115174471 - MGP_BALBcJ_P0027082 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027083.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115079647 115174482 - MGP_BALBcJ_P0027083 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027084.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115080057 115174473 - MGP_BALBcJ_P0027084 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027085.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115080060 115130536 - MGP_BALBcJ_P0027085 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027086.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115092016 115174454 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0027087.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115092266 115174464 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0027088.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115093297 115174461 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0027089.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115093302 115174456 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0027090.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115097806 115174436 - MGP_BALBcJ_P0027090 Cnot2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027091.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115100147 115174462 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0027092.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115103557 115174467 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0027093.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115103557 115174482 - MGP_BALBcJ_P0027093 Cnot2 protein_coding protein_coding MGP_BALBcJ_T0027094.1 MGP_BALBcJ_G0017685.1 mouse_genomes_project 10 115103926 115174454 - Cnot2 protein_coding processed_transcript MGP_BALBcJ_T0012377.1 MGP_BALBcJ_G0010474.1 mouse_genomes_project 10 29077046 29078349 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025667.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72793427 72805414 + Rab36 protein_coding retained_intron MGP_BALBcJ_T0025668.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72793435 72811374 + MGP_BALBcJ_P0025668 Rab36 protein_coding protein_coding MGP_BALBcJ_T0025669.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72793453 72810729 + MGP_BALBcJ_P0025669 Rab36 protein_coding protein_coding MGP_BALBcJ_T0025670.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72793595 72804198 + Rab36 protein_coding retained_intron MGP_BALBcJ_T0025671.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72793642 72802720 + Rab36 protein_coding retained_intron MGP_BALBcJ_T0025672.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72793691 72807321 + MGP_BALBcJ_P0025672 Rab36 protein_coding protein_coding MGP_BALBcJ_T0025673.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72794205 72810687 + MGP_BALBcJ_P0025673 Rab36 protein_coding protein_coding MGP_BALBcJ_T0025674.1 MGP_BALBcJ_G0017287.1 mouse_genomes_project 10 72794592 72807316 + Rab36 protein_coding retained_intron MGP_BALBcJ_T0024739.1 MGP_BALBcJ_G0017021.1 mouse_genomes_project 10 21363363 21364401 - MGP_BALBcJ_P0024739 Taar6 protein_coding protein_coding MGP_BALBcJ_T0025025.1 MGP_BALBcJ_G0017123.1 mouse_genomes_project 10 39924577 40095517 - MGP_BALBcJ_P0025025 Lace1 protein_coding protein_coding MGP_BALBcJ_T0025026.1 MGP_BALBcJ_G0017123.1 mouse_genomes_project 10 39924585 40095531 - MGP_BALBcJ_P0025026 Lace1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025027.1 MGP_BALBcJ_G0017123.1 mouse_genomes_project 10 39925579 40031694 - MGP_BALBcJ_P0025027 Lace1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025822.1 MGP_BALBcJ_G0017332.1 mouse_genomes_project 10 75066058 75076345 + MGP_BALBcJ_P0025822 Pofut2 protein_coding protein_coding MGP_BALBcJ_T0026914.1 MGP_BALBcJ_G0017623.1 mouse_genomes_project 10 96158139 96160007 + MGP_BALBcJ_P0026914 Ccer1 protein_coding protein_coding MGP_BALBcJ_T0025678.1 MGP_BALBcJ_G0017290.1 mouse_genomes_project 10 73077733 73095564 + MGP_BALBcJ_P0025678 Adora2a protein_coding protein_coding MGP_BALBcJ_T0026081.1 MGP_BALBcJ_G0017414.1 mouse_genomes_project 10 77953994 77960470 + MGP_BALBcJ_P0026081 Grin3b protein_coding protein_coding MGP_BALBcJ_T0026082.1 MGP_BALBcJ_G0017414.1 mouse_genomes_project 10 77957016 77959995 + MGP_BALBcJ_P0026082 Grin3b protein_coding protein_coding MGP_BALBcJ_T0026083.1 MGP_BALBcJ_G0017414.1 mouse_genomes_project 10 77957688 77960404 + MGP_BALBcJ_P0026083 Grin3b protein_coding protein_coding MGP_BALBcJ_T0017057.1 MGP_BALBcJ_G0015069.1 mouse_genomes_project 10 21966486 21967385 - Gm15270 processed_transcript processed_transcript MGP_BALBcJ_T0017058.1 MGP_BALBcJ_G0015069.1 mouse_genomes_project 10 21966492 22011794 - Gm15270 processed_transcript processed_transcript MGP_BALBcJ_T0017059.1 MGP_BALBcJ_G0015069.1 mouse_genomes_project 10 21996124 22009710 - Gm15270 processed_transcript processed_transcript MGP_BALBcJ_T0017060.1 MGP_BALBcJ_G0015069.1 mouse_genomes_project 10 22011223 22013087 - Gm15270 processed_transcript processed_transcript MGP_BALBcJ_T0006117.1 MGP_BALBcJ_G0005111.1 mouse_genomes_project 10 93070049 93084235 - Cep83os lincRNA lincRNA MGP_BALBcJ_T0025734.1 MGP_BALBcJ_G0017304.1 mouse_genomes_project 10 73609317 73612354 - MGP_BALBcJ_P0025734 Gstt2 protein_coding protein_coding MGP_BALBcJ_T0027370.1 MGP_BALBcJ_G0017779.1 mouse_genomes_project 10 126649988 126659515 + MGP_BALBcJ_P0027370 BC089597 protein_coding protein_coding MGP_BALBcJ_T0025691.1 MGP_BALBcJ_G0017293.1 mouse_genomes_project 10 73290247 73310085 + MGP_BALBcJ_P0025691 Snrpd3 protein_coding protein_coding MGP_BALBcJ_T0025692.1 MGP_BALBcJ_G0017293.1 mouse_genomes_project 10 73290710 73292563 + Snrpd3 protein_coding retained_intron MGP_BALBcJ_T0009618.1 MGP_BALBcJ_G0007743.1 mouse_genomes_project 10 127198201 127198270 + Mir6915 miRNA miRNA MGP_BALBcJ_T0027099.1 MGP_BALBcJ_G0017689.1 mouse_genomes_project 10 115580306 115619126 + MGP_BALBcJ_P0027099 Best3 protein_coding protein_coding MGP_BALBcJ_T0012405.1 MGP_BALBcJ_G0010502.1 mouse_genomes_project 10 77870243 77870493 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026937.1 MGP_BALBcJ_G0017634.1 mouse_genomes_project 10 98946712 99028216 + MGP_BALBcJ_P0026937 Cep290 protein_coding unknown_likely_coding MGP_BALBcJ_T0026938.1 MGP_BALBcJ_G0017634.1 mouse_genomes_project 10 98947382 99029552 + MGP_BALBcJ_P0026938 Cep290 protein_coding protein_coding MGP_BALBcJ_T0026961.1 MGP_BALBcJ_G0017638.1 mouse_genomes_project 10 100973997 100982218 - MGP_BALBcJ_P0026961 Nts protein_coding protein_coding MGP_BALBcJ_T0026986.1 MGP_BALBcJ_G0017647.1 mouse_genomes_project 10 105403609 105598303 - MGP_BALBcJ_P0026986 Acss3 protein_coding protein_coding MGP_BALBcJ_T0026987.1 MGP_BALBcJ_G0017647.1 mouse_genomes_project 10 105434165 105598303 - MGP_BALBcJ_P0026987 Acss3 protein_coding protein_coding MGP_BALBcJ_T0026988.1 MGP_BALBcJ_G0017647.1 mouse_genomes_project 10 105580347 105598284 - Acss3 protein_coding processed_transcript MGP_BALBcJ_T0026062.1 MGP_BALBcJ_G0017406.1 mouse_genomes_project 10 77867844 77869748 + MGP_BALBcJ_P0026062 Elane protein_coding protein_coding MGP_BALBcJ_T0027483.1 MGP_BALBcJ_G0017815.1 mouse_genomes_project 10 127485502 127489534 - MGP_BALBcJ_P0027483 Suox protein_coding protein_coding MGP_BALBcJ_T0026636.1 MGP_BALBcJ_G0017554.1 mouse_genomes_project 10 85033709 85045899 - Hsp90b1 protein_coding retained_intron MGP_BALBcJ_T0026637.1 MGP_BALBcJ_G0017554.1 mouse_genomes_project 10 85034349 85049439 - MGP_BALBcJ_P0026637 Hsp90b1 protein_coding protein_coding MGP_BALBcJ_T0026638.1 MGP_BALBcJ_G0017554.1 mouse_genomes_project 10 85035911 85042369 - MGP_BALBcJ_P0026638 Hsp90b1 protein_coding protein_coding MGP_BALBcJ_T0026639.1 MGP_BALBcJ_G0017554.1 mouse_genomes_project 10 85037531 85039232 - Hsp90b1 protein_coding retained_intron MGP_BALBcJ_T0026640.1 MGP_BALBcJ_G0017554.1 mouse_genomes_project 10 85045876 85047023 - Hsp90b1 protein_coding retained_intron MGP_BALBcJ_T0025959.1 MGP_BALBcJ_G0017376.1 mouse_genomes_project 10 76850508 76854180 + MGP_BALBcJ_P0025959 Olfr1352 protein_coding protein_coding MGP_BALBcJ_T0025960.1 MGP_BALBcJ_G0017376.1 mouse_genomes_project 10 76850573 76853717 + MGP_BALBcJ_P0025960 Olfr1352 protein_coding protein_coding MGP_BALBcJ_T0003030.1 MGP_BALBcJ_G0002832.1 mouse_genomes_project 10 73867297 73869091 + Gm16222 antisense antisense MGP_BALBcJ_T0024681.1 MGP_BALBcJ_G0016993.1 mouse_genomes_project 10 18074642 18207580 + MGP_BALBcJ_P0024681 Ahi1 protein_coding protein_coding MGP_BALBcJ_T0024682.1 MGP_BALBcJ_G0016993.1 mouse_genomes_project 10 18167297 18207580 + MGP_BALBcJ_P0024682 Ahi1 protein_coding protein_coding MGP_BALBcJ_T0009603.1 MGP_BALBcJ_G0007728.1 mouse_genomes_project 10 107808214 107808297 - Gm44495 miRNA miRNA MGP_BALBcJ_T0027542.1 MGP_BALBcJ_G0017852.1 mouse_genomes_project 10 128366185 128367121 + MGP_BALBcJ_P0027542 Olfr788 protein_coding protein_coding MGP_BALBcJ_T0002998.1 MGP_BALBcJ_G0002807.1 mouse_genomes_project 10 19172451 19176574 + antisense antisense MGP_BALBcJ_T0009566.1 MGP_BALBcJ_G0007691.1 mouse_genomes_project 10 60309656 60309707 + Mir7215 miRNA miRNA MGP_BALBcJ_T0025528.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256880 67602051 + protein_coding retained_intron MGP_BALBcJ_T0025529.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256880 67444726 + protein_coding processed_transcript MGP_BALBcJ_T0025530.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256880 67762247 + MGP_BALBcJ_P0025530 protein_coding protein_coding MGP_BALBcJ_T0025531.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256923 67579037 + protein_coding retained_intron MGP_BALBcJ_T0025532.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256951 67759646 + MGP_BALBcJ_P0025532 protein_coding protein_coding MGP_BALBcJ_T0025533.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256955 67759902 + MGP_BALBcJ_P0025533 protein_coding protein_coding MGP_BALBcJ_T0025534.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67256955 67759902 + MGP_BALBcJ_P0025534 protein_coding protein_coding MGP_BALBcJ_T0025535.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257173 67551764 + MGP_BALBcJ_P0025535 protein_coding protein_coding MGP_BALBcJ_T0025536.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257316 67758886 + MGP_BALBcJ_P0025536 protein_coding protein_coding MGP_BALBcJ_T0025537.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257330 67750664 + MGP_BALBcJ_P0025537 protein_coding protein_coding MGP_BALBcJ_T0025538.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257330 67750664 + MGP_BALBcJ_P0025538 protein_coding protein_coding MGP_BALBcJ_T0025539.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257330 67750664 + MGP_BALBcJ_P0025539 protein_coding protein_coding MGP_BALBcJ_T0025540.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257330 67750664 + MGP_BALBcJ_P0025540 protein_coding protein_coding MGP_BALBcJ_T0025541.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67257330 67750664 + MGP_BALBcJ_P0025541 protein_coding protein_coding MGP_BALBcJ_T0025542.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67429969 67434150 + protein_coding retained_intron MGP_BALBcJ_T0025543.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67430043 67750662 + MGP_BALBcJ_P0025543 protein_coding protein_coding MGP_BALBcJ_T0025544.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67430147 67729126 + protein_coding retained_intron MGP_BALBcJ_T0025545.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67430151 67549318 + protein_coding retained_intron MGP_BALBcJ_T0025546.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67512191 67537079 + protein_coding retained_intron MGP_BALBcJ_T0025547.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67512202 67587374 + MGP_BALBcJ_P0025547 protein_coding protein_coding MGP_BALBcJ_T0025548.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67514129 67578458 + MGP_BALBcJ_P0025548 protein_coding protein_coding MGP_BALBcJ_T0025549.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67628252 67758941 + MGP_BALBcJ_P0025549 protein_coding protein_coding MGP_BALBcJ_T0025550.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67629190 67706376 + MGP_BALBcJ_P0025550 protein_coding protein_coding MGP_BALBcJ_T0025551.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67645264 67686164 + protein_coding retained_intron MGP_BALBcJ_T0025552.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656454 67657298 + protein_coding retained_intron MGP_BALBcJ_T0025553.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656454 67758977 + MGP_BALBcJ_P0025553 protein_coding protein_coding MGP_BALBcJ_T0025554.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656491 67759974 + MGP_BALBcJ_P0025554 protein_coding protein_coding MGP_BALBcJ_T0025555.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656732 67759902 + MGP_BALBcJ_P0025555 protein_coding protein_coding MGP_BALBcJ_T0025556.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656732 67759902 + MGP_BALBcJ_P0025556 protein_coding protein_coding MGP_BALBcJ_T0025557.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656732 67759902 + MGP_BALBcJ_P0025557 protein_coding protein_coding MGP_BALBcJ_T0025558.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656764 67750836 + MGP_BALBcJ_P0025558 protein_coding protein_coding MGP_BALBcJ_T0025559.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656778 67728396 + protein_coding retained_intron MGP_BALBcJ_T0025560.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67656913 67759663 + MGP_BALBcJ_P0025560 protein_coding protein_coding MGP_BALBcJ_T0025561.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67657039 67759646 + MGP_BALBcJ_P0025561 protein_coding protein_coding MGP_BALBcJ_T0025562.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67657092 67759015 + MGP_BALBcJ_P0025562 protein_coding protein_coding MGP_BALBcJ_T0025563.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67706287 67716186 + protein_coding retained_intron MGP_BALBcJ_T0025564.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67712354 67733323 + MGP_BALBcJ_P0025564 protein_coding protein_coding MGP_BALBcJ_T0025565.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67713245 67719996 + MGP_BALBcJ_P0025565 protein_coding protein_coding MGP_BALBcJ_T0025566.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67714206 67759902 + MGP_BALBcJ_P0025566 protein_coding protein_coding MGP_BALBcJ_T0025567.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67716007 67733528 + protein_coding retained_intron MGP_BALBcJ_T0025568.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67721734 67759648 + MGP_BALBcJ_P0025568 protein_coding protein_coding MGP_BALBcJ_T0025569.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67723820 67759467 + MGP_BALBcJ_P0025569 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025570.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67725976 67731993 + MGP_BALBcJ_P0025570 protein_coding protein_coding MGP_BALBcJ_T0025571.1 MGP_BALBcJ_G0017272.1 mouse_genomes_project 10 67728188 67738549 + protein_coding retained_intron MGP_BALBcJ_T0026300.1 MGP_BALBcJ_G0017466.1 mouse_genomes_project 10 78888421 78908105 + MGP_BALBcJ_P0026300 Tmprss9 protein_coding protein_coding MGP_BALBcJ_T0025925.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76137039 76220582 - MGP_BALBcJ_P0025925 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025926.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76139424 76220005 - MGP_BALBcJ_P0025926 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025927.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76139424 76166064 - MGP_BALBcJ_P0025927 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025928.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76139424 76220193 - MGP_BALBcJ_P0025928 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025929.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76139424 76219840 - MGP_BALBcJ_P0025929 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025930.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76141472 76163260 - MGP_BALBcJ_P0025930 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025931.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76141475 76146302 - Agpat3 protein_coding retained_intron MGP_BALBcJ_T0025932.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76152132 76188488 - MGP_BALBcJ_P0025932 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025933.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76152178 76175416 - MGP_BALBcJ_P0025933 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025934.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76155720 76220629 - MGP_BALBcJ_P0025934 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0025935.1 MGP_BALBcJ_G0017360.1 mouse_genomes_project 10 76155731 76220352 - MGP_BALBcJ_P0025935 Agpat3 protein_coding protein_coding MGP_BALBcJ_T0026122.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78115806 78122743 - MGP_BALBcJ_P0026122 Cbarp protein_coding protein_coding MGP_BALBcJ_T0026123.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78115806 78122743 - MGP_BALBcJ_P0026123 Cbarp protein_coding protein_coding MGP_BALBcJ_T0026124.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78115906 78124664 - MGP_BALBcJ_P0026124 Cbarp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026125.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78115906 78124664 - MGP_BALBcJ_P0026125 Cbarp protein_coding protein_coding MGP_BALBcJ_T0026126.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78117891 78120037 - Cbarp protein_coding retained_intron MGP_BALBcJ_T0026127.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78118429 78120944 - Cbarp protein_coding retained_intron MGP_BALBcJ_T0026128.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78120473 78124662 - MGP_BALBcJ_P0026128 Cbarp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026129.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78120513 78124477 - MGP_BALBcJ_P0026129 Cbarp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026130.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78120871 78123272 - Cbarp protein_coding processed_transcript MGP_BALBcJ_T0026131.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78122000 78123259 - Cbarp protein_coding processed_transcript MGP_BALBcJ_T0026132.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78122018 78122708 - Cbarp protein_coding processed_transcript MGP_BALBcJ_T0026133.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78122063 78123009 - Cbarp protein_coding retained_intron MGP_BALBcJ_T0026134.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78122229 78122950 - Cbarp protein_coding retained_intron MGP_BALBcJ_T0026135.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78122702 78123915 - Cbarp protein_coding processed_transcript MGP_BALBcJ_T0026136.1 MGP_BALBcJ_G0017423.1 mouse_genomes_project 10 78122702 78126135 - MGP_BALBcJ_P0026136 Cbarp protein_coding protein_coding MGP_BALBcJ_T0026520.1 MGP_BALBcJ_G0017518.1 mouse_genomes_project 10 80604886 80610967 - MGP_BALBcJ_P0026520 Gm1553 protein_coding protein_coding MGP_BALBcJ_T0099191.1 MGP_BALBcJ_G0037227.1 mouse_genomes_project 10 54969740 54969840 + Gm24285 snRNA snRNA MGP_BALBcJ_T0024853.1 MGP_BALBcJ_G0017066.1 mouse_genomes_project 10 30936289 31043678 - MGP_BALBcJ_P0024853 Clvs2 protein_coding protein_coding MGP_BALBcJ_T0024854.1 MGP_BALBcJ_G0017066.1 mouse_genomes_project 10 30963825 31043105 - Clvs2 protein_coding processed_transcript MGP_BALBcJ_T0024855.1 MGP_BALBcJ_G0017066.1 mouse_genomes_project 10 31007442 31043528 - Clvs2 protein_coding processed_transcript MGP_BALBcJ_T0024856.1 MGP_BALBcJ_G0017066.1 mouse_genomes_project 10 31011786 31043531 - MGP_BALBcJ_P0024856 Clvs2 protein_coding protein_coding MGP_BALBcJ_T0009616.1 MGP_BALBcJ_G0007741.1 mouse_genomes_project 10 127187154 127187223 - Gm26308 miRNA miRNA MGP_BALBcJ_T0012402.1 MGP_BALBcJ_G0010499.1 mouse_genomes_project 10 73392308 73392732 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026547.1 MGP_BALBcJ_G0017524.1 mouse_genomes_project 10 81065301 81104889 + MGP_BALBcJ_P0026547 protein_coding protein_coding MGP_BALBcJ_T0026578.1 MGP_BALBcJ_G0017532.1 mouse_genomes_project 10 81938604 81980392 + MGP_BALBcJ_P0026578 1500009L16Rik protein_coding protein_coding MGP_BALBcJ_T0026216.1 MGP_BALBcJ_G0017440.1 mouse_genomes_project 10 78379690 78387133 - MGP_BALBcJ_P0026216 Mex3d protein_coding protein_coding MGP_BALBcJ_T0026217.1 MGP_BALBcJ_G0017440.1 mouse_genomes_project 10 78379692 78387125 - MGP_BALBcJ_P0026217 Mex3d protein_coding protein_coding MGP_BALBcJ_T0026218.1 MGP_BALBcJ_G0017440.1 mouse_genomes_project 10 78379789 78381323 - MGP_BALBcJ_P0026218 Mex3d protein_coding protein_coding MGP_BALBcJ_T0025345.1 MGP_BALBcJ_G0017228.1 mouse_genomes_project 10 59678987 59680601 + MGP_BALBcJ_P0025345 protein_coding protein_coding MGP_BALBcJ_T0027592.1 MGP_BALBcJ_G0017890.1 mouse_genomes_project 10 129463334 129480869 - MGP_BALBcJ_P0027592 protein_coding protein_coding MGP_BALBcJ_T0026490.1 MGP_BALBcJ_G0017508.1 mouse_genomes_project 10 79638374 79656010 + BC025920 protein_coding processed_transcript MGP_BALBcJ_T0026491.1 MGP_BALBcJ_G0017508.1 mouse_genomes_project 10 79638407 79641939 + MGP_BALBcJ_P0026491 BC025920 protein_coding protein_coding MGP_BALBcJ_T0026492.1 MGP_BALBcJ_G0017508.1 mouse_genomes_project 10 79638987 79641648 + MGP_BALBcJ_P0026492 BC025920 protein_coding protein_coding MGP_BALBcJ_T0026493.1 MGP_BALBcJ_G0017508.1 mouse_genomes_project 10 79638987 79641648 + MGP_BALBcJ_P0026493 BC025920 protein_coding protein_coding MGP_BALBcJ_T0026494.1 MGP_BALBcJ_G0017508.1 mouse_genomes_project 10 79639129 79641912 + MGP_BALBcJ_P0026494 BC025920 protein_coding protein_coding MGP_BALBcJ_T0027038.1 MGP_BALBcJ_G0017666.1 mouse_genomes_project 10 110566589 110590723 + MGP_BALBcJ_P0027038 Glipr1l1 protein_coding protein_coding MGP_BALBcJ_T0011266.1 MGP_BALBcJ_G0009391.1 mouse_genomes_project 10 113824087 113824393 - Gm22794 misc_RNA misc_RNA MGP_BALBcJ_T0009622.1 MGP_BALBcJ_G0007747.1 mouse_genomes_project 10 127373347 127373466 - miRNA miRNA MGP_BALBcJ_T0009599.1 MGP_BALBcJ_G0007724.1 mouse_genomes_project 10 100228661 100228742 + Mir3059 miRNA miRNA MGP_BALBcJ_T0017081.1 MGP_BALBcJ_G0015074.1 mouse_genomes_project 10 67945796 67957392 + Mrln processed_transcript lincRNA MGP_BALBcJ_T0017082.1 MGP_BALBcJ_G0015074.1 mouse_genomes_project 10 67945799 67961818 + Mrln processed_transcript lincRNA MGP_BALBcJ_T0017083.1 MGP_BALBcJ_G0015074.1 mouse_genomes_project 10 67945842 67961687 + Mrln processed_transcript lincRNA MGP_BALBcJ_T0017084.1 MGP_BALBcJ_G0015074.1 mouse_genomes_project 10 67945857 67953230 + Mrln processed_transcript lincRNA MGP_BALBcJ_T0017085.1 MGP_BALBcJ_G0015074.1 mouse_genomes_project 10 67959003 67961817 + Mrln processed_transcript retained_intron MGP_BALBcJ_T0025743.1 MGP_BALBcJ_G0017308.1 mouse_genomes_project 10 73704649 73705421 - MGP_BALBcJ_P0025743 Mmp11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0025744.1 MGP_BALBcJ_G0017308.1 mouse_genomes_project 10 73704649 73713903 - MGP_BALBcJ_P0025744 Mmp11 protein_coding protein_coding MGP_BALBcJ_T0025745.1 MGP_BALBcJ_G0017308.1 mouse_genomes_project 10 73704649 73713930 - MGP_BALBcJ_P0025745 Mmp11 protein_coding protein_coding MGP_BALBcJ_T0025746.1 MGP_BALBcJ_G0017308.1 mouse_genomes_project 10 73704650 73707840 - MGP_BALBcJ_P0025746 Mmp11 protein_coding protein_coding MGP_BALBcJ_T0025747.1 MGP_BALBcJ_G0017308.1 mouse_genomes_project 10 73708187 73709118 - Mmp11 protein_coding retained_intron MGP_BALBcJ_T0026409.1 MGP_BALBcJ_G0017495.1 mouse_genomes_project 10 79386719 79388507 - MGP_BALBcJ_P0026409 4930404N11Rik protein_coding protein_coding MGP_BALBcJ_T0026410.1 MGP_BALBcJ_G0017495.1 mouse_genomes_project 10 79387575 79388529 - 4930404N11Rik protein_coding retained_intron MGP_BALBcJ_T0026411.1 MGP_BALBcJ_G0017495.1 mouse_genomes_project 10 79387676 79389469 - MGP_BALBcJ_P0026411 4930404N11Rik protein_coding protein_coding MGP_BALBcJ_T0026412.1 MGP_BALBcJ_G0017495.1 mouse_genomes_project 10 79387699 79389443 - 4930404N11Rik protein_coding retained_intron MGP_BALBcJ_T0025321.1 MGP_BALBcJ_G0017221.1 mouse_genomes_project 10 59199146 59232841 + MGP_BALBcJ_P0025321 Npffr1 protein_coding protein_coding MGP_BALBcJ_T0027121.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116306889 116332248 - MGP_BALBcJ_P0027121 Mdm2 protein_coding protein_coding MGP_BALBcJ_T0027122.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116306889 116332248 - MGP_BALBcJ_P0027122 Mdm2 protein_coding protein_coding MGP_BALBcJ_T0027123.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116306896 116331512 - MGP_BALBcJ_P0027123 Mdm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027124.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116308096 116332175 - Mdm2 protein_coding retained_intron MGP_BALBcJ_T0027125.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116308230 116309508 - Mdm2 protein_coding retained_intron MGP_BALBcJ_T0027126.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116315978 116331568 - Mdm2 protein_coding processed_transcript MGP_BALBcJ_T0027127.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116317246 116332201 - Mdm2 protein_coding processed_transcript MGP_BALBcJ_T0027128.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116323768 116331782 - Mdm2 protein_coding processed_transcript MGP_BALBcJ_T0027129.1 MGP_BALBcJ_G0017700.1 mouse_genomes_project 10 116331207 116332204 - Mdm2 protein_coding retained_intron MGP_BALBcJ_T0027360.1 MGP_BALBcJ_G0017771.1 mouse_genomes_project 10 126497656 126505091 + MGP_BALBcJ_P0027360 Tac2 protein_coding protein_coding MGP_BALBcJ_T0027361.1 MGP_BALBcJ_G0017771.1 mouse_genomes_project 10 126498595 126505091 + MGP_BALBcJ_P0027361 Tac2 protein_coding protein_coding MGP_BALBcJ_T0006119.1 MGP_BALBcJ_G0005113.1 mouse_genomes_project 10 94185687 94236847 + 4732465J04Rik lincRNA lincRNA MGP_BALBcJ_T0006120.1 MGP_BALBcJ_G0005113.1 mouse_genomes_project 10 94219109 94237252 + 4732465J04Rik lincRNA lincRNA MGP_BALBcJ_T0024686.1 MGP_BALBcJ_G0016995.1 mouse_genomes_project 10 18422906 18500898 + MGP_BALBcJ_P0024686 Hbs1l protein_coding protein_coding MGP_BALBcJ_T0024687.1 MGP_BALBcJ_G0016995.1 mouse_genomes_project 10 18422906 18437979 + MGP_BALBcJ_P0024687 Hbs1l protein_coding protein_coding MGP_BALBcJ_T0024709.1 MGP_BALBcJ_G0017003.1 mouse_genomes_project 10 19171169 19176239 - MGP_BALBcJ_P0024709 protein_coding protein_coding MGP_BALBcJ_T0026837.1 MGP_BALBcJ_G0017598.1 mouse_genomes_project 10 92020786 92025056 + MGP_BALBcJ_P0026837 Ntn4 protein_coding protein_coding MGP_BALBcJ_T0026838.1 MGP_BALBcJ_G0017598.1 mouse_genomes_project 10 92021154 92128482 + MGP_BALBcJ_P0026838 Ntn4 protein_coding protein_coding MGP_BALBcJ_T0026793.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89483464 89490950 - MGP_BALBcJ_P0026793 Slc25a3 protein_coding protein_coding MGP_BALBcJ_T0026794.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89483681 89490848 - MGP_BALBcJ_P0026794 Slc25a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026795.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89483682 89490894 - MGP_BALBcJ_P0026795 Slc25a3 protein_coding protein_coding MGP_BALBcJ_T0026796.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89483698 89490846 - MGP_BALBcJ_P0026796 Slc25a3 protein_coding protein_coding MGP_BALBcJ_T0026797.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89483901 89486728 - Slc25a3 protein_coding retained_intron MGP_BALBcJ_T0026798.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89485063 89487616 - Slc25a3 protein_coding processed_transcript MGP_BALBcJ_T0026799.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89485089 89489114 - Slc25a3 protein_coding retained_intron MGP_BALBcJ_T0026800.1 MGP_BALBcJ_G0017586.1 mouse_genomes_project 10 89486665 89490913 - Slc25a3 protein_coding retained_intron MGP_BALBcJ_T0027426.1 MGP_BALBcJ_G0017793.1 mouse_genomes_project 10 127053377 127055148 + MGP_BALBcJ_P0027426 Apon protein_coding protein_coding MGP_BALBcJ_T0027428.1 MGP_BALBcJ_G0017795.1 mouse_genomes_project 10 127075667 127099320 + MGP_BALBcJ_P0027428 Stat2 protein_coding protein_coding MGP_BALBcJ_T0027429.1 MGP_BALBcJ_G0017795.1 mouse_genomes_project 10 127075667 127099320 + MGP_BALBcJ_P0027429 Stat2 protein_coding protein_coding MGP_BALBcJ_T0012425.1 MGP_BALBcJ_G0010522.1 mouse_genomes_project 10 129089953 129102430 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0026529.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80851064 80895589 - MGP_BALBcJ_P0026529 Glt8d2 protein_coding protein_coding MGP_BALBcJ_T0026530.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80851937 80854099 - Glt8d2 protein_coding retained_intron MGP_BALBcJ_T0026531.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80852190 80853880 - MGP_BALBcJ_P0026531 Glt8d2 protein_coding protein_coding MGP_BALBcJ_T0026532.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80853427 80895556 - MGP_BALBcJ_P0026532 Glt8d2 protein_coding protein_coding MGP_BALBcJ_T0026533.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80855679 80895556 - MGP_BALBcJ_P0026533 Glt8d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026534.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80868093 80873922 - MGP_BALBcJ_P0026534 Glt8d2 protein_coding protein_coding MGP_BALBcJ_T0026535.1 MGP_BALBcJ_G0017521.1 mouse_genomes_project 10 80872708 80895568 - Glt8d2 protein_coding retained_intron MGP_BALBcJ_T0025274.1 MGP_BALBcJ_G0017207.1 mouse_genomes_project 10 57911498 57937588 + MGP_BALBcJ_P0025274 Vsir protein_coding protein_coding MGP_BALBcJ_T0025275.1 MGP_BALBcJ_G0017207.1 mouse_genomes_project 10 57911552 57922789 + Vsir protein_coding processed_transcript MGP_BALBcJ_T0025276.1 MGP_BALBcJ_G0017207.1 mouse_genomes_project 10 57911554 57922571 + Vsir protein_coding processed_transcript MGP_BALBcJ_T0025277.1 MGP_BALBcJ_G0017207.1 mouse_genomes_project 10 57911631 57923562 + Vsir protein_coding retained_intron MGP_BALBcJ_T0025278.1 MGP_BALBcJ_G0017207.1 mouse_genomes_project 10 57911659 57932672 + MGP_BALBcJ_P0025278 Vsir protein_coding protein_coding MGP_BALBcJ_T0025279.1 MGP_BALBcJ_G0017207.1 mouse_genomes_project 10 57911669 57937572 + MGP_BALBcJ_P0025279 Vsir protein_coding protein_coding MGP_BALBcJ_T0003055.1 MGP_BALBcJ_G0002851.1 mouse_genomes_project 10 84375657 84392806 + 4930486F22Rik antisense antisense MGP_BALBcJ_T0026587.1 MGP_BALBcJ_G0017537.1 mouse_genomes_project 10 82976416 83127919 + MGP_BALBcJ_P0026587 Rfx4 protein_coding protein_coding MGP_BALBcJ_T0026588.1 MGP_BALBcJ_G0017537.1 mouse_genomes_project 10 82982228 83035812 + Rfx4 protein_coding processed_transcript MGP_BALBcJ_T0026589.1 MGP_BALBcJ_G0017537.1 mouse_genomes_project 10 82982228 83035812 + Rfx4 protein_coding processed_transcript MGP_BALBcJ_T0026590.1 MGP_BALBcJ_G0017537.1 mouse_genomes_project 10 83060280 83094293 + Rfx4 protein_coding processed_transcript MGP_BALBcJ_T0026591.1 MGP_BALBcJ_G0017537.1 mouse_genomes_project 10 83060280 83127914 + MGP_BALBcJ_P0026591 Rfx4 protein_coding protein_coding MGP_BALBcJ_T0100431.1 MGP_BALBcJ_G0038467.1 mouse_genomes_project 10 34235246 34235393 - Gm22554 snoRNA snoRNA MGP_BALBcJ_T0026595.1 MGP_BALBcJ_G0017540.1 mouse_genomes_project 10 83326842 83342385 + MGP_BALBcJ_P0026595 Tmem263 protein_coding protein_coding MGP_BALBcJ_T0026583.1 MGP_BALBcJ_G0017535.1 mouse_genomes_project 10 82799697 82837642 + MGP_BALBcJ_P0026583 Tcp11l2 protein_coding protein_coding MGP_BALBcJ_T0026584.1 MGP_BALBcJ_G0017535.1 mouse_genomes_project 10 82799968 82818840 + Tcp11l2 protein_coding retained_intron MGP_BALBcJ_T0026585.1 MGP_BALBcJ_G0017535.1 mouse_genomes_project 10 82818194 82828234 + Tcp11l2 protein_coding retained_intron MGP_BALBcJ_T0026522.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80813260 80824673 + protein_coding processed_transcript MGP_BALBcJ_T0026523.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80813990 80844863 + MGP_BALBcJ_P0026523 protein_coding protein_coding MGP_BALBcJ_T0026524.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80824503 80844879 + protein_coding retained_intron MGP_BALBcJ_T0026525.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80824791 80860834 + MGP_BALBcJ_P0026525 protein_coding protein_coding MGP_BALBcJ_T0026526.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80844597 80845235 + protein_coding retained_intron MGP_BALBcJ_T0026527.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80845011 80860353 + protein_coding retained_intron MGP_BALBcJ_T0026528.1 MGP_BALBcJ_G0017520.1 mouse_genomes_project 10 80847518 80861004 + protein_coding retained_intron MGP_BALBcJ_T0025873.1 MGP_BALBcJ_G0017349.1 mouse_genomes_project 10 75692061 75744286 + MGP_BALBcJ_P0025873 Tspear protein_coding protein_coding MGP_BALBcJ_T0025874.1 MGP_BALBcJ_G0017349.1 mouse_genomes_project 10 75692126 75749548 + MGP_BALBcJ_P0025874 Tspear protein_coding protein_coding MGP_BALBcJ_T0025875.1 MGP_BALBcJ_G0017349.1 mouse_genomes_project 10 75727746 75731167 + Tspear protein_coding retained_intron MGP_BALBcJ_T0026719.1 MGP_BALBcJ_G0017575.1 mouse_genomes_project 10 87229994 87274820 + MGP_BALBcJ_P0026719 Slc5a8 protein_coding protein_coding MGP_BALBcJ_T0027562.1 MGP_BALBcJ_G0017867.1 mouse_genomes_project 10 128679583 128682537 + MGP_BALBcJ_P0027562 Olfr808 protein_coding protein_coding MGP_BALBcJ_T0027563.1 MGP_BALBcJ_G0017867.1 mouse_genomes_project 10 128681598 128682537 + MGP_BALBcJ_P0027563 Olfr808 protein_coding protein_coding MGP_BALBcJ_T0025472.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64812686 64909073 + Jmjd1c protein_coding retained_intron MGP_BALBcJ_T0025473.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64812966 64875465 + Jmjd1c protein_coding retained_intron MGP_BALBcJ_T0025474.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64813053 64942441 + MGP_BALBcJ_P0025474 Jmjd1c protein_coding protein_coding MGP_BALBcJ_T0025475.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64844242 64974966 + MGP_BALBcJ_P0025475 Jmjd1c protein_coding protein_coding MGP_BALBcJ_T0025476.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64844242 64974967 + MGP_BALBcJ_P0025476 Jmjd1c protein_coding protein_coding MGP_BALBcJ_T0025477.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64903076 64933648 + Jmjd1c protein_coding retained_intron MGP_BALBcJ_T0025478.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64903080 64909075 + Jmjd1c protein_coding retained_intron MGP_BALBcJ_T0025479.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64935216 64935833 + Jmjd1c protein_coding retained_intron MGP_BALBcJ_T0025480.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64956490 64971324 + MGP_BALBcJ_P0025480 Jmjd1c protein_coding protein_coding MGP_BALBcJ_T0025481.1 MGP_BALBcJ_G0017259.1 mouse_genomes_project 10 64957264 64963761 + Jmjd1c protein_coding retained_intron MGP_BALBcJ_T0012401.1 MGP_BALBcJ_G0010498.1 mouse_genomes_project 10 72618828 72619260 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025807.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74831737 74841854 + MGP_BALBcJ_P0025807 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025808.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74831767 74841340 + MGP_BALBcJ_P0025808 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025809.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74832180 74849925 + MGP_BALBcJ_P0025809 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025810.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74832708 74849924 + MGP_BALBcJ_P0025810 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025811.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74832764 74845761 + MGP_BALBcJ_P0025811 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025812.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74832777 74842449 + MGP_BALBcJ_P0025812 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025813.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74832815 74841823 + MGP_BALBcJ_P0025813 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0025814.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74841992 74844391 + Slc19a1 protein_coding retained_intron MGP_BALBcJ_T0025815.1 MGP_BALBcJ_G0017329.1 mouse_genomes_project 10 74842283 74860495 + MGP_BALBcJ_P0025815 Slc19a1 protein_coding protein_coding MGP_BALBcJ_T0026536.1 MGP_BALBcJ_G0017522.1 mouse_genomes_project 10 80901097 80914006 + Hcfc2 protein_coding processed_transcript MGP_BALBcJ_T0026537.1 MGP_BALBcJ_G0017522.1 mouse_genomes_project 10 80903954 80947025 + MGP_BALBcJ_P0026537 Hcfc2 protein_coding protein_coding MGP_BALBcJ_T0026538.1 MGP_BALBcJ_G0017522.1 mouse_genomes_project 10 80904158 80917179 + MGP_BALBcJ_P0026538 Hcfc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0026539.1 MGP_BALBcJ_G0017522.1 mouse_genomes_project 10 80933281 80945933 + MGP_BALBcJ_P0026539 Hcfc2 protein_coding protein_coding MGP_BALBcJ_T0003022.1 MGP_BALBcJ_G0002825.1 mouse_genomes_project 10 60722371 60724236 - Gm16143 antisense antisense MGP_BALBcJ_T0017056.1 MGP_BALBcJ_G0015068.1 mouse_genomes_project 10 17640687 17643526 - 4930403O15Rik processed_transcript processed_transcript MGP_BALBcJ_T0012387.1 MGP_BALBcJ_G0010484.1 mouse_genomes_project 10 49926327 49926887 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0025322.1 MGP_BALBcJ_G0017222.1 mouse_genomes_project 10 59252685 59278350 + MGP_BALBcJ_P0025322 Ppa1 protein_coding protein_coding MGP_BALBcJ_T0025323.1 MGP_BALBcJ_G0017222.1 mouse_genomes_project 10 59252754 59256989 + Ppa1 protein_coding retained_intron MGP_BALBcJ_T0025324.1 MGP_BALBcJ_G0017222.1 mouse_genomes_project 10 59266876 59269614 + Ppa1 protein_coding processed_transcript MGP_BALBcJ_T0025325.1 MGP_BALBcJ_G0017222.1 mouse_genomes_project 10 59267877 59269794 + Ppa1 protein_coding retained_intron MGP_BALBcJ_T0003080.1 MGP_BALBcJ_G0002867.1 mouse_genomes_project 10 118083409 118084356 - Gm16321 antisense antisense MGP_BALBcJ_T0025125.1 MGP_BALBcJ_G0017159.1 mouse_genomes_project 10 49974313 50062130 + MGP_BALBcJ_P0025125 Dcbld1 protein_coding protein_coding MGP_BALBcJ_T0025126.1 MGP_BALBcJ_G0017159.1 mouse_genomes_project 10 49974327 50029548 + Dcbld1 protein_coding retained_intron MGP_BALBcJ_T0025127.1 MGP_BALBcJ_G0017159.1 mouse_genomes_project 10 49974331 50062132 + MGP_BALBcJ_P0025127 Dcbld1 protein_coding protein_coding MGP_BALBcJ_T0026436.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79486175 79501223 - MGP_BALBcJ_P0026436 Celf5 protein_coding protein_coding MGP_BALBcJ_T0026437.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79486176 79511190 - MGP_BALBcJ_P0026437 Celf5 protein_coding protein_coding MGP_BALBcJ_T0026438.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79487871 79502940 - MGP_BALBcJ_P0026438 Celf5 protein_coding protein_coding MGP_BALBcJ_T0026439.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79488489 79511165 - MGP_BALBcJ_P0026439 Celf5 protein_coding protein_coding MGP_BALBcJ_T0026440.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79493956 79498496 - Celf5 protein_coding retained_intron MGP_BALBcJ_T0026441.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79494448 79501474 - Celf5 protein_coding retained_intron MGP_BALBcJ_T0026442.1 MGP_BALBcJ_G0017500.1 mouse_genomes_project 10 79494700 79511153 - Celf5 protein_coding retained_intron MGP_BALBcJ_T0012393.1 MGP_BALBcJ_G0010490.1 mouse_genomes_project 10 58901376 58901741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003037.1 MGP_BALBcJ_G0002838.1 mouse_genomes_project 10 78277939 78278502 - Gm15122 antisense antisense MGP_BALBcJ_T0025680.1 MGP_BALBcJ_G0017292.1 mouse_genomes_project 10 73173531 73212046 + MGP_BALBcJ_P0025680 Upb1 protein_coding protein_coding MGP_BALBcJ_T0025681.1 MGP_BALBcJ_G0017292.1 mouse_genomes_project 10 73173578 73192405 + Upb1 protein_coding retained_intron MGP_BALBcJ_T0025682.1 MGP_BALBcJ_G0017292.1 mouse_genomes_project 10 73176665 73195176 + Upb1 protein_coding retained_intron MGP_BALBcJ_T0025684.1 MGP_BALBcJ_G0017292.1 mouse_genomes_project 10 73195579 73197718 + Upb1 protein_coding retained_intron MGP_BALBcJ_T0025946.1 MGP_BALBcJ_G0017369.1 mouse_genomes_project 10 76619021 76625165 - MGP_BALBcJ_P0025946 Ccdc105 protein_coding protein_coding MGP_BALBcJ_T0025936.1 MGP_BALBcJ_G0017361.1 mouse_genomes_project 10 76267025 76279668 - MGP_BALBcJ_P0025936 Rrp1 protein_coding protein_coding MGP_BALBcJ_T0024584.1 MGP_BALBcJ_G0016964.1 mouse_genomes_project 10 11693193 11749500 - MGP_BALBcJ_P0024584 Vta1 protein_coding protein_coding MGP_BALBcJ_T0024585.1 MGP_BALBcJ_G0016964.1 mouse_genomes_project 10 11693793 11749440 - MGP_BALBcJ_P0024585 Vta1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024586.1 MGP_BALBcJ_G0016964.1 mouse_genomes_project 10 11694101 11707989 - Vta1 protein_coding retained_intron MGP_BALBcJ_T0024587.1 MGP_BALBcJ_G0016964.1 mouse_genomes_project 10 11694226 11749399 - MGP_BALBcJ_P0024587 Vta1 protein_coding protein_coding MGP_BALBcJ_T0024588.1 MGP_BALBcJ_G0016964.1 mouse_genomes_project 10 11694277 11723829 - MGP_BALBcJ_P0024588 Vta1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0024589.1 MGP_BALBcJ_G0016964.1 mouse_genomes_project 10 11724628 11749405 - Vta1 protein_coding processed_transcript MGP_BALBcJ_T0025724.1 MGP_BALBcJ_G0017301.1 mouse_genomes_project 10 73548942 73556232 - MGP_BALBcJ_P0025724 Gstt3 protein_coding protein_coding MGP_BALBcJ_T0025725.1 MGP_BALBcJ_G0017301.1 mouse_genomes_project 10 73549627 73552088 - Gstt3 protein_coding processed_transcript MGP_BALBcJ_T0025726.1 MGP_BALBcJ_G0017301.1 mouse_genomes_project 10 73549747 73555836 - MGP_BALBcJ_P0025726 Gstt3 protein_coding protein_coding MGP_BALBcJ_T0025727.1 MGP_BALBcJ_G0017301.1 mouse_genomes_project 10 73550227 73551692 - MGP_BALBcJ_P0025727 Gstt3 protein_coding protein_coding MGP_BALBcJ_T0025728.1 MGP_BALBcJ_G0017301.1 mouse_genomes_project 10 73551581 73555868 - MGP_BALBcJ_P0025728 Gstt3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088548.1 MGP_BALBcJ_G0033474.1 mouse_genomes_project 8 24351180 24355306 + MGP_BALBcJ_P0088548 Zfp703 protein_coding protein_coding MGP_BALBcJ_T0088549.1 MGP_BALBcJ_G0033474.1 mouse_genomes_project 8 24351180 24355306 + MGP_BALBcJ_P0088549 Zfp703 protein_coding protein_coding MGP_BALBcJ_T0088320.1 MGP_BALBcJ_G0033387.1 mouse_genomes_project 8 15958323 15976454 - Xkr5 protein_coding processed_transcript MGP_BALBcJ_T0088321.1 MGP_BALBcJ_G0033387.1 mouse_genomes_project 8 15958323 15976558 - MGP_BALBcJ_P0088321 Xkr5 protein_coding protein_coding MGP_BALBcJ_T0088322.1 MGP_BALBcJ_G0033387.1 mouse_genomes_project 8 15958323 15976556 - MGP_BALBcJ_P0088322 Xkr5 protein_coding protein_coding MGP_BALBcJ_T0088323.1 MGP_BALBcJ_G0033387.1 mouse_genomes_project 8 15958326 15976499 - MGP_BALBcJ_P0088323 Xkr5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088324.1 MGP_BALBcJ_G0033387.1 mouse_genomes_project 8 15958682 15976520 - MGP_BALBcJ_P0088324 Xkr5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090854.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121599295 121616410 + MGP_BALBcJ_P0090854 Spg7 protein_coding protein_coding MGP_BALBcJ_T0090855.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121601615 121634086 + MGP_BALBcJ_P0090855 Spg7 protein_coding protein_coding MGP_BALBcJ_T0090856.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121601863 121634089 + MGP_BALBcJ_P0090856 Spg7 protein_coding protein_coding MGP_BALBcJ_T0090857.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121601912 121634079 + MGP_BALBcJ_P0090857 Spg7 protein_coding protein_coding MGP_BALBcJ_T0090858.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121601944 121634077 + Spg7 protein_coding retained_intron MGP_BALBcJ_T0090859.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121610198 121625381 + MGP_BALBcJ_P0090859 Spg7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090860.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121616831 121625407 + Spg7 protein_coding retained_intron MGP_BALBcJ_T0090861.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121617203 121634079 + MGP_BALBcJ_P0090861 Spg7 protein_coding protein_coding MGP_BALBcJ_T0090862.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121623647 121630082 + Spg7 protein_coding retained_intron MGP_BALBcJ_T0090863.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121623817 121628135 + Spg7 protein_coding processed_transcript MGP_BALBcJ_T0090864.1 MGP_BALBcJ_G0034214.1 mouse_genomes_project 8 121628094 121634079 + MGP_BALBcJ_P0090864 Spg7 protein_coding protein_coding MGP_BALBcJ_T0089923.1 MGP_BALBcJ_G0033898.1 mouse_genomes_project 8 86371329 86412157 + MGP_BALBcJ_P0089923 Nod2 protein_coding protein_coding MGP_BALBcJ_T0089924.1 MGP_BALBcJ_G0033898.1 mouse_genomes_project 8 86371329 86412157 + MGP_BALBcJ_P0089924 Nod2 protein_coding protein_coding MGP_BALBcJ_T0089925.1 MGP_BALBcJ_G0033898.1 mouse_genomes_project 8 86371398 86389971 + Nod2 protein_coding retained_intron MGP_BALBcJ_T0089926.1 MGP_BALBcJ_G0033898.1 mouse_genomes_project 8 86375400 86412156 + MGP_BALBcJ_P0089926 Nod2 protein_coding protein_coding MGP_BALBcJ_T0090705.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119152897 119167159 - MGP_BALBcJ_P0090705 Emc8 protein_coding protein_coding MGP_BALBcJ_T0090706.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119154961 119167193 - Emc8 protein_coding retained_intron MGP_BALBcJ_T0090707.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119156834 119167754 - MGP_BALBcJ_P0090707 Emc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090708.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119157007 119166944 - MGP_BALBcJ_P0090708 Emc8 protein_coding protein_coding MGP_BALBcJ_T0090709.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119157033 119167017 - MGP_BALBcJ_P0090709 Emc8 protein_coding protein_coding MGP_BALBcJ_T0090710.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119158957 119167184 - MGP_BALBcJ_P0090710 Emc8 protein_coding protein_coding MGP_BALBcJ_T0090711.1 MGP_BALBcJ_G0034178.1 mouse_genomes_project 8 119159630 119167294 - Emc8 protein_coding retained_intron MGP_BALBcJ_T0088558.1 MGP_BALBcJ_G0033479.1 mouse_genomes_project 8 24517312 24555476 - MGP_BALBcJ_P0088558 Rab11fip1 protein_coding protein_coding MGP_BALBcJ_T0088559.1 MGP_BALBcJ_G0033479.1 mouse_genomes_project 8 24517312 24555476 - MGP_BALBcJ_P0088559 Rab11fip1 protein_coding protein_coding MGP_BALBcJ_T0090618.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 116745479 117800025 + MGP_BALBcJ_P0090618 Cdh13 protein_coding protein_coding MGP_BALBcJ_T0090619.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 116745501 117322306 + Cdh13 protein_coding retained_intron MGP_BALBcJ_T0090620.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 116745521 117442329 + Cdh13 protein_coding retained_intron MGP_BALBcJ_T0090621.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 116745542 117227419 + Cdh13 protein_coding retained_intron MGP_BALBcJ_T0090622.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 116745543 117675472 + Cdh13 protein_coding retained_intron MGP_BALBcJ_T0090623.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 116776152 117326533 + Cdh13 protein_coding processed_transcript MGP_BALBcJ_T0090624.1 MGP_BALBcJ_G0034152.1 mouse_genomes_project 8 117751384 117788919 + Cdh13 protein_coding processed_transcript MGP_BALBcJ_T0090029.1 MGP_BALBcJ_G0033935.1 mouse_genomes_project 8 92165343 92174275 + MGP_BALBcJ_P0090029 Herpud1 protein_coding protein_coding MGP_BALBcJ_T0090030.1 MGP_BALBcJ_G0033935.1 mouse_genomes_project 8 92165400 92174256 + MGP_BALBcJ_P0090030 Herpud1 protein_coding protein_coding MGP_BALBcJ_T0090031.1 MGP_BALBcJ_G0033935.1 mouse_genomes_project 8 92166458 92171364 + Herpud1 protein_coding processed_transcript MGP_BALBcJ_T0090032.1 MGP_BALBcJ_G0033935.1 mouse_genomes_project 8 92166504 92171204 + Herpud1 protein_coding processed_transcript MGP_BALBcJ_T0090033.1 MGP_BALBcJ_G0033935.1 mouse_genomes_project 8 92172428 92173807 + Herpud1 protein_coding retained_intron MGP_BALBcJ_T0089450.1 MGP_BALBcJ_G0033754.1 mouse_genomes_project 8 69903369 69921705 + MGP_BALBcJ_P0089450 Ap1m1 protein_coding protein_coding MGP_BALBcJ_T0089451.1 MGP_BALBcJ_G0033754.1 mouse_genomes_project 8 69903461 69914398 + MGP_BALBcJ_P0089451 Ap1m1 protein_coding protein_coding MGP_BALBcJ_T0089452.1 MGP_BALBcJ_G0033754.1 mouse_genomes_project 8 69903674 69916334 + MGP_BALBcJ_P0089452 Ap1m1 protein_coding protein_coding MGP_BALBcJ_T0089453.1 MGP_BALBcJ_G0033754.1 mouse_genomes_project 8 69917373 69920927 + Ap1m1 protein_coding retained_intron MGP_BALBcJ_T0089454.1 MGP_BALBcJ_G0033754.1 mouse_genomes_project 8 69917453 69921233 + Ap1m1 protein_coding retained_intron MGP_BALBcJ_T0010933.1 MGP_BALBcJ_G0009058.1 mouse_genomes_project 8 13201907 13201989 - Mir3106 miRNA miRNA MGP_BALBcJ_T0090185.1 MGP_BALBcJ_G0033991.1 mouse_genomes_project 8 102776606 102778733 - MGP_BALBcJ_P0090185 Fam96b protein_coding protein_coding MGP_BALBcJ_T0090186.1 MGP_BALBcJ_G0033991.1 mouse_genomes_project 8 102776608 102778467 - Fam96b protein_coding retained_intron MGP_BALBcJ_T0090187.1 MGP_BALBcJ_G0033991.1 mouse_genomes_project 8 102776615 102778469 - MGP_BALBcJ_P0090187 Fam96b protein_coding protein_coding MGP_BALBcJ_T0090823.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007476 121077989 - MGP_BALBcJ_P0090823 Piezo1 protein_coding protein_coding MGP_BALBcJ_T0090824.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007490 121025916 - MGP_BALBcJ_P0090824 Piezo1 protein_coding protein_coding MGP_BALBcJ_T0090825.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007499 121010559 - Piezo1 protein_coding retained_intron MGP_BALBcJ_T0090826.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007760 121077698 - MGP_BALBcJ_P0090826 Piezo1 protein_coding unknown_likely_coding MGP_BALBcJ_T0090827.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007760 121025915 - MGP_BALBcJ_P0090827 Piezo1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090828.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007819 121008779 - Piezo1 protein_coding retained_intron MGP_BALBcJ_T0090829.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121007858 121008455 - Piezo1 protein_coding retained_intron MGP_BALBcJ_T0090830.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121009145 121009648 - Piezo1 protein_coding retained_intron MGP_BALBcJ_T0090831.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121010643 121011403 - Piezo1 protein_coding retained_intron MGP_BALBcJ_T0090832.1 MGP_BALBcJ_G0034203.1 mouse_genomes_project 8 121011702 121024234 - MGP_BALBcJ_P0090832 Piezo1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089964.1 MGP_BALBcJ_G0033909.1 mouse_genomes_project 8 90115813 90119765 + MGP_BALBcJ_P0089964 protein_coding protein_coding MGP_BALBcJ_T0018411.1 MGP_BALBcJ_G0015646.1 mouse_genomes_project 8 15670310 15696024 - Gm16725 processed_transcript processed_transcript MGP_BALBcJ_T0005363.1 MGP_BALBcJ_G0004546.1 mouse_genomes_project 8 107169808 107173395 - Gm20686 antisense antisense MGP_BALBcJ_T0090940.1 MGP_BALBcJ_G0034232.1 mouse_genomes_project 8 122077613 122095437 + MGP_BALBcJ_P0090940 Gas8 protein_coding protein_coding MGP_BALBcJ_T0089965.1 MGP_BALBcJ_G0033910.1 mouse_genomes_project 8 90431916 90438458 + MGP_BALBcJ_P0089965 Irx6 protein_coding protein_coding MGP_BALBcJ_T0089966.1 MGP_BALBcJ_G0033910.1 mouse_genomes_project 8 90432334 90438458 + MGP_BALBcJ_P0089966 Irx6 protein_coding protein_coding MGP_BALBcJ_T0100128.1 MGP_BALBcJ_G0038164.1 mouse_genomes_project 8 57676682 57676786 + Gm26164 snRNA snRNA MGP_BALBcJ_T0009183.1 MGP_BALBcJ_G0007375.1 mouse_genomes_project 8 122307615 122317181 - 4732419C18Rik lincRNA lincRNA MGP_BALBcJ_T0089265.1 MGP_BALBcJ_G0033693.1 mouse_genomes_project 8 68229493 68240283 - MGP_BALBcJ_P0089265 Ssbp4 protein_coding protein_coding MGP_BALBcJ_T0088579.1 MGP_BALBcJ_G0033491.1 mouse_genomes_project 8 28534479 28543532 - MGP_BALBcJ_P0088579 Mak16 protein_coding protein_coding MGP_BALBcJ_T0089298.1 MGP_BALBcJ_G0033710.1 mouse_genomes_project 8 68503036 68505336 + MGP_BALBcJ_P0089298 protein_coding protein_coding MGP_BALBcJ_T0101430.1 MGP_BALBcJ_G0039466.1 mouse_genomes_project 8 120194333 120194412 - Gm23299 snoRNA snoRNA MGP_BALBcJ_T0089375.1 MGP_BALBcJ_G0033734.1 mouse_genomes_project 8 69215680 69233099 + MGP_BALBcJ_P0089375 Slc27a1 protein_coding protein_coding MGP_BALBcJ_T0088259.1 MGP_BALBcJ_G0033370.1 mouse_genomes_project 8 10959684 10965178 - MGP_BALBcJ_P0088259 Coprs protein_coding protein_coding MGP_BALBcJ_T0089920.1 MGP_BALBcJ_G0033896.1 mouse_genomes_project 8 86242559 86318797 + MGP_BALBcJ_P0089920 Nkd1 protein_coding protein_coding MGP_BALBcJ_T0089921.1 MGP_BALBcJ_G0033896.1 mouse_genomes_project 8 86248864 86318797 + MGP_BALBcJ_P0089921 Nkd1 protein_coding protein_coding MGP_BALBcJ_T0005304.1 MGP_BALBcJ_G0004500.1 mouse_genomes_project 8 8906570 8907993 - Gm15875 antisense antisense MGP_BALBcJ_T0088911.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54181891 54196565 - MGP_BALBcJ_P0088911 Cep44 protein_coding protein_coding MGP_BALBcJ_T0088912.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54181891 54204975 - MGP_BALBcJ_P0088912 Cep44 protein_coding protein_coding MGP_BALBcJ_T0088913.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54194006 54204961 - MGP_BALBcJ_P0088913 Cep44 protein_coding protein_coding MGP_BALBcJ_T0088914.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54195293 54204917 - MGP_BALBcJ_P0088914 Cep44 protein_coding protein_coding MGP_BALBcJ_T0088915.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54195360 54204990 - MGP_BALBcJ_P0088915 Cep44 protein_coding protein_coding MGP_BALBcJ_T0088916.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54196551 54205165 - MGP_BALBcJ_P0088916 Cep44 protein_coding protein_coding MGP_BALBcJ_T0088917.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54203099 54204376 - Cep44 protein_coding processed_transcript MGP_BALBcJ_T0088918.1 MGP_BALBcJ_G0033598.1 mouse_genomes_project 8 54203447 54204921 - Cep44 protein_coding processed_transcript MGP_BALBcJ_T0015984.1 MGP_BALBcJ_G0014081.1 mouse_genomes_project 8 115563197 115563601 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101407.1 MGP_BALBcJ_G0039443.1 mouse_genomes_project 8 70813465 70813605 - Gm22532 snoRNA snoRNA MGP_BALBcJ_T0090865.1 MGP_BALBcJ_G0034215.1 mouse_genomes_project 8 121645097 121648476 + MGP_BALBcJ_P0090865 Rpl13 protein_coding protein_coding MGP_BALBcJ_T0090866.1 MGP_BALBcJ_G0034215.1 mouse_genomes_project 8 121645398 121646387 + Rpl13 protein_coding retained_intron MGP_BALBcJ_T0090867.1 MGP_BALBcJ_G0034215.1 mouse_genomes_project 8 121645400 121647211 + Rpl13 protein_coding retained_intron MGP_BALBcJ_T0090868.1 MGP_BALBcJ_G0034215.1 mouse_genomes_project 8 121645400 121648476 + Rpl13 protein_coding retained_intron MGP_BALBcJ_T0011710.1 MGP_BALBcJ_G0009835.1 mouse_genomes_project 8 110939743 110939848 + Gm22664 misc_RNA misc_RNA MGP_BALBcJ_T0005299.1 MGP_BALBcJ_G0004495.1 mouse_genomes_project 8 199344 200282 + Gm16180 antisense antisense MGP_BALBcJ_T0102842.1 MGP_BALBcJ_G0040657.1 mouse_genomes_project 8 97504166 97505555 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0015948.1 MGP_BALBcJ_G0014045.1 mouse_genomes_project 8 49862890 49863856 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088338.1 MGP_BALBcJ_G0033400.1 mouse_genomes_project 8 16344233 16346178 + MGP_BALBcJ_P0088338 Defb3 protein_coding protein_coding MGP_BALBcJ_T0005331.1 MGP_BALBcJ_G0004519.1 mouse_genomes_project 8 43230241 43327236 - Sorbs2os antisense antisense MGP_BALBcJ_T0089263.1 MGP_BALBcJ_G0033691.1 mouse_genomes_project 8 68171749 68224867 + MGP_BALBcJ_P0089263 Ell protein_coding protein_coding MGP_BALBcJ_T0015922.1 MGP_BALBcJ_G0014019.1 mouse_genomes_project 8 15674615 15674990 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090169.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102643615 102655596 - Nae1 protein_coding processed_transcript MGP_BALBcJ_T0090170.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102643615 102667395 - MGP_BALBcJ_P0090170 Nae1 protein_coding protein_coding MGP_BALBcJ_T0090171.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102643615 102667394 - MGP_BALBcJ_P0090171 Nae1 protein_coding protein_coding MGP_BALBcJ_T0090172.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102643621 102649570 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090173.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102643624 102650624 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090174.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102645788 102649630 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090175.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102650117 102660330 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090176.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102652366 102655628 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090177.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102655319 102667346 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090178.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102655748 102659749 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0090179.1 MGP_BALBcJ_G0033986.1 mouse_genomes_project 8 102660444 102667372 - Nae1 protein_coding retained_intron MGP_BALBcJ_T0089389.1 MGP_BALBcJ_G0033737.1 mouse_genomes_project 8 69258733 69273246 + MGP_BALBcJ_P0089389 Colgalt1 protein_coding protein_coding MGP_BALBcJ_T0090111.1 MGP_BALBcJ_G0033960.1 mouse_genomes_project 8 93127431 93149734 + MGP_BALBcJ_P0090111 Mmp15 protein_coding protein_coding MGP_BALBcJ_T0090362.1 MGP_BALBcJ_G0034064.1 mouse_genomes_project 8 105147888 105231861 + MGP_BALBcJ_P0090362 Sntb2 protein_coding protein_coding MGP_BALBcJ_T0015912.1 MGP_BALBcJ_G0014009.1 mouse_genomes_project 8 958598 969491 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090296.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104060743 104073088 + MGP_BALBcJ_P0090296 Edc4 protein_coding protein_coding MGP_BALBcJ_T0090297.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104060813 104073071 + MGP_BALBcJ_P0090297 Edc4 protein_coding protein_coding MGP_BALBcJ_T0090298.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104060939 104074771 + MGP_BALBcJ_P0090298 Edc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090299.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104066831 104068008 + Edc4 protein_coding retained_intron MGP_BALBcJ_T0090300.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104067240 104069395 + MGP_BALBcJ_P0090300 Edc4 protein_coding protein_coding MGP_BALBcJ_T0090301.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104067254 104068576 + MGP_BALBcJ_P0090301 Edc4 protein_coding protein_coding MGP_BALBcJ_T0090302.1 MGP_BALBcJ_G0034038.1 mouse_genomes_project 8 104070130 104071191 + Edc4 protein_coding retained_intron MGP_BALBcJ_T0090409.1 MGP_BALBcJ_G0034078.1 mouse_genomes_project 8 107757659 107807832 + MGP_BALBcJ_P0090409 Pmfbp1 protein_coding protein_coding MGP_BALBcJ_T0002323.1 MGP_BALBcJ_G0002234.1 mouse_genomes_project 8 12094052 12098152 - TEC TEC MGP_BALBcJ_T0088565.1 MGP_BALBcJ_G0033483.1 mouse_genomes_project 8 24754573 24783687 + MGP_BALBcJ_P0088565 Chrnb3 protein_coding protein_coding MGP_BALBcJ_T0089643.1 MGP_BALBcJ_G0033820.1 mouse_genomes_project 8 81619460 81642570 + MGP_BALBcJ_P0089643 Prkaca protein_coding protein_coding MGP_BALBcJ_T0089266.1 MGP_BALBcJ_G0033694.1 mouse_genomes_project 8 68248891 68252902 + MGP_BALBcJ_P0089266 Lrrc25 protein_coding protein_coding MGP_BALBcJ_T0088202.1 MGP_BALBcJ_G0033350.1 mouse_genomes_project 8 10123156 10141417 + MGP_BALBcJ_P0088202 F10 protein_coding protein_coding MGP_BALBcJ_T0088203.1 MGP_BALBcJ_G0033350.1 mouse_genomes_project 8 10123421 10131672 + MGP_BALBcJ_P0088203 F10 protein_coding protein_coding MGP_BALBcJ_T0088204.1 MGP_BALBcJ_G0033350.1 mouse_genomes_project 8 10123672 10141399 + MGP_BALBcJ_P0088204 F10 protein_coding protein_coding MGP_BALBcJ_T0009051.1 MGP_BALBcJ_G0007278.1 mouse_genomes_project 8 9787624 9799720 - Gm15348 lincRNA lincRNA MGP_BALBcJ_T0005352.1 MGP_BALBcJ_G0004537.1 mouse_genomes_project 8 83009573 83009997 + antisense antisense MGP_BALBcJ_T0089893.1 MGP_BALBcJ_G0033891.1 mouse_genomes_project 8 85835221 85851758 + MGP_BALBcJ_P0089893 Cnep1r1 protein_coding protein_coding MGP_BALBcJ_T0089894.1 MGP_BALBcJ_G0033891.1 mouse_genomes_project 8 85835230 85847494 + Cnep1r1 protein_coding processed_transcript MGP_BALBcJ_T0089895.1 MGP_BALBcJ_G0033891.1 mouse_genomes_project 8 85835239 85851762 + MGP_BALBcJ_P0089895 Cnep1r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089896.1 MGP_BALBcJ_G0033891.1 mouse_genomes_project 8 85835252 85851133 + Cnep1r1 protein_coding retained_intron MGP_BALBcJ_T0089897.1 MGP_BALBcJ_G0033891.1 mouse_genomes_project 8 85835252 85848327 + MGP_BALBcJ_P0089897 Cnep1r1 protein_coding protein_coding MGP_BALBcJ_T0089898.1 MGP_BALBcJ_G0033891.1 mouse_genomes_project 8 85835259 85847710 + MGP_BALBcJ_P0089898 Cnep1r1 protein_coding protein_coding MGP_BALBcJ_T0100160.1 MGP_BALBcJ_G0038196.1 mouse_genomes_project 8 122922270 122922356 + Gm24459 snRNA snRNA MGP_BALBcJ_T0015913.1 MGP_BALBcJ_G0014010.1 mouse_genomes_project 8 1802129 1802525 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089300.1 MGP_BALBcJ_G0033712.1 mouse_genomes_project 8 68522703 68532555 - MGP_BALBcJ_P0089300 Slc5a5 protein_coding protein_coding MGP_BALBcJ_T0090653.1 MGP_BALBcJ_G0034164.1 mouse_genomes_project 8 118146082 118168601 + MGP_BALBcJ_P0090653 Wfdc1 protein_coding protein_coding MGP_BALBcJ_T0009144.1 MGP_BALBcJ_G0007346.1 mouse_genomes_project 8 92156822 92158524 + Gm15889 lincRNA lincRNA MGP_BALBcJ_T0089124.1 MGP_BALBcJ_G0033660.1 mouse_genomes_project 8 67495163 67501333 - MGP_BALBcJ_P0089124 Yjefn3 protein_coding unknown_likely_coding MGP_BALBcJ_T0089125.1 MGP_BALBcJ_G0033660.1 mouse_genomes_project 8 67495170 67510236 - MGP_BALBcJ_P0089125 Yjefn3 protein_coding protein_coding MGP_BALBcJ_T0089126.1 MGP_BALBcJ_G0033660.1 mouse_genomes_project 8 67495170 67498339 - MGP_BALBcJ_P0089126 Yjefn3 protein_coding protein_coding MGP_BALBcJ_T0089127.1 MGP_BALBcJ_G0033660.1 mouse_genomes_project 8 67495172 67495558 - Yjefn3 protein_coding processed_transcript MGP_BALBcJ_T0002331.1 MGP_BALBcJ_G0002241.1 mouse_genomes_project 8 103809538 103811588 + TEC TEC MGP_BALBcJ_T0089098.1 MGP_BALBcJ_G0033653.1 mouse_genomes_project 8 67348164 67379229 - MGP_BALBcJ_P0089098 Gm20422 protein_coding protein_coding MGP_BALBcJ_T0089100.1 MGP_BALBcJ_G0033653.1 mouse_genomes_project 8 67348486 67371207 - MGP_BALBcJ_P0089100 Gm20422 protein_coding protein_coding MGP_BALBcJ_T0005303.1 MGP_BALBcJ_G0004499.1 mouse_genomes_project 8 8459467 8478210 - Gm15419 antisense antisense MGP_BALBcJ_T0088838.1 MGP_BALBcJ_G0033572.1 mouse_genomes_project 8 44515574 44558599 + Enpp6 protein_coding retained_intron MGP_BALBcJ_T0088839.1 MGP_BALBcJ_G0033572.1 mouse_genomes_project 8 44515576 44618336 + Enpp6 protein_coding retained_intron MGP_BALBcJ_T0088840.1 MGP_BALBcJ_G0033572.1 mouse_genomes_project 8 44515576 44618336 + MGP_BALBcJ_P0088840 Enpp6 protein_coding protein_coding MGP_BALBcJ_T0088841.1 MGP_BALBcJ_G0033572.1 mouse_genomes_project 8 44515603 44611832 + MGP_BALBcJ_P0088841 Enpp6 protein_coding protein_coding MGP_BALBcJ_T0088842.1 MGP_BALBcJ_G0033572.1 mouse_genomes_project 8 44597525 44612514 + MGP_BALBcJ_P0088842 Enpp6 protein_coding protein_coding MGP_BALBcJ_T0089087.1 MGP_BALBcJ_G0033647.1 mouse_genomes_project 8 66955556 66957393 - MGP_BALBcJ_P0089087 protein_coding protein_coding MGP_BALBcJ_T0089883.1 MGP_BALBcJ_G0033887.1 mouse_genomes_project 8 84529118 84573167 - MGP_BALBcJ_P0089883 N4bp1 protein_coding protein_coding MGP_BALBcJ_T0088468.1 MGP_BALBcJ_G0033452.1 mouse_genomes_project 8 22286210 22353635 - MGP_BALBcJ_P0088468 Adam9 protein_coding protein_coding MGP_BALBcJ_T0090092.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93005410 93077768 - MGP_BALBcJ_P0090092 Cngb1 protein_coding protein_coding MGP_BALBcJ_T0090093.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93007346 93049007 - MGP_BALBcJ_P0090093 Cngb1 protein_coding protein_coding MGP_BALBcJ_T0090094.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93007352 93049027 - MGP_BALBcJ_P0090094 Cngb1 protein_coding protein_coding MGP_BALBcJ_T0090095.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93060787 93075042 - Cngb1 protein_coding retained_intron MGP_BALBcJ_T0090096.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93060787 93075042 - Cngb1 protein_coding retained_intron MGP_BALBcJ_T0090097.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93060787 93063860 - Cngb1 protein_coding retained_intron MGP_BALBcJ_T0090098.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93060787 93077768 - MGP_BALBcJ_P0090098 Cngb1 protein_coding protein_coding MGP_BALBcJ_T0090099.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93060787 93064273 - MGP_BALBcJ_P0090099 Cngb1 protein_coding protein_coding MGP_BALBcJ_T0090100.1 MGP_BALBcJ_G0033956.1 mouse_genomes_project 8 93060790 93077753 - Cngb1 protein_coding retained_intron MGP_BALBcJ_T0098658.1 MGP_BALBcJ_G0036712.1 mouse_genomes_project 8 42114867 42114974 + Gm26089 rRNA rRNA MGP_BALBcJ_T0009105.1 MGP_BALBcJ_G0007322.1 mouse_genomes_project 8 82327282 82331575 + Gm26664 lincRNA lincRNA MGP_BALBcJ_T0010988.1 MGP_BALBcJ_G0009113.1 mouse_genomes_project 8 105322381 105322463 - Mir7075 miRNA miRNA MGP_BALBcJ_T0099022.1 MGP_BALBcJ_G0037064.1 mouse_genomes_project 8 118581042 118583719 + Gm15898 sense_intronic sense_intronic MGP_BALBcJ_T0090625.1 MGP_BALBcJ_G0034153.1 mouse_genomes_project 8 117816859 117821295 + MGP_BALBcJ_P0090625 Hsbp1 protein_coding protein_coding MGP_BALBcJ_T0089941.1 MGP_BALBcJ_G0033905.1 mouse_genomes_project 8 88869176 88888402 - MGP_BALBcJ_P0089941 Aktip protein_coding protein_coding MGP_BALBcJ_T0089945.1 MGP_BALBcJ_G0033905.1 mouse_genomes_project 8 88880801 88891504 - MGP_BALBcJ_P0089945 Aktip protein_coding protein_coding MGP_BALBcJ_T0089946.1 MGP_BALBcJ_G0033905.1 mouse_genomes_project 8 88880801 88890981 - MGP_BALBcJ_P0089946 Aktip protein_coding protein_coding MGP_BALBcJ_T0089947.1 MGP_BALBcJ_G0033905.1 mouse_genomes_project 8 88881756 88891062 - MGP_BALBcJ_P0089947 Aktip protein_coding protein_coding MGP_BALBcJ_T0089948.1 MGP_BALBcJ_G0033905.1 mouse_genomes_project 8 88881918 88891066 - MGP_BALBcJ_P0089948 Aktip protein_coding protein_coding MGP_BALBcJ_T0089949.1 MGP_BALBcJ_G0033905.1 mouse_genomes_project 8 88888335 88889140 - Aktip protein_coding processed_transcript MGP_BALBcJ_T0088138.1 MGP_BALBcJ_G0033336.1 mouse_genomes_project 8 8577431 8614302 - MGP_BALBcJ_P0088138 Cars2 protein_coding protein_coding MGP_BALBcJ_T0088139.1 MGP_BALBcJ_G0033336.1 mouse_genomes_project 8 8577433 8614208 - MGP_BALBcJ_P0088139 Cars2 protein_coding unknown_likely_coding MGP_BALBcJ_T0090601.1 MGP_BALBcJ_G0034144.1 mouse_genomes_project 8 115434968 115520007 - MGP_BALBcJ_P0090601 Pkd1l2 protein_coding protein_coding MGP_BALBcJ_T0090602.1 MGP_BALBcJ_G0034144.1 mouse_genomes_project 8 115434968 115520007 - MGP_BALBcJ_P0090602 Pkd1l2 protein_coding protein_coding MGP_BALBcJ_T0090603.1 MGP_BALBcJ_G0034144.1 mouse_genomes_project 8 115444194 115460694 - Pkd1l2 protein_coding retained_intron MGP_BALBcJ_T0090604.1 MGP_BALBcJ_G0034144.1 mouse_genomes_project 8 115460148 115465258 - Pkd1l2 protein_coding retained_intron MGP_BALBcJ_T0091026.1 MGP_BALBcJ_G0034264.1 mouse_genomes_project 8 124573211 124609114 + MGP_BALBcJ_P0091026 Kcnk1 protein_coding protein_coding MGP_BALBcJ_T0090445.1 MGP_BALBcJ_G0034094.1 mouse_genomes_project 8 108377823 108379814 + MGP_BALBcJ_P0090445 Gm21964 protein_coding protein_coding MGP_BALBcJ_T0088782.1 MGP_BALBcJ_G0033557.1 mouse_genomes_project 8 43406423 43446383 + MGP_BALBcJ_P0088782 Pdlim3 protein_coding protein_coding MGP_BALBcJ_T0090838.1 MGP_BALBcJ_G0034209.1 mouse_genomes_project 8 121149557 121152823 - MGP_BALBcJ_P0090838 Pabpn1l protein_coding protein_coding MGP_BALBcJ_T0090358.1 MGP_BALBcJ_G0034062.1 mouse_genomes_project 8 105096911 105104556 - MGP_BALBcJ_P0090358 protein_coding protein_coding MGP_BALBcJ_T0090359.1 MGP_BALBcJ_G0034062.1 mouse_genomes_project 8 105097010 105104480 - MGP_BALBcJ_P0090359 protein_coding protein_coding MGP_BALBcJ_T0090360.1 MGP_BALBcJ_G0034062.1 mouse_genomes_project 8 105097087 105104566 - MGP_BALBcJ_P0090360 protein_coding protein_coding MGP_BALBcJ_T0005385.1 MGP_BALBcJ_G0004566.1 mouse_genomes_project 8 123789377 123792294 - Gm16237 antisense antisense MGP_BALBcJ_T0088160.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9695122 9753135 - MGP_BALBcJ_P0088160 Tubgcp3 protein_coding protein_coding MGP_BALBcJ_T0088161.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9695122 9752986 - MGP_BALBcJ_P0088161 Tubgcp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088162.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9695124 9718932 - Tubgcp3 protein_coding retained_intron MGP_BALBcJ_T0088163.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9696012 9718905 - Tubgcp3 protein_coding retained_intron MGP_BALBcJ_T0088164.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9702855 9738508 - Tubgcp3 protein_coding retained_intron MGP_BALBcJ_T0088165.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9711471 9753010 - Tubgcp3 protein_coding retained_intron MGP_BALBcJ_T0088166.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9730860 9736790 - Tubgcp3 protein_coding retained_intron MGP_BALBcJ_T0088167.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9735156 9738522 - MGP_BALBcJ_P0088167 Tubgcp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088168.1 MGP_BALBcJ_G0033346.1 mouse_genomes_project 8 9735191 9752846 - MGP_BALBcJ_P0088168 Tubgcp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009142.1 MGP_BALBcJ_G0007344.1 mouse_genomes_project 8 90123510 90123949 - lincRNA lincRNA MGP_BALBcJ_T0090675.1 MGP_BALBcJ_G0034171.1 mouse_genomes_project 8 118565329 118587465 - MGP_BALBcJ_P0090675 Zdhhc7 protein_coding protein_coding MGP_BALBcJ_T0090676.1 MGP_BALBcJ_G0034171.1 mouse_genomes_project 8 118566637 118573600 - Zdhhc7 protein_coding retained_intron MGP_BALBcJ_T0090677.1 MGP_BALBcJ_G0034171.1 mouse_genomes_project 8 118571986 118574840 - Zdhhc7 protein_coding retained_intron MGP_BALBcJ_T0090678.1 MGP_BALBcJ_G0034171.1 mouse_genomes_project 8 118572176 118575033 - Zdhhc7 protein_coding retained_intron MGP_BALBcJ_T0090679.1 MGP_BALBcJ_G0034171.1 mouse_genomes_project 8 118578957 118587055 - Zdhhc7 protein_coding processed_transcript MGP_BALBcJ_T0088748.1 MGP_BALBcJ_G0033553.1 mouse_genomes_project 8 42777769 42818248 - MGP_BALBcJ_P0088748 Cyp4v3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088749.1 MGP_BALBcJ_G0033553.1 mouse_genomes_project 8 42814727 42840464 - MGP_BALBcJ_P0088749 Cyp4v3 protein_coding protein_coding MGP_BALBcJ_T0088706.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38421651 38568895 - MGP_BALBcJ_P0088706 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088707.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38421655 38490522 - MGP_BALBcJ_P0088707 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088708.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38421655 38549983 - MGP_BALBcJ_P0088708 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088709.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38421789 38477273 - MGP_BALBcJ_P0088709 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088710.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38429481 38430917 - Mtus1 protein_coding retained_intron MGP_BALBcJ_T0088711.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38431387 38448415 - Mtus1 protein_coding processed_transcript MGP_BALBcJ_T0088712.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38431544 38448429 - MGP_BALBcJ_P0088712 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088713.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38433063 38447980 - MGP_BALBcJ_P0088713 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088714.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38446000 38471516 - Mtus1 protein_coding processed_transcript MGP_BALBcJ_T0088715.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38450624 38490511 - Mtus1 protein_coding processed_transcript MGP_BALBcJ_T0088716.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38451185 38454518 - Mtus1 protein_coding retained_intron MGP_BALBcJ_T0088717.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38485765 38519286 - MGP_BALBcJ_P0088717 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088718.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38485880 38568895 - MGP_BALBcJ_P0088718 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0088719.1 MGP_BALBcJ_G0033537.1 mouse_genomes_project 8 38521072 38568887 - MGP_BALBcJ_P0088719 Mtus1 protein_coding protein_coding MGP_BALBcJ_T0015924.1 MGP_BALBcJ_G0014021.1 mouse_genomes_project 8 16329780 16330618 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090643.1 MGP_BALBcJ_G0034159.1 mouse_genomes_project 8 118037708 118051987 - MGP_BALBcJ_P0090643 Hsdl1 protein_coding protein_coding MGP_BALBcJ_T0101425.1 MGP_BALBcJ_G0039461.1 mouse_genomes_project 8 109206585 109206733 + Gm26132 snoRNA snoRNA MGP_BALBcJ_T0089285.1 MGP_BALBcJ_G0033704.1 mouse_genomes_project 8 68403276 68407169 - MGP_BALBcJ_P0089285 Ifi30 protein_coding protein_coding MGP_BALBcJ_T0089264.1 MGP_BALBcJ_G0033692.1 mouse_genomes_project 8 68226487 68229296 + MGP_BALBcJ_P0089264 Isyna1 protein_coding protein_coding MGP_BALBcJ_T0089664.1 MGP_BALBcJ_G0033831.1 mouse_genomes_project 8 81774813 81781314 + MGP_BALBcJ_P0089664 Podnl1 protein_coding protein_coding MGP_BALBcJ_T0089665.1 MGP_BALBcJ_G0033831.1 mouse_genomes_project 8 81776643 81781303 + Podnl1 protein_coding retained_intron MGP_BALBcJ_T0089134.1 MGP_BALBcJ_G0033664.1 mouse_genomes_project 8 67625929 67652528 - MGP_BALBcJ_P0089134 Mau2 protein_coding protein_coding MGP_BALBcJ_T0089135.1 MGP_BALBcJ_G0033664.1 mouse_genomes_project 8 67625929 67652577 - MGP_BALBcJ_P0089135 Mau2 protein_coding protein_coding MGP_BALBcJ_T0089011.1 MGP_BALBcJ_G0033626.1 mouse_genomes_project 8 62580687 62586944 - MGP_BALBcJ_P0089011 protein_coding protein_coding MGP_BALBcJ_T0089012.1 MGP_BALBcJ_G0033626.1 mouse_genomes_project 8 62582628 62603708 - protein_coding processed_transcript MGP_BALBcJ_T0089013.1 MGP_BALBcJ_G0033626.1 mouse_genomes_project 8 62595077 62603784 - MGP_BALBcJ_P0089013 protein_coding protein_coding MGP_BALBcJ_T0089014.1 MGP_BALBcJ_G0033626.1 mouse_genomes_project 8 62595077 62603941 - MGP_BALBcJ_P0089014 protein_coding protein_coding MGP_BALBcJ_T0002339.1 MGP_BALBcJ_G0002249.1 mouse_genomes_project 8 120469075 120469873 - TEC TEC MGP_BALBcJ_T0090126.1 MGP_BALBcJ_G0033967.1 mouse_genomes_project 8 93488175 93489042 + Setd6 protein_coding processed_transcript MGP_BALBcJ_T0090127.1 MGP_BALBcJ_G0033967.1 mouse_genomes_project 8 93488192 93491255 + MGP_BALBcJ_P0090127 Setd6 protein_coding protein_coding MGP_BALBcJ_T0090128.1 MGP_BALBcJ_G0033967.1 mouse_genomes_project 8 93488422 93489498 + Setd6 protein_coding processed_transcript MGP_BALBcJ_T0090129.1 MGP_BALBcJ_G0033967.1 mouse_genomes_project 8 93488871 93490764 + Setd6 protein_coding processed_transcript MGP_BALBcJ_T0090130.1 MGP_BALBcJ_G0033967.1 mouse_genomes_project 8 93488880 93490311 + Setd6 protein_coding processed_transcript MGP_BALBcJ_T0090131.1 MGP_BALBcJ_G0033967.1 mouse_genomes_project 8 93489269 93491116 + Setd6 protein_coding processed_transcript MGP_BALBcJ_T0088143.1 MGP_BALBcJ_G0033339.1 mouse_genomes_project 8 8721647 8745026 - MGP_BALBcJ_P0088143 1700016D06Rik protein_coding protein_coding MGP_BALBcJ_T0088144.1 MGP_BALBcJ_G0033339.1 mouse_genomes_project 8 8722201 8727401 - 1700016D06Rik protein_coding processed_transcript MGP_BALBcJ_T0088145.1 MGP_BALBcJ_G0033339.1 mouse_genomes_project 8 8722202 8768055 - MGP_BALBcJ_P0088145 1700016D06Rik protein_coding protein_coding MGP_BALBcJ_T0088146.1 MGP_BALBcJ_G0033339.1 mouse_genomes_project 8 8722203 8730095 - MGP_BALBcJ_P0088146 1700016D06Rik protein_coding protein_coding MGP_BALBcJ_T0088379.1 MGP_BALBcJ_G0033426.1 mouse_genomes_project 8 19691930 19714961 - MGP_BALBcJ_P0088379 Slc25a15 protein_coding protein_coding MGP_BALBcJ_T0090295.1 MGP_BALBcJ_G0034037.1 mouse_genomes_project 8 104040913 104060273 + MGP_BALBcJ_P0090295 Nutf2-ps1 protein_coding protein_coding MGP_BALBcJ_T0010982.1 MGP_BALBcJ_G0009107.1 mouse_genomes_project 8 100731808 100731903 - Gm26301 miRNA miRNA MGP_BALBcJ_T0088670.1 MGP_BALBcJ_G0033527.1 mouse_genomes_project 8 37712730 37784561 + MGP_BALBcJ_P0088670 Micu3 protein_coding protein_coding MGP_BALBcJ_T0088671.1 MGP_BALBcJ_G0033527.1 mouse_genomes_project 8 37713430 37785225 + MGP_BALBcJ_P0088671 Micu3 protein_coding protein_coding MGP_BALBcJ_T0088672.1 MGP_BALBcJ_G0033527.1 mouse_genomes_project 8 37763219 37775502 + Micu3 protein_coding retained_intron MGP_BALBcJ_T0090237.1 MGP_BALBcJ_G0034011.1 mouse_genomes_project 8 103451916 103460123 + MGP_BALBcJ_P0090237 E2f4 protein_coding protein_coding MGP_BALBcJ_T0088864.1 MGP_BALBcJ_G0033583.1 mouse_genomes_project 8 45362625 45526951 - MGP_BALBcJ_P0088864 Wwc2 protein_coding protein_coding MGP_BALBcJ_T0005373.1 MGP_BALBcJ_G0004555.1 mouse_genomes_project 8 114109046 114111204 + Gm15655 antisense antisense MGP_BALBcJ_T0009086.1 MGP_BALBcJ_G0007306.1 mouse_genomes_project 8 58833896 58841432 - 1700001D01Rik lincRNA lincRNA MGP_BALBcJ_T0090771.1 MGP_BALBcJ_G0034191.1 mouse_genomes_project 8 120402403 120430019 - MGP_BALBcJ_P0090771 Slc7a5 protein_coding protein_coding MGP_BALBcJ_T0090772.1 MGP_BALBcJ_G0034191.1 mouse_genomes_project 8 120404043 120405156 - Slc7a5 protein_coding retained_intron MGP_BALBcJ_T0090773.1 MGP_BALBcJ_G0034191.1 mouse_genomes_project 8 120409647 120417774 - Slc7a5 protein_coding processed_transcript MGP_BALBcJ_T0088478.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22860082 22902835 + MGP_BALBcJ_P0088478 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088479.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865202 22923016 + MGP_BALBcJ_P0088479 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088480.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865202 22923016 + MGP_BALBcJ_P0088480 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088481.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865222 22923016 + MGP_BALBcJ_P0088481 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088482.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865225 22922082 + MGP_BALBcJ_P0088482 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088483.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865250 22921571 + MGP_BALBcJ_P0088483 Fgfr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0088484.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865325 22902925 + Fgfr1 protein_coding processed_transcript MGP_BALBcJ_T0088485.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22865749 22922080 + MGP_BALBcJ_P0088485 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088486.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22866269 22902996 + MGP_BALBcJ_P0088486 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088487.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22879598 22921878 + MGP_BALBcJ_P0088487 Fgfr1 protein_coding protein_coding MGP_BALBcJ_T0088488.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22902883 22917386 + Fgfr1 protein_coding processed_transcript MGP_BALBcJ_T0088489.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22905340 22910933 + Fgfr1 protein_coding retained_intron MGP_BALBcJ_T0088490.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22910623 22922086 + Fgfr1 protein_coding retained_intron MGP_BALBcJ_T0088491.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22914068 22922085 + Fgfr1 protein_coding retained_intron MGP_BALBcJ_T0088492.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22916665 22919696 + Fgfr1 protein_coding retained_intron MGP_BALBcJ_T0088493.1 MGP_BALBcJ_G0033457.1 mouse_genomes_project 8 22916902 22919758 + Fgfr1 protein_coding retained_intron MGP_BALBcJ_T0089276.1 MGP_BALBcJ_G0033701.1 mouse_genomes_project 8 68361681 68386827 + MGP_BALBcJ_P0089276 Pde4c protein_coding protein_coding MGP_BALBcJ_T0089277.1 MGP_BALBcJ_G0033701.1 mouse_genomes_project 8 68362025 68391958 + MGP_BALBcJ_P0089277 Pde4c protein_coding protein_coding MGP_BALBcJ_T0089278.1 MGP_BALBcJ_G0033701.1 mouse_genomes_project 8 68362026 68391943 + MGP_BALBcJ_P0089278 Pde4c protein_coding protein_coding MGP_BALBcJ_T0089279.1 MGP_BALBcJ_G0033701.1 mouse_genomes_project 8 68368142 68386674 + Pde4c protein_coding processed_transcript MGP_BALBcJ_T0089280.1 MGP_BALBcJ_G0033701.1 mouse_genomes_project 8 68383859 68391245 + Pde4c protein_coding retained_intron MGP_BALBcJ_T0089281.1 MGP_BALBcJ_G0033701.1 mouse_genomes_project 8 68388663 68391585 + Pde4c protein_coding retained_intron MGP_BALBcJ_T0090520.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109847280 109936354 + MGP_BALBcJ_P0090520 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090521.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109847919 109936664 + MGP_BALBcJ_P0090521 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090522.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109847919 109936664 + MGP_BALBcJ_P0090522 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090523.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109848121 109934412 + MGP_BALBcJ_P0090523 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090524.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109848399 109933586 + MGP_BALBcJ_P0090524 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090525.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109848549 109932266 + MGP_BALBcJ_P0090525 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090526.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109848742 109932549 + MGP_BALBcJ_P0090526 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090527.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109848766 109933114 + MGP_BALBcJ_P0090527 Znrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090528.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109849621 109933184 + MGP_BALBcJ_P0090528 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090529.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109849621 109936664 + MGP_BALBcJ_P0090529 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090530.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109849743 109923538 + Znrf1 protein_coding processed_transcript MGP_BALBcJ_T0090531.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109852529 109932277 + MGP_BALBcJ_P0090531 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0090532.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109872950 109920948 + Znrf1 protein_coding processed_transcript MGP_BALBcJ_T0090533.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109920899 109933575 + MGP_BALBcJ_P0090533 Znrf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090534.1 MGP_BALBcJ_G0034115.1 mouse_genomes_project 8 109923469 109932388 + MGP_BALBcJ_P0090534 Znrf1 protein_coding protein_coding MGP_BALBcJ_T0005315.1 MGP_BALBcJ_G0004507.1 mouse_genomes_project 8 12084827 12088637 - 5830468F06Rik antisense antisense MGP_BALBcJ_T0088401.1 MGP_BALBcJ_G0033434.1 mouse_genomes_project 8 20069093 20098429 + MGP_BALBcJ_P0088401 Plat protein_coding protein_coding MGP_BALBcJ_T0090605.1 MGP_BALBcJ_G0034145.1 mouse_genomes_project 8 115533405 115571874 + MGP_BALBcJ_P0090605 Bco1 protein_coding protein_coding MGP_BALBcJ_T0090606.1 MGP_BALBcJ_G0034145.1 mouse_genomes_project 8 115533416 115569375 + MGP_BALBcJ_P0090606 Bco1 protein_coding protein_coding MGP_BALBcJ_T0090607.1 MGP_BALBcJ_G0034145.1 mouse_genomes_project 8 115533549 115571473 + MGP_BALBcJ_P0090607 Bco1 protein_coding protein_coding MGP_BALBcJ_T0005310.1 MGP_BALBcJ_G0004504.1 mouse_genomes_project 8 9983968 10000442 - Gm15351 antisense antisense MGP_BALBcJ_T0005311.1 MGP_BALBcJ_G0004504.1 mouse_genomes_project 8 9997348 10000581 - Gm15351 antisense antisense MGP_BALBcJ_T0005312.1 MGP_BALBcJ_G0004504.1 mouse_genomes_project 8 9999404 10000296 - Gm15351 antisense antisense MGP_BALBcJ_T0018435.1 MGP_BALBcJ_G0015655.1 mouse_genomes_project 8 69824955 69838126 - Gm16091 processed_transcript processed_transcript MGP_BALBcJ_T0090270.1 MGP_BALBcJ_G0034024.1 mouse_genomes_project 8 103737611 103814110 - MGP_BALBcJ_P0090270 Agrp protein_coding protein_coding MGP_BALBcJ_T0090271.1 MGP_BALBcJ_G0034024.1 mouse_genomes_project 8 103737611 103739212 - MGP_BALBcJ_P0090271 Agrp protein_coding protein_coding MGP_BALBcJ_T0090272.1 MGP_BALBcJ_G0034024.1 mouse_genomes_project 8 103737711 103756435 - MGP_BALBcJ_P0090272 Agrp protein_coding protein_coding MGP_BALBcJ_T0010974.1 MGP_BALBcJ_G0009099.1 mouse_genomes_project 8 84269466 84269591 + Gm44348 miRNA miRNA MGP_BALBcJ_T0100121.1 MGP_BALBcJ_G0038157.1 mouse_genomes_project 8 43373527 43373653 - Gm25309 snRNA snRNA MGP_BALBcJ_T0009173.1 MGP_BALBcJ_G0007368.1 mouse_genomes_project 8 119951017 119951427 + Gm26784 lincRNA lincRNA MGP_BALBcJ_T0005330.1 MGP_BALBcJ_G0004518.1 mouse_genomes_project 8 42517368 42522538 - Gm2366 antisense antisense MGP_BALBcJ_T0011010.1 MGP_BALBcJ_G0009135.1 mouse_genomes_project 8 126899005 126899083 - Mir21c miRNA miRNA MGP_BALBcJ_T0010980.1 MGP_BALBcJ_G0009105.1 mouse_genomes_project 8 93525730 93525794 - Mir7073 miRNA miRNA MGP_BALBcJ_T0090348.1 MGP_BALBcJ_G0034055.1 mouse_genomes_project 8 104444658 104530162 - MGP_BALBcJ_P0090348 Smpd3 protein_coding protein_coding MGP_BALBcJ_T0011693.1 MGP_BALBcJ_G0009818.1 mouse_genomes_project 8 8763542 8763786 - Gm27854 misc_RNA misc_RNA MGP_BALBcJ_T0088378.1 MGP_BALBcJ_G0033425.1 mouse_genomes_project 8 19600397 19687795 + MGP_BALBcJ_P0088378 Tpte protein_coding protein_coding MGP_BALBcJ_T0088860.1 MGP_BALBcJ_G0033579.1 mouse_genomes_project 8 45240412 45245000 - MGP_BALBcJ_P0088860 Cdkn2aip protein_coding protein_coding MGP_BALBcJ_T0089466.1 MGP_BALBcJ_G0033762.1 mouse_genomes_project 8 70244488 70250179 - MGP_BALBcJ_P0089466 Smim7 protein_coding protein_coding MGP_BALBcJ_T0089467.1 MGP_BALBcJ_G0033762.1 mouse_genomes_project 8 70246791 70250140 - MGP_BALBcJ_P0089467 Smim7 protein_coding protein_coding MGP_BALBcJ_T0089468.1 MGP_BALBcJ_G0033762.1 mouse_genomes_project 8 70249678 70250153 - Smim7 protein_coding retained_intron MGP_BALBcJ_T0002337.1 MGP_BALBcJ_G0002247.1 mouse_genomes_project 8 119185061 119185928 + TEC TEC MGP_BALBcJ_T0090205.1 MGP_BALBcJ_G0034001.1 mouse_genomes_project 8 103270516 103300121 + MGP_BALBcJ_P0090205 Ces4a protein_coding protein_coding MGP_BALBcJ_T0088578.1 MGP_BALBcJ_G0033490.1 mouse_genomes_project 8 28525811 28539480 + MGP_BALBcJ_P0088578 Tti2 protein_coding protein_coding MGP_BALBcJ_T0090626.1 MGP_BALBcJ_G0034154.1 mouse_genomes_project 8 117868404 117884644 + MGP_BALBcJ_P0090626 Mlycd protein_coding protein_coding MGP_BALBcJ_T0090627.1 MGP_BALBcJ_G0034154.1 mouse_genomes_project 8 117868424 117884629 + Mlycd protein_coding retained_intron MGP_BALBcJ_T0088180.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 9958840 9965181 + MGP_BALBcJ_P0088180 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088181.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 9958861 10104892 + MGP_BALBcJ_P0088181 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088182.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 9958982 9974931 + Mcf2l protein_coding processed_transcript MGP_BALBcJ_T0088183.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10000078 10106744 + MGP_BALBcJ_P0088183 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088184.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10000733 10077639 + Mcf2l protein_coding processed_transcript MGP_BALBcJ_T0088185.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10000797 10105148 + MGP_BALBcJ_P0088185 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088186.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10000798 10106345 + MGP_BALBcJ_P0088186 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088187.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10011461 10104016 + MGP_BALBcJ_P0088187 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088188.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10032946 10073630 + Mcf2l protein_coding retained_intron MGP_BALBcJ_T0088189.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10032980 10099868 + MGP_BALBcJ_P0088189 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088190.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10034443 10105114 + MGP_BALBcJ_P0088190 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088191.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10034511 10106340 + MGP_BALBcJ_P0088191 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088192.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10069753 10103307 + MGP_BALBcJ_P0088192 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088193.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10069758 10097385 + MGP_BALBcJ_P0088193 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088194.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10069773 10106344 + MGP_BALBcJ_P0088194 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088195.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10097332 10106366 + MGP_BALBcJ_P0088195 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088196.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10097348 10103933 + MGP_BALBcJ_P0088196 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088197.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10097656 10103278 + MGP_BALBcJ_P0088197 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088198.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10098900 10101204 + Mcf2l protein_coding retained_intron MGP_BALBcJ_T0088199.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10099399 10104838 + MGP_BALBcJ_P0088199 Mcf2l protein_coding protein_coding MGP_BALBcJ_T0088200.1 MGP_BALBcJ_G0033348.1 mouse_genomes_project 8 10103014 10104846 + Mcf2l protein_coding retained_intron MGP_BALBcJ_T0090814.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002239 121008871 + MGP_BALBcJ_P0090814 Ctu2 protein_coding protein_coding MGP_BALBcJ_T0090815.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002305 121009917 + MGP_BALBcJ_P0090815 Ctu2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090816.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002309 121007520 + Ctu2 protein_coding retained_intron MGP_BALBcJ_T0090817.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002309 121004334 + MGP_BALBcJ_P0090817 Ctu2 protein_coding protein_coding MGP_BALBcJ_T0090818.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002316 121005465 + MGP_BALBcJ_P0090818 Ctu2 protein_coding protein_coding MGP_BALBcJ_T0090819.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002339 121005070 + Ctu2 protein_coding retained_intron MGP_BALBcJ_T0090820.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121002813 121004366 + Ctu2 protein_coding retained_intron MGP_BALBcJ_T0090821.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121006700 121007519 + Ctu2 protein_coding retained_intron MGP_BALBcJ_T0090822.1 MGP_BALBcJ_G0034202.1 mouse_genomes_project 8 121006735 121007523 + MGP_BALBcJ_P0090822 Ctu2 protein_coding protein_coding MGP_BALBcJ_T0015989.1 MGP_BALBcJ_G0014086.1 mouse_genomes_project 8 125059413 125059833 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088518.1 MGP_BALBcJ_G0033464.1 mouse_genomes_project 8 23136697 23154962 + MGP_BALBcJ_P0088518 Lsm1 protein_coding protein_coding MGP_BALBcJ_T0101421.1 MGP_BALBcJ_G0039457.1 mouse_genomes_project 8 104170905 104171036 - Gm22972 snoRNA snoRNA MGP_BALBcJ_T0090154.1 MGP_BALBcJ_G0033976.1 mouse_genomes_project 8 102345649 102368825 - MGP_BALBcJ_P0090154 Tk2 protein_coding protein_coding MGP_BALBcJ_T0088744.1 MGP_BALBcJ_G0033550.1 mouse_genomes_project 8 42569475 42591211 + MGP_BALBcJ_P0088744 Mtnr1a protein_coding protein_coding MGP_BALBcJ_T0088745.1 MGP_BALBcJ_G0033550.1 mouse_genomes_project 8 42569712 42590211 + MGP_BALBcJ_P0088745 Mtnr1a protein_coding protein_coding MGP_BALBcJ_T0088318.1 MGP_BALBcJ_G0033386.1 mouse_genomes_project 8 15871199 15916643 + MGP_BALBcJ_P0088318 Agpat5 protein_coding protein_coding MGP_BALBcJ_T0088319.1 MGP_BALBcJ_G0033386.1 mouse_genomes_project 8 15871201 15908694 + MGP_BALBcJ_P0088319 Agpat5 protein_coding protein_coding MGP_BALBcJ_T0090792.1 MGP_BALBcJ_G0034194.1 mouse_genomes_project 8 120804274 120860945 + MGP_BALBcJ_P0090792 Zfpm1 protein_coding protein_coding MGP_BALBcJ_T0090793.1 MGP_BALBcJ_G0034194.1 mouse_genomes_project 8 120831333 120847705 + Zfpm1 protein_coding processed_transcript MGP_BALBcJ_T0090794.1 MGP_BALBcJ_G0034194.1 mouse_genomes_project 8 120857436 120858723 + Zfpm1 protein_coding processed_transcript MGP_BALBcJ_T0090795.1 MGP_BALBcJ_G0034194.1 mouse_genomes_project 8 120857524 120859455 + MGP_BALBcJ_P0090795 Zfpm1 protein_coding protein_coding MGP_BALBcJ_T0101404.1 MGP_BALBcJ_G0039440.1 mouse_genomes_project 8 65564573 65564704 + Gm22018 snoRNA snoRNA MGP_BALBcJ_T0088633.1 MGP_BALBcJ_G0033508.1 mouse_genomes_project 8 31475337 31486833 - MGP_BALBcJ_P0088633 Leprotl1 protein_coding protein_coding MGP_BALBcJ_T0009104.1 MGP_BALBcJ_G0007321.1 mouse_genomes_project 8 81858928 81859615 + Gm26532 lincRNA lincRNA MGP_BALBcJ_T0015952.1 MGP_BALBcJ_G0014049.1 mouse_genomes_project 8 63355651 63355936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090112.1 MGP_BALBcJ_G0033961.1 mouse_genomes_project 8 93190218 93205451 - MGP_BALBcJ_P0090112 Cfap20 protein_coding protein_coding MGP_BALBcJ_T0090655.1 MGP_BALBcJ_G0034166.1 mouse_genomes_project 8 118241943 118260187 - MGP_BALBcJ_P0090655 Tldc1 protein_coding protein_coding MGP_BALBcJ_T0100157.1 MGP_BALBcJ_G0038193.1 mouse_genomes_project 8 120354954 120355061 + Gm24283 snRNA snRNA MGP_BALBcJ_T0088403.1 MGP_BALBcJ_G0033436.1 mouse_genomes_project 8 20175894 20260666 + MGP_BALBcJ_P0088403 Kat6a protein_coding protein_coding MGP_BALBcJ_T0088404.1 MGP_BALBcJ_G0033436.1 mouse_genomes_project 8 20175908 20260666 + MGP_BALBcJ_P0088404 Kat6a protein_coding protein_coding MGP_BALBcJ_T0088405.1 MGP_BALBcJ_G0033436.1 mouse_genomes_project 8 20231275 20241094 + Kat6a protein_coding processed_transcript MGP_BALBcJ_T0089009.1 MGP_BALBcJ_G0033624.1 mouse_genomes_project 8 62551194 62557189 - MGP_BALBcJ_P0089009 Trim75 protein_coding protein_coding MGP_BALBcJ_T0101396.1 MGP_BALBcJ_G0039432.1 mouse_genomes_project 8 55187563 55187677 + Gm25379 snoRNA snoRNA MGP_BALBcJ_T0088381.1 MGP_BALBcJ_G0033428.1 mouse_genomes_project 8 19780118 19794384 - MGP_BALBcJ_P0088381 Smim19 protein_coding protein_coding MGP_BALBcJ_T0088382.1 MGP_BALBcJ_G0033428.1 mouse_genomes_project 8 19780118 19794384 - MGP_BALBcJ_P0088382 Smim19 protein_coding protein_coding MGP_BALBcJ_T0101429.1 MGP_BALBcJ_G0039465.1 mouse_genomes_project 8 117196400 117196488 + Gm22999 snoRNA snoRNA MGP_BALBcJ_T0088527.1 MGP_BALBcJ_G0033467.1 mouse_genomes_project 8 23200431 23288046 + MGP_BALBcJ_P0088527 Kcnu1 protein_coding protein_coding MGP_BALBcJ_T0088528.1 MGP_BALBcJ_G0033467.1 mouse_genomes_project 8 23260799 23288047 + MGP_BALBcJ_P0088528 Kcnu1 protein_coding protein_coding MGP_BALBcJ_T0088529.1 MGP_BALBcJ_G0033467.1 mouse_genomes_project 8 23260811 23270465 + MGP_BALBcJ_P0088529 Kcnu1 protein_coding protein_coding MGP_BALBcJ_T0088958.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58551253 58683516 + MGP_BALBcJ_P0088958 Nek1 protein_coding protein_coding MGP_BALBcJ_T0088959.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58551253 58683523 + MGP_BALBcJ_P0088959 Nek1 protein_coding protein_coding MGP_BALBcJ_T0088960.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58551258 58596669 + Nek1 protein_coding retained_intron MGP_BALBcJ_T0088961.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58551297 58658715 + Nek1 protein_coding retained_intron MGP_BALBcJ_T0088962.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58551299 58582768 + Nek1 protein_coding retained_intron MGP_BALBcJ_T0088963.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58551299 58582231 + Nek1 protein_coding retained_intron MGP_BALBcJ_T0088964.1 MGP_BALBcJ_G0033611.1 mouse_genomes_project 8 58601960 58638043 + MGP_BALBcJ_P0088964 Nek1 protein_coding protein_coding MGP_BALBcJ_T0015942.1 MGP_BALBcJ_G0014039.1 mouse_genomes_project 8 35529659 35532483 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089791.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649022 82654208 + MGP_BALBcJ_P0089791 Prdx2 protein_coding protein_coding MGP_BALBcJ_T0089792.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649046 82654208 + MGP_BALBcJ_P0089792 Prdx2 protein_coding protein_coding MGP_BALBcJ_T0089793.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649129 82651548 + Prdx2 protein_coding retained_intron MGP_BALBcJ_T0089794.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649129 82650563 + Prdx2 protein_coding retained_intron MGP_BALBcJ_T0089795.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649202 82654208 + MGP_BALBcJ_P0089795 Prdx2 protein_coding protein_coding MGP_BALBcJ_T0089796.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649292 82651066 + MGP_BALBcJ_P0089796 Prdx2 protein_coding protein_coding MGP_BALBcJ_T0089797.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82649674 82654033 + MGP_BALBcJ_P0089797 Prdx2 protein_coding protein_coding MGP_BALBcJ_T0089798.1 MGP_BALBcJ_G0033859.1 mouse_genomes_project 8 82650893 82653689 + Prdx2 protein_coding retained_intron MGP_BALBcJ_T0005325.1 MGP_BALBcJ_G0004514.1 mouse_genomes_project 8 24417605 24418271 - Proscos antisense antisense MGP_BALBcJ_T0005326.1 MGP_BALBcJ_G0004514.1 mouse_genomes_project 8 24417610 24418226 - Proscos antisense antisense MGP_BALBcJ_T0089399.1 MGP_BALBcJ_G0033739.1 mouse_genomes_project 8 69334472 69352950 + MGP_BALBcJ_P0089399 Jak3 protein_coding protein_coding MGP_BALBcJ_T0089400.1 MGP_BALBcJ_G0033739.1 mouse_genomes_project 8 69334472 69350930 + MGP_BALBcJ_P0089400 Jak3 protein_coding protein_coding MGP_BALBcJ_T0089401.1 MGP_BALBcJ_G0033739.1 mouse_genomes_project 8 69334728 69342698 + Jak3 protein_coding retained_intron MGP_BALBcJ_T0089402.1 MGP_BALBcJ_G0033739.1 mouse_genomes_project 8 69335725 69350932 + MGP_BALBcJ_P0089402 Jak3 protein_coding protein_coding MGP_BALBcJ_T0089403.1 MGP_BALBcJ_G0033739.1 mouse_genomes_project 8 69336509 69352599 + Jak3 protein_coding retained_intron MGP_BALBcJ_T0089598.1 MGP_BALBcJ_G0033808.1 mouse_genomes_project 8 81173338 81174434 + MGP_BALBcJ_P0089598 Olfr370 protein_coding protein_coding MGP_BALBcJ_T0088729.1 MGP_BALBcJ_G0033541.1 mouse_genomes_project 8 38825623 38846461 - MGP_BALBcJ_P0088729 Frg1 protein_coding protein_coding MGP_BALBcJ_T0088334.1 MGP_BALBcJ_G0033396.1 mouse_genomes_project 8 16217030 16217886 + MGP_BALBcJ_P0088334 Defb14 protein_coding protein_coding MGP_BALBcJ_T0089696.1 MGP_BALBcJ_G0033841.1 mouse_genomes_project 8 82332654 82352612 - MGP_BALBcJ_P0089696 Nacc1 protein_coding protein_coding MGP_BALBcJ_T0090155.1 MGP_BALBcJ_G0033977.1 mouse_genomes_project 8 102371169 102383615 + MGP_BALBcJ_P0090155 Cklf protein_coding protein_coding MGP_BALBcJ_T0010978.1 MGP_BALBcJ_G0009103.1 mouse_genomes_project 8 92102409 92102480 + Mir138-2 miRNA miRNA MGP_BALBcJ_T0088141.1 MGP_BALBcJ_G0033338.1 mouse_genomes_project 8 8677805 8701973 - MGP_BALBcJ_P0088141 Ankrd10 protein_coding protein_coding MGP_BALBcJ_T0088142.1 MGP_BALBcJ_G0033338.1 mouse_genomes_project 8 8680373 8701973 - MGP_BALBcJ_P0088142 Ankrd10 protein_coding protein_coding MGP_BALBcJ_T0090589.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115331178 115337018 - Cmc2 protein_coding retained_intron MGP_BALBcJ_T0090590.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115331178 115357406 - MGP_BALBcJ_P0090590 Cmc2 protein_coding protein_coding MGP_BALBcJ_T0090591.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115331772 115357373 - MGP_BALBcJ_P0090591 Cmc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090592.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115332011 115357398 - MGP_BALBcJ_P0090592 Cmc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090593.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115332026 115357390 - MGP_BALBcJ_P0090593 Cmc2 protein_coding protein_coding MGP_BALBcJ_T0090594.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115332108 115357397 - Cmc2 protein_coding processed_transcript MGP_BALBcJ_T0090595.1 MGP_BALBcJ_G0034139.1 mouse_genomes_project 8 115332125 115357316 - MGP_BALBcJ_P0090595 Cmc2 protein_coding protein_coding MGP_BALBcJ_T0009079.1 MGP_BALBcJ_G0007299.1 mouse_genomes_project 8 43094151 43104300 - lincRNA lincRNA MGP_BALBcJ_T0090483.1 MGP_BALBcJ_G0034105.1 mouse_genomes_project 8 109259570 109283134 - MGP_BALBcJ_P0090483 Ddx19a protein_coding protein_coding MGP_BALBcJ_T0090484.1 MGP_BALBcJ_G0034105.1 mouse_genomes_project 8 109260597 109283057 - MGP_BALBcJ_P0090484 Ddx19a protein_coding unknown_likely_coding MGP_BALBcJ_T0090485.1 MGP_BALBcJ_G0034105.1 mouse_genomes_project 8 109263204 109266762 - Ddx19a protein_coding retained_intron MGP_BALBcJ_T0090486.1 MGP_BALBcJ_G0034105.1 mouse_genomes_project 8 109266601 109283104 - Ddx19a protein_coding retained_intron MGP_BALBcJ_T0015974.1 MGP_BALBcJ_G0014071.1 mouse_genomes_project 8 86922372 86922987 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005357.1 MGP_BALBcJ_G0004542.1 mouse_genomes_project 8 102778574 102790522 + 1700082M22Rik antisense antisense MGP_BALBcJ_T0005358.1 MGP_BALBcJ_G0004542.1 mouse_genomes_project 8 102784559 102790382 + 1700082M22Rik antisense antisense MGP_BALBcJ_T0090809.1 MGP_BALBcJ_G0034199.1 mouse_genomes_project 8 120959031 120969532 - MGP_BALBcJ_P0090809 Mvd protein_coding protein_coding MGP_BALBcJ_T0089659.1 MGP_BALBcJ_G0033827.1 mouse_genomes_project 8 81713866 81715445 - MGP_BALBcJ_P0089659 Gm10643 protein_coding protein_coding MGP_BALBcJ_T0088892.1 MGP_BALBcJ_G0033591.1 mouse_genomes_project 8 52160830 52201856 + MGP_BALBcJ_P0088892 Asb5 protein_coding protein_coding MGP_BALBcJ_T0091063.1 MGP_BALBcJ_G0034273.1 mouse_genomes_project 8 127311819 127359167 + MGP_BALBcJ_P0091063 Itgb1 protein_coding protein_coding MGP_BALBcJ_T0091064.1 MGP_BALBcJ_G0034273.1 mouse_genomes_project 8 127311922 127358584 + MGP_BALBcJ_P0091064 Itgb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091065.1 MGP_BALBcJ_G0034273.1 mouse_genomes_project 8 127312035 127336720 + Itgb1 protein_coding retained_intron MGP_BALBcJ_T0091066.1 MGP_BALBcJ_G0034273.1 mouse_genomes_project 8 127350299 127358356 + MGP_BALBcJ_P0091066 Itgb1 protein_coding protein_coding MGP_BALBcJ_T0015930.1 MGP_BALBcJ_G0014027.1 mouse_genomes_project 8 18167690 18168813 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088596.1 MGP_BALBcJ_G0033501.1 mouse_genomes_project 8 30970173 30992701 - MGP_BALBcJ_P0088596 Ubxn8 protein_coding protein_coding MGP_BALBcJ_T0090907.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121824882 121875613 - MGP_BALBcJ_P0090907 Fanca protein_coding protein_coding MGP_BALBcJ_T0090908.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121825865 121830814 - Fanca protein_coding processed_transcript MGP_BALBcJ_T0090909.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121826344 121875590 - MGP_BALBcJ_P0090909 Fanca protein_coding unknown_likely_coding MGP_BALBcJ_T0090910.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121827778 121834304 - MGP_BALBcJ_P0090910 Fanca protein_coding protein_coding MGP_BALBcJ_T0090911.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121830748 121833284 - MGP_BALBcJ_P0090911 Fanca protein_coding protein_coding MGP_BALBcJ_T0090912.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121834151 121838861 - Fanca protein_coding retained_intron MGP_BALBcJ_T0090913.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121843641 121875597 - Fanca protein_coding retained_intron MGP_BALBcJ_T0090914.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121843857 121870776 - MGP_BALBcJ_P0090914 Fanca protein_coding protein_coding MGP_BALBcJ_T0090915.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121846813 121849292 - Fanca protein_coding retained_intron MGP_BALBcJ_T0090916.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121859522 121875597 - MGP_BALBcJ_P0090916 Fanca protein_coding protein_coding MGP_BALBcJ_T0090917.1 MGP_BALBcJ_G0034224.1 mouse_genomes_project 8 121869695 121875597 - Fanca protein_coding retained_intron MGP_BALBcJ_T0101766.1 MGP_BALBcJ_G0039719.1 mouse_genomes_project 8 69613542 69615864 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101767.1 MGP_BALBcJ_G0039719.1 mouse_genomes_project 8 69614215 69614838 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0088551.1 MGP_BALBcJ_G0033476.1 mouse_genomes_project 8 24417783 24431360 + MGP_BALBcJ_P0088551 Prosc protein_coding protein_coding MGP_BALBcJ_T0088552.1 MGP_BALBcJ_G0033476.1 mouse_genomes_project 8 24417783 24425469 + MGP_BALBcJ_P0088552 Prosc protein_coding protein_coding MGP_BALBcJ_T0090023.1 MGP_BALBcJ_G0033930.1 mouse_genomes_project 8 91924947 91926489 + MGP_BALBcJ_P0090023 Mt3 protein_coding protein_coding MGP_BALBcJ_T0088561.1 MGP_BALBcJ_G0033481.1 mouse_genomes_project 8 24616265 24620078 - MGP_BALBcJ_P0088561 Adrb3 protein_coding protein_coding MGP_BALBcJ_T0088562.1 MGP_BALBcJ_G0033481.1 mouse_genomes_project 8 24616490 24619073 - MGP_BALBcJ_P0088562 Adrb3 protein_coding protein_coding MGP_BALBcJ_T0088563.1 MGP_BALBcJ_G0033481.1 mouse_genomes_project 8 24617288 24618984 - MGP_BALBcJ_P0088563 Adrb3 protein_coding protein_coding MGP_BALBcJ_T0100123.1 MGP_BALBcJ_G0038159.1 mouse_genomes_project 8 48122284 48122347 + Gm23986 snRNA snRNA MGP_BALBcJ_T0090949.1 MGP_BALBcJ_G0034238.1 mouse_genomes_project 8 122464918 122518431 - MGP_BALBcJ_P0090949 Nup133 protein_coding protein_coding MGP_BALBcJ_T0010951.1 MGP_BALBcJ_G0009076.1 mouse_genomes_project 8 68535362 68535425 - Mir7067 miRNA miRNA MGP_BALBcJ_T0005345.1 MGP_BALBcJ_G0004531.1 mouse_genomes_project 8 66012056 66013588 + Gm15656 antisense antisense MGP_BALBcJ_T0090351.1 MGP_BALBcJ_G0034058.1 mouse_genomes_project 8 104706248 104752689 + MGP_BALBcJ_P0090351 Cdh3 protein_coding protein_coding MGP_BALBcJ_T0088125.1 MGP_BALBcJ_G0033332.1 mouse_genomes_project 8 8258661 8373070 - MGP_BALBcJ_P0088125 Col4a1 protein_coding protein_coding MGP_BALBcJ_T0088126.1 MGP_BALBcJ_G0033332.1 mouse_genomes_project 8 8272631 8277032 - Col4a1 protein_coding processed_transcript MGP_BALBcJ_T0088859.1 MGP_BALBcJ_G0033578.1 mouse_genomes_project 8 45205752 45207418 + MGP_BALBcJ_P0088859 protein_coding protein_coding MGP_BALBcJ_T0090874.1 MGP_BALBcJ_G0034217.1 mouse_genomes_project 8 121688418 121704277 - MGP_BALBcJ_P0090874 Sult5a1 protein_coding protein_coding MGP_BALBcJ_T0090875.1 MGP_BALBcJ_G0034217.1 mouse_genomes_project 8 121688420 121704277 - MGP_BALBcJ_P0090875 Sult5a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090876.1 MGP_BALBcJ_G0034217.1 mouse_genomes_project 8 121690995 121704264 - MGP_BALBcJ_P0090876 Sult5a1 protein_coding protein_coding MGP_BALBcJ_T0090877.1 MGP_BALBcJ_G0034217.1 mouse_genomes_project 8 121693989 121704235 - MGP_BALBcJ_P0090877 Sult5a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090878.1 MGP_BALBcJ_G0034217.1 mouse_genomes_project 8 121703001 121704281 - Sult5a1 protein_coding retained_intron MGP_BALBcJ_T0090879.1 MGP_BALBcJ_G0034217.1 mouse_genomes_project 8 121703271 121704322 - Sult5a1 protein_coding retained_intron MGP_BALBcJ_T0090034.1 MGP_BALBcJ_G0033936.1 mouse_genomes_project 8 92249787 92303908 + MGP_BALBcJ_P0090034 Nlrc5 protein_coding protein_coding MGP_BALBcJ_T0090035.1 MGP_BALBcJ_G0033936.1 mouse_genomes_project 8 92253146 92284278 + Nlrc5 protein_coding retained_intron MGP_BALBcJ_T0090036.1 MGP_BALBcJ_G0033936.1 mouse_genomes_project 8 92259284 92268842 + MGP_BALBcJ_P0090036 Nlrc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090037.1 MGP_BALBcJ_G0033936.1 mouse_genomes_project 8 92299263 92301342 + Nlrc5 protein_coding retained_intron MGP_BALBcJ_T0090038.1 MGP_BALBcJ_G0033936.1 mouse_genomes_project 8 92302899 92305101 + Nlrc5 protein_coding retained_intron MGP_BALBcJ_T0090039.1 MGP_BALBcJ_G0033936.1 mouse_genomes_project 8 92302899 92305097 + MGP_BALBcJ_P0090039 Nlrc5 protein_coding protein_coding MGP_BALBcJ_T0088924.1 MGP_BALBcJ_G0033603.1 mouse_genomes_project 8 55161286 55288827 - MGP_BALBcJ_P0088924 Galnt7 protein_coding protein_coding MGP_BALBcJ_T0088925.1 MGP_BALBcJ_G0033603.1 mouse_genomes_project 8 55162158 55288799 - MGP_BALBcJ_P0088925 Galnt7 protein_coding protein_coding MGP_BALBcJ_T0088926.1 MGP_BALBcJ_G0033603.1 mouse_genomes_project 8 55163482 55175901 - Galnt7 protein_coding processed_transcript MGP_BALBcJ_T0088927.1 MGP_BALBcJ_G0033603.1 mouse_genomes_project 8 55179442 55288828 - Galnt7 protein_coding retained_intron MGP_BALBcJ_T0100151.1 MGP_BALBcJ_G0038187.1 mouse_genomes_project 8 108699404 108699511 - Gm23627 snRNA snRNA MGP_BALBcJ_T0089304.1 MGP_BALBcJ_G0033715.1 mouse_genomes_project 8 68570528 68572134 + MGP_BALBcJ_P0089304 protein_coding protein_coding MGP_BALBcJ_T0088476.1 MGP_BALBcJ_G0033456.1 mouse_genomes_project 8 22493842 22540666 - MGP_BALBcJ_P0088476 Tacc1 protein_coding protein_coding MGP_BALBcJ_T0088477.1 MGP_BALBcJ_G0033456.1 mouse_genomes_project 8 22493842 22540666 - MGP_BALBcJ_P0088477 Tacc1 protein_coding protein_coding MGP_BALBcJ_T0090226.1 MGP_BALBcJ_G0034006.1 mouse_genomes_project 8 103417764 103422443 + MGP_BALBcJ_P0090226 Fbxl8 protein_coding protein_coding MGP_BALBcJ_T0090227.1 MGP_BALBcJ_G0034006.1 mouse_genomes_project 8 103417798 103422287 + MGP_BALBcJ_P0090227 Fbxl8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090659.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118393971 118440880 + MGP_BALBcJ_P0090659 Usp10 protein_coding protein_coding MGP_BALBcJ_T0090660.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118394425 118440885 + MGP_BALBcJ_P0090660 Usp10 protein_coding protein_coding MGP_BALBcJ_T0090661.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118394444 118435952 + Usp10 protein_coding processed_transcript MGP_BALBcJ_T0090662.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118394468 118435259 + MGP_BALBcJ_P0090662 Usp10 protein_coding protein_coding MGP_BALBcJ_T0090663.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118427402 118432043 + Usp10 protein_coding processed_transcript MGP_BALBcJ_T0090664.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118431627 118436616 + Usp10 protein_coding retained_intron MGP_BALBcJ_T0090665.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118431738 118435728 + Usp10 protein_coding retained_intron MGP_BALBcJ_T0090666.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118435287 118438642 + Usp10 protein_coding retained_intron MGP_BALBcJ_T0090667.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118435976 118438136 + Usp10 protein_coding retained_intron MGP_BALBcJ_T0090668.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118436599 118440194 + MGP_BALBcJ_P0090668 Usp10 protein_coding protein_coding MGP_BALBcJ_T0090669.1 MGP_BALBcJ_G0034169.1 mouse_genomes_project 8 118439530 118440882 + Usp10 protein_coding processed_transcript MGP_BALBcJ_T0090746.1 MGP_BALBcJ_G0034186.1 mouse_genomes_project 8 120076181 120105951 - MGP_BALBcJ_P0090746 Fbxo31 protein_coding protein_coding MGP_BALBcJ_T0090747.1 MGP_BALBcJ_G0034186.1 mouse_genomes_project 8 120080746 120086234 - Fbxo31 protein_coding processed_transcript MGP_BALBcJ_T0090748.1 MGP_BALBcJ_G0034186.1 mouse_genomes_project 8 120082370 120087096 - Fbxo31 protein_coding retained_intron MGP_BALBcJ_T0090749.1 MGP_BALBcJ_G0034186.1 mouse_genomes_project 8 120091463 120105935 - MGP_BALBcJ_P0090749 Fbxo31 protein_coding protein_coding MGP_BALBcJ_T0087971.1 MGP_BALBcJ_G0033283.1 mouse_genomes_project 8 287382 324536 + MGP_BALBcJ_P0087971 A430078G23Rik protein_coding protein_coding MGP_BALBcJ_T0009124.1 MGP_BALBcJ_G0007334.1 mouse_genomes_project 8 85185267 85202354 - Gm27016 lincRNA lincRNA MGP_BALBcJ_T0089342.1 MGP_BALBcJ_G0033723.1 mouse_genomes_project 8 69043750 69047617 + MGP_BALBcJ_P0089342 Ankle1 protein_coding protein_coding MGP_BALBcJ_T0089343.1 MGP_BALBcJ_G0033723.1 mouse_genomes_project 8 69043756 69047581 + Ankle1 protein_coding retained_intron MGP_BALBcJ_T0089344.1 MGP_BALBcJ_G0033723.1 mouse_genomes_project 8 69043762 69047219 + Ankle1 protein_coding retained_intron MGP_BALBcJ_T0089345.1 MGP_BALBcJ_G0033723.1 mouse_genomes_project 8 69043764 69047226 + MGP_BALBcJ_P0089345 Ankle1 protein_coding protein_coding MGP_BALBcJ_T0089346.1 MGP_BALBcJ_G0033723.1 mouse_genomes_project 8 69045431 69046898 + Ankle1 protein_coding retained_intron MGP_BALBcJ_T0090200.1 MGP_BALBcJ_G0033999.1 mouse_genomes_project 8 103184575 103200679 + MGP_BALBcJ_P0090200 protein_coding protein_coding MGP_BALBcJ_T0090201.1 MGP_BALBcJ_G0033999.1 mouse_genomes_project 8 103184575 103200679 + MGP_BALBcJ_P0090201 protein_coding protein_coding MGP_BALBcJ_T0005322.1 MGP_BALBcJ_G0004512.1 mouse_genomes_project 8 20460427 20471535 - Gm15816 antisense antisense MGP_BALBcJ_T0090267.1 MGP_BALBcJ_G0034022.1 mouse_genomes_project 8 103683307 103688459 + MGP_BALBcJ_P0090267 Hsd11b2 protein_coding protein_coding MGP_BALBcJ_T0089360.1 MGP_BALBcJ_G0033727.1 mouse_genomes_project 8 69118401 69128286 - MGP_BALBcJ_P0089360 Ano8 protein_coding protein_coding MGP_BALBcJ_T0098399.1 MGP_BALBcJ_G0036453.1 mouse_genomes_project 8 85854728 85855159 - pseudogene pseudogene MGP_BALBcJ_T0089035.1 MGP_BALBcJ_G0033635.1 mouse_genomes_project 8 65045921 65053631 + MGP_BALBcJ_P0089035 Nat2 protein_coding protein_coding MGP_BALBcJ_T0089036.1 MGP_BALBcJ_G0033635.1 mouse_genomes_project 8 65046002 65053635 + MGP_BALBcJ_P0089036 Nat2 protein_coding protein_coding MGP_BALBcJ_T0015969.1 MGP_BALBcJ_G0014066.1 mouse_genomes_project 8 79462321 79463938 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015981.1 MGP_BALBcJ_G0014078.1 mouse_genomes_project 8 97959611 97960105 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090286.1 MGP_BALBcJ_G0034030.1 mouse_genomes_project 8 103880390 103884664 - MGP_BALBcJ_P0090286 Enkd1 protein_coding protein_coding MGP_BALBcJ_T0088111.1 MGP_BALBcJ_G0033322.1 mouse_genomes_project 8 5639723 5684692 - MGP_BALBcJ_P0088111 Efnb2 protein_coding protein_coding MGP_BALBcJ_T0088112.1 MGP_BALBcJ_G0033322.1 mouse_genomes_project 8 5642886 5661501 - MGP_BALBcJ_P0088112 Efnb2 protein_coding protein_coding MGP_BALBcJ_T0090724.1 MGP_BALBcJ_G0034181.1 mouse_genomes_project 8 119598761 119602520 + MGP_BALBcJ_P0090724 Foxf1 protein_coding protein_coding MGP_BALBcJ_T0005301.1 MGP_BALBcJ_G0004497.1 mouse_genomes_project 8 652303 681717 + Gm16553 antisense antisense MGP_BALBcJ_T0010956.1 MGP_BALBcJ_G0009081.1 mouse_genomes_project 8 70654273 70654353 + Mir28b miRNA miRNA MGP_BALBcJ_T0088044.1 MGP_BALBcJ_G0033305.1 mouse_genomes_project 8 914094 923620 - MGP_BALBcJ_P0088044 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010957.1 MGP_BALBcJ_G0009082.1 mouse_genomes_project 8 81363481 81363588 - Mir1668 miRNA miRNA MGP_BALBcJ_T0010923.1 MGP_BALBcJ_G0009048.1 mouse_genomes_project 8 2703625 2703694 + Gm22565 miRNA miRNA MGP_BALBcJ_T0090383.1 MGP_BALBcJ_G0034071.1 mouse_genomes_project 8 105381876 105422903 + MGP_BALBcJ_P0090383 Cyb5b protein_coding protein_coding MGP_BALBcJ_T0010975.1 MGP_BALBcJ_G0009100.1 mouse_genomes_project 8 85854848 85854916 + Mir7071 miRNA miRNA MGP_BALBcJ_T0089848.1 MGP_BALBcJ_G0033878.1 mouse_genomes_project 8 83159737 83195382 + MGP_BALBcJ_P0089848 Gpt2 protein_coding protein_coding MGP_BALBcJ_T0089849.1 MGP_BALBcJ_G0033878.1 mouse_genomes_project 8 83159768 83192669 + MGP_BALBcJ_P0089849 Gpt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089850.1 MGP_BALBcJ_G0033878.1 mouse_genomes_project 8 83159770 83160469 + Gpt2 protein_coding processed_transcript MGP_BALBcJ_T0089851.1 MGP_BALBcJ_G0033878.1 mouse_genomes_project 8 83183786 83189333 + Gpt2 protein_coding retained_intron MGP_BALBcJ_T0089852.1 MGP_BALBcJ_G0033878.1 mouse_genomes_project 8 83187255 83193515 + Gpt2 protein_coding processed_transcript MGP_BALBcJ_T0088359.1 MGP_BALBcJ_G0033418.1 mouse_genomes_project 8 19305643 19374421 - MGP_BALBcJ_P0088359 Atp7b protein_coding protein_coding MGP_BALBcJ_T0088360.1 MGP_BALBcJ_G0033418.1 mouse_genomes_project 8 19307504 19374135 - MGP_BALBcJ_P0088360 Atp7b protein_coding protein_coding MGP_BALBcJ_T0089542.1 MGP_BALBcJ_G0033786.1 mouse_genomes_project 8 76789135 76832869 - MGP_BALBcJ_P0089542 1700011L22Rik protein_coding protein_coding MGP_BALBcJ_T0010999.1 MGP_BALBcJ_G0009124.1 mouse_genomes_project 8 115902246 115902310 + Mir7078 miRNA miRNA MGP_BALBcJ_T0090397.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105653701 105666277 - MGP_BALBcJ_P0090397 Nob1 protein_coding protein_coding MGP_BALBcJ_T0090398.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105653707 105662784 - Nob1 protein_coding retained_intron MGP_BALBcJ_T0090399.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105653707 105666263 - MGP_BALBcJ_P0090399 Nob1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090400.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105657459 105666208 - Nob1 protein_coding retained_intron MGP_BALBcJ_T0090401.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105658916 105666273 - Nob1 protein_coding retained_intron MGP_BALBcJ_T0090402.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105659277 105663549 - Nob1 protein_coding processed_transcript MGP_BALBcJ_T0090403.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105659375 105659888 - Nob1 protein_coding retained_intron MGP_BALBcJ_T0090404.1 MGP_BALBcJ_G0034074.1 mouse_genomes_project 8 105659571 105666248 - MGP_BALBcJ_P0090404 Nob1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005351.1 MGP_BALBcJ_G0004536.1 mouse_genomes_project 8 82272585 82278508 - Gm16183 antisense antisense MGP_BALBcJ_T0090918.1 MGP_BALBcJ_G0034225.1 mouse_genomes_project 8 121889161 121926555 + MGP_BALBcJ_P0090918 Spire2 protein_coding protein_coding MGP_BALBcJ_T0088385.1 MGP_BALBcJ_G0033431.1 mouse_genomes_project 8 19939319 19942805 + MGP_BALBcJ_P0088385 Dkk4 protein_coding protein_coding MGP_BALBcJ_T0089147.1 MGP_BALBcJ_G0033671.1 mouse_genomes_project 8 67755942 67763647 + MGP_BALBcJ_P0089147 protein_coding protein_coding MGP_BALBcJ_T0089148.1 MGP_BALBcJ_G0033671.1 mouse_genomes_project 8 67756144 67761933 + protein_coding retained_intron MGP_BALBcJ_T0089149.1 MGP_BALBcJ_G0033671.1 mouse_genomes_project 8 67756148 67783854 + MGP_BALBcJ_P0089149 protein_coding protein_coding MGP_BALBcJ_T0089150.1 MGP_BALBcJ_G0033671.1 mouse_genomes_project 8 67756150 67761947 + MGP_BALBcJ_P0089150 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089151.1 MGP_BALBcJ_G0033671.1 mouse_genomes_project 8 67756160 67763652 + MGP_BALBcJ_P0089151 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089152.1 MGP_BALBcJ_G0033671.1 mouse_genomes_project 8 67756714 67763710 + MGP_BALBcJ_P0089152 protein_coding protein_coding MGP_BALBcJ_T0098657.1 MGP_BALBcJ_G0036711.1 mouse_genomes_project 8 33129215 33129329 + Gm22216 rRNA rRNA MGP_BALBcJ_T0101423.1 MGP_BALBcJ_G0039459.1 mouse_genomes_project 8 109121333 109121422 - Snord111 snoRNA snoRNA MGP_BALBcJ_T0101387.1 MGP_BALBcJ_G0039423.1 mouse_genomes_project 8 36426029 36426161 - Gm23128 snoRNA snoRNA MGP_BALBcJ_T0088038.1 MGP_BALBcJ_G0033302.1 mouse_genomes_project 8 808028 814373 - MGP_BALBcJ_P0088038 Cd209e protein_coding protein_coding MGP_BALBcJ_T0089457.1 MGP_BALBcJ_G0033757.1 mouse_genomes_project 8 70098336 70116948 - MGP_BALBcJ_P0089457 Calr3 protein_coding protein_coding MGP_BALBcJ_T0089458.1 MGP_BALBcJ_G0033757.1 mouse_genomes_project 8 70098343 70108303 - MGP_BALBcJ_P0089458 Calr3 protein_coding protein_coding MGP_BALBcJ_T0090076.1 MGP_BALBcJ_G0033947.1 mouse_genomes_project 8 92627428 92634169 + MGP_BALBcJ_P0090076 Polr2c protein_coding protein_coding MGP_BALBcJ_T0005368.1 MGP_BALBcJ_G0004550.1 mouse_genomes_project 8 110911325 110927684 - Gm26994 antisense antisense MGP_BALBcJ_T0100141.1 MGP_BALBcJ_G0038177.1 mouse_genomes_project 8 84355722 84355830 - Gm22305 snRNA snRNA MGP_BALBcJ_T0090320.1 MGP_BALBcJ_G0034047.1 mouse_genomes_project 8 104173937 104199464 + MGP_BALBcJ_P0090320 Dus2 protein_coding protein_coding MGP_BALBcJ_T0090322.1 MGP_BALBcJ_G0034047.1 mouse_genomes_project 8 104195236 104239034 + MGP_BALBcJ_P0090322 Dus2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090323.1 MGP_BALBcJ_G0034047.1 mouse_genomes_project 8 104195236 104239013 + MGP_BALBcJ_P0090323 Dus2 protein_coding protein_coding MGP_BALBcJ_T0090324.1 MGP_BALBcJ_G0034047.1 mouse_genomes_project 8 104195251 104215422 + Dus2 protein_coding retained_intron MGP_BALBcJ_T0090325.1 MGP_BALBcJ_G0034047.1 mouse_genomes_project 8 104217996 104231468 + Dus2 protein_coding retained_intron MGP_BALBcJ_T0090326.1 MGP_BALBcJ_G0034047.1 mouse_genomes_project 8 104233901 104237393 + Dus2 protein_coding retained_intron MGP_BALBcJ_T0089101.1 MGP_BALBcJ_G0033654.1 mouse_genomes_project 8 67365845 67379135 - MGP_BALBcJ_P0089101 Zfp866 protein_coding protein_coding MGP_BALBcJ_T0089976.1 MGP_BALBcJ_G0033917.1 mouse_genomes_project 8 90857565 90900850 - MGP_BALBcJ_P0089976 Ces1c protein_coding protein_coding MGP_BALBcJ_T0089977.1 MGP_BALBcJ_G0033917.1 mouse_genomes_project 8 90864435 90900862 - Ces1c protein_coding retained_intron MGP_BALBcJ_T0089978.1 MGP_BALBcJ_G0033917.1 mouse_genomes_project 8 90865870 90894247 - MGP_BALBcJ_P0089978 Ces1c protein_coding protein_coding MGP_BALBcJ_T0088201.1 MGP_BALBcJ_G0033349.1 mouse_genomes_project 8 10111872 10121644 + MGP_BALBcJ_P0088201 F7 protein_coding protein_coding MGP_BALBcJ_T0090717.1 MGP_BALBcJ_G0034180.1 mouse_genomes_project 8 119242236 119263173 + MGP_BALBcJ_P0090717 Irf8 protein_coding protein_coding MGP_BALBcJ_T0090718.1 MGP_BALBcJ_G0034180.1 mouse_genomes_project 8 119242237 119249823 + Irf8 protein_coding retained_intron MGP_BALBcJ_T0090719.1 MGP_BALBcJ_G0034180.1 mouse_genomes_project 8 119242263 119259957 + MGP_BALBcJ_P0090719 Irf8 protein_coding protein_coding MGP_BALBcJ_T0090720.1 MGP_BALBcJ_G0034180.1 mouse_genomes_project 8 119244517 119262060 + MGP_BALBcJ_P0090720 Irf8 protein_coding protein_coding MGP_BALBcJ_T0090722.1 MGP_BALBcJ_G0034180.1 mouse_genomes_project 8 119251958 119260212 + Irf8 protein_coding retained_intron MGP_BALBcJ_T0090723.1 MGP_BALBcJ_G0034180.1 mouse_genomes_project 8 119258687 119260190 + Irf8 protein_coding processed_transcript MGP_BALBcJ_T0088787.1 MGP_BALBcJ_G0033560.1 mouse_genomes_project 8 43496060 43519449 + MGP_BALBcJ_P0088787 Ufsp2 protein_coding protein_coding MGP_BALBcJ_T0088788.1 MGP_BALBcJ_G0033560.1 mouse_genomes_project 8 43496066 43519348 + Ufsp2 protein_coding retained_intron MGP_BALBcJ_T0088789.1 MGP_BALBcJ_G0033560.1 mouse_genomes_project 8 43496076 43501494 + Ufsp2 protein_coding retained_intron MGP_BALBcJ_T0088790.1 MGP_BALBcJ_G0033560.1 mouse_genomes_project 8 43496082 43506000 + Ufsp2 protein_coding processed_transcript MGP_BALBcJ_T0088791.1 MGP_BALBcJ_G0033560.1 mouse_genomes_project 8 43496110 43501011 + Ufsp2 protein_coding processed_transcript MGP_BALBcJ_T0088792.1 MGP_BALBcJ_G0033560.1 mouse_genomes_project 8 43517618 43519351 + Ufsp2 protein_coding retained_intron MGP_BALBcJ_T0009182.1 MGP_BALBcJ_G0007374.1 mouse_genomes_project 8 121792700 121798824 + 4933417D19Rik lincRNA lincRNA MGP_BALBcJ_T0005356.1 MGP_BALBcJ_G0004541.1 mouse_genomes_project 8 102292909 102299802 - Gm10631 antisense antisense MGP_BALBcJ_T0089955.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89072647 89433022 + MGP_BALBcJ_P0089955 Fto protein_coding protein_coding MGP_BALBcJ_T0089956.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89072650 89204359 + Fto protein_coding retained_intron MGP_BALBcJ_T0089957.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89072673 89285290 + Fto protein_coding retained_intron MGP_BALBcJ_T0089958.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89072683 89247222 + Fto protein_coding retained_intron MGP_BALBcJ_T0089959.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89155313 89177638 + MGP_BALBcJ_P0089959 Fto protein_coding protein_coding MGP_BALBcJ_T0089960.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89158352 89177262 + MGP_BALBcJ_P0089960 Fto protein_coding protein_coding MGP_BALBcJ_T0089961.1 MGP_BALBcJ_G0033907.1 mouse_genomes_project 8 89227128 89431522 + Fto protein_coding processed_transcript MGP_BALBcJ_T0018444.1 MGP_BALBcJ_G0015659.1 mouse_genomes_project 8 82737166 82744458 - A230103J11Rik processed_transcript processed_transcript MGP_BALBcJ_T0018445.1 MGP_BALBcJ_G0015659.1 mouse_genomes_project 8 82737195 82744441 - A230103J11Rik processed_transcript processed_transcript MGP_BALBcJ_T0089214.1 MGP_BALBcJ_G0033680.1 mouse_genomes_project 8 67930802 67946754 + MGP_BALBcJ_P0089214 protein_coding protein_coding MGP_BALBcJ_T0089215.1 MGP_BALBcJ_G0033680.1 mouse_genomes_project 8 67930802 67946759 + MGP_BALBcJ_P0089215 protein_coding protein_coding MGP_BALBcJ_T0089216.1 MGP_BALBcJ_G0033680.1 mouse_genomes_project 8 67933378 67937654 + protein_coding retained_intron MGP_BALBcJ_T0088747.1 MGP_BALBcJ_G0033552.1 mouse_genomes_project 8 42777543 42803732 - MGP_BALBcJ_P0088747 protein_coding protein_coding MGP_BALBcJ_T0088516.1 MGP_BALBcJ_G0033462.1 mouse_genomes_project 8 23105202 23120809 + MGP_BALBcJ_P0088516 protein_coding protein_coding MGP_BALBcJ_T0088575.1 MGP_BALBcJ_G0033489.1 mouse_genomes_project 8 28482997 28505459 + MGP_BALBcJ_P0088575 Rnf122 protein_coding protein_coding MGP_BALBcJ_T0088576.1 MGP_BALBcJ_G0033489.1 mouse_genomes_project 8 28483007 28494443 + Rnf122 protein_coding retained_intron MGP_BALBcJ_T0088577.1 MGP_BALBcJ_G0033489.1 mouse_genomes_project 8 28483325 28502663 + MGP_BALBcJ_P0088577 Rnf122 protein_coding unknown_likely_coding MGP_BALBcJ_T0090921.1 MGP_BALBcJ_G0034227.1 mouse_genomes_project 8 121963937 121969446 + MGP_BALBcJ_P0090921 Mc1r protein_coding protein_coding MGP_BALBcJ_T0088336.1 MGP_BALBcJ_G0033398.1 mouse_genomes_project 8 16259411 16259649 + MGP_BALBcJ_P0088336 Defb6 protein_coding protein_coding MGP_BALBcJ_T0100114.1 MGP_BALBcJ_G0038150.1 mouse_genomes_project 8 22274555 22274658 + Gm23898 snRNA snRNA MGP_BALBcJ_T0009096.1 MGP_BALBcJ_G0007314.1 mouse_genomes_project 8 75198112 75203296 + 1700092C02Rik lincRNA lincRNA MGP_BALBcJ_T0089661.1 MGP_BALBcJ_G0033829.1 mouse_genomes_project 8 81717142 81747746 + MGP_BALBcJ_P0089661 Rfx1 protein_coding protein_coding MGP_BALBcJ_T0089097.1 MGP_BALBcJ_G0033652.1 mouse_genomes_project 8 67346964 67355202 - MGP_BALBcJ_P0089097 Zfp963 protein_coding protein_coding MGP_BALBcJ_T0089099.1 MGP_BALBcJ_G0033652.1 mouse_genomes_project 8 67348259 67355210 - MGP_BALBcJ_P0089099 Zfp963 protein_coding protein_coding MGP_BALBcJ_T0005333.1 MGP_BALBcJ_G0004521.1 mouse_genomes_project 8 44554681 44566060 - 4930579M01Rik antisense antisense MGP_BALBcJ_T0009074.1 MGP_BALBcJ_G0007294.1 mouse_genomes_project 8 31560560 31569910 + Gm29243 lincRNA lincRNA MGP_BALBcJ_T0088169.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9838435 9953342 + MGP_BALBcJ_P0088169 Atp11a protein_coding protein_coding MGP_BALBcJ_T0088170.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9838437 9953342 + MGP_BALBcJ_P0088170 Atp11a protein_coding protein_coding MGP_BALBcJ_T0088171.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9838490 9944334 + MGP_BALBcJ_P0088171 Atp11a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088172.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9895109 9898077 + Atp11a protein_coding retained_intron MGP_BALBcJ_T0088173.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9906093 9912231 + Atp11a protein_coding retained_intron MGP_BALBcJ_T0088174.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9918857 9953281 + MGP_BALBcJ_P0088174 Atp11a protein_coding protein_coding MGP_BALBcJ_T0088175.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9931547 9941884 + MGP_BALBcJ_P0088175 Atp11a protein_coding protein_coding MGP_BALBcJ_T0088176.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9933533 9935417 + Atp11a protein_coding processed_transcript MGP_BALBcJ_T0088177.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9941573 9946819 + MGP_BALBcJ_P0088177 Atp11a protein_coding protein_coding MGP_BALBcJ_T0088178.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9942575 9946816 + MGP_BALBcJ_P0088178 Atp11a protein_coding protein_coding MGP_BALBcJ_T0088179.1 MGP_BALBcJ_G0033347.1 mouse_genomes_project 8 9946178 9950184 + Atp11a protein_coding retained_intron MGP_BALBcJ_T0100126.1 MGP_BALBcJ_G0038162.1 mouse_genomes_project 8 51108785 51108847 + Gm22841 snRNA snRNA MGP_BALBcJ_T0098661.1 MGP_BALBcJ_G0036715.1 mouse_genomes_project 8 52474678 52474797 + n-R5s98 rRNA rRNA MGP_BALBcJ_T0005382.1 MGP_BALBcJ_G0004563.1 mouse_genomes_project 8 122404965 122407251 - 2810455O05Rik antisense antisense MGP_BALBcJ_T0089293.1 MGP_BALBcJ_G0033707.1 mouse_genomes_project 8 68449071 68461628 + MGP_BALBcJ_P0089293 Il12rb1 protein_coding protein_coding MGP_BALBcJ_T0011694.1 MGP_BALBcJ_G0009819.1 mouse_genomes_project 8 9435652 9435969 + Gm22207 misc_RNA misc_RNA MGP_BALBcJ_T0090049.1 MGP_BALBcJ_G0033940.1 mouse_genomes_project 8 92439711 92447245 + MGP_BALBcJ_P0090049 Arl2bp protein_coding protein_coding MGP_BALBcJ_T0090050.1 MGP_BALBcJ_G0033940.1 mouse_genomes_project 8 92440182 92447245 + MGP_BALBcJ_P0090050 Arl2bp protein_coding protein_coding MGP_BALBcJ_T0010987.1 MGP_BALBcJ_G0009112.1 mouse_genomes_project 8 104133120 104133183 - Mir7074 miRNA miRNA MGP_BALBcJ_T0088783.1 MGP_BALBcJ_G0033558.1 mouse_genomes_project 8 43454822 43464338 + MGP_BALBcJ_P0088783 Ccdc110 protein_coding protein_coding MGP_BALBcJ_T0088784.1 MGP_BALBcJ_G0033558.1 mouse_genomes_project 8 43454908 43461693 + MGP_BALBcJ_P0088784 Ccdc110 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088506.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069310 23074137 + MGP_BALBcJ_P0088506 Plpp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088507.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069310 23074137 + MGP_BALBcJ_P0088507 Plpp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088508.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069313 23074137 + Plpp5 protein_coding retained_intron MGP_BALBcJ_T0088509.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069313 23074137 + MGP_BALBcJ_P0088509 Plpp5 protein_coding protein_coding MGP_BALBcJ_T0088510.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069313 23074137 + MGP_BALBcJ_P0088510 Plpp5 protein_coding protein_coding MGP_BALBcJ_T0088511.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069349 23071401 + Plpp5 protein_coding retained_intron MGP_BALBcJ_T0088512.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069631 23074133 + Plpp5 protein_coding retained_intron MGP_BALBcJ_T0088513.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23069705 23074137 + Plpp5 protein_coding processed_transcript MGP_BALBcJ_T0088514.1 MGP_BALBcJ_G0033460.1 mouse_genomes_project 8 23072207 23073698 + Plpp5 protein_coding retained_intron MGP_BALBcJ_T0089994.1 MGP_BALBcJ_G0033923.1 mouse_genomes_project 8 91270774 91301813 - MGP_BALBcJ_P0089994 Ces5a protein_coding protein_coding MGP_BALBcJ_T0088865.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45637837 45680459 + MGP_BALBcJ_P0088865 Dctd protein_coding protein_coding MGP_BALBcJ_T0088866.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45649592 45681515 + MGP_BALBcJ_P0088866 Dctd protein_coding protein_coding MGP_BALBcJ_T0088867.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45649647 45681513 + MGP_BALBcJ_P0088867 Dctd protein_coding protein_coding MGP_BALBcJ_T0088868.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45649796 45681513 + MGP_BALBcJ_P0088868 Dctd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088869.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45649799 45677543 + Dctd protein_coding retained_intron MGP_BALBcJ_T0088870.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45649823 45678443 + Dctd protein_coding processed_transcript MGP_BALBcJ_T0088871.1 MGP_BALBcJ_G0033584.1 mouse_genomes_project 8 45649845 45693063 + MGP_BALBcJ_P0088871 Dctd protein_coding protein_coding MGP_BALBcJ_T0090518.1 MGP_BALBcJ_G0034114.1 mouse_genomes_project 8 109761588 109833488 - MGP_BALBcJ_P0090518 Wdr59 protein_coding protein_coding MGP_BALBcJ_T0090519.1 MGP_BALBcJ_G0034114.1 mouse_genomes_project 8 109761588 109833488 - MGP_BALBcJ_P0090519 Wdr59 protein_coding protein_coding MGP_BALBcJ_T0010986.1 MGP_BALBcJ_G0009111.1 mouse_genomes_project 8 103791379 103791487 + Mir1966 miRNA miRNA MGP_BALBcJ_T0009155.1 MGP_BALBcJ_G0007354.1 mouse_genomes_project 8 107338105 107515588 + D030068K23Rik lincRNA lincRNA MGP_BALBcJ_T0009156.1 MGP_BALBcJ_G0007354.1 mouse_genomes_project 8 107338106 107493097 + D030068K23Rik lincRNA lincRNA MGP_BALBcJ_T0009157.1 MGP_BALBcJ_G0007354.1 mouse_genomes_project 8 107511936 107536271 + D030068K23Rik lincRNA lincRNA MGP_BALBcJ_T0088257.1 MGP_BALBcJ_G0033369.1 mouse_genomes_project 8 10944512 10956530 + MGP_BALBcJ_P0088257 Champ1 protein_coding protein_coding MGP_BALBcJ_T0088258.1 MGP_BALBcJ_G0033369.1 mouse_genomes_project 8 10944575 10954706 + MGP_BALBcJ_P0088258 Champ1 protein_coding protein_coding MGP_BALBcJ_T0090869.1 MGP_BALBcJ_G0034216.1 mouse_genomes_project 8 121663003 121680782 + Cpne7 protein_coding retained_intron MGP_BALBcJ_T0090870.1 MGP_BALBcJ_G0034216.1 mouse_genomes_project 8 121663007 121680784 + MGP_BALBcJ_P0090870 Cpne7 protein_coding protein_coding MGP_BALBcJ_T0090871.1 MGP_BALBcJ_G0034216.1 mouse_genomes_project 8 121663076 121680784 + Cpne7 protein_coding retained_intron MGP_BALBcJ_T0090872.1 MGP_BALBcJ_G0034216.1 mouse_genomes_project 8 121672145 121673002 + Cpne7 protein_coding processed_transcript MGP_BALBcJ_T0090873.1 MGP_BALBcJ_G0034216.1 mouse_genomes_project 8 121674292 121677542 + Cpne7 protein_coding retained_intron MGP_BALBcJ_T0089295.1 MGP_BALBcJ_G0033709.1 mouse_genomes_project 8 68482068 68496870 - MGP_BALBcJ_P0089295 Kcnn1 protein_coding protein_coding MGP_BALBcJ_T0089296.1 MGP_BALBcJ_G0033709.1 mouse_genomes_project 8 68482068 68496870 - MGP_BALBcJ_P0089296 Kcnn1 protein_coding protein_coding MGP_BALBcJ_T0089297.1 MGP_BALBcJ_G0033709.1 mouse_genomes_project 8 68483191 68496821 - MGP_BALBcJ_P0089297 Kcnn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0101377.1 MGP_BALBcJ_G0039413.1 mouse_genomes_project 8 15630116 15630245 - Gm25763 snoRNA snoRNA MGP_BALBcJ_T0090321.1 MGP_BALBcJ_G0034048.1 mouse_genomes_project 8 104193350 104195612 - MGP_BALBcJ_P0090321 Ddx28 protein_coding protein_coding MGP_BALBcJ_T0089759.1 MGP_BALBcJ_G0033853.1 mouse_genomes_project 8 82559763 82566855 - MGP_BALBcJ_P0089759 Gcdh protein_coding protein_coding MGP_BALBcJ_T0089760.1 MGP_BALBcJ_G0033853.1 mouse_genomes_project 8 82563907 82566459 - Gcdh protein_coding retained_intron MGP_BALBcJ_T0089761.1 MGP_BALBcJ_G0033853.1 mouse_genomes_project 8 82564106 82565841 - Gcdh protein_coding retained_intron MGP_BALBcJ_T0089762.1 MGP_BALBcJ_G0033853.1 mouse_genomes_project 8 82565825 82566649 - Gcdh protein_coding retained_intron MGP_BALBcJ_T0089763.1 MGP_BALBcJ_G0033853.1 mouse_genomes_project 8 82566268 82567095 - MGP_BALBcJ_P0089763 Gcdh protein_coding protein_coding MGP_BALBcJ_T0090725.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119605999 119623078 - MGP_BALBcJ_P0090725 Mthfsd protein_coding protein_coding MGP_BALBcJ_T0090726.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119609383 119615557 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090727.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119611924 119623087 - MGP_BALBcJ_P0090727 Mthfsd protein_coding protein_coding MGP_BALBcJ_T0090728.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119611926 119623055 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090729.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119611928 119623070 - MGP_BALBcJ_P0090729 Mthfsd protein_coding protein_coding MGP_BALBcJ_T0090730.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119612138 119615965 - Mthfsd protein_coding retained_intron MGP_BALBcJ_T0090731.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119612222 119623152 - MGP_BALBcJ_P0090731 Mthfsd protein_coding protein_coding MGP_BALBcJ_T0090732.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119612308 119623139 - Mthfsd protein_coding retained_intron MGP_BALBcJ_T0090733.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119613079 119623048 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090734.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119613379 119620392 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090735.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119615547 119623058 - MGP_BALBcJ_P0090735 Mthfsd protein_coding protein_coding MGP_BALBcJ_T0090736.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119617094 119622403 - Mthfsd protein_coding retained_intron MGP_BALBcJ_T0090737.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119618223 119620449 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090738.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119618470 119623073 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090739.1 MGP_BALBcJ_G0034182.1 mouse_genomes_project 8 119618846 119623103 - Mthfsd protein_coding processed_transcript MGP_BALBcJ_T0090426.1 MGP_BALBcJ_G0034084.1 mouse_genomes_project 8 107937064 107959392 - MGP_BALBcJ_P0090426 Ist1 protein_coding protein_coding MGP_BALBcJ_T0088697.1 MGP_BALBcJ_G0033532.1 mouse_genomes_project 8 38082649 38089663 + MGP_BALBcJ_P0088697 Adam24 protein_coding protein_coding MGP_BALBcJ_T0089765.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582083 82584994 + MGP_BALBcJ_P0089765 Dnase2a protein_coding protein_coding MGP_BALBcJ_T0089766.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582083 82585233 + MGP_BALBcJ_P0089766 Dnase2a protein_coding protein_coding MGP_BALBcJ_T0089767.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582170 82582724 + Dnase2a protein_coding retained_intron MGP_BALBcJ_T0089768.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582170 82582992 + Dnase2a protein_coding retained_intron MGP_BALBcJ_T0089769.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582213 82583449 + MGP_BALBcJ_P0089769 Dnase2a protein_coding protein_coding MGP_BALBcJ_T0089770.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582244 82588004 + Dnase2a protein_coding processed_transcript MGP_BALBcJ_T0089771.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82582254 82583488 + MGP_BALBcJ_P0089771 Dnase2a protein_coding protein_coding MGP_BALBcJ_T0089772.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82583358 82584986 + Dnase2a protein_coding processed_transcript MGP_BALBcJ_T0089776.1 MGP_BALBcJ_G0033855.1 mouse_genomes_project 8 82586915 82596398 + Dnase2a protein_coding processed_transcript MGP_BALBcJ_T0009102.1 MGP_BALBcJ_G0007319.1 mouse_genomes_project 8 81534152 81546540 - Gm26721 lincRNA lincRNA MGP_BALBcJ_T0088115.1 MGP_BALBcJ_G0033325.1 mouse_genomes_project 8 6230146 6797299 - MGP_BALBcJ_P0088115 Fam155a protein_coding protein_coding MGP_BALBcJ_T0088039.1 MGP_BALBcJ_G0033303.1 mouse_genomes_project 8 836035 842743 - MGP_BALBcJ_P0088039 Cd209d protein_coding protein_coding MGP_BALBcJ_T0090990.1 MGP_BALBcJ_G0034253.1 mouse_genomes_project 8 123422569 123449768 + MGP_BALBcJ_P0090990 Gnpat protein_coding protein_coding MGP_BALBcJ_T0090991.1 MGP_BALBcJ_G0034253.1 mouse_genomes_project 8 123422608 123446447 + MGP_BALBcJ_P0090991 Gnpat protein_coding protein_coding MGP_BALBcJ_T0090992.1 MGP_BALBcJ_G0034253.1 mouse_genomes_project 8 123443155 123446769 + Gnpat protein_coding retained_intron MGP_BALBcJ_T0090993.1 MGP_BALBcJ_G0034253.1 mouse_genomes_project 8 123443224 123449264 + Gnpat protein_coding retained_intron MGP_BALBcJ_T0090994.1 MGP_BALBcJ_G0034253.1 mouse_genomes_project 8 123445224 123446626 + Gnpat protein_coding retained_intron MGP_BALBcJ_T0090995.1 MGP_BALBcJ_G0034253.1 mouse_genomes_project 8 123447360 123449334 + Gnpat protein_coding retained_intron MGP_BALBcJ_T0009108.1 MGP_BALBcJ_G0007325.1 mouse_genomes_project 8 84622853 84623524 - Gm27168 lincRNA lincRNA MGP_BALBcJ_T0089123.1 MGP_BALBcJ_G0033659.1 mouse_genomes_project 8 67487752 67495070 - MGP_BALBcJ_P0089123 Cilp2 protein_coding protein_coding MGP_BALBcJ_T0010940.1 MGP_BALBcJ_G0009065.1 mouse_genomes_project 8 31506581 31506672 - Mir6395 miRNA miRNA MGP_BALBcJ_T0101369.1 MGP_BALBcJ_G0039405.1 mouse_genomes_project 8 3228081 3228225 - Gm24288 snoRNA snoRNA MGP_BALBcJ_T0088580.1 MGP_BALBcJ_G0033492.1 mouse_genomes_project 8 28558720 28607469 + MGP_BALBcJ_P0088580 Fut10 protein_coding protein_coding MGP_BALBcJ_T0088581.1 MGP_BALBcJ_G0033492.1 mouse_genomes_project 8 28566852 28629248 + MGP_BALBcJ_P0088581 Fut10 protein_coding protein_coding MGP_BALBcJ_T0088582.1 MGP_BALBcJ_G0033492.1 mouse_genomes_project 8 28572905 28605702 + Fut10 protein_coding processed_transcript MGP_BALBcJ_T0100133.1 MGP_BALBcJ_G0038169.1 mouse_genomes_project 8 73822416 73822523 - Gm22509 snRNA snRNA MGP_BALBcJ_T0005339.1 MGP_BALBcJ_G0004526.1 mouse_genomes_project 8 59410678 59481719 + 4930512H18Rik antisense antisense MGP_BALBcJ_T0089083.1 MGP_BALBcJ_G0033645.1 mouse_genomes_project 8 66788919 66810893 + MGP_BALBcJ_P0089083 Zfp930 protein_coding unknown_likely_coding MGP_BALBcJ_T0089084.1 MGP_BALBcJ_G0033645.1 mouse_genomes_project 8 66806689 66809327 + MGP_BALBcJ_P0089084 Zfp930 protein_coding protein_coding MGP_BALBcJ_T0018442.1 MGP_BALBcJ_G0015658.1 mouse_genomes_project 8 82517718 82518936 + 1700122E12Rik processed_transcript processed_transcript MGP_BALBcJ_T0018443.1 MGP_BALBcJ_G0015658.1 mouse_genomes_project 8 82517968 82518737 + 1700122E12Rik processed_transcript processed_transcript MGP_BALBcJ_T0010983.1 MGP_BALBcJ_G0009108.1 mouse_genomes_project 8 102836362 102836437 - Gm44328 miRNA miRNA MGP_BALBcJ_T0089479.1 MGP_BALBcJ_G0033766.1 mouse_genomes_project 8 70416459 70418355 + MGP_BALBcJ_P0089479 F2rl3 protein_coding protein_coding MGP_BALBcJ_T0005338.1 MGP_BALBcJ_G0004525.1 mouse_genomes_project 8 58668933 58745626 - Gm16178 antisense antisense MGP_BALBcJ_T0101405.1 MGP_BALBcJ_G0039441.1 mouse_genomes_project 8 67739316 67739442 - Gm25906 snoRNA snoRNA MGP_BALBcJ_T0005316.1 MGP_BALBcJ_G0004508.1 mouse_genomes_project 8 13253078 13259382 + Gm16346 antisense antisense MGP_BALBcJ_T0090202.1 MGP_BALBcJ_G0034000.1 mouse_genomes_project 8 103186261 103201013 + MGP_BALBcJ_P0090202 protein_coding protein_coding MGP_BALBcJ_T0090203.1 MGP_BALBcJ_G0034000.1 mouse_genomes_project 8 103186261 103200697 + MGP_BALBcJ_P0090203 protein_coding protein_coding MGP_BALBcJ_T0090204.1 MGP_BALBcJ_G0034000.1 mouse_genomes_project 8 103191311 103231286 + MGP_BALBcJ_P0090204 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090539.1 MGP_BALBcJ_G0034118.1 mouse_genomes_project 8 110006971 110011982 - MGP_BALBcJ_P0090539 Ctrb1 protein_coding protein_coding MGP_BALBcJ_T0088034.1 MGP_BALBcJ_G0033300.1 mouse_genomes_project 8 649563 660051 - MGP_BALBcJ_P0088034 Clec4g protein_coding protein_coding MGP_BALBcJ_T0088035.1 MGP_BALBcJ_G0033300.1 mouse_genomes_project 8 658561 663149 - MGP_BALBcJ_P0088035 Clec4g protein_coding protein_coding MGP_BALBcJ_T0088036.1 MGP_BALBcJ_G0033300.1 mouse_genomes_project 8 659711 661151 - Clec4g protein_coding retained_intron MGP_BALBcJ_T0015961.1 MGP_BALBcJ_G0014058.1 mouse_genomes_project 8 76447366 76449347 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098398.1 MGP_BALBcJ_G0036452.1 mouse_genomes_project 8 77287634 77288193 - pseudogene pseudogene MGP_BALBcJ_T0088029.1 MGP_BALBcJ_G0033296.1 mouse_genomes_project 8 597879 602191 + MGP_BALBcJ_P0088029 Retn protein_coding protein_coding MGP_BALBcJ_T0088030.1 MGP_BALBcJ_G0033296.1 mouse_genomes_project 8 597879 600206 + MGP_BALBcJ_P0088030 Retn protein_coding protein_coding MGP_BALBcJ_T0090989.1 MGP_BALBcJ_G0034252.1 mouse_genomes_project 8 123405156 123422566 - MGP_BALBcJ_P0090989 2810004N23Rik protein_coding protein_coding MGP_BALBcJ_T0009179.1 MGP_BALBcJ_G0007372.1 mouse_genomes_project 8 120376840 120377652 - lincRNA lincRNA MGP_BALBcJ_T0088584.1 MGP_BALBcJ_G0033494.1 mouse_genomes_project 8 29201442 29302109 - MGP_BALBcJ_P0088584 Nrg1 protein_coding protein_coding MGP_BALBcJ_T0005362.1 MGP_BALBcJ_G0004545.1 mouse_genomes_project 8 105248770 105250284 - Gm16208 antisense antisense MGP_BALBcJ_T0087984.1 MGP_BALBcJ_G0033287.1 mouse_genomes_project 8 430210 434281 + MGP_BALBcJ_P0087984 Zfp358 protein_coding protein_coding MGP_BALBcJ_T0088731.1 MGP_BALBcJ_G0033543.1 mouse_genomes_project 8 40631143 40641844 + MGP_BALBcJ_P0088731 Triml2 protein_coding protein_coding MGP_BALBcJ_T0010924.1 MGP_BALBcJ_G0009049.1 mouse_genomes_project 8 5714737 5714807 - Mir7654 miRNA miRNA MGP_BALBcJ_T0100162.1 MGP_BALBcJ_G0038198.1 mouse_genomes_project 8 127272954 127273061 + Gm26002 snRNA snRNA MGP_BALBcJ_T0089950.1 MGP_BALBcJ_G0033906.1 mouse_genomes_project 8 88975072 89072378 - MGP_BALBcJ_P0089950 Rpgrip1l protein_coding protein_coding MGP_BALBcJ_T0089951.1 MGP_BALBcJ_G0033906.1 mouse_genomes_project 8 88976996 89072339 - MGP_BALBcJ_P0089951 Rpgrip1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089952.1 MGP_BALBcJ_G0033906.1 mouse_genomes_project 8 88978221 89072443 - MGP_BALBcJ_P0089952 Rpgrip1l protein_coding unknown_likely_coding MGP_BALBcJ_T0089953.1 MGP_BALBcJ_G0033906.1 mouse_genomes_project 8 89028685 89035840 - Rpgrip1l protein_coding retained_intron MGP_BALBcJ_T0089954.1 MGP_BALBcJ_G0033906.1 mouse_genomes_project 8 89067093 89070161 - MGP_BALBcJ_P0089954 Rpgrip1l protein_coding protein_coding MGP_BALBcJ_T0010972.1 MGP_BALBcJ_G0009097.1 mouse_genomes_project 8 82794723 82794780 - Gm23388 miRNA miRNA MGP_BALBcJ_T0090549.1 MGP_BALBcJ_G0034125.1 mouse_genomes_project 8 110296573 110320340 - MGP_BALBcJ_P0090549 Adat1 protein_coding protein_coding MGP_BALBcJ_T0090550.1 MGP_BALBcJ_G0034125.1 mouse_genomes_project 8 110298993 110320380 - MGP_BALBcJ_P0090550 Adat1 protein_coding protein_coding MGP_BALBcJ_T0018459.1 MGP_BALBcJ_G0015667.1 mouse_genomes_project 8 123397647 123423240 + Gm16163 processed_transcript processed_transcript MGP_BALBcJ_T0090740.1 MGP_BALBcJ_G0034183.1 mouse_genomes_project 8 119630928 119633653 + MGP_BALBcJ_P0090740 Foxc2 protein_coding protein_coding MGP_BALBcJ_T0088919.1 MGP_BALBcJ_G0033599.1 mouse_genomes_project 8 54205207 54225197 + Fbxo8 protein_coding retained_intron MGP_BALBcJ_T0088920.1 MGP_BALBcJ_G0033599.1 mouse_genomes_project 8 54205275 54245655 + MGP_BALBcJ_P0088920 Fbxo8 protein_coding protein_coding MGP_BALBcJ_T0089799.1 MGP_BALBcJ_G0033860.1 mouse_genomes_project 8 82656296 82658137 - MGP_BALBcJ_P0089799 Junb protein_coding protein_coding MGP_BALBcJ_T0005302.1 MGP_BALBcJ_G0004498.1 mouse_genomes_project 8 8248075 8264741 + Gm15418 antisense antisense MGP_BALBcJ_T0090088.1 MGP_BALBcJ_G0033953.1 mouse_genomes_project 8 92828116 92850957 + MGP_BALBcJ_P0090088 Drc7 protein_coding unknown_likely_coding MGP_BALBcJ_T0090183.1 MGP_BALBcJ_G0033989.1 mouse_genomes_project 8 102749786 102760042 - MGP_BALBcJ_P0090183 Cdh16 protein_coding protein_coding MGP_BALBcJ_T0089530.1 MGP_BALBcJ_G0033783.1 mouse_genomes_project 8 76082289 76311175 + MGP_BALBcJ_P0089530 Slc10a7 protein_coding protein_coding MGP_BALBcJ_T0101378.1 MGP_BALBcJ_G0039414.1 mouse_genomes_project 8 15958583 15958686 + Gm22551 snoRNA snoRNA MGP_BALBcJ_T0005323.1 MGP_BALBcJ_G0004513.1 mouse_genomes_project 8 23439335 23459040 + 1700047A11Rik antisense antisense MGP_BALBcJ_T0005324.1 MGP_BALBcJ_G0004513.1 mouse_genomes_project 8 23439342 23446004 + 1700047A11Rik antisense antisense MGP_BALBcJ_T0009166.1 MGP_BALBcJ_G0007363.1 mouse_genomes_project 8 119514279 119514543 + Gm28324 lincRNA lincRNA MGP_BALBcJ_T0089372.1 MGP_BALBcJ_G0033732.1 mouse_genomes_project 8 69201246 69205817 - MGP_BALBcJ_P0089372 Tmem221 protein_coding protein_coding MGP_BALBcJ_T0088550.1 MGP_BALBcJ_G0033475.1 mouse_genomes_project 8 24398659 24414294 + MGP_BALBcJ_P0088550 Erlin2 protein_coding protein_coding MGP_BALBcJ_T0015935.1 MGP_BALBcJ_G0014032.1 mouse_genomes_project 8 28586375 28586841 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088270.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11167558 11912934 + MGP_BALBcJ_P0088270 Dlgap2 protein_coding protein_coding MGP_BALBcJ_T0088271.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11167568 11913506 + MGP_BALBcJ_P0088271 Dlgap2 protein_coding protein_coding MGP_BALBcJ_T0088272.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11252079 11912534 + MGP_BALBcJ_P0088272 Dlgap2 protein_coding protein_coding MGP_BALBcJ_T0088273.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11252079 11912934 + MGP_BALBcJ_P0088273 Dlgap2 protein_coding protein_coding MGP_BALBcJ_T0088274.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11448314 11575074 + Dlgap2 protein_coding processed_transcript MGP_BALBcJ_T0088275.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11448528 11598720 + Dlgap2 protein_coding processed_transcript MGP_BALBcJ_T0088276.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11448576 11897589 + Dlgap2 protein_coding retained_intron MGP_BALBcJ_T0088277.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11811351 11830870 + Dlgap2 protein_coding processed_transcript MGP_BALBcJ_T0088279.1 MGP_BALBcJ_G0033376.1 mouse_genomes_project 8 11847756 11913224 + Dlgap2 protein_coding processed_transcript MGP_BALBcJ_T0009158.1 MGP_BALBcJ_G0007355.1 mouse_genomes_project 8 108539272 108541487 - Gm26832 lincRNA lincRNA MGP_BALBcJ_T0089311.1 MGP_BALBcJ_G0033717.1 mouse_genomes_project 8 68900423 68996803 + MGP_BALBcJ_P0089311 Myo9b protein_coding protein_coding MGP_BALBcJ_T0089312.1 MGP_BALBcJ_G0033717.1 mouse_genomes_project 8 68900423 68996803 + MGP_BALBcJ_P0089312 Myo9b protein_coding protein_coding MGP_BALBcJ_T0089313.1 MGP_BALBcJ_G0033717.1 mouse_genomes_project 8 68900423 68996803 + MGP_BALBcJ_P0089313 Myo9b protein_coding protein_coding MGP_BALBcJ_T0089314.1 MGP_BALBcJ_G0033717.1 mouse_genomes_project 8 68900479 68969685 + MGP_BALBcJ_P0089314 Myo9b protein_coding unknown_likely_coding MGP_BALBcJ_T0089315.1 MGP_BALBcJ_G0033717.1 mouse_genomes_project 8 68978579 68996808 + MGP_BALBcJ_P0089315 Myo9b protein_coding unknown_likely_coding MGP_BALBcJ_T0090644.1 MGP_BALBcJ_G0034160.1 mouse_genomes_project 8 118052021 118076773 + MGP_BALBcJ_P0090644 Dnaaf1 protein_coding protein_coding MGP_BALBcJ_T0090089.1 MGP_BALBcJ_G0033954.1 mouse_genomes_project 8 92854015 92872714 + MGP_BALBcJ_P0090089 Katnb1 protein_coding protein_coding MGP_BALBcJ_T0089048.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 65911155 66279965 - MGP_BALBcJ_P0089048 Csgalnact1 protein_coding protein_coding MGP_BALBcJ_T0089049.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 65912340 66279933 - MGP_BALBcJ_P0089049 Csgalnact1 protein_coding protein_coding MGP_BALBcJ_T0089050.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 65944626 66279921 - MGP_BALBcJ_P0089050 Csgalnact1 protein_coding protein_coding MGP_BALBcJ_T0089051.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 66016491 66279934 - Csgalnact1 protein_coding processed_transcript MGP_BALBcJ_T0089052.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 66113120 66279933 - Csgalnact1 protein_coding processed_transcript MGP_BALBcJ_T0089053.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 66113219 66279934 - Csgalnact1 protein_coding processed_transcript MGP_BALBcJ_T0089054.1 MGP_BALBcJ_G0033639.1 mouse_genomes_project 8 66196872 66279934 - Csgalnact1 protein_coding processed_transcript MGP_BALBcJ_T0089136.1 MGP_BALBcJ_G0033665.1 mouse_genomes_project 8 67652655 67688734 + MGP_BALBcJ_P0089136 Sugp1 protein_coding protein_coding MGP_BALBcJ_T0088343.1 MGP_BALBcJ_G0033404.1 mouse_genomes_project 8 18175810 18180861 + MGP_BALBcJ_P0088343 Defb33 protein_coding protein_coding MGP_BALBcJ_T0099020.1 MGP_BALBcJ_G0037062.1 mouse_genomes_project 8 65360960 65361350 - sense_intronic sense_intronic MGP_BALBcJ_T0089817.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82755834 82759108 + MGP_BALBcJ_P0089817 Dhps protein_coding protein_coding MGP_BALBcJ_T0089818.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82755873 82759102 + MGP_BALBcJ_P0089818 Dhps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089819.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82755883 82756888 + Dhps protein_coding retained_intron MGP_BALBcJ_T0089820.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82756378 82757524 + Dhps protein_coding retained_intron MGP_BALBcJ_T0089821.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82756997 82757956 + Dhps protein_coding retained_intron MGP_BALBcJ_T0089822.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82756997 82759097 + Dhps protein_coding retained_intron MGP_BALBcJ_T0089823.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82757523 82758394 + Dhps protein_coding retained_intron MGP_BALBcJ_T0089824.1 MGP_BALBcJ_G0033868.1 mouse_genomes_project 8 82758644 82759097 + Dhps protein_coding retained_intron MGP_BALBcJ_T0102838.1 MGP_BALBcJ_G0040653.1 mouse_genomes_project 8 16557054 16558934 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009110.1 MGP_BALBcJ_G0007327.1 mouse_genomes_project 8 84818070 84903501 + Gm27246 lincRNA lincRNA MGP_BALBcJ_T0091019.1 MGP_BALBcJ_G0034262.1 mouse_genomes_project 8 124328446 124474315 - MGP_BALBcJ_P0091019 Pcnx2 protein_coding protein_coding MGP_BALBcJ_T0091020.1 MGP_BALBcJ_G0034262.1 mouse_genomes_project 8 124328447 124416200 - Pcnx2 protein_coding retained_intron MGP_BALBcJ_T0091021.1 MGP_BALBcJ_G0034262.1 mouse_genomes_project 8 124328449 124351059 - Pcnx2 protein_coding retained_intron MGP_BALBcJ_T0091022.1 MGP_BALBcJ_G0034262.1 mouse_genomes_project 8 124403417 124405288 - Pcnx2 protein_coding retained_intron MGP_BALBcJ_T0091023.1 MGP_BALBcJ_G0034262.1 mouse_genomes_project 8 124413956 124474315 - MGP_BALBcJ_P0091023 Pcnx2 protein_coding protein_coding MGP_BALBcJ_T0091024.1 MGP_BALBcJ_G0034262.1 mouse_genomes_project 8 124437532 124474273 - Pcnx2 protein_coding processed_transcript MGP_BALBcJ_T0099025.1 MGP_BALBcJ_G0037067.1 mouse_genomes_project 8 121577616 121579753 + 2810013P06Rik sense_intronic sense_intronic MGP_BALBcJ_T0009152.1 MGP_BALBcJ_G0007351.1 mouse_genomes_project 8 104429686 104618055 - Gm26786 lincRNA lincRNA MGP_BALBcJ_T0089047.1 MGP_BALBcJ_G0033638.1 mouse_genomes_project 8 65830594 65900625 + MGP_BALBcJ_P0089047 Sh2d4a protein_coding protein_coding MGP_BALBcJ_T0088815.1 MGP_BALBcJ_G0033566.1 mouse_genomes_project 8 43812983 43815605 - MGP_BALBcJ_P0088815 Helt protein_coding protein_coding MGP_BALBcJ_T0088109.1 MGP_BALBcJ_G0033320.1 mouse_genomes_project 8 2090926 2110380 - MGP_BALBcJ_P0088109 Slc10a2 protein_coding protein_coding MGP_BALBcJ_T0089587.1 MGP_BALBcJ_G0033804.1 mouse_genomes_project 8 80914003 80922034 + MGP_BALBcJ_P0089587 Ucp1 protein_coding protein_coding MGP_BALBcJ_T0088638.1 MGP_BALBcJ_G0033513.1 mouse_genomes_project 8 32755776 32768612 + MGP_BALBcJ_P0088638 Ppp1r3b protein_coding protein_coding MGP_BALBcJ_T0102837.1 MGP_BALBcJ_G0040652.1 mouse_genomes_project 8 16490001 19043059 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0088606.1 MGP_BALBcJ_G0033504.1 mouse_genomes_project 8 31092914 31098583 - MGP_BALBcJ_P0088606 Smim18 protein_coding protein_coding MGP_BALBcJ_T0088339.1 MGP_BALBcJ_G0033401.1 mouse_genomes_project 8 16524951 16525164 - MGP_BALBcJ_P0088339 Defb8 protein_coding protein_coding MGP_BALBcJ_T0010931.1 MGP_BALBcJ_G0009056.1 mouse_genomes_project 8 10950992 10951086 + miRNA miRNA MGP_BALBcJ_T0005329.1 MGP_BALBcJ_G0004517.1 mouse_genomes_project 8 38488839 38500903 + Gm16193 antisense antisense MGP_BALBcJ_T0089423.1 MGP_BALBcJ_G0033745.1 mouse_genomes_project 8 69619540 69631360 + MGP_BALBcJ_P0089423 Zfp617 protein_coding protein_coding MGP_BALBcJ_T0089034.1 MGP_BALBcJ_G0033634.1 mouse_genomes_project 8 65041812 65043159 + MGP_BALBcJ_P0089034 Nat1 protein_coding protein_coding MGP_BALBcJ_T0099019.1 MGP_BALBcJ_G0037061.1 mouse_genomes_project 8 31238547 31239519 - Gm26978 sense_intronic sense_intronic MGP_BALBcJ_T0088520.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23167531 23191597 - MGP_BALBcJ_P0088520 Ash2l protein_coding protein_coding MGP_BALBcJ_T0088521.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23167865 23191580 - MGP_BALBcJ_P0088521 Ash2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088522.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23168211 23191587 - MGP_BALBcJ_P0088522 Ash2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088523.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23168741 23191575 - MGP_BALBcJ_P0088523 Ash2l protein_coding protein_coding MGP_BALBcJ_T0088524.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23174087 23174914 - Ash2l protein_coding retained_intron MGP_BALBcJ_T0088525.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23174482 23181839 - Ash2l protein_coding retained_intron MGP_BALBcJ_T0088526.1 MGP_BALBcJ_G0033466.1 mouse_genomes_project 8 23178331 23181295 - Ash2l protein_coding processed_transcript MGP_BALBcJ_T0101371.1 MGP_BALBcJ_G0039407.1 mouse_genomes_project 8 10950998 10951128 + Gm24698 snoRNA snoRNA MGP_BALBcJ_T0090164.1 MGP_BALBcJ_G0033984.1 mouse_genomes_project 8 102550093 102576544 - MGP_BALBcJ_P0090164 Dync1li2 protein_coding protein_coding MGP_BALBcJ_T0088722.1 MGP_BALBcJ_G0033539.1 mouse_genomes_project 8 38667241 38761525 + MGP_BALBcJ_P0088722 Pcm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0088723.1 MGP_BALBcJ_G0033539.1 mouse_genomes_project 8 38667305 38763611 + MGP_BALBcJ_P0088723 Pcm1 protein_coding protein_coding MGP_BALBcJ_T0089986.1 MGP_BALBcJ_G0033920.1 mouse_genomes_project 8 91031942 91055373 - MGP_BALBcJ_P0089986 Ces1f protein_coding protein_coding MGP_BALBcJ_T0089987.1 MGP_BALBcJ_G0033920.1 mouse_genomes_project 8 91032294 91034446 - Ces1f protein_coding retained_intron MGP_BALBcJ_T0089988.1 MGP_BALBcJ_G0033920.1 mouse_genomes_project 8 91041079 91042971 - Ces1f protein_coding retained_intron MGP_BALBcJ_T0089989.1 MGP_BALBcJ_G0033920.1 mouse_genomes_project 8 91041531 91043098 - Ces1f protein_coding retained_intron MGP_BALBcJ_T0089990.1 MGP_BALBcJ_G0033920.1 mouse_genomes_project 8 91049619 91051042 - Ces1f protein_coding retained_intron MGP_BALBcJ_T0089991.1 MGP_BALBcJ_G0033920.1 mouse_genomes_project 8 91049928 91055353 - MGP_BALBcJ_P0089991 Ces1f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089137.1 MGP_BALBcJ_G0033666.1 mouse_genomes_project 8 67689694 67696792 + MGP_BALBcJ_P0089137 Tm6sf2 protein_coding protein_coding MGP_BALBcJ_T0089138.1 MGP_BALBcJ_G0033666.1 mouse_genomes_project 8 67689702 67696778 + MGP_BALBcJ_P0089138 Tm6sf2 protein_coding protein_coding MGP_BALBcJ_T0089139.1 MGP_BALBcJ_G0033666.1 mouse_genomes_project 8 67691054 67692440 + Tm6sf2 protein_coding retained_intron MGP_BALBcJ_T0089140.1 MGP_BALBcJ_G0033666.1 mouse_genomes_project 8 67692154 67694855 + Tm6sf2 protein_coding retained_intron MGP_BALBcJ_T0089141.1 MGP_BALBcJ_G0033666.1 mouse_genomes_project 8 67694132 67695346 + Tm6sf2 protein_coding retained_intron MGP_BALBcJ_T0088944.1 MGP_BALBcJ_G0033609.1 mouse_genomes_project 8 58444658 58462249 + MGP_BALBcJ_P0088944 Hpf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088945.1 MGP_BALBcJ_G0033609.1 mouse_genomes_project 8 58444685 58462247 + MGP_BALBcJ_P0088945 Hpf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088946.1 MGP_BALBcJ_G0033609.1 mouse_genomes_project 8 58444691 58462254 + MGP_BALBcJ_P0088946 Hpf1 protein_coding protein_coding MGP_BALBcJ_T0088947.1 MGP_BALBcJ_G0033609.1 mouse_genomes_project 8 58444691 58460659 + MGP_BALBcJ_P0088947 Hpf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088948.1 MGP_BALBcJ_G0033609.1 mouse_genomes_project 8 58444729 58451293 + Hpf1 protein_coding retained_intron MGP_BALBcJ_T0018417.1 MGP_BALBcJ_G0015650.1 mouse_genomes_project 8 38652056 38654760 + Gm16348 processed_transcript processed_transcript MGP_BALBcJ_T0018418.1 MGP_BALBcJ_G0015650.1 mouse_genomes_project 8 38652057 38654392 + Gm16348 processed_transcript processed_transcript MGP_BALBcJ_T0101392.1 MGP_BALBcJ_G0039428.1 mouse_genomes_project 8 44963843 44963977 + Gm22857 snoRNA snoRNA MGP_BALBcJ_T0088130.1 MGP_BALBcJ_G0033334.1 mouse_genomes_project 8 8514897 8541137 - MGP_BALBcJ_P0088130 Rab20 protein_coding protein_coding MGP_BALBcJ_T0089567.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 78959543 79381916 + MGP_BALBcJ_P0089567 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089568.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 78959545 79695018 + MGP_BALBcJ_P0089568 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089569.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 78959549 79749326 + MGP_BALBcJ_P0089569 Inpp4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089570.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 78959549 79751578 + MGP_BALBcJ_P0089570 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089571.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 78959549 79749094 + MGP_BALBcJ_P0089571 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089572.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79350552 79642626 + MGP_BALBcJ_P0089572 Inpp4b protein_coding unknown_likely_coding MGP_BALBcJ_T0089573.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79353008 79749099 + MGP_BALBcJ_P0089573 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089574.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79403396 79445267 + Inpp4b protein_coding processed_transcript MGP_BALBcJ_T0089575.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79406291 79518299 + Inpp4b protein_coding processed_transcript MGP_BALBcJ_T0089576.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79408722 79695018 + MGP_BALBcJ_P0089576 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089577.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79478704 79583406 + Inpp4b protein_coding processed_transcript MGP_BALBcJ_T0089578.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79490353 79749108 + MGP_BALBcJ_P0089578 Inpp4b protein_coding protein_coding MGP_BALBcJ_T0089579.1 MGP_BALBcJ_G0033798.1 mouse_genomes_project 8 79524736 79536883 + Inpp4b protein_coding processed_transcript MGP_BALBcJ_T0089630.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81547616 81586931 + MGP_BALBcJ_P0089630 Adgrl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089631.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81547709 81586931 + MGP_BALBcJ_P0089631 Adgrl1 protein_coding protein_coding MGP_BALBcJ_T0089632.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81547714 81588872 + MGP_BALBcJ_P0089632 Adgrl1 protein_coding protein_coding MGP_BALBcJ_T0089633.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81547724 81586906 + MGP_BALBcJ_P0089633 Adgrl1 protein_coding protein_coding MGP_BALBcJ_T0089634.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81547724 81586906 + MGP_BALBcJ_P0089634 Adgrl1 protein_coding protein_coding MGP_BALBcJ_T0089635.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81570028 81577011 + Adgrl1 protein_coding processed_transcript MGP_BALBcJ_T0089637.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81581535 81584413 + Adgrl1 protein_coding retained_intron MGP_BALBcJ_T0089638.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81583071 81584746 + Adgrl1 protein_coding retained_intron MGP_BALBcJ_T0089639.1 MGP_BALBcJ_G0033817.1 mouse_genomes_project 8 81584572 81585783 + MGP_BALBcJ_P0089639 Adgrl1 protein_coding protein_coding MGP_BALBcJ_T0015944.1 MGP_BALBcJ_G0014041.1 mouse_genomes_project 8 39358602 39362221 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088640.1 MGP_BALBcJ_G0033515.1 mouse_genomes_project 8 32969479 33059994 + MGP_BALBcJ_P0088640 Mfhas1 protein_coding protein_coding MGP_BALBcJ_T0088641.1 MGP_BALBcJ_G0033515.1 mouse_genomes_project 8 32989023 33057583 + Mfhas1 protein_coding processed_transcript MGP_BALBcJ_T0101375.1 MGP_BALBcJ_G0039411.1 mouse_genomes_project 8 15291194 15291304 - Gm25665 snoRNA snoRNA MGP_BALBcJ_T0101391.1 MGP_BALBcJ_G0039427.1 mouse_genomes_project 8 43087855 43087987 - Gm23604 snoRNA snoRNA MGP_BALBcJ_T0088831.1 MGP_BALBcJ_G0033569.1 mouse_genomes_project 8 44099468 44141430 - MGP_BALBcJ_P0088831 Primpol protein_coding protein_coding MGP_BALBcJ_T0088832.1 MGP_BALBcJ_G0033569.1 mouse_genomes_project 8 44100051 44141430 - Primpol protein_coding retained_intron MGP_BALBcJ_T0088833.1 MGP_BALBcJ_G0033569.1 mouse_genomes_project 8 44110514 44116950 - Primpol protein_coding processed_transcript MGP_BALBcJ_T0088834.1 MGP_BALBcJ_G0033569.1 mouse_genomes_project 8 44129387 44137245 - MGP_BALBcJ_P0088834 Primpol protein_coding protein_coding MGP_BALBcJ_T0088835.1 MGP_BALBcJ_G0033569.1 mouse_genomes_project 8 44135007 44141442 - Primpol protein_coding retained_intron MGP_BALBcJ_T0088678.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37886753 37905790 - MGP_BALBcJ_P0088678 Cnot7 protein_coding protein_coding MGP_BALBcJ_T0088679.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37886755 37909885 - MGP_BALBcJ_P0088679 Cnot7 protein_coding protein_coding MGP_BALBcJ_T0088680.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37886756 37905754 - Cnot7 protein_coding retained_intron MGP_BALBcJ_T0088681.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37886760 37905754 - MGP_BALBcJ_P0088681 Cnot7 protein_coding protein_coding MGP_BALBcJ_T0088682.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37887250 37905339 - MGP_BALBcJ_P0088682 Cnot7 protein_coding protein_coding MGP_BALBcJ_T0088683.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37888228 37895155 - Cnot7 protein_coding processed_transcript MGP_BALBcJ_T0088684.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37889845 37901746 - Cnot7 protein_coding retained_intron MGP_BALBcJ_T0088686.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37894815 37901663 - Cnot7 protein_coding processed_transcript MGP_BALBcJ_T0088687.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37901395 37905758 - Cnot7 protein_coding processed_transcript MGP_BALBcJ_T0088688.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37904064 37909873 - Cnot7 protein_coding processed_transcript MGP_BALBcJ_T0088689.1 MGP_BALBcJ_G0033529.1 mouse_genomes_project 8 37904144 37905339 - Cnot7 protein_coding processed_transcript MGP_BALBcJ_T0089645.1 MGP_BALBcJ_G0033822.1 mouse_genomes_project 8 81647419 81650704 + MGP_BALBcJ_P0089645 1700067K01Rik protein_coding protein_coding MGP_BALBcJ_T0089646.1 MGP_BALBcJ_G0033822.1 mouse_genomes_project 8 81647621 81650603 + MGP_BALBcJ_P0089646 1700067K01Rik protein_coding protein_coding MGP_BALBcJ_T0089647.1 MGP_BALBcJ_G0033822.1 mouse_genomes_project 8 81647621 81650597 + MGP_BALBcJ_P0089647 1700067K01Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089648.1 MGP_BALBcJ_G0033822.1 mouse_genomes_project 8 81648262 81649221 + 1700067K01Rik protein_coding retained_intron MGP_BALBcJ_T0088996.1 MGP_BALBcJ_G0033618.1 mouse_genomes_project 8 61483405 61508810 - MGP_BALBcJ_P0088996 Sgol2b protein_coding protein_coding MGP_BALBcJ_T0101376.1 MGP_BALBcJ_G0039412.1 mouse_genomes_project 8 15531272 15531403 - Gm24469 snoRNA snoRNA MGP_BALBcJ_T0011705.1 MGP_BALBcJ_G0009830.1 mouse_genomes_project 8 88942316 88942581 - Gm23408 misc_RNA misc_RNA MGP_BALBcJ_T0089962.1 MGP_BALBcJ_G0033908.1 mouse_genomes_project 8 89560331 89563715 - MGP_BALBcJ_P0089962 Irx3 protein_coding protein_coding MGP_BALBcJ_T0089963.1 MGP_BALBcJ_G0033908.1 mouse_genomes_project 8 89560331 89563714 - MGP_BALBcJ_P0089963 Irx3 protein_coding protein_coding MGP_BALBcJ_T0101402.1 MGP_BALBcJ_G0039438.1 mouse_genomes_project 8 64448785 64448914 - Gm25275 snoRNA snoRNA MGP_BALBcJ_T0089153.1 MGP_BALBcJ_G0033672.1 mouse_genomes_project 8 67769332 67783854 + MGP_BALBcJ_P0089153 protein_coding protein_coding MGP_BALBcJ_T0089154.1 MGP_BALBcJ_G0033672.1 mouse_genomes_project 8 67769332 67783854 + MGP_BALBcJ_P0089154 protein_coding protein_coding MGP_BALBcJ_T0089155.1 MGP_BALBcJ_G0033672.1 mouse_genomes_project 8 67769335 67783853 + MGP_BALBcJ_P0089155 protein_coding protein_coding MGP_BALBcJ_T0089156.1 MGP_BALBcJ_G0033672.1 mouse_genomes_project 8 67769335 67783853 + MGP_BALBcJ_P0089156 protein_coding protein_coding MGP_BALBcJ_T0089674.1 MGP_BALBcJ_G0033835.1 mouse_genomes_project 8 81860874 81888112 - MGP_BALBcJ_P0089674 Zswim4 protein_coding protein_coding MGP_BALBcJ_T0088423.1 MGP_BALBcJ_G0033438.1 mouse_genomes_project 8 20475239 20480937 + MGP_BALBcJ_P0088423 Nkx6-3 protein_coding protein_coding MGP_BALBcJ_T0088588.1 MGP_BALBcJ_G0033497.1 mouse_genomes_project 8 30742526 30773641 + MGP_BALBcJ_P0088588 Purg protein_coding protein_coding MGP_BALBcJ_T0088589.1 MGP_BALBcJ_G0033497.1 mouse_genomes_project 8 30742526 30743733 + MGP_BALBcJ_P0088589 Purg protein_coding protein_coding MGP_BALBcJ_T0088157.1 MGP_BALBcJ_G0033343.1 mouse_genomes_project 8 9474584 9479243 + MGP_BALBcJ_P0088157 Sox1 protein_coding protein_coding MGP_BALBcJ_T0090192.1 MGP_BALBcJ_G0033993.1 mouse_genomes_project 8 102960011 102984758 + MGP_BALBcJ_P0090192 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088851.1 MGP_BALBcJ_G0033576.1 mouse_genomes_project 8 45058809 45079541 + MGP_BALBcJ_P0088851 Rwdd4a protein_coding protein_coding MGP_BALBcJ_T0088852.1 MGP_BALBcJ_G0033576.1 mouse_genomes_project 8 45058809 45077995 + MGP_BALBcJ_P0088852 Rwdd4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088853.1 MGP_BALBcJ_G0033576.1 mouse_genomes_project 8 45058831 45069864 + MGP_BALBcJ_P0088853 Rwdd4a protein_coding protein_coding MGP_BALBcJ_T0088854.1 MGP_BALBcJ_G0033576.1 mouse_genomes_project 8 45074623 45078006 + Rwdd4a protein_coding processed_transcript MGP_BALBcJ_T0088855.1 MGP_BALBcJ_G0033576.1 mouse_genomes_project 8 45077173 45079671 + Rwdd4a protein_coding retained_intron MGP_BALBcJ_T0088735.1 MGP_BALBcJ_G0033547.1 mouse_genomes_project 8 41133479 41141076 - MGP_BALBcJ_P0088735 Gm5346 protein_coding protein_coding MGP_BALBcJ_T0098662.1 MGP_BALBcJ_G0036716.1 mouse_genomes_project 8 61729477 61729598 + Gm22586 rRNA rRNA MGP_BALBcJ_T0090931.1 MGP_BALBcJ_G0034230.1 mouse_genomes_project 8 122033320 122062065 + MGP_BALBcJ_P0090931 Afg3l1 protein_coding protein_coding MGP_BALBcJ_T0090932.1 MGP_BALBcJ_G0034230.1 mouse_genomes_project 8 122033320 122062065 + MGP_BALBcJ_P0090932 Afg3l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090933.1 MGP_BALBcJ_G0034230.1 mouse_genomes_project 8 122033357 122037391 + Afg3l1 protein_coding retained_intron MGP_BALBcJ_T0090934.1 MGP_BALBcJ_G0034230.1 mouse_genomes_project 8 122036463 122048117 + Afg3l1 protein_coding processed_transcript MGP_BALBcJ_T0090935.1 MGP_BALBcJ_G0034230.1 mouse_genomes_project 8 122051111 122057084 + Afg3l1 protein_coding retained_intron MGP_BALBcJ_T0090936.1 MGP_BALBcJ_G0034230.1 mouse_genomes_project 8 122059234 122059764 + Afg3l1 protein_coding retained_intron MGP_BALBcJ_T0090712.1 MGP_BALBcJ_G0034179.1 mouse_genomes_project 8 119167435 119173389 + MGP_BALBcJ_P0090712 Cox4i1 protein_coding protein_coding MGP_BALBcJ_T0090713.1 MGP_BALBcJ_G0034179.1 mouse_genomes_project 8 119167441 119168997 + Cox4i1 protein_coding retained_intron MGP_BALBcJ_T0090714.1 MGP_BALBcJ_G0034179.1 mouse_genomes_project 8 119167516 119173221 + MGP_BALBcJ_P0090714 Cox4i1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090715.1 MGP_BALBcJ_G0034179.1 mouse_genomes_project 8 119171765 119173289 + Cox4i1 protein_coding retained_intron MGP_BALBcJ_T0090716.1 MGP_BALBcJ_G0034179.1 mouse_genomes_project 8 119172327 119173383 + Cox4i1 protein_coding retained_intron MGP_BALBcJ_T0098404.1 MGP_BALBcJ_G0036458.1 mouse_genomes_project 8 116259217 116260390 + pseudogene pseudogene MGP_BALBcJ_T0088965.1 MGP_BALBcJ_G0033612.1 mouse_genomes_project 8 58775772 58951502 + MGP_BALBcJ_P0088965 Sh3rf1 protein_coding protein_coding MGP_BALBcJ_T0089553.1 MGP_BALBcJ_G0033790.1 mouse_genomes_project 8 77290810 77319373 - MGP_BALBcJ_P0089553 Abce1 protein_coding protein_coding MGP_BALBcJ_T0090576.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112822509 113749638 + MGP_BALBcJ_P0090576 Wwox protein_coding protein_coding MGP_BALBcJ_T0090577.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112822549 113105241 + MGP_BALBcJ_P0090577 Wwox protein_coding protein_coding MGP_BALBcJ_T0090578.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112822549 113261181 + MGP_BALBcJ_P0090578 Wwox protein_coding protein_coding MGP_BALBcJ_T0090579.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112822556 112836651 + Wwox protein_coding processed_transcript MGP_BALBcJ_T0090580.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112822556 112856751 + MGP_BALBcJ_P0090580 Wwox protein_coding protein_coding MGP_BALBcJ_T0090581.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112831064 112896875 + Wwox protein_coding processed_transcript MGP_BALBcJ_T0090582.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 112991683 113092543 + Wwox protein_coding processed_transcript MGP_BALBcJ_T0090583.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 113098343 113749073 + Wwox protein_coding processed_transcript MGP_BALBcJ_T0090584.1 MGP_BALBcJ_G0034135.1 mouse_genomes_project 8 113098343 113410408 + Wwox protein_coding processed_transcript MGP_BALBcJ_T0090198.1 MGP_BALBcJ_G0033997.1 mouse_genomes_project 8 103101106 103108890 + MGP_BALBcJ_P0090198 Ces2g protein_coding protein_coding MGP_BALBcJ_T0090338.1 MGP_BALBcJ_G0034051.1 mouse_genomes_project 8 104340886 104355235 + MGP_BALBcJ_P0090338 Pla2g15 protein_coding protein_coding MGP_BALBcJ_T0090650.1 MGP_BALBcJ_G0034162.1 mouse_genomes_project 8 118091282 118095463 + MGP_BALBcJ_P0090650 Adad2 protein_coding protein_coding MGP_BALBcJ_T0009150.1 MGP_BALBcJ_G0007350.1 mouse_genomes_project 8 103800249 103814067 - Gm5914 lincRNA lincRNA MGP_BALBcJ_T0009151.1 MGP_BALBcJ_G0007350.1 mouse_genomes_project 8 103800263 103814202 - Gm5914 lincRNA lincRNA MGP_BALBcJ_T0015971.1 MGP_BALBcJ_G0014068.1 mouse_genomes_project 8 80976368 80976846 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090161.1 MGP_BALBcJ_G0033981.1 mouse_genomes_project 8 102451714 102460473 + MGP_BALBcJ_P0090161 Cmtm2b protein_coding protein_coding MGP_BALBcJ_T0090951.1 MGP_BALBcJ_G0034240.1 mouse_genomes_project 8 122564809 122593367 - MGP_BALBcJ_P0090951 Taf5l protein_coding protein_coding MGP_BALBcJ_T0090952.1 MGP_BALBcJ_G0034240.1 mouse_genomes_project 8 122564809 122592560 - MGP_BALBcJ_P0090952 Taf5l protein_coding protein_coding MGP_BALBcJ_T0091011.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124306899 124322236 + Ntpcr protein_coding processed_transcript MGP_BALBcJ_T0091012.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124306964 124324746 + MGP_BALBcJ_P0091012 Ntpcr protein_coding protein_coding MGP_BALBcJ_T0091013.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124306968 124315073 + Ntpcr protein_coding processed_transcript MGP_BALBcJ_T0091014.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124310026 124324971 + Ntpcr protein_coding processed_transcript MGP_BALBcJ_T0091015.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124311139 124325172 + MGP_BALBcJ_P0091015 Ntpcr protein_coding protein_coding MGP_BALBcJ_T0091016.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124311169 124313266 + Ntpcr protein_coding retained_intron MGP_BALBcJ_T0091017.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124311174 124316116 + MGP_BALBcJ_P0091017 Ntpcr protein_coding protein_coding MGP_BALBcJ_T0091018.1 MGP_BALBcJ_G0034261.1 mouse_genomes_project 8 124312771 124324934 + MGP_BALBcJ_P0091018 Ntpcr protein_coding protein_coding MGP_BALBcJ_T0090997.1 MGP_BALBcJ_G0034255.1 mouse_genomes_project 8 123457622 123463554 + MGP_BALBcJ_P0090997 Sprtn protein_coding protein_coding MGP_BALBcJ_T0088469.1 MGP_BALBcJ_G0033453.1 mouse_genomes_project 8 22354064 22359474 + MGP_BALBcJ_P0088469 Tm2d2 protein_coding protein_coding MGP_BALBcJ_T0002327.1 MGP_BALBcJ_G0002238.1 mouse_genomes_project 8 81851059 81853239 + TEC TEC MGP_BALBcJ_T0090366.1 MGP_BALBcJ_G0034066.1 mouse_genomes_project 8 105265117 105267603 - MGP_BALBcJ_P0090366 Pdf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090369.1 MGP_BALBcJ_G0034066.1 mouse_genomes_project 8 105266936 105271563 - MGP_BALBcJ_P0090369 Pdf protein_coding protein_coding MGP_BALBcJ_T0088647.1 MGP_BALBcJ_G0033519.1 mouse_genomes_project 8 33609180 33645538 - MGP_BALBcJ_P0088647 Lonrf1 protein_coding protein_coding MGP_BALBcJ_T0101431.1 MGP_BALBcJ_G0039467.1 mouse_genomes_project 8 121645785 121645871 + Snord68 snoRNA snoRNA MGP_BALBcJ_T0089874.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84307165 84394990 + MGP_BALBcJ_P0089874 Lonp2 protein_coding protein_coding MGP_BALBcJ_T0089875.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84307165 84402182 + MGP_BALBcJ_P0089875 Lonp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089876.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84307209 84325616 + Lonp2 protein_coding processed_transcript MGP_BALBcJ_T0089877.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84307227 84394990 + MGP_BALBcJ_P0089877 Lonp2 protein_coding protein_coding MGP_BALBcJ_T0089878.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84315177 84347923 + Lonp2 protein_coding processed_transcript MGP_BALBcJ_T0089879.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84335518 84394991 + MGP_BALBcJ_P0089879 Lonp2 protein_coding protein_coding MGP_BALBcJ_T0089880.1 MGP_BALBcJ_G0033884.1 mouse_genomes_project 8 84335518 84394991 + MGP_BALBcJ_P0089880 Lonp2 protein_coding protein_coding MGP_BALBcJ_T0088310.1 MGP_BALBcJ_G0033384.1 mouse_genomes_project 8 15611034 15825788 + MGP_BALBcJ_P0088310 Mcph1 protein_coding protein_coding MGP_BALBcJ_T0088311.1 MGP_BALBcJ_G0033384.1 mouse_genomes_project 8 15611067 15733792 + MGP_BALBcJ_P0088311 Mcph1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088312.1 MGP_BALBcJ_G0033384.1 mouse_genomes_project 8 15611481 15708151 + Mcph1 protein_coding retained_intron MGP_BALBcJ_T0088313.1 MGP_BALBcJ_G0033384.1 mouse_genomes_project 8 15611487 15649013 + MGP_BALBcJ_P0088313 Mcph1 protein_coding protein_coding MGP_BALBcJ_T0088314.1 MGP_BALBcJ_G0033384.1 mouse_genomes_project 8 15641674 15647992 + MGP_BALBcJ_P0088314 Mcph1 protein_coding protein_coding MGP_BALBcJ_T0088315.1 MGP_BALBcJ_G0033384.1 mouse_genomes_project 8 15648703 15670500 + MGP_BALBcJ_P0088315 Mcph1 protein_coding protein_coding MGP_BALBcJ_T0088263.1 MGP_BALBcJ_G0033373.1 mouse_genomes_project 8 11029738 11052479 - MGP_BALBcJ_P0088263 Tdrp protein_coding protein_coding MGP_BALBcJ_T0088264.1 MGP_BALBcJ_G0033373.1 mouse_genomes_project 8 11029859 11031117 - Tdrp protein_coding processed_transcript MGP_BALBcJ_T0088265.1 MGP_BALBcJ_G0033373.1 mouse_genomes_project 8 11031485 11039539 - Tdrp protein_coding processed_transcript MGP_BALBcJ_T0088266.1 MGP_BALBcJ_G0033373.1 mouse_genomes_project 8 11031842 11052734 - MGP_BALBcJ_P0088266 Tdrp protein_coding protein_coding MGP_BALBcJ_T0088267.1 MGP_BALBcJ_G0033373.1 mouse_genomes_project 8 11050317 11052445 - Tdrp protein_coding retained_intron MGP_BALBcJ_T0089728.1 MGP_BALBcJ_G0033844.1 mouse_genomes_project 8 82366570 82369828 + MGP_BALBcJ_P0089728 Lyl1 protein_coding protein_coding MGP_BALBcJ_T0088720.1 MGP_BALBcJ_G0033538.1 mouse_genomes_project 8 38626196 38649064 - MGP_BALBcJ_P0088720 Fgl1 protein_coding protein_coding MGP_BALBcJ_T0088721.1 MGP_BALBcJ_G0033538.1 mouse_genomes_project 8 38632376 38649061 - Fgl1 protein_coding retained_intron MGP_BALBcJ_T0091062.1 MGP_BALBcJ_G0034272.1 mouse_genomes_project 8 126983939 127131539 + MGP_BALBcJ_P0091062 Nrp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0088595.1 MGP_BALBcJ_G0033500.1 mouse_genomes_project 8 30950163 30970382 + MGP_BALBcJ_P0088595 Ppp2cb protein_coding protein_coding MGP_BALBcJ_T0100139.1 MGP_BALBcJ_G0038175.1 mouse_genomes_project 8 82980818 82980925 + Gm22336 snRNA snRNA MGP_BALBcJ_T0015921.1 MGP_BALBcJ_G0014018.1 mouse_genomes_project 8 12166483 12167506 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089231.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68118779 68121209 - 2810428I15Rik protein_coding retained_intron MGP_BALBcJ_T0089232.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68118782 68120600 - 2810428I15Rik protein_coding retained_intron MGP_BALBcJ_T0089233.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68118782 68120914 - 2810428I15Rik protein_coding processed_transcript MGP_BALBcJ_T0089234.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68118782 68121240 - MGP_BALBcJ_P0089234 2810428I15Rik protein_coding protein_coding MGP_BALBcJ_T0089235.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68118786 68121225 - MGP_BALBcJ_P0089235 2810428I15Rik protein_coding protein_coding MGP_BALBcJ_T0089236.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68118885 68120596 - 2810428I15Rik protein_coding retained_intron MGP_BALBcJ_T0089237.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68119732 68121187 - 2810428I15Rik protein_coding retained_intron MGP_BALBcJ_T0089238.1 MGP_BALBcJ_G0033687.1 mouse_genomes_project 8 68120338 68121201 - 2810428I15Rik protein_coding retained_intron MGP_BALBcJ_T0102841.1 MGP_BALBcJ_G0040656.1 mouse_genomes_project 8 66171164 66171464 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010992.1 MGP_BALBcJ_G0009117.1 mouse_genomes_project 8 108837127 108837208 - Gm44489 miRNA miRNA MGP_BALBcJ_T0089657.1 MGP_BALBcJ_G0033825.1 mouse_genomes_project 8 81676500 81691145 - MGP_BALBcJ_P0089657 Il27ra protein_coding protein_coding MGP_BALBcJ_T0088928.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 55403172 55590028 - MGP_BALBcJ_P0088928 Galntl6 protein_coding protein_coding MGP_BALBcJ_T0088929.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 55403180 56513477 - MGP_BALBcJ_P0088929 Galntl6 protein_coding protein_coding MGP_BALBcJ_T0088930.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 55424250 55473032 - Galntl6 protein_coding processed_transcript MGP_BALBcJ_T0088931.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 56033763 56512464 - Galntl6 protein_coding retained_intron MGP_BALBcJ_T0088932.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 56033849 56512413 - MGP_BALBcJ_P0088932 Galntl6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088933.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 56033969 56301439 - MGP_BALBcJ_P0088933 Galntl6 protein_coding protein_coding MGP_BALBcJ_T0088934.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 56096348 56301459 - Galntl6 protein_coding processed_transcript MGP_BALBcJ_T0088935.1 MGP_BALBcJ_G0033604.1 mouse_genomes_project 8 56135169 56512697 - MGP_BALBcJ_P0088935 Galntl6 protein_coding protein_coding MGP_BALBcJ_T0088990.1 MGP_BALBcJ_G0033617.1 mouse_genomes_project 8 60514023 60915435 + MGP_BALBcJ_P0088990 Spock3 protein_coding protein_coding MGP_BALBcJ_T0088991.1 MGP_BALBcJ_G0033617.1 mouse_genomes_project 8 60514246 60915443 + MGP_BALBcJ_P0088991 Spock3 protein_coding protein_coding MGP_BALBcJ_T0088992.1 MGP_BALBcJ_G0033617.1 mouse_genomes_project 8 60514375 60714043 + Spock3 protein_coding retained_intron MGP_BALBcJ_T0088993.1 MGP_BALBcJ_G0033617.1 mouse_genomes_project 8 60514375 60915686 + MGP_BALBcJ_P0088993 Spock3 protein_coding protein_coding MGP_BALBcJ_T0088994.1 MGP_BALBcJ_G0033617.1 mouse_genomes_project 8 60514814 60915677 + MGP_BALBcJ_P0088994 Spock3 protein_coding protein_coding MGP_BALBcJ_T0088995.1 MGP_BALBcJ_G0033617.1 mouse_genomes_project 8 60514939 60530749 + Spock3 protein_coding processed_transcript MGP_BALBcJ_T0089654.1 MGP_BALBcJ_G0033824.1 mouse_genomes_project 8 81667727 81675402 + Palm3 protein_coding retained_intron MGP_BALBcJ_T0089655.1 MGP_BALBcJ_G0033824.1 mouse_genomes_project 8 81667727 81676509 + MGP_BALBcJ_P0089655 Palm3 protein_coding protein_coding MGP_BALBcJ_T0089656.1 MGP_BALBcJ_G0033824.1 mouse_genomes_project 8 81672304 81673279 + Palm3 protein_coding retained_intron MGP_BALBcJ_T0089031.1 MGP_BALBcJ_G0033631.1 mouse_genomes_project 8 64205440 64213486 - MGP_BALBcJ_P0089031 Npy5r protein_coding protein_coding MGP_BALBcJ_T0090505.1 MGP_BALBcJ_G0034110.1 mouse_genomes_project 8 109448058 109561007 - MGP_BALBcJ_P0090505 Glg1 protein_coding protein_coding MGP_BALBcJ_T0090506.1 MGP_BALBcJ_G0034110.1 mouse_genomes_project 8 109451162 109471800 - MGP_BALBcJ_P0090506 Glg1 protein_coding protein_coding MGP_BALBcJ_T0090507.1 MGP_BALBcJ_G0034110.1 mouse_genomes_project 8 109451202 109560991 - MGP_BALBcJ_P0090507 Glg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090508.1 MGP_BALBcJ_G0034110.1 mouse_genomes_project 8 109451535 109561007 - MGP_BALBcJ_P0090508 Glg1 protein_coding protein_coding MGP_BALBcJ_T0009171.1 MGP_BALBcJ_G0007366.1 mouse_genomes_project 8 119773551 119875228 - Gm26815 lincRNA lincRNA MGP_BALBcJ_T0015918.1 MGP_BALBcJ_G0014015.1 mouse_genomes_project 8 10107779 10108049 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010950.1 MGP_BALBcJ_G0009075.1 mouse_genomes_project 8 68438735 68438793 + Mir7240 miRNA miRNA MGP_BALBcJ_T0089881.1 MGP_BALBcJ_G0033885.1 mouse_genomes_project 8 84402248 84424812 - MGP_BALBcJ_P0089881 protein_coding protein_coding MGP_BALBcJ_T0100136.1 MGP_BALBcJ_G0038172.1 mouse_genomes_project 8 75382911 75383017 + Gm23981 snRNA snRNA MGP_BALBcJ_T0010963.1 MGP_BALBcJ_G0009088.1 mouse_genomes_project 8 81828965 81829037 - Mir181d miRNA miRNA MGP_BALBcJ_T0088292.1 MGP_BALBcJ_G0033380.1 mouse_genomes_project 8 12080760 12103063 + MGP_BALBcJ_P0088292 Kbtbd11 protein_coding protein_coding MGP_BALBcJ_T0088293.1 MGP_BALBcJ_G0033380.1 mouse_genomes_project 8 12081051 12096823 + Kbtbd11 protein_coding processed_transcript MGP_BALBcJ_T0088294.1 MGP_BALBcJ_G0033380.1 mouse_genomes_project 8 12097019 12103063 + MGP_BALBcJ_P0088294 Kbtbd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088295.1 MGP_BALBcJ_G0033380.1 mouse_genomes_project 8 12102119 12102694 + Kbtbd11 protein_coding processed_transcript MGP_BALBcJ_T0100115.1 MGP_BALBcJ_G0038151.1 mouse_genomes_project 8 24809111 24809218 - Gm24410 snRNA snRNA MGP_BALBcJ_T0010979.1 MGP_BALBcJ_G0009104.1 mouse_genomes_project 8 92282536 92282596 + Mir7072 miRNA miRNA MGP_BALBcJ_T0088998.1 MGP_BALBcJ_G0033620.1 mouse_genomes_project 8 62164412 62265213 - MGP_BALBcJ_P0088998 Cpe protein_coding protein_coding MGP_BALBcJ_T0089934.1 MGP_BALBcJ_G0033902.1 mouse_genomes_project 8 88582691 88809096 + MGP_BALBcJ_P0089934 Chd9 protein_coding protein_coding MGP_BALBcJ_T0089935.1 MGP_BALBcJ_G0033902.1 mouse_genomes_project 8 88582691 88809096 + MGP_BALBcJ_P0089935 Chd9 protein_coding protein_coding MGP_BALBcJ_T0088124.1 MGP_BALBcJ_G0033331.1 mouse_genomes_project 8 8046738 8068216 - MGP_BALBcJ_P0088124 Irs2 protein_coding protein_coding MGP_BALBcJ_T0090435.1 MGP_BALBcJ_G0034088.1 mouse_genomes_project 8 108133045 108170634 + Phlpp2 protein_coding retained_intron MGP_BALBcJ_T0090436.1 MGP_BALBcJ_G0034088.1 mouse_genomes_project 8 108133122 108206589 + MGP_BALBcJ_P0090436 Phlpp2 protein_coding protein_coding MGP_BALBcJ_T0090054.1 MGP_BALBcJ_G0033943.1 mouse_genomes_project 8 92544754 92551688 + Cx3cl1 protein_coding processed_transcript MGP_BALBcJ_T0090055.1 MGP_BALBcJ_G0033943.1 mouse_genomes_project 8 92544754 92555161 + MGP_BALBcJ_P0090055 Cx3cl1 protein_coding protein_coding MGP_BALBcJ_T0090056.1 MGP_BALBcJ_G0033943.1 mouse_genomes_project 8 92544949 92552381 + MGP_BALBcJ_P0090056 Cx3cl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090057.1 MGP_BALBcJ_G0033943.1 mouse_genomes_project 8 92544970 92552765 + MGP_BALBcJ_P0090057 Cx3cl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100142.1 MGP_BALBcJ_G0038178.1 mouse_genomes_project 8 87326211 87326318 - Gm26331 snRNA snRNA MGP_BALBcJ_T0089443.1 MGP_BALBcJ_G0033750.1 mouse_genomes_project 8 69838466 69862487 + MGP_BALBcJ_P0089443 Rab8a protein_coding protein_coding MGP_BALBcJ_T0089444.1 MGP_BALBcJ_G0033750.1 mouse_genomes_project 8 69838579 69854439 + Rab8a protein_coding processed_transcript MGP_BALBcJ_T0089445.1 MGP_BALBcJ_G0033750.1 mouse_genomes_project 8 69838625 69854633 + Rab8a protein_coding retained_intron MGP_BALBcJ_T0087972.1 MGP_BALBcJ_G0033284.1 mouse_genomes_project 8 287694 392750 + MGP_BALBcJ_P0087972 Arhgef18 protein_coding protein_coding MGP_BALBcJ_T0087973.1 MGP_BALBcJ_G0033284.1 mouse_genomes_project 8 327246 386774 + Arhgef18 protein_coding retained_intron MGP_BALBcJ_T0087974.1 MGP_BALBcJ_G0033284.1 mouse_genomes_project 8 327313 364036 + Arhgef18 protein_coding processed_transcript MGP_BALBcJ_T0087975.1 MGP_BALBcJ_G0033284.1 mouse_genomes_project 8 327313 364404 + MGP_BALBcJ_P0087975 Arhgef18 protein_coding protein_coding MGP_BALBcJ_T0087976.1 MGP_BALBcJ_G0033284.1 mouse_genomes_project 8 373345 392740 + Arhgef18 protein_coding retained_intron MGP_BALBcJ_T0087977.1 MGP_BALBcJ_G0033284.1 mouse_genomes_project 8 386891 390408 + Arhgef18 protein_coding retained_intron MGP_BALBcJ_T0088891.1 MGP_BALBcJ_G0033590.1 mouse_genomes_project 8 52130935 52140501 - MGP_BALBcJ_P0088891 Spcs3 protein_coding protein_coding MGP_BALBcJ_T0009071.1 MGP_BALBcJ_G0007292.1 mouse_genomes_project 8 31386683 31393108 + Gm9951 lincRNA lincRNA MGP_BALBcJ_T0009072.1 MGP_BALBcJ_G0007292.1 mouse_genomes_project 8 31391881 31394314 + Gm9951 lincRNA lincRNA MGP_BALBcJ_T0090352.1 MGP_BALBcJ_G0034059.1 mouse_genomes_project 8 104805542 104874061 + MGP_BALBcJ_P0090352 Cdh1 protein_coding protein_coding MGP_BALBcJ_T0090353.1 MGP_BALBcJ_G0034059.1 mouse_genomes_project 8 104805570 104873177 + MGP_BALBcJ_P0090353 Cdh1 protein_coding protein_coding MGP_BALBcJ_T0090354.1 MGP_BALBcJ_G0034059.1 mouse_genomes_project 8 104806334 104855862 + Cdh1 protein_coding processed_transcript MGP_BALBcJ_T0091027.1 MGP_BALBcJ_G0034265.1 mouse_genomes_project 8 124879383 124976986 + MGP_BALBcJ_P0091027 Slc35f3 protein_coding protein_coding MGP_BALBcJ_T0005371.1 MGP_BALBcJ_G0004553.1 mouse_genomes_project 8 113025520 113028091 - Gm16117 antisense antisense MGP_BALBcJ_T0011011.1 MGP_BALBcJ_G0009136.1 mouse_genomes_project 8 126984493 126984573 + Mir1903 miRNA miRNA MGP_BALBcJ_T0088608.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31133975 31284178 - MGP_BALBcJ_P0088608 Rbpms protein_coding protein_coding MGP_BALBcJ_T0088609.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31133976 31284166 - MGP_BALBcJ_P0088609 Rbpms protein_coding protein_coding MGP_BALBcJ_T0088610.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31133979 31284131 - MGP_BALBcJ_P0088610 Rbpms protein_coding protein_coding MGP_BALBcJ_T0088611.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135115 31284141 - MGP_BALBcJ_P0088611 Rbpms protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088612.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135386 31196455 - MGP_BALBcJ_P0088612 Rbpms protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088613.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135395 31158100 - MGP_BALBcJ_P0088613 Rbpms protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088614.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135398 31158063 - MGP_BALBcJ_P0088614 Rbpms protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088615.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135400 31205325 - Rbpms protein_coding processed_transcript MGP_BALBcJ_T0088616.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135406 31148538 - Rbpms protein_coding retained_intron MGP_BALBcJ_T0088617.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31135515 31148207 - MGP_BALBcJ_P0088617 Rbpms protein_coding unknown_likely_coding MGP_BALBcJ_T0088618.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31155205 31284130 - MGP_BALBcJ_P0088618 Rbpms protein_coding protein_coding MGP_BALBcJ_T0088619.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31158005 31195213 - MGP_BALBcJ_P0088619 Rbpms protein_coding protein_coding MGP_BALBcJ_T0088620.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31158027 31243556 - MGP_BALBcJ_P0088620 Rbpms protein_coding protein_coding MGP_BALBcJ_T0088621.1 MGP_BALBcJ_G0033505.1 mouse_genomes_project 8 31216144 31245558 - Rbpms protein_coding processed_transcript MGP_BALBcJ_T0090341.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104402706 104444905 + MGP_BALBcJ_P0090341 Prmt7 protein_coding protein_coding MGP_BALBcJ_T0090342.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104402793 104427173 + MGP_BALBcJ_P0090342 Prmt7 protein_coding protein_coding MGP_BALBcJ_T0090343.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104402807 104434969 + Prmt7 protein_coding retained_intron MGP_BALBcJ_T0090344.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104402988 104418958 + MGP_BALBcJ_P0090344 Prmt7 protein_coding protein_coding MGP_BALBcJ_T0090345.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104404296 104429843 + MGP_BALBcJ_P0090345 Prmt7 protein_coding protein_coding MGP_BALBcJ_T0090346.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104426308 104429178 + Prmt7 protein_coding processed_transcript MGP_BALBcJ_T0090347.1 MGP_BALBcJ_G0034054.1 mouse_genomes_project 8 104429544 104436507 + Prmt7 protein_coding processed_transcript MGP_BALBcJ_T0015927.1 MGP_BALBcJ_G0014024.1 mouse_genomes_project 8 16770327 16770918 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090680.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118600138 118653129 + MGP_BALBcJ_P0090680 6430548M08Rik protein_coding protein_coding MGP_BALBcJ_T0090681.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118600138 118642113 + MGP_BALBcJ_P0090681 6430548M08Rik protein_coding protein_coding MGP_BALBcJ_T0090682.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118600139 118653127 + MGP_BALBcJ_P0090682 6430548M08Rik protein_coding protein_coding MGP_BALBcJ_T0090683.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118631319 118632375 + MGP_BALBcJ_P0090683 6430548M08Rik protein_coding protein_coding MGP_BALBcJ_T0090684.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118631560 118640084 + MGP_BALBcJ_P0090684 6430548M08Rik protein_coding protein_coding MGP_BALBcJ_T0090685.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118631785 118650711 + MGP_BALBcJ_P0090685 6430548M08Rik protein_coding protein_coding MGP_BALBcJ_T0090686.1 MGP_BALBcJ_G0034172.1 mouse_genomes_project 8 118643686 118649209 + 6430548M08Rik protein_coding processed_transcript MGP_BALBcJ_T0088105.1 MGP_BALBcJ_G0033317.1 mouse_genomes_project 8 1600167 1616467 + MGP_BALBcJ_P0088105 Zfp958 protein_coding protein_coding MGP_BALBcJ_T0088106.1 MGP_BALBcJ_G0033317.1 mouse_genomes_project 8 1612757 1616298 + MGP_BALBcJ_P0088106 Zfp958 protein_coding protein_coding MGP_BALBcJ_T0089899.1 MGP_BALBcJ_G0033892.1 mouse_genomes_project 8 85854504 85888592 + MGP_BALBcJ_P0089899 Heatr3 protein_coding protein_coding MGP_BALBcJ_T0089900.1 MGP_BALBcJ_G0033892.1 mouse_genomes_project 8 85854505 85888562 + MGP_BALBcJ_P0089900 Heatr3 protein_coding protein_coding MGP_BALBcJ_T0089901.1 MGP_BALBcJ_G0033892.1 mouse_genomes_project 8 85873694 85875379 + Heatr3 protein_coding retained_intron MGP_BALBcJ_T0089902.1 MGP_BALBcJ_G0033892.1 mouse_genomes_project 8 85878132 85888592 + Heatr3 protein_coding retained_intron MGP_BALBcJ_T0089903.1 MGP_BALBcJ_G0033892.1 mouse_genomes_project 8 85881088 85883437 + Heatr3 protein_coding retained_intron MGP_BALBcJ_T0010973.1 MGP_BALBcJ_G0009098.1 mouse_genomes_project 8 83385025 83385142 + Mir8109 miRNA miRNA MGP_BALBcJ_T0015938.1 MGP_BALBcJ_G0014035.1 mouse_genomes_project 8 32484520 32485053 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088843.1 MGP_BALBcJ_G0033573.1 mouse_genomes_project 8 44701714 44875238 - MGP_BALBcJ_P0088843 Stox2 protein_coding protein_coding MGP_BALBcJ_T0088844.1 MGP_BALBcJ_G0033573.1 mouse_genomes_project 8 44701714 44812044 - MGP_BALBcJ_P0088844 Stox2 protein_coding protein_coding MGP_BALBcJ_T0088330.1 MGP_BALBcJ_G0033393.1 mouse_genomes_project 8 16155504 16158294 + MGP_BALBcJ_P0088330 Defb34 protein_coding protein_coding MGP_BALBcJ_T0090540.1 MGP_BALBcJ_G0034119.1 mouse_genomes_project 8 110031746 110053176 - MGP_BALBcJ_P0090540 Bcar1 protein_coding unknown_likely_coding MGP_BALBcJ_T0090541.1 MGP_BALBcJ_G0034119.1 mouse_genomes_project 8 110031763 110064984 - MGP_BALBcJ_P0090541 Bcar1 protein_coding protein_coding MGP_BALBcJ_T0089424.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647639 69667015 + MGP_BALBcJ_P0089424 Zfp961 protein_coding protein_coding MGP_BALBcJ_T0089425.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647649 69667015 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089426.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647667 69666605 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089427.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647668 69664963 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089428.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647671 69664738 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089429.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647672 69665014 + MGP_BALBcJ_P0089429 Zfp961 protein_coding protein_coding MGP_BALBcJ_T0089430.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647678 69664854 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089431.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647681 69665203 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089432.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647682 69662929 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089433.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647682 69665664 + MGP_BALBcJ_P0089433 Zfp961 protein_coding protein_coding MGP_BALBcJ_T0089434.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647692 69690010 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0089435.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69647692 69668395 + MGP_BALBcJ_P0089435 Zfp961 protein_coding protein_coding MGP_BALBcJ_T0089436.1 MGP_BALBcJ_G0033746.1 mouse_genomes_project 8 69650085 69664861 + Zfp961 protein_coding processed_transcript MGP_BALBcJ_T0090544.1 MGP_BALBcJ_G0034122.1 mouse_genomes_project 8 110213957 110236613 - MGP_BALBcJ_P0090544 Chst5 protein_coding protein_coding MGP_BALBcJ_T0009129.1 MGP_BALBcJ_G0007338.1 mouse_genomes_project 8 89562213 89569606 + Irx3os lincRNA lincRNA MGP_BALBcJ_T0009130.1 MGP_BALBcJ_G0007338.1 mouse_genomes_project 8 89563973 89567276 + Irx3os lincRNA lincRNA MGP_BALBcJ_T0009069.1 MGP_BALBcJ_G0007291.1 mouse_genomes_project 8 31081362 31082641 - 1700104B16Rik lincRNA lincRNA MGP_BALBcJ_T0009070.1 MGP_BALBcJ_G0007291.1 mouse_genomes_project 8 31081362 31082636 - 1700104B16Rik lincRNA lincRNA MGP_BALBcJ_T0089088.1 MGP_BALBcJ_G0033648.1 mouse_genomes_project 8 66957489 66957876 - MGP_BALBcJ_P0089088 protein_coding protein_coding MGP_BALBcJ_T0100155.1 MGP_BALBcJ_G0038191.1 mouse_genomes_project 8 113994112 113994216 - Gm23677 snRNA snRNA MGP_BALBcJ_T0088221.1 MGP_BALBcJ_G0033356.1 mouse_genomes_project 8 10308223 10339224 - MGP_BALBcJ_P0088221 protein_coding protein_coding MGP_BALBcJ_T0088222.1 MGP_BALBcJ_G0033356.1 mouse_genomes_project 8 10322217 10339224 - MGP_BALBcJ_P0088222 protein_coding protein_coding MGP_BALBcJ_T0088223.1 MGP_BALBcJ_G0033356.1 mouse_genomes_project 8 10327512 10328336 - protein_coding retained_intron MGP_BALBcJ_T0088224.1 MGP_BALBcJ_G0033356.1 mouse_genomes_project 8 10327760 10339133 - MGP_BALBcJ_P0088224 protein_coding protein_coding MGP_BALBcJ_T0088225.1 MGP_BALBcJ_G0033356.1 mouse_genomes_project 8 10327892 10339158 - MGP_BALBcJ_P0088225 protein_coding protein_coding MGP_BALBcJ_T0090599.1 MGP_BALBcJ_G0034143.1 mouse_genomes_project 8 115418109 115432811 - MGP_BALBcJ_P0090599 Gcsh protein_coding protein_coding MGP_BALBcJ_T0090600.1 MGP_BALBcJ_G0034143.1 mouse_genomes_project 8 115420135 115430636 - Gcsh protein_coding processed_transcript MGP_BALBcJ_T0088367.1 MGP_BALBcJ_G0033421.1 mouse_genomes_project 8 19445506 19480769 - MGP_BALBcJ_P0088367 Nek3 protein_coding protein_coding MGP_BALBcJ_T0088368.1 MGP_BALBcJ_G0033421.1 mouse_genomes_project 8 19445506 19480792 - MGP_BALBcJ_P0088368 Nek3 protein_coding protein_coding MGP_BALBcJ_T0088369.1 MGP_BALBcJ_G0033421.1 mouse_genomes_project 8 19445509 19476743 - MGP_BALBcJ_P0088369 Nek3 protein_coding protein_coding MGP_BALBcJ_T0088370.1 MGP_BALBcJ_G0033421.1 mouse_genomes_project 8 19445909 19449527 - Nek3 protein_coding retained_intron MGP_BALBcJ_T0015977.1 MGP_BALBcJ_G0014074.1 mouse_genomes_project 8 93347875 93349313 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090046.1 MGP_BALBcJ_G0033939.1 mouse_genomes_project 8 92380029 92433239 + MGP_BALBcJ_P0090046 Rspry1 protein_coding protein_coding MGP_BALBcJ_T0090047.1 MGP_BALBcJ_G0033939.1 mouse_genomes_project 8 92380052 92398378 + MGP_BALBcJ_P0090047 Rspry1 protein_coding protein_coding MGP_BALBcJ_T0090048.1 MGP_BALBcJ_G0033939.1 mouse_genomes_project 8 92401497 92405056 + Rspry1 protein_coding retained_intron MGP_BALBcJ_T0088532.1 MGP_BALBcJ_G0033470.1 mouse_genomes_project 8 23353417 23371339 - MGP_BALBcJ_P0088532 Fnta protein_coding protein_coding MGP_BALBcJ_T0089007.1 MGP_BALBcJ_G0033623.1 mouse_genomes_project 8 62521658 62544760 + MGP_BALBcJ_P0089007 Tmem192 protein_coding protein_coding MGP_BALBcJ_T0089008.1 MGP_BALBcJ_G0033623.1 mouse_genomes_project 8 62521658 62544760 + MGP_BALBcJ_P0089008 Tmem192 protein_coding protein_coding MGP_BALBcJ_T0101395.1 MGP_BALBcJ_G0039431.1 mouse_genomes_project 8 54171558 54171690 - Gm24375 snoRNA snoRNA MGP_BALBcJ_T0088793.1 MGP_BALBcJ_G0033561.1 mouse_genomes_project 8 43519392 43522358 - MGP_BALBcJ_P0088793 Ankrd37 protein_coding protein_coding MGP_BALBcJ_T0088794.1 MGP_BALBcJ_G0033561.1 mouse_genomes_project 8 43519401 43522358 - Ankrd37 protein_coding processed_transcript MGP_BALBcJ_T0088795.1 MGP_BALBcJ_G0033561.1 mouse_genomes_project 8 43519404 43522057 - Ankrd37 protein_coding retained_intron MGP_BALBcJ_T0088796.1 MGP_BALBcJ_G0033561.1 mouse_genomes_project 8 43519455 43520359 - Ankrd37 protein_coding processed_transcript MGP_BALBcJ_T0088797.1 MGP_BALBcJ_G0033561.1 mouse_genomes_project 8 43520622 43522340 - Ankrd37 protein_coding retained_intron MGP_BALBcJ_T0090437.1 MGP_BALBcJ_G0034089.1 mouse_genomes_project 8 108213600 108228144 - MGP_BALBcJ_P0090437 Marveld3 protein_coding protein_coding MGP_BALBcJ_T0090438.1 MGP_BALBcJ_G0034089.1 mouse_genomes_project 8 108218589 108228179 - MGP_BALBcJ_P0090438 Marveld3 protein_coding protein_coding MGP_BALBcJ_T0090439.1 MGP_BALBcJ_G0034089.1 mouse_genomes_project 8 108225606 108228029 - Marveld3 protein_coding retained_intron MGP_BALBcJ_T0100159.1 MGP_BALBcJ_G0038195.1 mouse_genomes_project 8 121517380 121517487 - Gm24445 snRNA snRNA MGP_BALBcJ_T0090219.1 MGP_BALBcJ_G0034004.1 mouse_genomes_project 8 103403003 103405519 - MGP_BALBcJ_P0090219 B3gnt9 protein_coding protein_coding MGP_BALBcJ_T0090220.1 MGP_BALBcJ_G0034004.1 mouse_genomes_project 8 103403004 103405517 - MGP_BALBcJ_P0090220 B3gnt9 protein_coding protein_coding MGP_BALBcJ_T0090221.1 MGP_BALBcJ_G0034004.1 mouse_genomes_project 8 103404687 103405517 - MGP_BALBcJ_P0090221 B3gnt9 protein_coding protein_coding MGP_BALBcJ_T0088269.1 MGP_BALBcJ_G0033375.1 mouse_genomes_project 8 11162152 11164282 + MGP_BALBcJ_P0088269 protein_coding protein_coding MGP_BALBcJ_T0090197.1 MGP_BALBcJ_G0033996.1 mouse_genomes_project 8 103086793 103095310 + MGP_BALBcJ_P0090197 Ces2f protein_coding protein_coding MGP_BALBcJ_T0010954.1 MGP_BALBcJ_G0009079.1 mouse_genomes_project 8 70149677 70149751 - Mir7068 miRNA miRNA MGP_BALBcJ_T0089617.1 MGP_BALBcJ_G0033815.1 mouse_genomes_project 8 81354815 81362952 + MGP_BALBcJ_P0089617 Ddx39 protein_coding protein_coding MGP_BALBcJ_T0089618.1 MGP_BALBcJ_G0033815.1 mouse_genomes_project 8 81354906 81362878 + Ddx39 protein_coding retained_intron MGP_BALBcJ_T0089619.1 MGP_BALBcJ_G0033815.1 mouse_genomes_project 8 81354906 81362879 + MGP_BALBcJ_P0089619 Ddx39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089620.1 MGP_BALBcJ_G0033815.1 mouse_genomes_project 8 81354910 81366518 + MGP_BALBcJ_P0089620 Ddx39 protein_coding protein_coding MGP_BALBcJ_T0089621.1 MGP_BALBcJ_G0033815.1 mouse_genomes_project 8 81355186 81362952 + MGP_BALBcJ_P0089621 Ddx39 protein_coding protein_coding MGP_BALBcJ_T0089622.1 MGP_BALBcJ_G0033815.1 mouse_genomes_project 8 81359220 81360898 + Ddx39 protein_coding retained_intron MGP_BALBcJ_T0090206.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103320611 103368558 + MGP_BALBcJ_P0090206 Cbfb protein_coding protein_coding MGP_BALBcJ_T0090207.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103320681 103368550 + MGP_BALBcJ_P0090207 Cbfb protein_coding protein_coding MGP_BALBcJ_T0090208.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103320681 103368550 + MGP_BALBcJ_P0090208 Cbfb protein_coding protein_coding MGP_BALBcJ_T0090209.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103320882 103368550 + MGP_BALBcJ_P0090209 Cbfb protein_coding protein_coding MGP_BALBcJ_T0090210.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103321046 103329175 + Cbfb protein_coding retained_intron MGP_BALBcJ_T0090211.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103321429 103344978 + Cbfb protein_coding processed_transcript MGP_BALBcJ_T0090212.1 MGP_BALBcJ_G0034002.1 mouse_genomes_project 8 103321501 103344958 + Cbfb protein_coding processed_transcript MGP_BALBcJ_T0018413.1 MGP_BALBcJ_G0015648.1 mouse_genomes_project 8 22895971 22903350 - Gm16159 processed_transcript processed_transcript MGP_BALBcJ_T0018414.1 MGP_BALBcJ_G0015648.1 mouse_genomes_project 8 22899944 22900827 - Gm16159 processed_transcript processed_transcript MGP_BALBcJ_T0088352.1 MGP_BALBcJ_G0033412.1 mouse_genomes_project 8 19215147 19216127 - MGP_BALBcJ_P0088352 Defb11 protein_coding protein_coding MGP_BALBcJ_T0090810.1 MGP_BALBcJ_G0034200.1 mouse_genomes_project 8 120980298 120986802 - MGP_BALBcJ_P0090810 Snai3 protein_coding protein_coding MGP_BALBcJ_T0089884.1 MGP_BALBcJ_G0033888.1 mouse_genomes_project 8 85176397 85181805 - MGP_BALBcJ_P0089884 Cbln1 protein_coding protein_coding MGP_BALBcJ_T0089885.1 MGP_BALBcJ_G0033888.1 mouse_genomes_project 8 85176781 85179816 - MGP_BALBcJ_P0089885 Cbln1 protein_coding protein_coding MGP_BALBcJ_T0087978.1 MGP_BALBcJ_G0033285.1 mouse_genomes_project 8 393242 403827 - MGP_BALBcJ_P0087978 Pex11g protein_coding protein_coding MGP_BALBcJ_T0087979.1 MGP_BALBcJ_G0033285.1 mouse_genomes_project 8 393245 403792 - MGP_BALBcJ_P0087979 Pex11g protein_coding protein_coding MGP_BALBcJ_T0087980.1 MGP_BALBcJ_G0033285.1 mouse_genomes_project 8 399368 403817 - MGP_BALBcJ_P0087980 Pex11g protein_coding protein_coding MGP_BALBcJ_T0088340.1 MGP_BALBcJ_G0033402.1 mouse_genomes_project 8 16579288 16581939 + MGP_BALBcJ_P0088340 Defb7 protein_coding protein_coding MGP_BALBcJ_T0088402.1 MGP_BALBcJ_G0033435.1 mouse_genomes_project 8 20103228 20121597 - MGP_BALBcJ_P0088402 Ap3m2 protein_coding unknown_likely_coding MGP_BALBcJ_T0005327.1 MGP_BALBcJ_G0004515.1 mouse_genomes_project 8 31165010 31184787 + Gm26632 antisense antisense MGP_BALBcJ_T0090182.1 MGP_BALBcJ_G0033988.1 mouse_genomes_project 8 102726812 102732175 + MGP_BALBcJ_P0090182 Pdp2 protein_coding protein_coding MGP_BALBcJ_T0088245.1 MGP_BALBcJ_G0033365.1 mouse_genomes_project 8 10661263 10678341 - Rasa3 protein_coding retained_intron MGP_BALBcJ_T0088246.1 MGP_BALBcJ_G0033365.1 mouse_genomes_project 8 10663004 10771017 - MGP_BALBcJ_P0088246 Rasa3 protein_coding protein_coding MGP_BALBcJ_T0088247.1 MGP_BALBcJ_G0033365.1 mouse_genomes_project 8 10671773 10672347 - Rasa3 protein_coding retained_intron MGP_BALBcJ_T0088248.1 MGP_BALBcJ_G0033365.1 mouse_genomes_project 8 10690111 10700405 - Rasa3 protein_coding retained_intron MGP_BALBcJ_T0088249.1 MGP_BALBcJ_G0033365.1 mouse_genomes_project 8 10690112 10771021 - MGP_BALBcJ_P0088249 Rasa3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089675.1 MGP_BALBcJ_G0033836.1 mouse_genomes_project 8 81897958 81901595 - MGP_BALBcJ_P0089675 D8Ertd738e protein_coding protein_coding MGP_BALBcJ_T0099059.1 MGP_BALBcJ_G0037096.1 mouse_genomes_project 8 9465070 9516532 + Gm5607 sense_overlapping sense_overlapping MGP_BALBcJ_T0099060.1 MGP_BALBcJ_G0037096.1 mouse_genomes_project 8 9465070 9516553 + Gm5607 sense_overlapping sense_overlapping MGP_BALBcJ_T0090444.1 MGP_BALBcJ_G0034093.1 mouse_genomes_project 8 108349712 108370466 - MGP_BALBcJ_P0090444 Gm17720 protein_coding protein_coding MGP_BALBcJ_T0089836.1 MGP_BALBcJ_G0033871.1 mouse_genomes_project 8 82767035 82781749 + MGP_BALBcJ_P0089836 Man2b1 protein_coding protein_coding MGP_BALBcJ_T0005317.1 MGP_BALBcJ_G0004509.1 mouse_genomes_project 8 13458271 13460997 + Gm16347 antisense antisense MGP_BALBcJ_T0005318.1 MGP_BALBcJ_G0004509.1 mouse_genomes_project 8 13458282 13462134 + Gm16347 antisense antisense MGP_BALBcJ_T0005359.1 MGP_BALBcJ_G0004543.1 mouse_genomes_project 8 103737237 103739612 + Gm38250 antisense antisense MGP_BALBcJ_T0005360.1 MGP_BALBcJ_G0004543.1 mouse_genomes_project 8 103737264 103754699 + Gm38250 antisense antisense MGP_BALBcJ_T0089601.1 MGP_BALBcJ_G0033810.1 mouse_genomes_project 8 81203325 81227005 - MGP_BALBcJ_P0089601 Tecr protein_coding protein_coding MGP_BALBcJ_T0089602.1 MGP_BALBcJ_G0033810.1 mouse_genomes_project 8 81203325 81226943 - MGP_BALBcJ_P0089602 Tecr protein_coding protein_coding MGP_BALBcJ_T0089603.1 MGP_BALBcJ_G0033810.1 mouse_genomes_project 8 81203325 81227005 - MGP_BALBcJ_P0089603 Tecr protein_coding protein_coding MGP_BALBcJ_T0090510.1 MGP_BALBcJ_G0034112.1 mouse_genomes_project 8 109618805 109648826 - MGP_BALBcJ_P0090510 Mlkl protein_coding protein_coding MGP_BALBcJ_T0090511.1 MGP_BALBcJ_G0034112.1 mouse_genomes_project 8 109618808 109648826 - MGP_BALBcJ_P0090511 Mlkl protein_coding protein_coding MGP_BALBcJ_T0090512.1 MGP_BALBcJ_G0034112.1 mouse_genomes_project 8 109618810 109623615 - Mlkl protein_coding processed_transcript MGP_BALBcJ_T0090513.1 MGP_BALBcJ_G0034112.1 mouse_genomes_project 8 109642207 109648442 - MGP_BALBcJ_P0090513 Mlkl protein_coding protein_coding MGP_BALBcJ_T0088331.1 MGP_BALBcJ_G0033394.1 mouse_genomes_project 8 16171856 16174109 + MGP_BALBcJ_P0088331 Spag11b protein_coding protein_coding MGP_BALBcJ_T0088332.1 MGP_BALBcJ_G0033394.1 mouse_genomes_project 8 16171895 16173848 + MGP_BALBcJ_P0088332 Spag11b protein_coding protein_coding MGP_BALBcJ_T0089181.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67849791 67880788 + MGP_BALBcJ_P0089181 Sugp2 protein_coding protein_coding MGP_BALBcJ_T0089182.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67849857 67857905 + MGP_BALBcJ_P0089182 Sugp2 protein_coding protein_coding MGP_BALBcJ_T0089183.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67849863 67869833 + Sugp2 protein_coding retained_intron MGP_BALBcJ_T0089184.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67851620 67858157 + MGP_BALBcJ_P0089184 Sugp2 protein_coding protein_coding MGP_BALBcJ_T0089185.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67858837 67873340 + Sugp2 protein_coding retained_intron MGP_BALBcJ_T0089186.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67863216 67866934 + Sugp2 protein_coding retained_intron MGP_BALBcJ_T0089187.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67867129 67895195 + Sugp2 protein_coding processed_transcript MGP_BALBcJ_T0089188.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67872545 67874472 + Sugp2 protein_coding retained_intron MGP_BALBcJ_T0089189.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67874817 67878171 + Sugp2 protein_coding processed_transcript MGP_BALBcJ_T0089190.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67875507 67878171 + Sugp2 protein_coding retained_intron MGP_BALBcJ_T0089191.1 MGP_BALBcJ_G0033676.1 mouse_genomes_project 8 67888515 67895194 + Sugp2 protein_coding processed_transcript MGP_BALBcJ_T0005314.1 MGP_BALBcJ_G0004506.1 mouse_genomes_project 8 12030644 12031165 - Gm16350 antisense antisense MGP_BALBcJ_T0089735.1 MGP_BALBcJ_G0033846.1 mouse_genomes_project 8 82483729 82492464 - MGP_BALBcJ_P0089735 Dand5 protein_coding protein_coding MGP_BALBcJ_T0011709.1 MGP_BALBcJ_G0009834.1 mouse_genomes_project 8 108776806 108777097 + Gm22701 misc_RNA misc_RNA MGP_BALBcJ_T0010929.1 MGP_BALBcJ_G0009054.1 mouse_genomes_project 8 10221595 10221656 + Mir7065 miRNA miRNA MGP_BALBcJ_T0089033.1 MGP_BALBcJ_G0033633.1 mouse_genomes_project 8 64389836 64419177 + MGP_BALBcJ_P0089033 Naf1 protein_coding protein_coding MGP_BALBcJ_T0099024.1 MGP_BALBcJ_G0037066.1 mouse_genomes_project 8 120440781 120441440 - sense_intronic sense_intronic MGP_BALBcJ_T0098396.1 MGP_BALBcJ_G0036450.1 mouse_genomes_project 8 22944596 22945585 + pseudogene pseudogene MGP_BALBcJ_T0089670.1 MGP_BALBcJ_G0033833.1 mouse_genomes_project 8 81797777 81811423 + MGP_BALBcJ_P0089670 4930432K21Rik protein_coding protein_coding MGP_BALBcJ_T0089671.1 MGP_BALBcJ_G0033833.1 mouse_genomes_project 8 81797905 81821818 + MGP_BALBcJ_P0089671 4930432K21Rik protein_coding protein_coding MGP_BALBcJ_T0089672.1 MGP_BALBcJ_G0033833.1 mouse_genomes_project 8 81797998 81821817 + MGP_BALBcJ_P0089672 4930432K21Rik protein_coding protein_coding MGP_BALBcJ_T0090026.1 MGP_BALBcJ_G0033933.1 mouse_genomes_project 8 91991399 92092956 + MGP_BALBcJ_P0090026 Nup93 protein_coding protein_coding MGP_BALBcJ_T0090027.1 MGP_BALBcJ_G0033933.1 mouse_genomes_project 8 92004315 92093165 + MGP_BALBcJ_P0090027 Nup93 protein_coding protein_coding MGP_BALBcJ_T0090509.1 MGP_BALBcJ_G0034111.1 mouse_genomes_project 8 109577995 109607292 - MGP_BALBcJ_P0090509 Rfwd3 protein_coding unknown_likely_coding MGP_BALBcJ_T0098655.1 MGP_BALBcJ_G0036709.1 mouse_genomes_project 8 6593222 6593340 - n-R5s95 rRNA rRNA MGP_BALBcJ_T0005370.1 MGP_BALBcJ_G0004552.1 mouse_genomes_project 8 112974634 112978232 - Gm16116 antisense antisense MGP_BALBcJ_T0005367.1 MGP_BALBcJ_G0004549.1 mouse_genomes_project 8 109088435 109090275 + Gm15895 antisense antisense MGP_BALBcJ_T0090250.1 MGP_BALBcJ_G0034017.1 mouse_genomes_project 8 103529963 103532250 + MGP_BALBcJ_P0090250 Plekhg4 protein_coding protein_coding MGP_BALBcJ_T0090251.1 MGP_BALBcJ_G0034017.1 mouse_genomes_project 8 103531593 103539549 + MGP_BALBcJ_P0090251 Plekhg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090252.1 MGP_BALBcJ_G0034017.1 mouse_genomes_project 8 103532070 103538931 + MGP_BALBcJ_P0090252 Plekhg4 protein_coding protein_coding MGP_BALBcJ_T0090253.1 MGP_BALBcJ_G0034017.1 mouse_genomes_project 8 103532070 103539552 + MGP_BALBcJ_P0090253 Plekhg4 protein_coding protein_coding MGP_BALBcJ_T0090254.1 MGP_BALBcJ_G0034017.1 mouse_genomes_project 8 103537183 103539545 + Plekhg4 protein_coding retained_intron MGP_BALBcJ_T0088064.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1226534 1235673 + MGP_BALBcJ_P0088064 protein_coding protein_coding MGP_BALBcJ_T0088065.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1226602 1235673 + MGP_BALBcJ_P0088065 protein_coding protein_coding MGP_BALBcJ_T0088066.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1226602 1235673 + MGP_BALBcJ_P0088066 protein_coding protein_coding MGP_BALBcJ_T0088067.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1226638 1239190 + MGP_BALBcJ_P0088067 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088068.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1226683 1233608 + MGP_BALBcJ_P0088068 protein_coding protein_coding MGP_BALBcJ_T0088069.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1227877 1235673 + MGP_BALBcJ_P0088069 protein_coding protein_coding MGP_BALBcJ_T0088070.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1231042 1233620 + MGP_BALBcJ_P0088070 protein_coding protein_coding MGP_BALBcJ_T0088071.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1232235 1233955 + protein_coding processed_transcript MGP_BALBcJ_T0088072.1 MGP_BALBcJ_G0033309.1 mouse_genomes_project 8 1232415 1234078 + protein_coding retained_intron MGP_BALBcJ_T0090651.1 MGP_BALBcJ_G0034163.1 mouse_genomes_project 8 118102375 118113868 - MGP_BALBcJ_P0090651 Kcng4 protein_coding protein_coding MGP_BALBcJ_T0090652.1 MGP_BALBcJ_G0034163.1 mouse_genomes_project 8 118102375 118114202 - MGP_BALBcJ_P0090652 Kcng4 protein_coding protein_coding MGP_BALBcJ_T0090329.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104319805 104326461 - MGP_BALBcJ_P0090329 Esrp2 protein_coding protein_coding MGP_BALBcJ_T0090330.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104321711 104326300 - MGP_BALBcJ_P0090330 Esrp2 protein_coding protein_coding MGP_BALBcJ_T0090331.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104322214 104322562 - Esrp2 protein_coding processed_transcript MGP_BALBcJ_T0090332.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104322301 104324211 - Esrp2 protein_coding retained_intron MGP_BALBcJ_T0090333.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104322754 104323615 - Esrp2 protein_coding retained_intron MGP_BALBcJ_T0090334.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104323014 104323615 - Esrp2 protein_coding retained_intron MGP_BALBcJ_T0090335.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104323288 104324583 - Esrp2 protein_coding retained_intron MGP_BALBcJ_T0090336.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104323445 104324428 - Esrp2 protein_coding retained_intron MGP_BALBcJ_T0090337.1 MGP_BALBcJ_G0034050.1 mouse_genomes_project 8 104325669 104326172 - Esrp2 protein_coding retained_intron MGP_BALBcJ_T0002321.1 MGP_BALBcJ_G0002232.1 mouse_genomes_project 8 10349163 10350249 - TEC TEC MGP_BALBcJ_T0090356.1 MGP_BALBcJ_G0034061.1 mouse_genomes_project 8 105080711 105093863 + MGP_BALBcJ_P0090356 Has3 protein_coding protein_coding MGP_BALBcJ_T0090357.1 MGP_BALBcJ_G0034061.1 mouse_genomes_project 8 105081305 105092235 + MGP_BALBcJ_P0090357 Has3 protein_coding protein_coding MGP_BALBcJ_T0011007.1 MGP_BALBcJ_G0009132.1 mouse_genomes_project 8 121675771 121675838 + Mir7080 miRNA miRNA MGP_BALBcJ_T0018420.1 MGP_BALBcJ_G0015652.1 mouse_genomes_project 8 43230244 43245605 + processed_transcript processed_transcript MGP_BALBcJ_T0090654.1 MGP_BALBcJ_G0034165.1 mouse_genomes_project 8 118180581 118239075 + MGP_BALBcJ_P0090654 Atp2c2 protein_coding protein_coding MGP_BALBcJ_T0009148.1 MGP_BALBcJ_G0007348.1 mouse_genomes_project 8 97238647 97246673 + lincRNA lincRNA MGP_BALBcJ_T0088536.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23475730 23500449 + MGP_BALBcJ_P0088536 protein_coding protein_coding MGP_BALBcJ_T0088537.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23475740 23497866 + MGP_BALBcJ_P0088537 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088538.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23475743 23497665 + MGP_BALBcJ_P0088538 protein_coding protein_coding MGP_BALBcJ_T0088539.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23475748 23485516 + MGP_BALBcJ_P0088539 protein_coding protein_coding MGP_BALBcJ_T0088540.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23475836 23485907 + MGP_BALBcJ_P0088540 protein_coding protein_coding MGP_BALBcJ_T0088541.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23475926 23499214 + MGP_BALBcJ_P0088541 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088542.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23476024 23485516 + MGP_BALBcJ_P0088542 protein_coding protein_coding MGP_BALBcJ_T0088543.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23476840 23482591 + MGP_BALBcJ_P0088543 protein_coding protein_coding MGP_BALBcJ_T0088544.1 MGP_BALBcJ_G0033472.1 mouse_genomes_project 8 23480229 23497619 + MGP_BALBcJ_P0088544 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015934.1 MGP_BALBcJ_G0014031.1 mouse_genomes_project 8 25567072 25573075 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005387.1 MGP_BALBcJ_G0004568.1 mouse_genomes_project 8 125156455 125180318 + Gm26759 antisense antisense MGP_BALBcJ_T0090834.1 MGP_BALBcJ_G0034205.1 mouse_genomes_project 8 121103319 121105591 - MGP_BALBcJ_P0090834 Aprt protein_coding protein_coding MGP_BALBcJ_T0088063.1 MGP_BALBcJ_G0033308.1 mouse_genomes_project 8 1214990 1225242 + MGP_BALBcJ_P0088063 Lrrc8e protein_coding protein_coding MGP_BALBcJ_T0088553.1 MGP_BALBcJ_G0033477.1 mouse_genomes_project 8 24460794 24501357 + MGP_BALBcJ_P0088553 Adgra2 protein_coding protein_coding MGP_BALBcJ_T0088554.1 MGP_BALBcJ_G0033477.1 mouse_genomes_project 8 24460809 24501358 + MGP_BALBcJ_P0088554 Adgra2 protein_coding protein_coding MGP_BALBcJ_T0088555.1 MGP_BALBcJ_G0033477.1 mouse_genomes_project 8 24492062 24496764 + MGP_BALBcJ_P0088555 Adgra2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088556.1 MGP_BALBcJ_G0033477.1 mouse_genomes_project 8 24495298 24499545 + MGP_BALBcJ_P0088556 Adgra2 protein_coding protein_coding MGP_BALBcJ_T0089557.1 MGP_BALBcJ_G0033793.1 mouse_genomes_project 8 78091770 78109879 + MGP_BALBcJ_P0089557 Gypa protein_coding protein_coding MGP_BALBcJ_T0090350.1 MGP_BALBcJ_G0034057.1 mouse_genomes_project 8 104696037 104702678 + MGP_BALBcJ_P0090350 6030452D12Rik protein_coding protein_coding MGP_BALBcJ_T0090551.1 MGP_BALBcJ_G0034126.1 mouse_genomes_project 8 110323209 110340803 - MGP_BALBcJ_P0090551 Kars protein_coding protein_coding MGP_BALBcJ_T0090552.1 MGP_BALBcJ_G0034126.1 mouse_genomes_project 8 110323213 110340839 - MGP_BALBcJ_P0090552 Kars protein_coding protein_coding MGP_BALBcJ_T0090553.1 MGP_BALBcJ_G0034126.1 mouse_genomes_project 8 110323213 110340781 - MGP_BALBcJ_P0090553 Kars protein_coding protein_coding MGP_BALBcJ_T0009162.1 MGP_BALBcJ_G0007359.1 mouse_genomes_project 8 119087542 119091035 + Gm10614 lincRNA lincRNA MGP_BALBcJ_T0002320.1 MGP_BALBcJ_G0002231.1 mouse_genomes_project 8 1512932 1513146 - TEC TEC MGP_BALBcJ_T0011711.1 MGP_BALBcJ_G0009836.1 mouse_genomes_project 8 119222551 119222806 - Gm24239 misc_RNA misc_RNA MGP_BALBcJ_T0088436.1 MGP_BALBcJ_G0033446.1 mouse_genomes_project 8 21870341 21893194 - Ido2 protein_coding processed_transcript MGP_BALBcJ_T0088437.1 MGP_BALBcJ_G0033446.1 mouse_genomes_project 8 21870901 21919924 - MGP_BALBcJ_P0088437 Ido2 protein_coding protein_coding MGP_BALBcJ_T0088438.1 MGP_BALBcJ_G0033446.1 mouse_genomes_project 8 21871901 21879248 - Ido2 protein_coding retained_intron MGP_BALBcJ_T0088439.1 MGP_BALBcJ_G0033446.1 mouse_genomes_project 8 21889354 21893151 - Ido2 protein_coding processed_transcript MGP_BALBcJ_T0009091.1 MGP_BALBcJ_G0007310.1 mouse_genomes_project 8 68417407 68418416 + 2010320M18Rik lincRNA lincRNA MGP_BALBcJ_T0089441.1 MGP_BALBcJ_G0033749.1 mouse_genomes_project 8 69812418 69822143 + Tpm4 protein_coding processed_transcript MGP_BALBcJ_T0089442.1 MGP_BALBcJ_G0033749.1 mouse_genomes_project 8 69812702 69830292 + MGP_BALBcJ_P0089442 Tpm4 protein_coding protein_coding MGP_BALBcJ_T0088006.1 MGP_BALBcJ_G0033293.1 mouse_genomes_project 8 563145 566036 + MGP_BALBcJ_P0088006 Pet100 protein_coding protein_coding MGP_BALBcJ_T0089144.1 MGP_BALBcJ_G0033669.1 mouse_genomes_project 8 67747167 67755641 - MGP_BALBcJ_P0089144 Rfxank protein_coding protein_coding MGP_BALBcJ_T0089146.1 MGP_BALBcJ_G0033669.1 mouse_genomes_project 8 67749753 67755669 - MGP_BALBcJ_P0089146 Rfxank protein_coding unknown_likely_coding MGP_BALBcJ_T0088530.1 MGP_BALBcJ_G0033468.1 mouse_genomes_project 8 23294763 23327618 - MGP_BALBcJ_P0088530 Hgsnat protein_coding protein_coding MGP_BALBcJ_T0015926.1 MGP_BALBcJ_G0014023.1 mouse_genomes_project 8 16723743 16726424 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009100.1 MGP_BALBcJ_G0007318.1 mouse_genomes_project 8 79294244 79295441 - 4930579O11Rik lincRNA lincRNA MGP_BALBcJ_T0009101.1 MGP_BALBcJ_G0007318.1 mouse_genomes_project 8 79294272 79295487 - 4930579O11Rik lincRNA lincRNA MGP_BALBcJ_T0089555.1 MGP_BALBcJ_G0033792.1 mouse_genomes_project 8 77570125 77594267 - Hhip protein_coding processed_transcript MGP_BALBcJ_T0089556.1 MGP_BALBcJ_G0033792.1 mouse_genomes_project 8 77574276 77662793 - MGP_BALBcJ_P0089556 Hhip protein_coding protein_coding MGP_BALBcJ_T0089748.1 MGP_BALBcJ_G0033850.1 mouse_genomes_project 8 82524483 82527348 - MGP_BALBcJ_P0089748 protein_coding protein_coding MGP_BALBcJ_T0088232.1 MGP_BALBcJ_G0033358.1 mouse_genomes_project 8 10374908 10411449 + MGP_BALBcJ_P0088232 Tmco3 protein_coding protein_coding MGP_BALBcJ_T0088233.1 MGP_BALBcJ_G0033358.1 mouse_genomes_project 8 10375066 10409927 + MGP_BALBcJ_P0088233 Tmco3 protein_coding unknown_likely_coding MGP_BALBcJ_T0090881.1 MGP_BALBcJ_G0034219.1 mouse_genomes_project 8 121759561 121767977 - MGP_BALBcJ_P0090881 Chmp1a protein_coding protein_coding MGP_BALBcJ_T0090882.1 MGP_BALBcJ_G0034219.1 mouse_genomes_project 8 121761414 121764977 - Chmp1a protein_coding retained_intron MGP_BALBcJ_T0090883.1 MGP_BALBcJ_G0034219.1 mouse_genomes_project 8 121764794 121767980 - Chmp1a protein_coding retained_intron MGP_BALBcJ_T0089736.1 MGP_BALBcJ_G0033847.1 mouse_genomes_project 8 82502041 82506007 + MGP_BALBcJ_P0089736 Gadd45gip1 protein_coding protein_coding MGP_BALBcJ_T0089737.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82504531 82508572 - MGP_BALBcJ_P0089737 Rad23a protein_coding protein_coding MGP_BALBcJ_T0089738.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82505164 82511167 - MGP_BALBcJ_P0089738 Rad23a protein_coding protein_coding MGP_BALBcJ_T0089739.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82505422 82511191 - MGP_BALBcJ_P0089739 Rad23a protein_coding protein_coding MGP_BALBcJ_T0089740.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82506144 82511191 - MGP_BALBcJ_P0089740 Rad23a protein_coding protein_coding MGP_BALBcJ_T0089741.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82508246 82509191 - Rad23a protein_coding retained_intron MGP_BALBcJ_T0089742.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82508259 82509205 - Rad23a protein_coding retained_intron MGP_BALBcJ_T0089743.1 MGP_BALBcJ_G0033848.1 mouse_genomes_project 8 82508823 82511162 - Rad23a protein_coding retained_intron MGP_BALBcJ_T0101409.1 MGP_BALBcJ_G0039445.1 mouse_genomes_project 8 74713974 74714104 - Gm24838 snoRNA snoRNA MGP_BALBcJ_T0090396.1 MGP_BALBcJ_G0034073.1 mouse_genomes_project 8 105629634 105644642 - MGP_BALBcJ_P0090396 Nqo1 protein_coding protein_coding MGP_BALBcJ_T0090414.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107856434 107871324 - MGP_BALBcJ_P0090414 Dhodh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090415.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107858338 107859143 - Dhodh protein_coding processed_transcript MGP_BALBcJ_T0090416.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107858564 107873464 - MGP_BALBcJ_P0090416 Dhodh protein_coding protein_coding MGP_BALBcJ_T0090417.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107858568 107873715 - MGP_BALBcJ_P0090417 Dhodh protein_coding protein_coding MGP_BALBcJ_T0090418.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107858992 107861374 - Dhodh protein_coding retained_intron MGP_BALBcJ_T0090419.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107859064 107860042 - Dhodh protein_coding retained_intron MGP_BALBcJ_T0090420.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107859137 107866576 - Dhodh protein_coding retained_intron MGP_BALBcJ_T0090421.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107861121 107873458 - MGP_BALBcJ_P0090421 Dhodh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090422.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107866384 107873512 - Dhodh protein_coding retained_intron MGP_BALBcJ_T0090423.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107866395 107873512 - Dhodh protein_coding retained_intron MGP_BALBcJ_T0090424.1 MGP_BALBcJ_G0034082.1 mouse_genomes_project 8 107868367 107873765 - MGP_BALBcJ_P0090424 Dhodh protein_coding protein_coding MGP_BALBcJ_T0005366.1 MGP_BALBcJ_G0004548.1 mouse_genomes_project 8 109034648 109039688 + Gm15894 antisense antisense MGP_BALBcJ_T0090489.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109322584 109326297 + MGP_BALBcJ_P0090489 Aars protein_coding protein_coding MGP_BALBcJ_T0090490.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109323319 109337770 + Aars protein_coding retained_intron MGP_BALBcJ_T0090491.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109323342 109350330 + MGP_BALBcJ_P0090491 Aars protein_coding protein_coding MGP_BALBcJ_T0090492.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109323356 109339390 + Aars protein_coding retained_intron MGP_BALBcJ_T0090493.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109331102 109332197 + Aars protein_coding retained_intron MGP_BALBcJ_T0090494.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109332466 109337768 + Aars protein_coding retained_intron MGP_BALBcJ_T0090495.1 MGP_BALBcJ_G0034107.1 mouse_genomes_project 8 109340552 109342642 + Aars protein_coding retained_intron MGP_BALBcJ_T0088785.1 MGP_BALBcJ_G0033559.1 mouse_genomes_project 8 43473926 43495785 - MGP_BALBcJ_P0088785 1700029J07Rik protein_coding protein_coding MGP_BALBcJ_T0088786.1 MGP_BALBcJ_G0033559.1 mouse_genomes_project 8 43473928 43495785 - MGP_BALBcJ_P0088786 1700029J07Rik protein_coding protein_coding MGP_BALBcJ_T0098660.1 MGP_BALBcJ_G0036714.1 mouse_genomes_project 8 45435038 45435151 + n-R5s97 rRNA rRNA MGP_BALBcJ_T0090413.1 MGP_BALBcJ_G0034081.1 mouse_genomes_project 8 107840439 107844482 - MGP_BALBcJ_P0090413 Hp protein_coding protein_coding MGP_BALBcJ_T0090588.1 MGP_BALBcJ_G0034138.1 mouse_genomes_project 8 114992377 115166529 - MGP_BALBcJ_P0090588 Cdyl2 protein_coding protein_coding MGP_BALBcJ_T0098403.1 MGP_BALBcJ_G0036457.1 mouse_genomes_project 8 115197676 115199012 - pseudogene pseudogene MGP_BALBcJ_T0010937.1 MGP_BALBcJ_G0009062.1 mouse_genomes_project 8 20464522 20464612 - Mir3107 miRNA miRNA MGP_BALBcJ_T0090757.1 MGP_BALBcJ_G0034189.1 mouse_genomes_project 8 120258265 120318641 + Jph3 protein_coding processed_transcript MGP_BALBcJ_T0090758.1 MGP_BALBcJ_G0034189.1 mouse_genomes_project 8 120259131 120319845 + MGP_BALBcJ_P0090758 Jph3 protein_coding protein_coding MGP_BALBcJ_T0090759.1 MGP_BALBcJ_G0034189.1 mouse_genomes_project 8 120259135 120323293 + MGP_BALBcJ_P0090759 Jph3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090760.1 MGP_BALBcJ_G0034189.1 mouse_genomes_project 8 120282491 120311607 + Jph3 protein_coding retained_intron MGP_BALBcJ_T0090996.1 MGP_BALBcJ_G0034254.1 mouse_genomes_project 8 123449998 123457442 - MGP_BALBcJ_P0090996 Exoc8 protein_coding protein_coding MGP_BALBcJ_T0009117.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182024 85232575 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0009118.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182024 85232576 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0009119.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182024 85230409 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0009120.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182056 85232574 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0009121.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182328 85232030 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0009122.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182346 85232576 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0009123.1 MGP_BALBcJ_G0007333.1 mouse_genomes_project 8 85182369 85210872 + Gm2694 lincRNA lincRNA MGP_BALBcJ_T0015949.1 MGP_BALBcJ_G0014046.1 mouse_genomes_project 8 56300240 56301182 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089128.1 MGP_BALBcJ_G0033661.1 mouse_genomes_project 8 67501545 67510082 - MGP_BALBcJ_P0089128 Ndufa13 protein_coding protein_coding MGP_BALBcJ_T0089349.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111564 69114620 + Dda1 protein_coding processed_transcript MGP_BALBcJ_T0089350.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111564 69118477 + Dda1 protein_coding processed_transcript MGP_BALBcJ_T0089351.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111564 69114749 + Dda1 protein_coding retained_intron MGP_BALBcJ_T0089352.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111564 69118477 + Dda1 protein_coding processed_transcript MGP_BALBcJ_T0089353.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111564 69118477 + MGP_BALBcJ_P0089353 Dda1 protein_coding protein_coding MGP_BALBcJ_T0089354.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111564 69118477 + MGP_BALBcJ_P0089354 Dda1 protein_coding protein_coding MGP_BALBcJ_T0089355.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111570 69118477 + MGP_BALBcJ_P0089355 Dda1 protein_coding protein_coding MGP_BALBcJ_T0089356.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111576 69115156 + Dda1 protein_coding retained_intron MGP_BALBcJ_T0089357.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111576 69117353 + Dda1 protein_coding retained_intron MGP_BALBcJ_T0089358.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69111650 69114989 + Dda1 protein_coding retained_intron MGP_BALBcJ_T0089359.1 MGP_BALBcJ_G0033726.1 mouse_genomes_project 8 69112775 69118477 + Dda1 protein_coding processed_transcript MGP_BALBcJ_T0010939.1 MGP_BALBcJ_G0009064.1 mouse_genomes_project 8 23578604 23578685 + Gm44299 miRNA miRNA MGP_BALBcJ_T0090741.1 MGP_BALBcJ_G0034184.1 mouse_genomes_project 8 119642685 119645400 + MGP_BALBcJ_P0090741 Foxl1 protein_coding protein_coding MGP_BALBcJ_T0088517.1 MGP_BALBcJ_G0033463.1 mouse_genomes_project 8 23115641 23136316 - MGP_BALBcJ_P0088517 Bag4 protein_coding protein_coding MGP_BALBcJ_T0089219.1 MGP_BALBcJ_G0033682.1 mouse_genomes_project 8 67988947 67997576 + MGP_BALBcJ_P0089219 Comp protein_coding protein_coding MGP_BALBcJ_T0089780.1 MGP_BALBcJ_G0033857.1 mouse_genomes_project 8 82621423 82635389 + MGP_BALBcJ_P0089780 Rtbdn protein_coding protein_coding MGP_BALBcJ_T0089781.1 MGP_BALBcJ_G0033857.1 mouse_genomes_project 8 82621423 82635389 + MGP_BALBcJ_P0089781 Rtbdn protein_coding protein_coding MGP_BALBcJ_T0089782.1 MGP_BALBcJ_G0033857.1 mouse_genomes_project 8 82624444 82635389 + MGP_BALBcJ_P0089782 Rtbdn protein_coding protein_coding MGP_BALBcJ_T0089783.1 MGP_BALBcJ_G0033857.1 mouse_genomes_project 8 82625758 82635297 + MGP_BALBcJ_P0089783 Rtbdn protein_coding protein_coding MGP_BALBcJ_T0088285.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 11980831 12070824 + MGP_BALBcJ_P0088285 Arhgef10 protein_coding protein_coding MGP_BALBcJ_T0088286.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 11980885 11997764 + Arhgef10 protein_coding retained_intron MGP_BALBcJ_T0088287.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 11980892 12030781 + MGP_BALBcJ_P0088287 Arhgef10 protein_coding protein_coding MGP_BALBcJ_T0088288.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 11980906 12070824 + MGP_BALBcJ_P0088288 Arhgef10 protein_coding protein_coding MGP_BALBcJ_T0088289.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 12015024 12070821 + MGP_BALBcJ_P0088289 Arhgef10 protein_coding protein_coding MGP_BALBcJ_T0088290.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 12060019 12060780 + Arhgef10 protein_coding processed_transcript MGP_BALBcJ_T0088291.1 MGP_BALBcJ_G0033379.1 mouse_genomes_project 8 12065661 12070813 + Arhgef10 protein_coding processed_transcript MGP_BALBcJ_T0089566.1 MGP_BALBcJ_G0033797.1 mouse_genomes_project 8 78585964 78619846 - MGP_BALBcJ_P0089566 Usp38 protein_coding protein_coding MGP_BALBcJ_T0101418.1 MGP_BALBcJ_G0039454.1 mouse_genomes_project 8 93529373 93529508 - Gm26265 snoRNA snoRNA MGP_BALBcJ_T0089340.1 MGP_BALBcJ_G0033721.1 mouse_genomes_project 8 69021705 69033548 - MGP_BALBcJ_P0089340 Ushbp1 protein_coding protein_coding MGP_BALBcJ_T0101372.1 MGP_BALBcJ_G0039408.1 mouse_genomes_project 8 11339718 11339849 - Gm26184 snoRNA snoRNA MGP_BALBcJ_T0088459.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176764 22285094 - MGP_BALBcJ_P0088459 Adam32 protein_coding unknown_likely_coding MGP_BALBcJ_T0088460.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176767 22285103 - MGP_BALBcJ_P0088460 Adam32 protein_coding protein_coding MGP_BALBcJ_T0088461.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176770 22199272 - Adam32 protein_coding retained_intron MGP_BALBcJ_T0088462.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176770 22207563 - MGP_BALBcJ_P0088462 Adam32 protein_coding protein_coding MGP_BALBcJ_T0088463.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176773 22285094 - MGP_BALBcJ_P0088463 Adam32 protein_coding protein_coding MGP_BALBcJ_T0088464.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176773 22219667 - MGP_BALBcJ_P0088464 Adam32 protein_coding protein_coding MGP_BALBcJ_T0088465.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22176832 22198144 - MGP_BALBcJ_P0088465 Adam32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088466.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22248531 22285080 - MGP_BALBcJ_P0088466 Adam32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088467.1 MGP_BALBcJ_G0033451.1 mouse_genomes_project 8 22256370 22285103 - Adam32 protein_coding retained_intron MGP_BALBcJ_T0009067.1 MGP_BALBcJ_G0007290.1 mouse_genomes_project 8 30252923 30316372 - Gm3985 lincRNA lincRNA MGP_BALBcJ_T0009068.1 MGP_BALBcJ_G0007290.1 mouse_genomes_project 8 30254898 30308570 - Gm3985 lincRNA lincRNA MGP_BALBcJ_T0088045.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153283 1175309 + protein_coding retained_intron MGP_BALBcJ_T0088046.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153283 1196372 + MGP_BALBcJ_P0088046 protein_coding protein_coding MGP_BALBcJ_T0088047.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153283 1182040 + MGP_BALBcJ_P0088047 protein_coding protein_coding MGP_BALBcJ_T0088048.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153290 1196533 + MGP_BALBcJ_P0088048 protein_coding protein_coding MGP_BALBcJ_T0088049.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153303 1196367 + MGP_BALBcJ_P0088049 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088050.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153317 1190049 + protein_coding retained_intron MGP_BALBcJ_T0088051.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1153455 1196367 + MGP_BALBcJ_P0088051 protein_coding protein_coding MGP_BALBcJ_T0088052.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1175616 1176458 + protein_coding retained_intron MGP_BALBcJ_T0088053.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1179630 1191400 + protein_coding processed_transcript MGP_BALBcJ_T0088054.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1189121 1194046 + protein_coding retained_intron MGP_BALBcJ_T0088055.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1191695 1196363 + protein_coding retained_intron MGP_BALBcJ_T0088056.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1191939 1194661 + protein_coding retained_intron MGP_BALBcJ_T0088057.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1194049 1194924 + protein_coding retained_intron MGP_BALBcJ_T0088058.1 MGP_BALBcJ_G0033306.1 mouse_genomes_project 8 1194569 1199573 + MGP_BALBcJ_P0088058 protein_coding protein_coding MGP_BALBcJ_T0090836.1 MGP_BALBcJ_G0034207.1 mouse_genomes_project 8 121118381 121118706 + MGP_BALBcJ_P0090836 protein_coding protein_coding MGP_BALBcJ_T0088365.1 MGP_BALBcJ_G0033420.1 mouse_genomes_project 8 19387728 19442268 - MGP_BALBcJ_P0088365 Nek5 protein_coding protein_coding MGP_BALBcJ_T0088366.1 MGP_BALBcJ_G0033420.1 mouse_genomes_project 8 19387745 19442239 - MGP_BALBcJ_P0088366 Nek5 protein_coding unknown_likely_coding MGP_BALBcJ_T0088261.1 MGP_BALBcJ_G0033372.1 mouse_genomes_project 8 10983736 11015692 + MGP_BALBcJ_P0088261 Fbxo25 protein_coding unknown_likely_coding MGP_BALBcJ_T0088262.1 MGP_BALBcJ_G0033372.1 mouse_genomes_project 8 10983801 11015688 + MGP_BALBcJ_P0088262 Fbxo25 protein_coding protein_coding MGP_BALBcJ_T0091009.1 MGP_BALBcJ_G0034259.1 mouse_genomes_project 8 123988149 124067070 - MGP_BALBcJ_P0091009 Sipa1l2 protein_coding protein_coding MGP_BALBcJ_T0101389.1 MGP_BALBcJ_G0039425.1 mouse_genomes_project 8 40822960 40823090 + Gm22986 snoRNA snoRNA MGP_BALBcJ_T0090428.1 MGP_BALBcJ_G0034086.1 mouse_genomes_project 8 107992442 108003737 - MGP_BALBcJ_P0090428 Atxn1l protein_coding protein_coding MGP_BALBcJ_T0088560.1 MGP_BALBcJ_G0033480.1 mouse_genomes_project 8 24587824 24592908 - MGP_BALBcJ_P0088560 Got1l1 protein_coding protein_coding MGP_BALBcJ_T0010985.1 MGP_BALBcJ_G0009110.1 mouse_genomes_project 8 103463122 103463219 - Mir328 miRNA miRNA MGP_BALBcJ_T0088007.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565175 567495 - Pcp2 protein_coding retained_intron MGP_BALBcJ_T0088008.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565175 567495 - MGP_BALBcJ_P0088008 Pcp2 protein_coding protein_coding MGP_BALBcJ_T0088009.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565181 567495 - Pcp2 protein_coding retained_intron MGP_BALBcJ_T0088010.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565181 566952 - MGP_BALBcJ_P0088010 Pcp2 protein_coding protein_coding MGP_BALBcJ_T0088011.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565181 567232 - MGP_BALBcJ_P0088011 Pcp2 protein_coding protein_coding MGP_BALBcJ_T0088012.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565181 566999 - MGP_BALBcJ_P0088012 Pcp2 protein_coding protein_coding MGP_BALBcJ_T0088013.1 MGP_BALBcJ_G0033294.1 mouse_genomes_project 8 565184 567475 - Pcp2 protein_coding processed_transcript MGP_BALBcJ_T0089130.1 MGP_BALBcJ_G0033663.1 mouse_genomes_project 8 67514558 67558322 - MGP_BALBcJ_P0089130 Gatad2a protein_coding unknown_likely_coding MGP_BALBcJ_T0089131.1 MGP_BALBcJ_G0033663.1 mouse_genomes_project 8 67514563 67603288 - MGP_BALBcJ_P0089131 Gatad2a protein_coding protein_coding MGP_BALBcJ_T0089132.1 MGP_BALBcJ_G0033663.1 mouse_genomes_project 8 67514563 67582097 - MGP_BALBcJ_P0089132 Gatad2a protein_coding protein_coding MGP_BALBcJ_T0089133.1 MGP_BALBcJ_G0033663.1 mouse_genomes_project 8 67514563 67603288 - MGP_BALBcJ_P0089133 Gatad2a protein_coding protein_coding MGP_BALBcJ_T0090555.1 MGP_BALBcJ_G0034128.1 mouse_genomes_project 8 110928151 111221943 + Cntnap4 protein_coding retained_intron MGP_BALBcJ_T0090556.1 MGP_BALBcJ_G0034128.1 mouse_genomes_project 8 110928151 111245132 + MGP_BALBcJ_P0090556 Cntnap4 protein_coding protein_coding MGP_BALBcJ_T0090557.1 MGP_BALBcJ_G0034128.1 mouse_genomes_project 8 110928151 111245120 + MGP_BALBcJ_P0090557 Cntnap4 protein_coding protein_coding MGP_BALBcJ_T0090558.1 MGP_BALBcJ_G0034128.1 mouse_genomes_project 8 110928163 111155543 + Cntnap4 protein_coding retained_intron MGP_BALBcJ_T0090559.1 MGP_BALBcJ_G0034128.1 mouse_genomes_project 8 111098457 111100894 + Cntnap4 protein_coding processed_transcript MGP_BALBcJ_T0090560.1 MGP_BALBcJ_G0034128.1 mouse_genomes_project 8 111142513 111160009 + Cntnap4 protein_coding processed_transcript MGP_BALBcJ_T0088117.1 MGP_BALBcJ_G0033327.1 mouse_genomes_project 8 7004873 7011177 - MGP_BALBcJ_P0088117 Lig4 protein_coding protein_coding MGP_BALBcJ_T0088118.1 MGP_BALBcJ_G0033327.1 mouse_genomes_project 8 7005730 7012540 - MGP_BALBcJ_P0088118 Lig4 protein_coding protein_coding MGP_BALBcJ_T0015959.1 MGP_BALBcJ_G0014056.1 mouse_genomes_project 8 73842001 73843009 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088893.1 MGP_BALBcJ_G0033592.1 mouse_genomes_project 8 52215152 52225659 + MGP_BALBcJ_P0088893 Spata4 protein_coding protein_coding MGP_BALBcJ_T0089840.1 MGP_BALBcJ_G0033875.1 mouse_genomes_project 8 82965078 82973918 + MGP_BALBcJ_P0089840 Orc6 protein_coding protein_coding MGP_BALBcJ_T0089841.1 MGP_BALBcJ_G0033875.1 mouse_genomes_project 8 82965078 82973918 + MGP_BALBcJ_P0089841 Orc6 protein_coding protein_coding MGP_BALBcJ_T0090291.1 MGP_BALBcJ_G0034033.1 mouse_genomes_project 8 103946849 104007190 - MGP_BALBcJ_P0090291 Ranbp10 protein_coding protein_coding MGP_BALBcJ_T0089469.1 MGP_BALBcJ_G0033763.1 mouse_genomes_project 8 70251211 70266482 + MGP_BALBcJ_P0089469 Tmem38a protein_coding protein_coding MGP_BALBcJ_T0090007.1 MGP_BALBcJ_G0033925.1 mouse_genomes_project 8 91740505 91782099 - MGP_BALBcJ_P0090007 Amfr protein_coding protein_coding MGP_BALBcJ_T0090008.1 MGP_BALBcJ_G0033925.1 mouse_genomes_project 8 91741819 91743834 - Amfr protein_coding retained_intron MGP_BALBcJ_T0090009.1 MGP_BALBcJ_G0033925.1 mouse_genomes_project 8 91741875 91742879 - Amfr protein_coding processed_transcript MGP_BALBcJ_T0090010.1 MGP_BALBcJ_G0033925.1 mouse_genomes_project 8 91768674 91781563 - MGP_BALBcJ_P0090010 Amfr protein_coding protein_coding MGP_BALBcJ_T0088434.1 MGP_BALBcJ_G0033444.1 mouse_genomes_project 8 21500237 21511937 + MGP_BALBcJ_P0088434 protein_coding protein_coding MGP_BALBcJ_T0010962.1 MGP_BALBcJ_G0009087.1 mouse_genomes_project 8 81736887 81736975 + Mir709 miRNA miRNA MGP_BALBcJ_T0090546.1 MGP_BALBcJ_G0034124.1 mouse_genomes_project 8 110268352 110281274 + MGP_BALBcJ_P0090546 Gabarapl2 protein_coding protein_coding MGP_BALBcJ_T0090547.1 MGP_BALBcJ_G0034124.1 mouse_genomes_project 8 110268407 110269421 + Gabarapl2 protein_coding retained_intron MGP_BALBcJ_T0090548.1 MGP_BALBcJ_G0034124.1 mouse_genomes_project 8 110268717 110280409 + Gabarapl2 protein_coding retained_intron MGP_BALBcJ_T0089498.1 MGP_BALBcJ_G0033773.1 mouse_genomes_project 8 72786101 72796442 + MGP_BALBcJ_P0089498 Rasd2 protein_coding protein_coding MGP_BALBcJ_T0089499.1 MGP_BALBcJ_G0033773.1 mouse_genomes_project 8 72786659 72794748 + MGP_BALBcJ_P0089499 Rasd2 protein_coding protein_coding MGP_BALBcJ_T0101399.1 MGP_BALBcJ_G0039435.1 mouse_genomes_project 8 60664864 60664998 - Gm24236 snoRNA snoRNA MGP_BALBcJ_T0088730.1 MGP_BALBcJ_G0033542.1 mouse_genomes_project 8 40583259 40593865 - MGP_BALBcJ_P0088730 Triml1 protein_coding protein_coding MGP_BALBcJ_T0090108.1 MGP_BALBcJ_G0033959.1 mouse_genomes_project 8 93103509 93115817 + Usb1 protein_coding retained_intron MGP_BALBcJ_T0090109.1 MGP_BALBcJ_G0033959.1 mouse_genomes_project 8 93103546 93119059 + MGP_BALBcJ_P0090109 Usb1 protein_coding protein_coding MGP_BALBcJ_T0090110.1 MGP_BALBcJ_G0033959.1 mouse_genomes_project 8 93116696 93118376 + Usb1 protein_coding retained_intron MGP_BALBcJ_T0009093.1 MGP_BALBcJ_G0007312.1 mouse_genomes_project 8 70172752 70185231 + Gm17435 lincRNA lincRNA MGP_BALBcJ_T0088862.1 MGP_BALBcJ_G0033581.1 mouse_genomes_project 8 45358454 45359427 + MGP_BALBcJ_P0088862 Cldn24 protein_coding protein_coding MGP_BALBcJ_T0089676.1 MGP_BALBcJ_G0033837.1 mouse_genomes_project 8 81901739 81909154 - MGP_BALBcJ_P0089676 Mri1 protein_coding protein_coding MGP_BALBcJ_T0089677.1 MGP_BALBcJ_G0033837.1 mouse_genomes_project 8 81902854 81908243 - MGP_BALBcJ_P0089677 Mri1 protein_coding protein_coding MGP_BALBcJ_T0089678.1 MGP_BALBcJ_G0033837.1 mouse_genomes_project 8 81905748 81909077 - MGP_BALBcJ_P0089678 Mri1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089679.1 MGP_BALBcJ_G0033837.1 mouse_genomes_project 8 81906062 81909156 - Mri1 protein_coding processed_transcript MGP_BALBcJ_T0089680.1 MGP_BALBcJ_G0033837.1 mouse_genomes_project 8 81907619 81909156 - Mri1 protein_coding retained_intron MGP_BALBcJ_T0098397.1 MGP_BALBcJ_G0036451.1 mouse_genomes_project 8 32304201 32305356 + pseudogene pseudogene MGP_BALBcJ_T0100147.1 MGP_BALBcJ_G0038183.1 mouse_genomes_project 8 102638645 102638752 + Gm22148 snRNA snRNA MGP_BALBcJ_T0088642.1 MGP_BALBcJ_G0033516.1 mouse_genomes_project 8 33146720 33198863 + MGP_BALBcJ_P0088642 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0090165.1 MGP_BALBcJ_G0033985.1 mouse_genomes_project 8 102580215 102642475 - MGP_BALBcJ_P0090165 Terb1 protein_coding protein_coding MGP_BALBcJ_T0090166.1 MGP_BALBcJ_G0033985.1 mouse_genomes_project 8 102580533 102642471 - MGP_BALBcJ_P0090166 Terb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090167.1 MGP_BALBcJ_G0033985.1 mouse_genomes_project 8 102580534 102642470 - MGP_BALBcJ_P0090167 Terb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090168.1 MGP_BALBcJ_G0033985.1 mouse_genomes_project 8 102581258 102642498 - MGP_BALBcJ_P0090168 Terb1 protein_coding protein_coding MGP_BALBcJ_T0005381.1 MGP_BALBcJ_G0004562.1 mouse_genomes_project 8 121228629 121230937 + Gm10612 antisense antisense MGP_BALBcJ_T0089459.1 MGP_BALBcJ_G0033758.1 mouse_genomes_project 8 70116957 70140650 + MGP_BALBcJ_P0089459 1700030K09Rik protein_coding protein_coding MGP_BALBcJ_T0089460.1 MGP_BALBcJ_G0033758.1 mouse_genomes_project 8 70117009 70140290 + MGP_BALBcJ_P0089460 1700030K09Rik protein_coding protein_coding MGP_BALBcJ_T0089461.1 MGP_BALBcJ_G0033758.1 mouse_genomes_project 8 70137093 70138073 + 1700030K09Rik protein_coding retained_intron MGP_BALBcJ_T0089284.1 MGP_BALBcJ_G0033703.1 mouse_genomes_project 8 68399139 68401413 - MGP_BALBcJ_P0089284 Mpv17l2 protein_coding protein_coding MGP_BALBcJ_T0015936.1 MGP_BALBcJ_G0014033.1 mouse_genomes_project 8 31650837 31651224 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088699.1 MGP_BALBcJ_G0033534.1 mouse_genomes_project 8 38213071 38259870 + MGP_BALBcJ_P0088699 protein_coding protein_coding MGP_BALBcJ_T0088519.1 MGP_BALBcJ_G0033465.1 mouse_genomes_project 8 23159478 23166064 + MGP_BALBcJ_P0088519 Star protein_coding protein_coding MGP_BALBcJ_T0009097.1 MGP_BALBcJ_G0007315.1 mouse_genomes_project 8 76884390 76896953 + Gm4890 lincRNA lincRNA MGP_BALBcJ_T0018436.1 MGP_BALBcJ_G0015656.1 mouse_genomes_project 8 74143058 74462709 - processed_transcript processed_transcript MGP_BALBcJ_T0018437.1 MGP_BALBcJ_G0015656.1 mouse_genomes_project 8 74314859 74462897 - processed_transcript processed_transcript MGP_BALBcJ_T0018438.1 MGP_BALBcJ_G0015656.1 mouse_genomes_project 8 74406334 74463345 - processed_transcript retained_intron MGP_BALBcJ_T0100143.1 MGP_BALBcJ_G0038179.1 mouse_genomes_project 8 89800839 89800943 + Gm24254 snRNA snRNA MGP_BALBcJ_T0090294.1 MGP_BALBcJ_G0034036.1 mouse_genomes_project 8 104035192 104037040 + MGP_BALBcJ_P0090294 Thap11 protein_coding protein_coding MGP_BALBcJ_T0101386.1 MGP_BALBcJ_G0039422.1 mouse_genomes_project 8 36426028 36426161 - Gm23128 snoRNA snoRNA MGP_BALBcJ_T0009160.1 MGP_BALBcJ_G0007357.1 mouse_genomes_project 8 118587564 118589887 + A130014A01Rik lincRNA lincRNA MGP_BALBcJ_T0010934.1 MGP_BALBcJ_G0009059.1 mouse_genomes_project 8 16723158 16723248 - Gm27852 miRNA miRNA MGP_BALBcJ_T0088354.1 MGP_BALBcJ_G0033414.1 mouse_genomes_project 8 19251251 19251470 + MGP_BALBcJ_P0088354 Defb35 protein_coding protein_coding MGP_BALBcJ_T0090195.1 MGP_BALBcJ_G0033995.1 mouse_genomes_project 8 103065697 103074110 + MGP_BALBcJ_P0090195 Ces2e protein_coding protein_coding MGP_BALBcJ_T0090196.1 MGP_BALBcJ_G0033995.1 mouse_genomes_project 8 103065697 103074110 + MGP_BALBcJ_P0090196 Ces2e protein_coding protein_coding MGP_BALBcJ_T0100138.1 MGP_BALBcJ_G0038174.1 mouse_genomes_project 8 79779352 79779415 - Gm25267 snRNA snRNA MGP_BALBcJ_T0089529.1 MGP_BALBcJ_G0033782.1 mouse_genomes_project 8 76078225 76081883 - MGP_BALBcJ_P0089529 protein_coding protein_coding MGP_BALBcJ_T0015988.1 MGP_BALBcJ_G0014085.1 mouse_genomes_project 8 122565807 122566498 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010969.1 MGP_BALBcJ_G0009094.1 mouse_genomes_project 8 82539669 82539731 + Mir7069 miRNA miRNA MGP_BALBcJ_T0089037.1 MGP_BALBcJ_G0033636.1 mouse_genomes_project 8 65075803 65100613 + MGP_BALBcJ_P0089037 Nat3 protein_coding protein_coding MGP_BALBcJ_T0089839.1 MGP_BALBcJ_G0033874.1 mouse_genomes_project 8 82926970 82964960 - MGP_BALBcJ_P0089839 Vps35 protein_coding protein_coding MGP_BALBcJ_T0100144.1 MGP_BALBcJ_G0038180.1 mouse_genomes_project 8 95010212 95010314 + Gm25160 snRNA snRNA MGP_BALBcJ_T0098666.1 MGP_BALBcJ_G0036720.1 mouse_genomes_project 8 126216671 126216789 + Gm22968 rRNA rRNA MGP_BALBcJ_T0010932.1 MGP_BALBcJ_G0009057.1 mouse_genomes_project 8 11416559 11416667 + Gm44347 miRNA miRNA MGP_BALBcJ_T0088470.1 MGP_BALBcJ_G0033454.1 mouse_genomes_project 8 22361662 22375194 - MGP_BALBcJ_P0088470 Htra4 protein_coding protein_coding MGP_BALBcJ_T0088471.1 MGP_BALBcJ_G0033454.1 mouse_genomes_project 8 22365867 22373562 - Htra4 protein_coding retained_intron MGP_BALBcJ_T0088569.1 MGP_BALBcJ_G0033487.1 mouse_genomes_project 8 27535355 27539840 - MGP_BALBcJ_P0088569 Tex24 protein_coding protein_coding MGP_BALBcJ_T0090234.1 MGP_BALBcJ_G0034009.1 mouse_genomes_project 8 103433526 103443782 - MGP_BALBcJ_P0090234 4931428F04Rik protein_coding protein_coding MGP_BALBcJ_T0090235.1 MGP_BALBcJ_G0034009.1 mouse_genomes_project 8 103433526 103443782 - MGP_BALBcJ_P0090235 4931428F04Rik protein_coding protein_coding MGP_BALBcJ_T0090080.1 MGP_BALBcJ_G0033950.1 mouse_genomes_project 8 92693966 92714184 + MGP_BALBcJ_P0090080 Adgrg5 protein_coding protein_coding MGP_BALBcJ_T0090081.1 MGP_BALBcJ_G0033950.1 mouse_genomes_project 8 92693966 92714194 + MGP_BALBcJ_P0090081 Adgrg5 protein_coding protein_coding MGP_BALBcJ_T0090082.1 MGP_BALBcJ_G0033950.1 mouse_genomes_project 8 92693966 92705551 + MGP_BALBcJ_P0090082 Adgrg5 protein_coding protein_coding MGP_BALBcJ_T0090083.1 MGP_BALBcJ_G0033950.1 mouse_genomes_project 8 92693971 92714184 + MGP_BALBcJ_P0090083 Adgrg5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090084.1 MGP_BALBcJ_G0033950.1 mouse_genomes_project 8 92705201 92706119 + Adgrg5 protein_coding processed_transcript MGP_BALBcJ_T0088585.1 MGP_BALBcJ_G0033495.1 mouse_genomes_project 8 29331082 29392156 - MGP_BALBcJ_P0088585 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0015945.1 MGP_BALBcJ_G0014042.1 mouse_genomes_project 8 39515056 39516706 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089029.1 MGP_BALBcJ_G0033630.1 mouse_genomes_project 8 64052500 64054521 + MGP_BALBcJ_P0089029 Tktl2 protein_coding protein_coding MGP_BALBcJ_T0089030.1 MGP_BALBcJ_G0033630.1 mouse_genomes_project 8 64052503 64059070 + MGP_BALBcJ_P0089030 Tktl2 protein_coding protein_coding MGP_BALBcJ_T0088591.1 MGP_BALBcJ_G0033499.1 mouse_genomes_project 8 30863804 30903505 + MGP_BALBcJ_P0088591 Tex15 protein_coding protein_coding MGP_BALBcJ_T0088592.1 MGP_BALBcJ_G0033499.1 mouse_genomes_project 8 30864388 30932310 + MGP_BALBcJ_P0088592 Tex15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088593.1 MGP_BALBcJ_G0033499.1 mouse_genomes_project 8 30864388 30920276 + MGP_BALBcJ_P0088593 Tex15 protein_coding protein_coding MGP_BALBcJ_T0088594.1 MGP_BALBcJ_G0033499.1 mouse_genomes_project 8 30917261 30932310 + MGP_BALBcJ_P0088594 Tex15 protein_coding protein_coding MGP_BALBcJ_T0089749.1 MGP_BALBcJ_G0033851.1 mouse_genomes_project 8 82527392 82540980 + MGP_BALBcJ_P0089749 Farsa protein_coding protein_coding MGP_BALBcJ_T0089750.1 MGP_BALBcJ_G0033851.1 mouse_genomes_project 8 82527398 82540979 + Farsa protein_coding retained_intron MGP_BALBcJ_T0089751.1 MGP_BALBcJ_G0033851.1 mouse_genomes_project 8 82527412 82538744 + Farsa protein_coding retained_intron MGP_BALBcJ_T0089752.1 MGP_BALBcJ_G0033851.1 mouse_genomes_project 8 82527420 82540980 + MGP_BALBcJ_P0089752 Farsa protein_coding protein_coding MGP_BALBcJ_T0089753.1 MGP_BALBcJ_G0033851.1 mouse_genomes_project 8 82527423 82540979 + MGP_BALBcJ_P0089753 Farsa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089754.1 MGP_BALBcJ_G0033851.1 mouse_genomes_project 8 82539285 82540733 + Farsa protein_coding retained_intron MGP_BALBcJ_T0090563.1 MGP_BALBcJ_G0034130.1 mouse_genomes_project 8 112015551 112027961 + MGP_BALBcJ_P0090563 Syce1l protein_coding protein_coding MGP_BALBcJ_T0090564.1 MGP_BALBcJ_G0034130.1 mouse_genomes_project 8 112015551 112027961 + MGP_BALBcJ_P0090564 Syce1l protein_coding protein_coding MGP_BALBcJ_T0090406.1 MGP_BALBcJ_G0034076.1 mouse_genomes_project 8 105825652 105833621 - MGP_BALBcJ_P0090406 Psmd7 protein_coding protein_coding MGP_BALBcJ_T0101422.1 MGP_BALBcJ_G0039458.1 mouse_genomes_project 8 108103765 108103850 + Snord71 snoRNA snoRNA MGP_BALBcJ_T0090160.1 MGP_BALBcJ_G0033980.1 mouse_genomes_project 8 102451044 102451265 + MGP_BALBcJ_P0090160 Gm11020 protein_coding protein_coding MGP_BALBcJ_T0088643.1 MGP_BALBcJ_G0033517.1 mouse_genomes_project 8 33205550 33207403 - MGP_BALBcJ_P0088643 Cldn23 protein_coding protein_coding MGP_BALBcJ_T0090776.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120471762 120519013 + MGP_BALBcJ_P0090776 Banp protein_coding protein_coding MGP_BALBcJ_T0090777.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472504 120548235 + MGP_BALBcJ_P0090777 Banp protein_coding protein_coding MGP_BALBcJ_T0090778.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472556 120551316 + MGP_BALBcJ_P0090778 Banp protein_coding protein_coding MGP_BALBcJ_T0090779.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472587 120519011 + MGP_BALBcJ_P0090779 Banp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090780.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472592 120548003 + MGP_BALBcJ_P0090780 Banp protein_coding protein_coding MGP_BALBcJ_T0090781.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472597 120513399 + MGP_BALBcJ_P0090781 Banp protein_coding protein_coding MGP_BALBcJ_T0090782.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472608 120513390 + MGP_BALBcJ_P0090782 Banp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090783.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120472617 120513416 + MGP_BALBcJ_P0090783 Banp protein_coding protein_coding MGP_BALBcJ_T0090784.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120496267 120498319 + Banp protein_coding retained_intron MGP_BALBcJ_T0090785.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120496315 120547701 + MGP_BALBcJ_P0090785 Banp protein_coding protein_coding MGP_BALBcJ_T0090786.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120500153 120511831 + Banp protein_coding retained_intron MGP_BALBcJ_T0090787.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120513287 120519068 + Banp protein_coding retained_intron MGP_BALBcJ_T0090788.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120513433 120548016 + MGP_BALBcJ_P0090788 Banp protein_coding protein_coding MGP_BALBcJ_T0090789.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120518918 120547673 + MGP_BALBcJ_P0090789 Banp protein_coding protein_coding MGP_BALBcJ_T0090790.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120522497 120542359 + Banp protein_coding processed_transcript MGP_BALBcJ_T0090791.1 MGP_BALBcJ_G0034193.1 mouse_genomes_project 8 120522675 120528973 + Banp protein_coding retained_intron MGP_BALBcJ_T0090213.1 MGP_BALBcJ_G0034003.1 mouse_genomes_project 8 103375883 103403419 + MGP_BALBcJ_P0090213 D230025D16Rik protein_coding protein_coding MGP_BALBcJ_T0090214.1 MGP_BALBcJ_G0034003.1 mouse_genomes_project 8 103375944 103401491 + D230025D16Rik protein_coding retained_intron MGP_BALBcJ_T0090215.1 MGP_BALBcJ_G0034003.1 mouse_genomes_project 8 103375944 103403122 + MGP_BALBcJ_P0090215 D230025D16Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090216.1 MGP_BALBcJ_G0034003.1 mouse_genomes_project 8 103376005 103403419 + MGP_BALBcJ_P0090216 D230025D16Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090217.1 MGP_BALBcJ_G0034003.1 mouse_genomes_project 8 103381699 103390748 + MGP_BALBcJ_P0090217 D230025D16Rik protein_coding protein_coding MGP_BALBcJ_T0090218.1 MGP_BALBcJ_G0034003.1 mouse_genomes_project 8 103396858 103402131 + D230025D16Rik protein_coding retained_intron MGP_BALBcJ_T0090149.1 MGP_BALBcJ_G0033974.1 mouse_genomes_project 8 102201793 102250081 + MGP_BALBcJ_P0090149 Cdh5 protein_coding protein_coding MGP_BALBcJ_T0090774.1 MGP_BALBcJ_G0034192.1 mouse_genomes_project 8 120438258 120466971 - MGP_BALBcJ_P0090774 Car5a protein_coding protein_coding MGP_BALBcJ_T0090775.1 MGP_BALBcJ_G0034192.1 mouse_genomes_project 8 120439823 120449602 - Car5a protein_coding processed_transcript MGP_BALBcJ_T0088037.1 MGP_BALBcJ_G0033301.1 mouse_genomes_project 8 686066 691653 - MGP_BALBcJ_P0088037 Cd209a protein_coding protein_coding MGP_BALBcJ_T0009058.1 MGP_BALBcJ_G0007282.1 mouse_genomes_project 8 19797797 19800881 + Gm17491 lincRNA lincRNA MGP_BALBcJ_T0102836.1 MGP_BALBcJ_G0040651.1 mouse_genomes_project 8 16489988 16490927 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101432.1 MGP_BALBcJ_G0039468.1 mouse_genomes_project 8 122023241 122023355 + Gm25428 snoRNA snoRNA MGP_BALBcJ_T0015966.1 MGP_BALBcJ_G0014063.1 mouse_genomes_project 8 78802329 78802917 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090975.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123240037 123290440 - MGP_BALBcJ_P0090975 Ttc13 protein_coding unknown_likely_coding MGP_BALBcJ_T0090976.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123240047 123290461 - MGP_BALBcJ_P0090976 Ttc13 protein_coding protein_coding MGP_BALBcJ_T0090977.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123240047 123290442 - MGP_BALBcJ_P0090977 Ttc13 protein_coding protein_coding MGP_BALBcJ_T0090978.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123240047 123290450 - MGP_BALBcJ_P0090978 Ttc13 protein_coding protein_coding MGP_BALBcJ_T0090979.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123242160 123242931 - Ttc13 protein_coding retained_intron MGP_BALBcJ_T0090980.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123242666 123244192 - Ttc13 protein_coding retained_intron MGP_BALBcJ_T0090981.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123242810 123248002 - Ttc13 protein_coding retained_intron MGP_BALBcJ_T0090982.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123248088 123251580 - Ttc13 protein_coding retained_intron MGP_BALBcJ_T0090983.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123248595 123251172 - Ttc13 protein_coding retained_intron MGP_BALBcJ_T0090984.1 MGP_BALBcJ_G0034248.1 mouse_genomes_project 8 123275982 123290459 - Ttc13 protein_coding retained_intron MGP_BALBcJ_T0089010.1 MGP_BALBcJ_G0033625.1 mouse_genomes_project 8 62566235 62586944 - MGP_BALBcJ_P0089010 Trim60 protein_coding protein_coding MGP_BALBcJ_T0099023.1 MGP_BALBcJ_G0037065.1 mouse_genomes_project 8 119015244 119016316 + Gm26971 sense_intronic sense_intronic MGP_BALBcJ_T0101408.1 MGP_BALBcJ_G0039444.1 mouse_genomes_project 8 73577807 73577934 - Gm22544 snoRNA snoRNA MGP_BALBcJ_T0100154.1 MGP_BALBcJ_G0038190.1 mouse_genomes_project 8 111908936 111909098 - Gm24291 snRNA snRNA MGP_BALBcJ_T0089470.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70299190 70365827 + MGP_BALBcJ_P0089470 Nwd1 protein_coding protein_coding MGP_BALBcJ_T0089471.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70299196 70347667 + MGP_BALBcJ_P0089471 Nwd1 protein_coding protein_coding MGP_BALBcJ_T0089472.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70299207 70361939 + MGP_BALBcJ_P0089472 Nwd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089473.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70299256 70368682 + MGP_BALBcJ_P0089473 Nwd1 protein_coding protein_coding MGP_BALBcJ_T0089474.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70306750 70362009 + MGP_BALBcJ_P0089474 Nwd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089475.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70310356 70361970 + MGP_BALBcJ_P0089475 Nwd1 protein_coding protein_coding MGP_BALBcJ_T0089476.1 MGP_BALBcJ_G0033764.1 mouse_genomes_project 8 70335753 70347064 + Nwd1 protein_coding processed_transcript MGP_BALBcJ_T0090447.1 MGP_BALBcJ_G0034096.1 mouse_genomes_project 8 108488329 108493879 + MGP_BALBcJ_P0090447 Cmtr2 protein_coding protein_coding MGP_BALBcJ_T0090448.1 MGP_BALBcJ_G0034096.1 mouse_genomes_project 8 108490653 108497151 + MGP_BALBcJ_P0090448 Cmtr2 protein_coding protein_coding MGP_BALBcJ_T0090750.1 MGP_BALBcJ_G0034187.1 mouse_genomes_project 8 120117752 120126426 + MGP_BALBcJ_P0090750 Map1lc3b protein_coding protein_coding MGP_BALBcJ_T0090751.1 MGP_BALBcJ_G0034187.1 mouse_genomes_project 8 120117868 120120501 + Map1lc3b protein_coding retained_intron MGP_BALBcJ_T0090752.1 MGP_BALBcJ_G0034187.1 mouse_genomes_project 8 120117872 120125712 + Map1lc3b protein_coding retained_intron MGP_BALBcJ_T0011689.1 MGP_BALBcJ_G0009814.1 mouse_genomes_project 8 1100630 1100883 - Gm23888 misc_RNA misc_RNA MGP_BALBcJ_T0089644.1 MGP_BALBcJ_G0033821.1 mouse_genomes_project 8 81644414 81646340 + MGP_BALBcJ_P0089644 protein_coding unknown_likely_coding MGP_BALBcJ_T0089292.1 MGP_BALBcJ_G0033706.1 mouse_genomes_project 8 68418709 68433013 - MGP_BALBcJ_P0089292 Mast3 protein_coding protein_coding MGP_BALBcJ_T0089006.1 MGP_BALBcJ_G0033622.1 mouse_genomes_project 8 62312009 62422981 - MGP_BALBcJ_P0089006 Klhl2 protein_coding protein_coding MGP_BALBcJ_T0090222.1 MGP_BALBcJ_G0034005.1 mouse_genomes_project 8 103408469 103417726 - MGP_BALBcJ_P0090222 Tradd protein_coding protein_coding MGP_BALBcJ_T0090223.1 MGP_BALBcJ_G0034005.1 mouse_genomes_project 8 103409373 103410304 - Tradd protein_coding retained_intron MGP_BALBcJ_T0090224.1 MGP_BALBcJ_G0034005.1 mouse_genomes_project 8 103409466 103417698 - MGP_BALBcJ_P0090224 Tradd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090225.1 MGP_BALBcJ_G0034005.1 mouse_genomes_project 8 103409940 103417720 - MGP_BALBcJ_P0090225 Tradd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100150.1 MGP_BALBcJ_G0038186.1 mouse_genomes_project 8 108104970 108105072 - Gm25321 snRNA snRNA MGP_BALBcJ_T0089437.1 MGP_BALBcJ_G0033747.1 mouse_genomes_project 8 69685080 69706123 - MGP_BALBcJ_P0089437 Cyp4f18 protein_coding protein_coding MGP_BALBcJ_T0089438.1 MGP_BALBcJ_G0033747.1 mouse_genomes_project 8 69685081 69689518 - Cyp4f18 protein_coding processed_transcript MGP_BALBcJ_T0089439.1 MGP_BALBcJ_G0033747.1 mouse_genomes_project 8 69686153 69689833 - Cyp4f18 protein_coding processed_transcript MGP_BALBcJ_T0089909.1 MGP_BALBcJ_G0033894.1 mouse_genomes_project 8 85991605 86052141 + MGP_BALBcJ_P0089909 Adcy7 protein_coding protein_coding MGP_BALBcJ_T0089910.1 MGP_BALBcJ_G0033894.1 mouse_genomes_project 8 86002820 86052141 + MGP_BALBcJ_P0089910 Adcy7 protein_coding protein_coding MGP_BALBcJ_T0089911.1 MGP_BALBcJ_G0033894.1 mouse_genomes_project 8 86008942 86052141 + MGP_BALBcJ_P0089911 Adcy7 protein_coding protein_coding MGP_BALBcJ_T0089912.1 MGP_BALBcJ_G0033894.1 mouse_genomes_project 8 86014076 86052141 + MGP_BALBcJ_P0089912 Adcy7 protein_coding protein_coding MGP_BALBcJ_T0089559.1 MGP_BALBcJ_G0033795.1 mouse_genomes_project 8 78294790 78335395 - MGP_BALBcJ_P0089559 Smarca5 protein_coding unknown_likely_coding MGP_BALBcJ_T0089560.1 MGP_BALBcJ_G0033795.1 mouse_genomes_project 8 78300631 78335724 - Smarca5 protein_coding processed_transcript MGP_BALBcJ_T0089561.1 MGP_BALBcJ_G0033795.1 mouse_genomes_project 8 78304755 78307343 - Smarca5 protein_coding retained_intron MGP_BALBcJ_T0089562.1 MGP_BALBcJ_G0033795.1 mouse_genomes_project 8 78305382 78306506 - Smarca5 protein_coding retained_intron MGP_BALBcJ_T0089563.1 MGP_BALBcJ_G0033795.1 mouse_genomes_project 8 78311989 78313610 - Smarca5 protein_coding retained_intron MGP_BALBcJ_T0089564.1 MGP_BALBcJ_G0033795.1 mouse_genomes_project 8 78321785 78322596 - Smarca5 protein_coding retained_intron MGP_BALBcJ_T0088673.1 MGP_BALBcJ_G0033528.1 mouse_genomes_project 8 37822655 37879760 + MGP_BALBcJ_P0088673 Zdhhc2 protein_coding protein_coding MGP_BALBcJ_T0088674.1 MGP_BALBcJ_G0033528.1 mouse_genomes_project 8 37822661 37904308 + MGP_BALBcJ_P0088674 Zdhhc2 protein_coding protein_coding MGP_BALBcJ_T0088675.1 MGP_BALBcJ_G0033528.1 mouse_genomes_project 8 37822662 37864189 + Zdhhc2 protein_coding retained_intron MGP_BALBcJ_T0088676.1 MGP_BALBcJ_G0033528.1 mouse_genomes_project 8 37822680 37878299 + MGP_BALBcJ_P0088676 Zdhhc2 protein_coding protein_coding MGP_BALBcJ_T0088677.1 MGP_BALBcJ_G0033528.1 mouse_genomes_project 8 37822944 37852595 + Zdhhc2 protein_coding processed_transcript MGP_BALBcJ_T0088685.1 MGP_BALBcJ_G0033528.1 mouse_genomes_project 8 37894606 37904310 + Zdhhc2 protein_coding processed_transcript MGP_BALBcJ_T0088349.1 MGP_BALBcJ_G0033409.1 mouse_genomes_project 8 19153164 19156745 + MGP_BALBcJ_P0088349 Defb2 protein_coding protein_coding MGP_BALBcJ_T0102839.1 MGP_BALBcJ_G0040654.1 mouse_genomes_project 8 18141073 18142071 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0090283.1 MGP_BALBcJ_G0034028.1 mouse_genomes_project 8 103874894 103877831 - MGP_BALBcJ_P0090283 Acd protein_coding protein_coding MGP_BALBcJ_T0089974.1 MGP_BALBcJ_G0033915.1 mouse_genomes_project 8 90782554 90809391 - MGP_BALBcJ_P0089974 Ces1a protein_coding protein_coding MGP_BALBcJ_T0101370.1 MGP_BALBcJ_G0039406.1 mouse_genomes_project 8 4666064 4666193 + Gm25169 snoRNA snoRNA MGP_BALBcJ_T0015970.1 MGP_BALBcJ_G0014067.1 mouse_genomes_project 8 80224361 80225319 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088884.1 MGP_BALBcJ_G0033588.1 mouse_genomes_project 8 51206489 51257106 - MGP_BALBcJ_P0088884 Neil3 protein_coding protein_coding MGP_BALBcJ_T0088885.1 MGP_BALBcJ_G0033588.1 mouse_genomes_project 8 51225173 51231007 - Neil3 protein_coding processed_transcript MGP_BALBcJ_T0088886.1 MGP_BALBcJ_G0033588.1 mouse_genomes_project 8 51225173 51231061 - MGP_BALBcJ_P0088886 Neil3 protein_coding protein_coding MGP_BALBcJ_T0088887.1 MGP_BALBcJ_G0033588.1 mouse_genomes_project 8 51225199 51232142 - MGP_BALBcJ_P0088887 Neil3 protein_coding protein_coding MGP_BALBcJ_T0088888.1 MGP_BALBcJ_G0033588.1 mouse_genomes_project 8 51225852 51257007 - Neil3 protein_coding retained_intron MGP_BALBcJ_T0088889.1 MGP_BALBcJ_G0033588.1 mouse_genomes_project 8 51229085 51256719 - MGP_BALBcJ_P0088889 Neil3 protein_coding protein_coding MGP_BALBcJ_T0090919.1 MGP_BALBcJ_G0034226.1 mouse_genomes_project 8 121930863 121958723 + MGP_BALBcJ_P0090919 Tcf25 protein_coding protein_coding MGP_BALBcJ_T0090920.1 MGP_BALBcJ_G0034226.1 mouse_genomes_project 8 121930874 121961004 + MGP_BALBcJ_P0090920 Tcf25 protein_coding protein_coding MGP_BALBcJ_T0088372.1 MGP_BALBcJ_G0033423.1 mouse_genomes_project 8 19507141 19535826 + MGP_BALBcJ_P0088372 Vps36 protein_coding protein_coding MGP_BALBcJ_T0088373.1 MGP_BALBcJ_G0033423.1 mouse_genomes_project 8 19507174 19521106 + Vps36 protein_coding processed_transcript MGP_BALBcJ_T0088374.1 MGP_BALBcJ_G0033423.1 mouse_genomes_project 8 19531975 19533615 + Vps36 protein_coding retained_intron MGP_BALBcJ_T0089420.1 MGP_BALBcJ_G0033744.1 mouse_genomes_project 8 69605668 69613341 + MGP_BALBcJ_P0089420 Zfp882 protein_coding protein_coding MGP_BALBcJ_T0089421.1 MGP_BALBcJ_G0033744.1 mouse_genomes_project 8 69605717 69610627 + MGP_BALBcJ_P0089421 Zfp882 protein_coding protein_coding MGP_BALBcJ_T0089422.1 MGP_BALBcJ_G0033744.1 mouse_genomes_project 8 69605965 69610631 + MGP_BALBcJ_P0089422 Zfp882 protein_coding protein_coding MGP_BALBcJ_T0009090.1 MGP_BALBcJ_G0007309.1 mouse_genomes_project 8 65774820 65782127 - lincRNA lincRNA MGP_BALBcJ_T0009126.1 MGP_BALBcJ_G0007336.1 mouse_genomes_project 8 85762348 85835060 - lincRNA lincRNA MGP_BALBcJ_T0088001.1 MGP_BALBcJ_G0033292.1 mouse_genomes_project 8 548784 562190 - Xab2 protein_coding retained_intron MGP_BALBcJ_T0088002.1 MGP_BALBcJ_G0033292.1 mouse_genomes_project 8 550450 562201 - MGP_BALBcJ_P0088002 Xab2 protein_coding protein_coding MGP_BALBcJ_T0088003.1 MGP_BALBcJ_G0033292.1 mouse_genomes_project 8 550453 562187 - Xab2 protein_coding retained_intron MGP_BALBcJ_T0088004.1 MGP_BALBcJ_G0033292.1 mouse_genomes_project 8 554680 562155 - MGP_BALBcJ_P0088004 Xab2 protein_coding protein_coding MGP_BALBcJ_T0088005.1 MGP_BALBcJ_G0033292.1 mouse_genomes_project 8 556358 562167 - MGP_BALBcJ_P0088005 Xab2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002324.1 MGP_BALBcJ_G0002235.1 mouse_genomes_project 8 20530538 20531389 + TEC TEC MGP_BALBcJ_T0010945.1 MGP_BALBcJ_G0009070.1 mouse_genomes_project 8 54215420 54215529 + Gm25992 miRNA miRNA MGP_BALBcJ_T0090610.1 MGP_BALBcJ_G0034147.1 mouse_genomes_project 8 115697002 115904451 + MGP_BALBcJ_P0090610 Cmip protein_coding protein_coding MGP_BALBcJ_T0090611.1 MGP_BALBcJ_G0034147.1 mouse_genomes_project 8 115790904 115904451 + MGP_BALBcJ_P0090611 Cmip protein_coding protein_coding MGP_BALBcJ_T0089882.1 MGP_BALBcJ_G0033886.1 mouse_genomes_project 8 84424504 84425409 + MGP_BALBcJ_P0089882 Gm10638 protein_coding protein_coding MGP_BALBcJ_T0090566.1 MGP_BALBcJ_G0034132.1 mouse_genomes_project 8 112514347 112536159 + MGP_BALBcJ_P0090566 Nudt7 protein_coding protein_coding MGP_BALBcJ_T0090567.1 MGP_BALBcJ_G0034132.1 mouse_genomes_project 8 112514364 112533724 + MGP_BALBcJ_P0090567 Nudt7 protein_coding protein_coding MGP_BALBcJ_T0090568.1 MGP_BALBcJ_G0034132.1 mouse_genomes_project 8 112514408 112533734 + MGP_BALBcJ_P0090568 Nudt7 protein_coding protein_coding MGP_BALBcJ_T0090569.1 MGP_BALBcJ_G0034132.1 mouse_genomes_project 8 112514431 112533728 + MGP_BALBcJ_P0090569 Nudt7 protein_coding protein_coding MGP_BALBcJ_T0090570.1 MGP_BALBcJ_G0034132.1 mouse_genomes_project 8 112514432 112528940 + MGP_BALBcJ_P0090570 Nudt7 protein_coding protein_coding MGP_BALBcJ_T0089440.1 MGP_BALBcJ_G0033748.1 mouse_genomes_project 8 69785627 69790179 + MGP_BALBcJ_P0089440 Olfr374 protein_coding protein_coding MGP_BALBcJ_T0018455.1 MGP_BALBcJ_G0015664.1 mouse_genomes_project 8 108190716 108198937 + Gm16349 processed_transcript processed_transcript MGP_BALBcJ_T0088691.1 MGP_BALBcJ_G0033531.1 mouse_genomes_project 8 37949056 38032625 - MGP_BALBcJ_P0088691 Mtmr7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088692.1 MGP_BALBcJ_G0033531.1 mouse_genomes_project 8 37949062 38032612 - MGP_BALBcJ_P0088692 Mtmr7 protein_coding protein_coding MGP_BALBcJ_T0088693.1 MGP_BALBcJ_G0033531.1 mouse_genomes_project 8 37951840 37988736 - MGP_BALBcJ_P0088693 Mtmr7 protein_coding protein_coding MGP_BALBcJ_T0088694.1 MGP_BALBcJ_G0033531.1 mouse_genomes_project 8 37952647 38032628 - MGP_BALBcJ_P0088694 Mtmr7 protein_coding protein_coding MGP_BALBcJ_T0088695.1 MGP_BALBcJ_G0033531.1 mouse_genomes_project 8 37962769 38032595 - MGP_BALBcJ_P0088695 Mtmr7 protein_coding protein_coding MGP_BALBcJ_T0088696.1 MGP_BALBcJ_G0033531.1 mouse_genomes_project 8 38005097 38032633 - Mtmr7 protein_coding processed_transcript MGP_BALBcJ_T0088107.1 MGP_BALBcJ_G0033318.1 mouse_genomes_project 8 1673329 1674156 - MGP_BALBcJ_P0088107 protein_coding protein_coding MGP_BALBcJ_T0090616.1 MGP_BALBcJ_G0034150.1 mouse_genomes_project 8 116157094 116216040 + MGP_BALBcJ_P0090616 Hsd17b2 protein_coding protein_coding MGP_BALBcJ_T0010936.1 MGP_BALBcJ_G0009061.1 mouse_genomes_project 8 20464504 20464632 + Mir486 miRNA miRNA MGP_BALBcJ_T0089418.1 MGP_BALBcJ_G0033743.1 mouse_genomes_project 8 69557804 69596223 + MGP_BALBcJ_P0089418 Zfp709 protein_coding protein_coding MGP_BALBcJ_T0089419.1 MGP_BALBcJ_G0033743.1 mouse_genomes_project 8 69558152 69558519 + Zfp709 protein_coding processed_transcript MGP_BALBcJ_T0089252.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68160152 68167409 + MGP_BALBcJ_P0089252 Fkbp8 protein_coding protein_coding MGP_BALBcJ_T0089253.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68160175 68167407 + MGP_BALBcJ_P0089253 Fkbp8 protein_coding protein_coding MGP_BALBcJ_T0089254.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68160190 68164945 + Fkbp8 protein_coding retained_intron MGP_BALBcJ_T0089255.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68160274 68167408 + MGP_BALBcJ_P0089255 Fkbp8 protein_coding protein_coding MGP_BALBcJ_T0089256.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68160437 68163092 + Fkbp8 protein_coding retained_intron MGP_BALBcJ_T0089257.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68161244 68162055 + MGP_BALBcJ_P0089257 Fkbp8 protein_coding protein_coding MGP_BALBcJ_T0089258.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68163621 68166242 + Fkbp8 protein_coding retained_intron MGP_BALBcJ_T0089259.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68164231 68167037 + Fkbp8 protein_coding retained_intron MGP_BALBcJ_T0089260.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68164618 68167052 + Fkbp8 protein_coding retained_intron MGP_BALBcJ_T0089261.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68164675 68166948 + Fkbp8 protein_coding retained_intron MGP_BALBcJ_T0089262.1 MGP_BALBcJ_G0033690.1 mouse_genomes_project 8 68166187 68167138 + MGP_BALBcJ_P0089262 Fkbp8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090464.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129821 109136527 + MGP_BALBcJ_P0090464 Cog4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090465.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129822 109165299 + MGP_BALBcJ_P0090465 Cog4 protein_coding protein_coding MGP_BALBcJ_T0090466.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129831 109135144 + MGP_BALBcJ_P0090466 Cog4 protein_coding protein_coding MGP_BALBcJ_T0090467.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129836 109133072 + Cog4 protein_coding retained_intron MGP_BALBcJ_T0090468.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129848 109136591 + Cog4 protein_coding processed_transcript MGP_BALBcJ_T0090469.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129848 109136628 + MGP_BALBcJ_P0090469 Cog4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090470.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129848 109136582 + MGP_BALBcJ_P0090470 Cog4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090471.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109129851 109164932 + MGP_BALBcJ_P0090471 Cog4 protein_coding protein_coding MGP_BALBcJ_T0090472.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109132669 109165288 + MGP_BALBcJ_P0090472 Cog4 protein_coding protein_coding MGP_BALBcJ_T0090473.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109142469 109151521 + Cog4 protein_coding retained_intron MGP_BALBcJ_T0090474.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109142624 109164932 + MGP_BALBcJ_P0090474 Cog4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090475.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109145845 109149400 + Cog4 protein_coding retained_intron MGP_BALBcJ_T0090476.1 MGP_BALBcJ_G0034102.1 mouse_genomes_project 8 109164083 109164823 + Cog4 protein_coding retained_intron MGP_BALBcJ_T0088234.1 MGP_BALBcJ_G0033359.1 mouse_genomes_project 8 10428966 10468511 + MGP_BALBcJ_P0088234 Tfdp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0089515.1 MGP_BALBcJ_G0033778.1 mouse_genomes_project 8 75170282 75184667 - MGP_BALBcJ_P0089515 Tmem184c protein_coding protein_coding MGP_BALBcJ_T0089516.1 MGP_BALBcJ_G0033778.1 mouse_genomes_project 8 75177537 75184712 - MGP_BALBcJ_P0089516 Tmem184c protein_coding protein_coding MGP_BALBcJ_T0089517.1 MGP_BALBcJ_G0033778.1 mouse_genomes_project 8 75181034 75184682 - MGP_BALBcJ_P0089517 Tmem184c protein_coding protein_coding MGP_BALBcJ_T0098659.1 MGP_BALBcJ_G0036713.1 mouse_genomes_project 8 45250314 45250438 + n-R5s96 rRNA rRNA MGP_BALBcJ_T0009174.1 MGP_BALBcJ_G0007369.1 mouse_genomes_project 8 120070749 120075084 + 1700030M09Rik lincRNA lincRNA MGP_BALBcJ_T0009175.1 MGP_BALBcJ_G0007369.1 mouse_genomes_project 8 120070755 120074393 + 1700030M09Rik lincRNA lincRNA MGP_BALBcJ_T0090670.1 MGP_BALBcJ_G0034170.1 mouse_genomes_project 8 118476407 118537277 + MGP_BALBcJ_P0090670 Crispld2 protein_coding protein_coding MGP_BALBcJ_T0090671.1 MGP_BALBcJ_G0034170.1 mouse_genomes_project 8 118476477 118536067 + MGP_BALBcJ_P0090671 Crispld2 protein_coding protein_coding MGP_BALBcJ_T0090672.1 MGP_BALBcJ_G0034170.1 mouse_genomes_project 8 118487108 118536067 + MGP_BALBcJ_P0090672 Crispld2 protein_coding protein_coding MGP_BALBcJ_T0090673.1 MGP_BALBcJ_G0034170.1 mouse_genomes_project 8 118497680 118500164 + Crispld2 protein_coding processed_transcript MGP_BALBcJ_T0090674.1 MGP_BALBcJ_G0034170.1 mouse_genomes_project 8 118515265 118534962 + Crispld2 protein_coding retained_intron MGP_BALBcJ_T0090137.1 MGP_BALBcJ_G0033970.1 mouse_genomes_project 8 93636810 93662661 - MGP_BALBcJ_P0090137 Got2 protein_coding protein_coding MGP_BALBcJ_T0090138.1 MGP_BALBcJ_G0033970.1 mouse_genomes_project 8 93640389 93645976 - Got2 protein_coding processed_transcript MGP_BALBcJ_T0089554.1 MGP_BALBcJ_G0033791.1 mouse_genomes_project 8 77319421 77379143 + MGP_BALBcJ_P0089554 Anapc10 protein_coding unknown_likely_coding MGP_BALBcJ_T0015946.1 MGP_BALBcJ_G0014043.1 mouse_genomes_project 8 43468769 43469075 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009167.1 MGP_BALBcJ_G0007364.1 mouse_genomes_project 8 119568466 119596856 - Fendrr lincRNA lincRNA MGP_BALBcJ_T0009168.1 MGP_BALBcJ_G0007364.1 mouse_genomes_project 8 119572387 119573998 - Fendrr lincRNA lincRNA MGP_BALBcJ_T0009169.1 MGP_BALBcJ_G0007364.1 mouse_genomes_project 8 119572703 119596934 - Fendrr lincRNA lincRNA MGP_BALBcJ_T0002325.1 MGP_BALBcJ_G0002236.1 mouse_genomes_project 8 41745895 41746723 - TEC TEC MGP_BALBcJ_T0089666.1 MGP_BALBcJ_G0033832.1 mouse_genomes_project 8 81781614 81797618 - MGP_BALBcJ_P0089666 Cc2d1a protein_coding protein_coding MGP_BALBcJ_T0089667.1 MGP_BALBcJ_G0033832.1 mouse_genomes_project 8 81781614 81797689 - MGP_BALBcJ_P0089667 Cc2d1a protein_coding protein_coding MGP_BALBcJ_T0089668.1 MGP_BALBcJ_G0033832.1 mouse_genomes_project 8 81781623 81786137 - Cc2d1a protein_coding retained_intron MGP_BALBcJ_T0089669.1 MGP_BALBcJ_G0033832.1 mouse_genomes_project 8 81796207 81797650 - Cc2d1a protein_coding processed_transcript MGP_BALBcJ_T0089406.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69370572 69383379 - MGP_BALBcJ_P0089406 Fcho1 protein_coding protein_coding MGP_BALBcJ_T0089407.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69370579 69387786 - MGP_BALBcJ_P0089407 Fcho1 protein_coding protein_coding MGP_BALBcJ_T0089408.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69370605 69387736 - Fcho1 protein_coding retained_intron MGP_BALBcJ_T0089409.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69370838 69387736 - MGP_BALBcJ_P0089409 Fcho1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089410.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69371822 69373292 - Fcho1 protein_coding retained_intron MGP_BALBcJ_T0089411.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69371874 69374365 - Fcho1 protein_coding retained_intron MGP_BALBcJ_T0089412.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69374725 69377727 - MGP_BALBcJ_P0089412 Fcho1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089413.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69376533 69378779 - Fcho1 protein_coding retained_intron MGP_BALBcJ_T0089414.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69377940 69387774 - MGP_BALBcJ_P0089414 Fcho1 protein_coding protein_coding MGP_BALBcJ_T0089415.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69378035 69383937 - Fcho1 protein_coding processed_transcript MGP_BALBcJ_T0089416.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69378960 69387717 - Fcho1 protein_coding retained_intron MGP_BALBcJ_T0089417.1 MGP_BALBcJ_G0033742.1 mouse_genomes_project 8 69379358 69385419 - MGP_BALBcJ_P0089417 Fcho1 protein_coding protein_coding MGP_BALBcJ_T0090847.1 MGP_BALBcJ_G0034211.1 mouse_genomes_project 8 121306479 121351023 + MGP_BALBcJ_P0090847 Acsf3 protein_coding protein_coding MGP_BALBcJ_T0088798.1 MGP_BALBcJ_G0033562.1 mouse_genomes_project 8 43521793 43550251 + MGP_BALBcJ_P0088798 Lrp2bp protein_coding protein_coding MGP_BALBcJ_T0088799.1 MGP_BALBcJ_G0033562.1 mouse_genomes_project 8 43521798 43549982 + MGP_BALBcJ_P0088799 Lrp2bp protein_coding protein_coding MGP_BALBcJ_T0088800.1 MGP_BALBcJ_G0033562.1 mouse_genomes_project 8 43533620 43552073 + MGP_BALBcJ_P0088800 Lrp2bp protein_coding protein_coding MGP_BALBcJ_T0088801.1 MGP_BALBcJ_G0033562.1 mouse_genomes_project 8 43533629 43550239 + MGP_BALBcJ_P0088801 Lrp2bp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088802.1 MGP_BALBcJ_G0033562.1 mouse_genomes_project 8 43534768 43542796 + Lrp2bp protein_coding processed_transcript MGP_BALBcJ_T0088803.1 MGP_BALBcJ_G0033562.1 mouse_genomes_project 8 43544862 43552044 + Lrp2bp protein_coding processed_transcript MGP_BALBcJ_T0090259.1 MGP_BALBcJ_G0034019.1 mouse_genomes_project 8 103571230 103602712 + Lrrc36 protein_coding processed_transcript MGP_BALBcJ_T0090260.1 MGP_BALBcJ_G0034019.1 mouse_genomes_project 8 103571281 103584490 + Lrrc36 protein_coding processed_transcript MGP_BALBcJ_T0090261.1 MGP_BALBcJ_G0034019.1 mouse_genomes_project 8 103571281 103622946 + MGP_BALBcJ_P0090261 Lrrc36 protein_coding protein_coding MGP_BALBcJ_T0090262.1 MGP_BALBcJ_G0034019.1 mouse_genomes_project 8 103585226 103622944 + MGP_BALBcJ_P0090262 Lrrc36 protein_coding protein_coding MGP_BALBcJ_T0089129.1 MGP_BALBcJ_G0033662.1 mouse_genomes_project 8 67509707 67511042 + MGP_BALBcJ_P0089129 Tssk6 protein_coding protein_coding MGP_BALBcJ_T0005346.1 MGP_BALBcJ_G0004532.1 mouse_genomes_project 8 66610441 66630544 + Gm15716 antisense antisense MGP_BALBcJ_T0090613.1 MGP_BALBcJ_G0034149.1 mouse_genomes_project 8 116116037 116126181 - MGP_BALBcJ_P0090613 Sdr42e1 protein_coding protein_coding MGP_BALBcJ_T0090614.1 MGP_BALBcJ_G0034149.1 mouse_genomes_project 8 116116040 116128323 - MGP_BALBcJ_P0090614 Sdr42e1 protein_coding protein_coding MGP_BALBcJ_T0090615.1 MGP_BALBcJ_G0034149.1 mouse_genomes_project 8 116117971 116128323 - MGP_BALBcJ_P0090615 Sdr42e1 protein_coding protein_coding MGP_BALBcJ_T0089596.1 MGP_BALBcJ_G0033807.1 mouse_genomes_project 8 81024644 81062674 + MGP_BALBcJ_P0089596 Clgn protein_coding protein_coding MGP_BALBcJ_T0089597.1 MGP_BALBcJ_G0033807.1 mouse_genomes_project 8 81024655 81060953 + MGP_BALBcJ_P0089597 Clgn protein_coding protein_coding MGP_BALBcJ_T0088158.1 MGP_BALBcJ_G0033344.1 mouse_genomes_project 8 9635188 9653488 - MGP_BALBcJ_P0088158 protein_coding protein_coding MGP_BALBcJ_T0090463.1 MGP_BALBcJ_G0034101.1 mouse_genomes_project 8 109093289 109129601 - MGP_BALBcJ_P0090463 Sf3b3 protein_coding protein_coding MGP_BALBcJ_T0089520.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75780836 75788515 + MGP_BALBcJ_P0089520 Ttc29 protein_coding protein_coding MGP_BALBcJ_T0089521.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75780841 75788373 + MGP_BALBcJ_P0089521 Ttc29 protein_coding protein_coding MGP_BALBcJ_T0089522.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75780854 75785558 + Ttc29 protein_coding processed_transcript MGP_BALBcJ_T0089523.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75780881 75964193 + MGP_BALBcJ_P0089523 Ttc29 protein_coding protein_coding MGP_BALBcJ_T0089524.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75780889 75785502 + Ttc29 protein_coding processed_transcript MGP_BALBcJ_T0089525.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75786333 75963550 + MGP_BALBcJ_P0089525 Ttc29 protein_coding protein_coding MGP_BALBcJ_T0089526.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75818829 75844130 + Ttc29 protein_coding retained_intron MGP_BALBcJ_T0089527.1 MGP_BALBcJ_G0033780.1 mouse_genomes_project 8 75960844 75963641 + Ttc29 protein_coding processed_transcript MGP_BALBcJ_T0098725.1 MGP_BALBcJ_G0036779.1 mouse_genomes_project 8 66985051 66985347 + Gm25661 ribozyme ribozyme MGP_BALBcJ_T0015955.1 MGP_BALBcJ_G0014052.1 mouse_genomes_project 8 69628659 69630187 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010955.1 MGP_BALBcJ_G0009080.1 mouse_genomes_project 8 70338267 70338392 + Gm26237 miRNA miRNA MGP_BALBcJ_T0088440.1 MGP_BALBcJ_G0033447.1 mouse_genomes_project 8 21927734 21939409 - MGP_BALBcJ_P0088440 Ido1 protein_coding protein_coding MGP_BALBcJ_T0088441.1 MGP_BALBcJ_G0033447.1 mouse_genomes_project 8 21927734 21940752 - MGP_BALBcJ_P0088441 Ido1 protein_coding protein_coding MGP_BALBcJ_T0088113.1 MGP_BALBcJ_G0033323.1 mouse_genomes_project 8 5685719 5689006 + MGP_BALBcJ_P0088113 protein_coding protein_coding MGP_BALBcJ_T0088515.1 MGP_BALBcJ_G0033461.1 mouse_genomes_project 8 23074573 23104974 - MGP_BALBcJ_P0088515 Ddhd2 protein_coding protein_coding MGP_BALBcJ_T0088383.1 MGP_BALBcJ_G0033429.1 mouse_genomes_project 8 19794204 19880872 + MGP_BALBcJ_P0088383 Slc20a2 protein_coding protein_coding MGP_BALBcJ_T0090315.1 MGP_BALBcJ_G0034046.1 mouse_genomes_project 8 104167348 104174350 - MGP_BALBcJ_P0090315 Dpep2 protein_coding protein_coding MGP_BALBcJ_T0090316.1 MGP_BALBcJ_G0034046.1 mouse_genomes_project 8 104167349 104179397 - MGP_BALBcJ_P0090316 Dpep2 protein_coding protein_coding MGP_BALBcJ_T0090317.1 MGP_BALBcJ_G0034046.1 mouse_genomes_project 8 104167354 104174360 - MGP_BALBcJ_P0090317 Dpep2 protein_coding protein_coding MGP_BALBcJ_T0090318.1 MGP_BALBcJ_G0034046.1 mouse_genomes_project 8 104170151 104174323 - Dpep2 protein_coding retained_intron MGP_BALBcJ_T0090319.1 MGP_BALBcJ_G0034046.1 mouse_genomes_project 8 104170903 104174351 - Dpep2 protein_coding retained_intron MGP_BALBcJ_T0101381.1 MGP_BALBcJ_G0039417.1 mouse_genomes_project 8 22042768 22042892 + Gm26208 snoRNA snoRNA MGP_BALBcJ_T0089937.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88824951 88881132 + MGP_BALBcJ_P0089937 Rbl2 protein_coding protein_coding MGP_BALBcJ_T0089938.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88824988 88834861 + Rbl2 protein_coding retained_intron MGP_BALBcJ_T0089939.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88862890 88872245 + Rbl2 protein_coding retained_intron MGP_BALBcJ_T0089940.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88862927 88871191 + Rbl2 protein_coding processed_transcript MGP_BALBcJ_T0089942.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88869377 88872985 + Rbl2 protein_coding retained_intron MGP_BALBcJ_T0089943.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88870796 88872925 + Rbl2 protein_coding retained_intron MGP_BALBcJ_T0089944.1 MGP_BALBcJ_G0033904.1 mouse_genomes_project 8 88872269 88873247 + Rbl2 protein_coding retained_intron MGP_BALBcJ_T0089773.1 MGP_BALBcJ_G0033856.1 mouse_genomes_project 8 82585427 82611949 - MGP_BALBcJ_P0089773 Mast1 protein_coding protein_coding MGP_BALBcJ_T0089774.1 MGP_BALBcJ_G0033856.1 mouse_genomes_project 8 82585430 82597629 - Mast1 protein_coding retained_intron MGP_BALBcJ_T0089775.1 MGP_BALBcJ_G0033856.1 mouse_genomes_project 8 82585432 82611955 - MGP_BALBcJ_P0089775 Mast1 protein_coding protein_coding MGP_BALBcJ_T0089777.1 MGP_BALBcJ_G0033856.1 mouse_genomes_project 8 82594867 82599455 - Mast1 protein_coding retained_intron MGP_BALBcJ_T0089778.1 MGP_BALBcJ_G0033856.1 mouse_genomes_project 8 82597243 82602440 - Mast1 protein_coding retained_intron MGP_BALBcJ_T0089779.1 MGP_BALBcJ_G0033856.1 mouse_genomes_project 8 82609518 82611940 - Mast1 protein_coding retained_intron MGP_BALBcJ_T0090374.1 MGP_BALBcJ_G0034069.1 mouse_genomes_project 8 105284623 105288750 - MGP_BALBcJ_P0090374 Tmed6 protein_coding protein_coding MGP_BALBcJ_T0090069.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92608284 92624613 + MGP_BALBcJ_P0090069 Coq9 protein_coding protein_coding MGP_BALBcJ_T0090070.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92608368 92620500 + Coq9 protein_coding retained_intron MGP_BALBcJ_T0090071.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92608378 92612725 + Coq9 protein_coding retained_intron MGP_BALBcJ_T0090072.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92608392 92622913 + Coq9 protein_coding retained_intron MGP_BALBcJ_T0090073.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92608392 92622988 + MGP_BALBcJ_P0090073 Coq9 protein_coding protein_coding MGP_BALBcJ_T0090074.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92619906 92620700 + Coq9 protein_coding retained_intron MGP_BALBcJ_T0090075.1 MGP_BALBcJ_G0033946.1 mouse_genomes_project 8 92623232 92624055 + Coq9 protein_coding retained_intron MGP_BALBcJ_T0089931.1 MGP_BALBcJ_G0033901.1 mouse_genomes_project 8 87974969 88075703 - MGP_BALBcJ_P0089931 Tox3 protein_coding protein_coding MGP_BALBcJ_T0089932.1 MGP_BALBcJ_G0033901.1 mouse_genomes_project 8 87980646 88075491 - MGP_BALBcJ_P0089932 Tox3 protein_coding protein_coding MGP_BALBcJ_T0089933.1 MGP_BALBcJ_G0033901.1 mouse_genomes_project 8 87985896 88075486 - MGP_BALBcJ_P0089933 Tox3 protein_coding protein_coding MGP_BALBcJ_T0088077.1 MGP_BALBcJ_G0033312.1 mouse_genomes_project 8 1245423 1247050 - MGP_BALBcJ_P0088077 Ctxn1 protein_coding protein_coding MGP_BALBcJ_T0088298.1 MGP_BALBcJ_G0033382.1 mouse_genomes_project 8 12126412 12201029 + MGP_BALBcJ_P0088298 Myom2 protein_coding protein_coding MGP_BALBcJ_T0088299.1 MGP_BALBcJ_G0033382.1 mouse_genomes_project 8 12127567 12132532 + Myom2 protein_coding processed_transcript MGP_BALBcJ_T0088300.1 MGP_BALBcJ_G0033382.1 mouse_genomes_project 8 12128782 12142524 + Myom2 protein_coding retained_intron MGP_BALBcJ_T0088301.1 MGP_BALBcJ_G0033382.1 mouse_genomes_project 8 12172836 12176080 + Myom2 protein_coding retained_intron MGP_BALBcJ_T0088302.1 MGP_BALBcJ_G0033382.1 mouse_genomes_project 8 12186529 12198649 + Myom2 protein_coding processed_transcript MGP_BALBcJ_T0088040.1 MGP_BALBcJ_G0033304.1 mouse_genomes_project 8 893852 903018 - MGP_BALBcJ_P0088040 Cd209b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088041.1 MGP_BALBcJ_G0033304.1 mouse_genomes_project 8 893854 903007 - MGP_BALBcJ_P0088041 Cd209b protein_coding protein_coding MGP_BALBcJ_T0088042.1 MGP_BALBcJ_G0033304.1 mouse_genomes_project 8 894803 903007 - MGP_BALBcJ_P0088042 Cd209b protein_coding protein_coding MGP_BALBcJ_T0088043.1 MGP_BALBcJ_G0033304.1 mouse_genomes_project 8 894874 902987 - MGP_BALBcJ_P0088043 Cd209b protein_coding protein_coding MGP_BALBcJ_T0009125.1 MGP_BALBcJ_G0007335.1 mouse_genomes_project 8 85206948 85208131 - 1700120C18Rik lincRNA lincRNA MGP_BALBcJ_T0009082.1 MGP_BALBcJ_G0007302.1 mouse_genomes_project 8 54326226 54327563 + lincRNA lincRNA MGP_BALBcJ_T0090150.1 MGP_BALBcJ_G0033975.1 mouse_genomes_project 8 102285627 102338051 + MGP_BALBcJ_P0090150 Bean1 protein_coding protein_coding MGP_BALBcJ_T0090151.1 MGP_BALBcJ_G0033975.1 mouse_genomes_project 8 102285627 102338051 + MGP_BALBcJ_P0090151 Bean1 protein_coding protein_coding MGP_BALBcJ_T0090152.1 MGP_BALBcJ_G0033975.1 mouse_genomes_project 8 102285627 102338051 + MGP_BALBcJ_P0090152 Bean1 protein_coding protein_coding MGP_BALBcJ_T0090153.1 MGP_BALBcJ_G0033975.1 mouse_genomes_project 8 102285627 102338051 + MGP_BALBcJ_P0090153 Bean1 protein_coding protein_coding MGP_BALBcJ_T0090633.1 MGP_BALBcJ_G0034156.1 mouse_genomes_project 8 117920070 117946294 + MGP_BALBcJ_P0090633 Necab2 protein_coding protein_coding MGP_BALBcJ_T0090634.1 MGP_BALBcJ_G0034156.1 mouse_genomes_project 8 117920112 117946065 + Necab2 protein_coding processed_transcript MGP_BALBcJ_T0090635.1 MGP_BALBcJ_G0034156.1 mouse_genomes_project 8 117926087 117944599 + MGP_BALBcJ_P0090635 Necab2 protein_coding protein_coding MGP_BALBcJ_T0090449.1 MGP_BALBcJ_G0034097.1 mouse_genomes_project 8 108541001 108890067 + MGP_BALBcJ_P0090449 Hydin protein_coding protein_coding MGP_BALBcJ_T0090450.1 MGP_BALBcJ_G0034097.1 mouse_genomes_project 8 108541007 108889871 + MGP_BALBcJ_P0090450 Hydin protein_coding unknown_likely_coding MGP_BALBcJ_T0088159.1 MGP_BALBcJ_G0033345.1 mouse_genomes_project 8 9653216 9681334 + MGP_BALBcJ_P0088159 Spaca7 protein_coding protein_coding MGP_BALBcJ_T0088356.1 MGP_BALBcJ_G0033416.1 mouse_genomes_project 8 19274130 19279737 + MGP_BALBcJ_P0088356 Fam90a1a protein_coding protein_coding MGP_BALBcJ_T0088032.1 MGP_BALBcJ_G0033298.1 mouse_genomes_project 8 618382 623333 + MGP_BALBcJ_P0088032 Trappc5 protein_coding protein_coding MGP_BALBcJ_T0098654.1 MGP_BALBcJ_G0036708.1 mouse_genomes_project 8 2322989 2323108 - n-R5s94 rRNA rRNA MGP_BALBcJ_T0089170.1 MGP_BALBcJ_G0033674.1 mouse_genomes_project 8 67800900 67829113 - Slc25a42 protein_coding retained_intron MGP_BALBcJ_T0089171.1 MGP_BALBcJ_G0033674.1 mouse_genomes_project 8 67800900 67829113 - MGP_BALBcJ_P0089171 Slc25a42 protein_coding protein_coding MGP_BALBcJ_T0089172.1 MGP_BALBcJ_G0033674.1 mouse_genomes_project 8 67800900 67829064 - MGP_BALBcJ_P0089172 Slc25a42 protein_coding protein_coding MGP_BALBcJ_T0089173.1 MGP_BALBcJ_G0033674.1 mouse_genomes_project 8 67804188 67829113 - Slc25a42 protein_coding retained_intron MGP_BALBcJ_T0089174.1 MGP_BALBcJ_G0033674.1 mouse_genomes_project 8 67808868 67829113 - Slc25a42 protein_coding retained_intron MGP_BALBcJ_T0088845.1 MGP_BALBcJ_G0033574.1 mouse_genomes_project 8 44936710 44938941 + MGP_BALBcJ_P0088845 protein_coding protein_coding MGP_BALBcJ_T0089301.1 MGP_BALBcJ_G0033713.1 mouse_genomes_project 8 68534516 68537215 - MGP_BALBcJ_P0089301 Rpl18a protein_coding protein_coding MGP_BALBcJ_T0089302.1 MGP_BALBcJ_G0033713.1 mouse_genomes_project 8 68535269 68537148 - MGP_BALBcJ_P0089302 Rpl18a protein_coding unknown_likely_coding MGP_BALBcJ_T0098665.1 MGP_BALBcJ_G0036719.1 mouse_genomes_project 8 113443929 113444029 - Gm22556 rRNA rRNA MGP_BALBcJ_T0090040.1 MGP_BALBcJ_G0033937.1 mouse_genomes_project 8 92310823 92348425 + MGP_BALBcJ_P0090040 Cpne2 protein_coding protein_coding MGP_BALBcJ_T0090041.1 MGP_BALBcJ_G0033937.1 mouse_genomes_project 8 92310872 92326724 + Cpne2 protein_coding retained_intron MGP_BALBcJ_T0090042.1 MGP_BALBcJ_G0033937.1 mouse_genomes_project 8 92310900 92327719 + Cpne2 protein_coding processed_transcript MGP_BALBcJ_T0090043.1 MGP_BALBcJ_G0033937.1 mouse_genomes_project 8 92310900 92348286 + MGP_BALBcJ_P0090043 Cpne2 protein_coding protein_coding MGP_BALBcJ_T0090044.1 MGP_BALBcJ_G0033937.1 mouse_genomes_project 8 92340541 92348010 + Cpne2 protein_coding retained_intron MGP_BALBcJ_T0010968.1 MGP_BALBcJ_G0009093.1 mouse_genomes_project 8 81858833 81858916 - Mir3074-2 miRNA miRNA MGP_BALBcJ_T0009165.1 MGP_BALBcJ_G0007362.1 mouse_genomes_project 8 119389936 119392212 + Gm26878 lincRNA lincRNA MGP_BALBcJ_T0089463.1 MGP_BALBcJ_G0033760.1 mouse_genomes_project 8 70160437 70172433 - MGP_BALBcJ_P0089463 Slc35e1 protein_coding protein_coding MGP_BALBcJ_T0089464.1 MGP_BALBcJ_G0033760.1 mouse_genomes_project 8 70164415 70172036 - MGP_BALBcJ_P0089464 Slc35e1 protein_coding protein_coding MGP_BALBcJ_T0089286.1 MGP_BALBcJ_G0033705.1 mouse_genomes_project 8 68408675 68417306 - MGP_BALBcJ_P0089286 Pik3r2 protein_coding protein_coding MGP_BALBcJ_T0089287.1 MGP_BALBcJ_G0033705.1 mouse_genomes_project 8 68408960 68409888 - MGP_BALBcJ_P0089287 Pik3r2 protein_coding protein_coding MGP_BALBcJ_T0089288.1 MGP_BALBcJ_G0033705.1 mouse_genomes_project 8 68409139 68410164 - Pik3r2 protein_coding retained_intron MGP_BALBcJ_T0089289.1 MGP_BALBcJ_G0033705.1 mouse_genomes_project 8 68412492 68413743 - Pik3r2 protein_coding retained_intron MGP_BALBcJ_T0089290.1 MGP_BALBcJ_G0033705.1 mouse_genomes_project 8 68412872 68415280 - MGP_BALBcJ_P0089290 Pik3r2 protein_coding protein_coding MGP_BALBcJ_T0089291.1 MGP_BALBcJ_G0033705.1 mouse_genomes_project 8 68415601 68417272 - Pik3r2 protein_coding processed_transcript MGP_BALBcJ_T0011000.1 MGP_BALBcJ_G0009125.1 mouse_genomes_project 8 115999862 115999917 - Gm27361 miRNA miRNA MGP_BALBcJ_T0089558.1 MGP_BALBcJ_G0033794.1 mouse_genomes_project 8 78209241 78290147 + MGP_BALBcJ_P0089558 Frem3 protein_coding protein_coding MGP_BALBcJ_T0089803.1 MGP_BALBcJ_G0033864.1 mouse_genomes_project 8 82710992 82714431 + MGP_BALBcJ_P0089803 2310036O22Rik protein_coding protein_coding MGP_BALBcJ_T0089853.1 MGP_BALBcJ_G0033879.1 mouse_genomes_project 8 83206218 83223906 - MGP_BALBcJ_P0089853 Dnaja2 protein_coding protein_coding MGP_BALBcJ_T0009145.1 MGP_BALBcJ_G0007347.1 mouse_genomes_project 8 92203254 92214504 - 9330175E14Rik lincRNA lincRNA MGP_BALBcJ_T0009146.1 MGP_BALBcJ_G0007347.1 mouse_genomes_project 8 92210170 92214629 - 9330175E14Rik lincRNA lincRNA MGP_BALBcJ_T0009147.1 MGP_BALBcJ_G0007347.1 mouse_genomes_project 8 92213473 92215459 - 9330175E14Rik lincRNA lincRNA MGP_BALBcJ_T0005353.1 MGP_BALBcJ_G0004538.1 mouse_genomes_project 8 89386113 89394375 - Gm3235 antisense antisense MGP_BALBcJ_T0100132.1 MGP_BALBcJ_G0038168.1 mouse_genomes_project 8 69724897 69725055 + Gm25052 snRNA snRNA MGP_BALBcJ_T0089511.1 MGP_BALBcJ_G0033777.1 mouse_genomes_project 8 75125086 75157087 + MGP_BALBcJ_P0089511 Prmt9 protein_coding protein_coding MGP_BALBcJ_T0089512.1 MGP_BALBcJ_G0033777.1 mouse_genomes_project 8 75125096 75139316 + Prmt9 protein_coding retained_intron MGP_BALBcJ_T0089513.1 MGP_BALBcJ_G0033777.1 mouse_genomes_project 8 75125099 75157087 + MGP_BALBcJ_P0089513 Prmt9 protein_coding protein_coding MGP_BALBcJ_T0089514.1 MGP_BALBcJ_G0033777.1 mouse_genomes_project 8 75138999 75140431 + Prmt9 protein_coding retained_intron MGP_BALBcJ_T0010961.1 MGP_BALBcJ_G0009086.1 mouse_genomes_project 8 81657830 81657949 - Mir1199 miRNA miRNA MGP_BALBcJ_T0090697.1 MGP_BALBcJ_G0034175.1 mouse_genomes_project 8 119076294 119086992 - Gins2 protein_coding retained_intron MGP_BALBcJ_T0090698.1 MGP_BALBcJ_G0034175.1 mouse_genomes_project 8 119076294 119087316 - MGP_BALBcJ_P0090698 Gins2 protein_coding protein_coding MGP_BALBcJ_T0090699.1 MGP_BALBcJ_G0034175.1 mouse_genomes_project 8 119079205 119084220 - Gins2 protein_coding retained_intron MGP_BALBcJ_T0090700.1 MGP_BALBcJ_G0034175.1 mouse_genomes_project 8 119079816 119087046 - Gins2 protein_coding processed_transcript MGP_BALBcJ_T0090808.1 MGP_BALBcJ_G0034198.1 mouse_genomes_project 8 120950212 120958378 - MGP_BALBcJ_P0090808 Cyba protein_coding protein_coding MGP_BALBcJ_T0098406.1 MGP_BALBcJ_G0036460.1 mouse_genomes_project 8 120969765 120971754 + pseudogene pseudogene MGP_BALBcJ_T0090503.1 MGP_BALBcJ_G0034109.1 mouse_genomes_project 8 109385876 109430703 + MGP_BALBcJ_P0090503 Pdpr protein_coding protein_coding MGP_BALBcJ_T0090504.1 MGP_BALBcJ_G0034109.1 mouse_genomes_project 8 109385890 109428776 + MGP_BALBcJ_P0090504 Pdpr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089662.1 MGP_BALBcJ_G0033830.1 mouse_genomes_project 8 81747828 81755245 - MGP_BALBcJ_P0089662 Dcaf15 protein_coding protein_coding MGP_BALBcJ_T0089663.1 MGP_BALBcJ_G0033830.1 mouse_genomes_project 8 81748206 81755220 - MGP_BALBcJ_P0089663 Dcaf15 protein_coding unknown_likely_coding MGP_BALBcJ_T0089448.1 MGP_BALBcJ_G0033752.1 mouse_genomes_project 8 69881819 69890434 - MGP_BALBcJ_P0089448 Cib3 protein_coding protein_coding MGP_BALBcJ_T0088329.1 MGP_BALBcJ_G0033392.1 mouse_genomes_project 8 16145980 16149414 - MGP_BALBcJ_P0088329 Defb12 protein_coding protein_coding MGP_BALBcJ_T0091034.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676260 126230948 + MGP_BALBcJ_P0091034 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091035.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676423 126051888 + MGP_BALBcJ_P0091035 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091036.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676423 126231263 + MGP_BALBcJ_P0091036 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091037.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676437 126021593 + MGP_BALBcJ_P0091037 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091038.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676465 126031209 + Pard3 protein_coding retained_intron MGP_BALBcJ_T0091039.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676612 126230948 + MGP_BALBcJ_P0091039 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091040.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676626 125989323 + MGP_BALBcJ_P0091040 Pard3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091041.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676626 125895927 + MGP_BALBcJ_P0091041 Pard3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091042.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676662 126229785 + MGP_BALBcJ_P0091042 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091043.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676662 126229785 + MGP_BALBcJ_P0091043 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091044.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676712 126045761 + MGP_BALBcJ_P0091044 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091045.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676712 126230948 + MGP_BALBcJ_P0091045 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091046.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676712 126045761 + MGP_BALBcJ_P0091046 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091047.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676712 126045761 + MGP_BALBcJ_P0091047 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091048.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676712 126093267 + MGP_BALBcJ_P0091048 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091049.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125676714 126045692 + MGP_BALBcJ_P0091049 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091050.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125685533 126045692 + MGP_BALBcJ_P0091050 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091051.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125918759 126021593 + MGP_BALBcJ_P0091051 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091052.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125918786 126052207 + MGP_BALBcJ_P0091052 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091053.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125925485 126021080 + MGP_BALBcJ_P0091053 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091054.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125975503 125980880 + Pard3 protein_coding retained_intron MGP_BALBcJ_T0091055.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125976399 126017656 + MGP_BALBcJ_P0091055 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091056.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 125990440 125995919 + Pard3 protein_coding retained_intron MGP_BALBcJ_T0091057.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 126008269 126019701 + MGP_BALBcJ_P0091057 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091058.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 126024441 126052204 + MGP_BALBcJ_P0091058 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091059.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 126029657 126093158 + Pard3 protein_coding retained_intron MGP_BALBcJ_T0091060.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 126066778 126093174 + MGP_BALBcJ_P0091060 Pard3 protein_coding protein_coding MGP_BALBcJ_T0091061.1 MGP_BALBcJ_G0034271.1 mouse_genomes_project 8 126198806 126229828 + Pard3 protein_coding processed_transcript MGP_BALBcJ_T0088879.1 MGP_BALBcJ_G0033586.1 mouse_genomes_project 8 46926492 46932821 + protein_coding processed_transcript MGP_BALBcJ_T0088880.1 MGP_BALBcJ_G0033586.1 mouse_genomes_project 8 46926519 47060147 + MGP_BALBcJ_P0088880 protein_coding protein_coding MGP_BALBcJ_T0088881.1 MGP_BALBcJ_G0033586.1 mouse_genomes_project 8 47019807 47060054 + MGP_BALBcJ_P0088881 protein_coding protein_coding MGP_BALBcJ_T0088882.1 MGP_BALBcJ_G0033586.1 mouse_genomes_project 8 47042362 47079596 + protein_coding processed_transcript MGP_BALBcJ_T0088326.1 MGP_BALBcJ_G0033389.1 mouse_genomes_project 8 16014633 16019450 - MGP_BALBcJ_P0088326 Defb37 protein_coding protein_coding MGP_BALBcJ_T0088087.1 MGP_BALBcJ_G0033314.1 mouse_genomes_project 8 1272874 1314356 - MGP_BALBcJ_P0088087 Elavl1 protein_coding protein_coding MGP_BALBcJ_T0088014.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 572892 585768 + MGP_BALBcJ_P0088014 Stxbp2 protein_coding protein_coding MGP_BALBcJ_T0088015.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 573089 577449 + Stxbp2 protein_coding processed_transcript MGP_BALBcJ_T0088016.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 573090 575862 + Stxbp2 protein_coding processed_transcript MGP_BALBcJ_T0088017.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 573090 577594 + Stxbp2 protein_coding processed_transcript MGP_BALBcJ_T0088018.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 573094 576673 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088019.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 573102 577697 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088020.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 573107 584919 + MGP_BALBcJ_P0088020 Stxbp2 protein_coding protein_coding MGP_BALBcJ_T0088021.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 574852 576004 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088022.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 577370 577674 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088023.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 579120 583126 + Stxbp2 protein_coding processed_transcript MGP_BALBcJ_T0088024.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 581528 584918 + Stxbp2 protein_coding processed_transcript MGP_BALBcJ_T0088025.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 582828 584059 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088026.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 582885 584144 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088027.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 582958 584912 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0088028.1 MGP_BALBcJ_G0033295.1 mouse_genomes_project 8 583733 584919 + Stxbp2 protein_coding retained_intron MGP_BALBcJ_T0015941.1 MGP_BALBcJ_G0014038.1 mouse_genomes_project 8 35236936 35237952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100134.1 MGP_BALBcJ_G0038170.1 mouse_genomes_project 8 74764294 74764466 + Gm23260 snRNA snRNA MGP_BALBcJ_T0011698.1 MGP_BALBcJ_G0009823.1 mouse_genomes_project 8 29043863 29043964 - Gm24184 misc_RNA misc_RNA MGP_BALBcJ_T0018409.1 MGP_BALBcJ_G0015645.1 mouse_genomes_project 8 9753072 9754375 + 4931415C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0018410.1 MGP_BALBcJ_G0015645.1 mouse_genomes_project 8 9753313 9760115 + 4931415C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0089145.1 MGP_BALBcJ_G0033670.1 mouse_genomes_project 8 67747688 67750100 + MGP_BALBcJ_P0089145 Nr2c2ap protein_coding protein_coding MGP_BALBcJ_T0090028.1 MGP_BALBcJ_G0033934.1 mouse_genomes_project 8 92107290 92144316 + MGP_BALBcJ_P0090028 Slc12a3 protein_coding protein_coding MGP_BALBcJ_T0010960.1 MGP_BALBcJ_G0009085.1 mouse_genomes_project 8 81651777 81651914 + Mir8111 miRNA miRNA MGP_BALBcJ_T0090327.1 MGP_BALBcJ_G0034049.1 mouse_genomes_project 8 104244680 104320024 + MGP_BALBcJ_P0090327 Nfatc3 protein_coding protein_coding MGP_BALBcJ_T0090328.1 MGP_BALBcJ_G0034049.1 mouse_genomes_project 8 104244968 104320027 + MGP_BALBcJ_P0090328 Nfatc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0100135.1 MGP_BALBcJ_G0038171.1 mouse_genomes_project 8 75145034 75145142 - Gm23468 snRNA snRNA MGP_BALBcJ_T0089838.1 MGP_BALBcJ_G0033873.1 mouse_genomes_project 8 82904809 82905748 + MGP_BALBcJ_P0089838 Olfr371 protein_coding protein_coding MGP_BALBcJ_T0010977.1 MGP_BALBcJ_G0009102.1 mouse_genomes_project 8 90673166 90673224 - Gm22151 miRNA miRNA MGP_BALBcJ_T0005350.1 MGP_BALBcJ_G0004535.1 mouse_genomes_project 8 78110935 78113567 - 4930505O20Rik antisense antisense MGP_BALBcJ_T0010947.1 MGP_BALBcJ_G0009072.1 mouse_genomes_project 8 62664948 62665032 - Gm23419 miRNA miRNA MGP_BALBcJ_T0101382.1 MGP_BALBcJ_G0039418.1 mouse_genomes_project 8 22958779 22958910 - Gm23184 snoRNA snoRNA MGP_BALBcJ_T0009170.1 MGP_BALBcJ_G0007365.1 mouse_genomes_project 8 119714593 119717715 - 5033426O07Rik lincRNA lincRNA MGP_BALBcJ_T0098395.1 MGP_BALBcJ_G0036449.1 mouse_genomes_project 8 6906228 6906578 - pseudogene pseudogene MGP_BALBcJ_T0091028.1 MGP_BALBcJ_G0034266.1 mouse_genomes_project 8 124997117 125000047 + MGP_BALBcJ_P0091028 Coa6 protein_coding protein_coding MGP_BALBcJ_T0010984.1 MGP_BALBcJ_G0009109.1 mouse_genomes_project 8 103462550 103462659 - Gm27320 miRNA miRNA MGP_BALBcJ_T0102840.1 MGP_BALBcJ_G0040655.1 mouse_genomes_project 8 19068159 19068986 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101394.1 MGP_BALBcJ_G0039430.1 mouse_genomes_project 8 50616109 50616225 + Gm23666 snoRNA snoRNA MGP_BALBcJ_T0015985.1 MGP_BALBcJ_G0014082.1 mouse_genomes_project 8 119232943 119233624 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101383.1 MGP_BALBcJ_G0039419.1 mouse_genomes_project 8 22980483 22980613 + Gm24992 snoRNA snoRNA MGP_BALBcJ_T0090571.1 MGP_BALBcJ_G0034133.1 mouse_genomes_project 8 112589260 112614605 + Vat1l protein_coding processed_transcript MGP_BALBcJ_T0090572.1 MGP_BALBcJ_G0034133.1 mouse_genomes_project 8 112589278 112755631 + MGP_BALBcJ_P0090572 Vat1l protein_coding protein_coding MGP_BALBcJ_T0090573.1 MGP_BALBcJ_G0034133.1 mouse_genomes_project 8 112589282 112614599 + MGP_BALBcJ_P0090573 Vat1l protein_coding protein_coding MGP_BALBcJ_T0090574.1 MGP_BALBcJ_G0034133.1 mouse_genomes_project 8 112749675 112755630 + Vat1l protein_coding retained_intron MGP_BALBcJ_T0005376.1 MGP_BALBcJ_G0004558.1 mouse_genomes_project 8 120068489 120069849 + Gm27045 antisense antisense MGP_BALBcJ_T0009045.1 MGP_BALBcJ_G0007273.1 mouse_genomes_project 8 7983394 7987425 - 3930402G23Rik lincRNA lincRNA MGP_BALBcJ_T0089784.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82636464 82645454 - MGP_BALBcJ_P0089784 Rnaseh2a protein_coding protein_coding MGP_BALBcJ_T0089785.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82636473 82645532 - MGP_BALBcJ_P0089785 Rnaseh2a protein_coding protein_coding MGP_BALBcJ_T0089786.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82636484 82636922 - Rnaseh2a protein_coding retained_intron MGP_BALBcJ_T0089787.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82636779 82645429 - Rnaseh2a protein_coding retained_intron MGP_BALBcJ_T0089788.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82645074 82649203 - MGP_BALBcJ_P0089788 Rnaseh2a protein_coding protein_coding MGP_BALBcJ_T0089789.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82645419 82646345 - MGP_BALBcJ_P0089789 Rnaseh2a protein_coding protein_coding MGP_BALBcJ_T0089790.1 MGP_BALBcJ_G0033858.1 mouse_genomes_project 8 82645696 82649018 - Rnaseh2a protein_coding processed_transcript MGP_BALBcJ_T0015978.1 MGP_BALBcJ_G0014075.1 mouse_genomes_project 8 95212203 95213603 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090987.1 MGP_BALBcJ_G0034251.1 mouse_genomes_project 8 123358850 123400651 + MGP_BALBcJ_P0090987 Trim67 protein_coding protein_coding MGP_BALBcJ_T0090988.1 MGP_BALBcJ_G0034251.1 mouse_genomes_project 8 123358923 123400662 + MGP_BALBcJ_P0090988 Trim67 protein_coding protein_coding MGP_BALBcJ_T0090596.1 MGP_BALBcJ_G0034140.1 mouse_genomes_project 8 115357690 115377453 + MGP_BALBcJ_P0090596 Cenpn protein_coding protein_coding MGP_BALBcJ_T0018405.1 MGP_BALBcJ_G0015643.1 mouse_genomes_project 8 1149218 1195203 - 4932443L11Rik processed_transcript processed_transcript MGP_BALBcJ_T0018406.1 MGP_BALBcJ_G0015643.1 mouse_genomes_project 8 1164826 1194608 - 4932443L11Rik processed_transcript processed_transcript MGP_BALBcJ_T0100129.1 MGP_BALBcJ_G0038165.1 mouse_genomes_project 8 63207201 63207308 - Gm23515 snRNA snRNA MGP_BALBcJ_T0089072.1 MGP_BALBcJ_G0033643.1 mouse_genomes_project 8 66660614 66686224 + MGP_BALBcJ_P0089072 Atp6v1b2 protein_coding protein_coding MGP_BALBcJ_T0089073.1 MGP_BALBcJ_G0033643.1 mouse_genomes_project 8 66660736 66679876 + Atp6v1b2 protein_coding retained_intron MGP_BALBcJ_T0089074.1 MGP_BALBcJ_G0033643.1 mouse_genomes_project 8 66660755 66674700 + Atp6v1b2 protein_coding retained_intron MGP_BALBcJ_T0089075.1 MGP_BALBcJ_G0033643.1 mouse_genomes_project 8 66660757 66668905 + Atp6v1b2 protein_coding retained_intron MGP_BALBcJ_T0089076.1 MGP_BALBcJ_G0033643.1 mouse_genomes_project 8 66674663 66675512 + Atp6v1b2 protein_coding retained_intron MGP_BALBcJ_T0089077.1 MGP_BALBcJ_G0033643.1 mouse_genomes_project 8 66675576 66680852 + Atp6v1b2 protein_coding retained_intron MGP_BALBcJ_T0089465.1 MGP_BALBcJ_G0033761.1 mouse_genomes_project 8 70174332 70227622 - MGP_BALBcJ_P0089465 Med26 protein_coding protein_coding MGP_BALBcJ_T0089543.1 MGP_BALBcJ_G0033787.1 mouse_genomes_project 8 76857201 76873919 - MGP_BALBcJ_P0089543 Mmaa protein_coding unknown_likely_coding MGP_BALBcJ_T0005328.1 MGP_BALBcJ_G0004516.1 mouse_genomes_project 8 38471684 38477466 + antisense antisense MGP_BALBcJ_T0088997.1 MGP_BALBcJ_G0033619.1 mouse_genomes_project 8 61575158 61775949 - MGP_BALBcJ_P0088997 Tll1 protein_coding protein_coding MGP_BALBcJ_T0015925.1 MGP_BALBcJ_G0014022.1 mouse_genomes_project 8 16601807 16602327 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009153.1 MGP_BALBcJ_G0007352.1 mouse_genomes_project 8 104475413 104492219 + Gm10629 lincRNA lincRNA MGP_BALBcJ_T0101379.1 MGP_BALBcJ_G0039415.1 mouse_genomes_project 8 18884718 18884810 - snoRNA snoRNA MGP_BALBcJ_T0088152.1 MGP_BALBcJ_G0033341.1 mouse_genomes_project 8 8908066 8923952 + MGP_BALBcJ_P0088152 Tex29 protein_coding protein_coding MGP_BALBcJ_T0088153.1 MGP_BALBcJ_G0033341.1 mouse_genomes_project 8 8908203 8911698 + Tex29 protein_coding processed_transcript MGP_BALBcJ_T0088154.1 MGP_BALBcJ_G0033341.1 mouse_genomes_project 8 8908511 8923896 + MGP_BALBcJ_P0088154 Tex29 protein_coding protein_coding MGP_BALBcJ_T0088155.1 MGP_BALBcJ_G0033341.1 mouse_genomes_project 8 8909653 8923948 + Tex29 protein_coding processed_transcript MGP_BALBcJ_T0090477.1 MGP_BALBcJ_G0034103.1 mouse_genomes_project 8 109165529 109185389 - MGP_BALBcJ_P0090477 Fuk protein_coding protein_coding MGP_BALBcJ_T0090880.1 MGP_BALBcJ_G0034218.1 mouse_genomes_project 8 121714475 121756331 + MGP_BALBcJ_P0090880 Dpep1 protein_coding protein_coding MGP_BALBcJ_T0101401.1 MGP_BALBcJ_G0039437.1 mouse_genomes_project 8 63436669 63436804 + Gm26123 snoRNA snoRNA MGP_BALBcJ_T0088406.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20292873 20471883 + MGP_BALBcJ_P0088406 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088407.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20292911 20472444 + MGP_BALBcJ_P0088407 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088408.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20293392 20470257 + MGP_BALBcJ_P0088408 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088409.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20353729 20470740 + MGP_BALBcJ_P0088409 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088410.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20353758 20471231 + MGP_BALBcJ_P0088410 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088411.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20353861 20471231 + MGP_BALBcJ_P0088411 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088412.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20377129 20472447 + MGP_BALBcJ_P0088412 Ank1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088413.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20377145 20472447 + MGP_BALBcJ_P0088413 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088414.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20377181 20472447 + MGP_BALBcJ_P0088414 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088415.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20377395 20471638 + MGP_BALBcJ_P0088415 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088416.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20377395 20471638 + MGP_BALBcJ_P0088416 Ank1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088417.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20414258 20445232 + MGP_BALBcJ_P0088417 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088418.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20442530 20448678 + Ank1 protein_coding retained_intron MGP_BALBcJ_T0088419.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20460663 20471229 + MGP_BALBcJ_P0088419 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088420.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20460738 20470644 + MGP_BALBcJ_P0088420 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088421.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20460910 20470255 + MGP_BALBcJ_P0088421 Ank1 protein_coding protein_coding MGP_BALBcJ_T0088422.1 MGP_BALBcJ_G0033437.1 mouse_genomes_project 8 20461726 20470319 + Ank1 protein_coding retained_intron MGP_BALBcJ_T0090761.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120325354 120354089 - MGP_BALBcJ_P0090761 Klhdc4 protein_coding protein_coding MGP_BALBcJ_T0090762.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120325374 120354060 - Klhdc4 protein_coding retained_intron MGP_BALBcJ_T0090763.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120325385 120326469 - Klhdc4 protein_coding retained_intron MGP_BALBcJ_T0090764.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120325588 120354000 - MGP_BALBcJ_P0090764 Klhdc4 protein_coding protein_coding MGP_BALBcJ_T0090765.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120325588 120354000 - MGP_BALBcJ_P0090765 Klhdc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090766.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120325588 120354000 - MGP_BALBcJ_P0090766 Klhdc4 protein_coding protein_coding MGP_BALBcJ_T0090767.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120327213 120334067 - Klhdc4 protein_coding processed_transcript MGP_BALBcJ_T0090768.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120328516 120330642 - Klhdc4 protein_coding retained_intron MGP_BALBcJ_T0090769.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120349540 120354029 - Klhdc4 protein_coding retained_intron MGP_BALBcJ_T0090770.1 MGP_BALBcJ_G0034190.1 mouse_genomes_project 8 120349834 120354024 - MGP_BALBcJ_P0090770 Klhdc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090292.1 MGP_BALBcJ_G0034034.1 mouse_genomes_project 8 104007583 104024424 + MGP_BALBcJ_P0090292 Tsnaxip1 protein_coding protein_coding MGP_BALBcJ_T0015937.1 MGP_BALBcJ_G0014034.1 mouse_genomes_project 8 31664955 31666644 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011006.1 MGP_BALBcJ_G0009131.1 mouse_genomes_project 8 121647721 121647786 + Mir7079 miRNA miRNA MGP_BALBcJ_T0005386.1 MGP_BALBcJ_G0004567.1 mouse_genomes_project 8 124473911 124484254 + A730098A19Rik antisense antisense MGP_BALBcJ_T0091010.1 MGP_BALBcJ_G0034260.1 mouse_genomes_project 8 124246228 124249770 + MGP_BALBcJ_P0091010 Map10 protein_coding protein_coding MGP_BALBcJ_T0089584.1 MGP_BALBcJ_G0033803.1 mouse_genomes_project 8 80786393 80896559 + MGP_BALBcJ_P0089584 Tbc1d9 protein_coding protein_coding MGP_BALBcJ_T0089585.1 MGP_BALBcJ_G0033803.1 mouse_genomes_project 8 80786901 80897072 + MGP_BALBcJ_P0089585 Tbc1d9 protein_coding protein_coding MGP_BALBcJ_T0089586.1 MGP_BALBcJ_G0033803.1 mouse_genomes_project 8 80882655 80895086 + Tbc1d9 protein_coding retained_intron MGP_BALBcJ_T0100127.1 MGP_BALBcJ_G0038163.1 mouse_genomes_project 8 57172912 57173020 + Gm24847 snRNA snRNA MGP_BALBcJ_T0089015.1 MGP_BALBcJ_G0033627.1 mouse_genomes_project 8 62642744 62645213 + MGP_BALBcJ_P0089015 Gm10663 protein_coding protein_coding MGP_BALBcJ_T0009052.1 MGP_BALBcJ_G0007279.1 mouse_genomes_project 8 10286474 10293636 + 2810030D12Rik lincRNA lincRNA MGP_BALBcJ_T0009053.1 MGP_BALBcJ_G0007279.1 mouse_genomes_project 8 10286482 10293648 + 2810030D12Rik lincRNA lincRNA MGP_BALBcJ_T0009054.1 MGP_BALBcJ_G0007279.1 mouse_genomes_project 8 10286506 10287545 + 2810030D12Rik lincRNA lincRNA MGP_BALBcJ_T0009055.1 MGP_BALBcJ_G0007279.1 mouse_genomes_project 8 10286574 10293641 + 2810030D12Rik lincRNA lincRNA MGP_BALBcJ_T0009081.1 MGP_BALBcJ_G0007301.1 mouse_genomes_project 8 44816931 44969788 - lincRNA lincRNA MGP_BALBcJ_T0005341.1 MGP_BALBcJ_G0004528.1 mouse_genomes_project 8 63976631 63979986 - Gm15356 antisense antisense MGP_BALBcJ_T0011697.1 MGP_BALBcJ_G0009822.1 mouse_genomes_project 8 28920317 28920541 - Gm23539 misc_RNA misc_RNA MGP_BALBcJ_T0015916.1 MGP_BALBcJ_G0014013.1 mouse_genomes_project 8 7866747 7867188 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089936.1 MGP_BALBcJ_G0033903.1 mouse_genomes_project 8 88659061 88659538 - MGP_BALBcJ_P0089936 protein_coding protein_coding MGP_BALBcJ_T0090425.1 MGP_BALBcJ_G0034083.1 mouse_genomes_project 8 107879857 107938415 + MGP_BALBcJ_P0090425 Pkd1l3 protein_coding protein_coding MGP_BALBcJ_T0088347.1 MGP_BALBcJ_G0033407.1 mouse_genomes_project 8 19095656 19111143 + MGP_BALBcJ_P0088347 Defb1 protein_coding protein_coding MGP_BALBcJ_T0090458.1 MGP_BALBcJ_G0034100.1 mouse_genomes_project 8 109021575 109022445 - Il34 protein_coding processed_transcript MGP_BALBcJ_T0090459.1 MGP_BALBcJ_G0034100.1 mouse_genomes_project 8 109021586 109088670 - MGP_BALBcJ_P0090459 Il34 protein_coding protein_coding MGP_BALBcJ_T0090460.1 MGP_BALBcJ_G0034100.1 mouse_genomes_project 8 109022025 109035542 - MGP_BALBcJ_P0090460 Il34 protein_coding unknown_likely_coding MGP_BALBcJ_T0090461.1 MGP_BALBcJ_G0034100.1 mouse_genomes_project 8 109034892 109073178 - Il34 protein_coding processed_transcript MGP_BALBcJ_T0090462.1 MGP_BALBcJ_G0034100.1 mouse_genomes_project 8 109035181 109088722 - Il34 protein_coding processed_transcript MGP_BALBcJ_T0010964.1 MGP_BALBcJ_G0009089.1 mouse_genomes_project 8 81829122 81829211 - Mir181c miRNA miRNA MGP_BALBcJ_T0101434.1 MGP_BALBcJ_G0039470.1 mouse_genomes_project 8 127389757 127389884 + Gm26100 snoRNA snoRNA MGP_BALBcJ_T0090273.1 MGP_BALBcJ_G0034025.1 mouse_genomes_project 8 103781322 103798108 + MGP_BALBcJ_P0090273 Fam65a protein_coding protein_coding MGP_BALBcJ_T0088280.1 MGP_BALBcJ_G0033378.1 mouse_genomes_project 8 11947040 11963835 + MGP_BALBcJ_P0088280 Cln8 protein_coding protein_coding MGP_BALBcJ_T0088281.1 MGP_BALBcJ_G0033378.1 mouse_genomes_project 8 11957161 11964178 + MGP_BALBcJ_P0088281 Cln8 protein_coding protein_coding MGP_BALBcJ_T0088282.1 MGP_BALBcJ_G0033378.1 mouse_genomes_project 8 11957227 11970835 + MGP_BALBcJ_P0088282 Cln8 protein_coding protein_coding MGP_BALBcJ_T0088283.1 MGP_BALBcJ_G0033378.1 mouse_genomes_project 8 11958120 11963905 + MGP_BALBcJ_P0088283 Cln8 protein_coding protein_coding MGP_BALBcJ_T0088284.1 MGP_BALBcJ_G0033378.1 mouse_genomes_project 8 11958475 11964038 + MGP_BALBcJ_P0088284 Cln8 protein_coding protein_coding MGP_BALBcJ_T0011696.1 MGP_BALBcJ_G0009821.1 mouse_genomes_project 8 23599604 23599863 - Gm22227 misc_RNA misc_RNA MGP_BALBcJ_T0090163.1 MGP_BALBcJ_G0033983.1 mouse_genomes_project 8 102478640 102527505 - MGP_BALBcJ_P0090163 Cmtm4 protein_coding protein_coding MGP_BALBcJ_T0090288.1 MGP_BALBcJ_G0034032.1 mouse_genomes_project 8 103890584 103936510 - MGP_BALBcJ_P0090288 Gfod2 protein_coding protein_coding MGP_BALBcJ_T0090289.1 MGP_BALBcJ_G0034032.1 mouse_genomes_project 8 103894147 103936476 - MGP_BALBcJ_P0090289 Gfod2 protein_coding protein_coding MGP_BALBcJ_T0090290.1 MGP_BALBcJ_G0034032.1 mouse_genomes_project 8 103904513 103936442 - Gfod2 protein_coding processed_transcript MGP_BALBcJ_T0090565.1 MGP_BALBcJ_G0034131.1 mouse_genomes_project 8 112069213 112227846 - MGP_BALBcJ_P0090565 Adamts18 protein_coding protein_coding MGP_BALBcJ_T0090308.1 MGP_BALBcJ_G0034043.1 mouse_genomes_project 8 104120120 104124505 - MGP_BALBcJ_P0090308 Lcat protein_coding protein_coding MGP_BALBcJ_T0015933.1 MGP_BALBcJ_G0014030.1 mouse_genomes_project 8 20449087 20449342 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089660.1 MGP_BALBcJ_G0033828.1 mouse_genomes_project 8 81715543 81717594 - MGP_BALBcJ_P0089660 protein_coding protein_coding MGP_BALBcJ_T0088220.1 MGP_BALBcJ_G0033355.1 mouse_genomes_project 8 10262785 10286379 - MGP_BALBcJ_P0088220 Grtp1 protein_coding protein_coding MGP_BALBcJ_T0010927.1 MGP_BALBcJ_G0009052.1 mouse_genomes_project 8 9746982 9747086 + Gm26483 miRNA miRNA MGP_BALBcJ_T0090641.1 MGP_BALBcJ_G0034158.1 mouse_genomes_project 8 117983744 118034826 - MGP_BALBcJ_P0090641 Mbtps1 protein_coding protein_coding MGP_BALBcJ_T0090642.1 MGP_BALBcJ_G0034158.1 mouse_genomes_project 8 117983744 118034826 - MGP_BALBcJ_P0090642 Mbtps1 protein_coding protein_coding MGP_BALBcJ_T0009134.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90084166 90113848 - Crnde lincRNA lincRNA MGP_BALBcJ_T0009135.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90084166 90104883 - Crnde lincRNA lincRNA MGP_BALBcJ_T0009136.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90084166 90114137 - Crnde lincRNA lincRNA MGP_BALBcJ_T0009137.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90084378 90113908 - Crnde lincRNA lincRNA MGP_BALBcJ_T0009138.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90094310 90113781 - Crnde lincRNA lincRNA MGP_BALBcJ_T0009140.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90102912 90104883 - Crnde lincRNA lincRNA MGP_BALBcJ_T0009141.1 MGP_BALBcJ_G0007342.1 mouse_genomes_project 8 90104943 90113886 - Crnde lincRNA lincRNA MGP_BALBcJ_T0090303.1 MGP_BALBcJ_G0034039.1 mouse_genomes_project 8 104073429 104074886 + MGP_BALBcJ_P0090303 Nrn1l protein_coding protein_coding MGP_BALBcJ_T0090304.1 MGP_BALBcJ_G0034039.1 mouse_genomes_project 8 104073434 104074880 + MGP_BALBcJ_P0090304 Nrn1l protein_coding protein_coding MGP_BALBcJ_T0005307.1 MGP_BALBcJ_G0004502.1 mouse_genomes_project 8 9944971 9962379 - Gm15347 antisense antisense MGP_BALBcJ_T0101427.1 MGP_BALBcJ_G0039463.1 mouse_genomes_project 8 111899890 111900021 - Gm25766 snoRNA snoRNA MGP_BALBcJ_T0090945.1 MGP_BALBcJ_G0034235.1 mouse_genomes_project 8 122407296 122426206 - MGP_BALBcJ_P0090945 Ccsap protein_coding protein_coding MGP_BALBcJ_T0090946.1 MGP_BALBcJ_G0034235.1 mouse_genomes_project 8 122407309 122426893 - MGP_BALBcJ_P0090946 Ccsap protein_coding protein_coding MGP_BALBcJ_T0015986.1 MGP_BALBcJ_G0014083.1 mouse_genomes_project 8 120108917 120109600 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100145.1 MGP_BALBcJ_G0038181.1 mouse_genomes_project 8 96489872 96489998 - Gm23494 snRNA snRNA MGP_BALBcJ_T0009059.1 MGP_BALBcJ_G0007283.1 mouse_genomes_project 8 21758668 21776387 + Gm26714 lincRNA lincRNA MGP_BALBcJ_T0090157.1 MGP_BALBcJ_G0033979.1 mouse_genomes_project 8 102415962 102438293 - MGP_BALBcJ_P0090157 protein_coding protein_coding MGP_BALBcJ_T0090158.1 MGP_BALBcJ_G0033979.1 mouse_genomes_project 8 102416263 102438271 - MGP_BALBcJ_P0090158 protein_coding protein_coding MGP_BALBcJ_T0090159.1 MGP_BALBcJ_G0033979.1 mouse_genomes_project 8 102416882 102438384 - MGP_BALBcJ_P0090159 protein_coding protein_coding MGP_BALBcJ_T0010991.1 MGP_BALBcJ_G0009116.1 mouse_genomes_project 8 108776939 108776999 + miRNA miRNA MGP_BALBcJ_T0088632.1 MGP_BALBcJ_G0033507.1 mouse_genomes_project 8 31454296 31464385 + MGP_BALBcJ_P0088632 Mboat4 protein_coding protein_coding MGP_BALBcJ_T0090019.1 MGP_BALBcJ_G0033928.1 mouse_genomes_project 8 91836503 91868865 - MGP_BALBcJ_P0090019 Bbs2 protein_coding protein_coding MGP_BALBcJ_T0090020.1 MGP_BALBcJ_G0033928.1 mouse_genomes_project 8 91836693 91838763 - Bbs2 protein_coding processed_transcript MGP_BALBcJ_T0090021.1 MGP_BALBcJ_G0033928.1 mouse_genomes_project 8 91843985 91849094 - Bbs2 protein_coding processed_transcript MGP_BALBcJ_T0089967.1 MGP_BALBcJ_G0033911.1 mouse_genomes_project 8 90585430 90611787 + MGP_BALBcJ_P0089967 Mmp2 protein_coding protein_coding MGP_BALBcJ_T0088583.1 MGP_BALBcJ_G0033493.1 mouse_genomes_project 8 29115907 29123169 - MGP_BALBcJ_P0088583 protein_coding protein_coding MGP_BALBcJ_T0090309.1 MGP_BALBcJ_G0034044.1 mouse_genomes_project 8 104124712 104147661 - MGP_BALBcJ_P0090309 Slc12a4 protein_coding protein_coding MGP_BALBcJ_T0090310.1 MGP_BALBcJ_G0034044.1 mouse_genomes_project 8 104124712 104147732 - MGP_BALBcJ_P0090310 Slc12a4 protein_coding protein_coding MGP_BALBcJ_T0090311.1 MGP_BALBcJ_G0034044.1 mouse_genomes_project 8 104128149 104129632 - Slc12a4 protein_coding retained_intron MGP_BALBcJ_T0090312.1 MGP_BALBcJ_G0034044.1 mouse_genomes_project 8 104135367 104146037 - MGP_BALBcJ_P0090312 Slc12a4 protein_coding protein_coding MGP_BALBcJ_T0090313.1 MGP_BALBcJ_G0034044.1 mouse_genomes_project 8 104141912 104147691 - Slc12a4 protein_coding retained_intron MGP_BALBcJ_T0098656.1 MGP_BALBcJ_G0036710.1 mouse_genomes_project 8 12485293 12485386 + Gm24222 rRNA rRNA MGP_BALBcJ_T0089847.1 MGP_BALBcJ_G0033877.1 mouse_genomes_project 8 83074845 83099645 - MGP_BALBcJ_P0089847 4921524J17Rik protein_coding protein_coding MGP_BALBcJ_T0088923.1 MGP_BALBcJ_G0033602.1 mouse_genomes_project 8 55119734 55124889 - MGP_BALBcJ_P0088923 Sap30 protein_coding protein_coding MGP_BALBcJ_T0011704.1 MGP_BALBcJ_G0009829.1 mouse_genomes_project 8 85348792 85349147 + Gm24841 misc_RNA misc_RNA MGP_BALBcJ_T0101417.1 MGP_BALBcJ_G0039453.1 mouse_genomes_project 8 93529373 93529506 - Gm26265 snoRNA snoRNA MGP_BALBcJ_T0090240.1 MGP_BALBcJ_G0034014.1 mouse_genomes_project 8 103480325 103483029 + MGP_BALBcJ_P0090240 Tmem208 protein_coding protein_coding MGP_BALBcJ_T0090241.1 MGP_BALBcJ_G0034014.1 mouse_genomes_project 8 103480333 103483027 + MGP_BALBcJ_P0090241 Tmem208 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090242.1 MGP_BALBcJ_G0034014.1 mouse_genomes_project 8 103480359 103483024 + MGP_BALBcJ_P0090242 Tmem208 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090243.1 MGP_BALBcJ_G0034014.1 mouse_genomes_project 8 103480366 103489143 + MGP_BALBcJ_P0090243 Tmem208 protein_coding protein_coding MGP_BALBcJ_T0090244.1 MGP_BALBcJ_G0034014.1 mouse_genomes_project 8 103480426 103488725 + MGP_BALBcJ_P0090244 Tmem208 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089854.1 MGP_BALBcJ_G0033880.1 mouse_genomes_project 8 83320533 83375099 - MGP_BALBcJ_P0089854 Neto2 protein_coding protein_coding MGP_BALBcJ_T0089855.1 MGP_BALBcJ_G0033880.1 mouse_genomes_project 8 83320660 83384795 - MGP_BALBcJ_P0089855 Neto2 protein_coding unknown_likely_coding MGP_BALBcJ_T0088564.1 MGP_BALBcJ_G0033482.1 mouse_genomes_project 8 24650954 24667054 + MGP_BALBcJ_P0088564 Eif4ebp1 protein_coding protein_coding MGP_BALBcJ_T0088663.1 MGP_BALBcJ_G0033523.1 mouse_genomes_project 8 34967861 36124582 - MGP_BALBcJ_P0088663 Sgcz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088664.1 MGP_BALBcJ_G0033523.1 mouse_genomes_project 8 34968117 36124582 - MGP_BALBcJ_P0088664 Sgcz protein_coding protein_coding MGP_BALBcJ_T0089837.1 MGP_BALBcJ_G0033872.1 mouse_genomes_project 8 82791810 82802787 - MGP_BALBcJ_P0089837 Zfp791 protein_coding protein_coding MGP_BALBcJ_T0088910.1 MGP_BALBcJ_G0033597.1 mouse_genomes_project 8 53952087 53979052 + MGP_BALBcJ_P0088910 Hpgd protein_coding protein_coding MGP_BALBcJ_T0018421.1 MGP_BALBcJ_G0015653.1 mouse_genomes_project 8 46404314 46429877 + Gm19744 processed_transcript lincRNA MGP_BALBcJ_T0018422.1 MGP_BALBcJ_G0015653.1 mouse_genomes_project 8 46404371 46408136 + Gm19744 processed_transcript lincRNA MGP_BALBcJ_T0018423.1 MGP_BALBcJ_G0015653.1 mouse_genomes_project 8 46404446 46405759 + Gm19744 processed_transcript antisense MGP_BALBcJ_T0018424.1 MGP_BALBcJ_G0015653.1 mouse_genomes_project 8 46404690 46405164 + Gm19744 processed_transcript retained_intron MGP_BALBcJ_T0018425.1 MGP_BALBcJ_G0015653.1 mouse_genomes_project 8 46404752 46405258 + Gm19744 processed_transcript antisense MGP_BALBcJ_T0018426.1 MGP_BALBcJ_G0015653.1 mouse_genomes_project 8 46416378 46430762 + Gm19744 processed_transcript lincRNA MGP_BALBcJ_T0002334.1 MGP_BALBcJ_G0002244.1 mouse_genomes_project 8 107118845 107120549 + TEC TEC MGP_BALBcJ_T0090339.1 MGP_BALBcJ_G0034052.1 mouse_genomes_project 8 104359381 104390113 + MGP_BALBcJ_P0090339 Slc7a6 protein_coding protein_coding MGP_BALBcJ_T0002330.1 MGP_BALBcJ_G0002240.1 mouse_genomes_project 8 97917520 97919539 + TEC TEC MGP_BALBcJ_T0088236.1 MGP_BALBcJ_G0033361.1 mouse_genomes_project 8 10495654 10512306 + MGP_BALBcJ_P0088236 Grk1 protein_coding protein_coding MGP_BALBcJ_T0015950.1 MGP_BALBcJ_G0014047.1 mouse_genomes_project 8 58663496 58663869 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090970.1 MGP_BALBcJ_G0034245.1 mouse_genomes_project 8 123124485 123138317 - MGP_BALBcJ_P0090970 Agt protein_coding protein_coding MGP_BALBcJ_T0011008.1 MGP_BALBcJ_G0009133.1 mouse_genomes_project 8 122594669 122594751 + Mir1967 miRNA miRNA MGP_BALBcJ_T0005355.1 MGP_BALBcJ_G0004540.1 mouse_genomes_project 8 96830946 96854679 + Gm15679 antisense antisense MGP_BALBcJ_T0090585.1 MGP_BALBcJ_G0034136.1 mouse_genomes_project 8 114086922 114111067 - MGP_BALBcJ_P0090585 Maf protein_coding protein_coding MGP_BALBcJ_T0090586.1 MGP_BALBcJ_G0034136.1 mouse_genomes_project 8 114105403 114111765 - MGP_BALBcJ_P0090586 Maf protein_coding protein_coding MGP_BALBcJ_T0101416.1 MGP_BALBcJ_G0039452.1 mouse_genomes_project 8 93518639 93518775 - Gm26493 snoRNA snoRNA MGP_BALBcJ_T0091031.1 MGP_BALBcJ_G0034268.1 mouse_genomes_project 8 125177621 125183644 - MGP_BALBcJ_P0091031 Irf2bp2 protein_coding protein_coding MGP_BALBcJ_T0088811.1 MGP_BALBcJ_G0033564.1 mouse_genomes_project 8 43672168 43690409 + MGP_BALBcJ_P0088811 protein_coding protein_coding MGP_BALBcJ_T0088812.1 MGP_BALBcJ_G0033564.1 mouse_genomes_project 8 43684089 43691201 + protein_coding processed_transcript MGP_BALBcJ_T0090355.1 MGP_BALBcJ_G0034060.1 mouse_genomes_project 8 104881080 105062002 + MGP_BALBcJ_P0090355 Tango6 protein_coding protein_coding MGP_BALBcJ_T0089927.1 MGP_BALBcJ_G0033899.1 mouse_genomes_project 8 86420762 86475904 + MGP_BALBcJ_P0089927 Cyld protein_coding protein_coding MGP_BALBcJ_T0089928.1 MGP_BALBcJ_G0033899.1 mouse_genomes_project 8 86428953 86475904 + MGP_BALBcJ_P0089928 Cyld protein_coding protein_coding MGP_BALBcJ_T0089929.1 MGP_BALBcJ_G0033899.1 mouse_genomes_project 8 86428953 86475904 + MGP_BALBcJ_P0089929 Cyld protein_coding protein_coding MGP_BALBcJ_T0015943.1 MGP_BALBcJ_G0014040.1 mouse_genomes_project 8 38284943 38287496 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002333.1 MGP_BALBcJ_G0002243.1 mouse_genomes_project 8 106986262 106991470 + TEC TEC MGP_BALBcJ_T0015920.1 MGP_BALBcJ_G0014017.1 mouse_genomes_project 8 11208683 11209290 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015976.1 MGP_BALBcJ_G0014073.1 mouse_genomes_project 8 92605681 92606480 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090148.1 MGP_BALBcJ_G0033973.1 mouse_genomes_project 8 100642731 100679035 - MGP_BALBcJ_P0090148 protein_coding protein_coding MGP_BALBcJ_T0005337.1 MGP_BALBcJ_G0004524.1 mouse_genomes_project 8 56123234 56124267 + Gm15882 antisense antisense MGP_BALBcJ_T0101412.1 MGP_BALBcJ_G0039448.1 mouse_genomes_project 8 82734217 82734287 + Gm25506 snoRNA snoRNA MGP_BALBcJ_T0090965.1 MGP_BALBcJ_G0034244.1 mouse_genomes_project 8 123089138 123120829 + MGP_BALBcJ_P0090965 Cog2 protein_coding protein_coding MGP_BALBcJ_T0090966.1 MGP_BALBcJ_G0034244.1 mouse_genomes_project 8 123089175 123098442 + MGP_BALBcJ_P0090966 Cog2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090967.1 MGP_BALBcJ_G0034244.1 mouse_genomes_project 8 123089176 123114342 + Cog2 protein_coding retained_intron MGP_BALBcJ_T0090968.1 MGP_BALBcJ_G0034244.1 mouse_genomes_project 8 123089190 123098414 + MGP_BALBcJ_P0090968 Cog2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090969.1 MGP_BALBcJ_G0034244.1 mouse_genomes_project 8 123103789 123112968 + Cog2 protein_coding retained_intron MGP_BALBcJ_T0089583.1 MGP_BALBcJ_G0033802.1 mouse_genomes_project 8 80786118 80787212 - MGP_BALBcJ_P0089583 Gm10645 protein_coding protein_coding MGP_BALBcJ_T0088907.1 MGP_BALBcJ_G0033595.1 mouse_genomes_project 8 53543785 53579510 - MGP_BALBcJ_P0088907 Adam29 protein_coding protein_coding MGP_BALBcJ_T0005305.1 MGP_BALBcJ_G0004501.1 mouse_genomes_project 8 9912028 9917558 - Gm15350 antisense antisense MGP_BALBcJ_T0005306.1 MGP_BALBcJ_G0004501.1 mouse_genomes_project 8 9912028 9915613 - Gm15350 antisense antisense MGP_BALBcJ_T0011690.1 MGP_BALBcJ_G0009815.1 mouse_genomes_project 8 1262919 1263207 + Gm26102 misc_RNA misc_RNA MGP_BALBcJ_T0009106.1 MGP_BALBcJ_G0007323.1 mouse_genomes_project 8 84573591 84574470 + 2010110E17Rik lincRNA lincRNA MGP_BALBcJ_T0090118.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93448773 93481563 + MGP_BALBcJ_P0090118 Ndrg4 protein_coding protein_coding MGP_BALBcJ_T0090119.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93449878 93487217 + MGP_BALBcJ_P0090119 Ndrg4 protein_coding protein_coding MGP_BALBcJ_T0090120.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93450035 93487213 + MGP_BALBcJ_P0090120 Ndrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090121.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93450137 93487226 + MGP_BALBcJ_P0090121 Ndrg4 protein_coding protein_coding MGP_BALBcJ_T0090122.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93478981 93483405 + Ndrg4 protein_coding processed_transcript MGP_BALBcJ_T0090123.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93481528 93483903 + Ndrg4 protein_coding retained_intron MGP_BALBcJ_T0090124.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93482325 93486179 + Ndrg4 protein_coding processed_transcript MGP_BALBcJ_T0090125.1 MGP_BALBcJ_G0033966.1 mouse_genomes_project 8 93484157 93485476 + Ndrg4 protein_coding retained_intron MGP_BALBcJ_T0015928.1 MGP_BALBcJ_G0014025.1 mouse_genomes_project 8 18153112 18154257 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090636.1 MGP_BALBcJ_G0034157.1 mouse_genomes_project 8 117953260 117977356 - MGP_BALBcJ_P0090636 Slc38a8 protein_coding protein_coding MGP_BALBcJ_T0090637.1 MGP_BALBcJ_G0034157.1 mouse_genomes_project 8 117959179 117972373 - MGP_BALBcJ_P0090637 Slc38a8 protein_coding protein_coding MGP_BALBcJ_T0090638.1 MGP_BALBcJ_G0034157.1 mouse_genomes_project 8 117959757 117969623 - Slc38a8 protein_coding retained_intron MGP_BALBcJ_T0090639.1 MGP_BALBcJ_G0034157.1 mouse_genomes_project 8 117968927 117976952 - MGP_BALBcJ_P0090639 Slc38a8 protein_coding protein_coding MGP_BALBcJ_T0090640.1 MGP_BALBcJ_G0034157.1 mouse_genomes_project 8 117971470 117977353 - MGP_BALBcJ_P0090640 Slc38a8 protein_coding protein_coding MGP_BALBcJ_T0088355.1 MGP_BALBcJ_G0033415.1 mouse_genomes_project 8 19262485 19264568 + MGP_BALBcJ_P0088355 Defb13 protein_coding protein_coding MGP_BALBcJ_T0100156.1 MGP_BALBcJ_G0038192.1 mouse_genomes_project 8 116889374 116889481 - Gm24035 snRNA snRNA MGP_BALBcJ_T0089305.1 MGP_BALBcJ_G0033716.1 mouse_genomes_project 8 68875788 68900170 - MGP_BALBcJ_P0089305 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089306.1 MGP_BALBcJ_G0033716.1 mouse_genomes_project 8 68878521 68900643 - MGP_BALBcJ_P0089306 protein_coding protein_coding MGP_BALBcJ_T0089307.1 MGP_BALBcJ_G0033716.1 mouse_genomes_project 8 68878521 68900086 - MGP_BALBcJ_P0089307 protein_coding protein_coding MGP_BALBcJ_T0089308.1 MGP_BALBcJ_G0033716.1 mouse_genomes_project 8 68882829 68900170 - protein_coding processed_transcript MGP_BALBcJ_T0089309.1 MGP_BALBcJ_G0033716.1 mouse_genomes_project 8 68883424 68884040 - protein_coding retained_intron MGP_BALBcJ_T0089310.1 MGP_BALBcJ_G0033716.1 mouse_genomes_project 8 68883451 68900188 - protein_coding processed_transcript MGP_BALBcJ_T0089483.1 MGP_BALBcJ_G0033768.1 mouse_genomes_project 8 72447201 72470187 + MGP_BALBcJ_P0089483 Isx protein_coding protein_coding MGP_BALBcJ_T0089484.1 MGP_BALBcJ_G0033768.1 mouse_genomes_project 8 72447568 72469828 + MGP_BALBcJ_P0089484 Isx protein_coding protein_coding MGP_BALBcJ_T0011005.1 MGP_BALBcJ_G0009130.1 mouse_genomes_project 8 121152348 121152459 - Mir6396 miRNA miRNA MGP_BALBcJ_T0009063.1 MGP_BALBcJ_G0007287.1 mouse_genomes_project 8 25997154 25999256 + Gm26795 lincRNA lincRNA MGP_BALBcJ_T0009064.1 MGP_BALBcJ_G0007287.1 mouse_genomes_project 8 25997181 25997958 + Gm26795 lincRNA lincRNA MGP_BALBcJ_T0088639.1 MGP_BALBcJ_G0033514.1 mouse_genomes_project 8 32848559 32872685 - MGP_BALBcJ_P0088639 Eri1 protein_coding protein_coding MGP_BALBcJ_T0088073.1 MGP_BALBcJ_G0033310.1 mouse_genomes_project 8 1235989 1239190 + MGP_BALBcJ_P0088073 Tgfbr3l protein_coding protein_coding MGP_BALBcJ_T0088074.1 MGP_BALBcJ_G0033310.1 mouse_genomes_project 8 1236408 1237290 + Tgfbr3l protein_coding processed_transcript MGP_BALBcJ_T0088075.1 MGP_BALBcJ_G0033310.1 mouse_genomes_project 8 1238094 1239190 + Tgfbr3l protein_coding processed_transcript MGP_BALBcJ_T0089995.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91577652 91719411 + MGP_BALBcJ_P0089995 Gnao1 protein_coding protein_coding MGP_BALBcJ_T0089996.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91578322 91579459 + Gnao1 protein_coding retained_intron MGP_BALBcJ_T0089997.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91578483 91725252 + MGP_BALBcJ_P0089997 Gnao1 protein_coding unknown_likely_coding MGP_BALBcJ_T0089998.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91578529 91738300 + MGP_BALBcJ_P0089998 Gnao1 protein_coding protein_coding MGP_BALBcJ_T0089999.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91578531 91737869 + MGP_BALBcJ_P0089999 Gnao1 protein_coding protein_coding MGP_BALBcJ_T0090000.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91579004 91726497 + Gnao1 protein_coding processed_transcript MGP_BALBcJ_T0090001.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91664412 91737076 + MGP_BALBcJ_P0090001 Gnao1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090002.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91718512 91719683 + Gnao1 protein_coding retained_intron MGP_BALBcJ_T0090003.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91719412 91736994 + MGP_BALBcJ_P0090003 Gnao1 protein_coding protein_coding MGP_BALBcJ_T0090004.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91719412 91736973 + MGP_BALBcJ_P0090004 Gnao1 protein_coding protein_coding MGP_BALBcJ_T0090005.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91721946 91725580 + Gnao1 protein_coding processed_transcript MGP_BALBcJ_T0090006.1 MGP_BALBcJ_G0033924.1 mouse_genomes_project 8 91731768 91735934 + Gnao1 protein_coding retained_intron MGP_BALBcJ_T0090314.1 MGP_BALBcJ_G0034045.1 mouse_genomes_project 8 104155933 104161833 - MGP_BALBcJ_P0090314 Dpep3 protein_coding protein_coding MGP_BALBcJ_T0090255.1 MGP_BALBcJ_G0034018.1 mouse_genomes_project 8 103539496 103571162 - MGP_BALBcJ_P0090255 Kctd19 protein_coding protein_coding MGP_BALBcJ_T0090256.1 MGP_BALBcJ_G0034018.1 mouse_genomes_project 8 103539496 103571162 - MGP_BALBcJ_P0090256 Kctd19 protein_coding protein_coding MGP_BALBcJ_T0090257.1 MGP_BALBcJ_G0034018.1 mouse_genomes_project 8 103539631 103542090 - MGP_BALBcJ_P0090257 Kctd19 protein_coding protein_coding MGP_BALBcJ_T0090258.1 MGP_BALBcJ_G0034018.1 mouse_genomes_project 8 103550498 103571116 - MGP_BALBcJ_P0090258 Kctd19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0015953.1 MGP_BALBcJ_G0014050.1 mouse_genomes_project 8 64129632 64129929 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088644.1 MGP_BALBcJ_G0033518.1 mouse_genomes_project 8 33482804 33536660 + MGP_BALBcJ_P0088644 D8Ertd82e protein_coding protein_coding MGP_BALBcJ_T0088645.1 MGP_BALBcJ_G0033518.1 mouse_genomes_project 8 33482837 33494581 + D8Ertd82e protein_coding retained_intron MGP_BALBcJ_T0088646.1 MGP_BALBcJ_G0033518.1 mouse_genomes_project 8 33482837 33490718 + D8Ertd82e protein_coding retained_intron MGP_BALBcJ_T0011001.1 MGP_BALBcJ_G0009126.1 mouse_genomes_project 8 118933785 118933876 - Gm22715 miRNA miRNA MGP_BALBcJ_T0088371.1 MGP_BALBcJ_G0033422.1 mouse_genomes_project 8 19482527 19500171 - MGP_BALBcJ_P0088371 Ckap2 protein_coding protein_coding MGP_BALBcJ_T0009050.1 MGP_BALBcJ_G0007277.1 mouse_genomes_project 8 9356525 9356927 + Gm29175 lincRNA lincRNA MGP_BALBcJ_T0098407.1 MGP_BALBcJ_G0036461.1 mouse_genomes_project 8 121118382 121118768 + pseudogene pseudogene MGP_BALBcJ_T0089744.1 MGP_BALBcJ_G0033849.1 mouse_genomes_project 8 82512379 82517465 - MGP_BALBcJ_P0089744 Calr protein_coding protein_coding MGP_BALBcJ_T0089745.1 MGP_BALBcJ_G0033849.1 mouse_genomes_project 8 82513122 82515446 - Calr protein_coding retained_intron MGP_BALBcJ_T0089746.1 MGP_BALBcJ_G0033849.1 mouse_genomes_project 8 82515966 82517361 - Calr protein_coding retained_intron MGP_BALBcJ_T0089747.1 MGP_BALBcJ_G0033849.1 mouse_genomes_project 8 82516280 82517357 - Calr protein_coding retained_intron MGP_BALBcJ_T0089449.1 MGP_BALBcJ_G0033753.1 mouse_genomes_project 8 69897943 69902022 + MGP_BALBcJ_P0089449 Fam32a protein_coding protein_coding MGP_BALBcJ_T0089922.1 MGP_BALBcJ_G0033897.1 mouse_genomes_project 8 86350839 86360242 - MGP_BALBcJ_P0089922 Snx20 protein_coding protein_coding MGP_BALBcJ_T0089142.1 MGP_BALBcJ_G0033667.1 mouse_genomes_project 8 67700247 67707549 + MGP_BALBcJ_P0089142 Hapln4 protein_coding protein_coding MGP_BALBcJ_T0009083.1 MGP_BALBcJ_G0007303.1 mouse_genomes_project 8 54964586 54973086 + lincRNA lincRNA MGP_BALBcJ_T0018446.1 MGP_BALBcJ_G0015660.1 mouse_genomes_project 8 85087028 85092899 - Gm27208 processed_transcript lincRNA MGP_BALBcJ_T0018447.1 MGP_BALBcJ_G0015660.1 mouse_genomes_project 8 85092416 85093521 - Gm27208 processed_transcript TEC MGP_BALBcJ_T0090971.1 MGP_BALBcJ_G0034246.1 mouse_genomes_project 8 123145119 123186672 + MGP_BALBcJ_P0090971 Capn9 protein_coding protein_coding MGP_BALBcJ_T0090972.1 MGP_BALBcJ_G0034246.1 mouse_genomes_project 8 123145121 123156596 + MGP_BALBcJ_P0090972 Capn9 protein_coding protein_coding MGP_BALBcJ_T0090973.1 MGP_BALBcJ_G0034246.1 mouse_genomes_project 8 123180533 123182581 + Capn9 protein_coding processed_transcript MGP_BALBcJ_T0018452.1 MGP_BALBcJ_G0015663.1 mouse_genomes_project 8 104324886 104327587 + 1810019D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0018453.1 MGP_BALBcJ_G0015663.1 mouse_genomes_project 8 104324921 104327378 + 1810019D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0018454.1 MGP_BALBcJ_G0015663.1 mouse_genomes_project 8 104326551 104328012 + 1810019D21Rik processed_transcript processed_transcript MGP_BALBcJ_T0089510.1 MGP_BALBcJ_G0033776.1 mouse_genomes_project 8 74820243 75086336 - MGP_BALBcJ_P0089510 Arhgap10 protein_coding protein_coding MGP_BALBcJ_T0088921.1 MGP_BALBcJ_G0033600.1 mouse_genomes_project 8 54953411 54956948 + MGP_BALBcJ_P0088921 Hand2 protein_coding protein_coding MGP_BALBcJ_T0090796.1 MGP_BALBcJ_G0034195.1 mouse_genomes_project 8 120882133 120885696 - MGP_BALBcJ_P0090796 Trhr2 protein_coding protein_coding MGP_BALBcJ_T0089114.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67432571 67472714 + MGP_BALBcJ_P0089114 Pbx4 protein_coding protein_coding MGP_BALBcJ_T0089115.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67432704 67459782 + Pbx4 protein_coding retained_intron MGP_BALBcJ_T0089116.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67432717 67472714 + MGP_BALBcJ_P0089116 Pbx4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089117.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67432740 67471108 + MGP_BALBcJ_P0089117 Pbx4 protein_coding protein_coding MGP_BALBcJ_T0089118.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67432742 67472714 + MGP_BALBcJ_P0089118 Pbx4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089119.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67432770 67472714 + MGP_BALBcJ_P0089119 Pbx4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089120.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67448371 67465563 + Pbx4 protein_coding processed_transcript MGP_BALBcJ_T0089121.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67466701 67471060 + Pbx4 protein_coding retained_intron MGP_BALBcJ_T0089122.1 MGP_BALBcJ_G0033658.1 mouse_genomes_project 8 67466898 67472714 + Pbx4 protein_coding retained_intron MGP_BALBcJ_T0089547.1 MGP_BALBcJ_G0033789.1 mouse_genomes_project 8 77233896 77274096 + MGP_BALBcJ_P0089547 Otud4 protein_coding protein_coding MGP_BALBcJ_T0089548.1 MGP_BALBcJ_G0033789.1 mouse_genomes_project 8 77233982 77274044 + MGP_BALBcJ_P0089548 Otud4 protein_coding protein_coding MGP_BALBcJ_T0089549.1 MGP_BALBcJ_G0033789.1 mouse_genomes_project 8 77246469 77254316 + Otud4 protein_coding retained_intron MGP_BALBcJ_T0089550.1 MGP_BALBcJ_G0033789.1 mouse_genomes_project 8 77246881 77256339 + Otud4 protein_coding retained_intron MGP_BALBcJ_T0089551.1 MGP_BALBcJ_G0033789.1 mouse_genomes_project 8 77256179 77264860 + MGP_BALBcJ_P0089551 Otud4 protein_coding protein_coding MGP_BALBcJ_T0089552.1 MGP_BALBcJ_G0033789.1 mouse_genomes_project 8 77263193 77267750 + MGP_BALBcJ_P0089552 Otud4 protein_coding protein_coding MGP_BALBcJ_T0090372.1 MGP_BALBcJ_G0034068.1 mouse_genomes_project 8 105279853 105284098 + MGP_BALBcJ_P0090372 Nip7 protein_coding protein_coding MGP_BALBcJ_T0090373.1 MGP_BALBcJ_G0034068.1 mouse_genomes_project 8 105279853 105284098 + MGP_BALBcJ_P0090373 Nip7 protein_coding protein_coding MGP_BALBcJ_T0088824.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44075490 44103897 + MGP_BALBcJ_P0088824 Cenpu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088825.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44075495 44103474 + MGP_BALBcJ_P0088825 Cenpu protein_coding protein_coding MGP_BALBcJ_T0088826.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44075496 44079672 + Cenpu protein_coding retained_intron MGP_BALBcJ_T0088827.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44075522 44102258 + MGP_BALBcJ_P0088827 Cenpu protein_coding protein_coding MGP_BALBcJ_T0088828.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44083512 44085891 + Cenpu protein_coding processed_transcript MGP_BALBcJ_T0088829.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44085161 44096720 + Cenpu protein_coding retained_intron MGP_BALBcJ_T0088830.1 MGP_BALBcJ_G0033568.1 mouse_genomes_project 8 44097062 44102268 + Cenpu protein_coding retained_intron MGP_BALBcJ_T0015973.1 MGP_BALBcJ_G0014070.1 mouse_genomes_project 8 83543567 83544632 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089206.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67917571 67928024 + MGP_BALBcJ_P0089206 Cope protein_coding protein_coding MGP_BALBcJ_T0089207.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67917794 67921471 + Cope protein_coding retained_intron MGP_BALBcJ_T0089208.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67917822 67928027 + Cope protein_coding retained_intron MGP_BALBcJ_T0089209.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67917826 67925526 + MGP_BALBcJ_P0089209 Cope protein_coding protein_coding MGP_BALBcJ_T0089210.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67917846 67921976 + Cope protein_coding retained_intron MGP_BALBcJ_T0089211.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67917849 67927806 + MGP_BALBcJ_P0089211 Cope protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089212.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67920751 67928024 + MGP_BALBcJ_P0089212 Cope protein_coding protein_coding MGP_BALBcJ_T0089213.1 MGP_BALBcJ_G0033679.1 mouse_genomes_project 8 67923552 67928024 + MGP_BALBcJ_P0089213 Cope protein_coding protein_coding MGP_BALBcJ_T0009073.1 MGP_BALBcJ_G0007293.1 mouse_genomes_project 8 31434843 31436345 + Gm26768 lincRNA lincRNA MGP_BALBcJ_T0090427.1 MGP_BALBcJ_G0034085.1 mouse_genomes_project 8 107971835 107990926 + MGP_BALBcJ_P0090427 Zfp821 protein_coding unknown_likely_coding MGP_BALBcJ_T0090156.1 MGP_BALBcJ_G0033978.1 mouse_genomes_project 8 102403639 102416519 - MGP_BALBcJ_P0090156 Cmtm2a protein_coding protein_coding MGP_BALBcJ_T0090742.1 MGP_BALBcJ_G0034185.1 mouse_genomes_project 8 120055500 120068322 - MGP_BALBcJ_P0090742 protein_coding protein_coding MGP_BALBcJ_T0090743.1 MGP_BALBcJ_G0034185.1 mouse_genomes_project 8 120055548 120068237 - MGP_BALBcJ_P0090743 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090744.1 MGP_BALBcJ_G0034185.1 mouse_genomes_project 8 120055548 120068237 - MGP_BALBcJ_P0090744 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090745.1 MGP_BALBcJ_G0034185.1 mouse_genomes_project 8 120056534 120070688 - MGP_BALBcJ_P0090745 protein_coding protein_coding MGP_BALBcJ_T0015962.1 MGP_BALBcJ_G0014059.1 mouse_genomes_project 8 77138161 77139136 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089594.1 MGP_BALBcJ_G0033806.1 mouse_genomes_project 8 80972244 81003403 + MGP_BALBcJ_P0089594 Mgat4d protein_coding protein_coding MGP_BALBcJ_T0089595.1 MGP_BALBcJ_G0033806.1 mouse_genomes_project 8 80981530 81007182 + Mgat4d protein_coding processed_transcript MGP_BALBcJ_T0100117.1 MGP_BALBcJ_G0038153.1 mouse_genomes_project 8 29573986 29574106 + Gm22140 snRNA snRNA MGP_BALBcJ_T0009094.1 MGP_BALBcJ_G0007313.1 mouse_genomes_project 8 72191568 72408265 - lincRNA lincRNA MGP_BALBcJ_T0009095.1 MGP_BALBcJ_G0007313.1 mouse_genomes_project 8 72401574 72408238 - lincRNA lincRNA MGP_BALBcJ_T0088226.1 MGP_BALBcJ_G0033357.1 mouse_genomes_project 8 10341016 10374736 - MGP_BALBcJ_P0088226 Dcun1d2 protein_coding protein_coding MGP_BALBcJ_T0088227.1 MGP_BALBcJ_G0033357.1 mouse_genomes_project 8 10341024 10375021 - MGP_BALBcJ_P0088227 Dcun1d2 protein_coding protein_coding MGP_BALBcJ_T0088228.1 MGP_BALBcJ_G0033357.1 mouse_genomes_project 8 10341025 10374726 - MGP_BALBcJ_P0088228 Dcun1d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088229.1 MGP_BALBcJ_G0033357.1 mouse_genomes_project 8 10341026 10375020 - Dcun1d2 protein_coding processed_transcript MGP_BALBcJ_T0088230.1 MGP_BALBcJ_G0033357.1 mouse_genomes_project 8 10344964 10374729 - MGP_BALBcJ_P0088230 Dcun1d2 protein_coding protein_coding MGP_BALBcJ_T0088231.1 MGP_BALBcJ_G0033357.1 mouse_genomes_project 8 10364564 10367628 - Dcun1d2 protein_coding retained_intron MGP_BALBcJ_T0089462.1 MGP_BALBcJ_G0033759.1 mouse_genomes_project 8 70140137 70155040 - MGP_BALBcJ_P0089462 Cherp protein_coding protein_coding MGP_BALBcJ_T0088837.1 MGP_BALBcJ_G0033571.1 mouse_genomes_project 8 44264390 44373019 + MGP_BALBcJ_P0088837 Irf2 protein_coding protein_coding MGP_BALBcJ_T0088119.1 MGP_BALBcJ_G0033328.1 mouse_genomes_project 8 7012560 7027009 + MGP_BALBcJ_P0088119 Abhd13 protein_coding protein_coding MGP_BALBcJ_T0088120.1 MGP_BALBcJ_G0033328.1 mouse_genomes_project 8 7012570 7027009 + MGP_BALBcJ_P0088120 Abhd13 protein_coding protein_coding MGP_BALBcJ_T0090117.1 MGP_BALBcJ_G0033965.1 mouse_genomes_project 8 93403756 93415636 + MGP_BALBcJ_P0090117 Gins3 protein_coding protein_coding MGP_BALBcJ_T0088316.1 MGP_BALBcJ_G0033385.1 mouse_genomes_project 8 15708473 15764290 - MGP_BALBcJ_P0088316 Angpt2 protein_coding protein_coding MGP_BALBcJ_T0088317.1 MGP_BALBcJ_G0033385.1 mouse_genomes_project 8 15710301 15719197 - Angpt2 protein_coding processed_transcript MGP_BALBcJ_T0089992.1 MGP_BALBcJ_G0033921.1 mouse_genomes_project 8 91074155 91113046 - MGP_BALBcJ_P0089992 Ces1g protein_coding protein_coding MGP_BALBcJ_T0009159.1 MGP_BALBcJ_G0007356.1 mouse_genomes_project 8 109145974 109224876 - Gm26816 lincRNA lincRNA MGP_BALBcJ_T0009132.1 MGP_BALBcJ_G0007340.1 mouse_genomes_project 8 89669634 89675133 - Gm28515 lincRNA lincRNA MGP_BALBcJ_T0100153.1 MGP_BALBcJ_G0038189.1 mouse_genomes_project 8 110400312 110400419 + Gm22827 snRNA snRNA MGP_BALBcJ_T0090284.1 MGP_BALBcJ_G0034029.1 mouse_genomes_project 8 103877889 103880229 + MGP_BALBcJ_P0090284 Pard6a protein_coding protein_coding MGP_BALBcJ_T0090285.1 MGP_BALBcJ_G0034029.1 mouse_genomes_project 8 103878382 103880228 + MGP_BALBcJ_P0090285 Pard6a protein_coding protein_coding MGP_BALBcJ_T0089835.1 MGP_BALBcJ_G0033870.1 mouse_genomes_project 8 82764624 82766122 + MGP_BALBcJ_P0089835 Wdr83os protein_coding protein_coding MGP_BALBcJ_T0089220.1 MGP_BALBcJ_G0033683.1 mouse_genomes_project 8 67997865 68055445 - Crtc1 protein_coding retained_intron MGP_BALBcJ_T0089221.1 MGP_BALBcJ_G0033683.1 mouse_genomes_project 8 67997865 68055445 - MGP_BALBcJ_P0089221 Crtc1 protein_coding protein_coding MGP_BALBcJ_T0089222.1 MGP_BALBcJ_G0033683.1 mouse_genomes_project 8 68013272 68018336 - Crtc1 protein_coding retained_intron MGP_BALBcJ_T0089223.1 MGP_BALBcJ_G0033683.1 mouse_genomes_project 8 68020376 68055441 - Crtc1 protein_coding retained_intron MGP_BALBcJ_T0089224.1 MGP_BALBcJ_G0033683.1 mouse_genomes_project 8 68021653 68047238 - Crtc1 protein_coding processed_transcript MGP_BALBcJ_T0088122.1 MGP_BALBcJ_G0033330.1 mouse_genomes_project 8 7288645 7686754 + MGP_BALBcJ_P0088122 Myo16 protein_coding unknown_likely_coding MGP_BALBcJ_T0088123.1 MGP_BALBcJ_G0033330.1 mouse_genomes_project 8 7311633 7686745 + MGP_BALBcJ_P0088123 Myo16 protein_coding protein_coding MGP_BALBcJ_T0010981.1 MGP_BALBcJ_G0009106.1 mouse_genomes_project 8 94422488 94422564 + Gm24132 miRNA miRNA MGP_BALBcJ_T0009098.1 MGP_BALBcJ_G0007316.1 mouse_genomes_project 8 78533555 78538793 - Gm27048 lincRNA lincRNA MGP_BALBcJ_T0091033.1 MGP_BALBcJ_G0034270.1 mouse_genomes_project 8 125559179 125583044 - MGP_BALBcJ_P0091033 Rbm34 protein_coding protein_coding MGP_BALBcJ_T0088813.1 MGP_BALBcJ_G0033565.1 mouse_genomes_project 8 43726964 43731452 - MGP_BALBcJ_P0088813 Slc25a4 protein_coding protein_coding MGP_BALBcJ_T0088814.1 MGP_BALBcJ_G0033565.1 mouse_genomes_project 8 43728137 43731198 - Slc25a4 protein_coding retained_intron MGP_BALBcJ_T0010944.1 MGP_BALBcJ_G0009069.1 mouse_genomes_project 8 45118556 45118636 + Gm27409 miRNA miRNA MGP_BALBcJ_T0088662.1 MGP_BALBcJ_G0033522.1 mouse_genomes_project 8 34387034 34388961 + MGP_BALBcJ_P0088662 AI429214 protein_coding protein_coding MGP_BALBcJ_T0088333.1 MGP_BALBcJ_G0033395.1 mouse_genomes_project 8 16191003 16192693 + MGP_BALBcJ_P0088333 Spag11a protein_coding protein_coding MGP_BALBcJ_T0090691.1 MGP_BALBcJ_G0034174.1 mouse_genomes_project 8 118717602 119051294 + MGP_BALBcJ_P0090691 Gse1 protein_coding protein_coding MGP_BALBcJ_T0090692.1 MGP_BALBcJ_G0034174.1 mouse_genomes_project 8 118980942 119079052 + MGP_BALBcJ_P0090692 Gse1 protein_coding protein_coding MGP_BALBcJ_T0090693.1 MGP_BALBcJ_G0034174.1 mouse_genomes_project 8 119033535 119077142 + MGP_BALBcJ_P0090693 Gse1 protein_coding protein_coding MGP_BALBcJ_T0090694.1 MGP_BALBcJ_G0034174.1 mouse_genomes_project 8 119035107 119076988 + MGP_BALBcJ_P0090694 Gse1 protein_coding protein_coding MGP_BALBcJ_T0090695.1 MGP_BALBcJ_G0034174.1 mouse_genomes_project 8 119068942 119070934 + Gse1 protein_coding retained_intron MGP_BALBcJ_T0090696.1 MGP_BALBcJ_G0034174.1 mouse_genomes_project 8 119068990 119072872 + Gse1 protein_coding processed_transcript MGP_BALBcJ_T0090162.1 MGP_BALBcJ_G0033982.1 mouse_genomes_project 8 102470148 102477216 + MGP_BALBcJ_P0090162 Cmtm3 protein_coding unknown_likely_coding MGP_BALBcJ_T0090245.1 MGP_BALBcJ_G0034015.1 mouse_genomes_project 8 103483134 103501820 - Fhod1 protein_coding retained_intron MGP_BALBcJ_T0090246.1 MGP_BALBcJ_G0034015.1 mouse_genomes_project 8 103483134 103501864 - MGP_BALBcJ_P0090246 Fhod1 protein_coding protein_coding MGP_BALBcJ_T0090247.1 MGP_BALBcJ_G0034015.1 mouse_genomes_project 8 103484911 103485538 - Fhod1 protein_coding retained_intron MGP_BALBcJ_T0090248.1 MGP_BALBcJ_G0034015.1 mouse_genomes_project 8 103490476 103491831 - Fhod1 protein_coding retained_intron MGP_BALBcJ_T0088350.1 MGP_BALBcJ_G0033410.1 mouse_genomes_project 8 19172095 19175540 + MGP_BALBcJ_P0088350 Defb10 protein_coding protein_coding MGP_BALBcJ_T0098723.1 MGP_BALBcJ_G0036777.1 mouse_genomes_project 8 750113 750403 - Rprl2 ribozyme ribozyme MGP_BALBcJ_T0101414.1 MGP_BALBcJ_G0039450.1 mouse_genomes_project 8 87403848 87403980 - Gm24212 snoRNA snoRNA MGP_BALBcJ_T0005300.1 MGP_BALBcJ_G0004496.1 mouse_genomes_project 8 613280 614429 - antisense antisense MGP_BALBcJ_T0089608.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81306582 81338979 - MGP_BALBcJ_P0089608 Pkn1 protein_coding protein_coding MGP_BALBcJ_T0089609.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81306911 81333870 - MGP_BALBcJ_P0089609 Pkn1 protein_coding protein_coding MGP_BALBcJ_T0089610.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81306919 81338897 - MGP_BALBcJ_P0089610 Pkn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089611.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81306947 81312351 - Pkn1 protein_coding retained_intron MGP_BALBcJ_T0089612.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81307407 81308601 - Pkn1 protein_coding processed_transcript MGP_BALBcJ_T0089613.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81309847 81310414 - Pkn1 protein_coding retained_intron MGP_BALBcJ_T0089614.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81310300 81315414 - Pkn1 protein_coding processed_transcript MGP_BALBcJ_T0089615.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81315362 81319213 - Pkn1 protein_coding retained_intron MGP_BALBcJ_T0089616.1 MGP_BALBcJ_G0033814.1 mouse_genomes_project 8 81329725 81338967 - Pkn1 protein_coding retained_intron MGP_BALBcJ_T0009066.1 MGP_BALBcJ_G0007289.1 mouse_genomes_project 8 29391550 29399226 + Gm26578 lincRNA lincRNA MGP_BALBcJ_T0089239.1 MGP_BALBcJ_G0033688.1 mouse_genomes_project 8 68122950 68131641 - MGP_BALBcJ_P0089239 protein_coding protein_coding MGP_BALBcJ_T0089240.1 MGP_BALBcJ_G0033688.1 mouse_genomes_project 8 68122950 68131867 - MGP_BALBcJ_P0089240 protein_coding protein_coding MGP_BALBcJ_T0089241.1 MGP_BALBcJ_G0033688.1 mouse_genomes_project 8 68122950 68131636 - MGP_BALBcJ_P0089241 protein_coding protein_coding MGP_BALBcJ_T0089242.1 MGP_BALBcJ_G0033688.1 mouse_genomes_project 8 68122951 68131665 - protein_coding retained_intron MGP_BALBcJ_T0087981.1 MGP_BALBcJ_G0033286.1 mouse_genomes_project 8 407590 424057 + MGP_BALBcJ_P0087981 1700019B03Rik protein_coding protein_coding MGP_BALBcJ_T0087982.1 MGP_BALBcJ_G0033286.1 mouse_genomes_project 8 407590 424057 + MGP_BALBcJ_P0087982 1700019B03Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0087983.1 MGP_BALBcJ_G0033286.1 mouse_genomes_project 8 412556 424060 + MGP_BALBcJ_P0087983 1700019B03Rik protein_coding protein_coding MGP_BALBcJ_T0089380.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69243952 69255807 + MGP_BALBcJ_P0089380 Fam129c protein_coding protein_coding MGP_BALBcJ_T0089381.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69245310 69255795 + Fam129c protein_coding retained_intron MGP_BALBcJ_T0089382.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69247618 69255437 + MGP_BALBcJ_P0089382 Fam129c protein_coding unknown_likely_coding MGP_BALBcJ_T0089383.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69247703 69249610 + Fam129c protein_coding processed_transcript MGP_BALBcJ_T0089384.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69248437 69250104 + Fam129c protein_coding retained_intron MGP_BALBcJ_T0089385.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69250136 69250813 + Fam129c protein_coding retained_intron MGP_BALBcJ_T0089386.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69250220 69255795 + Fam129c protein_coding retained_intron MGP_BALBcJ_T0089387.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69252614 69255442 + MGP_BALBcJ_P0089387 Fam129c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089388.1 MGP_BALBcJ_G0033736.1 mouse_genomes_project 8 69252831 69255804 + MGP_BALBcJ_P0089388 Fam129c protein_coding protein_coding MGP_BALBcJ_T0088127.1 MGP_BALBcJ_G0033333.1 mouse_genomes_project 8 8373048 8510601 + MGP_BALBcJ_P0088127 Col4a2 protein_coding protein_coding MGP_BALBcJ_T0088128.1 MGP_BALBcJ_G0033333.1 mouse_genomes_project 8 8465229 8481527 + MGP_BALBcJ_P0088128 Col4a2 protein_coding protein_coding MGP_BALBcJ_T0088129.1 MGP_BALBcJ_G0033333.1 mouse_genomes_project 8 8502422 8505016 + Col4a2 protein_coding processed_transcript MGP_BALBcJ_T0011699.1 MGP_BALBcJ_G0009824.1 mouse_genomes_project 8 43630131 43630404 + Gm23030 misc_RNA misc_RNA MGP_BALBcJ_T0089347.1 MGP_BALBcJ_G0033724.1 mouse_genomes_project 8 69098605 69105568 - MGP_BALBcJ_P0089347 Abhd8 protein_coding protein_coding MGP_BALBcJ_T0005343.1 MGP_BALBcJ_G0004530.1 mouse_genomes_project 8 65922789 65926643 + 1700125H03Rik antisense antisense MGP_BALBcJ_T0005344.1 MGP_BALBcJ_G0004530.1 mouse_genomes_project 8 65922821 65930064 + 1700125H03Rik antisense antisense MGP_BALBcJ_T0010948.1 MGP_BALBcJ_G0009073.1 mouse_genomes_project 8 65186329 65186422 - Gm44391 miRNA miRNA MGP_BALBcJ_T0088088.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1314465 1349432 + MGP_BALBcJ_P0088088 Ccl25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088089.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1314482 1337885 + MGP_BALBcJ_P0088089 Ccl25 protein_coding non_stop_decay MGP_BALBcJ_T0088090.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1314485 1337885 + MGP_BALBcJ_P0088090 Ccl25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088091.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1314488 1349088 + MGP_BALBcJ_P0088091 Ccl25 protein_coding protein_coding MGP_BALBcJ_T0088092.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1314491 1343191 + MGP_BALBcJ_P0088092 Ccl25 protein_coding protein_coding MGP_BALBcJ_T0088093.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1314496 1322539 + Ccl25 protein_coding processed_transcript MGP_BALBcJ_T0088094.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1338684 1349454 + MGP_BALBcJ_P0088094 Ccl25 protein_coding protein_coding MGP_BALBcJ_T0088095.1 MGP_BALBcJ_G0033315.1 mouse_genomes_project 8 1338684 1347421 + MGP_BALBcJ_P0088095 Ccl25 protein_coding protein_coding MGP_BALBcJ_T0009177.1 MGP_BALBcJ_G0007371.1 mouse_genomes_project 8 120370345 120380654 + Gm26812 lincRNA lincRNA MGP_BALBcJ_T0009178.1 MGP_BALBcJ_G0007371.1 mouse_genomes_project 8 120372035 120380373 + Gm26812 lincRNA lincRNA MGP_BALBcJ_T0089103.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67408501 67421662 + MGP_BALBcJ_P0089103 Gmip protein_coding protein_coding MGP_BALBcJ_T0089104.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67408512 67418774 + MGP_BALBcJ_P0089104 Gmip protein_coding protein_coding MGP_BALBcJ_T0089105.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67410311 67413665 + Gmip protein_coding processed_transcript MGP_BALBcJ_T0089106.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67410467 67411444 + Gmip protein_coding processed_transcript MGP_BALBcJ_T0089107.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67413075 67413913 + Gmip protein_coding retained_intron MGP_BALBcJ_T0089108.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67413696 67416044 + Gmip protein_coding processed_transcript MGP_BALBcJ_T0089109.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67416507 67417394 + Gmip protein_coding retained_intron MGP_BALBcJ_T0089110.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67417627 67418779 + MGP_BALBcJ_P0089110 Gmip protein_coding protein_coding MGP_BALBcJ_T0089111.1 MGP_BALBcJ_G0033656.1 mouse_genomes_project 8 67417863 67421119 + Gmip protein_coding processed_transcript MGP_BALBcJ_T0090022.1 MGP_BALBcJ_G0033929.1 mouse_genomes_project 8 91908339 91910167 + MGP_BALBcJ_P0090022 Mt4 protein_coding protein_coding MGP_BALBcJ_T0088566.1 MGP_BALBcJ_G0033484.1 mouse_genomes_project 8 24790443 24801765 - MGP_BALBcJ_P0088566 Chrna6 protein_coding protein_coding MGP_BALBcJ_T0005320.1 MGP_BALBcJ_G0004511.1 mouse_genomes_project 8 20121751 20125542 + 1700041G16Rik antisense antisense MGP_BALBcJ_T0005321.1 MGP_BALBcJ_G0004511.1 mouse_genomes_project 8 20124283 20124741 + 1700041G16Rik antisense antisense MGP_BALBcJ_T0088750.1 MGP_BALBcJ_G0033554.1 mouse_genomes_project 8 42844852 42866981 - MGP_BALBcJ_P0088750 Fam149a protein_coding protein_coding MGP_BALBcJ_T0088751.1 MGP_BALBcJ_G0033554.1 mouse_genomes_project 8 42844860 42890633 - MGP_BALBcJ_P0088751 Fam149a protein_coding protein_coding MGP_BALBcJ_T0088752.1 MGP_BALBcJ_G0033554.1 mouse_genomes_project 8 42846894 42866878 - MGP_BALBcJ_P0088752 Fam149a protein_coding protein_coding MGP_BALBcJ_T0088704.1 MGP_BALBcJ_G0033536.1 mouse_genomes_project 8 38362557 38376084 + Pdgfrl protein_coding retained_intron MGP_BALBcJ_T0088705.1 MGP_BALBcJ_G0033536.1 mouse_genomes_project 8 38362573 38421523 + MGP_BALBcJ_P0088705 Pdgfrl protein_coding protein_coding MGP_BALBcJ_T0005313.1 MGP_BALBcJ_G0004505.1 mouse_genomes_project 8 10161426 10168090 + Gm17023 antisense antisense MGP_BALBcJ_T0101388.1 MGP_BALBcJ_G0039424.1 mouse_genomes_project 8 39987197 39987261 - Gm23531 snoRNA snoRNA MGP_BALBcJ_T0089376.1 MGP_BALBcJ_G0033735.1 mouse_genomes_project 8 69238499 69242596 + MGP_BALBcJ_P0089376 Pgls protein_coding protein_coding MGP_BALBcJ_T0089377.1 MGP_BALBcJ_G0033735.1 mouse_genomes_project 8 69238504 69249613 + MGP_BALBcJ_P0089377 Pgls protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089378.1 MGP_BALBcJ_G0033735.1 mouse_genomes_project 8 69238531 69241993 + Pgls protein_coding retained_intron MGP_BALBcJ_T0089379.1 MGP_BALBcJ_G0033735.1 mouse_genomes_project 8 69238557 69241433 + MGP_BALBcJ_P0089379 Pgls protein_coding protein_coding MGP_BALBcJ_T0089802.1 MGP_BALBcJ_G0033863.1 mouse_genomes_project 8 82702245 82709406 - MGP_BALBcJ_P0089802 Asna1 protein_coding protein_coding MGP_BALBcJ_T0009133.1 MGP_BALBcJ_G0007341.1 mouse_genomes_project 8 89785412 89799373 + Gm28516 lincRNA lincRNA MGP_BALBcJ_T0088256.1 MGP_BALBcJ_G0033368.1 mouse_genomes_project 8 10871155 10883901 + MGP_BALBcJ_P0088256 Upf3a protein_coding protein_coding MGP_BALBcJ_T0088108.1 MGP_BALBcJ_G0033319.1 mouse_genomes_project 8 1728019 1768935 - MGP_BALBcJ_P0088108 Shcbp1 protein_coding protein_coding MGP_BALBcJ_T0015947.1 MGP_BALBcJ_G0014044.1 mouse_genomes_project 8 43774961 43775903 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090287.1 MGP_BALBcJ_G0034031.1 mouse_genomes_project 8 103885021 103886975 + MGP_BALBcJ_P0090287 4933405L10Rik protein_coding protein_coding MGP_BALBcJ_T0090293.1 MGP_BALBcJ_G0034035.1 mouse_genomes_project 8 104024425 104031794 - MGP_BALBcJ_P0090293 Cenpt protein_coding protein_coding MGP_BALBcJ_T0011695.1 MGP_BALBcJ_G0009820.1 mouse_genomes_project 8 23028050 23028372 + Gm23094 misc_RNA misc_RNA MGP_BALBcJ_T0088348.1 MGP_BALBcJ_G0033408.1 mouse_genomes_project 8 19138713 19145204 + MGP_BALBcJ_P0088348 Defb50 protein_coding protein_coding MGP_BALBcJ_T0089085.1 MGP_BALBcJ_G0033646.1 mouse_genomes_project 8 66853741 66883189 + MGP_BALBcJ_P0089085 D130040H23Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0089086.1 MGP_BALBcJ_G0033646.1 mouse_genomes_project 8 66880895 66883271 + MGP_BALBcJ_P0089086 D130040H23Rik protein_coding protein_coding MGP_BALBcJ_T0009046.1 MGP_BALBcJ_G0007274.1 mouse_genomes_project 8 8067607 8115493 + 9530052E02Rik lincRNA lincRNA MGP_BALBcJ_T0009047.1 MGP_BALBcJ_G0007274.1 mouse_genomes_project 8 8110534 8115498 + 9530052E02Rik lincRNA lincRNA MGP_BALBcJ_T0011708.1 MGP_BALBcJ_G0009833.1 mouse_genomes_project 8 104259510 104259770 - Gm27956 misc_RNA misc_RNA MGP_BALBcJ_T0010930.1 MGP_BALBcJ_G0009055.1 mouse_genomes_project 8 10274929 10274997 - Mir1968 miRNA miRNA MGP_BALBcJ_T0005332.1 MGP_BALBcJ_G0004520.1 mouse_genomes_project 8 43673007 43676498 + Gm15634 antisense antisense MGP_BALBcJ_T0089341.1 MGP_BALBcJ_G0033722.1 mouse_genomes_project 8 69034584 69042513 + MGP_BALBcJ_P0089341 Babam1 protein_coding protein_coding MGP_BALBcJ_T0088734.1 MGP_BALBcJ_G0033546.1 mouse_genomes_project 8 41016934 41084022 - MGP_BALBcJ_P0088734 protein_coding protein_coding MGP_BALBcJ_T0010996.1 MGP_BALBcJ_G0009121.1 mouse_genomes_project 8 109762972 109763095 + Mir1957b miRNA miRNA MGP_BALBcJ_T0090307.1 MGP_BALBcJ_G0034042.1 mouse_genomes_project 8 104116297 104118962 - MGP_BALBcJ_P0090307 Psmb10 protein_coding protein_coding MGP_BALBcJ_T0009080.1 MGP_BALBcJ_G0007300.1 mouse_genomes_project 8 44254014 44264161 - lincRNA lincRNA MGP_BALBcJ_T0090051.1 MGP_BALBcJ_G0033941.1 mouse_genomes_project 8 92447722 92469159 - MGP_BALBcJ_P0090051 Pllp protein_coding protein_coding MGP_BALBcJ_T0005354.1 MGP_BALBcJ_G0004539.1 mouse_genomes_project 8 92158138 92165878 - Gm15890 antisense antisense MGP_BALBcJ_T0011701.1 MGP_BALBcJ_G0009826.1 mouse_genomes_project 8 62931052 62931195 + Gm25403 misc_RNA misc_RNA MGP_BALBcJ_T0090953.1 MGP_BALBcJ_G0034241.1 mouse_genomes_project 8 122593544 122621493 + MGP_BALBcJ_P0090953 Urb2 protein_coding unknown_likely_coding MGP_BALBcJ_T0090954.1 MGP_BALBcJ_G0034241.1 mouse_genomes_project 8 122593565 122621494 + MGP_BALBcJ_P0090954 Urb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090955.1 MGP_BALBcJ_G0034241.1 mouse_genomes_project 8 122595422 122621495 + MGP_BALBcJ_P0090955 Urb2 protein_coding protein_coding MGP_BALBcJ_T0098653.1 MGP_BALBcJ_G0036707.1 mouse_genomes_project 8 2069775 2069894 - n-R5s93 rRNA rRNA MGP_BALBcJ_T0089825.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758980 82764588 - Wdr83 protein_coding retained_intron MGP_BALBcJ_T0089826.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758980 82764517 - Wdr83 protein_coding retained_intron MGP_BALBcJ_T0089827.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758980 82764631 - MGP_BALBcJ_P0089827 Wdr83 protein_coding protein_coding MGP_BALBcJ_T0089828.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758981 82763800 - Wdr83 protein_coding retained_intron MGP_BALBcJ_T0089829.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758982 82760053 - MGP_BALBcJ_P0089829 Wdr83 protein_coding protein_coding MGP_BALBcJ_T0089830.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758983 82760237 - Wdr83 protein_coding retained_intron MGP_BALBcJ_T0089831.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82758997 82765188 - Wdr83 protein_coding retained_intron MGP_BALBcJ_T0089832.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82759773 82764558 - MGP_BALBcJ_P0089832 Wdr83 protein_coding protein_coding MGP_BALBcJ_T0089833.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82760069 82764559 - MGP_BALBcJ_P0089833 Wdr83 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089834.1 MGP_BALBcJ_G0033869.1 mouse_genomes_project 8 82763579 82764554 - Wdr83 protein_coding retained_intron MGP_BALBcJ_T0015968.1 MGP_BALBcJ_G0014065.1 mouse_genomes_project 8 79424977 79425328 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101415.1 MGP_BALBcJ_G0039451.1 mouse_genomes_project 8 88815830 88815962 - Gm22428 snoRNA snoRNA MGP_BALBcJ_T0015965.1 MGP_BALBcJ_G0014062.1 mouse_genomes_project 8 78533698 78534692 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090451.1 MGP_BALBcJ_G0034098.1 mouse_genomes_project 8 108899339 108999779 + MGP_BALBcJ_P0090451 Vac14 protein_coding protein_coding MGP_BALBcJ_T0101384.1 MGP_BALBcJ_G0039420.1 mouse_genomes_project 8 28525359 28525463 - Snord13 snoRNA snoRNA MGP_BALBcJ_T0101410.1 MGP_BALBcJ_G0039446.1 mouse_genomes_project 8 80036770 80036906 + Gm25138 snoRNA snoRNA MGP_BALBcJ_T0090443.1 MGP_BALBcJ_G0034092.1 mouse_genomes_project 8 108346674 108357342 + MGP_BALBcJ_P0090443 Zfp612 protein_coding protein_coding MGP_BALBcJ_T0100113.1 MGP_BALBcJ_G0038149.1 mouse_genomes_project 8 20138642 20138760 - Gm24735 snRNA snRNA MGP_BALBcJ_T0009131.1 MGP_BALBcJ_G0007339.1 mouse_genomes_project 8 89627797 89635006 + Gm28511 lincRNA lincRNA MGP_BALBcJ_T0088425.1 MGP_BALBcJ_G0033440.1 mouse_genomes_project 8 20549189 20560445 - MGP_BALBcJ_P0088425 Gins4 protein_coding protein_coding MGP_BALBcJ_T0088239.1 MGP_BALBcJ_G0033363.1 mouse_genomes_project 8 10555537 10584705 - MGP_BALBcJ_P0088239 Gas6 protein_coding protein_coding MGP_BALBcJ_T0009163.1 MGP_BALBcJ_G0007360.1 mouse_genomes_project 8 119095785 119096511 + Gm26739 lincRNA lincRNA MGP_BALBcJ_T0018439.1 MGP_BALBcJ_G0015657.1 mouse_genomes_project 8 75184873 75259147 + processed_transcript processed_transcript MGP_BALBcJ_T0018440.1 MGP_BALBcJ_G0015657.1 mouse_genomes_project 8 75231082 75346775 + processed_transcript processed_transcript MGP_BALBcJ_T0018441.1 MGP_BALBcJ_G0015657.1 mouse_genomes_project 8 75342163 75346003 + processed_transcript processed_transcript MGP_BALBcJ_T0005342.1 MGP_BALBcJ_G0004529.1 mouse_genomes_project 8 65511329 65532607 + Gm15991 antisense antisense MGP_BALBcJ_T0089078.1 MGP_BALBcJ_G0033644.1 mouse_genomes_project 8 66706792 66763227 - MGP_BALBcJ_P0089078 Lzts1 protein_coding protein_coding MGP_BALBcJ_T0089079.1 MGP_BALBcJ_G0033644.1 mouse_genomes_project 8 66709691 66715149 - MGP_BALBcJ_P0089079 Lzts1 protein_coding protein_coding MGP_BALBcJ_T0089080.1 MGP_BALBcJ_G0033644.1 mouse_genomes_project 8 66744639 66763217 - Lzts1 protein_coding processed_transcript MGP_BALBcJ_T0089081.1 MGP_BALBcJ_G0033644.1 mouse_genomes_project 8 66761018 66763207 - Lzts1 protein_coding processed_transcript MGP_BALBcJ_T0089082.1 MGP_BALBcJ_G0033644.1 mouse_genomes_project 8 66762713 66763191 - Lzts1 protein_coding retained_intron MGP_BALBcJ_T0088908.1 MGP_BALBcJ_G0033596.1 mouse_genomes_project 8 53612346 53715726 + Glra3 protein_coding processed_transcript MGP_BALBcJ_T0088909.1 MGP_BALBcJ_G0033596.1 mouse_genomes_project 8 53612395 53795724 + MGP_BALBcJ_P0088909 Glra3 protein_coding protein_coding MGP_BALBcJ_T0088426.1 MGP_BALBcJ_G0033441.1 mouse_genomes_project 8 20564170 20580866 - MGP_BALBcJ_P0088426 Golga7 protein_coding protein_coding MGP_BALBcJ_T0088427.1 MGP_BALBcJ_G0033441.1 mouse_genomes_project 8 20566211 20569005 - Golga7 protein_coding retained_intron MGP_BALBcJ_T0090238.1 MGP_BALBcJ_G0034012.1 mouse_genomes_project 8 103460354 103465382 + MGP_BALBcJ_P0090238 Elmo3 protein_coding protein_coding MGP_BALBcJ_T0089502.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74462165 74471713 + MGP_BALBcJ_P0089502 Nr3c2 protein_coding protein_coding MGP_BALBcJ_T0089503.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74462495 74814890 + MGP_BALBcJ_P0089503 Nr3c2 protein_coding protein_coding MGP_BALBcJ_T0089504.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74465010 74814885 + MGP_BALBcJ_P0089504 Nr3c2 protein_coding protein_coding MGP_BALBcJ_T0089505.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74465010 74812874 + MGP_BALBcJ_P0089505 Nr3c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089506.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74465069 74471956 + MGP_BALBcJ_P0089506 Nr3c2 protein_coding protein_coding MGP_BALBcJ_T0089507.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74465198 74813541 + MGP_BALBcJ_P0089507 Nr3c2 protein_coding protein_coding MGP_BALBcJ_T0089508.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74471571 74812408 + MGP_BALBcJ_P0089508 Nr3c2 protein_coding protein_coding MGP_BALBcJ_T0089509.1 MGP_BALBcJ_G0033775.1 mouse_genomes_project 8 74701929 74754527 + Nr3c2 protein_coding processed_transcript MGP_BALBcJ_T0088597.1 MGP_BALBcJ_G0033502.1 mouse_genomes_project 8 31003740 31028695 + Gsr protein_coding processed_transcript MGP_BALBcJ_T0088598.1 MGP_BALBcJ_G0033502.1 mouse_genomes_project 8 31005164 31052945 + MGP_BALBcJ_P0088598 Gsr protein_coding protein_coding MGP_BALBcJ_T0088599.1 MGP_BALBcJ_G0033502.1 mouse_genomes_project 8 31023696 31039929 + Gsr protein_coding processed_transcript MGP_BALBcJ_T0101400.1 MGP_BALBcJ_G0039436.1 mouse_genomes_project 8 61443345 61443476 + Gm24580 snoRNA snoRNA MGP_BALBcJ_T0010997.1 MGP_BALBcJ_G0009122.1 mouse_genomes_project 8 110009827 110009901 - Mir7076 miRNA miRNA MGP_BALBcJ_T0089581.1 MGP_BALBcJ_G0033800.1 mouse_genomes_project 8 80396495 80407070 - MGP_BALBcJ_P0089581 Zfp330 protein_coding protein_coding MGP_BALBcJ_T0088156.1 MGP_BALBcJ_G0033342.1 mouse_genomes_project 8 9353133 9354972 + MGP_BALBcJ_P0088156 A230072I06Rik protein_coding protein_coding MGP_BALBcJ_T0010953.1 MGP_BALBcJ_G0009078.1 mouse_genomes_project 8 69279401 69279461 - Mir6769b miRNA miRNA MGP_BALBcJ_T0101385.1 MGP_BALBcJ_G0039421.1 mouse_genomes_project 8 31046036 31046180 + Gm23123 snoRNA snoRNA MGP_BALBcJ_T0089605.1 MGP_BALBcJ_G0033812.1 mouse_genomes_project 8 81289257 81301617 + MGP_BALBcJ_P0089605 Gipc1 protein_coding protein_coding MGP_BALBcJ_T0098402.1 MGP_BALBcJ_G0036456.1 mouse_genomes_project 8 101844221 101865268 - pseudogene pseudogene MGP_BALBcJ_T0089243.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68122959 68150890 - MGP_BALBcJ_P0089243 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089244.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68125105 68160385 - MGP_BALBcJ_P0089244 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089245.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68141220 68150907 - MGP_BALBcJ_P0089245 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089246.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68141428 68151006 - MGP_BALBcJ_P0089246 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089247.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68141951 68150907 - MGP_BALBcJ_P0089247 Kxd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089248.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68142514 68160385 - MGP_BALBcJ_P0089248 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089249.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68143220 68150817 - MGP_BALBcJ_P0089249 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089250.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68146242 68160212 - MGP_BALBcJ_P0089250 Kxd1 protein_coding protein_coding MGP_BALBcJ_T0089251.1 MGP_BALBcJ_G0033689.1 mouse_genomes_project 8 68146868 68150831 - Kxd1 protein_coding retained_intron MGP_BALBcJ_T0089528.1 MGP_BALBcJ_G0033781.1 mouse_genomes_project 8 76003274 76006910 - MGP_BALBcJ_P0089528 Pou4f2 protein_coding protein_coding MGP_BALBcJ_T0100146.1 MGP_BALBcJ_G0038182.1 mouse_genomes_project 8 100488390 100488453 + Gm24602 snRNA snRNA MGP_BALBcJ_T0090058.1 MGP_BALBcJ_G0033944.1 mouse_genomes_project 8 92579037 92580620 + MGP_BALBcJ_P0090058 Ccl17 protein_coding protein_coding MGP_BALBcJ_T0090514.1 MGP_BALBcJ_G0034113.1 mouse_genomes_project 8 109658281 109679665 - Fa2h protein_coding processed_transcript MGP_BALBcJ_T0090515.1 MGP_BALBcJ_G0034113.1 mouse_genomes_project 8 109658287 109708807 - MGP_BALBcJ_P0090515 Fa2h protein_coding protein_coding MGP_BALBcJ_T0090516.1 MGP_BALBcJ_G0034113.1 mouse_genomes_project 8 109658912 109661205 - Fa2h protein_coding processed_transcript MGP_BALBcJ_T0090517.1 MGP_BALBcJ_G0034113.1 mouse_genomes_project 8 109660617 109708801 - Fa2h protein_coding retained_intron MGP_BALBcJ_T0009044.1 MGP_BALBcJ_G0007272.1 mouse_genomes_project 8 4392399 4454475 + Gm17215 lincRNA lincRNA MGP_BALBcJ_T0010994.1 MGP_BALBcJ_G0009119.1 mouse_genomes_project 8 109331324 109331401 - Gm24103 miRNA miRNA MGP_BALBcJ_T0090941.1 MGP_BALBcJ_G0034233.1 mouse_genomes_project 8 122211339 122213721 + Rhou protein_coding retained_intron MGP_BALBcJ_T0090942.1 MGP_BALBcJ_G0034233.1 mouse_genomes_project 8 122211339 122221987 + MGP_BALBcJ_P0090942 Rhou protein_coding protein_coding MGP_BALBcJ_T0088733.1 MGP_BALBcJ_G0033545.1 mouse_genomes_project 8 41016934 41035454 - MGP_BALBcJ_P0088733 Adam26a protein_coding protein_coding MGP_BALBcJ_T0002338.1 MGP_BALBcJ_G0002248.1 mouse_genomes_project 8 119655694 119656372 + TEC TEC MGP_BALBcJ_T0088325.1 MGP_BALBcJ_G0033388.1 mouse_genomes_project 8 16002155 16005470 - MGP_BALBcJ_P0088325 Defb40 protein_coding protein_coding MGP_BALBcJ_T0100125.1 MGP_BALBcJ_G0038161.1 mouse_genomes_project 8 51108695 51108757 + Gm27964 snRNA snRNA MGP_BALBcJ_T0010949.1 MGP_BALBcJ_G0009074.1 mouse_genomes_project 8 67719021 67719084 - Mir7066 miRNA miRNA MGP_BALBcJ_T0089983.1 MGP_BALBcJ_G0033919.1 mouse_genomes_project 8 90973523 91002243 - MGP_BALBcJ_P0089983 Ces1e protein_coding protein_coding MGP_BALBcJ_T0089984.1 MGP_BALBcJ_G0033919.1 mouse_genomes_project 8 90973709 91002242 - MGP_BALBcJ_P0089984 Ces1e protein_coding protein_coding MGP_BALBcJ_T0089985.1 MGP_BALBcJ_G0033919.1 mouse_genomes_project 8 90983002 90992191 - Ces1e protein_coding retained_intron MGP_BALBcJ_T0100116.1 MGP_BALBcJ_G0038152.1 mouse_genomes_project 8 25146018 25146121 - Gm24202 snRNA snRNA MGP_BALBcJ_T0090587.1 MGP_BALBcJ_G0034137.1 mouse_genomes_project 8 114923182 114934060 + MGP_BALBcJ_P0090587 Dynlrb2 protein_coding protein_coding MGP_BALBcJ_T0011691.1 MGP_BALBcJ_G0009816.1 mouse_genomes_project 8 4549050 4549249 + Gm27585 misc_RNA misc_RNA MGP_BALBcJ_T0090059.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92588615 92608322 - MGP_BALBcJ_P0090059 Ciapin1 protein_coding protein_coding MGP_BALBcJ_T0090060.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92591354 92595530 - MGP_BALBcJ_P0090060 Ciapin1 protein_coding protein_coding MGP_BALBcJ_T0090061.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92591728 92592990 - Ciapin1 protein_coding retained_intron MGP_BALBcJ_T0090062.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92591814 92595536 - Ciapin1 protein_coding processed_transcript MGP_BALBcJ_T0090063.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92592504 92601194 - MGP_BALBcJ_P0090063 Ciapin1 protein_coding protein_coding MGP_BALBcJ_T0090064.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92593432 92595534 - Ciapin1 protein_coding retained_intron MGP_BALBcJ_T0090065.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92594015 92600525 - Ciapin1 protein_coding processed_transcript MGP_BALBcJ_T0090066.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92596889 92608229 - MGP_BALBcJ_P0090066 Ciapin1 protein_coding protein_coding MGP_BALBcJ_T0090067.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92600476 92608225 - Ciapin1 protein_coding processed_transcript MGP_BALBcJ_T0090068.1 MGP_BALBcJ_G0033945.1 mouse_genomes_project 8 92601187 92608006 - Ciapin1 protein_coding processed_transcript MGP_BALBcJ_T0018448.1 MGP_BALBcJ_G0015661.1 mouse_genomes_project 8 93579817 93594857 + 4930513N10Rik processed_transcript processed_transcript MGP_BALBcJ_T0018449.1 MGP_BALBcJ_G0015661.1 mouse_genomes_project 8 93579960 93583188 + 4930513N10Rik processed_transcript processed_transcript MGP_BALBcJ_T0018450.1 MGP_BALBcJ_G0015661.1 mouse_genomes_project 8 93582020 93594826 + 4930513N10Rik processed_transcript processed_transcript MGP_BALBcJ_T0088665.1 MGP_BALBcJ_G0033524.1 mouse_genomes_project 8 36446571 36594787 + MGP_BALBcJ_P0088665 Tusc3 protein_coding protein_coding MGP_BALBcJ_T0015963.1 MGP_BALBcJ_G0014060.1 mouse_genomes_project 8 77313230 77314173 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089727.1 MGP_BALBcJ_G0033843.1 mouse_genomes_project 8 82364988 82373352 - Nfix protein_coding processed_transcript MGP_BALBcJ_T0089729.1 MGP_BALBcJ_G0033843.1 mouse_genomes_project 8 82369824 82372850 - Nfix protein_coding processed_transcript MGP_BALBcJ_T0089730.1 MGP_BALBcJ_G0033843.1 mouse_genomes_project 8 82369825 82438380 - MGP_BALBcJ_P0089730 Nfix protein_coding protein_coding MGP_BALBcJ_T0089731.1 MGP_BALBcJ_G0033843.1 mouse_genomes_project 8 82373747 82464879 - MGP_BALBcJ_P0089731 Nfix protein_coding protein_coding MGP_BALBcJ_T0089732.1 MGP_BALBcJ_G0033843.1 mouse_genomes_project 8 82373768 82379198 - Nfix protein_coding retained_intron MGP_BALBcJ_T0089733.1 MGP_BALBcJ_G0033843.1 mouse_genomes_project 8 82378924 82464763 - MGP_BALBcJ_P0089733 Nfix protein_coding protein_coding MGP_BALBcJ_T0005319.1 MGP_BALBcJ_G0004510.1 mouse_genomes_project 8 20002450 20011832 + Gm15346 antisense antisense MGP_BALBcJ_T0088936.1 MGP_BALBcJ_G0033605.1 mouse_genomes_project 8 56512591 56515138 + MGP_BALBcJ_P0088936 BC030500 protein_coding protein_coding MGP_BALBcJ_T0088937.1 MGP_BALBcJ_G0033605.1 mouse_genomes_project 8 56513093 56514033 + MGP_BALBcJ_P0088937 BC030500 protein_coding protein_coding MGP_BALBcJ_T0089801.1 MGP_BALBcJ_G0033862.1 mouse_genomes_project 8 82689970 82698875 - MGP_BALBcJ_P0089801 Best2 protein_coding protein_coding MGP_BALBcJ_T0015919.1 MGP_BALBcJ_G0014016.1 mouse_genomes_project 8 10171865 10172787 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090236.1 MGP_BALBcJ_G0034010.1 mouse_genomes_project 8 103444177 103450352 - MGP_BALBcJ_P0090236 Exoc3l protein_coding protein_coding MGP_BALBcJ_T0090085.1 MGP_BALBcJ_G0033951.1 mouse_genomes_project 8 92749696 92787742 + MGP_BALBcJ_P0090085 Adgrg1 protein_coding protein_coding MGP_BALBcJ_T0090086.1 MGP_BALBcJ_G0033951.1 mouse_genomes_project 8 92757944 92787742 + MGP_BALBcJ_P0090086 Adgrg1 protein_coding protein_coding MGP_BALBcJ_T0088590.1 MGP_BALBcJ_G0033498.1 mouse_genomes_project 8 30785029 30785871 + MGP_BALBcJ_P0088590 5930422O12Rik protein_coding protein_coding MGP_BALBcJ_T0089225.1 MGP_BALBcJ_G0033684.1 mouse_genomes_project 8 68065697 68091638 - MGP_BALBcJ_P0089225 Klhl26 protein_coding protein_coding MGP_BALBcJ_T0089226.1 MGP_BALBcJ_G0033684.1 mouse_genomes_project 8 68065697 68091638 - MGP_BALBcJ_P0089226 Klhl26 protein_coding protein_coding MGP_BALBcJ_T0089968.1 MGP_BALBcJ_G0033912.1 mouse_genomes_project 8 90613716 90678951 + MGP_BALBcJ_P0089968 Lpcat2 protein_coding protein_coding MGP_BALBcJ_T0089969.1 MGP_BALBcJ_G0033912.1 mouse_genomes_project 8 90613846 90628822 + Lpcat2 protein_coding processed_transcript MGP_BALBcJ_T0089971.1 MGP_BALBcJ_G0033912.1 mouse_genomes_project 8 90665882 90677712 + Lpcat2 protein_coding processed_transcript MGP_BALBcJ_T0089192.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67898106 67901642 + MGP_BALBcJ_P0089192 Homer3 protein_coding protein_coding MGP_BALBcJ_T0089193.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67898106 67909454 + MGP_BALBcJ_P0089193 Homer3 protein_coding protein_coding MGP_BALBcJ_T0089194.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67898278 67909454 + MGP_BALBcJ_P0089194 Homer3 protein_coding protein_coding MGP_BALBcJ_T0089195.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67898313 67901414 + Homer3 protein_coding retained_intron MGP_BALBcJ_T0089196.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67900356 67909446 + MGP_BALBcJ_P0089196 Homer3 protein_coding protein_coding MGP_BALBcJ_T0089197.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67901042 67906833 + Homer3 protein_coding retained_intron MGP_BALBcJ_T0089198.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67904258 67906698 + Homer3 protein_coding retained_intron MGP_BALBcJ_T0089199.1 MGP_BALBcJ_G0033677.1 mouse_genomes_project 8 67906169 67908563 + MGP_BALBcJ_P0089199 Homer3 protein_coding protein_coding MGP_BALBcJ_T0088999.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62290318 62305950 - MGP_BALBcJ_P0088999 Msmo1 protein_coding protein_coding MGP_BALBcJ_T0089000.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62290388 62305739 - Msmo1 protein_coding processed_transcript MGP_BALBcJ_T0089001.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62290406 62305736 - Msmo1 protein_coding retained_intron MGP_BALBcJ_T0089002.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62290804 62294163 - Msmo1 protein_coding processed_transcript MGP_BALBcJ_T0089003.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62295942 62303250 - MGP_BALBcJ_P0089003 Msmo1 protein_coding protein_coding MGP_BALBcJ_T0089004.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62297265 62305706 - Msmo1 protein_coding retained_intron MGP_BALBcJ_T0089005.1 MGP_BALBcJ_G0033621.1 mouse_genomes_project 8 62299919 62305706 - MGP_BALBcJ_P0089005 Msmo1 protein_coding protein_coding MGP_BALBcJ_T0090885.1 MGP_BALBcJ_G0034221.1 mouse_genomes_project 8 121789848 121793821 - MGP_BALBcJ_P0090885 Spata2l protein_coding protein_coding MGP_BALBcJ_T0090886.1 MGP_BALBcJ_G0034221.1 mouse_genomes_project 8 121789851 121793824 - MGP_BALBcJ_P0090886 Spata2l protein_coding protein_coding MGP_BALBcJ_T0015931.1 MGP_BALBcJ_G0014028.1 mouse_genomes_project 8 19132663 19133104 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088237.1 MGP_BALBcJ_G0033362.1 mouse_genomes_project 8 10525623 10551616 + MGP_BALBcJ_P0088237 Tmem255b protein_coding protein_coding MGP_BALBcJ_T0088238.1 MGP_BALBcJ_G0033362.1 mouse_genomes_project 8 10525623 10551616 + MGP_BALBcJ_P0088238 Tmem255b protein_coding protein_coding MGP_BALBcJ_T0090115.1 MGP_BALBcJ_G0033964.1 mouse_genomes_project 8 93328225 93345864 - MGP_BALBcJ_P0090115 Prss54 protein_coding protein_coding MGP_BALBcJ_T0090116.1 MGP_BALBcJ_G0033964.1 mouse_genomes_project 8 93328384 93345606 - MGP_BALBcJ_P0090116 Prss54 protein_coding protein_coding MGP_BALBcJ_T0090280.1 MGP_BALBcJ_G0034027.1 mouse_genomes_project 8 103863009 103870383 + MGP_BALBcJ_P0090280 Rltpr protein_coding unknown_likely_coding MGP_BALBcJ_T0090281.1 MGP_BALBcJ_G0034027.1 mouse_genomes_project 8 103867641 103874914 + MGP_BALBcJ_P0090281 Rltpr protein_coding protein_coding MGP_BALBcJ_T0090282.1 MGP_BALBcJ_G0034027.1 mouse_genomes_project 8 103870883 103874939 + MGP_BALBcJ_P0090282 Rltpr protein_coding unknown_likely_coding MGP_BALBcJ_T0090363.1 MGP_BALBcJ_G0034065.1 mouse_genomes_project 8 105250347 105266181 + MGP_BALBcJ_P0090363 Vps4a protein_coding protein_coding MGP_BALBcJ_T0090364.1 MGP_BALBcJ_G0034065.1 mouse_genomes_project 8 105259439 105263107 + Vps4a protein_coding retained_intron MGP_BALBcJ_T0090365.1 MGP_BALBcJ_G0034065.1 mouse_genomes_project 8 105262674 105263526 + Vps4a protein_coding retained_intron MGP_BALBcJ_T0088570.1 MGP_BALBcJ_G0033488.1 mouse_genomes_project 8 28461057 28469108 + MGP_BALBcJ_P0088570 Dusp26 protein_coding protein_coding MGP_BALBcJ_T0088571.1 MGP_BALBcJ_G0033488.1 mouse_genomes_project 8 28461222 28469107 + MGP_BALBcJ_P0088571 Dusp26 protein_coding protein_coding MGP_BALBcJ_T0088572.1 MGP_BALBcJ_G0033488.1 mouse_genomes_project 8 28461388 28464268 + Dusp26 protein_coding retained_intron MGP_BALBcJ_T0088573.1 MGP_BALBcJ_G0033488.1 mouse_genomes_project 8 28463685 28469107 + MGP_BALBcJ_P0088573 Dusp26 protein_coding protein_coding MGP_BALBcJ_T0088574.1 MGP_BALBcJ_G0033488.1 mouse_genomes_project 8 28466033 28468650 + Dusp26 protein_coding processed_transcript MGP_BALBcJ_T0089303.1 MGP_BALBcJ_G0033714.1 mouse_genomes_project 8 68545541 68557052 + MGP_BALBcJ_P0089303 Map1s protein_coding protein_coding MGP_BALBcJ_T0088078.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1247506 1263956 - Timm44 protein_coding retained_intron MGP_BALBcJ_T0088079.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1247506 1263984 - MGP_BALBcJ_P0088079 Timm44 protein_coding protein_coding MGP_BALBcJ_T0088080.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1247524 1263942 - MGP_BALBcJ_P0088080 Timm44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088081.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1247759 1248511 - Timm44 protein_coding retained_intron MGP_BALBcJ_T0088082.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1247875 1254792 - Timm44 protein_coding retained_intron MGP_BALBcJ_T0088083.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1253859 1254729 - Timm44 protein_coding retained_intron MGP_BALBcJ_T0088084.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1254040 1255409 - Timm44 protein_coding retained_intron MGP_BALBcJ_T0088085.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1255090 1263953 - Timm44 protein_coding processed_transcript MGP_BALBcJ_T0088086.1 MGP_BALBcJ_G0033313.1 mouse_genomes_project 8 1255148 1263944 - Timm44 protein_coding retained_intron MGP_BALBcJ_T0089599.1 MGP_BALBcJ_G0033809.1 mouse_genomes_project 8 81198273 81203252 + MGP_BALBcJ_P0089599 Ndufb7 protein_coding protein_coding MGP_BALBcJ_T0089600.1 MGP_BALBcJ_G0033809.1 mouse_genomes_project 8 81198360 81203252 + Ndufb7 protein_coding retained_intron MGP_BALBcJ_T0088445.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22039138 22049842 - MGP_BALBcJ_P0088445 Adam3 protein_coding protein_coding MGP_BALBcJ_T0088446.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22039145 22087686 - MGP_BALBcJ_P0088446 Adam3 protein_coding protein_coding MGP_BALBcJ_T0088447.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22039214 22087632 - MGP_BALBcJ_P0088447 Adam3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088448.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22042673 22087622 - MGP_BALBcJ_P0088448 Adam3 protein_coding protein_coding MGP_BALBcJ_T0088449.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22069122 22087622 - MGP_BALBcJ_P0088449 Adam3 protein_coding protein_coding MGP_BALBcJ_T0088450.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22076856 22087619 - Adam3 protein_coding processed_transcript MGP_BALBcJ_T0088451.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22076930 22087634 - Adam3 protein_coding processed_transcript MGP_BALBcJ_T0088452.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22076931 22087659 - Adam3 protein_coding processed_transcript MGP_BALBcJ_T0088453.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22076970 22087622 - MGP_BALBcJ_P0088453 Adam3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088454.1 MGP_BALBcJ_G0033449.1 mouse_genomes_project 8 22076995 22087616 - MGP_BALBcJ_P0088454 Adam3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011707.1 MGP_BALBcJ_G0009832.1 mouse_genomes_project 8 103354415 103354504 + Gm24629 misc_RNA misc_RNA MGP_BALBcJ_T0088622.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430614 31435338 - Dctn6 protein_coding retained_intron MGP_BALBcJ_T0088623.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430617 31448040 - MGP_BALBcJ_P0088623 Dctn6 protein_coding protein_coding MGP_BALBcJ_T0088624.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430757 31447780 - MGP_BALBcJ_P0088624 Dctn6 protein_coding protein_coding MGP_BALBcJ_T0088625.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430772 31447058 - Dctn6 protein_coding processed_transcript MGP_BALBcJ_T0088626.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430790 31445413 - MGP_BALBcJ_P0088626 Dctn6 protein_coding protein_coding MGP_BALBcJ_T0088627.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430801 31433138 - Dctn6 protein_coding retained_intron MGP_BALBcJ_T0088628.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31430832 31447096 - MGP_BALBcJ_P0088628 Dctn6 protein_coding protein_coding MGP_BALBcJ_T0088629.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31432723 31437901 - Dctn6 protein_coding retained_intron MGP_BALBcJ_T0088630.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31434997 31447721 - Dctn6 protein_coding retained_intron MGP_BALBcJ_T0088631.1 MGP_BALBcJ_G0033506.1 mouse_genomes_project 8 31435211 31447707 - MGP_BALBcJ_P0088631 Dctn6 protein_coding protein_coding MGP_BALBcJ_T0089390.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69272753 69323714 - MGP_BALBcJ_P0089390 Unc13a protein_coding protein_coding MGP_BALBcJ_T0089391.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69277408 69323693 - MGP_BALBcJ_P0089391 Unc13a protein_coding protein_coding MGP_BALBcJ_T0089392.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69285304 69293321 - MGP_BALBcJ_P0089392 Unc13a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089393.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69285569 69294492 - Unc13a protein_coding retained_intron MGP_BALBcJ_T0089394.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69293383 69297853 - MGP_BALBcJ_P0089394 Unc13a protein_coding protein_coding MGP_BALBcJ_T0089395.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69303018 69323604 - MGP_BALBcJ_P0089395 Unc13a protein_coding unknown_likely_coding MGP_BALBcJ_T0089396.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69305525 69310411 - MGP_BALBcJ_P0089396 Unc13a protein_coding protein_coding MGP_BALBcJ_T0089397.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69312279 69323698 - Unc13a protein_coding retained_intron MGP_BALBcJ_T0089398.1 MGP_BALBcJ_G0033738.1 mouse_genomes_project 8 69312284 69320024 - Unc13a protein_coding retained_intron MGP_BALBcJ_T0011004.1 MGP_BALBcJ_G0009129.1 mouse_genomes_project 8 120499855 120499918 + Mir7237 miRNA miRNA MGP_BALBcJ_T0089371.1 MGP_BALBcJ_G0033731.1 mouse_genomes_project 8 69190186 69195073 + MGP_BALBcJ_P0089371 Mvb12a protein_coding protein_coding MGP_BALBcJ_T0015987.1 MGP_BALBcJ_G0014084.1 mouse_genomes_project 8 122419746 122420113 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088648.1 MGP_BALBcJ_G0033520.1 mouse_genomes_project 8 33840884 33896289 + MGP_BALBcJ_P0088648 6430573F11Rik protein_coding protein_coding MGP_BALBcJ_T0088649.1 MGP_BALBcJ_G0033520.1 mouse_genomes_project 8 33840910 33897650 + MGP_BALBcJ_P0088649 6430573F11Rik protein_coding protein_coding MGP_BALBcJ_T0088650.1 MGP_BALBcJ_G0033520.1 mouse_genomes_project 8 33841518 33894924 + MGP_BALBcJ_P0088650 6430573F11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088651.1 MGP_BALBcJ_G0033520.1 mouse_genomes_project 8 33872644 33896342 + MGP_BALBcJ_P0088651 6430573F11Rik protein_coding protein_coding MGP_BALBcJ_T0088652.1 MGP_BALBcJ_G0033520.1 mouse_genomes_project 8 33888986 33895926 + 6430573F11Rik protein_coding processed_transcript MGP_BALBcJ_T0089228.1 MGP_BALBcJ_G0033686.1 mouse_genomes_project 8 68107664 68118569 + MGP_BALBcJ_P0089228 Crlf1 protein_coding protein_coding MGP_BALBcJ_T0089229.1 MGP_BALBcJ_G0033686.1 mouse_genomes_project 8 68107867 68115424 + MGP_BALBcJ_P0089229 Crlf1 protein_coding protein_coding MGP_BALBcJ_T0089230.1 MGP_BALBcJ_G0033686.1 mouse_genomes_project 8 68115626 68118518 + MGP_BALBcJ_P0089230 Crlf1 protein_coding protein_coding MGP_BALBcJ_T0090107.1 MGP_BALBcJ_G0033958.1 mouse_genomes_project 8 93097318 93103135 - MGP_BALBcJ_P0090107 Zfp319 protein_coding protein_coding MGP_BALBcJ_T0009061.1 MGP_BALBcJ_G0007285.1 mouse_genomes_project 8 24522062 24529762 + lincRNA lincRNA MGP_BALBcJ_T0088455.1 MGP_BALBcJ_G0033450.1 mouse_genomes_project 8 22088926 22158699 - MGP_BALBcJ_P0088455 Adam5 protein_coding protein_coding MGP_BALBcJ_T0088456.1 MGP_BALBcJ_G0033450.1 mouse_genomes_project 8 22088926 22164753 - MGP_BALBcJ_P0088456 Adam5 protein_coding protein_coding MGP_BALBcJ_T0088457.1 MGP_BALBcJ_G0033450.1 mouse_genomes_project 8 22089035 22164679 - Adam5 protein_coding processed_transcript MGP_BALBcJ_T0088458.1 MGP_BALBcJ_G0033450.1 mouse_genomes_project 8 22096105 22165063 - MGP_BALBcJ_P0088458 Adam5 protein_coding protein_coding MGP_BALBcJ_T0009088.1 MGP_BALBcJ_G0007308.1 mouse_genomes_project 8 65652844 65674345 - lincRNA lincRNA MGP_BALBcJ_T0009089.1 MGP_BALBcJ_G0007308.1 mouse_genomes_project 8 65673382 65674559 - lincRNA lincRNA MGP_BALBcJ_T0100122.1 MGP_BALBcJ_G0038158.1 mouse_genomes_project 8 43792273 43792370 + Gm24669 snRNA snRNA MGP_BALBcJ_T0010959.1 MGP_BALBcJ_G0009084.1 mouse_genomes_project 8 81576646 81576789 - Gm44330 miRNA miRNA MGP_BALBcJ_T0088724.1 MGP_BALBcJ_G0033540.1 mouse_genomes_project 8 38769721 38802831 - MGP_BALBcJ_P0088724 Asah1 protein_coding protein_coding MGP_BALBcJ_T0088725.1 MGP_BALBcJ_G0033540.1 mouse_genomes_project 8 38770183 38779563 - Asah1 protein_coding retained_intron MGP_BALBcJ_T0088726.1 MGP_BALBcJ_G0033540.1 mouse_genomes_project 8 38770849 38773381 - Asah1 protein_coding retained_intron MGP_BALBcJ_T0088727.1 MGP_BALBcJ_G0033540.1 mouse_genomes_project 8 38775705 38802693 - MGP_BALBcJ_P0088727 Asah1 protein_coding protein_coding MGP_BALBcJ_T0088728.1 MGP_BALBcJ_G0033540.1 mouse_genomes_project 8 38783533 38802831 - MGP_BALBcJ_P0088728 Asah1 protein_coding protein_coding MGP_BALBcJ_T0090687.1 MGP_BALBcJ_G0034173.1 mouse_genomes_project 8 118654219 118665434 - MGP_BALBcJ_P0090687 Fam92b protein_coding protein_coding MGP_BALBcJ_T0090688.1 MGP_BALBcJ_G0034173.1 mouse_genomes_project 8 118655208 118665331 - Fam92b protein_coding retained_intron MGP_BALBcJ_T0090689.1 MGP_BALBcJ_G0034173.1 mouse_genomes_project 8 118659562 118665395 - MGP_BALBcJ_P0090689 Fam92b protein_coding protein_coding MGP_BALBcJ_T0090690.1 MGP_BALBcJ_G0034173.1 mouse_genomes_project 8 118662684 118665415 - Fam92b protein_coding retained_intron MGP_BALBcJ_T0088140.1 MGP_BALBcJ_G0033337.1 mouse_genomes_project 8 8619529 8627399 + MGP_BALBcJ_P0088140 Ing1 protein_coding protein_coding MGP_BALBcJ_T0089518.1 MGP_BALBcJ_G0033779.1 mouse_genomes_project 8 75234845 75300161 - MGP_BALBcJ_P0089518 Ednra protein_coding protein_coding MGP_BALBcJ_T0089519.1 MGP_BALBcJ_G0033779.1 mouse_genomes_project 8 75241508 75300189 - Ednra protein_coding retained_intron MGP_BALBcJ_T0088940.1 MGP_BALBcJ_G0033608.1 mouse_genomes_project 8 58205496 58249153 + MGP_BALBcJ_P0088940 Mfap3l protein_coding protein_coding MGP_BALBcJ_T0088941.1 MGP_BALBcJ_G0033608.1 mouse_genomes_project 8 58205529 58250949 + MGP_BALBcJ_P0088941 Mfap3l protein_coding protein_coding MGP_BALBcJ_T0088942.1 MGP_BALBcJ_G0033608.1 mouse_genomes_project 8 58229366 58246685 + MGP_BALBcJ_P0088942 Mfap3l protein_coding protein_coding MGP_BALBcJ_T0088943.1 MGP_BALBcJ_G0033608.1 mouse_genomes_project 8 58229802 58246581 + MGP_BALBcJ_P0088943 Mfap3l protein_coding protein_coding MGP_BALBcJ_T0088635.1 MGP_BALBcJ_G0033510.1 mouse_genomes_project 8 31672115 31672560 + MGP_BALBcJ_P0088635 protein_coding protein_coding MGP_BALBcJ_T0099021.1 MGP_BALBcJ_G0037063.1 mouse_genomes_project 8 83681242 83683643 + Hm629797 sense_intronic sense_intronic MGP_BALBcJ_T0101426.1 MGP_BALBcJ_G0039462.1 mouse_genomes_project 8 109734913 109735045 + Gm24793 snoRNA snoRNA MGP_BALBcJ_T0089497.1 MGP_BALBcJ_G0033772.1 mouse_genomes_project 8 72694944 72713881 + MGP_BALBcJ_P0089497 Mcm5 protein_coding protein_coding MGP_BALBcJ_T0088894.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52237439 52332647 - MGP_BALBcJ_P0088894 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088895.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52237617 52338356 - MGP_BALBcJ_P0088895 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088896.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52237997 52259929 - Wdr17 protein_coding retained_intron MGP_BALBcJ_T0088897.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52238006 52338336 - MGP_BALBcJ_P0088897 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088898.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52238175 52338313 - MGP_BALBcJ_P0088898 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088899.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52260535 52269591 - Wdr17 protein_coding retained_intron MGP_BALBcJ_T0088900.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52280599 52307228 - MGP_BALBcJ_P0088900 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088901.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52280643 52338318 - Wdr17 protein_coding processed_transcript MGP_BALBcJ_T0088902.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52304518 52338316 - MGP_BALBcJ_P0088902 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088903.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52304850 52338442 - Wdr17 protein_coding processed_transcript MGP_BALBcJ_T0088904.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52310409 52490790 - MGP_BALBcJ_P0088904 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088905.1 MGP_BALBcJ_G0033593.1 mouse_genomes_project 8 52313447 52324350 - MGP_BALBcJ_P0088905 Wdr17 protein_coding protein_coding MGP_BALBcJ_T0088872.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45766237 46002135 - MGP_BALBcJ_P0088872 Tenm3 protein_coding protein_coding MGP_BALBcJ_T0088873.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45768253 46404676 - MGP_BALBcJ_P0088873 Tenm3 protein_coding protein_coding MGP_BALBcJ_T0088874.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45768276 46233583 - MGP_BALBcJ_P0088874 Tenm3 protein_coding protein_coding MGP_BALBcJ_T0088875.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45816934 45841101 - Tenm3 protein_coding processed_transcript MGP_BALBcJ_T0088876.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45885103 46113621 - MGP_BALBcJ_P0088876 Tenm3 protein_coding protein_coding MGP_BALBcJ_T0088877.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45952717 46113967 - MGP_BALBcJ_P0088877 Tenm3 protein_coding protein_coding MGP_BALBcJ_T0088878.1 MGP_BALBcJ_G0033585.1 mouse_genomes_project 8 45952717 46113774 - MGP_BALBcJ_P0088878 Tenm3 protein_coding protein_coding MGP_BALBcJ_T0088545.1 MGP_BALBcJ_G0033473.1 mouse_genomes_project 8 23516079 23520808 + MGP_BALBcJ_P0088545 Thap1 protein_coding protein_coding MGP_BALBcJ_T0088546.1 MGP_BALBcJ_G0033473.1 mouse_genomes_project 8 23516100 23520643 + MGP_BALBcJ_P0088546 Thap1 protein_coding protein_coding MGP_BALBcJ_T0088547.1 MGP_BALBcJ_G0033473.1 mouse_genomes_project 8 23516122 23517280 + Thap1 protein_coding retained_intron MGP_BALBcJ_T0100140.1 MGP_BALBcJ_G0038176.1 mouse_genomes_project 8 83981574 83981672 + Gm24490 snRNA snRNA MGP_BALBcJ_T0088147.1 MGP_BALBcJ_G0033340.1 mouse_genomes_project 8 8795096 8890654 + MGP_BALBcJ_P0088147 Arhgef7 protein_coding protein_coding MGP_BALBcJ_T0088148.1 MGP_BALBcJ_G0033340.1 mouse_genomes_project 8 8795243 8894750 + MGP_BALBcJ_P0088148 Arhgef7 protein_coding protein_coding MGP_BALBcJ_T0088149.1 MGP_BALBcJ_G0033340.1 mouse_genomes_project 8 8849652 8902812 + MGP_BALBcJ_P0088149 Arhgef7 protein_coding protein_coding MGP_BALBcJ_T0088150.1 MGP_BALBcJ_G0033340.1 mouse_genomes_project 8 8879954 8883938 + Arhgef7 protein_coding processed_transcript MGP_BALBcJ_T0088151.1 MGP_BALBcJ_G0033340.1 mouse_genomes_project 8 8897830 8899893 + Arhgef7 protein_coding processed_transcript MGP_BALBcJ_T0015979.1 MGP_BALBcJ_G0014076.1 mouse_genomes_project 8 95349898 95350888 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011003.1 MGP_BALBcJ_G0009128.1 mouse_genomes_project 8 119598984 119599082 - Gm27530 miRNA miRNA MGP_BALBcJ_T0009114.1 MGP_BALBcJ_G0007330.1 mouse_genomes_project 8 85060515 85079040 - Gm27207 lincRNA lincRNA MGP_BALBcJ_T0088653.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 33955190 34122932 - MGP_BALBcJ_P0088653 Dlc1 protein_coding protein_coding MGP_BALBcJ_T0088654.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 33955190 34002886 - MGP_BALBcJ_P0088654 Dlc1 protein_coding protein_coding MGP_BALBcJ_T0088655.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 33957676 34346018 - MGP_BALBcJ_P0088655 Dlc1 protein_coding protein_coding MGP_BALBcJ_T0088656.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 33959633 33964605 - Dlc1 protein_coding retained_intron MGP_BALBcJ_T0088657.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 33980417 34002817 - Dlc1 protein_coding retained_intron MGP_BALBcJ_T0088658.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 34234739 34345933 - Dlc1 protein_coding retained_intron MGP_BALBcJ_T0088659.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 34243564 34345998 - Dlc1 protein_coding retained_intron MGP_BALBcJ_T0088660.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 34329185 34346012 - Dlc1 protein_coding retained_intron MGP_BALBcJ_T0088661.1 MGP_BALBcJ_G0033521.1 mouse_genomes_project 8 34332156 34346718 - MGP_BALBcJ_P0088661 Dlc1 protein_coding protein_coding MGP_BALBcJ_T0005374.1 MGP_BALBcJ_G0004556.1 mouse_genomes_project 8 115472915 115480598 + Gm15395 antisense antisense MGP_BALBcJ_T0090411.1 MGP_BALBcJ_G0034080.1 mouse_genomes_project 8 107831202 107839361 + MGP_BALBcJ_P0090411 Txnl4b protein_coding protein_coding MGP_BALBcJ_T0090412.1 MGP_BALBcJ_G0034080.1 mouse_genomes_project 8 107834197 107838833 + MGP_BALBcJ_P0090412 Txnl4b protein_coding protein_coding MGP_BALBcJ_T0087998.1 MGP_BALBcJ_G0033291.1 mouse_genomes_project 8 527639 549438 + MGP_BALBcJ_P0087998 Camsap3 protein_coding protein_coding MGP_BALBcJ_T0087999.1 MGP_BALBcJ_G0033291.1 mouse_genomes_project 8 527639 549438 + MGP_BALBcJ_P0087999 Camsap3 protein_coding protein_coding MGP_BALBcJ_T0088000.1 MGP_BALBcJ_G0033291.1 mouse_genomes_project 8 528001 549413 + MGP_BALBcJ_P0088000 Camsap3 protein_coding unknown_likely_coding MGP_BALBcJ_T0089404.1 MGP_BALBcJ_G0033740.1 mouse_genomes_project 8 69351587 69352950 + MGP_BALBcJ_P0089404 Insl3 protein_coding protein_coding MGP_BALBcJ_T0090349.1 MGP_BALBcJ_G0034056.1 mouse_genomes_project 8 104607665 104618216 + MGP_BALBcJ_P0090349 Zfp90 protein_coding protein_coding MGP_BALBcJ_T0089734.1 MGP_BALBcJ_G0033845.1 mouse_genomes_project 8 82387886 82391726 + MGP_BALBcJ_P0089734 G430095P16Rik protein_coding protein_coding MGP_BALBcJ_T0090947.1 MGP_BALBcJ_G0034236.1 mouse_genomes_project 8 122419710 122420153 + MGP_BALBcJ_P0090947 protein_coding protein_coding MGP_BALBcJ_T0088346.1 MGP_BALBcJ_G0033406.1 mouse_genomes_project 8 18195329 18200747 - MGP_BALBcJ_P0088346 Gm6040 protein_coding protein_coding MGP_BALBcJ_T0009180.1 MGP_BALBcJ_G0007373.1 mouse_genomes_project 8 120791691 120794783 + Gm22 lincRNA lincRNA MGP_BALBcJ_T0009181.1 MGP_BALBcJ_G0007373.1 mouse_genomes_project 8 120791691 120794787 + Gm22 lincRNA lincRNA MGP_BALBcJ_T0087992.1 MGP_BALBcJ_G0033289.1 mouse_genomes_project 8 454014 482728 + MGP_BALBcJ_P0087992 Pnpla6 protein_coding protein_coding MGP_BALBcJ_T0087993.1 MGP_BALBcJ_G0033289.1 mouse_genomes_project 8 454014 482728 + MGP_BALBcJ_P0087993 Pnpla6 protein_coding protein_coding MGP_BALBcJ_T0087994.1 MGP_BALBcJ_G0033289.1 mouse_genomes_project 8 455175 482731 + MGP_BALBcJ_P0087994 Pnpla6 protein_coding unknown_likely_coding MGP_BALBcJ_T0089270.1 MGP_BALBcJ_G0033697.1 mouse_genomes_project 8 68311470 68316959 + MGP_BALBcJ_P0089270 Lsm4 protein_coding protein_coding MGP_BALBcJ_T0089271.1 MGP_BALBcJ_G0033697.1 mouse_genomes_project 8 68311654 68316255 + MGP_BALBcJ_P0089271 Lsm4 protein_coding protein_coding MGP_BALBcJ_T0089272.1 MGP_BALBcJ_G0033697.1 mouse_genomes_project 8 68315871 68316323 + Lsm4 protein_coding retained_intron MGP_BALBcJ_T0088883.1 MGP_BALBcJ_G0033587.1 mouse_genomes_project 8 51126666 51138230 + MGP_BALBcJ_P0088883 Aga protein_coding protein_coding MGP_BALBcJ_T0090617.1 MGP_BALBcJ_G0034151.1 mouse_genomes_project 8 116248472 116259085 - MGP_BALBcJ_P0090617 Mphosph6 protein_coding protein_coding MGP_BALBcJ_T0090090.1 MGP_BALBcJ_G0033955.1 mouse_genomes_project 8 92872665 92909406 - MGP_BALBcJ_P0090090 Kifc3 protein_coding protein_coding MGP_BALBcJ_T0090091.1 MGP_BALBcJ_G0033955.1 mouse_genomes_project 8 92872671 92909475 - MGP_BALBcJ_P0090091 Kifc3 protein_coding protein_coding MGP_BALBcJ_T0090446.1 MGP_BALBcJ_G0034095.1 mouse_genomes_project 8 108410819 108439219 - MGP_BALBcJ_P0090446 Calb2 protein_coding protein_coding MGP_BALBcJ_T0088110.1 MGP_BALBcJ_G0033321.1 mouse_genomes_project 8 2630976 2632961 + MGP_BALBcJ_P0088110 protein_coding protein_coding MGP_BALBcJ_T0010943.1 MGP_BALBcJ_G0009068.1 mouse_genomes_project 8 37713147 37713202 - Mir7666 miRNA miRNA MGP_BALBcJ_T0088268.1 MGP_BALBcJ_G0033374.1 mouse_genomes_project 8 11100948 11162019 - MGP_BALBcJ_P0088268 Erich1 protein_coding protein_coding MGP_BALBcJ_T0089993.1 MGP_BALBcJ_G0033922.1 mouse_genomes_project 8 91121965 91133639 - MGP_BALBcJ_P0089993 Ces1h protein_coding protein_coding MGP_BALBcJ_T0011702.1 MGP_BALBcJ_G0009827.1 mouse_genomes_project 8 77574321 77574496 + Gm27820 misc_RNA misc_RNA MGP_BALBcJ_T0101374.1 MGP_BALBcJ_G0039410.1 mouse_genomes_project 8 13892270 13892390 + Gm25278 snoRNA snoRNA MGP_BALBcJ_T0005340.1 MGP_BALBcJ_G0004527.1 mouse_genomes_project 8 63918600 63921513 - Gm15354 antisense antisense MGP_BALBcJ_T0089316.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69003756 69006629 + MGP_BALBcJ_P0089316 Use1 protein_coding protein_coding MGP_BALBcJ_T0089317.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69003850 69006632 + MGP_BALBcJ_P0089317 Use1 protein_coding protein_coding MGP_BALBcJ_T0089318.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69003913 69004715 + MGP_BALBcJ_P0089318 Use1 protein_coding protein_coding MGP_BALBcJ_T0089319.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004125 69006632 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089320.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004125 69006632 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089321.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004125 69006632 + MGP_BALBcJ_P0089321 Use1 protein_coding protein_coding MGP_BALBcJ_T0089322.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004151 69005731 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089323.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004151 69005898 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089324.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004292 69005585 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089325.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004549 69005122 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089326.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69004688 69006632 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089327.1 MGP_BALBcJ_G0033718.1 mouse_genomes_project 8 69005691 69006571 + Use1 protein_coding retained_intron MGP_BALBcJ_T0089096.1 MGP_BALBcJ_G0033651.1 mouse_genomes_project 8 67304484 67308881 - MGP_BALBcJ_P0089096 Zfp869 protein_coding protein_coding MGP_BALBcJ_T0005334.1 MGP_BALBcJ_G0004522.1 mouse_genomes_project 8 52182666 52215359 - 5330439A09Rik antisense antisense MGP_BALBcJ_T0090101.1 MGP_BALBcJ_G0033957.1 mouse_genomes_project 8 93081731 93084317 + MGP_BALBcJ_P0090101 Tepp protein_coding protein_coding MGP_BALBcJ_T0090102.1 MGP_BALBcJ_G0033957.1 mouse_genomes_project 8 93081751 93091727 + MGP_BALBcJ_P0090102 Tepp protein_coding protein_coding MGP_BALBcJ_T0090103.1 MGP_BALBcJ_G0033957.1 mouse_genomes_project 8 93082764 93092513 + MGP_BALBcJ_P0090103 Tepp protein_coding protein_coding MGP_BALBcJ_T0090104.1 MGP_BALBcJ_G0033957.1 mouse_genomes_project 8 93082768 93092513 + MGP_BALBcJ_P0090104 Tepp protein_coding protein_coding MGP_BALBcJ_T0090105.1 MGP_BALBcJ_G0033957.1 mouse_genomes_project 8 93091621 93097505 + Tepp protein_coding retained_intron MGP_BALBcJ_T0090106.1 MGP_BALBcJ_G0033957.1 mouse_genomes_project 8 93091679 93097393 + MGP_BALBcJ_P0090106 Tepp protein_coding protein_coding MGP_BALBcJ_T0089016.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63152721 64009768 + protein_coding processed_transcript MGP_BALBcJ_T0089017.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63152830 64009179 + MGP_BALBcJ_P0089017 protein_coding protein_coding MGP_BALBcJ_T0089018.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63152846 64009521 + MGP_BALBcJ_P0089018 protein_coding protein_coding MGP_BALBcJ_T0089019.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63152858 63502113 + protein_coding retained_intron MGP_BALBcJ_T0089020.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63152907 64011445 + MGP_BALBcJ_P0089020 protein_coding protein_coding MGP_BALBcJ_T0089021.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63153346 64010235 + MGP_BALBcJ_P0089021 protein_coding protein_coding MGP_BALBcJ_T0089022.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63500941 64011433 + MGP_BALBcJ_P0089022 protein_coding protein_coding MGP_BALBcJ_T0089023.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63653421 64011433 + MGP_BALBcJ_P0089023 protein_coding protein_coding MGP_BALBcJ_T0089024.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63653421 64011433 + MGP_BALBcJ_P0089024 protein_coding protein_coding MGP_BALBcJ_T0089025.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63920271 64010229 + MGP_BALBcJ_P0089025 protein_coding protein_coding MGP_BALBcJ_T0089026.1 MGP_BALBcJ_G0033628.1 mouse_genomes_project 8 63920278 64010239 + MGP_BALBcJ_P0089026 protein_coding protein_coding MGP_BALBcJ_T0089565.1 MGP_BALBcJ_G0033796.1 mouse_genomes_project 8 78361175 78479126 - MGP_BALBcJ_P0089565 Gab1 protein_coding protein_coding MGP_BALBcJ_T0088219.1 MGP_BALBcJ_G0033354.1 mouse_genomes_project 8 10244520 10261255 + MGP_BALBcJ_P0088219 Lamp1 protein_coding protein_coding MGP_BALBcJ_T0010995.1 MGP_BALBcJ_G0009120.1 mouse_genomes_project 8 109488904 109488986 + Gm23193 miRNA miRNA MGP_BALBcJ_T0088816.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 43993955 44059496 + MGP_BALBcJ_P0088816 Acsl1 protein_coding protein_coding MGP_BALBcJ_T0088817.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 43994013 44039815 + Acsl1 protein_coding retained_intron MGP_BALBcJ_T0088818.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 43994091 44034575 + MGP_BALBcJ_P0088818 Acsl1 protein_coding protein_coding MGP_BALBcJ_T0088819.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 44014156 44059026 + MGP_BALBcJ_P0088819 Acsl1 protein_coding protein_coding MGP_BALBcJ_T0088820.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 44014156 44028896 + MGP_BALBcJ_P0088820 Acsl1 protein_coding protein_coding MGP_BALBcJ_T0088821.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 44016014 44057925 + MGP_BALBcJ_P0088821 Acsl1 protein_coding protein_coding MGP_BALBcJ_T0088822.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 44050230 44052097 + Acsl1 protein_coding retained_intron MGP_BALBcJ_T0088823.1 MGP_BALBcJ_G0033567.1 mouse_genomes_project 8 44054508 44057900 + MGP_BALBcJ_P0088823 Acsl1 protein_coding protein_coding MGP_BALBcJ_T0002335.1 MGP_BALBcJ_G0002245.1 mouse_genomes_project 8 118595427 118596952 + TEC TEC MGP_BALBcJ_T0088357.1 MGP_BALBcJ_G0033417.1 mouse_genomes_project 8 19285203 19289482 + MGP_BALBcJ_P0088357 Ccdc70 protein_coding protein_coding MGP_BALBcJ_T0088358.1 MGP_BALBcJ_G0033417.1 mouse_genomes_project 8 19286031 19289506 + MGP_BALBcJ_P0088358 Ccdc70 protein_coding protein_coding MGP_BALBcJ_T0089446.1 MGP_BALBcJ_G0033751.1 mouse_genomes_project 8 69867046 69878453 + MGP_BALBcJ_P0089446 Hsh2d protein_coding protein_coding MGP_BALBcJ_T0089447.1 MGP_BALBcJ_G0033751.1 mouse_genomes_project 8 69870964 69878490 + MGP_BALBcJ_P0089447 Hsh2d protein_coding protein_coding MGP_BALBcJ_T0015939.1 MGP_BALBcJ_G0014036.1 mouse_genomes_project 8 33408685 33409066 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009164.1 MGP_BALBcJ_G0007361.1 mouse_genomes_project 8 119142933 119152671 + Gm26537 lincRNA lincRNA MGP_BALBcJ_T0090429.1 MGP_BALBcJ_G0034087.1 mouse_genomes_project 8 108042198 108128520 + MGP_BALBcJ_P0090429 Ap1g1 protein_coding protein_coding MGP_BALBcJ_T0090430.1 MGP_BALBcJ_G0034087.1 mouse_genomes_project 8 108042541 108069864 + Ap1g1 protein_coding processed_transcript MGP_BALBcJ_T0090431.1 MGP_BALBcJ_G0034087.1 mouse_genomes_project 8 108042550 108125674 + MGP_BALBcJ_P0090431 Ap1g1 protein_coding protein_coding MGP_BALBcJ_T0090432.1 MGP_BALBcJ_G0034087.1 mouse_genomes_project 8 108107500 108114002 + Ap1g1 protein_coding retained_intron MGP_BALBcJ_T0090433.1 MGP_BALBcJ_G0034087.1 mouse_genomes_project 8 108122763 108124606 + Ap1g1 protein_coding retained_intron MGP_BALBcJ_T0090434.1 MGP_BALBcJ_G0034087.1 mouse_genomes_project 8 108127423 108128519 + MGP_BALBcJ_P0090434 Ap1g1 protein_coding protein_coding MGP_BALBcJ_T0009048.1 MGP_BALBcJ_G0007275.1 mouse_genomes_project 8 8540427 8542739 + E230013L22Rik lincRNA lincRNA MGP_BALBcJ_T0088736.1 MGP_BALBcJ_G0033548.1 mouse_genomes_project 8 41169750 41227525 - MGP_BALBcJ_P0088736 protein_coding protein_coding MGP_BALBcJ_T0088435.1 MGP_BALBcJ_G0033445.1 mouse_genomes_project 8 21773558 21775363 - MGP_BALBcJ_P0088435 1810011O10Rik protein_coding protein_coding MGP_BALBcJ_T0089867.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84167274 84263564 - MGP_BALBcJ_P0089867 Abcc12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089868.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84189588 84263595 - MGP_BALBcJ_P0089868 Abcc12 protein_coding protein_coding MGP_BALBcJ_T0089869.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84189592 84219642 - MGP_BALBcJ_P0089869 Abcc12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089870.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84189850 84255313 - MGP_BALBcJ_P0089870 Abcc12 protein_coding protein_coding MGP_BALBcJ_T0089871.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84189850 84255313 - MGP_BALBcJ_P0089871 Abcc12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089872.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84189850 84255313 - MGP_BALBcJ_P0089872 Abcc12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089873.1 MGP_BALBcJ_G0033883.1 mouse_genomes_project 8 84218855 84263595 - MGP_BALBcJ_P0089873 Abcc12 protein_coding protein_coding MGP_BALBcJ_T0088296.1 MGP_BALBcJ_G0033381.1 mouse_genomes_project 8 12111201 12115589 - MGP_BALBcJ_P0088296 BB014433 protein_coding protein_coding MGP_BALBcJ_T0088297.1 MGP_BALBcJ_G0033381.1 mouse_genomes_project 8 12111204 12115580 - MGP_BALBcJ_P0088297 BB014433 protein_coding protein_coding MGP_BALBcJ_T0011009.1 MGP_BALBcJ_G0009134.1 mouse_genomes_project 8 123624768 123624825 + Gm22197 miRNA miRNA MGP_BALBcJ_T0100152.1 MGP_BALBcJ_G0038188.1 mouse_genomes_project 8 110204044 110204148 + Gm23853 snRNA snRNA MGP_BALBcJ_T0101390.1 MGP_BALBcJ_G0039426.1 mouse_genomes_project 8 43087854 43087991 - Gm23604 snoRNA snoRNA MGP_BALBcJ_T0090542.1 MGP_BALBcJ_G0034120.1 mouse_genomes_project 8 110089436 110177294 - MGP_BALBcJ_P0090542 Cfdp1 protein_coding protein_coding MGP_BALBcJ_T0015932.1 MGP_BALBcJ_G0014029.1 mouse_genomes_project 8 19545901 19546192 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089274.1 MGP_BALBcJ_G0033699.1 mouse_genomes_project 8 68337375 68337918 - MGP_BALBcJ_P0089274 protein_coding protein_coding MGP_BALBcJ_T0102834.1 MGP_BALBcJ_G0040649.1 mouse_genomes_project 8 16241924 16244455 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002326.1 MGP_BALBcJ_G0002237.1 mouse_genomes_project 8 73163958 73164365 - TEC TEC MGP_BALBcJ_T0010966.1 MGP_BALBcJ_G0009091.1 mouse_genomes_project 8 81858680 81858767 + Mir27a miRNA miRNA MGP_BALBcJ_T0009078.1 MGP_BALBcJ_G0007298.1 mouse_genomes_project 8 39266611 39483461 + 2810404M03Rik lincRNA lincRNA MGP_BALBcJ_T0089227.1 MGP_BALBcJ_G0033685.1 mouse_genomes_project 8 68098460 68101942 - MGP_BALBcJ_P0089227 Tmem59l protein_coding protein_coding MGP_BALBcJ_T0018419.1 MGP_BALBcJ_G0015651.1 mouse_genomes_project 8 42561197 42566088 - AY512931 processed_transcript processed_transcript MGP_BALBcJ_T0088836.1 MGP_BALBcJ_G0033570.1 mouse_genomes_project 8 44141581 44163921 + MGP_BALBcJ_P0088836 Casp3 protein_coding unknown_likely_coding MGP_BALBcJ_T0090306.1 MGP_BALBcJ_G0034041.1 mouse_genomes_project 8 104112563 104114432 - MGP_BALBcJ_P0090306 Ctrl protein_coding protein_coding MGP_BALBcJ_T0090263.1 MGP_BALBcJ_G0034020.1 mouse_genomes_project 8 103626352 103630386 - MGP_BALBcJ_P0090263 Tppp3 protein_coding protein_coding MGP_BALBcJ_T0090264.1 MGP_BALBcJ_G0034020.1 mouse_genomes_project 8 103626528 103628270 - MGP_BALBcJ_P0090264 Tppp3 protein_coding protein_coding MGP_BALBcJ_T0090265.1 MGP_BALBcJ_G0034020.1 mouse_genomes_project 8 103626542 103627522 - MGP_BALBcJ_P0090265 Tppp3 protein_coding protein_coding MGP_BALBcJ_T0089649.1 MGP_BALBcJ_G0033823.1 mouse_genomes_project 8 81656537 81658474 - MGP_BALBcJ_P0089649 2210011C24Rik protein_coding protein_coding MGP_BALBcJ_T0089650.1 MGP_BALBcJ_G0033823.1 mouse_genomes_project 8 81656554 81657727 - MGP_BALBcJ_P0089650 2210011C24Rik protein_coding protein_coding MGP_BALBcJ_T0089651.1 MGP_BALBcJ_G0033823.1 mouse_genomes_project 8 81657082 81657727 - MGP_BALBcJ_P0089651 2210011C24Rik protein_coding protein_coding MGP_BALBcJ_T0089652.1 MGP_BALBcJ_G0033823.1 mouse_genomes_project 8 81657759 81658487 - MGP_BALBcJ_P0089652 2210011C24Rik protein_coding protein_coding MGP_BALBcJ_T0089653.1 MGP_BALBcJ_G0033823.1 mouse_genomes_project 8 81657767 81658472 - MGP_BALBcJ_P0089653 2210011C24Rik protein_coding protein_coding MGP_BALBcJ_T0090833.1 MGP_BALBcJ_G0034204.1 mouse_genomes_project 8 121096696 121101810 + MGP_BALBcJ_P0090833 Cdt1 protein_coding protein_coding MGP_BALBcJ_T0010990.1 MGP_BALBcJ_G0009115.1 mouse_genomes_project 8 107188366 107188445 + Mir3108 miRNA miRNA MGP_BALBcJ_T0090956.1 MGP_BALBcJ_G0034242.1 mouse_genomes_project 8 122794607 122910757 + MGP_BALBcJ_P0090956 Galnt2 protein_coding protein_coding MGP_BALBcJ_T0090957.1 MGP_BALBcJ_G0034242.1 mouse_genomes_project 8 122794724 122898288 + Galnt2 protein_coding processed_transcript MGP_BALBcJ_T0090958.1 MGP_BALBcJ_G0034242.1 mouse_genomes_project 8 122858537 122887379 + Galnt2 protein_coding processed_transcript MGP_BALBcJ_T0090959.1 MGP_BALBcJ_G0034242.1 mouse_genomes_project 8 122858799 122910759 + Galnt2 protein_coding processed_transcript MGP_BALBcJ_T0089157.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788736 67797491 + Tmem161a protein_coding processed_transcript MGP_BALBcJ_T0089158.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788785 67800228 + MGP_BALBcJ_P0089158 Tmem161a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089159.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788793 67799436 + MGP_BALBcJ_P0089159 Tmem161a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089160.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788796 67793244 + Tmem161a protein_coding retained_intron MGP_BALBcJ_T0089161.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788796 67793518 + Tmem161a protein_coding processed_transcript MGP_BALBcJ_T0089162.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788799 67797299 + MGP_BALBcJ_P0089162 Tmem161a protein_coding protein_coding MGP_BALBcJ_T0089163.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67788818 67799417 + MGP_BALBcJ_P0089163 Tmem161a protein_coding protein_coding MGP_BALBcJ_T0089164.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67790656 67799428 + MGP_BALBcJ_P0089164 Tmem161a protein_coding protein_coding MGP_BALBcJ_T0089165.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67792933 67793651 + Tmem161a protein_coding retained_intron MGP_BALBcJ_T0089166.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67793328 67795426 + Tmem161a protein_coding processed_transcript MGP_BALBcJ_T0089167.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67793579 67797773 + MGP_BALBcJ_P0089167 Tmem161a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089168.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67795268 67797874 + Tmem161a protein_coding retained_intron MGP_BALBcJ_T0089169.1 MGP_BALBcJ_G0033673.1 mouse_genomes_project 8 67797099 67798593 + Tmem161a protein_coding retained_intron MGP_BALBcJ_T0090180.1 MGP_BALBcJ_G0033987.1 mouse_genomes_project 8 102674030 102683477 + MGP_BALBcJ_P0090180 Car7 protein_coding protein_coding MGP_BALBcJ_T0090181.1 MGP_BALBcJ_G0033987.1 mouse_genomes_project 8 102681009 102682193 + Car7 protein_coding retained_intron MGP_BALBcJ_T0098405.1 MGP_BALBcJ_G0036459.1 mouse_genomes_project 8 119642685 119643775 + pseudogene pseudogene MGP_BALBcJ_T0089535.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76606130 76772569 + MGP_BALBcJ_P0089535 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0089536.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76606130 76651024 + MGP_BALBcJ_P0089536 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0089537.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76606280 76769682 + MGP_BALBcJ_P0089537 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0089538.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76697185 76772592 + MGP_BALBcJ_P0089538 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0089539.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76699341 76772018 + MGP_BALBcJ_P0089539 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0089540.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76754625 76769680 + MGP_BALBcJ_P0089540 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0089541.1 MGP_BALBcJ_G0033785.1 mouse_genomes_project 8 76757790 76768587 + MGP_BALBcJ_P0089541 Zfp827 protein_coding protein_coding MGP_BALBcJ_T0005348.1 MGP_BALBcJ_G0004534.1 mouse_genomes_project 8 75085484 75087000 + 0610038B21Rik antisense antisense MGP_BALBcJ_T0005349.1 MGP_BALBcJ_G0004534.1 mouse_genomes_project 8 75086535 75092295 + 0610038B21Rik antisense antisense MGP_BALBcJ_T0010967.1 MGP_BALBcJ_G0009092.1 mouse_genomes_project 8 81858825 81858930 + Mir24-2 miRNA miRNA MGP_BALBcJ_T0088260.1 MGP_BALBcJ_G0033371.1 mouse_genomes_project 8 10971084 10972930 + MGP_BALBcJ_P0088260 protein_coding protein_coding MGP_BALBcJ_T0088076.1 MGP_BALBcJ_G0033311.1 mouse_genomes_project 8 1240870 1243992 + MGP_BALBcJ_P0088076 Snapc2 protein_coding protein_coding MGP_BALBcJ_T0090561.1 MGP_BALBcJ_G0034129.1 mouse_genomes_project 8 112007909 112017509 + MGP_BALBcJ_P0090561 Mon1b protein_coding protein_coding MGP_BALBcJ_T0090562.1 MGP_BALBcJ_G0034129.1 mouse_genomes_project 8 112008122 112017509 + MGP_BALBcJ_P0090562 Mon1b protein_coding protein_coding MGP_BALBcJ_T0088096.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484166 1509685 + MGP_BALBcJ_P0088096 Cers4 protein_coding protein_coding MGP_BALBcJ_T0088097.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484280 1506750 + MGP_BALBcJ_P0088097 Cers4 protein_coding protein_coding MGP_BALBcJ_T0088098.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484339 1522762 + MGP_BALBcJ_P0088098 Cers4 protein_coding protein_coding MGP_BALBcJ_T0088099.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484542 1514713 + MGP_BALBcJ_P0088099 Cers4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088100.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484589 1516143 + Cers4 protein_coding retained_intron MGP_BALBcJ_T0088101.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484592 1515985 + MGP_BALBcJ_P0088101 Cers4 protein_coding protein_coding MGP_BALBcJ_T0088102.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484598 1513488 + Cers4 protein_coding retained_intron MGP_BALBcJ_T0088103.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484622 1513579 + Cers4 protein_coding retained_intron MGP_BALBcJ_T0088104.1 MGP_BALBcJ_G0033316.1 mouse_genomes_project 8 1484661 1511554 + Cers4 protein_coding retained_intron MGP_BALBcJ_T0089681.1 MGP_BALBcJ_G0033838.1 mouse_genomes_project 8 81910117 81922258 - MGP_BALBcJ_P0089681 Ccdc130 protein_coding protein_coding MGP_BALBcJ_T0089682.1 MGP_BALBcJ_G0033838.1 mouse_genomes_project 8 81910126 81913730 - Ccdc130 protein_coding retained_intron MGP_BALBcJ_T0089683.1 MGP_BALBcJ_G0033838.1 mouse_genomes_project 8 81910938 81918643 - MGP_BALBcJ_P0089683 Ccdc130 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089684.1 MGP_BALBcJ_G0033838.1 mouse_genomes_project 8 81912219 81913969 - Ccdc130 protein_coding retained_intron MGP_BALBcJ_T0005347.1 MGP_BALBcJ_G0004533.1 mouse_genomes_project 8 66682979 66683690 + antisense antisense MGP_BALBcJ_T0098724.1 MGP_BALBcJ_G0036778.1 mouse_genomes_project 8 763114 763404 - Rprl3 ribozyme ribozyme MGP_BALBcJ_T0005308.1 MGP_BALBcJ_G0004503.1 mouse_genomes_project 8 9964912 9968551 - Gm15353 antisense antisense MGP_BALBcJ_T0005309.1 MGP_BALBcJ_G0004503.1 mouse_genomes_project 8 9965056 9968541 - Gm15353 antisense antisense MGP_BALBcJ_T0100149.1 MGP_BALBcJ_G0038185.1 mouse_genomes_project 8 105227171 105227281 - Gm22085 snRNA snRNA MGP_BALBcJ_T0090188.1 MGP_BALBcJ_G0033992.1 mouse_genomes_project 8 102864077 102872255 + MGP_BALBcJ_P0090188 Ces2a protein_coding protein_coding MGP_BALBcJ_T0090189.1 MGP_BALBcJ_G0033992.1 mouse_genomes_project 8 102864092 102872259 + MGP_BALBcJ_P0090189 Ces2a protein_coding protein_coding MGP_BALBcJ_T0090190.1 MGP_BALBcJ_G0033992.1 mouse_genomes_project 8 102864102 102868149 + Ces2a protein_coding processed_transcript MGP_BALBcJ_T0090191.1 MGP_BALBcJ_G0033992.1 mouse_genomes_project 8 102870231 102871869 + Ces2a protein_coding retained_intron MGP_BALBcJ_T0088753.1 MGP_BALBcJ_G0033555.1 mouse_genomes_project 8 42904669 42919709 - MGP_BALBcJ_P0088753 Tlr3 protein_coding protein_coding MGP_BALBcJ_T0088754.1 MGP_BALBcJ_G0033555.1 mouse_genomes_project 8 42904915 42919778 - MGP_BALBcJ_P0088754 Tlr3 protein_coding protein_coding MGP_BALBcJ_T0018407.1 MGP_BALBcJ_G0015644.1 mouse_genomes_project 8 4875241 4877307 + Gm28262 processed_transcript lincRNA MGP_BALBcJ_T0018408.1 MGP_BALBcJ_G0015644.1 mouse_genomes_project 8 4877270 4882890 + Gm28262 processed_transcript TEC MGP_BALBcJ_T0091032.1 MGP_BALBcJ_G0034269.1 mouse_genomes_project 8 125542798 125557926 - MGP_BALBcJ_P0091032 Tomm20 protein_coding protein_coding MGP_BALBcJ_T0015954.1 MGP_BALBcJ_G0014051.1 mouse_genomes_project 8 66360882 66361507 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090405.1 MGP_BALBcJ_G0034075.1 mouse_genomes_project 8 105679246 105803933 + MGP_BALBcJ_P0090405 Wwp2 protein_coding protein_coding MGP_BALBcJ_T0090974.1 MGP_BALBcJ_G0034247.1 mouse_genomes_project 8 123203710 123231858 - MGP_BALBcJ_P0090974 2310022B05Rik protein_coding protein_coding MGP_BALBcJ_T0091068.1 MGP_BALBcJ_G0034275.1 mouse_genomes_project 8 127604686 127681075 - MGP_BALBcJ_P0091068 Ccdc7a protein_coding protein_coding MGP_BALBcJ_T0010965.1 MGP_BALBcJ_G0009090.1 mouse_genomes_project 8 81858526 81858601 + Mir23a miRNA miRNA MGP_BALBcJ_T0088988.1 MGP_BALBcJ_G0033616.1 mouse_genomes_project 8 59622467 59687354 - MGP_BALBcJ_P0088988 Anxa10 protein_coding protein_coding MGP_BALBcJ_T0088989.1 MGP_BALBcJ_G0033616.1 mouse_genomes_project 8 59622946 59687360 - MGP_BALBcJ_P0088989 Anxa10 protein_coding protein_coding MGP_BALBcJ_T0090114.1 MGP_BALBcJ_G0033963.1 mouse_genomes_project 8 93302816 93327981 + MGP_BALBcJ_P0090114 Ccdc113 protein_coding protein_coding MGP_BALBcJ_T0089695.1 MGP_BALBcJ_G0033840.1 mouse_genomes_project 8 82323532 82325052 - MGP_BALBcJ_P0089695 Ier2 protein_coding protein_coding MGP_BALBcJ_T0090233.1 MGP_BALBcJ_G0034008.1 mouse_genomes_project 8 103429563 103434957 + MGP_BALBcJ_P0090233 Nol3 protein_coding protein_coding MGP_BALBcJ_T0087985.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 437525 453863 + MGP_BALBcJ_P0087985 Mcoln1 protein_coding protein_coding MGP_BALBcJ_T0087986.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 437572 445567 + MGP_BALBcJ_P0087986 Mcoln1 protein_coding protein_coding MGP_BALBcJ_T0087987.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 444404 453863 + Mcoln1 protein_coding retained_intron MGP_BALBcJ_T0087988.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 449294 451650 + Mcoln1 protein_coding retained_intron MGP_BALBcJ_T0087989.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 450223 451435 + Mcoln1 protein_coding retained_intron MGP_BALBcJ_T0087990.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 451309 453855 + Mcoln1 protein_coding retained_intron MGP_BALBcJ_T0087991.1 MGP_BALBcJ_G0033288.1 mouse_genomes_project 8 453192 453863 + Mcoln1 protein_coding retained_intron MGP_BALBcJ_T0090139.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 96846404 97238433 - MGP_BALBcJ_P0090139 Cdh8 protein_coding protein_coding MGP_BALBcJ_T0090140.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 96846816 97238433 - MGP_BALBcJ_P0090140 Cdh8 protein_coding protein_coding MGP_BALBcJ_T0090141.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 96850708 97238445 - MGP_BALBcJ_P0090141 Cdh8 protein_coding protein_coding MGP_BALBcJ_T0090142.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 96850899 97238325 - MGP_BALBcJ_P0090142 Cdh8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090143.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 96850899 97238477 - MGP_BALBcJ_P0090143 Cdh8 protein_coding protein_coding MGP_BALBcJ_T0090144.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 96991389 97101749 - Cdh8 protein_coding retained_intron MGP_BALBcJ_T0090145.1 MGP_BALBcJ_G0033971.1 mouse_genomes_project 8 97043938 97238445 - MGP_BALBcJ_P0090145 Cdh8 protein_coding protein_coding MGP_BALBcJ_T0089494.1 MGP_BALBcJ_G0033771.1 mouse_genomes_project 8 72679320 72686163 + MGP_BALBcJ_P0089494 Hmox1 protein_coding protein_coding MGP_BALBcJ_T0089495.1 MGP_BALBcJ_G0033771.1 mouse_genomes_project 8 72679370 72682013 + Hmox1 protein_coding retained_intron MGP_BALBcJ_T0089496.1 MGP_BALBcJ_G0033771.1 mouse_genomes_project 8 72679579 72682766 + MGP_BALBcJ_P0089496 Hmox1 protein_coding protein_coding MGP_BALBcJ_T0090268.1 MGP_BALBcJ_G0034023.1 mouse_genomes_project 8 103688939 103736961 - MGP_BALBcJ_P0090268 Atp6v0d1 protein_coding protein_coding MGP_BALBcJ_T0090269.1 MGP_BALBcJ_G0034023.1 mouse_genomes_project 8 103695134 103703960 - Atp6v0d1 protein_coding retained_intron MGP_BALBcJ_T0088429.1 MGP_BALBcJ_G0033443.1 mouse_genomes_project 8 20957702 21220063 + MGP_BALBcJ_P0088429 Zmat4 protein_coding protein_coding MGP_BALBcJ_T0088430.1 MGP_BALBcJ_G0033443.1 mouse_genomes_project 8 20992760 21389323 + MGP_BALBcJ_P0088430 Zmat4 protein_coding protein_coding MGP_BALBcJ_T0088431.1 MGP_BALBcJ_G0033443.1 mouse_genomes_project 8 20992760 21482953 + MGP_BALBcJ_P0088431 Zmat4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088432.1 MGP_BALBcJ_G0033443.1 mouse_genomes_project 8 21024101 21126782 + MGP_BALBcJ_P0088432 Zmat4 protein_coding protein_coding MGP_BALBcJ_T0088433.1 MGP_BALBcJ_G0033443.1 mouse_genomes_project 8 21254024 21341478 + Zmat4 protein_coding retained_intron MGP_BALBcJ_T0090608.1 MGP_BALBcJ_G0034146.1 mouse_genomes_project 8 115597369 115644355 + MGP_BALBcJ_P0090608 Gan protein_coding protein_coding MGP_BALBcJ_T0090609.1 MGP_BALBcJ_G0034146.1 mouse_genomes_project 8 115597371 115655160 + MGP_BALBcJ_P0090609 Gan protein_coding protein_coding MGP_BALBcJ_T0089217.1 MGP_BALBcJ_G0033681.1 mouse_genomes_project 8 67946688 67968533 - MGP_BALBcJ_P0089217 Upf1 protein_coding protein_coding MGP_BALBcJ_T0089218.1 MGP_BALBcJ_G0033681.1 mouse_genomes_project 8 67947549 67968275 - MGP_BALBcJ_P0089218 Upf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0102835.1 MGP_BALBcJ_G0040650.1 mouse_genomes_project 8 16351509 16353988 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010993.1 MGP_BALBcJ_G0009118.1 mouse_genomes_project 8 109302497 109302578 - Mir3473d miRNA miRNA MGP_BALBcJ_T0010998.1 MGP_BALBcJ_G0009123.1 mouse_genomes_project 8 115896004 115896061 + Mir7077 miRNA miRNA MGP_BALBcJ_T0090184.1 MGP_BALBcJ_G0033990.1 mouse_genomes_project 8 102764719 102767975 - MGP_BALBcJ_P0090184 Rrad protein_coding protein_coding MGP_BALBcJ_T0090937.1 MGP_BALBcJ_G0034231.1 mouse_genomes_project 8 122062866 122074232 - MGP_BALBcJ_P0090937 Dbndd1 protein_coding protein_coding MGP_BALBcJ_T0090938.1 MGP_BALBcJ_G0034231.1 mouse_genomes_project 8 122063835 122074167 - MGP_BALBcJ_P0090938 Dbndd1 protein_coding protein_coding MGP_BALBcJ_T0090939.1 MGP_BALBcJ_G0034231.1 mouse_genomes_project 8 122063835 122074240 - MGP_BALBcJ_P0090939 Dbndd1 protein_coding protein_coding MGP_BALBcJ_T0089332.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69011568 69019347 - Nr2f6 protein_coding processed_transcript MGP_BALBcJ_T0089333.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69011572 69019401 - MGP_BALBcJ_P0089333 Nr2f6 protein_coding protein_coding MGP_BALBcJ_T0089334.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69012079 69013242 - Nr2f6 protein_coding processed_transcript MGP_BALBcJ_T0089335.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69012104 69013242 - Nr2f6 protein_coding processed_transcript MGP_BALBcJ_T0089336.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69012569 69013242 - Nr2f6 protein_coding processed_transcript MGP_BALBcJ_T0089337.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69013203 69018350 - Nr2f6 protein_coding processed_transcript MGP_BALBcJ_T0089338.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69013203 69018531 - MGP_BALBcJ_P0089338 Nr2f6 protein_coding protein_coding MGP_BALBcJ_T0089339.1 MGP_BALBcJ_G0033720.1 mouse_genomes_project 8 69013270 69018618 - MGP_BALBcJ_P0089339 Nr2f6 protein_coding protein_coding MGP_BALBcJ_T0100120.1 MGP_BALBcJ_G0038156.1 mouse_genomes_project 8 40201186 40201292 + Gm26181 snRNA snRNA MGP_BALBcJ_T0090011.1 MGP_BALBcJ_G0033926.1 mouse_genomes_project 8 91787006 91805491 - MGP_BALBcJ_P0090011 Nudt21 protein_coding protein_coding MGP_BALBcJ_T0090835.1 MGP_BALBcJ_G0034206.1 mouse_genomes_project 8 121106927 121140999 - MGP_BALBcJ_P0090835 Galns protein_coding protein_coding MGP_BALBcJ_T0089673.1 MGP_BALBcJ_G0033834.1 mouse_genomes_project 8 81822963 81825794 - MGP_BALBcJ_P0089673 Nanos3 protein_coding protein_coding MGP_BALBcJ_T0002332.1 MGP_BALBcJ_G0002242.1 mouse_genomes_project 8 105346782 105347565 + TEC TEC MGP_BALBcJ_T0089804.1 MGP_BALBcJ_G0033865.1 mouse_genomes_project 8 82721042 82741596 + MGP_BALBcJ_P0089804 Tnpo2 protein_coding protein_coding MGP_BALBcJ_T0089805.1 MGP_BALBcJ_G0033865.1 mouse_genomes_project 8 82721295 82741596 + MGP_BALBcJ_P0089805 Tnpo2 protein_coding protein_coding MGP_BALBcJ_T0089806.1 MGP_BALBcJ_G0033865.1 mouse_genomes_project 8 82722518 82741600 + MGP_BALBcJ_P0089806 Tnpo2 protein_coding unknown_likely_coding MGP_BALBcJ_T0018458.1 MGP_BALBcJ_G0015666.1 mouse_genomes_project 8 120899202 120901602 + Gm20681 processed_transcript processed_transcript MGP_BALBcJ_T0088846.1 MGP_BALBcJ_G0033575.1 mouse_genomes_project 8 45013240 45058613 - MGP_BALBcJ_P0088846 Trappc11 protein_coding protein_coding MGP_BALBcJ_T0088847.1 MGP_BALBcJ_G0033575.1 mouse_genomes_project 8 45013253 45050104 - Trappc11 protein_coding retained_intron MGP_BALBcJ_T0088848.1 MGP_BALBcJ_G0033575.1 mouse_genomes_project 8 45013254 45058616 - Trappc11 protein_coding retained_intron MGP_BALBcJ_T0088849.1 MGP_BALBcJ_G0033575.1 mouse_genomes_project 8 45027191 45034295 - MGP_BALBcJ_P0088849 Trappc11 protein_coding protein_coding MGP_BALBcJ_T0088850.1 MGP_BALBcJ_G0033575.1 mouse_genomes_project 8 45049743 45053117 - Trappc11 protein_coding retained_intron MGP_BALBcJ_T0009085.1 MGP_BALBcJ_G0007305.1 mouse_genomes_project 8 58537858 58543478 + lincRNA lincRNA MGP_BALBcJ_T0088335.1 MGP_BALBcJ_G0033397.1 mouse_genomes_project 8 16227007 16229789 + MGP_BALBcJ_P0088335 Defb4 protein_coding protein_coding MGP_BALBcJ_T0089067.1 MGP_BALBcJ_G0033642.1 mouse_genomes_project 8 66603202 66661191 - MGP_BALBcJ_P0089067 Slc18a1 protein_coding protein_coding MGP_BALBcJ_T0089068.1 MGP_BALBcJ_G0033642.1 mouse_genomes_project 8 66632239 66647078 - Slc18a1 protein_coding retained_intron MGP_BALBcJ_T0089069.1 MGP_BALBcJ_G0033642.1 mouse_genomes_project 8 66637300 66645355 - Slc18a1 protein_coding retained_intron MGP_BALBcJ_T0089070.1 MGP_BALBcJ_G0033642.1 mouse_genomes_project 8 66644947 66661204 - Slc18a1 protein_coding processed_transcript MGP_BALBcJ_T0089071.1 MGP_BALBcJ_G0033642.1 mouse_genomes_project 8 66645015 66661178 - Slc18a1 protein_coding processed_transcript MGP_BALBcJ_T0090985.1 MGP_BALBcJ_G0034249.1 mouse_genomes_project 8 123290616 123302449 + MGP_BALBcJ_P0090985 Arv1 protein_coding protein_coding MGP_BALBcJ_T0088344.1 MGP_BALBcJ_G0033405.1 mouse_genomes_project 8 18183760 18185599 - MGP_BALBcJ_P0088344 Gm15056 protein_coding protein_coding MGP_BALBcJ_T0088345.1 MGP_BALBcJ_G0033405.1 mouse_genomes_project 8 18183760 18185128 - MGP_BALBcJ_P0088345 Gm15056 protein_coding protein_coding MGP_BALBcJ_T0090012.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91805667 91836471 + MGP_BALBcJ_P0090012 Ogfod1 protein_coding protein_coding MGP_BALBcJ_T0090013.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91805707 91836471 + MGP_BALBcJ_P0090013 Ogfod1 protein_coding protein_coding MGP_BALBcJ_T0090014.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91805729 91807922 + Ogfod1 protein_coding retained_intron MGP_BALBcJ_T0090015.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91805732 91826329 + Ogfod1 protein_coding processed_transcript MGP_BALBcJ_T0090016.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91805760 91836471 + MGP_BALBcJ_P0090016 Ogfod1 protein_coding protein_coding MGP_BALBcJ_T0090017.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91805765 91824661 + Ogfod1 protein_coding processed_transcript MGP_BALBcJ_T0090018.1 MGP_BALBcJ_G0033927.1 mouse_genomes_project 8 91823608 91826330 + Ogfod1 protein_coding retained_intron MGP_BALBcJ_T0015990.1 MGP_BALBcJ_G0014087.1 mouse_genomes_project 8 126180546 126180981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088557.1 MGP_BALBcJ_G0033478.1 mouse_genomes_project 8 24501753 24506554 - MGP_BALBcJ_P0088557 Brf2 protein_coding protein_coding MGP_BALBcJ_T0090656.1 MGP_BALBcJ_G0034167.1 mouse_genomes_project 8 118297153 118328755 - MGP_BALBcJ_P0090656 Cotl1 protein_coding protein_coding MGP_BALBcJ_T0090657.1 MGP_BALBcJ_G0034167.1 mouse_genomes_project 8 118297153 118328812 - MGP_BALBcJ_P0090657 Cotl1 protein_coding protein_coding MGP_BALBcJ_T0090797.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120901766 120942809 + MGP_BALBcJ_P0090797 Zc3h18 protein_coding protein_coding MGP_BALBcJ_T0090798.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120901800 120942810 + MGP_BALBcJ_P0090798 Zc3h18 protein_coding protein_coding MGP_BALBcJ_T0090799.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120901801 120908877 + MGP_BALBcJ_P0090799 Zc3h18 protein_coding protein_coding MGP_BALBcJ_T0090800.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120901805 120914896 + Zc3h18 protein_coding retained_intron MGP_BALBcJ_T0090801.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120901838 120942809 + MGP_BALBcJ_P0090801 Zc3h18 protein_coding protein_coding MGP_BALBcJ_T0090802.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120928399 120931249 + Zc3h18 protein_coding processed_transcript MGP_BALBcJ_T0090803.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120928469 120936525 + MGP_BALBcJ_P0090803 Zc3h18 protein_coding protein_coding MGP_BALBcJ_T0090804.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120932964 120942809 + Zc3h18 protein_coding retained_intron MGP_BALBcJ_T0090805.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120933139 120936026 + Zc3h18 protein_coding retained_intron MGP_BALBcJ_T0090806.1 MGP_BALBcJ_G0034196.1 mouse_genomes_project 8 120936446 120941370 + MGP_BALBcJ_P0090806 Zc3h18 protein_coding protein_coding MGP_BALBcJ_T0089580.1 MGP_BALBcJ_G0033799.1 mouse_genomes_project 8 79959584 80030290 - MGP_BALBcJ_P0089580 Il15 protein_coding protein_coding MGP_BALBcJ_T0009060.1 MGP_BALBcJ_G0007284.1 mouse_genomes_project 8 24182790 24192608 - lincRNA lincRNA MGP_BALBcJ_T0090442.1 MGP_BALBcJ_G0034091.1 mouse_genomes_project 8 108295052 108305308 - MGP_BALBcJ_P0090442 Chst4 protein_coding protein_coding MGP_BALBcJ_T0090807.1 MGP_BALBcJ_G0034197.1 mouse_genomes_project 8 120947467 120949081 + MGP_BALBcJ_P0090807 Il17c protein_coding protein_coding MGP_BALBcJ_T0089027.1 MGP_BALBcJ_G0033629.1 mouse_genomes_project 8 64016231 64026349 - MGP_BALBcJ_P0089027 Tma16 protein_coding protein_coding MGP_BALBcJ_T0089028.1 MGP_BALBcJ_G0033629.1 mouse_genomes_project 8 64022224 64026360 - Tma16 protein_coding retained_intron MGP_BALBcJ_T0011703.1 MGP_BALBcJ_G0009828.1 mouse_genomes_project 8 81392370 81392656 + Gm22024 misc_RNA misc_RNA MGP_BALBcJ_T0088206.1 MGP_BALBcJ_G0033352.1 mouse_genomes_project 8 10162538 10190702 - MGP_BALBcJ_P0088206 Pcid2 protein_coding protein_coding MGP_BALBcJ_T0088207.1 MGP_BALBcJ_G0033352.1 mouse_genomes_project 8 10162538 10190702 - MGP_BALBcJ_P0088207 Pcid2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088208.1 MGP_BALBcJ_G0033352.1 mouse_genomes_project 8 10165073 10172040 - Pcid2 protein_coding processed_transcript MGP_BALBcJ_T0088209.1 MGP_BALBcJ_G0033352.1 mouse_genomes_project 8 10165245 10190074 - Pcid2 protein_coding processed_transcript MGP_BALBcJ_T0088210.1 MGP_BALBcJ_G0033352.1 mouse_genomes_project 8 10170681 10183982 - MGP_BALBcJ_P0088210 Pcid2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088211.1 MGP_BALBcJ_G0033352.1 mouse_genomes_project 8 10170730 10190064 - MGP_BALBcJ_P0088211 Pcid2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088755.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43013302 43335798 + MGP_BALBcJ_P0088755 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088756.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43013308 43286137 + Sorbs2 protein_coding retained_intron MGP_BALBcJ_T0088757.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43013312 43303351 + MGP_BALBcJ_P0088757 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088758.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43013332 43284668 + MGP_BALBcJ_P0088758 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088759.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43134978 43253373 + MGP_BALBcJ_P0088759 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088760.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43135205 43253395 + MGP_BALBcJ_P0088760 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088761.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43135418 43156509 + Sorbs2 protein_coding processed_transcript MGP_BALBcJ_T0088762.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43135434 43254198 + MGP_BALBcJ_P0088762 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088763.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43165699 43329080 + MGP_BALBcJ_P0088763 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088764.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43166077 43284668 + MGP_BALBcJ_P0088764 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088765.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43166083 43335795 + MGP_BALBcJ_P0088765 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088766.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43166103 43253232 + Sorbs2 protein_coding retained_intron MGP_BALBcJ_T0088767.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43166116 43254155 + MGP_BALBcJ_P0088767 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088768.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43166191 43249985 + Sorbs2 protein_coding retained_intron MGP_BALBcJ_T0088769.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43166211 43280451 + MGP_BALBcJ_P0088769 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088770.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43169400 43266623 + MGP_BALBcJ_P0088770 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088771.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43195613 43266672 + MGP_BALBcJ_P0088771 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088772.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43195617 43266632 + MGP_BALBcJ_P0088772 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088773.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43240308 43335804 + MGP_BALBcJ_P0088773 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088774.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43271099 43335796 + MGP_BALBcJ_P0088774 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088775.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43271833 43307680 + Sorbs2 protein_coding processed_transcript MGP_BALBcJ_T0088776.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43277636 43300828 + MGP_BALBcJ_P0088776 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088777.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43278352 43300796 + MGP_BALBcJ_P0088777 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088778.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43280151 43283691 + Sorbs2 protein_coding retained_intron MGP_BALBcJ_T0088779.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43283466 43303025 + MGP_BALBcJ_P0088779 Sorbs2 protein_coding protein_coding MGP_BALBcJ_T0088780.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43311146 43311858 + Sorbs2 protein_coding retained_intron MGP_BALBcJ_T0088781.1 MGP_BALBcJ_G0033556.1 mouse_genomes_project 8 43313742 43315306 + Sorbs2 protein_coding processed_transcript MGP_BALBcJ_T0090266.1 MGP_BALBcJ_G0034021.1 mouse_genomes_project 8 103631340 103643086 - MGP_BALBcJ_P0090266 Zdhhc1 protein_coding protein_coding MGP_BALBcJ_T0005364.1 MGP_BALBcJ_G0004547.1 mouse_genomes_project 8 108124299 108132936 - Gm17344 antisense antisense MGP_BALBcJ_T0005365.1 MGP_BALBcJ_G0004547.1 mouse_genomes_project 8 108126040 108132959 - Gm17344 antisense antisense MGP_BALBcJ_T0005378.1 MGP_BALBcJ_G0004560.1 mouse_genomes_project 8 120430156 120432140 + BC048644 antisense antisense MGP_BALBcJ_T0005379.1 MGP_BALBcJ_G0004560.1 mouse_genomes_project 8 120430156 120440212 + BC048644 antisense antisense MGP_BALBcJ_T0002322.1 MGP_BALBcJ_G0002233.1 mouse_genomes_project 8 10372247 10374362 - TEC TEC MGP_BALBcJ_T0089032.1 MGP_BALBcJ_G0033632.1 mouse_genomes_project 8 64222774 64232145 + MGP_BALBcJ_P0089032 Npy1r protein_coding protein_coding MGP_BALBcJ_T0015958.1 MGP_BALBcJ_G0014055.1 mouse_genomes_project 8 72849905 72850746 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090811.1 MGP_BALBcJ_G0034201.1 mouse_genomes_project 8 120992252 121002161 - MGP_BALBcJ_P0090811 Rnf166 protein_coding protein_coding MGP_BALBcJ_T0090812.1 MGP_BALBcJ_G0034201.1 mouse_genomes_project 8 120992966 120994332 - Rnf166 protein_coding retained_intron MGP_BALBcJ_T0090813.1 MGP_BALBcJ_G0034201.1 mouse_genomes_project 8 120994113 121001785 - Rnf166 protein_coding processed_transcript MGP_BALBcJ_T0090045.1 MGP_BALBcJ_G0033938.1 mouse_genomes_project 8 92352824 92379801 - MGP_BALBcJ_P0090045 Fam192a protein_coding protein_coding MGP_BALBcJ_T0011706.1 MGP_BALBcJ_G0009831.1 mouse_genomes_project 8 92470926 92471196 - Gm22846 misc_RNA misc_RNA MGP_BALBcJ_T0088424.1 MGP_BALBcJ_G0033439.1 mouse_genomes_project 8 20494931 20530480 - MGP_BALBcJ_P0088424 Gpat4 protein_coding protein_coding MGP_BALBcJ_T0088116.1 MGP_BALBcJ_G0033326.1 mouse_genomes_project 8 6893634 6899652 + MGP_BALBcJ_P0088116 Gm10217 protein_coding protein_coding MGP_BALBcJ_T0005369.1 MGP_BALBcJ_G0004551.1 mouse_genomes_project 8 112722984 112732992 - 4933408N05Rik antisense antisense MGP_BALBcJ_T0009161.1 MGP_BALBcJ_G0007358.1 mouse_genomes_project 8 118690920 118715296 - A330074K22Rik lincRNA lincRNA MGP_BALBcJ_T0090113.1 MGP_BALBcJ_G0033962.1 mouse_genomes_project 8 93216669 93259279 - MGP_BALBcJ_P0090113 Csnk2a2 protein_coding protein_coding MGP_BALBcJ_T0010941.1 MGP_BALBcJ_G0009066.1 mouse_genomes_project 8 33144908 33145035 - Gm44474 miRNA miRNA MGP_BALBcJ_T0089492.1 MGP_BALBcJ_G0033770.1 mouse_genomes_project 8 72615443 72655724 + MGP_BALBcJ_P0089492 Tom1 protein_coding protein_coding MGP_BALBcJ_T0089493.1 MGP_BALBcJ_G0033770.1 mouse_genomes_project 8 72615443 72655724 + MGP_BALBcJ_P0089493 Tom1 protein_coding protein_coding MGP_BALBcJ_T0089544.1 MGP_BALBcJ_G0033788.1 mouse_genomes_project 8 76920075 76981195 - MGP_BALBcJ_P0089544 Smad1 protein_coding protein_coding MGP_BALBcJ_T0089545.1 MGP_BALBcJ_G0033788.1 mouse_genomes_project 8 76923254 76981195 - MGP_BALBcJ_P0089545 Smad1 protein_coding protein_coding MGP_BALBcJ_T0089546.1 MGP_BALBcJ_G0033788.1 mouse_genomes_project 8 76937030 76981195 - MGP_BALBcJ_P0089546 Smad1 protein_coding protein_coding MGP_BALBcJ_T0090496.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109351579 109375492 - MGP_BALBcJ_P0090496 Clec18a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090497.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109351579 109375492 - MGP_BALBcJ_P0090497 Clec18a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090498.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109351579 109375492 - MGP_BALBcJ_P0090498 Clec18a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090499.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109362600 109375266 - MGP_BALBcJ_P0090499 Clec18a protein_coding protein_coding MGP_BALBcJ_T0090500.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109362600 109375492 - MGP_BALBcJ_P0090500 Clec18a protein_coding protein_coding MGP_BALBcJ_T0090501.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109362601 109375492 - MGP_BALBcJ_P0090501 Clec18a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090502.1 MGP_BALBcJ_G0034108.1 mouse_genomes_project 8 109362601 109384071 - MGP_BALBcJ_P0090502 Clec18a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088690.1 MGP_BALBcJ_G0033530.1 mouse_genomes_project 8 37905818 37949096 + MGP_BALBcJ_P0088690 Vps37a protein_coding protein_coding MGP_BALBcJ_T0088637.1 MGP_BALBcJ_G0033512.1 mouse_genomes_project 8 32167987 32304837 - MGP_BALBcJ_P0088637 Tnks protein_coding protein_coding MGP_BALBcJ_T0090052.1 MGP_BALBcJ_G0033942.1 mouse_genomes_project 8 92518362 92524440 + MGP_BALBcJ_P0090052 Ccl22 protein_coding protein_coding MGP_BALBcJ_T0090053.1 MGP_BALBcJ_G0033942.1 mouse_genomes_project 8 92518452 92522614 + Ccl22 protein_coding processed_transcript MGP_BALBcJ_T0089456.1 MGP_BALBcJ_G0033756.1 mouse_genomes_project 8 70011806 70095700 - MGP_BALBcJ_P0089456 Eps15l1 protein_coding protein_coding MGP_BALBcJ_T0010976.1 MGP_BALBcJ_G0009101.1 mouse_genomes_project 8 86755088 86755192 + Mir8110 miRNA miRNA MGP_BALBcJ_T0090146.1 MGP_BALBcJ_G0033972.1 mouse_genomes_project 8 100612294 100784024 - MGP_BALBcJ_P0090146 Cdh11 protein_coding protein_coding MGP_BALBcJ_T0100158.1 MGP_BALBcJ_G0038194.1 mouse_genomes_project 8 121046364 121046471 - Gm26497 snRNA snRNA MGP_BALBcJ_T0090887.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121798820 121810716 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0090888.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121798820 121810670 - MGP_BALBcJ_P0090888 Vps9d1 protein_coding protein_coding MGP_BALBcJ_T0090889.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121798820 121810842 - MGP_BALBcJ_P0090889 Vps9d1 protein_coding protein_coding MGP_BALBcJ_T0090890.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121798822 121810657 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0090891.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121798822 121810603 - MGP_BALBcJ_P0090891 Vps9d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090892.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121798823 121810586 - MGP_BALBcJ_P0090892 Vps9d1 protein_coding protein_coding MGP_BALBcJ_T0090893.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121801404 121810599 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0090894.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121801600 121803388 - Vps9d1 protein_coding processed_transcript MGP_BALBcJ_T0090895.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121802973 121804454 - Vps9d1 protein_coding processed_transcript MGP_BALBcJ_T0090896.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121803314 121804471 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0090897.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121805015 121805446 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0090898.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121805290 121807526 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0090899.1 MGP_BALBcJ_G0034222.1 mouse_genomes_project 8 121806166 121810544 - Vps9d1 protein_coding retained_intron MGP_BALBcJ_T0088668.1 MGP_BALBcJ_G0033526.1 mouse_genomes_project 8 37676807 37684534 - MGP_BALBcJ_P0088668 Fgf20 protein_coding protein_coding MGP_BALBcJ_T0088669.1 MGP_BALBcJ_G0033526.1 mouse_genomes_project 8 37677366 37713600 - MGP_BALBcJ_P0088669 Fgf20 protein_coding protein_coding MGP_BALBcJ_T0089979.1 MGP_BALBcJ_G0033918.1 mouse_genomes_project 8 90935621 90969903 - MGP_BALBcJ_P0089979 Ces1d protein_coding protein_coding MGP_BALBcJ_T0089980.1 MGP_BALBcJ_G0033918.1 mouse_genomes_project 8 90935856 90939474 - Ces1d protein_coding processed_transcript MGP_BALBcJ_T0089981.1 MGP_BALBcJ_G0033918.1 mouse_genomes_project 8 90935882 90945124 - Ces1d protein_coding processed_transcript MGP_BALBcJ_T0089982.1 MGP_BALBcJ_G0033918.1 mouse_genomes_project 8 90966869 90969842 - Ces1d protein_coding processed_transcript MGP_BALBcJ_T0089175.1 MGP_BALBcJ_G0033675.1 mouse_genomes_project 8 67836795 67849708 - MGP_BALBcJ_P0089175 Armc6 protein_coding protein_coding MGP_BALBcJ_T0089176.1 MGP_BALBcJ_G0033675.1 mouse_genomes_project 8 67836821 67839435 - Armc6 protein_coding retained_intron MGP_BALBcJ_T0089177.1 MGP_BALBcJ_G0033675.1 mouse_genomes_project 8 67837100 67838907 - Armc6 protein_coding retained_intron MGP_BALBcJ_T0089178.1 MGP_BALBcJ_G0033675.1 mouse_genomes_project 8 67839831 67841823 - Armc6 protein_coding retained_intron MGP_BALBcJ_T0089179.1 MGP_BALBcJ_G0033675.1 mouse_genomes_project 8 67841255 67849691 - Armc6 protein_coding retained_intron MGP_BALBcJ_T0089180.1 MGP_BALBcJ_G0033675.1 mouse_genomes_project 8 67841963 67849362 - MGP_BALBcJ_P0089180 Armc6 protein_coding protein_coding MGP_BALBcJ_T0090407.1 MGP_BALBcJ_G0034077.1 mouse_genomes_project 8 106949065 107050511 + MGP_BALBcJ_P0090407 Zfhx3 protein_coding protein_coding MGP_BALBcJ_T0090408.1 MGP_BALBcJ_G0034077.1 mouse_genomes_project 8 106960591 107213347 + MGP_BALBcJ_P0090408 Zfhx3 protein_coding protein_coding MGP_BALBcJ_T0009057.1 MGP_BALBcJ_G0007281.1 mouse_genomes_project 8 19715060 19715936 + 1810012K16Rik lincRNA lincRNA MGP_BALBcJ_T0088240.1 MGP_BALBcJ_G0033364.1 mouse_genomes_project 8 10645058 10656783 - MGP_BALBcJ_P0088240 1700029H14Rik protein_coding protein_coding MGP_BALBcJ_T0088241.1 MGP_BALBcJ_G0033364.1 mouse_genomes_project 8 10645058 10656770 - MGP_BALBcJ_P0088241 1700029H14Rik protein_coding protein_coding MGP_BALBcJ_T0088242.1 MGP_BALBcJ_G0033364.1 mouse_genomes_project 8 10645336 10656727 - MGP_BALBcJ_P0088242 1700029H14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088243.1 MGP_BALBcJ_G0033364.1 mouse_genomes_project 8 10645357 10656726 - MGP_BALBcJ_P0088243 1700029H14Rik protein_coding protein_coding MGP_BALBcJ_T0088244.1 MGP_BALBcJ_G0033364.1 mouse_genomes_project 8 10650280 10656727 - MGP_BALBcJ_P0088244 1700029H14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011692.1 MGP_BALBcJ_G0009817.1 mouse_genomes_project 8 4553112 4553314 + Gm27545 misc_RNA misc_RNA MGP_BALBcJ_T0009092.1 MGP_BALBcJ_G0007311.1 mouse_genomes_project 8 69814832 69818268 - Gm26586 lincRNA lincRNA MGP_BALBcJ_T0011687.1 MGP_BALBcJ_G0009812.1 mouse_genomes_project 8 555892 556219 + Gm22204 misc_RNA misc_RNA MGP_BALBcJ_T0089269.1 MGP_BALBcJ_G0033696.1 mouse_genomes_project 8 68284404 68297792 - MGP_BALBcJ_P0089269 Pgpep1 protein_coding protein_coding MGP_BALBcJ_T0090538.1 MGP_BALBcJ_G0034117.1 mouse_genomes_project 8 109954212 109991562 + MGP_BALBcJ_P0090538 Zfp1 protein_coding protein_coding MGP_BALBcJ_T0088666.1 MGP_BALBcJ_G0033525.1 mouse_genomes_project 8 36990918 37053540 - MGP_BALBcJ_P0088666 Msr1 protein_coding protein_coding MGP_BALBcJ_T0088667.1 MGP_BALBcJ_G0033525.1 mouse_genomes_project 8 37012649 37053540 - MGP_BALBcJ_P0088667 Msr1 protein_coding protein_coding MGP_BALBcJ_T0089275.1 MGP_BALBcJ_G0033700.1 mouse_genomes_project 8 68356429 68360603 + MGP_BALBcJ_P0089275 Gm3336 protein_coding protein_coding MGP_BALBcJ_T0090612.1 MGP_BALBcJ_G0034148.1 mouse_genomes_project 8 115948442 116089026 + MGP_BALBcJ_P0090612 Plcg2 protein_coding protein_coding MGP_BALBcJ_T0088251.1 MGP_BALBcJ_G0033367.1 mouse_genomes_project 8 10843207 10867240 + MGP_BALBcJ_P0088251 Cdc16 protein_coding protein_coding MGP_BALBcJ_T0088252.1 MGP_BALBcJ_G0033367.1 mouse_genomes_project 8 10843208 10848539 + Cdc16 protein_coding processed_transcript MGP_BALBcJ_T0088253.1 MGP_BALBcJ_G0033367.1 mouse_genomes_project 8 10843246 10852007 + Cdc16 protein_coding processed_transcript MGP_BALBcJ_T0088254.1 MGP_BALBcJ_G0033367.1 mouse_genomes_project 8 10844298 10848542 + Cdc16 protein_coding retained_intron MGP_BALBcJ_T0088255.1 MGP_BALBcJ_G0033367.1 mouse_genomes_project 8 10864303 10867240 + Cdc16 protein_coding retained_intron MGP_BALBcJ_T0090998.1 MGP_BALBcJ_G0034256.1 mouse_genomes_project 8 123468458 123508835 - MGP_BALBcJ_P0090998 Egln1 protein_coding protein_coding MGP_BALBcJ_T0089816.1 MGP_BALBcJ_G0033867.1 mouse_genomes_project 8 82751450 82751865 - MGP_BALBcJ_P0089816 Gm5741 protein_coding protein_coding MGP_BALBcJ_T0101428.1 MGP_BALBcJ_G0039464.1 mouse_genomes_project 8 116579468 116579598 + Gm25200 snoRNA snoRNA MGP_BALBcJ_T0088361.1 MGP_BALBcJ_G0033419.1 mouse_genomes_project 8 19374836 19385742 + MGP_BALBcJ_P0088361 Alg11 protein_coding protein_coding MGP_BALBcJ_T0088362.1 MGP_BALBcJ_G0033419.1 mouse_genomes_project 8 19374837 19385742 + MGP_BALBcJ_P0088362 Alg11 protein_coding protein_coding MGP_BALBcJ_T0088363.1 MGP_BALBcJ_G0033419.1 mouse_genomes_project 8 19374855 19379563 + MGP_BALBcJ_P0088363 Alg11 protein_coding protein_coding MGP_BALBcJ_T0088364.1 MGP_BALBcJ_G0033419.1 mouse_genomes_project 8 19383130 19383994 + Alg11 protein_coding processed_transcript MGP_BALBcJ_T0015923.1 MGP_BALBcJ_G0014020.1 mouse_genomes_project 8 16068337 16073092 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088442.1 MGP_BALBcJ_G0033448.1 mouse_genomes_project 8 21946719 22036625 - MGP_BALBcJ_P0088442 Adam18 protein_coding protein_coding MGP_BALBcJ_T0088443.1 MGP_BALBcJ_G0033448.1 mouse_genomes_project 8 21946719 22036625 - MGP_BALBcJ_P0088443 Adam18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088444.1 MGP_BALBcJ_G0033448.1 mouse_genomes_project 8 21946723 21971518 - Adam18 protein_coding processed_transcript MGP_BALBcJ_T0090361.1 MGP_BALBcJ_G0034063.1 mouse_genomes_project 8 105104604 105132358 + MGP_BALBcJ_P0090361 Cirh1a protein_coding protein_coding MGP_BALBcJ_T0005384.1 MGP_BALBcJ_G0004565.1 mouse_genomes_project 8 122888427 122895770 - Gm15775 antisense antisense MGP_BALBcJ_T0010925.1 MGP_BALBcJ_G0009050.1 mouse_genomes_project 8 6797008 6797161 - miRNA miRNA MGP_BALBcJ_T0090701.1 MGP_BALBcJ_G0034176.1 mouse_genomes_project 8 119106782 119133278 - MGP_BALBcJ_P0090701 1190005I06Rik protein_coding protein_coding MGP_BALBcJ_T0090703.1 MGP_BALBcJ_G0034176.1 mouse_genomes_project 8 119106981 119146616 - MGP_BALBcJ_P0090703 1190005I06Rik protein_coding protein_coding MGP_BALBcJ_T0090704.1 MGP_BALBcJ_G0034176.1 mouse_genomes_project 8 119107115 119133149 - MGP_BALBcJ_P0090704 1190005I06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005375.1 MGP_BALBcJ_G0004557.1 mouse_genomes_project 8 118520676 118529778 - Gm15684 antisense antisense MGP_BALBcJ_T0090839.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121158828 121181545 - MGP_BALBcJ_P0090839 Cbfa2t3 protein_coding unknown_likely_coding MGP_BALBcJ_T0090840.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121158834 121229885 - MGP_BALBcJ_P0090840 Cbfa2t3 protein_coding protein_coding MGP_BALBcJ_T0090841.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121159559 121209091 - MGP_BALBcJ_P0090841 Cbfa2t3 protein_coding protein_coding MGP_BALBcJ_T0090842.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121160034 121209194 - MGP_BALBcJ_P0090842 Cbfa2t3 protein_coding protein_coding MGP_BALBcJ_T0090843.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121169089 121209713 - MGP_BALBcJ_P0090843 Cbfa2t3 protein_coding protein_coding MGP_BALBcJ_T0090844.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121169093 121176974 - Cbfa2t3 protein_coding processed_transcript MGP_BALBcJ_T0090845.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121173079 121209130 - Cbfa2t3 protein_coding processed_transcript MGP_BALBcJ_T0090846.1 MGP_BALBcJ_G0034210.1 mouse_genomes_project 8 121181122 121229678 - Cbfa2t3 protein_coding retained_intron MGP_BALBcJ_T0090900.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121810688 121826320 + MGP_BALBcJ_P0090900 Zfp276 protein_coding protein_coding MGP_BALBcJ_T0090901.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121810764 121814130 + Zfp276 protein_coding retained_intron MGP_BALBcJ_T0090902.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121810777 121826318 + Zfp276 protein_coding retained_intron MGP_BALBcJ_T0090903.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121811179 121821648 + MGP_BALBcJ_P0090903 Zfp276 protein_coding protein_coding MGP_BALBcJ_T0090904.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121814814 121824705 + Zfp276 protein_coding retained_intron MGP_BALBcJ_T0090905.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121815946 121824500 + Zfp276 protein_coding retained_intron MGP_BALBcJ_T0090906.1 MGP_BALBcJ_G0034223.1 mouse_genomes_project 8 121821398 121822221 + Zfp276 protein_coding retained_intron MGP_BALBcJ_T0089093.1 MGP_BALBcJ_G0033650.1 mouse_genomes_project 8 67248610 67256708 + Zfp964 protein_coding retained_intron MGP_BALBcJ_T0089094.1 MGP_BALBcJ_G0033650.1 mouse_genomes_project 8 67248623 67261211 + MGP_BALBcJ_P0089094 Zfp964 protein_coding protein_coding MGP_BALBcJ_T0089095.1 MGP_BALBcJ_G0033650.1 mouse_genomes_project 8 67253092 67257989 + MGP_BALBcJ_P0089095 Zfp964 protein_coding protein_coding MGP_BALBcJ_T0088746.1 MGP_BALBcJ_G0033551.1 mouse_genomes_project 8 42749267 42769484 - MGP_BALBcJ_P0088746 F11 protein_coding protein_coding MGP_BALBcJ_T0009143.1 MGP_BALBcJ_G0007345.1 mouse_genomes_project 8 91517538 91577979 - Gm26843 lincRNA lincRNA MGP_BALBcJ_T0101433.1 MGP_BALBcJ_G0039469.1 mouse_genomes_project 8 125556851 125556985 - Gm26397 snoRNA snoRNA MGP_BALBcJ_T0090340.1 MGP_BALBcJ_G0034053.1 mouse_genomes_project 8 104391846 104402704 - MGP_BALBcJ_P0090340 Slc7a6os protein_coding protein_coding MGP_BALBcJ_T0089857.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83530751 83571117 + Phkb protein_coding processed_transcript MGP_BALBcJ_T0089858.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83530783 83620370 + MGP_BALBcJ_P0089858 Phkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089859.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83530794 83752322 + MGP_BALBcJ_P0089859 Phkb protein_coding protein_coding MGP_BALBcJ_T0089860.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83530800 83606164 + Phkb protein_coding processed_transcript MGP_BALBcJ_T0089861.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83530808 83605898 + MGP_BALBcJ_P0089861 Phkb protein_coding protein_coding MGP_BALBcJ_T0089862.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83532579 83587587 + MGP_BALBcJ_P0089862 Phkb protein_coding protein_coding MGP_BALBcJ_T0089863.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83532843 83571204 + MGP_BALBcJ_P0089863 Phkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089864.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83532853 83751591 + MGP_BALBcJ_P0089864 Phkb protein_coding unknown_likely_coding MGP_BALBcJ_T0089865.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83705777 83719126 + MGP_BALBcJ_P0089865 Phkb protein_coding protein_coding MGP_BALBcJ_T0089866.1 MGP_BALBcJ_G0033882.1 mouse_genomes_project 8 83724378 83751587 + Phkb protein_coding processed_transcript MGP_BALBcJ_T0088121.1 MGP_BALBcJ_G0033329.1 mouse_genomes_project 8 7041420 7069912 + MGP_BALBcJ_P0088121 Tnfsf13b protein_coding protein_coding MGP_BALBcJ_T0010935.1 MGP_BALBcJ_G0009060.1 mouse_genomes_project 8 20420120 20420245 - Gm44365 miRNA miRNA MGP_BALBcJ_T0088700.1 MGP_BALBcJ_G0033535.1 mouse_genomes_project 8 38293986 38357973 + MGP_BALBcJ_P0088700 Slc7a2 protein_coding protein_coding MGP_BALBcJ_T0088701.1 MGP_BALBcJ_G0033535.1 mouse_genomes_project 8 38294152 38332562 + MGP_BALBcJ_P0088701 Slc7a2 protein_coding protein_coding MGP_BALBcJ_T0088702.1 MGP_BALBcJ_G0033535.1 mouse_genomes_project 8 38330371 38354980 + MGP_BALBcJ_P0088702 Slc7a2 protein_coding unknown_likely_coding MGP_BALBcJ_T0088703.1 MGP_BALBcJ_G0033535.1 mouse_genomes_project 8 38332015 38351543 + MGP_BALBcJ_P0088703 Slc7a2 protein_coding protein_coding MGP_BALBcJ_T0090367.1 MGP_BALBcJ_G0034067.1 mouse_genomes_project 8 105266708 105279666 - MGP_BALBcJ_P0090367 Cog8 protein_coding protein_coding MGP_BALBcJ_T0090368.1 MGP_BALBcJ_G0034067.1 mouse_genomes_project 8 105266714 105279661 - MGP_BALBcJ_P0090368 Cog8 protein_coding protein_coding MGP_BALBcJ_T0090370.1 MGP_BALBcJ_G0034067.1 mouse_genomes_project 8 105275658 105277238 - Cog8 protein_coding retained_intron MGP_BALBcJ_T0090371.1 MGP_BALBcJ_G0034067.1 mouse_genomes_project 8 105275888 105279475 - MGP_BALBcJ_P0090371 Cog8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0101411.1 MGP_BALBcJ_G0039447.1 mouse_genomes_project 8 82038984 82039117 - Gm23626 snoRNA snoRNA MGP_BALBcJ_T0090950.1 MGP_BALBcJ_G0034239.1 mouse_genomes_project 8 122521631 122551693 - MGP_BALBcJ_P0090950 Abcb10 protein_coding protein_coding MGP_BALBcJ_T0101420.1 MGP_BALBcJ_G0039456.1 mouse_genomes_project 8 99504042 99504167 - Gm22223 snoRNA snoRNA MGP_BALBcJ_T0090753.1 MGP_BALBcJ_G0034188.1 mouse_genomes_project 8 120128015 120132184 - MGP_BALBcJ_P0090753 Zcchc14 protein_coding protein_coding MGP_BALBcJ_T0090754.1 MGP_BALBcJ_G0034188.1 mouse_genomes_project 8 120129940 120179804 - MGP_BALBcJ_P0090754 Zcchc14 protein_coding protein_coding MGP_BALBcJ_T0090755.1 MGP_BALBcJ_G0034188.1 mouse_genomes_project 8 120133883 120134888 - Zcchc14 protein_coding retained_intron MGP_BALBcJ_T0090756.1 MGP_BALBcJ_G0034188.1 mouse_genomes_project 8 120136251 120156108 - Zcchc14 protein_coding retained_intron MGP_BALBcJ_T0089055.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66355977 66391352 + MGP_BALBcJ_P0089055 Ints10 protein_coding protein_coding MGP_BALBcJ_T0089056.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66355983 66384449 + MGP_BALBcJ_P0089056 Ints10 protein_coding protein_coding MGP_BALBcJ_T0089057.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66356004 66360811 + Ints10 protein_coding retained_intron MGP_BALBcJ_T0089058.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66356004 66391350 + MGP_BALBcJ_P0089058 Ints10 protein_coding protein_coding MGP_BALBcJ_T0089059.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66356022 66360811 + Ints10 protein_coding retained_intron MGP_BALBcJ_T0089060.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66356063 66391350 + MGP_BALBcJ_P0089060 Ints10 protein_coding protein_coding MGP_BALBcJ_T0089061.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66374111 66376761 + Ints10 protein_coding retained_intron MGP_BALBcJ_T0089062.1 MGP_BALBcJ_G0033640.1 mouse_genomes_project 8 66382823 66389460 + MGP_BALBcJ_P0089062 Ints10 protein_coding protein_coding MGP_BALBcJ_T0015917.1 MGP_BALBcJ_G0014014.1 mouse_genomes_project 8 10057303 10057507 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009099.1 MGP_BALBcJ_G0007317.1 mouse_genomes_project 8 78618515 78648432 + lincRNA lincRNA MGP_BALBcJ_T0011712.1 MGP_BALBcJ_G0009837.1 mouse_genomes_project 8 122082038 122082319 + Gm22314 misc_RNA misc_RNA MGP_BALBcJ_T0010970.1 MGP_BALBcJ_G0009095.1 mouse_genomes_project 8 82599233 82599342 - Gm24197 miRNA miRNA MGP_BALBcJ_T0088922.1 MGP_BALBcJ_G0033601.1 mouse_genomes_project 8 55090970 55114634 + MGP_BALBcJ_P0088922 Scrg1 protein_coding protein_coding MGP_BALBcJ_T0090440.1 MGP_BALBcJ_G0034090.1 mouse_genomes_project 8 108256600 108265967 + MGP_BALBcJ_P0090440 Tat protein_coding protein_coding MGP_BALBcJ_T0090441.1 MGP_BALBcJ_G0034090.1 mouse_genomes_project 8 108256669 108260858 + MGP_BALBcJ_P0090441 Tat protein_coding protein_coding MGP_BALBcJ_T0088698.1 MGP_BALBcJ_G0033533.1 mouse_genomes_project 8 38212692 38259866 + MGP_BALBcJ_P0088698 protein_coding protein_coding MGP_BALBcJ_T0090922.1 MGP_BALBcJ_G0034228.1 mouse_genomes_project 8 121970125 121980718 + MGP_BALBcJ_P0090922 Tubb3 protein_coding protein_coding MGP_BALBcJ_T0009077.1 MGP_BALBcJ_G0007297.1 mouse_genomes_project 8 38293969 38297196 - Gm26584 lincRNA lincRNA MGP_BALBcJ_T0090077.1 MGP_BALBcJ_G0033948.1 mouse_genomes_project 8 92633754 92646297 - MGP_BALBcJ_P0090077 Dok4 protein_coding protein_coding MGP_BALBcJ_T0090986.1 MGP_BALBcJ_G0034250.1 mouse_genomes_project 8 123308396 123319917 - MGP_BALBcJ_P0090986 Fam89a protein_coding protein_coding MGP_BALBcJ_T0090410.1 MGP_BALBcJ_G0034079.1 mouse_genomes_project 8 107813342 107830912 - MGP_BALBcJ_P0090410 Dhx38 protein_coding protein_coding MGP_BALBcJ_T0088327.1 MGP_BALBcJ_G0033390.1 mouse_genomes_project 8 16057557 16060696 - MGP_BALBcJ_P0088327 Defb38 protein_coding protein_coding MGP_BALBcJ_T0009109.1 MGP_BALBcJ_G0007326.1 mouse_genomes_project 8 84796717 84804403 + Gm5118 lincRNA lincRNA MGP_BALBcJ_T0090848.1 MGP_BALBcJ_G0034212.1 mouse_genomes_project 8 121380648 121399843 + MGP_BALBcJ_P0090848 Cdh15 protein_coding protein_coding MGP_BALBcJ_T0100161.1 MGP_BALBcJ_G0038197.1 mouse_genomes_project 8 125659138 125659311 + Gm22730 snRNA snRNA MGP_BALBcJ_T0010928.1 MGP_BALBcJ_G0009053.1 mouse_genomes_project 8 10032968 10033098 + Gm38671 miRNA miRNA MGP_BALBcJ_T0088375.1 MGP_BALBcJ_G0033424.1 mouse_genomes_project 8 19542313 19577047 + MGP_BALBcJ_P0088375 Thsd1 protein_coding protein_coding MGP_BALBcJ_T0088376.1 MGP_BALBcJ_G0033424.1 mouse_genomes_project 8 19542345 19576093 + MGP_BALBcJ_P0088376 Thsd1 protein_coding protein_coding MGP_BALBcJ_T0088377.1 MGP_BALBcJ_G0033424.1 mouse_genomes_project 8 19542362 19576091 + Thsd1 protein_coding processed_transcript MGP_BALBcJ_T0089455.1 MGP_BALBcJ_G0033755.1 mouse_genomes_project 8 69987709 69990334 + MGP_BALBcJ_P0089455 Klf2 protein_coding protein_coding MGP_BALBcJ_T0018427.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54936191 54953288 - AV026068 processed_transcript lincRNA MGP_BALBcJ_T0018428.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54936191 54952754 - AV026068 processed_transcript lincRNA MGP_BALBcJ_T0018429.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54936191 54953164 - AV026068 processed_transcript lincRNA MGP_BALBcJ_T0018430.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54936191 54952833 - AV026068 processed_transcript retained_intron MGP_BALBcJ_T0018431.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54936197 54937285 - AV026068 processed_transcript lincRNA MGP_BALBcJ_T0018432.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54937169 54953259 - AV026068 processed_transcript retained_intron MGP_BALBcJ_T0018433.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54938867 54953196 - AV026068 processed_transcript retained_intron MGP_BALBcJ_T0018434.1 MGP_BALBcJ_G0015654.1 mouse_genomes_project 8 54946724 54953177 - AV026068 processed_transcript retained_intron MGP_BALBcJ_T0089348.1 MGP_BALBcJ_G0033725.1 mouse_genomes_project 8 69106836 69107660 + MGP_BALBcJ_P0089348 Mrpl34 protein_coding protein_coding MGP_BALBcJ_T0088495.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22950113 23026315 + MGP_BALBcJ_P0088495 Whsc1l1 protein_coding protein_coding MGP_BALBcJ_T0088496.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22950796 23024017 + Whsc1l1 protein_coding retained_intron MGP_BALBcJ_T0088497.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22950796 23027073 + MGP_BALBcJ_P0088497 Whsc1l1 protein_coding protein_coding MGP_BALBcJ_T0088498.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22950796 23068917 + MGP_BALBcJ_P0088498 Whsc1l1 protein_coding protein_coding MGP_BALBcJ_T0088499.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22950796 23064218 + MGP_BALBcJ_P0088499 Whsc1l1 protein_coding protein_coding MGP_BALBcJ_T0088500.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22950831 23012709 + Whsc1l1 protein_coding retained_intron MGP_BALBcJ_T0088501.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 22988812 23068917 + MGP_BALBcJ_P0088501 Whsc1l1 protein_coding protein_coding MGP_BALBcJ_T0088502.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 23023545 23027051 + Whsc1l1 protein_coding retained_intron MGP_BALBcJ_T0088503.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 23043514 23064218 + MGP_BALBcJ_P0088503 Whsc1l1 protein_coding protein_coding MGP_BALBcJ_T0088504.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 23047915 23057958 + Whsc1l1 protein_coding retained_intron MGP_BALBcJ_T0088505.1 MGP_BALBcJ_G0033459.1 mouse_genomes_project 8 23049345 23050372 + Whsc1l1 protein_coding retained_intron MGP_BALBcJ_T0088205.1 MGP_BALBcJ_G0033351.1 mouse_genomes_project 8 10146424 10160356 + MGP_BALBcJ_P0088205 Proz protein_coding protein_coding MGP_BALBcJ_T0009113.1 MGP_BALBcJ_G0007329.1 mouse_genomes_project 8 84908130 84998916 + Gm27169 lincRNA lincRNA MGP_BALBcJ_T0089480.1 MGP_BALBcJ_G0033767.1 mouse_genomes_project 8 70477689 70991121 - MGP_BALBcJ_P0089480 Large protein_coding protein_coding MGP_BALBcJ_T0089481.1 MGP_BALBcJ_G0033767.1 mouse_genomes_project 8 70477689 70990137 - MGP_BALBcJ_P0089481 Large protein_coding protein_coding MGP_BALBcJ_T0089482.1 MGP_BALBcJ_G0033767.1 mouse_genomes_project 8 70682980 70737910 - Large protein_coding retained_intron MGP_BALBcJ_T0002328.1 MGP_BALBcJ_G0002239.1 mouse_genomes_project 8 83099489 83100119 + TEC TEC MGP_BALBcJ_T0002329.1 MGP_BALBcJ_G0002239.1 mouse_genomes_project 8 83099489 83100127 + TEC TEC MGP_BALBcJ_T0009087.1 MGP_BALBcJ_G0007307.1 mouse_genomes_project 8 62653375 62700230 - lincRNA lincRNA MGP_BALBcJ_T0009084.1 MGP_BALBcJ_G0007304.1 mouse_genomes_project 8 55125082 55147048 + 2500002B13Rik lincRNA lincRNA MGP_BALBcJ_T0090923.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995139 122012644 + MGP_BALBcJ_P0090923 Def8 protein_coding protein_coding MGP_BALBcJ_T0090924.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995139 122015399 + MGP_BALBcJ_P0090924 Def8 protein_coding protein_coding MGP_BALBcJ_T0090925.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995139 122015399 + MGP_BALBcJ_P0090925 Def8 protein_coding protein_coding MGP_BALBcJ_T0090926.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995149 122004951 + MGP_BALBcJ_P0090926 Def8 protein_coding protein_coding MGP_BALBcJ_T0090927.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995158 122015399 + MGP_BALBcJ_P0090927 Def8 protein_coding protein_coding MGP_BALBcJ_T0090928.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995161 122004887 + MGP_BALBcJ_P0090928 Def8 protein_coding protein_coding MGP_BALBcJ_T0090929.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995165 122007655 + MGP_BALBcJ_P0090929 Def8 protein_coding protein_coding MGP_BALBcJ_T0090930.1 MGP_BALBcJ_G0034229.1 mouse_genomes_project 8 121995461 122015391 + MGP_BALBcJ_P0090930 Def8 protein_coding protein_coding MGP_BALBcJ_T0015951.1 MGP_BALBcJ_G0014048.1 mouse_genomes_project 8 61345908 61351553 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090543.1 MGP_BALBcJ_G0034121.1 mouse_genomes_project 8 110189030 110201080 - MGP_BALBcJ_P0090543 Tmem170 protein_coding protein_coding MGP_BALBcJ_T0090375.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105292075 105322902 - MGP_BALBcJ_P0090375 Terf2 protein_coding protein_coding MGP_BALBcJ_T0090376.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105292077 105322547 - MGP_BALBcJ_P0090376 Terf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090377.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105292077 105322902 - MGP_BALBcJ_P0090377 Terf2 protein_coding protein_coding MGP_BALBcJ_T0090378.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105292603 105322871 - MGP_BALBcJ_P0090378 Terf2 protein_coding protein_coding MGP_BALBcJ_T0090379.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105298192 105322904 - MGP_BALBcJ_P0090379 Terf2 protein_coding protein_coding MGP_BALBcJ_T0090380.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105298994 105302549 - Terf2 protein_coding retained_intron MGP_BALBcJ_T0090381.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105302101 105304119 - Terf2 protein_coding retained_intron MGP_BALBcJ_T0090382.1 MGP_BALBcJ_G0034070.1 mouse_genomes_project 8 105302110 105305895 - Terf2 protein_coding retained_intron MGP_BALBcJ_T0090535.1 MGP_BALBcJ_G0034116.1 mouse_genomes_project 8 109934418 109939225 - Ldhd protein_coding retained_intron MGP_BALBcJ_T0090536.1 MGP_BALBcJ_G0034116.1 mouse_genomes_project 8 109936136 109940973 - Ldhd protein_coding retained_intron MGP_BALBcJ_T0090537.1 MGP_BALBcJ_G0034116.1 mouse_genomes_project 8 109936904 109941012 - MGP_BALBcJ_P0090537 Ldhd protein_coding protein_coding MGP_BALBcJ_T0089328.1 MGP_BALBcJ_G0033719.1 mouse_genomes_project 8 69008726 69011834 + MGP_BALBcJ_P0089328 Ocel1 protein_coding protein_coding MGP_BALBcJ_T0089329.1 MGP_BALBcJ_G0033719.1 mouse_genomes_project 8 69008767 69011135 + MGP_BALBcJ_P0089329 Ocel1 protein_coding protein_coding MGP_BALBcJ_T0089330.1 MGP_BALBcJ_G0033719.1 mouse_genomes_project 8 69008774 69016813 + MGP_BALBcJ_P0089330 Ocel1 protein_coding protein_coding MGP_BALBcJ_T0089331.1 MGP_BALBcJ_G0033719.1 mouse_genomes_project 8 69009918 69010401 + Ocel1 protein_coding retained_intron MGP_BALBcJ_T0009107.1 MGP_BALBcJ_G0007324.1 mouse_genomes_project 8 84590853 84621800 + lincRNA lincRNA MGP_BALBcJ_T0015980.1 MGP_BALBcJ_G0014077.1 mouse_genomes_project 8 96966194 96968898 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005380.1 MGP_BALBcJ_G0004561.1 mouse_genomes_project 8 120471686 120472658 - Gm27011 antisense antisense MGP_BALBcJ_T0088428.1 MGP_BALBcJ_G0033442.1 mouse_genomes_project 8 20737000 20775755 + MGP_BALBcJ_P0088428 Sfrp1 protein_coding protein_coding MGP_BALBcJ_T0010952.1 MGP_BALBcJ_G0009077.1 mouse_genomes_project 8 68565354 68565448 + Mir1969 miRNA miRNA MGP_BALBcJ_T0089800.1 MGP_BALBcJ_G0033861.1 mouse_genomes_project 8 82670026 82686268 + MGP_BALBcJ_P0089800 Hook2 protein_coding protein_coding MGP_BALBcJ_T0098408.1 MGP_BALBcJ_G0036462.1 mouse_genomes_project 8 122426339 122427347 + pseudogene pseudogene MGP_BALBcJ_T0089477.1 MGP_BALBcJ_G0033765.1 mouse_genomes_project 8 70377212 70394139 + MGP_BALBcJ_P0089477 Sin3b protein_coding protein_coding MGP_BALBcJ_T0089478.1 MGP_BALBcJ_G0033765.1 mouse_genomes_project 8 70377212 70412788 + MGP_BALBcJ_P0089478 Sin3b protein_coding protein_coding MGP_BALBcJ_T0088131.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8561046 8576698 + MGP_BALBcJ_P0088131 Carkd protein_coding protein_coding MGP_BALBcJ_T0088132.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8561107 8578371 + MGP_BALBcJ_P0088132 Carkd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088133.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8561108 8576698 + MGP_BALBcJ_P0088133 Carkd protein_coding protein_coding MGP_BALBcJ_T0088134.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8561133 8570607 + Carkd protein_coding retained_intron MGP_BALBcJ_T0088135.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8561173 8573647 + Carkd protein_coding retained_intron MGP_BALBcJ_T0088136.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8561193 8576456 + MGP_BALBcJ_P0088136 Carkd protein_coding protein_coding MGP_BALBcJ_T0088137.1 MGP_BALBcJ_G0033335.1 mouse_genomes_project 8 8573372 8576678 + Carkd protein_coding retained_intron MGP_BALBcJ_T0089685.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82046886 82179501 + Cacna1a protein_coding retained_intron MGP_BALBcJ_T0089686.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82075347 82303609 + MGP_BALBcJ_P0089686 Cacna1a protein_coding protein_coding MGP_BALBcJ_T0089687.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82075361 82303425 + MGP_BALBcJ_P0089687 Cacna1a protein_coding protein_coding MGP_BALBcJ_T0089688.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82207827 82214751 + Cacna1a protein_coding processed_transcript MGP_BALBcJ_T0089689.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82232802 82241399 + Cacna1a protein_coding retained_intron MGP_BALBcJ_T0089690.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82262261 82273462 + Cacna1a protein_coding retained_intron MGP_BALBcJ_T0089691.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82262274 82274424 + Cacna1a protein_coding retained_intron MGP_BALBcJ_T0089692.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82262300 82297006 + Cacna1a protein_coding retained_intron MGP_BALBcJ_T0089693.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82262803 82279221 + Cacna1a protein_coding processed_transcript MGP_BALBcJ_T0089694.1 MGP_BALBcJ_G0033839.1 mouse_genomes_project 8 82276916 82303612 + MGP_BALBcJ_P0089694 Cacna1a protein_coding unknown_likely_coding MGP_BALBcJ_T0089582.1 MGP_BALBcJ_G0033801.1 mouse_genomes_project 8 80485794 80719321 + MGP_BALBcJ_P0089582 Rnf150 protein_coding protein_coding MGP_BALBcJ_T0088890.1 MGP_BALBcJ_G0033589.1 mouse_genomes_project 8 51696648 51805890 + MGP_BALBcJ_P0088890 Vegfc protein_coding protein_coding MGP_BALBcJ_T0101397.1 MGP_BALBcJ_G0039433.1 mouse_genomes_project 8 58367362 58367470 - Gm23329 snoRNA snoRNA MGP_BALBcJ_T0101424.1 MGP_BALBcJ_G0039460.1 mouse_genomes_project 8 109125188 109125264 - Gm22193 snoRNA snoRNA MGP_BALBcJ_T0088737.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42435434 42552407 + MGP_BALBcJ_P0088737 Fat1 protein_coding protein_coding MGP_BALBcJ_T0088738.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42435549 42551559 + MGP_BALBcJ_P0088738 Fat1 protein_coding unknown_likely_coding MGP_BALBcJ_T0088739.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42450192 42552407 + MGP_BALBcJ_P0088739 Fat1 protein_coding protein_coding MGP_BALBcJ_T0088740.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42533507 42552395 + MGP_BALBcJ_P0088740 Fat1 protein_coding protein_coding MGP_BALBcJ_T0088741.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42544682 42550981 + MGP_BALBcJ_P0088741 Fat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088742.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42544682 42550981 + MGP_BALBcJ_P0088742 Fat1 protein_coding protein_coding MGP_BALBcJ_T0088743.1 MGP_BALBcJ_G0033549.1 mouse_genomes_project 8 42545284 42550650 + Fat1 protein_coding retained_intron MGP_BALBcJ_T0091067.1 MGP_BALBcJ_G0034274.1 mouse_genomes_project 8 127371923 127418163 - MGP_BALBcJ_P0091067 Gm3952 protein_coding protein_coding MGP_BALBcJ_T0009076.1 MGP_BALBcJ_G0007296.1 mouse_genomes_project 8 32964428 32970672 - Gm16793 lincRNA lincRNA MGP_BALBcJ_T0089143.1 MGP_BALBcJ_G0033668.1 mouse_genomes_project 8 67709726 67737178 - MGP_BALBcJ_P0089143 Ncan protein_coding protein_coding MGP_BALBcJ_T0015940.1 MGP_BALBcJ_G0014037.1 mouse_genomes_project 8 33757966 33759011 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089102.1 MGP_BALBcJ_G0033655.1 mouse_genomes_project 8 67391044 67407572 + MGP_BALBcJ_P0089102 Atp13a1 protein_coding protein_coding MGP_BALBcJ_T0089373.1 MGP_BALBcJ_G0033733.1 mouse_genomes_project 8 69207513 69213358 - MGP_BALBcJ_P0089373 Nxnl1 protein_coding protein_coding MGP_BALBcJ_T0089374.1 MGP_BALBcJ_G0033733.1 mouse_genomes_project 8 69207513 69213406 - MGP_BALBcJ_P0089374 Nxnl1 protein_coding protein_coding MGP_BALBcJ_T0101398.1 MGP_BALBcJ_G0039434.1 mouse_genomes_project 8 60356226 60356340 + Gm22324 snoRNA snoRNA MGP_BALBcJ_T0089485.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72571266 72610963 + MGP_BALBcJ_P0089485 Hmgxb4 protein_coding protein_coding MGP_BALBcJ_T0089486.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72571314 72577434 + Hmgxb4 protein_coding processed_transcript MGP_BALBcJ_T0089487.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72571314 72613742 + MGP_BALBcJ_P0089487 Hmgxb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089488.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72571326 72576856 + Hmgxb4 protein_coding processed_transcript MGP_BALBcJ_T0089489.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72571347 72578382 + Hmgxb4 protein_coding retained_intron MGP_BALBcJ_T0089490.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72597155 72613677 + MGP_BALBcJ_P0089490 Hmgxb4 protein_coding protein_coding MGP_BALBcJ_T0089491.1 MGP_BALBcJ_G0033769.1 mouse_genomes_project 8 72603788 72605010 + Hmgxb4 protein_coding retained_intron MGP_BALBcJ_T0009103.1 MGP_BALBcJ_G0007320.1 mouse_genomes_project 8 81842975 81847853 - Gm26887 lincRNA lincRNA MGP_BALBcJ_T0090645.1 MGP_BALBcJ_G0034161.1 mouse_genomes_project 8 118076293 118083834 - MGP_BALBcJ_P0090645 Taf1c protein_coding protein_coding MGP_BALBcJ_T0090646.1 MGP_BALBcJ_G0034161.1 mouse_genomes_project 8 118076293 118083834 - MGP_BALBcJ_P0090646 Taf1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090647.1 MGP_BALBcJ_G0034161.1 mouse_genomes_project 8 118077137 118078164 - Taf1c protein_coding processed_transcript MGP_BALBcJ_T0090648.1 MGP_BALBcJ_G0034161.1 mouse_genomes_project 8 118077705 118079032 - Taf1c protein_coding retained_intron MGP_BALBcJ_T0090649.1 MGP_BALBcJ_G0034161.1 mouse_genomes_project 8 118077946 118079897 - Taf1c protein_coding processed_transcript MGP_BALBcJ_T0090849.1 MGP_BALBcJ_G0034213.1 mouse_genomes_project 8 121416084 121509348 - MGP_BALBcJ_P0090849 protein_coding protein_coding MGP_BALBcJ_T0090850.1 MGP_BALBcJ_G0034213.1 mouse_genomes_project 8 121416569 121509348 - MGP_BALBcJ_P0090850 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090851.1 MGP_BALBcJ_G0034213.1 mouse_genomes_project 8 121416898 121450579 - MGP_BALBcJ_P0090851 protein_coding protein_coding MGP_BALBcJ_T0090852.1 MGP_BALBcJ_G0034213.1 mouse_genomes_project 8 121430310 121450900 - MGP_BALBcJ_P0090852 protein_coding unknown_likely_coding MGP_BALBcJ_T0090853.1 MGP_BALBcJ_G0034213.1 mouse_genomes_project 8 121439395 121509328 - protein_coding retained_intron MGP_BALBcJ_T0100137.1 MGP_BALBcJ_G0038173.1 mouse_genomes_project 8 76592056 76592163 - Gm22044 snRNA snRNA MGP_BALBcJ_T0100130.1 MGP_BALBcJ_G0038166.1 mouse_genomes_project 8 63534023 63534130 - Gm24205 snRNA snRNA MGP_BALBcJ_T0098664.1 MGP_BALBcJ_G0036718.1 mouse_genomes_project 8 74158831 74158959 - Gm27355 rRNA rRNA MGP_BALBcJ_T0088472.1 MGP_BALBcJ_G0033455.1 mouse_genomes_project 8 22375375 22438561 - MGP_BALBcJ_P0088472 Plekha2 protein_coding protein_coding MGP_BALBcJ_T0088473.1 MGP_BALBcJ_G0033455.1 mouse_genomes_project 8 22377070 22438352 - MGP_BALBcJ_P0088473 Plekha2 protein_coding protein_coding MGP_BALBcJ_T0088474.1 MGP_BALBcJ_G0033455.1 mouse_genomes_project 8 22379211 22438139 - MGP_BALBcJ_P0088474 Plekha2 protein_coding protein_coding MGP_BALBcJ_T0088475.1 MGP_BALBcJ_G0033455.1 mouse_genomes_project 8 22399143 22427716 - MGP_BALBcJ_P0088475 Plekha2 protein_coding protein_coding MGP_BALBcJ_T0088351.1 MGP_BALBcJ_G0033411.1 mouse_genomes_project 8 19190504 19194517 - MGP_BALBcJ_P0088351 Defb9 protein_coding protein_coding MGP_BALBcJ_T0015914.1 MGP_BALBcJ_G0014011.1 mouse_genomes_project 8 1842875 1843358 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088531.1 MGP_BALBcJ_G0033469.1 mouse_genomes_project 8 23334697 23348807 - MGP_BALBcJ_P0088531 Pomk protein_coding protein_coding MGP_BALBcJ_T0009154.1 MGP_BALBcJ_G0007353.1 mouse_genomes_project 8 104785381 104797012 + 1110028F18Rik lincRNA lincRNA MGP_BALBcJ_T0011688.1 MGP_BALBcJ_G0009813.1 mouse_genomes_project 8 671309 671622 - Gm23886 misc_RNA misc_RNA MGP_BALBcJ_T0088600.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31082654 31127931 + MGP_BALBcJ_P0088600 Gtf2e2 protein_coding protein_coding MGP_BALBcJ_T0088601.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31082863 31127931 + MGP_BALBcJ_P0088601 Gtf2e2 protein_coding protein_coding MGP_BALBcJ_T0088602.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31082954 31103587 + MGP_BALBcJ_P0088602 Gtf2e2 protein_coding protein_coding MGP_BALBcJ_T0088603.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31083132 31086845 + MGP_BALBcJ_P0088603 Gtf2e2 protein_coding protein_coding MGP_BALBcJ_T0088604.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31083160 31127940 + MGP_BALBcJ_P0088604 Gtf2e2 protein_coding protein_coding MGP_BALBcJ_T0088605.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31084265 31109586 + MGP_BALBcJ_P0088605 Gtf2e2 protein_coding protein_coding MGP_BALBcJ_T0088607.1 MGP_BALBcJ_G0033503.1 mouse_genomes_project 8 31115960 31127545 + Gtf2e2 protein_coding processed_transcript MGP_BALBcJ_T0009049.1 MGP_BALBcJ_G0007276.1 mouse_genomes_project 8 8780257 8789612 + 1700128E19Rik lincRNA lincRNA MGP_BALBcJ_T0018451.1 MGP_BALBcJ_G0015662.1 mouse_genomes_project 8 97219221 97324900 - Gm15680 processed_transcript processed_transcript MGP_BALBcJ_T0089405.1 MGP_BALBcJ_G0033741.1 mouse_genomes_project 8 69354113 69364295 - MGP_BALBcJ_P0089405 B3gnt3 protein_coding protein_coding MGP_BALBcJ_T0090249.1 MGP_BALBcJ_G0034016.1 mouse_genomes_project 8 103502168 103524745 + MGP_BALBcJ_P0090249 Slc9a5 protein_coding protein_coding MGP_BALBcJ_T0009116.1 MGP_BALBcJ_G0007332.1 mouse_genomes_project 8 85167964 85171287 + Gm19872 lincRNA lincRNA MGP_BALBcJ_T0009127.1 MGP_BALBcJ_G0007337.1 mouse_genomes_project 8 85891122 85891591 + 9430002A10Rik lincRNA lincRNA MGP_BALBcJ_T0009128.1 MGP_BALBcJ_G0007337.1 mouse_genomes_project 8 85891122 85891597 + 9430002A10Rik lincRNA lincRNA MGP_BALBcJ_T0087969.1 MGP_BALBcJ_G0033282.1 mouse_genomes_project 8 88992 218917 - MGP_BALBcJ_P0087969 Insr protein_coding protein_coding MGP_BALBcJ_T0087970.1 MGP_BALBcJ_G0033282.1 mouse_genomes_project 8 148971 218851 - Insr protein_coding retained_intron MGP_BALBcJ_T0090598.1 MGP_BALBcJ_G0034142.1 mouse_genomes_project 8 115405900 115415243 - MGP_BALBcJ_P0090598 1700030J22Rik protein_coding protein_coding MGP_BALBcJ_T0090384.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533394 105569901 + Nfat5 protein_coding retained_intron MGP_BALBcJ_T0090385.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533394 105613298 + MGP_BALBcJ_P0090385 Nfat5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090386.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533394 105620925 + MGP_BALBcJ_P0090386 Nfat5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090387.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533433 105568386 + Nfat5 protein_coding retained_intron MGP_BALBcJ_T0090388.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533483 105620916 + MGP_BALBcJ_P0090388 Nfat5 protein_coding protein_coding MGP_BALBcJ_T0090389.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533483 105613249 + MGP_BALBcJ_P0090389 Nfat5 protein_coding protein_coding MGP_BALBcJ_T0090390.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105533750 105614183 + MGP_BALBcJ_P0090390 Nfat5 protein_coding protein_coding MGP_BALBcJ_T0090391.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105579665 105608476 + Nfat5 protein_coding retained_intron MGP_BALBcJ_T0090392.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105579665 105596763 + Nfat5 protein_coding retained_intron MGP_BALBcJ_T0090393.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105580070 105611730 + MGP_BALBcJ_P0090393 Nfat5 protein_coding protein_coding MGP_BALBcJ_T0090394.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105585859 105602840 + MGP_BALBcJ_P0090394 Nfat5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090395.1 MGP_BALBcJ_G0034072.1 mouse_genomes_project 8 105596842 105614966 + MGP_BALBcJ_P0090395 Nfat5 protein_coding protein_coding MGP_BALBcJ_T0089807.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82744052 82751005 + MGP_BALBcJ_P0089807 Fbxw9 protein_coding protein_coding MGP_BALBcJ_T0089808.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82744053 82751007 + Fbxw9 protein_coding retained_intron MGP_BALBcJ_T0089809.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82744094 82748690 + Fbxw9 protein_coding retained_intron MGP_BALBcJ_T0089810.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82744526 82751000 + Fbxw9 protein_coding retained_intron MGP_BALBcJ_T0089811.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82744564 82750770 + Fbxw9 protein_coding processed_transcript MGP_BALBcJ_T0089812.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82748472 82750214 + Fbxw9 protein_coding retained_intron MGP_BALBcJ_T0089813.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82749456 82750251 + Fbxw9 protein_coding processed_transcript MGP_BALBcJ_T0089814.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82749510 82750253 + Fbxw9 protein_coding retained_intron MGP_BALBcJ_T0089815.1 MGP_BALBcJ_G0033866.1 mouse_genomes_project 8 82749951 82750787 + Fbxw9 protein_coding retained_intron MGP_BALBcJ_T0090024.1 MGP_BALBcJ_G0033931.1 mouse_genomes_project 8 91945112 91946062 + MGP_BALBcJ_P0090024 Mt2 protein_coding protein_coding MGP_BALBcJ_T0088031.1 MGP_BALBcJ_G0033297.1 mouse_genomes_project 8 607799 610438 + MGP_BALBcJ_P0088031 Mcemp1 protein_coding protein_coding MGP_BALBcJ_T0090702.1 MGP_BALBcJ_G0034177.1 mouse_genomes_project 8 119106966 119167260 - MGP_BALBcJ_P0090702 Gm27021 protein_coding protein_coding MGP_BALBcJ_T0091029.1 MGP_BALBcJ_G0034267.1 mouse_genomes_project 8 125001264 125058229 - MGP_BALBcJ_P0091029 Tarbp1 protein_coding protein_coding MGP_BALBcJ_T0091030.1 MGP_BALBcJ_G0034267.1 mouse_genomes_project 8 125001584 125058229 - MGP_BALBcJ_P0091030 Tarbp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0015983.1 MGP_BALBcJ_G0014080.1 mouse_genomes_project 8 103836879 103837335 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089970.1 MGP_BALBcJ_G0033913.1 mouse_genomes_project 8 90661364 90662365 + MGP_BALBcJ_P0089970 Capns2 protein_coding protein_coding MGP_BALBcJ_T0101403.1 MGP_BALBcJ_G0039439.1 mouse_genomes_project 8 64799840 64799990 - Gm24677 snoRNA snoRNA MGP_BALBcJ_T0009056.1 MGP_BALBcJ_G0007280.1 mouse_genomes_project 8 17010896 17223708 - lincRNA lincRNA MGP_BALBcJ_T0088303.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 12932464 14561176 - MGP_BALBcJ_P0088303 Csmd1 protein_coding protein_coding MGP_BALBcJ_T0088304.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 12932472 13024657 - Csmd1 protein_coding retained_intron MGP_BALBcJ_T0088305.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 13115086 14561176 - Csmd1 protein_coding processed_transcript MGP_BALBcJ_T0088306.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 13316663 14561176 - Csmd1 protein_coding retained_intron MGP_BALBcJ_T0088307.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 13376539 14561481 - Csmd1 protein_coding processed_transcript MGP_BALBcJ_T0088308.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 14245225 14561280 - Csmd1 protein_coding retained_intron MGP_BALBcJ_T0088309.1 MGP_BALBcJ_G0033383.1 mouse_genomes_project 8 14399318 14561272 - Csmd1 protein_coding processed_transcript MGP_BALBcJ_T0009115.1 MGP_BALBcJ_G0007331.1 mouse_genomes_project 8 85165937 85166929 + 4930535O05Rik lincRNA lincRNA MGP_BALBcJ_T0089913.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86053210 86055105 - Brd7 protein_coding processed_transcript MGP_BALBcJ_T0089914.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86053221 86084871 - MGP_BALBcJ_P0089914 Brd7 protein_coding protein_coding MGP_BALBcJ_T0089915.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86054972 86056106 - Brd7 protein_coding processed_transcript MGP_BALBcJ_T0089916.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86054991 86057670 - Brd7 protein_coding retained_intron MGP_BALBcJ_T0089917.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86055071 86065007 - Brd7 protein_coding processed_transcript MGP_BALBcJ_T0089918.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86055733 86064929 - Brd7 protein_coding processed_transcript MGP_BALBcJ_T0089919.1 MGP_BALBcJ_G0033895.1 mouse_genomes_project 8 86080221 86084694 - Brd7 protein_coding processed_transcript MGP_BALBcJ_T0015960.1 MGP_BALBcJ_G0014057.1 mouse_genomes_project 8 74424839 74425632 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088972.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59069361 59462057 - MGP_BALBcJ_P0088972 Palld protein_coding protein_coding MGP_BALBcJ_T0088973.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59069367 59320369 - MGP_BALBcJ_P0088973 Palld protein_coding protein_coding MGP_BALBcJ_T0088974.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59069467 59156507 - MGP_BALBcJ_P0088974 Palld protein_coding protein_coding MGP_BALBcJ_T0088975.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59071040 59072016 - Palld protein_coding retained_intron MGP_BALBcJ_T0088976.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59071136 59462078 - MGP_BALBcJ_P0088976 Palld protein_coding protein_coding MGP_BALBcJ_T0088977.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59072028 59149893 - MGP_BALBcJ_P0088977 Palld protein_coding protein_coding MGP_BALBcJ_T0088978.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59081223 59090769 - Palld protein_coding retained_intron MGP_BALBcJ_T0088979.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59244088 59320378 - Palld protein_coding retained_intron MGP_BALBcJ_T0088980.1 MGP_BALBcJ_G0033614.1 mouse_genomes_project 8 59268186 59320369 - Palld protein_coding retained_intron MGP_BALBcJ_T0009111.1 MGP_BALBcJ_G0007328.1 mouse_genomes_project 8 84873780 84904944 - Gm10637 lincRNA lincRNA MGP_BALBcJ_T0009112.1 MGP_BALBcJ_G0007328.1 mouse_genomes_project 8 84900184 84904955 - Gm10637 lincRNA lincRNA MGP_BALBcJ_T0089636.1 MGP_BALBcJ_G0033818.1 mouse_genomes_project 8 81579288 81600763 - MGP_BALBcJ_P0089636 Gm10644 protein_coding protein_coding MGP_BALBcJ_T0089370.1 MGP_BALBcJ_G0033730.1 mouse_genomes_project 8 69180812 69183972 - MGP_BALBcJ_P0089370 Bst2 protein_coding protein_coding MGP_BALBcJ_T0089842.1 MGP_BALBcJ_G0033876.1 mouse_genomes_project 8 82990152 83029751 - MGP_BALBcJ_P0089842 Mylk3 protein_coding protein_coding MGP_BALBcJ_T0089843.1 MGP_BALBcJ_G0033876.1 mouse_genomes_project 8 82990296 83047158 - MGP_BALBcJ_P0089843 Mylk3 protein_coding protein_coding MGP_BALBcJ_T0089844.1 MGP_BALBcJ_G0033876.1 mouse_genomes_project 8 82992906 83029774 - MGP_BALBcJ_P0089844 Mylk3 protein_coding protein_coding MGP_BALBcJ_T0089845.1 MGP_BALBcJ_G0033876.1 mouse_genomes_project 8 83022761 83052343 - MGP_BALBcJ_P0089845 Mylk3 protein_coding protein_coding MGP_BALBcJ_T0089846.1 MGP_BALBcJ_G0033876.1 mouse_genomes_project 8 83023936 83047214 - Mylk3 protein_coding retained_intron MGP_BALBcJ_T0011002.1 MGP_BALBcJ_G0009127.1 mouse_genomes_project 8 119036374 119036433 + Mir7687 miRNA miRNA MGP_BALBcJ_T0088636.1 MGP_BALBcJ_G0033511.1 mouse_genomes_project 8 32145554 32158116 + MGP_BALBcJ_P0088636 Dusp4 protein_coding protein_coding MGP_BALBcJ_T0088380.1 MGP_BALBcJ_G0033427.1 mouse_genomes_project 8 19714989 19745759 + MGP_BALBcJ_P0088380 Mrps31 protein_coding unknown_likely_coding MGP_BALBcJ_T0088861.1 MGP_BALBcJ_G0033580.1 mouse_genomes_project 8 45244334 45246090 + MGP_BALBcJ_P0088861 protein_coding protein_coding MGP_BALBcJ_T0090554.1 MGP_BALBcJ_G0034127.1 mouse_genomes_project 8 110340874 110350742 + MGP_BALBcJ_P0090554 Terf2ip protein_coding protein_coding MGP_BALBcJ_T0005372.1 MGP_BALBcJ_G0004554.1 mouse_genomes_project 8 113084662 113094223 - Gm16118 antisense antisense MGP_BALBcJ_T0089697.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82350677 82355691 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089698.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82350689 82351463 + Trmt1 protein_coding processed_transcript MGP_BALBcJ_T0089699.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82350709 82356077 + MGP_BALBcJ_P0089699 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089700.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82353615 82364921 + MGP_BALBcJ_P0089700 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089701.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82353996 82364900 + MGP_BALBcJ_P0089701 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089702.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354006 82355494 + Trmt1 protein_coding processed_transcript MGP_BALBcJ_T0089703.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354006 82356125 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089704.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354006 82360640 + MGP_BALBcJ_P0089704 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089705.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354013 82364899 + MGP_BALBcJ_P0089705 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089706.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354018 82362030 + MGP_BALBcJ_P0089706 Trmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089707.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354021 82360411 + MGP_BALBcJ_P0089707 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089708.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354032 82364921 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089709.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354032 82355983 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089710.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354033 82355566 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089711.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354034 82354728 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089712.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354035 82355563 + Trmt1 protein_coding processed_transcript MGP_BALBcJ_T0089713.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354035 82360559 + MGP_BALBcJ_P0089713 Trmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089714.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354035 82360583 + MGP_BALBcJ_P0089714 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089715.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354038 82356726 + Trmt1 protein_coding processed_transcript MGP_BALBcJ_T0089716.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354217 82364898 + MGP_BALBcJ_P0089716 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089717.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354230 82360349 + MGP_BALBcJ_P0089717 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089718.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82354385 82360640 + Trmt1 protein_coding processed_transcript MGP_BALBcJ_T0089719.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82355143 82362237 + Trmt1 protein_coding processed_transcript MGP_BALBcJ_T0089720.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82360031 82362541 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089721.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82361948 82362626 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089722.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82362079 82363365 + MGP_BALBcJ_P0089722 Trmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089723.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82362426 82363059 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089724.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82363501 82364899 + MGP_BALBcJ_P0089724 Trmt1 protein_coding protein_coding MGP_BALBcJ_T0089725.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82364183 82364899 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0089726.1 MGP_BALBcJ_G0033842.1 mouse_genomes_project 8 82364293 82364764 + Trmt1 protein_coding retained_intron MGP_BALBcJ_T0009075.1 MGP_BALBcJ_G0007295.1 mouse_genomes_project 8 31703136 31724763 + lincRNA lincRNA MGP_BALBcJ_T0005361.1 MGP_BALBcJ_G0004544.1 mouse_genomes_project 8 104114902 104126966 + Gm16156 antisense antisense MGP_BALBcJ_T0089588.1 MGP_BALBcJ_G0033805.1 mouse_genomes_project 8 80936372 80956614 - MGP_BALBcJ_P0089588 Elmod2 protein_coding protein_coding MGP_BALBcJ_T0089589.1 MGP_BALBcJ_G0033805.1 mouse_genomes_project 8 80936762 80956614 - MGP_BALBcJ_P0089589 Elmod2 protein_coding protein_coding MGP_BALBcJ_T0089590.1 MGP_BALBcJ_G0033805.1 mouse_genomes_project 8 80938918 80948749 - Elmod2 protein_coding retained_intron MGP_BALBcJ_T0089591.1 MGP_BALBcJ_G0033805.1 mouse_genomes_project 8 80941194 80955576 - Elmod2 protein_coding retained_intron MGP_BALBcJ_T0089592.1 MGP_BALBcJ_G0033805.1 mouse_genomes_project 8 80948340 80956532 - Elmod2 protein_coding retained_intron MGP_BALBcJ_T0089593.1 MGP_BALBcJ_G0033805.1 mouse_genomes_project 8 80952817 80956532 - Elmod2 protein_coding retained_intron MGP_BALBcJ_T0015964.1 MGP_BALBcJ_G0014061.1 mouse_genomes_project 8 77715108 77716641 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0088949.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58465057 58509083 - MGP_BALBcJ_P0088949 Clcn3 protein_coding protein_coding MGP_BALBcJ_T0088950.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58465534 58477637 - Clcn3 protein_coding processed_transcript MGP_BALBcJ_T0088951.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58466570 58509210 - MGP_BALBcJ_P0088951 Clcn3 protein_coding protein_coding MGP_BALBcJ_T0088952.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58466597 58509695 - Clcn3 protein_coding retained_intron MGP_BALBcJ_T0088953.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58466597 58537661 - MGP_BALBcJ_P0088953 Clcn3 protein_coding protein_coding MGP_BALBcJ_T0088954.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58466597 58537661 - MGP_BALBcJ_P0088954 Clcn3 protein_coding protein_coding MGP_BALBcJ_T0088955.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58482961 58509241 - Clcn3 protein_coding retained_intron MGP_BALBcJ_T0088956.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58489956 58537666 - Clcn3 protein_coding retained_intron MGP_BALBcJ_T0088957.1 MGP_BALBcJ_G0033610.1 mouse_genomes_project 8 58493080 58537708 - Clcn3 protein_coding retained_intron MGP_BALBcJ_T0090948.1 MGP_BALBcJ_G0034237.1 mouse_genomes_project 8 122459614 122462570 - MGP_BALBcJ_P0090948 Acta1 protein_coding protein_coding MGP_BALBcJ_T0089887.1 MGP_BALBcJ_G0033890.1 mouse_genomes_project 8 85375162 85638019 - MGP_BALBcJ_P0089887 Zfp423 protein_coding protein_coding MGP_BALBcJ_T0089888.1 MGP_BALBcJ_G0033890.1 mouse_genomes_project 8 85375165 85612125 - MGP_BALBcJ_P0089888 Zfp423 protein_coding protein_coding MGP_BALBcJ_T0089889.1 MGP_BALBcJ_G0033890.1 mouse_genomes_project 8 85496653 85670284 - MGP_BALBcJ_P0089889 Zfp423 protein_coding protein_coding MGP_BALBcJ_T0089890.1 MGP_BALBcJ_G0033890.1 mouse_genomes_project 8 85496808 85517939 - MGP_BALBcJ_P0089890 Zfp423 protein_coding protein_coding MGP_BALBcJ_T0089891.1 MGP_BALBcJ_G0033890.1 mouse_genomes_project 8 85496977 85660474 - Zfp423 protein_coding processed_transcript MGP_BALBcJ_T0089892.1 MGP_BALBcJ_G0033890.1 mouse_genomes_project 8 85496994 85665151 - Zfp423 protein_coding processed_transcript MGP_BALBcJ_T0088337.1 MGP_BALBcJ_G0033399.1 mouse_genomes_project 8 16271372 16273570 + MGP_BALBcJ_P0088337 Defb46 protein_coding protein_coding MGP_BALBcJ_T0015957.1 MGP_BALBcJ_G0014054.1 mouse_genomes_project 8 71374425 71375407 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015956.1 MGP_BALBcJ_G0014053.1 mouse_genomes_project 8 70104068 70104471 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101380.1 MGP_BALBcJ_G0039416.1 mouse_genomes_project 8 20612356 20612488 - Gm24335 snoRNA snoRNA MGP_BALBcJ_T0010926.1 MGP_BALBcJ_G0009051.1 mouse_genomes_project 8 8701912 8701955 - Mir7238 miRNA miRNA MGP_BALBcJ_T0089089.1 MGP_BALBcJ_G0033649.1 mouse_genomes_project 8 67214600 67229060 - MGP_BALBcJ_P0089089 Zfp868 protein_coding protein_coding MGP_BALBcJ_T0089090.1 MGP_BALBcJ_G0033649.1 mouse_genomes_project 8 67215157 67223116 - MGP_BALBcJ_P0089090 Zfp868 protein_coding protein_coding MGP_BALBcJ_T0089091.1 MGP_BALBcJ_G0033649.1 mouse_genomes_project 8 67216163 67217803 - Zfp868 protein_coding retained_intron MGP_BALBcJ_T0089092.1 MGP_BALBcJ_G0033649.1 mouse_genomes_project 8 67222629 67229057 - Zfp868 protein_coding retained_intron MGP_BALBcJ_T0015929.1 MGP_BALBcJ_G0014026.1 mouse_genomes_project 8 18166788 18167524 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090960.1 MGP_BALBcJ_G0034243.1 mouse_genomes_project 8 122934861 122953183 - MGP_BALBcJ_P0090960 Pgbd5 protein_coding unknown_likely_coding MGP_BALBcJ_T0090961.1 MGP_BALBcJ_G0034243.1 mouse_genomes_project 8 122935324 123008601 - MGP_BALBcJ_P0090961 Pgbd5 protein_coding protein_coding MGP_BALBcJ_T0090962.1 MGP_BALBcJ_G0034243.1 mouse_genomes_project 8 122935328 123003300 - MGP_BALBcJ_P0090962 Pgbd5 protein_coding protein_coding MGP_BALBcJ_T0090963.1 MGP_BALBcJ_G0034243.1 mouse_genomes_project 8 122938815 122942455 - Pgbd5 protein_coding processed_transcript MGP_BALBcJ_T0090964.1 MGP_BALBcJ_G0034243.1 mouse_genomes_project 8 122938831 122942016 - Pgbd5 protein_coding retained_intron MGP_BALBcJ_T0005383.1 MGP_BALBcJ_G0004564.1 mouse_genomes_project 8 122868413 122869789 - 1810008B01Rik antisense antisense MGP_BALBcJ_T0098663.1 MGP_BALBcJ_G0036717.1 mouse_genomes_project 8 69790929 69791016 + Gm24747 rRNA rRNA MGP_BALBcJ_T0088981.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59486981 59524659 + MGP_BALBcJ_P0088981 Ddx60 protein_coding protein_coding MGP_BALBcJ_T0088982.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59486983 59602130 + MGP_BALBcJ_P0088982 Ddx60 protein_coding protein_coding MGP_BALBcJ_T0088983.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59486983 59602136 + MGP_BALBcJ_P0088983 Ddx60 protein_coding protein_coding MGP_BALBcJ_T0088984.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59486983 59501091 + MGP_BALBcJ_P0088984 Ddx60 protein_coding protein_coding MGP_BALBcJ_T0088985.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59545334 59549504 + Ddx60 protein_coding retained_intron MGP_BALBcJ_T0088986.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59582280 59585205 + Ddx60 protein_coding retained_intron MGP_BALBcJ_T0088987.1 MGP_BALBcJ_G0033615.1 mouse_genomes_project 8 59586415 59597552 + Ddx60 protein_coding retained_intron MGP_BALBcJ_T0010942.1 MGP_BALBcJ_G0009067.1 mouse_genomes_project 8 35720187 35720257 - Mir383 miRNA miRNA MGP_BALBcJ_T0088586.1 MGP_BALBcJ_G0033496.1 mouse_genomes_project 8 30582835 30741728 - MGP_BALBcJ_P0088586 Wrn protein_coding protein_coding MGP_BALBcJ_T0088587.1 MGP_BALBcJ_G0033496.1 mouse_genomes_project 8 30582835 30741728 - MGP_BALBcJ_P0088587 Wrn protein_coding protein_coding MGP_BALBcJ_T0088033.1 MGP_BALBcJ_G0033299.1 mouse_genomes_project 8 623814 636444 - MGP_BALBcJ_P0088033 Fcer2a protein_coding protein_coding MGP_BALBcJ_T0090884.1 MGP_BALBcJ_G0034220.1 mouse_genomes_project 8 121768074 121777677 + MGP_BALBcJ_P0090884 Spata33 protein_coding protein_coding MGP_BALBcJ_T0088494.1 MGP_BALBcJ_G0033458.1 mouse_genomes_project 8 22925793 22945072 - MGP_BALBcJ_P0088494 Letm2 protein_coding protein_coding MGP_BALBcJ_T0009065.1 MGP_BALBcJ_G0007288.1 mouse_genomes_project 8 27931682 27942342 + 4933433F19Rik lincRNA lincRNA MGP_BALBcJ_T0089282.1 MGP_BALBcJ_G0033702.1 mouse_genomes_project 8 68396347 68399172 + MGP_BALBcJ_P0089282 Rab3a protein_coding protein_coding MGP_BALBcJ_T0089283.1 MGP_BALBcJ_G0033702.1 mouse_genomes_project 8 68396948 68398191 + Rab3a protein_coding retained_intron MGP_BALBcJ_T0089369.1 MGP_BALBcJ_G0033729.1 mouse_genomes_project 8 69139676 69154732 - MGP_BALBcJ_P0089369 Plvap protein_coding protein_coding MGP_BALBcJ_T0015967.1 MGP_BALBcJ_G0014064.1 mouse_genomes_project 8 78925785 78926758 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015915.1 MGP_BALBcJ_G0014012.1 mouse_genomes_project 8 4035506 4036345 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0090597.1 MGP_BALBcJ_G0034141.1 mouse_genomes_project 8 115379342 115396706 + MGP_BALBcJ_P0090597 Atmin protein_coding protein_coding MGP_BALBcJ_T0009172.1 MGP_BALBcJ_G0007367.1 mouse_genomes_project 8 119937085 119942962 + Gm26747 lincRNA lincRNA MGP_BALBcJ_T0100124.1 MGP_BALBcJ_G0038160.1 mouse_genomes_project 8 49650896 49651035 + Gm24929 snRNA snRNA MGP_BALBcJ_T0088804.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43555852 43672554 - MGP_BALBcJ_P0088804 Snx25 protein_coding protein_coding MGP_BALBcJ_T0088805.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43555867 43639575 - Snx25 protein_coding retained_intron MGP_BALBcJ_T0088806.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43556048 43601413 - MGP_BALBcJ_P0088806 Snx25 protein_coding protein_coding MGP_BALBcJ_T0088807.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43571997 43579046 - Snx25 protein_coding processed_transcript MGP_BALBcJ_T0088808.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43578669 43646994 - MGP_BALBcJ_P0088808 Snx25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088809.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43578713 43612605 - Snx25 protein_coding processed_transcript MGP_BALBcJ_T0088810.1 MGP_BALBcJ_G0033563.1 mouse_genomes_project 8 43600970 43628062 - Snx25 protein_coding retained_intron MGP_BALBcJ_T0089267.1 MGP_BALBcJ_G0033695.1 mouse_genomes_project 8 68266293 68268997 - MGP_BALBcJ_P0089267 Gdf15 protein_coding protein_coding MGP_BALBcJ_T0089268.1 MGP_BALBcJ_G0033695.1 mouse_genomes_project 8 68266294 68269358 - MGP_BALBcJ_P0089268 Gdf15 protein_coding protein_coding MGP_BALBcJ_T0100112.1 MGP_BALBcJ_G0038148.1 mouse_genomes_project 8 10369150 10369253 - Gm25014 snRNA snRNA MGP_BALBcJ_T0088567.1 MGP_BALBcJ_G0033485.1 mouse_genomes_project 8 24835958 24888284 + MGP_BALBcJ_P0088567 protein_coding protein_coding MGP_BALBcJ_T0089658.1 MGP_BALBcJ_G0033826.1 mouse_genomes_project 8 81691534 81693615 - MGP_BALBcJ_P0089658 Rln3 protein_coding protein_coding MGP_BALBcJ_T0100119.1 MGP_BALBcJ_G0038155.1 mouse_genomes_project 8 34752000 34752102 - Gm25126 snRNA snRNA MGP_BALBcJ_T0089200.1 MGP_BALBcJ_G0033678.1 mouse_genomes_project 8 67907959 67917543 - MGP_BALBcJ_P0089200 Ddx49 protein_coding protein_coding MGP_BALBcJ_T0089201.1 MGP_BALBcJ_G0033678.1 mouse_genomes_project 8 67907970 67917506 - Ddx49 protein_coding retained_intron MGP_BALBcJ_T0089202.1 MGP_BALBcJ_G0033678.1 mouse_genomes_project 8 67908679 67910830 - Ddx49 protein_coding retained_intron MGP_BALBcJ_T0089203.1 MGP_BALBcJ_G0033678.1 mouse_genomes_project 8 67909890 67917531 - MGP_BALBcJ_P0089203 Ddx49 protein_coding unknown_likely_coding MGP_BALBcJ_T0089204.1 MGP_BALBcJ_G0033678.1 mouse_genomes_project 8 67910912 67917517 - Ddx49 protein_coding retained_intron MGP_BALBcJ_T0089205.1 MGP_BALBcJ_G0033678.1 mouse_genomes_project 8 67915961 67917488 - Ddx49 protein_coding retained_intron MGP_BALBcJ_T0088212.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10190863 10233464 + MGP_BALBcJ_P0088212 Cul4a protein_coding protein_coding MGP_BALBcJ_T0088213.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10190982 10209504 + MGP_BALBcJ_P0088213 Cul4a protein_coding protein_coding MGP_BALBcJ_T0088214.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10191178 10207028 + Cul4a protein_coding retained_intron MGP_BALBcJ_T0088215.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10208806 10232886 + MGP_BALBcJ_P0088215 Cul4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088216.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10225366 10228116 + Cul4a protein_coding retained_intron MGP_BALBcJ_T0088217.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10225830 10232143 + Cul4a protein_coding processed_transcript MGP_BALBcJ_T0088218.1 MGP_BALBcJ_G0033353.1 mouse_genomes_project 8 10229748 10233464 + Cul4a protein_coding retained_intron MGP_BALBcJ_T0088856.1 MGP_BALBcJ_G0033577.1 mouse_genomes_project 8 45197539 45205520 - MGP_BALBcJ_P0088856 Ing2 protein_coding protein_coding MGP_BALBcJ_T0088857.1 MGP_BALBcJ_G0033577.1 mouse_genomes_project 8 45197539 45204051 - MGP_BALBcJ_P0088857 Ing2 protein_coding protein_coding MGP_BALBcJ_T0088858.1 MGP_BALBcJ_G0033577.1 mouse_genomes_project 8 45199116 45205918 - MGP_BALBcJ_P0088858 Ing2 protein_coding protein_coding MGP_BALBcJ_T0090274.1 MGP_BALBcJ_G0034026.1 mouse_genomes_project 8 103813284 103858383 + Ctcf protein_coding processed_transcript MGP_BALBcJ_T0090275.1 MGP_BALBcJ_G0034026.1 mouse_genomes_project 8 103813295 103859658 + MGP_BALBcJ_P0090275 Ctcf protein_coding protein_coding MGP_BALBcJ_T0090276.1 MGP_BALBcJ_G0034026.1 mouse_genomes_project 8 103813651 103840680 + Ctcf protein_coding processed_transcript MGP_BALBcJ_T0090277.1 MGP_BALBcJ_G0034026.1 mouse_genomes_project 8 103813782 103840397 + Ctcf protein_coding processed_transcript MGP_BALBcJ_T0090278.1 MGP_BALBcJ_G0034026.1 mouse_genomes_project 8 103852759 103857353 + Ctcf protein_coding retained_intron MGP_BALBcJ_T0090279.1 MGP_BALBcJ_G0034026.1 mouse_genomes_project 8 103852759 103856316 + Ctcf protein_coding processed_transcript MGP_BALBcJ_T0010971.1 MGP_BALBcJ_G0009096.1 mouse_genomes_project 8 82746083 82746170 + Mir7070 miRNA miRNA MGP_BALBcJ_T0088732.1 MGP_BALBcJ_G0033544.1 mouse_genomes_project 8 40746298 40758898 - MGP_BALBcJ_P0088732 Zfp42 protein_coding protein_coding MGP_BALBcJ_T0101435.1 MGP_BALBcJ_G0039471.1 mouse_genomes_project 8 127642782 127642914 + Gm22545 snoRNA snoRNA MGP_BALBcJ_T0088235.1 MGP_BALBcJ_G0033360.1 mouse_genomes_project 8 10477055 10485929 - MGP_BALBcJ_P0088235 Atp4b protein_coding protein_coding MGP_BALBcJ_T0090132.1 MGP_BALBcJ_G0033968.1 mouse_genomes_project 8 93491701 93580450 - MGP_BALBcJ_P0090132 Cnot1 protein_coding protein_coding MGP_BALBcJ_T0090133.1 MGP_BALBcJ_G0033968.1 mouse_genomes_project 8 93491701 93580450 - MGP_BALBcJ_P0090133 Cnot1 protein_coding protein_coding MGP_BALBcJ_T0088278.1 MGP_BALBcJ_G0033377.1 mouse_genomes_project 8 11814238 11816341 - MGP_BALBcJ_P0088278 protein_coding protein_coding MGP_BALBcJ_T0100131.1 MGP_BALBcJ_G0038167.1 mouse_genomes_project 8 64727509 64727633 - Gm24274 snRNA snRNA MGP_BALBcJ_T0100148.1 MGP_BALBcJ_G0038184.1 mouse_genomes_project 8 103322433 103322537 + Gm22063 snRNA snRNA MGP_BALBcJ_T0091000.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615920 123826572 + MGP_BALBcJ_P0091000 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091001.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615920 123826572 + MGP_BALBcJ_P0091001 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091002.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615920 123827273 + MGP_BALBcJ_P0091002 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091003.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615920 123826572 + MGP_BALBcJ_P0091003 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091004.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615920 123827273 + MGP_BALBcJ_P0091004 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091005.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615920 123826572 + MGP_BALBcJ_P0091005 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091006.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615934 123652971 + MGP_BALBcJ_P0091006 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091007.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123615955 123826569 + MGP_BALBcJ_P0091007 Disc1 protein_coding protein_coding MGP_BALBcJ_T0091008.1 MGP_BALBcJ_G0034258.1 mouse_genomes_project 8 123649950 123664679 + Disc1 protein_coding processed_transcript MGP_BALBcJ_T0090545.1 MGP_BALBcJ_G0034123.1 mouse_genomes_project 8 110238446 110260132 - MGP_BALBcJ_P0090545 Tmem231 protein_coding protein_coding MGP_BALBcJ_T0089112.1 MGP_BALBcJ_G0033657.1 mouse_genomes_project 8 67422164 67431393 + MGP_BALBcJ_P0089112 Lpar2 protein_coding protein_coding MGP_BALBcJ_T0089113.1 MGP_BALBcJ_G0033657.1 mouse_genomes_project 8 67422300 67431394 + MGP_BALBcJ_P0089113 Lpar2 protein_coding protein_coding MGP_BALBcJ_T0088568.1 MGP_BALBcJ_G0033486.1 mouse_genomes_project 8 26045950 26614359 - MGP_BALBcJ_P0088568 Unc5d protein_coding protein_coding MGP_BALBcJ_T0088386.1 MGP_BALBcJ_G0033432.1 mouse_genomes_project 8 19943387 19969633 - MGP_BALBcJ_P0088386 Polb protein_coding protein_coding MGP_BALBcJ_T0088634.1 MGP_BALBcJ_G0033509.1 mouse_genomes_project 8 31494325 31510929 + MGP_BALBcJ_P0088634 Saraf protein_coding protein_coding MGP_BALBcJ_T0089930.1 MGP_BALBcJ_G0033900.1 mouse_genomes_project 8 86757599 86774584 - MGP_BALBcJ_P0089930 Sall1 protein_coding protein_coding MGP_BALBcJ_T0018412.1 MGP_BALBcJ_G0015647.1 mouse_genomes_project 8 22373283 22378019 + Gm16933 processed_transcript processed_transcript MGP_BALBcJ_T0089361.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69130871 69136189 + MGP_BALBcJ_P0089361 Gtpbp3 protein_coding protein_coding MGP_BALBcJ_T0089362.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69130871 69136189 + MGP_BALBcJ_P0089362 Gtpbp3 protein_coding protein_coding MGP_BALBcJ_T0089363.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69131489 69136189 + MGP_BALBcJ_P0089363 Gtpbp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089364.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69131496 69141508 + MGP_BALBcJ_P0089364 Gtpbp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089365.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69131502 69132349 + Gtpbp3 protein_coding retained_intron MGP_BALBcJ_T0089366.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69131511 69136189 + Gtpbp3 protein_coding retained_intron MGP_BALBcJ_T0089367.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69131519 69136189 + MGP_BALBcJ_P0089367 Gtpbp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089368.1 MGP_BALBcJ_G0033728.1 mouse_genomes_project 8 69132229 69134194 + Gtpbp3 protein_coding retained_intron MGP_BALBcJ_T0088939.1 MGP_BALBcJ_G0033607.1 mouse_genomes_project 8 58076669 58113925 + MGP_BALBcJ_P0088939 Aadat protein_coding protein_coding MGP_BALBcJ_T0005335.1 MGP_BALBcJ_G0004523.1 mouse_genomes_project 8 54953415 54956664 - Gm28063 antisense antisense MGP_BALBcJ_T0005336.1 MGP_BALBcJ_G0004523.1 mouse_genomes_project 8 54953433 54956664 - Gm28063 antisense antisense MGP_BALBcJ_T0090087.1 MGP_BALBcJ_G0033952.1 mouse_genomes_project 8 92791226 92818082 + MGP_BALBcJ_P0090087 Adgrg3 protein_coding protein_coding MGP_BALBcJ_T0010946.1 MGP_BALBcJ_G0009071.1 mouse_genomes_project 8 62087384 62087494 - Mir710 miRNA miRNA MGP_BALBcJ_T0090228.1 MGP_BALBcJ_G0034007.1 mouse_genomes_project 8 103422917 103428803 + MGP_BALBcJ_P0090228 Hsf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090229.1 MGP_BALBcJ_G0034007.1 mouse_genomes_project 8 103422945 103428960 + MGP_BALBcJ_P0090229 Hsf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090230.1 MGP_BALBcJ_G0034007.1 mouse_genomes_project 8 103422990 103428775 + MGP_BALBcJ_P0090230 Hsf4 protein_coding protein_coding MGP_BALBcJ_T0090231.1 MGP_BALBcJ_G0034007.1 mouse_genomes_project 8 103422990 103428962 + MGP_BALBcJ_P0090231 Hsf4 protein_coding protein_coding MGP_BALBcJ_T0090232.1 MGP_BALBcJ_G0034007.1 mouse_genomes_project 8 103422990 103428775 + MGP_BALBcJ_P0090232 Hsf4 protein_coding protein_coding MGP_BALBcJ_T0088863.1 MGP_BALBcJ_G0033582.1 mouse_genomes_project 8 45361024 45362018 + MGP_BALBcJ_P0088863 Cldn22 protein_coding protein_coding MGP_BALBcJ_T0005377.1 MGP_BALBcJ_G0004559.1 mouse_genomes_project 8 120335161 120336095 + Gm20406 antisense antisense MGP_BALBcJ_T0098401.1 MGP_BALBcJ_G0036455.1 mouse_genomes_project 8 92736624 92741696 - pseudogene pseudogene MGP_BALBcJ_T0098400.1 MGP_BALBcJ_G0036454.1 mouse_genomes_project 8 86881760 86882662 - pseudogene pseudogene MGP_BALBcJ_T0089904.1 MGP_BALBcJ_G0033893.1 mouse_genomes_project 8 85916445 85979003 + MGP_BALBcJ_P0089904 Papd5 protein_coding protein_coding MGP_BALBcJ_T0089905.1 MGP_BALBcJ_G0033893.1 mouse_genomes_project 8 85916445 85979009 + MGP_BALBcJ_P0089905 Papd5 protein_coding protein_coding MGP_BALBcJ_T0089906.1 MGP_BALBcJ_G0033893.1 mouse_genomes_project 8 85916446 85979009 + MGP_BALBcJ_P0089906 Papd5 protein_coding protein_coding MGP_BALBcJ_T0089907.1 MGP_BALBcJ_G0033893.1 mouse_genomes_project 8 85963048 85967357 + Papd5 protein_coding retained_intron MGP_BALBcJ_T0089908.1 MGP_BALBcJ_G0033893.1 mouse_genomes_project 8 85970107 85975543 + MGP_BALBcJ_P0089908 Papd5 protein_coding protein_coding MGP_BALBcJ_T0009176.1 MGP_BALBcJ_G0007370.1 mouse_genomes_project 8 120181778 120182242 + Gm27030 lincRNA lincRNA MGP_BALBcJ_T0088384.1 MGP_BALBcJ_G0033430.1 mouse_genomes_project 8 19888477 19906662 - MGP_BALBcJ_P0088384 protein_coding protein_coding MGP_BALBcJ_T0010958.1 MGP_BALBcJ_G0009083.1 mouse_genomes_project 8 81576401 81576515 - Gm44450 miRNA miRNA MGP_BALBcJ_T0089500.1 MGP_BALBcJ_G0033774.1 mouse_genomes_project 8 73024716 73535264 + MGP_BALBcJ_P0089500 1700007B14Rik protein_coding protein_coding MGP_BALBcJ_T0089501.1 MGP_BALBcJ_G0033774.1 mouse_genomes_project 8 73025005 73535289 + MGP_BALBcJ_P0089501 1700007B14Rik protein_coding protein_coding MGP_BALBcJ_T0088114.1 MGP_BALBcJ_G0033324.1 mouse_genomes_project 8 5690854 5715182 - MGP_BALBcJ_P0088114 Arglu1 protein_coding protein_coding MGP_BALBcJ_T0101419.1 MGP_BALBcJ_G0039455.1 mouse_genomes_project 8 94088823 94088955 - Gm22780 snoRNA snoRNA MGP_BALBcJ_T0089755.1 MGP_BALBcJ_G0033852.1 mouse_genomes_project 8 82543820 82560834 + MGP_BALBcJ_P0089755 Syce2 protein_coding protein_coding MGP_BALBcJ_T0089756.1 MGP_BALBcJ_G0033852.1 mouse_genomes_project 8 82543820 82561599 + MGP_BALBcJ_P0089756 Syce2 protein_coding protein_coding MGP_BALBcJ_T0089757.1 MGP_BALBcJ_G0033852.1 mouse_genomes_project 8 82543899 82560844 + MGP_BALBcJ_P0089757 Syce2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089758.1 MGP_BALBcJ_G0033852.1 mouse_genomes_project 8 82544144 82559369 + Syce2 protein_coding retained_intron MGP_BALBcJ_T0090999.1 MGP_BALBcJ_G0034257.1 mouse_genomes_project 8 123577525 123595941 + MGP_BALBcJ_P0090999 Tsnax protein_coding protein_coding MGP_BALBcJ_T0089531.1 MGP_BALBcJ_G0033784.1 mouse_genomes_project 8 76381764 76398212 - MGP_BALBcJ_P0089531 Lsm6 protein_coding protein_coding MGP_BALBcJ_T0089532.1 MGP_BALBcJ_G0033784.1 mouse_genomes_project 8 76383350 76398212 - MGP_BALBcJ_P0089532 Lsm6 protein_coding protein_coding MGP_BALBcJ_T0089533.1 MGP_BALBcJ_G0033784.1 mouse_genomes_project 8 76384936 76387110 - Lsm6 protein_coding retained_intron MGP_BALBcJ_T0089534.1 MGP_BALBcJ_G0033784.1 mouse_genomes_project 8 76384957 76390114 - Lsm6 protein_coding retained_intron MGP_BALBcJ_T0089623.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81362854 81380964 - MGP_BALBcJ_P0089623 Adgre5 protein_coding protein_coding MGP_BALBcJ_T0089624.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81362965 81380807 - MGP_BALBcJ_P0089624 Adgre5 protein_coding protein_coding MGP_BALBcJ_T0089625.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81362967 81380811 - MGP_BALBcJ_P0089625 Adgre5 protein_coding protein_coding MGP_BALBcJ_T0089626.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81363421 81364434 - Adgre5 protein_coding retained_intron MGP_BALBcJ_T0089627.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81364851 81367933 - Adgre5 protein_coding retained_intron MGP_BALBcJ_T0089628.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81367176 81367959 - Adgre5 protein_coding retained_intron MGP_BALBcJ_T0089629.1 MGP_BALBcJ_G0033816.1 mouse_genomes_project 8 81373169 81380821 - MGP_BALBcJ_P0089629 Adgre5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0090452.1 MGP_BALBcJ_G0034099.1 mouse_genomes_project 8 109000858 109021147 + MGP_BALBcJ_P0090452 Mtss1l protein_coding protein_coding MGP_BALBcJ_T0090453.1 MGP_BALBcJ_G0034099.1 mouse_genomes_project 8 109001104 109018824 + MGP_BALBcJ_P0090453 Mtss1l protein_coding protein_coding MGP_BALBcJ_T0090454.1 MGP_BALBcJ_G0034099.1 mouse_genomes_project 8 109006338 109011918 + Mtss1l protein_coding processed_transcript MGP_BALBcJ_T0090455.1 MGP_BALBcJ_G0034099.1 mouse_genomes_project 8 109007267 109017400 + MGP_BALBcJ_P0090455 Mtss1l protein_coding protein_coding MGP_BALBcJ_T0090456.1 MGP_BALBcJ_G0034099.1 mouse_genomes_project 8 109007278 109017820 + MGP_BALBcJ_P0090456 Mtss1l protein_coding protein_coding MGP_BALBcJ_T0090457.1 MGP_BALBcJ_G0034099.1 mouse_genomes_project 8 109016863 109018128 + Mtss1l protein_coding retained_intron MGP_BALBcJ_T0090078.1 MGP_BALBcJ_G0033949.1 mouse_genomes_project 8 92673091 92688374 - MGP_BALBcJ_P0090078 Ccdc102a protein_coding protein_coding MGP_BALBcJ_T0090079.1 MGP_BALBcJ_G0033949.1 mouse_genomes_project 8 92683841 92687798 - MGP_BALBcJ_P0090079 Ccdc102a protein_coding protein_coding MGP_BALBcJ_T0088906.1 MGP_BALBcJ_G0033594.1 mouse_genomes_project 8 52566370 52680689 + MGP_BALBcJ_P0088906 Gpm6a protein_coding protein_coding MGP_BALBcJ_T0090575.1 MGP_BALBcJ_G0034134.1 mouse_genomes_project 8 112800727 112808695 + MGP_BALBcJ_P0090575 Clec3a protein_coding protein_coding MGP_BALBcJ_T0002340.1 MGP_BALBcJ_G0002250.1 mouse_genomes_project 8 121964930 121965583 - TEC TEC MGP_BALBcJ_T0009149.1 MGP_BALBcJ_G0007349.1 mouse_genomes_project 8 103314522 103320308 + Gm3830 lincRNA lincRNA MGP_BALBcJ_T0088938.1 MGP_BALBcJ_G0033606.1 mouse_genomes_project 8 58003255 58074042 - MGP_BALBcJ_P0088938 Gm10283 protein_coding protein_coding MGP_BALBcJ_T0089606.1 MGP_BALBcJ_G0033813.1 mouse_genomes_project 8 81303653 81308089 + Ptger1 protein_coding retained_intron MGP_BALBcJ_T0089607.1 MGP_BALBcJ_G0033813.1 mouse_genomes_project 8 81303683 81309571 + MGP_BALBcJ_P0089607 Ptger1 protein_coding protein_coding MGP_BALBcJ_T0018415.1 MGP_BALBcJ_G0015649.1 mouse_genomes_project 8 38449123 38455832 + B430010I23Rik processed_transcript processed_transcript MGP_BALBcJ_T0018416.1 MGP_BALBcJ_G0015649.1 mouse_genomes_project 8 38449393 38452191 + B430010I23Rik processed_transcript processed_transcript MGP_BALBcJ_T0010938.1 MGP_BALBcJ_G0009063.1 mouse_genomes_project 8 22498411 22498520 - Mir8108 miRNA miRNA MGP_BALBcJ_T0018456.1 MGP_BALBcJ_G0015665.1 mouse_genomes_project 8 109422502 109439097 - 9430091E24Rik processed_transcript processed_transcript MGP_BALBcJ_T0018457.1 MGP_BALBcJ_G0015665.1 mouse_genomes_project 8 109422692 109439118 - 9430091E24Rik processed_transcript processed_transcript MGP_BALBcJ_T0089273.1 MGP_BALBcJ_G0033698.1 mouse_genomes_project 8 68335578 68338485 + MGP_BALBcJ_P0089273 Jund protein_coding protein_coding MGP_BALBcJ_T0015975.1 MGP_BALBcJ_G0014072.1 mouse_genomes_project 8 92183960 92184549 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089764.1 MGP_BALBcJ_G0033854.1 mouse_genomes_project 8 82574972 82578342 + MGP_BALBcJ_P0089764 Klf1 protein_coding protein_coding MGP_BALBcJ_T0002336.1 MGP_BALBcJ_G0002246.1 mouse_genomes_project 8 119034570 119035405 - TEC TEC MGP_BALBcJ_T0089972.1 MGP_BALBcJ_G0033914.1 mouse_genomes_project 8 90720744 90761475 + MGP_BALBcJ_P0089972 Slc6a2 protein_coding protein_coding MGP_BALBcJ_T0089973.1 MGP_BALBcJ_G0033914.1 mouse_genomes_project 8 90721713 90764223 + MGP_BALBcJ_P0089973 Slc6a2 protein_coding protein_coding MGP_BALBcJ_T0088059.1 MGP_BALBcJ_G0033307.1 mouse_genomes_project 8 1197858 1205455 - MGP_BALBcJ_P0088059 Prr36 protein_coding protein_coding MGP_BALBcJ_T0088060.1 MGP_BALBcJ_G0033307.1 mouse_genomes_project 8 1203191 1205055 - MGP_BALBcJ_P0088060 Prr36 protein_coding protein_coding MGP_BALBcJ_T0088061.1 MGP_BALBcJ_G0033307.1 mouse_genomes_project 8 1204114 1205295 - MGP_BALBcJ_P0088061 Prr36 protein_coding protein_coding MGP_BALBcJ_T0088062.1 MGP_BALBcJ_G0033307.1 mouse_genomes_project 8 1204550 1205602 - MGP_BALBcJ_P0088062 Prr36 protein_coding protein_coding MGP_BALBcJ_T0015972.1 MGP_BALBcJ_G0014069.1 mouse_genomes_project 8 82524524 82524908 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009062.1 MGP_BALBcJ_G0007286.1 mouse_genomes_project 8 24992036 25008925 + Gm1698 lincRNA lincRNA MGP_BALBcJ_T0090837.1 MGP_BALBcJ_G0034208.1 mouse_genomes_project 8 121141137 121145958 + MGP_BALBcJ_P0090837 Trappc2l protein_coding protein_coding MGP_BALBcJ_T0091025.1 MGP_BALBcJ_G0034263.1 mouse_genomes_project 8 124486559 124523539 + MGP_BALBcJ_P0091025 BC021891 protein_coding protein_coding MGP_BALBcJ_T0090628.1 MGP_BALBcJ_G0034155.1 mouse_genomes_project 8 117907473 117916430 + MGP_BALBcJ_P0090628 Osgin1 protein_coding protein_coding MGP_BALBcJ_T0090629.1 MGP_BALBcJ_G0034155.1 mouse_genomes_project 8 117910471 117916369 + Osgin1 protein_coding processed_transcript MGP_BALBcJ_T0090630.1 MGP_BALBcJ_G0034155.1 mouse_genomes_project 8 117910516 117919608 + Osgin1 protein_coding retained_intron MGP_BALBcJ_T0090631.1 MGP_BALBcJ_G0034155.1 mouse_genomes_project 8 117910538 117918409 + Osgin1 protein_coding retained_intron MGP_BALBcJ_T0090632.1 MGP_BALBcJ_G0034155.1 mouse_genomes_project 8 117914788 117919257 + MGP_BALBcJ_P0090632 Osgin1 protein_coding protein_coding MGP_BALBcJ_T0090134.1 MGP_BALBcJ_G0033969.1 mouse_genomes_project 8 93608832 93626724 - MGP_BALBcJ_P0090134 Slc38a7 protein_coding unknown_likely_coding MGP_BALBcJ_T0090135.1 MGP_BALBcJ_G0033969.1 mouse_genomes_project 8 93612775 93614575 - Slc38a7 protein_coding retained_intron MGP_BALBcJ_T0090136.1 MGP_BALBcJ_G0033969.1 mouse_genomes_project 8 93614773 93616749 - Slc38a7 protein_coding retained_intron MGP_BALBcJ_T0090478.1 MGP_BALBcJ_G0034104.1 mouse_genomes_project 8 109203391 109257049 + MGP_BALBcJ_P0090478 St3gal2 protein_coding protein_coding MGP_BALBcJ_T0090479.1 MGP_BALBcJ_G0034104.1 mouse_genomes_project 8 109203391 109254377 + MGP_BALBcJ_P0090479 St3gal2 protein_coding protein_coding MGP_BALBcJ_T0090480.1 MGP_BALBcJ_G0034104.1 mouse_genomes_project 8 109203427 109241548 + St3gal2 protein_coding processed_transcript MGP_BALBcJ_T0090481.1 MGP_BALBcJ_G0034104.1 mouse_genomes_project 8 109216517 109241747 + St3gal2 protein_coding processed_transcript MGP_BALBcJ_T0090482.1 MGP_BALBcJ_G0034104.1 mouse_genomes_project 8 109225471 109241573 + St3gal2 protein_coding processed_transcript MGP_BALBcJ_T0101393.1 MGP_BALBcJ_G0039429.1 mouse_genomes_project 8 46525038 46525170 - Gm25830 snoRNA snoRNA MGP_BALBcJ_T0088353.1 MGP_BALBcJ_G0033413.1 mouse_genomes_project 8 19238853 19241765 - MGP_BALBcJ_P0088353 Defb15 protein_coding protein_coding MGP_BALBcJ_T0088966.1 MGP_BALBcJ_G0033613.1 mouse_genomes_project 8 59043795 59059610 + MGP_BALBcJ_P0088966 Cbr4 protein_coding protein_coding MGP_BALBcJ_T0088967.1 MGP_BALBcJ_G0033613.1 mouse_genomes_project 8 59043796 59047644 + MGP_BALBcJ_P0088967 Cbr4 protein_coding protein_coding MGP_BALBcJ_T0088968.1 MGP_BALBcJ_G0033613.1 mouse_genomes_project 8 59043816 59047962 + Cbr4 protein_coding retained_intron MGP_BALBcJ_T0088969.1 MGP_BALBcJ_G0033613.1 mouse_genomes_project 8 59043830 59059457 + Cbr4 protein_coding retained_intron MGP_BALBcJ_T0088970.1 MGP_BALBcJ_G0033613.1 mouse_genomes_project 8 59047466 59059457 + Cbr4 protein_coding retained_intron MGP_BALBcJ_T0088971.1 MGP_BALBcJ_G0033613.1 mouse_genomes_project 8 59050913 59059517 + Cbr4 protein_coding retained_intron MGP_BALBcJ_T0089294.1 MGP_BALBcJ_G0033708.1 mouse_genomes_project 8 68475095 68479742 - MGP_BALBcJ_P0089294 Arrdc2 protein_coding protein_coding MGP_BALBcJ_T0089299.1 MGP_BALBcJ_G0033711.1 mouse_genomes_project 8 68508149 68513452 - MGP_BALBcJ_P0089299 Ccdc124 protein_coding protein_coding MGP_BALBcJ_T0088387.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19975405 20022756 - MGP_BALBcJ_P0088387 Ikbkb protein_coding protein_coding MGP_BALBcJ_T0088388.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19975406 20022718 - MGP_BALBcJ_P0088388 Ikbkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088389.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19975406 20022712 - MGP_BALBcJ_P0088389 Ikbkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0088390.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19975961 20022767 - MGP_BALBcJ_P0088390 Ikbkb protein_coding protein_coding MGP_BALBcJ_T0088391.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19976301 19977676 - MGP_BALBcJ_P0088391 Ikbkb protein_coding protein_coding MGP_BALBcJ_T0088392.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19976550 20022756 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088393.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19984204 19985220 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088394.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19992177 20022718 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088395.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19997407 20022717 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088396.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 19998952 20010251 - MGP_BALBcJ_P0088396 Ikbkb protein_coding protein_coding MGP_BALBcJ_T0088397.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 20005316 20022737 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088398.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 20008025 20022752 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088399.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 20018189 20022741 - Ikbkb protein_coding retained_intron MGP_BALBcJ_T0088400.1 MGP_BALBcJ_G0033433.1 mouse_genomes_project 8 20018633 20022703 - Ikbkb protein_coding processed_transcript MGP_BALBcJ_T0090943.1 MGP_BALBcJ_G0034234.1 mouse_genomes_project 8 122372961 122402379 + MGP_BALBcJ_P0090943 Rab4a protein_coding protein_coding MGP_BALBcJ_T0090944.1 MGP_BALBcJ_G0034234.1 mouse_genomes_project 8 122373044 122401574 + MGP_BALBcJ_P0090944 Rab4a protein_coding protein_coding MGP_BALBcJ_T0090658.1 MGP_BALBcJ_G0034168.1 mouse_genomes_project 8 118352011 118366622 + MGP_BALBcJ_P0090658 Klhl36 protein_coding protein_coding MGP_BALBcJ_T0015982.1 MGP_BALBcJ_G0014079.1 mouse_genomes_project 8 102972836 102973861 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0089604.1 MGP_BALBcJ_G0033811.1 mouse_genomes_project 8 81243053 81246807 + MGP_BALBcJ_P0089604 Dnajb1 protein_coding protein_coding MGP_BALBcJ_T0101406.1 MGP_BALBcJ_G0039442.1 mouse_genomes_project 8 68535617 68535748 - Snora68 snoRNA snoRNA MGP_BALBcJ_T0088533.1 MGP_BALBcJ_G0033471.1 mouse_genomes_project 8 23378258 23475585 - MGP_BALBcJ_P0088533 Hook3 protein_coding protein_coding MGP_BALBcJ_T0088534.1 MGP_BALBcJ_G0033471.1 mouse_genomes_project 8 23395000 23427115 - MGP_BALBcJ_P0088534 Hook3 protein_coding protein_coding MGP_BALBcJ_T0088535.1 MGP_BALBcJ_G0033471.1 mouse_genomes_project 8 23395009 23401311 - Hook3 protein_coding retained_intron MGP_BALBcJ_T0090199.1 MGP_BALBcJ_G0033998.1 mouse_genomes_project 8 103140733 103153209 + MGP_BALBcJ_P0090199 Ces2h protein_coding protein_coding MGP_BALBcJ_T0101373.1 MGP_BALBcJ_G0039409.1 mouse_genomes_project 8 12296109 12296242 - Gm24231 snoRNA snoRNA MGP_BALBcJ_T0089038.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65238464 65529130 - MGP_BALBcJ_P0089038 Psd3 protein_coding protein_coding MGP_BALBcJ_T0089039.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65238464 65529130 - MGP_BALBcJ_P0089039 Psd3 protein_coding protein_coding MGP_BALBcJ_T0089040.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65238471 65368271 - MGP_BALBcJ_P0089040 Psd3 protein_coding protein_coding MGP_BALBcJ_T0089041.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65245429 65529130 - MGP_BALBcJ_P0089041 Psd3 protein_coding protein_coding MGP_BALBcJ_T0089042.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65246263 65465683 - MGP_BALBcJ_P0089042 Psd3 protein_coding protein_coding MGP_BALBcJ_T0089043.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65260908 65368209 - MGP_BALBcJ_P0089043 Psd3 protein_coding protein_coding MGP_BALBcJ_T0089044.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65342951 65614680 - Psd3 protein_coding retained_intron MGP_BALBcJ_T0089045.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65433064 65458871 - Psd3 protein_coding processed_transcript MGP_BALBcJ_T0089046.1 MGP_BALBcJ_G0033637.1 mouse_genomes_project 8 65458398 65506447 - Psd3 protein_coding retained_intron MGP_BALBcJ_T0100118.1 MGP_BALBcJ_G0038154.1 mouse_genomes_project 8 33788906 33789057 - Gm26150 snRNA snRNA MGP_BALBcJ_T0090025.1 MGP_BALBcJ_G0033932.1 mouse_genomes_project 8 91951853 91953090 + MGP_BALBcJ_P0090025 Mt1 protein_coding protein_coding MGP_BALBcJ_T0088328.1 MGP_BALBcJ_G0033391.1 mouse_genomes_project 8 16081439 16093054 - MGP_BALBcJ_P0088328 Defb39 protein_coding protein_coding MGP_BALBcJ_T0089886.1 MGP_BALBcJ_G0033889.1 mouse_genomes_project 8 85272327 85297780 + MGP_BALBcJ_P0089886 4933402J07Rik protein_coding protein_coding MGP_BALBcJ_T0088250.1 MGP_BALBcJ_G0033366.1 mouse_genomes_project 8 10800306 10826730 + MGP_BALBcJ_P0088250 4932443I19Rik protein_coding protein_coding MGP_BALBcJ_T0089856.1 MGP_BALBcJ_G0033881.1 mouse_genomes_project 8 83402156 83530742 - MGP_BALBcJ_P0089856 Itfg1 protein_coding protein_coding MGP_BALBcJ_T0101413.1 MGP_BALBcJ_G0039449.1 mouse_genomes_project 8 84670763 84670880 - Gm24781 snoRNA snoRNA MGP_BALBcJ_T0089640.1 MGP_BALBcJ_G0033819.1 mouse_genomes_project 8 81601064 81616691 + MGP_BALBcJ_P0089640 Asf1b protein_coding protein_coding MGP_BALBcJ_T0089641.1 MGP_BALBcJ_G0033819.1 mouse_genomes_project 8 81601271 81614339 + Asf1b protein_coding processed_transcript MGP_BALBcJ_T0089642.1 MGP_BALBcJ_G0033819.1 mouse_genomes_project 8 81611392 81615037 + Asf1b protein_coding retained_intron MGP_BALBcJ_T0009139.1 MGP_BALBcJ_G0007343.1 mouse_genomes_project 8 90094766 90097505 - Gm21817 lincRNA lincRNA MGP_BALBcJ_T0089063.1 MGP_BALBcJ_G0033641.1 mouse_genomes_project 8 66443604 66470283 + MGP_BALBcJ_P0089063 Lpl protein_coding protein_coding MGP_BALBcJ_T0089064.1 MGP_BALBcJ_G0033641.1 mouse_genomes_project 8 66443668 66470796 + MGP_BALBcJ_P0089064 Lpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0089065.1 MGP_BALBcJ_G0033641.1 mouse_genomes_project 8 66443770 66452953 + Lpl protein_coding retained_intron MGP_BALBcJ_T0089066.1 MGP_BALBcJ_G0033641.1 mouse_genomes_project 8 66454025 66459099 + Lpl protein_coding processed_transcript MGP_BALBcJ_T0010989.1 MGP_BALBcJ_G0009114.1 mouse_genomes_project 8 105796502 105796572 + Mir140 miRNA miRNA MGP_BALBcJ_T0011700.1 MGP_BALBcJ_G0009825.1 mouse_genomes_project 8 62505482 62505573 + Gm26210 misc_RNA misc_RNA MGP_BALBcJ_T0089975.1 MGP_BALBcJ_G0033916.1 mouse_genomes_project 8 90817935 90841334 - MGP_BALBcJ_P0089975 Ces1b protein_coding protein_coding MGP_BALBcJ_T0090239.1 MGP_BALBcJ_G0034013.1 mouse_genomes_project 8 103467454 103477338 - MGP_BALBcJ_P0090239 protein_coding protein_coding MGP_BALBcJ_T0090487.1 MGP_BALBcJ_G0034106.1 mouse_genomes_project 8 109288454 109315813 - MGP_BALBcJ_P0090487 Ddx19b protein_coding protein_coding MGP_BALBcJ_T0090488.1 MGP_BALBcJ_G0034106.1 mouse_genomes_project 8 109292047 109321187 - MGP_BALBcJ_P0090488 Ddx19b protein_coding protein_coding MGP_BALBcJ_T0090305.1 MGP_BALBcJ_G0034040.1 mouse_genomes_project 8 104080317 104112348 + MGP_BALBcJ_P0090305 Pskh1 protein_coding protein_coding MGP_BALBcJ_T0091229.1 MGP_BALBcJ_G0034331.1 mouse_genomes_project 9 11684780 11724692 - MGP_BALBcJ_P0091229 Panx1 protein_coding protein_coding MGP_BALBcJ_T0091230.1 MGP_BALBcJ_G0034331.1 mouse_genomes_project 9 11684782 11725133 - MGP_BALBcJ_P0091230 Panx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091231.1 MGP_BALBcJ_G0034331.1 mouse_genomes_project 9 11686915 11689506 - Panx1 protein_coding retained_intron MGP_BALBcJ_T0011087.1 MGP_BALBcJ_G0009212.1 mouse_genomes_project 9 117113572 117113662 + Mir26a-1 miRNA miRNA MGP_BALBcJ_T0094078.1 MGP_BALBcJ_G0035190.1 mouse_genomes_project 9 103249565 103393948 - MGP_BALBcJ_P0094078 protein_coding protein_coding MGP_BALBcJ_T0094079.1 MGP_BALBcJ_G0035190.1 mouse_genomes_project 9 103251183 103393873 - MGP_BALBcJ_P0094079 protein_coding protein_coding MGP_BALBcJ_T0094080.1 MGP_BALBcJ_G0035190.1 mouse_genomes_project 9 103338268 103373665 - MGP_BALBcJ_P0094080 protein_coding protein_coding MGP_BALBcJ_T0092855.1 MGP_BALBcJ_G0034929.1 mouse_genomes_project 9 62648832 62651801 - MGP_BALBcJ_P0092855 Kbtbd13 protein_coding protein_coding MGP_BALBcJ_T0094245.1 MGP_BALBcJ_G0035224.1 mouse_genomes_project 9 104905378 104914038 + MGP_BALBcJ_P0094245 6430571L13Rik protein_coding protein_coding MGP_BALBcJ_T0094246.1 MGP_BALBcJ_G0035224.1 mouse_genomes_project 9 104912505 104916671 + 6430571L13Rik protein_coding processed_transcript MGP_BALBcJ_T0092853.1 MGP_BALBcJ_G0034927.1 mouse_genomes_project 9 62605471 62619020 + MGP_BALBcJ_P0092853 Pdcd7 protein_coding protein_coding MGP_BALBcJ_T0091926.1 MGP_BALBcJ_G0034642.1 mouse_genomes_project 9 37857772 37861662 + MGP_BALBcJ_P0091926 Bsx protein_coding protein_coding MGP_BALBcJ_T0093754.1 MGP_BALBcJ_G0035122.1 mouse_genomes_project 9 94414621 94489983 - MGP_BALBcJ_P0093754 Spsb4 protein_coding protein_coding MGP_BALBcJ_T0093755.1 MGP_BALBcJ_G0035122.1 mouse_genomes_project 9 94414624 94455283 - Spsb4 protein_coding processed_transcript MGP_BALBcJ_T0093756.1 MGP_BALBcJ_G0035122.1 mouse_genomes_project 9 94415111 94443063 - Spsb4 protein_coding processed_transcript MGP_BALBcJ_T0093757.1 MGP_BALBcJ_G0035122.1 mouse_genomes_project 9 94465156 94489904 - Spsb4 protein_coding retained_intron MGP_BALBcJ_T0091592.1 MGP_BALBcJ_G0034483.1 mouse_genomes_project 9 27772668 27793105 + MGP_BALBcJ_P0091592 Adamts8 protein_coding protein_coding MGP_BALBcJ_T0091593.1 MGP_BALBcJ_G0034483.1 mouse_genomes_project 9 27773564 27794087 + MGP_BALBcJ_P0091593 Adamts8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093242.1 MGP_BALBcJ_G0035008.1 mouse_genomes_project 9 72568281 72642916 + MGP_BALBcJ_P0093242 Myo5c protein_coding protein_coding MGP_BALBcJ_T0101493.1 MGP_BALBcJ_G0039529.1 mouse_genomes_project 9 94920080 94920207 - Gm25607 snoRNA snoRNA MGP_BALBcJ_T0091414.1 MGP_BALBcJ_G0034417.1 mouse_genomes_project 9 18066934 18069681 - MGP_BALBcJ_P0091414 Cdkn2d protein_coding protein_coding MGP_BALBcJ_T0005389.1 MGP_BALBcJ_G0004570.1 mouse_genomes_project 9 5958317 5985499 + Gm16833 antisense antisense MGP_BALBcJ_T0005390.1 MGP_BALBcJ_G0004570.1 mouse_genomes_project 9 5985298 5985499 + Gm16833 antisense antisense MGP_BALBcJ_T0016061.1 MGP_BALBcJ_G0014158.1 mouse_genomes_project 9 80883117 80883505 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091798.1 MGP_BALBcJ_G0034547.1 mouse_genomes_project 9 34799725 34800776 + MGP_BALBcJ_P0091798 Olfr145 protein_coding protein_coding MGP_BALBcJ_T0094417.1 MGP_BALBcJ_G0035247.1 mouse_genomes_project 9 105509699 105524218 + MGP_BALBcJ_P0094417 Camkv protein_coding protein_coding MGP_BALBcJ_T0094418.1 MGP_BALBcJ_G0035247.1 mouse_genomes_project 9 105509923 105524204 + Camkv protein_coding retained_intron MGP_BALBcJ_T0094419.1 MGP_BALBcJ_G0035247.1 mouse_genomes_project 9 105509933 105520722 + MGP_BALBcJ_P0094419 Camkv protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094420.1 MGP_BALBcJ_G0035247.1 mouse_genomes_project 9 105511325 105520071 + MGP_BALBcJ_P0094420 Camkv protein_coding protein_coding MGP_BALBcJ_T0094421.1 MGP_BALBcJ_G0035247.1 mouse_genomes_project 9 105519792 105524210 + MGP_BALBcJ_P0094421 Camkv protein_coding protein_coding MGP_BALBcJ_T0093767.1 MGP_BALBcJ_G0035126.1 mouse_genomes_project 9 95766939 95877973 + MGP_BALBcJ_P0093767 Nmnat3 protein_coding protein_coding MGP_BALBcJ_T0093768.1 MGP_BALBcJ_G0035126.1 mouse_genomes_project 9 95766959 95845631 + Nmnat3 protein_coding processed_transcript MGP_BALBcJ_T0093769.1 MGP_BALBcJ_G0035126.1 mouse_genomes_project 9 95776099 95832941 + Nmnat3 protein_coding retained_intron MGP_BALBcJ_T0093770.1 MGP_BALBcJ_G0035126.1 mouse_genomes_project 9 95776099 95899013 + MGP_BALBcJ_P0093770 Nmnat3 protein_coding protein_coding MGP_BALBcJ_T0093772.1 MGP_BALBcJ_G0035126.1 mouse_genomes_project 9 95831239 95889122 + MGP_BALBcJ_P0093772 Nmnat3 protein_coding protein_coding MGP_BALBcJ_T0005388.1 MGP_BALBcJ_G0004569.1 mouse_genomes_project 9 4371264 4399427 - AV064505 antisense antisense MGP_BALBcJ_T0100210.1 MGP_BALBcJ_G0038246.1 mouse_genomes_project 9 81615635 81615820 + Gm26146 snRNA snRNA MGP_BALBcJ_T0091193.1 MGP_BALBcJ_G0034318.1 mouse_genomes_project 9 10471470 10490321 + MGP_BALBcJ_P0091193 Fam76b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091194.1 MGP_BALBcJ_G0034318.1 mouse_genomes_project 9 10471470 10490321 + MGP_BALBcJ_P0091194 Fam76b protein_coding protein_coding MGP_BALBcJ_T0091195.1 MGP_BALBcJ_G0034318.1 mouse_genomes_project 9 10471489 10475012 + Fam76b protein_coding retained_intron MGP_BALBcJ_T0091196.1 MGP_BALBcJ_G0034318.1 mouse_genomes_project 9 10480457 10483821 + Fam76b protein_coding retained_intron MGP_BALBcJ_T0009331.1 MGP_BALBcJ_G0007494.1 mouse_genomes_project 9 120429637 120435309 - lincRNA lincRNA MGP_BALBcJ_T0094525.1 MGP_BALBcJ_G0035263.1 mouse_genomes_project 9 105903337 105908079 + Amt protein_coding processed_transcript MGP_BALBcJ_T0094526.1 MGP_BALBcJ_G0035263.1 mouse_genomes_project 9 105903354 105908803 + MGP_BALBcJ_P0094526 Amt protein_coding protein_coding MGP_BALBcJ_T0094527.1 MGP_BALBcJ_G0035263.1 mouse_genomes_project 9 105903394 105904016 + Amt protein_coding retained_intron MGP_BALBcJ_T0094528.1 MGP_BALBcJ_G0035263.1 mouse_genomes_project 9 105903406 105905931 + Amt protein_coding retained_intron MGP_BALBcJ_T0101455.1 MGP_BALBcJ_G0039491.1 mouse_genomes_project 9 30794881 30795012 + Gm25439 snoRNA snoRNA MGP_BALBcJ_T0009240.1 MGP_BALBcJ_G0007423.1 mouse_genomes_project 9 67094164 67167857 + B230323A14Rik lincRNA lincRNA MGP_BALBcJ_T0009241.1 MGP_BALBcJ_G0007423.1 mouse_genomes_project 9 67096560 67167211 + B230323A14Rik lincRNA lincRNA MGP_BALBcJ_T0002456.1 MGP_BALBcJ_G0002365.1 mouse_genomes_project 9 106154949 106156095 + TEC TEC MGP_BALBcJ_T0092257.1 MGP_BALBcJ_G0034754.1 mouse_genomes_project 9 47707654 47715166 - MGP_BALBcJ_P0092257 Sdhd protein_coding protein_coding MGP_BALBcJ_T0005430.1 MGP_BALBcJ_G0004597.1 mouse_genomes_project 9 54259028 54290359 - Man2c1os antisense antisense MGP_BALBcJ_T0005431.1 MGP_BALBcJ_G0004597.1 mouse_genomes_project 9 54287183 54289967 - Man2c1os antisense antisense MGP_BALBcJ_T0005432.1 MGP_BALBcJ_G0004597.1 mouse_genomes_project 9 54289051 54290313 - Man2c1os antisense antisense MGP_BALBcJ_T0092701.1 MGP_BALBcJ_G0034884.1 mouse_genomes_project 9 57917601 57936505 + MGP_BALBcJ_P0092701 Larp6 protein_coding protein_coding MGP_BALBcJ_T0093786.1 MGP_BALBcJ_G0035132.1 mouse_genomes_project 9 96334905 96336665 + MGP_BALBcJ_P0093786 protein_coding protein_coding MGP_BALBcJ_T0091076.1 MGP_BALBcJ_G0034281.1 mouse_genomes_project 9 1056970 1060297 + MGP_BALBcJ_P0091076 Msantd4 protein_coding protein_coding MGP_BALBcJ_T0092253.1 MGP_BALBcJ_G0034751.1 mouse_genomes_project 9 47643048 47663988 - MGP_BALBcJ_P0092253 Bco2 protein_coding unknown_likely_coding MGP_BALBcJ_T0091342.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17390229 17409173 - MGP_BALBcJ_P0091342 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091343.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17390341 17411607 - Fbxl12 protein_coding processed_transcript MGP_BALBcJ_T0091344.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17404650 17411615 - MGP_BALBcJ_P0091344 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091345.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17404687 17406242 - MGP_BALBcJ_P0091345 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091346.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17404687 17411607 - MGP_BALBcJ_P0091346 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091347.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17404688 17411615 - MGP_BALBcJ_P0091347 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091348.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17404690 17411627 - MGP_BALBcJ_P0091348 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091349.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17404690 17409666 - MGP_BALBcJ_P0091349 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091350.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17405702 17411618 - MGP_BALBcJ_P0091350 Fbxl12 protein_coding protein_coding MGP_BALBcJ_T0091351.1 MGP_BALBcJ_G0034391.1 mouse_genomes_project 9 17408422 17411602 - Fbxl12 protein_coding retained_intron MGP_BALBcJ_T0101453.1 MGP_BALBcJ_G0039489.1 mouse_genomes_project 9 22372289 22372398 - Gm25861 snoRNA snoRNA MGP_BALBcJ_T0092816.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61640084 61950410 + MGP_BALBcJ_P0092816 Megf11 protein_coding protein_coding MGP_BALBcJ_T0092817.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61640084 61958640 + MGP_BALBcJ_P0092817 Megf11 protein_coding protein_coding MGP_BALBcJ_T0092818.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61640084 61956725 + MGP_BALBcJ_P0092818 Megf11 protein_coding protein_coding MGP_BALBcJ_T0092819.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61640141 61899143 + Megf11 protein_coding retained_intron MGP_BALBcJ_T0092820.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61640144 61958640 + MGP_BALBcJ_P0092820 Megf11 protein_coding protein_coding MGP_BALBcJ_T0092821.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61749119 61756857 + Megf11 protein_coding processed_transcript MGP_BALBcJ_T0092822.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61749384 61937188 + Megf11 protein_coding retained_intron MGP_BALBcJ_T0092823.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61794883 61887647 + Megf11 protein_coding processed_transcript MGP_BALBcJ_T0092824.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61909687 61941840 + MGP_BALBcJ_P0092824 Megf11 protein_coding protein_coding MGP_BALBcJ_T0092825.1 MGP_BALBcJ_G0034915.1 mouse_genomes_project 9 61943215 61955368 + Megf11 protein_coding processed_transcript MGP_BALBcJ_T0091470.1 MGP_BALBcJ_G0034435.1 mouse_genomes_project 9 18704186 18710416 - MGP_BALBcJ_P0091470 Tmem205 protein_coding protein_coding MGP_BALBcJ_T0091471.1 MGP_BALBcJ_G0034435.1 mouse_genomes_project 9 18704186 18710416 - MGP_BALBcJ_P0091471 Tmem205 protein_coding protein_coding MGP_BALBcJ_T0093799.1 MGP_BALBcJ_G0035140.1 mouse_genomes_project 9 96723086 96730905 - MGP_BALBcJ_P0093799 Faiml protein_coding protein_coding MGP_BALBcJ_T0093800.1 MGP_BALBcJ_G0035140.1 mouse_genomes_project 9 96723178 96730036 - MGP_BALBcJ_P0093800 Faiml protein_coding protein_coding MGP_BALBcJ_T0091741.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33684069 33712832 + MGP_BALBcJ_P0091741 Fez1 protein_coding protein_coding MGP_BALBcJ_T0091742.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33694773 33743627 + MGP_BALBcJ_P0091742 Fez1 protein_coding protein_coding MGP_BALBcJ_T0091743.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33695713 33724830 + MGP_BALBcJ_P0091743 Fez1 protein_coding protein_coding MGP_BALBcJ_T0091744.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33705882 33743343 + MGP_BALBcJ_P0091744 Fez1 protein_coding protein_coding MGP_BALBcJ_T0091745.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33706001 33732480 + MGP_BALBcJ_P0091745 Fez1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091746.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33733577 33735465 + MGP_BALBcJ_P0091746 Fez1 protein_coding protein_coding MGP_BALBcJ_T0091747.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33734802 33743503 + Fez1 protein_coding retained_intron MGP_BALBcJ_T0091748.1 MGP_BALBcJ_G0034527.1 mouse_genomes_project 9 33735202 33743623 + MGP_BALBcJ_P0091748 Fez1 protein_coding protein_coding MGP_BALBcJ_T0092243.1 MGP_BALBcJ_G0034747.1 mouse_genomes_project 9 46613195 46914125 - MGP_BALBcJ_P0092243 Ncam1 protein_coding protein_coding MGP_BALBcJ_T0092244.1 MGP_BALBcJ_G0034747.1 mouse_genomes_project 9 46613207 46683967 - MGP_BALBcJ_P0092244 Ncam1 protein_coding protein_coding MGP_BALBcJ_T0092245.1 MGP_BALBcJ_G0034747.1 mouse_genomes_project 9 46616096 46914072 - MGP_BALBcJ_P0092245 Ncam1 protein_coding protein_coding MGP_BALBcJ_T0092246.1 MGP_BALBcJ_G0034747.1 mouse_genomes_project 9 46629434 46914090 - MGP_BALBcJ_P0092246 Ncam1 protein_coding protein_coding MGP_BALBcJ_T0092248.1 MGP_BALBcJ_G0034747.1 mouse_genomes_project 9 46635769 46658867 - MGP_BALBcJ_P0092248 Ncam1 protein_coding protein_coding MGP_BALBcJ_T0092249.1 MGP_BALBcJ_G0034747.1 mouse_genomes_project 9 46643373 46913958 - MGP_BALBcJ_P0092249 Ncam1 protein_coding protein_coding MGP_BALBcJ_T0095082.1 MGP_BALBcJ_G0035355.1 mouse_genomes_project 9 111613464 111662689 + MGP_BALBcJ_P0095082 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0005530.1 MGP_BALBcJ_G0004668.1 mouse_genomes_project 9 113138117 113143755 - Gm4665 antisense antisense MGP_BALBcJ_T0011039.1 MGP_BALBcJ_G0009164.1 mouse_genomes_project 9 41436207 41436273 + Mir7085 miRNA miRNA MGP_BALBcJ_T0092959.1 MGP_BALBcJ_G0034956.1 mouse_genomes_project 9 64244397 64254783 + MGP_BALBcJ_P0092959 Rps27l protein_coding protein_coding MGP_BALBcJ_T0092960.1 MGP_BALBcJ_G0034956.1 mouse_genomes_project 9 64244402 64254785 + MGP_BALBcJ_P0092960 Rps27l protein_coding protein_coding MGP_BALBcJ_T0092961.1 MGP_BALBcJ_G0034956.1 mouse_genomes_project 9 64244477 64254739 + MGP_BALBcJ_P0092961 Rps27l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092962.1 MGP_BALBcJ_G0034956.1 mouse_genomes_project 9 64244666 64254787 + Rps27l protein_coding processed_transcript MGP_BALBcJ_T0092963.1 MGP_BALBcJ_G0034956.1 mouse_genomes_project 9 64245953 64254739 + MGP_BALBcJ_P0092963 Rps27l protein_coding protein_coding MGP_BALBcJ_T0092964.1 MGP_BALBcJ_G0034956.1 mouse_genomes_project 9 64253834 64254782 + Rps27l protein_coding retained_intron MGP_BALBcJ_T0093057.1 MGP_BALBcJ_G0034978.1 mouse_genomes_project 9 68148576 68285315 - MGP_BALBcJ_P0093057 Lipc protein_coding protein_coding MGP_BALBcJ_T0093058.1 MGP_BALBcJ_G0034978.1 mouse_genomes_project 9 68148714 68174025 - MGP_BALBcJ_P0093058 Lipc protein_coding unknown_likely_coding MGP_BALBcJ_T0093059.1 MGP_BALBcJ_G0034978.1 mouse_genomes_project 9 68148714 68182111 - MGP_BALBcJ_P0093059 Lipc protein_coding unknown_likely_coding MGP_BALBcJ_T0093060.1 MGP_BALBcJ_G0034978.1 mouse_genomes_project 9 68148714 68204300 - MGP_BALBcJ_P0093060 Lipc protein_coding unknown_likely_coding MGP_BALBcJ_T0091442.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18328400 18371486 + Carm1 protein_coding retained_intron MGP_BALBcJ_T0091443.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18328400 18371506 + MGP_BALBcJ_P0091443 Carm1 protein_coding protein_coding MGP_BALBcJ_T0091444.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18328400 18371486 + MGP_BALBcJ_P0091444 Carm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091445.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18328400 18371486 + MGP_BALBcJ_P0091445 Carm1 protein_coding protein_coding MGP_BALBcJ_T0091446.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18328400 18371486 + MGP_BALBcJ_P0091446 Carm1 protein_coding protein_coding MGP_BALBcJ_T0091447.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18328527 18361485 + Carm1 protein_coding processed_transcript MGP_BALBcJ_T0091448.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18357121 18362357 + Carm1 protein_coding processed_transcript MGP_BALBcJ_T0091449.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18369236 18370219 + Carm1 protein_coding processed_transcript MGP_BALBcJ_T0091450.1 MGP_BALBcJ_G0034425.1 mouse_genomes_project 9 18369421 18370148 + Carm1 protein_coding processed_transcript MGP_BALBcJ_T0005510.1 MGP_BALBcJ_G0004651.1 mouse_genomes_project 9 105008880 105009973 - Gm17118 antisense antisense MGP_BALBcJ_T0093493.1 MGP_BALBcJ_G0035067.1 mouse_genomes_project 9 84005803 84127254 - MGP_BALBcJ_P0093493 Me1 protein_coding protein_coding MGP_BALBcJ_T0093494.1 MGP_BALBcJ_G0035067.1 mouse_genomes_project 9 84005838 84118532 - MGP_BALBcJ_P0093494 Me1 protein_coding protein_coding MGP_BALBcJ_T0093495.1 MGP_BALBcJ_G0035067.1 mouse_genomes_project 9 84007821 84044194 - Me1 protein_coding processed_transcript MGP_BALBcJ_T0093496.1 MGP_BALBcJ_G0035067.1 mouse_genomes_project 9 84039010 84044227 - Me1 protein_coding processed_transcript MGP_BALBcJ_T0092937.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63793171 63871427 - MGP_BALBcJ_P0092937 Usp3 protein_coding protein_coding MGP_BALBcJ_T0092938.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63794788 63871285 - MGP_BALBcJ_P0092938 Usp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092939.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63795781 63871321 - MGP_BALBcJ_P0092939 Usp3 protein_coding protein_coding MGP_BALBcJ_T0092940.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63796431 63871243 - Usp3 protein_coding retained_intron MGP_BALBcJ_T0092941.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63796629 63871291 - MGP_BALBcJ_P0092941 Usp3 protein_coding protein_coding MGP_BALBcJ_T0092942.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63796803 63798894 - Usp3 protein_coding retained_intron MGP_BALBcJ_T0092943.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63796962 63799375 - Usp3 protein_coding retained_intron MGP_BALBcJ_T0092944.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63805172 63808910 - Usp3 protein_coding retained_intron MGP_BALBcJ_T0092945.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63805487 63818663 - Usp3 protein_coding processed_transcript MGP_BALBcJ_T0092946.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63823774 63845182 - Usp3 protein_coding retained_intron MGP_BALBcJ_T0092947.1 MGP_BALBcJ_G0034950.1 mouse_genomes_project 9 63826179 63854363 - Usp3 protein_coding processed_transcript MGP_BALBcJ_T0091115.1 MGP_BALBcJ_G0034294.1 mouse_genomes_project 9 4164200 4177266 + MGP_BALBcJ_P0091115 protein_coding protein_coding MGP_BALBcJ_T0092388.1 MGP_BALBcJ_G0034793.1 mouse_genomes_project 9 51141913 51182041 - MGP_BALBcJ_P0092388 Tnfaip8l3 protein_coding protein_coding MGP_BALBcJ_T0002359.1 MGP_BALBcJ_G0002269.1 mouse_genomes_project 9 69275056 69277051 - TEC TEC MGP_BALBcJ_T0091294.1 MGP_BALBcJ_G0034361.1 mouse_genomes_project 9 16073504 16074446 + MGP_BALBcJ_P0091294 Olfr845 protein_coding protein_coding MGP_BALBcJ_T0099034.1 MGP_BALBcJ_G0037075.1 mouse_genomes_project 9 106196232 106196714 - Gm38163 sense_intronic sense_intronic MGP_BALBcJ_T0092144.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42931236 42975528 - MGP_BALBcJ_P0092144 Rnf214 protein_coding protein_coding MGP_BALBcJ_T0092145.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42931502 42975536 - MGP_BALBcJ_P0092145 Rnf214 protein_coding protein_coding MGP_BALBcJ_T0092146.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42931502 42975066 - MGP_BALBcJ_P0092146 Rnf214 protein_coding protein_coding MGP_BALBcJ_T0092147.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42932101 42975032 - Rnf214 protein_coding retained_intron MGP_BALBcJ_T0092148.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42932110 42975520 - MGP_BALBcJ_P0092148 Rnf214 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092149.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42932645 42975553 - MGP_BALBcJ_P0092149 Rnf214 protein_coding protein_coding MGP_BALBcJ_T0092150.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42937184 42937784 - Rnf214 protein_coding retained_intron MGP_BALBcJ_T0092151.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42939867 42940540 - Rnf214 protein_coding retained_intron MGP_BALBcJ_T0092152.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42958953 42967129 - Rnf214 protein_coding retained_intron MGP_BALBcJ_T0092153.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42959248 42975046 - MGP_BALBcJ_P0092153 Rnf214 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092154.1 MGP_BALBcJ_G0034714.1 mouse_genomes_project 9 42964686 42968583 - Rnf214 protein_coding retained_intron MGP_BALBcJ_T0091533.1 MGP_BALBcJ_G0034464.1 mouse_genomes_project 9 21551258 21604960 - MGP_BALBcJ_P0091533 Tbx20 protein_coding protein_coding MGP_BALBcJ_T0091534.1 MGP_BALBcJ_G0034464.1 mouse_genomes_project 9 21570716 21604960 - MGP_BALBcJ_P0091534 Tbx20 protein_coding protein_coding MGP_BALBcJ_T0091820.1 MGP_BALBcJ_G0034568.1 mouse_genomes_project 9 35366179 35367235 + MGP_BALBcJ_P0091820 Olfr902 protein_coding protein_coding MGP_BALBcJ_T0091900.1 MGP_BALBcJ_G0034636.1 mouse_genomes_project 9 37159688 37182811 + MGP_BALBcJ_P0091900 Zfp202 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091901.1 MGP_BALBcJ_G0034636.1 mouse_genomes_project 9 37176499 37181076 + MGP_BALBcJ_P0091901 Zfp202 protein_coding protein_coding MGP_BALBcJ_T0016124.1 MGP_BALBcJ_G0014221.1 mouse_genomes_project 9 107211174 107212387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093534.1 MGP_BALBcJ_G0035077.1 mouse_genomes_project 9 85780745 85829699 - MGP_BALBcJ_P0093534 Gm20537 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093536.1 MGP_BALBcJ_G0035077.1 mouse_genomes_project 9 85793791 85829584 - MGP_BALBcJ_P0093536 Gm20537 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093764.1 MGP_BALBcJ_G0035124.1 mouse_genomes_project 9 94830393 94851295 - MGP_BALBcJ_P0093764 Trim42 protein_coding protein_coding MGP_BALBcJ_T0016069.1 MGP_BALBcJ_G0014166.1 mouse_genomes_project 9 85414113 85414701 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091567.1 MGP_BALBcJ_G0034477.1 mouse_genomes_project 9 24103805 24136450 + MGP_BALBcJ_P0091567 Igsf9b protein_coding protein_coding MGP_BALBcJ_T0091568.1 MGP_BALBcJ_G0034477.1 mouse_genomes_project 9 24103807 24141078 + MGP_BALBcJ_P0091568 Igsf9b protein_coding protein_coding MGP_BALBcJ_T0091569.1 MGP_BALBcJ_G0034477.1 mouse_genomes_project 9 24104031 24152293 + MGP_BALBcJ_P0091569 Igsf9b protein_coding unknown_likely_coding MGP_BALBcJ_T0093263.1 MGP_BALBcJ_G0035019.1 mouse_genomes_project 9 73358264 73482716 + MGP_BALBcJ_P0093263 Hmgcll1 protein_coding protein_coding MGP_BALBcJ_T0093264.1 MGP_BALBcJ_G0035019.1 mouse_genomes_project 9 73358423 73419101 + Hmgcll1 protein_coding retained_intron MGP_BALBcJ_T0093265.1 MGP_BALBcJ_G0035019.1 mouse_genomes_project 9 73358424 73415800 + Hmgcll1 protein_coding retained_intron MGP_BALBcJ_T0093266.1 MGP_BALBcJ_G0035019.1 mouse_genomes_project 9 73358464 73480441 + MGP_BALBcJ_P0093266 Hmgcll1 protein_coding protein_coding MGP_BALBcJ_T0093267.1 MGP_BALBcJ_G0035019.1 mouse_genomes_project 9 73358484 73482722 + MGP_BALBcJ_P0093267 Hmgcll1 protein_coding protein_coding MGP_BALBcJ_T0095363.1 MGP_BALBcJ_G0035449.1 mouse_genomes_project 9 121232798 121256188 + MGP_BALBcJ_P0095363 Exosc7 protein_coding protein_coding MGP_BALBcJ_T0095364.1 MGP_BALBcJ_G0035449.1 mouse_genomes_project 9 121232841 121239234 + Exosc7 protein_coding retained_intron MGP_BALBcJ_T0095365.1 MGP_BALBcJ_G0035449.1 mouse_genomes_project 9 121246449 121250989 + Exosc7 protein_coding processed_transcript MGP_BALBcJ_T0095404.1 MGP_BALBcJ_G0035463.1 mouse_genomes_project 9 122097194 122103761 - MGP_BALBcJ_P0095404 Ccr1 protein_coding protein_coding MGP_BALBcJ_T0093016.1 MGP_BALBcJ_G0034966.1 mouse_genomes_project 9 67093134 67096355 - MGP_BALBcJ_P0093016 Foxb1 protein_coding protein_coding MGP_BALBcJ_T0091391.1 MGP_BALBcJ_G0034410.1 mouse_genomes_project 9 17878532 17907049 - MGP_BALBcJ_P0091391 Tyk2 protein_coding unknown_likely_coding MGP_BALBcJ_T0091392.1 MGP_BALBcJ_G0034410.1 mouse_genomes_project 9 17878537 17903116 - MGP_BALBcJ_P0091392 Tyk2 protein_coding protein_coding MGP_BALBcJ_T0091081.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1972435 1987824 + MGP_BALBcJ_P0091081 Casp4 protein_coding protein_coding MGP_BALBcJ_T0091082.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1972456 2000737 + MGP_BALBcJ_P0091082 Casp4 protein_coding protein_coding MGP_BALBcJ_T0091083.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1972467 1993345 + Casp4 protein_coding retained_intron MGP_BALBcJ_T0091084.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1972467 1992448 + MGP_BALBcJ_P0091084 Casp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091085.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1972472 1985851 + Casp4 protein_coding retained_intron MGP_BALBcJ_T0091086.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1985509 2000043 + MGP_BALBcJ_P0091086 Casp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091087.1 MGP_BALBcJ_G0034284.1 mouse_genomes_project 9 1987458 1991332 + Casp4 protein_coding retained_intron MGP_BALBcJ_T0091979.1 MGP_BALBcJ_G0034662.1 mouse_genomes_project 9 41127378 41134825 + MGP_BALBcJ_P0091979 Mfrp protein_coding protein_coding MGP_BALBcJ_T0091980.1 MGP_BALBcJ_G0034662.1 mouse_genomes_project 9 41127387 41132169 + MGP_BALBcJ_P0091980 Mfrp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091981.1 MGP_BALBcJ_G0034662.1 mouse_genomes_project 9 41127403 41134822 + MGP_BALBcJ_P0091981 Mfrp protein_coding protein_coding MGP_BALBcJ_T0091982.1 MGP_BALBcJ_G0034662.1 mouse_genomes_project 9 41127419 41134822 + MGP_BALBcJ_P0091982 Mfrp protein_coding protein_coding MGP_BALBcJ_T0091983.1 MGP_BALBcJ_G0034662.1 mouse_genomes_project 9 41127437 41128947 + MGP_BALBcJ_P0091983 Mfrp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091984.1 MGP_BALBcJ_G0034662.1 mouse_genomes_project 9 41130825 41132071 + MGP_BALBcJ_P0091984 Mfrp protein_coding protein_coding MGP_BALBcJ_T0009230.1 MGP_BALBcJ_G0007417.1 mouse_genomes_project 9 57940823 57967965 + 1700036A12Rik lincRNA lincRNA MGP_BALBcJ_T0009231.1 MGP_BALBcJ_G0007417.1 mouse_genomes_project 9 57967290 57967644 + 1700036A12Rik lincRNA lincRNA MGP_BALBcJ_T0091749.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33756362 33953031 - MGP_BALBcJ_P0091749 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091750.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33756362 34019177 - MGP_BALBcJ_P0091750 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091751.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33756365 34019202 - MGP_BALBcJ_P0091751 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091752.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33757858 33835652 - MGP_BALBcJ_P0091752 Pknox2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091753.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33758022 33953001 - Pknox2 protein_coding processed_transcript MGP_BALBcJ_T0091754.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33787946 33953001 - Pknox2 protein_coding retained_intron MGP_BALBcJ_T0091755.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33800454 33953001 - Pknox2 protein_coding retained_intron MGP_BALBcJ_T0091756.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33802226 33953001 - MGP_BALBcJ_P0091756 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091757.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33802239 34009477 - MGP_BALBcJ_P0091757 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091758.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33802255 34019210 - MGP_BALBcJ_P0091758 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091759.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33821073 34017529 - MGP_BALBcJ_P0091759 Pknox2 protein_coding protein_coding MGP_BALBcJ_T0091760.1 MGP_BALBcJ_G0034528.1 mouse_genomes_project 9 33855078 34019154 - Pknox2 protein_coding processed_transcript MGP_BALBcJ_T0099035.1 MGP_BALBcJ_G0037076.1 mouse_genomes_project 9 113158571 113162668 + Gm27002 sense_intronic sense_intronic MGP_BALBcJ_T0002462.1 MGP_BALBcJ_G0002371.1 mouse_genomes_project 9 108128394 108130981 - TEC TEC MGP_BALBcJ_T0095148.1 MGP_BALBcJ_G0035381.1 mouse_genomes_project 9 116546915 116554071 + MGP_BALBcJ_P0095148 Eomes protein_coding protein_coding MGP_BALBcJ_T0095149.1 MGP_BALBcJ_G0035381.1 mouse_genomes_project 9 116547047 116554838 + MGP_BALBcJ_P0095149 Eomes protein_coding protein_coding MGP_BALBcJ_T0095150.1 MGP_BALBcJ_G0035381.1 mouse_genomes_project 9 116547556 116551464 + MGP_BALBcJ_P0095150 Eomes protein_coding protein_coding MGP_BALBcJ_T0091945.1 MGP_BALBcJ_G0034648.1 mouse_genomes_project 9 39321002 39335554 - Tecta protein_coding processed_transcript MGP_BALBcJ_T0091946.1 MGP_BALBcJ_G0034648.1 mouse_genomes_project 9 39321005 39392471 - MGP_BALBcJ_P0091946 Tecta protein_coding protein_coding MGP_BALBcJ_T0091947.1 MGP_BALBcJ_G0034648.1 mouse_genomes_project 9 39321078 39392269 - MGP_BALBcJ_P0091947 Tecta protein_coding protein_coding MGP_BALBcJ_T0101461.1 MGP_BALBcJ_G0039497.1 mouse_genomes_project 9 37785630 37785716 + Snord14d snoRNA snoRNA MGP_BALBcJ_T0091792.1 MGP_BALBcJ_G0034542.1 mouse_genomes_project 9 34542961 34552177 - MGP_BALBcJ_P0091792 Panx3 protein_coding protein_coding MGP_BALBcJ_T0091793.1 MGP_BALBcJ_G0034542.1 mouse_genomes_project 9 34547184 34552128 - MGP_BALBcJ_P0091793 Panx3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009259.1 MGP_BALBcJ_G0007440.1 mouse_genomes_project 9 78829516 78835096 + Gm27226 lincRNA lincRNA MGP_BALBcJ_T0092462.1 MGP_BALBcJ_G0034816.1 mouse_genomes_project 9 52659269 52663168 + MGP_BALBcJ_P0092462 Isl2 protein_coding protein_coding MGP_BALBcJ_T0092463.1 MGP_BALBcJ_G0034816.1 mouse_genomes_project 9 52661745 52666778 + MGP_BALBcJ_P0092463 Isl2 protein_coding protein_coding MGP_BALBcJ_T0092464.1 MGP_BALBcJ_G0034816.1 mouse_genomes_project 9 52661804 52666778 + MGP_BALBcJ_P0092464 Isl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092465.1 MGP_BALBcJ_G0034816.1 mouse_genomes_project 9 52661804 52666776 + MGP_BALBcJ_P0092465 Isl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092466.1 MGP_BALBcJ_G0034816.1 mouse_genomes_project 9 52662933 52664878 + Isl2 protein_coding retained_intron MGP_BALBcJ_T0101456.1 MGP_BALBcJ_G0039492.1 mouse_genomes_project 9 32011005 32011149 + Gm24262 snoRNA snoRNA MGP_BALBcJ_T0091712.1 MGP_BALBcJ_G0034522.1 mouse_genomes_project 9 33503924 33506773 - MGP_BALBcJ_P0091712 A630095E13Rik protein_coding protein_coding MGP_BALBcJ_T0091713.1 MGP_BALBcJ_G0034522.1 mouse_genomes_project 9 33503924 33506773 - MGP_BALBcJ_P0091713 A630095E13Rik protein_coding protein_coding MGP_BALBcJ_T0091714.1 MGP_BALBcJ_G0034522.1 mouse_genomes_project 9 33503926 33512778 - A630095E13Rik protein_coding retained_intron MGP_BALBcJ_T0005483.1 MGP_BALBcJ_G0004630.1 mouse_genomes_project 9 94175836 94181458 + A930006L05Rik antisense antisense MGP_BALBcJ_T0091168.1 MGP_BALBcJ_G0034314.1 mouse_genomes_project 9 10067315 10068703 + MGP_BALBcJ_P0091168 Phxr4 protein_coding protein_coding MGP_BALBcJ_T0091093.1 MGP_BALBcJ_G0034286.1 mouse_genomes_project 9 2834204 3068599 + MGP_BALBcJ_P0091093 Pdgfd protein_coding protein_coding MGP_BALBcJ_T0091094.1 MGP_BALBcJ_G0034286.1 mouse_genomes_project 9 2834253 3069923 + MGP_BALBcJ_P0091094 Pdgfd protein_coding protein_coding MGP_BALBcJ_T0101460.1 MGP_BALBcJ_G0039496.1 mouse_genomes_project 9 37784687 37784773 + Snord14c snoRNA snoRNA MGP_BALBcJ_T0092264.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47732409 47739320 + MGP_BALBcJ_P0092264 Pih1d2 protein_coding protein_coding MGP_BALBcJ_T0092265.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47732421 47737618 + Pih1d2 protein_coding retained_intron MGP_BALBcJ_T0092266.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47732425 47736867 + MGP_BALBcJ_P0092266 Pih1d2 protein_coding protein_coding MGP_BALBcJ_T0092267.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47732471 47739323 + MGP_BALBcJ_P0092267 Pih1d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092268.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47732609 47733906 + Pih1d2 protein_coding retained_intron MGP_BALBcJ_T0092269.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47732638 47736279 + MGP_BALBcJ_P0092269 Pih1d2 protein_coding protein_coding MGP_BALBcJ_T0092270.1 MGP_BALBcJ_G0034757.1 mouse_genomes_project 9 47733095 47736154 + MGP_BALBcJ_P0092270 Pih1d2 protein_coding protein_coding MGP_BALBcJ_T0101440.1 MGP_BALBcJ_G0039476.1 mouse_genomes_project 9 12001412 12001483 + Gm24299 snoRNA snoRNA MGP_BALBcJ_T0011037.1 MGP_BALBcJ_G0009162.1 mouse_genomes_project 9 39858656 39858735 - Gm27509 miRNA miRNA MGP_BALBcJ_T0092334.1 MGP_BALBcJ_G0034768.1 mouse_genomes_project 9 48195932 48217111 - MGP_BALBcJ_P0092334 Layn protein_coding protein_coding MGP_BALBcJ_T0092335.1 MGP_BALBcJ_G0034768.1 mouse_genomes_project 9 48196448 48216960 - MGP_BALBcJ_P0092335 Layn protein_coding unknown_likely_coding MGP_BALBcJ_T0094766.1 MGP_BALBcJ_G0035297.1 mouse_genomes_project 9 106632955 106647348 - MGP_BALBcJ_P0094766 Atrip protein_coding protein_coding MGP_BALBcJ_T0094767.1 MGP_BALBcJ_G0035297.1 mouse_genomes_project 9 106632993 106647276 - MGP_BALBcJ_P0094767 Atrip protein_coding protein_coding MGP_BALBcJ_T0094768.1 MGP_BALBcJ_G0035297.1 mouse_genomes_project 9 106633018 106635498 - Atrip protein_coding retained_intron MGP_BALBcJ_T0094769.1 MGP_BALBcJ_G0035297.1 mouse_genomes_project 9 106633869 106638602 - MGP_BALBcJ_P0094769 Atrip protein_coding protein_coding MGP_BALBcJ_T0094770.1 MGP_BALBcJ_G0035297.1 mouse_genomes_project 9 106640684 106642738 - Atrip protein_coding retained_intron MGP_BALBcJ_T0094771.1 MGP_BALBcJ_G0035297.1 mouse_genomes_project 9 106644962 106647290 - Atrip protein_coding retained_intron MGP_BALBcJ_T0092252.1 MGP_BALBcJ_G0034750.1 mouse_genomes_project 9 47631583 47638607 - MGP_BALBcJ_P0092252 Pts protein_coding protein_coding MGP_BALBcJ_T0011045.1 MGP_BALBcJ_G0009170.1 mouse_genomes_project 9 49245260 49245351 - Gm27686 miRNA miRNA MGP_BALBcJ_T0005482.1 MGP_BALBcJ_G0004629.1 mouse_genomes_project 9 93497519 93511073 - Gm28085 antisense antisense MGP_BALBcJ_T0011047.1 MGP_BALBcJ_G0009172.1 mouse_genomes_project 9 50520722 50520804 - Mir130c miRNA miRNA MGP_BALBcJ_T0092417.1 MGP_BALBcJ_G0034804.1 mouse_genomes_project 9 51986722 52035937 + MGP_BALBcJ_P0092417 Ireb2 protein_coding protein_coding MGP_BALBcJ_T0095314.1 MGP_BALBcJ_G0035433.1 mouse_genomes_project 9 120072252 120100537 + MGP_BALBcJ_P0095314 Fam198a protein_coding protein_coding MGP_BALBcJ_T0092578.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55243690 55322368 + Stra6 protein_coding retained_intron MGP_BALBcJ_T0092581.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55259215 55321559 + MGP_BALBcJ_P0092581 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092582.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55259290 55319772 + MGP_BALBcJ_P0092582 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092585.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55309424 55334775 + MGP_BALBcJ_P0092585 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092586.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55309685 55334773 + MGP_BALBcJ_P0092586 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092587.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55309837 55321208 + MGP_BALBcJ_P0092587 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092588.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55312233 55320781 + MGP_BALBcJ_P0092588 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092589.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55314353 55321533 + MGP_BALBcJ_P0092589 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092590.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55314411 55321449 + MGP_BALBcJ_P0092590 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092591.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55314411 55334816 + MGP_BALBcJ_P0092591 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092592.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55314871 55321455 + MGP_BALBcJ_P0092592 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092593.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55315001 55321465 + MGP_BALBcJ_P0092593 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092594.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55315001 55334816 + MGP_BALBcJ_P0092594 Stra6 protein_coding protein_coding MGP_BALBcJ_T0092595.1 MGP_BALBcJ_G0034857.1 mouse_genomes_project 9 55315146 55319703 + MGP_BALBcJ_P0092595 Stra6 protein_coding protein_coding MGP_BALBcJ_T0094929.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108434237 108463617 - MGP_BALBcJ_P0094929 Nbeal2 protein_coding protein_coding MGP_BALBcJ_T0094930.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108434237 108463617 - MGP_BALBcJ_P0094930 Nbeal2 protein_coding protein_coding MGP_BALBcJ_T0094931.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108434320 108463598 - MGP_BALBcJ_P0094931 Nbeal2 protein_coding protein_coding MGP_BALBcJ_T0094932.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108434491 108448072 - MGP_BALBcJ_P0094932 Nbeal2 protein_coding protein_coding MGP_BALBcJ_T0094933.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108434491 108441500 - MGP_BALBcJ_P0094933 Nbeal2 protein_coding protein_coding MGP_BALBcJ_T0094934.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108437684 108438327 - Nbeal2 protein_coding retained_intron MGP_BALBcJ_T0094935.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108438356 108439117 - Nbeal2 protein_coding retained_intron MGP_BALBcJ_T0094936.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108439018 108443898 - MGP_BALBcJ_P0094936 Nbeal2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094937.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108440514 108441329 - Nbeal2 protein_coding retained_intron MGP_BALBcJ_T0094938.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108444074 108444542 - Nbeal2 protein_coding retained_intron MGP_BALBcJ_T0094939.1 MGP_BALBcJ_G0035328.1 mouse_genomes_project 9 108447772 108454826 - MGP_BALBcJ_P0094939 Nbeal2 protein_coding protein_coding MGP_BALBcJ_T0095122.1 MGP_BALBcJ_G0035376.1 mouse_genomes_project 9 114063994 114154443 - MGP_BALBcJ_P0095122 Tgfbr2 protein_coding protein_coding MGP_BALBcJ_T0095123.1 MGP_BALBcJ_G0035376.1 mouse_genomes_project 9 114063994 114154443 - MGP_BALBcJ_P0095123 Tgfbr2 protein_coding protein_coding MGP_BALBcJ_T0011051.1 MGP_BALBcJ_G0009176.1 mouse_genomes_project 9 59458831 59458936 - Gm25603 miRNA miRNA MGP_BALBcJ_T0092400.1 MGP_BALBcJ_G0034797.1 mouse_genomes_project 9 51650405 51656441 + MGP_BALBcJ_P0092400 Sh2d7 protein_coding protein_coding MGP_BALBcJ_T0092401.1 MGP_BALBcJ_G0034797.1 mouse_genomes_project 9 51650409 51655075 + MGP_BALBcJ_P0092401 Sh2d7 protein_coding protein_coding MGP_BALBcJ_T0091077.1 MGP_BALBcJ_G0034282.1 mouse_genomes_project 9 1080950 1467730 - MGP_BALBcJ_P0091077 Gria4 protein_coding protein_coding MGP_BALBcJ_T0091078.1 MGP_BALBcJ_G0034282.1 mouse_genomes_project 9 1080950 1467730 - MGP_BALBcJ_P0091078 Gria4 protein_coding protein_coding MGP_BALBcJ_T0091079.1 MGP_BALBcJ_G0034282.1 mouse_genomes_project 9 1147209 1467730 - MGP_BALBcJ_P0091079 Gria4 protein_coding protein_coding MGP_BALBcJ_T0091825.1 MGP_BALBcJ_G0034573.1 mouse_genomes_project 9 35443182 35444306 + MGP_BALBcJ_P0091825 Olfr911-ps1 protein_coding protein_coding MGP_BALBcJ_T0093975.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101564479 101602169 + Nphp3 protein_coding retained_intron MGP_BALBcJ_T0093976.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101564481 101606543 + MGP_BALBcJ_P0093976 Nphp3 protein_coding protein_coding MGP_BALBcJ_T0093977.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101564589 101605834 + MGP_BALBcJ_P0093977 Nphp3 protein_coding protein_coding MGP_BALBcJ_T0093978.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101564589 101720161 + MGP_BALBcJ_P0093978 Nphp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093979.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101564693 101578737 + Nphp3 protein_coding retained_intron MGP_BALBcJ_T0093980.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101564702 101605048 + MGP_BALBcJ_P0093980 Nphp3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093981.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101594300 101596855 + Nphp3 protein_coding retained_intron MGP_BALBcJ_T0093982.1 MGP_BALBcJ_G0035175.1 mouse_genomes_project 9 101598280 101600974 + MGP_BALBcJ_P0093982 Nphp3 protein_coding protein_coding MGP_BALBcJ_T0094112.1 MGP_BALBcJ_G0035199.1 mouse_genomes_project 9 103860610 103929768 + MGP_BALBcJ_P0094112 Poc1a protein_coding protein_coding MGP_BALBcJ_T0094113.1 MGP_BALBcJ_G0035199.1 mouse_genomes_project 9 103860929 103929781 + MGP_BALBcJ_P0094113 Poc1a protein_coding protein_coding MGP_BALBcJ_T0094114.1 MGP_BALBcJ_G0035199.1 mouse_genomes_project 9 103870400 103930502 + Poc1a protein_coding processed_transcript MGP_BALBcJ_T0094115.1 MGP_BALBcJ_G0035199.1 mouse_genomes_project 9 103880293 103929766 + Poc1a protein_coding processed_transcript MGP_BALBcJ_T0094116.1 MGP_BALBcJ_G0035199.1 mouse_genomes_project 9 103907758 103929767 + Poc1a protein_coding processed_transcript MGP_BALBcJ_T0005472.1 MGP_BALBcJ_G0004626.1 mouse_genomes_project 9 93323640 93325740 - 1700065D16Rik antisense antisense MGP_BALBcJ_T0005473.1 MGP_BALBcJ_G0004626.1 mouse_genomes_project 9 93323642 93326094 - 1700065D16Rik antisense antisense MGP_BALBcJ_T0005474.1 MGP_BALBcJ_G0004626.1 mouse_genomes_project 9 93323642 93326545 - 1700065D16Rik antisense antisense MGP_BALBcJ_T0005475.1 MGP_BALBcJ_G0004626.1 mouse_genomes_project 9 93323643 93326094 - 1700065D16Rik antisense antisense MGP_BALBcJ_T0005476.1 MGP_BALBcJ_G0004626.1 mouse_genomes_project 9 93323774 93326543 - 1700065D16Rik antisense antisense MGP_BALBcJ_T0092277.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47772136 47810471 - MGP_BALBcJ_P0092277 Dixdc1 protein_coding unknown_likely_coding MGP_BALBcJ_T0092278.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47772139 47839916 - MGP_BALBcJ_P0092278 Dixdc1 protein_coding protein_coding MGP_BALBcJ_T0092279.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47772143 47811252 - Dixdc1 protein_coding retained_intron MGP_BALBcJ_T0092280.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47772143 47840008 - MGP_BALBcJ_P0092280 Dixdc1 protein_coding protein_coding MGP_BALBcJ_T0092281.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47775582 47808649 - Dixdc1 protein_coding processed_transcript MGP_BALBcJ_T0092282.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47775582 47851494 - MGP_BALBcJ_P0092282 Dixdc1 protein_coding protein_coding MGP_BALBcJ_T0092283.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47775646 47795942 - Dixdc1 protein_coding retained_intron MGP_BALBcJ_T0092284.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47788068 47805682 - MGP_BALBcJ_P0092284 Dixdc1 protein_coding protein_coding MGP_BALBcJ_T0092285.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47801462 47811327 - Dixdc1 protein_coding processed_transcript MGP_BALBcJ_T0092286.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47805350 47810526 - Dixdc1 protein_coding retained_intron MGP_BALBcJ_T0092287.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47805528 47809662 - Dixdc1 protein_coding processed_transcript MGP_BALBcJ_T0092288.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47821551 47851424 - MGP_BALBcJ_P0092288 Dixdc1 protein_coding protein_coding MGP_BALBcJ_T0092289.1 MGP_BALBcJ_G0034759.1 mouse_genomes_project 9 47822054 47839879 - MGP_BALBcJ_P0092289 Dixdc1 protein_coding protein_coding MGP_BALBcJ_T0093071.1 MGP_BALBcJ_G0034980.1 mouse_genomes_project 9 68549017 68630977 + MGP_BALBcJ_P0093071 Aldh1a2 protein_coding protein_coding MGP_BALBcJ_T0091387.1 MGP_BALBcJ_G0034406.1 mouse_genomes_project 9 17805261 17812577 + MGP_BALBcJ_P0091387 Icam5 protein_coding protein_coding MGP_BALBcJ_T0002427.1 MGP_BALBcJ_G0002336.1 mouse_genomes_project 9 98651801 98657270 + TEC TEC MGP_BALBcJ_T0095403.1 MGP_BALBcJ_G0035462.1 mouse_genomes_project 9 121988391 121997611 - MGP_BALBcJ_P0095403 Xcr1 protein_coding protein_coding MGP_BALBcJ_T0101497.1 MGP_BALBcJ_G0039533.1 mouse_genomes_project 9 98923531 98923663 - Gm24638 snoRNA snoRNA MGP_BALBcJ_T0101444.1 MGP_BALBcJ_G0039480.1 mouse_genomes_project 9 12003520 12003653 + snoRNA snoRNA MGP_BALBcJ_T0101481.1 MGP_BALBcJ_G0039517.1 mouse_genomes_project 9 71145372 71145502 - Gm25105 snoRNA snoRNA MGP_BALBcJ_T0005491.1 MGP_BALBcJ_G0004636.1 mouse_genomes_project 9 96787295 96792966 - 4930422M22Rik antisense antisense MGP_BALBcJ_T0092704.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58577060 58623196 + MGP_BALBcJ_P0092704 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092705.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58577077 58622604 + MGP_BALBcJ_P0092705 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092706.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58577552 58623186 + MGP_BALBcJ_P0092706 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092707.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58577913 58623185 + MGP_BALBcJ_P0092707 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092708.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578075 58614064 + MGP_BALBcJ_P0092708 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092709.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578079 58622536 + MGP_BALBcJ_P0092709 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092710.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578110 58612138 + MGP_BALBcJ_P0092710 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092711.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578132 58621415 + MGP_BALBcJ_P0092711 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092712.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578132 58621415 + MGP_BALBcJ_P0092712 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092713.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578176 58606592 + MGP_BALBcJ_P0092713 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092714.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58578208 58621675 + MGP_BALBcJ_P0092714 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092715.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58579023 58599337 + MGP_BALBcJ_P0092715 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092716.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58580225 58621675 + MGP_BALBcJ_P0092716 Tle3 protein_coding protein_coding MGP_BALBcJ_T0092717.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58606558 58614833 + Tle3 protein_coding processed_transcript MGP_BALBcJ_T0092718.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58607160 58622534 + Tle3 protein_coding retained_intron MGP_BALBcJ_T0092719.1 MGP_BALBcJ_G0034887.1 mouse_genomes_project 9 58614635 58623118 + Tle3 protein_coding processed_transcript MGP_BALBcJ_T0005527.1 MGP_BALBcJ_G0004665.1 mouse_genomes_project 9 108805543 108806810 + 1700061E17Rik antisense antisense MGP_BALBcJ_T0011714.1 MGP_BALBcJ_G0009839.1 mouse_genomes_project 9 17575743 17576064 + Gm26274 misc_RNA misc_RNA MGP_BALBcJ_T0016095.1 MGP_BALBcJ_G0014192.1 mouse_genomes_project 9 94057026 94057231 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100168.1 MGP_BALBcJ_G0038204.1 mouse_genomes_project 9 15405443 15405545 + Gm24546 snRNA snRNA MGP_BALBcJ_T0092247.1 MGP_BALBcJ_G0034748.1 mouse_genomes_project 9 46630480 46678379 + MGP_BALBcJ_P0092247 Gm11149 protein_coding protein_coding MGP_BALBcJ_T0009286.1 MGP_BALBcJ_G0007458.1 mouse_genomes_project 9 93987735 93994545 - lincRNA lincRNA MGP_BALBcJ_T0005455.1 MGP_BALBcJ_G0004613.1 mouse_genomes_project 9 73244722 73358602 - Gm26903 antisense antisense MGP_BALBcJ_T0092779.1 MGP_BALBcJ_G0034906.1 mouse_genomes_project 9 61190170 61260222 - MGP_BALBcJ_P0092779 Smad6 protein_coding protein_coding MGP_BALBcJ_T0092780.1 MGP_BALBcJ_G0034906.1 mouse_genomes_project 9 61191103 61255150 - Smad6 protein_coding processed_transcript MGP_BALBcJ_T0092781.1 MGP_BALBcJ_G0034906.1 mouse_genomes_project 9 61259780 61260317 - MGP_BALBcJ_P0092781 Smad6 protein_coding protein_coding MGP_BALBcJ_T0092026.1 MGP_BALBcJ_G0034675.1 mouse_genomes_project 9 41378451 41386127 - MGP_BALBcJ_P0092026 Hmbs protein_coding protein_coding MGP_BALBcJ_T0098667.1 MGP_BALBcJ_G0036721.1 mouse_genomes_project 9 9507145 9507266 + Gm25365 rRNA rRNA MGP_BALBcJ_T0016099.1 MGP_BALBcJ_G0014196.1 mouse_genomes_project 9 94725616 94725902 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009327.1 MGP_BALBcJ_G0007490.1 mouse_genomes_project 9 117003645 117004545 + Gm16295 lincRNA lincRNA MGP_BALBcJ_T0009330.1 MGP_BALBcJ_G0007493.1 mouse_genomes_project 9 119046648 119048129 - 1700020M21Rik lincRNA lincRNA MGP_BALBcJ_T0011717.1 MGP_BALBcJ_G0009842.1 mouse_genomes_project 9 41405405 41405682 + Gm22141 misc_RNA misc_RNA MGP_BALBcJ_T0092914.1 MGP_BALBcJ_G0034944.1 mouse_genomes_project 9 63327363 63331919 - MGP_BALBcJ_P0092914 Snx22 protein_coding protein_coding MGP_BALBcJ_T0009267.1 MGP_BALBcJ_G0007446.1 mouse_genomes_project 9 87240440 87243634 + 1700017I07Rik lincRNA lincRNA MGP_BALBcJ_T0101774.1 MGP_BALBcJ_G0039724.1 mouse_genomes_project 9 55383800 55389708 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101775.1 MGP_BALBcJ_G0039724.1 mouse_genomes_project 9 55388937 55389454 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101471.1 MGP_BALBcJ_G0039507.1 mouse_genomes_project 9 61415816 61415915 + Snord16a snoRNA snoRNA MGP_BALBcJ_T0101446.1 MGP_BALBcJ_G0039482.1 mouse_genomes_project 9 12013809 12013879 - Scarna9 snoRNA snoRNA MGP_BALBcJ_T0092455.1 MGP_BALBcJ_G0034814.1 mouse_genomes_project 9 52441645 52555102 + MGP_BALBcJ_P0092455 Tmem266 protein_coding protein_coding MGP_BALBcJ_T0092456.1 MGP_BALBcJ_G0034814.1 mouse_genomes_project 9 52441671 52555102 + MGP_BALBcJ_P0092456 Tmem266 protein_coding protein_coding MGP_BALBcJ_T0092457.1 MGP_BALBcJ_G0034814.1 mouse_genomes_project 9 52447923 52554115 + Tmem266 protein_coding processed_transcript MGP_BALBcJ_T0009225.1 MGP_BALBcJ_G0007412.1 mouse_genomes_project 9 54701271 54707634 - Gm26631 lincRNA lincRNA MGP_BALBcJ_T0091767.1 MGP_BALBcJ_G0034533.1 mouse_genomes_project 9 34286109 34298224 + Robo4 protein_coding retained_intron MGP_BALBcJ_T0091768.1 MGP_BALBcJ_G0034533.1 mouse_genomes_project 9 34286109 34298228 + MGP_BALBcJ_P0091768 Robo4 protein_coding protein_coding MGP_BALBcJ_T0091769.1 MGP_BALBcJ_G0034533.1 mouse_genomes_project 9 34286245 34298226 + MGP_BALBcJ_P0091769 Robo4 protein_coding protein_coding MGP_BALBcJ_T0091770.1 MGP_BALBcJ_G0034533.1 mouse_genomes_project 9 34286258 34298227 + MGP_BALBcJ_P0091770 Robo4 protein_coding protein_coding MGP_BALBcJ_T0091654.1 MGP_BALBcJ_G0034500.1 mouse_genomes_project 9 32067659 32080773 + Srpr protein_coding processed_transcript MGP_BALBcJ_T0091667.1 MGP_BALBcJ_G0034500.1 mouse_genomes_project 9 32078387 32084480 + MGP_BALBcJ_P0091667 Srpr protein_coding protein_coding MGP_BALBcJ_T0091668.1 MGP_BALBcJ_G0034500.1 mouse_genomes_project 9 32079130 32080088 + Srpr protein_coding retained_intron MGP_BALBcJ_T0091669.1 MGP_BALBcJ_G0034500.1 mouse_genomes_project 9 32082135 32113005 + MGP_BALBcJ_P0091669 Srpr protein_coding protein_coding MGP_BALBcJ_T0016002.1 MGP_BALBcJ_G0014099.1 mouse_genomes_project 9 32146384 32146663 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092353.1 MGP_BALBcJ_G0034778.1 mouse_genomes_project 9 49253550 49309390 - MGP_BALBcJ_P0092353 Zc3h12c protein_coding protein_coding MGP_BALBcJ_T0092354.1 MGP_BALBcJ_G0034778.1 mouse_genomes_project 9 49256968 49309804 - MGP_BALBcJ_P0092354 Zc3h12c protein_coding unknown_likely_coding MGP_BALBcJ_T0005529.1 MGP_BALBcJ_G0004667.1 mouse_genomes_project 9 112752993 112755148 + Gm9888 antisense antisense MGP_BALBcJ_T0002378.1 MGP_BALBcJ_G0002288.1 mouse_genomes_project 9 70485614 70487847 + TEC TEC MGP_BALBcJ_T0098676.1 MGP_BALBcJ_G0036730.1 mouse_genomes_project 9 84617566 84617700 + Gm24649 rRNA rRNA MGP_BALBcJ_T0101438.1 MGP_BALBcJ_G0039474.1 mouse_genomes_project 9 11999890 12000013 + Gm25500 snoRNA snoRNA MGP_BALBcJ_T0101479.1 MGP_BALBcJ_G0039515.1 mouse_genomes_project 9 67493567 67493698 - Gm24257 snoRNA snoRNA MGP_BALBcJ_T0002381.1 MGP_BALBcJ_G0002291.1 mouse_genomes_project 9 73010877 73011565 + TEC TEC MGP_BALBcJ_T0011068.1 MGP_BALBcJ_G0009193.1 mouse_genomes_project 9 101991790 101991865 + Mir2136 miRNA miRNA MGP_BALBcJ_T0092505.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289758 54293513 + MGP_BALBcJ_P0092505 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092506.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289758 54302084 + MGP_BALBcJ_P0092506 Man2c1 protein_coding protein_coding MGP_BALBcJ_T0092507.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289836 54296154 + MGP_BALBcJ_P0092507 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092508.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289836 54300072 + MGP_BALBcJ_P0092508 Man2c1 protein_coding protein_coding MGP_BALBcJ_T0092509.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289838 54294489 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092510.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289838 54301565 + MGP_BALBcJ_P0092510 Man2c1 protein_coding protein_coding MGP_BALBcJ_T0092511.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289845 54290322 + Man2c1 protein_coding processed_transcript MGP_BALBcJ_T0092512.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289854 54297161 + MGP_BALBcJ_P0092512 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092513.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289854 54301566 + MGP_BALBcJ_P0092513 Man2c1 protein_coding protein_coding MGP_BALBcJ_T0092514.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54289854 54298756 + MGP_BALBcJ_P0092514 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092515.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54290442 54294463 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092516.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54294300 54296888 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092517.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54294949 54296361 + MGP_BALBcJ_P0092517 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092518.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54296102 54297195 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092519.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54297400 54300090 + MGP_BALBcJ_P0092519 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092520.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54297783 54299773 + MGP_BALBcJ_P0092520 Man2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092521.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54298225 54299355 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092522.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54298857 54301575 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092523.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54298857 54300074 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092524.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54299238 54300541 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092525.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54299639 54301569 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092526.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54300044 54301575 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0092527.1 MGP_BALBcJ_G0034832.1 mouse_genomes_project 9 54300739 54301569 + Man2c1 protein_coding retained_intron MGP_BALBcJ_T0093155.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70011887 70102288 + MGP_BALBcJ_P0093155 Nedd4 protein_coding protein_coding MGP_BALBcJ_T0093156.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70011979 70022049 + Nedd4 protein_coding retained_intron MGP_BALBcJ_T0093157.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70012023 70072293 + MGP_BALBcJ_P0093157 Nedd4 protein_coding protein_coding MGP_BALBcJ_T0093158.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70012028 70063413 + MGP_BALBcJ_P0093158 Nedd4 protein_coding protein_coding MGP_BALBcJ_T0093159.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70012031 70012842 + Nedd4 protein_coding processed_transcript MGP_BALBcJ_T0093160.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70018403 70022030 + Nedd4 protein_coding retained_intron MGP_BALBcJ_T0093161.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70018414 70071858 + MGP_BALBcJ_P0093161 Nedd4 protein_coding protein_coding MGP_BALBcJ_T0093162.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70091788 70100595 + MGP_BALBcJ_P0093162 Nedd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093163.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70093927 70099590 + Nedd4 protein_coding retained_intron MGP_BALBcJ_T0093164.1 MGP_BALBcJ_G0034990.1 mouse_genomes_project 9 70098284 70099700 + Nedd4 protein_coding retained_intron MGP_BALBcJ_T0101472.1 MGP_BALBcJ_G0039508.1 mouse_genomes_project 9 61416266 61416336 + Gm22571 snoRNA snoRNA MGP_BALBcJ_T0009201.1 MGP_BALBcJ_G0007393.1 mouse_genomes_project 9 31465355 31466134 - Gm26662 lincRNA lincRNA MGP_BALBcJ_T0018499.1 MGP_BALBcJ_G0015679.1 mouse_genomes_project 9 61276500 61279500 - 1700055C04Rik processed_transcript processed_transcript MGP_BALBcJ_T0016088.1 MGP_BALBcJ_G0014185.1 mouse_genomes_project 9 91875033 91875379 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094104.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103811579 103826301 - MGP_BALBcJ_P0094104 Alas1 protein_coding protein_coding MGP_BALBcJ_T0094105.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103811582 103826697 - MGP_BALBcJ_P0094105 Alas1 protein_coding protein_coding MGP_BALBcJ_T0094106.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103812067 103826427 - MGP_BALBcJ_P0094106 Alas1 protein_coding protein_coding MGP_BALBcJ_T0094107.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103812082 103821744 - Alas1 protein_coding processed_transcript MGP_BALBcJ_T0094108.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103812335 103816859 - MGP_BALBcJ_P0094108 Alas1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094109.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103813529 103815212 - Alas1 protein_coding retained_intron MGP_BALBcJ_T0094110.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103814805 103818160 - Alas1 protein_coding retained_intron MGP_BALBcJ_T0094111.1 MGP_BALBcJ_G0035198.1 mouse_genomes_project 9 103816944 103826423 - MGP_BALBcJ_P0094111 Alas1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091389.1 MGP_BALBcJ_G0034408.1 mouse_genomes_project 9 17841093 17847088 - MGP_BALBcJ_P0091389 Fdx1l protein_coding protein_coding MGP_BALBcJ_T0094959.1 MGP_BALBcJ_G0035333.1 mouse_genomes_project 9 108625962 108634092 + MGP_BALBcJ_P0094959 Prss44 protein_coding protein_coding MGP_BALBcJ_T0094960.1 MGP_BALBcJ_G0035333.1 mouse_genomes_project 9 108625995 108640589 + MGP_BALBcJ_P0094960 Prss44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094961.1 MGP_BALBcJ_G0035333.1 mouse_genomes_project 9 108630542 108632621 + MGP_BALBcJ_P0094961 Prss44 protein_coding protein_coding MGP_BALBcJ_T0094962.1 MGP_BALBcJ_G0035333.1 mouse_genomes_project 9 108631308 108633041 + Prss44 protein_coding retained_intron MGP_BALBcJ_T0002380.1 MGP_BALBcJ_G0002290.1 mouse_genomes_project 9 71200241 71204673 - TEC TEC MGP_BALBcJ_T0002458.1 MGP_BALBcJ_G0002367.1 mouse_genomes_project 9 106523967 106524506 - TEC TEC MGP_BALBcJ_T0091797.1 MGP_BALBcJ_G0034546.1 mouse_genomes_project 9 34757322 34758258 + MGP_BALBcJ_P0091797 Olfr877 protein_coding protein_coding MGP_BALBcJ_T0092782.1 MGP_BALBcJ_G0034907.1 mouse_genomes_project 9 61357171 61378666 + MGP_BALBcJ_P0092782 Lctl protein_coding protein_coding MGP_BALBcJ_T0092783.1 MGP_BALBcJ_G0034907.1 mouse_genomes_project 9 61357196 61358160 + Lctl protein_coding retained_intron MGP_BALBcJ_T0092784.1 MGP_BALBcJ_G0034907.1 mouse_genomes_project 9 61357253 61358036 + Lctl protein_coding processed_transcript MGP_BALBcJ_T0092785.1 MGP_BALBcJ_G0034907.1 mouse_genomes_project 9 61357283 61378662 + MGP_BALBcJ_P0092785 Lctl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092786.1 MGP_BALBcJ_G0034907.1 mouse_genomes_project 9 61361617 61378653 + MGP_BALBcJ_P0092786 Lctl protein_coding protein_coding MGP_BALBcJ_T0092787.1 MGP_BALBcJ_G0034907.1 mouse_genomes_project 9 61362045 61366799 + Lctl protein_coding retained_intron MGP_BALBcJ_T0100167.1 MGP_BALBcJ_G0038203.1 mouse_genomes_project 9 11898209 11898364 - Gm22658 snRNA snRNA MGP_BALBcJ_T0094966.1 MGP_BALBcJ_G0035336.1 mouse_genomes_project 9 108668146 108681525 + MGP_BALBcJ_P0094966 Prss46 protein_coding protein_coding MGP_BALBcJ_T0094967.1 MGP_BALBcJ_G0035336.1 mouse_genomes_project 9 108674693 108681519 + MGP_BALBcJ_P0094967 Prss46 protein_coding protein_coding MGP_BALBcJ_T0005442.1 MGP_BALBcJ_G0004604.1 mouse_genomes_project 9 64091318 64095500 - BC050972 antisense antisense MGP_BALBcJ_T0005443.1 MGP_BALBcJ_G0004604.1 mouse_genomes_project 9 64091551 64095200 - BC050972 antisense antisense MGP_BALBcJ_T0005444.1 MGP_BALBcJ_G0004604.1 mouse_genomes_project 9 64091580 64097000 - BC050972 antisense antisense MGP_BALBcJ_T0092036.1 MGP_BALBcJ_G0034678.1 mouse_genomes_project 9 41432745 41438755 + MGP_BALBcJ_P0092036 Slc37a4 protein_coding unknown_likely_coding MGP_BALBcJ_T0092037.1 MGP_BALBcJ_G0034678.1 mouse_genomes_project 9 41433959 41438748 + MGP_BALBcJ_P0092037 Slc37a4 protein_coding protein_coding MGP_BALBcJ_T0011042.1 MGP_BALBcJ_G0009167.1 mouse_genomes_project 9 45608990 45609073 - Gm23653 miRNA miRNA MGP_BALBcJ_T0100191.1 MGP_BALBcJ_G0038227.1 mouse_genomes_project 9 60675347 60675489 + Gm25995 snRNA snRNA MGP_BALBcJ_T0092856.1 MGP_BALBcJ_G0034930.1 mouse_genomes_project 9 62658636 62675243 + MGP_BALBcJ_P0092856 Rasl12 protein_coding protein_coding MGP_BALBcJ_T0092857.1 MGP_BALBcJ_G0034930.1 mouse_genomes_project 9 62658636 62673098 + MGP_BALBcJ_P0092857 Rasl12 protein_coding protein_coding MGP_BALBcJ_T0002360.1 MGP_BALBcJ_G0002270.1 mouse_genomes_project 9 69317427 69319720 - TEC TEC MGP_BALBcJ_T0091394.1 MGP_BALBcJ_G0034412.1 mouse_genomes_project 9 17941823 17989548 + MGP_BALBcJ_P0091394 Pde4a protein_coding protein_coding MGP_BALBcJ_T0091395.1 MGP_BALBcJ_G0034412.1 mouse_genomes_project 9 17957892 17987927 + Pde4a protein_coding retained_intron MGP_BALBcJ_T0091396.1 MGP_BALBcJ_G0034412.1 mouse_genomes_project 9 17960377 17969733 + Pde4a protein_coding retained_intron MGP_BALBcJ_T0091397.1 MGP_BALBcJ_G0034412.1 mouse_genomes_project 9 17960379 17987927 + MGP_BALBcJ_P0091397 Pde4a protein_coding protein_coding MGP_BALBcJ_T0091398.1 MGP_BALBcJ_G0034412.1 mouse_genomes_project 9 17968435 17970977 + Pde4a protein_coding retained_intron MGP_BALBcJ_T0091399.1 MGP_BALBcJ_G0034412.1 mouse_genomes_project 9 17972880 17987927 + MGP_BALBcJ_P0091399 Pde4a protein_coding protein_coding MGP_BALBcJ_T0095100.1 MGP_BALBcJ_G0035363.1 mouse_genomes_project 9 112354989 112365004 + MGP_BALBcJ_P0095100 Tmppe protein_coding protein_coding MGP_BALBcJ_T0091121.1 MGP_BALBcJ_G0034298.1 mouse_genomes_project 9 4330292 4376999 + MGP_BALBcJ_P0091121 Mmp20 protein_coding protein_coding MGP_BALBcJ_T0093499.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84199135 84314606 - MGP_BALBcJ_P0093499 Snap91 protein_coding protein_coding MGP_BALBcJ_T0093500.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84199145 84242019 - Snap91 protein_coding retained_intron MGP_BALBcJ_T0093501.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84199148 84314616 - MGP_BALBcJ_P0093501 Snap91 protein_coding protein_coding MGP_BALBcJ_T0093502.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84199148 84314616 - MGP_BALBcJ_P0093502 Snap91 protein_coding protein_coding MGP_BALBcJ_T0093503.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84199890 84314581 - MGP_BALBcJ_P0093503 Snap91 protein_coding protein_coding MGP_BALBcJ_T0093504.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84208639 84231962 - Snap91 protein_coding retained_intron MGP_BALBcJ_T0093505.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84225860 84232136 - Snap91 protein_coding retained_intron MGP_BALBcJ_T0093506.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84239742 84263352 - Snap91 protein_coding processed_transcript MGP_BALBcJ_T0093507.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84256923 84314821 - Snap91 protein_coding retained_intron MGP_BALBcJ_T0093508.1 MGP_BALBcJ_G0035069.1 mouse_genomes_project 9 84268708 84314564 - MGP_BALBcJ_P0093508 Snap91 protein_coding protein_coding MGP_BALBcJ_T0093440.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81258724 81293634 + Ttk protein_coding retained_intron MGP_BALBcJ_T0093441.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81258725 81296530 + MGP_BALBcJ_P0093441 Ttk protein_coding protein_coding MGP_BALBcJ_T0093442.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81258752 81296527 + MGP_BALBcJ_P0093442 Ttk protein_coding protein_coding MGP_BALBcJ_T0093443.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81258768 81261533 + Ttk protein_coding retained_intron MGP_BALBcJ_T0093444.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81258775 81268373 + Ttk protein_coding processed_transcript MGP_BALBcJ_T0093445.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81258800 81267038 + MGP_BALBcJ_P0093445 Ttk protein_coding protein_coding MGP_BALBcJ_T0093446.1 MGP_BALBcJ_G0035058.1 mouse_genomes_project 9 81259816 81296209 + MGP_BALBcJ_P0093446 Ttk protein_coding unknown_likely_coding MGP_BALBcJ_T0091807.1 MGP_BALBcJ_G0034555.1 mouse_genomes_project 9 35028134 35029170 + MGP_BALBcJ_P0091807 Olfr889 protein_coding protein_coding MGP_BALBcJ_T0092010.1 MGP_BALBcJ_G0034668.1 mouse_genomes_project 9 41283635 41287778 - MGP_BALBcJ_P0092010 Pdzd3 protein_coding protein_coding MGP_BALBcJ_T0093564.1 MGP_BALBcJ_G0035082.1 mouse_genomes_project 9 86238164 86262852 + MGP_BALBcJ_P0093564 protein_coding protein_coding MGP_BALBcJ_T0094783.1 MGP_BALBcJ_G0035301.1 mouse_genomes_project 9 106718448 106745214 - MGP_BALBcJ_P0094783 Fbxw21 protein_coding protein_coding MGP_BALBcJ_T0094785.1 MGP_BALBcJ_G0035301.1 mouse_genomes_project 9 106725630 106745213 - MGP_BALBcJ_P0094785 Fbxw21 protein_coding protein_coding MGP_BALBcJ_T0092913.1 MGP_BALBcJ_G0034943.1 mouse_genomes_project 9 63322572 63328817 + MGP_BALBcJ_P0092913 Ppib protein_coding protein_coding MGP_BALBcJ_T0009256.1 MGP_BALBcJ_G0007437.1 mouse_genomes_project 9 76657507 76657946 + Gm28620 lincRNA lincRNA MGP_BALBcJ_T0099028.1 MGP_BALBcJ_G0037069.1 mouse_genomes_project 9 26442654 26444681 - Gm15521 sense_intronic sense_intronic MGP_BALBcJ_T0095340.1 MGP_BALBcJ_G0035442.1 mouse_genomes_project 9 121006852 121014498 + MGP_BALBcJ_P0095340 Zkscan7 protein_coding protein_coding MGP_BALBcJ_T0016125.1 MGP_BALBcJ_G0014222.1 mouse_genomes_project 9 107714983 107715383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009305.1 MGP_BALBcJ_G0007476.1 mouse_genomes_project 9 104915515 104916289 - 4930429P21Rik lincRNA lincRNA MGP_BALBcJ_T0009306.1 MGP_BALBcJ_G0007476.1 mouse_genomes_project 9 104916024 104918244 - 4930429P21Rik lincRNA lincRNA MGP_BALBcJ_T0094447.1 MGP_BALBcJ_G0035251.1 mouse_genomes_project 9 105558670 105560327 - MGP_BALBcJ_P0094447 Fam212a protein_coding protein_coding MGP_BALBcJ_T0094448.1 MGP_BALBcJ_G0035251.1 mouse_genomes_project 9 105559080 105560080 - MGP_BALBcJ_P0094448 Fam212a protein_coding protein_coding MGP_BALBcJ_T0016070.1 MGP_BALBcJ_G0014167.1 mouse_genomes_project 9 85498814 85500285 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093398.1 MGP_BALBcJ_G0035052.1 mouse_genomes_project 9 80218585 80239689 + MGP_BALBcJ_P0093398 Irak1bp1 protein_coding protein_coding MGP_BALBcJ_T0093399.1 MGP_BALBcJ_G0035052.1 mouse_genomes_project 9 80218851 80239022 + MGP_BALBcJ_P0093399 Irak1bp1 protein_coding protein_coding MGP_BALBcJ_T0092338.1 MGP_BALBcJ_G0034771.1 mouse_genomes_project 9 48359849 48386467 + MGP_BALBcJ_P0092338 Pou2af1 protein_coding protein_coding MGP_BALBcJ_T0101474.1 MGP_BALBcJ_G0039510.1 mouse_genomes_project 9 61417516 61417587 + Gm22455 snoRNA snoRNA MGP_BALBcJ_T0092430.1 MGP_BALBcJ_G0034808.1 mouse_genomes_project 9 52100540 52127816 + MGP_BALBcJ_P0092430 Chrna5 protein_coding protein_coding MGP_BALBcJ_T0092431.1 MGP_BALBcJ_G0034808.1 mouse_genomes_project 9 52101276 52126612 + MGP_BALBcJ_P0092431 Chrna5 protein_coding unknown_likely_coding MGP_BALBcJ_T0098675.1 MGP_BALBcJ_G0036729.1 mouse_genomes_project 9 71394415 71394534 + n-R5s86 rRNA rRNA MGP_BALBcJ_T0091844.1 MGP_BALBcJ_G0034586.1 mouse_genomes_project 9 35759935 35761003 + MGP_BALBcJ_P0091844 Olfr923 protein_coding protein_coding MGP_BALBcJ_T0009302.1 MGP_BALBcJ_G0007473.1 mouse_genomes_project 9 101925937 101949767 + Gm28548 lincRNA lincRNA MGP_BALBcJ_T0095241.1 MGP_BALBcJ_G0035412.1 mouse_genomes_project 9 118608836 118612052 + MGP_BALBcJ_P0095241 Eif1b protein_coding protein_coding MGP_BALBcJ_T0094394.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105343460 105446970 - MGP_BALBcJ_P0094394 Rbm6 protein_coding protein_coding MGP_BALBcJ_T0094395.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105343464 105446962 - MGP_BALBcJ_P0094395 Rbm6 protein_coding protein_coding MGP_BALBcJ_T0094396.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105343468 105446904 - MGP_BALBcJ_P0094396 Rbm6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094397.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105349195 105351642 - Rbm6 protein_coding retained_intron MGP_BALBcJ_T0094398.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105360022 105363907 - Rbm6 protein_coding retained_intron MGP_BALBcJ_T0094399.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105360255 105364416 - MGP_BALBcJ_P0094399 Rbm6 protein_coding protein_coding MGP_BALBcJ_T0094400.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105364424 105446874 - MGP_BALBcJ_P0094400 Rbm6 protein_coding protein_coding MGP_BALBcJ_T0094401.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105373330 105446876 - Rbm6 protein_coding processed_transcript MGP_BALBcJ_T0094402.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105384703 105419844 - Rbm6 protein_coding processed_transcript MGP_BALBcJ_T0094403.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105404100 105446885 - Rbm6 protein_coding retained_intron MGP_BALBcJ_T0094404.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105419729 105423872 - Rbm6 protein_coding retained_intron MGP_BALBcJ_T0094405.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105426059 105446916 - MGP_BALBcJ_P0094405 Rbm6 protein_coding protein_coding MGP_BALBcJ_T0094406.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105426110 105446562 - MGP_BALBcJ_P0094406 Rbm6 protein_coding protein_coding MGP_BALBcJ_T0094407.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105426148 105446912 - Rbm6 protein_coding processed_transcript MGP_BALBcJ_T0094408.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105431991 105446863 - Rbm6 protein_coding retained_intron MGP_BALBcJ_T0094409.1 MGP_BALBcJ_G0035243.1 mouse_genomes_project 9 105442980 105447378 - Rbm6 protein_coding retained_intron MGP_BALBcJ_T0100225.1 MGP_BALBcJ_G0038261.1 mouse_genomes_project 9 106357778 106357885 - Gm24259 snRNA snRNA MGP_BALBcJ_T0011031.1 MGP_BALBcJ_G0009156.1 mouse_genomes_project 9 28926319 28926445 + Gm44453 miRNA miRNA MGP_BALBcJ_T0091826.1 MGP_BALBcJ_G0034574.1 mouse_genomes_project 9 35502794 35504791 + MGP_BALBcJ_P0091826 protein_coding protein_coding MGP_BALBcJ_T0095193.1 MGP_BALBcJ_G0035393.1 mouse_genomes_project 9 117432296 117436398 - MGP_BALBcJ_P0095193 Myd88 protein_coding protein_coding MGP_BALBcJ_T0095194.1 MGP_BALBcJ_G0035393.1 mouse_genomes_project 9 117432308 117436359 - Myd88 protein_coding retained_intron MGP_BALBcJ_T0095196.1 MGP_BALBcJ_G0035393.1 mouse_genomes_project 9 117436046 117437768 - MGP_BALBcJ_P0095196 Myd88 protein_coding protein_coding MGP_BALBcJ_T0095225.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118223229 118238298 + MGP_BALBcJ_P0095225 Slc25a38 protein_coding protein_coding MGP_BALBcJ_T0095226.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118223260 118234473 + MGP_BALBcJ_P0095226 Slc25a38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095227.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118223263 118234102 + Slc25a38 protein_coding processed_transcript MGP_BALBcJ_T0095228.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118223263 118224453 + Slc25a38 protein_coding processed_transcript MGP_BALBcJ_T0095229.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118223279 118237445 + MGP_BALBcJ_P0095229 Slc25a38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095230.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118227682 118235992 + MGP_BALBcJ_P0095230 Slc25a38 protein_coding protein_coding MGP_BALBcJ_T0095231.1 MGP_BALBcJ_G0035408.1 mouse_genomes_project 9 118227821 118234077 + Slc25a38 protein_coding processed_transcript MGP_BALBcJ_T0005519.1 MGP_BALBcJ_G0004657.1 mouse_genomes_project 9 105567664 105571637 - 4921523L03Rik antisense antisense MGP_BALBcJ_T0092839.1 MGP_BALBcJ_G0034920.1 mouse_genomes_project 9 62237133 62271914 - MGP_BALBcJ_P0092839 Hacd3 protein_coding protein_coding MGP_BALBcJ_T0092632.1 MGP_BALBcJ_G0034867.1 mouse_genomes_project 9 55846284 55852727 - Rec114 protein_coding processed_transcript MGP_BALBcJ_T0092633.1 MGP_BALBcJ_G0034867.1 mouse_genomes_project 9 55846290 55933223 - MGP_BALBcJ_P0092633 Rec114 protein_coding protein_coding MGP_BALBcJ_T0092634.1 MGP_BALBcJ_G0034867.1 mouse_genomes_project 9 55846312 55857704 - Rec114 protein_coding processed_transcript MGP_BALBcJ_T0092635.1 MGP_BALBcJ_G0034867.1 mouse_genomes_project 9 55846315 55853802 - MGP_BALBcJ_P0092635 Rec114 protein_coding protein_coding MGP_BALBcJ_T0092636.1 MGP_BALBcJ_G0034867.1 mouse_genomes_project 9 55859267 55935628 - MGP_BALBcJ_P0092636 Rec114 protein_coding protein_coding MGP_BALBcJ_T0101509.1 MGP_BALBcJ_G0039545.1 mouse_genomes_project 9 118242664 118242820 + Gm24044 snoRNA snoRNA MGP_BALBcJ_T0011028.1 MGP_BALBcJ_G0009153.1 mouse_genomes_project 9 18594934 18594994 - Mir7083 miRNA miRNA MGP_BALBcJ_T0091508.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19271964 19683426 + MGP_BALBcJ_P0091508 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091509.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19271971 19683420 + MGP_BALBcJ_P0091509 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091510.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19271980 19311210 + MGP_BALBcJ_P0091510 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091511.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19271980 19683420 + MGP_BALBcJ_P0091511 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091512.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19272116 19311256 + MGP_BALBcJ_P0091512 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091513.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19287486 19683426 + MGP_BALBcJ_P0091513 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091514.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19309566 19377883 + Bbs9 protein_coding processed_transcript MGP_BALBcJ_T0091515.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19372726 19428943 + Bbs9 protein_coding processed_transcript MGP_BALBcJ_T0091516.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19435634 19683426 + MGP_BALBcJ_P0091516 Bbs9 protein_coding protein_coding MGP_BALBcJ_T0091517.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19443590 19683426 + MGP_BALBcJ_P0091517 Bbs9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091518.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19458094 19480999 + Bbs9 protein_coding retained_intron MGP_BALBcJ_T0091519.1 MGP_BALBcJ_G0034458.1 mouse_genomes_project 9 19479235 19683420 + Bbs9 protein_coding retained_intron MGP_BALBcJ_T0094973.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108704319 108707172 + Als2cl protein_coding processed_transcript MGP_BALBcJ_T0094974.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108704623 108725719 + MGP_BALBcJ_P0094974 Als2cl protein_coding protein_coding MGP_BALBcJ_T0094975.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108704655 108725725 + MGP_BALBcJ_P0094975 Als2cl protein_coding protein_coding MGP_BALBcJ_T0094976.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108704682 108709343 + MGP_BALBcJ_P0094976 Als2cl protein_coding protein_coding MGP_BALBcJ_T0094977.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108704786 108725722 + MGP_BALBcJ_P0094977 Als2cl protein_coding protein_coding MGP_BALBcJ_T0094978.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108710210 108711771 + Als2cl protein_coding retained_intron MGP_BALBcJ_T0094979.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108710751 108714597 + Als2cl protein_coding retained_intron MGP_BALBcJ_T0094980.1 MGP_BALBcJ_G0035339.1 mouse_genomes_project 9 108712439 108725723 + Als2cl protein_coding processed_transcript MGP_BALBcJ_T0092549.1 MGP_BALBcJ_G0034847.1 mouse_genomes_project 9 54798107 54805684 - MGP_BALBcJ_P0092549 Csk protein_coding unknown_likely_coding MGP_BALBcJ_T0094238.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104891562 104903112 - MGP_BALBcJ_P0094238 Hemk1 protein_coding protein_coding MGP_BALBcJ_T0094239.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104892170 104903080 - Hemk1 protein_coding retained_intron MGP_BALBcJ_T0094240.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104892188 104901421 - Hemk1 protein_coding processed_transcript MGP_BALBcJ_T0094241.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104892190 104893931 - Hemk1 protein_coding retained_intron MGP_BALBcJ_T0094242.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104892469 104903095 - MGP_BALBcJ_P0094242 Hemk1 protein_coding protein_coding MGP_BALBcJ_T0094243.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104893838 104895590 - Hemk1 protein_coding retained_intron MGP_BALBcJ_T0094244.1 MGP_BALBcJ_G0035223.1 mouse_genomes_project 9 104899903 104903064 - Hemk1 protein_coding retained_intron MGP_BALBcJ_T0091805.1 MGP_BALBcJ_G0034553.1 mouse_genomes_project 9 34995631 34996561 + MGP_BALBcJ_P0091805 Olfr887 protein_coding protein_coding MGP_BALBcJ_T0002416.1 MGP_BALBcJ_G0002325.1 mouse_genomes_project 9 95970181 95971361 + TEC TEC MGP_BALBcJ_T0005467.1 MGP_BALBcJ_G0004621.1 mouse_genomes_project 9 80837827 80861189 + Gm2087 antisense antisense MGP_BALBcJ_T0005407.1 MGP_BALBcJ_G0004582.1 mouse_genomes_project 9 33885383 33890295 + Gm3896 antisense antisense MGP_BALBcJ_T0009244.1 MGP_BALBcJ_G0007426.1 mouse_genomes_project 9 69750668 69751279 + Gm27255 lincRNA lincRNA MGP_BALBcJ_T0091955.1 MGP_BALBcJ_G0034650.1 mouse_genomes_project 9 39510833 39941570 - MGP_BALBcJ_P0091955 Grik4 protein_coding protein_coding MGP_BALBcJ_T0091956.1 MGP_BALBcJ_G0034650.1 mouse_genomes_project 9 39513280 39804812 - MGP_BALBcJ_P0091956 Grik4 protein_coding protein_coding MGP_BALBcJ_T0095352.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121185846 121232731 - MGP_BALBcJ_P0095352 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095353.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121193827 121232789 - MGP_BALBcJ_P0095353 Zdhhc3 protein_coding protein_coding MGP_BALBcJ_T0095354.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121196513 121232764 - MGP_BALBcJ_P0095354 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095355.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121197181 121232750 - MGP_BALBcJ_P0095355 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095356.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121197721 121232762 - MGP_BALBcJ_P0095356 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095357.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121197981 121219945 - MGP_BALBcJ_P0095357 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095358.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121200039 121232705 - MGP_BALBcJ_P0095358 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095359.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121202525 121232788 - Zdhhc3 protein_coding retained_intron MGP_BALBcJ_T0095360.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121203973 121232708 - MGP_BALBcJ_P0095360 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095361.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121208712 121232762 - MGP_BALBcJ_P0095361 Zdhhc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095362.1 MGP_BALBcJ_G0035448.1 mouse_genomes_project 9 121219915 121232457 - MGP_BALBcJ_P0095362 Zdhhc3 protein_coding protein_coding MGP_BALBcJ_T0092382.1 MGP_BALBcJ_G0034788.1 mouse_genomes_project 9 50809222 50834097 - MGP_BALBcJ_P0092382 Rab39 protein_coding protein_coding MGP_BALBcJ_T0091388.1 MGP_BALBcJ_G0034407.1 mouse_genomes_project 9 17835978 17840667 - MGP_BALBcJ_P0091388 Zglp1 protein_coding protein_coding MGP_BALBcJ_T0002434.1 MGP_BALBcJ_G0002343.1 mouse_genomes_project 9 99717493 99721866 + TEC TEC MGP_BALBcJ_T0093072.1 MGP_BALBcJ_G0034981.1 mouse_genomes_project 9 68807153 68814485 - MGP_BALBcJ_P0093072 Polr2m protein_coding protein_coding MGP_BALBcJ_T0093077.1 MGP_BALBcJ_G0034981.1 mouse_genomes_project 9 68810162 68814599 - MGP_BALBcJ_P0093077 Polr2m protein_coding nonsense_mediated_decay MGP_BALBcJ_T0016005.1 MGP_BALBcJ_G0014102.1 mouse_genomes_project 9 33372708 33372907 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093490.1 MGP_BALBcJ_G0035066.1 mouse_genomes_project 9 83996310 83999050 + MGP_BALBcJ_P0093490 Rwdd2a protein_coding protein_coding MGP_BALBcJ_T0093491.1 MGP_BALBcJ_G0035066.1 mouse_genomes_project 9 83996335 83999216 + MGP_BALBcJ_P0093491 Rwdd2a protein_coding protein_coding MGP_BALBcJ_T0093492.1 MGP_BALBcJ_G0035066.1 mouse_genomes_project 9 83996372 83999157 + MGP_BALBcJ_P0093492 Rwdd2a protein_coding protein_coding MGP_BALBcJ_T0100172.1 MGP_BALBcJ_G0038208.1 mouse_genomes_project 9 17245984 17246098 + Gm23316 snRNA snRNA MGP_BALBcJ_T0095224.1 MGP_BALBcJ_G0035407.1 mouse_genomes_project 9 118199996 118202776 + MGP_BALBcJ_P0095224 Ccr8 protein_coding protein_coding MGP_BALBcJ_T0092640.1 MGP_BALBcJ_G0034870.1 mouse_genomes_project 9 56479049 56503508 + MGP_BALBcJ_P0092640 Adpgk protein_coding protein_coding MGP_BALBcJ_T0016016.1 MGP_BALBcJ_G0014113.1 mouse_genomes_project 9 52419024 52420117 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009303.1 MGP_BALBcJ_G0007474.1 mouse_genomes_project 9 103701923 103703095 - Gm29208 lincRNA lincRNA MGP_BALBcJ_T0092340.1 MGP_BALBcJ_G0034773.1 mouse_genomes_project 9 48437745 48476811 - MGP_BALBcJ_P0092340 1810046K07Rik protein_coding protein_coding MGP_BALBcJ_T0092341.1 MGP_BALBcJ_G0034773.1 mouse_genomes_project 9 48438503 48460569 - MGP_BALBcJ_P0092341 1810046K07Rik protein_coding protein_coding MGP_BALBcJ_T0091304.1 MGP_BALBcJ_G0034371.1 mouse_genomes_project 9 16458632 16461591 + MGP_BALBcJ_P0091304 Olfr857 protein_coding protein_coding MGP_BALBcJ_T0009309.1 MGP_BALBcJ_G0007479.1 mouse_genomes_project 9 106179229 106180871 + 4833445I07Rik lincRNA lincRNA MGP_BALBcJ_T0009310.1 MGP_BALBcJ_G0007479.1 mouse_genomes_project 9 106179589 106180471 + 4833445I07Rik lincRNA lincRNA MGP_BALBcJ_T0100216.1 MGP_BALBcJ_G0038252.1 mouse_genomes_project 9 91746638 91746795 + Gm24200 snRNA snRNA MGP_BALBcJ_T0091296.1 MGP_BALBcJ_G0034363.1 mouse_genomes_project 9 16108959 16109898 - MGP_BALBcJ_P0091296 Olfr847 protein_coding protein_coding MGP_BALBcJ_T0002352.1 MGP_BALBcJ_G0002262.1 mouse_genomes_project 9 32695975 32697048 + TEC TEC MGP_BALBcJ_T0002401.1 MGP_BALBcJ_G0002310.1 mouse_genomes_project 9 86703395 86707274 - TEC TEC MGP_BALBcJ_T0095367.1 MGP_BALBcJ_G0035451.1 mouse_genomes_project 9 121295775 121338762 - MGP_BALBcJ_P0095367 Cdcp1 protein_coding protein_coding MGP_BALBcJ_T0095368.1 MGP_BALBcJ_G0035451.1 mouse_genomes_project 9 121298002 121303004 - Cdcp1 protein_coding retained_intron MGP_BALBcJ_T0095369.1 MGP_BALBcJ_G0035451.1 mouse_genomes_project 9 121305579 121338723 - Cdcp1 protein_coding retained_intron MGP_BALBcJ_T0091165.1 MGP_BALBcJ_G0034312.1 mouse_genomes_project 9 9967891 9970843 - MGP_BALBcJ_P0091165 Jrkl protein_coding protein_coding MGP_BALBcJ_T0091390.1 MGP_BALBcJ_G0034409.1 mouse_genomes_project 9 17847741 17866005 - MGP_BALBcJ_P0091390 Raver1 protein_coding protein_coding MGP_BALBcJ_T0101498.1 MGP_BALBcJ_G0039534.1 mouse_genomes_project 9 100568305 100568435 - Gm22595 snoRNA snoRNA MGP_BALBcJ_T0092156.1 MGP_BALBcJ_G0034716.1 mouse_genomes_project 9 42998546 43004971 - MGP_BALBcJ_P0092156 Tagln protein_coding protein_coding MGP_BALBcJ_T0092617.1 MGP_BALBcJ_G0034865.1 mouse_genomes_project 9 55715354 55731805 - MGP_BALBcJ_P0092617 Cd276 protein_coding protein_coding MGP_BALBcJ_T0092618.1 MGP_BALBcJ_G0034865.1 mouse_genomes_project 9 55715356 55746022 - MGP_BALBcJ_P0092618 Cd276 protein_coding protein_coding MGP_BALBcJ_T0005417.1 MGP_BALBcJ_G0004590.1 mouse_genomes_project 9 47594182 47614027 - Plet1os antisense antisense MGP_BALBcJ_T0005418.1 MGP_BALBcJ_G0004590.1 mouse_genomes_project 9 47594186 47611023 - Plet1os antisense antisense MGP_BALBcJ_T0005504.1 MGP_BALBcJ_G0004647.1 mouse_genomes_project 9 104213037 104215660 + Gm28111 antisense antisense MGP_BALBcJ_T0002357.1 MGP_BALBcJ_G0002267.1 mouse_genomes_project 9 69187992 69191202 - TEC TEC MGP_BALBcJ_T0094580.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106099967 106111338 + MGP_BALBcJ_P0094580 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094581.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106100205 106111976 + MGP_BALBcJ_P0094581 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094582.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106100210 106111956 + MGP_BALBcJ_P0094582 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094583.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106100210 106111956 + MGP_BALBcJ_P0094583 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094584.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106100221 106111956 + MGP_BALBcJ_P0094584 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094585.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106102028 106104260 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094586.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106102802 106103570 + MGP_BALBcJ_P0094586 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094587.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106103677 106104530 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094588.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106103706 106105100 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094589.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106103967 106111338 + MGP_BALBcJ_P0094589 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094590.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106105175 106106102 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094591.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106105985 106108196 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094592.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106106627 106108358 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094593.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106106727 106108836 + MGP_BALBcJ_P0094593 Usp19 protein_coding protein_coding MGP_BALBcJ_T0094594.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106108341 106109259 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0094595.1 MGP_BALBcJ_G0035274.1 mouse_genomes_project 9 106109788 106111336 + Usp19 protein_coding retained_intron MGP_BALBcJ_T0002341.1 MGP_BALBcJ_G0002251.1 mouse_genomes_project 9 18053177 18055873 + TEC TEC MGP_BALBcJ_T0002376.1 MGP_BALBcJ_G0002286.1 mouse_genomes_project 9 70326960 70328234 - TEC TEC MGP_BALBcJ_T0095246.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119063347 119084797 + MGP_BALBcJ_P0095246 Ctnnb1 protein_coding protein_coding MGP_BALBcJ_T0095247.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119067534 119094669 + MGP_BALBcJ_P0095247 Ctnnb1 protein_coding protein_coding MGP_BALBcJ_T0095248.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119067609 119094668 + MGP_BALBcJ_P0095248 Ctnnb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095249.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119067620 119090609 + Ctnnb1 protein_coding retained_intron MGP_BALBcJ_T0095250.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119067712 119094668 + MGP_BALBcJ_P0095250 Ctnnb1 protein_coding protein_coding MGP_BALBcJ_T0095251.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119067757 119085872 + MGP_BALBcJ_P0095251 Ctnnb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095252.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119067952 119085455 + MGP_BALBcJ_P0095252 Ctnnb1 protein_coding protein_coding MGP_BALBcJ_T0095253.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119084382 119093679 + MGP_BALBcJ_P0095253 Ctnnb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095254.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119085250 119089561 + MGP_BALBcJ_P0095254 Ctnnb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095255.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119089286 119090003 + Ctnnb1 protein_coding processed_transcript MGP_BALBcJ_T0095256.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119089458 119091801 + Ctnnb1 protein_coding processed_transcript MGP_BALBcJ_T0095257.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119089618 119091696 + MGP_BALBcJ_P0095257 Ctnnb1 protein_coding protein_coding MGP_BALBcJ_T0095258.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119090075 119093187 + MGP_BALBcJ_P0095258 Ctnnb1 protein_coding protein_coding MGP_BALBcJ_T0095259.1 MGP_BALBcJ_G0035416.1 mouse_genomes_project 9 119091028 119091986 + Ctnnb1 protein_coding retained_intron MGP_BALBcJ_T0091818.1 MGP_BALBcJ_G0034566.1 mouse_genomes_project 9 35321492 35323603 + MGP_BALBcJ_P0091818 Olfr147 protein_coding protein_coding MGP_BALBcJ_T0005471.1 MGP_BALBcJ_G0004625.1 mouse_genomes_project 9 93081730 93111991 - Gm16126 antisense antisense MGP_BALBcJ_T0092555.1 MGP_BALBcJ_G0034851.1 mouse_genomes_project 9 54924129 54939010 - MGP_BALBcJ_P0092555 Clk3 protein_coding protein_coding MGP_BALBcJ_T0095188.1 MGP_BALBcJ_G0035391.1 mouse_genomes_project 9 117312890 117325474 - MGP_BALBcJ_P0095188 protein_coding protein_coding MGP_BALBcJ_T0092531.1 MGP_BALBcJ_G0034834.1 mouse_genomes_project 9 54314392 54317651 - MGP_BALBcJ_P0092531 Commd4 protein_coding protein_coding MGP_BALBcJ_T0011050.1 MGP_BALBcJ_G0009175.1 mouse_genomes_project 9 59343082 59343159 - Mir5133 miRNA miRNA MGP_BALBcJ_T0092928.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63627688 63651602 + Herc1 protein_coding retained_intron MGP_BALBcJ_T0092929.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63627764 63787309 + MGP_BALBcJ_P0092929 Herc1 protein_coding protein_coding MGP_BALBcJ_T0092930.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63627799 63787313 + MGP_BALBcJ_P0092930 Herc1 protein_coding unknown_likely_coding MGP_BALBcJ_T0092931.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63720847 63731098 + Herc1 protein_coding retained_intron MGP_BALBcJ_T0092932.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63729924 63743712 + MGP_BALBcJ_P0092932 Herc1 protein_coding protein_coding MGP_BALBcJ_T0092933.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63747573 63755650 + Herc1 protein_coding retained_intron MGP_BALBcJ_T0092934.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63775397 63779362 + Herc1 protein_coding retained_intron MGP_BALBcJ_T0092935.1 MGP_BALBcJ_G0034948.1 mouse_genomes_project 9 63779096 63786127 + Herc1 protein_coding retained_intron MGP_BALBcJ_T0016040.1 MGP_BALBcJ_G0014137.1 mouse_genomes_project 9 71920122 71920312 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092458.1 MGP_BALBcJ_G0034815.1 mouse_genomes_project 9 52571264 52634830 - MGP_BALBcJ_P0092458 Etfa protein_coding protein_coding MGP_BALBcJ_T0092459.1 MGP_BALBcJ_G0034815.1 mouse_genomes_project 9 52594358 52608410 - Etfa protein_coding processed_transcript MGP_BALBcJ_T0092460.1 MGP_BALBcJ_G0034815.1 mouse_genomes_project 9 52607633 52634707 - Etfa protein_coding processed_transcript MGP_BALBcJ_T0092461.1 MGP_BALBcJ_G0034815.1 mouse_genomes_project 9 52609722 52634395 - Etfa protein_coding processed_transcript MGP_BALBcJ_T0093323.1 MGP_BALBcJ_G0035032.1 mouse_genomes_project 9 75597209 75614695 + MGP_BALBcJ_P0093323 Gsta4 protein_coding protein_coding MGP_BALBcJ_T0092572.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55208544 55299250 - MGP_BALBcJ_P0092572 Ccdc33 protein_coding unknown_likely_coding MGP_BALBcJ_T0092573.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55208551 55282205 - MGP_BALBcJ_P0092573 Ccdc33 protein_coding protein_coding MGP_BALBcJ_T0092574.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55208552 55299329 - MGP_BALBcJ_P0092574 Ccdc33 protein_coding protein_coding MGP_BALBcJ_T0092575.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55208556 55282133 - MGP_BALBcJ_P0092575 Ccdc33 protein_coding protein_coding MGP_BALBcJ_T0092576.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55208593 55210851 - Ccdc33 protein_coding retained_intron MGP_BALBcJ_T0092577.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55213106 55221760 - Ccdc33 protein_coding processed_transcript MGP_BALBcJ_T0092579.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55247405 55294866 - Ccdc33 protein_coding processed_transcript MGP_BALBcJ_T0092580.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55256918 55261975 - Ccdc33 protein_coding retained_intron MGP_BALBcJ_T0092583.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55266229 55282205 - Ccdc33 protein_coding retained_intron MGP_BALBcJ_T0092584.1 MGP_BALBcJ_G0034856.1 mouse_genomes_project 9 55291696 55299313 - MGP_BALBcJ_P0092584 Ccdc33 protein_coding protein_coding MGP_BALBcJ_T0098411.1 MGP_BALBcJ_G0036465.1 mouse_genomes_project 9 35102566 35103493 + pseudogene pseudogene MGP_BALBcJ_T0093010.1 MGP_BALBcJ_G0034965.1 mouse_genomes_project 9 66788382 66826852 + MGP_BALBcJ_P0093010 Anxa2 protein_coding protein_coding MGP_BALBcJ_T0093011.1 MGP_BALBcJ_G0034965.1 mouse_genomes_project 9 66788478 66820302 + MGP_BALBcJ_P0093011 Anxa2 protein_coding protein_coding MGP_BALBcJ_T0093012.1 MGP_BALBcJ_G0034965.1 mouse_genomes_project 9 66788828 66818904 + MGP_BALBcJ_P0093012 Anxa2 protein_coding protein_coding MGP_BALBcJ_T0093013.1 MGP_BALBcJ_G0034965.1 mouse_genomes_project 9 66813511 66826852 + Anxa2 protein_coding retained_intron MGP_BALBcJ_T0093014.1 MGP_BALBcJ_G0034965.1 mouse_genomes_project 9 66815157 66826570 + MGP_BALBcJ_P0093014 Anxa2 protein_coding protein_coding MGP_BALBcJ_T0093015.1 MGP_BALBcJ_G0034965.1 mouse_genomes_project 9 66821827 66823153 + Anxa2 protein_coding retained_intron MGP_BALBcJ_T0092596.1 MGP_BALBcJ_G0034858.1 mouse_genomes_project 9 55337084 55340041 - MGP_BALBcJ_P0092596 Islr protein_coding protein_coding MGP_BALBcJ_T0092597.1 MGP_BALBcJ_G0034858.1 mouse_genomes_project 9 55337084 55339374 - MGP_BALBcJ_P0092597 Islr protein_coding protein_coding MGP_BALBcJ_T0009243.1 MGP_BALBcJ_G0007425.1 mouse_genomes_project 9 69537423 69563435 - Gm27188 lincRNA lincRNA MGP_BALBcJ_T0095215.1 MGP_BALBcJ_G0035402.1 mouse_genomes_project 9 118026723 118038611 - MGP_BALBcJ_P0095215 Gorasp1 protein_coding protein_coding MGP_BALBcJ_T0095089.1 MGP_BALBcJ_G0035358.1 mouse_genomes_project 9 111846202 111907421 - MGP_BALBcJ_P0095089 Fbxl2 protein_coding protein_coding MGP_BALBcJ_T0095090.1 MGP_BALBcJ_G0035358.1 mouse_genomes_project 9 111859508 111907453 - MGP_BALBcJ_P0095090 Fbxl2 protein_coding protein_coding MGP_BALBcJ_T0095091.1 MGP_BALBcJ_G0035358.1 mouse_genomes_project 9 111860838 111907418 - MGP_BALBcJ_P0095091 Fbxl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095092.1 MGP_BALBcJ_G0035358.1 mouse_genomes_project 9 111866140 111874096 - Fbxl2 protein_coding retained_intron MGP_BALBcJ_T0095093.1 MGP_BALBcJ_G0035358.1 mouse_genomes_project 9 111871987 111907466 - Fbxl2 protein_coding retained_intron MGP_BALBcJ_T0095094.1 MGP_BALBcJ_G0035358.1 mouse_genomes_project 9 111885727 111927743 - Fbxl2 protein_coding processed_transcript MGP_BALBcJ_T0002455.1 MGP_BALBcJ_G0002364.1 mouse_genomes_project 9 106141733 106143667 + TEC TEC MGP_BALBcJ_T0005409.1 MGP_BALBcJ_G0004584.1 mouse_genomes_project 9 39010953 39022307 + Gm16214 antisense antisense MGP_BALBcJ_T0091884.1 MGP_BALBcJ_G0034620.1 mouse_genomes_project 9 36818638 36819574 + MGP_BALBcJ_P0091884 protein_coding protein_coding MGP_BALBcJ_T0091461.1 MGP_BALBcJ_G0034431.1 mouse_genomes_project 9 18551051 18583207 - MGP_BALBcJ_P0091461 Kank2 protein_coding protein_coding MGP_BALBcJ_T0093303.1 MGP_BALBcJ_G0035027.1 mouse_genomes_project 9 75156001 75196162 + MGP_BALBcJ_P0093303 Gclc protein_coding protein_coding MGP_BALBcJ_T0011053.1 MGP_BALBcJ_G0009178.1 mouse_genomes_project 9 61976031 61976138 - miRNA miRNA MGP_BALBcJ_T0093168.1 MGP_BALBcJ_G0034993.1 mouse_genomes_project 9 70310924 70327737 + MGP_BALBcJ_P0093168 Dyx1c1 protein_coding protein_coding MGP_BALBcJ_T0093169.1 MGP_BALBcJ_G0034993.1 mouse_genomes_project 9 70310924 70327740 + MGP_BALBcJ_P0093169 Dyx1c1 protein_coding protein_coding MGP_BALBcJ_T0094982.1 MGP_BALBcJ_G0035341.1 mouse_genomes_project 9 108764068 108771581 - MGP_BALBcJ_P0094982 Tdgf1 protein_coding protein_coding MGP_BALBcJ_T0094983.1 MGP_BALBcJ_G0035341.1 mouse_genomes_project 9 108764723 108771517 - MGP_BALBcJ_P0094983 Tdgf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094984.1 MGP_BALBcJ_G0035341.1 mouse_genomes_project 9 108767315 108771498 - MGP_BALBcJ_P0094984 Tdgf1 protein_coding protein_coding MGP_BALBcJ_T0094985.1 MGP_BALBcJ_G0035341.1 mouse_genomes_project 9 108767600 108770296 - MGP_BALBcJ_P0094985 Tdgf1 protein_coding protein_coding MGP_BALBcJ_T0009268.1 MGP_BALBcJ_G0007447.1 mouse_genomes_project 9 87262229 87300656 + 4930524O08Rik lincRNA lincRNA MGP_BALBcJ_T0009269.1 MGP_BALBcJ_G0007447.1 mouse_genomes_project 9 87262654 87275647 + 4930524O08Rik lincRNA lincRNA MGP_BALBcJ_T0009270.1 MGP_BALBcJ_G0007447.1 mouse_genomes_project 9 87262692 87274989 + 4930524O08Rik lincRNA lincRNA MGP_BALBcJ_T0093948.1 MGP_BALBcJ_G0035170.1 mouse_genomes_project 9 100801054 100839427 - MGP_BALBcJ_P0093948 1300017J02Rik protein_coding protein_coding MGP_BALBcJ_T0093949.1 MGP_BALBcJ_G0035170.1 mouse_genomes_project 9 100801055 100807745 - 1300017J02Rik protein_coding retained_intron MGP_BALBcJ_T0093950.1 MGP_BALBcJ_G0035170.1 mouse_genomes_project 9 100801157 100839354 - MGP_BALBcJ_P0093950 1300017J02Rik protein_coding protein_coding MGP_BALBcJ_T0093951.1 MGP_BALBcJ_G0035170.1 mouse_genomes_project 9 100802370 100817187 - MGP_BALBcJ_P0093951 1300017J02Rik protein_coding protein_coding MGP_BALBcJ_T0093952.1 MGP_BALBcJ_G0035170.1 mouse_genomes_project 9 100821770 100839427 - 1300017J02Rik protein_coding processed_transcript MGP_BALBcJ_T0093953.1 MGP_BALBcJ_G0035170.1 mouse_genomes_project 9 100834063 100852440 - MGP_BALBcJ_P0093953 1300017J02Rik protein_coding protein_coding MGP_BALBcJ_T0016051.1 MGP_BALBcJ_G0014148.1 mouse_genomes_project 9 74687692 74688094 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092371.1 MGP_BALBcJ_G0034786.1 mouse_genomes_project 9 50702576 50734308 - MGP_BALBcJ_P0092371 protein_coding protein_coding MGP_BALBcJ_T0092372.1 MGP_BALBcJ_G0034786.1 mouse_genomes_project 9 50704541 50705812 - protein_coding processed_transcript MGP_BALBcJ_T0005524.1 MGP_BALBcJ_G0004662.1 mouse_genomes_project 9 107208518 107222579 + antisense antisense MGP_BALBcJ_T0091677.1 MGP_BALBcJ_G0034503.1 mouse_genomes_project 9 32132864 32140860 + MGP_BALBcJ_P0091677 Rpusd4 protein_coding protein_coding MGP_BALBcJ_T0091678.1 MGP_BALBcJ_G0034503.1 mouse_genomes_project 9 32137234 32140105 + Rpusd4 protein_coding retained_intron MGP_BALBcJ_T0091679.1 MGP_BALBcJ_G0034503.1 mouse_genomes_project 9 32137590 32138705 + Rpusd4 protein_coding retained_intron MGP_BALBcJ_T0091680.1 MGP_BALBcJ_G0034503.1 mouse_genomes_project 9 32140091 32142603 + MGP_BALBcJ_P0091680 Rpusd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011072.1 MGP_BALBcJ_G0009197.1 mouse_genomes_project 9 104794812 104794900 - Gm22238 miRNA miRNA MGP_BALBcJ_T0015993.1 MGP_BALBcJ_G0014090.1 mouse_genomes_project 9 18314763 18315122 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095339.1 MGP_BALBcJ_G0035441.1 mouse_genomes_project 9 120961005 120970997 - MGP_BALBcJ_P0095339 Zfp445 protein_coding protein_coding MGP_BALBcJ_T0016006.1 MGP_BALBcJ_G0014103.1 mouse_genomes_project 9 33426465 33426857 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002432.1 MGP_BALBcJ_G0002341.1 mouse_genomes_project 9 99528633 99529681 + TEC TEC MGP_BALBcJ_T0098682.1 MGP_BALBcJ_G0036736.1 mouse_genomes_project 9 109443499 109443617 - n-R5s90 rRNA rRNA MGP_BALBcJ_T0093929.1 MGP_BALBcJ_G0035165.1 mouse_genomes_project 9 100533507 100566744 + Slco2a1 protein_coding processed_transcript MGP_BALBcJ_T0093930.1 MGP_BALBcJ_G0035165.1 mouse_genomes_project 9 100553976 100640220 + MGP_BALBcJ_P0093930 Slco2a1 protein_coding protein_coding MGP_BALBcJ_T0093931.1 MGP_BALBcJ_G0035165.1 mouse_genomes_project 9 100554128 100557884 + Slco2a1 protein_coding retained_intron MGP_BALBcJ_T0093932.1 MGP_BALBcJ_G0035165.1 mouse_genomes_project 9 100554473 100645630 + MGP_BALBcJ_P0093932 Slco2a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093025.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353452 67363781 + MGP_BALBcJ_P0093025 Gtf2a2 protein_coding protein_coding MGP_BALBcJ_T0093026.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353456 67363653 + Gtf2a2 protein_coding retained_intron MGP_BALBcJ_T0093027.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353467 67363652 + MGP_BALBcJ_P0093027 Gtf2a2 protein_coding protein_coding MGP_BALBcJ_T0093028.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353468 67363653 + MGP_BALBcJ_P0093028 Gtf2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093029.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353470 67363430 + Gtf2a2 protein_coding processed_transcript MGP_BALBcJ_T0093030.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353473 67359130 + Gtf2a2 protein_coding retained_intron MGP_BALBcJ_T0093031.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353473 67363652 + MGP_BALBcJ_P0093031 Gtf2a2 protein_coding protein_coding MGP_BALBcJ_T0093032.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353476 67360383 + MGP_BALBcJ_P0093032 Gtf2a2 protein_coding protein_coding MGP_BALBcJ_T0093033.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353481 67360378 + Gtf2a2 protein_coding retained_intron MGP_BALBcJ_T0093034.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353486 67356541 + Gtf2a2 protein_coding retained_intron MGP_BALBcJ_T0093035.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353497 67360395 + MGP_BALBcJ_P0093035 Gtf2a2 protein_coding protein_coding MGP_BALBcJ_T0093036.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67353545 67363653 + MGP_BALBcJ_P0093036 Gtf2a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093037.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67356714 67363652 + Gtf2a2 protein_coding processed_transcript MGP_BALBcJ_T0093038.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67357721 67360819 + Gtf2a2 protein_coding retained_intron MGP_BALBcJ_T0093039.1 MGP_BALBcJ_G0034968.1 mouse_genomes_project 9 67359956 67363652 + Gtf2a2 protein_coding retained_intron MGP_BALBcJ_T0091122.1 MGP_BALBcJ_G0034299.1 mouse_genomes_project 9 4395885 4403381 + MGP_BALBcJ_P0091122 Mmp7 protein_coding protein_coding MGP_BALBcJ_T0018504.1 MGP_BALBcJ_G0015682.1 mouse_genomes_project 9 70391781 70394850 + 2310009A05Rik processed_transcript antisense MGP_BALBcJ_T0018505.1 MGP_BALBcJ_G0015682.1 mouse_genomes_project 9 70391793 70394432 + 2310009A05Rik processed_transcript retained_intron MGP_BALBcJ_T0002464.1 MGP_BALBcJ_G0002373.1 mouse_genomes_project 9 108350731 108352818 + TEC TEC MGP_BALBcJ_T0094329.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105180557 105202371 - MGP_BALBcJ_P0094329 Gnai2 protein_coding protein_coding MGP_BALBcJ_T0094330.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105180557 105202316 - MGP_BALBcJ_P0094330 Gnai2 protein_coding protein_coding MGP_BALBcJ_T0094331.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105181372 105182480 - Gnai2 protein_coding retained_intron MGP_BALBcJ_T0094332.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105182088 105182944 - Gnai2 protein_coding retained_intron MGP_BALBcJ_T0094333.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105182657 105183815 - Gnai2 protein_coding retained_intron MGP_BALBcJ_T0094334.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105182932 105193630 - MGP_BALBcJ_P0094334 Gnai2 protein_coding protein_coding MGP_BALBcJ_T0094335.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105185945 105202338 - Gnai2 protein_coding retained_intron MGP_BALBcJ_T0094336.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105186381 105187314 - Gnai2 protein_coding retained_intron MGP_BALBcJ_T0094337.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105186503 105202341 - MGP_BALBcJ_P0094337 Gnai2 protein_coding protein_coding MGP_BALBcJ_T0094338.1 MGP_BALBcJ_G0035238.1 mouse_genomes_project 9 105202103 105202347 - MGP_BALBcJ_P0094338 Gnai2 protein_coding protein_coding MGP_BALBcJ_T0016026.1 MGP_BALBcJ_G0014123.1 mouse_genomes_project 9 69163258 69163520 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091463.1 MGP_BALBcJ_G0034433.1 mouse_genomes_project 9 18620891 18622728 + MGP_BALBcJ_P0091463 Angptl8 protein_coding protein_coding MGP_BALBcJ_T0016047.1 MGP_BALBcJ_G0014144.1 mouse_genomes_project 9 74255330 74255628 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005421.1 MGP_BALBcJ_G0004592.1 mouse_genomes_project 9 48973784 49015572 - Arhgap20os antisense antisense MGP_BALBcJ_T0005422.1 MGP_BALBcJ_G0004592.1 mouse_genomes_project 9 48980477 49015459 - Arhgap20os antisense antisense MGP_BALBcJ_T0005423.1 MGP_BALBcJ_G0004592.1 mouse_genomes_project 9 48980485 49015571 - Arhgap20os antisense antisense MGP_BALBcJ_T0005424.1 MGP_BALBcJ_G0004592.1 mouse_genomes_project 9 48981342 49015444 - Arhgap20os antisense antisense MGP_BALBcJ_T0091406.1 MGP_BALBcJ_G0034415.1 mouse_genomes_project 9 18043411 18052477 + MGP_BALBcJ_P0091406 Atg4d protein_coding protein_coding MGP_BALBcJ_T0095076.1 MGP_BALBcJ_G0035354.1 mouse_genomes_project 9 111521762 111578147 - MGP_BALBcJ_P0095076 Pdcd6ip protein_coding protein_coding MGP_BALBcJ_T0095077.1 MGP_BALBcJ_G0035354.1 mouse_genomes_project 9 111524490 111578132 - MGP_BALBcJ_P0095077 Pdcd6ip protein_coding protein_coding MGP_BALBcJ_T0095078.1 MGP_BALBcJ_G0035354.1 mouse_genomes_project 9 111525584 111527309 - Pdcd6ip protein_coding retained_intron MGP_BALBcJ_T0095079.1 MGP_BALBcJ_G0035354.1 mouse_genomes_project 9 111529649 111532429 - Pdcd6ip protein_coding retained_intron MGP_BALBcJ_T0095080.1 MGP_BALBcJ_G0035354.1 mouse_genomes_project 9 111544436 111555416 - Pdcd6ip protein_coding processed_transcript MGP_BALBcJ_T0095081.1 MGP_BALBcJ_G0035354.1 mouse_genomes_project 9 111557513 111567480 - Pdcd6ip protein_coding retained_intron MGP_BALBcJ_T0091234.1 MGP_BALBcJ_G0034334.1 mouse_genomes_project 9 11946719 11966223 - MGP_BALBcJ_P0091234 Med17 protein_coding protein_coding MGP_BALBcJ_T0100209.1 MGP_BALBcJ_G0038245.1 mouse_genomes_project 9 79846456 79846553 - Gm24393 snRNA snRNA MGP_BALBcJ_T0100163.1 MGP_BALBcJ_G0038199.1 mouse_genomes_project 9 87562 87666 + Gm23275 snRNA snRNA MGP_BALBcJ_T0093134.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69792210 69834248 - MGP_BALBcJ_P0093134 Tex9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093135.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69800411 69834248 - MGP_BALBcJ_P0093135 Tex9 protein_coding protein_coding MGP_BALBcJ_T0093136.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69802180 69816848 - Tex9 protein_coding retained_intron MGP_BALBcJ_T0093137.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69802911 69834504 - MGP_BALBcJ_P0093137 Tex9 protein_coding protein_coding MGP_BALBcJ_T0093138.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69802939 69834499 - MGP_BALBcJ_P0093138 Tex9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093139.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69803015 69834393 - MGP_BALBcJ_P0093139 Tex9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093140.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69803037 69834289 - MGP_BALBcJ_P0093140 Tex9 protein_coding protein_coding MGP_BALBcJ_T0093141.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69803762 69834253 - Tex9 protein_coding retained_intron MGP_BALBcJ_T0093142.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69803781 69822173 - Tex9 protein_coding processed_transcript MGP_BALBcJ_T0093143.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69803811 69830308 - MGP_BALBcJ_P0093143 Tex9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093144.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69819608 69820474 - Tex9 protein_coding retained_intron MGP_BALBcJ_T0093145.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69819708 69829067 - MGP_BALBcJ_P0093145 Tex9 protein_coding protein_coding MGP_BALBcJ_T0093146.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69819709 69834231 - MGP_BALBcJ_P0093146 Tex9 protein_coding protein_coding MGP_BALBcJ_T0093147.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69822109 69834381 - Tex9 protein_coding retained_intron MGP_BALBcJ_T0093148.1 MGP_BALBcJ_G0034988.1 mouse_genomes_project 9 69822288 69834227 - Tex9 protein_coding retained_intron MGP_BALBcJ_T0095110.1 MGP_BALBcJ_G0035372.1 mouse_genomes_project 9 112869032 112903703 - MGP_BALBcJ_P0095110 Gpd1l protein_coding protein_coding MGP_BALBcJ_T0095111.1 MGP_BALBcJ_G0035372.1 mouse_genomes_project 9 112873015 112903591 - MGP_BALBcJ_P0095111 Gpd1l protein_coding protein_coding MGP_BALBcJ_T0095112.1 MGP_BALBcJ_G0035372.1 mouse_genomes_project 9 112880626 112888922 - Gpd1l protein_coding processed_transcript MGP_BALBcJ_T0101478.1 MGP_BALBcJ_G0039514.1 mouse_genomes_project 9 65837415 65837488 + Gm22962 snoRNA snoRNA MGP_BALBcJ_T0094570.1 MGP_BALBcJ_G0035272.1 mouse_genomes_project 9 106069894 106075306 + MGP_BALBcJ_P0094570 Ccdc71 protein_coding protein_coding MGP_BALBcJ_T0094571.1 MGP_BALBcJ_G0035272.1 mouse_genomes_project 9 106069902 106072635 + MGP_BALBcJ_P0094571 Ccdc71 protein_coding protein_coding MGP_BALBcJ_T0094572.1 MGP_BALBcJ_G0035272.1 mouse_genomes_project 9 106070787 106075174 + MGP_BALBcJ_P0094572 Ccdc71 protein_coding protein_coding MGP_BALBcJ_T0091532.1 MGP_BALBcJ_G0034463.1 mouse_genomes_project 9 21444642 21445285 + MGP_BALBcJ_P0091532 Cypt4 protein_coding protein_coding MGP_BALBcJ_T0009186.1 MGP_BALBcJ_G0007378.1 mouse_genomes_project 9 17193126 17333148 + lincRNA lincRNA MGP_BALBcJ_T0011043.1 MGP_BALBcJ_G0009168.1 mouse_genomes_project 9 48248584 48248661 - Mir34c miRNA miRNA MGP_BALBcJ_T0093909.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100258556 100262598 + MGP_BALBcJ_P0093909 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093910.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100258686 100276303 + MGP_BALBcJ_P0093910 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093911.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100259173 100262610 + MGP_BALBcJ_P0093911 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093912.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100259552 100276308 + MGP_BALBcJ_P0093912 Amotl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093913.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100259767 100276311 + MGP_BALBcJ_P0093913 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093914.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100260313 100262269 + MGP_BALBcJ_P0093914 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093915.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100260354 100262277 + MGP_BALBcJ_P0093915 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093916.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100260369 100262089 + MGP_BALBcJ_P0093916 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093917.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100260452 100270380 + MGP_BALBcJ_P0093917 Amotl2 protein_coding protein_coding MGP_BALBcJ_T0093918.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100264179 100270203 + Amotl2 protein_coding processed_transcript MGP_BALBcJ_T0093919.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100264397 100276308 + Amotl2 protein_coding retained_intron MGP_BALBcJ_T0093920.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100270207 100275231 + Amotl2 protein_coding processed_transcript MGP_BALBcJ_T0093921.1 MGP_BALBcJ_G0035162.1 mouse_genomes_project 9 100273620 100275217 + Amotl2 protein_coding retained_intron MGP_BALBcJ_T0092556.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54964186 55010541 - MGP_BALBcJ_P0092556 Arid3b protein_coding protein_coding MGP_BALBcJ_T0092557.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54964189 55010543 - MGP_BALBcJ_P0092557 Arid3b protein_coding protein_coding MGP_BALBcJ_T0092558.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54964192 54965482 - Arid3b protein_coding processed_transcript MGP_BALBcJ_T0092559.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54964346 55008068 - MGP_BALBcJ_P0092559 Arid3b protein_coding protein_coding MGP_BALBcJ_T0092560.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54965994 54970058 - MGP_BALBcJ_P0092560 Arid3b protein_coding protein_coding MGP_BALBcJ_T0092561.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54966256 55010313 - MGP_BALBcJ_P0092561 Arid3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092562.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54968522 55010596 - MGP_BALBcJ_P0092562 Arid3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092563.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54968523 55010628 - MGP_BALBcJ_P0092563 Arid3b protein_coding protein_coding MGP_BALBcJ_T0092564.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54971986 54994467 - MGP_BALBcJ_P0092564 Arid3b protein_coding protein_coding MGP_BALBcJ_T0092565.1 MGP_BALBcJ_G0034852.1 mouse_genomes_project 9 54981966 55010605 - Arid3b protein_coding retained_intron MGP_BALBcJ_T0005517.1 MGP_BALBcJ_G0004655.1 mouse_genomes_project 9 105332709 105333485 + Gm37850 antisense antisense MGP_BALBcJ_T0091851.1 MGP_BALBcJ_G0034593.1 mouse_genomes_project 9 35941086 35943219 - MGP_BALBcJ_P0091851 Olfr935 protein_coding protein_coding MGP_BALBcJ_T0101487.1 MGP_BALBcJ_G0039523.1 mouse_genomes_project 9 83188239 83188369 - Gm22830 snoRNA snoRNA MGP_BALBcJ_T0091375.1 MGP_BALBcJ_G0034399.1 mouse_genomes_project 9 17656204 17660208 + MGP_BALBcJ_P0091375 Ppan protein_coding protein_coding MGP_BALBcJ_T0091376.1 MGP_BALBcJ_G0034399.1 mouse_genomes_project 9 17656279 17658371 + Ppan protein_coding retained_intron MGP_BALBcJ_T0091377.1 MGP_BALBcJ_G0034399.1 mouse_genomes_project 9 17656296 17657712 + Ppan protein_coding retained_intron MGP_BALBcJ_T0091378.1 MGP_BALBcJ_G0034399.1 mouse_genomes_project 9 17656314 17660208 + Ppan protein_coding retained_intron MGP_BALBcJ_T0091379.1 MGP_BALBcJ_G0034399.1 mouse_genomes_project 9 17658667 17659384 + Ppan protein_coding retained_intron MGP_BALBcJ_T0091380.1 MGP_BALBcJ_G0034399.1 mouse_genomes_project 9 17659236 17659712 + Ppan protein_coding retained_intron MGP_BALBcJ_T0092803.1 MGP_BALBcJ_G0034911.1 mouse_genomes_project 9 61426267 61497691 - MGP_BALBcJ_P0092803 Map2k1 protein_coding protein_coding MGP_BALBcJ_T0092804.1 MGP_BALBcJ_G0034911.1 mouse_genomes_project 9 61427026 61428362 - Map2k1 protein_coding retained_intron MGP_BALBcJ_T0092805.1 MGP_BALBcJ_G0034911.1 mouse_genomes_project 9 61427234 61428754 - Map2k1 protein_coding retained_intron MGP_BALBcJ_T0092806.1 MGP_BALBcJ_G0034911.1 mouse_genomes_project 9 61427786 61436399 - Map2k1 protein_coding processed_transcript MGP_BALBcJ_T0091114.1 MGP_BALBcJ_G0034293.1 mouse_genomes_project 9 4164200 4176752 + MGP_BALBcJ_P0091114 Mmp1b protein_coding protein_coding MGP_BALBcJ_T0002436.1 MGP_BALBcJ_G0002345.1 mouse_genomes_project 9 100239246 100242069 - TEC TEC MGP_BALBcJ_T0095311.1 MGP_BALBcJ_G0035430.1 mouse_genomes_project 9 120018574 120032342 + MGP_BALBcJ_P0095311 Ackr2 protein_coding protein_coding MGP_BALBcJ_T0091319.1 MGP_BALBcJ_G0034386.1 mouse_genomes_project 9 17115311 17142689 - MGP_BALBcJ_P0091319 Zfp560 protein_coding protein_coding MGP_BALBcJ_T0091320.1 MGP_BALBcJ_G0034386.1 mouse_genomes_project 9 17122693 17142689 - Zfp560 protein_coding retained_intron MGP_BALBcJ_T0091695.1 MGP_BALBcJ_G0034509.1 mouse_genomes_project 9 32472959 32479252 - MGP_BALBcJ_P0091695 Pate4 protein_coding protein_coding MGP_BALBcJ_T0091602.1 MGP_BALBcJ_G0034487.1 mouse_genomes_project 9 28114357 28165290 + MGP_BALBcJ_P0091602 Prdm10 protein_coding protein_coding MGP_BALBcJ_T0091603.1 MGP_BALBcJ_G0034487.1 mouse_genomes_project 9 28148217 28216998 + MGP_BALBcJ_P0091603 Prdm10 protein_coding unknown_likely_coding MGP_BALBcJ_T0091604.1 MGP_BALBcJ_G0034487.1 mouse_genomes_project 9 28149497 28165279 + Prdm10 protein_coding retained_intron MGP_BALBcJ_T0091605.1 MGP_BALBcJ_G0034487.1 mouse_genomes_project 9 28149796 28213805 + MGP_BALBcJ_P0091605 Prdm10 protein_coding protein_coding MGP_BALBcJ_T0091465.1 MGP_BALBcJ_G0034434.1 mouse_genomes_project 9 18690644 18701346 - MGP_BALBcJ_P0091465 Rab3d protein_coding protein_coding MGP_BALBcJ_T0091466.1 MGP_BALBcJ_G0034434.1 mouse_genomes_project 9 18690663 18701293 - MGP_BALBcJ_P0091466 Rab3d protein_coding protein_coding MGP_BALBcJ_T0091467.1 MGP_BALBcJ_G0034434.1 mouse_genomes_project 9 18691795 18701271 - MGP_BALBcJ_P0091467 Rab3d protein_coding protein_coding MGP_BALBcJ_T0091468.1 MGP_BALBcJ_G0034434.1 mouse_genomes_project 9 18698045 18701243 - MGP_BALBcJ_P0091468 Rab3d protein_coding protein_coding MGP_BALBcJ_T0091469.1 MGP_BALBcJ_G0034434.1 mouse_genomes_project 9 18698768 18701275 - Rab3d protein_coding retained_intron MGP_BALBcJ_T0009223.1 MGP_BALBcJ_G0007410.1 mouse_genomes_project 9 54234281 54235079 - 2700012I20Rik lincRNA lincRNA MGP_BALBcJ_T0011048.1 MGP_BALBcJ_G0009173.1 mouse_genomes_project 9 51820972 51821041 + Mir5710 miRNA miRNA MGP_BALBcJ_T0092922.1 MGP_BALBcJ_G0034946.1 mouse_genomes_project 9 63389329 63402076 + MGP_BALBcJ_P0092922 Fam96a protein_coding unknown_likely_coding MGP_BALBcJ_T0092923.1 MGP_BALBcJ_G0034946.1 mouse_genomes_project 9 63389360 63402597 + MGP_BALBcJ_P0092923 Fam96a protein_coding protein_coding MGP_BALBcJ_T0005404.1 MGP_BALBcJ_G0004579.1 mouse_genomes_project 9 29577809 29579329 - Gm27240 antisense antisense MGP_BALBcJ_T0100198.1 MGP_BALBcJ_G0038234.1 mouse_genomes_project 9 65785549 65785656 - Gm22169 snRNA snRNA MGP_BALBcJ_T0092423.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069455 52077227 + MGP_BALBcJ_P0092423 Psma4 protein_coding protein_coding MGP_BALBcJ_T0092424.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069463 52075052 + Psma4 protein_coding retained_intron MGP_BALBcJ_T0092425.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069470 52073698 + Psma4 protein_coding retained_intron MGP_BALBcJ_T0092426.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069480 52071472 + Psma4 protein_coding processed_transcript MGP_BALBcJ_T0092427.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069480 52075599 + MGP_BALBcJ_P0092427 Psma4 protein_coding protein_coding MGP_BALBcJ_T0092428.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069555 52072092 + Psma4 protein_coding retained_intron MGP_BALBcJ_T0092429.1 MGP_BALBcJ_G0034807.1 mouse_genomes_project 9 52069769 52074965 + MGP_BALBcJ_P0092429 Psma4 protein_coding protein_coding MGP_BALBcJ_T0009289.1 MGP_BALBcJ_G0007461.1 mouse_genomes_project 9 95669570 95670197 - 2610303G11Rik lincRNA lincRNA MGP_BALBcJ_T0091696.1 MGP_BALBcJ_G0034510.1 mouse_genomes_project 9 32503722 32506808 - MGP_BALBcJ_P0091696 Pate3 protein_coding protein_coding MGP_BALBcJ_T0092470.1 MGP_BALBcJ_G0034819.1 mouse_genomes_project 9 53166798 53192605 + MGP_BALBcJ_P0092470 Rcn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092471.1 MGP_BALBcJ_G0034819.1 mouse_genomes_project 9 53166810 53189800 + MGP_BALBcJ_P0092471 Rcn2 protein_coding protein_coding MGP_BALBcJ_T0092472.1 MGP_BALBcJ_G0034819.1 mouse_genomes_project 9 53166823 53169180 + Rcn2 protein_coding retained_intron MGP_BALBcJ_T0092473.1 MGP_BALBcJ_G0034819.1 mouse_genomes_project 9 53166838 53178085 + Rcn2 protein_coding retained_intron MGP_BALBcJ_T0091787.1 MGP_BALBcJ_G0034540.1 mouse_genomes_project 9 34496468 34531213 + MGP_BALBcJ_P0091787 Siae protein_coding protein_coding MGP_BALBcJ_T0018465.1 MGP_BALBcJ_G0015671.1 mouse_genomes_project 9 31982852 31997568 + 4930581F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0018466.1 MGP_BALBcJ_G0015671.1 mouse_genomes_project 9 31982891 31984917 + 4930581F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0018467.1 MGP_BALBcJ_G0015671.1 mouse_genomes_project 9 31984061 31990287 + 4930581F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0018468.1 MGP_BALBcJ_G0015671.1 mouse_genomes_project 9 31984628 31993037 + 4930581F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0018469.1 MGP_BALBcJ_G0015671.1 mouse_genomes_project 9 31984712 31990715 + 4930581F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0018470.1 MGP_BALBcJ_G0015671.1 mouse_genomes_project 9 31984842 31993544 + 4930581F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0095373.1 MGP_BALBcJ_G0035455.1 mouse_genomes_project 9 121671670 121734198 + MGP_BALBcJ_P0095373 Sacm1l protein_coding protein_coding MGP_BALBcJ_T0095245.1 MGP_BALBcJ_G0035415.1 mouse_genomes_project 9 118696649 118697376 + MGP_BALBcJ_P0095245 5830454E08Rik protein_coding protein_coding MGP_BALBcJ_T0093718.1 MGP_BALBcJ_G0035117.1 mouse_genomes_project 9 93802173 93836849 - MGP_BALBcJ_P0093718 Atp1b3 protein_coding protein_coding MGP_BALBcJ_T0093719.1 MGP_BALBcJ_G0035117.1 mouse_genomes_project 9 93811066 93815971 - Atp1b3 protein_coding retained_intron MGP_BALBcJ_T0093720.1 MGP_BALBcJ_G0035117.1 mouse_genomes_project 9 93818362 93821944 - Atp1b3 protein_coding processed_transcript MGP_BALBcJ_T0009275.1 MGP_BALBcJ_G0007452.1 mouse_genomes_project 9 89772243 89775404 - Gm29139 lincRNA lincRNA MGP_BALBcJ_T0002387.1 MGP_BALBcJ_G0002297.1 mouse_genomes_project 9 80516716 80519521 + TEC TEC MGP_BALBcJ_T0091624.1 MGP_BALBcJ_G0034492.1 mouse_genomes_project 9 29179697 29210692 - MGP_BALBcJ_P0091624 Kcnj5 protein_coding protein_coding MGP_BALBcJ_T0002388.1 MGP_BALBcJ_G0002298.1 mouse_genomes_project 9 80854147 80856768 + TEC TEC MGP_BALBcJ_T0091865.1 MGP_BALBcJ_G0034607.1 mouse_genomes_project 9 36518987 36519929 - MGP_BALBcJ_P0091865 Olfr958 protein_coding protein_coding MGP_BALBcJ_T0093657.1 MGP_BALBcJ_G0035107.1 mouse_genomes_project 9 92853712 92860935 - MGP_BALBcJ_P0093657 Chst2 protein_coding protein_coding MGP_BALBcJ_T0095313.1 MGP_BALBcJ_G0035432.1 mouse_genomes_project 9 120058413 120067269 + MGP_BALBcJ_P0095313 1700048O20Rik protein_coding protein_coding MGP_BALBcJ_T0094784.1 MGP_BALBcJ_G0035302.1 mouse_genomes_project 9 106722096 107387727 - MGP_BALBcJ_P0094784 Fbxw15 protein_coding protein_coding MGP_BALBcJ_T0094801.1 MGP_BALBcJ_G0035302.1 mouse_genomes_project 9 107222398 107270340 - MGP_BALBcJ_P0094801 Fbxw15 protein_coding protein_coding MGP_BALBcJ_T0092012.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41309764 41315187 - Abcg4 protein_coding retained_intron MGP_BALBcJ_T0092013.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41309764 41324573 - MGP_BALBcJ_P0092013 Abcg4 protein_coding protein_coding MGP_BALBcJ_T0092014.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41309766 41325641 - MGP_BALBcJ_P0092014 Abcg4 protein_coding protein_coding MGP_BALBcJ_T0092015.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41311028 41316411 - Abcg4 protein_coding retained_intron MGP_BALBcJ_T0092016.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41311671 41316173 - MGP_BALBcJ_P0092016 Abcg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092017.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41313643 41324565 - Abcg4 protein_coding processed_transcript MGP_BALBcJ_T0092018.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41314075 41316364 - Abcg4 protein_coding retained_intron MGP_BALBcJ_T0092019.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41317220 41318231 - Abcg4 protein_coding retained_intron MGP_BALBcJ_T0092020.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41318418 41325383 - MGP_BALBcJ_P0092020 Abcg4 protein_coding protein_coding MGP_BALBcJ_T0092021.1 MGP_BALBcJ_G0034670.1 mouse_genomes_project 9 41318481 41325164 - MGP_BALBcJ_P0092021 Abcg4 protein_coding protein_coding MGP_BALBcJ_T0009207.1 MGP_BALBcJ_G0007397.1 mouse_genomes_project 9 33528502 33547169 - 1700027I24Rik lincRNA lincRNA MGP_BALBcJ_T0092254.1 MGP_BALBcJ_G0034752.1 mouse_genomes_project 9 47667693 47672019 - MGP_BALBcJ_P0092254 Tex12 protein_coding protein_coding MGP_BALBcJ_T0092238.1 MGP_BALBcJ_G0034743.1 mouse_genomes_project 9 46376962 46387171 + MGP_BALBcJ_P0092238 Gm4894 protein_coding protein_coding MGP_BALBcJ_T0011026.1 MGP_BALBcJ_G0009151.1 mouse_genomes_project 9 18278909 18278979 - Mir199a-1 miRNA miRNA MGP_BALBcJ_T0091451.1 MGP_BALBcJ_G0034426.1 mouse_genomes_project 9 18370727 18374850 - MGP_BALBcJ_P0091451 Yipf2 protein_coding protein_coding MGP_BALBcJ_T0091452.1 MGP_BALBcJ_G0034426.1 mouse_genomes_project 9 18370727 18374850 - MGP_BALBcJ_P0091452 Yipf2 protein_coding protein_coding MGP_BALBcJ_T0091453.1 MGP_BALBcJ_G0034426.1 mouse_genomes_project 9 18370727 18374850 - MGP_BALBcJ_P0091453 Yipf2 protein_coding protein_coding MGP_BALBcJ_T0094667.1 MGP_BALBcJ_G0035283.1 mouse_genomes_project 9 106280040 106282343 + Slc25a20 protein_coding retained_intron MGP_BALBcJ_T0094668.1 MGP_BALBcJ_G0035283.1 mouse_genomes_project 9 106280050 106301659 + MGP_BALBcJ_P0094668 Slc25a20 protein_coding protein_coding MGP_BALBcJ_T0094669.1 MGP_BALBcJ_G0035283.1 mouse_genomes_project 9 106289354 106297744 + Slc25a20 protein_coding retained_intron MGP_BALBcJ_T0002443.1 MGP_BALBcJ_G0002352.1 mouse_genomes_project 9 101822427 101823940 + TEC TEC MGP_BALBcJ_T0091688.1 MGP_BALBcJ_G0034506.1 mouse_genomes_project 9 32422918 32431461 + Pus3 protein_coding retained_intron MGP_BALBcJ_T0091689.1 MGP_BALBcJ_G0034506.1 mouse_genomes_project 9 32423783 32431724 + MGP_BALBcJ_P0091689 Pus3 protein_coding protein_coding MGP_BALBcJ_T0091690.1 MGP_BALBcJ_G0034506.1 mouse_genomes_project 9 32423789 32431162 + MGP_BALBcJ_P0091690 Pus3 protein_coding protein_coding MGP_BALBcJ_T0009326.1 MGP_BALBcJ_G0007489.1 mouse_genomes_project 9 116472400 116474401 - Platr11 lincRNA lincRNA MGP_BALBcJ_T0091106.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4045379 4050786 + MGP_BALBcJ_P0091106 Mmp12 protein_coding protein_coding MGP_BALBcJ_T0091107.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4045395 4058940 + MGP_BALBcJ_P0091107 Mmp12 protein_coding protein_coding MGP_BALBcJ_T0091108.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4048372 4060937 + MGP_BALBcJ_P0091108 Mmp12 protein_coding protein_coding MGP_BALBcJ_T0091109.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4048372 4070410 + MGP_BALBcJ_P0091109 Mmp12 protein_coding protein_coding MGP_BALBcJ_T0091110.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4048404 4058139 + Mmp12 protein_coding retained_intron MGP_BALBcJ_T0091111.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4048404 4049332 + Mmp12 protein_coding processed_transcript MGP_BALBcJ_T0091112.1 MGP_BALBcJ_G0034291.1 mouse_genomes_project 9 4048404 4059364 + MGP_BALBcJ_P0091112 Mmp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092384.1 MGP_BALBcJ_G0034790.1 mouse_genomes_project 9 50971124 50974718 + MGP_BALBcJ_P0092384 Sln protein_coding protein_coding MGP_BALBcJ_T0091967.1 MGP_BALBcJ_G0034658.1 mouse_genomes_project 9 40840879 40843435 + MGP_BALBcJ_P0091967 Gm3898 protein_coding protein_coding MGP_BALBcJ_T0092891.1 MGP_BALBcJ_G0034941.1 mouse_genomes_project 9 63159266 63172623 + MGP_BALBcJ_P0092891 2810417H13Rik protein_coding protein_coding MGP_BALBcJ_T0092892.1 MGP_BALBcJ_G0034941.1 mouse_genomes_project 9 63159349 63162875 + 2810417H13Rik protein_coding retained_intron MGP_BALBcJ_T0092893.1 MGP_BALBcJ_G0034941.1 mouse_genomes_project 9 63159391 63162203 + 2810417H13Rik protein_coding retained_intron MGP_BALBcJ_T0091253.1 MGP_BALBcJ_G0034338.1 mouse_genomes_project 9 12197169 12237255 + MGP_BALBcJ_P0091253 Smco4 protein_coding protein_coding MGP_BALBcJ_T0091254.1 MGP_BALBcJ_G0034338.1 mouse_genomes_project 9 12212846 12237252 + MGP_BALBcJ_P0091254 Smco4 protein_coding protein_coding MGP_BALBcJ_T0093842.1 MGP_BALBcJ_G0035149.1 mouse_genomes_project 9 97381402 97383475 - MGP_BALBcJ_P0093842 Sox14 protein_coding protein_coding MGP_BALBcJ_T0093843.1 MGP_BALBcJ_G0035149.1 mouse_genomes_project 9 97381516 97382961 - MGP_BALBcJ_P0093843 Sox14 protein_coding protein_coding MGP_BALBcJ_T0091809.1 MGP_BALBcJ_G0034557.1 mouse_genomes_project 9 35091207 35092158 - MGP_BALBcJ_P0091809 Olfr891 protein_coding protein_coding MGP_BALBcJ_T0094529.1 MGP_BALBcJ_G0035264.1 mouse_genomes_project 9 105909458 105912500 - MGP_BALBcJ_P0094529 Tcta protein_coding protein_coding MGP_BALBcJ_T0094530.1 MGP_BALBcJ_G0035264.1 mouse_genomes_project 9 105910154 105912670 - MGP_BALBcJ_P0094530 Tcta protein_coding protein_coding MGP_BALBcJ_T0094531.1 MGP_BALBcJ_G0035264.1 mouse_genomes_project 9 105910390 105912458 - MGP_BALBcJ_P0094531 Tcta protein_coding protein_coding MGP_BALBcJ_T0094552.1 MGP_BALBcJ_G0035269.1 mouse_genomes_project 9 106010611 106038550 - MGP_BALBcJ_P0094552 Ccdc36 protein_coding protein_coding MGP_BALBcJ_T0093824.1 MGP_BALBcJ_G0035145.1 mouse_genomes_project 9 97077687 97086402 + MGP_BALBcJ_P0093824 Dbr1 protein_coding protein_coding MGP_BALBcJ_T0093825.1 MGP_BALBcJ_G0035145.1 mouse_genomes_project 9 97077716 97084330 + MGP_BALBcJ_P0093825 Dbr1 protein_coding protein_coding MGP_BALBcJ_T0093826.1 MGP_BALBcJ_G0035145.1 mouse_genomes_project 9 97077968 97083938 + MGP_BALBcJ_P0093826 Dbr1 protein_coding protein_coding MGP_BALBcJ_T0093827.1 MGP_BALBcJ_G0035145.1 mouse_genomes_project 9 97077996 97083947 + MGP_BALBcJ_P0093827 Dbr1 protein_coding protein_coding MGP_BALBcJ_T0093828.1 MGP_BALBcJ_G0035145.1 mouse_genomes_project 9 97082090 97085739 + MGP_BALBcJ_P0093828 Dbr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093829.1 MGP_BALBcJ_G0035145.1 mouse_genomes_project 9 97082185 97084578 + MGP_BALBcJ_P0093829 Dbr1 protein_coding protein_coding MGP_BALBcJ_T0091273.1 MGP_BALBcJ_G0034345.1 mouse_genomes_project 9 15128128 15135329 + MGP_BALBcJ_P0091273 Ubtfl1 protein_coding protein_coding MGP_BALBcJ_T0091274.1 MGP_BALBcJ_G0034345.1 mouse_genomes_project 9 15128130 15135152 + MGP_BALBcJ_P0091274 Ubtfl1 protein_coding protein_coding MGP_BALBcJ_T0091275.1 MGP_BALBcJ_G0034345.1 mouse_genomes_project 9 15133062 15134711 + MGP_BALBcJ_P0091275 Ubtfl1 protein_coding protein_coding MGP_BALBcJ_T0092126.1 MGP_BALBcJ_G0034707.1 mouse_genomes_project 9 42312976 42328005 - MGP_BALBcJ_P0092126 Il10ra protein_coding protein_coding MGP_BALBcJ_T0092127.1 MGP_BALBcJ_G0034707.1 mouse_genomes_project 9 42312979 42328005 - MGP_BALBcJ_P0092127 Il10ra protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092128.1 MGP_BALBcJ_G0034707.1 mouse_genomes_project 9 42313666 42328002 - MGP_BALBcJ_P0092128 Il10ra protein_coding protein_coding MGP_BALBcJ_T0005397.1 MGP_BALBcJ_G0004574.1 mouse_genomes_project 9 18985912 19002976 - 1810064F22Rik antisense antisense MGP_BALBcJ_T0005398.1 MGP_BALBcJ_G0004574.1 mouse_genomes_project 9 18995756 19002997 - 1810064F22Rik antisense antisense MGP_BALBcJ_T0005399.1 MGP_BALBcJ_G0004574.1 mouse_genomes_project 9 18996316 18997522 - 1810064F22Rik antisense antisense MGP_BALBcJ_T0002367.1 MGP_BALBcJ_G0002277.1 mouse_genomes_project 9 69725776 69728529 + TEC TEC MGP_BALBcJ_T0091152.1 MGP_BALBcJ_G0034308.1 mouse_genomes_project 9 5615210 5683807 + MGP_BALBcJ_P0091152 Pgr protein_coding protein_coding MGP_BALBcJ_T0091153.1 MGP_BALBcJ_G0034308.1 mouse_genomes_project 9 5615796 5663866 + Pgr protein_coding retained_intron MGP_BALBcJ_T0091154.1 MGP_BALBcJ_G0034308.1 mouse_genomes_project 9 5615845 5680614 + MGP_BALBcJ_P0091154 Pgr protein_coding protein_coding MGP_BALBcJ_T0011079.1 MGP_BALBcJ_G0009204.1 mouse_genomes_project 9 106545249 106545331 + Mir711 miRNA miRNA MGP_BALBcJ_T0094670.1 MGP_BALBcJ_G0035284.1 mouse_genomes_project 9 106306742 106346786 + MGP_BALBcJ_P0094670 Prkar2a protein_coding protein_coding MGP_BALBcJ_T0094671.1 MGP_BALBcJ_G0035284.1 mouse_genomes_project 9 106309565 106369084 + MGP_BALBcJ_P0094671 Prkar2a protein_coding protein_coding MGP_BALBcJ_T0094672.1 MGP_BALBcJ_G0035284.1 mouse_genomes_project 9 106309879 106365643 + MGP_BALBcJ_P0094672 Prkar2a protein_coding protein_coding MGP_BALBcJ_T0094673.1 MGP_BALBcJ_G0035284.1 mouse_genomes_project 9 106334553 106362964 + MGP_BALBcJ_P0094673 Prkar2a protein_coding protein_coding MGP_BALBcJ_T0094674.1 MGP_BALBcJ_G0035284.1 mouse_genomes_project 9 106358710 106360028 + Prkar2a protein_coding retained_intron MGP_BALBcJ_T0094675.1 MGP_BALBcJ_G0035284.1 mouse_genomes_project 9 106366893 106368152 + Prkar2a protein_coding processed_transcript MGP_BALBcJ_T0094046.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102969568 103024234 - MGP_BALBcJ_P0094046 Atp2c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094047.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102969568 103085009 - MGP_BALBcJ_P0094047 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094048.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102969575 103057518 - MGP_BALBcJ_P0094048 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094049.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102975349 103058195 - MGP_BALBcJ_P0094049 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094050.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102975729 103058234 - MGP_BALBcJ_P0094050 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094051.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102975730 103085119 - MGP_BALBcJ_P0094051 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094052.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102977334 103000412 - Atp2c1 protein_coding processed_transcript MGP_BALBcJ_T0094053.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102979121 102982201 - Atp2c1 protein_coding retained_intron MGP_BALBcJ_T0094054.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102984017 102996564 - Atp2c1 protein_coding retained_intron MGP_BALBcJ_T0094055.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102986706 103058178 - MGP_BALBcJ_P0094055 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094056.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 102999014 103005971 - Atp2c1 protein_coding retained_intron MGP_BALBcJ_T0094057.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103008688 103057560 - Atp2c1 protein_coding processed_transcript MGP_BALBcJ_T0094058.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103015088 103033520 - MGP_BALBcJ_P0094058 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094059.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103016058 103058148 - MGP_BALBcJ_P0094059 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094060.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103016722 103058596 - Atp2c1 protein_coding retained_intron MGP_BALBcJ_T0094061.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103016778 103057711 - MGP_BALBcJ_P0094061 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094062.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103022507 103091188 - Atp2c1 protein_coding processed_transcript MGP_BALBcJ_T0094063.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103022507 103058584 - MGP_BALBcJ_P0094063 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094064.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103024220 103058206 - MGP_BALBcJ_P0094064 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094065.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103027809 103057765 - MGP_BALBcJ_P0094065 Atp2c1 protein_coding protein_coding MGP_BALBcJ_T0094066.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103032232 103058206 - Atp2c1 protein_coding retained_intron MGP_BALBcJ_T0094067.1 MGP_BALBcJ_G0035188.1 mouse_genomes_project 9 103083863 103085276 - Atp2c1 protein_coding retained_intron MGP_BALBcJ_T0092093.1 MGP_BALBcJ_G0034694.1 mouse_genomes_project 9 41964746 41972493 - MGP_BALBcJ_P0092093 Atp5l protein_coding protein_coding MGP_BALBcJ_T0093647.1 MGP_BALBcJ_G0035104.1 mouse_genomes_project 9 90001570 90067497 + MGP_BALBcJ_P0093647 Plod2 protein_coding protein_coding MGP_BALBcJ_T0093648.1 MGP_BALBcJ_G0035104.1 mouse_genomes_project 9 90001611 90067489 + MGP_BALBcJ_P0093648 Plod2 protein_coding protein_coding MGP_BALBcJ_T0093649.1 MGP_BALBcJ_G0035104.1 mouse_genomes_project 9 90032981 90050512 + Plod2 protein_coding retained_intron MGP_BALBcJ_T0093650.1 MGP_BALBcJ_G0035104.1 mouse_genomes_project 9 90054172 90059892 + Plod2 protein_coding retained_intron MGP_BALBcJ_T0093651.1 MGP_BALBcJ_G0035104.1 mouse_genomes_project 9 90060167 90061443 + Plod2 protein_coding retained_intron MGP_BALBcJ_T0009189.1 MGP_BALBcJ_G0007381.1 mouse_genomes_project 9 18184743 18191222 - Gm16853 lincRNA lincRNA MGP_BALBcJ_T0094844.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880849 107897597 - MGP_BALBcJ_P0094844 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094845.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880849 107912385 - MGP_BALBcJ_P0094845 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094846.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880849 107912793 - MGP_BALBcJ_P0094846 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094847.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880849 107912396 - MGP_BALBcJ_P0094847 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094848.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880850 107906196 - Dhx30 protein_coding retained_intron MGP_BALBcJ_T0094849.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880850 107881521 - MGP_BALBcJ_P0094849 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094850.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880850 107910040 - MGP_BALBcJ_P0094850 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094851.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880850 107881580 - MGP_BALBcJ_P0094851 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094852.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880850 107912400 - MGP_BALBcJ_P0094852 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094853.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880851 107912374 - MGP_BALBcJ_P0094853 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094854.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107880852 107912298 - MGP_BALBcJ_P0094854 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094855.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107881047 107882045 - MGP_BALBcJ_P0094855 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094856.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107882848 107883984 - Dhx30 protein_coding retained_intron MGP_BALBcJ_T0094857.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107884472 107888002 - Dhx30 protein_coding retained_intron MGP_BALBcJ_T0094858.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107886331 107906665 - Dhx30 protein_coding retained_intron MGP_BALBcJ_T0094859.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107889490 107897549 - MGP_BALBcJ_P0094859 Dhx30 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094860.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107889598 107911747 - MGP_BALBcJ_P0094860 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094861.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107889640 107897548 - MGP_BALBcJ_P0094861 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094862.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107895260 107910269 - MGP_BALBcJ_P0094862 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094863.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107895348 107912050 - MGP_BALBcJ_P0094863 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094864.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107905314 107912382 - MGP_BALBcJ_P0094864 Dhx30 protein_coding protein_coding MGP_BALBcJ_T0094865.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107908040 107912394 - Dhx30 protein_coding processed_transcript MGP_BALBcJ_T0094866.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107909138 107912337 - Dhx30 protein_coding retained_intron MGP_BALBcJ_T0094867.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107910076 107912595 - Dhx30 protein_coding processed_transcript MGP_BALBcJ_T0094868.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107910384 107912071 - Dhx30 protein_coding processed_transcript MGP_BALBcJ_T0094869.1 MGP_BALBcJ_G0035317.1 mouse_genomes_project 9 107910453 107912348 - Dhx30 protein_coding processed_transcript MGP_BALBcJ_T0091850.1 MGP_BALBcJ_G0034592.1 mouse_genomes_project 9 35919688 35920621 - MGP_BALBcJ_P0091850 Olfr934 protein_coding protein_coding MGP_BALBcJ_T0018511.1 MGP_BALBcJ_G0015684.1 mouse_genomes_project 9 74939023 74940532 + Gm19569 processed_transcript lincRNA MGP_BALBcJ_T0018512.1 MGP_BALBcJ_G0015684.1 mouse_genomes_project 9 74939266 74940532 + Gm19569 processed_transcript retained_intron MGP_BALBcJ_T0091699.1 MGP_BALBcJ_G0034511.1 mouse_genomes_project 9 32546492 32548784 - MGP_BALBcJ_P0091699 Pate1 protein_coding protein_coding MGP_BALBcJ_T0091700.1 MGP_BALBcJ_G0034511.1 mouse_genomes_project 9 32546838 32548803 - Pate1 protein_coding retained_intron MGP_BALBcJ_T0092552.1 MGP_BALBcJ_G0034850.1 mouse_genomes_project 9 54881991 54925918 + MGP_BALBcJ_P0092552 Edc3 protein_coding protein_coding MGP_BALBcJ_T0092553.1 MGP_BALBcJ_G0034850.1 mouse_genomes_project 9 54882006 54924822 + MGP_BALBcJ_P0092553 Edc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092554.1 MGP_BALBcJ_G0034850.1 mouse_genomes_project 9 54882018 54889454 + MGP_BALBcJ_P0092554 Edc3 protein_coding protein_coding MGP_BALBcJ_T0094550.1 MGP_BALBcJ_G0035268.1 mouse_genomes_project 9 105999821 106018228 + MGP_BALBcJ_P0094550 1700102P08Rik protein_coding protein_coding MGP_BALBcJ_T0094551.1 MGP_BALBcJ_G0035268.1 mouse_genomes_project 9 105999850 106004779 + MGP_BALBcJ_P0094551 1700102P08Rik protein_coding protein_coding MGP_BALBcJ_T0094910.1 MGP_BALBcJ_G0035325.1 mouse_genomes_project 9 108281464 108294425 + MGP_BALBcJ_P0094910 Kif9 protein_coding protein_coding MGP_BALBcJ_T0094911.1 MGP_BALBcJ_G0035325.1 mouse_genomes_project 9 108281500 108331487 + MGP_BALBcJ_P0094911 Kif9 protein_coding protein_coding MGP_BALBcJ_T0094912.1 MGP_BALBcJ_G0035325.1 mouse_genomes_project 9 108281500 108331628 + MGP_BALBcJ_P0094912 Kif9 protein_coding protein_coding MGP_BALBcJ_T0094913.1 MGP_BALBcJ_G0035325.1 mouse_genomes_project 9 108281500 108328580 + MGP_BALBcJ_P0094913 Kif9 protein_coding protein_coding MGP_BALBcJ_T0094914.1 MGP_BALBcJ_G0035325.1 mouse_genomes_project 9 108282711 108330286 + MGP_BALBcJ_P0094914 Kif9 protein_coding protein_coding MGP_BALBcJ_T0093308.1 MGP_BALBcJ_G0035029.1 mouse_genomes_project 9 75458845 75472483 + MGP_BALBcJ_P0093308 Gcm1 protein_coding protein_coding MGP_BALBcJ_T0011726.1 MGP_BALBcJ_G0009851.1 mouse_genomes_project 9 104208488 104208748 + Gm26185 misc_RNA misc_RNA MGP_BALBcJ_T0016089.1 MGP_BALBcJ_G0014186.1 mouse_genomes_project 9 92865322 92866309 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009234.1 MGP_BALBcJ_G0007419.1 mouse_genomes_project 9 60034983 60038986 + Gm26609 lincRNA lincRNA MGP_BALBcJ_T0095039.1 MGP_BALBcJ_G0035350.1 mouse_genomes_project 9 109264508 109314831 + MGP_BALBcJ_P0095039 Dclk3 protein_coding protein_coding MGP_BALBcJ_T0091717.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33562462 33580885 - MGP_BALBcJ_P0091717 Chek1 protein_coding protein_coding MGP_BALBcJ_T0091718.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33562462 33581169 - MGP_BALBcJ_P0091718 Chek1 protein_coding protein_coding MGP_BALBcJ_T0091719.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33563408 33581096 - MGP_BALBcJ_P0091719 Chek1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091720.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33564125 33580379 - MGP_BALBcJ_P0091720 Chek1 protein_coding protein_coding MGP_BALBcJ_T0091721.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33564125 33580379 - MGP_BALBcJ_P0091721 Chek1 protein_coding protein_coding MGP_BALBcJ_T0091722.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33567711 33577262 - Chek1 protein_coding retained_intron MGP_BALBcJ_T0091723.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33577165 33581576 - Chek1 protein_coding processed_transcript MGP_BALBcJ_T0091724.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33578119 33581081 - Chek1 protein_coding retained_intron MGP_BALBcJ_T0091725.1 MGP_BALBcJ_G0034524.1 mouse_genomes_project 9 33578378 33580962 - MGP_BALBcJ_P0091725 Chek1 protein_coding protein_coding MGP_BALBcJ_T0091215.1 MGP_BALBcJ_G0034327.1 mouse_genomes_project 9 11453111 11455867 - MGP_BALBcJ_P0091215 Ankrd49 protein_coding protein_coding MGP_BALBcJ_T0091874.1 MGP_BALBcJ_G0034610.1 mouse_genomes_project 9 36582639 36583656 + MGP_BALBcJ_P0091874 Olfr148 protein_coding protein_coding MGP_BALBcJ_T0101450.1 MGP_BALBcJ_G0039486.1 mouse_genomes_project 9 17658786 17658866 + Gm23008 snoRNA snoRNA MGP_BALBcJ_T0091856.1 MGP_BALBcJ_G0034598.1 mouse_genomes_project 9 36117033 36135848 + MGP_BALBcJ_P0091856 Olfr943 protein_coding protein_coding MGP_BALBcJ_T0101463.1 MGP_BALBcJ_G0039499.1 mouse_genomes_project 9 39309007 39309139 - Gm26272 snoRNA snoRNA MGP_BALBcJ_T0091308.1 MGP_BALBcJ_G0034375.1 mouse_genomes_project 9 16643208 16644243 - MGP_BALBcJ_P0091308 Olfr862 protein_coding protein_coding MGP_BALBcJ_T0092258.1 MGP_BALBcJ_G0034755.1 mouse_genomes_project 9 47715217 47716637 + MGP_BALBcJ_P0092258 Timm8b protein_coding protein_coding MGP_BALBcJ_T0093268.1 MGP_BALBcJ_G0035020.1 mouse_genomes_project 9 73510596 73557751 - MGP_BALBcJ_P0093268 Gfral protein_coding protein_coding MGP_BALBcJ_T0093269.1 MGP_BALBcJ_G0035020.1 mouse_genomes_project 9 73510596 73557751 - MGP_BALBcJ_P0093269 Gfral protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092038.1 MGP_BALBcJ_G0034679.1 mouse_genomes_project 9 41439554 41443270 - MGP_BALBcJ_P0092038 Trappc4 protein_coding protein_coding MGP_BALBcJ_T0091374.1 MGP_BALBcJ_G0034398.1 mouse_genomes_project 9 17642773 17648666 - MGP_BALBcJ_P0091374 Angptl6 protein_coding protein_coding MGP_BALBcJ_T0091369.1 MGP_BALBcJ_G0034397.1 mouse_genomes_project 9 17637606 17643252 + MGP_BALBcJ_P0091369 A230050P20Rik protein_coding protein_coding MGP_BALBcJ_T0091370.1 MGP_BALBcJ_G0034397.1 mouse_genomes_project 9 17637622 17643252 + A230050P20Rik protein_coding retained_intron MGP_BALBcJ_T0091371.1 MGP_BALBcJ_G0034397.1 mouse_genomes_project 9 17637644 17639060 + A230050P20Rik protein_coding processed_transcript MGP_BALBcJ_T0091372.1 MGP_BALBcJ_G0034397.1 mouse_genomes_project 9 17638241 17642736 + A230050P20Rik protein_coding retained_intron MGP_BALBcJ_T0091373.1 MGP_BALBcJ_G0034397.1 mouse_genomes_project 9 17639736 17642086 + A230050P20Rik protein_coding retained_intron MGP_BALBcJ_T0092836.1 MGP_BALBcJ_G0034919.1 mouse_genomes_project 9 62210348 62237123 + MGP_BALBcJ_P0092836 Vwa9 protein_coding protein_coding MGP_BALBcJ_T0092837.1 MGP_BALBcJ_G0034919.1 mouse_genomes_project 9 62210426 62236792 + MGP_BALBcJ_P0092837 Vwa9 protein_coding unknown_likely_coding MGP_BALBcJ_T0092838.1 MGP_BALBcJ_G0034919.1 mouse_genomes_project 9 62210453 62237123 + MGP_BALBcJ_P0092838 Vwa9 protein_coding protein_coding MGP_BALBcJ_T0091536.1 MGP_BALBcJ_G0034466.1 mouse_genomes_project 9 22079384 22136030 + MGP_BALBcJ_P0091536 Sept7 protein_coding protein_coding MGP_BALBcJ_T0091537.1 MGP_BALBcJ_G0034466.1 mouse_genomes_project 9 22079384 22136030 + MGP_BALBcJ_P0091537 Sept7 protein_coding protein_coding MGP_BALBcJ_T0091287.1 MGP_BALBcJ_G0034354.1 mouse_genomes_project 9 15665893 15687286 - MGP_BALBcJ_P0091287 protein_coding protein_coding MGP_BALBcJ_T0091104.1 MGP_BALBcJ_G0034289.1 mouse_genomes_project 9 3888042 3906774 + MGP_BALBcJ_P0091104 Dcun1d5 protein_coding protein_coding MGP_BALBcJ_T0002353.1 MGP_BALBcJ_G0002263.1 mouse_genomes_project 9 53395755 53397324 + TEC TEC MGP_BALBcJ_T0092113.1 MGP_BALBcJ_G0034702.1 mouse_genomes_project 9 42166190 42195302 - MGP_BALBcJ_P0092113 Gm10684 protein_coding protein_coding MGP_BALBcJ_T0009247.1 MGP_BALBcJ_G0007429.1 mouse_genomes_project 9 70545098 70621371 + Gm27211 lincRNA lincRNA MGP_BALBcJ_T0095137.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116097406 116122792 + MGP_BALBcJ_P0095137 Azi2 protein_coding protein_coding MGP_BALBcJ_T0095138.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116097464 116121119 + MGP_BALBcJ_P0095138 Azi2 protein_coding protein_coding MGP_BALBcJ_T0095139.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116097486 116118872 + MGP_BALBcJ_P0095139 Azi2 protein_coding protein_coding MGP_BALBcJ_T0095140.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116097523 116128749 + MGP_BALBcJ_P0095140 Azi2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095141.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116097594 116107120 + Azi2 protein_coding retained_intron MGP_BALBcJ_T0095142.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116106214 116120869 + MGP_BALBcJ_P0095142 Azi2 protein_coding protein_coding MGP_BALBcJ_T0095143.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116106275 116108229 + Azi2 protein_coding retained_intron MGP_BALBcJ_T0095144.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116107456 116120264 + MGP_BALBcJ_P0095144 Azi2 protein_coding protein_coding MGP_BALBcJ_T0095145.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116112054 116120166 + Azi2 protein_coding retained_intron MGP_BALBcJ_T0095146.1 MGP_BALBcJ_G0035379.1 mouse_genomes_project 9 116115920 116120640 + MGP_BALBcJ_P0095146 Azi2 protein_coding protein_coding MGP_BALBcJ_T0091118.1 MGP_BALBcJ_G0034297.1 mouse_genomes_project 9 4274771 4286122 + MGP_BALBcJ_P0091118 Mmp27 protein_coding protein_coding MGP_BALBcJ_T0091119.1 MGP_BALBcJ_G0034297.1 mouse_genomes_project 9 4274833 4286117 + MGP_BALBcJ_P0091119 Mmp27 protein_coding protein_coding MGP_BALBcJ_T0091120.1 MGP_BALBcJ_G0034297.1 mouse_genomes_project 9 4274838 4286592 + MGP_BALBcJ_P0091120 Mmp27 protein_coding protein_coding MGP_BALBcJ_T0093613.1 MGP_BALBcJ_G0035095.1 mouse_genomes_project 9 87648899 87717596 - MGP_BALBcJ_P0093613 Tbc1d2b protein_coding protein_coding MGP_BALBcJ_T0093614.1 MGP_BALBcJ_G0035095.1 mouse_genomes_project 9 87675917 87717631 - MGP_BALBcJ_P0093614 Tbc1d2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093615.1 MGP_BALBcJ_G0035095.1 mouse_genomes_project 9 87685111 87717598 - MGP_BALBcJ_P0093615 Tbc1d2b protein_coding protein_coding MGP_BALBcJ_T0093616.1 MGP_BALBcJ_G0035095.1 mouse_genomes_project 9 87687998 87702790 - Tbc1d2b protein_coding processed_transcript MGP_BALBcJ_T0093357.1 MGP_BALBcJ_G0035044.1 mouse_genomes_project 9 77171913 77176526 - MGP_BALBcJ_P0093357 Cox7a2 protein_coding protein_coding MGP_BALBcJ_T0094026.1 MGP_BALBcJ_G0035184.1 mouse_genomes_project 9 102708131 102710555 - MGP_BALBcJ_P0094026 Nudt16 protein_coding protein_coding MGP_BALBcJ_T0094027.1 MGP_BALBcJ_G0035184.1 mouse_genomes_project 9 102708560 102711048 - MGP_BALBcJ_P0094027 Nudt16 protein_coding protein_coding MGP_BALBcJ_T0094028.1 MGP_BALBcJ_G0035184.1 mouse_genomes_project 9 102708915 102711023 - Nudt16 protein_coding retained_intron MGP_BALBcJ_T0094029.1 MGP_BALBcJ_G0035184.1 mouse_genomes_project 9 102708915 102711023 - Nudt16 protein_coding retained_intron MGP_BALBcJ_T0094030.1 MGP_BALBcJ_G0035184.1 mouse_genomes_project 9 102709449 102711016 - MGP_BALBcJ_P0094030 Nudt16 protein_coding protein_coding MGP_BALBcJ_T0092385.1 MGP_BALBcJ_G0034791.1 mouse_genomes_project 9 51002532 51003012 + MGP_BALBcJ_P0092385 Gm16380 protein_coding protein_coding MGP_BALBcJ_T0002445.1 MGP_BALBcJ_G0002354.1 mouse_genomes_project 9 102650575 102653854 + TEC TEC MGP_BALBcJ_T0093633.1 MGP_BALBcJ_G0035099.1 mouse_genomes_project 9 89662324 89679242 + MGP_BALBcJ_P0093633 Plscr5 protein_coding protein_coding MGP_BALBcJ_T0091221.1 MGP_BALBcJ_G0034329.1 mouse_genomes_project 9 11537022 11547594 + MGP_BALBcJ_P0091221 Gpr83 protein_coding protein_coding MGP_BALBcJ_T0091222.1 MGP_BALBcJ_G0034329.1 mouse_genomes_project 9 11537066 11547115 + MGP_BALBcJ_P0091222 Gpr83 protein_coding protein_coding MGP_BALBcJ_T0091223.1 MGP_BALBcJ_G0034329.1 mouse_genomes_project 9 11542144 11547594 + Gpr83 protein_coding retained_intron MGP_BALBcJ_T0092481.1 MGP_BALBcJ_G0034821.1 mouse_genomes_project 9 53268616 53294175 - MGP_BALBcJ_P0092481 Tspan3 protein_coding protein_coding MGP_BALBcJ_T0011064.1 MGP_BALBcJ_G0009189.1 mouse_genomes_project 9 87239830 87239899 - Mir184 miRNA miRNA MGP_BALBcJ_T0002430.1 MGP_BALBcJ_G0002339.1 mouse_genomes_project 9 98720432 98723128 - TEC TEC MGP_BALBcJ_T0093253.1 MGP_BALBcJ_G0035013.1 mouse_genomes_project 9 72780185 72805434 + MGP_BALBcJ_P0093253 Leo1 protein_coding protein_coding MGP_BALBcJ_T0094033.1 MGP_BALBcJ_G0035186.1 mouse_genomes_project 9 102736599 102961600 - MGP_BALBcJ_P0094033 Nek11 protein_coding protein_coding MGP_BALBcJ_T0094034.1 MGP_BALBcJ_G0035186.1 mouse_genomes_project 9 102737757 102959107 - MGP_BALBcJ_P0094034 Nek11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094035.1 MGP_BALBcJ_G0035186.1 mouse_genomes_project 9 102818646 102961363 - MGP_BALBcJ_P0094035 Nek11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094036.1 MGP_BALBcJ_G0035186.1 mouse_genomes_project 9 102872233 102961334 - MGP_BALBcJ_P0094036 Nek11 protein_coding protein_coding MGP_BALBcJ_T0091647.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32052071 32067776 - MGP_BALBcJ_P0091647 Tirap protein_coding protein_coding MGP_BALBcJ_T0091648.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32054302 32067473 - MGP_BALBcJ_P0091648 Tirap protein_coding protein_coding MGP_BALBcJ_T0091649.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32054302 32067413 - MGP_BALBcJ_P0091649 Tirap protein_coding protein_coding MGP_BALBcJ_T0091650.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32054864 32067455 - MGP_BALBcJ_P0091650 Tirap protein_coding protein_coding MGP_BALBcJ_T0091651.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32056257 32067368 - MGP_BALBcJ_P0091651 Tirap protein_coding protein_coding MGP_BALBcJ_T0091652.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32056554 32058929 - MGP_BALBcJ_P0091652 Tirap protein_coding protein_coding MGP_BALBcJ_T0091653.1 MGP_BALBcJ_G0034499.1 mouse_genomes_project 9 32058565 32066984 - MGP_BALBcJ_P0091653 Tirap protein_coding protein_coding MGP_BALBcJ_T0095341.1 MGP_BALBcJ_G0035443.1 mouse_genomes_project 9 121041206 121049159 + MGP_BALBcJ_P0095341 Zfp105 protein_coding protein_coding MGP_BALBcJ_T0095342.1 MGP_BALBcJ_G0035443.1 mouse_genomes_project 9 121041233 121047809 + MGP_BALBcJ_P0095342 Zfp105 protein_coding protein_coding MGP_BALBcJ_T0091210.1 MGP_BALBcJ_G0034326.1 mouse_genomes_project 9 11429842 11434584 - MGP_BALBcJ_P0091210 1700012B09Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091211.1 MGP_BALBcJ_G0034326.1 mouse_genomes_project 9 11429848 11443916 - MGP_BALBcJ_P0091211 1700012B09Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091212.1 MGP_BALBcJ_G0034326.1 mouse_genomes_project 9 11429850 11434540 - MGP_BALBcJ_P0091212 1700012B09Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091213.1 MGP_BALBcJ_G0034326.1 mouse_genomes_project 9 11431541 11443933 - MGP_BALBcJ_P0091213 1700012B09Rik protein_coding protein_coding MGP_BALBcJ_T0091214.1 MGP_BALBcJ_G0034326.1 mouse_genomes_project 9 11431541 11443916 - MGP_BALBcJ_P0091214 1700012B09Rik protein_coding protein_coding MGP_BALBcJ_T0095417.1 MGP_BALBcJ_G0035468.1 mouse_genomes_project 9 122441867 122462788 - MGP_BALBcJ_P0095417 2010315B03Rik protein_coding protein_coding MGP_BALBcJ_T0095418.1 MGP_BALBcJ_G0035468.1 mouse_genomes_project 9 122443704 122462734 - MGP_BALBcJ_P0095418 2010315B03Rik protein_coding protein_coding MGP_BALBcJ_T0095419.1 MGP_BALBcJ_G0035468.1 mouse_genomes_project 9 122443894 122461991 - MGP_BALBcJ_P0095419 2010315B03Rik protein_coding protein_coding MGP_BALBcJ_T0095420.1 MGP_BALBcJ_G0035468.1 mouse_genomes_project 9 122443906 122462763 - MGP_BALBcJ_P0095420 2010315B03Rik protein_coding protein_coding MGP_BALBcJ_T0095421.1 MGP_BALBcJ_G0035468.1 mouse_genomes_project 9 122450155 122462763 - 2010315B03Rik protein_coding processed_transcript MGP_BALBcJ_T0005488.1 MGP_BALBcJ_G0004634.1 mouse_genomes_project 9 95490069 95498812 + 4921534H16Rik antisense antisense MGP_BALBcJ_T0005489.1 MGP_BALBcJ_G0004634.1 mouse_genomes_project 9 95490069 95492419 + 4921534H16Rik antisense antisense MGP_BALBcJ_T0093379.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77590528 77738728 + MGP_BALBcJ_P0093379 Myo6 protein_coding protein_coding MGP_BALBcJ_T0093380.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77590535 77593546 + Myo6 protein_coding retained_intron MGP_BALBcJ_T0093381.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77590537 77738727 + MGP_BALBcJ_P0093381 Myo6 protein_coding protein_coding MGP_BALBcJ_T0093382.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77590724 77735094 + MGP_BALBcJ_P0093382 Myo6 protein_coding protein_coding MGP_BALBcJ_T0093383.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77642583 77735047 + MGP_BALBcJ_P0093383 Myo6 protein_coding protein_coding MGP_BALBcJ_T0093384.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77642601 77738728 + MGP_BALBcJ_P0093384 Myo6 protein_coding protein_coding MGP_BALBcJ_T0093385.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77642609 77738728 + MGP_BALBcJ_P0093385 Myo6 protein_coding protein_coding MGP_BALBcJ_T0093386.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77688910 77693513 + Myo6 protein_coding retained_intron MGP_BALBcJ_T0093387.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77712250 77713345 + Myo6 protein_coding retained_intron MGP_BALBcJ_T0093388.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77713117 77719447 + Myo6 protein_coding retained_intron MGP_BALBcJ_T0093389.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77732761 77734792 + Myo6 protein_coding processed_transcript MGP_BALBcJ_T0093390.1 MGP_BALBcJ_G0035048.1 mouse_genomes_project 9 77733910 77735600 + Myo6 protein_coding retained_intron MGP_BALBcJ_T0098412.1 MGP_BALBcJ_G0036466.1 mouse_genomes_project 9 35433416 35434349 + pseudogene pseudogene MGP_BALBcJ_T0091149.1 MGP_BALBcJ_G0034305.1 mouse_genomes_project 9 4790082 4865506 - MGP_BALBcJ_P0091149 Cep126 protein_coding protein_coding MGP_BALBcJ_T0091289.1 MGP_BALBcJ_G0034356.1 mouse_genomes_project 9 15724336 15725275 + MGP_BALBcJ_P0091289 Olfr834 protein_coding protein_coding MGP_BALBcJ_T0093511.1 MGP_BALBcJ_G0035071.1 mouse_genomes_project 9 84455314 84500113 + protein_coding processed_transcript MGP_BALBcJ_T0093512.1 MGP_BALBcJ_G0035071.1 mouse_genomes_project 9 84455406 84482227 + MGP_BALBcJ_P0093512 protein_coding unknown_likely_coding MGP_BALBcJ_T0093513.1 MGP_BALBcJ_G0035071.1 mouse_genomes_project 9 84462722 84480652 + protein_coding retained_intron MGP_BALBcJ_T0093514.1 MGP_BALBcJ_G0035071.1 mouse_genomes_project 9 84488836 84504761 + MGP_BALBcJ_P0093514 protein_coding unknown_likely_coding MGP_BALBcJ_T0093046.1 MGP_BALBcJ_G0034972.1 mouse_genomes_project 9 67754825 67769111 - MGP_BALBcJ_P0093046 Ccnb2 protein_coding protein_coding MGP_BALBcJ_T0098409.1 MGP_BALBcJ_G0036463.1 mouse_genomes_project 9 15713408 15713677 - pseudogene pseudogene MGP_BALBcJ_T0009203.1 MGP_BALBcJ_G0007395.1 mouse_genomes_project 9 32784256 32786970 + lincRNA lincRNA MGP_BALBcJ_T0009204.1 MGP_BALBcJ_G0007395.1 mouse_genomes_project 9 32784814 32785368 + lincRNA lincRNA MGP_BALBcJ_T0091205.1 MGP_BALBcJ_G0034324.1 mouse_genomes_project 9 11369038 11377779 - MGP_BALBcJ_P0091205 Piwil4 protein_coding protein_coding MGP_BALBcJ_T0091206.1 MGP_BALBcJ_G0034324.1 mouse_genomes_project 9 11374486 11413626 - MGP_BALBcJ_P0091206 Piwil4 protein_coding protein_coding MGP_BALBcJ_T0091207.1 MGP_BALBcJ_G0034324.1 mouse_genomes_project 9 11374487 11391357 - MGP_BALBcJ_P0091207 Piwil4 protein_coding protein_coding MGP_BALBcJ_T0091208.1 MGP_BALBcJ_G0034324.1 mouse_genomes_project 9 11375066 11413638 - MGP_BALBcJ_P0091208 Piwil4 protein_coding protein_coding MGP_BALBcJ_T0016100.1 MGP_BALBcJ_G0014197.1 mouse_genomes_project 9 95781477 95782054 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093821.1 MGP_BALBcJ_G0035144.1 mouse_genomes_project 9 96972174 97068491 - MGP_BALBcJ_P0093821 Armc8 protein_coding protein_coding MGP_BALBcJ_T0093822.1 MGP_BALBcJ_G0035144.1 mouse_genomes_project 9 97012728 97068238 - MGP_BALBcJ_P0093822 Armc8 protein_coding protein_coding MGP_BALBcJ_T0093823.1 MGP_BALBcJ_G0035144.1 mouse_genomes_project 9 97050903 97068255 - Armc8 protein_coding retained_intron MGP_BALBcJ_T0093051.1 MGP_BALBcJ_G0034975.1 mouse_genomes_project 9 67945276 68003179 - MGP_BALBcJ_P0093051 Fam63b protein_coding protein_coding MGP_BALBcJ_T0002441.1 MGP_BALBcJ_G0002350.1 mouse_genomes_project 9 101153117 101154705 - TEC TEC MGP_BALBcJ_T0100204.1 MGP_BALBcJ_G0038240.1 mouse_genomes_project 9 69980126 69980233 + Gm23057 snRNA snRNA MGP_BALBcJ_T0091703.1 MGP_BALBcJ_G0034514.1 mouse_genomes_project 9 32634626 32636212 - MGP_BALBcJ_P0091703 Gm17727 protein_coding protein_coding MGP_BALBcJ_T0099032.1 MGP_BALBcJ_G0037073.1 mouse_genomes_project 9 99696077 99698555 - Gm29388 sense_intronic sense_intronic MGP_BALBcJ_T0092638.1 MGP_BALBcJ_G0034869.1 mouse_genomes_project 9 56063730 56226713 - MGP_BALBcJ_P0092638 Neo1 protein_coding protein_coding MGP_BALBcJ_T0092639.1 MGP_BALBcJ_G0034869.1 mouse_genomes_project 9 56066325 56226428 - MGP_BALBcJ_P0092639 Neo1 protein_coding unknown_likely_coding MGP_BALBcJ_T0091075.1 MGP_BALBcJ_G0034280.1 mouse_genomes_project 9 982803 1004778 + MGP_BALBcJ_P0091075 Kbtbd3 protein_coding protein_coding MGP_BALBcJ_T0092867.1 MGP_BALBcJ_G0034935.1 mouse_genomes_project 9 62817260 62842421 - MGP_BALBcJ_P0092867 Plekho2 protein_coding protein_coding MGP_BALBcJ_T0016055.1 MGP_BALBcJ_G0014152.1 mouse_genomes_project 9 77494481 77494809 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018462.1 MGP_BALBcJ_G0015670.1 mouse_genomes_project 9 18003300 18004313 + Gm16754 processed_transcript retained_intron MGP_BALBcJ_T0018463.1 MGP_BALBcJ_G0015670.1 mouse_genomes_project 9 18003300 18010480 + Gm16754 processed_transcript antisense MGP_BALBcJ_T0018464.1 MGP_BALBcJ_G0015670.1 mouse_genomes_project 9 18003332 18010887 + Gm16754 processed_transcript antisense MGP_BALBcJ_T0009245.1 MGP_BALBcJ_G0007427.1 mouse_genomes_project 9 69860357 69874901 - 4930509E16Rik lincRNA lincRNA MGP_BALBcJ_T0093830.1 MGP_BALBcJ_G0035146.1 mouse_genomes_project 9 97114793 97125160 + MGP_BALBcJ_P0093830 A4gnt protein_coding protein_coding MGP_BALBcJ_T0093645.1 MGP_BALBcJ_G0035103.1 mouse_genomes_project 9 89917284 89952458 + MGP_BALBcJ_P0093645 Plscr4 protein_coding protein_coding MGP_BALBcJ_T0093646.1 MGP_BALBcJ_G0035103.1 mouse_genomes_project 9 89917305 89945114 + Plscr4 protein_coding retained_intron MGP_BALBcJ_T0100205.1 MGP_BALBcJ_G0038241.1 mouse_genomes_project 9 70324258 70324365 + Gm23567 snRNA snRNA MGP_BALBcJ_T0016000.1 MGP_BALBcJ_G0014097.1 mouse_genomes_project 9 30808858 30809090 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095405.1 MGP_BALBcJ_G0035464.1 mouse_genomes_project 9 122112017 122113477 - MGP_BALBcJ_P0095405 Ccr1l1 protein_coding protein_coding MGP_BALBcJ_T0093548.1 MGP_BALBcJ_G0035079.1 mouse_genomes_project 9 85924336 85951672 + MGP_BALBcJ_P0093548 Zfp949 protein_coding protein_coding MGP_BALBcJ_T0093549.1 MGP_BALBcJ_G0035079.1 mouse_genomes_project 9 85924360 85943730 + MGP_BALBcJ_P0093549 Zfp949 protein_coding protein_coding MGP_BALBcJ_T0093550.1 MGP_BALBcJ_G0035079.1 mouse_genomes_project 9 85924401 85944627 + Zfp949 protein_coding retained_intron MGP_BALBcJ_T0093551.1 MGP_BALBcJ_G0035079.1 mouse_genomes_project 9 85924416 85930899 + MGP_BALBcJ_P0093551 Zfp949 protein_coding protein_coding MGP_BALBcJ_T0093552.1 MGP_BALBcJ_G0035079.1 mouse_genomes_project 9 85924499 85951672 + MGP_BALBcJ_P0093552 Zfp949 protein_coding protein_coding MGP_BALBcJ_T0093576.1 MGP_BALBcJ_G0035089.1 mouse_genomes_project 9 87134577 87140438 - MGP_BALBcJ_P0093576 Tmed3 protein_coding protein_coding MGP_BALBcJ_T0093577.1 MGP_BALBcJ_G0035089.1 mouse_genomes_project 9 87138615 87140193 - Tmed3 protein_coding retained_intron MGP_BALBcJ_T0093850.1 MGP_BALBcJ_G0035151.1 mouse_genomes_project 9 98014687 98066653 - MGP_BALBcJ_P0093850 Nck1 protein_coding protein_coding MGP_BALBcJ_T0093851.1 MGP_BALBcJ_G0035151.1 mouse_genomes_project 9 98017395 98029167 - MGP_BALBcJ_P0093851 Nck1 protein_coding protein_coding MGP_BALBcJ_T0093852.1 MGP_BALBcJ_G0035151.1 mouse_genomes_project 9 98019973 98066641 - MGP_BALBcJ_P0093852 Nck1 protein_coding protein_coding MGP_BALBcJ_T0093853.1 MGP_BALBcJ_G0035151.1 mouse_genomes_project 9 98020196 98066250 - MGP_BALBcJ_P0093853 Nck1 protein_coding protein_coding MGP_BALBcJ_T0011076.1 MGP_BALBcJ_G0009201.1 mouse_genomes_project 9 106180015 106180089 + Mir191 miRNA miRNA MGP_BALBcJ_T0092876.1 MGP_BALBcJ_G0034937.1 mouse_genomes_project 9 62894146 62925859 + MGP_BALBcJ_P0092876 Rbpms2 protein_coding protein_coding MGP_BALBcJ_T0092877.1 MGP_BALBcJ_G0034937.1 mouse_genomes_project 9 62895424 62925836 + MGP_BALBcJ_P0092877 Rbpms2 protein_coding protein_coding MGP_BALBcJ_T0092878.1 MGP_BALBcJ_G0034937.1 mouse_genomes_project 9 62895567 62923740 + MGP_BALBcJ_P0092878 Rbpms2 protein_coding unknown_likely_coding MGP_BALBcJ_T0016037.1 MGP_BALBcJ_G0014134.1 mouse_genomes_project 9 70413637 70413944 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093566.1 MGP_BALBcJ_G0035084.1 mouse_genomes_project 9 86238164 86263230 + MGP_BALBcJ_P0093566 protein_coding protein_coding MGP_BALBcJ_T0093567.1 MGP_BALBcJ_G0035084.1 mouse_genomes_project 9 86238309 86262852 + MGP_BALBcJ_P0093567 protein_coding protein_coding MGP_BALBcJ_T0005396.1 MGP_BALBcJ_G0004573.1 mouse_genomes_project 9 17865771 17904163 + 1700084C06Rik antisense antisense MGP_BALBcJ_T0093255.1 MGP_BALBcJ_G0035015.1 mouse_genomes_project 9 72905768 72952005 - MGP_BALBcJ_P0093255 Tmod2 protein_coding protein_coding MGP_BALBcJ_T0093256.1 MGP_BALBcJ_G0035015.1 mouse_genomes_project 9 72905768 72939510 - MGP_BALBcJ_P0093256 Tmod2 protein_coding protein_coding MGP_BALBcJ_T0093257.1 MGP_BALBcJ_G0035015.1 mouse_genomes_project 9 72913853 72938028 - MGP_BALBcJ_P0093257 Tmod2 protein_coding protein_coding MGP_BALBcJ_T0093050.1 MGP_BALBcJ_G0034974.1 mouse_genomes_project 9 67887747 67938499 + MGP_BALBcJ_P0093050 Sltm protein_coding protein_coding MGP_BALBcJ_T0016093.1 MGP_BALBcJ_G0014190.1 mouse_genomes_project 9 93739220 93739461 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005503.1 MGP_BALBcJ_G0004646.1 mouse_genomes_project 9 104034276 104035014 - Gm28959 antisense antisense MGP_BALBcJ_T0095325.1 MGP_BALBcJ_G0035436.1 mouse_genomes_project 9 120296617 120425251 - MGP_BALBcJ_P0095325 Ano10 protein_coding protein_coding MGP_BALBcJ_T0092138.1 MGP_BALBcJ_G0034713.1 mouse_genomes_project 9 42906460 42932211 + MGP_BALBcJ_P0092138 Bace1 protein_coding protein_coding MGP_BALBcJ_T0092139.1 MGP_BALBcJ_G0034713.1 mouse_genomes_project 9 42906460 42930318 + MGP_BALBcJ_P0092139 Bace1 protein_coding protein_coding MGP_BALBcJ_T0092140.1 MGP_BALBcJ_G0034713.1 mouse_genomes_project 9 42907120 42925022 + MGP_BALBcJ_P0092140 Bace1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092141.1 MGP_BALBcJ_G0034713.1 mouse_genomes_project 9 42907800 42922564 + Bace1 protein_coding processed_transcript MGP_BALBcJ_T0092142.1 MGP_BALBcJ_G0034713.1 mouse_genomes_project 9 42920579 42930059 + Bace1 protein_coding retained_intron MGP_BALBcJ_T0092143.1 MGP_BALBcJ_G0034713.1 mouse_genomes_project 9 42922483 42928202 + MGP_BALBcJ_P0092143 Bace1 protein_coding protein_coding MGP_BALBcJ_T0091382.1 MGP_BALBcJ_G0034401.1 mouse_genomes_project 9 17675241 17725149 - MGP_BALBcJ_P0091382 Dnmt1 protein_coding protein_coding MGP_BALBcJ_T0093171.1 MGP_BALBcJ_G0034995.1 mouse_genomes_project 9 70331433 70337421 - MGP_BALBcJ_P0093171 Ccpg1os protein_coding protein_coding MGP_BALBcJ_T0093172.1 MGP_BALBcJ_G0034995.1 mouse_genomes_project 9 70335517 70337427 - Ccpg1os protein_coding retained_intron MGP_BALBcJ_T0009248.1 MGP_BALBcJ_G0007430.1 mouse_genomes_project 9 71912197 71913097 - Gm28622 lincRNA lincRNA MGP_BALBcJ_T0005391.1 MGP_BALBcJ_G0004571.1 mouse_genomes_project 9 11377350 11391942 + Gm10706 antisense antisense MGP_BALBcJ_T0091834.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35652988 35677986 + MGP_BALBcJ_P0091834 Vwa5a protein_coding protein_coding MGP_BALBcJ_T0091835.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35652992 35677411 + MGP_BALBcJ_P0091835 Vwa5a protein_coding protein_coding MGP_BALBcJ_T0091836.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35653758 35657337 + MGP_BALBcJ_P0091836 Vwa5a protein_coding protein_coding MGP_BALBcJ_T0091837.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35663163 35669368 + Vwa5a protein_coding retained_intron MGP_BALBcJ_T0091838.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35669159 35670795 + Vwa5a protein_coding retained_intron MGP_BALBcJ_T0091839.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35670635 35672639 + Vwa5a protein_coding retained_intron MGP_BALBcJ_T0091840.1 MGP_BALBcJ_G0034582.1 mouse_genomes_project 9 35670833 35676569 + MGP_BALBcJ_P0091840 Vwa5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091800.1 MGP_BALBcJ_G0034549.1 mouse_genomes_project 9 34905623 34906571 + MGP_BALBcJ_P0091800 Olfr881 protein_coding protein_coding MGP_BALBcJ_T0101459.1 MGP_BALBcJ_G0039495.1 mouse_genomes_project 9 36506306 36506433 - Gm24278 snoRNA snoRNA MGP_BALBcJ_T0091313.1 MGP_BALBcJ_G0034380.1 mouse_genomes_project 9 16899721 16908681 + MGP_BALBcJ_P0091313 Olfr869 protein_coding protein_coding MGP_BALBcJ_T0011720.1 MGP_BALBcJ_G0009845.1 mouse_genomes_project 9 74157138 74157431 - Gm23791 misc_RNA misc_RNA MGP_BALBcJ_T0091417.1 MGP_BALBcJ_G0034419.1 mouse_genomes_project 9 18098546 18133436 + MGP_BALBcJ_P0091417 Slc44a2 protein_coding unknown_likely_coding MGP_BALBcJ_T0091418.1 MGP_BALBcJ_G0034419.1 mouse_genomes_project 9 18116251 18133429 + MGP_BALBcJ_P0091418 Slc44a2 protein_coding protein_coding MGP_BALBcJ_T0005458.1 MGP_BALBcJ_G0004616.1 mouse_genomes_project 9 76070467 76071220 - 4921509A06Rik antisense antisense MGP_BALBcJ_T0092641.1 MGP_BALBcJ_G0034871.1 mouse_genomes_project 9 56509049 56541656 - MGP_BALBcJ_P0092641 Bbs4 protein_coding protein_coding MGP_BALBcJ_T0100219.1 MGP_BALBcJ_G0038255.1 mouse_genomes_project 9 99913381 99913484 + Gm22894 snRNA snRNA MGP_BALBcJ_T0093518.1 MGP_BALBcJ_G0035073.1 mouse_genomes_project 9 84607041 84674769 - MGP_BALBcJ_P0093518 Cep162 protein_coding protein_coding MGP_BALBcJ_T0093519.1 MGP_BALBcJ_G0035073.1 mouse_genomes_project 9 84621472 84626945 - Cep162 protein_coding processed_transcript MGP_BALBcJ_T0093520.1 MGP_BALBcJ_G0035073.1 mouse_genomes_project 9 84642487 84645652 - Cep162 protein_coding retained_intron MGP_BALBcJ_T0093521.1 MGP_BALBcJ_G0035073.1 mouse_genomes_project 9 84643245 84674521 - Cep162 protein_coding retained_intron MGP_BALBcJ_T0094370.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105310452 105340891 - MGP_BALBcJ_P0094370 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094371.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105310577 105340876 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094372.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105310578 105330345 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094373.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105310582 105340882 - MGP_BALBcJ_P0094373 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094374.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105310582 105340875 - MGP_BALBcJ_P0094374 Rbm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094375.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105312055 105314374 - MGP_BALBcJ_P0094375 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094376.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105313420 105314322 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094377.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105314356 105320104 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094378.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105315281 105319993 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094379.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105316130 105340846 - MGP_BALBcJ_P0094379 Rbm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094380.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105316231 105321995 - MGP_BALBcJ_P0094380 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094381.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105320374 105322047 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094382.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105320581 105323931 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094383.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105321965 105324443 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094384.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105321994 105337492 - MGP_BALBcJ_P0094384 Rbm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094385.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105323935 105340867 - MGP_BALBcJ_P0094385 Rbm5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094386.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105323939 105327012 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094387.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105323963 105340390 - MGP_BALBcJ_P0094387 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094388.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105328231 105340854 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094389.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105330100 105340854 - MGP_BALBcJ_P0094389 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094390.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105330165 105340840 - MGP_BALBcJ_P0094390 Rbm5 protein_coding protein_coding MGP_BALBcJ_T0094391.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105334988 105340884 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094392.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105336501 105340881 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0094393.1 MGP_BALBcJ_G0035242.1 mouse_genomes_project 9 105339079 105340854 - Rbm5 protein_coding retained_intron MGP_BALBcJ_T0101488.1 MGP_BALBcJ_G0039524.1 mouse_genomes_project 9 84135134 84135262 + Gm22138 snoRNA snoRNA MGP_BALBcJ_T0092854.1 MGP_BALBcJ_G0034928.1 mouse_genomes_project 9 62620437 62640141 + MGP_BALBcJ_P0092854 Ubap1l protein_coding protein_coding MGP_BALBcJ_T0091966.1 MGP_BALBcJ_G0034657.1 mouse_genomes_project 9 40754575 40817676 + MGP_BALBcJ_P0091966 Nectin1 protein_coding protein_coding MGP_BALBcJ_T0093892.1 MGP_BALBcJ_G0035159.1 mouse_genomes_project 9 100047904 100088317 + MGP_BALBcJ_P0093892 Ky protein_coding protein_coding MGP_BALBcJ_T0093893.1 MGP_BALBcJ_G0035159.1 mouse_genomes_project 9 100063414 100070138 + Ky protein_coding retained_intron MGP_BALBcJ_T0092767.1 MGP_BALBcJ_G0034903.1 mouse_genomes_project 9 60654665 60837457 - MGP_BALBcJ_P0092767 Iqch protein_coding protein_coding MGP_BALBcJ_T0092768.1 MGP_BALBcJ_G0034903.1 mouse_genomes_project 9 60654827 60837412 - MGP_BALBcJ_P0092768 Iqch protein_coding protein_coding MGP_BALBcJ_T0092769.1 MGP_BALBcJ_G0034903.1 mouse_genomes_project 9 60654827 60837412 - MGP_BALBcJ_P0092769 Iqch protein_coding protein_coding MGP_BALBcJ_T0092770.1 MGP_BALBcJ_G0034903.1 mouse_genomes_project 9 60654869 60837447 - MGP_BALBcJ_P0092770 Iqch protein_coding protein_coding MGP_BALBcJ_T0092771.1 MGP_BALBcJ_G0034903.1 mouse_genomes_project 9 60655042 60837381 - MGP_BALBcJ_P0092771 Iqch protein_coding protein_coding MGP_BALBcJ_T0092772.1 MGP_BALBcJ_G0034903.1 mouse_genomes_project 9 60820410 60837449 - Iqch protein_coding retained_intron MGP_BALBcJ_T0094742.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106614195 106630986 + MGP_BALBcJ_P0094742 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094743.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106614215 106630933 + MGP_BALBcJ_P0094743 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094744.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106614232 106630933 + Shisa5 protein_coding retained_intron MGP_BALBcJ_T0094745.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106616046 106629952 + MGP_BALBcJ_P0094745 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094746.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106616236 106624599 + MGP_BALBcJ_P0094746 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094747.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624304 106630164 + MGP_BALBcJ_P0094747 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094748.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624363 106629587 + MGP_BALBcJ_P0094748 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094749.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624367 106630233 + MGP_BALBcJ_P0094749 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094750.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624388 106629561 + MGP_BALBcJ_P0094750 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094751.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624406 106630222 + MGP_BALBcJ_P0094751 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094752.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624408 106629620 + MGP_BALBcJ_P0094752 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094753.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624410 106629940 + MGP_BALBcJ_P0094753 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094754.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624419 106629583 + MGP_BALBcJ_P0094754 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094755.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106624643 106630067 + MGP_BALBcJ_P0094755 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094756.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106626062 106629911 + Shisa5 protein_coding processed_transcript MGP_BALBcJ_T0094757.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106628071 106630416 + MGP_BALBcJ_P0094757 Shisa5 protein_coding protein_coding MGP_BALBcJ_T0094758.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106628156 106629760 + Shisa5 protein_coding processed_transcript MGP_BALBcJ_T0094759.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106628220 106629700 + Shisa5 protein_coding processed_transcript MGP_BALBcJ_T0094760.1 MGP_BALBcJ_G0035294.1 mouse_genomes_project 9 106629148 106629684 + Shisa5 protein_coding retained_intron MGP_BALBcJ_T0011089.1 MGP_BALBcJ_G0009214.1 mouse_genomes_project 9 120407145 120407284 - Mir8106 miRNA miRNA MGP_BALBcJ_T0091260.1 MGP_BALBcJ_G0034340.1 mouse_genomes_project 9 12410151 12442188 + MGP_BALBcJ_P0091260 Slc36a4 protein_coding protein_coding MGP_BALBcJ_T0091777.1 MGP_BALBcJ_G0034535.1 mouse_genomes_project 9 34371097 34406415 + MGP_BALBcJ_P0091777 Msantd2 protein_coding protein_coding MGP_BALBcJ_T0092731.1 MGP_BALBcJ_G0034892.1 mouse_genomes_project 9 59487703 59499138 - MGP_BALBcJ_P0092731 Spesp1 protein_coding protein_coding MGP_BALBcJ_T0016054.1 MGP_BALBcJ_G0014151.1 mouse_genomes_project 9 77256307 77256587 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016111.1 MGP_BALBcJ_G0014208.1 mouse_genomes_project 9 100093706 100095207 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093217.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371251 72396285 + MGP_BALBcJ_P0093217 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093218.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371251 72396266 + MGP_BALBcJ_P0093218 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093219.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371314 72372120 + Arpp19 protein_coding retained_intron MGP_BALBcJ_T0093220.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371314 72392809 + MGP_BALBcJ_P0093220 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093221.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371316 72393682 + MGP_BALBcJ_P0093221 Arpp19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093222.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371355 72396285 + MGP_BALBcJ_P0093222 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093223.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371386 72392864 + MGP_BALBcJ_P0093223 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093224.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371456 72392793 + MGP_BALBcJ_P0093224 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093225.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72371554 72392776 + MGP_BALBcJ_P0093225 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093226.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72387959 72393355 + MGP_BALBcJ_P0093226 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0093227.1 MGP_BALBcJ_G0035006.1 mouse_genomes_project 9 72388033 72394048 + MGP_BALBcJ_P0093227 Arpp19 protein_coding protein_coding MGP_BALBcJ_T0011041.1 MGP_BALBcJ_G0009166.1 mouse_genomes_project 9 43008432 43008502 - Mir7087 miRNA miRNA MGP_BALBcJ_T0002420.1 MGP_BALBcJ_G0002329.1 mouse_genomes_project 9 96809948 96810639 + TEC TEC MGP_BALBcJ_T0091166.1 MGP_BALBcJ_G0034313.1 mouse_genomes_project 9 9972004 10012966 + MGP_BALBcJ_P0091166 Ccdc82 protein_coding protein_coding MGP_BALBcJ_T0091167.1 MGP_BALBcJ_G0034313.1 mouse_genomes_project 9 9972017 9978575 + MGP_BALBcJ_P0091167 Ccdc82 protein_coding protein_coding MGP_BALBcJ_T0094315.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105164104 105171949 - MGP_BALBcJ_P0094315 Sema3b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094316.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105164647 105175658 - MGP_BALBcJ_P0094316 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094317.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105164783 105175628 - MGP_BALBcJ_P0094317 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094318.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105164784 105173086 - MGP_BALBcJ_P0094318 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094319.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105164785 105175622 - MGP_BALBcJ_P0094319 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094320.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105164785 105171830 - MGP_BALBcJ_P0094320 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094321.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105166238 105167742 - Sema3b protein_coding retained_intron MGP_BALBcJ_T0094322.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105168050 105168602 - Sema3b protein_coding retained_intron MGP_BALBcJ_T0094323.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105169587 105171697 - MGP_BALBcJ_P0094323 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094324.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105169742 105173346 - MGP_BALBcJ_P0094324 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094325.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105169774 105173113 - MGP_BALBcJ_P0094325 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094326.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105170594 105173111 - MGP_BALBcJ_P0094326 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094327.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105171474 105175649 - MGP_BALBcJ_P0094327 Sema3b protein_coding protein_coding MGP_BALBcJ_T0094328.1 MGP_BALBcJ_G0035237.1 mouse_genomes_project 9 105171518 105173615 - Sema3b protein_coding processed_transcript MGP_BALBcJ_T0016075.1 MGP_BALBcJ_G0014172.1 mouse_genomes_project 9 87668168 87668452 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095121.1 MGP_BALBcJ_G0035375.1 mouse_genomes_project 9 113903250 114047187 + MGP_BALBcJ_P0095121 Gadl1 protein_coding protein_coding MGP_BALBcJ_T0005511.1 MGP_BALBcJ_G0004652.1 mouse_genomes_project 9 105113823 105117002 - Gm34106 antisense antisense MGP_BALBcJ_T0005441.1 MGP_BALBcJ_G0004603.1 mouse_genomes_project 9 63850325 63860345 + Gm15563 antisense antisense MGP_BALBcJ_T0093935.1 MGP_BALBcJ_G0035167.1 mouse_genomes_project 9 100738346 100752631 - MGP_BALBcJ_P0093935 Srprb protein_coding protein_coding MGP_BALBcJ_T0093936.1 MGP_BALBcJ_G0035167.1 mouse_genomes_project 9 100739404 100752623 - Srprb protein_coding retained_intron MGP_BALBcJ_T0093938.1 MGP_BALBcJ_G0035167.1 mouse_genomes_project 9 100740666 100742577 - Srprb protein_coding processed_transcript MGP_BALBcJ_T0101510.1 MGP_BALBcJ_G0039546.1 mouse_genomes_project 9 118243235 118243438 + Gm26448 snoRNA snoRNA MGP_BALBcJ_T0005402.1 MGP_BALBcJ_G0004577.1 mouse_genomes_project 9 25901991 25912392 + Gm15520 antisense antisense MGP_BALBcJ_T0092965.1 MGP_BALBcJ_G0034957.1 mouse_genomes_project 9 64259759 64280324 - MGP_BALBcJ_P0092965 Lactb protein_coding protein_coding MGP_BALBcJ_T0091860.1 MGP_BALBcJ_G0034602.1 mouse_genomes_project 9 36277144 36278110 - MGP_BALBcJ_P0091860 Olfr948 protein_coding protein_coding MGP_BALBcJ_T0093810.1 MGP_BALBcJ_G0035142.1 mouse_genomes_project 9 96798253 96847609 - MGP_BALBcJ_P0093810 Esyt3 protein_coding protein_coding MGP_BALBcJ_T0093811.1 MGP_BALBcJ_G0035142.1 mouse_genomes_project 9 96806331 96809826 - Esyt3 protein_coding retained_intron MGP_BALBcJ_T0093812.1 MGP_BALBcJ_G0035142.1 mouse_genomes_project 9 96806375 96812133 - MGP_BALBcJ_P0093812 Esyt3 protein_coding protein_coding MGP_BALBcJ_T0093813.1 MGP_BALBcJ_G0035142.1 mouse_genomes_project 9 96821905 96828000 - Esyt3 protein_coding retained_intron MGP_BALBcJ_T0093814.1 MGP_BALBcJ_G0035142.1 mouse_genomes_project 9 96844688 96847648 - Esyt3 protein_coding retained_intron MGP_BALBcJ_T0095221.1 MGP_BALBcJ_G0035405.1 mouse_genomes_project 9 118117364 118127199 - MGP_BALBcJ_P0095221 Xirp1 protein_coding protein_coding MGP_BALBcJ_T0100186.1 MGP_BALBcJ_G0038222.1 mouse_genomes_project 9 48017644 48017750 + Gm25558 snRNA snRNA MGP_BALBcJ_T0011724.1 MGP_BALBcJ_G0009849.1 mouse_genomes_project 9 96178401 96178508 - Gm27919 misc_RNA misc_RNA MGP_BALBcJ_T0016063.1 MGP_BALBcJ_G0014160.1 mouse_genomes_project 9 82393159 82395970 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093937.1 MGP_BALBcJ_G0035168.1 mouse_genomes_project 9 100740473 100780817 - MGP_BALBcJ_P0093937 Gm20425 protein_coding protein_coding MGP_BALBcJ_T0100173.1 MGP_BALBcJ_G0038209.1 mouse_genomes_project 9 19566620 19566705 - Gm27639 snRNA snRNA MGP_BALBcJ_T0011719.1 MGP_BALBcJ_G0009844.1 mouse_genomes_project 9 59236923 59237016 + Gm23221 misc_RNA misc_RNA MGP_BALBcJ_T0092807.1 MGP_BALBcJ_G0034912.1 mouse_genomes_project 9 61476525 61478663 + MGP_BALBcJ_P0092807 Uchl4 protein_coding protein_coding MGP_BALBcJ_T0091281.1 MGP_BALBcJ_G0034348.1 mouse_genomes_project 9 15204354 15211652 + MGP_BALBcJ_P0091281 Mbd3l1 protein_coding protein_coding MGP_BALBcJ_T0011012.1 MGP_BALBcJ_G0009137.1 mouse_genomes_project 9 1044712 1044779 - Gm23992 miRNA miRNA MGP_BALBcJ_T0093447.1 MGP_BALBcJ_G0035059.1 mouse_genomes_project 9 81350034 81548119 + MGP_BALBcJ_P0093447 Bckdhb protein_coding protein_coding MGP_BALBcJ_T0093448.1 MGP_BALBcJ_G0035059.1 mouse_genomes_project 9 81350059 81492455 + MGP_BALBcJ_P0093448 Bckdhb protein_coding protein_coding MGP_BALBcJ_T0093449.1 MGP_BALBcJ_G0035059.1 mouse_genomes_project 9 81367194 81548120 + MGP_BALBcJ_P0093449 Bckdhb protein_coding protein_coding MGP_BALBcJ_T0093450.1 MGP_BALBcJ_G0035059.1 mouse_genomes_project 9 81454921 81548078 + Bckdhb protein_coding processed_transcript MGP_BALBcJ_T0093451.1 MGP_BALBcJ_G0035059.1 mouse_genomes_project 9 81469002 81548119 + Bckdhb protein_coding processed_transcript MGP_BALBcJ_T0093452.1 MGP_BALBcJ_G0035059.1 mouse_genomes_project 9 81531370 81548120 + Bckdhb protein_coding processed_transcript MGP_BALBcJ_T0091627.1 MGP_BALBcJ_G0034494.1 mouse_genomes_project 9 29288219 29408024 - MGP_BALBcJ_P0091627 Fli1 protein_coding protein_coding MGP_BALBcJ_T0091628.1 MGP_BALBcJ_G0034494.1 mouse_genomes_project 9 29294074 29409290 - MGP_BALBcJ_P0091628 Fli1 protein_coding protein_coding MGP_BALBcJ_T0009271.1 MGP_BALBcJ_G0007448.1 mouse_genomes_project 9 87535846 87537554 + Gm26882 lincRNA lincRNA MGP_BALBcJ_T0093485.1 MGP_BALBcJ_G0035065.1 mouse_genomes_project 9 83975372 83996147 - MGP_BALBcJ_P0093485 Pgm3 protein_coding protein_coding MGP_BALBcJ_T0093486.1 MGP_BALBcJ_G0035065.1 mouse_genomes_project 9 83975996 83996148 - MGP_BALBcJ_P0093486 Pgm3 protein_coding protein_coding MGP_BALBcJ_T0093487.1 MGP_BALBcJ_G0035065.1 mouse_genomes_project 9 83976251 83978936 - Pgm3 protein_coding retained_intron MGP_BALBcJ_T0093488.1 MGP_BALBcJ_G0035065.1 mouse_genomes_project 9 83976676 83996113 - Pgm3 protein_coding retained_intron MGP_BALBcJ_T0093489.1 MGP_BALBcJ_G0035065.1 mouse_genomes_project 9 83977518 83996162 - Pgm3 protein_coding retained_intron MGP_BALBcJ_T0091710.1 MGP_BALBcJ_G0034520.1 mouse_genomes_project 9 33420937 33432913 - MGP_BALBcJ_P0091710 Gm5615 protein_coding protein_coding MGP_BALBcJ_T0016068.1 MGP_BALBcJ_G0014165.1 mouse_genomes_project 9 85163592 85164094 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101776.1 MGP_BALBcJ_G0039725.1 mouse_genomes_project 9 75868487 75870307 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101777.1 MGP_BALBcJ_G0039725.1 mouse_genomes_project 9 75868802 75870881 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101778.1 MGP_BALBcJ_G0039725.1 mouse_genomes_project 9 75869353 75871714 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0093259.1 MGP_BALBcJ_G0035017.1 mouse_genomes_project 9 72982994 73028130 - MGP_BALBcJ_P0093259 Scg3 protein_coding unknown_likely_coding MGP_BALBcJ_T0093260.1 MGP_BALBcJ_G0035017.1 mouse_genomes_project 9 72986615 73028046 - MGP_BALBcJ_P0093260 Scg3 protein_coding protein_coding MGP_BALBcJ_T0002386.1 MGP_BALBcJ_G0002296.1 mouse_genomes_project 9 79421103 79421707 + TEC TEC MGP_BALBcJ_T0002389.1 MGP_BALBcJ_G0002299.1 mouse_genomes_project 9 82756170 82758020 - TEC TEC MGP_BALBcJ_T0091311.1 MGP_BALBcJ_G0034378.1 mouse_genomes_project 9 16814758 16815754 - MGP_BALBcJ_P0091311 Olfr867 protein_coding protein_coding MGP_BALBcJ_T0094459.1 MGP_BALBcJ_G0035253.1 mouse_genomes_project 9 105572329 105646765 + Gm20662 protein_coding retained_intron MGP_BALBcJ_T0094464.1 MGP_BALBcJ_G0035253.1 mouse_genomes_project 9 105573969 105629131 + MGP_BALBcJ_P0094464 Gm20662 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094465.1 MGP_BALBcJ_G0035253.1 mouse_genomes_project 9 105574007 105629123 + MGP_BALBcJ_P0094465 Gm20662 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098416.1 MGP_BALBcJ_G0036470.1 mouse_genomes_project 9 107832618 107835797 + pseudogene pseudogene MGP_BALBcJ_T0091784.1 MGP_BALBcJ_G0034538.1 mouse_genomes_project 9 34426694 34435078 - MGP_BALBcJ_P0091784 Nrgn protein_coding protein_coding MGP_BALBcJ_T0091785.1 MGP_BALBcJ_G0034538.1 mouse_genomes_project 9 34427156 34428341 - Nrgn protein_coding processed_transcript MGP_BALBcJ_T0002371.1 MGP_BALBcJ_G0002281.1 mouse_genomes_project 9 70041258 70044760 + TEC TEC MGP_BALBcJ_T0098679.1 MGP_BALBcJ_G0036733.1 mouse_genomes_project 9 99672781 99672899 + n-R5s88 rRNA rRNA MGP_BALBcJ_T0091985.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41132882 41134825 + MGP_BALBcJ_P0091985 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091986.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41132891 41134823 + MGP_BALBcJ_P0091986 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091987.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41132911 41134822 + MGP_BALBcJ_P0091987 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091988.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41132946 41134131 + MGP_BALBcJ_P0091988 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091989.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41132951 41134822 + MGP_BALBcJ_P0091989 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091990.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41132958 41133545 + MGP_BALBcJ_P0091990 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091991.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41133012 41134410 + MGP_BALBcJ_P0091991 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0091992.1 MGP_BALBcJ_G0034663.1 mouse_genomes_project 9 41133152 41134182 + MGP_BALBcJ_P0091992 C1qtnf5 protein_coding protein_coding MGP_BALBcJ_T0100213.1 MGP_BALBcJ_G0038249.1 mouse_genomes_project 9 85901995 85902111 - Gm22985 snRNA snRNA MGP_BALBcJ_T0092343.1 MGP_BALBcJ_G0034775.1 mouse_genomes_project 9 48907867 48931928 + Arhgap20 protein_coding retained_intron MGP_BALBcJ_T0092344.1 MGP_BALBcJ_G0034775.1 mouse_genomes_project 9 48907875 48966654 + Arhgap20 protein_coding retained_intron MGP_BALBcJ_T0092345.1 MGP_BALBcJ_G0034775.1 mouse_genomes_project 9 48907882 48994800 + MGP_BALBcJ_P0092345 Arhgap20 protein_coding protein_coding MGP_BALBcJ_T0092346.1 MGP_BALBcJ_G0034775.1 mouse_genomes_project 9 48908106 48991343 + MGP_BALBcJ_P0092346 Arhgap20 protein_coding protein_coding MGP_BALBcJ_T0092347.1 MGP_BALBcJ_G0034775.1 mouse_genomes_project 9 48957577 48970368 + Arhgap20 protein_coding processed_transcript MGP_BALBcJ_T0092348.1 MGP_BALBcJ_G0034775.1 mouse_genomes_project 9 48972742 48989593 + Arhgap20 protein_coding processed_transcript MGP_BALBcJ_T0101465.1 MGP_BALBcJ_G0039501.1 mouse_genomes_project 9 41786756 41786891 - Gm24166 snoRNA snoRNA MGP_BALBcJ_T0002431.1 MGP_BALBcJ_G0002340.1 mouse_genomes_project 9 99443201 99448905 - TEC TEC MGP_BALBcJ_T0092069.1 MGP_BALBcJ_G0034689.1 mouse_genomes_project 9 41791507 41818114 - MGP_BALBcJ_P0092069 Arcn1 protein_coding protein_coding MGP_BALBcJ_T0092070.1 MGP_BALBcJ_G0034689.1 mouse_genomes_project 9 41805376 41818067 - Arcn1 protein_coding retained_intron MGP_BALBcJ_T0092071.1 MGP_BALBcJ_G0034689.1 mouse_genomes_project 9 41806293 41810360 - Arcn1 protein_coding processed_transcript MGP_BALBcJ_T0011058.1 MGP_BALBcJ_G0009183.1 mouse_genomes_project 9 66791647 66791735 + Mir3109 miRNA miRNA MGP_BALBcJ_T0091240.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004460 12045345 - MGP_BALBcJ_P0091240 Cep295 protein_coding protein_coding MGP_BALBcJ_T0091241.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004460 12020938 - MGP_BALBcJ_P0091241 Cep295 protein_coding protein_coding MGP_BALBcJ_T0091242.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004462 12021045 - Cep295 protein_coding retained_intron MGP_BALBcJ_T0091243.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004465 12028642 - Cep295 protein_coding retained_intron MGP_BALBcJ_T0091244.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004465 12045345 - MGP_BALBcJ_P0091244 Cep295 protein_coding protein_coding MGP_BALBcJ_T0091245.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004642 12042267 - MGP_BALBcJ_P0091245 Cep295 protein_coding protein_coding MGP_BALBcJ_T0091246.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12004818 12005503 - Cep295 protein_coding retained_intron MGP_BALBcJ_T0091247.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12010544 12013725 - MGP_BALBcJ_P0091247 Cep295 protein_coding protein_coding MGP_BALBcJ_T0091248.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12013087 12019524 - MGP_BALBcJ_P0091248 Cep295 protein_coding protein_coding MGP_BALBcJ_T0091249.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12013150 12014622 - Cep295 protein_coding retained_intron MGP_BALBcJ_T0091250.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12031029 12038461 - Cep295 protein_coding processed_transcript MGP_BALBcJ_T0091251.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12032218 12038991 - Cep295 protein_coding retained_intron MGP_BALBcJ_T0091252.1 MGP_BALBcJ_G0034337.1 mouse_genomes_project 9 12034140 12039372 - Cep295 protein_coding retained_intron MGP_BALBcJ_T0011715.1 MGP_BALBcJ_G0009840.1 mouse_genomes_project 9 18459844 18460028 + Gm27373 misc_RNA misc_RNA MGP_BALBcJ_T0093213.1 MGP_BALBcJ_G0035004.1 mouse_genomes_project 9 72194280 72223931 + MGP_BALBcJ_P0093213 Onecut1 protein_coding protein_coding MGP_BALBcJ_T0093214.1 MGP_BALBcJ_G0035004.1 mouse_genomes_project 9 72198830 72222510 + Onecut1 protein_coding processed_transcript MGP_BALBcJ_T0094188.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104231668 104259369 - MGP_BALBcJ_P0094188 Tex264 protein_coding protein_coding MGP_BALBcJ_T0094189.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104231668 104259228 - MGP_BALBcJ_P0094189 Tex264 protein_coding protein_coding MGP_BALBcJ_T0094190.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104231674 104259461 - MGP_BALBcJ_P0094190 Tex264 protein_coding protein_coding MGP_BALBcJ_T0094191.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104231914 104236908 - Tex264 protein_coding processed_transcript MGP_BALBcJ_T0094192.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104231970 104259465 - Tex264 protein_coding processed_transcript MGP_BALBcJ_T0094193.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104232159 104259473 - Tex264 protein_coding processed_transcript MGP_BALBcJ_T0094194.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104235320 104259455 - Tex264 protein_coding processed_transcript MGP_BALBcJ_T0094195.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104250947 104258851 - Tex264 protein_coding processed_transcript MGP_BALBcJ_T0094196.1 MGP_BALBcJ_G0035215.1 mouse_genomes_project 9 104258481 104259449 - Tex264 protein_coding processed_transcript MGP_BALBcJ_T0091201.1 MGP_BALBcJ_G0034323.1 mouse_genomes_project 9 11218748 11284532 - MGP_BALBcJ_P0091201 Amotl1 protein_coding protein_coding MGP_BALBcJ_T0091202.1 MGP_BALBcJ_G0034323.1 mouse_genomes_project 9 11226621 11230000 - Amotl1 protein_coding retained_intron MGP_BALBcJ_T0091203.1 MGP_BALBcJ_G0034323.1 mouse_genomes_project 9 11263299 11285233 - MGP_BALBcJ_P0091203 Amotl1 protein_coding protein_coding MGP_BALBcJ_T0091204.1 MGP_BALBcJ_G0034323.1 mouse_genomes_project 9 11263333 11284336 - MGP_BALBcJ_P0091204 Amotl1 protein_coding protein_coding MGP_BALBcJ_T0091833.1 MGP_BALBcJ_G0034581.1 mouse_genomes_project 9 35631341 35632289 - MGP_BALBcJ_P0091833 Olfr919 protein_coding protein_coding MGP_BALBcJ_T0091596.1 MGP_BALBcJ_G0034485.1 mouse_genomes_project 9 27917532 27961289 - MGP_BALBcJ_P0091596 protein_coding protein_coding MGP_BALBcJ_T0091597.1 MGP_BALBcJ_G0034485.1 mouse_genomes_project 9 27928239 27961232 - protein_coding retained_intron MGP_BALBcJ_T0091598.1 MGP_BALBcJ_G0034485.1 mouse_genomes_project 9 27928839 27931760 - protein_coding retained_intron MGP_BALBcJ_T0091599.1 MGP_BALBcJ_G0034485.1 mouse_genomes_project 9 27935638 27961232 - MGP_BALBcJ_P0091599 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011088.1 MGP_BALBcJ_G0009213.1 mouse_genomes_project 9 119089247 119089309 + Mir7090 miRNA miRNA MGP_BALBcJ_T0091138.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4646361 4725569 - MGP_BALBcJ_P0091138 Yap1 protein_coding protein_coding MGP_BALBcJ_T0091139.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4646361 4725577 - MGP_BALBcJ_P0091139 Yap1 protein_coding protein_coding MGP_BALBcJ_T0091140.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4648859 4725371 - MGP_BALBcJ_P0091140 Yap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091141.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4648859 4725371 - MGP_BALBcJ_P0091141 Yap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091142.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4648859 4722684 - MGP_BALBcJ_P0091142 Yap1 protein_coding protein_coding MGP_BALBcJ_T0091143.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4648859 4725371 - MGP_BALBcJ_P0091143 Yap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091144.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4677223 4680737 - Yap1 protein_coding processed_transcript MGP_BALBcJ_T0091145.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4688711 4724738 - Yap1 protein_coding processed_transcript MGP_BALBcJ_T0091146.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4688753 4724756 - Yap1 protein_coding processed_transcript MGP_BALBcJ_T0091147.1 MGP_BALBcJ_G0034303.1 mouse_genomes_project 9 4717888 4725577 - Yap1 protein_coding retained_intron MGP_BALBcJ_T0093838.1 MGP_BALBcJ_G0035148.1 mouse_genomes_project 9 97196874 97218001 - MGP_BALBcJ_P0093838 Cldn18 protein_coding protein_coding MGP_BALBcJ_T0093839.1 MGP_BALBcJ_G0035148.1 mouse_genomes_project 9 97199233 97225201 - MGP_BALBcJ_P0093839 Cldn18 protein_coding protein_coding MGP_BALBcJ_T0093840.1 MGP_BALBcJ_G0035148.1 mouse_genomes_project 9 97199595 97217947 - MGP_BALBcJ_P0093840 Cldn18 protein_coding protein_coding MGP_BALBcJ_T0093841.1 MGP_BALBcJ_G0035148.1 mouse_genomes_project 9 97200135 97225201 - MGP_BALBcJ_P0093841 Cldn18 protein_coding protein_coding MGP_BALBcJ_T0016082.1 MGP_BALBcJ_G0014179.1 mouse_genomes_project 9 89804224 89804752 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002397.1 MGP_BALBcJ_G0002306.1 mouse_genomes_project 9 85124022 85126822 + TEC TEC MGP_BALBcJ_T0091481.1 MGP_BALBcJ_G0034442.1 mouse_genomes_project 9 18789248 18800433 + MGP_BALBcJ_P0091481 Prkcsh protein_coding protein_coding MGP_BALBcJ_T0091482.1 MGP_BALBcJ_G0034442.1 mouse_genomes_project 9 18789248 18800433 + MGP_BALBcJ_P0091482 Prkcsh protein_coding protein_coding MGP_BALBcJ_T0009287.1 MGP_BALBcJ_G0007459.1 mouse_genomes_project 9 94520915 94547025 - Gm19325 lincRNA lincRNA MGP_BALBcJ_T0092924.1 MGP_BALBcJ_G0034947.1 mouse_genomes_project 9 63422271 63538288 + MGP_BALBcJ_P0092924 Dapk2 protein_coding protein_coding MGP_BALBcJ_T0092925.1 MGP_BALBcJ_G0034947.1 mouse_genomes_project 9 63422283 63487887 + Dapk2 protein_coding retained_intron MGP_BALBcJ_T0092926.1 MGP_BALBcJ_G0034947.1 mouse_genomes_project 9 63486554 63535002 + MGP_BALBcJ_P0092926 Dapk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092927.1 MGP_BALBcJ_G0034947.1 mouse_genomes_project 9 63534445 63537761 + Dapk2 protein_coding retained_intron MGP_BALBcJ_T0091499.1 MGP_BALBcJ_G0034450.1 mouse_genomes_project 9 18975228 18991073 + MGP_BALBcJ_P0091499 Zfp872 protein_coding protein_coding MGP_BALBcJ_T0091500.1 MGP_BALBcJ_G0034450.1 mouse_genomes_project 9 18986016 18989574 + MGP_BALBcJ_P0091500 Zfp872 protein_coding protein_coding MGP_BALBcJ_T0091126.1 MGP_BALBcJ_G0034301.1 mouse_genomes_project 9 4527747 4546458 - MGP_BALBcJ_P0091126 Birc2 protein_coding protein_coding MGP_BALBcJ_T0091127.1 MGP_BALBcJ_G0034301.1 mouse_genomes_project 9 4527756 4544661 - MGP_BALBcJ_P0091127 Birc2 protein_coding protein_coding MGP_BALBcJ_T0091128.1 MGP_BALBcJ_G0034301.1 mouse_genomes_project 9 4544189 4546206 - Birc2 protein_coding processed_transcript MGP_BALBcJ_T0091129.1 MGP_BALBcJ_G0034301.1 mouse_genomes_project 9 4545153 4546464 - Birc2 protein_coding retained_intron MGP_BALBcJ_T0091130.1 MGP_BALBcJ_G0034301.1 mouse_genomes_project 9 4546087 4546465 - MGP_BALBcJ_P0091130 Birc2 protein_coding protein_coding MGP_BALBcJ_T0092356.1 MGP_BALBcJ_G0034780.1 mouse_genomes_project 9 50208385 50366715 - MGP_BALBcJ_P0092356 Ddx10 protein_coding protein_coding MGP_BALBcJ_T0091352.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17409737 17413635 + Ubl5 protein_coding retained_intron MGP_BALBcJ_T0091353.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17410177 17413824 + MGP_BALBcJ_P0091353 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091354.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17410930 17413637 + MGP_BALBcJ_P0091354 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091355.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411199 17412509 + MGP_BALBcJ_P0091355 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091356.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411680 17413635 + MGP_BALBcJ_P0091356 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091357.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411693 17412766 + Ubl5 protein_coding retained_intron MGP_BALBcJ_T0091358.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411693 17414000 + MGP_BALBcJ_P0091358 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091359.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411694 17413635 + MGP_BALBcJ_P0091359 Ubl5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091360.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411727 17413629 + MGP_BALBcJ_P0091360 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091361.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17411900 17413635 + MGP_BALBcJ_P0091361 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091362.1 MGP_BALBcJ_G0034392.1 mouse_genomes_project 9 17412077 17413636 + MGP_BALBcJ_P0091362 Ubl5 protein_coding protein_coding MGP_BALBcJ_T0091832.1 MGP_BALBcJ_G0034580.1 mouse_genomes_project 9 35606193 35607171 - MGP_BALBcJ_P0091832 Olfr918 protein_coding protein_coding MGP_BALBcJ_T0091804.1 MGP_BALBcJ_G0034552.1 mouse_genomes_project 9 34972409 34973339 + MGP_BALBcJ_P0091804 Olfr885 protein_coding protein_coding MGP_BALBcJ_T0091859.1 MGP_BALBcJ_G0034601.1 mouse_genomes_project 9 36216491 36217454 - MGP_BALBcJ_P0091859 Olfr945 protein_coding protein_coding MGP_BALBcJ_T0091069.1 MGP_BALBcJ_G0034276.1 mouse_genomes_project 9 27778 79098 + MGP_BALBcJ_P0091069 Alkbh8 protein_coding protein_coding MGP_BALBcJ_T0091070.1 MGP_BALBcJ_G0034276.1 mouse_genomes_project 9 27815 77647 + MGP_BALBcJ_P0091070 Alkbh8 protein_coding unknown_likely_coding MGP_BALBcJ_T0091071.1 MGP_BALBcJ_G0034276.1 mouse_genomes_project 9 30725 77890 + MGP_BALBcJ_P0091071 Alkbh8 protein_coding protein_coding MGP_BALBcJ_T0005505.1 MGP_BALBcJ_G0004648.1 mouse_genomes_project 9 104473298 104475593 + 4930524O07Rik antisense antisense MGP_BALBcJ_T0005506.1 MGP_BALBcJ_G0004648.1 mouse_genomes_project 9 104473922 104475591 + 4930524O07Rik antisense antisense MGP_BALBcJ_T0005507.1 MGP_BALBcJ_G0004648.1 mouse_genomes_project 9 104474365 104476940 + 4930524O07Rik antisense antisense MGP_BALBcJ_T0092122.1 MGP_BALBcJ_G0034706.1 mouse_genomes_project 9 42240586 42251517 + BC049352 protein_coding lincRNA MGP_BALBcJ_T0092123.1 MGP_BALBcJ_G0034706.1 mouse_genomes_project 9 42240613 42309160 + BC049352 protein_coding lincRNA MGP_BALBcJ_T0092124.1 MGP_BALBcJ_G0034706.1 mouse_genomes_project 9 42254314 42309160 + BC049352 protein_coding lincRNA MGP_BALBcJ_T0092125.1 MGP_BALBcJ_G0034706.1 mouse_genomes_project 9 42254314 42309127 + MGP_BALBcJ_P0092125 BC049352 protein_coding protein_coding MGP_BALBcJ_T0101781.1 MGP_BALBcJ_G0039727.1 mouse_genomes_project 9 107610696 107618289 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101782.1 MGP_BALBcJ_G0039727.1 mouse_genomes_project 9 107612929 107618293 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101783.1 MGP_BALBcJ_G0039727.1 mouse_genomes_project 9 107613127 107616026 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0092685.1 MGP_BALBcJ_G0034882.1 mouse_genomes_project 9 57168387 57698508 - MGP_BALBcJ_P0092685 Thsd4 protein_coding protein_coding MGP_BALBcJ_T0092686.1 MGP_BALBcJ_G0034882.1 mouse_genomes_project 9 57168387 57712417 - MGP_BALBcJ_P0092686 Thsd4 protein_coding protein_coding MGP_BALBcJ_T0092687.1 MGP_BALBcJ_G0034882.1 mouse_genomes_project 9 57171175 57338541 - MGP_BALBcJ_P0092687 Thsd4 protein_coding protein_coding MGP_BALBcJ_T0092688.1 MGP_BALBcJ_G0034882.1 mouse_genomes_project 9 57194520 57202994 - Thsd4 protein_coding retained_intron MGP_BALBcJ_T0092689.1 MGP_BALBcJ_G0034882.1 mouse_genomes_project 9 57628292 57723516 - MGP_BALBcJ_P0092689 Thsd4 protein_coding protein_coding MGP_BALBcJ_T0092690.1 MGP_BALBcJ_G0034882.1 mouse_genomes_project 9 57711256 57712389 - Thsd4 protein_coding processed_transcript MGP_BALBcJ_T0018461.1 MGP_BALBcJ_G0015669.1 mouse_genomes_project 9 12018118 12022891 + Gm16568 processed_transcript processed_transcript MGP_BALBcJ_T0002390.1 MGP_BALBcJ_G0002300.1 mouse_genomes_project 9 83164991 83166343 + TEC TEC MGP_BALBcJ_T0005427.1 MGP_BALBcJ_G0004595.1 mouse_genomes_project 9 52660146 52661145 - Gm17226 antisense antisense MGP_BALBcJ_T0005428.1 MGP_BALBcJ_G0004595.1 mouse_genomes_project 9 52660157 52661486 - Gm17226 antisense antisense MGP_BALBcJ_T0002345.1 MGP_BALBcJ_G0002255.1 mouse_genomes_project 9 29391637 29393456 - TEC TEC MGP_BALBcJ_T0091310.1 MGP_BALBcJ_G0034377.1 mouse_genomes_project 9 16785294 16786371 - MGP_BALBcJ_P0091310 Olfr866 protein_coding protein_coding MGP_BALBcJ_T0002384.1 MGP_BALBcJ_G0002294.1 mouse_genomes_project 9 74694954 74695964 - TEC TEC MGP_BALBcJ_T0011090.1 MGP_BALBcJ_G0009215.1 mouse_genomes_project 9 120798011 120798110 + Mir138-1 miRNA miRNA MGP_BALBcJ_T0002395.1 MGP_BALBcJ_G0002304.1 mouse_genomes_project 9 84217807 84220119 - TEC TEC MGP_BALBcJ_T0099061.1 MGP_BALBcJ_G0037097.1 mouse_genomes_project 9 121906320 121926959 - Gm17021 sense_overlapping sense_overlapping MGP_BALBcJ_T0095302.1 MGP_BALBcJ_G0035427.1 mouse_genomes_project 9 119898406 119907256 - MGP_BALBcJ_P0095302 Hhatl protein_coding protein_coding MGP_BALBcJ_T0095303.1 MGP_BALBcJ_G0035427.1 mouse_genomes_project 9 119898412 119905786 - MGP_BALBcJ_P0095303 Hhatl protein_coding protein_coding MGP_BALBcJ_T0009332.1 MGP_BALBcJ_G0007495.1 mouse_genomes_project 9 120693158 120794120 + 9530059O14Rik lincRNA lincRNA MGP_BALBcJ_T0009333.1 MGP_BALBcJ_G0007495.1 mouse_genomes_project 9 120693162 120701605 + 9530059O14Rik lincRNA lincRNA MGP_BALBcJ_T0009334.1 MGP_BALBcJ_G0007495.1 mouse_genomes_project 9 120693163 120794751 + 9530059O14Rik lincRNA lincRNA MGP_BALBcJ_T0018532.1 MGP_BALBcJ_G0015693.1 mouse_genomes_project 9 96041429 96042793 - 4930579K19Rik processed_transcript lincRNA MGP_BALBcJ_T0018533.1 MGP_BALBcJ_G0015693.1 mouse_genomes_project 9 96041660 96042812 - 4930579K19Rik processed_transcript TEC MGP_BALBcJ_T0018534.1 MGP_BALBcJ_G0015693.1 mouse_genomes_project 9 96042160 96042812 - 4930579K19Rik processed_transcript processed_transcript MGP_BALBcJ_T0002442.1 MGP_BALBcJ_G0002351.1 mouse_genomes_project 9 101606329 101608502 - TEC TEC MGP_BALBcJ_T0091538.1 MGP_BALBcJ_G0034467.1 mouse_genomes_project 9 22308061 22432123 + MGP_BALBcJ_P0091538 Eepd1 protein_coding protein_coding MGP_BALBcJ_T0091539.1 MGP_BALBcJ_G0034467.1 mouse_genomes_project 9 22309377 22313824 + Eepd1 protein_coding processed_transcript MGP_BALBcJ_T0095003.1 MGP_BALBcJ_G0035345.1 mouse_genomes_project 9 108875879 108878661 - MGP_BALBcJ_P0095003 Ccrl2 protein_coding protein_coding MGP_BALBcJ_T0095004.1 MGP_BALBcJ_G0035345.1 mouse_genomes_project 9 108876225 108878910 - MGP_BALBcJ_P0095004 Ccrl2 protein_coding protein_coding MGP_BALBcJ_T0095005.1 MGP_BALBcJ_G0035345.1 mouse_genomes_project 9 108877420 108878637 - MGP_BALBcJ_P0095005 Ccrl2 protein_coding protein_coding MGP_BALBcJ_T0002411.1 MGP_BALBcJ_G0002320.1 mouse_genomes_project 9 92861672 92862764 + TEC TEC MGP_BALBcJ_T0091765.1 MGP_BALBcJ_G0034531.1 mouse_genomes_project 9 34152947 34226466 - MGP_BALBcJ_P0091765 Ccdc15 protein_coding protein_coding MGP_BALBcJ_T0092336.1 MGP_BALBcJ_G0034769.1 mouse_genomes_project 9 48221329 48247633 - MGP_BALBcJ_P0092336 4833427G06Rik protein_coding protein_coding MGP_BALBcJ_T0091881.1 MGP_BALBcJ_G0034617.1 mouse_genomes_project 9 36726556 36727489 + MGP_BALBcJ_P0091881 Olfr967 protein_coding protein_coding MGP_BALBcJ_T0091812.1 MGP_BALBcJ_G0034560.1 mouse_genomes_project 9 35163720 35164662 + MGP_BALBcJ_P0091812 Olfr143 protein_coding protein_coding MGP_BALBcJ_T0101436.1 MGP_BALBcJ_G0039472.1 mouse_genomes_project 9 44945 45075 + Gm24918 snoRNA snoRNA MGP_BALBcJ_T0092292.1 MGP_BALBcJ_G0034762.1 mouse_genomes_project 9 47864805 47868695 + MGP_BALBcJ_P0092292 Cryab protein_coding protein_coding MGP_BALBcJ_T0011015.1 MGP_BALBcJ_G0009140.1 mouse_genomes_project 9 4979664 4979760 + Mir1899 miRNA miRNA MGP_BALBcJ_T0016019.1 MGP_BALBcJ_G0014116.1 mouse_genomes_project 9 56672972 56673447 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018501.1 MGP_BALBcJ_G0015681.1 mouse_genomes_project 9 69737344 69745901 + Gm27230 processed_transcript lincRNA MGP_BALBcJ_T0018502.1 MGP_BALBcJ_G0015681.1 mouse_genomes_project 9 69737350 69744096 + Gm27230 processed_transcript lincRNA MGP_BALBcJ_T0018503.1 MGP_BALBcJ_G0015681.1 mouse_genomes_project 9 69744809 69745483 + Gm27230 processed_transcript retained_intron MGP_BALBcJ_T0092956.1 MGP_BALBcJ_G0034953.1 mouse_genomes_project 9 64089679 64091715 + MGP_BALBcJ_P0092956 Gm10647 protein_coding protein_coding MGP_BALBcJ_T0092339.1 MGP_BALBcJ_G0034772.1 mouse_genomes_project 9 48417405 48425707 - MGP_BALBcJ_P0092339 Gm684 protein_coding protein_coding MGP_BALBcJ_T0016035.1 MGP_BALBcJ_G0014132.1 mouse_genomes_project 9 69951582 69952399 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002406.1 MGP_BALBcJ_G0002315.1 mouse_genomes_project 9 88762587 88764406 - TEC TEC MGP_BALBcJ_T0011065.1 MGP_BALBcJ_G0009190.1 mouse_genomes_project 9 89737327 89737431 - Mir6386 miRNA miRNA MGP_BALBcJ_T0091235.1 MGP_BALBcJ_G0034335.1 mouse_genomes_project 9 11969692 11988614 - MGP_BALBcJ_P0091235 4931406C07Rik protein_coding protein_coding MGP_BALBcJ_T0091236.1 MGP_BALBcJ_G0034335.1 mouse_genomes_project 9 11969692 11993787 - MGP_BALBcJ_P0091236 4931406C07Rik protein_coding protein_coding MGP_BALBcJ_T0091237.1 MGP_BALBcJ_G0034335.1 mouse_genomes_project 9 11969692 11993506 - MGP_BALBcJ_P0091237 4931406C07Rik protein_coding protein_coding MGP_BALBcJ_T0092350.1 MGP_BALBcJ_G0034777.1 mouse_genomes_project 9 49187624 49229583 + MGP_BALBcJ_P0092350 Rdx protein_coding protein_coding MGP_BALBcJ_T0092351.1 MGP_BALBcJ_G0034777.1 mouse_genomes_project 9 49188413 49229583 + MGP_BALBcJ_P0092351 Rdx protein_coding protein_coding MGP_BALBcJ_T0092352.1 MGP_BALBcJ_G0034777.1 mouse_genomes_project 9 49188413 49216008 + MGP_BALBcJ_P0092352 Rdx protein_coding protein_coding MGP_BALBcJ_T0092106.1 MGP_BALBcJ_G0034699.1 mouse_genomes_project 9 42099057 42110855 + MGP_BALBcJ_P0092106 Mpzl2 protein_coding protein_coding MGP_BALBcJ_T0091927.1 MGP_BALBcJ_G0034643.1 mouse_genomes_project 9 37878825 37942331 - MGP_BALBcJ_P0091927 Jhy protein_coding protein_coding MGP_BALBcJ_T0091928.1 MGP_BALBcJ_G0034643.1 mouse_genomes_project 9 37878827 37881597 - Jhy protein_coding retained_intron MGP_BALBcJ_T0091929.1 MGP_BALBcJ_G0034643.1 mouse_genomes_project 9 37939129 37940569 - MGP_BALBcJ_P0091929 Jhy protein_coding protein_coding MGP_BALBcJ_T0091520.1 MGP_BALBcJ_G0034459.1 mouse_genomes_project 9 20020177 20278544 + MGP_BALBcJ_P0091520 Bmper protein_coding protein_coding MGP_BALBcJ_T0095109.1 MGP_BALBcJ_G0035371.1 mouse_genomes_project 9 112762388 112819494 - MGP_BALBcJ_P0095109 Cmtm8 protein_coding protein_coding MGP_BALBcJ_T0101496.1 MGP_BALBcJ_G0039532.1 mouse_genomes_project 9 98756071 98756198 + Gm24338 snoRNA snoRNA MGP_BALBcJ_T0093784.1 MGP_BALBcJ_G0035131.1 mouse_genomes_project 9 96067931 96080871 - MGP_BALBcJ_P0093784 Mrps22 protein_coding protein_coding MGP_BALBcJ_T0093785.1 MGP_BALBcJ_G0035131.1 mouse_genomes_project 9 96074412 96080856 - Mrps22 protein_coding retained_intron MGP_BALBcJ_T0091704.1 MGP_BALBcJ_G0034515.1 mouse_genomes_project 9 32646003 32648066 - MGP_BALBcJ_P0091704 D730048I06Rik protein_coding protein_coding MGP_BALBcJ_T0091474.1 MGP_BALBcJ_G0034437.1 mouse_genomes_project 9 18720097 18733046 + MGP_BALBcJ_P0091474 Plppr2 protein_coding protein_coding MGP_BALBcJ_T0091475.1 MGP_BALBcJ_G0034437.1 mouse_genomes_project 9 18721506 18732152 + MGP_BALBcJ_P0091475 Plppr2 protein_coding protein_coding MGP_BALBcJ_T0091305.1 MGP_BALBcJ_G0034372.1 mouse_genomes_project 9 16526514 16530578 + MGP_BALBcJ_P0091305 Olfr58 protein_coding protein_coding MGP_BALBcJ_T0093584.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494579 87506633 + MGP_BALBcJ_P0093584 Ctsh protein_coding protein_coding MGP_BALBcJ_T0093585.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494694 87517150 + MGP_BALBcJ_P0093585 Ctsh protein_coding protein_coding MGP_BALBcJ_T0093586.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494933 87517148 + Ctsh protein_coding retained_intron MGP_BALBcJ_T0093587.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494948 87495774 + Ctsh protein_coding retained_intron MGP_BALBcJ_T0093588.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494964 87505450 + MGP_BALBcJ_P0093588 Ctsh protein_coding protein_coding MGP_BALBcJ_T0093589.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494965 87517148 + MGP_BALBcJ_P0093589 Ctsh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093590.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494981 87508553 + Ctsh protein_coding retained_intron MGP_BALBcJ_T0093591.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87494986 87516802 + MGP_BALBcJ_P0093591 Ctsh protein_coding protein_coding MGP_BALBcJ_T0093592.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87501339 87502809 + Ctsh protein_coding retained_intron MGP_BALBcJ_T0093593.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87503735 87513094 + Ctsh protein_coding retained_intron MGP_BALBcJ_T0093594.1 MGP_BALBcJ_G0035092.1 mouse_genomes_project 9 87512904 87516810 + Ctsh protein_coding retained_intron MGP_BALBcJ_T0016116.1 MGP_BALBcJ_G0014213.1 mouse_genomes_project 9 101907706 101908421 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093052.1 MGP_BALBcJ_G0034976.1 mouse_genomes_project 9 68002255 68003865 + MGP_BALBcJ_P0093052 Gm10642 protein_coding protein_coding MGP_BALBcJ_T0011024.1 MGP_BALBcJ_G0009149.1 mouse_genomes_project 9 17805474 17805552 - Mir1900 miRNA miRNA MGP_BALBcJ_T0093670.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93168276 93213876 - MGP_BALBcJ_P0093670 Trpc1 protein_coding protein_coding MGP_BALBcJ_T0093671.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93169821 93213876 - MGP_BALBcJ_P0093671 Trpc1 protein_coding protein_coding MGP_BALBcJ_T0093672.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93169821 93213876 - MGP_BALBcJ_P0093672 Trpc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093673.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93169821 93213876 - MGP_BALBcJ_P0093673 Trpc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093674.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93178379 93181487 - Trpc1 protein_coding retained_intron MGP_BALBcJ_T0093675.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93184465 93195735 - MGP_BALBcJ_P0093675 Trpc1 protein_coding protein_coding MGP_BALBcJ_T0093676.1 MGP_BALBcJ_G0035111.1 mouse_genomes_project 9 93212555 93213893 - Trpc1 protein_coding retained_intron MGP_BALBcJ_T0092834.1 MGP_BALBcJ_G0034917.1 mouse_genomes_project 9 62060483 62169190 + MGP_BALBcJ_P0092834 Dennd4a protein_coding protein_coding MGP_BALBcJ_T0091562.1 MGP_BALBcJ_G0034473.1 mouse_genomes_project 9 23801673 23810074 + MGP_BALBcJ_P0091562 Thyn1 protein_coding protein_coding MGP_BALBcJ_T0094273.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105117788 105128484 + MGP_BALBcJ_P0094273 Rassf1 protein_coding protein_coding MGP_BALBcJ_T0094274.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105117795 105120740 + Rassf1 protein_coding retained_intron MGP_BALBcJ_T0094275.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105117800 105128480 + MGP_BALBcJ_P0094275 Rassf1 protein_coding protein_coding MGP_BALBcJ_T0094276.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105117823 105128480 + MGP_BALBcJ_P0094276 Rassf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094277.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105120816 105128480 + MGP_BALBcJ_P0094277 Rassf1 protein_coding protein_coding MGP_BALBcJ_T0094278.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105121609 105124029 + Rassf1 protein_coding processed_transcript MGP_BALBcJ_T0094279.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105122839 105128480 + Rassf1 protein_coding processed_transcript MGP_BALBcJ_T0094280.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105122971 105128480 + Rassf1 protein_coding retained_intron MGP_BALBcJ_T0094281.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105124163 105128048 + Rassf1 protein_coding retained_intron MGP_BALBcJ_T0094282.1 MGP_BALBcJ_G0035230.1 mouse_genomes_project 9 105124170 105126644 + Rassf1 protein_coding retained_intron MGP_BALBcJ_T0016014.1 MGP_BALBcJ_G0014111.1 mouse_genomes_project 9 46155026 46155719 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091155.1 MGP_BALBcJ_G0034309.1 mouse_genomes_project 9 5686986 5690969 + MGP_BALBcJ_P0091155 Gm16485 protein_coding protein_coding MGP_BALBcJ_T0099029.1 MGP_BALBcJ_G0037070.1 mouse_genomes_project 9 38570756 38571066 + Gm28119 sense_intronic sense_intronic MGP_BALBcJ_T0092536.1 MGP_BALBcJ_G0034839.1 mouse_genomes_project 9 54673074 54674420 + MGP_BALBcJ_P0092536 Rpp25 protein_coding protein_coding MGP_BALBcJ_T0093639.1 MGP_BALBcJ_G0035102.1 mouse_genomes_project 9 89779650 89796790 + 1700057G04Rik protein_coding processed_transcript MGP_BALBcJ_T0093640.1 MGP_BALBcJ_G0035102.1 mouse_genomes_project 9 89779650 89814504 + MGP_BALBcJ_P0093640 1700057G04Rik protein_coding protein_coding MGP_BALBcJ_T0093641.1 MGP_BALBcJ_G0035102.1 mouse_genomes_project 9 89779650 89829133 + MGP_BALBcJ_P0093641 1700057G04Rik protein_coding protein_coding MGP_BALBcJ_T0093642.1 MGP_BALBcJ_G0035102.1 mouse_genomes_project 9 89779681 89822354 + 1700057G04Rik protein_coding processed_transcript MGP_BALBcJ_T0093643.1 MGP_BALBcJ_G0035102.1 mouse_genomes_project 9 89814325 89829076 + MGP_BALBcJ_P0093643 1700057G04Rik protein_coding protein_coding MGP_BALBcJ_T0093644.1 MGP_BALBcJ_G0035102.1 mouse_genomes_project 9 89822367 89829133 + MGP_BALBcJ_P0093644 1700057G04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002470.1 MGP_BALBcJ_G0002379.1 mouse_genomes_project 9 119871134 119874437 - TEC TEC MGP_BALBcJ_T0101449.1 MGP_BALBcJ_G0039485.1 mouse_genomes_project 9 17657513 17657598 + Gm24067 snoRNA snoRNA MGP_BALBcJ_T0092898.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178180 63304480 + MGP_BALBcJ_P0092898 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092899.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178230 63265172 + Csnk1g1 protein_coding retained_intron MGP_BALBcJ_T0092900.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178233 63307587 + MGP_BALBcJ_P0092900 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092901.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178242 63307593 + MGP_BALBcJ_P0092901 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092902.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178276 63223429 + MGP_BALBcJ_P0092902 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092903.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178286 63240276 + Csnk1g1 protein_coding retained_intron MGP_BALBcJ_T0092904.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178344 63303013 + MGP_BALBcJ_P0092904 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092905.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63178699 63305649 + MGP_BALBcJ_P0092905 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092906.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63193428 63293428 + MGP_BALBcJ_P0092906 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092907.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63223117 63307583 + MGP_BALBcJ_P0092907 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092908.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63269050 63294907 + MGP_BALBcJ_P0092908 Csnk1g1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092909.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63271363 63274307 + Csnk1g1 protein_coding retained_intron MGP_BALBcJ_T0092910.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63271387 63302302 + MGP_BALBcJ_P0092910 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092911.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63271730 63293428 + MGP_BALBcJ_P0092911 Csnk1g1 protein_coding protein_coding MGP_BALBcJ_T0092912.1 MGP_BALBcJ_G0034942.1 mouse_genomes_project 9 63298591 63302320 + Csnk1g1 protein_coding retained_intron MGP_BALBcJ_T0002433.1 MGP_BALBcJ_G0002342.1 mouse_genomes_project 9 99592397 99597179 - TEC TEC MGP_BALBcJ_T0095006.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108939645 109024888 + MGP_BALBcJ_P0095006 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095007.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108940164 109050724 + MGP_BALBcJ_P0095007 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095008.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108940166 109049278 + MGP_BALBcJ_P0095008 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095009.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108940188 109050724 + MGP_BALBcJ_P0095009 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095010.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108940243 109050726 + MGP_BALBcJ_P0095010 Lrrfip2 protein_coding unknown_likely_coding MGP_BALBcJ_T0095011.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108940498 109049278 + MGP_BALBcJ_P0095011 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095012.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 108941729 109049278 + MGP_BALBcJ_P0095012 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095014.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 109010253 109039255 + MGP_BALBcJ_P0095014 Lrrfip2 protein_coding protein_coding MGP_BALBcJ_T0095015.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 109018153 109050724 + Lrrfip2 protein_coding processed_transcript MGP_BALBcJ_T0095016.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 109024567 109030961 + Lrrfip2 protein_coding retained_intron MGP_BALBcJ_T0095017.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 109039248 109041565 + Lrrfip2 protein_coding retained_intron MGP_BALBcJ_T0095018.1 MGP_BALBcJ_G0035346.1 mouse_genomes_project 9 109044225 109049009 + Lrrfip2 protein_coding retained_intron MGP_BALBcJ_T0094268.1 MGP_BALBcJ_G0035229.1 mouse_genomes_project 9 105113552 105117553 + MGP_BALBcJ_P0094268 Zmynd10 protein_coding protein_coding MGP_BALBcJ_T0094269.1 MGP_BALBcJ_G0035229.1 mouse_genomes_project 9 105113558 105114124 + Zmynd10 protein_coding processed_transcript MGP_BALBcJ_T0094270.1 MGP_BALBcJ_G0035229.1 mouse_genomes_project 9 105113708 105117553 + MGP_BALBcJ_P0094270 Zmynd10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094271.1 MGP_BALBcJ_G0035229.1 mouse_genomes_project 9 105115401 105116449 + Zmynd10 protein_coding retained_intron MGP_BALBcJ_T0094272.1 MGP_BALBcJ_G0035229.1 mouse_genomes_project 9 105116722 105117453 + Zmynd10 protein_coding retained_intron MGP_BALBcJ_T0092566.1 MGP_BALBcJ_G0034853.1 mouse_genomes_project 9 55086039 55105074 + MGP_BALBcJ_P0092566 Ubl7 protein_coding protein_coding MGP_BALBcJ_T0093706.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93666512 93787006 + MGP_BALBcJ_P0093706 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093707.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93666543 93788023 + MGP_BALBcJ_P0093707 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093708.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93666575 93716716 + Tfdp2 protein_coding processed_transcript MGP_BALBcJ_T0093709.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93666648 93787013 + MGP_BALBcJ_P0093709 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093710.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93672342 93764052 + MGP_BALBcJ_P0093710 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093711.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93728080 93779628 + MGP_BALBcJ_P0093711 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093712.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93728117 93756978 + MGP_BALBcJ_P0093712 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093713.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93728134 93787009 + MGP_BALBcJ_P0093713 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093714.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93728660 93787947 + MGP_BALBcJ_P0093714 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0093715.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93757493 93760604 + Tfdp2 protein_coding retained_intron MGP_BALBcJ_T0093716.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93774043 93777194 + Tfdp2 protein_coding retained_intron MGP_BALBcJ_T0093717.1 MGP_BALBcJ_G0035116.1 mouse_genomes_project 9 93779611 93786945 + MGP_BALBcJ_P0093717 Tfdp2 protein_coding protein_coding MGP_BALBcJ_T0009265.1 MGP_BALBcJ_G0007444.1 mouse_genomes_project 9 82195220 82205542 + 4930554C24Rik lincRNA lincRNA MGP_BALBcJ_T0091862.1 MGP_BALBcJ_G0034604.1 mouse_genomes_project 9 36420086 36421333 + MGP_BALBcJ_P0091862 Olfr954 protein_coding protein_coding MGP_BALBcJ_T0092172.1 MGP_BALBcJ_G0034719.1 mouse_genomes_project 9 43081514 43291476 + MGP_BALBcJ_P0092172 Sik3 protein_coding protein_coding MGP_BALBcJ_T0092173.1 MGP_BALBcJ_G0034719.1 mouse_genomes_project 9 43081558 43289554 + MGP_BALBcJ_P0092173 Sik3 protein_coding protein_coding MGP_BALBcJ_T0092174.1 MGP_BALBcJ_G0034719.1 mouse_genomes_project 9 43081694 43288513 + MGP_BALBcJ_P0092174 Sik3 protein_coding protein_coding MGP_BALBcJ_T0092175.1 MGP_BALBcJ_G0034719.1 mouse_genomes_project 9 43081726 43270148 + MGP_BALBcJ_P0092175 Sik3 protein_coding protein_coding MGP_BALBcJ_T0092176.1 MGP_BALBcJ_G0034719.1 mouse_genomes_project 9 43220101 43291470 + Sik3 protein_coding processed_transcript MGP_BALBcJ_T0092177.1 MGP_BALBcJ_G0034719.1 mouse_genomes_project 9 43286850 43288513 + MGP_BALBcJ_P0092177 Sik3 protein_coding protein_coding MGP_BALBcJ_T0092433.1 MGP_BALBcJ_G0034810.1 mouse_genomes_project 9 52147434 52167910 - MGP_BALBcJ_P0092433 Chrnb4 protein_coding protein_coding MGP_BALBcJ_T0093939.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100754494 100780783 - MGP_BALBcJ_P0093939 Trf protein_coding protein_coding MGP_BALBcJ_T0093940.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100759329 100780954 - MGP_BALBcJ_P0093940 Trf protein_coding protein_coding MGP_BALBcJ_T0093941.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100759559 100762510 - Trf protein_coding retained_intron MGP_BALBcJ_T0093942.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100761073 100770409 - MGP_BALBcJ_P0093942 Trf protein_coding protein_coding MGP_BALBcJ_T0093943.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100761141 100772614 - MGP_BALBcJ_P0093943 Trf protein_coding protein_coding MGP_BALBcJ_T0093944.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100766338 100780780 - MGP_BALBcJ_P0093944 Trf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093945.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100771437 100773228 - Trf protein_coding retained_intron MGP_BALBcJ_T0093946.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100772647 100780776 - MGP_BALBcJ_P0093946 Trf protein_coding protein_coding MGP_BALBcJ_T0093947.1 MGP_BALBcJ_G0035169.1 mouse_genomes_project 9 100773637 100779005 - MGP_BALBcJ_P0093947 Trf protein_coding protein_coding MGP_BALBcJ_T0095028.1 MGP_BALBcJ_G0035348.1 mouse_genomes_project 9 109097079 109104238 + MGP_BALBcJ_P0095028 Epm2aip1 protein_coding protein_coding MGP_BALBcJ_T0095029.1 MGP_BALBcJ_G0035348.1 mouse_genomes_project 9 109097095 109104242 + MGP_BALBcJ_P0095029 Epm2aip1 protein_coding protein_coding MGP_BALBcJ_T0095030.1 MGP_BALBcJ_G0035348.1 mouse_genomes_project 9 109099252 109102691 + Epm2aip1 protein_coding processed_transcript MGP_BALBcJ_T0100175.1 MGP_BALBcJ_G0038211.1 mouse_genomes_project 9 29313168 29313275 - Gm22060 snRNA snRNA MGP_BALBcJ_T0016101.1 MGP_BALBcJ_G0014198.1 mouse_genomes_project 9 96408366 96408801 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095275.1 MGP_BALBcJ_G0035421.1 mouse_genomes_project 9 119755019 119786354 + MGP_BALBcJ_P0095275 Vipr1 protein_coding protein_coding MGP_BALBcJ_T0095276.1 MGP_BALBcJ_G0035421.1 mouse_genomes_project 9 119755356 119773674 + Vipr1 protein_coding processed_transcript MGP_BALBcJ_T0095277.1 MGP_BALBcJ_G0035421.1 mouse_genomes_project 9 119778003 119779296 + Vipr1 protein_coding retained_intron MGP_BALBcJ_T0095278.1 MGP_BALBcJ_G0035421.1 mouse_genomes_project 9 119782105 119782909 + Vipr1 protein_coding retained_intron MGP_BALBcJ_T0095411.1 MGP_BALBcJ_G0035467.1 mouse_genomes_project 9 122268067 122273603 + MGP_BALBcJ_P0095411 Ccr5 protein_coding protein_coding MGP_BALBcJ_T0095412.1 MGP_BALBcJ_G0035467.1 mouse_genomes_project 9 122268097 122271688 + Ccr5 protein_coding processed_transcript MGP_BALBcJ_T0095413.1 MGP_BALBcJ_G0035467.1 mouse_genomes_project 9 122268097 122278322 + MGP_BALBcJ_P0095413 Ccr5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095414.1 MGP_BALBcJ_G0035467.1 mouse_genomes_project 9 122268105 122271152 + MGP_BALBcJ_P0095414 Ccr5 protein_coding protein_coding MGP_BALBcJ_T0095415.1 MGP_BALBcJ_G0035467.1 mouse_genomes_project 9 122273104 122276671 + Ccr5 protein_coding processed_transcript MGP_BALBcJ_T0095416.1 MGP_BALBcJ_G0035467.1 mouse_genomes_project 9 122275168 122293931 + Ccr5 protein_coding processed_transcript MGP_BALBcJ_T0009293.1 MGP_BALBcJ_G0007465.1 mouse_genomes_project 9 97840337 97842227 - Gm28167 lincRNA lincRNA MGP_BALBcJ_T0095269.1 MGP_BALBcJ_G0035418.1 mouse_genomes_project 9 119479032 119565765 + MGP_BALBcJ_P0095269 Trak1 protein_coding unknown_likely_coding MGP_BALBcJ_T0095270.1 MGP_BALBcJ_G0035418.1 mouse_genomes_project 9 119483097 119584380 + MGP_BALBcJ_P0095270 Trak1 protein_coding protein_coding MGP_BALBcJ_T0094821.1 MGP_BALBcJ_G0035315.1 mouse_genomes_project 9 107664916 107683453 + MGP_BALBcJ_P0094821 Cdc25a protein_coding protein_coding MGP_BALBcJ_T0094822.1 MGP_BALBcJ_G0035315.1 mouse_genomes_project 9 107665277 107671023 + MGP_BALBcJ_P0094822 Cdc25a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094823.1 MGP_BALBcJ_G0035315.1 mouse_genomes_project 9 107665643 107682206 + MGP_BALBcJ_P0094823 Cdc25a protein_coding protein_coding MGP_BALBcJ_T0094825.1 MGP_BALBcJ_G0035315.1 mouse_genomes_project 9 107673888 107679559 + Cdc25a protein_coding retained_intron MGP_BALBcJ_T0094826.1 MGP_BALBcJ_G0035315.1 mouse_genomes_project 9 107677274 107681926 + Cdc25a protein_coding retained_intron MGP_BALBcJ_T0094827.1 MGP_BALBcJ_G0035315.1 mouse_genomes_project 9 107678394 107678929 + Cdc25a protein_coding retained_intron MGP_BALBcJ_T0011055.1 MGP_BALBcJ_G0009180.1 mouse_genomes_project 9 64539159 64539226 - Mir190a miRNA miRNA MGP_BALBcJ_T0016133.1 MGP_BALBcJ_G0014230.1 mouse_genomes_project 9 119363395 119363745 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011066.1 MGP_BALBcJ_G0009191.1 mouse_genomes_project 9 92212377 92212439 + Mir7656 miRNA miRNA MGP_BALBcJ_T0093815.1 MGP_BALBcJ_G0035143.1 mouse_genomes_project 9 96877151 96929216 - MGP_BALBcJ_P0093815 Mras protein_coding protein_coding MGP_BALBcJ_T0093816.1 MGP_BALBcJ_G0035143.1 mouse_genomes_project 9 96879658 96928716 - MGP_BALBcJ_P0093816 Mras protein_coding protein_coding MGP_BALBcJ_T0093817.1 MGP_BALBcJ_G0035143.1 mouse_genomes_project 9 96879709 96917754 - MGP_BALBcJ_P0093817 Mras protein_coding protein_coding MGP_BALBcJ_T0093818.1 MGP_BALBcJ_G0035143.1 mouse_genomes_project 9 96881463 96886426 - Mras protein_coding retained_intron MGP_BALBcJ_T0093819.1 MGP_BALBcJ_G0035143.1 mouse_genomes_project 9 96884570 96893020 - Mras protein_coding retained_intron MGP_BALBcJ_T0093820.1 MGP_BALBcJ_G0035143.1 mouse_genomes_project 9 96884731 96912010 - MGP_BALBcJ_P0093820 Mras protein_coding protein_coding MGP_BALBcJ_T0091709.1 MGP_BALBcJ_G0034519.1 mouse_genomes_project 9 33362609 33364184 + MGP_BALBcJ_P0091709 Gm9513 protein_coding protein_coding MGP_BALBcJ_T0005502.1 MGP_BALBcJ_G0004645.1 mouse_genomes_project 9 103889408 103915754 - Gm29123 antisense antisense MGP_BALBcJ_T0009279.1 MGP_BALBcJ_G0007455.1 mouse_genomes_project 9 90432196 90459274 - 1700034K08Rik lincRNA lincRNA MGP_BALBcJ_T0009280.1 MGP_BALBcJ_G0007455.1 mouse_genomes_project 9 90432196 90443169 - 1700034K08Rik lincRNA lincRNA MGP_BALBcJ_T0009281.1 MGP_BALBcJ_G0007455.1 mouse_genomes_project 9 90432277 90459280 - 1700034K08Rik lincRNA lincRNA MGP_BALBcJ_T0009282.1 MGP_BALBcJ_G0007455.1 mouse_genomes_project 9 90454793 90459271 - 1700034K08Rik lincRNA lincRNA MGP_BALBcJ_T0093073.1 MGP_BALBcJ_G0034982.1 mouse_genomes_project 9 68808015 68922416 - MGP_BALBcJ_P0093073 Gcom1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093074.1 MGP_BALBcJ_G0034982.1 mouse_genomes_project 9 68808015 68922416 - MGP_BALBcJ_P0093074 Gcom1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093075.1 MGP_BALBcJ_G0034982.1 mouse_genomes_project 9 68808015 68922416 - MGP_BALBcJ_P0093075 Gcom1 protein_coding protein_coding MGP_BALBcJ_T0093076.1 MGP_BALBcJ_G0034982.1 mouse_genomes_project 9 68808015 68922416 - MGP_BALBcJ_P0093076 Gcom1 protein_coding protein_coding MGP_BALBcJ_T0101983.1 MGP_BALBcJ_G0039830.1 mouse_genomes_project 9 96947791 96962503 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101984.1 MGP_BALBcJ_G0039830.1 mouse_genomes_project 9 96961991 96966341 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0093391.1 MGP_BALBcJ_G0035049.1 mouse_genomes_project 9 77740293 77870621 - MGP_BALBcJ_P0093391 Impg1 protein_coding protein_coding MGP_BALBcJ_T0093392.1 MGP_BALBcJ_G0035049.1 mouse_genomes_project 9 77740930 77870664 - MGP_BALBcJ_P0093392 Impg1 protein_coding protein_coding MGP_BALBcJ_T0093393.1 MGP_BALBcJ_G0035049.1 mouse_genomes_project 9 77809994 77870621 - MGP_BALBcJ_P0093393 Impg1 protein_coding protein_coding MGP_BALBcJ_T0091363.1 MGP_BALBcJ_G0034393.1 mouse_genomes_project 9 17418989 17433857 + MGP_BALBcJ_P0091363 Pin1 protein_coding protein_coding MGP_BALBcJ_T0091600.1 MGP_BALBcJ_G0034486.1 mouse_genomes_project 9 27979268 28043741 - MGP_BALBcJ_P0091600 Aplp2 protein_coding protein_coding MGP_BALBcJ_T0091601.1 MGP_BALBcJ_G0034486.1 mouse_genomes_project 9 27979268 28043741 - MGP_BALBcJ_P0091601 Aplp2 protein_coding protein_coding MGP_BALBcJ_T0091761.1 MGP_BALBcJ_G0034529.1 mouse_genomes_project 9 34082336 34098245 + MGP_BALBcJ_P0091761 Tmem218 protein_coding protein_coding MGP_BALBcJ_T0016077.1 MGP_BALBcJ_G0014174.1 mouse_genomes_project 9 88181378 88181979 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101445.1 MGP_BALBcJ_G0039481.1 mouse_genomes_project 9 12004059 12004159 + snoRNA snoRNA MGP_BALBcJ_T0092491.1 MGP_BALBcJ_G0034826.1 mouse_genomes_project 9 54014842 54049636 + MGP_BALBcJ_P0092491 Cspg4 protein_coding protein_coding MGP_BALBcJ_T0005490.1 MGP_BALBcJ_G0004635.1 mouse_genomes_project 9 96069736 96070992 + Gm37637 antisense antisense MGP_BALBcJ_T0091882.1 MGP_BALBcJ_G0034618.1 mouse_genomes_project 9 36749425 36751137 - MGP_BALBcJ_P0091882 Olfr968 protein_coding protein_coding MGP_BALBcJ_T0092732.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59563267 59599528 + Anp32a protein_coding processed_transcript MGP_BALBcJ_T0092733.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59563303 59600639 + MGP_BALBcJ_P0092733 Anp32a protein_coding protein_coding MGP_BALBcJ_T0092734.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59563876 59596553 + MGP_BALBcJ_P0092734 Anp32a protein_coding protein_coding MGP_BALBcJ_T0092735.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59564049 59599499 + MGP_BALBcJ_P0092735 Anp32a protein_coding protein_coding MGP_BALBcJ_T0092736.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59564438 59595418 + MGP_BALBcJ_P0092736 Anp32a protein_coding protein_coding MGP_BALBcJ_T0092737.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59566037 59595431 + Anp32a protein_coding processed_transcript MGP_BALBcJ_T0092738.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59566768 59596550 + Anp32a protein_coding processed_transcript MGP_BALBcJ_T0092739.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59588780 59595511 + Anp32a protein_coding processed_transcript MGP_BALBcJ_T0092740.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59588786 59599134 + Anp32a protein_coding processed_transcript MGP_BALBcJ_T0092741.1 MGP_BALBcJ_G0034893.1 mouse_genomes_project 9 59595273 59599608 + Anp32a protein_coding retained_intron MGP_BALBcJ_T0092723.1 MGP_BALBcJ_G0034890.1 mouse_genomes_project 9 59168698 59243725 - Paqr5 protein_coding processed_transcript MGP_BALBcJ_T0092724.1 MGP_BALBcJ_G0034890.1 mouse_genomes_project 9 59168955 59243780 - MGP_BALBcJ_P0092724 Paqr5 protein_coding protein_coding MGP_BALBcJ_T0092725.1 MGP_BALBcJ_G0034890.1 mouse_genomes_project 9 59171263 59192404 - MGP_BALBcJ_P0092725 Paqr5 protein_coding protein_coding MGP_BALBcJ_T0093293.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74823679 74938935 - MGP_BALBcJ_P0093293 Lrrc1 protein_coding protein_coding MGP_BALBcJ_T0093294.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74823837 74938160 - MGP_BALBcJ_P0093294 Lrrc1 protein_coding protein_coding MGP_BALBcJ_T0093295.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74823931 74841507 - Lrrc1 protein_coding processed_transcript MGP_BALBcJ_T0093296.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74823946 74835015 - MGP_BALBcJ_P0093296 Lrrc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093297.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74827912 74835311 - Lrrc1 protein_coding retained_intron MGP_BALBcJ_T0093298.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74841512 74938915 - MGP_BALBcJ_P0093298 Lrrc1 protein_coding protein_coding MGP_BALBcJ_T0093299.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74850883 74893973 - Lrrc1 protein_coding processed_transcript MGP_BALBcJ_T0093300.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74864931 74938913 - Lrrc1 protein_coding processed_transcript MGP_BALBcJ_T0093301.1 MGP_BALBcJ_G0035025.1 mouse_genomes_project 9 74934578 74938855 - Lrrc1 protein_coding retained_intron MGP_BALBcJ_T0091847.1 MGP_BALBcJ_G0034589.1 mouse_genomes_project 9 35812850 35813901 + MGP_BALBcJ_P0091847 Olfr926 protein_coding protein_coding MGP_BALBcJ_T0092409.1 MGP_BALBcJ_G0034801.1 mouse_genomes_project 9 51811532 51827421 + MGP_BALBcJ_P0092409 Dnaja4 protein_coding protein_coding MGP_BALBcJ_T0092410.1 MGP_BALBcJ_G0034801.1 mouse_genomes_project 9 51812173 51821996 + MGP_BALBcJ_P0092410 Dnaja4 protein_coding protein_coding MGP_BALBcJ_T0092411.1 MGP_BALBcJ_G0034801.1 mouse_genomes_project 9 51812218 51828975 + MGP_BALBcJ_P0092411 Dnaja4 protein_coding protein_coding MGP_BALBcJ_T0092300.1 MGP_BALBcJ_G0034764.1 mouse_genomes_project 9 47880262 47884689 + Fdxacb1 protein_coding retained_intron MGP_BALBcJ_T0092301.1 MGP_BALBcJ_G0034764.1 mouse_genomes_project 9 47880275 47883611 + MGP_BALBcJ_P0092301 Fdxacb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092302.1 MGP_BALBcJ_G0034764.1 mouse_genomes_project 9 47880278 47884627 + MGP_BALBcJ_P0092302 Fdxacb1 protein_coding protein_coding MGP_BALBcJ_T0092304.1 MGP_BALBcJ_G0034764.1 mouse_genomes_project 9 47882082 47883557 + MGP_BALBcJ_P0092304 Fdxacb1 protein_coding protein_coding MGP_BALBcJ_T0095099.1 MGP_BALBcJ_G0035362.1 mouse_genomes_project 9 112354970 112430103 + MGP_BALBcJ_P0095099 Glb1 protein_coding protein_coding MGP_BALBcJ_T0005492.1 MGP_BALBcJ_G0004637.1 mouse_genomes_project 9 97216331 97257334 + Gm16004 antisense antisense MGP_BALBcJ_T0095043.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912395 110038550 - MGP_BALBcJ_P0095043 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095044.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912395 110038550 - MGP_BALBcJ_P0095044 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095045.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912395 110036747 - MGP_BALBcJ_P0095045 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095046.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912395 110036518 - MGP_BALBcJ_P0095046 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095047.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912538 110036561 - MGP_BALBcJ_P0095047 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095048.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912540 110084162 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0095049.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912562 110084755 - MGP_BALBcJ_P0095049 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095050.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109912564 110082244 - MGP_BALBcJ_P0095050 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095051.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109913041 110038431 - MGP_BALBcJ_P0095051 Arpp21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095052.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 109966922 110066904 - MGP_BALBcJ_P0095052 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095053.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110004914 110084580 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0095054.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110005927 110084755 - MGP_BALBcJ_P0095054 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095055.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110011770 110066994 - MGP_BALBcJ_P0095055 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095056.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110026429 110083366 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0095057.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110029906 110066969 - MGP_BALBcJ_P0095057 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095058.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110029952 110066969 - MGP_BALBcJ_P0095058 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095059.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110029990 110083554 - MGP_BALBcJ_P0095059 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095060.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110030870 110038710 - MGP_BALBcJ_P0095060 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095061.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110030870 110038713 - MGP_BALBcJ_P0095061 Arpp21 protein_coding protein_coding MGP_BALBcJ_T0095062.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110031810 110038688 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0095063.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110031816 110038733 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095064.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110031845 110038710 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095065.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110033490 110038664 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0095066.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110033520 110036891 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095067.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110033563 110036747 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095068.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110033817 110036734 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0095069.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110036526 110081645 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095070.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110038375 110083611 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095071.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110038412 110085669 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095072.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110038445 110039224 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095073.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110038713 110039258 - Arpp21 protein_coding processed_transcript MGP_BALBcJ_T0095074.1 MGP_BALBcJ_G0035352.1 mouse_genomes_project 9 110054866 110066947 - Arpp21 protein_coding retained_intron MGP_BALBcJ_T0094068.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201505 103241051 + Pik3r4 protein_coding retained_intron MGP_BALBcJ_T0094069.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201508 103203281 + MGP_BALBcJ_P0094069 Pik3r4 protein_coding protein_coding MGP_BALBcJ_T0094070.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201535 103214889 + Pik3r4 protein_coding retained_intron MGP_BALBcJ_T0094071.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201542 103223034 + Pik3r4 protein_coding retained_intron MGP_BALBcJ_T0094072.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201557 103249289 + MGP_BALBcJ_P0094072 Pik3r4 protein_coding protein_coding MGP_BALBcJ_T0094073.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201691 103249414 + MGP_BALBcJ_P0094073 Pik3r4 protein_coding protein_coding MGP_BALBcJ_T0094074.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103201722 103207341 + MGP_BALBcJ_P0094074 Pik3r4 protein_coding protein_coding MGP_BALBcJ_T0094075.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103217602 103228227 + MGP_BALBcJ_P0094075 Pik3r4 protein_coding protein_coding MGP_BALBcJ_T0094076.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103220370 103222574 + Pik3r4 protein_coding retained_intron MGP_BALBcJ_T0094077.1 MGP_BALBcJ_G0035189.1 mouse_genomes_project 9 103243456 103248152 + Pik3r4 protein_coding retained_intron MGP_BALBcJ_T0091889.1 MGP_BALBcJ_G0034625.1 mouse_genomes_project 9 36934358 36937171 - MGP_BALBcJ_P0091889 Olfr976 protein_coding protein_coding MGP_BALBcJ_T0011030.1 MGP_BALBcJ_G0009155.1 mouse_genomes_project 9 25124082 25124179 + Gm44316 miRNA miRNA MGP_BALBcJ_T0091830.1 MGP_BALBcJ_G0034578.1 mouse_genomes_project 9 35591328 35592261 - MGP_BALBcJ_P0091830 Olfr916 protein_coding protein_coding MGP_BALBcJ_T0092545.1 MGP_BALBcJ_G0034844.1 mouse_genomes_project 9 54760621 54767399 + MGP_BALBcJ_P0092545 Ulk3 protein_coding protein_coding MGP_BALBcJ_T0002365.1 MGP_BALBcJ_G0002275.1 mouse_genomes_project 9 69693788 69695347 + TEC TEC MGP_BALBcJ_T0091478.1 MGP_BALBcJ_G0034440.1 mouse_genomes_project 9 18757077 18775447 - MGP_BALBcJ_P0091478 Rgl3 protein_coding protein_coding MGP_BALBcJ_T0094183.1 MGP_BALBcJ_G0035213.1 mouse_genomes_project 9 104198572 104199666 + MGP_BALBcJ_P0094183 Iqcf6 protein_coding protein_coding MGP_BALBcJ_T0092072.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41823898 41843912 + MGP_BALBcJ_P0092072 Ift46 protein_coding protein_coding MGP_BALBcJ_T0092073.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41823923 41833346 + MGP_BALBcJ_P0092073 Ift46 protein_coding protein_coding MGP_BALBcJ_T0092074.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41824014 41837522 + Ift46 protein_coding processed_transcript MGP_BALBcJ_T0092075.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41824017 41825379 + Ift46 protein_coding processed_transcript MGP_BALBcJ_T0092076.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41824063 41835259 + MGP_BALBcJ_P0092076 Ift46 protein_coding protein_coding MGP_BALBcJ_T0092077.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41824226 41833338 + MGP_BALBcJ_P0092077 Ift46 protein_coding protein_coding MGP_BALBcJ_T0092078.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41824663 41833407 + MGP_BALBcJ_P0092078 Ift46 protein_coding protein_coding MGP_BALBcJ_T0092079.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41827715 41842093 + MGP_BALBcJ_P0092079 Ift46 protein_coding protein_coding MGP_BALBcJ_T0092080.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41829096 41833416 + Ift46 protein_coding retained_intron MGP_BALBcJ_T0092081.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41835512 41838762 + Ift46 protein_coding processed_transcript MGP_BALBcJ_T0092082.1 MGP_BALBcJ_G0034690.1 mouse_genomes_project 9 41840641 41841934 + Ift46 protein_coding retained_intron MGP_BALBcJ_T0098683.1 MGP_BALBcJ_G0036737.1 mouse_genomes_project 9 113594313 113594432 - n-R5s92 rRNA rRNA MGP_BALBcJ_T0011074.1 MGP_BALBcJ_G0009199.1 mouse_genomes_project 9 105705416 105705534 - miRNA miRNA MGP_BALBcJ_T0092990.1 MGP_BALBcJ_G0034960.1 mouse_genomes_project 9 65084796 65086290 + MGP_BALBcJ_P0092990 C2cd4b protein_coding protein_coding MGP_BALBcJ_T0005516.1 MGP_BALBcJ_G0004654.1 mouse_genomes_project 9 105142008 105153747 - Gm16343 antisense antisense MGP_BALBcJ_T0095284.1 MGP_BALBcJ_G0035423.1 mouse_genomes_project 9 119824545 119827078 + MGP_BALBcJ_P0095284 Deb1 protein_coding protein_coding MGP_BALBcJ_T0091216.1 MGP_BALBcJ_G0034328.1 mouse_genomes_project 9 11457556 11510527 + MGP_BALBcJ_P0091216 Mre11a protein_coding protein_coding MGP_BALBcJ_T0091217.1 MGP_BALBcJ_G0034328.1 mouse_genomes_project 9 11457578 11513004 + MGP_BALBcJ_P0091217 Mre11a protein_coding protein_coding MGP_BALBcJ_T0091218.1 MGP_BALBcJ_G0034328.1 mouse_genomes_project 9 11457604 11472706 + MGP_BALBcJ_P0091218 Mre11a protein_coding protein_coding MGP_BALBcJ_T0091219.1 MGP_BALBcJ_G0034328.1 mouse_genomes_project 9 11470238 11485206 + MGP_BALBcJ_P0091219 Mre11a protein_coding protein_coding MGP_BALBcJ_T0091220.1 MGP_BALBcJ_G0034328.1 mouse_genomes_project 9 11470251 11476925 + MGP_BALBcJ_P0091220 Mre11a protein_coding protein_coding MGP_BALBcJ_T0098413.1 MGP_BALBcJ_G0036467.1 mouse_genomes_project 9 36656643 36657546 - pseudogene pseudogene MGP_BALBcJ_T0009208.1 MGP_BALBcJ_G0007398.1 mouse_genomes_project 9 37505507 37507984 + Gm17540 lincRNA lincRNA MGP_BALBcJ_T0098775.1 MGP_BALBcJ_G0036829.1 mouse_genomes_project 9 61540733 61540868 + Gm24289 scaRNA scaRNA MGP_BALBcJ_T0100188.1 MGP_BALBcJ_G0038224.1 mouse_genomes_project 9 52676178 52676269 - Gm23407 snRNA snRNA MGP_BALBcJ_T0091995.1 MGP_BALBcJ_G0034665.1 mouse_genomes_project 9 41165390 41169854 + MGP_BALBcJ_P0091995 Mcam protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091996.1 MGP_BALBcJ_G0034665.1 mouse_genomes_project 9 41165571 41173651 + MGP_BALBcJ_P0091996 Mcam protein_coding protein_coding MGP_BALBcJ_T0091997.1 MGP_BALBcJ_G0034665.1 mouse_genomes_project 9 41167465 41168194 + MGP_BALBcJ_P0091997 Mcam protein_coding protein_coding MGP_BALBcJ_T0091998.1 MGP_BALBcJ_G0034665.1 mouse_genomes_project 9 41167782 41170602 + Mcam protein_coding retained_intron MGP_BALBcJ_T0092105.1 MGP_BALBcJ_G0034698.1 mouse_genomes_project 9 42051263 42062148 - MGP_BALBcJ_P0092105 Cd3e protein_coding protein_coding MGP_BALBcJ_T0016057.1 MGP_BALBcJ_G0014154.1 mouse_genomes_project 9 78402129 78403001 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093045.1 MGP_BALBcJ_G0034971.1 mouse_genomes_project 9 67552689 67747204 + MGP_BALBcJ_P0093045 Myo1e protein_coding protein_coding MGP_BALBcJ_T0095124.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114552369 115298224 - MGP_BALBcJ_P0095124 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095125.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114556925 115298240 - MGP_BALBcJ_P0095125 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095126.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114557208 114813331 - MGP_BALBcJ_P0095126 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095127.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114557643 115297887 - MGP_BALBcJ_P0095127 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095128.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114557643 115680738 - MGP_BALBcJ_P0095128 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095129.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114557644 115297878 - MGP_BALBcJ_P0095129 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095130.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114558134 115298244 - MGP_BALBcJ_P0095130 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095131.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114562485 114813344 - MGP_BALBcJ_P0095131 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095132.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114665267 115298243 - Rbms3 protein_coding retained_intron MGP_BALBcJ_T0095133.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114795980 115297562 - MGP_BALBcJ_P0095133 Rbms3 protein_coding protein_coding MGP_BALBcJ_T0095134.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114838440 115298240 - Rbms3 protein_coding processed_transcript MGP_BALBcJ_T0095135.1 MGP_BALBcJ_G0035377.1 mouse_genomes_project 9 114984112 115297358 - Rbms3 protein_coding processed_transcript MGP_BALBcJ_T0005437.1 MGP_BALBcJ_G0004600.1 mouse_genomes_project 9 55298320 55299495 + Gm16131 antisense antisense MGP_BALBcJ_T0092547.1 MGP_BALBcJ_G0034846.1 mouse_genomes_project 9 54778244 54791886 - MGP_BALBcJ_P0092547 Lman1l protein_coding protein_coding MGP_BALBcJ_T0092548.1 MGP_BALBcJ_G0034846.1 mouse_genomes_project 9 54778244 54791886 - MGP_BALBcJ_P0092548 Lman1l protein_coding protein_coding MGP_BALBcJ_T0100184.1 MGP_BALBcJ_G0038220.1 mouse_genomes_project 9 44613866 44613973 - Gm22286 snRNA snRNA MGP_BALBcJ_T0005466.1 MGP_BALBcJ_G0004620.1 mouse_genomes_project 9 79171537 79255004 - Gm26907 antisense antisense MGP_BALBcJ_T0094596.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106117683 106125912 + MGP_BALBcJ_P0094596 Qars protein_coding protein_coding MGP_BALBcJ_T0094597.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106118028 106121058 + Qars protein_coding retained_intron MGP_BALBcJ_T0094598.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106118028 106122169 + Qars protein_coding retained_intron MGP_BALBcJ_T0094599.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106118028 106121042 + Qars protein_coding retained_intron MGP_BALBcJ_T0094600.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106118041 106125907 + MGP_BALBcJ_P0094600 Qars protein_coding protein_coding MGP_BALBcJ_T0094601.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106119449 106125907 + MGP_BALBcJ_P0094601 Qars protein_coding protein_coding MGP_BALBcJ_T0094602.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106121520 106123368 + Qars protein_coding retained_intron MGP_BALBcJ_T0094603.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106121580 106122862 + Qars protein_coding retained_intron MGP_BALBcJ_T0094604.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106123076 106124157 + Qars protein_coding retained_intron MGP_BALBcJ_T0094605.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106123079 106125129 + MGP_BALBcJ_P0094605 Qars protein_coding protein_coding MGP_BALBcJ_T0094606.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106123100 106123934 + Qars protein_coding processed_transcript MGP_BALBcJ_T0094607.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106123514 106124101 + Qars protein_coding retained_intron MGP_BALBcJ_T0094608.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106123696 106124329 + Qars protein_coding retained_intron MGP_BALBcJ_T0094609.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106124034 106125907 + MGP_BALBcJ_P0094609 Qars protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094610.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106124718 106125166 + Qars protein_coding retained_intron MGP_BALBcJ_T0094611.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106124721 106125900 + Qars protein_coding retained_intron MGP_BALBcJ_T0094612.1 MGP_BALBcJ_G0035275.1 mouse_genomes_project 9 106124789 106125907 + Qars protein_coding retained_intron MGP_BALBcJ_T0093181.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70359583 70392442 - MGP_BALBcJ_P0093181 Pigb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093182.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70360645 70367821 - MGP_BALBcJ_P0093182 Pigb protein_coding protein_coding MGP_BALBcJ_T0093184.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70365874 70391763 - MGP_BALBcJ_P0093184 Pigb protein_coding protein_coding MGP_BALBcJ_T0093185.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70366827 70391715 - MGP_BALBcJ_P0093185 Pigb protein_coding protein_coding MGP_BALBcJ_T0093187.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70367859 70391763 - MGP_BALBcJ_P0093187 Pigb protein_coding protein_coding MGP_BALBcJ_T0093188.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70369774 70371368 - Pigb protein_coding retained_intron MGP_BALBcJ_T0093189.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70374508 70388647 - MGP_BALBcJ_P0093189 Pigb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093190.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70381235 70384280 - Pigb protein_coding retained_intron MGP_BALBcJ_T0093191.1 MGP_BALBcJ_G0034997.1 mouse_genomes_project 9 70384838 70386626 - Pigb protein_coding retained_intron MGP_BALBcJ_T0101485.1 MGP_BALBcJ_G0039521.1 mouse_genomes_project 9 79638728 79638859 + Gm23748 snoRNA snoRNA MGP_BALBcJ_T0093170.1 MGP_BALBcJ_G0034994.1 mouse_genomes_project 9 70310991 70368483 + MGP_BALBcJ_P0093170 Gm44503 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0005445.1 MGP_BALBcJ_G0004605.1 mouse_genomes_project 9 64131666 64132502 + Gm17098 antisense antisense MGP_BALBcJ_T0094807.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618322 107629421 + MGP_BALBcJ_P0094807 Nme6 protein_coding protein_coding MGP_BALBcJ_T0094808.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618335 107628985 + MGP_BALBcJ_P0094808 Nme6 protein_coding protein_coding MGP_BALBcJ_T0094809.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618357 107619176 + Nme6 protein_coding retained_intron MGP_BALBcJ_T0094810.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618357 107629331 + Nme6 protein_coding processed_transcript MGP_BALBcJ_T0094811.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618367 107628494 + MGP_BALBcJ_P0094811 Nme6 protein_coding protein_coding MGP_BALBcJ_T0094812.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618372 107629115 + Nme6 protein_coding processed_transcript MGP_BALBcJ_T0094813.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618373 107629412 + Nme6 protein_coding processed_transcript MGP_BALBcJ_T0094814.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618393 107621211 + Nme6 protein_coding retained_intron MGP_BALBcJ_T0094815.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618472 107629042 + MGP_BALBcJ_P0094815 Nme6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094816.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618633 107629036 + Nme6 protein_coding processed_transcript MGP_BALBcJ_T0094817.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618777 107628035 + Nme6 protein_coding retained_intron MGP_BALBcJ_T0094818.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618779 107629003 + Nme6 protein_coding processed_transcript MGP_BALBcJ_T0094819.1 MGP_BALBcJ_G0035313.1 mouse_genomes_project 9 107618877 107629572 + Nme6 protein_coding processed_transcript MGP_BALBcJ_T0100180.1 MGP_BALBcJ_G0038216.1 mouse_genomes_project 9 41515045 41515162 - Gm22540 snRNA snRNA MGP_BALBcJ_T0009316.1 MGP_BALBcJ_G0007482.1 mouse_genomes_project 9 108086776 108091761 - Gm42775 lincRNA lincRNA MGP_BALBcJ_T0095406.1 MGP_BALBcJ_G0035465.1 mouse_genomes_project 9 122156257 122165976 + MGP_BALBcJ_P0095406 Ccr3 protein_coding protein_coding MGP_BALBcJ_T0091384.1 MGP_BALBcJ_G0034403.1 mouse_genomes_project 9 17774942 17781031 + MGP_BALBcJ_P0091384 Mrpl4 protein_coding protein_coding MGP_BALBcJ_T0101442.1 MGP_BALBcJ_G0039478.1 mouse_genomes_project 9 12002527 12002660 + Gm22620 snoRNA snoRNA MGP_BALBcJ_T0011052.1 MGP_BALBcJ_G0009177.1 mouse_genomes_project 9 61467004 61467131 + Gm24106 miRNA miRNA MGP_BALBcJ_T0094540.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105954789 105999562 + MGP_BALBcJ_P0094540 Usp4 protein_coding protein_coding MGP_BALBcJ_T0094541.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105954810 105992949 + MGP_BALBcJ_P0094541 Usp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094542.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105954833 105964774 + Usp4 protein_coding retained_intron MGP_BALBcJ_T0094543.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105954849 105999537 + MGP_BALBcJ_P0094543 Usp4 protein_coding protein_coding MGP_BALBcJ_T0094544.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105963415 105964889 + Usp4 protein_coding processed_transcript MGP_BALBcJ_T0094545.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105966709 105969728 + Usp4 protein_coding retained_intron MGP_BALBcJ_T0094546.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105974786 105977104 + Usp4 protein_coding retained_intron MGP_BALBcJ_T0094547.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105979554 105999276 + MGP_BALBcJ_P0094547 Usp4 protein_coding protein_coding MGP_BALBcJ_T0094548.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105988389 105998809 + MGP_BALBcJ_P0094548 Usp4 protein_coding protein_coding MGP_BALBcJ_T0094549.1 MGP_BALBcJ_G0035267.1 mouse_genomes_project 9 105997892 105999262 + Usp4 protein_coding retained_intron MGP_BALBcJ_T0091555.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23777013 23792742 - Acad8 protein_coding retained_intron MGP_BALBcJ_T0091556.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23777013 23801563 - MGP_BALBcJ_P0091556 Acad8 protein_coding protein_coding MGP_BALBcJ_T0091557.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23777022 23801546 - MGP_BALBcJ_P0091557 Acad8 protein_coding protein_coding MGP_BALBcJ_T0091558.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23778254 23780834 - Acad8 protein_coding retained_intron MGP_BALBcJ_T0091559.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23782077 23801505 - MGP_BALBcJ_P0091559 Acad8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091560.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23782138 23801503 - MGP_BALBcJ_P0091560 Acad8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091561.1 MGP_BALBcJ_G0034472.1 mouse_genomes_project 9 23792711 23801502 - Acad8 protein_coding retained_intron MGP_BALBcJ_T0092107.1 MGP_BALBcJ_G0034700.1 mouse_genomes_project 9 42112025 42134257 + MGP_BALBcJ_P0092107 Mpzl3 protein_coding protein_coding MGP_BALBcJ_T0092108.1 MGP_BALBcJ_G0034700.1 mouse_genomes_project 9 42112027 42122006 + Mpzl3 protein_coding retained_intron MGP_BALBcJ_T0092109.1 MGP_BALBcJ_G0034700.1 mouse_genomes_project 9 42112048 42123297 + MGP_BALBcJ_P0092109 Mpzl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092110.1 MGP_BALBcJ_G0034700.1 mouse_genomes_project 9 42116085 42122490 + Mpzl3 protein_coding retained_intron MGP_BALBcJ_T0092111.1 MGP_BALBcJ_G0034700.1 mouse_genomes_project 9 42127437 42131981 + Mpzl3 protein_coding retained_intron MGP_BALBcJ_T0002354.1 MGP_BALBcJ_G0002264.1 mouse_genomes_project 9 53546621 53548657 - TEC TEC MGP_BALBcJ_T0093873.1 MGP_BALBcJ_G0035154.1 mouse_genomes_project 9 98513025 98567427 - MGP_BALBcJ_P0093873 Pccb protein_coding protein_coding MGP_BALBcJ_T0093874.1 MGP_BALBcJ_G0035154.1 mouse_genomes_project 9 98513025 98567406 - MGP_BALBcJ_P0093874 Pccb protein_coding protein_coding MGP_BALBcJ_T0093875.1 MGP_BALBcJ_G0035154.1 mouse_genomes_project 9 98515360 98516648 - Pccb protein_coding retained_intron MGP_BALBcJ_T0093876.1 MGP_BALBcJ_G0035154.1 mouse_genomes_project 9 98528636 98567401 - MGP_BALBcJ_P0093876 Pccb protein_coding protein_coding MGP_BALBcJ_T0093877.1 MGP_BALBcJ_G0035154.1 mouse_genomes_project 9 98545274 98567390 - Pccb protein_coding processed_transcript MGP_BALBcJ_T0093878.1 MGP_BALBcJ_G0035154.1 mouse_genomes_project 9 98556127 98567410 - MGP_BALBcJ_P0093878 Pccb protein_coding protein_coding MGP_BALBcJ_T0016132.1 MGP_BALBcJ_G0014229.1 mouse_genomes_project 9 118501270 118501697 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101768.1 MGP_BALBcJ_G0039720.1 mouse_genomes_project 9 11522237 11522585 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0091293.1 MGP_BALBcJ_G0034360.1 mouse_genomes_project 9 16051408 16052338 + MGP_BALBcJ_P0091293 protein_coding protein_coding MGP_BALBcJ_T0091855.1 MGP_BALBcJ_G0034597.1 mouse_genomes_project 9 36094241 36095227 + MGP_BALBcJ_P0091855 Olfr27 protein_coding protein_coding MGP_BALBcJ_T0016094.1 MGP_BALBcJ_G0014191.1 mouse_genomes_project 9 94010123 94010817 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091811.1 MGP_BALBcJ_G0034559.1 mouse_genomes_project 9 35131710 35132659 + MGP_BALBcJ_P0091811 Olfr894 protein_coding protein_coding MGP_BALBcJ_T0002349.1 MGP_BALBcJ_G0002259.1 mouse_genomes_project 9 31400102 31401012 + TEC TEC MGP_BALBcJ_T0011733.1 MGP_BALBcJ_G0009858.1 mouse_genomes_project 9 120922157 120922425 + Gm25341 misc_RNA misc_RNA MGP_BALBcJ_T0095423.1 MGP_BALBcJ_G0035470.1 mouse_genomes_project 9 122617037 122625266 - MGP_BALBcJ_P0095423 protein_coding unknown_likely_coding MGP_BALBcJ_T0095424.1 MGP_BALBcJ_G0035470.1 mouse_genomes_project 9 122619304 122619558 - MGP_BALBcJ_P0095424 protein_coding protein_coding MGP_BALBcJ_T0095086.1 MGP_BALBcJ_G0035357.1 mouse_genomes_project 9 111812620 111860001 + MGP_BALBcJ_P0095086 Ubp1 protein_coding protein_coding MGP_BALBcJ_T0095087.1 MGP_BALBcJ_G0035357.1 mouse_genomes_project 9 111812620 111860001 + MGP_BALBcJ_P0095087 Ubp1 protein_coding protein_coding MGP_BALBcJ_T0095088.1 MGP_BALBcJ_G0035357.1 mouse_genomes_project 9 111813305 111859619 + MGP_BALBcJ_P0095088 Ubp1 protein_coding protein_coding MGP_BALBcJ_T0093527.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85749965 85812050 - MGP_BALBcJ_P0093527 Snx14 protein_coding protein_coding MGP_BALBcJ_T0093528.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85749967 85771672 - Snx14 protein_coding retained_intron MGP_BALBcJ_T0093529.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85749967 85811997 - MGP_BALBcJ_P0093529 Snx14 protein_coding protein_coding MGP_BALBcJ_T0093530.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85749979 85812057 - MGP_BALBcJ_P0093530 Snx14 protein_coding protein_coding MGP_BALBcJ_T0093531.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85749982 85812013 - MGP_BALBcJ_P0093531 Snx14 protein_coding protein_coding MGP_BALBcJ_T0093532.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85754759 85812028 - MGP_BALBcJ_P0093532 Snx14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093533.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85765097 85767533 - Snx14 protein_coding retained_intron MGP_BALBcJ_T0093535.1 MGP_BALBcJ_G0035076.1 mouse_genomes_project 9 85792860 85812011 - Snx14 protein_coding retained_intron MGP_BALBcJ_T0094412.1 MGP_BALBcJ_G0035245.1 mouse_genomes_project 9 105480933 105494452 + MGP_BALBcJ_P0094412 Mst1r protein_coding protein_coding MGP_BALBcJ_T0094413.1 MGP_BALBcJ_G0035245.1 mouse_genomes_project 9 105480967 105494450 + MGP_BALBcJ_P0094413 Mst1r protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094414.1 MGP_BALBcJ_G0035245.1 mouse_genomes_project 9 105489072 105489798 + Mst1r protein_coding retained_intron MGP_BALBcJ_T0094415.1 MGP_BALBcJ_G0035245.1 mouse_genomes_project 9 105490293 105490974 + Mst1r protein_coding retained_intron MGP_BALBcJ_T0005520.1 MGP_BALBcJ_G0004658.1 mouse_genomes_project 9 105574096 105578391 - 4930535L15Rik antisense antisense MGP_BALBcJ_T0098668.1 MGP_BALBcJ_G0036722.1 mouse_genomes_project 9 31845428 31845558 + Gm23702 rRNA rRNA MGP_BALBcJ_T0094339.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105217276 105226284 - MGP_BALBcJ_P0094339 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094340.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105217807 105234682 - MGP_BALBcJ_P0094340 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094341.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105217809 105236308 - Slc38a3 protein_coding retained_intron MGP_BALBcJ_T0094342.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105217813 105234734 - MGP_BALBcJ_P0094342 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094343.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105217813 105236273 - MGP_BALBcJ_P0094343 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094344.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105221782 105223397 - MGP_BALBcJ_P0094344 Slc38a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094345.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105221812 105222984 - MGP_BALBcJ_P0094345 Slc38a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094346.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105221832 105222775 - Slc38a3 protein_coding retained_intron MGP_BALBcJ_T0094347.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105223156 105224016 - Slc38a3 protein_coding retained_intron MGP_BALBcJ_T0094348.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105223651 105225974 - Slc38a3 protein_coding processed_transcript MGP_BALBcJ_T0094349.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105224384 105236826 - MGP_BALBcJ_P0094349 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094350.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105224565 105236305 - MGP_BALBcJ_P0094350 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094351.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105225390 105232728 - MGP_BALBcJ_P0094351 Slc38a3 protein_coding protein_coding MGP_BALBcJ_T0094352.1 MGP_BALBcJ_G0035239.1 mouse_genomes_project 9 105225973 105236318 - Slc38a3 protein_coding processed_transcript MGP_BALBcJ_T0011718.1 MGP_BALBcJ_G0009843.1 mouse_genomes_project 9 51648608 51648826 + Gm25980 misc_RNA misc_RNA MGP_BALBcJ_T0002424.1 MGP_BALBcJ_G0002333.1 mouse_genomes_project 9 98400080 98403108 + TEC TEC MGP_BALBcJ_T0098670.1 MGP_BALBcJ_G0036724.1 mouse_genomes_project 9 33896089 33896198 + n-R5s82 rRNA rRNA MGP_BALBcJ_T0016066.1 MGP_BALBcJ_G0014163.1 mouse_genomes_project 9 83709234 83709778 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093090.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69178674 69439779 - MGP_BALBcJ_P0093090 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093091.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69180232 69232347 - Tcf12 protein_coding retained_intron MGP_BALBcJ_T0093092.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69180248 69439753 - MGP_BALBcJ_P0093092 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093093.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69180253 69232657 - MGP_BALBcJ_P0093093 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093094.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69180257 69439738 - MGP_BALBcJ_P0093094 Tcf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093095.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69180703 69439582 - MGP_BALBcJ_P0093095 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093096.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69181492 69439803 - MGP_BALBcJ_P0093096 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093097.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69185876 69232350 - MGP_BALBcJ_P0093097 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093098.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69185879 69439744 - MGP_BALBcJ_P0093098 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093099.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69194600 69439133 - MGP_BALBcJ_P0093099 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093100.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69204342 69220828 - Tcf12 protein_coding processed_transcript MGP_BALBcJ_T0093101.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69212108 69437701 - MGP_BALBcJ_P0093101 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093102.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69212108 69232246 - MGP_BALBcJ_P0093102 Tcf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093103.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69218848 69328556 - MGP_BALBcJ_P0093103 Tcf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093104.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69219238 69328554 - MGP_BALBcJ_P0093104 Tcf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093105.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69219859 69439703 - MGP_BALBcJ_P0093105 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093106.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69219880 69439531 - MGP_BALBcJ_P0093106 Tcf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093107.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69220553 69258397 - MGP_BALBcJ_P0093107 Tcf12 protein_coding protein_coding MGP_BALBcJ_T0093108.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69221331 69439723 - MGP_BALBcJ_P0093108 Tcf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093109.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69277909 69439779 - Tcf12 protein_coding retained_intron MGP_BALBcJ_T0093110.1 MGP_BALBcJ_G0034985.1 mouse_genomes_project 9 69434116 69438458 - Tcf12 protein_coding retained_intron MGP_BALBcJ_T0093208.1 MGP_BALBcJ_G0035003.1 mouse_genomes_project 9 71447745 71480370 + Wdr72 protein_coding processed_transcript MGP_BALBcJ_T0093209.1 MGP_BALBcJ_G0035003.1 mouse_genomes_project 9 71447745 71621089 + MGP_BALBcJ_P0093209 Wdr72 protein_coding protein_coding MGP_BALBcJ_T0093210.1 MGP_BALBcJ_G0035003.1 mouse_genomes_project 9 71447793 71451318 + Wdr72 protein_coding processed_transcript MGP_BALBcJ_T0093211.1 MGP_BALBcJ_G0035003.1 mouse_genomes_project 9 71470643 71619609 + MGP_BALBcJ_P0093211 Wdr72 protein_coding unknown_likely_coding MGP_BALBcJ_T0093212.1 MGP_BALBcJ_G0035003.1 mouse_genomes_project 9 71612003 71621194 + Wdr72 protein_coding processed_transcript MGP_BALBcJ_T0091383.1 MGP_BALBcJ_G0034402.1 mouse_genomes_project 9 17738253 17749085 - MGP_BALBcJ_P0091383 S1pr2 protein_coding protein_coding MGP_BALBcJ_T0016052.1 MGP_BALBcJ_G0014149.1 mouse_genomes_project 9 74946699 74947900 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101773.1 MGP_BALBcJ_G0039723.1 mouse_genomes_project 9 54089206 54089765 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0100189.1 MGP_BALBcJ_G0038225.1 mouse_genomes_project 9 60259533 60259691 + Gm24526 snRNA snRNA MGP_BALBcJ_T0099033.1 MGP_BALBcJ_G0037074.1 mouse_genomes_project 9 105996098 105997222 + Gm37963 sense_intronic sense_intronic MGP_BALBcJ_T0009317.1 MGP_BALBcJ_G0007483.1 mouse_genomes_project 9 108465134 108465911 + Gm42470 lincRNA lincRNA MGP_BALBcJ_T0091829.1 MGP_BALBcJ_G0034577.1 mouse_genomes_project 9 35532114 35533065 + MGP_BALBcJ_P0091829 Olfr914 protein_coding protein_coding MGP_BALBcJ_T0095102.1 MGP_BALBcJ_G0035365.1 mouse_genomes_project 9 112462864 112522027 - MGP_BALBcJ_P0095102 Trim71 protein_coding protein_coding MGP_BALBcJ_T0002454.1 MGP_BALBcJ_G0002363.1 mouse_genomes_project 9 106078713 106079728 + TEC TEC MGP_BALBcJ_T0094536.1 MGP_BALBcJ_G0035266.1 mouse_genomes_project 9 105945234 105946134 + Gpx1 protein_coding retained_intron MGP_BALBcJ_T0094537.1 MGP_BALBcJ_G0035266.1 mouse_genomes_project 9 105945385 105946675 + MGP_BALBcJ_P0094537 Gpx1 protein_coding protein_coding MGP_BALBcJ_T0094538.1 MGP_BALBcJ_G0035266.1 mouse_genomes_project 9 105945574 105946582 + MGP_BALBcJ_P0094538 Gpx1 protein_coding protein_coding MGP_BALBcJ_T0094539.1 MGP_BALBcJ_G0035266.1 mouse_genomes_project 9 105945607 105946582 + MGP_BALBcJ_P0094539 Gpx1 protein_coding protein_coding MGP_BALBcJ_T0094772.1 MGP_BALBcJ_G0035298.1 mouse_genomes_project 9 106648278 106656263 - MGP_BALBcJ_P0094772 Tma7 protein_coding protein_coding MGP_BALBcJ_T0094773.1 MGP_BALBcJ_G0035298.1 mouse_genomes_project 9 106651601 106656472 - MGP_BALBcJ_P0094773 Tma7 protein_coding protein_coding MGP_BALBcJ_T0094774.1 MGP_BALBcJ_G0035298.1 mouse_genomes_project 9 106655948 106656250 - Tma7 protein_coding retained_intron MGP_BALBcJ_T0092666.1 MGP_BALBcJ_G0034879.1 mouse_genomes_project 9 56935784 56952558 - MGP_BALBcJ_P0092666 Senp8 protein_coding protein_coding MGP_BALBcJ_T0092667.1 MGP_BALBcJ_G0034879.1 mouse_genomes_project 9 56935784 56952558 - MGP_BALBcJ_P0092667 Senp8 protein_coding protein_coding MGP_BALBcJ_T0091866.1 MGP_BALBcJ_G0034608.1 mouse_genomes_project 9 36541282 36542337 - MGP_BALBcJ_P0091866 Olfr959 protein_coding protein_coding MGP_BALBcJ_T0092438.1 MGP_BALBcJ_G0034812.1 mouse_genomes_project 9 52320798 52337826 + MGP_BALBcJ_P0092438 Fbxo22 protein_coding protein_coding MGP_BALBcJ_T0092439.1 MGP_BALBcJ_G0034812.1 mouse_genomes_project 9 52320831 52338024 + MGP_BALBcJ_P0092439 Fbxo22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092440.1 MGP_BALBcJ_G0034812.1 mouse_genomes_project 9 52320833 52338017 + MGP_BALBcJ_P0092440 Fbxo22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092441.1 MGP_BALBcJ_G0034812.1 mouse_genomes_project 9 52325508 52333828 + MGP_BALBcJ_P0092441 Fbxo22 protein_coding protein_coding MGP_BALBcJ_T0092240.1 MGP_BALBcJ_G0034745.1 mouse_genomes_project 9 46522680 46534212 - MGP_BALBcJ_P0092240 Ankk1 protein_coding protein_coding MGP_BALBcJ_T0016131.1 MGP_BALBcJ_G0014228.1 mouse_genomes_project 9 118429902 118431817 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094555.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057008 106070949 - MGP_BALBcJ_P0094555 Klhdc8b protein_coding protein_coding MGP_BALBcJ_T0094556.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057030 106062083 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0094557.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057030 106060169 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0094558.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057030 106061742 - MGP_BALBcJ_P0094558 Klhdc8b protein_coding protein_coding MGP_BALBcJ_T0094559.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057204 106061769 - MGP_BALBcJ_P0094559 Klhdc8b protein_coding protein_coding MGP_BALBcJ_T0094560.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057345 106070444 - MGP_BALBcJ_P0094560 Klhdc8b protein_coding protein_coding MGP_BALBcJ_T0094561.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106057640 106059734 - Klhdc8b protein_coding processed_transcript MGP_BALBcJ_T0094562.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106060619 106062131 - Klhdc8b protein_coding processed_transcript MGP_BALBcJ_T0094563.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106060640 106062166 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0094564.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106061952 106070297 - Klhdc8b protein_coding processed_transcript MGP_BALBcJ_T0094565.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106064037 106070297 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0094566.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106064039 106066318 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0094567.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106064230 106070441 - Klhdc8b protein_coding processed_transcript MGP_BALBcJ_T0094568.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106067803 106069446 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0094569.1 MGP_BALBcJ_G0035271.1 mouse_genomes_project 9 106068600 106070296 - Klhdc8b protein_coding retained_intron MGP_BALBcJ_T0002409.1 MGP_BALBcJ_G0002318.1 mouse_genomes_project 9 89196818 89197643 - TEC TEC MGP_BALBcJ_T0094790.1 MGP_BALBcJ_G0035305.1 mouse_genomes_project 9 106849968 107039621 - MGP_BALBcJ_P0094790 protein_coding protein_coding MGP_BALBcJ_T0094791.1 MGP_BALBcJ_G0035305.1 mouse_genomes_project 9 106850014 107425307 - MGP_BALBcJ_P0094791 protein_coding protein_coding MGP_BALBcJ_T0094792.1 MGP_BALBcJ_G0035305.1 mouse_genomes_project 9 106850304 107425302 - MGP_BALBcJ_P0094792 protein_coding protein_coding MGP_BALBcJ_T0094798.1 MGP_BALBcJ_G0035305.1 mouse_genomes_project 9 107056650 107487997 - MGP_BALBcJ_P0094798 protein_coding protein_coding MGP_BALBcJ_T0015995.1 MGP_BALBcJ_G0014092.1 mouse_genomes_project 9 19469890 19470796 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100206.1 MGP_BALBcJ_G0038242.1 mouse_genomes_project 9 71701909 71702024 + Gm24141 snRNA snRNA MGP_BALBcJ_T0011723.1 MGP_BALBcJ_G0009848.1 mouse_genomes_project 9 87469474 87469742 + Gm23759 misc_RNA misc_RNA MGP_BALBcJ_T0016013.1 MGP_BALBcJ_G0014110.1 mouse_genomes_project 9 45544318 45545360 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094257.1 MGP_BALBcJ_G0035226.1 mouse_genomes_project 9 105100203 105104936 + MGP_BALBcJ_P0094257 Tmem115 protein_coding protein_coding MGP_BALBcJ_T0009274.1 MGP_BALBcJ_G0007451.1 mouse_genomes_project 9 88834733 88997134 + Gm29478 lincRNA lincRNA MGP_BALBcJ_T0092493.1 MGP_BALBcJ_G0034828.1 mouse_genomes_project 9 54089174 54090098 + MGP_BALBcJ_P0092493 Imp3 protein_coding protein_coding MGP_BALBcJ_T0092773.1 MGP_BALBcJ_G0034904.1 mouse_genomes_project 9 60837618 60876745 + MGP_BALBcJ_P0092773 Aagab protein_coding protein_coding MGP_BALBcJ_T0091554.1 MGP_BALBcJ_G0034471.1 mouse_genomes_project 9 23684588 23722168 - MGP_BALBcJ_P0091554 Gm1110 protein_coding protein_coding MGP_BALBcJ_T0091521.1 MGP_BALBcJ_G0034460.1 mouse_genomes_project 9 20909913 21102360 + MGP_BALBcJ_P0091521 Npsr1 protein_coding protein_coding MGP_BALBcJ_T0091522.1 MGP_BALBcJ_G0034460.1 mouse_genomes_project 9 20909935 21128723 + MGP_BALBcJ_P0091522 Npsr1 protein_coding protein_coding MGP_BALBcJ_T0091523.1 MGP_BALBcJ_G0034460.1 mouse_genomes_project 9 21070068 21126138 + MGP_BALBcJ_P0091523 Npsr1 protein_coding protein_coding MGP_BALBcJ_T0091524.1 MGP_BALBcJ_G0034460.1 mouse_genomes_project 9 21112718 21127196 + Npsr1 protein_coding processed_transcript MGP_BALBcJ_T0016120.1 MGP_BALBcJ_G0014217.1 mouse_genomes_project 9 104762074 104763343 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009319.1 MGP_BALBcJ_G0007485.1 mouse_genomes_project 9 110077297 110077961 + 2310075C17Rik lincRNA lincRNA MGP_BALBcJ_T0092101.1 MGP_BALBcJ_G0034696.1 mouse_genomes_project 9 42021261 42032259 - MGP_BALBcJ_P0092101 Cd3g protein_coding protein_coding MGP_BALBcJ_T0092102.1 MGP_BALBcJ_G0034696.1 mouse_genomes_project 9 42021443 42022507 - Cd3g protein_coding retained_intron MGP_BALBcJ_T0092103.1 MGP_BALBcJ_G0034696.1 mouse_genomes_project 9 42025311 42032259 - MGP_BALBcJ_P0092103 Cd3g protein_coding protein_coding MGP_BALBcJ_T0101486.1 MGP_BALBcJ_G0039522.1 mouse_genomes_project 9 82894836 82894972 + Gm25125 snoRNA snoRNA MGP_BALBcJ_T0011713.1 MGP_BALBcJ_G0009838.1 mouse_genomes_project 9 15298888 15299194 + Gm25295 misc_RNA misc_RNA MGP_BALBcJ_T0016097.1 MGP_BALBcJ_G0014194.1 mouse_genomes_project 9 94514330 94514631 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094203.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104420376 104473624 - MGP_BALBcJ_P0094203 Manf protein_coding protein_coding MGP_BALBcJ_T0094205.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104451715 104472036 - MGP_BALBcJ_P0094205 Manf protein_coding protein_coding MGP_BALBcJ_T0094209.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104469168 104473731 - MGP_BALBcJ_P0094209 Manf protein_coding protein_coding MGP_BALBcJ_T0094210.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104470506 104473167 - MGP_BALBcJ_P0094210 Manf protein_coding protein_coding MGP_BALBcJ_T0094211.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104470837 104473622 - MGP_BALBcJ_P0094211 Manf protein_coding protein_coding MGP_BALBcJ_T0094212.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104471783 104473667 - Manf protein_coding retained_intron MGP_BALBcJ_T0094213.1 MGP_BALBcJ_G0035218.1 mouse_genomes_project 9 104472315 104473669 - Manf protein_coding retained_intron MGP_BALBcJ_T0011020.1 MGP_BALBcJ_G0009145.1 mouse_genomes_project 9 12002180 12002247 + miRNA miRNA MGP_BALBcJ_T0093578.1 MGP_BALBcJ_G0035090.1 mouse_genomes_project 9 87162053 87175274 - MGP_BALBcJ_P0093578 Ankrd34c protein_coding protein_coding MGP_BALBcJ_T0093579.1 MGP_BALBcJ_G0035090.1 mouse_genomes_project 9 87165285 87175244 - MGP_BALBcJ_P0093579 Ankrd34c protein_coding protein_coding MGP_BALBcJ_T0009288.1 MGP_BALBcJ_G0007460.1 mouse_genomes_project 9 94547900 94553734 + Gm26767 lincRNA lincRNA MGP_BALBcJ_T0101470.1 MGP_BALBcJ_G0039506.1 mouse_genomes_project 9 61415441 61415509 + Gm23344 snoRNA snoRNA MGP_BALBcJ_T0091999.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41181986 41270285 - MGP_BALBcJ_P0091999 Cbl protein_coding protein_coding MGP_BALBcJ_T0092000.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41181987 41270225 - MGP_BALBcJ_P0092000 Cbl protein_coding protein_coding MGP_BALBcJ_T0092001.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41181992 41185740 - Cbl protein_coding processed_transcript MGP_BALBcJ_T0092002.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41189509 41270220 - MGP_BALBcJ_P0092002 Cbl protein_coding protein_coding MGP_BALBcJ_T0092003.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41193688 41194888 - MGP_BALBcJ_P0092003 Cbl protein_coding protein_coding MGP_BALBcJ_T0092004.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41194247 41194861 - Cbl protein_coding retained_intron MGP_BALBcJ_T0092005.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41194407 41197687 - Cbl protein_coding retained_intron MGP_BALBcJ_T0092006.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41201180 41205073 - MGP_BALBcJ_P0092006 Cbl protein_coding protein_coding MGP_BALBcJ_T0092007.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41209959 41227253 - Cbl protein_coding processed_transcript MGP_BALBcJ_T0092008.1 MGP_BALBcJ_G0034666.1 mouse_genomes_project 9 41214309 41269780 - MGP_BALBcJ_P0092008 Cbl protein_coding protein_coding MGP_BALBcJ_T0094087.1 MGP_BALBcJ_G0035193.1 mouse_genomes_project 9 103730640 103735755 - MGP_BALBcJ_P0094087 protein_coding unknown_likely_coding MGP_BALBcJ_T0094088.1 MGP_BALBcJ_G0035193.1 mouse_genomes_project 9 103732694 103733521 - MGP_BALBcJ_P0094088 protein_coding protein_coding MGP_BALBcJ_T0094089.1 MGP_BALBcJ_G0035193.1 mouse_genomes_project 9 103732993 103733514 - MGP_BALBcJ_P0094089 protein_coding protein_coding MGP_BALBcJ_T0092835.1 MGP_BALBcJ_G0034918.1 mouse_genomes_project 9 62172382 62201129 - MGP_BALBcJ_P0092835 Slc24a1 protein_coding protein_coding MGP_BALBcJ_T0018513.1 MGP_BALBcJ_G0015685.1 mouse_genomes_project 9 77210961 77220556 + 4930429F24Rik processed_transcript processed_transcript MGP_BALBcJ_T0093438.1 MGP_BALBcJ_G0035057.1 mouse_genomes_project 9 81202703 81229932 - MGP_BALBcJ_P0093438 Elovl4 protein_coding protein_coding MGP_BALBcJ_T0093439.1 MGP_BALBcJ_G0035057.1 mouse_genomes_project 9 81204673 81229957 - MGP_BALBcJ_P0093439 Elovl4 protein_coding protein_coding MGP_BALBcJ_T0101480.1 MGP_BALBcJ_G0039516.1 mouse_genomes_project 9 67818493 67818606 + Gm24615 snoRNA snoRNA MGP_BALBcJ_T0100208.1 MGP_BALBcJ_G0038244.1 mouse_genomes_project 9 79827438 79827499 - Gm22836 snRNA snRNA MGP_BALBcJ_T0002403.1 MGP_BALBcJ_G0002312.1 mouse_genomes_project 9 88565900 88567935 - TEC TEC MGP_BALBcJ_T0100211.1 MGP_BALBcJ_G0038247.1 mouse_genomes_project 9 82068638 82068802 + Gm26126 snRNA snRNA MGP_BALBcJ_T0094955.1 MGP_BALBcJ_G0035331.1 mouse_genomes_project 9 108551337 108579284 + MGP_BALBcJ_P0094955 Myl3 protein_coding protein_coding MGP_BALBcJ_T0094956.1 MGP_BALBcJ_G0035331.1 mouse_genomes_project 9 108573198 108579579 + MGP_BALBcJ_P0094956 Myl3 protein_coding protein_coding MGP_BALBcJ_T0094957.1 MGP_BALBcJ_G0035331.1 mouse_genomes_project 9 108578565 108579928 + Myl3 protein_coding retained_intron MGP_BALBcJ_T0093497.1 MGP_BALBcJ_G0035068.1 mouse_genomes_project 9 84175021 84191186 + MGP_BALBcJ_P0093497 Prss35 protein_coding protein_coding MGP_BALBcJ_T0093498.1 MGP_BALBcJ_G0035068.1 mouse_genomes_project 9 84175021 84191357 + MGP_BALBcJ_P0093498 Prss35 protein_coding protein_coding MGP_BALBcJ_T0091813.1 MGP_BALBcJ_G0034561.1 mouse_genomes_project 9 35179175 35180126 + MGP_BALBcJ_P0091813 Olfr895 protein_coding protein_coding MGP_BALBcJ_T0009199.1 MGP_BALBcJ_G0007391.1 mouse_genomes_project 9 30863203 30879147 + lincRNA lincRNA MGP_BALBcJ_T0095374.1 MGP_BALBcJ_G0035456.1 mouse_genomes_project 9 121735796 121767866 - Slc6a20b protein_coding retained_intron MGP_BALBcJ_T0095375.1 MGP_BALBcJ_G0035456.1 mouse_genomes_project 9 121735799 121768032 - MGP_BALBcJ_P0095375 Slc6a20b protein_coding protein_coding MGP_BALBcJ_T0095376.1 MGP_BALBcJ_G0035456.1 mouse_genomes_project 9 121736799 121764031 - Slc6a20b protein_coding processed_transcript MGP_BALBcJ_T0095377.1 MGP_BALBcJ_G0035456.1 mouse_genomes_project 9 121736805 121767794 - MGP_BALBcJ_P0095377 Slc6a20b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095378.1 MGP_BALBcJ_G0035456.1 mouse_genomes_project 9 121750054 121767750 - MGP_BALBcJ_P0095378 Slc6a20b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095379.1 MGP_BALBcJ_G0035456.1 mouse_genomes_project 9 121751658 121767968 - Slc6a20b protein_coding processed_transcript MGP_BALBcJ_T0093196.1 MGP_BALBcJ_G0034999.1 mouse_genomes_project 9 70454411 70455463 + MGP_BALBcJ_P0093196 Khdc3 protein_coding protein_coding MGP_BALBcJ_T0093197.1 MGP_BALBcJ_G0034999.1 mouse_genomes_project 9 70454973 70457014 + MGP_BALBcJ_P0093197 Khdc3 protein_coding protein_coding MGP_BALBcJ_T0093198.1 MGP_BALBcJ_G0034999.1 mouse_genomes_project 9 70454973 70457014 + MGP_BALBcJ_P0093198 Khdc3 protein_coding protein_coding MGP_BALBcJ_T0093200.1 MGP_BALBcJ_G0034999.1 mouse_genomes_project 9 70455085 70456768 + MGP_BALBcJ_P0093200 Khdc3 protein_coding protein_coding MGP_BALBcJ_T0101500.1 MGP_BALBcJ_G0039536.1 mouse_genomes_project 9 104733502 104733632 + Gm23595 snoRNA snoRNA MGP_BALBcJ_T0092864.1 MGP_BALBcJ_G0034934.1 mouse_genomes_project 9 62762617 62781346 - MGP_BALBcJ_P0092864 Ankdd1a protein_coding unknown_likely_coding MGP_BALBcJ_T0092865.1 MGP_BALBcJ_G0034934.1 mouse_genomes_project 9 62762617 62778164 - MGP_BALBcJ_P0092865 Ankdd1a protein_coding protein_coding MGP_BALBcJ_T0092866.1 MGP_BALBcJ_G0034934.1 mouse_genomes_project 9 62762617 62782122 - MGP_BALBcJ_P0092866 Ankdd1a protein_coding unknown_likely_coding MGP_BALBcJ_T0002429.1 MGP_BALBcJ_G0002338.1 mouse_genomes_project 9 98718389 98719743 - TEC TEC MGP_BALBcJ_T0092403.1 MGP_BALBcJ_G0034799.1 mouse_genomes_project 9 51698691 51717092 + MGP_BALBcJ_P0092403 Idh3a protein_coding protein_coding MGP_BALBcJ_T0091288.1 MGP_BALBcJ_G0034355.1 mouse_genomes_project 9 15686843 15687782 + MGP_BALBcJ_P0091288 Olfr832 protein_coding protein_coding MGP_BALBcJ_T0016018.1 MGP_BALBcJ_G0014115.1 mouse_genomes_project 9 56331535 56332069 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094117.1 MGP_BALBcJ_G0035200.1 mouse_genomes_project 9 103948589 103956484 + MGP_BALBcJ_P0094117 Dusp7 protein_coding protein_coding MGP_BALBcJ_T0094118.1 MGP_BALBcJ_G0035200.1 mouse_genomes_project 9 103949566 103950823 + Dusp7 protein_coding processed_transcript MGP_BALBcJ_T0094119.1 MGP_BALBcJ_G0035200.1 mouse_genomes_project 9 103950691 103953812 + MGP_BALBcJ_P0094119 Dusp7 protein_coding protein_coding MGP_BALBcJ_T0094120.1 MGP_BALBcJ_G0035200.1 mouse_genomes_project 9 103954584 103956481 + Dusp7 protein_coding processed_transcript MGP_BALBcJ_T0093254.1 MGP_BALBcJ_G0035014.1 mouse_genomes_project 9 72838019 72899514 - MGP_BALBcJ_P0093254 Tmod3 protein_coding protein_coding MGP_BALBcJ_T0094802.1 MGP_BALBcJ_G0035310.1 mouse_genomes_project 9 107318095 107387738 - MGP_BALBcJ_P0094802 Fbxw24 protein_coding protein_coding MGP_BALBcJ_T0011056.1 MGP_BALBcJ_G0009181.1 mouse_genomes_project 9 65052253 65052317 - Mir7241 miRNA miRNA MGP_BALBcJ_T0091810.1 MGP_BALBcJ_G0034558.1 mouse_genomes_project 9 35121853 35122795 + MGP_BALBcJ_P0091810 Olfr893 protein_coding protein_coding MGP_BALBcJ_T0009239.1 MGP_BALBcJ_G0007422.1 mouse_genomes_project 9 65555968 65556340 + Gm28195 lincRNA lincRNA MGP_BALBcJ_T0016098.1 MGP_BALBcJ_G0014195.1 mouse_genomes_project 9 94699541 94701378 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094122.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104014903 104020216 - MGP_BALBcJ_P0094122 Acy1 protein_coding protein_coding MGP_BALBcJ_T0094123.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104014906 104020074 - Acy1 protein_coding retained_intron MGP_BALBcJ_T0094124.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104014912 104016616 - Acy1 protein_coding retained_intron MGP_BALBcJ_T0094125.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104016621 104018278 - Acy1 protein_coding retained_intron MGP_BALBcJ_T0094126.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104016861 104020099 - MGP_BALBcJ_P0094126 Acy1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094127.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104016992 104020216 - MGP_BALBcJ_P0094127 Acy1 protein_coding protein_coding MGP_BALBcJ_T0094128.1 MGP_BALBcJ_G0035202.1 mouse_genomes_project 9 104018793 104020084 - MGP_BALBcJ_P0094128 Acy1 protein_coding protein_coding MGP_BALBcJ_T0100166.1 MGP_BALBcJ_G0038202.1 mouse_genomes_project 9 10000728 10000835 + Gm26189 snRNA snRNA MGP_BALBcJ_T0094646.1 MGP_BALBcJ_G0035280.1 mouse_genomes_project 9 106184007 106190431 - MGP_BALBcJ_P0094646 Wdr6 protein_coding protein_coding MGP_BALBcJ_T0091616.1 MGP_BALBcJ_G0034490.1 mouse_genomes_project 9 28700817 28769760 - MGP_BALBcJ_P0091616 Barx2 protein_coding protein_coding MGP_BALBcJ_T0016033.1 MGP_BALBcJ_G0014130.1 mouse_genomes_project 9 69772788 69773204 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091309.1 MGP_BALBcJ_G0034376.1 mouse_genomes_project 9 16681512 16686794 + MGP_BALBcJ_P0091309 Olfr77 protein_coding protein_coding MGP_BALBcJ_T0100221.1 MGP_BALBcJ_G0038257.1 mouse_genomes_project 9 103232691 103232778 - Gm22720 snRNA snRNA MGP_BALBcJ_T0009194.1 MGP_BALBcJ_G0007386.1 mouse_genomes_project 9 23996482 23997123 - Gm29172 lincRNA lincRNA MGP_BALBcJ_T0095205.1 MGP_BALBcJ_G0035397.1 mouse_genomes_project 9 117545771 117567066 + MGP_BALBcJ_P0095205 Exog protein_coding protein_coding MGP_BALBcJ_T0095206.1 MGP_BALBcJ_G0035397.1 mouse_genomes_project 9 117545799 117565779 + MGP_BALBcJ_P0095206 Exog protein_coding protein_coding MGP_BALBcJ_T0093922.1 MGP_BALBcJ_G0035163.1 mouse_genomes_project 9 100282529 100299783 + MGP_BALBcJ_P0093922 Gm5627 protein_coding protein_coding MGP_BALBcJ_T0092676.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57144069 57161905 - Nr2e3 protein_coding retained_intron MGP_BALBcJ_T0092677.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57144069 57151333 - Nr2e3 protein_coding retained_intron MGP_BALBcJ_T0092678.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57144069 57151416 - MGP_BALBcJ_P0092678 Nr2e3 protein_coding protein_coding MGP_BALBcJ_T0092679.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57144285 57151409 - Nr2e3 protein_coding retained_intron MGP_BALBcJ_T0092680.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57144426 57151373 - Nr2e3 protein_coding retained_intron MGP_BALBcJ_T0092681.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57148048 57150090 - Nr2e3 protein_coding retained_intron MGP_BALBcJ_T0092682.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57148669 57150693 - Nr2e3 protein_coding processed_transcript MGP_BALBcJ_T0092683.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57149896 57161901 - Nr2e3 protein_coding processed_transcript MGP_BALBcJ_T0092684.1 MGP_BALBcJ_G0034881.1 mouse_genomes_project 9 57150016 57151373 - Nr2e3 protein_coding retained_intron MGP_BALBcJ_T0016081.1 MGP_BALBcJ_G0014178.1 mouse_genomes_project 9 88655448 88655871 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091295.1 MGP_BALBcJ_G0034362.1 mouse_genomes_project 9 16094326 16095268 - MGP_BALBcJ_P0091295 Olfr846 protein_coding protein_coding MGP_BALBcJ_T0092357.1 MGP_BALBcJ_G0034781.1 mouse_genomes_project 9 50420991 50501382 + MGP_BALBcJ_P0092357 Exph5 protein_coding unknown_likely_coding MGP_BALBcJ_T0092358.1 MGP_BALBcJ_G0034781.1 mouse_genomes_project 9 50460628 50489171 + Exph5 protein_coding retained_intron MGP_BALBcJ_T0092359.1 MGP_BALBcJ_G0034781.1 mouse_genomes_project 9 50460733 50475183 + Exph5 protein_coding retained_intron MGP_BALBcJ_T0094093.1 MGP_BALBcJ_G0035195.1 mouse_genomes_project 9 103771351 103776552 - MGP_BALBcJ_P0094093 Ppm1m protein_coding protein_coding MGP_BALBcJ_T0094094.1 MGP_BALBcJ_G0035195.1 mouse_genomes_project 9 103771351 103776199 - MGP_BALBcJ_P0094094 Ppm1m protein_coding protein_coding MGP_BALBcJ_T0094095.1 MGP_BALBcJ_G0035195.1 mouse_genomes_project 9 103772126 103774077 - MGP_BALBcJ_P0094095 Ppm1m protein_coding protein_coding MGP_BALBcJ_T0094096.1 MGP_BALBcJ_G0035195.1 mouse_genomes_project 9 103774723 103775547 - Ppm1m protein_coding retained_intron MGP_BALBcJ_T0094097.1 MGP_BALBcJ_G0035195.1 mouse_genomes_project 9 103775133 103777019 - Ppm1m protein_coding processed_transcript MGP_BALBcJ_T0011071.1 MGP_BALBcJ_G0009196.1 mouse_genomes_project 9 103754314 103754402 + Mirlet7g miRNA miRNA MGP_BALBcJ_T0091861.1 MGP_BALBcJ_G0034603.1 mouse_genomes_project 9 36350154 36351185 + MGP_BALBcJ_P0091861 Olfr951 protein_coding protein_coding MGP_BALBcJ_T0091943.1 MGP_BALBcJ_G0034647.1 mouse_genomes_project 9 39244098 39254283 - MGP_BALBcJ_P0091943 Sc5d protein_coding protein_coding MGP_BALBcJ_T0091944.1 MGP_BALBcJ_G0034647.1 mouse_genomes_project 9 39244666 39254183 - MGP_BALBcJ_P0091944 Sc5d protein_coding protein_coding MGP_BALBcJ_T0011078.1 MGP_BALBcJ_G0009203.1 mouse_genomes_project 9 106462473 106462559 + Gm23156 miRNA miRNA MGP_BALBcJ_T0093515.1 MGP_BALBcJ_G0035072.1 mouse_genomes_project 9 84565578 84601510 + MGP_BALBcJ_P0093515 Mrap2 protein_coding protein_coding MGP_BALBcJ_T0093516.1 MGP_BALBcJ_G0035072.1 mouse_genomes_project 9 84565578 84601510 + MGP_BALBcJ_P0093516 Mrap2 protein_coding protein_coding MGP_BALBcJ_T0093517.1 MGP_BALBcJ_G0035072.1 mouse_genomes_project 9 84565615 84601510 + MGP_BALBcJ_P0093517 Mrap2 protein_coding protein_coding MGP_BALBcJ_T0091525.1 MGP_BALBcJ_G0034461.1 mouse_genomes_project 9 21227250 21304257 - MGP_BALBcJ_P0091525 Dpy19l1 protein_coding protein_coding MGP_BALBcJ_T0091526.1 MGP_BALBcJ_G0034461.1 mouse_genomes_project 9 21227252 21319567 - MGP_BALBcJ_P0091526 Dpy19l1 protein_coding protein_coding MGP_BALBcJ_T0091527.1 MGP_BALBcJ_G0034461.1 mouse_genomes_project 9 21227277 21319567 - MGP_BALBcJ_P0091527 Dpy19l1 protein_coding protein_coding MGP_BALBcJ_T0091528.1 MGP_BALBcJ_G0034461.1 mouse_genomes_project 9 21227525 21239307 - Dpy19l1 protein_coding retained_intron MGP_BALBcJ_T0091529.1 MGP_BALBcJ_G0034461.1 mouse_genomes_project 9 21237636 21241766 - Dpy19l1 protein_coding retained_intron MGP_BALBcJ_T0091530.1 MGP_BALBcJ_G0034461.1 mouse_genomes_project 9 21298321 21313599 - Dpy19l1 protein_coding processed_transcript MGP_BALBcJ_T0091808.1 MGP_BALBcJ_G0034556.1 mouse_genomes_project 9 35057170 35058115 + MGP_BALBcJ_P0091808 Olfr890 protein_coding protein_coding MGP_BALBcJ_T0094286.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105134177 105139007 + MGP_BALBcJ_P0094286 Hyal2 protein_coding protein_coding MGP_BALBcJ_T0094287.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105134177 105136622 + MGP_BALBcJ_P0094287 Hyal2 protein_coding protein_coding MGP_BALBcJ_T0094288.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105135344 105139004 + MGP_BALBcJ_P0094288 Hyal2 protein_coding protein_coding MGP_BALBcJ_T0094289.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105135368 105138191 + MGP_BALBcJ_P0094289 Hyal2 protein_coding protein_coding MGP_BALBcJ_T0094290.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105135622 105136840 + MGP_BALBcJ_P0094290 Hyal2 protein_coding protein_coding MGP_BALBcJ_T0094291.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105136032 105139000 + MGP_BALBcJ_P0094291 Hyal2 protein_coding protein_coding MGP_BALBcJ_T0094292.1 MGP_BALBcJ_G0035232.1 mouse_genomes_project 9 105137437 105138431 + Hyal2 protein_coding retained_intron MGP_BALBcJ_T0092987.1 MGP_BALBcJ_G0034959.1 mouse_genomes_project 9 64516911 64709824 - MGP_BALBcJ_P0092987 Tln2 protein_coding unknown_likely_coding MGP_BALBcJ_T0092988.1 MGP_BALBcJ_G0034959.1 mouse_genomes_project 9 64516919 64873641 - MGP_BALBcJ_P0092988 Tln2 protein_coding protein_coding MGP_BALBcJ_T0092989.1 MGP_BALBcJ_G0034959.1 mouse_genomes_project 9 64520937 64854419 - MGP_BALBcJ_P0092989 Tln2 protein_coding protein_coding MGP_BALBcJ_T0091491.1 MGP_BALBcJ_G0034446.1 mouse_genomes_project 9 18885253 18895791 + MGP_BALBcJ_P0091491 Cnn1 protein_coding protein_coding MGP_BALBcJ_T0092763.1 MGP_BALBcJ_G0034902.1 mouse_genomes_project 9 60628643 60633024 - 2300009A05Rik protein_coding processed_transcript MGP_BALBcJ_T0092764.1 MGP_BALBcJ_G0034902.1 mouse_genomes_project 9 60628643 60633438 - MGP_BALBcJ_P0092764 2300009A05Rik protein_coding protein_coding MGP_BALBcJ_T0092765.1 MGP_BALBcJ_G0034902.1 mouse_genomes_project 9 60628644 60633024 - 2300009A05Rik protein_coding processed_transcript MGP_BALBcJ_T0092766.1 MGP_BALBcJ_G0034902.1 mouse_genomes_project 9 60631672 60633443 - 2300009A05Rik protein_coding retained_intron MGP_BALBcJ_T0095260.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119094429 119243076 - Ulk4 protein_coding processed_transcript MGP_BALBcJ_T0095261.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119098615 119174830 - Ulk4 protein_coding retained_intron MGP_BALBcJ_T0095262.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119098615 119393583 - MGP_BALBcJ_P0095262 Ulk4 protein_coding protein_coding MGP_BALBcJ_T0095263.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119100565 119393556 - MGP_BALBcJ_P0095263 Ulk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095264.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119205162 119393567 - MGP_BALBcJ_P0095264 Ulk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095265.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119205166 119393558 - MGP_BALBcJ_P0095265 Ulk4 protein_coding protein_coding MGP_BALBcJ_T0095266.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119236971 119393583 - Ulk4 protein_coding retained_intron MGP_BALBcJ_T0095267.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119293537 119374354 - MGP_BALBcJ_P0095267 Ulk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095268.1 MGP_BALBcJ_G0035417.1 mouse_genomes_project 9 119297026 119324743 - Ulk4 protein_coding processed_transcript MGP_BALBcJ_T0092863.1 MGP_BALBcJ_G0034933.1 mouse_genomes_project 9 62721447 62749253 + MGP_BALBcJ_P0092863 Spg21 protein_coding protein_coding MGP_BALBcJ_T0093881.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98640047 98784655 - MGP_BALBcJ_P0093881 Ppp2r3a protein_coding protein_coding MGP_BALBcJ_T0093882.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98640249 98731107 - MGP_BALBcJ_P0093882 Ppp2r3a protein_coding protein_coding MGP_BALBcJ_T0093883.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98642846 98660344 - Ppp2r3a protein_coding processed_transcript MGP_BALBcJ_T0093884.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98659463 98730885 - Ppp2r3a protein_coding retained_intron MGP_BALBcJ_T0093885.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98724419 98731039 - Ppp2r3a protein_coding retained_intron MGP_BALBcJ_T0093886.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98729500 98732578 - Ppp2r3a protein_coding retained_intron MGP_BALBcJ_T0093887.1 MGP_BALBcJ_G0035156.1 mouse_genomes_project 9 98738206 98743852 - Ppp2r3a protein_coding processed_transcript MGP_BALBcJ_T0100178.1 MGP_BALBcJ_G0038214.1 mouse_genomes_project 9 38328396 38328502 - Gm25401 snRNA snRNA MGP_BALBcJ_T0093954.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100852573 100898414 + MGP_BALBcJ_P0093954 Topbp1 protein_coding protein_coding MGP_BALBcJ_T0093955.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100852589 100853356 + Topbp1 protein_coding retained_intron MGP_BALBcJ_T0093956.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100852861 100858898 + MGP_BALBcJ_P0093956 Topbp1 protein_coding protein_coding MGP_BALBcJ_T0093957.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100875130 100884328 + Topbp1 protein_coding retained_intron MGP_BALBcJ_T0093958.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100875156 100876958 + Topbp1 protein_coding retained_intron MGP_BALBcJ_T0093959.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100880058 100889218 + MGP_BALBcJ_P0093959 Topbp1 protein_coding protein_coding MGP_BALBcJ_T0093960.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100890809 100893899 + MGP_BALBcJ_P0093960 Topbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093961.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100891111 100891860 + Topbp1 protein_coding retained_intron MGP_BALBcJ_T0093962.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100892776 100894260 + Topbp1 protein_coding retained_intron MGP_BALBcJ_T0093963.1 MGP_BALBcJ_G0035171.1 mouse_genomes_project 9 100893397 100897887 + Topbp1 protein_coding retained_intron MGP_BALBcJ_T0009226.1 MGP_BALBcJ_G0007413.1 mouse_genomes_project 9 55175726 55186732 + Gm17322 lincRNA lincRNA MGP_BALBcJ_T0092691.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57769678 57893187 - MGP_BALBcJ_P0092691 Lrrc49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092692.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57769991 57853500 - MGP_BALBcJ_P0092692 Lrrc49 protein_coding protein_coding MGP_BALBcJ_T0092693.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57789036 57893181 - MGP_BALBcJ_P0092693 Lrrc49 protein_coding protein_coding MGP_BALBcJ_T0092694.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57789036 57893221 - MGP_BALBcJ_P0092694 Lrrc49 protein_coding protein_coding MGP_BALBcJ_T0092695.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57789046 57892597 - MGP_BALBcJ_P0092695 Lrrc49 protein_coding protein_coding MGP_BALBcJ_T0092696.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57789046 57892597 - MGP_BALBcJ_P0092696 Lrrc49 protein_coding protein_coding MGP_BALBcJ_T0092697.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57789634 57800366 - Lrrc49 protein_coding retained_intron MGP_BALBcJ_T0092698.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57811492 57892966 - Lrrc49 protein_coding retained_intron MGP_BALBcJ_T0092699.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57812046 57853409 - Lrrc49 protein_coding processed_transcript MGP_BALBcJ_T0092700.1 MGP_BALBcJ_G0034883.1 mouse_genomes_project 9 57884452 57892735 - MGP_BALBcJ_P0092700 Lrrc49 protein_coding protein_coding MGP_BALBcJ_T0005429.1 MGP_BALBcJ_G0004596.1 mouse_genomes_project 9 53390046 53399937 + Peak1os antisense antisense MGP_BALBcJ_T0009253.1 MGP_BALBcJ_G0007434.1 mouse_genomes_project 9 74431649 74436925 + Gm19541 lincRNA lincRNA MGP_BALBcJ_T0092087.1 MGP_BALBcJ_G0034693.1 mouse_genomes_project 9 41854558 41932489 - MGP_BALBcJ_P0092087 Kmt2a protein_coding unknown_likely_coding MGP_BALBcJ_T0092088.1 MGP_BALBcJ_G0034693.1 mouse_genomes_project 9 41854559 41932489 - MGP_BALBcJ_P0092088 Kmt2a protein_coding protein_coding MGP_BALBcJ_T0092089.1 MGP_BALBcJ_G0034693.1 mouse_genomes_project 9 41854559 41932511 - MGP_BALBcJ_P0092089 Kmt2a protein_coding protein_coding MGP_BALBcJ_T0092090.1 MGP_BALBcJ_G0034693.1 mouse_genomes_project 9 41865849 41871285 - MGP_BALBcJ_P0092090 Kmt2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092091.1 MGP_BALBcJ_G0034693.1 mouse_genomes_project 9 41873904 41899237 - MGP_BALBcJ_P0092091 Kmt2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092092.1 MGP_BALBcJ_G0034693.1 mouse_genomes_project 9 41892616 41932511 - MGP_BALBcJ_P0092092 Kmt2a protein_coding protein_coding MGP_BALBcJ_T0101503.1 MGP_BALBcJ_G0039539.1 mouse_genomes_project 9 106413026 106413173 - Gm23034 snoRNA snoRNA MGP_BALBcJ_T0100218.1 MGP_BALBcJ_G0038254.1 mouse_genomes_project 9 93404573 93404751 + Gm24004 snRNA snRNA MGP_BALBcJ_T0093990.1 MGP_BALBcJ_G0035179.1 mouse_genomes_project 9 101649269 101667626 - Ackr4 protein_coding processed_transcript MGP_BALBcJ_T0093993.1 MGP_BALBcJ_G0035179.1 mouse_genomes_project 9 101663187 101692953 - MGP_BALBcJ_P0093993 Ackr4 protein_coding protein_coding MGP_BALBcJ_T0093994.1 MGP_BALBcJ_G0035179.1 mouse_genomes_project 9 101663318 101668085 - MGP_BALBcJ_P0093994 Ackr4 protein_coding protein_coding MGP_BALBcJ_T0095304.1 MGP_BALBcJ_G0035428.1 mouse_genomes_project 9 119912372 119957897 - MGP_BALBcJ_P0095304 Ccdc13 protein_coding protein_coding MGP_BALBcJ_T0095305.1 MGP_BALBcJ_G0035428.1 mouse_genomes_project 9 119912378 119925344 - MGP_BALBcJ_P0095305 Ccdc13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095306.1 MGP_BALBcJ_G0035428.1 mouse_genomes_project 9 119912913 119925490 - Ccdc13 protein_coding retained_intron MGP_BALBcJ_T0095307.1 MGP_BALBcJ_G0035428.1 mouse_genomes_project 9 119913751 119925326 - MGP_BALBcJ_P0095307 Ccdc13 protein_coding protein_coding MGP_BALBcJ_T0095308.1 MGP_BALBcJ_G0035428.1 mouse_genomes_project 9 119914262 119925429 - Ccdc13 protein_coding retained_intron MGP_BALBcJ_T0095309.1 MGP_BALBcJ_G0035428.1 mouse_genomes_project 9 119934707 119948456 - Ccdc13 protein_coding retained_intron MGP_BALBcJ_T0093394.1 MGP_BALBcJ_G0035050.1 mouse_genomes_project 9 79013451 79018987 - MGP_BALBcJ_P0093394 Htr1b protein_coding protein_coding MGP_BALBcJ_T0093395.1 MGP_BALBcJ_G0035050.1 mouse_genomes_project 9 79016501 79017774 - MGP_BALBcJ_P0093395 Htr1b protein_coding protein_coding MGP_BALBcJ_T0091233.1 MGP_BALBcJ_G0034333.1 mouse_genomes_project 9 11925040 11945761 + MGP_BALBcJ_P0091233 Vstm5 protein_coding protein_coding MGP_BALBcJ_T0005448.1 MGP_BALBcJ_G0004608.1 mouse_genomes_project 9 67328925 67330492 - Gm28731 antisense antisense MGP_BALBcJ_T0093970.1 MGP_BALBcJ_G0035174.1 mouse_genomes_project 9 101035672 101247225 - MGP_BALBcJ_P0093970 Tmem108 protein_coding protein_coding MGP_BALBcJ_T0093971.1 MGP_BALBcJ_G0035174.1 mouse_genomes_project 9 101036503 101316226 - MGP_BALBcJ_P0093971 Tmem108 protein_coding protein_coding MGP_BALBcJ_T0093972.1 MGP_BALBcJ_G0035174.1 mouse_genomes_project 9 101037161 101316183 - MGP_BALBcJ_P0093972 Tmem108 protein_coding protein_coding MGP_BALBcJ_T0093973.1 MGP_BALBcJ_G0035174.1 mouse_genomes_project 9 101037164 101046377 - Tmem108 protein_coding retained_intron MGP_BALBcJ_T0093974.1 MGP_BALBcJ_G0035174.1 mouse_genomes_project 9 101306647 101316179 - Tmem108 protein_coding retained_intron MGP_BALBcJ_T0094963.1 MGP_BALBcJ_G0035334.1 mouse_genomes_project 9 108642737 108647888 + MGP_BALBcJ_P0094963 Prss43 protein_coding protein_coding MGP_BALBcJ_T0092094.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 41974880 42017531 - MGP_BALBcJ_P0092094 Ube4a protein_coding protein_coding MGP_BALBcJ_T0092095.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 41977597 42017571 - MGP_BALBcJ_P0092095 Ube4a protein_coding protein_coding MGP_BALBcJ_T0092096.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 41985054 42017490 - MGP_BALBcJ_P0092096 Ube4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092097.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 41985154 42017496 - MGP_BALBcJ_P0092097 Ube4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092098.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 41998025 42017528 - Ube4a protein_coding retained_intron MGP_BALBcJ_T0092099.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 42004918 42017525 - MGP_BALBcJ_P0092099 Ube4a protein_coding protein_coding MGP_BALBcJ_T0092100.1 MGP_BALBcJ_G0034695.1 mouse_genomes_project 9 42008251 42017507 - Ube4a protein_coding retained_intron MGP_BALBcJ_T0101473.1 MGP_BALBcJ_G0039509.1 mouse_genomes_project 9 61417054 61417153 + Gm23136 snoRNA snoRNA MGP_BALBcJ_T0094129.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022203 104029624 - MGP_BALBcJ_P0094129 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094130.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022206 104029624 - MGP_BALBcJ_P0094130 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094131.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022208 104029509 - MGP_BALBcJ_P0094131 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094132.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022262 104029389 - MGP_BALBcJ_P0094132 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094133.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022534 104026938 - MGP_BALBcJ_P0094133 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094134.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022851 104029566 - MGP_BALBcJ_P0094134 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094135.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104022931 104029463 - MGP_BALBcJ_P0094135 Abhd14a protein_coding protein_coding MGP_BALBcJ_T0094136.1 MGP_BALBcJ_G0035203.1 mouse_genomes_project 9 104025525 104026243 - Abhd14a protein_coding retained_intron MGP_BALBcJ_T0092482.1 MGP_BALBcJ_G0034822.1 mouse_genomes_project 9 53332234 53376301 - MGP_BALBcJ_P0092482 Peak1 protein_coding protein_coding MGP_BALBcJ_T0092483.1 MGP_BALBcJ_G0034822.1 mouse_genomes_project 9 53336237 53550658 - MGP_BALBcJ_P0092483 Peak1 protein_coding protein_coding MGP_BALBcJ_T0092484.1 MGP_BALBcJ_G0034822.1 mouse_genomes_project 9 53392713 53550633 - MGP_BALBcJ_P0092484 Peak1 protein_coding protein_coding MGP_BALBcJ_T0092485.1 MGP_BALBcJ_G0034822.1 mouse_genomes_project 9 53549289 53550641 - Peak1 protein_coding retained_intron MGP_BALBcJ_T0092751.1 MGP_BALBcJ_G0034896.1 mouse_genomes_project 9 60021738 60042366 - MGP_BALBcJ_P0092751 Fem1b protein_coding protein_coding MGP_BALBcJ_T0091479.1 MGP_BALBcJ_G0034441.1 mouse_genomes_project 9 18775864 18788848 - MGP_BALBcJ_P0091479 Ccdc151 protein_coding protein_coding MGP_BALBcJ_T0091480.1 MGP_BALBcJ_G0034441.1 mouse_genomes_project 9 18775864 18788848 - MGP_BALBcJ_P0091480 Ccdc151 protein_coding protein_coding MGP_BALBcJ_T0092650.1 MGP_BALBcJ_G0034874.1 mouse_genomes_project 9 56740502 56766019 + MGP_BALBcJ_P0092650 Hexa protein_coding protein_coding MGP_BALBcJ_T0093304.1 MGP_BALBcJ_G0035028.1 mouse_genomes_project 9 75318802 75388070 + MGP_BALBcJ_P0093304 Elovl5 protein_coding protein_coding MGP_BALBcJ_T0093305.1 MGP_BALBcJ_G0035028.1 mouse_genomes_project 9 75318872 75363422 + Elovl5 protein_coding retained_intron MGP_BALBcJ_T0093306.1 MGP_BALBcJ_G0035028.1 mouse_genomes_project 9 75323342 75383417 + MGP_BALBcJ_P0093306 Elovl5 protein_coding protein_coding MGP_BALBcJ_T0093307.1 MGP_BALBcJ_G0035028.1 mouse_genomes_project 9 75342990 75366741 + MGP_BALBcJ_P0093307 Elovl5 protein_coding protein_coding MGP_BALBcJ_T0095216.1 MGP_BALBcJ_G0035403.1 mouse_genomes_project 9 118038658 118068533 + MGP_BALBcJ_P0095216 Ttc21a protein_coding protein_coding MGP_BALBcJ_T0095217.1 MGP_BALBcJ_G0035403.1 mouse_genomes_project 9 118038687 118067789 + Ttc21a protein_coding retained_intron MGP_BALBcJ_T0095218.1 MGP_BALBcJ_G0035403.1 mouse_genomes_project 9 118038688 118063408 + Ttc21a protein_coding retained_intron MGP_BALBcJ_T0095219.1 MGP_BALBcJ_G0035403.1 mouse_genomes_project 9 118062349 118066905 + Ttc21a protein_coding retained_intron MGP_BALBcJ_T0091994.1 MGP_BALBcJ_G0034664.1 mouse_genomes_project 9 41147920 41150817 - MGP_BALBcJ_P0091994 Rnf26 protein_coding protein_coding MGP_BALBcJ_T0094638.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106181582 106184471 + MGP_BALBcJ_P0094638 Dalrd3 protein_coding protein_coding MGP_BALBcJ_T0094639.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106181606 106183216 + MGP_BALBcJ_P0094639 Dalrd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094640.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106181610 106182383 + Dalrd3 protein_coding retained_intron MGP_BALBcJ_T0094641.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106182392 106183678 + Dalrd3 protein_coding retained_intron MGP_BALBcJ_T0094642.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106182703 106183537 + Dalrd3 protein_coding retained_intron MGP_BALBcJ_T0094643.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106182933 106184470 + Dalrd3 protein_coding retained_intron MGP_BALBcJ_T0094644.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106183214 106184228 + MGP_BALBcJ_P0094644 Dalrd3 protein_coding protein_coding MGP_BALBcJ_T0094645.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106183963 106184468 + Dalrd3 protein_coding retained_intron MGP_BALBcJ_T0094647.1 MGP_BALBcJ_G0035279.1 mouse_genomes_project 9 106184088 106184352 + MGP_BALBcJ_P0094647 Dalrd3 protein_coding protein_coding MGP_BALBcJ_T0091503.1 MGP_BALBcJ_G0034453.1 mouse_genomes_project 9 19067716 19098755 - MGP_BALBcJ_P0091503 Zfp810 protein_coding protein_coding MGP_BALBcJ_T0011038.1 MGP_BALBcJ_G0009163.1 mouse_genomes_project 9 41377021 41377162 - Gm44335 miRNA miRNA MGP_BALBcJ_T0091801.1 MGP_BALBcJ_G0034550.1 mouse_genomes_project 9 34933370 34934300 + MGP_BALBcJ_P0091801 Olfr883 protein_coding protein_coding MGP_BALBcJ_T0098677.1 MGP_BALBcJ_G0036731.1 mouse_genomes_project 9 93968335 93968417 - Gm27289 rRNA rRNA MGP_BALBcJ_T0016038.1 MGP_BALBcJ_G0014135.1 mouse_genomes_project 9 71024430 71024590 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091422.1 MGP_BALBcJ_G0034421.1 mouse_genomes_project 9 18191338 18200925 + MGP_BALBcJ_P0091422 Qtrt1 protein_coding protein_coding MGP_BALBcJ_T0016106.1 MGP_BALBcJ_G0014203.1 mouse_genomes_project 9 98586959 98587323 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091766.1 MGP_BALBcJ_G0034532.1 mouse_genomes_project 9 34249035 34270986 + MGP_BALBcJ_P0091766 Hepacam protein_coding protein_coding MGP_BALBcJ_T0016031.1 MGP_BALBcJ_G0014128.1 mouse_genomes_project 9 69540083 69540699 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092936.1 MGP_BALBcJ_G0034949.1 mouse_genomes_project 9 63786992 63793128 - MGP_BALBcJ_P0092936 Fbxl22 protein_coding protein_coding MGP_BALBcJ_T0016083.1 MGP_BALBcJ_G0014180.1 mouse_genomes_project 9 89999283 89999431 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094020.1 MGP_BALBcJ_G0035183.1 mouse_genomes_project 9 102631721 102665798 + MGP_BALBcJ_P0094020 Mrpl3 protein_coding protein_coding MGP_BALBcJ_T0094021.1 MGP_BALBcJ_G0035183.1 mouse_genomes_project 9 102631721 102662378 + MGP_BALBcJ_P0094021 Mrpl3 protein_coding protein_coding MGP_BALBcJ_T0094022.1 MGP_BALBcJ_G0035183.1 mouse_genomes_project 9 102631752 102640406 + MGP_BALBcJ_P0094022 Mrpl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094023.1 MGP_BALBcJ_G0035183.1 mouse_genomes_project 9 102631752 102634085 + MGP_BALBcJ_P0094023 Mrpl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094024.1 MGP_BALBcJ_G0035183.1 mouse_genomes_project 9 102631783 102663372 + MGP_BALBcJ_P0094024 Mrpl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094025.1 MGP_BALBcJ_G0035183.1 mouse_genomes_project 9 102657025 102659970 + Mrpl3 protein_coding retained_intron MGP_BALBcJ_T0002347.1 MGP_BALBcJ_G0002257.1 mouse_genomes_project 9 29830013 29831367 + TEC TEC MGP_BALBcJ_T0009261.1 MGP_BALBcJ_G0007442.1 mouse_genomes_project 9 80644508 80657872 - Gm27216 lincRNA lincRNA MGP_BALBcJ_T0009262.1 MGP_BALBcJ_G0007442.1 mouse_genomes_project 9 80644518 80658390 - Gm27216 lincRNA lincRNA MGP_BALBcJ_T0009263.1 MGP_BALBcJ_G0007442.1 mouse_genomes_project 9 80644535 80658337 - Gm27216 lincRNA lincRNA MGP_BALBcJ_T0100171.1 MGP_BALBcJ_G0038207.1 mouse_genomes_project 9 17018494 17018590 - Gm25425 snRNA snRNA MGP_BALBcJ_T0016102.1 MGP_BALBcJ_G0014199.1 mouse_genomes_project 9 96712687 96713207 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095232.1 MGP_BALBcJ_G0035409.1 mouse_genomes_project 9 118241650 118246254 + MGP_BALBcJ_P0095232 Rpsa protein_coding protein_coding MGP_BALBcJ_T0093721.1 MGP_BALBcJ_G0035118.1 mouse_genomes_project 9 93942280 93950560 - MGP_BALBcJ_P0093721 Rnf7 protein_coding protein_coding MGP_BALBcJ_T0093722.1 MGP_BALBcJ_G0035118.1 mouse_genomes_project 9 93945272 93950473 - Rnf7 protein_coding processed_transcript MGP_BALBcJ_T0016092.1 MGP_BALBcJ_G0014189.1 mouse_genomes_project 9 93138633 93139222 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100212.1 MGP_BALBcJ_G0038248.1 mouse_genomes_project 9 84130332 84130446 - Gm25949 snRNA snRNA MGP_BALBcJ_T0095189.1 MGP_BALBcJ_G0035392.1 mouse_genomes_project 9 117331907 117418369 - MGP_BALBcJ_P0095189 Oxsr1 protein_coding protein_coding MGP_BALBcJ_T0095190.1 MGP_BALBcJ_G0035392.1 mouse_genomes_project 9 117334143 117418264 - MGP_BALBcJ_P0095190 Oxsr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095191.1 MGP_BALBcJ_G0035392.1 mouse_genomes_project 9 117334618 117336877 - Oxsr1 protein_coding retained_intron MGP_BALBcJ_T0095192.1 MGP_BALBcJ_G0035392.1 mouse_genomes_project 9 117336282 117358307 - MGP_BALBcJ_P0095192 Oxsr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099026.1 MGP_BALBcJ_G0037068.1 mouse_genomes_project 9 25026629 25027987 + Gm15606 sense_intronic sense_intronic MGP_BALBcJ_T0099027.1 MGP_BALBcJ_G0037068.1 mouse_genomes_project 9 25026682 25028264 + Gm15606 sense_intronic sense_intronic MGP_BALBcJ_T0094160.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104052238 104058855 - MGP_BALBcJ_P0094160 Parp3 protein_coding protein_coding MGP_BALBcJ_T0094161.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104052544 104058282 - MGP_BALBcJ_P0094161 Parp3 protein_coding protein_coding MGP_BALBcJ_T0094162.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104052906 104058075 - Parp3 protein_coding retained_intron MGP_BALBcJ_T0094163.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104052906 104058575 - MGP_BALBcJ_P0094163 Parp3 protein_coding protein_coding MGP_BALBcJ_T0094164.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104052912 104053940 - Parp3 protein_coding retained_intron MGP_BALBcJ_T0094165.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104056339 104058010 - MGP_BALBcJ_P0094165 Parp3 protein_coding protein_coding MGP_BALBcJ_T0094166.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104056546 104058502 - Parp3 protein_coding retained_intron MGP_BALBcJ_T0094167.1 MGP_BALBcJ_G0035207.1 mouse_genomes_project 9 104056576 104058301 - MGP_BALBcJ_P0094167 Parp3 protein_coding protein_coding MGP_BALBcJ_T0018514.1 MGP_BALBcJ_G0015686.1 mouse_genomes_project 9 77326415 77326847 + Gm3211 processed_transcript processed_transcript MGP_BALBcJ_T0092361.1 MGP_BALBcJ_G0034783.1 mouse_genomes_project 9 50525504 50552983 + MGP_BALBcJ_P0092361 4930550C14Rik protein_coding protein_coding MGP_BALBcJ_T0002396.1 MGP_BALBcJ_G0002305.1 mouse_genomes_project 9 84605800 84606878 - TEC TEC MGP_BALBcJ_T0092858.1 MGP_BALBcJ_G0034931.1 mouse_genomes_project 9 62673142 62682953 - MGP_BALBcJ_P0092858 Slc51b protein_coding protein_coding MGP_BALBcJ_T0016080.1 MGP_BALBcJ_G0014177.1 mouse_genomes_project 9 88344280 88344572 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092362.1 MGP_BALBcJ_G0034784.1 mouse_genomes_project 9 50557305 50658281 - MGP_BALBcJ_P0092362 Atm protein_coding unknown_likely_coding MGP_BALBcJ_T0092363.1 MGP_BALBcJ_G0034784.1 mouse_genomes_project 9 50559318 50658306 - MGP_BALBcJ_P0092363 Atm protein_coding protein_coding MGP_BALBcJ_T0092364.1 MGP_BALBcJ_G0034784.1 mouse_genomes_project 9 50560274 50562732 - Atm protein_coding retained_intron MGP_BALBcJ_T0092365.1 MGP_BALBcJ_G0034784.1 mouse_genomes_project 9 50565546 50573789 - MGP_BALBcJ_P0092365 Atm protein_coding protein_coding MGP_BALBcJ_T0092366.1 MGP_BALBcJ_G0034784.1 mouse_genomes_project 9 50643117 50658239 - Atm protein_coding retained_intron MGP_BALBcJ_T0092367.1 MGP_BALBcJ_G0034784.1 mouse_genomes_project 9 50648465 50658174 - MGP_BALBcJ_P0092367 Atm protein_coding protein_coding MGP_BALBcJ_T0091400.1 MGP_BALBcJ_G0034413.1 mouse_genomes_project 9 18007570 18017173 - MGP_BALBcJ_P0091400 Keap1 protein_coding protein_coding MGP_BALBcJ_T0091401.1 MGP_BALBcJ_G0034413.1 mouse_genomes_project 9 18007571 18016912 - MGP_BALBcJ_P0091401 Keap1 protein_coding protein_coding MGP_BALBcJ_T0091402.1 MGP_BALBcJ_G0034413.1 mouse_genomes_project 9 18007907 18016654 - MGP_BALBcJ_P0091402 Keap1 protein_coding protein_coding MGP_BALBcJ_T0091403.1 MGP_BALBcJ_G0034413.1 mouse_genomes_project 9 18008473 18016920 - MGP_BALBcJ_P0091403 Keap1 protein_coding protein_coding MGP_BALBcJ_T0091404.1 MGP_BALBcJ_G0034413.1 mouse_genomes_project 9 18013963 18015034 - Keap1 protein_coding processed_transcript MGP_BALBcJ_T0002453.1 MGP_BALBcJ_G0002362.1 mouse_genomes_project 9 105793566 105794384 - TEC TEC MGP_BALBcJ_T0092291.1 MGP_BALBcJ_G0034761.1 mouse_genomes_project 9 47863109 47864403 - MGP_BALBcJ_P0092291 Hspb2 protein_coding protein_coding MGP_BALBcJ_T0091507.1 MGP_BALBcJ_G0034457.1 mouse_genomes_project 9 19249807 19257580 + MGP_BALBcJ_P0091507 Gm17545 protein_coding protein_coding MGP_BALBcJ_T0095207.1 MGP_BALBcJ_G0035398.1 mouse_genomes_project 9 117577855 117682711 - MGP_BALBcJ_P0095207 Scn5a protein_coding unknown_likely_coding MGP_BALBcJ_T0095208.1 MGP_BALBcJ_G0035398.1 mouse_genomes_project 9 117586071 117666509 - MGP_BALBcJ_P0095208 Scn5a protein_coding protein_coding MGP_BALBcJ_T0095209.1 MGP_BALBcJ_G0035398.1 mouse_genomes_project 9 117586073 117682839 - MGP_BALBcJ_P0095209 Scn5a protein_coding protein_coding MGP_BALBcJ_T0095210.1 MGP_BALBcJ_G0035398.1 mouse_genomes_project 9 117586987 117682839 - MGP_BALBcJ_P0095210 Scn5a protein_coding protein_coding MGP_BALBcJ_T0095211.1 MGP_BALBcJ_G0035398.1 mouse_genomes_project 9 117666367 117667336 - MGP_BALBcJ_P0095211 Scn5a protein_coding protein_coding MGP_BALBcJ_T0092762.1 MGP_BALBcJ_G0034901.1 mouse_genomes_project 9 60397947 60612132 - MGP_BALBcJ_P0092762 Map2k5 protein_coding protein_coding MGP_BALBcJ_T0093605.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87609391 87646973 + MGP_BALBcJ_P0093605 Adamts7 protein_coding protein_coding MGP_BALBcJ_T0093606.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87609400 87654943 + MGP_BALBcJ_P0093606 Adamts7 protein_coding protein_coding MGP_BALBcJ_T0093607.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87609446 87646973 + MGP_BALBcJ_P0093607 Adamts7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093608.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87609524 87646863 + MGP_BALBcJ_P0093608 Adamts7 protein_coding protein_coding MGP_BALBcJ_T0093609.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87609548 87646975 + MGP_BALBcJ_P0093609 Adamts7 protein_coding protein_coding MGP_BALBcJ_T0093610.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87635528 87638439 + Adamts7 protein_coding retained_intron MGP_BALBcJ_T0093611.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87637857 87640361 + Adamts7 protein_coding processed_transcript MGP_BALBcJ_T0093612.1 MGP_BALBcJ_G0035094.1 mouse_genomes_project 9 87642001 87646970 + Adamts7 protein_coding retained_intron MGP_BALBcJ_T0005392.1 MGP_BALBcJ_G0004572.1 mouse_genomes_project 9 17377741 17389383 + Fbxl12os antisense antisense MGP_BALBcJ_T0005393.1 MGP_BALBcJ_G0004572.1 mouse_genomes_project 9 17377928 17385251 + Fbxl12os antisense antisense MGP_BALBcJ_T0005394.1 MGP_BALBcJ_G0004572.1 mouse_genomes_project 9 17378076 17385256 + Fbxl12os antisense antisense MGP_BALBcJ_T0005395.1 MGP_BALBcJ_G0004572.1 mouse_genomes_project 9 17384987 17386153 + Fbxl12os antisense antisense MGP_BALBcJ_T0005413.1 MGP_BALBcJ_G0004587.1 mouse_genomes_project 9 42377469 42381254 - 1700003G13Rik antisense antisense MGP_BALBcJ_T0005414.1 MGP_BALBcJ_G0004587.1 mouse_genomes_project 9 42377470 42381275 - 1700003G13Rik antisense antisense MGP_BALBcJ_T0093765.1 MGP_BALBcJ_G0035125.1 mouse_genomes_project 9 94924959 95519814 - MGP_BALBcJ_P0093765 Clstn2 protein_coding protein_coding MGP_BALBcJ_T0093766.1 MGP_BALBcJ_G0035125.1 mouse_genomes_project 9 94933823 95519616 - MGP_BALBcJ_P0093766 Clstn2 protein_coding protein_coding MGP_BALBcJ_T0018544.1 MGP_BALBcJ_G0015698.1 mouse_genomes_project 9 105736921 105740782 + 4930447F24Rik processed_transcript antisense MGP_BALBcJ_T0018545.1 MGP_BALBcJ_G0015698.1 mouse_genomes_project 9 105739732 105741445 + 4930447F24Rik processed_transcript antisense MGP_BALBcJ_T0018546.1 MGP_BALBcJ_G0015698.1 mouse_genomes_project 9 105740205 105740593 + 4930447F24Rik processed_transcript retained_intron MGP_BALBcJ_T0095279.1 MGP_BALBcJ_G0035422.1 mouse_genomes_project 9 119793868 119819186 - MGP_BALBcJ_P0095279 Sec22c protein_coding protein_coding MGP_BALBcJ_T0095280.1 MGP_BALBcJ_G0035422.1 mouse_genomes_project 9 119796967 119819622 - MGP_BALBcJ_P0095280 Sec22c protein_coding protein_coding MGP_BALBcJ_T0095281.1 MGP_BALBcJ_G0035422.1 mouse_genomes_project 9 119798494 119819136 - MGP_BALBcJ_P0095281 Sec22c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095282.1 MGP_BALBcJ_G0035422.1 mouse_genomes_project 9 119802131 119804389 - Sec22c protein_coding retained_intron MGP_BALBcJ_T0095283.1 MGP_BALBcJ_G0035422.1 mouse_genomes_project 9 119809531 119819647 - MGP_BALBcJ_P0095283 Sec22c protein_coding protein_coding MGP_BALBcJ_T0002400.1 MGP_BALBcJ_G0002309.1 mouse_genomes_project 9 86691010 86691889 + TEC TEC MGP_BALBcJ_T0091105.1 MGP_BALBcJ_G0034290.1 mouse_genomes_project 9 3975290 3986110 + MGP_BALBcJ_P0091105 Mmp13 protein_coding protein_coding MGP_BALBcJ_T0091693.1 MGP_BALBcJ_G0034508.1 mouse_genomes_project 9 32434606 32551731 + MGP_BALBcJ_P0091693 Pate2 protein_coding protein_coding MGP_BALBcJ_T0091694.1 MGP_BALBcJ_G0034508.1 mouse_genomes_project 9 32438198 32505063 + Pate2 protein_coding processed_transcript MGP_BALBcJ_T0091697.1 MGP_BALBcJ_G0034508.1 mouse_genomes_project 9 32530960 32534211 + MGP_BALBcJ_P0091697 Pate2 protein_coding protein_coding MGP_BALBcJ_T0091698.1 MGP_BALBcJ_G0034508.1 mouse_genomes_project 9 32530972 32532737 + Pate2 protein_coding retained_intron MGP_BALBcJ_T0094422.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105524662 105545990 + Traip protein_coding retained_intron MGP_BALBcJ_T0094423.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105525482 105546735 + MGP_BALBcJ_P0094423 Traip protein_coding protein_coding MGP_BALBcJ_T0094424.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105525493 105532958 + Traip protein_coding processed_transcript MGP_BALBcJ_T0094425.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105525514 105535516 + MGP_BALBcJ_P0094425 Traip protein_coding protein_coding MGP_BALBcJ_T0094426.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105534861 105536132 + Traip protein_coding processed_transcript MGP_BALBcJ_T0094427.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105536642 105543108 + Traip protein_coding retained_intron MGP_BALBcJ_T0094428.1 MGP_BALBcJ_G0035248.1 mouse_genomes_project 9 105536703 105543205 + Traip protein_coding retained_intron MGP_BALBcJ_T0092991.1 MGP_BALBcJ_G0034961.1 mouse_genomes_project 9 65156217 65158016 - MGP_BALBcJ_P0092991 C2cd4a protein_coding protein_coding MGP_BALBcJ_T0092412.1 MGP_BALBcJ_G0034802.1 mouse_genomes_project 9 51827394 51847105 - MGP_BALBcJ_P0092412 Wdr61 protein_coding protein_coding MGP_BALBcJ_T0092413.1 MGP_BALBcJ_G0034802.1 mouse_genomes_project 9 51829814 51847115 - MGP_BALBcJ_P0092413 Wdr61 protein_coding protein_coding MGP_BALBcJ_T0092414.1 MGP_BALBcJ_G0034802.1 mouse_genomes_project 9 51831879 51833474 - Wdr61 protein_coding retained_intron MGP_BALBcJ_T0092415.1 MGP_BALBcJ_G0034802.1 mouse_genomes_project 9 51835184 51837017 - Wdr61 protein_coding retained_intron MGP_BALBcJ_T0091711.1 MGP_BALBcJ_G0034521.1 mouse_genomes_project 9 33471681 33473039 - MGP_BALBcJ_P0091711 Gm17689 protein_coding protein_coding MGP_BALBcJ_T0098410.1 MGP_BALBcJ_G0036464.1 mouse_genomes_project 9 15874426 15875375 + pseudogene pseudogene MGP_BALBcJ_T0095272.1 MGP_BALBcJ_G0035420.1 mouse_genomes_project 9 119687304 119753869 - MGP_BALBcJ_P0095272 Lyzl4 protein_coding protein_coding MGP_BALBcJ_T0095273.1 MGP_BALBcJ_G0035420.1 mouse_genomes_project 9 119687310 119754400 - MGP_BALBcJ_P0095273 Lyzl4 protein_coding protein_coding MGP_BALBcJ_T0095274.1 MGP_BALBcJ_G0035420.1 mouse_genomes_project 9 119693548 119753829 - MGP_BALBcJ_P0095274 Lyzl4 protein_coding protein_coding MGP_BALBcJ_T0094796.1 MGP_BALBcJ_G0035308.1 mouse_genomes_project 9 107033111 107425307 - MGP_BALBcJ_P0094796 protein_coding protein_coding MGP_BALBcJ_T0094797.1 MGP_BALBcJ_G0035308.1 mouse_genomes_project 9 107056633 107425291 - MGP_BALBcJ_P0094797 protein_coding protein_coding MGP_BALBcJ_T0091385.1 MGP_BALBcJ_G0034404.1 mouse_genomes_project 9 17788101 17802021 + MGP_BALBcJ_P0091385 Icam1 protein_coding protein_coding MGP_BALBcJ_T0091080.1 MGP_BALBcJ_G0034283.1 mouse_genomes_project 9 1962104 1970873 + MGP_BALBcJ_P0091080 Casp1 protein_coding protein_coding MGP_BALBcJ_T0091277.1 MGP_BALBcJ_G0034347.1 mouse_genomes_project 9 15181762 15204239 - MGP_BALBcJ_P0091277 Zfp558 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091278.1 MGP_BALBcJ_G0034347.1 mouse_genomes_project 9 15182379 15199535 - MGP_BALBcJ_P0091278 Zfp558 protein_coding protein_coding MGP_BALBcJ_T0091279.1 MGP_BALBcJ_G0034347.1 mouse_genomes_project 9 15185844 15204244 - Zfp558 protein_coding processed_transcript MGP_BALBcJ_T0091280.1 MGP_BALBcJ_G0034347.1 mouse_genomes_project 9 15198865 15199398 - Zfp558 protein_coding processed_transcript MGP_BALBcJ_T0002382.1 MGP_BALBcJ_G0002292.1 mouse_genomes_project 9 73410043 73413925 + TEC TEC MGP_BALBcJ_T0009266.1 MGP_BALBcJ_G0007445.1 mouse_genomes_project 9 85637432 85640574 + Gm28231 lincRNA lincRNA MGP_BALBcJ_T0091877.1 MGP_BALBcJ_G0034613.1 mouse_genomes_project 9 36638003 36638939 + MGP_BALBcJ_P0091877 Olfr963 protein_coding protein_coding MGP_BALBcJ_T0093565.1 MGP_BALBcJ_G0035083.1 mouse_genomes_project 9 86238164 86262858 + MGP_BALBcJ_P0093565 protein_coding protein_coding MGP_BALBcJ_T0091899.1 MGP_BALBcJ_G0034635.1 mouse_genomes_project 9 37154792 37155808 + MGP_BALBcJ_P0091899 Olfr986 protein_coding protein_coding MGP_BALBcJ_T0002402.1 MGP_BALBcJ_G0002311.1 mouse_genomes_project 9 87602403 87606192 - TEC TEC MGP_BALBcJ_T0016059.1 MGP_BALBcJ_G0014156.1 mouse_genomes_project 9 79907412 79907740 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005401.1 MGP_BALBcJ_G0004576.1 mouse_genomes_project 9 21151247 21234106 + Gm10701 antisense antisense MGP_BALBcJ_T0002370.1 MGP_BALBcJ_G0002280.1 mouse_genomes_project 9 70036923 70038425 + TEC TEC MGP_BALBcJ_T0091318.1 MGP_BALBcJ_G0034385.1 mouse_genomes_project 9 17084846 17107943 - MGP_BALBcJ_P0091318 Olfr18 protein_coding protein_coding MGP_BALBcJ_T0092215.1 MGP_BALBcJ_G0034730.1 mouse_genomes_project 9 45457152 45493366 + MGP_BALBcJ_P0092215 Nxpe4 protein_coding protein_coding MGP_BALBcJ_T0093243.1 MGP_BALBcJ_G0035009.1 mouse_genomes_project 9 72648847 72683098 + MGP_BALBcJ_P0093243 Gnb5 protein_coding protein_coding MGP_BALBcJ_T0092024.1 MGP_BALBcJ_G0034673.1 mouse_genomes_project 9 41368154 41375657 + MGP_BALBcJ_P0092024 Dpagt1 protein_coding protein_coding MGP_BALBcJ_T0095107.1 MGP_BALBcJ_G0035370.1 mouse_genomes_project 9 112729748 112754884 - MGP_BALBcJ_P0095107 Cmtm7 protein_coding protein_coding MGP_BALBcJ_T0095108.1 MGP_BALBcJ_G0035370.1 mouse_genomes_project 9 112729748 112754884 - MGP_BALBcJ_P0095108 Cmtm7 protein_coding protein_coding MGP_BALBcJ_T0093434.1 MGP_BALBcJ_G0035056.1 mouse_genomes_project 9 80954564 81046220 + MGP_BALBcJ_P0093434 Sh3bgrl2 protein_coding protein_coding MGP_BALBcJ_T0093435.1 MGP_BALBcJ_G0035056.1 mouse_genomes_project 9 80954566 80955249 + Sh3bgrl2 protein_coding retained_intron MGP_BALBcJ_T0093436.1 MGP_BALBcJ_G0035056.1 mouse_genomes_project 9 80954587 81045719 + MGP_BALBcJ_P0093436 Sh3bgrl2 protein_coding protein_coding MGP_BALBcJ_T0093437.1 MGP_BALBcJ_G0035056.1 mouse_genomes_project 9 80954614 81004229 + MGP_BALBcJ_P0093437 Sh3bgrl2 protein_coding protein_coding MGP_BALBcJ_T0009294.1 MGP_BALBcJ_G0007466.1 mouse_genomes_project 9 97972752 97974331 + Gm28166 lincRNA lincRNA MGP_BALBcJ_T0094090.1 MGP_BALBcJ_G0035194.1 mouse_genomes_project 9 103746357 103766931 + MGP_BALBcJ_P0094090 Wdr82 protein_coding protein_coding MGP_BALBcJ_T0094091.1 MGP_BALBcJ_G0035194.1 mouse_genomes_project 9 103746358 103749494 + Wdr82 protein_coding retained_intron MGP_BALBcJ_T0094092.1 MGP_BALBcJ_G0035194.1 mouse_genomes_project 9 103752157 103762318 + MGP_BALBcJ_P0094092 Wdr82 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092721.1 MGP_BALBcJ_G0034889.1 mouse_genomes_project 9 59131684 59161647 - MGP_BALBcJ_P0092721 Kif23 protein_coding protein_coding MGP_BALBcJ_T0092722.1 MGP_BALBcJ_G0034889.1 mouse_genomes_project 9 59132068 59161470 - MGP_BALBcJ_P0092722 Kif23 protein_coding unknown_likely_coding MGP_BALBcJ_T0101779.1 MGP_BALBcJ_G0039726.1 mouse_genomes_project 9 104857370 104858253 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101780.1 MGP_BALBcJ_G0039726.1 mouse_genomes_project 9 104857939 104862062 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0091617.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 28979526 29133187 + MGP_BALBcJ_P0091617 Arhgap32 protein_coding protein_coding MGP_BALBcJ_T0091618.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 28992960 29045712 + MGP_BALBcJ_P0091618 Arhgap32 protein_coding protein_coding MGP_BALBcJ_T0091619.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 29045656 29072367 + Arhgap32 protein_coding retained_intron MGP_BALBcJ_T0091620.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 29071451 29125959 + MGP_BALBcJ_P0091620 Arhgap32 protein_coding protein_coding MGP_BALBcJ_T0091621.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 29088405 29128986 + MGP_BALBcJ_P0091621 Arhgap32 protein_coding protein_coding MGP_BALBcJ_T0091622.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 29088748 29110375 + MGP_BALBcJ_P0091622 Arhgap32 protein_coding protein_coding MGP_BALBcJ_T0091623.1 MGP_BALBcJ_G0034491.1 mouse_genomes_project 9 29109555 29113856 + Arhgap32 protein_coding retained_intron MGP_BALBcJ_T0091088.1 MGP_BALBcJ_G0034285.1 mouse_genomes_project 9 2008272 2032749 + MGP_BALBcJ_P0091088 Casp12 protein_coding unknown_likely_coding MGP_BALBcJ_T0091089.1 MGP_BALBcJ_G0034285.1 mouse_genomes_project 9 2009473 2033533 + MGP_BALBcJ_P0091089 Casp12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091090.1 MGP_BALBcJ_G0034285.1 mouse_genomes_project 9 2009476 2018187 + Casp12 protein_coding retained_intron MGP_BALBcJ_T0091091.1 MGP_BALBcJ_G0034285.1 mouse_genomes_project 9 2009493 2019190 + Casp12 protein_coding retained_intron MGP_BALBcJ_T0091092.1 MGP_BALBcJ_G0034285.1 mouse_genomes_project 9 2009501 2023227 + MGP_BALBcJ_P0091092 Casp12 protein_coding protein_coding MGP_BALBcJ_T0009229.1 MGP_BALBcJ_G0007416.1 mouse_genomes_project 9 57892781 57895453 + B930082K07Rik lincRNA lincRNA MGP_BALBcJ_T0093894.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100124922 100126947 - Cep63 protein_coding TEC MGP_BALBcJ_T0093895.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100126918 100167542 - MGP_BALBcJ_P0093895 Cep63 protein_coding protein_coding MGP_BALBcJ_T0093896.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100126922 100167367 - MGP_BALBcJ_P0093896 Cep63 protein_coding unknown_likely_coding MGP_BALBcJ_T0093897.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100126931 100167952 - MGP_BALBcJ_P0093897 Cep63 protein_coding protein_coding MGP_BALBcJ_T0093898.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100127027 100127510 - Cep63 protein_coding retained_intron MGP_BALBcJ_T0093899.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100130539 100163220 - Cep63 protein_coding retained_intron MGP_BALBcJ_T0093900.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100138367 100142898 - Cep63 protein_coding retained_intron MGP_BALBcJ_T0093901.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100156568 100167441 - MGP_BALBcJ_P0093901 Cep63 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093902.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100160075 100167927 - MGP_BALBcJ_P0093902 Cep63 protein_coding protein_coding MGP_BALBcJ_T0093903.1 MGP_BALBcJ_G0035160.1 mouse_genomes_project 9 100160125 100167927 - MGP_BALBcJ_P0093903 Cep63 protein_coding protein_coding MGP_BALBcJ_T0093111.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608293 69701599 + MGP_BALBcJ_P0093111 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0093112.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608312 69702486 + MGP_BALBcJ_P0093112 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0093113.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608312 69675126 + MGP_BALBcJ_P0093113 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0093114.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608339 69701119 + MGP_BALBcJ_P0093114 Zfp280d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093115.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608340 69702206 + MGP_BALBcJ_P0093115 Zfp280d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093116.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608348 69621802 + Zfp280d protein_coding processed_transcript MGP_BALBcJ_T0093117.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608412 69620494 + Zfp280d protein_coding processed_transcript MGP_BALBcJ_T0093118.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608414 69632862 + Zfp280d protein_coding retained_intron MGP_BALBcJ_T0093119.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69608437 69702470 + MGP_BALBcJ_P0093119 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0093120.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69628991 69702225 + MGP_BALBcJ_P0093120 Zfp280d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093121.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69632413 69657049 + MGP_BALBcJ_P0093121 Zfp280d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093122.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69640722 69642820 + Zfp280d protein_coding retained_intron MGP_BALBcJ_T0093123.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69645667 69647622 + Zfp280d protein_coding processed_transcript MGP_BALBcJ_T0093124.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69645707 69658108 + MGP_BALBcJ_P0093124 Zfp280d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093125.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69646229 69653751 + Zfp280d protein_coding retained_intron MGP_BALBcJ_T0093126.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69662245 69664305 + Zfp280d protein_coding retained_intron MGP_BALBcJ_T0093127.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69665049 69668553 + Zfp280d protein_coding retained_intron MGP_BALBcJ_T0093128.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69665095 69700655 + MGP_BALBcJ_P0093128 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0093129.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69672717 69701376 + MGP_BALBcJ_P0093129 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0093130.1 MGP_BALBcJ_G0034986.1 mouse_genomes_project 9 69698900 69702336 + MGP_BALBcJ_P0093130 Zfp280d protein_coding protein_coding MGP_BALBcJ_T0095400.1 MGP_BALBcJ_G0035461.1 mouse_genomes_project 9 121942525 121947803 + MGP_BALBcJ_P0095400 Cxcr6 protein_coding protein_coding MGP_BALBcJ_T0018535.1 MGP_BALBcJ_G0015694.1 mouse_genomes_project 9 96433235 96438953 - Foxl2os processed_transcript lincRNA MGP_BALBcJ_T0018536.1 MGP_BALBcJ_G0015694.1 mouse_genomes_project 9 96437443 96437938 - Foxl2os processed_transcript retained_intron MGP_BALBcJ_T0018537.1 MGP_BALBcJ_G0015694.1 mouse_genomes_project 9 96437525 96438452 - Foxl2os processed_transcript retained_intron MGP_BALBcJ_T0092133.1 MGP_BALBcJ_G0034711.1 mouse_genomes_project 9 42491143 42818538 + MGP_BALBcJ_P0092133 Dscaml1 protein_coding protein_coding MGP_BALBcJ_T0094635.1 MGP_BALBcJ_G0035278.1 mouse_genomes_project 9 106177573 106178607 - Ndufaf3 protein_coding retained_intron MGP_BALBcJ_T0094636.1 MGP_BALBcJ_G0035278.1 mouse_genomes_project 9 106177655 106178624 - MGP_BALBcJ_P0094636 Ndufaf3 protein_coding protein_coding MGP_BALBcJ_T0094637.1 MGP_BALBcJ_G0035278.1 mouse_genomes_project 9 106177873 106178627 - Ndufaf3 protein_coding retained_intron MGP_BALBcJ_T0091535.1 MGP_BALBcJ_G0034465.1 mouse_genomes_project 9 21942633 21986303 - MGP_BALBcJ_P0091535 Herpud2 protein_coding protein_coding MGP_BALBcJ_T0095158.1 MGP_BALBcJ_G0035384.1 mouse_genomes_project 9 117005220 117126188 + MGP_BALBcJ_P0095158 Ctdspl protein_coding protein_coding MGP_BALBcJ_T0095159.1 MGP_BALBcJ_G0035384.1 mouse_genomes_project 9 117006005 117122846 + MGP_BALBcJ_P0095159 Ctdspl protein_coding protein_coding MGP_BALBcJ_T0095160.1 MGP_BALBcJ_G0035384.1 mouse_genomes_project 9 117009009 117115405 + Ctdspl protein_coding processed_transcript MGP_BALBcJ_T0095161.1 MGP_BALBcJ_G0035384.1 mouse_genomes_project 9 117114777 117123106 + Ctdspl protein_coding retained_intron MGP_BALBcJ_T0093334.1 MGP_BALBcJ_G0035035.1 mouse_genomes_project 9 75800747 75803746 - MGP_BALBcJ_P0093334 Dppa5a protein_coding protein_coding MGP_BALBcJ_T0091291.1 MGP_BALBcJ_G0034358.1 mouse_genomes_project 9 15857780 15858735 + MGP_BALBcJ_P0091291 Olfr836 protein_coding protein_coding MGP_BALBcJ_T0091301.1 MGP_BALBcJ_G0034368.1 mouse_genomes_project 9 16305044 16305992 - MGP_BALBcJ_P0091301 Olfr854 protein_coding protein_coding MGP_BALBcJ_T0005487.1 MGP_BALBcJ_G0004633.1 mouse_genomes_project 9 94830447 94851282 + Gm15891 antisense antisense MGP_BALBcJ_T0091476.1 MGP_BALBcJ_G0034438.1 mouse_genomes_project 9 18739895 18743850 + MGP_BALBcJ_P0091476 Swsap1 protein_coding protein_coding MGP_BALBcJ_T0101506.1 MGP_BALBcJ_G0039542.1 mouse_genomes_project 9 110375502 110375635 + Gm24957 snoRNA snoRNA MGP_BALBcJ_T0092305.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47887028 47973020 + MGP_BALBcJ_P0092305 Alg9 protein_coding protein_coding MGP_BALBcJ_T0092306.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47887314 47973034 + MGP_BALBcJ_P0092306 Alg9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092307.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47887376 47901571 + MGP_BALBcJ_P0092307 Alg9 protein_coding protein_coding MGP_BALBcJ_T0092308.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47887558 47895356 + Alg9 protein_coding processed_transcript MGP_BALBcJ_T0092309.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47888120 47891094 + Alg9 protein_coding processed_transcript MGP_BALBcJ_T0092310.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47914100 47972255 + MGP_BALBcJ_P0092310 Alg9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092311.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47928851 47972854 + MGP_BALBcJ_P0092311 Alg9 protein_coding protein_coding MGP_BALBcJ_T0092312.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47946737 47972463 + Alg9 protein_coding processed_transcript MGP_BALBcJ_T0092313.1 MGP_BALBcJ_G0034765.1 mouse_genomes_project 9 47964782 47972583 + Alg9 protein_coding processed_transcript MGP_BALBcJ_T0092373.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50740113 50792420 - MGP_BALBcJ_P0092373 Cul5 protein_coding protein_coding MGP_BALBcJ_T0092374.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50740113 50794928 - MGP_BALBcJ_P0092374 Cul5 protein_coding protein_coding MGP_BALBcJ_T0092375.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50742131 50747565 - Cul5 protein_coding retained_intron MGP_BALBcJ_T0092376.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50742555 50792424 - MGP_BALBcJ_P0092376 Cul5 protein_coding protein_coding MGP_BALBcJ_T0092377.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50754436 50772186 - Cul5 protein_coding retained_intron MGP_BALBcJ_T0092378.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50759126 50792400 - Cul5 protein_coding retained_intron MGP_BALBcJ_T0092379.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50767867 50772282 - Cul5 protein_coding retained_intron MGP_BALBcJ_T0092380.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50772040 50783648 - Cul5 protein_coding processed_transcript MGP_BALBcJ_T0092381.1 MGP_BALBcJ_G0034787.1 mouse_genomes_project 9 50780319 50791985 - MGP_BALBcJ_P0092381 Cul5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092826.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61965910 61987576 - MGP_BALBcJ_P0092826 Rab11a protein_coding protein_coding MGP_BALBcJ_T0092827.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61966012 61975128 - Rab11a protein_coding retained_intron MGP_BALBcJ_T0092828.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61966113 61976118 - MGP_BALBcJ_P0092828 Rab11a protein_coding protein_coding MGP_BALBcJ_T0092829.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61966177 61975861 - Rab11a protein_coding processed_transcript MGP_BALBcJ_T0092830.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61966256 61987457 - MGP_BALBcJ_P0092830 Rab11a protein_coding protein_coding MGP_BALBcJ_T0092831.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61966350 61987457 - MGP_BALBcJ_P0092831 Rab11a protein_coding protein_coding MGP_BALBcJ_T0092832.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61966360 61987586 - MGP_BALBcJ_P0092832 Rab11a protein_coding protein_coding MGP_BALBcJ_T0092833.1 MGP_BALBcJ_G0034916.1 mouse_genomes_project 9 61976098 61986345 - Rab11a protein_coding processed_transcript MGP_BALBcJ_T0005461.1 MGP_BALBcJ_G0004619.1 mouse_genomes_project 9 79016709 79029776 + D430036J16Rik antisense antisense MGP_BALBcJ_T0005462.1 MGP_BALBcJ_G0004619.1 mouse_genomes_project 9 79017088 79030303 + D430036J16Rik antisense antisense MGP_BALBcJ_T0005463.1 MGP_BALBcJ_G0004619.1 mouse_genomes_project 9 79017191 79029342 + D430036J16Rik antisense antisense MGP_BALBcJ_T0005464.1 MGP_BALBcJ_G0004619.1 mouse_genomes_project 9 79017516 79030232 + D430036J16Rik antisense antisense MGP_BALBcJ_T0005465.1 MGP_BALBcJ_G0004619.1 mouse_genomes_project 9 79017576 79029499 + D430036J16Rik antisense antisense MGP_BALBcJ_T0093425.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80794697 80833242 - MGP_BALBcJ_P0093425 Lca5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093426.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80795784 80847728 - MGP_BALBcJ_P0093426 Lca5 protein_coding protein_coding MGP_BALBcJ_T0093427.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80797839 80847628 - MGP_BALBcJ_P0093427 Lca5 protein_coding protein_coding MGP_BALBcJ_T0093428.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80805256 80806491 - Lca5 protein_coding retained_intron MGP_BALBcJ_T0093429.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80828527 80847694 - Lca5 protein_coding retained_intron MGP_BALBcJ_T0093430.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80829503 80841002 - MGP_BALBcJ_P0093430 Lca5 protein_coding protein_coding MGP_BALBcJ_T0093431.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80829708 80833250 - Lca5 protein_coding retained_intron MGP_BALBcJ_T0093432.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80833029 80847717 - MGP_BALBcJ_P0093432 Lca5 protein_coding protein_coding MGP_BALBcJ_T0093433.1 MGP_BALBcJ_G0035055.1 mouse_genomes_project 9 80833120 80847663 - Lca5 protein_coding processed_transcript MGP_BALBcJ_T0094098.1 MGP_BALBcJ_G0035196.1 mouse_genomes_project 9 103780260 103793215 + MGP_BALBcJ_P0094098 Twf2 protein_coding protein_coding MGP_BALBcJ_T0094099.1 MGP_BALBcJ_G0035196.1 mouse_genomes_project 9 103780289 103789836 + MGP_BALBcJ_P0094099 Twf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094100.1 MGP_BALBcJ_G0035196.1 mouse_genomes_project 9 103780297 103790648 + MGP_BALBcJ_P0094100 Twf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094101.1 MGP_BALBcJ_G0035196.1 mouse_genomes_project 9 103784284 103793213 + MGP_BALBcJ_P0094101 Twf2 protein_coding protein_coding MGP_BALBcJ_T0094102.1 MGP_BALBcJ_G0035196.1 mouse_genomes_project 9 103792053 103792847 + Twf2 protein_coding retained_intron MGP_BALBcJ_T0091824.1 MGP_BALBcJ_G0034572.1 mouse_genomes_project 9 35418482 35419415 + MGP_BALBcJ_P0091824 Olfr907 protein_coding protein_coding MGP_BALBcJ_T0011073.1 MGP_BALBcJ_G0009198.1 mouse_genomes_project 9 105683755 105683841 + Mir7088 miRNA miRNA MGP_BALBcJ_T0091312.1 MGP_BALBcJ_G0034379.1 mouse_genomes_project 9 16857486 16860540 + MGP_BALBcJ_P0091312 Olfr868 protein_coding protein_coding MGP_BALBcJ_T0093273.1 MGP_BALBcJ_G0035022.1 mouse_genomes_project 9 73869368 73948069 - MGP_BALBcJ_P0093273 Fam83b protein_coding protein_coding MGP_BALBcJ_T0093274.1 MGP_BALBcJ_G0035022.1 mouse_genomes_project 9 73870019 73926652 - MGP_BALBcJ_P0093274 Fam83b protein_coding protein_coding MGP_BALBcJ_T0005477.1 MGP_BALBcJ_G0004627.1 mouse_genomes_project 9 93411930 93429130 - Gm16794 antisense antisense MGP_BALBcJ_T0005478.1 MGP_BALBcJ_G0004627.1 mouse_genomes_project 9 93412816 93424378 - Gm16794 antisense antisense MGP_BALBcJ_T0005479.1 MGP_BALBcJ_G0004627.1 mouse_genomes_project 9 93414867 93424387 - Gm16794 antisense antisense MGP_BALBcJ_T0005480.1 MGP_BALBcJ_G0004627.1 mouse_genomes_project 9 93415554 93425136 - Gm16794 antisense antisense MGP_BALBcJ_T0016039.1 MGP_BALBcJ_G0014136.1 mouse_genomes_project 9 71706528 71707006 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093844.1 MGP_BALBcJ_G0035150.1 mouse_genomes_project 9 97980058 98009197 - MGP_BALBcJ_P0093844 Il20rb protein_coding protein_coding MGP_BALBcJ_T0093845.1 MGP_BALBcJ_G0035150.1 mouse_genomes_project 9 97980060 97989286 - Il20rb protein_coding retained_intron MGP_BALBcJ_T0093846.1 MGP_BALBcJ_G0035150.1 mouse_genomes_project 9 97980143 97984146 - Il20rb protein_coding processed_transcript MGP_BALBcJ_T0093847.1 MGP_BALBcJ_G0035150.1 mouse_genomes_project 9 97980900 97984118 - Il20rb protein_coding retained_intron MGP_BALBcJ_T0093848.1 MGP_BALBcJ_G0035150.1 mouse_genomes_project 9 97981446 97992984 - Il20rb protein_coding processed_transcript MGP_BALBcJ_T0093849.1 MGP_BALBcJ_G0035150.1 mouse_genomes_project 9 97988118 98008794 - Il20rb protein_coding retained_intron MGP_BALBcJ_T0016105.1 MGP_BALBcJ_G0014202.1 mouse_genomes_project 9 98146228 98147220 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093228.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72405655 72453044 + Myo5a protein_coding retained_intron MGP_BALBcJ_T0093229.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72405834 72559973 + MGP_BALBcJ_P0093229 Myo5a protein_coding protein_coding MGP_BALBcJ_T0093230.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72405852 72466785 + Myo5a protein_coding retained_intron MGP_BALBcJ_T0093231.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72406032 72554829 + MGP_BALBcJ_P0093231 Myo5a protein_coding protein_coding MGP_BALBcJ_T0093232.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72406211 72512465 + MGP_BALBcJ_P0093232 Myo5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093233.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72406246 72555232 + MGP_BALBcJ_P0093233 Myo5a protein_coding protein_coding MGP_BALBcJ_T0093234.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72476475 72483098 + Myo5a protein_coding retained_intron MGP_BALBcJ_T0093235.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72520092 72554763 + Myo5a protein_coding processed_transcript MGP_BALBcJ_T0093236.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72520155 72530383 + Myo5a protein_coding retained_intron MGP_BALBcJ_T0093237.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72521804 72532483 + MGP_BALBcJ_P0093237 Myo5a protein_coding protein_coding MGP_BALBcJ_T0093238.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72521903 72554272 + MGP_BALBcJ_P0093238 Myo5a protein_coding protein_coding MGP_BALBcJ_T0093239.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72521905 72537602 + MGP_BALBcJ_P0093239 Myo5a protein_coding protein_coding MGP_BALBcJ_T0093240.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72526223 72529277 + Myo5a protein_coding retained_intron MGP_BALBcJ_T0093241.1 MGP_BALBcJ_G0035007.1 mouse_genomes_project 9 72530055 72540035 + Myo5a protein_coding retained_intron MGP_BALBcJ_T0099031.1 MGP_BALBcJ_G0037072.1 mouse_genomes_project 9 85814598 85816751 - Gm28229 sense_intronic sense_intronic MGP_BALBcJ_T0093464.1 MGP_BALBcJ_G0035063.1 mouse_genomes_project 9 83700375 83877756 - MGP_BALBcJ_P0093464 Ube2cbp protein_coding protein_coding MGP_BALBcJ_T0093465.1 MGP_BALBcJ_G0035063.1 mouse_genomes_project 9 83700811 83877756 - MGP_BALBcJ_P0093465 Ube2cbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009251.1 MGP_BALBcJ_G0007433.1 mouse_genomes_project 9 72749059 72756573 + 4933433G15Rik lincRNA lincRNA MGP_BALBcJ_T0009252.1 MGP_BALBcJ_G0007433.1 mouse_genomes_project 9 72749059 72754396 + 4933433G15Rik lincRNA lincRNA MGP_BALBcJ_T0091317.1 MGP_BALBcJ_G0034384.1 mouse_genomes_project 9 17071083 17072145 + MGP_BALBcJ_P0091317 Olfr873 protein_coding protein_coding MGP_BALBcJ_T0016020.1 MGP_BALBcJ_G0014117.1 mouse_genomes_project 9 56968570 56969057 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011040.1 MGP_BALBcJ_G0009165.1 mouse_genomes_project 9 42325499 42325564 - Mir7086 miRNA miRNA MGP_BALBcJ_T0091439.1 MGP_BALBcJ_G0034424.1 mouse_genomes_project 9 18306797 18326478 + MGP_BALBcJ_P0091439 AB124611 protein_coding protein_coding MGP_BALBcJ_T0091440.1 MGP_BALBcJ_G0034424.1 mouse_genomes_project 9 18306822 18326471 + MGP_BALBcJ_P0091440 AB124611 protein_coding protein_coding MGP_BALBcJ_T0091441.1 MGP_BALBcJ_G0034424.1 mouse_genomes_project 9 18306849 18326476 + MGP_BALBcJ_P0091441 AB124611 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093261.1 MGP_BALBcJ_G0035018.1 mouse_genomes_project 9 73120451 73247193 + MGP_BALBcJ_P0093261 Bmp5 protein_coding protein_coding MGP_BALBcJ_T0093262.1 MGP_BALBcJ_G0035018.1 mouse_genomes_project 9 73174443 73189752 + Bmp5 protein_coding processed_transcript MGP_BALBcJ_T0091827.1 MGP_BALBcJ_G0034575.1 mouse_genomes_project 9 35502817 35504791 + MGP_BALBcJ_P0091827 protein_coding protein_coding MGP_BALBcJ_T0094915.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108340121 108428081 + MGP_BALBcJ_P0094915 Setd2 protein_coding protein_coding MGP_BALBcJ_T0094916.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108355490 108428062 + MGP_BALBcJ_P0094916 Setd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094917.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108358816 108372165 + MGP_BALBcJ_P0094917 Setd2 protein_coding protein_coding MGP_BALBcJ_T0094918.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108368642 108375454 + Setd2 protein_coding retained_intron MGP_BALBcJ_T0094919.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108368724 108378247 + Setd2 protein_coding retained_intron MGP_BALBcJ_T0094920.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108381659 108428055 + MGP_BALBcJ_P0094920 Setd2 protein_coding protein_coding MGP_BALBcJ_T0094921.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108381921 108403196 + MGP_BALBcJ_P0094921 Setd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094922.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108403060 108414293 + Setd2 protein_coding retained_intron MGP_BALBcJ_T0094923.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108411359 108427596 + MGP_BALBcJ_P0094923 Setd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094924.1 MGP_BALBcJ_G0035326.1 mouse_genomes_project 9 108427048 108428055 + Setd2 protein_coding retained_intron MGP_BALBcJ_T0092958.1 MGP_BALBcJ_G0034955.1 mouse_genomes_project 9 64140646 64217837 - MGP_BALBcJ_P0092958 Rab8b protein_coding protein_coding MGP_BALBcJ_T0011034.1 MGP_BALBcJ_G0009159.1 mouse_genomes_project 9 38533787 38533883 + Mirlet7a-2 miRNA miRNA MGP_BALBcJ_T0092233.1 MGP_BALBcJ_G0034742.1 mouse_genomes_project 9 46209373 46213310 + Tmprss5 protein_coding retained_intron MGP_BALBcJ_T0092234.1 MGP_BALBcJ_G0034742.1 mouse_genomes_project 9 46209373 46224245 + MGP_BALBcJ_P0092234 Tmprss5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092235.1 MGP_BALBcJ_G0034742.1 mouse_genomes_project 9 46209466 46223651 + MGP_BALBcJ_P0092235 Tmprss5 protein_coding protein_coding MGP_BALBcJ_T0092236.1 MGP_BALBcJ_G0034742.1 mouse_genomes_project 9 46209466 46223651 + MGP_BALBcJ_P0092236 Tmprss5 protein_coding protein_coding MGP_BALBcJ_T0092237.1 MGP_BALBcJ_G0034742.1 mouse_genomes_project 9 46215652 46224245 + MGP_BALBcJ_P0092237 Tmprss5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091224.1 MGP_BALBcJ_G0034330.1 mouse_genomes_project 9 11562770 11580848 - MGP_BALBcJ_P0091224 Izumo1r protein_coding protein_coding MGP_BALBcJ_T0091225.1 MGP_BALBcJ_G0034330.1 mouse_genomes_project 9 11570012 11580913 - MGP_BALBcJ_P0091225 Izumo1r protein_coding protein_coding MGP_BALBcJ_T0091226.1 MGP_BALBcJ_G0034330.1 mouse_genomes_project 9 11576986 11580896 - MGP_BALBcJ_P0091226 Izumo1r protein_coding protein_coding MGP_BALBcJ_T0091227.1 MGP_BALBcJ_G0034330.1 mouse_genomes_project 9 11576991 11580720 - MGP_BALBcJ_P0091227 Izumo1r protein_coding protein_coding MGP_BALBcJ_T0091228.1 MGP_BALBcJ_G0034330.1 mouse_genomes_project 9 11577733 11580718 - MGP_BALBcJ_P0091228 Izumo1r protein_coding protein_coding MGP_BALBcJ_T0091095.1 MGP_BALBcJ_G0034287.1 mouse_genomes_project 9 2946254 2947774 - MGP_BALBcJ_P0091095 Ddi1 protein_coding protein_coding MGP_BALBcJ_T0092416.1 MGP_BALBcJ_G0034803.1 mouse_genomes_project 9 51877248 51885598 + MGP_BALBcJ_P0092416 Crabp1 protein_coding protein_coding MGP_BALBcJ_T0093252.1 MGP_BALBcJ_G0035012.1 mouse_genomes_project 9 72779783 72780314 - MGP_BALBcJ_P0093252 A130057D12Rik protein_coding protein_coding MGP_BALBcJ_T0092537.1 MGP_BALBcJ_G0034840.1 mouse_genomes_project 9 54690628 54702409 + MGP_BALBcJ_P0092537 Cox5a protein_coding protein_coding MGP_BALBcJ_T0002399.1 MGP_BALBcJ_G0002308.1 mouse_genomes_project 9 86117961 86118837 + TEC TEC MGP_BALBcJ_T0091802.1 MGP_BALBcJ_G0034551.1 mouse_genomes_project 9 34954163 34955736 + MGP_BALBcJ_P0091802 Olfr884 protein_coding protein_coding MGP_BALBcJ_T0091803.1 MGP_BALBcJ_G0034551.1 mouse_genomes_project 9 34954806 34955736 + MGP_BALBcJ_P0091803 Olfr884 protein_coding protein_coding MGP_BALBcJ_T0092216.1 MGP_BALBcJ_G0034731.1 mouse_genomes_project 9 45511484 45523903 + MGP_BALBcJ_P0092216 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0002350.1 MGP_BALBcJ_G0002260.1 mouse_genomes_project 9 31425001 31443303 + TEC TEC MGP_BALBcJ_T0093636.1 MGP_BALBcJ_G0035101.1 mouse_genomes_project 9 89745956 89752447 + MGP_BALBcJ_P0093636 Plscr2 protein_coding protein_coding MGP_BALBcJ_T0093637.1 MGP_BALBcJ_G0035101.1 mouse_genomes_project 9 89746200 89768010 + MGP_BALBcJ_P0093637 Plscr2 protein_coding protein_coding MGP_BALBcJ_T0093638.1 MGP_BALBcJ_G0035101.1 mouse_genomes_project 9 89761370 89762215 + Plscr2 protein_coding retained_intron MGP_BALBcJ_T0016053.1 MGP_BALBcJ_G0014150.1 mouse_genomes_project 9 75825007 75825574 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011019.1 MGP_BALBcJ_G0009144.1 mouse_genomes_project 9 11999949 12000008 + Mir7650 miRNA miRNA MGP_BALBcJ_T0100182.1 MGP_BALBcJ_G0038218.1 mouse_genomes_project 9 42947823 42947922 - Gm24646 snRNA snRNA MGP_BALBcJ_T0095345.1 MGP_BALBcJ_G0035445.1 mouse_genomes_project 9 121069599 121138471 + MGP_BALBcJ_P0095345 Kif15 protein_coding protein_coding MGP_BALBcJ_T0095346.1 MGP_BALBcJ_G0035445.1 mouse_genomes_project 9 121112934 121142964 + MGP_BALBcJ_P0095346 Kif15 protein_coding unknown_likely_coding MGP_BALBcJ_T0095183.1 MGP_BALBcJ_G0035389.1 mouse_genomes_project 9 117245863 117248346 + MGP_BALBcJ_P0095183 protein_coding protein_coding MGP_BALBcJ_T0091852.1 MGP_BALBcJ_G0034594.1 mouse_genomes_project 9 35966331 35967392 - MGP_BALBcJ_P0091852 Olfr146 protein_coding protein_coding MGP_BALBcJ_T0100179.1 MGP_BALBcJ_G0038215.1 mouse_genomes_project 9 40919362 40919467 - Gm23326 snRNA snRNA MGP_BALBcJ_T0005470.1 MGP_BALBcJ_G0004624.1 mouse_genomes_project 9 92970245 92971562 + Gm28424 antisense antisense MGP_BALBcJ_T0101482.1 MGP_BALBcJ_G0039518.1 mouse_genomes_project 9 72115039 72115182 + Gm22315 snoRNA snoRNA MGP_BALBcJ_T0092992.1 MGP_BALBcJ_G0034962.1 mouse_genomes_project 9 65166017 65316362 + MGP_BALBcJ_P0092992 Vps13c protein_coding protein_coding MGP_BALBcJ_T0092993.1 MGP_BALBcJ_G0034962.1 mouse_genomes_project 9 65166048 65304080 + MGP_BALBcJ_P0092993 Vps13c protein_coding unknown_likely_coding MGP_BALBcJ_T0094358.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105248166 105277377 - MGP_BALBcJ_P0094358 Sema3f protein_coding protein_coding MGP_BALBcJ_T0094359.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105249085 105272459 - MGP_BALBcJ_P0094359 Sema3f protein_coding protein_coding MGP_BALBcJ_T0094360.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105249789 105251430 - Sema3f protein_coding retained_intron MGP_BALBcJ_T0094361.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105249789 105276921 - MGP_BALBcJ_P0094361 Sema3f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094362.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105250659 105253939 - MGP_BALBcJ_P0094362 Sema3f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094363.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105250675 105251466 - Sema3f protein_coding retained_intron MGP_BALBcJ_T0094364.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105250798 105251440 - Sema3f protein_coding retained_intron MGP_BALBcJ_T0094365.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105253896 105259317 - Sema3f protein_coding processed_transcript MGP_BALBcJ_T0094366.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105254363 105259245 - MGP_BALBcJ_P0094366 Sema3f protein_coding protein_coding MGP_BALBcJ_T0094367.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105254377 105256522 - Sema3f protein_coding retained_intron MGP_BALBcJ_T0094368.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105254947 105276382 - MGP_BALBcJ_P0094368 Sema3f protein_coding protein_coding MGP_BALBcJ_T0094369.1 MGP_BALBcJ_G0035241.1 mouse_genomes_project 9 105256290 105259306 - MGP_BALBcJ_P0094369 Sema3f protein_coding protein_coding MGP_BALBcJ_T0002414.1 MGP_BALBcJ_G0002323.1 mouse_genomes_project 9 94778816 94780696 + TEC TEC MGP_BALBcJ_T0005433.1 MGP_BALBcJ_G0004598.1 mouse_genomes_project 9 54950423 55007793 + antisense antisense MGP_BALBcJ_T0005434.1 MGP_BALBcJ_G0004598.1 mouse_genomes_project 9 54999776 55008127 + antisense antisense MGP_BALBcJ_T0005435.1 MGP_BALBcJ_G0004598.1 mouse_genomes_project 9 55001178 55008032 + antisense antisense MGP_BALBcJ_T0092197.1 MGP_BALBcJ_G0034726.1 mouse_genomes_project 9 43371165 43388037 - MGP_BALBcJ_P0092197 4931429L15Rik protein_coding protein_coding MGP_BALBcJ_T0092198.1 MGP_BALBcJ_G0034726.1 mouse_genomes_project 9 43371822 43379192 - MGP_BALBcJ_P0092198 4931429L15Rik protein_coding protein_coding MGP_BALBcJ_T0092199.1 MGP_BALBcJ_G0034726.1 mouse_genomes_project 9 43377903 43383545 - MGP_BALBcJ_P0092199 4931429L15Rik protein_coding protein_coding MGP_BALBcJ_T0092474.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53221413 53261620 + MGP_BALBcJ_P0092474 Pstpip1 protein_coding protein_coding MGP_BALBcJ_T0092475.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53221427 53261608 + Pstpip1 protein_coding retained_intron MGP_BALBcJ_T0092476.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53221427 53261604 + Pstpip1 protein_coding retained_intron MGP_BALBcJ_T0092477.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53252771 53258418 + Pstpip1 protein_coding processed_transcript MGP_BALBcJ_T0092478.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53254574 53256242 + Pstpip1 protein_coding retained_intron MGP_BALBcJ_T0092479.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53255539 53258477 + Pstpip1 protein_coding retained_intron MGP_BALBcJ_T0092480.1 MGP_BALBcJ_G0034820.1 mouse_genomes_project 9 53255539 53256532 + Pstpip1 protein_coding retained_intron MGP_BALBcJ_T0092355.1 MGP_BALBcJ_G0034779.1 mouse_genomes_project 9 49817577 49823947 - MGP_BALBcJ_P0092355 AI593442 protein_coding protein_coding MGP_BALBcJ_T0092134.1 MGP_BALBcJ_G0034712.1 mouse_genomes_project 9 42832313 42895100 - MGP_BALBcJ_P0092134 Cep164 protein_coding protein_coding MGP_BALBcJ_T0092135.1 MGP_BALBcJ_G0034712.1 mouse_genomes_project 9 42832315 42895002 - MGP_BALBcJ_P0092135 Cep164 protein_coding unknown_likely_coding MGP_BALBcJ_T0092136.1 MGP_BALBcJ_G0034712.1 mouse_genomes_project 9 42836113 42837897 - Cep164 protein_coding retained_intron MGP_BALBcJ_T0092137.1 MGP_BALBcJ_G0034712.1 mouse_genomes_project 9 42843660 42867924 - MGP_BALBcJ_P0092137 Cep164 protein_coding protein_coding MGP_BALBcJ_T0016030.1 MGP_BALBcJ_G0014127.1 mouse_genomes_project 9 69503918 69504261 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092868.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850161 62859534 + MGP_BALBcJ_P0092868 Pif1 protein_coding protein_coding MGP_BALBcJ_T0092869.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850183 62850839 + MGP_BALBcJ_P0092869 Pif1 protein_coding protein_coding MGP_BALBcJ_T0092870.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850194 62859532 + MGP_BALBcJ_P0092870 Pif1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092871.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850206 62853494 + Pif1 protein_coding retained_intron MGP_BALBcJ_T0092872.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850206 62859537 + MGP_BALBcJ_P0092872 Pif1 protein_coding protein_coding MGP_BALBcJ_T0092873.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850214 62859537 + Pif1 protein_coding retained_intron MGP_BALBcJ_T0092874.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850222 62859537 + MGP_BALBcJ_P0092874 Pif1 protein_coding protein_coding MGP_BALBcJ_T0092875.1 MGP_BALBcJ_G0034936.1 mouse_genomes_project 9 62850227 62851282 + MGP_BALBcJ_P0092875 Pif1 protein_coding protein_coding MGP_BALBcJ_T0093537.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85820106 85856648 - MGP_BALBcJ_P0093537 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093538.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85825534 85854055 - MGP_BALBcJ_P0093538 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093539.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85825736 85855438 - MGP_BALBcJ_P0093539 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093540.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85825785 85855503 - MGP_BALBcJ_P0093540 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093541.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85827034 85855456 - MGP_BALBcJ_P0093541 Syncrip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093542.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85829220 85854043 - MGP_BALBcJ_P0093542 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093543.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85829220 85854043 - MGP_BALBcJ_P0093543 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093544.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85837572 85854034 - Syncrip protein_coding retained_intron MGP_BALBcJ_T0093545.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85849739 85854459 - MGP_BALBcJ_P0093545 Syncrip protein_coding protein_coding MGP_BALBcJ_T0093546.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85852014 85854514 - Syncrip protein_coding retained_intron MGP_BALBcJ_T0093547.1 MGP_BALBcJ_G0035078.1 mouse_genomes_project 9 85852951 85856663 - MGP_BALBcJ_P0093547 Syncrip protein_coding protein_coding MGP_BALBcJ_T0091879.1 MGP_BALBcJ_G0034615.1 mouse_genomes_project 9 36691890 36692829 + MGP_BALBcJ_P0091879 Olfr965 protein_coding protein_coding MGP_BALBcJ_T0002423.1 MGP_BALBcJ_G0002332.1 mouse_genomes_project 9 98223108 98224159 + TEC TEC MGP_BALBcJ_T0018517.1 MGP_BALBcJ_G0015688.1 mouse_genomes_project 9 83241355 83264913 - 9330154J02Rik processed_transcript processed_transcript MGP_BALBcJ_T0018518.1 MGP_BALBcJ_G0015688.1 mouse_genomes_project 9 83241355 83265756 - 9330154J02Rik processed_transcript antisense MGP_BALBcJ_T0018519.1 MGP_BALBcJ_G0015688.1 mouse_genomes_project 9 83241416 83265948 - 9330154J02Rik processed_transcript antisense MGP_BALBcJ_T0018520.1 MGP_BALBcJ_G0015688.1 mouse_genomes_project 9 83242626 83264912 - 9330154J02Rik processed_transcript retained_intron MGP_BALBcJ_T0002393.1 MGP_BALBcJ_G0002302.1 mouse_genomes_project 9 84115310 84116469 - TEC TEC MGP_BALBcJ_T0095152.1 MGP_BALBcJ_G0035383.1 mouse_genomes_project 9 116677429 116978985 + MGP_BALBcJ_P0095152 Itga9 protein_coding protein_coding MGP_BALBcJ_T0095153.1 MGP_BALBcJ_G0035383.1 mouse_genomes_project 9 116757353 116882713 + Itga9 protein_coding processed_transcript MGP_BALBcJ_T0095154.1 MGP_BALBcJ_G0035383.1 mouse_genomes_project 9 116786529 116975674 + MGP_BALBcJ_P0095154 Itga9 protein_coding protein_coding MGP_BALBcJ_T0095155.1 MGP_BALBcJ_G0035383.1 mouse_genomes_project 9 116882765 116920734 + MGP_BALBcJ_P0095155 Itga9 protein_coding protein_coding MGP_BALBcJ_T0095156.1 MGP_BALBcJ_G0035383.1 mouse_genomes_project 9 116916513 116949060 + Itga9 protein_coding processed_transcript MGP_BALBcJ_T0095157.1 MGP_BALBcJ_G0035383.1 mouse_genomes_project 9 116949188 116975263 + Itga9 protein_coding processed_transcript MGP_BALBcJ_T0009190.1 MGP_BALBcJ_G0007382.1 mouse_genomes_project 9 18500018 18505880 - Gm26511 lincRNA lincRNA MGP_BALBcJ_T0005512.1 MGP_BALBcJ_G0004653.1 mouse_genomes_project 9 105125038 105134645 - Gm9917 antisense antisense MGP_BALBcJ_T0005513.1 MGP_BALBcJ_G0004653.1 mouse_genomes_project 9 105129066 105134648 - Gm9917 antisense antisense MGP_BALBcJ_T0005514.1 MGP_BALBcJ_G0004653.1 mouse_genomes_project 9 105129972 105133157 - Gm9917 antisense antisense MGP_BALBcJ_T0005515.1 MGP_BALBcJ_G0004653.1 mouse_genomes_project 9 105130576 105133013 - Gm9917 antisense antisense MGP_BALBcJ_T0016074.1 MGP_BALBcJ_G0014171.1 mouse_genomes_project 9 87471410 87472057 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018538.1 MGP_BALBcJ_G0015695.1 mouse_genomes_project 9 99298697 99394573 - Gm29521 processed_transcript lincRNA MGP_BALBcJ_T0018539.1 MGP_BALBcJ_G0015695.1 mouse_genomes_project 9 99391404 99394615 - Gm29521 processed_transcript retained_intron MGP_BALBcJ_T0002379.1 MGP_BALBcJ_G0002289.1 mouse_genomes_project 9 70902113 70904131 - TEC TEC MGP_BALBcJ_T0000341.1 MGP_BALBcJ_G0000282.1 mouse_genomes_project 9 121227071 121227138 - mt-Tw Mt_tRNA Mt_tRNA MGP_BALBcJ_T0016087.1 MGP_BALBcJ_G0014184.1 mouse_genomes_project 9 91866014 91866588 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100201.1 MGP_BALBcJ_G0038237.1 mouse_genomes_project 9 67882662 67882770 + Gm22229 snRNA snRNA MGP_BALBcJ_T0092086.1 MGP_BALBcJ_G0034692.1 mouse_genomes_project 9 41850604 41854156 - MGP_BALBcJ_P0092086 Ttc36 protein_coding protein_coding MGP_BALBcJ_T0094925.1 MGP_BALBcJ_G0035327.1 mouse_genomes_project 9 108430583 108433901 - MGP_BALBcJ_P0094925 Nradd protein_coding protein_coding MGP_BALBcJ_T0094926.1 MGP_BALBcJ_G0035327.1 mouse_genomes_project 9 108430956 108432771 - MGP_BALBcJ_P0094926 Nradd protein_coding protein_coding MGP_BALBcJ_T0094927.1 MGP_BALBcJ_G0035327.1 mouse_genomes_project 9 108431333 108433827 - MGP_BALBcJ_P0094927 Nradd protein_coding protein_coding MGP_BALBcJ_T0094928.1 MGP_BALBcJ_G0035327.1 mouse_genomes_project 9 108432028 108433880 - Nradd protein_coding retained_intron MGP_BALBcJ_T0002444.1 MGP_BALBcJ_G0002353.1 mouse_genomes_project 9 101865691 101868665 - TEC TEC MGP_BALBcJ_T0092239.1 MGP_BALBcJ_G0034744.1 mouse_genomes_project 9 46445153 46514727 + MGP_BALBcJ_P0092239 Drd2 protein_coding protein_coding MGP_BALBcJ_T0091553.1 MGP_BALBcJ_G0034470.1 mouse_genomes_project 9 23625245 23664423 - MGP_BALBcJ_P0091553 Glb1l3 protein_coding protein_coding MGP_BALBcJ_T0093277.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492932 74532083 - protein_coding retained_intron MGP_BALBcJ_T0093278.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492932 74739017 - MGP_BALBcJ_P0093278 protein_coding protein_coding MGP_BALBcJ_T0093279.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492932 74739010 - MGP_BALBcJ_P0093279 protein_coding protein_coding MGP_BALBcJ_T0093280.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492937 74738948 - MGP_BALBcJ_P0093280 protein_coding protein_coding MGP_BALBcJ_T0093281.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492937 74738940 - MGP_BALBcJ_P0093281 protein_coding protein_coding MGP_BALBcJ_T0093282.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492940 74646683 - MGP_BALBcJ_P0093282 protein_coding protein_coding MGP_BALBcJ_T0093283.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492940 74739063 - MGP_BALBcJ_P0093283 protein_coding protein_coding MGP_BALBcJ_T0093284.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74492963 74531832 - MGP_BALBcJ_P0093284 protein_coding protein_coding MGP_BALBcJ_T0093285.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74493161 74646729 - MGP_BALBcJ_P0093285 protein_coding protein_coding MGP_BALBcJ_T0093286.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74493242 74646645 - MGP_BALBcJ_P0093286 protein_coding unknown_likely_coding MGP_BALBcJ_T0093287.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74556160 74739008 - MGP_BALBcJ_P0093287 protein_coding protein_coding MGP_BALBcJ_T0093288.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74624438 74738998 - MGP_BALBcJ_P0093288 protein_coding protein_coding MGP_BALBcJ_T0093289.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74624441 74646692 - MGP_BALBcJ_P0093289 protein_coding protein_coding MGP_BALBcJ_T0093290.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74624469 74731733 - MGP_BALBcJ_P0093290 protein_coding protein_coding MGP_BALBcJ_T0093291.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74644199 74646986 - protein_coding retained_intron MGP_BALBcJ_T0093292.1 MGP_BALBcJ_G0035024.1 mouse_genomes_project 9 74737576 74743732 - protein_coding processed_transcript MGP_BALBcJ_T0092801.1 MGP_BALBcJ_G0034909.1 mouse_genomes_project 9 61413780 61419078 + MGP_BALBcJ_P0092801 Rpl4 protein_coding protein_coding MGP_BALBcJ_T0011054.1 MGP_BALBcJ_G0009179.1 mouse_genomes_project 9 62221182 62221509 - miRNA miRNA MGP_BALBcJ_T0092534.1 MGP_BALBcJ_G0034837.1 mouse_genomes_project 9 54571768 54600337 - MGP_BALBcJ_P0092534 Ppcdc protein_coding protein_coding MGP_BALBcJ_T0092533.1 MGP_BALBcJ_G0034836.1 mouse_genomes_project 9 54413993 54424271 - MGP_BALBcJ_P0092533 1700017B05Rik protein_coding protein_coding MGP_BALBcJ_T0091415.1 MGP_BALBcJ_G0034418.1 mouse_genomes_project 9 18073308 18090327 - MGP_BALBcJ_P0091415 Ap1m2 protein_coding protein_coding MGP_BALBcJ_T0091416.1 MGP_BALBcJ_G0034418.1 mouse_genomes_project 9 18073308 18090327 - MGP_BALBcJ_P0091416 Ap1m2 protein_coding protein_coding MGP_BALBcJ_T0095096.1 MGP_BALBcJ_G0035360.1 mouse_genomes_project 9 112263479 112264049 + MGP_BALBcJ_P0095096 Bcl2a1c protein_coding protein_coding MGP_BALBcJ_T0091644.1 MGP_BALBcJ_G0034498.1 mouse_genomes_project 9 31991054 32043604 - MGP_BALBcJ_P0091644 Dcps protein_coding protein_coding MGP_BALBcJ_T0091645.1 MGP_BALBcJ_G0034498.1 mouse_genomes_project 9 31991058 32043602 - MGP_BALBcJ_P0091645 Dcps protein_coding protein_coding MGP_BALBcJ_T0091646.1 MGP_BALBcJ_G0034498.1 mouse_genomes_project 9 31992953 32043536 - MGP_BALBcJ_P0091646 Dcps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092187.1 MGP_BALBcJ_G0034724.1 mouse_genomes_project 9 43340733 43349029 + MGP_BALBcJ_P0092187 Zpr1 protein_coding protein_coding MGP_BALBcJ_T0092188.1 MGP_BALBcJ_G0034724.1 mouse_genomes_project 9 43340733 43350188 + MGP_BALBcJ_P0092188 Zpr1 protein_coding protein_coding MGP_BALBcJ_T0092189.1 MGP_BALBcJ_G0034724.1 mouse_genomes_project 9 43340825 43343326 + MGP_BALBcJ_P0092189 Zpr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092190.1 MGP_BALBcJ_G0034724.1 mouse_genomes_project 9 43341168 43344274 + Zpr1 protein_coding retained_intron MGP_BALBcJ_T0092191.1 MGP_BALBcJ_G0034724.1 mouse_genomes_project 9 43342993 43344146 + Zpr1 protein_coding retained_intron MGP_BALBcJ_T0092192.1 MGP_BALBcJ_G0034724.1 mouse_genomes_project 9 43343670 43345193 + Zpr1 protein_coding retained_intron MGP_BALBcJ_T0095220.1 MGP_BALBcJ_G0035404.1 mouse_genomes_project 9 118072638 118085701 - MGP_BALBcJ_P0095220 Csrnp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0002364.1 MGP_BALBcJ_G0002274.1 mouse_genomes_project 9 69649075 69651132 + TEC TEC MGP_BALBcJ_T0098681.1 MGP_BALBcJ_G0036735.1 mouse_genomes_project 9 100557391 100557495 - n-R5s89 rRNA rRNA MGP_BALBcJ_T0011014.1 MGP_BALBcJ_G0009139.1 mouse_genomes_project 9 4498362 4498413 + Mir5618 miRNA miRNA MGP_BALBcJ_T0002363.1 MGP_BALBcJ_G0002273.1 mouse_genomes_project 9 69368684 69371359 - TEC TEC MGP_BALBcJ_T0094297.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105145167 105149808 + MGP_BALBcJ_P0094297 Nat6 protein_coding protein_coding MGP_BALBcJ_T0094298.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105145167 105149808 + MGP_BALBcJ_P0094298 Nat6 protein_coding protein_coding MGP_BALBcJ_T0094299.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105145167 105149808 + MGP_BALBcJ_P0094299 Nat6 protein_coding protein_coding MGP_BALBcJ_T0094300.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105145167 105149808 + MGP_BALBcJ_P0094300 Nat6 protein_coding protein_coding MGP_BALBcJ_T0094301.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105145167 105149808 + MGP_BALBcJ_P0094301 Nat6 protein_coding protein_coding MGP_BALBcJ_T0094302.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105145167 105149808 + MGP_BALBcJ_P0094302 Nat6 protein_coding protein_coding MGP_BALBcJ_T0094304.1 MGP_BALBcJ_G0035234.1 mouse_genomes_project 9 105146401 105150339 + MGP_BALBcJ_P0094304 Nat6 protein_coding protein_coding MGP_BALBcJ_T0091806.1 MGP_BALBcJ_G0034554.1 mouse_genomes_project 9 35020851 35021796 + MGP_BALBcJ_P0091806 Olfr888 protein_coding protein_coding MGP_BALBcJ_T0093453.1 MGP_BALBcJ_G0035060.1 mouse_genomes_project 9 82734067 82740968 - MGP_BALBcJ_P0093453 Fam46a protein_coding protein_coding MGP_BALBcJ_T0093454.1 MGP_BALBcJ_G0035060.1 mouse_genomes_project 9 82734067 82740744 - MGP_BALBcJ_P0093454 Fam46a protein_coding protein_coding MGP_BALBcJ_T0091816.1 MGP_BALBcJ_G0034564.1 mouse_genomes_project 9 35288219 35289215 + MGP_BALBcJ_P0091816 Olfr250 protein_coding protein_coding MGP_BALBcJ_T0002358.1 MGP_BALBcJ_G0002268.1 mouse_genomes_project 9 69232971 69235713 - TEC TEC MGP_BALBcJ_T0091655.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32071426 32078169 - MGP_BALBcJ_P0091655 Foxred1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091656.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32071428 32078187 - Foxred1 protein_coding retained_intron MGP_BALBcJ_T0091657.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32071428 32078203 - Foxred1 protein_coding retained_intron MGP_BALBcJ_T0091658.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32071428 32078288 - MGP_BALBcJ_P0091658 Foxred1 protein_coding protein_coding MGP_BALBcJ_T0091659.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32071428 32078234 - MGP_BALBcJ_P0091659 Foxred1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091660.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32071428 32078213 - MGP_BALBcJ_P0091660 Foxred1 protein_coding protein_coding MGP_BALBcJ_T0091661.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32072085 32073142 - Foxred1 protein_coding retained_intron MGP_BALBcJ_T0091662.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32072404 32073454 - MGP_BALBcJ_P0091662 Foxred1 protein_coding protein_coding MGP_BALBcJ_T0091663.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32073306 32078179 - Foxred1 protein_coding retained_intron MGP_BALBcJ_T0091664.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32073442 32078229 - MGP_BALBcJ_P0091664 Foxred1 protein_coding protein_coding MGP_BALBcJ_T0091665.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32074757 32078155 - MGP_BALBcJ_P0091665 Foxred1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091666.1 MGP_BALBcJ_G0034501.1 mouse_genomes_project 9 32074767 32078130 - MGP_BALBcJ_P0091666 Foxred1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093983.1 MGP_BALBcJ_G0035176.1 mouse_genomes_project 9 101603123 101640994 + MGP_BALBcJ_P0093983 Gm28305 protein_coding protein_coding MGP_BALBcJ_T0005408.1 MGP_BALBcJ_G0004583.1 mouse_genomes_project 9 37699128 37700151 - Gm16095 antisense antisense MGP_BALBcJ_T0095312.1 MGP_BALBcJ_G0035431.1 mouse_genomes_project 9 120035626 120037576 - MGP_BALBcJ_P0095312 Cyp8b1 protein_coding protein_coding MGP_BALBcJ_T0091460.1 MGP_BALBcJ_G0034430.1 mouse_genomes_project 9 18538600 18543413 - MGP_BALBcJ_P0091460 Spc24 protein_coding protein_coding MGP_BALBcJ_T0002343.1 MGP_BALBcJ_G0002253.1 mouse_genomes_project 9 29343594 29346650 - TEC TEC MGP_BALBcJ_T0016065.1 MGP_BALBcJ_G0014162.1 mouse_genomes_project 9 83206797 83207605 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009232.1 MGP_BALBcJ_G0007418.1 mouse_genomes_project 9 58575491 58576888 - Gm10655 lincRNA lincRNA MGP_BALBcJ_T0009233.1 MGP_BALBcJ_G0007418.1 mouse_genomes_project 9 58575572 58576322 - Gm10655 lincRNA lincRNA MGP_BALBcJ_T0092859.1 MGP_BALBcJ_G0034932.1 mouse_genomes_project 9 62696103 62713565 + MGP_BALBcJ_P0092859 Mtfmt protein_coding protein_coding MGP_BALBcJ_T0092860.1 MGP_BALBcJ_G0034932.1 mouse_genomes_project 9 62696109 62712928 + Mtfmt protein_coding retained_intron MGP_BALBcJ_T0092861.1 MGP_BALBcJ_G0034932.1 mouse_genomes_project 9 62697346 62707788 + Mtfmt protein_coding processed_transcript MGP_BALBcJ_T0092862.1 MGP_BALBcJ_G0034932.1 mouse_genomes_project 9 62704051 62712636 + Mtfmt protein_coding retained_intron MGP_BALBcJ_T0094904.1 MGP_BALBcJ_G0035324.1 mouse_genomes_project 9 108231440 108281101 - MGP_BALBcJ_P0094904 Klhl18 protein_coding protein_coding MGP_BALBcJ_T0094905.1 MGP_BALBcJ_G0035324.1 mouse_genomes_project 9 108231448 108281097 - MGP_BALBcJ_P0094905 Klhl18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094906.1 MGP_BALBcJ_G0035324.1 mouse_genomes_project 9 108231448 108281196 - MGP_BALBcJ_P0094906 Klhl18 protein_coding protein_coding MGP_BALBcJ_T0094907.1 MGP_BALBcJ_G0035324.1 mouse_genomes_project 9 108236864 108238727 - Klhl18 protein_coding retained_intron MGP_BALBcJ_T0094908.1 MGP_BALBcJ_G0035324.1 mouse_genomes_project 9 108242323 108259121 - MGP_BALBcJ_P0094908 Klhl18 protein_coding protein_coding MGP_BALBcJ_T0094909.1 MGP_BALBcJ_G0035324.1 mouse_genomes_project 9 108243542 108251702 - Klhl18 protein_coding retained_intron MGP_BALBcJ_T0005526.1 MGP_BALBcJ_G0004664.1 mouse_genomes_project 9 108479138 108484578 - Gm42762 antisense antisense MGP_BALBcJ_T0092442.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52333020 52397228 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0092443.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52333021 52397258 - MGP_BALBcJ_P0092443 Nrg4 protein_coding protein_coding MGP_BALBcJ_T0092444.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52334020 52356147 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0092445.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52334096 52397220 - MGP_BALBcJ_P0092445 Nrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092446.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52334099 52440484 - MGP_BALBcJ_P0092446 Nrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092447.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52334100 52397205 - MGP_BALBcJ_P0092447 Nrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092448.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52334164 52397214 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0092449.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52337824 52397205 - MGP_BALBcJ_P0092449 Nrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092450.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52354385 52397235 - MGP_BALBcJ_P0092450 Nrg4 protein_coding protein_coding MGP_BALBcJ_T0092451.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52355749 52440579 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0092452.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52362828 52397220 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0092453.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52372231 52397231 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0092454.1 MGP_BALBcJ_G0034813.1 mouse_genomes_project 9 52419940 52438924 - Nrg4 protein_coding processed_transcript MGP_BALBcJ_T0005495.1 MGP_BALBcJ_G0004640.1 mouse_genomes_project 9 102783394 102786121 + Gm20643 antisense antisense MGP_BALBcJ_T0092337.1 MGP_BALBcJ_G0034770.1 mouse_genomes_project 9 48261418 48265115 + MGP_BALBcJ_P0092337 Btg4 protein_coding protein_coding MGP_BALBcJ_T0092432.1 MGP_BALBcJ_G0034809.1 mouse_genomes_project 9 52131379 52145838 - MGP_BALBcJ_P0092432 Chrna3 protein_coding protein_coding MGP_BALBcJ_T0091531.1 MGP_BALBcJ_G0034462.1 mouse_genomes_project 9 21373620 21525725 - MGP_BALBcJ_P0091531 Dpy19l2 protein_coding protein_coding MGP_BALBcJ_T0016029.1 MGP_BALBcJ_G0014126.1 mouse_genomes_project 9 69457772 69458577 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100177.1 MGP_BALBcJ_G0038213.1 mouse_genomes_project 9 34724456 34724655 - Gm24764 snRNA snRNA MGP_BALBcJ_T0005540.1 MGP_BALBcJ_G0004674.1 mouse_genomes_project 9 119937651 119948570 + Gm17163 antisense antisense MGP_BALBcJ_T0092915.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63350718 63387634 - MGP_BALBcJ_P0092915 Snx1 protein_coding protein_coding MGP_BALBcJ_T0092916.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63351709 63353933 - Snx1 protein_coding retained_intron MGP_BALBcJ_T0092917.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63356772 63359167 - Snx1 protein_coding retained_intron MGP_BALBcJ_T0092918.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63359134 63364269 - Snx1 protein_coding retained_intron MGP_BALBcJ_T0092919.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63359981 63389337 - MGP_BALBcJ_P0092919 Snx1 protein_coding protein_coding MGP_BALBcJ_T0092920.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63367091 63368344 - Snx1 protein_coding retained_intron MGP_BALBcJ_T0092921.1 MGP_BALBcJ_G0034945.1 mouse_genomes_project 9 63371773 63387545 - Snx1 protein_coding retained_intron MGP_BALBcJ_T0094553.1 MGP_BALBcJ_G0035270.1 mouse_genomes_project 9 106046545 106055785 + MGP_BALBcJ_P0094553 BC048562 protein_coding protein_coding MGP_BALBcJ_T0094554.1 MGP_BALBcJ_G0035270.1 mouse_genomes_project 9 106046557 106055585 + BC048562 protein_coding processed_transcript MGP_BALBcJ_T0095103.1 MGP_BALBcJ_G0035366.1 mouse_genomes_project 9 112472202 112472930 + MGP_BALBcJ_P0095103 protein_coding protein_coding MGP_BALBcJ_T0091337.1 MGP_BALBcJ_G0034389.1 mouse_genomes_project 9 17263144 17289487 - MGP_BALBcJ_P0091337 Zfp266 protein_coding protein_coding MGP_BALBcJ_T0091338.1 MGP_BALBcJ_G0034389.1 mouse_genomes_project 9 17267137 17289478 - MGP_BALBcJ_P0091338 Zfp266 protein_coding protein_coding MGP_BALBcJ_T0100169.1 MGP_BALBcJ_G0038205.1 mouse_genomes_project 9 16945969 16946122 + Gm25914 snRNA snRNA MGP_BALBcJ_T0093888.1 MGP_BALBcJ_G0035157.1 mouse_genomes_project 9 99457781 99895002 - MGP_BALBcJ_P0093888 Ephb1 protein_coding protein_coding MGP_BALBcJ_T0093889.1 MGP_BALBcJ_G0035157.1 mouse_genomes_project 9 99458224 99895002 - MGP_BALBcJ_P0093889 Ephb1 protein_coding protein_coding MGP_BALBcJ_T0093891.1 MGP_BALBcJ_G0035157.1 mouse_genomes_project 9 99579360 99895002 - MGP_BALBcJ_P0093891 Ephb1 protein_coding protein_coding MGP_BALBcJ_T0002351.1 MGP_BALBcJ_G0002261.1 mouse_genomes_project 9 32231157 32232310 - TEC TEC MGP_BALBcJ_T0009224.1 MGP_BALBcJ_G0007411.1 mouse_genomes_project 9 54336422 54347544 + 1700041C23Rik lincRNA lincRNA MGP_BALBcJ_T0092293.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47875135 47879924 - MGP_BALBcJ_P0092293 1110032A03Rik protein_coding protein_coding MGP_BALBcJ_T0092294.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47875735 47878134 - MGP_BALBcJ_P0092294 1110032A03Rik protein_coding protein_coding MGP_BALBcJ_T0092295.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47875757 47887533 - 1110032A03Rik protein_coding retained_intron MGP_BALBcJ_T0092296.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47875760 47876593 - 1110032A03Rik protein_coding retained_intron MGP_BALBcJ_T0092297.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47875887 47880185 - MGP_BALBcJ_P0092297 1110032A03Rik protein_coding protein_coding MGP_BALBcJ_T0092298.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47876728 47880123 - 1110032A03Rik protein_coding processed_transcript MGP_BALBcJ_T0092299.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47876842 47880194 - 1110032A03Rik protein_coding processed_transcript MGP_BALBcJ_T0092303.1 MGP_BALBcJ_G0034763.1 mouse_genomes_project 9 47880618 47882969 - 1110032A03Rik protein_coding processed_transcript MGP_BALBcJ_T0092051.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736288 41778071 - MGP_BALBcJ_P0092051 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092052.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736292 41763220 - MGP_BALBcJ_P0092052 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092053.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736292 41785146 - MGP_BALBcJ_P0092053 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092054.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736292 41778050 - MGP_BALBcJ_P0092054 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092055.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736292 41765596 - MGP_BALBcJ_P0092055 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092056.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736292 41763245 - MGP_BALBcJ_P0092056 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092057.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736294 41751704 - MGP_BALBcJ_P0092057 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092058.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736294 41766353 - MGP_BALBcJ_P0092058 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092059.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41736294 41778071 - MGP_BALBcJ_P0092059 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092060.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41737618 41747816 - Phldb1 protein_coding retained_intron MGP_BALBcJ_T0092061.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41744434 41746402 - Phldb1 protein_coding retained_intron MGP_BALBcJ_T0092062.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41747704 41754079 - MGP_BALBcJ_P0092062 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092063.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41750932 41760927 - MGP_BALBcJ_P0092063 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092064.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41753543 41758398 - MGP_BALBcJ_P0092064 Phldb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092065.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41766096 41771393 - MGP_BALBcJ_P0092065 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092066.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41766266 41771356 - MGP_BALBcJ_P0092066 Phldb1 protein_coding protein_coding MGP_BALBcJ_T0092067.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41768304 41777321 - Phldb1 protein_coding retained_intron MGP_BALBcJ_T0092068.1 MGP_BALBcJ_G0034688.1 mouse_genomes_project 9 41775980 41776457 - Phldb1 protein_coding processed_transcript MGP_BALBcJ_T0094870.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107912670 107942034 + MGP_BALBcJ_P0094870 Smarcc1 protein_coding protein_coding MGP_BALBcJ_T0094871.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107926957 108039678 + MGP_BALBcJ_P0094871 Smarcc1 protein_coding protein_coding MGP_BALBcJ_T0094872.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107927014 108011182 + Smarcc1 protein_coding retained_intron MGP_BALBcJ_T0094873.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107927014 108034119 + MGP_BALBcJ_P0094873 Smarcc1 protein_coding protein_coding MGP_BALBcJ_T0094874.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107927014 107980606 + MGP_BALBcJ_P0094874 Smarcc1 protein_coding protein_coding MGP_BALBcJ_T0094875.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107927014 108039678 + MGP_BALBcJ_P0094875 Smarcc1 protein_coding protein_coding MGP_BALBcJ_T0094876.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 107982034 108003472 + Smarcc1 protein_coding retained_intron MGP_BALBcJ_T0094877.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 108033735 108036223 + MGP_BALBcJ_P0094877 Smarcc1 protein_coding protein_coding MGP_BALBcJ_T0094878.1 MGP_BALBcJ_G0035318.1 mouse_genomes_project 9 108035216 108036214 + Smarcc1 protein_coding retained_intron MGP_BALBcJ_T0018489.1 MGP_BALBcJ_G0015675.1 mouse_genomes_project 9 41132938 41134598 - Gm20444 processed_transcript processed_transcript MGP_BALBcJ_T0091151.1 MGP_BALBcJ_G0034307.1 mouse_genomes_project 9 5258213 5399833 + MGP_BALBcJ_P0091151 Trpc6 protein_coding protein_coding MGP_BALBcJ_T0009258.1 MGP_BALBcJ_G0007439.1 mouse_genomes_project 9 78572205 78595470 + Gm26713 lincRNA lincRNA MGP_BALBcJ_T0092846.1 MGP_BALBcJ_G0034924.1 mouse_genomes_project 9 62467493 62494097 + MGP_BALBcJ_P0092846 Parp16 protein_coding protein_coding MGP_BALBcJ_T0093315.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75516390 75575302 + MGP_BALBcJ_P0093315 Ick protein_coding protein_coding MGP_BALBcJ_T0093316.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75516433 75520626 + MGP_BALBcJ_P0093316 Ick protein_coding protein_coding MGP_BALBcJ_T0093317.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75520039 75525670 + Ick protein_coding processed_transcript MGP_BALBcJ_T0093318.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75520437 75541320 + Ick protein_coding retained_intron MGP_BALBcJ_T0093319.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75520480 75532857 + MGP_BALBcJ_P0093319 Ick protein_coding protein_coding MGP_BALBcJ_T0093320.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75520496 75572776 + MGP_BALBcJ_P0093320 Ick protein_coding protein_coding MGP_BALBcJ_T0093321.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75520511 75579481 + MGP_BALBcJ_P0093321 Ick protein_coding protein_coding MGP_BALBcJ_T0093322.1 MGP_BALBcJ_G0035031.1 mouse_genomes_project 9 75562849 75577827 + Ick protein_coding retained_intron MGP_BALBcJ_T0092402.1 MGP_BALBcJ_G0034798.1 mouse_genomes_project 9 51656214 51673309 - MGP_BALBcJ_P0092402 Cib2 protein_coding protein_coding MGP_BALBcJ_T0098673.1 MGP_BALBcJ_G0036727.1 mouse_genomes_project 9 61286537 61286632 + Gm25606 rRNA rRNA MGP_BALBcJ_T0091261.1 MGP_BALBcJ_G0034341.1 mouse_genomes_project 9 12526070 12578298 - MGP_BALBcJ_P0091261 Mtnr1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091262.1 MGP_BALBcJ_G0034341.1 mouse_genomes_project 9 12566112 12578202 - MGP_BALBcJ_P0091262 Mtnr1b protein_coding protein_coding MGP_BALBcJ_T0091487.1 MGP_BALBcJ_G0034445.1 mouse_genomes_project 9 18858116 18871412 - MGP_BALBcJ_P0091487 Ecsit protein_coding protein_coding MGP_BALBcJ_T0091488.1 MGP_BALBcJ_G0034445.1 mouse_genomes_project 9 18858116 18871423 - MGP_BALBcJ_P0091488 Ecsit protein_coding protein_coding MGP_BALBcJ_T0091489.1 MGP_BALBcJ_G0034445.1 mouse_genomes_project 9 18858116 18871387 - MGP_BALBcJ_P0091489 Ecsit protein_coding protein_coding MGP_BALBcJ_T0091490.1 MGP_BALBcJ_G0034445.1 mouse_genomes_project 9 18859352 18871412 - MGP_BALBcJ_P0091490 Ecsit protein_coding protein_coding MGP_BALBcJ_T0092568.1 MGP_BALBcJ_G0034855.1 mouse_genomes_project 9 55185691 55200477 + MGP_BALBcJ_P0092568 Cyp11a1 protein_coding protein_coding MGP_BALBcJ_T0092569.1 MGP_BALBcJ_G0034855.1 mouse_genomes_project 9 55194149 55206557 + MGP_BALBcJ_P0092569 Cyp11a1 protein_coding protein_coding MGP_BALBcJ_T0092570.1 MGP_BALBcJ_G0034855.1 mouse_genomes_project 9 55194475 55202121 + Cyp11a1 protein_coding retained_intron MGP_BALBcJ_T0092571.1 MGP_BALBcJ_G0034855.1 mouse_genomes_project 9 55197130 55204777 + MGP_BALBcJ_P0092571 Cyp11a1 protein_coding protein_coding MGP_BALBcJ_T0092953.1 MGP_BALBcJ_G0034952.1 mouse_genomes_project 9 64062066 64088131 - MGP_BALBcJ_P0092953 Aph1b protein_coding protein_coding MGP_BALBcJ_T0092954.1 MGP_BALBcJ_G0034952.1 mouse_genomes_project 9 64062073 64088077 - MGP_BALBcJ_P0092954 Aph1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092955.1 MGP_BALBcJ_G0034952.1 mouse_genomes_project 9 64067581 64088017 - MGP_BALBcJ_P0092955 Aph1b protein_coding protein_coding MGP_BALBcJ_T0091579.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25836811 26831234 - MGP_BALBcJ_P0091579 Ntm protein_coding protein_coding MGP_BALBcJ_T0091580.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25838068 26256573 - MGP_BALBcJ_P0091580 Ntm protein_coding protein_coding MGP_BALBcJ_T0091581.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25838287 25856276 - MGP_BALBcJ_P0091581 Ntm protein_coding protein_coding MGP_BALBcJ_T0091582.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25838550 25856276 - MGP_BALBcJ_P0091582 Ntm protein_coding protein_coding MGP_BALBcJ_T0091583.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25851118 26256105 - MGP_BALBcJ_P0091583 Ntm protein_coding protein_coding MGP_BALBcJ_T0091584.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25851244 26028918 - Ntm protein_coding processed_transcript MGP_BALBcJ_T0091585.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25851267 25952016 - Ntm protein_coding processed_transcript MGP_BALBcJ_T0091586.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 25855254 26831235 - Ntm protein_coding retained_intron MGP_BALBcJ_T0091587.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 26019709 26831235 - Ntm protein_coding retained_intron MGP_BALBcJ_T0091588.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 26255956 26831224 - Ntm protein_coding processed_transcript MGP_BALBcJ_T0091589.1 MGP_BALBcJ_G0034480.1 mouse_genomes_project 9 26809968 26831246 - Ntm protein_coding processed_transcript MGP_BALBcJ_T0093668.1 MGP_BALBcJ_G0035110.1 mouse_genomes_project 9 93101196 93161303 + MGP_BALBcJ_P0093668 Pcolce2 protein_coding protein_coding MGP_BALBcJ_T0093669.1 MGP_BALBcJ_G0035110.1 mouse_genomes_project 9 93143487 93157889 + Pcolce2 protein_coding processed_transcript MGP_BALBcJ_T0091339.1 MGP_BALBcJ_G0034390.1 mouse_genomes_project 9 17351682 17365453 + MGP_BALBcJ_P0091339 Zfp846 protein_coding protein_coding MGP_BALBcJ_T0091340.1 MGP_BALBcJ_G0034390.1 mouse_genomes_project 9 17351882 17365455 + MGP_BALBcJ_P0091340 Zfp846 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091341.1 MGP_BALBcJ_G0034390.1 mouse_genomes_project 9 17358151 17364732 + MGP_BALBcJ_P0091341 Zfp846 protein_coding protein_coding MGP_BALBcJ_T0100196.1 MGP_BALBcJ_G0038232.1 mouse_genomes_project 9 64285933 64286031 - Gm24225 snRNA snRNA MGP_BALBcJ_T0100185.1 MGP_BALBcJ_G0038221.1 mouse_genomes_project 9 46939523 46939630 - Gm25633 snRNA snRNA MGP_BALBcJ_T0100164.1 MGP_BALBcJ_G0038200.1 mouse_genomes_project 9 3394695 3394800 - Gm23097 snRNA snRNA MGP_BALBcJ_T0091907.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37260881 37313901 - MGP_BALBcJ_P0091907 Gramd1b protein_coding protein_coding MGP_BALBcJ_T0091908.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37260887 37505736 - MGP_BALBcJ_P0091908 Gramd1b protein_coding protein_coding MGP_BALBcJ_T0091909.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37260893 37433319 - MGP_BALBcJ_P0091909 Gramd1b protein_coding protein_coding MGP_BALBcJ_T0091910.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37265523 37362331 - MGP_BALBcJ_P0091910 Gramd1b protein_coding protein_coding MGP_BALBcJ_T0091911.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37265554 37433413 - MGP_BALBcJ_P0091911 Gramd1b protein_coding protein_coding MGP_BALBcJ_T0091912.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37265637 37313523 - MGP_BALBcJ_P0091912 Gramd1b protein_coding protein_coding MGP_BALBcJ_T0091913.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37267673 37274639 - Gramd1b protein_coding retained_intron MGP_BALBcJ_T0091914.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37284364 37301140 - Gramd1b protein_coding retained_intron MGP_BALBcJ_T0091915.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37285128 37362629 - Gramd1b protein_coding processed_transcript MGP_BALBcJ_T0091916.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37285130 37362615 - Gramd1b protein_coding processed_transcript MGP_BALBcJ_T0091917.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37301097 37445022 - Gramd1b protein_coding processed_transcript MGP_BALBcJ_T0091918.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37301110 37445012 - Gramd1b protein_coding processed_transcript MGP_BALBcJ_T0091919.1 MGP_BALBcJ_G0034638.1 mouse_genomes_project 9 37301157 37345215 - Gramd1b protein_coding processed_transcript MGP_BALBcJ_T0101507.1 MGP_BALBcJ_G0039543.1 mouse_genomes_project 9 111652088 111652205 - Gm25059 snoRNA snoRNA MGP_BALBcJ_T0094103.1 MGP_BALBcJ_G0035197.1 mouse_genomes_project 9 103800379 103804664 + MGP_BALBcJ_P0094103 Tlr9 protein_coding protein_coding MGP_BALBcJ_T0091131.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4557817 4584082 - MGP_BALBcJ_P0091131 Birc3 protein_coding protein_coding MGP_BALBcJ_T0091132.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4558812 4569406 - MGP_BALBcJ_P0091132 Birc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091133.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4564887 4584041 - MGP_BALBcJ_P0091133 Birc3 protein_coding protein_coding MGP_BALBcJ_T0091134.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4569870 4584228 - MGP_BALBcJ_P0091134 Birc3 protein_coding protein_coding MGP_BALBcJ_T0091135.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4569889 4584244 - MGP_BALBcJ_P0091135 Birc3 protein_coding protein_coding MGP_BALBcJ_T0091136.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4575272 4583915 - Birc3 protein_coding processed_transcript MGP_BALBcJ_T0091137.1 MGP_BALBcJ_G0034302.1 mouse_genomes_project 9 4577727 4583955 - Birc3 protein_coding processed_transcript MGP_BALBcJ_T0100207.1 MGP_BALBcJ_G0038243.1 mouse_genomes_project 9 73318609 73318693 - Gm25300 snRNA snRNA MGP_BALBcJ_T0005449.1 MGP_BALBcJ_G0004609.1 mouse_genomes_project 9 69700442 69751346 - BC065403 antisense antisense MGP_BALBcJ_T0005450.1 MGP_BALBcJ_G0004609.1 mouse_genomes_project 9 69750045 69751268 - BC065403 antisense antisense MGP_BALBcJ_T0100190.1 MGP_BALBcJ_G0038226.1 mouse_genomes_project 9 60367263 60367370 + Gm25064 snRNA snRNA MGP_BALBcJ_T0093856.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98119065 98257809 + MGP_BALBcJ_P0093856 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093857.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165205 98318783 + MGP_BALBcJ_P0093857 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093858.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165205 98485748 + MGP_BALBcJ_P0093858 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093859.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165357 98259390 + Stag1 protein_coding retained_intron MGP_BALBcJ_T0093860.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165370 98232552 + Stag1 protein_coding retained_intron MGP_BALBcJ_T0093861.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165370 98232571 + Stag1 protein_coding retained_intron MGP_BALBcJ_T0093862.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165370 98485747 + MGP_BALBcJ_P0093862 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093863.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165373 98390319 + MGP_BALBcJ_P0093863 Stag1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093864.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165393 98484601 + MGP_BALBcJ_P0093864 Stag1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093865.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165525 98484608 + MGP_BALBcJ_P0093865 Stag1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093866.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98165527 98298802 + MGP_BALBcJ_P0093866 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093867.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98318695 98484618 + Stag1 protein_coding processed_transcript MGP_BALBcJ_T0093868.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98358740 98372093 + Stag1 protein_coding retained_intron MGP_BALBcJ_T0093869.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98367961 98484036 + MGP_BALBcJ_P0093869 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093870.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98371069 98378718 + Stag1 protein_coding retained_intron MGP_BALBcJ_T0093871.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98412506 98478858 + MGP_BALBcJ_P0093871 Stag1 protein_coding protein_coding MGP_BALBcJ_T0093872.1 MGP_BALBcJ_G0035153.1 mouse_genomes_project 9 98482970 98486578 + Stag1 protein_coding retained_intron MGP_BALBcJ_T0093302.1 MGP_BALBcJ_G0035026.1 mouse_genomes_project 9 75036177 75063318 + MGP_BALBcJ_P0093302 Klhl31 protein_coding protein_coding MGP_BALBcJ_T0016024.1 MGP_BALBcJ_G0014121.1 mouse_genomes_project 9 63106106 63106623 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016043.1 MGP_BALBcJ_G0014140.1 mouse_genomes_project 9 72468735 72469958 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093933.1 MGP_BALBcJ_G0035166.1 mouse_genomes_project 9 100661167 100713142 + Rab6b protein_coding processed_transcript MGP_BALBcJ_T0093934.1 MGP_BALBcJ_G0035166.1 mouse_genomes_project 9 100661187 100735818 + MGP_BALBcJ_P0093934 Rab6b protein_coding protein_coding MGP_BALBcJ_T0093692.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93424496 93523062 + MGP_BALBcJ_P0093692 Xrn1 protein_coding protein_coding MGP_BALBcJ_T0093693.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93424503 93527787 + MGP_BALBcJ_P0093693 Xrn1 protein_coding protein_coding MGP_BALBcJ_T0093694.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93424529 93437505 + MGP_BALBcJ_P0093694 Xrn1 protein_coding protein_coding MGP_BALBcJ_T0093695.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93424568 93470996 + Xrn1 protein_coding retained_intron MGP_BALBcJ_T0093696.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93424595 93523062 + Xrn1 protein_coding retained_intron MGP_BALBcJ_T0093697.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93424598 93482403 + MGP_BALBcJ_P0093697 Xrn1 protein_coding protein_coding MGP_BALBcJ_T0093698.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93441780 93445395 + Xrn1 protein_coding retained_intron MGP_BALBcJ_T0093699.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93443552 93448938 + Xrn1 protein_coding retained_intron MGP_BALBcJ_T0093700.1 MGP_BALBcJ_G0035114.1 mouse_genomes_project 9 93487993 93491039 + Xrn1 protein_coding retained_intron MGP_BALBcJ_T0095315.1 MGP_BALBcJ_G0035434.1 mouse_genomes_project 9 120101934 120116286 - MGP_BALBcJ_P0095315 Pomgnt2 protein_coding protein_coding MGP_BALBcJ_T0095201.1 MGP_BALBcJ_G0035395.1 mouse_genomes_project 9 117454316 117490426 + MGP_BALBcJ_P0095201 Xylb protein_coding protein_coding MGP_BALBcJ_T0009184.1 MGP_BALBcJ_G0007376.1 mouse_genomes_project 9 9881603 9882006 - Gm29176 lincRNA lincRNA MGP_BALBcJ_T0092157.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43006768 43024028 - MGP_BALBcJ_P0092157 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092158.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43006786 43023758 - MGP_BALBcJ_P0092158 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092159.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43008216 43010208 - MGP_BALBcJ_P0092159 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092160.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43011145 43013411 - Sidt2 protein_coding retained_intron MGP_BALBcJ_T0092161.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43011573 43013813 - Sidt2 protein_coding retained_intron MGP_BALBcJ_T0092162.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43012395 43015567 - MGP_BALBcJ_P0092162 Sidt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092163.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43013153 43016571 - Sidt2 protein_coding retained_intron MGP_BALBcJ_T0092164.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43013982 43017035 - MGP_BALBcJ_P0092164 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092165.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43014070 43023962 - MGP_BALBcJ_P0092165 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092166.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43014132 43020612 - MGP_BALBcJ_P0092166 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092167.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43014448 43020553 - MGP_BALBcJ_P0092167 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092168.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43014485 43020785 - MGP_BALBcJ_P0092168 Sidt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092169.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43014520 43017087 - MGP_BALBcJ_P0092169 Sidt2 protein_coding protein_coding MGP_BALBcJ_T0092170.1 MGP_BALBcJ_G0034717.1 mouse_genomes_project 9 43021221 43024015 - Sidt2 protein_coding retained_intron MGP_BALBcJ_T0002408.1 MGP_BALBcJ_G0002317.1 mouse_genomes_project 9 88810157 88811049 - TEC TEC MGP_BALBcJ_T0093618.1 MGP_BALBcJ_G0035097.1 mouse_genomes_project 9 88788667 88796133 - MGP_BALBcJ_P0093618 Zic1 protein_coding protein_coding MGP_BALBcJ_T0093619.1 MGP_BALBcJ_G0035097.1 mouse_genomes_project 9 88791109 88795946 - MGP_BALBcJ_P0093619 Zic1 protein_coding protein_coding MGP_BALBcJ_T0093620.1 MGP_BALBcJ_G0035097.1 mouse_genomes_project 9 88792188 88793655 - Zic1 protein_coding processed_transcript MGP_BALBcJ_T0009210.1 MGP_BALBcJ_G0007400.1 mouse_genomes_project 9 40471107 40472003 + Gm28215 lincRNA lincRNA MGP_BALBcJ_T0093574.1 MGP_BALBcJ_G0035088.1 mouse_genomes_project 9 87019814 87056633 - MGP_BALBcJ_P0093574 AF529169 protein_coding protein_coding MGP_BALBcJ_T0093575.1 MGP_BALBcJ_G0035088.1 mouse_genomes_project 9 87023671 87036931 - MGP_BALBcJ_P0093575 AF529169 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011036.1 MGP_BALBcJ_G0009161.1 mouse_genomes_project 9 39435457 39435526 + Gm44311 miRNA miRNA MGP_BALBcJ_T0101457.1 MGP_BALBcJ_G0039493.1 mouse_genomes_project 9 34046373 34046488 - Gm25273 snoRNA snoRNA MGP_BALBcJ_T0091297.1 MGP_BALBcJ_G0034364.1 mouse_genomes_project 9 16171343 16172282 + MGP_BALBcJ_P0091297 Olfr849 protein_coding protein_coding MGP_BALBcJ_T0092532.1 MGP_BALBcJ_G0034835.1 mouse_genomes_project 9 54398427 54411525 + MGP_BALBcJ_P0092532 Trcg1 protein_coding protein_coding MGP_BALBcJ_T0009257.1 MGP_BALBcJ_G0007438.1 mouse_genomes_project 9 77540193 77543877 - Gm17477 lincRNA lincRNA MGP_BALBcJ_T0091920.1 MGP_BALBcJ_G0034639.1 mouse_genomes_project 9 37649065 37649467 + MGP_BALBcJ_P0091920 Gm21915 protein_coding protein_coding MGP_BALBcJ_T0093309.1 MGP_BALBcJ_G0035030.1 mouse_genomes_project 9 75488863 75515855 - MGP_BALBcJ_P0093309 Fbxo9 protein_coding protein_coding MGP_BALBcJ_T0093310.1 MGP_BALBcJ_G0035030.1 mouse_genomes_project 9 75488866 75516264 - MGP_BALBcJ_P0093310 Fbxo9 protein_coding protein_coding MGP_BALBcJ_T0093311.1 MGP_BALBcJ_G0035030.1 mouse_genomes_project 9 75489205 75491975 - Fbxo9 protein_coding retained_intron MGP_BALBcJ_T0093312.1 MGP_BALBcJ_G0035030.1 mouse_genomes_project 9 75492941 75494880 - Fbxo9 protein_coding retained_intron MGP_BALBcJ_T0093313.1 MGP_BALBcJ_G0035030.1 mouse_genomes_project 9 75502733 75515803 - MGP_BALBcJ_P0093313 Fbxo9 protein_coding protein_coding MGP_BALBcJ_T0093314.1 MGP_BALBcJ_G0035030.1 mouse_genomes_project 9 75506990 75515786 - MGP_BALBcJ_P0093314 Fbxo9 protein_coding protein_coding MGP_BALBcJ_T0005459.1 MGP_BALBcJ_G0004617.1 mouse_genomes_project 9 77104561 77106693 + 4930562D21Rik antisense antisense MGP_BALBcJ_T0094986.1 MGP_BALBcJ_G0035342.1 mouse_genomes_project 9 108779216 108795614 + MGP_BALBcJ_P0094986 Lrrc2 protein_coding protein_coding MGP_BALBcJ_T0094987.1 MGP_BALBcJ_G0035342.1 mouse_genomes_project 9 108779240 108801223 + MGP_BALBcJ_P0094987 Lrrc2 protein_coding protein_coding MGP_BALBcJ_T0094988.1 MGP_BALBcJ_G0035342.1 mouse_genomes_project 9 108786303 108798955 + MGP_BALBcJ_P0094988 Lrrc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091771.1 MGP_BALBcJ_G0034534.1 mouse_genomes_project 9 34299887 34303074 - Robo3 protein_coding retained_intron MGP_BALBcJ_T0091772.1 MGP_BALBcJ_G0034534.1 mouse_genomes_project 9 34300263 34306811 - Robo3 protein_coding retained_intron MGP_BALBcJ_T0091773.1 MGP_BALBcJ_G0034534.1 mouse_genomes_project 9 34300263 34317641 - MGP_BALBcJ_P0091773 Robo3 protein_coding protein_coding MGP_BALBcJ_T0091774.1 MGP_BALBcJ_G0034534.1 mouse_genomes_project 9 34300263 34314342 - MGP_BALBcJ_P0091774 Robo3 protein_coding protein_coding MGP_BALBcJ_T0091775.1 MGP_BALBcJ_G0034534.1 mouse_genomes_project 9 34300380 34314342 - Robo3 protein_coding retained_intron MGP_BALBcJ_T0091776.1 MGP_BALBcJ_G0034534.1 mouse_genomes_project 9 34301621 34303001 - Robo3 protein_coding retained_intron MGP_BALBcJ_T0005410.1 MGP_BALBcJ_G0004585.1 mouse_genomes_project 9 39467110 39498352 + Gm16322 antisense antisense MGP_BALBcJ_T0005411.1 MGP_BALBcJ_G0004585.1 mouse_genomes_project 9 39468129 39495101 + Gm16322 antisense antisense MGP_BALBcJ_T0093923.1 MGP_BALBcJ_G0035164.1 mouse_genomes_project 9 100377653 100450814 + MGP_BALBcJ_P0093923 Ryk protein_coding protein_coding MGP_BALBcJ_T0093924.1 MGP_BALBcJ_G0035164.1 mouse_genomes_project 9 100377708 100451225 + MGP_BALBcJ_P0093924 Ryk protein_coding protein_coding MGP_BALBcJ_T0093925.1 MGP_BALBcJ_G0035164.1 mouse_genomes_project 9 100377718 100451577 + MGP_BALBcJ_P0093925 Ryk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093926.1 MGP_BALBcJ_G0035164.1 mouse_genomes_project 9 100388943 100404932 + Ryk protein_coding processed_transcript MGP_BALBcJ_T0093927.1 MGP_BALBcJ_G0035164.1 mouse_genomes_project 9 100412485 100424875 + Ryk protein_coding retained_intron MGP_BALBcJ_T0093928.1 MGP_BALBcJ_G0035164.1 mouse_genomes_project 9 100441840 100442831 + Ryk protein_coding retained_intron MGP_BALBcJ_T0092391.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51470669 51613425 - MGP_BALBcJ_P0092391 Dmxl2 protein_coding protein_coding MGP_BALBcJ_T0092392.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51470675 51487484 - Dmxl2 protein_coding retained_intron MGP_BALBcJ_T0092393.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51470771 51550856 - MGP_BALBcJ_P0092393 Dmxl2 protein_coding protein_coding MGP_BALBcJ_T0092394.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51471622 51613295 - MGP_BALBcJ_P0092394 Dmxl2 protein_coding protein_coding MGP_BALBcJ_T0092395.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51521146 51582309 - MGP_BALBcJ_P0092395 Dmxl2 protein_coding protein_coding MGP_BALBcJ_T0092396.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51528832 51613370 - Dmxl2 protein_coding retained_intron MGP_BALBcJ_T0092397.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51550766 51552437 - Dmxl2 protein_coding processed_transcript MGP_BALBcJ_T0092398.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51580821 51613425 - Dmxl2 protein_coding retained_intron MGP_BALBcJ_T0092399.1 MGP_BALBcJ_G0034796.1 mouse_genomes_project 9 51581995 51613559 - MGP_BALBcJ_P0092399 Dmxl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091565.1 MGP_BALBcJ_G0034476.1 mouse_genomes_project 9 23900423 23958497 - MGP_BALBcJ_P0091565 Jam3 protein_coding protein_coding MGP_BALBcJ_T0091566.1 MGP_BALBcJ_G0034476.1 mouse_genomes_project 9 23903706 23958494 - MGP_BALBcJ_P0091566 Jam3 protein_coding protein_coding MGP_BALBcJ_T0091921.1 MGP_BALBcJ_G0034640.1 mouse_genomes_project 9 37664453 37741330 + Clmp protein_coding processed_transcript MGP_BALBcJ_T0091922.1 MGP_BALBcJ_G0034640.1 mouse_genomes_project 9 37664504 37766357 + MGP_BALBcJ_P0091922 Clmp protein_coding protein_coding MGP_BALBcJ_T0091923.1 MGP_BALBcJ_G0034640.1 mouse_genomes_project 9 37664527 37741453 + Clmp protein_coding retained_intron MGP_BALBcJ_T0091924.1 MGP_BALBcJ_G0034640.1 mouse_genomes_project 9 37755539 37763514 + Clmp protein_coding processed_transcript MGP_BALBcJ_T0005541.1 MGP_BALBcJ_G0004675.1 mouse_genomes_project 9 121770857 121772795 + Gm17120 antisense antisense MGP_BALBcJ_T0095398.1 MGP_BALBcJ_G0035460.1 mouse_genomes_project 9 121925529 121988006 - MGP_BALBcJ_P0095398 Fyco1 protein_coding protein_coding MGP_BALBcJ_T0095399.1 MGP_BALBcJ_G0035460.1 mouse_genomes_project 9 121925905 121987673 - MGP_BALBcJ_P0095399 Fyco1 protein_coding protein_coding MGP_BALBcJ_T0095401.1 MGP_BALBcJ_G0035460.1 mouse_genomes_project 9 121966056 121987988 - MGP_BALBcJ_P0095401 Fyco1 protein_coding protein_coding MGP_BALBcJ_T0095402.1 MGP_BALBcJ_G0035460.1 mouse_genomes_project 9 121974288 121987993 - Fyco1 protein_coding retained_intron MGP_BALBcJ_T0100220.1 MGP_BALBcJ_G0038256.1 mouse_genomes_project 9 101083001 101083104 - Gm26360 snRNA snRNA MGP_BALBcJ_T0098671.1 MGP_BALBcJ_G0036725.1 mouse_genomes_project 9 57243913 57244024 - Gm23668 rRNA rRNA MGP_BALBcJ_T0018492.1 MGP_BALBcJ_G0015677.1 mouse_genomes_project 9 57158756 57163398 - Gm15507 processed_transcript processed_transcript MGP_BALBcJ_T0018493.1 MGP_BALBcJ_G0015677.1 mouse_genomes_project 9 57158958 57163398 - Gm15507 processed_transcript processed_transcript MGP_BALBcJ_T0018494.1 MGP_BALBcJ_G0015677.1 mouse_genomes_project 9 57161841 57163428 - Gm15507 processed_transcript processed_transcript MGP_BALBcJ_T0016012.1 MGP_BALBcJ_G0014109.1 mouse_genomes_project 9 42903360 42904903 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002468.1 MGP_BALBcJ_G0002377.1 mouse_genomes_project 9 116470768 116471606 - TEC TEC MGP_BALBcJ_T0094512.1 MGP_BALBcJ_G0035260.1 mouse_genomes_project 9 105698299 105793420 - MGP_BALBcJ_P0094512 Bsn protein_coding protein_coding MGP_BALBcJ_T0094513.1 MGP_BALBcJ_G0035260.1 mouse_genomes_project 9 105698300 105712701 - MGP_BALBcJ_P0094513 Bsn protein_coding protein_coding MGP_BALBcJ_T0095384.1 MGP_BALBcJ_G0035458.1 mouse_genomes_project 9 121820420 121916433 + MGP_BALBcJ_P0095384 Ccr9 protein_coding protein_coding MGP_BALBcJ_T0095394.1 MGP_BALBcJ_G0035458.1 mouse_genomes_project 9 121901345 121916431 + MGP_BALBcJ_P0095394 Ccr9 protein_coding protein_coding MGP_BALBcJ_T0095395.1 MGP_BALBcJ_G0035458.1 mouse_genomes_project 9 121901361 121915994 + MGP_BALBcJ_P0095395 Ccr9 protein_coding protein_coding MGP_BALBcJ_T0095396.1 MGP_BALBcJ_G0035458.1 mouse_genomes_project 9 121901363 121916439 + MGP_BALBcJ_P0095396 Ccr9 protein_coding protein_coding MGP_BALBcJ_T0095397.1 MGP_BALBcJ_G0035458.1 mouse_genomes_project 9 121909003 121917925 + MGP_BALBcJ_P0095397 Ccr9 protein_coding protein_coding MGP_BALBcJ_T0002383.1 MGP_BALBcJ_G0002293.1 mouse_genomes_project 9 74134806 74138077 + TEC TEC MGP_BALBcJ_T0092404.1 MGP_BALBcJ_G0034800.1 mouse_genomes_project 9 51717307 51774867 - MGP_BALBcJ_P0092404 Acsbg1 protein_coding protein_coding MGP_BALBcJ_T0092405.1 MGP_BALBcJ_G0034800.1 mouse_genomes_project 9 51740869 51755839 - MGP_BALBcJ_P0092405 Acsbg1 protein_coding protein_coding MGP_BALBcJ_T0092406.1 MGP_BALBcJ_G0034800.1 mouse_genomes_project 9 51740895 51760027 - MGP_BALBcJ_P0092406 Acsbg1 protein_coding protein_coding MGP_BALBcJ_T0092407.1 MGP_BALBcJ_G0034800.1 mouse_genomes_project 9 51740915 51774692 - MGP_BALBcJ_P0092407 Acsbg1 protein_coding protein_coding MGP_BALBcJ_T0092408.1 MGP_BALBcJ_G0034800.1 mouse_genomes_project 9 51758863 51759898 - Acsbg1 protein_coding retained_intron MGP_BALBcJ_T0091314.1 MGP_BALBcJ_G0034381.1 mouse_genomes_project 9 16943453 16944485 - MGP_BALBcJ_P0091314 protein_coding protein_coding MGP_BALBcJ_T0093774.1 MGP_BALBcJ_G0035129.1 mouse_genomes_project 9 95962255 95985903 + MGP_BALBcJ_P0093774 Rbp2 protein_coding protein_coding MGP_BALBcJ_T0093775.1 MGP_BALBcJ_G0035129.1 mouse_genomes_project 9 95962306 95985772 + MGP_BALBcJ_P0093775 Rbp2 protein_coding protein_coding MGP_BALBcJ_T0093776.1 MGP_BALBcJ_G0035129.1 mouse_genomes_project 9 95966748 95985893 + MGP_BALBcJ_P0093776 Rbp2 protein_coding protein_coding MGP_BALBcJ_T0093777.1 MGP_BALBcJ_G0035129.1 mouse_genomes_project 9 95967908 95975097 + Rbp2 protein_coding processed_transcript MGP_BALBcJ_T0092422.1 MGP_BALBcJ_G0034806.1 mouse_genomes_project 9 52068886 52069664 - MGP_BALBcJ_P0092422 AY074887 protein_coding protein_coding MGP_BALBcJ_T0092528.1 MGP_BALBcJ_G0034833.1 mouse_genomes_project 9 54302161 54307489 - MGP_BALBcJ_P0092528 Neil1 protein_coding protein_coding MGP_BALBcJ_T0092529.1 MGP_BALBcJ_G0034833.1 mouse_genomes_project 9 54302431 54307667 - MGP_BALBcJ_P0092529 Neil1 protein_coding protein_coding MGP_BALBcJ_T0092530.1 MGP_BALBcJ_G0034833.1 mouse_genomes_project 9 54302617 54306396 - MGP_BALBcJ_P0092530 Neil1 protein_coding protein_coding MGP_BALBcJ_T0093509.1 MGP_BALBcJ_G0035070.1 mouse_genomes_project 9 84448766 84453146 + MGP_BALBcJ_P0093509 Ripply2 protein_coding protein_coding MGP_BALBcJ_T0093510.1 MGP_BALBcJ_G0035070.1 mouse_genomes_project 9 84448865 84453145 + MGP_BALBcJ_P0093510 Ripply2 protein_coding protein_coding MGP_BALBcJ_T0094177.1 MGP_BALBcJ_G0035211.1 mouse_genomes_project 9 104091261 104092701 + MGP_BALBcJ_P0094177 Iqcf5 protein_coding protein_coding MGP_BALBcJ_T0002418.1 MGP_BALBcJ_G0002327.1 mouse_genomes_project 9 96735719 96737474 - TEC TEC MGP_BALBcJ_T0092368.1 MGP_BALBcJ_G0034785.1 mouse_genomes_project 9 50658612 50696411 + MGP_BALBcJ_P0092368 Npat protein_coding protein_coding MGP_BALBcJ_T0092369.1 MGP_BALBcJ_G0034785.1 mouse_genomes_project 9 50658717 50696246 + MGP_BALBcJ_P0092369 Npat protein_coding unknown_likely_coding MGP_BALBcJ_T0092370.1 MGP_BALBcJ_G0034785.1 mouse_genomes_project 9 50685629 50689306 + Npat protein_coding retained_intron MGP_BALBcJ_T0095380.1 MGP_BALBcJ_G0035457.1 mouse_genomes_project 9 121771587 121820788 - MGP_BALBcJ_P0095380 Slc6a20a protein_coding unknown_likely_coding MGP_BALBcJ_T0095381.1 MGP_BALBcJ_G0035457.1 mouse_genomes_project 9 121771591 121820867 - MGP_BALBcJ_P0095381 Slc6a20a protein_coding protein_coding MGP_BALBcJ_T0095382.1 MGP_BALBcJ_G0035457.1 mouse_genomes_project 9 121772465 121820788 - MGP_BALBcJ_P0095382 Slc6a20a protein_coding protein_coding MGP_BALBcJ_T0095383.1 MGP_BALBcJ_G0035457.1 mouse_genomes_project 9 121795024 121820764 - MGP_BALBcJ_P0095383 Slc6a20a protein_coding protein_coding MGP_BALBcJ_T0091895.1 MGP_BALBcJ_G0034631.1 mouse_genomes_project 9 37060109 37061651 - MGP_BALBcJ_P0091895 Olfr983 protein_coding protein_coding MGP_BALBcJ_T0093349.1 MGP_BALBcJ_G0035042.1 mouse_genomes_project 9 76056315 76158196 + MGP_BALBcJ_P0093349 Cd109 protein_coding protein_coding MGP_BALBcJ_T0093350.1 MGP_BALBcJ_G0035042.1 mouse_genomes_project 9 76056532 76058861 + Cd109 protein_coding processed_transcript MGP_BALBcJ_T0094676.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106401568 106415774 + MGP_BALBcJ_P0094676 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094677.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106401568 106424335 + MGP_BALBcJ_P0094677 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094678.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106401594 106416619 + Ip6k2 protein_coding retained_intron MGP_BALBcJ_T0094679.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106401637 106414762 + Ip6k2 protein_coding retained_intron MGP_BALBcJ_T0094680.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106401637 106415476 + MGP_BALBcJ_P0094680 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094681.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106401637 106415129 + MGP_BALBcJ_P0094681 Ip6k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094682.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106413778 106424340 + MGP_BALBcJ_P0094682 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094683.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106413778 106417054 + MGP_BALBcJ_P0094683 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094684.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106413848 106415226 + MGP_BALBcJ_P0094684 Ip6k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094685.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106413915 106415779 + MGP_BALBcJ_P0094685 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094686.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106414136 106415477 + MGP_BALBcJ_P0094686 Ip6k2 protein_coding protein_coding MGP_BALBcJ_T0094687.1 MGP_BALBcJ_G0035285.1 mouse_genomes_project 9 106415971 106417157 + Ip6k2 protein_coding retained_intron MGP_BALBcJ_T0095316.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120237288 120257868 + MGP_BALBcJ_P0095316 Snrk protein_coding protein_coding MGP_BALBcJ_T0095317.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120237309 120290436 + MGP_BALBcJ_P0095317 Snrk protein_coding protein_coding MGP_BALBcJ_T0095318.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120237315 120257976 + MGP_BALBcJ_P0095318 Snrk protein_coding protein_coding MGP_BALBcJ_T0095319.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120237352 120286207 + MGP_BALBcJ_P0095319 Snrk protein_coding protein_coding MGP_BALBcJ_T0095320.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120237364 120257823 + MGP_BALBcJ_P0095320 Snrk protein_coding protein_coding MGP_BALBcJ_T0095321.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120237757 120257668 + Snrk protein_coding processed_transcript MGP_BALBcJ_T0095322.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120281044 120286209 + Snrk protein_coding retained_intron MGP_BALBcJ_T0095323.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120283686 120286308 + Snrk protein_coding retained_intron MGP_BALBcJ_T0095324.1 MGP_BALBcJ_G0035435.1 mouse_genomes_project 9 120286561 120288004 + Snrk protein_coding processed_transcript MGP_BALBcJ_T0005525.1 MGP_BALBcJ_G0004663.1 mouse_genomes_project 9 107783567 107786435 - Gm43732 antisense antisense MGP_BALBcJ_T0092888.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63096897 63153667 - MGP_BALBcJ_P0092888 Trip4 protein_coding protein_coding MGP_BALBcJ_T0092889.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63106949 63123247 - Trip4 protein_coding retained_intron MGP_BALBcJ_T0092890.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63149685 63178041 - MGP_BALBcJ_P0092890 Trip4 protein_coding protein_coding MGP_BALBcJ_T0092894.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63163632 63177974 - Trip4 protein_coding processed_transcript MGP_BALBcJ_T0092895.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63163970 63178041 - Trip4 protein_coding processed_transcript MGP_BALBcJ_T0092896.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63164436 63178049 - Trip4 protein_coding processed_transcript MGP_BALBcJ_T0092897.1 MGP_BALBcJ_G0034940.1 mouse_genomes_project 9 63167232 63178041 - Trip4 protein_coding retained_intron MGP_BALBcJ_T0093617.1 MGP_BALBcJ_G0035096.1 mouse_genomes_project 9 88516916 88533968 + MGP_BALBcJ_P0093617 protein_coding protein_coding MGP_BALBcJ_T0093017.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67329989 67349142 + MGP_BALBcJ_P0093017 Bnip2 protein_coding protein_coding MGP_BALBcJ_T0093018.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67330027 67349080 + MGP_BALBcJ_P0093018 Bnip2 protein_coding protein_coding MGP_BALBcJ_T0093019.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67330038 67344833 + MGP_BALBcJ_P0093019 Bnip2 protein_coding protein_coding MGP_BALBcJ_T0093020.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67330040 67339987 + MGP_BALBcJ_P0093020 Bnip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093021.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67335940 67347940 + MGP_BALBcJ_P0093021 Bnip2 protein_coding protein_coding MGP_BALBcJ_T0093022.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67338004 67343065 + Bnip2 protein_coding retained_intron MGP_BALBcJ_T0093023.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67339060 67344463 + Bnip2 protein_coding processed_transcript MGP_BALBcJ_T0093024.1 MGP_BALBcJ_G0034967.1 mouse_genomes_project 9 67344204 67345589 + MGP_BALBcJ_P0093024 Bnip2 protein_coding protein_coding MGP_BALBcJ_T0093653.1 MGP_BALBcJ_G0035106.1 mouse_genomes_project 9 92128245 92683339 + MGP_BALBcJ_P0093653 Slc9a9 protein_coding protein_coding MGP_BALBcJ_T0093654.1 MGP_BALBcJ_G0035106.1 mouse_genomes_project 9 92128268 92178644 + Slc9a9 protein_coding processed_transcript MGP_BALBcJ_T0093655.1 MGP_BALBcJ_G0035106.1 mouse_genomes_project 9 92385867 92683346 + MGP_BALBcJ_P0093655 Slc9a9 protein_coding unknown_likely_coding MGP_BALBcJ_T0093656.1 MGP_BALBcJ_G0035106.1 mouse_genomes_project 9 92571761 92574617 + Slc9a9 protein_coding retained_intron MGP_BALBcJ_T0092184.1 MGP_BALBcJ_G0034722.1 mouse_genomes_project 9 43307952 43310716 + MGP_BALBcJ_P0092184 Apoa4 protein_coding protein_coding MGP_BALBcJ_T0092044.1 MGP_BALBcJ_G0034685.1 mouse_genomes_project 9 41551688 41566023 - MGP_BALBcJ_P0092044 Cxcr5 protein_coding protein_coding MGP_BALBcJ_T0092045.1 MGP_BALBcJ_G0034685.1 mouse_genomes_project 9 41551688 41596040 - MGP_BALBcJ_P0092045 Cxcr5 protein_coding protein_coding MGP_BALBcJ_T0093524.1 MGP_BALBcJ_G0035075.1 mouse_genomes_project 9 85700625 85745406 + MGP_BALBcJ_P0093524 Nt5e protein_coding protein_coding MGP_BALBcJ_T0093525.1 MGP_BALBcJ_G0035075.1 mouse_genomes_project 9 85700986 85704570 + Nt5e protein_coding retained_intron MGP_BALBcJ_T0093526.1 MGP_BALBcJ_G0035075.1 mouse_genomes_project 9 85701001 85741133 + Nt5e protein_coding retained_intron MGP_BALBcJ_T0092657.1 MGP_BALBcJ_G0034876.1 mouse_genomes_project 9 56818068 56851280 + MGP_BALBcJ_P0092657 Parp6 protein_coding protein_coding MGP_BALBcJ_T0016036.1 MGP_BALBcJ_G0014133.1 mouse_genomes_project 9 70181200 70181507 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091150.1 MGP_BALBcJ_G0034306.1 mouse_genomes_project 9 4956412 4975932 + MGP_BALBcJ_P0091150 1700128F08Rik protein_coding protein_coding MGP_BALBcJ_T0005493.1 MGP_BALBcJ_G0004638.1 mouse_genomes_project 9 101024724 101045696 + Gm16252 antisense antisense MGP_BALBcJ_T0018558.1 MGP_BALBcJ_G0015704.1 mouse_genomes_project 9 121820077 121844931 + Gm17200 processed_transcript processed_transcript MGP_BALBcJ_T0091321.1 MGP_BALBcJ_G0034387.1 mouse_genomes_project 9 17195396 17227521 - protein_coding retained_intron MGP_BALBcJ_T0091322.1 MGP_BALBcJ_G0034387.1 mouse_genomes_project 9 17196753 17227557 - MGP_BALBcJ_P0091322 protein_coding unknown_likely_coding MGP_BALBcJ_T0091323.1 MGP_BALBcJ_G0034387.1 mouse_genomes_project 9 17197428 17227553 - protein_coding retained_intron MGP_BALBcJ_T0091324.1 MGP_BALBcJ_G0034387.1 mouse_genomes_project 9 17198665 17201725 - protein_coding processed_transcript MGP_BALBcJ_T0091325.1 MGP_BALBcJ_G0034387.1 mouse_genomes_project 9 17202378 17227726 - protein_coding retained_intron MGP_BALBcJ_T0091326.1 MGP_BALBcJ_G0034387.1 mouse_genomes_project 9 17204667 17227391 - MGP_BALBcJ_P0091326 protein_coding protein_coding MGP_BALBcJ_T0091888.1 MGP_BALBcJ_G0034624.1 mouse_genomes_project 9 36929994 36930927 - MGP_BALBcJ_P0091888 Olfr975 protein_coding protein_coding MGP_BALBcJ_T0101505.1 MGP_BALBcJ_G0039541.1 mouse_genomes_project 9 107916646 107916772 - Gm23377 snoRNA snoRNA MGP_BALBcJ_T0002410.1 MGP_BALBcJ_G0002319.1 mouse_genomes_project 9 89998148 90002217 - TEC TEC MGP_BALBcJ_T0101476.1 MGP_BALBcJ_G0039512.1 mouse_genomes_project 9 63217106 63217238 - Gm22657 snoRNA snoRNA MGP_BALBcJ_T0093245.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72707534 72728047 - Mapk6 protein_coding processed_transcript MGP_BALBcJ_T0093246.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72725429 72748235 - MGP_BALBcJ_P0093246 Mapk6 protein_coding protein_coding MGP_BALBcJ_T0093247.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72725431 72748881 - MGP_BALBcJ_P0093247 Mapk6 protein_coding protein_coding MGP_BALBcJ_T0093248.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72732101 72736620 - Mapk6 protein_coding retained_intron MGP_BALBcJ_T0093249.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72732746 72748872 - Mapk6 protein_coding retained_intron MGP_BALBcJ_T0093250.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72737271 72748459 - Mapk6 protein_coding processed_transcript MGP_BALBcJ_T0093251.1 MGP_BALBcJ_G0035011.1 mouse_genomes_project 9 72737424 72748861 - Mapk6 protein_coding processed_transcript MGP_BALBcJ_T0092193.1 MGP_BALBcJ_G0034725.1 mouse_genomes_project 9 43350547 43361892 + Bud13 protein_coding retained_intron MGP_BALBcJ_T0092194.1 MGP_BALBcJ_G0034725.1 mouse_genomes_project 9 43350547 43366580 + MGP_BALBcJ_P0092194 Bud13 protein_coding protein_coding MGP_BALBcJ_T0092195.1 MGP_BALBcJ_G0034725.1 mouse_genomes_project 9 43355866 43366580 + MGP_BALBcJ_P0092195 Bud13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092196.1 MGP_BALBcJ_G0034725.1 mouse_genomes_project 9 43355888 43358335 + Bud13 protein_coding retained_intron MGP_BALBcJ_T0094970.1 MGP_BALBcJ_G0035338.1 mouse_genomes_project 9 108690371 108704563 - MGP_BALBcJ_P0094970 Tmie protein_coding protein_coding MGP_BALBcJ_T0094971.1 MGP_BALBcJ_G0035338.1 mouse_genomes_project 9 108699884 108703757 - Tmie protein_coding processed_transcript MGP_BALBcJ_T0094972.1 MGP_BALBcJ_G0035338.1 mouse_genomes_project 9 108699932 108700478 - Tmie protein_coding retained_intron MGP_BALBcJ_T0094968.1 MGP_BALBcJ_G0035337.1 mouse_genomes_project 9 108682970 108689550 + MGP_BALBcJ_P0094968 Prss50 protein_coding protein_coding MGP_BALBcJ_T0094969.1 MGP_BALBcJ_G0035337.1 mouse_genomes_project 9 108686280 108689549 + MGP_BALBcJ_P0094969 Prss50 protein_coding protein_coding MGP_BALBcJ_T0092130.1 MGP_BALBcJ_G0034709.1 mouse_genomes_project 9 42431116 42457403 + MGP_BALBcJ_P0092130 Fxyd6 protein_coding protein_coding MGP_BALBcJ_T0018553.1 MGP_BALBcJ_G0015701.1 mouse_genomes_project 9 112301594 112330430 + processed_transcript processed_transcript MGP_BALBcJ_T0018554.1 MGP_BALBcJ_G0015701.1 mouse_genomes_project 9 112301615 112329647 + processed_transcript processed_transcript MGP_BALBcJ_T0018555.1 MGP_BALBcJ_G0015701.1 mouse_genomes_project 9 112301707 112304267 + processed_transcript processed_transcript MGP_BALBcJ_T0091864.1 MGP_BALBcJ_G0034606.1 mouse_genomes_project 9 36483914 36484850 - MGP_BALBcJ_P0091864 Olfr957 protein_coding protein_coding MGP_BALBcJ_T0092758.1 MGP_BALBcJ_G0034899.1 mouse_genomes_project 9 60108629 60212386 - MGP_BALBcJ_P0092758 Pias1 protein_coding protein_coding MGP_BALBcJ_T0092720.1 MGP_BALBcJ_G0034888.1 mouse_genomes_project 9 59127705 59128960 - MGP_BALBcJ_P0092720 Rplp1 protein_coding protein_coding MGP_BALBcJ_T0095040.1 MGP_BALBcJ_G0035351.1 mouse_genomes_project 9 109387452 109521848 - MGP_BALBcJ_P0095040 Stac protein_coding protein_coding MGP_BALBcJ_T0095041.1 MGP_BALBcJ_G0035351.1 mouse_genomes_project 9 109387452 109521725 - MGP_BALBcJ_P0095041 Stac protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095042.1 MGP_BALBcJ_G0035351.1 mouse_genomes_project 9 109464410 109521829 - Stac protein_coding processed_transcript MGP_BALBcJ_T0011044.1 MGP_BALBcJ_G0009169.1 mouse_genomes_project 9 48249071 48249155 - Mir34b miRNA miRNA MGP_BALBcJ_T0091821.1 MGP_BALBcJ_G0034569.1 mouse_genomes_project 9 35381882 35382815 + MGP_BALBcJ_P0091821 Olfr904 protein_coding protein_coding MGP_BALBcJ_T0091687.1 MGP_BALBcJ_G0034505.1 mouse_genomes_project 9 32400956 32422852 - MGP_BALBcJ_P0091687 Ddx25 protein_coding protein_coding MGP_BALBcJ_T0091462.1 MGP_BALBcJ_G0034432.1 mouse_genomes_project 9 18584844 18638633 - MGP_BALBcJ_P0091462 Dock6 protein_coding protein_coding MGP_BALBcJ_T0091464.1 MGP_BALBcJ_G0034432.1 mouse_genomes_project 9 18622896 18638586 - MGP_BALBcJ_P0091464 Dock6 protein_coding unknown_likely_coding MGP_BALBcJ_T0091925.1 MGP_BALBcJ_G0034641.1 mouse_genomes_project 9 37782394 37783236 + protein_coding retained_intron MGP_BALBcJ_T0091822.1 MGP_BALBcJ_G0034570.1 mouse_genomes_project 9 35390590 35391527 + MGP_BALBcJ_P0091822 Olfr905 protein_coding protein_coding MGP_BALBcJ_T0005533.1 MGP_BALBcJ_G0004671.1 mouse_genomes_project 9 116967368 117005027 - Gm2415 antisense antisense MGP_BALBcJ_T0005534.1 MGP_BALBcJ_G0004671.1 mouse_genomes_project 9 116967451 117005037 - Gm2415 antisense antisense MGP_BALBcJ_T0005535.1 MGP_BALBcJ_G0004671.1 mouse_genomes_project 9 116980544 117005026 - Gm2415 antisense antisense MGP_BALBcJ_T0005536.1 MGP_BALBcJ_G0004671.1 mouse_genomes_project 9 117002820 117005223 - Gm2415 antisense antisense MGP_BALBcJ_T0091857.1 MGP_BALBcJ_G0034599.1 mouse_genomes_project 9 36175104 36176040 + MGP_BALBcJ_P0091857 Olfr944 protein_coding protein_coding MGP_BALBcJ_T0094081.1 MGP_BALBcJ_G0035191.1 mouse_genomes_project 9 103430840 103535836 - MGP_BALBcJ_P0094081 Col6a5 protein_coding protein_coding MGP_BALBcJ_T0094082.1 MGP_BALBcJ_G0035191.1 mouse_genomes_project 9 103433378 103535836 - MGP_BALBcJ_P0094082 Col6a5 protein_coding protein_coding MGP_BALBcJ_T0094083.1 MGP_BALBcJ_G0035191.1 mouse_genomes_project 9 103450726 103456821 - Col6a5 protein_coding retained_intron MGP_BALBcJ_T0002461.1 MGP_BALBcJ_G0002370.1 mouse_genomes_project 9 107836509 107838128 + TEC TEC MGP_BALBcJ_T0092649.1 MGP_BALBcJ_G0034873.1 mouse_genomes_project 9 56719868 56726288 - MGP_BALBcJ_P0092649 Tmem202 protein_coding protein_coding MGP_BALBcJ_T0016015.1 MGP_BALBcJ_G0014112.1 mouse_genomes_project 9 47298779 47299782 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092116.1 MGP_BALBcJ_G0034704.1 mouse_genomes_project 9 42198132 42213839 + MGP_BALBcJ_P0092116 Scn4b protein_coding protein_coding MGP_BALBcJ_T0011083.1 MGP_BALBcJ_G0009208.1 mouse_genomes_project 9 108750604 108750681 + Gm24269 miRNA miRNA MGP_BALBcJ_T0002419.1 MGP_BALBcJ_G0002328.1 mouse_genomes_project 9 96795873 96798742 + TEC TEC MGP_BALBcJ_T0002356.1 MGP_BALBcJ_G0002266.1 mouse_genomes_project 9 69175985 69177723 - TEC TEC MGP_BALBcJ_T0009311.1 MGP_BALBcJ_G0007480.1 mouse_genomes_project 9 106566510 106566867 - Gm38004 lincRNA lincRNA MGP_BALBcJ_T0095172.1 MGP_BALBcJ_G0035386.1 mouse_genomes_project 9 117153786 117176013 - MGP_BALBcJ_P0095172 Plcd1 protein_coding protein_coding MGP_BALBcJ_T0092226.1 MGP_BALBcJ_G0034737.1 mouse_genomes_project 9 45757643 45940421 - MGP_BALBcJ_P0092226 Zbtb16 protein_coding unknown_likely_coding MGP_BALBcJ_T0095271.1 MGP_BALBcJ_G0035419.1 mouse_genomes_project 9 119599234 119605065 - MGP_BALBcJ_P0095271 Cck protein_coding protein_coding MGP_BALBcJ_T0091715.1 MGP_BALBcJ_G0034523.1 mouse_genomes_project 9 33547199 33552821 + MGP_BALBcJ_P0091715 Acrv1 protein_coding protein_coding MGP_BALBcJ_T0091716.1 MGP_BALBcJ_G0034523.1 mouse_genomes_project 9 33547233 33551343 + Acrv1 protein_coding retained_intron MGP_BALBcJ_T0092131.1 MGP_BALBcJ_G0034710.1 mouse_genomes_project 9 42464393 42471538 + MGP_BALBcJ_P0092131 Fxyd2 protein_coding protein_coding MGP_BALBcJ_T0092132.1 MGP_BALBcJ_G0034710.1 mouse_genomes_project 9 42467405 42471529 + MGP_BALBcJ_P0092132 Fxyd2 protein_coding unknown_likely_coding MGP_BALBcJ_T0093455.1 MGP_BALBcJ_G0035061.1 mouse_genomes_project 9 83101748 83165248 - MGP_BALBcJ_P0093455 Ibtk protein_coding protein_coding MGP_BALBcJ_T0093456.1 MGP_BALBcJ_G0035061.1 mouse_genomes_project 9 83101930 83165248 - MGP_BALBcJ_P0093456 Ibtk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093457.1 MGP_BALBcJ_G0035061.1 mouse_genomes_project 9 83101945 83135252 - Ibtk protein_coding retained_intron MGP_BALBcJ_T0093458.1 MGP_BALBcJ_G0035061.1 mouse_genomes_project 9 83122598 83132967 - Ibtk protein_coding retained_intron MGP_BALBcJ_T0093459.1 MGP_BALBcJ_G0035061.1 mouse_genomes_project 9 83134611 83165228 - Ibtk protein_coding retained_intron MGP_BALBcJ_T0093460.1 MGP_BALBcJ_G0035061.1 mouse_genomes_project 9 83142721 83145664 - Ibtk protein_coding retained_intron MGP_BALBcJ_T0092022.1 MGP_BALBcJ_G0034671.1 mouse_genomes_project 9 41332698 41345052 - MGP_BALBcJ_P0092022 Hinfp protein_coding protein_coding MGP_BALBcJ_T0092025.1 MGP_BALBcJ_G0034674.1 mouse_genomes_project 9 41376750 41378134 + MGP_BALBcJ_P0092025 H2afx protein_coding protein_coding MGP_BALBcJ_T0091307.1 MGP_BALBcJ_G0034374.1 mouse_genomes_project 9 16600891 16605016 - MGP_BALBcJ_P0091307 Olfr860 protein_coding protein_coding MGP_BALBcJ_T0092129.1 MGP_BALBcJ_G0034708.1 mouse_genomes_project 9 42378303 42407182 + MGP_BALBcJ_P0092129 Tmprss13 protein_coding protein_coding MGP_BALBcJ_T0000339.1 MGP_BALBcJ_G0000280.1 mouse_genomes_project 9 121226928 121226999 + mt-Tn Mt_tRNA Mt_tRNA MGP_BALBcJ_T0091407.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18051565 18066441 - MGP_BALBcJ_P0091407 Kri1 protein_coding protein_coding MGP_BALBcJ_T0091408.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18051744 18066425 - MGP_BALBcJ_P0091408 Kri1 protein_coding protein_coding MGP_BALBcJ_T0091409.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18051976 18053502 - Kri1 protein_coding retained_intron MGP_BALBcJ_T0091410.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18057391 18066441 - Kri1 protein_coding retained_intron MGP_BALBcJ_T0091411.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18059473 18066428 - Kri1 protein_coding retained_intron MGP_BALBcJ_T0091412.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18060433 18066441 - Kri1 protein_coding retained_intron MGP_BALBcJ_T0091413.1 MGP_BALBcJ_G0034416.1 mouse_genomes_project 9 18065996 18066428 - Kri1 protein_coding retained_intron MGP_BALBcJ_T0016056.1 MGP_BALBcJ_G0014153.1 mouse_genomes_project 9 78326161 78327562 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091845.1 MGP_BALBcJ_G0034587.1 mouse_genomes_project 9 35779721 35782526 + MGP_BALBcJ_P0091845 Olfr924 protein_coding protein_coding MGP_BALBcJ_T0093416.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512525 80513403 - Hmgn3 protein_coding processed_transcript MGP_BALBcJ_T0093417.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512525 80550223 - MGP_BALBcJ_P0093417 Hmgn3 protein_coding protein_coding MGP_BALBcJ_T0093418.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512525 80550008 - MGP_BALBcJ_P0093418 Hmgn3 protein_coding protein_coding MGP_BALBcJ_T0093419.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512525 80550068 - MGP_BALBcJ_P0093419 Hmgn3 protein_coding protein_coding MGP_BALBcJ_T0093420.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512525 80550143 - MGP_BALBcJ_P0093420 Hmgn3 protein_coding protein_coding MGP_BALBcJ_T0093421.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512545 80513709 - Hmgn3 protein_coding retained_intron MGP_BALBcJ_T0093422.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512758 80515147 - Hmgn3 protein_coding retained_intron MGP_BALBcJ_T0093423.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80512955 80550055 - MGP_BALBcJ_P0093423 Hmgn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093424.1 MGP_BALBcJ_G0035054.1 mouse_genomes_project 9 80513297 80513671 - Hmgn3 protein_coding retained_intron MGP_BALBcJ_T0092535.1 MGP_BALBcJ_G0034838.1 mouse_genomes_project 9 54601546 54628948 - MGP_BALBcJ_P0092535 Scamp5 protein_coding unknown_likely_coding MGP_BALBcJ_T0092039.1 MGP_BALBcJ_G0034680.1 mouse_genomes_project 9 41443435 41446142 + MGP_BALBcJ_P0092039 Rps25 protein_coding protein_coding MGP_BALBcJ_T0009242.1 MGP_BALBcJ_G0007424.1 mouse_genomes_project 9 67514801 67543157 - Gm26849 lincRNA lincRNA MGP_BALBcJ_T0100226.1 MGP_BALBcJ_G0038262.1 mouse_genomes_project 9 108896447 108896510 + Gm26409 snRNA snRNA MGP_BALBcJ_T0095407.1 MGP_BALBcJ_G0035466.1 mouse_genomes_project 9 122248032 122259628 + MGP_BALBcJ_P0095407 Ccr2 protein_coding protein_coding MGP_BALBcJ_T0095408.1 MGP_BALBcJ_G0035466.1 mouse_genomes_project 9 122248240 122255211 + MGP_BALBcJ_P0095408 Ccr2 protein_coding protein_coding MGP_BALBcJ_T0095409.1 MGP_BALBcJ_G0035466.1 mouse_genomes_project 9 122248265 122254621 + MGP_BALBcJ_P0095409 Ccr2 protein_coding protein_coding MGP_BALBcJ_T0095410.1 MGP_BALBcJ_G0035466.1 mouse_genomes_project 9 122251696 122255211 + MGP_BALBcJ_P0095410 Ccr2 protein_coding protein_coding MGP_BALBcJ_T0016085.1 MGP_BALBcJ_G0014182.1 mouse_genomes_project 9 90141270 90142084 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100170.1 MGP_BALBcJ_G0038206.1 mouse_genomes_project 9 16981843 16981988 - Gm26290 snRNA snRNA MGP_BALBcJ_T0091485.1 MGP_BALBcJ_G0034444.1 mouse_genomes_project 9 18841362 18857216 - MGP_BALBcJ_P0091485 Zfp653 protein_coding protein_coding MGP_BALBcJ_T0091486.1 MGP_BALBcJ_G0034444.1 mouse_genomes_project 9 18841362 18857216 - MGP_BALBcJ_P0091486 Zfp653 protein_coding protein_coding MGP_BALBcJ_T0095105.1 MGP_BALBcJ_G0035368.1 mouse_genomes_project 9 112658978 112696186 + MGP_BALBcJ_P0095105 Dync1li1 protein_coding protein_coding MGP_BALBcJ_T0016050.1 MGP_BALBcJ_G0014147.1 mouse_genomes_project 9 74488033 74490235 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095195.1 MGP_BALBcJ_G0035394.1 mouse_genomes_project 9 117436032 117439109 + MGP_BALBcJ_P0095195 protein_coding protein_coding MGP_BALBcJ_T0095197.1 MGP_BALBcJ_G0035394.1 mouse_genomes_project 9 117437403 117444191 + MGP_BALBcJ_P0095197 protein_coding protein_coding MGP_BALBcJ_T0095198.1 MGP_BALBcJ_G0035394.1 mouse_genomes_project 9 117437770 117445690 + protein_coding retained_intron MGP_BALBcJ_T0095199.1 MGP_BALBcJ_G0035394.1 mouse_genomes_project 9 117437813 117441065 + protein_coding retained_intron MGP_BALBcJ_T0095200.1 MGP_BALBcJ_G0035394.1 mouse_genomes_project 9 117442453 117445163 + protein_coding retained_intron MGP_BALBcJ_T0094722.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106528925 106560201 + MGP_BALBcJ_P0094722 Col7a1 protein_coding protein_coding MGP_BALBcJ_T0094723.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106529084 106560205 + MGP_BALBcJ_P0094723 Col7a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0094724.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106529084 106560201 + MGP_BALBcJ_P0094724 Col7a1 protein_coding protein_coding MGP_BALBcJ_T0094725.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106529826 106530758 + Col7a1 protein_coding retained_intron MGP_BALBcJ_T0094726.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106542990 106543669 + Col7a1 protein_coding retained_intron MGP_BALBcJ_T0094727.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106545020 106555541 + Col7a1 protein_coding retained_intron MGP_BALBcJ_T0094728.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106550661 106552515 + Col7a1 protein_coding retained_intron MGP_BALBcJ_T0094729.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106557979 106559829 + Col7a1 protein_coding retained_intron MGP_BALBcJ_T0094730.1 MGP_BALBcJ_G0035291.1 mouse_genomes_project 9 106558212 106559242 + Col7a1 protein_coding retained_intron MGP_BALBcJ_T0016034.1 MGP_BALBcJ_G0014131.1 mouse_genomes_project 9 69895023 69895231 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016027.1 MGP_BALBcJ_G0014124.1 mouse_genomes_project 9 69244576 69245285 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100174.1 MGP_BALBcJ_G0038210.1 mouse_genomes_project 9 27156931 27157038 - Gm26435 snRNA snRNA MGP_BALBcJ_T0100228.1 MGP_BALBcJ_G0038264.1 mouse_genomes_project 9 112812627 112812731 + Gm23889 snRNA snRNA MGP_BALBcJ_T0011013.1 MGP_BALBcJ_G0009138.1 mouse_genomes_project 9 1122280 1122364 - Gm23811 miRNA miRNA MGP_BALBcJ_T0095366.1 MGP_BALBcJ_G0035450.1 mouse_genomes_project 9 121274963 121281723 + MGP_BALBcJ_P0095366 Clec3b protein_coding protein_coding MGP_BALBcJ_T0091459.1 MGP_BALBcJ_G0034429.1 mouse_genomes_project 9 18506005 18533075 + MGP_BALBcJ_P0091459 Ldlr protein_coding protein_coding MGP_BALBcJ_T0095233.1 MGP_BALBcJ_G0035410.1 mouse_genomes_project 9 118264066 118283572 + MGP_BALBcJ_P0095233 Mobp protein_coding protein_coding MGP_BALBcJ_T0095234.1 MGP_BALBcJ_G0035410.1 mouse_genomes_project 9 118264066 118290281 + MGP_BALBcJ_P0095234 Mobp protein_coding protein_coding MGP_BALBcJ_T0095235.1 MGP_BALBcJ_G0035410.1 mouse_genomes_project 9 118264066 118295674 + MGP_BALBcJ_P0095235 Mobp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095236.1 MGP_BALBcJ_G0035410.1 mouse_genomes_project 9 118264066 118290281 + MGP_BALBcJ_P0095236 Mobp protein_coding protein_coding MGP_BALBcJ_T0009260.1 MGP_BALBcJ_G0007441.1 mouse_genomes_project 9 79651090 79654291 + 1700063H06Rik lincRNA lincRNA MGP_BALBcJ_T0016008.1 MGP_BALBcJ_G0014105.1 mouse_genomes_project 9 35096151 35097186 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009246.1 MGP_BALBcJ_G0007428.1 mouse_genomes_project 9 70126342 70128522 - Gm27204 lincRNA lincRNA MGP_BALBcJ_T0092383.1 MGP_BALBcJ_G0034789.1 mouse_genomes_project 9 50889183 50937848 + MGP_BALBcJ_P0092383 Slc35f2 protein_coding protein_coding MGP_BALBcJ_T0095181.1 MGP_BALBcJ_G0035388.1 mouse_genomes_project 9 117233740 117243697 - MGP_BALBcJ_P0095181 Acaa1b protein_coding unknown_likely_coding MGP_BALBcJ_T0095182.1 MGP_BALBcJ_G0035388.1 mouse_genomes_project 9 117233740 117243697 - MGP_BALBcJ_P0095182 Acaa1b protein_coding unknown_likely_coding MGP_BALBcJ_T0099030.1 MGP_BALBcJ_G0037071.1 mouse_genomes_project 9 53371520 53372987 - Gm29322 sense_intronic sense_intronic MGP_BALBcJ_T0095101.1 MGP_BALBcJ_G0035364.1 mouse_genomes_project 9 112445862 112451960 - MGP_BALBcJ_P0095101 Ccr4 protein_coding protein_coding MGP_BALBcJ_T0005456.1 MGP_BALBcJ_G0004614.1 mouse_genomes_project 9 73677775 73679045 + Gm27234 antisense antisense MGP_BALBcJ_T0094991.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108838626 108861920 + MGP_BALBcJ_P0094991 Ltf protein_coding protein_coding MGP_BALBcJ_T0094992.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108838647 108864194 + MGP_BALBcJ_P0094992 Ltf protein_coding protein_coding MGP_BALBcJ_T0094993.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108838647 108842148 + MGP_BALBcJ_P0094993 Ltf protein_coding protein_coding MGP_BALBcJ_T0094994.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108838647 108861920 + MGP_BALBcJ_P0094994 Ltf protein_coding protein_coding MGP_BALBcJ_T0094995.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108838665 108844693 + MGP_BALBcJ_P0094995 Ltf protein_coding protein_coding MGP_BALBcJ_T0094996.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108842100 108847101 + MGP_BALBcJ_P0094996 Ltf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094997.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108844070 108845188 + Ltf protein_coding retained_intron MGP_BALBcJ_T0094998.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108846802 108848174 + Ltf protein_coding retained_intron MGP_BALBcJ_T0094999.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108847040 108857231 + MGP_BALBcJ_P0094999 Ltf protein_coding protein_coding MGP_BALBcJ_T0095000.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108851910 108861904 + MGP_BALBcJ_P0095000 Ltf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095001.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108857061 108861904 + Ltf protein_coding retained_intron MGP_BALBcJ_T0095002.1 MGP_BALBcJ_G0035344.1 mouse_genomes_project 9 108860231 108863753 + MGP_BALBcJ_P0095002 Ltf protein_coding protein_coding MGP_BALBcJ_T0092742.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59640713 59754079 - MGP_BALBcJ_P0092742 Coro2b protein_coding protein_coding MGP_BALBcJ_T0092743.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59646785 59649204 - MGP_BALBcJ_P0092743 Coro2b protein_coding protein_coding MGP_BALBcJ_T0092744.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59649138 59727736 - MGP_BALBcJ_P0092744 Coro2b protein_coding protein_coding MGP_BALBcJ_T0092745.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59649465 59650453 - Coro2b protein_coding retained_intron MGP_BALBcJ_T0092746.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59650536 59662858 - MGP_BALBcJ_P0092746 Coro2b protein_coding protein_coding MGP_BALBcJ_T0092747.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59653696 59737536 - MGP_BALBcJ_P0092747 Coro2b protein_coding protein_coding MGP_BALBcJ_T0092748.1 MGP_BALBcJ_G0034894.1 mouse_genomes_project 9 59667450 59753995 - Coro2b protein_coding retained_intron MGP_BALBcJ_T0005416.1 MGP_BALBcJ_G0004589.1 mouse_genomes_project 9 43309877 43310786 - Gm10680 antisense antisense MGP_BALBcJ_T0092613.1 MGP_BALBcJ_G0034861.1 mouse_genomes_project 9 55438648 55448299 + MGP_BALBcJ_P0092613 Stoml1 protein_coding protein_coding MGP_BALBcJ_T0015992.1 MGP_BALBcJ_G0014089.1 mouse_genomes_project 9 11409107 11409635 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092220.1 MGP_BALBcJ_G0034735.1 mouse_genomes_project 9 45596970 45597590 + MGP_BALBcJ_P0092220 Gm5617 protein_coding protein_coding MGP_BALBcJ_T0011086.1 MGP_BALBcJ_G0009211.1 mouse_genomes_project 9 116064789 116064866 + Gm22008 miRNA miRNA MGP_BALBcJ_T0093667.1 MGP_BALBcJ_G0035109.1 mouse_genomes_project 9 93022544 93030909 + MGP_BALBcJ_P0093667 Paqr9 protein_coding protein_coding MGP_BALBcJ_T0100200.1 MGP_BALBcJ_G0038236.1 mouse_genomes_project 9 67865728 67865835 - Gm23730 snRNA snRNA MGP_BALBcJ_T0002346.1 MGP_BALBcJ_G0002256.1 mouse_genomes_project 9 29401709 29403636 - TEC TEC MGP_BALBcJ_T0093466.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83879956 83976919 + MGP_BALBcJ_P0093466 protein_coding protein_coding MGP_BALBcJ_T0093467.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83879972 83930641 + protein_coding retained_intron MGP_BALBcJ_T0093468.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83879972 83951468 + MGP_BALBcJ_P0093468 protein_coding unknown_likely_coding MGP_BALBcJ_T0093469.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83879981 83922361 + protein_coding retained_intron MGP_BALBcJ_T0093470.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83880013 83923485 + protein_coding retained_intron MGP_BALBcJ_T0093471.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83880013 83935381 + MGP_BALBcJ_P0093471 protein_coding protein_coding MGP_BALBcJ_T0093472.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83880016 83976800 + MGP_BALBcJ_P0093472 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093473.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83898097 83976802 + MGP_BALBcJ_P0093473 protein_coding protein_coding MGP_BALBcJ_T0093474.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83899954 83902760 + protein_coding retained_intron MGP_BALBcJ_T0093475.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83902288 83905190 + protein_coding retained_intron MGP_BALBcJ_T0093476.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83916214 83920185 + protein_coding retained_intron MGP_BALBcJ_T0093477.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83922831 83929917 + protein_coding retained_intron MGP_BALBcJ_T0093478.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83923123 83938930 + protein_coding retained_intron MGP_BALBcJ_T0093479.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83943690 83947635 + MGP_BALBcJ_P0093479 protein_coding protein_coding MGP_BALBcJ_T0093480.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83946041 83967494 + protein_coding retained_intron MGP_BALBcJ_T0093481.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83957337 83975621 + protein_coding retained_intron MGP_BALBcJ_T0093482.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83958764 83975626 + MGP_BALBcJ_P0093482 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093483.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83963824 83970121 + protein_coding retained_intron MGP_BALBcJ_T0093484.1 MGP_BALBcJ_G0035064.1 mouse_genomes_project 9 83970620 83975626 + protein_coding retained_intron MGP_BALBcJ_T0094950.1 MGP_BALBcJ_G0035330.1 mouse_genomes_project 9 108531483 108556652 - MGP_BALBcJ_P0094950 Pth1r protein_coding protein_coding MGP_BALBcJ_T0094951.1 MGP_BALBcJ_G0035330.1 mouse_genomes_project 9 108531486 108553216 - MGP_BALBcJ_P0094951 Pth1r protein_coding protein_coding MGP_BALBcJ_T0094952.1 MGP_BALBcJ_G0035330.1 mouse_genomes_project 9 108531540 108552196 - MGP_BALBcJ_P0094952 Pth1r protein_coding protein_coding MGP_BALBcJ_T0094953.1 MGP_BALBcJ_G0035330.1 mouse_genomes_project 9 108536903 108556586 - MGP_BALBcJ_P0094953 Pth1r protein_coding protein_coding MGP_BALBcJ_T0094954.1 MGP_BALBcJ_G0035330.1 mouse_genomes_project 9 108541034 108556675 - MGP_BALBcJ_P0094954 Pth1r protein_coding protein_coding MGP_BALBcJ_T0002362.1 MGP_BALBcJ_G0002272.1 mouse_genomes_project 9 69339450 69341101 - TEC TEC MGP_BALBcJ_T0091934.1 MGP_BALBcJ_G0034645.1 mouse_genomes_project 9 37988851 38137306 - MGP_BALBcJ_P0091934 Ubash3b protein_coding protein_coding MGP_BALBcJ_T0091935.1 MGP_BALBcJ_G0034645.1 mouse_genomes_project 9 38029042 38141028 - Ubash3b protein_coding processed_transcript MGP_BALBcJ_T0091936.1 MGP_BALBcJ_G0034645.1 mouse_genomes_project 9 38029070 38137382 - MGP_BALBcJ_P0091936 Ubash3b protein_coding protein_coding MGP_BALBcJ_T0091937.1 MGP_BALBcJ_G0034645.1 mouse_genomes_project 9 38029128 38141196 - MGP_BALBcJ_P0091937 Ubash3b protein_coding protein_coding MGP_BALBcJ_T0091938.1 MGP_BALBcJ_G0034645.1 mouse_genomes_project 9 38139706 38141205 - Ubash3b protein_coding processed_transcript MGP_BALBcJ_T0091264.1 MGP_BALBcJ_G0034343.1 mouse_genomes_project 9 15011666 15033400 + MGP_BALBcJ_P0091264 Chordc1 protein_coding protein_coding MGP_BALBcJ_T0011049.1 MGP_BALBcJ_G0009174.1 mouse_genomes_project 9 55406608 55406713 + Mir6385 miRNA miRNA MGP_BALBcJ_T0092614.1 MGP_BALBcJ_G0034862.1 mouse_genomes_project 9 55473772 55499308 - MGP_BALBcJ_P0092614 Loxl1 protein_coding protein_coding MGP_BALBcJ_T0095104.1 MGP_BALBcJ_G0035367.1 mouse_genomes_project 9 112542926 112598564 - MGP_BALBcJ_P0095104 Cnot10 protein_coding protein_coding MGP_BALBcJ_T0093789.1 MGP_BALBcJ_G0035135.1 mouse_genomes_project 9 96381228 96382732 + MGP_BALBcJ_P0093789 7420426K07Rik protein_coding protein_coding MGP_BALBcJ_T0092966.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328554 64355196 - MGP_BALBcJ_P0092966 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092967.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328554 64349836 - MGP_BALBcJ_P0092967 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092968.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328554 64355335 - MGP_BALBcJ_P0092968 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092969.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328556 64349731 - MGP_BALBcJ_P0092969 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092970.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328557 64355138 - MGP_BALBcJ_P0092970 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092971.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328557 64349891 - MGP_BALBcJ_P0092971 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092972.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328570 64355130 - MGP_BALBcJ_P0092972 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092973.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328570 64355115 - MGP_BALBcJ_P0092973 Tpm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092974.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328579 64355204 - MGP_BALBcJ_P0092974 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092975.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64328586 64349707 - MGP_BALBcJ_P0092975 Tpm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092976.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64330288 64355101 - MGP_BALBcJ_P0092976 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092977.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64330290 64349638 - MGP_BALBcJ_P0092977 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092978.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64333856 64355193 - MGP_BALBcJ_P0092978 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092979.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64333856 64355142 - MGP_BALBcJ_P0092979 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092980.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64333930 64349770 - MGP_BALBcJ_P0092980 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092981.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64333953 64355072 - MGP_BALBcJ_P0092981 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092982.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64334012 64349662 - MGP_BALBcJ_P0092982 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092983.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64334812 64355191 - MGP_BALBcJ_P0092983 Tpm1 protein_coding protein_coding MGP_BALBcJ_T0092984.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64335884 64338772 - Tpm1 protein_coding processed_transcript MGP_BALBcJ_T0092985.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64338166 64355047 - Tpm1 protein_coding retained_intron MGP_BALBcJ_T0092986.1 MGP_BALBcJ_G0034958.1 mouse_genomes_project 9 64339724 64355120 - Tpm1 protein_coding processed_transcript MGP_BALBcJ_T0092230.1 MGP_BALBcJ_G0034740.1 mouse_genomes_project 9 46090741 46149948 + MGP_BALBcJ_P0092230 Usp28 protein_coding protein_coding MGP_BALBcJ_T0092231.1 MGP_BALBcJ_G0034740.1 mouse_genomes_project 9 46141002 46149945 + MGP_BALBcJ_P0092231 Usp28 protein_coding unknown_likely_coding MGP_BALBcJ_T0093275.1 MGP_BALBcJ_G0035023.1 mouse_genomes_project 9 74337381 74430717 - MGP_BALBcJ_P0093275 Tinag protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093276.1 MGP_BALBcJ_G0035023.1 mouse_genomes_project 9 74337381 74430762 - MGP_BALBcJ_P0093276 Tinag protein_coding protein_coding MGP_BALBcJ_T0093968.1 MGP_BALBcJ_G0035173.1 mouse_genomes_project 9 100975095 101033146 - MGP_BALBcJ_P0093968 Bfsp2 protein_coding protein_coding MGP_BALBcJ_T0093969.1 MGP_BALBcJ_G0035173.1 mouse_genomes_project 9 100975099 100999657 - Bfsp2 protein_coding processed_transcript MGP_BALBcJ_T0009217.1 MGP_BALBcJ_G0007406.1 mouse_genomes_project 9 43988347 44002342 + 2900052N01Rik lincRNA lincRNA MGP_BALBcJ_T0009218.1 MGP_BALBcJ_G0007406.1 mouse_genomes_project 9 43988457 44002342 + 2900052N01Rik lincRNA lincRNA MGP_BALBcJ_T0009219.1 MGP_BALBcJ_G0007406.1 mouse_genomes_project 9 43988481 43997533 + 2900052N01Rik lincRNA lincRNA MGP_BALBcJ_T0015997.1 MGP_BALBcJ_G0014094.1 mouse_genomes_project 9 21935907 21935985 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002450.1 MGP_BALBcJ_G0002359.1 mouse_genomes_project 9 105246752 105247951 + TEC TEC MGP_BALBcJ_T0016076.1 MGP_BALBcJ_G0014173.1 mouse_genomes_project 9 87668177 87668501 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092885.1 MGP_BALBcJ_G0034939.1 mouse_genomes_project 9 62959071 63095540 - MGP_BALBcJ_P0092885 Zfp609 protein_coding protein_coding MGP_BALBcJ_T0092886.1 MGP_BALBcJ_G0034939.1 mouse_genomes_project 9 62966546 62967812 - Zfp609 protein_coding processed_transcript MGP_BALBcJ_T0092887.1 MGP_BALBcJ_G0034939.1 mouse_genomes_project 9 63063015 63065671 - MGP_BALBcJ_P0092887 Zfp609 protein_coding protein_coding MGP_BALBcJ_T0093346.1 MGP_BALBcJ_G0035041.1 mouse_genomes_project 9 75981213 76026422 - MGP_BALBcJ_P0093346 Slc17a5 protein_coding protein_coding MGP_BALBcJ_T0093347.1 MGP_BALBcJ_G0035041.1 mouse_genomes_project 9 75981231 76026396 - MGP_BALBcJ_P0093347 Slc17a5 protein_coding protein_coding MGP_BALBcJ_T0093348.1 MGP_BALBcJ_G0035041.1 mouse_genomes_project 9 76007904 76026408 - MGP_BALBcJ_P0093348 Slc17a5 protein_coding protein_coding MGP_BALBcJ_T0011067.1 MGP_BALBcJ_G0009192.1 mouse_genomes_project 9 99845294 99845346 - Mir7243 miRNA miRNA MGP_BALBcJ_T0093396.1 MGP_BALBcJ_G0035051.1 mouse_genomes_project 9 79260070 79594711 + MGP_BALBcJ_P0093396 Mei4 protein_coding protein_coding MGP_BALBcJ_T0093397.1 MGP_BALBcJ_G0035051.1 mouse_genomes_project 9 79287221 79418311 + MGP_BALBcJ_P0093397 Mei4 protein_coding protein_coding MGP_BALBcJ_T0093131.1 MGP_BALBcJ_G0034987.1 mouse_genomes_project 9 69779622 69790641 + MGP_BALBcJ_P0093131 Mns1 protein_coding protein_coding MGP_BALBcJ_T0093132.1 MGP_BALBcJ_G0034987.1 mouse_genomes_project 9 69780133 69794581 + MGP_BALBcJ_P0093132 Mns1 protein_coding protein_coding MGP_BALBcJ_T0093133.1 MGP_BALBcJ_G0034987.1 mouse_genomes_project 9 69780142 69803862 + MGP_BALBcJ_P0093133 Mns1 protein_coding protein_coding MGP_BALBcJ_T0095422.1 MGP_BALBcJ_G0035469.1 mouse_genomes_project 9 122572921 122578119 + MGP_BALBcJ_P0095422 Nlrp4g protein_coding protein_coding MGP_BALBcJ_T0100183.1 MGP_BALBcJ_G0038219.1 mouse_genomes_project 9 43704891 43704998 - Gm22805 snRNA snRNA MGP_BALBcJ_T0094176.1 MGP_BALBcJ_G0035210.1 mouse_genomes_project 9 104079262 104121790 - Iqcf3 protein_coding processed_transcript MGP_BALBcJ_T0094178.1 MGP_BALBcJ_G0035210.1 mouse_genomes_project 9 104120486 104139330 - MGP_BALBcJ_P0094178 Iqcf3 protein_coding protein_coding MGP_BALBcJ_T0094179.1 MGP_BALBcJ_G0035210.1 mouse_genomes_project 9 104120895 104139328 - MGP_BALBcJ_P0094179 Iqcf3 protein_coding protein_coding MGP_BALBcJ_T0094180.1 MGP_BALBcJ_G0035210.1 mouse_genomes_project 9 104130233 104139298 - MGP_BALBcJ_P0094180 Iqcf3 protein_coding protein_coding MGP_BALBcJ_T0094181.1 MGP_BALBcJ_G0035210.1 mouse_genomes_project 9 104130779 104139298 - MGP_BALBcJ_P0094181 Iqcf3 protein_coding protein_coding MGP_BALBcJ_T0016049.1 MGP_BALBcJ_G0014146.1 mouse_genomes_project 9 74377772 74378010 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094775.1 MGP_BALBcJ_G0035299.1 mouse_genomes_project 9 106656377 106666389 + MGP_BALBcJ_P0094775 Ccdc51 protein_coding protein_coding MGP_BALBcJ_T0091957.1 MGP_BALBcJ_G0034651.1 mouse_genomes_project 9 39961329 40104623 - MGP_BALBcJ_P0091957 Arhgef12 protein_coding protein_coding MGP_BALBcJ_T0091958.1 MGP_BALBcJ_G0034651.1 mouse_genomes_project 9 39961330 40104391 - MGP_BALBcJ_P0091958 Arhgef12 protein_coding protein_coding MGP_BALBcJ_T0002466.1 MGP_BALBcJ_G0002375.1 mouse_genomes_project 9 108874175 108874588 - TEC TEC MGP_BALBcJ_T0094159.1 MGP_BALBcJ_G0035206.1 mouse_genomes_project 9 104045863 104047841 - MGP_BALBcJ_P0094159 Gpr62 protein_coding protein_coding MGP_BALBcJ_T0005481.1 MGP_BALBcJ_G0004628.1 mouse_genomes_project 9 93488464 93489936 - antisense antisense MGP_BALBcJ_T0093890.1 MGP_BALBcJ_G0035158.1 mouse_genomes_project 9 99474411 99479159 + MGP_BALBcJ_P0093890 9630041A04Rik protein_coding protein_coding MGP_BALBcJ_T0015998.1 MGP_BALBcJ_G0014095.1 mouse_genomes_project 9 28108717 28109095 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101494.1 MGP_BALBcJ_G0039530.1 mouse_genomes_project 9 97251677 97251804 - Gm23949 snoRNA snoRNA MGP_BALBcJ_T0011046.1 MGP_BALBcJ_G0009171.1 mouse_genomes_project 9 49257185 49257302 + Mir6244 miRNA miRNA MGP_BALBcJ_T0092847.1 MGP_BALBcJ_G0034925.1 mouse_genomes_project 9 62522701 62538681 + MGP_BALBcJ_P0092847 protein_coding protein_coding MGP_BALBcJ_T0092848.1 MGP_BALBcJ_G0034925.1 mouse_genomes_project 9 62523344 62538611 + MGP_BALBcJ_P0092848 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009297.1 MGP_BALBcJ_G0007469.1 mouse_genomes_project 9 100101369 100111104 + Gm29387 lincRNA lincRNA MGP_BALBcJ_T0091841.1 MGP_BALBcJ_G0034583.1 mouse_genomes_project 9 35687444 35691512 + MGP_BALBcJ_P0091841 Olfr920 protein_coding protein_coding MGP_BALBcJ_T0011062.1 MGP_BALBcJ_G0009187.1 mouse_genomes_project 9 70357369 70357491 + Gm27353 miRNA miRNA MGP_BALBcJ_T0092702.1 MGP_BALBcJ_G0034885.1 mouse_genomes_project 9 57992351 58079468 + MGP_BALBcJ_P0092702 Uaca protein_coding protein_coding MGP_BALBcJ_T0002355.1 MGP_BALBcJ_G0002265.1 mouse_genomes_project 9 55745688 55746719 + TEC TEC MGP_BALBcJ_T0002428.1 MGP_BALBcJ_G0002337.1 mouse_genomes_project 9 98682229 98684113 + TEC TEC MGP_BALBcJ_T0101495.1 MGP_BALBcJ_G0039531.1 mouse_genomes_project 9 97454722 97454856 + Gm23594 snoRNA snoRNA MGP_BALBcJ_T0091962.1 MGP_BALBcJ_G0034654.1 mouse_genomes_project 9 40220419 40238925 - MGP_BALBcJ_P0091962 Oaf protein_coding protein_coding MGP_BALBcJ_T0100224.1 MGP_BALBcJ_G0038260.1 mouse_genomes_project 9 105479288 105479387 + Gm23856 snRNA snRNA MGP_BALBcJ_T0011018.1 MGP_BALBcJ_G0009143.1 mouse_genomes_project 9 10257257 10257355 + Gm22643 miRNA miRNA MGP_BALBcJ_T0009272.1 MGP_BALBcJ_G0007449.1 mouse_genomes_project 9 88270844 88275990 - Gm28703 lincRNA lincRNA MGP_BALBcJ_T0016130.1 MGP_BALBcJ_G0014227.1 mouse_genomes_project 9 115449202 115450585 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092651.1 MGP_BALBcJ_G0034875.1 mouse_genomes_project 9 56778813 56807943 + MGP_BALBcJ_P0092651 Celf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092652.1 MGP_BALBcJ_G0034875.1 mouse_genomes_project 9 56779088 56807943 + MGP_BALBcJ_P0092652 Celf6 protein_coding protein_coding MGP_BALBcJ_T0092653.1 MGP_BALBcJ_G0034875.1 mouse_genomes_project 9 56779088 56807943 + MGP_BALBcJ_P0092653 Celf6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092654.1 MGP_BALBcJ_G0034875.1 mouse_genomes_project 9 56779274 56807948 + MGP_BALBcJ_P0092654 Celf6 protein_coding protein_coding MGP_BALBcJ_T0092655.1 MGP_BALBcJ_G0034875.1 mouse_genomes_project 9 56803322 56804076 + Celf6 protein_coding retained_intron MGP_BALBcJ_T0092656.1 MGP_BALBcJ_G0034875.1 mouse_genomes_project 9 56804697 56806766 + Celf6 protein_coding retained_intron MGP_BALBcJ_T0093047.1 MGP_BALBcJ_G0034973.1 mouse_genomes_project 9 67772978 67819659 - MGP_BALBcJ_P0093047 Rnf111 protein_coding unknown_likely_coding MGP_BALBcJ_T0093048.1 MGP_BALBcJ_G0034973.1 mouse_genomes_project 9 67772985 67847997 - MGP_BALBcJ_P0093048 Rnf111 protein_coding protein_coding MGP_BALBcJ_T0093049.1 MGP_BALBcJ_G0034973.1 mouse_genomes_project 9 67772986 67847627 - MGP_BALBcJ_P0093049 Rnf111 protein_coding protein_coding MGP_BALBcJ_T0101439.1 MGP_BALBcJ_G0039475.1 mouse_genomes_project 9 12001140 12001271 + Gm24455 snoRNA snoRNA MGP_BALBcJ_T0009236.1 MGP_BALBcJ_G0007421.1 mouse_genomes_project 9 65084071 65085568 - M5C1000I18Rik lincRNA lincRNA MGP_BALBcJ_T0009237.1 MGP_BALBcJ_G0007421.1 mouse_genomes_project 9 65084072 65085568 - M5C1000I18Rik lincRNA lincRNA MGP_BALBcJ_T0009238.1 MGP_BALBcJ_G0007421.1 mouse_genomes_project 9 65084072 65085590 - M5C1000I18Rik lincRNA lincRNA MGP_BALBcJ_T0091199.1 MGP_BALBcJ_G0034321.1 mouse_genomes_project 9 11105227 11149552 - MGP_BALBcJ_P0091199 Kdm4d protein_coding protein_coding MGP_BALBcJ_T0095370.1 MGP_BALBcJ_G0035452.1 mouse_genomes_project 9 121384003 121385735 - MGP_BALBcJ_P0095370 Tmem158 protein_coding protein_coding MGP_BALBcJ_T0093634.1 MGP_BALBcJ_G0035100.1 mouse_genomes_project 9 89719800 89742485 + MGP_BALBcJ_P0093634 Plscr1 protein_coding protein_coding MGP_BALBcJ_T0093635.1 MGP_BALBcJ_G0035100.1 mouse_genomes_project 9 89727850 89741654 + MGP_BALBcJ_P0093635 Plscr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0094899.1 MGP_BALBcJ_G0035322.1 mouse_genomes_project 9 108187705 108212990 - MGP_BALBcJ_P0094899 Ptpn23 protein_coding protein_coding MGP_BALBcJ_T0094900.1 MGP_BALBcJ_G0035322.1 mouse_genomes_project 9 108187947 108188871 - MGP_BALBcJ_P0094900 Ptpn23 protein_coding protein_coding MGP_BALBcJ_T0094901.1 MGP_BALBcJ_G0035322.1 mouse_genomes_project 9 108188463 108189273 - Ptpn23 protein_coding retained_intron MGP_BALBcJ_T0094902.1 MGP_BALBcJ_G0035322.1 mouse_genomes_project 9 108191874 108193099 - Ptpn23 protein_coding retained_intron MGP_BALBcJ_T0018490.1 MGP_BALBcJ_G0015676.1 mouse_genomes_project 9 54214798 54230873 - Gm10658 processed_transcript processed_transcript MGP_BALBcJ_T0018491.1 MGP_BALBcJ_G0015676.1 mouse_genomes_project 9 54215371 54231032 - Gm10658 processed_transcript processed_transcript MGP_BALBcJ_T0092494.1 MGP_BALBcJ_G0034829.1 mouse_genomes_project 9 54107807 54140761 + MGP_BALBcJ_P0092494 Snupn protein_coding protein_coding MGP_BALBcJ_T0018557.1 MGP_BALBcJ_G0015703.1 mouse_genomes_project 9 120500990 120519698 - A730085K08Rik processed_transcript processed_transcript MGP_BALBcJ_T0095343.1 MGP_BALBcJ_G0035444.1 mouse_genomes_project 9 121063578 121069519 - MGP_BALBcJ_P0095343 1110059G10Rik protein_coding protein_coding MGP_BALBcJ_T0095344.1 MGP_BALBcJ_G0035444.1 mouse_genomes_project 9 121066024 121069472 - MGP_BALBcJ_P0095344 1110059G10Rik protein_coding protein_coding MGP_BALBcJ_T0092754.1 MGP_BALBcJ_G0034898.1 mouse_genomes_project 9 60081424 60104471 + MGP_BALBcJ_P0092754 Calml4 protein_coding protein_coding MGP_BALBcJ_T0092755.1 MGP_BALBcJ_G0034898.1 mouse_genomes_project 9 60081424 60104471 + MGP_BALBcJ_P0092755 Calml4 protein_coding protein_coding MGP_BALBcJ_T0009304.1 MGP_BALBcJ_G0007475.1 mouse_genomes_project 9 104804630 104807417 + 1700039M15Rik lincRNA lincRNA MGP_BALBcJ_T0016134.1 MGP_BALBcJ_G0014231.1 mouse_genomes_project 9 121432750 121433177 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016114.1 MGP_BALBcJ_G0014211.1 mouse_genomes_project 9 101446572 101446966 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018521.1 MGP_BALBcJ_G0015689.1 mouse_genomes_project 9 85894973 85898249 - processed_transcript lincRNA MGP_BALBcJ_T0018522.1 MGP_BALBcJ_G0015689.1 mouse_genomes_project 9 85894975 85898210 - processed_transcript lincRNA MGP_BALBcJ_T0018523.1 MGP_BALBcJ_G0015689.1 mouse_genomes_project 9 85894980 85897285 - processed_transcript lincRNA MGP_BALBcJ_T0091197.1 MGP_BALBcJ_G0034319.1 mouse_genomes_project 9 10916620 10966453 + MGP_BALBcJ_P0091197 Sesn3 protein_coding protein_coding MGP_BALBcJ_T0091893.1 MGP_BALBcJ_G0034629.1 mouse_genomes_project 9 36998162 36999159 + MGP_BALBcJ_P0091893 Olfr981 protein_coding protein_coding MGP_BALBcJ_T0002469.1 MGP_BALBcJ_G0002378.1 mouse_genomes_project 9 118296752 118297386 + TEC TEC MGP_BALBcJ_T0002465.1 MGP_BALBcJ_G0002374.1 mouse_genomes_project 9 108718292 108721095 - TEC TEC MGP_BALBcJ_T0091546.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23566923 23613287 - MGP_BALBcJ_P0091546 Glb1l2 protein_coding protein_coding MGP_BALBcJ_T0091547.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23566924 23613323 - MGP_BALBcJ_P0091547 Glb1l2 protein_coding protein_coding MGP_BALBcJ_T0091548.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23567647 23613276 - MGP_BALBcJ_P0091548 Glb1l2 protein_coding protein_coding MGP_BALBcJ_T0091549.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23569082 23609440 - MGP_BALBcJ_P0091549 Glb1l2 protein_coding protein_coding MGP_BALBcJ_T0091550.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23571376 23572350 - Glb1l2 protein_coding retained_intron MGP_BALBcJ_T0091551.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23577902 23599074 - Glb1l2 protein_coding retained_intron MGP_BALBcJ_T0091552.1 MGP_BALBcJ_G0034469.1 mouse_genomes_project 9 23587595 23613277 - MGP_BALBcJ_P0091552 Glb1l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0016042.1 MGP_BALBcJ_G0014139.1 mouse_genomes_project 9 72433933 72434476 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094466.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105578487 105650265 + MGP_BALBcJ_P0094466 Ip6k1 protein_coding protein_coding MGP_BALBcJ_T0094467.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105578615 105646342 + MGP_BALBcJ_P0094467 Ip6k1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094468.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105578620 105647194 + Ip6k1 protein_coding processed_transcript MGP_BALBcJ_T0094469.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105578629 105647592 + Ip6k1 protein_coding retained_intron MGP_BALBcJ_T0094470.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105578632 105634671 + MGP_BALBcJ_P0094470 Ip6k1 protein_coding protein_coding MGP_BALBcJ_T0094471.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105578657 105642383 + MGP_BALBcJ_P0094471 Ip6k1 protein_coding protein_coding MGP_BALBcJ_T0094472.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105612699 105647090 + MGP_BALBcJ_P0094472 Ip6k1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094473.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105612731 105629089 + Ip6k1 protein_coding processed_transcript MGP_BALBcJ_T0094474.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105629057 105647626 + MGP_BALBcJ_P0094474 Ip6k1 protein_coding protein_coding MGP_BALBcJ_T0094475.1 MGP_BALBcJ_G0035254.1 mouse_genomes_project 9 105646357 105647022 + MGP_BALBcJ_P0094475 Ip6k1 protein_coding protein_coding MGP_BALBcJ_T0091783.1 MGP_BALBcJ_G0034537.1 mouse_genomes_project 9 34421477 34426408 + MGP_BALBcJ_P0091783 Vsig2 protein_coding protein_coding MGP_BALBcJ_T0092567.1 MGP_BALBcJ_G0034854.1 mouse_genomes_project 9 55115202 55137951 + MGP_BALBcJ_P0092567 Sema7a protein_coding protein_coding MGP_BALBcJ_T0092390.1 MGP_BALBcJ_G0034795.1 mouse_genomes_project 9 51398179 51453663 + MGP_BALBcJ_P0092390 Gldn protein_coding protein_coding MGP_BALBcJ_T0094258.1 MGP_BALBcJ_G0035227.1 mouse_genomes_project 9 105105269 105108128 - MGP_BALBcJ_P0094258 Cyb561d2 protein_coding protein_coding MGP_BALBcJ_T0094259.1 MGP_BALBcJ_G0035227.1 mouse_genomes_project 9 105105837 105108456 - MGP_BALBcJ_P0094259 Cyb561d2 protein_coding protein_coding MGP_BALBcJ_T0094260.1 MGP_BALBcJ_G0035227.1 mouse_genomes_project 9 105105843 105107787 - MGP_BALBcJ_P0094260 Cyb561d2 protein_coding protein_coding MGP_BALBcJ_T0094261.1 MGP_BALBcJ_G0035227.1 mouse_genomes_project 9 105106139 105108387 - Cyb561d2 protein_coding processed_transcript MGP_BALBcJ_T0094262.1 MGP_BALBcJ_G0035227.1 mouse_genomes_project 9 105106304 105108390 - MGP_BALBcJ_P0094262 Cyb561d2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093790.1 MGP_BALBcJ_G0035136.1 mouse_genomes_project 9 96439260 96440501 + MGP_BALBcJ_P0093790 Foxl2 protein_coding protein_coding MGP_BALBcJ_T0011728.1 MGP_BALBcJ_G0009853.1 mouse_genomes_project 9 109069642 109069918 - Gm24860 misc_RNA misc_RNA MGP_BALBcJ_T0091198.1 MGP_BALBcJ_G0034320.1 mouse_genomes_project 9 10994321 11021343 - MGP_BALBcJ_P0091198 Endod1 protein_coding protein_coding MGP_BALBcJ_T0091113.1 MGP_BALBcJ_G0034292.1 mouse_genomes_project 9 4139348 4155036 + MGP_BALBcJ_P0091113 Mmp3 protein_coding protein_coding MGP_BALBcJ_T0094573.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106089101 106089747 + MGP_BALBcJ_P0094573 Lamb2 protein_coding protein_coding MGP_BALBcJ_T0094574.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106089222 106099896 + MGP_BALBcJ_P0094574 Lamb2 protein_coding protein_coding MGP_BALBcJ_T0094575.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106089237 106090019 + MGP_BALBcJ_P0094575 Lamb2 protein_coding protein_coding MGP_BALBcJ_T0094576.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106089243 106089952 + MGP_BALBcJ_P0094576 Lamb2 protein_coding protein_coding MGP_BALBcJ_T0094577.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106089246 106089550 + Lamb2 protein_coding retained_intron MGP_BALBcJ_T0094578.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106097183 106098037 + Lamb2 protein_coding retained_intron MGP_BALBcJ_T0094579.1 MGP_BALBcJ_G0035273.1 mouse_genomes_project 9 106098242 106098898 + Lamb2 protein_coding retained_intron MGP_BALBcJ_T0093988.1 MGP_BALBcJ_G0035178.1 mouse_genomes_project 9 101626654 101628602 + Acad11 protein_coding retained_intron MGP_BALBcJ_T0093989.1 MGP_BALBcJ_G0035178.1 mouse_genomes_project 9 101626693 101693674 + MGP_BALBcJ_P0093989 Acad11 protein_coding protein_coding MGP_BALBcJ_T0093991.1 MGP_BALBcJ_G0035178.1 mouse_genomes_project 9 101656122 101679085 + Acad11 protein_coding processed_transcript MGP_BALBcJ_T0093992.1 MGP_BALBcJ_G0035178.1 mouse_genomes_project 9 101660567 101673601 + MGP_BALBcJ_P0093992 Acad11 protein_coding protein_coding MGP_BALBcJ_T0093995.1 MGP_BALBcJ_G0035178.1 mouse_genomes_project 9 101675958 101679423 + Acad11 protein_coding retained_intron MGP_BALBcJ_T0093996.1 MGP_BALBcJ_G0035178.1 mouse_genomes_project 9 101689858 101693039 + Acad11 protein_coding processed_transcript MGP_BALBcJ_T0100203.1 MGP_BALBcJ_G0038239.1 mouse_genomes_project 9 69589146 69589250 - Gm25163 snRNA snRNA MGP_BALBcJ_T0005486.1 MGP_BALBcJ_G0004632.1 mouse_genomes_project 9 94565053 94568221 + Gm16185 antisense antisense MGP_BALBcJ_T0009195.1 MGP_BALBcJ_G0007387.1 mouse_genomes_project 9 27908747 27910606 - Gm17508 lincRNA lincRNA MGP_BALBcJ_T0002348.1 MGP_BALBcJ_G0002258.1 mouse_genomes_project 9 31308221 31327562 - TEC TEC MGP_BALBcJ_T0009320.1 MGP_BALBcJ_G0007486.1 mouse_genomes_project 9 110084015 110085751 + 2900079G21Rik lincRNA lincRNA MGP_BALBcJ_T0009321.1 MGP_BALBcJ_G0007486.1 mouse_genomes_project 9 110084032 110132866 + 2900079G21Rik lincRNA lincRNA MGP_BALBcJ_T0009322.1 MGP_BALBcJ_G0007486.1 mouse_genomes_project 9 110084119 110085749 + 2900079G21Rik lincRNA lincRNA MGP_BALBcJ_T0009323.1 MGP_BALBcJ_G0007486.1 mouse_genomes_project 9 110107044 110199632 + 2900079G21Rik lincRNA lincRNA MGP_BALBcJ_T0009209.1 MGP_BALBcJ_G0007399.1 mouse_genomes_project 9 38191060 38210257 + lincRNA lincRNA MGP_BALBcJ_T0091846.1 MGP_BALBcJ_G0034588.1 mouse_genomes_project 9 35788501 35789432 + MGP_BALBcJ_P0091846 Olfr26 protein_coding protein_coding MGP_BALBcJ_T0092046.1 MGP_BALBcJ_G0034686.1 mouse_genomes_project 9 41649235 41685368 + MGP_BALBcJ_P0092046 Ddx6 protein_coding unknown_likely_coding MGP_BALBcJ_T0005494.1 MGP_BALBcJ_G0004639.1 mouse_genomes_project 9 101113140 101121932 + 4932413F04Rik antisense antisense MGP_BALBcJ_T0091902.1 MGP_BALBcJ_G0034637.1 mouse_genomes_project 9 37235986 37259273 + MGP_BALBcJ_P0091902 Scn3b protein_coding protein_coding MGP_BALBcJ_T0091903.1 MGP_BALBcJ_G0034637.1 mouse_genomes_project 9 37236114 37246359 + Scn3b protein_coding processed_transcript MGP_BALBcJ_T0091904.1 MGP_BALBcJ_G0034637.1 mouse_genomes_project 9 37236125 37245016 + Scn3b protein_coding retained_intron MGP_BALBcJ_T0091905.1 MGP_BALBcJ_G0034637.1 mouse_genomes_project 9 37236274 37244262 + Scn3b protein_coding retained_intron MGP_BALBcJ_T0091906.1 MGP_BALBcJ_G0034637.1 mouse_genomes_project 9 37236532 37256056 + MGP_BALBcJ_P0091906 Scn3b protein_coding protein_coding MGP_BALBcJ_T0091880.1 MGP_BALBcJ_G0034616.1 mouse_genomes_project 9 36709432 36710371 + MGP_BALBcJ_P0091880 Olfr150 protein_coding protein_coding MGP_BALBcJ_T0091148.1 MGP_BALBcJ_G0034304.1 mouse_genomes_project 9 4742756 4762146 - MGP_BALBcJ_P0091148 9230110C19Rik protein_coding protein_coding MGP_BALBcJ_T0093801.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737235 96757933 + MGP_BALBcJ_P0093801 Cep70 protein_coding protein_coding MGP_BALBcJ_T0093802.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737310 96788693 + MGP_BALBcJ_P0093802 Cep70 protein_coding protein_coding MGP_BALBcJ_T0093803.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737321 96748322 + Cep70 protein_coding retained_intron MGP_BALBcJ_T0093804.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737329 96759099 + MGP_BALBcJ_P0093804 Cep70 protein_coding protein_coding MGP_BALBcJ_T0093805.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737331 96786274 + MGP_BALBcJ_P0093805 Cep70 protein_coding protein_coding MGP_BALBcJ_T0093806.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737350 96756792 + MGP_BALBcJ_P0093806 Cep70 protein_coding protein_coding MGP_BALBcJ_T0093807.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96737394 96765802 + MGP_BALBcJ_P0093807 Cep70 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093808.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96740153 96757237 + Cep70 protein_coding retained_intron MGP_BALBcJ_T0093809.1 MGP_BALBcJ_G0035141.1 mouse_genomes_project 9 96779743 96784640 + Cep70 protein_coding retained_intron MGP_BALBcJ_T0093244.1 MGP_BALBcJ_G0035010.1 mouse_genomes_project 9 72685892 72689765 + MGP_BALBcJ_P0093244 Bcl2l10 protein_coding protein_coding MGP_BALBcJ_T0005523.1 MGP_BALBcJ_G0004661.1 mouse_genomes_project 9 106818882 107120738 + antisense antisense MGP_BALBcJ_T0101484.1 MGP_BALBcJ_G0039520.1 mouse_genomes_project 9 75420867 75420994 - Gm23609 snoRNA snoRNA MGP_BALBcJ_T0095301.1 MGP_BALBcJ_G0035426.1 mouse_genomes_project 9 119891973 119898210 + MGP_BALBcJ_P0095301 Klhl40 protein_coding protein_coding MGP_BALBcJ_T0091965.1 MGP_BALBcJ_G0034656.1 mouse_genomes_project 9 40308456 40333765 + MGP_BALBcJ_P0091965 Trim29 protein_coding protein_coding MGP_BALBcJ_T0016103.1 MGP_BALBcJ_G0014200.1 mouse_genomes_project 9 97457577 97458403 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002452.1 MGP_BALBcJ_G0002361.1 mouse_genomes_project 9 105792033 105792763 - TEC TEC MGP_BALBcJ_T0098674.1 MGP_BALBcJ_G0036728.1 mouse_genomes_project 9 63104292 63104405 + n-R5s85 rRNA rRNA MGP_BALBcJ_T0016126.1 MGP_BALBcJ_G0014223.1 mouse_genomes_project 9 107763996 107765954 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091393.1 MGP_BALBcJ_G0034411.1 mouse_genomes_project 9 17914277 17925643 - MGP_BALBcJ_P0091393 Cdc37 protein_coding protein_coding MGP_BALBcJ_T0091796.1 MGP_BALBcJ_G0034545.1 mouse_genomes_project 9 34705877 34706925 + MGP_BALBcJ_P0091796 Olfr876 protein_coding protein_coding MGP_BALBcJ_T0091472.1 MGP_BALBcJ_G0034436.1 mouse_genomes_project 9 18710351 18718928 + MGP_BALBcJ_P0091472 Ccdc159 protein_coding protein_coding MGP_BALBcJ_T0091473.1 MGP_BALBcJ_G0034436.1 mouse_genomes_project 9 18710351 18718928 + MGP_BALBcJ_P0091473 Ccdc159 protein_coding protein_coding MGP_BALBcJ_T0005538.1 MGP_BALBcJ_G0004673.1 mouse_genomes_project 9 119696458 119713456 + Lyzl4os antisense antisense MGP_BALBcJ_T0005539.1 MGP_BALBcJ_G0004673.1 mouse_genomes_project 9 119696481 119725241 + Lyzl4os antisense antisense MGP_BALBcJ_T0091969.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41091878 41120923 + MGP_BALBcJ_P0091969 Usp2 protein_coding protein_coding MGP_BALBcJ_T0091970.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41091935 41119252 + MGP_BALBcJ_P0091970 Usp2 protein_coding protein_coding MGP_BALBcJ_T0091971.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41094295 41119292 + MGP_BALBcJ_P0091971 Usp2 protein_coding protein_coding MGP_BALBcJ_T0091972.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41097032 41100753 + MGP_BALBcJ_P0091972 Usp2 protein_coding protein_coding MGP_BALBcJ_T0091973.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41110262 41119249 + MGP_BALBcJ_P0091973 Usp2 protein_coding protein_coding MGP_BALBcJ_T0091974.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41110263 41119777 + MGP_BALBcJ_P0091974 Usp2 protein_coding protein_coding MGP_BALBcJ_T0091975.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41112503 41117830 + MGP_BALBcJ_P0091975 Usp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091976.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41117797 41119663 + Usp2 protein_coding processed_transcript MGP_BALBcJ_T0091977.1 MGP_BALBcJ_G0034660.1 mouse_genomes_project 9 41118003 41119256 + Usp2 protein_coding processed_transcript MGP_BALBcJ_T0091892.1 MGP_BALBcJ_G0034628.1 mouse_genomes_project 9 36978617 36981341 - MGP_BALBcJ_P0091892 protein_coding protein_coding MGP_BALBcJ_T0100222.1 MGP_BALBcJ_G0038258.1 mouse_genomes_project 9 104394782 104394887 - Gm22384 snRNA snRNA MGP_BALBcJ_T0091799.1 MGP_BALBcJ_G0034548.1 mouse_genomes_project 9 34824970 34826035 + MGP_BALBcJ_P0091799 Olfr878 protein_coding protein_coding MGP_BALBcJ_T0091564.1 MGP_BALBcJ_G0034475.1 mouse_genomes_project 9 23833645 23897844 + MGP_BALBcJ_P0091564 Ncapd3 protein_coding protein_coding MGP_BALBcJ_T0002451.1 MGP_BALBcJ_G0002360.1 mouse_genomes_project 9 105391534 105392606 - TEC TEC MGP_BALBcJ_T0009254.1 MGP_BALBcJ_G0007435.1 mouse_genomes_project 9 74757674 74793681 - 5730403I07Rik lincRNA lincRNA MGP_BALBcJ_T0092637.1 MGP_BALBcJ_G0034868.1 mouse_genomes_project 9 56012343 56050053 + MGP_BALBcJ_P0092637 Hcn4 protein_coding protein_coding MGP_BALBcJ_T0094786.1 MGP_BALBcJ_G0035303.1 mouse_genomes_project 9 106762699 106781145 - MGP_BALBcJ_P0094786 Fbxw13 protein_coding protein_coding MGP_BALBcJ_T0094787.1 MGP_BALBcJ_G0035303.1 mouse_genomes_project 9 106762720 106781132 - MGP_BALBcJ_P0094787 Fbxw13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094788.1 MGP_BALBcJ_G0035303.1 mouse_genomes_project 9 106765159 106780690 - MGP_BALBcJ_P0094788 Fbxw13 protein_coding protein_coding MGP_BALBcJ_T0094016.1 MGP_BALBcJ_G0035182.1 mouse_genomes_project 9 102115859 102461561 + MGP_BALBcJ_P0094016 Cpne4 protein_coding protein_coding MGP_BALBcJ_T0094017.1 MGP_BALBcJ_G0035182.1 mouse_genomes_project 9 102134966 102461313 + MGP_BALBcJ_P0094017 Cpne4 protein_coding protein_coding MGP_BALBcJ_T0094018.1 MGP_BALBcJ_G0035182.1 mouse_genomes_project 9 102137733 102613585 + MGP_BALBcJ_P0094018 Cpne4 protein_coding protein_coding MGP_BALBcJ_T0094019.1 MGP_BALBcJ_G0035182.1 mouse_genomes_project 9 102138037 102613585 + MGP_BALBcJ_P0094019 Cpne4 protein_coding protein_coding MGP_BALBcJ_T0093061.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68451874 68499407 - MGP_BALBcJ_P0093061 Aqp9 protein_coding protein_coding MGP_BALBcJ_T0093062.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68451876 68499378 - MGP_BALBcJ_P0093062 Aqp9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093063.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68451877 68498751 - MGP_BALBcJ_P0093063 Aqp9 protein_coding protein_coding MGP_BALBcJ_T0093064.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68453059 68508566 - MGP_BALBcJ_P0093064 Aqp9 protein_coding protein_coding MGP_BALBcJ_T0093065.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68499090 68505131 - Aqp9 protein_coding processed_transcript MGP_BALBcJ_T0093066.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68499146 68507802 - Aqp9 protein_coding processed_transcript MGP_BALBcJ_T0093067.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68499592 68508591 - Aqp9 protein_coding processed_transcript MGP_BALBcJ_T0093068.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68499592 68507542 - Aqp9 protein_coding processed_transcript MGP_BALBcJ_T0093069.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68499593 68508586 - Aqp9 protein_coding processed_transcript MGP_BALBcJ_T0093070.1 MGP_BALBcJ_G0034979.1 mouse_genomes_project 9 68505045 68507758 - Aqp9 protein_coding processed_transcript MGP_BALBcJ_T0009250.1 MGP_BALBcJ_G0007432.1 mouse_genomes_project 9 72185317 72187793 - Gm28182 lincRNA lincRNA MGP_BALBcJ_T0093040.1 MGP_BALBcJ_G0034969.1 mouse_genomes_project 9 67372396 67378979 - MGP_BALBcJ_P0093040 Gcnt3 protein_coding protein_coding MGP_BALBcJ_T0002426.1 MGP_BALBcJ_G0002335.1 mouse_genomes_project 9 98648905 98650939 + TEC TEC MGP_BALBcJ_T0091930.1 MGP_BALBcJ_G0034644.1 mouse_genomes_project 9 37950940 37962615 - MGP_BALBcJ_P0091930 Crtam protein_coding protein_coding MGP_BALBcJ_T0091931.1 MGP_BALBcJ_G0034644.1 mouse_genomes_project 9 37950983 37982327 - MGP_BALBcJ_P0091931 Crtam protein_coding protein_coding MGP_BALBcJ_T0091932.1 MGP_BALBcJ_G0034644.1 mouse_genomes_project 9 37950985 37982400 - MGP_BALBcJ_P0091932 Crtam protein_coding protein_coding MGP_BALBcJ_T0091933.1 MGP_BALBcJ_G0034644.1 mouse_genomes_project 9 37950986 37982369 - MGP_BALBcJ_P0091933 Crtam protein_coding protein_coding MGP_BALBcJ_T0005460.1 MGP_BALBcJ_G0004618.1 mouse_genomes_project 9 77690169 77692296 - Gm27227 antisense antisense MGP_BALBcJ_T0092047.1 MGP_BALBcJ_G0034687.1 mouse_genomes_project 9 41723184 41736290 + MGP_BALBcJ_P0092047 Treh protein_coding protein_coding MGP_BALBcJ_T0092048.1 MGP_BALBcJ_G0034687.1 mouse_genomes_project 9 41723186 41736289 + MGP_BALBcJ_P0092048 Treh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092049.1 MGP_BALBcJ_G0034687.1 mouse_genomes_project 9 41723200 41736290 + MGP_BALBcJ_P0092049 Treh protein_coding protein_coding MGP_BALBcJ_T0092050.1 MGP_BALBcJ_G0034687.1 mouse_genomes_project 9 41733280 41736001 + MGP_BALBcJ_P0092050 Treh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094627.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106171972 106177281 + MGP_BALBcJ_P0094627 Impdh2 protein_coding protein_coding MGP_BALBcJ_T0094628.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106172125 106175033 + MGP_BALBcJ_P0094628 Impdh2 protein_coding protein_coding MGP_BALBcJ_T0094629.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106172156 106173395 + Impdh2 protein_coding retained_intron MGP_BALBcJ_T0094630.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106172166 106174069 + Impdh2 protein_coding retained_intron MGP_BALBcJ_T0094631.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106174831 106177091 + MGP_BALBcJ_P0094631 Impdh2 protein_coding protein_coding MGP_BALBcJ_T0094632.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106174965 106175867 + Impdh2 protein_coding retained_intron MGP_BALBcJ_T0094633.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106176896 106177266 + Impdh2 protein_coding retained_intron MGP_BALBcJ_T0094634.1 MGP_BALBcJ_G0035277.1 mouse_genomes_project 9 106176900 106177261 + Impdh2 protein_coding retained_intron MGP_BALBcJ_T0092180.1 MGP_BALBcJ_G0034721.1 mouse_genomes_project 9 43300237 43302532 - MGP_BALBcJ_P0092180 Apoc3 protein_coding protein_coding MGP_BALBcJ_T0092181.1 MGP_BALBcJ_G0034721.1 mouse_genomes_project 9 43300355 43302571 - MGP_BALBcJ_P0092181 Apoc3 protein_coding protein_coding MGP_BALBcJ_T0092182.1 MGP_BALBcJ_G0034721.1 mouse_genomes_project 9 43300502 43302908 - MGP_BALBcJ_P0092182 Apoc3 protein_coding protein_coding MGP_BALBcJ_T0092183.1 MGP_BALBcJ_G0034721.1 mouse_genomes_project 9 43301707 43302741 - MGP_BALBcJ_P0092183 Apoc3 protein_coding protein_coding MGP_BALBcJ_T0016064.1 MGP_BALBcJ_G0014161.1 mouse_genomes_project 9 82514360 82514805 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002368.1 MGP_BALBcJ_G0002278.1 mouse_genomes_project 9 69782376 69785593 + TEC TEC MGP_BALBcJ_T0092171.1 MGP_BALBcJ_G0034718.1 mouse_genomes_project 9 43033930 43053524 - MGP_BALBcJ_P0092171 Pafah1b2 protein_coding protein_coding MGP_BALBcJ_T0095162.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117135206 117153785 + Vill protein_coding retained_intron MGP_BALBcJ_T0095163.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117135206 117140481 + Vill protein_coding retained_intron MGP_BALBcJ_T0095164.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117135206 117153779 + MGP_BALBcJ_P0095164 Vill protein_coding protein_coding MGP_BALBcJ_T0095165.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117135230 117153586 + MGP_BALBcJ_P0095165 Vill protein_coding protein_coding MGP_BALBcJ_T0095166.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117135293 117140852 + MGP_BALBcJ_P0095166 Vill protein_coding protein_coding MGP_BALBcJ_T0095167.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117145793 117153586 + MGP_BALBcJ_P0095167 Vill protein_coding protein_coding MGP_BALBcJ_T0095168.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117145799 117153597 + MGP_BALBcJ_P0095168 Vill protein_coding protein_coding MGP_BALBcJ_T0095169.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117145800 117152402 + MGP_BALBcJ_P0095169 Vill protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095170.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117145803 117149146 + MGP_BALBcJ_P0095170 Vill protein_coding protein_coding MGP_BALBcJ_T0095171.1 MGP_BALBcJ_G0035385.1 mouse_genomes_project 9 117145827 117147687 + Vill protein_coding processed_transcript MGP_BALBcJ_T0092658.1 MGP_BALBcJ_G0034877.1 mouse_genomes_project 9 56857370 56880378 + MGP_BALBcJ_P0092658 Pkm protein_coding protein_coding MGP_BALBcJ_T0092659.1 MGP_BALBcJ_G0034877.1 mouse_genomes_project 9 56857370 56880378 + MGP_BALBcJ_P0092659 Pkm protein_coding protein_coding MGP_BALBcJ_T0018526.1 MGP_BALBcJ_G0015691.1 mouse_genomes_project 9 93100567 93101861 - Gm16127 processed_transcript processed_transcript MGP_BALBcJ_T0092840.1 MGP_BALBcJ_G0034921.1 mouse_genomes_project 9 62282867 62333649 + MGP_BALBcJ_P0092840 Dpp8 protein_coding protein_coding MGP_BALBcJ_T0092841.1 MGP_BALBcJ_G0034921.1 mouse_genomes_project 9 62283131 62331989 + MGP_BALBcJ_P0092841 Dpp8 protein_coding protein_coding MGP_BALBcJ_T0016123.1 MGP_BALBcJ_G0014220.1 mouse_genomes_project 9 106172220 106177216 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094444.1 MGP_BALBcJ_G0035250.1 mouse_genomes_project 9 105557505 105570988 + Gm20661 protein_coding retained_intron MGP_BALBcJ_T0094445.1 MGP_BALBcJ_G0035250.1 mouse_genomes_project 9 105557540 105570022 + Gm20661 protein_coding retained_intron MGP_BALBcJ_T0094446.1 MGP_BALBcJ_G0035250.1 mouse_genomes_project 9 105557734 105570543 + MGP_BALBcJ_P0094446 Gm20661 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009295.1 MGP_BALBcJ_G0007467.1 mouse_genomes_project 9 98871640 98877477 + Gm28979 lincRNA lincRNA MGP_BALBcJ_T0095242.1 MGP_BALBcJ_G0035413.1 mouse_genomes_project 9 118657654 118687628 + MGP_BALBcJ_P0095242 Entpd3 protein_coding protein_coding MGP_BALBcJ_T0095243.1 MGP_BALBcJ_G0035413.1 mouse_genomes_project 9 118677071 118680032 + Entpd3 protein_coding retained_intron MGP_BALBcJ_T0005469.1 MGP_BALBcJ_G0004623.1 mouse_genomes_project 9 92155243 92161856 - Gm16262 antisense antisense MGP_BALBcJ_T0015991.1 MGP_BALBcJ_G0014088.1 mouse_genomes_project 9 9574436 9575421 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002435.1 MGP_BALBcJ_G0002344.1 mouse_genomes_project 9 99819552 99820783 + TEC TEC MGP_BALBcJ_T0011732.1 MGP_BALBcJ_G0009857.1 mouse_genomes_project 9 119358537 119358783 + Gm22987 misc_RNA misc_RNA MGP_BALBcJ_T0094293.1 MGP_BALBcJ_G0035233.1 mouse_genomes_project 9 105143211 105147986 + MGP_BALBcJ_P0094293 Hyal1 protein_coding protein_coding MGP_BALBcJ_T0094294.1 MGP_BALBcJ_G0035233.1 mouse_genomes_project 9 105143222 105145843 + MGP_BALBcJ_P0094294 Hyal1 protein_coding protein_coding MGP_BALBcJ_T0094295.1 MGP_BALBcJ_G0035233.1 mouse_genomes_project 9 105143242 105147263 + MGP_BALBcJ_P0094295 Hyal1 protein_coding protein_coding MGP_BALBcJ_T0094296.1 MGP_BALBcJ_G0035233.1 mouse_genomes_project 9 105143274 105145699 + MGP_BALBcJ_P0094296 Hyal1 protein_coding protein_coding MGP_BALBcJ_T0094303.1 MGP_BALBcJ_G0035233.1 mouse_genomes_project 9 105145877 105147956 + Hyal1 protein_coding retained_intron MGP_BALBcJ_T0091815.1 MGP_BALBcJ_G0034563.1 mouse_genomes_project 9 35265037 35265988 + MGP_BALBcJ_P0091815 Olfr898 protein_coding protein_coding MGP_BALBcJ_T0018460.1 MGP_BALBcJ_G0015668.1 mouse_genomes_project 9 4680753 4691920 + Gm20416 processed_transcript processed_transcript MGP_BALBcJ_T0101985.1 MGP_BALBcJ_G0039831.1 mouse_genomes_project 9 107092968 107425303 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0092844.1 MGP_BALBcJ_G0034923.1 mouse_genomes_project 9 62391974 62438643 + MGP_BALBcJ_P0092844 Igdcc3 protein_coding protein_coding MGP_BALBcJ_T0092845.1 MGP_BALBcJ_G0034923.1 mouse_genomes_project 9 62392235 62438120 + MGP_BALBcJ_P0092845 Igdcc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0093337.1 MGP_BALBcJ_G0035038.1 mouse_genomes_project 9 75872694 75883804 - MGP_BALBcJ_P0093337 Mb21d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093338.1 MGP_BALBcJ_G0035038.1 mouse_genomes_project 9 75873830 75883997 - MGP_BALBcJ_P0093338 Mb21d1 protein_coding protein_coding MGP_BALBcJ_T0098415.1 MGP_BALBcJ_G0036469.1 mouse_genomes_project 9 66161635 66162077 + pseudogene pseudogene MGP_BALBcJ_T0101462.1 MGP_BALBcJ_G0039498.1 mouse_genomes_project 9 37786882 37786972 + Snord14e snoRNA snoRNA MGP_BALBcJ_T0091419.1 MGP_BALBcJ_G0034420.1 mouse_genomes_project 9 18147308 18181305 + MGP_BALBcJ_P0091419 Ilf3 protein_coding protein_coding MGP_BALBcJ_T0091420.1 MGP_BALBcJ_G0034420.1 mouse_genomes_project 9 18147308 18184863 + MGP_BALBcJ_P0091420 Ilf3 protein_coding protein_coding MGP_BALBcJ_T0091421.1 MGP_BALBcJ_G0034420.1 mouse_genomes_project 9 18182379 18184872 + MGP_BALBcJ_P0091421 Ilf3 protein_coding unknown_likely_coding MGP_BALBcJ_T0101448.1 MGP_BALBcJ_G0039484.1 mouse_genomes_project 9 16168115 16168244 + Gm23048 snoRNA snoRNA MGP_BALBcJ_T0101468.1 MGP_BALBcJ_G0039504.1 mouse_genomes_project 9 50765192 50765321 + Gm22304 snoRNA snoRNA MGP_BALBcJ_T0002417.1 MGP_BALBcJ_G0002326.1 mouse_genomes_project 9 96178423 96178939 - TEC TEC MGP_BALBcJ_T0002446.1 MGP_BALBcJ_G0002355.1 mouse_genomes_project 9 102737908 102739317 + TEC TEC MGP_BALBcJ_T0009197.1 MGP_BALBcJ_G0007389.1 mouse_genomes_project 9 29768318 29791992 - Gm27162 lincRNA lincRNA MGP_BALBcJ_T0091890.1 MGP_BALBcJ_G0034626.1 mouse_genomes_project 9 36967613 36968549 + MGP_BALBcJ_P0091890 Olfr978 protein_coding protein_coding MGP_BALBcJ_T0092201.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618405 44941030 + MGP_BALBcJ_P0092201 Cadm1 protein_coding protein_coding MGP_BALBcJ_T0092202.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618443 44938230 + MGP_BALBcJ_P0092202 Cadm1 protein_coding protein_coding MGP_BALBcJ_T0092203.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618476 44945288 + MGP_BALBcJ_P0092203 Cadm1 protein_coding protein_coding MGP_BALBcJ_T0092204.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618489 44941025 + MGP_BALBcJ_P0092204 Cadm1 protein_coding protein_coding MGP_BALBcJ_T0092205.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618489 44938672 + MGP_BALBcJ_P0092205 Cadm1 protein_coding protein_coding MGP_BALBcJ_T0092206.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618584 44906313 + Cadm1 protein_coding retained_intron MGP_BALBcJ_T0092207.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618584 44879726 + Cadm1 protein_coding retained_intron MGP_BALBcJ_T0092208.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618605 44901275 + Cadm1 protein_coding processed_transcript MGP_BALBcJ_T0092209.1 MGP_BALBcJ_G0034728.1 mouse_genomes_project 9 44618605 44938033 + MGP_BALBcJ_P0092209 Cadm1 protein_coding protein_coding MGP_BALBcJ_T0011032.1 MGP_BALBcJ_G0009157.1 mouse_genomes_project 9 36026610 36026694 + Gm25032 miRNA miRNA MGP_BALBcJ_T0094416.1 MGP_BALBcJ_G0035246.1 mouse_genomes_project 9 105502471 105506464 + MGP_BALBcJ_P0094416 Actl11 protein_coding protein_coding MGP_BALBcJ_T0009278.1 MGP_BALBcJ_G0007454.1 mouse_genomes_project 9 90348720 90368550 + Gm28054 lincRNA lincRNA MGP_BALBcJ_T0091876.1 MGP_BALBcJ_G0034612.1 mouse_genomes_project 9 36615588 36616537 + MGP_BALBcJ_P0091876 Olfr961 protein_coding protein_coding MGP_BALBcJ_T0094701.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106471281 106472282 + Slc26a6 protein_coding processed_transcript MGP_BALBcJ_T0094702.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106471346 106480541 + MGP_BALBcJ_P0094702 Slc26a6 protein_coding protein_coding MGP_BALBcJ_T0094703.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472034 106479226 + MGP_BALBcJ_P0094703 Slc26a6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094704.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472034 106482737 + MGP_BALBcJ_P0094704 Slc26a6 protein_coding protein_coding MGP_BALBcJ_T0094705.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472040 106480541 + MGP_BALBcJ_P0094705 Slc26a6 protein_coding protein_coding MGP_BALBcJ_T0094706.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472071 106480541 + Slc26a6 protein_coding retained_intron MGP_BALBcJ_T0094707.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472091 106480541 + Slc26a6 protein_coding retained_intron MGP_BALBcJ_T0094708.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472132 106480541 + MGP_BALBcJ_P0094708 Slc26a6 protein_coding protein_coding MGP_BALBcJ_T0094709.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106472342 106483232 + MGP_BALBcJ_P0094709 Slc26a6 protein_coding unknown_likely_coding MGP_BALBcJ_T0094710.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106474058 106480541 + MGP_BALBcJ_P0094710 Slc26a6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094711.1 MGP_BALBcJ_G0035288.1 mouse_genomes_project 9 106482588 106483228 + MGP_BALBcJ_P0094711 Slc26a6 protein_coding protein_coding MGP_BALBcJ_T0095097.1 MGP_BALBcJ_G0035361.1 mouse_genomes_project 9 112307957 112343934 - MGP_BALBcJ_P0095097 Crtap protein_coding protein_coding MGP_BALBcJ_T0095098.1 MGP_BALBcJ_G0035361.1 mouse_genomes_project 9 112307973 112331438 - Crtap protein_coding retained_intron MGP_BALBcJ_T0002377.1 MGP_BALBcJ_G0002287.1 mouse_genomes_project 9 70376456 70378300 + TEC TEC MGP_BALBcJ_T0002449.1 MGP_BALBcJ_G0002358.1 mouse_genomes_project 9 105197793 105199537 - TEC TEC MGP_BALBcJ_T0092726.1 MGP_BALBcJ_G0034891.1 mouse_genomes_project 9 59275528 59288887 - MGP_BALBcJ_P0092726 Glce protein_coding protein_coding MGP_BALBcJ_T0092727.1 MGP_BALBcJ_G0034891.1 mouse_genomes_project 9 59275528 59343175 - MGP_BALBcJ_P0092727 Glce protein_coding protein_coding MGP_BALBcJ_T0092728.1 MGP_BALBcJ_G0034891.1 mouse_genomes_project 9 59278291 59289121 - Glce protein_coding retained_intron MGP_BALBcJ_T0092729.1 MGP_BALBcJ_G0034891.1 mouse_genomes_project 9 59288748 59343220 - MGP_BALBcJ_P0092729 Glce protein_coding protein_coding MGP_BALBcJ_T0092730.1 MGP_BALBcJ_G0034891.1 mouse_genomes_project 9 59298595 59343174 - Glce protein_coding processed_transcript MGP_BALBcJ_T0094182.1 MGP_BALBcJ_G0035212.1 mouse_genomes_project 9 104145970 104148610 - MGP_BALBcJ_P0094182 Iqcf4 protein_coding protein_coding MGP_BALBcJ_T0009307.1 MGP_BALBcJ_G0007477.1 mouse_genomes_project 9 105160226 105163506 - Lsmem2 lincRNA lincRNA MGP_BALBcJ_T0005468.1 MGP_BALBcJ_G0004622.1 mouse_genomes_project 9 84126760 84132543 + A330041J22Rik antisense antisense MGP_BALBcJ_T0016091.1 MGP_BALBcJ_G0014188.1 mouse_genomes_project 9 93084788 93085230 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092849.1 MGP_BALBcJ_G0034926.1 mouse_genomes_project 9 62552337 62588914 + MGP_BALBcJ_P0092849 Clpx protein_coding protein_coding MGP_BALBcJ_T0092850.1 MGP_BALBcJ_G0034926.1 mouse_genomes_project 9 62552372 62588915 + MGP_BALBcJ_P0092850 Clpx protein_coding protein_coding MGP_BALBcJ_T0092851.1 MGP_BALBcJ_G0034926.1 mouse_genomes_project 9 62552409 62567308 + Clpx protein_coding retained_intron MGP_BALBcJ_T0092852.1 MGP_BALBcJ_G0034926.1 mouse_genomes_project 9 62568229 62576542 + MGP_BALBcJ_P0092852 Clpx protein_coding protein_coding MGP_BALBcJ_T0011082.1 MGP_BALBcJ_G0009207.1 mouse_genomes_project 9 108445453 108445570 - Mir8107 miRNA miRNA MGP_BALBcJ_T0011069.1 MGP_BALBcJ_G0009194.1 mouse_genomes_project 9 102573595 102573699 + Gm23391 miRNA miRNA MGP_BALBcJ_T0092229.1 MGP_BALBcJ_G0034739.1 mouse_genomes_project 9 46040084 46070108 - MGP_BALBcJ_P0092229 Htr3b protein_coding protein_coding MGP_BALBcJ_T0093904.1 MGP_BALBcJ_G0035161.1 mouse_genomes_project 9 100167713 100175861 + MGP_BALBcJ_P0093904 Anapc13 protein_coding protein_coding MGP_BALBcJ_T0093905.1 MGP_BALBcJ_G0035161.1 mouse_genomes_project 9 100167741 100175686 + MGP_BALBcJ_P0093905 Anapc13 protein_coding protein_coding MGP_BALBcJ_T0093906.1 MGP_BALBcJ_G0035161.1 mouse_genomes_project 9 100168080 100175678 + MGP_BALBcJ_P0093906 Anapc13 protein_coding protein_coding MGP_BALBcJ_T0093907.1 MGP_BALBcJ_G0035161.1 mouse_genomes_project 9 100168096 100175678 + MGP_BALBcJ_P0093907 Anapc13 protein_coding protein_coding MGP_BALBcJ_T0093908.1 MGP_BALBcJ_G0035161.1 mouse_genomes_project 9 100169931 100171147 + Anapc13 protein_coding retained_intron MGP_BALBcJ_T0016112.1 MGP_BALBcJ_G0014209.1 mouse_genomes_project 9 100098177 100098378 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018515.1 MGP_BALBcJ_G0015687.1 mouse_genomes_project 9 80549452 80550902 + Gm29054 processed_transcript TEC MGP_BALBcJ_T0018516.1 MGP_BALBcJ_G0015687.1 mouse_genomes_project 9 80549483 80550819 + Gm29054 processed_transcript antisense MGP_BALBcJ_T0009249.1 MGP_BALBcJ_G0007431.1 mouse_genomes_project 9 72180883 72223626 + Gm20649 lincRNA lincRNA MGP_BALBcJ_T0101451.1 MGP_BALBcJ_G0039487.1 mouse_genomes_project 9 21160631 21160726 + Gm22380 snoRNA snoRNA MGP_BALBcJ_T0093778.1 MGP_BALBcJ_G0035130.1 mouse_genomes_project 9 96042921 96046517 + Copb2 protein_coding retained_intron MGP_BALBcJ_T0093779.1 MGP_BALBcJ_G0035130.1 mouse_genomes_project 9 96042931 96067584 + MGP_BALBcJ_P0093779 Copb2 protein_coding protein_coding MGP_BALBcJ_T0093780.1 MGP_BALBcJ_G0035130.1 mouse_genomes_project 9 96059152 96060424 + Copb2 protein_coding retained_intron MGP_BALBcJ_T0093781.1 MGP_BALBcJ_G0035130.1 mouse_genomes_project 9 96066046 96067031 + Copb2 protein_coding retained_intron MGP_BALBcJ_T0093782.1 MGP_BALBcJ_G0035130.1 mouse_genomes_project 9 96066547 96067233 + Copb2 protein_coding retained_intron MGP_BALBcJ_T0093783.1 MGP_BALBcJ_G0035130.1 mouse_genomes_project 9 96066748 96067463 + Copb2 protein_coding retained_intron MGP_BALBcJ_T0093788.1 MGP_BALBcJ_G0035134.1 mouse_genomes_project 9 96334991 96335942 + MGP_BALBcJ_P0093788 protein_coding protein_coding MGP_BALBcJ_T0011730.1 MGP_BALBcJ_G0009855.1 mouse_genomes_project 9 116354982 116355289 + Gm22198 misc_RNA misc_RNA MGP_BALBcJ_T0015996.1 MGP_BALBcJ_G0014093.1 mouse_genomes_project 9 19478336 19478804 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094889.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108134255 108175703 + MGP_BALBcJ_P0094889 Scap protein_coding protein_coding MGP_BALBcJ_T0094890.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108134263 108154277 + Scap protein_coding retained_intron MGP_BALBcJ_T0094891.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108134323 108187574 + MGP_BALBcJ_P0094891 Scap protein_coding protein_coding MGP_BALBcJ_T0094892.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108134517 108154125 + MGP_BALBcJ_P0094892 Scap protein_coding protein_coding MGP_BALBcJ_T0094893.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108134603 108174935 + MGP_BALBcJ_P0094893 Scap protein_coding protein_coding MGP_BALBcJ_T0094894.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108145165 108154125 + MGP_BALBcJ_P0094894 Scap protein_coding protein_coding MGP_BALBcJ_T0094895.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108162314 108164815 + Scap protein_coding retained_intron MGP_BALBcJ_T0094896.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108162747 108174904 + Scap protein_coding processed_transcript MGP_BALBcJ_T0094897.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108176931 108179311 + Scap protein_coding retained_intron MGP_BALBcJ_T0094898.1 MGP_BALBcJ_G0035321.1 mouse_genomes_project 9 108180904 108181388 + Scap protein_coding retained_intron MGP_BALBcJ_T0095019.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109053283 109096697 - MGP_BALBcJ_P0095019 Mlh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095020.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109053310 109096942 - MGP_BALBcJ_P0095020 Mlh1 protein_coding protein_coding MGP_BALBcJ_T0095021.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109053587 109055692 - Mlh1 protein_coding retained_intron MGP_BALBcJ_T0095022.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109054925 109056004 - Mlh1 protein_coding retained_intron MGP_BALBcJ_T0095023.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109054943 109096751 - Mlh1 protein_coding retained_intron MGP_BALBcJ_T0095024.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109066329 109073247 - Mlh1 protein_coding retained_intron MGP_BALBcJ_T0095025.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109066615 109083130 - MGP_BALBcJ_P0095025 Mlh1 protein_coding protein_coding MGP_BALBcJ_T0095026.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109074724 109087364 - MGP_BALBcJ_P0095026 Mlh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095027.1 MGP_BALBcJ_G0035347.1 mouse_genomes_project 9 109082826 109096685 - Mlh1 protein_coding processed_transcript MGP_BALBcJ_T0092642.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56586002 56687820 - MGP_BALBcJ_P0092642 Arih1 protein_coding protein_coding MGP_BALBcJ_T0092643.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56590857 56687824 - MGP_BALBcJ_P0092643 Arih1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092644.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56591038 56687553 - MGP_BALBcJ_P0092644 Arih1 protein_coding protein_coding MGP_BALBcJ_T0092645.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56592604 56603529 - MGP_BALBcJ_P0092645 Arih1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092646.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56592689 56603788 - Arih1 protein_coding retained_intron MGP_BALBcJ_T0092647.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56623204 56687262 - Arih1 protein_coding retained_intron MGP_BALBcJ_T0092648.1 MGP_BALBcJ_G0034872.1 mouse_genomes_project 9 56637691 56687289 - Arih1 protein_coding retained_intron MGP_BALBcJ_T0091843.1 MGP_BALBcJ_G0034585.1 mouse_genomes_project 9 35744486 35745618 + MGP_BALBcJ_P0091843 Olfr922 protein_coding protein_coding MGP_BALBcJ_T0009324.1 MGP_BALBcJ_G0007487.1 mouse_genomes_project 9 115933764 115941839 + Gm26614 lincRNA lincRNA MGP_BALBcJ_T0002372.1 MGP_BALBcJ_G0002282.1 mouse_genomes_project 9 70068462 70068672 + TEC TEC MGP_BALBcJ_T0009296.1 MGP_BALBcJ_G0007468.1 mouse_genomes_project 9 99886205 99895003 + Gm26846 lincRNA lincRNA MGP_BALBcJ_T0094084.1 MGP_BALBcJ_G0035192.1 mouse_genomes_project 9 103565653 103574465 - Col6a4 protein_coding processed_transcript MGP_BALBcJ_T0094085.1 MGP_BALBcJ_G0035192.1 mouse_genomes_project 9 103566664 103673828 - MGP_BALBcJ_P0094085 Col6a4 protein_coding protein_coding MGP_BALBcJ_T0094086.1 MGP_BALBcJ_G0035192.1 mouse_genomes_project 9 103648395 103649745 - Col6a4 protein_coding processed_transcript MGP_BALBcJ_T0092009.1 MGP_BALBcJ_G0034667.1 mouse_genomes_project 9 41277117 41283630 + MGP_BALBcJ_P0092009 Ccdc153 protein_coding protein_coding MGP_BALBcJ_T0091299.1 MGP_BALBcJ_G0034366.1 mouse_genomes_project 9 16234190 16235129 + MGP_BALBcJ_P0091299 Olfr851 protein_coding protein_coding MGP_BALBcJ_T0101443.1 MGP_BALBcJ_G0039479.1 mouse_genomes_project 9 12002860 12002934 + Gm24357 snoRNA snoRNA MGP_BALBcJ_T0091594.1 MGP_BALBcJ_G0034484.1 mouse_genomes_project 9 27858842 27896899 + MGP_BALBcJ_P0091594 Zbtb44 protein_coding protein_coding MGP_BALBcJ_T0091595.1 MGP_BALBcJ_G0034484.1 mouse_genomes_project 9 27881123 27896627 + MGP_BALBcJ_P0091595 Zbtb44 protein_coding protein_coding MGP_BALBcJ_T0091505.1 MGP_BALBcJ_G0034455.1 mouse_genomes_project 9 19205104 19240189 + MGP_BALBcJ_P0091505 9530077C05Rik protein_coding protein_coding MGP_BALBcJ_T0091570.1 MGP_BALBcJ_G0034478.1 mouse_genomes_project 9 24204175 24209061 + MGP_BALBcJ_P0091570 Spata19 protein_coding protein_coding MGP_BALBcJ_T0009329.1 MGP_BALBcJ_G0007492.1 mouse_genomes_project 9 117993709 117995870 - Gm2449 lincRNA lincRNA MGP_BALBcJ_T0016010.1 MGP_BALBcJ_G0014107.1 mouse_genomes_project 9 41378626 41379460 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093365.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77487637 77515519 + Senp6 protein_coding retained_intron MGP_BALBcJ_T0093366.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77487637 77567419 + MGP_BALBcJ_P0093366 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093367.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77487670 77535053 + MGP_BALBcJ_P0093367 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093368.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77487833 77567247 + MGP_BALBcJ_P0093368 Senp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093369.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77488258 77566328 + MGP_BALBcJ_P0093369 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093370.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77488551 77508498 + Senp6 protein_coding processed_transcript MGP_BALBcJ_T0093371.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77513302 77543919 + MGP_BALBcJ_P0093371 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093372.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77524228 77566178 + MGP_BALBcJ_P0093372 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093373.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77535321 77540046 + MGP_BALBcJ_P0093373 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093374.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77535338 77543991 + Senp6 protein_coding processed_transcript MGP_BALBcJ_T0093375.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77545735 77558484 + MGP_BALBcJ_P0093375 Senp6 protein_coding protein_coding MGP_BALBcJ_T0093376.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77558284 77566637 + Senp6 protein_coding retained_intron MGP_BALBcJ_T0093377.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77560946 77566175 + Senp6 protein_coding retained_intron MGP_BALBcJ_T0093378.1 MGP_BALBcJ_G0035047.1 mouse_genomes_project 9 77564510 77566471 + Senp6 protein_coding retained_intron MGP_BALBcJ_T0091814.1 MGP_BALBcJ_G0034562.1 mouse_genomes_project 9 35245484 35246552 + MGP_BALBcJ_P0091814 Olfr25 protein_coding protein_coding MGP_BALBcJ_T0091438.1 MGP_BALBcJ_G0034423.1 mouse_genomes_project 9 18288584 18291391 - MGP_BALBcJ_P0091438 Tmed1 protein_coding protein_coding MGP_BALBcJ_T0092386.1 MGP_BALBcJ_G0034792.1 mouse_genomes_project 9 51030406 51091931 - MGP_BALBcJ_P0092386 Elmod1 protein_coding protein_coding MGP_BALBcJ_T0092387.1 MGP_BALBcJ_G0034792.1 mouse_genomes_project 9 51030406 51055676 - MGP_BALBcJ_P0092387 Elmod1 protein_coding protein_coding MGP_BALBcJ_T0091959.1 MGP_BALBcJ_G0034652.1 mouse_genomes_project 9 40107557 40115328 - MGP_BALBcJ_P0091959 Tmem136 protein_coding protein_coding MGP_BALBcJ_T0101511.1 MGP_BALBcJ_G0039547.1 mouse_genomes_project 9 118244299 118244448 + Snora62 snoRNA snoRNA MGP_BALBcJ_T0091169.1 MGP_BALBcJ_G0034315.1 mouse_genomes_project 9 10256021 10349618 + MGP_BALBcJ_P0091169 protein_coding protein_coding MGP_BALBcJ_T0091170.1 MGP_BALBcJ_G0034315.1 mouse_genomes_project 9 10257668 10347573 + MGP_BALBcJ_P0091170 protein_coding protein_coding MGP_BALBcJ_T0091171.1 MGP_BALBcJ_G0034315.1 mouse_genomes_project 9 10301713 10347575 + protein_coding processed_transcript MGP_BALBcJ_T0091172.1 MGP_BALBcJ_G0034315.1 mouse_genomes_project 9 10301713 10349763 + MGP_BALBcJ_P0091172 protein_coding protein_coding MGP_BALBcJ_T0091160.1 MGP_BALBcJ_G0034311.1 mouse_genomes_project 9 6366551 7630076 - MGP_BALBcJ_P0091160 Cntn5 protein_coding protein_coding MGP_BALBcJ_T0091161.1 MGP_BALBcJ_G0034311.1 mouse_genomes_project 9 6366629 7630125 - MGP_BALBcJ_P0091161 Cntn5 protein_coding protein_coding MGP_BALBcJ_T0091162.1 MGP_BALBcJ_G0034311.1 mouse_genomes_project 9 6367023 7142785 - MGP_BALBcJ_P0091162 Cntn5 protein_coding protein_coding MGP_BALBcJ_T0091163.1 MGP_BALBcJ_G0034311.1 mouse_genomes_project 9 6367023 7142785 - MGP_BALBcJ_P0091163 Cntn5 protein_coding protein_coding MGP_BALBcJ_T0091164.1 MGP_BALBcJ_G0034311.1 mouse_genomes_project 9 7366607 7629799 - Cntn5 protein_coding retained_intron MGP_BALBcJ_T0093167.1 MGP_BALBcJ_G0034992.1 mouse_genomes_project 9 70277777 70304306 + MGP_BALBcJ_P0093167 Pygo1 protein_coding protein_coding MGP_BALBcJ_T0091285.1 MGP_BALBcJ_G0034352.1 mouse_genomes_project 9 15583000 15583966 + MGP_BALBcJ_P0091285 Olfr829 protein_coding protein_coding MGP_BALBcJ_T0093964.1 MGP_BALBcJ_G0035172.1 mouse_genomes_project 9 100901867 100913977 - MGP_BALBcJ_P0093964 Cdv3 protein_coding unknown_likely_coding MGP_BALBcJ_T0093965.1 MGP_BALBcJ_G0035172.1 mouse_genomes_project 9 100904088 100913736 - MGP_BALBcJ_P0093965 Cdv3 protein_coding protein_coding MGP_BALBcJ_T0093966.1 MGP_BALBcJ_G0035172.1 mouse_genomes_project 9 100904130 100914228 - MGP_BALBcJ_P0093966 Cdv3 protein_coding protein_coding MGP_BALBcJ_T0093967.1 MGP_BALBcJ_G0035172.1 mouse_genomes_project 9 100910212 100913589 - Cdv3 protein_coding retained_intron MGP_BALBcJ_T0094731.1 MGP_BALBcJ_G0035292.1 mouse_genomes_project 9 106561302 106562457 + MGP_BALBcJ_P0094731 Ucn2 protein_coding protein_coding MGP_BALBcJ_T0018540.1 MGP_BALBcJ_G0015696.1 mouse_genomes_project 9 100973412 101013748 + 5830418P13Rik processed_transcript antisense MGP_BALBcJ_T0018541.1 MGP_BALBcJ_G0015696.1 mouse_genomes_project 9 100975312 100976453 + 5830418P13Rik processed_transcript retained_intron MGP_BALBcJ_T0018542.1 MGP_BALBcJ_G0015696.1 mouse_genomes_project 9 100975336 100977966 + 5830418P13Rik processed_transcript antisense MGP_BALBcJ_T0011722.1 MGP_BALBcJ_G0009847.1 mouse_genomes_project 9 77451978 77452264 + Gm25433 misc_RNA misc_RNA MGP_BALBcJ_T0016001.1 MGP_BALBcJ_G0014098.1 mouse_genomes_project 9 31079828 31080390 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0093791.1 MGP_BALBcJ_G0035137.1 mouse_genomes_project 9 96471160 96492069 + MGP_BALBcJ_P0093791 Faim protein_coding protein_coding MGP_BALBcJ_T0093792.1 MGP_BALBcJ_G0035137.1 mouse_genomes_project 9 96471238 96475501 + Faim protein_coding retained_intron MGP_BALBcJ_T0093793.1 MGP_BALBcJ_G0035137.1 mouse_genomes_project 9 96471244 96478077 + Faim protein_coding retained_intron MGP_BALBcJ_T0093794.1 MGP_BALBcJ_G0035137.1 mouse_genomes_project 9 96476669 96491736 + MGP_BALBcJ_P0093794 Faim protein_coding protein_coding MGP_BALBcJ_T0095214.1 MGP_BALBcJ_G0035401.1 mouse_genomes_project 9 117995901 118027630 + MGP_BALBcJ_P0095214 Wdr48 protein_coding protein_coding MGP_BALBcJ_T0095333.1 MGP_BALBcJ_G0035439.1 mouse_genomes_project 9 120915132 120945293 + MGP_BALBcJ_P0095333 Tcaim protein_coding protein_coding MGP_BALBcJ_T0095334.1 MGP_BALBcJ_G0035439.1 mouse_genomes_project 9 120915154 120921453 + Tcaim protein_coding processed_transcript MGP_BALBcJ_T0095335.1 MGP_BALBcJ_G0035439.1 mouse_genomes_project 9 120915189 120945286 + MGP_BALBcJ_P0095335 Tcaim protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095213.1 MGP_BALBcJ_G0035400.1 mouse_genomes_project 9 117859190 117940074 - MGP_BALBcJ_P0095213 Scn11a protein_coding protein_coding MGP_BALBcJ_T0094654.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106215514 106247100 - MGP_BALBcJ_P0094654 Arih2 protein_coding unknown_likely_coding MGP_BALBcJ_T0094655.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106215517 106267595 - MGP_BALBcJ_P0094655 Arih2 protein_coding protein_coding MGP_BALBcJ_T0094656.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106215522 106219159 - Arih2 protein_coding retained_intron MGP_BALBcJ_T0094657.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106217261 106267600 - MGP_BALBcJ_P0094657 Arih2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094658.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106217383 106221485 - MGP_BALBcJ_P0094658 Arih2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094659.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106217518 106219904 - Arih2 protein_coding retained_intron MGP_BALBcJ_T0094660.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106217849 106220507 - Arih2 protein_coding retained_intron MGP_BALBcJ_T0094661.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106222697 106267601 - MGP_BALBcJ_P0094661 Arih2 protein_coding protein_coding MGP_BALBcJ_T0094662.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106222781 106262120 - MGP_BALBcJ_P0094662 Arih2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094663.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106227565 106247917 - Arih2 protein_coding retained_intron MGP_BALBcJ_T0094664.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106228565 106267533 - Arih2 protein_coding retained_intron MGP_BALBcJ_T0094665.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106229582 106267557 - MGP_BALBcJ_P0094665 Arih2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094666.1 MGP_BALBcJ_G0035282.1 mouse_genomes_project 9 106262720 106267584 - Arih2 protein_coding retained_intron MGP_BALBcJ_T0016007.1 MGP_BALBcJ_G0014104.1 mouse_genomes_project 9 34570974 34571968 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009185.1 MGP_BALBcJ_G0007377.1 mouse_genomes_project 9 11522485 11524708 + Gm16302 lincRNA lincRNA MGP_BALBcJ_T0016041.1 MGP_BALBcJ_G0014138.1 mouse_genomes_project 9 72044522 72044829 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092218.1 MGP_BALBcJ_G0034733.1 mouse_genomes_project 9 45564868 45582299 - MGP_BALBcJ_P0092218 Rexo2 protein_coding protein_coding MGP_BALBcJ_T0011820.1 MGP_BALBcJ_G0009917.1 mouse_genomes_project 9 117312205 117324497 - MGP_BALBcJ_P0011820 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0101437.1 MGP_BALBcJ_G0039473.1 mouse_genomes_project 9 1772426 1772561 + Gm24896 snoRNA snoRNA MGP_BALBcJ_T0094532.1 MGP_BALBcJ_G0035265.1 mouse_genomes_project 9 105912948 105918049 + Rhoa protein_coding retained_intron MGP_BALBcJ_T0094533.1 MGP_BALBcJ_G0035265.1 mouse_genomes_project 9 105913306 105943198 + MGP_BALBcJ_P0094533 Rhoa protein_coding protein_coding MGP_BALBcJ_T0094534.1 MGP_BALBcJ_G0035265.1 mouse_genomes_project 9 105913338 105937380 + MGP_BALBcJ_P0094534 Rhoa protein_coding protein_coding MGP_BALBcJ_T0094535.1 MGP_BALBcJ_G0035265.1 mouse_genomes_project 9 105937023 105943203 + Rhoa protein_coding retained_intron MGP_BALBcJ_T0091625.1 MGP_BALBcJ_G0034493.1 mouse_genomes_project 9 29238017 29265254 + MGP_BALBcJ_P0091625 Kcnj1 protein_coding protein_coding MGP_BALBcJ_T0091626.1 MGP_BALBcJ_G0034493.1 mouse_genomes_project 9 29260046 29265254 + MGP_BALBcJ_P0091626 Kcnj1 protein_coding protein_coding MGP_BALBcJ_T0011027.1 MGP_BALBcJ_G0009152.1 mouse_genomes_project 9 18395457 18395590 - Mir1946b miRNA miRNA MGP_BALBcJ_T0016048.1 MGP_BALBcJ_G0014145.1 mouse_genomes_project 9 74377575 74377780 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005446.1 MGP_BALBcJ_G0004606.1 mouse_genomes_project 9 66683728 66699459 - Gm15511 antisense antisense MGP_BALBcJ_T0094137.1 MGP_BALBcJ_G0035204.1 mouse_genomes_project 9 104029733 104033687 + MGP_BALBcJ_P0094137 Abhd14b protein_coding protein_coding MGP_BALBcJ_T0094138.1 MGP_BALBcJ_G0035204.1 mouse_genomes_project 9 104029737 104033712 + MGP_BALBcJ_P0094138 Abhd14b protein_coding protein_coding MGP_BALBcJ_T0094139.1 MGP_BALBcJ_G0035204.1 mouse_genomes_project 9 104030150 104034208 + MGP_BALBcJ_P0094139 Abhd14b protein_coding protein_coding MGP_BALBcJ_T0094140.1 MGP_BALBcJ_G0035204.1 mouse_genomes_project 9 104030563 104035018 + MGP_BALBcJ_P0094140 Abhd14b protein_coding protein_coding MGP_BALBcJ_T0094141.1 MGP_BALBcJ_G0035204.1 mouse_genomes_project 9 104030598 104034176 + MGP_BALBcJ_P0094141 Abhd14b protein_coding protein_coding MGP_BALBcJ_T0094142.1 MGP_BALBcJ_G0035204.1 mouse_genomes_project 9 104030637 104034148 + MGP_BALBcJ_P0094142 Abhd14b protein_coding protein_coding MGP_BALBcJ_T0091762.1 MGP_BALBcJ_G0034530.1 mouse_genomes_project 9 34104182 34130641 - MGP_BALBcJ_P0091762 Slc37a2 protein_coding protein_coding MGP_BALBcJ_T0091763.1 MGP_BALBcJ_G0034530.1 mouse_genomes_project 9 34105349 34130317 - MGP_BALBcJ_P0091763 Slc37a2 protein_coding protein_coding MGP_BALBcJ_T0091764.1 MGP_BALBcJ_G0034530.1 mouse_genomes_project 9 34105545 34110188 - Slc37a2 protein_coding retained_intron MGP_BALBcJ_T0092668.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 56952804 57132446 + MGP_BALBcJ_P0092668 Myo9a protein_coding protein_coding MGP_BALBcJ_T0092669.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 56952804 57132446 + MGP_BALBcJ_P0092669 Myo9a protein_coding protein_coding MGP_BALBcJ_T0092670.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 56952804 57132446 + MGP_BALBcJ_P0092670 Myo9a protein_coding protein_coding MGP_BALBcJ_T0092671.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 57073611 57088320 + Myo9a protein_coding processed_transcript MGP_BALBcJ_T0092672.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 57099469 57109546 + Myo9a protein_coding retained_intron MGP_BALBcJ_T0092673.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 57109118 57113898 + Myo9a protein_coding retained_intron MGP_BALBcJ_T0092674.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 57110371 57115821 + Myo9a protein_coding retained_intron MGP_BALBcJ_T0092675.1 MGP_BALBcJ_G0034880.1 mouse_genomes_project 9 57113145 57114188 + Myo9a protein_coding retained_intron MGP_BALBcJ_T0016025.1 MGP_BALBcJ_G0014122.1 mouse_genomes_project 9 68203602 68204980 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092492.1 MGP_BALBcJ_G0034827.1 mouse_genomes_project 9 54068058 54079230 - MGP_BALBcJ_P0092492 Snx33 protein_coding protein_coding MGP_BALBcJ_T0093201.1 MGP_BALBcJ_G0035001.1 mouse_genomes_project 9 70466004 70475638 + MGP_BALBcJ_P0093201 Rsl24d1 protein_coding protein_coding MGP_BALBcJ_T0093202.1 MGP_BALBcJ_G0035001.1 mouse_genomes_project 9 70466026 70476259 + MGP_BALBcJ_P0093202 Rsl24d1 protein_coding protein_coding MGP_BALBcJ_T0093203.1 MGP_BALBcJ_G0035001.1 mouse_genomes_project 9 70466081 70475495 + MGP_BALBcJ_P0093203 Rsl24d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093204.1 MGP_BALBcJ_G0035001.1 mouse_genomes_project 9 70467174 70475308 + MGP_BALBcJ_P0093204 Rsl24d1 protein_coding protein_coding MGP_BALBcJ_T0094263.1 MGP_BALBcJ_G0035228.1 mouse_genomes_project 9 105108488 105111968 + MGP_BALBcJ_P0094263 Nprl2 protein_coding protein_coding MGP_BALBcJ_T0094264.1 MGP_BALBcJ_G0035228.1 mouse_genomes_project 9 105108503 105110896 + MGP_BALBcJ_P0094264 Nprl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094265.1 MGP_BALBcJ_G0035228.1 mouse_genomes_project 9 105108507 105111957 + Nprl2 protein_coding retained_intron MGP_BALBcJ_T0094266.1 MGP_BALBcJ_G0035228.1 mouse_genomes_project 9 105108523 105109950 + Nprl2 protein_coding retained_intron MGP_BALBcJ_T0094267.1 MGP_BALBcJ_G0035228.1 mouse_genomes_project 9 105110238 105110722 + Nprl2 protein_coding retained_intron MGP_BALBcJ_T0002438.1 MGP_BALBcJ_G0002347.1 mouse_genomes_project 9 100980965 100983173 + TEC TEC MGP_BALBcJ_T0005439.1 MGP_BALBcJ_G0004602.1 mouse_genomes_project 9 63696002 63698898 - Gm28379 antisense antisense MGP_BALBcJ_T0005440.1 MGP_BALBcJ_G0004602.1 mouse_genomes_project 9 63696559 63727223 - Gm28379 antisense antisense MGP_BALBcJ_T0009193.1 MGP_BALBcJ_G0007385.1 mouse_genomes_project 9 22008683 22009130 + Gm29375 lincRNA lincRNA MGP_BALBcJ_T0005501.1 MGP_BALBcJ_G0004644.1 mouse_genomes_project 9 103826530 103828194 + 4930500F10Rik antisense antisense MGP_BALBcJ_T0011725.1 MGP_BALBcJ_G0009850.1 mouse_genomes_project 9 100536690 100537012 + Gm25842 misc_RNA misc_RNA MGP_BALBcJ_T0009325.1 MGP_BALBcJ_G0007488.1 mouse_genomes_project 9 116196433 116217076 + Gm17399 lincRNA lincRNA MGP_BALBcJ_T0101986.1 MGP_BALBcJ_G0035378.1 mouse_genomes_project 9 115936624 116073849 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101987.1 MGP_BALBcJ_G0035378.1 mouse_genomes_project 9 115973660 116074011 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101988.1 MGP_BALBcJ_G0035378.1 mouse_genomes_project 9 116026486 116074011 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101989.1 MGP_BALBcJ_G0035378.1 mouse_genomes_project 9 116072671 116097167 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0093595.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87533435 87556377 - MGP_BALBcJ_P0093595 Morf4l1 protein_coding protein_coding MGP_BALBcJ_T0093596.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87533440 87556442 - Morf4l1 protein_coding retained_intron MGP_BALBcJ_T0093597.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87534069 87556091 - Morf4l1 protein_coding processed_transcript MGP_BALBcJ_T0093598.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87535846 87537554 - Morf4l1 protein_coding retained_intron MGP_BALBcJ_T0093599.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87538837 87539744 - Morf4l1 protein_coding retained_intron MGP_BALBcJ_T0093600.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87539262 87556461 - MGP_BALBcJ_P0093600 Morf4l1 protein_coding protein_coding MGP_BALBcJ_T0093601.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87539740 87556331 - Morf4l1 protein_coding processed_transcript MGP_BALBcJ_T0093602.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87539740 87556500 - MGP_BALBcJ_P0093602 Morf4l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093603.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87543738 87556412 - Morf4l1 protein_coding retained_intron MGP_BALBcJ_T0093604.1 MGP_BALBcJ_G0035093.1 mouse_genomes_project 9 87549448 87556385 - Morf4l1 protein_coding retained_intron MGP_BALBcJ_T0092342.1 MGP_BALBcJ_G0034774.1 mouse_genomes_project 9 48764705 48768853 + MGP_BALBcJ_P0092342 Gm7293 protein_coding protein_coding MGP_BALBcJ_T0018550.1 MGP_BALBcJ_G0015700.1 mouse_genomes_project 9 108808519 108827310 + Gm10030 processed_transcript antisense MGP_BALBcJ_T0018551.1 MGP_BALBcJ_G0015700.1 mouse_genomes_project 9 108819653 108825806 + Gm10030 processed_transcript retained_intron MGP_BALBcJ_T0018552.1 MGP_BALBcJ_G0015700.1 mouse_genomes_project 9 108824091 108826111 + Gm10030 processed_transcript processed_transcript MGP_BALBcJ_T0093984.1 MGP_BALBcJ_G0035177.1 mouse_genomes_project 9 101609320 101626073 - MGP_BALBcJ_P0093984 Uba5 protein_coding protein_coding MGP_BALBcJ_T0093985.1 MGP_BALBcJ_G0035177.1 mouse_genomes_project 9 101610369 101619513 - MGP_BALBcJ_P0093985 Uba5 protein_coding protein_coding MGP_BALBcJ_T0093986.1 MGP_BALBcJ_G0035177.1 mouse_genomes_project 9 101612303 101626002 - MGP_BALBcJ_P0093986 Uba5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093987.1 MGP_BALBcJ_G0035177.1 mouse_genomes_project 9 101620095 101623393 - Uba5 protein_coding retained_intron MGP_BALBcJ_T0009298.1 MGP_BALBcJ_G0007470.1 mouse_genomes_project 9 100234077 100235028 + 4930533D04Rik lincRNA lincRNA MGP_BALBcJ_T0002342.1 MGP_BALBcJ_G0002252.1 mouse_genomes_project 9 21548584 21550438 - TEC TEC MGP_BALBcJ_T0095212.1 MGP_BALBcJ_G0035399.1 mouse_genomes_project 9 117714293 117824639 - MGP_BALBcJ_P0095212 Scn10a protein_coding protein_coding MGP_BALBcJ_T0016072.1 MGP_BALBcJ_G0014169.1 mouse_genomes_project 9 85657045 85657867 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092544.1 MGP_BALBcJ_G0034843.1 mouse_genomes_project 9 54731231 54759967 + MGP_BALBcJ_P0092544 Scamp2 protein_coding protein_coding MGP_BALBcJ_T0016127.1 MGP_BALBcJ_G0014224.1 mouse_genomes_project 9 108892242 108892595 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009216.1 MGP_BALBcJ_G0007405.1 mouse_genomes_project 9 43394761 43397816 - 4930448E22Rik lincRNA lincRNA MGP_BALBcJ_T0092418.1 MGP_BALBcJ_G0034805.1 mouse_genomes_project 9 52040963 52068581 + MGP_BALBcJ_P0092418 Hykk protein_coding protein_coding MGP_BALBcJ_T0092419.1 MGP_BALBcJ_G0034805.1 mouse_genomes_project 9 52040991 52049134 + Hykk protein_coding retained_intron MGP_BALBcJ_T0092420.1 MGP_BALBcJ_G0034805.1 mouse_genomes_project 9 52040992 52056533 + Hykk protein_coding retained_intron MGP_BALBcJ_T0092421.1 MGP_BALBcJ_G0034805.1 mouse_genomes_project 9 52041027 52042921 + Hykk protein_coding processed_transcript MGP_BALBcJ_T0005406.1 MGP_BALBcJ_G0004581.1 mouse_genomes_project 9 33627553 33644373 + Gm26787 antisense antisense MGP_BALBcJ_T0100217.1 MGP_BALBcJ_G0038253.1 mouse_genomes_project 9 92097743 92097839 + Gm24178 snRNA snRNA MGP_BALBcJ_T0016108.1 MGP_BALBcJ_G0014205.1 mouse_genomes_project 9 98867164 98867417 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091854.1 MGP_BALBcJ_G0034596.1 mouse_genomes_project 9 36028897 36030016 - MGP_BALBcJ_P0091854 Olfr938 protein_coding protein_coding MGP_BALBcJ_T0016129.1 MGP_BALBcJ_G0014226.1 mouse_genomes_project 9 115105679 115106041 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091477.1 MGP_BALBcJ_G0034439.1 mouse_genomes_project 9 18744478 18749156 - MGP_BALBcJ_P0091477 Epor protein_coding protein_coding MGP_BALBcJ_T0092112.1 MGP_BALBcJ_G0034701.1 mouse_genomes_project 9 42136003 42167545 + MGP_BALBcJ_P0092112 Amica1 protein_coding protein_coding MGP_BALBcJ_T0002398.1 MGP_BALBcJ_G0002307.1 mouse_genomes_project 9 85133206 85135035 - TEC TEC MGP_BALBcJ_T0091606.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28221155 28257231 + MGP_BALBcJ_P0091606 Nfrkb protein_coding protein_coding MGP_BALBcJ_T0091607.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28221160 28257231 + MGP_BALBcJ_P0091607 Nfrkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091608.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28221167 28231032 + MGP_BALBcJ_P0091608 Nfrkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091609.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28221176 28257231 + MGP_BALBcJ_P0091609 Nfrkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091610.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28221192 28257240 + MGP_BALBcJ_P0091610 Nfrkb protein_coding unknown_likely_coding MGP_BALBcJ_T0091611.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28229074 28235481 + Nfrkb protein_coding retained_intron MGP_BALBcJ_T0091612.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28233514 28235453 + Nfrkb protein_coding retained_intron MGP_BALBcJ_T0091613.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28235501 28257231 + Nfrkb protein_coding retained_intron MGP_BALBcJ_T0091614.1 MGP_BALBcJ_G0034488.1 mouse_genomes_project 9 28244570 28245616 + Nfrkb protein_coding retained_intron MGP_BALBcJ_T0091707.1 MGP_BALBcJ_G0034517.1 mouse_genomes_project 9 32987460 32993291 - MGP_BALBcJ_P0091707 Gm5916 protein_coding protein_coding MGP_BALBcJ_T0091096.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3634188 3887923 - MGP_BALBcJ_P0091096 Dync2h1 protein_coding protein_coding MGP_BALBcJ_T0091097.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3634188 3878177 - MGP_BALBcJ_P0091097 Dync2h1 protein_coding protein_coding MGP_BALBcJ_T0091098.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3634989 3878088 - MGP_BALBcJ_P0091098 Dync2h1 protein_coding protein_coding MGP_BALBcJ_T0091099.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3635150 3878163 - MGP_BALBcJ_P0091099 Dync2h1 protein_coding unknown_likely_coding MGP_BALBcJ_T0091100.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3646144 3661330 - Dync2h1 protein_coding retained_intron MGP_BALBcJ_T0091101.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3729543 3812250 - MGP_BALBcJ_P0091101 Dync2h1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091102.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3843760 3878175 - Dync2h1 protein_coding retained_intron MGP_BALBcJ_T0091103.1 MGP_BALBcJ_G0034288.1 mouse_genomes_project 9 3850488 3878096 - MGP_BALBcJ_P0091103 Dync2h1 protein_coding protein_coding MGP_BALBcJ_T0094490.1 MGP_BALBcJ_G0035257.1 mouse_genomes_project 9 105654641 105657184 + MGP_BALBcJ_P0094490 Amigo3 protein_coding protein_coding MGP_BALBcJ_T0095095.1 MGP_BALBcJ_G0035359.1 mouse_genomes_project 9 111938976 111981869 + MGP_BALBcJ_P0095095 Susd5 protein_coding protein_coding MGP_BALBcJ_T0011077.1 MGP_BALBcJ_G0009202.1 mouse_genomes_project 9 106180473 106180558 + Mir425 miRNA miRNA MGP_BALBcJ_T0100181.1 MGP_BALBcJ_G0038217.1 mouse_genomes_project 9 42697217 42697324 - Gm22069 snRNA snRNA MGP_BALBcJ_T0092028.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41414799 41428126 + MGP_BALBcJ_P0092028 Hyou1 protein_coding protein_coding MGP_BALBcJ_T0092029.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41414855 41426800 + MGP_BALBcJ_P0092029 Hyou1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092030.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41414866 41426013 + Hyou1 protein_coding retained_intron MGP_BALBcJ_T0092031.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41414882 41428120 + MGP_BALBcJ_P0092031 Hyou1 protein_coding protein_coding MGP_BALBcJ_T0092032.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41414893 41421384 + Hyou1 protein_coding retained_intron MGP_BALBcJ_T0092033.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41414932 41426379 + MGP_BALBcJ_P0092033 Hyou1 protein_coding protein_coding MGP_BALBcJ_T0092034.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41415838 41419461 + MGP_BALBcJ_P0092034 Hyou1 protein_coding protein_coding MGP_BALBcJ_T0092035.1 MGP_BALBcJ_G0034677.1 mouse_genomes_project 9 41425937 41426589 + Hyou1 protein_coding retained_intron MGP_BALBcJ_T0091887.1 MGP_BALBcJ_G0034623.1 mouse_genomes_project 9 36922877 36923957 + MGP_BALBcJ_P0091887 Olfr974 protein_coding protein_coding MGP_BALBcJ_T0095202.1 MGP_BALBcJ_G0035396.1 mouse_genomes_project 9 117499049 117533583 + MGP_BALBcJ_P0095202 Acvr2b protein_coding protein_coding MGP_BALBcJ_T0095203.1 MGP_BALBcJ_G0035396.1 mouse_genomes_project 9 117499106 117533583 + MGP_BALBcJ_P0095203 Acvr2b protein_coding protein_coding MGP_BALBcJ_T0095204.1 MGP_BALBcJ_G0035396.1 mouse_genomes_project 9 117499151 117533543 + MGP_BALBcJ_P0095204 Acvr2b protein_coding unknown_likely_coding MGP_BALBcJ_T0091968.1 MGP_BALBcJ_G0034659.1 mouse_genomes_project 9 41067581 41073086 + MGP_BALBcJ_P0091968 Thy1 protein_coding protein_coding MGP_BALBcJ_T0011023.1 MGP_BALBcJ_G0009148.1 mouse_genomes_project 9 17682128 17682203 - Mir7081 miRNA miRNA MGP_BALBcJ_T0009283.1 MGP_BALBcJ_G0007456.1 mouse_genomes_project 9 92125544 92127155 - Gm29395 lincRNA lincRNA MGP_BALBcJ_T0095083.1 MGP_BALBcJ_G0035356.1 mouse_genomes_project 9 111690404 111801549 + MGP_BALBcJ_P0095083 Clasp2 protein_coding protein_coding MGP_BALBcJ_T0095084.1 MGP_BALBcJ_G0035356.1 mouse_genomes_project 9 111690404 111801549 + MGP_BALBcJ_P0095084 Clasp2 protein_coding protein_coding MGP_BALBcJ_T0095085.1 MGP_BALBcJ_G0035356.1 mouse_genomes_project 9 111690418 111799995 + MGP_BALBcJ_P0095085 Clasp2 protein_coding protein_coding MGP_BALBcJ_T0094714.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106510030 106523588 + MGP_BALBcJ_P0094714 Uqcrc1 protein_coding protein_coding MGP_BALBcJ_T0094715.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106510111 106518870 + MGP_BALBcJ_P0094715 Uqcrc1 protein_coding protein_coding MGP_BALBcJ_T0094716.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106510112 106518686 + MGP_BALBcJ_P0094716 Uqcrc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094717.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106510289 106518405 + Uqcrc1 protein_coding retained_intron MGP_BALBcJ_T0094718.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106515923 106518992 + MGP_BALBcJ_P0094718 Uqcrc1 protein_coding protein_coding MGP_BALBcJ_T0094719.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106520129 106523584 + Uqcrc1 protein_coding retained_intron MGP_BALBcJ_T0094720.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106521381 106523505 + MGP_BALBcJ_P0094720 Uqcrc1 protein_coding protein_coding MGP_BALBcJ_T0094721.1 MGP_BALBcJ_G0035290.1 mouse_genomes_project 9 106522275 106523077 + Uqcrc1 protein_coding retained_intron MGP_BALBcJ_T0093258.1 MGP_BALBcJ_G0035016.1 mouse_genomes_project 9 72968655 72980724 + MGP_BALBcJ_P0093258 Lysmd2 protein_coding protein_coding MGP_BALBcJ_T0100176.1 MGP_BALBcJ_G0038212.1 mouse_genomes_project 9 32337820 32337982 + Gm25630 snRNA snRNA MGP_BALBcJ_T0000340.1 MGP_BALBcJ_G0000281.1 mouse_genomes_project 9 121227001 121227070 + mt-Ta Mt_tRNA Mt_tRNA MGP_BALBcJ_T0092994.1 MGP_BALBcJ_G0034963.1 mouse_genomes_project 9 65979405 65989684 + Rora protein_coding processed_transcript MGP_BALBcJ_T0092995.1 MGP_BALBcJ_G0034963.1 mouse_genomes_project 9 65979405 66723424 + MGP_BALBcJ_P0092995 Rora protein_coding protein_coding MGP_BALBcJ_T0092996.1 MGP_BALBcJ_G0034963.1 mouse_genomes_project 9 65979510 66699706 + MGP_BALBcJ_P0092996 Rora protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092997.1 MGP_BALBcJ_G0034963.1 mouse_genomes_project 9 65980922 65988898 + Rora protein_coding processed_transcript MGP_BALBcJ_T0092998.1 MGP_BALBcJ_G0034963.1 mouse_genomes_project 9 66529614 66585141 + Rora protein_coding processed_transcript MGP_BALBcJ_T0092999.1 MGP_BALBcJ_G0034963.1 mouse_genomes_project 9 66624434 66714980 + MGP_BALBcJ_P0092999 Rora protein_coding protein_coding MGP_BALBcJ_T0091255.1 MGP_BALBcJ_G0034339.1 mouse_genomes_project 9 12251858 12319634 - MGP_BALBcJ_P0091255 Ccdc67 protein_coding protein_coding MGP_BALBcJ_T0091256.1 MGP_BALBcJ_G0034339.1 mouse_genomes_project 9 12251864 12323082 - MGP_BALBcJ_P0091256 Ccdc67 protein_coding protein_coding MGP_BALBcJ_T0091257.1 MGP_BALBcJ_G0034339.1 mouse_genomes_project 9 12252552 12323052 - MGP_BALBcJ_P0091257 Ccdc67 protein_coding protein_coding MGP_BALBcJ_T0091258.1 MGP_BALBcJ_G0034339.1 mouse_genomes_project 9 12267405 12280284 - Ccdc67 protein_coding processed_transcript MGP_BALBcJ_T0091259.1 MGP_BALBcJ_G0034339.1 mouse_genomes_project 9 12276320 12323063 - MGP_BALBcJ_P0091259 Ccdc67 protein_coding protein_coding MGP_BALBcJ_T0016046.1 MGP_BALBcJ_G0014143.1 mouse_genomes_project 9 74143582 74144480 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091794.1 MGP_BALBcJ_G0034543.1 mouse_genomes_project 9 34640798 34641955 + MGP_BALBcJ_P0091794 protein_coding protein_coding MGP_BALBcJ_T0091072.1 MGP_BALBcJ_G0034277.1 mouse_genomes_project 9 98662 175537 + MGP_BALBcJ_P0091072 Cwf19l2 protein_coding protein_coding MGP_BALBcJ_T0093652.1 MGP_BALBcJ_G0035105.1 mouse_genomes_project 9 91970994 91991041 - MGP_BALBcJ_P0093652 1190002N15Rik protein_coding protein_coding MGP_BALBcJ_T0092041.1 MGP_BALBcJ_G0034682.1 mouse_genomes_project 9 41472335 41478971 - MGP_BALBcJ_P0092041 Foxr1 protein_coding protein_coding MGP_BALBcJ_T0092083.1 MGP_BALBcJ_G0034691.1 mouse_genomes_project 9 41844972 41850447 - Tmem25 protein_coding processed_transcript MGP_BALBcJ_T0092084.1 MGP_BALBcJ_G0034691.1 mouse_genomes_project 9 41844972 41850447 - MGP_BALBcJ_P0092084 Tmem25 protein_coding protein_coding MGP_BALBcJ_T0092085.1 MGP_BALBcJ_G0034691.1 mouse_genomes_project 9 41844972 41850512 - MGP_BALBcJ_P0092085 Tmem25 protein_coding protein_coding MGP_BALBcJ_T0100227.1 MGP_BALBcJ_G0038263.1 mouse_genomes_project 9 112558916 112559021 - Gm23232 snRNA snRNA MGP_BALBcJ_T0091286.1 MGP_BALBcJ_G0034353.1 mouse_genomes_project 9 15601198 15602146 + MGP_BALBcJ_P0091286 Olfr830 protein_coding protein_coding MGP_BALBcJ_T0091501.1 MGP_BALBcJ_G0034451.1 mouse_genomes_project 9 19015456 19033404 + MGP_BALBcJ_P0091501 Zfp809 protein_coding protein_coding MGP_BALBcJ_T0094197.1 MGP_BALBcJ_G0035216.1 mouse_genomes_project 9 104261649 104368971 - MGP_BALBcJ_P0094197 Rad54l2 protein_coding protein_coding MGP_BALBcJ_T0094198.1 MGP_BALBcJ_G0035216.1 mouse_genomes_project 9 104262356 104266864 - MGP_BALBcJ_P0094198 Rad54l2 protein_coding protein_coding MGP_BALBcJ_T0094199.1 MGP_BALBcJ_G0035216.1 mouse_genomes_project 9 104296316 104297254 - MGP_BALBcJ_P0094199 Rad54l2 protein_coding protein_coding MGP_BALBcJ_T0094200.1 MGP_BALBcJ_G0035216.1 mouse_genomes_project 9 104366539 104368953 - Rad54l2 protein_coding retained_intron MGP_BALBcJ_T0094449.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105568477 105575665 + MGP_BALBcJ_P0094449 Cdhr4 protein_coding protein_coding MGP_BALBcJ_T0094450.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571670 105574043 + MGP_BALBcJ_P0094450 Cdhr4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094451.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571706 105572555 + Cdhr4 protein_coding retained_intron MGP_BALBcJ_T0094452.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571712 105575653 + Cdhr4 protein_coding retained_intron MGP_BALBcJ_T0094453.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571736 105572339 + Cdhr4 protein_coding retained_intron MGP_BALBcJ_T0094454.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571743 105575656 + Cdhr4 protein_coding retained_intron MGP_BALBcJ_T0094455.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571763 105572911 + Cdhr4 protein_coding retained_intron MGP_BALBcJ_T0094456.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571886 105573643 + Cdhr4 protein_coding processed_transcript MGP_BALBcJ_T0094457.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571924 105575665 + MGP_BALBcJ_P0094457 Cdhr4 protein_coding protein_coding MGP_BALBcJ_T0094458.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105571978 105573138 + Cdhr4 protein_coding retained_intron MGP_BALBcJ_T0094460.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105572596 105575660 + MGP_BALBcJ_P0094460 Cdhr4 protein_coding protein_coding MGP_BALBcJ_T0094461.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105573352 105575661 + MGP_BALBcJ_P0094461 Cdhr4 protein_coding protein_coding MGP_BALBcJ_T0094462.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105573573 105575658 + MGP_BALBcJ_P0094462 Cdhr4 protein_coding protein_coding MGP_BALBcJ_T0094463.1 MGP_BALBcJ_G0035252.1 mouse_genomes_project 9 105573658 105575660 + MGP_BALBcJ_P0094463 Cdhr4 protein_coding protein_coding MGP_BALBcJ_T0005447.1 MGP_BALBcJ_G0004607.1 mouse_genomes_project 9 66812075 66814645 - Gm16144 antisense antisense MGP_BALBcJ_T0016121.1 MGP_BALBcJ_G0014218.1 mouse_genomes_project 9 105763127 105763650 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009227.1 MGP_BALBcJ_G0007414.1 mouse_genomes_project 9 55561373 55565053 + 1700072B07Rik lincRNA lincRNA MGP_BALBcJ_T0101508.1 MGP_BALBcJ_G0039544.1 mouse_genomes_project 9 117400382 117400511 - Gm22729 snoRNA snoRNA MGP_BALBcJ_T0092879.1 MGP_BALBcJ_G0034938.1 mouse_genomes_project 9 62934318 62955467 + Oaz2 protein_coding processed_transcript MGP_BALBcJ_T0092880.1 MGP_BALBcJ_G0034938.1 mouse_genomes_project 9 62936019 62954410 + Oaz2 protein_coding processed_transcript MGP_BALBcJ_T0092881.1 MGP_BALBcJ_G0034938.1 mouse_genomes_project 9 62942811 62955132 + Oaz2 protein_coding retained_intron MGP_BALBcJ_T0092882.1 MGP_BALBcJ_G0034938.1 mouse_genomes_project 9 62942818 62956922 + MGP_BALBcJ_P0092882 Oaz2 protein_coding protein_coding MGP_BALBcJ_T0092883.1 MGP_BALBcJ_G0034938.1 mouse_genomes_project 9 62942823 62955123 + MGP_BALBcJ_P0092883 Oaz2 protein_coding protein_coding MGP_BALBcJ_T0092884.1 MGP_BALBcJ_G0034938.1 mouse_genomes_project 9 62954390 62956208 + MGP_BALBcJ_P0092884 Oaz2 protein_coding protein_coding MGP_BALBcJ_T0092114.1 MGP_BALBcJ_G0034703.1 mouse_genomes_project 9 42176919 42189769 + MGP_BALBcJ_P0092114 Scn2b protein_coding protein_coding MGP_BALBcJ_T0092115.1 MGP_BALBcJ_G0034703.1 mouse_genomes_project 9 42176924 42189767 + MGP_BALBcJ_P0092115 Scn2b protein_coding protein_coding MGP_BALBcJ_T0009235.1 MGP_BALBcJ_G0007420.1 mouse_genomes_project 9 61287870 61292532 + 1110036E04Rik lincRNA lincRNA MGP_BALBcJ_T0095237.1 MGP_BALBcJ_G0035411.1 mouse_genomes_project 9 118417550 118591108 + MGP_BALBcJ_P0095237 Myrip protein_coding protein_coding MGP_BALBcJ_T0095238.1 MGP_BALBcJ_G0035411.1 mouse_genomes_project 9 118502459 118541813 + MGP_BALBcJ_P0095238 Myrip protein_coding protein_coding MGP_BALBcJ_T0095239.1 MGP_BALBcJ_G0035411.1 mouse_genomes_project 9 118526699 118534360 + Myrip protein_coding processed_transcript MGP_BALBcJ_T0095240.1 MGP_BALBcJ_G0035411.1 mouse_genomes_project 9 118544557 118549635 + Myrip protein_coding processed_transcript MGP_BALBcJ_T0092490.1 MGP_BALBcJ_G0034825.1 mouse_genomes_project 9 53997566 54000871 - MGP_BALBcJ_P0092490 Odf3l1 protein_coding protein_coding MGP_BALBcJ_T0094476.1 MGP_BALBcJ_G0035255.1 mouse_genomes_project 9 105650724 105654284 + MGP_BALBcJ_P0094476 Gmppb protein_coding protein_coding MGP_BALBcJ_T0094477.1 MGP_BALBcJ_G0035255.1 mouse_genomes_project 9 105650751 105651064 + Gmppb protein_coding processed_transcript MGP_BALBcJ_T0094478.1 MGP_BALBcJ_G0035255.1 mouse_genomes_project 9 105650771 105653399 + Gmppb protein_coding retained_intron MGP_BALBcJ_T0094479.1 MGP_BALBcJ_G0035255.1 mouse_genomes_project 9 105650807 105653185 + MGP_BALBcJ_P0094479 Gmppb protein_coding protein_coding MGP_BALBcJ_T0094480.1 MGP_BALBcJ_G0035255.1 mouse_genomes_project 9 105650937 105653002 + Gmppb protein_coding retained_intron MGP_BALBcJ_T0009221.1 MGP_BALBcJ_G0007408.1 mouse_genomes_project 9 50383184 50400396 + 4930510E17Rik lincRNA lincRNA MGP_BALBcJ_T0002460.1 MGP_BALBcJ_G0002369.1 mouse_genomes_project 9 107800580 107801520 + TEC TEC MGP_BALBcJ_T0002366.1 MGP_BALBcJ_G0002276.1 mouse_genomes_project 9 69695940 69696926 + TEC TEC MGP_BALBcJ_T0094804.1 MGP_BALBcJ_G0035312.1 mouse_genomes_project 9 107596429 107603368 + MGP_BALBcJ_P0094804 Spink8 protein_coding protein_coding MGP_BALBcJ_T0094805.1 MGP_BALBcJ_G0035312.1 mouse_genomes_project 9 107599319 107609388 + MGP_BALBcJ_P0094805 Spink8 protein_coding protein_coding MGP_BALBcJ_T0094806.1 MGP_BALBcJ_G0035312.1 mouse_genomes_project 9 107599402 107609383 + MGP_BALBcJ_P0094806 Spink8 protein_coding protein_coding MGP_BALBcJ_T0095310.1 MGP_BALBcJ_G0035429.1 mouse_genomes_project 9 119966956 119976389 - MGP_BALBcJ_P0095310 Higd1a protein_coding protein_coding MGP_BALBcJ_T0016119.1 MGP_BALBcJ_G0014216.1 mouse_genomes_project 9 104630840 104632043 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002361.1 MGP_BALBcJ_G0002271.1 mouse_genomes_project 9 69329457 69331883 - TEC TEC MGP_BALBcJ_T0093758.1 MGP_BALBcJ_G0035123.1 mouse_genomes_project 9 94555265 94591812 - MGP_BALBcJ_P0093758 Slc25a36 protein_coding protein_coding MGP_BALBcJ_T0093759.1 MGP_BALBcJ_G0035123.1 mouse_genomes_project 9 94560050 94569638 - Slc25a36 protein_coding processed_transcript MGP_BALBcJ_T0093760.1 MGP_BALBcJ_G0035123.1 mouse_genomes_project 9 94560216 94569755 - Slc25a36 protein_coding processed_transcript MGP_BALBcJ_T0093761.1 MGP_BALBcJ_G0035123.1 mouse_genomes_project 9 94569312 94579819 - MGP_BALBcJ_P0093761 Slc25a36 protein_coding protein_coding MGP_BALBcJ_T0093762.1 MGP_BALBcJ_G0035123.1 mouse_genomes_project 9 94572411 94591642 - Slc25a36 protein_coding retained_intron MGP_BALBcJ_T0093763.1 MGP_BALBcJ_G0035123.1 mouse_genomes_project 9 94578901 94591688 - Slc25a36 protein_coding retained_intron MGP_BALBcJ_T0094795.1 MGP_BALBcJ_G0035307.1 mouse_genomes_project 9 107033100 107206277 - MGP_BALBcJ_P0094795 protein_coding protein_coding MGP_BALBcJ_T0002440.1 MGP_BALBcJ_G0002349.1 mouse_genomes_project 9 101097440 101099582 - TEC TEC MGP_BALBcJ_T0005537.1 MGP_BALBcJ_G0004672.1 mouse_genomes_project 9 119058577 119064935 - 4930593C16Rik antisense antisense MGP_BALBcJ_T0002394.1 MGP_BALBcJ_G0002303.1 mouse_genomes_project 9 84143285 84145808 + TEC TEC MGP_BALBcJ_T0095347.1 MGP_BALBcJ_G0035446.1 mouse_genomes_project 9 121140959 121142960 + MGP_BALBcJ_P0095347 protein_coding protein_coding MGP_BALBcJ_T0091701.1 MGP_BALBcJ_G0034512.1 mouse_genomes_project 9 32603175 32604379 + MGP_BALBcJ_P0091701 Gm17677 protein_coding protein_coding MGP_BALBcJ_T0093580.1 MGP_BALBcJ_G0035091.1 mouse_genomes_project 9 87344974 87351136 + MGP_BALBcJ_P0093580 Rasgrf1 protein_coding protein_coding MGP_BALBcJ_T0093581.1 MGP_BALBcJ_G0035091.1 mouse_genomes_project 9 87344975 87351123 + MGP_BALBcJ_P0093581 Rasgrf1 protein_coding protein_coding MGP_BALBcJ_T0093582.1 MGP_BALBcJ_G0035091.1 mouse_genomes_project 9 87344975 87464768 + MGP_BALBcJ_P0093582 Rasgrf1 protein_coding protein_coding MGP_BALBcJ_T0093583.1 MGP_BALBcJ_G0035091.1 mouse_genomes_project 9 87344978 87362000 + Rasgrf1 protein_coding retained_intron MGP_BALBcJ_T0011075.1 MGP_BALBcJ_G0009200.1 mouse_genomes_project 9 106179991 106180111 - Gm24083 miRNA miRNA MGP_BALBcJ_T0101771.1 MGP_BALBcJ_G0039722.1 mouse_genomes_project 9 37467119 37467764 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101772.1 MGP_BALBcJ_G0039722.1 mouse_genomes_project 9 37467151 37467734 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0091853.1 MGP_BALBcJ_G0034595.1 mouse_genomes_project 9 36009663 36010599 - MGP_BALBcJ_P0091853 Olfr937 protein_coding protein_coding MGP_BALBcJ_T0002413.1 MGP_BALBcJ_G0002322.1 mouse_genomes_project 9 93688235 93691253 + TEC TEC MGP_BALBcJ_T0016067.1 MGP_BALBcJ_G0014164.1 mouse_genomes_project 9 84809849 84810327 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092227.1 MGP_BALBcJ_G0034738.1 mouse_genomes_project 9 46003478 46015464 - MGP_BALBcJ_P0092227 Htr3a protein_coding unknown_likely_coding MGP_BALBcJ_T0092228.1 MGP_BALBcJ_G0034738.1 mouse_genomes_project 9 46003485 46015598 - MGP_BALBcJ_P0092228 Htr3a protein_coding protein_coding MGP_BALBcJ_T0091182.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10451546 10470746 - MGP_BALBcJ_P0091182 Cep57 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091183.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10451549 10470807 - MGP_BALBcJ_P0091183 Cep57 protein_coding protein_coding MGP_BALBcJ_T0091184.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10451579 10470710 - MGP_BALBcJ_P0091184 Cep57 protein_coding protein_coding MGP_BALBcJ_T0091185.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10452303 10470780 - MGP_BALBcJ_P0091185 Cep57 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091186.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10452361 10470655 - MGP_BALBcJ_P0091186 Cep57 protein_coding protein_coding MGP_BALBcJ_T0091187.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10452501 10454169 - Cep57 protein_coding retained_intron MGP_BALBcJ_T0091188.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10452570 10462420 - MGP_BALBcJ_P0091188 Cep57 protein_coding protein_coding MGP_BALBcJ_T0091189.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10454474 10462664 - MGP_BALBcJ_P0091189 Cep57 protein_coding protein_coding MGP_BALBcJ_T0091190.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10456810 10462700 - Cep57 protein_coding retained_intron MGP_BALBcJ_T0091191.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10457186 10470808 - MGP_BALBcJ_P0091191 Cep57 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091192.1 MGP_BALBcJ_G0034317.1 mouse_genomes_project 9 10457201 10460152 - Cep57 protein_coding retained_intron MGP_BALBcJ_T0091497.1 MGP_BALBcJ_G0034449.1 mouse_genomes_project 9 18943261 18944774 + MGP_BALBcJ_P0091497 Pigyl protein_coding protein_coding MGP_BALBcJ_T0091498.1 MGP_BALBcJ_G0034449.1 mouse_genomes_project 9 18943361 18944741 + MGP_BALBcJ_P0091498 Pigyl protein_coding protein_coding MGP_BALBcJ_T0095348.1 MGP_BALBcJ_G0035447.1 mouse_genomes_project 9 121154246 121155339 + Tgm4 protein_coding processed_transcript MGP_BALBcJ_T0095349.1 MGP_BALBcJ_G0035447.1 mouse_genomes_project 9 121154248 121171157 + Tgm4 protein_coding processed_transcript MGP_BALBcJ_T0095350.1 MGP_BALBcJ_G0035447.1 mouse_genomes_project 9 121154248 121187243 + MGP_BALBcJ_P0095350 Tgm4 protein_coding protein_coding MGP_BALBcJ_T0095351.1 MGP_BALBcJ_G0035447.1 mouse_genomes_project 9 121159947 121168743 + Tgm4 protein_coding retained_intron MGP_BALBcJ_T0093335.1 MGP_BALBcJ_G0035036.1 mouse_genomes_project 9 75812220 75814843 - MGP_BALBcJ_P0093335 Ooep protein_coding protein_coding MGP_BALBcJ_T0092349.1 MGP_BALBcJ_G0034776.1 mouse_genomes_project 9 49083765 49104000 - MGP_BALBcJ_P0092349 Fdx1 protein_coding protein_coding MGP_BALBcJ_T0093041.1 MGP_BALBcJ_G0034970.1 mouse_genomes_project 9 67430882 67486381 - MGP_BALBcJ_P0093041 Fam81a protein_coding protein_coding MGP_BALBcJ_T0093042.1 MGP_BALBcJ_G0034970.1 mouse_genomes_project 9 67443936 67444463 - Fam81a protein_coding retained_intron MGP_BALBcJ_T0093043.1 MGP_BALBcJ_G0034970.1 mouse_genomes_project 9 67469755 67486606 - MGP_BALBcJ_P0093043 Fam81a protein_coding protein_coding MGP_BALBcJ_T0093044.1 MGP_BALBcJ_G0034970.1 mouse_genomes_project 9 67469786 67487315 - MGP_BALBcJ_P0093044 Fam81a protein_coding protein_coding MGP_BALBcJ_T0101492.1 MGP_BALBcJ_G0039528.1 mouse_genomes_project 9 93087265 93087375 + Gm25582 snoRNA snoRNA MGP_BALBcJ_T0094940.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108465958 108521003 + MGP_BALBcJ_P0094940 Ccdc12 protein_coding protein_coding MGP_BALBcJ_T0094941.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108465980 108467134 + Ccdc12 protein_coding retained_intron MGP_BALBcJ_T0094942.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108465985 108510241 + Ccdc12 protein_coding retained_intron MGP_BALBcJ_T0094943.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108465993 108520652 + MGP_BALBcJ_P0094943 Ccdc12 protein_coding protein_coding MGP_BALBcJ_T0094944.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108465997 108518134 + Ccdc12 protein_coding retained_intron MGP_BALBcJ_T0094945.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108466067 108520910 + Ccdc12 protein_coding processed_transcript MGP_BALBcJ_T0094946.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108476748 108520682 + Ccdc12 protein_coding processed_transcript MGP_BALBcJ_T0094947.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108519290 108520984 + MGP_BALBcJ_P0094947 Ccdc12 protein_coding protein_coding MGP_BALBcJ_T0094948.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108519407 108520990 + Ccdc12 protein_coding retained_intron MGP_BALBcJ_T0094949.1 MGP_BALBcJ_G0035329.1 mouse_genomes_project 9 108519440 108520861 + Ccdc12 protein_coding retained_intron MGP_BALBcJ_T0016115.1 MGP_BALBcJ_G0014212.1 mouse_genomes_project 9 101735889 101736502 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005403.1 MGP_BALBcJ_G0004578.1 mouse_genomes_project 9 29374640 29383221 + Gm27201 antisense antisense MGP_BALBcJ_T0092774.1 MGP_BALBcJ_G0034905.1 mouse_genomes_project 9 60881622 60992932 - MGP_BALBcJ_P0092774 Smad3 protein_coding protein_coding MGP_BALBcJ_T0092775.1 MGP_BALBcJ_G0034905.1 mouse_genomes_project 9 60889626 60901403 - MGP_BALBcJ_P0092775 Smad3 protein_coding protein_coding MGP_BALBcJ_T0092776.1 MGP_BALBcJ_G0034905.1 mouse_genomes_project 9 60889654 60947079 - MGP_BALBcJ_P0092776 Smad3 protein_coding protein_coding MGP_BALBcJ_T0092777.1 MGP_BALBcJ_G0034905.1 mouse_genomes_project 9 60901003 60986015 - MGP_BALBcJ_P0092777 Smad3 protein_coding protein_coding MGP_BALBcJ_T0092778.1 MGP_BALBcJ_G0034905.1 mouse_genomes_project 9 60902668 60978242 - Smad3 protein_coding processed_transcript MGP_BALBcJ_T0016128.1 MGP_BALBcJ_G0014225.1 mouse_genomes_project 9 115099039 115099589 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094429.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105549952 105550519 + Uba7 protein_coding processed_transcript MGP_BALBcJ_T0094430.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105549981 105558504 + MGP_BALBcJ_P0094430 Uba7 protein_coding protein_coding MGP_BALBcJ_T0094431.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550017 105558504 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094432.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550022 105558504 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094433.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550029 105554943 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094434.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550053 105550598 + Uba7 protein_coding processed_transcript MGP_BALBcJ_T0094435.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550053 105558504 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094436.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550102 105558506 + MGP_BALBcJ_P0094436 Uba7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094437.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550403 105558508 + MGP_BALBcJ_P0094437 Uba7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094438.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105550755 105551414 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094439.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105551338 105551972 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094440.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105554186 105557233 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094441.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105555337 105557647 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094442.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105557472 105558501 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094443.1 MGP_BALBcJ_G0035249.1 mouse_genomes_project 9 105557482 105558399 + Uba7 protein_coding retained_intron MGP_BALBcJ_T0094613.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106126776 106144796 + MGP_BALBcJ_P0094613 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094614.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127057 106139775 + MGP_BALBcJ_P0094614 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094615.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127073 106128589 + Qrich1 protein_coding processed_transcript MGP_BALBcJ_T0094616.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127073 106156056 + MGP_BALBcJ_P0094616 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094617.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127080 106171680 + MGP_BALBcJ_P0094617 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094618.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127084 106171850 + MGP_BALBcJ_P0094618 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094619.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127122 106139761 + MGP_BALBcJ_P0094619 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094620.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127125 106139801 + MGP_BALBcJ_P0094620 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094621.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127126 106155825 + MGP_BALBcJ_P0094621 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094622.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127397 106141529 + Qrich1 protein_coding retained_intron MGP_BALBcJ_T0094623.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106127421 106139797 + MGP_BALBcJ_P0094623 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094624.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106139313 106144546 + MGP_BALBcJ_P0094624 Qrich1 protein_coding protein_coding MGP_BALBcJ_T0094625.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106167817 106171256 + Qrich1 protein_coding retained_intron MGP_BALBcJ_T0094626.1 MGP_BALBcJ_G0035276.1 mouse_genomes_project 9 106168155 106171087 + Qrich1 protein_coding retained_intron MGP_BALBcJ_T0005522.1 MGP_BALBcJ_G0004660.1 mouse_genomes_project 9 106667748 106671709 - Gm7628 antisense antisense MGP_BALBcJ_T0094353.1 MGP_BALBcJ_G0035240.1 mouse_genomes_project 9 105241355 105246383 - MGP_BALBcJ_P0094353 Gnat1 protein_coding protein_coding MGP_BALBcJ_T0094354.1 MGP_BALBcJ_G0035240.1 mouse_genomes_project 9 105241358 105246305 - Gnat1 protein_coding retained_intron MGP_BALBcJ_T0094355.1 MGP_BALBcJ_G0035240.1 mouse_genomes_project 9 105242178 105243323 - Gnat1 protein_coding retained_intron MGP_BALBcJ_T0094356.1 MGP_BALBcJ_G0035240.1 mouse_genomes_project 9 105243126 105245095 - Gnat1 protein_coding processed_transcript MGP_BALBcJ_T0094357.1 MGP_BALBcJ_G0035240.1 mouse_genomes_project 9 105243812 105246285 - Gnat1 protein_coding retained_intron MGP_BALBcJ_T0018471.1 MGP_BALBcJ_G0015672.1 mouse_genomes_project 9 37291048 37311169 + 1700110K17Rik processed_transcript processed_transcript MGP_BALBcJ_T0018472.1 MGP_BALBcJ_G0015672.1 mouse_genomes_project 9 37301085 37311163 + 1700110K17Rik processed_transcript processed_transcript MGP_BALBcJ_T0009215.1 MGP_BALBcJ_G0007404.1 mouse_genomes_project 9 42477915 42492083 - 4833428L15Rik lincRNA lincRNA MGP_BALBcJ_T0005419.1 MGP_BALBcJ_G0004591.1 mouse_genomes_project 9 48425665 48431361 + 2010007H06Rik antisense antisense MGP_BALBcJ_T0005420.1 MGP_BALBcJ_G0004591.1 mouse_genomes_project 9 48427447 48428073 + 2010007H06Rik antisense antisense MGP_BALBcJ_T0093461.1 MGP_BALBcJ_G0035062.1 mouse_genomes_project 9 83264000 83268651 + MGP_BALBcJ_P0093461 Tpbg protein_coding protein_coding MGP_BALBcJ_T0093462.1 MGP_BALBcJ_G0035062.1 mouse_genomes_project 9 83264485 83268651 + MGP_BALBcJ_P0093462 Tpbg protein_coding protein_coding MGP_BALBcJ_T0093463.1 MGP_BALBcJ_G0035062.1 mouse_genomes_project 9 83264988 83265550 + Tpbg protein_coding processed_transcript MGP_BALBcJ_T0000338.1 MGP_BALBcJ_G0000279.1 mouse_genomes_project 9 121226830 121226897 + mt-Tc Mt_tRNA Mt_tRNA MGP_BALBcJ_T0011729.1 MGP_BALBcJ_G0009854.1 mouse_genomes_project 9 111278693 111278990 + Gm22492 misc_RNA misc_RNA MGP_BALBcJ_T0095371.1 MGP_BALBcJ_G0035453.1 mouse_genomes_project 9 121492644 121603288 + MGP_BALBcJ_P0095371 Lars2 protein_coding protein_coding MGP_BALBcJ_T0092210.1 MGP_BALBcJ_G0034729.1 mouse_genomes_project 9 45412695 45435701 - MGP_BALBcJ_P0092210 Nxpe2 protein_coding protein_coding MGP_BALBcJ_T0092211.1 MGP_BALBcJ_G0034729.1 mouse_genomes_project 9 45413833 45435637 - MGP_BALBcJ_P0092211 Nxpe2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092212.1 MGP_BALBcJ_G0034729.1 mouse_genomes_project 9 45421250 45448254 - MGP_BALBcJ_P0092212 Nxpe2 protein_coding protein_coding MGP_BALBcJ_T0092213.1 MGP_BALBcJ_G0034729.1 mouse_genomes_project 9 45426008 45435657 - Nxpe2 protein_coding processed_transcript MGP_BALBcJ_T0092214.1 MGP_BALBcJ_G0034729.1 mouse_genomes_project 9 45426336 45448254 - Nxpe2 protein_coding processed_transcript MGP_BALBcJ_T0093336.1 MGP_BALBcJ_G0035037.1 mouse_genomes_project 9 75832844 75860545 + MGP_BALBcJ_P0093336 Ddx43 protein_coding protein_coding MGP_BALBcJ_T0095372.1 MGP_BALBcJ_G0035454.1 mouse_genomes_project 9 121619285 121663432 + MGP_BALBcJ_P0095372 Limd1 protein_coding protein_coding MGP_BALBcJ_T0092496.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54231105 54248562 + MGP_BALBcJ_P0092496 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092497.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54234403 54287444 + MGP_BALBcJ_P0092497 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092498.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54235441 54287442 + MGP_BALBcJ_P0092498 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092499.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54235464 54287444 + MGP_BALBcJ_P0092499 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092500.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54235693 54254468 + MGP_BALBcJ_P0092500 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092501.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54240223 54287444 + MGP_BALBcJ_P0092501 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092502.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54245646 54287444 + MGP_BALBcJ_P0092502 Sin3a protein_coding protein_coding MGP_BALBcJ_T0092503.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54254312 54256959 + Sin3a protein_coding retained_intron MGP_BALBcJ_T0092504.1 MGP_BALBcJ_G0034831.1 mouse_genomes_project 9 54272186 54284269 + Sin3a protein_coding retained_intron MGP_BALBcJ_T0094233.1 MGP_BALBcJ_G0035222.1 mouse_genomes_project 9 104860895 104866829 + MGP_BALBcJ_P0094233 Cish protein_coding protein_coding MGP_BALBcJ_T0094234.1 MGP_BALBcJ_G0035222.1 mouse_genomes_project 9 104861579 104867627 + MGP_BALBcJ_P0094234 Cish protein_coding protein_coding MGP_BALBcJ_T0094235.1 MGP_BALBcJ_G0035222.1 mouse_genomes_project 9 104861776 104866785 + Cish protein_coding processed_transcript MGP_BALBcJ_T0094236.1 MGP_BALBcJ_G0035222.1 mouse_genomes_project 9 104861781 104865393 + MGP_BALBcJ_P0094236 Cish protein_coding protein_coding MGP_BALBcJ_T0094237.1 MGP_BALBcJ_G0035222.1 mouse_genomes_project 9 104863997 104865300 + Cish protein_coding processed_transcript MGP_BALBcJ_T0091590.1 MGP_BALBcJ_G0034481.1 mouse_genomes_project 9 27283293 27322743 + MGP_BALBcJ_P0091590 Snx19 protein_coding protein_coding MGP_BALBcJ_T0094789.1 MGP_BALBcJ_G0035304.1 mouse_genomes_project 9 106801204 107425287 - MGP_BALBcJ_P0094789 Fbxw16 protein_coding protein_coding MGP_BALBcJ_T0018475.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38363714 38578749 + processed_transcript lincRNA MGP_BALBcJ_T0018476.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38363843 38483618 + processed_transcript lincRNA MGP_BALBcJ_T0018477.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38363878 38425932 + processed_transcript lincRNA MGP_BALBcJ_T0018478.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38470051 38579206 + processed_transcript lincRNA MGP_BALBcJ_T0018479.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38470159 38603836 + processed_transcript lincRNA MGP_BALBcJ_T0018480.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38568341 38581558 + processed_transcript lincRNA MGP_BALBcJ_T0018481.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38568822 38581561 + processed_transcript lincRNA MGP_BALBcJ_T0018482.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38569591 38581559 + processed_transcript processed_transcript MGP_BALBcJ_T0018483.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38570102 38601416 + processed_transcript lincRNA MGP_BALBcJ_T0018484.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38570116 38603640 + processed_transcript lincRNA MGP_BALBcJ_T0018485.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38570188 38581218 + processed_transcript lincRNA MGP_BALBcJ_T0018486.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38577225 38581469 + processed_transcript retained_intron MGP_BALBcJ_T0018487.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38589144 38601382 + processed_transcript lincRNA MGP_BALBcJ_T0018488.1 MGP_BALBcJ_G0015674.1 mouse_genomes_project 9 38602887 38606421 + processed_transcript retained_intron MGP_BALBcJ_T0009255.1 MGP_BALBcJ_G0007436.1 mouse_genomes_project 9 75583974 75586931 + C920006O11Rik lincRNA lincRNA MGP_BALBcJ_T0091265.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15041220 15121249 - MGP_BALBcJ_P0091265 Naalad2 protein_coding protein_coding MGP_BALBcJ_T0091266.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15042289 15108037 - MGP_BALBcJ_P0091266 Naalad2 protein_coding protein_coding MGP_BALBcJ_T0091267.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15042290 15113701 - MGP_BALBcJ_P0091267 Naalad2 protein_coding protein_coding MGP_BALBcJ_T0091268.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15102775 15107923 - Naalad2 protein_coding retained_intron MGP_BALBcJ_T0091269.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15107058 15126683 - MGP_BALBcJ_P0091269 Naalad2 protein_coding protein_coding MGP_BALBcJ_T0091270.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15107829 15126685 - MGP_BALBcJ_P0091270 Naalad2 protein_coding protein_coding MGP_BALBcJ_T0091271.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15110072 15126706 - MGP_BALBcJ_P0091271 Naalad2 protein_coding protein_coding MGP_BALBcJ_T0091272.1 MGP_BALBcJ_G0034344.1 mouse_genomes_project 9 15110178 15126687 - Naalad2 protein_coding processed_transcript MGP_BALBcJ_T0011080.1 MGP_BALBcJ_G0009205.1 mouse_genomes_project 9 107679201 107679269 + Mir7089 miRNA miRNA MGP_BALBcJ_T0016044.1 MGP_BALBcJ_G0014141.1 mouse_genomes_project 9 74034155 74034909 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018543.1 MGP_BALBcJ_G0015697.1 mouse_genomes_project 9 105653157 105660075 + Gm20529 processed_transcript processed_transcript MGP_BALBcJ_T0016058.1 MGP_BALBcJ_G0014155.1 mouse_genomes_project 9 79591568 79592319 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092250.1 MGP_BALBcJ_G0034749.1 mouse_genomes_project 9 47600997 47611686 + MGP_BALBcJ_P0092250 Plet1 protein_coding protein_coding MGP_BALBcJ_T0092251.1 MGP_BALBcJ_G0034749.1 mouse_genomes_project 9 47600999 47608193 + MGP_BALBcJ_P0092251 Plet1 protein_coding protein_coding MGP_BALBcJ_T0091405.1 MGP_BALBcJ_G0034414.1 mouse_genomes_project 9 18020769 18026143 - MGP_BALBcJ_P0091405 S1pr5 protein_coding protein_coding MGP_BALBcJ_T0100193.1 MGP_BALBcJ_G0038229.1 mouse_genomes_project 9 62454337 62454453 - Rnu5g snRNA snRNA MGP_BALBcJ_T0093340.1 MGP_BALBcJ_G0035040.1 mouse_genomes_project 9 75888930 75916149 + MGP_BALBcJ_P0093340 Mto1 protein_coding protein_coding MGP_BALBcJ_T0093341.1 MGP_BALBcJ_G0035040.1 mouse_genomes_project 9 75888930 75916149 + MGP_BALBcJ_P0093341 Mto1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093342.1 MGP_BALBcJ_G0035040.1 mouse_genomes_project 9 75888935 75892153 + Mto1 protein_coding retained_intron MGP_BALBcJ_T0093343.1 MGP_BALBcJ_G0035040.1 mouse_genomes_project 9 75906832 75912837 + Mto1 protein_coding retained_intron MGP_BALBcJ_T0093344.1 MGP_BALBcJ_G0035040.1 mouse_genomes_project 9 75907125 75917345 + MGP_BALBcJ_P0093344 Mto1 protein_coding protein_coding MGP_BALBcJ_T0093345.1 MGP_BALBcJ_G0035040.1 mouse_genomes_project 9 75912488 75915830 + Mto1 protein_coding retained_intron MGP_BALBcJ_T0011727.1 MGP_BALBcJ_G0009852.1 mouse_genomes_project 9 107905212 107905340 - Gm27855 misc_RNA misc_RNA MGP_BALBcJ_T0091948.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39404877 39464814 - MGP_BALBcJ_P0091948 Tbcel protein_coding protein_coding MGP_BALBcJ_T0091949.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39404877 39450198 - MGP_BALBcJ_P0091949 Tbcel protein_coding protein_coding MGP_BALBcJ_T0091950.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39406013 39454058 - MGP_BALBcJ_P0091950 Tbcel protein_coding protein_coding MGP_BALBcJ_T0091951.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39406586 39420843 - Tbcel protein_coding processed_transcript MGP_BALBcJ_T0091952.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39408271 39464821 - MGP_BALBcJ_P0091952 Tbcel protein_coding protein_coding MGP_BALBcJ_T0091953.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39408385 39464774 - MGP_BALBcJ_P0091953 Tbcel protein_coding protein_coding MGP_BALBcJ_T0091954.1 MGP_BALBcJ_G0034649.1 mouse_genomes_project 9 39442601 39500501 - MGP_BALBcJ_P0091954 Tbcel protein_coding protein_coding MGP_BALBcJ_T0016096.1 MGP_BALBcJ_G0014193.1 mouse_genomes_project 9 94281347 94281615 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094989.1 MGP_BALBcJ_G0035343.1 mouse_genomes_project 9 108804286 108808734 - MGP_BALBcJ_P0094989 Rtp3 protein_coding protein_coding MGP_BALBcJ_T0094990.1 MGP_BALBcJ_G0035343.1 mouse_genomes_project 9 108806395 108809604 - MGP_BALBcJ_P0094990 Rtp3 protein_coding protein_coding MGP_BALBcJ_T0016110.1 MGP_BALBcJ_G0014207.1 mouse_genomes_project 9 98973272 98974127 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005454.1 MGP_BALBcJ_G0004612.1 mouse_genomes_project 9 69963822 69964650 - Gm27232 antisense antisense MGP_BALBcJ_T0098678.1 MGP_BALBcJ_G0036732.1 mouse_genomes_project 9 94022559 94022675 - n-R5s87 rRNA rRNA MGP_BALBcJ_T0093199.1 MGP_BALBcJ_G0035000.1 mouse_genomes_project 9 70455045 70470504 + MGP_BALBcJ_P0093199 Gm20509 protein_coding protein_coding MGP_BALBcJ_T0093569.1 MGP_BALBcJ_G0035086.1 mouse_genomes_project 9 86640566 86641415 + MGP_BALBcJ_P0093569 protein_coding protein_coding MGP_BALBcJ_T0101475.1 MGP_BALBcJ_G0039511.1 mouse_genomes_project 9 62131944 62132086 - Gm24347 snoRNA snoRNA MGP_BALBcJ_T0091292.1 MGP_BALBcJ_G0034359.1 mouse_genomes_project 9 15985219 15986326 - MGP_BALBcJ_P0091292 Olfr843 protein_coding protein_coding MGP_BALBcJ_T0016086.1 MGP_BALBcJ_G0014183.1 mouse_genomes_project 9 90846812 90847815 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091867.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36556400 36573235 - MGP_BALBcJ_P0091867 AW551984 protein_coding protein_coding MGP_BALBcJ_T0091868.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36556514 36572797 - MGP_BALBcJ_P0091868 AW551984 protein_coding protein_coding MGP_BALBcJ_T0091869.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36557966 36559987 - AW551984 protein_coding retained_intron MGP_BALBcJ_T0091870.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36559592 36561237 - AW551984 protein_coding retained_intron MGP_BALBcJ_T0091871.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36568768 36573514 - MGP_BALBcJ_P0091871 AW551984 protein_coding protein_coding MGP_BALBcJ_T0091872.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36569405 36572737 - AW551984 protein_coding retained_intron MGP_BALBcJ_T0091873.1 MGP_BALBcJ_G0034609.1 mouse_genomes_project 9 36569666 36572487 - MGP_BALBcJ_P0091873 AW551984 protein_coding protein_coding MGP_BALBcJ_T0101467.1 MGP_BALBcJ_G0039503.1 mouse_genomes_project 9 49433894 49434027 + Gm25562 snoRNA snoRNA MGP_BALBcJ_T0091386.1 MGP_BALBcJ_G0034405.1 mouse_genomes_project 9 17802596 17803755 + MGP_BALBcJ_P0091386 Icam4 protein_coding protein_coding MGP_BALBcJ_T0005496.1 MGP_BALBcJ_G0004641.1 mouse_genomes_project 9 102907731 102914665 + antisense antisense MGP_BALBcJ_T0093701.1 MGP_BALBcJ_G0035115.1 mouse_genomes_project 9 93583756 93649534 + MGP_BALBcJ_P0093701 Gk5 protein_coding protein_coding MGP_BALBcJ_T0093702.1 MGP_BALBcJ_G0035115.1 mouse_genomes_project 9 93583769 93653952 + MGP_BALBcJ_P0093702 Gk5 protein_coding protein_coding MGP_BALBcJ_T0093703.1 MGP_BALBcJ_G0035115.1 mouse_genomes_project 9 93583826 93652154 + MGP_BALBcJ_P0093703 Gk5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093704.1 MGP_BALBcJ_G0035115.1 mouse_genomes_project 9 93588678 93605990 + Gk5 protein_coding processed_transcript MGP_BALBcJ_T0093705.1 MGP_BALBcJ_G0035115.1 mouse_genomes_project 9 93640256 93642805 + Gk5 protein_coding retained_intron MGP_BALBcJ_T0002463.1 MGP_BALBcJ_G0002372.1 mouse_genomes_project 9 108174669 108178050 - TEC TEC MGP_BALBcJ_T0011085.1 MGP_BALBcJ_G0009210.1 mouse_genomes_project 9 113349934 113350057 + Mir467h miRNA miRNA MGP_BALBcJ_T0100214.1 MGP_BALBcJ_G0038250.1 mouse_genomes_project 9 87796362 87796539 + Gm22866 snRNA snRNA MGP_BALBcJ_T0094521.1 MGP_BALBcJ_G0035262.1 mouse_genomes_project 9 105897122 105902983 + MGP_BALBcJ_P0094521 Nicn1 protein_coding protein_coding MGP_BALBcJ_T0094522.1 MGP_BALBcJ_G0035262.1 mouse_genomes_project 9 105897137 105900029 + Nicn1 protein_coding retained_intron MGP_BALBcJ_T0094523.1 MGP_BALBcJ_G0035262.1 mouse_genomes_project 9 105897148 105899997 + Nicn1 protein_coding processed_transcript MGP_BALBcJ_T0094524.1 MGP_BALBcJ_G0035262.1 mouse_genomes_project 9 105900339 105901265 + Nicn1 protein_coding retained_intron MGP_BALBcJ_T0093053.1 MGP_BALBcJ_G0034977.1 mouse_genomes_project 9 68026715 68126915 + MGP_BALBcJ_P0093053 Adam10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093054.1 MGP_BALBcJ_G0034977.1 mouse_genomes_project 9 68026715 68128762 + MGP_BALBcJ_P0093054 Adam10 protein_coding protein_coding MGP_BALBcJ_T0093055.1 MGP_BALBcJ_G0034977.1 mouse_genomes_project 9 68026734 68096132 + MGP_BALBcJ_P0093055 Adam10 protein_coding protein_coding MGP_BALBcJ_T0093056.1 MGP_BALBcJ_G0034977.1 mouse_genomes_project 9 68124586 68126911 + Adam10 protein_coding retained_intron MGP_BALBcJ_T0093339.1 MGP_BALBcJ_G0035039.1 mouse_genomes_project 9 75888587 75889509 - MGP_BALBcJ_P0093339 Gm17324 protein_coding protein_coding MGP_BALBcJ_T0091898.1 MGP_BALBcJ_G0034634.1 mouse_genomes_project 9 37116939 37119693 + MGP_BALBcJ_P0091898 Tmem225 protein_coding protein_coding MGP_BALBcJ_T0011057.1 MGP_BALBcJ_G0009182.1 mouse_genomes_project 9 65054031 65054110 - Mir7242 miRNA miRNA MGP_BALBcJ_T0002369.1 MGP_BALBcJ_G0002279.1 mouse_genomes_project 9 69940167 69942248 + TEC TEC MGP_BALBcJ_T0092616.1 MGP_BALBcJ_G0034864.1 mouse_genomes_project 9 55679690 55690805 + MGP_BALBcJ_P0092616 6030419C18Rik protein_coding protein_coding MGP_BALBcJ_T0011059.1 MGP_BALBcJ_G0009184.1 mouse_genomes_project 9 67752830 67752890 - Mir5626 miRNA miRNA MGP_BALBcJ_T0094499.1 MGP_BALBcJ_G0035258.1 mouse_genomes_project 9 105682693 105687261 + MGP_BALBcJ_P0094499 Mst1 protein_coding protein_coding MGP_BALBcJ_T0094500.1 MGP_BALBcJ_G0035258.1 mouse_genomes_project 9 105682711 105687253 + MGP_BALBcJ_P0094500 Mst1 protein_coding protein_coding MGP_BALBcJ_T0094501.1 MGP_BALBcJ_G0035258.1 mouse_genomes_project 9 105682740 105684572 + MGP_BALBcJ_P0094501 Mst1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094502.1 MGP_BALBcJ_G0035258.1 mouse_genomes_project 9 105683658 105687193 + MGP_BALBcJ_P0094502 Mst1 protein_coding unknown_likely_coding MGP_BALBcJ_T0094503.1 MGP_BALBcJ_G0035258.1 mouse_genomes_project 9 105686562 105687256 + MGP_BALBcJ_P0094503 Mst1 protein_coding protein_coding MGP_BALBcJ_T0091327.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17236147 17246390 - MGP_BALBcJ_P0091327 Zfp426 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091328.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17236306 17260855 - MGP_BALBcJ_P0091328 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0091329.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17236518 17260857 - MGP_BALBcJ_P0091329 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0091330.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17237424 17260855 - MGP_BALBcJ_P0091330 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0091331.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17238583 17241061 - Zfp426 protein_coding retained_intron MGP_BALBcJ_T0091332.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17238729 17260844 - MGP_BALBcJ_P0091332 Zfp426 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091333.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17238774 17258918 - MGP_BALBcJ_P0091333 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0091334.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17240703 17246374 - MGP_BALBcJ_P0091334 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0091335.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17242534 17260814 - MGP_BALBcJ_P0091335 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0091336.1 MGP_BALBcJ_G0034388.1 mouse_genomes_project 9 17244549 17260824 - MGP_BALBcJ_P0091336 Zfp426 protein_coding protein_coding MGP_BALBcJ_T0092117.1 MGP_BALBcJ_G0034705.1 mouse_genomes_project 9 42231290 42262623 - MGP_BALBcJ_P0092117 Tmprss4 protein_coding protein_coding MGP_BALBcJ_T0092118.1 MGP_BALBcJ_G0034705.1 mouse_genomes_project 9 42231291 42262621 - MGP_BALBcJ_P0092118 Tmprss4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092119.1 MGP_BALBcJ_G0034705.1 mouse_genomes_project 9 42231869 42262591 - Tmprss4 protein_coding processed_transcript MGP_BALBcJ_T0092120.1 MGP_BALBcJ_G0034705.1 mouse_genomes_project 9 42231869 42262507 - MGP_BALBcJ_P0092120 Tmprss4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092121.1 MGP_BALBcJ_G0034705.1 mouse_genomes_project 9 42233361 42239233 - Tmprss4 protein_coding retained_intron MGP_BALBcJ_T0002407.1 MGP_BALBcJ_G0002316.1 mouse_genomes_project 9 88779941 88780681 - TEC TEC MGP_BALBcJ_T0002437.1 MGP_BALBcJ_G0002346.1 mouse_genomes_project 9 100669760 100672234 + TEC TEC MGP_BALBcJ_T0094121.1 MGP_BALBcJ_G0035201.1 mouse_genomes_project 9 104011691 104013519 + MGP_BALBcJ_P0094121 Gm10709 protein_coding protein_coding MGP_BALBcJ_T0091897.1 MGP_BALBcJ_G0034633.1 mouse_genomes_project 9 37093277 37094393 - MGP_BALBcJ_P0091897 Olfr985 protein_coding protein_coding MGP_BALBcJ_T0094903.1 MGP_BALBcJ_G0035323.1 mouse_genomes_project 9 108225275 108228559 + MGP_BALBcJ_P0094903 Ngp protein_coding protein_coding MGP_BALBcJ_T0093879.1 MGP_BALBcJ_G0035155.1 mouse_genomes_project 9 98607468 98635565 + MGP_BALBcJ_P0093879 Msl2 protein_coding protein_coding MGP_BALBcJ_T0093880.1 MGP_BALBcJ_G0035155.1 mouse_genomes_project 9 98608133 98637883 + MGP_BALBcJ_P0093880 Msl2 protein_coding protein_coding MGP_BALBcJ_T0091891.1 MGP_BALBcJ_G0034627.1 mouse_genomes_project 9 36974014 36975059 - MGP_BALBcJ_P0091891 Olfr979 protein_coding protein_coding MGP_BALBcJ_T0101769.1 MGP_BALBcJ_G0039721.1 mouse_genomes_project 9 37024454 37025213 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101770.1 MGP_BALBcJ_G0039721.1 mouse_genomes_project 9 37024644 37027134 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0091502.1 MGP_BALBcJ_G0034452.1 mouse_genomes_project 9 19037630 19050182 - MGP_BALBcJ_P0091502 Zfp599 protein_coding protein_coding MGP_BALBcJ_T0016090.1 MGP_BALBcJ_G0014187.1 mouse_genomes_project 9 92881456 92882180 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091883.1 MGP_BALBcJ_G0034619.1 mouse_genomes_project 9 36818638 36819411 + MGP_BALBcJ_P0091883 protein_coding protein_coding MGP_BALBcJ_T0011035.1 MGP_BALBcJ_G0009160.1 mouse_genomes_project 9 38570774 38570851 + Mir125b-1 miRNA miRNA MGP_BALBcJ_T0011021.1 MGP_BALBcJ_G0009146.1 mouse_genomes_project 9 14827857 14827968 - Gm44498 miRNA miRNA MGP_BALBcJ_T0094184.1 MGP_BALBcJ_G0035214.1 mouse_genomes_project 9 104215190 104220235 - MGP_BALBcJ_P0094184 Grm2 protein_coding protein_coding MGP_BALBcJ_T0094185.1 MGP_BALBcJ_G0035214.1 mouse_genomes_project 9 104215212 104228150 - MGP_BALBcJ_P0094185 Grm2 protein_coding protein_coding MGP_BALBcJ_T0094186.1 MGP_BALBcJ_G0035214.1 mouse_genomes_project 9 104216986 104228152 - MGP_BALBcJ_P0094186 Grm2 protein_coding protein_coding MGP_BALBcJ_T0094187.1 MGP_BALBcJ_G0035214.1 mouse_genomes_project 9 104217085 104218721 - Grm2 protein_coding processed_transcript MGP_BALBcJ_T0016104.1 MGP_BALBcJ_G0014201.1 mouse_genomes_project 9 97924087 97924352 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009318.1 MGP_BALBcJ_G0007484.1 mouse_genomes_project 9 109368508 109373427 - Gm42523 lincRNA lincRNA MGP_BALBcJ_T0091615.1 MGP_BALBcJ_G0034489.1 mouse_genomes_project 9 28262943 28301621 - MGP_BALBcJ_P0091615 Tmem45b protein_coding protein_coding MGP_BALBcJ_T0002457.1 MGP_BALBcJ_G0002366.1 mouse_genomes_project 9 106443354 106443696 + TEC TEC MGP_BALBcJ_T0093570.1 MGP_BALBcJ_G0035087.1 mouse_genomes_project 9 86640787 86657188 + MGP_BALBcJ_P0093570 Gm29094 protein_coding protein_coding MGP_BALBcJ_T0091886.1 MGP_BALBcJ_G0034622.1 mouse_genomes_project 9 36895033 36895957 + MGP_BALBcJ_P0091886 Olfr229 protein_coding protein_coding MGP_BALBcJ_T0094283.1 MGP_BALBcJ_G0035231.1 mouse_genomes_project 9 105129471 105132332 + MGP_BALBcJ_P0094283 Tusc2 protein_coding protein_coding MGP_BALBcJ_T0094284.1 MGP_BALBcJ_G0035231.1 mouse_genomes_project 9 105129570 105130168 + Tusc2 protein_coding processed_transcript MGP_BALBcJ_T0094285.1 MGP_BALBcJ_G0035231.1 mouse_genomes_project 9 105129589 105131215 + MGP_BALBcJ_P0094285 Tusc2 protein_coding protein_coding MGP_BALBcJ_T0094201.1 MGP_BALBcJ_G0035217.1 mouse_genomes_project 9 104404095 104461806 + MGP_BALBcJ_P0094201 Vprbp protein_coding protein_coding MGP_BALBcJ_T0094202.1 MGP_BALBcJ_G0035217.1 mouse_genomes_project 9 104411120 104462750 + MGP_BALBcJ_P0094202 Vprbp protein_coding protein_coding MGP_BALBcJ_T0094204.1 MGP_BALBcJ_G0035217.1 mouse_genomes_project 9 104432827 104435026 + Vprbp protein_coding retained_intron MGP_BALBcJ_T0094206.1 MGP_BALBcJ_G0035217.1 mouse_genomes_project 9 104456088 104461972 + MGP_BALBcJ_P0094206 Vprbp protein_coding protein_coding MGP_BALBcJ_T0092259.1 MGP_BALBcJ_G0034756.1 mouse_genomes_project 9 47716556 47732553 - MGP_BALBcJ_P0092259 AU019823 protein_coding protein_coding MGP_BALBcJ_T0092260.1 MGP_BALBcJ_G0034756.1 mouse_genomes_project 9 47716560 47732553 - MGP_BALBcJ_P0092260 AU019823 protein_coding protein_coding MGP_BALBcJ_T0092261.1 MGP_BALBcJ_G0034756.1 mouse_genomes_project 9 47718875 47732356 - MGP_BALBcJ_P0092261 AU019823 protein_coding protein_coding MGP_BALBcJ_T0092262.1 MGP_BALBcJ_G0034756.1 mouse_genomes_project 9 47718984 47732370 - MGP_BALBcJ_P0092262 AU019823 protein_coding protein_coding MGP_BALBcJ_T0092263.1 MGP_BALBcJ_G0034756.1 mouse_genomes_project 9 47719017 47732353 - MGP_BALBcJ_P0092263 AU019823 protein_coding protein_coding MGP_BALBcJ_T0092043.1 MGP_BALBcJ_G0034684.1 mouse_genomes_project 9 41537751 41550289 + MGP_BALBcJ_P0092043 Bcl9l protein_coding protein_coding MGP_BALBcJ_T0100192.1 MGP_BALBcJ_G0038228.1 mouse_genomes_project 9 62449195 62449311 - Gm25313 snRNA snRNA MGP_BALBcJ_T0009192.1 MGP_BALBcJ_G0007384.1 mouse_genomes_project 9 21986635 22008572 + Gm29642 lincRNA lincRNA MGP_BALBcJ_T0094143.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104035382 104043141 + MGP_BALBcJ_P0094143 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094144.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104035498 104042125 + Pcbp4 protein_coding processed_transcript MGP_BALBcJ_T0094145.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104035891 104036886 + Pcbp4 protein_coding processed_transcript MGP_BALBcJ_T0094146.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104035936 104045914 + MGP_BALBcJ_P0094146 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094147.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104035966 104042567 + Pcbp4 protein_coding retained_intron MGP_BALBcJ_T0094148.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104035979 104043820 + MGP_BALBcJ_P0094148 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094149.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104037732 104038488 + Pcbp4 protein_coding processed_transcript MGP_BALBcJ_T0094150.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104038145 104043125 + MGP_BALBcJ_P0094150 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094151.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104042444 104042915 + Pcbp4 protein_coding retained_intron MGP_BALBcJ_T0094152.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104042706 104043383 + MGP_BALBcJ_P0094152 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094153.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104043102 104045451 + MGP_BALBcJ_P0094153 Pcbp4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094154.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104043318 104044057 + Pcbp4 protein_coding retained_intron MGP_BALBcJ_T0094155.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104043343 104044841 + MGP_BALBcJ_P0094155 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094156.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104043638 104044307 + Pcbp4 protein_coding processed_transcript MGP_BALBcJ_T0094157.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104043765 104045597 + MGP_BALBcJ_P0094157 Pcbp4 protein_coding protein_coding MGP_BALBcJ_T0094158.1 MGP_BALBcJ_G0035205.1 mouse_genomes_project 9 104043948 104044567 + Pcbp4 protein_coding retained_intron MGP_BALBcJ_T0094247.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 104964469 105095039 + MGP_BALBcJ_P0094247 Cacna2d2 protein_coding protein_coding MGP_BALBcJ_T0094248.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 104964469 105095039 + MGP_BALBcJ_P0094248 Cacna2d2 protein_coding protein_coding MGP_BALBcJ_T0094249.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 104964710 105094687 + MGP_BALBcJ_P0094249 Cacna2d2 protein_coding protein_coding MGP_BALBcJ_T0094250.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 104964710 105095039 + MGP_BALBcJ_P0094250 Cacna2d2 protein_coding protein_coding MGP_BALBcJ_T0094251.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 104964887 105095040 + MGP_BALBcJ_P0094251 Cacna2d2 protein_coding protein_coding MGP_BALBcJ_T0094252.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 104964912 105093183 + MGP_BALBcJ_P0094252 Cacna2d2 protein_coding protein_coding MGP_BALBcJ_T0094253.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 105071069 105078988 + Cacna2d2 protein_coding processed_transcript MGP_BALBcJ_T0094254.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 105074737 105079350 + Cacna2d2 protein_coding processed_transcript MGP_BALBcJ_T0094255.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 105087229 105089203 + Cacna2d2 protein_coding retained_intron MGP_BALBcJ_T0094256.1 MGP_BALBcJ_G0035225.1 mouse_genomes_project 9 105092375 105093286 + Cacna2d2 protein_coding retained_intron MGP_BALBcJ_T0091786.1 MGP_BALBcJ_G0034539.1 mouse_genomes_project 9 34485920 34496342 - MGP_BALBcJ_P0091786 Spa17 protein_coding protein_coding MGP_BALBcJ_T0092434.1 MGP_BALBcJ_G0034811.1 mouse_genomes_project 9 52258046 52319375 + MGP_BALBcJ_P0092434 Ube2q2 protein_coding protein_coding MGP_BALBcJ_T0092435.1 MGP_BALBcJ_G0034811.1 mouse_genomes_project 9 52258587 52318245 + MGP_BALBcJ_P0092435 Ube2q2 protein_coding protein_coding MGP_BALBcJ_T0092436.1 MGP_BALBcJ_G0034811.1 mouse_genomes_project 9 52258827 52319380 + MGP_BALBcJ_P0092436 Ube2q2 protein_coding protein_coding MGP_BALBcJ_T0092437.1 MGP_BALBcJ_G0034811.1 mouse_genomes_project 9 52302660 52318056 + Ube2q2 protein_coding retained_intron MGP_BALBcJ_T0011061.1 MGP_BALBcJ_G0009186.1 mouse_genomes_project 9 69361280 69361419 + Gm27450 miRNA miRNA MGP_BALBcJ_T0094168.1 MGP_BALBcJ_G0035208.1 mouse_genomes_project 9 104057868 104065819 + Rrp9 protein_coding processed_transcript MGP_BALBcJ_T0094169.1 MGP_BALBcJ_G0035208.1 mouse_genomes_project 9 104059174 104069369 + MGP_BALBcJ_P0094169 Rrp9 protein_coding protein_coding MGP_BALBcJ_T0094170.1 MGP_BALBcJ_G0035208.1 mouse_genomes_project 9 104059223 104069361 + Rrp9 protein_coding retained_intron MGP_BALBcJ_T0094171.1 MGP_BALBcJ_G0035208.1 mouse_genomes_project 9 104059235 104059896 + Rrp9 protein_coding retained_intron MGP_BALBcJ_T0094172.1 MGP_BALBcJ_G0035208.1 mouse_genomes_project 9 104067798 104069367 + MGP_BALBcJ_P0094172 Rrp9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094173.1 MGP_BALBcJ_G0035208.1 mouse_genomes_project 9 104068408 104069369 + Rrp9 protein_coding retained_intron MGP_BALBcJ_T0095120.1 MGP_BALBcJ_G0035374.1 mouse_genomes_project 9 113201165 113268485 - MGP_BALBcJ_P0095120 Stt3b protein_coding protein_coding MGP_BALBcJ_T0091878.1 MGP_BALBcJ_G0034614.1 mouse_genomes_project 9 36672335 36673365 - MGP_BALBcJ_P0091878 Olfr149 protein_coding protein_coding MGP_BALBcJ_T0091284.1 MGP_BALBcJ_G0034351.1 mouse_genomes_project 9 15540402 15541341 - MGP_BALBcJ_P0091284 Olfr828 protein_coding protein_coding MGP_BALBcJ_T0092809.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61552920 61589026 - MGP_BALBcJ_P0092809 Dis3l protein_coding protein_coding MGP_BALBcJ_T0092810.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61552920 61588330 - MGP_BALBcJ_P0092810 Dis3l protein_coding protein_coding MGP_BALBcJ_T0092811.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61552952 61589004 - MGP_BALBcJ_P0092811 Dis3l protein_coding protein_coding MGP_BALBcJ_T0092812.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61570193 61589029 - Dis3l protein_coding retained_intron MGP_BALBcJ_T0092813.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61576256 61583326 - MGP_BALBcJ_P0092813 Dis3l protein_coding protein_coding MGP_BALBcJ_T0092814.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61583361 61588636 - Dis3l protein_coding processed_transcript MGP_BALBcJ_T0092815.1 MGP_BALBcJ_G0034914.1 mouse_genomes_project 9 61587329 61589130 - Dis3l protein_coding retained_intron MGP_BALBcJ_T0095031.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109138058 109220953 + MGP_BALBcJ_P0095031 Trank1 protein_coding protein_coding MGP_BALBcJ_T0095032.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109138259 109183365 + Trank1 protein_coding processed_transcript MGP_BALBcJ_T0095033.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109138415 109170902 + MGP_BALBcJ_P0095033 Trank1 protein_coding protein_coding MGP_BALBcJ_T0095034.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109138548 109208446 + MGP_BALBcJ_P0095034 Trank1 protein_coding unknown_likely_coding MGP_BALBcJ_T0095035.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109200185 109220953 + Trank1 protein_coding processed_transcript MGP_BALBcJ_T0095036.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109200248 109214419 + Trank1 protein_coding processed_transcript MGP_BALBcJ_T0095037.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109200253 109210525 + Trank1 protein_coding processed_transcript MGP_BALBcJ_T0095038.1 MGP_BALBcJ_G0035349.1 mouse_genomes_project 9 109211526 109215337 + Trank1 protein_coding retained_intron MGP_BALBcJ_T0091209.1 MGP_BALBcJ_G0034325.1 mouse_genomes_project 9 11421724 11425388 - MGP_BALBcJ_P0091209 Fut4 protein_coding protein_coding MGP_BALBcJ_T0091074.1 MGP_BALBcJ_G0034279.1 mouse_genomes_project 9 966987 982555 - MGP_BALBcJ_P0091074 Aasdhppt protein_coding protein_coding MGP_BALBcJ_T0093000.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733142 66767684 + MGP_BALBcJ_P0093000 Ice2 protein_coding protein_coding MGP_BALBcJ_T0093001.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733159 66766632 + Ice2 protein_coding retained_intron MGP_BALBcJ_T0093002.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733163 66741907 + MGP_BALBcJ_P0093002 Ice2 protein_coding protein_coding MGP_BALBcJ_T0093003.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733169 66742281 + MGP_BALBcJ_P0093003 Ice2 protein_coding protein_coding MGP_BALBcJ_T0093004.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733171 66741919 + MGP_BALBcJ_P0093004 Ice2 protein_coding protein_coding MGP_BALBcJ_T0093005.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733173 66742538 + MGP_BALBcJ_P0093005 Ice2 protein_coding protein_coding MGP_BALBcJ_T0093006.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733193 66744762 + MGP_BALBcJ_P0093006 Ice2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093007.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66733884 66741766 + Ice2 protein_coding retained_intron MGP_BALBcJ_T0093008.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66751298 66760267 + Ice2 protein_coding processed_transcript MGP_BALBcJ_T0093009.1 MGP_BALBcJ_G0034964.1 mouse_genomes_project 9 66751456 66761586 + Ice2 protein_coding retained_intron MGP_BALBcJ_T0009213.1 MGP_BALBcJ_G0007403.1 mouse_genomes_project 9 41516538 41518365 + C030014I23Rik lincRNA lincRNA MGP_BALBcJ_T0009214.1 MGP_BALBcJ_G0007403.1 mouse_genomes_project 9 41517392 41520815 + C030014I23Rik lincRNA lincRNA MGP_BALBcJ_T0005452.1 MGP_BALBcJ_G0004611.1 mouse_genomes_project 9 69958984 69962011 - Gm27241 antisense antisense MGP_BALBcJ_T0005453.1 MGP_BALBcJ_G0004611.1 mouse_genomes_project 9 69959118 69962183 - Gm27241 antisense antisense MGP_BALBcJ_T0091702.1 MGP_BALBcJ_G0034513.1 mouse_genomes_project 9 32634626 32648055 - MGP_BALBcJ_P0091702 Gm27235 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092255.1 MGP_BALBcJ_G0034753.1 mouse_genomes_project 9 47686298 47693122 + MGP_BALBcJ_P0092255 Il18 protein_coding protein_coding MGP_BALBcJ_T0092256.1 MGP_BALBcJ_G0034753.1 mouse_genomes_project 9 47686298 47693122 + MGP_BALBcJ_P0092256 Il18 protein_coding protein_coding MGP_BALBcJ_T0092842.1 MGP_BALBcJ_G0034922.1 mouse_genomes_project 9 62352485 62388761 + MGP_BALBcJ_P0092842 Igdcc4 protein_coding protein_coding MGP_BALBcJ_T0092843.1 MGP_BALBcJ_G0034922.1 mouse_genomes_project 9 62352534 62386401 + MGP_BALBcJ_P0092843 Igdcc4 protein_coding protein_coding MGP_BALBcJ_T0093173.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337473 70368504 + MGP_BALBcJ_P0093173 Ccpg1 protein_coding protein_coding MGP_BALBcJ_T0093174.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337548 70353904 + MGP_BALBcJ_P0093174 Ccpg1 protein_coding protein_coding MGP_BALBcJ_T0093175.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337622 70366102 + MGP_BALBcJ_P0093175 Ccpg1 protein_coding protein_coding MGP_BALBcJ_T0093176.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337630 70340104 + Ccpg1 protein_coding retained_intron MGP_BALBcJ_T0093177.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337649 70368164 + MGP_BALBcJ_P0093177 Ccpg1 protein_coding protein_coding MGP_BALBcJ_T0093178.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337649 70368502 + MGP_BALBcJ_P0093178 Ccpg1 protein_coding protein_coding MGP_BALBcJ_T0093179.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337652 70354176 + Ccpg1 protein_coding retained_intron MGP_BALBcJ_T0093180.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70337663 70366095 + MGP_BALBcJ_P0093180 Ccpg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093183.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70362052 70364141 + Ccpg1 protein_coding retained_intron MGP_BALBcJ_T0093186.1 MGP_BALBcJ_G0034996.1 mouse_genomes_project 9 70367136 70368504 + Ccpg1 protein_coding retained_intron MGP_BALBcJ_T0093997.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101717959 101823253 - MGP_BALBcJ_P0093997 Dnajc13 protein_coding protein_coding MGP_BALBcJ_T0093998.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101718729 101720174 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0093999.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101718850 101723523 - Dnajc13 protein_coding processed_transcript MGP_BALBcJ_T0094000.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101718944 101723781 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0094001.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101718994 101807157 - MGP_BALBcJ_P0094001 Dnajc13 protein_coding protein_coding MGP_BALBcJ_T0094002.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101723512 101729452 - MGP_BALBcJ_P0094002 Dnajc13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094003.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101728764 101731740 - MGP_BALBcJ_P0094003 Dnajc13 protein_coding protein_coding MGP_BALBcJ_T0094004.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101731449 101734709 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0094005.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101748716 101753622 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0094006.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101755756 101768266 - MGP_BALBcJ_P0094006 Dnajc13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094007.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101759171 101767166 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0094008.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101762711 101769662 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0094009.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101788685 101789325 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0094010.1 MGP_BALBcJ_G0035180.1 mouse_genomes_project 9 101797852 101823226 - Dnajc13 protein_coding retained_intron MGP_BALBcJ_T0100187.1 MGP_BALBcJ_G0038223.1 mouse_genomes_project 9 49895181 49895299 + Gm22242 snRNA snRNA MGP_BALBcJ_T0002385.1 MGP_BALBcJ_G0002295.1 mouse_genomes_project 9 74748200 74748751 + TEC TEC MGP_BALBcJ_T0094688.1 MGP_BALBcJ_G0035286.1 mouse_genomes_project 9 106426362 106436870 + MGP_BALBcJ_P0094688 Nckipsd protein_coding protein_coding MGP_BALBcJ_T0094689.1 MGP_BALBcJ_G0035286.1 mouse_genomes_project 9 106426367 106429144 + MGP_BALBcJ_P0094689 Nckipsd protein_coding protein_coding MGP_BALBcJ_T0094690.1 MGP_BALBcJ_G0035286.1 mouse_genomes_project 9 106426415 106429628 + MGP_BALBcJ_P0094690 Nckipsd protein_coding protein_coding MGP_BALBcJ_T0094691.1 MGP_BALBcJ_G0035286.1 mouse_genomes_project 9 106429947 106432104 + MGP_BALBcJ_P0094691 Nckipsd protein_coding protein_coding MGP_BALBcJ_T0094692.1 MGP_BALBcJ_G0035286.1 mouse_genomes_project 9 106431450 106432349 + Nckipsd protein_coding retained_intron MGP_BALBcJ_T0094693.1 MGP_BALBcJ_G0035286.1 mouse_genomes_project 9 106432858 106434145 + Nckipsd protein_coding retained_intron MGP_BALBcJ_T0002447.1 MGP_BALBcJ_G0002356.1 mouse_genomes_project 9 103292887 103293512 + TEC TEC MGP_BALBcJ_T0002373.1 MGP_BALBcJ_G0002283.1 mouse_genomes_project 9 70079679 70082427 + TEC TEC MGP_BALBcJ_T0098680.1 MGP_BALBcJ_G0036734.1 mouse_genomes_project 9 100089842 100089954 + Gm25669 rRNA rRNA MGP_BALBcJ_T0091302.1 MGP_BALBcJ_G0034369.1 mouse_genomes_project 9 16331724 16332716 + MGP_BALBcJ_P0091302 Olfr855 protein_coding protein_coding MGP_BALBcJ_T0094964.1 MGP_BALBcJ_G0035335.1 mouse_genomes_project 9 108650636 108657341 + MGP_BALBcJ_P0094964 Prss45 protein_coding protein_coding MGP_BALBcJ_T0094965.1 MGP_BALBcJ_G0035335.1 mouse_genomes_project 9 108650636 108657338 + MGP_BALBcJ_P0094965 Prss45 protein_coding protein_coding MGP_BALBcJ_T0094761.1 MGP_BALBcJ_G0035295.1 mouse_genomes_project 9 106631141 106647295 - MGP_BALBcJ_P0094761 Gm42641 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094763.1 MGP_BALBcJ_G0035295.1 mouse_genomes_project 9 106631144 106647344 - Gm42641 protein_coding retained_intron MGP_BALBcJ_T0094765.1 MGP_BALBcJ_G0035295.1 mouse_genomes_project 9 106631678 106633547 - MGP_BALBcJ_P0094765 Gm42641 protein_coding protein_coding MGP_BALBcJ_T0100165.1 MGP_BALBcJ_G0038201.1 mouse_genomes_project 9 6023997 6024059 + Gm22815 snRNA snRNA MGP_BALBcJ_T0091364.1 MGP_BALBcJ_G0034394.1 mouse_genomes_project 9 17435000 17494442 - MGP_BALBcJ_P0091364 Olfm2 protein_coding unknown_likely_coding MGP_BALBcJ_T0091365.1 MGP_BALBcJ_G0034394.1 mouse_genomes_project 9 17435298 17495881 - MGP_BALBcJ_P0091365 Olfm2 protein_coding protein_coding MGP_BALBcJ_T0002375.1 MGP_BALBcJ_G0002285.1 mouse_genomes_project 9 70244324 70245763 + TEC TEC MGP_BALBcJ_T0005400.1 MGP_BALBcJ_G0004575.1 mouse_genomes_project 9 21108533 21112642 - Gm15600 antisense antisense MGP_BALBcJ_T0091483.1 MGP_BALBcJ_G0034443.1 mouse_genomes_project 9 18801218 18837944 - MGP_BALBcJ_P0091483 Elavl3 protein_coding protein_coding MGP_BALBcJ_T0091484.1 MGP_BALBcJ_G0034443.1 mouse_genomes_project 9 18809835 18822881 - MGP_BALBcJ_P0091484 Elavl3 protein_coding unknown_likely_coding MGP_BALBcJ_T0091494.1 MGP_BALBcJ_G0034448.1 mouse_genomes_project 9 18912880 18918015 - MGP_BALBcJ_P0091494 Acp5 protein_coding protein_coding MGP_BALBcJ_T0091495.1 MGP_BALBcJ_G0034448.1 mouse_genomes_project 9 18912880 18921914 - MGP_BALBcJ_P0091495 Acp5 protein_coding protein_coding MGP_BALBcJ_T0091496.1 MGP_BALBcJ_G0034448.1 mouse_genomes_project 9 18912880 18916748 - MGP_BALBcJ_P0091496 Acp5 protein_coding protein_coding MGP_BALBcJ_T0093680.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325819 93337181 + Atr protein_coding retained_intron MGP_BALBcJ_T0093681.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325819 93421386 + MGP_BALBcJ_P0093681 Atr protein_coding protein_coding MGP_BALBcJ_T0093682.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325861 93372492 + Atr protein_coding retained_intron MGP_BALBcJ_T0093683.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325872 93331752 + Atr protein_coding retained_intron MGP_BALBcJ_T0093684.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325877 93329978 + Atr protein_coding retained_intron MGP_BALBcJ_T0093685.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325891 93338773 + Atr protein_coding retained_intron MGP_BALBcJ_T0093686.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93325947 93421366 + MGP_BALBcJ_P0093686 Atr protein_coding unknown_likely_coding MGP_BALBcJ_T0093687.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93357384 93359733 + Atr protein_coding retained_intron MGP_BALBcJ_T0093688.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93372974 93374788 + Atr protein_coding retained_intron MGP_BALBcJ_T0093689.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93384663 93388821 + Atr protein_coding retained_intron MGP_BALBcJ_T0093690.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93403905 93405680 + Atr protein_coding retained_intron MGP_BALBcJ_T0093691.1 MGP_BALBcJ_G0035113.1 mouse_genomes_project 9 93407087 93410880 + Atr protein_coding retained_intron MGP_BALBcJ_T0092042.1 MGP_BALBcJ_G0034683.1 mouse_genomes_project 9 41490330 41492382 - MGP_BALBcJ_P0092042 Upk2 protein_coding protein_coding MGP_BALBcJ_T0094308.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105153963 105159420 + MGP_BALBcJ_P0094308 Ifrd2 protein_coding protein_coding MGP_BALBcJ_T0094309.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105154047 105159420 + Ifrd2 protein_coding retained_intron MGP_BALBcJ_T0094310.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105154078 105158015 + MGP_BALBcJ_P0094310 Ifrd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094311.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105156756 105157628 + Ifrd2 protein_coding retained_intron MGP_BALBcJ_T0094312.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105157427 105159090 + MGP_BALBcJ_P0094312 Ifrd2 protein_coding protein_coding MGP_BALBcJ_T0094313.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105158466 105159136 + MGP_BALBcJ_P0094313 Ifrd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094314.1 MGP_BALBcJ_G0035236.1 mouse_genomes_project 9 105159008 105159771 + Ifrd2 protein_coding processed_transcript MGP_BALBcJ_T0093723.1 MGP_BALBcJ_G0035119.1 mouse_genomes_project 9 94012262 94104283 - MGP_BALBcJ_P0093723 Rasa2 protein_coding protein_coding MGP_BALBcJ_T0093724.1 MGP_BALBcJ_G0035119.1 mouse_genomes_project 9 94015267 94018145 - Rasa2 protein_coding retained_intron MGP_BALBcJ_T0093725.1 MGP_BALBcJ_G0035119.1 mouse_genomes_project 9 94019247 94104202 - MGP_BALBcJ_P0093725 Rasa2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093726.1 MGP_BALBcJ_G0035119.1 mouse_genomes_project 9 94029509 94044771 - Rasa2 protein_coding retained_intron MGP_BALBcJ_T0093727.1 MGP_BALBcJ_G0035119.1 mouse_genomes_project 9 94030215 94036794 - Rasa2 protein_coding retained_intron MGP_BALBcJ_T0093728.1 MGP_BALBcJ_G0035119.1 mouse_genomes_project 9 94044615 94053334 - Rasa2 protein_coding retained_intron MGP_BALBcJ_T0091123.1 MGP_BALBcJ_G0034300.1 mouse_genomes_project 9 4478013 4508115 + MGP_BALBcJ_P0091123 Tmem123 protein_coding protein_coding MGP_BALBcJ_T0091124.1 MGP_BALBcJ_G0034300.1 mouse_genomes_project 9 4478121 4504830 + MGP_BALBcJ_P0091124 Tmem123 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091125.1 MGP_BALBcJ_G0034300.1 mouse_genomes_project 9 4478137 4508110 + MGP_BALBcJ_P0091125 Tmem123 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009220.1 MGP_BALBcJ_G0007407.1 mouse_genomes_project 9 46158583 46162713 - 1700042D02Rik lincRNA lincRNA MGP_BALBcJ_T0092217.1 MGP_BALBcJ_G0034732.1 mouse_genomes_project 9 45544293 45545446 + MGP_BALBcJ_P0092217 protein_coding protein_coding MGP_BALBcJ_T0005497.1 MGP_BALBcJ_G0004642.1 mouse_genomes_project 9 103033649 103043296 + Gm19667 antisense antisense MGP_BALBcJ_T0091117.1 MGP_BALBcJ_G0034296.1 mouse_genomes_project 9 4257416 4267430 + MGP_BALBcJ_P0091117 Mmp8 protein_coding protein_coding MGP_BALBcJ_T0002405.1 MGP_BALBcJ_G0002314.1 mouse_genomes_project 9 88752371 88754790 - TEC TEC MGP_BALBcJ_T0016011.1 MGP_BALBcJ_G0014108.1 mouse_genomes_project 9 42320128 42320364 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092538.1 MGP_BALBcJ_G0034841.1 mouse_genomes_project 9 54707625 54710824 + MGP_BALBcJ_P0092538 Fam219b protein_coding protein_coding MGP_BALBcJ_T0093773.1 MGP_BALBcJ_G0035128.1 mouse_genomes_project 9 95901537 95925957 + MGP_BALBcJ_P0093773 Rbp1 protein_coding protein_coding MGP_BALBcJ_T0092603.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55403534 55435175 - MGP_BALBcJ_P0092603 Pml protein_coding protein_coding MGP_BALBcJ_T0092604.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55403534 55435271 - MGP_BALBcJ_P0092604 Pml protein_coding protein_coding MGP_BALBcJ_T0092605.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55404000 55418844 - Pml protein_coding retained_intron MGP_BALBcJ_T0092606.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55405209 55435145 - MGP_BALBcJ_P0092606 Pml protein_coding protein_coding MGP_BALBcJ_T0092607.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55405721 55415586 - Pml protein_coding processed_transcript MGP_BALBcJ_T0092608.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55406508 55435271 - MGP_BALBcJ_P0092608 Pml protein_coding protein_coding MGP_BALBcJ_T0092609.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55415306 55435271 - MGP_BALBcJ_P0092609 Pml protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092610.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55415849 55418854 - Pml protein_coding retained_intron MGP_BALBcJ_T0092611.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55432553 55435108 - MGP_BALBcJ_P0092611 Pml protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092612.1 MGP_BALBcJ_G0034860.1 mouse_genomes_project 9 55432598 55435271 - MGP_BALBcJ_P0092612 Pml protein_coding protein_coding MGP_BALBcJ_T0091454.1 MGP_BALBcJ_G0034427.1 mouse_genomes_project 9 18374740 18377989 + MGP_BALBcJ_P0091454 1810026J23Rik protein_coding protein_coding MGP_BALBcJ_T0093078.1 MGP_BALBcJ_G0034983.1 mouse_genomes_project 9 68833404 68922511 - Myzap protein_coding retained_intron MGP_BALBcJ_T0093079.1 MGP_BALBcJ_G0034983.1 mouse_genomes_project 9 68833404 68922511 - MGP_BALBcJ_P0093079 Myzap protein_coding protein_coding MGP_BALBcJ_T0093080.1 MGP_BALBcJ_G0034983.1 mouse_genomes_project 9 68834116 68922416 - MGP_BALBcJ_P0093080 Myzap protein_coding protein_coding MGP_BALBcJ_T0093081.1 MGP_BALBcJ_G0034983.1 mouse_genomes_project 9 68891009 68910067 - MGP_BALBcJ_P0093081 Myzap protein_coding protein_coding MGP_BALBcJ_T0093082.1 MGP_BALBcJ_G0034983.1 mouse_genomes_project 9 68894601 68922493 - MGP_BALBcJ_P0093082 Myzap protein_coding protein_coding MGP_BALBcJ_T0091828.1 MGP_BALBcJ_G0034576.1 mouse_genomes_project 9 35519330 35521637 + MGP_BALBcJ_P0091828 Olfr913 protein_coding protein_coding MGP_BALBcJ_T0093522.1 MGP_BALBcJ_G0035074.1 mouse_genomes_project 9 85097534 85125994 - MGP_BALBcJ_P0093522 Tbx18 protein_coding protein_coding MGP_BALBcJ_T0093523.1 MGP_BALBcJ_G0035074.1 mouse_genomes_project 9 85119117 85125235 - Tbx18 protein_coding processed_transcript MGP_BALBcJ_T0005436.1 MGP_BALBcJ_G0004599.1 mouse_genomes_project 9 55212148 55228721 + Gm16130 antisense antisense MGP_BALBcJ_T0009300.1 MGP_BALBcJ_G0007472.1 mouse_genomes_project 9 101478265 101519586 - Gm29154 lincRNA lincRNA MGP_BALBcJ_T0009301.1 MGP_BALBcJ_G0007472.1 mouse_genomes_project 9 101478368 101518870 - Gm29154 lincRNA lincRNA MGP_BALBcJ_T0016023.1 MGP_BALBcJ_G0014120.1 mouse_genomes_project 9 62555609 62555997 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101447.1 MGP_BALBcJ_G0039483.1 mouse_genomes_project 9 12014009 12014085 - Gm24339 snoRNA snoRNA MGP_BALBcJ_T0091691.1 MGP_BALBcJ_G0034507.1 mouse_genomes_project 9 32425143 32434721 - MGP_BALBcJ_P0091691 Hyls1 protein_coding protein_coding MGP_BALBcJ_T0091692.1 MGP_BALBcJ_G0034507.1 mouse_genomes_project 9 32428780 32434420 - Hyls1 protein_coding retained_intron MGP_BALBcJ_T0091629.1 MGP_BALBcJ_G0034495.1 mouse_genomes_project 9 29503760 29598165 + Ets1 protein_coding retained_intron MGP_BALBcJ_T0091630.1 MGP_BALBcJ_G0034495.1 mouse_genomes_project 9 29503778 29518983 + Ets1 protein_coding retained_intron MGP_BALBcJ_T0091631.1 MGP_BALBcJ_G0034495.1 mouse_genomes_project 9 29563528 29623686 + MGP_BALBcJ_P0091631 Ets1 protein_coding protein_coding MGP_BALBcJ_T0091632.1 MGP_BALBcJ_G0034495.1 mouse_genomes_project 9 29563863 29626500 + MGP_BALBcJ_P0091632 Ets1 protein_coding protein_coding MGP_BALBcJ_T0091633.1 MGP_BALBcJ_G0034495.1 mouse_genomes_project 9 29563863 29623112 + MGP_BALBcJ_P0091633 Ets1 protein_coding protein_coding MGP_BALBcJ_T0009299.1 MGP_BALBcJ_G0007471.1 mouse_genomes_project 9 100312916 100313176 - Gm28621 lincRNA lincRNA MGP_BALBcJ_T0016060.1 MGP_BALBcJ_G0014157.1 mouse_genomes_project 9 80474768 80474934 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091634.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31364340 31367611 + MGP_BALBcJ_P0091634 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0091635.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31364571 31388979 + Kirrel3 protein_coding processed_transcript MGP_BALBcJ_T0091636.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31364572 31920790 + MGP_BALBcJ_P0091636 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0091637.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31367185 31922226 + MGP_BALBcJ_P0091637 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0091638.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31367247 31922226 + MGP_BALBcJ_P0091638 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0091639.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31367247 31916423 + MGP_BALBcJ_P0091639 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0091640.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31367388 31921820 + MGP_BALBcJ_P0091640 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0091641.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31794072 31920790 + MGP_BALBcJ_P0091641 Kirrel3 protein_coding unknown_likely_coding MGP_BALBcJ_T0091642.1 MGP_BALBcJ_G0034496.1 mouse_genomes_project 9 31902017 31916421 + MGP_BALBcJ_P0091642 Kirrel3 protein_coding protein_coding MGP_BALBcJ_T0016017.1 MGP_BALBcJ_G0014114.1 mouse_genomes_project 9 55888744 55888912 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011033.1 MGP_BALBcJ_G0009158.1 mouse_genomes_project 9 38528502 38528582 + Mir100 miRNA miRNA MGP_BALBcJ_T0091073.1 MGP_BALBcJ_G0034278.1 mouse_genomes_project 9 223892 579829 + MGP_BALBcJ_P0091073 Gucy1a2 protein_coding protein_coding MGP_BALBcJ_T0091817.1 MGP_BALBcJ_G0034565.1 mouse_genomes_project 9 35299112 35300063 + MGP_BALBcJ_P0091817 Olfr251 protein_coding protein_coding MGP_BALBcJ_T0091823.1 MGP_BALBcJ_G0034571.1 mouse_genomes_project 9 35407309 35408245 + MGP_BALBcJ_P0091823 Olfr906 protein_coding protein_coding MGP_BALBcJ_T0091963.1 MGP_BALBcJ_G0034655.1 mouse_genomes_project 9 40258999 40279460 + MGP_BALBcJ_P0091963 protein_coding protein_coding MGP_BALBcJ_T0091964.1 MGP_BALBcJ_G0034655.1 mouse_genomes_project 9 40259036 40279388 + MGP_BALBcJ_P0091964 protein_coding unknown_likely_coding MGP_BALBcJ_T0016062.1 MGP_BALBcJ_G0014159.1 mouse_genomes_project 9 80900876 80901282 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095326.1 MGP_BALBcJ_G0035437.1 mouse_genomes_project 9 120469565 120501940 + MGP_BALBcJ_P0095326 Abhd5 protein_coding protein_coding MGP_BALBcJ_T0095327.1 MGP_BALBcJ_G0035437.1 mouse_genomes_project 9 120469687 120501940 + MGP_BALBcJ_P0095327 Abhd5 protein_coding protein_coding MGP_BALBcJ_T0095328.1 MGP_BALBcJ_G0035437.1 mouse_genomes_project 9 120469687 120500241 + MGP_BALBcJ_P0095328 Abhd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095329.1 MGP_BALBcJ_G0035437.1 mouse_genomes_project 9 120469689 120477238 + Abhd5 protein_coding processed_transcript MGP_BALBcJ_T0095330.1 MGP_BALBcJ_G0035437.1 mouse_genomes_project 9 120469689 120498348 + MGP_BALBcJ_P0095330 Abhd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095331.1 MGP_BALBcJ_G0035437.1 mouse_genomes_project 9 120484075 120488683 + MGP_BALBcJ_P0095331 Abhd5 protein_coding protein_coding MGP_BALBcJ_T0018506.1 MGP_BALBcJ_G0015683.1 mouse_genomes_project 9 72180343 72185282 + Gm16551 processed_transcript lincRNA MGP_BALBcJ_T0018507.1 MGP_BALBcJ_G0015683.1 mouse_genomes_project 9 72180857 72192482 + Gm16551 processed_transcript lincRNA MGP_BALBcJ_T0018508.1 MGP_BALBcJ_G0015683.1 mouse_genomes_project 9 72180923 72181788 + Gm16551 processed_transcript retained_intron MGP_BALBcJ_T0018509.1 MGP_BALBcJ_G0015683.1 mouse_genomes_project 9 72180946 72185281 + Gm16551 processed_transcript lincRNA MGP_BALBcJ_T0018510.1 MGP_BALBcJ_G0015683.1 mouse_genomes_project 9 72181415 72183613 + Gm16551 processed_transcript retained_intron MGP_BALBcJ_T0092023.1 MGP_BALBcJ_G0034672.1 mouse_genomes_project 9 41349589 41360608 - MGP_BALBcJ_P0092023 C2cd2l protein_coding protein_coding MGP_BALBcJ_T0091778.1 MGP_BALBcJ_G0034536.1 mouse_genomes_project 9 34410344 34420542 + MGP_BALBcJ_P0091778 Esam protein_coding protein_coding MGP_BALBcJ_T0091779.1 MGP_BALBcJ_G0034536.1 mouse_genomes_project 9 34411047 34419337 + MGP_BALBcJ_P0091779 Esam protein_coding protein_coding MGP_BALBcJ_T0091780.1 MGP_BALBcJ_G0034536.1 mouse_genomes_project 9 34412516 34413908 + MGP_BALBcJ_P0091780 Esam protein_coding protein_coding MGP_BALBcJ_T0091781.1 MGP_BALBcJ_G0034536.1 mouse_genomes_project 9 34413190 34416430 + MGP_BALBcJ_P0091781 Esam protein_coding protein_coding MGP_BALBcJ_T0091782.1 MGP_BALBcJ_G0034536.1 mouse_genomes_project 9 34418474 34419715 + Esam protein_coding retained_intron MGP_BALBcJ_T0016071.1 MGP_BALBcJ_G0014168.1 mouse_genomes_project 9 85523792 85524378 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0018495.1 MGP_BALBcJ_G0015678.1 mouse_genomes_project 9 60632797 60728121 + Gm16759 processed_transcript lincRNA MGP_BALBcJ_T0018496.1 MGP_BALBcJ_G0015678.1 mouse_genomes_project 9 60633570 60803708 + Gm16759 processed_transcript lincRNA MGP_BALBcJ_T0018497.1 MGP_BALBcJ_G0015678.1 mouse_genomes_project 9 60633577 60658889 + Gm16759 processed_transcript lincRNA MGP_BALBcJ_T0018498.1 MGP_BALBcJ_G0015678.1 mouse_genomes_project 9 60765592 60802033 + Gm16759 processed_transcript processed_transcript MGP_BALBcJ_T0092389.1 MGP_BALBcJ_G0034794.1 mouse_genomes_project 9 51273741 51301208 - MGP_BALBcJ_P0092389 Cyp19a1 protein_coding protein_coding MGP_BALBcJ_T0091298.1 MGP_BALBcJ_G0034365.1 mouse_genomes_project 9 16213814 16214762 - MGP_BALBcJ_P0091298 Olfr850 protein_coding protein_coding MGP_BALBcJ_T0093400.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80259424 80376002 - MGP_BALBcJ_P0093400 Phip protein_coding protein_coding MGP_BALBcJ_T0093401.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80263587 80289832 - Phip protein_coding retained_intron MGP_BALBcJ_T0093402.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80282164 80285450 - Phip protein_coding retained_intron MGP_BALBcJ_T0093403.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80287787 80375894 - Phip protein_coding retained_intron MGP_BALBcJ_T0093404.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80288143 80289552 - Phip protein_coding retained_intron MGP_BALBcJ_T0093405.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80290624 80294573 - Phip protein_coding retained_intron MGP_BALBcJ_T0093406.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80294115 80325823 - MGP_BALBcJ_P0093406 Phip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093407.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80296902 80302378 - Phip protein_coding retained_intron MGP_BALBcJ_T0093408.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80306492 80375912 - Phip protein_coding retained_intron MGP_BALBcJ_T0093409.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80307102 80320367 - MGP_BALBcJ_P0093409 Phip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093410.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80309223 80311016 - Phip protein_coding retained_intron MGP_BALBcJ_T0093411.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80319095 80321399 - Phip protein_coding retained_intron MGP_BALBcJ_T0093412.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80320405 80369391 - MGP_BALBcJ_P0093412 Phip protein_coding protein_coding MGP_BALBcJ_T0093413.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80323213 80326280 - Phip protein_coding retained_intron MGP_BALBcJ_T0093414.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80337755 80375902 - Phip protein_coding retained_intron MGP_BALBcJ_T0093415.1 MGP_BALBcJ_G0035053.1 mouse_genomes_project 9 80349054 80375905 - Phip protein_coding retained_intron MGP_BALBcJ_T0093149.1 MGP_BALBcJ_G0034989.1 mouse_genomes_project 9 69875285 69950221 + Rfx7 protein_coding processed_transcript MGP_BALBcJ_T0093150.1 MGP_BALBcJ_G0034989.1 mouse_genomes_project 9 69875651 69957618 + MGP_BALBcJ_P0093150 Rfx7 protein_coding protein_coding MGP_BALBcJ_T0093151.1 MGP_BALBcJ_G0034989.1 mouse_genomes_project 9 69875783 69957681 + MGP_BALBcJ_P0093151 Rfx7 protein_coding protein_coding MGP_BALBcJ_T0093152.1 MGP_BALBcJ_G0034989.1 mouse_genomes_project 9 69875868 69965039 + MGP_BALBcJ_P0093152 Rfx7 protein_coding protein_coding MGP_BALBcJ_T0093153.1 MGP_BALBcJ_G0034989.1 mouse_genomes_project 9 69944812 69947572 + Rfx7 protein_coding retained_intron MGP_BALBcJ_T0093154.1 MGP_BALBcJ_G0034989.1 mouse_genomes_project 9 69955590 69957669 + Rfx7 protein_coding retained_intron MGP_BALBcJ_T0091726.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33586971 33609578 - MGP_BALBcJ_P0091726 Stt3a protein_coding protein_coding MGP_BALBcJ_T0091727.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33587470 33627298 - MGP_BALBcJ_P0091727 Stt3a protein_coding protein_coding MGP_BALBcJ_T0091728.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33607044 33627263 - MGP_BALBcJ_P0091728 Stt3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091729.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33613480 33614484 - Stt3a protein_coding retained_intron MGP_BALBcJ_T0091730.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33613903 33626994 - MGP_BALBcJ_P0091730 Stt3a protein_coding protein_coding MGP_BALBcJ_T0091731.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33622290 33627217 - Stt3a protein_coding retained_intron MGP_BALBcJ_T0091732.1 MGP_BALBcJ_G0034525.1 mouse_genomes_project 9 33622510 33627260 - Stt3a protein_coding retained_intron MGP_BALBcJ_T0009188.1 MGP_BALBcJ_G0007380.1 mouse_genomes_project 9 17807830 17811323 - Gm26592 lincRNA lincRNA MGP_BALBcJ_T0091858.1 MGP_BALBcJ_G0034600.1 mouse_genomes_project 9 36196425 36197370 - MGP_BALBcJ_P0091858 Olfr1537 protein_coding protein_coding MGP_BALBcJ_T0101502.1 MGP_BALBcJ_G0039538.1 mouse_genomes_project 9 106040109 106040218 - Gm25456 snoRNA snoRNA MGP_BALBcJ_T0091670.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32084422 32132781 - MGP_BALBcJ_P0091670 Fam118b protein_coding protein_coding MGP_BALBcJ_T0091671.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32084485 32132806 - MGP_BALBcJ_P0091671 Fam118b protein_coding protein_coding MGP_BALBcJ_T0091672.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32084485 32132778 - MGP_BALBcJ_P0091672 Fam118b protein_coding protein_coding MGP_BALBcJ_T0091673.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32084700 32102893 - MGP_BALBcJ_P0091673 Fam118b protein_coding protein_coding MGP_BALBcJ_T0091674.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32089004 32132768 - MGP_BALBcJ_P0091674 Fam118b protein_coding protein_coding MGP_BALBcJ_T0091675.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32099505 32132781 - Fam118b protein_coding retained_intron MGP_BALBcJ_T0091676.1 MGP_BALBcJ_G0034502.1 mouse_genomes_project 9 32131316 32132781 - Fam118b protein_coding retained_intron MGP_BALBcJ_T0091368.1 MGP_BALBcJ_G0034396.1 mouse_genomes_project 9 17587213 17594873 + MGP_BALBcJ_P0091368 Rdh8 protein_coding protein_coding MGP_BALBcJ_T0016079.1 MGP_BALBcJ_G0014176.1 mouse_genomes_project 9 88196341 88196504 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094958.1 MGP_BALBcJ_G0035332.1 mouse_genomes_project 9 108608440 108614033 + MGP_BALBcJ_P0094958 Prss42 protein_coding protein_coding MGP_BALBcJ_T0091863.1 MGP_BALBcJ_G0034605.1 mouse_genomes_project 9 36459671 36469432 - MGP_BALBcJ_P0091863 Olfr44 protein_coding protein_coding MGP_BALBcJ_T0011084.1 MGP_BALBcJ_G0009209.1 mouse_genomes_project 9 109969338 109969414 - Mir128-2 miRNA miRNA MGP_BALBcJ_T0092495.1 MGP_BALBcJ_G0034830.1 mouse_genomes_project 9 54151641 54220974 + MGP_BALBcJ_P0092495 Ptpn9 protein_coding protein_coding MGP_BALBcJ_T0002422.1 MGP_BALBcJ_G0002331.1 mouse_genomes_project 9 98187357 98190607 + TEC TEC MGP_BALBcJ_T0101504.1 MGP_BALBcJ_G0039540.1 mouse_genomes_project 9 107916645 107916783 - Gm23377 snoRNA snoRNA MGP_BALBcJ_T0016003.1 MGP_BALBcJ_G0014100.1 mouse_genomes_project 9 32438437 32438726 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0015999.1 MGP_BALBcJ_G0014096.1 mouse_genomes_project 9 29496655 29497073 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091366.1 MGP_BALBcJ_G0034395.1 mouse_genomes_project 9 17537831 17583777 - MGP_BALBcJ_P0091366 Col5a3 protein_coding protein_coding MGP_BALBcJ_T0091367.1 MGP_BALBcJ_G0034395.1 mouse_genomes_project 9 17550428 17583777 - Col5a3 protein_coding retained_intron MGP_BALBcJ_T0092808.1 MGP_BALBcJ_G0034913.1 mouse_genomes_project 9 61526059 61550746 + MGP_BALBcJ_P0092808 Tipin protein_coding unknown_likely_coding MGP_BALBcJ_T0092200.1 MGP_BALBcJ_G0034727.1 mouse_genomes_project 9 44074324 44079044 + MGP_BALBcJ_P0092200 protein_coding protein_coding MGP_BALBcJ_T0092326.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48022488 48138439 - MGP_BALBcJ_P0092326 Sik2 protein_coding protein_coding MGP_BALBcJ_T0092327.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48022488 48138339 - MGP_BALBcJ_P0092327 Sik2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092328.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48022488 48138302 - MGP_BALBcJ_P0092328 Sik2 protein_coding protein_coding MGP_BALBcJ_T0092329.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48022488 48138302 - MGP_BALBcJ_P0092329 Sik2 protein_coding protein_coding MGP_BALBcJ_T0092330.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48057667 48138392 - Sik2 protein_coding processed_transcript MGP_BALBcJ_T0092331.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48059965 48138350 - Sik2 protein_coding processed_transcript MGP_BALBcJ_T0092332.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48063239 48138366 - Sik2 protein_coding retained_intron MGP_BALBcJ_T0092333.1 MGP_BALBcJ_G0034767.1 mouse_genomes_project 9 48124955 48138377 - Sik2 protein_coding retained_intron MGP_BALBcJ_T0016028.1 MGP_BALBcJ_G0014125.1 mouse_genomes_project 9 69284378 69284477 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091303.1 MGP_BALBcJ_G0034370.1 mouse_genomes_project 9 16356817 16379233 + MGP_BALBcJ_P0091303 Zfp317 protein_coding unknown_likely_coding MGP_BALBcJ_T0005412.1 MGP_BALBcJ_G0004586.1 mouse_genomes_project 9 42231561 42233726 + Gm17099 antisense antisense MGP_BALBcJ_T0005457.1 MGP_BALBcJ_G0004615.1 mouse_genomes_project 9 75832022 75833226 - 4930542C12Rik antisense antisense MGP_BALBcJ_T0094799.1 MGP_BALBcJ_G0035309.1 mouse_genomes_project 9 107135327 107137486 - protein_coding retained_intron MGP_BALBcJ_T0094800.1 MGP_BALBcJ_G0035309.1 mouse_genomes_project 9 107137243 107425298 - MGP_BALBcJ_P0094800 protein_coding protein_coding MGP_BALBcJ_T0011070.1 MGP_BALBcJ_G0009195.1 mouse_genomes_project 9 103729525 103729615 + Mir135a-1 miRNA miRNA MGP_BALBcJ_T0100229.1 MGP_BALBcJ_G0038265.1 mouse_genomes_project 9 116535769 116535850 - Gm22479 snRNA snRNA MGP_BALBcJ_T0002374.1 MGP_BALBcJ_G0002284.1 mouse_genomes_project 9 70224664 70226560 + TEC TEC MGP_BALBcJ_T0091283.1 MGP_BALBcJ_G0034350.1 mouse_genomes_project 9 15481911 15482965 - MGP_BALBcJ_P0091283 Olfr24 protein_coding protein_coding MGP_BALBcJ_T0016045.1 MGP_BALBcJ_G0014142.1 mouse_genomes_project 9 74041846 74042222 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009284.1 MGP_BALBcJ_G0007457.1 mouse_genomes_project 9 93906742 93909097 - BC043934 lincRNA lincRNA MGP_BALBcJ_T0009285.1 MGP_BALBcJ_G0007457.1 mouse_genomes_project 9 93906743 93908393 - BC043934 lincRNA lincRNA MGP_BALBcJ_T0092219.1 MGP_BALBcJ_G0034734.1 mouse_genomes_project 9 45590343 45596956 - MGP_BALBcJ_P0092219 Rbm7 protein_coding protein_coding MGP_BALBcJ_T0093771.1 MGP_BALBcJ_G0035127.1 mouse_genomes_project 9 95781476 95782059 + MGP_BALBcJ_P0093771 protein_coding protein_coding MGP_BALBcJ_T0091563.1 MGP_BALBcJ_G0034474.1 mouse_genomes_project 9 23807246 23833351 - MGP_BALBcJ_P0091563 Vps26b protein_coding protein_coding MGP_BALBcJ_T0101441.1 MGP_BALBcJ_G0039477.1 mouse_genomes_project 9 12002183 12002320 + Gm25791 snoRNA snoRNA MGP_BALBcJ_T0094214.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104474581 104795101 - MGP_BALBcJ_P0094214 Dock3 protein_coding protein_coding MGP_BALBcJ_T0094215.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104474862 104496640 - MGP_BALBcJ_P0094215 Dock3 protein_coding protein_coding MGP_BALBcJ_T0094216.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104478533 104483542 - MGP_BALBcJ_P0094216 Dock3 protein_coding protein_coding MGP_BALBcJ_T0094217.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104490216 104492270 - Dock3 protein_coding processed_transcript MGP_BALBcJ_T0094218.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104494997 104496942 - Dock3 protein_coding retained_intron MGP_BALBcJ_T0094219.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104498140 104529396 - MGP_BALBcJ_P0094219 Dock3 protein_coding protein_coding MGP_BALBcJ_T0094220.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104520816 104544622 - MGP_BALBcJ_P0094220 Dock3 protein_coding protein_coding MGP_BALBcJ_T0094221.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104606007 104607883 - Dock3 protein_coding retained_intron MGP_BALBcJ_T0094222.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104633929 104795060 - Dock3 protein_coding retained_intron MGP_BALBcJ_T0094223.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104661500 104795048 - Dock3 protein_coding retained_intron MGP_BALBcJ_T0094224.1 MGP_BALBcJ_G0035220.1 mouse_genomes_project 9 104682209 104794774 - Dock3 protein_coding retained_intron MGP_BALBcJ_T0011025.1 MGP_BALBcJ_G0009150.1 mouse_genomes_project 9 17849070 17849162 - Mir7082 miRNA miRNA MGP_BALBcJ_T0009328.1 MGP_BALBcJ_G0007491.1 mouse_genomes_project 9 117540380 117545679 - 4930516B21Rik lincRNA lincRNA MGP_BALBcJ_T0095332.1 MGP_BALBcJ_G0035438.1 mouse_genomes_project 9 120856460 120911250 + MGP_BALBcJ_P0095332 Topaz1 protein_coding protein_coding MGP_BALBcJ_T0093165.1 MGP_BALBcJ_G0034991.1 mouse_genomes_project 9 70160889 70269738 + MGP_BALBcJ_P0093165 Prtg protein_coding protein_coding MGP_BALBcJ_T0093166.1 MGP_BALBcJ_G0034991.1 mouse_genomes_project 9 70262926 70264753 + Prtg protein_coding retained_intron MGP_BALBcJ_T0094207.1 MGP_BALBcJ_G0035219.1 mouse_genomes_project 9 104462675 104469182 - MGP_BALBcJ_P0094207 Rbm15b protein_coding protein_coding MGP_BALBcJ_T0094208.1 MGP_BALBcJ_G0035219.1 mouse_genomes_project 9 104466504 104467373 - MGP_BALBcJ_P0094208 Rbm15b protein_coding protein_coding MGP_BALBcJ_T0094762.1 MGP_BALBcJ_G0035296.1 mouse_genomes_project 9 106631141 106632943 - MGP_BALBcJ_P0094762 Trex1 protein_coding protein_coding MGP_BALBcJ_T0094764.1 MGP_BALBcJ_G0035296.1 mouse_genomes_project 9 106631146 106632460 - MGP_BALBcJ_P0094764 Trex1 protein_coding protein_coding MGP_BALBcJ_T0011016.1 MGP_BALBcJ_G0009141.1 mouse_genomes_project 9 6377828 6377929 - Gm26195 miRNA miRNA MGP_BALBcJ_T0095147.1 MGP_BALBcJ_G0035380.1 mouse_genomes_project 9 116123481 116196399 - MGP_BALBcJ_P0095147 Cmc1 protein_coding protein_coding MGP_BALBcJ_T0092486.1 MGP_BALBcJ_G0034823.1 mouse_genomes_project 9 53551234 53627324 + MGP_BALBcJ_P0092486 Hmg20a protein_coding protein_coding MGP_BALBcJ_T0095184.1 MGP_BALBcJ_G0035390.1 mouse_genomes_project 9 117257999 117278625 - MGP_BALBcJ_P0095184 Slc22a14 protein_coding protein_coding MGP_BALBcJ_T0095185.1 MGP_BALBcJ_G0035390.1 mouse_genomes_project 9 117258000 117462492 - MGP_BALBcJ_P0095185 Slc22a14 protein_coding protein_coding MGP_BALBcJ_T0095186.1 MGP_BALBcJ_G0035390.1 mouse_genomes_project 9 117258212 117262173 - MGP_BALBcJ_P0095186 Slc22a14 protein_coding protein_coding MGP_BALBcJ_T0095187.1 MGP_BALBcJ_G0035390.1 mouse_genomes_project 9 117269501 117278580 - MGP_BALBcJ_P0095187 Slc22a14 protein_coding protein_coding MGP_BALBcJ_T0091455.1 MGP_BALBcJ_G0034428.1 mouse_genomes_project 9 18398164 18486471 + MGP_BALBcJ_P0091455 Smarca4 protein_coding protein_coding MGP_BALBcJ_T0091456.1 MGP_BALBcJ_G0034428.1 mouse_genomes_project 9 18398164 18486458 + MGP_BALBcJ_P0091456 Smarca4 protein_coding protein_coding MGP_BALBcJ_T0091457.1 MGP_BALBcJ_G0034428.1 mouse_genomes_project 9 18398259 18485607 + MGP_BALBcJ_P0091457 Smarca4 protein_coding protein_coding MGP_BALBcJ_T0091458.1 MGP_BALBcJ_G0034428.1 mouse_genomes_project 9 18417702 18468076 + MGP_BALBcJ_P0091458 Smarca4 protein_coding protein_coding MGP_BALBcJ_T0091423.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205555 18288959 + MGP_BALBcJ_P0091423 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091424.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205579 18288343 + MGP_BALBcJ_P0091424 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091425.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205592 18288345 + MGP_BALBcJ_P0091425 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091426.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205615 18249745 + MGP_BALBcJ_P0091426 Dnm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091427.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205618 18288331 + MGP_BALBcJ_P0091427 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091428.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205623 18288329 + MGP_BALBcJ_P0091428 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091429.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205743 18287607 + MGP_BALBcJ_P0091429 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091430.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205743 18272264 + MGP_BALBcJ_P0091430 Dnm2 protein_coding unknown_likely_coding MGP_BALBcJ_T0091431.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205890 18273841 + Dnm2 protein_coding processed_transcript MGP_BALBcJ_T0091432.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18205891 18288959 + MGP_BALBcJ_P0091432 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091433.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18237597 18238061 + Dnm2 protein_coding processed_transcript MGP_BALBcJ_T0091434.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18258318 18281726 + MGP_BALBcJ_P0091434 Dnm2 protein_coding protein_coding MGP_BALBcJ_T0091435.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18262143 18288964 + Dnm2 protein_coding retained_intron MGP_BALBcJ_T0091436.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18276357 18285827 + Dnm2 protein_coding retained_intron MGP_BALBcJ_T0091437.1 MGP_BALBcJ_G0034422.1 mouse_genomes_project 9 18286311 18287604 + Dnm2 protein_coding processed_transcript MGP_BALBcJ_T0094732.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567074 106610618 + MGP_BALBcJ_P0094732 Pfkfb4 protein_coding protein_coding MGP_BALBcJ_T0094733.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567198 106610618 + MGP_BALBcJ_P0094733 Pfkfb4 protein_coding protein_coding MGP_BALBcJ_T0094734.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567244 106574566 + Pfkfb4 protein_coding retained_intron MGP_BALBcJ_T0094735.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567288 106568198 + Pfkfb4 protein_coding retained_intron MGP_BALBcJ_T0094736.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567312 106609102 + Pfkfb4 protein_coding retained_intron MGP_BALBcJ_T0094737.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567312 106609102 + MGP_BALBcJ_P0094737 Pfkfb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094738.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106567312 106609102 + MGP_BALBcJ_P0094738 Pfkfb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094739.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106574184 106585955 + Pfkfb4 protein_coding processed_transcript MGP_BALBcJ_T0094740.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106586484 106607285 + MGP_BALBcJ_P0094740 Pfkfb4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094741.1 MGP_BALBcJ_G0035293.1 mouse_genomes_project 9 106594313 106610587 + Pfkfb4 protein_coding processed_transcript MGP_BALBcJ_T0018473.1 MGP_BALBcJ_G0015673.1 mouse_genomes_project 9 37761853 37765223 - Gm16096 processed_transcript processed_transcript MGP_BALBcJ_T0018474.1 MGP_BALBcJ_G0015673.1 mouse_genomes_project 9 37761859 37764498 - Gm16096 processed_transcript processed_transcript MGP_BALBcJ_T0018527.1 MGP_BALBcJ_G0015692.1 mouse_genomes_project 9 94236709 94244650 + C430002N11Rik processed_transcript retained_intron MGP_BALBcJ_T0018528.1 MGP_BALBcJ_G0015692.1 mouse_genomes_project 9 94236722 94245445 + C430002N11Rik processed_transcript retained_intron MGP_BALBcJ_T0018529.1 MGP_BALBcJ_G0015692.1 mouse_genomes_project 9 94236722 94253509 + C430002N11Rik processed_transcript lincRNA MGP_BALBcJ_T0018530.1 MGP_BALBcJ_G0015692.1 mouse_genomes_project 9 94236732 94244662 + C430002N11Rik processed_transcript retained_intron MGP_BALBcJ_T0018531.1 MGP_BALBcJ_G0015692.1 mouse_genomes_project 9 94236748 94244341 + C430002N11Rik processed_transcript lincRNA MGP_BALBcJ_T0091831.1 MGP_BALBcJ_G0034579.1 mouse_genomes_project 9 35598614 35599544 - MGP_BALBcJ_P0091831 Olfr917 protein_coding protein_coding MGP_BALBcJ_T0101454.1 MGP_BALBcJ_G0039490.1 mouse_genomes_project 9 22403829 22403957 - Gm25346 snoRNA snoRNA MGP_BALBcJ_T0092314.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47974792 47991193 + Ppp2r1b protein_coding processed_transcript MGP_BALBcJ_T0092315.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986341 48022485 + MGP_BALBcJ_P0092315 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092316.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986341 48023917 + MGP_BALBcJ_P0092316 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092317.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986354 48011126 + MGP_BALBcJ_P0092317 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092318.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986374 48009782 + MGP_BALBcJ_P0092318 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092319.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986380 48022492 + MGP_BALBcJ_P0092319 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092320.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986381 48022485 + MGP_BALBcJ_P0092320 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092321.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986383 48009629 + MGP_BALBcJ_P0092321 Ppp2r1b protein_coding protein_coding MGP_BALBcJ_T0092322.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47986396 48010102 + MGP_BALBcJ_P0092322 Ppp2r1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092323.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 47999434 48009724 + MGP_BALBcJ_P0092323 Ppp2r1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092324.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 48002700 48007757 + Ppp2r1b protein_coding processed_transcript MGP_BALBcJ_T0092325.1 MGP_BALBcJ_G0034766.1 mouse_genomes_project 9 48007779 48008831 + Ppp2r1b protein_coding retained_intron MGP_BALBcJ_T0093787.1 MGP_BALBcJ_G0035133.1 mouse_genomes_project 9 96334990 96335942 + MGP_BALBcJ_P0093787 protein_coding protein_coding MGP_BALBcJ_T0092185.1 MGP_BALBcJ_G0034723.1 mouse_genomes_project 9 43336169 43339456 + MGP_BALBcJ_P0092185 Apoa5 protein_coding protein_coding MGP_BALBcJ_T0092186.1 MGP_BALBcJ_G0034723.1 mouse_genomes_project 9 43336614 43339456 + MGP_BALBcJ_P0092186 Apoa5 protein_coding protein_coding MGP_BALBcJ_T0093205.1 MGP_BALBcJ_G0035002.1 mouse_genomes_project 9 70830095 71304288 - MGP_BALBcJ_P0093205 Unc13c protein_coding protein_coding MGP_BALBcJ_T0093206.1 MGP_BALBcJ_G0035002.1 mouse_genomes_project 9 70830099 71304279 - MGP_BALBcJ_P0093206 Unc13c protein_coding unknown_likely_coding MGP_BALBcJ_T0093207.1 MGP_BALBcJ_G0035002.1 mouse_genomes_project 9 70831542 71277355 - MGP_BALBcJ_P0093207 Unc13c protein_coding protein_coding MGP_BALBcJ_T0011081.1 MGP_BALBcJ_G0009206.1 mouse_genomes_project 9 108079133 108079256 + Mir6236 miRNA miRNA MGP_BALBcJ_T0092598.1 MGP_BALBcJ_G0034859.1 mouse_genomes_project 9 55377201 55383189 - MGP_BALBcJ_P0092598 Islr2 protein_coding protein_coding MGP_BALBcJ_T0092599.1 MGP_BALBcJ_G0034859.1 mouse_genomes_project 9 55377201 55385223 - MGP_BALBcJ_P0092599 Islr2 protein_coding protein_coding MGP_BALBcJ_T0092600.1 MGP_BALBcJ_G0034859.1 mouse_genomes_project 9 55377201 55383438 - MGP_BALBcJ_P0092600 Islr2 protein_coding protein_coding MGP_BALBcJ_T0092601.1 MGP_BALBcJ_G0034859.1 mouse_genomes_project 9 55377201 55382703 - MGP_BALBcJ_P0092601 Islr2 protein_coding protein_coding MGP_BALBcJ_T0092602.1 MGP_BALBcJ_G0034859.1 mouse_genomes_project 9 55377201 55382619 - MGP_BALBcJ_P0092602 Islr2 protein_coding protein_coding MGP_BALBcJ_T0091733.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33640882 33659357 - MGP_BALBcJ_P0091733 Ei24 protein_coding protein_coding MGP_BALBcJ_T0091734.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33640882 33659274 - MGP_BALBcJ_P0091734 Ei24 protein_coding protein_coding MGP_BALBcJ_T0091735.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33641601 33644912 - Ei24 protein_coding retained_intron MGP_BALBcJ_T0091736.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33641898 33644417 - Ei24 protein_coding retained_intron MGP_BALBcJ_T0091737.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33644480 33647806 - Ei24 protein_coding retained_intron MGP_BALBcJ_T0091738.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33647397 33659021 - MGP_BALBcJ_P0091738 Ei24 protein_coding protein_coding MGP_BALBcJ_T0091739.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33647406 33652267 - MGP_BALBcJ_P0091739 Ei24 protein_coding protein_coding MGP_BALBcJ_T0091740.1 MGP_BALBcJ_G0034526.1 mouse_genomes_project 9 33648315 33659362 - MGP_BALBcJ_P0091740 Ei24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091894.1 MGP_BALBcJ_G0034630.1 mouse_genomes_project 9 37042473 37043439 + MGP_BALBcJ_P0091894 Olfr982 protein_coding protein_coding MGP_BALBcJ_T0091819.1 MGP_BALBcJ_G0034567.1 mouse_genomes_project 9 35347044 35347980 + MGP_BALBcJ_P0091819 Olfr901 protein_coding protein_coding MGP_BALBcJ_T0009308.1 MGP_BALBcJ_G0007478.1 mouse_genomes_project 9 105160825 105161292 + Gm38150 lincRNA lincRNA MGP_BALBcJ_T0005484.1 MGP_BALBcJ_G0004631.1 mouse_genomes_project 9 94487105 94493179 + Gm16010 antisense antisense MGP_BALBcJ_T0005485.1 MGP_BALBcJ_G0004631.1 mouse_genomes_project 9 94488613 94489585 + Gm16010 antisense antisense MGP_BALBcJ_T0092551.1 MGP_BALBcJ_G0034849.1 mouse_genomes_project 9 54870158 54876798 + MGP_BALBcJ_P0092551 Cyp1a1 protein_coding protein_coding MGP_BALBcJ_T0091504.1 MGP_BALBcJ_G0034454.1 mouse_genomes_project 9 19122686 19182131 - MGP_BALBcJ_P0091504 Anln protein_coding protein_coding MGP_BALBcJ_T0005451.1 MGP_BALBcJ_G0004610.1 mouse_genomes_project 9 69782693 69783383 - Gm27231 antisense antisense MGP_BALBcJ_T0016022.1 MGP_BALBcJ_G0014119.1 mouse_genomes_project 9 60676194 60677104 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009335.1 MGP_BALBcJ_G0007496.1 mouse_genomes_project 9 121003473 121021564 - A530083I20Rik lincRNA lincRNA MGP_BALBcJ_T0009336.1 MGP_BALBcJ_G0007496.1 mouse_genomes_project 9 121013744 121021550 - A530083I20Rik lincRNA lincRNA MGP_BALBcJ_T0002412.1 MGP_BALBcJ_G0002321.1 mouse_genomes_project 9 93499042 93501269 + TEC TEC MGP_BALBcJ_T0094011.1 MGP_BALBcJ_G0035181.1 mouse_genomes_project 9 101852079 101901325 - MGP_BALBcJ_P0094011 Acpp protein_coding protein_coding MGP_BALBcJ_T0094012.1 MGP_BALBcJ_G0035181.1 mouse_genomes_project 9 101854812 101864989 - Acpp protein_coding processed_transcript MGP_BALBcJ_T0094013.1 MGP_BALBcJ_G0035181.1 mouse_genomes_project 9 101862763 101901304 - MGP_BALBcJ_P0094013 Acpp protein_coding protein_coding MGP_BALBcJ_T0094014.1 MGP_BALBcJ_G0035181.1 mouse_genomes_project 9 101870429 101901279 - Acpp protein_coding retained_intron MGP_BALBcJ_T0094015.1 MGP_BALBcJ_G0035181.1 mouse_genomes_project 9 101882679 101901304 - Acpp protein_coding retained_intron MGP_BALBcJ_T0093677.1 MGP_BALBcJ_G0035112.1 mouse_genomes_project 9 93216159 93313508 - MGP_BALBcJ_P0093677 Pls1 protein_coding protein_coding MGP_BALBcJ_T0093678.1 MGP_BALBcJ_G0035112.1 mouse_genomes_project 9 93250977 93285259 - MGP_BALBcJ_P0093678 Pls1 protein_coding protein_coding MGP_BALBcJ_T0093679.1 MGP_BALBcJ_G0035112.1 mouse_genomes_project 9 93252350 93313533 - Pls1 protein_coding processed_transcript MGP_BALBcJ_T0091540.1 MGP_BALBcJ_G0034468.1 mouse_genomes_project 9 23537612 23565235 + MGP_BALBcJ_P0091540 B3gat1 protein_coding protein_coding MGP_BALBcJ_T0091541.1 MGP_BALBcJ_G0034468.1 mouse_genomes_project 9 23537687 23559964 + MGP_BALBcJ_P0091541 B3gat1 protein_coding protein_coding MGP_BALBcJ_T0091542.1 MGP_BALBcJ_G0034468.1 mouse_genomes_project 9 23537708 23566975 + MGP_BALBcJ_P0091542 B3gat1 protein_coding protein_coding MGP_BALBcJ_T0091543.1 MGP_BALBcJ_G0034468.1 mouse_genomes_project 9 23537735 23561867 + MGP_BALBcJ_P0091543 B3gat1 protein_coding protein_coding MGP_BALBcJ_T0091544.1 MGP_BALBcJ_G0034468.1 mouse_genomes_project 9 23555446 23565223 + MGP_BALBcJ_P0091544 B3gat1 protein_coding protein_coding MGP_BALBcJ_T0091545.1 MGP_BALBcJ_G0034468.1 mouse_genomes_project 9 23559168 23566981 + MGP_BALBcJ_P0091545 B3gat1 protein_coding protein_coding MGP_BALBcJ_T0002404.1 MGP_BALBcJ_G0002313.1 mouse_genomes_project 9 88702455 88704929 - TEC TEC MGP_BALBcJ_T0016107.1 MGP_BALBcJ_G0014204.1 mouse_genomes_project 9 98813927 98814333 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0095113.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 112942883 113191840 + MGP_BALBcJ_P0095113 Osbpl10 protein_coding protein_coding MGP_BALBcJ_T0095114.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 112962987 113124824 + MGP_BALBcJ_P0095114 Osbpl10 protein_coding protein_coding MGP_BALBcJ_T0095115.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 112981011 113190790 + MGP_BALBcJ_P0095115 Osbpl10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095116.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 113018157 113031445 + MGP_BALBcJ_P0095116 Osbpl10 protein_coding protein_coding MGP_BALBcJ_T0095117.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 113031411 113190794 + MGP_BALBcJ_P0095117 Osbpl10 protein_coding protein_coding MGP_BALBcJ_T0095118.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 113046143 113177507 + Osbpl10 protein_coding processed_transcript MGP_BALBcJ_T0095119.1 MGP_BALBcJ_G0035373.1 mouse_genomes_project 9 113078213 113175919 + Osbpl10 protein_coding processed_transcript MGP_BALBcJ_T0091316.1 MGP_BALBcJ_G0034383.1 mouse_genomes_project 9 17053477 17057743 + MGP_BALBcJ_P0091316 Olfr39 protein_coding protein_coding MGP_BALBcJ_T0094031.1 MGP_BALBcJ_G0035185.1 mouse_genomes_project 9 102722994 102724729 - MGP_BALBcJ_P0094031 1700080E11Rik protein_coding protein_coding MGP_BALBcJ_T0094032.1 MGP_BALBcJ_G0035185.1 mouse_genomes_project 9 102723948 102724713 - MGP_BALBcJ_P0094032 1700080E11Rik protein_coding protein_coding MGP_BALBcJ_T0101490.1 MGP_BALBcJ_G0039526.1 mouse_genomes_project 9 85396529 85396659 - Gm23176 snoRNA snoRNA MGP_BALBcJ_T0095173.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117184983 117208659 + Dlec1 protein_coding retained_intron MGP_BALBcJ_T0095174.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117184983 117232975 + MGP_BALBcJ_P0095174 Dlec1 protein_coding protein_coding MGP_BALBcJ_T0095175.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117184983 117232423 + MGP_BALBcJ_P0095175 Dlec1 protein_coding protein_coding MGP_BALBcJ_T0095176.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117185014 117218056 + MGP_BALBcJ_P0095176 Dlec1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095177.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117202159 117227644 + Dlec1 protein_coding retained_intron MGP_BALBcJ_T0095178.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117210376 117211594 + Dlec1 protein_coding retained_intron MGP_BALBcJ_T0095179.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117211730 117218054 + Dlec1 protein_coding retained_intron MGP_BALBcJ_T0095180.1 MGP_BALBcJ_G0035387.1 mouse_genomes_project 9 117211881 117213601 + Dlec1 protein_coding retained_intron MGP_BALBcJ_T0005528.1 MGP_BALBcJ_G0004666.1 mouse_genomes_project 9 109387438 109388052 + Gm43236 antisense antisense MGP_BALBcJ_T0009228.1 MGP_BALBcJ_G0007415.1 mouse_genomes_project 9 55646392 55660763 + 4930461G14Rik lincRNA lincRNA MGP_BALBcJ_T0016109.1 MGP_BALBcJ_G0014206.1 mouse_genomes_project 9 98959024 98959387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0005509.1 MGP_BALBcJ_G0004650.1 mouse_genomes_project 9 104988793 104995527 - Gm17141 antisense antisense MGP_BALBcJ_T0091939.1 MGP_BALBcJ_G0034646.1 mouse_genomes_project 9 38953411 39112986 - MGP_BALBcJ_P0091939 Sorl1 protein_coding protein_coding MGP_BALBcJ_T0091940.1 MGP_BALBcJ_G0034646.1 mouse_genomes_project 9 38958423 38961780 - Sorl1 protein_coding retained_intron MGP_BALBcJ_T0091941.1 MGP_BALBcJ_G0034646.1 mouse_genomes_project 9 38964780 38971757 - Sorl1 protein_coding retained_intron MGP_BALBcJ_T0091942.1 MGP_BALBcJ_G0034646.1 mouse_genomes_project 9 38971694 38973024 - Sorl1 protein_coding processed_transcript MGP_BALBcJ_T0093358.1 MGP_BALBcJ_G0035045.1 mouse_genomes_project 9 77185616 77210751 - MGP_BALBcJ_P0093358 Tmem30a protein_coding protein_coding MGP_BALBcJ_T0093359.1 MGP_BALBcJ_G0035045.1 mouse_genomes_project 9 77185616 77210828 - MGP_BALBcJ_P0093359 Tmem30a protein_coding protein_coding MGP_BALBcJ_T0093360.1 MGP_BALBcJ_G0035045.1 mouse_genomes_project 9 77189204 77210751 - Tmem30a protein_coding retained_intron MGP_BALBcJ_T0093361.1 MGP_BALBcJ_G0035045.1 mouse_genomes_project 9 77193506 77210751 - Tmem30a protein_coding retained_intron MGP_BALBcJ_T0091173.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10394298 10450236 + MGP_BALBcJ_P0091173 Mtmr2 protein_coding protein_coding MGP_BALBcJ_T0091174.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10395069 10450236 + MGP_BALBcJ_P0091174 Mtmr2 protein_coding protein_coding MGP_BALBcJ_T0091175.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10395073 10425572 + Mtmr2 protein_coding processed_transcript MGP_BALBcJ_T0091176.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10395085 10450236 + MGP_BALBcJ_P0091176 Mtmr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091177.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10395207 10428086 + MGP_BALBcJ_P0091177 Mtmr2 protein_coding protein_coding MGP_BALBcJ_T0091178.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10395277 10428086 + MGP_BALBcJ_P0091178 Mtmr2 protein_coding protein_coding MGP_BALBcJ_T0091179.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10407954 10435440 + MGP_BALBcJ_P0091179 Mtmr2 protein_coding protein_coding MGP_BALBcJ_T0091180.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10408717 10428084 + Mtmr2 protein_coding processed_transcript MGP_BALBcJ_T0091181.1 MGP_BALBcJ_G0034316.1 mouse_genomes_project 9 10439373 10450235 + Mtmr2 protein_coding retained_intron MGP_BALBcJ_T0009191.1 MGP_BALBcJ_G0007383.1 mouse_genomes_project 9 18856902 18872107 + Gm16845 lincRNA lincRNA MGP_BALBcJ_T0095285.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833336 119871338 + MGP_BALBcJ_P0095285 Nktr protein_coding protein_coding MGP_BALBcJ_T0095286.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833338 119857126 + MGP_BALBcJ_P0095286 Nktr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095287.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833369 119845976 + MGP_BALBcJ_P0095287 Nktr protein_coding unknown_likely_coding MGP_BALBcJ_T0095288.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833375 119855642 + MGP_BALBcJ_P0095288 Nktr protein_coding protein_coding MGP_BALBcJ_T0095289.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833377 119844509 + Nktr protein_coding retained_intron MGP_BALBcJ_T0095290.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833403 119849941 + Nktr protein_coding retained_intron MGP_BALBcJ_T0095291.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833458 119834187 + Nktr protein_coding processed_transcript MGP_BALBcJ_T0095292.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833575 119864331 + MGP_BALBcJ_P0095292 Nktr protein_coding protein_coding MGP_BALBcJ_T0095293.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119833958 119846010 + MGP_BALBcJ_P0095293 Nktr protein_coding protein_coding MGP_BALBcJ_T0095294.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119843893 119846078 + Nktr protein_coding retained_intron MGP_BALBcJ_T0095295.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119845641 119857162 + Nktr protein_coding retained_intron MGP_BALBcJ_T0095296.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119865276 119868887 + MGP_BALBcJ_P0095296 Nktr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095297.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119865705 119867138 + Nktr protein_coding retained_intron MGP_BALBcJ_T0095298.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119866157 119869348 + MGP_BALBcJ_P0095298 Nktr protein_coding protein_coding MGP_BALBcJ_T0095299.1 MGP_BALBcJ_G0035424.1 mouse_genomes_project 9 119867017 119868847 + Nktr protein_coding retained_intron MGP_BALBcJ_T0092469.1 MGP_BALBcJ_G0034818.1 mouse_genomes_project 9 53080801 53092893 - MGP_BALBcJ_P0092469 4930563M21Rik protein_coding protein_coding MGP_BALBcJ_T0018556.1 MGP_BALBcJ_G0015702.1 mouse_genomes_project 9 115298296 115300453 + Gm17396 processed_transcript processed_transcript MGP_BALBcJ_T0092221.1 MGP_BALBcJ_G0034736.1 mouse_genomes_project 9 45688116 45695205 - Nnmt protein_coding processed_transcript MGP_BALBcJ_T0092222.1 MGP_BALBcJ_G0034736.1 mouse_genomes_project 9 45688116 45703336 - MGP_BALBcJ_P0092222 Nnmt protein_coding protein_coding MGP_BALBcJ_T0092223.1 MGP_BALBcJ_G0034736.1 mouse_genomes_project 9 45688116 45703336 - MGP_BALBcJ_P0092223 Nnmt protein_coding protein_coding MGP_BALBcJ_T0092224.1 MGP_BALBcJ_G0034736.1 mouse_genomes_project 9 45688130 45695279 - Nnmt protein_coding processed_transcript MGP_BALBcJ_T0092225.1 MGP_BALBcJ_G0034736.1 mouse_genomes_project 9 45701488 45703260 - Nnmt protein_coding retained_intron MGP_BALBcJ_T0091842.1 MGP_BALBcJ_G0034584.1 mouse_genomes_project 9 35707978 35711247 + MGP_BALBcJ_P0091842 Olfr921 protein_coding protein_coding MGP_BALBcJ_T0094803.1 MGP_BALBcJ_G0035311.1 mouse_genomes_project 9 107366450 107387740 - MGP_BALBcJ_P0094803 Fbxw25 protein_coding protein_coding MGP_BALBcJ_T0002439.1 MGP_BALBcJ_G0002348.1 mouse_genomes_project 9 100994089 100994407 + TEC TEC MGP_BALBcJ_T0005531.1 MGP_BALBcJ_G0004669.1 mouse_genomes_project 9 113153608 113155064 - Gm26962 antisense antisense MGP_BALBcJ_T0092178.1 MGP_BALBcJ_G0034720.1 mouse_genomes_project 9 43295875 43297774 + MGP_BALBcJ_P0092178 Apoa1 protein_coding protein_coding MGP_BALBcJ_T0092179.1 MGP_BALBcJ_G0034720.1 mouse_genomes_project 9 43296016 43297281 + Apoa1 protein_coding retained_intron MGP_BALBcJ_T0009264.1 MGP_BALBcJ_G0007443.1 mouse_genomes_project 9 81101771 81103513 + Gm2109 lincRNA lincRNA MGP_BALBcJ_T0009205.1 MGP_BALBcJ_G0007396.1 mouse_genomes_project 9 32837349 32846141 - Gm27187 lincRNA lincRNA MGP_BALBcJ_T0009206.1 MGP_BALBcJ_G0007396.1 mouse_genomes_project 9 32837396 32846255 - Gm27187 lincRNA lincRNA MGP_BALBcJ_T0093192.1 MGP_BALBcJ_G0034998.1 mouse_genomes_project 9 70396922 70449907 + MGP_BALBcJ_P0093192 Rab27a protein_coding protein_coding MGP_BALBcJ_T0093193.1 MGP_BALBcJ_G0034998.1 mouse_genomes_project 9 70396925 70449871 + MGP_BALBcJ_P0093193 Rab27a protein_coding protein_coding MGP_BALBcJ_T0093194.1 MGP_BALBcJ_G0034998.1 mouse_genomes_project 9 70397052 70437198 + Rab27a protein_coding retained_intron MGP_BALBcJ_T0093195.1 MGP_BALBcJ_G0034998.1 mouse_genomes_project 9 70447115 70448696 + Rab27a protein_coding retained_intron MGP_BALBcJ_T0009292.1 MGP_BALBcJ_G0007464.1 mouse_genomes_project 9 97541002 97554631 + 4930519F24Rik lincRNA lincRNA MGP_BALBcJ_T0016117.1 MGP_BALBcJ_G0014214.1 mouse_genomes_project 9 103108927 103109330 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092104.1 MGP_BALBcJ_G0034697.1 mouse_genomes_project 9 42033620 42039276 + MGP_BALBcJ_P0092104 Cd3d protein_coding protein_coding MGP_BALBcJ_T0095106.1 MGP_BALBcJ_G0035369.1 mouse_genomes_project 9 112704429 112722390 + MGP_BALBcJ_P0095106 Cmtm6 protein_coding protein_coding MGP_BALBcJ_T0009291.1 MGP_BALBcJ_G0007463.1 mouse_genomes_project 9 96858876 96860322 + Gm28087 lincRNA lincRNA MGP_BALBcJ_T0091306.1 MGP_BALBcJ_G0034373.1 mouse_genomes_project 9 16598960 16599889 - MGP_BALBcJ_P0091306 protein_coding protein_coding MGP_BALBcJ_T0092546.1 MGP_BALBcJ_G0034845.1 mouse_genomes_project 9 54771184 54777441 - MGP_BALBcJ_P0092546 Cplx3 protein_coding protein_coding MGP_BALBcJ_T0011017.1 MGP_BALBcJ_G0009142.1 mouse_genomes_project 9 6601102 6601193 + Mir6237 miRNA miRNA MGP_BALBcJ_T0098414.1 MGP_BALBcJ_G0036468.1 mouse_genomes_project 9 41409189 41410201 - pseudogene pseudogene MGP_BALBcJ_T0091885.1 MGP_BALBcJ_G0034621.1 mouse_genomes_project 9 36841061 36841985 + MGP_BALBcJ_P0091885 Olfr971 protein_coding protein_coding MGP_BALBcJ_T0095244.1 MGP_BALBcJ_G0035414.1 mouse_genomes_project 9 118690819 118693957 + MGP_BALBcJ_P0095244 Rpl14 protein_coding protein_coding MGP_BALBcJ_T0092752.1 MGP_BALBcJ_G0034897.1 mouse_genomes_project 9 60071386 60096728 + MGP_BALBcJ_P0092752 Cln6 protein_coding protein_coding MGP_BALBcJ_T0092753.1 MGP_BALBcJ_G0034897.1 mouse_genomes_project 9 60071393 60090740 + MGP_BALBcJ_P0092753 Cln6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092756.1 MGP_BALBcJ_G0034897.1 mouse_genomes_project 9 60090736 60095433 + MGP_BALBcJ_P0092756 Cln6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092757.1 MGP_BALBcJ_G0034897.1 mouse_genomes_project 9 60091754 60095884 + MGP_BALBcJ_P0092757 Cln6 protein_coding protein_coding MGP_BALBcJ_T0094648.1 MGP_BALBcJ_G0035281.1 mouse_genomes_project 9 106190553 106210545 - MGP_BALBcJ_P0094648 P4htm protein_coding protein_coding MGP_BALBcJ_T0094649.1 MGP_BALBcJ_G0035281.1 mouse_genomes_project 9 106190870 106191249 - P4htm protein_coding processed_transcript MGP_BALBcJ_T0094650.1 MGP_BALBcJ_G0035281.1 mouse_genomes_project 9 106192280 106194627 - P4htm protein_coding retained_intron MGP_BALBcJ_T0094651.1 MGP_BALBcJ_G0035281.1 mouse_genomes_project 9 106193241 106210454 - P4htm protein_coding retained_intron MGP_BALBcJ_T0094652.1 MGP_BALBcJ_G0035281.1 mouse_genomes_project 9 106194681 106210458 - MGP_BALBcJ_P0094652 P4htm protein_coding protein_coding MGP_BALBcJ_T0094653.1 MGP_BALBcJ_G0035281.1 mouse_genomes_project 9 106194681 106210224 - MGP_BALBcJ_P0094653 P4htm protein_coding protein_coding MGP_BALBcJ_T0093362.1 MGP_BALBcJ_G0035046.1 mouse_genomes_project 9 77233593 77390801 - MGP_BALBcJ_P0093362 Filip1 protein_coding protein_coding MGP_BALBcJ_T0093363.1 MGP_BALBcJ_G0035046.1 mouse_genomes_project 9 77233599 77249446 - Filip1 protein_coding processed_transcript MGP_BALBcJ_T0093364.1 MGP_BALBcJ_G0035046.1 mouse_genomes_project 9 77239203 77375094 - MGP_BALBcJ_P0093364 Filip1 protein_coding protein_coding MGP_BALBcJ_T0091315.1 MGP_BALBcJ_G0034382.1 mouse_genomes_project 9 16943453 16944457 - MGP_BALBcJ_P0091315 protein_coding protein_coding MGP_BALBcJ_T0094981.1 MGP_BALBcJ_G0035340.1 mouse_genomes_project 9 108739939 108742052 - MGP_BALBcJ_P0094981 Gm590 protein_coding protein_coding MGP_BALBcJ_T0095336.1 MGP_BALBcJ_G0035440.1 mouse_genomes_project 9 120946611 120952959 - MGP_BALBcJ_P0095336 Gm35549 protein_coding protein_coding MGP_BALBcJ_T0095337.1 MGP_BALBcJ_G0035440.1 mouse_genomes_project 9 120946611 120952959 - MGP_BALBcJ_P0095337 Gm35549 protein_coding protein_coding MGP_BALBcJ_T0095338.1 MGP_BALBcJ_G0035440.1 mouse_genomes_project 9 120946611 120952959 - MGP_BALBcJ_P0095338 Gm35549 protein_coding protein_coding MGP_BALBcJ_T0011721.1 MGP_BALBcJ_G0009846.1 mouse_genomes_project 9 75583363 75583694 - Rn7sk misc_RNA misc_RNA MGP_BALBcJ_T0009212.1 MGP_BALBcJ_G0007402.1 mouse_genomes_project 9 41152354 41165407 - Gm10687 lincRNA lincRNA MGP_BALBcJ_T0095222.1 MGP_BALBcJ_G0035406.1 mouse_genomes_project 9 118153097 118172355 - MGP_BALBcJ_P0095222 Cx3cr1 protein_coding protein_coding MGP_BALBcJ_T0095223.1 MGP_BALBcJ_G0035406.1 mouse_genomes_project 9 118153103 118172354 - MGP_BALBcJ_P0095223 Cx3cr1 protein_coding protein_coding MGP_BALBcJ_T0092759.1 MGP_BALBcJ_G0034900.1 mouse_genomes_project 9 60372147 60382939 - MGP_BALBcJ_P0092759 Skor1 protein_coding protein_coding MGP_BALBcJ_T0092760.1 MGP_BALBcJ_G0034900.1 mouse_genomes_project 9 60372147 60380989 - MGP_BALBcJ_P0092760 Skor1 protein_coding protein_coding MGP_BALBcJ_T0092761.1 MGP_BALBcJ_G0034900.1 mouse_genomes_project 9 60372153 60380958 - MGP_BALBcJ_P0092761 Skor1 protein_coding protein_coding MGP_BALBcJ_T0094828.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107722916 107880485 + MGP_BALBcJ_P0094828 Map4 protein_coding protein_coding MGP_BALBcJ_T0094829.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107723256 107800346 + MGP_BALBcJ_P0094829 Map4 protein_coding protein_coding MGP_BALBcJ_T0094830.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107723320 107880477 + MGP_BALBcJ_P0094830 Map4 protein_coding protein_coding MGP_BALBcJ_T0094831.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107762580 107797888 + Map4 protein_coding processed_transcript MGP_BALBcJ_T0094832.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107832071 107869327 + MGP_BALBcJ_P0094832 Map4 protein_coding protein_coding MGP_BALBcJ_T0094833.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107847278 107880476 + MGP_BALBcJ_P0094833 Map4 protein_coding protein_coding MGP_BALBcJ_T0094834.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107847282 107879703 + MGP_BALBcJ_P0094834 Map4 protein_coding protein_coding MGP_BALBcJ_T0094835.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107847300 107880483 + MGP_BALBcJ_P0094835 Map4 protein_coding protein_coding MGP_BALBcJ_T0094836.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107858047 107865374 + Map4 protein_coding processed_transcript MGP_BALBcJ_T0094837.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107864205 107878617 + MGP_BALBcJ_P0094837 Map4 protein_coding protein_coding MGP_BALBcJ_T0094838.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107864205 107879027 + MGP_BALBcJ_P0094838 Map4 protein_coding protein_coding MGP_BALBcJ_T0094839.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107865445 107878325 + MGP_BALBcJ_P0094839 Map4 protein_coding protein_coding MGP_BALBcJ_T0094840.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107865469 107878444 + MGP_BALBcJ_P0094840 Map4 protein_coding protein_coding MGP_BALBcJ_T0094841.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107874128 107876565 + Map4 protein_coding retained_intron MGP_BALBcJ_T0094842.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107874577 107878680 + MGP_BALBcJ_P0094842 Map4 protein_coding protein_coding MGP_BALBcJ_T0094843.1 MGP_BALBcJ_G0035316.1 mouse_genomes_project 9 107876329 107879027 + MGP_BALBcJ_P0094843 Map4 protein_coding protein_coding MGP_BALBcJ_T0093270.1 MGP_BALBcJ_G0035021.1 mouse_genomes_project 9 73569982 73681810 - MGP_BALBcJ_P0093270 Hcrtr2 protein_coding protein_coding MGP_BALBcJ_T0093271.1 MGP_BALBcJ_G0035021.1 mouse_genomes_project 9 73574439 73682055 - MGP_BALBcJ_P0093271 Hcrtr2 protein_coding protein_coding MGP_BALBcJ_T0093272.1 MGP_BALBcJ_G0035021.1 mouse_genomes_project 9 73679875 73681521 - Hcrtr2 protein_coding retained_intron MGP_BALBcJ_T0100199.1 MGP_BALBcJ_G0038235.1 mouse_genomes_project 9 67861330 67861429 + Gm23588 snRNA snRNA MGP_BALBcJ_T0093621.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88793020 88808558 + MGP_BALBcJ_P0093621 Zic4 protein_coding protein_coding MGP_BALBcJ_T0093622.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88798077 88798843 + Zic4 protein_coding processed_transcript MGP_BALBcJ_T0093623.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88798521 88808900 + MGP_BALBcJ_P0093623 Zic4 protein_coding protein_coding MGP_BALBcJ_T0093624.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88798603 88810625 + Zic4 protein_coding retained_intron MGP_BALBcJ_T0093625.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88798679 88817814 + MGP_BALBcJ_P0093625 Zic4 protein_coding protein_coding MGP_BALBcJ_T0093626.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88799205 88809183 + Zic4 protein_coding retained_intron MGP_BALBcJ_T0093627.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88800711 88808832 + MGP_BALBcJ_P0093627 Zic4 protein_coding protein_coding MGP_BALBcJ_T0093628.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88800920 88816979 + MGP_BALBcJ_P0093628 Zic4 protein_coding protein_coding MGP_BALBcJ_T0093629.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88801057 88803630 + Zic4 protein_coding retained_intron MGP_BALBcJ_T0093630.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88807839 88814401 + Zic4 protein_coding retained_intron MGP_BALBcJ_T0093631.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88808284 88819361 + MGP_BALBcJ_P0093631 Zic4 protein_coding protein_coding MGP_BALBcJ_T0093632.1 MGP_BALBcJ_G0035098.1 mouse_genomes_project 9 88812412 88818065 + Zic4 protein_coding processed_transcript MGP_BALBcJ_T0091643.1 MGP_BALBcJ_G0034497.1 mouse_genomes_project 9 31932179 31982935 - MGP_BALBcJ_P0091643 St3gal4 protein_coding protein_coding MGP_BALBcJ_T0009200.1 MGP_BALBcJ_G0007392.1 mouse_genomes_project 9 30918340 30935105 + 7630403G23Rik lincRNA lincRNA MGP_BALBcJ_T0005425.1 MGP_BALBcJ_G0004593.1 mouse_genomes_project 9 50792158 50806378 + Gm16124 antisense antisense MGP_BALBcJ_T0091492.1 MGP_BALBcJ_G0034447.1 mouse_genomes_project 9 18899146 18900327 - MGP_BALBcJ_P0091492 Elof1 protein_coding protein_coding MGP_BALBcJ_T0091493.1 MGP_BALBcJ_G0034447.1 mouse_genomes_project 9 18899147 18903306 - MGP_BALBcJ_P0091493 Elof1 protein_coding protein_coding MGP_BALBcJ_T0091300.1 MGP_BALBcJ_G0034367.1 mouse_genomes_project 9 16279104 16281288 - MGP_BALBcJ_P0091300 Olfr853 protein_coding protein_coding MGP_BALBcJ_T0094410.1 MGP_BALBcJ_G0035244.1 mouse_genomes_project 9 105462199 105477187 + MGP_BALBcJ_P0094410 Mon1a protein_coding protein_coding MGP_BALBcJ_T0094411.1 MGP_BALBcJ_G0035244.1 mouse_genomes_project 9 105462230 105477192 + MGP_BALBcJ_P0094411 Mon1a protein_coding protein_coding MGP_BALBcJ_T0094305.1 MGP_BALBcJ_G0035235.1 mouse_genomes_project 9 105147102 105153129 + MGP_BALBcJ_P0094305 Hyal3 protein_coding protein_coding MGP_BALBcJ_T0094306.1 MGP_BALBcJ_G0035235.1 mouse_genomes_project 9 105147577 105153681 + MGP_BALBcJ_P0094306 Hyal3 protein_coding protein_coding MGP_BALBcJ_T0094307.1 MGP_BALBcJ_G0035235.1 mouse_genomes_project 9 105151040 105152958 + MGP_BALBcJ_P0094307 Hyal3 protein_coding protein_coding MGP_BALBcJ_T0092539.1 MGP_BALBcJ_G0034842.1 mouse_genomes_project 9 54714202 54722710 - MGP_BALBcJ_P0092539 Mpi protein_coding protein_coding MGP_BALBcJ_T0092540.1 MGP_BALBcJ_G0034842.1 mouse_genomes_project 9 54718203 54722213 - Mpi protein_coding retained_intron MGP_BALBcJ_T0092541.1 MGP_BALBcJ_G0034842.1 mouse_genomes_project 9 54718536 54719619 - Mpi protein_coding retained_intron MGP_BALBcJ_T0092542.1 MGP_BALBcJ_G0034842.1 mouse_genomes_project 9 54719076 54722656 - MGP_BALBcJ_P0092542 Mpi protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092543.1 MGP_BALBcJ_G0034842.1 mouse_genomes_project 9 54719922 54722663 - Mpi protein_coding retained_intron MGP_BALBcJ_T0093215.1 MGP_BALBcJ_G0035005.1 mouse_genomes_project 9 72286570 72365431 + MGP_BALBcJ_P0093215 Fam214a protein_coding protein_coding MGP_BALBcJ_T0093216.1 MGP_BALBcJ_G0035005.1 mouse_genomes_project 9 72309344 72365431 + MGP_BALBcJ_P0093216 Fam214a protein_coding protein_coding MGP_BALBcJ_T0005521.1 MGP_BALBcJ_G0004659.1 mouse_genomes_project 9 105586891 105601047 - antisense antisense MGP_BALBcJ_T0091681.1 MGP_BALBcJ_G0034504.1 mouse_genomes_project 9 32281591 32316112 + MGP_BALBcJ_P0091681 Cdon protein_coding protein_coding MGP_BALBcJ_T0091682.1 MGP_BALBcJ_G0034504.1 mouse_genomes_project 9 32282017 32316087 + MGP_BALBcJ_P0091682 Cdon protein_coding nonsense_mediated_decay MGP_BALBcJ_T0091683.1 MGP_BALBcJ_G0034504.1 mouse_genomes_project 9 32282060 32374679 + MGP_BALBcJ_P0091683 Cdon protein_coding protein_coding MGP_BALBcJ_T0091684.1 MGP_BALBcJ_G0034504.1 mouse_genomes_project 9 32284058 32334093 + MGP_BALBcJ_P0091684 Cdon protein_coding protein_coding MGP_BALBcJ_T0091685.1 MGP_BALBcJ_G0034504.1 mouse_genomes_project 9 32312820 32374678 + MGP_BALBcJ_P0091685 Cdon protein_coding protein_coding MGP_BALBcJ_T0091686.1 MGP_BALBcJ_G0034504.1 mouse_genomes_project 9 32318190 32333022 + MGP_BALBcJ_P0091686 Cdon protein_coding protein_coding MGP_BALBcJ_T0092660.1 MGP_BALBcJ_G0034878.1 mouse_genomes_project 9 56881146 56915540 + MGP_BALBcJ_P0092660 Gramd2 protein_coding protein_coding MGP_BALBcJ_T0092661.1 MGP_BALBcJ_G0034878.1 mouse_genomes_project 9 56909253 56920267 + MGP_BALBcJ_P0092661 Gramd2 protein_coding protein_coding MGP_BALBcJ_T0092662.1 MGP_BALBcJ_G0034878.1 mouse_genomes_project 9 56909380 56918041 + MGP_BALBcJ_P0092662 Gramd2 protein_coding protein_coding MGP_BALBcJ_T0092663.1 MGP_BALBcJ_G0034878.1 mouse_genomes_project 9 56911773 56915458 + Gramd2 protein_coding retained_intron MGP_BALBcJ_T0092664.1 MGP_BALBcJ_G0034878.1 mouse_genomes_project 9 56912797 56917931 + MGP_BALBcJ_P0092664 Gramd2 protein_coding protein_coding MGP_BALBcJ_T0092665.1 MGP_BALBcJ_G0034878.1 mouse_genomes_project 9 56915732 56920267 + Gramd2 protein_coding retained_intron MGP_BALBcJ_T0091276.1 MGP_BALBcJ_G0034346.1 mouse_genomes_project 9 15168364 15171207 + MGP_BALBcJ_P0091276 Mbd3l2 protein_coding protein_coding MGP_BALBcJ_T0094037.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102961467 102971788 + MGP_BALBcJ_P0094037 Aste1 protein_coding protein_coding MGP_BALBcJ_T0094038.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102961475 102968222 + Aste1 protein_coding retained_intron MGP_BALBcJ_T0094039.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102961490 102971497 + Aste1 protein_coding retained_intron MGP_BALBcJ_T0094040.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102961619 102967692 + MGP_BALBcJ_P0094040 Aste1 protein_coding protein_coding MGP_BALBcJ_T0094041.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102963295 102971203 + MGP_BALBcJ_P0094041 Aste1 protein_coding protein_coding MGP_BALBcJ_T0094042.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102963893 102971358 + MGP_BALBcJ_P0094042 Aste1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094043.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102963893 102976602 + MGP_BALBcJ_P0094043 Aste1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094044.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102966869 102971358 + Aste1 protein_coding processed_transcript MGP_BALBcJ_T0094045.1 MGP_BALBcJ_G0035187.1 mouse_genomes_project 9 102967553 102971788 + MGP_BALBcJ_P0094045 Aste1 protein_coding protein_coding MGP_BALBcJ_T0093568.1 MGP_BALBcJ_G0035085.1 mouse_genomes_project 9 86640414 86641493 + MGP_BALBcJ_P0093568 protein_coding protein_coding MGP_BALBcJ_T0011029.1 MGP_BALBcJ_G0009154.1 mouse_genomes_project 9 18900101 18900171 - Mir7084 miRNA miRNA MGP_BALBcJ_T0092749.1 MGP_BALBcJ_G0034895.1 mouse_genomes_project 9 59896504 60013942 + MGP_BALBcJ_P0092749 Itga11 protein_coding protein_coding MGP_BALBcJ_T0092750.1 MGP_BALBcJ_G0034895.1 mouse_genomes_project 9 59896538 60007071 + Itga11 protein_coding retained_intron MGP_BALBcJ_T0101469.1 MGP_BALBcJ_G0039505.1 mouse_genomes_project 9 57620037 57620160 + Gm22099 snoRNA snoRNA MGP_BALBcJ_T0094884.1 MGP_BALBcJ_G0035320.1 mouse_genomes_project 9 108103660 108121511 + MGP_BALBcJ_P0094884 Elp6 protein_coding protein_coding MGP_BALBcJ_T0094885.1 MGP_BALBcJ_G0035320.1 mouse_genomes_project 9 108103691 108122290 + MGP_BALBcJ_P0094885 Elp6 protein_coding protein_coding MGP_BALBcJ_T0094886.1 MGP_BALBcJ_G0035320.1 mouse_genomes_project 9 108103727 108119760 + MGP_BALBcJ_P0094886 Elp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094887.1 MGP_BALBcJ_G0035320.1 mouse_genomes_project 9 108103983 108116112 + MGP_BALBcJ_P0094887 Elp6 protein_coding protein_coding MGP_BALBcJ_T0094888.1 MGP_BALBcJ_G0035320.1 mouse_genomes_project 9 108110003 108114332 + Elp6 protein_coding retained_intron MGP_BALBcJ_T0093658.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92911074 92969989 - MGP_BALBcJ_P0093658 U2surp protein_coding protein_coding MGP_BALBcJ_T0093659.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92915150 92970091 - MGP_BALBcJ_P0093659 U2surp protein_coding protein_coding MGP_BALBcJ_T0093660.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92915531 92970090 - MGP_BALBcJ_P0093660 U2surp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093661.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92915582 92969956 - MGP_BALBcJ_P0093661 U2surp protein_coding unknown_likely_coding MGP_BALBcJ_T0093662.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92934043 92938255 - U2surp protein_coding retained_intron MGP_BALBcJ_T0093663.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92949042 92969954 - MGP_BALBcJ_P0093663 U2surp protein_coding protein_coding MGP_BALBcJ_T0093664.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92949547 92969951 - MGP_BALBcJ_P0093664 U2surp protein_coding protein_coding MGP_BALBcJ_T0093665.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92960130 92969980 - U2surp protein_coding retained_intron MGP_BALBcJ_T0093666.1 MGP_BALBcJ_G0035108.1 mouse_genomes_project 9 92967128 92969974 - U2surp protein_coding retained_intron MGP_BALBcJ_T0005415.1 MGP_BALBcJ_G0004588.1 mouse_genomes_project 9 42924617 42926206 - Gm16536 antisense antisense MGP_BALBcJ_T0016073.1 MGP_BALBcJ_G0014170.1 mouse_genomes_project 9 87195711 87196174 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0091381.1 MGP_BALBcJ_G0034400.1 mouse_genomes_project 9 17662381 17666630 - MGP_BALBcJ_P0091381 Eif3g protein_coding protein_coding MGP_BALBcJ_T0016032.1 MGP_BALBcJ_G0014129.1 mouse_genomes_project 9 69622734 69623179 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092232.1 MGP_BALBcJ_G0034741.1 mouse_genomes_project 9 46162828 46185490 + MGP_BALBcJ_P0092232 Zw10 protein_coding protein_coding MGP_BALBcJ_T0005426.1 MGP_BALBcJ_G0004594.1 mouse_genomes_project 9 51380290 51409475 - Gldnos antisense antisense MGP_BALBcJ_T0091238.1 MGP_BALBcJ_G0034336.1 mouse_genomes_project 9 11993552 11999443 + MGP_BALBcJ_P0091238 Taf1d protein_coding protein_coding MGP_BALBcJ_T0091239.1 MGP_BALBcJ_G0034336.1 mouse_genomes_project 9 11993552 11999443 + MGP_BALBcJ_P0091239 Taf1d protein_coding protein_coding MGP_BALBcJ_T0009187.1 MGP_BALBcJ_G0007379.1 mouse_genomes_project 9 17378026 17382740 - Gm26521 lincRNA lincRNA MGP_BALBcJ_T0002448.1 MGP_BALBcJ_G0002357.1 mouse_genomes_project 9 103672532 103675498 + TEC TEC MGP_BALBcJ_T0002421.1 MGP_BALBcJ_G0002330.1 mouse_genomes_project 9 97690198 97691348 - TEC TEC MGP_BALBcJ_T0091591.1 MGP_BALBcJ_G0034482.1 mouse_genomes_project 9 27730805 27754049 - MGP_BALBcJ_P0091591 Adamts15 protein_coding protein_coding MGP_BALBcJ_T0091788.1 MGP_BALBcJ_G0034541.1 mouse_genomes_project 9 34532077 34540267 - Tbrg1 protein_coding retained_intron MGP_BALBcJ_T0091789.1 MGP_BALBcJ_G0034541.1 mouse_genomes_project 9 34532077 34540366 - MGP_BALBcJ_P0091789 Tbrg1 protein_coding protein_coding MGP_BALBcJ_T0091790.1 MGP_BALBcJ_G0034541.1 mouse_genomes_project 9 34534811 34540212 - Tbrg1 protein_coding retained_intron MGP_BALBcJ_T0091791.1 MGP_BALBcJ_G0034541.1 mouse_genomes_project 9 34536958 34540222 - Tbrg1 protein_coding retained_intron MGP_BALBcJ_T0011731.1 MGP_BALBcJ_G0009856.1 mouse_genomes_project 9 118915421 118915742 - Gm23624 misc_RNA misc_RNA MGP_BALBcJ_T0002467.1 MGP_BALBcJ_G0002376.1 mouse_genomes_project 9 109236611 109238091 + TEC TEC MGP_BALBcJ_T0005532.1 MGP_BALBcJ_G0004670.1 mouse_genomes_project 9 113962733 113973702 - Gm16142 antisense antisense MGP_BALBcJ_T0095300.1 MGP_BALBcJ_G0035425.1 mouse_genomes_project 9 119874526 119886235 + MGP_BALBcJ_P0095300 Zfp651 protein_coding protein_coding MGP_BALBcJ_T0094712.1 MGP_BALBcJ_G0035289.1 mouse_genomes_project 9 106484797 106485742 + MGP_BALBcJ_P0094712 Tmem89 protein_coding protein_coding MGP_BALBcJ_T0094713.1 MGP_BALBcJ_G0035289.1 mouse_genomes_project 9 106484797 106485742 + MGP_BALBcJ_P0094713 Tmem89 protein_coding protein_coding MGP_BALBcJ_T0005438.1 MGP_BALBcJ_G0004601.1 mouse_genomes_project 9 57152583 57160290 + Gm7616 antisense antisense MGP_BALBcJ_T0094879.1 MGP_BALBcJ_G0035319.1 mouse_genomes_project 9 108043282 108059263 + MGP_BALBcJ_P0094879 Cspg5 protein_coding protein_coding MGP_BALBcJ_T0094880.1 MGP_BALBcJ_G0035319.1 mouse_genomes_project 9 108043282 108059264 + MGP_BALBcJ_P0094880 Cspg5 protein_coding protein_coding MGP_BALBcJ_T0094881.1 MGP_BALBcJ_G0035319.1 mouse_genomes_project 9 108044982 108047105 + Cspg5 protein_coding retained_intron MGP_BALBcJ_T0094882.1 MGP_BALBcJ_G0035319.1 mouse_genomes_project 9 108045030 108059251 + MGP_BALBcJ_P0094882 Cspg5 protein_coding protein_coding MGP_BALBcJ_T0094883.1 MGP_BALBcJ_G0035319.1 mouse_genomes_project 9 108045564 108059263 + MGP_BALBcJ_P0094883 Cspg5 protein_coding protein_coding MGP_BALBcJ_T0091116.1 MGP_BALBcJ_G0034295.1 mouse_genomes_project 9 4202763 4211100 + MGP_BALBcJ_P0091116 Mmp10 protein_coding protein_coding MGP_BALBcJ_T0009198.1 MGP_BALBcJ_G0007390.1 mouse_genomes_project 9 29898969 29950732 + lincRNA lincRNA MGP_BALBcJ_T0091705.1 MGP_BALBcJ_G0034516.1 mouse_genomes_project 9 32784255 32786970 + 9230113P08Rik protein_coding retained_intron MGP_BALBcJ_T0091706.1 MGP_BALBcJ_G0034516.1 mouse_genomes_project 9 32784274 32785368 + MGP_BALBcJ_P0091706 9230113P08Rik protein_coding protein_coding MGP_BALBcJ_T0092241.1 MGP_BALBcJ_G0034746.1 mouse_genomes_project 9 46545785 46597457 - MGP_BALBcJ_P0092241 Ttc12 protein_coding protein_coding MGP_BALBcJ_T0092242.1 MGP_BALBcJ_G0034746.1 mouse_genomes_project 9 46567360 46597447 - Ttc12 protein_coding retained_intron MGP_BALBcJ_T0091282.1 MGP_BALBcJ_G0034349.1 mouse_genomes_project 9 15216765 15230699 - MGP_BALBcJ_P0091282 protein_coding protein_coding MGP_BALBcJ_T0091571.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 24620715 24621459 + Opcml protein_coding processed_transcript MGP_BALBcJ_T0091572.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 24620887 25766485 + MGP_BALBcJ_P0091572 Opcml protein_coding protein_coding MGP_BALBcJ_T0091573.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 24621242 24856968 + Opcml protein_coding processed_transcript MGP_BALBcJ_T0091574.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 25237258 25240061 + Opcml protein_coding processed_transcript MGP_BALBcJ_T0091575.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 25237906 25762137 + MGP_BALBcJ_P0091575 Opcml protein_coding protein_coding MGP_BALBcJ_T0091576.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 25238192 25654122 + Opcml protein_coding retained_intron MGP_BALBcJ_T0091577.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 25238278 25487408 + Opcml protein_coding processed_transcript MGP_BALBcJ_T0091578.1 MGP_BALBcJ_G0034479.1 mouse_genomes_project 9 25498661 25512219 + Opcml protein_coding processed_transcript MGP_BALBcJ_T0011063.1 MGP_BALBcJ_G0009188.1 mouse_genomes_project 9 74971066 74971140 + Gm25250 miRNA miRNA MGP_BALBcJ_T0094504.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105687661 105696704 - MGP_BALBcJ_P0094504 Apeh protein_coding protein_coding MGP_BALBcJ_T0094505.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105687671 105688286 - Apeh protein_coding retained_intron MGP_BALBcJ_T0094506.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105687671 105696724 - Apeh protein_coding retained_intron MGP_BALBcJ_T0094507.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105688171 105688726 - Apeh protein_coding retained_intron MGP_BALBcJ_T0094508.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105688405 105690778 - Apeh protein_coding retained_intron MGP_BALBcJ_T0094509.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105689033 105696734 - Apeh protein_coding retained_intron MGP_BALBcJ_T0094510.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105694601 105696278 - Apeh protein_coding retained_intron MGP_BALBcJ_T0094511.1 MGP_BALBcJ_G0035259.1 mouse_genomes_project 9 105694880 105696737 - MGP_BALBcJ_P0094511 Apeh protein_coding protein_coding MGP_BALBcJ_T0094225.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104818825 104854691 - Mapkapk3 protein_coding retained_intron MGP_BALBcJ_T0094226.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104819935 104821182 - Mapkapk3 protein_coding retained_intron MGP_BALBcJ_T0094227.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104820074 104854288 - MGP_BALBcJ_P0094227 Mapkapk3 protein_coding protein_coding MGP_BALBcJ_T0094228.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104820074 104854705 - MGP_BALBcJ_P0094228 Mapkapk3 protein_coding unknown_likely_coding MGP_BALBcJ_T0094229.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104822667 104825812 - Mapkapk3 protein_coding processed_transcript MGP_BALBcJ_T0094230.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104823434 104854723 - Mapkapk3 protein_coding retained_intron MGP_BALBcJ_T0094231.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104828712 104845937 - MGP_BALBcJ_P0094231 Mapkapk3 protein_coding protein_coding MGP_BALBcJ_T0094232.1 MGP_BALBcJ_G0035221.1 mouse_genomes_project 9 104849652 104854723 - Mapkapk3 protein_coding processed_transcript MGP_BALBcJ_T0009290.1 MGP_BALBcJ_G0007462.1 mouse_genomes_project 9 96219083 96285013 - E330023G01Rik lincRNA lincRNA MGP_BALBcJ_T0101483.1 MGP_BALBcJ_G0039519.1 mouse_genomes_project 9 74104790 74104910 - Gm22938 snoRNA snoRNA MGP_BALBcJ_T0091290.1 MGP_BALBcJ_G0034357.1 mouse_genomes_project 9 15772099 15773035 + MGP_BALBcJ_P0091290 Olfr835 protein_coding protein_coding MGP_BALBcJ_T0093729.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94151918 94223987 - MGP_BALBcJ_P0093729 Zbtb38 protein_coding protein_coding MGP_BALBcJ_T0093730.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94154562 94202946 - MGP_BALBcJ_P0093730 Zbtb38 protein_coding protein_coding MGP_BALBcJ_T0093731.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94155394 94189832 - MGP_BALBcJ_P0093731 Zbtb38 protein_coding non_stop_decay MGP_BALBcJ_T0093732.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94156534 94190282 - MGP_BALBcJ_P0093732 Zbtb38 protein_coding protein_coding MGP_BALBcJ_T0093733.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94157613 94189547 - MGP_BALBcJ_P0093733 Zbtb38 protein_coding protein_coding MGP_BALBcJ_T0093734.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94188191 94200308 - Zbtb38 protein_coding processed_transcript MGP_BALBcJ_T0093735.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94201122 94223841 - Zbtb38 protein_coding retained_intron MGP_BALBcJ_T0093736.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94201122 94202614 - Zbtb38 protein_coding processed_transcript MGP_BALBcJ_T0093737.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94202731 94204041 - Zbtb38 protein_coding processed_transcript MGP_BALBcJ_T0093738.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94202828 94203940 - Zbtb38 protein_coding retained_intron MGP_BALBcJ_T0093739.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94218434 94223883 - Zbtb38 protein_coding retained_intron MGP_BALBcJ_T0093740.1 MGP_BALBcJ_G0035120.1 mouse_genomes_project 9 94218636 94223849 - Zbtb38 protein_coding processed_transcript MGP_BALBcJ_T0092040.1 MGP_BALBcJ_G0034681.1 mouse_genomes_project 9 41445895 41453686 - MGP_BALBcJ_P0092040 Ccdc84 protein_coding protein_coding MGP_BALBcJ_T0011022.1 MGP_BALBcJ_G0009147.1 mouse_genomes_project 9 16795494 16795561 + Gm26231 miRNA miRNA MGP_BALBcJ_T0091200.1 MGP_BALBcJ_G0034322.1 mouse_genomes_project 9 11149686 11159648 + MGP_BALBcJ_P0091200 Cwc15 protein_coding protein_coding MGP_BALBcJ_T0093854.1 MGP_BALBcJ_G0035152.1 mouse_genomes_project 9 98072711 98091602 - MGP_BALBcJ_P0093854 Slc35g2 protein_coding protein_coding MGP_BALBcJ_T0093855.1 MGP_BALBcJ_G0035152.1 mouse_genomes_project 9 98072713 98073439 - Slc35g2 protein_coding processed_transcript MGP_BALBcJ_T0091708.1 MGP_BALBcJ_G0034518.1 mouse_genomes_project 9 33318393 33321447 + MGP_BALBcJ_P0091708 Gm7257 protein_coding protein_coding MGP_BALBcJ_T0101491.1 MGP_BALBcJ_G0039527.1 mouse_genomes_project 9 89987001 89987132 - Gm25417 snoRNA snoRNA MGP_BALBcJ_T0091156.1 MGP_BALBcJ_G0034310.1 mouse_genomes_project 9 5709483 5961125 - MGP_BALBcJ_P0091156 Arhgap42 protein_coding protein_coding MGP_BALBcJ_T0091157.1 MGP_BALBcJ_G0034310.1 mouse_genomes_project 9 5712751 5960803 - MGP_BALBcJ_P0091157 Arhgap42 protein_coding unknown_likely_coding MGP_BALBcJ_T0091158.1 MGP_BALBcJ_G0034310.1 mouse_genomes_project 9 5726398 5961125 - Arhgap42 protein_coding retained_intron MGP_BALBcJ_T0091159.1 MGP_BALBcJ_G0034310.1 mouse_genomes_project 9 5863068 5961050 - MGP_BALBcJ_P0091159 Arhgap42 protein_coding protein_coding MGP_BALBcJ_T0092550.1 MGP_BALBcJ_G0034848.1 mouse_genomes_project 9 54849451 54856170 - MGP_BALBcJ_P0092550 Cyp1a2 protein_coding protein_coding MGP_BALBcJ_T0092155.1 MGP_BALBcJ_G0034715.1 mouse_genomes_project 9 42975227 42998611 + MGP_BALBcJ_P0092155 Pcsk7 protein_coding protein_coding MGP_BALBcJ_T0005498.1 MGP_BALBcJ_G0004643.1 mouse_genomes_project 9 103724280 103735110 + D030055H07Rik antisense antisense MGP_BALBcJ_T0005499.1 MGP_BALBcJ_G0004643.1 mouse_genomes_project 9 103730351 103735156 + D030055H07Rik antisense antisense MGP_BALBcJ_T0005500.1 MGP_BALBcJ_G0004643.1 mouse_genomes_project 9 103731739 103735606 + D030055H07Rik antisense antisense MGP_BALBcJ_T0101464.1 MGP_BALBcJ_G0039500.1 mouse_genomes_project 9 41431580 41431699 - Gm26306 snoRNA snoRNA MGP_BALBcJ_T0092027.1 MGP_BALBcJ_G0034676.1 mouse_genomes_project 9 41390225 41403624 - MGP_BALBcJ_P0092027 Vps11 protein_coding protein_coding MGP_BALBcJ_T0016078.1 MGP_BALBcJ_G0014175.1 mouse_genomes_project 9 88182744 88183036 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002459.1 MGP_BALBcJ_G0002368.1 mouse_genomes_project 9 107425555 107428083 + TEC TEC MGP_BALBcJ_T0016135.1 MGP_BALBcJ_G0014232.1 mouse_genomes_project 9 121896637 121896911 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092011.1 MGP_BALBcJ_G0034669.1 mouse_genomes_project 9 41289309 41304635 - MGP_BALBcJ_P0092011 Nlrx1 protein_coding unknown_likely_coding MGP_BALBcJ_T0009276.1 MGP_BALBcJ_G0007453.1 mouse_genomes_project 9 90167764 90203929 + lincRNA lincRNA MGP_BALBcJ_T0009277.1 MGP_BALBcJ_G0007453.1 mouse_genomes_project 9 90169024 90249473 + lincRNA lincRNA MGP_BALBcJ_T0101477.1 MGP_BALBcJ_G0039513.1 mouse_genomes_project 9 65601515 65601645 + Gm22382 snoRNA snoRNA MGP_BALBcJ_T0101499.1 MGP_BALBcJ_G0039535.1 mouse_genomes_project 9 102049341 102049483 - Gm25904 snoRNA snoRNA MGP_BALBcJ_T0005508.1 MGP_BALBcJ_G0004649.1 mouse_genomes_project 9 104865221 104866680 - Gm17041 antisense antisense MGP_BALBcJ_T0101501.1 MGP_BALBcJ_G0039537.1 mouse_genomes_project 9 105561816 105561944 + Gm24944 snoRNA snoRNA MGP_BALBcJ_T0100194.1 MGP_BALBcJ_G0038230.1 mouse_genomes_project 9 63169132 63169236 + Gm23248 snRNA snRNA MGP_BALBcJ_T0005518.1 MGP_BALBcJ_G0004656.1 mouse_genomes_project 9 105509102 105510420 - Gm37974 antisense antisense MGP_BALBcJ_T0091896.1 MGP_BALBcJ_G0034632.1 mouse_genomes_project 9 37068559 37069504 - MGP_BALBcJ_P0091896 Olfr984 protein_coding protein_coding MGP_BALBcJ_T0094481.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653016 105685604 - MGP_BALBcJ_P0094481 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094482.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653154 105681559 - MGP_BALBcJ_P0094482 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094483.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653159 105681998 - Rnf123 protein_coding retained_intron MGP_BALBcJ_T0094484.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653159 105681633 - MGP_BALBcJ_P0094484 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094485.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653159 105681559 - MGP_BALBcJ_P0094485 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094486.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653175 105653713 - Rnf123 protein_coding retained_intron MGP_BALBcJ_T0094487.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653707 105661225 - MGP_BALBcJ_P0094487 Rnf123 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094488.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653716 105681633 - MGP_BALBcJ_P0094488 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094489.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105653724 105654182 - Rnf123 protein_coding retained_intron MGP_BALBcJ_T0094491.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105657381 105681986 - Rnf123 protein_coding retained_intron MGP_BALBcJ_T0094492.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105657548 105658522 - Rnf123 protein_coding retained_intron MGP_BALBcJ_T0094493.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105658042 105661260 - MGP_BALBcJ_P0094493 Rnf123 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0094494.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105659650 105663484 - Rnf123 protein_coding retained_intron MGP_BALBcJ_T0094495.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105672654 105680527 - MGP_BALBcJ_P0094495 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094496.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105672713 105681563 - MGP_BALBcJ_P0094496 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094497.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105672940 105681524 - MGP_BALBcJ_P0094497 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094498.1 MGP_BALBcJ_G0035256.1 mouse_genomes_project 9 105679979 105685602 - MGP_BALBcJ_P0094498 Rnf123 protein_coding protein_coding MGP_BALBcJ_T0094694.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106444325 106470968 + MGP_BALBcJ_P0094694 Celsr3 protein_coding protein_coding MGP_BALBcJ_T0094695.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106445123 106470975 + MGP_BALBcJ_P0094695 Celsr3 protein_coding unknown_likely_coding MGP_BALBcJ_T0094696.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106449745 106450826 + MGP_BALBcJ_P0094696 Celsr3 protein_coding protein_coding MGP_BALBcJ_T0094697.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106452477 106454580 + Celsr3 protein_coding retained_intron MGP_BALBcJ_T0094698.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106460604 106461221 + Celsr3 protein_coding retained_intron MGP_BALBcJ_T0094699.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106461230 106461916 + Celsr3 protein_coding retained_intron MGP_BALBcJ_T0094700.1 MGP_BALBcJ_G0035287.1 mouse_genomes_project 9 106461248 106466762 + MGP_BALBcJ_P0094700 Celsr3 protein_coding protein_coding MGP_BALBcJ_T0005405.1 MGP_BALBcJ_G0004580.1 mouse_genomes_project 9 31802697 31812762 - Kirrel3os antisense antisense MGP_BALBcJ_T0092271.1 MGP_BALBcJ_G0034758.1 mouse_genomes_project 9 47743586 47768993 - MGP_BALBcJ_P0092271 Dlat protein_coding protein_coding MGP_BALBcJ_T0092272.1 MGP_BALBcJ_G0034758.1 mouse_genomes_project 9 47745481 47753370 - Dlat protein_coding retained_intron MGP_BALBcJ_T0092273.1 MGP_BALBcJ_G0034758.1 mouse_genomes_project 9 47746409 47755403 - Dlat protein_coding processed_transcript MGP_BALBcJ_T0092274.1 MGP_BALBcJ_G0034758.1 mouse_genomes_project 9 47748867 47753071 - Dlat protein_coding retained_intron MGP_BALBcJ_T0092275.1 MGP_BALBcJ_G0034758.1 mouse_genomes_project 9 47749184 47756849 - Dlat protein_coding processed_transcript MGP_BALBcJ_T0092276.1 MGP_BALBcJ_G0034758.1 mouse_genomes_project 9 47753041 47759116 - Dlat protein_coding retained_intron MGP_BALBcJ_T0100215.1 MGP_BALBcJ_G0038251.1 mouse_genomes_project 9 89279032 89279137 + Gm26101 snRNA snRNA MGP_BALBcJ_T0092290.1 MGP_BALBcJ_G0034760.1 mouse_genomes_project 9 47851667 47858527 - MGP_BALBcJ_P0092290 2310030G06Rik protein_coding protein_coding MGP_BALBcJ_T0016122.1 MGP_BALBcJ_G0014219.1 mouse_genomes_project 9 105937709 105938073 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092948.1 MGP_BALBcJ_G0034951.1 mouse_genomes_project 9 63995303 64052032 + MGP_BALBcJ_P0092948 Car12 protein_coding protein_coding MGP_BALBcJ_T0092949.1 MGP_BALBcJ_G0034951.1 mouse_genomes_project 9 63995344 64039656 + Car12 protein_coding retained_intron MGP_BALBcJ_T0092950.1 MGP_BALBcJ_G0034951.1 mouse_genomes_project 9 63995345 64033106 + Car12 protein_coding retained_intron MGP_BALBcJ_T0092951.1 MGP_BALBcJ_G0034951.1 mouse_genomes_project 9 63995347 64052029 + MGP_BALBcJ_P0092951 Car12 protein_coding protein_coding MGP_BALBcJ_T0092952.1 MGP_BALBcJ_G0034951.1 mouse_genomes_project 9 64032937 64049504 + MGP_BALBcJ_P0092952 Car12 protein_coding protein_coding MGP_BALBcJ_T0091795.1 MGP_BALBcJ_G0034544.1 mouse_genomes_project 9 34669719 34706877 + MGP_BALBcJ_P0091795 protein_coding protein_coding MGP_BALBcJ_T0093083.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68957058 69107915 - MGP_BALBcJ_P0093083 Cgnl1 protein_coding protein_coding MGP_BALBcJ_T0093084.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68957058 69107915 - MGP_BALBcJ_P0093084 Cgnl1 protein_coding protein_coding MGP_BALBcJ_T0093085.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68959407 68962420 - Cgnl1 protein_coding retained_intron MGP_BALBcJ_T0093086.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68959759 69107873 - MGP_BALBcJ_P0093086 Cgnl1 protein_coding protein_coding MGP_BALBcJ_T0093087.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68959808 69107969 - MGP_BALBcJ_P0093087 Cgnl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0093088.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68961646 68962641 - Cgnl1 protein_coding retained_intron MGP_BALBcJ_T0093089.1 MGP_BALBcJ_G0034984.1 mouse_genomes_project 9 68963914 68979660 - Cgnl1 protein_coding processed_transcript MGP_BALBcJ_T0101466.1 MGP_BALBcJ_G0039502.1 mouse_genomes_project 9 43637546 43637676 + Gm22659 snoRNA snoRNA MGP_BALBcJ_T0092802.1 MGP_BALBcJ_G0034910.1 mouse_genomes_project 9 61419812 61423200 + MGP_BALBcJ_P0092802 Snapc5 protein_coding protein_coding MGP_BALBcJ_T0091848.1 MGP_BALBcJ_G0034590.1 mouse_genomes_project 9 35863250 35864177 + MGP_BALBcJ_P0091848 protein_coding protein_coding MGP_BALBcJ_T0091232.1 MGP_BALBcJ_G0034332.1 mouse_genomes_project 9 11731495 11791837 - MGP_BALBcJ_P0091232 Hephl1 protein_coding protein_coding MGP_BALBcJ_T0093351.1 MGP_BALBcJ_G0035043.1 mouse_genomes_project 9 77013467 77134181 - MGP_BALBcJ_P0093351 Col12a1 protein_coding protein_coding MGP_BALBcJ_T0093352.1 MGP_BALBcJ_G0035043.1 mouse_genomes_project 9 77013467 77027479 - MGP_BALBcJ_P0093352 Col12a1 protein_coding protein_coding MGP_BALBcJ_T0093353.1 MGP_BALBcJ_G0035043.1 mouse_genomes_project 9 77016232 77134383 - MGP_BALBcJ_P0093353 Col12a1 protein_coding protein_coding MGP_BALBcJ_T0093354.1 MGP_BALBcJ_G0035043.1 mouse_genomes_project 9 77107794 77134383 - Col12a1 protein_coding retained_intron MGP_BALBcJ_T0093355.1 MGP_BALBcJ_G0035043.1 mouse_genomes_project 9 77128206 77134494 - Col12a1 protein_coding retained_intron MGP_BALBcJ_T0093356.1 MGP_BALBcJ_G0035043.1 mouse_genomes_project 9 77130578 77134157 - Col12a1 protein_coding retained_intron MGP_BALBcJ_T0091506.1 MGP_BALBcJ_G0034456.1 mouse_genomes_project 9 19243809 19264299 - MGP_BALBcJ_P0091506 Rp9 protein_coding protein_coding MGP_BALBcJ_T0018547.1 MGP_BALBcJ_G0015699.1 mouse_genomes_project 9 106441943 106443104 - Gm35025 processed_transcript lincRNA MGP_BALBcJ_T0018548.1 MGP_BALBcJ_G0015699.1 mouse_genomes_project 9 106442075 106442825 - Gm35025 processed_transcript lincRNA MGP_BALBcJ_T0018549.1 MGP_BALBcJ_G0015699.1 mouse_genomes_project 9 106442172 106442867 - Gm35025 processed_transcript TEC MGP_BALBcJ_T0016084.1 MGP_BALBcJ_G0014181.1 mouse_genomes_project 9 90071567 90072033 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101458.1 MGP_BALBcJ_G0039494.1 mouse_genomes_project 9 35428530 35428654 + Gm23271 snoRNA snoRNA MGP_BALBcJ_T0092360.1 MGP_BALBcJ_G0034782.1 mouse_genomes_project 9 50503955 50521784 + MGP_BALBcJ_P0092360 Kdelc2 protein_coding protein_coding MGP_BALBcJ_T0100223.1 MGP_BALBcJ_G0038259.1 mouse_genomes_project 9 104672662 104672769 + Gm22454 snRNA snRNA MGP_BALBcJ_T0094793.1 MGP_BALBcJ_G0035306.1 mouse_genomes_project 9 106857621 107425301 - protein_coding retained_intron MGP_BALBcJ_T0094794.1 MGP_BALBcJ_G0035306.1 mouse_genomes_project 9 106859127 107425293 - MGP_BALBcJ_P0094794 protein_coding protein_coding MGP_BALBcJ_T0011060.1 MGP_BALBcJ_G0009185.1 mouse_genomes_project 9 68150375 68150457 - Gm25149 miRNA miRNA MGP_BALBcJ_T0092615.1 MGP_BALBcJ_G0034863.1 mouse_genomes_project 9 55549321 55561239 - MGP_BALBcJ_P0092615 Tbc1d21 protein_coding protein_coding MGP_BALBcJ_T0002425.1 MGP_BALBcJ_G0002334.1 mouse_genomes_project 9 98626352 98627954 + TEC TEC MGP_BALBcJ_T0091960.1 MGP_BALBcJ_G0034653.1 mouse_genomes_project 9 40122727 40209497 - MGP_BALBcJ_P0091960 Pou2f3 protein_coding protein_coding MGP_BALBcJ_T0091961.1 MGP_BALBcJ_G0034653.1 mouse_genomes_project 9 40123327 40205012 - MGP_BALBcJ_P0091961 Pou2f3 protein_coding protein_coding MGP_BALBcJ_T0011716.1 MGP_BALBcJ_G0009841.1 mouse_genomes_project 9 39513641 39513700 - Gm24420 misc_RNA misc_RNA MGP_BALBcJ_T0101452.1 MGP_BALBcJ_G0039488.1 mouse_genomes_project 9 21798252 21798386 + Gm23893 snoRNA snoRNA MGP_BALBcJ_T0094776.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106669301 106695362 + MGP_BALBcJ_P0094776 Plxnb1 protein_coding protein_coding MGP_BALBcJ_T0094777.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106669864 106674412 + MGP_BALBcJ_P0094777 Plxnb1 protein_coding protein_coding MGP_BALBcJ_T0094778.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106670622 106674412 + MGP_BALBcJ_P0094778 Plxnb1 protein_coding protein_coding MGP_BALBcJ_T0094779.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106679270 106684323 + MGP_BALBcJ_P0094779 Plxnb1 protein_coding protein_coding MGP_BALBcJ_T0094780.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106679819 106681126 + Plxnb1 protein_coding retained_intron MGP_BALBcJ_T0094781.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106680281 106681250 + Plxnb1 protein_coding retained_intron MGP_BALBcJ_T0094782.1 MGP_BALBcJ_G0035300.1 mouse_genomes_project 9 106681112 106684352 + Plxnb1 protein_coding retained_intron MGP_BALBcJ_T0093741.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94294640 94361335 - MGP_BALBcJ_P0093741 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093742.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94294648 94361351 - MGP_BALBcJ_P0093742 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093743.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94294648 94361396 - MGP_BALBcJ_P0093743 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093744.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94294890 94361355 - MGP_BALBcJ_P0093744 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093745.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94296720 94361350 - MGP_BALBcJ_P0093745 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093746.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94296891 94334921 - MGP_BALBcJ_P0093746 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093747.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94310952 94326939 - Pxylp1 protein_coding processed_transcript MGP_BALBcJ_T0093748.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94311062 94364591 - MGP_BALBcJ_P0093748 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093749.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94311751 94361342 - Pxylp1 protein_coding retained_intron MGP_BALBcJ_T0093750.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94311868 94334998 - MGP_BALBcJ_P0093750 Pxylp1 protein_coding protein_coding MGP_BALBcJ_T0093751.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94328484 94335000 - Pxylp1 protein_coding processed_transcript MGP_BALBcJ_T0093752.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94332820 94364012 - Pxylp1 protein_coding processed_transcript MGP_BALBcJ_T0093753.1 MGP_BALBcJ_G0035121.1 mouse_genomes_project 9 94359552 94361355 - Pxylp1 protein_coding retained_intron MGP_BALBcJ_T0093795.1 MGP_BALBcJ_G0035138.1 mouse_genomes_project 9 96496852 96526038 - MGP_BALBcJ_P0093795 Gm1123 protein_coding protein_coding MGP_BALBcJ_T0002391.1 MGP_BALBcJ_G0002301.1 mouse_genomes_project 9 83967685 83967799 - TEC TEC MGP_BALBcJ_T0002392.1 MGP_BALBcJ_G0002301.1 mouse_genomes_project 9 83967685 83968157 - TEC TEC MGP_BALBcJ_T0018500.1 MGP_BALBcJ_G0015680.1 mouse_genomes_project 9 61320174 61327034 + Scarletltr processed_transcript processed_transcript MGP_BALBcJ_T0093831.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97133323 97141622 + MGP_BALBcJ_P0093831 Dzip1l protein_coding protein_coding MGP_BALBcJ_T0093832.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97133369 97177197 + MGP_BALBcJ_P0093832 Dzip1l protein_coding protein_coding MGP_BALBcJ_T0093833.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97133405 97177197 + MGP_BALBcJ_P0093833 Dzip1l protein_coding protein_coding MGP_BALBcJ_T0093834.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97133670 97177197 + MGP_BALBcJ_P0093834 Dzip1l protein_coding protein_coding MGP_BALBcJ_T0093835.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97138686 97177104 + MGP_BALBcJ_P0093835 Dzip1l protein_coding protein_coding MGP_BALBcJ_T0093836.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97151725 97158582 + Dzip1l protein_coding processed_transcript MGP_BALBcJ_T0093837.1 MGP_BALBcJ_G0035147.1 mouse_genomes_project 9 97157861 97161331 + Dzip1l protein_coding retained_intron MGP_BALBcJ_T0015994.1 MGP_BALBcJ_G0014091.1 mouse_genomes_project 9 19276223 19276736 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0016113.1 MGP_BALBcJ_G0014210.1 mouse_genomes_project 9 100958227 100958604 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092487.1 MGP_BALBcJ_G0034824.1 mouse_genomes_project 9 53750633 53820433 - MGP_BALBcJ_P0092487 Lingo1 protein_coding protein_coding MGP_BALBcJ_T0092488.1 MGP_BALBcJ_G0034824.1 mouse_genomes_project 9 53751246 53767787 - MGP_BALBcJ_P0092488 Lingo1 protein_coding protein_coding MGP_BALBcJ_T0092489.1 MGP_BALBcJ_G0034824.1 mouse_genomes_project 9 53751263 53779711 - MGP_BALBcJ_P0092489 Lingo1 protein_coding protein_coding MGP_BALBcJ_T0092703.1 MGP_BALBcJ_G0034886.1 mouse_genomes_project 9 58019967 58037393 - MGP_BALBcJ_P0092703 Gm9869 protein_coding protein_coding MGP_BALBcJ_T0094174.1 MGP_BALBcJ_G0035209.1 mouse_genomes_project 9 104076023 104078305 + MGP_BALBcJ_P0094174 Iqcf1 protein_coding protein_coding MGP_BALBcJ_T0094175.1 MGP_BALBcJ_G0035209.1 mouse_genomes_project 9 104076048 104078310 + MGP_BALBcJ_P0094175 Iqcf1 protein_coding protein_coding MGP_BALBcJ_T0016009.1 MGP_BALBcJ_G0014106.1 mouse_genomes_project 9 38644496 38645464 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0094820.1 MGP_BALBcJ_G0035314.1 mouse_genomes_project 9 107633684 107637005 - MGP_BALBcJ_P0094820 Camp protein_coding protein_coding MGP_BALBcJ_T0092467.1 MGP_BALBcJ_G0034817.1 mouse_genomes_project 9 52670448 53042818 - MGP_BALBcJ_P0092467 Scaper protein_coding protein_coding MGP_BALBcJ_T0092468.1 MGP_BALBcJ_G0034817.1 mouse_genomes_project 9 52877504 53061584 - MGP_BALBcJ_P0092468 Scaper protein_coding unknown_likely_coding MGP_BALBcJ_T0091849.1 MGP_BALBcJ_G0034591.1 mouse_genomes_project 9 35913778 35914560 + MGP_BALBcJ_P0091849 Olfr933 protein_coding protein_coding MGP_BALBcJ_T0095151.1 MGP_BALBcJ_G0035382.1 mouse_genomes_project 9 116576077 116652430 + MGP_BALBcJ_P0095151 Golga4 protein_coding protein_coding MGP_BALBcJ_T0009273.1 MGP_BALBcJ_G0007450.1 mouse_genomes_project 9 88764939 88768539 + Gm28652 lincRNA lincRNA MGP_BALBcJ_T0100195.1 MGP_BALBcJ_G0038231.1 mouse_genomes_project 9 63637891 63637993 - Gm23428 snRNA snRNA MGP_BALBcJ_T0002344.1 MGP_BALBcJ_G0002254.1 mouse_genomes_project 9 29373972 29376611 - TEC TEC MGP_BALBcJ_T0101489.1 MGP_BALBcJ_G0039525.1 mouse_genomes_project 9 85266431 85266563 - Gm25528 snoRNA snoRNA MGP_BALBcJ_T0091875.1 MGP_BALBcJ_G0034611.1 mouse_genomes_project 9 36592192 36593259 + MGP_BALBcJ_P0091875 Olfr960 protein_coding protein_coding MGP_BALBcJ_T0095385.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121836936 121861779 - Lztfl1 protein_coding processed_transcript MGP_BALBcJ_T0095386.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121839532 121861682 - MGP_BALBcJ_P0095386 Lztfl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0095387.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121839532 121856778 - MGP_BALBcJ_P0095387 Lztfl1 protein_coding protein_coding MGP_BALBcJ_T0095388.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121841559 121861779 - MGP_BALBcJ_P0095388 Lztfl1 protein_coding protein_coding MGP_BALBcJ_T0095389.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121850045 121852054 - Lztfl1 protein_coding retained_intron MGP_BALBcJ_T0095390.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121851793 121861707 - Lztfl1 protein_coding processed_transcript MGP_BALBcJ_T0095391.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121856632 121861701 - Lztfl1 protein_coding processed_transcript MGP_BALBcJ_T0095392.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121856636 121861703 - Lztfl1 protein_coding processed_transcript MGP_BALBcJ_T0095393.1 MGP_BALBcJ_G0035459.1 mouse_genomes_project 9 121859039 121861736 - Lztfl1 protein_coding retained_intron MGP_BALBcJ_T0009222.1 MGP_BALBcJ_G0007409.1 mouse_genomes_project 9 53738553 53746630 + Gm26868 lincRNA lincRNA MGP_BALBcJ_T0101512.1 MGP_BALBcJ_G0039548.1 mouse_genomes_project 9 121286428 121286561 + Gm23323 snoRNA snoRNA MGP_BALBcJ_T0002415.1 MGP_BALBcJ_G0002324.1 mouse_genomes_project 9 95414299 95415849 - TEC TEC MGP_BALBcJ_T0094514.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105808065 105867345 - MGP_BALBcJ_P0094514 Dag1 protein_coding protein_coding MGP_BALBcJ_T0094515.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105809375 105867202 - MGP_BALBcJ_P0094515 Dag1 protein_coding protein_coding MGP_BALBcJ_T0094516.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105809386 105867305 - MGP_BALBcJ_P0094516 Dag1 protein_coding protein_coding MGP_BALBcJ_T0094517.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105809389 105867123 - MGP_BALBcJ_P0094517 Dag1 protein_coding protein_coding MGP_BALBcJ_T0094518.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105821608 105867138 - MGP_BALBcJ_P0094518 Dag1 protein_coding protein_coding MGP_BALBcJ_T0094519.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105821646 105867096 - MGP_BALBcJ_P0094519 Dag1 protein_coding protein_coding MGP_BALBcJ_T0094520.1 MGP_BALBcJ_G0035261.1 mouse_genomes_project 9 105855205 105867138 - Dag1 protein_coding retained_intron MGP_BALBcJ_T0009202.1 MGP_BALBcJ_G0007394.1 mouse_genomes_project 9 32383334 32385288 - lincRNA lincRNA MGP_BALBcJ_T0098672.1 MGP_BALBcJ_G0036726.1 mouse_genomes_project 9 59732128 59732237 + n-R5s84 rRNA rRNA MGP_BALBcJ_T0009196.1 MGP_BALBcJ_G0007388.1 mouse_genomes_project 9 29714216 29715107 + lincRNA lincRNA MGP_BALBcJ_T0098669.1 MGP_BALBcJ_G0036723.1 mouse_genomes_project 9 32370609 32370717 - Gm24188 rRNA rRNA MGP_BALBcJ_T0100197.1 MGP_BALBcJ_G0038233.1 mouse_genomes_project 9 64409124 64409272 + Gm22145 snRNA snRNA MGP_BALBcJ_T0100202.1 MGP_BALBcJ_G0038238.1 mouse_genomes_project 9 69450260 69450359 - Gm25045 snRNA snRNA MGP_BALBcJ_T0092788.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61377691 61413498 - MGP_BALBcJ_P0092788 Zwilch protein_coding protein_coding MGP_BALBcJ_T0092789.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61378216 61413252 - MGP_BALBcJ_P0092789 Zwilch protein_coding protein_coding MGP_BALBcJ_T0092790.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61378259 61384716 - Zwilch protein_coding retained_intron MGP_BALBcJ_T0092791.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61380451 61413288 - MGP_BALBcJ_P0092791 Zwilch protein_coding protein_coding MGP_BALBcJ_T0092792.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61380528 61390585 - MGP_BALBcJ_P0092792 Zwilch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092793.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61380530 61387866 - MGP_BALBcJ_P0092793 Zwilch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092794.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61384688 61395815 - Zwilch protein_coding retained_intron MGP_BALBcJ_T0092795.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61387882 61396063 - Zwilch protein_coding retained_intron MGP_BALBcJ_T0092796.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61395500 61413307 - MGP_BALBcJ_P0092796 Zwilch protein_coding protein_coding MGP_BALBcJ_T0092797.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61401626 61413300 - MGP_BALBcJ_P0092797 Zwilch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092798.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61402045 61413282 - MGP_BALBcJ_P0092798 Zwilch protein_coding protein_coding MGP_BALBcJ_T0092799.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61403333 61413284 - MGP_BALBcJ_P0092799 Zwilch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092800.1 MGP_BALBcJ_G0034908.1 mouse_genomes_project 9 61408764 61413297 - Zwilch protein_coding retained_intron MGP_BALBcJ_T0093796.1 MGP_BALBcJ_G0035139.1 mouse_genomes_project 9 96526976 96631501 - MGP_BALBcJ_P0093796 Pik3cb protein_coding protein_coding MGP_BALBcJ_T0093797.1 MGP_BALBcJ_G0035139.1 mouse_genomes_project 9 96528723 96631339 - MGP_BALBcJ_P0093797 Pik3cb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0093798.1 MGP_BALBcJ_G0035139.1 mouse_genomes_project 9 96592396 96632035 - MGP_BALBcJ_P0093798 Pik3cb protein_coding protein_coding MGP_BALBcJ_T0016004.1 MGP_BALBcJ_G0014101.1 mouse_genomes_project 9 32453399 32453669 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009211.1 MGP_BALBcJ_G0007401.1 mouse_genomes_project 9 41138787 41147542 + Gm26737 lincRNA lincRNA MGP_BALBcJ_T0016021.1 MGP_BALBcJ_G0014118.1 mouse_genomes_project 9 57046313 57046590 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092957.1 MGP_BALBcJ_G0034954.1 mouse_genomes_project 9 64108193 64131694 - MGP_BALBcJ_P0092957 Aph1c protein_coding protein_coding MGP_BALBcJ_T0091263.1 MGP_BALBcJ_G0034342.1 mouse_genomes_project 9 12618549 13085893 - MGP_BALBcJ_P0091263 Fat3 protein_coding protein_coding MGP_BALBcJ_T0016118.1 MGP_BALBcJ_G0014215.1 mouse_genomes_project 9 103697370 103697968 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0092619.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55773822 55844753 + MGP_BALBcJ_P0092619 Nptn protein_coding protein_coding MGP_BALBcJ_T0092620.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55773874 55846313 + MGP_BALBcJ_P0092620 Nptn protein_coding protein_coding MGP_BALBcJ_T0092621.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55773956 55834115 + MGP_BALBcJ_P0092621 Nptn protein_coding non_stop_decay MGP_BALBcJ_T0092622.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55773988 55846313 + MGP_BALBcJ_P0092622 Nptn protein_coding protein_coding MGP_BALBcJ_T0092623.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55773989 55844753 + MGP_BALBcJ_P0092623 Nptn protein_coding protein_coding MGP_BALBcJ_T0092624.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55773989 55837241 + MGP_BALBcJ_P0092624 Nptn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092625.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55774018 55844753 + MGP_BALBcJ_P0092625 Nptn protein_coding protein_coding MGP_BALBcJ_T0092626.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55774023 55845397 + MGP_BALBcJ_P0092626 Nptn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092627.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55774026 55837103 + Nptn protein_coding processed_transcript MGP_BALBcJ_T0092628.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55822539 55851390 + MGP_BALBcJ_P0092628 Nptn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0092629.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55822540 55848643 + MGP_BALBcJ_P0092629 Nptn protein_coding protein_coding MGP_BALBcJ_T0092630.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55843633 55845492 + Nptn protein_coding retained_intron MGP_BALBcJ_T0092631.1 MGP_BALBcJ_G0034866.1 mouse_genomes_project 9 55845410 55846253 + Nptn protein_coding processed_transcript MGP_BALBcJ_T0003352.1 MGP_BALBcJ_G0003088.1 mouse_genomes_project 11 121116188 121116846 - Gm15643 antisense antisense MGP_BALBcJ_T0012667.1 MGP_BALBcJ_G0010764.1 mouse_genomes_project 11 78311080 78311227 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031458.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86244562 86316344 + Rnf43 protein_coding retained_intron MGP_BALBcJ_T0031459.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86244927 86304878 + Rnf43 protein_coding processed_transcript MGP_BALBcJ_T0031460.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86246389 86320950 + MGP_BALBcJ_P0031460 Rnf43 protein_coding protein_coding MGP_BALBcJ_T0031461.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86246456 86321966 + MGP_BALBcJ_P0031461 Rnf43 protein_coding protein_coding MGP_BALBcJ_T0031462.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86313840 86316936 + Rnf43 protein_coding retained_intron MGP_BALBcJ_T0031463.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86315783 86317523 + Rnf43 protein_coding retained_intron MGP_BALBcJ_T0031464.1 MGP_BALBcJ_G0018849.1 mouse_genomes_project 11 86320329 86320878 + Rnf43 protein_coding processed_transcript MGP_BALBcJ_T0027841.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2044216 2069506 - MGP_BALBcJ_P0027841 Emid1 protein_coding protein_coding MGP_BALBcJ_T0027842.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2044216 2091830 - MGP_BALBcJ_P0027842 Emid1 protein_coding protein_coding MGP_BALBcJ_T0027843.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2044217 2091813 - MGP_BALBcJ_P0027843 Emid1 protein_coding protein_coding MGP_BALBcJ_T0027844.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2044222 2068377 - MGP_BALBcJ_P0027844 Emid1 protein_coding protein_coding MGP_BALBcJ_T0027845.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2044596 2067970 - Emid1 protein_coding retained_intron MGP_BALBcJ_T0027846.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2044858 2067791 - MGP_BALBcJ_P0027846 Emid1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027847.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2070702 2091810 - MGP_BALBcJ_P0027847 Emid1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027848.1 MGP_BALBcJ_G0017939.1 mouse_genomes_project 11 2074131 2089857 - Emid1 protein_coding processed_transcript MGP_BALBcJ_T0032972.1 MGP_BALBcJ_G0019238.1 mouse_genomes_project 11 105190203 105229216 - Strada protein_coding processed_transcript MGP_BALBcJ_T0032973.1 MGP_BALBcJ_G0019238.1 mouse_genomes_project 11 105190224 105220592 - MGP_BALBcJ_P0032973 Strada protein_coding protein_coding MGP_BALBcJ_T0032974.1 MGP_BALBcJ_G0019238.1 mouse_genomes_project 11 105190721 105220618 - MGP_BALBcJ_P0032974 Strada protein_coding protein_coding MGP_BALBcJ_T0032975.1 MGP_BALBcJ_G0019238.1 mouse_genomes_project 11 105195348 105220595 - MGP_BALBcJ_P0032975 Strada protein_coding protein_coding MGP_BALBcJ_T0032976.1 MGP_BALBcJ_G0019238.1 mouse_genomes_project 11 105210767 105220628 - MGP_BALBcJ_P0032976 Strada protein_coding protein_coding MGP_BALBcJ_T0030767.1 MGP_BALBcJ_G0018679.1 mouse_genomes_project 11 75103917 75166517 - MGP_BALBcJ_P0030767 Cpd protein_coding protein_coding MGP_BALBcJ_T0030768.1 MGP_BALBcJ_G0018679.1 mouse_genomes_project 11 75112061 75116939 - Cpd protein_coding retained_intron MGP_BALBcJ_T0030769.1 MGP_BALBcJ_G0018679.1 mouse_genomes_project 11 75131573 75134688 - Cpd protein_coding retained_intron MGP_BALBcJ_T0033199.1 MGP_BALBcJ_G0019286.1 mouse_genomes_project 11 109387358 109456942 - MGP_BALBcJ_P0033199 Abca5 protein_coding protein_coding MGP_BALBcJ_T0033200.1 MGP_BALBcJ_G0019286.1 mouse_genomes_project 11 109405224 109456886 - MGP_BALBcJ_P0033200 Abca5 protein_coding protein_coding MGP_BALBcJ_T0033201.1 MGP_BALBcJ_G0019286.1 mouse_genomes_project 11 109427526 109456909 - Abca5 protein_coding retained_intron MGP_BALBcJ_T0033202.1 MGP_BALBcJ_G0019286.1 mouse_genomes_project 11 109438690 109456904 - MGP_BALBcJ_P0033202 Abca5 protein_coding protein_coding MGP_BALBcJ_T0033203.1 MGP_BALBcJ_G0019286.1 mouse_genomes_project 11 109444781 109456980 - Abca5 protein_coding processed_transcript MGP_BALBcJ_T0006167.1 MGP_BALBcJ_G0005154.1 mouse_genomes_project 11 21509964 21810383 + lincRNA lincRNA MGP_BALBcJ_T0031036.1 MGP_BALBcJ_G0018738.1 mouse_genomes_project 11 77927255 77944586 - MGP_BALBcJ_P0031036 Gm21975 protein_coding protein_coding MGP_BALBcJ_T0031037.1 MGP_BALBcJ_G0018738.1 mouse_genomes_project 11 77927255 77944556 - MGP_BALBcJ_P0031037 Gm21975 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009684.1 MGP_BALBcJ_G0007809.1 mouse_genomes_project 11 70847380 70847453 + Gm25678 miRNA miRNA MGP_BALBcJ_T0032329.1 MGP_BALBcJ_G0019105.1 mouse_genomes_project 11 99563250 99586760 - MGP_BALBcJ_P0032329 Zfp385c protein_coding protein_coding MGP_BALBcJ_T0032330.1 MGP_BALBcJ_G0019105.1 mouse_genomes_project 11 99565668 99587751 - Zfp385c protein_coding processed_transcript MGP_BALBcJ_T0032331.1 MGP_BALBcJ_G0019105.1 mouse_genomes_project 11 99566431 99593696 - MGP_BALBcJ_P0032331 Zfp385c protein_coding protein_coding MGP_BALBcJ_T0032332.1 MGP_BALBcJ_G0019105.1 mouse_genomes_project 11 99574266 99630506 - MGP_BALBcJ_P0032332 Zfp385c protein_coding protein_coding MGP_BALBcJ_T0030397.1 MGP_BALBcJ_G0018572.1 mouse_genomes_project 11 70394772 70397241 + MGP_BALBcJ_P0030397 Txndc17 protein_coding protein_coding MGP_BALBcJ_T0030398.1 MGP_BALBcJ_G0018572.1 mouse_genomes_project 11 70394840 70395903 + Txndc17 protein_coding retained_intron MGP_BALBcJ_T0032345.1 MGP_BALBcJ_G0019109.1 mouse_genomes_project 11 99652890 99676535 - MGP_BALBcJ_P0032345 Rab5c protein_coding protein_coding MGP_BALBcJ_T0032346.1 MGP_BALBcJ_G0019109.1 mouse_genomes_project 11 99652892 99676535 - MGP_BALBcJ_P0032346 Rab5c protein_coding protein_coding MGP_BALBcJ_T0032347.1 MGP_BALBcJ_G0019109.1 mouse_genomes_project 11 99656381 99668470 - MGP_BALBcJ_P0032347 Rab5c protein_coding protein_coding MGP_BALBcJ_T0032348.1 MGP_BALBcJ_G0019109.1 mouse_genomes_project 11 99658202 99676496 - MGP_BALBcJ_P0032348 Rab5c protein_coding protein_coding MGP_BALBcJ_T0029101.1 MGP_BALBcJ_G0018261.1 mouse_genomes_project 11 52711531 52718655 + MGP_BALBcJ_P0029101 Gpx3 protein_coding protein_coding MGP_BALBcJ_T0029102.1 MGP_BALBcJ_G0018261.1 mouse_genomes_project 11 52711850 52719456 + MGP_BALBcJ_P0029102 Gpx3 protein_coding protein_coding MGP_BALBcJ_T0029103.1 MGP_BALBcJ_G0018261.1 mouse_genomes_project 11 52712004 52718613 + MGP_BALBcJ_P0029103 Gpx3 protein_coding protein_coding MGP_BALBcJ_T0029234.1 MGP_BALBcJ_G0018313.1 mouse_genomes_project 11 56638425 56643583 + MGP_BALBcJ_P0029234 Olfr315 protein_coding protein_coding MGP_BALBcJ_T0029235.1 MGP_BALBcJ_G0018313.1 mouse_genomes_project 11 56643163 56644161 + MGP_BALBcJ_P0029235 Olfr315 protein_coding protein_coding MGP_BALBcJ_T0012566.1 MGP_BALBcJ_G0010663.1 mouse_genomes_project 11 47245556 47246043 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009727.1 MGP_BALBcJ_G0007852.1 mouse_genomes_project 11 101232289 101232400 - Mir8101 miRNA miRNA MGP_BALBcJ_T0017252.1 MGP_BALBcJ_G0015162.1 mouse_genomes_project 11 119491721 119493505 - 2900052L18Rik processed_transcript processed_transcript MGP_BALBcJ_T0027986.1 MGP_BALBcJ_G0017975.1 mouse_genomes_project 11 4185333 4193145 - MGP_BALBcJ_P0027986 Igfbp3 protein_coding protein_coding MGP_BALBcJ_T0027987.1 MGP_BALBcJ_G0017975.1 mouse_genomes_project 11 4186933 4193171 - MGP_BALBcJ_P0027987 Igfbp3 protein_coding protein_coding MGP_BALBcJ_T0029464.1 MGP_BALBcJ_G0018374.1 mouse_genomes_project 11 59202268 59207065 + MGP_BALBcJ_P0029464 Aldh3a1 protein_coding protein_coding MGP_BALBcJ_T0029465.1 MGP_BALBcJ_G0018374.1 mouse_genomes_project 11 59203352 59213153 + MGP_BALBcJ_P0029465 Aldh3a1 protein_coding protein_coding MGP_BALBcJ_T0029466.1 MGP_BALBcJ_G0018374.1 mouse_genomes_project 11 59203476 59213153 + MGP_BALBcJ_P0029466 Aldh3a1 protein_coding protein_coding MGP_BALBcJ_T0012645.1 MGP_BALBcJ_G0010742.1 mouse_genomes_project 11 72051779 72053599 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028951.1 MGP_BALBcJ_G0018223.1 mouse_genomes_project 11 49955890 49987027 - MGP_BALBcJ_P0028951 Tcf7 protein_coding protein_coding MGP_BALBcJ_T0006299.1 MGP_BALBcJ_G0005257.1 mouse_genomes_project 11 95027526 95044687 + Gm53 lincRNA lincRNA MGP_BALBcJ_T0006300.1 MGP_BALBcJ_G0005257.1 mouse_genomes_project 11 95028053 95044901 + Gm53 lincRNA lincRNA MGP_BALBcJ_T0006301.1 MGP_BALBcJ_G0005257.1 mouse_genomes_project 11 95028941 95041888 + Gm53 lincRNA lincRNA MGP_BALBcJ_T0006302.1 MGP_BALBcJ_G0005257.1 mouse_genomes_project 11 95041804 95045071 + Gm53 lincRNA lincRNA MGP_BALBcJ_T0028552.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759857 40766015 - MGP_BALBcJ_P0028552 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028553.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759871 40765738 - MGP_BALBcJ_P0028553 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028554.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759872 40762735 - MGP_BALBcJ_P0028554 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028555.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759876 40765959 - MGP_BALBcJ_P0028555 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028556.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759880 40765974 - MGP_BALBcJ_P0028556 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028557.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759881 40765720 - MGP_BALBcJ_P0028557 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028558.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40759885 40765738 - MGP_BALBcJ_P0028558 Pttg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028559.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40760638 40765984 - MGP_BALBcJ_P0028559 Pttg1 protein_coding protein_coding MGP_BALBcJ_T0028560.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40762663 40765875 - Pttg1 protein_coding processed_transcript MGP_BALBcJ_T0028561.1 MGP_BALBcJ_G0018112.1 mouse_genomes_project 11 40764378 40765970 - Pttg1 protein_coding retained_intron MGP_BALBcJ_T0028320.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26886738 26941275 + MGP_BALBcJ_P0028320 Rtn4 protein_coding protein_coding MGP_BALBcJ_T0028321.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26886738 26942690 + MGP_BALBcJ_P0028321 Rtn4 protein_coding protein_coding MGP_BALBcJ_T0028322.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26886738 26941275 + MGP_BALBcJ_P0028322 Rtn4 protein_coding protein_coding MGP_BALBcJ_T0028323.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26886739 26940470 + MGP_BALBcJ_P0028323 Rtn4 protein_coding protein_coding MGP_BALBcJ_T0028324.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26887565 26941275 + MGP_BALBcJ_P0028324 Rtn4 protein_coding protein_coding MGP_BALBcJ_T0028325.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26912543 26941275 + MGP_BALBcJ_P0028325 Rtn4 protein_coding protein_coding MGP_BALBcJ_T0028326.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26927670 26940794 + Rtn4 protein_coding processed_transcript MGP_BALBcJ_T0028327.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26927745 26940706 + Rtn4 protein_coding processed_transcript MGP_BALBcJ_T0028328.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26930368 26940706 + Rtn4 protein_coding processed_transcript MGP_BALBcJ_T0028329.1 MGP_BALBcJ_G0018051.1 mouse_genomes_project 11 26939343 26940644 + Rtn4 protein_coding processed_transcript MGP_BALBcJ_T0006161.1 MGP_BALBcJ_G0005148.1 mouse_genomes_project 11 19786768 19789954 - Gm12055 lincRNA lincRNA MGP_BALBcJ_T0033762.1 MGP_BALBcJ_G0019398.1 mouse_genomes_project 11 117069118 117083034 + MGP_BALBcJ_P0033762 Afmid protein_coding protein_coding MGP_BALBcJ_T0033763.1 MGP_BALBcJ_G0019398.1 mouse_genomes_project 11 117069168 117080360 + MGP_BALBcJ_P0033763 Afmid protein_coding protein_coding MGP_BALBcJ_T0033764.1 MGP_BALBcJ_G0019398.1 mouse_genomes_project 11 117069175 117075845 + Afmid protein_coding retained_intron MGP_BALBcJ_T0033765.1 MGP_BALBcJ_G0019398.1 mouse_genomes_project 11 117075298 117078543 + Afmid protein_coding retained_intron MGP_BALBcJ_T0033766.1 MGP_BALBcJ_G0019398.1 mouse_genomes_project 11 117075424 117080357 + Afmid protein_coding retained_intron MGP_BALBcJ_T0033767.1 MGP_BALBcJ_G0019398.1 mouse_genomes_project 11 117075467 117078650 + Afmid protein_coding retained_intron MGP_BALBcJ_T0006349.1 MGP_BALBcJ_G0005293.1 mouse_genomes_project 11 118361855 118367166 - Gm11754 lincRNA lincRNA MGP_BALBcJ_T0030765.1 MGP_BALBcJ_G0018678.1 mouse_genomes_project 11 75051560 75088543 - MGP_BALBcJ_P0030765 Gosr1 protein_coding protein_coding MGP_BALBcJ_T0030766.1 MGP_BALBcJ_G0018678.1 mouse_genomes_project 11 75073469 75088531 - Gosr1 protein_coding processed_transcript MGP_BALBcJ_T0030540.1 MGP_BALBcJ_G0018623.1 mouse_genomes_project 11 72271965 72272968 - MGP_BALBcJ_P0030540 Olfr399 protein_coding protein_coding MGP_BALBcJ_T0031609.1 MGP_BALBcJ_G0018887.1 mouse_genomes_project 11 92606689 92612986 - MGP_BALBcJ_P0031609 Nme2 protein_coding protein_coding MGP_BALBcJ_T0031610.1 MGP_BALBcJ_G0018887.1 mouse_genomes_project 11 92606692 92612510 - MGP_BALBcJ_P0031610 Nme2 protein_coding protein_coding MGP_BALBcJ_T0009635.1 MGP_BALBcJ_G0007760.1 mouse_genomes_project 11 23269067 23269176 + Mir6372 miRNA miRNA MGP_BALBcJ_T0028500.1 MGP_BALBcJ_G0018100.1 mouse_genomes_project 11 33128491 33273291 - MGP_BALBcJ_P0028500 Wwc1 protein_coding protein_coding MGP_BALBcJ_T0028501.1 MGP_BALBcJ_G0018100.1 mouse_genomes_project 11 33142861 33144225 - Wwc1 protein_coding processed_transcript MGP_BALBcJ_T0028502.1 MGP_BALBcJ_G0018100.1 mouse_genomes_project 11 33159385 33165828 - Wwc1 protein_coding processed_transcript MGP_BALBcJ_T0032425.1 MGP_BALBcJ_G0019127.1 mouse_genomes_project 11 100123567 100131466 + Cntnap1 protein_coding processed_transcript MGP_BALBcJ_T0032427.1 MGP_BALBcJ_G0019127.1 mouse_genomes_project 11 100129230 100143879 + MGP_BALBcJ_P0032427 Cntnap1 protein_coding protein_coding MGP_BALBcJ_T0031757.1 MGP_BALBcJ_G0018922.1 mouse_genomes_project 11 94070862 94116071 + MGP_BALBcJ_P0031757 Fam117a protein_coding protein_coding MGP_BALBcJ_T0031758.1 MGP_BALBcJ_G0018922.1 mouse_genomes_project 11 94070864 94109282 + Fam117a protein_coding processed_transcript MGP_BALBcJ_T0031759.1 MGP_BALBcJ_G0018922.1 mouse_genomes_project 11 94073820 94109831 + Fam117a protein_coding processed_transcript MGP_BALBcJ_T0031760.1 MGP_BALBcJ_G0018922.1 mouse_genomes_project 11 94073822 94097907 + Fam117a protein_coding processed_transcript MGP_BALBcJ_T0031761.1 MGP_BALBcJ_G0018922.1 mouse_genomes_project 11 94073851 94109286 + Fam117a protein_coding processed_transcript MGP_BALBcJ_T0031762.1 MGP_BALBcJ_G0018922.1 mouse_genomes_project 11 94109699 94111784 + Fam117a protein_coding processed_transcript MGP_BALBcJ_T0030307.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69010999 69109651 + MGP_BALBcJ_P0030307 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0030308.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011003 69107841 + Rabep1 protein_coding retained_intron MGP_BALBcJ_T0030309.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011013 69060806 + MGP_BALBcJ_P0030309 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0030310.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011020 69107836 + MGP_BALBcJ_P0030310 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0030311.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011146 69107478 + MGP_BALBcJ_P0030311 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0030312.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011163 69107184 + MGP_BALBcJ_P0030312 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0030313.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011196 69107022 + MGP_BALBcJ_P0030313 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0030314.1 MGP_BALBcJ_G0018557.1 mouse_genomes_project 11 69011196 69107022 + MGP_BALBcJ_P0030314 Rabep1 protein_coding protein_coding MGP_BALBcJ_T0012587.1 MGP_BALBcJ_G0010684.1 mouse_genomes_project 11 52937648 52937891 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009646.1 MGP_BALBcJ_G0007771.1 mouse_genomes_project 11 43432222 43432343 + Mir8100 miRNA miRNA MGP_BALBcJ_T0028967.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51106610 51180476 + MGP_BALBcJ_P0028967 Aff4 protein_coding protein_coding MGP_BALBcJ_T0028968.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51125428 51129679 + MGP_BALBcJ_P0028968 Aff4 protein_coding protein_coding MGP_BALBcJ_T0028969.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51125985 51133097 + Aff4 protein_coding retained_intron MGP_BALBcJ_T0028970.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51129738 51132869 + Aff4 protein_coding retained_intron MGP_BALBcJ_T0028971.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51130124 51155887 + MGP_BALBcJ_P0028971 Aff4 protein_coding protein_coding MGP_BALBcJ_T0028972.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51130132 51156878 + Aff4 protein_coding processed_transcript MGP_BALBcJ_T0028973.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51162893 51168176 + Aff4 protein_coding retained_intron MGP_BALBcJ_T0028974.1 MGP_BALBcJ_G0018229.1 mouse_genomes_project 11 51169339 51174479 + Aff4 protein_coding retained_intron MGP_BALBcJ_T0012466.1 MGP_BALBcJ_G0010563.1 mouse_genomes_project 11 12515293 12522167 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032245.1 MGP_BALBcJ_G0019083.1 mouse_genomes_project 11 99039428 99043677 - MGP_BALBcJ_P0032245 Krt13 protein_coding protein_coding MGP_BALBcJ_T0032246.1 MGP_BALBcJ_G0019083.1 mouse_genomes_project 11 99040001 99040945 - Krt13 protein_coding retained_intron MGP_BALBcJ_T0032247.1 MGP_BALBcJ_G0019083.1 mouse_genomes_project 11 99041255 99042688 - Krt13 protein_coding processed_transcript MGP_BALBcJ_T0029870.1 MGP_BALBcJ_G0018460.1 mouse_genomes_project 11 67233410 67237034 + MGP_BALBcJ_P0029870 Hes7 protein_coding protein_coding MGP_BALBcJ_T0029850.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183773 67185998 + MGP_BALBcJ_P0029850 Tmem107 protein_coding protein_coding MGP_BALBcJ_T0029851.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183778 67186261 + MGP_BALBcJ_P0029851 Tmem107 protein_coding protein_coding MGP_BALBcJ_T0029852.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183780 67185791 + Tmem107 protein_coding processed_transcript MGP_BALBcJ_T0029853.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183821 67184471 + Tmem107 protein_coding processed_transcript MGP_BALBcJ_T0029854.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183840 67186229 + Tmem107 protein_coding processed_transcript MGP_BALBcJ_T0029855.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183885 67185992 + Tmem107 protein_coding processed_transcript MGP_BALBcJ_T0029856.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67183903 67185784 + Tmem107 protein_coding processed_transcript MGP_BALBcJ_T0029857.1 MGP_BALBcJ_G0018456.1 mouse_genomes_project 11 67184269 67185528 + Tmem107 protein_coding processed_transcript MGP_BALBcJ_T0033303.1 MGP_BALBcJ_G0019311.1 mouse_genomes_project 11 114199701 114207309 - MGP_BALBcJ_P0033303 Cd300c2 protein_coding protein_coding MGP_BALBcJ_T0033304.1 MGP_BALBcJ_G0019311.1 mouse_genomes_project 11 114199702 114207309 - MGP_BALBcJ_P0033304 Cd300c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006205.1 MGP_BALBcJ_G0005185.1 mouse_genomes_project 11 43776573 43783460 - 2310031A07Rik lincRNA lincRNA MGP_BALBcJ_T0017222.1 MGP_BALBcJ_G0015150.1 mouse_genomes_project 11 104384768 104412139 + Gm11638 processed_transcript processed_transcript MGP_BALBcJ_T0030623.1 MGP_BALBcJ_G0018647.1 mouse_genomes_project 11 73477422 73551228 + MGP_BALBcJ_P0030623 Rtn4rl1 protein_coding protein_coding MGP_BALBcJ_T0030866.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76279704 76328085 + MGP_BALBcJ_P0030866 Sez6 protein_coding protein_coding MGP_BALBcJ_T0030867.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76279743 76328085 + Sez6 protein_coding retained_intron MGP_BALBcJ_T0030868.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76279821 76313171 + Sez6 protein_coding retained_intron MGP_BALBcJ_T0030869.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76279916 76328077 + MGP_BALBcJ_P0030869 Sez6 protein_coding protein_coding MGP_BALBcJ_T0030870.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76279943 76327098 + Sez6 protein_coding retained_intron MGP_BALBcJ_T0030871.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76300502 76303957 + Sez6 protein_coding processed_transcript MGP_BALBcJ_T0030872.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76303047 76328085 + MGP_BALBcJ_P0030872 Sez6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030873.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76318036 76323525 + MGP_BALBcJ_P0030873 Sez6 protein_coding protein_coding MGP_BALBcJ_T0030874.1 MGP_BALBcJ_G0018698.1 mouse_genomes_project 11 76322209 76323411 + Sez6 protein_coding retained_intron MGP_BALBcJ_T0031130.1 MGP_BALBcJ_G0018764.1 mouse_genomes_project 11 80538145 80539701 + MGP_BALBcJ_P0031130 Ccl12 protein_coding protein_coding MGP_BALBcJ_T0031131.1 MGP_BALBcJ_G0018764.1 mouse_genomes_project 11 80538152 80539668 + Ccl12 protein_coding processed_transcript MGP_BALBcJ_T0102152.1 MGP_BALBcJ_G0039969.1 mouse_genomes_project 11 82218252 82219099 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0028806.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930171 47939495 + MGP_BALBcJ_P0028806 Hnrnph1 protein_coding protein_coding MGP_BALBcJ_T0028807.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930900 47939494 + MGP_BALBcJ_P0028807 Hnrnph1 protein_coding protein_coding MGP_BALBcJ_T0028808.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930932 47939495 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028809.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930946 47935788 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028810.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930950 47939103 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028811.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930950 47936374 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028812.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47930950 47939495 + MGP_BALBcJ_P0028812 Hnrnph1 protein_coding protein_coding MGP_BALBcJ_T0028813.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47931472 47935319 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028814.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47931472 47933372 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028815.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47931472 47934152 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028816.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47931482 47939105 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028817.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47936128 47937442 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028818.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47936268 47937215 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028819.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47936360 47939393 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028820.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47936423 47937102 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028821.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47936993 47937875 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0028822.1 MGP_BALBcJ_G0018187.1 mouse_genomes_project 11 47938144 47939393 + Hnrnph1 protein_coding processed_transcript MGP_BALBcJ_T0032971.1 MGP_BALBcJ_G0019237.1 mouse_genomes_project 11 105187723 105188032 + MGP_BALBcJ_P0032971 Gm10840 protein_coding protein_coding MGP_BALBcJ_T0030480.1 MGP_BALBcJ_G0018595.1 mouse_genomes_project 11 71384937 71391885 + MGP_BALBcJ_P0030480 Tax1bp3 protein_coding protein_coding MGP_BALBcJ_T0030481.1 MGP_BALBcJ_G0018595.1 mouse_genomes_project 11 71385105 71388540 + Tax1bp3 protein_coding processed_transcript MGP_BALBcJ_T0030482.1 MGP_BALBcJ_G0018595.1 mouse_genomes_project 11 71385105 71392853 + Tax1bp3 protein_coding retained_intron MGP_BALBcJ_T0030483.1 MGP_BALBcJ_G0018595.1 mouse_genomes_project 11 71385124 71391780 + MGP_BALBcJ_P0030483 Tax1bp3 protein_coding protein_coding MGP_BALBcJ_T0028352.1 MGP_BALBcJ_G0018057.1 mouse_genomes_project 11 27739026 27873426 - MGP_BALBcJ_P0028352 Acyp2 protein_coding protein_coding MGP_BALBcJ_T0003347.1 MGP_BALBcJ_G0003083.1 mouse_genomes_project 11 119928522 119931181 + Notumos antisense antisense MGP_BALBcJ_T0032072.1 MGP_BALBcJ_G0019002.1 mouse_genomes_project 11 97286528 97291550 + MGP_BALBcJ_P0032072 protein_coding protein_coding MGP_BALBcJ_T0032073.1 MGP_BALBcJ_G0019002.1 mouse_genomes_project 11 97287182 97295506 + protein_coding retained_intron MGP_BALBcJ_T0032074.1 MGP_BALBcJ_G0019002.1 mouse_genomes_project 11 97287202 97295506 + protein_coding retained_intron MGP_BALBcJ_T0032075.1 MGP_BALBcJ_G0019002.1 mouse_genomes_project 11 97289255 97295138 + MGP_BALBcJ_P0032075 protein_coding unknown_likely_coding MGP_BALBcJ_T0032076.1 MGP_BALBcJ_G0019002.1 mouse_genomes_project 11 97291974 97293955 + protein_coding retained_intron MGP_BALBcJ_T0032077.1 MGP_BALBcJ_G0019002.1 mouse_genomes_project 11 97293921 97295258 + protein_coding retained_intron MGP_BALBcJ_T0030253.1 MGP_BALBcJ_G0018546.1 mouse_genomes_project 11 68802858 68805773 + MGP_BALBcJ_P0030253 Gp1ba protein_coding protein_coding MGP_BALBcJ_T0030254.1 MGP_BALBcJ_G0018546.1 mouse_genomes_project 11 68802880 68805557 + MGP_BALBcJ_P0030254 Gp1ba protein_coding protein_coding MGP_BALBcJ_T0009662.1 MGP_BALBcJ_G0007787.1 mouse_genomes_project 11 58133732 58133798 - Mir6922 miRNA miRNA MGP_BALBcJ_T0031303.1 MGP_BALBcJ_G0018814.1 mouse_genomes_project 11 83427700 83431578 - MGP_BALBcJ_P0031303 Pigw protein_coding protein_coding MGP_BALBcJ_T0031304.1 MGP_BALBcJ_G0018814.1 mouse_genomes_project 11 83428228 83431668 - MGP_BALBcJ_P0031304 Pigw protein_coding protein_coding MGP_BALBcJ_T0003229.1 MGP_BALBcJ_G0002990.1 mouse_genomes_project 11 84258618 84275552 - Bcas3os1 antisense antisense MGP_BALBcJ_T0003230.1 MGP_BALBcJ_G0002990.1 mouse_genomes_project 11 84260224 84275552 - Bcas3os1 antisense antisense MGP_BALBcJ_T0012608.1 MGP_BALBcJ_G0010705.1 mouse_genomes_project 11 58673902 58674283 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003125.1 MGP_BALBcJ_G0002901.1 mouse_genomes_project 11 33377745 33381414 + Gm12126 antisense antisense MGP_BALBcJ_T0102131.1 MGP_BALBcJ_G0039948.1 mouse_genomes_project 11 43964691 43964964 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0033346.1 MGP_BALBcJ_G0019324.1 mouse_genomes_project 11 114554161 114566306 + MGP_BALBcJ_P0033346 Otop3 protein_coding protein_coding MGP_BALBcJ_T0033347.1 MGP_BALBcJ_G0019324.1 mouse_genomes_project 11 114554164 114566305 + MGP_BALBcJ_P0033347 Otop3 protein_coding protein_coding MGP_BALBcJ_T0028823.1 MGP_BALBcJ_G0018188.1 mouse_genomes_project 11 47942256 48003104 - MGP_BALBcJ_P0028823 Rufy1 protein_coding protein_coding MGP_BALBcJ_T0028824.1 MGP_BALBcJ_G0018188.1 mouse_genomes_project 11 47942343 47986660 - Rufy1 protein_coding processed_transcript MGP_BALBcJ_T0028825.1 MGP_BALBcJ_G0018188.1 mouse_genomes_project 11 47978995 47993970 - Rufy1 protein_coding processed_transcript MGP_BALBcJ_T0009717.1 MGP_BALBcJ_G0007842.1 mouse_genomes_project 11 96569145 96569284 + Mir8102 miRNA miRNA MGP_BALBcJ_T0012518.1 MGP_BALBcJ_G0010615.1 mouse_genomes_project 11 26555559 26555817 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028522.1 MGP_BALBcJ_G0018104.1 mouse_genomes_project 11 38101914 38108400 + MGP_BALBcJ_P0028522 Nudcd2 protein_coding protein_coding MGP_BALBcJ_T0028523.1 MGP_BALBcJ_G0018104.1 mouse_genomes_project 11 38101991 38104772 + Nudcd2 protein_coding processed_transcript MGP_BALBcJ_T0028524.1 MGP_BALBcJ_G0018104.1 mouse_genomes_project 11 38102193 38107904 + MGP_BALBcJ_P0028524 Nudcd2 protein_coding protein_coding MGP_BALBcJ_T0028525.1 MGP_BALBcJ_G0018104.1 mouse_genomes_project 11 38102452 38107837 + Nudcd2 protein_coding processed_transcript MGP_BALBcJ_T0028526.1 MGP_BALBcJ_G0018104.1 mouse_genomes_project 11 38104665 38107618 + Nudcd2 protein_coding processed_transcript MGP_BALBcJ_T0030633.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73693387 73706377 - MGP_BALBcJ_P0030633 Serpinf1 protein_coding protein_coding MGP_BALBcJ_T0030634.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73693682 73701613 - MGP_BALBcJ_P0030634 Serpinf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030635.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73693839 73699347 - MGP_BALBcJ_P0030635 Serpinf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030636.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73697530 73706262 - MGP_BALBcJ_P0030636 Serpinf1 protein_coding protein_coding MGP_BALBcJ_T0030637.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73697589 73698812 - Serpinf1 protein_coding retained_intron MGP_BALBcJ_T0030638.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73698537 73706231 - MGP_BALBcJ_P0030638 Serpinf1 protein_coding protein_coding MGP_BALBcJ_T0030639.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73699086 73706228 - MGP_BALBcJ_P0030639 Serpinf1 protein_coding protein_coding MGP_BALBcJ_T0030640.1 MGP_BALBcJ_G0018650.1 mouse_genomes_project 11 73699932 73701914 - MGP_BALBcJ_P0030640 Serpinf1 protein_coding protein_coding MGP_BALBcJ_T0029931.1 MGP_BALBcJ_G0018476.1 mouse_genomes_project 11 67677409 67683521 - MGP_BALBcJ_P0029931 Efnb3 protein_coding protein_coding MGP_BALBcJ_T0028257.1 MGP_BALBcJ_G0018038.1 mouse_genomes_project 11 23456386 23531603 + MGP_BALBcJ_P0028257 Fancl protein_coding protein_coding MGP_BALBcJ_T0028258.1 MGP_BALBcJ_G0018038.1 mouse_genomes_project 11 23457455 23528853 + Fancl protein_coding processed_transcript MGP_BALBcJ_T0028259.1 MGP_BALBcJ_G0018038.1 mouse_genomes_project 11 23457455 23491576 + MGP_BALBcJ_P0028259 Fancl protein_coding protein_coding MGP_BALBcJ_T0028260.1 MGP_BALBcJ_G0018038.1 mouse_genomes_project 11 23457455 23531148 + MGP_BALBcJ_P0028260 Fancl protein_coding protein_coding MGP_BALBcJ_T0028261.1 MGP_BALBcJ_G0018038.1 mouse_genomes_project 11 23528063 23531157 + MGP_BALBcJ_P0028261 Fancl protein_coding protein_coding MGP_BALBcJ_T0009715.1 MGP_BALBcJ_G0007840.1 mouse_genomes_project 11 96466488 96466559 - Gm24158 miRNA miRNA MGP_BALBcJ_T0033541.1 MGP_BALBcJ_G0019356.1 mouse_genomes_project 11 115325790 115334275 - MGP_BALBcJ_P0033541 Wbp2 protein_coding protein_coding MGP_BALBcJ_T0033542.1 MGP_BALBcJ_G0019356.1 mouse_genomes_project 11 115326469 115334275 - MGP_BALBcJ_P0033542 Wbp2 protein_coding protein_coding MGP_BALBcJ_T0033543.1 MGP_BALBcJ_G0019356.1 mouse_genomes_project 11 115326614 115328703 - Wbp2 protein_coding processed_transcript MGP_BALBcJ_T0033544.1 MGP_BALBcJ_G0019356.1 mouse_genomes_project 11 115329046 115334275 - Wbp2 protein_coding processed_transcript MGP_BALBcJ_T0033545.1 MGP_BALBcJ_G0019356.1 mouse_genomes_project 11 115330281 115334252 - Wbp2 protein_coding processed_transcript MGP_BALBcJ_T0032452.1 MGP_BALBcJ_G0019132.1 mouse_genomes_project 11 100214028 100231348 + MGP_BALBcJ_P0032452 Wnk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032453.1 MGP_BALBcJ_G0019132.1 mouse_genomes_project 11 100214059 100231348 + MGP_BALBcJ_P0032453 Wnk4 protein_coding protein_coding MGP_BALBcJ_T0032454.1 MGP_BALBcJ_G0019132.1 mouse_genomes_project 11 100214116 100231213 + MGP_BALBcJ_P0032454 Wnk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032455.1 MGP_BALBcJ_G0019132.1 mouse_genomes_project 11 100218837 100227956 + MGP_BALBcJ_P0032455 Wnk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032456.1 MGP_BALBcJ_G0019132.1 mouse_genomes_project 11 100230584 100231345 + MGP_BALBcJ_P0032456 Wnk4 protein_coding protein_coding MGP_BALBcJ_T0011272.1 MGP_BALBcJ_G0009397.1 mouse_genomes_project 11 538768 538915 - Gm27640 misc_RNA misc_RNA MGP_BALBcJ_T0012470.1 MGP_BALBcJ_G0010567.1 mouse_genomes_project 11 14035244 14039473 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012584.1 MGP_BALBcJ_G0010681.1 mouse_genomes_project 11 52204557 52204855 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030215.1 MGP_BALBcJ_G0018538.1 mouse_genomes_project 11 68666376 68672309 + MGP_BALBcJ_P0030215 Tm4sf5 protein_coding protein_coding MGP_BALBcJ_T0030216.1 MGP_BALBcJ_G0018538.1 mouse_genomes_project 11 68671100 68672013 + Tm4sf5 protein_coding processed_transcript MGP_BALBcJ_T0030217.1 MGP_BALBcJ_G0018538.1 mouse_genomes_project 11 68671336 68672098 + Tm4sf5 protein_coding retained_intron MGP_BALBcJ_T0003110.1 MGP_BALBcJ_G0002889.1 mouse_genomes_project 11 14990245 14995982 + Etaa1os antisense antisense MGP_BALBcJ_T0003111.1 MGP_BALBcJ_G0002889.1 mouse_genomes_project 11 14990279 14991427 + Etaa1os antisense antisense MGP_BALBcJ_T0006228.1 MGP_BALBcJ_G0005206.1 mouse_genomes_project 11 61445594 61450315 + B130011K05Rik lincRNA lincRNA MGP_BALBcJ_T0028098.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15875667 16015841 - MGP_BALBcJ_P0028098 Meis1 protein_coding protein_coding MGP_BALBcJ_T0028099.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15876278 16015825 - MGP_BALBcJ_P0028099 Meis1 protein_coding protein_coding MGP_BALBcJ_T0028100.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15876278 16015570 - MGP_BALBcJ_P0028100 Meis1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028101.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15876517 16008582 - Meis1 protein_coding processed_transcript MGP_BALBcJ_T0028102.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15876518 16015089 - MGP_BALBcJ_P0028102 Meis1 protein_coding protein_coding MGP_BALBcJ_T0028103.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15877181 16013147 - MGP_BALBcJ_P0028103 Meis1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028104.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 15983491 16015778 - Meis1 protein_coding retained_intron MGP_BALBcJ_T0028105.1 MGP_BALBcJ_G0018002.1 mouse_genomes_project 11 16006481 16015778 - Meis1 protein_coding retained_intron MGP_BALBcJ_T0012487.1 MGP_BALBcJ_G0010584.1 mouse_genomes_project 11 17772213 17772743 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029255.1 MGP_BALBcJ_G0018326.1 mouse_genomes_project 11 56888770 56901901 + MGP_BALBcJ_P0029255 Trim11 protein_coding protein_coding MGP_BALBcJ_T0029256.1 MGP_BALBcJ_G0018326.1 mouse_genomes_project 11 56888792 56901904 + MGP_BALBcJ_P0029256 Trim11 protein_coding protein_coding MGP_BALBcJ_T0029257.1 MGP_BALBcJ_G0018326.1 mouse_genomes_project 11 56888793 56901903 + MGP_BALBcJ_P0029257 Trim11 protein_coding protein_coding MGP_BALBcJ_T0099283.1 MGP_BALBcJ_G0037319.1 mouse_genomes_project 11 92071485 92071592 - Gm24856 snRNA snRNA MGP_BALBcJ_T0006348.1 MGP_BALBcJ_G0005292.1 mouse_genomes_project 11 118332920 118337215 + Gm26508 lincRNA lincRNA MGP_BALBcJ_T0011276.1 MGP_BALBcJ_G0009401.1 mouse_genomes_project 11 48076670 48076946 - Gm23824 misc_RNA misc_RNA MGP_BALBcJ_T0029769.1 MGP_BALBcJ_G0018441.1 mouse_genomes_project 11 66567586 66617636 + MGP_BALBcJ_P0029769 Pik3r6 protein_coding protein_coding MGP_BALBcJ_T0029770.1 MGP_BALBcJ_G0018441.1 mouse_genomes_project 11 66567586 66617636 + MGP_BALBcJ_P0029770 Pik3r6 protein_coding protein_coding MGP_BALBcJ_T0029771.1 MGP_BALBcJ_G0018441.1 mouse_genomes_project 11 66567658 66617636 + Pik3r6 protein_coding processed_transcript MGP_BALBcJ_T0029772.1 MGP_BALBcJ_G0018441.1 mouse_genomes_project 11 66601309 66609315 + Pik3r6 protein_coding processed_transcript MGP_BALBcJ_T0029773.1 MGP_BALBcJ_G0018441.1 mouse_genomes_project 11 66617001 66617634 + Pik3r6 protein_coding processed_transcript MGP_BALBcJ_T0032244.1 MGP_BALBcJ_G0019082.1 mouse_genomes_project 11 99024663 99028283 - MGP_BALBcJ_P0032244 Krt36 protein_coding protein_coding MGP_BALBcJ_T0030892.1 MGP_BALBcJ_G0018702.1 mouse_genomes_project 11 76425809 76435483 - Eral1 protein_coding retained_intron MGP_BALBcJ_T0030893.1 MGP_BALBcJ_G0018702.1 mouse_genomes_project 11 76425809 76435483 - MGP_BALBcJ_P0030893 Eral1 protein_coding protein_coding MGP_BALBcJ_T0030894.1 MGP_BALBcJ_G0018702.1 mouse_genomes_project 11 76426964 76428405 - Eral1 protein_coding retained_intron MGP_BALBcJ_T0030003.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67907392 67926389 + MGP_BALBcJ_P0030003 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0030004.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67907392 67930200 + MGP_BALBcJ_P0030004 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0030005.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67907457 67928128 + MGP_BALBcJ_P0030005 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0030006.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67907479 67924489 + MGP_BALBcJ_P0030006 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0030007.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67907912 67922218 + MGP_BALBcJ_P0030007 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0030008.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67908007 67922202 + MGP_BALBcJ_P0030008 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0030009.1 MGP_BALBcJ_G0018493.1 mouse_genomes_project 11 67921585 67925853 + MGP_BALBcJ_P0030009 Zbtb4 protein_coding protein_coding MGP_BALBcJ_T0031763.1 MGP_BALBcJ_G0018923.1 mouse_genomes_project 11 94118946 94122080 + MGP_BALBcJ_P0031763 Slc35b1 protein_coding protein_coding MGP_BALBcJ_T0031764.1 MGP_BALBcJ_G0018923.1 mouse_genomes_project 11 94119080 94125974 + MGP_BALBcJ_P0031764 Slc35b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031765.1 MGP_BALBcJ_G0018923.1 mouse_genomes_project 11 94119091 94125975 + MGP_BALBcJ_P0031765 Slc35b1 protein_coding protein_coding MGP_BALBcJ_T0031766.1 MGP_BALBcJ_G0018923.1 mouse_genomes_project 11 94119095 94120501 + Slc35b1 protein_coding retained_intron MGP_BALBcJ_T0031767.1 MGP_BALBcJ_G0018923.1 mouse_genomes_project 11 94124174 94124843 + Slc35b1 protein_coding retained_intron MGP_BALBcJ_T0030491.1 MGP_BALBcJ_G0018598.1 mouse_genomes_project 11 71444436 71472641 + MGP_BALBcJ_P0030491 Trpv1 protein_coding protein_coding MGP_BALBcJ_T0030492.1 MGP_BALBcJ_G0018598.1 mouse_genomes_project 11 71448387 71471909 + MGP_BALBcJ_P0030492 Trpv1 protein_coding protein_coding MGP_BALBcJ_T0030493.1 MGP_BALBcJ_G0018598.1 mouse_genomes_project 11 71448387 71471909 + MGP_BALBcJ_P0030493 Trpv1 protein_coding unknown_likely_coding MGP_BALBcJ_T0030494.1 MGP_BALBcJ_G0018598.1 mouse_genomes_project 11 71450166 71472644 + MGP_BALBcJ_P0030494 Trpv1 protein_coding protein_coding MGP_BALBcJ_T0030495.1 MGP_BALBcJ_G0018598.1 mouse_genomes_project 11 71450430 71465335 + MGP_BALBcJ_P0030495 Trpv1 protein_coding protein_coding MGP_BALBcJ_T0030496.1 MGP_BALBcJ_G0018598.1 mouse_genomes_project 11 71462821 71464735 + Trpv1 protein_coding processed_transcript MGP_BALBcJ_T0028230.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20736154 20802846 + MGP_BALBcJ_P0028230 Pus10 protein_coding protein_coding MGP_BALBcJ_T0028231.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20736177 20801495 + MGP_BALBcJ_P0028231 Pus10 protein_coding protein_coding MGP_BALBcJ_T0028232.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20736487 20802846 + MGP_BALBcJ_P0028232 Pus10 protein_coding protein_coding MGP_BALBcJ_T0028233.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20736668 20743866 + Pus10 protein_coding retained_intron MGP_BALBcJ_T0028234.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20736991 20743752 + MGP_BALBcJ_P0028234 Pus10 protein_coding protein_coding MGP_BALBcJ_T0028235.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20787139 20799041 + Pus10 protein_coding retained_intron MGP_BALBcJ_T0028236.1 MGP_BALBcJ_G0018032.1 mouse_genomes_project 11 20788201 20801368 + Pus10 protein_coding retained_intron MGP_BALBcJ_T0012731.1 MGP_BALBcJ_G0010828.1 mouse_genomes_project 11 103584599 103585595 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017167.1 MGP_BALBcJ_G0015117.1 mouse_genomes_project 11 67457900 67460081 + processed_transcript processed_transcript MGP_BALBcJ_T0017168.1 MGP_BALBcJ_G0015117.1 mouse_genomes_project 11 67458248 67458815 + processed_transcript processed_transcript MGP_BALBcJ_T0012697.1 MGP_BALBcJ_G0010794.1 mouse_genomes_project 11 92316204 92317415 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012769.1 MGP_BALBcJ_G0010866.1 mouse_genomes_project 11 120701338 120701673 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032415.1 MGP_BALBcJ_G0019124.1 mouse_genomes_project 11 100071492 100078601 + MGP_BALBcJ_P0032415 Tubg1 protein_coding protein_coding MGP_BALBcJ_T0032416.1 MGP_BALBcJ_G0019124.1 mouse_genomes_project 11 100071695 100078605 + MGP_BALBcJ_P0032416 Tubg1 protein_coding unknown_likely_coding MGP_BALBcJ_T0032417.1 MGP_BALBcJ_G0019124.1 mouse_genomes_project 11 100076054 100078010 + Tubg1 protein_coding processed_transcript MGP_BALBcJ_T0003223.1 MGP_BALBcJ_G0002986.1 mouse_genomes_project 11 80018643 80024761 + Gm11418 antisense antisense MGP_BALBcJ_T0099251.1 MGP_BALBcJ_G0037287.1 mouse_genomes_project 11 55550397 55550500 + Gm24582 snRNA snRNA MGP_BALBcJ_T0012455.1 MGP_BALBcJ_G0010552.1 mouse_genomes_project 11 7226693 7227608 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033333.1 MGP_BALBcJ_G0019319.1 mouse_genomes_project 11 114467999 114484274 - MGP_BALBcJ_P0033333 Grin2c protein_coding protein_coding MGP_BALBcJ_T0033334.1 MGP_BALBcJ_G0019319.1 mouse_genomes_project 11 114467999 114486088 - MGP_BALBcJ_P0033334 Grin2c protein_coding protein_coding MGP_BALBcJ_T0006310.1 MGP_BALBcJ_G0005263.1 mouse_genomes_project 11 101631206 101632861 - Gm11636 lincRNA lincRNA MGP_BALBcJ_T0032939.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104609519 104796825 + MGP_BALBcJ_P0032939 Tanc2 protein_coding protein_coding MGP_BALBcJ_T0032940.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104609524 104953454 + MGP_BALBcJ_P0032940 Tanc2 protein_coding protein_coding MGP_BALBcJ_T0032941.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104609732 104947880 + MGP_BALBcJ_P0032941 Tanc2 protein_coding protein_coding MGP_BALBcJ_T0032942.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104643671 104724230 + Tanc2 protein_coding processed_transcript MGP_BALBcJ_T0032943.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104722216 104723506 + MGP_BALBcJ_P0032943 Tanc2 protein_coding protein_coding MGP_BALBcJ_T0032944.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104915187 104948279 + MGP_BALBcJ_P0032944 Tanc2 protein_coding protein_coding MGP_BALBcJ_T0032945.1 MGP_BALBcJ_G0019228.1 mouse_genomes_project 11 104921075 104935124 + Tanc2 protein_coding processed_transcript MGP_BALBcJ_T0009658.1 MGP_BALBcJ_G0007783.1 mouse_genomes_project 11 53319063 53319119 + Mir7652 miRNA miRNA MGP_BALBcJ_T0031198.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81817941 81851866 + MGP_BALBcJ_P0031198 Ap2b1 protein_coding protein_coding MGP_BALBcJ_T0031199.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81821400 81926482 + MGP_BALBcJ_P0031199 Ap2b1 protein_coding protein_coding MGP_BALBcJ_T0031200.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81821620 81863389 + Ap2b1 protein_coding retained_intron MGP_BALBcJ_T0031201.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81821651 81920044 + MGP_BALBcJ_P0031201 Ap2b1 protein_coding protein_coding MGP_BALBcJ_T0031202.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81821691 81924459 + MGP_BALBcJ_P0031202 Ap2b1 protein_coding protein_coding MGP_BALBcJ_T0031203.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81821869 81835261 + MGP_BALBcJ_P0031203 Ap2b1 protein_coding protein_coding MGP_BALBcJ_T0031204.1 MGP_BALBcJ_G0018785.1 mouse_genomes_project 11 81827155 81924091 + MGP_BALBcJ_P0031204 Ap2b1 protein_coding protein_coding MGP_BALBcJ_T0029794.1 MGP_BALBcJ_G0018446.1 mouse_genomes_project 11 66969613 66976848 + MGP_BALBcJ_P0029794 Rnf222 protein_coding protein_coding MGP_BALBcJ_T0003293.1 MGP_BALBcJ_G0003040.1 mouse_genomes_project 11 103568794 103569728 - Gm11665 antisense antisense MGP_BALBcJ_T0029258.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56904703 56919887 - MGP_BALBcJ_P0029258 Obscn protein_coding unknown_likely_coding MGP_BALBcJ_T0029259.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56904703 56919787 - MGP_BALBcJ_P0029259 Obscn protein_coding unknown_likely_coding MGP_BALBcJ_T0029260.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56904707 57051482 - MGP_BALBcJ_P0029260 Obscn protein_coding protein_coding MGP_BALBcJ_T0029261.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56904710 56944026 - MGP_BALBcJ_P0029261 Obscn protein_coding protein_coding MGP_BALBcJ_T0029262.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56921067 56943999 - MGP_BALBcJ_P0029262 Obscn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029263.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56921067 57051482 - MGP_BALBcJ_P0029263 Obscn protein_coding protein_coding MGP_BALBcJ_T0029264.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56921067 57051445 - MGP_BALBcJ_P0029264 Obscn protein_coding protein_coding MGP_BALBcJ_T0029265.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56921068 56938458 - MGP_BALBcJ_P0029265 Obscn protein_coding protein_coding MGP_BALBcJ_T0029266.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56921581 57051418 - MGP_BALBcJ_P0029266 Obscn protein_coding unknown_likely_coding MGP_BALBcJ_T0029267.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56921581 57051418 - MGP_BALBcJ_P0029267 Obscn protein_coding unknown_likely_coding MGP_BALBcJ_T0029268.1 MGP_BALBcJ_G0018327.1 mouse_genomes_project 11 56982838 56989393 - MGP_BALBcJ_P0029268 Obscn protein_coding protein_coding MGP_BALBcJ_T0028665.1 MGP_BALBcJ_G0018144.1 mouse_genomes_project 11 46138083 46142710 + Rack1 protein_coding retained_intron MGP_BALBcJ_T0028666.1 MGP_BALBcJ_G0018144.1 mouse_genomes_project 11 46138108 46143824 + Rack1 protein_coding processed_transcript MGP_BALBcJ_T0028667.1 MGP_BALBcJ_G0018144.1 mouse_genomes_project 11 46138111 46144170 + MGP_BALBcJ_P0028667 Rack1 protein_coding protein_coding MGP_BALBcJ_T0028668.1 MGP_BALBcJ_G0018144.1 mouse_genomes_project 11 46138125 46140419 + Rack1 protein_coding retained_intron MGP_BALBcJ_T0028669.1 MGP_BALBcJ_G0018144.1 mouse_genomes_project 11 46140903 46143809 + Rack1 protein_coding processed_transcript MGP_BALBcJ_T0028670.1 MGP_BALBcJ_G0018144.1 mouse_genomes_project 11 46143183 46143829 + Rack1 protein_coding processed_transcript MGP_BALBcJ_T0028384.1 MGP_BALBcJ_G0018066.1 mouse_genomes_project 11 29198418 29212514 + MGP_BALBcJ_P0028384 4930524B15Rik protein_coding protein_coding MGP_BALBcJ_T0033319.1 MGP_BALBcJ_G0019316.1 mouse_genomes_project 11 114381896 114399819 + MGP_BALBcJ_P0033319 Slc9a3r1 protein_coding protein_coding MGP_BALBcJ_T0029667.1 MGP_BALBcJ_G0018414.1 mouse_genomes_project 11 63016785 63184157 - MGP_BALBcJ_P0029667 Arhgap44 protein_coding protein_coding MGP_BALBcJ_T0029668.1 MGP_BALBcJ_G0018414.1 mouse_genomes_project 11 63016786 63184100 - MGP_BALBcJ_P0029668 Arhgap44 protein_coding protein_coding MGP_BALBcJ_T0029669.1 MGP_BALBcJ_G0018414.1 mouse_genomes_project 11 63016787 63078400 - MGP_BALBcJ_P0029669 Arhgap44 protein_coding protein_coding MGP_BALBcJ_T0029670.1 MGP_BALBcJ_G0018414.1 mouse_genomes_project 11 63066548 63183767 - MGP_BALBcJ_P0029670 Arhgap44 protein_coding protein_coding MGP_BALBcJ_T0012441.1 MGP_BALBcJ_G0010538.1 mouse_genomes_project 11 3195637 3195981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102138.1 MGP_BALBcJ_G0039955.1 mouse_genomes_project 11 56416953 56417345 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031678.1 MGP_BALBcJ_G0018900.1 mouse_genomes_project 11 93184497 93204795 - Mycbpap protein_coding retained_intron MGP_BALBcJ_T0031679.1 MGP_BALBcJ_G0018900.1 mouse_genomes_project 11 93184497 93186696 - Mycbpap protein_coding processed_transcript MGP_BALBcJ_T0031680.1 MGP_BALBcJ_G0018900.1 mouse_genomes_project 11 93184497 93190473 - MGP_BALBcJ_P0031680 Mycbpap protein_coding protein_coding MGP_BALBcJ_T0031681.1 MGP_BALBcJ_G0018900.1 mouse_genomes_project 11 93184497 93204795 - MGP_BALBcJ_P0031681 Mycbpap protein_coding protein_coding MGP_BALBcJ_T0031682.1 MGP_BALBcJ_G0018900.1 mouse_genomes_project 11 93186130 93186683 - Mycbpap protein_coding retained_intron MGP_BALBcJ_T0031683.1 MGP_BALBcJ_G0018900.1 mouse_genomes_project 11 93190817 93193291 - Mycbpap protein_coding retained_intron MGP_BALBcJ_T0100533.1 MGP_BALBcJ_G0038569.1 mouse_genomes_project 11 78298373 78298505 - Gm24454 snoRNA snoRNA MGP_BALBcJ_T0102136.1 MGP_BALBcJ_G0039953.1 mouse_genomes_project 11 55890273 55899268 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099246.1 MGP_BALBcJ_G0037282.1 mouse_genomes_project 11 45244634 45244795 - Gm23039 snRNA snRNA MGP_BALBcJ_T0012460.1 MGP_BALBcJ_G0010557.1 mouse_genomes_project 11 11150665 11151044 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017099.1 MGP_BALBcJ_G0015083.1 mouse_genomes_project 11 194728 206421 + Gm11944 processed_transcript processed_transcript MGP_BALBcJ_T0003332.1 MGP_BALBcJ_G0003072.1 mouse_genomes_project 11 117032826 117034243 - Gm11724 antisense antisense MGP_BALBcJ_T0003197.1 MGP_BALBcJ_G0002963.1 mouse_genomes_project 11 66648745 66652462 - Ccdc42os antisense antisense MGP_BALBcJ_T0011288.1 MGP_BALBcJ_G0009413.1 mouse_genomes_project 11 93683391 93683507 + Gm24877 misc_RNA misc_RNA MGP_BALBcJ_T0099270.1 MGP_BALBcJ_G0037306.1 mouse_genomes_project 11 78053568 78053676 - Gm24887 snRNA snRNA MGP_BALBcJ_T0030413.1 MGP_BALBcJ_G0018578.1 mouse_genomes_project 11 70576471 70598406 - MGP_BALBcJ_P0030413 Smtnl2 protein_coding protein_coding MGP_BALBcJ_T0030414.1 MGP_BALBcJ_G0018578.1 mouse_genomes_project 11 70585566 70588801 - Smtnl2 protein_coding processed_transcript MGP_BALBcJ_T0030415.1 MGP_BALBcJ_G0018578.1 mouse_genomes_project 11 70587178 70588434 - Smtnl2 protein_coding processed_transcript MGP_BALBcJ_T0017136.1 MGP_BALBcJ_G0015098.1 mouse_genomes_project 11 20625873 20626658 - Gm12060 processed_transcript processed_transcript MGP_BALBcJ_T0099279.1 MGP_BALBcJ_G0037315.1 mouse_genomes_project 11 86022834 86022941 - Gm23137 snRNA snRNA MGP_BALBcJ_T0006270.1 MGP_BALBcJ_G0005236.1 mouse_genomes_project 11 83063709 83074346 + Lhx1os lincRNA lincRNA MGP_BALBcJ_T0006271.1 MGP_BALBcJ_G0005236.1 mouse_genomes_project 11 83063718 83074346 + Lhx1os lincRNA lincRNA MGP_BALBcJ_T0006272.1 MGP_BALBcJ_G0005236.1 mouse_genomes_project 11 83063733 83074345 + Lhx1os lincRNA lincRNA MGP_BALBcJ_T0009640.1 MGP_BALBcJ_G0007765.1 mouse_genomes_project 11 30245057 30245147 - Gm26052 miRNA miRNA MGP_BALBcJ_T0006311.1 MGP_BALBcJ_G0005264.1 mouse_genomes_project 11 101636108 101640944 - 2810433D01Rik lincRNA lincRNA MGP_BALBcJ_T0006312.1 MGP_BALBcJ_G0005264.1 mouse_genomes_project 11 101637843 101640894 - 2810433D01Rik lincRNA lincRNA MGP_BALBcJ_T0003217.1 MGP_BALBcJ_G0002981.1 mouse_genomes_project 11 78084996 78089697 - Rab11fip4os2 antisense antisense MGP_BALBcJ_T0003218.1 MGP_BALBcJ_G0002981.1 mouse_genomes_project 11 78088479 78089743 - Rab11fip4os2 antisense antisense MGP_BALBcJ_T0029904.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67460712 67466050 - Chd3 protein_coding retained_intron MGP_BALBcJ_T0029905.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67460712 67463459 - Chd3 protein_coding retained_intron MGP_BALBcJ_T0029906.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67460712 67487429 - MGP_BALBcJ_P0029906 Chd3 protein_coding protein_coding MGP_BALBcJ_T0029907.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67461790 67487429 - MGP_BALBcJ_P0029907 Chd3 protein_coding protein_coding MGP_BALBcJ_T0029908.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67462575 67482837 - MGP_BALBcJ_P0029908 Chd3 protein_coding protein_coding MGP_BALBcJ_T0029909.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67463575 67464574 - Chd3 protein_coding retained_intron MGP_BALBcJ_T0029910.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67471311 67471909 - Chd3 protein_coding retained_intron MGP_BALBcJ_T0029911.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67471904 67474703 - MGP_BALBcJ_P0029911 Chd3 protein_coding protein_coding MGP_BALBcJ_T0029912.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67478799 67479814 - MGP_BALBcJ_P0029912 Chd3 protein_coding protein_coding MGP_BALBcJ_T0029913.1 MGP_BALBcJ_G0018468.1 mouse_genomes_project 11 67478816 67479814 - MGP_BALBcJ_P0029913 Chd3 protein_coding protein_coding MGP_BALBcJ_T0012743.1 MGP_BALBcJ_G0010840.1 mouse_genomes_project 11 107500491 107500975 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017126.1 MGP_BALBcJ_G0015092.1 mouse_genomes_project 11 15847523 15854016 - 8430419K02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017127.1 MGP_BALBcJ_G0015092.1 mouse_genomes_project 11 15847627 15870189 - 8430419K02Rik processed_transcript processed_transcript MGP_BALBcJ_T0012653.1 MGP_BALBcJ_G0010750.1 mouse_genomes_project 11 75429638 75429967 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029992.1 MGP_BALBcJ_G0018489.1 mouse_genomes_project 11 67809220 67811929 - MGP_BALBcJ_P0029992 Tnfsf13 protein_coding protein_coding MGP_BALBcJ_T0029993.1 MGP_BALBcJ_G0018489.1 mouse_genomes_project 11 67809306 67812159 - MGP_BALBcJ_P0029993 Tnfsf13 protein_coding protein_coding MGP_BALBcJ_T0029018.1 MGP_BALBcJ_G0018243.1 mouse_genomes_project 11 51482761 51487075 + MGP_BALBcJ_P0029018 Il5 protein_coding protein_coding MGP_BALBcJ_T0028798.1 MGP_BALBcJ_G0018184.1 mouse_genomes_project 11 47807762 47845103 - MGP_BALBcJ_P0028798 Maml1 protein_coding protein_coding MGP_BALBcJ_T0003172.1 MGP_BALBcJ_G0002943.1 mouse_genomes_project 11 59527796 59528619 + Gm12272 antisense antisense MGP_BALBcJ_T0003284.1 MGP_BALBcJ_G0003031.1 mouse_genomes_project 11 100966459 100967176 + Gm20659 antisense antisense MGP_BALBcJ_T0028952.1 MGP_BALBcJ_G0018224.1 mouse_genomes_project 11 50071299 50100539 + MGP_BALBcJ_P0028952 Vdac1 protein_coding protein_coding MGP_BALBcJ_T0028953.1 MGP_BALBcJ_G0018224.1 mouse_genomes_project 11 50071574 50099638 + MGP_BALBcJ_P0028953 Vdac1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028954.1 MGP_BALBcJ_G0018224.1 mouse_genomes_project 11 50085243 50087919 + Vdac1 protein_coding processed_transcript MGP_BALBcJ_T0028955.1 MGP_BALBcJ_G0018224.1 mouse_genomes_project 11 50085406 50099665 + MGP_BALBcJ_P0028955 Vdac1 protein_coding protein_coding MGP_BALBcJ_T0028956.1 MGP_BALBcJ_G0018224.1 mouse_genomes_project 11 50098338 50099933 + Vdac1 protein_coding retained_intron MGP_BALBcJ_T0003141.1 MGP_BALBcJ_G0002916.1 mouse_genomes_project 11 49640925 49641984 + Gm12204 antisense antisense MGP_BALBcJ_T0030943.1 MGP_BALBcJ_G0018713.1 mouse_genomes_project 11 76661888 76664793 + MGP_BALBcJ_P0030943 BC030499 protein_coding protein_coding MGP_BALBcJ_T0030944.1 MGP_BALBcJ_G0018713.1 mouse_genomes_project 11 76661939 76666390 + BC030499 protein_coding retained_intron MGP_BALBcJ_T0030945.1 MGP_BALBcJ_G0018713.1 mouse_genomes_project 11 76661941 76664866 + BC030499 protein_coding retained_intron MGP_BALBcJ_T0030946.1 MGP_BALBcJ_G0018713.1 mouse_genomes_project 11 76661976 76664881 + BC030499 protein_coding retained_intron MGP_BALBcJ_T0030947.1 MGP_BALBcJ_G0018713.1 mouse_genomes_project 11 76662603 76663211 + BC030499 protein_coding retained_intron MGP_BALBcJ_T0030948.1 MGP_BALBcJ_G0018713.1 mouse_genomes_project 11 76664854 76667853 + BC030499 protein_coding retained_intron MGP_BALBcJ_T0028883.1 MGP_BALBcJ_G0018207.1 mouse_genomes_project 11 48921937 49214148 + MGP_BALBcJ_P0028883 Col23a1 protein_coding protein_coding MGP_BALBcJ_T0028884.1 MGP_BALBcJ_G0018207.1 mouse_genomes_project 11 48922144 49207897 + MGP_BALBcJ_P0028884 Col23a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0028885.1 MGP_BALBcJ_G0018207.1 mouse_genomes_project 11 48922340 49207897 + MGP_BALBcJ_P0028885 Col23a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0028886.1 MGP_BALBcJ_G0018207.1 mouse_genomes_project 11 49204995 49210529 + MGP_BALBcJ_P0028886 Col23a1 protein_coding protein_coding MGP_BALBcJ_T0030330.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136454 69144076 + MGP_BALBcJ_P0030330 Rpain protein_coding protein_coding MGP_BALBcJ_T0030331.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136468 69138161 + MGP_BALBcJ_P0030331 Rpain protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030332.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136721 69140405 + Rpain protein_coding retained_intron MGP_BALBcJ_T0030333.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136727 69138591 + Rpain protein_coding retained_intron MGP_BALBcJ_T0030334.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136732 69139733 + Rpain protein_coding retained_intron MGP_BALBcJ_T0030335.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136748 69143930 + MGP_BALBcJ_P0030335 Rpain protein_coding protein_coding MGP_BALBcJ_T0030336.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136748 69143930 + MGP_BALBcJ_P0030336 Rpain protein_coding protein_coding MGP_BALBcJ_T0030337.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136748 69143930 + MGP_BALBcJ_P0030337 Rpain protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030338.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136748 69143930 + MGP_BALBcJ_P0030338 Rpain protein_coding protein_coding MGP_BALBcJ_T0030339.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136748 69143930 + MGP_BALBcJ_P0030339 Rpain protein_coding protein_coding MGP_BALBcJ_T0030340.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69136770 69140672 + Rpain protein_coding retained_intron MGP_BALBcJ_T0030341.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69139044 69144048 + Rpain protein_coding retained_intron MGP_BALBcJ_T0030342.1 MGP_BALBcJ_G0018559.1 mouse_genomes_project 11 69140982 69144044 + Rpain protein_coding retained_intron MGP_BALBcJ_T0006337.1 MGP_BALBcJ_G0005284.1 mouse_genomes_project 11 115233827 115239341 - B230344G16Rik lincRNA lincRNA MGP_BALBcJ_T0033306.1 MGP_BALBcJ_G0019313.1 mouse_genomes_project 11 114271355 114281569 - MGP_BALBcJ_P0033306 Cd300e protein_coding protein_coding MGP_BALBcJ_T0102004.1 MGP_BALBcJ_G0039844.1 mouse_genomes_project 11 101751448 101773240 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0033663.1 MGP_BALBcJ_G0019379.1 mouse_genomes_project 11 115923145 115927273 + MGP_BALBcJ_P0033663 1810032O08Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033664.1 MGP_BALBcJ_G0019379.1 mouse_genomes_project 11 115923164 115927283 + MGP_BALBcJ_P0033664 1810032O08Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0033665.1 MGP_BALBcJ_G0019379.1 mouse_genomes_project 11 115923172 115924099 + 1810032O08Rik protein_coding retained_intron MGP_BALBcJ_T0033666.1 MGP_BALBcJ_G0019379.1 mouse_genomes_project 11 115923184 115926064 + MGP_BALBcJ_P0033666 1810032O08Rik protein_coding protein_coding MGP_BALBcJ_T0033667.1 MGP_BALBcJ_G0019379.1 mouse_genomes_project 11 115923357 115925451 + MGP_BALBcJ_P0033667 1810032O08Rik protein_coding protein_coding MGP_BALBcJ_T0033668.1 MGP_BALBcJ_G0019379.1 mouse_genomes_project 11 115924168 115927277 + MGP_BALBcJ_P0033668 1810032O08Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034188.1 MGP_BALBcJ_G0019484.1 mouse_genomes_project 11 120495214 120511343 + MGP_BALBcJ_P0034188 Hexdc protein_coding protein_coding MGP_BALBcJ_T0034189.1 MGP_BALBcJ_G0019484.1 mouse_genomes_project 11 120495216 120511335 + MGP_BALBcJ_P0034189 Hexdc protein_coding protein_coding MGP_BALBcJ_T0034190.1 MGP_BALBcJ_G0019484.1 mouse_genomes_project 11 120495556 120508581 + Hexdc protein_coding processed_transcript MGP_BALBcJ_T0034191.1 MGP_BALBcJ_G0019484.1 mouse_genomes_project 11 120495582 120503961 + Hexdc protein_coding processed_transcript MGP_BALBcJ_T0034192.1 MGP_BALBcJ_G0019484.1 mouse_genomes_project 11 120496599 120511335 + MGP_BALBcJ_P0034192 Hexdc protein_coding protein_coding MGP_BALBcJ_T0034193.1 MGP_BALBcJ_G0019484.1 mouse_genomes_project 11 120500882 120509712 + MGP_BALBcJ_P0034193 Hexdc protein_coding protein_coding MGP_BALBcJ_T0009750.1 MGP_BALBcJ_G0007875.1 mouse_genomes_project 11 119327781 119327893 - Gm25948 miRNA miRNA MGP_BALBcJ_T0100509.1 MGP_BALBcJ_G0038545.1 mouse_genomes_project 11 54082928 54082994 - Gm24253 snoRNA snoRNA MGP_BALBcJ_T0034194.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120511275 120517992 - MGP_BALBcJ_P0034194 BC017643 protein_coding protein_coding MGP_BALBcJ_T0034195.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120511275 120517988 - MGP_BALBcJ_P0034195 BC017643 protein_coding protein_coding MGP_BALBcJ_T0034196.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120512351 120517469 - BC017643 protein_coding retained_intron MGP_BALBcJ_T0034197.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120512634 120516064 - BC017643 protein_coding retained_intron MGP_BALBcJ_T0034198.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120512913 120517778 - MGP_BALBcJ_P0034198 BC017643 protein_coding protein_coding MGP_BALBcJ_T0034199.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120513257 120517918 - MGP_BALBcJ_P0034199 BC017643 protein_coding protein_coding MGP_BALBcJ_T0034200.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120513284 120518005 - MGP_BALBcJ_P0034200 BC017643 protein_coding protein_coding MGP_BALBcJ_T0034201.1 MGP_BALBcJ_G0019485.1 mouse_genomes_project 11 120515452 120517906 - BC017643 protein_coding processed_transcript MGP_BALBcJ_T0030774.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266096 75267126 + Blmh protein_coding retained_intron MGP_BALBcJ_T0030775.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266106 75288692 + Blmh protein_coding retained_intron MGP_BALBcJ_T0030776.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266188 75287709 + MGP_BALBcJ_P0030776 Blmh protein_coding protein_coding MGP_BALBcJ_T0030777.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266218 75307931 + MGP_BALBcJ_P0030777 Blmh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030778.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266248 75308486 + MGP_BALBcJ_P0030778 Blmh protein_coding protein_coding MGP_BALBcJ_T0030779.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266414 75274946 + MGP_BALBcJ_P0030779 Blmh protein_coding protein_coding MGP_BALBcJ_T0030780.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75266435 75272900 + MGP_BALBcJ_P0030780 Blmh protein_coding protein_coding MGP_BALBcJ_T0030781.1 MGP_BALBcJ_G0018681.1 mouse_genomes_project 11 75282135 75286746 + Blmh protein_coding processed_transcript MGP_BALBcJ_T0003279.1 MGP_BALBcJ_G0003026.1 mouse_genomes_project 11 100294302 100303741 - Gm28156 antisense antisense MGP_BALBcJ_T0028737.1 MGP_BALBcJ_G0018163.1 mouse_genomes_project 11 46824445 46825558 + MGP_BALBcJ_P0028737 protein_coding protein_coding MGP_BALBcJ_T0031010.1 MGP_BALBcJ_G0018731.1 mouse_genomes_project 11 77320064 77359022 + MGP_BALBcJ_P0031010 Nos2 protein_coding unknown_likely_coding MGP_BALBcJ_T0031011.1 MGP_BALBcJ_G0018731.1 mouse_genomes_project 11 77322996 77359027 + MGP_BALBcJ_P0031011 Nos2 protein_coding unknown_likely_coding MGP_BALBcJ_T0030355.1 MGP_BALBcJ_G0018562.1 mouse_genomes_project 11 69173101 69185469 - MGP_BALBcJ_P0030355 Derl2 protein_coding protein_coding MGP_BALBcJ_T0030356.1 MGP_BALBcJ_G0018562.1 mouse_genomes_project 11 69173380 69185463 - MGP_BALBcJ_P0030356 Derl2 protein_coding protein_coding MGP_BALBcJ_T0030357.1 MGP_BALBcJ_G0018562.1 mouse_genomes_project 11 69176289 69185496 - MGP_BALBcJ_P0030357 Derl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030358.1 MGP_BALBcJ_G0018562.1 mouse_genomes_project 11 69178060 69185470 - Derl2 protein_coding retained_intron MGP_BALBcJ_T0030359.1 MGP_BALBcJ_G0018562.1 mouse_genomes_project 11 69179345 69185502 - MGP_BALBcJ_P0030359 Derl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030360.1 MGP_BALBcJ_G0018562.1 mouse_genomes_project 11 69180789 69185439 - MGP_BALBcJ_P0030360 Derl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099285.1 MGP_BALBcJ_G0037321.1 mouse_genomes_project 11 94678010 94678135 + Gm24725 snRNA snRNA MGP_BALBcJ_T0028745.1 MGP_BALBcJ_G0018171.1 mouse_genomes_project 11 47103426 47104494 + MGP_BALBcJ_P0028745 Olfr1382 protein_coding protein_coding MGP_BALBcJ_T0012650.1 MGP_BALBcJ_G0010747.1 mouse_genomes_project 11 73711281 73711681 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009719.1 MGP_BALBcJ_G0007844.1 mouse_genomes_project 11 96860998 96861078 + Gm27597 miRNA miRNA MGP_BALBcJ_T0029253.1 MGP_BALBcJ_G0018324.1 mouse_genomes_project 11 56863209 56865356 + MGP_BALBcJ_P0029253 Hist3h2a protein_coding protein_coding MGP_BALBcJ_T0003340.1 MGP_BALBcJ_G0003080.1 mouse_genomes_project 11 119753364 119756354 - Gm11788 antisense antisense MGP_BALBcJ_T0012723.1 MGP_BALBcJ_G0010820.1 mouse_genomes_project 11 101109959 101110284 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030444.1 MGP_BALBcJ_G0018585.1 mouse_genomes_project 11 70979382 70998002 - MGP_BALBcJ_P0030444 Cyb5d2 protein_coding protein_coding MGP_BALBcJ_T0030445.1 MGP_BALBcJ_G0018585.1 mouse_genomes_project 11 70979395 70997848 - MGP_BALBcJ_P0030445 Cyb5d2 protein_coding protein_coding MGP_BALBcJ_T0030446.1 MGP_BALBcJ_G0018585.1 mouse_genomes_project 11 70981028 70998240 - Cyb5d2 protein_coding processed_transcript MGP_BALBcJ_T0030447.1 MGP_BALBcJ_G0018585.1 mouse_genomes_project 11 70995034 70997987 - Cyb5d2 protein_coding retained_intron MGP_BALBcJ_T0012517.1 MGP_BALBcJ_G0010614.1 mouse_genomes_project 11 26540843 26541048 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029801.1 MGP_BALBcJ_G0018448.1 mouse_genomes_project 11 67003166 67017107 - MGP_BALBcJ_P0029801 Odf4 protein_coding protein_coding MGP_BALBcJ_T0029802.1 MGP_BALBcJ_G0018448.1 mouse_genomes_project 11 67003167 67017139 - MGP_BALBcJ_P0029802 Odf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029803.1 MGP_BALBcJ_G0018448.1 mouse_genomes_project 11 67003294 67016874 - MGP_BALBcJ_P0029803 Odf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029804.1 MGP_BALBcJ_G0018448.1 mouse_genomes_project 11 67005411 67017132 - MGP_BALBcJ_P0029804 Odf4 protein_coding protein_coding MGP_BALBcJ_T0032024.1 MGP_BALBcJ_G0018989.1 mouse_genomes_project 11 96858542 96859733 + Rpl19 protein_coding retained_intron MGP_BALBcJ_T0032025.1 MGP_BALBcJ_G0018989.1 mouse_genomes_project 11 96858571 96862068 + MGP_BALBcJ_P0032025 Rpl19 protein_coding protein_coding MGP_BALBcJ_T0031630.1 MGP_BALBcJ_G0018893.1 mouse_genomes_project 11 92952527 92956552 + MGP_BALBcJ_P0031630 protein_coding unknown_likely_coding MGP_BALBcJ_T0031631.1 MGP_BALBcJ_G0018893.1 mouse_genomes_project 11 92952560 92956552 + MGP_BALBcJ_P0031631 protein_coding unknown_likely_coding MGP_BALBcJ_T0031632.1 MGP_BALBcJ_G0018893.1 mouse_genomes_project 11 92955224 92956552 + MGP_BALBcJ_P0031632 protein_coding protein_coding MGP_BALBcJ_T0031842.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251242 95547270 + MGP_BALBcJ_P0031842 Skap1 protein_coding protein_coding MGP_BALBcJ_T0031843.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251242 95547459 + MGP_BALBcJ_P0031843 Skap1 protein_coding protein_coding MGP_BALBcJ_T0031844.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251249 95280926 + MGP_BALBcJ_P0031844 Skap1 protein_coding protein_coding MGP_BALBcJ_T0031845.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251273 95521049 + Skap1 protein_coding retained_intron MGP_BALBcJ_T0031846.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251276 95547270 + MGP_BALBcJ_P0031846 Skap1 protein_coding protein_coding MGP_BALBcJ_T0031847.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251282 95367493 + MGP_BALBcJ_P0031847 Skap1 protein_coding protein_coding MGP_BALBcJ_T0031848.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95251330 95467077 + MGP_BALBcJ_P0031848 Skap1 protein_coding protein_coding MGP_BALBcJ_T0031849.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95270966 95280926 + Skap1 protein_coding processed_transcript MGP_BALBcJ_T0031850.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95277161 95493389 + Skap1 protein_coding retained_intron MGP_BALBcJ_T0031851.1 MGP_BALBcJ_G0018951.1 mouse_genomes_project 11 95497192 95502130 + Skap1 protein_coding retained_intron MGP_BALBcJ_T0006347.1 MGP_BALBcJ_G0005291.1 mouse_genomes_project 11 118042633 118045085 + Gm11750 lincRNA lincRNA MGP_BALBcJ_T0032750.1 MGP_BALBcJ_G0019186.1 mouse_genomes_project 11 101820447 101840699 - MGP_BALBcJ_P0032750 Gjc1 protein_coding protein_coding MGP_BALBcJ_T0032751.1 MGP_BALBcJ_G0019186.1 mouse_genomes_project 11 101820447 101825646 - MGP_BALBcJ_P0032751 Gjc1 protein_coding protein_coding MGP_BALBcJ_T0032752.1 MGP_BALBcJ_G0019186.1 mouse_genomes_project 11 101820447 101840178 - MGP_BALBcJ_P0032752 Gjc1 protein_coding protein_coding MGP_BALBcJ_T0032753.1 MGP_BALBcJ_G0019186.1 mouse_genomes_project 11 101821599 101826541 - Gjc1 protein_coding retained_intron MGP_BALBcJ_T0032754.1 MGP_BALBcJ_G0019186.1 mouse_genomes_project 11 101822044 101840209 - Gjc1 protein_coding processed_transcript MGP_BALBcJ_T0009698.1 MGP_BALBcJ_G0007823.1 mouse_genomes_project 11 78141022 78141134 + Mir365-2 miRNA miRNA MGP_BALBcJ_T0009685.1 MGP_BALBcJ_G0007810.1 mouse_genomes_project 11 71156042 71156129 + Gm44467 miRNA miRNA MGP_BALBcJ_T0012472.1 MGP_BALBcJ_G0010569.1 mouse_genomes_project 11 14314634 14315477 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030808.1 MGP_BALBcJ_G0018687.1 mouse_genomes_project 11 75798509 75804841 - MGP_BALBcJ_P0030808 Ankrd13b protein_coding protein_coding MGP_BALBcJ_T0030809.1 MGP_BALBcJ_G0018687.1 mouse_genomes_project 11 75798509 75818071 - MGP_BALBcJ_P0030809 Ankrd13b protein_coding protein_coding MGP_BALBcJ_T0030810.1 MGP_BALBcJ_G0018687.1 mouse_genomes_project 11 75798511 75801650 - Ankrd13b protein_coding retained_intron MGP_BALBcJ_T0030811.1 MGP_BALBcJ_G0018687.1 mouse_genomes_project 11 75798511 75818083 - MGP_BALBcJ_P0030811 Ankrd13b protein_coding protein_coding MGP_BALBcJ_T0030812.1 MGP_BALBcJ_G0018687.1 mouse_genomes_project 11 75800139 75805170 - Ankrd13b protein_coding retained_intron MGP_BALBcJ_T0030813.1 MGP_BALBcJ_G0018687.1 mouse_genomes_project 11 75800796 75804652 - MGP_BALBcJ_P0030813 Ankrd13b protein_coding protein_coding MGP_BALBcJ_T0030920.1 MGP_BALBcJ_G0018708.1 mouse_genomes_project 11 76556433 76559836 + MGP_BALBcJ_P0030920 Rab34 protein_coding protein_coding MGP_BALBcJ_T0030921.1 MGP_BALBcJ_G0018708.1 mouse_genomes_project 11 76556872 76560183 + MGP_BALBcJ_P0030921 Rab34 protein_coding protein_coding MGP_BALBcJ_T0030922.1 MGP_BALBcJ_G0018708.1 mouse_genomes_project 11 76557233 76558300 + Rab34 protein_coding retained_intron MGP_BALBcJ_T0030923.1 MGP_BALBcJ_G0018708.1 mouse_genomes_project 11 76557330 76560194 + MGP_BALBcJ_P0030923 Rab34 protein_coding protein_coding MGP_BALBcJ_T0030924.1 MGP_BALBcJ_G0018708.1 mouse_genomes_project 11 76557581 76559112 + Rab34 protein_coding retained_intron MGP_BALBcJ_T0030925.1 MGP_BALBcJ_G0018708.1 mouse_genomes_project 11 76558346 76558927 + Rab34 protein_coding retained_intron MGP_BALBcJ_T0003182.1 MGP_BALBcJ_G0002952.1 mouse_genomes_project 11 60942979 60946535 - Tvp23bos antisense antisense MGP_BALBcJ_T0031974.1 MGP_BALBcJ_G0018978.1 mouse_genomes_project 11 96526901 96537563 + MGP_BALBcJ_P0031974 Psmb3 protein_coding protein_coding MGP_BALBcJ_T0031975.1 MGP_BALBcJ_G0018978.1 mouse_genomes_project 11 96526936 96532144 + Psmb3 protein_coding retained_intron MGP_BALBcJ_T0031976.1 MGP_BALBcJ_G0018978.1 mouse_genomes_project 11 96536144 96537563 + Psmb3 protein_coding retained_intron MGP_BALBcJ_T0027871.1 MGP_BALBcJ_G0017947.1 mouse_genomes_project 11 2748675 2760979 + MGP_BALBcJ_P0027871 Dbnl protein_coding protein_coding MGP_BALBcJ_T0027872.1 MGP_BALBcJ_G0017947.1 mouse_genomes_project 11 2748709 2760637 + MGP_BALBcJ_P0027872 Dbnl protein_coding protein_coding MGP_BALBcJ_T0027873.1 MGP_BALBcJ_G0017947.1 mouse_genomes_project 11 2748717 2761312 + MGP_BALBcJ_P0027873 Dbnl protein_coding protein_coding MGP_BALBcJ_T0003260.1 MGP_BALBcJ_G0003012.1 mouse_genomes_project 11 95713180 95716518 - Gm11525 antisense antisense MGP_BALBcJ_T0029747.1 MGP_BALBcJ_G0018436.1 mouse_genomes_project 11 65907973 65973702 - MGP_BALBcJ_P0029747 Usp43 protein_coding protein_coding MGP_BALBcJ_T0029748.1 MGP_BALBcJ_G0018436.1 mouse_genomes_project 11 65907973 65973702 - MGP_BALBcJ_P0029748 Usp43 protein_coding protein_coding MGP_BALBcJ_T0029749.1 MGP_BALBcJ_G0018436.1 mouse_genomes_project 11 65908807 65927423 - Usp43 protein_coding retained_intron MGP_BALBcJ_T0029750.1 MGP_BALBcJ_G0018436.1 mouse_genomes_project 11 65948418 65972758 - Usp43 protein_coding processed_transcript MGP_BALBcJ_T0029254.1 MGP_BALBcJ_G0018325.1 mouse_genomes_project 11 56874384 56882295 + MGP_BALBcJ_P0029254 Trim17 protein_coding protein_coding MGP_BALBcJ_T0027748.1 MGP_BALBcJ_G0017921.1 mouse_genomes_project 11 1150391 1153636 + Osm protein_coding processed_transcript MGP_BALBcJ_T0027749.1 MGP_BALBcJ_G0017921.1 mouse_genomes_project 11 1150391 1154998 + MGP_BALBcJ_P0027749 Osm protein_coding protein_coding MGP_BALBcJ_T0029074.1 MGP_BALBcJ_G0018255.1 mouse_genomes_project 11 52178345 52228409 + Meikin protein_coding retained_intron MGP_BALBcJ_T0029075.1 MGP_BALBcJ_G0018255.1 mouse_genomes_project 11 52178345 52228444 + MGP_BALBcJ_P0029075 Meikin protein_coding protein_coding MGP_BALBcJ_T0032353.1 MGP_BALBcJ_G0019112.1 mouse_genomes_project 11 99704725 99709699 - MGP_BALBcJ_P0032353 Ghdc protein_coding protein_coding MGP_BALBcJ_T0032354.1 MGP_BALBcJ_G0019112.1 mouse_genomes_project 11 99705592 99707455 - Ghdc protein_coding processed_transcript MGP_BALBcJ_T0032355.1 MGP_BALBcJ_G0019112.1 mouse_genomes_project 11 99708433 99709684 - MGP_BALBcJ_P0032355 Ghdc protein_coding protein_coding MGP_BALBcJ_T0029914.1 MGP_BALBcJ_G0018469.1 mouse_genomes_project 11 67482075 67487429 + MGP_BALBcJ_P0029914 Gm17305 protein_coding protein_coding MGP_BALBcJ_T0012610.1 MGP_BALBcJ_G0010707.1 mouse_genomes_project 11 58799458 58800169 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032930.1 MGP_BALBcJ_G0019226.1 mouse_genomes_project 11 104311739 104346059 + Mrc2 protein_coding processed_transcript MGP_BALBcJ_T0032931.1 MGP_BALBcJ_G0019226.1 mouse_genomes_project 11 104311742 104372354 + MGP_BALBcJ_P0032931 Mrc2 protein_coding protein_coding MGP_BALBcJ_T0032932.1 MGP_BALBcJ_G0019226.1 mouse_genomes_project 11 104311764 104364372 + MGP_BALBcJ_P0032932 Mrc2 protein_coding protein_coding MGP_BALBcJ_T0032933.1 MGP_BALBcJ_G0019226.1 mouse_genomes_project 11 104348219 104351467 + Mrc2 protein_coding processed_transcript MGP_BALBcJ_T0032934.1 MGP_BALBcJ_G0019226.1 mouse_genomes_project 11 104360829 104363142 + Mrc2 protein_coding retained_intron MGP_BALBcJ_T0032810.1 MGP_BALBcJ_G0019199.1 mouse_genomes_project 11 102146145 102152523 + MGP_BALBcJ_P0032810 Hexim2 protein_coding protein_coding MGP_BALBcJ_T0032811.1 MGP_BALBcJ_G0019199.1 mouse_genomes_project 11 102147026 102153216 + MGP_BALBcJ_P0032811 Hexim2 protein_coding protein_coding MGP_BALBcJ_T0032812.1 MGP_BALBcJ_G0019199.1 mouse_genomes_project 11 102147051 102152671 + MGP_BALBcJ_P0032812 Hexim2 protein_coding protein_coding MGP_BALBcJ_T0032813.1 MGP_BALBcJ_G0019199.1 mouse_genomes_project 11 102147057 102153901 + MGP_BALBcJ_P0032813 Hexim2 protein_coding protein_coding MGP_BALBcJ_T0032814.1 MGP_BALBcJ_G0019199.1 mouse_genomes_project 11 102147577 102152304 + MGP_BALBcJ_P0032814 Hexim2 protein_coding protein_coding MGP_BALBcJ_T0029775.1 MGP_BALBcJ_G0018443.1 mouse_genomes_project 11 66652525 66663432 + MGP_BALBcJ_P0029775 Ccdc42 protein_coding protein_coding MGP_BALBcJ_T0029776.1 MGP_BALBcJ_G0018443.1 mouse_genomes_project 11 66652637 66663411 + MGP_BALBcJ_P0029776 Ccdc42 protein_coding protein_coding MGP_BALBcJ_T0029777.1 MGP_BALBcJ_G0018443.1 mouse_genomes_project 11 66659539 66663420 + MGP_BALBcJ_P0029777 Ccdc42 protein_coding protein_coding MGP_BALBcJ_T0006163.1 MGP_BALBcJ_G0005150.1 mouse_genomes_project 11 20217033 20233638 + 1700061J23Rik lincRNA lincRNA MGP_BALBcJ_T0003291.1 MGP_BALBcJ_G0003038.1 mouse_genomes_project 11 102381071 102382510 + Arhgap27os1 antisense antisense MGP_BALBcJ_T0098824.1 MGP_BALBcJ_G0036876.1 mouse_genomes_project 11 96325315 96327599 - Gm11611 sense_intronic sense_intronic MGP_BALBcJ_T0032225.1 MGP_BALBcJ_G0019065.1 mouse_genomes_project 11 98776788 98777964 + MGP_BALBcJ_P0032225 protein_coding protein_coding MGP_BALBcJ_T0017196.1 MGP_BALBcJ_G0015131.1 mouse_genomes_project 11 93356443 93366478 + Gm11542 processed_transcript processed_transcript MGP_BALBcJ_T0006214.1 MGP_BALBcJ_G0005193.1 mouse_genomes_project 11 51979356 52016988 - 4933405E24Rik lincRNA lincRNA MGP_BALBcJ_T0029189.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56142431 56150647 - MGP_BALBcJ_P0029189 Zfp672 protein_coding protein_coding MGP_BALBcJ_T0029190.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56142441 56150624 - MGP_BALBcJ_P0029190 Zfp672 protein_coding protein_coding MGP_BALBcJ_T0029191.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56142532 56150414 - MGP_BALBcJ_P0029191 Zfp672 protein_coding protein_coding MGP_BALBcJ_T0029192.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56144541 56157653 - MGP_BALBcJ_P0029192 Zfp672 protein_coding protein_coding MGP_BALBcJ_T0029193.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56144643 56147263 - MGP_BALBcJ_P0029193 Zfp672 protein_coding protein_coding MGP_BALBcJ_T0029194.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56147012 56150615 - Zfp672 protein_coding processed_transcript MGP_BALBcJ_T0029195.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56147046 56150615 - Zfp672 protein_coding processed_transcript MGP_BALBcJ_T0029196.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56154533 56157661 - Zfp672 protein_coding retained_intron MGP_BALBcJ_T0029197.1 MGP_BALBcJ_G0018290.1 mouse_genomes_project 11 56155038 56157661 - MGP_BALBcJ_P0029197 Zfp672 protein_coding protein_coding MGP_BALBcJ_T0029230.1 MGP_BALBcJ_G0018309.1 mouse_genomes_project 11 56550889 56551912 + MGP_BALBcJ_P0029230 Olfr319 protein_coding protein_coding MGP_BALBcJ_T0028432.1 MGP_BALBcJ_G0018076.1 mouse_genomes_project 11 29598484 29680476 + MGP_BALBcJ_P0028432 Sh3pxd2b protein_coding protein_coding MGP_BALBcJ_T0028433.1 MGP_BALBcJ_G0018076.1 mouse_genomes_project 11 29598504 29642349 + Sh3pxd2b protein_coding retained_intron MGP_BALBcJ_T0033335.1 MGP_BALBcJ_G0019320.1 mouse_genomes_project 11 114486868 114495770 - Fdxr protein_coding processed_transcript MGP_BALBcJ_T0033336.1 MGP_BALBcJ_G0019320.1 mouse_genomes_project 11 114486868 114495906 - MGP_BALBcJ_P0033336 Fdxr protein_coding protein_coding MGP_BALBcJ_T0033337.1 MGP_BALBcJ_G0019320.1 mouse_genomes_project 11 114487192 114487859 - Fdxr protein_coding processed_transcript MGP_BALBcJ_T0033338.1 MGP_BALBcJ_G0019320.1 mouse_genomes_project 11 114490682 114495580 - Fdxr protein_coding processed_transcript MGP_BALBcJ_T0006258.1 MGP_BALBcJ_G0005230.1 mouse_genomes_project 11 78192505 78193414 - 9130204K15Rik lincRNA lincRNA MGP_BALBcJ_T0006259.1 MGP_BALBcJ_G0005230.1 mouse_genomes_project 11 78192572 78281458 - 9130204K15Rik lincRNA lincRNA MGP_BALBcJ_T0006260.1 MGP_BALBcJ_G0005230.1 mouse_genomes_project 11 78193035 78269943 - 9130204K15Rik lincRNA lincRNA MGP_BALBcJ_T0006261.1 MGP_BALBcJ_G0005230.1 mouse_genomes_project 11 78206938 78215827 - 9130204K15Rik lincRNA lincRNA MGP_BALBcJ_T0006193.1 MGP_BALBcJ_G0005174.1 mouse_genomes_project 11 35798865 35825291 - Gm12130 lincRNA lincRNA MGP_BALBcJ_T0033586.1 MGP_BALBcJ_G0019364.1 mouse_genomes_project 11 115497085 115526112 - Srp68 protein_coding processed_transcript MGP_BALBcJ_T0033587.1 MGP_BALBcJ_G0019364.1 mouse_genomes_project 11 115497085 115526112 - MGP_BALBcJ_P0033587 Srp68 protein_coding protein_coding MGP_BALBcJ_T0033588.1 MGP_BALBcJ_G0019364.1 mouse_genomes_project 11 115497085 115526030 - MGP_BALBcJ_P0033588 Srp68 protein_coding protein_coding MGP_BALBcJ_T0033589.1 MGP_BALBcJ_G0019364.1 mouse_genomes_project 11 115500706 115513246 - Srp68 protein_coding processed_transcript MGP_BALBcJ_T0012539.1 MGP_BALBcJ_G0010636.1 mouse_genomes_project 11 33082058 33082737 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012699.1 MGP_BALBcJ_G0010796.1 mouse_genomes_project 11 93909321 93909730 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028804.1 MGP_BALBcJ_G0018186.1 mouse_genomes_project 11 47907739 47912977 + MGP_BALBcJ_P0028804 Cby3 protein_coding protein_coding MGP_BALBcJ_T0028805.1 MGP_BALBcJ_G0018186.1 mouse_genomes_project 11 47911038 47912977 + MGP_BALBcJ_P0028805 Cby3 protein_coding protein_coding MGP_BALBcJ_T0012596.1 MGP_BALBcJ_G0010693.1 mouse_genomes_project 11 56014723 56015997 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029309.1 MGP_BALBcJ_G0018341.1 mouse_genomes_project 11 57464069 57490283 + MGP_BALBcJ_P0029309 Nlrp3 protein_coding protein_coding MGP_BALBcJ_T0029310.1 MGP_BALBcJ_G0018341.1 mouse_genomes_project 11 57465187 57490284 + MGP_BALBcJ_P0029310 Nlrp3 protein_coding protein_coding MGP_BALBcJ_T0029311.1 MGP_BALBcJ_G0018341.1 mouse_genomes_project 11 57465257 57471782 + MGP_BALBcJ_P0029311 Nlrp3 protein_coding protein_coding MGP_BALBcJ_T0003299.1 MGP_BALBcJ_G0003045.1 mouse_genomes_project 11 105152039 105153460 - Gm11672 antisense antisense MGP_BALBcJ_T0028826.1 MGP_BALBcJ_G0018189.1 mouse_genomes_project 11 48167324 48378611 + MGP_BALBcJ_P0028826 Adamts2 protein_coding protein_coding MGP_BALBcJ_T0028827.1 MGP_BALBcJ_G0018189.1 mouse_genomes_project 11 48168046 48368731 + MGP_BALBcJ_P0028827 Adamts2 protein_coding unknown_likely_coding MGP_BALBcJ_T0028828.1 MGP_BALBcJ_G0018189.1 mouse_genomes_project 11 48346742 48347579 + Adamts2 protein_coding processed_transcript MGP_BALBcJ_T0028829.1 MGP_BALBcJ_G0018189.1 mouse_genomes_project 11 48352212 48353241 + Adamts2 protein_coding processed_transcript MGP_BALBcJ_T0028830.1 MGP_BALBcJ_G0018189.1 mouse_genomes_project 11 48365808 48368738 + Adamts2 protein_coding processed_transcript MGP_BALBcJ_T0017153.1 MGP_BALBcJ_G0015110.1 mouse_genomes_project 11 57115783 57118103 - 2610507I01Rik processed_transcript processed_transcript MGP_BALBcJ_T0029991.1 MGP_BALBcJ_G0018488.1 mouse_genomes_project 11 67808951 67822848 - MGP_BALBcJ_P0029991 Tnfsfm13 protein_coding protein_coding MGP_BALBcJ_T0029994.1 MGP_BALBcJ_G0018488.1 mouse_genomes_project 11 67809422 67822560 - MGP_BALBcJ_P0029994 Tnfsfm13 protein_coding protein_coding MGP_BALBcJ_T0029995.1 MGP_BALBcJ_G0018488.1 mouse_genomes_project 11 67809605 67822559 - MGP_BALBcJ_P0029995 Tnfsfm13 protein_coding protein_coding MGP_BALBcJ_T0033777.1 MGP_BALBcJ_G0019403.1 mouse_genomes_project 11 117231379 117268999 + MGP_BALBcJ_P0033777 Pgs1 protein_coding protein_coding MGP_BALBcJ_T0033778.1 MGP_BALBcJ_G0019403.1 mouse_genomes_project 11 117231972 117268999 + MGP_BALBcJ_P0033778 Pgs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033779.1 MGP_BALBcJ_G0019403.1 mouse_genomes_project 11 117245822 117268913 + MGP_BALBcJ_P0033779 Pgs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033780.1 MGP_BALBcJ_G0019403.1 mouse_genomes_project 11 117257334 117268999 + Pgs1 protein_coding retained_intron MGP_BALBcJ_T0003338.1 MGP_BALBcJ_G0003078.1 mouse_genomes_project 11 119477013 119478925 - Gm11770 antisense antisense MGP_BALBcJ_T0029116.1 MGP_BALBcJ_G0018263.1 mouse_genomes_project 11 52788419 52843219 - MGP_BALBcJ_P0029116 Anxa6 protein_coding protein_coding MGP_BALBcJ_T0029117.1 MGP_BALBcJ_G0018263.1 mouse_genomes_project 11 52788419 52843219 - MGP_BALBcJ_P0029117 Anxa6 protein_coding protein_coding MGP_BALBcJ_T0029118.1 MGP_BALBcJ_G0018263.1 mouse_genomes_project 11 52800261 52843189 - Anxa6 protein_coding processed_transcript MGP_BALBcJ_T0012507.1 MGP_BALBcJ_G0010604.1 mouse_genomes_project 11 23771936 23772405 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030708.1 MGP_BALBcJ_G0018665.1 mouse_genomes_project 11 74306885 74310543 + MGP_BALBcJ_P0030708 1700016K19Rik protein_coding protein_coding MGP_BALBcJ_T0031233.1 MGP_BALBcJ_G0018797.1 mouse_genomes_project 11 82192027 82194127 + MGP_BALBcJ_P0031233 Ccl4 protein_coding protein_coding MGP_BALBcJ_T0009730.1 MGP_BALBcJ_G0007855.1 mouse_genomes_project 11 102022164 102022238 - Mir6931 miRNA miRNA MGP_BALBcJ_T0030504.1 MGP_BALBcJ_G0018601.1 mouse_genomes_project 11 71541780 71557032 + MGP_BALBcJ_P0030504 Spata22 protein_coding protein_coding MGP_BALBcJ_T0030505.1 MGP_BALBcJ_G0018601.1 mouse_genomes_project 11 71541780 71568745 + MGP_BALBcJ_P0030505 Spata22 protein_coding protein_coding MGP_BALBcJ_T0033055.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105838119 105867544 + MGP_BALBcJ_P0033055 Cep95 protein_coding protein_coding MGP_BALBcJ_T0033056.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105838142 105867537 + MGP_BALBcJ_P0033056 Cep95 protein_coding protein_coding MGP_BALBcJ_T0033057.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105838154 105840136 + Cep95 protein_coding processed_transcript MGP_BALBcJ_T0033058.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105860997 105862523 + Cep95 protein_coding processed_transcript MGP_BALBcJ_T0033059.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105862906 105864462 + Cep95 protein_coding processed_transcript MGP_BALBcJ_T0033060.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105866517 105867545 + Cep95 protein_coding processed_transcript MGP_BALBcJ_T0033061.1 MGP_BALBcJ_G0019256.1 mouse_genomes_project 11 105866562 105868614 + MGP_BALBcJ_P0033061 Cep95 protein_coding protein_coding MGP_BALBcJ_T0032313.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99518203 99520172 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0032314.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99518203 99555878 - MGP_BALBcJ_P0032314 Dnajc7 protein_coding protein_coding MGP_BALBcJ_T0032315.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99518649 99520878 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0032316.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99519725 99526348 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0032317.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99526206 99555287 - MGP_BALBcJ_P0032317 Dnajc7 protein_coding protein_coding MGP_BALBcJ_T0032318.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99526213 99555308 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0032319.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99526338 99532033 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0032320.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99528283 99549195 - MGP_BALBcJ_P0032320 Dnajc7 protein_coding protein_coding MGP_BALBcJ_T0032321.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99532751 99555290 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0032322.1 MGP_BALBcJ_G0019103.1 mouse_genomes_project 11 99533660 99555370 - Dnajc7 protein_coding processed_transcript MGP_BALBcJ_T0012639.1 MGP_BALBcJ_G0010736.1 mouse_genomes_project 11 69231963 69233521 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012740.1 MGP_BALBcJ_G0010837.1 mouse_genomes_project 11 106222731 106223064 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012681.1 MGP_BALBcJ_G0010778.1 mouse_genomes_project 11 84509992 84510471 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028895.1 MGP_BALBcJ_G0018209.1 mouse_genomes_project 11 49230261 49237007 - MGP_BALBcJ_P0028895 Hnrnpab protein_coding protein_coding MGP_BALBcJ_T0028896.1 MGP_BALBcJ_G0018209.1 mouse_genomes_project 11 49231030 49237007 - MGP_BALBcJ_P0028896 Hnrnpab protein_coding protein_coding MGP_BALBcJ_T0028897.1 MGP_BALBcJ_G0018209.1 mouse_genomes_project 11 49231335 49237007 - MGP_BALBcJ_P0028897 Hnrnpab protein_coding protein_coding MGP_BALBcJ_T0031143.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227330 81249085 + MGP_BALBcJ_P0031143 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031144.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227357 81250488 + MGP_BALBcJ_P0031144 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031145.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227364 81242764 + Lig3 protein_coding retained_intron MGP_BALBcJ_T0031146.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227407 81246876 + MGP_BALBcJ_P0031146 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031147.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227415 81248248 + MGP_BALBcJ_P0031147 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031148.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227415 81248249 + MGP_BALBcJ_P0031148 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031149.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227420 81236527 + MGP_BALBcJ_P0031149 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031150.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227420 81236528 + MGP_BALBcJ_P0031150 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031151.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81227425 81250412 + MGP_BALBcJ_P0031151 Lig3 protein_coding protein_coding MGP_BALBcJ_T0031152.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81241907 81245773 + Lig3 protein_coding retained_intron MGP_BALBcJ_T0031153.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81243440 81245790 + Lig3 protein_coding retained_intron MGP_BALBcJ_T0031154.1 MGP_BALBcJ_G0018770.1 mouse_genomes_project 11 81244571 81250488 + MGP_BALBcJ_P0031154 Lig3 protein_coding protein_coding MGP_BALBcJ_T0033150.1 MGP_BALBcJ_G0019274.1 mouse_genomes_project 11 108515182 108521659 + MGP_BALBcJ_P0033150 9930022D16Rik protein_coding protein_coding MGP_BALBcJ_T0098819.1 MGP_BALBcJ_G0036872.1 mouse_genomes_project 11 66332400 66333722 - Gm12305 sense_intronic sense_intronic MGP_BALBcJ_T0031068.1 MGP_BALBcJ_G0018746.1 mouse_genomes_project 11 78547546 78553043 - MGP_BALBcJ_P0031068 Tefm protein_coding protein_coding MGP_BALBcJ_T0031069.1 MGP_BALBcJ_G0018746.1 mouse_genomes_project 11 78547546 78550777 - MGP_BALBcJ_P0031069 Tefm protein_coding protein_coding MGP_BALBcJ_T0031070.1 MGP_BALBcJ_G0018746.1 mouse_genomes_project 11 78548814 78553011 - MGP_BALBcJ_P0031070 Tefm protein_coding protein_coding MGP_BALBcJ_T0003234.1 MGP_BALBcJ_G0002993.1 mouse_genomes_project 11 85677145 85682484 - Gm11491 antisense antisense MGP_BALBcJ_T0003235.1 MGP_BALBcJ_G0002993.1 mouse_genomes_project 11 85677363 85682537 - Gm11491 antisense antisense MGP_BALBcJ_T0009630.1 MGP_BALBcJ_G0007755.1 mouse_genomes_project 11 18386814 18386902 - Mir1933 miRNA miRNA MGP_BALBcJ_T0012447.1 MGP_BALBcJ_G0010544.1 mouse_genomes_project 11 3708101 3708679 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012637.1 MGP_BALBcJ_G0010734.1 mouse_genomes_project 11 69045380 69046590 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032174.1 MGP_BALBcJ_G0019025.1 mouse_genomes_project 11 98001768 98013129 - MGP_BALBcJ_P0032174 Ccr7 protein_coding protein_coding MGP_BALBcJ_T0029155.1 MGP_BALBcJ_G0018277.1 mouse_genomes_project 11 55330527 55346877 + MGP_BALBcJ_P0029155 Mfap3 protein_coding protein_coding MGP_BALBcJ_T0029156.1 MGP_BALBcJ_G0018277.1 mouse_genomes_project 11 55330549 55341530 + Mfap3 protein_coding retained_intron MGP_BALBcJ_T0029157.1 MGP_BALBcJ_G0018277.1 mouse_genomes_project 11 55330550 55346876 + MGP_BALBcJ_P0029157 Mfap3 protein_coding protein_coding MGP_BALBcJ_T0029158.1 MGP_BALBcJ_G0018277.1 mouse_genomes_project 11 55334821 55342607 + MGP_BALBcJ_P0029158 Mfap3 protein_coding protein_coding MGP_BALBcJ_T0031270.1 MGP_BALBcJ_G0018808.1 mouse_genomes_project 11 82686828 82706503 - MGP_BALBcJ_P0031270 Gm11437 protein_coding protein_coding MGP_BALBcJ_T0017199.1 MGP_BALBcJ_G0015134.1 mouse_genomes_project 11 95654137 95665648 - Gm11523 processed_transcript lincRNA MGP_BALBcJ_T0017200.1 MGP_BALBcJ_G0015134.1 mouse_genomes_project 11 95654430 95665654 - Gm11523 processed_transcript lincRNA MGP_BALBcJ_T0017201.1 MGP_BALBcJ_G0015134.1 mouse_genomes_project 11 95654559 95665634 - Gm11523 processed_transcript antisense MGP_BALBcJ_T0032242.1 MGP_BALBcJ_G0019081.1 mouse_genomes_project 11 99014849 99018884 - MGP_BALBcJ_P0032242 Krt35 protein_coding protein_coding MGP_BALBcJ_T0032243.1 MGP_BALBcJ_G0019081.1 mouse_genomes_project 11 99014851 99018900 - Krt35 protein_coding retained_intron MGP_BALBcJ_T0031876.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95699690 95710413 - MGP_BALBcJ_P0031876 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031877.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95699690 95710413 - MGP_BALBcJ_P0031877 Cdk5rap3 protein_coding protein_coding MGP_BALBcJ_T0031878.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95700080 95701023 - Cdk5rap3 protein_coding retained_intron MGP_BALBcJ_T0031879.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95703719 95705133 - Cdk5rap3 protein_coding retained_intron MGP_BALBcJ_T0031880.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704208 95710309 - MGP_BALBcJ_P0031880 Cdk5rap3 protein_coding protein_coding MGP_BALBcJ_T0031881.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704225 95710024 - MGP_BALBcJ_P0031881 Cdk5rap3 protein_coding protein_coding MGP_BALBcJ_T0031882.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704247 95710346 - MGP_BALBcJ_P0031882 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031883.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704480 95710283 - MGP_BALBcJ_P0031883 Cdk5rap3 protein_coding protein_coding MGP_BALBcJ_T0031884.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704501 95710331 - MGP_BALBcJ_P0031884 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031885.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704611 95710331 - MGP_BALBcJ_P0031885 Cdk5rap3 protein_coding protein_coding MGP_BALBcJ_T0031886.1 MGP_BALBcJ_G0018956.1 mouse_genomes_project 11 95704948 95710284 - Cdk5rap3 protein_coding retained_intron MGP_BALBcJ_T0029287.1 MGP_BALBcJ_G0018334.1 mouse_genomes_project 11 57167238 57210129 - MGP_BALBcJ_P0029287 Wnt3a protein_coding protein_coding MGP_BALBcJ_T0003262.1 MGP_BALBcJ_G0003014.1 mouse_genomes_project 11 96078726 96081416 + Gm11592 antisense antisense MGP_BALBcJ_T0033297.1 MGP_BALBcJ_G0019307.1 mouse_genomes_project 11 114155585 114170925 - Cd300c protein_coding processed_transcript MGP_BALBcJ_T0033298.1 MGP_BALBcJ_G0019307.1 mouse_genomes_project 11 114155737 114159814 - MGP_BALBcJ_P0033298 Cd300c protein_coding protein_coding MGP_BALBcJ_T0033299.1 MGP_BALBcJ_G0019307.1 mouse_genomes_project 11 114155747 114159814 - MGP_BALBcJ_P0033299 Cd300c protein_coding protein_coding MGP_BALBcJ_T0029740.1 MGP_BALBcJ_G0018434.1 mouse_genomes_project 11 65826685 65842350 + MGP_BALBcJ_P0029740 Gsg1l2 protein_coding protein_coding MGP_BALBcJ_T0029741.1 MGP_BALBcJ_G0018434.1 mouse_genomes_project 11 65833016 65837794 + MGP_BALBcJ_P0029741 Gsg1l2 protein_coding protein_coding MGP_BALBcJ_T0030732.1 MGP_BALBcJ_G0018670.1 mouse_genomes_project 11 74543870 74544309 - MGP_BALBcJ_P0030732 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029236.1 MGP_BALBcJ_G0018314.1 mouse_genomes_project 11 56648026 56652082 + MGP_BALBcJ_P0029236 Olfr314 protein_coding protein_coding MGP_BALBcJ_T0029237.1 MGP_BALBcJ_G0018314.1 mouse_genomes_project 11 56651200 56652331 + MGP_BALBcJ_P0029237 Olfr314 protein_coding protein_coding MGP_BALBcJ_T0029849.1 MGP_BALBcJ_G0018455.1 mouse_genomes_project 11 67172322 67174184 + MGP_BALBcJ_P0029849 Borcs6 protein_coding protein_coding MGP_BALBcJ_T0012464.1 MGP_BALBcJ_G0010561.1 mouse_genomes_project 11 11786428 11787175 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099235.1 MGP_BALBcJ_G0037271.1 mouse_genomes_project 11 19929029 19929133 + Gm24917 snRNA snRNA MGP_BALBcJ_T0032755.1 MGP_BALBcJ_G0019187.1 mouse_genomes_project 11 101856592 101858784 + MGP_BALBcJ_P0032755 Higd1b protein_coding protein_coding MGP_BALBcJ_T0032756.1 MGP_BALBcJ_G0019187.1 mouse_genomes_project 11 101857039 101858784 + MGP_BALBcJ_P0032756 Higd1b protein_coding protein_coding MGP_BALBcJ_T0032757.1 MGP_BALBcJ_G0019187.1 mouse_genomes_project 11 101857189 101858784 + MGP_BALBcJ_P0032757 Higd1b protein_coding protein_coding MGP_BALBcJ_T0003165.1 MGP_BALBcJ_G0002938.1 mouse_genomes_project 11 57734549 57742951 + Gm16062 antisense antisense MGP_BALBcJ_T0029513.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59517290 59579892 - MGP_BALBcJ_P0029513 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029514.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59517290 59579876 - MGP_BALBcJ_P0029514 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029515.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59517290 59579876 - MGP_BALBcJ_P0029515 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029516.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59517290 59579892 - MGP_BALBcJ_P0029516 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029517.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59517291 59579894 - MGP_BALBcJ_P0029517 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029518.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59517291 59579894 - MGP_BALBcJ_P0029518 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029519.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59519459 59553585 - MGP_BALBcJ_P0029519 Epn2 protein_coding unknown_likely_coding MGP_BALBcJ_T0029520.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59523208 59546418 - MGP_BALBcJ_P0029520 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029521.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59532710 59544358 - MGP_BALBcJ_P0029521 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029522.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59534438 59546587 - Epn2 protein_coding retained_intron MGP_BALBcJ_T0029523.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59546550 59579865 - MGP_BALBcJ_P0029523 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029524.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59546736 59579865 - MGP_BALBcJ_P0029524 Epn2 protein_coding protein_coding MGP_BALBcJ_T0029525.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59546793 59579869 - Epn2 protein_coding processed_transcript MGP_BALBcJ_T0029526.1 MGP_BALBcJ_G0018382.1 mouse_genomes_project 11 59555444 59579877 - Epn2 protein_coding processed_transcript MGP_BALBcJ_T0034178.1 MGP_BALBcJ_G0019479.1 mouse_genomes_project 11 120360050 120368828 - MGP_BALBcJ_P0034178 Sectm1a protein_coding protein_coding MGP_BALBcJ_T0034179.1 MGP_BALBcJ_G0019479.1 mouse_genomes_project 11 120360050 120368909 - MGP_BALBcJ_P0034179 Sectm1a protein_coding protein_coding MGP_BALBcJ_T0034180.1 MGP_BALBcJ_G0019479.1 mouse_genomes_project 11 120360560 120368825 - MGP_BALBcJ_P0034180 Sectm1a protein_coding protein_coding MGP_BALBcJ_T0034181.1 MGP_BALBcJ_G0019479.1 mouse_genomes_project 11 120360578 120368819 - MGP_BALBcJ_P0034181 Sectm1a protein_coding protein_coding MGP_BALBcJ_T0034182.1 MGP_BALBcJ_G0019479.1 mouse_genomes_project 11 120361679 120368814 - Sectm1a protein_coding processed_transcript MGP_BALBcJ_T0009631.1 MGP_BALBcJ_G0007756.1 mouse_genomes_project 11 18624933 18625068 - Gm22990 miRNA miRNA MGP_BALBcJ_T0006185.1 MGP_BALBcJ_G0005166.1 mouse_genomes_project 11 29332419 29338375 - Gm12108 lincRNA lincRNA MGP_BALBcJ_T0028407.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29467773 29511678 - MGP_BALBcJ_P0028407 Nprl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028412.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29473408 29498585 - Nprl3 protein_coding processed_transcript MGP_BALBcJ_T0028413.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29473408 29511678 - MGP_BALBcJ_P0028413 Nprl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028414.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29474108 29511696 - MGP_BALBcJ_P0028414 Nprl3 protein_coding protein_coding MGP_BALBcJ_T0028415.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29474199 29511647 - MGP_BALBcJ_P0028415 Nprl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028416.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29475080 29476583 - Nprl3 protein_coding retained_intron MGP_BALBcJ_T0028417.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29475088 29511618 - MGP_BALBcJ_P0028417 Nprl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028418.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29475096 29511536 - MGP_BALBcJ_P0028418 Nprl3 protein_coding protein_coding MGP_BALBcJ_T0028419.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29479028 29482122 - Nprl3 protein_coding retained_intron MGP_BALBcJ_T0028420.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29479074 29480217 - Nprl3 protein_coding retained_intron MGP_BALBcJ_T0028421.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29481980 29496231 - Nprl3 protein_coding retained_intron MGP_BALBcJ_T0028422.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29482043 29511647 - MGP_BALBcJ_P0028422 Nprl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028423.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29483837 29492350 - Nprl3 protein_coding processed_transcript MGP_BALBcJ_T0028424.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29489952 29492450 - Nprl3 protein_coding processed_transcript MGP_BALBcJ_T0028425.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29492334 29511604 - MGP_BALBcJ_P0028425 Nprl3 protein_coding protein_coding MGP_BALBcJ_T0028426.1 MGP_BALBcJ_G0018071.1 mouse_genomes_project 11 29506100 29511540 - Nprl3 protein_coding processed_transcript MGP_BALBcJ_T0032788.1 MGP_BALBcJ_G0019196.1 mouse_genomes_project 11 102093142 102115476 - MGP_BALBcJ_P0032788 Plcd3 protein_coding protein_coding MGP_BALBcJ_T0032789.1 MGP_BALBcJ_G0019196.1 mouse_genomes_project 11 102093142 102101133 - MGP_BALBcJ_P0032789 Plcd3 protein_coding protein_coding MGP_BALBcJ_T0032790.1 MGP_BALBcJ_G0019196.1 mouse_genomes_project 11 102093423 102094589 - Plcd3 protein_coding processed_transcript MGP_BALBcJ_T0032791.1 MGP_BALBcJ_G0019196.1 mouse_genomes_project 11 102103363 102115436 - Plcd3 protein_coding processed_transcript MGP_BALBcJ_T0032792.1 MGP_BALBcJ_G0019196.1 mouse_genomes_project 11 102104538 102115409 - Plcd3 protein_coding processed_transcript MGP_BALBcJ_T0099291.1 MGP_BALBcJ_G0037327.1 mouse_genomes_project 11 98774535 98774632 + Gm26324 snRNA snRNA MGP_BALBcJ_T0028549.1 MGP_BALBcJ_G0018111.1 mouse_genomes_project 11 40473599 40483184 + Atp10b protein_coding processed_transcript MGP_BALBcJ_T0028550.1 MGP_BALBcJ_G0018111.1 mouse_genomes_project 11 40475310 40584997 + MGP_BALBcJ_P0028550 Atp10b protein_coding protein_coding MGP_BALBcJ_T0028551.1 MGP_BALBcJ_G0018111.1 mouse_genomes_project 11 40479573 40525761 + Atp10b protein_coding processed_transcript MGP_BALBcJ_T0028661.1 MGP_BALBcJ_G0018143.1 mouse_genomes_project 11 44226012 44910190 - MGP_BALBcJ_P0028661 Sgcd protein_coding protein_coding MGP_BALBcJ_T0028662.1 MGP_BALBcJ_G0018143.1 mouse_genomes_project 11 44306493 44721230 - MGP_BALBcJ_P0028662 Sgcd protein_coding protein_coding MGP_BALBcJ_T0028663.1 MGP_BALBcJ_G0018143.1 mouse_genomes_project 11 44692657 44972071 - Sgcd protein_coding processed_transcript MGP_BALBcJ_T0028664.1 MGP_BALBcJ_G0018143.1 mouse_genomes_project 11 44910029 45324344 - Sgcd protein_coding processed_transcript MGP_BALBcJ_T0032053.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97195532 97219765 + MGP_BALBcJ_P0032053 Stard3 protein_coding protein_coding MGP_BALBcJ_T0032054.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97195594 97215496 + Stard3 protein_coding processed_transcript MGP_BALBcJ_T0032055.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97195595 97219778 + Stard3 protein_coding processed_transcript MGP_BALBcJ_T0032056.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97195608 97215501 + Stard3 protein_coding processed_transcript MGP_BALBcJ_T0032057.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97214185 97217314 + Stard3 protein_coding processed_transcript MGP_BALBcJ_T0032058.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97215112 97216895 + Stard3 protein_coding processed_transcript MGP_BALBcJ_T0032059.1 MGP_BALBcJ_G0018996.1 mouse_genomes_project 11 97216821 97218014 + Stard3 protein_coding processed_transcript MGP_BALBcJ_T0012682.1 MGP_BALBcJ_G0010779.1 mouse_genomes_project 11 84741127 84741816 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033301.1 MGP_BALBcJ_G0019309.1 mouse_genomes_project 11 114181526 114243691 - MGP_BALBcJ_P0033301 protein_coding protein_coding MGP_BALBcJ_T0032088.1 MGP_BALBcJ_G0019005.1 mouse_genomes_project 11 97423199 97430041 - MGP_BALBcJ_P0032088 Ormdl3 protein_coding protein_coding MGP_BALBcJ_T0029247.1 MGP_BALBcJ_G0018321.1 mouse_genomes_project 11 56826145 56834806 + MGP_BALBcJ_P0029247 protein_coding protein_coding MGP_BALBcJ_T0029248.1 MGP_BALBcJ_G0018321.1 mouse_genomes_project 11 56826191 56835349 + MGP_BALBcJ_P0029248 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029249.1 MGP_BALBcJ_G0018321.1 mouse_genomes_project 11 56826296 56835156 + MGP_BALBcJ_P0029249 protein_coding protein_coding MGP_BALBcJ_T0029250.1 MGP_BALBcJ_G0018321.1 mouse_genomes_project 11 56826296 56835156 + MGP_BALBcJ_P0029250 protein_coding protein_coding MGP_BALBcJ_T0099233.1 MGP_BALBcJ_G0037269.1 mouse_genomes_project 11 15739072 15739174 + Gm23093 snRNA snRNA MGP_BALBcJ_T0027750.1 MGP_BALBcJ_G0017922.1 mouse_genomes_project 11 1173461 1188937 + MGP_BALBcJ_P0027750 Lif protein_coding protein_coding MGP_BALBcJ_T0027751.1 MGP_BALBcJ_G0017922.1 mouse_genomes_project 11 1183218 1184672 + Lif protein_coding processed_transcript MGP_BALBcJ_T0027752.1 MGP_BALBcJ_G0017922.1 mouse_genomes_project 11 1183517 1188937 + MGP_BALBcJ_P0027752 Lif protein_coding protein_coding MGP_BALBcJ_T0028850.1 MGP_BALBcJ_G0018195.1 mouse_genomes_project 11 48493001 48502910 - MGP_BALBcJ_P0028850 Zfp354b protein_coding protein_coding MGP_BALBcJ_T0028851.1 MGP_BALBcJ_G0018195.1 mouse_genomes_project 11 48499234 48502872 - MGP_BALBcJ_P0028851 Zfp354b protein_coding unknown_likely_coding MGP_BALBcJ_T0028852.1 MGP_BALBcJ_G0018195.1 mouse_genomes_project 11 48499849 48501926 - Zfp354b protein_coding processed_transcript MGP_BALBcJ_T0034221.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120738182 120904262 + MGP_BALBcJ_P0034221 Tbcd protein_coding protein_coding MGP_BALBcJ_T0034222.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120774563 120783231 + MGP_BALBcJ_P0034222 Tbcd protein_coding protein_coding MGP_BALBcJ_T0034223.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120786215 120864256 + MGP_BALBcJ_P0034223 Tbcd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034225.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120830685 120878774 + Tbcd protein_coding processed_transcript MGP_BALBcJ_T0034226.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120836631 120878751 + Tbcd protein_coding retained_intron MGP_BALBcJ_T0034227.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120886687 120904261 + Tbcd protein_coding retained_intron MGP_BALBcJ_T0034228.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120889990 120904261 + Tbcd protein_coding processed_transcript MGP_BALBcJ_T0034229.1 MGP_BALBcJ_G0019492.1 mouse_genomes_project 11 120890076 120904261 + Tbcd protein_coding processed_transcript MGP_BALBcJ_T0032608.1 MGP_BALBcJ_G0019166.1 mouse_genomes_project 11 101159975 101187209 - MGP_BALBcJ_P0032608 Lsm12 protein_coding protein_coding MGP_BALBcJ_T0032609.1 MGP_BALBcJ_G0019166.1 mouse_genomes_project 11 101159975 101187276 - MGP_BALBcJ_P0032609 Lsm12 protein_coding protein_coding MGP_BALBcJ_T0032610.1 MGP_BALBcJ_G0019166.1 mouse_genomes_project 11 101161419 101184820 - Lsm12 protein_coding processed_transcript MGP_BALBcJ_T0032611.1 MGP_BALBcJ_G0019166.1 mouse_genomes_project 11 101164853 101187237 - Lsm12 protein_coding processed_transcript MGP_BALBcJ_T0032612.1 MGP_BALBcJ_G0019166.1 mouse_genomes_project 11 101167878 101187241 - Lsm12 protein_coding processed_transcript MGP_BALBcJ_T0099253.1 MGP_BALBcJ_G0037289.1 mouse_genomes_project 11 59330974 59331081 + Gm25929 snRNA snRNA MGP_BALBcJ_T0032238.1 MGP_BALBcJ_G0019078.1 mouse_genomes_project 11 98960299 98964507 - MGP_BALBcJ_P0032238 Krt34 protein_coding protein_coding MGP_BALBcJ_T0031211.1 MGP_BALBcJ_G0018788.1 mouse_genomes_project 11 81959076 81962419 + MGP_BALBcJ_P0031211 1700020L24Rik protein_coding protein_coding MGP_BALBcJ_T0031212.1 MGP_BALBcJ_G0018788.1 mouse_genomes_project 11 81961472 81962014 + MGP_BALBcJ_P0031212 1700020L24Rik protein_coding protein_coding MGP_BALBcJ_T0003176.1 MGP_BALBcJ_G0002947.1 mouse_genomes_project 11 60578743 60580650 - Gm12280 antisense antisense MGP_BALBcJ_T0032068.1 MGP_BALBcJ_G0019000.1 mouse_genomes_project 11 97252493 97277752 + MGP_BALBcJ_P0032068 Erbb2 protein_coding protein_coding MGP_BALBcJ_T0032069.1 MGP_BALBcJ_G0019000.1 mouse_genomes_project 11 97252516 97277113 + Erbb2 protein_coding processed_transcript MGP_BALBcJ_T0032070.1 MGP_BALBcJ_G0019000.1 mouse_genomes_project 11 97267082 97267575 + Erbb2 protein_coding processed_transcript MGP_BALBcJ_T0033546.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115353246 115355654 - Trim47 protein_coding processed_transcript MGP_BALBcJ_T0033547.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115353246 115357772 - MGP_BALBcJ_P0033547 Trim47 protein_coding protein_coding MGP_BALBcJ_T0033548.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115353246 115357781 - MGP_BALBcJ_P0033548 Trim47 protein_coding protein_coding MGP_BALBcJ_T0033549.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115353703 115354618 - Trim47 protein_coding processed_transcript MGP_BALBcJ_T0033550.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115353833 115355275 - Trim47 protein_coding processed_transcript MGP_BALBcJ_T0033551.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115353886 115355570 - Trim47 protein_coding processed_transcript MGP_BALBcJ_T0033552.1 MGP_BALBcJ_G0019357.1 mouse_genomes_project 11 115355345 115374895 - Trim47 protein_coding processed_transcript MGP_BALBcJ_T0033197.1 MGP_BALBcJ_G0019285.1 mouse_genomes_project 11 109290662 109369154 - MGP_BALBcJ_P0033197 Abca6 protein_coding protein_coding MGP_BALBcJ_T0033198.1 MGP_BALBcJ_G0019285.1 mouse_genomes_project 11 109353764 109369154 - Abca6 protein_coding processed_transcript MGP_BALBcJ_T0009714.1 MGP_BALBcJ_G0007839.1 mouse_genomes_project 11 95945009 95945065 - Mir7235 miRNA miRNA MGP_BALBcJ_T0003304.1 MGP_BALBcJ_G0003049.1 mouse_genomes_project 11 106205396 106217980 + Gm11715 antisense antisense MGP_BALBcJ_T0034129.1 MGP_BALBcJ_G0019470.1 mouse_genomes_project 11 120048729 120052035 - Rfng protein_coding processed_transcript MGP_BALBcJ_T0034130.1 MGP_BALBcJ_G0019470.1 mouse_genomes_project 11 120048731 120052057 - MGP_BALBcJ_P0034130 Rfng protein_coding protein_coding MGP_BALBcJ_T0003215.1 MGP_BALBcJ_G0002979.1 mouse_genomes_project 11 77893939 77896246 - AU040972 antisense antisense MGP_BALBcJ_T0033645.1 MGP_BALBcJ_G0019374.1 mouse_genomes_project 11 115789201 115795480 - Ube2o protein_coding processed_transcript MGP_BALBcJ_T0033646.1 MGP_BALBcJ_G0019374.1 mouse_genomes_project 11 115789201 115831658 - MGP_BALBcJ_P0033646 Ube2o protein_coding protein_coding MGP_BALBcJ_T0033647.1 MGP_BALBcJ_G0019374.1 mouse_genomes_project 11 115797166 115800274 - Ube2o protein_coding processed_transcript MGP_BALBcJ_T0029788.1 MGP_BALBcJ_G0018445.1 mouse_genomes_project 11 66892433 66934236 - MGP_BALBcJ_P0029788 Ndel1 protein_coding protein_coding MGP_BALBcJ_T0029789.1 MGP_BALBcJ_G0018445.1 mouse_genomes_project 11 66893109 66920687 - Ndel1 protein_coding processed_transcript MGP_BALBcJ_T0029790.1 MGP_BALBcJ_G0018445.1 mouse_genomes_project 11 66901286 66952984 - MGP_BALBcJ_P0029790 Ndel1 protein_coding protein_coding MGP_BALBcJ_T0029791.1 MGP_BALBcJ_G0018445.1 mouse_genomes_project 11 66901301 66934142 - MGP_BALBcJ_P0029791 Ndel1 protein_coding protein_coding MGP_BALBcJ_T0029792.1 MGP_BALBcJ_G0018445.1 mouse_genomes_project 11 66909958 66941160 - Ndel1 protein_coding processed_transcript MGP_BALBcJ_T0029793.1 MGP_BALBcJ_G0018445.1 mouse_genomes_project 11 66920680 66946161 - Ndel1 protein_coding processed_transcript MGP_BALBcJ_T0031919.1 MGP_BALBcJ_G0018967.1 mouse_genomes_project 11 95958458 95986907 - MGP_BALBcJ_P0031919 protein_coding protein_coding MGP_BALBcJ_T0031920.1 MGP_BALBcJ_G0018967.1 mouse_genomes_project 11 95961254 95963057 - protein_coding retained_intron MGP_BALBcJ_T0031921.1 MGP_BALBcJ_G0018967.1 mouse_genomes_project 11 95963055 95964235 - protein_coding retained_intron MGP_BALBcJ_T0028712.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666018 46681280 + MGP_BALBcJ_P0028712 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028713.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666022 46678007 + MGP_BALBcJ_P0028713 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028714.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666211 46676363 + Zfp62 protein_coding processed_transcript MGP_BALBcJ_T0028715.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666211 46677637 + Zfp62 protein_coding retained_intron MGP_BALBcJ_T0028716.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666211 46677838 + MGP_BALBcJ_P0028716 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028717.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666224 46681543 + MGP_BALBcJ_P0028717 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028718.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666232 46678397 + MGP_BALBcJ_P0028718 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028719.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46666460 46677904 + MGP_BALBcJ_P0028719 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028720.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46667045 46680490 + MGP_BALBcJ_P0028720 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028721.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46675414 46681536 + MGP_BALBcJ_P0028721 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028722.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46676318 46678050 + MGP_BALBcJ_P0028722 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0028723.1 MGP_BALBcJ_G0018161.1 mouse_genomes_project 11 46677275 46681536 + MGP_BALBcJ_P0028723 Zfp62 protein_coding protein_coding MGP_BALBcJ_T0099256.1 MGP_BALBcJ_G0037292.1 mouse_genomes_project 11 66990712 66990815 + Gm22608 snRNA snRNA MGP_BALBcJ_T0029939.1 MGP_BALBcJ_G0018479.1 mouse_genomes_project 11 67723980 67730074 - MGP_BALBcJ_P0029939 Atp1b2 protein_coding protein_coding MGP_BALBcJ_T0029940.1 MGP_BALBcJ_G0018479.1 mouse_genomes_project 11 67723985 67730187 - Atp1b2 protein_coding processed_transcript MGP_BALBcJ_T0029941.1 MGP_BALBcJ_G0018479.1 mouse_genomes_project 11 67724910 67726986 - MGP_BALBcJ_P0029941 Atp1b2 protein_coding protein_coding MGP_BALBcJ_T0029942.1 MGP_BALBcJ_G0018479.1 mouse_genomes_project 11 67725602 67727858 - Atp1b2 protein_coding processed_transcript MGP_BALBcJ_T0029943.1 MGP_BALBcJ_G0018479.1 mouse_genomes_project 11 67726388 67727407 - Atp1b2 protein_coding processed_transcript MGP_BALBcJ_T0030746.1 MGP_BALBcJ_G0018674.1 mouse_genomes_project 11 74735556 74742696 + MGP_BALBcJ_P0030746 Timm22 protein_coding protein_coding MGP_BALBcJ_T0030747.1 MGP_BALBcJ_G0018674.1 mouse_genomes_project 11 74735747 74744659 + MGP_BALBcJ_P0030747 Timm22 protein_coding protein_coding MGP_BALBcJ_T0030748.1 MGP_BALBcJ_G0018674.1 mouse_genomes_project 11 74735795 74742449 + MGP_BALBcJ_P0030748 Timm22 protein_coding protein_coding MGP_BALBcJ_T0030749.1 MGP_BALBcJ_G0018674.1 mouse_genomes_project 11 74735809 74738297 + MGP_BALBcJ_P0030749 Timm22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030985.1 MGP_BALBcJ_G0018723.1 mouse_genomes_project 11 76877644 76879279 + MGP_BALBcJ_P0030985 Sebox protein_coding protein_coding MGP_BALBcJ_T0030986.1 MGP_BALBcJ_G0018723.1 mouse_genomes_project 11 76877696 76879272 + MGP_BALBcJ_P0030986 Sebox protein_coding protein_coding MGP_BALBcJ_T0031434.1 MGP_BALBcJ_G0018845.1 mouse_genomes_project 11 86146715 86149313 + MGP_BALBcJ_P0031434 Gm11492 protein_coding protein_coding MGP_BALBcJ_T0031627.1 MGP_BALBcJ_G0018891.1 mouse_genomes_project 11 92874195 92878336 + MGP_BALBcJ_P0031627 Tob1 protein_coding protein_coding MGP_BALBcJ_T0000838.1 MGP_BALBcJ_G0000770.1 mouse_genomes_project 11 16108883 16109739 - TEC TEC MGP_BALBcJ_T0099287.1 MGP_BALBcJ_G0037323.1 mouse_genomes_project 11 97263292 97263383 - Gm25048 snRNA snRNA MGP_BALBcJ_T0031165.1 MGP_BALBcJ_G0018773.1 mouse_genomes_project 11 81344881 81353994 + MGP_BALBcJ_P0031165 Fndc8 protein_coding protein_coding MGP_BALBcJ_T0003320.1 MGP_BALBcJ_G0003062.1 mouse_genomes_project 11 113366018 113367344 - 1700001J04Rik antisense antisense MGP_BALBcJ_T0003321.1 MGP_BALBcJ_G0003062.1 mouse_genomes_project 11 113366539 113367241 - 1700001J04Rik antisense antisense MGP_BALBcJ_T0006194.1 MGP_BALBcJ_G0005175.1 mouse_genomes_project 11 37372905 37710048 + lincRNA lincRNA MGP_BALBcJ_T0034124.1 MGP_BALBcJ_G0019469.1 mouse_genomes_project 11 119999804 120003449 - MGP_BALBcJ_P0034124 Cbr2 protein_coding protein_coding MGP_BALBcJ_T0034125.1 MGP_BALBcJ_G0019469.1 mouse_genomes_project 11 119999819 120001440 - Cbr2 protein_coding retained_intron MGP_BALBcJ_T0034126.1 MGP_BALBcJ_G0019469.1 mouse_genomes_project 11 120000037 120003307 - MGP_BALBcJ_P0034126 Cbr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0034127.1 MGP_BALBcJ_G0019469.1 mouse_genomes_project 11 120000094 120003279 - MGP_BALBcJ_P0034127 Cbr2 protein_coding protein_coding MGP_BALBcJ_T0034128.1 MGP_BALBcJ_G0019469.1 mouse_genomes_project 11 120001447 120003287 - Cbr2 protein_coding retained_intron MGP_BALBcJ_T0033935.1 MGP_BALBcJ_G0019433.1 mouse_genomes_project 11 119350516 119358717 - MGP_BALBcJ_P0033935 Enthd2 protein_coding protein_coding MGP_BALBcJ_T0033936.1 MGP_BALBcJ_G0019433.1 mouse_genomes_project 11 119350516 119358717 - MGP_BALBcJ_P0033936 Enthd2 protein_coding protein_coding MGP_BALBcJ_T0033937.1 MGP_BALBcJ_G0019433.1 mouse_genomes_project 11 119350516 119358717 - MGP_BALBcJ_P0033937 Enthd2 protein_coding protein_coding MGP_BALBcJ_T0033938.1 MGP_BALBcJ_G0019433.1 mouse_genomes_project 11 119354145 119357371 - Enthd2 protein_coding processed_transcript MGP_BALBcJ_T0033939.1 MGP_BALBcJ_G0019433.1 mouse_genomes_project 11 119355515 119357246 - Enthd2 protein_coding processed_transcript MGP_BALBcJ_T0033940.1 MGP_BALBcJ_G0019433.1 mouse_genomes_project 11 119356884 119358686 - Enthd2 protein_coding processed_transcript MGP_BALBcJ_T0028755.1 MGP_BALBcJ_G0018175.1 mouse_genomes_project 11 47344284 47357859 + Gfpt2 protein_coding retained_intron MGP_BALBcJ_T0028756.1 MGP_BALBcJ_G0018175.1 mouse_genomes_project 11 47344293 47388720 + MGP_BALBcJ_P0028756 Gfpt2 protein_coding protein_coding MGP_BALBcJ_T0102150.1 MGP_BALBcJ_G0039967.1 mouse_genomes_project 11 81772554 81778851 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098743.1 MGP_BALBcJ_G0036797.1 mouse_genomes_project 11 116296687 116296880 + Gm26083 scaRNA scaRNA MGP_BALBcJ_T0006184.1 MGP_BALBcJ_G0005165.1 mouse_genomes_project 11 29066917 29072488 + Gm12107 lincRNA lincRNA MGP_BALBcJ_T0100518.1 MGP_BALBcJ_G0038554.1 mouse_genomes_project 11 67793572 67793715 - Gm24029 snoRNA snoRNA MGP_BALBcJ_T0100495.1 MGP_BALBcJ_G0038531.1 mouse_genomes_project 11 22302000 22302128 - Gm24255 snoRNA snoRNA MGP_BALBcJ_T0012462.1 MGP_BALBcJ_G0010559.1 mouse_genomes_project 11 11589638 11590187 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032780.1 MGP_BALBcJ_G0019194.1 mouse_genomes_project 11 102016359 102038568 - MGP_BALBcJ_P0032780 Dcakd protein_coding protein_coding MGP_BALBcJ_T0032781.1 MGP_BALBcJ_G0019194.1 mouse_genomes_project 11 102016361 102019861 - Dcakd protein_coding retained_intron MGP_BALBcJ_T0032782.1 MGP_BALBcJ_G0019194.1 mouse_genomes_project 11 102021960 102049527 - MGP_BALBcJ_P0032782 Dcakd protein_coding protein_coding MGP_BALBcJ_T0032783.1 MGP_BALBcJ_G0019194.1 mouse_genomes_project 11 102048210 102049486 - Dcakd protein_coding retained_intron MGP_BALBcJ_T0032784.1 MGP_BALBcJ_G0019194.1 mouse_genomes_project 11 102048484 102049556 - Dcakd protein_coding processed_transcript MGP_BALBcJ_T0028724.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46707167 46725720 + MGP_BALBcJ_P0028724 Mgat1 protein_coding protein_coding MGP_BALBcJ_T0028725.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46707222 46725725 + MGP_BALBcJ_P0028725 Mgat1 protein_coding protein_coding MGP_BALBcJ_T0028726.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46707385 46708437 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028727.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46707543 46708394 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028728.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46708207 46723389 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028729.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46710453 46725693 + MGP_BALBcJ_P0028729 Mgat1 protein_coding protein_coding MGP_BALBcJ_T0028730.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46710459 46723520 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028731.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46711933 46714614 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028732.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46713488 46725728 + MGP_BALBcJ_P0028732 Mgat1 protein_coding protein_coding MGP_BALBcJ_T0028733.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46713541 46720949 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028734.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46713548 46723389 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0028735.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46713566 46723989 + MGP_BALBcJ_P0028735 Mgat1 protein_coding protein_coding MGP_BALBcJ_T0028736.1 MGP_BALBcJ_G0018162.1 mouse_genomes_project 11 46719220 46720811 + Mgat1 protein_coding processed_transcript MGP_BALBcJ_T0033967.1 MGP_BALBcJ_G0019438.1 mouse_genomes_project 11 119608283 119610796 + MGP_BALBcJ_P0033967 0610009L18Rik protein_coding protein_coding MGP_BALBcJ_T0029151.1 MGP_BALBcJ_G0018276.1 mouse_genomes_project 11 55296086 55330467 - MGP_BALBcJ_P0029151 Fam114a2 protein_coding protein_coding MGP_BALBcJ_T0029152.1 MGP_BALBcJ_G0018276.1 mouse_genomes_project 11 55296312 55330456 - MGP_BALBcJ_P0029152 Fam114a2 protein_coding unknown_likely_coding MGP_BALBcJ_T0029153.1 MGP_BALBcJ_G0018276.1 mouse_genomes_project 11 55317225 55319255 - Fam114a2 protein_coding processed_transcript MGP_BALBcJ_T0029154.1 MGP_BALBcJ_G0018276.1 mouse_genomes_project 11 55319201 55330466 - Fam114a2 protein_coding processed_transcript MGP_BALBcJ_T0098454.1 MGP_BALBcJ_G0036508.1 mouse_genomes_project 11 20124467 20124567 - Gm23740 rRNA rRNA MGP_BALBcJ_T0099276.1 MGP_BALBcJ_G0037312.1 mouse_genomes_project 11 85884340 85884446 - Gm22883 snRNA snRNA MGP_BALBcJ_T0031226.1 MGP_BALBcJ_G0018793.1 mouse_genomes_project 11 82100931 82106649 - MGP_BALBcJ_P0031226 Ccl9 protein_coding protein_coding MGP_BALBcJ_T0031227.1 MGP_BALBcJ_G0018793.1 mouse_genomes_project 11 82103330 82105155 - Ccl9 protein_coding processed_transcript MGP_BALBcJ_T0029614.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666174 60682635 + MGP_BALBcJ_P0029614 Mmgt2 protein_coding protein_coding MGP_BALBcJ_T0029615.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666323 60680536 + Mmgt2 protein_coding retained_intron MGP_BALBcJ_T0029616.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666327 60682565 + Mmgt2 protein_coding processed_transcript MGP_BALBcJ_T0029617.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666330 60682497 + Mmgt2 protein_coding processed_transcript MGP_BALBcJ_T0029618.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666341 60682705 + MGP_BALBcJ_P0029618 Mmgt2 protein_coding protein_coding MGP_BALBcJ_T0029619.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666345 60683012 + MGP_BALBcJ_P0029619 Mmgt2 protein_coding protein_coding MGP_BALBcJ_T0029620.1 MGP_BALBcJ_G0018399.1 mouse_genomes_project 11 60666959 60684130 + MGP_BALBcJ_P0029620 Mmgt2 protein_coding protein_coding MGP_BALBcJ_T0028001.1 MGP_BALBcJ_G0017979.1 mouse_genomes_project 11 5984644 6007968 - MGP_BALBcJ_P0028001 Sun3 protein_coding protein_coding MGP_BALBcJ_T0028002.1 MGP_BALBcJ_G0017979.1 mouse_genomes_project 11 5984644 6016356 - MGP_BALBcJ_P0028002 Sun3 protein_coding protein_coding MGP_BALBcJ_T0012632.1 MGP_BALBcJ_G0010729.1 mouse_genomes_project 11 68513511 68514155 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030019.1 MGP_BALBcJ_G0018499.1 mouse_genomes_project 11 67971202 67982926 - MGP_BALBcJ_P0030019 Nlgn2 protein_coding protein_coding MGP_BALBcJ_T0030020.1 MGP_BALBcJ_G0018499.1 mouse_genomes_project 11 67971202 67986192 - MGP_BALBcJ_P0030020 Nlgn2 protein_coding protein_coding MGP_BALBcJ_T0030021.1 MGP_BALBcJ_G0018499.1 mouse_genomes_project 11 67975816 67982336 - MGP_BALBcJ_P0030021 Nlgn2 protein_coding protein_coding MGP_BALBcJ_T0030022.1 MGP_BALBcJ_G0018499.1 mouse_genomes_project 11 67976121 67976637 - Nlgn2 protein_coding retained_intron MGP_BALBcJ_T0003307.1 MGP_BALBcJ_G0003052.1 mouse_genomes_project 11 106474085 106477246 + Gm11713 antisense antisense MGP_BALBcJ_T0006165.1 MGP_BALBcJ_G0005152.1 mouse_genomes_project 11 21282282 21286412 - Gm12065 lincRNA lincRNA MGP_BALBcJ_T0032223.1 MGP_BALBcJ_G0019063.1 mouse_genomes_project 11 98753987 98755252 - MGP_BALBcJ_P0032223 2300003K06Rik protein_coding protein_coding MGP_BALBcJ_T0031628.1 MGP_BALBcJ_G0018892.1 mouse_genomes_project 11 92899565 92906046 - MGP_BALBcJ_P0031628 Wfikkn2 protein_coding protein_coding MGP_BALBcJ_T0031629.1 MGP_BALBcJ_G0018892.1 mouse_genomes_project 11 92905785 92910406 - Wfikkn2 protein_coding processed_transcript MGP_BALBcJ_T0030221.1 MGP_BALBcJ_G0018541.1 mouse_genomes_project 11 68686730 68687787 + Psmb6 protein_coding retained_intron MGP_BALBcJ_T0030222.1 MGP_BALBcJ_G0018541.1 mouse_genomes_project 11 68686749 68689012 + MGP_BALBcJ_P0030222 Psmb6 protein_coding protein_coding MGP_BALBcJ_T0030223.1 MGP_BALBcJ_G0018541.1 mouse_genomes_project 11 68687472 68688556 + Psmb6 protein_coding retained_intron MGP_BALBcJ_T0030224.1 MGP_BALBcJ_G0018541.1 mouse_genomes_project 11 68688434 68689221 + Psmb6 protein_coding retained_intron MGP_BALBcJ_T0027665.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 408068 429793 - Smtn protein_coding processed_transcript MGP_BALBcJ_T0027666.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 408068 429780 - MGP_BALBcJ_P0027666 Smtn protein_coding protein_coding MGP_BALBcJ_T0027667.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 408068 429833 - MGP_BALBcJ_P0027667 Smtn protein_coding protein_coding MGP_BALBcJ_T0027668.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 408068 429833 - MGP_BALBcJ_P0027668 Smtn protein_coding protein_coding MGP_BALBcJ_T0027669.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 408068 418482 - MGP_BALBcJ_P0027669 Smtn protein_coding protein_coding MGP_BALBcJ_T0027670.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 408068 427943 - MGP_BALBcJ_P0027670 Smtn protein_coding protein_coding MGP_BALBcJ_T0027671.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 411083 413099 - Smtn protein_coding processed_transcript MGP_BALBcJ_T0027672.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 423004 431153 - MGP_BALBcJ_P0027672 Smtn protein_coding protein_coding MGP_BALBcJ_T0027673.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 423147 429792 - MGP_BALBcJ_P0027673 Smtn protein_coding protein_coding MGP_BALBcJ_T0027674.1 MGP_BALBcJ_G0017902.1 mouse_genomes_project 11 425358 429790 - Smtn protein_coding processed_transcript MGP_BALBcJ_T0028429.1 MGP_BALBcJ_G0018074.1 mouse_genomes_project 11 29534486 29549399 + protein_coding retained_intron MGP_BALBcJ_T0028430.1 MGP_BALBcJ_G0018074.1 mouse_genomes_project 11 29548785 29549398 + MGP_BALBcJ_P0028430 protein_coding protein_coding MGP_BALBcJ_T0006262.1 MGP_BALBcJ_G0005231.1 mouse_genomes_project 11 78424460 78429635 - Gm26563 lincRNA lincRNA MGP_BALBcJ_T0006263.1 MGP_BALBcJ_G0005231.1 mouse_genomes_project 11 78425586 78437825 - Gm26563 lincRNA lincRNA MGP_BALBcJ_T0006244.1 MGP_BALBcJ_G0005218.1 mouse_genomes_project 11 69826034 69837432 - Gm12324 lincRNA lincRNA MGP_BALBcJ_T0032957.1 MGP_BALBcJ_G0019232.1 mouse_genomes_project 11 105033529 105054527 + MGP_BALBcJ_P0032957 Kcnh6 protein_coding protein_coding MGP_BALBcJ_T0032958.1 MGP_BALBcJ_G0019232.1 mouse_genomes_project 11 105033578 105054969 + MGP_BALBcJ_P0032958 Kcnh6 protein_coding protein_coding MGP_BALBcJ_T0032959.1 MGP_BALBcJ_G0019232.1 mouse_genomes_project 11 105033608 105054484 + MGP_BALBcJ_P0032959 Kcnh6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032960.1 MGP_BALBcJ_G0019232.1 mouse_genomes_project 11 105039179 105042880 + Kcnh6 protein_coding processed_transcript MGP_BALBcJ_T0006155.1 MGP_BALBcJ_G0005142.1 mouse_genomes_project 11 17177569 17178348 - Gm12031 lincRNA lincRNA MGP_BALBcJ_T0030875.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76331777 76375868 + MGP_BALBcJ_P0030875 Phf12 protein_coding protein_coding MGP_BALBcJ_T0030876.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76331825 76380193 + MGP_BALBcJ_P0030876 Phf12 protein_coding protein_coding MGP_BALBcJ_T0030877.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76372837 76375846 + MGP_BALBcJ_P0030877 Phf12 protein_coding protein_coding MGP_BALBcJ_T0030878.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76373051 76375615 + Phf12 protein_coding retained_intron MGP_BALBcJ_T0030879.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76373085 76375836 + MGP_BALBcJ_P0030879 Phf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030880.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76373152 76378501 + MGP_BALBcJ_P0030880 Phf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030881.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76373175 76375670 + MGP_BALBcJ_P0030881 Phf12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030882.1 MGP_BALBcJ_G0018699.1 mouse_genomes_project 11 76377763 76379231 + Phf12 protein_coding retained_intron MGP_BALBcJ_T0028696.1 MGP_BALBcJ_G0018155.1 mouse_genomes_project 11 46532307 46552847 + MGP_BALBcJ_P0028696 Ifi47 protein_coding protein_coding MGP_BALBcJ_T0028697.1 MGP_BALBcJ_G0018155.1 mouse_genomes_project 11 46542515 46551309 + Ifi47 protein_coding processed_transcript MGP_BALBcJ_T0028699.1 MGP_BALBcJ_G0018155.1 mouse_genomes_project 11 46542854 46552845 + MGP_BALBcJ_P0028699 Ifi47 protein_coding protein_coding MGP_BALBcJ_T0003276.1 MGP_BALBcJ_G0003023.1 mouse_genomes_project 11 99202031 99214599 - Gm14206 antisense antisense MGP_BALBcJ_T0029886.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67417297 67418301 - Cntrob protein_coding retained_intron MGP_BALBcJ_T0029887.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67417297 67441584 - MGP_BALBcJ_P0029887 Cntrob protein_coding protein_coding MGP_BALBcJ_T0029888.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67417297 67441584 - MGP_BALBcJ_P0029888 Cntrob protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029889.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67417350 67437277 - MGP_BALBcJ_P0029889 Cntrob protein_coding protein_coding MGP_BALBcJ_T0029890.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67417511 67420965 - MGP_BALBcJ_P0029890 Cntrob protein_coding protein_coding MGP_BALBcJ_T0029891.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67419327 67422788 - Cntrob protein_coding retained_intron MGP_BALBcJ_T0029892.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67426222 67427251 - MGP_BALBcJ_P0029892 Cntrob protein_coding protein_coding MGP_BALBcJ_T0029893.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67427852 67432947 - Cntrob protein_coding retained_intron MGP_BALBcJ_T0029894.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67432585 67437882 - Cntrob protein_coding retained_intron MGP_BALBcJ_T0029895.1 MGP_BALBcJ_G0018465.1 mouse_genomes_project 11 67433001 67437295 - Cntrob protein_coding retained_intron MGP_BALBcJ_T0003201.1 MGP_BALBcJ_G0002967.1 mouse_genomes_project 11 67522058 67523247 + Kdm6bos antisense antisense MGP_BALBcJ_T0030981.1 MGP_BALBcJ_G0018722.1 mouse_genomes_project 11 76873283 76874778 + Vtn protein_coding retained_intron MGP_BALBcJ_T0030982.1 MGP_BALBcJ_G0018722.1 mouse_genomes_project 11 76873312 76876517 + MGP_BALBcJ_P0030982 Vtn protein_coding protein_coding MGP_BALBcJ_T0030983.1 MGP_BALBcJ_G0018722.1 mouse_genomes_project 11 76873364 76874437 + Vtn protein_coding retained_intron MGP_BALBcJ_T0030984.1 MGP_BALBcJ_G0018722.1 mouse_genomes_project 11 76874798 76876415 + Vtn protein_coding retained_intron MGP_BALBcJ_T0100546.1 MGP_BALBcJ_G0038582.1 mouse_genomes_project 11 105537027 105537162 + Gm22711 snoRNA snoRNA MGP_BALBcJ_T0003210.1 MGP_BALBcJ_G0002974.1 mouse_genomes_project 11 75330816 75331776 - Gm12343 antisense antisense MGP_BALBcJ_T0031502.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86670029 86676407 + MGP_BALBcJ_P0031502 Srsf1 protein_coding protein_coding MGP_BALBcJ_T0031503.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86670375 86674148 + MGP_BALBcJ_P0031503 Srsf1 protein_coding protein_coding MGP_BALBcJ_T0031504.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86670382 86671486 + Srsf1 protein_coding retained_intron MGP_BALBcJ_T0031505.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86670462 86673069 + MGP_BALBcJ_P0031505 Srsf1 protein_coding protein_coding MGP_BALBcJ_T0031506.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86671226 86674130 + MGP_BALBcJ_P0031506 Srsf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031507.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86671248 86673781 + MGP_BALBcJ_P0031507 Srsf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031508.1 MGP_BALBcJ_G0018860.1 mouse_genomes_project 11 86672071 86673710 + Srsf1 protein_coding retained_intron MGP_BALBcJ_T0009705.1 MGP_BALBcJ_G0007830.1 mouse_genomes_project 11 86343536 86343651 - Mir142b miRNA miRNA MGP_BALBcJ_T0017152.1 MGP_BALBcJ_G0015109.1 mouse_genomes_project 11 56876454 56888728 - 2310058D17Rik processed_transcript processed_transcript MGP_BALBcJ_T0012672.1 MGP_BALBcJ_G0010769.1 mouse_genomes_project 11 81174010 81175113 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032220.1 MGP_BALBcJ_G0019060.1 mouse_genomes_project 11 98733822 98734736 - MGP_BALBcJ_P0032220 protein_coding protein_coding MGP_BALBcJ_T0032700.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101440795 101447841 + MGP_BALBcJ_P0032700 Grn protein_coding protein_coding MGP_BALBcJ_T0032701.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101440998 101445476 + MGP_BALBcJ_P0032701 Grn protein_coding protein_coding MGP_BALBcJ_T0032702.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101443814 101445287 + Grn protein_coding retained_intron MGP_BALBcJ_T0032703.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101444961 101445625 + Grn protein_coding retained_intron MGP_BALBcJ_T0032704.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101445128 101446294 + Grn protein_coding retained_intron MGP_BALBcJ_T0032705.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101445131 101445923 + Grn protein_coding retained_intron MGP_BALBcJ_T0032706.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101445749 101446976 + Grn protein_coding retained_intron MGP_BALBcJ_T0032707.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101446316 101447605 + MGP_BALBcJ_P0032707 Grn protein_coding protein_coding MGP_BALBcJ_T0032708.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101446337 101447096 + Grn protein_coding retained_intron MGP_BALBcJ_T0032709.1 MGP_BALBcJ_G0019177.1 mouse_genomes_project 11 101446447 101448057 + MGP_BALBcJ_P0032709 Grn protein_coding protein_coding MGP_BALBcJ_T0033105.1 MGP_BALBcJ_G0019265.1 mouse_genomes_project 11 106805045 106871944 - MGP_BALBcJ_P0033105 Cacng4 protein_coding protein_coding MGP_BALBcJ_T0033106.1 MGP_BALBcJ_G0019265.1 mouse_genomes_project 11 106807885 106814687 - Cacng4 protein_coding processed_transcript MGP_BALBcJ_T0029830.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67128290 67137502 + Ctc1 protein_coding retained_intron MGP_BALBcJ_T0029831.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67128450 67148808 + MGP_BALBcJ_P0029831 Ctc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029832.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67128461 67148805 + MGP_BALBcJ_P0029832 Ctc1 protein_coding protein_coding MGP_BALBcJ_T0029833.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67128465 67148810 + MGP_BALBcJ_P0029833 Ctc1 protein_coding protein_coding MGP_BALBcJ_T0029834.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67128498 67135106 + Ctc1 protein_coding processed_transcript MGP_BALBcJ_T0029835.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67140019 67141544 + Ctc1 protein_coding retained_intron MGP_BALBcJ_T0029836.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67141405 67143901 + Ctc1 protein_coding processed_transcript MGP_BALBcJ_T0029837.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67143581 67147283 + Ctc1 protein_coding processed_transcript MGP_BALBcJ_T0029838.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67146209 67148156 + Ctc1 protein_coding retained_intron MGP_BALBcJ_T0029839.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67146855 67148141 + Ctc1 protein_coding retained_intron MGP_BALBcJ_T0029840.1 MGP_BALBcJ_G0018453.1 mouse_genomes_project 11 67147213 67148515 + Ctc1 protein_coding retained_intron MGP_BALBcJ_T0006326.1 MGP_BALBcJ_G0005277.1 mouse_genomes_project 11 112200182 112328286 - 2610035D17Rik lincRNA lincRNA MGP_BALBcJ_T0006327.1 MGP_BALBcJ_G0005277.1 mouse_genomes_project 11 112200182 112358464 - 2610035D17Rik lincRNA lincRNA MGP_BALBcJ_T0006328.1 MGP_BALBcJ_G0005277.1 mouse_genomes_project 11 112200182 112358448 - 2610035D17Rik lincRNA lincRNA MGP_BALBcJ_T0006329.1 MGP_BALBcJ_G0005277.1 mouse_genomes_project 11 112200804 112328286 - 2610035D17Rik lincRNA lincRNA MGP_BALBcJ_T0003115.1 MGP_BALBcJ_G0002892.1 mouse_genomes_project 11 20970839 20971768 + Gm12061 antisense antisense MGP_BALBcJ_T0012449.1 MGP_BALBcJ_G0010546.1 mouse_genomes_project 11 3763749 3764494 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100537.1 MGP_BALBcJ_G0038573.1 mouse_genomes_project 11 91563914 91564057 + Gm25113 snoRNA snoRNA MGP_BALBcJ_T0012727.1 MGP_BALBcJ_G0010824.1 mouse_genomes_project 11 101750074 101751107 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003149.1 MGP_BALBcJ_G0002924.1 mouse_genomes_project 11 52147816 52161172 - Gm12224 antisense antisense MGP_BALBcJ_T0003150.1 MGP_BALBcJ_G0002924.1 mouse_genomes_project 11 52152079 52161123 - Gm12224 antisense antisense MGP_BALBcJ_T0028574.1 MGP_BALBcJ_G0018117.1 mouse_genomes_project 11 40931002 40936488 - MGP_BALBcJ_P0028574 Fabp6 protein_coding protein_coding MGP_BALBcJ_T0029539.1 MGP_BALBcJ_G0018387.1 mouse_genomes_project 11 59779409 59859268 - MGP_BALBcJ_P0029539 Ulk2 protein_coding protein_coding MGP_BALBcJ_T0029540.1 MGP_BALBcJ_G0018387.1 mouse_genomes_project 11 59781262 59858697 - Ulk2 protein_coding processed_transcript MGP_BALBcJ_T0029541.1 MGP_BALBcJ_G0018387.1 mouse_genomes_project 11 59803594 59807714 - Ulk2 protein_coding processed_transcript MGP_BALBcJ_T0006249.1 MGP_BALBcJ_G0005222.1 mouse_genomes_project 11 71218982 71221933 - 4732414G09Rik lincRNA lincRNA MGP_BALBcJ_T0006250.1 MGP_BALBcJ_G0005222.1 mouse_genomes_project 11 71218982 71221970 - 4732414G09Rik lincRNA lincRNA MGP_BALBcJ_T0012457.1 MGP_BALBcJ_G0010554.1 mouse_genomes_project 11 8306145 8306975 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027890.1 MGP_BALBcJ_G0017953.1 mouse_genomes_project 11 2863090 2877464 - MGP_BALBcJ_P0027890 Gck protein_coding protein_coding MGP_BALBcJ_T0027891.1 MGP_BALBcJ_G0017953.1 mouse_genomes_project 11 2863090 2877464 - MGP_BALBcJ_P0027891 Gck protein_coding protein_coding MGP_BALBcJ_T0027892.1 MGP_BALBcJ_G0017953.1 mouse_genomes_project 11 2863093 2910994 - MGP_BALBcJ_P0027892 Gck protein_coding protein_coding MGP_BALBcJ_T0027893.1 MGP_BALBcJ_G0017953.1 mouse_genomes_project 11 2863839 2864358 - MGP_BALBcJ_P0027893 Gck protein_coding protein_coding MGP_BALBcJ_T0003331.1 MGP_BALBcJ_G0003071.1 mouse_genomes_project 11 117026085 117027815 - Gm11723 antisense antisense MGP_BALBcJ_T0029659.1 MGP_BALBcJ_G0018412.1 mouse_genomes_project 11 62458084 62542896 + MGP_BALBcJ_P0029659 Hs3st3a1 protein_coding protein_coding MGP_BALBcJ_T0029061.1 MGP_BALBcJ_G0018252.1 mouse_genomes_project 11 52051319 52053716 - MGP_BALBcJ_P0029061 Csf2 protein_coding protein_coding MGP_BALBcJ_T0030957.1 MGP_BALBcJ_G0018715.1 mouse_genomes_project 11 76694916 76699726 + MGP_BALBcJ_P0030957 Aldoc protein_coding protein_coding MGP_BALBcJ_T0030958.1 MGP_BALBcJ_G0018715.1 mouse_genomes_project 11 76695116 76696642 + Aldoc protein_coding retained_intron MGP_BALBcJ_T0030959.1 MGP_BALBcJ_G0018715.1 mouse_genomes_project 11 76696144 76698705 + MGP_BALBcJ_P0030959 Aldoc protein_coding protein_coding MGP_BALBcJ_T0030960.1 MGP_BALBcJ_G0018715.1 mouse_genomes_project 11 76696270 76698063 + Aldoc protein_coding processed_transcript MGP_BALBcJ_T0030961.1 MGP_BALBcJ_G0018715.1 mouse_genomes_project 11 76697009 76697506 + Aldoc protein_coding processed_transcript MGP_BALBcJ_T0030962.1 MGP_BALBcJ_G0018715.1 mouse_genomes_project 11 76697273 76698653 + Aldoc protein_coding processed_transcript MGP_BALBcJ_T0102158.1 MGP_BALBcJ_G0039975.1 mouse_genomes_project 11 93529086 93529765 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0028575.1 MGP_BALBcJ_G0018118.1 mouse_genomes_project 11 41015294 41044733 + MGP_BALBcJ_P0028575 Pwwp2a protein_coding protein_coding MGP_BALBcJ_T0028576.1 MGP_BALBcJ_G0018118.1 mouse_genomes_project 11 41015354 41057906 + MGP_BALBcJ_P0028576 Pwwp2a protein_coding protein_coding MGP_BALBcJ_T0028577.1 MGP_BALBcJ_G0018118.1 mouse_genomes_project 11 41015844 41021556 + Pwwp2a protein_coding processed_transcript MGP_BALBcJ_T0028578.1 MGP_BALBcJ_G0018118.1 mouse_genomes_project 11 41021646 41044733 + MGP_BALBcJ_P0028578 Pwwp2a protein_coding protein_coding MGP_BALBcJ_T0028579.1 MGP_BALBcJ_G0018118.1 mouse_genomes_project 11 41042931 41058986 + Pwwp2a protein_coding processed_transcript MGP_BALBcJ_T0028580.1 MGP_BALBcJ_G0018118.1 mouse_genomes_project 11 41055154 41058327 + Pwwp2a protein_coding processed_transcript MGP_BALBcJ_T0032098.1 MGP_BALBcJ_G0019010.1 mouse_genomes_project 11 97533565 97546521 + MGP_BALBcJ_P0032098 Psmd3 protein_coding protein_coding MGP_BALBcJ_T0032099.1 MGP_BALBcJ_G0019010.1 mouse_genomes_project 11 97533576 97543055 + Psmd3 protein_coding retained_intron MGP_BALBcJ_T0032100.1 MGP_BALBcJ_G0019010.1 mouse_genomes_project 11 97533602 97545591 + Psmd3 protein_coding retained_intron MGP_BALBcJ_T0032101.1 MGP_BALBcJ_G0019010.1 mouse_genomes_project 11 97538798 97544382 + MGP_BALBcJ_P0032101 Psmd3 protein_coding protein_coding MGP_BALBcJ_T0032102.1 MGP_BALBcJ_G0019010.1 mouse_genomes_project 11 97540998 97542007 + Psmd3 protein_coding retained_intron MGP_BALBcJ_T0006289.1 MGP_BALBcJ_G0005249.1 mouse_genomes_project 11 88796940 88805655 - Gm11494 lincRNA lincRNA MGP_BALBcJ_T0098452.1 MGP_BALBcJ_G0036506.1 mouse_genomes_project 11 3236212 3236326 + n-R5s67 rRNA rRNA MGP_BALBcJ_T0029415.1 MGP_BALBcJ_G0018363.1 mouse_genomes_project 11 58708358 58712912 + MGP_BALBcJ_P0029415 Mief2 protein_coding protein_coding MGP_BALBcJ_T0029416.1 MGP_BALBcJ_G0018363.1 mouse_genomes_project 11 58708403 58710957 + Mief2 protein_coding retained_intron MGP_BALBcJ_T0029417.1 MGP_BALBcJ_G0018363.1 mouse_genomes_project 11 58708405 58710624 + Mief2 protein_coding processed_transcript MGP_BALBcJ_T0028983.1 MGP_BALBcJ_G0018233.1 mouse_genomes_project 11 51213427 51215940 - MGP_BALBcJ_P0028983 Gm10447 protein_coding protein_coding MGP_BALBcJ_T0033416.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114818214 114839010 - MGP_BALBcJ_P0033416 Gga3 protein_coding protein_coding MGP_BALBcJ_T0033417.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114818214 114839010 - MGP_BALBcJ_P0033417 Gga3 protein_coding protein_coding MGP_BALBcJ_T0033418.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114818214 114839010 - MGP_BALBcJ_P0033418 Gga3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033419.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114818323 114823531 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033420.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114819663 114823015 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033421.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114819746 114838843 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033422.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114821544 114821987 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033423.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114821895 114838835 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033424.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114822436 114838847 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033425.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114825651 114838852 - MGP_BALBcJ_P0033425 Gga3 protein_coding protein_coding MGP_BALBcJ_T0033426.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114826508 114838683 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0033427.1 MGP_BALBcJ_G0019337.1 mouse_genomes_project 11 114826526 114838839 - Gga3 protein_coding processed_transcript MGP_BALBcJ_T0017206.1 MGP_BALBcJ_G0015136.1 mouse_genomes_project 11 95816513 95823169 - Gm11532 processed_transcript processed_transcript MGP_BALBcJ_T0003124.1 MGP_BALBcJ_G0002900.1 mouse_genomes_project 11 31582033 31590441 + 4930403D09Rik antisense antisense MGP_BALBcJ_T0006235.1 MGP_BALBcJ_G0005211.1 mouse_genomes_project 11 65153224 65160893 - 2310065F04Rik lincRNA lincRNA MGP_BALBcJ_T0006236.1 MGP_BALBcJ_G0005211.1 mouse_genomes_project 11 65154767 65157602 - 2310065F04Rik lincRNA lincRNA MGP_BALBcJ_T0009737.1 MGP_BALBcJ_G0007862.1 mouse_genomes_project 11 106709485 106709543 + Mir6932 miRNA miRNA MGP_BALBcJ_T0003179.1 MGP_BALBcJ_G0002949.1 mouse_genomes_project 11 60652237 60656322 + Lrrc75aos1 antisense antisense MGP_BALBcJ_T0029242.1 MGP_BALBcJ_G0018318.1 mouse_genomes_project 11 56753044 56768697 + MGP_BALBcJ_P0029242 Gm12258 protein_coding protein_coding MGP_BALBcJ_T0029243.1 MGP_BALBcJ_G0018318.1 mouse_genomes_project 11 56753065 56757261 + Gm12258 protein_coding processed_transcript MGP_BALBcJ_T0033096.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106620071 106650494 + Helz protein_coding processed_transcript MGP_BALBcJ_T0033097.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106620097 106744277 + MGP_BALBcJ_P0033097 Helz protein_coding protein_coding MGP_BALBcJ_T0033098.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106620101 106759598 + MGP_BALBcJ_P0033098 Helz protein_coding protein_coding MGP_BALBcJ_T0033099.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106620109 106766478 + MGP_BALBcJ_P0033099 Helz protein_coding protein_coding MGP_BALBcJ_T0033100.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106699058 106744277 + MGP_BALBcJ_P0033100 Helz protein_coding protein_coding MGP_BALBcJ_T0033101.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106706272 106717858 + Helz protein_coding processed_transcript MGP_BALBcJ_T0033102.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106743041 106744975 + Helz protein_coding processed_transcript MGP_BALBcJ_T0033103.1 MGP_BALBcJ_G0019263.1 mouse_genomes_project 11 106744940 106759168 + Helz protein_coding processed_transcript MGP_BALBcJ_T0032295.1 MGP_BALBcJ_G0019098.1 mouse_genomes_project 11 99370039 99386284 + MGP_BALBcJ_P0032295 Klhl10 protein_coding protein_coding MGP_BALBcJ_T0032296.1 MGP_BALBcJ_G0019098.1 mouse_genomes_project 11 99370049 99374144 + MGP_BALBcJ_P0032296 Klhl10 protein_coding protein_coding MGP_BALBcJ_T0032092.1 MGP_BALBcJ_G0019008.1 mouse_genomes_project 11 97491102 97506072 + MGP_BALBcJ_P0032092 Gsdma2 protein_coding protein_coding MGP_BALBcJ_T0032093.1 MGP_BALBcJ_G0019008.1 mouse_genomes_project 11 97491106 97496490 + Gsdma2 protein_coding processed_transcript MGP_BALBcJ_T0032094.1 MGP_BALBcJ_G0019008.1 mouse_genomes_project 11 97491112 97495451 + Gsdma2 protein_coding processed_transcript MGP_BALBcJ_T0032095.1 MGP_BALBcJ_G0019008.1 mouse_genomes_project 11 97491118 97496062 + Gsdma2 protein_coding processed_transcript MGP_BALBcJ_T0032096.1 MGP_BALBcJ_G0019008.1 mouse_genomes_project 11 97497026 97497374 + Gsdma2 protein_coding processed_transcript MGP_BALBcJ_T0012662.1 MGP_BALBcJ_G0010759.1 mouse_genomes_project 11 77087641 77088665 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027656.1 MGP_BALBcJ_G0017900.1 mouse_genomes_project 11 383779 394155 - MGP_BALBcJ_P0027656 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027657.1 MGP_BALBcJ_G0017900.1 mouse_genomes_project 11 383779 394158 - MGP_BALBcJ_P0027657 protein_coding non_stop_decay MGP_BALBcJ_T0027658.1 MGP_BALBcJ_G0017900.1 mouse_genomes_project 11 383779 391518 - MGP_BALBcJ_P0027658 protein_coding protein_coding MGP_BALBcJ_T0027659.1 MGP_BALBcJ_G0017900.1 mouse_genomes_project 11 383944 394170 - MGP_BALBcJ_P0027659 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027660.1 MGP_BALBcJ_G0017900.1 mouse_genomes_project 11 384057 394739 - MGP_BALBcJ_P0027660 protein_coding unknown_likely_coding MGP_BALBcJ_T0027661.1 MGP_BALBcJ_G0017900.1 mouse_genomes_project 11 388335 394183 - MGP_BALBcJ_P0027661 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012652.1 MGP_BALBcJ_G0010749.1 mouse_genomes_project 11 75429638 75429942 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028962.1 MGP_BALBcJ_G0018227.1 mouse_genomes_project 11 51011635 51052642 - MGP_BALBcJ_P0028962 Hspa4 protein_coding protein_coding MGP_BALBcJ_T0028963.1 MGP_BALBcJ_G0018227.1 mouse_genomes_project 11 51014646 51019618 - Hspa4 protein_coding retained_intron MGP_BALBcJ_T0028964.1 MGP_BALBcJ_G0018227.1 mouse_genomes_project 11 51016623 51052596 - Hspa4 protein_coding processed_transcript MGP_BALBcJ_T0032257.1 MGP_BALBcJ_G0019089.1 mouse_genomes_project 11 99179474 99184287 - MGP_BALBcJ_P0032257 Krt17 protein_coding protein_coding MGP_BALBcJ_T0012623.1 MGP_BALBcJ_G0010720.1 mouse_genomes_project 11 64596461 64597440 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032239.1 MGP_BALBcJ_G0019079.1 mouse_genomes_project 11 98969584 98973445 - MGP_BALBcJ_P0032239 protein_coding protein_coding MGP_BALBcJ_T0030710.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74355509 74501325 - MGP_BALBcJ_P0030710 Vps53 protein_coding protein_coding MGP_BALBcJ_T0030711.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74355579 74501302 - MGP_BALBcJ_P0030711 Vps53 protein_coding protein_coding MGP_BALBcJ_T0030712.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74355580 74501295 - MGP_BALBcJ_P0030712 Vps53 protein_coding protein_coding MGP_BALBcJ_T0030713.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74371274 74401900 - Vps53 protein_coding retained_intron MGP_BALBcJ_T0030714.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74372213 74501177 - MGP_BALBcJ_P0030714 Vps53 protein_coding protein_coding MGP_BALBcJ_T0030715.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74372218 74501194 - MGP_BALBcJ_P0030715 Vps53 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030716.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74372218 74501177 - MGP_BALBcJ_P0030716 Vps53 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030717.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74426112 74501210 - MGP_BALBcJ_P0030717 Vps53 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030718.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74426727 74487933 - MGP_BALBcJ_P0030718 Vps53 protein_coding protein_coding MGP_BALBcJ_T0030720.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74430496 74501265 - Vps53 protein_coding retained_intron MGP_BALBcJ_T0030721.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74430612 74497468 - Vps53 protein_coding processed_transcript MGP_BALBcJ_T0030722.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74430617 74447521 - Vps53 protein_coding processed_transcript MGP_BALBcJ_T0030723.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74443230 74476360 - Vps53 protein_coding processed_transcript MGP_BALBcJ_T0030724.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74445006 74501312 - MGP_BALBcJ_P0030724 Vps53 protein_coding protein_coding MGP_BALBcJ_T0030725.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74492242 74501290 - Vps53 protein_coding processed_transcript MGP_BALBcJ_T0030726.1 MGP_BALBcJ_G0018667.1 mouse_genomes_project 11 74498638 74501316 - MGP_BALBcJ_P0030726 Vps53 protein_coding protein_coding MGP_BALBcJ_T0012615.1 MGP_BALBcJ_G0010712.1 mouse_genomes_project 11 60315776 60316083 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032771.1 MGP_BALBcJ_G0019189.1 mouse_genomes_project 11 101901470 101905483 + MGP_BALBcJ_P0032771 Ccdc103 protein_coding protein_coding MGP_BALBcJ_T0032772.1 MGP_BALBcJ_G0019189.1 mouse_genomes_project 11 101901511 101904790 + MGP_BALBcJ_P0032772 Ccdc103 protein_coding protein_coding MGP_BALBcJ_T0030150.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68367384 68371046 + MGP_BALBcJ_P0030150 Slc16a11 protein_coding protein_coding MGP_BALBcJ_T0030151.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368542 68371045 + MGP_BALBcJ_P0030151 Slc16a11 protein_coding protein_coding MGP_BALBcJ_T0030152.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368631 68369487 + Slc16a11 protein_coding retained_intron MGP_BALBcJ_T0030153.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368712 68371046 + MGP_BALBcJ_P0030153 Slc16a11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030154.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368747 68371047 + MGP_BALBcJ_P0030154 Slc16a11 protein_coding protein_coding MGP_BALBcJ_T0030155.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368751 68371050 + MGP_BALBcJ_P0030155 Slc16a11 protein_coding protein_coding MGP_BALBcJ_T0030156.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368751 68370165 + MGP_BALBcJ_P0030156 Slc16a11 protein_coding protein_coding MGP_BALBcJ_T0030157.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368753 68369620 + MGP_BALBcJ_P0030157 Slc16a11 protein_coding protein_coding MGP_BALBcJ_T0030158.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68368754 68370308 + Slc16a11 protein_coding processed_transcript MGP_BALBcJ_T0030159.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68369194 68370113 + Slc16a11 protein_coding retained_intron MGP_BALBcJ_T0030160.1 MGP_BALBcJ_G0018524.1 mouse_genomes_project 11 68369450 68371046 + Slc16a11 protein_coding retained_intron MGP_BALBcJ_T0102170.1 MGP_BALBcJ_G0039987.1 mouse_genomes_project 11 115990907 116000545 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031943.1 MGP_BALBcJ_G0018970.1 mouse_genomes_project 11 96129599 96149821 - MGP_BALBcJ_P0031943 Gpr179 protein_coding protein_coding MGP_BALBcJ_T0031944.1 MGP_BALBcJ_G0018970.1 mouse_genomes_project 11 96147212 96149882 - Gpr179 protein_coding retained_intron MGP_BALBcJ_T0011782.1 MGP_BALBcJ_G0009903.1 mouse_genomes_project 11 72461893 72466808 + MGP_BALBcJ_P0011782 Olfr404-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0031290.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83380154 83418318 - MGP_BALBcJ_P0031290 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031291.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83380154 83418267 - MGP_BALBcJ_P0031291 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031292.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83380154 83418346 - MGP_BALBcJ_P0031292 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031293.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83380599 83417794 - MGP_BALBcJ_P0031293 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031294.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83380654 83418175 - MGP_BALBcJ_P0031294 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031295.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83380765 83418269 - MGP_BALBcJ_P0031295 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031296.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83381929 83384129 - MGP_BALBcJ_P0031296 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031297.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83382305 83418254 - MGP_BALBcJ_P0031297 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031298.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83384081 83385645 - Ggnbp2 protein_coding processed_transcript MGP_BALBcJ_T0031299.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83400013 83406086 - Ggnbp2 protein_coding processed_transcript MGP_BALBcJ_T0031300.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83401561 83408251 - Ggnbp2 protein_coding retained_intron MGP_BALBcJ_T0031301.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83408310 83418020 - MGP_BALBcJ_P0031301 Ggnbp2 protein_coding protein_coding MGP_BALBcJ_T0031302.1 MGP_BALBcJ_G0018813.1 mouse_genomes_project 11 83416471 83418308 - Ggnbp2 protein_coding processed_transcript MGP_BALBcJ_T0028652.1 MGP_BALBcJ_G0018140.1 mouse_genomes_project 11 43952542 44012440 - MGP_BALBcJ_P0028652 Timd2 protein_coding protein_coding MGP_BALBcJ_T0028653.1 MGP_BALBcJ_G0018140.1 mouse_genomes_project 11 43992106 44030814 - MGP_BALBcJ_P0028653 Timd2 protein_coding protein_coding MGP_BALBcJ_T0028654.1 MGP_BALBcJ_G0018140.1 mouse_genomes_project 11 43992106 44022196 - MGP_BALBcJ_P0028654 Timd2 protein_coding protein_coding MGP_BALBcJ_T0028655.1 MGP_BALBcJ_G0018140.1 mouse_genomes_project 11 44009118 44030816 - MGP_BALBcJ_P0028655 Timd2 protein_coding protein_coding MGP_BALBcJ_T0032984.1 MGP_BALBcJ_G0019241.1 mouse_genomes_project 11 105276839 105283777 - MGP_BALBcJ_P0032984 Ftsj3 protein_coding protein_coding MGP_BALBcJ_T0032985.1 MGP_BALBcJ_G0019241.1 mouse_genomes_project 11 105277596 105278396 - Ftsj3 protein_coding retained_intron MGP_BALBcJ_T0032986.1 MGP_BALBcJ_G0019241.1 mouse_genomes_project 11 105278706 105280252 - Ftsj3 protein_coding retained_intron MGP_BALBcJ_T0032987.1 MGP_BALBcJ_G0019241.1 mouse_genomes_project 11 105281073 105281693 - Ftsj3 protein_coding retained_intron MGP_BALBcJ_T0032988.1 MGP_BALBcJ_G0019241.1 mouse_genomes_project 11 105281989 105283494 - Ftsj3 protein_coding retained_intron MGP_BALBcJ_T0032989.1 MGP_BALBcJ_G0019241.1 mouse_genomes_project 11 105282560 105283502 - Ftsj3 protein_coding retained_intron MGP_BALBcJ_T0031004.1 MGP_BALBcJ_G0018728.1 mouse_genomes_project 11 76942668 77076339 - MGP_BALBcJ_P0031004 Nlk protein_coding protein_coding MGP_BALBcJ_T0031005.1 MGP_BALBcJ_G0018728.1 mouse_genomes_project 11 76992842 77075460 - Nlk protein_coding retained_intron MGP_BALBcJ_T0028122.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17727528 17784391 - MGP_BALBcJ_P0028122 Aftph protein_coding protein_coding MGP_BALBcJ_T0028123.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17727535 17784393 - MGP_BALBcJ_P0028123 Aftph protein_coding protein_coding MGP_BALBcJ_T0028124.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17728168 17769914 - MGP_BALBcJ_P0028124 Aftph protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028125.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17728433 17735269 - Aftph protein_coding retained_intron MGP_BALBcJ_T0028126.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17728570 17768944 - MGP_BALBcJ_P0028126 Aftph protein_coding protein_coding MGP_BALBcJ_T0028127.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17738478 17754554 - Aftph protein_coding retained_intron MGP_BALBcJ_T0028128.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17745653 17754480 - Aftph protein_coding retained_intron MGP_BALBcJ_T0028129.1 MGP_BALBcJ_G0018009.1 mouse_genomes_project 11 17750854 17754460 - Aftph protein_coding retained_intron MGP_BALBcJ_T0006355.1 MGP_BALBcJ_G0005299.1 mouse_genomes_project 11 119901121 119902479 + Gm17586 lincRNA lincRNA MGP_BALBcJ_T0012757.1 MGP_BALBcJ_G0010854.1 mouse_genomes_project 11 114820962 114821499 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003311.1 MGP_BALBcJ_G0003056.1 mouse_genomes_project 11 108030423 108033127 - Gm11670 antisense antisense MGP_BALBcJ_T0012641.1 MGP_BALBcJ_G0010738.1 mouse_genomes_project 11 71388241 71389080 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032905.1 MGP_BALBcJ_G0019221.1 mouse_genomes_project 11 103695416 103769494 + MGP_BALBcJ_P0032905 protein_coding protein_coding MGP_BALBcJ_T0032906.1 MGP_BALBcJ_G0019221.1 mouse_genomes_project 11 103714098 103735054 + protein_coding processed_transcript MGP_BALBcJ_T0003117.1 MGP_BALBcJ_G0002894.1 mouse_genomes_project 11 21243702 21256471 - 4930538E20Rik antisense antisense MGP_BALBcJ_T0003118.1 MGP_BALBcJ_G0002894.1 mouse_genomes_project 11 21250052 21256428 - 4930538E20Rik antisense antisense MGP_BALBcJ_T0031418.1 MGP_BALBcJ_G0018841.1 mouse_genomes_project 11 85682655 85784932 + MGP_BALBcJ_P0031418 Trim37 protein_coding protein_coding MGP_BALBcJ_T0031419.1 MGP_BALBcJ_G0018841.1 mouse_genomes_project 11 85682883 85714385 + MGP_BALBcJ_P0031419 Trim37 protein_coding protein_coding MGP_BALBcJ_T0031420.1 MGP_BALBcJ_G0018841.1 mouse_genomes_project 11 85750931 85772879 + Trim37 protein_coding retained_intron MGP_BALBcJ_T0031421.1 MGP_BALBcJ_G0018841.1 mouse_genomes_project 11 85754534 85782507 + MGP_BALBcJ_P0031421 Trim37 protein_coding protein_coding MGP_BALBcJ_T0031231.1 MGP_BALBcJ_G0018795.1 mouse_genomes_project 11 82174490 82175066 - MGP_BALBcJ_P0031231 Rpl9-ps1 protein_coding protein_coding MGP_BALBcJ_T0030145.1 MGP_BALBcJ_G0018522.1 mouse_genomes_project 11 68284409 68288701 + Mgl2 protein_coding processed_transcript MGP_BALBcJ_T0030146.1 MGP_BALBcJ_G0018522.1 mouse_genomes_project 11 68284423 68293098 + MGP_BALBcJ_P0030146 Mgl2 protein_coding protein_coding MGP_BALBcJ_T0028486.1 MGP_BALBcJ_G0018095.1 mouse_genomes_project 11 32097781 32123001 - MGP_BALBcJ_P0028486 Spdl1 protein_coding protein_coding MGP_BALBcJ_T0028487.1 MGP_BALBcJ_G0018095.1 mouse_genomes_project 11 32110867 32112778 - Spdl1 protein_coding retained_intron MGP_BALBcJ_T0028488.1 MGP_BALBcJ_G0018095.1 mouse_genomes_project 11 32119753 32122952 - Spdl1 protein_coding retained_intron MGP_BALBcJ_T0009704.1 MGP_BALBcJ_G0007829.1 mouse_genomes_project 11 85668671 85668757 + Mir301 miRNA miRNA MGP_BALBcJ_T0003097.1 MGP_BALBcJ_G0002880.1 mouse_genomes_project 11 2453045 2461112 + Gm11963 antisense antisense MGP_BALBcJ_T0102160.1 MGP_BALBcJ_G0039977.1 mouse_genomes_project 11 93570409 93571138 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003209.1 MGP_BALBcJ_G0002973.1 mouse_genomes_project 11 74163018 74163544 + Gm16075 antisense antisense MGP_BALBcJ_T0033590.1 MGP_BALBcJ_G0019365.1 mouse_genomes_project 11 115533029 115536028 + MGP_BALBcJ_P0033590 Galr2 protein_coding protein_coding MGP_BALBcJ_T0033591.1 MGP_BALBcJ_G0019365.1 mouse_genomes_project 11 115533576 115535751 + Galr2 protein_coding processed_transcript MGP_BALBcJ_T0012602.1 MGP_BALBcJ_G0010699.1 mouse_genomes_project 11 57396726 57398208 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003144.1 MGP_BALBcJ_G0002919.1 mouse_genomes_project 11 49979902 49990027 + A630014C17Rik antisense antisense MGP_BALBcJ_T0017226.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111805207 111853696 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017227.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111806095 111813444 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017228.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111806119 111810622 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017229.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111810424 111818693 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017230.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111811410 111813444 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017231.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111813320 111853262 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017232.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111813407 111853680 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017233.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111818762 111833513 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017234.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111818878 111853702 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017235.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111818953 111853680 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017236.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111826292 111833672 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017237.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111826403 111853703 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017238.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111826510 111853696 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017239.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111829796 111853681 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017240.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111829796 111853681 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017241.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111829798 111926433 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017242.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111833477 111853679 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0017243.1 MGP_BALBcJ_G0015154.1 mouse_genomes_project 11 111861203 111886597 - BC006965 processed_transcript processed_transcript MGP_BALBcJ_T0003190.1 MGP_BALBcJ_G0002958.1 mouse_genomes_project 11 64947111 64991711 - Gm12298 antisense antisense MGP_BALBcJ_T0006196.1 MGP_BALBcJ_G0005177.1 mouse_genomes_project 11 40422650 40435264 - Gm12145 lincRNA lincRNA MGP_BALBcJ_T0100513.1 MGP_BALBcJ_G0038549.1 mouse_genomes_project 11 60618499 60618571 + Snord49b snoRNA snoRNA MGP_BALBcJ_T0012631.1 MGP_BALBcJ_G0010728.1 mouse_genomes_project 11 68282968 68283342 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006321.1 MGP_BALBcJ_G0005273.1 mouse_genomes_project 11 110929953 110935180 - Gm11674 lincRNA lincRNA MGP_BALBcJ_T0032428.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100144269 100179934 - MGP_BALBcJ_P0032428 Ezh1 protein_coding protein_coding MGP_BALBcJ_T0032429.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100144270 100179921 - MGP_BALBcJ_P0032429 Ezh1 protein_coding protein_coding MGP_BALBcJ_T0032430.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100146429 100147577 - Ezh1 protein_coding processed_transcript MGP_BALBcJ_T0032431.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100146884 100156714 - Ezh1 protein_coding processed_transcript MGP_BALBcJ_T0032432.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100151765 100154071 - Ezh1 protein_coding processed_transcript MGP_BALBcJ_T0032433.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100152305 100179889 - MGP_BALBcJ_P0032433 Ezh1 protein_coding protein_coding MGP_BALBcJ_T0032434.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100152430 100164050 - Ezh1 protein_coding processed_transcript MGP_BALBcJ_T0032435.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100161062 100162877 - Ezh1 protein_coding processed_transcript MGP_BALBcJ_T0032436.1 MGP_BALBcJ_G0019129.1 mouse_genomes_project 11 100171866 100179913 - Ezh1 protein_coding processed_transcript MGP_BALBcJ_T0031838.1 MGP_BALBcJ_G0018949.1 mouse_genomes_project 11 95134486 95138194 + Hoxb2 protein_coding retained_intron MGP_BALBcJ_T0031839.1 MGP_BALBcJ_G0018949.1 mouse_genomes_project 11 95135592 95138548 + MGP_BALBcJ_P0031839 Hoxb2 protein_coding protein_coding MGP_BALBcJ_T0027775.1 MGP_BALBcJ_G0017929.1 mouse_genomes_project 11 1662737 1672648 - MGP_BALBcJ_P0027775 Cabp7 protein_coding protein_coding MGP_BALBcJ_T0032395.1 MGP_BALBcJ_G0019120.1 mouse_genomes_project 11 100034325 100038405 + MGP_BALBcJ_P0032395 Coasy protein_coding protein_coding MGP_BALBcJ_T0032396.1 MGP_BALBcJ_G0019120.1 mouse_genomes_project 11 100034378 100037406 + Coasy protein_coding processed_transcript MGP_BALBcJ_T0032397.1 MGP_BALBcJ_G0019120.1 mouse_genomes_project 11 100034385 100038405 + MGP_BALBcJ_P0032397 Coasy protein_coding protein_coding MGP_BALBcJ_T0032398.1 MGP_BALBcJ_G0019120.1 mouse_genomes_project 11 100035655 100036940 + Coasy protein_coding processed_transcript MGP_BALBcJ_T0029658.1 MGP_BALBcJ_G0018411.1 mouse_genomes_project 11 62457908 62459406 - MGP_BALBcJ_P0029658 protein_coding protein_coding MGP_BALBcJ_T0099277.1 MGP_BALBcJ_G0037313.1 mouse_genomes_project 11 86000432 86000596 + Rnu1a1 snRNA snRNA MGP_BALBcJ_T0017198.1 MGP_BALBcJ_G0015133.1 mouse_genomes_project 11 95234495 95250649 - Gm11529 processed_transcript processed_transcript MGP_BALBcJ_T0029144.1 MGP_BALBcJ_G0018273.1 mouse_genomes_project 11 53332076 53427796 - MGP_BALBcJ_P0029144 Glra1 protein_coding protein_coding MGP_BALBcJ_T0029145.1 MGP_BALBcJ_G0018273.1 mouse_genomes_project 11 53332651 53427708 - MGP_BALBcJ_P0029145 Glra1 protein_coding protein_coding MGP_BALBcJ_T0034183.1 MGP_BALBcJ_G0019480.1 mouse_genomes_project 11 120405137 120407600 - MGP_BALBcJ_P0034183 Tex19.2 protein_coding protein_coding MGP_BALBcJ_T0012677.1 MGP_BALBcJ_G0010774.1 mouse_genomes_project 11 83620149 83620676 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012709.1 MGP_BALBcJ_G0010806.1 mouse_genomes_project 11 96800533 96800977 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034016.1 MGP_BALBcJ_G0019448.1 mouse_genomes_project 11 119748571 119753024 + MGP_BALBcJ_P0034016 Mrpl12 protein_coding protein_coding MGP_BALBcJ_T0034017.1 MGP_BALBcJ_G0019448.1 mouse_genomes_project 11 119748985 119752416 + Mrpl12 protein_coding processed_transcript MGP_BALBcJ_T0028648.1 MGP_BALBcJ_G0018137.1 mouse_genomes_project 11 43845840 43859798 + MGP_BALBcJ_P0028648 Gm12169 protein_coding protein_coding MGP_BALBcJ_T0032485.1 MGP_BALBcJ_G0019138.1 mouse_genomes_project 11 100285240 100294073 + MGP_BALBcJ_P0032485 Aoc3 protein_coding protein_coding MGP_BALBcJ_T0032486.1 MGP_BALBcJ_G0019138.1 mouse_genomes_project 11 100285704 100297657 + MGP_BALBcJ_P0032486 Aoc3 protein_coding protein_coding MGP_BALBcJ_T0033407.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114797240 114817945 + MGP_BALBcJ_P0033407 Nup85 protein_coding protein_coding MGP_BALBcJ_T0033408.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114797331 114803768 + Nup85 protein_coding processed_transcript MGP_BALBcJ_T0033409.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114803991 114815803 + MGP_BALBcJ_P0033409 Nup85 protein_coding protein_coding MGP_BALBcJ_T0033410.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114811556 114815999 + MGP_BALBcJ_P0033410 Nup85 protein_coding protein_coding MGP_BALBcJ_T0033411.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114814463 114815379 + Nup85 protein_coding processed_transcript MGP_BALBcJ_T0033412.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114815055 114815994 + Nup85 protein_coding processed_transcript MGP_BALBcJ_T0033413.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114815600 114817866 + Nup85 protein_coding processed_transcript MGP_BALBcJ_T0033414.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114815707 114816238 + Nup85 protein_coding processed_transcript MGP_BALBcJ_T0033415.1 MGP_BALBcJ_G0019336.1 mouse_genomes_project 11 114817016 114817743 + Nup85 protein_coding processed_transcript MGP_BALBcJ_T0033941.1 MGP_BALBcJ_G0019434.1 mouse_genomes_project 11 119358913 119360691 + MGP_BALBcJ_P0033941 1810043H04Rik protein_coding protein_coding MGP_BALBcJ_T0033942.1 MGP_BALBcJ_G0019434.1 mouse_genomes_project 11 119358929 119360349 + MGP_BALBcJ_P0033942 1810043H04Rik protein_coding protein_coding MGP_BALBcJ_T0033943.1 MGP_BALBcJ_G0019434.1 mouse_genomes_project 11 119359084 119360400 + 1810043H04Rik protein_coding retained_intron MGP_BALBcJ_T0012427.1 MGP_BALBcJ_G0010524.1 mouse_genomes_project 11 357774 358250 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032850.1 MGP_BALBcJ_G0019209.1 mouse_genomes_project 11 102678202 102699350 - MGP_BALBcJ_P0032850 Gosr2 protein_coding protein_coding MGP_BALBcJ_T0032851.1 MGP_BALBcJ_G0019209.1 mouse_genomes_project 11 102680168 102699146 - MGP_BALBcJ_P0032851 Gosr2 protein_coding protein_coding MGP_BALBcJ_T0032852.1 MGP_BALBcJ_G0019209.1 mouse_genomes_project 11 102680375 102699150 - Gosr2 protein_coding processed_transcript MGP_BALBcJ_T0031186.1 MGP_BALBcJ_G0018780.1 mouse_genomes_project 11 81614629 81620451 + MGP_BALBcJ_P0031186 Slfn1 protein_coding protein_coding MGP_BALBcJ_T0031913.1 MGP_BALBcJ_G0018965.1 mouse_genomes_project 11 95897135 95914187 - MGP_BALBcJ_P0031913 Tbx21 protein_coding protein_coding MGP_BALBcJ_T0012751.1 MGP_BALBcJ_G0010848.1 mouse_genomes_project 11 112935997 112936502 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012525.1 MGP_BALBcJ_G0010622.1 mouse_genomes_project 11 27800862 27802491 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009699.1 MGP_BALBcJ_G0007824.1 mouse_genomes_project 11 81443825 81443888 - Mir7679 miRNA miRNA MGP_BALBcJ_T0006251.1 MGP_BALBcJ_G0005223.1 mouse_genomes_project 11 73706406 73707018 - Gm12336 lincRNA lincRNA MGP_BALBcJ_T0033462.1 MGP_BALBcJ_G0019343.1 mouse_genomes_project 11 115040542 115054912 - MGP_BALBcJ_P0033462 Caskin2 protein_coding protein_coding MGP_BALBcJ_T0033463.1 MGP_BALBcJ_G0019343.1 mouse_genomes_project 11 115041359 115042241 - Caskin2 protein_coding processed_transcript MGP_BALBcJ_T0033464.1 MGP_BALBcJ_G0019343.1 mouse_genomes_project 11 115046095 115049383 - MGP_BALBcJ_P0033464 Caskin2 protein_coding protein_coding MGP_BALBcJ_T0033465.1 MGP_BALBcJ_G0019343.1 mouse_genomes_project 11 115048057 115054921 - MGP_BALBcJ_P0033465 Caskin2 protein_coding protein_coding MGP_BALBcJ_T0012591.1 MGP_BALBcJ_G0010688.1 mouse_genomes_project 11 55258493 55259231 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102148.1 MGP_BALBcJ_G0039965.1 mouse_genomes_project 11 72539254 72540195 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0028548.1 MGP_BALBcJ_G0018110.1 mouse_genomes_project 11 40356359 40357872 + MGP_BALBcJ_P0028548 Gm9972 protein_coding protein_coding MGP_BALBcJ_T0032048.1 MGP_BALBcJ_G0018995.1 mouse_genomes_project 11 97186285 97194999 + MGP_BALBcJ_P0032048 Ppp1r1b protein_coding protein_coding MGP_BALBcJ_T0032049.1 MGP_BALBcJ_G0018995.1 mouse_genomes_project 11 97188046 97194984 + Ppp1r1b protein_coding retained_intron MGP_BALBcJ_T0032050.1 MGP_BALBcJ_G0018995.1 mouse_genomes_project 11 97188406 97194587 + Ppp1r1b protein_coding retained_intron MGP_BALBcJ_T0032051.1 MGP_BALBcJ_G0018995.1 mouse_genomes_project 11 97188680 97194482 + Ppp1r1b protein_coding processed_transcript MGP_BALBcJ_T0032052.1 MGP_BALBcJ_G0018995.1 mouse_genomes_project 11 97191787 97194299 + Ppp1r1b protein_coding processed_transcript MGP_BALBcJ_T0006333.1 MGP_BALBcJ_G0005281.1 mouse_genomes_project 11 113432001 113433284 + Gm11691 lincRNA lincRNA MGP_BALBcJ_T0027767.1 MGP_BALBcJ_G0017926.1 mouse_genomes_project 11 1563122 1607718 + MGP_BALBcJ_P0027767 Ascc2 protein_coding protein_coding MGP_BALBcJ_T0027768.1 MGP_BALBcJ_G0017926.1 mouse_genomes_project 11 1563122 1610037 + MGP_BALBcJ_P0027768 Ascc2 protein_coding protein_coding MGP_BALBcJ_T0029205.1 MGP_BALBcJ_G0018293.1 mouse_genomes_project 11 56264589 56269502 + MGP_BALBcJ_P0029205 1810065E05Rik protein_coding protein_coding MGP_BALBcJ_T0033999.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119728566 119731308 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034000.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729024 119730975 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034001.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729138 119731301 - MGP_BALBcJ_P0034001 Arl16 protein_coding protein_coding MGP_BALBcJ_T0034002.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729291 119731166 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034003.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729298 119731035 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034004.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729313 119731121 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034005.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729454 119731182 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034006.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729468 119731122 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034007.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729470 119731097 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034008.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119729615 119731134 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0034009.1 MGP_BALBcJ_G0019446.1 mouse_genomes_project 11 119730605 119731154 - Arl16 protein_coding processed_transcript MGP_BALBcJ_T0028943.1 MGP_BALBcJ_G0018221.1 mouse_genomes_project 11 49739603 49768552 + MGP_BALBcJ_P0028943 Ppp2ca protein_coding protein_coding MGP_BALBcJ_T0028944.1 MGP_BALBcJ_G0018221.1 mouse_genomes_project 11 49759604 49760554 + Ppp2ca protein_coding retained_intron MGP_BALBcJ_T0101611.1 MGP_BALBcJ_G0039630.1 mouse_genomes_project 11 3638440 3648478 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101612.1 MGP_BALBcJ_G0039630.1 mouse_genomes_project 11 3638666 3639132 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101613.1 MGP_BALBcJ_G0039630.1 mouse_genomes_project 11 3639436 3646975 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101614.1 MGP_BALBcJ_G0039630.1 mouse_genomes_project 11 3639709 3648455 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0032253.1 MGP_BALBcJ_G0019086.1 mouse_genomes_project 11 99108326 99115243 - MGP_BALBcJ_P0032253 Krt9 protein_coding protein_coding MGP_BALBcJ_T0006256.1 MGP_BALBcJ_G0005228.1 mouse_genomes_project 11 76818454 76819249 + Gm11195 lincRNA lincRNA MGP_BALBcJ_T0030183.1 MGP_BALBcJ_G0018530.1 mouse_genomes_project 11 68396078 68409822 - MGP_BALBcJ_P0030183 Alox12 protein_coding protein_coding MGP_BALBcJ_T0030184.1 MGP_BALBcJ_G0018530.1 mouse_genomes_project 11 68403433 68409810 - MGP_BALBcJ_P0030184 Alox12 protein_coding protein_coding MGP_BALBcJ_T0017225.1 MGP_BALBcJ_G0015153.1 mouse_genomes_project 11 106869883 106873370 + Gm11650 processed_transcript processed_transcript MGP_BALBcJ_T0031046.1 MGP_BALBcJ_G0018741.1 mouse_genomes_project 11 78005126 78112506 + MGP_BALBcJ_P0031046 Rab11fip4 protein_coding protein_coding MGP_BALBcJ_T0031047.1 MGP_BALBcJ_G0018741.1 mouse_genomes_project 11 78075173 78098124 + MGP_BALBcJ_P0031047 Rab11fip4 protein_coding protein_coding MGP_BALBcJ_T0012479.1 MGP_BALBcJ_G0010576.1 mouse_genomes_project 11 16383351 16386933 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033726.1 MGP_BALBcJ_G0019390.1 mouse_genomes_project 11 116718205 116722852 + MGP_BALBcJ_P0033726 Gm11733 protein_coding protein_coding MGP_BALBcJ_T0032195.1 MGP_BALBcJ_G0019037.1 mouse_genomes_project 11 98394194 98401450 - MGP_BALBcJ_P0032195 Krt39 protein_coding protein_coding MGP_BALBcJ_T0032196.1 MGP_BALBcJ_G0019037.1 mouse_genomes_project 11 98394704 98401370 - MGP_BALBcJ_P0032196 Krt39 protein_coding protein_coding MGP_BALBcJ_T0100528.1 MGP_BALBcJ_G0038564.1 mouse_genomes_project 11 75995461 75995593 - Gm23132 snoRNA snoRNA MGP_BALBcJ_T0102168.1 MGP_BALBcJ_G0039985.1 mouse_genomes_project 11 100308012 100308916 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011286.1 MGP_BALBcJ_G0009411.1 mouse_genomes_project 11 84890777 84890880 + Gm25427 misc_RNA misc_RNA MGP_BALBcJ_T0098311.1 MGP_BALBcJ_G0036365.1 mouse_genomes_project 11 71596400 71597350 - pseudogene pseudogene MGP_BALBcJ_T0031792.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94587194 94595729 + MGP_BALBcJ_P0031792 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0031793.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94592289 94595729 + MGP_BALBcJ_P0031793 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0031794.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94592303 94595729 + MGP_BALBcJ_P0031794 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0031795.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94592662 94595729 + MGP_BALBcJ_P0031795 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0031796.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94592664 94595729 + MGP_BALBcJ_P0031796 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0031797.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94593226 94595729 + MGP_BALBcJ_P0031797 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0031798.1 MGP_BALBcJ_G0018932.1 mouse_genomes_project 11 94593603 94595729 + MGP_BALBcJ_P0031798 Gngt2 protein_coding protein_coding MGP_BALBcJ_T0032774.1 MGP_BALBcJ_G0019191.1 mouse_genomes_project 11 101907602 101917367 - MGP_BALBcJ_P0032774 Gfap protein_coding protein_coding MGP_BALBcJ_T0032775.1 MGP_BALBcJ_G0019191.1 mouse_genomes_project 11 101910426 101917436 - MGP_BALBcJ_P0032775 Gfap protein_coding protein_coding MGP_BALBcJ_T0032776.1 MGP_BALBcJ_G0019191.1 mouse_genomes_project 11 101914722 101921148 - Gfap protein_coding processed_transcript MGP_BALBcJ_T0030475.1 MGP_BALBcJ_G0018593.1 mouse_genomes_project 11 71368273 71380540 + MGP_BALBcJ_P0030475 P2rx5 protein_coding protein_coding MGP_BALBcJ_T0030476.1 MGP_BALBcJ_G0018593.1 mouse_genomes_project 11 71368437 71378353 + MGP_BALBcJ_P0030476 P2rx5 protein_coding protein_coding MGP_BALBcJ_T0030477.1 MGP_BALBcJ_G0018593.1 mouse_genomes_project 11 71368437 71378353 + MGP_BALBcJ_P0030477 P2rx5 protein_coding protein_coding MGP_BALBcJ_T0029240.1 MGP_BALBcJ_G0018316.1 mouse_genomes_project 11 56736964 56739140 + MGP_BALBcJ_P0029240 protein_coding protein_coding MGP_BALBcJ_T0003098.1 MGP_BALBcJ_G0002881.1 mouse_genomes_project 11 2877654 2879105 + Gm11967 antisense antisense MGP_BALBcJ_T0006147.1 MGP_BALBcJ_G0005135.1 mouse_genomes_project 11 11552496 11589550 - 1700046C09Rik lincRNA lincRNA MGP_BALBcJ_T0028692.1 MGP_BALBcJ_G0018154.1 mouse_genomes_project 11 46432439 46440892 - MGP_BALBcJ_P0028692 Tgtp1 protein_coding protein_coding MGP_BALBcJ_T0028695.1 MGP_BALBcJ_G0018154.1 mouse_genomes_project 11 46435146 46440894 - Tgtp1 protein_coding processed_transcript MGP_BALBcJ_T0003339.1 MGP_BALBcJ_G0003079.1 mouse_genomes_project 11 119497153 119498042 - Gm11772 antisense antisense MGP_BALBcJ_T0031121.1 MGP_BALBcJ_G0018758.1 mouse_genomes_project 11 79313571 80405242 - MGP_BALBcJ_P0031121 Asic2 protein_coding protein_coding MGP_BALBcJ_T0031122.1 MGP_BALBcJ_G0018758.1 mouse_genomes_project 11 79313571 79586429 - MGP_BALBcJ_P0031122 Asic2 protein_coding protein_coding MGP_BALBcJ_T0006162.1 MGP_BALBcJ_G0005149.1 mouse_genomes_project 11 19791005 19794905 + Gm12056 lincRNA lincRNA MGP_BALBcJ_T0009690.1 MGP_BALBcJ_G0007815.1 mouse_genomes_project 11 73750370 73750465 + Mir22 miRNA miRNA MGP_BALBcJ_T0030376.1 MGP_BALBcJ_G0018567.1 mouse_genomes_project 11 70208953 70218479 - MGP_BALBcJ_P0030376 Aipl1 protein_coding protein_coding MGP_BALBcJ_T0030377.1 MGP_BALBcJ_G0018567.1 mouse_genomes_project 11 70209707 70218499 - MGP_BALBcJ_P0030377 Aipl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028831.1 MGP_BALBcJ_G0018190.1 mouse_genomes_project 11 48382112 48398936 - MGP_BALBcJ_P0028831 Zfp354c protein_coding protein_coding MGP_BALBcJ_T0028832.1 MGP_BALBcJ_G0018190.1 mouse_genomes_project 11 48385590 48397704 - MGP_BALBcJ_P0028832 Zfp354c protein_coding protein_coding MGP_BALBcJ_T0028833.1 MGP_BALBcJ_G0018190.1 mouse_genomes_project 11 48388219 48398932 - Zfp354c protein_coding processed_transcript MGP_BALBcJ_T0028834.1 MGP_BALBcJ_G0018190.1 mouse_genomes_project 11 48397521 48398970 - Zfp354c protein_coding processed_transcript MGP_BALBcJ_T0029344.1 MGP_BALBcJ_G0018350.1 mouse_genomes_project 11 57890378 57892146 - MGP_BALBcJ_P0029344 Rasd1 protein_coding protein_coding MGP_BALBcJ_T0030750.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74745102 74838894 - MGP_BALBcJ_P0030750 Abr protein_coding protein_coding MGP_BALBcJ_T0030751.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74745102 74891639 - MGP_BALBcJ_P0030751 Abr protein_coding protein_coding MGP_BALBcJ_T0030752.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74745103 74838471 - MGP_BALBcJ_P0030752 Abr protein_coding protein_coding MGP_BALBcJ_T0030753.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74745119 74798025 - MGP_BALBcJ_P0030753 Abr protein_coding protein_coding MGP_BALBcJ_T0030754.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74747476 74824892 - MGP_BALBcJ_P0030754 Abr protein_coding protein_coding MGP_BALBcJ_T0030755.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74751417 74765590 - Abr protein_coding processed_transcript MGP_BALBcJ_T0030756.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74783099 74797865 - MGP_BALBcJ_P0030756 Abr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030757.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74787014 74824441 - Abr protein_coding retained_intron MGP_BALBcJ_T0030758.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74793851 74823377 - MGP_BALBcJ_P0030758 Abr protein_coding protein_coding MGP_BALBcJ_T0030759.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74808418 74897855 - MGP_BALBcJ_P0030759 Abr protein_coding protein_coding MGP_BALBcJ_T0030760.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74808472 74942310 - MGP_BALBcJ_P0030760 Abr protein_coding protein_coding MGP_BALBcJ_T0030761.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74808528 74933393 - MGP_BALBcJ_P0030761 Abr protein_coding protein_coding MGP_BALBcJ_T0030762.1 MGP_BALBcJ_G0018675.1 mouse_genomes_project 11 74815161 74824420 - Abr protein_coding processed_transcript MGP_BALBcJ_T0003139.1 MGP_BALBcJ_G0002915.1 mouse_genomes_project 11 48863448 48865037 + Gm12569 antisense antisense MGP_BALBcJ_T0003140.1 MGP_BALBcJ_G0002915.1 mouse_genomes_project 11 48864108 48864892 + Gm12569 antisense antisense MGP_BALBcJ_T0029127.1 MGP_BALBcJ_G0018268.1 mouse_genomes_project 11 53019476 53051818 + MGP_BALBcJ_P0029127 Slc36a1 protein_coding protein_coding MGP_BALBcJ_T0029128.1 MGP_BALBcJ_G0018268.1 mouse_genomes_project 11 53019488 53029381 + Slc36a1 protein_coding processed_transcript MGP_BALBcJ_T0029129.1 MGP_BALBcJ_G0018268.1 mouse_genomes_project 11 53019500 53037192 + MGP_BALBcJ_P0029129 Slc36a1 protein_coding protein_coding MGP_BALBcJ_T0029130.1 MGP_BALBcJ_G0018268.1 mouse_genomes_project 11 53019502 53049325 + MGP_BALBcJ_P0029130 Slc36a1 protein_coding protein_coding MGP_BALBcJ_T0029131.1 MGP_BALBcJ_G0018268.1 mouse_genomes_project 11 53028913 53047784 + MGP_BALBcJ_P0029131 Slc36a1 protein_coding protein_coding MGP_BALBcJ_T0028783.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47751053 47762533 - MGP_BALBcJ_P0028783 Sqstm1 protein_coding protein_coding MGP_BALBcJ_T0028784.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47751839 47762569 - MGP_BALBcJ_P0028784 Sqstm1 protein_coding protein_coding MGP_BALBcJ_T0028785.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47751854 47754642 - MGP_BALBcJ_P0028785 Sqstm1 protein_coding protein_coding MGP_BALBcJ_T0028786.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47752298 47762507 - MGP_BALBcJ_P0028786 Sqstm1 protein_coding protein_coding MGP_BALBcJ_T0028787.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47753999 47757987 - Sqstm1 protein_coding retained_intron MGP_BALBcJ_T0028788.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47754130 47754806 - Sqstm1 protein_coding retained_intron MGP_BALBcJ_T0028789.1 MGP_BALBcJ_G0018181.1 mouse_genomes_project 11 47757565 47759206 - Sqstm1 protein_coding retained_intron MGP_BALBcJ_T0012630.1 MGP_BALBcJ_G0010727.1 mouse_genomes_project 11 68104441 68104933 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012474.1 MGP_BALBcJ_G0010571.1 mouse_genomes_project 11 15229540 15230072 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003221.1 MGP_BALBcJ_G0002984.1 mouse_genomes_project 11 79509014 79519948 + Gm11417 antisense antisense MGP_BALBcJ_T0029169.1 MGP_BALBcJ_G0018283.1 mouse_genomes_project 11 55930183 55946228 + MGP_BALBcJ_P0029169 Cnot8 protein_coding protein_coding MGP_BALBcJ_T0029170.1 MGP_BALBcJ_G0018283.1 mouse_genomes_project 11 55930259 55946228 + MGP_BALBcJ_P0029170 Cnot8 protein_coding protein_coding MGP_BALBcJ_T0029171.1 MGP_BALBcJ_G0018283.1 mouse_genomes_project 11 55930396 55939016 + MGP_BALBcJ_P0029171 Cnot8 protein_coding protein_coding MGP_BALBcJ_T0029172.1 MGP_BALBcJ_G0018283.1 mouse_genomes_project 11 55941671 55944892 + Cnot8 protein_coding processed_transcript MGP_BALBcJ_T0032488.1 MGP_BALBcJ_G0019140.1 mouse_genomes_project 11 100377669 100396646 - MGP_BALBcJ_P0032488 Gm27029 protein_coding protein_coding MGP_BALBcJ_T0032490.1 MGP_BALBcJ_G0019140.1 mouse_genomes_project 11 100377844 100396923 - MGP_BALBcJ_P0032490 Gm27029 protein_coding protein_coding MGP_BALBcJ_T0012617.1 MGP_BALBcJ_G0010714.1 mouse_genomes_project 11 60714931 60715229 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012448.1 MGP_BALBcJ_G0010545.1 mouse_genomes_project 11 3759590 3761051 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012577.1 MGP_BALBcJ_G0010674.1 mouse_genomes_project 11 51406818 51407451 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012612.1 MGP_BALBcJ_G0010709.1 mouse_genomes_project 11 59200200 59200907 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012724.1 MGP_BALBcJ_G0010821.1 mouse_genomes_project 11 101506872 101507043 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009678.1 MGP_BALBcJ_G0007803.1 mouse_genomes_project 11 68389348 68389432 + Mir497 miRNA miRNA MGP_BALBcJ_T0033653.1 MGP_BALBcJ_G0019376.1 mouse_genomes_project 11 115848516 115875297 - MGP_BALBcJ_P0033653 Rhbdf2 protein_coding protein_coding MGP_BALBcJ_T0033654.1 MGP_BALBcJ_G0019376.1 mouse_genomes_project 11 115848520 115878108 - MGP_BALBcJ_P0033654 Rhbdf2 protein_coding protein_coding MGP_BALBcJ_T0033655.1 MGP_BALBcJ_G0019376.1 mouse_genomes_project 11 115851437 115852956 - Rhbdf2 protein_coding processed_transcript MGP_BALBcJ_T0033656.1 MGP_BALBcJ_G0019376.1 mouse_genomes_project 11 115853613 115875344 - Rhbdf2 protein_coding retained_intron MGP_BALBcJ_T0028471.1 MGP_BALBcJ_G0018091.1 mouse_genomes_project 11 31327803 31373610 + MGP_BALBcJ_P0028471 Lcp2 protein_coding protein_coding MGP_BALBcJ_T0028472.1 MGP_BALBcJ_G0018091.1 mouse_genomes_project 11 31328092 31371538 + MGP_BALBcJ_P0028472 Lcp2 protein_coding protein_coding MGP_BALBcJ_T0028473.1 MGP_BALBcJ_G0018091.1 mouse_genomes_project 11 31328125 31373595 + MGP_BALBcJ_P0028473 Lcp2 protein_coding protein_coding MGP_BALBcJ_T0028474.1 MGP_BALBcJ_G0018091.1 mouse_genomes_project 11 31359570 31359986 + Lcp2 protein_coding processed_transcript MGP_BALBcJ_T0028475.1 MGP_BALBcJ_G0018091.1 mouse_genomes_project 11 31368403 31372067 + Lcp2 protein_coding processed_transcript MGP_BALBcJ_T0032279.1 MGP_BALBcJ_G0019095.1 mouse_genomes_project 11 99336668 99343064 - MGP_BALBcJ_P0032279 P3h4 protein_coding protein_coding MGP_BALBcJ_T0032280.1 MGP_BALBcJ_G0019095.1 mouse_genomes_project 11 99337578 99340102 - MGP_BALBcJ_P0032280 P3h4 protein_coding protein_coding MGP_BALBcJ_T0027953.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3532312 3583773 + MGP_BALBcJ_P0027953 Ccm2 protein_coding protein_coding MGP_BALBcJ_T0027954.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3532335 3576503 + MGP_BALBcJ_P0027954 Ccm2 protein_coding protein_coding MGP_BALBcJ_T0027955.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3545560 3583763 + MGP_BALBcJ_P0027955 Ccm2 protein_coding protein_coding MGP_BALBcJ_T0027956.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3546502 3580162 + MGP_BALBcJ_P0027956 Ccm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027957.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3546511 3548344 + Ccm2 protein_coding processed_transcript MGP_BALBcJ_T0027958.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3546524 3580099 + MGP_BALBcJ_P0027958 Ccm2 protein_coding protein_coding MGP_BALBcJ_T0027959.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3546620 3583771 + MGP_BALBcJ_P0027959 Ccm2 protein_coding protein_coding MGP_BALBcJ_T0027960.1 MGP_BALBcJ_G0017967.1 mouse_genomes_project 11 3580076 3581298 + Ccm2 protein_coding retained_intron MGP_BALBcJ_T0102130.1 MGP_BALBcJ_G0039947.1 mouse_genomes_project 11 43861423 43861723 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0028464.1 MGP_BALBcJ_G0018088.1 mouse_genomes_project 11 30868182 30894811 + MGP_BALBcJ_P0028464 D130052B06Rik protein_coding protein_coding MGP_BALBcJ_T0003264.1 MGP_BALBcJ_G0003016.1 mouse_genomes_project 11 96547545 96549573 + Gm11614 antisense antisense MGP_BALBcJ_T0029542.1 MGP_BALBcJ_G0018388.1 mouse_genomes_project 11 59875587 59934524 - MGP_BALBcJ_P0029542 Akap10 protein_coding protein_coding MGP_BALBcJ_T0029543.1 MGP_BALBcJ_G0018388.1 mouse_genomes_project 11 59875952 59882739 - Akap10 protein_coding processed_transcript MGP_BALBcJ_T0029544.1 MGP_BALBcJ_G0018388.1 mouse_genomes_project 11 59877296 59934282 - MGP_BALBcJ_P0029544 Akap10 protein_coding protein_coding MGP_BALBcJ_T0029545.1 MGP_BALBcJ_G0018388.1 mouse_genomes_project 11 59896074 59934498 - MGP_BALBcJ_P0029545 Akap10 protein_coding protein_coding MGP_BALBcJ_T0029546.1 MGP_BALBcJ_G0018388.1 mouse_genomes_project 11 59926192 59934479 - Akap10 protein_coding processed_transcript MGP_BALBcJ_T0028371.1 MGP_BALBcJ_G0018062.1 mouse_genomes_project 11 28216005 28225285 - MGP_BALBcJ_P0028371 Chac2 protein_coding protein_coding MGP_BALBcJ_T0028372.1 MGP_BALBcJ_G0018062.1 mouse_genomes_project 11 28216250 28225269 - MGP_BALBcJ_P0028372 Chac2 protein_coding protein_coding MGP_BALBcJ_T0099289.1 MGP_BALBcJ_G0037325.1 mouse_genomes_project 11 97724181 97724285 - Gm23640 snRNA snRNA MGP_BALBcJ_T0011784.1 MGP_BALBcJ_G0009905.1 mouse_genomes_project 11 115467061 115470839 + MGP_BALBcJ_P0011784 Cdk3-ps polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011785.1 MGP_BALBcJ_G0009905.1 mouse_genomes_project 11 115467544 115468243 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0011786.1 MGP_BALBcJ_G0009905.1 mouse_genomes_project 11 115467598 115471348 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0100531.1 MGP_BALBcJ_G0038567.1 mouse_genomes_project 11 76551060 76551129 - Snord42b snoRNA snoRNA MGP_BALBcJ_T0012683.1 MGP_BALBcJ_G0010780.1 mouse_genomes_project 11 85191670 85192269 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028302.1 MGP_BALBcJ_G0018047.1 mouse_genomes_project 11 26709219 26712494 - MGP_BALBcJ_P0028302 Prorsd1 protein_coding protein_coding MGP_BALBcJ_T0028303.1 MGP_BALBcJ_G0018047.1 mouse_genomes_project 11 26710338 26712496 - MGP_BALBcJ_P0028303 Prorsd1 protein_coding protein_coding MGP_BALBcJ_T0099257.1 MGP_BALBcJ_G0037293.1 mouse_genomes_project 11 67106372 67106456 + Gm25819 snRNA snRNA MGP_BALBcJ_T0009648.1 MGP_BALBcJ_G0007773.1 mouse_genomes_project 11 47320674 47320751 + Gm23813 miRNA miRNA MGP_BALBcJ_T0031087.1 MGP_BALBcJ_G0018751.1 mouse_genomes_project 11 78777924 78796079 - MGP_BALBcJ_P0031087 5730455P16Rik protein_coding protein_coding MGP_BALBcJ_T0031088.1 MGP_BALBcJ_G0018751.1 mouse_genomes_project 11 78777925 78796098 - MGP_BALBcJ_P0031088 5730455P16Rik protein_coding protein_coding MGP_BALBcJ_T0031089.1 MGP_BALBcJ_G0018751.1 mouse_genomes_project 11 78781411 78786489 - 5730455P16Rik protein_coding retained_intron MGP_BALBcJ_T0031090.1 MGP_BALBcJ_G0018751.1 mouse_genomes_project 11 78788478 78796098 - MGP_BALBcJ_P0031090 5730455P16Rik protein_coding protein_coding MGP_BALBcJ_T0030556.1 MGP_BALBcJ_G0018631.1 mouse_genomes_project 11 72600049 72600997 - MGP_BALBcJ_P0030556 Olfr410 protein_coding protein_coding MGP_BALBcJ_T0030656.1 MGP_BALBcJ_G0018655.1 mouse_genomes_project 11 73799424 73802499 + MGP_BALBcJ_P0030656 Rilp protein_coding protein_coding MGP_BALBcJ_T0030657.1 MGP_BALBcJ_G0018655.1 mouse_genomes_project 11 73799797 73802494 + Rilp protein_coding retained_intron MGP_BALBcJ_T0099241.1 MGP_BALBcJ_G0037277.1 mouse_genomes_project 11 32184495 32184602 + Gm25799 snRNA snRNA MGP_BALBcJ_T0003164.1 MGP_BALBcJ_G0002937.1 mouse_genomes_project 11 57699803 57704839 - Gm12264 antisense antisense MGP_BALBcJ_T0003127.1 MGP_BALBcJ_G0002903.1 mouse_genomes_project 11 40520960 40582496 - Gm12146 antisense antisense MGP_BALBcJ_T0029313.1 MGP_BALBcJ_G0018343.1 mouse_genomes_project 11 57512718 57513829 - MGP_BALBcJ_P0029313 Olfr223 protein_coding protein_coding MGP_BALBcJ_T0012594.1 MGP_BALBcJ_G0010691.1 mouse_genomes_project 11 55765256 55765609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032190.1 MGP_BALBcJ_G0019032.1 mouse_genomes_project 11 98237716 98248663 - MGP_BALBcJ_P0032190 Krt28 protein_coding protein_coding MGP_BALBcJ_T0031378.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85059733 85105753 - MGP_BALBcJ_P0031378 Rps6kb1 protein_coding protein_coding MGP_BALBcJ_T0031379.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85062880 85105753 - Rps6kb1 protein_coding retained_intron MGP_BALBcJ_T0031380.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85063446 85072665 - Rps6kb1 protein_coding processed_transcript MGP_BALBcJ_T0031381.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85074637 85081059 - Rps6kb1 protein_coding processed_transcript MGP_BALBcJ_T0031382.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85075002 85105722 - MGP_BALBcJ_P0031382 Rps6kb1 protein_coding protein_coding MGP_BALBcJ_T0031383.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85080663 85093847 - Rps6kb1 protein_coding retained_intron MGP_BALBcJ_T0031384.1 MGP_BALBcJ_G0018830.1 mouse_genomes_project 11 85093778 85105713 - MGP_BALBcJ_P0031384 Rps6kb1 protein_coding protein_coding MGP_BALBcJ_T0029360.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58130559 58152063 - MGP_BALBcJ_P0029360 Srebf1 protein_coding protein_coding MGP_BALBcJ_T0029361.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58131392 58141904 - MGP_BALBcJ_P0029361 Srebf1 protein_coding protein_coding MGP_BALBcJ_T0029362.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58131600 58132511 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029363.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58131933 58141933 - MGP_BALBcJ_P0029363 Srebf1 protein_coding protein_coding MGP_BALBcJ_T0029364.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58132834 58133686 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029365.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58132836 58134095 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029366.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58133271 58135328 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029367.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58134129 58134959 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029368.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58134571 58135761 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029369.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58135659 58137582 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029370.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58137428 58141860 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0029371.1 MGP_BALBcJ_G0018353.1 mouse_genomes_project 11 58138417 58154040 - Srebf1 protein_coding processed_transcript MGP_BALBcJ_T0009732.1 MGP_BALBcJ_G0007857.1 mouse_genomes_project 11 103433634 103433779 - miRNA miRNA MGP_BALBcJ_T0028435.1 MGP_BALBcJ_G0018078.1 mouse_genomes_project 11 29775748 29780749 - MGP_BALBcJ_P0028435 Efcab9 protein_coding protein_coding MGP_BALBcJ_T0028436.1 MGP_BALBcJ_G0018078.1 mouse_genomes_project 11 29776337 29785130 - MGP_BALBcJ_P0028436 Efcab9 protein_coding protein_coding MGP_BALBcJ_T0032510.1 MGP_BALBcJ_G0019147.1 mouse_genomes_project 11 100439286 100446119 + Rnd2 protein_coding processed_transcript MGP_BALBcJ_T0032511.1 MGP_BALBcJ_G0019147.1 mouse_genomes_project 11 100439771 100445371 + Rnd2 protein_coding processed_transcript MGP_BALBcJ_T0032512.1 MGP_BALBcJ_G0019147.1 mouse_genomes_project 11 100442462 100446119 + MGP_BALBcJ_P0032512 Rnd2 protein_coding protein_coding MGP_BALBcJ_T0028898.1 MGP_BALBcJ_G0018210.1 mouse_genomes_project 11 49249976 49255359 + MGP_BALBcJ_P0028898 Nhp2 protein_coding protein_coding MGP_BALBcJ_T0028899.1 MGP_BALBcJ_G0018210.1 mouse_genomes_project 11 49250012 49255074 + Nhp2 protein_coding retained_intron MGP_BALBcJ_T0028543.1 MGP_BALBcJ_G0018109.1 mouse_genomes_project 11 39744552 39957595 + MGP_BALBcJ_P0028543 Gabrb2 protein_coding protein_coding MGP_BALBcJ_T0028544.1 MGP_BALBcJ_G0018109.1 mouse_genomes_project 11 39744559 39747812 + Gabrb2 protein_coding processed_transcript MGP_BALBcJ_T0028545.1 MGP_BALBcJ_G0018109.1 mouse_genomes_project 11 39746452 39812685 + Gabrb2 protein_coding processed_transcript MGP_BALBcJ_T0028546.1 MGP_BALBcJ_G0018109.1 mouse_genomes_project 11 39746483 39857968 + Gabrb2 protein_coding processed_transcript MGP_BALBcJ_T0028547.1 MGP_BALBcJ_G0018109.1 mouse_genomes_project 11 39746523 39955458 + MGP_BALBcJ_P0028547 Gabrb2 protein_coding protein_coding MGP_BALBcJ_T0031422.1 MGP_BALBcJ_G0018842.1 mouse_genomes_project 11 85791154 85924736 - MGP_BALBcJ_P0031422 Ppm1e protein_coding protein_coding MGP_BALBcJ_T0031423.1 MGP_BALBcJ_G0018842.1 mouse_genomes_project 11 85807348 85924350 - Ppm1e protein_coding processed_transcript MGP_BALBcJ_T0006278.1 MGP_BALBcJ_G0005242.1 mouse_genomes_project 11 86681866 86690231 + Gm15892 lincRNA lincRNA MGP_BALBcJ_T0006279.1 MGP_BALBcJ_G0005242.1 mouse_genomes_project 11 86689116 86689779 + Gm15892 lincRNA lincRNA MGP_BALBcJ_T0006280.1 MGP_BALBcJ_G0005242.1 mouse_genomes_project 11 86689176 86690207 + Gm15892 lincRNA lincRNA MGP_BALBcJ_T0028738.1 MGP_BALBcJ_G0018164.1 mouse_genomes_project 11 46840626 46841562 + MGP_BALBcJ_P0028738 Olfr1390 protein_coding protein_coding MGP_BALBcJ_T0009668.1 MGP_BALBcJ_G0007793.1 mouse_genomes_project 11 65140560 65140632 + Mir6923 miRNA miRNA MGP_BALBcJ_T0031126.1 MGP_BALBcJ_G0018761.1 mouse_genomes_project 11 80472398 80474281 + MGP_BALBcJ_P0031126 Ccl2 protein_coding protein_coding MGP_BALBcJ_T0031127.1 MGP_BALBcJ_G0018761.1 mouse_genomes_project 11 80472437 80474278 + Ccl2 protein_coding retained_intron MGP_BALBcJ_T0100552.1 MGP_BALBcJ_G0038588.1 mouse_genomes_project 11 119002581 119002661 + Gm23663 snoRNA snoRNA MGP_BALBcJ_T0030836.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76110560 76214187 + MGP_BALBcJ_P0030836 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030837.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76110604 76169504 + MGP_BALBcJ_P0030837 Myo18a protein_coding unknown_likely_coding MGP_BALBcJ_T0030838.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76110615 76127498 + Myo18a protein_coding retained_intron MGP_BALBcJ_T0030839.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76112917 76124709 + MGP_BALBcJ_P0030839 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030840.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76114050 76214187 + MGP_BALBcJ_P0030840 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030841.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76119468 76214187 + MGP_BALBcJ_P0030841 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030842.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76124567 76214187 + MGP_BALBcJ_P0030842 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030843.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76124567 76214187 + MGP_BALBcJ_P0030843 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030844.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76124595 76213349 + MGP_BALBcJ_P0030844 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030845.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76124595 76213350 + MGP_BALBcJ_P0030845 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030846.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76124618 76213055 + MGP_BALBcJ_P0030846 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030848.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76148976 76214044 + MGP_BALBcJ_P0030848 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030849.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76149015 76160541 + MGP_BALBcJ_P0030849 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030850.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76149028 76214187 + MGP_BALBcJ_P0030850 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030851.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76149028 76213316 + MGP_BALBcJ_P0030851 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030852.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76149053 76213044 + MGP_BALBcJ_P0030852 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030853.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76149053 76213263 + MGP_BALBcJ_P0030853 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030854.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76159486 76214187 + MGP_BALBcJ_P0030854 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030855.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76172499 76175587 + Myo18a protein_coding processed_transcript MGP_BALBcJ_T0030856.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76186045 76189527 + Myo18a protein_coding processed_transcript MGP_BALBcJ_T0030857.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76188891 76192785 + Myo18a protein_coding retained_intron MGP_BALBcJ_T0030858.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76197357 76201667 + Myo18a protein_coding retained_intron MGP_BALBcJ_T0030859.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76198562 76201538 + Myo18a protein_coding retained_intron MGP_BALBcJ_T0030860.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76202076 76207569 + MGP_BALBcJ_P0030860 Myo18a protein_coding protein_coding MGP_BALBcJ_T0030861.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76205691 76213283 + Myo18a protein_coding retained_intron MGP_BALBcJ_T0030862.1 MGP_BALBcJ_G0018695.1 mouse_genomes_project 11 76208493 76213402 + Myo18a protein_coding processed_transcript MGP_BALBcJ_T0029244.1 MGP_BALBcJ_G0018319.1 mouse_genomes_project 11 56773822 56790707 + MGP_BALBcJ_P0029244 2810021J22Rik protein_coding protein_coding MGP_BALBcJ_T0029245.1 MGP_BALBcJ_G0018319.1 mouse_genomes_project 11 56773873 56785425 + MGP_BALBcJ_P0029245 2810021J22Rik protein_coding protein_coding MGP_BALBcJ_T0027741.1 MGP_BALBcJ_G0017919.1 mouse_genomes_project 11 1098837 1128846 + Tbc1d10a protein_coding processed_transcript MGP_BALBcJ_T0027742.1 MGP_BALBcJ_G0017919.1 mouse_genomes_project 11 1098837 1129466 + MGP_BALBcJ_P0027742 Tbc1d10a protein_coding protein_coding MGP_BALBcJ_T0027743.1 MGP_BALBcJ_G0017919.1 mouse_genomes_project 11 1098870 1129463 + MGP_BALBcJ_P0027743 Tbc1d10a protein_coding protein_coding MGP_BALBcJ_T0027744.1 MGP_BALBcJ_G0017919.1 mouse_genomes_project 11 1119383 1123951 + Tbc1d10a protein_coding processed_transcript MGP_BALBcJ_T0027745.1 MGP_BALBcJ_G0017919.1 mouse_genomes_project 11 1126271 1127561 + Tbc1d10a protein_coding processed_transcript MGP_BALBcJ_T0027746.1 MGP_BALBcJ_G0017919.1 mouse_genomes_project 11 1126435 1127817 + Tbc1d10a protein_coding processed_transcript MGP_BALBcJ_T0000845.1 MGP_BALBcJ_G0000777.1 mouse_genomes_project 11 104968191 104969739 + TEC TEC MGP_BALBcJ_T0032849.1 MGP_BALBcJ_G0019208.1 mouse_genomes_project 11 102650638 102651648 + MGP_BALBcJ_P0032849 Rprml protein_coding protein_coding MGP_BALBcJ_T0012471.1 MGP_BALBcJ_G0010568.1 mouse_genomes_project 11 14110032 14110187 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012463.1 MGP_BALBcJ_G0010560.1 mouse_genomes_project 11 11718994 11719591 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031035.1 MGP_BALBcJ_G0018737.1 mouse_genomes_project 11 77913363 77917741 - MGP_BALBcJ_P0031035 Omg protein_coding protein_coding MGP_BALBcJ_T0028863.1 MGP_BALBcJ_G0018203.1 mouse_genomes_project 11 48662461 48674397 + MGP_BALBcJ_P0028863 Zfp354a protein_coding protein_coding MGP_BALBcJ_T0028864.1 MGP_BALBcJ_G0018203.1 mouse_genomes_project 11 48662463 48663276 + Zfp354a protein_coding processed_transcript MGP_BALBcJ_T0028865.1 MGP_BALBcJ_G0018203.1 mouse_genomes_project 11 48662498 48675834 + MGP_BALBcJ_P0028865 Zfp354a protein_coding protein_coding MGP_BALBcJ_T0006148.1 MGP_BALBcJ_G0005136.1 mouse_genomes_project 11 15137621 15145273 + Gm12018 lincRNA lincRNA MGP_BALBcJ_T0006178.1 MGP_BALBcJ_G0005161.1 mouse_genomes_project 11 25927010 25998420 + Gm12082 lincRNA lincRNA MGP_BALBcJ_T0006153.1 MGP_BALBcJ_G0005140.1 mouse_genomes_project 11 16063041 16073962 + 4933406G16Rik lincRNA lincRNA MGP_BALBcJ_T0006354.1 MGP_BALBcJ_G0005298.1 mouse_genomes_project 11 119750297 119752541 - Gm16755 lincRNA lincRNA MGP_BALBcJ_T0031576.1 MGP_BALBcJ_G0018881.1 mouse_genomes_project 11 89302451 89309475 + MGP_BALBcJ_P0031576 Cox11 protein_coding protein_coding MGP_BALBcJ_T0031577.1 MGP_BALBcJ_G0018881.1 mouse_genomes_project 11 89302780 89309096 + MGP_BALBcJ_P0031577 Cox11 protein_coding protein_coding MGP_BALBcJ_T0031728.1 MGP_BALBcJ_G0018915.1 mouse_genomes_project 11 93741040 93757204 + MGP_BALBcJ_P0031728 Samd14 protein_coding protein_coding MGP_BALBcJ_T0031729.1 MGP_BALBcJ_G0018915.1 mouse_genomes_project 11 93741043 93752757 + Samd14 protein_coding processed_transcript MGP_BALBcJ_T0031730.1 MGP_BALBcJ_G0018915.1 mouse_genomes_project 11 93741266 93751233 + MGP_BALBcJ_P0031730 Samd14 protein_coding protein_coding MGP_BALBcJ_T0028980.1 MGP_BALBcJ_G0018232.1 mouse_genomes_project 11 51189681 51195363 + Gdf9 protein_coding processed_transcript MGP_BALBcJ_T0028981.1 MGP_BALBcJ_G0018232.1 mouse_genomes_project 11 51191500 51192439 + Gdf9 protein_coding processed_transcript MGP_BALBcJ_T0028982.1 MGP_BALBcJ_G0018232.1 mouse_genomes_project 11 51191957 51196365 + MGP_BALBcJ_P0028982 Gdf9 protein_coding protein_coding MGP_BALBcJ_T0012742.1 MGP_BALBcJ_G0010839.1 mouse_genomes_project 11 106391742 106392093 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098742.1 MGP_BALBcJ_G0036796.1 mouse_genomes_project 11 115411234 115411361 - Gm26413 scaRNA scaRNA MGP_BALBcJ_T0034043.1 MGP_BALBcJ_G0019457.1 mouse_genomes_project 11 119875860 119876477 + MGP_BALBcJ_P0034043 Npb protein_coding protein_coding MGP_BALBcJ_T0034044.1 MGP_BALBcJ_G0019457.1 mouse_genomes_project 11 119875860 119876477 + MGP_BALBcJ_P0034044 Npb protein_coding protein_coding MGP_BALBcJ_T0034045.1 MGP_BALBcJ_G0019457.1 mouse_genomes_project 11 119875888 119876417 + MGP_BALBcJ_P0034045 Npb protein_coding protein_coding MGP_BALBcJ_T0028684.1 MGP_BALBcJ_G0018148.1 mouse_genomes_project 11 46261070 46283890 - MGP_BALBcJ_P0028684 protein_coding protein_coding MGP_BALBcJ_T0027769.1 MGP_BALBcJ_G0017927.1 mouse_genomes_project 11 1626884 1629244 - MGP_BALBcJ_P0027769 Uqcr10 protein_coding protein_coding MGP_BALBcJ_T0027770.1 MGP_BALBcJ_G0017927.1 mouse_genomes_project 11 1626886 1629236 - Uqcr10 protein_coding processed_transcript MGP_BALBcJ_T0027771.1 MGP_BALBcJ_G0017927.1 mouse_genomes_project 11 1626893 1628955 - Uqcr10 protein_coding processed_transcript MGP_BALBcJ_T0000846.1 MGP_BALBcJ_G0000778.1 mouse_genomes_project 11 119846404 119847572 + TEC TEC MGP_BALBcJ_T0031415.1 MGP_BALBcJ_G0018840.1 mouse_genomes_project 11 85664901 85680214 + MGP_BALBcJ_P0031415 Ska2 protein_coding protein_coding MGP_BALBcJ_T0031416.1 MGP_BALBcJ_G0018840.1 mouse_genomes_project 11 85664918 85680213 + Ska2 protein_coding processed_transcript MGP_BALBcJ_T0031417.1 MGP_BALBcJ_G0018840.1 mouse_genomes_project 11 85671536 85677686 + Ska2 protein_coding processed_transcript MGP_BALBcJ_T0009642.1 MGP_BALBcJ_G0007767.1 mouse_genomes_project 11 33071671 33071757 + Mir103-1 miRNA miRNA MGP_BALBcJ_T0012504.1 MGP_BALBcJ_G0010601.1 mouse_genomes_project 11 20999108 20999367 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029547.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 59962808 60127820 + Specc1 protein_coding retained_intron MGP_BALBcJ_T0029548.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 59962808 60146633 + MGP_BALBcJ_P0029548 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029549.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 59962824 60147085 + MGP_BALBcJ_P0029549 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029550.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 59962855 60053719 + Specc1 protein_coding retained_intron MGP_BALBcJ_T0029551.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 59962860 60228912 + MGP_BALBcJ_P0029551 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029552.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 59984241 60081990 + Specc1 protein_coding processed_transcript MGP_BALBcJ_T0029553.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60013687 60146633 + MGP_BALBcJ_P0029553 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029554.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60027279 60150288 + MGP_BALBcJ_P0029554 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029555.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60027295 60229441 + MGP_BALBcJ_P0029555 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029556.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60037635 60230606 + MGP_BALBcJ_P0029556 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029557.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60037658 60232490 + MGP_BALBcJ_P0029557 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029558.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60085277 60232482 + MGP_BALBcJ_P0029558 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029559.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60085281 60229061 + MGP_BALBcJ_P0029559 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029560.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60085327 60086604 + Specc1 protein_coding retained_intron MGP_BALBcJ_T0029561.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60085341 60146646 + MGP_BALBcJ_P0029561 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029562.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60085373 60147084 + MGP_BALBcJ_P0029562 Specc1 protein_coding protein_coding MGP_BALBcJ_T0029563.1 MGP_BALBcJ_G0018389.1 mouse_genomes_project 11 60085379 60232490 + MGP_BALBcJ_P0029563 Specc1 protein_coding protein_coding MGP_BALBcJ_T0017130.1 MGP_BALBcJ_G0015095.1 mouse_genomes_project 11 19919057 19921395 + 9130230N09Rik processed_transcript processed_transcript MGP_BALBcJ_T0031457.1 MGP_BALBcJ_G0018848.1 mouse_genomes_project 11 86198024 86241383 + MGP_BALBcJ_P0031457 Hsf5 protein_coding protein_coding MGP_BALBcJ_T0006275.1 MGP_BALBcJ_G0005239.1 mouse_genomes_project 11 85629713 85630415 - Gm11479 lincRNA lincRNA MGP_BALBcJ_T0100486.1 MGP_BALBcJ_G0038522.1 mouse_genomes_project 11 4980581 4980656 - Gm24051 snoRNA snoRNA MGP_BALBcJ_T0006320.1 MGP_BALBcJ_G0005272.1 mouse_genomes_project 11 109675062 109677299 + Gm11682 lincRNA lincRNA MGP_BALBcJ_T0012745.1 MGP_BALBcJ_G0010842.1 mouse_genomes_project 11 108101773 108102908 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100521.1 MGP_BALBcJ_G0038557.1 mouse_genomes_project 11 69359227 69359486 - snoRNA snoRNA MGP_BALBcJ_T0030999.1 MGP_BALBcJ_G0018727.1 mouse_genomes_project 11 76910710 76916070 + MGP_BALBcJ_P0030999 Ift20 protein_coding protein_coding MGP_BALBcJ_T0031000.1 MGP_BALBcJ_G0018727.1 mouse_genomes_project 11 76910777 76915726 + MGP_BALBcJ_P0031000 Ift20 protein_coding protein_coding MGP_BALBcJ_T0031001.1 MGP_BALBcJ_G0018727.1 mouse_genomes_project 11 76910792 76915829 + MGP_BALBcJ_P0031001 Ift20 protein_coding protein_coding MGP_BALBcJ_T0031002.1 MGP_BALBcJ_G0018727.1 mouse_genomes_project 11 76910794 76915829 + Ift20 protein_coding retained_intron MGP_BALBcJ_T0031003.1 MGP_BALBcJ_G0018727.1 mouse_genomes_project 11 76910822 76915829 + Ift20 protein_coding retained_intron MGP_BALBcJ_T0030519.1 MGP_BALBcJ_G0018611.1 mouse_genomes_project 11 71896392 71936669 + MGP_BALBcJ_P0030519 Zfp735 protein_coding protein_coding MGP_BALBcJ_T0030520.1 MGP_BALBcJ_G0018611.1 mouse_genomes_project 11 71896413 71933700 + Zfp735 protein_coding processed_transcript MGP_BALBcJ_T0030521.1 MGP_BALBcJ_G0018611.1 mouse_genomes_project 11 71901467 71933632 + Zfp735 protein_coding processed_transcript MGP_BALBcJ_T0028238.1 MGP_BALBcJ_G0018034.1 mouse_genomes_project 11 20936592 20971533 - MGP_BALBcJ_P0028238 Papolg protein_coding protein_coding MGP_BALBcJ_T0028239.1 MGP_BALBcJ_G0018034.1 mouse_genomes_project 11 20939189 20942416 - MGP_BALBcJ_P0028239 Papolg protein_coding protein_coding MGP_BALBcJ_T0028240.1 MGP_BALBcJ_G0018034.1 mouse_genomes_project 11 20940356 20968184 - Papolg protein_coding processed_transcript MGP_BALBcJ_T0028241.1 MGP_BALBcJ_G0018034.1 mouse_genomes_project 11 20944000 20971516 - MGP_BALBcJ_P0028241 Papolg protein_coding protein_coding MGP_BALBcJ_T0012601.1 MGP_BALBcJ_G0010698.1 mouse_genomes_project 11 56862572 56863037 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017197.1 MGP_BALBcJ_G0015132.1 mouse_genomes_project 11 94609702 94611876 + 4833417C18Rik processed_transcript processed_transcript MGP_BALBcJ_T0027809.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1984059 1995307 - Gas2l1 protein_coding processed_transcript MGP_BALBcJ_T0027810.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1985420 1995313 - MGP_BALBcJ_P0027810 Gas2l1 protein_coding protein_coding MGP_BALBcJ_T0027813.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1990384 1995340 - MGP_BALBcJ_P0027813 Gas2l1 protein_coding protein_coding MGP_BALBcJ_T0027814.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1990393 1995290 - MGP_BALBcJ_P0027814 Gas2l1 protein_coding protein_coding MGP_BALBcJ_T0027815.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1990482 1994864 - Gas2l1 protein_coding processed_transcript MGP_BALBcJ_T0027816.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1993885 1995291 - MGP_BALBcJ_P0027816 Gas2l1 protein_coding protein_coding MGP_BALBcJ_T0027817.1 MGP_BALBcJ_G0017935.1 mouse_genomes_project 11 1994429 1995307 - Gas2l1 protein_coding processed_transcript MGP_BALBcJ_T0012613.1 MGP_BALBcJ_G0010710.1 mouse_genomes_project 11 59420167 59420581 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033249.1 MGP_BALBcJ_G0019297.1 mouse_genomes_project 11 112955536 113244197 - MGP_BALBcJ_P0033249 Sdk2 protein_coding protein_coding MGP_BALBcJ_T0033250.1 MGP_BALBcJ_G0019297.1 mouse_genomes_project 11 112973008 112990043 - Sdk2 protein_coding processed_transcript MGP_BALBcJ_T0033251.1 MGP_BALBcJ_G0019297.1 mouse_genomes_project 11 112985769 113006531 - Sdk2 protein_coding processed_transcript MGP_BALBcJ_T0033252.1 MGP_BALBcJ_G0019297.1 mouse_genomes_project 11 113030097 113243954 - MGP_BALBcJ_P0033252 Sdk2 protein_coding protein_coding MGP_BALBcJ_T0033253.1 MGP_BALBcJ_G0019297.1 mouse_genomes_project 11 113047125 113245012 - Sdk2 protein_coding processed_transcript MGP_BALBcJ_T0033254.1 MGP_BALBcJ_G0019297.1 mouse_genomes_project 11 113117856 113244995 - Sdk2 protein_coding processed_transcript MGP_BALBcJ_T0033181.1 MGP_BALBcJ_G0019281.1 mouse_genomes_project 11 108892951 108934702 - MGP_BALBcJ_P0033181 1700012B07Rik protein_coding protein_coding MGP_BALBcJ_T0033182.1 MGP_BALBcJ_G0019281.1 mouse_genomes_project 11 108896844 108934678 - MGP_BALBcJ_P0033182 1700012B07Rik protein_coding protein_coding MGP_BALBcJ_T0033183.1 MGP_BALBcJ_G0019281.1 mouse_genomes_project 11 108896885 108919280 - MGP_BALBcJ_P0033183 1700012B07Rik protein_coding protein_coding MGP_BALBcJ_T0017212.1 MGP_BALBcJ_G0015141.1 mouse_genomes_project 11 96919928 96920896 - Gm11632 processed_transcript processed_transcript MGP_BALBcJ_T0029649.1 MGP_BALBcJ_G0018407.1 mouse_genomes_project 11 61085586 61119537 + MGP_BALBcJ_P0029649 Tekt3 protein_coding protein_coding MGP_BALBcJ_T0003188.1 MGP_BALBcJ_G0002957.1 mouse_genomes_project 11 62102905 62106673 + 2810001G20Rik antisense antisense MGP_BALBcJ_T0003189.1 MGP_BALBcJ_G0002957.1 mouse_genomes_project 11 62103003 62106673 + 2810001G20Rik antisense antisense MGP_BALBcJ_T0011279.1 MGP_BALBcJ_G0009404.1 mouse_genomes_project 11 55790745 55791016 + Gm26025 misc_RNA misc_RNA MGP_BALBcJ_T0029713.1 MGP_BALBcJ_G0018426.1 mouse_genomes_project 11 65209721 65236260 + MGP_BALBcJ_P0029713 Myh2 protein_coding protein_coding MGP_BALBcJ_T0029714.1 MGP_BALBcJ_G0018426.1 mouse_genomes_project 11 65209760 65213319 + Myh2 protein_coding retained_intron MGP_BALBcJ_T0029715.1 MGP_BALBcJ_G0018426.1 mouse_genomes_project 11 65209914 65236257 + MGP_BALBcJ_P0029715 Myh2 protein_coding protein_coding MGP_BALBcJ_T0028614.1 MGP_BALBcJ_G0018127.1 mouse_genomes_project 11 43279095 43287769 - MGP_BALBcJ_P0028614 Thg1l protein_coding protein_coding MGP_BALBcJ_T0028615.1 MGP_BALBcJ_G0018127.1 mouse_genomes_project 11 43279095 43287463 - MGP_BALBcJ_P0028615 Thg1l protein_coding protein_coding MGP_BALBcJ_T0028616.1 MGP_BALBcJ_G0018127.1 mouse_genomes_project 11 43282466 43286691 - Thg1l protein_coding processed_transcript MGP_BALBcJ_T0028617.1 MGP_BALBcJ_G0018127.1 mouse_genomes_project 11 43283448 43287432 - Thg1l protein_coding processed_transcript MGP_BALBcJ_T0028618.1 MGP_BALBcJ_G0018127.1 mouse_genomes_project 11 43286541 43287758 - Thg1l protein_coding processed_transcript MGP_BALBcJ_T0012676.1 MGP_BALBcJ_G0010773.1 mouse_genomes_project 11 82327666 82328284 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030935.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76632175 76634463 + 2610507B11Rik protein_coding processed_transcript MGP_BALBcJ_T0030936.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76632273 76661680 + MGP_BALBcJ_P0030936 2610507B11Rik protein_coding protein_coding MGP_BALBcJ_T0030937.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76632902 76634397 + 2610507B11Rik protein_coding retained_intron MGP_BALBcJ_T0030938.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76636563 76638618 + 2610507B11Rik protein_coding retained_intron MGP_BALBcJ_T0030939.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76642412 76643866 + 2610507B11Rik protein_coding retained_intron MGP_BALBcJ_T0030940.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76643592 76645329 + MGP_BALBcJ_P0030940 2610507B11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030941.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76655951 76658466 + 2610507B11Rik protein_coding retained_intron MGP_BALBcJ_T0030942.1 MGP_BALBcJ_G0018712.1 mouse_genomes_project 11 76658422 76660197 + 2610507B11Rik protein_coding retained_intron MGP_BALBcJ_T0100515.1 MGP_BALBcJ_G0038551.1 mouse_genomes_project 11 60619935 60620007 + Snord65 snoRNA snoRNA MGP_BALBcJ_T0033135.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108010645 108042075 + MGP_BALBcJ_P0033135 Axin2 protein_coding protein_coding MGP_BALBcJ_T0033136.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108011096 108013887 + MGP_BALBcJ_P0033136 Axin2 protein_coding protein_coding MGP_BALBcJ_T0033137.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108011632 108013902 + MGP_BALBcJ_P0033137 Axin2 protein_coding protein_coding MGP_BALBcJ_T0033138.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108011944 108013798 + MGP_BALBcJ_P0033138 Axin2 protein_coding protein_coding MGP_BALBcJ_T0033139.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108013484 108040803 + MGP_BALBcJ_P0033139 Axin2 protein_coding protein_coding MGP_BALBcJ_T0033140.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108029987 108033671 + Axin2 protein_coding processed_transcript MGP_BALBcJ_T0033141.1 MGP_BALBcJ_G0019270.1 mouse_genomes_project 11 108034912 108042075 + Axin2 protein_coding processed_transcript MGP_BALBcJ_T0031817.1 MGP_BALBcJ_G0018939.1 mouse_genomes_project 11 94863453 94877710 - MGP_BALBcJ_P0031817 Calcoco2 protein_coding protein_coding MGP_BALBcJ_T0031818.1 MGP_BALBcJ_G0018939.1 mouse_genomes_project 11 94863989 94877708 - MGP_BALBcJ_P0031818 Calcoco2 protein_coding protein_coding MGP_BALBcJ_T0003162.1 MGP_BALBcJ_G0002935.1 mouse_genomes_project 11 56811789 56813577 + Gm12257 antisense antisense MGP_BALBcJ_T0017160.1 MGP_BALBcJ_G0015112.1 mouse_genomes_project 11 57649923 57664161 - 1700007J10Rik processed_transcript processed_transcript MGP_BALBcJ_T0017161.1 MGP_BALBcJ_G0015112.1 mouse_genomes_project 11 57649923 57656779 - 1700007J10Rik processed_transcript processed_transcript MGP_BALBcJ_T0027737.1 MGP_BALBcJ_G0017918.1 mouse_genomes_project 11 1072700 1094884 + MGP_BALBcJ_P0027737 Sf3a1 protein_coding protein_coding MGP_BALBcJ_T0027738.1 MGP_BALBcJ_G0017918.1 mouse_genomes_project 11 1072705 1085453 + Sf3a1 protein_coding processed_transcript MGP_BALBcJ_T0027739.1 MGP_BALBcJ_G0017918.1 mouse_genomes_project 11 1072705 1084268 + Sf3a1 protein_coding retained_intron MGP_BALBcJ_T0027740.1 MGP_BALBcJ_G0017918.1 mouse_genomes_project 11 1089890 1091762 + Sf3a1 protein_coding retained_intron MGP_BALBcJ_T0031128.1 MGP_BALBcJ_G0018762.1 mouse_genomes_project 11 80482519 80484333 + MGP_BALBcJ_P0031128 Ccl7 protein_coding protein_coding MGP_BALBcJ_T0028772.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47682101 47723584 + MGP_BALBcJ_P0028772 Tbc1d9b protein_coding protein_coding MGP_BALBcJ_T0028773.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47682101 47724339 + MGP_BALBcJ_P0028773 Tbc1d9b protein_coding protein_coding MGP_BALBcJ_T0028774.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47682107 47691171 + Tbc1d9b protein_coding processed_transcript MGP_BALBcJ_T0028775.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47686139 47691281 + Tbc1d9b protein_coding processed_transcript MGP_BALBcJ_T0028776.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47696222 47701598 + Tbc1d9b protein_coding processed_transcript MGP_BALBcJ_T0028777.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47697611 47702833 + Tbc1d9b protein_coding processed_transcript MGP_BALBcJ_T0028778.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47699523 47701357 + Tbc1d9b protein_coding processed_transcript MGP_BALBcJ_T0028779.1 MGP_BALBcJ_G0018179.1 mouse_genomes_project 11 47713048 47715481 + Tbc1d9b protein_coding processed_transcript MGP_BALBcJ_T0032281.1 MGP_BALBcJ_G0019096.1 mouse_genomes_project 11 99343924 99353038 + MGP_BALBcJ_P0032281 Fkbp10 protein_coding protein_coding MGP_BALBcJ_T0032282.1 MGP_BALBcJ_G0019096.1 mouse_genomes_project 11 99343993 99352326 + MGP_BALBcJ_P0032282 Fkbp10 protein_coding protein_coding MGP_BALBcJ_T0032283.1 MGP_BALBcJ_G0019096.1 mouse_genomes_project 11 99344072 99350303 + MGP_BALBcJ_P0032283 Fkbp10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032284.1 MGP_BALBcJ_G0019096.1 mouse_genomes_project 11 99348637 99349910 + Fkbp10 protein_coding retained_intron MGP_BALBcJ_T0032287.1 MGP_BALBcJ_G0019096.1 mouse_genomes_project 11 99351251 99352514 + Fkbp10 protein_coding retained_intron MGP_BALBcJ_T0034046.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119877470 119885319 - MGP_BALBcJ_P0034046 Pcyt2 protein_coding protein_coding MGP_BALBcJ_T0034047.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119877834 119885308 - MGP_BALBcJ_P0034047 Pcyt2 protein_coding protein_coding MGP_BALBcJ_T0034048.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119878055 119879493 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034049.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119878259 119879465 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034050.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119879011 119880458 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034051.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119879588 119885291 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034052.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119879979 119881078 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034053.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119880318 119880972 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034054.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119880360 119881908 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034055.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119880413 119885296 - Pcyt2 protein_coding processed_transcript MGP_BALBcJ_T0034056.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119882558 119885293 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0034057.1 MGP_BALBcJ_G0019458.1 mouse_genomes_project 11 119882829 119885252 - Pcyt2 protein_coding retained_intron MGP_BALBcJ_T0098310.1 MGP_BALBcJ_G0036364.1 mouse_genomes_project 11 68701376 68701954 - pseudogene pseudogene MGP_BALBcJ_T0033930.1 MGP_BALBcJ_G0019432.1 mouse_genomes_project 11 119324072 119346820 - MGP_BALBcJ_P0033930 Cep131 protein_coding protein_coding MGP_BALBcJ_T0033931.1 MGP_BALBcJ_G0019432.1 mouse_genomes_project 11 119324076 119324611 - Cep131 protein_coding processed_transcript MGP_BALBcJ_T0033932.1 MGP_BALBcJ_G0019432.1 mouse_genomes_project 11 119324281 119327712 - Cep131 protein_coding processed_transcript MGP_BALBcJ_T0033933.1 MGP_BALBcJ_G0019432.1 mouse_genomes_project 11 119326787 119330584 - Cep131 protein_coding processed_transcript MGP_BALBcJ_T0033934.1 MGP_BALBcJ_G0019432.1 mouse_genomes_project 11 119327743 119331699 - Cep131 protein_coding processed_transcript MGP_BALBcJ_T0009728.1 MGP_BALBcJ_G0007853.1 mouse_genomes_project 11 101414808 101414876 - Mir6930 miRNA miRNA MGP_BALBcJ_T0033913.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119200447 119260626 + MGP_BALBcJ_P0033913 Baiap2 protein_coding protein_coding MGP_BALBcJ_T0033914.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119200447 119264787 + MGP_BALBcJ_P0033914 Baiap2 protein_coding protein_coding MGP_BALBcJ_T0033915.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119200447 119264787 + MGP_BALBcJ_P0033915 Baiap2 protein_coding protein_coding MGP_BALBcJ_T0033916.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119200447 119260626 + MGP_BALBcJ_P0033916 Baiap2 protein_coding protein_coding MGP_BALBcJ_T0033917.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119200447 119260626 + MGP_BALBcJ_P0033917 Baiap2 protein_coding protein_coding MGP_BALBcJ_T0033918.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119200800 119218216 + Baiap2 protein_coding processed_transcript MGP_BALBcJ_T0033919.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119201156 119239112 + Baiap2 protein_coding processed_transcript MGP_BALBcJ_T0033920.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119217704 119218071 + Baiap2 protein_coding processed_transcript MGP_BALBcJ_T0033921.1 MGP_BALBcJ_G0019430.1 mouse_genomes_project 11 119255675 119260204 + Baiap2 protein_coding processed_transcript MGP_BALBcJ_T0027917.1 MGP_BALBcJ_G0017959.1 mouse_genomes_project 11 3221856 3230699 - MGP_BALBcJ_P0027917 Ddx56 protein_coding protein_coding MGP_BALBcJ_T0027918.1 MGP_BALBcJ_G0017959.1 mouse_genomes_project 11 3228233 3229319 - Ddx56 protein_coding retained_intron MGP_BALBcJ_T0027919.1 MGP_BALBcJ_G0017959.1 mouse_genomes_project 11 3228563 3230699 - MGP_BALBcJ_P0027919 Ddx56 protein_coding protein_coding MGP_BALBcJ_T0027920.1 MGP_BALBcJ_G0017959.1 mouse_genomes_project 11 3229972 3230673 - Ddx56 protein_coding retained_intron MGP_BALBcJ_T0102165.1 MGP_BALBcJ_G0039982.1 mouse_genomes_project 11 98870594 98871011 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012530.1 MGP_BALBcJ_G0010627.1 mouse_genomes_project 11 28347093 28347872 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000843.1 MGP_BALBcJ_G0000775.1 mouse_genomes_project 11 82728445 82730763 + TEC TEC MGP_BALBcJ_T0000840.1 MGP_BALBcJ_G0000772.1 mouse_genomes_project 11 41976726 41983089 - TEC TEC MGP_BALBcJ_T0012483.1 MGP_BALBcJ_G0010580.1 mouse_genomes_project 11 17174038 17174261 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017143.1 MGP_BALBcJ_G0015103.1 mouse_genomes_project 11 43139145 43174205 + F630206G17Rik processed_transcript processed_transcript MGP_BALBcJ_T0030557.1 MGP_BALBcJ_G0018632.1 mouse_genomes_project 11 72613179 72614228 - MGP_BALBcJ_P0030557 Olfr411 protein_coding protein_coding MGP_BALBcJ_T0030558.1 MGP_BALBcJ_G0018632.1 mouse_genomes_project 11 72613447 72619175 - MGP_BALBcJ_P0030558 Olfr411 protein_coding protein_coding MGP_BALBcJ_T0006255.1 MGP_BALBcJ_G0005227.1 mouse_genomes_project 11 76261014 76278193 - Gm11190 lincRNA lincRNA MGP_BALBcJ_T0032410.1 MGP_BALBcJ_G0019123.1 mouse_genomes_project 11 100048107 100071448 - Fam134c protein_coding processed_transcript MGP_BALBcJ_T0032411.1 MGP_BALBcJ_G0019123.1 mouse_genomes_project 11 100048298 100071448 - MGP_BALBcJ_P0032411 Fam134c protein_coding protein_coding MGP_BALBcJ_T0032412.1 MGP_BALBcJ_G0019123.1 mouse_genomes_project 11 100048304 100071262 - MGP_BALBcJ_P0032412 Fam134c protein_coding protein_coding MGP_BALBcJ_T0032413.1 MGP_BALBcJ_G0019123.1 mouse_genomes_project 11 100049785 100071320 - Fam134c protein_coding processed_transcript MGP_BALBcJ_T0032414.1 MGP_BALBcJ_G0019123.1 mouse_genomes_project 11 100050368 100071448 - Fam134c protein_coding processed_transcript MGP_BALBcJ_T0031805.1 MGP_BALBcJ_G0018935.1 mouse_genomes_project 11 94786988 94793229 + MGP_BALBcJ_P0031805 Gip protein_coding protein_coding MGP_BALBcJ_T0031806.1 MGP_BALBcJ_G0018935.1 mouse_genomes_project 11 94787489 94793229 + MGP_BALBcJ_P0031806 Gip protein_coding protein_coding MGP_BALBcJ_T0012436.1 MGP_BALBcJ_G0010533.1 mouse_genomes_project 11 2449404 2449659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033592.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115539558 115559073 - Exoc7 protein_coding processed_transcript MGP_BALBcJ_T0033593.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115539558 115559073 - MGP_BALBcJ_P0033593 Exoc7 protein_coding protein_coding MGP_BALBcJ_T0033594.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115539558 115559073 - MGP_BALBcJ_P0033594 Exoc7 protein_coding protein_coding MGP_BALBcJ_T0033595.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115539558 115559073 - MGP_BALBcJ_P0033595 Exoc7 protein_coding protein_coding MGP_BALBcJ_T0033596.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115540620 115542026 - Exoc7 protein_coding processed_transcript MGP_BALBcJ_T0033597.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115540666 115543016 - Exoc7 protein_coding processed_transcript MGP_BALBcJ_T0033598.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115544117 115549348 - Exoc7 protein_coding processed_transcript MGP_BALBcJ_T0033599.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115547261 115558991 - MGP_BALBcJ_P0033599 Exoc7 protein_coding protein_coding MGP_BALBcJ_T0033600.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115556952 115559066 - MGP_BALBcJ_P0033600 Exoc7 protein_coding protein_coding MGP_BALBcJ_T0033601.1 MGP_BALBcJ_G0019366.1 mouse_genomes_project 11 115557371 115559571 - MGP_BALBcJ_P0033601 Exoc7 protein_coding protein_coding MGP_BALBcJ_T0012535.1 MGP_BALBcJ_G0010632.1 mouse_genomes_project 11 30433201 30433648 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012527.1 MGP_BALBcJ_G0010624.1 mouse_genomes_project 11 28062243 28062605 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009710.1 MGP_BALBcJ_G0007835.1 mouse_genomes_project 11 95045366 95045468 + Mir196a-1 miRNA miRNA MGP_BALBcJ_T0034153.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120230620 120240932 + MGP_BALBcJ_P0034153 Slc16a3 protein_coding protein_coding MGP_BALBcJ_T0034154.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120231193 120238904 + MGP_BALBcJ_P0034154 Slc16a3 protein_coding protein_coding MGP_BALBcJ_T0034155.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120231207 120241157 + MGP_BALBcJ_P0034155 Slc16a3 protein_coding protein_coding MGP_BALBcJ_T0034156.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120231211 120239018 + MGP_BALBcJ_P0034156 Slc16a3 protein_coding protein_coding MGP_BALBcJ_T0034157.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120231221 120243032 + MGP_BALBcJ_P0034157 Slc16a3 protein_coding protein_coding MGP_BALBcJ_T0034158.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120232828 120237429 + MGP_BALBcJ_P0034158 Slc16a3 protein_coding protein_coding MGP_BALBcJ_T0034159.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120233278 120236368 + Slc16a3 protein_coding processed_transcript MGP_BALBcJ_T0034160.1 MGP_BALBcJ_G0019475.1 mouse_genomes_project 11 120237381 120238388 + Slc16a3 protein_coding retained_intron MGP_BALBcJ_T0030478.1 MGP_BALBcJ_G0018594.1 mouse_genomes_project 11 71383373 71384892 - MGP_BALBcJ_P0030478 Emc6 protein_coding protein_coding MGP_BALBcJ_T0030479.1 MGP_BALBcJ_G0018594.1 mouse_genomes_project 11 71384190 71384857 - MGP_BALBcJ_P0030479 Emc6 protein_coding protein_coding MGP_BALBcJ_T0003232.1 MGP_BALBcJ_G0002992.1 mouse_genomes_project 11 84757571 84767696 + Brip1os antisense antisense MGP_BALBcJ_T0003233.1 MGP_BALBcJ_G0002992.1 mouse_genomes_project 11 84757584 84862023 + Brip1os antisense antisense MGP_BALBcJ_T0012705.1 MGP_BALBcJ_G0010802.1 mouse_genomes_project 11 95661905 95662712 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099267.1 MGP_BALBcJ_G0037303.1 mouse_genomes_project 11 77218882 77218969 + Gm23219 snRNA snRNA MGP_BALBcJ_T0099234.1 MGP_BALBcJ_G0037270.1 mouse_genomes_project 11 17229970 17230073 - Gm26253 snRNA snRNA MGP_BALBcJ_T0032264.1 MGP_BALBcJ_G0019092.1 mouse_genomes_project 11 99264058 99266648 + MGP_BALBcJ_P0032264 Gast protein_coding protein_coding MGP_BALBcJ_T0033076.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106079278 106176659 - MGP_BALBcJ_P0033076 Bptf protein_coding unknown_likely_coding MGP_BALBcJ_T0033077.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106079279 106176985 - MGP_BALBcJ_P0033077 Bptf protein_coding protein_coding MGP_BALBcJ_T0033078.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106079281 106177449 - MGP_BALBcJ_P0033078 Bptf protein_coding protein_coding MGP_BALBcJ_T0033079.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106079281 106177449 - MGP_BALBcJ_P0033079 Bptf protein_coding protein_coding MGP_BALBcJ_T0033080.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106081702 106089890 - Bptf protein_coding processed_transcript MGP_BALBcJ_T0033081.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106089233 106093472 - Bptf protein_coding processed_transcript MGP_BALBcJ_T0033082.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106092862 106096923 - MGP_BALBcJ_P0033082 Bptf protein_coding protein_coding MGP_BALBcJ_T0033083.1 MGP_BALBcJ_G0019259.1 mouse_genomes_project 11 106104480 106111360 - MGP_BALBcJ_P0033083 Bptf protein_coding protein_coding MGP_BALBcJ_T0033381.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114684030 114703530 + MGP_BALBcJ_P0033381 Slc16a5 protein_coding protein_coding MGP_BALBcJ_T0033382.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114684062 114698486 + MGP_BALBcJ_P0033382 Slc16a5 protein_coding protein_coding MGP_BALBcJ_T0033383.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114684120 114698591 + Slc16a5 protein_coding processed_transcript MGP_BALBcJ_T0033384.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114684165 114702053 + MGP_BALBcJ_P0033384 Slc16a5 protein_coding protein_coding MGP_BALBcJ_T0033385.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114685356 114703530 + Slc16a5 protein_coding processed_transcript MGP_BALBcJ_T0033386.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114685371 114694174 + Slc16a5 protein_coding processed_transcript MGP_BALBcJ_T0033387.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114685374 114698591 + Slc16a5 protein_coding processed_transcript MGP_BALBcJ_T0033388.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114685380 114698535 + Slc16a5 protein_coding processed_transcript MGP_BALBcJ_T0033389.1 MGP_BALBcJ_G0019331.1 mouse_genomes_project 11 114693725 114702738 + Slc16a5 protein_coding retained_intron MGP_BALBcJ_T0012486.1 MGP_BALBcJ_G0010583.1 mouse_genomes_project 11 17616839 17617462 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003267.1 MGP_BALBcJ_G0003019.1 mouse_genomes_project 11 97651059 97663452 - Gm12359 antisense antisense MGP_BALBcJ_T0003268.1 MGP_BALBcJ_G0003019.1 mouse_genomes_project 11 97651661 97663452 - Gm12359 antisense antisense MGP_BALBcJ_T0003269.1 MGP_BALBcJ_G0003019.1 mouse_genomes_project 11 97658009 97663423 - Gm12359 antisense antisense MGP_BALBcJ_T0031375.1 MGP_BALBcJ_G0018829.1 mouse_genomes_project 11 85045217 85059888 + MGP_BALBcJ_P0031375 Rnft1 protein_coding protein_coding MGP_BALBcJ_T0031376.1 MGP_BALBcJ_G0018829.1 mouse_genomes_project 11 85045245 85051345 + Rnft1 protein_coding processed_transcript MGP_BALBcJ_T0031377.1 MGP_BALBcJ_G0018829.1 mouse_genomes_project 11 85045290 85046666 + Rnft1 protein_coding processed_transcript MGP_BALBcJ_T0017128.1 MGP_BALBcJ_G0015093.1 mouse_genomes_project 11 18413944 18417701 + Gm12043 processed_transcript processed_transcript MGP_BALBcJ_T0031058.1 MGP_BALBcJ_G0018744.1 mouse_genomes_project 11 78455009 78490489 - MGP_BALBcJ_P0031058 Crlf3 protein_coding protein_coding MGP_BALBcJ_T0031059.1 MGP_BALBcJ_G0018744.1 mouse_genomes_project 11 78456000 78490506 - MGP_BALBcJ_P0031059 Crlf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031060.1 MGP_BALBcJ_G0018744.1 mouse_genomes_project 11 78456000 78490489 - MGP_BALBcJ_P0031060 Crlf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031061.1 MGP_BALBcJ_G0018744.1 mouse_genomes_project 11 78464599 78490513 - Crlf3 protein_coding processed_transcript MGP_BALBcJ_T0031062.1 MGP_BALBcJ_G0018744.1 mouse_genomes_project 11 78464721 78466404 - Crlf3 protein_coding retained_intron MGP_BALBcJ_T0031063.1 MGP_BALBcJ_G0018744.1 mouse_genomes_project 11 78467816 78490438 - MGP_BALBcJ_P0031063 Crlf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031813.1 MGP_BALBcJ_G0018938.1 mouse_genomes_project 11 94832778 94839595 - MGP_BALBcJ_P0031813 Atp5g1 protein_coding protein_coding MGP_BALBcJ_T0031814.1 MGP_BALBcJ_G0018938.1 mouse_genomes_project 11 94832793 94838961 - MGP_BALBcJ_P0031814 Atp5g1 protein_coding protein_coding MGP_BALBcJ_T0031815.1 MGP_BALBcJ_G0018938.1 mouse_genomes_project 11 94836913 94839506 - MGP_BALBcJ_P0031815 Atp5g1 protein_coding protein_coding MGP_BALBcJ_T0031816.1 MGP_BALBcJ_G0018938.1 mouse_genomes_project 11 94836916 94839544 - MGP_BALBcJ_P0031816 Atp5g1 protein_coding protein_coding MGP_BALBcJ_T0031551.1 MGP_BALBcJ_G0018873.1 mouse_genomes_project 11 87954114 87955767 - MGP_BALBcJ_P0031551 Nog protein_coding protein_coding MGP_BALBcJ_T0006252.1 MGP_BALBcJ_G0005224.1 mouse_genomes_project 11 74046406 74062531 - Gm26836 lincRNA lincRNA MGP_BALBcJ_T0032224.1 MGP_BALBcJ_G0019064.1 mouse_genomes_project 11 98769059 98769843 - MGP_BALBcJ_P0032224 Krtap4-16 protein_coding protein_coding MGP_BALBcJ_T0009652.1 MGP_BALBcJ_G0007777.1 mouse_genomes_project 11 47911062 47911157 - Mir804 miRNA miRNA MGP_BALBcJ_T0012684.1 MGP_BALBcJ_G0010781.1 mouse_genomes_project 11 85634245 85634716 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012687.1 MGP_BALBcJ_G0010784.1 mouse_genomes_project 11 86535926 86536099 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009665.1 MGP_BALBcJ_G0007790.1 mouse_genomes_project 11 62611442 62611588 - Gm24275 miRNA miRNA MGP_BALBcJ_T0034069.1 MGP_BALBcJ_G0019460.1 mouse_genomes_project 11 119892500 119900954 - MGP_BALBcJ_P0034069 Mafg protein_coding protein_coding MGP_BALBcJ_T0034070.1 MGP_BALBcJ_G0019460.1 mouse_genomes_project 11 119896390 119898181 - MGP_BALBcJ_P0034070 Mafg protein_coding protein_coding MGP_BALBcJ_T0034071.1 MGP_BALBcJ_G0019460.1 mouse_genomes_project 11 119896524 119898020 - MGP_BALBcJ_P0034071 Mafg protein_coding protein_coding MGP_BALBcJ_T0034072.1 MGP_BALBcJ_G0019460.1 mouse_genomes_project 11 119896615 119897532 - MGP_BALBcJ_P0034072 Mafg protein_coding protein_coding MGP_BALBcJ_T0034073.1 MGP_BALBcJ_G0019460.1 mouse_genomes_project 11 119898607 119900910 - Mafg protein_coding processed_transcript MGP_BALBcJ_T0028867.1 MGP_BALBcJ_G0018205.1 mouse_genomes_project 11 48884200 48894039 - MGP_BALBcJ_P0028867 BC049762 protein_coding protein_coding MGP_BALBcJ_T0028868.1 MGP_BALBcJ_G0018205.1 mouse_genomes_project 11 48884200 48894134 - MGP_BALBcJ_P0028868 BC049762 protein_coding protein_coding MGP_BALBcJ_T0011289.1 MGP_BALBcJ_G0009414.1 mouse_genomes_project 11 94969854 94969934 - Gm27898 misc_RNA misc_RNA MGP_BALBcJ_T0032478.1 MGP_BALBcJ_G0019136.1 mouse_genomes_project 11 100270155 100273951 + MGP_BALBcJ_P0032478 Psme3 protein_coding protein_coding MGP_BALBcJ_T0032479.1 MGP_BALBcJ_G0019136.1 mouse_genomes_project 11 100270155 100277476 + MGP_BALBcJ_P0032479 Psme3 protein_coding protein_coding MGP_BALBcJ_T0032480.1 MGP_BALBcJ_G0019136.1 mouse_genomes_project 11 100270919 100274537 + MGP_BALBcJ_P0032480 Psme3 protein_coding protein_coding MGP_BALBcJ_T0032481.1 MGP_BALBcJ_G0019136.1 mouse_genomes_project 11 100270965 100273967 + Psme3 protein_coding processed_transcript MGP_BALBcJ_T0032482.1 MGP_BALBcJ_G0019136.1 mouse_genomes_project 11 100273776 100276038 + Psme3 protein_coding processed_transcript MGP_BALBcJ_T0027874.1 MGP_BALBcJ_G0017948.1 mouse_genomes_project 11 2761989 2764082 - MGP_BALBcJ_P0027874 Pgam2 protein_coding protein_coding MGP_BALBcJ_T0027700.1 MGP_BALBcJ_G0017910.1 mouse_genomes_project 11 865012 882011 + MGP_BALBcJ_P0027700 Pes1 protein_coding protein_coding MGP_BALBcJ_T0027701.1 MGP_BALBcJ_G0017910.1 mouse_genomes_project 11 865046 873032 + Pes1 protein_coding processed_transcript MGP_BALBcJ_T0027702.1 MGP_BALBcJ_G0017910.1 mouse_genomes_project 11 865086 879081 + Pes1 protein_coding processed_transcript MGP_BALBcJ_T0100505.1 MGP_BALBcJ_G0038541.1 mouse_genomes_project 11 46139783 46139864 + Snord96a snoRNA snoRNA MGP_BALBcJ_T0029394.1 MGP_BALBcJ_G0018357.1 mouse_genomes_project 11 58350866 58384591 + MGP_BALBcJ_P0029394 Gid4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029395.1 MGP_BALBcJ_G0018357.1 mouse_genomes_project 11 58350983 58378941 + MGP_BALBcJ_P0029395 Gid4 protein_coding protein_coding MGP_BALBcJ_T0031305.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83431530 83462716 + MGP_BALBcJ_P0031305 Myo19 protein_coding protein_coding MGP_BALBcJ_T0031306.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83431552 83434374 + Myo19 protein_coding processed_transcript MGP_BALBcJ_T0031307.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83431602 83462612 + Myo19 protein_coding processed_transcript MGP_BALBcJ_T0031308.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83431692 83432386 + Myo19 protein_coding processed_transcript MGP_BALBcJ_T0031309.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83431735 83462621 + Myo19 protein_coding processed_transcript MGP_BALBcJ_T0031310.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83431749 83444900 + MGP_BALBcJ_P0031310 Myo19 protein_coding protein_coding MGP_BALBcJ_T0031311.1 MGP_BALBcJ_G0018815.1 mouse_genomes_project 11 83433968 83462612 + Myo19 protein_coding processed_transcript MGP_BALBcJ_T0009627.1 MGP_BALBcJ_G0007752.1 mouse_genomes_project 11 3374859 3374923 + Mir7651 miRNA miRNA MGP_BALBcJ_T0032890.1 MGP_BALBcJ_G0019218.1 mouse_genomes_project 11 103513857 103562106 - MGP_BALBcJ_P0032890 Cdc27 protein_coding protein_coding MGP_BALBcJ_T0032891.1 MGP_BALBcJ_G0019218.1 mouse_genomes_project 11 103516052 103562015 - MGP_BALBcJ_P0032891 Cdc27 protein_coding protein_coding MGP_BALBcJ_T0032892.1 MGP_BALBcJ_G0019218.1 mouse_genomes_project 11 103519462 103524390 - Cdc27 protein_coding processed_transcript MGP_BALBcJ_T0032893.1 MGP_BALBcJ_G0019218.1 mouse_genomes_project 11 103531422 103562101 - MGP_BALBcJ_P0032893 Cdc27 protein_coding protein_coding MGP_BALBcJ_T0032894.1 MGP_BALBcJ_G0019218.1 mouse_genomes_project 11 103542911 103562243 - Cdc27 protein_coding processed_transcript MGP_BALBcJ_T0033320.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114401476 114406004 - MGP_BALBcJ_P0033320 Nat9 protein_coding protein_coding MGP_BALBcJ_T0033321.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114401476 114406493 - MGP_BALBcJ_P0033321 Nat9 protein_coding protein_coding MGP_BALBcJ_T0033322.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114401476 114405981 - MGP_BALBcJ_P0033322 Nat9 protein_coding protein_coding MGP_BALBcJ_T0033323.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114401476 114406039 - MGP_BALBcJ_P0033323 Nat9 protein_coding protein_coding MGP_BALBcJ_T0033324.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114403135 114405911 - Nat9 protein_coding processed_transcript MGP_BALBcJ_T0033325.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114403239 114405730 - Nat9 protein_coding processed_transcript MGP_BALBcJ_T0033326.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114403429 114406491 - Nat9 protein_coding processed_transcript MGP_BALBcJ_T0033327.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114403430 114406508 - Nat9 protein_coding processed_transcript MGP_BALBcJ_T0033328.1 MGP_BALBcJ_G0019317.1 mouse_genomes_project 11 114403613 114405925 - Nat9 protein_coding processed_transcript MGP_BALBcJ_T0098817.1 MGP_BALBcJ_G0036870.1 mouse_genomes_project 11 32637215 32637932 + Gm12122 sense_intronic sense_intronic MGP_BALBcJ_T0012536.1 MGP_BALBcJ_G0010633.1 mouse_genomes_project 11 30660971 30661359 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033805.1 MGP_BALBcJ_G0019410.1 mouse_genomes_project 11 117654617 117667407 - MGP_BALBcJ_P0033805 Cant1 protein_coding protein_coding MGP_BALBcJ_T0033806.1 MGP_BALBcJ_G0019410.1 mouse_genomes_project 11 117654617 117667373 - MGP_BALBcJ_P0033806 Cant1 protein_coding protein_coding MGP_BALBcJ_T0033807.1 MGP_BALBcJ_G0019410.1 mouse_genomes_project 11 117654618 117667344 - MGP_BALBcJ_P0033807 Cant1 protein_coding protein_coding MGP_BALBcJ_T0033808.1 MGP_BALBcJ_G0019410.1 mouse_genomes_project 11 117655964 117667373 - MGP_BALBcJ_P0033808 Cant1 protein_coding protein_coding MGP_BALBcJ_T0033809.1 MGP_BALBcJ_G0019410.1 mouse_genomes_project 11 117655964 117664115 - MGP_BALBcJ_P0033809 Cant1 protein_coding protein_coding MGP_BALBcJ_T0033810.1 MGP_BALBcJ_G0019410.1 mouse_genomes_project 11 117655964 117667344 - MGP_BALBcJ_P0033810 Cant1 protein_coding protein_coding MGP_BALBcJ_T0012578.1 MGP_BALBcJ_G0010675.1 mouse_genomes_project 11 51495547 51495900 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006307.1 MGP_BALBcJ_G0005261.1 mouse_genomes_project 11 99214983 99217024 + Gm12349 lincRNA lincRNA MGP_BALBcJ_T0017214.1 MGP_BALBcJ_G0015143.1 mouse_genomes_project 11 97533932 97534427 - Gm12356 processed_transcript processed_transcript MGP_BALBcJ_T0012600.1 MGP_BALBcJ_G0010697.1 mouse_genomes_project 11 56535284 56536299 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030629.1 MGP_BALBcJ_G0018649.1 mouse_genomes_project 11 73633031 73689416 + MGP_BALBcJ_P0030629 Smyd4 protein_coding protein_coding MGP_BALBcJ_T0030630.1 MGP_BALBcJ_G0018649.1 mouse_genomes_project 11 73633093 73666746 + Smyd4 protein_coding retained_intron MGP_BALBcJ_T0030631.1 MGP_BALBcJ_G0018649.1 mouse_genomes_project 11 73671181 73674385 + Smyd4 protein_coding processed_transcript MGP_BALBcJ_T0030632.1 MGP_BALBcJ_G0018649.1 mouse_genomes_project 11 73683326 73684351 + Smyd4 protein_coding processed_transcript MGP_BALBcJ_T0032305.1 MGP_BALBcJ_G0019101.1 mouse_genomes_project 11 99475233 99503538 + Ttc25 protein_coding retained_intron MGP_BALBcJ_T0032306.1 MGP_BALBcJ_G0019101.1 mouse_genomes_project 11 99475249 99479746 + Ttc25 protein_coding retained_intron MGP_BALBcJ_T0032307.1 MGP_BALBcJ_G0019101.1 mouse_genomes_project 11 99475340 99505690 + MGP_BALBcJ_P0032307 Ttc25 protein_coding protein_coding MGP_BALBcJ_T0032308.1 MGP_BALBcJ_G0019101.1 mouse_genomes_project 11 99479082 99479864 + Ttc25 protein_coding retained_intron MGP_BALBcJ_T0003328.1 MGP_BALBcJ_G0003069.1 mouse_genomes_project 11 116314394 116316514 - Gm11730 antisense antisense MGP_BALBcJ_T0003329.1 MGP_BALBcJ_G0003069.1 mouse_genomes_project 11 116314531 116316474 - Gm11730 antisense antisense MGP_BALBcJ_T0033770.1 MGP_BALBcJ_G0019400.1 mouse_genomes_project 11 117103887 117109271 + MGP_BALBcJ_P0033770 Tmem235 protein_coding protein_coding MGP_BALBcJ_T0031863.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95606503 95613103 - MGP_BALBcJ_P0031863 Nfe2l1 protein_coding protein_coding MGP_BALBcJ_T0031864.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95606513 95619095 - MGP_BALBcJ_P0031864 Nfe2l1 protein_coding protein_coding MGP_BALBcJ_T0031865.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95606688 95616811 - MGP_BALBcJ_P0031865 Nfe2l1 protein_coding protein_coding MGP_BALBcJ_T0031866.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95609182 95613217 - MGP_BALBcJ_P0031866 Nfe2l1 protein_coding protein_coding MGP_BALBcJ_T0031867.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95609559 95613098 - MGP_BALBcJ_P0031867 Nfe2l1 protein_coding protein_coding MGP_BALBcJ_T0031868.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95610435 95611815 - Nfe2l1 protein_coding processed_transcript MGP_BALBcJ_T0031869.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95611312 95613642 - Nfe2l1 protein_coding processed_transcript MGP_BALBcJ_T0031870.1 MGP_BALBcJ_G0018954.1 mouse_genomes_project 11 95616824 95618587 - Nfe2l1 protein_coding processed_transcript MGP_BALBcJ_T0098308.1 MGP_BALBcJ_G0036362.1 mouse_genomes_project 11 41983389 41983844 + pseudogene pseudogene MGP_BALBcJ_T0032359.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99797466 99826085 + MGP_BALBcJ_P0032359 protein_coding protein_coding MGP_BALBcJ_T0032360.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99797525 99800400 + MGP_BALBcJ_P0032360 protein_coding protein_coding MGP_BALBcJ_T0032361.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99797771 99826085 + MGP_BALBcJ_P0032361 protein_coding protein_coding MGP_BALBcJ_T0032362.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99798997 99801873 + MGP_BALBcJ_P0032362 protein_coding protein_coding MGP_BALBcJ_T0032363.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99799136 99826084 + MGP_BALBcJ_P0032363 protein_coding protein_coding MGP_BALBcJ_T0032364.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99799137 99817917 + protein_coding processed_transcript MGP_BALBcJ_T0032365.1 MGP_BALBcJ_G0019114.1 mouse_genomes_project 11 99819949 99821038 + protein_coding processed_transcript MGP_BALBcJ_T0003183.1 MGP_BALBcJ_G0002953.1 mouse_genomes_project 11 60975993 60976648 - Cdrt4os2 antisense antisense MGP_BALBcJ_T0033800.1 MGP_BALBcJ_G0019409.1 mouse_genomes_project 11 117641085 117646486 - MGP_BALBcJ_P0033800 Lgals3bp protein_coding protein_coding MGP_BALBcJ_T0033801.1 MGP_BALBcJ_G0019409.1 mouse_genomes_project 11 117641085 117650425 - MGP_BALBcJ_P0033801 Lgals3bp protein_coding protein_coding MGP_BALBcJ_T0033802.1 MGP_BALBcJ_G0019409.1 mouse_genomes_project 11 117644941 117650185 - MGP_BALBcJ_P0033802 Lgals3bp protein_coding protein_coding MGP_BALBcJ_T0033803.1 MGP_BALBcJ_G0019409.1 mouse_genomes_project 11 117645143 117650205 - Lgals3bp protein_coding processed_transcript MGP_BALBcJ_T0033804.1 MGP_BALBcJ_G0019409.1 mouse_genomes_project 11 117648093 117649371 - MGP_BALBcJ_P0033804 Lgals3bp protein_coding protein_coding MGP_BALBcJ_T0032200.1 MGP_BALBcJ_G0019040.1 mouse_genomes_project 11 98437534 98438565 - MGP_BALBcJ_P0032200 protein_coding protein_coding MGP_BALBcJ_T0031125.1 MGP_BALBcJ_G0018760.1 mouse_genomes_project 11 80465092 80475390 - MGP_BALBcJ_P0031125 Gm17268 protein_coding protein_coding MGP_BALBcJ_T0031719.1 MGP_BALBcJ_G0018912.1 mouse_genomes_project 11 93693586 93707065 - MGP_BALBcJ_P0031719 Sgca protein_coding protein_coding MGP_BALBcJ_T0031720.1 MGP_BALBcJ_G0018912.1 mouse_genomes_project 11 93693592 93701414 - MGP_BALBcJ_P0031720 Sgca protein_coding protein_coding MGP_BALBcJ_T0031721.1 MGP_BALBcJ_G0018912.1 mouse_genomes_project 11 93693617 93704201 - MGP_BALBcJ_P0031721 Sgca protein_coding protein_coding MGP_BALBcJ_T0031722.1 MGP_BALBcJ_G0018912.1 mouse_genomes_project 11 93694003 93707065 - MGP_BALBcJ_P0031722 Sgca protein_coding protein_coding MGP_BALBcJ_T0031724.1 MGP_BALBcJ_G0018912.1 mouse_genomes_project 11 93702963 93704227 - MGP_BALBcJ_P0031724 Sgca protein_coding protein_coding MGP_BALBcJ_T0030963.1 MGP_BALBcJ_G0018716.1 mouse_genomes_project 11 76700419 76715628 + MGP_BALBcJ_P0030963 Pigs protein_coding unknown_likely_coding MGP_BALBcJ_T0033922.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119265317 119305101 - Aatk protein_coding processed_transcript MGP_BALBcJ_T0033923.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119265317 119270421 - Aatk protein_coding processed_transcript MGP_BALBcJ_T0033924.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119265317 119305004 - MGP_BALBcJ_P0033924 Aatk protein_coding protein_coding MGP_BALBcJ_T0033925.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119267228 119281059 - MGP_BALBcJ_P0033925 Aatk protein_coding protein_coding MGP_BALBcJ_T0033926.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119270407 119274881 - Aatk protein_coding processed_transcript MGP_BALBcJ_T0033927.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119271710 119275140 - Aatk protein_coding processed_transcript MGP_BALBcJ_T0033928.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119273357 119274856 - Aatk protein_coding processed_transcript MGP_BALBcJ_T0033929.1 MGP_BALBcJ_G0019431.1 mouse_genomes_project 11 119274721 119278151 - Aatk protein_coding processed_transcript MGP_BALBcJ_T0029728.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65499156 65713328 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0029729.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65593747 65631722 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0029730.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65632689 65651566 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0029731.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65632725 65737005 + MGP_BALBcJ_P0029731 Gas7 protein_coding protein_coding MGP_BALBcJ_T0029732.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65642669 65737002 + MGP_BALBcJ_P0029732 Gas7 protein_coding unknown_likely_coding MGP_BALBcJ_T0029733.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65642710 65718549 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0029734.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65642720 65713313 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0029735.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65700215 65731745 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0029737.1 MGP_BALBcJ_G0018431.1 mouse_genomes_project 11 65730228 65731621 + Gas7 protein_coding processed_transcript MGP_BALBcJ_T0033968.1 MGP_BALBcJ_G0019439.1 mouse_genomes_project 11 119621129 119627764 + MGP_BALBcJ_P0033968 Fscn2 protein_coding protein_coding MGP_BALBcJ_T0033969.1 MGP_BALBcJ_G0019439.1 mouse_genomes_project 11 119626137 119627544 + Fscn2 protein_coding processed_transcript MGP_BALBcJ_T0033970.1 MGP_BALBcJ_G0019439.1 mouse_genomes_project 11 119626308 119627416 + Fscn2 protein_coding processed_transcript MGP_BALBcJ_T0030474.1 MGP_BALBcJ_G0018592.1 mouse_genomes_project 11 71342416 71345224 - MGP_BALBcJ_P0030474 Gsg2 protein_coding protein_coding MGP_BALBcJ_T0032854.1 MGP_BALBcJ_G0019211.1 mouse_genomes_project 11 102775715 102819467 + MGP_BALBcJ_P0032854 Wnt3 protein_coding protein_coding MGP_BALBcJ_T0011294.1 MGP_BALBcJ_G0009419.1 mouse_genomes_project 11 106905375 106905662 + Gm23120 misc_RNA misc_RNA MGP_BALBcJ_T0029062.1 MGP_BALBcJ_G0018253.1 mouse_genomes_project 11 52069351 52071326 - MGP_BALBcJ_P0029062 Il3 protein_coding protein_coding MGP_BALBcJ_T0029923.1 MGP_BALBcJ_G0018474.1 mouse_genomes_project 11 67519040 67534202 - MGP_BALBcJ_P0029923 Kdm6b protein_coding protein_coding MGP_BALBcJ_T0029924.1 MGP_BALBcJ_G0018474.1 mouse_genomes_project 11 67523844 67524782 - Kdm6b protein_coding processed_transcript MGP_BALBcJ_T0031611.1 MGP_BALBcJ_G0018888.1 mouse_genomes_project 11 92606694 92625934 - MGP_BALBcJ_P0031611 Gm20390 protein_coding protein_coding MGP_BALBcJ_T0009701.1 MGP_BALBcJ_G0007826.1 mouse_genomes_project 11 83444931 83444998 + Gm23564 miRNA miRNA MGP_BALBcJ_T0029252.1 MGP_BALBcJ_G0018323.1 mouse_genomes_project 11 56857601 56858215 + MGP_BALBcJ_P0029252 Hist3h2ba protein_coding protein_coding MGP_BALBcJ_T0028079.1 MGP_BALBcJ_G0017994.1 mouse_genomes_project 11 13971918 13974992 + MGP_BALBcJ_P0028079 Fbxo48 protein_coding protein_coding MGP_BALBcJ_T0028080.1 MGP_BALBcJ_G0017994.1 mouse_genomes_project 11 13971953 13975317 + MGP_BALBcJ_P0028080 Fbxo48 protein_coding protein_coding MGP_BALBcJ_T0012516.1 MGP_BALBcJ_G0010613.1 mouse_genomes_project 11 26533690 26535691 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032399.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100039062 100043993 + MGP_BALBcJ_P0032399 Mlx protein_coding protein_coding MGP_BALBcJ_T0032400.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100039062 100043993 + MGP_BALBcJ_P0032400 Mlx protein_coding protein_coding MGP_BALBcJ_T0032401.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100039075 100042912 + Mlx protein_coding processed_transcript MGP_BALBcJ_T0032402.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100039075 100042932 + Mlx protein_coding processed_transcript MGP_BALBcJ_T0032403.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100039085 100043993 + MGP_BALBcJ_P0032403 Mlx protein_coding protein_coding MGP_BALBcJ_T0032404.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100039089 100040751 + MGP_BALBcJ_P0032404 Mlx protein_coding protein_coding MGP_BALBcJ_T0032405.1 MGP_BALBcJ_G0019121.1 mouse_genomes_project 11 100041447 100043304 + Mlx protein_coding processed_transcript MGP_BALBcJ_T0033259.1 MGP_BALBcJ_G0019299.1 mouse_genomes_project 11 113868116 113914091 + MGP_BALBcJ_P0033259 Ttyh2 protein_coding protein_coding MGP_BALBcJ_T0033260.1 MGP_BALBcJ_G0019299.1 mouse_genomes_project 11 113868201 113883524 + Ttyh2 protein_coding processed_transcript MGP_BALBcJ_T0098826.1 MGP_BALBcJ_G0036878.1 mouse_genomes_project 11 107464456 107465518 + Gm11656 sense_intronic sense_intronic MGP_BALBcJ_T0098827.1 MGP_BALBcJ_G0036878.1 mouse_genomes_project 11 107464472 107467669 + Gm11656 sense_intronic sense_intronic MGP_BALBcJ_T0012515.1 MGP_BALBcJ_G0010612.1 mouse_genomes_project 11 26147942 26148785 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009733.1 MGP_BALBcJ_G0007858.1 mouse_genomes_project 11 104617183 104617302 + Gm23990 miRNA miRNA MGP_BALBcJ_T0012642.1 MGP_BALBcJ_G0010739.1 mouse_genomes_project 11 71436189 71436408 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032578.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 100995016 101022612 - Mpp3 protein_coding processed_transcript MGP_BALBcJ_T0032579.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 100995016 101021794 - MGP_BALBcJ_P0032579 Mpp3 protein_coding protein_coding MGP_BALBcJ_T0032580.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 100995016 101024585 - MGP_BALBcJ_P0032580 Mpp3 protein_coding protein_coding MGP_BALBcJ_T0032581.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 100995016 101022633 - MGP_BALBcJ_P0032581 Mpp3 protein_coding protein_coding MGP_BALBcJ_T0032582.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 101003831 101005613 - Mpp3 protein_coding retained_intron MGP_BALBcJ_T0032583.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 101012567 101022615 - MGP_BALBcJ_P0032583 Mpp3 protein_coding protein_coding MGP_BALBcJ_T0032584.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 101016327 101022612 - Mpp3 protein_coding processed_transcript MGP_BALBcJ_T0032585.1 MGP_BALBcJ_G0019159.1 mouse_genomes_project 11 101019137 101021557 - Mpp3 protein_coding processed_transcript MGP_BALBcJ_T0034135.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058184 120068176 - MGP_BALBcJ_P0034135 Dus1l protein_coding protein_coding MGP_BALBcJ_T0034136.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058185 120062220 - Dus1l protein_coding retained_intron MGP_BALBcJ_T0034137.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058185 120068168 - MGP_BALBcJ_P0034137 Dus1l protein_coding protein_coding MGP_BALBcJ_T0034138.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058185 120068168 - MGP_BALBcJ_P0034138 Dus1l protein_coding protein_coding MGP_BALBcJ_T0034139.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058187 120058834 - Dus1l protein_coding retained_intron MGP_BALBcJ_T0034140.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058189 120068162 - Dus1l protein_coding retained_intron MGP_BALBcJ_T0034141.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120058189 120068171 - MGP_BALBcJ_P0034141 Dus1l protein_coding protein_coding MGP_BALBcJ_T0034142.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120064546 120068150 - MGP_BALBcJ_P0034142 Dus1l protein_coding protein_coding MGP_BALBcJ_T0034143.1 MGP_BALBcJ_G0019472.1 mouse_genomes_project 11 120065617 120068166 - MGP_BALBcJ_P0034143 Dus1l protein_coding protein_coding MGP_BALBcJ_T0029076.1 MGP_BALBcJ_G0018256.1 mouse_genomes_project 11 52242913 52323975 + MGP_BALBcJ_P0029076 Fnip1 protein_coding protein_coding MGP_BALBcJ_T0029077.1 MGP_BALBcJ_G0018256.1 mouse_genomes_project 11 52269673 52308489 + MGP_BALBcJ_P0029077 Fnip1 protein_coding protein_coding MGP_BALBcJ_T0033486.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115101341 115135939 + MGP_BALBcJ_P0033486 Myo15b protein_coding protein_coding MGP_BALBcJ_T0033487.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115120876 115123527 + Myo15b protein_coding processed_transcript MGP_BALBcJ_T0033488.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115120894 115124634 + MGP_BALBcJ_P0033488 Myo15b protein_coding protein_coding MGP_BALBcJ_T0033489.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115123796 115130808 + MGP_BALBcJ_P0033489 Myo15b protein_coding protein_coding MGP_BALBcJ_T0033490.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115129799 115130809 + MGP_BALBcJ_P0033490 Myo15b protein_coding protein_coding MGP_BALBcJ_T0033491.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115130170 115135935 + Myo15b protein_coding retained_intron MGP_BALBcJ_T0033492.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115130963 115135950 + MGP_BALBcJ_P0033492 Myo15b protein_coding protein_coding MGP_BALBcJ_T0033493.1 MGP_BALBcJ_G0019346.1 mouse_genomes_project 11 115133585 115134516 + Myo15b protein_coding retained_intron MGP_BALBcJ_T0028138.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18280636 18363856 + MGP_BALBcJ_P0028138 Vps54 protein_coding protein_coding MGP_BALBcJ_T0028139.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18280636 18363870 + MGP_BALBcJ_P0028139 Vps54 protein_coding protein_coding MGP_BALBcJ_T0028140.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18309537 18363060 + MGP_BALBcJ_P0028140 Vps54 protein_coding protein_coding MGP_BALBcJ_T0028141.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18318753 18333636 + Vps54 protein_coding processed_transcript MGP_BALBcJ_T0028142.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18341869 18349718 + Vps54 protein_coding processed_transcript MGP_BALBcJ_T0028143.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18355229 18357718 + Vps54 protein_coding processed_transcript MGP_BALBcJ_T0028144.1 MGP_BALBcJ_G0018012.1 mouse_genomes_project 11 18356805 18363272 + Vps54 protein_coding processed_transcript MGP_BALBcJ_T0009651.1 MGP_BALBcJ_G0007776.1 mouse_genomes_project 11 47784147 47784209 + Mir6919 miRNA miRNA MGP_BALBcJ_T0033225.1 MGP_BALBcJ_G0019292.1 mouse_genomes_project 11 112793291 112800777 + MGP_BALBcJ_P0033225 Sstr2 protein_coding protein_coding MGP_BALBcJ_T0033226.1 MGP_BALBcJ_G0019292.1 mouse_genomes_project 11 112793425 112800643 + MGP_BALBcJ_P0033226 Sstr2 protein_coding protein_coding MGP_BALBcJ_T0033227.1 MGP_BALBcJ_G0019292.1 mouse_genomes_project 11 112799004 112800384 + MGP_BALBcJ_P0033227 Sstr2 protein_coding protein_coding MGP_BALBcJ_T0027915.1 MGP_BALBcJ_G0017957.1 mouse_genomes_project 11 3148598 3150215 + MGP_BALBcJ_P0027915 A730071L15Rik protein_coding protein_coding MGP_BALBcJ_T0017119.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13955778 13971643 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0017120.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13955783 13971662 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0017121.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13955946 13971586 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0017122.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13956210 13971644 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0017123.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13956253 13971826 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0017124.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13956326 13971626 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0017125.1 MGP_BALBcJ_G0015091.1 mouse_genomes_project 11 13959807 13971637 - Eldr processed_transcript processed_transcript MGP_BALBcJ_T0029738.1 MGP_BALBcJ_G0018433.1 mouse_genomes_project 11 65746649 65754627 + MGP_BALBcJ_P0029738 Rcvrn protein_coding protein_coding MGP_BALBcJ_T0012766.1 MGP_BALBcJ_G0010863.1 mouse_genomes_project 11 120292489 120292782 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033003.1 MGP_BALBcJ_G0019245.1 mouse_genomes_project 11 105331099 105332694 - MGP_BALBcJ_P0033003 Gh protein_coding protein_coding MGP_BALBcJ_T0030608.1 MGP_BALBcJ_G0018643.1 mouse_genomes_project 11 73203205 73447701 + MGP_BALBcJ_P0030608 Smg6 protein_coding protein_coding MGP_BALBcJ_T0030609.1 MGP_BALBcJ_G0018643.1 mouse_genomes_project 11 73207900 73447701 + MGP_BALBcJ_P0030609 Smg6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030610.1 MGP_BALBcJ_G0018643.1 mouse_genomes_project 11 73267534 73270380 + Smg6 protein_coding retained_intron MGP_BALBcJ_T0030611.1 MGP_BALBcJ_G0018643.1 mouse_genomes_project 11 73272026 73421533 + MGP_BALBcJ_P0030611 Smg6 protein_coding protein_coding MGP_BALBcJ_T0030612.1 MGP_BALBcJ_G0018643.1 mouse_genomes_project 11 73414598 73421533 + Smg6 protein_coding processed_transcript MGP_BALBcJ_T0030613.1 MGP_BALBcJ_G0018643.1 mouse_genomes_project 11 73442895 73446434 + Smg6 protein_coding processed_transcript MGP_BALBcJ_T0033964.1 MGP_BALBcJ_G0019437.1 mouse_genomes_project 11 119606044 119607846 - protein_coding retained_intron MGP_BALBcJ_T0033965.1 MGP_BALBcJ_G0019437.1 mouse_genomes_project 11 119606148 119607840 - MGP_BALBcJ_P0033965 protein_coding protein_coding MGP_BALBcJ_T0033966.1 MGP_BALBcJ_G0019437.1 mouse_genomes_project 11 119606404 119607856 - protein_coding retained_intron MGP_BALBcJ_T0030147.1 MGP_BALBcJ_G0018523.1 mouse_genomes_project 11 68320164 68324516 + MGP_BALBcJ_P0030147 protein_coding protein_coding MGP_BALBcJ_T0030148.1 MGP_BALBcJ_G0018523.1 mouse_genomes_project 11 68320240 68322206 + MGP_BALBcJ_P0030148 protein_coding protein_coding MGP_BALBcJ_T0030149.1 MGP_BALBcJ_G0018523.1 mouse_genomes_project 11 68321204 68321514 + MGP_BALBcJ_P0030149 protein_coding protein_coding MGP_BALBcJ_T0029228.1 MGP_BALBcJ_G0018307.1 mouse_genomes_project 11 56512781 56513747 + MGP_BALBcJ_P0029228 protein_coding protein_coding MGP_BALBcJ_T0100512.1 MGP_BALBcJ_G0038548.1 mouse_genomes_project 11 58785191 58785317 + Gm24945 snoRNA snoRNA MGP_BALBcJ_T0100536.1 MGP_BALBcJ_G0038572.1 mouse_genomes_project 11 89447766 89447903 - Gm22762 snoRNA snoRNA MGP_BALBcJ_T0012750.1 MGP_BALBcJ_G0010847.1 mouse_genomes_project 11 112855220 112856003 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012604.1 MGP_BALBcJ_G0010701.1 mouse_genomes_project 11 57501647 57502292 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030010.1 MGP_BALBcJ_G0018494.1 mouse_genomes_project 11 67930212 67942599 - MGP_BALBcJ_P0030010 Chrnb1 protein_coding protein_coding MGP_BALBcJ_T0030011.1 MGP_BALBcJ_G0018494.1 mouse_genomes_project 11 67939359 67940926 - Chrnb1 protein_coding retained_intron MGP_BALBcJ_T0030012.1 MGP_BALBcJ_G0018494.1 mouse_genomes_project 11 67939434 67940470 - Chrnb1 protein_coding retained_intron MGP_BALBcJ_T0030013.1 MGP_BALBcJ_G0018494.1 mouse_genomes_project 11 67940169 67942561 - Chrnb1 protein_coding processed_transcript MGP_BALBcJ_T0006273.1 MGP_BALBcJ_G0005237.1 mouse_genomes_project 11 83262575 83266795 - 1700109G15Rik lincRNA lincRNA MGP_BALBcJ_T0033380.1 MGP_BALBcJ_G0019330.1 mouse_genomes_project 11 114661199 114668936 + MGP_BALBcJ_P0033380 Trim80 protein_coding protein_coding MGP_BALBcJ_T0003323.1 MGP_BALBcJ_G0003064.1 mouse_genomes_project 11 114683601 114685011 - Gm11695 antisense antisense MGP_BALBcJ_T0006168.1 MGP_BALBcJ_G0005155.1 mouse_genomes_project 11 21566094 21650901 + 4933430M04Rik lincRNA lincRNA MGP_BALBcJ_T0030346.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69150337 69170466 - MGP_BALBcJ_P0030346 Dhx33 protein_coding protein_coding MGP_BALBcJ_T0030347.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69152757 69160222 - MGP_BALBcJ_P0030347 Dhx33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030348.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69152998 69170449 - MGP_BALBcJ_P0030348 Dhx33 protein_coding protein_coding MGP_BALBcJ_T0030349.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69152998 69170369 - MGP_BALBcJ_P0030349 Dhx33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030350.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69157956 69161430 - Dhx33 protein_coding retained_intron MGP_BALBcJ_T0030351.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69158366 69162235 - MGP_BALBcJ_P0030351 Dhx33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030352.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69159351 69160259 - Dhx33 protein_coding retained_intron MGP_BALBcJ_T0030353.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69161457 69167164 - Dhx33 protein_coding processed_transcript MGP_BALBcJ_T0030354.1 MGP_BALBcJ_G0018561.1 mouse_genomes_project 11 69165365 69170466 - Dhx33 protein_coding retained_intron MGP_BALBcJ_T0031539.1 MGP_BALBcJ_G0018868.1 mouse_genomes_project 11 87601947 87604162 - MGP_BALBcJ_P0031539 Gm15698 protein_coding protein_coding MGP_BALBcJ_T0009641.1 MGP_BALBcJ_G0007766.1 mouse_genomes_project 11 32905262 32905372 + Mir218-2 miRNA miRNA MGP_BALBcJ_T0028130.1 MGP_BALBcJ_G0018010.1 mouse_genomes_project 11 17864049 17871528 - MGP_BALBcJ_P0028130 Lgalsl protein_coding protein_coding MGP_BALBcJ_T0028131.1 MGP_BALBcJ_G0018010.1 mouse_genomes_project 11 17866823 17871227 - Lgalsl protein_coding processed_transcript MGP_BALBcJ_T0028132.1 MGP_BALBcJ_G0018010.1 mouse_genomes_project 11 17869783 17871528 - Lgalsl protein_coding processed_transcript MGP_BALBcJ_T0028133.1 MGP_BALBcJ_G0018010.1 mouse_genomes_project 11 17870268 17871494 - Lgalsl protein_coding processed_transcript MGP_BALBcJ_T0029246.1 MGP_BALBcJ_G0018320.1 mouse_genomes_project 11 56795553 56811613 - MGP_BALBcJ_P0029246 Zfp39 protein_coding protein_coding MGP_BALBcJ_T0102133.1 MGP_BALBcJ_G0039950.1 mouse_genomes_project 11 48537814 48538815 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0033228.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112823427 112839523 + MGP_BALBcJ_P0033228 Cog1 protein_coding protein_coding MGP_BALBcJ_T0033229.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112823586 112838718 + MGP_BALBcJ_P0033229 Cog1 protein_coding protein_coding MGP_BALBcJ_T0033230.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112829679 112831247 + Cog1 protein_coding retained_intron MGP_BALBcJ_T0033231.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112832372 112843745 + MGP_BALBcJ_P0033231 Cog1 protein_coding protein_coding MGP_BALBcJ_T0033232.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112832509 112837948 + MGP_BALBcJ_P0033232 Cog1 protein_coding protein_coding MGP_BALBcJ_T0033233.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112832527 112837984 + MGP_BALBcJ_P0033233 Cog1 protein_coding protein_coding MGP_BALBcJ_T0033234.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112834245 112838719 + MGP_BALBcJ_P0033234 Cog1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033235.1 MGP_BALBcJ_G0019293.1 mouse_genomes_project 11 112834950 112838719 + MGP_BALBcJ_P0033235 Cog1 protein_coding protein_coding MGP_BALBcJ_T0033282.1 MGP_BALBcJ_G0019303.1 mouse_genomes_project 11 113996283 114004663 + MGP_BALBcJ_P0033282 Gpr142 protein_coding protein_coding MGP_BALBcJ_T0033283.1 MGP_BALBcJ_G0019303.1 mouse_genomes_project 11 113996283 114004663 + MGP_BALBcJ_P0033283 Gpr142 protein_coding protein_coding MGP_BALBcJ_T0028456.1 MGP_BALBcJ_G0018086.1 mouse_genomes_project 11 30538959 30539939 - Gm12117 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0028457.1 MGP_BALBcJ_G0018086.1 mouse_genomes_project 11 30539080 30539536 - MGP_BALBcJ_P0028457 Gm12117 protein_coding protein_coding MGP_BALBcJ_T0099281.1 MGP_BALBcJ_G0037317.1 mouse_genomes_project 11 87546448 87546555 + Gm23507 snRNA snRNA MGP_BALBcJ_T0098453.1 MGP_BALBcJ_G0036507.1 mouse_genomes_project 11 8139914 8140044 + Gm23065 rRNA rRNA MGP_BALBcJ_T0029233.1 MGP_BALBcJ_G0018312.1 mouse_genomes_project 11 56622889 56623901 + MGP_BALBcJ_P0029233 Olfr316 protein_coding protein_coding MGP_BALBcJ_T0099265.1 MGP_BALBcJ_G0037301.1 mouse_genomes_project 11 73213441 73213532 - Gm22733 snRNA snRNA MGP_BALBcJ_T0030124.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68171126 68200295 + MGP_BALBcJ_P0030124 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030125.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68171282 68185462 + MGP_BALBcJ_P0030125 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030126.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68171316 68181264 + Dlg4 protein_coding processed_transcript MGP_BALBcJ_T0030127.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68172507 68200295 + MGP_BALBcJ_P0030127 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030128.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68172781 68200295 + MGP_BALBcJ_P0030128 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030129.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68172917 68185358 + MGP_BALBcJ_P0030129 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030130.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68178106 68185340 + MGP_BALBcJ_P0030130 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030131.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68181025 68185200 + MGP_BALBcJ_P0030131 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030132.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68183950 68193237 + MGP_BALBcJ_P0030132 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030133.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68184231 68185119 + MGP_BALBcJ_P0030133 Dlg4 protein_coding protein_coding MGP_BALBcJ_T0030134.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68184845 68185943 + Dlg4 protein_coding retained_intron MGP_BALBcJ_T0030135.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68194015 68199382 + MGP_BALBcJ_P0030135 Dlg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030136.1 MGP_BALBcJ_G0018519.1 mouse_genomes_project 11 68198959 68199481 + Dlg4 protein_coding retained_intron MGP_BALBcJ_T0029222.1 MGP_BALBcJ_G0018304.1 mouse_genomes_project 11 56450068 56457874 - MGP_BALBcJ_P0029222 2210407C18Rik protein_coding protein_coding MGP_BALBcJ_T0029223.1 MGP_BALBcJ_G0018304.1 mouse_genomes_project 11 56450073 56455302 - MGP_BALBcJ_P0029223 2210407C18Rik protein_coding protein_coding MGP_BALBcJ_T0029224.1 MGP_BALBcJ_G0018304.1 mouse_genomes_project 11 56454111 56455295 - 2210407C18Rik protein_coding processed_transcript MGP_BALBcJ_T0027692.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 830250 - MGP_BALBcJ_P0027692 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0027693.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 830982 - MGP_BALBcJ_P0027693 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0027694.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 831181 - MGP_BALBcJ_P0027694 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0027695.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 831100 - MGP_BALBcJ_P0027695 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0027696.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 831066 - MGP_BALBcJ_P0027696 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0027697.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 831017 - MGP_BALBcJ_P0027697 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0027698.1 MGP_BALBcJ_G0017908.1 mouse_genomes_project 11 814946 830265 - MGP_BALBcJ_P0027698 Tcn2 protein_coding protein_coding MGP_BALBcJ_T0003156.1 MGP_BALBcJ_G0002929.1 mouse_genomes_project 11 53332684 53346064 + Gm12236 antisense antisense MGP_BALBcJ_T0032605.1 MGP_BALBcJ_G0019165.1 mouse_genomes_project 11 101150097 101153956 - MGP_BALBcJ_P0032605 Tmem101 protein_coding protein_coding MGP_BALBcJ_T0032606.1 MGP_BALBcJ_G0019165.1 mouse_genomes_project 11 101151725 101153899 - Tmem101 protein_coding processed_transcript MGP_BALBcJ_T0032607.1 MGP_BALBcJ_G0019165.1 mouse_genomes_project 11 101153366 101153907 - Tmem101 protein_coding processed_transcript MGP_BALBcJ_T0003203.1 MGP_BALBcJ_G0002969.1 mouse_genomes_project 11 67808512 67817523 + Tnfsf13os antisense antisense MGP_BALBcJ_T0003204.1 MGP_BALBcJ_G0002969.1 mouse_genomes_project 11 67810703 67817900 + Tnfsf13os antisense antisense MGP_BALBcJ_T0003205.1 MGP_BALBcJ_G0002969.1 mouse_genomes_project 11 67810875 67817900 + Tnfsf13os antisense antisense MGP_BALBcJ_T0028855.1 MGP_BALBcJ_G0018197.1 mouse_genomes_project 11 48529672 48532632 - MGP_BALBcJ_P0028855 Prop1 protein_coding protein_coding MGP_BALBcJ_T0028856.1 MGP_BALBcJ_G0018197.1 mouse_genomes_project 11 48530058 48531321 - Prop1 protein_coding retained_intron MGP_BALBcJ_T0028857.1 MGP_BALBcJ_G0018197.1 mouse_genomes_project 11 48531080 48532618 - MGP_BALBcJ_P0028857 Prop1 protein_coding protein_coding MGP_BALBcJ_T0098465.1 MGP_BALBcJ_G0036519.1 mouse_genomes_project 11 84968151 84968271 + Gm23667 rRNA rRNA MGP_BALBcJ_T0030591.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73175258 73182128 + MGP_BALBcJ_P0030591 Tsr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030592.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73175265 73186530 + MGP_BALBcJ_P0030592 Tsr1 protein_coding protein_coding MGP_BALBcJ_T0030593.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73175285 73179043 + Tsr1 protein_coding retained_intron MGP_BALBcJ_T0030594.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73175301 73185682 + MGP_BALBcJ_P0030594 Tsr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030595.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73178900 73181093 + Tsr1 protein_coding retained_intron MGP_BALBcJ_T0030596.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73181157 73185502 + MGP_BALBcJ_P0030596 Tsr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030597.1 MGP_BALBcJ_G0018641.1 mouse_genomes_project 11 73182398 73185531 + Tsr1 protein_coding retained_intron MGP_BALBcJ_T0009748.1 MGP_BALBcJ_G0007873.1 mouse_genomes_project 11 119272730 119272828 - Mir338 miRNA miRNA MGP_BALBcJ_T0032015.1 MGP_BALBcJ_G0018987.1 mouse_genomes_project 11 96820960 96827375 - MGP_BALBcJ_P0032015 Arl5c protein_coding protein_coding MGP_BALBcJ_T0032016.1 MGP_BALBcJ_G0018987.1 mouse_genomes_project 11 96825074 96827123 - MGP_BALBcJ_P0032016 Arl5c protein_coding protein_coding MGP_BALBcJ_T0003341.1 MGP_BALBcJ_G0003081.1 mouse_genomes_project 11 119790800 119794988 - Gm11789 antisense antisense MGP_BALBcJ_T0003342.1 MGP_BALBcJ_G0003081.1 mouse_genomes_project 11 119790826 119795922 - Gm11789 antisense antisense MGP_BALBcJ_T0003343.1 MGP_BALBcJ_G0003081.1 mouse_genomes_project 11 119790852 119796218 - Gm11789 antisense antisense MGP_BALBcJ_T0003344.1 MGP_BALBcJ_G0003081.1 mouse_genomes_project 11 119792697 119795947 - Gm11789 antisense antisense MGP_BALBcJ_T0003345.1 MGP_BALBcJ_G0003081.1 mouse_genomes_project 11 119794642 119795931 - Gm11789 antisense antisense MGP_BALBcJ_T0033690.1 MGP_BALBcJ_G0019385.1 mouse_genomes_project 11 116068508 116071685 - MGP_BALBcJ_P0033690 Srsf2 protein_coding protein_coding MGP_BALBcJ_T0033691.1 MGP_BALBcJ_G0019385.1 mouse_genomes_project 11 116068511 116070810 - Srsf2 protein_coding retained_intron MGP_BALBcJ_T0033692.1 MGP_BALBcJ_G0019385.1 mouse_genomes_project 11 116068513 116070677 - MGP_BALBcJ_P0033692 Srsf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033693.1 MGP_BALBcJ_G0019385.1 mouse_genomes_project 11 116068642 116071663 - MGP_BALBcJ_P0033693 Srsf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033694.1 MGP_BALBcJ_G0019385.1 mouse_genomes_project 11 116068652 116071663 - MGP_BALBcJ_P0033694 Srsf2 protein_coding protein_coding MGP_BALBcJ_T0033695.1 MGP_BALBcJ_G0019385.1 mouse_genomes_project 11 116068706 116070162 - Srsf2 protein_coding processed_transcript MGP_BALBcJ_T0099272.1 MGP_BALBcJ_G0037308.1 mouse_genomes_project 11 81790026 81790217 + Gm23444 snRNA snRNA MGP_BALBcJ_T0030930.1 MGP_BALBcJ_G0018710.1 mouse_genomes_project 11 76574590 76614009 - MGP_BALBcJ_P0030930 Supt6 protein_coding protein_coding MGP_BALBcJ_T0030931.1 MGP_BALBcJ_G0018710.1 mouse_genomes_project 11 76574872 76591521 - Supt6 protein_coding retained_intron MGP_BALBcJ_T0031914.1 MGP_BALBcJ_G0018966.1 mouse_genomes_project 11 95934817 95948358 - MGP_BALBcJ_P0031914 Tbkbp1 protein_coding protein_coding MGP_BALBcJ_T0031915.1 MGP_BALBcJ_G0018966.1 mouse_genomes_project 11 95934819 95948358 - MGP_BALBcJ_P0031915 Tbkbp1 protein_coding protein_coding MGP_BALBcJ_T0031916.1 MGP_BALBcJ_G0018966.1 mouse_genomes_project 11 95934823 95948692 - MGP_BALBcJ_P0031916 Tbkbp1 protein_coding protein_coding MGP_BALBcJ_T0031917.1 MGP_BALBcJ_G0018966.1 mouse_genomes_project 11 95935745 95949682 - MGP_BALBcJ_P0031917 Tbkbp1 protein_coding protein_coding MGP_BALBcJ_T0031918.1 MGP_BALBcJ_G0018966.1 mouse_genomes_project 11 95937052 95948694 - MGP_BALBcJ_P0031918 Tbkbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029012.1 MGP_BALBcJ_G0018241.1 mouse_genomes_project 11 51392151 51395593 - MGP_BALBcJ_P0029012 Il13 protein_coding protein_coding MGP_BALBcJ_T0029877.1 MGP_BALBcJ_G0018462.1 mouse_genomes_project 11 67269912 67283027 + MGP_BALBcJ_P0029877 Alox12b protein_coding protein_coding MGP_BALBcJ_T0012534.1 MGP_BALBcJ_G0010631.1 mouse_genomes_project 11 30304055 30304867 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031556.1 MGP_BALBcJ_G0018876.1 mouse_genomes_project 11 88641269 88663552 - MGP_BALBcJ_P0031556 Pctp protein_coding protein_coding MGP_BALBcJ_T0012521.1 MGP_BALBcJ_G0010618.1 mouse_genomes_project 11 27042787 27043259 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009663.1 MGP_BALBcJ_G0007788.1 mouse_genomes_project 11 58234966 58235084 - Gm27711 miRNA miRNA MGP_BALBcJ_T0030245.1 MGP_BALBcJ_G0018544.1 mouse_genomes_project 11 68780000 68784312 - MGP_BALBcJ_P0030245 Chrne protein_coding protein_coding MGP_BALBcJ_T0030246.1 MGP_BALBcJ_G0018544.1 mouse_genomes_project 11 68780000 68784334 - MGP_BALBcJ_P0030246 Chrne protein_coding protein_coding MGP_BALBcJ_T0030247.1 MGP_BALBcJ_G0018544.1 mouse_genomes_project 11 68780002 68780791 - Chrne protein_coding retained_intron MGP_BALBcJ_T0030248.1 MGP_BALBcJ_G0018544.1 mouse_genomes_project 11 68780010 68780815 - Chrne protein_coding retained_intron MGP_BALBcJ_T0031228.1 MGP_BALBcJ_G0018794.1 mouse_genomes_project 11 82116379 82121587 - MGP_BALBcJ_P0031228 Ccl6 protein_coding protein_coding MGP_BALBcJ_T0031229.1 MGP_BALBcJ_G0018794.1 mouse_genomes_project 11 82116892 82118373 - Ccl6 protein_coding retained_intron MGP_BALBcJ_T0031230.1 MGP_BALBcJ_G0018794.1 mouse_genomes_project 11 82117970 82121475 - Ccl6 protein_coding retained_intron MGP_BALBcJ_T0030577.1 MGP_BALBcJ_G0018638.1 mouse_genomes_project 11 73053447 73101332 + MGP_BALBcJ_P0030577 Mettl16 protein_coding protein_coding MGP_BALBcJ_T0030578.1 MGP_BALBcJ_G0018638.1 mouse_genomes_project 11 73053447 73111945 + MGP_BALBcJ_P0030578 Mettl16 protein_coding protein_coding MGP_BALBcJ_T0030579.1 MGP_BALBcJ_G0018638.1 mouse_genomes_project 11 73053533 73056239 + MGP_BALBcJ_P0030579 Mettl16 protein_coding protein_coding MGP_BALBcJ_T0030580.1 MGP_BALBcJ_G0018638.1 mouse_genomes_project 11 73053542 73101332 + MGP_BALBcJ_P0030580 Mettl16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030581.1 MGP_BALBcJ_G0018638.1 mouse_genomes_project 11 73086386 73100384 + Mettl16 protein_coding retained_intron MGP_BALBcJ_T0030582.1 MGP_BALBcJ_G0018638.1 mouse_genomes_project 11 73091694 73100949 + Mettl16 protein_coding processed_transcript MGP_BALBcJ_T0032366.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99827721 99852659 - MGP_BALBcJ_P0032366 Stat3 protein_coding protein_coding MGP_BALBcJ_T0032367.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99829137 99831228 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032368.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99829151 99881531 - MGP_BALBcJ_P0032368 Stat3 protein_coding protein_coding MGP_BALBcJ_T0032369.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99829596 99881630 - MGP_BALBcJ_P0032369 Stat3 protein_coding protein_coding MGP_BALBcJ_T0032370.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99830393 99834659 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032371.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99833944 99834718 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032372.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99834439 99835349 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032373.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99834886 99840262 - Stat3 protein_coding processed_transcript MGP_BALBcJ_T0032374.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99835397 99836032 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032375.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99835399 99839483 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032376.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99843691 99846374 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032377.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99846042 99846809 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0032378.1 MGP_BALBcJ_G0019115.1 mouse_genomes_project 11 99846618 99849505 - Stat3 protein_coding retained_intron MGP_BALBcJ_T0009661.1 MGP_BALBcJ_G0007786.1 mouse_genomes_project 11 58132008 58132088 - Mir6921 miRNA miRNA MGP_BALBcJ_T0034171.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120345921 120356213 - MGP_BALBcJ_P0034171 Sectm1b protein_coding protein_coding MGP_BALBcJ_T0034172.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120346994 120356182 - MGP_BALBcJ_P0034172 Sectm1b protein_coding protein_coding MGP_BALBcJ_T0034173.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120346999 120348848 - MGP_BALBcJ_P0034173 Sectm1b protein_coding protein_coding MGP_BALBcJ_T0034174.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120347045 120356189 - MGP_BALBcJ_P0034174 Sectm1b protein_coding protein_coding MGP_BALBcJ_T0034175.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120347420 120356099 - MGP_BALBcJ_P0034175 Sectm1b protein_coding protein_coding MGP_BALBcJ_T0034176.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120347872 120355947 - Sectm1b protein_coding retained_intron MGP_BALBcJ_T0034177.1 MGP_BALBcJ_G0019478.1 mouse_genomes_project 11 120348700 120349117 - Sectm1b protein_coding processed_transcript MGP_BALBcJ_T0030018.1 MGP_BALBcJ_G0018498.1 mouse_genomes_project 11 67968955 67970260 - MGP_BALBcJ_P0030018 Spem1 protein_coding protein_coding MGP_BALBcJ_T0101615.1 MGP_BALBcJ_G0039631.1 mouse_genomes_project 11 103578738 103580066 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0033882.1 MGP_BALBcJ_G0019425.1 mouse_genomes_project 11 118649548 118747833 + MGP_BALBcJ_P0033882 Rnf213 protein_coding unknown_likely_coding MGP_BALBcJ_T0033883.1 MGP_BALBcJ_G0019425.1 mouse_genomes_project 11 118652484 118747824 + MGP_BALBcJ_P0033883 Rnf213 protein_coding protein_coding MGP_BALBcJ_T0033884.1 MGP_BALBcJ_G0019425.1 mouse_genomes_project 11 118652484 118747821 + MGP_BALBcJ_P0033884 Rnf213 protein_coding protein_coding MGP_BALBcJ_T0033885.1 MGP_BALBcJ_G0019425.1 mouse_genomes_project 11 118738464 118747823 + MGP_BALBcJ_P0033885 Rnf213 protein_coding protein_coding MGP_BALBcJ_T0006350.1 MGP_BALBcJ_G0005294.1 mouse_genomes_project 11 118378820 118394572 - Gm11755 lincRNA lincRNA MGP_BALBcJ_T0003095.1 MGP_BALBcJ_G0002879.1 mouse_genomes_project 11 1544894 1553058 - Gm11961 antisense antisense MGP_BALBcJ_T0003096.1 MGP_BALBcJ_G0002879.1 mouse_genomes_project 11 1550667 1555303 - Gm11961 antisense antisense MGP_BALBcJ_T0099295.1 MGP_BALBcJ_G0037331.1 mouse_genomes_project 11 100625860 100626029 + Gm24950 snRNA snRNA MGP_BALBcJ_T0033019.1 MGP_BALBcJ_G0019250.1 mouse_genomes_project 11 105428028 105523408 - MGP_BALBcJ_P0033019 Ern1 protein_coding protein_coding MGP_BALBcJ_T0033020.1 MGP_BALBcJ_G0019250.1 mouse_genomes_project 11 105430829 105523464 - Ern1 protein_coding processed_transcript MGP_BALBcJ_T0033021.1 MGP_BALBcJ_G0019250.1 mouse_genomes_project 11 105447140 105523448 - MGP_BALBcJ_P0033021 Ern1 protein_coding protein_coding MGP_BALBcJ_T0033022.1 MGP_BALBcJ_G0019250.1 mouse_genomes_project 11 105468841 105523420 - MGP_BALBcJ_P0033022 Ern1 protein_coding protein_coding MGP_BALBcJ_T0033023.1 MGP_BALBcJ_G0019250.1 mouse_genomes_project 11 105493879 105523415 - MGP_BALBcJ_P0033023 Ern1 protein_coding protein_coding MGP_BALBcJ_T0006281.1 MGP_BALBcJ_G0005243.1 mouse_genomes_project 11 86878848 86882463 + Gm44783 lincRNA lincRNA MGP_BALBcJ_T0033506.1 MGP_BALBcJ_G0019350.1 mouse_genomes_project 11 115177139 115212520 + MGP_BALBcJ_P0033506 Sap30bp protein_coding protein_coding MGP_BALBcJ_T0033507.1 MGP_BALBcJ_G0019350.1 mouse_genomes_project 11 115177430 115201655 + Sap30bp protein_coding processed_transcript MGP_BALBcJ_T0033508.1 MGP_BALBcJ_G0019350.1 mouse_genomes_project 11 115177494 115182261 + Sap30bp protein_coding processed_transcript MGP_BALBcJ_T0033509.1 MGP_BALBcJ_G0019350.1 mouse_genomes_project 11 115177533 115210187 + MGP_BALBcJ_P0033509 Sap30bp protein_coding unknown_likely_coding MGP_BALBcJ_T0099268.1 MGP_BALBcJ_G0037304.1 mouse_genomes_project 11 78009086 78009190 + Gm23293 snRNA snRNA MGP_BALBcJ_T0032961.1 MGP_BALBcJ_G0019233.1 mouse_genomes_project 11 105057291 105081691 + MGP_BALBcJ_P0032961 Dcaf7 protein_coding protein_coding MGP_BALBcJ_T0032962.1 MGP_BALBcJ_G0019233.1 mouse_genomes_project 11 105057319 105069044 + Dcaf7 protein_coding retained_intron MGP_BALBcJ_T0030883.1 MGP_BALBcJ_G0018700.1 mouse_genomes_project 11 76381933 76387520 + MGP_BALBcJ_P0030883 Dhrs13 protein_coding protein_coding MGP_BALBcJ_T0030884.1 MGP_BALBcJ_G0018700.1 mouse_genomes_project 11 76382002 76387445 + MGP_BALBcJ_P0030884 Dhrs13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030885.1 MGP_BALBcJ_G0018700.1 mouse_genomes_project 11 76382005 76387518 + MGP_BALBcJ_P0030885 Dhrs13 protein_coding protein_coding MGP_BALBcJ_T0030886.1 MGP_BALBcJ_G0018700.1 mouse_genomes_project 11 76382012 76383131 + MGP_BALBcJ_P0030886 Dhrs13 protein_coding protein_coding MGP_BALBcJ_T0003236.1 MGP_BALBcJ_G0002994.1 mouse_genomes_project 11 86383060 86388749 - Gm11505 antisense antisense MGP_BALBcJ_T0031335.1 MGP_BALBcJ_G0018821.1 mouse_genomes_project 11 83865598 83901080 + MGP_BALBcJ_P0031335 Ppm1d protein_coding protein_coding MGP_BALBcJ_T0031336.1 MGP_BALBcJ_G0018821.1 mouse_genomes_project 11 83866518 83891224 + MGP_BALBcJ_P0031336 Ppm1d protein_coding protein_coding MGP_BALBcJ_T0031494.1 MGP_BALBcJ_G0018856.1 mouse_genomes_project 11 86485669 86489878 - MGP_BALBcJ_P0031494 protein_coding protein_coding MGP_BALBcJ_T0009681.1 MGP_BALBcJ_G0007806.1 mouse_genomes_project 11 68870476 68870546 + Mir6925 miRNA miRNA MGP_BALBcJ_T0033520.1 MGP_BALBcJ_G0019352.1 mouse_genomes_project 11 115253032 115257306 - MGP_BALBcJ_P0033520 Galk1 protein_coding protein_coding MGP_BALBcJ_T0012505.1 MGP_BALBcJ_G0010602.1 mouse_genomes_project 11 21635376 21636901 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033886.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118751758 118772144 + MGP_BALBcJ_P0033886 Endov protein_coding protein_coding MGP_BALBcJ_T0033887.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118751785 118767909 + MGP_BALBcJ_P0033887 Endov protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033888.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118751786 118769797 + MGP_BALBcJ_P0033888 Endov protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033889.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118751800 118767969 + MGP_BALBcJ_P0033889 Endov protein_coding protein_coding MGP_BALBcJ_T0033890.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118751837 118767597 + MGP_BALBcJ_P0033890 Endov protein_coding protein_coding MGP_BALBcJ_T0033891.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118751962 118765686 + MGP_BALBcJ_P0033891 Endov protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033892.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118752041 118772155 + MGP_BALBcJ_P0033892 Endov protein_coding protein_coding MGP_BALBcJ_T0033893.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118752087 118761389 + Endov protein_coding retained_intron MGP_BALBcJ_T0033894.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118752196 118763399 + Endov protein_coding processed_transcript MGP_BALBcJ_T0033895.1 MGP_BALBcJ_G0019426.1 mouse_genomes_project 11 118762549 118767607 + Endov protein_coding retained_intron MGP_BALBcJ_T0012717.1 MGP_BALBcJ_G0010814.1 mouse_genomes_project 11 99165303 99165643 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012581.1 MGP_BALBcJ_G0010678.1 mouse_genomes_project 11 51750195 51750638 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030847.1 MGP_BALBcJ_G0018696.1 mouse_genomes_project 11 76132755 76135050 - MGP_BALBcJ_P0030847 Gm10277 protein_coding protein_coding MGP_BALBcJ_T0029187.1 MGP_BALBcJ_G0018289.1 mouse_genomes_project 11 56134355 56141931 + MGP_BALBcJ_P0029187 Zfp692 protein_coding protein_coding MGP_BALBcJ_T0029188.1 MGP_BALBcJ_G0018289.1 mouse_genomes_project 11 56134458 56141945 + MGP_BALBcJ_P0029188 Zfp692 protein_coding protein_coding MGP_BALBcJ_T0032230.1 MGP_BALBcJ_G0019070.1 mouse_genomes_project 11 98832485 98833406 + MGP_BALBcJ_P0032230 Gm11565 protein_coding protein_coding MGP_BALBcJ_T0030684.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73948545 73972706 + MGP_BALBcJ_P0030684 Myo1c protein_coding protein_coding MGP_BALBcJ_T0030685.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73954225 73968383 + Myo1c protein_coding retained_intron MGP_BALBcJ_T0030686.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73954260 73971432 + MGP_BALBcJ_P0030686 Myo1c protein_coding protein_coding MGP_BALBcJ_T0030687.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73954274 73955725 + MGP_BALBcJ_P0030687 Myo1c protein_coding protein_coding MGP_BALBcJ_T0030688.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73959814 73964730 + Myo1c protein_coding retained_intron MGP_BALBcJ_T0030689.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73964212 73968038 + Myo1c protein_coding retained_intron MGP_BALBcJ_T0030690.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73966889 73969050 + Myo1c protein_coding retained_intron MGP_BALBcJ_T0030691.1 MGP_BALBcJ_G0018660.1 mouse_genomes_project 11 73969071 73970523 + Myo1c protein_coding retained_intron MGP_BALBcJ_T0030586.1 MGP_BALBcJ_G0018640.1 mouse_genomes_project 11 73132803 73174248 - MGP_BALBcJ_P0030586 Sgsm2 protein_coding protein_coding MGP_BALBcJ_T0030587.1 MGP_BALBcJ_G0018640.1 mouse_genomes_project 11 73132808 73174248 - MGP_BALBcJ_P0030587 Sgsm2 protein_coding protein_coding MGP_BALBcJ_T0030588.1 MGP_BALBcJ_G0018640.1 mouse_genomes_project 11 73140364 73144341 - Sgsm2 protein_coding retained_intron MGP_BALBcJ_T0030589.1 MGP_BALBcJ_G0018640.1 mouse_genomes_project 11 73151588 73153252 - Sgsm2 protein_coding retained_intron MGP_BALBcJ_T0030590.1 MGP_BALBcJ_G0018640.1 mouse_genomes_project 11 73151598 73152548 - Sgsm2 protein_coding retained_intron MGP_BALBcJ_T0099243.1 MGP_BALBcJ_G0037279.1 mouse_genomes_project 11 36122840 36122947 - Gm23520 snRNA snRNA MGP_BALBcJ_T0006237.1 MGP_BALBcJ_G0005212.1 mouse_genomes_project 11 68788152 68790687 - Gm12315 lincRNA lincRNA MGP_BALBcJ_T0027938.1 MGP_BALBcJ_G0017963.1 mouse_genomes_project 11 3389248 3393766 + MGP_BALBcJ_P0027938 Ppia protein_coding protein_coding MGP_BALBcJ_T0027939.1 MGP_BALBcJ_G0017963.1 mouse_genomes_project 11 3389673 3392243 + Ppia protein_coding retained_intron MGP_BALBcJ_T0027940.1 MGP_BALBcJ_G0017963.1 mouse_genomes_project 11 3389675 3393764 + Ppia protein_coding processed_transcript MGP_BALBcJ_T0027941.1 MGP_BALBcJ_G0017963.1 mouse_genomes_project 11 3389681 3393546 + Ppia protein_coding retained_intron MGP_BALBcJ_T0027942.1 MGP_BALBcJ_G0017963.1 mouse_genomes_project 11 3389681 3393761 + Ppia protein_coding retained_intron MGP_BALBcJ_T0099273.1 MGP_BALBcJ_G0037309.1 mouse_genomes_project 11 82041664 82041771 + Gm23247 snRNA snRNA MGP_BALBcJ_T0033194.1 MGP_BALBcJ_G0019284.1 mouse_genomes_project 11 109215460 109281833 - MGP_BALBcJ_P0033194 Abca9 protein_coding unknown_likely_coding MGP_BALBcJ_T0033195.1 MGP_BALBcJ_G0019284.1 mouse_genomes_project 11 109216118 109282104 - MGP_BALBcJ_P0033195 Abca9 protein_coding protein_coding MGP_BALBcJ_T0033196.1 MGP_BALBcJ_G0019284.1 mouse_genomes_project 11 109269938 109281963 - Abca9 protein_coding processed_transcript MGP_BALBcJ_T0009675.1 MGP_BALBcJ_G0007800.1 mouse_genomes_project 11 68134078 68134201 + Gm44349 miRNA miRNA MGP_BALBcJ_T0006313.1 MGP_BALBcJ_G0005265.1 mouse_genomes_project 11 101884169 102098742 + Gm26668 lincRNA lincRNA MGP_BALBcJ_T0009636.1 MGP_BALBcJ_G0007761.1 mouse_genomes_project 11 25920822 25920908 + Mir216b miRNA miRNA MGP_BALBcJ_T0009644.1 MGP_BALBcJ_G0007769.1 mouse_genomes_project 11 40696599 40696664 - Mir146 miRNA miRNA MGP_BALBcJ_T0029037.1 MGP_BALBcJ_G0018248.1 mouse_genomes_project 11 51647409 51752736 - MGP_BALBcJ_P0029037 Slc22a21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029038.1 MGP_BALBcJ_G0018248.1 mouse_genomes_project 11 51727764 51763465 - MGP_BALBcJ_P0029038 Slc22a21 protein_coding protein_coding MGP_BALBcJ_T0031412.1 MGP_BALBcJ_G0018838.1 mouse_genomes_project 11 85633188 85642489 - MGP_BALBcJ_P0031412 Smg8 protein_coding protein_coding MGP_BALBcJ_T0031413.1 MGP_BALBcJ_G0018838.1 mouse_genomes_project 11 85633192 85641097 - MGP_BALBcJ_P0031413 Smg8 protein_coding protein_coding MGP_BALBcJ_T0032741.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101781828 101800827 + MGP_BALBcJ_P0032741 Adam11 protein_coding protein_coding MGP_BALBcJ_T0032742.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101781828 101800827 + MGP_BALBcJ_P0032742 Adam11 protein_coding protein_coding MGP_BALBcJ_T0032743.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101782474 101792026 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0032744.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101782571 101792386 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0032745.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101790317 101792319 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0032746.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101792033 101794213 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0032747.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101794632 101796681 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0032748.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101794668 101796958 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0032749.1 MGP_BALBcJ_G0019185.1 mouse_genomes_project 11 101797110 101799024 + Adam11 protein_coding processed_transcript MGP_BALBcJ_T0033944.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119363926 119411282 - MGP_BALBcJ_P0033944 Slc38a10 protein_coding protein_coding MGP_BALBcJ_T0033945.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119364963 119411014 - MGP_BALBcJ_P0033945 Slc38a10 protein_coding protein_coding MGP_BALBcJ_T0033946.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119365587 119366955 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033947.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119365644 119368555 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033948.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119365758 119370413 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033949.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119365771 119370425 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033950.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119365839 119370294 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033951.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119368503 119370305 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033952.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119370970 119411215 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033953.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119378838 119411282 - MGP_BALBcJ_P0033953 Slc38a10 protein_coding protein_coding MGP_BALBcJ_T0033954.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119383812 119411282 - MGP_BALBcJ_P0033954 Slc38a10 protein_coding protein_coding MGP_BALBcJ_T0033955.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119392826 119411256 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033956.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119394759 119411223 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033957.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119397919 119411258 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0033958.1 MGP_BALBcJ_G0019435.1 mouse_genomes_project 11 119399058 119402735 - Slc38a10 protein_coding processed_transcript MGP_BALBcJ_T0006222.1 MGP_BALBcJ_G0005201.1 mouse_genomes_project 11 59868848 59871550 - A530017D24Rik lincRNA lincRNA MGP_BALBcJ_T0006223.1 MGP_BALBcJ_G0005201.1 mouse_genomes_project 11 59869483 59872339 - A530017D24Rik lincRNA lincRNA MGP_BALBcJ_T0003297.1 MGP_BALBcJ_G0003043.1 mouse_genomes_project 11 105073517 105074219 - Gm11646 antisense antisense MGP_BALBcJ_T0099249.1 MGP_BALBcJ_G0037285.1 mouse_genomes_project 11 52263307 52263415 + Gm24198 snRNA snRNA MGP_BALBcJ_T0102161.1 MGP_BALBcJ_G0039978.1 mouse_genomes_project 11 98545645 98545855 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003317.1 MGP_BALBcJ_G0003059.1 mouse_genomes_project 11 108872915 108875190 + Gm11684 antisense antisense MGP_BALBcJ_T0033302.1 MGP_BALBcJ_G0019310.1 mouse_genomes_project 11 114181526 114243603 - MGP_BALBcJ_P0033302 protein_coding protein_coding MGP_BALBcJ_T0030038.1 MGP_BALBcJ_G0018504.1 mouse_genomes_project 11 68028245 68031395 - MGP_BALBcJ_P0030038 Kctd11 protein_coding protein_coding MGP_BALBcJ_T0031223.1 MGP_BALBcJ_G0018791.1 mouse_genomes_project 11 82032244 82042684 - MGP_BALBcJ_P0031223 Heatr9 protein_coding protein_coding MGP_BALBcJ_T0003277.1 MGP_BALBcJ_G0003024.1 mouse_genomes_project 11 99623471 99635412 + Dhx58os antisense antisense MGP_BALBcJ_T0017180.1 MGP_BALBcJ_G0015125.1 mouse_genomes_project 11 81379306 81387906 - Unc45bos processed_transcript processed_transcript MGP_BALBcJ_T0030367.1 MGP_BALBcJ_G0018564.1 mouse_genomes_project 11 69244007 69356006 - MGP_BALBcJ_P0030367 Nlrp1a protein_coding protein_coding MGP_BALBcJ_T0030368.1 MGP_BALBcJ_G0018564.1 mouse_genomes_project 11 69244007 69296134 - MGP_BALBcJ_P0030368 Nlrp1a protein_coding protein_coding MGP_BALBcJ_T0031807.1 MGP_BALBcJ_G0018936.1 mouse_genomes_project 11 94797281 94809964 + MGP_BALBcJ_P0031807 Snf8 protein_coding protein_coding MGP_BALBcJ_T0031808.1 MGP_BALBcJ_G0018936.1 mouse_genomes_project 11 94797352 94806207 + Snf8 protein_coding processed_transcript MGP_BALBcJ_T0031809.1 MGP_BALBcJ_G0018936.1 mouse_genomes_project 11 94797361 94809964 + MGP_BALBcJ_P0031809 Snf8 protein_coding protein_coding MGP_BALBcJ_T0031810.1 MGP_BALBcJ_G0018936.1 mouse_genomes_project 11 94807225 94809964 + Snf8 protein_coding processed_transcript MGP_BALBcJ_T0031811.1 MGP_BALBcJ_G0018936.1 mouse_genomes_project 11 94807359 94809853 + Snf8 protein_coding processed_transcript MGP_BALBcJ_T0033532.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115309470 115324968 - MGP_BALBcJ_P0033532 Unc13d protein_coding protein_coding MGP_BALBcJ_T0033533.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115309471 115325179 - MGP_BALBcJ_P0033533 Unc13d protein_coding protein_coding MGP_BALBcJ_T0033534.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115309471 115325179 - MGP_BALBcJ_P0033534 Unc13d protein_coding protein_coding MGP_BALBcJ_T0033535.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115309929 115324842 - MGP_BALBcJ_P0033535 Unc13d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033536.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115310013 115324808 - MGP_BALBcJ_P0033536 Unc13d protein_coding protein_coding MGP_BALBcJ_T0033537.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115316141 115317702 - Unc13d protein_coding retained_intron MGP_BALBcJ_T0033538.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115322685 115325179 - Unc13d protein_coding processed_transcript MGP_BALBcJ_T0033539.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115323325 115324269 - MGP_BALBcJ_P0033539 Unc13d protein_coding protein_coding MGP_BALBcJ_T0033540.1 MGP_BALBcJ_G0019355.1 mouse_genomes_project 11 115323688 115325159 - MGP_BALBcJ_P0033540 Unc13d protein_coding protein_coding MGP_BALBcJ_T0031558.1 MGP_BALBcJ_G0018878.1 mouse_genomes_project 11 88852171 88910937 + Mmd protein_coding processed_transcript MGP_BALBcJ_T0031559.1 MGP_BALBcJ_G0018878.1 mouse_genomes_project 11 88852171 88913296 + Mmd protein_coding processed_transcript MGP_BALBcJ_T0031560.1 MGP_BALBcJ_G0018878.1 mouse_genomes_project 11 88852173 88890126 + Mmd protein_coding processed_transcript MGP_BALBcJ_T0031561.1 MGP_BALBcJ_G0018878.1 mouse_genomes_project 11 88911496 88931371 + MGP_BALBcJ_P0031561 Mmd protein_coding protein_coding MGP_BALBcJ_T0031562.1 MGP_BALBcJ_G0018878.1 mouse_genomes_project 11 88911516 88941495 + MGP_BALBcJ_P0031562 Mmd protein_coding protein_coding MGP_BALBcJ_T0030546.1 MGP_BALBcJ_G0018626.1 mouse_genomes_project 11 72373314 72374326 + MGP_BALBcJ_P0030546 Olfr402 protein_coding protein_coding MGP_BALBcJ_T0031775.1 MGP_BALBcJ_G0018927.1 mouse_genomes_project 11 94414309 94429240 + MGP_BALBcJ_P0031775 Phb protein_coding protein_coding MGP_BALBcJ_T0031776.1 MGP_BALBcJ_G0018927.1 mouse_genomes_project 11 94414353 94419552 + Phb protein_coding processed_transcript MGP_BALBcJ_T0031777.1 MGP_BALBcJ_G0018927.1 mouse_genomes_project 11 94414363 94416525 + Phb protein_coding processed_transcript MGP_BALBcJ_T0031778.1 MGP_BALBcJ_G0018927.1 mouse_genomes_project 11 94414417 94428175 + MGP_BALBcJ_P0031778 Phb protein_coding protein_coding MGP_BALBcJ_T0031779.1 MGP_BALBcJ_G0018927.1 mouse_genomes_project 11 94419359 94423947 + Phb protein_coding processed_transcript MGP_BALBcJ_T0033574.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115420391 115433109 - Acox1 protein_coding processed_transcript MGP_BALBcJ_T0033575.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115420391 115449862 - MGP_BALBcJ_P0033575 Acox1 protein_coding protein_coding MGP_BALBcJ_T0033576.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115420391 115449618 - MGP_BALBcJ_P0033576 Acox1 protein_coding protein_coding MGP_BALBcJ_T0033577.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115420391 115440420 - MGP_BALBcJ_P0033577 Acox1 protein_coding protein_coding MGP_BALBcJ_T0033578.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115423850 115432360 - Acox1 protein_coding processed_transcript MGP_BALBcJ_T0033579.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115430371 115433259 - Acox1 protein_coding processed_transcript MGP_BALBcJ_T0033580.1 MGP_BALBcJ_G0019361.1 mouse_genomes_project 11 115439873 115449546 - Acox1 protein_coding processed_transcript MGP_BALBcJ_T0033184.1 MGP_BALBcJ_G0019282.1 mouse_genomes_project 11 109044214 109111769 - MGP_BALBcJ_P0033184 Abca8b protein_coding protein_coding MGP_BALBcJ_T0033185.1 MGP_BALBcJ_G0019282.1 mouse_genomes_project 11 109046303 109111667 - MGP_BALBcJ_P0033185 Abca8b protein_coding protein_coding MGP_BALBcJ_T0029274.1 MGP_BALBcJ_G0018330.1 mouse_genomes_project 11 57099887 57107900 - MGP_BALBcJ_P0029274 Guk1 protein_coding protein_coding MGP_BALBcJ_T0029275.1 MGP_BALBcJ_G0018330.1 mouse_genomes_project 11 57100059 57103743 - MGP_BALBcJ_P0029275 Guk1 protein_coding protein_coding MGP_BALBcJ_T0029276.1 MGP_BALBcJ_G0018330.1 mouse_genomes_project 11 57100122 57101457 - Guk1 protein_coding retained_intron MGP_BALBcJ_T0029277.1 MGP_BALBcJ_G0018330.1 mouse_genomes_project 11 57100168 57100861 - Guk1 protein_coding retained_intron MGP_BALBcJ_T0029278.1 MGP_BALBcJ_G0018330.1 mouse_genomes_project 11 57102183 57107760 - Guk1 protein_coding retained_intron MGP_BALBcJ_T0029279.1 MGP_BALBcJ_G0018330.1 mouse_genomes_project 11 57102793 57108172 - MGP_BALBcJ_P0029279 Guk1 protein_coding protein_coding MGP_BALBcJ_T0031288.1 MGP_BALBcJ_G0018812.1 mouse_genomes_project 11 83368651 83376760 - MGP_BALBcJ_P0031288 Dhrs11 protein_coding protein_coding MGP_BALBcJ_T0031289.1 MGP_BALBcJ_G0018812.1 mouse_genomes_project 11 83369787 83376790 - MGP_BALBcJ_P0031289 Dhrs11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099303.1 MGP_BALBcJ_G0037339.1 mouse_genomes_project 11 114836623 114836730 + Gm25364 snRNA snRNA MGP_BALBcJ_T0009674.1 MGP_BALBcJ_G0007799.1 mouse_genomes_project 11 68032020 68032083 - Mir6924 miRNA miRNA MGP_BALBcJ_T0028862.1 MGP_BALBcJ_G0018202.1 mouse_genomes_project 11 48630655 48631597 + MGP_BALBcJ_P0028862 protein_coding protein_coding MGP_BALBcJ_T0030677.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73928001 73946912 + MGP_BALBcJ_P0030677 Inpp5k protein_coding protein_coding MGP_BALBcJ_T0030678.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73928042 73946904 + Inpp5k protein_coding retained_intron MGP_BALBcJ_T0030679.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73928050 73932284 + Inpp5k protein_coding retained_intron MGP_BALBcJ_T0030680.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73928068 73946906 + MGP_BALBcJ_P0030680 Inpp5k protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030681.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73936118 73945316 + Inpp5k protein_coding retained_intron MGP_BALBcJ_T0030682.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73944825 73945771 + Inpp5k protein_coding processed_transcript MGP_BALBcJ_T0030683.1 MGP_BALBcJ_G0018659.1 mouse_genomes_project 11 73944885 73945904 + MGP_BALBcJ_P0030683 Inpp5k protein_coding protein_coding MGP_BALBcJ_T0032097.1 MGP_BALBcJ_G0019009.1 mouse_genomes_project 11 97512412 97528701 + MGP_BALBcJ_P0032097 Gsdma protein_coding protein_coding MGP_BALBcJ_T0098825.1 MGP_BALBcJ_G0036877.1 mouse_genomes_project 11 106549428 106550615 + Gm11722 sense_intronic sense_intronic MGP_BALBcJ_T0003240.1 MGP_BALBcJ_G0002998.1 mouse_genomes_project 11 87547311 87572469 + Scpep1os antisense antisense MGP_BALBcJ_T0017151.1 MGP_BALBcJ_G0015108.1 mouse_genomes_project 11 56150288 56151740 + 1700047K16Rik processed_transcript processed_transcript MGP_BALBcJ_T0031892.1 MGP_BALBcJ_G0018958.1 mouse_genomes_project 11 95731699 95737924 - Pnpo protein_coding processed_transcript MGP_BALBcJ_T0031893.1 MGP_BALBcJ_G0018958.1 mouse_genomes_project 11 95731701 95738013 - MGP_BALBcJ_P0031893 Pnpo protein_coding protein_coding MGP_BALBcJ_T0012481.1 MGP_BALBcJ_G0010578.1 mouse_genomes_project 11 16751415 16752042 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029437.1 MGP_BALBcJ_G0018367.1 mouse_genomes_project 11 58811507 58840506 + MGP_BALBcJ_P0029437 Dhrs7b protein_coding protein_coding MGP_BALBcJ_T0012476.1 MGP_BALBcJ_G0010573.1 mouse_genomes_project 11 15513408 15515163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033658.1 MGP_BALBcJ_G0019378.1 mouse_genomes_project 11 115904647 115919864 + MGP_BALBcJ_P0033658 protein_coding protein_coding MGP_BALBcJ_T0033659.1 MGP_BALBcJ_G0019378.1 mouse_genomes_project 11 115904647 115919569 + MGP_BALBcJ_P0033659 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033660.1 MGP_BALBcJ_G0019378.1 mouse_genomes_project 11 115904968 115919866 + MGP_BALBcJ_P0033660 protein_coding protein_coding MGP_BALBcJ_T0033661.1 MGP_BALBcJ_G0019378.1 mouse_genomes_project 11 115908212 115919864 + MGP_BALBcJ_P0033661 protein_coding protein_coding MGP_BALBcJ_T0033662.1 MGP_BALBcJ_G0019378.1 mouse_genomes_project 11 115908260 115911221 + protein_coding retained_intron MGP_BALBcJ_T0030522.1 MGP_BALBcJ_G0018612.1 mouse_genomes_project 11 71988672 71992874 - MGP_BALBcJ_P0030522 Olfr389 protein_coding protein_coding MGP_BALBcJ_T0030523.1 MGP_BALBcJ_G0018612.1 mouse_genomes_project 11 71988938 71992820 - MGP_BALBcJ_P0030523 Olfr389 protein_coding protein_coding MGP_BALBcJ_T0033204.1 MGP_BALBcJ_G0019287.1 mouse_genomes_project 11 109525948 109655105 + MGP_BALBcJ_P0033204 Map2k6 protein_coding protein_coding MGP_BALBcJ_T0033205.1 MGP_BALBcJ_G0019287.1 mouse_genomes_project 11 109525948 109643216 + MGP_BALBcJ_P0033205 Map2k6 protein_coding protein_coding MGP_BALBcJ_T0033206.1 MGP_BALBcJ_G0019287.1 mouse_genomes_project 11 109526085 109643216 + Map2k6 protein_coding processed_transcript MGP_BALBcJ_T0033207.1 MGP_BALBcJ_G0019287.1 mouse_genomes_project 11 109606950 109629115 + Map2k6 protein_coding processed_transcript MGP_BALBcJ_T0033208.1 MGP_BALBcJ_G0019287.1 mouse_genomes_project 11 109608683 109627520 + Map2k6 protein_coding processed_transcript MGP_BALBcJ_T0102166.1 MGP_BALBcJ_G0039983.1 mouse_genomes_project 11 98876066 98876306 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0030193.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591279 68594642 + Arrb2 protein_coding retained_intron MGP_BALBcJ_T0030194.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591281 68599320 + MGP_BALBcJ_P0030194 Arrb2 protein_coding protein_coding MGP_BALBcJ_T0030195.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591281 68599320 + MGP_BALBcJ_P0030195 Arrb2 protein_coding protein_coding MGP_BALBcJ_T0030196.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591289 68599474 + MGP_BALBcJ_P0030196 Arrb2 protein_coding protein_coding MGP_BALBcJ_T0030197.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591321 68596251 + MGP_BALBcJ_P0030197 Arrb2 protein_coding protein_coding MGP_BALBcJ_T0030198.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591326 68597393 + MGP_BALBcJ_P0030198 Arrb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030199.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68591375 68599449 + MGP_BALBcJ_P0030199 Arrb2 protein_coding protein_coding MGP_BALBcJ_T0030200.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68595344 68598879 + Arrb2 protein_coding retained_intron MGP_BALBcJ_T0030201.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68595548 68597368 + Arrb2 protein_coding retained_intron MGP_BALBcJ_T0030202.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68595937 68598199 + Arrb2 protein_coding retained_intron MGP_BALBcJ_T0030203.1 MGP_BALBcJ_G0018534.1 mouse_genomes_project 11 68597227 68598874 + Arrb2 protein_coding retained_intron MGP_BALBcJ_T0012526.1 MGP_BALBcJ_G0010623.1 mouse_genomes_project 11 27939091 27939829 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029121.1 MGP_BALBcJ_G0018265.1 mouse_genomes_project 11 52910635 52925773 + MGP_BALBcJ_P0029121 Gm2a protein_coding protein_coding MGP_BALBcJ_T0031118.1 MGP_BALBcJ_G0018756.1 mouse_genomes_project 11 79244561 79256725 + MGP_BALBcJ_P0031118 Tmem98 protein_coding protein_coding MGP_BALBcJ_T0032640.1 MGP_BALBcJ_G0019169.1 mouse_genomes_project 11 101251691 101268631 + MGP_BALBcJ_P0032640 BC030867 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032641.1 MGP_BALBcJ_G0019169.1 mouse_genomes_project 11 101251691 101268631 + MGP_BALBcJ_P0032641 BC030867 protein_coding protein_coding MGP_BALBcJ_T0032642.1 MGP_BALBcJ_G0019169.1 mouse_genomes_project 11 101259113 101264074 + BC030867 protein_coding processed_transcript MGP_BALBcJ_T0032643.1 MGP_BALBcJ_G0019169.1 mouse_genomes_project 11 101259117 101264072 + BC030867 protein_coding processed_transcript MGP_BALBcJ_T0032644.1 MGP_BALBcJ_G0019169.1 mouse_genomes_project 11 101265419 101268631 + BC030867 protein_coding processed_transcript MGP_BALBcJ_T0030802.1 MGP_BALBcJ_G0018686.1 mouse_genomes_project 11 75790460 75798509 + MGP_BALBcJ_P0030802 Coro6 protein_coding protein_coding MGP_BALBcJ_T0030803.1 MGP_BALBcJ_G0018686.1 mouse_genomes_project 11 75790694 75791999 + MGP_BALBcJ_P0030803 Coro6 protein_coding protein_coding MGP_BALBcJ_T0030804.1 MGP_BALBcJ_G0018686.1 mouse_genomes_project 11 75791880 75797626 + MGP_BALBcJ_P0030804 Coro6 protein_coding protein_coding MGP_BALBcJ_T0030805.1 MGP_BALBcJ_G0018686.1 mouse_genomes_project 11 75791880 75797626 + MGP_BALBcJ_P0030805 Coro6 protein_coding protein_coding MGP_BALBcJ_T0030806.1 MGP_BALBcJ_G0018686.1 mouse_genomes_project 11 75791955 75797526 + MGP_BALBcJ_P0030806 Coro6 protein_coding protein_coding MGP_BALBcJ_T0030807.1 MGP_BALBcJ_G0018686.1 mouse_genomes_project 11 75791955 75797526 + MGP_BALBcJ_P0030807 Coro6 protein_coding protein_coding MGP_BALBcJ_T0009679.1 MGP_BALBcJ_G0007804.1 mouse_genomes_project 11 68389671 68389765 + Mir195a miRNA miRNA MGP_BALBcJ_T0034024.1 MGP_BALBcJ_G0019450.1 mouse_genomes_project 11 119795132 119803418 + MGP_BALBcJ_P0034024 Gcgr protein_coding protein_coding MGP_BALBcJ_T0034025.1 MGP_BALBcJ_G0019450.1 mouse_genomes_project 11 119795177 119803420 + Gcgr protein_coding processed_transcript MGP_BALBcJ_T0034026.1 MGP_BALBcJ_G0019450.1 mouse_genomes_project 11 119795207 119803417 + Gcgr protein_coding processed_transcript MGP_BALBcJ_T0034027.1 MGP_BALBcJ_G0019450.1 mouse_genomes_project 11 119799113 119801143 + Gcgr protein_coding processed_transcript MGP_BALBcJ_T0099227.1 MGP_BALBcJ_G0037263.1 mouse_genomes_project 11 548877 549006 - Gm26393 snRNA snRNA MGP_BALBcJ_T0006157.1 MGP_BALBcJ_G0005144.1 mouse_genomes_project 11 19486422 19487307 - Gm12050 lincRNA lincRNA MGP_BALBcJ_T0012551.1 MGP_BALBcJ_G0010648.1 mouse_genomes_project 11 40797385 40797675 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012698.1 MGP_BALBcJ_G0010795.1 mouse_genomes_project 11 92361485 92361955 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003152.1 MGP_BALBcJ_G0002926.1 mouse_genomes_project 11 52630000 52635044 + Lyrm7os antisense antisense MGP_BALBcJ_T0012696.1 MGP_BALBcJ_G0010793.1 mouse_genomes_project 11 91454393 91454969 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028024.1 MGP_BALBcJ_G0017986.1 mouse_genomes_project 11 8680143 8750578 + MGP_BALBcJ_P0028024 Ikzf1 protein_coding protein_coding MGP_BALBcJ_T0028025.1 MGP_BALBcJ_G0017986.1 mouse_genomes_project 11 8680143 8704410 + MGP_BALBcJ_P0028025 Ikzf1 protein_coding protein_coding MGP_BALBcJ_T0028026.1 MGP_BALBcJ_G0017986.1 mouse_genomes_project 11 8681065 8768900 + MGP_BALBcJ_P0028026 Ikzf1 protein_coding protein_coding MGP_BALBcJ_T0028027.1 MGP_BALBcJ_G0017986.1 mouse_genomes_project 11 8681353 8769714 + MGP_BALBcJ_P0028027 Ikzf1 protein_coding protein_coding MGP_BALBcJ_T0028028.1 MGP_BALBcJ_G0017986.1 mouse_genomes_project 11 8681369 8757923 + MGP_BALBcJ_P0028028 Ikzf1 protein_coding protein_coding MGP_BALBcJ_T0028029.1 MGP_BALBcJ_G0017986.1 mouse_genomes_project 11 8681585 8766586 + MGP_BALBcJ_P0028029 Ikzf1 protein_coding protein_coding MGP_BALBcJ_T0032489.1 MGP_BALBcJ_G0019141.1 mouse_genomes_project 11 100377844 100389743 - MGP_BALBcJ_P0032489 Aarsd1 protein_coding protein_coding MGP_BALBcJ_T0032491.1 MGP_BALBcJ_G0019141.1 mouse_genomes_project 11 100381809 100389512 - Aarsd1 protein_coding processed_transcript MGP_BALBcJ_T0032492.1 MGP_BALBcJ_G0019141.1 mouse_genomes_project 11 100382410 100389510 - Aarsd1 protein_coding retained_intron MGP_BALBcJ_T0032493.1 MGP_BALBcJ_G0019141.1 mouse_genomes_project 11 100385231 100386739 - Aarsd1 protein_coding retained_intron MGP_BALBcJ_T0032494.1 MGP_BALBcJ_G0019141.1 mouse_genomes_project 11 100388875 100389534 - Aarsd1 protein_coding retained_intron MGP_BALBcJ_T0003259.1 MGP_BALBcJ_G0003011.1 mouse_genomes_project 11 95554933 95556401 + Gm11537 antisense antisense MGP_BALBcJ_T0029764.1 MGP_BALBcJ_G0018440.1 mouse_genomes_project 11 66496654 66562504 + MGP_BALBcJ_P0029764 Pik3r5 protein_coding protein_coding MGP_BALBcJ_T0029765.1 MGP_BALBcJ_G0018440.1 mouse_genomes_project 11 66496658 66541461 + Pik3r5 protein_coding processed_transcript MGP_BALBcJ_T0029766.1 MGP_BALBcJ_G0018440.1 mouse_genomes_project 11 66496693 66504907 + Pik3r5 protein_coding processed_transcript MGP_BALBcJ_T0029767.1 MGP_BALBcJ_G0018440.1 mouse_genomes_project 11 66538491 66560926 + Pik3r5 protein_coding processed_transcript MGP_BALBcJ_T0029768.1 MGP_BALBcJ_G0018440.1 mouse_genomes_project 11 66540177 66558006 + Pik3r5 protein_coding processed_transcript MGP_BALBcJ_T0031178.1 MGP_BALBcJ_G0018776.1 mouse_genomes_project 11 81408469 81409291 + Slfn5 protein_coding processed_transcript MGP_BALBcJ_T0031179.1 MGP_BALBcJ_G0018776.1 mouse_genomes_project 11 81409215 81417666 + MGP_BALBcJ_P0031179 Slfn5 protein_coding protein_coding MGP_BALBcJ_T0031180.1 MGP_BALBcJ_G0018776.1 mouse_genomes_project 11 81409222 81420595 + MGP_BALBcJ_P0031180 Slfn5 protein_coding protein_coding MGP_BALBcJ_T0031181.1 MGP_BALBcJ_G0018776.1 mouse_genomes_project 11 81411767 81419560 + MGP_BALBcJ_P0031181 Slfn5 protein_coding protein_coding MGP_BALBcJ_T0032554.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100760607 100776159 - MGP_BALBcJ_P0032554 Etv4 protein_coding protein_coding MGP_BALBcJ_T0032555.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100760612 100776220 - MGP_BALBcJ_P0032555 Etv4 protein_coding protein_coding MGP_BALBcJ_T0032556.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100760612 100776220 - MGP_BALBcJ_P0032556 Etv4 protein_coding protein_coding MGP_BALBcJ_T0032557.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100761219 100763054 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032558.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100764564 100775710 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032559.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100764703 100776107 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032560.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100764734 100775350 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032561.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100764953 100776071 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032562.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100765040 100776109 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032563.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100765040 100775259 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032564.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100765080 100776159 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0032565.1 MGP_BALBcJ_G0019154.1 mouse_genomes_project 11 100775126 100775697 - Etv4 protein_coding processed_transcript MGP_BALBcJ_T0028861.1 MGP_BALBcJ_G0018201.1 mouse_genomes_project 11 48599387 48600329 + MGP_BALBcJ_P0028861 Olfr54 protein_coding protein_coding MGP_BALBcJ_T0006164.1 MGP_BALBcJ_G0005151.1 mouse_genomes_project 11 21157821 21158630 + Gm12063 lincRNA lincRNA MGP_BALBcJ_T0028927.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644724 49674097 + MGP_BALBcJ_P0028927 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028928.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644724 49678460 + MGP_BALBcJ_P0028928 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028929.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644724 49678460 + MGP_BALBcJ_P0028929 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028930.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644724 49680934 + MGP_BALBcJ_P0028930 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028931.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644724 49725180 + MGP_BALBcJ_P0028931 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028932.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644728 49669159 + MGP_BALBcJ_P0028932 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028933.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644744 49674164 + MGP_BALBcJ_P0028933 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028934.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644757 49660054 + MGP_BALBcJ_P0028934 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028935.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644768 49697744 + MGP_BALBcJ_P0028935 Cdkl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028936.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644792 49730296 + MGP_BALBcJ_P0028936 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028937.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49644793 49678460 + MGP_BALBcJ_P0028937 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028938.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49668159 49725622 + MGP_BALBcJ_P0028938 Cdkl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028939.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49668383 49674019 + MGP_BALBcJ_P0028939 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028940.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49672656 49730291 + MGP_BALBcJ_P0028940 Cdkl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028941.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49672741 49730297 + MGP_BALBcJ_P0028941 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0028942.1 MGP_BALBcJ_G0018220.1 mouse_genomes_project 11 49673821 49730289 + MGP_BALBcJ_P0028942 Cdkl3 protein_coding protein_coding MGP_BALBcJ_T0031743.1 MGP_BALBcJ_G0018919.1 mouse_genomes_project 11 93872123 93877938 - MGP_BALBcJ_P0031743 Dlx4 protein_coding protein_coding MGP_BALBcJ_T0031744.1 MGP_BALBcJ_G0018919.1 mouse_genomes_project 11 93875301 93877476 - Dlx4 protein_coding processed_transcript MGP_BALBcJ_T0028757.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47396888 47436325 + MGP_BALBcJ_P0028757 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0028758.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47396888 47436325 + MGP_BALBcJ_P0028758 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0028759.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47396888 47436325 + MGP_BALBcJ_P0028759 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0028760.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47396890 47436325 + MGP_BALBcJ_P0028760 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0028761.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47396908 47425591 + Mapk9 protein_coding processed_transcript MGP_BALBcJ_T0028762.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47397030 47423362 + Mapk9 protein_coding processed_transcript MGP_BALBcJ_T0028763.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47404357 47436315 + MGP_BALBcJ_P0028763 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0028764.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47404374 47424290 + Mapk9 protein_coding processed_transcript MGP_BALBcJ_T0028765.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47404401 47433214 + MGP_BALBcJ_P0028765 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0028766.1 MGP_BALBcJ_G0018176.1 mouse_genomes_project 11 47404401 47433214 + MGP_BALBcJ_P0028766 Mapk9 protein_coding protein_coding MGP_BALBcJ_T0034117.1 MGP_BALBcJ_G0019467.1 mouse_genomes_project 11 119991339 119993839 + MGP_BALBcJ_P0034117 Rac3 protein_coding protein_coding MGP_BALBcJ_T0034118.1 MGP_BALBcJ_G0019467.1 mouse_genomes_project 11 119991442 119993476 + MGP_BALBcJ_P0034118 Rac3 protein_coding protein_coding MGP_BALBcJ_T0034119.1 MGP_BALBcJ_G0019467.1 mouse_genomes_project 11 119991883 119993435 + Rac3 protein_coding processed_transcript MGP_BALBcJ_T0033255.1 MGP_BALBcJ_G0019298.1 mouse_genomes_project 11 113861333 113865141 + MGP_BALBcJ_P0033255 Rpl38 protein_coding protein_coding MGP_BALBcJ_T0033256.1 MGP_BALBcJ_G0019298.1 mouse_genomes_project 11 113861357 113865141 + MGP_BALBcJ_P0033256 Rpl38 protein_coding protein_coding MGP_BALBcJ_T0033257.1 MGP_BALBcJ_G0019298.1 mouse_genomes_project 11 113861418 113865141 + MGP_BALBcJ_P0033257 Rpl38 protein_coding protein_coding MGP_BALBcJ_T0033258.1 MGP_BALBcJ_G0019298.1 mouse_genomes_project 11 113861435 113865141 + MGP_BALBcJ_P0033258 Rpl38 protein_coding protein_coding MGP_BALBcJ_T0031824.1 MGP_BALBcJ_G0018943.1 mouse_genomes_project 11 95062054 95065334 + MGP_BALBcJ_P0031824 Hoxb8 protein_coding protein_coding MGP_BALBcJ_T0031825.1 MGP_BALBcJ_G0018943.1 mouse_genomes_project 11 95062705 95064334 + MGP_BALBcJ_P0031825 Hoxb8 protein_coding protein_coding MGP_BALBcJ_T0031826.1 MGP_BALBcJ_G0018943.1 mouse_genomes_project 11 95062874 95064712 + MGP_BALBcJ_P0031826 Hoxb8 protein_coding protein_coding MGP_BALBcJ_T0102145.1 MGP_BALBcJ_G0039962.1 mouse_genomes_project 11 72095694 72095735 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003337.1 MGP_BALBcJ_G0003077.1 mouse_genomes_project 11 119193487 119200383 - Gm11767 antisense antisense MGP_BALBcJ_T0100494.1 MGP_BALBcJ_G0038530.1 mouse_genomes_project 11 20240027 20240136 - Gm24398 snoRNA snoRNA MGP_BALBcJ_T0006218.1 MGP_BALBcJ_G0005197.1 mouse_genomes_project 11 57825283 57834394 + Gm12714 lincRNA lincRNA MGP_BALBcJ_T0028671.1 MGP_BALBcJ_G0018145.1 mouse_genomes_project 11 46144139 46155274 - MGP_BALBcJ_P0028671 Trim41 protein_coding protein_coding MGP_BALBcJ_T0028672.1 MGP_BALBcJ_G0018145.1 mouse_genomes_project 11 46146121 46150131 - MGP_BALBcJ_P0028672 Trim41 protein_coding protein_coding MGP_BALBcJ_T0028673.1 MGP_BALBcJ_G0018145.1 mouse_genomes_project 11 46146832 46154874 - MGP_BALBcJ_P0028673 Trim41 protein_coding protein_coding MGP_BALBcJ_T0028674.1 MGP_BALBcJ_G0018145.1 mouse_genomes_project 11 46146934 46153967 - MGP_BALBcJ_P0028674 Trim41 protein_coding protein_coding MGP_BALBcJ_T0012498.1 MGP_BALBcJ_G0010595.1 mouse_genomes_project 11 18932796 18933740 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012459.1 MGP_BALBcJ_G0010556.1 mouse_genomes_project 11 9993281 9993999 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028054.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9238338 9468698 - MGP_BALBcJ_P0028054 Cobl protein_coding protein_coding MGP_BALBcJ_T0028055.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9238406 9468851 - MGP_BALBcJ_P0028055 Cobl protein_coding protein_coding MGP_BALBcJ_T0028056.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9238406 9468753 - MGP_BALBcJ_P0028056 Cobl protein_coding protein_coding MGP_BALBcJ_T0028057.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9238408 9415479 - MGP_BALBcJ_P0028057 Cobl protein_coding protein_coding MGP_BALBcJ_T0028058.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9238408 9468854 - MGP_BALBcJ_P0028058 Cobl protein_coding protein_coding MGP_BALBcJ_T0028059.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9238841 9468694 - MGP_BALBcJ_P0028059 Cobl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028060.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9268648 9372313 - MGP_BALBcJ_P0028060 Cobl protein_coding protein_coding MGP_BALBcJ_T0028061.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9297990 9372261 - MGP_BALBcJ_P0028061 Cobl protein_coding protein_coding MGP_BALBcJ_T0028062.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9306758 9468646 - Cobl protein_coding retained_intron MGP_BALBcJ_T0028063.1 MGP_BALBcJ_G0017990.1 mouse_genomes_project 11 9345621 9381247 - MGP_BALBcJ_P0028063 Cobl protein_coding protein_coding MGP_BALBcJ_T0098469.1 MGP_BALBcJ_G0036523.1 mouse_genomes_project 11 115578899 115579015 - n-R5s74 rRNA rRNA MGP_BALBcJ_T0033657.1 MGP_BALBcJ_G0019377.1 mouse_genomes_project 11 115896403 115905427 - MGP_BALBcJ_P0033657 Cygb protein_coding protein_coding MGP_BALBcJ_T0031159.1 MGP_BALBcJ_G0018772.1 mouse_genomes_project 11 81326781 81343347 - MGP_BALBcJ_P0031159 Rad51d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031160.1 MGP_BALBcJ_G0018772.1 mouse_genomes_project 11 81327046 81343372 - MGP_BALBcJ_P0031160 Rad51d protein_coding protein_coding MGP_BALBcJ_T0031161.1 MGP_BALBcJ_G0018772.1 mouse_genomes_project 11 81329084 81343347 - MGP_BALBcJ_P0031161 Rad51d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031162.1 MGP_BALBcJ_G0018772.1 mouse_genomes_project 11 81329084 81343347 - MGP_BALBcJ_P0031162 Rad51d protein_coding protein_coding MGP_BALBcJ_T0031163.1 MGP_BALBcJ_G0018772.1 mouse_genomes_project 11 81329084 81343347 - MGP_BALBcJ_P0031163 Rad51d protein_coding protein_coding MGP_BALBcJ_T0031164.1 MGP_BALBcJ_G0018772.1 mouse_genomes_project 11 81329084 81343347 - MGP_BALBcJ_P0031164 Rad51d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033989.1 MGP_BALBcJ_G0019444.1 mouse_genomes_project 11 119719463 119720926 - MGP_BALBcJ_P0033989 Oxld1 protein_coding protein_coding MGP_BALBcJ_T0033990.1 MGP_BALBcJ_G0019444.1 mouse_genomes_project 11 119719742 119720794 - MGP_BALBcJ_P0033990 Oxld1 protein_coding protein_coding MGP_BALBcJ_T0030410.1 MGP_BALBcJ_G0018577.1 mouse_genomes_project 11 70528853 70546890 - MGP_BALBcJ_P0030410 Tekt1 protein_coding protein_coding MGP_BALBcJ_T0030411.1 MGP_BALBcJ_G0018577.1 mouse_genomes_project 11 70528853 70546313 - MGP_BALBcJ_P0030411 Tekt1 protein_coding protein_coding MGP_BALBcJ_T0030412.1 MGP_BALBcJ_G0018577.1 mouse_genomes_project 11 70528860 70547459 - MGP_BALBcJ_P0030412 Tekt1 protein_coding protein_coding MGP_BALBcJ_T0032437.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100199481 100201704 + MGP_BALBcJ_P0032437 Ramp2 protein_coding protein_coding MGP_BALBcJ_T0032438.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100199765 100201138 + Ramp2 protein_coding retained_intron MGP_BALBcJ_T0032439.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100199844 100213011 + MGP_BALBcJ_P0032439 Ramp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032440.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100199882 100201704 + MGP_BALBcJ_P0032440 Ramp2 protein_coding protein_coding MGP_BALBcJ_T0032441.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100199885 100201704 + MGP_BALBcJ_P0032441 Ramp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032442.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100200020 100201090 + MGP_BALBcJ_P0032442 Ramp2 protein_coding protein_coding MGP_BALBcJ_T0032443.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100200386 100201704 + Ramp2 protein_coding retained_intron MGP_BALBcJ_T0032444.1 MGP_BALBcJ_G0019130.1 mouse_genomes_project 11 100200546 100201518 + MGP_BALBcJ_P0032444 Ramp2 protein_coding protein_coding MGP_BALBcJ_T0012547.1 MGP_BALBcJ_G0010644.1 mouse_genomes_project 11 37983671 37984017 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029147.1 MGP_BALBcJ_G0018275.1 mouse_genomes_project 11 54823097 55145078 + MGP_BALBcJ_P0029147 Gria1 protein_coding protein_coding MGP_BALBcJ_T0029148.1 MGP_BALBcJ_G0018275.1 mouse_genomes_project 11 54823243 55145077 + MGP_BALBcJ_P0029148 Gria1 protein_coding protein_coding MGP_BALBcJ_T0029149.1 MGP_BALBcJ_G0018275.1 mouse_genomes_project 11 54823321 55142471 + MGP_BALBcJ_P0029149 Gria1 protein_coding protein_coding MGP_BALBcJ_T0029150.1 MGP_BALBcJ_G0018275.1 mouse_genomes_project 11 54992588 55004781 + Gria1 protein_coding processed_transcript MGP_BALBcJ_T0006207.1 MGP_BALBcJ_G0005187.1 mouse_genomes_project 11 43953601 43963027 - Gm4926 lincRNA lincRNA MGP_BALBcJ_T0032846.1 MGP_BALBcJ_G0019207.1 mouse_genomes_project 11 102632149 102639961 - MGP_BALBcJ_P0032846 Lyzl6 protein_coding protein_coding MGP_BALBcJ_T0032847.1 MGP_BALBcJ_G0019207.1 mouse_genomes_project 11 102632152 102639972 - MGP_BALBcJ_P0032847 Lyzl6 protein_coding protein_coding MGP_BALBcJ_T0032848.1 MGP_BALBcJ_G0019207.1 mouse_genomes_project 11 102632155 102636101 - Lyzl6 protein_coding processed_transcript MGP_BALBcJ_T0009634.1 MGP_BALBcJ_G0007759.1 mouse_genomes_project 11 21766906 21767050 - Gm25507 miRNA miRNA MGP_BALBcJ_T0033834.1 MGP_BALBcJ_G0019414.1 mouse_genomes_project 11 118243130 118247776 + MGP_BALBcJ_P0033834 Enpp7 protein_coding protein_coding MGP_BALBcJ_T0033835.1 MGP_BALBcJ_G0019414.1 mouse_genomes_project 11 118243158 118247600 + MGP_BALBcJ_P0033835 Enpp7 protein_coding protein_coding MGP_BALBcJ_T0031977.1 MGP_BALBcJ_G0018979.1 mouse_genomes_project 11 96539203 96569012 - MGP_BALBcJ_P0031977 Pip4k2b protein_coding protein_coding MGP_BALBcJ_T0031978.1 MGP_BALBcJ_G0018979.1 mouse_genomes_project 11 96544430 96550605 - Pip4k2b protein_coding processed_transcript MGP_BALBcJ_T0030997.1 MGP_BALBcJ_G0018726.1 mouse_genomes_project 11 76897233 76910621 - MGP_BALBcJ_P0030997 Tnfaip1 protein_coding protein_coding MGP_BALBcJ_T0030998.1 MGP_BALBcJ_G0018726.1 mouse_genomes_project 11 76897233 76910682 - MGP_BALBcJ_P0030998 Tnfaip1 protein_coding protein_coding MGP_BALBcJ_T0028744.1 MGP_BALBcJ_G0018170.1 mouse_genomes_project 11 47045824 47046869 + MGP_BALBcJ_P0028744 Olfr1384 protein_coding protein_coding MGP_BALBcJ_T0031247.1 MGP_BALBcJ_G0018803.1 mouse_genomes_project 11 82472976 82496499 + MGP_BALBcJ_P0031247 Ddx52 protein_coding protein_coding MGP_BALBcJ_T0031248.1 MGP_BALBcJ_G0018803.1 mouse_genomes_project 11 82477103 82485572 + Ddx52 protein_coding processed_transcript MGP_BALBcJ_T0032520.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528015 100535326 + MGP_BALBcJ_P0032520 Nbr1 protein_coding protein_coding MGP_BALBcJ_T0032521.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528639 100557833 + MGP_BALBcJ_P0032521 Nbr1 protein_coding protein_coding MGP_BALBcJ_T0032522.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528639 100557833 + MGP_BALBcJ_P0032522 Nbr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032523.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528648 100544421 + Nbr1 protein_coding processed_transcript MGP_BALBcJ_T0032524.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528661 100557832 + MGP_BALBcJ_P0032524 Nbr1 protein_coding protein_coding MGP_BALBcJ_T0032525.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528663 100557833 + MGP_BALBcJ_P0032525 Nbr1 protein_coding protein_coding MGP_BALBcJ_T0032526.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100528682 100535325 + MGP_BALBcJ_P0032526 Nbr1 protein_coding protein_coding MGP_BALBcJ_T0032527.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100531650 100535342 + MGP_BALBcJ_P0032527 Nbr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032528.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100531956 100556894 + MGP_BALBcJ_P0032528 Nbr1 protein_coding protein_coding MGP_BALBcJ_T0032529.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100535298 100535361 + Nbr1 protein_coding misc_RNA MGP_BALBcJ_T0032530.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100537565 100541561 + Nbr1 protein_coding retained_intron MGP_BALBcJ_T0032531.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100541812 100544327 + Nbr1 protein_coding retained_intron MGP_BALBcJ_T0032532.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100544174 100545284 + Nbr1 protein_coding retained_intron MGP_BALBcJ_T0032533.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100544567 100545293 + Nbr1 protein_coding processed_transcript MGP_BALBcJ_T0032534.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100548107 100551097 + Nbr1 protein_coding retained_intron MGP_BALBcJ_T0032535.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100550987 100552512 + Nbr1 protein_coding retained_intron MGP_BALBcJ_T0032536.1 MGP_BALBcJ_G0019149.1 mouse_genomes_project 11 100553704 100556670 + Nbr1 protein_coding retained_intron MGP_BALBcJ_T0032549.1 MGP_BALBcJ_G0019153.1 mouse_genomes_project 11 100722575 100725353 + Dhx8 protein_coding retained_intron MGP_BALBcJ_T0032550.1 MGP_BALBcJ_G0019153.1 mouse_genomes_project 11 100722606 100758224 + MGP_BALBcJ_P0032550 Dhx8 protein_coding protein_coding MGP_BALBcJ_T0032551.1 MGP_BALBcJ_G0019153.1 mouse_genomes_project 11 100722685 100724096 + Dhx8 protein_coding retained_intron MGP_BALBcJ_T0032552.1 MGP_BALBcJ_G0019153.1 mouse_genomes_project 11 100722697 100757673 + MGP_BALBcJ_P0032552 Dhx8 protein_coding protein_coding MGP_BALBcJ_T0032553.1 MGP_BALBcJ_G0019153.1 mouse_genomes_project 11 100742489 100743885 + Dhx8 protein_coding retained_intron MGP_BALBcJ_T0011273.1 MGP_BALBcJ_G0009398.1 mouse_genomes_project 11 14561952 14562276 + Gm23959 misc_RNA misc_RNA MGP_BALBcJ_T0032713.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101467363 101484407 - MGP_BALBcJ_P0032713 Itga2b protein_coding protein_coding MGP_BALBcJ_T0032714.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101467370 101470262 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032715.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101469910 101471875 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032716.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101469968 101473120 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032717.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101470543 101481723 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032718.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101471754 101472914 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032719.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101472064 101475390 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032720.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101475767 101476493 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032721.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101480845 101481479 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032722.1 MGP_BALBcJ_G0019179.1 mouse_genomes_project 11 101482323 101484646 - Itga2b protein_coding processed_transcript MGP_BALBcJ_T0032265.1 MGP_BALBcJ_G0019093.1 mouse_genomes_project 11 99276968 99286328 - MGP_BALBcJ_P0032265 Hap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0032266.1 MGP_BALBcJ_G0019093.1 mouse_genomes_project 11 99276974 99285835 - MGP_BALBcJ_P0032266 Hap1 protein_coding protein_coding MGP_BALBcJ_T0032267.1 MGP_BALBcJ_G0019093.1 mouse_genomes_project 11 99278944 99283747 - MGP_BALBcJ_P0032267 Hap1 protein_coding protein_coding MGP_BALBcJ_T0032268.1 MGP_BALBcJ_G0019093.1 mouse_genomes_project 11 99279064 99281613 - MGP_BALBcJ_P0032268 Hap1 protein_coding protein_coding MGP_BALBcJ_T0032269.1 MGP_BALBcJ_G0019093.1 mouse_genomes_project 11 99281963 99285090 - MGP_BALBcJ_P0032269 Hap1 protein_coding protein_coding MGP_BALBcJ_T0034107.1 MGP_BALBcJ_G0019465.1 mouse_genomes_project 11 119980815 119981857 - protein_coding processed_transcript MGP_BALBcJ_T0034108.1 MGP_BALBcJ_G0019465.1 mouse_genomes_project 11 119980815 119983618 - MGP_BALBcJ_P0034108 protein_coding protein_coding MGP_BALBcJ_T0034109.1 MGP_BALBcJ_G0019465.1 mouse_genomes_project 11 119980815 119983612 - MGP_BALBcJ_P0034109 protein_coding protein_coding MGP_BALBcJ_T0034110.1 MGP_BALBcJ_G0019465.1 mouse_genomes_project 11 119980815 119983612 - MGP_BALBcJ_P0034110 protein_coding protein_coding MGP_BALBcJ_T0034111.1 MGP_BALBcJ_G0019465.1 mouse_genomes_project 11 119980816 119983618 - MGP_BALBcJ_P0034111 protein_coding protein_coding MGP_BALBcJ_T0012713.1 MGP_BALBcJ_G0010810.1 mouse_genomes_project 11 98628031 98628184 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030077.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68096182 68101819 - Slc2a4 protein_coding retained_intron MGP_BALBcJ_T0030078.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68097012 68101625 - MGP_BALBcJ_P0030078 Slc2a4 protein_coding protein_coding MGP_BALBcJ_T0030079.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68097435 68101808 - MGP_BALBcJ_P0030079 Slc2a4 protein_coding protein_coding MGP_BALBcJ_T0030080.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68098912 68101618 - MGP_BALBcJ_P0030080 Slc2a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030081.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68098912 68101791 - MGP_BALBcJ_P0030081 Slc2a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030082.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68099206 68101789 - MGP_BALBcJ_P0030082 Slc2a4 protein_coding protein_coding MGP_BALBcJ_T0030083.1 MGP_BALBcJ_G0018511.1 mouse_genomes_project 11 68099712 68101798 - MGP_BALBcJ_P0030083 Slc2a4 protein_coding protein_coding MGP_BALBcJ_T0100540.1 MGP_BALBcJ_G0038576.1 mouse_genomes_project 11 96609842 96609979 - Snora21 snoRNA snoRNA MGP_BALBcJ_T0098821.1 MGP_BALBcJ_G0036874.1 mouse_genomes_project 11 78936895 78938594 - C030013C21Rik sense_intronic sense_intronic MGP_BALBcJ_T0028249.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22670932 22717113 - 5730522E02Rik protein_coding processed_transcript MGP_BALBcJ_T0028250.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22670984 22686439 - 5730522E02Rik protein_coding processed_transcript MGP_BALBcJ_T0028251.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22684025 23280088 - 5730522E02Rik protein_coding processed_transcript MGP_BALBcJ_T0028252.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22685427 23280091 - MGP_BALBcJ_P0028252 5730522E02Rik protein_coding protein_coding MGP_BALBcJ_T0028253.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22701611 22721023 - 5730522E02Rik protein_coding processed_transcript MGP_BALBcJ_T0028254.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22716880 22839466 - MGP_BALBcJ_P0028254 5730522E02Rik protein_coding protein_coding MGP_BALBcJ_T0028255.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 22915913 23146618 - 5730522E02Rik protein_coding processed_transcript MGP_BALBcJ_T0028256.1 MGP_BALBcJ_G0018037.1 mouse_genomes_project 11 23172539 23280282 - 5730522E02Rik protein_coding processed_transcript MGP_BALBcJ_T0030976.1 MGP_BALBcJ_G0018721.1 mouse_genomes_project 11 76846684 76871659 - MGP_BALBcJ_P0030976 Sarm1 protein_coding protein_coding MGP_BALBcJ_T0030977.1 MGP_BALBcJ_G0018721.1 mouse_genomes_project 11 76847567 76858112 - Sarm1 protein_coding retained_intron MGP_BALBcJ_T0030978.1 MGP_BALBcJ_G0018721.1 mouse_genomes_project 11 76847645 76871947 - MGP_BALBcJ_P0030978 Sarm1 protein_coding protein_coding MGP_BALBcJ_T0030979.1 MGP_BALBcJ_G0018721.1 mouse_genomes_project 11 76857147 76861613 - Sarm1 protein_coding retained_intron MGP_BALBcJ_T0030980.1 MGP_BALBcJ_G0018721.1 mouse_genomes_project 11 76865272 76871879 - Sarm1 protein_coding processed_transcript MGP_BALBcJ_T0009739.1 MGP_BALBcJ_G0007864.1 mouse_genomes_project 11 114472087 114472195 + Gm25837 miRNA miRNA MGP_BALBcJ_T0031710.1 MGP_BALBcJ_G0018909.1 mouse_genomes_project 11 93422686 93423896 + MGP_BALBcJ_P0031710 Cdc34b protein_coding protein_coding MGP_BALBcJ_T0031711.1 MGP_BALBcJ_G0018909.1 mouse_genomes_project 11 93422686 93425157 + MGP_BALBcJ_P0031711 Cdc34b protein_coding protein_coding MGP_BALBcJ_T0099240.1 MGP_BALBcJ_G0037276.1 mouse_genomes_project 11 26536302 26536428 + Gm23109 snRNA snRNA MGP_BALBcJ_T0027731.1 MGP_BALBcJ_G0017917.1 mouse_genomes_project 11 1052864 1059406 - Ccdc157 protein_coding processed_transcript MGP_BALBcJ_T0027732.1 MGP_BALBcJ_G0017917.1 mouse_genomes_project 11 1052864 1072642 - MGP_BALBcJ_P0027732 Ccdc157 protein_coding protein_coding MGP_BALBcJ_T0027733.1 MGP_BALBcJ_G0017917.1 mouse_genomes_project 11 1052864 1072644 - MGP_BALBcJ_P0027733 Ccdc157 protein_coding protein_coding MGP_BALBcJ_T0027734.1 MGP_BALBcJ_G0017917.1 mouse_genomes_project 11 1060554 1072569 - Ccdc157 protein_coding processed_transcript MGP_BALBcJ_T0027735.1 MGP_BALBcJ_G0017917.1 mouse_genomes_project 11 1061748 1072569 - Ccdc157 protein_coding processed_transcript MGP_BALBcJ_T0027736.1 MGP_BALBcJ_G0017917.1 mouse_genomes_project 11 1063231 1072603 - Ccdc157 protein_coding processed_transcript MGP_BALBcJ_T0031768.1 MGP_BALBcJ_G0018924.1 mouse_genomes_project 11 94148171 94236375 + MGP_BALBcJ_P0031768 Spop protein_coding protein_coding MGP_BALBcJ_T0031769.1 MGP_BALBcJ_G0018924.1 mouse_genomes_project 11 94148228 94215895 + MGP_BALBcJ_P0031769 Spop protein_coding protein_coding MGP_BALBcJ_T0031770.1 MGP_BALBcJ_G0018924.1 mouse_genomes_project 11 94148317 94215874 + MGP_BALBcJ_P0031770 Spop protein_coding protein_coding MGP_BALBcJ_T0031771.1 MGP_BALBcJ_G0018924.1 mouse_genomes_project 11 94148317 94236375 + MGP_BALBcJ_P0031771 Spop protein_coding protein_coding MGP_BALBcJ_T0031772.1 MGP_BALBcJ_G0018924.1 mouse_genomes_project 11 94215878 94233287 + Spop protein_coding processed_transcript MGP_BALBcJ_T0033686.1 MGP_BALBcJ_G0019384.1 mouse_genomes_project 11 116062137 116064716 + protein_coding retained_intron MGP_BALBcJ_T0033687.1 MGP_BALBcJ_G0019384.1 mouse_genomes_project 11 116062161 116064638 + protein_coding retained_intron MGP_BALBcJ_T0033688.1 MGP_BALBcJ_G0019384.1 mouse_genomes_project 11 116062251 116066965 + MGP_BALBcJ_P0033688 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033689.1 MGP_BALBcJ_G0019384.1 mouse_genomes_project 11 116062267 116068354 + MGP_BALBcJ_P0033689 protein_coding unknown_likely_coding MGP_BALBcJ_T0009666.1 MGP_BALBcJ_G0007791.1 mouse_genomes_project 11 63086274 63086373 - Gm25991 miRNA miRNA MGP_BALBcJ_T0031894.1 MGP_BALBcJ_G0018959.1 mouse_genomes_project 11 95747472 95772929 - MGP_BALBcJ_P0031894 Sp2 protein_coding protein_coding MGP_BALBcJ_T0031895.1 MGP_BALBcJ_G0018959.1 mouse_genomes_project 11 95747473 95772952 - MGP_BALBcJ_P0031895 Sp2 protein_coding protein_coding MGP_BALBcJ_T0031896.1 MGP_BALBcJ_G0018959.1 mouse_genomes_project 11 95747605 95763166 - MGP_BALBcJ_P0031896 Sp2 protein_coding protein_coding MGP_BALBcJ_T0031897.1 MGP_BALBcJ_G0018959.1 mouse_genomes_project 11 95748351 95778213 - MGP_BALBcJ_P0031897 Sp2 protein_coding protein_coding MGP_BALBcJ_T0031723.1 MGP_BALBcJ_G0018913.1 mouse_genomes_project 11 93698381 93699245 + MGP_BALBcJ_P0031723 Hils1 protein_coding protein_coding MGP_BALBcJ_T0012428.1 MGP_BALBcJ_G0010525.1 mouse_genomes_project 11 515814 516186 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032191.1 MGP_BALBcJ_G0019033.1 mouse_genomes_project 11 98259019 98263127 - MGP_BALBcJ_P0032191 Krt10 protein_coding protein_coding MGP_BALBcJ_T0017145.1 MGP_BALBcJ_G0015105.1 mouse_genomes_project 11 48164538 48167689 - Gm12198 processed_transcript processed_transcript MGP_BALBcJ_T0031492.1 MGP_BALBcJ_G0018855.1 mouse_genomes_project 11 86459325 86470566 - MGP_BALBcJ_P0031492 Epx protein_coding protein_coding MGP_BALBcJ_T0031493.1 MGP_BALBcJ_G0018855.1 mouse_genomes_project 11 86464431 86466834 - Epx protein_coding processed_transcript MGP_BALBcJ_T0029564.1 MGP_BALBcJ_G0018390.1 mouse_genomes_project 11 60258599 60276762 + MGP_BALBcJ_P0029564 Adora2b protein_coding protein_coding MGP_BALBcJ_T0012732.1 MGP_BALBcJ_G0010829.1 mouse_genomes_project 11 103830559 103831676 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012480.1 MGP_BALBcJ_G0010577.1 mouse_genomes_project 11 16723688 16724806 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032235.1 MGP_BALBcJ_G0019075.1 mouse_genomes_project 11 98914317 98915078 - MGP_BALBcJ_P0032235 Krtap17-1 protein_coding protein_coding MGP_BALBcJ_T0030513.1 MGP_BALBcJ_G0018606.1 mouse_genomes_project 11 71659794 71663254 - MGP_BALBcJ_P0030513 Olfr380 protein_coding protein_coding MGP_BALBcJ_T0031531.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87475327 87496844 - MGP_BALBcJ_P0031531 Akap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031532.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87475327 87509615 - MGP_BALBcJ_P0031532 Akap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0031533.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87475327 87496844 - MGP_BALBcJ_P0031533 Akap1 protein_coding protein_coding MGP_BALBcJ_T0031534.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87475327 87509641 - MGP_BALBcJ_P0031534 Akap1 protein_coding protein_coding MGP_BALBcJ_T0031535.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87476291 87508772 - MGP_BALBcJ_P0031535 Akap1 protein_coding protein_coding MGP_BALBcJ_T0031536.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87482148 87486674 - Akap1 protein_coding retained_intron MGP_BALBcJ_T0031537.1 MGP_BALBcJ_G0018866.1 mouse_genomes_project 11 87484103 87489700 - MGP_BALBcJ_P0031537 Akap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030641.1 MGP_BALBcJ_G0018651.1 mouse_genomes_project 11 73716068 73724477 - MGP_BALBcJ_P0030641 Serpinf2 protein_coding protein_coding MGP_BALBcJ_T0030642.1 MGP_BALBcJ_G0018651.1 mouse_genomes_project 11 73716072 73725078 - MGP_BALBcJ_P0030642 Serpinf2 protein_coding protein_coding MGP_BALBcJ_T0030643.1 MGP_BALBcJ_G0018651.1 mouse_genomes_project 11 73720246 73725168 - MGP_BALBcJ_P0030643 Serpinf2 protein_coding protein_coding MGP_BALBcJ_T0030644.1 MGP_BALBcJ_G0018651.1 mouse_genomes_project 11 73720765 73725155 - MGP_BALBcJ_P0030644 Serpinf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029290.1 MGP_BALBcJ_G0018336.1 mouse_genomes_project 11 57293302 57296291 - MGP_BALBcJ_P0029290 Prss38 protein_coding protein_coding MGP_BALBcJ_T0031538.1 MGP_BALBcJ_G0018867.1 mouse_genomes_project 11 87559517 87593199 - MGP_BALBcJ_P0031538 Scpep1 protein_coding protein_coding MGP_BALBcJ_T0027687.1 MGP_BALBcJ_G0017905.1 mouse_genomes_project 11 783865 792862 - MGP_BALBcJ_P0027687 4921536K21Rik protein_coding protein_coding MGP_BALBcJ_T0031465.1 MGP_BALBcJ_G0018850.1 mouse_genomes_project 11 86323961 86330279 + MGP_BALBcJ_P0031465 Supt4a protein_coding protein_coding MGP_BALBcJ_T0031466.1 MGP_BALBcJ_G0018850.1 mouse_genomes_project 11 86323961 86330279 + MGP_BALBcJ_P0031466 Supt4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031467.1 MGP_BALBcJ_G0018850.1 mouse_genomes_project 11 86323962 86330279 + MGP_BALBcJ_P0031467 Supt4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012715.1 MGP_BALBcJ_G0010812.1 mouse_genomes_project 11 98757615 98757903 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012747.1 MGP_BALBcJ_G0010844.1 mouse_genomes_project 11 110404056 110404888 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029207.1 MGP_BALBcJ_G0018295.1 mouse_genomes_project 11 56289288 56296055 - MGP_BALBcJ_P0029207 4930504O13Rik protein_coding protein_coding MGP_BALBcJ_T0009700.1 MGP_BALBcJ_G0007825.1 mouse_genomes_project 11 81508206 81508269 - Gm27598 miRNA miRNA MGP_BALBcJ_T0030039.1 MGP_BALBcJ_G0018505.1 mouse_genomes_project 11 68031555 68040298 - MGP_BALBcJ_P0030039 Acap1 protein_coding protein_coding MGP_BALBcJ_T0030040.1 MGP_BALBcJ_G0018505.1 mouse_genomes_project 11 68031555 68046630 - MGP_BALBcJ_P0030040 Acap1 protein_coding protein_coding MGP_BALBcJ_T0030041.1 MGP_BALBcJ_G0018505.1 mouse_genomes_project 11 68031613 68053772 - MGP_BALBcJ_P0030041 Acap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0030042.1 MGP_BALBcJ_G0018505.1 mouse_genomes_project 11 68033471 68038406 - Acap1 protein_coding processed_transcript MGP_BALBcJ_T0030043.1 MGP_BALBcJ_G0018505.1 mouse_genomes_project 11 68039340 68040458 - Acap1 protein_coding processed_transcript MGP_BALBcJ_T0006315.1 MGP_BALBcJ_G0005267.1 mouse_genomes_project 11 106016045 106017071 - Gm11707 lincRNA lincRNA MGP_BALBcJ_T0033793.1 MGP_BALBcJ_G0019406.1 mouse_genomes_project 11 117506682 117537142 - MGP_BALBcJ_P0033793 Usp36 protein_coding protein_coding MGP_BALBcJ_T0033794.1 MGP_BALBcJ_G0019406.1 mouse_genomes_project 11 117506683 117513078 - Usp36 protein_coding retained_intron MGP_BALBcJ_T0033795.1 MGP_BALBcJ_G0019406.1 mouse_genomes_project 11 117507883 117510314 - Usp36 protein_coding retained_intron MGP_BALBcJ_T0033796.1 MGP_BALBcJ_G0019406.1 mouse_genomes_project 11 117530844 117537122 - Usp36 protein_coding retained_intron MGP_BALBcJ_T0000837.1 MGP_BALBcJ_G0000769.1 mouse_genomes_project 11 16002304 16003171 - TEC TEC MGP_BALBcJ_T0017177.1 MGP_BALBcJ_G0015123.1 mouse_genomes_project 11 74096595 74127312 + Gm12339 processed_transcript antisense MGP_BALBcJ_T0017178.1 MGP_BALBcJ_G0015123.1 mouse_genomes_project 11 74097047 74127330 + Gm12339 processed_transcript processed_transcript MGP_BALBcJ_T0006190.1 MGP_BALBcJ_G0005171.1 mouse_genomes_project 11 31422824 31424442 + Gm12121 lincRNA lincRNA MGP_BALBcJ_T0100543.1 MGP_BALBcJ_G0038579.1 mouse_genomes_project 11 97873739 97873861 - Gm23451 snoRNA snoRNA MGP_BALBcJ_T0031048.1 MGP_BALBcJ_G0018742.1 mouse_genomes_project 11 78336322 78366287 - MGP_BALBcJ_P0031048 Utp6 protein_coding protein_coding MGP_BALBcJ_T0031049.1 MGP_BALBcJ_G0018742.1 mouse_genomes_project 11 78337949 78366298 - MGP_BALBcJ_P0031049 Utp6 protein_coding protein_coding MGP_BALBcJ_T0031050.1 MGP_BALBcJ_G0018742.1 mouse_genomes_project 11 78339846 78345894 - Utp6 protein_coding retained_intron MGP_BALBcJ_T0031051.1 MGP_BALBcJ_G0018742.1 mouse_genomes_project 11 78362506 78366275 - Utp6 protein_coding retained_intron MGP_BALBcJ_T0031643.1 MGP_BALBcJ_G0018895.1 mouse_genomes_project 11 92999482 93017702 + MGP_BALBcJ_P0031643 Ankrd40 protein_coding protein_coding MGP_BALBcJ_T0031644.1 MGP_BALBcJ_G0018895.1 mouse_genomes_project 11 92999482 93020039 + MGP_BALBcJ_P0031644 Ankrd40 protein_coding protein_coding MGP_BALBcJ_T0031645.1 MGP_BALBcJ_G0018895.1 mouse_genomes_project 11 93016482 93018341 + Ankrd40 protein_coding retained_intron MGP_BALBcJ_T0012704.1 MGP_BALBcJ_G0010801.1 mouse_genomes_project 11 95583858 95584245 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029655.1 MGP_BALBcJ_G0018409.1 mouse_genomes_project 11 61908253 61944916 - MGP_BALBcJ_P0029655 Hs3st3b1 protein_coding protein_coding MGP_BALBcJ_T0027896.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2930773 3021013 - MGP_BALBcJ_P0027896 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027897.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2930789 2945227 - Camk2b protein_coding processed_transcript MGP_BALBcJ_T0027898.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2930793 3021013 - MGP_BALBcJ_P0027898 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027899.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2930793 3020828 - MGP_BALBcJ_P0027899 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027900.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2932675 3020828 - MGP_BALBcJ_P0027900 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027901.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2932776 3020847 - MGP_BALBcJ_P0027901 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027902.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2932779 3020810 - MGP_BALBcJ_P0027902 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027903.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2932779 3021007 - MGP_BALBcJ_P0027903 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027904.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2932787 3020877 - MGP_BALBcJ_P0027904 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027905.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2932842 3020803 - MGP_BALBcJ_P0027905 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027906.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2933324 3020835 - MGP_BALBcJ_P0027906 Camk2b protein_coding protein_coding MGP_BALBcJ_T0027907.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2949189 3020803 - Camk2b protein_coding processed_transcript MGP_BALBcJ_T0027908.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2951483 2961420 - Camk2b protein_coding processed_transcript MGP_BALBcJ_T0027909.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2953920 3021627 - Camk2b protein_coding processed_transcript MGP_BALBcJ_T0027910.1 MGP_BALBcJ_G0017955.1 mouse_genomes_project 11 2966414 3020923 - Camk2b protein_coding processed_transcript MGP_BALBcJ_T0012571.1 MGP_BALBcJ_G0010668.1 mouse_genomes_project 11 48715413 48716652 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003247.1 MGP_BALBcJ_G0003002.1 mouse_genomes_project 11 94043370 94058139 + Gm11520 antisense antisense MGP_BALBcJ_T0017220.1 MGP_BALBcJ_G0015148.1 mouse_genomes_project 11 102725347 102725930 + Gm11642 processed_transcript processed_transcript MGP_BALBcJ_T0029751.1 MGP_BALBcJ_G0018437.1 mouse_genomes_project 11 65976349 65997344 - Cfap52 protein_coding processed_transcript MGP_BALBcJ_T0029752.1 MGP_BALBcJ_G0018437.1 mouse_genomes_project 11 65976351 66021683 - MGP_BALBcJ_P0029752 Cfap52 protein_coding protein_coding MGP_BALBcJ_T0029753.1 MGP_BALBcJ_G0018437.1 mouse_genomes_project 11 65976496 65982720 - Cfap52 protein_coding processed_transcript MGP_BALBcJ_T0029754.1 MGP_BALBcJ_G0018437.1 mouse_genomes_project 11 65990705 66021692 - MGP_BALBcJ_P0029754 Cfap52 protein_coding protein_coding MGP_BALBcJ_T0032125.1 MGP_BALBcJ_G0019014.1 mouse_genomes_project 11 97620501 97627903 - MGP_BALBcJ_P0032125 Nr1d1 protein_coding protein_coding MGP_BALBcJ_T0032126.1 MGP_BALBcJ_G0019014.1 mouse_genomes_project 11 97621916 97622996 - Nr1d1 protein_coding processed_transcript MGP_BALBcJ_T0012435.1 MGP_BALBcJ_G0010532.1 mouse_genomes_project 11 1846268 1846762 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003312.1 MGP_BALBcJ_G0003057.1 mouse_genomes_project 11 108452786 108463453 - Gm11696 antisense antisense MGP_BALBcJ_T0003313.1 MGP_BALBcJ_G0003057.1 mouse_genomes_project 11 108453715 108454370 - Gm11696 antisense antisense MGP_BALBcJ_T0003314.1 MGP_BALBcJ_G0003057.1 mouse_genomes_project 11 108454722 108463897 - Gm11696 antisense antisense MGP_BALBcJ_T0003315.1 MGP_BALBcJ_G0003057.1 mouse_genomes_project 11 108455069 108463486 - Gm11696 antisense antisense MGP_BALBcJ_T0033104.1 MGP_BALBcJ_G0019264.1 mouse_genomes_project 11 106775885 106789181 - MGP_BALBcJ_P0033104 Cacng1 protein_coding protein_coding MGP_BALBcJ_T0031952.1 MGP_BALBcJ_G0018973.1 mouse_genomes_project 11 96296032 96305585 - MGP_BALBcJ_P0031952 4933428G20Rik protein_coding protein_coding MGP_BALBcJ_T0028518.1 MGP_BALBcJ_G0018103.1 mouse_genomes_project 11 38067680 38101670 - MGP_BALBcJ_P0028518 Hmmr protein_coding protein_coding MGP_BALBcJ_T0028519.1 MGP_BALBcJ_G0018103.1 mouse_genomes_project 11 38087591 38101664 - Hmmr protein_coding processed_transcript MGP_BALBcJ_T0028520.1 MGP_BALBcJ_G0018103.1 mouse_genomes_project 11 38089564 38101664 - Hmmr protein_coding processed_transcript MGP_BALBcJ_T0028521.1 MGP_BALBcJ_G0018103.1 mouse_genomes_project 11 38091435 38101639 - Hmmr protein_coding processed_transcript MGP_BALBcJ_T0009723.1 MGP_BALBcJ_G0007848.1 mouse_genomes_project 11 99407657 99407727 - Mir7116 miRNA miRNA MGP_BALBcJ_T0029441.1 MGP_BALBcJ_G0018369.1 mouse_genomes_project 11 58888832 58904542 - MGP_BALBcJ_P0029441 Natd1 protein_coding protein_coding MGP_BALBcJ_T0029442.1 MGP_BALBcJ_G0018369.1 mouse_genomes_project 11 58892540 58905480 - Natd1 protein_coding processed_transcript MGP_BALBcJ_T0028869.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48892817 48904714 + MGP_BALBcJ_P0028869 Clk4 protein_coding protein_coding MGP_BALBcJ_T0028870.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48892817 48903107 + MGP_BALBcJ_P0028870 Clk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028871.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894201 48913782 + MGP_BALBcJ_P0028871 Clk4 protein_coding protein_coding MGP_BALBcJ_T0028872.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894237 48906347 + MGP_BALBcJ_P0028872 Clk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028873.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894249 48898592 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0028874.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894251 48903452 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0028875.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894256 48904710 + MGP_BALBcJ_P0028875 Clk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028876.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894261 48903148 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0028877.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48894273 48913784 + MGP_BALBcJ_P0028877 Clk4 protein_coding protein_coding MGP_BALBcJ_T0028878.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48903086 48908297 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0028879.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48904538 48913782 + MGP_BALBcJ_P0028879 Clk4 protein_coding protein_coding MGP_BALBcJ_T0028880.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48904699 48907325 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0028881.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48905995 48906600 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0028882.1 MGP_BALBcJ_G0018206.1 mouse_genomes_project 11 48912126 48913218 + Clk4 protein_coding retained_intron MGP_BALBcJ_T0029761.1 MGP_BALBcJ_G0018439.1 mouse_genomes_project 11 66271452 66450742 - MGP_BALBcJ_P0029761 Ntn1 protein_coding protein_coding MGP_BALBcJ_T0029762.1 MGP_BALBcJ_G0018439.1 mouse_genomes_project 11 66271452 66465068 - MGP_BALBcJ_P0029762 Ntn1 protein_coding protein_coding MGP_BALBcJ_T0029763.1 MGP_BALBcJ_G0018439.1 mouse_genomes_project 11 66449559 66450928 - MGP_BALBcJ_P0029763 Ntn1 protein_coding protein_coding MGP_BALBcJ_T0012661.1 MGP_BALBcJ_G0010758.1 mouse_genomes_project 11 76951787 76952906 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027706.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 939766 950756 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027707.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 939769 952022 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027708.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 939916 951642 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027709.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 940086 954404 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027710.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 940086 956083 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027711.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 940086 956083 + MGP_BALBcJ_P0027711 Sec14l4 protein_coding protein_coding MGP_BALBcJ_T0027712.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 940145 954404 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027713.1 MGP_BALBcJ_G0017912.1 mouse_genomes_project 11 950041 954404 + Sec14l4 protein_coding processed_transcript MGP_BALBcJ_T0027859.1 MGP_BALBcJ_G0017944.1 mouse_genomes_project 11 2523749 2649547 + MGP_BALBcJ_P0027859 Ankrd36 protein_coding protein_coding MGP_BALBcJ_T0027860.1 MGP_BALBcJ_G0017944.1 mouse_genomes_project 11 2523762 2538350 + MGP_BALBcJ_P0027860 Ankrd36 protein_coding protein_coding MGP_BALBcJ_T0027861.1 MGP_BALBcJ_G0017944.1 mouse_genomes_project 11 2523882 2615441 + MGP_BALBcJ_P0027861 Ankrd36 protein_coding protein_coding MGP_BALBcJ_T0027862.1 MGP_BALBcJ_G0017944.1 mouse_genomes_project 11 2528148 2538200 + Ankrd36 protein_coding processed_transcript MGP_BALBcJ_T0027863.1 MGP_BALBcJ_G0017944.1 mouse_genomes_project 11 2583009 2599985 + MGP_BALBcJ_P0027863 Ankrd36 protein_coding protein_coding MGP_BALBcJ_T0029932.1 MGP_BALBcJ_G0018477.1 mouse_genomes_project 11 67685073 67687238 - Wrap53 protein_coding processed_transcript MGP_BALBcJ_T0029933.1 MGP_BALBcJ_G0018477.1 mouse_genomes_project 11 67685074 67702640 - MGP_BALBcJ_P0029933 Wrap53 protein_coding protein_coding MGP_BALBcJ_T0029934.1 MGP_BALBcJ_G0018477.1 mouse_genomes_project 11 67701023 67703571 - MGP_BALBcJ_P0029934 Wrap53 protein_coding protein_coding MGP_BALBcJ_T0017210.1 MGP_BALBcJ_G0015139.1 mouse_genomes_project 11 96449462 96466599 - Gm11613 processed_transcript processed_transcript MGP_BALBcJ_T0027747.1 MGP_BALBcJ_G0017920.1 mouse_genomes_project 11 1132185 1136370 + MGP_BALBcJ_P0027747 Gatsl3 protein_coding protein_coding MGP_BALBcJ_T0100541.1 MGP_BALBcJ_G0038577.1 mouse_genomes_project 11 97562451 97562555 - Gm22059 snoRNA snoRNA MGP_BALBcJ_T0029935.1 MGP_BALBcJ_G0018478.1 mouse_genomes_project 11 67703717 67714322 + Trp53 protein_coding processed_transcript MGP_BALBcJ_T0029936.1 MGP_BALBcJ_G0018478.1 mouse_genomes_project 11 67710198 67715696 + MGP_BALBcJ_P0029936 Trp53 protein_coding protein_coding MGP_BALBcJ_T0029937.1 MGP_BALBcJ_G0018478.1 mouse_genomes_project 11 67710198 67715125 + MGP_BALBcJ_P0029937 Trp53 protein_coding protein_coding MGP_BALBcJ_T0029938.1 MGP_BALBcJ_G0018478.1 mouse_genomes_project 11 67712512 67713639 + Trp53 protein_coding processed_transcript MGP_BALBcJ_T0017137.1 MGP_BALBcJ_G0015099.1 mouse_genomes_project 11 26363375 26365993 - A630052C17Rik processed_transcript processed_transcript MGP_BALBcJ_T0032843.1 MGP_BALBcJ_G0019205.1 mouse_genomes_project 11 102382133 102430506 - MGP_BALBcJ_P0032843 Plekhm1 protein_coding protein_coding MGP_BALBcJ_T0032844.1 MGP_BALBcJ_G0019205.1 mouse_genomes_project 11 102384487 102412632 - MGP_BALBcJ_P0032844 Plekhm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012628.1 MGP_BALBcJ_G0010725.1 mouse_genomes_project 11 67756980 67757162 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034218.1 MGP_BALBcJ_G0019491.1 mouse_genomes_project 11 120721156 120736727 + MGP_BALBcJ_P0034218 Fn3k protein_coding protein_coding MGP_BALBcJ_T0034219.1 MGP_BALBcJ_G0019491.1 mouse_genomes_project 11 120721210 120729231 + MGP_BALBcJ_P0034219 Fn3k protein_coding protein_coding MGP_BALBcJ_T0034220.1 MGP_BALBcJ_G0019491.1 mouse_genomes_project 11 120721211 120729755 + MGP_BALBcJ_P0034220 Fn3k protein_coding protein_coding MGP_BALBcJ_T0032501.1 MGP_BALBcJ_G0019144.1 mouse_genomes_project 11 100415193 100418622 + MGP_BALBcJ_P0032501 protein_coding protein_coding MGP_BALBcJ_T0032502.1 MGP_BALBcJ_G0019144.1 mouse_genomes_project 11 100415333 100416830 + protein_coding processed_transcript MGP_BALBcJ_T0032503.1 MGP_BALBcJ_G0019144.1 mouse_genomes_project 11 100415341 100418622 + MGP_BALBcJ_P0032503 protein_coding protein_coding MGP_BALBcJ_T0032504.1 MGP_BALBcJ_G0019144.1 mouse_genomes_project 11 100416507 100418622 + MGP_BALBcJ_P0032504 protein_coding protein_coding MGP_BALBcJ_T0032505.1 MGP_BALBcJ_G0019144.1 mouse_genomes_project 11 100417769 100418622 + protein_coding processed_transcript MGP_BALBcJ_T0032227.1 MGP_BALBcJ_G0019067.1 mouse_genomes_project 11 98783225 98784153 + MGP_BALBcJ_P0032227 protein_coding protein_coding MGP_BALBcJ_T0009703.1 MGP_BALBcJ_G0007828.1 mouse_genomes_project 11 85145485 85145577 - Mir21a miRNA miRNA MGP_BALBcJ_T0033750.1 MGP_BALBcJ_G0019396.1 mouse_genomes_project 11 117052607 117056390 + MGP_BALBcJ_P0033750 Syngr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033751.1 MGP_BALBcJ_G0019396.1 mouse_genomes_project 11 117052610 117057198 + MGP_BALBcJ_P0033751 Syngr2 protein_coding protein_coding MGP_BALBcJ_T0033752.1 MGP_BALBcJ_G0019396.1 mouse_genomes_project 11 117052619 117057207 + MGP_BALBcJ_P0033752 Syngr2 protein_coding protein_coding MGP_BALBcJ_T0033753.1 MGP_BALBcJ_G0019396.1 mouse_genomes_project 11 117055172 117056033 + MGP_BALBcJ_P0033753 Syngr2 protein_coding protein_coding MGP_BALBcJ_T0033754.1 MGP_BALBcJ_G0019396.1 mouse_genomes_project 11 117055905 117056327 + Syngr2 protein_coding retained_intron MGP_BALBcJ_T0003271.1 MGP_BALBcJ_G0003021.1 mouse_genomes_project 11 98294129 98294926 + A830036E02Rik antisense antisense MGP_BALBcJ_T0003272.1 MGP_BALBcJ_G0003021.1 mouse_genomes_project 11 98294416 98300250 + A830036E02Rik antisense antisense MGP_BALBcJ_T0003273.1 MGP_BALBcJ_G0003021.1 mouse_genomes_project 11 98294421 98295469 + A830036E02Rik antisense antisense MGP_BALBcJ_T0003274.1 MGP_BALBcJ_G0003021.1 mouse_genomes_project 11 98297145 98302649 + A830036E02Rik antisense antisense MGP_BALBcJ_T0012482.1 MGP_BALBcJ_G0010579.1 mouse_genomes_project 11 16788652 16789484 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009655.1 MGP_BALBcJ_G0007780.1 mouse_genomes_project 11 51167842 51167913 + Mir6920 miRNA miRNA MGP_BALBcJ_T0012542.1 MGP_BALBcJ_G0010639.1 mouse_genomes_project 11 37086507 37087150 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032419.1 MGP_BALBcJ_G0019126.1 mouse_genomes_project 11 100115719 100124000 - MGP_BALBcJ_P0032419 Plekhh3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032420.1 MGP_BALBcJ_G0019126.1 mouse_genomes_project 11 100115719 100124396 - MGP_BALBcJ_P0032420 Plekhh3 protein_coding protein_coding MGP_BALBcJ_T0032421.1 MGP_BALBcJ_G0019126.1 mouse_genomes_project 11 100115719 100118661 - MGP_BALBcJ_P0032421 Plekhh3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032422.1 MGP_BALBcJ_G0019126.1 mouse_genomes_project 11 100115722 100124362 - MGP_BALBcJ_P0032422 Plekhh3 protein_coding protein_coding MGP_BALBcJ_T0032423.1 MGP_BALBcJ_G0019126.1 mouse_genomes_project 11 100117207 100118365 - Plekhh3 protein_coding processed_transcript MGP_BALBcJ_T0032424.1 MGP_BALBcJ_G0019126.1 mouse_genomes_project 11 100120518 100123399 - MGP_BALBcJ_P0032424 Plekhh3 protein_coding protein_coding MGP_BALBcJ_T0012488.1 MGP_BALBcJ_G0010585.1 mouse_genomes_project 11 17888011 17888218 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028021.1 MGP_BALBcJ_G0017985.1 mouse_genomes_project 11 8456179 8482557 + protein_coding processed_transcript MGP_BALBcJ_T0028022.1 MGP_BALBcJ_G0017985.1 mouse_genomes_project 11 8458339 8508617 + MGP_BALBcJ_P0028022 protein_coding protein_coding MGP_BALBcJ_T0028023.1 MGP_BALBcJ_G0017985.1 mouse_genomes_project 11 8483285 8508615 + MGP_BALBcJ_P0028023 protein_coding protein_coding MGP_BALBcJ_T0003131.1 MGP_BALBcJ_G0002907.1 mouse_genomes_project 11 42025903 42029057 - Gm12158 antisense antisense MGP_BALBcJ_T0099230.1 MGP_BALBcJ_G0037266.1 mouse_genomes_project 11 9065887 9066043 - Gm24036 snRNA snRNA MGP_BALBcJ_T0033748.1 MGP_BALBcJ_G0019394.1 mouse_genomes_project 11 117040564 117050190 + MGP_BALBcJ_P0033748 6030468B19Rik protein_coding protein_coding MGP_BALBcJ_T0033042.1 MGP_BALBcJ_G0019254.1 mouse_genomes_project 11 105815374 105826439 - MGP_BALBcJ_P0033042 Polg2 protein_coding protein_coding MGP_BALBcJ_T0033043.1 MGP_BALBcJ_G0019254.1 mouse_genomes_project 11 105815374 105826461 - MGP_BALBcJ_P0033043 Polg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033044.1 MGP_BALBcJ_G0019254.1 mouse_genomes_project 11 105815854 105826397 - MGP_BALBcJ_P0033044 Polg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033045.1 MGP_BALBcJ_G0019254.1 mouse_genomes_project 11 105818165 105826397 - MGP_BALBcJ_P0033045 Polg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033046.1 MGP_BALBcJ_G0019254.1 mouse_genomes_project 11 105819763 105820972 - Polg2 protein_coding retained_intron MGP_BALBcJ_T0033047.1 MGP_BALBcJ_G0019254.1 mouse_genomes_project 11 105822636 105826426 - MGP_BALBcJ_P0033047 Polg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031690.1 MGP_BALBcJ_G0018903.1 mouse_genomes_project 11 93250237 93254317 + MGP_BALBcJ_P0031690 Chad protein_coding protein_coding MGP_BALBcJ_T0029626.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60770043 60812767 - Zfp286 protein_coding processed_transcript MGP_BALBcJ_T0029627.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60802173 60813249 - MGP_BALBcJ_P0029627 Zfp286 protein_coding protein_coding MGP_BALBcJ_T0029628.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60803391 60813210 - MGP_BALBcJ_P0029628 Zfp286 protein_coding protein_coding MGP_BALBcJ_T0029629.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60804516 60813204 - Zfp286 protein_coding processed_transcript MGP_BALBcJ_T0029630.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60804525 60807938 - Zfp286 protein_coding processed_transcript MGP_BALBcJ_T0029631.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60807302 60813196 - Zfp286 protein_coding processed_transcript MGP_BALBcJ_T0029632.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60807302 60813173 - Zfp286 protein_coding processed_transcript MGP_BALBcJ_T0029633.1 MGP_BALBcJ_G0018402.1 mouse_genomes_project 11 60811361 60813210 - Zfp286 protein_coding processed_transcript MGP_BALBcJ_T0030895.1 MGP_BALBcJ_G0018703.1 mouse_genomes_project 11 76460453 76524721 + MGP_BALBcJ_P0030895 Fam222b protein_coding protein_coding MGP_BALBcJ_T0030896.1 MGP_BALBcJ_G0018703.1 mouse_genomes_project 11 76460501 76524096 + MGP_BALBcJ_P0030896 Fam222b protein_coding protein_coding MGP_BALBcJ_T0030897.1 MGP_BALBcJ_G0018703.1 mouse_genomes_project 11 76482997 76524721 + MGP_BALBcJ_P0030897 Fam222b protein_coding protein_coding MGP_BALBcJ_T0032918.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104198675 104303074 + MGP_BALBcJ_P0032918 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032919.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104200614 104230282 + Tlk2 protein_coding retained_intron MGP_BALBcJ_T0032920.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104201369 104301293 + MGP_BALBcJ_P0032920 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032921.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104201427 104295575 + MGP_BALBcJ_P0032921 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032922.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104201551 104301292 + MGP_BALBcJ_P0032922 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032923.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104201616 104295989 + MGP_BALBcJ_P0032923 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032924.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104201633 104301292 + MGP_BALBcJ_P0032924 Tlk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032925.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104201851 104230985 + MGP_BALBcJ_P0032925 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032926.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104227842 104258478 + Tlk2 protein_coding retained_intron MGP_BALBcJ_T0032927.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104229279 104267316 + MGP_BALBcJ_P0032927 Tlk2 protein_coding protein_coding MGP_BALBcJ_T0032928.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104264587 104265504 + Tlk2 protein_coding retained_intron MGP_BALBcJ_T0032929.1 MGP_BALBcJ_G0019225.1 mouse_genomes_project 11 104271045 104288881 + Tlk2 protein_coding processed_transcript MGP_BALBcJ_T0009671.1 MGP_BALBcJ_G0007796.1 mouse_genomes_project 11 67628059 67628137 - Gm27493 miRNA miRNA MGP_BALBcJ_T0012523.1 MGP_BALBcJ_G0010620.1 mouse_genomes_project 11 27761738 27762697 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012665.1 MGP_BALBcJ_G0010762.1 mouse_genomes_project 11 77863730 77864238 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031039.1 MGP_BALBcJ_G0018740.1 mouse_genomes_project 11 77940551 77944585 - MGP_BALBcJ_P0031039 Evi2a protein_coding protein_coding MGP_BALBcJ_T0031040.1 MGP_BALBcJ_G0018740.1 mouse_genomes_project 11 77940559 77944606 - MGP_BALBcJ_P0031040 Evi2a protein_coding protein_coding MGP_BALBcJ_T0031041.1 MGP_BALBcJ_G0018740.1 mouse_genomes_project 11 77940952 77941771 - MGP_BALBcJ_P0031041 Evi2a protein_coding protein_coding MGP_BALBcJ_T0031042.1 MGP_BALBcJ_G0018740.1 mouse_genomes_project 11 77941680 77942142 - MGP_BALBcJ_P0031042 Evi2a protein_coding protein_coding MGP_BALBcJ_T0031043.1 MGP_BALBcJ_G0018740.1 mouse_genomes_project 11 77942063 77944606 - Evi2a protein_coding processed_transcript MGP_BALBcJ_T0031699.1 MGP_BALBcJ_G0018906.1 mouse_genomes_project 11 93332649 93338971 + MGP_BALBcJ_P0031699 Mrpl27 protein_coding protein_coding MGP_BALBcJ_T0031700.1 MGP_BALBcJ_G0018906.1 mouse_genomes_project 11 93332658 93338800 + Mrpl27 protein_coding processed_transcript MGP_BALBcJ_T0031701.1 MGP_BALBcJ_G0018906.1 mouse_genomes_project 11 93332893 93338503 + Mrpl27 protein_coding processed_transcript MGP_BALBcJ_T0031702.1 MGP_BALBcJ_G0018906.1 mouse_genomes_project 11 93332913 93338599 + Mrpl27 protein_coding processed_transcript MGP_BALBcJ_T0017179.1 MGP_BALBcJ_G0015124.1 mouse_genomes_project 11 76663895 76665004 - Gm11193 processed_transcript processed_transcript MGP_BALBcJ_T0028686.1 MGP_BALBcJ_G0018150.1 mouse_genomes_project 11 46387452 46388289 - MGP_BALBcJ_P0028686 Psme2b protein_coding protein_coding MGP_BALBcJ_T0101610.1 MGP_BALBcJ_G0039629.1 mouse_genomes_project 11 1488982 1490109 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0028109.1 MGP_BALBcJ_G0018004.1 mouse_genomes_project 11 17088725 17143646 - MGP_BALBcJ_P0028109 Actr2 protein_coding protein_coding MGP_BALBcJ_T0028110.1 MGP_BALBcJ_G0018004.1 mouse_genomes_project 11 17104901 17143600 - Actr2 protein_coding processed_transcript MGP_BALBcJ_T0028111.1 MGP_BALBcJ_G0018004.1 mouse_genomes_project 11 17127379 17143642 - Actr2 protein_coding retained_intron MGP_BALBcJ_T0028089.1 MGP_BALBcJ_G0017999.1 mouse_genomes_project 11 14219144 14227265 - MGP_BALBcJ_P0028089 Pno1 protein_coding protein_coding MGP_BALBcJ_T0028090.1 MGP_BALBcJ_G0017999.1 mouse_genomes_project 11 14224545 14226756 - Pno1 protein_coding processed_transcript MGP_BALBcJ_T0012467.1 MGP_BALBcJ_G0010564.1 mouse_genomes_project 11 13447981 13449038 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003148.1 MGP_BALBcJ_G0002923.1 mouse_genomes_project 11 52051648 52058544 + Gm12223 antisense antisense MGP_BALBcJ_T0033648.1 MGP_BALBcJ_G0019375.1 mouse_genomes_project 11 115836782 115847685 + Aanat protein_coding processed_transcript MGP_BALBcJ_T0033649.1 MGP_BALBcJ_G0019375.1 mouse_genomes_project 11 115844046 115847897 + MGP_BALBcJ_P0033649 Aanat protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033650.1 MGP_BALBcJ_G0019375.1 mouse_genomes_project 11 115844046 115848032 + MGP_BALBcJ_P0033650 Aanat protein_coding protein_coding MGP_BALBcJ_T0033651.1 MGP_BALBcJ_G0019375.1 mouse_genomes_project 11 115845933 115847897 + MGP_BALBcJ_P0033651 Aanat protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033652.1 MGP_BALBcJ_G0019375.1 mouse_genomes_project 11 115846128 115846617 + Aanat protein_coding processed_transcript MGP_BALBcJ_T0030023.1 MGP_BALBcJ_G0018500.1 mouse_genomes_project 11 67986921 67988021 + MGP_BALBcJ_P0030023 Tmem256 protein_coding protein_coding MGP_BALBcJ_T0030024.1 MGP_BALBcJ_G0018500.1 mouse_genomes_project 11 67986931 67988026 + MGP_BALBcJ_P0030024 Tmem256 protein_coding protein_coding MGP_BALBcJ_T0030025.1 MGP_BALBcJ_G0018500.1 mouse_genomes_project 11 67986962 67987855 + Tmem256 protein_coding processed_transcript MGP_BALBcJ_T0030026.1 MGP_BALBcJ_G0018500.1 mouse_genomes_project 11 67986970 67988020 + Tmem256 protein_coding processed_transcript MGP_BALBcJ_T0030027.1 MGP_BALBcJ_G0018500.1 mouse_genomes_project 11 67987045 67987981 + Tmem256 protein_coding processed_transcript MGP_BALBcJ_T0012502.1 MGP_BALBcJ_G0010599.1 mouse_genomes_project 11 19815911 19817338 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006201.1 MGP_BALBcJ_G0005182.1 mouse_genomes_project 11 42466037 42480971 - Gm12159 lincRNA lincRNA MGP_BALBcJ_T0033503.1 MGP_BALBcJ_G0019349.1 mouse_genomes_project 11 115155885 115157734 + MGP_BALBcJ_P0033503 Smim6 protein_coding protein_coding MGP_BALBcJ_T0028222.1 MGP_BALBcJ_G0018030.1 mouse_genomes_project 11 20632776 20700496 - MGP_BALBcJ_P0028222 0610010F05Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028223.1 MGP_BALBcJ_G0018030.1 mouse_genomes_project 11 20641046 20700505 - MGP_BALBcJ_P0028223 0610010F05Rik protein_coding protein_coding MGP_BALBcJ_T0028224.1 MGP_BALBcJ_G0018030.1 mouse_genomes_project 11 20644435 20663159 - MGP_BALBcJ_P0028224 0610010F05Rik protein_coding protein_coding MGP_BALBcJ_T0028225.1 MGP_BALBcJ_G0018030.1 mouse_genomes_project 11 20695823 20700578 - MGP_BALBcJ_P0028225 0610010F05Rik protein_coding protein_coding MGP_BALBcJ_T0028493.1 MGP_BALBcJ_G0018097.1 mouse_genomes_project 11 33058600 33080562 + MGP_BALBcJ_P0028493 Pank3 protein_coding protein_coding MGP_BALBcJ_T0032004.1 MGP_BALBcJ_G0018984.1 mouse_genomes_project 11 96668996 96671263 + MGP_BALBcJ_P0032004 B230217C12Rik protein_coding protein_coding MGP_BALBcJ_T0032005.1 MGP_BALBcJ_G0018984.1 mouse_genomes_project 11 96669508 96672324 + B230217C12Rik protein_coding lincRNA MGP_BALBcJ_T0032006.1 MGP_BALBcJ_G0018984.1 mouse_genomes_project 11 96669530 96672042 + B230217C12Rik protein_coding processed_transcript MGP_BALBcJ_T0032007.1 MGP_BALBcJ_G0018984.1 mouse_genomes_project 11 96669534 96671263 + B230217C12Rik protein_coding processed_transcript MGP_BALBcJ_T0012685.1 MGP_BALBcJ_G0010782.1 mouse_genomes_project 11 85870478 85870750 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030180.1 MGP_BALBcJ_G0018529.1 mouse_genomes_project 11 68392750 68394407 - MGP_BALBcJ_P0030180 Rnasek protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030181.1 MGP_BALBcJ_G0018529.1 mouse_genomes_project 11 68392750 68394469 - MGP_BALBcJ_P0030181 Rnasek protein_coding protein_coding MGP_BALBcJ_T0030182.1 MGP_BALBcJ_G0018529.1 mouse_genomes_project 11 68392753 68393685 - MGP_BALBcJ_P0030182 Rnasek protein_coding protein_coding MGP_BALBcJ_T0031317.1 MGP_BALBcJ_G0018817.1 mouse_genomes_project 11 83511044 83515810 + Car4 protein_coding retained_intron MGP_BALBcJ_T0031318.1 MGP_BALBcJ_G0018817.1 mouse_genomes_project 11 83511046 83519299 + MGP_BALBcJ_P0031318 Car4 protein_coding protein_coding MGP_BALBcJ_T0031319.1 MGP_BALBcJ_G0018817.1 mouse_genomes_project 11 83511069 83515173 + Car4 protein_coding processed_transcript MGP_BALBcJ_T0031320.1 MGP_BALBcJ_G0018817.1 mouse_genomes_project 11 83511083 83517818 + MGP_BALBcJ_P0031320 Car4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031321.1 MGP_BALBcJ_G0018817.1 mouse_genomes_project 11 83511362 83517483 + MGP_BALBcJ_P0031321 Car4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031322.1 MGP_BALBcJ_G0018817.1 mouse_genomes_project 11 83517601 83519299 + MGP_BALBcJ_P0031322 Car4 protein_coding protein_coding MGP_BALBcJ_T0030032.1 MGP_BALBcJ_G0018502.1 mouse_genomes_project 11 67999587 68007274 - MGP_BALBcJ_P0030032 Tnk1 protein_coding protein_coding MGP_BALBcJ_T0030033.1 MGP_BALBcJ_G0018502.1 mouse_genomes_project 11 67999801 68005636 - MGP_BALBcJ_P0030033 Tnk1 protein_coding protein_coding MGP_BALBcJ_T0030034.1 MGP_BALBcJ_G0018502.1 mouse_genomes_project 11 68000657 68004149 - MGP_BALBcJ_P0030034 Tnk1 protein_coding protein_coding MGP_BALBcJ_T0030035.1 MGP_BALBcJ_G0018502.1 mouse_genomes_project 11 68003064 68007274 - MGP_BALBcJ_P0030035 Tnk1 protein_coding protein_coding MGP_BALBcJ_T0030036.1 MGP_BALBcJ_G0018502.1 mouse_genomes_project 11 68004127 68007252 - MGP_BALBcJ_P0030036 Tnk1 protein_coding protein_coding MGP_BALBcJ_T0100501.1 MGP_BALBcJ_G0038537.1 mouse_genomes_project 11 32501037 32501174 + Gm26070 snoRNA snoRNA MGP_BALBcJ_T0029323.1 MGP_BALBcJ_G0018345.1 mouse_genomes_project 11 57708413 57712162 - Pld6 protein_coding processed_transcript MGP_BALBcJ_T0029324.1 MGP_BALBcJ_G0018345.1 mouse_genomes_project 11 57709219 57712159 - MGP_BALBcJ_P0029324 Pld6 protein_coding protein_coding MGP_BALBcJ_T0032026.1 MGP_BALBcJ_G0018990.1 mouse_genomes_project 11 96868165 96886065 - MGP_BALBcJ_P0032026 Stac2 protein_coding protein_coding MGP_BALBcJ_T0032027.1 MGP_BALBcJ_G0018990.1 mouse_genomes_project 11 96871640 96875060 - MGP_BALBcJ_P0032027 Stac2 protein_coding protein_coding MGP_BALBcJ_T0027946.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3496225 3510623 - MGP_BALBcJ_P0027946 Myo1g protein_coding protein_coding MGP_BALBcJ_T0027947.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3496351 3510562 - MGP_BALBcJ_P0027947 Myo1g protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027948.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3497546 3498363 - Myo1g protein_coding retained_intron MGP_BALBcJ_T0027949.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3502641 3510623 - Myo1g protein_coding retained_intron MGP_BALBcJ_T0027950.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3504180 3505178 - Myo1g protein_coding retained_intron MGP_BALBcJ_T0027951.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3507679 3510630 - MGP_BALBcJ_P0027951 Myo1g protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027952.1 MGP_BALBcJ_G0017966.1 mouse_genomes_project 11 3508731 3509189 - MGP_BALBcJ_P0027952 Myo1g protein_coding protein_coding MGP_BALBcJ_T0029162.1 MGP_BALBcJ_G0018280.1 mouse_genomes_project 11 55642048 55646155 - MGP_BALBcJ_P0029162 Hand1 protein_coding protein_coding MGP_BALBcJ_T0029163.1 MGP_BALBcJ_G0018280.1 mouse_genomes_project 11 55642050 55645496 - MGP_BALBcJ_P0029163 Hand1 protein_coding protein_coding MGP_BALBcJ_T0029164.1 MGP_BALBcJ_G0018280.1 mouse_genomes_project 11 55645042 55646155 - MGP_BALBcJ_P0029164 Hand1 protein_coding protein_coding MGP_BALBcJ_T0017165.1 MGP_BALBcJ_G0015116.1 mouse_genomes_project 11 65973052 65999536 + 9130017K11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017166.1 MGP_BALBcJ_G0015116.1 mouse_genomes_project 11 65973924 65975341 + 9130017K11Rik processed_transcript processed_transcript MGP_BALBcJ_T0028533.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39442735 39494945 - MGP_BALBcJ_P0028533 Gabra1 protein_coding protein_coding MGP_BALBcJ_T0028534.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39442735 39494178 - MGP_BALBcJ_P0028534 Gabra1 protein_coding protein_coding MGP_BALBcJ_T0028535.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39447540 39491992 - MGP_BALBcJ_P0028535 Gabra1 protein_coding protein_coding MGP_BALBcJ_T0028536.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39466992 39492105 - MGP_BALBcJ_P0028536 Gabra1 protein_coding protein_coding MGP_BALBcJ_T0028537.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39488132 39494945 - MGP_BALBcJ_P0028537 Gabra1 protein_coding protein_coding MGP_BALBcJ_T0028538.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39489438 39494475 - Gabra1 protein_coding processed_transcript MGP_BALBcJ_T0028539.1 MGP_BALBcJ_G0018107.1 mouse_genomes_project 11 39491708 39494925 - MGP_BALBcJ_P0028539 Gabra1 protein_coding protein_coding MGP_BALBcJ_T0012607.1 MGP_BALBcJ_G0010704.1 mouse_genomes_project 11 58382873 58383634 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032620.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101196394 101232416 - MGP_BALBcJ_P0032620 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032621.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197706 101232374 - MGP_BALBcJ_P0032621 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032622.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197709 101199148 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032623.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197711 101199831 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032624.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197711 101221179 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032625.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197711 101198521 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032626.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197711 101232389 - MGP_BALBcJ_P0032626 Hdac5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032627.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197711 101198531 - MGP_BALBcJ_P0032627 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032628.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197713 101232416 - MGP_BALBcJ_P0032628 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032629.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101197713 101232386 - MGP_BALBcJ_P0032629 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032630.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101198199 101200042 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032631.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101198643 101200858 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032632.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101200641 101201456 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032633.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101200926 101202320 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032634.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101201352 101202779 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032635.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101207852 101232392 - MGP_BALBcJ_P0032635 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032636.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101208593 101221178 - MGP_BALBcJ_P0032636 Hdac5 protein_coding protein_coding MGP_BALBcJ_T0032637.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101208969 101221179 - Hdac5 protein_coding retained_intron MGP_BALBcJ_T0032638.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101220960 101232383 - Hdac5 protein_coding processed_transcript MGP_BALBcJ_T0032639.1 MGP_BALBcJ_G0019168.1 mouse_genomes_project 11 101221402 101232396 - Hdac5 protein_coding processed_transcript MGP_BALBcJ_T0100553.1 MGP_BALBcJ_G0038589.1 mouse_genomes_project 11 120321745 120321870 + Gm22152 snoRNA snoRNA MGP_BALBcJ_T0031007.1 MGP_BALBcJ_G0018730.1 mouse_genomes_project 11 77221099 77241401 + MGP_BALBcJ_P0031007 Lyrm9 protein_coding protein_coding MGP_BALBcJ_T0031008.1 MGP_BALBcJ_G0018730.1 mouse_genomes_project 11 77221119 77232800 + MGP_BALBcJ_P0031008 Lyrm9 protein_coding protein_coding MGP_BALBcJ_T0031009.1 MGP_BALBcJ_G0018730.1 mouse_genomes_project 11 77221144 77233819 + Lyrm9 protein_coding processed_transcript MGP_BALBcJ_T0032418.1 MGP_BALBcJ_G0019125.1 mouse_genomes_project 11 100108560 100114828 + MGP_BALBcJ_P0032418 Tubg2 protein_coding protein_coding MGP_BALBcJ_T0017190.1 MGP_BALBcJ_G0015129.1 mouse_genomes_project 11 84347209 84388877 - 2610027K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017191.1 MGP_BALBcJ_G0015129.1 mouse_genomes_project 11 84351337 84388891 - 2610027K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017192.1 MGP_BALBcJ_G0015129.1 mouse_genomes_project 11 84351423 84359652 - 2610027K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0033824.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117738623 118163064 - MGP_BALBcJ_P0033824 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033825.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117738625 118011508 - MGP_BALBcJ_P0033825 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033826.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117740016 118163069 - MGP_BALBcJ_P0033826 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033827.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117740016 118165077 - MGP_BALBcJ_P0033827 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033828.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117740064 118163064 - MGP_BALBcJ_P0033828 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033829.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117740855 118163066 - MGP_BALBcJ_P0033829 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033830.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117745358 117756211 - MGP_BALBcJ_P0033830 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033831.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 117751699 117819021 - MGP_BALBcJ_P0033831 Rbfox3 protein_coding protein_coding MGP_BALBcJ_T0033832.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 118063855 118142207 - Rbfox3 protein_coding processed_transcript MGP_BALBcJ_T0033833.1 MGP_BALBcJ_G0019413.1 mouse_genomes_project 11 118063857 118161519 - Rbfox3 protein_coding processed_transcript MGP_BALBcJ_T0031235.1 MGP_BALBcJ_G0018799.1 mouse_genomes_project 11 82239646 82241980 + MGP_BALBcJ_P0031235 Wfdc18 protein_coding protein_coding MGP_BALBcJ_T0031236.1 MGP_BALBcJ_G0018799.1 mouse_genomes_project 11 82239754 82241971 + MGP_BALBcJ_P0031236 Wfdc18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031237.1 MGP_BALBcJ_G0018799.1 mouse_genomes_project 11 82239756 82241330 + Wfdc18 protein_coding retained_intron MGP_BALBcJ_T0012627.1 MGP_BALBcJ_G0010724.1 mouse_genomes_project 11 67756382 67756771 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028134.1 MGP_BALBcJ_G0018011.1 mouse_genomes_project 11 18132553 18183504 + Peli1 protein_coding retained_intron MGP_BALBcJ_T0028135.1 MGP_BALBcJ_G0018011.1 mouse_genomes_project 11 18132553 18191374 + MGP_BALBcJ_P0028135 Peli1 protein_coding protein_coding MGP_BALBcJ_T0028136.1 MGP_BALBcJ_G0018011.1 mouse_genomes_project 11 18133380 18190453 + Peli1 protein_coding retained_intron MGP_BALBcJ_T0028137.1 MGP_BALBcJ_G0018011.1 mouse_genomes_project 11 18176252 18191374 + MGP_BALBcJ_P0028137 Peli1 protein_coding protein_coding MGP_BALBcJ_T0012689.1 MGP_BALBcJ_G0010786.1 mouse_genomes_project 11 86962503 86962828 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031132.1 MGP_BALBcJ_G0018765.1 mouse_genomes_project 11 80551471 80553086 + MGP_BALBcJ_P0031132 Ccl8 protein_coding protein_coding MGP_BALBcJ_T0029869.1 MGP_BALBcJ_G0018459.1 mouse_genomes_project 11 67233060 67235596 - MGP_BALBcJ_P0029869 9130213A22Rik protein_coding protein_coding MGP_BALBcJ_T0006145.1 MGP_BALBcJ_G0005133.1 mouse_genomes_project 11 4251113 4271683 - Gm11986 lincRNA lincRNA MGP_BALBcJ_T0006296.1 MGP_BALBcJ_G0005254.1 mouse_genomes_project 11 94445502 94447468 - Gm9796 lincRNA lincRNA MGP_BALBcJ_T0033979.1 MGP_BALBcJ_G0019441.1 mouse_genomes_project 11 119639967 119700071 - MGP_BALBcJ_P0033979 Nploc4 protein_coding protein_coding MGP_BALBcJ_T0033980.1 MGP_BALBcJ_G0019441.1 mouse_genomes_project 11 119639967 119700071 - MGP_BALBcJ_P0033980 Nploc4 protein_coding protein_coding MGP_BALBcJ_T0033981.1 MGP_BALBcJ_G0019441.1 mouse_genomes_project 11 119641915 119643101 - Nploc4 protein_coding processed_transcript MGP_BALBcJ_T0033982.1 MGP_BALBcJ_G0019441.1 mouse_genomes_project 11 119665901 119683920 - Nploc4 protein_coding processed_transcript MGP_BALBcJ_T0033983.1 MGP_BALBcJ_G0019441.1 mouse_genomes_project 11 119675287 119679111 - Nploc4 protein_coding processed_transcript MGP_BALBcJ_T0031390.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85145283 85245318 - MGP_BALBcJ_P0031390 Vmp1 protein_coding protein_coding MGP_BALBcJ_T0031391.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85146348 85163572 - Vmp1 protein_coding processed_transcript MGP_BALBcJ_T0031392.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85146438 85148413 - Vmp1 protein_coding processed_transcript MGP_BALBcJ_T0031393.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85146687 85148300 - Vmp1 protein_coding processed_transcript MGP_BALBcJ_T0031394.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85146690 85163604 - Vmp1 protein_coding processed_transcript MGP_BALBcJ_T0031395.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85204242 85224735 - Vmp1 protein_coding processed_transcript MGP_BALBcJ_T0031396.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85225715 85245303 - Vmp1 protein_coding processed_transcript MGP_BALBcJ_T0031397.1 MGP_BALBcJ_G0018832.1 mouse_genomes_project 11 85225815 85232331 - MGP_BALBcJ_P0031397 Vmp1 protein_coding protein_coding MGP_BALBcJ_T0033896.1 MGP_BALBcJ_G0019427.1 mouse_genomes_project 11 118799849 118808884 - MGP_BALBcJ_P0033896 Nptx1 protein_coding protein_coding MGP_BALBcJ_T0100530.1 MGP_BALBcJ_G0038566.1 mouse_genomes_project 11 76549690 76549761 - Snord4a snoRNA snoRNA MGP_BALBcJ_T0003349.1 MGP_BALBcJ_G0003085.1 mouse_genomes_project 11 120103237 120106459 + Gm11773 antisense antisense MGP_BALBcJ_T0006352.1 MGP_BALBcJ_G0005296.1 mouse_genomes_project 11 118477895 118480480 + Gm11752 lincRNA lincRNA MGP_BALBcJ_T0003322.1 MGP_BALBcJ_G0003063.1 mouse_genomes_project 11 114627046 114628917 - Ict1os antisense antisense MGP_BALBcJ_T0028743.1 MGP_BALBcJ_G0018169.1 mouse_genomes_project 11 47024179 47028766 + MGP_BALBcJ_P0028743 protein_coding protein_coding MGP_BALBcJ_T0032459.1 MGP_BALBcJ_G0019134.1 mouse_genomes_project 11 100232950 100240430 + Cntd1 protein_coding processed_transcript MGP_BALBcJ_T0032460.1 MGP_BALBcJ_G0019134.1 mouse_genomes_project 11 100233034 100242586 + MGP_BALBcJ_P0032460 Cntd1 protein_coding protein_coding MGP_BALBcJ_T0032461.1 MGP_BALBcJ_G0019134.1 mouse_genomes_project 11 100239939 100250202 + Cntd1 protein_coding processed_transcript MGP_BALBcJ_T0028148.1 MGP_BALBcJ_G0018014.1 mouse_genomes_project 11 18617158 18633154 - MGP_BALBcJ_P0028148 Mdh1 protein_coding protein_coding MGP_BALBcJ_T0028149.1 MGP_BALBcJ_G0018014.1 mouse_genomes_project 11 18618861 18620101 - Mdh1 protein_coding processed_transcript MGP_BALBcJ_T0028150.1 MGP_BALBcJ_G0018014.1 mouse_genomes_project 11 18619893 18624580 - Mdh1 protein_coding processed_transcript MGP_BALBcJ_T0028151.1 MGP_BALBcJ_G0018014.1 mouse_genomes_project 11 18623267 18633328 - MGP_BALBcJ_P0028151 Mdh1 protein_coding protein_coding MGP_BALBcJ_T0032977.1 MGP_BALBcJ_G0019239.1 mouse_genomes_project 11 105224455 105244384 - MGP_BALBcJ_P0032977 Ccdc47 protein_coding protein_coding MGP_BALBcJ_T0032978.1 MGP_BALBcJ_G0019239.1 mouse_genomes_project 11 105227826 105231476 - MGP_BALBcJ_P0032978 Ccdc47 protein_coding protein_coding MGP_BALBcJ_T0032979.1 MGP_BALBcJ_G0019239.1 mouse_genomes_project 11 105228665 105232484 - MGP_BALBcJ_P0032979 Ccdc47 protein_coding protein_coding MGP_BALBcJ_T0032980.1 MGP_BALBcJ_G0019239.1 mouse_genomes_project 11 105229052 105229953 - MGP_BALBcJ_P0032980 Ccdc47 protein_coding protein_coding MGP_BALBcJ_T0032981.1 MGP_BALBcJ_G0019239.1 mouse_genomes_project 11 105231340 105232591 - Ccdc47 protein_coding processed_transcript MGP_BALBcJ_T0006277.1 MGP_BALBcJ_G0005241.1 mouse_genomes_project 11 86661396 86670017 - 2010015M23Rik lincRNA lincRNA MGP_BALBcJ_T0012430.1 MGP_BALBcJ_G0010527.1 mouse_genomes_project 11 524063 524494 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033614.1 MGP_BALBcJ_G0019369.1 mouse_genomes_project 11 115683509 115688341 + MGP_BALBcJ_P0033614 Ubald2 protein_coding protein_coding MGP_BALBcJ_T0033616.1 MGP_BALBcJ_G0019369.1 mouse_genomes_project 11 115683781 115687489 + Ubald2 protein_coding processed_transcript MGP_BALBcJ_T0012473.1 MGP_BALBcJ_G0010570.1 mouse_genomes_project 11 14653243 14653925 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031073.1 MGP_BALBcJ_G0018748.1 mouse_genomes_project 11 78595525 78610669 + MGP_BALBcJ_P0031073 Rnf135 protein_coding protein_coding MGP_BALBcJ_T0031074.1 MGP_BALBcJ_G0018748.1 mouse_genomes_project 11 78595897 78600270 + Rnf135 protein_coding processed_transcript MGP_BALBcJ_T0012561.1 MGP_BALBcJ_G0010658.1 mouse_genomes_project 11 45905389 45906050 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009628.1 MGP_BALBcJ_G0007753.1 mouse_genomes_project 11 3446687 3446740 - Gm22123 miRNA miRNA MGP_BALBcJ_T0012533.1 MGP_BALBcJ_G0010630.1 mouse_genomes_project 11 30137232 30137812 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029529.1 MGP_BALBcJ_G0018384.1 mouse_genomes_project 11 59674708 59723292 - Slc5a10 protein_coding processed_transcript MGP_BALBcJ_T0029530.1 MGP_BALBcJ_G0018384.1 mouse_genomes_project 11 59674709 59722412 - MGP_BALBcJ_P0029530 Slc5a10 protein_coding protein_coding MGP_BALBcJ_T0029531.1 MGP_BALBcJ_G0018384.1 mouse_genomes_project 11 59674709 59723265 - MGP_BALBcJ_P0029531 Slc5a10 protein_coding protein_coding MGP_BALBcJ_T0029532.1 MGP_BALBcJ_G0018384.1 mouse_genomes_project 11 59674719 59722463 - MGP_BALBcJ_P0029532 Slc5a10 protein_coding protein_coding MGP_BALBcJ_T0032182.1 MGP_BALBcJ_G0019027.1 mouse_genomes_project 11 98092634 98103995 - MGP_BALBcJ_P0032182 Krt222 protein_coding protein_coding MGP_BALBcJ_T0032183.1 MGP_BALBcJ_G0019027.1 mouse_genomes_project 11 98093763 98104013 - MGP_BALBcJ_P0032183 Krt222 protein_coding protein_coding MGP_BALBcJ_T0032184.1 MGP_BALBcJ_G0019027.1 mouse_genomes_project 11 98094824 98098770 - Krt222 protein_coding processed_transcript MGP_BALBcJ_T0030506.1 MGP_BALBcJ_G0018602.1 mouse_genomes_project 11 71563664 71567675 + MGP_BALBcJ_P0030506 Olfr20 protein_coding protein_coding MGP_BALBcJ_T0030507.1 MGP_BALBcJ_G0018602.1 mouse_genomes_project 11 71566566 71567627 + MGP_BALBcJ_P0030507 Olfr20 protein_coding protein_coding MGP_BALBcJ_T0100488.1 MGP_BALBcJ_G0038524.1 mouse_genomes_project 11 9670034 9670176 + Gm22156 snoRNA snoRNA MGP_BALBcJ_T0012693.1 MGP_BALBcJ_G0010790.1 mouse_genomes_project 11 89527734 89529316 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030535.1 MGP_BALBcJ_G0018621.1 mouse_genomes_project 11 72203830 72210674 - MGP_BALBcJ_P0030535 Olfr398 protein_coding protein_coding MGP_BALBcJ_T0030536.1 MGP_BALBcJ_G0018621.1 mouse_genomes_project 11 72203830 72204775 - MGP_BALBcJ_P0030536 Olfr398 protein_coding protein_coding MGP_BALBcJ_T0032646.1 MGP_BALBcJ_G0019171.1 mouse_genomes_project 11 101289676 101293981 + MGP_BALBcJ_P0032646 Tmub2 protein_coding protein_coding MGP_BALBcJ_T0032647.1 MGP_BALBcJ_G0019171.1 mouse_genomes_project 11 101289684 101292955 + Tmub2 protein_coding processed_transcript MGP_BALBcJ_T0032648.1 MGP_BALBcJ_G0019171.1 mouse_genomes_project 11 101289684 101293981 + MGP_BALBcJ_P0032648 Tmub2 protein_coding protein_coding MGP_BALBcJ_T0032649.1 MGP_BALBcJ_G0019171.1 mouse_genomes_project 11 101289696 101292135 + Tmub2 protein_coding processed_transcript MGP_BALBcJ_T0032650.1 MGP_BALBcJ_G0019171.1 mouse_genomes_project 11 101289941 101293981 + MGP_BALBcJ_P0032650 Tmub2 protein_coding protein_coding MGP_BALBcJ_T0003266.1 MGP_BALBcJ_G0003018.1 mouse_genomes_project 11 97440875 97441652 + antisense antisense MGP_BALBcJ_T0029896.1 MGP_BALBcJ_G0018466.1 mouse_genomes_project 11 67441788 67443602 + MGP_BALBcJ_P0029896 Trappc1 protein_coding protein_coding MGP_BALBcJ_T0029897.1 MGP_BALBcJ_G0018466.1 mouse_genomes_project 11 67441871 67443602 + MGP_BALBcJ_P0029897 Trappc1 protein_coding protein_coding MGP_BALBcJ_T0029898.1 MGP_BALBcJ_G0018466.1 mouse_genomes_project 11 67441883 67443602 + MGP_BALBcJ_P0029898 Trappc1 protein_coding protein_coding MGP_BALBcJ_T0029899.1 MGP_BALBcJ_G0018466.1 mouse_genomes_project 11 67441965 67443602 + MGP_BALBcJ_P0029899 Trappc1 protein_coding protein_coding MGP_BALBcJ_T0029900.1 MGP_BALBcJ_G0018466.1 mouse_genomes_project 11 67442246 67443041 + Trappc1 protein_coding processed_transcript MGP_BALBcJ_T0012738.1 MGP_BALBcJ_G0010835.1 mouse_genomes_project 11 104894613 104895622 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029372.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58158172 58286070 - MGP_BALBcJ_P0029372 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029373.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58158173 58170635 - Tom1l2 protein_coding processed_transcript MGP_BALBcJ_T0029374.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58158173 58286070 - MGP_BALBcJ_P0029374 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029375.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58158173 58286070 - MGP_BALBcJ_P0029375 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029376.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58158173 58286070 - MGP_BALBcJ_P0029376 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029377.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58161061 58162806 - Tom1l2 protein_coding processed_transcript MGP_BALBcJ_T0029378.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58161360 58176620 - MGP_BALBcJ_P0029378 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029379.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58161360 58177132 - MGP_BALBcJ_P0029379 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029380.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58172032 58286070 - MGP_BALBcJ_P0029380 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029381.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58172399 58286070 - MGP_BALBcJ_P0029381 Tom1l2 protein_coding protein_coding MGP_BALBcJ_T0029382.1 MGP_BALBcJ_G0018354.1 mouse_genomes_project 11 58184077 58286070 - Tom1l2 protein_coding processed_transcript MGP_BALBcJ_T0006339.1 MGP_BALBcJ_G0005286.1 mouse_genomes_project 11 116254295 116259519 - Gm11728 lincRNA lincRNA MGP_BALBcJ_T0006340.1 MGP_BALBcJ_G0005286.1 mouse_genomes_project 11 116257512 116259514 - Gm11728 lincRNA lincRNA MGP_BALBcJ_T0032297.1 MGP_BALBcJ_G0019099.1 mouse_genomes_project 11 99391871 99401998 - MGP_BALBcJ_P0032297 Klhl11 protein_coding protein_coding MGP_BALBcJ_T0009633.1 MGP_BALBcJ_G0007758.1 mouse_genomes_project 11 21095067 21095181 + Gm44381 miRNA miRNA MGP_BALBcJ_T0012512.1 MGP_BALBcJ_G0010609.1 mouse_genomes_project 11 24609755 24610476 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003174.1 MGP_BALBcJ_G0002945.1 mouse_genomes_project 11 60537322 60538103 + Gm12949 antisense antisense MGP_BALBcJ_T0032670.1 MGP_BALBcJ_G0019174.1 mouse_genomes_project 11 101355525 101371973 - MGP_BALBcJ_P0032670 Slc4a1 protein_coding protein_coding MGP_BALBcJ_T0032671.1 MGP_BALBcJ_G0019174.1 mouse_genomes_project 11 101365777 101367264 - Slc4a1 protein_coding processed_transcript MGP_BALBcJ_T0032672.1 MGP_BALBcJ_G0019174.1 mouse_genomes_project 11 101366857 101370397 - Slc4a1 protein_coding processed_transcript MGP_BALBcJ_T0032673.1 MGP_BALBcJ_G0019174.1 mouse_genomes_project 11 101366890 101371940 - Slc4a1 protein_coding processed_transcript MGP_BALBcJ_T0032674.1 MGP_BALBcJ_G0019174.1 mouse_genomes_project 11 101368079 101372896 - Slc4a1 protein_coding processed_transcript MGP_BALBcJ_T0028196.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20319891 20363506 + MGP_BALBcJ_P0028196 Xpo1 protein_coding protein_coding MGP_BALBcJ_T0028197.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20319891 20363506 + MGP_BALBcJ_P0028197 Xpo1 protein_coding protein_coding MGP_BALBcJ_T0028198.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20319905 20362142 + MGP_BALBcJ_P0028198 Xpo1 protein_coding protein_coding MGP_BALBcJ_T0028199.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20319908 20348756 + Xpo1 protein_coding processed_transcript MGP_BALBcJ_T0028200.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20319928 20364158 + MGP_BALBcJ_P0028200 Xpo1 protein_coding protein_coding MGP_BALBcJ_T0028201.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20320439 20331574 + MGP_BALBcJ_P0028201 Xpo1 protein_coding protein_coding MGP_BALBcJ_T0028202.1 MGP_BALBcJ_G0018026.1 mouse_genomes_project 11 20350539 20353347 + MGP_BALBcJ_P0028202 Xpo1 protein_coding protein_coding MGP_BALBcJ_T0003286.1 MGP_BALBcJ_G0003033.1 mouse_genomes_project 11 101143118 101143804 - Gm11586 antisense antisense MGP_BALBcJ_T0003280.1 MGP_BALBcJ_G0003027.1 mouse_genomes_project 11 100430863 100431678 - Gm11626 antisense antisense MGP_BALBcJ_T0028907.1 MGP_BALBcJ_G0018213.1 mouse_genomes_project 11 49282592 49289292 + MGP_BALBcJ_P0028907 protein_coding protein_coding MGP_BALBcJ_T0028908.1 MGP_BALBcJ_G0018213.1 mouse_genomes_project 11 49282594 49289291 + MGP_BALBcJ_P0028908 protein_coding protein_coding MGP_BALBcJ_T0030560.1 MGP_BALBcJ_G0018634.1 mouse_genomes_project 11 72652244 72868782 - MGP_BALBcJ_P0030560 Rap1gap2 protein_coding protein_coding MGP_BALBcJ_T0030561.1 MGP_BALBcJ_G0018634.1 mouse_genomes_project 11 72652371 72868754 - MGP_BALBcJ_P0030561 Rap1gap2 protein_coding protein_coding MGP_BALBcJ_T0030562.1 MGP_BALBcJ_G0018634.1 mouse_genomes_project 11 72652372 72685965 - Rap1gap2 protein_coding processed_transcript MGP_BALBcJ_T0030563.1 MGP_BALBcJ_G0018634.1 mouse_genomes_project 11 72654825 72802347 - MGP_BALBcJ_P0030563 Rap1gap2 protein_coding unknown_likely_coding MGP_BALBcJ_T0030564.1 MGP_BALBcJ_G0018634.1 mouse_genomes_project 11 72715167 72868720 - MGP_BALBcJ_P0030564 Rap1gap2 protein_coding protein_coding MGP_BALBcJ_T0032285.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99350534 99369212 - MGP_BALBcJ_P0032285 Nt5c3b protein_coding protein_coding MGP_BALBcJ_T0032286.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99350534 99369931 - MGP_BALBcJ_P0032286 Nt5c3b protein_coding protein_coding MGP_BALBcJ_T0032288.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99358028 99369178 - MGP_BALBcJ_P0032288 Nt5c3b protein_coding protein_coding MGP_BALBcJ_T0032289.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99358095 99359724 - Nt5c3b protein_coding processed_transcript MGP_BALBcJ_T0032290.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99361077 99369039 - Nt5c3b protein_coding processed_transcript MGP_BALBcJ_T0032291.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99361114 99369196 - Nt5c3b protein_coding processed_transcript MGP_BALBcJ_T0032292.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99361864 99369139 - Nt5c3b protein_coding processed_transcript MGP_BALBcJ_T0032293.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99366414 99369052 - Nt5c3b protein_coding processed_transcript MGP_BALBcJ_T0032294.1 MGP_BALBcJ_G0019097.1 mouse_genomes_project 11 99367675 99369050 - Nt5c3b protein_coding processed_transcript MGP_BALBcJ_T0012762.1 MGP_BALBcJ_G0010859.1 mouse_genomes_project 11 116354373 116354821 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012491.1 MGP_BALBcJ_G0010588.1 mouse_genomes_project 11 18270764 18271366 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028112.1 MGP_BALBcJ_G0018005.1 mouse_genomes_project 11 17237711 17256996 + Rab1a protein_coding processed_transcript MGP_BALBcJ_T0028113.1 MGP_BALBcJ_G0018005.1 mouse_genomes_project 11 17237881 17261364 + Rab1a protein_coding processed_transcript MGP_BALBcJ_T0028114.1 MGP_BALBcJ_G0018005.1 mouse_genomes_project 11 17237902 17264592 + MGP_BALBcJ_P0028114 Rab1a protein_coding protein_coding MGP_BALBcJ_T0006248.1 MGP_BALBcJ_G0005221.1 mouse_genomes_project 11 70107476 70119114 - 4930401O10Rik lincRNA lincRNA MGP_BALBcJ_T0009712.1 MGP_BALBcJ_G0007837.1 mouse_genomes_project 11 95641182 95641255 + Mir152 miRNA miRNA MGP_BALBcJ_T0030782.1 MGP_BALBcJ_G0018682.1 mouse_genomes_project 11 75319692 75354049 + MGP_BALBcJ_P0030782 Slc6a4 protein_coding protein_coding MGP_BALBcJ_T0030783.1 MGP_BALBcJ_G0018682.1 mouse_genomes_project 11 75319705 75354050 + MGP_BALBcJ_P0030783 Slc6a4 protein_coding protein_coding MGP_BALBcJ_T0030784.1 MGP_BALBcJ_G0018682.1 mouse_genomes_project 11 75331176 75334948 + MGP_BALBcJ_P0030784 Slc6a4 protein_coding protein_coding MGP_BALBcJ_T0030785.1 MGP_BALBcJ_G0018682.1 mouse_genomes_project 11 75340070 75344134 + Slc6a4 protein_coding retained_intron MGP_BALBcJ_T0030489.1 MGP_BALBcJ_G0018597.1 mouse_genomes_project 11 71409835 71434653 + MGP_BALBcJ_P0030489 Shpk protein_coding protein_coding MGP_BALBcJ_T0030490.1 MGP_BALBcJ_G0018597.1 mouse_genomes_project 11 71409835 71434644 + MGP_BALBcJ_P0030490 Shpk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033217.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112403437 112735837 - MGP_BALBcJ_P0033217 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033218.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112403437 112735846 - MGP_BALBcJ_P0033218 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033219.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112403437 112735834 - MGP_BALBcJ_P0033219 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033220.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112532168 112824331 - MGP_BALBcJ_P0033220 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033221.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112631210 112735857 - MGP_BALBcJ_P0033221 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033222.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112693220 112824339 - MGP_BALBcJ_P0033222 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033223.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112729612 112824330 - MGP_BALBcJ_P0033223 Slc39a11 protein_coding protein_coding MGP_BALBcJ_T0033224.1 MGP_BALBcJ_G0019291.1 mouse_genomes_project 11 112747950 112824330 - Slc39a11 protein_coding processed_transcript MGP_BALBcJ_T0011781.1 MGP_BALBcJ_G0009902.1 mouse_genomes_project 11 72153494 72154431 + MGP_BALBcJ_P0011781 Olfr22-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0028115.1 MGP_BALBcJ_G0018006.1 mouse_genomes_project 11 17264596 17287130 - MGP_BALBcJ_P0028115 Cep68 protein_coding protein_coding MGP_BALBcJ_T0028116.1 MGP_BALBcJ_G0018006.1 mouse_genomes_project 11 17276163 17287217 - MGP_BALBcJ_P0028116 Cep68 protein_coding protein_coding MGP_BALBcJ_T0028117.1 MGP_BALBcJ_G0018006.1 mouse_genomes_project 11 17279309 17287182 - Cep68 protein_coding retained_intron MGP_BALBcJ_T0032586.1 MGP_BALBcJ_G0019160.1 mouse_genomes_project 11 101037666 101051814 + MGP_BALBcJ_P0032586 Cd300lg protein_coding protein_coding MGP_BALBcJ_T0032587.1 MGP_BALBcJ_G0019160.1 mouse_genomes_project 11 101037666 101051814 + MGP_BALBcJ_P0032587 Cd300lg protein_coding protein_coding MGP_BALBcJ_T0032588.1 MGP_BALBcJ_G0019160.1 mouse_genomes_project 11 101037666 101046712 + MGP_BALBcJ_P0032588 Cd300lg protein_coding protein_coding MGP_BALBcJ_T0032589.1 MGP_BALBcJ_G0019160.1 mouse_genomes_project 11 101037666 101051814 + MGP_BALBcJ_P0032589 Cd300lg protein_coding protein_coding MGP_BALBcJ_T0006217.1 MGP_BALBcJ_G0005196.1 mouse_genomes_project 11 56772618 56773761 + Gm12259 lincRNA lincRNA MGP_BALBcJ_T0033024.1 MGP_BALBcJ_G0019251.1 mouse_genomes_project 11 105537931 105651061 - MGP_BALBcJ_P0033024 Tex2 protein_coding protein_coding MGP_BALBcJ_T0033025.1 MGP_BALBcJ_G0019251.1 mouse_genomes_project 11 105579860 105614892 - MGP_BALBcJ_P0033025 Tex2 protein_coding protein_coding MGP_BALBcJ_T0033026.1 MGP_BALBcJ_G0019251.1 mouse_genomes_project 11 105604006 105651554 - MGP_BALBcJ_P0033026 Tex2 protein_coding protein_coding MGP_BALBcJ_T0033027.1 MGP_BALBcJ_G0019251.1 mouse_genomes_project 11 105604391 105616379 - MGP_BALBcJ_P0033027 Tex2 protein_coding protein_coding MGP_BALBcJ_T0031064.1 MGP_BALBcJ_G0018745.1 mouse_genomes_project 11 78499039 78546660 + MGP_BALBcJ_P0031064 Atad5 protein_coding protein_coding MGP_BALBcJ_T0031065.1 MGP_BALBcJ_G0018745.1 mouse_genomes_project 11 78499039 78546663 + MGP_BALBcJ_P0031065 Atad5 protein_coding protein_coding MGP_BALBcJ_T0031066.1 MGP_BALBcJ_G0018745.1 mouse_genomes_project 11 78511579 78546663 + Atad5 protein_coding processed_transcript MGP_BALBcJ_T0031067.1 MGP_BALBcJ_G0018745.1 mouse_genomes_project 11 78512699 78518217 + Atad5 protein_coding retained_intron MGP_BALBcJ_T0028145.1 MGP_BALBcJ_G0018013.1 mouse_genomes_project 11 18364656 18372617 - Ugp2 protein_coding processed_transcript MGP_BALBcJ_T0028146.1 MGP_BALBcJ_G0018013.1 mouse_genomes_project 11 18364672 18366235 - Ugp2 protein_coding processed_transcript MGP_BALBcJ_T0028147.1 MGP_BALBcJ_G0018013.1 mouse_genomes_project 11 18364754 18413750 - MGP_BALBcJ_P0028147 Ugp2 protein_coding protein_coding MGP_BALBcJ_T0027799.1 MGP_BALBcJ_G0017933.1 mouse_genomes_project 11 1867013 1876162 - MGP_BALBcJ_P0027799 Nefh protein_coding protein_coding MGP_BALBcJ_T0100544.1 MGP_BALBcJ_G0038580.1 mouse_genomes_project 11 101850734 101850871 + Gm22683 snoRNA snoRNA MGP_BALBcJ_T0012509.1 MGP_BALBcJ_G0010606.1 mouse_genomes_project 11 23915395 23915919 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028462.1 MGP_BALBcJ_G0018087.1 mouse_genomes_project 11 30820357 30847711 - MGP_BALBcJ_P0028462 Gabrp protein_coding protein_coding MGP_BALBcJ_T0028463.1 MGP_BALBcJ_G0018087.1 mouse_genomes_project 11 30841111 30847713 - MGP_BALBcJ_P0028463 Gabrp protein_coding protein_coding MGP_BALBcJ_T0098737.1 MGP_BALBcJ_G0036791.1 mouse_genomes_project 11 8919278 8919406 - Gm25058 scaRNA scaRNA MGP_BALBcJ_T0012431.1 MGP_BALBcJ_G0010528.1 mouse_genomes_project 11 589645 590542 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034186.1 MGP_BALBcJ_G0019482.1 mouse_genomes_project 11 120450059 120451762 + MGP_BALBcJ_P0034186 Uts2r protein_coding protein_coding MGP_BALBcJ_T0012767.1 MGP_BALBcJ_G0010864.1 mouse_genomes_project 11 120380477 120380645 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000836.1 MGP_BALBcJ_G0000768.1 mouse_genomes_project 11 15884088 15885645 - TEC TEC MGP_BALBcJ_T0012554.1 MGP_BALBcJ_G0010651.1 mouse_genomes_project 11 41749780 41749940 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003270.1 MGP_BALBcJ_G0003020.1 mouse_genomes_project 11 98261102 98261660 + Gm11940 antisense antisense MGP_BALBcJ_T0032258.1 MGP_BALBcJ_G0019090.1 mouse_genomes_project 11 99186139 99189230 - Krt42 protein_coding retained_intron MGP_BALBcJ_T0032259.1 MGP_BALBcJ_G0019090.1 mouse_genomes_project 11 99186144 99193123 - MGP_BALBcJ_P0032259 Krt42 protein_coding protein_coding MGP_BALBcJ_T0009749.1 MGP_BALBcJ_G0007874.1 mouse_genomes_project 11 119272732 119272819 + Mir3065 miRNA miRNA MGP_BALBcJ_T0012625.1 MGP_BALBcJ_G0010722.1 mouse_genomes_project 11 66152595 66152980 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030559.1 MGP_BALBcJ_G0018633.1 mouse_genomes_project 11 72631220 72634010 + MGP_BALBcJ_P0030559 Olfr412 protein_coding protein_coding MGP_BALBcJ_T0003213.1 MGP_BALBcJ_G0002977.1 mouse_genomes_project 11 76767622 76778795 + Slc13a2os antisense antisense MGP_BALBcJ_T0034205.1 MGP_BALBcJ_G0019487.1 mouse_genomes_project 11 120548574 120597712 + MGP_BALBcJ_P0034205 Foxk2 protein_coding protein_coding MGP_BALBcJ_T0034206.1 MGP_BALBcJ_G0019487.1 mouse_genomes_project 11 120579310 120585656 + Foxk2 protein_coding processed_transcript MGP_BALBcJ_T0034207.1 MGP_BALBcJ_G0019487.1 mouse_genomes_project 11 120587081 120588439 + Foxk2 protein_coding retained_intron MGP_BALBcJ_T0032219.1 MGP_BALBcJ_G0019059.1 mouse_genomes_project 11 98720419 98721585 - MGP_BALBcJ_P0032219 protein_coding protein_coding MGP_BALBcJ_T0028226.1 MGP_BALBcJ_G0018031.1 mouse_genomes_project 11 20716979 20736440 - MGP_BALBcJ_P0028226 Pex13 protein_coding protein_coding MGP_BALBcJ_T0028227.1 MGP_BALBcJ_G0018031.1 mouse_genomes_project 11 20719956 20736333 - MGP_BALBcJ_P0028227 Pex13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028228.1 MGP_BALBcJ_G0018031.1 mouse_genomes_project 11 20726334 20736323 - Pex13 protein_coding processed_transcript MGP_BALBcJ_T0028229.1 MGP_BALBcJ_G0018031.1 mouse_genomes_project 11 20726587 20736154 - Pex13 protein_coding processed_transcript MGP_BALBcJ_T0009629.1 MGP_BALBcJ_G0007754.1 mouse_genomes_project 11 13652710 13652811 - Gm24714 miRNA miRNA MGP_BALBcJ_T0011269.1 MGP_BALBcJ_G0009394.1 mouse_genomes_project 11 536365 536542 - Gm27624 misc_RNA misc_RNA MGP_BALBcJ_T0011291.1 MGP_BALBcJ_G0009416.1 mouse_genomes_project 11 99713312 99713600 - Gm24358 misc_RNA misc_RNA MGP_BALBcJ_T0012718.1 MGP_BALBcJ_G0010815.1 mouse_genomes_project 11 99165304 99165640 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027976.1 MGP_BALBcJ_G0017970.1 mouse_genomes_project 11 3623187 3625172 - Wap protein_coding processed_transcript MGP_BALBcJ_T0027977.1 MGP_BALBcJ_G0017970.1 mouse_genomes_project 11 3623187 3626575 - MGP_BALBcJ_P0027977 Wap protein_coding protein_coding MGP_BALBcJ_T0027978.1 MGP_BALBcJ_G0017970.1 mouse_genomes_project 11 3623244 3625161 - Wap protein_coding processed_transcript MGP_BALBcJ_T0030498.1 MGP_BALBcJ_G0018600.1 mouse_genomes_project 11 71517335 71536714 - MGP_BALBcJ_P0030498 Aspa protein_coding protein_coding MGP_BALBcJ_T0030499.1 MGP_BALBcJ_G0018600.1 mouse_genomes_project 11 71517335 71541636 - MGP_BALBcJ_P0030499 Aspa protein_coding protein_coding MGP_BALBcJ_T0030500.1 MGP_BALBcJ_G0018600.1 mouse_genomes_project 11 71525910 71538539 - MGP_BALBcJ_P0030500 Aspa protein_coding protein_coding MGP_BALBcJ_T0030501.1 MGP_BALBcJ_G0018600.1 mouse_genomes_project 11 71528094 71536417 - Aspa protein_coding retained_intron MGP_BALBcJ_T0030502.1 MGP_BALBcJ_G0018600.1 mouse_genomes_project 11 71531926 71538869 - MGP_BALBcJ_P0030502 Aspa protein_coding protein_coding MGP_BALBcJ_T0030503.1 MGP_BALBcJ_G0018600.1 mouse_genomes_project 11 71534311 71536694 - MGP_BALBcJ_P0030503 Aspa protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029132.1 MGP_BALBcJ_G0018269.1 mouse_genomes_project 11 53059690 53123038 - MGP_BALBcJ_P0029132 Fat2 protein_coding unknown_likely_coding MGP_BALBcJ_T0100482.1 MGP_BALBcJ_G0038518.1 mouse_genomes_project 11 3517551 3517684 - Snora9 snoRNA snoRNA MGP_BALBcJ_T0100548.1 MGP_BALBcJ_G0038584.1 mouse_genomes_project 11 114967024 114967159 + Gm23699 snoRNA snoRNA MGP_BALBcJ_T0032256.1 MGP_BALBcJ_G0019088.1 mouse_genomes_project 11 99168106 99172152 - MGP_BALBcJ_P0032256 Krt16 protein_coding protein_coding MGP_BALBcJ_T0029507.1 MGP_BALBcJ_G0018381.1 mouse_genomes_project 11 59505170 59512958 + MGP_BALBcJ_P0029507 B9d1 protein_coding protein_coding MGP_BALBcJ_T0029508.1 MGP_BALBcJ_G0018381.1 mouse_genomes_project 11 59505229 59512958 + B9d1 protein_coding processed_transcript MGP_BALBcJ_T0029509.1 MGP_BALBcJ_G0018381.1 mouse_genomes_project 11 59505278 59508455 + B9d1 protein_coding processed_transcript MGP_BALBcJ_T0029510.1 MGP_BALBcJ_G0018381.1 mouse_genomes_project 11 59505281 59512958 + B9d1 protein_coding processed_transcript MGP_BALBcJ_T0029511.1 MGP_BALBcJ_G0018381.1 mouse_genomes_project 11 59509142 59512958 + MGP_BALBcJ_P0029511 B9d1 protein_coding protein_coding MGP_BALBcJ_T0029512.1 MGP_BALBcJ_G0018381.1 mouse_genomes_project 11 59512341 59512958 + B9d1 protein_coding processed_transcript MGP_BALBcJ_T0006239.1 MGP_BALBcJ_G0005214.1 mouse_genomes_project 11 68913134 68919594 - Gm12320 lincRNA lincRNA MGP_BALBcJ_T0030466.1 MGP_BALBcJ_G0018589.1 mouse_genomes_project 11 71222136 71245482 + Camkk1 protein_coding retained_intron MGP_BALBcJ_T0030467.1 MGP_BALBcJ_G0018589.1 mouse_genomes_project 11 71222171 71245493 + MGP_BALBcJ_P0030467 Camkk1 protein_coding protein_coding MGP_BALBcJ_T0030468.1 MGP_BALBcJ_G0018589.1 mouse_genomes_project 11 71229713 71243712 + MGP_BALBcJ_P0030468 Camkk1 protein_coding protein_coding MGP_BALBcJ_T0012763.1 MGP_BALBcJ_G0010860.1 mouse_genomes_project 11 117164017 117164441 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030210.1 MGP_BALBcJ_G0018537.1 mouse_genomes_project 11 68619140 68620063 + MGP_BALBcJ_P0030210 Zmynd15 protein_coding protein_coding MGP_BALBcJ_T0030211.1 MGP_BALBcJ_G0018537.1 mouse_genomes_project 11 68619337 68620097 + MGP_BALBcJ_P0030211 Zmynd15 protein_coding protein_coding MGP_BALBcJ_T0030212.1 MGP_BALBcJ_G0018537.1 mouse_genomes_project 11 68619396 68625400 + Zmynd15 protein_coding retained_intron MGP_BALBcJ_T0030213.1 MGP_BALBcJ_G0018537.1 mouse_genomes_project 11 68619765 68625291 + MGP_BALBcJ_P0030213 Zmynd15 protein_coding protein_coding MGP_BALBcJ_T0030214.1 MGP_BALBcJ_G0018537.1 mouse_genomes_project 11 68619770 68625287 + MGP_BALBcJ_P0030214 Zmynd15 protein_coding protein_coding MGP_BALBcJ_T0017107.1 MGP_BALBcJ_G0015086.1 mouse_genomes_project 11 424782 425452 + Gm11947 processed_transcript processed_transcript MGP_BALBcJ_T0098738.1 MGP_BALBcJ_G0036792.1 mouse_genomes_project 11 16695986 16696130 - Gm23386 scaRNA scaRNA MGP_BALBcJ_T0029565.1 MGP_BALBcJ_G0018391.1 mouse_genomes_project 11 60277532 60291663 - MGP_BALBcJ_P0029565 Zswim7 protein_coding protein_coding MGP_BALBcJ_T0032217.1 MGP_BALBcJ_G0019057.1 mouse_genomes_project 11 98685481 98686344 - MGP_BALBcJ_P0032217 Krtap4-8 protein_coding protein_coding MGP_BALBcJ_T0034144.1 MGP_BALBcJ_G0019473.1 mouse_genomes_project 11 120077568 120096270 - MGP_BALBcJ_P0034144 Fasn protein_coding protein_coding MGP_BALBcJ_T0034145.1 MGP_BALBcJ_G0019473.1 mouse_genomes_project 11 120078827 120095818 - MGP_BALBcJ_P0034145 Fasn protein_coding protein_coding MGP_BALBcJ_T0034146.1 MGP_BALBcJ_G0019473.1 mouse_genomes_project 11 120079269 120080328 - Fasn protein_coding retained_intron MGP_BALBcJ_T0034147.1 MGP_BALBcJ_G0019473.1 mouse_genomes_project 11 120080286 120081424 - Fasn protein_coding retained_intron MGP_BALBcJ_T0034148.1 MGP_BALBcJ_G0019473.1 mouse_genomes_project 11 120086217 120087178 - Fasn protein_coding retained_intron MGP_BALBcJ_T0034149.1 MGP_BALBcJ_G0019473.1 mouse_genomes_project 11 120094494 120095503 - MGP_BALBcJ_P0034149 Fasn protein_coding protein_coding MGP_BALBcJ_T0012618.1 MGP_BALBcJ_G0010715.1 mouse_genomes_project 11 60766730 60767947 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003239.1 MGP_BALBcJ_G0002997.1 mouse_genomes_project 11 87496944 87527580 + 4930556N13Rik antisense antisense MGP_BALBcJ_T0030727.1 MGP_BALBcJ_G0018669.1 mouse_genomes_project 11 74501348 74541631 + Fam57a protein_coding processed_transcript MGP_BALBcJ_T0030728.1 MGP_BALBcJ_G0018669.1 mouse_genomes_project 11 74524270 74525232 + Fam57a protein_coding retained_intron MGP_BALBcJ_T0030729.1 MGP_BALBcJ_G0018669.1 mouse_genomes_project 11 74524307 74531398 + MGP_BALBcJ_P0030729 Fam57a protein_coding protein_coding MGP_BALBcJ_T0030730.1 MGP_BALBcJ_G0018669.1 mouse_genomes_project 11 74524340 74531546 + MGP_BALBcJ_P0030730 Fam57a protein_coding protein_coding MGP_BALBcJ_T0029314.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57585168 57651692 + protein_coding processed_transcript MGP_BALBcJ_T0029315.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57586358 57705378 + MGP_BALBcJ_P0029315 protein_coding protein_coding MGP_BALBcJ_T0029316.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57586370 57705372 + MGP_BALBcJ_P0029316 protein_coding protein_coding MGP_BALBcJ_T0029317.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57586370 57700741 + MGP_BALBcJ_P0029317 protein_coding protein_coding MGP_BALBcJ_T0029318.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57586370 57700741 + MGP_BALBcJ_P0029318 protein_coding protein_coding MGP_BALBcJ_T0029319.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57651687 57701120 + MGP_BALBcJ_P0029319 protein_coding protein_coding MGP_BALBcJ_T0029320.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57655556 57700741 + MGP_BALBcJ_P0029320 protein_coding protein_coding MGP_BALBcJ_T0029321.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57664855 57673897 + protein_coding processed_transcript MGP_BALBcJ_T0029322.1 MGP_BALBcJ_G0018344.1 mouse_genomes_project 11 57685079 57700741 + MGP_BALBcJ_P0029322 protein_coding protein_coding MGP_BALBcJ_T0028991.1 MGP_BALBcJ_G0018236.1 mouse_genomes_project 11 51235255 51238957 - MGP_BALBcJ_P0028991 Sowaha protein_coding protein_coding MGP_BALBcJ_T0029475.1 MGP_BALBcJ_G0018376.1 mouse_genomes_project 11 59297673 59338993 - MGP_BALBcJ_P0029475 Slc47a2 protein_coding protein_coding MGP_BALBcJ_T0029476.1 MGP_BALBcJ_G0018376.1 mouse_genomes_project 11 59299964 59338983 - MGP_BALBcJ_P0029476 Slc47a2 protein_coding protein_coding MGP_BALBcJ_T0029477.1 MGP_BALBcJ_G0018376.1 mouse_genomes_project 11 59333114 59338717 - Slc47a2 protein_coding processed_transcript MGP_BALBcJ_T0012451.1 MGP_BALBcJ_G0010548.1 mouse_genomes_project 11 3837887 3838646 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033177.1 MGP_BALBcJ_G0019280.1 mouse_genomes_project 11 108774647 108827033 - MGP_BALBcJ_P0033177 Fam20a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033178.1 MGP_BALBcJ_G0019280.1 mouse_genomes_project 11 108777824 108827010 - MGP_BALBcJ_P0033178 Fam20a protein_coding protein_coding MGP_BALBcJ_T0033179.1 MGP_BALBcJ_G0019280.1 mouse_genomes_project 11 108778372 108781319 - Fam20a protein_coding retained_intron MGP_BALBcJ_T0033180.1 MGP_BALBcJ_G0019280.1 mouse_genomes_project 11 108779535 108787898 - Fam20a protein_coding retained_intron MGP_BALBcJ_T0006288.1 MGP_BALBcJ_G0005248.1 mouse_genomes_project 11 87956157 87963741 + Gm2018 lincRNA lincRNA MGP_BALBcJ_T0032078.1 MGP_BALBcJ_G0019003.1 mouse_genomes_project 11 97305413 97388059 - MGP_BALBcJ_P0032078 Ikzf3 protein_coding protein_coding MGP_BALBcJ_T0032079.1 MGP_BALBcJ_G0019003.1 mouse_genomes_project 11 97307769 97317841 - Ikzf3 protein_coding processed_transcript MGP_BALBcJ_T0032080.1 MGP_BALBcJ_G0019003.1 mouse_genomes_project 11 97324645 97329905 - Ikzf3 protein_coding processed_transcript MGP_BALBcJ_T0032081.1 MGP_BALBcJ_G0019003.1 mouse_genomes_project 11 97353929 97388290 - Ikzf3 protein_coding retained_intron MGP_BALBcJ_T0032185.1 MGP_BALBcJ_G0019028.1 mouse_genomes_project 11 98141696 98149380 - MGP_BALBcJ_P0032185 Krt24 protein_coding protein_coding MGP_BALBcJ_T0032675.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101403297 101411643 + MGP_BALBcJ_P0032675 Rundc3a protein_coding protein_coding MGP_BALBcJ_T0032676.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101403297 101411643 + MGP_BALBcJ_P0032676 Rundc3a protein_coding protein_coding MGP_BALBcJ_T0032677.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101403297 101411643 + MGP_BALBcJ_P0032677 Rundc3a protein_coding protein_coding MGP_BALBcJ_T0032678.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101403297 101412444 + MGP_BALBcJ_P0032678 Rundc3a protein_coding protein_coding MGP_BALBcJ_T0032679.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101407751 101412444 + Rundc3a protein_coding retained_intron MGP_BALBcJ_T0032680.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101408006 101409668 + Rundc3a protein_coding processed_transcript MGP_BALBcJ_T0032681.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101409055 101412118 + Rundc3a protein_coding processed_transcript MGP_BALBcJ_T0032682.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101409452 101412115 + Rundc3a protein_coding processed_transcript MGP_BALBcJ_T0032683.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101409644 101412041 + Rundc3a protein_coding processed_transcript MGP_BALBcJ_T0032684.1 MGP_BALBcJ_G0019175.1 mouse_genomes_project 11 101409746 101410674 + Rundc3a protein_coding processed_transcript MGP_BALBcJ_T0099264.1 MGP_BALBcJ_G0037300.1 mouse_genomes_project 11 73010105 73010212 + Gm24211 snRNA snRNA MGP_BALBcJ_T0029671.1 MGP_BALBcJ_G0018415.1 mouse_genomes_project 11 63172869 63181094 - MGP_BALBcJ_P0029671 1700086D15Rik protein_coding protein_coding MGP_BALBcJ_T0029672.1 MGP_BALBcJ_G0018415.1 mouse_genomes_project 11 63172869 63181093 - MGP_BALBcJ_P0029672 1700086D15Rik protein_coding protein_coding MGP_BALBcJ_T0012694.1 MGP_BALBcJ_G0010791.1 mouse_genomes_project 11 90489842 90490791 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012673.1 MGP_BALBcJ_G0010770.1 mouse_genomes_project 11 81192269 81192671 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030733.1 MGP_BALBcJ_G0018671.1 mouse_genomes_project 11 74544399 74545460 + MGP_BALBcJ_P0030733 Dbil5 protein_coding protein_coding MGP_BALBcJ_T0029814.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080190 67083868 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029815.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080190 67080719 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029816.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080190 67082472 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029817.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080190 67082526 - MGP_BALBcJ_P0029817 Rangrf protein_coding protein_coding MGP_BALBcJ_T0029818.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080193 67081050 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029819.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080194 67081152 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029820.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080201 67081075 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029821.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080204 67080903 - Rangrf protein_coding processed_transcript MGP_BALBcJ_T0029822.1 MGP_BALBcJ_G0018451.1 mouse_genomes_project 11 67080327 67082401 - MGP_BALBcJ_P0029822 Rangrf protein_coding unknown_likely_coding MGP_BALBcJ_T0012493.1 MGP_BALBcJ_G0010590.1 mouse_genomes_project 11 18336964 18337265 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003275.1 MGP_BALBcJ_G0003022.1 mouse_genomes_project 11 98975188 99008642 + Gm11571 antisense antisense MGP_BALBcJ_T0033034.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798179 105815916 + MGP_BALBcJ_P0033034 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033035.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798193 105814324 + MGP_BALBcJ_P0033035 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033036.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798193 105813901 + MGP_BALBcJ_P0033036 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033037.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798193 105813901 + MGP_BALBcJ_P0033037 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033038.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798218 105815841 + MGP_BALBcJ_P0033038 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033039.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798221 105815839 + MGP_BALBcJ_P0033039 Milr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033040.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105798221 105814887 + MGP_BALBcJ_P0033040 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033041.1 MGP_BALBcJ_G0019253.1 mouse_genomes_project 11 105801896 105815842 + MGP_BALBcJ_P0033041 Milr1 protein_coding protein_coding MGP_BALBcJ_T0033341.1 MGP_BALBcJ_G0019322.1 mouse_genomes_project 11 114526327 114551735 + MGP_BALBcJ_P0033341 Otop2 protein_coding protein_coding MGP_BALBcJ_T0033343.1 MGP_BALBcJ_G0019322.1 mouse_genomes_project 11 114541985 114542966 + Otop2 protein_coding processed_transcript MGP_BALBcJ_T0033344.1 MGP_BALBcJ_G0019322.1 mouse_genomes_project 11 114542216 114542959 + Otop2 protein_coding processed_transcript MGP_BALBcJ_T0033345.1 MGP_BALBcJ_G0019322.1 mouse_genomes_project 11 114542380 114551735 + MGP_BALBcJ_P0033345 Otop2 protein_coding protein_coding MGP_BALBcJ_T0012765.1 MGP_BALBcJ_G0010862.1 mouse_genomes_project 11 118908072 118908517 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029220.1 MGP_BALBcJ_G0018302.1 mouse_genomes_project 11 56389743 56393947 - MGP_BALBcJ_P0029220 Olfr328 protein_coding protein_coding MGP_BALBcJ_T0033603.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115588974 115662171 - MGP_BALBcJ_P0033603 Rnf157 protein_coding protein_coding MGP_BALBcJ_T0033604.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115588974 115612014 - MGP_BALBcJ_P0033604 Rnf157 protein_coding protein_coding MGP_BALBcJ_T0033605.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115588974 115662171 - MGP_BALBcJ_P0033605 Rnf157 protein_coding protein_coding MGP_BALBcJ_T0033606.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115590959 115600117 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0033607.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115591026 115600591 - MGP_BALBcJ_P0033607 Rnf157 protein_coding protein_coding MGP_BALBcJ_T0033608.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115605588 115612436 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0033609.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115606903 115608405 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0033610.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115610291 115612240 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0033611.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115612184 115612944 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0033612.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115612820 115641815 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0033613.1 MGP_BALBcJ_G0019368.1 mouse_genomes_project 11 115652071 115662199 - Rnf157 protein_coding processed_transcript MGP_BALBcJ_T0028739.1 MGP_BALBcJ_G0018165.1 mouse_genomes_project 11 46967243 46968316 + MGP_BALBcJ_P0028739 Olfr1389 protein_coding protein_coding MGP_BALBcJ_T0009726.1 MGP_BALBcJ_G0007851.1 mouse_genomes_project 11 100391313 100391380 - Mir6929 miRNA miRNA MGP_BALBcJ_T0012710.1 MGP_BALBcJ_G0010807.1 mouse_genomes_project 11 96897724 96897880 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012495.1 MGP_BALBcJ_G0010592.1 mouse_genomes_project 11 18546780 18547354 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031119.1 MGP_BALBcJ_G0018757.1 mouse_genomes_project 11 79291736 79301259 + MGP_BALBcJ_P0031119 Spaca3 protein_coding protein_coding MGP_BALBcJ_T0031120.1 MGP_BALBcJ_G0018757.1 mouse_genomes_project 11 79291743 79301263 + MGP_BALBcJ_P0031120 Spaca3 protein_coding protein_coding MGP_BALBcJ_T0006357.1 MGP_BALBcJ_G0005301.1 mouse_genomes_project 11 121090112 121097330 + Gm12589 lincRNA lincRNA MGP_BALBcJ_T0029679.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63708496 63808225 - MGP_BALBcJ_P0029679 Map2k4 protein_coding protein_coding MGP_BALBcJ_T0029680.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63710586 63740299 - MGP_BALBcJ_P0029680 Map2k4 protein_coding protein_coding MGP_BALBcJ_T0029681.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63711981 63717266 - Map2k4 protein_coding processed_transcript MGP_BALBcJ_T0029682.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63716539 63808213 - MGP_BALBcJ_P0029682 Map2k4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029683.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63732925 63808214 - MGP_BALBcJ_P0029683 Map2k4 protein_coding protein_coding MGP_BALBcJ_T0029684.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63732926 63808213 - MGP_BALBcJ_P0029684 Map2k4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029685.1 MGP_BALBcJ_G0018417.1 mouse_genomes_project 11 63740234 63765663 - Map2k4 protein_coding processed_transcript MGP_BALBcJ_T0027776.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1691195 1776029 - MGP_BALBcJ_P0027776 Nf2 protein_coding protein_coding MGP_BALBcJ_T0027777.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1691195 1775457 - MGP_BALBcJ_P0027777 Nf2 protein_coding protein_coding MGP_BALBcJ_T0027778.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1693271 1710757 - Nf2 protein_coding retained_intron MGP_BALBcJ_T0027779.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1707586 1758850 - Nf2 protein_coding processed_transcript MGP_BALBcJ_T0027780.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1710085 1742224 - MGP_BALBcJ_P0027780 Nf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027781.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1716936 1775666 - MGP_BALBcJ_P0027781 Nf2 protein_coding protein_coding MGP_BALBcJ_T0027782.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1720166 1741301 - Nf2 protein_coding processed_transcript MGP_BALBcJ_T0027783.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1720215 1744606 - MGP_BALBcJ_P0027783 Nf2 protein_coding protein_coding MGP_BALBcJ_T0027784.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1725610 1746456 - MGP_BALBcJ_P0027784 Nf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027785.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1744563 1750784 - Nf2 protein_coding processed_transcript MGP_BALBcJ_T0027786.1 MGP_BALBcJ_G0017930.1 mouse_genomes_project 11 1755697 1775597 - MGP_BALBcJ_P0027786 Nf2 protein_coding protein_coding MGP_BALBcJ_T0009660.1 MGP_BALBcJ_G0007785.1 mouse_genomes_project 11 57256244 57256340 - Gm24756 miRNA miRNA MGP_BALBcJ_T0009645.1 MGP_BALBcJ_G0007770.1 mouse_genomes_project 11 41833970 41834020 + Gm22121 miRNA miRNA MGP_BALBcJ_T0099290.1 MGP_BALBcJ_G0037326.1 mouse_genomes_project 11 97800140 97800247 + Gm22061 snRNA snRNA MGP_BALBcJ_T0029634.1 MGP_BALBcJ_G0018403.1 mouse_genomes_project 11 60844208 60875555 + MGP_BALBcJ_P0029634 Trim16 protein_coding protein_coding MGP_BALBcJ_T0029635.1 MGP_BALBcJ_G0018403.1 mouse_genomes_project 11 60844395 60845201 + Trim16 protein_coding processed_transcript MGP_BALBcJ_T0029636.1 MGP_BALBcJ_G0018403.1 mouse_genomes_project 11 60844460 60865235 + MGP_BALBcJ_P0029636 Trim16 protein_coding protein_coding MGP_BALBcJ_T0029637.1 MGP_BALBcJ_G0018403.1 mouse_genomes_project 11 60858047 60865717 + Trim16 protein_coding processed_transcript MGP_BALBcJ_T0028612.1 MGP_BALBcJ_G0018126.1 mouse_genomes_project 11 43260517 43277182 - MGP_BALBcJ_P0028612 Lsm11 protein_coding protein_coding MGP_BALBcJ_T0028613.1 MGP_BALBcJ_G0018126.1 mouse_genomes_project 11 43263328 43277182 - MGP_BALBcJ_P0028613 Lsm11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012438.1 MGP_BALBcJ_G0010535.1 mouse_genomes_project 11 2631924 2632201 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031398.1 MGP_BALBcJ_G0018833.1 mouse_genomes_project 11 85245466 85253944 + MGP_BALBcJ_P0031398 Ptrh2 protein_coding protein_coding MGP_BALBcJ_T0031399.1 MGP_BALBcJ_G0018833.1 mouse_genomes_project 11 85245466 85253944 + MGP_BALBcJ_P0031399 Ptrh2 protein_coding protein_coding MGP_BALBcJ_T0028361.1 MGP_BALBcJ_G0018060.1 mouse_genomes_project 11 28124315 28328623 + MGP_BALBcJ_P0028361 Asb3 protein_coding protein_coding MGP_BALBcJ_T0028367.1 MGP_BALBcJ_G0018060.1 mouse_genomes_project 11 28194260 28329993 + MGP_BALBcJ_P0028367 Asb3 protein_coding protein_coding MGP_BALBcJ_T0028368.1 MGP_BALBcJ_G0018060.1 mouse_genomes_project 11 28194271 28329993 + MGP_BALBcJ_P0028368 Asb3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028369.1 MGP_BALBcJ_G0018060.1 mouse_genomes_project 11 28194284 28313590 + MGP_BALBcJ_P0028369 Asb3 protein_coding protein_coding MGP_BALBcJ_T0028370.1 MGP_BALBcJ_G0018060.1 mouse_genomes_project 11 28194313 28263782 + Asb3 protein_coding retained_intron MGP_BALBcJ_T0028373.1 MGP_BALBcJ_G0018060.1 mouse_genomes_project 11 28284570 28287563 + Asb3 protein_coding retained_intron MGP_BALBcJ_T0031947.1 MGP_BALBcJ_G0018972.1 mouse_genomes_project 11 96214306 96307649 + MGP_BALBcJ_P0031947 Arhgap23 protein_coding protein_coding MGP_BALBcJ_T0031948.1 MGP_BALBcJ_G0018972.1 mouse_genomes_project 11 96214378 96296924 + MGP_BALBcJ_P0031948 Arhgap23 protein_coding unknown_likely_coding MGP_BALBcJ_T0031949.1 MGP_BALBcJ_G0018972.1 mouse_genomes_project 11 96240775 96248716 + Arhgap23 protein_coding processed_transcript MGP_BALBcJ_T0031950.1 MGP_BALBcJ_G0018972.1 mouse_genomes_project 11 96254663 96307647 + MGP_BALBcJ_P0031950 Arhgap23 protein_coding protein_coding MGP_BALBcJ_T0031951.1 MGP_BALBcJ_G0018972.1 mouse_genomes_project 11 96256669 96307649 + MGP_BALBcJ_P0031951 Arhgap23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031953.1 MGP_BALBcJ_G0018972.1 mouse_genomes_project 11 96296392 96307645 + MGP_BALBcJ_P0031953 Arhgap23 protein_coding protein_coding MGP_BALBcJ_T0030825.1 MGP_BALBcJ_G0018690.1 mouse_genomes_project 11 75846810 75851734 + MGP_BALBcJ_P0030825 Abhd15 protein_coding protein_coding MGP_BALBcJ_T0030826.1 MGP_BALBcJ_G0018690.1 mouse_genomes_project 11 75847673 75870304 + MGP_BALBcJ_P0030826 Abhd15 protein_coding protein_coding MGP_BALBcJ_T0030828.1 MGP_BALBcJ_G0018690.1 mouse_genomes_project 11 75850306 75870302 + MGP_BALBcJ_P0030828 Abhd15 protein_coding protein_coding MGP_BALBcJ_T0012675.1 MGP_BALBcJ_G0010772.1 mouse_genomes_project 11 82212378 82212567 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031155.1 MGP_BALBcJ_G0018771.1 mouse_genomes_project 11 81250044 81320782 - MGP_BALBcJ_P0031155 Rffl protein_coding protein_coding MGP_BALBcJ_T0031156.1 MGP_BALBcJ_G0018771.1 mouse_genomes_project 11 81252221 81294494 - MGP_BALBcJ_P0031156 Rffl protein_coding protein_coding MGP_BALBcJ_T0031157.1 MGP_BALBcJ_G0018771.1 mouse_genomes_project 11 81253635 81277361 - MGP_BALBcJ_P0031157 Rffl protein_coding protein_coding MGP_BALBcJ_T0031158.1 MGP_BALBcJ_G0018771.1 mouse_genomes_project 11 81258882 81294738 - MGP_BALBcJ_P0031158 Rffl protein_coding protein_coding MGP_BALBcJ_T0012735.1 MGP_BALBcJ_G0010832.1 mouse_genomes_project 11 104047222 104048262 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099261.1 MGP_BALBcJ_G0037297.1 mouse_genomes_project 11 70203410 70203513 + Gm23226 snRNA snRNA MGP_BALBcJ_T0030219.1 MGP_BALBcJ_G0018540.1 mouse_genomes_project 11 68680322 68681863 + MGP_BALBcJ_P0030219 Gltpd2 protein_coding protein_coding MGP_BALBcJ_T0030220.1 MGP_BALBcJ_G0018540.1 mouse_genomes_project 11 68680765 68681646 + MGP_BALBcJ_P0030220 Gltpd2 protein_coding protein_coding MGP_BALBcJ_T0029443.1 MGP_BALBcJ_G0018370.1 mouse_genomes_project 11 58922759 58943888 + MGP_BALBcJ_P0029443 Map2k3 protein_coding protein_coding MGP_BALBcJ_T0029444.1 MGP_BALBcJ_G0018370.1 mouse_genomes_project 11 58922780 58938647 + Map2k3 protein_coding retained_intron MGP_BALBcJ_T0029445.1 MGP_BALBcJ_G0018370.1 mouse_genomes_project 11 58922780 58933172 + Map2k3 protein_coding retained_intron MGP_BALBcJ_T0029446.1 MGP_BALBcJ_G0018370.1 mouse_genomes_project 11 58922792 58943871 + MGP_BALBcJ_P0029446 Map2k3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029447.1 MGP_BALBcJ_G0018370.1 mouse_genomes_project 11 58932935 58937827 + Map2k3 protein_coding processed_transcript MGP_BALBcJ_T0029448.1 MGP_BALBcJ_G0018370.1 mouse_genomes_project 11 58941738 58942898 + Map2k3 protein_coding retained_intron MGP_BALBcJ_T0034234.1 MGP_BALBcJ_G0019496.1 mouse_genomes_project 11 121116989 121123531 + Ptchd3 protein_coding retained_intron MGP_BALBcJ_T0034235.1 MGP_BALBcJ_G0019496.1 mouse_genomes_project 11 121116989 121130166 + MGP_BALBcJ_P0034235 Ptchd3 protein_coding protein_coding MGP_BALBcJ_T0029093.1 MGP_BALBcJ_G0018259.1 mouse_genomes_project 11 52636942 52669302 - MGP_BALBcJ_P0029093 Lyrm7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029094.1 MGP_BALBcJ_G0018259.1 mouse_genomes_project 11 52649875 52668994 - MGP_BALBcJ_P0029094 Lyrm7 protein_coding protein_coding MGP_BALBcJ_T0029095.1 MGP_BALBcJ_G0018259.1 mouse_genomes_project 11 52649876 52668974 - MGP_BALBcJ_P0029095 Lyrm7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029096.1 MGP_BALBcJ_G0018259.1 mouse_genomes_project 11 52651155 52661121 - Lyrm7 protein_coding retained_intron MGP_BALBcJ_T0029097.1 MGP_BALBcJ_G0018259.1 mouse_genomes_project 11 52651195 52668995 - Lyrm7 protein_coding processed_transcript MGP_BALBcJ_T0029098.1 MGP_BALBcJ_G0018259.1 mouse_genomes_project 11 52660808 52668971 - Lyrm7 protein_coding retained_intron MGP_BALBcJ_T0012589.1 MGP_BALBcJ_G0010686.1 mouse_genomes_project 11 53375397 53375867 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030378.1 MGP_BALBcJ_G0018568.1 mouse_genomes_project 11 70223021 70224272 + MGP_BALBcJ_P0030378 Fam64a protein_coding protein_coding MGP_BALBcJ_T0030379.1 MGP_BALBcJ_G0018568.1 mouse_genomes_project 11 70223444 70228360 + MGP_BALBcJ_P0030379 Fam64a protein_coding protein_coding MGP_BALBcJ_T0030380.1 MGP_BALBcJ_G0018568.1 mouse_genomes_project 11 70223491 70224654 + Fam64a protein_coding processed_transcript MGP_BALBcJ_T0030381.1 MGP_BALBcJ_G0018568.1 mouse_genomes_project 11 70223513 70227083 + Fam64a protein_coding processed_transcript MGP_BALBcJ_T0030382.1 MGP_BALBcJ_G0018568.1 mouse_genomes_project 11 70223911 70226030 + MGP_BALBcJ_P0030382 Fam64a protein_coding protein_coding MGP_BALBcJ_T0031209.1 MGP_BALBcJ_G0018787.1 mouse_genomes_project 11 81943353 81950837 - MGP_BALBcJ_P0031209 Gas2l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031210.1 MGP_BALBcJ_G0018787.1 mouse_genomes_project 11 81943353 81950837 - MGP_BALBcJ_P0031210 Gas2l2 protein_coding protein_coding MGP_BALBcJ_T0027759.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1404525 1518930 - MGP_BALBcJ_P0027759 Mtmr3 protein_coding protein_coding MGP_BALBcJ_T0027760.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1404532 1412024 - Mtmr3 protein_coding processed_transcript MGP_BALBcJ_T0027761.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1404532 1471776 - MGP_BALBcJ_P0027761 Mtmr3 protein_coding protein_coding MGP_BALBcJ_T0027762.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1404547 1453253 - MGP_BALBcJ_P0027762 Mtmr3 protein_coding protein_coding MGP_BALBcJ_T0027763.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1406216 1518978 - MGP_BALBcJ_P0027763 Mtmr3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027764.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1406409 1453253 - MGP_BALBcJ_P0027764 Mtmr3 protein_coding protein_coding MGP_BALBcJ_T0027765.1 MGP_BALBcJ_G0017924.1 mouse_genomes_project 11 1415464 1416976 - Mtmr3 protein_coding processed_transcript MGP_BALBcJ_T0029805.1 MGP_BALBcJ_G0018449.1 mouse_genomes_project 11 67041100 67062772 - MGP_BALBcJ_P0029805 Arhgef15 protein_coding protein_coding MGP_BALBcJ_T0029806.1 MGP_BALBcJ_G0018449.1 mouse_genomes_project 11 67041102 67065181 - MGP_BALBcJ_P0029806 Arhgef15 protein_coding protein_coding MGP_BALBcJ_T0029807.1 MGP_BALBcJ_G0018449.1 mouse_genomes_project 11 67042472 67045326 - Arhgef15 protein_coding processed_transcript MGP_BALBcJ_T0029808.1 MGP_BALBcJ_G0018449.1 mouse_genomes_project 11 67044246 67055516 - Arhgef15 protein_coding processed_transcript MGP_BALBcJ_T0029809.1 MGP_BALBcJ_G0018449.1 mouse_genomes_project 11 67044392 67055356 - Arhgef15 protein_coding processed_transcript MGP_BALBcJ_T0029810.1 MGP_BALBcJ_G0018449.1 mouse_genomes_project 11 67055927 67059872 - Arhgef15 protein_coding retained_intron MGP_BALBcJ_T0032047.1 MGP_BALBcJ_G0018994.1 mouse_genomes_project 11 97162677 97166911 - MGP_BALBcJ_P0032047 Neurod2 protein_coding protein_coding MGP_BALBcJ_T0029706.1 MGP_BALBcJ_G0018424.1 mouse_genomes_project 11 65092935 65105591 + MGP_BALBcJ_P0029706 Sco1 protein_coding protein_coding MGP_BALBcJ_T0029707.1 MGP_BALBcJ_G0018424.1 mouse_genomes_project 11 65092935 65105830 + MGP_BALBcJ_P0029707 Sco1 protein_coding protein_coding MGP_BALBcJ_T0029708.1 MGP_BALBcJ_G0018424.1 mouse_genomes_project 11 65094034 65104336 + Sco1 protein_coding processed_transcript MGP_BALBcJ_T0029709.1 MGP_BALBcJ_G0018424.1 mouse_genomes_project 11 65098586 65107328 + Sco1 protein_coding processed_transcript MGP_BALBcJ_T0003120.1 MGP_BALBcJ_G0002896.1 mouse_genomes_project 11 26712548 26714772 + Gm12089 antisense antisense MGP_BALBcJ_T0031334.1 MGP_BALBcJ_G0018820.1 mouse_genomes_project 11 83744282 83793258 - MGP_BALBcJ_P0031334 Appbp2 protein_coding protein_coding MGP_BALBcJ_T0099232.1 MGP_BALBcJ_G0037268.1 mouse_genomes_project 11 13742999 13743106 - Gm25698 snRNA snRNA MGP_BALBcJ_T0031232.1 MGP_BALBcJ_G0018796.1 mouse_genomes_project 11 82177288 82178800 - MGP_BALBcJ_P0031232 Ccl3 protein_coding protein_coding MGP_BALBcJ_T0030671.1 MGP_BALBcJ_G0018658.1 mouse_genomes_project 11 73877525 73925819 + MGP_BALBcJ_P0030671 Pitpna protein_coding protein_coding MGP_BALBcJ_T0030672.1 MGP_BALBcJ_G0018658.1 mouse_genomes_project 11 73877536 73925793 + MGP_BALBcJ_P0030672 Pitpna protein_coding protein_coding MGP_BALBcJ_T0030673.1 MGP_BALBcJ_G0018658.1 mouse_genomes_project 11 73877547 73923745 + MGP_BALBcJ_P0030673 Pitpna protein_coding protein_coding MGP_BALBcJ_T0030674.1 MGP_BALBcJ_G0018658.1 mouse_genomes_project 11 73877587 73887986 + Pitpna protein_coding retained_intron MGP_BALBcJ_T0030675.1 MGP_BALBcJ_G0018658.1 mouse_genomes_project 11 73877587 73923448 + MGP_BALBcJ_P0030675 Pitpna protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030676.1 MGP_BALBcJ_G0018658.1 mouse_genomes_project 11 73917510 73923321 + Pitpna protein_coding processed_transcript MGP_BALBcJ_T0032221.1 MGP_BALBcJ_G0019061.1 mouse_genomes_project 11 98733831 98734736 - MGP_BALBcJ_P0032221 protein_coding protein_coding MGP_BALBcJ_T0012660.1 MGP_BALBcJ_G0010757.1 mouse_genomes_project 11 76936559 76936841 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028360.1 MGP_BALBcJ_G0018059.1 mouse_genomes_project 11 28124257 28132313 + MGP_BALBcJ_P0028360 Gpr75 protein_coding protein_coding MGP_BALBcJ_T0034161.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120243912 120280332 - MGP_BALBcJ_P0034161 Csnk1d protein_coding protein_coding MGP_BALBcJ_T0034162.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120243912 120280094 - MGP_BALBcJ_P0034162 Csnk1d protein_coding protein_coding MGP_BALBcJ_T0034163.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120245811 120247851 - Csnk1d protein_coding processed_transcript MGP_BALBcJ_T0034164.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120245936 120253790 - Csnk1d protein_coding processed_transcript MGP_BALBcJ_T0034165.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120249776 120250226 - Csnk1d protein_coding processed_transcript MGP_BALBcJ_T0034166.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120254636 120279873 - MGP_BALBcJ_P0034166 Csnk1d protein_coding protein_coding MGP_BALBcJ_T0034167.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120254654 120279989 - MGP_BALBcJ_P0034167 Csnk1d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034168.1 MGP_BALBcJ_G0019476.1 mouse_genomes_project 11 120264984 120280053 - Csnk1d protein_coding retained_intron MGP_BALBcJ_T0029438.1 MGP_BALBcJ_G0018368.1 mouse_genomes_project 11 58847034 58861693 - MGP_BALBcJ_P0029438 Tmem11 protein_coding protein_coding MGP_BALBcJ_T0029439.1 MGP_BALBcJ_G0018368.1 mouse_genomes_project 11 58847034 58861927 - MGP_BALBcJ_P0029439 Tmem11 protein_coding protein_coding MGP_BALBcJ_T0029440.1 MGP_BALBcJ_G0018368.1 mouse_genomes_project 11 58847569 58861442 - MGP_BALBcJ_P0029440 Tmem11 protein_coding protein_coding MGP_BALBcJ_T0030764.1 MGP_BALBcJ_G0018677.1 mouse_genomes_project 11 75002779 75022420 + MGP_BALBcJ_P0030764 Tusc5 protein_coding protein_coding MGP_BALBcJ_T0027818.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 1999696 2037227 - MGP_BALBcJ_P0027818 Ewsr1 protein_coding protein_coding MGP_BALBcJ_T0027819.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 1999705 2037028 - MGP_BALBcJ_P0027819 Ewsr1 protein_coding protein_coding MGP_BALBcJ_T0027820.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 1999981 2003941 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0027821.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2001292 2013357 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0027822.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2001602 2012350 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0027823.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2001705 2013728 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0027824.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2001705 2016169 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0027825.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2003113 2012380 - MGP_BALBcJ_P0027825 Ewsr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0027826.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2014246 2037027 - MGP_BALBcJ_P0027826 Ewsr1 protein_coding protein_coding MGP_BALBcJ_T0027827.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2015850 2024057 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0027828.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2016077 2036982 - MGP_BALBcJ_P0027828 Ewsr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0027829.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2028448 2037057 - MGP_BALBcJ_P0027829 Ewsr1 protein_coding protein_coding MGP_BALBcJ_T0027830.1 MGP_BALBcJ_G0017937.1 mouse_genomes_project 11 2031269 2037028 - Ewsr1 protein_coding processed_transcript MGP_BALBcJ_T0003294.1 MGP_BALBcJ_G0003041.1 mouse_genomes_project 11 104197161 104201302 - 1700052K11Rik antisense antisense MGP_BALBcJ_T0099239.1 MGP_BALBcJ_G0037275.1 mouse_genomes_project 11 23403339 23403503 - Gm22868 snRNA snRNA MGP_BALBcJ_T0031746.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94006886 94043188 - MGP_BALBcJ_P0031746 Kat7 protein_coding protein_coding MGP_BALBcJ_T0031747.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94006886 94043188 - MGP_BALBcJ_P0031747 Kat7 protein_coding protein_coding MGP_BALBcJ_T0031748.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94006886 94042544 - MGP_BALBcJ_P0031748 Kat7 protein_coding protein_coding MGP_BALBcJ_T0031749.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94006886 94042544 - MGP_BALBcJ_P0031749 Kat7 protein_coding protein_coding MGP_BALBcJ_T0031750.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94006886 94043143 - MGP_BALBcJ_P0031750 Kat7 protein_coding protein_coding MGP_BALBcJ_T0031751.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94007950 94014521 - MGP_BALBcJ_P0031751 Kat7 protein_coding protein_coding MGP_BALBcJ_T0031752.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94014528 94043131 - Kat7 protein_coding processed_transcript MGP_BALBcJ_T0031753.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94016767 94023939 - Kat7 protein_coding processed_transcript MGP_BALBcJ_T0031754.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94034222 94043150 - Kat7 protein_coding processed_transcript MGP_BALBcJ_T0031755.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94035864 94042455 - Kat7 protein_coding processed_transcript MGP_BALBcJ_T0031756.1 MGP_BALBcJ_G0018921.1 mouse_genomes_project 11 94038776 94042511 - Kat7 protein_coding processed_transcript MGP_BALBcJ_T0033897.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 118864753 119079675 + Rptor protein_coding retained_intron MGP_BALBcJ_T0033898.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 118864843 119037884 + Rptor protein_coding retained_intron MGP_BALBcJ_T0033899.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 118864863 119101522 + Rptor protein_coding retained_intron MGP_BALBcJ_T0033900.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 118864997 119157071 + MGP_BALBcJ_P0033900 Rptor protein_coding protein_coding MGP_BALBcJ_T0033901.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 118865546 119157240 + MGP_BALBcJ_P0033901 Rptor protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033902.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 118918048 119123171 + Rptor protein_coding retained_intron MGP_BALBcJ_T0033903.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 119054384 119103432 + MGP_BALBcJ_P0033903 Rptor protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033904.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 119066871 119124956 + Rptor protein_coding retained_intron MGP_BALBcJ_T0033905.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 119079445 119113200 + MGP_BALBcJ_P0033905 Rptor protein_coding protein_coding MGP_BALBcJ_T0033906.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 119113160 119153850 + MGP_BALBcJ_P0033906 Rptor protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033907.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 119113210 119114704 + Rptor protein_coding retained_intron MGP_BALBcJ_T0033908.1 MGP_BALBcJ_G0019428.1 mouse_genomes_project 11 119114345 119142715 + MGP_BALBcJ_P0033908 Rptor protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100527.1 MGP_BALBcJ_G0038563.1 mouse_genomes_project 11 75575049 75575137 - Gm24989 snoRNA snoRNA MGP_BALBcJ_T0027875.1 MGP_BALBcJ_G0017949.1 mouse_genomes_project 11 2786084 2795988 - MGP_BALBcJ_P0027875 Polm protein_coding protein_coding MGP_BALBcJ_T0027876.1 MGP_BALBcJ_G0017949.1 mouse_genomes_project 11 2786085 2796215 - MGP_BALBcJ_P0027876 Polm protein_coding protein_coding MGP_BALBcJ_T0027877.1 MGP_BALBcJ_G0017949.1 mouse_genomes_project 11 2787439 2788425 - Polm protein_coding processed_transcript MGP_BALBcJ_T0027878.1 MGP_BALBcJ_G0017949.1 mouse_genomes_project 11 2792998 2794685 - Polm protein_coding processed_transcript MGP_BALBcJ_T0027879.1 MGP_BALBcJ_G0017949.1 mouse_genomes_project 11 2794477 2795951 - Polm protein_coding processed_transcript MGP_BALBcJ_T0027880.1 MGP_BALBcJ_G0017949.1 mouse_genomes_project 11 2794500 2795992 - Polm protein_coding processed_transcript MGP_BALBcJ_T0028780.1 MGP_BALBcJ_G0018180.1 mouse_genomes_project 11 47725997 47729902 + 3010026O09Rik protein_coding processed_transcript MGP_BALBcJ_T0028781.1 MGP_BALBcJ_G0018180.1 mouse_genomes_project 11 47726402 47751803 + MGP_BALBcJ_P0028781 3010026O09Rik protein_coding protein_coding MGP_BALBcJ_T0028782.1 MGP_BALBcJ_G0018180.1 mouse_genomes_project 11 47726460 47748648 + MGP_BALBcJ_P0028782 3010026O09Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003105.1 MGP_BALBcJ_G0002886.1 mouse_genomes_project 11 8864444 8882194 + 1700042O10Rik antisense antisense MGP_BALBcJ_T0030598.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73183546 73203181 - MGP_BALBcJ_P0030598 Srr protein_coding protein_coding MGP_BALBcJ_T0030599.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73183696 73203058 - Srr protein_coding processed_transcript MGP_BALBcJ_T0030600.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73183980 73203156 - MGP_BALBcJ_P0030600 Srr protein_coding protein_coding MGP_BALBcJ_T0030601.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73183986 73203331 - MGP_BALBcJ_P0030601 Srr protein_coding protein_coding MGP_BALBcJ_T0030602.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73184006 73203156 - MGP_BALBcJ_P0030602 Srr protein_coding protein_coding MGP_BALBcJ_T0030603.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73186928 73203065 - MGP_BALBcJ_P0030603 Srr protein_coding protein_coding MGP_BALBcJ_T0030604.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73187409 73203043 - MGP_BALBcJ_P0030604 Srr protein_coding protein_coding MGP_BALBcJ_T0030605.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73187554 73203086 - Srr protein_coding retained_intron MGP_BALBcJ_T0030606.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73187639 73203058 - Srr protein_coding retained_intron MGP_BALBcJ_T0030607.1 MGP_BALBcJ_G0018642.1 mouse_genomes_project 11 73188297 73203041 - MGP_BALBcJ_P0030607 Srr protein_coding protein_coding MGP_BALBcJ_T0012582.1 MGP_BALBcJ_G0010679.1 mouse_genomes_project 11 51960905 51962036 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028923.1 MGP_BALBcJ_G0018219.1 mouse_genomes_project 11 49623355 49640557 - MGP_BALBcJ_P0028923 Ube2b protein_coding protein_coding MGP_BALBcJ_T0028924.1 MGP_BALBcJ_G0018219.1 mouse_genomes_project 11 49624525 49640835 - MGP_BALBcJ_P0028924 Ube2b protein_coding protein_coding MGP_BALBcJ_T0028925.1 MGP_BALBcJ_G0018219.1 mouse_genomes_project 11 49637645 49640552 - Ube2b protein_coding processed_transcript MGP_BALBcJ_T0028926.1 MGP_BALBcJ_G0018219.1 mouse_genomes_project 11 49637721 49640835 - Ube2b protein_coding processed_transcript MGP_BALBcJ_T0029426.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58768545 58791879 - MGP_BALBcJ_P0029426 Shmt1 protein_coding protein_coding MGP_BALBcJ_T0029427.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58769342 58780017 - Shmt1 protein_coding processed_transcript MGP_BALBcJ_T0029428.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58769585 58787635 - MGP_BALBcJ_P0029428 Shmt1 protein_coding protein_coding MGP_BALBcJ_T0029429.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58769585 58787635 - MGP_BALBcJ_P0029429 Shmt1 protein_coding protein_coding MGP_BALBcJ_T0029430.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58769585 58787635 - MGP_BALBcJ_P0029430 Shmt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029431.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58769689 58775611 - Shmt1 protein_coding retained_intron MGP_BALBcJ_T0029432.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58770037 58773793 - Shmt1 protein_coding retained_intron MGP_BALBcJ_T0029433.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58773568 58778467 - Shmt1 protein_coding retained_intron MGP_BALBcJ_T0029434.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58777858 58791705 - Shmt1 protein_coding retained_intron MGP_BALBcJ_T0029435.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58779265 58783284 - Shmt1 protein_coding processed_transcript MGP_BALBcJ_T0029436.1 MGP_BALBcJ_G0018366.1 mouse_genomes_project 11 58784958 58794208 - Shmt1 protein_coding processed_transcript MGP_BALBcJ_T0032952.1 MGP_BALBcJ_G0019230.1 mouse_genomes_project 11 104993313 105015443 + MGP_BALBcJ_P0032952 Ace protein_coding protein_coding MGP_BALBcJ_T0032953.1 MGP_BALBcJ_G0019230.1 mouse_genomes_project 11 104996971 105014739 + MGP_BALBcJ_P0032953 Ace protein_coding protein_coding MGP_BALBcJ_T0032954.1 MGP_BALBcJ_G0019230.1 mouse_genomes_project 11 105000851 105014732 + MGP_BALBcJ_P0032954 Ace protein_coding protein_coding MGP_BALBcJ_T0032955.1 MGP_BALBcJ_G0019230.1 mouse_genomes_project 11 105002246 105010589 + Ace protein_coding processed_transcript MGP_BALBcJ_T0033028.1 MGP_BALBcJ_G0019252.1 mouse_genomes_project 11 105695523 105758774 - MGP_BALBcJ_P0033028 Pecam1 protein_coding protein_coding MGP_BALBcJ_T0033029.1 MGP_BALBcJ_G0019252.1 mouse_genomes_project 11 105695528 105758984 - MGP_BALBcJ_P0033029 Pecam1 protein_coding protein_coding MGP_BALBcJ_T0033030.1 MGP_BALBcJ_G0019252.1 mouse_genomes_project 11 105702491 105705239 - Pecam1 protein_coding retained_intron MGP_BALBcJ_T0033031.1 MGP_BALBcJ_G0019252.1 mouse_genomes_project 11 105703123 105797694 - MGP_BALBcJ_P0033031 Pecam1 protein_coding protein_coding MGP_BALBcJ_T0033032.1 MGP_BALBcJ_G0019252.1 mouse_genomes_project 11 105732698 105735491 - Pecam1 protein_coding retained_intron MGP_BALBcJ_T0033033.1 MGP_BALBcJ_G0019252.1 mouse_genomes_project 11 105735226 105758668 - MGP_BALBcJ_P0033033 Pecam1 protein_coding protein_coding MGP_BALBcJ_T0030497.1 MGP_BALBcJ_G0018599.1 mouse_genomes_project 11 71479147 71512809 + MGP_BALBcJ_P0030497 Trpv3 protein_coding protein_coding MGP_BALBcJ_T0006216.1 MGP_BALBcJ_G0005195.1 mouse_genomes_project 11 55791647 55794575 - Gm12249 lincRNA lincRNA MGP_BALBcJ_T0033342.1 MGP_BALBcJ_G0019323.1 mouse_genomes_project 11 114534349 114541500 - MGP_BALBcJ_P0033342 Ush1g protein_coding protein_coding MGP_BALBcJ_T0032406.1 MGP_BALBcJ_G0019122.1 mouse_genomes_project 11 100043608 100047222 - MGP_BALBcJ_P0032406 Psmc3ip protein_coding protein_coding MGP_BALBcJ_T0032407.1 MGP_BALBcJ_G0019122.1 mouse_genomes_project 11 100043917 100047186 - Psmc3ip protein_coding retained_intron MGP_BALBcJ_T0032408.1 MGP_BALBcJ_G0019122.1 mouse_genomes_project 11 100043942 100045946 - Psmc3ip protein_coding retained_intron MGP_BALBcJ_T0032409.1 MGP_BALBcJ_G0019122.1 mouse_genomes_project 11 100044272 100047162 - MGP_BALBcJ_P0032409 Psmc3ip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031353.1 MGP_BALBcJ_G0018824.1 mouse_genomes_project 11 84403447 84407423 - MGP_BALBcJ_P0031353 Gm11444 protein_coding protein_coding MGP_BALBcJ_T0031244.1 MGP_BALBcJ_G0018802.1 mouse_genomes_project 11 82379259 82436626 + MGP_BALBcJ_P0031244 Hnf1b protein_coding protein_coding MGP_BALBcJ_T0031245.1 MGP_BALBcJ_G0018802.1 mouse_genomes_project 11 82379434 82435741 + MGP_BALBcJ_P0031245 Hnf1b protein_coding protein_coding MGP_BALBcJ_T0031246.1 MGP_BALBcJ_G0018802.1 mouse_genomes_project 11 82380627 82393410 + MGP_BALBcJ_P0031246 Hnf1b protein_coding protein_coding MGP_BALBcJ_T0006319.1 MGP_BALBcJ_G0005271.1 mouse_genomes_project 11 108956462 108959097 + 1700023C21Rik lincRNA lincRNA MGP_BALBcJ_T0100499.1 MGP_BALBcJ_G0038535.1 mouse_genomes_project 11 27051886 27052026 + Gm22588 snoRNA snoRNA MGP_BALBcJ_T0011278.1 MGP_BALBcJ_G0009403.1 mouse_genomes_project 11 51461520 51461830 + Gm22275 misc_RNA misc_RNA MGP_BALBcJ_T0009650.1 MGP_BALBcJ_G0007775.1 mouse_genomes_project 11 47619039 47619137 + Mir340 miRNA miRNA MGP_BALBcJ_T0028917.1 MGP_BALBcJ_G0018216.1 mouse_genomes_project 11 49401383 49430315 + MGP_BALBcJ_P0028917 Sar1b protein_coding protein_coding MGP_BALBcJ_T0028918.1 MGP_BALBcJ_G0018216.1 mouse_genomes_project 11 49401390 49420853 + Sar1b protein_coding processed_transcript MGP_BALBcJ_T0012599.1 MGP_BALBcJ_G0010696.1 mouse_genomes_project 11 56367390 56367674 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012752.1 MGP_BALBcJ_G0010849.1 mouse_genomes_project 11 113539450 113540583 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033841.1 MGP_BALBcJ_G0019417.1 mouse_genomes_project 11 118332920 118341575 - MGP_BALBcJ_P0033841 Cbx4 protein_coding protein_coding MGP_BALBcJ_T0033842.1 MGP_BALBcJ_G0019417.1 mouse_genomes_project 11 118336722 118341575 - Cbx4 protein_coding processed_transcript MGP_BALBcJ_T0029823.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67096066 67118836 - MGP_BALBcJ_P0029823 Pfas protein_coding protein_coding MGP_BALBcJ_T0029824.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67096069 67104647 - Pfas protein_coding retained_intron MGP_BALBcJ_T0029825.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67096829 67100975 - Pfas protein_coding retained_intron MGP_BALBcJ_T0029826.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67098302 67101720 - MGP_BALBcJ_P0029826 Pfas protein_coding protein_coding MGP_BALBcJ_T0029827.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67101089 67102196 - Pfas protein_coding retained_intron MGP_BALBcJ_T0029828.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67103352 67108036 - MGP_BALBcJ_P0029828 Pfas protein_coding protein_coding MGP_BALBcJ_T0029829.1 MGP_BALBcJ_G0018452.1 mouse_genomes_project 11 67107325 67118827 - Pfas protein_coding retained_intron MGP_BALBcJ_T0033109.1 MGP_BALBcJ_G0019267.1 mouse_genomes_project 11 107015120 107429715 - MGP_BALBcJ_P0033109 Prkca protein_coding protein_coding MGP_BALBcJ_T0033110.1 MGP_BALBcJ_G0019267.1 mouse_genomes_project 11 107019936 107061700 - MGP_BALBcJ_P0033110 Prkca protein_coding protein_coding MGP_BALBcJ_T0033111.1 MGP_BALBcJ_G0019267.1 mouse_genomes_project 11 107060435 107097637 - Prkca protein_coding processed_transcript MGP_BALBcJ_T0033112.1 MGP_BALBcJ_G0019267.1 mouse_genomes_project 11 107275141 107429435 - Prkca protein_coding processed_transcript MGP_BALBcJ_T0033356.1 MGP_BALBcJ_G0019326.1 mouse_genomes_project 11 114602502 114616675 + MGP_BALBcJ_P0033356 Cdr2l protein_coding protein_coding MGP_BALBcJ_T0031205.1 MGP_BALBcJ_G0018786.1 mouse_genomes_project 11 81930588 81940286 + MGP_BALBcJ_P0031205 Rasl10b protein_coding protein_coding MGP_BALBcJ_T0031206.1 MGP_BALBcJ_G0018786.1 mouse_genomes_project 11 81931139 81942491 + MGP_BALBcJ_P0031206 Rasl10b protein_coding protein_coding MGP_BALBcJ_T0031207.1 MGP_BALBcJ_G0018786.1 mouse_genomes_project 11 81931139 81942489 + MGP_BALBcJ_P0031207 Rasl10b protein_coding protein_coding MGP_BALBcJ_T0031208.1 MGP_BALBcJ_G0018786.1 mouse_genomes_project 11 81931523 81942490 + MGP_BALBcJ_P0031208 Rasl10b protein_coding protein_coding MGP_BALBcJ_T0028118.1 MGP_BALBcJ_G0018007.1 mouse_genomes_project 11 17343991 17374083 - MGP_BALBcJ_P0028118 Slc1a4 protein_coding protein_coding MGP_BALBcJ_T0017216.1 MGP_BALBcJ_G0015145.1 mouse_genomes_project 11 99329721 99330466 + Gm12348 processed_transcript processed_transcript MGP_BALBcJ_T0012592.1 MGP_BALBcJ_G0010689.1 mouse_genomes_project 11 55694594 55694885 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017139.1 MGP_BALBcJ_G0015101.1 mouse_genomes_project 11 31257066 31379860 - 4930469K13Rik processed_transcript processed_transcript MGP_BALBcJ_T0033811.1 MGP_BALBcJ_G0019411.1 mouse_genomes_project 11 117676526 117692657 + MGP_BALBcJ_P0033811 C1qtnf1 protein_coding protein_coding MGP_BALBcJ_T0033812.1 MGP_BALBcJ_G0019411.1 mouse_genomes_project 11 117676804 117698777 + MGP_BALBcJ_P0033812 C1qtnf1 protein_coding protein_coding MGP_BALBcJ_T0033813.1 MGP_BALBcJ_G0019411.1 mouse_genomes_project 11 117682123 117698777 + MGP_BALBcJ_P0033813 C1qtnf1 protein_coding protein_coding MGP_BALBcJ_T0033814.1 MGP_BALBcJ_G0019411.1 mouse_genomes_project 11 117692286 117692664 + MGP_BALBcJ_P0033814 C1qtnf1 protein_coding protein_coding MGP_BALBcJ_T0027981.1 MGP_BALBcJ_G0017972.1 mouse_genomes_project 11 3810547 3812591 - Gm11983 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0027982.1 MGP_BALBcJ_G0017972.1 mouse_genomes_project 11 3811744 3812062 - MGP_BALBcJ_P0027982 Gm11983 protein_coding protein_coding MGP_BALBcJ_T0028866.1 MGP_BALBcJ_G0018204.1 mouse_genomes_project 11 48739758 48743037 + MGP_BALBcJ_P0028866 protein_coding protein_coding MGP_BALBcJ_T0032226.1 MGP_BALBcJ_G0019066.1 mouse_genomes_project 11 98783224 98795087 + MGP_BALBcJ_P0032226 Gm11559 protein_coding protein_coding MGP_BALBcJ_T0028276.1 MGP_BALBcJ_G0018042.1 mouse_genomes_project 11 26036465 26114703 + MGP_BALBcJ_P0028276 Efemp1 protein_coding protein_coding MGP_BALBcJ_T0028277.1 MGP_BALBcJ_G0018042.1 mouse_genomes_project 11 26036505 26109476 + Efemp1 protein_coding processed_transcript MGP_BALBcJ_T0028278.1 MGP_BALBcJ_G0018042.1 mouse_genomes_project 11 26103618 26114703 + MGP_BALBcJ_P0028278 Efemp1 protein_coding protein_coding MGP_BALBcJ_T0027916.1 MGP_BALBcJ_G0017958.1 mouse_genomes_project 11 3160767 3180015 - MGP_BALBcJ_P0027916 Npc1l1 protein_coding protein_coding MGP_BALBcJ_T0028047.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8942350 9003290 - MGP_BALBcJ_P0028047 Grb10 protein_coding protein_coding MGP_BALBcJ_T0028048.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8948521 8950420 - Grb10 protein_coding processed_transcript MGP_BALBcJ_T0028049.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8956699 8958138 - Grb10 protein_coding processed_transcript MGP_BALBcJ_T0028050.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8961407 8967814 - Grb10 protein_coding processed_transcript MGP_BALBcJ_T0028051.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8966538 9050492 - MGP_BALBcJ_P0028051 Grb10 protein_coding protein_coding MGP_BALBcJ_T0028052.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8979326 9038704 - MGP_BALBcJ_P0028052 Grb10 protein_coding protein_coding MGP_BALBcJ_T0028053.1 MGP_BALBcJ_G0017989.1 mouse_genomes_project 11 8979420 9039133 - MGP_BALBcJ_P0028053 Grb10 protein_coding protein_coding MGP_BALBcJ_T0029325.1 MGP_BALBcJ_G0018346.1 mouse_genomes_project 11 57715924 57734486 - MGP_BALBcJ_P0029325 Flcn protein_coding protein_coding MGP_BALBcJ_T0029326.1 MGP_BALBcJ_G0018346.1 mouse_genomes_project 11 57715973 57734394 - Flcn protein_coding retained_intron MGP_BALBcJ_T0029327.1 MGP_BALBcJ_G0018346.1 mouse_genomes_project 11 57716306 57734058 - MGP_BALBcJ_P0029327 Flcn protein_coding protein_coding MGP_BALBcJ_T0029328.1 MGP_BALBcJ_G0018346.1 mouse_genomes_project 11 57728228 57734071 - Flcn protein_coding processed_transcript MGP_BALBcJ_T0029329.1 MGP_BALBcJ_G0018346.1 mouse_genomes_project 11 57728991 57734464 - MGP_BALBcJ_P0029329 Flcn protein_coding protein_coding MGP_BALBcJ_T0029330.1 MGP_BALBcJ_G0018346.1 mouse_genomes_project 11 57733497 57734181 - Flcn protein_coding retained_intron MGP_BALBcJ_T0027854.1 MGP_BALBcJ_G0017942.1 mouse_genomes_project 11 2478875 2484688 + MGP_BALBcJ_P0027854 Xbp1 protein_coding protein_coding MGP_BALBcJ_T0027855.1 MGP_BALBcJ_G0017942.1 mouse_genomes_project 11 2479221 2482797 + Xbp1 protein_coding retained_intron MGP_BALBcJ_T0027856.1 MGP_BALBcJ_G0017942.1 mouse_genomes_project 11 2479879 2483714 + MGP_BALBcJ_P0027856 Xbp1 protein_coding protein_coding MGP_BALBcJ_T0027857.1 MGP_BALBcJ_G0017942.1 mouse_genomes_project 11 2480126 2483876 + MGP_BALBcJ_P0027857 Xbp1 protein_coding protein_coding MGP_BALBcJ_T0030409.1 MGP_BALBcJ_G0018576.1 mouse_genomes_project 11 70504405 70509815 + MGP_BALBcJ_P0030409 Fbxo39 protein_coding protein_coding MGP_BALBcJ_T0009722.1 MGP_BALBcJ_G0007847.1 mouse_genomes_project 11 99370517 99370598 - Gm27374 miRNA miRNA MGP_BALBcJ_T0032203.1 MGP_BALBcJ_G0019043.1 mouse_genomes_project 11 98461593 98462634 - MGP_BALBcJ_P0032203 Krtap1-5 protein_coding protein_coding MGP_BALBcJ_T0017250.1 MGP_BALBcJ_G0015161.1 mouse_genomes_project 11 119446481 119449862 - 2810410L24Rik processed_transcript processed_transcript MGP_BALBcJ_T0017251.1 MGP_BALBcJ_G0015161.1 mouse_genomes_project 11 119448816 119450963 - 2810410L24Rik processed_transcript processed_transcript MGP_BALBcJ_T0029858.1 MGP_BALBcJ_G0018457.1 mouse_genomes_project 11 67201524 67205419 + MGP_BALBcJ_P0029858 Vamp2 protein_coding protein_coding MGP_BALBcJ_T0029859.1 MGP_BALBcJ_G0018457.1 mouse_genomes_project 11 67201544 67203725 + MGP_BALBcJ_P0029859 Vamp2 protein_coding protein_coding MGP_BALBcJ_T0029860.1 MGP_BALBcJ_G0018457.1 mouse_genomes_project 11 67201556 67202710 + Vamp2 protein_coding retained_intron MGP_BALBcJ_T0029861.1 MGP_BALBcJ_G0018457.1 mouse_genomes_project 11 67201577 67203085 + Vamp2 protein_coding processed_transcript MGP_BALBcJ_T0029862.1 MGP_BALBcJ_G0018457.1 mouse_genomes_project 11 67202640 67203211 + Vamp2 protein_coding retained_intron MGP_BALBcJ_T0033556.1 MGP_BALBcJ_G0019359.1 mouse_genomes_project 11 115379552 115386576 - MGP_BALBcJ_P0033556 Mrpl38 protein_coding protein_coding MGP_BALBcJ_T0033557.1 MGP_BALBcJ_G0019359.1 mouse_genomes_project 11 115379556 115386483 - Mrpl38 protein_coding retained_intron MGP_BALBcJ_T0033558.1 MGP_BALBcJ_G0019359.1 mouse_genomes_project 11 115380520 115386497 - Mrpl38 protein_coding retained_intron MGP_BALBcJ_T0033559.1 MGP_BALBcJ_G0019359.1 mouse_genomes_project 11 115381784 115382179 - Mrpl38 protein_coding retained_intron MGP_BALBcJ_T0033560.1 MGP_BALBcJ_G0019359.1 mouse_genomes_project 11 115381978 115382350 - Mrpl38 protein_coding retained_intron MGP_BALBcJ_T0033561.1 MGP_BALBcJ_G0019359.1 mouse_genomes_project 11 115385487 115386573 - Mrpl38 protein_coding retained_intron MGP_BALBcJ_T0028083.1 MGP_BALBcJ_G0017996.1 mouse_genomes_project 11 14070013 14073429 + MGP_BALBcJ_P0028083 Cnrip1 protein_coding protein_coding MGP_BALBcJ_T0028084.1 MGP_BALBcJ_G0017996.1 mouse_genomes_project 11 14070230 14072666 + Cnrip1 protein_coding retained_intron MGP_BALBcJ_T0028085.1 MGP_BALBcJ_G0017996.1 mouse_genomes_project 11 14070245 14092416 + MGP_BALBcJ_P0028085 Cnrip1 protein_coding protein_coding MGP_BALBcJ_T0028431.1 MGP_BALBcJ_G0018075.1 mouse_genomes_project 11 29548794 29549417 + MGP_BALBcJ_P0028431 protein_coding protein_coding MGP_BALBcJ_T0029119.1 MGP_BALBcJ_G0018264.1 mouse_genomes_project 11 52859543 52888740 - MGP_BALBcJ_P0029119 Ccdc69 protein_coding protein_coding MGP_BALBcJ_T0029120.1 MGP_BALBcJ_G0018264.1 mouse_genomes_project 11 52860542 52888764 - MGP_BALBcJ_P0029120 Ccdc69 protein_coding protein_coding MGP_BALBcJ_T0100525.1 MGP_BALBcJ_G0038561.1 mouse_genomes_project 11 73183296 73183387 + Gm22771 snoRNA snoRNA MGP_BALBcJ_T0100481.1 MGP_BALBcJ_G0038517.1 mouse_genomes_project 11 2514692 2514822 - Gm22471 snoRNA snoRNA MGP_BALBcJ_T0099229.1 MGP_BALBcJ_G0037265.1 mouse_genomes_project 11 4868863 4868925 - Gm27393 snRNA snRNA MGP_BALBcJ_T0098458.1 MGP_BALBcJ_G0036512.1 mouse_genomes_project 11 55571821 55571940 + n-R5s69 rRNA rRNA MGP_BALBcJ_T0003249.1 MGP_BALBcJ_G0003004.1 mouse_genomes_project 11 94109723 94118697 - Gm29477 antisense antisense MGP_BALBcJ_T0099274.1 MGP_BALBcJ_G0037310.1 mouse_genomes_project 11 84047580 84047727 + Gm23765 snRNA snRNA MGP_BALBcJ_T0033494.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115135941 115138483 - Recql5 protein_coding retained_intron MGP_BALBcJ_T0033495.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115135941 115177335 - MGP_BALBcJ_P0033495 Recql5 protein_coding protein_coding MGP_BALBcJ_T0033496.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115135941 115177335 - MGP_BALBcJ_P0033496 Recql5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033497.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115138761 115171243 - MGP_BALBcJ_P0033497 Recql5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033498.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115139611 115177335 - Recql5 protein_coding retained_intron MGP_BALBcJ_T0033499.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115140155 115150594 - Recql5 protein_coding processed_transcript MGP_BALBcJ_T0033504.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115158345 115177335 - MGP_BALBcJ_P0033504 Recql5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033505.1 MGP_BALBcJ_G0019347.1 mouse_genomes_project 11 115169282 115171411 - Recql5 protein_coding retained_intron MGP_BALBcJ_T0030161.1 MGP_BALBcJ_G0018525.1 mouse_genomes_project 11 68371421 68375625 - MGP_BALBcJ_P0030161 Slc16a13 protein_coding protein_coding MGP_BALBcJ_T0030162.1 MGP_BALBcJ_G0018525.1 mouse_genomes_project 11 68373370 68375439 - MGP_BALBcJ_P0030162 Slc16a13 protein_coding protein_coding MGP_BALBcJ_T0030163.1 MGP_BALBcJ_G0018525.1 mouse_genomes_project 11 68373808 68375695 - MGP_BALBcJ_P0030163 Slc16a13 protein_coding protein_coding MGP_BALBcJ_T0030164.1 MGP_BALBcJ_G0018525.1 mouse_genomes_project 11 68373921 68375415 - MGP_BALBcJ_P0030164 Slc16a13 protein_coding protein_coding MGP_BALBcJ_T0003170.1 MGP_BALBcJ_G0002941.1 mouse_genomes_project 11 58911647 58922594 - Map2k3os antisense antisense MGP_BALBcJ_T0003302.1 MGP_BALBcJ_G0003048.1 mouse_genomes_project 11 106074316 106076637 + antisense antisense MGP_BALBcJ_T0003303.1 MGP_BALBcJ_G0003048.1 mouse_genomes_project 11 106074421 106076642 + antisense antisense MGP_BALBcJ_T0032028.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96918027 96984533 - MGP_BALBcJ_P0032028 Fbxl20 protein_coding protein_coding MGP_BALBcJ_T0032029.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96926419 96984527 - Fbxl20 protein_coding retained_intron MGP_BALBcJ_T0032030.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96930403 96935198 - MGP_BALBcJ_P0032030 Fbxl20 protein_coding protein_coding MGP_BALBcJ_T0032031.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96933556 96985324 - MGP_BALBcJ_P0032031 Fbxl20 protein_coding protein_coding MGP_BALBcJ_T0032032.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96936903 96964214 - Fbxl20 protein_coding processed_transcript MGP_BALBcJ_T0032033.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96944691 96964214 - MGP_BALBcJ_P0032033 Fbxl20 protein_coding protein_coding MGP_BALBcJ_T0032034.1 MGP_BALBcJ_G0018991.1 mouse_genomes_project 11 96963233 96964198 - Fbxl20 protein_coding processed_transcript MGP_BALBcJ_T0012690.1 MGP_BALBcJ_G0010787.1 mouse_genomes_project 11 87068314 87068843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028495.1 MGP_BALBcJ_G0018099.1 mouse_genomes_project 11 33098449 33124598 - MGP_BALBcJ_P0028495 Rars protein_coding protein_coding MGP_BALBcJ_T0028496.1 MGP_BALBcJ_G0018099.1 mouse_genomes_project 11 33105736 33110178 - Rars protein_coding processed_transcript MGP_BALBcJ_T0028497.1 MGP_BALBcJ_G0018099.1 mouse_genomes_project 11 33107496 33111572 - Rars protein_coding retained_intron MGP_BALBcJ_T0028498.1 MGP_BALBcJ_G0018099.1 mouse_genomes_project 11 33111205 33115200 - Rars protein_coding retained_intron MGP_BALBcJ_T0028499.1 MGP_BALBcJ_G0018099.1 mouse_genomes_project 11 33116561 33124553 - Rars protein_coding processed_transcript MGP_BALBcJ_T0030087.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68121860 68133659 - MGP_BALBcJ_P0030087 Elp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030088.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68121862 68134831 - MGP_BALBcJ_P0030088 Elp5 protein_coding protein_coding MGP_BALBcJ_T0030089.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68121866 68133650 - Elp5 protein_coding retained_intron MGP_BALBcJ_T0030090.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68121870 68123042 - Elp5 protein_coding retained_intron MGP_BALBcJ_T0030091.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68122879 68133448 - MGP_BALBcJ_P0030091 Elp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030092.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68123153 68133648 - Elp5 protein_coding retained_intron MGP_BALBcJ_T0030093.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68124350 68133598 - Elp5 protein_coding retained_intron MGP_BALBcJ_T0030094.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68124368 68135218 - MGP_BALBcJ_P0030094 Elp5 protein_coding protein_coding MGP_BALBcJ_T0030095.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68128489 68136096 - MGP_BALBcJ_P0030095 Elp5 protein_coding protein_coding MGP_BALBcJ_T0030096.1 MGP_BALBcJ_G0018513.1 mouse_genomes_project 11 68133421 68134083 - MGP_BALBcJ_P0030096 Elp5 protein_coding protein_coding MGP_BALBcJ_T0012458.1 MGP_BALBcJ_G0010555.1 mouse_genomes_project 11 9135891 9138800 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012692.1 MGP_BALBcJ_G0010789.1 mouse_genomes_project 11 89205387 89206050 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030071.1 MGP_BALBcJ_G0018509.1 mouse_genomes_project 11 68070899 68075046 - MGP_BALBcJ_P0030071 Eif5a protein_coding protein_coding MGP_BALBcJ_T0030072.1 MGP_BALBcJ_G0018509.1 mouse_genomes_project 11 68071126 68074589 - MGP_BALBcJ_P0030072 Eif5a protein_coding protein_coding MGP_BALBcJ_T0006226.1 MGP_BALBcJ_G0005204.1 mouse_genomes_project 11 60766470 60769454 + Gm27194 lincRNA lincRNA MGP_BALBcJ_T0031552.1 MGP_BALBcJ_G0018874.1 mouse_genomes_project 11 88049883 88079920 - MGP_BALBcJ_P0031552 protein_coding protein_coding MGP_BALBcJ_T0030763.1 MGP_BALBcJ_G0018676.1 mouse_genomes_project 11 74994982 74996189 + MGP_BALBcJ_P0030763 Bhlha9 protein_coding protein_coding MGP_BALBcJ_T0030456.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71164435 71196283 + MGP_BALBcJ_P0030456 Atp2a3 protein_coding protein_coding MGP_BALBcJ_T0030457.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71164435 71196283 + MGP_BALBcJ_P0030457 Atp2a3 protein_coding protein_coding MGP_BALBcJ_T0030458.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71164435 71196283 + MGP_BALBcJ_P0030458 Atp2a3 protein_coding protein_coding MGP_BALBcJ_T0030459.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71164435 71196284 + MGP_BALBcJ_P0030459 Atp2a3 protein_coding protein_coding MGP_BALBcJ_T0030460.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71164435 71196284 + MGP_BALBcJ_P0030460 Atp2a3 protein_coding protein_coding MGP_BALBcJ_T0030461.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71164556 71174003 + Atp2a3 protein_coding retained_intron MGP_BALBcJ_T0030462.1 MGP_BALBcJ_G0018587.1 mouse_genomes_project 11 71185337 71186786 + Atp2a3 protein_coding processed_transcript MGP_BALBcJ_T0031084.1 MGP_BALBcJ_G0018750.1 mouse_genomes_project 11 78717963 78773818 + MGP_BALBcJ_P0031084 Rhbdl3 protein_coding protein_coding MGP_BALBcJ_T0031085.1 MGP_BALBcJ_G0018750.1 mouse_genomes_project 11 78737558 78742034 + Rhbdl3 protein_coding retained_intron MGP_BALBcJ_T0031086.1 MGP_BALBcJ_G0018750.1 mouse_genomes_project 11 78764384 78771543 + Rhbdl3 protein_coding retained_intron MGP_BALBcJ_T0006306.1 MGP_BALBcJ_G0005260.1 mouse_genomes_project 11 99028427 99034767 - Gm12347 lincRNA lincRNA MGP_BALBcJ_T0027979.1 MGP_BALBcJ_G0017971.1 mouse_genomes_project 11 3646769 3665586 + MGP_BALBcJ_P0027979 Ramp3 protein_coding protein_coding MGP_BALBcJ_T0027980.1 MGP_BALBcJ_G0017971.1 mouse_genomes_project 11 3646813 3665583 + Ramp3 protein_coding processed_transcript MGP_BALBcJ_T0012432.1 MGP_BALBcJ_G0010529.1 mouse_genomes_project 11 770372 771187 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031424.1 MGP_BALBcJ_G0018843.1 mouse_genomes_project 11 85949201 85979200 - MGP_BALBcJ_P0031424 Rad51c protein_coding protein_coding MGP_BALBcJ_T0031425.1 MGP_BALBcJ_G0018843.1 mouse_genomes_project 11 85951133 85979183 - MGP_BALBcJ_P0031425 Rad51c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031426.1 MGP_BALBcJ_G0018843.1 mouse_genomes_project 11 85951639 85979631 - MGP_BALBcJ_P0031426 Rad51c protein_coding protein_coding MGP_BALBcJ_T0031427.1 MGP_BALBcJ_G0018843.1 mouse_genomes_project 11 85951926 85979115 - MGP_BALBcJ_P0031427 Rad51c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031029.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77748512 77992779 + MGP_BALBcJ_P0031029 Nf1 protein_coding protein_coding MGP_BALBcJ_T0031030.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77748545 77995706 + MGP_BALBcJ_P0031030 Nf1 protein_coding protein_coding MGP_BALBcJ_T0031031.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77748772 77842208 + Nf1 protein_coding retained_intron MGP_BALBcJ_T0031032.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77757232 77888238 + MGP_BALBcJ_P0031032 Nf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0031033.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77859468 77885639 + Nf1 protein_coding processed_transcript MGP_BALBcJ_T0031034.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77859468 77885639 + Nf1 protein_coding processed_transcript MGP_BALBcJ_T0031044.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77950273 77983958 + Nf1 protein_coding retained_intron MGP_BALBcJ_T0031045.1 MGP_BALBcJ_G0018736.1 mouse_genomes_project 11 77959765 77993885 + MGP_BALBcJ_P0031045 Nf1 protein_coding protein_coding MGP_BALBcJ_T0034039.1 MGP_BALBcJ_G0019456.1 mouse_genomes_project 11 119864503 119875582 + MGP_BALBcJ_P0034039 Anapc11 protein_coding protein_coding MGP_BALBcJ_T0034040.1 MGP_BALBcJ_G0019456.1 mouse_genomes_project 11 119864522 119866771 + Anapc11 protein_coding retained_intron MGP_BALBcJ_T0034041.1 MGP_BALBcJ_G0019456.1 mouse_genomes_project 11 119864614 119873160 + MGP_BALBcJ_P0034041 Anapc11 protein_coding protein_coding MGP_BALBcJ_T0034042.1 MGP_BALBcJ_G0019456.1 mouse_genomes_project 11 119871327 119872876 + Anapc11 protein_coding processed_transcript MGP_BALBcJ_T0102146.1 MGP_BALBcJ_G0039963.1 mouse_genomes_project 11 72326702 72332397 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012719.1 MGP_BALBcJ_G0010816.1 mouse_genomes_project 11 100260635 100261274 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006240.1 MGP_BALBcJ_G0005215.1 mouse_genomes_project 11 69198165 69199738 - 6330403K07Rik lincRNA lincRNA MGP_BALBcJ_T0099293.1 MGP_BALBcJ_G0037329.1 mouse_genomes_project 11 100580505 100580696 + Gm26316 snRNA snRNA MGP_BALBcJ_T0030396.1 MGP_BALBcJ_G0018571.1 mouse_genomes_project 11 70391177 70394066 - MGP_BALBcJ_P0030396 Gm43951 protein_coding protein_coding MGP_BALBcJ_T0102154.1 MGP_BALBcJ_G0039971.1 mouse_genomes_project 11 82231922 82232066 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100493.1 MGP_BALBcJ_G0038529.1 mouse_genomes_project 11 19906990 19907092 + Gm23772 snoRNA snoRNA MGP_BALBcJ_T0031780.1 MGP_BALBcJ_G0018928.1 mouse_genomes_project 11 94461437 94520979 + MGP_BALBcJ_P0031780 Zfp652 protein_coding protein_coding MGP_BALBcJ_T0031781.1 MGP_BALBcJ_G0018928.1 mouse_genomes_project 11 94461960 94585092 + MGP_BALBcJ_P0031781 Zfp652 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031783.1 MGP_BALBcJ_G0018928.1 mouse_genomes_project 11 94498566 94520979 + MGP_BALBcJ_P0031783 Zfp652 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031784.1 MGP_BALBcJ_G0018928.1 mouse_genomes_project 11 94498633 94513348 + MGP_BALBcJ_P0031784 Zfp652 protein_coding protein_coding MGP_BALBcJ_T0028770.1 MGP_BALBcJ_G0018178.1 mouse_genomes_project 11 47573784 47654942 + MGP_BALBcJ_P0028770 Rnf130 protein_coding protein_coding MGP_BALBcJ_T0028771.1 MGP_BALBcJ_G0018178.1 mouse_genomes_project 11 47643857 47655136 + Rnf130 protein_coding processed_transcript MGP_BALBcJ_T0006351.1 MGP_BALBcJ_G0005295.1 mouse_genomes_project 11 118408196 118413574 + Gm26888 lincRNA lincRNA MGP_BALBcJ_T0030225.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68701417 68702538 + MGP_BALBcJ_P0030225 Pld2 protein_coding protein_coding MGP_BALBcJ_T0030226.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68701659 68720523 + MGP_BALBcJ_P0030226 Pld2 protein_coding protein_coding MGP_BALBcJ_T0030227.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68701696 68720523 + MGP_BALBcJ_P0030227 Pld2 protein_coding protein_coding MGP_BALBcJ_T0030228.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68701709 68707747 + MGP_BALBcJ_P0030228 Pld2 protein_coding protein_coding MGP_BALBcJ_T0030229.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68716039 68719516 + Pld2 protein_coding retained_intron MGP_BALBcJ_T0030230.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68718054 68719640 + MGP_BALBcJ_P0030230 Pld2 protein_coding protein_coding MGP_BALBcJ_T0030231.1 MGP_BALBcJ_G0018542.1 mouse_genomes_project 11 68718219 68719890 + Pld2 protein_coding retained_intron MGP_BALBcJ_T0031189.1 MGP_BALBcJ_G0018782.1 mouse_genomes_project 11 81706245 81727334 + MGP_BALBcJ_P0031189 Slfn3 protein_coding protein_coding MGP_BALBcJ_T0100506.1 MGP_BALBcJ_G0038542.1 mouse_genomes_project 11 46140890 46140958 + Snord95 snoRNA snoRNA MGP_BALBcJ_T0033581.1 MGP_BALBcJ_G0019362.1 mouse_genomes_project 11 115449671 115466377 + MGP_BALBcJ_P0033581 Ten1 protein_coding protein_coding MGP_BALBcJ_T0033582.1 MGP_BALBcJ_G0019362.1 mouse_genomes_project 11 115449714 115457907 + Ten1 protein_coding retained_intron MGP_BALBcJ_T0033583.1 MGP_BALBcJ_G0019362.1 mouse_genomes_project 11 115449775 115466307 + Ten1 protein_coding processed_transcript MGP_BALBcJ_T0033584.1 MGP_BALBcJ_G0019362.1 mouse_genomes_project 11 115461996 115466307 + Ten1 protein_coding processed_transcript MGP_BALBcJ_T0012643.1 MGP_BALBcJ_G0010740.1 mouse_genomes_project 11 71598247 71598634 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003334.1 MGP_BALBcJ_G0003074.1 mouse_genomes_project 11 117360278 117363703 + Gm11738 antisense antisense MGP_BALBcJ_T0006187.1 MGP_BALBcJ_G0005168.1 mouse_genomes_project 11 30160346 30182903 - Gm12111 lincRNA lincRNA MGP_BALBcJ_T0006241.1 MGP_BALBcJ_G0005216.1 mouse_genomes_project 11 69612245 69618713 - Gm16013 lincRNA lincRNA MGP_BALBcJ_T0033786.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117377878 117495028 - MGP_BALBcJ_P0033786 Cyth1 protein_coding protein_coding MGP_BALBcJ_T0033787.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117410618 117458864 - MGP_BALBcJ_P0033787 Cyth1 protein_coding protein_coding MGP_BALBcJ_T0033788.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117410618 117495118 - MGP_BALBcJ_P0033788 Cyth1 protein_coding protein_coding MGP_BALBcJ_T0033789.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117410627 117495086 - MGP_BALBcJ_P0033789 Cyth1 protein_coding protein_coding MGP_BALBcJ_T0033790.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117431424 117473101 - Cyth1 protein_coding processed_transcript MGP_BALBcJ_T0033791.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117431879 117465147 - Cyth1 protein_coding processed_transcript MGP_BALBcJ_T0033792.1 MGP_BALBcJ_G0019405.1 mouse_genomes_project 11 117431898 117458864 - MGP_BALBcJ_P0033792 Cyth1 protein_coding protein_coding MGP_BALBcJ_T0009669.1 MGP_BALBcJ_G0007794.1 mouse_genomes_project 11 66282941 66283061 + Mir6406 miRNA miRNA MGP_BALBcJ_T0027811.1 MGP_BALBcJ_G0017936.1 mouse_genomes_project 11 1988170 1990398 + MGP_BALBcJ_P0027811 Rasl10a protein_coding protein_coding MGP_BALBcJ_T0027812.1 MGP_BALBcJ_G0017936.1 mouse_genomes_project 11 1988974 1990075 + Rasl10a protein_coding processed_transcript MGP_BALBcJ_T0012721.1 MGP_BALBcJ_G0010818.1 mouse_genomes_project 11 100451130 100451426 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017148.1 MGP_BALBcJ_G0015107.1 mouse_genomes_project 11 55603618 55608856 - 2010001A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017149.1 MGP_BALBcJ_G0015107.1 mouse_genomes_project 11 55603638 55608853 - 2010001A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017150.1 MGP_BALBcJ_G0015107.1 mouse_genomes_project 11 55603728 55608837 - 2010001A14Rik processed_transcript processed_transcript MGP_BALBcJ_T0029343.1 MGP_BALBcJ_G0018349.1 mouse_genomes_project 11 57875423 57889403 + MGP_BALBcJ_P0029343 Med9 protein_coding protein_coding MGP_BALBcJ_T0032170.1 MGP_BALBcJ_G0019024.1 mouse_genomes_project 11 97922383 97945937 - MGP_BALBcJ_P0032170 Tns4 protein_coding protein_coding MGP_BALBcJ_T0032171.1 MGP_BALBcJ_G0019024.1 mouse_genomes_project 11 97924872 97930552 - Tns4 protein_coding processed_transcript MGP_BALBcJ_T0032172.1 MGP_BALBcJ_G0019024.1 mouse_genomes_project 11 97927373 97932029 - Tns4 protein_coding retained_intron MGP_BALBcJ_T0032173.1 MGP_BALBcJ_G0019024.1 mouse_genomes_project 11 97942100 97945916 - Tns4 protein_coding retained_intron MGP_BALBcJ_T0006189.1 MGP_BALBcJ_G0005170.1 mouse_genomes_project 11 30465809 30484052 + Gm12116 lincRNA lincRNA MGP_BALBcJ_T0033291.1 MGP_BALBcJ_G0019305.1 mouse_genomes_project 11 114088628 114103533 + MGP_BALBcJ_P0033291 Cd300a protein_coding protein_coding MGP_BALBcJ_T0033292.1 MGP_BALBcJ_G0019305.1 mouse_genomes_project 11 114088628 114103533 + MGP_BALBcJ_P0033292 Cd300a protein_coding protein_coding MGP_BALBcJ_T0033293.1 MGP_BALBcJ_G0019305.1 mouse_genomes_project 11 114088881 114092055 + Cd300a protein_coding processed_transcript MGP_BALBcJ_T0028562.1 MGP_BALBcJ_G0018113.1 mouse_genomes_project 11 40773807 40778822 + MGP_BALBcJ_P0028562 Slu7 protein_coding protein_coding MGP_BALBcJ_T0028563.1 MGP_BALBcJ_G0018113.1 mouse_genomes_project 11 40773807 40785975 + MGP_BALBcJ_P0028563 Slu7 protein_coding protein_coding MGP_BALBcJ_T0028564.1 MGP_BALBcJ_G0018113.1 mouse_genomes_project 11 40773822 40788571 + MGP_BALBcJ_P0028564 Slu7 protein_coding protein_coding MGP_BALBcJ_T0028565.1 MGP_BALBcJ_G0018113.1 mouse_genomes_project 11 40777888 40788571 + MGP_BALBcJ_P0028565 Slu7 protein_coding protein_coding MGP_BALBcJ_T0028566.1 MGP_BALBcJ_G0018113.1 mouse_genomes_project 11 40777920 40779755 + Slu7 protein_coding processed_transcript MGP_BALBcJ_T0028567.1 MGP_BALBcJ_G0018113.1 mouse_genomes_project 11 40781996 40783222 + Slu7 protein_coding processed_transcript MGP_BALBcJ_T0028707.1 MGP_BALBcJ_G0018160.1 mouse_genomes_project 11 46626313 46647876 - MGP_BALBcJ_P0028707 Btnl9 protein_coding protein_coding MGP_BALBcJ_T0028708.1 MGP_BALBcJ_G0018160.1 mouse_genomes_project 11 46629784 46647762 - MGP_BALBcJ_P0028708 Btnl9 protein_coding protein_coding MGP_BALBcJ_T0028709.1 MGP_BALBcJ_G0018160.1 mouse_genomes_project 11 46630052 46631406 - Btnl9 protein_coding retained_intron MGP_BALBcJ_T0028710.1 MGP_BALBcJ_G0018160.1 mouse_genomes_project 11 46635554 46647754 - MGP_BALBcJ_P0028710 Btnl9 protein_coding protein_coding MGP_BALBcJ_T0028711.1 MGP_BALBcJ_G0018160.1 mouse_genomes_project 11 46643013 46647784 - Btnl9 protein_coding processed_transcript MGP_BALBcJ_T0029141.1 MGP_BALBcJ_G0018272.1 mouse_genomes_project 11 53280930 53322675 + MGP_BALBcJ_P0029141 G3bp1 protein_coding protein_coding MGP_BALBcJ_T0029142.1 MGP_BALBcJ_G0018272.1 mouse_genomes_project 11 53280963 53304705 + G3bp1 protein_coding processed_transcript MGP_BALBcJ_T0029143.1 MGP_BALBcJ_G0018272.1 mouse_genomes_project 11 53280978 53322683 + MGP_BALBcJ_P0029143 G3bp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0003265.1 MGP_BALBcJ_G0003017.1 mouse_genomes_project 11 97278072 97279082 + Gm12352 antisense antisense MGP_BALBcJ_T0003200.1 MGP_BALBcJ_G0002966.1 mouse_genomes_project 11 67447633 67449925 - Kcnab3os antisense antisense MGP_BALBcJ_T0100529.1 MGP_BALBcJ_G0038565.1 mouse_genomes_project 11 76549303 76549368 - Snord42a snoRNA snoRNA MGP_BALBcJ_T0031140.1 MGP_BALBcJ_G0018768.1 mouse_genomes_project 11 81165252 81210567 - MGP_BALBcJ_P0031140 Cct6b protein_coding protein_coding MGP_BALBcJ_T0031141.1 MGP_BALBcJ_G0018768.1 mouse_genomes_project 11 81165252 81210582 - MGP_BALBcJ_P0031141 Cct6b protein_coding protein_coding MGP_BALBcJ_T0009744.1 MGP_BALBcJ_G0007869.1 mouse_genomes_project 11 117247297 117247378 + Mir6933 miRNA miRNA MGP_BALBcJ_T0006314.1 MGP_BALBcJ_G0005266.1 mouse_genomes_project 11 101979076 101985966 - 2410004I01Rik lincRNA lincRNA MGP_BALBcJ_T0012649.1 MGP_BALBcJ_G0010746.1 mouse_genomes_project 11 73352297 73352931 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009686.1 MGP_BALBcJ_G0007811.1 mouse_genomes_project 11 73152286 73152354 - Mir6926 miRNA miRNA MGP_BALBcJ_T0012469.1 MGP_BALBcJ_G0010566.1 mouse_genomes_project 11 13649622 13650535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011284.1 MGP_BALBcJ_G0009409.1 mouse_genomes_project 11 82373484 82373792 + Gm23211 misc_RNA misc_RNA MGP_BALBcJ_T0029312.1 MGP_BALBcJ_G0018342.1 mouse_genomes_project 11 57494022 57495141 - MGP_BALBcJ_P0029312 Olfr222 protein_coding protein_coding MGP_BALBcJ_T0031941.1 MGP_BALBcJ_G0018969.1 mouse_genomes_project 11 96113700 96127396 + MGP_BALBcJ_P0031941 Mrpl45 protein_coding protein_coding MGP_BALBcJ_T0031942.1 MGP_BALBcJ_G0018969.1 mouse_genomes_project 11 96113892 96119497 + MGP_BALBcJ_P0031942 Mrpl45 protein_coding protein_coding MGP_BALBcJ_T0028742.1 MGP_BALBcJ_G0018168.1 mouse_genomes_project 11 47016255 47028640 + MGP_BALBcJ_P0028742 protein_coding protein_coding MGP_BALBcJ_T0009709.1 MGP_BALBcJ_G0007834.1 mouse_genomes_project 11 94726286 94726378 - Mir3063 miRNA miRNA MGP_BALBcJ_T0003180.1 MGP_BALBcJ_G0002950.1 mouse_genomes_project 11 60773846 60777227 - antisense antisense MGP_BALBcJ_T0009743.1 MGP_BALBcJ_G0007868.1 mouse_genomes_project 11 116305280 116305357 + Gm24323 miRNA miRNA MGP_BALBcJ_T0029424.1 MGP_BALBcJ_G0018365.1 mouse_genomes_project 11 58757965 58761509 + MGP_BALBcJ_P0029424 Smcr8 protein_coding protein_coding MGP_BALBcJ_T0029425.1 MGP_BALBcJ_G0018365.1 mouse_genomes_project 11 58757966 58768729 + MGP_BALBcJ_P0029425 Smcr8 protein_coding protein_coding MGP_BALBcJ_T0011783.1 MGP_BALBcJ_G0009904.1 mouse_genomes_project 11 72581099 72582070 + MGP_BALBcJ_P0011783 Olfr409-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0033959.1 MGP_BALBcJ_G0019436.1 mouse_genomes_project 11 119494866 119555597 + MGP_BALBcJ_P0033959 Bahcc1 protein_coding protein_coding MGP_BALBcJ_T0033960.1 MGP_BALBcJ_G0019436.1 mouse_genomes_project 11 119494866 119555583 + MGP_BALBcJ_P0033960 Bahcc1 protein_coding protein_coding MGP_BALBcJ_T0033961.1 MGP_BALBcJ_G0019436.1 mouse_genomes_project 11 119498364 119499204 + Bahcc1 protein_coding processed_transcript MGP_BALBcJ_T0033962.1 MGP_BALBcJ_G0019436.1 mouse_genomes_project 11 119498618 119555583 + MGP_BALBcJ_P0033962 Bahcc1 protein_coding protein_coding MGP_BALBcJ_T0033963.1 MGP_BALBcJ_G0019436.1 mouse_genomes_project 11 119552670 119555468 + Bahcc1 protein_coding processed_transcript MGP_BALBcJ_T0003333.1 MGP_BALBcJ_G0003073.1 mouse_genomes_project 11 117114977 117131462 + Gm11725 antisense antisense MGP_BALBcJ_T0006298.1 MGP_BALBcJ_G0005256.1 mouse_genomes_project 11 94946298 94947551 + Gm11535 lincRNA lincRNA MGP_BALBcJ_T0030169.1 MGP_BALBcJ_G0018528.1 mouse_genomes_project 11 68389835 68394457 - MGP_BALBcJ_P0030169 Gm21988 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030174.1 MGP_BALBcJ_G0018528.1 mouse_genomes_project 11 68389879 68394430 - MGP_BALBcJ_P0030174 Gm21988 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0017108.1 MGP_BALBcJ_G0015087.1 mouse_genomes_project 11 530754 539745 - Tug1 processed_transcript antisense MGP_BALBcJ_T0017109.1 MGP_BALBcJ_G0015087.1 mouse_genomes_project 11 530781 541031 - Tug1 processed_transcript antisense MGP_BALBcJ_T0017110.1 MGP_BALBcJ_G0015087.1 mouse_genomes_project 11 530781 539749 - Tug1 processed_transcript antisense MGP_BALBcJ_T0017111.1 MGP_BALBcJ_G0015087.1 mouse_genomes_project 11 538429 541261 - Tug1 processed_transcript antisense MGP_BALBcJ_T0017112.1 MGP_BALBcJ_G0015087.1 mouse_genomes_project 11 540280 541892 - Tug1 processed_transcript TEC MGP_BALBcJ_T0029901.1 MGP_BALBcJ_G0018467.1 mouse_genomes_project 11 67444066 67450845 + MGP_BALBcJ_P0029901 Kcnab3 protein_coding protein_coding MGP_BALBcJ_T0029902.1 MGP_BALBcJ_G0018467.1 mouse_genomes_project 11 67445674 67450845 + Kcnab3 protein_coding retained_intron MGP_BALBcJ_T0029903.1 MGP_BALBcJ_G0018467.1 mouse_genomes_project 11 67448132 67449946 + Kcnab3 protein_coding retained_intron MGP_BALBcJ_T0012621.1 MGP_BALBcJ_G0010718.1 mouse_genomes_project 11 63051636 63052126 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003254.1 MGP_BALBcJ_G0003008.1 mouse_genomes_project 11 95075355 95091194 - Hoxb5os antisense antisense MGP_BALBcJ_T0003255.1 MGP_BALBcJ_G0003008.1 mouse_genomes_project 11 95077844 95089365 - Hoxb5os antisense antisense MGP_BALBcJ_T0031185.1 MGP_BALBcJ_G0018779.1 mouse_genomes_project 11 81560191 81566468 + MGP_BALBcJ_P0031185 Slfn2 protein_coding protein_coding MGP_BALBcJ_T0030583.1 MGP_BALBcJ_G0018639.1 mouse_genomes_project 11 73114339 73129123 + MGP_BALBcJ_P0030583 Mnt protein_coding protein_coding MGP_BALBcJ_T0030584.1 MGP_BALBcJ_G0018639.1 mouse_genomes_project 11 73119734 73121132 + Mnt protein_coding retained_intron MGP_BALBcJ_T0030585.1 MGP_BALBcJ_G0018639.1 mouse_genomes_project 11 73120876 73127173 + MGP_BALBcJ_P0030585 Mnt protein_coding protein_coding MGP_BALBcJ_T0098459.1 MGP_BALBcJ_G0036513.1 mouse_genomes_project 11 57737606 57737743 + Gm24939 rRNA rRNA MGP_BALBcJ_T0029331.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57742254 57743147 - Cops3 protein_coding processed_transcript MGP_BALBcJ_T0029332.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57742254 57765134 - MGP_BALBcJ_P0029332 Cops3 protein_coding protein_coding MGP_BALBcJ_T0029333.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57745912 57761926 - MGP_BALBcJ_P0029333 Cops3 protein_coding protein_coding MGP_BALBcJ_T0029334.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57747838 57765134 - Cops3 protein_coding processed_transcript MGP_BALBcJ_T0029335.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57748866 57758284 - Cops3 protein_coding processed_transcript MGP_BALBcJ_T0029336.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57750762 57765134 - Cops3 protein_coding processed_transcript MGP_BALBcJ_T0029337.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57758081 57765048 - MGP_BALBcJ_P0029337 Cops3 protein_coding protein_coding MGP_BALBcJ_T0029338.1 MGP_BALBcJ_G0018347.1 mouse_genomes_project 11 57761628 57765108 - Cops3 protein_coding processed_transcript MGP_BALBcJ_T0031400.1 MGP_BALBcJ_G0018834.1 mouse_genomes_project 11 85255837 85318929 - MGP_BALBcJ_P0031400 Cltc protein_coding protein_coding MGP_BALBcJ_T0031401.1 MGP_BALBcJ_G0018834.1 mouse_genomes_project 11 85256141 85318865 - MGP_BALBcJ_P0031401 Cltc protein_coding protein_coding MGP_BALBcJ_T0031402.1 MGP_BALBcJ_G0018834.1 mouse_genomes_project 11 85256803 85265184 - MGP_BALBcJ_P0031402 Cltc protein_coding protein_coding MGP_BALBcJ_T0031403.1 MGP_BALBcJ_G0018834.1 mouse_genomes_project 11 85262424 85263917 - Cltc protein_coding processed_transcript MGP_BALBcJ_T0031404.1 MGP_BALBcJ_G0018834.1 mouse_genomes_project 11 85284704 85287910 - Cltc protein_coding retained_intron MGP_BALBcJ_T0031405.1 MGP_BALBcJ_G0018834.1 mouse_genomes_project 11 85285624 85287879 - Cltc protein_coding processed_transcript MGP_BALBcJ_T0030770.1 MGP_BALBcJ_G0018680.1 mouse_genomes_project 11 75222035 75236596 + MGP_BALBcJ_P0030770 Tmigd1 protein_coding protein_coding MGP_BALBcJ_T0030771.1 MGP_BALBcJ_G0018680.1 mouse_genomes_project 11 75224351 75230131 + MGP_BALBcJ_P0030771 Tmigd1 protein_coding protein_coding MGP_BALBcJ_T0030772.1 MGP_BALBcJ_G0018680.1 mouse_genomes_project 11 75224421 75236595 + MGP_BALBcJ_P0030772 Tmigd1 protein_coding protein_coding MGP_BALBcJ_T0030773.1 MGP_BALBcJ_G0018680.1 mouse_genomes_project 11 75224438 75236106 + Tmigd1 protein_coding processed_transcript MGP_BALBcJ_T0032061.1 MGP_BALBcJ_G0018998.1 mouse_genomes_project 11 97225287 97227019 + MGP_BALBcJ_P0032061 Pnmt protein_coding protein_coding MGP_BALBcJ_T0032062.1 MGP_BALBcJ_G0018998.1 mouse_genomes_project 11 97225549 97226320 + Pnmt protein_coding processed_transcript MGP_BALBcJ_T0029088.1 MGP_BALBcJ_G0018258.1 mouse_genomes_project 11 52522555 52597304 - MGP_BALBcJ_P0029088 Cdc42se2 protein_coding protein_coding MGP_BALBcJ_T0029089.1 MGP_BALBcJ_G0018258.1 mouse_genomes_project 11 52528673 52597275 - MGP_BALBcJ_P0029089 Cdc42se2 protein_coding protein_coding MGP_BALBcJ_T0029090.1 MGP_BALBcJ_G0018258.1 mouse_genomes_project 11 52545149 52597270 - Cdc42se2 protein_coding processed_transcript MGP_BALBcJ_T0029091.1 MGP_BALBcJ_G0018258.1 mouse_genomes_project 11 52545473 52597254 - Cdc42se2 protein_coding processed_transcript MGP_BALBcJ_T0029092.1 MGP_BALBcJ_G0018258.1 mouse_genomes_project 11 52545626 52566029 - Cdc42se2 protein_coding processed_transcript MGP_BALBcJ_T0012439.1 MGP_BALBcJ_G0010536.1 mouse_genomes_project 11 3120867 3121476 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012609.1 MGP_BALBcJ_G0010706.1 mouse_genomes_project 11 58797051 58798406 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028243.1 MGP_BALBcJ_G0018036.1 mouse_genomes_project 11 21159541 21256841 + MGP_BALBcJ_P0028243 Bcl11a protein_coding protein_coding MGP_BALBcJ_T0028244.1 MGP_BALBcJ_G0018036.1 mouse_genomes_project 11 21159602 21257770 + MGP_BALBcJ_P0028244 Bcl11a protein_coding protein_coding MGP_BALBcJ_T0028245.1 MGP_BALBcJ_G0018036.1 mouse_genomes_project 11 21159632 21172752 + Bcl11a protein_coding retained_intron MGP_BALBcJ_T0028246.1 MGP_BALBcJ_G0018036.1 mouse_genomes_project 11 21159658 21251610 + MGP_BALBcJ_P0028246 Bcl11a protein_coding protein_coding MGP_BALBcJ_T0028247.1 MGP_BALBcJ_G0018036.1 mouse_genomes_project 11 21162155 21257205 + MGP_BALBcJ_P0028247 Bcl11a protein_coding protein_coding MGP_BALBcJ_T0028248.1 MGP_BALBcJ_G0018036.1 mouse_genomes_project 11 21225491 21246471 + Bcl11a protein_coding processed_transcript MGP_BALBcJ_T0033755.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117058440 117069287 - MGP_BALBcJ_P0033755 Tk1 protein_coding protein_coding MGP_BALBcJ_T0033756.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117058538 117059849 - Tk1 protein_coding retained_intron MGP_BALBcJ_T0033757.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117058819 117060619 - Tk1 protein_coding retained_intron MGP_BALBcJ_T0033758.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117064834 117069032 - Tk1 protein_coding retained_intron MGP_BALBcJ_T0033759.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117064912 117069062 - Tk1 protein_coding retained_intron MGP_BALBcJ_T0033760.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117065652 117069042 - Tk1 protein_coding retained_intron MGP_BALBcJ_T0033761.1 MGP_BALBcJ_G0019397.1 mouse_genomes_project 11 117068028 117069012 - Tk1 protein_coding retained_intron MGP_BALBcJ_T0030435.1 MGP_BALBcJ_G0018583.1 mouse_genomes_project 11 70805329 70886427 + MGP_BALBcJ_P0030435 Ube2g1 protein_coding protein_coding MGP_BALBcJ_T0030436.1 MGP_BALBcJ_G0018583.1 mouse_genomes_project 11 70805329 70886427 + MGP_BALBcJ_P0030436 Ube2g1 protein_coding protein_coding MGP_BALBcJ_T0030437.1 MGP_BALBcJ_G0018583.1 mouse_genomes_project 11 70805365 70880086 + Ube2g1 protein_coding retained_intron MGP_BALBcJ_T0028086.1 MGP_BALBcJ_G0017997.1 mouse_genomes_project 11 14173890 14216322 + MGP_BALBcJ_P0028086 Ppp3r1 protein_coding protein_coding MGP_BALBcJ_T0028088.1 MGP_BALBcJ_G0017997.1 mouse_genomes_project 11 14208708 14210971 + Ppp3r1 protein_coding processed_transcript MGP_BALBcJ_T0029621.1 MGP_BALBcJ_G0018400.1 mouse_genomes_project 11 60718069 60749082 - MGP_BALBcJ_P0029621 Zfp287 protein_coding protein_coding MGP_BALBcJ_T0029622.1 MGP_BALBcJ_G0018400.1 mouse_genomes_project 11 60731265 60745863 - MGP_BALBcJ_P0029622 Zfp287 protein_coding protein_coding MGP_BALBcJ_T0029623.1 MGP_BALBcJ_G0018400.1 mouse_genomes_project 11 60738788 60745868 - MGP_BALBcJ_P0029623 Zfp287 protein_coding protein_coding MGP_BALBcJ_T0029624.1 MGP_BALBcJ_G0018400.1 mouse_genomes_project 11 60743918 60749102 - Zfp287 protein_coding retained_intron MGP_BALBcJ_T0099278.1 MGP_BALBcJ_G0037314.1 mouse_genomes_project 11 86004278 86004485 + Gm22068 snRNA snRNA MGP_BALBcJ_T0009626.1 MGP_BALBcJ_G0007751.1 mouse_genomes_project 11 1968268 1968372 + miRNA miRNA MGP_BALBcJ_T0003319.1 MGP_BALBcJ_G0003061.1 mouse_genomes_project 11 109048249 109050069 + Gm11697 antisense antisense MGP_BALBcJ_T0012559.1 MGP_BALBcJ_G0010656.1 mouse_genomes_project 11 44199833 44200178 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009670.1 MGP_BALBcJ_G0007795.1 mouse_genomes_project 11 67100942 67101047 - Mir3062 miRNA miRNA MGP_BALBcJ_T0028503.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33300123 34539459 - MGP_BALBcJ_P0028503 Tenm2 protein_coding protein_coding MGP_BALBcJ_T0028504.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33301125 34240886 - MGP_BALBcJ_P0028504 Tenm2 protein_coding protein_coding MGP_BALBcJ_T0028505.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33301498 34240886 - MGP_BALBcJ_P0028505 Tenm2 protein_coding protein_coding MGP_BALBcJ_T0028506.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33436488 34240886 - Tenm2 protein_coding processed_transcript MGP_BALBcJ_T0028507.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33437760 33972246 - Tenm2 protein_coding processed_transcript MGP_BALBcJ_T0028508.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33460647 33789455 - Tenm2 protein_coding processed_transcript MGP_BALBcJ_T0028509.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 33676597 33723840 - Tenm2 protein_coding processed_transcript MGP_BALBcJ_T0028510.1 MGP_BALBcJ_G0018101.1 mouse_genomes_project 11 34240924 34539541 - Tenm2 protein_coding processed_transcript MGP_BALBcJ_T0028589.1 MGP_BALBcJ_G0018122.1 mouse_genomes_project 11 41818508 41835452 - MGP_BALBcJ_P0028589 Ublcp1 protein_coding protein_coding MGP_BALBcJ_T0028590.1 MGP_BALBcJ_G0018122.1 mouse_genomes_project 11 41818510 41822784 - Ublcp1 protein_coding processed_transcript MGP_BALBcJ_T0028591.1 MGP_BALBcJ_G0018122.1 mouse_genomes_project 11 41818510 41825371 - Ublcp1 protein_coding processed_transcript MGP_BALBcJ_T0028592.1 MGP_BALBcJ_G0018122.1 mouse_genomes_project 11 41820093 41828971 - Ublcp1 protein_coding processed_transcript MGP_BALBcJ_T0028593.1 MGP_BALBcJ_G0018122.1 mouse_genomes_project 11 41820797 41825894 - Ublcp1 protein_coding processed_transcript MGP_BALBcJ_T0028594.1 MGP_BALBcJ_G0018122.1 mouse_genomes_project 11 41830573 41832027 - Ublcp1 protein_coding processed_transcript MGP_BALBcJ_T0003222.1 MGP_BALBcJ_G0002985.1 mouse_genomes_project 11 79820850 79838260 + 4930527B05Rik antisense antisense MGP_BALBcJ_T0012549.1 MGP_BALBcJ_G0010646.1 mouse_genomes_project 11 38921547 38922460 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100542.1 MGP_BALBcJ_G0038578.1 mouse_genomes_project 11 97856044 97856159 + Gm26394 snoRNA snoRNA MGP_BALBcJ_T0012664.1 MGP_BALBcJ_G0010761.1 mouse_genomes_project 11 77779658 77780614 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028353.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28007601 28118580 + MGP_BALBcJ_P0028353 Psme4 protein_coding protein_coding MGP_BALBcJ_T0028354.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28008197 28044352 + MGP_BALBcJ_P0028354 Psme4 protein_coding protein_coding MGP_BALBcJ_T0028355.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28051522 28053688 + Psme4 protein_coding processed_transcript MGP_BALBcJ_T0028356.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28070082 28074140 + Psme4 protein_coding processed_transcript MGP_BALBcJ_T0028357.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28072361 28073030 + Psme4 protein_coding processed_transcript MGP_BALBcJ_T0028358.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28092241 28096616 + MGP_BALBcJ_P0028358 Psme4 protein_coding protein_coding MGP_BALBcJ_T0028359.1 MGP_BALBcJ_G0018058.1 mouse_genomes_project 11 28105724 28112392 + Psme4 protein_coding processed_transcript MGP_BALBcJ_T0032207.1 MGP_BALBcJ_G0019047.1 mouse_genomes_project 11 98494839 98496022 - MGP_BALBcJ_P0032207 Krtap2-4 protein_coding protein_coding MGP_BALBcJ_T0031498.1 MGP_BALBcJ_G0018859.1 mouse_genomes_project 11 86583354 86591341 - MGP_BALBcJ_P0031498 Dynll2 protein_coding protein_coding MGP_BALBcJ_T0031499.1 MGP_BALBcJ_G0018859.1 mouse_genomes_project 11 86583354 86587835 - MGP_BALBcJ_P0031499 Dynll2 protein_coding protein_coding MGP_BALBcJ_T0031500.1 MGP_BALBcJ_G0018859.1 mouse_genomes_project 11 86583354 86590393 - MGP_BALBcJ_P0031500 Dynll2 protein_coding protein_coding MGP_BALBcJ_T0031501.1 MGP_BALBcJ_G0018859.1 mouse_genomes_project 11 86583986 86591164 - MGP_BALBcJ_P0031501 Dynll2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012484.1 MGP_BALBcJ_G0010581.1 mouse_genomes_project 11 17329595 17329916 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032956.1 MGP_BALBcJ_G0019231.1 mouse_genomes_project 11 105020116 105030849 + MGP_BALBcJ_P0032956 Ace3 protein_coding protein_coding MGP_BALBcJ_T0012426.1 MGP_BALBcJ_G0010523.1 mouse_genomes_project 11 79071 79442 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032103.1 MGP_BALBcJ_G0019011.1 mouse_genomes_project 11 97551804 97555095 + MGP_BALBcJ_P0032103 Csf3 protein_coding protein_coding MGP_BALBcJ_T0029686.1 MGP_BALBcJ_G0018418.1 mouse_genomes_project 11 63828052 63850086 + MGP_BALBcJ_P0029686 Zkscan6 protein_coding protein_coding MGP_BALBcJ_T0029687.1 MGP_BALBcJ_G0018418.1 mouse_genomes_project 11 63828121 63850087 + MGP_BALBcJ_P0029687 Zkscan6 protein_coding protein_coding MGP_BALBcJ_T0031428.1 MGP_BALBcJ_G0018844.1 mouse_genomes_project 11 85979741 86136317 + MGP_BALBcJ_P0031428 Tex14 protein_coding protein_coding MGP_BALBcJ_T0031429.1 MGP_BALBcJ_G0018844.1 mouse_genomes_project 11 86005196 86064658 + MGP_BALBcJ_P0031429 Tex14 protein_coding protein_coding MGP_BALBcJ_T0031430.1 MGP_BALBcJ_G0018844.1 mouse_genomes_project 11 86011164 86136014 + MGP_BALBcJ_P0031430 Tex14 protein_coding unknown_likely_coding MGP_BALBcJ_T0031431.1 MGP_BALBcJ_G0018844.1 mouse_genomes_project 11 86116447 86135451 + MGP_BALBcJ_P0031431 Tex14 protein_coding protein_coding MGP_BALBcJ_T0031432.1 MGP_BALBcJ_G0018844.1 mouse_genomes_project 11 86118727 86136313 + MGP_BALBcJ_P0031432 Tex14 protein_coding protein_coding MGP_BALBcJ_T0031433.1 MGP_BALBcJ_G0018844.1 mouse_genomes_project 11 86122881 86136160 + Tex14 protein_coding processed_transcript MGP_BALBcJ_T0028646.1 MGP_BALBcJ_G0018136.1 mouse_genomes_project 11 43791138 43817233 + MGP_BALBcJ_P0028646 Havcr2 protein_coding protein_coding MGP_BALBcJ_T0028647.1 MGP_BALBcJ_G0018136.1 mouse_genomes_project 11 43791172 43817224 + MGP_BALBcJ_P0028647 Havcr2 protein_coding protein_coding MGP_BALBcJ_T0030315.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69109603 69136196 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030316.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69109617 69136210 - MGP_BALBcJ_P0030316 Nup88 protein_coding protein_coding MGP_BALBcJ_T0030317.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69109622 69112913 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030318.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69109627 69136199 - MGP_BALBcJ_P0030318 Nup88 protein_coding protein_coding MGP_BALBcJ_T0030319.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69109647 69136191 - MGP_BALBcJ_P0030319 Nup88 protein_coding protein_coding MGP_BALBcJ_T0030320.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69109721 69136117 - MGP_BALBcJ_P0030320 Nup88 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030321.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69110422 69111644 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030322.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69110481 69111032 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030323.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69110523 69111281 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030324.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69110956 69111578 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030325.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69111226 69115365 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030326.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69116114 69136198 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030327.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69121054 69123056 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030328.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69121752 69123507 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0030329.1 MGP_BALBcJ_G0018558.1 mouse_genomes_project 11 69122793 69128356 - Nup88 protein_coding retained_intron MGP_BALBcJ_T0029186.1 MGP_BALBcJ_G0018288.1 mouse_genomes_project 11 56103205 56121706 + MGP_BALBcJ_P0029186 protein_coding protein_coding MGP_BALBcJ_T0017247.1 MGP_BALBcJ_G0015158.1 mouse_genomes_project 11 117725533 117728522 - Gm11748 processed_transcript processed_transcript MGP_BALBcJ_T0030073.1 MGP_BALBcJ_G0018510.1 mouse_genomes_project 11 68089618 68095248 + MGP_BALBcJ_P0030073 Ybx2 protein_coding protein_coding MGP_BALBcJ_T0030074.1 MGP_BALBcJ_G0018510.1 mouse_genomes_project 11 68089970 68095241 + MGP_BALBcJ_P0030074 Ybx2 protein_coding protein_coding MGP_BALBcJ_T0030075.1 MGP_BALBcJ_G0018510.1 mouse_genomes_project 11 68093490 68094306 + Ybx2 protein_coding retained_intron MGP_BALBcJ_T0030076.1 MGP_BALBcJ_G0018510.1 mouse_genomes_project 11 68094187 68095239 + Ybx2 protein_coding retained_intron MGP_BALBcJ_T0028170.1 MGP_BALBcJ_G0018020.1 mouse_genomes_project 11 19895060 20042574 - MGP_BALBcJ_P0028170 Gm28048 protein_coding protein_coding MGP_BALBcJ_T0028975.1 MGP_BALBcJ_G0018230.1 mouse_genomes_project 11 51180826 51181816 - MGP_BALBcJ_P0028975 Leap2 protein_coding protein_coding MGP_BALBcJ_T0012736.1 MGP_BALBcJ_G0010833.1 mouse_genomes_project 11 104183317 104185162 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012556.1 MGP_BALBcJ_G0010653.1 mouse_genomes_project 11 43144671 43145060 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030418.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70636747 70647161 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0030419.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70636747 70647161 + MGP_BALBcJ_P0030419 Mybbp1a protein_coding protein_coding MGP_BALBcJ_T0030420.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70636749 70646622 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0030421.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70636769 70638966 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0030422.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70639164 70639956 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0030423.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70643609 70646398 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0030424.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70645030 70646099 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0030425.1 MGP_BALBcJ_G0018580.1 mouse_genomes_project 11 70645966 70646495 + Mybbp1a protein_coding retained_intron MGP_BALBcJ_T0099250.1 MGP_BALBcJ_G0037286.1 mouse_genomes_project 11 52639787 52639957 + Gm23021 snRNA snRNA MGP_BALBcJ_T0032356.1 MGP_BALBcJ_G0019113.1 mouse_genomes_project 11 99719528 99760486 - MGP_BALBcJ_P0032356 Stat5b protein_coding protein_coding MGP_BALBcJ_T0032357.1 MGP_BALBcJ_G0019113.1 mouse_genomes_project 11 99719528 99788794 - MGP_BALBcJ_P0032357 Stat5b protein_coding protein_coding MGP_BALBcJ_T0032358.1 MGP_BALBcJ_G0019113.1 mouse_genomes_project 11 99736804 99788608 - Stat5b protein_coding processed_transcript MGP_BALBcJ_T0032500.1 MGP_BALBcJ_G0019143.1 mouse_genomes_project 11 100397211 100407756 + MGP_BALBcJ_P0032500 Rundc1 protein_coding protein_coding MGP_BALBcJ_T0028976.1 MGP_BALBcJ_G0018231.1 mouse_genomes_project 11 51186580 51189486 - MGP_BALBcJ_P0028976 Uqcrq protein_coding protein_coding MGP_BALBcJ_T0028977.1 MGP_BALBcJ_G0018231.1 mouse_genomes_project 11 51187611 51189490 - Uqcrq protein_coding processed_transcript MGP_BALBcJ_T0028978.1 MGP_BALBcJ_G0018231.1 mouse_genomes_project 11 51187611 51189486 - MGP_BALBcJ_P0028978 Uqcrq protein_coding protein_coding MGP_BALBcJ_T0028979.1 MGP_BALBcJ_G0018231.1 mouse_genomes_project 11 51187611 51189093 - MGP_BALBcJ_P0028979 Uqcrq protein_coding protein_coding MGP_BALBcJ_T0028481.1 MGP_BALBcJ_G0018094.1 mouse_genomes_project 11 31597154 31705938 + MGP_BALBcJ_P0028481 Fam196b protein_coding protein_coding MGP_BALBcJ_T0028482.1 MGP_BALBcJ_G0018094.1 mouse_genomes_project 11 31597154 31705937 + MGP_BALBcJ_P0028482 Fam196b protein_coding protein_coding MGP_BALBcJ_T0029527.1 MGP_BALBcJ_G0018383.1 mouse_genomes_project 11 59654456 59674712 + MGP_BALBcJ_P0029527 Grap protein_coding protein_coding MGP_BALBcJ_T0029528.1 MGP_BALBcJ_G0018383.1 mouse_genomes_project 11 59670498 59671333 + Grap protein_coding processed_transcript MGP_BALBcJ_T0003351.1 MGP_BALBcJ_G0003087.1 mouse_genomes_project 11 120319912 120343471 + Gm11775 antisense antisense MGP_BALBcJ_T0034080.1 MGP_BALBcJ_G0019462.1 mouse_genomes_project 11 119914993 119917121 - MGP_BALBcJ_P0034080 Myadml2 protein_coding protein_coding MGP_BALBcJ_T0034081.1 MGP_BALBcJ_G0019462.1 mouse_genomes_project 11 119914994 119916045 - Myadml2 protein_coding processed_transcript MGP_BALBcJ_T0030142.1 MGP_BALBcJ_G0018521.1 mouse_genomes_project 11 68248733 68261383 + MGP_BALBcJ_P0030142 Asgr2 protein_coding protein_coding MGP_BALBcJ_T0030143.1 MGP_BALBcJ_G0018521.1 mouse_genomes_project 11 68249055 68261853 + MGP_BALBcJ_P0030143 Asgr2 protein_coding protein_coding MGP_BALBcJ_T0030144.1 MGP_BALBcJ_G0018521.1 mouse_genomes_project 11 68253677 68261828 + Asgr2 protein_coding retained_intron MGP_BALBcJ_T0032710.1 MGP_BALBcJ_G0019178.1 mouse_genomes_project 11 101447989 101458691 - MGP_BALBcJ_P0032710 Fam171a2 protein_coding protein_coding MGP_BALBcJ_T0032711.1 MGP_BALBcJ_G0019178.1 mouse_genomes_project 11 101449756 101450794 - Fam171a2 protein_coding processed_transcript MGP_BALBcJ_T0032712.1 MGP_BALBcJ_G0019178.1 mouse_genomes_project 11 101451249 101458603 - Fam171a2 protein_coding processed_transcript MGP_BALBcJ_T0017100.1 MGP_BALBcJ_G0015084.1 mouse_genomes_project 11 338672 343378 + 8430429K09Rik processed_transcript processed_transcript MGP_BALBcJ_T0017101.1 MGP_BALBcJ_G0015084.1 mouse_genomes_project 11 338744 343242 + 8430429K09Rik processed_transcript processed_transcript MGP_BALBcJ_T0017102.1 MGP_BALBcJ_G0015084.1 mouse_genomes_project 11 338779 368946 + 8430429K09Rik processed_transcript processed_transcript MGP_BALBcJ_T0017103.1 MGP_BALBcJ_G0015084.1 mouse_genomes_project 11 338779 344617 + 8430429K09Rik processed_transcript processed_transcript MGP_BALBcJ_T0017104.1 MGP_BALBcJ_G0015084.1 mouse_genomes_project 11 338787 343295 + 8430429K09Rik processed_transcript processed_transcript MGP_BALBcJ_T0031524.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 86973460 87356759 - MGP_BALBcJ_P0031524 Msi2 protein_coding protein_coding MGP_BALBcJ_T0031525.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 86977960 87356706 - MGP_BALBcJ_P0031525 Msi2 protein_coding protein_coding MGP_BALBcJ_T0031526.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 86999891 87227497 - Msi2 protein_coding retained_intron MGP_BALBcJ_T0031527.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 87113767 87356715 - Msi2 protein_coding retained_intron MGP_BALBcJ_T0031528.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 87227404 87357129 - MGP_BALBcJ_P0031528 Msi2 protein_coding protein_coding MGP_BALBcJ_T0031529.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 87323240 87356759 - MGP_BALBcJ_P0031529 Msi2 protein_coding protein_coding MGP_BALBcJ_T0031530.1 MGP_BALBcJ_G0018865.1 mouse_genomes_project 11 87350035 87356759 - Msi2 protein_coding processed_transcript MGP_BALBcJ_T0003287.1 MGP_BALBcJ_G0003034.1 mouse_genomes_project 11 101382571 101384043 - Bloodlinc antisense antisense MGP_BALBcJ_T0031569.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89143751 89302363 - MGP_BALBcJ_P0031569 Stxbp4 protein_coding protein_coding MGP_BALBcJ_T0031570.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89160945 89216158 - MGP_BALBcJ_P0031570 Stxbp4 protein_coding protein_coding MGP_BALBcJ_T0031571.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89200616 89302341 - MGP_BALBcJ_P0031571 Stxbp4 protein_coding protein_coding MGP_BALBcJ_T0031572.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89259777 89302344 - MGP_BALBcJ_P0031572 Stxbp4 protein_coding protein_coding MGP_BALBcJ_T0031573.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89263470 89302355 - MGP_BALBcJ_P0031573 Stxbp4 protein_coding protein_coding MGP_BALBcJ_T0031574.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89279378 89295205 - MGP_BALBcJ_P0031574 Stxbp4 protein_coding protein_coding MGP_BALBcJ_T0031575.1 MGP_BALBcJ_G0018880.1 mouse_genomes_project 11 89294498 89302352 - Stxbp4 protein_coding processed_transcript MGP_BALBcJ_T0031782.1 MGP_BALBcJ_G0018929.1 mouse_genomes_project 11 94472786 94475911 + MGP_BALBcJ_P0031782 B130006D01Rik protein_coding protein_coding MGP_BALBcJ_T0006231.1 MGP_BALBcJ_G0005209.1 mouse_genomes_project 11 63302017 63312043 - Gm12295 lincRNA lincRNA MGP_BALBcJ_T0006232.1 MGP_BALBcJ_G0005209.1 mouse_genomes_project 11 63310149 63389801 - Gm12295 lincRNA lincRNA MGP_BALBcJ_T0031191.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81813559 81817895 - MGP_BALBcJ_P0031191 Pex12 protein_coding protein_coding MGP_BALBcJ_T0031192.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81813992 81817813 - MGP_BALBcJ_P0031192 Pex12 protein_coding protein_coding MGP_BALBcJ_T0031193.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81813992 81817860 - MGP_BALBcJ_P0031193 Pex12 protein_coding protein_coding MGP_BALBcJ_T0031194.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81813993 81817815 - MGP_BALBcJ_P0031194 Pex12 protein_coding protein_coding MGP_BALBcJ_T0031195.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81816821 81817856 - Pex12 protein_coding processed_transcript MGP_BALBcJ_T0031196.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81816947 81821504 - MGP_BALBcJ_P0031196 Pex12 protein_coding protein_coding MGP_BALBcJ_T0031197.1 MGP_BALBcJ_G0018784.1 mouse_genomes_project 11 81817246 81817876 - MGP_BALBcJ_P0031197 Pex12 protein_coding protein_coding MGP_BALBcJ_T0032391.1 MGP_BALBcJ_G0019118.1 mouse_genomes_project 11 100021761 100029433 + MGP_BALBcJ_P0032391 Naglu protein_coding protein_coding MGP_BALBcJ_T0032392.1 MGP_BALBcJ_G0019118.1 mouse_genomes_project 11 100023301 100028332 + Naglu protein_coding processed_transcript MGP_BALBcJ_T0032393.1 MGP_BALBcJ_G0019118.1 mouse_genomes_project 11 100023708 100028567 + Naglu protein_coding processed_transcript MGP_BALBcJ_T0034074.1 MGP_BALBcJ_G0019461.1 mouse_genomes_project 11 119903077 119912637 - MGP_BALBcJ_P0034074 Pycr1 protein_coding protein_coding MGP_BALBcJ_T0034075.1 MGP_BALBcJ_G0019461.1 mouse_genomes_project 11 119908372 119912715 - MGP_BALBcJ_P0034075 Pycr1 protein_coding protein_coding MGP_BALBcJ_T0034076.1 MGP_BALBcJ_G0019461.1 mouse_genomes_project 11 119910190 119912610 - MGP_BALBcJ_P0034076 Pycr1 protein_coding protein_coding MGP_BALBcJ_T0034077.1 MGP_BALBcJ_G0019461.1 mouse_genomes_project 11 119910444 119912671 - MGP_BALBcJ_P0034077 Pycr1 protein_coding protein_coding MGP_BALBcJ_T0034078.1 MGP_BALBcJ_G0019461.1 mouse_genomes_project 11 119910680 119912736 - MGP_BALBcJ_P0034078 Pycr1 protein_coding protein_coding MGP_BALBcJ_T0034079.1 MGP_BALBcJ_G0019461.1 mouse_genomes_project 11 119911711 119912671 - Pycr1 protein_coding retained_intron MGP_BALBcJ_T0033390.1 MGP_BALBcJ_G0019332.1 mouse_genomes_project 11 114704798 114719721 + MGP_BALBcJ_P0033390 Armc7 protein_coding protein_coding MGP_BALBcJ_T0033391.1 MGP_BALBcJ_G0019332.1 mouse_genomes_project 11 114704829 114713155 + Armc7 protein_coding processed_transcript MGP_BALBcJ_T0033392.1 MGP_BALBcJ_G0019332.1 mouse_genomes_project 11 114704873 114714686 + Armc7 protein_coding processed_transcript MGP_BALBcJ_T0033393.1 MGP_BALBcJ_G0019332.1 mouse_genomes_project 11 114705085 114718316 + Armc7 protein_coding processed_transcript MGP_BALBcJ_T0102139.1 MGP_BALBcJ_G0039956.1 mouse_genomes_project 11 56870193 56870604 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012760.1 MGP_BALBcJ_G0010857.1 mouse_genomes_project 11 115755205 115755508 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031028.1 MGP_BALBcJ_G0018735.1 mouse_genomes_project 11 77703365 77704104 - MGP_BALBcJ_P0031028 Gm9964 protein_coding protein_coding MGP_BALBcJ_T0030531.1 MGP_BALBcJ_G0018618.1 mouse_genomes_project 11 72106490 72107429 - MGP_BALBcJ_P0030531 Olfr395 protein_coding protein_coding MGP_BALBcJ_T0031799.1 MGP_BALBcJ_G0018933.1 mouse_genomes_project 11 94617606 94671841 - MGP_BALBcJ_P0031799 B4galnt2 protein_coding protein_coding MGP_BALBcJ_T0100484.1 MGP_BALBcJ_G0038520.1 mouse_genomes_project 11 3606712 3606843 - Gm24313 snoRNA snoRNA MGP_BALBcJ_T0012446.1 MGP_BALBcJ_G0010543.1 mouse_genomes_project 11 3674429 3675415 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029345.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57898184 57976390 - MGP_BALBcJ_P0029345 Pemt protein_coding protein_coding MGP_BALBcJ_T0029346.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57898188 57899085 - Pemt protein_coding processed_transcript MGP_BALBcJ_T0029347.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57898401 57965322 - Pemt protein_coding processed_transcript MGP_BALBcJ_T0029348.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57898418 57969735 - MGP_BALBcJ_P0029348 Pemt protein_coding protein_coding MGP_BALBcJ_T0029349.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57901728 57976444 - MGP_BALBcJ_P0029349 Pemt protein_coding protein_coding MGP_BALBcJ_T0029350.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57904433 57947837 - Pemt protein_coding processed_transcript MGP_BALBcJ_T0029351.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57904453 57911322 - Pemt protein_coding processed_transcript MGP_BALBcJ_T0029352.1 MGP_BALBcJ_G0018351.1 mouse_genomes_project 11 57974499 57976440 - Pemt protein_coding processed_transcript MGP_BALBcJ_T0030820.1 MGP_BALBcJ_G0018689.1 mouse_genomes_project 11 75839016 75844287 - MGP_BALBcJ_P0030820 Trp53i13 protein_coding protein_coding MGP_BALBcJ_T0030821.1 MGP_BALBcJ_G0018689.1 mouse_genomes_project 11 75839528 75843680 - Trp53i13 protein_coding processed_transcript MGP_BALBcJ_T0030822.1 MGP_BALBcJ_G0018689.1 mouse_genomes_project 11 75839887 75843952 - Trp53i13 protein_coding processed_transcript MGP_BALBcJ_T0030823.1 MGP_BALBcJ_G0018689.1 mouse_genomes_project 11 75840018 75847421 - MGP_BALBcJ_P0030823 Trp53i13 protein_coding protein_coding MGP_BALBcJ_T0030824.1 MGP_BALBcJ_G0018689.1 mouse_genomes_project 11 75843660 75847670 - Trp53i13 protein_coding processed_transcript MGP_BALBcJ_T0009725.1 MGP_BALBcJ_G0007850.1 mouse_genomes_project 11 100309118 100309214 - Gm25593 miRNA miRNA MGP_BALBcJ_T0027638.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 229924 256799 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027639.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 229924 294672 - MGP_BALBcJ_P0027639 Limk2 protein_coding protein_coding MGP_BALBcJ_T0027640.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 229924 256799 - MGP_BALBcJ_P0027640 Limk2 protein_coding protein_coding MGP_BALBcJ_T0027641.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 231408 256444 - MGP_BALBcJ_P0027641 Limk2 protein_coding protein_coding MGP_BALBcJ_T0027642.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 235908 238265 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027643.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 238217 241316 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027644.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 238855 241651 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027645.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 241315 294672 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027646.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 241632 242157 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027647.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 243676 254585 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027648.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 245959 256758 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0027649.1 MGP_BALBcJ_G0017897.1 mouse_genomes_project 11 282448 294687 - Limk2 protein_coding processed_transcript MGP_BALBcJ_T0031774.1 MGP_BALBcJ_G0018926.1 mouse_genomes_project 11 94312014 94330875 - MGP_BALBcJ_P0031774 Ngfr protein_coding protein_coding MGP_BALBcJ_T0033815.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117725892 117738071 + MGP_BALBcJ_P0033815 Engase protein_coding protein_coding MGP_BALBcJ_T0033816.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117726004 117728240 + MGP_BALBcJ_P0033816 Engase protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033817.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117726009 117731926 + MGP_BALBcJ_P0033817 Engase protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033818.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117726023 117737949 + MGP_BALBcJ_P0033818 Engase protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033819.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117726035 117736635 + MGP_BALBcJ_P0033819 Engase protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033820.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117726046 117738071 + MGP_BALBcJ_P0033820 Engase protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033821.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117729983 117731808 + Engase protein_coding retained_intron MGP_BALBcJ_T0033822.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117731250 117736635 + Engase protein_coding retained_intron MGP_BALBcJ_T0033823.1 MGP_BALBcJ_G0019412.1 mouse_genomes_project 11 117733351 117736371 + MGP_BALBcJ_P0033823 Engase protein_coding protein_coding MGP_BALBcJ_T0011281.1 MGP_BALBcJ_G0009406.1 mouse_genomes_project 11 65406829 65407142 + Gm26476 misc_RNA misc_RNA MGP_BALBcJ_T0031688.1 MGP_BALBcJ_G0018902.1 mouse_genomes_project 11 93239962 93287661 - MGP_BALBcJ_P0031688 Acsf2 protein_coding protein_coding MGP_BALBcJ_T0031689.1 MGP_BALBcJ_G0018902.1 mouse_genomes_project 11 93242750 93249088 - Acsf2 protein_coding processed_transcript MGP_BALBcJ_T0031691.1 MGP_BALBcJ_G0018902.1 mouse_genomes_project 11 93254496 93256761 - Acsf2 protein_coding processed_transcript MGP_BALBcJ_T0031692.1 MGP_BALBcJ_G0018902.1 mouse_genomes_project 11 93255472 93287559 - Acsf2 protein_coding processed_transcript MGP_BALBcJ_T0003202.1 MGP_BALBcJ_G0002968.1 mouse_genomes_project 11 67570397 67575527 + Dnah2os antisense antisense MGP_BALBcJ_T0012564.1 MGP_BALBcJ_G0010661.1 mouse_genomes_project 11 46544108 46544418 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031071.1 MGP_BALBcJ_G0018747.1 mouse_genomes_project 11 78565047 78590013 + MGP_BALBcJ_P0031071 Adap2 protein_coding protein_coding MGP_BALBcJ_T0031072.1 MGP_BALBcJ_G0018747.1 mouse_genomes_project 11 78565058 78576931 + MGP_BALBcJ_P0031072 Adap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029198.1 MGP_BALBcJ_G0018291.1 mouse_genomes_project 11 56158043 56174754 + MGP_BALBcJ_P0029198 Sh3bp5l protein_coding protein_coding MGP_BALBcJ_T0029199.1 MGP_BALBcJ_G0018291.1 mouse_genomes_project 11 56158069 56174751 + MGP_BALBcJ_P0029199 Sh3bp5l protein_coding protein_coding MGP_BALBcJ_T0029200.1 MGP_BALBcJ_G0018291.1 mouse_genomes_project 11 56158362 56158829 + Sh3bp5l protein_coding processed_transcript MGP_BALBcJ_T0029201.1 MGP_BALBcJ_G0018291.1 mouse_genomes_project 11 56158594 56174746 + Sh3bp5l protein_coding processed_transcript MGP_BALBcJ_T0029202.1 MGP_BALBcJ_G0018291.1 mouse_genomes_project 11 56172336 56173976 + Sh3bp5l protein_coding processed_transcript MGP_BALBcJ_T0030719.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74430036 74571636 - Glod4 protein_coding retained_intron MGP_BALBcJ_T0030731.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74532686 74571624 - MGP_BALBcJ_P0030731 Glod4 protein_coding protein_coding MGP_BALBcJ_T0030734.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74548825 74571686 - MGP_BALBcJ_P0030734 Glod4 protein_coding protein_coding MGP_BALBcJ_T0030735.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74548922 74571612 - MGP_BALBcJ_P0030735 Glod4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030736.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74549109 74571420 - MGP_BALBcJ_P0030736 Glod4 protein_coding protein_coding MGP_BALBcJ_T0030737.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74560766 74571571 - MGP_BALBcJ_P0030737 Glod4 protein_coding protein_coding MGP_BALBcJ_T0030738.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74561783 74567537 - Glod4 protein_coding retained_intron MGP_BALBcJ_T0030739.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74562055 74571630 - MGP_BALBcJ_P0030739 Glod4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030740.1 MGP_BALBcJ_G0018668.1 mouse_genomes_project 11 74565240 74571599 - MGP_BALBcJ_P0030740 Glod4 protein_coding protein_coding MGP_BALBcJ_T0009654.1 MGP_BALBcJ_G0007779.1 mouse_genomes_project 11 49767519 49767610 + Mir3061 miRNA miRNA MGP_BALBcJ_T0012655.1 MGP_BALBcJ_G0010752.1 mouse_genomes_project 11 75874350 75875632 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030432.1 MGP_BALBcJ_G0018582.1 mouse_genomes_project 11 70691413 70698938 - Spns3 protein_coding processed_transcript MGP_BALBcJ_T0030433.1 MGP_BALBcJ_G0018582.1 mouse_genomes_project 11 70694649 70746695 - MGP_BALBcJ_P0030433 Spns3 protein_coding protein_coding MGP_BALBcJ_T0030434.1 MGP_BALBcJ_G0018582.1 mouse_genomes_project 11 70694654 70746490 - MGP_BALBcJ_P0030434 Spns3 protein_coding protein_coding MGP_BALBcJ_T0030530.1 MGP_BALBcJ_G0018617.1 mouse_genomes_project 11 72087446 72088379 - MGP_BALBcJ_P0030530 Olfr394 protein_coding protein_coding MGP_BALBcJ_T0031136.1 MGP_BALBcJ_G0018767.1 mouse_genomes_project 11 80830994 80888366 + MGP_BALBcJ_P0031136 Tmem132e protein_coding protein_coding MGP_BALBcJ_T0031137.1 MGP_BALBcJ_G0018767.1 mouse_genomes_project 11 80830994 80888371 + MGP_BALBcJ_P0031137 Tmem132e protein_coding protein_coding MGP_BALBcJ_T0031138.1 MGP_BALBcJ_G0018767.1 mouse_genomes_project 11 80831217 80876762 + Tmem132e protein_coding processed_transcript MGP_BALBcJ_T0031139.1 MGP_BALBcJ_G0018767.1 mouse_genomes_project 11 80880295 80884938 + Tmem132e protein_coding retained_intron MGP_BALBcJ_T0033733.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117008399 117022034 - MGP_BALBcJ_P0033733 Tmc6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033734.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117008399 117023025 - MGP_BALBcJ_P0033734 Tmc6 protein_coding protein_coding MGP_BALBcJ_T0033735.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117008471 117011485 - Tmc6 protein_coding retained_intron MGP_BALBcJ_T0033736.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117012485 117015443 - MGP_BALBcJ_P0033736 Tmc6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033737.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117017756 117023007 - MGP_BALBcJ_P0033737 Tmc6 protein_coding protein_coding MGP_BALBcJ_T0033738.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117018116 117022036 - MGP_BALBcJ_P0033738 Tmc6 protein_coding protein_coding MGP_BALBcJ_T0033739.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117021127 117023330 - MGP_BALBcJ_P0033739 Tmc6 protein_coding protein_coding MGP_BALBcJ_T0033740.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117021323 117024584 - MGP_BALBcJ_P0033740 Tmc6 protein_coding protein_coding MGP_BALBcJ_T0033741.1 MGP_BALBcJ_G0019392.1 mouse_genomes_project 11 117021577 117023044 - MGP_BALBcJ_P0033741 Tmc6 protein_coding protein_coding MGP_BALBcJ_T0011274.1 MGP_BALBcJ_G0009399.1 mouse_genomes_project 11 18240904 18241172 - Gm22600 misc_RNA misc_RNA MGP_BALBcJ_T0030987.1 MGP_BALBcJ_G0018724.1 mouse_genomes_project 11 76881252 76886326 - MGP_BALBcJ_P0030987 Tmem199 protein_coding protein_coding MGP_BALBcJ_T0030988.1 MGP_BALBcJ_G0018724.1 mouse_genomes_project 11 76881449 76883016 - Tmem199 protein_coding retained_intron MGP_BALBcJ_T0030989.1 MGP_BALBcJ_G0018724.1 mouse_genomes_project 11 76882705 76886199 - Tmem199 protein_coding retained_intron MGP_BALBcJ_T0030990.1 MGP_BALBcJ_G0018724.1 mouse_genomes_project 11 76883667 76886237 - Tmem199 protein_coding retained_intron MGP_BALBcJ_T0003237.1 MGP_BALBcJ_G0002995.1 mouse_genomes_project 11 86616016 86670666 - Gm11508 antisense antisense MGP_BALBcJ_T0028295.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26575893 26708271 + MGP_BALBcJ_P0028295 Ccdc88a protein_coding protein_coding MGP_BALBcJ_T0028296.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26576012 26625191 + MGP_BALBcJ_P0028296 Ccdc88a protein_coding protein_coding MGP_BALBcJ_T0028297.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26653708 26658444 + Ccdc88a protein_coding processed_transcript MGP_BALBcJ_T0028298.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26661103 26680118 + MGP_BALBcJ_P0028298 Ccdc88a protein_coding protein_coding MGP_BALBcJ_T0028299.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26667569 26701555 + MGP_BALBcJ_P0028299 Ccdc88a protein_coding protein_coding MGP_BALBcJ_T0028300.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26683396 26700967 + MGP_BALBcJ_P0028300 Ccdc88a protein_coding protein_coding MGP_BALBcJ_T0028301.1 MGP_BALBcJ_G0018046.1 mouse_genomes_project 11 26691369 26695300 + Ccdc88a protein_coding processed_transcript MGP_BALBcJ_T0031586.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91750482 91752335 + Car10 protein_coding processed_transcript MGP_BALBcJ_T0031587.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91750858 92155085 + MGP_BALBcJ_P0031587 Car10 protein_coding protein_coding MGP_BALBcJ_T0031588.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91750858 92030767 + MGP_BALBcJ_P0031588 Car10 protein_coding protein_coding MGP_BALBcJ_T0031589.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91750858 92265398 + MGP_BALBcJ_P0031589 Car10 protein_coding protein_coding MGP_BALBcJ_T0031590.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91750868 92264927 + MGP_BALBcJ_P0031590 Car10 protein_coding protein_coding MGP_BALBcJ_T0031591.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91751758 91843332 + MGP_BALBcJ_P0031591 Car10 protein_coding protein_coding MGP_BALBcJ_T0031592.1 MGP_BALBcJ_G0018884.1 mouse_genomes_project 11 91751758 92265402 + MGP_BALBcJ_P0031592 Car10 protein_coding protein_coding MGP_BALBcJ_T0003106.1 MGP_BALBcJ_G0002887.1 mouse_genomes_project 11 9316370 9338913 + Gm12002 antisense antisense MGP_BALBcJ_T0003107.1 MGP_BALBcJ_G0002887.1 mouse_genomes_project 11 9316389 9337611 + Gm12002 antisense antisense MGP_BALBcJ_T0003108.1 MGP_BALBcJ_G0002887.1 mouse_genomes_project 11 9324072 9353426 + Gm12002 antisense antisense MGP_BALBcJ_T0006195.1 MGP_BALBcJ_G0005176.1 mouse_genomes_project 11 37840661 37841621 - 3110004A20Rik lincRNA lincRNA MGP_BALBcJ_T0031323.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83538148 83694831 - MGP_BALBcJ_P0031323 protein_coding protein_coding MGP_BALBcJ_T0031324.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83539353 83582915 - MGP_BALBcJ_P0031324 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031325.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83539976 83542169 - MGP_BALBcJ_P0031325 protein_coding protein_coding MGP_BALBcJ_T0031326.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83580940 83594986 - MGP_BALBcJ_P0031326 protein_coding protein_coding MGP_BALBcJ_T0031327.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83591041 83597574 - MGP_BALBcJ_P0031327 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031328.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83602867 83606939 - protein_coding retained_intron MGP_BALBcJ_T0031329.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83629290 83694954 - protein_coding processed_transcript MGP_BALBcJ_T0031330.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83648924 83694761 - protein_coding processed_transcript MGP_BALBcJ_T0031331.1 MGP_BALBcJ_G0018818.1 mouse_genomes_project 11 83652386 83694722 - protein_coding retained_intron MGP_BALBcJ_T0009639.1 MGP_BALBcJ_G0007764.1 mouse_genomes_project 11 25938796 25938904 + Mir217 miRNA miRNA MGP_BALBcJ_T0034058.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119885754 119892353 - Sirt7 protein_coding retained_intron MGP_BALBcJ_T0034059.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119885754 119892624 - Sirt7 protein_coding retained_intron MGP_BALBcJ_T0034060.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119885754 119892398 - MGP_BALBcJ_P0034060 Sirt7 protein_coding protein_coding MGP_BALBcJ_T0034061.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119885756 119892383 - Sirt7 protein_coding retained_intron MGP_BALBcJ_T0034062.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119885770 119892404 - Sirt7 protein_coding retained_intron MGP_BALBcJ_T0034063.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119885802 119888361 - MGP_BALBcJ_P0034063 Sirt7 protein_coding protein_coding MGP_BALBcJ_T0034064.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119886151 119886752 - Sirt7 protein_coding processed_transcript MGP_BALBcJ_T0034065.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119888382 119892374 - Sirt7 protein_coding processed_transcript MGP_BALBcJ_T0034066.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119889373 119890186 - Sirt7 protein_coding retained_intron MGP_BALBcJ_T0034067.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119890663 119892376 - Sirt7 protein_coding retained_intron MGP_BALBcJ_T0034068.1 MGP_BALBcJ_G0019459.1 mouse_genomes_project 11 119891373 119892368 - MGP_BALBcJ_P0034068 Sirt7 protein_coding protein_coding MGP_BALBcJ_T0032785.1 MGP_BALBcJ_G0019195.1 mouse_genomes_project 11 102049412 102065197 + Nmt1 protein_coding processed_transcript MGP_BALBcJ_T0032786.1 MGP_BALBcJ_G0019195.1 mouse_genomes_project 11 102049568 102091751 + MGP_BALBcJ_P0032786 Nmt1 protein_coding protein_coding MGP_BALBcJ_T0032787.1 MGP_BALBcJ_G0019195.1 mouse_genomes_project 11 102049807 102078911 + Nmt1 protein_coding processed_transcript MGP_BALBcJ_T0000839.1 MGP_BALBcJ_G0000771.1 mouse_genomes_project 11 28929559 28929933 + TEC TEC MGP_BALBcJ_T0012669.1 MGP_BALBcJ_G0010766.1 mouse_genomes_project 11 79483405 79485383 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006151.1 MGP_BALBcJ_G0005139.1 mouse_genomes_project 11 15762249 15766421 - Gm28401 lincRNA lincRNA MGP_BALBcJ_T0006152.1 MGP_BALBcJ_G0005139.1 mouse_genomes_project 11 15762344 15766440 - Gm28401 lincRNA lincRNA MGP_BALBcJ_T0030545.1 MGP_BALBcJ_G0018625.1 mouse_genomes_project 11 72342896 72343844 + MGP_BALBcJ_P0030545 Olfr401 protein_coding protein_coding MGP_BALBcJ_T0099275.1 MGP_BALBcJ_G0037311.1 mouse_genomes_project 11 84996871 84996977 - Gm26439 snRNA snRNA MGP_BALBcJ_T0012511.1 MGP_BALBcJ_G0010608.1 mouse_genomes_project 11 24511421 24511819 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006276.1 MGP_BALBcJ_G0005240.1 mouse_genomes_project 11 86342267 86343966 + Mir142hg lincRNA lincRNA MGP_BALBcJ_T0033500.1 MGP_BALBcJ_G0019348.1 mouse_genomes_project 11 115143293 115149613 + MGP_BALBcJ_P0033500 Smim5 protein_coding protein_coding MGP_BALBcJ_T0033501.1 MGP_BALBcJ_G0019348.1 mouse_genomes_project 11 115143506 115149241 + MGP_BALBcJ_P0033501 Smim5 protein_coding protein_coding MGP_BALBcJ_T0033502.1 MGP_BALBcJ_G0019348.1 mouse_genomes_project 11 115143530 115149054 + MGP_BALBcJ_P0033502 Smim5 protein_coding protein_coding MGP_BALBcJ_T0031979.1 MGP_BALBcJ_G0018980.1 mouse_genomes_project 11 96569729 96575416 - Cwc25 protein_coding processed_transcript MGP_BALBcJ_T0031980.1 MGP_BALBcJ_G0018980.1 mouse_genomes_project 11 96569863 96589843 - MGP_BALBcJ_P0031980 Cwc25 protein_coding protein_coding MGP_BALBcJ_T0031981.1 MGP_BALBcJ_G0018980.1 mouse_genomes_project 11 96571914 96576838 - MGP_BALBcJ_P0031981 Cwc25 protein_coding protein_coding MGP_BALBcJ_T0031982.1 MGP_BALBcJ_G0018980.1 mouse_genomes_project 11 96579853 96589827 - MGP_BALBcJ_P0031982 Cwc25 protein_coding protein_coding MGP_BALBcJ_T0031113.1 MGP_BALBcJ_G0018754.1 mouse_genomes_project 11 78905581 78909763 + MGP_BALBcJ_P0031113 Cdk5r1 protein_coding protein_coding MGP_BALBcJ_T0031114.1 MGP_BALBcJ_G0018754.1 mouse_genomes_project 11 78905614 78906482 + MGP_BALBcJ_P0031114 Cdk5r1 protein_coding protein_coding MGP_BALBcJ_T0006332.1 MGP_BALBcJ_G0005280.1 mouse_genomes_project 11 113399503 113418671 - Gm11690 lincRNA lincRNA MGP_BALBcJ_T0099238.1 MGP_BALBcJ_G0037274.1 mouse_genomes_project 11 21636924 21636997 - Gm22787 snRNA snRNA MGP_BALBcJ_T0029184.1 MGP_BALBcJ_G0018287.1 mouse_genomes_project 11 56026747 56050647 + MGP_BALBcJ_P0029184 Irgm2 protein_coding protein_coding MGP_BALBcJ_T0029185.1 MGP_BALBcJ_G0018287.1 mouse_genomes_project 11 56042252 56050655 + MGP_BALBcJ_P0029185 Irgm2 protein_coding protein_coding MGP_BALBcJ_T0031098.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854386 78860543 + Psmd11 protein_coding retained_intron MGP_BALBcJ_T0031099.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854394 78899975 + MGP_BALBcJ_P0031099 Psmd11 protein_coding protein_coding MGP_BALBcJ_T0031100.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854396 78902044 + MGP_BALBcJ_P0031100 Psmd11 protein_coding protein_coding MGP_BALBcJ_T0031101.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854415 78900372 + Psmd11 protein_coding retained_intron MGP_BALBcJ_T0031102.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854417 78871719 + MGP_BALBcJ_P0031102 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031103.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854436 78888776 + MGP_BALBcJ_P0031103 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031104.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854457 78882659 + MGP_BALBcJ_P0031104 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031105.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854457 78897609 + MGP_BALBcJ_P0031105 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031106.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854457 78899605 + MGP_BALBcJ_P0031106 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031107.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78854461 78882840 + MGP_BALBcJ_P0031107 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031108.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78855655 78882844 + MGP_BALBcJ_P0031108 Psmd11 protein_coding protein_coding MGP_BALBcJ_T0031109.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78882784 78899941 + MGP_BALBcJ_P0031109 Psmd11 protein_coding protein_coding MGP_BALBcJ_T0031110.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78888793 78899780 + MGP_BALBcJ_P0031110 Psmd11 protein_coding protein_coding MGP_BALBcJ_T0031111.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78890681 78902044 + MGP_BALBcJ_P0031111 Psmd11 protein_coding protein_coding MGP_BALBcJ_T0031112.1 MGP_BALBcJ_G0018753.1 mouse_genomes_project 11 78890685 78899707 + MGP_BALBcJ_P0031112 Psmd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100479.1 MGP_BALBcJ_G0038515.1 mouse_genomes_project 11 681358 681457 + Gm24013 snoRNA snoRNA MGP_BALBcJ_T0100496.1 MGP_BALBcJ_G0038532.1 mouse_genomes_project 11 22753739 22753869 + Gm23514 snoRNA snoRNA MGP_BALBcJ_T0012739.1 MGP_BALBcJ_G0010836.1 mouse_genomes_project 11 106049590 106050422 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000835.1 MGP_BALBcJ_G0000767.1 mouse_genomes_project 11 15880445 15883614 - TEC TEC MGP_BALBcJ_T0028691.1 MGP_BALBcJ_G0018153.1 mouse_genomes_project 11 46432439 46440260 - MGP_BALBcJ_P0028691 protein_coding protein_coding MGP_BALBcJ_T0028693.1 MGP_BALBcJ_G0018153.1 mouse_genomes_project 11 46434593 46443641 - MGP_BALBcJ_P0028693 protein_coding protein_coding MGP_BALBcJ_T0028694.1 MGP_BALBcJ_G0018153.1 mouse_genomes_project 11 46434964 46440892 - protein_coding processed_transcript MGP_BALBcJ_T0027653.1 MGP_BALBcJ_G0017899.1 mouse_genomes_project 11 377679 383564 + MGP_BALBcJ_P0027653 Pla2g3 protein_coding protein_coding MGP_BALBcJ_T0027654.1 MGP_BALBcJ_G0017899.1 mouse_genomes_project 11 377694 388736 + MGP_BALBcJ_P0027654 Pla2g3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027655.1 MGP_BALBcJ_G0017899.1 mouse_genomes_project 11 378385 383561 + Pla2g3 protein_coding retained_intron MGP_BALBcJ_T0003177.1 MGP_BALBcJ_G0002948.1 mouse_genomes_project 11 60621186 60623167 + Lrrc75aos2 antisense antisense MGP_BALBcJ_T0003178.1 MGP_BALBcJ_G0002948.1 mouse_genomes_project 11 60621187 60622442 + Lrrc75aos2 antisense antisense MGP_BALBcJ_T0012477.1 MGP_BALBcJ_G0010574.1 mouse_genomes_project 11 15590250 15591496 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000333.1 MGP_BALBcJ_G0000274.1 mouse_genomes_project 11 41749715 41749768 - mt-Tk Mt_tRNA Mt_tRNA MGP_BALBcJ_T0030426.1 MGP_BALBcJ_G0018581.1 mouse_genomes_project 11 70647030 70685291 - MGP_BALBcJ_P0030426 Spns2 protein_coding protein_coding MGP_BALBcJ_T0030427.1 MGP_BALBcJ_G0018581.1 mouse_genomes_project 11 70647034 70649934 - Spns2 protein_coding retained_intron MGP_BALBcJ_T0030428.1 MGP_BALBcJ_G0018581.1 mouse_genomes_project 11 70648000 70651743 - Spns2 protein_coding processed_transcript MGP_BALBcJ_T0030429.1 MGP_BALBcJ_G0018581.1 mouse_genomes_project 11 70648124 70652014 - MGP_BALBcJ_P0030429 Spns2 protein_coding protein_coding MGP_BALBcJ_T0030430.1 MGP_BALBcJ_G0018581.1 mouse_genomes_project 11 70648233 70649511 - Spns2 protein_coding processed_transcript MGP_BALBcJ_T0030431.1 MGP_BALBcJ_G0018581.1 mouse_genomes_project 11 70654421 70670420 - Spns2 protein_coding processed_transcript MGP_BALBcJ_T0030786.1 MGP_BALBcJ_G0018683.1 mouse_genomes_project 11 75365865 75400116 - MGP_BALBcJ_P0030786 Nsrp1 protein_coding protein_coding MGP_BALBcJ_T0030787.1 MGP_BALBcJ_G0018683.1 mouse_genomes_project 11 75372208 75399718 - MGP_BALBcJ_P0030787 Nsrp1 protein_coding protein_coding MGP_BALBcJ_T0030788.1 MGP_BALBcJ_G0018683.1 mouse_genomes_project 11 75376066 75400116 - Nsrp1 protein_coding processed_transcript MGP_BALBcJ_T0032845.1 MGP_BALBcJ_G0019206.1 mouse_genomes_project 11 102536447 102615402 - MGP_BALBcJ_P0032845 Gm884 protein_coding protein_coding MGP_BALBcJ_T0012725.1 MGP_BALBcJ_G0010822.1 mouse_genomes_project 11 101560444 101560765 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012733.1 MGP_BALBcJ_G0010830.1 mouse_genomes_project 11 103942543 103943132 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033117.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502415 107951264 + MGP_BALBcJ_P0033117 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033118.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502489 107951263 + MGP_BALBcJ_P0033118 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033119.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502500 107550881 + Cep112 protein_coding retained_intron MGP_BALBcJ_T0033120.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502514 107518263 + MGP_BALBcJ_P0033120 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033121.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502688 107607962 + MGP_BALBcJ_P0033121 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033122.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502731 107951264 + MGP_BALBcJ_P0033122 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033123.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107502839 107950908 + MGP_BALBcJ_P0033123 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033124.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107577475 107950999 + MGP_BALBcJ_P0033124 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033125.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107607952 107646419 + Cep112 protein_coding retained_intron MGP_BALBcJ_T0033126.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107666893 107850232 + MGP_BALBcJ_P0033126 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033127.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107685228 107747056 + Cep112 protein_coding processed_transcript MGP_BALBcJ_T0033128.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107724586 107950902 + Cep112 protein_coding processed_transcript MGP_BALBcJ_T0033129.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107729026 107946523 + Cep112 protein_coding processed_transcript MGP_BALBcJ_T0033130.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107764493 107950998 + MGP_BALBcJ_P0033130 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033131.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107764500 107951264 + MGP_BALBcJ_P0033131 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033132.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107764509 107951003 + MGP_BALBcJ_P0033132 Cep112 protein_coding protein_coding MGP_BALBcJ_T0033133.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107802173 107898060 + Cep112 protein_coding processed_transcript MGP_BALBcJ_T0033134.1 MGP_BALBcJ_G0019269.1 mouse_genomes_project 11 107844690 107950011 + MGP_BALBcJ_P0033134 Cep112 protein_coding protein_coding MGP_BALBcJ_T0028990.1 MGP_BALBcJ_G0018235.1 mouse_genomes_project 11 51228497 51229228 - MGP_BALBcJ_P0028990 Gm9837 protein_coding protein_coding MGP_BALBcJ_T0031812.1 MGP_BALBcJ_G0018937.1 mouse_genomes_project 11 94809965 94828504 - MGP_BALBcJ_P0031812 Ube2z protein_coding protein_coding MGP_BALBcJ_T0003253.1 MGP_BALBcJ_G0003007.1 mouse_genomes_project 11 94768833 94771046 + Gm29202 antisense antisense MGP_BALBcJ_T0099260.1 MGP_BALBcJ_G0037296.1 mouse_genomes_project 11 69162780 69162886 - Gm22297 snRNA snRNA MGP_BALBcJ_T0030898.1 MGP_BALBcJ_G0018704.1 mouse_genomes_project 11 76526519 76533610 - Traf4 protein_coding retained_intron MGP_BALBcJ_T0030899.1 MGP_BALBcJ_G0018704.1 mouse_genomes_project 11 76527420 76533610 - MGP_BALBcJ_P0030899 Traf4 protein_coding protein_coding MGP_BALBcJ_T0030900.1 MGP_BALBcJ_G0018704.1 mouse_genomes_project 11 76528813 76533537 - Traf4 protein_coding retained_intron MGP_BALBcJ_T0100478.1 MGP_BALBcJ_G0038514.1 mouse_genomes_project 11 362079 362196 - Gm24439 snoRNA snoRNA MGP_BALBcJ_T0009738.1 MGP_BALBcJ_G0007863.1 mouse_genomes_project 11 107079012 107079081 + Mir7223 miRNA miRNA MGP_BALBcJ_T0032090.1 MGP_BALBcJ_G0019007.1 mouse_genomes_project 11 97467086 97478999 + MGP_BALBcJ_P0032090 Gsdma3 protein_coding protein_coding MGP_BALBcJ_T0032091.1 MGP_BALBcJ_G0019007.1 mouse_genomes_project 11 97467086 97478862 + MGP_BALBcJ_P0032091 Gsdma3 protein_coding protein_coding MGP_BALBcJ_T0098739.1 MGP_BALBcJ_G0036793.1 mouse_genomes_project 11 67467957 67468101 - Gm22442 scaRNA scaRNA MGP_BALBcJ_T0099284.1 MGP_BALBcJ_G0037320.1 mouse_genomes_project 11 93639240 93639365 + Gm22456 snRNA snRNA MGP_BALBcJ_T0029206.1 MGP_BALBcJ_G0018294.1 mouse_genomes_project 11 56275951 56284984 + MGP_BALBcJ_P0029206 Gm12253 protein_coding protein_coding MGP_BALBcJ_T0028660.1 MGP_BALBcJ_G0018142.1 mouse_genomes_project 11 44130134 44165356 + MGP_BALBcJ_P0028660 Timd4 protein_coding protein_coding MGP_BALBcJ_T0027690.1 MGP_BALBcJ_G0017907.1 mouse_genomes_project 11 804775 812419 - MGP_BALBcJ_P0027690 Slc35e4 protein_coding protein_coding MGP_BALBcJ_T0027691.1 MGP_BALBcJ_G0017907.1 mouse_genomes_project 11 804776 812419 - MGP_BALBcJ_P0027691 Slc35e4 protein_coding protein_coding MGP_BALBcJ_T0011271.1 MGP_BALBcJ_G0009396.1 mouse_genomes_project 11 538531 538619 - Gm27937 misc_RNA misc_RNA MGP_BALBcJ_T0012450.1 MGP_BALBcJ_G0010547.1 mouse_genomes_project 11 3799687 3800001 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029698.1 MGP_BALBcJ_G0018422.1 mouse_genomes_project 11 65064988 65075149 + MGP_BALBcJ_P0029698 Tmem220 protein_coding protein_coding MGP_BALBcJ_T0029699.1 MGP_BALBcJ_G0018422.1 mouse_genomes_project 11 65064988 65074633 + MGP_BALBcJ_P0029699 Tmem220 protein_coding protein_coding MGP_BALBcJ_T0032990.1 MGP_BALBcJ_G0019242.1 mouse_genomes_project 11 105283851 105298314 + MGP_BALBcJ_P0032990 Psmc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032991.1 MGP_BALBcJ_G0019242.1 mouse_genomes_project 11 105283851 105298314 + MGP_BALBcJ_P0032991 Psmc5 protein_coding protein_coding MGP_BALBcJ_T0012567.1 MGP_BALBcJ_G0010664.1 mouse_genomes_project 11 47326108 47326487 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030565.1 MGP_BALBcJ_G0018635.1 mouse_genomes_project 11 72899804 72924059 + MGP_BALBcJ_P0030565 Ccdc92b protein_coding protein_coding MGP_BALBcJ_T0030207.1 MGP_BALBcJ_G0018536.1 mouse_genomes_project 11 68613570 68619185 - MGP_BALBcJ_P0030207 Cxcl16 protein_coding protein_coding MGP_BALBcJ_T0030208.1 MGP_BALBcJ_G0018536.1 mouse_genomes_project 11 68613825 68618609 - MGP_BALBcJ_P0030208 Cxcl16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030209.1 MGP_BALBcJ_G0018536.1 mouse_genomes_project 11 68614400 68619033 - Cxcl16 protein_coding retained_intron MGP_BALBcJ_T0029571.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60327243 60470166 - MGP_BALBcJ_P0029571 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029572.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60327243 60451706 - MGP_BALBcJ_P0029572 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029573.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60327505 60390005 - MGP_BALBcJ_P0029573 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029574.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60328416 60332033 - MGP_BALBcJ_P0029574 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029575.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60328612 60451672 - MGP_BALBcJ_P0029575 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029576.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60328612 60369203 - MGP_BALBcJ_P0029576 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029577.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60328612 60369979 - MGP_BALBcJ_P0029577 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029578.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60336073 60340859 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029579.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60336323 60340983 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029580.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60337942 60341758 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029581.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60351269 60355129 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029582.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60353835 60361578 - Ncor1 protein_coding processed_transcript MGP_BALBcJ_T0029583.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60355012 60404259 - MGP_BALBcJ_P0029583 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029584.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60364093 60380057 - Ncor1 protein_coding processed_transcript MGP_BALBcJ_T0029585.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60377525 60451706 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029586.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60383983 60394693 - MGP_BALBcJ_P0029586 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029587.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60384028 60396328 - MGP_BALBcJ_P0029587 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029588.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60384048 60394842 - MGP_BALBcJ_P0029588 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029589.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60384050 60470640 - MGP_BALBcJ_P0029589 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029590.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60388103 60394751 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029591.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60396241 60451706 - MGP_BALBcJ_P0029591 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029592.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60403648 60407074 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029593.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60407067 60413432 - Ncor1 protein_coding retained_intron MGP_BALBcJ_T0029594.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60413264 60470157 - MGP_BALBcJ_P0029594 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0029595.1 MGP_BALBcJ_G0018393.1 mouse_genomes_project 11 60432924 60471375 - MGP_BALBcJ_P0029595 Ncor1 protein_coding protein_coding MGP_BALBcJ_T0030472.1 MGP_BALBcJ_G0018591.1 mouse_genomes_project 11 71296252 71341764 + MGP_BALBcJ_P0030472 Itgae protein_coding protein_coding MGP_BALBcJ_T0030473.1 MGP_BALBcJ_G0018591.1 mouse_genomes_project 11 71296252 71355332 + MGP_BALBcJ_P0030473 Itgae protein_coding protein_coding MGP_BALBcJ_T0033562.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115389540 115415105 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033563.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115389540 115394396 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033564.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115389540 115415478 - MGP_BALBcJ_P0033564 Fbf1 protein_coding protein_coding MGP_BALBcJ_T0033565.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115389541 115413239 - MGP_BALBcJ_P0033565 Fbf1 protein_coding protein_coding MGP_BALBcJ_T0033566.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115390497 115398053 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033567.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115401962 115404734 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033568.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115401993 115406109 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033569.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115402329 115415479 - MGP_BALBcJ_P0033569 Fbf1 protein_coding protein_coding MGP_BALBcJ_T0033570.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115403220 115413208 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033571.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115410653 115415491 - Fbf1 protein_coding processed_transcript MGP_BALBcJ_T0033572.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115412004 115415473 - MGP_BALBcJ_P0033572 Fbf1 protein_coding protein_coding MGP_BALBcJ_T0033573.1 MGP_BALBcJ_G0019360.1 mouse_genomes_project 11 115413107 115415090 - Fbf1 protein_coding retained_intron MGP_BALBcJ_T0012701.1 MGP_BALBcJ_G0010798.1 mouse_genomes_project 11 94510127 94510302 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029459.1 MGP_BALBcJ_G0018373.1 mouse_genomes_project 11 59146336 59169602 - MGP_BALBcJ_P0029459 Usp22 protein_coding protein_coding MGP_BALBcJ_T0029460.1 MGP_BALBcJ_G0018373.1 mouse_genomes_project 11 59148565 59151939 - Usp22 protein_coding retained_intron MGP_BALBcJ_T0029461.1 MGP_BALBcJ_G0018373.1 mouse_genomes_project 11 59150256 59153931 - Usp22 protein_coding retained_intron MGP_BALBcJ_T0029462.1 MGP_BALBcJ_G0018373.1 mouse_genomes_project 11 59155941 59162822 - MGP_BALBcJ_P0029462 Usp22 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029463.1 MGP_BALBcJ_G0018373.1 mouse_genomes_project 11 59157318 59169576 - Usp22 protein_coding retained_intron MGP_BALBcJ_T0099228.1 MGP_BALBcJ_G0037264.1 mouse_genomes_project 11 2195931 2196038 + Gm25142 snRNA snRNA MGP_BALBcJ_T0032537.1 MGP_BALBcJ_G0019150.1 mouse_genomes_project 11 100558123 100567553 + MGP_BALBcJ_P0032537 Tmem106a protein_coding protein_coding MGP_BALBcJ_T0032538.1 MGP_BALBcJ_G0019150.1 mouse_genomes_project 11 100558123 100567553 + MGP_BALBcJ_P0032538 Tmem106a protein_coding protein_coding MGP_BALBcJ_T0032539.1 MGP_BALBcJ_G0019150.1 mouse_genomes_project 11 100558125 100565199 + Tmem106a protein_coding processed_transcript MGP_BALBcJ_T0032540.1 MGP_BALBcJ_G0019150.1 mouse_genomes_project 11 100558138 100564705 + MGP_BALBcJ_P0032540 Tmem106a protein_coding protein_coding MGP_BALBcJ_T0032541.1 MGP_BALBcJ_G0019150.1 mouse_genomes_project 11 100558181 100564660 + MGP_BALBcJ_P0032541 Tmem106a protein_coding protein_coding MGP_BALBcJ_T0032542.1 MGP_BALBcJ_G0019150.1 mouse_genomes_project 11 100561959 100566531 + Tmem106a protein_coding processed_transcript MGP_BALBcJ_T0012656.1 MGP_BALBcJ_G0010753.1 mouse_genomes_project 11 75976348 75976528 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028447.1 MGP_BALBcJ_G0018083.1 mouse_genomes_project 11 30410874 30423050 - MGP_BALBcJ_P0028447 Npm1 protein_coding protein_coding MGP_BALBcJ_T0028448.1 MGP_BALBcJ_G0018083.1 mouse_genomes_project 11 30411097 30422916 - MGP_BALBcJ_P0028448 Npm1 protein_coding protein_coding MGP_BALBcJ_T0028449.1 MGP_BALBcJ_G0018083.1 mouse_genomes_project 11 30411098 30413053 - Npm1 protein_coding processed_transcript MGP_BALBcJ_T0028450.1 MGP_BALBcJ_G0018083.1 mouse_genomes_project 11 30413514 30422921 - MGP_BALBcJ_P0028450 Npm1 protein_coding protein_coding MGP_BALBcJ_T0028451.1 MGP_BALBcJ_G0018083.1 mouse_genomes_project 11 30413915 30422920 - MGP_BALBcJ_P0028451 Npm1 protein_coding protein_coding MGP_BALBcJ_T0028452.1 MGP_BALBcJ_G0018083.1 mouse_genomes_project 11 30414728 30415980 - Npm1 protein_coding processed_transcript MGP_BALBcJ_T0030286.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833216 68850124 - MGP_BALBcJ_P0030286 Camta2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030287.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833216 68851707 - MGP_BALBcJ_P0030287 Camta2 protein_coding protein_coding MGP_BALBcJ_T0030288.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833216 68851688 - MGP_BALBcJ_P0030288 Camta2 protein_coding protein_coding MGP_BALBcJ_T0030289.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833216 68851840 - MGP_BALBcJ_P0030289 Camta2 protein_coding protein_coding MGP_BALBcJ_T0030290.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833216 68851678 - MGP_BALBcJ_P0030290 Camta2 protein_coding protein_coding MGP_BALBcJ_T0030291.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833216 68851678 - MGP_BALBcJ_P0030291 Camta2 protein_coding protein_coding MGP_BALBcJ_T0030292.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833217 68851690 - MGP_BALBcJ_P0030292 Camta2 protein_coding protein_coding MGP_BALBcJ_T0030293.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68833219 68847511 - Camta2 protein_coding retained_intron MGP_BALBcJ_T0030294.1 MGP_BALBcJ_G0018552.1 mouse_genomes_project 11 68849648 68851683 - Camta2 protein_coding retained_intron MGP_BALBcJ_T0031332.1 MGP_BALBcJ_G0018819.1 mouse_genomes_project 11 83723692 83737695 + MGP_BALBcJ_P0031332 1700125H20Rik protein_coding protein_coding MGP_BALBcJ_T0031333.1 MGP_BALBcJ_G0018819.1 mouse_genomes_project 11 83724384 83737695 + MGP_BALBcJ_P0031333 1700125H20Rik protein_coding protein_coding MGP_BALBcJ_T0031410.1 MGP_BALBcJ_G0018836.1 mouse_genomes_project 11 85488779 85546866 - MGP_BALBcJ_P0031410 Ypel2 protein_coding protein_coding MGP_BALBcJ_T0000842.1 MGP_BALBcJ_G0000774.1 mouse_genomes_project 11 42639348 42660735 - TEC TEC MGP_BALBcJ_T0017176.1 MGP_BALBcJ_G0015122.1 mouse_genomes_project 11 73879102 73884209 - 4931413K12Rik processed_transcript processed_transcript MGP_BALBcJ_T0030249.1 MGP_BALBcJ_G0018545.1 mouse_genomes_project 11 68780965 68781993 + MGP_BALBcJ_P0030249 4930544D05Rik protein_coding protein_coding MGP_BALBcJ_T0030250.1 MGP_BALBcJ_G0018545.1 mouse_genomes_project 11 68781011 68781988 + 4930544D05Rik protein_coding retained_intron MGP_BALBcJ_T0030251.1 MGP_BALBcJ_G0018545.1 mouse_genomes_project 11 68781014 68782008 + MGP_BALBcJ_P0030251 4930544D05Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030252.1 MGP_BALBcJ_G0018545.1 mouse_genomes_project 11 68781027 68781995 + MGP_BALBcJ_P0030252 4930544D05Rik protein_coding protein_coding MGP_BALBcJ_T0028340.1 MGP_BALBcJ_G0018054.1 mouse_genomes_project 11 27026086 27028148 - MGP_BALBcJ_P0028340 protein_coding protein_coding MGP_BALBcJ_T0029299.1 MGP_BALBcJ_G0018338.1 mouse_genomes_project 11 57372181 57380656 + MGP_BALBcJ_P0029299 Jmjd4 protein_coding protein_coding MGP_BALBcJ_T0029300.1 MGP_BALBcJ_G0018338.1 mouse_genomes_project 11 57372181 57380750 + MGP_BALBcJ_P0029300 Jmjd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029301.1 MGP_BALBcJ_G0018338.1 mouse_genomes_project 11 57372181 57380656 + MGP_BALBcJ_P0029301 Jmjd4 protein_coding protein_coding MGP_BALBcJ_T0029302.1 MGP_BALBcJ_G0018338.1 mouse_genomes_project 11 57372257 57378289 + Jmjd4 protein_coding retained_intron MGP_BALBcJ_T0101617.1 MGP_BALBcJ_G0039633.1 mouse_genomes_project 11 116652380 116653456 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101618.1 MGP_BALBcJ_G0039633.1 mouse_genomes_project 11 116652439 116652866 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0009753.1 MGP_BALBcJ_G0007878.1 mouse_genomes_project 11 119892206 119892260 - Mir6936 miRNA miRNA MGP_BALBcJ_T0033300.1 MGP_BALBcJ_G0019308.1 mouse_genomes_project 11 114179683 114192378 - MGP_BALBcJ_P0033300 Cd300ld protein_coding protein_coding MGP_BALBcJ_T0003163.1 MGP_BALBcJ_G0002936.1 mouse_genomes_project 11 57296094 57300539 + Gm15755 antisense antisense MGP_BALBcJ_T0030973.1 MGP_BALBcJ_G0018720.1 mouse_genomes_project 11 76840069 76846318 + MGP_BALBcJ_P0030973 Slc46a1 protein_coding protein_coding MGP_BALBcJ_T0030974.1 MGP_BALBcJ_G0018720.1 mouse_genomes_project 11 76840122 76845995 + MGP_BALBcJ_P0030974 Slc46a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030975.1 MGP_BALBcJ_G0018720.1 mouse_genomes_project 11 76844598 76846432 + Slc46a1 protein_coding retained_intron MGP_BALBcJ_T0009659.1 MGP_BALBcJ_G0007784.1 mouse_genomes_project 11 56863507 56863645 - Gm44313 miRNA miRNA MGP_BALBcJ_T0029969.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67792673 67798056 - Eif4a1 protein_coding retained_intron MGP_BALBcJ_T0029970.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67792673 67798056 - MGP_BALBcJ_P0029970 Eif4a1 protein_coding protein_coding MGP_BALBcJ_T0029971.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67792674 67798056 - Eif4a1 protein_coding retained_intron MGP_BALBcJ_T0029972.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67792959 67793976 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029973.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67793120 67793802 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029974.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67793191 67794028 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029975.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67794220 67798162 - MGP_BALBcJ_P0029975 Eif4a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029976.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67794893 67798055 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029977.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67794901 67796622 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029978.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67795871 67798054 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029979.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67795918 67797469 - Eif4a1 protein_coding processed_transcript MGP_BALBcJ_T0029980.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67795986 67796961 - Eif4a1 protein_coding retained_intron MGP_BALBcJ_T0029981.1 MGP_BALBcJ_G0018486.1 mouse_genomes_project 11 67796207 67797189 - Eif4a1 protein_coding retained_intron MGP_BALBcJ_T0012442.1 MGP_BALBcJ_G0010539.1 mouse_genomes_project 11 3422050 3422370 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006215.1 MGP_BALBcJ_G0005194.1 mouse_genomes_project 11 55379829 55381929 + Gm12243 lincRNA lincRNA MGP_BALBcJ_T0003187.1 MGP_BALBcJ_G0002956.1 mouse_genomes_project 11 62035320 62037924 + Gm12289 antisense antisense MGP_BALBcJ_T0034230.1 MGP_BALBcJ_G0019494.1 mouse_genomes_project 11 120903294 120960312 - MGP_BALBcJ_P0034230 B3gntl1 protein_coding protein_coding MGP_BALBcJ_T0034231.1 MGP_BALBcJ_G0019494.1 mouse_genomes_project 11 120914358 120960312 - MGP_BALBcJ_P0034231 B3gntl1 protein_coding protein_coding MGP_BALBcJ_T0028584.1 MGP_BALBcJ_G0018120.1 mouse_genomes_project 11 41114428 41176868 - MGP_BALBcJ_P0028584 Adra1b protein_coding protein_coding MGP_BALBcJ_T0028585.1 MGP_BALBcJ_G0018120.1 mouse_genomes_project 11 41114428 41242648 - MGP_BALBcJ_P0028585 Adra1b protein_coding protein_coding MGP_BALBcJ_T0028586.1 MGP_BALBcJ_G0018120.1 mouse_genomes_project 11 41115845 41242648 - MGP_BALBcJ_P0028586 Adra1b protein_coding protein_coding MGP_BALBcJ_T0017221.1 MGP_BALBcJ_G0015149.1 mouse_genomes_project 11 103569872 103579000 - Gm22000 processed_transcript processed_transcript MGP_BALBcJ_T0032214.1 MGP_BALBcJ_G0019054.1 mouse_genomes_project 11 98594765 98594918 - MGP_BALBcJ_P0032214 Gm14190 protein_coding protein_coding MGP_BALBcJ_T0032343.1 MGP_BALBcJ_G0019108.1 mouse_genomes_project 11 99651731 99652457 + MGP_BALBcJ_P0032343 Hspb9 protein_coding protein_coding MGP_BALBcJ_T0032344.1 MGP_BALBcJ_G0019108.1 mouse_genomes_project 11 99651803 99652455 + MGP_BALBcJ_P0032344 Hspb9 protein_coding protein_coding MGP_BALBcJ_T0102151.1 MGP_BALBcJ_G0039968.1 mouse_genomes_project 11 82206897 82207725 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003143.1 MGP_BALBcJ_G0002918.1 mouse_genomes_project 11 49937273 49940168 + Gm12207 antisense antisense MGP_BALBcJ_T0030508.1 MGP_BALBcJ_G0018603.1 mouse_genomes_project 11 71577579 71584096 + MGP_BALBcJ_P0030508 Olfr376 protein_coding protein_coding MGP_BALBcJ_T0030509.1 MGP_BALBcJ_G0018603.1 mouse_genomes_project 11 71577579 71584096 + MGP_BALBcJ_P0030509 Olfr376 protein_coding protein_coding MGP_BALBcJ_T0012634.1 MGP_BALBcJ_G0010731.1 mouse_genomes_project 11 68678850 68679169 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011295.1 MGP_BALBcJ_G0009420.1 mouse_genomes_project 11 116058352 116058525 - Gm27401 misc_RNA misc_RNA MGP_BALBcJ_T0017246.1 MGP_BALBcJ_G0015157.1 mouse_genomes_project 11 116846175 116848786 + 2900041M22Rik processed_transcript processed_transcript MGP_BALBcJ_T0030037.1 MGP_BALBcJ_G0018503.1 mouse_genomes_project 11 68026668 68028003 - MGP_BALBcJ_P0030037 Tmem95 protein_coding protein_coding MGP_BALBcJ_T0032192.1 MGP_BALBcJ_G0019034.1 mouse_genomes_project 11 98292841 98299411 - MGP_BALBcJ_P0032192 Krt12 protein_coding protein_coding MGP_BALBcJ_T0006188.1 MGP_BALBcJ_G0005169.1 mouse_genomes_project 11 30335461 30338885 + lincRNA lincRNA MGP_BALBcJ_T0012593.1 MGP_BALBcJ_G0010690.1 mouse_genomes_project 11 55765252 55765609 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100504.1 MGP_BALBcJ_G0038540.1 mouse_genomes_project 11 46138617 46138684 + Gm25296 snoRNA snoRNA MGP_BALBcJ_T0029925.1 MGP_BALBcJ_G0018475.1 mouse_genomes_project 11 67542618 67668093 - MGP_BALBcJ_P0029925 Dnah2 protein_coding protein_coding MGP_BALBcJ_T0029926.1 MGP_BALBcJ_G0018475.1 mouse_genomes_project 11 67542618 67672647 - MGP_BALBcJ_P0029926 Dnah2 protein_coding protein_coding MGP_BALBcJ_T0029927.1 MGP_BALBcJ_G0018475.1 mouse_genomes_project 11 67542802 67668079 - MGP_BALBcJ_P0029927 Dnah2 protein_coding unknown_likely_coding MGP_BALBcJ_T0029928.1 MGP_BALBcJ_G0018475.1 mouse_genomes_project 11 67586797 67587882 - Dnah2 protein_coding processed_transcript MGP_BALBcJ_T0029929.1 MGP_BALBcJ_G0018475.1 mouse_genomes_project 11 67633367 67672649 - Dnah2 protein_coding processed_transcript MGP_BALBcJ_T0029930.1 MGP_BALBcJ_G0018475.1 mouse_genomes_project 11 67638708 67639457 - Dnah2 protein_coding processed_transcript MGP_BALBcJ_T0029208.1 MGP_BALBcJ_G0018296.1 mouse_genomes_project 11 56298054 56299120 - MGP_BALBcJ_P0029208 Olfr30 protein_coding protein_coding MGP_BALBcJ_T0031709.1 MGP_BALBcJ_G0018908.1 mouse_genomes_project 11 93373448 93384293 - MGP_BALBcJ_P0031709 Gm11541 protein_coding protein_coding MGP_BALBcJ_T0030053.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68054092 68056420 + Neurl4 protein_coding processed_transcript MGP_BALBcJ_T0030054.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68054836 68066536 + MGP_BALBcJ_P0030054 Neurl4 protein_coding protein_coding MGP_BALBcJ_T0030055.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68054836 68066536 + MGP_BALBcJ_P0030055 Neurl4 protein_coding protein_coding MGP_BALBcJ_T0030056.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68054836 68066536 + MGP_BALBcJ_P0030056 Neurl4 protein_coding protein_coding MGP_BALBcJ_T0030057.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68054911 68066841 + MGP_BALBcJ_P0030057 Neurl4 protein_coding protein_coding MGP_BALBcJ_T0030058.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68055047 68058618 + Neurl4 protein_coding retained_intron MGP_BALBcJ_T0030059.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68055176 68056935 + Neurl4 protein_coding processed_transcript MGP_BALBcJ_T0030060.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68056412 68066352 + MGP_BALBcJ_P0030060 Neurl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030061.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68057055 68061756 + MGP_BALBcJ_P0030061 Neurl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030062.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68060284 68061542 + Neurl4 protein_coding retained_intron MGP_BALBcJ_T0030063.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68061655 68063345 + Neurl4 protein_coding retained_intron MGP_BALBcJ_T0030064.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68061996 68063886 + Neurl4 protein_coding retained_intron MGP_BALBcJ_T0030065.1 MGP_BALBcJ_G0018507.1 mouse_genomes_project 11 68064056 68066173 + MGP_BALBcJ_P0030065 Neurl4 protein_coding protein_coding MGP_BALBcJ_T0102140.1 MGP_BALBcJ_G0039957.1 mouse_genomes_project 11 57526568 57526943 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003094.1 MGP_BALBcJ_G0002878.1 mouse_genomes_project 11 75999 76747 - Gm12735 antisense antisense MGP_BALBcJ_T0017218.1 MGP_BALBcJ_G0015147.1 mouse_genomes_project 11 102699175 102704474 + C130046K22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017219.1 MGP_BALBcJ_G0015147.1 mouse_genomes_project 11 102699175 102724230 + C130046K22Rik processed_transcript processed_transcript MGP_BALBcJ_T0028330.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26941398 27232556 - MGP_BALBcJ_P0028330 Eml6 protein_coding unknown_likely_coding MGP_BALBcJ_T0028331.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26941406 27232534 - MGP_BALBcJ_P0028331 Eml6 protein_coding protein_coding MGP_BALBcJ_T0028332.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26942492 26962449 - Eml6 protein_coding retained_intron MGP_BALBcJ_T0028333.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26945008 26949827 - Eml6 protein_coding retained_intron MGP_BALBcJ_T0028334.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26945823 26947880 - Eml6 protein_coding retained_intron MGP_BALBcJ_T0028335.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26948317 26958482 - MGP_BALBcJ_P0028335 Eml6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028336.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 26975075 27232542 - MGP_BALBcJ_P0028336 Eml6 protein_coding unknown_likely_coding MGP_BALBcJ_T0028337.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 27000161 27001272 - Eml6 protein_coding retained_intron MGP_BALBcJ_T0028338.1 MGP_BALBcJ_G0018052.1 mouse_genomes_project 11 27007493 27019815 - MGP_BALBcJ_P0028338 Eml6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034086.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942338 119943719 + Aspscr1 protein_coding retained_intron MGP_BALBcJ_T0034087.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942376 119979324 + MGP_BALBcJ_P0034087 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034088.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942391 119945540 + Aspscr1 protein_coding retained_intron MGP_BALBcJ_T0034089.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942428 119971592 + MGP_BALBcJ_P0034089 Aspscr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034090.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942448 119978946 + MGP_BALBcJ_P0034090 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034091.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942463 119958628 + MGP_BALBcJ_P0034091 Aspscr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034092.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942724 119958731 + MGP_BALBcJ_P0034092 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034093.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942739 119958727 + MGP_BALBcJ_P0034093 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034094.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942739 119948011 + MGP_BALBcJ_P0034094 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034095.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942757 119958687 + MGP_BALBcJ_P0034095 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034096.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119942769 119956261 + MGP_BALBcJ_P0034096 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034097.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119946218 119979316 + MGP_BALBcJ_P0034097 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034098.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119946783 119948003 + MGP_BALBcJ_P0034098 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034099.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119946896 119958857 + MGP_BALBcJ_P0034099 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034100.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119956252 119979317 + MGP_BALBcJ_P0034100 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034101.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119958833 119979317 + MGP_BALBcJ_P0034101 Aspscr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034102.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119958869 119979115 + MGP_BALBcJ_P0034102 Aspscr1 protein_coding protein_coding MGP_BALBcJ_T0034103.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119972541 119979318 + MGP_BALBcJ_P0034103 Aspscr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034104.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119978531 119979316 + Aspscr1 protein_coding retained_intron MGP_BALBcJ_T0034105.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119978633 119979321 + Aspscr1 protein_coding retained_intron MGP_BALBcJ_T0034106.1 MGP_BALBcJ_G0019464.1 mouse_genomes_project 11 119978731 119979319 + Aspscr1 protein_coding retained_intron MGP_BALBcJ_T0030527.1 MGP_BALBcJ_G0018615.1 mouse_genomes_project 11 72029416 72032179 - MGP_BALBcJ_P0030527 Olfr392 protein_coding protein_coding MGP_BALBcJ_T0030528.1 MGP_BALBcJ_G0018615.1 mouse_genomes_project 11 72030030 72032176 - MGP_BALBcJ_P0030528 Olfr392 protein_coding protein_coding MGP_BALBcJ_T0100549.1 MGP_BALBcJ_G0038585.1 mouse_genomes_project 11 115923982 115924058 + Snord1c snoRNA snoRNA MGP_BALBcJ_T0028013.1 MGP_BALBcJ_G0017982.1 mouse_genomes_project 11 6155398 6195966 + Abca13 protein_coding processed_transcript MGP_BALBcJ_T0028014.1 MGP_BALBcJ_G0017982.1 mouse_genomes_project 11 6155398 6676588 + MGP_BALBcJ_P0028014 Abca13 protein_coding protein_coding MGP_BALBcJ_T0028015.1 MGP_BALBcJ_G0017982.1 mouse_genomes_project 11 6225099 6675707 + MGP_BALBcJ_P0028015 Abca13 protein_coding unknown_likely_coding MGP_BALBcJ_T0029882.1 MGP_BALBcJ_G0018464.1 mouse_genomes_project 11 67335341 67354262 - MGP_BALBcJ_P0029882 Gucy2e protein_coding protein_coding MGP_BALBcJ_T0029883.1 MGP_BALBcJ_G0018464.1 mouse_genomes_project 11 67335344 67354262 - MGP_BALBcJ_P0029883 Gucy2e protein_coding protein_coding MGP_BALBcJ_T0029884.1 MGP_BALBcJ_G0018464.1 mouse_genomes_project 11 67338382 67354276 - MGP_BALBcJ_P0029884 Gucy2e protein_coding protein_coding MGP_BALBcJ_T0029885.1 MGP_BALBcJ_G0018464.1 mouse_genomes_project 11 67343886 67354262 - Gucy2e protein_coding processed_transcript MGP_BALBcJ_T0032935.1 MGP_BALBcJ_G0019227.1 mouse_genomes_project 11 104382661 104470429 - MGP_BALBcJ_P0032935 March10 protein_coding protein_coding MGP_BALBcJ_T0032936.1 MGP_BALBcJ_G0019227.1 mouse_genomes_project 11 104385607 104393408 - March10 protein_coding processed_transcript MGP_BALBcJ_T0032937.1 MGP_BALBcJ_G0019227.1 mouse_genomes_project 11 104418322 104430189 - MGP_BALBcJ_P0032937 March10 protein_coding protein_coding MGP_BALBcJ_T0032938.1 MGP_BALBcJ_G0019227.1 mouse_genomes_project 11 104423283 104472762 - MGP_BALBcJ_P0032938 March10 protein_coding protein_coding MGP_BALBcJ_T0011776.1 MGP_BALBcJ_G0009898.1 mouse_genomes_project 11 71596400 71600528 - MGP_BALBcJ_P0011776 Olfr377-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0028620.1 MGP_BALBcJ_G0018129.1 mouse_genomes_project 11 43382933 43478006 + MGP_BALBcJ_P0028620 Adam19 protein_coding protein_coding MGP_BALBcJ_T0028621.1 MGP_BALBcJ_G0018129.1 mouse_genomes_project 11 43382999 43392200 + Adam19 protein_coding processed_transcript MGP_BALBcJ_T0028622.1 MGP_BALBcJ_G0018129.1 mouse_genomes_project 11 43458334 43474509 + Adam19 protein_coding processed_transcript MGP_BALBcJ_T0028623.1 MGP_BALBcJ_G0018129.1 mouse_genomes_project 11 43464503 43468293 + Adam19 protein_coding retained_intron MGP_BALBcJ_T0006356.1 MGP_BALBcJ_G0005300.1 mouse_genomes_project 11 120384799 120385366 - Gm11791 lincRNA lincRNA MGP_BALBcJ_T0100490.1 MGP_BALBcJ_G0038526.1 mouse_genomes_project 11 12484292 12484422 + Gm25490 snoRNA snoRNA MGP_BALBcJ_T0017171.1 MGP_BALBcJ_G0015119.1 mouse_genomes_project 11 70453979 70456134 + 1700051A21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017172.1 MGP_BALBcJ_G0015119.1 mouse_genomes_project 11 70454402 70456116 + 1700051A21Rik processed_transcript processed_transcript MGP_BALBcJ_T0029778.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66759659 66767372 + Myh10 protein_coding processed_transcript MGP_BALBcJ_T0029779.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66760015 66887632 + MGP_BALBcJ_P0029779 Myh10 protein_coding protein_coding MGP_BALBcJ_T0029780.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66760178 66767531 + Myh10 protein_coding processed_transcript MGP_BALBcJ_T0029781.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66760181 66815740 + MGP_BALBcJ_P0029781 Myh10 protein_coding protein_coding MGP_BALBcJ_T0029782.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66760212 66887612 + MGP_BALBcJ_P0029782 Myh10 protein_coding protein_coding MGP_BALBcJ_T0029783.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66760254 66838875 + Myh10 protein_coding retained_intron MGP_BALBcJ_T0029784.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66760416 66887624 + MGP_BALBcJ_P0029784 Myh10 protein_coding protein_coding MGP_BALBcJ_T0029785.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66852663 66859341 + Myh10 protein_coding processed_transcript MGP_BALBcJ_T0029786.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66881079 66882672 + Myh10 protein_coding processed_transcript MGP_BALBcJ_T0029787.1 MGP_BALBcJ_G0018444.1 mouse_genomes_project 11 66884908 66887544 + Myh10 protein_coding processed_transcript MGP_BALBcJ_T0027787.1 MGP_BALBcJ_G0017931.1 mouse_genomes_project 11 1801806 1821591 + MGP_BALBcJ_P0027787 Nipsnap1 protein_coding protein_coding MGP_BALBcJ_T0027788.1 MGP_BALBcJ_G0017931.1 mouse_genomes_project 11 1801854 1821007 + MGP_BALBcJ_P0027788 Nipsnap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027789.1 MGP_BALBcJ_G0017931.1 mouse_genomes_project 11 1801860 1811757 + Nipsnap1 protein_coding processed_transcript MGP_BALBcJ_T0027790.1 MGP_BALBcJ_G0017931.1 mouse_genomes_project 11 1810510 1816542 + MGP_BALBcJ_P0027790 Nipsnap1 protein_coding protein_coding MGP_BALBcJ_T0027791.1 MGP_BALBcJ_G0017931.1 mouse_genomes_project 11 1810522 1817388 + Nipsnap1 protein_coding processed_transcript MGP_BALBcJ_T0027792.1 MGP_BALBcJ_G0017931.1 mouse_genomes_project 11 1810580 1811469 + Nipsnap1 protein_coding processed_transcript MGP_BALBcJ_T0100480.1 MGP_BALBcJ_G0038516.1 mouse_genomes_project 11 1968275 1968372 + Gm24958 snoRNA snoRNA MGP_BALBcJ_T0003348.1 MGP_BALBcJ_G0003084.1 mouse_genomes_project 11 119958705 119979321 - Gm17178 antisense antisense MGP_BALBcJ_T0003206.1 MGP_BALBcJ_G0002970.1 mouse_genomes_project 11 68776864 68778864 - Gm12316 antisense antisense MGP_BALBcJ_T0102172.1 MGP_BALBcJ_G0039989.1 mouse_genomes_project 11 121143512 121147967 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009692.1 MGP_BALBcJ_G0007817.1 mouse_genomes_project 11 75399744 75399853 - Mir423 miRNA miRNA MGP_BALBcJ_T0006154.1 MGP_BALBcJ_G0005141.1 mouse_genomes_project 11 16630050 16631351 - Gm12027 lincRNA lincRNA MGP_BALBcJ_T0099304.1 MGP_BALBcJ_G0037340.1 mouse_genomes_project 11 117427393 117427488 - Gm24060 snRNA snRNA MGP_BALBcJ_T0012532.1 MGP_BALBcJ_G0010629.1 mouse_genomes_project 11 30030351 30031309 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003324.1 MGP_BALBcJ_G0003065.1 mouse_genomes_project 11 115168879 115169994 + Recql5os1 antisense antisense MGP_BALBcJ_T0032233.1 MGP_BALBcJ_G0019073.1 mouse_genomes_project 11 98899118 98900147 - MGP_BALBcJ_P0032233 Krtap29-1 protein_coding protein_coding MGP_BALBcJ_T0028844.1 MGP_BALBcJ_G0018194.1 mouse_genomes_project 11 48469384 48481483 - MGP_BALBcJ_P0028844 Zfp2 protein_coding protein_coding MGP_BALBcJ_T0028845.1 MGP_BALBcJ_G0018194.1 mouse_genomes_project 11 48469384 48486815 - MGP_BALBcJ_P0028845 Zfp2 protein_coding protein_coding MGP_BALBcJ_T0028846.1 MGP_BALBcJ_G0018194.1 mouse_genomes_project 11 48469731 48486838 - MGP_BALBcJ_P0028846 Zfp2 protein_coding protein_coding MGP_BALBcJ_T0028847.1 MGP_BALBcJ_G0018194.1 mouse_genomes_project 11 48471919 48486804 - Zfp2 protein_coding processed_transcript MGP_BALBcJ_T0028848.1 MGP_BALBcJ_G0018194.1 mouse_genomes_project 11 48475856 48486825 - Zfp2 protein_coding processed_transcript MGP_BALBcJ_T0028849.1 MGP_BALBcJ_G0018194.1 mouse_genomes_project 11 48476662 48486807 - Zfp2 protein_coding processed_transcript MGP_BALBcJ_T0030551.1 MGP_BALBcJ_G0018629.1 mouse_genomes_project 11 72496278 72497367 + MGP_BALBcJ_P0030551 Olfr406 protein_coding protein_coding MGP_BALBcJ_T0032729.1 MGP_BALBcJ_G0019181.1 mouse_genomes_project 11 101592022 101595081 - MGP_BALBcJ_P0032729 Gm11627 protein_coding protein_coding MGP_BALBcJ_T0032730.1 MGP_BALBcJ_G0019181.1 mouse_genomes_project 11 101592068 101594895 - Gm11627 protein_coding processed_transcript MGP_BALBcJ_T0032731.1 MGP_BALBcJ_G0019181.1 mouse_genomes_project 11 101592115 101594738 - MGP_BALBcJ_P0032731 Gm11627 protein_coding protein_coding MGP_BALBcJ_T0032645.1 MGP_BALBcJ_G0019170.1 mouse_genomes_project 11 101272165 101283141 + MGP_BALBcJ_P0032645 Asb16 protein_coding protein_coding MGP_BALBcJ_T0029720.1 MGP_BALBcJ_G0018428.1 mouse_genomes_project 11 65278609 65301029 + MGP_BALBcJ_P0029720 Myh4 protein_coding protein_coding MGP_BALBcJ_T0029721.1 MGP_BALBcJ_G0018428.1 mouse_genomes_project 11 65281177 65300988 + MGP_BALBcJ_P0029721 Myh4 protein_coding protein_coding MGP_BALBcJ_T0099294.1 MGP_BALBcJ_G0037330.1 mouse_genomes_project 11 100611135 100611795 + Gm23849 snRNA snRNA MGP_BALBcJ_T0012597.1 MGP_BALBcJ_G0010694.1 mouse_genomes_project 11 56224404 56226759 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029125.1 MGP_BALBcJ_G0018267.1 mouse_genomes_project 11 52972528 53000641 - MGP_BALBcJ_P0029125 Slc36a2 protein_coding protein_coding MGP_BALBcJ_T0029126.1 MGP_BALBcJ_G0018267.1 mouse_genomes_project 11 52982328 53000641 - Slc36a2 protein_coding processed_transcript MGP_BALBcJ_T0030547.1 MGP_BALBcJ_G0018627.1 mouse_genomes_project 11 72407618 72419508 + MGP_BALBcJ_P0030547 protein_coding protein_coding MGP_BALBcJ_T0030548.1 MGP_BALBcJ_G0018627.1 mouse_genomes_project 11 72407642 72414628 + protein_coding processed_transcript MGP_BALBcJ_T0030549.1 MGP_BALBcJ_G0018627.1 mouse_genomes_project 11 72416889 72419508 + MGP_BALBcJ_P0030549 protein_coding protein_coding MGP_BALBcJ_T0031673.1 MGP_BALBcJ_G0018899.1 mouse_genomes_project 11 93172769 93183125 - MGP_BALBcJ_P0031673 Epn3 protein_coding protein_coding MGP_BALBcJ_T0031674.1 MGP_BALBcJ_G0018899.1 mouse_genomes_project 11 93174265 93183060 - Epn3 protein_coding processed_transcript MGP_BALBcJ_T0031675.1 MGP_BALBcJ_G0018899.1 mouse_genomes_project 11 93174303 93183012 - MGP_BALBcJ_P0031675 Epn3 protein_coding unknown_likely_coding MGP_BALBcJ_T0031676.1 MGP_BALBcJ_G0018899.1 mouse_genomes_project 11 93179155 93181404 - Epn3 protein_coding processed_transcript MGP_BALBcJ_T0031677.1 MGP_BALBcJ_G0018899.1 mouse_genomes_project 11 93179519 93182271 - Epn3 protein_coding processed_transcript MGP_BALBcJ_T0006316.1 MGP_BALBcJ_G0005268.1 mouse_genomes_project 11 106578931 106595254 - C330019F10Rik lincRNA lincRNA MGP_BALBcJ_T0033617.1 MGP_BALBcJ_G0019371.1 mouse_genomes_project 11 115690588 115703662 - MGP_BALBcJ_P0033617 Qrich2 protein_coding protein_coding MGP_BALBcJ_T0033618.1 MGP_BALBcJ_G0019371.1 mouse_genomes_project 11 115690590 115704552 - MGP_BALBcJ_P0033618 Qrich2 protein_coding protein_coding MGP_BALBcJ_T0033619.1 MGP_BALBcJ_G0019371.1 mouse_genomes_project 11 115693765 115696238 - Qrich2 protein_coding retained_intron MGP_BALBcJ_T0012708.1 MGP_BALBcJ_G0010805.1 mouse_genomes_project 11 96591334 96591630 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012734.1 MGP_BALBcJ_G0010831.1 mouse_genomes_project 11 104045568 104046257 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003309.1 MGP_BALBcJ_G0003054.1 mouse_genomes_project 11 107264630 107277409 + Gm11655 antisense antisense MGP_BALBcJ_T0033068.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106032591 106045138 - MGP_BALBcJ_P0033068 Gm10184 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033069.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106032591 106045239 - MGP_BALBcJ_P0033069 Gm10184 protein_coding protein_coding MGP_BALBcJ_T0033070.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106036141 106045169 - MGP_BALBcJ_P0033070 Gm10184 protein_coding unknown_likely_coding MGP_BALBcJ_T0033071.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106036476 106037450 - Gm10184 protein_coding retained_intron MGP_BALBcJ_T0033072.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106036634 106044185 - MGP_BALBcJ_P0033072 Gm10184 protein_coding protein_coding MGP_BALBcJ_T0033073.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106036634 106045148 - MGP_BALBcJ_P0033073 Gm10184 protein_coding protein_coding MGP_BALBcJ_T0033074.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106036634 106044591 - MGP_BALBcJ_P0033074 Gm10184 protein_coding protein_coding MGP_BALBcJ_T0033075.1 MGP_BALBcJ_G0019258.1 mouse_genomes_project 11 106040744 106045067 - MGP_BALBcJ_P0033075 Gm10184 protein_coding protein_coding MGP_BALBcJ_T0027992.1 MGP_BALBcJ_G0017977.1 mouse_genomes_project 11 5799527 5939429 - MGP_BALBcJ_P0027992 Pkd1l1 protein_coding protein_coding MGP_BALBcJ_T0027993.1 MGP_BALBcJ_G0017977.1 mouse_genomes_project 11 5799594 5916389 - MGP_BALBcJ_P0027993 Pkd1l1 protein_coding protein_coding MGP_BALBcJ_T0027994.1 MGP_BALBcJ_G0017977.1 mouse_genomes_project 11 5816563 5833858 - Pkd1l1 protein_coding processed_transcript MGP_BALBcJ_T0028339.1 MGP_BALBcJ_G0018053.1 mouse_genomes_project 11 27021289 27028134 - MGP_BALBcJ_P0028339 protein_coding protein_coding MGP_BALBcJ_T0032333.1 MGP_BALBcJ_G0019106.1 mouse_genomes_project 11 99632925 99642163 - MGP_BALBcJ_P0032333 Dhx58 protein_coding protein_coding MGP_BALBcJ_T0032334.1 MGP_BALBcJ_G0019106.1 mouse_genomes_project 11 99633104 99634662 - Dhx58 protein_coding processed_transcript MGP_BALBcJ_T0032335.1 MGP_BALBcJ_G0019106.1 mouse_genomes_project 11 99633294 99637127 - Dhx58 protein_coding processed_transcript MGP_BALBcJ_T0032336.1 MGP_BALBcJ_G0019106.1 mouse_genomes_project 11 99639283 99642145 - Dhx58 protein_coding processed_transcript MGP_BALBcJ_T0032337.1 MGP_BALBcJ_G0019106.1 mouse_genomes_project 11 99640039 99641239 - Dhx58 protein_coding processed_transcript MGP_BALBcJ_T0032338.1 MGP_BALBcJ_G0019106.1 mouse_genomes_project 11 99640651 99642163 - Dhx58 protein_coding processed_transcript MGP_BALBcJ_T0032426.1 MGP_BALBcJ_G0019128.1 mouse_genomes_project 11 100126186 100128633 - MGP_BALBcJ_P0032426 Ccr10 protein_coding protein_coding MGP_BALBcJ_T0101844.1 MGP_BALBcJ_G0039764.1 mouse_genomes_project 11 49829892 49830765 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0009693.1 MGP_BALBcJ_G0007818.1 mouse_genomes_project 11 76425438 76425504 + Mir144 miRNA miRNA MGP_BALBcJ_T0012629.1 MGP_BALBcJ_G0010726.1 mouse_genomes_project 11 67860213 67860803 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030463.1 MGP_BALBcJ_G0018588.1 mouse_genomes_project 11 71202264 71218327 + MGP_BALBcJ_P0030463 P2rx1 protein_coding protein_coding MGP_BALBcJ_T0030464.1 MGP_BALBcJ_G0018588.1 mouse_genomes_project 11 71202476 71217253 + MGP_BALBcJ_P0030464 P2rx1 protein_coding protein_coding MGP_BALBcJ_T0030465.1 MGP_BALBcJ_G0018588.1 mouse_genomes_project 11 71212917 71218324 + P2rx1 protein_coding retained_intron MGP_BALBcJ_T0006245.1 MGP_BALBcJ_G0005219.1 mouse_genomes_project 11 69886392 69888427 - Gm12325 lincRNA lincRNA MGP_BALBcJ_T0032853.1 MGP_BALBcJ_G0019210.1 mouse_genomes_project 11 102728759 102751217 - MGP_BALBcJ_P0032853 Wnt9b protein_coding protein_coding MGP_BALBcJ_T0031238.1 MGP_BALBcJ_G0018800.1 mouse_genomes_project 11 82274554 82280257 + MGP_BALBcJ_P0031238 Wfdc21 protein_coding protein_coding MGP_BALBcJ_T0028350.1 MGP_BALBcJ_G0018056.1 mouse_genomes_project 11 27662771 27706793 - MGP_BALBcJ_P0028350 4930505A04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028351.1 MGP_BALBcJ_G0018056.1 mouse_genomes_project 11 27662771 27706774 - MGP_BALBcJ_P0028351 4930505A04Rik protein_coding protein_coding MGP_BALBcJ_T0006180.1 MGP_BALBcJ_G0005163.1 mouse_genomes_project 11 26804138 26839336 - Gm12092 lincRNA lincRNA MGP_BALBcJ_T0031406.1 MGP_BALBcJ_G0018835.1 mouse_genomes_project 11 85330209 85369136 - MGP_BALBcJ_P0031406 Dhx40 protein_coding protein_coding MGP_BALBcJ_T0031407.1 MGP_BALBcJ_G0018835.1 mouse_genomes_project 11 85337007 85362470 - MGP_BALBcJ_P0031407 Dhx40 protein_coding protein_coding MGP_BALBcJ_T0031408.1 MGP_BALBcJ_G0018835.1 mouse_genomes_project 11 85345908 85350598 - Dhx40 protein_coding processed_transcript MGP_BALBcJ_T0031409.1 MGP_BALBcJ_G0018835.1 mouse_genomes_project 11 85360968 85368429 - Dhx40 protein_coding processed_transcript MGP_BALBcJ_T0028408.1 MGP_BALBcJ_G0018072.1 mouse_genomes_project 11 29468650 29474168 + MGP_BALBcJ_P0028408 Mpg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028409.1 MGP_BALBcJ_G0018072.1 mouse_genomes_project 11 29468656 29474846 + MGP_BALBcJ_P0028409 Mpg protein_coding protein_coding MGP_BALBcJ_T0028410.1 MGP_BALBcJ_G0018072.1 mouse_genomes_project 11 29468675 29470543 + Mpg protein_coding retained_intron MGP_BALBcJ_T0028411.1 MGP_BALBcJ_G0018072.1 mouse_genomes_project 11 29468684 29473390 + MGP_BALBcJ_P0028411 Mpg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029478.1 MGP_BALBcJ_G0018377.1 mouse_genomes_project 11 59339533 59375017 - MGP_BALBcJ_P0029478 Slc47a1 protein_coding protein_coding MGP_BALBcJ_T0029479.1 MGP_BALBcJ_G0018377.1 mouse_genomes_project 11 59339534 59375000 - MGP_BALBcJ_P0029479 Slc47a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029480.1 MGP_BALBcJ_G0018377.1 mouse_genomes_project 11 59359347 59362664 - Slc47a1 protein_coding processed_transcript MGP_BALBcJ_T0029481.1 MGP_BALBcJ_G0018377.1 mouse_genomes_project 11 59359524 59375281 - MGP_BALBcJ_P0029481 Slc47a1 protein_coding protein_coding MGP_BALBcJ_T0032381.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99960310 99972263 + Atp6v0a1 protein_coding processed_transcript MGP_BALBcJ_T0032382.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99960310 99996557 + Atp6v0a1 protein_coding processed_transcript MGP_BALBcJ_T0032383.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99960310 100014186 + MGP_BALBcJ_P0032383 Atp6v0a1 protein_coding protein_coding MGP_BALBcJ_T0032384.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99960310 100015481 + MGP_BALBcJ_P0032384 Atp6v0a1 protein_coding protein_coding MGP_BALBcJ_T0032385.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99960345 100015475 + MGP_BALBcJ_P0032385 Atp6v0a1 protein_coding protein_coding MGP_BALBcJ_T0032386.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99961515 99971368 + MGP_BALBcJ_P0032386 Atp6v0a1 protein_coding protein_coding MGP_BALBcJ_T0032387.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99962679 100015481 + MGP_BALBcJ_P0032387 Atp6v0a1 protein_coding protein_coding MGP_BALBcJ_T0032388.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99971989 99978609 + Atp6v0a1 protein_coding processed_transcript MGP_BALBcJ_T0032389.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99991574 100000999 + Atp6v0a1 protein_coding processed_transcript MGP_BALBcJ_T0032390.1 MGP_BALBcJ_G0019117.1 mouse_genomes_project 11 99995548 99996560 + Atp6v0a1 protein_coding processed_transcript MGP_BALBcJ_T0030572.1 MGP_BALBcJ_G0018637.1 mouse_genomes_project 11 72956475 73006009 - Pafah1b1 protein_coding retained_intron MGP_BALBcJ_T0030573.1 MGP_BALBcJ_G0018637.1 mouse_genomes_project 11 72956475 73006353 - MGP_BALBcJ_P0030573 Pafah1b1 protein_coding protein_coding MGP_BALBcJ_T0030574.1 MGP_BALBcJ_G0018637.1 mouse_genomes_project 11 72956476 73005992 - Pafah1b1 protein_coding retained_intron MGP_BALBcJ_T0030575.1 MGP_BALBcJ_G0018637.1 mouse_genomes_project 11 72956476 73005532 - MGP_BALBcJ_P0030575 Pafah1b1 protein_coding protein_coding MGP_BALBcJ_T0030576.1 MGP_BALBcJ_G0018637.1 mouse_genomes_project 11 72971372 73004845 - MGP_BALBcJ_P0030576 Pafah1b1 protein_coding protein_coding MGP_BALBcJ_T0030658.1 MGP_BALBcJ_G0018656.1 mouse_genomes_project 11 73802905 73815785 + MGP_BALBcJ_P0030658 Scarf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030659.1 MGP_BALBcJ_G0018656.1 mouse_genomes_project 11 73802908 73815787 + MGP_BALBcJ_P0030659 Scarf1 protein_coding protein_coding MGP_BALBcJ_T0012720.1 MGP_BALBcJ_G0010817.1 mouse_genomes_project 11 100309085 100309322 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012485.1 MGP_BALBcJ_G0010582.1 mouse_genomes_project 11 17493603 17494002 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003305.1 MGP_BALBcJ_G0003050.1 mouse_genomes_project 11 106399082 106405837 + Gm11716 antisense antisense MGP_BALBcJ_T0032254.1 MGP_BALBcJ_G0019087.1 mouse_genomes_project 11 99125223 99128092 - Krt14 protein_coding processed_transcript MGP_BALBcJ_T0032255.1 MGP_BALBcJ_G0019087.1 mouse_genomes_project 11 99125223 99129586 - MGP_BALBcJ_P0032255 Krt14 protein_coding protein_coding MGP_BALBcJ_T0033143.1 MGP_BALBcJ_G0019272.1 mouse_genomes_project 11 108322821 108395870 - MGP_BALBcJ_P0033143 Rgs9 protein_coding protein_coding MGP_BALBcJ_T0033144.1 MGP_BALBcJ_G0019272.1 mouse_genomes_project 11 108322827 108347604 - MGP_BALBcJ_P0033144 Rgs9 protein_coding protein_coding MGP_BALBcJ_T0033145.1 MGP_BALBcJ_G0019272.1 mouse_genomes_project 11 108332511 108395807 - MGP_BALBcJ_P0033145 Rgs9 protein_coding protein_coding MGP_BALBcJ_T0033146.1 MGP_BALBcJ_G0019272.1 mouse_genomes_project 11 108336970 108344418 - Rgs9 protein_coding processed_transcript MGP_BALBcJ_T0033147.1 MGP_BALBcJ_G0019272.1 mouse_genomes_project 11 108353397 108395847 - MGP_BALBcJ_P0033147 Rgs9 protein_coding protein_coding MGP_BALBcJ_T0031352.1 MGP_BALBcJ_G0018823.1 mouse_genomes_project 11 84389218 84398616 + MGP_BALBcJ_P0031352 Tbx2 protein_coding protein_coding MGP_BALBcJ_T0030702.1 MGP_BALBcJ_G0018663.1 mouse_genomes_project 11 74070279 74097877 - MGP_BALBcJ_P0030702 Doc2b protein_coding protein_coding MGP_BALBcJ_T0003316.1 MGP_BALBcJ_G0003058.1 mouse_genomes_project 11 108538801 108540037 - Gm15642 antisense antisense MGP_BALBcJ_T0012496.1 MGP_BALBcJ_G0010593.1 mouse_genomes_project 11 18549144 18549475 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030218.1 MGP_BALBcJ_G0018539.1 mouse_genomes_project 11 68674766 68675867 - MGP_BALBcJ_P0030218 Vmo1 protein_coding protein_coding MGP_BALBcJ_T0003184.1 MGP_BALBcJ_G0002954.1 mouse_genomes_project 11 61011077 61024753 - Cdrt4os1 antisense antisense MGP_BALBcJ_T0003185.1 MGP_BALBcJ_G0002954.1 mouse_genomes_project 11 61019739 61024759 - Cdrt4os1 antisense antisense MGP_BALBcJ_T0033245.1 MGP_BALBcJ_G0019296.1 mouse_genomes_project 11 112904705 112929626 - MGP_BALBcJ_P0033245 Cdc42ep4 protein_coding protein_coding MGP_BALBcJ_T0033246.1 MGP_BALBcJ_G0019296.1 mouse_genomes_project 11 112904707 112930189 - MGP_BALBcJ_P0033246 Cdc42ep4 protein_coding protein_coding MGP_BALBcJ_T0033247.1 MGP_BALBcJ_G0019296.1 mouse_genomes_project 11 112906838 112917176 - MGP_BALBcJ_P0033247 Cdc42ep4 protein_coding protein_coding MGP_BALBcJ_T0033248.1 MGP_BALBcJ_G0019296.1 mouse_genomes_project 11 112907160 112929462 - MGP_BALBcJ_P0033248 Cdc42ep4 protein_coding protein_coding MGP_BALBcJ_T0100514.1 MGP_BALBcJ_G0038550.1 mouse_genomes_project 11 60618870 60618942 + Snord49a snoRNA snoRNA MGP_BALBcJ_T0030343.1 MGP_BALBcJ_G0018560.1 mouse_genomes_project 11 69144078 69149269 - MGP_BALBcJ_P0030343 C1qbp protein_coding protein_coding MGP_BALBcJ_T0030344.1 MGP_BALBcJ_G0018560.1 mouse_genomes_project 11 69144090 69145115 - C1qbp protein_coding retained_intron MGP_BALBcJ_T0030345.1 MGP_BALBcJ_G0018560.1 mouse_genomes_project 11 69147275 69149250 - C1qbp protein_coding retained_intron MGP_BALBcJ_T0032685.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101412873 101417378 - MGP_BALBcJ_P0032685 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032686.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101412873 101417433 - MGP_BALBcJ_P0032686 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032687.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101412930 101414382 - MGP_BALBcJ_P0032687 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032688.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101413033 101417395 - Slc25a39 protein_coding retained_intron MGP_BALBcJ_T0032689.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101413679 101417397 - MGP_BALBcJ_P0032689 Slc25a39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032690.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101413906 101417345 - Slc25a39 protein_coding retained_intron MGP_BALBcJ_T0032691.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101413920 101416705 - MGP_BALBcJ_P0032691 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032692.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101413950 101417376 - MGP_BALBcJ_P0032692 Slc25a39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032693.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101414277 101417352 - Slc25a39 protein_coding retained_intron MGP_BALBcJ_T0032694.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101414372 101417204 - MGP_BALBcJ_P0032694 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032695.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101414497 101416844 - MGP_BALBcJ_P0032695 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032696.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101414675 101417272 - MGP_BALBcJ_P0032696 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032697.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101414742 101417835 - MGP_BALBcJ_P0032697 Slc25a39 protein_coding protein_coding MGP_BALBcJ_T0032698.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101414911 101416697 - Slc25a39 protein_coding processed_transcript MGP_BALBcJ_T0032699.1 MGP_BALBcJ_G0019176.1 mouse_genomes_project 11 101415627 101416773 - Slc25a39 protein_coding retained_intron MGP_BALBcJ_T0029411.1 MGP_BALBcJ_G0018362.1 mouse_genomes_project 11 58694083 58694682 - Flii protein_coding retained_intron MGP_BALBcJ_T0029412.1 MGP_BALBcJ_G0018362.1 mouse_genomes_project 11 58694103 58707224 - MGP_BALBcJ_P0029412 Flii protein_coding protein_coding MGP_BALBcJ_T0029413.1 MGP_BALBcJ_G0018362.1 mouse_genomes_project 11 58699187 58700102 - Flii protein_coding retained_intron MGP_BALBcJ_T0029414.1 MGP_BALBcJ_G0018362.1 mouse_genomes_project 11 58704325 58707184 - Flii protein_coding retained_intron MGP_BALBcJ_T0012580.1 MGP_BALBcJ_G0010677.1 mouse_genomes_project 11 51677338 51677737 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031612.1 MGP_BALBcJ_G0018889.1 mouse_genomes_project 11 92613705 92626172 - MGP_BALBcJ_P0031612 Nme1 protein_coding protein_coding MGP_BALBcJ_T0031613.1 MGP_BALBcJ_G0018889.1 mouse_genomes_project 11 92616204 92623682 - MGP_BALBcJ_P0031613 Nme1 protein_coding protein_coding MGP_BALBcJ_T0031614.1 MGP_BALBcJ_G0018889.1 mouse_genomes_project 11 92617891 92625913 - MGP_BALBcJ_P0031614 Nme1 protein_coding protein_coding MGP_BALBcJ_T0029650.1 MGP_BALBcJ_G0018408.1 mouse_genomes_project 11 61153559 61184124 + MGP_BALBcJ_P0029650 Pmp22 protein_coding protein_coding MGP_BALBcJ_T0029651.1 MGP_BALBcJ_G0018408.1 mouse_genomes_project 11 61156089 61184125 + MGP_BALBcJ_P0029651 Pmp22 protein_coding protein_coding MGP_BALBcJ_T0029652.1 MGP_BALBcJ_G0018408.1 mouse_genomes_project 11 61157146 61183062 + MGP_BALBcJ_P0029652 Pmp22 protein_coding protein_coding MGP_BALBcJ_T0029653.1 MGP_BALBcJ_G0018408.1 mouse_genomes_project 11 61157380 61159067 + Pmp22 protein_coding processed_transcript MGP_BALBcJ_T0029654.1 MGP_BALBcJ_G0018408.1 mouse_genomes_project 11 61157645 61183144 + MGP_BALBcJ_P0029654 Pmp22 protein_coding protein_coding MGP_BALBcJ_T0012558.1 MGP_BALBcJ_G0010655.1 mouse_genomes_project 11 43883482 43884059 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011277.1 MGP_BALBcJ_G0009402.1 mouse_genomes_project 11 48901522 48901777 + Gm25082 misc_RNA misc_RNA MGP_BALBcJ_T0003142.1 MGP_BALBcJ_G0002917.1 mouse_genomes_project 11 49679144 49679812 - Gm12205 antisense antisense MGP_BALBcJ_T0030260.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68810978 68811850 + Rnf167 protein_coding processed_transcript MGP_BALBcJ_T0030261.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811030 68815161 + MGP_BALBcJ_P0030261 Rnf167 protein_coding protein_coding MGP_BALBcJ_T0030262.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811030 68815152 + MGP_BALBcJ_P0030262 Rnf167 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030263.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811298 68813509 + MGP_BALBcJ_P0030263 Rnf167 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030264.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811304 68815150 + Rnf167 protein_coding retained_intron MGP_BALBcJ_T0030265.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811312 68811998 + Rnf167 protein_coding retained_intron MGP_BALBcJ_T0030266.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811686 68814078 + Rnf167 protein_coding retained_intron MGP_BALBcJ_T0030267.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68811818 68814831 + Rnf167 protein_coding retained_intron MGP_BALBcJ_T0030268.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68812865 68813276 + Rnf167 protein_coding retained_intron MGP_BALBcJ_T0030269.1 MGP_BALBcJ_G0018548.1 mouse_genomes_project 11 68813679 68814078 + Rnf167 protein_coding retained_intron MGP_BALBcJ_T0032248.1 MGP_BALBcJ_G0019084.1 mouse_genomes_project 11 99053843 99058023 - MGP_BALBcJ_P0032248 Krt15 protein_coding protein_coding MGP_BALBcJ_T0032249.1 MGP_BALBcJ_G0019084.1 mouse_genomes_project 11 99055120 99056490 - Krt15 protein_coding retained_intron MGP_BALBcJ_T0031819.1 MGP_BALBcJ_G0018940.1 mouse_genomes_project 11 94902560 94934225 + MGP_BALBcJ_P0031819 Ttll6 protein_coding protein_coding MGP_BALBcJ_T0031820.1 MGP_BALBcJ_G0018940.1 mouse_genomes_project 11 94902625 94933561 + MGP_BALBcJ_P0031820 Ttll6 protein_coding protein_coding MGP_BALBcJ_T0102134.1 MGP_BALBcJ_G0039951.1 mouse_genomes_project 11 48570637 48571592 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0029871.1 MGP_BALBcJ_G0018461.1 mouse_genomes_project 11 67238876 67262256 + MGP_BALBcJ_P0029871 Aloxe3 protein_coding protein_coding MGP_BALBcJ_T0029872.1 MGP_BALBcJ_G0018461.1 mouse_genomes_project 11 67239195 67248454 + Aloxe3 protein_coding retained_intron MGP_BALBcJ_T0029873.1 MGP_BALBcJ_G0018461.1 mouse_genomes_project 11 67239383 67247465 + MGP_BALBcJ_P0029873 Aloxe3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029874.1 MGP_BALBcJ_G0018461.1 mouse_genomes_project 11 67247082 67248047 + Aloxe3 protein_coding retained_intron MGP_BALBcJ_T0029875.1 MGP_BALBcJ_G0018461.1 mouse_genomes_project 11 67247257 67255858 + Aloxe3 protein_coding retained_intron MGP_BALBcJ_T0029876.1 MGP_BALBcJ_G0018461.1 mouse_genomes_project 11 67248485 67255936 + Aloxe3 protein_coding retained_intron MGP_BALBcJ_T0032211.1 MGP_BALBcJ_G0019051.1 mouse_genomes_project 11 98532245 98532823 - MGP_BALBcJ_P0032211 Gm11555 protein_coding protein_coding MGP_BALBcJ_T0032236.1 MGP_BALBcJ_G0019076.1 mouse_genomes_project 11 98933497 98939206 - MGP_BALBcJ_P0032236 Krt33a protein_coding protein_coding MGP_BALBcJ_T0033781.1 MGP_BALBcJ_G0019404.1 mouse_genomes_project 11 117266712 117374802 - MGP_BALBcJ_P0033781 Dnah17 protein_coding protein_coding MGP_BALBcJ_T0033782.1 MGP_BALBcJ_G0019404.1 mouse_genomes_project 11 117266712 117374802 - MGP_BALBcJ_P0033782 Dnah17 protein_coding protein_coding MGP_BALBcJ_T0033783.1 MGP_BALBcJ_G0019404.1 mouse_genomes_project 11 117268067 117348972 - MGP_BALBcJ_P0033783 Dnah17 protein_coding protein_coding MGP_BALBcJ_T0033784.1 MGP_BALBcJ_G0019404.1 mouse_genomes_project 11 117332844 117339188 - MGP_BALBcJ_P0033784 Dnah17 protein_coding protein_coding MGP_BALBcJ_T0033785.1 MGP_BALBcJ_G0019404.1 mouse_genomes_project 11 117357857 117371300 - MGP_BALBcJ_P0033785 Dnah17 protein_coding protein_coding MGP_BALBcJ_T0034224.1 MGP_BALBcJ_G0019493.1 mouse_genomes_project 11 120797153 120805550 - MGP_BALBcJ_P0034224 Zfp750 protein_coding protein_coding MGP_BALBcJ_T0032870.1 MGP_BALBcJ_G0019215.1 mouse_genomes_project 11 103194609 103196834 + MGP_BALBcJ_P0032870 Sppl2c protein_coding protein_coding MGP_BALBcJ_T0032871.1 MGP_BALBcJ_G0019215.1 mouse_genomes_project 11 103194609 103199832 + MGP_BALBcJ_P0032871 Sppl2c protein_coding protein_coding MGP_BALBcJ_T0031773.1 MGP_BALBcJ_G0018925.1 mouse_genomes_project 11 94252797 94257510 - MGP_BALBcJ_P0031773 Nxph3 protein_coding protein_coding MGP_BALBcJ_T0012500.1 MGP_BALBcJ_G0010597.1 mouse_genomes_project 11 19446701 19448605 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006286.1 MGP_BALBcJ_G0005246.1 mouse_genomes_project 11 87637844 87641167 - Gm11496 lincRNA lincRNA MGP_BALBcJ_T0030097.1 MGP_BALBcJ_G0018514.1 mouse_genomes_project 11 68135062 68143585 + MGP_BALBcJ_P0030097 Ctdnep1 protein_coding protein_coding MGP_BALBcJ_T0030098.1 MGP_BALBcJ_G0018514.1 mouse_genomes_project 11 68137832 68143096 + Ctdnep1 protein_coding retained_intron MGP_BALBcJ_T0030099.1 MGP_BALBcJ_G0018514.1 mouse_genomes_project 11 68142618 68143705 + Ctdnep1 protein_coding retained_intron MGP_BALBcJ_T0030100.1 MGP_BALBcJ_G0018514.1 mouse_genomes_project 11 68142638 68143950 + Ctdnep1 protein_coding processed_transcript MGP_BALBcJ_T0011296.1 MGP_BALBcJ_G0009421.1 mouse_genomes_project 11 116352265 116352593 + Gm22667 misc_RNA misc_RNA MGP_BALBcJ_T0012492.1 MGP_BALBcJ_G0010589.1 mouse_genomes_project 11 18321517 18321697 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009711.1 MGP_BALBcJ_G0007836.1 mouse_genomes_project 11 95101448 95101558 + Mir10a miRNA miRNA MGP_BALBcJ_T0030016.1 MGP_BALBcJ_G0018496.1 mouse_genomes_project 11 67951915 67953937 - MGP_BALBcJ_P0030016 Tmem102 protein_coding protein_coding MGP_BALBcJ_T0033089.1 MGP_BALBcJ_G0019261.1 mouse_genomes_project 11 106262432 106536510 - MGP_BALBcJ_P0033089 Pitpnc1 protein_coding protein_coding MGP_BALBcJ_T0033090.1 MGP_BALBcJ_G0019261.1 mouse_genomes_project 11 106262432 106398670 - MGP_BALBcJ_P0033090 Pitpnc1 protein_coding protein_coding MGP_BALBcJ_T0033091.1 MGP_BALBcJ_G0019261.1 mouse_genomes_project 11 106280790 106410020 - MGP_BALBcJ_P0033091 Pitpnc1 protein_coding protein_coding MGP_BALBcJ_T0033092.1 MGP_BALBcJ_G0019261.1 mouse_genomes_project 11 106381661 106398559 - Pitpnc1 protein_coding processed_transcript MGP_BALBcJ_T0029227.1 MGP_BALBcJ_G0018306.1 mouse_genomes_project 11 56482207 56495539 + MGP_BALBcJ_P0029227 Trim58 protein_coding protein_coding MGP_BALBcJ_T0009752.1 MGP_BALBcJ_G0007877.1 mouse_genomes_project 11 119606044 119606098 - Mir6935 miRNA miRNA MGP_BALBcJ_T0102143.1 MGP_BALBcJ_G0039960.1 mouse_genomes_project 11 71855042 71859076 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012555.1 MGP_BALBcJ_G0010652.1 mouse_genomes_project 11 41844805 41845808 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032155.1 MGP_BALBcJ_G0019021.1 mouse_genomes_project 11 97837182 97838019 - MGP_BALBcJ_P0032155 Gjd3 protein_coding protein_coding MGP_BALBcJ_T0012444.1 MGP_BALBcJ_G0010541.1 mouse_genomes_project 11 3429499 3429888 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006264.1 MGP_BALBcJ_G0005232.1 mouse_genomes_project 11 80422179 80425543 + Gm11419 lincRNA lincRNA MGP_BALBcJ_T0003114.1 MGP_BALBcJ_G0002891.1 mouse_genomes_project 11 16010400 16012012 + Gm16141 antisense antisense MGP_BALBcJ_T0006346.1 MGP_BALBcJ_G0005290.1 mouse_genomes_project 11 116757858 116766401 + Gm11734 lincRNA lincRNA MGP_BALBcJ_T0028900.1 MGP_BALBcJ_G0018211.1 mouse_genomes_project 11 49255315 49267243 - MGP_BALBcJ_P0028900 Rmnd5b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028901.1 MGP_BALBcJ_G0018211.1 mouse_genomes_project 11 49255317 49267492 - MGP_BALBcJ_P0028901 Rmnd5b protein_coding protein_coding MGP_BALBcJ_T0028902.1 MGP_BALBcJ_G0018211.1 mouse_genomes_project 11 49255683 49257479 - MGP_BALBcJ_P0028902 Rmnd5b protein_coding protein_coding MGP_BALBcJ_T0028903.1 MGP_BALBcJ_G0018211.1 mouse_genomes_project 11 49260960 49267349 - Rmnd5b protein_coding processed_transcript MGP_BALBcJ_T0003283.1 MGP_BALBcJ_G0003030.1 mouse_genomes_project 11 100947766 100955921 + 4930417O22Rik antisense antisense MGP_BALBcJ_T0032199.1 MGP_BALBcJ_G0019039.1 mouse_genomes_project 11 98431890 98432626 - MGP_BALBcJ_P0032199 protein_coding protein_coding MGP_BALBcJ_T0032144.1 MGP_BALBcJ_G0019019.1 mouse_genomes_project 11 97761556 97777603 + MGP_BALBcJ_P0032144 Cdc6 protein_coding protein_coding MGP_BALBcJ_T0032145.1 MGP_BALBcJ_G0019019.1 mouse_genomes_project 11 97761604 97777607 + MGP_BALBcJ_P0032145 Cdc6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032146.1 MGP_BALBcJ_G0019019.1 mouse_genomes_project 11 97761906 97775560 + MGP_BALBcJ_P0032146 Cdc6 protein_coding protein_coding MGP_BALBcJ_T0032147.1 MGP_BALBcJ_G0019019.1 mouse_genomes_project 11 97774132 97775128 + Cdc6 protein_coding retained_intron MGP_BALBcJ_T0027869.1 MGP_BALBcJ_G0017946.1 mouse_genomes_project 11 2670235 2700033 - MGP_BALBcJ_P0027869 Urgcp protein_coding protein_coding MGP_BALBcJ_T0027870.1 MGP_BALBcJ_G0017946.1 mouse_genomes_project 11 2673296 2700069 - MGP_BALBcJ_P0027870 Urgcp protein_coding protein_coding MGP_BALBcJ_T0003285.1 MGP_BALBcJ_G0003032.1 mouse_genomes_project 11 101026382 101031216 - E130111B04Rik antisense antisense MGP_BALBcJ_T0102163.1 MGP_BALBcJ_G0039980.1 mouse_genomes_project 11 98616783 98616920 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098464.1 MGP_BALBcJ_G0036518.1 mouse_genomes_project 11 84334288 84334404 + Gm23473 rRNA rRNA MGP_BALBcJ_T0033878.1 MGP_BALBcJ_G0019424.1 mouse_genomes_project 11 118612870 118640479 + MGP_BALBcJ_P0033878 Slc26a11 protein_coding protein_coding MGP_BALBcJ_T0033879.1 MGP_BALBcJ_G0019424.1 mouse_genomes_project 11 118612901 118620283 + Slc26a11 protein_coding processed_transcript MGP_BALBcJ_T0033880.1 MGP_BALBcJ_G0019424.1 mouse_genomes_project 11 118612906 118629006 + Slc26a11 protein_coding processed_transcript MGP_BALBcJ_T0033881.1 MGP_BALBcJ_G0019424.1 mouse_genomes_project 11 118620676 118640449 + Slc26a11 protein_coding processed_transcript MGP_BALBcJ_T0009708.1 MGP_BALBcJ_G0007833.1 mouse_genomes_project 11 90703703 90703772 - Gm22702 miRNA miRNA MGP_BALBcJ_T0011275.1 MGP_BALBcJ_G0009400.1 mouse_genomes_project 11 40218562 40218874 + Gm25543 misc_RNA misc_RNA MGP_BALBcJ_T0029030.1 MGP_BALBcJ_G0018246.1 mouse_genomes_project 11 51546076 51559091 - Gm12216 protein_coding processed_transcript MGP_BALBcJ_T0029031.1 MGP_BALBcJ_G0018246.1 mouse_genomes_project 11 51546949 51626114 - Gm12216 protein_coding processed_transcript MGP_BALBcJ_T0029032.1 MGP_BALBcJ_G0018246.1 mouse_genomes_project 11 51548822 51626226 - MGP_BALBcJ_P0029032 Gm12216 protein_coding protein_coding MGP_BALBcJ_T0029033.1 MGP_BALBcJ_G0018246.1 mouse_genomes_project 11 51566900 51626199 - Gm12216 protein_coding processed_transcript MGP_BALBcJ_T0029034.1 MGP_BALBcJ_G0018246.1 mouse_genomes_project 11 51572424 51626226 - MGP_BALBcJ_P0029034 Gm12216 protein_coding protein_coding MGP_BALBcJ_T0029035.1 MGP_BALBcJ_G0018246.1 mouse_genomes_project 11 51576126 51626226 - MGP_BALBcJ_P0029035 Gm12216 protein_coding protein_coding MGP_BALBcJ_T0012537.1 MGP_BALBcJ_G0010634.1 mouse_genomes_project 11 30705422 30705954 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033798.1 MGP_BALBcJ_G0019408.1 mouse_genomes_project 11 117580385 117590278 - MGP_BALBcJ_P0033798 BC100451 protein_coding protein_coding MGP_BALBcJ_T0033799.1 MGP_BALBcJ_G0019408.1 mouse_genomes_project 11 117580440 117582042 - MGP_BALBcJ_P0033799 BC100451 protein_coding protein_coding MGP_BALBcJ_T0027858.1 MGP_BALBcJ_G0017943.1 mouse_genomes_project 11 2487682 2501101 - MGP_BALBcJ_P0027858 Ccdc117 protein_coding protein_coding MGP_BALBcJ_T0012695.1 MGP_BALBcJ_G0010792.1 mouse_genomes_project 11 91430925 91432847 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027894.1 MGP_BALBcJ_G0017954.1 mouse_genomes_project 11 2916876 2928910 + MGP_BALBcJ_P0027894 Ykt6 protein_coding protein_coding MGP_BALBcJ_T0027895.1 MGP_BALBcJ_G0017954.1 mouse_genomes_project 11 2920423 2924331 + Ykt6 protein_coding processed_transcript MGP_BALBcJ_T0033367.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636282 114638616 - Atp5h protein_coding processed_transcript MGP_BALBcJ_T0033368.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636282 114637612 - Atp5h protein_coding processed_transcript MGP_BALBcJ_T0033369.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636282 114640551 - MGP_BALBcJ_P0033369 Atp5h protein_coding protein_coding MGP_BALBcJ_T0033370.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636282 114640506 - MGP_BALBcJ_P0033370 Atp5h protein_coding protein_coding MGP_BALBcJ_T0033371.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636282 114640551 - MGP_BALBcJ_P0033371 Atp5h protein_coding protein_coding MGP_BALBcJ_T0033372.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636341 114639101 - MGP_BALBcJ_P0033372 Atp5h protein_coding protein_coding MGP_BALBcJ_T0033373.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114636411 114639335 - MGP_BALBcJ_P0033373 Atp5h protein_coding protein_coding MGP_BALBcJ_T0033374.1 MGP_BALBcJ_G0019328.1 mouse_genomes_project 11 114637446 114639667 - Atp5h protein_coding processed_transcript MGP_BALBcJ_T0003138.1 MGP_BALBcJ_G0002914.1 mouse_genomes_project 11 48422021 48423272 - Gm12660 antisense antisense MGP_BALBcJ_T0006246.1 MGP_BALBcJ_G0005220.1 mouse_genomes_project 11 69923937 69925007 - Gm12326 lincRNA lincRNA MGP_BALBcJ_T0006247.1 MGP_BALBcJ_G0005220.1 mouse_genomes_project 11 69924551 69924988 - Gm12326 lincRNA lincRNA MGP_BALBcJ_T0098468.1 MGP_BALBcJ_G0036522.1 mouse_genomes_project 11 106932978 106933090 + Gm27595 rRNA rRNA MGP_BALBcJ_T0012603.1 MGP_BALBcJ_G0010700.1 mouse_genomes_project 11 57404415 57404720 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029922.1 MGP_BALBcJ_G0018473.1 mouse_genomes_project 11 67517050 67518765 - MGP_BALBcJ_P0029922 Tmem88 protein_coding protein_coding MGP_BALBcJ_T0029269.1 MGP_BALBcJ_G0018328.1 mouse_genomes_project 11 57070629 57079722 - MGP_BALBcJ_P0029269 Iba57 protein_coding protein_coding MGP_BALBcJ_T0029270.1 MGP_BALBcJ_G0018328.1 mouse_genomes_project 11 57077103 57079300 - MGP_BALBcJ_P0029270 Iba57 protein_coding protein_coding MGP_BALBcJ_T0029271.1 MGP_BALBcJ_G0018328.1 mouse_genomes_project 11 57077335 57079683 - MGP_BALBcJ_P0029271 Iba57 protein_coding protein_coding MGP_BALBcJ_T0009695.1 MGP_BALBcJ_G0007820.1 mouse_genomes_project 11 76425603 76425675 + Mir451a miRNA miRNA MGP_BALBcJ_T0027703.1 MGP_BALBcJ_G0017911.1 mouse_genomes_project 11 885974 901403 + MGP_BALBcJ_P0027703 Gal3st1 protein_coding protein_coding MGP_BALBcJ_T0027704.1 MGP_BALBcJ_G0017911.1 mouse_genomes_project 11 886051 901392 + MGP_BALBcJ_P0027704 Gal3st1 protein_coding protein_coding MGP_BALBcJ_T0027705.1 MGP_BALBcJ_G0017911.1 mouse_genomes_project 11 892269 901385 + MGP_BALBcJ_P0027705 Gal3st1 protein_coding protein_coding MGP_BALBcJ_T0003099.1 MGP_BALBcJ_G0002882.1 mouse_genomes_project 11 3449886 3465476 + Gm11973 antisense antisense MGP_BALBcJ_T0003100.1 MGP_BALBcJ_G0002882.1 mouse_genomes_project 11 3449926 3468610 + Gm11973 antisense antisense MGP_BALBcJ_T0003101.1 MGP_BALBcJ_G0002882.1 mouse_genomes_project 11 3449938 3468610 + Gm11973 antisense antisense MGP_BALBcJ_T0032462.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100242146 100256137 - Becn1 protein_coding retained_intron MGP_BALBcJ_T0032463.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100242146 100256145 - Becn1 protein_coding retained_intron MGP_BALBcJ_T0032464.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100242146 100256171 - MGP_BALBcJ_P0032464 Becn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032465.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100242148 100256159 - MGP_BALBcJ_P0032465 Becn1 protein_coding protein_coding MGP_BALBcJ_T0032466.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100242760 100256122 - MGP_BALBcJ_P0032466 Becn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032467.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100242772 100247926 - Becn1 protein_coding retained_intron MGP_BALBcJ_T0032468.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100243764 100246383 - Becn1 protein_coding processed_transcript MGP_BALBcJ_T0032469.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100244368 100255622 - MGP_BALBcJ_P0032469 Becn1 protein_coding protein_coding MGP_BALBcJ_T0032470.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100245267 100250192 - MGP_BALBcJ_P0032470 Becn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032471.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100245383 100256123 - MGP_BALBcJ_P0032471 Becn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032472.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100245414 100249321 - Becn1 protein_coding retained_intron MGP_BALBcJ_T0032473.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100249431 100256091 - MGP_BALBcJ_P0032473 Becn1 protein_coding protein_coding MGP_BALBcJ_T0032474.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100249791 100256134 - MGP_BALBcJ_P0032474 Becn1 protein_coding protein_coding MGP_BALBcJ_T0032475.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100250110 100256125 - Becn1 protein_coding retained_intron MGP_BALBcJ_T0032476.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100251961 100256140 - Becn1 protein_coding processed_transcript MGP_BALBcJ_T0032477.1 MGP_BALBcJ_G0019135.1 mouse_genomes_project 11 100255345 100256126 - Becn1 protein_coding retained_intron MGP_BALBcJ_T0029863.1 MGP_BALBcJ_G0018458.1 mouse_genomes_project 11 67208290 67219486 + MGP_BALBcJ_P0029863 Per1 protein_coding protein_coding MGP_BALBcJ_T0029864.1 MGP_BALBcJ_G0018458.1 mouse_genomes_project 11 67211972 67222989 + MGP_BALBcJ_P0029864 Per1 protein_coding protein_coding MGP_BALBcJ_T0029865.1 MGP_BALBcJ_G0018458.1 mouse_genomes_project 11 67213176 67214073 + MGP_BALBcJ_P0029865 Per1 protein_coding protein_coding MGP_BALBcJ_T0029866.1 MGP_BALBcJ_G0018458.1 mouse_genomes_project 11 67213182 67222977 + MGP_BALBcJ_P0029866 Per1 protein_coding protein_coding MGP_BALBcJ_T0029867.1 MGP_BALBcJ_G0018458.1 mouse_genomes_project 11 67213533 67219324 + MGP_BALBcJ_P0029867 Per1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029868.1 MGP_BALBcJ_G0018458.1 mouse_genomes_project 11 67213546 67222989 + MGP_BALBcJ_P0029868 Per1 protein_coding protein_coding MGP_BALBcJ_T0031827.1 MGP_BALBcJ_G0018944.1 mouse_genomes_project 11 95070986 95074498 + MGP_BALBcJ_P0031827 Hoxb7 protein_coding protein_coding MGP_BALBcJ_T0031828.1 MGP_BALBcJ_G0018944.1 mouse_genomes_project 11 95073076 95073829 + Hoxb7 protein_coding processed_transcript MGP_BALBcJ_T0030541.1 MGP_BALBcJ_G0018624.1 mouse_genomes_project 11 72290832 72306719 + MGP_BALBcJ_P0030541 protein_coding protein_coding MGP_BALBcJ_T0030542.1 MGP_BALBcJ_G0018624.1 mouse_genomes_project 11 72290832 72303337 + MGP_BALBcJ_P0030542 protein_coding protein_coding MGP_BALBcJ_T0030543.1 MGP_BALBcJ_G0018624.1 mouse_genomes_project 11 72291042 72302558 + protein_coding processed_transcript MGP_BALBcJ_T0030544.1 MGP_BALBcJ_G0018624.1 mouse_genomes_project 11 72291062 72302286 + MGP_BALBcJ_P0030544 protein_coding protein_coding MGP_BALBcJ_T0009677.1 MGP_BALBcJ_G0007802.1 mouse_genomes_project 11 68389323 68389448 - Mir497b miRNA miRNA MGP_BALBcJ_T0031646.1 MGP_BALBcJ_G0018896.1 mouse_genomes_project 11 93021469 93073812 - MGP_BALBcJ_P0031646 Abcc3 protein_coding protein_coding MGP_BALBcJ_T0031647.1 MGP_BALBcJ_G0018896.1 mouse_genomes_project 11 93021472 93073812 - MGP_BALBcJ_P0031647 Abcc3 protein_coding protein_coding MGP_BALBcJ_T0031648.1 MGP_BALBcJ_G0018896.1 mouse_genomes_project 11 93021829 93029621 - Abcc3 protein_coding processed_transcript MGP_BALBcJ_T0031649.1 MGP_BALBcJ_G0018896.1 mouse_genomes_project 11 93042621 93046660 - Abcc3 protein_coding processed_transcript MGP_BALBcJ_T0031650.1 MGP_BALBcJ_G0018896.1 mouse_genomes_project 11 93043266 93073755 - Abcc3 protein_coding processed_transcript MGP_BALBcJ_T0031651.1 MGP_BALBcJ_G0018896.1 mouse_genomes_project 11 93053387 93073833 - Abcc3 protein_coding processed_transcript MGP_BALBcJ_T0012728.1 MGP_BALBcJ_G0010825.1 mouse_genomes_project 11 102600714 102601578 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012497.1 MGP_BALBcJ_G0010594.1 mouse_genomes_project 11 18740556 18741207 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012538.1 MGP_BALBcJ_G0010635.1 mouse_genomes_project 11 32610507 32610979 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028169.1 MGP_BALBcJ_G0018019.1 mouse_genomes_project 11 19817050 19919672 - MGP_BALBcJ_P0028169 Gm12057 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003325.1 MGP_BALBcJ_G0003066.1 mouse_genomes_project 11 115190306 115195963 - Sap30bpos antisense antisense MGP_BALBcJ_T0027681.1 MGP_BALBcJ_G0017904.1 mouse_genomes_project 11 595947 761305 - MGP_BALBcJ_P0027681 Osbp2 protein_coding protein_coding MGP_BALBcJ_T0027682.1 MGP_BALBcJ_G0017904.1 mouse_genomes_project 11 595949 761155 - MGP_BALBcJ_P0027682 Osbp2 protein_coding protein_coding MGP_BALBcJ_T0027683.1 MGP_BALBcJ_G0017904.1 mouse_genomes_project 11 596134 614726 - MGP_BALBcJ_P0027683 Osbp2 protein_coding protein_coding MGP_BALBcJ_T0027684.1 MGP_BALBcJ_G0017904.1 mouse_genomes_project 11 610362 666210 - MGP_BALBcJ_P0027684 Osbp2 protein_coding protein_coding MGP_BALBcJ_T0027685.1 MGP_BALBcJ_G0017904.1 mouse_genomes_project 11 610422 667163 - MGP_BALBcJ_P0027685 Osbp2 protein_coding protein_coding MGP_BALBcJ_T0027686.1 MGP_BALBcJ_G0017904.1 mouse_genomes_project 11 616911 761305 - Osbp2 protein_coding processed_transcript MGP_BALBcJ_T0032907.1 MGP_BALBcJ_G0019222.1 mouse_genomes_project 11 103941422 104135706 + MGP_BALBcJ_P0032907 Efcab3 protein_coding unknown_likely_coding MGP_BALBcJ_T0032908.1 MGP_BALBcJ_G0019222.1 mouse_genomes_project 11 104074494 104105446 + MGP_BALBcJ_P0032908 Efcab3 protein_coding protein_coding MGP_BALBcJ_T0032909.1 MGP_BALBcJ_G0019222.1 mouse_genomes_project 11 104077727 104123266 + MGP_BALBcJ_P0032909 Efcab3 protein_coding protein_coding MGP_BALBcJ_T0032910.1 MGP_BALBcJ_G0019222.1 mouse_genomes_project 11 104108575 104135849 + MGP_BALBcJ_P0032910 Efcab3 protein_coding protein_coding MGP_BALBcJ_T0032911.1 MGP_BALBcJ_G0019222.1 mouse_genomes_project 11 104129465 104135847 + Efcab3 protein_coding processed_transcript MGP_BALBcJ_T0032218.1 MGP_BALBcJ_G0019058.1 mouse_genomes_project 11 98691047 98692098 + MGP_BALBcJ_P0032218 Krtap4-9 protein_coding protein_coding MGP_BALBcJ_T0029406.1 MGP_BALBcJ_G0018360.1 mouse_genomes_project 11 58482532 58500698 + Alkbh5 protein_coding processed_transcript MGP_BALBcJ_T0029407.1 MGP_BALBcJ_G0018360.1 mouse_genomes_project 11 58484129 58504840 + MGP_BALBcJ_P0029407 Alkbh5 protein_coding protein_coding MGP_BALBcJ_T0030484.1 MGP_BALBcJ_G0018596.1 mouse_genomes_project 11 71393286 71409418 - MGP_BALBcJ_P0030484 Ctns protein_coding protein_coding MGP_BALBcJ_T0030485.1 MGP_BALBcJ_G0018596.1 mouse_genomes_project 11 71393287 71409418 - MGP_BALBcJ_P0030485 Ctns protein_coding protein_coding MGP_BALBcJ_T0030486.1 MGP_BALBcJ_G0018596.1 mouse_genomes_project 11 71396042 71398497 - Ctns protein_coding retained_intron MGP_BALBcJ_T0030487.1 MGP_BALBcJ_G0018596.1 mouse_genomes_project 11 71401002 71409397 - Ctns protein_coding retained_intron MGP_BALBcJ_T0030488.1 MGP_BALBcJ_G0018596.1 mouse_genomes_project 11 71401404 71409371 - Ctns protein_coding processed_transcript MGP_BALBcJ_T0032204.1 MGP_BALBcJ_G0019044.1 mouse_genomes_project 11 98464679 98465272 - MGP_BALBcJ_P0032204 Krtap1-4 protein_coding protein_coding MGP_BALBcJ_T0028203.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20373249 20559837 + MGP_BALBcJ_P0028203 Usp34 protein_coding protein_coding MGP_BALBcJ_T0028204.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20373270 20559021 + MGP_BALBcJ_P0028204 Usp34 protein_coding protein_coding MGP_BALBcJ_T0028205.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20484143 20490043 + Usp34 protein_coding processed_transcript MGP_BALBcJ_T0028206.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20489445 20525831 + MGP_BALBcJ_P0028206 Usp34 protein_coding protein_coding MGP_BALBcJ_T0028207.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20527082 20530049 + Usp34 protein_coding processed_transcript MGP_BALBcJ_T0028208.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20527221 20529763 + Usp34 protein_coding processed_transcript MGP_BALBcJ_T0028209.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20539572 20557645 + MGP_BALBcJ_P0028209 Usp34 protein_coding protein_coding MGP_BALBcJ_T0028210.1 MGP_BALBcJ_G0018027.1 mouse_genomes_project 11 20556081 20556600 + Usp34 protein_coding processed_transcript MGP_BALBcJ_T0012754.1 MGP_BALBcJ_G0010851.1 mouse_genomes_project 11 114107522 114107977 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102164.1 MGP_BALBcJ_G0039981.1 mouse_genomes_project 11 98811603 98811806 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0033216.1 MGP_BALBcJ_G0019290.1 mouse_genomes_project 11 111926680 111932214 + MGP_BALBcJ_P0033216 Sox9 protein_coding protein_coding MGP_BALBcJ_T0006324.1 MGP_BALBcJ_G0005276.1 mouse_genomes_project 11 111971069 111972126 + 4933434M16Rik lincRNA lincRNA MGP_BALBcJ_T0006325.1 MGP_BALBcJ_G0005276.1 mouse_genomes_project 11 111971094 111978318 + 4933434M16Rik lincRNA lincRNA MGP_BALBcJ_T0028529.1 MGP_BALBcJ_G0018106.1 mouse_genomes_project 11 39225363 39316168 - MGP_BALBcJ_P0028529 Gabrg2 protein_coding protein_coding MGP_BALBcJ_T0028530.1 MGP_BALBcJ_G0018106.1 mouse_genomes_project 11 39226853 39315842 - MGP_BALBcJ_P0028530 Gabrg2 protein_coding protein_coding MGP_BALBcJ_T0028531.1 MGP_BALBcJ_G0018106.1 mouse_genomes_project 11 39226855 39231758 - Gabrg2 protein_coding retained_intron MGP_BALBcJ_T0028532.1 MGP_BALBcJ_G0018106.1 mouse_genomes_project 11 39229704 39315666 - MGP_BALBcJ_P0028532 Gabrg2 protein_coding protein_coding MGP_BALBcJ_T0102153.1 MGP_BALBcJ_G0039970.1 mouse_genomes_project 11 82225906 82226817 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031511.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86721128 86723177 + Cuedc1 protein_coding processed_transcript MGP_BALBcJ_T0031512.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86722214 86816697 + MGP_BALBcJ_P0031512 Cuedc1 protein_coding protein_coding MGP_BALBcJ_T0031513.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86722358 86808321 + Cuedc1 protein_coding retained_intron MGP_BALBcJ_T0031514.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86786756 86816697 + MGP_BALBcJ_P0031514 Cuedc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031515.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86805265 86806243 + Cuedc1 protein_coding retained_intron MGP_BALBcJ_T0031516.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86808786 86811621 + Cuedc1 protein_coding processed_transcript MGP_BALBcJ_T0031517.1 MGP_BALBcJ_G0018862.1 mouse_genomes_project 11 86810621 86815564 + Cuedc1 protein_coding retained_intron MGP_BALBcJ_T0100520.1 MGP_BALBcJ_G0038556.1 mouse_genomes_project 11 67795373 67795517 - Gm22988 snoRNA snoRNA MGP_BALBcJ_T0030926.1 MGP_BALBcJ_G0018709.1 mouse_genomes_project 11 76561389 76573349 + MGP_BALBcJ_P0030926 Proca1 protein_coding protein_coding MGP_BALBcJ_T0030927.1 MGP_BALBcJ_G0018709.1 mouse_genomes_project 11 76562701 76573312 + MGP_BALBcJ_P0030927 Proca1 protein_coding protein_coding MGP_BALBcJ_T0030928.1 MGP_BALBcJ_G0018709.1 mouse_genomes_project 11 76562731 76573608 + MGP_BALBcJ_P0030928 Proca1 protein_coding protein_coding MGP_BALBcJ_T0030929.1 MGP_BALBcJ_G0018709.1 mouse_genomes_project 11 76572271 76572936 + Proca1 protein_coding processed_transcript MGP_BALBcJ_T0029225.1 MGP_BALBcJ_G0018305.1 mouse_genomes_project 11 56466854 56467826 - MGP_BALBcJ_P0029225 Olfr323 protein_coding protein_coding MGP_BALBcJ_T0029226.1 MGP_BALBcJ_G0018305.1 mouse_genomes_project 11 56466854 56467823 - MGP_BALBcJ_P0029226 Olfr323 protein_coding protein_coding MGP_BALBcJ_T0032457.1 MGP_BALBcJ_G0019133.1 mouse_genomes_project 11 100231906 100233053 - MGP_BALBcJ_P0032457 Coa3 protein_coding protein_coding MGP_BALBcJ_T0032458.1 MGP_BALBcJ_G0019133.1 mouse_genomes_project 11 100232276 100232882 - MGP_BALBcJ_P0032458 Coa3 protein_coding protein_coding MGP_BALBcJ_T0028573.1 MGP_BALBcJ_G0018116.1 mouse_genomes_project 11 40922001 40924001 + MGP_BALBcJ_P0028573 4933415A04Rik protein_coding protein_coding MGP_BALBcJ_T0027932.1 MGP_BALBcJ_G0017962.1 mouse_genomes_project 11 3362324 3379388 + MGP_BALBcJ_P0027932 Zmiz2 protein_coding protein_coding MGP_BALBcJ_T0027933.1 MGP_BALBcJ_G0017962.1 mouse_genomes_project 11 3362614 3379388 + MGP_BALBcJ_P0027933 Zmiz2 protein_coding protein_coding MGP_BALBcJ_T0027934.1 MGP_BALBcJ_G0017962.1 mouse_genomes_project 11 3362721 3379388 + MGP_BALBcJ_P0027934 Zmiz2 protein_coding protein_coding MGP_BALBcJ_T0027935.1 MGP_BALBcJ_G0017962.1 mouse_genomes_project 11 3368422 3379304 + MGP_BALBcJ_P0027935 Zmiz2 protein_coding protein_coding MGP_BALBcJ_T0027936.1 MGP_BALBcJ_G0017962.1 mouse_genomes_project 11 3368839 3379160 + MGP_BALBcJ_P0027936 Zmiz2 protein_coding protein_coding MGP_BALBcJ_T0027937.1 MGP_BALBcJ_G0017962.1 mouse_genomes_project 11 3369963 3371083 + Zmiz2 protein_coding retained_intron MGP_BALBcJ_T0032209.1 MGP_BALBcJ_G0019049.1 mouse_genomes_project 11 98515396 98516361 - MGP_BALBcJ_P0032209 protein_coding protein_coding MGP_BALBcJ_T0031852.1 MGP_BALBcJ_G0018952.1 mouse_genomes_project 11 95555686 95565658 - MGP_BALBcJ_P0031852 Snx11 protein_coding protein_coding MGP_BALBcJ_T0031853.1 MGP_BALBcJ_G0018952.1 mouse_genomes_project 11 95556008 95565686 - MGP_BALBcJ_P0031853 Snx11 protein_coding protein_coding MGP_BALBcJ_T0031854.1 MGP_BALBcJ_G0018952.1 mouse_genomes_project 11 95558022 95565619 - MGP_BALBcJ_P0031854 Snx11 protein_coding protein_coding MGP_BALBcJ_T0031855.1 MGP_BALBcJ_G0018952.1 mouse_genomes_project 11 95558229 95559182 - Snx11 protein_coding processed_transcript MGP_BALBcJ_T0031856.1 MGP_BALBcJ_G0018952.1 mouse_genomes_project 11 95560668 95562769 - Snx11 protein_coding processed_transcript MGP_BALBcJ_T0031857.1 MGP_BALBcJ_G0018952.1 mouse_genomes_project 11 95564426 95565647 - Snx11 protein_coding processed_transcript MGP_BALBcJ_T0006200.1 MGP_BALBcJ_G0005181.1 mouse_genomes_project 11 41951860 41956662 + 4930597A21Rik lincRNA lincRNA MGP_BALBcJ_T0032543.1 MGP_BALBcJ_G0019151.1 mouse_genomes_project 11 100610964 100615088 + Rdm1 protein_coding processed_transcript MGP_BALBcJ_T0032544.1 MGP_BALBcJ_G0019151.1 mouse_genomes_project 11 100612180 100620322 + MGP_BALBcJ_P0032544 Rdm1 protein_coding protein_coding MGP_BALBcJ_T0032545.1 MGP_BALBcJ_G0019151.1 mouse_genomes_project 11 100612210 100618031 + Rdm1 protein_coding processed_transcript MGP_BALBcJ_T0032546.1 MGP_BALBcJ_G0019151.1 mouse_genomes_project 11 100612627 100620294 + MGP_BALBcJ_P0032546 Rdm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032547.1 MGP_BALBcJ_G0019151.1 mouse_genomes_project 11 100617935 100620182 + Rdm1 protein_coding retained_intron MGP_BALBcJ_T0099300.1 MGP_BALBcJ_G0037336.1 mouse_genomes_project 11 105811504 105811611 - Gm25889 snRNA snRNA MGP_BALBcJ_T0033240.1 MGP_BALBcJ_G0019295.1 mouse_genomes_project 11 112874840 112887948 - MGP_BALBcJ_P0033240 Cpsf4l protein_coding protein_coding MGP_BALBcJ_T0033241.1 MGP_BALBcJ_G0019295.1 mouse_genomes_project 11 112874840 112887457 - MGP_BALBcJ_P0033241 Cpsf4l protein_coding protein_coding MGP_BALBcJ_T0033242.1 MGP_BALBcJ_G0019295.1 mouse_genomes_project 11 112874840 112886898 - MGP_BALBcJ_P0033242 Cpsf4l protein_coding protein_coding MGP_BALBcJ_T0033243.1 MGP_BALBcJ_G0019295.1 mouse_genomes_project 11 112874840 112887451 - MGP_BALBcJ_P0033243 Cpsf4l protein_coding protein_coding MGP_BALBcJ_T0033244.1 MGP_BALBcJ_G0019295.1 mouse_genomes_project 11 112879374 112887455 - Cpsf4l protein_coding retained_intron MGP_BALBcJ_T0032828.1 MGP_BALBcJ_G0019203.1 mouse_genomes_project 11 102235255 102283210 - MGP_BALBcJ_P0032828 Map3k14 protein_coding protein_coding MGP_BALBcJ_T0032829.1 MGP_BALBcJ_G0019203.1 mouse_genomes_project 11 102236298 102237341 - Map3k14 protein_coding processed_transcript MGP_BALBcJ_T0032830.1 MGP_BALBcJ_G0019203.1 mouse_genomes_project 11 102252487 102257729 - Map3k14 protein_coding processed_transcript MGP_BALBcJ_T0032831.1 MGP_BALBcJ_G0019203.1 mouse_genomes_project 11 102254791 102255592 - Map3k14 protein_coding processed_transcript MGP_BALBcJ_T0029638.1 MGP_BALBcJ_G0018404.1 mouse_genomes_project 11 60871526 60902383 + MGP_BALBcJ_P0029638 Fbxw10 protein_coding protein_coding MGP_BALBcJ_T0029639.1 MGP_BALBcJ_G0018404.1 mouse_genomes_project 11 60871580 60902380 + MGP_BALBcJ_P0029639 Fbxw10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029640.1 MGP_BALBcJ_G0018404.1 mouse_genomes_project 11 60871580 60902380 + MGP_BALBcJ_P0029640 Fbxw10 protein_coding protein_coding MGP_BALBcJ_T0029641.1 MGP_BALBcJ_G0018404.1 mouse_genomes_project 11 60871585 60876062 + Fbxw10 protein_coding retained_intron MGP_BALBcJ_T0029642.1 MGP_BALBcJ_G0018404.1 mouse_genomes_project 11 60871589 60902361 + MGP_BALBcJ_P0029642 Fbxw10 protein_coding protein_coding MGP_BALBcJ_T0029643.1 MGP_BALBcJ_G0018404.1 mouse_genomes_project 11 60899776 60901671 + Fbxw10 protein_coding processed_transcript MGP_BALBcJ_T0028477.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31507599 32067248 - MGP_BALBcJ_P0028477 Dock2 protein_coding protein_coding MGP_BALBcJ_T0028478.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31512069 31513187 - Dock2 protein_coding retained_intron MGP_BALBcJ_T0028479.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31554978 32067248 - MGP_BALBcJ_P0028479 Dock2 protein_coding protein_coding MGP_BALBcJ_T0028480.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31589978 31594966 - Dock2 protein_coding retained_intron MGP_BALBcJ_T0028483.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31644352 31973699 - MGP_BALBcJ_P0028483 Dock2 protein_coding protein_coding MGP_BALBcJ_T0028484.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31720610 32067239 - Dock2 protein_coding retained_intron MGP_BALBcJ_T0028485.1 MGP_BALBcJ_G0018093.1 mouse_genomes_project 11 31720610 32067248 - MGP_BALBcJ_P0028485 Dock2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006318.1 MGP_BALBcJ_G0005270.1 mouse_genomes_project 11 108720869 108746445 + Gm11685 lincRNA lincRNA MGP_BALBcJ_T0003246.1 MGP_BALBcJ_G0003001.1 mouse_genomes_project 11 93876726 93890768 + Dlx4os antisense antisense MGP_BALBcJ_T0098457.1 MGP_BALBcJ_G0036511.1 mouse_genomes_project 11 48380688 48380801 + Gm23392 rRNA rRNA MGP_BALBcJ_T0099288.1 MGP_BALBcJ_G0037324.1 mouse_genomes_project 11 97314112 97314246 - Gm25106 snRNA snRNA MGP_BALBcJ_T0031900.1 MGP_BALBcJ_G0018961.1 mouse_genomes_project 11 95826858 95830879 + MGP_BALBcJ_P0031900 Scrn2 protein_coding protein_coding MGP_BALBcJ_T0031901.1 MGP_BALBcJ_G0018961.1 mouse_genomes_project 11 95826872 95828127 + Scrn2 protein_coding retained_intron MGP_BALBcJ_T0031902.1 MGP_BALBcJ_G0018961.1 mouse_genomes_project 11 95826921 95830871 + Scrn2 protein_coding retained_intron MGP_BALBcJ_T0031903.1 MGP_BALBcJ_G0018961.1 mouse_genomes_project 11 95827054 95829197 + MGP_BALBcJ_P0031903 Scrn2 protein_coding protein_coding MGP_BALBcJ_T0028649.1 MGP_BALBcJ_G0018138.1 mouse_genomes_project 11 43892977 43910512 + MGP_BALBcJ_P0028649 BC053393 protein_coding protein_coding MGP_BALBcJ_T0009731.1 MGP_BALBcJ_G0007856.1 mouse_genomes_project 11 103259027 103259098 - miRNA miRNA MGP_BALBcJ_T0011778.1 MGP_BALBcJ_G0009900.1 mouse_genomes_project 11 71948132 71949195 - MGP_BALBcJ_P0011778 Olfr388-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0102157.1 MGP_BALBcJ_G0039974.1 mouse_genomes_project 11 93462133 93462873 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101616.1 MGP_BALBcJ_G0039632.1 mouse_genomes_project 11 106599964 106600339 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0011290.1 MGP_BALBcJ_G0009415.1 mouse_genomes_project 11 94970279 94970415 - Gm27605 misc_RNA misc_RNA MGP_BALBcJ_T0032194.1 MGP_BALBcJ_G0019036.1 mouse_genomes_project 11 98357484 98372578 - MGP_BALBcJ_P0032194 Krt23 protein_coding protein_coding MGP_BALBcJ_T0032187.1 MGP_BALBcJ_G0019030.1 mouse_genomes_project 11 98198703 98208047 - Krt26 protein_coding processed_transcript MGP_BALBcJ_T0032188.1 MGP_BALBcJ_G0019030.1 mouse_genomes_project 11 98198767 98208048 - MGP_BALBcJ_P0032188 Krt26 protein_coding protein_coding MGP_BALBcJ_T0003173.1 MGP_BALBcJ_G0002944.1 mouse_genomes_project 11 60496114 60515404 + Gm12278 antisense antisense MGP_BALBcJ_T0032779.1 MGP_BALBcJ_G0019193.1 mouse_genomes_project 11 101959746 101967171 - MGP_BALBcJ_P0032779 C1ql1 protein_coding protein_coding MGP_BALBcJ_T0099236.1 MGP_BALBcJ_G0037272.1 mouse_genomes_project 11 20548845 20548952 - Gm22753 snRNA snRNA MGP_BALBcJ_T0029383.1 MGP_BALBcJ_G0018355.1 mouse_genomes_project 11 58286493 58305426 + MGP_BALBcJ_P0029383 Lrrc48 protein_coding protein_coding MGP_BALBcJ_T0029384.1 MGP_BALBcJ_G0018355.1 mouse_genomes_project 11 58286493 58310605 + MGP_BALBcJ_P0029384 Lrrc48 protein_coding protein_coding MGP_BALBcJ_T0029385.1 MGP_BALBcJ_G0018355.1 mouse_genomes_project 11 58286493 58327472 + MGP_BALBcJ_P0029385 Lrrc48 protein_coding protein_coding MGP_BALBcJ_T0029386.1 MGP_BALBcJ_G0018355.1 mouse_genomes_project 11 58286521 58308466 + Lrrc48 protein_coding processed_transcript MGP_BALBcJ_T0029387.1 MGP_BALBcJ_G0018355.1 mouse_genomes_project 11 58286544 58327464 + MGP_BALBcJ_P0029387 Lrrc48 protein_coding protein_coding MGP_BALBcJ_T0012576.1 MGP_BALBcJ_G0010673.1 mouse_genomes_project 11 51259827 51260403 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033797.1 MGP_BALBcJ_G0019407.1 mouse_genomes_project 11 117548115 117602870 - MGP_BALBcJ_P0033797 Timp2 protein_coding protein_coding MGP_BALBcJ_T0100502.1 MGP_BALBcJ_G0038538.1 mouse_genomes_project 11 42992516 42992648 + Gm22284 snoRNA snoRNA MGP_BALBcJ_T0027699.1 MGP_BALBcJ_G0017909.1 mouse_genomes_project 11 836564 878975 - MGP_BALBcJ_P0027699 4930556J24Rik protein_coding protein_coding MGP_BALBcJ_T0099296.1 MGP_BALBcJ_G0037332.1 mouse_genomes_project 11 100642967 100643153 + Rnu2-10 snRNA snRNA MGP_BALBcJ_T0032270.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99297410 99301170 - Jup protein_coding processed_transcript MGP_BALBcJ_T0032271.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99299071 99326003 - MGP_BALBcJ_P0032271 Jup protein_coding protein_coding MGP_BALBcJ_T0032272.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99299511 99302579 - Jup protein_coding processed_transcript MGP_BALBcJ_T0032273.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99300749 99326003 - MGP_BALBcJ_P0032273 Jup protein_coding protein_coding MGP_BALBcJ_T0032274.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99300810 99301762 - Jup protein_coding processed_transcript MGP_BALBcJ_T0032275.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99309564 99311350 - Jup protein_coding processed_transcript MGP_BALBcJ_T0032276.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99311572 99326017 - Jup protein_coding processed_transcript MGP_BALBcJ_T0032277.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99311652 99314999 - Jup protein_coding processed_transcript MGP_BALBcJ_T0032278.1 MGP_BALBcJ_G0019094.1 mouse_genomes_project 11 99311661 99315028 - Jup protein_coding processed_transcript MGP_BALBcJ_T0102156.1 MGP_BALBcJ_G0039973.1 mouse_genomes_project 11 93439796 93440574 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031258.1 MGP_BALBcJ_G0018805.1 mouse_genomes_project 11 82583887 82605608 - MGP_BALBcJ_P0031258 Dusp14 protein_coding protein_coding MGP_BALBcJ_T0031259.1 MGP_BALBcJ_G0018805.1 mouse_genomes_project 11 82583887 82605164 - MGP_BALBcJ_P0031259 Dusp14 protein_coding protein_coding MGP_BALBcJ_T0031260.1 MGP_BALBcJ_G0018805.1 mouse_genomes_project 11 82583891 82605386 - MGP_BALBcJ_P0031260 Dusp14 protein_coding protein_coding MGP_BALBcJ_T0031261.1 MGP_BALBcJ_G0018805.1 mouse_genomes_project 11 82584260 82603887 - MGP_BALBcJ_P0031261 Dusp14 protein_coding protein_coding MGP_BALBcJ_T0031262.1 MGP_BALBcJ_G0018805.1 mouse_genomes_project 11 82584826 82606068 - MGP_BALBcJ_P0031262 Dusp14 protein_coding protein_coding MGP_BALBcJ_T0006212.1 MGP_BALBcJ_G0005191.1 mouse_genomes_project 11 49587766 49973090 - lincRNA lincRNA MGP_BALBcJ_T0028635.1 MGP_BALBcJ_G0018134.1 mouse_genomes_project 11 43734575 43744625 + Fam71b protein_coding processed_transcript MGP_BALBcJ_T0028636.1 MGP_BALBcJ_G0018134.1 mouse_genomes_project 11 43742734 43745971 + MGP_BALBcJ_P0028636 Fam71b protein_coding protein_coding MGP_BALBcJ_T0033151.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108527139 108540040 + MGP_BALBcJ_P0033151 Amz2 protein_coding protein_coding MGP_BALBcJ_T0033152.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108527169 108554280 + MGP_BALBcJ_P0033152 Amz2 protein_coding protein_coding MGP_BALBcJ_T0033153.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108527175 108532600 + Amz2 protein_coding retained_intron MGP_BALBcJ_T0033154.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108527417 108538619 + MGP_BALBcJ_P0033154 Amz2 protein_coding protein_coding MGP_BALBcJ_T0033155.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108534387 108536261 + Amz2 protein_coding processed_transcript MGP_BALBcJ_T0033156.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108535414 108536366 + Amz2 protein_coding retained_intron MGP_BALBcJ_T0033157.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108535627 108539143 + Amz2 protein_coding processed_transcript MGP_BALBcJ_T0033158.1 MGP_BALBcJ_G0019275.1 mouse_genomes_project 11 108541808 108554727 + Amz2 protein_coding processed_transcript MGP_BALBcJ_T0031960.1 MGP_BALBcJ_G0018975.1 mouse_genomes_project 11 96433613 96435930 - MGP_BALBcJ_P0031960 E130012A19Rik protein_coding protein_coding MGP_BALBcJ_T0033275.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113988578 113993233 - Btbd17 protein_coding processed_transcript MGP_BALBcJ_T0033276.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113988578 113993270 - Btbd17 protein_coding processed_transcript MGP_BALBcJ_T0033277.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113988578 113993257 - MGP_BALBcJ_P0033277 Btbd17 protein_coding protein_coding MGP_BALBcJ_T0033278.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113989467 113993305 - Btbd17 protein_coding processed_transcript MGP_BALBcJ_T0033279.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113989646 113993259 - Btbd17 protein_coding processed_transcript MGP_BALBcJ_T0033280.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113989793 113993233 - Btbd17 protein_coding processed_transcript MGP_BALBcJ_T0033281.1 MGP_BALBcJ_G0019302.1 mouse_genomes_project 11 113989830 113993252 - Btbd17 protein_coding processed_transcript MGP_BALBcJ_T0006358.1 MGP_BALBcJ_G0005302.1 mouse_genomes_project 11 121104369 121104572 + Gm29513 lincRNA lincRNA MGP_BALBcJ_T0030534.1 MGP_BALBcJ_G0018620.1 mouse_genomes_project 11 72164204 72165295 + MGP_BALBcJ_P0030534 Olfr397 protein_coding protein_coding MGP_BALBcJ_T0031615.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92655378 92705079 + Spag9 protein_coding processed_transcript MGP_BALBcJ_T0031616.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92655390 92712103 + Spag9 protein_coding processed_transcript MGP_BALBcJ_T0031617.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92655390 92786508 + MGP_BALBcJ_P0031617 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031618.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705020 92759333 + MGP_BALBcJ_P0031618 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031619.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705568 92768188 + MGP_BALBcJ_P0031619 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031620.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705640 92721802 + Spag9 protein_coding processed_transcript MGP_BALBcJ_T0031621.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705655 92786503 + MGP_BALBcJ_P0031621 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031622.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705655 92786503 + MGP_BALBcJ_P0031622 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031623.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705718 92786508 + MGP_BALBcJ_P0031623 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031624.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92705815 92786506 + MGP_BALBcJ_P0031624 Spag9 protein_coding protein_coding MGP_BALBcJ_T0031625.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92732686 92755691 + Spag9 protein_coding processed_transcript MGP_BALBcJ_T0031626.1 MGP_BALBcJ_G0018890.1 mouse_genomes_project 11 92743566 92786508 + MGP_BALBcJ_P0031626 Spag9 protein_coding protein_coding MGP_BALBcJ_T0003104.1 MGP_BALBcJ_G0002885.1 mouse_genomes_project 11 8690647 8691954 - Gm12000 antisense antisense MGP_BALBcJ_T0028858.1 MGP_BALBcJ_G0018198.1 mouse_genomes_project 11 48547874 48548822 + MGP_BALBcJ_P0028858 Olfr1378 protein_coding protein_coding MGP_BALBcJ_T0003278.1 MGP_BALBcJ_G0003025.1 mouse_genomes_project 11 100218291 100220164 - Gm11615 antisense antisense MGP_BALBcJ_T0009697.1 MGP_BALBcJ_G0007822.1 mouse_genomes_project 11 78126232 78126298 + Mir193a miRNA miRNA MGP_BALBcJ_T0006149.1 MGP_BALBcJ_G0005137.1 mouse_genomes_project 11 15472978 15498795 - Gm12022 lincRNA lincRNA MGP_BALBcJ_T0029272.1 MGP_BALBcJ_G0018329.1 mouse_genomes_project 11 57091546 57098839 - MGP_BALBcJ_P0029272 Gjc2 protein_coding protein_coding MGP_BALBcJ_T0029273.1 MGP_BALBcJ_G0018329.1 mouse_genomes_project 11 57091546 57099226 - MGP_BALBcJ_P0029273 Gjc2 protein_coding protein_coding MGP_BALBcJ_T0009624.1 MGP_BALBcJ_G0007749.1 mouse_genomes_project 11 1051105 1051188 + Mir3060 miRNA miRNA MGP_BALBcJ_T0028860.1 MGP_BALBcJ_G0018200.1 mouse_genomes_project 11 48586035 48586959 + MGP_BALBcJ_P0028860 Olfr51 protein_coding protein_coding MGP_BALBcJ_T0012646.1 MGP_BALBcJ_G0010743.1 mouse_genomes_project 11 72298191 72298716 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028470.1 MGP_BALBcJ_G0018090.1 mouse_genomes_project 11 31246136 31256747 + MGP_BALBcJ_P0028470 Kcnmb1 protein_coding protein_coding MGP_BALBcJ_T0100503.1 MGP_BALBcJ_G0038539.1 mouse_genomes_project 11 46023649 46023768 + Gm24422 snoRNA snoRNA MGP_BALBcJ_T0012588.1 MGP_BALBcJ_G0010685.1 mouse_genomes_project 11 53275030 53275200 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030524.1 MGP_BALBcJ_G0018613.1 mouse_genomes_project 11 71995608 72130306 + MGP_BALBcJ_P0030524 protein_coding protein_coding MGP_BALBcJ_T0030525.1 MGP_BALBcJ_G0018613.1 mouse_genomes_project 11 71995626 72129837 + MGP_BALBcJ_P0030525 protein_coding protein_coding MGP_BALBcJ_T0030532.1 MGP_BALBcJ_G0018613.1 mouse_genomes_project 11 72129367 72130306 + MGP_BALBcJ_P0030532 protein_coding protein_coding MGP_BALBcJ_T0029795.1 MGP_BALBcJ_G0018447.1 mouse_genomes_project 11 66983976 66987095 + MGP_BALBcJ_P0029795 Rpl26 protein_coding protein_coding MGP_BALBcJ_T0029796.1 MGP_BALBcJ_G0018447.1 mouse_genomes_project 11 66984003 66987071 + MGP_BALBcJ_P0029796 Rpl26 protein_coding protein_coding MGP_BALBcJ_T0029797.1 MGP_BALBcJ_G0018447.1 mouse_genomes_project 11 66984020 66985695 + MGP_BALBcJ_P0029797 Rpl26 protein_coding protein_coding MGP_BALBcJ_T0029798.1 MGP_BALBcJ_G0018447.1 mouse_genomes_project 11 66984028 66987094 + MGP_BALBcJ_P0029798 Rpl26 protein_coding protein_coding MGP_BALBcJ_T0029799.1 MGP_BALBcJ_G0018447.1 mouse_genomes_project 11 66985245 66987094 + Rpl26 protein_coding retained_intron MGP_BALBcJ_T0029800.1 MGP_BALBcJ_G0018447.1 mouse_genomes_project 11 66985609 66989684 + Rpl26 protein_coding processed_transcript MGP_BALBcJ_T0012590.1 MGP_BALBcJ_G0010687.1 mouse_genomes_project 11 54082618 54082847 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012429.1 MGP_BALBcJ_G0010526.1 mouse_genomes_project 11 519080 519918 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028489.1 MGP_BALBcJ_G0018096.1 mouse_genomes_project 11 32406212 32997844 + MGP_BALBcJ_P0028489 protein_coding protein_coding MGP_BALBcJ_T0028490.1 MGP_BALBcJ_G0018096.1 mouse_genomes_project 11 32456718 32522594 + protein_coding processed_transcript MGP_BALBcJ_T0028491.1 MGP_BALBcJ_G0018096.1 mouse_genomes_project 11 32462876 32797656 + protein_coding processed_transcript MGP_BALBcJ_T0028492.1 MGP_BALBcJ_G0018096.1 mouse_genomes_project 11 32832424 32901089 + protein_coding processed_transcript MGP_BALBcJ_T0032041.1 MGP_BALBcJ_G0018993.1 mouse_genomes_project 11 97040083 97088690 + MGP_BALBcJ_P0032041 Cdk12 protein_coding protein_coding MGP_BALBcJ_T0032042.1 MGP_BALBcJ_G0018993.1 mouse_genomes_project 11 97040342 97083838 + MGP_BALBcJ_P0032042 Cdk12 protein_coding protein_coding MGP_BALBcJ_T0032043.1 MGP_BALBcJ_G0018993.1 mouse_genomes_project 11 97040363 97088170 + MGP_BALBcJ_P0032043 Cdk12 protein_coding protein_coding MGP_BALBcJ_T0032044.1 MGP_BALBcJ_G0018993.1 mouse_genomes_project 11 97057529 97062651 + Cdk12 protein_coding processed_transcript MGP_BALBcJ_T0032045.1 MGP_BALBcJ_G0018993.1 mouse_genomes_project 11 97078870 97116010 + Cdk12 protein_coding processed_transcript MGP_BALBcJ_T0032046.1 MGP_BALBcJ_G0018993.1 mouse_genomes_project 11 97100652 97105353 + Cdk12 protein_coding processed_transcript MGP_BALBcJ_T0012635.1 MGP_BALBcJ_G0010732.1 mouse_genomes_project 11 68924875 68925296 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033172.1 MGP_BALBcJ_G0019279.1 mouse_genomes_project 11 108754317 108758874 + Prkar1a protein_coding processed_transcript MGP_BALBcJ_T0033173.1 MGP_BALBcJ_G0019279.1 mouse_genomes_project 11 108754317 108774555 + MGP_BALBcJ_P0033173 Prkar1a protein_coding protein_coding MGP_BALBcJ_T0033174.1 MGP_BALBcJ_G0019279.1 mouse_genomes_project 11 108755487 108766652 + MGP_BALBcJ_P0033174 Prkar1a protein_coding protein_coding MGP_BALBcJ_T0033175.1 MGP_BALBcJ_G0019279.1 mouse_genomes_project 11 108755833 108774555 + MGP_BALBcJ_P0033175 Prkar1a protein_coding protein_coding MGP_BALBcJ_T0033176.1 MGP_BALBcJ_G0019279.1 mouse_genomes_project 11 108770842 108771875 + Prkar1a protein_coding processed_transcript MGP_BALBcJ_T0012465.1 MGP_BALBcJ_G0010562.1 mouse_genomes_project 11 12071928 12073028 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003208.1 MGP_BALBcJ_G0002972.1 mouse_genomes_project 11 73314836 73317709 - Gm12333 antisense antisense MGP_BALBcJ_T0012522.1 MGP_BALBcJ_G0010619.1 mouse_genomes_project 11 27184821 27186060 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000841.1 MGP_BALBcJ_G0000773.1 mouse_genomes_project 11 42554037 42554340 - TEC TEC MGP_BALBcJ_T0029998.1 MGP_BALBcJ_G0018491.1 mouse_genomes_project 11 67870598 67900615 - MGP_BALBcJ_P0029998 Polr2a protein_coding protein_coding MGP_BALBcJ_T0029999.1 MGP_BALBcJ_G0018491.1 mouse_genomes_project 11 67871011 67900201 - MGP_BALBcJ_P0029999 Polr2a protein_coding protein_coding MGP_BALBcJ_T0030000.1 MGP_BALBcJ_G0018491.1 mouse_genomes_project 11 67872812 67873950 - Polr2a protein_coding processed_transcript MGP_BALBcJ_T0030001.1 MGP_BALBcJ_G0018491.1 mouse_genomes_project 11 67880281 67881228 - Polr2a protein_coding processed_transcript MGP_BALBcJ_T0031904.1 MGP_BALBcJ_G0018962.1 mouse_genomes_project 11 95831522 95839639 - MGP_BALBcJ_P0031904 Lrrc46 protein_coding protein_coding MGP_BALBcJ_T0098816.1 MGP_BALBcJ_G0036869.1 mouse_genomes_project 11 239020 240359 - Gm11948 sense_intronic sense_intronic MGP_BALBcJ_T0027881.1 MGP_BALBcJ_G0017950.1 mouse_genomes_project 11 2824462 2834595 + MGP_BALBcJ_P0027881 Aebp1 protein_coding protein_coding MGP_BALBcJ_T0027882.1 MGP_BALBcJ_G0017950.1 mouse_genomes_project 11 2830102 2834595 + MGP_BALBcJ_P0027882 Aebp1 protein_coding protein_coding MGP_BALBcJ_T0027883.1 MGP_BALBcJ_G0017950.1 mouse_genomes_project 11 2831648 2832642 + Aebp1 protein_coding processed_transcript MGP_BALBcJ_T0029388.1 MGP_BALBcJ_G0018356.1 mouse_genomes_project 11 58333830 58350773 - MGP_BALBcJ_P0029388 Atpaf2 protein_coding protein_coding MGP_BALBcJ_T0029389.1 MGP_BALBcJ_G0018356.1 mouse_genomes_project 11 58334682 58350740 - MGP_BALBcJ_P0029389 Atpaf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029390.1 MGP_BALBcJ_G0018356.1 mouse_genomes_project 11 58337041 58350764 - Atpaf2 protein_coding processed_transcript MGP_BALBcJ_T0029391.1 MGP_BALBcJ_G0018356.1 mouse_genomes_project 11 58338998 58350757 - Atpaf2 protein_coding processed_transcript MGP_BALBcJ_T0029392.1 MGP_BALBcJ_G0018356.1 mouse_genomes_project 11 58340577 58352165 - Atpaf2 protein_coding processed_transcript MGP_BALBcJ_T0029393.1 MGP_BALBcJ_G0018356.1 mouse_genomes_project 11 58342442 58350758 - Atpaf2 protein_coding retained_intron MGP_BALBcJ_T0028494.1 MGP_BALBcJ_G0018098.1 mouse_genomes_project 11 33087287 33088790 - MGP_BALBcJ_P0028494 Fbll1 protein_coding protein_coding MGP_BALBcJ_T0032232.1 MGP_BALBcJ_G0019072.1 mouse_genomes_project 11 98862293 98863442 + MGP_BALBcJ_P0032232 Krtap9-5 protein_coding protein_coding MGP_BALBcJ_T0029716.1 MGP_BALBcJ_G0018427.1 mouse_genomes_project 11 65238814 65263813 + MGP_BALBcJ_P0029716 Myh1 protein_coding protein_coding MGP_BALBcJ_T0029717.1 MGP_BALBcJ_G0018427.1 mouse_genomes_project 11 65238873 65263735 + MGP_BALBcJ_P0029717 Myh1 protein_coding protein_coding MGP_BALBcJ_T0029718.1 MGP_BALBcJ_G0018427.1 mouse_genomes_project 11 65238900 65241018 + MGP_BALBcJ_P0029718 Myh1 protein_coding protein_coding MGP_BALBcJ_T0029719.1 MGP_BALBcJ_G0018427.1 mouse_genomes_project 11 65239168 65263811 + MGP_BALBcJ_P0029719 Myh1 protein_coding protein_coding MGP_BALBcJ_T0100550.1 MGP_BALBcJ_G0038586.1 mouse_genomes_project 11 115925624 115925699 + Snord1b snoRNA snoRNA MGP_BALBcJ_T0017181.1 MGP_BALBcJ_G0015126.1 mouse_genomes_project 11 81810632 81813549 + AA465934 processed_transcript antisense MGP_BALBcJ_T0017182.1 MGP_BALBcJ_G0015126.1 mouse_genomes_project 11 81810653 81813550 + AA465934 processed_transcript antisense MGP_BALBcJ_T0017183.1 MGP_BALBcJ_G0015126.1 mouse_genomes_project 11 81810661 81811224 + AA465934 processed_transcript retained_intron MGP_BALBcJ_T0017184.1 MGP_BALBcJ_G0015126.1 mouse_genomes_project 11 81810675 81813547 + AA465934 processed_transcript antisense MGP_BALBcJ_T0017185.1 MGP_BALBcJ_G0015126.1 mouse_genomes_project 11 81810676 81813548 + AA465934 processed_transcript retained_intron MGP_BALBcJ_T0032351.1 MGP_BALBcJ_G0019111.1 mouse_genomes_project 11 99699749 99701609 - MGP_BALBcJ_P0032351 Hcrt protein_coding protein_coding MGP_BALBcJ_T0032352.1 MGP_BALBcJ_G0019111.1 mouse_genomes_project 11 99700371 99701612 - MGP_BALBcJ_P0032352 Hcrt protein_coding protein_coding MGP_BALBcJ_T0029165.1 MGP_BALBcJ_G0018281.1 mouse_genomes_project 11 55765026 55765641 - MGP_BALBcJ_P0029165 Bex4 protein_coding protein_coding MGP_BALBcJ_T0030830.1 MGP_BALBcJ_G0018693.1 mouse_genomes_project 11 76031287 76060539 + MGP_BALBcJ_P0030830 Nufip2 protein_coding unknown_likely_coding MGP_BALBcJ_T0030831.1 MGP_BALBcJ_G0018693.1 mouse_genomes_project 11 76031607 76088790 + MGP_BALBcJ_P0030831 Nufip2 protein_coding protein_coding MGP_BALBcJ_T0030832.1 MGP_BALBcJ_G0018693.1 mouse_genomes_project 11 76032894 76037489 + Nufip2 protein_coding processed_transcript MGP_BALBcJ_T0030833.1 MGP_BALBcJ_G0018693.1 mouse_genomes_project 11 76033036 76037287 + Nufip2 protein_coding processed_transcript MGP_BALBcJ_T0033294.1 MGP_BALBcJ_G0019306.1 mouse_genomes_project 11 114121297 114132842 - MGP_BALBcJ_P0033294 Cd300lb protein_coding protein_coding MGP_BALBcJ_T0033295.1 MGP_BALBcJ_G0019306.1 mouse_genomes_project 11 114121297 114132827 - MGP_BALBcJ_P0033295 Cd300lb protein_coding protein_coding MGP_BALBcJ_T0033296.1 MGP_BALBcJ_G0019306.1 mouse_genomes_project 11 114126846 114132743 - Cd300lb protein_coding processed_transcript MGP_BALBcJ_T0030232.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68725332 68779600 + MGP_BALBcJ_P0030232 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030233.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68725341 68779469 + MGP_BALBcJ_P0030233 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030234.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68725349 68779596 + MGP_BALBcJ_P0030234 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030235.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68725468 68779601 + MGP_BALBcJ_P0030235 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030236.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68725521 68779365 + MGP_BALBcJ_P0030236 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030237.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68763396 68769417 + Mink1 protein_coding processed_transcript MGP_BALBcJ_T0030238.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68766401 68779601 + MGP_BALBcJ_P0030238 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030239.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68768585 68772177 + MGP_BALBcJ_P0030239 Mink1 protein_coding protein_coding MGP_BALBcJ_T0030240.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68768608 68771832 + MGP_BALBcJ_P0030240 Mink1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030241.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68771453 68772526 + Mink1 protein_coding retained_intron MGP_BALBcJ_T0030242.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68772564 68773581 + Mink1 protein_coding retained_intron MGP_BALBcJ_T0030243.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68774490 68775500 + Mink1 protein_coding retained_intron MGP_BALBcJ_T0030244.1 MGP_BALBcJ_G0018543.1 mouse_genomes_project 11 68774841 68776632 + Mink1 protein_coding retained_intron MGP_BALBcJ_T0099041.1 MGP_BALBcJ_G0037081.1 mouse_genomes_project 11 97122748 97124808 + Gm20644 sense_overlapping sense_overlapping MGP_BALBcJ_T0006172.1 MGP_BALBcJ_G0005158.1 mouse_genomes_project 11 22296038 22439422 + 4933427E13Rik lincRNA lincRNA MGP_BALBcJ_T0006174.1 MGP_BALBcJ_G0005158.1 mouse_genomes_project 11 22398440 22439426 + 4933427E13Rik lincRNA lincRNA MGP_BALBcJ_T0006175.1 MGP_BALBcJ_G0005158.1 mouse_genomes_project 11 22398469 22403087 + 4933427E13Rik lincRNA lincRNA MGP_BALBcJ_T0006176.1 MGP_BALBcJ_G0005158.1 mouse_genomes_project 11 22402325 22430475 + 4933427E13Rik lincRNA lincRNA MGP_BALBcJ_T0033062.1 MGP_BALBcJ_G0019257.1 mouse_genomes_project 11 105868749 105969132 - MGP_BALBcJ_P0033062 Smurf2 protein_coding protein_coding MGP_BALBcJ_T0033063.1 MGP_BALBcJ_G0019257.1 mouse_genomes_project 11 105870708 105968692 - Smurf2 protein_coding processed_transcript MGP_BALBcJ_T0033064.1 MGP_BALBcJ_G0019257.1 mouse_genomes_project 11 105870708 105968887 - MGP_BALBcJ_P0033064 Smurf2 protein_coding protein_coding MGP_BALBcJ_T0033065.1 MGP_BALBcJ_G0019257.1 mouse_genomes_project 11 105871296 105968776 - MGP_BALBcJ_P0033065 Smurf2 protein_coding protein_coding MGP_BALBcJ_T0033066.1 MGP_BALBcJ_G0019257.1 mouse_genomes_project 11 105873118 105877407 - Smurf2 protein_coding processed_transcript MGP_BALBcJ_T0033067.1 MGP_BALBcJ_G0019257.1 mouse_genomes_project 11 105878988 105887693 - Smurf2 protein_coding processed_transcript MGP_BALBcJ_T0028453.1 MGP_BALBcJ_G0018084.1 mouse_genomes_project 11 30462525 30465344 - MGP_BALBcJ_P0028453 Tlx3 protein_coding protein_coding MGP_BALBcJ_T0101839.1 MGP_BALBcJ_G0039763.1 mouse_genomes_project 11 2721450 2742161 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101840.1 MGP_BALBcJ_G0039763.1 mouse_genomes_project 11 2721471 2742525 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101841.1 MGP_BALBcJ_G0039763.1 mouse_genomes_project 11 2721471 2745000 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101842.1 MGP_BALBcJ_G0039763.1 mouse_genomes_project 11 2721538 2744227 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101843.1 MGP_BALBcJ_G0039763.1 mouse_genomes_project 11 2724883 2744718 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0033466.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115056003 115065977 + MGP_BALBcJ_P0033466 Tsen54 protein_coding protein_coding MGP_BALBcJ_T0033467.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115056003 115065977 + MGP_BALBcJ_P0033467 Tsen54 protein_coding protein_coding MGP_BALBcJ_T0033468.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115056025 115056825 + Tsen54 protein_coding retained_intron MGP_BALBcJ_T0033469.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115056050 115063415 + Tsen54 protein_coding retained_intron MGP_BALBcJ_T0033470.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115056084 115063394 + Tsen54 protein_coding retained_intron MGP_BALBcJ_T0033471.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115056977 115064586 + MGP_BALBcJ_P0033471 Tsen54 protein_coding protein_coding MGP_BALBcJ_T0033472.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115063596 115065972 + MGP_BALBcJ_P0033472 Tsen54 protein_coding protein_coding MGP_BALBcJ_T0033473.1 MGP_BALBcJ_G0019344.1 mouse_genomes_project 11 115063732 115065152 + MGP_BALBcJ_P0033473 Tsen54 protein_coding protein_coding MGP_BALBcJ_T0099248.1 MGP_BALBcJ_G0037284.1 mouse_genomes_project 11 51147243 51147350 + Gm25930 snRNA snRNA MGP_BALBcJ_T0028030.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8784044 8805130 - Fignl1 protein_coding processed_transcript MGP_BALBcJ_T0028031.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8784056 8797665 - Fignl1 protein_coding processed_transcript MGP_BALBcJ_T0028032.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8796491 8805167 - MGP_BALBcJ_P0028032 Fignl1 protein_coding protein_coding MGP_BALBcJ_T0028033.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8796491 8805167 - MGP_BALBcJ_P0028033 Fignl1 protein_coding protein_coding MGP_BALBcJ_T0028034.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8796491 8805164 - MGP_BALBcJ_P0028034 Fignl1 protein_coding protein_coding MGP_BALBcJ_T0028035.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8796755 8805137 - MGP_BALBcJ_P0028035 Fignl1 protein_coding protein_coding MGP_BALBcJ_T0028036.1 MGP_BALBcJ_G0017987.1 mouse_genomes_project 11 8798900 8805153 - MGP_BALBcJ_P0028036 Fignl1 protein_coding protein_coding MGP_BALBcJ_T0100492.1 MGP_BALBcJ_G0038528.1 mouse_genomes_project 11 18291027 18291166 - Gm23582 snoRNA snoRNA MGP_BALBcJ_T0028631.1 MGP_BALBcJ_G0018133.1 mouse_genomes_project 11 43661256 43726177 - MGP_BALBcJ_P0028631 Itk protein_coding protein_coding MGP_BALBcJ_T0028632.1 MGP_BALBcJ_G0018133.1 mouse_genomes_project 11 43661256 43726199 - MGP_BALBcJ_P0028632 Itk protein_coding protein_coding MGP_BALBcJ_T0028633.1 MGP_BALBcJ_G0018133.1 mouse_genomes_project 11 43681393 43726141 - MGP_BALBcJ_P0028633 Itk protein_coding protein_coding MGP_BALBcJ_T0028634.1 MGP_BALBcJ_G0018133.1 mouse_genomes_project 11 43699937 43726145 - Itk protein_coding retained_intron MGP_BALBcJ_T0012712.1 MGP_BALBcJ_G0010809.1 mouse_genomes_project 11 98560674 98561981 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032231.1 MGP_BALBcJ_G0019071.1 mouse_genomes_project 11 98850138 98851073 + MGP_BALBcJ_P0032231 Krtap31-2 protein_coding protein_coding MGP_BALBcJ_T0003126.1 MGP_BALBcJ_G0002902.1 mouse_genomes_project 11 33575131 33577067 + Gm12127 antisense antisense MGP_BALBcJ_T0029605.1 MGP_BALBcJ_G0018396.1 mouse_genomes_project 11 60565738 60567553 + MGP_BALBcJ_P0029605 Ubb protein_coding protein_coding MGP_BALBcJ_T0006144.1 MGP_BALBcJ_G0005132.1 mouse_genomes_project 11 1201876 1203356 + Gm11958 lincRNA lincRNA MGP_BALBcJ_T0031898.1 MGP_BALBcJ_G0018960.1 mouse_genomes_project 11 95809662 95821655 + MGP_BALBcJ_P0031898 Sp6 protein_coding protein_coding MGP_BALBcJ_T0031899.1 MGP_BALBcJ_G0018960.1 mouse_genomes_project 11 95814843 95821652 + MGP_BALBcJ_P0031899 Sp6 protein_coding protein_coding MGP_BALBcJ_T0006177.1 MGP_BALBcJ_G0005160.1 mouse_genomes_project 11 25848750 25861123 + 2810471M01Rik lincRNA lincRNA MGP_BALBcJ_T0028439.1 MGP_BALBcJ_G0018080.1 mouse_genomes_project 11 29896514 30000526 + MGP_BALBcJ_P0028439 Fbxw11 protein_coding protein_coding MGP_BALBcJ_T0028440.1 MGP_BALBcJ_G0018080.1 mouse_genomes_project 11 29896574 29907044 + Fbxw11 protein_coding processed_transcript MGP_BALBcJ_T0028441.1 MGP_BALBcJ_G0018080.1 mouse_genomes_project 11 29896656 30000746 + MGP_BALBcJ_P0028441 Fbxw11 protein_coding protein_coding MGP_BALBcJ_T0028442.1 MGP_BALBcJ_G0018080.1 mouse_genomes_project 11 29896665 30000773 + MGP_BALBcJ_P0028442 Fbxw11 protein_coding protein_coding MGP_BALBcJ_T0028443.1 MGP_BALBcJ_G0018080.1 mouse_genomes_project 11 29896694 29976009 + MGP_BALBcJ_P0028443 Fbxw11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030017.1 MGP_BALBcJ_G0018497.1 mouse_genomes_project 11 67964646 67966546 - MGP_BALBcJ_P0030017 4933402P03Rik protein_coding protein_coding MGP_BALBcJ_T0012453.1 MGP_BALBcJ_G0010550.1 mouse_genomes_project 11 5778655 5779425 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006290.1 MGP_BALBcJ_G0005250.1 mouse_genomes_project 11 89478026 89563110 + 4930405D11Rik lincRNA lincRNA MGP_BALBcJ_T0006291.1 MGP_BALBcJ_G0005250.1 mouse_genomes_project 11 89548372 89563054 + 4930405D11Rik lincRNA lincRNA MGP_BALBcJ_T0006292.1 MGP_BALBcJ_G0005250.1 mouse_genomes_project 11 89548397 89562960 + 4930405D11Rik lincRNA lincRNA MGP_BALBcJ_T0003102.1 MGP_BALBcJ_G0002883.1 mouse_genomes_project 11 4162443 4165581 - antisense antisense MGP_BALBcJ_T0028704.1 MGP_BALBcJ_G0018158.1 mouse_genomes_project 11 46603386 46609677 + MGP_BALBcJ_P0028704 Olfr1395 protein_coding protein_coding MGP_BALBcJ_T0028705.1 MGP_BALBcJ_G0018158.1 mouse_genomes_project 11 46608723 46609677 + MGP_BALBcJ_P0028705 Olfr1395 protein_coding protein_coding MGP_BALBcJ_T0003123.1 MGP_BALBcJ_G0002899.1 mouse_genomes_project 11 30976053 30982530 + Gm12120 antisense antisense MGP_BALBcJ_T0006257.1 MGP_BALBcJ_G0005229.1 mouse_genomes_project 11 78118895 78119690 + Gm11205 lincRNA lincRNA MGP_BALBcJ_T0003350.1 MGP_BALBcJ_G0003086.1 mouse_genomes_project 11 120246008 120246929 + Gm28192 antisense antisense MGP_BALBcJ_T0102147.1 MGP_BALBcJ_G0039964.1 mouse_genomes_project 11 72520364 72521384 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100547.1 MGP_BALBcJ_G0038583.1 mouse_genomes_project 11 105537029 105537162 + Gm22711 snoRNA snoRNA MGP_BALBcJ_T0028393.1 MGP_BALBcJ_G0018069.1 mouse_genomes_project 11 29447536 29451106 + MGP_BALBcJ_P0028393 Snrnp25 protein_coding protein_coding MGP_BALBcJ_T0028394.1 MGP_BALBcJ_G0018069.1 mouse_genomes_project 11 29447567 29450530 + MGP_BALBcJ_P0028394 Snrnp25 protein_coding protein_coding MGP_BALBcJ_T0028395.1 MGP_BALBcJ_G0018069.1 mouse_genomes_project 11 29447579 29449773 + Snrnp25 protein_coding processed_transcript MGP_BALBcJ_T0028396.1 MGP_BALBcJ_G0018069.1 mouse_genomes_project 11 29447609 29450995 + MGP_BALBcJ_P0028396 Snrnp25 protein_coding protein_coding MGP_BALBcJ_T0028397.1 MGP_BALBcJ_G0018069.1 mouse_genomes_project 11 29448883 29451106 + Snrnp25 protein_coding retained_intron MGP_BALBcJ_T0033001.1 MGP_BALBcJ_G0019244.1 mouse_genomes_project 11 105312268 105323728 + MGP_BALBcJ_P0033001 Tcam1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033002.1 MGP_BALBcJ_G0019244.1 mouse_genomes_project 11 105312344 105324340 + MGP_BALBcJ_P0033002 Tcam1 protein_coding protein_coding MGP_BALBcJ_T0102137.1 MGP_BALBcJ_G0039954.1 mouse_genomes_project 11 56313510 56314450 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0030514.1 MGP_BALBcJ_G0018607.1 mouse_genomes_project 11 71690278 71695937 - MGP_BALBcJ_P0030514 Olfr381 protein_coding protein_coding MGP_BALBcJ_T0030515.1 MGP_BALBcJ_G0018607.1 mouse_genomes_project 11 71690278 71691345 - MGP_BALBcJ_P0030515 Olfr381 protein_coding protein_coding MGP_BALBcJ_T0009687.1 MGP_BALBcJ_G0007812.1 mouse_genomes_project 11 73456630 73456721 + Mir212 miRNA miRNA MGP_BALBcJ_T0012633.1 MGP_BALBcJ_G0010730.1 mouse_genomes_project 11 68587664 68588202 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003192.1 MGP_BALBcJ_G0002960.1 mouse_genomes_project 11 65250041 65278154 - Gm12300 antisense antisense MGP_BALBcJ_T0003193.1 MGP_BALBcJ_G0002960.1 mouse_genomes_project 11 65263116 65268095 - Gm12300 antisense antisense MGP_BALBcJ_T0003194.1 MGP_BALBcJ_G0002960.1 mouse_genomes_project 11 65263433 65277862 - Gm12300 antisense antisense MGP_BALBcJ_T0009736.1 MGP_BALBcJ_G0007861.1 mouse_genomes_project 11 105969074 105969178 - Gm27322 miRNA miRNA MGP_BALBcJ_T0012434.1 MGP_BALBcJ_G0010531.1 mouse_genomes_project 11 1144725 1145237 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029915.1 MGP_BALBcJ_G0018470.1 mouse_genomes_project 11 67512673 67516164 - protein_coding processed_transcript MGP_BALBcJ_T0029916.1 MGP_BALBcJ_G0018470.1 mouse_genomes_project 11 67513532 67516006 - MGP_BALBcJ_P0029916 protein_coding protein_coding MGP_BALBcJ_T0029673.1 MGP_BALBcJ_G0018416.1 mouse_genomes_project 11 63198943 63294415 - MGP_BALBcJ_P0029673 Myocd protein_coding protein_coding MGP_BALBcJ_T0029674.1 MGP_BALBcJ_G0018416.1 mouse_genomes_project 11 63198952 63294463 - MGP_BALBcJ_P0029674 Myocd protein_coding protein_coding MGP_BALBcJ_T0029675.1 MGP_BALBcJ_G0018416.1 mouse_genomes_project 11 63199147 63204556 - Myocd protein_coding processed_transcript MGP_BALBcJ_T0029676.1 MGP_BALBcJ_G0018416.1 mouse_genomes_project 11 63200820 63242869 - MGP_BALBcJ_P0029676 Myocd protein_coding protein_coding MGP_BALBcJ_T0029677.1 MGP_BALBcJ_G0018416.1 mouse_genomes_project 11 63220718 63229850 - MGP_BALBcJ_P0029677 Myocd protein_coding protein_coding MGP_BALBcJ_T0029678.1 MGP_BALBcJ_G0018416.1 mouse_genomes_project 11 63248041 63294328 - Myocd protein_coding processed_transcript MGP_BALBcJ_T0006305.1 MGP_BALBcJ_G0005259.1 mouse_genomes_project 11 96714875 96724271 + Gm11630 lincRNA lincRNA MGP_BALBcJ_T0029726.1 MGP_BALBcJ_G0018430.1 mouse_genomes_project 11 65365539 65414731 + MGP_BALBcJ_P0029726 protein_coding unknown_likely_coding MGP_BALBcJ_T0029727.1 MGP_BALBcJ_G0018430.1 mouse_genomes_project 11 65408067 65412428 + MGP_BALBcJ_P0029727 protein_coding protein_coding MGP_BALBcJ_T0100511.1 MGP_BALBcJ_G0038547.1 mouse_genomes_project 11 56508272 56508404 + Gm22599 snoRNA snoRNA MGP_BALBcJ_T0029482.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59448108 59453773 - MGP_BALBcJ_P0029482 Rnf112 protein_coding protein_coding MGP_BALBcJ_T0029483.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59448108 59453672 - MGP_BALBcJ_P0029483 Rnf112 protein_coding protein_coding MGP_BALBcJ_T0029484.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59448108 59453672 - MGP_BALBcJ_P0029484 Rnf112 protein_coding protein_coding MGP_BALBcJ_T0029485.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59451711 59453798 - Rnf112 protein_coding processed_transcript MGP_BALBcJ_T0029486.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59451929 59453586 - Rnf112 protein_coding processed_transcript MGP_BALBcJ_T0029487.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59452401 59453609 - Rnf112 protein_coding processed_transcript MGP_BALBcJ_T0029488.1 MGP_BALBcJ_G0018378.1 mouse_genomes_project 11 59452582 59453600 - Rnf112 protein_coding processed_transcript MGP_BALBcJ_T0003134.1 MGP_BALBcJ_G0002910.1 mouse_genomes_project 11 43679206 43681936 + Gm12167 antisense antisense MGP_BALBcJ_T0030834.1 MGP_BALBcJ_G0018694.1 mouse_genomes_project 11 76064253 76067451 - Cryba1 protein_coding retained_intron MGP_BALBcJ_T0030835.1 MGP_BALBcJ_G0018694.1 mouse_genomes_project 11 76064265 76070900 - MGP_BALBcJ_P0030835 Cryba1 protein_coding protein_coding MGP_BALBcJ_T0003198.1 MGP_BALBcJ_G0002964.1 mouse_genomes_project 11 67170329 67173089 - 9330160F10Rik antisense antisense MGP_BALBcJ_T0012560.1 MGP_BALBcJ_G0010657.1 mouse_genomes_project 11 45888051 45889323 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003250.1 MGP_BALBcJ_G0003005.1 mouse_genomes_project 11 94448438 94461519 - Zfp652os antisense antisense MGP_BALBcJ_T0032082.1 MGP_BALBcJ_G0019004.1 mouse_genomes_project 11 97393355 97400761 + MGP_BALBcJ_P0032082 Zpbp2 protein_coding protein_coding MGP_BALBcJ_T0032083.1 MGP_BALBcJ_G0019004.1 mouse_genomes_project 11 97393388 97400761 + MGP_BALBcJ_P0032083 Zpbp2 protein_coding protein_coding MGP_BALBcJ_T0032084.1 MGP_BALBcJ_G0019004.1 mouse_genomes_project 11 97393408 97400752 + MGP_BALBcJ_P0032084 Zpbp2 protein_coding protein_coding MGP_BALBcJ_T0032085.1 MGP_BALBcJ_G0019004.1 mouse_genomes_project 11 97393410 97400752 + MGP_BALBcJ_P0032085 Zpbp2 protein_coding protein_coding MGP_BALBcJ_T0032086.1 MGP_BALBcJ_G0019004.1 mouse_genomes_project 11 97393436 97400629 + MGP_BALBcJ_P0032086 Zpbp2 protein_coding protein_coding MGP_BALBcJ_T0032087.1 MGP_BALBcJ_G0019004.1 mouse_genomes_project 11 97397538 97400481 + Zpbp2 protein_coding processed_transcript MGP_BALBcJ_T0009656.1 MGP_BALBcJ_G0007781.1 mouse_genomes_project 11 51525322 51525380 - Mir7671 miRNA miRNA MGP_BALBcJ_T0003241.1 MGP_BALBcJ_G0002999.1 mouse_genomes_project 11 87712847 87717202 + Dgkeos antisense antisense MGP_BALBcJ_T0003242.1 MGP_BALBcJ_G0002999.1 mouse_genomes_project 11 87714182 87717202 + Dgkeos antisense antisense MGP_BALBcJ_T0003243.1 MGP_BALBcJ_G0002999.1 mouse_genomes_project 11 87714356 87715979 + Dgkeos antisense antisense MGP_BALBcJ_T0003244.1 MGP_BALBcJ_G0002999.1 mouse_genomes_project 11 87714360 87715979 + Dgkeos antisense antisense MGP_BALBcJ_T0012513.1 MGP_BALBcJ_G0010610.1 mouse_genomes_project 11 24618354 24618830 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032250.1 MGP_BALBcJ_G0019085.1 mouse_genomes_project 11 99062959 99068249 - MGP_BALBcJ_P0032250 Krt19 protein_coding protein_coding MGP_BALBcJ_T0032251.1 MGP_BALBcJ_G0019085.1 mouse_genomes_project 11 99063056 99065839 - Krt19 protein_coding processed_transcript MGP_BALBcJ_T0032252.1 MGP_BALBcJ_G0019085.1 mouse_genomes_project 11 99064269 99070790 - Krt19 protein_coding processed_transcript MGP_BALBcJ_T0100516.1 MGP_BALBcJ_G0038552.1 mouse_genomes_project 11 60800771 60800912 + Gm24151 snoRNA snoRNA MGP_BALBcJ_T0028362.1 MGP_BALBcJ_G0018061.1 mouse_genomes_project 11 28169926 28193546 - MGP_BALBcJ_P0028362 Erlec1 protein_coding protein_coding MGP_BALBcJ_T0028363.1 MGP_BALBcJ_G0018061.1 mouse_genomes_project 11 28170904 28187846 - MGP_BALBcJ_P0028363 Erlec1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028364.1 MGP_BALBcJ_G0018061.1 mouse_genomes_project 11 28174061 28187462 - MGP_BALBcJ_P0028364 Erlec1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028365.1 MGP_BALBcJ_G0018061.1 mouse_genomes_project 11 28182083 28187579 - Erlec1 protein_coding retained_intron MGP_BALBcJ_T0028366.1 MGP_BALBcJ_G0018061.1 mouse_genomes_project 11 28192406 28194201 - Erlec1 protein_coding processed_transcript MGP_BALBcJ_T0012519.1 MGP_BALBcJ_G0010616.1 mouse_genomes_project 11 26749057 26749977 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098455.1 MGP_BALBcJ_G0036509.1 mouse_genomes_project 11 20693696 20693813 - Gm23114 rRNA rRNA MGP_BALBcJ_T0032903.1 MGP_BALBcJ_G0019220.1 mouse_genomes_project 11 103622930 103679097 + MGP_BALBcJ_P0032903 Itgb3 protein_coding protein_coding MGP_BALBcJ_T0032904.1 MGP_BALBcJ_G0019220.1 mouse_genomes_project 11 103652434 103678441 + Itgb3 protein_coding processed_transcript MGP_BALBcJ_T0029688.1 MGP_BALBcJ_G0018419.1 mouse_genomes_project 11 63852129 64206380 - MGP_BALBcJ_P0029688 Dnah9 protein_coding protein_coding MGP_BALBcJ_T0029689.1 MGP_BALBcJ_G0018419.1 mouse_genomes_project 11 63852250 64040641 - MGP_BALBcJ_P0029689 Dnah9 protein_coding protein_coding MGP_BALBcJ_T0029690.1 MGP_BALBcJ_G0018419.1 mouse_genomes_project 11 63878817 63883749 - Dnah9 protein_coding retained_intron MGP_BALBcJ_T0029691.1 MGP_BALBcJ_G0018419.1 mouse_genomes_project 11 63932666 63956297 - MGP_BALBcJ_P0029691 Dnah9 protein_coding protein_coding MGP_BALBcJ_T0029692.1 MGP_BALBcJ_G0018419.1 mouse_genomes_project 11 64157494 64206291 - MGP_BALBcJ_P0029692 Dnah9 protein_coding protein_coding MGP_BALBcJ_T0029693.1 MGP_BALBcJ_G0018419.1 mouse_genomes_project 11 64196595 64206398 - Dnah9 protein_coding retained_intron MGP_BALBcJ_T0003122.1 MGP_BALBcJ_G0002898.1 mouse_genomes_project 11 30966289 30968304 + Gm12119 antisense antisense MGP_BALBcJ_T0033855.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118527090 118545513 + MGP_BALBcJ_P0033855 Gaa protein_coding protein_coding MGP_BALBcJ_T0033856.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118527229 118545513 + MGP_BALBcJ_P0033856 Gaa protein_coding protein_coding MGP_BALBcJ_T0033857.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118527231 118533566 + MGP_BALBcJ_P0033857 Gaa protein_coding protein_coding MGP_BALBcJ_T0033858.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118529732 118535253 + Gaa protein_coding processed_transcript MGP_BALBcJ_T0033859.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118534681 118538491 + MGP_BALBcJ_P0033859 Gaa protein_coding protein_coding MGP_BALBcJ_T0033860.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118534969 118535728 + MGP_BALBcJ_P0033860 Gaa protein_coding protein_coding MGP_BALBcJ_T0033861.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118537874 118541601 + MGP_BALBcJ_P0033861 Gaa protein_coding protein_coding MGP_BALBcJ_T0033862.1 MGP_BALBcJ_G0019420.1 mouse_genomes_project 11 118539044 118539659 + Gaa protein_coding processed_transcript MGP_BALBcJ_T0009680.1 MGP_BALBcJ_G0007805.1 mouse_genomes_project 11 68596900 68596964 + Mir7115 miRNA miRNA MGP_BALBcJ_T0031312.1 MGP_BALBcJ_G0018816.1 mouse_genomes_project 11 83462439 83468342 - MGP_BALBcJ_P0031312 Znhit3 protein_coding protein_coding MGP_BALBcJ_T0031313.1 MGP_BALBcJ_G0018816.1 mouse_genomes_project 11 83462780 83468325 - Znhit3 protein_coding processed_transcript MGP_BALBcJ_T0031314.1 MGP_BALBcJ_G0018816.1 mouse_genomes_project 11 83462958 83468342 - Znhit3 protein_coding processed_transcript MGP_BALBcJ_T0031315.1 MGP_BALBcJ_G0018816.1 mouse_genomes_project 11 83462994 83468281 - Znhit3 protein_coding processed_transcript MGP_BALBcJ_T0031316.1 MGP_BALBcJ_G0018816.1 mouse_genomes_project 11 83467414 83468300 - Znhit3 protein_coding retained_intron MGP_BALBcJ_T0031785.1 MGP_BALBcJ_G0018930.1 mouse_genomes_project 11 94573777 94580162 + MGP_BALBcJ_P0031785 Phospho1 protein_coding protein_coding MGP_BALBcJ_T0031786.1 MGP_BALBcJ_G0018930.1 mouse_genomes_project 11 94573778 94582120 + MGP_BALBcJ_P0031786 Phospho1 protein_coding protein_coding MGP_BALBcJ_T0031788.1 MGP_BALBcJ_G0018930.1 mouse_genomes_project 11 94580223 94581053 + MGP_BALBcJ_P0031788 Phospho1 protein_coding protein_coding MGP_BALBcJ_T0100523.1 MGP_BALBcJ_G0038559.1 mouse_genomes_project 11 70814049 70814198 - Gm24143 snoRNA snoRNA MGP_BALBcJ_T0003211.1 MGP_BALBcJ_G0002975.1 mouse_genomes_project 11 76379665 76382319 - Dhrs13os antisense antisense MGP_BALBcJ_T0029493.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59488844 59494299 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029494.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59488844 59494329 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029495.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59488844 59494299 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029496.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59488844 59494329 - MGP_BALBcJ_P0029496 Mapk7 protein_coding protein_coding MGP_BALBcJ_T0029497.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59488844 59494299 - MGP_BALBcJ_P0029497 Mapk7 protein_coding protein_coding MGP_BALBcJ_T0029498.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59488844 59494329 - MGP_BALBcJ_P0029498 Mapk7 protein_coding protein_coding MGP_BALBcJ_T0029499.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59489491 59490971 - MGP_BALBcJ_P0029499 Mapk7 protein_coding protein_coding MGP_BALBcJ_T0029500.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491334 59493738 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029501.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491588 59494299 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029502.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491610 59494299 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029503.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491628 59494439 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029504.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491638 59494299 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029505.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491638 59494221 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0029506.1 MGP_BALBcJ_G0018380.1 mouse_genomes_project 11 59491674 59494221 - Mapk7 protein_coding processed_transcript MGP_BALBcJ_T0006150.1 MGP_BALBcJ_G0005138.1 mouse_genomes_project 11 15608217 15710678 - Gm12023 lincRNA lincRNA MGP_BALBcJ_T0012702.1 MGP_BALBcJ_G0010799.1 mouse_genomes_project 11 95024185 95025608 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003261.1 MGP_BALBcJ_G0003013.1 mouse_genomes_project 11 95959734 95960420 + Gm11583 antisense antisense MGP_BALBcJ_T0012563.1 MGP_BALBcJ_G0010660.1 mouse_genomes_project 11 46070572 46072181 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028016.1 MGP_BALBcJ_G0017983.1 mouse_genomes_project 11 8118448 8263198 + MGP_BALBcJ_P0028016 Vwc2 protein_coding protein_coding MGP_BALBcJ_T0028017.1 MGP_BALBcJ_G0017983.1 mouse_genomes_project 11 8118969 8268604 + MGP_BALBcJ_P0028017 Vwc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028018.1 MGP_BALBcJ_G0017983.1 mouse_genomes_project 11 8120076 8266311 + MGP_BALBcJ_P0028018 Vwc2 protein_coding protein_coding MGP_BALBcJ_T0028019.1 MGP_BALBcJ_G0017983.1 mouse_genomes_project 11 8120710 8132357 + Vwc2 protein_coding processed_transcript MGP_BALBcJ_T0031123.1 MGP_BALBcJ_G0018759.1 mouse_genomes_project 11 80297069 80302815 + 5530401A14Rik protein_coding processed_transcript MGP_BALBcJ_T0031124.1 MGP_BALBcJ_G0018759.1 mouse_genomes_project 11 80297075 80330940 + MGP_BALBcJ_P0031124 5530401A14Rik protein_coding protein_coding MGP_BALBcJ_T0009664.1 MGP_BALBcJ_G0007789.1 mouse_genomes_project 11 58708623 58708687 + Mir5100 miRNA miRNA MGP_BALBcJ_T0017118.1 MGP_BALBcJ_G0015090.1 mouse_genomes_project 11 8637204 8680541 - Gm11999 processed_transcript processed_transcript MGP_BALBcJ_T0033305.1 MGP_BALBcJ_G0019312.1 mouse_genomes_project 11 114257229 114268196 - MGP_BALBcJ_P0033305 protein_coding protein_coding MGP_BALBcJ_T0029956.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782433 67788380 - MGP_BALBcJ_P0029956 Mpdu1 protein_coding protein_coding MGP_BALBcJ_T0029957.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782697 67788302 - MGP_BALBcJ_P0029957 Mpdu1 protein_coding protein_coding MGP_BALBcJ_T0029958.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782763 67788325 - MGP_BALBcJ_P0029958 Mpdu1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029959.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782865 67784017 - Mpdu1 protein_coding retained_intron MGP_BALBcJ_T0029960.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782890 67788325 - MGP_BALBcJ_P0029960 Mpdu1 protein_coding protein_coding MGP_BALBcJ_T0029961.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782898 67788256 - MGP_BALBcJ_P0029961 Mpdu1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029962.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67782949 67783990 - Mpdu1 protein_coding retained_intron MGP_BALBcJ_T0029963.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67783469 67788242 - Mpdu1 protein_coding retained_intron MGP_BALBcJ_T0029964.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67784083 67788298 - Mpdu1 protein_coding retained_intron MGP_BALBcJ_T0029965.1 MGP_BALBcJ_G0018484.1 mouse_genomes_project 11 67784212 67785142 - Mpdu1 protein_coding retained_intron MGP_BALBcJ_T0033718.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116421754 116591361 + MGP_BALBcJ_P0033718 Sept9 protein_coding protein_coding MGP_BALBcJ_T0033719.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116458161 116591349 + MGP_BALBcJ_P0033719 Sept9 protein_coding protein_coding MGP_BALBcJ_T0033720.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116492967 116591356 + MGP_BALBcJ_P0033720 Sept9 protein_coding protein_coding MGP_BALBcJ_T0033721.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116536972 116581248 + MGP_BALBcJ_P0033721 Sept9 protein_coding protein_coding MGP_BALBcJ_T0033722.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116555229 116585412 + MGP_BALBcJ_P0033722 Sept9 protein_coding protein_coding MGP_BALBcJ_T0033723.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116561224 116590665 + Sept9 protein_coding retained_intron MGP_BALBcJ_T0033724.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116582215 116586035 + Sept9 protein_coding retained_intron MGP_BALBcJ_T0033725.1 MGP_BALBcJ_G0019389.1 mouse_genomes_project 11 116588395 116589902 + Sept9 protein_coding retained_intron MGP_BALBcJ_T0034036.1 MGP_BALBcJ_G0019455.1 mouse_genomes_project 11 119857551 119864448 - MGP_BALBcJ_P0034036 Alyref protein_coding protein_coding MGP_BALBcJ_T0034037.1 MGP_BALBcJ_G0019455.1 mouse_genomes_project 11 119860590 119861739 - Alyref protein_coding processed_transcript MGP_BALBcJ_T0034038.1 MGP_BALBcJ_G0019455.1 mouse_genomes_project 11 119861697 119864314 - Alyref protein_coding retained_intron MGP_BALBcJ_T0029046.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51901392 51916694 + MGP_BALBcJ_P0029046 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029047.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902221 51936069 + MGP_BALBcJ_P0029047 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029048.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902260 51930272 + P4ha2 protein_coding retained_intron MGP_BALBcJ_T0029049.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902260 51936069 + MGP_BALBcJ_P0029049 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029050.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902272 51914145 + P4ha2 protein_coding retained_intron MGP_BALBcJ_T0029051.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902272 51936079 + MGP_BALBcJ_P0029051 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029052.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902277 51912824 + MGP_BALBcJ_P0029052 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029053.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902288 51914073 + MGP_BALBcJ_P0029053 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029054.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902365 51914084 + MGP_BALBcJ_P0029054 P4ha2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029055.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51902542 51914084 + MGP_BALBcJ_P0029055 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029056.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51909829 51916784 + MGP_BALBcJ_P0029056 P4ha2 protein_coding protein_coding MGP_BALBcJ_T0029057.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51913530 51922756 + MGP_BALBcJ_P0029057 P4ha2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029058.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51915712 51916784 + P4ha2 protein_coding processed_transcript MGP_BALBcJ_T0029059.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51927182 51928572 + P4ha2 protein_coding retained_intron MGP_BALBcJ_T0029060.1 MGP_BALBcJ_G0018251.1 mouse_genomes_project 11 51930202 51936082 + P4ha2 protein_coding retained_intron MGP_BALBcJ_T0031487.1 MGP_BALBcJ_G0018854.1 mouse_genomes_project 11 86448509 86459128 + MGP_BALBcJ_P0031487 Mks1 protein_coding protein_coding MGP_BALBcJ_T0031488.1 MGP_BALBcJ_G0018854.1 mouse_genomes_project 11 86448521 86454633 + Mks1 protein_coding retained_intron MGP_BALBcJ_T0031489.1 MGP_BALBcJ_G0018854.1 mouse_genomes_project 11 86448969 86454633 + Mks1 protein_coding retained_intron MGP_BALBcJ_T0031490.1 MGP_BALBcJ_G0018854.1 mouse_genomes_project 11 86451871 86452606 + Mks1 protein_coding retained_intron MGP_BALBcJ_T0031491.1 MGP_BALBcJ_G0018854.1 mouse_genomes_project 11 86457258 86458586 + Mks1 protein_coding retained_intron MGP_BALBcJ_T0098466.1 MGP_BALBcJ_G0036520.1 mouse_genomes_project 11 88848887 88849006 - n-R5s72 rRNA rRNA MGP_BALBcJ_T0031183.1 MGP_BALBcJ_G0018778.1 mouse_genomes_project 11 81454057 81489851 - MGP_BALBcJ_P0031183 Slfn8 protein_coding protein_coding MGP_BALBcJ_T0031184.1 MGP_BALBcJ_G0018778.1 mouse_genomes_project 11 81454057 81492310 - MGP_BALBcJ_P0031184 Slfn8 protein_coding protein_coding MGP_BALBcJ_T0028637.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43772969 43777070 + MGP_BALBcJ_P0028637 Med7 protein_coding protein_coding MGP_BALBcJ_T0028638.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43772993 43776976 + MGP_BALBcJ_P0028638 Med7 protein_coding protein_coding MGP_BALBcJ_T0028639.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43772996 43777739 + MGP_BALBcJ_P0028639 Med7 protein_coding protein_coding MGP_BALBcJ_T0028640.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43773005 43778933 + MGP_BALBcJ_P0028640 Med7 protein_coding protein_coding MGP_BALBcJ_T0028641.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43773015 43777312 + MGP_BALBcJ_P0028641 Med7 protein_coding protein_coding MGP_BALBcJ_T0028642.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43773018 43778933 + MGP_BALBcJ_P0028642 Med7 protein_coding protein_coding MGP_BALBcJ_T0028643.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43773022 43777262 + MGP_BALBcJ_P0028643 Med7 protein_coding protein_coding MGP_BALBcJ_T0028644.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43773049 43775987 + Med7 protein_coding processed_transcript MGP_BALBcJ_T0028645.1 MGP_BALBcJ_G0018135.1 mouse_genomes_project 11 43775696 43777190 + MGP_BALBcJ_P0028645 Med7 protein_coding protein_coding MGP_BALBcJ_T0028656.1 MGP_BALBcJ_G0018141.1 mouse_genomes_project 11 44056020 44080580 + MGP_BALBcJ_P0028656 Havcr1 protein_coding protein_coding MGP_BALBcJ_T0028657.1 MGP_BALBcJ_G0018141.1 mouse_genomes_project 11 44065332 44097721 + MGP_BALBcJ_P0028657 Havcr1 protein_coding protein_coding MGP_BALBcJ_T0028658.1 MGP_BALBcJ_G0018141.1 mouse_genomes_project 11 44074840 44097719 + MGP_BALBcJ_P0028658 Havcr1 protein_coding protein_coding MGP_BALBcJ_T0028659.1 MGP_BALBcJ_G0018141.1 mouse_genomes_project 11 44075494 44097721 + MGP_BALBcJ_P0028659 Havcr1 protein_coding protein_coding MGP_BALBcJ_T0003245.1 MGP_BALBcJ_G0003000.1 mouse_genomes_project 11 93763880 93769419 + Gm11513 antisense antisense MGP_BALBcJ_T0012461.1 MGP_BALBcJ_G0010558.1 mouse_genomes_project 11 11477722 11478125 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006202.1 MGP_BALBcJ_G0005183.1 mouse_genomes_project 11 42524397 42578517 + Gm12160 lincRNA lincRNA MGP_BALBcJ_T0012666.1 MGP_BALBcJ_G0010763.1 mouse_genomes_project 11 78302019 78302760 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009638.1 MGP_BALBcJ_G0007763.1 mouse_genomes_project 11 25932096 25932168 + Mir216a miRNA miRNA MGP_BALBcJ_T0012678.1 MGP_BALBcJ_G0010775.1 mouse_genomes_project 11 83643937 83644346 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034232.1 MGP_BALBcJ_G0019495.1 mouse_genomes_project 11 120989680 121003199 + MGP_BALBcJ_P0034232 Metrnl protein_coding protein_coding MGP_BALBcJ_T0034233.1 MGP_BALBcJ_G0019495.1 mouse_genomes_project 11 120989902 121002972 + MGP_BALBcJ_P0034233 Metrnl protein_coding protein_coding MGP_BALBcJ_T0030028.1 MGP_BALBcJ_G0018501.1 mouse_genomes_project 11 67994958 67999619 + MGP_BALBcJ_P0030028 Plscr3 protein_coding protein_coding MGP_BALBcJ_T0030029.1 MGP_BALBcJ_G0018501.1 mouse_genomes_project 11 67995199 68000641 + MGP_BALBcJ_P0030029 Plscr3 protein_coding protein_coding MGP_BALBcJ_T0030030.1 MGP_BALBcJ_G0018501.1 mouse_genomes_project 11 67995199 67996958 + MGP_BALBcJ_P0030030 Plscr3 protein_coding protein_coding MGP_BALBcJ_T0030031.1 MGP_BALBcJ_G0018501.1 mouse_genomes_project 11 67995258 67999626 + MGP_BALBcJ_P0030031 Plscr3 protein_coding protein_coding MGP_BALBcJ_T0099298.1 MGP_BALBcJ_G0037334.1 mouse_genomes_project 11 104098001 104098106 + Gm25362 snRNA snRNA MGP_BALBcJ_T0032379.1 MGP_BALBcJ_G0019116.1 mouse_genomes_project 11 99907074 99921225 - MGP_BALBcJ_P0032379 Ptrf protein_coding protein_coding MGP_BALBcJ_T0032380.1 MGP_BALBcJ_G0019116.1 mouse_genomes_project 11 99914744 99920889 - Ptrf protein_coding processed_transcript MGP_BALBcJ_T0098309.1 MGP_BALBcJ_G0036363.1 mouse_genomes_project 11 57123884 57124362 - pseudogene pseudogene MGP_BALBcJ_T0030624.1 MGP_BALBcJ_G0018648.1 mouse_genomes_project 11 73581829 73632923 - MGP_BALBcJ_P0030624 Rpa1 protein_coding protein_coding MGP_BALBcJ_T0030625.1 MGP_BALBcJ_G0018648.1 mouse_genomes_project 11 73584013 73632909 - MGP_BALBcJ_P0030625 Rpa1 protein_coding protein_coding MGP_BALBcJ_T0030626.1 MGP_BALBcJ_G0018648.1 mouse_genomes_project 11 73584970 73626506 - Rpa1 protein_coding processed_transcript MGP_BALBcJ_T0030627.1 MGP_BALBcJ_G0018648.1 mouse_genomes_project 11 73600024 73632894 - Rpa1 protein_coding retained_intron MGP_BALBcJ_T0030628.1 MGP_BALBcJ_G0018648.1 mouse_genomes_project 11 73626295 73632892 - Rpa1 protein_coding processed_transcript MGP_BALBcJ_T0028312.1 MGP_BALBcJ_G0018049.1 mouse_genomes_project 11 26742825 26743651 - Rps27a protein_coding processed_transcript MGP_BALBcJ_T0028313.1 MGP_BALBcJ_G0018049.1 mouse_genomes_project 11 26742825 26744840 - MGP_BALBcJ_P0028313 Rps27a protein_coding protein_coding MGP_BALBcJ_T0028314.1 MGP_BALBcJ_G0018049.1 mouse_genomes_project 11 26742825 26745089 - MGP_BALBcJ_P0028314 Rps27a protein_coding protein_coding MGP_BALBcJ_T0028315.1 MGP_BALBcJ_G0018049.1 mouse_genomes_project 11 26742878 26744862 - Rps27a protein_coding processed_transcript MGP_BALBcJ_T0028316.1 MGP_BALBcJ_G0018049.1 mouse_genomes_project 11 26744095 26744871 - Rps27a protein_coding processed_transcript MGP_BALBcJ_T0033142.1 MGP_BALBcJ_G0019271.1 mouse_genomes_project 11 108233074 108238143 - MGP_BALBcJ_P0033142 E030025P04Rik protein_coding protein_coding MGP_BALBcJ_T0029229.1 MGP_BALBcJ_G0018308.1 mouse_genomes_project 11 56530915 56532098 + MGP_BALBcJ_P0029229 Olfr320 protein_coding protein_coding MGP_BALBcJ_T0027889.1 MGP_BALBcJ_G0017952.1 mouse_genomes_project 11 2858908 2861053 - MGP_BALBcJ_P0027889 Myl7 protein_coding protein_coding MGP_BALBcJ_T0031967.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96511872 96522687 - MGP_BALBcJ_P0031967 Pcgf2 protein_coding protein_coding MGP_BALBcJ_T0031968.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96511872 96522483 - MGP_BALBcJ_P0031968 Pcgf2 protein_coding protein_coding MGP_BALBcJ_T0031969.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96512900 96523999 - MGP_BALBcJ_P0031969 Pcgf2 protein_coding protein_coding MGP_BALBcJ_T0031970.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96512900 96522687 - MGP_BALBcJ_P0031970 Pcgf2 protein_coding protein_coding MGP_BALBcJ_T0031971.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96513067 96517095 - MGP_BALBcJ_P0031971 Pcgf2 protein_coding protein_coding MGP_BALBcJ_T0031972.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96513608 96515498 - Pcgf2 protein_coding processed_transcript MGP_BALBcJ_T0031973.1 MGP_BALBcJ_G0018977.1 mouse_genomes_project 11 96520296 96522680 - Pcgf2 protein_coding processed_transcript MGP_BALBcJ_T0012568.1 MGP_BALBcJ_G0010665.1 mouse_genomes_project 11 47677273 47678285 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099237.1 MGP_BALBcJ_G0037273.1 mouse_genomes_project 11 20852025 20852170 - Gm23827 snRNA snRNA MGP_BALBcJ_T0028887.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49214986 49234651 + MGP_BALBcJ_P0028887 Phykpl protein_coding protein_coding MGP_BALBcJ_T0028888.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49214986 49233416 + MGP_BALBcJ_P0028888 Phykpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028889.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49215018 49231490 + MGP_BALBcJ_P0028889 Phykpl protein_coding protein_coding MGP_BALBcJ_T0028890.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49215032 49227172 + Phykpl protein_coding retained_intron MGP_BALBcJ_T0028891.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49215036 49217547 + Phykpl protein_coding retained_intron MGP_BALBcJ_T0028892.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49215040 49223535 + Phykpl protein_coding retained_intron MGP_BALBcJ_T0028893.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49221675 49224110 + Phykpl protein_coding retained_intron MGP_BALBcJ_T0028894.1 MGP_BALBcJ_G0018208.1 mouse_genomes_project 11 49229428 49231229 + Phykpl protein_coding retained_intron MGP_BALBcJ_T0028685.1 MGP_BALBcJ_G0018149.1 mouse_genomes_project 11 46267346 46270569 - MGP_BALBcJ_P0028685 protein_coding protein_coding MGP_BALBcJ_T0030518.1 MGP_BALBcJ_G0018610.1 mouse_genomes_project 11 71813167 71814405 + MGP_BALBcJ_P0030518 Olfr384 protein_coding protein_coding MGP_BALBcJ_T0029209.1 MGP_BALBcJ_G0018297.1 mouse_genomes_project 11 56325962 56328742 - MGP_BALBcJ_P0029209 protein_coding protein_coding MGP_BALBcJ_T0029210.1 MGP_BALBcJ_G0018297.1 mouse_genomes_project 11 56326599 56328756 - MGP_BALBcJ_P0029210 protein_coding protein_coding MGP_BALBcJ_T0033113.1 MGP_BALBcJ_G0019268.1 mouse_genomes_project 11 107429140 107478831 + MGP_BALBcJ_P0033113 Apoh protein_coding protein_coding MGP_BALBcJ_T0033114.1 MGP_BALBcJ_G0019268.1 mouse_genomes_project 11 107467739 107478776 + MGP_BALBcJ_P0033114 Apoh protein_coding protein_coding MGP_BALBcJ_T0033115.1 MGP_BALBcJ_G0019268.1 mouse_genomes_project 11 107467744 107484789 + MGP_BALBcJ_P0033115 Apoh protein_coding protein_coding MGP_BALBcJ_T0033116.1 MGP_BALBcJ_G0019268.1 mouse_genomes_project 11 107478218 107491317 + MGP_BALBcJ_P0033116 Apoh protein_coding protein_coding MGP_BALBcJ_T0032116.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97592780 97605395 + Thra protein_coding processed_transcript MGP_BALBcJ_T0032117.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97592943 97605654 + Thra protein_coding processed_transcript MGP_BALBcJ_T0032118.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97593046 97605458 + Thra protein_coding processed_transcript MGP_BALBcJ_T0032119.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97593953 97609900 + Thra protein_coding processed_transcript MGP_BALBcJ_T0032120.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97593953 97621576 + MGP_BALBcJ_P0032120 Thra protein_coding protein_coding MGP_BALBcJ_T0032121.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97594015 97617675 + MGP_BALBcJ_P0032121 Thra protein_coding protein_coding MGP_BALBcJ_T0032122.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97594300 97609200 + MGP_BALBcJ_P0032122 Thra protein_coding protein_coding MGP_BALBcJ_T0032123.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97596375 97605793 + Thra protein_coding processed_transcript MGP_BALBcJ_T0032124.1 MGP_BALBcJ_G0019013.1 mouse_genomes_project 11 97605601 97620973 + MGP_BALBcJ_P0032124 Thra protein_coding protein_coding MGP_BALBcJ_T0027864.1 MGP_BALBcJ_G0017945.1 mouse_genomes_project 11 2659323 2663030 - MGP_BALBcJ_P0027864 Mrps24 protein_coding protein_coding MGP_BALBcJ_T0027865.1 MGP_BALBcJ_G0017945.1 mouse_genomes_project 11 2659669 2663010 - Mrps24 protein_coding retained_intron MGP_BALBcJ_T0027866.1 MGP_BALBcJ_G0017945.1 mouse_genomes_project 11 2659866 2670940 - Mrps24 protein_coding processed_transcript MGP_BALBcJ_T0027867.1 MGP_BALBcJ_G0017945.1 mouse_genomes_project 11 2659898 2663033 - Mrps24 protein_coding retained_intron MGP_BALBcJ_T0027868.1 MGP_BALBcJ_G0017945.1 mouse_genomes_project 11 2660003 2662985 - Mrps24 protein_coding retained_intron MGP_BALBcJ_T0032567.1 MGP_BALBcJ_G0019156.1 mouse_genomes_project 11 100957805 100962363 - MGP_BALBcJ_P0032567 Sost protein_coding protein_coding MGP_BALBcJ_T0009740.1 MGP_BALBcJ_G0007865.1 mouse_genomes_project 11 114668626 114668726 - Mir3968 miRNA miRNA MGP_BALBcJ_T0032822.1 MGP_BALBcJ_G0019201.1 mouse_genomes_project 11 102214468 102218387 - MGP_BALBcJ_P0032822 1700023F06Rik protein_coding protein_coding MGP_BALBcJ_T0032823.1 MGP_BALBcJ_G0019201.1 mouse_genomes_project 11 102214488 102224045 - MGP_BALBcJ_P0032823 1700023F06Rik protein_coding protein_coding MGP_BALBcJ_T0032824.1 MGP_BALBcJ_G0019201.1 mouse_genomes_project 11 102214960 102224019 - MGP_BALBcJ_P0032824 1700023F06Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032825.1 MGP_BALBcJ_G0019201.1 mouse_genomes_project 11 102215869 102224020 - MGP_BALBcJ_P0032825 1700023F06Rik protein_coding protein_coding MGP_BALBcJ_T0032826.1 MGP_BALBcJ_G0019201.1 mouse_genomes_project 11 102216249 102224045 - 1700023F06Rik protein_coding retained_intron MGP_BALBcJ_T0029489.1 MGP_BALBcJ_G0018379.1 mouse_genomes_project 11 59485448 59488933 + MGP_BALBcJ_P0029489 Mfap4 protein_coding protein_coding MGP_BALBcJ_T0029490.1 MGP_BALBcJ_G0018379.1 mouse_genomes_project 11 59485478 59488108 + MGP_BALBcJ_P0029490 Mfap4 protein_coding protein_coding MGP_BALBcJ_T0029491.1 MGP_BALBcJ_G0018379.1 mouse_genomes_project 11 59485508 59486970 + Mfap4 protein_coding processed_transcript MGP_BALBcJ_T0029492.1 MGP_BALBcJ_G0018379.1 mouse_genomes_project 11 59485533 59488933 + Mfap4 protein_coding processed_transcript MGP_BALBcJ_T0100534.1 MGP_BALBcJ_G0038570.1 mouse_genomes_project 11 81813221 81813318 + Snord7 snoRNA snoRNA MGP_BALBcJ_T0003145.1 MGP_BALBcJ_G0002920.1 mouse_genomes_project 11 50861048 50870478 - Gm11186 antisense antisense MGP_BALBcJ_T0031052.1 MGP_BALBcJ_G0018743.1 mouse_genomes_project 11 78396410 78442071 + MGP_BALBcJ_P0031052 Suz12 protein_coding protein_coding MGP_BALBcJ_T0031053.1 MGP_BALBcJ_G0018743.1 mouse_genomes_project 11 78396410 78442072 + MGP_BALBcJ_P0031053 Suz12 protein_coding protein_coding MGP_BALBcJ_T0031054.1 MGP_BALBcJ_G0018743.1 mouse_genomes_project 11 78398890 78405722 + Suz12 protein_coding retained_intron MGP_BALBcJ_T0031055.1 MGP_BALBcJ_G0018743.1 mouse_genomes_project 11 78398921 78420879 + Suz12 protein_coding retained_intron MGP_BALBcJ_T0031056.1 MGP_BALBcJ_G0018743.1 mouse_genomes_project 11 78399095 78420809 + MGP_BALBcJ_P0031056 Suz12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031057.1 MGP_BALBcJ_G0018743.1 mouse_genomes_project 11 78432296 78439950 + MGP_BALBcJ_P0031057 Suz12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034082.1 MGP_BALBcJ_G0019463.1 mouse_genomes_project 11 119923133 119929972 - MGP_BALBcJ_P0034082 Notum protein_coding protein_coding MGP_BALBcJ_T0034083.1 MGP_BALBcJ_G0019463.1 mouse_genomes_project 11 119923133 119930195 - MGP_BALBcJ_P0034083 Notum protein_coding protein_coding MGP_BALBcJ_T0034084.1 MGP_BALBcJ_G0019463.1 mouse_genomes_project 11 119923190 119927410 - Notum protein_coding retained_intron MGP_BALBcJ_T0034085.1 MGP_BALBcJ_G0019463.1 mouse_genomes_project 11 119926928 119930541 - MGP_BALBcJ_P0034085 Notum protein_coding protein_coding MGP_BALBcJ_T0029139.1 MGP_BALBcJ_G0018271.1 mouse_genomes_project 11 53257661 53272430 - MGP_BALBcJ_P0029139 Atox1 protein_coding protein_coding MGP_BALBcJ_T0029140.1 MGP_BALBcJ_G0018271.1 mouse_genomes_project 11 53257664 53272388 - Atox1 protein_coding processed_transcript MGP_BALBcJ_T0034120.1 MGP_BALBcJ_G0019468.1 mouse_genomes_project 11 119995268 119997617 - MGP_BALBcJ_P0034120 Dcxr protein_coding protein_coding MGP_BALBcJ_T0034121.1 MGP_BALBcJ_G0019468.1 mouse_genomes_project 11 119995268 119997579 - MGP_BALBcJ_P0034121 Dcxr protein_coding protein_coding MGP_BALBcJ_T0034122.1 MGP_BALBcJ_G0019468.1 mouse_genomes_project 11 119995294 119997580 - Dcxr protein_coding retained_intron MGP_BALBcJ_T0034123.1 MGP_BALBcJ_G0019468.1 mouse_genomes_project 11 119995324 119997565 - Dcxr protein_coding processed_transcript MGP_BALBcJ_T0031822.1 MGP_BALBcJ_G0018942.1 mouse_genomes_project 11 95051601 95056741 + MGP_BALBcJ_P0031822 Hoxb9 protein_coding protein_coding MGP_BALBcJ_T0031823.1 MGP_BALBcJ_G0018942.1 mouse_genomes_project 11 95051667 95056741 + MGP_BALBcJ_P0031823 Hoxb9 protein_coding protein_coding MGP_BALBcJ_T0032773.1 MGP_BALBcJ_G0019190.1 mouse_genomes_project 11 101905435 101906998 + MGP_BALBcJ_P0032773 Fam187a protein_coding protein_coding MGP_BALBcJ_T0031166.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81353960 81361597 - MGP_BALBcJ_P0031166 Nle1 protein_coding protein_coding MGP_BALBcJ_T0031167.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81353964 81355009 - Nle1 protein_coding retained_intron MGP_BALBcJ_T0031168.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81353972 81357482 - MGP_BALBcJ_P0031168 Nle1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031169.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81354931 81357461 - Nle1 protein_coding retained_intron MGP_BALBcJ_T0031170.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81357298 81357829 - Nle1 protein_coding retained_intron MGP_BALBcJ_T0031171.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81357984 81360873 - MGP_BALBcJ_P0031171 Nle1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031172.1 MGP_BALBcJ_G0018774.1 mouse_genomes_project 11 81358114 81361528 - Nle1 protein_coding retained_intron MGP_BALBcJ_T0012443.1 MGP_BALBcJ_G0010540.1 mouse_genomes_project 11 3426780 3427068 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006293.1 MGP_BALBcJ_G0005251.1 mouse_genomes_project 11 93956100 93958443 - Gm11515 lincRNA lincRNA MGP_BALBcJ_T0029418.1 MGP_BALBcJ_G0018364.1 mouse_genomes_project 11 58720018 58757807 - MGP_BALBcJ_P0029418 Top3a protein_coding protein_coding MGP_BALBcJ_T0029419.1 MGP_BALBcJ_G0018364.1 mouse_genomes_project 11 58720019 58757729 - MGP_BALBcJ_P0029419 Top3a protein_coding protein_coding MGP_BALBcJ_T0029420.1 MGP_BALBcJ_G0018364.1 mouse_genomes_project 11 58721851 58757707 - MGP_BALBcJ_P0029420 Top3a protein_coding protein_coding MGP_BALBcJ_T0029421.1 MGP_BALBcJ_G0018364.1 mouse_genomes_project 11 58722194 58757706 - MGP_BALBcJ_P0029421 Top3a protein_coding protein_coding MGP_BALBcJ_T0029422.1 MGP_BALBcJ_G0018364.1 mouse_genomes_project 11 58729417 58732639 - Top3a protein_coding retained_intron MGP_BALBcJ_T0029423.1 MGP_BALBcJ_G0018364.1 mouse_genomes_project 11 58742227 58757741 - MGP_BALBcJ_P0029423 Top3a protein_coding protein_coding MGP_BALBcJ_T0032240.1 MGP_BALBcJ_G0019080.1 mouse_genomes_project 11 99003507 99008099 - Krt32 protein_coding processed_transcript MGP_BALBcJ_T0032241.1 MGP_BALBcJ_G0019080.1 mouse_genomes_project 11 99003516 99010883 - MGP_BALBcJ_P0032241 Krt32 protein_coding protein_coding MGP_BALBcJ_T0031281.1 MGP_BALBcJ_G0018810.1 mouse_genomes_project 11 83056333 83063585 - MGP_BALBcJ_P0031281 Lhx1 protein_coding protein_coding MGP_BALBcJ_T0031282.1 MGP_BALBcJ_G0018810.1 mouse_genomes_project 11 83057491 83060381 - MGP_BALBcJ_P0031282 Lhx1 protein_coding protein_coding MGP_BALBcJ_T0031283.1 MGP_BALBcJ_G0018810.1 mouse_genomes_project 11 83057755 83060117 - Lhx1 protein_coding retained_intron MGP_BALBcJ_T0031284.1 MGP_BALBcJ_G0018810.1 mouse_genomes_project 11 83059945 83060761 - MGP_BALBcJ_P0031284 Lhx1 protein_coding protein_coding MGP_BALBcJ_T0012706.1 MGP_BALBcJ_G0010803.1 mouse_genomes_project 11 95895997 95896391 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012595.1 MGP_BALBcJ_G0010692.1 mouse_genomes_project 11 55923749 55924417 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098463.1 MGP_BALBcJ_G0036517.1 mouse_genomes_project 11 82292124 82292234 - Gm22311 rRNA rRNA MGP_BALBcJ_T0032884.1 MGP_BALBcJ_G0019217.1 mouse_genomes_project 11 103340949 103450769 - MGP_BALBcJ_P0032884 Kansl1 protein_coding protein_coding MGP_BALBcJ_T0032885.1 MGP_BALBcJ_G0019217.1 mouse_genomes_project 11 103341221 103450769 - MGP_BALBcJ_P0032885 Kansl1 protein_coding protein_coding MGP_BALBcJ_T0032886.1 MGP_BALBcJ_G0019217.1 mouse_genomes_project 11 103341221 103477757 - MGP_BALBcJ_P0032886 Kansl1 protein_coding protein_coding MGP_BALBcJ_T0032887.1 MGP_BALBcJ_G0019217.1 mouse_genomes_project 11 103341265 103450176 - MGP_BALBcJ_P0032887 Kansl1 protein_coding protein_coding MGP_BALBcJ_T0032888.1 MGP_BALBcJ_G0019217.1 mouse_genomes_project 11 103342641 103348964 - Kansl1 protein_coding processed_transcript MGP_BALBcJ_T0032889.1 MGP_BALBcJ_G0019217.1 mouse_genomes_project 11 103433415 103476887 - MGP_BALBcJ_P0032889 Kansl1 protein_coding protein_coding MGP_BALBcJ_T0012528.1 MGP_BALBcJ_G0010625.1 mouse_genomes_project 11 28145528 28146508 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012475.1 MGP_BALBcJ_G0010572.1 mouse_genomes_project 11 15340931 15342950 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034112.1 MGP_BALBcJ_G0019466.1 mouse_genomes_project 11 119983804 119990998 + MGP_BALBcJ_P0034112 Lrrc45 protein_coding protein_coding MGP_BALBcJ_T0034113.1 MGP_BALBcJ_G0019466.1 mouse_genomes_project 11 119983830 119990993 + MGP_BALBcJ_P0034113 Lrrc45 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034114.1 MGP_BALBcJ_G0019466.1 mouse_genomes_project 11 119983857 119985434 + MGP_BALBcJ_P0034114 Lrrc45 protein_coding protein_coding MGP_BALBcJ_T0034115.1 MGP_BALBcJ_G0019466.1 mouse_genomes_project 11 119987394 119989846 + Lrrc45 protein_coding retained_intron MGP_BALBcJ_T0034116.1 MGP_BALBcJ_G0019466.1 mouse_genomes_project 11 119989604 119990782 + Lrrc45 protein_coding retained_intron MGP_BALBcJ_T0032260.1 MGP_BALBcJ_G0019091.1 mouse_genomes_project 11 99249621 99250402 + MGP_BALBcJ_P0032260 Eif1 protein_coding protein_coding MGP_BALBcJ_T0032261.1 MGP_BALBcJ_G0019091.1 mouse_genomes_project 11 99249727 99251548 + MGP_BALBcJ_P0032261 Eif1 protein_coding protein_coding MGP_BALBcJ_T0032262.1 MGP_BALBcJ_G0019091.1 mouse_genomes_project 11 99249930 99250762 + Eif1 protein_coding processed_transcript MGP_BALBcJ_T0032263.1 MGP_BALBcJ_G0019091.1 mouse_genomes_project 11 99250120 99251201 + MGP_BALBcJ_P0032263 Eif1 protein_coding protein_coding MGP_BALBcJ_T0003238.1 MGP_BALBcJ_G0002996.1 mouse_genomes_project 11 86990630 86998322 + Gm15893 antisense antisense MGP_BALBcJ_T0027793.1 MGP_BALBcJ_G0017932.1 mouse_genomes_project 11 1823001 1856898 + MGP_BALBcJ_P0027793 Thoc5 protein_coding protein_coding MGP_BALBcJ_T0027794.1 MGP_BALBcJ_G0017932.1 mouse_genomes_project 11 1823024 1856896 + MGP_BALBcJ_P0027794 Thoc5 protein_coding protein_coding MGP_BALBcJ_T0027795.1 MGP_BALBcJ_G0017932.1 mouse_genomes_project 11 1830204 1842055 + Thoc5 protein_coding processed_transcript MGP_BALBcJ_T0027796.1 MGP_BALBcJ_G0017932.1 mouse_genomes_project 11 1830204 1832459 + Thoc5 protein_coding processed_transcript MGP_BALBcJ_T0027797.1 MGP_BALBcJ_G0017932.1 mouse_genomes_project 11 1830204 1845984 + MGP_BALBcJ_P0027797 Thoc5 protein_coding protein_coding MGP_BALBcJ_T0027798.1 MGP_BALBcJ_G0017932.1 mouse_genomes_project 11 1843050 1848499 + Thoc5 protein_coding processed_transcript MGP_BALBcJ_T0029122.1 MGP_BALBcJ_G0018266.1 mouse_genomes_project 11 52938768 52965823 - MGP_BALBcJ_P0029122 Slc36a3 protein_coding protein_coding MGP_BALBcJ_T0029123.1 MGP_BALBcJ_G0018266.1 mouse_genomes_project 11 52938778 52965801 - MGP_BALBcJ_P0029123 Slc36a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029124.1 MGP_BALBcJ_G0018266.1 mouse_genomes_project 11 52963605 52965823 - MGP_BALBcJ_P0029124 Slc36a3 protein_coding protein_coding MGP_BALBcJ_T0031833.1 MGP_BALBcJ_G0018947.1 mouse_genomes_project 11 95102550 95105921 + MGP_BALBcJ_P0031833 Hoxb4 protein_coding protein_coding MGP_BALBcJ_T0030692.1 MGP_BALBcJ_G0018661.1 mouse_genomes_project 11 73979279 74005551 + MGP_BALBcJ_P0030692 Crk protein_coding protein_coding MGP_BALBcJ_T0030693.1 MGP_BALBcJ_G0018661.1 mouse_genomes_project 11 73979304 74006394 + MGP_BALBcJ_P0030693 Crk protein_coding protein_coding MGP_BALBcJ_T0030694.1 MGP_BALBcJ_G0018661.1 mouse_genomes_project 11 73979304 74003142 + MGP_BALBcJ_P0030694 Crk protein_coding protein_coding MGP_BALBcJ_T0030695.1 MGP_BALBcJ_G0018661.1 mouse_genomes_project 11 73979331 74000276 + MGP_BALBcJ_P0030695 Crk protein_coding protein_coding MGP_BALBcJ_T0030696.1 MGP_BALBcJ_G0018661.1 mouse_genomes_project 11 73979562 74000224 + MGP_BALBcJ_P0030696 Crk protein_coding protein_coding MGP_BALBcJ_T0031218.1 MGP_BALBcJ_G0018790.1 mouse_genomes_project 11 81994261 82010279 + Taf15 protein_coding processed_transcript MGP_BALBcJ_T0031219.1 MGP_BALBcJ_G0018790.1 mouse_genomes_project 11 81994267 82027289 + MGP_BALBcJ_P0031219 Taf15 protein_coding protein_coding MGP_BALBcJ_T0031220.1 MGP_BALBcJ_G0018790.1 mouse_genomes_project 11 81994286 82003617 + Taf15 protein_coding retained_intron MGP_BALBcJ_T0031221.1 MGP_BALBcJ_G0018790.1 mouse_genomes_project 11 81994290 82010111 + Taf15 protein_coding processed_transcript MGP_BALBcJ_T0031222.1 MGP_BALBcJ_G0018790.1 mouse_genomes_project 11 82010092 82027289 + MGP_BALBcJ_P0031222 Taf15 protein_coding protein_coding MGP_BALBcJ_T0006206.1 MGP_BALBcJ_G0005186.1 mouse_genomes_project 11 43922717 43923810 - lincRNA lincRNA MGP_BALBcJ_T0017224.1 MGP_BALBcJ_G0015152.1 mouse_genomes_project 11 106599790 106620515 - A830035A12Rik processed_transcript processed_transcript MGP_BALBcJ_T0029944.1 MGP_BALBcJ_G0018480.1 mouse_genomes_project 11 67739163 67742265 - MGP_BALBcJ_P0029944 Shbg protein_coding protein_coding MGP_BALBcJ_T0029945.1 MGP_BALBcJ_G0018480.1 mouse_genomes_project 11 67740007 67741300 - Shbg protein_coding processed_transcript MGP_BALBcJ_T0017132.1 MGP_BALBcJ_G0015097.1 mouse_genomes_project 11 20567029 20567927 + 1700030C12Rik processed_transcript processed_transcript MGP_BALBcJ_T0017133.1 MGP_BALBcJ_G0015097.1 mouse_genomes_project 11 20567033 20568943 + 1700030C12Rik processed_transcript processed_transcript MGP_BALBcJ_T0017134.1 MGP_BALBcJ_G0015097.1 mouse_genomes_project 11 20567059 20568474 + 1700030C12Rik processed_transcript processed_transcript MGP_BALBcJ_T0017135.1 MGP_BALBcJ_G0015097.1 mouse_genomes_project 11 20568132 20568926 + 1700030C12Rik processed_transcript processed_transcript MGP_BALBcJ_T0009637.1 MGP_BALBcJ_G0007762.1 mouse_genomes_project 11 25920829 25920898 - Mir216c miRNA miRNA MGP_BALBcJ_T0029042.1 MGP_BALBcJ_G0018250.1 mouse_genomes_project 11 51852833 51866834 - MGP_BALBcJ_P0029042 Pdlim4 protein_coding protein_coding MGP_BALBcJ_T0029043.1 MGP_BALBcJ_G0018250.1 mouse_genomes_project 11 51853826 51862701 - MGP_BALBcJ_P0029043 Pdlim4 protein_coding protein_coding MGP_BALBcJ_T0029044.1 MGP_BALBcJ_G0018250.1 mouse_genomes_project 11 51856855 51866893 - Pdlim4 protein_coding retained_intron MGP_BALBcJ_T0029045.1 MGP_BALBcJ_G0018250.1 mouse_genomes_project 11 51861627 51862473 - Pdlim4 protein_coding processed_transcript MGP_BALBcJ_T0012586.1 MGP_BALBcJ_G0010683.1 mouse_genomes_project 11 52756817 52757271 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009745.1 MGP_BALBcJ_G0007870.1 mouse_genomes_project 11 118105412 118105482 - Gm25040 miRNA miRNA MGP_BALBcJ_T0012557.1 MGP_BALBcJ_G0010654.1 mouse_genomes_project 11 43364751 43365093 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028740.1 MGP_BALBcJ_G0018166.1 mouse_genomes_project 11 46980657 46981593 + MGP_BALBcJ_P0028740 Olfr1388 protein_coding protein_coding MGP_BALBcJ_T0029606.1 MGP_BALBcJ_G0018397.1 mouse_genomes_project 11 60588839 60615068 + Trpv2 protein_coding processed_transcript MGP_BALBcJ_T0029607.1 MGP_BALBcJ_G0018397.1 mouse_genomes_project 11 60588891 60615941 + MGP_BALBcJ_P0029607 Trpv2 protein_coding protein_coding MGP_BALBcJ_T0029608.1 MGP_BALBcJ_G0018397.1 mouse_genomes_project 11 60589900 60595626 + Trpv2 protein_coding processed_transcript MGP_BALBcJ_T0029609.1 MGP_BALBcJ_G0018397.1 mouse_genomes_project 11 60590478 60615068 + MGP_BALBcJ_P0029609 Trpv2 protein_coding protein_coding MGP_BALBcJ_T0029610.1 MGP_BALBcJ_G0018397.1 mouse_genomes_project 11 60595588 60615068 + Trpv2 protein_coding processed_transcript MGP_BALBcJ_T0100485.1 MGP_BALBcJ_G0038521.1 mouse_genomes_project 11 3607221 3607357 - Snora5c snoRNA snoRNA MGP_BALBcJ_T0029467.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59218148 59262761 - MGP_BALBcJ_P0029467 Aldh3a2 protein_coding protein_coding MGP_BALBcJ_T0029468.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59240739 59262582 - MGP_BALBcJ_P0029468 Aldh3a2 protein_coding unknown_likely_coding MGP_BALBcJ_T0029469.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59240748 59262761 - MGP_BALBcJ_P0029469 Aldh3a2 protein_coding protein_coding MGP_BALBcJ_T0029470.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59243422 59262761 - MGP_BALBcJ_P0029470 Aldh3a2 protein_coding protein_coding MGP_BALBcJ_T0029471.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59244967 59257911 - Aldh3a2 protein_coding processed_transcript MGP_BALBcJ_T0029472.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59252730 59263040 - Aldh3a2 protein_coding processed_transcript MGP_BALBcJ_T0029473.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59259745 59262703 - Aldh3a2 protein_coding processed_transcript MGP_BALBcJ_T0029474.1 MGP_BALBcJ_G0018375.1 mouse_genomes_project 11 59260799 59263017 - Aldh3a2 protein_coding processed_transcript MGP_BALBcJ_T0100491.1 MGP_BALBcJ_G0038527.1 mouse_genomes_project 11 17888288 17888417 - Gm22807 snoRNA snoRNA MGP_BALBcJ_T0030744.1 MGP_BALBcJ_G0018673.1 mouse_genomes_project 11 74585177 74727737 - MGP_BALBcJ_P0030744 Nxn protein_coding protein_coding MGP_BALBcJ_T0030745.1 MGP_BALBcJ_G0018673.1 mouse_genomes_project 11 74686666 74727665 - Nxn protein_coding processed_transcript MGP_BALBcJ_T0012572.1 MGP_BALBcJ_G0010669.1 mouse_genomes_project 11 49855182 49855369 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031736.1 MGP_BALBcJ_G0018917.1 mouse_genomes_project 11 93775590 93800077 - MGP_BALBcJ_P0031736 Itga3 protein_coding protein_coding MGP_BALBcJ_T0031737.1 MGP_BALBcJ_G0018917.1 mouse_genomes_project 11 93775590 93807586 - MGP_BALBcJ_P0031737 Itga3 protein_coding protein_coding MGP_BALBcJ_T0031738.1 MGP_BALBcJ_G0018917.1 mouse_genomes_project 11 93775590 93807673 - MGP_BALBcJ_P0031738 Itga3 protein_coding protein_coding MGP_BALBcJ_T0031739.1 MGP_BALBcJ_G0018917.1 mouse_genomes_project 11 93784314 93787197 - Itga3 protein_coding retained_intron MGP_BALBcJ_T0031740.1 MGP_BALBcJ_G0018917.1 mouse_genomes_project 11 93789266 93793145 - Itga3 protein_coding retained_intron MGP_BALBcJ_T0031741.1 MGP_BALBcJ_G0018917.1 mouse_genomes_project 11 93794034 93807669 - MGP_BALBcJ_P0031741 Itga3 protein_coding protein_coding MGP_BALBcJ_T0029099.1 MGP_BALBcJ_G0018260.1 mouse_genomes_project 11 52674764 52678881 + MGP_BALBcJ_P0029099 Hint1 protein_coding protein_coding MGP_BALBcJ_T0029100.1 MGP_BALBcJ_G0018260.1 mouse_genomes_project 11 52674862 52678687 + MGP_BALBcJ_P0029100 Hint1 protein_coding protein_coding MGP_BALBcJ_T0028092.1 MGP_BALBcJ_G0018000.1 mouse_genomes_project 11 14274791 14280126 + C1d protein_coding processed_transcript MGP_BALBcJ_T0028093.1 MGP_BALBcJ_G0018000.1 mouse_genomes_project 11 14274804 14281510 + C1d protein_coding processed_transcript MGP_BALBcJ_T0028094.1 MGP_BALBcJ_G0018000.1 mouse_genomes_project 11 14274806 14286392 + MGP_BALBcJ_P0028094 C1d protein_coding protein_coding MGP_BALBcJ_T0028095.1 MGP_BALBcJ_G0018000.1 mouse_genomes_project 11 14274900 14283840 + MGP_BALBcJ_P0028095 C1d protein_coding protein_coding MGP_BALBcJ_T0028096.1 MGP_BALBcJ_G0018000.1 mouse_genomes_project 11 14280836 14283776 + C1d protein_coding processed_transcript MGP_BALBcJ_T0030305.1 MGP_BALBcJ_G0018555.1 mouse_genomes_project 11 68928727 68939383 + MGP_BALBcJ_P0030305 Zfp3 protein_coding protein_coding MGP_BALBcJ_T0012768.1 MGP_BALBcJ_G0010865.1 mouse_genomes_project 11 120455578 120456039 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009653.1 MGP_BALBcJ_G0007778.1 mouse_genomes_project 11 49739965 49740076 - Gm24157 miRNA miRNA MGP_BALBcJ_T0030827.1 MGP_BALBcJ_G0018691.1 mouse_genomes_project 11 75848349 75850887 - MGP_BALBcJ_P0030827 Gm10392 protein_coding protein_coding MGP_BALBcJ_T0027772.1 MGP_BALBcJ_G0017928.1 mouse_genomes_project 11 1629539 1663307 + MGP_BALBcJ_P0027772 Zmat5 protein_coding unknown_likely_coding MGP_BALBcJ_T0027773.1 MGP_BALBcJ_G0017928.1 mouse_genomes_project 11 1629609 1663241 + Zmat5 protein_coding processed_transcript MGP_BALBcJ_T0027774.1 MGP_BALBcJ_G0017928.1 mouse_genomes_project 11 1654437 1658374 + Zmat5 protein_coding processed_transcript MGP_BALBcJ_T0028087.1 MGP_BALBcJ_G0017998.1 mouse_genomes_project 11 14198007 14249467 + Wdr92 protein_coding processed_transcript MGP_BALBcJ_T0028091.1 MGP_BALBcJ_G0017998.1 mouse_genomes_project 11 14227614 14250351 + MGP_BALBcJ_P0028091 Wdr92 protein_coding protein_coding MGP_BALBcJ_T0003119.1 MGP_BALBcJ_G0002895.1 mouse_genomes_project 11 25522074 25526040 + Gm12081 antisense antisense MGP_BALBcJ_T0028993.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51278449 51293906 + MGP_BALBcJ_P0028993 Sept8 protein_coding protein_coding MGP_BALBcJ_T0028994.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51278938 51302516 + MGP_BALBcJ_P0028994 Sept8 protein_coding protein_coding MGP_BALBcJ_T0028995.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51278962 51307986 + MGP_BALBcJ_P0028995 Sept8 protein_coding protein_coding MGP_BALBcJ_T0028996.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51278992 51302517 + MGP_BALBcJ_P0028996 Sept8 protein_coding protein_coding MGP_BALBcJ_T0028997.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51279100 51300319 + MGP_BALBcJ_P0028997 Sept8 protein_coding protein_coding MGP_BALBcJ_T0028998.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51279119 51300268 + MGP_BALBcJ_P0028998 Sept8 protein_coding protein_coding MGP_BALBcJ_T0028999.1 MGP_BALBcJ_G0018238.1 mouse_genomes_project 11 51291246 51296569 + Sept8 protein_coding processed_transcript MGP_BALBcJ_T0012614.1 MGP_BALBcJ_G0010711.1 mouse_genomes_project 11 59980489 59980874 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030814.1 MGP_BALBcJ_G0018688.1 mouse_genomes_project 11 75823881 75838704 + MGP_BALBcJ_P0030814 Git1 protein_coding protein_coding MGP_BALBcJ_T0030815.1 MGP_BALBcJ_G0018688.1 mouse_genomes_project 11 75823890 75838704 + MGP_BALBcJ_P0030815 Git1 protein_coding protein_coding MGP_BALBcJ_T0030816.1 MGP_BALBcJ_G0018688.1 mouse_genomes_project 11 75830008 75834033 + Git1 protein_coding retained_intron MGP_BALBcJ_T0030817.1 MGP_BALBcJ_G0018688.1 mouse_genomes_project 11 75831905 75836003 + Git1 protein_coding retained_intron MGP_BALBcJ_T0030818.1 MGP_BALBcJ_G0018688.1 mouse_genomes_project 11 75833396 75835750 + Git1 protein_coding retained_intron MGP_BALBcJ_T0030819.1 MGP_BALBcJ_G0018688.1 mouse_genomes_project 11 75836053 75836957 + Git1 protein_coding retained_intron MGP_BALBcJ_T0031549.1 MGP_BALBcJ_G0018872.1 mouse_genomes_project 11 87721881 87741241 + MGP_BALBcJ_P0031549 Gm525 protein_coding protein_coding MGP_BALBcJ_T0031550.1 MGP_BALBcJ_G0018872.1 mouse_genomes_project 11 87723065 87741166 + MGP_BALBcJ_P0031550 Gm525 protein_coding protein_coding MGP_BALBcJ_T0006198.1 MGP_BALBcJ_G0005179.1 mouse_genomes_project 11 41302973 41490554 + Gm12153 lincRNA lincRNA MGP_BALBcJ_T0030369.1 MGP_BALBcJ_G0018565.1 mouse_genomes_project 11 69309186 69353860 - MGP_BALBcJ_P0030369 Nlrp1b protein_coding protein_coding MGP_BALBcJ_T0100489.1 MGP_BALBcJ_G0038525.1 mouse_genomes_project 11 9685928 9686058 + Gm22789 snoRNA snoRNA MGP_BALBcJ_T0032992.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105298372 105302993 - MGP_BALBcJ_P0032992 Smarcd2 protein_coding protein_coding MGP_BALBcJ_T0032993.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105298372 105308569 - MGP_BALBcJ_P0032993 Smarcd2 protein_coding protein_coding MGP_BALBcJ_T0032994.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105298907 105300856 - Smarcd2 protein_coding retained_intron MGP_BALBcJ_T0032995.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105298992 105300130 - Smarcd2 protein_coding retained_intron MGP_BALBcJ_T0032996.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105299212 105300940 - MGP_BALBcJ_P0032996 Smarcd2 protein_coding protein_coding MGP_BALBcJ_T0032997.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105299926 105301265 - Smarcd2 protein_coding retained_intron MGP_BALBcJ_T0032998.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105300505 105308562 - Smarcd2 protein_coding processed_transcript MGP_BALBcJ_T0032999.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105300932 105302677 - Smarcd2 protein_coding processed_transcript MGP_BALBcJ_T0033000.1 MGP_BALBcJ_G0019243.1 mouse_genomes_project 11 105302084 105302722 - Smarcd2 protein_coding retained_intron MGP_BALBcJ_T0029401.1 MGP_BALBcJ_G0018359.1 mouse_genomes_project 11 58403011 58474523 + MGP_BALBcJ_P0029401 Myo15 protein_coding protein_coding MGP_BALBcJ_T0029402.1 MGP_BALBcJ_G0018359.1 mouse_genomes_project 11 58403011 58474523 + MGP_BALBcJ_P0029402 Myo15 protein_coding protein_coding MGP_BALBcJ_T0029403.1 MGP_BALBcJ_G0018359.1 mouse_genomes_project 11 58403011 58474523 + MGP_BALBcJ_P0029403 Myo15 protein_coding protein_coding MGP_BALBcJ_T0029404.1 MGP_BALBcJ_G0018359.1 mouse_genomes_project 11 58413876 58455984 + MGP_BALBcJ_P0029404 Myo15 protein_coding protein_coding MGP_BALBcJ_T0029405.1 MGP_BALBcJ_G0018359.1 mouse_genomes_project 11 58455805 58468140 + Myo15 protein_coding retained_intron MGP_BALBcJ_T0031385.1 MGP_BALBcJ_G0018831.1 mouse_genomes_project 11 85105938 85128751 + MGP_BALBcJ_P0031385 Tubd1 protein_coding protein_coding MGP_BALBcJ_T0031386.1 MGP_BALBcJ_G0018831.1 mouse_genomes_project 11 85105938 85128752 + MGP_BALBcJ_P0031386 Tubd1 protein_coding protein_coding MGP_BALBcJ_T0031387.1 MGP_BALBcJ_G0018831.1 mouse_genomes_project 11 85105938 85128752 + MGP_BALBcJ_P0031387 Tubd1 protein_coding protein_coding MGP_BALBcJ_T0031388.1 MGP_BALBcJ_G0018831.1 mouse_genomes_project 11 85105938 85128752 + MGP_BALBcJ_P0031388 Tubd1 protein_coding protein_coding MGP_BALBcJ_T0031389.1 MGP_BALBcJ_G0018831.1 mouse_genomes_project 11 85116407 85128752 + MGP_BALBcJ_P0031389 Tubd1 protein_coding protein_coding MGP_BALBcJ_T0012744.1 MGP_BALBcJ_G0010841.1 mouse_genomes_project 11 107809761 107810185 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032657.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101309749 101324539 - MGP_BALBcJ_P0032657 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032658.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101309750 101324539 - MGP_BALBcJ_P0032658 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032659.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311091 101322140 - MGP_BALBcJ_P0032659 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032660.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311091 101324539 - MGP_BALBcJ_P0032660 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032661.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311091 101323307 - MGP_BALBcJ_P0032661 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032662.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311091 101322164 - MGP_BALBcJ_P0032662 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032663.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311160 101322754 - MGP_BALBcJ_P0032663 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032664.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311463 101323102 - MGP_BALBcJ_P0032664 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032665.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101311649 101325185 - MGP_BALBcJ_P0032665 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032666.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101313699 101314903 - Ubtf protein_coding retained_intron MGP_BALBcJ_T0032667.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101314502 101315371 - Ubtf protein_coding retained_intron MGP_BALBcJ_T0032668.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101317217 101322135 - MGP_BALBcJ_P0032668 Ubtf protein_coding protein_coding MGP_BALBcJ_T0032669.1 MGP_BALBcJ_G0019173.1 mouse_genomes_project 11 101319071 101322165 - MGP_BALBcJ_P0032669 Ubtf protein_coding protein_coding MGP_BALBcJ_T0012611.1 MGP_BALBcJ_G0010708.1 mouse_genomes_project 11 59125126 59125843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031652.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031652 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031653.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031653 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031654.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031654 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031655.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031655 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031656.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031656 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031657.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031657 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031658.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031658 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031659.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031659 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031660.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089175 93156869 - MGP_BALBcJ_P0031660 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031661.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089190 93157403 - MGP_BALBcJ_P0031661 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031662.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93089419 93156869 - MGP_BALBcJ_P0031662 Cacna1g protein_coding protein_coding MGP_BALBcJ_T0031663.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93090636 93092473 - Cacna1g protein_coding processed_transcript MGP_BALBcJ_T0031664.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93092274 93097983 - Cacna1g protein_coding processed_transcript MGP_BALBcJ_T0031665.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93099607 93105105 - Cacna1g protein_coding processed_transcript MGP_BALBcJ_T0031666.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93106213 93107436 - Cacna1g protein_coding processed_transcript MGP_BALBcJ_T0031667.1 MGP_BALBcJ_G0018897.1 mouse_genomes_project 11 93107925 93156410 - Cacna1g protein_coding processed_transcript MGP_BALBcJ_T0028767.1 MGP_BALBcJ_G0018177.1 mouse_genomes_project 11 47452321 47525000 + MGP_BALBcJ_P0028767 Rasgef1c protein_coding protein_coding MGP_BALBcJ_T0028768.1 MGP_BALBcJ_G0018177.1 mouse_genomes_project 11 47452551 47525774 + MGP_BALBcJ_P0028768 Rasgef1c protein_coding protein_coding MGP_BALBcJ_T0028769.1 MGP_BALBcJ_G0018177.1 mouse_genomes_project 11 47508672 47520530 + Rasgef1c protein_coding processed_transcript MGP_BALBcJ_T0003196.1 MGP_BALBcJ_G0002962.1 mouse_genomes_project 11 66254741 66258702 - C78197 antisense antisense MGP_BALBcJ_T0030614.1 MGP_BALBcJ_G0018644.1 mouse_genomes_project 11 73447817 73452762 - MGP_BALBcJ_P0030614 Hic1 protein_coding protein_coding MGP_BALBcJ_T0030615.1 MGP_BALBcJ_G0018644.1 mouse_genomes_project 11 73450405 73451399 - Hic1 protein_coding processed_transcript MGP_BALBcJ_T0028701.1 MGP_BALBcJ_G0018156.1 mouse_genomes_project 11 46568443 46569424 - MGP_BALBcJ_P0028701 protein_coding protein_coding MGP_BALBcJ_T0031468.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86347936 86373306 + MGP_BALBcJ_P0031468 Bzrap1 protein_coding protein_coding MGP_BALBcJ_T0031469.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86347982 86373306 + MGP_BALBcJ_P0031469 Bzrap1 protein_coding protein_coding MGP_BALBcJ_T0031470.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86352138 86353803 + Bzrap1 protein_coding processed_transcript MGP_BALBcJ_T0031471.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86363487 86366896 + MGP_BALBcJ_P0031471 Bzrap1 protein_coding protein_coding MGP_BALBcJ_T0031472.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86363894 86373306 + MGP_BALBcJ_P0031472 Bzrap1 protein_coding protein_coding MGP_BALBcJ_T0031473.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86364452 86373306 + Bzrap1 protein_coding retained_intron MGP_BALBcJ_T0031474.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86366150 86373306 + Bzrap1 protein_coding retained_intron MGP_BALBcJ_T0031475.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86366309 86367647 + Bzrap1 protein_coding retained_intron MGP_BALBcJ_T0031476.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86367653 86372119 + MGP_BALBcJ_P0031476 Bzrap1 protein_coding protein_coding MGP_BALBcJ_T0031477.1 MGP_BALBcJ_G0018851.1 mouse_genomes_project 11 86368934 86370572 + Bzrap1 protein_coding retained_intron MGP_BALBcJ_T0012468.1 MGP_BALBcJ_G0010565.1 mouse_genomes_project 11 13517973 13520919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009632.1 MGP_BALBcJ_G0007757.1 mouse_genomes_project 11 20567025 20567116 - miRNA miRNA MGP_BALBcJ_T0034018.1 MGP_BALBcJ_G0019449.1 mouse_genomes_project 11 119755798 119763149 + MGP_BALBcJ_P0034018 Slc25a10 protein_coding protein_coding MGP_BALBcJ_T0034019.1 MGP_BALBcJ_G0019449.1 mouse_genomes_project 11 119755846 119762555 + Slc25a10 protein_coding processed_transcript MGP_BALBcJ_T0034020.1 MGP_BALBcJ_G0019449.1 mouse_genomes_project 11 119755867 119759873 + Slc25a10 protein_coding processed_transcript MGP_BALBcJ_T0034021.1 MGP_BALBcJ_G0019449.1 mouse_genomes_project 11 119755873 119760878 + Slc25a10 protein_coding processed_transcript MGP_BALBcJ_T0034022.1 MGP_BALBcJ_G0019449.1 mouse_genomes_project 11 119760058 119761925 + Slc25a10 protein_coding processed_transcript MGP_BALBcJ_T0034023.1 MGP_BALBcJ_G0019449.1 mouse_genomes_project 11 119761686 119762239 + Slc25a10 protein_coding processed_transcript MGP_BALBcJ_T0003220.1 MGP_BALBcJ_G0002983.1 mouse_genomes_project 11 79283796 79291672 - 4930507D10Rik antisense antisense MGP_BALBcJ_T0017162.1 MGP_BALBcJ_G0015113.1 mouse_genomes_project 11 60618297 60620228 + 2410006H16Rik processed_transcript processed_transcript MGP_BALBcJ_T0030949.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76672364 76694406 + MGP_BALBcJ_P0030949 Spag5 protein_coding protein_coding MGP_BALBcJ_T0030950.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76672459 76686864 + Spag5 protein_coding retained_intron MGP_BALBcJ_T0030951.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76672490 76686537 + Spag5 protein_coding retained_intron MGP_BALBcJ_T0030952.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76684788 76685758 + Spag5 protein_coding retained_intron MGP_BALBcJ_T0030953.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76687030 76687990 + Spag5 protein_coding retained_intron MGP_BALBcJ_T0030954.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76687848 76691847 + Spag5 protein_coding retained_intron MGP_BALBcJ_T0030955.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76689910 76692324 + Spag5 protein_coding processed_transcript MGP_BALBcJ_T0030956.1 MGP_BALBcJ_G0018714.1 mouse_genomes_project 11 76691874 76692689 + Spag5 protein_coding retained_intron MGP_BALBcJ_T0009672.1 MGP_BALBcJ_G0007797.1 mouse_genomes_project 11 67761109 67761229 - Mir467f miRNA miRNA MGP_BALBcJ_T0032208.1 MGP_BALBcJ_G0019048.1 mouse_genomes_project 11 98508421 98509436 - MGP_BALBcJ_P0032208 Krtap4-1 protein_coding protein_coding MGP_BALBcJ_T0009683.1 MGP_BALBcJ_G0007808.1 mouse_genomes_project 11 70574119 70574228 + Mir6338 miRNA miRNA MGP_BALBcJ_T0033986.1 MGP_BALBcJ_G0019443.1 mouse_genomes_project 11 119709990 119716291 - Pde6g protein_coding processed_transcript MGP_BALBcJ_T0033987.1 MGP_BALBcJ_G0019443.1 mouse_genomes_project 11 119710009 119716309 - Pde6g protein_coding processed_transcript MGP_BALBcJ_T0033988.1 MGP_BALBcJ_G0019443.1 mouse_genomes_project 11 119710011 119716357 - MGP_BALBcJ_P0033988 Pde6g protein_coding protein_coding MGP_BALBcJ_T0009676.1 MGP_BALBcJ_G0007801.1 mouse_genomes_project 11 68165733 68165822 + Mir324 miRNA miRNA MGP_BALBcJ_T0028262.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23531048 23646507 - MGP_BALBcJ_P0028262 Vrk2 protein_coding protein_coding MGP_BALBcJ_T0028263.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23531130 23649071 - MGP_BALBcJ_P0028263 Vrk2 protein_coding protein_coding MGP_BALBcJ_T0028264.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23593260 23648790 - Vrk2 protein_coding retained_intron MGP_BALBcJ_T0028265.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23593676 23608751 - Vrk2 protein_coding processed_transcript MGP_BALBcJ_T0028266.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23604794 23649074 - Vrk2 protein_coding retained_intron MGP_BALBcJ_T0028267.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23607247 23649150 - MGP_BALBcJ_P0028267 Vrk2 protein_coding protein_coding MGP_BALBcJ_T0028268.1 MGP_BALBcJ_G0018039.1 mouse_genomes_project 11 23638094 23648771 - Vrk2 protein_coding processed_transcript MGP_BALBcJ_T0029736.1 MGP_BALBcJ_G0018432.1 mouse_genomes_project 11 65709142 65810472 - MGP_BALBcJ_P0029736 Glp2r protein_coding protein_coding MGP_BALBcJ_T0029739.1 MGP_BALBcJ_G0018432.1 mouse_genomes_project 11 65757725 65823243 - MGP_BALBcJ_P0029739 Glp2r protein_coding protein_coding MGP_BALBcJ_T0031451.1 MGP_BALBcJ_G0018847.1 mouse_genomes_project 11 86173209 86197163 + MGP_BALBcJ_P0031451 Mtmr4 protein_coding protein_coding MGP_BALBcJ_T0031452.1 MGP_BALBcJ_G0018847.1 mouse_genomes_project 11 86173266 86197163 + MGP_BALBcJ_P0031452 Mtmr4 protein_coding protein_coding MGP_BALBcJ_T0031453.1 MGP_BALBcJ_G0018847.1 mouse_genomes_project 11 86173273 86179975 + MGP_BALBcJ_P0031453 Mtmr4 protein_coding protein_coding MGP_BALBcJ_T0031454.1 MGP_BALBcJ_G0018847.1 mouse_genomes_project 11 86173511 86178761 + MGP_BALBcJ_P0031454 Mtmr4 protein_coding protein_coding MGP_BALBcJ_T0031455.1 MGP_BALBcJ_G0018847.1 mouse_genomes_project 11 86173944 86196033 + MGP_BALBcJ_P0031455 Mtmr4 protein_coding protein_coding MGP_BALBcJ_T0031456.1 MGP_BALBcJ_G0018847.1 mouse_genomes_project 11 86176691 86182107 + MGP_BALBcJ_P0031456 Mtmr4 protein_coding protein_coding MGP_BALBcJ_T0012640.1 MGP_BALBcJ_G0010737.1 mouse_genomes_project 11 71036249 71038039 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032793.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115499 102125964 + MGP_BALBcJ_P0032793 Acbd4 protein_coding protein_coding MGP_BALBcJ_T0032794.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115499 102125967 + MGP_BALBcJ_P0032794 Acbd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032795.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115503 102117839 + Acbd4 protein_coding processed_transcript MGP_BALBcJ_T0032796.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115503 102119215 + MGP_BALBcJ_P0032796 Acbd4 protein_coding protein_coding MGP_BALBcJ_T0032797.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115505 102125966 + MGP_BALBcJ_P0032797 Acbd4 protein_coding protein_coding MGP_BALBcJ_T0032798.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115526 102117203 + Acbd4 protein_coding retained_intron MGP_BALBcJ_T0032799.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115529 102117997 + MGP_BALBcJ_P0032799 Acbd4 protein_coding protein_coding MGP_BALBcJ_T0032800.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102115543 102117041 + Acbd4 protein_coding retained_intron MGP_BALBcJ_T0032801.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102116838 102119289 + MGP_BALBcJ_P0032801 Acbd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032802.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102116891 102119274 + Acbd4 protein_coding processed_transcript MGP_BALBcJ_T0032803.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102116893 102118669 + MGP_BALBcJ_P0032803 Acbd4 protein_coding protein_coding MGP_BALBcJ_T0032804.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102116925 102117916 + Acbd4 protein_coding retained_intron MGP_BALBcJ_T0032805.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102117069 102118305 + Acbd4 protein_coding retained_intron MGP_BALBcJ_T0032806.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102118527 102125720 + Acbd4 protein_coding retained_intron MGP_BALBcJ_T0032807.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102120005 102125506 + Acbd4 protein_coding processed_transcript MGP_BALBcJ_T0032808.1 MGP_BALBcJ_G0019197.1 mouse_genomes_project 11 102120026 102125964 + Acbd4 protein_coding processed_transcript MGP_BALBcJ_T0027851.1 MGP_BALBcJ_G0017941.1 mouse_genomes_project 11 2220404 2390546 - MGP_BALBcJ_P0027851 Znrf3 protein_coding protein_coding MGP_BALBcJ_T0027852.1 MGP_BALBcJ_G0017941.1 mouse_genomes_project 11 2222684 2325215 - MGP_BALBcJ_P0027852 Znrf3 protein_coding protein_coding MGP_BALBcJ_T0027853.1 MGP_BALBcJ_G0017941.1 mouse_genomes_project 11 2232876 2390546 - MGP_BALBcJ_P0027853 Znrf3 protein_coding protein_coding MGP_BALBcJ_T0017105.1 MGP_BALBcJ_G0015085.1 mouse_genomes_project 11 420701 426979 + Gm11946 processed_transcript processed_transcript MGP_BALBcJ_T0017106.1 MGP_BALBcJ_G0015085.1 mouse_genomes_project 11 421492 427401 + Gm11946 processed_transcript processed_transcript MGP_BALBcJ_T0032445.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207214 100213014 + MGP_BALBcJ_P0032445 Vps25 protein_coding protein_coding MGP_BALBcJ_T0032446.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207214 100211514 + MGP_BALBcJ_P0032446 Vps25 protein_coding protein_coding MGP_BALBcJ_T0032447.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207236 100213010 + MGP_BALBcJ_P0032447 Vps25 protein_coding protein_coding MGP_BALBcJ_T0032448.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207237 100212381 + MGP_BALBcJ_P0032448 Vps25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032449.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207242 100212788 + MGP_BALBcJ_P0032449 Vps25 protein_coding protein_coding MGP_BALBcJ_T0032450.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207260 100212521 + MGP_BALBcJ_P0032450 Vps25 protein_coding protein_coding MGP_BALBcJ_T0032451.1 MGP_BALBcJ_G0019131.1 mouse_genomes_project 11 100207271 100212675 + Vps25 protein_coding retained_intron MGP_BALBcJ_T0003306.1 MGP_BALBcJ_G0003051.1 mouse_genomes_project 11 106450795 106452784 + Gm11712 antisense antisense MGP_BALBcJ_T0017207.1 MGP_BALBcJ_G0015137.1 mouse_genomes_project 11 95846922 95849666 - Gm11574 processed_transcript processed_transcript MGP_BALBcJ_T0017144.1 MGP_BALBcJ_G0015104.1 mouse_genomes_project 11 46181809 46192407 - Gm16170 processed_transcript processed_transcript MGP_BALBcJ_T0012764.1 MGP_BALBcJ_G0010861.1 mouse_genomes_project 11 117450844 117451312 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006179.1 MGP_BALBcJ_G0005162.1 mouse_genomes_project 11 26786221 26788078 + Gm12088 lincRNA lincRNA MGP_BALBcJ_T0030652.1 MGP_BALBcJ_G0018654.1 mouse_genomes_project 11 73775532 73798778 + MGP_BALBcJ_P0030652 Prpf8 protein_coding protein_coding MGP_BALBcJ_T0030653.1 MGP_BALBcJ_G0018654.1 mouse_genomes_project 11 73775536 73798780 + MGP_BALBcJ_P0030653 Prpf8 protein_coding protein_coding MGP_BALBcJ_T0030654.1 MGP_BALBcJ_G0018654.1 mouse_genomes_project 11 73775571 73784524 + MGP_BALBcJ_P0030654 Prpf8 protein_coding protein_coding MGP_BALBcJ_T0030655.1 MGP_BALBcJ_G0018654.1 mouse_genomes_project 11 73780949 73782639 + Prpf8 protein_coding retained_intron MGP_BALBcJ_T0031523.1 MGP_BALBcJ_G0018864.1 mouse_genomes_project 11 86919327 86920529 + MGP_BALBcJ_P0031523 Ccdc182 protein_coding protein_coding MGP_BALBcJ_T0012680.1 MGP_BALBcJ_G0010777.1 mouse_genomes_project 11 83773440 83773898 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033159.1 MGP_BALBcJ_G0019276.1 mouse_genomes_project 11 108552769 108576239 - MGP_BALBcJ_P0033159 Slc16a6 protein_coding protein_coding MGP_BALBcJ_T0033160.1 MGP_BALBcJ_G0019276.1 mouse_genomes_project 11 108554632 108575935 - MGP_BALBcJ_P0033160 Slc16a6 protein_coding protein_coding MGP_BALBcJ_T0033161.1 MGP_BALBcJ_G0019276.1 mouse_genomes_project 11 108562120 108575329 - MGP_BALBcJ_P0033161 Slc16a6 protein_coding protein_coding MGP_BALBcJ_T0033162.1 MGP_BALBcJ_G0019276.1 mouse_genomes_project 11 108569090 108575840 - Slc16a6 protein_coding processed_transcript MGP_BALBcJ_T0031484.1 MGP_BALBcJ_G0018853.1 mouse_genomes_project 11 86394044 86414319 - MGP_BALBcJ_P0031484 Lpo protein_coding protein_coding MGP_BALBcJ_T0031485.1 MGP_BALBcJ_G0018853.1 mouse_genomes_project 11 86404037 86404976 - Lpo protein_coding retained_intron MGP_BALBcJ_T0031486.1 MGP_BALBcJ_G0018853.1 mouse_genomes_project 11 86405204 86416359 - MGP_BALBcJ_P0031486 Lpo protein_coding protein_coding MGP_BALBcJ_T0009707.1 MGP_BALBcJ_G0007832.1 mouse_genomes_project 11 86987144 86987236 + Mir378b miRNA miRNA MGP_BALBcJ_T0098740.1 MGP_BALBcJ_G0036794.1 mouse_genomes_project 11 85550290 85550421 - Gm22387 scaRNA scaRNA MGP_BALBcJ_T0033768.1 MGP_BALBcJ_G0019399.1 mouse_genomes_project 11 117092388 117098861 + MGP_BALBcJ_P0033768 Birc5 protein_coding protein_coding MGP_BALBcJ_T0033769.1 MGP_BALBcJ_G0019399.1 mouse_genomes_project 11 117092456 117098872 + MGP_BALBcJ_P0033769 Birc5 protein_coding protein_coding MGP_BALBcJ_T0032189.1 MGP_BALBcJ_G0019031.1 mouse_genomes_project 11 98215640 98221189 - MGP_BALBcJ_P0032189 Krt27 protein_coding protein_coding MGP_BALBcJ_T0027924.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3263565 3329900 + MGP_BALBcJ_P0027924 Ogdh protein_coding unknown_likely_coding MGP_BALBcJ_T0027925.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3263575 3330867 + MGP_BALBcJ_P0027925 Ogdh protein_coding protein_coding MGP_BALBcJ_T0027926.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3263583 3269767 + Ogdh protein_coding retained_intron MGP_BALBcJ_T0027927.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3263608 3330803 + MGP_BALBcJ_P0027927 Ogdh protein_coding protein_coding MGP_BALBcJ_T0027928.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3263610 3330817 + MGP_BALBcJ_P0027928 Ogdh protein_coding protein_coding MGP_BALBcJ_T0027929.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3263927 3286275 + MGP_BALBcJ_P0027929 Ogdh protein_coding protein_coding MGP_BALBcJ_T0027930.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3264114 3286159 + MGP_BALBcJ_P0027930 Ogdh protein_coding protein_coding MGP_BALBcJ_T0027931.1 MGP_BALBcJ_G0017961.1 mouse_genomes_project 11 3264547 3330817 + MGP_BALBcJ_P0027931 Ogdh protein_coding protein_coding MGP_BALBcJ_T0031543.1 MGP_BALBcJ_G0018870.1 mouse_genomes_project 11 87643794 87664908 + MGP_BALBcJ_P0031543 Trim25 protein_coding protein_coding MGP_BALBcJ_T0031544.1 MGP_BALBcJ_G0018870.1 mouse_genomes_project 11 87643794 87664908 + MGP_BALBcJ_P0031544 Trim25 protein_coding protein_coding MGP_BALBcJ_T0031545.1 MGP_BALBcJ_G0018870.1 mouse_genomes_project 11 87643794 87658368 + MGP_BALBcJ_P0031545 Trim25 protein_coding protein_coding MGP_BALBcJ_T0029535.1 MGP_BALBcJ_G0018386.1 mouse_genomes_project 11 59732123 59765805 - MGP_BALBcJ_P0029535 Prpsap2 protein_coding protein_coding MGP_BALBcJ_T0029536.1 MGP_BALBcJ_G0018386.1 mouse_genomes_project 11 59732127 59765729 - Prpsap2 protein_coding processed_transcript MGP_BALBcJ_T0029537.1 MGP_BALBcJ_G0018386.1 mouse_genomes_project 11 59732127 59765779 - MGP_BALBcJ_P0029537 Prpsap2 protein_coding protein_coding MGP_BALBcJ_T0029538.1 MGP_BALBcJ_G0018386.1 mouse_genomes_project 11 59758955 59765757 - Prpsap2 protein_coding processed_transcript MGP_BALBcJ_T0012748.1 MGP_BALBcJ_G0010845.1 mouse_genomes_project 11 110735937 110736427 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017164.1 MGP_BALBcJ_G0015115.1 mouse_genomes_project 11 65041589 65051498 + Gm12299 processed_transcript processed_transcript MGP_BALBcJ_T0012598.1 MGP_BALBcJ_G0010695.1 mouse_genomes_project 11 56229352 56229571 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028181.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20051021 20064290 + MGP_BALBcJ_P0028181 Cct4 protein_coding protein_coding MGP_BALBcJ_T0028182.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20051128 20054893 + MGP_BALBcJ_P0028182 Cct4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028183.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20051141 20060386 + Cct4 protein_coding retained_intron MGP_BALBcJ_T0028184.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20051152 20057600 + MGP_BALBcJ_P0028184 Cct4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028185.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20051152 20063661 + MGP_BALBcJ_P0028185 Cct4 protein_coding protein_coding MGP_BALBcJ_T0028186.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20051154 20057653 + MGP_BALBcJ_P0028186 Cct4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028187.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20056127 20057605 + Cct4 protein_coding retained_intron MGP_BALBcJ_T0028188.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20061446 20062129 + Cct4 protein_coding processed_transcript MGP_BALBcJ_T0028189.1 MGP_BALBcJ_G0018024.1 mouse_genomes_project 11 20062443 20063365 + Cct4 protein_coding retained_intron MGP_BALBcJ_T0028427.1 MGP_BALBcJ_G0018073.1 mouse_genomes_project 11 29521009 29523842 + MGP_BALBcJ_P0028427 Hba-x protein_coding protein_coding MGP_BALBcJ_T0028428.1 MGP_BALBcJ_G0018073.1 mouse_genomes_project 11 29521502 29523842 + MGP_BALBcJ_P0028428 Hba-x protein_coding protein_coding MGP_BALBcJ_T0031016.1 MGP_BALBcJ_G0018733.1 mouse_genomes_project 11 77415129 77554897 - MGP_BALBcJ_P0031016 Ksr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0031017.1 MGP_BALBcJ_G0018733.1 mouse_genomes_project 11 77415138 77555055 - MGP_BALBcJ_P0031017 Ksr1 protein_coding protein_coding MGP_BALBcJ_T0031018.1 MGP_BALBcJ_G0018733.1 mouse_genomes_project 11 77429307 77555055 - MGP_BALBcJ_P0031018 Ksr1 protein_coding protein_coding MGP_BALBcJ_T0031019.1 MGP_BALBcJ_G0018733.1 mouse_genomes_project 11 77448150 77463104 - MGP_BALBcJ_P0031019 Ksr1 protein_coding protein_coding MGP_BALBcJ_T0031020.1 MGP_BALBcJ_G0018733.1 mouse_genomes_project 11 77448413 77460856 - MGP_BALBcJ_P0031020 Ksr1 protein_coding protein_coding MGP_BALBcJ_T0099301.1 MGP_BALBcJ_G0037337.1 mouse_genomes_project 11 108161015 108161122 - Gm24149 snRNA snRNA MGP_BALBcJ_T0031831.1 MGP_BALBcJ_G0018946.1 mouse_genomes_project 11 95087619 95090405 + Hoxb5 protein_coding retained_intron MGP_BALBcJ_T0031832.1 MGP_BALBcJ_G0018946.1 mouse_genomes_project 11 95087795 95090404 + MGP_BALBcJ_P0031832 Hoxb5 protein_coding protein_coding MGP_BALBcJ_T0012638.1 MGP_BALBcJ_G0010735.1 mouse_genomes_project 11 69221200 69221950 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006220.1 MGP_BALBcJ_G0005199.1 mouse_genomes_project 11 58042351 58045363 - 4930412M03Rik lincRNA lincRNA MGP_BALBcJ_T0029159.1 MGP_BALBcJ_G0018278.1 mouse_genomes_project 11 55450633 55594750 + MGP_BALBcJ_P0029159 Galnt10 protein_coding protein_coding MGP_BALBcJ_T0029160.1 MGP_BALBcJ_G0018278.1 mouse_genomes_project 11 55450656 55536464 + MGP_BALBcJ_P0029160 Galnt10 protein_coding protein_coding MGP_BALBcJ_T0017117.1 MGP_BALBcJ_G0015089.1 mouse_genomes_project 11 3705190 3709221 - Gm11981 processed_transcript processed_transcript MGP_BALBcJ_T0032758.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101859216 101901234 - MGP_BALBcJ_P0032758 Eftud2 protein_coding protein_coding MGP_BALBcJ_T0032759.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101859216 101901252 - MGP_BALBcJ_P0032759 Eftud2 protein_coding protein_coding MGP_BALBcJ_T0032760.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101859220 101864976 - MGP_BALBcJ_P0032760 Eftud2 protein_coding protein_coding MGP_BALBcJ_T0032761.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101859544 101897978 - MGP_BALBcJ_P0032761 Eftud2 protein_coding protein_coding MGP_BALBcJ_T0032762.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101859581 101861978 - MGP_BALBcJ_P0032762 Eftud2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032763.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101860193 101861419 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0032764.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101860954 101868790 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0032765.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101869999 101881056 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0032766.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101883442 101897954 - MGP_BALBcJ_P0032766 Eftud2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032767.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101884690 101886789 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0032768.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101886681 101901231 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0032769.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101890874 101897979 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0032770.1 MGP_BALBcJ_G0019188.1 mouse_genomes_project 11 101897227 101901202 - Eftud2 protein_coding retained_intron MGP_BALBcJ_T0006160.1 MGP_BALBcJ_G0005147.1 mouse_genomes_project 11 19668659 19669740 + Gm12052 lincRNA lincRNA MGP_BALBcJ_T0033521.1 MGP_BALBcJ_G0019353.1 mouse_genomes_project 11 115266896 115275497 - MGP_BALBcJ_P0033521 H3f3b protein_coding protein_coding MGP_BALBcJ_T0033522.1 MGP_BALBcJ_G0019353.1 mouse_genomes_project 11 115266945 115270715 - MGP_BALBcJ_P0033522 H3f3b protein_coding protein_coding MGP_BALBcJ_T0033523.1 MGP_BALBcJ_G0019353.1 mouse_genomes_project 11 115269065 115270725 - H3f3b protein_coding processed_transcript MGP_BALBcJ_T0033524.1 MGP_BALBcJ_G0019353.1 mouse_genomes_project 11 115269719 115270684 - H3f3b protein_coding processed_transcript MGP_BALBcJ_T0003112.1 MGP_BALBcJ_G0002890.1 mouse_genomes_project 11 16005832 16007881 + Gm16140 antisense antisense MGP_BALBcJ_T0003113.1 MGP_BALBcJ_G0002890.1 mouse_genomes_project 11 16005834 16007491 + Gm16140 antisense antisense MGP_BALBcJ_T0032206.1 MGP_BALBcJ_G0019046.1 mouse_genomes_project 11 98478145 98478904 - MGP_BALBcJ_P0032206 Krtap9-3 protein_coding protein_coding MGP_BALBcJ_T0031371.1 MGP_BALBcJ_G0018828.1 mouse_genomes_project 11 84824525 84915127 - MGP_BALBcJ_P0031371 Med13 protein_coding protein_coding MGP_BALBcJ_T0031372.1 MGP_BALBcJ_G0018828.1 mouse_genomes_project 11 84830039 84836093 - Med13 protein_coding processed_transcript MGP_BALBcJ_T0031373.1 MGP_BALBcJ_G0018828.1 mouse_genomes_project 11 84832866 84836485 - Med13 protein_coding retained_intron MGP_BALBcJ_T0031374.1 MGP_BALBcJ_G0018828.1 mouse_genomes_project 11 84888577 84889755 - Med13 protein_coding retained_intron MGP_BALBcJ_T0012543.1 MGP_BALBcJ_G0010640.1 mouse_genomes_project 11 37787557 37788219 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028595.1 MGP_BALBcJ_G0018123.1 mouse_genomes_project 11 41885490 41932400 + MGP_BALBcJ_P0028595 Rnf145 protein_coding protein_coding MGP_BALBcJ_T0028596.1 MGP_BALBcJ_G0018123.1 mouse_genomes_project 11 41885509 41891113 + Rnf145 protein_coding processed_transcript MGP_BALBcJ_T0028597.1 MGP_BALBcJ_G0018123.1 mouse_genomes_project 11 41886203 41921745 + MGP_BALBcJ_P0028597 Rnf145 protein_coding protein_coding MGP_BALBcJ_T0028598.1 MGP_BALBcJ_G0018123.1 mouse_genomes_project 11 41887066 41915696 + Rnf145 protein_coding processed_transcript MGP_BALBcJ_T0028599.1 MGP_BALBcJ_G0018123.1 mouse_genomes_project 11 41923372 41926583 + Rnf145 protein_coding processed_transcript MGP_BALBcJ_T0028600.1 MGP_BALBcJ_G0018123.1 mouse_genomes_project 11 41926564 41928527 + Rnf145 protein_coding processed_transcript MGP_BALBcJ_T0028269.1 MGP_BALBcJ_G0018040.1 mouse_genomes_project 11 23648409 23649013 + MGP_BALBcJ_P0028269 Gm6899 protein_coding protein_coding MGP_BALBcJ_T0030703.1 MGP_BALBcJ_G0018664.1 mouse_genomes_project 11 74133079 74239848 - MGP_BALBcJ_P0030703 Rph3al protein_coding protein_coding MGP_BALBcJ_T0030704.1 MGP_BALBcJ_G0018664.1 mouse_genomes_project 11 74134217 74212863 - MGP_BALBcJ_P0030704 Rph3al protein_coding protein_coding MGP_BALBcJ_T0030705.1 MGP_BALBcJ_G0018664.1 mouse_genomes_project 11 74201522 74228003 - MGP_BALBcJ_P0030705 Rph3al protein_coding protein_coding MGP_BALBcJ_T0030706.1 MGP_BALBcJ_G0018664.1 mouse_genomes_project 11 74202538 74239807 - MGP_BALBcJ_P0030706 Rph3al protein_coding protein_coding MGP_BALBcJ_T0030707.1 MGP_BALBcJ_G0018664.1 mouse_genomes_project 11 74208371 74240539 - MGP_BALBcJ_P0030707 Rph3al protein_coding protein_coding MGP_BALBcJ_T0003186.1 MGP_BALBcJ_G0002955.1 mouse_genomes_project 11 61986766 61990576 + 9630013K17Rik antisense antisense MGP_BALBcJ_T0028161.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19056316 19345819 - MGP_BALBcJ_P0028161 Ehbp1 protein_coding protein_coding MGP_BALBcJ_T0028162.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19056316 19344862 - MGP_BALBcJ_P0028162 Ehbp1 protein_coding protein_coding MGP_BALBcJ_T0028163.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19056318 19345819 - MGP_BALBcJ_P0028163 Ehbp1 protein_coding protein_coding MGP_BALBcJ_T0028164.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19165489 19228516 - Ehbp1 protein_coding processed_transcript MGP_BALBcJ_T0028165.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19202028 19344896 - MGP_BALBcJ_P0028165 Ehbp1 protein_coding protein_coding MGP_BALBcJ_T0028166.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19224546 19226920 - Ehbp1 protein_coding processed_transcript MGP_BALBcJ_T0028167.1 MGP_BALBcJ_G0018017.1 mouse_genomes_project 11 19290557 19396867 - Ehbp1 protein_coding processed_transcript MGP_BALBcJ_T0012626.1 MGP_BALBcJ_G0010723.1 mouse_genomes_project 11 67187457 67187628 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034217.1 MGP_BALBcJ_G0019490.1 mouse_genomes_project 11 120707645 120717532 + MGP_BALBcJ_P0034217 Fn3krp protein_coding protein_coding MGP_BALBcJ_T0032298.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99405609 99457341 - MGP_BALBcJ_P0032298 Acly protein_coding protein_coding MGP_BALBcJ_T0032299.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99405612 99457341 - MGP_BALBcJ_P0032299 Acly protein_coding protein_coding MGP_BALBcJ_T0032300.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99405614 99452940 - MGP_BALBcJ_P0032300 Acly protein_coding protein_coding MGP_BALBcJ_T0032301.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99406482 99408758 - Acly protein_coding processed_transcript MGP_BALBcJ_T0032302.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99411516 99423460 - Acly protein_coding processed_transcript MGP_BALBcJ_T0032303.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99427599 99428450 - Acly protein_coding processed_transcript MGP_BALBcJ_T0032304.1 MGP_BALBcJ_G0019100.1 mouse_genomes_project 11 99429930 99457210 - MGP_BALBcJ_P0032304 Acly protein_coding protein_coding MGP_BALBcJ_T0012579.1 MGP_BALBcJ_G0010676.1 mouse_genomes_project 11 51676978 51678150 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029917.1 MGP_BALBcJ_G0018471.1 mouse_genomes_project 11 67514357 67516006 - MGP_BALBcJ_P0029917 protein_coding protein_coding MGP_BALBcJ_T0028444.1 MGP_BALBcJ_G0018081.1 mouse_genomes_project 11 30074111 30080120 - MGP_BALBcJ_P0028444 Smim23 protein_coding protein_coding MGP_BALBcJ_T0028445.1 MGP_BALBcJ_G0018081.1 mouse_genomes_project 11 30075954 30080163 - MGP_BALBcJ_P0028445 Smim23 protein_coding protein_coding MGP_BALBcJ_T0012759.1 MGP_BALBcJ_G0010856.1 mouse_genomes_project 11 115636906 115637362 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098467.1 MGP_BALBcJ_G0036521.1 mouse_genomes_project 11 97110765 97110872 - n-R5s73 rRNA rRNA MGP_BALBcJ_T0003263.1 MGP_BALBcJ_G0003015.1 mouse_genomes_project 11 96373841 96383335 + antisense antisense MGP_BALBcJ_T0032137.1 MGP_BALBcJ_G0019017.1 mouse_genomes_project 11 97690462 97707785 + MGP_BALBcJ_P0032137 Rapgefl1 protein_coding protein_coding MGP_BALBcJ_T0032138.1 MGP_BALBcJ_G0019017.1 mouse_genomes_project 11 97698895 97701165 + Rapgefl1 protein_coding retained_intron MGP_BALBcJ_T0032139.1 MGP_BALBcJ_G0019017.1 mouse_genomes_project 11 97704431 97707087 + Rapgefl1 protein_coding retained_intron MGP_BALBcJ_T0027727.1 MGP_BALBcJ_G0017916.1 mouse_genomes_project 11 1046944 1052914 + MGP_BALBcJ_P0027727 Rnf215 protein_coding protein_coding MGP_BALBcJ_T0027728.1 MGP_BALBcJ_G0017916.1 mouse_genomes_project 11 1046956 1049111 + MGP_BALBcJ_P0027728 Rnf215 protein_coding protein_coding MGP_BALBcJ_T0027729.1 MGP_BALBcJ_G0017916.1 mouse_genomes_project 11 1047024 1048960 + MGP_BALBcJ_P0027729 Rnf215 protein_coding protein_coding MGP_BALBcJ_T0027730.1 MGP_BALBcJ_G0017916.1 mouse_genomes_project 11 1047244 1048898 + Rnf215 protein_coding processed_transcript MGP_BALBcJ_T0028283.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26365324 26417341 + MGP_BALBcJ_P0028283 Smek2 protein_coding protein_coding MGP_BALBcJ_T0028284.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26365324 26406194 + MGP_BALBcJ_P0028284 Smek2 protein_coding protein_coding MGP_BALBcJ_T0028285.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26370140 26384904 + MGP_BALBcJ_P0028285 Smek2 protein_coding protein_coding MGP_BALBcJ_T0028286.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26393773 26397756 + Smek2 protein_coding processed_transcript MGP_BALBcJ_T0028287.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26393784 26406015 + MGP_BALBcJ_P0028287 Smek2 protein_coding protein_coding MGP_BALBcJ_T0028288.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26402167 26415095 + Smek2 protein_coding processed_transcript MGP_BALBcJ_T0028289.1 MGP_BALBcJ_G0018044.1 mouse_genomes_project 11 26410166 26417341 + MGP_BALBcJ_P0028289 Smek2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028835.1 MGP_BALBcJ_G0018191.1 mouse_genomes_project 11 48403035 48411248 - MGP_BALBcJ_P0028835 Zfp879 protein_coding protein_coding MGP_BALBcJ_T0006294.1 MGP_BALBcJ_G0005252.1 mouse_genomes_project 11 94367353 94374527 + Gm11528 lincRNA lincRNA MGP_BALBcJ_T0017202.1 MGP_BALBcJ_G0015135.1 mouse_genomes_project 11 95710186 95747599 + D030028A08Rik processed_transcript processed_transcript MGP_BALBcJ_T0017203.1 MGP_BALBcJ_G0015135.1 mouse_genomes_project 11 95738309 95759561 + D030028A08Rik processed_transcript processed_transcript MGP_BALBcJ_T0017204.1 MGP_BALBcJ_G0015135.1 mouse_genomes_project 11 95738333 95754560 + D030028A08Rik processed_transcript processed_transcript MGP_BALBcJ_T0017205.1 MGP_BALBcJ_G0015135.1 mouse_genomes_project 11 95738456 95758396 + D030028A08Rik processed_transcript processed_transcript MGP_BALBcJ_T0033863.1 MGP_BALBcJ_G0019421.1 mouse_genomes_project 11 118548412 118560324 - MGP_BALBcJ_P0033863 Eif4a3 protein_coding protein_coding MGP_BALBcJ_T0033864.1 MGP_BALBcJ_G0019421.1 mouse_genomes_project 11 118548413 118549127 - Eif4a3 protein_coding processed_transcript MGP_BALBcJ_T0033865.1 MGP_BALBcJ_G0019421.1 mouse_genomes_project 11 118548413 118549061 - Eif4a3 protein_coding processed_transcript MGP_BALBcJ_T0033866.1 MGP_BALBcJ_G0019421.1 mouse_genomes_project 11 118552475 118553974 - Eif4a3 protein_coding processed_transcript MGP_BALBcJ_T0033867.1 MGP_BALBcJ_G0019421.1 mouse_genomes_project 11 118552818 118560249 - MGP_BALBcJ_P0033867 Eif4a3 protein_coding protein_coding MGP_BALBcJ_T0033868.1 MGP_BALBcJ_G0019421.1 mouse_genomes_project 11 118558040 118560253 - Eif4a3 protein_coding processed_transcript MGP_BALBcJ_T0003158.1 MGP_BALBcJ_G0002931.1 mouse_genomes_project 11 55434678 55454620 - 4933424L21Rik antisense antisense MGP_BALBcJ_T0012544.1 MGP_BALBcJ_G0010641.1 mouse_genomes_project 11 37794490 37795065 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030388.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70338837 70340212 - 4933427D14Rik protein_coding processed_transcript MGP_BALBcJ_T0030389.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70338837 70394685 - MGP_BALBcJ_P0030389 4933427D14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030390.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70338838 70394493 - MGP_BALBcJ_P0030390 4933427D14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030391.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70339005 70390997 - MGP_BALBcJ_P0030391 4933427D14Rik protein_coding protein_coding MGP_BALBcJ_T0030392.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70340301 70359976 - 4933427D14Rik protein_coding processed_transcript MGP_BALBcJ_T0030393.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70382630 70394657 - MGP_BALBcJ_P0030393 4933427D14Rik protein_coding protein_coding MGP_BALBcJ_T0030394.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70385618 70394446 - 4933427D14Rik protein_coding processed_transcript MGP_BALBcJ_T0030395.1 MGP_BALBcJ_G0018570.1 mouse_genomes_project 11 70385865 70389838 - 4933427D14Rik protein_coding processed_transcript MGP_BALBcJ_T0099254.1 MGP_BALBcJ_G0037290.1 mouse_genomes_project 11 59941484 59941591 - Gm23721 snRNA snRNA MGP_BALBcJ_T0030105.1 MGP_BALBcJ_G0018516.1 mouse_genomes_project 11 68149377 68153701 + MGP_BALBcJ_P0030105 Phf23 protein_coding protein_coding MGP_BALBcJ_T0030106.1 MGP_BALBcJ_G0018516.1 mouse_genomes_project 11 68149495 68152068 + Phf23 protein_coding retained_intron MGP_BALBcJ_T0030107.1 MGP_BALBcJ_G0018516.1 mouse_genomes_project 11 68149521 68153698 + MGP_BALBcJ_P0030107 Phf23 protein_coding protein_coding MGP_BALBcJ_T0030108.1 MGP_BALBcJ_G0018516.1 mouse_genomes_project 11 68150232 68152443 + MGP_BALBcJ_P0030108 Phf23 protein_coding protein_coding MGP_BALBcJ_T0030109.1 MGP_BALBcJ_G0018516.1 mouse_genomes_project 11 68150442 68152188 + Phf23 protein_coding processed_transcript MGP_BALBcJ_T0030110.1 MGP_BALBcJ_G0018516.1 mouse_genomes_project 11 68150458 68152089 + Phf23 protein_coding processed_transcript MGP_BALBcJ_T0029625.1 MGP_BALBcJ_G0018401.1 mouse_genomes_project 11 60769766 60770165 + MGP_BALBcJ_P0029625 Gm10428 protein_coding protein_coding MGP_BALBcJ_T0006317.1 MGP_BALBcJ_G0005269.1 mouse_genomes_project 11 108446093 108453596 + 1700096J18Rik lincRNA lincRNA MGP_BALBcJ_T0098461.1 MGP_BALBcJ_G0036515.1 mouse_genomes_project 11 70466962 70467078 + n-R5s70 rRNA rRNA MGP_BALBcJ_T0100545.1 MGP_BALBcJ_G0038581.1 mouse_genomes_project 11 105536777 105536847 + Snord104 snoRNA snoRNA MGP_BALBcJ_T0027721.1 MGP_BALBcJ_G0017915.1 mouse_genomes_project 11 1008055 1030519 - MGP_BALBcJ_P0027721 Sec14l2 protein_coding protein_coding MGP_BALBcJ_T0027722.1 MGP_BALBcJ_G0017915.1 mouse_genomes_project 11 1008791 1030384 - Sec14l2 protein_coding processed_transcript MGP_BALBcJ_T0027723.1 MGP_BALBcJ_G0017915.1 mouse_genomes_project 11 1008791 1019975 - Sec14l2 protein_coding processed_transcript MGP_BALBcJ_T0027724.1 MGP_BALBcJ_G0017915.1 mouse_genomes_project 11 1014193 1019725 - Sec14l2 protein_coding processed_transcript MGP_BALBcJ_T0027725.1 MGP_BALBcJ_G0017915.1 mouse_genomes_project 11 1021788 1035103 - Sec14l2 protein_coding processed_transcript MGP_BALBcJ_T0027726.1 MGP_BALBcJ_G0017915.1 mouse_genomes_project 11 1028144 1030441 - Sec14l2 protein_coding processed_transcript MGP_BALBcJ_T0032394.1 MGP_BALBcJ_G0019119.1 mouse_genomes_project 11 100030171 100032288 + MGP_BALBcJ_P0032394 Hsd17b1 protein_coding protein_coding MGP_BALBcJ_T0028961.1 MGP_BALBcJ_G0018226.1 mouse_genomes_project 11 50506015 50937975 + MGP_BALBcJ_P0028961 Fstl4 protein_coding protein_coding MGP_BALBcJ_T0032156.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97849479 97880898 - MGP_BALBcJ_P0032156 Top2a protein_coding protein_coding MGP_BALBcJ_T0032157.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97849607 97852261 - Top2a protein_coding processed_transcript MGP_BALBcJ_T0032158.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97850003 97851907 - Top2a protein_coding processed_transcript MGP_BALBcJ_T0032159.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97850340 97880775 - MGP_BALBcJ_P0032159 Top2a protein_coding unknown_likely_coding MGP_BALBcJ_T0032160.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97856483 97857797 - Top2a protein_coding processed_transcript MGP_BALBcJ_T0032161.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97860161 97863059 - Top2a protein_coding processed_transcript MGP_BALBcJ_T0032162.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97873301 97878919 - Top2a protein_coding processed_transcript MGP_BALBcJ_T0032163.1 MGP_BALBcJ_G0019022.1 mouse_genomes_project 11 97878793 97880887 - Top2a protein_coding processed_transcript MGP_BALBcJ_T0028270.1 MGP_BALBcJ_G0018041.1 mouse_genomes_project 11 25551116 25752091 - MGP_BALBcJ_P0028270 Ccdc85a protein_coding protein_coding MGP_BALBcJ_T0028271.1 MGP_BALBcJ_G0018041.1 mouse_genomes_project 11 25551123 25752091 - MGP_BALBcJ_P0028271 Ccdc85a protein_coding protein_coding MGP_BALBcJ_T0028272.1 MGP_BALBcJ_G0018041.1 mouse_genomes_project 11 25551123 25752119 - MGP_BALBcJ_P0028272 Ccdc85a protein_coding protein_coding MGP_BALBcJ_T0028273.1 MGP_BALBcJ_G0018041.1 mouse_genomes_project 11 25552583 25751790 - MGP_BALBcJ_P0028273 Ccdc85a protein_coding protein_coding MGP_BALBcJ_T0028274.1 MGP_BALBcJ_G0018041.1 mouse_genomes_project 11 25554275 25745951 - MGP_BALBcJ_P0028274 Ccdc85a protein_coding protein_coding MGP_BALBcJ_T0028275.1 MGP_BALBcJ_G0018041.1 mouse_genomes_project 11 25744723 25752061 - Ccdc85a protein_coding retained_intron MGP_BALBcJ_T0033669.1 MGP_BALBcJ_G0019380.1 mouse_genomes_project 11 115926780 115946566 - MGP_BALBcJ_P0033669 St6galnac2 protein_coding protein_coding MGP_BALBcJ_T0033670.1 MGP_BALBcJ_G0019380.1 mouse_genomes_project 11 115927366 115931161 - St6galnac2 protein_coding processed_transcript MGP_BALBcJ_T0033671.1 MGP_BALBcJ_G0019380.1 mouse_genomes_project 11 115928960 115932773 - St6galnac2 protein_coding processed_transcript MGP_BALBcJ_T0033672.1 MGP_BALBcJ_G0019380.1 mouse_genomes_project 11 115933165 115936299 - St6galnac2 protein_coding processed_transcript MGP_BALBcJ_T0033673.1 MGP_BALBcJ_G0019380.1 mouse_genomes_project 11 115936398 115937400 - St6galnac2 protein_coding processed_transcript MGP_BALBcJ_T0033674.1 MGP_BALBcJ_G0019380.1 mouse_genomes_project 11 115941271 115946307 - St6galnac2 protein_coding processed_transcript MGP_BALBcJ_T0032104.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97556056 97580282 - Med24 protein_coding retained_intron MGP_BALBcJ_T0032105.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97556056 97580883 - MGP_BALBcJ_P0032105 Med24 protein_coding protein_coding MGP_BALBcJ_T0032106.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97556308 97557946 - Med24 protein_coding retained_intron MGP_BALBcJ_T0032107.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97556365 97580858 - MGP_BALBcJ_P0032107 Med24 protein_coding protein_coding MGP_BALBcJ_T0032108.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97556365 97580815 - MGP_BALBcJ_P0032108 Med24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032109.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97557892 97558717 - Med24 protein_coding retained_intron MGP_BALBcJ_T0032110.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97558731 97559469 - Med24 protein_coding processed_transcript MGP_BALBcJ_T0032111.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97560307 97580866 - Med24 protein_coding retained_intron MGP_BALBcJ_T0032112.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97561111 97562532 - Med24 protein_coding retained_intron MGP_BALBcJ_T0032113.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97569360 97570261 - Med24 protein_coding processed_transcript MGP_BALBcJ_T0032114.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97570001 97580822 - MGP_BALBcJ_P0032114 Med24 protein_coding protein_coding MGP_BALBcJ_T0032115.1 MGP_BALBcJ_G0019012.1 mouse_genomes_project 11 97570088 97580851 - Med24 protein_coding retained_intron MGP_BALBcJ_T0033093.1 MGP_BALBcJ_G0019262.1 mouse_genomes_project 11 106546996 106565523 + MGP_BALBcJ_P0033093 Psmd12 protein_coding protein_coding MGP_BALBcJ_T0033094.1 MGP_BALBcJ_G0019262.1 mouse_genomes_project 11 106547040 106571655 + MGP_BALBcJ_P0033094 Psmd12 protein_coding protein_coding MGP_BALBcJ_T0033095.1 MGP_BALBcJ_G0019262.1 mouse_genomes_project 11 106547089 106565088 + MGP_BALBcJ_P0033095 Psmd12 protein_coding protein_coding MGP_BALBcJ_T0029353.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58035187 58130668 + Rai1 protein_coding processed_transcript MGP_BALBcJ_T0029354.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58035187 58130666 + MGP_BALBcJ_P0029354 Rai1 protein_coding protein_coding MGP_BALBcJ_T0029355.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58035351 58116902 + MGP_BALBcJ_P0029355 Rai1 protein_coding protein_coding MGP_BALBcJ_T0029356.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58070192 58130666 + MGP_BALBcJ_P0029356 Rai1 protein_coding protein_coding MGP_BALBcJ_T0029357.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58070194 58123496 + MGP_BALBcJ_P0029357 Rai1 protein_coding protein_coding MGP_BALBcJ_T0029358.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58070369 58071364 + Rai1 protein_coding processed_transcript MGP_BALBcJ_T0029359.1 MGP_BALBcJ_G0018352.1 mouse_genomes_project 11 58107349 58130668 + MGP_BALBcJ_P0029359 Rai1 protein_coding protein_coding MGP_BALBcJ_T0033268.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113961803 113983540 + Kif19a protein_coding processed_transcript MGP_BALBcJ_T0033269.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113961803 113983540 + Kif19a protein_coding processed_transcript MGP_BALBcJ_T0033270.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113961803 113985496 + MGP_BALBcJ_P0033270 Kif19a protein_coding protein_coding MGP_BALBcJ_T0033271.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113961804 113987937 + MGP_BALBcJ_P0033271 Kif19a protein_coding protein_coding MGP_BALBcJ_T0033272.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113982019 113982928 + Kif19a protein_coding retained_intron MGP_BALBcJ_T0033273.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113985263 113988101 + MGP_BALBcJ_P0033273 Kif19a protein_coding protein_coding MGP_BALBcJ_T0033274.1 MGP_BALBcJ_G0019301.1 mouse_genomes_project 11 113985305 113986694 + Kif19a protein_coding retained_intron MGP_BALBcJ_T0032215.1 MGP_BALBcJ_G0019055.1 mouse_genomes_project 11 98632069 98632147 - MGP_BALBcJ_P0032215 Gm14180 protein_coding protein_coding MGP_BALBcJ_T0102149.1 MGP_BALBcJ_G0039966.1 mouse_genomes_project 11 74453380 74453842 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012565.1 MGP_BALBcJ_G0010662.1 mouse_genomes_project 11 46940468 46941380 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027594.1 MGP_BALBcJ_G0017892.1 mouse_genomes_project 11 19981 44503 - protein_coding processed_transcript MGP_BALBcJ_T0027595.1 MGP_BALBcJ_G0017892.1 mouse_genomes_project 11 34925 75908 - MGP_BALBcJ_P0027595 protein_coding protein_coding MGP_BALBcJ_T0027596.1 MGP_BALBcJ_G0017892.1 mouse_genomes_project 11 35211 66797 - MGP_BALBcJ_P0027596 protein_coding protein_coding MGP_BALBcJ_T0027964.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3602507 3612952 - MGP_BALBcJ_P0027964 Tbrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027965.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3602508 3612976 - MGP_BALBcJ_P0027965 Tbrg4 protein_coding protein_coding MGP_BALBcJ_T0027966.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3603327 3612952 - MGP_BALBcJ_P0027966 Tbrg4 protein_coding protein_coding MGP_BALBcJ_T0027967.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3603329 3612952 - MGP_BALBcJ_P0027967 Tbrg4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027968.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3604158 3604934 - Tbrg4 protein_coding retained_intron MGP_BALBcJ_T0027969.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3606460 3607818 - Tbrg4 protein_coding processed_transcript MGP_BALBcJ_T0027970.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3606490 3607348 - Tbrg4 protein_coding retained_intron MGP_BALBcJ_T0027971.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3606904 3608154 - Tbrg4 protein_coding retained_intron MGP_BALBcJ_T0027972.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3607082 3607968 - Tbrg4 protein_coding processed_transcript MGP_BALBcJ_T0027973.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3607899 3612976 - MGP_BALBcJ_P0027973 Tbrg4 protein_coding protein_coding MGP_BALBcJ_T0027974.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3610108 3612931 - Tbrg4 protein_coding processed_transcript MGP_BALBcJ_T0027975.1 MGP_BALBcJ_G0017969.1 mouse_genomes_project 11 3610801 3612376 - MGP_BALBcJ_P0027975 Tbrg4 protein_coding protein_coding MGP_BALBcJ_T0003256.1 MGP_BALBcJ_G0003009.1 mouse_genomes_project 11 95120289 95126076 - Gm11536 antisense antisense MGP_BALBcJ_T0012616.1 MGP_BALBcJ_G0010713.1 mouse_genomes_project 11 60342235 60342536 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099292.1 MGP_BALBcJ_G0037328.1 mouse_genomes_project 11 100365692 100365872 - Gm25475 snRNA snRNA MGP_BALBcJ_T0100532.1 MGP_BALBcJ_G0038568.1 mouse_genomes_project 11 76936885 76936976 - Gm22947 snoRNA snoRNA MGP_BALBcJ_T0009689.1 MGP_BALBcJ_G0007814.1 mouse_genomes_project 11 73602472 73602587 - miRNA miRNA MGP_BALBcJ_T0012703.1 MGP_BALBcJ_G0010800.1 mouse_genomes_project 11 95024272 95025608 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003160.1 MGP_BALBcJ_G0002933.1 mouse_genomes_project 11 55953099 55955562 + Gm12246 antisense antisense MGP_BALBcJ_T0032732.1 MGP_BALBcJ_G0019182.1 mouse_genomes_project 11 101620602 101624284 + MGP_BALBcJ_P0032732 Fzd2 protein_coding protein_coding MGP_BALBcJ_T0032895.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103562285 103602253 + MGP_BALBcJ_P0032895 Myl4 protein_coding protein_coding MGP_BALBcJ_T0032896.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103589662 103600785 + MGP_BALBcJ_P0032896 Myl4 protein_coding protein_coding MGP_BALBcJ_T0032897.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103591944 103602253 + MGP_BALBcJ_P0032897 Myl4 protein_coding protein_coding MGP_BALBcJ_T0032898.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103591976 103600051 + MGP_BALBcJ_P0032898 Myl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032899.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103592275 103602253 + MGP_BALBcJ_P0032899 Myl4 protein_coding protein_coding MGP_BALBcJ_T0032900.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103595321 103602247 + Myl4 protein_coding retained_intron MGP_BALBcJ_T0032901.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103597034 103601384 + Myl4 protein_coding retained_intron MGP_BALBcJ_T0032902.1 MGP_BALBcJ_G0019219.1 mouse_genomes_project 11 103600000 103610807 + MGP_BALBcJ_P0032902 Myl4 protein_coding protein_coding MGP_BALBcJ_T0031091.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78808198 78821990 + MGP_BALBcJ_P0031091 Zfp207 protein_coding protein_coding MGP_BALBcJ_T0031092.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78808198 78831402 + MGP_BALBcJ_P0031092 Zfp207 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031093.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78808222 78821993 + MGP_BALBcJ_P0031093 Zfp207 protein_coding protein_coding MGP_BALBcJ_T0031094.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78808250 78820026 + MGP_BALBcJ_P0031094 Zfp207 protein_coding protein_coding MGP_BALBcJ_T0031095.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78808316 78821311 + MGP_BALBcJ_P0031095 Zfp207 protein_coding protein_coding MGP_BALBcJ_T0031096.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78811621 78817626 + MGP_BALBcJ_P0031096 Zfp207 protein_coding protein_coding MGP_BALBcJ_T0031097.1 MGP_BALBcJ_G0018752.1 mouse_genomes_project 11 78814886 78830490 + MGP_BALBcJ_P0031097 Zfp207 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028004.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6078505 6096655 + MGP_BALBcJ_P0028004 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028005.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6078509 6096661 + MGP_BALBcJ_P0028005 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028006.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6078647 6095220 + MGP_BALBcJ_P0028006 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028007.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6078909 6096658 + MGP_BALBcJ_P0028007 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028008.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6078950 6093813 + MGP_BALBcJ_P0028008 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028009.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6079029 6080076 + Upp1 protein_coding retained_intron MGP_BALBcJ_T0028010.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6079189 6093742 + MGP_BALBcJ_P0028010 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028011.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6086212 6095240 + MGP_BALBcJ_P0028011 Upp1 protein_coding protein_coding MGP_BALBcJ_T0028012.1 MGP_BALBcJ_G0017981.1 mouse_genomes_project 11 6093505 6096573 + Upp1 protein_coding retained_intron MGP_BALBcJ_T0017223.1 MGP_BALBcJ_G0015151.1 mouse_genomes_project 11 106492246 106499581 + Gm11714 processed_transcript processed_transcript MGP_BALBcJ_T0027628.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 216097 228640 + MGP_BALBcJ_P0027628 Pik3ip1 protein_coding protein_coding MGP_BALBcJ_T0027629.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 216424 217799 + Pik3ip1 protein_coding retained_intron MGP_BALBcJ_T0027630.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 216483 227352 + MGP_BALBcJ_P0027630 Pik3ip1 protein_coding protein_coding MGP_BALBcJ_T0027631.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 216489 219658 + Pik3ip1 protein_coding retained_intron MGP_BALBcJ_T0027632.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 216504 219660 + MGP_BALBcJ_P0027632 Pik3ip1 protein_coding protein_coding MGP_BALBcJ_T0027633.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 217767 219375 + Pik3ip1 protein_coding retained_intron MGP_BALBcJ_T0027634.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 217804 227343 + MGP_BALBcJ_P0027634 Pik3ip1 protein_coding protein_coding MGP_BALBcJ_T0027635.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 218146 227361 + MGP_BALBcJ_P0027635 Pik3ip1 protein_coding protein_coding MGP_BALBcJ_T0027636.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 218667 219656 + Pik3ip1 protein_coding processed_transcript MGP_BALBcJ_T0027637.1 MGP_BALBcJ_G0017896.1 mouse_genomes_project 11 220074 227674 + Pik3ip1 protein_coding processed_transcript MGP_BALBcJ_T0031800.1 MGP_BALBcJ_G0018934.1 mouse_genomes_project 11 94719229 94768885 - MGP_BALBcJ_P0031800 Igf2bp1 protein_coding protein_coding MGP_BALBcJ_T0031801.1 MGP_BALBcJ_G0018934.1 mouse_genomes_project 11 94726430 94730838 - Igf2bp1 protein_coding processed_transcript MGP_BALBcJ_T0031802.1 MGP_BALBcJ_G0018934.1 mouse_genomes_project 11 94736447 94745898 - Igf2bp1 protein_coding processed_transcript MGP_BALBcJ_T0031803.1 MGP_BALBcJ_G0018934.1 mouse_genomes_project 11 94737282 94745915 - Igf2bp1 protein_coding processed_transcript MGP_BALBcJ_T0031804.1 MGP_BALBcJ_G0018934.1 mouse_genomes_project 11 94741685 94745912 - Igf2bp1 protein_coding processed_transcript MGP_BALBcJ_T0012761.1 MGP_BALBcJ_G0010858.1 mouse_genomes_project 11 115801853 115802087 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027650.1 MGP_BALBcJ_G0017898.1 mouse_genomes_project 11 301157 338671 - MGP_BALBcJ_P0027650 Rnf185 protein_coding protein_coding MGP_BALBcJ_T0027651.1 MGP_BALBcJ_G0017898.1 mouse_genomes_project 11 301157 338671 - MGP_BALBcJ_P0027651 Rnf185 protein_coding protein_coding MGP_BALBcJ_T0027652.1 MGP_BALBcJ_G0017898.1 mouse_genomes_project 11 303051 338642 - Rnf185 protein_coding processed_transcript MGP_BALBcJ_T0033186.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109131401 109207019 - MGP_BALBcJ_P0033186 Abca8a protein_coding protein_coding MGP_BALBcJ_T0033187.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109131403 109206978 - MGP_BALBcJ_P0033187 Abca8a protein_coding protein_coding MGP_BALBcJ_T0033188.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109131403 109206978 - MGP_BALBcJ_P0033188 Abca8a protein_coding protein_coding MGP_BALBcJ_T0033189.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109132614 109135846 - Abca8a protein_coding processed_transcript MGP_BALBcJ_T0033190.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109169207 109171640 - Abca8a protein_coding processed_transcript MGP_BALBcJ_T0033191.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109179869 109181454 - Abca8a protein_coding processed_transcript MGP_BALBcJ_T0033192.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109181387 109186732 - MGP_BALBcJ_P0033192 Abca8a protein_coding protein_coding MGP_BALBcJ_T0033193.1 MGP_BALBcJ_G0019283.1 mouse_genomes_project 11 109195220 109206978 - MGP_BALBcJ_P0033193 Abca8a protein_coding protein_coding MGP_BALBcJ_T0033742.1 MGP_BALBcJ_G0019393.1 mouse_genomes_project 11 117024461 117026910 + MGP_BALBcJ_P0033742 Tmc8 protein_coding protein_coding MGP_BALBcJ_T0033743.1 MGP_BALBcJ_G0019393.1 mouse_genomes_project 11 117025056 117035958 + MGP_BALBcJ_P0033743 Tmc8 protein_coding protein_coding MGP_BALBcJ_T0033744.1 MGP_BALBcJ_G0019393.1 mouse_genomes_project 11 117025074 117036040 + MGP_BALBcJ_P0033744 Tmc8 protein_coding protein_coding MGP_BALBcJ_T0033745.1 MGP_BALBcJ_G0019393.1 mouse_genomes_project 11 117025144 117035813 + MGP_BALBcJ_P0033745 Tmc8 protein_coding protein_coding MGP_BALBcJ_T0033746.1 MGP_BALBcJ_G0019393.1 mouse_genomes_project 11 117025417 117036013 + MGP_BALBcJ_P0033746 Tmc8 protein_coding protein_coding MGP_BALBcJ_T0033747.1 MGP_BALBcJ_G0019393.1 mouse_genomes_project 11 117034117 117035543 + Tmc8 protein_coding retained_intron MGP_BALBcJ_T0099255.1 MGP_BALBcJ_G0037291.1 mouse_genomes_project 11 63645180 63645290 + Gm26128 snRNA snRNA MGP_BALBcJ_T0027831.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2036886 2044043 + MGP_BALBcJ_P0027831 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027832.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2037037 2038548 + Rhbdd3 protein_coding processed_transcript MGP_BALBcJ_T0027833.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2037233 2038468 + Rhbdd3 protein_coding processed_transcript MGP_BALBcJ_T0027834.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2037393 2041301 + MGP_BALBcJ_P0027834 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027835.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2037399 2044043 + MGP_BALBcJ_P0027835 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027836.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2037436 2041206 + MGP_BALBcJ_P0027836 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027837.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2037568 2041212 + MGP_BALBcJ_P0027837 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027838.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2038117 2044043 + MGP_BALBcJ_P0027838 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027839.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2038130 2043180 + MGP_BALBcJ_P0027839 Rhbdd3 protein_coding protein_coding MGP_BALBcJ_T0027840.1 MGP_BALBcJ_G0017938.1 mouse_genomes_project 11 2038197 2044045 + Rhbdd3 protein_coding processed_transcript MGP_BALBcJ_T0009742.1 MGP_BALBcJ_G0007867.1 mouse_genomes_project 11 116296792 116296902 + Mir6516 miRNA miRNA MGP_BALBcJ_T0006192.1 MGP_BALBcJ_G0005173.1 mouse_genomes_project 11 34972523 34986727 + Gm12128 lincRNA lincRNA MGP_BALBcJ_T0033510.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115220532 115252988 + MGP_BALBcJ_P0033510 Itgb4 protein_coding protein_coding MGP_BALBcJ_T0033511.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115220548 115252987 + MGP_BALBcJ_P0033511 Itgb4 protein_coding protein_coding MGP_BALBcJ_T0033512.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115220548 115252987 + MGP_BALBcJ_P0033512 Itgb4 protein_coding protein_coding MGP_BALBcJ_T0033513.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115220666 115240386 + Itgb4 protein_coding processed_transcript MGP_BALBcJ_T0033514.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115220802 115252988 + MGP_BALBcJ_P0033514 Itgb4 protein_coding protein_coding MGP_BALBcJ_T0033515.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115223609 115252988 + MGP_BALBcJ_P0033515 Itgb4 protein_coding protein_coding MGP_BALBcJ_T0033516.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115223609 115252988 + MGP_BALBcJ_P0033516 Itgb4 protein_coding protein_coding MGP_BALBcJ_T0033517.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115235710 115236810 + Itgb4 protein_coding processed_transcript MGP_BALBcJ_T0033518.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115236711 115237733 + Itgb4 protein_coding processed_transcript MGP_BALBcJ_T0033519.1 MGP_BALBcJ_G0019351.1 mouse_genomes_project 11 115238557 115239956 + Itgb4 protein_coding processed_transcript MGP_BALBcJ_T0033620.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115720254 115740537 - Prpsap1 protein_coding processed_transcript MGP_BALBcJ_T0033621.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115720254 115740571 - MGP_BALBcJ_P0033621 Prpsap1 protein_coding protein_coding MGP_BALBcJ_T0033622.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115720708 115727743 - Prpsap1 protein_coding processed_transcript MGP_BALBcJ_T0033623.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115720785 115722653 - Prpsap1 protein_coding processed_transcript MGP_BALBcJ_T0033624.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115720809 115727162 - Prpsap1 protein_coding processed_transcript MGP_BALBcJ_T0033625.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115727482 115744416 - MGP_BALBcJ_P0033625 Prpsap1 protein_coding protein_coding MGP_BALBcJ_T0033626.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115727714 115740512 - Prpsap1 protein_coding processed_transcript MGP_BALBcJ_T0033627.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115727956 115740558 - MGP_BALBcJ_P0033627 Prpsap1 protein_coding protein_coding MGP_BALBcJ_T0033628.1 MGP_BALBcJ_G0019372.1 mouse_genomes_project 11 115735091 115740550 - Prpsap1 protein_coding processed_transcript MGP_BALBcJ_T0006166.1 MGP_BALBcJ_G0005153.1 mouse_genomes_project 11 21285197 21301383 + Gm12066 lincRNA lincRNA MGP_BALBcJ_T0098462.1 MGP_BALBcJ_G0036516.1 mouse_genomes_project 11 72584681 72584800 + n-R5s71 rRNA rRNA MGP_BALBcJ_T0028237.1 MGP_BALBcJ_G0018033.1 mouse_genomes_project 11 20806816 20846095 - MGP_BALBcJ_P0028237 Rel protein_coding protein_coding MGP_BALBcJ_T0028158.1 MGP_BALBcJ_G0018016.1 mouse_genomes_project 11 19044711 19051554 - MGP_BALBcJ_P0028158 Otx1 protein_coding protein_coding MGP_BALBcJ_T0028159.1 MGP_BALBcJ_G0018016.1 mouse_genomes_project 11 19044716 19051649 - Otx1 protein_coding retained_intron MGP_BALBcJ_T0028160.1 MGP_BALBcJ_G0018016.1 mouse_genomes_project 11 19046783 19052816 - MGP_BALBcJ_P0028160 Otx1 protein_coding protein_coding MGP_BALBcJ_T0006254.1 MGP_BALBcJ_G0005226.1 mouse_genomes_project 11 75818968 75820517 + 2210008F06Rik lincRNA lincRNA MGP_BALBcJ_T0006265.1 MGP_BALBcJ_G0005233.1 mouse_genomes_project 11 81077592 81080549 + Gm11426 lincRNA lincRNA MGP_BALBcJ_T0033357.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624209 114633279 + MGP_BALBcJ_P0033357 Ict1 protein_coding protein_coding MGP_BALBcJ_T0033358.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624211 114633267 + MGP_BALBcJ_P0033358 Ict1 protein_coding protein_coding MGP_BALBcJ_T0033359.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624214 114631524 + MGP_BALBcJ_P0033359 Ict1 protein_coding protein_coding MGP_BALBcJ_T0033360.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624224 114630658 + Ict1 protein_coding retained_intron MGP_BALBcJ_T0033361.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624228 114630866 + MGP_BALBcJ_P0033361 Ict1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033362.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624234 114631364 + Ict1 protein_coding processed_transcript MGP_BALBcJ_T0033363.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624239 114630856 + Ict1 protein_coding retained_intron MGP_BALBcJ_T0033364.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114624279 114631329 + Ict1 protein_coding processed_transcript MGP_BALBcJ_T0033365.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114630465 114631324 + Ict1 protein_coding retained_intron MGP_BALBcJ_T0033366.1 MGP_BALBcJ_G0019327.1 mouse_genomes_project 11 114630764 114631513 + Ict1 protein_coding retained_intron MGP_BALBcJ_T0101847.1 MGP_BALBcJ_G0039766.1 mouse_genomes_project 11 72482336 72493159 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101848.1 MGP_BALBcJ_G0039766.1 mouse_genomes_project 11 72482811 72483747 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0000834.1 MGP_BALBcJ_G0000766.1 mouse_genomes_project 11 15443446 15444042 + TEC TEC MGP_BALBcJ_T0032602.1 MGP_BALBcJ_G0019164.1 mouse_genomes_project 11 101143082 101147036 + Nags protein_coding processed_transcript MGP_BALBcJ_T0032603.1 MGP_BALBcJ_G0019164.1 mouse_genomes_project 11 101143118 101147036 + MGP_BALBcJ_P0032603 Nags protein_coding protein_coding MGP_BALBcJ_T0032604.1 MGP_BALBcJ_G0019164.1 mouse_genomes_project 11 101143923 101147036 + Nags protein_coding processed_transcript MGP_BALBcJ_T0033455.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115007656 115040726 + MGP_BALBcJ_P0033455 Tmem94 protein_coding protein_coding MGP_BALBcJ_T0033456.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115007665 115027250 + MGP_BALBcJ_P0033456 Tmem94 protein_coding protein_coding MGP_BALBcJ_T0033457.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115007666 115027574 + MGP_BALBcJ_P0033457 Tmem94 protein_coding protein_coding MGP_BALBcJ_T0033458.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115007677 115027493 + MGP_BALBcJ_P0033458 Tmem94 protein_coding protein_coding MGP_BALBcJ_T0033459.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115008944 115017380 + Tmem94 protein_coding processed_transcript MGP_BALBcJ_T0033460.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115015770 115040393 + MGP_BALBcJ_P0033460 Tmem94 protein_coding protein_coding MGP_BALBcJ_T0033461.1 MGP_BALBcJ_G0019342.1 mouse_genomes_project 11 115030307 115033338 + MGP_BALBcJ_P0033461 Tmem94 protein_coding protein_coding MGP_BALBcJ_T0031187.1 MGP_BALBcJ_G0018781.1 mouse_genomes_project 11 81690301 81705137 + MGP_BALBcJ_P0031187 Slfn4 protein_coding protein_coding MGP_BALBcJ_T0031188.1 MGP_BALBcJ_G0018781.1 mouse_genomes_project 11 81690309 81704965 + MGP_BALBcJ_P0031188 Slfn4 protein_coding protein_coding MGP_BALBcJ_T0006338.1 MGP_BALBcJ_G0005285.1 mouse_genomes_project 11 115559201 115561848 + Gm26730 lincRNA lincRNA MGP_BALBcJ_T0099271.1 MGP_BALBcJ_G0037307.1 mouse_genomes_project 11 81040011 81040118 - Gm24612 snRNA snRNA MGP_BALBcJ_T0029598.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60539502 60548635 - MGP_BALBcJ_P0029598 Cenpv protein_coding unknown_likely_coding MGP_BALBcJ_T0029599.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60539506 60554145 - MGP_BALBcJ_P0029599 Cenpv protein_coding protein_coding MGP_BALBcJ_T0029600.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60539509 60542457 - Cenpv protein_coding retained_intron MGP_BALBcJ_T0029601.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60539703 60553369 - Cenpv protein_coding processed_transcript MGP_BALBcJ_T0029602.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60542053 60553513 - Cenpv protein_coding processed_transcript MGP_BALBcJ_T0029603.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60548447 60553887 - MGP_BALBcJ_P0029603 Cenpv protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029604.1 MGP_BALBcJ_G0018395.1 mouse_genomes_project 11 60548678 60553887 - Cenpv protein_coding processed_transcript MGP_BALBcJ_T0003191.1 MGP_BALBcJ_G0002959.1 mouse_genomes_project 11 65234450 65237997 - 9430073C21Rik antisense antisense MGP_BALBcJ_T0032566.1 MGP_BALBcJ_G0019155.1 mouse_genomes_project 11 100870110 100887404 - MGP_BALBcJ_P0032566 Meox1 protein_coding protein_coding MGP_BALBcJ_T0032733.1 MGP_BALBcJ_G0019183.1 mouse_genomes_project 11 101680753 101692693 + MGP_BALBcJ_P0032733 Meioc protein_coding protein_coding MGP_BALBcJ_T0032734.1 MGP_BALBcJ_G0019183.1 mouse_genomes_project 11 101682627 101699550 + MGP_BALBcJ_P0032734 Meioc protein_coding protein_coding MGP_BALBcJ_T0032735.1 MGP_BALBcJ_G0019183.1 mouse_genomes_project 11 101682662 101691509 + Meioc protein_coding processed_transcript MGP_BALBcJ_T0028836.1 MGP_BALBcJ_G0018192.1 mouse_genomes_project 11 48421374 48423128 + Grm6 protein_coding processed_transcript MGP_BALBcJ_T0028837.1 MGP_BALBcJ_G0018192.1 mouse_genomes_project 11 48421374 48436922 + MGP_BALBcJ_P0028837 Grm6 protein_coding protein_coding MGP_BALBcJ_T0028838.1 MGP_BALBcJ_G0018192.1 mouse_genomes_project 11 48421675 48436893 + MGP_BALBcJ_P0028838 Grm6 protein_coding protein_coding MGP_BALBcJ_T0028839.1 MGP_BALBcJ_G0018192.1 mouse_genomes_project 11 48427513 48436924 + Grm6 protein_coding processed_transcript MGP_BALBcJ_T0028688.1 MGP_BALBcJ_G0018152.1 mouse_genomes_project 11 46422658 46592115 + MGP_BALBcJ_P0028688 Olfr56 protein_coding protein_coding MGP_BALBcJ_T0028689.1 MGP_BALBcJ_G0018152.1 mouse_genomes_project 11 46422658 46592115 + MGP_BALBcJ_P0028689 Olfr56 protein_coding protein_coding MGP_BALBcJ_T0028690.1 MGP_BALBcJ_G0018152.1 mouse_genomes_project 11 46422658 46592115 + MGP_BALBcJ_P0028690 Olfr56 protein_coding protein_coding MGP_BALBcJ_T0028698.1 MGP_BALBcJ_G0018152.1 mouse_genomes_project 11 46542849 46582816 + Olfr56 protein_coding retained_intron MGP_BALBcJ_T0028700.1 MGP_BALBcJ_G0018152.1 mouse_genomes_project 11 46542867 46592048 + MGP_BALBcJ_P0028700 Olfr56 protein_coding protein_coding MGP_BALBcJ_T0028703.1 MGP_BALBcJ_G0018152.1 mouse_genomes_project 11 46574069 46592047 + MGP_BALBcJ_P0028703 Olfr56 protein_coding protein_coding MGP_BALBcJ_T0031563.1 MGP_BALBcJ_G0018879.1 mouse_genomes_project 11 88998303 89053282 - MGP_BALBcJ_P0031563 Hlf protein_coding protein_coding MGP_BALBcJ_T0031564.1 MGP_BALBcJ_G0018879.1 mouse_genomes_project 11 89000757 89052077 - Hlf protein_coding processed_transcript MGP_BALBcJ_T0031565.1 MGP_BALBcJ_G0018879.1 mouse_genomes_project 11 89000909 89050594 - Hlf protein_coding processed_transcript MGP_BALBcJ_T0031566.1 MGP_BALBcJ_G0018879.1 mouse_genomes_project 11 89002594 89043702 - Hlf protein_coding processed_transcript MGP_BALBcJ_T0031567.1 MGP_BALBcJ_G0018879.1 mouse_genomes_project 11 89007312 89050360 - MGP_BALBcJ_P0031567 Hlf protein_coding protein_coding MGP_BALBcJ_T0031568.1 MGP_BALBcJ_G0018879.1 mouse_genomes_project 11 89050309 89051977 - Hlf protein_coding processed_transcript MGP_BALBcJ_T0030829.1 MGP_BALBcJ_G0018692.1 mouse_genomes_project 11 75869563 75943127 - MGP_BALBcJ_P0030829 Taok1 protein_coding unknown_likely_coding MGP_BALBcJ_T0030270.1 MGP_BALBcJ_G0018549.1 mouse_genomes_project 11 68815589 68818379 - MGP_BALBcJ_P0030270 Pfn1 protein_coding protein_coding MGP_BALBcJ_T0030271.1 MGP_BALBcJ_G0018549.1 mouse_genomes_project 11 68815673 68818356 - MGP_BALBcJ_P0030271 Pfn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030272.1 MGP_BALBcJ_G0018549.1 mouse_genomes_project 11 68816346 68818343 - Pfn1 protein_coding retained_intron MGP_BALBcJ_T0030273.1 MGP_BALBcJ_G0018549.1 mouse_genomes_project 11 68816356 68818333 - MGP_BALBcJ_P0030273 Pfn1 protein_coding protein_coding MGP_BALBcJ_T0003248.1 MGP_BALBcJ_G0003003.1 mouse_genomes_project 11 94069854 94071298 - Gm11521 antisense antisense MGP_BALBcJ_T0006331.1 MGP_BALBcJ_G0005279.1 mouse_genomes_project 11 113270161 113274076 + 1700025D23Rik lincRNA lincRNA MGP_BALBcJ_T0028511.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38045268 38058768 - MGP_BALBcJ_P0028511 Mat2b protein_coding protein_coding MGP_BALBcJ_T0028512.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38045268 38061194 - MGP_BALBcJ_P0028512 Mat2b protein_coding protein_coding MGP_BALBcJ_T0028513.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38046611 38058615 - MGP_BALBcJ_P0028513 Mat2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028514.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38046665 38051233 - Mat2b protein_coding retained_intron MGP_BALBcJ_T0028515.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38050712 38051826 - Mat2b protein_coding retained_intron MGP_BALBcJ_T0028516.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38051491 38058622 - Mat2b protein_coding retained_intron MGP_BALBcJ_T0028517.1 MGP_BALBcJ_G0018102.1 mouse_genomes_project 11 38053345 38060978 - Mat2b protein_coding retained_intron MGP_BALBcJ_T0003103.1 MGP_BALBcJ_G0002884.1 mouse_genomes_project 11 8551839 8573842 + Gm11998 antisense antisense MGP_BALBcJ_T0029241.1 MGP_BALBcJ_G0018317.1 mouse_genomes_project 11 56746924 56752722 + MGP_BALBcJ_P0029241 protein_coding protein_coding MGP_BALBcJ_T0029232.1 MGP_BALBcJ_G0018311.1 mouse_genomes_project 11 56583203 56584440 - MGP_BALBcJ_P0029232 protein_coding protein_coding MGP_BALBcJ_T0030512.1 MGP_BALBcJ_G0018605.1 mouse_genomes_project 11 71635762 71639203 - MGP_BALBcJ_P0030512 Olfr378 protein_coding protein_coding MGP_BALBcJ_T0032964.1 MGP_BALBcJ_G0019235.1 mouse_genomes_project 11 105108952 105182391 + MGP_BALBcJ_P0032964 Map3k3 protein_coding protein_coding MGP_BALBcJ_T0032965.1 MGP_BALBcJ_G0019235.1 mouse_genomes_project 11 105178156 105179323 + Map3k3 protein_coding processed_transcript MGP_BALBcJ_T0032966.1 MGP_BALBcJ_G0019235.1 mouse_genomes_project 11 105179008 105181085 + Map3k3 protein_coding processed_transcript MGP_BALBcJ_T0034208.1 MGP_BALBcJ_G0019488.1 mouse_genomes_project 11 120616791 120647364 - MGP_BALBcJ_P0034208 Wdr45b protein_coding protein_coding MGP_BALBcJ_T0034209.1 MGP_BALBcJ_G0019488.1 mouse_genomes_project 11 120618724 120631994 - Wdr45b protein_coding processed_transcript MGP_BALBcJ_T0034210.1 MGP_BALBcJ_G0019488.1 mouse_genomes_project 11 120621585 120647260 - MGP_BALBcJ_P0034210 Wdr45b protein_coding protein_coding MGP_BALBcJ_T0034211.1 MGP_BALBcJ_G0019488.1 mouse_genomes_project 11 120625866 120647312 - MGP_BALBcJ_P0034211 Wdr45b protein_coding protein_coding MGP_BALBcJ_T0034212.1 MGP_BALBcJ_G0019488.1 mouse_genomes_project 11 120639974 120647320 - Wdr45b protein_coding retained_intron MGP_BALBcJ_T0003207.1 MGP_BALBcJ_G0002971.1 mouse_genomes_project 11 73270946 73271668 - Gm28180 antisense antisense MGP_BALBcJ_T0031593.1 MGP_BALBcJ_G0018885.1 mouse_genomes_project 11 92514995 92541490 - Utp18 protein_coding processed_transcript MGP_BALBcJ_T0031594.1 MGP_BALBcJ_G0018885.1 mouse_genomes_project 11 92514995 92541490 - MGP_BALBcJ_P0031594 Utp18 protein_coding protein_coding MGP_BALBcJ_T0031595.1 MGP_BALBcJ_G0018885.1 mouse_genomes_project 11 92531125 92531886 - Utp18 protein_coding processed_transcript MGP_BALBcJ_T0012737.1 MGP_BALBcJ_G0010834.1 mouse_genomes_project 11 104793507 104794774 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033375.1 MGP_BALBcJ_G0019329.1 mouse_genomes_project 11 114640716 114651911 + MGP_BALBcJ_P0033375 protein_coding protein_coding MGP_BALBcJ_T0033376.1 MGP_BALBcJ_G0019329.1 mouse_genomes_project 11 114640738 114651911 + MGP_BALBcJ_P0033376 protein_coding protein_coding MGP_BALBcJ_T0033377.1 MGP_BALBcJ_G0019329.1 mouse_genomes_project 11 114640770 114650678 + MGP_BALBcJ_P0033377 protein_coding protein_coding MGP_BALBcJ_T0033378.1 MGP_BALBcJ_G0019329.1 mouse_genomes_project 11 114640917 114643031 + protein_coding retained_intron MGP_BALBcJ_T0033379.1 MGP_BALBcJ_G0019329.1 mouse_genomes_project 11 114649989 114650838 + protein_coding processed_transcript MGP_BALBcJ_T0028304.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26723175 26730161 + MGP_BALBcJ_P0028304 Mtif2 protein_coding protein_coding MGP_BALBcJ_T0028305.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26723203 26730680 + MGP_BALBcJ_P0028305 Mtif2 protein_coding protein_coding MGP_BALBcJ_T0028306.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26723214 26726993 + Mtif2 protein_coding processed_transcript MGP_BALBcJ_T0028307.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26723215 26742259 + MGP_BALBcJ_P0028307 Mtif2 protein_coding protein_coding MGP_BALBcJ_T0028308.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26723217 26736930 + MGP_BALBcJ_P0028308 Mtif2 protein_coding protein_coding MGP_BALBcJ_T0028309.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26723224 26741988 + MGP_BALBcJ_P0028309 Mtif2 protein_coding protein_coding MGP_BALBcJ_T0028310.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26730053 26737037 + MGP_BALBcJ_P0028310 Mtif2 protein_coding protein_coding MGP_BALBcJ_T0028311.1 MGP_BALBcJ_G0018048.1 mouse_genomes_project 11 26736735 26738786 + Mtif2 protein_coding processed_transcript MGP_BALBcJ_T0098822.1 MGP_BALBcJ_G0036875.1 mouse_genomes_project 11 86287506 86291442 + 1110028F11Rik sense_intronic sense_intronic MGP_BALBcJ_T0098823.1 MGP_BALBcJ_G0036875.1 mouse_genomes_project 11 86288233 86291100 + 1110028F11Rik sense_intronic sense_intronic MGP_BALBcJ_T0032963.1 MGP_BALBcJ_G0019234.1 mouse_genomes_project 11 105088941 105098066 + MGP_BALBcJ_P0032963 Taco1 protein_coding protein_coding MGP_BALBcJ_T0034030.1 MGP_BALBcJ_G0019452.1 mouse_genomes_project 11 119814396 119815550 - MGP_BALBcJ_P0034030 Ppp1r27 protein_coding protein_coding MGP_BALBcJ_T0029146.1 MGP_BALBcJ_G0018274.1 mouse_genomes_project 11 53851692 53867953 - MGP_BALBcJ_P0029146 Nmur2 protein_coding protein_coding MGP_BALBcJ_T0029036.1 MGP_BALBcJ_G0018247.1 mouse_genomes_project 11 51640996 51665247 - MGP_BALBcJ_P0029036 Slc22a5 protein_coding protein_coding MGP_BALBcJ_T0029238.1 MGP_BALBcJ_G0018315.1 mouse_genomes_project 11 56660460 56669525 - MGP_BALBcJ_P0029238 Fam183b protein_coding protein_coding MGP_BALBcJ_T0029239.1 MGP_BALBcJ_G0018315.1 mouse_genomes_project 11 56660474 56669525 - MGP_BALBcJ_P0029239 Fam183b protein_coding protein_coding MGP_BALBcJ_T0032509.1 MGP_BALBcJ_G0019146.1 mouse_genomes_project 11 100433032 100440518 - MGP_BALBcJ_P0032509 Vat1 protein_coding protein_coding MGP_BALBcJ_T0006158.1 MGP_BALBcJ_G0005145.1 mouse_genomes_project 11 19540988 19548217 + Gm12051 lincRNA lincRNA MGP_BALBcJ_T0100487.1 MGP_BALBcJ_G0038523.1 mouse_genomes_project 11 8423862 8423990 - Gm26458 snoRNA snoRNA MGP_BALBcJ_T0032865.1 MGP_BALBcJ_G0019213.1 mouse_genomes_project 11 102970706 102989919 + MGP_BALBcJ_P0032865 Arf2 protein_coding protein_coding MGP_BALBcJ_T0032866.1 MGP_BALBcJ_G0019213.1 mouse_genomes_project 11 102970838 102989919 + MGP_BALBcJ_P0032866 Arf2 protein_coding protein_coding MGP_BALBcJ_T0032867.1 MGP_BALBcJ_G0019213.1 mouse_genomes_project 11 102977327 102986480 + Arf2 protein_coding retained_intron MGP_BALBcJ_T0032868.1 MGP_BALBcJ_G0019213.1 mouse_genomes_project 11 102984170 102988209 + MGP_BALBcJ_P0032868 Arf2 protein_coding protein_coding MGP_BALBcJ_T0031038.1 MGP_BALBcJ_G0018739.1 mouse_genomes_project 11 77928935 77937729 - MGP_BALBcJ_P0031038 protein_coding protein_coding MGP_BALBcJ_T0029285.1 MGP_BALBcJ_G0018332.1 mouse_genomes_project 11 57123959 57126378 + MGP_BALBcJ_P0029285 2310033P09Rik protein_coding protein_coding MGP_BALBcJ_T0009746.1 MGP_BALBcJ_G0007871.1 mouse_genomes_project 11 118410654 118410716 - Mir6934 miRNA miRNA MGP_BALBcJ_T0033984.1 MGP_BALBcJ_G0019442.1 mouse_genomes_project 11 119705032 119709343 + MGP_BALBcJ_P0033984 Tspan10 protein_coding protein_coding MGP_BALBcJ_T0033985.1 MGP_BALBcJ_G0019442.1 mouse_genomes_project 11 119705059 119706694 + Tspan10 protein_coding processed_transcript MGP_BALBcJ_T0033846.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118486229 118489359 + Ccdc40 protein_coding processed_transcript MGP_BALBcJ_T0033847.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118486235 118489275 + Ccdc40 protein_coding processed_transcript MGP_BALBcJ_T0033848.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118486759 118521388 + MGP_BALBcJ_P0033848 Ccdc40 protein_coding protein_coding MGP_BALBcJ_T0033849.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118486764 118522935 + MGP_BALBcJ_P0033849 Ccdc40 protein_coding protein_coding MGP_BALBcJ_T0033850.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118496352 118509407 + Ccdc40 protein_coding retained_intron MGP_BALBcJ_T0033851.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118511468 118522857 + Ccdc40 protein_coding retained_intron MGP_BALBcJ_T0033852.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118517416 118523656 + Ccdc40 protein_coding processed_transcript MGP_BALBcJ_T0033853.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118518256 118521608 + Ccdc40 protein_coding retained_intron MGP_BALBcJ_T0033854.1 MGP_BALBcJ_G0019419.1 mouse_genomes_project 11 118521359 118522727 + Ccdc40 protein_coding retained_intron MGP_BALBcJ_T0034184.1 MGP_BALBcJ_G0019481.1 mouse_genomes_project 11 120435948 120438125 + MGP_BALBcJ_P0034184 Tex19.1 protein_coding protein_coding MGP_BALBcJ_T0034185.1 MGP_BALBcJ_G0019481.1 mouse_genomes_project 11 120435962 120436673 + MGP_BALBcJ_P0034185 Tex19.1 protein_coding protein_coding MGP_BALBcJ_T0100535.1 MGP_BALBcJ_G0038571.1 mouse_genomes_project 11 81888308 81888440 - Gm23951 snoRNA snoRNA MGP_BALBcJ_T0003121.1 MGP_BALBcJ_G0002897.1 mouse_genomes_project 11 27321354 27323082 + Gm29237 antisense antisense MGP_BALBcJ_T0033602.1 MGP_BALBcJ_G0019367.1 mouse_genomes_project 11 115583330 115588021 - MGP_BALBcJ_P0033602 Foxj1 protein_coding protein_coding MGP_BALBcJ_T0011270.1 MGP_BALBcJ_G0009395.1 mouse_genomes_project 11 536875 537111 - Gm27517 misc_RNA misc_RNA MGP_BALBcJ_T0100538.1 MGP_BALBcJ_G0038574.1 mouse_genomes_project 11 94795089 94795304 + Gm24949 snoRNA snoRNA MGP_BALBcJ_T0006322.1 MGP_BALBcJ_G0005274.1 mouse_genomes_project 11 111243536 111268867 + Gm11680 lincRNA lincRNA MGP_BALBcJ_T0032967.1 MGP_BALBcJ_G0019236.1 mouse_genomes_project 11 105183203 105187074 - MGP_BALBcJ_P0032967 Limd2 protein_coding protein_coding MGP_BALBcJ_T0032968.1 MGP_BALBcJ_G0019236.1 mouse_genomes_project 11 105185261 105186357 - Limd2 protein_coding processed_transcript MGP_BALBcJ_T0032969.1 MGP_BALBcJ_G0019236.1 mouse_genomes_project 11 105185378 105186875 - MGP_BALBcJ_P0032969 Limd2 protein_coding protein_coding MGP_BALBcJ_T0032970.1 MGP_BALBcJ_G0019236.1 mouse_genomes_project 11 105185598 105187734 - MGP_BALBcJ_P0032970 Limd2 protein_coding protein_coding MGP_BALBcJ_T0033843.1 MGP_BALBcJ_G0019418.1 mouse_genomes_project 11 118399188 118486098 - MGP_BALBcJ_P0033843 Tbc1d16 protein_coding unknown_likely_coding MGP_BALBcJ_T0033844.1 MGP_BALBcJ_G0019418.1 mouse_genomes_project 11 118399196 118486130 - MGP_BALBcJ_P0033844 Tbc1d16 protein_coding protein_coding MGP_BALBcJ_T0033845.1 MGP_BALBcJ_G0019418.1 mouse_genomes_project 11 118467994 118479712 - MGP_BALBcJ_P0033845 Tbc1d16 protein_coding protein_coding MGP_BALBcJ_T0030255.1 MGP_BALBcJ_G0018547.1 mouse_genomes_project 11 68807939 68810802 - MGP_BALBcJ_P0030255 Slc25a11 protein_coding protein_coding MGP_BALBcJ_T0030256.1 MGP_BALBcJ_G0018547.1 mouse_genomes_project 11 68808438 68809654 - Slc25a11 protein_coding retained_intron MGP_BALBcJ_T0030257.1 MGP_BALBcJ_G0018547.1 mouse_genomes_project 11 68808974 68811223 - MGP_BALBcJ_P0030257 Slc25a11 protein_coding protein_coding MGP_BALBcJ_T0030258.1 MGP_BALBcJ_G0018547.1 mouse_genomes_project 11 68809652 68810722 - Slc25a11 protein_coding retained_intron MGP_BALBcJ_T0030259.1 MGP_BALBcJ_G0018547.1 mouse_genomes_project 11 68809658 68810643 - MGP_BALBcJ_P0030259 Slc25a11 protein_coding protein_coding MGP_BALBcJ_T0017113.1 MGP_BALBcJ_G0015088.1 mouse_genomes_project 11 3515322 3518279 - Snhg15 processed_transcript processed_transcript MGP_BALBcJ_T0017114.1 MGP_BALBcJ_G0015088.1 mouse_genomes_project 11 3515323 3516462 - Snhg15 processed_transcript processed_transcript MGP_BALBcJ_T0017115.1 MGP_BALBcJ_G0015088.1 mouse_genomes_project 11 3515356 3517960 - Snhg15 processed_transcript processed_transcript MGP_BALBcJ_T0017116.1 MGP_BALBcJ_G0015088.1 mouse_genomes_project 11 3517417 3518265 - Snhg15 processed_transcript processed_transcript MGP_BALBcJ_T0012570.1 MGP_BALBcJ_G0010667.1 mouse_genomes_project 11 48555584 48558911 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031731.1 MGP_BALBcJ_G0018916.1 mouse_genomes_project 11 93757374 93772492 - MGP_BALBcJ_P0031731 Pdk2 protein_coding protein_coding MGP_BALBcJ_T0031732.1 MGP_BALBcJ_G0018916.1 mouse_genomes_project 11 93758070 93759693 - Pdk2 protein_coding processed_transcript MGP_BALBcJ_T0031733.1 MGP_BALBcJ_G0018916.1 mouse_genomes_project 11 93759844 93760541 - Pdk2 protein_coding processed_transcript MGP_BALBcJ_T0031734.1 MGP_BALBcJ_G0018916.1 mouse_genomes_project 11 93760770 93771696 - Pdk2 protein_coding processed_transcript MGP_BALBcJ_T0031735.1 MGP_BALBcJ_G0018916.1 mouse_genomes_project 11 93763035 93772013 - Pdk2 protein_coding processed_transcript MGP_BALBcJ_T0006210.1 MGP_BALBcJ_G0005190.1 mouse_genomes_project 11 48819542 48850490 - lincRNA lincRNA MGP_BALBcJ_T0006211.1 MGP_BALBcJ_G0005190.1 mouse_genomes_project 11 48819960 48849598 - lincRNA lincRNA MGP_BALBcJ_T0029982.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67798853 67808221 - MGP_BALBcJ_P0029982 Senp3 protein_coding protein_coding MGP_BALBcJ_T0029983.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67798854 67801209 - Senp3 protein_coding retained_intron MGP_BALBcJ_T0029984.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67798859 67808459 - MGP_BALBcJ_P0029984 Senp3 protein_coding protein_coding MGP_BALBcJ_T0029985.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67799507 67804710 - Senp3 protein_coding retained_intron MGP_BALBcJ_T0029986.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67799573 67805278 - MGP_BALBcJ_P0029986 Senp3 protein_coding protein_coding MGP_BALBcJ_T0029987.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67800185 67800676 - Senp3 protein_coding retained_intron MGP_BALBcJ_T0029988.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67800465 67803180 - Senp3 protein_coding processed_transcript MGP_BALBcJ_T0029989.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67803280 67804604 - Senp3 protein_coding retained_intron MGP_BALBcJ_T0029990.1 MGP_BALBcJ_G0018487.1 mouse_genomes_project 11 67804747 67805786 - Senp3 protein_coding retained_intron MGP_BALBcJ_T0017169.1 MGP_BALBcJ_G0015118.1 mouse_genomes_project 11 70402646 70405959 + 4930563E22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017170.1 MGP_BALBcJ_G0015118.1 mouse_genomes_project 11 70402680 70405953 + 4930563E22Rik processed_transcript processed_transcript MGP_BALBcJ_T0032568.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100966459 100982324 - MGP_BALBcJ_P0032568 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0032569.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100966459 100982324 - MGP_BALBcJ_P0032569 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0032570.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100966459 100980112 - MGP_BALBcJ_P0032570 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0032571.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100966459 100978815 - MGP_BALBcJ_P0032571 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0032572.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100968772 100976986 - MGP_BALBcJ_P0032572 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0032573.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100970019 100980091 - MGP_BALBcJ_P0032573 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0032574.1 MGP_BALBcJ_G0019157.1 mouse_genomes_project 11 100975891 100980064 - MGP_BALBcJ_P0032574 Dusp3 protein_coding protein_coding MGP_BALBcJ_T0009694.1 MGP_BALBcJ_G0007819.1 mouse_genomes_project 11 76425603 76425675 - Mir451b miRNA miRNA MGP_BALBcJ_T0012546.1 MGP_BALBcJ_G0010643.1 mouse_genomes_project 11 37939079 37940288 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012619.1 MGP_BALBcJ_G0010716.1 mouse_genomes_project 11 61267189 61267422 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028984.1 MGP_BALBcJ_G0018234.1 mouse_genomes_project 11 51216034 51226581 + MGP_BALBcJ_P0028984 Shroom1 protein_coding protein_coding MGP_BALBcJ_T0028985.1 MGP_BALBcJ_G0018234.1 mouse_genomes_project 11 51216059 51226113 + MGP_BALBcJ_P0028985 Shroom1 protein_coding protein_coding MGP_BALBcJ_T0028986.1 MGP_BALBcJ_G0018234.1 mouse_genomes_project 11 51216075 51226570 + Shroom1 protein_coding retained_intron MGP_BALBcJ_T0028987.1 MGP_BALBcJ_G0018234.1 mouse_genomes_project 11 51216078 51226316 + Shroom1 protein_coding retained_intron MGP_BALBcJ_T0028988.1 MGP_BALBcJ_G0018234.1 mouse_genomes_project 11 51216108 51226117 + MGP_BALBcJ_P0028988 Shroom1 protein_coding protein_coding MGP_BALBcJ_T0028989.1 MGP_BALBcJ_G0018234.1 mouse_genomes_project 11 51224310 51224668 + Shroom1 protein_coding processed_transcript MGP_BALBcJ_T0032723.1 MGP_BALBcJ_G0019180.1 mouse_genomes_project 11 101490406 101571467 - MGP_BALBcJ_P0032723 Gpatch8 protein_coding protein_coding MGP_BALBcJ_T0032724.1 MGP_BALBcJ_G0019180.1 mouse_genomes_project 11 101491697 101522900 - Gpatch8 protein_coding processed_transcript MGP_BALBcJ_T0032725.1 MGP_BALBcJ_G0019180.1 mouse_genomes_project 11 101521946 101571467 - Gpatch8 protein_coding processed_transcript MGP_BALBcJ_T0032726.1 MGP_BALBcJ_G0019180.1 mouse_genomes_project 11 101522625 101571467 - Gpatch8 protein_coding processed_transcript MGP_BALBcJ_T0032727.1 MGP_BALBcJ_G0019180.1 mouse_genomes_project 11 101551535 101571444 - Gpatch8 protein_coding processed_transcript MGP_BALBcJ_T0032728.1 MGP_BALBcJ_G0019180.1 mouse_genomes_project 11 101552425 101571660 - Gpatch8 protein_coding processed_transcript MGP_BALBcJ_T0030552.1 MGP_BALBcJ_G0018630.1 mouse_genomes_project 11 72523384 72528851 + MGP_BALBcJ_P0030552 Olfr59 protein_coding protein_coding MGP_BALBcJ_T0030553.1 MGP_BALBcJ_G0018630.1 mouse_genomes_project 11 72523442 72528687 + MGP_BALBcJ_P0030553 Olfr59 protein_coding protein_coding MGP_BALBcJ_T0030554.1 MGP_BALBcJ_G0018630.1 mouse_genomes_project 11 72523457 72529137 + MGP_BALBcJ_P0030554 Olfr59 protein_coding protein_coding MGP_BALBcJ_T0030555.1 MGP_BALBcJ_G0018630.1 mouse_genomes_project 11 72523481 72528686 + MGP_BALBcJ_P0030555 Olfr59 protein_coding protein_coding MGP_BALBcJ_T0029918.1 MGP_BALBcJ_G0018472.1 mouse_genomes_project 11 67516019 67516857 + Naa38 protein_coding processed_transcript MGP_BALBcJ_T0029919.1 MGP_BALBcJ_G0018472.1 mouse_genomes_project 11 67516179 67517212 + MGP_BALBcJ_P0029919 Naa38 protein_coding protein_coding MGP_BALBcJ_T0029920.1 MGP_BALBcJ_G0018472.1 mouse_genomes_project 11 67516346 67517212 + Naa38 protein_coding processed_transcript MGP_BALBcJ_T0029921.1 MGP_BALBcJ_G0018472.1 mouse_genomes_project 11 67516650 67517212 + Naa38 protein_coding processed_transcript MGP_BALBcJ_T0031989.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96627099 96634915 + MGP_BALBcJ_P0031989 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031990.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96627275 96666814 + MGP_BALBcJ_P0031990 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031991.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96627771 96635395 + Lasp1 protein_coding retained_intron MGP_BALBcJ_T0031992.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96627937 96661649 + MGP_BALBcJ_P0031992 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031993.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96628097 96661637 + MGP_BALBcJ_P0031993 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031994.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96628270 96661605 + MGP_BALBcJ_P0031994 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031995.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96628396 96652911 + MGP_BALBcJ_P0031995 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031996.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96628402 96634995 + MGP_BALBcJ_P0031996 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031997.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96630094 96652913 + MGP_BALBcJ_P0031997 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031998.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96633267 96664168 + MGP_BALBcJ_P0031998 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0031999.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96634385 96634976 + MGP_BALBcJ_P0031999 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0032000.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96634577 96643868 + MGP_BALBcJ_P0032000 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0032001.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96643333 96652952 + MGP_BALBcJ_P0032001 Lasp1 protein_coding protein_coding MGP_BALBcJ_T0032002.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96661234 96664254 + Lasp1 protein_coding retained_intron MGP_BALBcJ_T0032003.1 MGP_BALBcJ_G0018983.1 mouse_genomes_project 11 96661461 96662429 + Lasp1 protein_coding retained_intron MGP_BALBcJ_T0032133.1 MGP_BALBcJ_G0019016.1 mouse_genomes_project 11 97663002 97687472 + MGP_BALBcJ_P0032133 Casc3 protein_coding protein_coding MGP_BALBcJ_T0032134.1 MGP_BALBcJ_G0019016.1 mouse_genomes_project 11 97663172 97687464 + MGP_BALBcJ_P0032134 Casc3 protein_coding protein_coding MGP_BALBcJ_T0032135.1 MGP_BALBcJ_G0019016.1 mouse_genomes_project 11 97663514 97664293 + Casc3 protein_coding processed_transcript MGP_BALBcJ_T0032136.1 MGP_BALBcJ_G0019016.1 mouse_genomes_project 11 97663525 97675810 + Casc3 protein_coding processed_transcript MGP_BALBcJ_T0029955.1 MGP_BALBcJ_G0018483.1 mouse_genomes_project 11 67781050 67782464 + MGP_BALBcJ_P0029955 Sox15 protein_coding protein_coding MGP_BALBcJ_T0030863.1 MGP_BALBcJ_G0018697.1 mouse_genomes_project 11 76229898 76243219 - MGP_BALBcJ_P0030863 Pipox protein_coding protein_coding MGP_BALBcJ_T0030864.1 MGP_BALBcJ_G0018697.1 mouse_genomes_project 11 76230343 76231970 - Pipox protein_coding retained_intron MGP_BALBcJ_T0030865.1 MGP_BALBcJ_G0018697.1 mouse_genomes_project 11 76231902 76233828 - Pipox protein_coding processed_transcript MGP_BALBcJ_T0006197.1 MGP_BALBcJ_G0005178.1 mouse_genomes_project 11 40707664 40709374 + Gm12148 lincRNA lincRNA MGP_BALBcJ_T0029211.1 MGP_BALBcJ_G0018298.1 mouse_genomes_project 11 56336985 56338277 - MGP_BALBcJ_P0029211 Olfr331 protein_coding protein_coding MGP_BALBcJ_T0029212.1 MGP_BALBcJ_G0018298.1 mouse_genomes_project 11 56336985 56341357 - MGP_BALBcJ_P0029212 Olfr331 protein_coding protein_coding MGP_BALBcJ_T0028152.1 MGP_BALBcJ_G0018015.1 mouse_genomes_project 11 18633195 18721471 + MGP_BALBcJ_P0028152 Wdpcp protein_coding protein_coding MGP_BALBcJ_T0028153.1 MGP_BALBcJ_G0018015.1 mouse_genomes_project 11 18633195 18955445 + MGP_BALBcJ_P0028153 Wdpcp protein_coding protein_coding MGP_BALBcJ_T0028154.1 MGP_BALBcJ_G0018015.1 mouse_genomes_project 11 18633265 18754719 + Wdpcp protein_coding processed_transcript MGP_BALBcJ_T0028155.1 MGP_BALBcJ_G0018015.1 mouse_genomes_project 11 18746731 18768923 + Wdpcp protein_coding processed_transcript MGP_BALBcJ_T0028156.1 MGP_BALBcJ_G0018015.1 mouse_genomes_project 11 18752279 18807418 + Wdpcp protein_coding processed_transcript MGP_BALBcJ_T0028157.1 MGP_BALBcJ_G0018015.1 mouse_genomes_project 11 18869227 18873203 + Wdpcp protein_coding processed_transcript MGP_BALBcJ_T0031133.1 MGP_BALBcJ_G0018766.1 mouse_genomes_project 11 80610253 80739860 - Ccl1 protein_coding processed_transcript MGP_BALBcJ_T0031134.1 MGP_BALBcJ_G0018766.1 mouse_genomes_project 11 80610253 80613395 - MGP_BALBcJ_P0031134 Ccl1 protein_coding protein_coding MGP_BALBcJ_T0031135.1 MGP_BALBcJ_G0018766.1 mouse_genomes_project 11 80610255 80613395 - MGP_BALBcJ_P0031135 Ccl1 protein_coding protein_coding MGP_BALBcJ_T0011280.1 MGP_BALBcJ_G0009405.1 mouse_genomes_project 11 58029673 58029800 + Gm27511 misc_RNA misc_RNA MGP_BALBcJ_T0003116.1 MGP_BALBcJ_G0002893.1 mouse_genomes_project 11 21181469 21197676 - Gm12064 antisense antisense MGP_BALBcJ_T0012657.1 MGP_BALBcJ_G0010754.1 mouse_genomes_project 11 75980760 75981527 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030917.1 MGP_BALBcJ_G0018707.1 mouse_genomes_project 11 76548936 76551082 - Rpl23a protein_coding retained_intron MGP_BALBcJ_T0030918.1 MGP_BALBcJ_G0018707.1 mouse_genomes_project 11 76548939 76549635 - Rpl23a protein_coding retained_intron MGP_BALBcJ_T0030919.1 MGP_BALBcJ_G0018707.1 mouse_genomes_project 11 76548939 76551589 - MGP_BALBcJ_P0030919 Rpl23a protein_coding protein_coding MGP_BALBcJ_T0031142.1 MGP_BALBcJ_G0018769.1 mouse_genomes_project 11 81210605 81212196 + MGP_BALBcJ_P0031142 Zfp830 protein_coding protein_coding MGP_BALBcJ_T0028218.1 MGP_BALBcJ_G0018029.1 mouse_genomes_project 11 20589278 20593436 - MGP_BALBcJ_P0028218 1700093K21Rik protein_coding protein_coding MGP_BALBcJ_T0028219.1 MGP_BALBcJ_G0018029.1 mouse_genomes_project 11 20589278 20592716 - MGP_BALBcJ_P0028219 1700093K21Rik protein_coding protein_coding MGP_BALBcJ_T0028220.1 MGP_BALBcJ_G0018029.1 mouse_genomes_project 11 20592280 20593436 - MGP_BALBcJ_P0028220 1700093K21Rik protein_coding protein_coding MGP_BALBcJ_T0028221.1 MGP_BALBcJ_G0018029.1 mouse_genomes_project 11 20592309 20594652 - MGP_BALBcJ_P0028221 1700093K21Rik protein_coding protein_coding MGP_BALBcJ_T0012674.1 MGP_BALBcJ_G0010771.1 mouse_genomes_project 11 81428913 81429743 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100526.1 MGP_BALBcJ_G0038562.1 mouse_genomes_project 11 75374519 75374640 + Gm22772 snoRNA snoRNA MGP_BALBcJ_T0100551.1 MGP_BALBcJ_G0038587.1 mouse_genomes_project 11 115926074 115926148 + Snord1a snoRNA snoRNA MGP_BALBcJ_T0033329.1 MGP_BALBcJ_G0019318.1 mouse_genomes_project 11 114406135 114465894 + MGP_BALBcJ_P0033329 Tmem104 protein_coding protein_coding MGP_BALBcJ_T0033330.1 MGP_BALBcJ_G0019318.1 mouse_genomes_project 11 114406135 114465894 + MGP_BALBcJ_P0033330 Tmem104 protein_coding protein_coding MGP_BALBcJ_T0033331.1 MGP_BALBcJ_G0019318.1 mouse_genomes_project 11 114406159 114414866 + Tmem104 protein_coding processed_transcript MGP_BALBcJ_T0033332.1 MGP_BALBcJ_G0019318.1 mouse_genomes_project 11 114406199 114464636 + Tmem104 protein_coding processed_transcript MGP_BALBcJ_T0030084.1 MGP_BALBcJ_G0018512.1 mouse_genomes_project 11 68118462 68120608 + MGP_BALBcJ_P0030084 Cldn7 protein_coding protein_coding MGP_BALBcJ_T0030085.1 MGP_BALBcJ_G0018512.1 mouse_genomes_project 11 68119136 68121528 + MGP_BALBcJ_P0030085 Cldn7 protein_coding protein_coding MGP_BALBcJ_T0030086.1 MGP_BALBcJ_G0018512.1 mouse_genomes_project 11 68120556 68121291 + MGP_BALBcJ_P0030086 Cldn7 protein_coding protein_coding MGP_BALBcJ_T0032164.1 MGP_BALBcJ_G0019023.1 mouse_genomes_project 11 97897806 97911223 + MGP_BALBcJ_P0032164 Igfbp4 protein_coding protein_coding MGP_BALBcJ_T0032165.1 MGP_BALBcJ_G0019023.1 mouse_genomes_project 11 97898322 97908555 + MGP_BALBcJ_P0032165 Igfbp4 protein_coding protein_coding MGP_BALBcJ_T0032166.1 MGP_BALBcJ_G0019023.1 mouse_genomes_project 11 97898748 97905214 + Igfbp4 protein_coding processed_transcript MGP_BALBcJ_T0032167.1 MGP_BALBcJ_G0019023.1 mouse_genomes_project 11 97900450 97908774 + Igfbp4 protein_coding processed_transcript MGP_BALBcJ_T0032168.1 MGP_BALBcJ_G0019023.1 mouse_genomes_project 11 97901619 97908669 + Igfbp4 protein_coding processed_transcript MGP_BALBcJ_T0032169.1 MGP_BALBcJ_G0019023.1 mouse_genomes_project 11 97904164 97908666 + MGP_BALBcJ_P0032169 Igfbp4 protein_coding protein_coding MGP_BALBcJ_T0003137.1 MGP_BALBcJ_G0002913.1 mouse_genomes_project 11 48290388 48295851 - Gm12200 antisense antisense MGP_BALBcJ_T0028624.1 MGP_BALBcJ_G0018130.1 mouse_genomes_project 11 43478817 43497235 - MGP_BALBcJ_P0028624 Nipal4 protein_coding protein_coding MGP_BALBcJ_T0009729.1 MGP_BALBcJ_G0007854.1 mouse_genomes_project 11 101676598 101676707 - Gm22920 miRNA miRNA MGP_BALBcJ_T0028945.1 MGP_BALBcJ_G0018222.1 mouse_genomes_project 11 49935544 49948695 + MGP_BALBcJ_P0028945 Skp1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028946.1 MGP_BALBcJ_G0018222.1 mouse_genomes_project 11 49935558 49950460 + MGP_BALBcJ_P0028946 Skp1a protein_coding protein_coding MGP_BALBcJ_T0028947.1 MGP_BALBcJ_G0018222.1 mouse_genomes_project 11 49935586 49941971 + Skp1a protein_coding retained_intron MGP_BALBcJ_T0028948.1 MGP_BALBcJ_G0018222.1 mouse_genomes_project 11 49935586 49948698 + MGP_BALBcJ_P0028948 Skp1a protein_coding protein_coding MGP_BALBcJ_T0028949.1 MGP_BALBcJ_G0018222.1 mouse_genomes_project 11 49935738 49950460 + MGP_BALBcJ_P0028949 Skp1a protein_coding protein_coding MGP_BALBcJ_T0028950.1 MGP_BALBcJ_G0018222.1 mouse_genomes_project 11 49940410 49949653 + MGP_BALBcJ_P0028950 Skp1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033284.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114050289 114062366 + MGP_BALBcJ_P0033284 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0033285.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114050677 114067728 + MGP_BALBcJ_P0033285 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0033286.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114050943 114068986 + MGP_BALBcJ_P0033286 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0033287.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114050987 114067729 + MGP_BALBcJ_P0033287 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0033288.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114051017 114062980 + MGP_BALBcJ_P0033288 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0033289.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114051456 114062530 + MGP_BALBcJ_P0033289 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0033290.1 MGP_BALBcJ_G0019304.1 mouse_genomes_project 11 114063124 114069240 + MGP_BALBcJ_P0033290 Gprc5c protein_coding protein_coding MGP_BALBcJ_T0028242.1 MGP_BALBcJ_G0018035.1 mouse_genomes_project 11 21129347 21156398 - MGP_BALBcJ_P0028242 A830031A19Rik protein_coding protein_coding MGP_BALBcJ_T0098820.1 MGP_BALBcJ_G0036873.1 mouse_genomes_project 11 69030639 69038748 + Gm19967 sense_intronic sense_intronic MGP_BALBcJ_T0030401.1 MGP_BALBcJ_G0018574.1 mouse_genomes_project 11 70429897 70454161 - MGP_BALBcJ_P0030401 Slc13a5 protein_coding protein_coding MGP_BALBcJ_T0030402.1 MGP_BALBcJ_G0018574.1 mouse_genomes_project 11 70447890 70454161 - MGP_BALBcJ_P0030402 Slc13a5 protein_coding protein_coding MGP_BALBcJ_T0030403.1 MGP_BALBcJ_G0018574.1 mouse_genomes_project 11 70449195 70454781 - MGP_BALBcJ_P0030403 Slc13a5 protein_coding protein_coding MGP_BALBcJ_T0003181.1 MGP_BALBcJ_G0002951.1 mouse_genomes_project 11 60778488 60789410 + antisense antisense MGP_BALBcJ_T0028619.1 MGP_BALBcJ_G0018128.1 mouse_genomes_project 11 43313061 43345597 + MGP_BALBcJ_P0028619 Sox30 protein_coding protein_coding MGP_BALBcJ_T0031684.1 MGP_BALBcJ_G0018901.1 mouse_genomes_project 11 93222612 93232102 - Rsad1 protein_coding processed_transcript MGP_BALBcJ_T0031685.1 MGP_BALBcJ_G0018901.1 mouse_genomes_project 11 93222612 93232046 - MGP_BALBcJ_P0031685 Rsad1 protein_coding protein_coding MGP_BALBcJ_T0031686.1 MGP_BALBcJ_G0018901.1 mouse_genomes_project 11 93227417 93231639 - Rsad1 protein_coding processed_transcript MGP_BALBcJ_T0031687.1 MGP_BALBcJ_G0018901.1 mouse_genomes_project 11 93227482 93231449 - Rsad1 protein_coding processed_transcript MGP_BALBcJ_T0031984.1 MGP_BALBcJ_G0018982.1 mouse_genomes_project 11 96602235 96610641 - MGP_BALBcJ_P0031984 Rpl23 protein_coding protein_coding MGP_BALBcJ_T0031985.1 MGP_BALBcJ_G0018982.1 mouse_genomes_project 11 96602746 96610480 - Rpl23 protein_coding processed_transcript MGP_BALBcJ_T0031986.1 MGP_BALBcJ_G0018982.1 mouse_genomes_project 11 96602764 96605723 - Rpl23 protein_coding processed_transcript MGP_BALBcJ_T0031987.1 MGP_BALBcJ_G0018982.1 mouse_genomes_project 11 96608407 96610566 - Rpl23 protein_coding processed_transcript MGP_BALBcJ_T0031988.1 MGP_BALBcJ_G0018982.1 mouse_genomes_project 11 96608449 96610586 - MGP_BALBcJ_P0031988 Rpl23 protein_coding protein_coding MGP_BALBcJ_T0006169.1 MGP_BALBcJ_G0005156.1 mouse_genomes_project 11 21808742 21818461 - Gm10466 lincRNA lincRNA MGP_BALBcJ_T0029648.1 MGP_BALBcJ_G0018406.1 mouse_genomes_project 11 60976761 61013720 + MGP_BALBcJ_P0029648 Cdrt4 protein_coding protein_coding MGP_BALBcJ_T0032063.1 MGP_BALBcJ_G0018999.1 mouse_genomes_project 11 97227514 97230905 - Pgap3 protein_coding processed_transcript MGP_BALBcJ_T0032064.1 MGP_BALBcJ_G0018999.1 mouse_genomes_project 11 97227514 97240484 - MGP_BALBcJ_P0032064 Pgap3 protein_coding protein_coding MGP_BALBcJ_T0032065.1 MGP_BALBcJ_G0018999.1 mouse_genomes_project 11 97228461 97240429 - MGP_BALBcJ_P0032065 Pgap3 protein_coding protein_coding MGP_BALBcJ_T0032066.1 MGP_BALBcJ_G0018999.1 mouse_genomes_project 11 97230154 97240408 - Pgap3 protein_coding processed_transcript MGP_BALBcJ_T0032067.1 MGP_BALBcJ_G0018999.1 mouse_genomes_project 11 97238556 97240431 - Pgap3 protein_coding processed_transcript MGP_BALBcJ_T0012454.1 MGP_BALBcJ_G0010551.1 mouse_genomes_project 11 6109839 6110659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031249.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82497838 82580893 + MGP_BALBcJ_P0031249 Synrg protein_coding protein_coding MGP_BALBcJ_T0031250.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82497838 82576762 + MGP_BALBcJ_P0031250 Synrg protein_coding protein_coding MGP_BALBcJ_T0031251.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82497886 82576736 + MGP_BALBcJ_P0031251 Synrg protein_coding protein_coding MGP_BALBcJ_T0031252.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82497886 82576736 + MGP_BALBcJ_P0031252 Synrg protein_coding protein_coding MGP_BALBcJ_T0031253.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82516014 82524711 + Synrg protein_coding processed_transcript MGP_BALBcJ_T0031254.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82516858 82525771 + MGP_BALBcJ_P0031254 Synrg protein_coding protein_coding MGP_BALBcJ_T0031255.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82524710 82526187 + Synrg protein_coding retained_intron MGP_BALBcJ_T0031256.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82554809 82577219 + Synrg protein_coding retained_intron MGP_BALBcJ_T0031257.1 MGP_BALBcJ_G0018804.1 mouse_genomes_project 11 82562462 82575818 + Synrg protein_coding retained_intron MGP_BALBcJ_T0032598.1 MGP_BALBcJ_G0019163.1 mouse_genomes_project 11 101103164 101104311 - MGP_BALBcJ_P0032598 Pyy protein_coding protein_coding MGP_BALBcJ_T0032599.1 MGP_BALBcJ_G0019163.1 mouse_genomes_project 11 101103164 101104321 - MGP_BALBcJ_P0032599 Pyy protein_coding protein_coding MGP_BALBcJ_T0032600.1 MGP_BALBcJ_G0019163.1 mouse_genomes_project 11 101103168 101103905 - MGP_BALBcJ_P0032600 Pyy protein_coding protein_coding MGP_BALBcJ_T0032601.1 MGP_BALBcJ_G0019163.1 mouse_genomes_project 11 101103449 101104321 - Pyy protein_coding retained_intron MGP_BALBcJ_T0003128.1 MGP_BALBcJ_G0002904.1 mouse_genomes_project 11 40553976 40556679 - Gm12144 antisense antisense MGP_BALBcJ_T0031787.1 MGP_BALBcJ_G0018931.1 mouse_genomes_project 11 94579534 94592404 - MGP_BALBcJ_P0031787 Abi3 protein_coding protein_coding MGP_BALBcJ_T0031789.1 MGP_BALBcJ_G0018931.1 mouse_genomes_project 11 94581922 94592471 - Abi3 protein_coding processed_transcript MGP_BALBcJ_T0031790.1 MGP_BALBcJ_G0018931.1 mouse_genomes_project 11 94582702 94585869 - MGP_BALBcJ_P0031790 Abi3 protein_coding protein_coding MGP_BALBcJ_T0031791.1 MGP_BALBcJ_G0018931.1 mouse_genomes_project 11 94587055 94592093 - Abi3 protein_coding processed_transcript MGP_BALBcJ_T0012573.1 MGP_BALBcJ_G0010670.1 mouse_genomes_project 11 50116060 50116223 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030295.1 MGP_BALBcJ_G0018553.1 mouse_genomes_project 11 68852095 68864320 - MGP_BALBcJ_P0030295 Inca1 protein_coding protein_coding MGP_BALBcJ_T0030296.1 MGP_BALBcJ_G0018553.1 mouse_genomes_project 11 68852095 68864320 - MGP_BALBcJ_P0030296 Inca1 protein_coding protein_coding MGP_BALBcJ_T0030297.1 MGP_BALBcJ_G0018553.1 mouse_genomes_project 11 68852095 68864320 - MGP_BALBcJ_P0030297 Inca1 protein_coding protein_coding MGP_BALBcJ_T0030298.1 MGP_BALBcJ_G0018553.1 mouse_genomes_project 11 68852095 68864320 - MGP_BALBcJ_P0030298 Inca1 protein_coding protein_coding MGP_BALBcJ_T0030299.1 MGP_BALBcJ_G0018553.1 mouse_genomes_project 11 68852103 68864274 - MGP_BALBcJ_P0030299 Inca1 protein_coding protein_coding MGP_BALBcJ_T0100508.1 MGP_BALBcJ_G0038544.1 mouse_genomes_project 11 53299338 53299478 + Gm22884 snoRNA snoRNA MGP_BALBcJ_T0028190.1 MGP_BALBcJ_G0018025.1 mouse_genomes_project 11 20068039 20081385 + MGP_BALBcJ_P0028190 Fam161a protein_coding protein_coding MGP_BALBcJ_T0028191.1 MGP_BALBcJ_G0018025.1 mouse_genomes_project 11 20068949 20090758 + MGP_BALBcJ_P0028191 Fam161a protein_coding protein_coding MGP_BALBcJ_T0028192.1 MGP_BALBcJ_G0018025.1 mouse_genomes_project 11 20068973 20084896 + MGP_BALBcJ_P0028192 Fam161a protein_coding protein_coding MGP_BALBcJ_T0028193.1 MGP_BALBcJ_G0018025.1 mouse_genomes_project 11 20073894 20084886 + MGP_BALBcJ_P0028193 Fam161a protein_coding protein_coding MGP_BALBcJ_T0028194.1 MGP_BALBcJ_G0018025.1 mouse_genomes_project 11 20081618 20092047 + MGP_BALBcJ_P0028194 Fam161a protein_coding protein_coding MGP_BALBcJ_T0028195.1 MGP_BALBcJ_G0018025.1 mouse_genomes_project 11 20081704 20084885 + MGP_BALBcJ_P0028195 Fam161a protein_coding protein_coding MGP_BALBcJ_T0028904.1 MGP_BALBcJ_G0018212.1 mouse_genomes_project 11 49274719 49282481 - MGP_BALBcJ_P0028904 N4bp3 protein_coding protein_coding MGP_BALBcJ_T0028905.1 MGP_BALBcJ_G0018212.1 mouse_genomes_project 11 49277210 49282476 - MGP_BALBcJ_P0028905 N4bp3 protein_coding protein_coding MGP_BALBcJ_T0028906.1 MGP_BALBcJ_G0018212.1 mouse_genomes_project 11 49277275 49282459 - MGP_BALBcJ_P0028906 N4bp3 protein_coding protein_coding MGP_BALBcJ_T0003175.1 MGP_BALBcJ_G0002946.1 mouse_genomes_project 11 60564614 60565609 - Gm12279 antisense antisense MGP_BALBcJ_T0006233.1 MGP_BALBcJ_G0005210.1 mouse_genomes_project 11 64995170 65003515 + lincRNA lincRNA MGP_BALBcJ_T0006234.1 MGP_BALBcJ_G0005210.1 mouse_genomes_project 11 64996411 65004018 + lincRNA lincRNA MGP_BALBcJ_T0012520.1 MGP_BALBcJ_G0010617.1 mouse_genomes_project 11 26882017 26883612 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033430.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114842864 114847837 - Mif4gd protein_coding processed_transcript MGP_BALBcJ_T0033431.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114842864 114847877 - Mif4gd protein_coding processed_transcript MGP_BALBcJ_T0033432.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114842864 114847919 - MGP_BALBcJ_P0033432 Mif4gd protein_coding protein_coding MGP_BALBcJ_T0033433.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114842864 114847453 - MGP_BALBcJ_P0033433 Mif4gd protein_coding protein_coding MGP_BALBcJ_T0033434.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114843095 114847828 - MGP_BALBcJ_P0033434 Mif4gd protein_coding protein_coding MGP_BALBcJ_T0033435.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114843153 114847780 - Mif4gd protein_coding processed_transcript MGP_BALBcJ_T0033436.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114843363 114847849 - Mif4gd protein_coding processed_transcript MGP_BALBcJ_T0033437.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114843458 114847076 - MGP_BALBcJ_P0033437 Mif4gd protein_coding protein_coding MGP_BALBcJ_T0033438.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114844123 114847854 - Mif4gd protein_coding processed_transcript MGP_BALBcJ_T0033439.1 MGP_BALBcJ_G0019339.1 mouse_genomes_project 11 114847051 114847870 - Mif4gd protein_coding processed_transcript MGP_BALBcJ_T0031695.1 MGP_BALBcJ_G0018905.1 mouse_genomes_project 11 93324216 93332847 - MGP_BALBcJ_P0031695 Eme1 protein_coding protein_coding MGP_BALBcJ_T0031696.1 MGP_BALBcJ_G0018905.1 mouse_genomes_project 11 93326952 93329713 - Eme1 protein_coding processed_transcript MGP_BALBcJ_T0031697.1 MGP_BALBcJ_G0018905.1 mouse_genomes_project 11 93329076 93329888 - Eme1 protein_coding processed_transcript MGP_BALBcJ_T0031698.1 MGP_BALBcJ_G0018905.1 mouse_genomes_project 11 93329757 93332554 - Eme1 protein_coding processed_transcript MGP_BALBcJ_T0012686.1 MGP_BALBcJ_G0010783.1 mouse_genomes_project 11 86046414 86048611 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032483.1 MGP_BALBcJ_G0019137.1 mouse_genomes_project 11 100279001 100284290 + MGP_BALBcJ_P0032483 Aoc2 protein_coding protein_coding MGP_BALBcJ_T0032484.1 MGP_BALBcJ_G0019137.1 mouse_genomes_project 11 100279025 100284082 + MGP_BALBcJ_P0032484 Aoc2 protein_coding protein_coding MGP_BALBcJ_T0027983.1 MGP_BALBcJ_G0017973.1 mouse_genomes_project 11 4042499 4157941 + MGP_BALBcJ_P0027983 Adcy1 protein_coding protein_coding MGP_BALBcJ_T0027984.1 MGP_BALBcJ_G0017973.1 mouse_genomes_project 11 4139317 4152314 + Adcy1 protein_coding processed_transcript MGP_BALBcJ_T0012651.1 MGP_BALBcJ_G0010748.1 mouse_genomes_project 11 74843545 74844048 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012548.1 MGP_BALBcJ_G0010645.1 mouse_genomes_project 11 38700506 38701050 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028527.1 MGP_BALBcJ_G0018105.1 mouse_genomes_project 11 38116905 38123665 - MGP_BALBcJ_P0028527 Ccng1 protein_coding protein_coding MGP_BALBcJ_T0028528.1 MGP_BALBcJ_G0018105.1 mouse_genomes_project 11 38117443 38122292 - Ccng1 protein_coding processed_transcript MGP_BALBcJ_T0032212.1 MGP_BALBcJ_G0019052.1 mouse_genomes_project 11 98540792 98541792 - MGP_BALBcJ_P0032212 Gm11563 protein_coding protein_coding MGP_BALBcJ_T0029215.1 MGP_BALBcJ_G0018300.1 mouse_genomes_project 11 56364139 56364616 - MGP_BALBcJ_P0029215 protein_coding protein_coding MGP_BALBcJ_T0030932.1 MGP_BALBcJ_G0018711.1 mouse_genomes_project 11 76613767 76623519 + MGP_BALBcJ_P0030932 Sdf2 protein_coding protein_coding MGP_BALBcJ_T0030933.1 MGP_BALBcJ_G0018711.1 mouse_genomes_project 11 76618445 76623519 + Sdf2 protein_coding processed_transcript MGP_BALBcJ_T0030934.1 MGP_BALBcJ_G0018711.1 mouse_genomes_project 11 76618918 76623140 + Sdf2 protein_coding retained_intron MGP_BALBcJ_T0029449.1 MGP_BALBcJ_G0018371.1 mouse_genomes_project 11 59015332 59065226 + MGP_BALBcJ_P0029449 Kcnj12 protein_coding protein_coding MGP_BALBcJ_T0029450.1 MGP_BALBcJ_G0018371.1 mouse_genomes_project 11 59059898 59065226 + MGP_BALBcJ_P0029450 Kcnj12 protein_coding protein_coding MGP_BALBcJ_T0029451.1 MGP_BALBcJ_G0018371.1 mouse_genomes_project 11 59059898 59065222 + MGP_BALBcJ_P0029451 Kcnj12 protein_coding protein_coding MGP_BALBcJ_T0031742.1 MGP_BALBcJ_G0018918.1 mouse_genomes_project 11 93851410 93856582 + MGP_BALBcJ_P0031742 Dlx3 protein_coding protein_coding MGP_BALBcJ_T0098312.1 MGP_BALBcJ_G0036366.1 mouse_genomes_project 11 112635261 112639301 + pseudogene pseudogene MGP_BALBcJ_T0032323.1 MGP_BALBcJ_G0019104.1 mouse_genomes_project 11 99554954 99562507 + MGP_BALBcJ_P0032323 Nkiras2 protein_coding protein_coding MGP_BALBcJ_T0032324.1 MGP_BALBcJ_G0019104.1 mouse_genomes_project 11 99555993 99562124 + MGP_BALBcJ_P0032324 Nkiras2 protein_coding protein_coding MGP_BALBcJ_T0032325.1 MGP_BALBcJ_G0019104.1 mouse_genomes_project 11 99558583 99563315 + MGP_BALBcJ_P0032325 Nkiras2 protein_coding protein_coding MGP_BALBcJ_T0032326.1 MGP_BALBcJ_G0019104.1 mouse_genomes_project 11 99558627 99560586 + Nkiras2 protein_coding processed_transcript MGP_BALBcJ_T0032327.1 MGP_BALBcJ_G0019104.1 mouse_genomes_project 11 99558655 99562294 + Nkiras2 protein_coding processed_transcript MGP_BALBcJ_T0032328.1 MGP_BALBcJ_G0019104.1 mouse_genomes_project 11 99558718 99561825 + MGP_BALBcJ_P0032328 Nkiras2 protein_coding protein_coding MGP_BALBcJ_T0033309.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114336200 114354354 - MGP_BALBcJ_P0033309 Cd300lf protein_coding protein_coding MGP_BALBcJ_T0033310.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114336200 114354354 - MGP_BALBcJ_P0033310 Cd300lf protein_coding protein_coding MGP_BALBcJ_T0033311.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114336200 114354354 - MGP_BALBcJ_P0033311 Cd300lf protein_coding protein_coding MGP_BALBcJ_T0033312.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114336946 114354243 - MGP_BALBcJ_P0033312 Cd300lf protein_coding unknown_likely_coding MGP_BALBcJ_T0033313.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114338820 114354353 - Cd300lf protein_coding processed_transcript MGP_BALBcJ_T0033314.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114340233 114346831 - Cd300lf protein_coding processed_transcript MGP_BALBcJ_T0033315.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114340317 114346778 - Cd300lf protein_coding processed_transcript MGP_BALBcJ_T0033316.1 MGP_BALBcJ_G0019315.1 mouse_genomes_project 11 114340329 114346772 - Cd300lf protein_coding processed_transcript MGP_BALBcJ_T0102129.1 MGP_BALBcJ_G0039946.1 mouse_genomes_project 11 4969847 4971490 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012729.1 MGP_BALBcJ_G0010826.1 mouse_genomes_project 11 102881990 102882319 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032216.1 MGP_BALBcJ_G0019056.1 mouse_genomes_project 11 98674259 98676044 - MGP_BALBcJ_P0032216 Gm11595 protein_coding protein_coding MGP_BALBcJ_T0030795.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75545987 75722891 + MGP_BALBcJ_P0030795 Ssh2 protein_coding protein_coding MGP_BALBcJ_T0030796.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75545987 75788272 + MGP_BALBcJ_P0030796 Ssh2 protein_coding protein_coding MGP_BALBcJ_T0030797.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75677613 75681105 + Ssh2 protein_coding retained_intron MGP_BALBcJ_T0030798.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75679196 75743358 + Ssh2 protein_coding processed_transcript MGP_BALBcJ_T0030799.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75679198 75783584 + MGP_BALBcJ_P0030799 Ssh2 protein_coding protein_coding MGP_BALBcJ_T0030800.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75679204 75761880 + Ssh2 protein_coding retained_intron MGP_BALBcJ_T0030801.1 MGP_BALBcJ_G0018685.1 mouse_genomes_project 11 75721174 75723741 + Ssh2 protein_coding retained_intron MGP_BALBcJ_T0028587.1 MGP_BALBcJ_G0018121.1 mouse_genomes_project 11 41762667 41776582 + MGP_BALBcJ_P0028587 Il12b protein_coding protein_coding MGP_BALBcJ_T0028588.1 MGP_BALBcJ_G0018121.1 mouse_genomes_project 11 41762667 41776606 + MGP_BALBcJ_P0028588 Il12b protein_coding protein_coding MGP_BALBcJ_T0100539.1 MGP_BALBcJ_G0038575.1 mouse_genomes_project 11 96607226 96607321 - Gm27326 snoRNA snoRNA MGP_BALBcJ_T0030165.1 MGP_BALBcJ_G0018526.1 mouse_genomes_project 11 68378758 68384370 - MGP_BALBcJ_P0030165 Bcl6b protein_coding protein_coding MGP_BALBcJ_T0030166.1 MGP_BALBcJ_G0018526.1 mouse_genomes_project 11 68383170 68384308 - MGP_BALBcJ_P0030166 Bcl6b protein_coding protein_coding MGP_BALBcJ_T0030167.1 MGP_BALBcJ_G0018526.1 mouse_genomes_project 11 68383239 68384429 - Bcl6b protein_coding retained_intron MGP_BALBcJ_T0100519.1 MGP_BALBcJ_G0038555.1 mouse_genomes_project 11 67794590 67794734 - Gm25835 snoRNA snoRNA MGP_BALBcJ_T0003327.1 MGP_BALBcJ_G0003068.1 mouse_genomes_project 11 115780707 115784539 - Gm29292 antisense antisense MGP_BALBcJ_T0009741.1 MGP_BALBcJ_G0007866.1 mouse_genomes_project 11 115037184 115037247 + Mir5621 miRNA miRNA MGP_BALBcJ_T0006181.1 MGP_BALBcJ_G0005164.1 mouse_genomes_project 11 29023004 29058788 - D630024D03Rik lincRNA lincRNA MGP_BALBcJ_T0006182.1 MGP_BALBcJ_G0005164.1 mouse_genomes_project 11 29033854 29058839 - D630024D03Rik lincRNA lincRNA MGP_BALBcJ_T0006183.1 MGP_BALBcJ_G0005164.1 mouse_genomes_project 11 29052393 29058788 - D630024D03Rik lincRNA lincRNA MGP_BALBcJ_T0032513.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100463969 100527663 - MGP_BALBcJ_P0032513 Brca1 protein_coding protein_coding MGP_BALBcJ_T0032514.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100471486 100483531 - Brca1 protein_coding retained_intron MGP_BALBcJ_T0032515.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100487845 100498082 - Brca1 protein_coding retained_intron MGP_BALBcJ_T0032516.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100499815 100500481 - MGP_BALBcJ_P0032516 Brca1 protein_coding protein_coding MGP_BALBcJ_T0032517.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100499829 100500829 - Brca1 protein_coding processed_transcript MGP_BALBcJ_T0032518.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100501129 100527739 - MGP_BALBcJ_P0032518 Brca1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032519.1 MGP_BALBcJ_G0019148.1 mouse_genomes_project 11 100507872 100527366 - MGP_BALBcJ_P0032519 Brca1 protein_coding protein_coding MGP_BALBcJ_T0033836.1 MGP_BALBcJ_G0019415.1 mouse_genomes_project 11 118278160 118286476 + MGP_BALBcJ_P0033836 Cbx2 protein_coding protein_coding MGP_BALBcJ_T0033837.1 MGP_BALBcJ_G0019415.1 mouse_genomes_project 11 118278923 118283244 + Cbx2 protein_coding processed_transcript MGP_BALBcJ_T0028859.1 MGP_BALBcJ_G0018199.1 mouse_genomes_project 11 48563504 48564567 + MGP_BALBcJ_P0028859 Olfr1377 protein_coding protein_coding MGP_BALBcJ_T0031495.1 MGP_BALBcJ_G0018857.1 mouse_genomes_project 11 86486775 86487812 - MGP_BALBcJ_P0031495 Olfr462 protein_coding protein_coding MGP_BALBcJ_T0006173.1 MGP_BALBcJ_G0005159.1 mouse_genomes_project 11 22373279 22395133 + Gm12069 lincRNA lincRNA MGP_BALBcJ_T0009747.1 MGP_BALBcJ_G0007872.1 mouse_genomes_project 11 118649912 118650002 + Mir1932 miRNA miRNA MGP_BALBcJ_T0003136.1 MGP_BALBcJ_G0002912.1 mouse_genomes_project 11 48287976 48289222 - Gm12199 antisense antisense MGP_BALBcJ_T0003151.1 MGP_BALBcJ_G0002925.1 mouse_genomes_project 11 52533750 52539580 + Gm12227 antisense antisense MGP_BALBcJ_T0029013.1 MGP_BALBcJ_G0018242.1 mouse_genomes_project 11 51410593 51467789 - MGP_BALBcJ_P0029013 Rad50 protein_coding protein_coding MGP_BALBcJ_T0029014.1 MGP_BALBcJ_G0018242.1 mouse_genomes_project 11 51436266 51467789 - MGP_BALBcJ_P0029014 Rad50 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029015.1 MGP_BALBcJ_G0018242.1 mouse_genomes_project 11 51440293 51441671 - Rad50 protein_coding processed_transcript MGP_BALBcJ_T0029016.1 MGP_BALBcJ_G0018242.1 mouse_genomes_project 11 51444963 51467765 - MGP_BALBcJ_P0029016 Rad50 protein_coding protein_coding MGP_BALBcJ_T0029017.1 MGP_BALBcJ_G0018242.1 mouse_genomes_project 11 51452261 51455342 - Rad50 protein_coding processed_transcript MGP_BALBcJ_T0031954.1 MGP_BALBcJ_G0018974.1 mouse_genomes_project 11 96315143 96382356 - MGP_BALBcJ_P0031954 Srcin1 protein_coding protein_coding MGP_BALBcJ_T0031955.1 MGP_BALBcJ_G0018974.1 mouse_genomes_project 11 96318629 96381194 - MGP_BALBcJ_P0031955 Srcin1 protein_coding protein_coding MGP_BALBcJ_T0031956.1 MGP_BALBcJ_G0018974.1 mouse_genomes_project 11 96318703 96381060 - MGP_BALBcJ_P0031956 Srcin1 protein_coding unknown_likely_coding MGP_BALBcJ_T0031957.1 MGP_BALBcJ_G0018974.1 mouse_genomes_project 11 96323378 96381085 - MGP_BALBcJ_P0031957 Srcin1 protein_coding protein_coding MGP_BALBcJ_T0031958.1 MGP_BALBcJ_G0018974.1 mouse_genomes_project 11 96341963 96381070 - MGP_BALBcJ_P0031958 Srcin1 protein_coding protein_coding MGP_BALBcJ_T0031959.1 MGP_BALBcJ_G0018974.1 mouse_genomes_project 11 96358820 96382369 - Srcin1 protein_coding processed_transcript MGP_BALBcJ_T0006353.1 MGP_BALBcJ_G0005297.1 mouse_genomes_project 11 119196195 119199759 + Gm11766 lincRNA lincRNA MGP_BALBcJ_T0027597.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 85705 127632 + MGP_BALBcJ_P0027597 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027598.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 85999 105570 + Eif4enif1 protein_coding retained_intron MGP_BALBcJ_T0027599.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 85999 127639 + MGP_BALBcJ_P0027599 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027600.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 86025 96763 + Eif4enif1 protein_coding retained_intron MGP_BALBcJ_T0027601.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 86070 103777 + MGP_BALBcJ_P0027601 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027602.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 86331 127636 + MGP_BALBcJ_P0027602 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027603.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 86357 127638 + MGP_BALBcJ_P0027603 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027604.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 86966 127637 + MGP_BALBcJ_P0027604 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027605.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 111004 113228 + Eif4enif1 protein_coding retained_intron MGP_BALBcJ_T0027606.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 111004 113191 + Eif4enif1 protein_coding retained_intron MGP_BALBcJ_T0027607.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 111050 122510 + MGP_BALBcJ_P0027607 Eif4enif1 protein_coding protein_coding MGP_BALBcJ_T0027608.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 117275 124026 + Eif4enif1 protein_coding retained_intron MGP_BALBcJ_T0027609.1 MGP_BALBcJ_G0017893.1 mouse_genomes_project 11 118601 122492 + Eif4enif1 protein_coding retained_intron MGP_BALBcJ_T0028681.1 MGP_BALBcJ_G0018147.1 mouse_genomes_project 11 46201581 46211240 - Irgm1 protein_coding processed_transcript MGP_BALBcJ_T0028682.1 MGP_BALBcJ_G0018147.1 mouse_genomes_project 11 46204858 46210931 - MGP_BALBcJ_P0028682 Irgm1 protein_coding protein_coding MGP_BALBcJ_T0028683.1 MGP_BALBcJ_G0018147.1 mouse_genomes_project 11 46205731 46210977 - MGP_BALBcJ_P0028683 Irgm1 protein_coding protein_coding MGP_BALBcJ_T0028748.1 MGP_BALBcJ_G0018173.1 mouse_genomes_project 11 47206023 47207532 + MGP_BALBcJ_P0028748 Scgb3a1 protein_coding protein_coding MGP_BALBcJ_T0028749.1 MGP_BALBcJ_G0018173.1 mouse_genomes_project 11 47206023 47207532 + MGP_BALBcJ_P0028749 Scgb3a1 protein_coding protein_coding MGP_BALBcJ_T0012510.1 MGP_BALBcJ_G0010607.1 mouse_genomes_project 11 24122537 24122756 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031585.1 MGP_BALBcJ_G0018883.1 mouse_genomes_project 11 90232685 90234929 - MGP_BALBcJ_P0031585 Kif2b protein_coding protein_coding MGP_BALBcJ_T0102167.1 MGP_BALBcJ_G0039984.1 mouse_genomes_project 11 99169496 99171189 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006323.1 MGP_BALBcJ_G0005275.1 mouse_genomes_project 11 111937769 111944347 - Gm11681 lincRNA lincRNA MGP_BALBcJ_T0017154.1 MGP_BALBcJ_G0015111.1 mouse_genomes_project 11 57428117 57436103 + 4933439C10Rik processed_transcript processed_transcript MGP_BALBcJ_T0017155.1 MGP_BALBcJ_G0015111.1 mouse_genomes_project 11 57428140 57433529 + 4933439C10Rik processed_transcript processed_transcript MGP_BALBcJ_T0017156.1 MGP_BALBcJ_G0015111.1 mouse_genomes_project 11 57428552 57429308 + 4933439C10Rik processed_transcript processed_transcript MGP_BALBcJ_T0017157.1 MGP_BALBcJ_G0015111.1 mouse_genomes_project 11 57428608 57432559 + 4933439C10Rik processed_transcript processed_transcript MGP_BALBcJ_T0017158.1 MGP_BALBcJ_G0015111.1 mouse_genomes_project 11 57429123 57432611 + 4933439C10Rik processed_transcript processed_transcript MGP_BALBcJ_T0017159.1 MGP_BALBcJ_G0015111.1 mouse_genomes_project 11 57430096 57433529 + 4933439C10Rik processed_transcript processed_transcript MGP_BALBcJ_T0028675.1 MGP_BALBcJ_G0018146.1 mouse_genomes_project 11 46175626 46188717 + MGP_BALBcJ_P0028675 protein_coding protein_coding MGP_BALBcJ_T0028676.1 MGP_BALBcJ_G0018146.1 mouse_genomes_project 11 46175632 46179595 + MGP_BALBcJ_P0028676 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028677.1 MGP_BALBcJ_G0018146.1 mouse_genomes_project 11 46176675 46183709 + MGP_BALBcJ_P0028677 protein_coding protein_coding MGP_BALBcJ_T0028678.1 MGP_BALBcJ_G0018146.1 mouse_genomes_project 11 46176965 46183766 + MGP_BALBcJ_P0028678 protein_coding protein_coding MGP_BALBcJ_T0028679.1 MGP_BALBcJ_G0018146.1 mouse_genomes_project 11 46176998 46190101 + MGP_BALBcJ_P0028679 protein_coding protein_coding MGP_BALBcJ_T0028680.1 MGP_BALBcJ_G0018146.1 mouse_genomes_project 11 46186063 46191123 + protein_coding retained_intron MGP_BALBcJ_T0102132.1 MGP_BALBcJ_G0039949.1 mouse_genomes_project 11 46405056 46520207 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012679.1 MGP_BALBcJ_G0010776.1 mouse_genomes_project 11 83659860 83660528 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031693.1 MGP_BALBcJ_G0018904.1 mouse_genomes_project 11 93308936 93324437 + MGP_BALBcJ_P0031693 Lrrc59 protein_coding protein_coding MGP_BALBcJ_T0031694.1 MGP_BALBcJ_G0018904.1 mouse_genomes_project 11 93308983 93314472 + Lrrc59 protein_coding retained_intron MGP_BALBcJ_T0031285.1 MGP_BALBcJ_G0018811.1 mouse_genomes_project 11 83360430 83367311 - MGP_BALBcJ_P0031285 Mrm1 protein_coding protein_coding MGP_BALBcJ_T0031286.1 MGP_BALBcJ_G0018811.1 mouse_genomes_project 11 83362538 83363186 - Mrm1 protein_coding retained_intron MGP_BALBcJ_T0031287.1 MGP_BALBcJ_G0018811.1 mouse_genomes_project 11 83362798 83366530 - Mrm1 protein_coding processed_transcript MGP_BALBcJ_T0032202.1 MGP_BALBcJ_G0019042.1 mouse_genomes_project 11 98447632 98448236 - MGP_BALBcJ_P0032202 Krtap3-1 protein_coding protein_coding MGP_BALBcJ_T0028341.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27314354 27485764 - MGP_BALBcJ_P0028341 Sptbn1 protein_coding protein_coding MGP_BALBcJ_T0028342.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27314355 27318210 - Sptbn1 protein_coding retained_intron MGP_BALBcJ_T0028343.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27314355 27436205 - MGP_BALBcJ_P0028343 Sptbn1 protein_coding protein_coding MGP_BALBcJ_T0028344.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27316472 27320571 - Sptbn1 protein_coding retained_intron MGP_BALBcJ_T0028345.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27321745 27414724 - MGP_BALBcJ_P0028345 Sptbn1 protein_coding protein_coding MGP_BALBcJ_T0028346.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27321846 27440146 - MGP_BALBcJ_P0028346 Sptbn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0028347.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27324899 27326388 - Sptbn1 protein_coding retained_intron MGP_BALBcJ_T0028348.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27324976 27484809 - MGP_BALBcJ_P0028348 Sptbn1 protein_coding protein_coding MGP_BALBcJ_T0028349.1 MGP_BALBcJ_G0018055.1 mouse_genomes_project 11 27433076 27485770 - Sptbn1 protein_coding retained_intron MGP_BALBcJ_T0030306.1 MGP_BALBcJ_G0018556.1 mouse_genomes_project 11 68957882 68966852 - MGP_BALBcJ_P0030306 Scimp protein_coding protein_coding MGP_BALBcJ_T0012654.1 MGP_BALBcJ_G0010751.1 mouse_genomes_project 11 75477351 75478249 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011287.1 MGP_BALBcJ_G0009412.1 mouse_genomes_project 11 87787359 87787621 - Gm24734 misc_RNA misc_RNA MGP_BALBcJ_T0032060.1 MGP_BALBcJ_G0018997.1 mouse_genomes_project 11 97222649 97223792 + MGP_BALBcJ_P0032060 Tcap protein_coding protein_coding MGP_BALBcJ_T0030697.1 MGP_BALBcJ_G0018662.1 mouse_genomes_project 11 74034022 74067163 + MGP_BALBcJ_P0030697 Ywhae protein_coding protein_coding MGP_BALBcJ_T0030698.1 MGP_BALBcJ_G0018662.1 mouse_genomes_project 11 74034066 74065943 + MGP_BALBcJ_P0030698 Ywhae protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030699.1 MGP_BALBcJ_G0018662.1 mouse_genomes_project 11 74034114 74058456 + Ywhae protein_coding retained_intron MGP_BALBcJ_T0030700.1 MGP_BALBcJ_G0018662.1 mouse_genomes_project 11 74034301 74058212 + MGP_BALBcJ_P0030700 Ywhae protein_coding protein_coding MGP_BALBcJ_T0030701.1 MGP_BALBcJ_G0018662.1 mouse_genomes_project 11 74052929 74060654 + Ywhae protein_coding retained_intron MGP_BALBcJ_T0029286.1 MGP_BALBcJ_G0018333.1 mouse_genomes_project 11 57127054 57144394 - MGP_BALBcJ_P0029286 Arf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0012452.1 MGP_BALBcJ_G0010549.1 mouse_genomes_project 11 5085772 5087506 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030537.1 MGP_BALBcJ_G0018622.1 mouse_genomes_project 11 72262519 72274741 - MGP_BALBcJ_P0030537 Olfr139 protein_coding protein_coding MGP_BALBcJ_T0030538.1 MGP_BALBcJ_G0018622.1 mouse_genomes_project 11 72262519 72263467 - MGP_BALBcJ_P0030538 Olfr139 protein_coding protein_coding MGP_BALBcJ_T0030539.1 MGP_BALBcJ_G0018622.1 mouse_genomes_project 11 72268626 72272223 - Olfr139 protein_coding processed_transcript MGP_BALBcJ_T0099258.1 MGP_BALBcJ_G0037294.1 mouse_genomes_project 11 67187982 67188083 + Gm25371 snRNA snRNA MGP_BALBcJ_T0003166.1 MGP_BALBcJ_G0002939.1 mouse_genomes_project 11 57874106 57875359 - Med9os antisense antisense MGP_BALBcJ_T0003167.1 MGP_BALBcJ_G0002939.1 mouse_genomes_project 11 57874106 57875360 - Med9os antisense antisense MGP_BALBcJ_T0003168.1 MGP_BALBcJ_G0002939.1 mouse_genomes_project 11 57874106 57875309 - Med9os antisense antisense MGP_BALBcJ_T0032237.1 MGP_BALBcJ_G0019077.1 mouse_genomes_project 11 98946623 98952846 - MGP_BALBcJ_P0032237 Krt33b protein_coding protein_coding MGP_BALBcJ_T0030741.1 MGP_BALBcJ_G0018672.1 mouse_genomes_project 11 74571675 74578589 + MGP_BALBcJ_P0030741 Rnmtl1 protein_coding protein_coding MGP_BALBcJ_T0030742.1 MGP_BALBcJ_G0018672.1 mouse_genomes_project 11 74571696 74572844 + Rnmtl1 protein_coding retained_intron MGP_BALBcJ_T0030743.1 MGP_BALBcJ_G0018672.1 mouse_genomes_project 11 74577180 74578477 + Rnmtl1 protein_coding processed_transcript MGP_BALBcJ_T0032339.1 MGP_BALBcJ_G0019107.1 mouse_genomes_project 11 99642623 99650051 - Kat2a protein_coding processed_transcript MGP_BALBcJ_T0032340.1 MGP_BALBcJ_G0019107.1 mouse_genomes_project 11 99642623 99650327 - Kat2a protein_coding processed_transcript MGP_BALBcJ_T0032341.1 MGP_BALBcJ_G0019107.1 mouse_genomes_project 11 99642623 99650343 - MGP_BALBcJ_P0032341 Kat2a protein_coding protein_coding MGP_BALBcJ_T0032342.1 MGP_BALBcJ_G0019107.1 mouse_genomes_project 11 99642623 99650343 - MGP_BALBcJ_P0032342 Kat2a protein_coding protein_coding MGP_BALBcJ_T0033675.1 MGP_BALBcJ_G0019381.1 mouse_genomes_project 11 115990813 116000714 - MGP_BALBcJ_P0033675 St6galnac1 protein_coding protein_coding MGP_BALBcJ_T0009720.1 MGP_BALBcJ_G0007845.1 mouse_genomes_project 11 97075698 97075776 + Gm27399 miRNA miRNA MGP_BALBcJ_T0030789.1 MGP_BALBcJ_G0018684.1 mouse_genomes_project 11 75411499 75518764 - MGP_BALBcJ_P0030789 Efcab5 protein_coding protein_coding MGP_BALBcJ_T0030790.1 MGP_BALBcJ_G0018684.1 mouse_genomes_project 11 75411528 75424849 - Efcab5 protein_coding retained_intron MGP_BALBcJ_T0030791.1 MGP_BALBcJ_G0018684.1 mouse_genomes_project 11 75411769 75479914 - MGP_BALBcJ_P0030791 Efcab5 protein_coding protein_coding MGP_BALBcJ_T0030792.1 MGP_BALBcJ_G0018684.1 mouse_genomes_project 11 75411882 75543864 - MGP_BALBcJ_P0030792 Efcab5 protein_coding unknown_likely_coding MGP_BALBcJ_T0030793.1 MGP_BALBcJ_G0018684.1 mouse_genomes_project 11 75424506 75464435 - Efcab5 protein_coding retained_intron MGP_BALBcJ_T0030794.1 MGP_BALBcJ_G0018684.1 mouse_genomes_project 11 75479524 75498580 - Efcab5 protein_coding processed_transcript MGP_BALBcJ_T0030529.1 MGP_BALBcJ_G0018616.1 mouse_genomes_project 11 72060754 72061693 - MGP_BALBcJ_P0030529 Olfr393 protein_coding protein_coding MGP_BALBcJ_T0012668.1 MGP_BALBcJ_G0010765.1 mouse_genomes_project 11 79257475 79257889 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028106.1 MGP_BALBcJ_G0018003.1 mouse_genomes_project 11 16944877 17047441 + MGP_BALBcJ_P0028106 Spred2 protein_coding protein_coding MGP_BALBcJ_T0028107.1 MGP_BALBcJ_G0018003.1 mouse_genomes_project 11 16944944 17043276 + MGP_BALBcJ_P0028107 Spred2 protein_coding protein_coding MGP_BALBcJ_T0028108.1 MGP_BALBcJ_G0018003.1 mouse_genomes_project 11 16975038 17038866 + MGP_BALBcJ_P0028108 Spred2 protein_coding protein_coding MGP_BALBcJ_T0033168.1 MGP_BALBcJ_G0019278.1 mouse_genomes_project 11 108676781 108715982 - MGP_BALBcJ_P0033168 Wipi1 protein_coding protein_coding MGP_BALBcJ_T0033169.1 MGP_BALBcJ_G0019278.1 mouse_genomes_project 11 108678581 108715982 - MGP_BALBcJ_P0033169 Wipi1 protein_coding protein_coding MGP_BALBcJ_T0033170.1 MGP_BALBcJ_G0019278.1 mouse_genomes_project 11 108685522 108715982 - MGP_BALBcJ_P0033170 Wipi1 protein_coding protein_coding MGP_BALBcJ_T0033171.1 MGP_BALBcJ_G0019278.1 mouse_genomes_project 11 108715788 108716517 - Wipi1 protein_coding processed_transcript MGP_BALBcJ_T0003147.1 MGP_BALBcJ_G0002922.1 mouse_genomes_project 11 51485921 51486587 - Gm12214 antisense antisense MGP_BALBcJ_T0006229.1 MGP_BALBcJ_G0005207.1 mouse_genomes_project 11 62188157 62205889 + Gm12290 lincRNA lincRNA MGP_BALBcJ_T0028650.1 MGP_BALBcJ_G0018139.1 mouse_genomes_project 11 43922615 43946493 - MGP_BALBcJ_P0028650 Dppa1 protein_coding protein_coding MGP_BALBcJ_T0028651.1 MGP_BALBcJ_G0018139.1 mouse_genomes_project 11 43923553 43946493 - MGP_BALBcJ_P0028651 Dppa1 protein_coding protein_coding MGP_BALBcJ_T0030517.1 MGP_BALBcJ_G0018609.1 mouse_genomes_project 11 71799419 71800358 - MGP_BALBcJ_P0030517 Olfr385 protein_coding protein_coding MGP_BALBcJ_T0012647.1 MGP_BALBcJ_G0010744.1 mouse_genomes_project 11 72588317 72589239 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006274.1 MGP_BALBcJ_G0005238.1 mouse_genomes_project 11 83310667 83324775 - Gm11431 lincRNA lincRNA MGP_BALBcJ_T0099297.1 MGP_BALBcJ_G0037333.1 mouse_genomes_project 11 101563939 101564043 - Gm25337 snRNA snRNA MGP_BALBcJ_T0000844.1 MGP_BALBcJ_G0000776.1 mouse_genomes_project 11 94769321 94770146 - TEC TEC MGP_BALBcJ_T0032071.1 MGP_BALBcJ_G0019001.1 mouse_genomes_project 11 97277743 97279027 - MGP_BALBcJ_P0032071 Mien1 protein_coding protein_coding MGP_BALBcJ_T0003227.1 MGP_BALBcJ_G0002989.1 mouse_genomes_project 11 83792902 83793351 + Appbp2os antisense pseudogene MGP_BALBcJ_T0003228.1 MGP_BALBcJ_G0002989.1 mouse_genomes_project 11 83793298 83796432 + Appbp2os antisense antisense MGP_BALBcJ_T0009625.1 MGP_BALBcJ_G0007750.1 mouse_genomes_project 11 1818738 1818796 + Mir6918 miRNA miRNA MGP_BALBcJ_T0003219.1 MGP_BALBcJ_G0002982.1 mouse_genomes_project 11 78569797 78588684 - Adap2os antisense antisense MGP_BALBcJ_T0028290.1 MGP_BALBcJ_G0018045.1 mouse_genomes_project 11 26418075 26449614 - MGP_BALBcJ_P0028290 Cfap36 protein_coding protein_coding MGP_BALBcJ_T0028291.1 MGP_BALBcJ_G0018045.1 mouse_genomes_project 11 26425799 26449490 - Cfap36 protein_coding retained_intron MGP_BALBcJ_T0028292.1 MGP_BALBcJ_G0018045.1 mouse_genomes_project 11 26430607 26449124 - MGP_BALBcJ_P0028292 Cfap36 protein_coding protein_coding MGP_BALBcJ_T0028293.1 MGP_BALBcJ_G0018045.1 mouse_genomes_project 11 26446000 26449270 - Cfap36 protein_coding retained_intron MGP_BALBcJ_T0028294.1 MGP_BALBcJ_G0018045.1 mouse_genomes_project 11 26446902 26449394 - Cfap36 protein_coding retained_intron MGP_BALBcJ_T0029019.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531490 51539105 + MGP_BALBcJ_P0029019 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029020.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531524 51536885 + MGP_BALBcJ_P0029020 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029021.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531527 51540156 + MGP_BALBcJ_P0029021 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029022.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531547 51538160 + Irf1 protein_coding processed_transcript MGP_BALBcJ_T0029023.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531581 51535867 + MGP_BALBcJ_P0029023 Irf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029024.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531952 51534720 + MGP_BALBcJ_P0029024 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029025.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531962 51535976 + MGP_BALBcJ_P0029025 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029026.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531970 51539105 + MGP_BALBcJ_P0029026 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029027.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51531984 51535739 + MGP_BALBcJ_P0029027 Irf1 protein_coding protein_coding MGP_BALBcJ_T0029029.1 MGP_BALBcJ_G0018244.1 mouse_genomes_project 11 51534934 51535912 + Irf1 protein_coding retained_intron MGP_BALBcJ_T0028081.1 MGP_BALBcJ_G0017995.1 mouse_genomes_project 11 13989018 14025991 - MGP_BALBcJ_P0028081 Plek protein_coding protein_coding MGP_BALBcJ_T0028082.1 MGP_BALBcJ_G0017995.1 mouse_genomes_project 11 14012308 14020413 - MGP_BALBcJ_P0028082 Plek protein_coding protein_coding MGP_BALBcJ_T0017244.1 MGP_BALBcJ_G0015155.1 mouse_genomes_project 11 113378790 113379732 + 1700092K14Rik processed_transcript processed_transcript MGP_BALBcJ_T0017138.1 MGP_BALBcJ_G0015100.1 mouse_genomes_project 11 27485058 27498787 + Gm8098 processed_transcript processed_transcript MGP_BALBcJ_T0031263.1 MGP_BALBcJ_G0018806.1 mouse_genomes_project 11 82615478 82666889 - MGP_BALBcJ_P0031263 Tada2a protein_coding protein_coding MGP_BALBcJ_T0031264.1 MGP_BALBcJ_G0018806.1 mouse_genomes_project 11 82616089 82619515 - Tada2a protein_coding processed_transcript MGP_BALBcJ_T0031265.1 MGP_BALBcJ_G0018806.1 mouse_genomes_project 11 82616194 82630774 - MGP_BALBcJ_P0031265 Tada2a protein_coding protein_coding MGP_BALBcJ_T0031266.1 MGP_BALBcJ_G0018806.1 mouse_genomes_project 11 82618596 82624008 - Tada2a protein_coding processed_transcript MGP_BALBcJ_T0031267.1 MGP_BALBcJ_G0018806.1 mouse_genomes_project 11 82621978 82624060 - Tada2a protein_coding processed_transcript MGP_BALBcJ_T0006336.1 MGP_BALBcJ_G0005283.1 mouse_genomes_project 11 114850417 114861979 + Gm26613 lincRNA lincRNA MGP_BALBcJ_T0033307.1 MGP_BALBcJ_G0019314.1 mouse_genomes_project 11 114311370 114367211 + Rab37 protein_coding retained_intron MGP_BALBcJ_T0033308.1 MGP_BALBcJ_G0019314.1 mouse_genomes_project 11 114311370 114380792 + MGP_BALBcJ_P0033308 Rab37 protein_coding protein_coding MGP_BALBcJ_T0033317.1 MGP_BALBcJ_G0019314.1 mouse_genomes_project 11 114372712 114380792 + MGP_BALBcJ_P0033317 Rab37 protein_coding protein_coding MGP_BALBcJ_T0033318.1 MGP_BALBcJ_G0019314.1 mouse_genomes_project 11 114372758 114376105 + Rab37 protein_coding retained_intron MGP_BALBcJ_T0012620.1 MGP_BALBcJ_G0010717.1 mouse_genomes_project 11 61832437 61833719 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012456.1 MGP_BALBcJ_G0010553.1 mouse_genomes_project 11 7356556 7356869 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033909.1 MGP_BALBcJ_G0019429.1 mouse_genomes_project 11 119171477 119173742 + MGP_BALBcJ_P0033909 Chmp6 protein_coding protein_coding MGP_BALBcJ_T0033910.1 MGP_BALBcJ_G0019429.1 mouse_genomes_project 11 119171522 119177186 + MGP_BALBcJ_P0033910 Chmp6 protein_coding protein_coding MGP_BALBcJ_T0033911.1 MGP_BALBcJ_G0019429.1 mouse_genomes_project 11 119173469 119176696 + Chmp6 protein_coding retained_intron MGP_BALBcJ_T0033912.1 MGP_BALBcJ_G0019429.1 mouse_genomes_project 11 119174378 119176276 + Chmp6 protein_coding retained_intron MGP_BALBcJ_T0029966.1 MGP_BALBcJ_G0018485.1 mouse_genomes_project 11 67789950 67791891 - MGP_BALBcJ_P0029966 Cd68 protein_coding protein_coding MGP_BALBcJ_T0029967.1 MGP_BALBcJ_G0018485.1 mouse_genomes_project 11 67790043 67791800 - Cd68 protein_coding processed_transcript MGP_BALBcJ_T0029968.1 MGP_BALBcJ_G0018485.1 mouse_genomes_project 11 67790108 67791800 - MGP_BALBcJ_P0029968 Cd68 protein_coding protein_coding MGP_BALBcJ_T0006330.1 MGP_BALBcJ_G0005278.1 mouse_genomes_project 11 112359906 112366267 - 4732490B19Rik lincRNA lincRNA MGP_BALBcJ_T0031224.1 MGP_BALBcJ_G0018792.1 mouse_genomes_project 11 82048223 82052964 - MGP_BALBcJ_P0031224 Ccl5 protein_coding protein_coding MGP_BALBcJ_T0031225.1 MGP_BALBcJ_G0018792.1 mouse_genomes_project 11 82051173 82052959 - Ccl5 protein_coding retained_intron MGP_BALBcJ_T0029596.1 MGP_BALBcJ_G0018394.1 mouse_genomes_project 11 60471293 60529045 + MGP_BALBcJ_P0029596 Pigl protein_coding protein_coding MGP_BALBcJ_T0029597.1 MGP_BALBcJ_G0018394.1 mouse_genomes_project 11 60471441 60526871 + Pigl protein_coding processed_transcript MGP_BALBcJ_T0102171.1 MGP_BALBcJ_G0039988.1 mouse_genomes_project 11 120032205 120034845 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0028746.1 MGP_BALBcJ_G0018172.1 mouse_genomes_project 11 47166654 47170951 + Flt4 protein_coding processed_transcript MGP_BALBcJ_T0028747.1 MGP_BALBcJ_G0018172.1 mouse_genomes_project 11 47166654 47195407 + MGP_BALBcJ_P0028747 Flt4 protein_coding protein_coding MGP_BALBcJ_T0102162.1 MGP_BALBcJ_G0039979.1 mouse_genomes_project 11 98587525 98587648 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0032127.1 MGP_BALBcJ_G0019015.1 mouse_genomes_project 11 97648868 97661224 + MGP_BALBcJ_P0032127 Msl1 protein_coding protein_coding MGP_BALBcJ_T0032128.1 MGP_BALBcJ_G0019015.1 mouse_genomes_project 11 97649143 97654405 + MGP_BALBcJ_P0032128 Msl1 protein_coding protein_coding MGP_BALBcJ_T0032129.1 MGP_BALBcJ_G0019015.1 mouse_genomes_project 11 97649152 97659787 + MGP_BALBcJ_P0032129 Msl1 protein_coding protein_coding MGP_BALBcJ_T0032130.1 MGP_BALBcJ_G0019015.1 mouse_genomes_project 11 97652006 97658960 + MGP_BALBcJ_P0032130 Msl1 protein_coding protein_coding MGP_BALBcJ_T0032131.1 MGP_BALBcJ_G0019015.1 mouse_genomes_project 11 97653517 97657472 + MGP_BALBcJ_P0032131 Msl1 protein_coding protein_coding MGP_BALBcJ_T0032132.1 MGP_BALBcJ_G0019015.1 mouse_genomes_project 11 97657623 97659132 + Msl1 protein_coding processed_transcript MGP_BALBcJ_T0029408.1 MGP_BALBcJ_G0018361.1 mouse_genomes_project 11 58679699 58694147 + MGP_BALBcJ_P0029408 Llgl1 protein_coding protein_coding MGP_BALBcJ_T0029409.1 MGP_BALBcJ_G0018361.1 mouse_genomes_project 11 58679821 58694147 + MGP_BALBcJ_P0029409 Llgl1 protein_coding protein_coding MGP_BALBcJ_T0029410.1 MGP_BALBcJ_G0018361.1 mouse_genomes_project 11 58684157 58686030 + Llgl1 protein_coding retained_intron MGP_BALBcJ_T0099259.1 MGP_BALBcJ_G0037295.1 mouse_genomes_project 11 67357826 67357931 + Gm23194 snRNA snRNA MGP_BALBcJ_T0006295.1 MGP_BALBcJ_G0005253.1 mouse_genomes_project 11 94417863 94420598 + Gm26830 lincRNA lincRNA MGP_BALBcJ_T0098313.1 MGP_BALBcJ_G0036367.1 mouse_genomes_project 11 119895064 119895565 - pseudogene pseudogene MGP_BALBcJ_T0027616.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 173763 175507 + Patz1 protein_coding processed_transcript MGP_BALBcJ_T0027617.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 174056 194816 + Patz1 protein_coding processed_transcript MGP_BALBcJ_T0027618.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 174091 180406 + Patz1 protein_coding processed_transcript MGP_BALBcJ_T0027619.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 174170 194816 + MGP_BALBcJ_P0027619 Patz1 protein_coding protein_coding MGP_BALBcJ_T0027620.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 175307 181163 + MGP_BALBcJ_P0027620 Patz1 protein_coding protein_coding MGP_BALBcJ_T0027621.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 175307 194816 + MGP_BALBcJ_P0027621 Patz1 protein_coding protein_coding MGP_BALBcJ_T0027622.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 175753 194816 + MGP_BALBcJ_P0027622 Patz1 protein_coding protein_coding MGP_BALBcJ_T0027623.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 175771 194816 + MGP_BALBcJ_P0027623 Patz1 protein_coding protein_coding MGP_BALBcJ_T0027624.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 176773 193875 + Patz1 protein_coding processed_transcript MGP_BALBcJ_T0027625.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 177509 179985 + Patz1 protein_coding processed_transcript MGP_BALBcJ_T0027626.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 178182 180212 + Patz1 protein_coding processed_transcript MGP_BALBcJ_T0027627.1 MGP_BALBcJ_G0017895.1 mouse_genomes_project 11 184017 193400 + MGP_BALBcJ_P0027627 Patz1 protein_coding protein_coding MGP_BALBcJ_T0012574.1 MGP_BALBcJ_G0010671.1 mouse_genomes_project 11 50221613 50221766 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012605.1 MGP_BALBcJ_G0010702.1 mouse_genomes_project 11 58276412 58277374 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009691.1 MGP_BALBcJ_G0007816.1 mouse_genomes_project 11 73840616 73840699 + Mir3971 miRNA miRNA MGP_BALBcJ_T0030510.1 MGP_BALBcJ_G0018604.1 mouse_genomes_project 11 71604448 71608868 - MGP_BALBcJ_P0030510 Olfr1 protein_coding protein_coding MGP_BALBcJ_T0030511.1 MGP_BALBcJ_G0018604.1 mouse_genomes_project 11 71604804 71608868 - MGP_BALBcJ_P0030511 Olfr1 protein_coding protein_coding MGP_BALBcJ_T0006156.1 MGP_BALBcJ_G0005143.1 mouse_genomes_project 11 17871952 17872391 - Gm12037 lincRNA lincRNA MGP_BALBcJ_T0028581.1 MGP_BALBcJ_G0018119.1 mouse_genomes_project 11 41066929 41086735 - MGP_BALBcJ_P0028581 Ttc1 protein_coding protein_coding MGP_BALBcJ_T0028582.1 MGP_BALBcJ_G0018119.1 mouse_genomes_project 11 41067426 41086709 - MGP_BALBcJ_P0028582 Ttc1 protein_coding protein_coding MGP_BALBcJ_T0028583.1 MGP_BALBcJ_G0018119.1 mouse_genomes_project 11 41082490 41086719 - Ttc1 protein_coding processed_transcript MGP_BALBcJ_T0003257.1 MGP_BALBcJ_G0003010.1 mouse_genomes_project 11 95127042 95139227 - Hoxb3os antisense antisense MGP_BALBcJ_T0003258.1 MGP_BALBcJ_G0003010.1 mouse_genomes_project 11 95129450 95131893 - Hoxb3os antisense antisense MGP_BALBcJ_T0003288.1 MGP_BALBcJ_G0003035.1 mouse_genomes_project 11 102206244 102208439 - Gm20511 antisense antisense MGP_BALBcJ_T0030044.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049854 68053915 - MGP_BALBcJ_P0030044 2810408A11Rik protein_coding protein_coding MGP_BALBcJ_T0030045.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049860 68053907 - MGP_BALBcJ_P0030045 2810408A11Rik protein_coding protein_coding MGP_BALBcJ_T0030046.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049865 68053978 - MGP_BALBcJ_P0030046 2810408A11Rik protein_coding protein_coding MGP_BALBcJ_T0030047.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049865 68053959 - MGP_BALBcJ_P0030047 2810408A11Rik protein_coding protein_coding MGP_BALBcJ_T0030048.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049865 68053996 - MGP_BALBcJ_P0030048 2810408A11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030049.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049968 68054008 - 2810408A11Rik protein_coding retained_intron MGP_BALBcJ_T0030050.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68049968 68053978 - MGP_BALBcJ_P0030050 2810408A11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030051.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68050707 68052151 - 2810408A11Rik protein_coding retained_intron MGP_BALBcJ_T0030052.1 MGP_BALBcJ_G0018506.1 mouse_genomes_project 11 68051714 68053960 - MGP_BALBcJ_P0030052 2810408A11Rik protein_coding protein_coding MGP_BALBcJ_T0011292.1 MGP_BALBcJ_G0009417.1 mouse_genomes_project 11 101473278 101473529 - Gm23563 misc_RNA misc_RNA MGP_BALBcJ_T0033339.1 MGP_BALBcJ_G0019321.1 mouse_genomes_project 11 114498702 114516878 - MGP_BALBcJ_P0033339 Fads6 protein_coding protein_coding MGP_BALBcJ_T0033340.1 MGP_BALBcJ_G0019321.1 mouse_genomes_project 11 114514367 114517027 - Fads6 protein_coding processed_transcript MGP_BALBcJ_T0032186.1 MGP_BALBcJ_G0019029.1 mouse_genomes_project 11 98184634 98192061 - MGP_BALBcJ_P0032186 Krt25 protein_coding protein_coding MGP_BALBcJ_T0034213.1 MGP_BALBcJ_G0019489.1 mouse_genomes_project 11 120649043 120681333 - MGP_BALBcJ_P0034213 Rab40b protein_coding protein_coding MGP_BALBcJ_T0034214.1 MGP_BALBcJ_G0019489.1 mouse_genomes_project 11 120650920 120681147 - Rab40b protein_coding processed_transcript MGP_BALBcJ_T0034215.1 MGP_BALBcJ_G0019489.1 mouse_genomes_project 11 120652509 120681303 - Rab40b protein_coding processed_transcript MGP_BALBcJ_T0034216.1 MGP_BALBcJ_G0019489.1 mouse_genomes_project 11 120652528 120681312 - Rab40b protein_coding processed_transcript MGP_BALBcJ_T0027884.1 MGP_BALBcJ_G0017951.1 mouse_genomes_project 11 2834686 2840792 - MGP_BALBcJ_P0027884 Pold2 protein_coding protein_coding MGP_BALBcJ_T0027885.1 MGP_BALBcJ_G0017951.1 mouse_genomes_project 11 2834694 2835698 - Pold2 protein_coding retained_intron MGP_BALBcJ_T0027886.1 MGP_BALBcJ_G0017951.1 mouse_genomes_project 11 2836594 2840165 - MGP_BALBcJ_P0027886 Pold2 protein_coding protein_coding MGP_BALBcJ_T0027887.1 MGP_BALBcJ_G0017951.1 mouse_genomes_project 11 2836631 2839267 - Pold2 protein_coding retained_intron MGP_BALBcJ_T0027888.1 MGP_BALBcJ_G0017951.1 mouse_genomes_project 11 2837684 2840712 - Pold2 protein_coding processed_transcript MGP_BALBcJ_T0032228.1 MGP_BALBcJ_G0019068.1 mouse_genomes_project 11 98794071 98799459 + MGP_BALBcJ_P0032228 Krtap9-1 protein_coding protein_coding MGP_BALBcJ_T0033348.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114567092 114587470 - MGP_BALBcJ_P0033348 Hid1 protein_coding protein_coding MGP_BALBcJ_T0033349.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114567092 114587507 - MGP_BALBcJ_P0033349 Hid1 protein_coding protein_coding MGP_BALBcJ_T0033350.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114568395 114570388 - Hid1 protein_coding processed_transcript MGP_BALBcJ_T0033351.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114573509 114575124 - Hid1 protein_coding processed_transcript MGP_BALBcJ_T0033352.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114575109 114587418 - MGP_BALBcJ_P0033352 Hid1 protein_coding protein_coding MGP_BALBcJ_T0033353.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114576439 114580065 - Hid1 protein_coding processed_transcript MGP_BALBcJ_T0033354.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114576534 114587360 - Hid1 protein_coding processed_transcript MGP_BALBcJ_T0033355.1 MGP_BALBcJ_G0019325.1 mouse_genomes_project 11 114578420 114579061 - Hid1 protein_coding processed_transcript MGP_BALBcJ_T0012585.1 MGP_BALBcJ_G0010682.1 mouse_genomes_project 11 52551528 52551949 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099269.1 MGP_BALBcJ_G0037305.1 mouse_genomes_project 11 78049936 78050039 - Gm25867 snRNA snRNA MGP_BALBcJ_T0032982.1 MGP_BALBcJ_G0019240.1 mouse_genomes_project 11 105244965 105276837 + MGP_BALBcJ_P0032982 Ddx42 protein_coding protein_coding MGP_BALBcJ_T0032983.1 MGP_BALBcJ_G0019240.1 mouse_genomes_project 11 105265002 105266489 + Ddx42 protein_coding processed_transcript MGP_BALBcJ_T0031840.1 MGP_BALBcJ_G0018950.1 mouse_genomes_project 11 95150084 95152537 + MGP_BALBcJ_P0031840 Hoxb1 protein_coding protein_coding MGP_BALBcJ_T0031841.1 MGP_BALBcJ_G0018950.1 mouse_genomes_project 11 95150590 95151554 + Hoxb1 protein_coding processed_transcript MGP_BALBcJ_T0027849.1 MGP_BALBcJ_G0017940.1 mouse_genomes_project 11 2134957 2205640 - MGP_BALBcJ_P0027849 Kremen1 protein_coding protein_coding MGP_BALBcJ_T0027850.1 MGP_BALBcJ_G0017940.1 mouse_genomes_project 11 2147817 2181979 - MGP_BALBcJ_P0027850 Kremen1 protein_coding protein_coding MGP_BALBcJ_T0028799.1 MGP_BALBcJ_G0018185.1 mouse_genomes_project 11 47847002 47880003 - MGP_BALBcJ_P0028799 Canx protein_coding protein_coding MGP_BALBcJ_T0028800.1 MGP_BALBcJ_G0018185.1 mouse_genomes_project 11 47847508 47880003 - MGP_BALBcJ_P0028800 Canx protein_coding protein_coding MGP_BALBcJ_T0028801.1 MGP_BALBcJ_G0018185.1 mouse_genomes_project 11 47849241 47852421 - Canx protein_coding processed_transcript MGP_BALBcJ_T0028802.1 MGP_BALBcJ_G0018185.1 mouse_genomes_project 11 47850406 47851362 - Canx protein_coding processed_transcript MGP_BALBcJ_T0028803.1 MGP_BALBcJ_G0018185.1 mouse_genomes_project 11 47851880 47854033 - Canx protein_coding processed_transcript MGP_BALBcJ_T0028211.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20557825 20566815 - MGP_BALBcJ_P0028211 Ahsa2 protein_coding protein_coding MGP_BALBcJ_T0028212.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20558859 20561583 - Ahsa2 protein_coding processed_transcript MGP_BALBcJ_T0028213.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20559597 20560701 - Ahsa2 protein_coding processed_transcript MGP_BALBcJ_T0028214.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20559674 20567131 - MGP_BALBcJ_P0028214 Ahsa2 protein_coding protein_coding MGP_BALBcJ_T0028215.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20559703 20560354 - Ahsa2 protein_coding processed_transcript MGP_BALBcJ_T0028216.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20560385 20567182 - MGP_BALBcJ_P0028216 Ahsa2 protein_coding protein_coding MGP_BALBcJ_T0028217.1 MGP_BALBcJ_G0018028.1 mouse_genomes_project 11 20562430 20567172 - MGP_BALBcJ_P0028217 Ahsa2 protein_coding protein_coding MGP_BALBcJ_T0028381.1 MGP_BALBcJ_G0018065.1 mouse_genomes_project 11 29105900 29164995 + MGP_BALBcJ_P0028381 Cpeb4 protein_coding protein_coding MGP_BALBcJ_T0028382.1 MGP_BALBcJ_G0018065.1 mouse_genomes_project 11 29105915 29169063 + MGP_BALBcJ_P0028382 Cpeb4 protein_coding protein_coding MGP_BALBcJ_T0028383.1 MGP_BALBcJ_G0018065.1 mouse_genomes_project 11 29106965 29169063 + MGP_BALBcJ_P0028383 Cpeb4 protein_coding protein_coding MGP_BALBcJ_T0033440.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114849122 114863611 - MGP_BALBcJ_P0033440 Slc25a19 protein_coding protein_coding MGP_BALBcJ_T0033441.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114850395 114857769 - MGP_BALBcJ_P0033441 Slc25a19 protein_coding protein_coding MGP_BALBcJ_T0033442.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114851493 114852842 - Slc25a19 protein_coding processed_transcript MGP_BALBcJ_T0033443.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114852598 114863379 - Slc25a19 protein_coding processed_transcript MGP_BALBcJ_T0033444.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114857950 114863378 - Slc25a19 protein_coding processed_transcript MGP_BALBcJ_T0033445.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114858358 114863384 - Slc25a19 protein_coding processed_transcript MGP_BALBcJ_T0033446.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114858820 114863553 - Slc25a19 protein_coding processed_transcript MGP_BALBcJ_T0033447.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114859142 114863384 - MGP_BALBcJ_P0033447 Slc25a19 protein_coding protein_coding MGP_BALBcJ_T0033448.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114859163 114863220 - MGP_BALBcJ_P0033448 Slc25a19 protein_coding protein_coding MGP_BALBcJ_T0033449.1 MGP_BALBcJ_G0019340.1 mouse_genomes_project 11 114859218 114863402 - MGP_BALBcJ_P0033449 Slc25a19 protein_coding protein_coding MGP_BALBcJ_T0031703.1 MGP_BALBcJ_G0018907.1 mouse_genomes_project 11 93342729 93356394 - MGP_BALBcJ_P0031703 Xylt2 protein_coding protein_coding MGP_BALBcJ_T0031704.1 MGP_BALBcJ_G0018907.1 mouse_genomes_project 11 93343465 93356394 - MGP_BALBcJ_P0031704 Xylt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031705.1 MGP_BALBcJ_G0018907.1 mouse_genomes_project 11 93345105 93347071 - MGP_BALBcJ_P0031705 Xylt2 protein_coding protein_coding MGP_BALBcJ_T0031706.1 MGP_BALBcJ_G0018907.1 mouse_genomes_project 11 93345749 93346681 - Xylt2 protein_coding retained_intron MGP_BALBcJ_T0031707.1 MGP_BALBcJ_G0018907.1 mouse_genomes_project 11 93347405 93356286 - MGP_BALBcJ_P0031707 Xylt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031708.1 MGP_BALBcJ_G0018907.1 mouse_genomes_project 11 93354841 93356292 - Xylt2 protein_coding processed_transcript MGP_BALBcJ_T0017211.1 MGP_BALBcJ_G0015140.1 mouse_genomes_project 11 96854486 96858331 + Gm11629 processed_transcript processed_transcript MGP_BALBcJ_T0031234.1 MGP_BALBcJ_G0018798.1 mouse_genomes_project 11 82234622 82236900 + MGP_BALBcJ_P0031234 Wfdc17 protein_coding protein_coding MGP_BALBcJ_T0102159.1 MGP_BALBcJ_G0039976.1 mouse_genomes_project 11 93548437 93549172 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031578.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89310234 89352480 - MGP_BALBcJ_P0031578 Tom1l1 protein_coding protein_coding MGP_BALBcJ_T0031579.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89310234 89352458 - MGP_BALBcJ_P0031579 Tom1l1 protein_coding protein_coding MGP_BALBcJ_T0031580.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89310234 89352449 - MGP_BALBcJ_P0031580 Tom1l1 protein_coding protein_coding MGP_BALBcJ_T0031581.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89310772 89314473 - Tom1l1 protein_coding retained_intron MGP_BALBcJ_T0031582.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89321597 89327838 - Tom1l1 protein_coding retained_intron MGP_BALBcJ_T0031583.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89335192 89352467 - MGP_BALBcJ_P0031583 Tom1l1 protein_coding protein_coding MGP_BALBcJ_T0031584.1 MGP_BALBcJ_G0018882.1 mouse_genomes_project 11 89348159 89353244 - Tom1l1 protein_coding processed_transcript MGP_BALBcJ_T0006219.1 MGP_BALBcJ_G0005198.1 mouse_genomes_project 11 57848573 57848964 + 1810063I02Rik lincRNA lincRNA MGP_BALBcJ_T0030383.1 MGP_BALBcJ_G0018569.1 mouse_genomes_project 11 70228517 70320719 - MGP_BALBcJ_P0030383 Pitpnm3 protein_coding protein_coding MGP_BALBcJ_T0030384.1 MGP_BALBcJ_G0018569.1 mouse_genomes_project 11 70228517 70320662 - MGP_BALBcJ_P0030384 Pitpnm3 protein_coding protein_coding MGP_BALBcJ_T0030385.1 MGP_BALBcJ_G0018569.1 mouse_genomes_project 11 70232098 70233039 - Pitpnm3 protein_coding processed_transcript MGP_BALBcJ_T0030386.1 MGP_BALBcJ_G0018569.1 mouse_genomes_project 11 70238600 70242517 - Pitpnm3 protein_coding retained_intron MGP_BALBcJ_T0030387.1 MGP_BALBcJ_G0018569.1 mouse_genomes_project 11 70248757 70320719 - Pitpnm3 protein_coding retained_intron MGP_BALBcJ_T0006303.1 MGP_BALBcJ_G0005258.1 mouse_genomes_project 11 95501909 95535921 - 2010300F17Rik lincRNA lincRNA MGP_BALBcJ_T0006304.1 MGP_BALBcJ_G0005258.1 mouse_genomes_project 11 95534508 95535895 - 2010300F17Rik lincRNA lincRNA MGP_BALBcJ_T0031012.1 MGP_BALBcJ_G0018732.1 mouse_genomes_project 11 77361766 77383730 - MGP_BALBcJ_P0031012 Lgals9 protein_coding protein_coding MGP_BALBcJ_T0031013.1 MGP_BALBcJ_G0018732.1 mouse_genomes_project 11 77361771 77383708 - MGP_BALBcJ_P0031013 Lgals9 protein_coding protein_coding MGP_BALBcJ_T0031014.1 MGP_BALBcJ_G0018732.1 mouse_genomes_project 11 77362187 77383615 - MGP_BALBcJ_P0031014 Lgals9 protein_coding protein_coding MGP_BALBcJ_T0031015.1 MGP_BALBcJ_G0018732.1 mouse_genomes_project 11 77365673 77369123 - Lgals9 protein_coding retained_intron MGP_BALBcJ_T0012490.1 MGP_BALBcJ_G0010587.1 mouse_genomes_project 11 18249488 18250025 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006186.1 MGP_BALBcJ_G0005167.1 mouse_genomes_project 11 30045400 30046364 - 4930555O08Rik lincRNA lincRNA MGP_BALBcJ_T0012688.1 MGP_BALBcJ_G0010785.1 mouse_genomes_project 11 86548507 86548919 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102135.1 MGP_BALBcJ_G0039952.1 mouse_genomes_project 11 51704389 51704561 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0030648.1 MGP_BALBcJ_G0018653.1 mouse_genomes_project 11 73748369 73756350 + Tlcd2 protein_coding processed_transcript MGP_BALBcJ_T0030649.1 MGP_BALBcJ_G0018653.1 mouse_genomes_project 11 73754729 73757713 + MGP_BALBcJ_P0030649 Tlcd2 protein_coding protein_coding MGP_BALBcJ_T0030650.1 MGP_BALBcJ_G0018653.1 mouse_genomes_project 11 73754729 73757955 + MGP_BALBcJ_P0030650 Tlcd2 protein_coding protein_coding MGP_BALBcJ_T0030651.1 MGP_BALBcJ_G0018653.1 mouse_genomes_project 11 73755361 73756762 + Tlcd2 protein_coding retained_intron MGP_BALBcJ_T0031435.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86148965 86165236 + MGP_BALBcJ_P0031435 Sept4 protein_coding protein_coding MGP_BALBcJ_T0031436.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158472 86170241 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031437.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158507 86171594 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031438.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158516 86166026 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031439.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158530 86171594 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031440.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158544 86165854 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031441.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158595 86171600 + MGP_BALBcJ_P0031441 Sept4 protein_coding protein_coding MGP_BALBcJ_T0031442.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86158988 86170329 + MGP_BALBcJ_P0031442 Sept4 protein_coding protein_coding MGP_BALBcJ_T0031443.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86161093 86171594 + MGP_BALBcJ_P0031443 Sept4 protein_coding protein_coding MGP_BALBcJ_T0031444.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86161113 86171430 + MGP_BALBcJ_P0031444 Sept4 protein_coding protein_coding MGP_BALBcJ_T0031445.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86161121 86166026 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031446.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86161126 86171594 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031447.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86162261 86170096 + MGP_BALBcJ_P0031447 Sept4 protein_coding protein_coding MGP_BALBcJ_T0031448.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86165219 86170919 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031449.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86169922 86171049 + Sept4 protein_coding retained_intron MGP_BALBcJ_T0031450.1 MGP_BALBcJ_G0018846.1 mouse_genomes_project 11 86170531 86171594 + Sept4 protein_coding processed_transcript MGP_BALBcJ_T0031821.1 MGP_BALBcJ_G0018941.1 mouse_genomes_project 11 94963042 94966174 + MGP_BALBcJ_P0031821 Hoxb13 protein_coding protein_coding MGP_BALBcJ_T0028992.1 MGP_BALBcJ_G0018237.1 mouse_genomes_project 11 51238848 51239780 + MGP_BALBcJ_P0028992 Gm9945 protein_coding protein_coding MGP_BALBcJ_T0012506.1 MGP_BALBcJ_G0010603.1 mouse_genomes_project 11 23478339 23479635 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030616.1 MGP_BALBcJ_G0018645.1 mouse_genomes_project 11 73459179 73462073 - MGP_BALBcJ_P0030616 Ovca2 protein_coding protein_coding MGP_BALBcJ_T0030619.1 MGP_BALBcJ_G0018645.1 mouse_genomes_project 11 73461038 73462025 - Ovca2 protein_coding processed_transcript MGP_BALBcJ_T0031354.1 MGP_BALBcJ_G0018825.1 mouse_genomes_project 11 84445040 84475635 + MGP_BALBcJ_P0031354 Tbx4 protein_coding protein_coding MGP_BALBcJ_T0031355.1 MGP_BALBcJ_G0018825.1 mouse_genomes_project 11 84448681 84475637 + MGP_BALBcJ_P0031355 Tbx4 protein_coding protein_coding MGP_BALBcJ_T0031356.1 MGP_BALBcJ_G0018825.1 mouse_genomes_project 11 84455728 84475635 + MGP_BALBcJ_P0031356 Tbx4 protein_coding protein_coding MGP_BALBcJ_T0006209.1 MGP_BALBcJ_G0005189.1 mouse_genomes_project 11 48688516 48698315 + 9230009I02Rik lincRNA lincRNA MGP_BALBcJ_T0033838.1 MGP_BALBcJ_G0019416.1 mouse_genomes_project 11 118291724 118296391 - MGP_BALBcJ_P0033838 Cbx8 protein_coding protein_coding MGP_BALBcJ_T0033839.1 MGP_BALBcJ_G0019416.1 mouse_genomes_project 11 118294474 118296253 - Cbx8 protein_coding processed_transcript MGP_BALBcJ_T0033840.1 MGP_BALBcJ_G0019416.1 mouse_genomes_project 11 118294605 118296333 - Cbx8 protein_coding processed_transcript MGP_BALBcJ_T0034131.1 MGP_BALBcJ_G0019471.1 mouse_genomes_project 11 120052121 120054183 + Gps1 protein_coding retained_intron MGP_BALBcJ_T0034132.1 MGP_BALBcJ_G0019471.1 mouse_genomes_project 11 120052124 120057767 + MGP_BALBcJ_P0034132 Gps1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034133.1 MGP_BALBcJ_G0019471.1 mouse_genomes_project 11 120052146 120058090 + MGP_BALBcJ_P0034133 Gps1 protein_coding protein_coding MGP_BALBcJ_T0034134.1 MGP_BALBcJ_G0019471.1 mouse_genomes_project 11 120055316 120056306 + Gps1 protein_coding retained_intron MGP_BALBcJ_T0029291.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57328345 57372136 - MGP_BALBcJ_P0029291 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029292.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57328355 57372144 - MGP_BALBcJ_P0029292 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029293.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57349793 57372136 - MGP_BALBcJ_P0029293 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029294.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57349799 57372050 - MGP_BALBcJ_P0029294 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029295.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57358675 57372136 - MGP_BALBcJ_P0029295 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029296.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57358897 57368441 - MGP_BALBcJ_P0029296 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029297.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57358929 57372053 - MGP_BALBcJ_P0029297 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029298.1 MGP_BALBcJ_G0018337.1 mouse_genomes_project 11 57359090 57373323 - MGP_BALBcJ_P0029298 Snap47 protein_coding protein_coding MGP_BALBcJ_T0029996.1 MGP_BALBcJ_G0018490.1 mouse_genomes_project 11 67812624 67822599 - MGP_BALBcJ_P0029996 Tnfsf12 protein_coding protein_coding MGP_BALBcJ_T0029997.1 MGP_BALBcJ_G0018490.1 mouse_genomes_project 11 67813714 67822271 - MGP_BALBcJ_P0029997 Tnfsf12 protein_coding protein_coding MGP_BALBcJ_T0032651.1 MGP_BALBcJ_G0019172.1 mouse_genomes_project 11 101294043 101298189 - Atxn7l3 protein_coding retained_intron MGP_BALBcJ_T0032652.1 MGP_BALBcJ_G0019172.1 mouse_genomes_project 11 101294043 101300056 - MGP_BALBcJ_P0032652 Atxn7l3 protein_coding protein_coding MGP_BALBcJ_T0032653.1 MGP_BALBcJ_G0019172.1 mouse_genomes_project 11 101294043 101301871 - MGP_BALBcJ_P0032653 Atxn7l3 protein_coding protein_coding MGP_BALBcJ_T0032654.1 MGP_BALBcJ_G0019172.1 mouse_genomes_project 11 101294043 101299731 - MGP_BALBcJ_P0032654 Atxn7l3 protein_coding protein_coding MGP_BALBcJ_T0032655.1 MGP_BALBcJ_G0019172.1 mouse_genomes_project 11 101294043 101298907 - MGP_BALBcJ_P0032655 Atxn7l3 protein_coding protein_coding MGP_BALBcJ_T0032656.1 MGP_BALBcJ_G0019172.1 mouse_genomes_project 11 101294044 101301869 - MGP_BALBcJ_P0032656 Atxn7l3 protein_coding protein_coding MGP_BALBcJ_T0003159.1 MGP_BALBcJ_G0002932.1 mouse_genomes_project 11 55460610 55463165 - 4933426K07Rik antisense antisense MGP_BALBcJ_T0032506.1 MGP_BALBcJ_G0019145.1 mouse_genomes_project 11 100422708 100432986 + MGP_BALBcJ_P0032506 Ifi35 protein_coding protein_coding MGP_BALBcJ_T0032507.1 MGP_BALBcJ_G0019145.1 mouse_genomes_project 11 100422745 100432413 + Ifi35 protein_coding retained_intron MGP_BALBcJ_T0032508.1 MGP_BALBcJ_G0019145.1 mouse_genomes_project 11 100422871 100432752 + MGP_BALBcJ_P0032508 Ifi35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033708.1 MGP_BALBcJ_G0019387.1 mouse_genomes_project 11 116137059 116205214 + MGP_BALBcJ_P0033708 Mgat5b protein_coding protein_coding MGP_BALBcJ_T0033709.1 MGP_BALBcJ_G0019387.1 mouse_genomes_project 11 116165651 116192585 + Mgat5b protein_coding processed_transcript MGP_BALBcJ_T0033710.1 MGP_BALBcJ_G0019387.1 mouse_genomes_project 11 116185064 116196667 + MGP_BALBcJ_P0033710 Mgat5b protein_coding protein_coding MGP_BALBcJ_T0033711.1 MGP_BALBcJ_G0019387.1 mouse_genomes_project 11 116191350 116205206 + Mgat5b protein_coding retained_intron MGP_BALBcJ_T0030191.1 MGP_BALBcJ_G0018533.1 mouse_genomes_project 11 68552878 68570023 - MGP_BALBcJ_P0030191 Pelp1 protein_coding protein_coding MGP_BALBcJ_T0030192.1 MGP_BALBcJ_G0018533.1 mouse_genomes_project 11 68562631 68570026 - MGP_BALBcJ_P0030192 Pelp1 protein_coding protein_coding MGP_BALBcJ_T0030991.1 MGP_BALBcJ_G0018725.1 mouse_genomes_project 11 76886346 76897120 + MGP_BALBcJ_P0030991 Poldip2 protein_coding protein_coding MGP_BALBcJ_T0030992.1 MGP_BALBcJ_G0018725.1 mouse_genomes_project 11 76886541 76888142 + Poldip2 protein_coding processed_transcript MGP_BALBcJ_T0030993.1 MGP_BALBcJ_G0018725.1 mouse_genomes_project 11 76886569 76896555 + MGP_BALBcJ_P0030993 Poldip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030994.1 MGP_BALBcJ_G0018725.1 mouse_genomes_project 11 76890390 76892316 + Poldip2 protein_coding retained_intron MGP_BALBcJ_T0030995.1 MGP_BALBcJ_G0018725.1 mouse_genomes_project 11 76890980 76892969 + Poldip2 protein_coding retained_intron MGP_BALBcJ_T0030996.1 MGP_BALBcJ_G0018725.1 mouse_genomes_project 11 76892714 76893645 + Poldip2 protein_coding retained_intron MGP_BALBcJ_T0031478.1 MGP_BALBcJ_G0018852.1 mouse_genomes_project 11 86380894 86392014 + MGP_BALBcJ_P0031478 Mpo protein_coding protein_coding MGP_BALBcJ_T0031479.1 MGP_BALBcJ_G0018852.1 mouse_genomes_project 11 86381111 86383323 + MGP_BALBcJ_P0031479 Mpo protein_coding protein_coding MGP_BALBcJ_T0031480.1 MGP_BALBcJ_G0018852.1 mouse_genomes_project 11 86381525 86392014 + MGP_BALBcJ_P0031480 Mpo protein_coding protein_coding MGP_BALBcJ_T0031481.1 MGP_BALBcJ_G0018852.1 mouse_genomes_project 11 86382474 86387139 + MGP_BALBcJ_P0031481 Mpo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031482.1 MGP_BALBcJ_G0018852.1 mouse_genomes_project 11 86390142 86391426 + MGP_BALBcJ_P0031482 Mpo protein_coding protein_coding MGP_BALBcJ_T0031483.1 MGP_BALBcJ_G0018852.1 mouse_genomes_project 11 86390717 86391974 + Mpo protein_coding retained_intron MGP_BALBcJ_T0028625.1 MGP_BALBcJ_G0018131.1 mouse_genomes_project 11 43525974 43648528 - MGP_BALBcJ_P0028625 Cyfip2 protein_coding protein_coding MGP_BALBcJ_T0028626.1 MGP_BALBcJ_G0018131.1 mouse_genomes_project 11 43525974 43648027 - MGP_BALBcJ_P0028626 Cyfip2 protein_coding protein_coding MGP_BALBcJ_T0028627.1 MGP_BALBcJ_G0018131.1 mouse_genomes_project 11 43525979 43647963 - MGP_BALBcJ_P0028627 Cyfip2 protein_coding protein_coding MGP_BALBcJ_T0028628.1 MGP_BALBcJ_G0018131.1 mouse_genomes_project 11 43528195 43603426 - MGP_BALBcJ_P0028628 Cyfip2 protein_coding protein_coding MGP_BALBcJ_T0028630.1 MGP_BALBcJ_G0018131.1 mouse_genomes_project 11 43625160 43647889 - MGP_BALBcJ_P0028630 Cyfip2 protein_coding protein_coding MGP_BALBcJ_T0003153.1 MGP_BALBcJ_G0002927.1 mouse_genomes_project 11 52950982 52954106 + Slc36a3os antisense antisense MGP_BALBcJ_T0028398.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29451706 29464443 - MGP_BALBcJ_P0028398 Rhbdf1 protein_coding protein_coding MGP_BALBcJ_T0028399.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29451707 29459442 - Rhbdf1 protein_coding retained_intron MGP_BALBcJ_T0028400.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29451708 29464423 - MGP_BALBcJ_P0028400 Rhbdf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028401.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29451925 29453261 - MGP_BALBcJ_P0028401 Rhbdf1 protein_coding protein_coding MGP_BALBcJ_T0028402.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29452071 29453022 - Rhbdf1 protein_coding retained_intron MGP_BALBcJ_T0028403.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29452520 29453392 - Rhbdf1 protein_coding retained_intron MGP_BALBcJ_T0028404.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29456408 29464423 - MGP_BALBcJ_P0028404 Rhbdf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028405.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29457187 29464387 - MGP_BALBcJ_P0028405 Rhbdf1 protein_coding protein_coding MGP_BALBcJ_T0028406.1 MGP_BALBcJ_G0018070.1 mouse_genomes_project 11 29458121 29464402 - MGP_BALBcJ_P0028406 Rhbdf1 protein_coding protein_coding MGP_BALBcJ_T0003135.1 MGP_BALBcJ_G0002911.1 mouse_genomes_project 11 47684794 47685717 - Gm12195 antisense antisense MGP_BALBcJ_T0099244.1 MGP_BALBcJ_G0037280.1 mouse_genomes_project 11 37195722 37195867 + Gm24192 snRNA snRNA MGP_BALBcJ_T0030168.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68389827 68392431 - MGP_BALBcJ_P0030168 0610010K14Rik protein_coding protein_coding MGP_BALBcJ_T0030170.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68389835 68392480 - MGP_BALBcJ_P0030170 0610010K14Rik protein_coding protein_coding MGP_BALBcJ_T0030171.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68389835 68392531 - MGP_BALBcJ_P0030171 0610010K14Rik protein_coding protein_coding MGP_BALBcJ_T0030172.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68389835 68390826 - MGP_BALBcJ_P0030172 0610010K14Rik protein_coding protein_coding MGP_BALBcJ_T0030173.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68389835 68392541 - MGP_BALBcJ_P0030173 0610010K14Rik protein_coding protein_coding MGP_BALBcJ_T0030175.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68389991 68392305 - MGP_BALBcJ_P0030175 0610010K14Rik protein_coding protein_coding MGP_BALBcJ_T0030176.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68390000 68392116 - 0610010K14Rik protein_coding processed_transcript MGP_BALBcJ_T0030177.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68390008 68392390 - 0610010K14Rik protein_coding processed_transcript MGP_BALBcJ_T0030178.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68390365 68392488 - MGP_BALBcJ_P0030178 0610010K14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030179.1 MGP_BALBcJ_G0018527.1 mouse_genomes_project 11 68391080 68392539 - 0610010K14Rik protein_coding retained_intron MGP_BALBcJ_T0029173.1 MGP_BALBcJ_G0018284.1 mouse_genomes_project 11 55947020 55995479 - MGP_BALBcJ_P0029173 Gemin5 protein_coding protein_coding MGP_BALBcJ_T0029174.1 MGP_BALBcJ_G0018284.1 mouse_genomes_project 11 55948308 55995479 - MGP_BALBcJ_P0029174 Gemin5 protein_coding protein_coding MGP_BALBcJ_T0029175.1 MGP_BALBcJ_G0018284.1 mouse_genomes_project 11 55948308 55995479 - MGP_BALBcJ_P0029175 Gemin5 protein_coding protein_coding MGP_BALBcJ_T0029176.1 MGP_BALBcJ_G0018284.1 mouse_genomes_project 11 55964001 55966553 - Gemin5 protein_coding processed_transcript MGP_BALBcJ_T0029177.1 MGP_BALBcJ_G0018284.1 mouse_genomes_project 11 55981884 55987715 - MGP_BALBcJ_P0029177 Gemin5 protein_coding protein_coding MGP_BALBcJ_T0032855.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102823287 102957854 - MGP_BALBcJ_P0032855 Nsf protein_coding protein_coding MGP_BALBcJ_T0032856.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102824430 102828926 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032857.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102824439 102825595 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032858.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102849011 102874272 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032859.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102863161 102874394 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032860.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102882593 102957822 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032861.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102911498 102957822 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032862.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102912525 102940913 - MGP_BALBcJ_P0032862 Nsf protein_coding protein_coding MGP_BALBcJ_T0032863.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102912629 102928363 - Nsf protein_coding retained_intron MGP_BALBcJ_T0032864.1 MGP_BALBcJ_G0019212.1 mouse_genomes_project 11 102928359 102940913 - MGP_BALBcJ_P0032864 Nsf protein_coding protein_coding MGP_BALBcJ_T0011777.1 MGP_BALBcJ_G0009899.1 mouse_genomes_project 11 71645779 71646713 - MGP_BALBcJ_P0011777 Olfr379-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0027988.1 MGP_BALBcJ_G0017976.1 mouse_genomes_project 11 5394210 5628049 - MGP_BALBcJ_P0027988 Tns3 protein_coding protein_coding MGP_BALBcJ_T0027989.1 MGP_BALBcJ_G0017976.1 mouse_genomes_project 11 5413609 5431486 - Tns3 protein_coding processed_transcript MGP_BALBcJ_T0027990.1 MGP_BALBcJ_G0017976.1 mouse_genomes_project 11 5499069 5506575 - Tns3 protein_coding processed_transcript MGP_BALBcJ_T0027991.1 MGP_BALBcJ_G0017976.1 mouse_genomes_project 11 5506888 5539876 - Tns3 protein_coding processed_transcript MGP_BALBcJ_T0012550.1 MGP_BALBcJ_G0010647.1 mouse_genomes_project 11 39114050 39114382 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029660.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 62994146 63016816 + MGP_BALBcJ_P0029660 Elac2 protein_coding protein_coding MGP_BALBcJ_T0029661.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 62994179 63016075 + MGP_BALBcJ_P0029661 Elac2 protein_coding protein_coding MGP_BALBcJ_T0029662.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 62994180 62995750 + Elac2 protein_coding processed_transcript MGP_BALBcJ_T0029663.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 62994182 63016347 + MGP_BALBcJ_P0029663 Elac2 protein_coding protein_coding MGP_BALBcJ_T0029664.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 62994199 63016814 + Elac2 protein_coding processed_transcript MGP_BALBcJ_T0029665.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 63000563 63007579 + MGP_BALBcJ_P0029665 Elac2 protein_coding protein_coding MGP_BALBcJ_T0029666.1 MGP_BALBcJ_G0018413.1 mouse_genomes_project 11 63015082 63016635 + Elac2 protein_coding processed_transcript MGP_BALBcJ_T0000832.1 MGP_BALBcJ_G0000764.1 mouse_genomes_project 11 6699372 6699735 - TEC TEC MGP_BALBcJ_T0031496.1 MGP_BALBcJ_G0018858.1 mouse_genomes_project 11 86516694 86517778 - MGP_BALBcJ_P0031496 Olfr464 protein_coding protein_coding MGP_BALBcJ_T0031497.1 MGP_BALBcJ_G0018858.1 mouse_genomes_project 11 86517339 86519278 - MGP_BALBcJ_P0031497 Olfr464 protein_coding protein_coding MGP_BALBcJ_T0028434.1 MGP_BALBcJ_G0018077.1 mouse_genomes_project 11 29707991 29769685 + MGP_BALBcJ_P0028434 Ubtd2 protein_coding protein_coding MGP_BALBcJ_T0034187.1 MGP_BALBcJ_G0019483.1 mouse_genomes_project 11 120468049 120495493 - MGP_BALBcJ_P0034187 Ogfod3 protein_coding protein_coding MGP_BALBcJ_T0030101.1 MGP_BALBcJ_G0018515.1 mouse_genomes_project 11 68144690 68148453 + MGP_BALBcJ_P0030101 Gabarap protein_coding protein_coding MGP_BALBcJ_T0030102.1 MGP_BALBcJ_G0018515.1 mouse_genomes_project 11 68145186 68148442 + MGP_BALBcJ_P0030102 Gabarap protein_coding protein_coding MGP_BALBcJ_T0030103.1 MGP_BALBcJ_G0018515.1 mouse_genomes_project 11 68145231 68148437 + Gabarap protein_coding retained_intron MGP_BALBcJ_T0030104.1 MGP_BALBcJ_G0018515.1 mouse_genomes_project 11 68145354 68146149 + Gabarap protein_coding processed_transcript MGP_BALBcJ_T0030370.1 MGP_BALBcJ_G0018566.1 mouse_genomes_project 11 69934636 69944767 + MGP_BALBcJ_P0030370 Wscd1 protein_coding protein_coding MGP_BALBcJ_T0030371.1 MGP_BALBcJ_G0018566.1 mouse_genomes_project 11 69935399 69974804 + MGP_BALBcJ_P0030371 Wscd1 protein_coding protein_coding MGP_BALBcJ_T0030372.1 MGP_BALBcJ_G0018566.1 mouse_genomes_project 11 69935694 69974804 + MGP_BALBcJ_P0030372 Wscd1 protein_coding protein_coding MGP_BALBcJ_T0030373.1 MGP_BALBcJ_G0018566.1 mouse_genomes_project 11 69936090 69945623 + Wscd1 protein_coding retained_intron MGP_BALBcJ_T0030374.1 MGP_BALBcJ_G0018566.1 mouse_genomes_project 11 69936090 69974804 + MGP_BALBcJ_P0030374 Wscd1 protein_coding protein_coding MGP_BALBcJ_T0030375.1 MGP_BALBcJ_G0018566.1 mouse_genomes_project 11 69953330 69970442 + Wscd1 protein_coding processed_transcript MGP_BALBcJ_T0027995.1 MGP_BALBcJ_G0017978.1 mouse_genomes_project 11 5960394 5980216 - MGP_BALBcJ_P0027995 Hus1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027996.1 MGP_BALBcJ_G0017978.1 mouse_genomes_project 11 5960394 5980247 - MGP_BALBcJ_P0027996 Hus1 protein_coding protein_coding MGP_BALBcJ_T0027997.1 MGP_BALBcJ_G0017978.1 mouse_genomes_project 11 5962613 5980184 - Hus1 protein_coding retained_intron MGP_BALBcJ_T0027998.1 MGP_BALBcJ_G0017978.1 mouse_genomes_project 11 5964597 5980220 - Hus1 protein_coding retained_intron MGP_BALBcJ_T0027999.1 MGP_BALBcJ_G0017978.1 mouse_genomes_project 11 5967789 5979738 - Hus1 protein_coding retained_intron MGP_BALBcJ_T0028000.1 MGP_BALBcJ_G0017978.1 mouse_genomes_project 11 5975031 5980184 - Hus1 protein_coding processed_transcript MGP_BALBcJ_T0031546.1 MGP_BALBcJ_G0018871.1 mouse_genomes_project 11 87680978 87714943 - MGP_BALBcJ_P0031546 Dgke protein_coding protein_coding MGP_BALBcJ_T0031547.1 MGP_BALBcJ_G0018871.1 mouse_genomes_project 11 87682696 87708874 - MGP_BALBcJ_P0031547 Dgke protein_coding protein_coding MGP_BALBcJ_T0031548.1 MGP_BALBcJ_G0018871.1 mouse_genomes_project 11 87684252 87708874 - MGP_BALBcJ_P0031548 Dgke protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006225.1 MGP_BALBcJ_G0005203.1 mouse_genomes_project 11 59957145 59958967 + Gm12273 lincRNA lincRNA MGP_BALBcJ_T0017146.1 MGP_BALBcJ_G0015106.1 mouse_genomes_project 11 51324941 51327559 - A430108G06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017147.1 MGP_BALBcJ_G0015106.1 mouse_genomes_project 11 51325017 51327567 - A430108G06Rik processed_transcript processed_transcript MGP_BALBcJ_T0009706.1 MGP_BALBcJ_G0007831.1 mouse_genomes_project 11 86343559 86343623 + Mir142 miRNA miRNA MGP_BALBcJ_T0029697.1 MGP_BALBcJ_G0018421.1 mouse_genomes_project 11 64953491 64974564 + MGP_BALBcJ_P0029697 Pirt protein_coding protein_coding MGP_BALBcJ_T0030645.1 MGP_BALBcJ_G0018652.1 mouse_genomes_project 11 73726790 73740278 - MGP_BALBcJ_P0030645 Wdr81 protein_coding protein_coding MGP_BALBcJ_T0030646.1 MGP_BALBcJ_G0018652.1 mouse_genomes_project 11 73726794 73736922 - MGP_BALBcJ_P0030646 Wdr81 protein_coding protein_coding MGP_BALBcJ_T0030647.1 MGP_BALBcJ_G0018652.1 mouse_genomes_project 11 73734011 73735625 - Wdr81 protein_coding processed_transcript MGP_BALBcJ_T0032210.1 MGP_BALBcJ_G0019050.1 mouse_genomes_project 11 98525356 98526340 - MGP_BALBcJ_P0032210 Krtap4-7 protein_coding protein_coding MGP_BALBcJ_T0012529.1 MGP_BALBcJ_G0010626.1 mouse_genomes_project 11 28242145 28242749 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031887.1 MGP_BALBcJ_G0018957.1 mouse_genomes_project 11 95722157 95723546 + Prr15l protein_coding processed_transcript MGP_BALBcJ_T0031888.1 MGP_BALBcJ_G0018957.1 mouse_genomes_project 11 95723355 95729523 + MGP_BALBcJ_P0031888 Prr15l protein_coding protein_coding MGP_BALBcJ_T0031889.1 MGP_BALBcJ_G0018957.1 mouse_genomes_project 11 95723377 95731705 + MGP_BALBcJ_P0031889 Prr15l protein_coding protein_coding MGP_BALBcJ_T0031890.1 MGP_BALBcJ_G0018957.1 mouse_genomes_project 11 95723447 95729518 + MGP_BALBcJ_P0031890 Prr15l protein_coding protein_coding MGP_BALBcJ_T0031891.1 MGP_BALBcJ_G0018957.1 mouse_genomes_project 11 95725292 95729155 + MGP_BALBcJ_P0031891 Prr15l protein_coding protein_coding MGP_BALBcJ_T0006269.1 MGP_BALBcJ_G0005235.1 mouse_genomes_project 11 82346062 82377959 - Gm12576 lincRNA lincRNA MGP_BALBcJ_T0031668.1 MGP_BALBcJ_G0018898.1 mouse_genomes_project 11 93162087 93168282 - Spata20 protein_coding processed_transcript MGP_BALBcJ_T0031669.1 MGP_BALBcJ_G0018898.1 mouse_genomes_project 11 93162087 93168529 - MGP_BALBcJ_P0031669 Spata20 protein_coding protein_coding MGP_BALBcJ_T0031670.1 MGP_BALBcJ_G0018898.1 mouse_genomes_project 11 93166254 93167593 - Spata20 protein_coding processed_transcript MGP_BALBcJ_T0031671.1 MGP_BALBcJ_G0018898.1 mouse_genomes_project 11 93166533 93168280 - Spata20 protein_coding processed_transcript MGP_BALBcJ_T0031672.1 MGP_BALBcJ_G0018898.1 mouse_genomes_project 11 93167788 93169352 - Spata20 protein_coding processed_transcript MGP_BALBcJ_T0032548.1 MGP_BALBcJ_G0019152.1 mouse_genomes_project 11 100650817 100653109 + MGP_BALBcJ_P0032548 Arl4d protein_coding protein_coding MGP_BALBcJ_T0012553.1 MGP_BALBcJ_G0010650.1 mouse_genomes_project 11 41003784 41004468 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030204.1 MGP_BALBcJ_G0018535.1 mouse_genomes_project 11 68611510 68613315 + MGP_BALBcJ_P0030204 Med11 protein_coding protein_coding MGP_BALBcJ_T0030205.1 MGP_BALBcJ_G0018535.1 mouse_genomes_project 11 68611510 68612828 + MGP_BALBcJ_P0030205 Med11 protein_coding protein_coding MGP_BALBcJ_T0030206.1 MGP_BALBcJ_G0018535.1 mouse_genomes_project 11 68611523 68613152 + Med11 protein_coding retained_intron MGP_BALBcJ_T0033209.1 MGP_BALBcJ_G0019288.1 mouse_genomes_project 11 110102575 110165124 + MGP_BALBcJ_P0033209 Kcnj16 protein_coding protein_coding MGP_BALBcJ_T0033210.1 MGP_BALBcJ_G0019288.1 mouse_genomes_project 11 110102575 110165127 + MGP_BALBcJ_P0033210 Kcnj16 protein_coding protein_coding MGP_BALBcJ_T0033211.1 MGP_BALBcJ_G0019288.1 mouse_genomes_project 11 110102606 110162022 + MGP_BALBcJ_P0033211 Kcnj16 protein_coding protein_coding MGP_BALBcJ_T0033212.1 MGP_BALBcJ_G0019288.1 mouse_genomes_project 11 110134366 110165127 + MGP_BALBcJ_P0033212 Kcnj16 protein_coding protein_coding MGP_BALBcJ_T0033213.1 MGP_BALBcJ_G0019288.1 mouse_genomes_project 11 110161062 110161911 + MGP_BALBcJ_P0033213 Kcnj16 protein_coding protein_coding MGP_BALBcJ_T0033214.1 MGP_BALBcJ_G0019288.1 mouse_genomes_project 11 110161062 110165124 + MGP_BALBcJ_P0033214 Kcnj16 protein_coding protein_coding MGP_BALBcJ_T0031357.1 MGP_BALBcJ_G0018826.1 mouse_genomes_project 11 84617603 84757395 - MGP_BALBcJ_P0031357 Brip1 protein_coding protein_coding MGP_BALBcJ_T0031358.1 MGP_BALBcJ_G0018826.1 mouse_genomes_project 11 84751206 84757366 - Brip1 protein_coding processed_transcript MGP_BALBcJ_T0031359.1 MGP_BALBcJ_G0018826.1 mouse_genomes_project 11 84751872 84757368 - Brip1 protein_coding processed_transcript MGP_BALBcJ_T0029811.1 MGP_BALBcJ_G0018450.1 mouse_genomes_project 11 67075887 67080223 + MGP_BALBcJ_P0029811 Slc25a35 protein_coding protein_coding MGP_BALBcJ_T0029812.1 MGP_BALBcJ_G0018450.1 mouse_genomes_project 11 67075903 67079489 + Slc25a35 protein_coding processed_transcript MGP_BALBcJ_T0029813.1 MGP_BALBcJ_G0018450.1 mouse_genomes_project 11 67075904 67083048 + MGP_BALBcJ_P0029813 Slc25a35 protein_coding protein_coding MGP_BALBcJ_T0027985.1 MGP_BALBcJ_G0017974.1 mouse_genomes_project 11 4177077 4181794 + MGP_BALBcJ_P0027985 Igfbp1 protein_coding protein_coding MGP_BALBcJ_T0034010.1 MGP_BALBcJ_G0019447.1 mouse_genomes_project 11 119731335 119739020 + Hgs protein_coding processed_transcript MGP_BALBcJ_T0034011.1 MGP_BALBcJ_G0019447.1 mouse_genomes_project 11 119731335 119741030 + MGP_BALBcJ_P0034011 Hgs protein_coding protein_coding MGP_BALBcJ_T0034012.1 MGP_BALBcJ_G0019447.1 mouse_genomes_project 11 119731335 119747943 + MGP_BALBcJ_P0034012 Hgs protein_coding protein_coding MGP_BALBcJ_T0034013.1 MGP_BALBcJ_G0019447.1 mouse_genomes_project 11 119731335 119747938 + MGP_BALBcJ_P0034013 Hgs protein_coding protein_coding MGP_BALBcJ_T0034014.1 MGP_BALBcJ_G0019447.1 mouse_genomes_project 11 119731335 119747938 + MGP_BALBcJ_P0034014 Hgs protein_coding protein_coding MGP_BALBcJ_T0034015.1 MGP_BALBcJ_G0019447.1 mouse_genomes_project 11 119741212 119743885 + MGP_BALBcJ_P0034015 Hgs protein_coding protein_coding MGP_BALBcJ_T0027945.1 MGP_BALBcJ_G0017965.1 mouse_genomes_project 11 3442060 3450379 - MGP_BALBcJ_P0027945 Purb protein_coding protein_coding MGP_BALBcJ_T0009682.1 MGP_BALBcJ_G0007807.1 mouse_genomes_project 11 68926658 68926751 - Gm22760 miRNA miRNA MGP_BALBcJ_T0009657.1 MGP_BALBcJ_G0007782.1 mouse_genomes_project 11 52463010 52463087 - Gm26116 miRNA miRNA MGP_BALBcJ_T0012755.1 MGP_BALBcJ_G0010852.1 mouse_genomes_project 11 114131326 114131727 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032201.1 MGP_BALBcJ_G0019041.1 mouse_genomes_project 11 98440828 98441128 - MGP_BALBcJ_P0032201 Gm11939 protein_coding protein_coding MGP_BALBcJ_T0033553.1 MGP_BALBcJ_G0019358.1 mouse_genomes_project 11 115369539 115378860 - MGP_BALBcJ_P0033553 Trim65 protein_coding protein_coding MGP_BALBcJ_T0033554.1 MGP_BALBcJ_G0019358.1 mouse_genomes_project 11 115372403 115378864 - Trim65 protein_coding processed_transcript MGP_BALBcJ_T0033555.1 MGP_BALBcJ_G0019358.1 mouse_genomes_project 11 115372403 115378862 - MGP_BALBcJ_P0033555 Trim65 protein_coding protein_coding MGP_BALBcJ_T0009667.1 MGP_BALBcJ_G0007792.1 mouse_genomes_project 11 63754530 63754630 - Mir744 miRNA miRNA MGP_BALBcJ_T0006213.1 MGP_BALBcJ_G0005192.1 mouse_genomes_project 11 49765303 49768553 - 9430098F02Rik lincRNA lincRNA MGP_BALBcJ_T0012670.1 MGP_BALBcJ_G0010767.1 mouse_genomes_project 11 79998399 79999218 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100517.1 MGP_BALBcJ_G0038553.1 mouse_genomes_project 11 67186394 67186529 + Snord118 snoRNA snoRNA MGP_BALBcJ_T0003132.1 MGP_BALBcJ_G0002908.1 mouse_genomes_project 11 43474434 43477779 - Gm16033 antisense antisense MGP_BALBcJ_T0012541.1 MGP_BALBcJ_G0010638.1 mouse_genomes_project 11 35530968 35532115 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012501.1 MGP_BALBcJ_G0010598.1 mouse_genomes_project 11 19678020 19678310 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017193.1 MGP_BALBcJ_G0015130.1 mouse_genomes_project 11 92794833 92817330 + B230206L02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017194.1 MGP_BALBcJ_G0015130.1 mouse_genomes_project 11 92794850 92817330 + B230206L02Rik processed_transcript processed_transcript MGP_BALBcJ_T0017195.1 MGP_BALBcJ_G0015130.1 mouse_genomes_project 11 92797008 92800194 + B230206L02Rik processed_transcript processed_transcript MGP_BALBcJ_T0102141.1 MGP_BALBcJ_G0039958.1 mouse_genomes_project 11 71688227 71688312 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0028074.1 MGP_BALBcJ_G0017993.1 mouse_genomes_project 11 13762457 13907173 + MGP_BALBcJ_P0028074 Egfr protein_coding protein_coding MGP_BALBcJ_T0028075.1 MGP_BALBcJ_G0017993.1 mouse_genomes_project 11 13762465 13937418 + MGP_BALBcJ_P0028075 Egfr protein_coding protein_coding MGP_BALBcJ_T0028076.1 MGP_BALBcJ_G0017993.1 mouse_genomes_project 11 13762484 13803970 + Egfr protein_coding processed_transcript MGP_BALBcJ_T0028077.1 MGP_BALBcJ_G0017993.1 mouse_genomes_project 11 13898231 13903607 + MGP_BALBcJ_P0028077 Egfr protein_coding protein_coding MGP_BALBcJ_T0028078.1 MGP_BALBcJ_G0017993.1 mouse_genomes_project 11 13924484 13930107 + Egfr protein_coding processed_transcript MGP_BALBcJ_T0029161.1 MGP_BALBcJ_G0018279.1 mouse_genomes_project 11 55609075 55618144 + MGP_BALBcJ_P0029161 Sap30l protein_coding protein_coding MGP_BALBcJ_T0100507.1 MGP_BALBcJ_G0038543.1 mouse_genomes_project 11 49374541 49374685 - Gm25291 snoRNA snoRNA MGP_BALBcJ_T0031961.1 MGP_BALBcJ_G0018976.1 mouse_genomes_project 11 96458210 96508531 + MGP_BALBcJ_P0031961 Mllt6 protein_coding protein_coding MGP_BALBcJ_T0031962.1 MGP_BALBcJ_G0018976.1 mouse_genomes_project 11 96474096 96505632 + Mllt6 protein_coding processed_transcript MGP_BALBcJ_T0031963.1 MGP_BALBcJ_G0018976.1 mouse_genomes_project 11 96474096 96508542 + MGP_BALBcJ_P0031963 Mllt6 protein_coding protein_coding MGP_BALBcJ_T0031964.1 MGP_BALBcJ_G0018976.1 mouse_genomes_project 11 96474142 96482710 + Mllt6 protein_coding processed_transcript MGP_BALBcJ_T0031965.1 MGP_BALBcJ_G0018976.1 mouse_genomes_project 11 96485213 96487529 + Mllt6 protein_coding processed_transcript MGP_BALBcJ_T0031966.1 MGP_BALBcJ_G0018976.1 mouse_genomes_project 11 96485213 96487529 + Mllt6 protein_coding processed_transcript MGP_BALBcJ_T0027766.1 MGP_BALBcJ_G0017925.1 mouse_genomes_project 11 1544686 1546481 + MGP_BALBcJ_P0027766 Gm11032 protein_coding protein_coding MGP_BALBcJ_T0009647.1 MGP_BALBcJ_G0007772.1 mouse_genomes_project 11 43500840 43500897 + Mir7239 miRNA miRNA MGP_BALBcJ_T0032008.1 MGP_BALBcJ_G0018985.1 mouse_genomes_project 11 96682738 96684470 - Fbxo47 protein_coding retained_intron MGP_BALBcJ_T0032009.1 MGP_BALBcJ_G0018985.1 mouse_genomes_project 11 96682738 96714436 - MGP_BALBcJ_P0032009 Fbxo47 protein_coding protein_coding MGP_BALBcJ_T0032010.1 MGP_BALBcJ_G0018985.1 mouse_genomes_project 11 96683288 96710226 - MGP_BALBcJ_P0032010 Fbxo47 protein_coding unknown_likely_coding MGP_BALBcJ_T0003161.1 MGP_BALBcJ_G0002934.1 mouse_genomes_project 11 56797106 56798945 + Gm12256 antisense antisense MGP_BALBcJ_T0003290.1 MGP_BALBcJ_G0003037.1 mouse_genomes_project 11 102373599 102378993 + Arhgap27os2 antisense antisense MGP_BALBcJ_T0031871.1 MGP_BALBcJ_G0018955.1 mouse_genomes_project 11 95640659 95642366 + Copz2 protein_coding retained_intron MGP_BALBcJ_T0031872.1 MGP_BALBcJ_G0018955.1 mouse_genomes_project 11 95640665 95652339 + MGP_BALBcJ_P0031872 Copz2 protein_coding protein_coding MGP_BALBcJ_T0031873.1 MGP_BALBcJ_G0018955.1 mouse_genomes_project 11 95640670 95644930 + MGP_BALBcJ_P0031873 Copz2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031874.1 MGP_BALBcJ_G0018955.1 mouse_genomes_project 11 95644676 95648073 + Copz2 protein_coding retained_intron MGP_BALBcJ_T0031875.1 MGP_BALBcJ_G0018955.1 mouse_genomes_project 11 95644907 95652339 + MGP_BALBcJ_P0031875 Copz2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099299.1 MGP_BALBcJ_G0037335.1 mouse_genomes_project 11 105213499 105213643 - Gm25556 snRNA snRNA MGP_BALBcJ_T0030709.1 MGP_BALBcJ_G0018666.1 mouse_genomes_project 11 74326130 74335174 - MGP_BALBcJ_P0030709 Fam101b protein_coding protein_coding MGP_BALBcJ_T0003154.1 MGP_BALBcJ_G0002928.1 mouse_genomes_project 11 53007267 53013081 - Slc36a1os antisense antisense MGP_BALBcJ_T0003155.1 MGP_BALBcJ_G0002928.1 mouse_genomes_project 11 53008492 53013263 - Slc36a1os antisense antisense MGP_BALBcJ_T0100498.1 MGP_BALBcJ_G0038534.1 mouse_genomes_project 11 24409694 24409826 - Gm25387 snoRNA snoRNA MGP_BALBcJ_T0030550.1 MGP_BALBcJ_G0018628.1 mouse_genomes_project 11 72417004 72417471 + MGP_BALBcJ_P0030550 protein_coding protein_coding MGP_BALBcJ_T0102144.1 MGP_BALBcJ_G0039961.1 mouse_genomes_project 11 71942374 71942933 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031239.1 MGP_BALBcJ_G0018801.1 mouse_genomes_project 11 82281310 82311161 + MGP_BALBcJ_P0031239 Heatr6 protein_coding protein_coding MGP_BALBcJ_T0031240.1 MGP_BALBcJ_G0018801.1 mouse_genomes_project 11 82281328 82309428 + Heatr6 protein_coding processed_transcript MGP_BALBcJ_T0031241.1 MGP_BALBcJ_G0018801.1 mouse_genomes_project 11 82281643 82283304 + Heatr6 protein_coding processed_transcript MGP_BALBcJ_T0031242.1 MGP_BALBcJ_G0018801.1 mouse_genomes_project 11 82288174 82292768 + Heatr6 protein_coding retained_intron MGP_BALBcJ_T0031243.1 MGP_BALBcJ_G0018801.1 mouse_genomes_project 11 82301826 82306324 + Heatr6 protein_coding processed_transcript MGP_BALBcJ_T0012540.1 MGP_BALBcJ_G0010637.1 mouse_genomes_project 11 33289494 33290230 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032309.1 MGP_BALBcJ_G0019102.1 mouse_genomes_project 11 99510291 99517116 + MGP_BALBcJ_P0032309 Cnp protein_coding protein_coding MGP_BALBcJ_T0032310.1 MGP_BALBcJ_G0019102.1 mouse_genomes_project 11 99510499 99511838 + Cnp protein_coding processed_transcript MGP_BALBcJ_T0032311.1 MGP_BALBcJ_G0019102.1 mouse_genomes_project 11 99510911 99517116 + Cnp protein_coding processed_transcript MGP_BALBcJ_T0032312.1 MGP_BALBcJ_G0019102.1 mouse_genomes_project 11 99511278 99527049 + Cnp protein_coding processed_transcript MGP_BALBcJ_T0029008.1 MGP_BALBcJ_G0018240.1 mouse_genomes_project 11 51363905 51378035 - Il4 protein_coding processed_transcript MGP_BALBcJ_T0029009.1 MGP_BALBcJ_G0018240.1 mouse_genomes_project 11 51373270 51379480 - MGP_BALBcJ_P0029009 Il4 protein_coding protein_coding MGP_BALBcJ_T0029010.1 MGP_BALBcJ_G0018240.1 mouse_genomes_project 11 51373270 51378149 - MGP_BALBcJ_P0029010 Il4 protein_coding protein_coding MGP_BALBcJ_T0029011.1 MGP_BALBcJ_G0018240.1 mouse_genomes_project 11 51373270 51379163 - MGP_BALBcJ_P0029011 Il4 protein_coding protein_coding MGP_BALBcJ_T0028064.1 MGP_BALBcJ_G0017991.1 mouse_genomes_project 11 13274959 13301737 + MGP_BALBcJ_P0028064 Vstm2a protein_coding protein_coding MGP_BALBcJ_T0028065.1 MGP_BALBcJ_G0017991.1 mouse_genomes_project 11 13275038 13436241 + MGP_BALBcJ_P0028065 Vstm2a protein_coding protein_coding MGP_BALBcJ_T0028066.1 MGP_BALBcJ_G0017991.1 mouse_genomes_project 11 13275276 13299637 + MGP_BALBcJ_P0028066 Vstm2a protein_coding unknown_likely_coding MGP_BALBcJ_T0028279.1 MGP_BALBcJ_G0018043.1 mouse_genomes_project 11 26323096 26356830 + Pnpt1 protein_coding processed_transcript MGP_BALBcJ_T0028280.1 MGP_BALBcJ_G0018043.1 mouse_genomes_project 11 26323100 26328051 + Pnpt1 protein_coding processed_transcript MGP_BALBcJ_T0028281.1 MGP_BALBcJ_G0018043.1 mouse_genomes_project 11 26323100 26356978 + MGP_BALBcJ_P0028281 Pnpt1 protein_coding protein_coding MGP_BALBcJ_T0028282.1 MGP_BALBcJ_G0018043.1 mouse_genomes_project 11 26330662 26337965 + Pnpt1 protein_coding processed_transcript MGP_BALBcJ_T0032089.1 MGP_BALBcJ_G0019006.1 mouse_genomes_project 11 97461858 97466343 - MGP_BALBcJ_P0032089 Gm12355 protein_coding protein_coding MGP_BALBcJ_T0029028.1 MGP_BALBcJ_G0018245.1 mouse_genomes_project 11 51533756 51534969 - MGP_BALBcJ_P0029028 Gm17334 protein_coding protein_coding MGP_BALBcJ_T0028609.1 MGP_BALBcJ_G0018125.1 mouse_genomes_project 11 43185089 43243080 + MGP_BALBcJ_P0028609 Clint1 protein_coding protein_coding MGP_BALBcJ_T0028610.1 MGP_BALBcJ_G0018125.1 mouse_genomes_project 11 43185089 43243080 + MGP_BALBcJ_P0028610 Clint1 protein_coding protein_coding MGP_BALBcJ_T0028611.1 MGP_BALBcJ_G0018125.1 mouse_genomes_project 11 43215584 43243080 + Clint1 protein_coding processed_transcript MGP_BALBcJ_T0003335.1 MGP_BALBcJ_G0003075.1 mouse_genomes_project 11 117693013 117703809 - Gm11747 antisense antisense MGP_BALBcJ_T0031922.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96004103 96079146 - MGP_BALBcJ_P0031922 Npepps protein_coding protein_coding MGP_BALBcJ_T0031923.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96004103 96079081 - MGP_BALBcJ_P0031923 Npepps protein_coding protein_coding MGP_BALBcJ_T0031924.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96004105 96079157 - MGP_BALBcJ_P0031924 Npepps protein_coding protein_coding MGP_BALBcJ_T0031925.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96005168 96010724 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031926.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96005193 96040408 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031927.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96005193 96079031 - MGP_BALBcJ_P0031927 Npepps protein_coding protein_coding MGP_BALBcJ_T0031928.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96005418 96011556 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031929.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96011797 96023389 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031930.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96021730 96030630 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031931.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96023018 96025198 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031932.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96028027 96033451 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031933.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96030350 96040420 - Npepps protein_coding processed_transcript MGP_BALBcJ_T0031934.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96030355 96041325 - MGP_BALBcJ_P0031934 Npepps protein_coding protein_coding MGP_BALBcJ_T0031935.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96033423 96066635 - MGP_BALBcJ_P0031935 Npepps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031936.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96040502 96041688 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031937.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96041175 96079007 - MGP_BALBcJ_P0031937 Npepps protein_coding protein_coding MGP_BALBcJ_T0031938.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96042968 96079069 - MGP_BALBcJ_P0031938 Npepps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031939.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96056259 96079145 - Npepps protein_coding retained_intron MGP_BALBcJ_T0031940.1 MGP_BALBcJ_G0018968.1 mouse_genomes_project 11 96056930 96066627 - MGP_BALBcJ_P0031940 Npepps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009735.1 MGP_BALBcJ_G0007860.1 mouse_genomes_project 11 105832038 105832139 - Gm25994 miRNA miRNA MGP_BALBcJ_T0030566.1 MGP_BALBcJ_G0018636.1 mouse_genomes_project 11 72932018 72939088 + Cluh protein_coding processed_transcript MGP_BALBcJ_T0030567.1 MGP_BALBcJ_G0018636.1 mouse_genomes_project 11 72932038 72952431 + MGP_BALBcJ_P0030567 Cluh protein_coding protein_coding MGP_BALBcJ_T0030568.1 MGP_BALBcJ_G0018636.1 mouse_genomes_project 11 72932038 72953373 + MGP_BALBcJ_P0030568 Cluh protein_coding protein_coding MGP_BALBcJ_T0030569.1 MGP_BALBcJ_G0018636.1 mouse_genomes_project 11 72932063 72953373 + Cluh protein_coding retained_intron MGP_BALBcJ_T0030570.1 MGP_BALBcJ_G0018636.1 mouse_genomes_project 11 72932353 72939876 + Cluh protein_coding processed_transcript MGP_BALBcJ_T0030571.1 MGP_BALBcJ_G0018636.1 mouse_genomes_project 11 72947001 72947828 + Cluh protein_coding retained_intron MGP_BALBcJ_T0006334.1 MGP_BALBcJ_G0005282.1 mouse_genomes_project 11 113597449 113634032 - 4932435O22Rik lincRNA lincRNA MGP_BALBcJ_T0006335.1 MGP_BALBcJ_G0005282.1 mouse_genomes_project 11 113597691 113608697 - 4932435O22Rik lincRNA lincRNA MGP_BALBcJ_T0006308.1 MGP_BALBcJ_G0005262.1 mouse_genomes_project 11 100586391 100586953 + Gm11635 lincRNA lincRNA MGP_BALBcJ_T0006309.1 MGP_BALBcJ_G0005262.1 mouse_genomes_project 11 100586477 100591890 + Gm11635 lincRNA lincRNA MGP_BALBcJ_T0034028.1 MGP_BALBcJ_G0019451.1 mouse_genomes_project 11 119807314 119814119 - Fam195b protein_coding processed_transcript MGP_BALBcJ_T0034029.1 MGP_BALBcJ_G0019451.1 mouse_genomes_project 11 119807314 119814145 - MGP_BALBcJ_P0034029 Fam195b protein_coding protein_coding MGP_BALBcJ_T0029039.1 MGP_BALBcJ_G0018249.1 mouse_genomes_project 11 51767376 51830843 - MGP_BALBcJ_P0029039 Slc22a4 protein_coding protein_coding MGP_BALBcJ_T0029040.1 MGP_BALBcJ_G0018249.1 mouse_genomes_project 11 51776312 51793755 - Slc22a4 protein_coding processed_transcript MGP_BALBcJ_T0029041.1 MGP_BALBcJ_G0018249.1 mouse_genomes_project 11 51800026 51830705 - Slc22a4 protein_coding processed_transcript MGP_BALBcJ_T0033394.1 MGP_BALBcJ_G0019333.1 mouse_genomes_project 11 114719673 114721069 - MGP_BALBcJ_P0033394 Nt5c protein_coding protein_coding MGP_BALBcJ_T0033395.1 MGP_BALBcJ_G0019333.1 mouse_genomes_project 11 114719673 114721116 - MGP_BALBcJ_P0033395 Nt5c protein_coding protein_coding MGP_BALBcJ_T0033396.1 MGP_BALBcJ_G0019333.1 mouse_genomes_project 11 114719891 114721105 - Nt5c protein_coding retained_intron MGP_BALBcJ_T0033397.1 MGP_BALBcJ_G0019333.1 mouse_genomes_project 11 114719953 114720456 - Nt5c protein_coding retained_intron MGP_BALBcJ_T0033398.1 MGP_BALBcJ_G0019333.1 mouse_genomes_project 11 114720024 114720625 - Nt5c protein_coding retained_intron MGP_BALBcJ_T0030274.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68820934 68824537 + MGP_BALBcJ_P0030274 Eno3 protein_coding protein_coding MGP_BALBcJ_T0030275.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68820934 68826268 + MGP_BALBcJ_P0030275 Eno3 protein_coding protein_coding MGP_BALBcJ_T0030276.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68820936 68826268 + MGP_BALBcJ_P0030276 Eno3 protein_coding protein_coding MGP_BALBcJ_T0030277.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68821017 68822150 + MGP_BALBcJ_P0030277 Eno3 protein_coding protein_coding MGP_BALBcJ_T0030278.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68821419 68822179 + MGP_BALBcJ_P0030278 Eno3 protein_coding protein_coding MGP_BALBcJ_T0030279.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68821527 68826265 + MGP_BALBcJ_P0030279 Eno3 protein_coding protein_coding MGP_BALBcJ_T0030280.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68822070 68824576 + Eno3 protein_coding retained_intron MGP_BALBcJ_T0030281.1 MGP_BALBcJ_G0018550.1 mouse_genomes_project 11 68824504 68826019 + MGP_BALBcJ_P0030281 Eno3 protein_coding protein_coding MGP_BALBcJ_T0029213.1 MGP_BALBcJ_G0018299.1 mouse_genomes_project 11 56337189 56381919 - MGP_BALBcJ_P0029213 protein_coding protein_coding MGP_BALBcJ_T0029214.1 MGP_BALBcJ_G0018299.1 mouse_genomes_project 11 56337197 56381949 - MGP_BALBcJ_P0029214 protein_coding protein_coding MGP_BALBcJ_T0029219.1 MGP_BALBcJ_G0018299.1 mouse_genomes_project 11 56378390 56381919 - MGP_BALBcJ_P0029219 protein_coding protein_coding MGP_BALBcJ_T0017140.1 MGP_BALBcJ_G0015102.1 mouse_genomes_project 11 39036391 39284302 + processed_transcript processed_transcript MGP_BALBcJ_T0017141.1 MGP_BALBcJ_G0015102.1 mouse_genomes_project 11 39206876 39288718 + processed_transcript processed_transcript MGP_BALBcJ_T0017142.1 MGP_BALBcJ_G0015102.1 mouse_genomes_project 11 39278473 39286712 + processed_transcript processed_transcript MGP_BALBcJ_T0012636.1 MGP_BALBcJ_G0010733.1 mouse_genomes_project 11 68926625 68926898 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009754.1 MGP_BALBcJ_G0007879.1 mouse_genomes_project 11 120680226 120680286 - Mir7236 miRNA miRNA MGP_BALBcJ_T0012726.1 MGP_BALBcJ_G0010823.1 mouse_genomes_project 11 101676228 101676952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031268.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82666960 82752784 + MGP_BALBcJ_P0031268 Acaca protein_coding protein_coding MGP_BALBcJ_T0031269.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82666988 82670396 + Acaca protein_coding processed_transcript MGP_BALBcJ_T0031271.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82712398 82774080 + Acaca protein_coding retained_intron MGP_BALBcJ_T0031272.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82719070 82770142 + MGP_BALBcJ_P0031272 Acaca protein_coding protein_coding MGP_BALBcJ_T0031273.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82719070 82752689 + MGP_BALBcJ_P0031273 Acaca protein_coding protein_coding MGP_BALBcJ_T0031274.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82719097 82752678 + MGP_BALBcJ_P0031274 Acaca protein_coding protein_coding MGP_BALBcJ_T0031275.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82719272 82937476 + MGP_BALBcJ_P0031275 Acaca protein_coding protein_coding MGP_BALBcJ_T0031276.1 MGP_BALBcJ_G0018807.1 mouse_genomes_project 11 82818851 82846962 + MGP_BALBcJ_P0031276 Acaca protein_coding protein_coding MGP_BALBcJ_T0034202.1 MGP_BALBcJ_G0019486.1 mouse_genomes_project 11 120525925 120544441 + MGP_BALBcJ_P0034202 Narf protein_coding protein_coding MGP_BALBcJ_T0034203.1 MGP_BALBcJ_G0019486.1 mouse_genomes_project 11 120533201 120534112 + Narf protein_coding retained_intron MGP_BALBcJ_T0034204.1 MGP_BALBcJ_G0019486.1 mouse_genomes_project 11 120533683 120534475 + Narf protein_coding retained_intron MGP_BALBcJ_T0012478.1 MGP_BALBcJ_G0010575.1 mouse_genomes_project 11 16360600 16360744 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031006.1 MGP_BALBcJ_G0018729.1 mouse_genomes_project 11 77166232 77167456 - MGP_BALBcJ_P0031006 Fam58b protein_coding protein_coding MGP_BALBcJ_T0028446.1 MGP_BALBcJ_G0018082.1 mouse_genomes_project 11 30376460 30405866 - MGP_BALBcJ_P0028446 Fgf18 protein_coding protein_coding MGP_BALBcJ_T0006146.1 MGP_BALBcJ_G0005134.1 mouse_genomes_project 11 11051258 11167613 - lincRNA lincRNA MGP_BALBcJ_T0012691.1 MGP_BALBcJ_G0010788.1 mouse_genomes_project 11 89182056 89182596 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0027753.1 MGP_BALBcJ_G0017923.1 mouse_genomes_project 11 1267490 1362004 - MGP_BALBcJ_P0027753 Hormad2 protein_coding protein_coding MGP_BALBcJ_T0027754.1 MGP_BALBcJ_G0017923.1 mouse_genomes_project 11 1267490 1362362 - MGP_BALBcJ_P0027754 Hormad2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027755.1 MGP_BALBcJ_G0017923.1 mouse_genomes_project 11 1268059 1362341 - MGP_BALBcJ_P0027755 Hormad2 protein_coding protein_coding MGP_BALBcJ_T0027756.1 MGP_BALBcJ_G0017923.1 mouse_genomes_project 11 1345377 1348572 - Hormad2 protein_coding processed_transcript MGP_BALBcJ_T0027757.1 MGP_BALBcJ_G0017923.1 mouse_genomes_project 11 1345557 1362364 - MGP_BALBcJ_P0027757 Hormad2 protein_coding protein_coding MGP_BALBcJ_T0027758.1 MGP_BALBcJ_G0017923.1 mouse_genomes_project 11 1348623 1357035 - Hormad2 protein_coding processed_transcript MGP_BALBcJ_T0028921.1 MGP_BALBcJ_G0018218.1 mouse_genomes_project 11 49605468 49615193 + MGP_BALBcJ_P0028921 Cdkn2aipnl protein_coding protein_coding MGP_BALBcJ_T0028922.1 MGP_BALBcJ_G0018218.1 mouse_genomes_project 11 49605699 49614103 + MGP_BALBcJ_P0028922 Cdkn2aipnl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006282.1 MGP_BALBcJ_G0005244.1 mouse_genomes_project 11 87357260 87361721 + C030037D09Rik lincRNA lincRNA MGP_BALBcJ_T0006283.1 MGP_BALBcJ_G0005244.1 mouse_genomes_project 11 87357419 87369642 + C030037D09Rik lincRNA lincRNA MGP_BALBcJ_T0006284.1 MGP_BALBcJ_G0005244.1 mouse_genomes_project 11 87359104 87363294 + C030037D09Rik lincRNA lincRNA MGP_BALBcJ_T0034169.1 MGP_BALBcJ_G0019477.1 mouse_genomes_project 11 120327631 120330301 - MGP_BALBcJ_P0034169 Cd7 protein_coding protein_coding MGP_BALBcJ_T0034170.1 MGP_BALBcJ_G0019477.1 mouse_genomes_project 11 120328767 120330301 - Cd7 protein_coding retained_intron MGP_BALBcJ_T0012624.1 MGP_BALBcJ_G0010721.1 mouse_genomes_project 11 66091603 66092276 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029000.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51327632 51362901 + MGP_BALBcJ_P0029000 Kif3a protein_coding protein_coding MGP_BALBcJ_T0029001.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51327632 51362043 + MGP_BALBcJ_P0029001 Kif3a protein_coding protein_coding MGP_BALBcJ_T0029002.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51327650 51362040 + MGP_BALBcJ_P0029002 Kif3a protein_coding protein_coding MGP_BALBcJ_T0029003.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51327779 51361997 + MGP_BALBcJ_P0029003 Kif3a protein_coding protein_coding MGP_BALBcJ_T0029004.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51327969 51339872 + Kif3a protein_coding processed_transcript MGP_BALBcJ_T0029005.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51328114 51340497 + MGP_BALBcJ_P0029005 Kif3a protein_coding protein_coding MGP_BALBcJ_T0029006.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51339856 51347637 + MGP_BALBcJ_P0029006 Kif3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029007.1 MGP_BALBcJ_G0018239.1 mouse_genomes_project 11 51354691 51362238 + MGP_BALBcJ_P0029007 Kif3a protein_coding protein_coding MGP_BALBcJ_T0029755.1 MGP_BALBcJ_G0018438.1 mouse_genomes_project 11 66022237 66269239 + MGP_BALBcJ_P0029755 Stx8 protein_coding protein_coding MGP_BALBcJ_T0029756.1 MGP_BALBcJ_G0018438.1 mouse_genomes_project 11 66022515 66043725 + MGP_BALBcJ_P0029756 Stx8 protein_coding protein_coding MGP_BALBcJ_T0029757.1 MGP_BALBcJ_G0018438.1 mouse_genomes_project 11 66022526 66030685 + MGP_BALBcJ_P0029757 Stx8 protein_coding protein_coding MGP_BALBcJ_T0029758.1 MGP_BALBcJ_G0018438.1 mouse_genomes_project 11 66022536 66266250 + Stx8 protein_coding processed_transcript MGP_BALBcJ_T0029759.1 MGP_BALBcJ_G0018438.1 mouse_genomes_project 11 66022538 66030558 + Stx8 protein_coding processed_transcript MGP_BALBcJ_T0029760.1 MGP_BALBcJ_G0018438.1 mouse_genomes_project 11 66022552 66029734 + Stx8 protein_coding processed_transcript MGP_BALBcJ_T0009713.1 MGP_BALBcJ_G0007838.1 mouse_genomes_project 11 95862365 95862472 + Mir8103 miRNA miRNA MGP_BALBcJ_T0030533.1 MGP_BALBcJ_G0018619.1 mouse_genomes_project 11 72142674 72143724 + MGP_BALBcJ_P0030533 Olfr23 protein_coding protein_coding MGP_BALBcJ_T0027610.1 MGP_BALBcJ_G0017894.1 mouse_genomes_project 11 132936 148926 - MGP_BALBcJ_P0027610 Drg1 protein_coding protein_coding MGP_BALBcJ_T0027611.1 MGP_BALBcJ_G0017894.1 mouse_genomes_project 11 133126 135885 - Drg1 protein_coding retained_intron MGP_BALBcJ_T0027612.1 MGP_BALBcJ_G0017894.1 mouse_genomes_project 11 137436 145069 - Drg1 protein_coding retained_intron MGP_BALBcJ_T0027613.1 MGP_BALBcJ_G0017894.1 mouse_genomes_project 11 139420 148925 - Drg1 protein_coding processed_transcript MGP_BALBcJ_T0027614.1 MGP_BALBcJ_G0017894.1 mouse_genomes_project 11 140593 148948 - Drg1 protein_coding retained_intron MGP_BALBcJ_T0027615.1 MGP_BALBcJ_G0017894.1 mouse_genomes_project 11 142190 148926 - MGP_BALBcJ_P0027615 Drg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0032832.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102349328 102378801 - MGP_BALBcJ_P0032832 Arhgap27 protein_coding protein_coding MGP_BALBcJ_T0032833.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102349329 102381551 - Arhgap27 protein_coding retained_intron MGP_BALBcJ_T0032834.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102349331 102362510 - MGP_BALBcJ_P0032834 Arhgap27 protein_coding protein_coding MGP_BALBcJ_T0032835.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102350997 102351910 - Arhgap27 protein_coding retained_intron MGP_BALBcJ_T0032836.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102351060 102351227 - Arhgap27 protein_coding processed_transcript MGP_BALBcJ_T0032837.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102351296 102351889 - Arhgap27 protein_coding retained_intron MGP_BALBcJ_T0032838.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102353067 102357515 - Arhgap27 protein_coding retained_intron MGP_BALBcJ_T0032839.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102355576 102357099 - Arhgap27 protein_coding retained_intron MGP_BALBcJ_T0032840.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102357024 102374260 - MGP_BALBcJ_P0032840 Arhgap27 protein_coding protein_coding MGP_BALBcJ_T0032841.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102357927 102374274 - MGP_BALBcJ_P0032841 Arhgap27 protein_coding protein_coding MGP_BALBcJ_T0032842.1 MGP_BALBcJ_G0019204.1 mouse_genomes_project 11 102377639 102381323 - MGP_BALBcJ_P0032842 Arhgap27 protein_coding protein_coding MGP_BALBcJ_T0006170.1 MGP_BALBcJ_G0005157.1 mouse_genomes_project 11 21973837 21996589 - Gm12665 lincRNA lincRNA MGP_BALBcJ_T0006171.1 MGP_BALBcJ_G0005157.1 mouse_genomes_project 11 21973837 21996581 - Gm12665 lincRNA lincRNA MGP_BALBcJ_T0006345.1 MGP_BALBcJ_G0005289.1 mouse_genomes_project 11 116646158 116647138 + Gm11729 lincRNA lincRNA MGP_BALBcJ_T0017249.1 MGP_BALBcJ_G0015160.1 mouse_genomes_project 11 119410497 119412246 + Gm11769 processed_transcript processed_transcript MGP_BALBcJ_T0017129.1 MGP_BALBcJ_G0015094.1 mouse_genomes_project 11 19899615 19902723 + Gm20456 processed_transcript processed_transcript MGP_BALBcJ_T0030282.1 MGP_BALBcJ_G0018551.1 mouse_genomes_project 11 68827525 68833170 - MGP_BALBcJ_P0030282 Spag7 protein_coding protein_coding MGP_BALBcJ_T0030283.1 MGP_BALBcJ_G0018551.1 mouse_genomes_project 11 68827757 68832972 - Spag7 protein_coding retained_intron MGP_BALBcJ_T0030284.1 MGP_BALBcJ_G0018551.1 mouse_genomes_project 11 68828094 68833033 - Spag7 protein_coding retained_intron MGP_BALBcJ_T0030285.1 MGP_BALBcJ_G0018551.1 mouse_genomes_project 11 68828153 68833044 - MGP_BALBcJ_P0030285 Spag7 protein_coding protein_coding MGP_BALBcJ_T0029774.1 MGP_BALBcJ_G0018442.1 mouse_genomes_project 11 66621145 66623205 + MGP_BALBcJ_P0029774 Mfsd6l protein_coding protein_coding MGP_BALBcJ_T0012714.1 MGP_BALBcJ_G0010811.1 mouse_genomes_project 11 98666584 98666752 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009649.1 MGP_BALBcJ_G0007774.1 mouse_genomes_project 11 47446056 47446171 + Gm23492 miRNA miRNA MGP_BALBcJ_T0012770.1 MGP_BALBcJ_G0010867.1 mouse_genomes_project 11 121202645 121203072 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012514.1 MGP_BALBcJ_G0010611.1 mouse_genomes_project 11 25192640 25195723 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017189.1 MGP_BALBcJ_G0015128.1 mouse_genomes_project 11 83376973 83378664 + 4930502E09Rik processed_transcript processed_transcript MGP_BALBcJ_T0027719.1 MGP_BALBcJ_G0017914.1 mouse_genomes_project 11 1002496 1006462 - MGP_BALBcJ_P0027719 Mtfp1 protein_coding protein_coding MGP_BALBcJ_T0027720.1 MGP_BALBcJ_G0017914.1 mouse_genomes_project 11 1005450 1006157 - Mtfp1 protein_coding processed_transcript MGP_BALBcJ_T0012730.1 MGP_BALBcJ_G0010827.1 mouse_genomes_project 11 103501712 103502124 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028571.1 MGP_BALBcJ_G0018115.1 mouse_genomes_project 11 40864578 40921959 + MGP_BALBcJ_P0028571 Ccnjl protein_coding protein_coding MGP_BALBcJ_T0028572.1 MGP_BALBcJ_G0018115.1 mouse_genomes_project 11 40865040 40892125 + Ccnjl protein_coding processed_transcript MGP_BALBcJ_T0028601.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41983389 42374787 + MGP_BALBcJ_P0028601 Ebf1 protein_coding protein_coding MGP_BALBcJ_T0028602.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41983389 42375321 + MGP_BALBcJ_P0028602 Ebf1 protein_coding protein_coding MGP_BALBcJ_T0028603.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41983389 42377885 + MGP_BALBcJ_P0028603 Ebf1 protein_coding protein_coding MGP_BALBcJ_T0028604.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41984493 42013251 + Ebf1 protein_coding processed_transcript MGP_BALBcJ_T0028605.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41984556 42009862 + Ebf1 protein_coding processed_transcript MGP_BALBcJ_T0028606.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41984598 42374540 + MGP_BALBcJ_P0028606 Ebf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0028607.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 41988156 42009852 + Ebf1 protein_coding processed_transcript MGP_BALBcJ_T0028608.1 MGP_BALBcJ_G0018124.1 mouse_genomes_project 11 42281901 42342845 + Ebf1 protein_coding processed_transcript MGP_BALBcJ_T0012489.1 MGP_BALBcJ_G0010586.1 mouse_genomes_project 11 18141167 18141461 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032575.1 MGP_BALBcJ_G0019158.1 mouse_genomes_project 11 100979590 100987541 + MGP_BALBcJ_P0032575 1700006E09Rik protein_coding protein_coding MGP_BALBcJ_T0032576.1 MGP_BALBcJ_G0019158.1 mouse_genomes_project 11 100979595 100986135 + MGP_BALBcJ_P0032576 1700006E09Rik protein_coding protein_coding MGP_BALBcJ_T0032577.1 MGP_BALBcJ_G0019158.1 mouse_genomes_project 11 100982364 100987549 + MGP_BALBcJ_P0032577 1700006E09Rik protein_coding protein_coding MGP_BALBcJ_T0030972.1 MGP_BALBcJ_G0018719.1 mouse_genomes_project 11 76770224 76795341 - MGP_BALBcJ_P0030972 Slc13a2 protein_coding protein_coding MGP_BALBcJ_T0017215.1 MGP_BALBcJ_G0015144.1 mouse_genomes_project 11 99279342 99280536 - Gm20394 processed_transcript processed_transcript MGP_BALBcJ_T0030002.1 MGP_BALBcJ_G0018492.1 mouse_genomes_project 11 67901867 67903946 - MGP_BALBcJ_P0030002 Slc35g3 protein_coding protein_coding MGP_BALBcJ_T0030189.1 MGP_BALBcJ_G0018532.1 mouse_genomes_project 11 68499556 68507420 - MGP_BALBcJ_P0030189 Alox15 protein_coding protein_coding MGP_BALBcJ_T0030190.1 MGP_BALBcJ_G0018532.1 mouse_genomes_project 11 68500009 68501101 - Alox15 protein_coding processed_transcript MGP_BALBcJ_T0032869.1 MGP_BALBcJ_G0019214.1 mouse_genomes_project 11 103140486 103183808 + MGP_BALBcJ_P0032869 Crhr1 protein_coding protein_coding MGP_BALBcJ_T0027675.1 MGP_BALBcJ_G0017903.1 mouse_genomes_project 11 541712 582587 + MGP_BALBcJ_P0027675 Morc2a protein_coding protein_coding MGP_BALBcJ_T0027676.1 MGP_BALBcJ_G0017903.1 mouse_genomes_project 11 541977 561634 + MGP_BALBcJ_P0027676 Morc2a protein_coding protein_coding MGP_BALBcJ_T0027677.1 MGP_BALBcJ_G0017903.1 mouse_genomes_project 11 542471 582693 + MGP_BALBcJ_P0027677 Morc2a protein_coding protein_coding MGP_BALBcJ_T0027678.1 MGP_BALBcJ_G0017903.1 mouse_genomes_project 11 572130 576124 + Morc2a protein_coding processed_transcript MGP_BALBcJ_T0027679.1 MGP_BALBcJ_G0017903.1 mouse_genomes_project 11 572490 573369 + Morc2a protein_coding processed_transcript MGP_BALBcJ_T0027680.1 MGP_BALBcJ_G0017903.1 mouse_genomes_project 11 572585 575906 + Morc2a protein_coding processed_transcript MGP_BALBcJ_T0006238.1 MGP_BALBcJ_G0005213.1 mouse_genomes_project 11 68818510 68820226 - Gm12319 lincRNA lincRNA MGP_BALBcJ_T0009696.1 MGP_BALBcJ_G0007821.1 mouse_genomes_project 11 76546831 76546892 + Mir7653 miRNA miRNA MGP_BALBcJ_T0033428.1 MGP_BALBcJ_G0019338.1 mouse_genomes_project 11 114838883 114842983 + MGP_BALBcJ_P0033428 Mrps7 protein_coding protein_coding MGP_BALBcJ_T0033429.1 MGP_BALBcJ_G0019338.1 mouse_genomes_project 11 114839825 114841959 + Mrps7 protein_coding processed_transcript MGP_BALBcJ_T0029280.1 MGP_BALBcJ_G0018331.1 mouse_genomes_project 11 57118209 57121629 + MGP_BALBcJ_P0029280 Mrpl55 protein_coding protein_coding MGP_BALBcJ_T0029281.1 MGP_BALBcJ_G0018331.1 mouse_genomes_project 11 57118212 57121590 + MGP_BALBcJ_P0029281 Mrpl55 protein_coding protein_coding MGP_BALBcJ_T0029282.1 MGP_BALBcJ_G0018331.1 mouse_genomes_project 11 57118215 57121836 + MGP_BALBcJ_P0029282 Mrpl55 protein_coding protein_coding MGP_BALBcJ_T0029283.1 MGP_BALBcJ_G0018331.1 mouse_genomes_project 11 57118228 57121704 + MGP_BALBcJ_P0029283 Mrpl55 protein_coding protein_coding MGP_BALBcJ_T0029284.1 MGP_BALBcJ_G0018331.1 mouse_genomes_project 11 57118261 57121590 + MGP_BALBcJ_P0029284 Mrpl55 protein_coding protein_coding MGP_BALBcJ_T0011283.1 MGP_BALBcJ_G0009408.1 mouse_genomes_project 11 71002432 71002624 - Gm22075 misc_RNA misc_RNA MGP_BALBcJ_T0012622.1 MGP_BALBcJ_G0010719.1 mouse_genomes_project 11 63192201 63192793 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028168.1 MGP_BALBcJ_G0018018.1 mouse_genomes_project 11 19569424 19576807 + MGP_BALBcJ_P0028168 Tmem17 protein_coding protein_coding MGP_BALBcJ_T0009721.1 MGP_BALBcJ_G0007846.1 mouse_genomes_project 11 97099756 97099813 + Mir5119 miRNA miRNA MGP_BALBcJ_T0098456.1 MGP_BALBcJ_G0036510.1 mouse_genomes_project 11 24161379 24161461 + n-R5s68 rRNA rRNA MGP_BALBcJ_T0029304.1 MGP_BALBcJ_G0018340.1 mouse_genomes_project 11 57409527 57426664 - MGP_BALBcJ_P0029304 Zkscan17 protein_coding protein_coding MGP_BALBcJ_T0029305.1 MGP_BALBcJ_G0018340.1 mouse_genomes_project 11 57421999 57428676 - Zkscan17 protein_coding processed_transcript MGP_BALBcJ_T0029306.1 MGP_BALBcJ_G0018340.1 mouse_genomes_project 11 57426622 57449137 - Zkscan17 protein_coding processed_transcript MGP_BALBcJ_T0029307.1 MGP_BALBcJ_G0018340.1 mouse_genomes_project 11 57426628 57428676 - Zkscan17 protein_coding processed_transcript MGP_BALBcJ_T0029308.1 MGP_BALBcJ_G0018340.1 mouse_genomes_project 11 57447957 57449257 - Zkscan17 protein_coding processed_transcript MGP_BALBcJ_T0029303.1 MGP_BALBcJ_G0018339.1 mouse_genomes_project 11 57383561 57394853 - MGP_BALBcJ_P0029303 Zfp867 protein_coding protein_coding MGP_BALBcJ_T0100483.1 MGP_BALBcJ_G0038519.1 mouse_genomes_project 11 3531573 3531662 - Gm24000 snoRNA snoRNA MGP_BALBcJ_T0012524.1 MGP_BALBcJ_G0010621.1 mouse_genomes_project 11 27796582 27797078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031829.1 MGP_BALBcJ_G0018945.1 mouse_genomes_project 11 95076807 95085853 + MGP_BALBcJ_P0031829 Hoxb6 protein_coding protein_coding MGP_BALBcJ_T0031830.1 MGP_BALBcJ_G0018945.1 mouse_genomes_project 11 95083464 95085852 + MGP_BALBcJ_P0031830 Hoxb6 protein_coding protein_coding MGP_BALBcJ_T0099286.1 MGP_BALBcJ_G0037322.1 mouse_genomes_project 11 94848000 94848184 - Gm22423 snRNA snRNA MGP_BALBcJ_T0098829.1 MGP_BALBcJ_G0036880.1 mouse_genomes_project 11 118440594 118441158 - Gm11753 sense_intronic sense_intronic MGP_BALBcJ_T0101849.1 MGP_BALBcJ_G0039767.1 mouse_genomes_project 11 81439707 81520872 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101850.1 MGP_BALBcJ_G0039767.1 mouse_genomes_project 11 81440043 81511741 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0032827.1 MGP_BALBcJ_G0019202.1 mouse_genomes_project 11 102223623 102233929 - MGP_BALBcJ_P0032827 Spata32 protein_coding protein_coding MGP_BALBcJ_T0009734.1 MGP_BALBcJ_G0007859.1 mouse_genomes_project 11 105831560 105831627 - Mir3064 miRNA miRNA MGP_BALBcJ_T0033615.1 MGP_BALBcJ_G0019370.1 mouse_genomes_project 11 115683636 115687638 + MGP_BALBcJ_P0033615 protein_coding protein_coding MGP_BALBcJ_T0033749.1 MGP_BALBcJ_G0019395.1 mouse_genomes_project 11 117052582 117083030 + MGP_BALBcJ_P0033749 Gm20708 protein_coding protein_coding MGP_BALBcJ_T0032222.1 MGP_BALBcJ_G0019062.1 mouse_genomes_project 11 98745450 98747430 - MGP_BALBcJ_P0032222 Gm11564 protein_coding protein_coding MGP_BALBcJ_T0011775.1 MGP_BALBcJ_G0009897.1 mouse_genomes_project 11 57536463 57537723 + MGP_BALBcJ_P0011775 Olfr225 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0032140.1 MGP_BALBcJ_G0019018.1 mouse_genomes_project 11 97717390 97745804 + MGP_BALBcJ_P0032140 Wipf2 protein_coding protein_coding MGP_BALBcJ_T0032141.1 MGP_BALBcJ_G0019018.1 mouse_genomes_project 11 97717390 97758808 + MGP_BALBcJ_P0032141 Wipf2 protein_coding protein_coding MGP_BALBcJ_T0032142.1 MGP_BALBcJ_G0019018.1 mouse_genomes_project 11 97717851 97746345 + Wipf2 protein_coding retained_intron MGP_BALBcJ_T0032143.1 MGP_BALBcJ_G0019018.1 mouse_genomes_project 11 97744677 97745602 + Wipf2 protein_coding retained_intron MGP_BALBcJ_T0028097.1 MGP_BALBcJ_G0018001.1 mouse_genomes_project 11 14975396 14990151 - MGP_BALBcJ_P0028097 Etaa1 protein_coding protein_coding MGP_BALBcJ_T0030117.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68163873 68169099 - MGP_BALBcJ_P0030117 Acadvl protein_coding protein_coding MGP_BALBcJ_T0030118.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68163879 68164602 - Acadvl protein_coding retained_intron MGP_BALBcJ_T0030119.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68163934 68169078 - MGP_BALBcJ_P0030119 Acadvl protein_coding protein_coding MGP_BALBcJ_T0030120.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68164912 68166265 - Acadvl protein_coding retained_intron MGP_BALBcJ_T0030121.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68166879 68169068 - Acadvl protein_coding retained_intron MGP_BALBcJ_T0030122.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68167733 68169102 - Acadvl protein_coding retained_intron MGP_BALBcJ_T0030123.1 MGP_BALBcJ_G0018518.1 mouse_genomes_project 11 68167808 68169090 - Acadvl protein_coding retained_intron MGP_BALBcJ_T0032148.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97781486 97828997 + MGP_BALBcJ_P0032148 Rara protein_coding protein_coding MGP_BALBcJ_T0032149.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97791394 97828997 + MGP_BALBcJ_P0032149 Rara protein_coding protein_coding MGP_BALBcJ_T0032150.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97791414 97829777 + MGP_BALBcJ_P0032150 Rara protein_coding protein_coding MGP_BALBcJ_T0032151.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97792024 97804058 + Rara protein_coding processed_transcript MGP_BALBcJ_T0032152.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97793407 97829777 + MGP_BALBcJ_P0032152 Rara protein_coding protein_coding MGP_BALBcJ_T0032153.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97793408 97804187 + Rara protein_coding processed_transcript MGP_BALBcJ_T0032154.1 MGP_BALBcJ_G0019020.1 mouse_genomes_project 11 97814312 97829777 + MGP_BALBcJ_P0032154 Rara protein_coding protein_coding MGP_BALBcJ_T0032815.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102185899 102214446 + MGP_BALBcJ_P0032815 Fmnl1 protein_coding protein_coding MGP_BALBcJ_T0032816.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102186105 102214440 + MGP_BALBcJ_P0032816 Fmnl1 protein_coding protein_coding MGP_BALBcJ_T0032817.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102186105 102214453 + MGP_BALBcJ_P0032817 Fmnl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0032818.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102195538 102205903 + Fmnl1 protein_coding processed_transcript MGP_BALBcJ_T0032819.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102200504 102206193 + Fmnl1 protein_coding processed_transcript MGP_BALBcJ_T0032820.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102207854 102214440 + Fmnl1 protein_coding retained_intron MGP_BALBcJ_T0032821.1 MGP_BALBcJ_G0019200.1 mouse_genomes_project 11 102212343 102213419 + MGP_BALBcJ_P0032821 Fmnl1 protein_coding protein_coding MGP_BALBcJ_T0099266.1 MGP_BALBcJ_G0037302.1 mouse_genomes_project 11 75295141 75295291 + Gm22611 snRNA snRNA MGP_BALBcJ_T0098818.1 MGP_BALBcJ_G0036871.1 mouse_genomes_project 11 53299350 53299474 + Gm12238 sense_intronic sense_intronic MGP_BALBcJ_T0006159.1 MGP_BALBcJ_G0005146.1 mouse_genomes_project 11 19650590 19661753 - Gm26829 lincRNA lincRNA MGP_BALBcJ_T0011282.1 MGP_BALBcJ_G0009407.1 mouse_genomes_project 11 70524498 70524769 + Gm23224 misc_RNA misc_RNA MGP_BALBcJ_T0029288.1 MGP_BALBcJ_G0018335.1 mouse_genomes_project 11 57226243 57252746 + MGP_BALBcJ_P0029288 Wnt9a protein_coding protein_coding MGP_BALBcJ_T0029289.1 MGP_BALBcJ_G0018335.1 mouse_genomes_project 11 57226245 57252746 + MGP_BALBcJ_P0029289 Wnt9a protein_coding protein_coding MGP_BALBcJ_T0009724.1 MGP_BALBcJ_G0007849.1 mouse_genomes_project 11 99981769 99981839 + Mir6928 miRNA miRNA MGP_BALBcJ_T0032197.1 MGP_BALBcJ_G0019038.1 mouse_genomes_project 11 98418785 98425003 - MGP_BALBcJ_P0032197 Krt40 protein_coding protein_coding MGP_BALBcJ_T0032198.1 MGP_BALBcJ_G0019038.1 mouse_genomes_project 11 98418785 98425003 - MGP_BALBcJ_P0032198 Krt40 protein_coding protein_coding MGP_BALBcJ_T0012606.1 MGP_BALBcJ_G0010703.1 mouse_genomes_project 11 58380406 58380848 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003330.1 MGP_BALBcJ_G0003070.1 mouse_genomes_project 11 116484075 116489864 - Gm16045 antisense antisense MGP_BALBcJ_T0032590.1 MGP_BALBcJ_G0019161.1 mouse_genomes_project 11 101053176 101084587 - MGP_BALBcJ_P0032590 Mpp2 protein_coding protein_coding MGP_BALBcJ_T0032591.1 MGP_BALBcJ_G0019161.1 mouse_genomes_project 11 101053685 101078580 - MGP_BALBcJ_P0032591 Mpp2 protein_coding protein_coding MGP_BALBcJ_T0032592.1 MGP_BALBcJ_G0019161.1 mouse_genomes_project 11 101058234 101078515 - Mpp2 protein_coding processed_transcript MGP_BALBcJ_T0032593.1 MGP_BALBcJ_G0019161.1 mouse_genomes_project 11 101060815 101081832 - Mpp2 protein_coding retained_intron MGP_BALBcJ_T0032594.1 MGP_BALBcJ_G0019161.1 mouse_genomes_project 11 101076747 101084539 - Mpp2 protein_coding processed_transcript MGP_BALBcJ_T0032595.1 MGP_BALBcJ_G0019161.1 mouse_genomes_project 11 101076801 101084527 - Mpp2 protein_coding processed_transcript MGP_BALBcJ_T0030361.1 MGP_BALBcJ_G0018563.1 mouse_genomes_project 11 69185837 69191403 + MGP_BALBcJ_P0030361 Mis12 protein_coding protein_coding MGP_BALBcJ_T0030362.1 MGP_BALBcJ_G0018563.1 mouse_genomes_project 11 69185837 69193596 + MGP_BALBcJ_P0030362 Mis12 protein_coding protein_coding MGP_BALBcJ_T0030363.1 MGP_BALBcJ_G0018563.1 mouse_genomes_project 11 69185837 69192291 + MGP_BALBcJ_P0030363 Mis12 protein_coding protein_coding MGP_BALBcJ_T0030364.1 MGP_BALBcJ_G0018563.1 mouse_genomes_project 11 69186085 69191392 + MGP_BALBcJ_P0030364 Mis12 protein_coding protein_coding MGP_BALBcJ_T0030365.1 MGP_BALBcJ_G0018563.1 mouse_genomes_project 11 69186088 69191383 + MGP_BALBcJ_P0030365 Mis12 protein_coding protein_coding MGP_BALBcJ_T0030366.1 MGP_BALBcJ_G0018563.1 mouse_genomes_project 11 69186117 69191420 + MGP_BALBcJ_P0030366 Mis12 protein_coding protein_coding MGP_BALBcJ_T0099280.1 MGP_BALBcJ_G0037316.1 mouse_genomes_project 11 86280653 86280753 - Gm25968 snRNA snRNA MGP_BALBcJ_T0032917.1 MGP_BALBcJ_G0019224.1 mouse_genomes_project 11 104165613 104165982 + MGP_BALBcJ_P0032917 Gm10842 protein_coding protein_coding MGP_BALBcJ_T0033008.1 MGP_BALBcJ_G0019248.1 mouse_genomes_project 11 105399576 105409141 + MGP_BALBcJ_P0033008 Prr29 protein_coding protein_coding MGP_BALBcJ_T0033009.1 MGP_BALBcJ_G0019248.1 mouse_genomes_project 11 105406852 105409123 + MGP_BALBcJ_P0033009 Prr29 protein_coding protein_coding MGP_BALBcJ_T0033010.1 MGP_BALBcJ_G0019248.1 mouse_genomes_project 11 105406871 105409269 + MGP_BALBcJ_P0033010 Prr29 protein_coding protein_coding MGP_BALBcJ_T0033011.1 MGP_BALBcJ_G0019248.1 mouse_genomes_project 11 105406871 105409184 + MGP_BALBcJ_P0033011 Prr29 protein_coding protein_coding MGP_BALBcJ_T0033012.1 MGP_BALBcJ_G0019248.1 mouse_genomes_project 11 105406871 105409375 + MGP_BALBcJ_P0033012 Prr29 protein_coding protein_coding MGP_BALBcJ_T0033013.1 MGP_BALBcJ_G0019248.1 mouse_genomes_project 11 105406871 105409585 + MGP_BALBcJ_P0033013 Prr29 protein_coding protein_coding MGP_BALBcJ_T0029452.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59121199 59143923 + MGP_BALBcJ_P0029452 Tnfrsf13b protein_coding protein_coding MGP_BALBcJ_T0029453.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59121202 59141422 + MGP_BALBcJ_P0029453 Tnfrsf13b protein_coding protein_coding MGP_BALBcJ_T0029454.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59121233 59141465 + MGP_BALBcJ_P0029454 Tnfrsf13b protein_coding protein_coding MGP_BALBcJ_T0029455.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59135401 59142193 + MGP_BALBcJ_P0029455 Tnfrsf13b protein_coding protein_coding MGP_BALBcJ_T0029456.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59137031 59142484 + Tnfrsf13b protein_coding processed_transcript MGP_BALBcJ_T0029457.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59137069 59142357 + Tnfrsf13b protein_coding processed_transcript MGP_BALBcJ_T0029458.1 MGP_BALBcJ_G0018372.1 mouse_genomes_project 11 59137235 59142310 + Tnfrsf13b protein_coding processed_transcript MGP_BALBcJ_T0012440.1 MGP_BALBcJ_G0010537.1 mouse_genomes_project 11 3131284 3131640 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006342.1 MGP_BALBcJ_G0005288.1 mouse_genomes_project 11 116296234 116298400 + Snhg20 lincRNA lincRNA MGP_BALBcJ_T0006343.1 MGP_BALBcJ_G0005288.1 mouse_genomes_project 11 116296234 116296902 + Snhg20 lincRNA lincRNA MGP_BALBcJ_T0006344.1 MGP_BALBcJ_G0005288.1 mouse_genomes_project 11 116296246 116298399 + Snhg20 lincRNA lincRNA MGP_BALBcJ_T0012583.1 MGP_BALBcJ_G0010680.1 mouse_genomes_project 11 52001810 52002070 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099231.1 MGP_BALBcJ_G0037267.1 mouse_genomes_project 11 12443086 12443193 + Gm24707 snRNA snRNA MGP_BALBcJ_T0032213.1 MGP_BALBcJ_G0019053.1 mouse_genomes_project 11 98547796 98548719 - MGP_BALBcJ_P0032213 Krtap4-6 protein_coding protein_coding MGP_BALBcJ_T0032736.1 MGP_BALBcJ_G0019184.1 mouse_genomes_project 11 101702002 101715356 - MGP_BALBcJ_P0032736 Ccdc43 protein_coding protein_coding MGP_BALBcJ_T0032737.1 MGP_BALBcJ_G0019184.1 mouse_genomes_project 11 101702004 101715308 - MGP_BALBcJ_P0032737 Ccdc43 protein_coding protein_coding MGP_BALBcJ_T0032738.1 MGP_BALBcJ_G0019184.1 mouse_genomes_project 11 101703666 101715110 - Ccdc43 protein_coding processed_transcript MGP_BALBcJ_T0032739.1 MGP_BALBcJ_G0019184.1 mouse_genomes_project 11 101705937 101715308 - Ccdc43 protein_coding processed_transcript MGP_BALBcJ_T0032740.1 MGP_BALBcJ_G0019184.1 mouse_genomes_project 11 101707333 101715244 - Ccdc43 protein_coding processed_transcript MGP_BALBcJ_T0030399.1 MGP_BALBcJ_G0018573.1 mouse_genomes_project 11 70398949 70403101 - MGP_BALBcJ_P0030399 Med31 protein_coding protein_coding MGP_BALBcJ_T0030400.1 MGP_BALBcJ_G0018573.1 mouse_genomes_project 11 70400433 70402562 - Med31 protein_coding retained_intron MGP_BALBcJ_T0012552.1 MGP_BALBcJ_G0010649.1 mouse_genomes_project 11 40950115 40951316 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0030448.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 70998371 71054495 + Zzef1 protein_coding retained_intron MGP_BALBcJ_T0030449.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 70998371 71130683 + MGP_BALBcJ_P0030449 Zzef1 protein_coding protein_coding MGP_BALBcJ_T0030450.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 70998399 71130681 + MGP_BALBcJ_P0030450 Zzef1 protein_coding protein_coding MGP_BALBcJ_T0030451.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 70998442 71128281 + MGP_BALBcJ_P0030451 Zzef1 protein_coding unknown_likely_coding MGP_BALBcJ_T0030452.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 71045732 71053860 + Zzef1 protein_coding processed_transcript MGP_BALBcJ_T0030453.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 71115871 71129374 + Zzef1 protein_coding retained_intron MGP_BALBcJ_T0030454.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 71118518 71122460 + Zzef1 protein_coding retained_intron MGP_BALBcJ_T0030455.1 MGP_BALBcJ_G0018586.1 mouse_genomes_project 11 71124406 71130683 + Zzef1 protein_coding retained_intron MGP_BALBcJ_T0100497.1 MGP_BALBcJ_G0038533.1 mouse_genomes_project 11 24163270 24163389 - Gm24850 snoRNA snoRNA MGP_BALBcJ_T0029949.1 MGP_BALBcJ_G0018482.1 mouse_genomes_project 11 67758713 67779034 + MGP_BALBcJ_P0029949 Fxr2 protein_coding protein_coding MGP_BALBcJ_T0029950.1 MGP_BALBcJ_G0018482.1 mouse_genomes_project 11 67765859 67767118 + Fxr2 protein_coding processed_transcript MGP_BALBcJ_T0029951.1 MGP_BALBcJ_G0018482.1 mouse_genomes_project 11 67769252 67775496 + Fxr2 protein_coding processed_transcript MGP_BALBcJ_T0029952.1 MGP_BALBcJ_G0018482.1 mouse_genomes_project 11 67775299 67776776 + Fxr2 protein_coding processed_transcript MGP_BALBcJ_T0029953.1 MGP_BALBcJ_G0018482.1 mouse_genomes_project 11 67776823 67777417 + Fxr2 protein_coding processed_transcript MGP_BALBcJ_T0029954.1 MGP_BALBcJ_G0018482.1 mouse_genomes_project 11 67778056 67778660 + Fxr2 protein_coding processed_transcript MGP_BALBcJ_T0012531.1 MGP_BALBcJ_G0010628.1 mouse_genomes_project 11 29426141 29426838 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098741.1 MGP_BALBcJ_G0036795.1 mouse_genomes_project 11 115411234 115411360 - Gm26413 scaRNA scaRNA MGP_BALBcJ_T0031725.1 MGP_BALBcJ_G0018914.1 mouse_genomes_project 11 93722201 93738065 + MGP_BALBcJ_P0031725 Ppp1r9b protein_coding protein_coding MGP_BALBcJ_T0031726.1 MGP_BALBcJ_G0018914.1 mouse_genomes_project 11 93724046 93732493 + Ppp1r9b protein_coding processed_transcript MGP_BALBcJ_T0031727.1 MGP_BALBcJ_G0018914.1 mouse_genomes_project 11 93727230 93738065 + MGP_BALBcJ_P0031727 Ppp1r9b protein_coding protein_coding MGP_BALBcJ_T0100510.1 MGP_BALBcJ_G0038546.1 mouse_genomes_project 11 54301874 54301970 + Gm22603 snoRNA snoRNA MGP_BALBcJ_T0033107.1 MGP_BALBcJ_G0019266.1 mouse_genomes_project 11 106956012 106993284 - MGP_BALBcJ_P0033107 Cacng5 protein_coding protein_coding MGP_BALBcJ_T0033108.1 MGP_BALBcJ_G0019266.1 mouse_genomes_project 11 106956078 106996988 - MGP_BALBcJ_P0033108 Cacng5 protein_coding protein_coding MGP_BALBcJ_T0000833.1 MGP_BALBcJ_G0000765.1 mouse_genomes_project 11 13069023 13069640 + TEC TEC MGP_BALBcJ_T0006287.1 MGP_BALBcJ_G0005247.1 mouse_genomes_project 11 87774252 87776539 - Gm11497 lincRNA lincRNA MGP_BALBcJ_T0031509.1 MGP_BALBcJ_G0018861.1 mouse_genomes_project 11 86691033 86707490 + MGP_BALBcJ_P0031509 Vezf1 protein_coding protein_coding MGP_BALBcJ_T0031510.1 MGP_BALBcJ_G0018861.1 mouse_genomes_project 11 86696341 86707490 + MGP_BALBcJ_P0031510 Vezf1 protein_coding protein_coding MGP_BALBcJ_T0003282.1 MGP_BALBcJ_G0003029.1 mouse_genomes_project 11 100879266 100884236 + Gm11551 antisense antisense MGP_BALBcJ_T0031905.1 MGP_BALBcJ_G0018963.1 mouse_genomes_project 11 95839791 95847445 + MGP_BALBcJ_P0031905 Mrpl10 protein_coding protein_coding MGP_BALBcJ_T0031906.1 MGP_BALBcJ_G0018963.1 mouse_genomes_project 11 95839826 95846750 + MGP_BALBcJ_P0031906 Mrpl10 protein_coding protein_coding MGP_BALBcJ_T0032487.1 MGP_BALBcJ_G0019139.1 mouse_genomes_project 11 100323658 100334466 + MGP_BALBcJ_P0032487 G6pc protein_coding protein_coding MGP_BALBcJ_T0030014.1 MGP_BALBcJ_G0018495.1 mouse_genomes_project 11 67942723 67950029 - MGP_BALBcJ_P0030014 Fgf11 protein_coding protein_coding MGP_BALBcJ_T0030015.1 MGP_BALBcJ_G0018495.1 mouse_genomes_project 11 67942728 67950170 - MGP_BALBcJ_P0030015 Fgf11 protein_coding protein_coding MGP_BALBcJ_T0100500.1 MGP_BALBcJ_G0038536.1 mouse_genomes_project 11 32131585 32131712 - Gm22022 snoRNA snoRNA MGP_BALBcJ_T0006191.1 MGP_BALBcJ_G0005172.1 mouse_genomes_project 11 32165817 32168010 + Gm12711 lincRNA lincRNA MGP_BALBcJ_T0009718.1 MGP_BALBcJ_G0007843.1 mouse_genomes_project 11 96773858 96773928 - Gm22461 miRNA miRNA MGP_BALBcJ_T0031129.1 MGP_BALBcJ_G0018763.1 mouse_genomes_project 11 80494630 80499691 + MGP_BALBcJ_P0031129 Ccl11 protein_coding protein_coding MGP_BALBcJ_T0100524.1 MGP_BALBcJ_G0038560.1 mouse_genomes_project 11 73182611 73182704 + Snord91a snoRNA snoRNA MGP_BALBcJ_T0009716.1 MGP_BALBcJ_G0007841.1 mouse_genomes_project 11 96486218 96486289 + Mir6927 miRNA miRNA MGP_BALBcJ_T0029644.1 MGP_BALBcJ_G0018405.1 mouse_genomes_project 11 60904371 60920094 + MGP_BALBcJ_P0029644 Tvp23b protein_coding protein_coding MGP_BALBcJ_T0029645.1 MGP_BALBcJ_G0018405.1 mouse_genomes_project 11 60904406 60916961 + Tvp23b protein_coding processed_transcript MGP_BALBcJ_T0029646.1 MGP_BALBcJ_G0018405.1 mouse_genomes_project 11 60904530 60910263 + Tvp23b protein_coding processed_transcript MGP_BALBcJ_T0029647.1 MGP_BALBcJ_G0018405.1 mouse_genomes_project 11 60908578 60940681 + Tvp23b protein_coding processed_transcript MGP_BALBcJ_T0029710.1 MGP_BALBcJ_G0018425.1 mouse_genomes_project 11 65118549 65143049 + MGP_BALBcJ_P0029710 Myh3 protein_coding protein_coding MGP_BALBcJ_T0029711.1 MGP_BALBcJ_G0018425.1 mouse_genomes_project 11 65118549 65143049 + MGP_BALBcJ_P0029711 Myh3 protein_coding protein_coding MGP_BALBcJ_T0029712.1 MGP_BALBcJ_G0018425.1 mouse_genomes_project 11 65118549 65143044 + MGP_BALBcJ_P0029712 Myh3 protein_coding protein_coding MGP_BALBcJ_T0031712.1 MGP_BALBcJ_G0018910.1 mouse_genomes_project 11 93460782 93466657 - MGP_BALBcJ_P0031712 Tmem92 protein_coding protein_coding MGP_BALBcJ_T0031713.1 MGP_BALBcJ_G0018910.1 mouse_genomes_project 11 93461329 93532634 - MGP_BALBcJ_P0031713 Tmem92 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031714.1 MGP_BALBcJ_G0018910.1 mouse_genomes_project 11 93461329 93466464 - MGP_BALBcJ_P0031714 Tmem92 protein_coding protein_coding MGP_BALBcJ_T0028790.1 MGP_BALBcJ_G0018182.1 mouse_genomes_project 11 47762631 47782994 + MGP_BALBcJ_P0028790 Mgat4b protein_coding protein_coding MGP_BALBcJ_T0028791.1 MGP_BALBcJ_G0018182.1 mouse_genomes_project 11 47777229 47787006 + MGP_BALBcJ_P0028791 Mgat4b protein_coding protein_coding MGP_BALBcJ_T0028792.1 MGP_BALBcJ_G0018182.1 mouse_genomes_project 11 47782634 47787006 + MGP_BALBcJ_P0028792 Mgat4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028793.1 MGP_BALBcJ_G0018182.1 mouse_genomes_project 11 47782642 47783670 + Mgat4b protein_coding retained_intron MGP_BALBcJ_T0028794.1 MGP_BALBcJ_G0018182.1 mouse_genomes_project 11 47785925 47786820 + Mgat4b protein_coding retained_intron MGP_BALBcJ_T0028853.1 MGP_BALBcJ_G0018196.1 mouse_genomes_project 11 48512494 48515549 - MGP_BALBcJ_P0028853 4933414I15Rik protein_coding protein_coding MGP_BALBcJ_T0028854.1 MGP_BALBcJ_G0018196.1 mouse_genomes_project 11 48513481 48515525 - 4933414I15Rik protein_coding processed_transcript MGP_BALBcJ_T0099263.1 MGP_BALBcJ_G0037299.1 mouse_genomes_project 11 71968474 71968581 + Gm22381 snRNA snRNA MGP_BALBcJ_T0032229.1 MGP_BALBcJ_G0019069.1 mouse_genomes_project 11 98822234 98827477 + MGP_BALBcJ_P0032229 Krtap31-1 protein_coding protein_coding MGP_BALBcJ_T0028374.1 MGP_BALBcJ_G0018063.1 mouse_genomes_project 11 28589299 28602093 - MGP_BALBcJ_P0028374 Stc2 protein_coding protein_coding MGP_BALBcJ_T0028375.1 MGP_BALBcJ_G0018063.1 mouse_genomes_project 11 28589980 28601122 - Stc2 protein_coding processed_transcript MGP_BALBcJ_T0028376.1 MGP_BALBcJ_G0018063.1 mouse_genomes_project 11 28597469 28600185 - Stc2 protein_coding processed_transcript MGP_BALBcJ_T0028377.1 MGP_BALBcJ_G0018063.1 mouse_genomes_project 11 28600017 28602066 - Stc2 protein_coding processed_transcript MGP_BALBcJ_T0028378.1 MGP_BALBcJ_G0018063.1 mouse_genomes_project 11 28600021 28601075 - Stc2 protein_coding processed_transcript MGP_BALBcJ_T0030971.1 MGP_BALBcJ_G0018718.1 mouse_genomes_project 11 76730439 76759728 - MGP_BALBcJ_P0030971 Foxn1 protein_coding protein_coding MGP_BALBcJ_T0003157.1 MGP_BALBcJ_G0002930.1 mouse_genomes_project 11 53587005 53898468 + antisense antisense MGP_BALBcJ_T0006224.1 MGP_BALBcJ_G0005202.1 mouse_genomes_project 11 59869755 59871920 + Gm26964 lincRNA lincRNA MGP_BALBcJ_T0031858.1 MGP_BALBcJ_G0018953.1 mouse_genomes_project 11 95577543 95593092 + MGP_BALBcJ_P0031858 Cbx1 protein_coding protein_coding MGP_BALBcJ_T0031859.1 MGP_BALBcJ_G0018953.1 mouse_genomes_project 11 95577553 95597234 + MGP_BALBcJ_P0031859 Cbx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031860.1 MGP_BALBcJ_G0018953.1 mouse_genomes_project 11 95577575 95597726 + MGP_BALBcJ_P0031860 Cbx1 protein_coding protein_coding MGP_BALBcJ_T0031861.1 MGP_BALBcJ_G0018953.1 mouse_genomes_project 11 95577591 95590468 + Cbx1 protein_coding retained_intron MGP_BALBcJ_T0031862.1 MGP_BALBcJ_G0018953.1 mouse_genomes_project 11 95577665 95597626 + MGP_BALBcJ_P0031862 Cbx1 protein_coding protein_coding MGP_BALBcJ_T0029216.1 MGP_BALBcJ_G0018301.1 mouse_genomes_project 11 56377222 56383355 - MGP_BALBcJ_P0029216 protein_coding protein_coding MGP_BALBcJ_T0029217.1 MGP_BALBcJ_G0018301.1 mouse_genomes_project 11 56377222 56381942 - MGP_BALBcJ_P0029217 protein_coding protein_coding MGP_BALBcJ_T0029218.1 MGP_BALBcJ_G0018301.1 mouse_genomes_project 11 56378306 56382634 - MGP_BALBcJ_P0029218 protein_coding protein_coding MGP_BALBcJ_T0030516.1 MGP_BALBcJ_G0018608.1 mouse_genomes_project 11 71721932 71722871 - MGP_BALBcJ_P0030516 Olfr382 protein_coding protein_coding MGP_BALBcJ_T0029656.1 MGP_BALBcJ_G0018410.1 mouse_genomes_project 11 61985173 62102888 - MGP_BALBcJ_P0029656 Cox10 protein_coding protein_coding MGP_BALBcJ_T0029657.1 MGP_BALBcJ_G0018410.1 mouse_genomes_project 11 62094787 62102890 - Cox10 protein_coding processed_transcript MGP_BALBcJ_T0009751.1 MGP_BALBcJ_G0007876.1 mouse_genomes_project 11 119537344 119537482 + miRNA miRNA MGP_BALBcJ_T0033084.1 MGP_BALBcJ_G0019260.1 mouse_genomes_project 11 106217492 106242599 - MGP_BALBcJ_P0033084 Nol11 protein_coding protein_coding MGP_BALBcJ_T0033085.1 MGP_BALBcJ_G0019260.1 mouse_genomes_project 11 106217492 106242599 - MGP_BALBcJ_P0033085 Nol11 protein_coding protein_coding MGP_BALBcJ_T0033086.1 MGP_BALBcJ_G0019260.1 mouse_genomes_project 11 106218189 106219263 - Nol11 protein_coding processed_transcript MGP_BALBcJ_T0033087.1 MGP_BALBcJ_G0019260.1 mouse_genomes_project 11 106229345 106238039 - Nol11 protein_coding processed_transcript MGP_BALBcJ_T0033088.1 MGP_BALBcJ_G0019260.1 mouse_genomes_project 11 106239757 106242570 - Nol11 protein_coding processed_transcript MGP_BALBcJ_T0017098.1 MGP_BALBcJ_G0015082.1 mouse_genomes_project 11 191158 216874 - Gm12592 processed_transcript processed_transcript MGP_BALBcJ_T0098460.1 MGP_BALBcJ_G0036514.1 mouse_genomes_project 11 66109904 66110030 + Gm26157 rRNA rRNA MGP_BALBcJ_T0012494.1 MGP_BALBcJ_G0010591.1 mouse_genomes_project 11 18499542 18499755 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031337.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 83907279 84064700 + MGP_BALBcJ_P0031337 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031338.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 83907280 84382804 + MGP_BALBcJ_P0031338 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031339.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 83907297 83925474 + MGP_BALBcJ_P0031339 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031340.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 83907324 84382095 + MGP_BALBcJ_P0031340 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031341.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 83907324 84382095 + MGP_BALBcJ_P0031341 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031342.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84019987 84382803 + MGP_BALBcJ_P0031342 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031343.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84024580 84050815 + MGP_BALBcJ_P0031343 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031344.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84046389 84049736 + Bcas3 protein_coding processed_transcript MGP_BALBcJ_T0031345.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84063335 84382803 + MGP_BALBcJ_P0031345 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031346.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84063346 84382803 + MGP_BALBcJ_P0031346 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031347.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84136235 84158151 + Bcas3 protein_coding processed_transcript MGP_BALBcJ_T0031348.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84195696 84382800 + Bcas3 protein_coding processed_transcript MGP_BALBcJ_T0031349.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84357369 84382135 + MGP_BALBcJ_P0031349 Bcas3 protein_coding protein_coding MGP_BALBcJ_T0031350.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84378157 84382391 + Bcas3 protein_coding processed_transcript MGP_BALBcJ_T0031351.1 MGP_BALBcJ_G0018822.1 mouse_genomes_project 11 84378710 84382052 + Bcas3 protein_coding processed_transcript MGP_BALBcJ_T0028454.1 MGP_BALBcJ_G0018085.1 mouse_genomes_project 11 30474264 30780697 - MGP_BALBcJ_P0028454 Ranbp17 protein_coding protein_coding MGP_BALBcJ_T0028455.1 MGP_BALBcJ_G0018085.1 mouse_genomes_project 11 30475871 30604014 - MGP_BALBcJ_P0028455 Ranbp17 protein_coding unknown_likely_coding MGP_BALBcJ_T0028458.1 MGP_BALBcJ_G0018085.1 mouse_genomes_project 11 30560724 30780593 - MGP_BALBcJ_P0028458 Ranbp17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028459.1 MGP_BALBcJ_G0018085.1 mouse_genomes_project 11 30567095 30594444 - Ranbp17 protein_coding processed_transcript MGP_BALBcJ_T0028460.1 MGP_BALBcJ_G0018085.1 mouse_genomes_project 11 30738467 30780581 - MGP_BALBcJ_P0028460 Ranbp17 protein_coding protein_coding MGP_BALBcJ_T0028461.1 MGP_BALBcJ_G0018085.1 mouse_genomes_project 11 30752704 30780045 - MGP_BALBcJ_P0028461 Ranbp17 protein_coding protein_coding MGP_BALBcJ_T0012575.1 MGP_BALBcJ_G0010672.1 mouse_genomes_project 11 51099999 51100387 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029221.1 MGP_BALBcJ_G0018303.1 mouse_genomes_project 11 56439196 56440318 + MGP_BALBcJ_P0029221 Olfr324 protein_coding protein_coding MGP_BALBcJ_T0027943.1 MGP_BALBcJ_G0017964.1 mouse_genomes_project 11 3402505 3420276 - MGP_BALBcJ_P0027943 H2afv protein_coding protein_coding MGP_BALBcJ_T0027944.1 MGP_BALBcJ_G0017964.1 mouse_genomes_project 11 3403414 3420185 - MGP_BALBcJ_P0027944 H2afv protein_coding protein_coding MGP_BALBcJ_T0028909.1 MGP_BALBcJ_G0018214.1 mouse_genomes_project 11 49312254 49315745 - MGP_BALBcJ_P0028909 0610009B22Rik protein_coding protein_coding MGP_BALBcJ_T0028910.1 MGP_BALBcJ_G0018214.1 mouse_genomes_project 11 49312254 49315524 - MGP_BALBcJ_P0028910 0610009B22Rik protein_coding protein_coding MGP_BALBcJ_T0028174.1 MGP_BALBcJ_G0018022.1 mouse_genomes_project 11 19956468 20042866 - MGP_BALBcJ_P0028174 protein_coding protein_coding MGP_BALBcJ_T0028175.1 MGP_BALBcJ_G0018022.1 mouse_genomes_project 11 19960091 20042736 - MGP_BALBcJ_P0028175 protein_coding protein_coding MGP_BALBcJ_T0028176.1 MGP_BALBcJ_G0018022.1 mouse_genomes_project 11 19960096 20039480 - MGP_BALBcJ_P0028176 protein_coding protein_coding MGP_BALBcJ_T0028177.1 MGP_BALBcJ_G0018022.1 mouse_genomes_project 11 19960167 20017337 - protein_coding retained_intron MGP_BALBcJ_T0028178.1 MGP_BALBcJ_G0018022.1 mouse_genomes_project 11 19960355 20033372 - protein_coding processed_transcript MGP_BALBcJ_T0028179.1 MGP_BALBcJ_G0018022.1 mouse_genomes_project 11 20016541 20042668 - MGP_BALBcJ_P0028179 protein_coding protein_coding MGP_BALBcJ_T0009688.1 MGP_BALBcJ_G0007813.1 mouse_genomes_project 11 73456924 73456990 + Mir132 miRNA miRNA MGP_BALBcJ_T0032175.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98069280 98090540 - MGP_BALBcJ_P0032175 Smarce1 protein_coding unknown_likely_coding MGP_BALBcJ_T0032176.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98069288 98090887 - MGP_BALBcJ_P0032176 Smarce1 protein_coding protein_coding MGP_BALBcJ_T0032177.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98070236 98073295 - Smarce1 protein_coding processed_transcript MGP_BALBcJ_T0032178.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98079072 98080685 - Smarce1 protein_coding processed_transcript MGP_BALBcJ_T0032179.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98079481 98090315 - Smarce1 protein_coding processed_transcript MGP_BALBcJ_T0032180.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98079561 98090283 - Smarce1 protein_coding processed_transcript MGP_BALBcJ_T0032181.1 MGP_BALBcJ_G0019026.1 mouse_genomes_project 11 98085161 98090316 - Smarce1 protein_coding processed_transcript MGP_BALBcJ_T0003224.1 MGP_BALBcJ_G0002987.1 mouse_genomes_project 11 81225823 81227265 - Gm11423 antisense antisense MGP_BALBcJ_T0003225.1 MGP_BALBcJ_G0002987.1 mouse_genomes_project 11 81226053 81227265 - Gm11423 antisense antisense MGP_BALBcJ_T0006253.1 MGP_BALBcJ_G0005225.1 mouse_genomes_project 11 74934464 74942200 + Gm26780 lincRNA lincRNA MGP_BALBcJ_T0029166.1 MGP_BALBcJ_G0018282.1 mouse_genomes_project 11 55835263 55887828 + MGP_BALBcJ_P0029166 Larp1 protein_coding protein_coding MGP_BALBcJ_T0029167.1 MGP_BALBcJ_G0018282.1 mouse_genomes_project 11 55835263 55887831 + MGP_BALBcJ_P0029167 Larp1 protein_coding protein_coding MGP_BALBcJ_T0029168.1 MGP_BALBcJ_G0018282.1 mouse_genomes_project 11 55867024 55868424 + Larp1 protein_coding retained_intron MGP_BALBcJ_T0003146.1 MGP_BALBcJ_G0002921.1 mouse_genomes_project 11 51221193 51222428 - Gm12212 antisense antisense MGP_BALBcJ_T0028119.1 MGP_BALBcJ_G0018008.1 mouse_genomes_project 11 17585583 17695192 + MGP_BALBcJ_P0028119 Sertad2 protein_coding protein_coding MGP_BALBcJ_T0028120.1 MGP_BALBcJ_G0018008.1 mouse_genomes_project 11 17674165 17695192 + MGP_BALBcJ_P0028120 Sertad2 protein_coding protein_coding MGP_BALBcJ_T0028121.1 MGP_BALBcJ_G0018008.1 mouse_genomes_project 11 17689325 17691236 + MGP_BALBcJ_P0028121 Sertad2 protein_coding protein_coding MGP_BALBcJ_T0029104.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719863 52765441 - MGP_BALBcJ_P0029104 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029105.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719865 52765423 - Tnip1 protein_coding processed_transcript MGP_BALBcJ_T0029106.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719865 52772233 - MGP_BALBcJ_P0029106 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029107.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719865 52772229 - MGP_BALBcJ_P0029107 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029108.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719865 52772234 - MGP_BALBcJ_P0029108 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029109.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719865 52772227 - MGP_BALBcJ_P0029109 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029110.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52719867 52772226 - MGP_BALBcJ_P0029110 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029111.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52727689 52730154 - Tnip1 protein_coding retained_intron MGP_BALBcJ_T0029112.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52735778 52765441 - MGP_BALBcJ_P0029112 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029113.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52743087 52765366 - MGP_BALBcJ_P0029113 Tnip1 protein_coding protein_coding MGP_BALBcJ_T0029114.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52749941 52765406 - Tnip1 protein_coding processed_transcript MGP_BALBcJ_T0029115.1 MGP_BALBcJ_G0018262.1 mouse_genomes_project 11 52749995 52772226 - Tnip1 protein_coding processed_transcript MGP_BALBcJ_T0032011.1 MGP_BALBcJ_G0018986.1 mouse_genomes_project 11 96754924 96817828 - MGP_BALBcJ_P0032011 Plxdc1 protein_coding protein_coding MGP_BALBcJ_T0032012.1 MGP_BALBcJ_G0018986.1 mouse_genomes_project 11 96755342 96817783 - MGP_BALBcJ_P0032012 Plxdc1 protein_coding protein_coding MGP_BALBcJ_T0032013.1 MGP_BALBcJ_G0018986.1 mouse_genomes_project 11 96769020 96817817 - Plxdc1 protein_coding processed_transcript MGP_BALBcJ_T0032014.1 MGP_BALBcJ_G0018986.1 mouse_genomes_project 11 96809974 96817814 - MGP_BALBcJ_P0032014 Plxdc1 protein_coding protein_coding MGP_BALBcJ_T0030909.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76544715 76548485 + MGP_BALBcJ_P0030909 Tlcd1 protein_coding protein_coding MGP_BALBcJ_T0030910.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76546134 76547627 + MGP_BALBcJ_P0030910 Tlcd1 protein_coding protein_coding MGP_BALBcJ_T0030911.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76546153 76548159 + Tlcd1 protein_coding processed_transcript MGP_BALBcJ_T0030912.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76546655 76549914 + MGP_BALBcJ_P0030912 Tlcd1 protein_coding protein_coding MGP_BALBcJ_T0030913.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76546689 76548825 + MGP_BALBcJ_P0030913 Tlcd1 protein_coding protein_coding MGP_BALBcJ_T0030914.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76546735 76547612 + Tlcd1 protein_coding retained_intron MGP_BALBcJ_T0030915.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76546766 76547880 + MGP_BALBcJ_P0030915 Tlcd1 protein_coding protein_coding MGP_BALBcJ_T0030916.1 MGP_BALBcJ_G0018706.1 mouse_genomes_project 11 76547277 76548096 + Tlcd1 protein_coding retained_intron MGP_BALBcJ_T0030617.1 MGP_BALBcJ_G0018646.1 mouse_genomes_project 11 73460880 73474159 - MGP_BALBcJ_P0030617 Dph1 protein_coding protein_coding MGP_BALBcJ_T0030618.1 MGP_BALBcJ_G0018646.1 mouse_genomes_project 11 73460933 73466534 - Dph1 protein_coding retained_intron MGP_BALBcJ_T0030620.1 MGP_BALBcJ_G0018646.1 mouse_genomes_project 11 73461533 73464535 - Dph1 protein_coding processed_transcript MGP_BALBcJ_T0030621.1 MGP_BALBcJ_G0018646.1 mouse_genomes_project 11 73462426 73466726 - Dph1 protein_coding processed_transcript MGP_BALBcJ_T0030622.1 MGP_BALBcJ_G0018646.1 mouse_genomes_project 11 73464047 73474881 - MGP_BALBcJ_P0030622 Dph1 protein_coding protein_coding MGP_BALBcJ_T0003308.1 MGP_BALBcJ_G0003053.1 mouse_genomes_project 11 107076065 107076746 + Gm11657 antisense antisense MGP_BALBcJ_T0033525.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115277848 115308590 + MGP_BALBcJ_P0033525 Unk protein_coding protein_coding MGP_BALBcJ_T0033526.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115277848 115308590 + MGP_BALBcJ_P0033526 Unk protein_coding protein_coding MGP_BALBcJ_T0033527.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115277849 115288578 + Unk protein_coding processed_transcript MGP_BALBcJ_T0033528.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115286184 115308590 + Unk protein_coding processed_transcript MGP_BALBcJ_T0033529.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115296670 115301054 + Unk protein_coding retained_intron MGP_BALBcJ_T0033530.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115300670 115303443 + Unk protein_coding retained_intron MGP_BALBcJ_T0033531.1 MGP_BALBcJ_G0019354.1 mouse_genomes_project 11 115303273 115306482 + Unk protein_coding retained_intron MGP_BALBcJ_T0027800.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1916702 1972856 + MGP_BALBcJ_P0027800 Ap1b1 protein_coding protein_coding MGP_BALBcJ_T0027801.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1916702 1972794 + MGP_BALBcJ_P0027801 Ap1b1 protein_coding protein_coding MGP_BALBcJ_T0027802.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1916790 1946596 + Ap1b1 protein_coding processed_transcript MGP_BALBcJ_T0027803.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1916812 1947706 + Ap1b1 protein_coding processed_transcript MGP_BALBcJ_T0027804.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1939732 1946596 + Ap1b1 protein_coding processed_transcript MGP_BALBcJ_T0027805.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1939788 1972794 + MGP_BALBcJ_P0027805 Ap1b1 protein_coding protein_coding MGP_BALBcJ_T0027806.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1961040 1962855 + Ap1b1 protein_coding processed_transcript MGP_BALBcJ_T0027807.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1967433 1970467 + Ap1b1 protein_coding processed_transcript MGP_BALBcJ_T0027808.1 MGP_BALBcJ_G0017934.1 mouse_genomes_project 11 1968828 1970486 + Ap1b1 protein_coding processed_transcript MGP_BALBcJ_T0006208.1 MGP_BALBcJ_G0005188.1 mouse_genomes_project 11 47788911 47840938 + Gm26542 lincRNA lincRNA MGP_BALBcJ_T0028965.1 MGP_BALBcJ_G0018228.1 mouse_genomes_project 11 51077593 51086688 + MGP_BALBcJ_P0028965 Zcchc10 protein_coding protein_coding MGP_BALBcJ_T0028966.1 MGP_BALBcJ_G0018228.1 mouse_genomes_project 11 51080314 51085866 + MGP_BALBcJ_P0028966 Zcchc10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003231.1 MGP_BALBcJ_G0002991.1 mouse_genomes_project 11 84322373 84331197 - Bcas3os2 antisense antisense MGP_BALBcJ_T0028388.1 MGP_BALBcJ_G0018068.1 mouse_genomes_project 11 29428787 29441961 - MGP_BALBcJ_P0028388 Il9r protein_coding protein_coding MGP_BALBcJ_T0028389.1 MGP_BALBcJ_G0018068.1 mouse_genomes_project 11 29430241 29442018 - MGP_BALBcJ_P0028389 Il9r protein_coding nonsense_mediated_decay MGP_BALBcJ_T0028390.1 MGP_BALBcJ_G0018068.1 mouse_genomes_project 11 29431508 29441975 - MGP_BALBcJ_P0028390 Il9r protein_coding protein_coding MGP_BALBcJ_T0028391.1 MGP_BALBcJ_G0018068.1 mouse_genomes_project 11 29431725 29441961 - MGP_BALBcJ_P0028391 Il9r protein_coding protein_coding MGP_BALBcJ_T0028392.1 MGP_BALBcJ_G0018068.1 mouse_genomes_project 11 29435802 29442018 - Il9r protein_coding retained_intron MGP_BALBcJ_T0012545.1 MGP_BALBcJ_G0010642.1 mouse_genomes_project 11 37872611 37873077 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029946.1 MGP_BALBcJ_G0018481.1 mouse_genomes_project 11 67746638 67748485 + MGP_BALBcJ_P0029946 Sat2 protein_coding protein_coding MGP_BALBcJ_T0029947.1 MGP_BALBcJ_G0018481.1 mouse_genomes_project 11 67746666 67748073 + Sat2 protein_coding retained_intron MGP_BALBcJ_T0029948.1 MGP_BALBcJ_G0018481.1 mouse_genomes_project 11 67746666 67748485 + MGP_BALBcJ_P0029948 Sat2 protein_coding protein_coding MGP_BALBcJ_T0028706.1 MGP_BALBcJ_G0018159.1 mouse_genomes_project 11 46620744 46621683 + MGP_BALBcJ_P0028706 Olfr1394 protein_coding protein_coding MGP_BALBcJ_T0031277.1 MGP_BALBcJ_G0018809.1 mouse_genomes_project 11 82958748 83051572 - MGP_BALBcJ_P0031277 Aatf protein_coding protein_coding MGP_BALBcJ_T0031278.1 MGP_BALBcJ_G0018809.1 mouse_genomes_project 11 82958776 83027399 - Aatf protein_coding processed_transcript MGP_BALBcJ_T0031279.1 MGP_BALBcJ_G0018809.1 mouse_genomes_project 11 82978360 82985390 - Aatf protein_coding retained_intron MGP_BALBcJ_T0031280.1 MGP_BALBcJ_G0018809.1 mouse_genomes_project 11 83003010 83051572 - Aatf protein_coding retained_intron MGP_BALBcJ_T0033585.1 MGP_BALBcJ_G0019363.1 mouse_genomes_project 11 115471617 115490044 - MGP_BALBcJ_P0033585 Evpl protein_coding protein_coding MGP_BALBcJ_T0030300.1 MGP_BALBcJ_G0018554.1 mouse_genomes_project 11 68864712 68896328 + MGP_BALBcJ_P0030300 Kif1c protein_coding protein_coding MGP_BALBcJ_T0030301.1 MGP_BALBcJ_G0018554.1 mouse_genomes_project 11 68864712 68872056 + MGP_BALBcJ_P0030301 Kif1c protein_coding protein_coding MGP_BALBcJ_T0030302.1 MGP_BALBcJ_G0018554.1 mouse_genomes_project 11 68864725 68894740 + MGP_BALBcJ_P0030302 Kif1c protein_coding protein_coding MGP_BALBcJ_T0030303.1 MGP_BALBcJ_G0018554.1 mouse_genomes_project 11 68864740 68894777 + MGP_BALBcJ_P0030303 Kif1c protein_coding protein_coding MGP_BALBcJ_T0030304.1 MGP_BALBcJ_G0018554.1 mouse_genomes_project 11 68864814 68896328 + MGP_BALBcJ_P0030304 Kif1c protein_coding protein_coding MGP_BALBcJ_T0032205.1 MGP_BALBcJ_G0019045.1 mouse_genomes_project 11 98471260 98472139 - MGP_BALBcJ_P0032205 Krtap1-3 protein_coding protein_coding MGP_BALBcJ_T0030185.1 MGP_BALBcJ_G0018531.1 mouse_genomes_project 11 68470350 68477377 - MGP_BALBcJ_P0030185 Alox12e protein_coding protein_coding MGP_BALBcJ_T0030186.1 MGP_BALBcJ_G0018531.1 mouse_genomes_project 11 68474719 68476326 - Alox12e protein_coding retained_intron MGP_BALBcJ_T0030187.1 MGP_BALBcJ_G0018531.1 mouse_genomes_project 11 68475742 68476603 - Alox12e protein_coding retained_intron MGP_BALBcJ_T0030188.1 MGP_BALBcJ_G0018531.1 mouse_genomes_project 11 68475803 68477197 - Alox12e protein_coding retained_intron MGP_BALBcJ_T0006227.1 MGP_BALBcJ_G0005205.1 mouse_genomes_project 11 61198906 61213711 + B430319H21Rik lincRNA lincRNA MGP_BALBcJ_T0017217.1 MGP_BALBcJ_G0015146.1 mouse_genomes_project 11 102280598 102283483 - 1700028N14Rik processed_transcript processed_transcript MGP_BALBcJ_T0003336.1 MGP_BALBcJ_G0003076.1 mouse_genomes_project 11 119077310 119090865 - Rptoros antisense antisense MGP_BALBcJ_T0029700.1 MGP_BALBcJ_G0018423.1 mouse_genomes_project 11 65077781 65092860 - MGP_BALBcJ_P0029700 Adprm protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029701.1 MGP_BALBcJ_G0018423.1 mouse_genomes_project 11 65077917 65092836 - MGP_BALBcJ_P0029701 Adprm protein_coding protein_coding MGP_BALBcJ_T0029702.1 MGP_BALBcJ_G0018423.1 mouse_genomes_project 11 65078145 65080404 - Adprm protein_coding processed_transcript MGP_BALBcJ_T0029703.1 MGP_BALBcJ_G0018423.1 mouse_genomes_project 11 65081572 65092851 - Adprm protein_coding processed_transcript MGP_BALBcJ_T0029704.1 MGP_BALBcJ_G0018423.1 mouse_genomes_project 11 65081613 65092857 - Adprm protein_coding processed_transcript MGP_BALBcJ_T0029705.1 MGP_BALBcJ_G0018423.1 mouse_genomes_project 11 65081758 65092855 - Adprm protein_coding processed_transcript MGP_BALBcJ_T0006242.1 MGP_BALBcJ_G0005217.1 mouse_genomes_project 11 69694479 69752216 + 9230020A06Rik lincRNA lincRNA MGP_BALBcJ_T0006243.1 MGP_BALBcJ_G0005217.1 mouse_genomes_project 11 69726294 69751509 + 9230020A06Rik lincRNA lincRNA MGP_BALBcJ_T0012445.1 MGP_BALBcJ_G0010542.1 mouse_genomes_project 11 3544461 3544881 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033676.1 MGP_BALBcJ_G0019382.1 mouse_genomes_project 11 116020583 116046579 - MGP_BALBcJ_P0033676 Mxra7 protein_coding protein_coding MGP_BALBcJ_T0033677.1 MGP_BALBcJ_G0019382.1 mouse_genomes_project 11 116025153 116046546 - MGP_BALBcJ_P0033677 Mxra7 protein_coding protein_coding MGP_BALBcJ_T0033678.1 MGP_BALBcJ_G0019382.1 mouse_genomes_project 11 116025345 116046536 - MGP_BALBcJ_P0033678 Mxra7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012658.1 MGP_BALBcJ_G0010755.1 mouse_genomes_project 11 76093768 76094744 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012711.1 MGP_BALBcJ_G0010808.1 mouse_genomes_project 11 98173506 98174499 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028171.1 MGP_BALBcJ_G0018021.1 mouse_genomes_project 11 19895063 19920228 - MGP_BALBcJ_P0028171 B3gnt2 protein_coding protein_coding MGP_BALBcJ_T0028172.1 MGP_BALBcJ_G0018021.1 mouse_genomes_project 11 19895181 19920615 - MGP_BALBcJ_P0028172 B3gnt2 protein_coding protein_coding MGP_BALBcJ_T0028173.1 MGP_BALBcJ_G0018021.1 mouse_genomes_project 11 19896899 19921092 - MGP_BALBcJ_P0028173 B3gnt2 protein_coding protein_coding MGP_BALBcJ_T0034150.1 MGP_BALBcJ_G0019474.1 mouse_genomes_project 11 120098251 120206293 - MGP_BALBcJ_P0034150 Ccdc57 protein_coding protein_coding MGP_BALBcJ_T0034151.1 MGP_BALBcJ_G0019474.1 mouse_genomes_project 11 120098264 120146542 - Ccdc57 protein_coding processed_transcript MGP_BALBcJ_T0034152.1 MGP_BALBcJ_G0019474.1 mouse_genomes_project 11 120146662 120159383 - Ccdc57 protein_coding processed_transcript MGP_BALBcJ_T0030438.1 MGP_BALBcJ_G0018584.1 mouse_genomes_project 11 70889951 70928405 + Ankfy1 protein_coding retained_intron MGP_BALBcJ_T0030439.1 MGP_BALBcJ_G0018584.1 mouse_genomes_project 11 70889951 70974297 + MGP_BALBcJ_P0030439 Ankfy1 protein_coding protein_coding MGP_BALBcJ_T0030440.1 MGP_BALBcJ_G0018584.1 mouse_genomes_project 11 70889951 70973178 + MGP_BALBcJ_P0030440 Ankfy1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030441.1 MGP_BALBcJ_G0018584.1 mouse_genomes_project 11 70912027 70969545 + Ankfy1 protein_coding processed_transcript MGP_BALBcJ_T0030442.1 MGP_BALBcJ_G0018584.1 mouse_genomes_project 11 70963950 70964925 + Ankfy1 protein_coding retained_intron MGP_BALBcJ_T0030443.1 MGP_BALBcJ_G0018584.1 mouse_genomes_project 11 70968501 70969710 + Ankfy1 protein_coding retained_intron MGP_BALBcJ_T0017208.1 MGP_BALBcJ_G0015138.1 mouse_genomes_project 11 96405455 96429119 + 2410003L11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017209.1 MGP_BALBcJ_G0015138.1 mouse_genomes_project 11 96422366 96426363 + 2410003L11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017163.1 MGP_BALBcJ_G0015114.1 mouse_genomes_project 11 64205881 64334160 + Gm12296 processed_transcript processed_transcript MGP_BALBcJ_T0030887.1 MGP_BALBcJ_G0018701.1 mouse_genomes_project 11 76387584 76412611 + MGP_BALBcJ_P0030887 Flot2 protein_coding protein_coding MGP_BALBcJ_T0030888.1 MGP_BALBcJ_G0018701.1 mouse_genomes_project 11 76387584 76412611 + MGP_BALBcJ_P0030888 Flot2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030889.1 MGP_BALBcJ_G0018701.1 mouse_genomes_project 11 76387594 76412608 + MGP_BALBcJ_P0030889 Flot2 protein_coding protein_coding MGP_BALBcJ_T0030890.1 MGP_BALBcJ_G0018701.1 mouse_genomes_project 11 76387637 76412611 + MGP_BALBcJ_P0030890 Flot2 protein_coding protein_coding MGP_BALBcJ_T0030891.1 MGP_BALBcJ_G0018701.1 mouse_genomes_project 11 76389957 76412611 + Flot2 protein_coding processed_transcript MGP_BALBcJ_T0011293.1 MGP_BALBcJ_G0009418.1 mouse_genomes_project 11 104159934 104160030 + Gm24290 misc_RNA misc_RNA MGP_BALBcJ_T0032193.1 MGP_BALBcJ_G0019035.1 mouse_genomes_project 11 98306197 98315925 - MGP_BALBcJ_P0032193 Krt20 protein_coding protein_coding MGP_BALBcJ_T0102169.1 MGP_BALBcJ_G0039986.1 mouse_genomes_project 11 107771612 107772574 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0033474.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115066931 115098730 + MGP_BALBcJ_P0033474 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033475.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115066940 115088343 + MGP_BALBcJ_P0033475 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033476.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115066940 115098728 + MGP_BALBcJ_P0033476 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033477.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115074848 115087785 + MGP_BALBcJ_P0033477 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033478.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115076805 115088290 + MGP_BALBcJ_P0033478 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033479.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115077194 115088350 + MGP_BALBcJ_P0033479 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033480.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115077203 115088378 + MGP_BALBcJ_P0033480 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033481.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115096201 115097270 + Llgl2 protein_coding retained_intron MGP_BALBcJ_T0033482.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115096685 115097809 + Llgl2 protein_coding processed_transcript MGP_BALBcJ_T0033483.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115096752 115098730 + MGP_BALBcJ_P0033483 Llgl2 protein_coding protein_coding MGP_BALBcJ_T0033484.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115097182 115098534 + Llgl2 protein_coding retained_intron MGP_BALBcJ_T0033485.1 MGP_BALBcJ_G0019345.1 mouse_genomes_project 11 115097981 115098730 + Llgl2 protein_coding retained_intron MGP_BALBcJ_T0003301.1 MGP_BALBcJ_G0003047.1 mouse_genomes_project 11 106071929 106072156 + antisense antisense MGP_BALBcJ_T0030111.1 MGP_BALBcJ_G0018517.1 mouse_genomes_project 11 68154286 68163802 + MGP_BALBcJ_P0030111 Dvl2 protein_coding protein_coding MGP_BALBcJ_T0030112.1 MGP_BALBcJ_G0018517.1 mouse_genomes_project 11 68154308 68165992 + MGP_BALBcJ_P0030112 Dvl2 protein_coding protein_coding MGP_BALBcJ_T0030113.1 MGP_BALBcJ_G0018517.1 mouse_genomes_project 11 68154512 68160652 + Dvl2 protein_coding retained_intron MGP_BALBcJ_T0030114.1 MGP_BALBcJ_G0018517.1 mouse_genomes_project 11 68154526 68159704 + Dvl2 protein_coding retained_intron MGP_BALBcJ_T0030115.1 MGP_BALBcJ_G0018517.1 mouse_genomes_project 11 68159149 68161164 + Dvl2 protein_coding retained_intron MGP_BALBcJ_T0030116.1 MGP_BALBcJ_G0018517.1 mouse_genomes_project 11 68160670 68161760 + Dvl2 protein_coding retained_intron MGP_BALBcJ_T0012499.1 MGP_BALBcJ_G0010596.1 mouse_genomes_project 11 19003561 19004125 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0029396.1 MGP_BALBcJ_G0018358.1 mouse_genomes_project 11 58388266 58395529 + Drg2 protein_coding retained_intron MGP_BALBcJ_T0029397.1 MGP_BALBcJ_G0018358.1 mouse_genomes_project 11 58388266 58401900 + MGP_BALBcJ_P0029397 Drg2 protein_coding protein_coding MGP_BALBcJ_T0029398.1 MGP_BALBcJ_G0018358.1 mouse_genomes_project 11 58388299 58396327 + Drg2 protein_coding retained_intron MGP_BALBcJ_T0029399.1 MGP_BALBcJ_G0018358.1 mouse_genomes_project 11 58393104 58394011 + Drg2 protein_coding retained_intron MGP_BALBcJ_T0029400.1 MGP_BALBcJ_G0018358.1 mouse_genomes_project 11 58395182 58396722 + Drg2 protein_coding retained_intron MGP_BALBcJ_T0003212.1 MGP_BALBcJ_G0002976.1 mouse_genomes_project 11 76649278 76649607 - Gm11192 antisense antisense MGP_BALBcJ_T0012741.1 MGP_BALBcJ_G0010838.1 mouse_genomes_project 11 106244919 106245456 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099302.1 MGP_BALBcJ_G0037338.1 mouse_genomes_project 11 108602127 108602238 - Gm22378 snRNA snRNA MGP_BALBcJ_T0003346.1 MGP_BALBcJ_G0003082.1 mouse_genomes_project 11 119916632 119926427 + Myadml2os antisense antisense MGP_BALBcJ_T0034031.1 MGP_BALBcJ_G0019453.1 mouse_genomes_project 11 119825191 119838003 - MGP_BALBcJ_P0034031 P4hb protein_coding protein_coding MGP_BALBcJ_T0034032.1 MGP_BALBcJ_G0019453.1 mouse_genomes_project 11 119825198 119826130 - P4hb protein_coding processed_transcript MGP_BALBcJ_T0034033.1 MGP_BALBcJ_G0019453.1 mouse_genomes_project 11 119825838 119837591 - MGP_BALBcJ_P0034033 P4hb protein_coding protein_coding MGP_BALBcJ_T0012569.1 MGP_BALBcJ_G0010666.1 mouse_genomes_project 11 47902640 47902902 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032809.1 MGP_BALBcJ_G0019198.1 mouse_genomes_project 11 102129997 102133842 + MGP_BALBcJ_P0032809 Hexim1 protein_coding protein_coding MGP_BALBcJ_T0027961.1 MGP_BALBcJ_G0017968.1 mouse_genomes_project 11 3584851 3593068 - MGP_BALBcJ_P0027961 protein_coding protein_coding MGP_BALBcJ_T0027962.1 MGP_BALBcJ_G0017968.1 mouse_genomes_project 11 3584920 3586421 - MGP_BALBcJ_P0027962 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0027963.1 MGP_BALBcJ_G0017968.1 mouse_genomes_project 11 3584931 3586967 - MGP_BALBcJ_P0027963 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0029063.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52110732 52169229 + MGP_BALBcJ_P0029063 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029064.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52110749 52132351 + MGP_BALBcJ_P0029064 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029065.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52110929 52169233 + MGP_BALBcJ_P0029065 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029066.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52110929 52172446 + MGP_BALBcJ_P0029066 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029067.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52111012 52172451 + MGP_BALBcJ_P0029067 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029068.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52120396 52131798 + MGP_BALBcJ_P0029068 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029069.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52121706 52146735 + MGP_BALBcJ_P0029069 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029070.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52121706 52145176 + MGP_BALBcJ_P0029070 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029071.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52126842 52146519 + MGP_BALBcJ_P0029071 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029072.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52142944 52169233 + Acsl6 protein_coding processed_transcript MGP_BALBcJ_T0029073.1 MGP_BALBcJ_G0018254.1 mouse_genomes_project 11 52153333 52169222 + MGP_BALBcJ_P0029073 Acsl6 protein_coding protein_coding MGP_BALBcJ_T0029231.1 MGP_BALBcJ_G0018310.1 mouse_genomes_project 11 56550891 56551914 + MGP_BALBcJ_P0029231 protein_coding protein_coding MGP_BALBcJ_T0012707.1 MGP_BALBcJ_G0010804.1 mouse_genomes_project 11 95915651 95915771 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099247.1 MGP_BALBcJ_G0037283.1 mouse_genomes_project 11 49602189 49602297 + Gm26061 snRNA snRNA MGP_BALBcJ_T0011779.1 MGP_BALBcJ_G0009901.1 mouse_genomes_project 11 72125881 72130306 + MGP_BALBcJ_P0011779 Olfr396-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011780.1 MGP_BALBcJ_G0009901.1 mouse_genomes_project 11 72129586 72130219 + MGP_BALBcJ_P0011780 Olfr396-ps1 polymorphic_pseudogene protein_coding MGP_BALBcJ_T0003226.1 MGP_BALBcJ_G0002988.1 mouse_genomes_project 11 81398651 81418335 - Slfn5os antisense antisense MGP_BALBcJ_T0003289.1 MGP_BALBcJ_G0003036.1 mouse_genomes_project 11 102362560 102368106 + Arhgap27os3 antisense antisense MGP_BALBcJ_T0003295.1 MGP_BALBcJ_G0003042.1 mouse_genomes_project 11 104990976 105011170 - Gm11651 antisense antisense MGP_BALBcJ_T0003296.1 MGP_BALBcJ_G0003042.1 mouse_genomes_project 11 104997298 105011142 - Gm11651 antisense antisense MGP_BALBcJ_T0033771.1 MGP_BALBcJ_G0019401.1 mouse_genomes_project 11 117111679 117117206 - Tha1 protein_coding processed_transcript MGP_BALBcJ_T0033772.1 MGP_BALBcJ_G0019401.1 mouse_genomes_project 11 117111679 117117184 - MGP_BALBcJ_P0033772 Tha1 protein_coding protein_coding MGP_BALBcJ_T0033773.1 MGP_BALBcJ_G0019401.1 mouse_genomes_project 11 117113451 117115639 - Tha1 protein_coding processed_transcript MGP_BALBcJ_T0029841.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67158263 67164281 + MGP_BALBcJ_P0029841 Aurkb protein_coding protein_coding MGP_BALBcJ_T0029842.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67158268 67164281 + MGP_BALBcJ_P0029842 Aurkb protein_coding protein_coding MGP_BALBcJ_T0029843.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67158287 67160835 + Aurkb protein_coding processed_transcript MGP_BALBcJ_T0029844.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67158306 67160913 + Aurkb protein_coding retained_intron MGP_BALBcJ_T0029845.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67160593 67161690 + Aurkb protein_coding retained_intron MGP_BALBcJ_T0029846.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67161144 67161692 + Aurkb protein_coding retained_intron MGP_BALBcJ_T0029847.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67161185 67163354 + Aurkb protein_coding retained_intron MGP_BALBcJ_T0029848.1 MGP_BALBcJ_G0018454.1 mouse_genomes_project 11 67163179 67163756 + Aurkb protein_coding processed_transcript MGP_BALBcJ_T0033163.1 MGP_BALBcJ_G0019277.1 mouse_genomes_project 11 108576014 108592596 + Arsg protein_coding processed_transcript MGP_BALBcJ_T0033164.1 MGP_BALBcJ_G0019277.1 mouse_genomes_project 11 108576014 108676776 + MGP_BALBcJ_P0033164 Arsg protein_coding protein_coding MGP_BALBcJ_T0033165.1 MGP_BALBcJ_G0019277.1 mouse_genomes_project 11 108587631 108592494 + Arsg protein_coding processed_transcript MGP_BALBcJ_T0033166.1 MGP_BALBcJ_G0019277.1 mouse_genomes_project 11 108588214 108676781 + MGP_BALBcJ_P0033166 Arsg protein_coding protein_coding MGP_BALBcJ_T0033167.1 MGP_BALBcJ_G0019277.1 mouse_genomes_project 11 108646790 108676781 + MGP_BALBcJ_P0033167 Arsg protein_coding protein_coding MGP_BALBcJ_T0028687.1 MGP_BALBcJ_G0018151.1 mouse_genomes_project 11 46404324 46427309 - MGP_BALBcJ_P0028687 protein_coding protein_coding MGP_BALBcJ_T0032777.1 MGP_BALBcJ_G0019192.1 mouse_genomes_project 11 101925764 101945638 - MGP_BALBcJ_P0032777 Kif18b protein_coding protein_coding MGP_BALBcJ_T0032778.1 MGP_BALBcJ_G0019192.1 mouse_genomes_project 11 101937029 101945602 - Kif18b protein_coding processed_transcript MGP_BALBcJ_T0031557.1 MGP_BALBcJ_G0018877.1 mouse_genomes_project 11 88691546 88697728 + MGP_BALBcJ_P0031557 Tmem100 protein_coding protein_coding MGP_BALBcJ_T0012758.1 MGP_BALBcJ_G0010855.1 mouse_genomes_project 11 114970495 114970709 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011285.1 MGP_BALBcJ_G0009410.1 mouse_genomes_project 11 83851802 83852100 - Gm22587 misc_RNA misc_RNA MGP_BALBcJ_T0099242.1 MGP_BALBcJ_G0037278.1 mouse_genomes_project 11 34017907 34018013 + Gm22127 snRNA snRNA MGP_BALBcJ_T0028180.1 MGP_BALBcJ_G0018023.1 mouse_genomes_project 11 20033693 20036977 + MGP_BALBcJ_P0028180 Zrsr1 protein_coding protein_coding MGP_BALBcJ_T0012503.1 MGP_BALBcJ_G0010600.1 mouse_genomes_project 11 19840167 19840604 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033236.1 MGP_BALBcJ_G0019294.1 mouse_genomes_project 11 112861083 112871320 + MGP_BALBcJ_P0033236 D11Wsu47e protein_coding protein_coding MGP_BALBcJ_T0033237.1 MGP_BALBcJ_G0019294.1 mouse_genomes_project 11 112861111 112864887 + MGP_BALBcJ_P0033237 D11Wsu47e protein_coding protein_coding MGP_BALBcJ_T0033238.1 MGP_BALBcJ_G0019294.1 mouse_genomes_project 11 112861118 112871320 + MGP_BALBcJ_P0033238 D11Wsu47e protein_coding protein_coding MGP_BALBcJ_T0033239.1 MGP_BALBcJ_G0019294.1 mouse_genomes_project 11 112861757 112864802 + MGP_BALBcJ_P0033239 D11Wsu47e protein_coding protein_coding MGP_BALBcJ_T0029694.1 MGP_BALBcJ_G0018420.1 mouse_genomes_project 11 64248815 64550212 - MGP_BALBcJ_P0029694 Shisa6 protein_coding protein_coding MGP_BALBcJ_T0029695.1 MGP_BALBcJ_G0018420.1 mouse_genomes_project 11 64248815 64550212 - MGP_BALBcJ_P0029695 Shisa6 protein_coding protein_coding MGP_BALBcJ_T0029696.1 MGP_BALBcJ_G0018420.1 mouse_genomes_project 11 64409241 64527053 - Shisa6 protein_coding processed_transcript MGP_BALBcJ_T0031115.1 MGP_BALBcJ_G0018755.1 mouse_genomes_project 11 78910696 79211853 - MGP_BALBcJ_P0031115 Myo1d protein_coding protein_coding MGP_BALBcJ_T0031116.1 MGP_BALBcJ_G0018755.1 mouse_genomes_project 11 79014192 79211853 - MGP_BALBcJ_P0031116 Myo1d protein_coding protein_coding MGP_BALBcJ_T0031117.1 MGP_BALBcJ_G0018755.1 mouse_genomes_project 11 79104706 79211831 - Myo1d protein_coding retained_intron MGP_BALBcJ_T0032234.1 MGP_BALBcJ_G0019074.1 mouse_genomes_project 11 98905803 98907691 - MGP_BALBcJ_P0032234 Krtap16-1 protein_coding protein_coding MGP_BALBcJ_T0028067.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13503248 13511537 - MGP_BALBcJ_P0028067 Sec61g protein_coding protein_coding MGP_BALBcJ_T0028068.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13504106 13511231 - MGP_BALBcJ_P0028068 Sec61g protein_coding protein_coding MGP_BALBcJ_T0028069.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13504357 13511537 - MGP_BALBcJ_P0028069 Sec61g protein_coding protein_coding MGP_BALBcJ_T0028070.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13504357 13511537 - MGP_BALBcJ_P0028070 Sec61g protein_coding protein_coding MGP_BALBcJ_T0028071.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13504362 13508109 - Sec61g protein_coding retained_intron MGP_BALBcJ_T0028072.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13504370 13511134 - MGP_BALBcJ_P0028072 Sec61g protein_coding protein_coding MGP_BALBcJ_T0028073.1 MGP_BALBcJ_G0017992.1 mouse_genomes_project 11 13509156 13511197 - Sec61g protein_coding retained_intron MGP_BALBcJ_T0006341.1 MGP_BALBcJ_G0005287.1 mouse_genomes_project 11 116278256 116280051 + Gm11731 lincRNA lincRNA MGP_BALBcJ_T0012433.1 MGP_BALBcJ_G0010530.1 mouse_genomes_project 11 1018468 1018938 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033991.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119720972 119728065 + MGP_BALBcJ_P0033991 Ccdc137 protein_coding protein_coding MGP_BALBcJ_T0033992.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119720983 119722227 + Ccdc137 protein_coding processed_transcript MGP_BALBcJ_T0033993.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119720995 119721703 + Ccdc137 protein_coding retained_intron MGP_BALBcJ_T0033994.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119720999 119722969 + MGP_BALBcJ_P0033994 Ccdc137 protein_coding protein_coding MGP_BALBcJ_T0033995.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119721004 119725547 + MGP_BALBcJ_P0033995 Ccdc137 protein_coding protein_coding MGP_BALBcJ_T0033996.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119721043 119722862 + Ccdc137 protein_coding processed_transcript MGP_BALBcJ_T0033997.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119722658 119725663 + Ccdc137 protein_coding retained_intron MGP_BALBcJ_T0033998.1 MGP_BALBcJ_G0019445.1 mouse_genomes_project 11 119725596 119728064 + Ccdc137 protein_coding processed_transcript MGP_BALBcJ_T0028750.1 MGP_BALBcJ_G0018174.1 mouse_genomes_project 11 47213914 47260279 - MGP_BALBcJ_P0028750 Cnot6 protein_coding protein_coding MGP_BALBcJ_T0028751.1 MGP_BALBcJ_G0018174.1 mouse_genomes_project 11 47217109 47250309 - Cnot6 protein_coding processed_transcript MGP_BALBcJ_T0028752.1 MGP_BALBcJ_G0018174.1 mouse_genomes_project 11 47217124 47260266 - MGP_BALBcJ_P0028752 Cnot6 protein_coding protein_coding MGP_BALBcJ_T0028753.1 MGP_BALBcJ_G0018174.1 mouse_genomes_project 11 47219795 47227733 - Cnot6 protein_coding processed_transcript MGP_BALBcJ_T0028754.1 MGP_BALBcJ_G0018174.1 mouse_genomes_project 11 47228484 47230057 - Cnot6 protein_coding processed_transcript MGP_BALBcJ_T0032613.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101191592 101196044 + MGP_BALBcJ_P0032613 G6pc3 protein_coding protein_coding MGP_BALBcJ_T0032614.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101191641 101196044 + MGP_BALBcJ_P0032614 G6pc3 protein_coding protein_coding MGP_BALBcJ_T0032615.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101191727 101194104 + G6pc3 protein_coding processed_transcript MGP_BALBcJ_T0032616.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101191798 101195163 + G6pc3 protein_coding processed_transcript MGP_BALBcJ_T0032617.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101193771 101195615 + G6pc3 protein_coding processed_transcript MGP_BALBcJ_T0032618.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101193981 101195561 + G6pc3 protein_coding processed_transcript MGP_BALBcJ_T0032619.1 MGP_BALBcJ_G0019167.1 mouse_genomes_project 11 101193987 101195714 + G6pc3 protein_coding processed_transcript MGP_BALBcJ_T0006143.1 MGP_BALBcJ_G0005131.1 mouse_genomes_project 11 1190511 1198359 + Gm11959 lincRNA lincRNA MGP_BALBcJ_T0031360.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84767184 84814710 - MGP_BALBcJ_P0031360 Ints2 protein_coding protein_coding MGP_BALBcJ_T0031361.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84768591 84813708 - MGP_BALBcJ_P0031361 Ints2 protein_coding protein_coding MGP_BALBcJ_T0031362.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84774286 84785659 - MGP_BALBcJ_P0031362 Ints2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031363.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84781368 84788602 - Ints2 protein_coding retained_intron MGP_BALBcJ_T0031364.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84791237 84814701 - Ints2 protein_coding retained_intron MGP_BALBcJ_T0031365.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84792177 84795441 - Ints2 protein_coding retained_intron MGP_BALBcJ_T0031366.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84807921 84814735 - MGP_BALBcJ_P0031366 Ints2 protein_coding protein_coding MGP_BALBcJ_T0031367.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84812522 84814714 - MGP_BALBcJ_P0031367 Ints2 protein_coding protein_coding MGP_BALBcJ_T0031368.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84813187 84814678 - MGP_BALBcJ_P0031368 Ints2 protein_coding protein_coding MGP_BALBcJ_T0031369.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84813514 84814502 - Ints2 protein_coding retained_intron MGP_BALBcJ_T0031370.1 MGP_BALBcJ_G0018827.1 mouse_genomes_project 11 84813604 84814725 - Ints2 protein_coding processed_transcript MGP_BALBcJ_T0033774.1 MGP_BALBcJ_G0019402.1 mouse_genomes_project 11 117211259 117214367 - MGP_BALBcJ_P0033774 Socs3 protein_coding protein_coding MGP_BALBcJ_T0033775.1 MGP_BALBcJ_G0019402.1 mouse_genomes_project 11 117214055 117215228 - Socs3 protein_coding processed_transcript MGP_BALBcJ_T0033776.1 MGP_BALBcJ_G0019402.1 mouse_genomes_project 11 117214114 117214632 - Socs3 protein_coding processed_transcript MGP_BALBcJ_T0003130.1 MGP_BALBcJ_G0002906.1 mouse_genomes_project 11 40914621 40916077 - Gm12150 antisense antisense MGP_BALBcJ_T0012749.1 MGP_BALBcJ_G0010846.1 mouse_genomes_project 11 111176092 111176871 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031553.1 MGP_BALBcJ_G0018875.1 mouse_genomes_project 11 88051267 88190555 - MGP_BALBcJ_P0031553 protein_coding unknown_likely_coding MGP_BALBcJ_T0031554.1 MGP_BALBcJ_G0018875.1 mouse_genomes_project 11 88081967 88304040 - MGP_BALBcJ_P0031554 protein_coding protein_coding MGP_BALBcJ_T0031555.1 MGP_BALBcJ_G0018875.1 mouse_genomes_project 11 88082066 88202487 - MGP_BALBcJ_P0031555 protein_coding protein_coding MGP_BALBcJ_T0028911.1 MGP_BALBcJ_G0018215.1 mouse_genomes_project 11 49319222 49394429 - MGP_BALBcJ_P0028911 Sec24a protein_coding protein_coding MGP_BALBcJ_T0028912.1 MGP_BALBcJ_G0018215.1 mouse_genomes_project 11 49321644 49394022 - MGP_BALBcJ_P0028912 Sec24a protein_coding protein_coding MGP_BALBcJ_T0028913.1 MGP_BALBcJ_G0018215.1 mouse_genomes_project 11 49351372 49394249 - MGP_BALBcJ_P0028913 Sec24a protein_coding protein_coding MGP_BALBcJ_T0028914.1 MGP_BALBcJ_G0018215.1 mouse_genomes_project 11 49351372 49394242 - MGP_BALBcJ_P0028914 Sec24a protein_coding protein_coding MGP_BALBcJ_T0028915.1 MGP_BALBcJ_G0018215.1 mouse_genomes_project 11 49365001 49394972 - Sec24a protein_coding retained_intron MGP_BALBcJ_T0028916.1 MGP_BALBcJ_G0018215.1 mouse_genomes_project 11 49377436 49401331 - Sec24a protein_coding retained_intron MGP_BALBcJ_T0003300.1 MGP_BALBcJ_G0003046.1 mouse_genomes_project 11 105863353 105864692 - Gm11706 antisense antisense MGP_BALBcJ_T0099262.1 MGP_BALBcJ_G0037298.1 mouse_genomes_project 11 71084879 71085041 + Gm26121 snRNA snRNA MGP_BALBcJ_T0032912.1 MGP_BALBcJ_G0019223.1 mouse_genomes_project 11 104144939 104159100 + MGP_BALBcJ_P0032912 Mettl2 protein_coding protein_coding MGP_BALBcJ_T0032913.1 MGP_BALBcJ_G0019223.1 mouse_genomes_project 11 104144993 104159100 + Mettl2 protein_coding processed_transcript MGP_BALBcJ_T0032914.1 MGP_BALBcJ_G0019223.1 mouse_genomes_project 11 104150949 104157691 + Mettl2 protein_coding processed_transcript MGP_BALBcJ_T0032915.1 MGP_BALBcJ_G0019223.1 mouse_genomes_project 11 104150960 104154157 + Mettl2 protein_coding processed_transcript MGP_BALBcJ_T0032916.1 MGP_BALBcJ_G0019223.1 mouse_genomes_project 11 104156063 104159100 + Mettl2 protein_coding processed_transcript MGP_BALBcJ_T0003216.1 MGP_BALBcJ_G0002980.1 mouse_genomes_project 11 78021427 78037890 - Rab11fip4os1 antisense antisense MGP_BALBcJ_T0030901.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76534126 76544616 - Nek8 protein_coding retained_intron MGP_BALBcJ_T0030902.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76534126 76544680 - MGP_BALBcJ_P0030902 Nek8 protein_coding protein_coding MGP_BALBcJ_T0030903.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76534130 76535408 - Nek8 protein_coding retained_intron MGP_BALBcJ_T0030904.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76534541 76544632 - Nek8 protein_coding retained_intron MGP_BALBcJ_T0030905.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76535274 76536054 - Nek8 protein_coding retained_intron MGP_BALBcJ_T0030906.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76536992 76537849 - Nek8 protein_coding retained_intron MGP_BALBcJ_T0030907.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76538011 76544619 - Nek8 protein_coding retained_intron MGP_BALBcJ_T0030908.1 MGP_BALBcJ_G0018705.1 mouse_genomes_project 11 76539207 76544639 - MGP_BALBcJ_P0030908 Nek8 protein_coding protein_coding MGP_BALBcJ_T0006230.1 MGP_BALBcJ_G0005208.1 mouse_genomes_project 11 62853409 62856718 - Gm12292 lincRNA lincRNA MGP_BALBcJ_T0028795.1 MGP_BALBcJ_G0018183.1 mouse_genomes_project 11 47788371 47790374 - MGP_BALBcJ_P0028795 protein_coding protein_coding MGP_BALBcJ_T0028796.1 MGP_BALBcJ_G0018183.1 mouse_genomes_project 11 47788374 47790435 - MGP_BALBcJ_P0028796 protein_coding protein_coding MGP_BALBcJ_T0028797.1 MGP_BALBcJ_G0018183.1 mouse_genomes_project 11 47788374 47790519 - MGP_BALBcJ_P0028797 protein_coding protein_coding MGP_BALBcJ_T0102155.1 MGP_BALBcJ_G0039972.1 mouse_genomes_project 11 93293195 93294826 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0029078.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52328582 52504035 + MGP_BALBcJ_P0029078 Rapgef6 protein_coding protein_coding MGP_BALBcJ_T0029079.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52328624 52359383 + Rapgef6 protein_coding processed_transcript MGP_BALBcJ_T0029080.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52328625 52501729 + MGP_BALBcJ_P0029080 Rapgef6 protein_coding protein_coding MGP_BALBcJ_T0029081.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52328625 52435895 + MGP_BALBcJ_P0029081 Rapgef6 protein_coding protein_coding MGP_BALBcJ_T0029082.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52328646 52368182 + Rapgef6 protein_coding processed_transcript MGP_BALBcJ_T0029083.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52397032 52439750 + Rapgef6 protein_coding processed_transcript MGP_BALBcJ_T0029084.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52397936 52500855 + MGP_BALBcJ_P0029084 Rapgef6 protein_coding unknown_likely_coding MGP_BALBcJ_T0029085.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52423251 52492778 + MGP_BALBcJ_P0029085 Rapgef6 protein_coding protein_coding MGP_BALBcJ_T0029086.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52423251 52492857 + MGP_BALBcJ_P0029086 Rapgef6 protein_coding protein_coding MGP_BALBcJ_T0029087.1 MGP_BALBcJ_G0018257.1 mouse_genomes_project 11 52496184 52501236 + MGP_BALBcJ_P0029087 Rapgef6 protein_coding protein_coding MGP_BALBcJ_T0033014.1 MGP_BALBcJ_G0019249.1 mouse_genomes_project 11 105409682 105414806 - MGP_BALBcJ_P0033014 Icam2 protein_coding protein_coding MGP_BALBcJ_T0033015.1 MGP_BALBcJ_G0019249.1 mouse_genomes_project 11 105410588 105412826 - MGP_BALBcJ_P0033015 Icam2 protein_coding protein_coding MGP_BALBcJ_T0033016.1 MGP_BALBcJ_G0019249.1 mouse_genomes_project 11 105410834 105420014 - MGP_BALBcJ_P0033016 Icam2 protein_coding protein_coding MGP_BALBcJ_T0033017.1 MGP_BALBcJ_G0019249.1 mouse_genomes_project 11 105412712 105420017 - MGP_BALBcJ_P0033017 Icam2 protein_coding protein_coding MGP_BALBcJ_T0033018.1 MGP_BALBcJ_G0019249.1 mouse_genomes_project 11 105413069 105415021 - Icam2 protein_coding retained_intron MGP_BALBcJ_T0003318.1 MGP_BALBcJ_G0003060.1 mouse_genomes_project 11 108902475 108908027 + Gm11683 antisense antisense MGP_BALBcJ_T0031213.1 MGP_BALBcJ_G0018789.1 mouse_genomes_project 11 81961953 81984208 - MGP_BALBcJ_P0031213 Mmp28 protein_coding protein_coding MGP_BALBcJ_T0031214.1 MGP_BALBcJ_G0018789.1 mouse_genomes_project 11 81963061 81984147 - MGP_BALBcJ_P0031214 Mmp28 protein_coding protein_coding MGP_BALBcJ_T0031215.1 MGP_BALBcJ_G0018789.1 mouse_genomes_project 11 81963061 81984257 - MGP_BALBcJ_P0031215 Mmp28 protein_coding protein_coding MGP_BALBcJ_T0031216.1 MGP_BALBcJ_G0018789.1 mouse_genomes_project 11 81964246 81984178 - MGP_BALBcJ_P0031216 Mmp28 protein_coding protein_coding MGP_BALBcJ_T0031217.1 MGP_BALBcJ_G0018789.1 mouse_genomes_project 11 81972571 81984257 - Mmp28 protein_coding processed_transcript MGP_BALBcJ_T0003326.1 MGP_BALBcJ_G0003067.1 mouse_genomes_project 11 115715767 115723684 + Gm11739 antisense antisense MGP_BALBcJ_T0003214.1 MGP_BALBcJ_G0002978.1 mouse_genomes_project 11 77425277 77433689 + Gm11201 antisense antisense MGP_BALBcJ_T0028540.1 MGP_BALBcJ_G0018108.1 mouse_genomes_project 11 39629775 39646115 - MGP_BALBcJ_P0028540 Gabra6 protein_coding protein_coding MGP_BALBcJ_T0028541.1 MGP_BALBcJ_G0018108.1 mouse_genomes_project 11 39629776 39646117 - MGP_BALBcJ_P0028541 Gabra6 protein_coding protein_coding MGP_BALBcJ_T0028542.1 MGP_BALBcJ_G0018108.1 mouse_genomes_project 11 39631816 39646138 - MGP_BALBcJ_P0028542 Gabra6 protein_coding protein_coding MGP_BALBcJ_T0029742.1 MGP_BALBcJ_G0018435.1 mouse_genomes_project 11 65850640 65853261 + Dhrs7c protein_coding processed_transcript MGP_BALBcJ_T0029743.1 MGP_BALBcJ_G0018435.1 mouse_genomes_project 11 65850724 65853629 + Dhrs7c protein_coding processed_transcript MGP_BALBcJ_T0029744.1 MGP_BALBcJ_G0018435.1 mouse_genomes_project 11 65850729 65853790 + Dhrs7c protein_coding processed_transcript MGP_BALBcJ_T0029745.1 MGP_BALBcJ_G0018435.1 mouse_genomes_project 11 65850730 65851520 + Dhrs7c protein_coding processed_transcript MGP_BALBcJ_T0029746.1 MGP_BALBcJ_G0018435.1 mouse_genomes_project 11 65850740 65868498 + MGP_BALBcJ_P0029746 Dhrs7c protein_coding protein_coding MGP_BALBcJ_T0099282.1 MGP_BALBcJ_G0037318.1 mouse_genomes_project 11 87734839 87734943 - Gm22534 snRNA snRNA MGP_BALBcJ_T0028476.1 MGP_BALBcJ_G0018092.1 mouse_genomes_project 11 31485227 31488990 - MGP_BALBcJ_P0028476 Foxi1 protein_coding protein_coding MGP_BALBcJ_T0031182.1 MGP_BALBcJ_G0018777.1 mouse_genomes_project 11 81437435 81453236 - MGP_BALBcJ_P0031182 Slfn9 protein_coding protein_coding MGP_BALBcJ_T0012753.1 MGP_BALBcJ_G0010850.1 mouse_genomes_project 11 113857625 113857927 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031190.1 MGP_BALBcJ_G0018783.1 mouse_genomes_project 11 81793638 81805660 - MGP_BALBcJ_P0031190 Slfn14 protein_coding protein_coding MGP_BALBcJ_T0028317.1 MGP_BALBcJ_G0018050.1 mouse_genomes_project 11 26744929 26780121 + MGP_BALBcJ_P0028317 Clhc1 protein_coding protein_coding MGP_BALBcJ_T0028318.1 MGP_BALBcJ_G0018050.1 mouse_genomes_project 11 26761036 26780100 + Clhc1 protein_coding processed_transcript MGP_BALBcJ_T0028319.1 MGP_BALBcJ_G0018050.1 mouse_genomes_project 11 26761053 26779958 + Clhc1 protein_coding processed_transcript MGP_BALBcJ_T0030964.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76716332 76722005 + MGP_BALBcJ_P0030964 Unc119 protein_coding protein_coding MGP_BALBcJ_T0030965.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76716348 76720690 + Unc119 protein_coding retained_intron MGP_BALBcJ_T0030966.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76716356 76722005 + MGP_BALBcJ_P0030966 Unc119 protein_coding protein_coding MGP_BALBcJ_T0030967.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76716395 76721737 + Unc119 protein_coding retained_intron MGP_BALBcJ_T0030968.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76719506 76721820 + MGP_BALBcJ_P0030968 Unc119 protein_coding protein_coding MGP_BALBcJ_T0030969.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76719751 76720960 + Unc119 protein_coding retained_intron MGP_BALBcJ_T0030970.1 MGP_BALBcJ_G0018717.1 mouse_genomes_project 11 76720775 76721839 + Unc119 protein_coding retained_intron MGP_BALBcJ_T0029566.1 MGP_BALBcJ_G0018392.1 mouse_genomes_project 11 60291760 60292876 + Ttc19 protein_coding processed_transcript MGP_BALBcJ_T0029567.1 MGP_BALBcJ_G0018392.1 mouse_genomes_project 11 60291769 60326064 + MGP_BALBcJ_P0029567 Ttc19 protein_coding protein_coding MGP_BALBcJ_T0029568.1 MGP_BALBcJ_G0018392.1 mouse_genomes_project 11 60291771 60327244 + MGP_BALBcJ_P0029568 Ttc19 protein_coding protein_coding MGP_BALBcJ_T0029569.1 MGP_BALBcJ_G0018392.1 mouse_genomes_project 11 60293961 60338935 + MGP_BALBcJ_P0029569 Ttc19 protein_coding protein_coding MGP_BALBcJ_T0029570.1 MGP_BALBcJ_G0018392.1 mouse_genomes_project 11 60319954 60339241 + Ttc19 protein_coding processed_transcript MGP_BALBcJ_T0030137.1 MGP_BALBcJ_G0018520.1 mouse_genomes_project 11 68208846 68212833 + MGP_BALBcJ_P0030137 Asgr1 protein_coding protein_coding MGP_BALBcJ_T0030138.1 MGP_BALBcJ_G0018520.1 mouse_genomes_project 11 68209116 68212833 + MGP_BALBcJ_P0030138 Asgr1 protein_coding protein_coding MGP_BALBcJ_T0030139.1 MGP_BALBcJ_G0018520.1 mouse_genomes_project 11 68209116 68212830 + MGP_BALBcJ_P0030139 Asgr1 protein_coding protein_coding MGP_BALBcJ_T0030140.1 MGP_BALBcJ_G0018520.1 mouse_genomes_project 11 68209459 68212833 + MGP_BALBcJ_P0030140 Asgr1 protein_coding protein_coding MGP_BALBcJ_T0030141.1 MGP_BALBcJ_G0018520.1 mouse_genomes_project 11 68210640 68212309 + MGP_BALBcJ_P0030141 Asgr1 protein_coding protein_coding MGP_BALBcJ_T0032596.1 MGP_BALBcJ_G0019162.1 mouse_genomes_project 11 101096393 101097826 - MGP_BALBcJ_P0032596 Ppy protein_coding protein_coding MGP_BALBcJ_T0032597.1 MGP_BALBcJ_G0019162.1 mouse_genomes_project 11 101096393 101097817 - MGP_BALBcJ_P0032597 Ppy protein_coding protein_coding MGP_BALBcJ_T0017213.1 MGP_BALBcJ_G0015142.1 mouse_genomes_project 11 97187909 97195479 - 1700003D09Rik processed_transcript processed_transcript MGP_BALBcJ_T0033873.1 MGP_BALBcJ_G0019423.1 mouse_genomes_project 11 118599741 118612816 - MGP_BALBcJ_P0033873 Sgsh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033874.1 MGP_BALBcJ_G0019423.1 mouse_genomes_project 11 118602562 118612844 - Sgsh protein_coding processed_transcript MGP_BALBcJ_T0033875.1 MGP_BALBcJ_G0019423.1 mouse_genomes_project 11 118602598 118612828 - MGP_BALBcJ_P0033875 Sgsh protein_coding protein_coding MGP_BALBcJ_T0033876.1 MGP_BALBcJ_G0019423.1 mouse_genomes_project 11 118602738 118604182 - Sgsh protein_coding processed_transcript MGP_BALBcJ_T0033877.1 MGP_BALBcJ_G0019423.1 mouse_genomes_project 11 118603119 118610120 - Sgsh protein_coding processed_transcript MGP_BALBcJ_T0017174.1 MGP_BALBcJ_G0015121.1 mouse_genomes_project 11 73748193 73753331 + Mir22hg processed_transcript processed_transcript MGP_BALBcJ_T0017175.1 MGP_BALBcJ_G0015121.1 mouse_genomes_project 11 73748298 73750684 + Mir22hg processed_transcript processed_transcript MGP_BALBcJ_T0003171.1 MGP_BALBcJ_G0002942.1 mouse_genomes_project 11 59504412 59505086 - B9d1os antisense antisense MGP_BALBcJ_T0003133.1 MGP_BALBcJ_G0002909.1 mouse_genomes_project 11 43474548 43475676 - Gm16034 antisense antisense MGP_BALBcJ_T0017248.1 MGP_BALBcJ_G0015159.1 mouse_genomes_project 11 118809760 118830242 + Gm11762 processed_transcript processed_transcript MGP_BALBcJ_T0033399.1 MGP_BALBcJ_G0019334.1 mouse_genomes_project 11 114726412 114743428 - MGP_BALBcJ_P0033399 Hn1 protein_coding protein_coding MGP_BALBcJ_T0033400.1 MGP_BALBcJ_G0019334.1 mouse_genomes_project 11 114727710 114743189 - Hn1 protein_coding processed_transcript MGP_BALBcJ_T0033401.1 MGP_BALBcJ_G0019334.1 mouse_genomes_project 11 114727809 114743389 - Hn1 protein_coding processed_transcript MGP_BALBcJ_T0033402.1 MGP_BALBcJ_G0019334.1 mouse_genomes_project 11 114730061 114743412 - Hn1 protein_coding processed_transcript MGP_BALBcJ_T0033403.1 MGP_BALBcJ_G0019334.1 mouse_genomes_project 11 114732497 114743157 - Hn1 protein_coding processed_transcript MGP_BALBcJ_T0003281.1 MGP_BALBcJ_G0003028.1 mouse_genomes_project 11 100569507 100574912 - antisense antisense MGP_BALBcJ_T0012716.1 MGP_BALBcJ_G0010813.1 mouse_genomes_project 11 98909227 98909686 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003195.1 MGP_BALBcJ_G0002961.1 mouse_genomes_project 11 65617800 65623630 - Gm12301 antisense antisense MGP_BALBcJ_T0006266.1 MGP_BALBcJ_G0005234.1 mouse_genomes_project 11 81735274 81737570 + AI662270 lincRNA lincRNA MGP_BALBcJ_T0006267.1 MGP_BALBcJ_G0005234.1 mouse_genomes_project 11 81735274 81738305 + AI662270 lincRNA lincRNA MGP_BALBcJ_T0006268.1 MGP_BALBcJ_G0005234.1 mouse_genomes_project 11 81735847 81736294 + AI662270 lincRNA lincRNA MGP_BALBcJ_T0012648.1 MGP_BALBcJ_G0010745.1 mouse_genomes_project 11 73014664 73014832 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031518.1 MGP_BALBcJ_G0018863.1 mouse_genomes_project 11 86827582 86835508 + MGP_BALBcJ_P0031518 Mrps23 protein_coding protein_coding MGP_BALBcJ_T0031519.1 MGP_BALBcJ_G0018863.1 mouse_genomes_project 11 86827605 86835508 + MGP_BALBcJ_P0031519 Mrps23 protein_coding protein_coding MGP_BALBcJ_T0031520.1 MGP_BALBcJ_G0018863.1 mouse_genomes_project 11 86827618 86834681 + MGP_BALBcJ_P0031520 Mrps23 protein_coding protein_coding MGP_BALBcJ_T0031521.1 MGP_BALBcJ_G0018863.1 mouse_genomes_project 11 86827618 86834220 + MGP_BALBcJ_P0031521 Mrps23 protein_coding protein_coding MGP_BALBcJ_T0031522.1 MGP_BALBcJ_G0018863.1 mouse_genomes_project 11 86827638 86834982 + MGP_BALBcJ_P0031522 Mrps23 protein_coding protein_coding MGP_BALBcJ_T0033048.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105827278 105837400 - MGP_BALBcJ_P0033048 Ddx5 protein_coding protein_coding MGP_BALBcJ_T0033049.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105828471 105837362 - MGP_BALBcJ_P0033049 Ddx5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033050.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105832179 105837335 - Ddx5 protein_coding processed_transcript MGP_BALBcJ_T0033051.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105832608 105833922 - Ddx5 protein_coding retained_intron MGP_BALBcJ_T0033052.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105834018 105834926 - Ddx5 protein_coding processed_transcript MGP_BALBcJ_T0033053.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105834371 105838053 - MGP_BALBcJ_P0033053 Ddx5 protein_coding protein_coding MGP_BALBcJ_T0033054.1 MGP_BALBcJ_G0019255.1 mouse_genomes_project 11 105834946 105837751 - MGP_BALBcJ_P0033054 Ddx5 protein_coding protein_coding MGP_BALBcJ_T0027688.1 MGP_BALBcJ_G0017906.1 mouse_genomes_project 11 793003 797108 + MGP_BALBcJ_P0027688 Dusp18 protein_coding protein_coding MGP_BALBcJ_T0027689.1 MGP_BALBcJ_G0017906.1 mouse_genomes_project 11 793003 799051 + MGP_BALBcJ_P0027689 Dusp18 protein_coding protein_coding MGP_BALBcJ_T0032946.1 MGP_BALBcJ_G0019229.1 mouse_genomes_project 11 104958196 104968643 - MGP_BALBcJ_P0032946 Cyb561 protein_coding protein_coding MGP_BALBcJ_T0032947.1 MGP_BALBcJ_G0019229.1 mouse_genomes_project 11 104959586 104968627 - MGP_BALBcJ_P0032947 Cyb561 protein_coding protein_coding MGP_BALBcJ_T0032948.1 MGP_BALBcJ_G0019229.1 mouse_genomes_project 11 104959991 104960680 - Cyb561 protein_coding processed_transcript MGP_BALBcJ_T0032949.1 MGP_BALBcJ_G0019229.1 mouse_genomes_project 11 104960301 104978750 - MGP_BALBcJ_P0032949 Cyb561 protein_coding protein_coding MGP_BALBcJ_T0032950.1 MGP_BALBcJ_G0019229.1 mouse_genomes_project 11 104960712 104968917 - MGP_BALBcJ_P0032950 Cyb561 protein_coding protein_coding MGP_BALBcJ_T0032951.1 MGP_BALBcJ_G0019229.1 mouse_genomes_project 11 104961057 104968975 - MGP_BALBcJ_P0032951 Cyb561 protein_coding protein_coding MGP_BALBcJ_T0027714.1 MGP_BALBcJ_G0017913.1 mouse_genomes_project 11 972880 988860 + MGP_BALBcJ_P0027714 Sec14l3 protein_coding protein_coding MGP_BALBcJ_T0027715.1 MGP_BALBcJ_G0017913.1 mouse_genomes_project 11 972930 978239 + Sec14l3 protein_coding retained_intron MGP_BALBcJ_T0027716.1 MGP_BALBcJ_G0017913.1 mouse_genomes_project 11 972991 987431 + Sec14l3 protein_coding processed_transcript MGP_BALBcJ_T0027717.1 MGP_BALBcJ_G0017913.1 mouse_genomes_project 11 972991 987431 + Sec14l3 protein_coding processed_transcript MGP_BALBcJ_T0027718.1 MGP_BALBcJ_G0017913.1 mouse_genomes_project 11 980199 987867 + Sec14l3 protein_coding processed_transcript MGP_BALBcJ_T0029251.1 MGP_BALBcJ_G0018322.1 mouse_genomes_project 11 56840463 56847567 - MGP_BALBcJ_P0029251 protein_coding protein_coding MGP_BALBcJ_T0099245.1 MGP_BALBcJ_G0037281.1 mouse_genomes_project 11 38376456 38376612 - Gm24446 snRNA snRNA MGP_BALBcJ_T0012700.1 MGP_BALBcJ_G0010797.1 mouse_genomes_project 11 94204109 94204285 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0033148.1 MGP_BALBcJ_G0019273.1 mouse_genomes_project 11 108463073 108502546 + MGP_BALBcJ_P0033148 Gna13 protein_coding protein_coding MGP_BALBcJ_T0033149.1 MGP_BALBcJ_G0019273.1 mouse_genomes_project 11 108463073 108481369 + MGP_BALBcJ_P0033149 Gna13 protein_coding protein_coding MGP_BALBcJ_T0033727.1 MGP_BALBcJ_G0019391.1 mouse_genomes_project 11 116894249 117005849 + MGP_BALBcJ_P0033727 Tnrc6c protein_coding protein_coding MGP_BALBcJ_T0033728.1 MGP_BALBcJ_G0019391.1 mouse_genomes_project 11 116894533 117005840 + Tnrc6c protein_coding retained_intron MGP_BALBcJ_T0033729.1 MGP_BALBcJ_G0019391.1 mouse_genomes_project 11 116894773 117005851 + MGP_BALBcJ_P0033729 Tnrc6c protein_coding protein_coding MGP_BALBcJ_T0033730.1 MGP_BALBcJ_G0019391.1 mouse_genomes_project 11 116962045 117004648 + MGP_BALBcJ_P0033730 Tnrc6c protein_coding protein_coding MGP_BALBcJ_T0033731.1 MGP_BALBcJ_G0019391.1 mouse_genomes_project 11 116983568 116990369 + Tnrc6c protein_coding retained_intron MGP_BALBcJ_T0033732.1 MGP_BALBcJ_G0019391.1 mouse_genomes_project 11 116990298 116992376 + Tnrc6c protein_coding retained_intron MGP_BALBcJ_T0029878.1 MGP_BALBcJ_G0018463.1 mouse_genomes_project 11 67300934 67315149 - MGP_BALBcJ_P0029878 Alox8 protein_coding protein_coding MGP_BALBcJ_T0029879.1 MGP_BALBcJ_G0018463.1 mouse_genomes_project 11 67302092 67315115 - MGP_BALBcJ_P0029879 Alox8 protein_coding protein_coding MGP_BALBcJ_T0029880.1 MGP_BALBcJ_G0018463.1 mouse_genomes_project 11 67307181 67315117 - Alox8 protein_coding retained_intron MGP_BALBcJ_T0029881.1 MGP_BALBcJ_G0018463.1 mouse_genomes_project 11 67308846 67314690 - Alox8 protein_coding retained_intron MGP_BALBcJ_T0003199.1 MGP_BALBcJ_G0002965.1 mouse_genomes_project 11 67411597 67412924 + Cntrobos antisense antisense MGP_BALBcJ_T0017245.1 MGP_BALBcJ_G0015156.1 mouse_genomes_project 11 116658794 116671494 + Gm11732 processed_transcript processed_transcript MGP_BALBcJ_T0006285.1 MGP_BALBcJ_G0005245.1 mouse_genomes_project 11 87380927 87382735 - Gm11493 lincRNA lincRNA MGP_BALBcJ_T0028385.1 MGP_BALBcJ_G0018067.1 mouse_genomes_project 11 29233434 29296204 + MGP_BALBcJ_P0028385 Nsg2 protein_coding protein_coding MGP_BALBcJ_T0028386.1 MGP_BALBcJ_G0018067.1 mouse_genomes_project 11 29233434 29251483 + MGP_BALBcJ_P0028386 Nsg2 protein_coding protein_coding MGP_BALBcJ_T0028387.1 MGP_BALBcJ_G0018067.1 mouse_genomes_project 11 29233473 29271214 + MGP_BALBcJ_P0028387 Nsg2 protein_coding protein_coding MGP_BALBcJ_T0028437.1 MGP_BALBcJ_G0018079.1 mouse_genomes_project 11 29786348 29878250 + MGP_BALBcJ_P0028437 Stk10 protein_coding protein_coding MGP_BALBcJ_T0028438.1 MGP_BALBcJ_G0018079.1 mouse_genomes_project 11 29841524 29851975 + Stk10 protein_coding retained_intron MGP_BALBcJ_T0006199.1 MGP_BALBcJ_G0005180.1 mouse_genomes_project 11 41628087 41630120 - Gm12154 lincRNA lincRNA MGP_BALBcJ_T0027662.1 MGP_BALBcJ_G0017901.1 mouse_genomes_project 11 405230 407894 + Selm protein_coding processed_transcript MGP_BALBcJ_T0027663.1 MGP_BALBcJ_G0017901.1 mouse_genomes_project 11 405248 407676 + Selm protein_coding processed_transcript MGP_BALBcJ_T0027664.1 MGP_BALBcJ_G0017901.1 mouse_genomes_project 11 405413 407897 + MGP_BALBcJ_P0027664 Selm protein_coding protein_coding MGP_BALBcJ_T0031945.1 MGP_BALBcJ_G0018971.1 mouse_genomes_project 11 96160126 96197557 + MGP_BALBcJ_P0031945 Socs7 protein_coding protein_coding MGP_BALBcJ_T0031946.1 MGP_BALBcJ_G0018971.1 mouse_genomes_project 11 96175236 96176467 + Socs7 protein_coding processed_transcript MGP_BALBcJ_T0029178.1 MGP_BALBcJ_G0018285.1 mouse_genomes_project 11 55998342 56006647 + MGP_BALBcJ_P0029178 Mrpl22 protein_coding protein_coding MGP_BALBcJ_T0029179.1 MGP_BALBcJ_G0018285.1 mouse_genomes_project 11 55998368 56002889 + Mrpl22 protein_coding processed_transcript MGP_BALBcJ_T0029180.1 MGP_BALBcJ_G0018285.1 mouse_genomes_project 11 55998381 56003967 + Mrpl22 protein_coding processed_transcript MGP_BALBcJ_T0033629.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115782390 115788119 + MGP_BALBcJ_P0033629 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033630.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115782586 115787162 + MGP_BALBcJ_P0033630 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033631.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115782627 115786746 + Sphk1 protein_coding retained_intron MGP_BALBcJ_T0033632.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783205 115788119 + MGP_BALBcJ_P0033632 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033633.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783372 115788132 + MGP_BALBcJ_P0033633 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033634.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783905 115788136 + MGP_BALBcJ_P0033634 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033635.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783912 115788130 + Sphk1 protein_coding retained_intron MGP_BALBcJ_T0033636.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783915 115787174 + MGP_BALBcJ_P0033636 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033637.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783918 115786803 + MGP_BALBcJ_P0033637 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033638.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115783934 115788136 + MGP_BALBcJ_P0033638 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033639.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115784386 115788119 + MGP_BALBcJ_P0033639 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033640.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115784712 115787098 + Sphk1 protein_coding processed_transcript MGP_BALBcJ_T0033641.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115784729 115787457 + MGP_BALBcJ_P0033641 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033642.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115785036 115787160 + MGP_BALBcJ_P0033642 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033643.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115785621 115786750 + Sphk1 protein_coding retained_intron MGP_BALBcJ_T0033644.1 MGP_BALBcJ_G0019373.1 mouse_genomes_project 11 115786201 115788132 + MGP_BALBcJ_P0033644 Sphk1 protein_coding protein_coding MGP_BALBcJ_T0033869.1 MGP_BALBcJ_G0019422.1 mouse_genomes_project 11 118567990 118601696 + MGP_BALBcJ_P0033869 Card14 protein_coding protein_coding MGP_BALBcJ_T0033870.1 MGP_BALBcJ_G0019422.1 mouse_genomes_project 11 118572969 118601696 + MGP_BALBcJ_P0033870 Card14 protein_coding protein_coding MGP_BALBcJ_T0033871.1 MGP_BALBcJ_G0019422.1 mouse_genomes_project 11 118578223 118601508 + Card14 protein_coding processed_transcript MGP_BALBcJ_T0033872.1 MGP_BALBcJ_G0019422.1 mouse_genomes_project 11 118580517 118601695 + Card14 protein_coding processed_transcript MGP_BALBcJ_T0031075.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620011 78681206 + MGP_BALBcJ_P0031075 Rhot1 protein_coding protein_coding MGP_BALBcJ_T0031076.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620050 78682301 + MGP_BALBcJ_P0031076 Rhot1 protein_coding protein_coding MGP_BALBcJ_T0031077.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620079 78681880 + MGP_BALBcJ_P0031077 Rhot1 protein_coding protein_coding MGP_BALBcJ_T0031078.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620108 78666659 + Rhot1 protein_coding retained_intron MGP_BALBcJ_T0031079.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620114 78681161 + MGP_BALBcJ_P0031079 Rhot1 protein_coding protein_coding MGP_BALBcJ_T0031080.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620142 78661096 + Rhot1 protein_coding retained_intron MGP_BALBcJ_T0031081.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78620282 78681890 + MGP_BALBcJ_P0031081 Rhot1 protein_coding protein_coding MGP_BALBcJ_T0031082.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78664366 78681132 + Rhot1 protein_coding processed_transcript MGP_BALBcJ_T0031083.1 MGP_BALBcJ_G0018749.1 mouse_genomes_project 11 78667033 78669135 + Rhot1 protein_coding retained_intron MGP_BALBcJ_T0032495.1 MGP_BALBcJ_G0019142.1 mouse_genomes_project 11 100390938 100397460 - MGP_BALBcJ_P0032495 Ptges3l protein_coding protein_coding MGP_BALBcJ_T0032496.1 MGP_BALBcJ_G0019142.1 mouse_genomes_project 11 100390938 100396796 - MGP_BALBcJ_P0032496 Ptges3l protein_coding protein_coding MGP_BALBcJ_T0032497.1 MGP_BALBcJ_G0019142.1 mouse_genomes_project 11 100392997 100396796 - MGP_BALBcJ_P0032497 Ptges3l protein_coding protein_coding MGP_BALBcJ_T0032498.1 MGP_BALBcJ_G0019142.1 mouse_genomes_project 11 100393544 100395983 - MGP_BALBcJ_P0032498 Ptges3l protein_coding protein_coding MGP_BALBcJ_T0032499.1 MGP_BALBcJ_G0019142.1 mouse_genomes_project 11 100393958 100396359 - Ptges3l protein_coding retained_intron MGP_BALBcJ_T0100522.1 MGP_BALBcJ_G0038558.1 mouse_genomes_project 11 70030933 70031064 - Gm22927 snoRNA snoRNA MGP_BALBcJ_T0030469.1 MGP_BALBcJ_G0018590.1 mouse_genomes_project 11 71251375 71294987 + MGP_BALBcJ_P0030469 Ncbp3 protein_coding protein_coding MGP_BALBcJ_T0030470.1 MGP_BALBcJ_G0018590.1 mouse_genomes_project 11 71251462 71264111 + Ncbp3 protein_coding retained_intron MGP_BALBcJ_T0030471.1 MGP_BALBcJ_G0018590.1 mouse_genomes_project 11 71251465 71262049 + Ncbp3 protein_coding retained_intron MGP_BALBcJ_T0102142.1 MGP_BALBcJ_G0039959.1 mouse_genomes_project 11 71745481 71746416 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0031411.1 MGP_BALBcJ_G0018837.1 mouse_genomes_project 11 85589432 85629519 - MGP_BALBcJ_P0031411 Gdpd1 protein_coding protein_coding MGP_BALBcJ_T0029339.1 MGP_BALBcJ_G0018348.1 mouse_genomes_project 11 57764742 57801958 + Nt5m protein_coding processed_transcript MGP_BALBcJ_T0029340.1 MGP_BALBcJ_G0018348.1 mouse_genomes_project 11 57764742 57806393 + Nt5m protein_coding processed_transcript MGP_BALBcJ_T0029341.1 MGP_BALBcJ_G0018348.1 mouse_genomes_project 11 57773368 57801958 + MGP_BALBcJ_P0029341 Nt5m protein_coding protein_coding MGP_BALBcJ_T0029342.1 MGP_BALBcJ_G0018348.1 mouse_genomes_project 11 57773399 57801958 + Nt5m protein_coding processed_transcript MGP_BALBcJ_T0012659.1 MGP_BALBcJ_G0010756.1 mouse_genomes_project 11 76517216 76517459 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003298.1 MGP_BALBcJ_G0003044.1 mouse_genomes_project 11 105087958 105089186 - Taco1os antisense antisense MGP_BALBcJ_T0030404.1 MGP_BALBcJ_G0018575.1 mouse_genomes_project 11 70489227 70496663 + MGP_BALBcJ_P0030404 Xaf1 protein_coding protein_coding MGP_BALBcJ_T0030405.1 MGP_BALBcJ_G0018575.1 mouse_genomes_project 11 70489228 70503695 + MGP_BALBcJ_P0030405 Xaf1 protein_coding protein_coding MGP_BALBcJ_T0030406.1 MGP_BALBcJ_G0018575.1 mouse_genomes_project 11 70489237 70502043 + MGP_BALBcJ_P0030406 Xaf1 protein_coding protein_coding MGP_BALBcJ_T0030407.1 MGP_BALBcJ_G0018575.1 mouse_genomes_project 11 70489261 70496351 + MGP_BALBcJ_P0030407 Xaf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0030408.1 MGP_BALBcJ_G0018575.1 mouse_genomes_project 11 70489263 70496370 + Xaf1 protein_coding retained_intron MGP_BALBcJ_T0012508.1 MGP_BALBcJ_G0010605.1 mouse_genomes_project 11 23891956 23904478 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017186.1 MGP_BALBcJ_G0015127.1 mouse_genomes_project 11 82110060 82153254 + E230016K23Rik processed_transcript processed_transcript MGP_BALBcJ_T0017187.1 MGP_BALBcJ_G0015127.1 mouse_genomes_project 11 82110088 82130571 + E230016K23Rik processed_transcript processed_transcript MGP_BALBcJ_T0017188.1 MGP_BALBcJ_G0015127.1 mouse_genomes_project 11 82151222 82152464 + E230016K23Rik processed_transcript processed_transcript MGP_BALBcJ_T0033404.1 MGP_BALBcJ_G0019335.1 mouse_genomes_project 11 114751929 114765716 - MGP_BALBcJ_P0033404 Sumo2 protein_coding unknown_likely_coding MGP_BALBcJ_T0033405.1 MGP_BALBcJ_G0019335.1 mouse_genomes_project 11 114758716 114765774 - Sumo2 protein_coding retained_intron MGP_BALBcJ_T0033406.1 MGP_BALBcJ_G0019335.1 mouse_genomes_project 11 114763976 114765787 - Sumo2 protein_coding retained_intron MGP_BALBcJ_T0012756.1 MGP_BALBcJ_G0010853.1 mouse_genomes_project 11 114722277 114722436 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003129.1 MGP_BALBcJ_G0002905.1 mouse_genomes_project 11 40582502 40634591 - Gm12147 antisense antisense MGP_BALBcJ_T0033004.1 MGP_BALBcJ_G0019246.1 mouse_genomes_project 11 105343482 105346904 - MGP_BALBcJ_P0033004 Cd79b protein_coding protein_coding MGP_BALBcJ_T0033005.1 MGP_BALBcJ_G0019246.1 mouse_genomes_project 11 105343485 105346671 - MGP_BALBcJ_P0033005 Cd79b protein_coding protein_coding MGP_BALBcJ_T0031540.1 MGP_BALBcJ_G0018869.1 mouse_genomes_project 11 87604387 87632081 + MGP_BALBcJ_P0031540 Coil protein_coding protein_coding MGP_BALBcJ_T0031541.1 MGP_BALBcJ_G0018869.1 mouse_genomes_project 11 87614977 87632081 + MGP_BALBcJ_P0031541 Coil protein_coding protein_coding MGP_BALBcJ_T0031542.1 MGP_BALBcJ_G0018869.1 mouse_genomes_project 11 87628065 87631422 + Coil protein_coding retained_intron MGP_BALBcJ_T0028919.1 MGP_BALBcJ_G0018217.1 mouse_genomes_project 11 49451571 49487095 - MGP_BALBcJ_P0028919 Jade2 protein_coding protein_coding MGP_BALBcJ_T0028920.1 MGP_BALBcJ_G0018217.1 mouse_genomes_project 11 49480344 49494780 - Jade2 protein_coding processed_transcript MGP_BALBcJ_T0003169.1 MGP_BALBcJ_G0002940.1 mouse_genomes_project 11 58172272 58173393 + Gm12265 antisense antisense MGP_BALBcJ_T0031021.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77646107 77661200 - MGP_BALBcJ_P0031021 Wsb1 protein_coding protein_coding MGP_BALBcJ_T0031022.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77646123 77649782 - Wsb1 protein_coding retained_intron MGP_BALBcJ_T0031023.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77647011 77655416 - MGP_BALBcJ_P0031023 Wsb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031024.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77647042 77649685 - Wsb1 protein_coding processed_transcript MGP_BALBcJ_T0031025.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77650045 77661198 - MGP_BALBcJ_P0031025 Wsb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031026.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77650157 77660999 - MGP_BALBcJ_P0031026 Wsb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031027.1 MGP_BALBcJ_G0018734.1 mouse_genomes_project 11 77650864 77657553 - Wsb1 protein_coding retained_intron MGP_BALBcJ_T0009673.1 MGP_BALBcJ_G0007798.1 mouse_genomes_project 11 67788780 67788863 + Mir1934 miRNA miRNA MGP_BALBcJ_T0009643.1 MGP_BALBcJ_G0007768.1 mouse_genomes_project 11 35347590 35347667 - Gm25693 miRNA miRNA MGP_BALBcJ_T0031834.1 MGP_BALBcJ_G0018948.1 mouse_genomes_project 11 95107601 95131900 + MGP_BALBcJ_P0031834 Hoxb3 protein_coding protein_coding MGP_BALBcJ_T0031835.1 MGP_BALBcJ_G0018948.1 mouse_genomes_project 11 95112147 95128274 + MGP_BALBcJ_P0031835 Hoxb3 protein_coding protein_coding MGP_BALBcJ_T0031836.1 MGP_BALBcJ_G0018948.1 mouse_genomes_project 11 95124932 95125742 + Hoxb3 protein_coding processed_transcript MGP_BALBcJ_T0031837.1 MGP_BALBcJ_G0018948.1 mouse_genomes_project 11 95127739 95130477 + MGP_BALBcJ_P0031837 Hoxb3 protein_coding protein_coding MGP_BALBcJ_T0012671.1 MGP_BALBcJ_G0010768.1 mouse_genomes_project 11 81171153 81171447 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0032017.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96832682 96854166 - MGP_BALBcJ_P0032017 Cacnb1 protein_coding protein_coding MGP_BALBcJ_T0032018.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96834075 96854159 - MGP_BALBcJ_P0032018 Cacnb1 protein_coding protein_coding MGP_BALBcJ_T0032019.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96836275 96849901 - MGP_BALBcJ_P0032019 Cacnb1 protein_coding protein_coding MGP_BALBcJ_T0032020.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96836453 96854166 - MGP_BALBcJ_P0032020 Cacnb1 protein_coding protein_coding MGP_BALBcJ_T0032021.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96836453 96854166 - MGP_BALBcJ_P0032021 Cacnb1 protein_coding protein_coding MGP_BALBcJ_T0032022.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96841153 96854566 - Cacnb1 protein_coding processed_transcript MGP_BALBcJ_T0032023.1 MGP_BALBcJ_G0018988.1 mouse_genomes_project 11 96841188 96844080 - Cacnb1 protein_coding processed_transcript MGP_BALBcJ_T0029203.1 MGP_BALBcJ_G0018292.1 mouse_genomes_project 11 56210876 56222931 + MGP_BALBcJ_P0029203 Lypd8 protein_coding protein_coding MGP_BALBcJ_T0029204.1 MGP_BALBcJ_G0018292.1 mouse_genomes_project 11 56210876 56222740 + MGP_BALBcJ_P0029204 Lypd8 protein_coding protein_coding MGP_BALBcJ_T0028037.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8810279 8895119 - MGP_BALBcJ_P0028037 Ddc protein_coding protein_coding MGP_BALBcJ_T0028038.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8810279 8895019 - MGP_BALBcJ_P0028038 Ddc protein_coding protein_coding MGP_BALBcJ_T0028039.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8810281 8819069 - Ddc protein_coding processed_transcript MGP_BALBcJ_T0028040.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8810281 8887222 - MGP_BALBcJ_P0028040 Ddc protein_coding protein_coding MGP_BALBcJ_T0028041.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8815523 8832561 - Ddc protein_coding processed_transcript MGP_BALBcJ_T0028042.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8841245 8861300 - Ddc protein_coding processed_transcript MGP_BALBcJ_T0028043.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8842908 8887183 - MGP_BALBcJ_P0028043 Ddc protein_coding protein_coding MGP_BALBcJ_T0028044.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8857969 8887215 - Ddc protein_coding processed_transcript MGP_BALBcJ_T0028045.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8869648 8877504 - Ddc protein_coding processed_transcript MGP_BALBcJ_T0028046.1 MGP_BALBcJ_G0017988.1 mouse_genomes_project 11 8871587 8887212 - Ddc protein_coding processed_transcript MGP_BALBcJ_T0012437.1 MGP_BALBcJ_G0010534.1 mouse_genomes_project 11 2588409 2588853 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009702.1 MGP_BALBcJ_G0007827.1 mouse_genomes_project 11 84316158 84316245 - Mir5110 miRNA miRNA MGP_BALBcJ_T0031633.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92958536 92992572 - MGP_BALBcJ_P0031633 Luc7l3 protein_coding protein_coding MGP_BALBcJ_T0031634.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92961730 92967735 - MGP_BALBcJ_P0031634 Luc7l3 protein_coding protein_coding MGP_BALBcJ_T0031635.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92961730 92992602 - MGP_BALBcJ_P0031635 Luc7l3 protein_coding protein_coding MGP_BALBcJ_T0031636.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92961808 92992602 - MGP_BALBcJ_P0031636 Luc7l3 protein_coding protein_coding MGP_BALBcJ_T0031637.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92961808 92992602 - MGP_BALBcJ_P0031637 Luc7l3 protein_coding protein_coding MGP_BALBcJ_T0031638.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92961998 92963889 - MGP_BALBcJ_P0031638 Luc7l3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031639.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92963439 92992509 - MGP_BALBcJ_P0031639 Luc7l3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0031640.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92967674 92968886 - Luc7l3 protein_coding retained_intron MGP_BALBcJ_T0031641.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92967682 92969692 - Luc7l3 protein_coding processed_transcript MGP_BALBcJ_T0031642.1 MGP_BALBcJ_G0018894.1 mouse_genomes_project 11 92967723 92970893 - Luc7l3 protein_coding retained_intron MGP_BALBcJ_T0033261.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113920509 113940551 + Dnaic2 protein_coding processed_transcript MGP_BALBcJ_T0033262.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113920513 113953984 + MGP_BALBcJ_P0033262 Dnaic2 protein_coding protein_coding MGP_BALBcJ_T0033263.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113920517 113950463 + Dnaic2 protein_coding processed_transcript MGP_BALBcJ_T0033264.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113922263 113953984 + MGP_BALBcJ_P0033264 Dnaic2 protein_coding protein_coding MGP_BALBcJ_T0033265.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113926017 113950573 + MGP_BALBcJ_P0033265 Dnaic2 protein_coding protein_coding MGP_BALBcJ_T0033266.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113930380 113950180 + Dnaic2 protein_coding processed_transcript MGP_BALBcJ_T0033267.1 MGP_BALBcJ_G0019300.1 mouse_genomes_project 11 113948786 113953257 + Dnaic2 protein_coding processed_transcript MGP_BALBcJ_T0031983.1 MGP_BALBcJ_G0018981.1 mouse_genomes_project 11 96594769 96599840 - MGP_BALBcJ_P0031983 1700001P01Rik protein_coding protein_coding MGP_BALBcJ_T0031745.1 MGP_BALBcJ_G0018920.1 mouse_genomes_project 11 93994161 94001896 + MGP_BALBcJ_P0031745 Tac4 protein_coding protein_coding MGP_BALBcJ_T0028465.1 MGP_BALBcJ_G0018089.1 mouse_genomes_project 11 30898978 30950348 - MGP_BALBcJ_P0028465 Kcnip1 protein_coding protein_coding MGP_BALBcJ_T0028466.1 MGP_BALBcJ_G0018089.1 mouse_genomes_project 11 30898986 31125302 - MGP_BALBcJ_P0028466 Kcnip1 protein_coding protein_coding MGP_BALBcJ_T0028467.1 MGP_BALBcJ_G0018089.1 mouse_genomes_project 11 30898986 31125360 - MGP_BALBcJ_P0028467 Kcnip1 protein_coding protein_coding MGP_BALBcJ_T0028468.1 MGP_BALBcJ_G0018089.1 mouse_genomes_project 11 30910376 31276544 - Kcnip1 protein_coding processed_transcript MGP_BALBcJ_T0028469.1 MGP_BALBcJ_G0018089.1 mouse_genomes_project 11 30910700 31276380 - Kcnip1 protein_coding processed_transcript MGP_BALBcJ_T0032035.1 MGP_BALBcJ_G0018992.1 mouse_genomes_project 11 96987059 97030113 - MGP_BALBcJ_P0032035 Med1 protein_coding protein_coding MGP_BALBcJ_T0032036.1 MGP_BALBcJ_G0018992.1 mouse_genomes_project 11 96987062 97030290 - MGP_BALBcJ_P0032036 Med1 protein_coding protein_coding MGP_BALBcJ_T0032037.1 MGP_BALBcJ_G0018992.1 mouse_genomes_project 11 96987919 96998863 - Med1 protein_coding processed_transcript MGP_BALBcJ_T0032038.1 MGP_BALBcJ_G0018992.1 mouse_genomes_project 11 96992658 96995928 - Med1 protein_coding processed_transcript MGP_BALBcJ_T0032039.1 MGP_BALBcJ_G0018992.1 mouse_genomes_project 11 97004268 97015195 - Med1 protein_coding processed_transcript MGP_BALBcJ_T0032040.1 MGP_BALBcJ_G0018992.1 mouse_genomes_project 11 97004816 97030306 - Med1 protein_coding processed_transcript MGP_BALBcJ_T0012722.1 MGP_BALBcJ_G0010819.1 mouse_genomes_project 11 100934812 100935211 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028379.1 MGP_BALBcJ_G0018064.1 mouse_genomes_project 11 28896512 28902955 - MGP_BALBcJ_P0028379 Bod1 protein_coding protein_coding MGP_BALBcJ_T0028380.1 MGP_BALBcJ_G0018064.1 mouse_genomes_project 11 28897813 28902797 - MGP_BALBcJ_P0028380 Bod1 protein_coding protein_coding MGP_BALBcJ_T0003292.1 MGP_BALBcJ_G0003039.1 mouse_genomes_project 11 103259448 103267326 - Gm11659 antisense antisense MGP_BALBcJ_T0028840.1 MGP_BALBcJ_G0018193.1 mouse_genomes_project 11 48443417 48458171 - MGP_BALBcJ_P0028840 Zfp454 protein_coding protein_coding MGP_BALBcJ_T0028841.1 MGP_BALBcJ_G0018193.1 mouse_genomes_project 11 48444855 48458324 - Zfp454 protein_coding processed_transcript MGP_BALBcJ_T0028842.1 MGP_BALBcJ_G0018193.1 mouse_genomes_project 11 48448576 48458324 - MGP_BALBcJ_P0028842 Zfp454 protein_coding protein_coding MGP_BALBcJ_T0028843.1 MGP_BALBcJ_G0018193.1 mouse_genomes_project 11 48448788 48458203 - Zfp454 protein_coding processed_transcript MGP_BALBcJ_T0033712.1 MGP_BALBcJ_G0019388.1 mouse_genomes_project 11 116334970 116371797 + Sec14l1 protein_coding retained_intron MGP_BALBcJ_T0033713.1 MGP_BALBcJ_G0019388.1 mouse_genomes_project 11 116334974 116380146 + MGP_BALBcJ_P0033713 Sec14l1 protein_coding protein_coding MGP_BALBcJ_T0033714.1 MGP_BALBcJ_G0019388.1 mouse_genomes_project 11 116335040 116378440 + MGP_BALBcJ_P0033714 Sec14l1 protein_coding protein_coding MGP_BALBcJ_T0033715.1 MGP_BALBcJ_G0019388.1 mouse_genomes_project 11 116335040 116380149 + MGP_BALBcJ_P0033715 Sec14l1 protein_coding protein_coding MGP_BALBcJ_T0033716.1 MGP_BALBcJ_G0019388.1 mouse_genomes_project 11 116335054 116348539 + Sec14l1 protein_coding processed_transcript MGP_BALBcJ_T0033717.1 MGP_BALBcJ_G0019388.1 mouse_genomes_project 11 116375340 116376747 + Sec14l1 protein_coding retained_intron MGP_BALBcJ_T0033450.1 MGP_BALBcJ_G0019341.1 mouse_genomes_project 11 114880106 114939237 - MGP_BALBcJ_P0033450 Grb2 protein_coding protein_coding MGP_BALBcJ_T0033451.1 MGP_BALBcJ_G0019341.1 mouse_genomes_project 11 114880106 114939464 - MGP_BALBcJ_P0033451 Grb2 protein_coding protein_coding MGP_BALBcJ_T0033452.1 MGP_BALBcJ_G0019341.1 mouse_genomes_project 11 114880106 114948501 - MGP_BALBcJ_P0033452 Grb2 protein_coding protein_coding MGP_BALBcJ_T0033453.1 MGP_BALBcJ_G0019341.1 mouse_genomes_project 11 114880711 114948480 - MGP_BALBcJ_P0033453 Grb2 protein_coding protein_coding MGP_BALBcJ_T0033454.1 MGP_BALBcJ_G0019341.1 mouse_genomes_project 11 114885918 114939858 - MGP_BALBcJ_P0033454 Grb2 protein_coding protein_coding MGP_BALBcJ_T0030526.1 MGP_BALBcJ_G0018614.1 mouse_genomes_project 11 72011687 72016396 - MGP_BALBcJ_P0030526 Olfr391-ps protein_coding protein_coding MGP_BALBcJ_T0029133.1 MGP_BALBcJ_G0018270.1 mouse_genomes_project 11 53203985 53229544 - MGP_BALBcJ_P0029133 Sparc protein_coding protein_coding MGP_BALBcJ_T0029134.1 MGP_BALBcJ_G0018270.1 mouse_genomes_project 11 53203985 53229726 - MGP_BALBcJ_P0029134 Sparc protein_coding protein_coding MGP_BALBcJ_T0029135.1 MGP_BALBcJ_G0018270.1 mouse_genomes_project 11 53204871 53209040 - Sparc protein_coding processed_transcript MGP_BALBcJ_T0029136.1 MGP_BALBcJ_G0018270.1 mouse_genomes_project 11 53205005 53211534 - Sparc protein_coding processed_transcript MGP_BALBcJ_T0029137.1 MGP_BALBcJ_G0018270.1 mouse_genomes_project 11 53208717 53229544 - MGP_BALBcJ_P0029137 Sparc protein_coding protein_coding MGP_BALBcJ_T0029138.1 MGP_BALBcJ_G0018270.1 mouse_genomes_project 11 53218708 53229546 - Sparc protein_coding processed_transcript MGP_BALBcJ_T0101845.1 MGP_BALBcJ_G0039765.1 mouse_genomes_project 11 71659859 71663263 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101846.1 MGP_BALBcJ_G0039765.1 mouse_genomes_project 11 71660061 71663280 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0027911.1 MGP_BALBcJ_G0017956.1 mouse_genomes_project 11 3061077 3148985 - MGP_BALBcJ_P0027911 Nudcd3 protein_coding protein_coding MGP_BALBcJ_T0027912.1 MGP_BALBcJ_G0017956.1 mouse_genomes_project 11 3061372 3075076 - Nudcd3 protein_coding processed_transcript MGP_BALBcJ_T0027913.1 MGP_BALBcJ_G0017956.1 mouse_genomes_project 11 3061844 3142078 - MGP_BALBcJ_P0027913 Nudcd3 protein_coding protein_coding MGP_BALBcJ_T0027914.1 MGP_BALBcJ_G0017956.1 mouse_genomes_project 11 3078599 3142078 - Nudcd3 protein_coding retained_intron MGP_BALBcJ_T0017173.1 MGP_BALBcJ_G0015120.1 mouse_genomes_project 11 73455802 73460871 + 1700016P03Rik processed_transcript processed_transcript MGP_BALBcJ_T0006297.1 MGP_BALBcJ_G0005255.1 mouse_genomes_project 11 94608999 94610012 - Gm11527 lincRNA lincRNA MGP_BALBcJ_T0027921.1 MGP_BALBcJ_G0017960.1 mouse_genomes_project 11 3233336 3237774 - MGP_BALBcJ_P0027921 Tmed4 protein_coding protein_coding MGP_BALBcJ_T0027922.1 MGP_BALBcJ_G0017960.1 mouse_genomes_project 11 3234628 3237774 - Tmed4 protein_coding retained_intron MGP_BALBcJ_T0027923.1 MGP_BALBcJ_G0017960.1 mouse_genomes_project 11 3236644 3237769 - MGP_BALBcJ_P0027923 Tmed4 protein_coding protein_coding MGP_BALBcJ_T0028702.1 MGP_BALBcJ_G0018157.1 mouse_genomes_project 11 46568443 46570541 - MGP_BALBcJ_P0028702 protein_coding protein_coding MGP_BALBcJ_T0028741.1 MGP_BALBcJ_G0018167.1 mouse_genomes_project 11 46989455 46990391 + MGP_BALBcJ_P0028741 Olfr1387 protein_coding protein_coding MGP_BALBcJ_T0099252.1 MGP_BALBcJ_G0037288.1 mouse_genomes_project 11 58715821 58715918 + Gm23341 snRNA snRNA MGP_BALBcJ_T0030660.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73820895 73832521 + MGP_BALBcJ_P0030660 Slc43a2 protein_coding protein_coding MGP_BALBcJ_T0030661.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73820899 73866707 + MGP_BALBcJ_P0030661 Slc43a2 protein_coding protein_coding MGP_BALBcJ_T0030662.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73820899 73863064 + MGP_BALBcJ_P0030662 Slc43a2 protein_coding protein_coding MGP_BALBcJ_T0030663.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73820944 73834975 + MGP_BALBcJ_P0030663 Slc43a2 protein_coding protein_coding MGP_BALBcJ_T0030664.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73821313 73866702 + MGP_BALBcJ_P0030664 Slc43a2 protein_coding protein_coding MGP_BALBcJ_T0030665.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73821339 73835028 + MGP_BALBcJ_P0030665 Slc43a2 protein_coding protein_coding MGP_BALBcJ_T0030666.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73827205 73834962 + Slc43a2 protein_coding processed_transcript MGP_BALBcJ_T0030667.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73849987 73856240 + Slc43a2 protein_coding retained_intron MGP_BALBcJ_T0030668.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73855179 73859364 + Slc43a2 protein_coding processed_transcript MGP_BALBcJ_T0030669.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73855875 73861593 + Slc43a2 protein_coding retained_intron MGP_BALBcJ_T0030670.1 MGP_BALBcJ_G0018657.1 mouse_genomes_project 11 73855988 73860971 + Slc43a2 protein_coding processed_transcript MGP_BALBcJ_T0033971.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119628648 119638333 - Faap100 protein_coding retained_intron MGP_BALBcJ_T0033972.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119629155 119638362 - MGP_BALBcJ_P0033972 Faap100 protein_coding protein_coding MGP_BALBcJ_T0033973.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119629474 119630482 - Faap100 protein_coding retained_intron MGP_BALBcJ_T0033974.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119632566 119633763 - Faap100 protein_coding processed_transcript MGP_BALBcJ_T0033975.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119632621 119638334 - Faap100 protein_coding retained_intron MGP_BALBcJ_T0033976.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119635767 119638307 - Faap100 protein_coding processed_transcript MGP_BALBcJ_T0033977.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119636583 119638072 - Faap100 protein_coding processed_transcript MGP_BALBcJ_T0033978.1 MGP_BALBcJ_G0019440.1 mouse_genomes_project 11 119636920 119638333 - Faap100 protein_coding processed_transcript MGP_BALBcJ_T0032349.1 MGP_BALBcJ_G0019110.1 mouse_genomes_project 11 99678690 99698409 - MGP_BALBcJ_P0032349 Kcnh4 protein_coding protein_coding MGP_BALBcJ_T0032350.1 MGP_BALBcJ_G0019110.1 mouse_genomes_project 11 99678696 99698611 - MGP_BALBcJ_P0032350 Kcnh4 protein_coding protein_coding MGP_BALBcJ_T0030066.1 MGP_BALBcJ_G0018508.1 mouse_genomes_project 11 68066908 68069597 + MGP_BALBcJ_P0030066 Gps2 protein_coding protein_coding MGP_BALBcJ_T0030067.1 MGP_BALBcJ_G0018508.1 mouse_genomes_project 11 68067070 68069611 + MGP_BALBcJ_P0030067 Gps2 protein_coding protein_coding MGP_BALBcJ_T0030068.1 MGP_BALBcJ_G0018508.1 mouse_genomes_project 11 68067212 68069612 + MGP_BALBcJ_P0030068 Gps2 protein_coding protein_coding MGP_BALBcJ_T0030069.1 MGP_BALBcJ_G0018508.1 mouse_genomes_project 11 68067865 68068901 + Gps2 protein_coding processed_transcript MGP_BALBcJ_T0030070.1 MGP_BALBcJ_G0018508.1 mouse_genomes_project 11 68069061 68069577 + MGP_BALBcJ_P0030070 Gps2 protein_coding protein_coding MGP_BALBcJ_T0012746.1 MGP_BALBcJ_G0010843.1 mouse_genomes_project 11 108253286 108254294 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012562.1 MGP_BALBcJ_G0010659.1 mouse_genomes_project 11 45936136 45936667 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0028568.1 MGP_BALBcJ_G0018114.1 mouse_genomes_project 11 40808440 40823738 + MGP_BALBcJ_P0028568 C1qtnf2 protein_coding protein_coding MGP_BALBcJ_T0028569.1 MGP_BALBcJ_G0018114.1 mouse_genomes_project 11 40808470 40823758 + MGP_BALBcJ_P0028569 C1qtnf2 protein_coding protein_coding MGP_BALBcJ_T0028570.1 MGP_BALBcJ_G0018114.1 mouse_genomes_project 11 40814911 40823097 + MGP_BALBcJ_P0028570 C1qtnf2 protein_coding protein_coding MGP_BALBcJ_T0012644.1 MGP_BALBcJ_G0010741.1 mouse_genomes_project 11 71984391 71984588 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0031596.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92541575 92603831 + MGP_BALBcJ_P0031596 Mbtd1 protein_coding protein_coding MGP_BALBcJ_T0031597.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92541589 92577635 + MGP_BALBcJ_P0031597 Mbtd1 protein_coding protein_coding MGP_BALBcJ_T0031598.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92541829 92577645 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031599.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92541930 92564971 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031600.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92541931 92566432 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031601.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92541942 92603831 + MGP_BALBcJ_P0031601 Mbtd1 protein_coding protein_coding MGP_BALBcJ_T0031602.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92542604 92586421 + MGP_BALBcJ_P0031602 Mbtd1 protein_coding protein_coding MGP_BALBcJ_T0031603.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92561244 92603834 + MGP_BALBcJ_P0031603 Mbtd1 protein_coding protein_coding MGP_BALBcJ_T0031604.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92566016 92568449 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031605.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92568443 92588884 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031606.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92573919 92588593 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031607.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92579226 92582478 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0031608.1 MGP_BALBcJ_G0018886.1 mouse_genomes_project 11 92581698 92593957 + Mbtd1 protein_coding processed_transcript MGP_BALBcJ_T0033679.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116055995 116061858 - Jmjd6 protein_coding retained_intron MGP_BALBcJ_T0033680.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116055995 116062026 - MGP_BALBcJ_P0033680 Jmjd6 protein_coding protein_coding MGP_BALBcJ_T0033681.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116055996 116061867 - Jmjd6 protein_coding retained_intron MGP_BALBcJ_T0033682.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116055996 116061932 - MGP_BALBcJ_P0033682 Jmjd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033683.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116055998 116059806 - MGP_BALBcJ_P0033683 Jmjd6 protein_coding protein_coding MGP_BALBcJ_T0033684.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116056151 116061282 - MGP_BALBcJ_P0033684 Jmjd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033685.1 MGP_BALBcJ_G0019383.1 mouse_genomes_project 11 116056176 116061297 - MGP_BALBcJ_P0033685 Jmjd6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033215.1 MGP_BALBcJ_G0019289.1 mouse_genomes_project 11 110204700 110215996 + MGP_BALBcJ_P0033215 Kcnj2 protein_coding protein_coding MGP_BALBcJ_T0029722.1 MGP_BALBcJ_G0018429.1 mouse_genomes_project 11 65318106 65350722 + MGP_BALBcJ_P0029722 Myh8 protein_coding protein_coding MGP_BALBcJ_T0029723.1 MGP_BALBcJ_G0018429.1 mouse_genomes_project 11 65318400 65336356 + Myh8 protein_coding retained_intron MGP_BALBcJ_T0029724.1 MGP_BALBcJ_G0018429.1 mouse_genomes_project 11 65318400 65323151 + MGP_BALBcJ_P0029724 Myh8 protein_coding protein_coding MGP_BALBcJ_T0029725.1 MGP_BALBcJ_G0018429.1 mouse_genomes_project 11 65320971 65333287 + Myh8 protein_coding retained_intron MGP_BALBcJ_T0031173.1 MGP_BALBcJ_G0018775.1 mouse_genomes_project 11 81363735 81399714 + MGP_BALBcJ_P0031173 Unc45b protein_coding protein_coding MGP_BALBcJ_T0031174.1 MGP_BALBcJ_G0018775.1 mouse_genomes_project 11 81364438 81399714 + MGP_BALBcJ_P0031174 Unc45b protein_coding protein_coding MGP_BALBcJ_T0031175.1 MGP_BALBcJ_G0018775.1 mouse_genomes_project 11 81364438 81399714 + MGP_BALBcJ_P0031175 Unc45b protein_coding protein_coding MGP_BALBcJ_T0031176.1 MGP_BALBcJ_G0018775.1 mouse_genomes_project 11 81383362 81384149 + Unc45b protein_coding processed_transcript MGP_BALBcJ_T0031177.1 MGP_BALBcJ_G0018775.1 mouse_genomes_project 11 81389912 81394068 + Unc45b protein_coding processed_transcript MGP_BALBcJ_T0032872.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240092 103339811 + MGP_BALBcJ_P0032872 protein_coding protein_coding MGP_BALBcJ_T0032873.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240181 103302997 + protein_coding retained_intron MGP_BALBcJ_T0032874.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240186 103314161 + MGP_BALBcJ_P0032874 protein_coding protein_coding MGP_BALBcJ_T0032875.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240217 103336159 + MGP_BALBcJ_P0032875 protein_coding protein_coding MGP_BALBcJ_T0032876.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240275 103314245 + MGP_BALBcJ_P0032876 protein_coding protein_coding MGP_BALBcJ_T0032877.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240281 103314221 + protein_coding processed_transcript MGP_BALBcJ_T0032878.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240283 103302604 + MGP_BALBcJ_P0032878 protein_coding protein_coding MGP_BALBcJ_T0032879.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103240286 103335943 + MGP_BALBcJ_P0032879 protein_coding protein_coding MGP_BALBcJ_T0032880.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103290322 103335911 + MGP_BALBcJ_P0032880 protein_coding protein_coding MGP_BALBcJ_T0032881.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103290322 103335911 + MGP_BALBcJ_P0032881 protein_coding protein_coding MGP_BALBcJ_T0032882.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103325533 103335965 + protein_coding processed_transcript MGP_BALBcJ_T0032883.1 MGP_BALBcJ_G0019216.1 mouse_genomes_project 11 103329458 103335934 + protein_coding processed_transcript MGP_BALBcJ_T0028020.1 MGP_BALBcJ_G0017984.1 mouse_genomes_project 11 8279249 8456494 - MGP_BALBcJ_P0028020 Zpbp protein_coding protein_coding MGP_BALBcJ_T0028957.1 MGP_BALBcJ_G0018225.1 mouse_genomes_project 11 50107233 50114987 + 9530068E07Rik protein_coding processed_transcript MGP_BALBcJ_T0028958.1 MGP_BALBcJ_G0018225.1 mouse_genomes_project 11 50107233 50119470 + MGP_BALBcJ_P0028958 9530068E07Rik protein_coding protein_coding MGP_BALBcJ_T0028959.1 MGP_BALBcJ_G0018225.1 mouse_genomes_project 11 50107233 50119465 + MGP_BALBcJ_P0028959 9530068E07Rik protein_coding protein_coding MGP_BALBcJ_T0028960.1 MGP_BALBcJ_G0018225.1 mouse_genomes_project 11 50107451 50114019 + 9530068E07Rik protein_coding processed_transcript MGP_BALBcJ_T0033696.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116071030 116093472 + MGP_BALBcJ_P0033696 Mfsd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033697.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116071884 116077533 + Mfsd11 protein_coding retained_intron MGP_BALBcJ_T0033698.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072063 116072648 + Mfsd11 protein_coding processed_transcript MGP_BALBcJ_T0033699.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072351 116093479 + MGP_BALBcJ_P0033699 Mfsd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033700.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072368 116072846 + Mfsd11 protein_coding retained_intron MGP_BALBcJ_T0033701.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072409 116094217 + MGP_BALBcJ_P0033701 Mfsd11 protein_coding protein_coding MGP_BALBcJ_T0033702.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072418 116073306 + Mfsd11 protein_coding retained_intron MGP_BALBcJ_T0033703.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072484 116094217 + MGP_BALBcJ_P0033703 Mfsd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033704.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072615 116092927 + MGP_BALBcJ_P0033704 Mfsd11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0033705.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116072667 116092705 + MGP_BALBcJ_P0033705 Mfsd11 protein_coding protein_coding MGP_BALBcJ_T0033706.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116077558 116080111 + Mfsd11 protein_coding retained_intron MGP_BALBcJ_T0033707.1 MGP_BALBcJ_G0019386.1 mouse_genomes_project 11 116086827 116092597 + Mfsd11 protein_coding processed_transcript MGP_BALBcJ_T0030416.1 MGP_BALBcJ_G0018579.1 mouse_genomes_project 11 70631279 70633837 + MGP_BALBcJ_P0030416 Ggt6 protein_coding protein_coding MGP_BALBcJ_T0030417.1 MGP_BALBcJ_G0018579.1 mouse_genomes_project 11 70631284 70633835 + MGP_BALBcJ_P0030417 Ggt6 protein_coding protein_coding MGP_BALBcJ_T0031414.1 MGP_BALBcJ_G0018839.1 mouse_genomes_project 11 85644841 85664376 - MGP_BALBcJ_P0031414 Prr11 protein_coding protein_coding MGP_BALBcJ_T0031715.1 MGP_BALBcJ_G0018911.1 mouse_genomes_project 11 93660894 93677654 + MGP_BALBcJ_P0031715 Col1a1 protein_coding protein_coding MGP_BALBcJ_T0031716.1 MGP_BALBcJ_G0018911.1 mouse_genomes_project 11 93662357 93662775 + Col1a1 protein_coding processed_transcript MGP_BALBcJ_T0031717.1 MGP_BALBcJ_G0018911.1 mouse_genomes_project 11 93663683 93664413 + Col1a1 protein_coding retained_intron MGP_BALBcJ_T0031718.1 MGP_BALBcJ_G0018911.1 mouse_genomes_project 11 93670038 93670700 + Col1a1 protein_coding retained_intron MGP_BALBcJ_T0029181.1 MGP_BALBcJ_G0018286.1 mouse_genomes_project 11 56026685 56034770 + MGP_BALBcJ_P0029181 Igtp protein_coding protein_coding MGP_BALBcJ_T0029182.1 MGP_BALBcJ_G0018286.1 mouse_genomes_project 11 56026715 56034744 + MGP_BALBcJ_P0029182 Igtp protein_coding protein_coding MGP_BALBcJ_T0029183.1 MGP_BALBcJ_G0018286.1 mouse_genomes_project 11 56026717 56034754 + MGP_BALBcJ_P0029183 Igtp protein_coding protein_coding MGP_BALBcJ_T0034034.1 MGP_BALBcJ_G0019454.1 mouse_genomes_project 11 119842838 119846359 - MGP_BALBcJ_P0034034 Arhgdia protein_coding protein_coding MGP_BALBcJ_T0034035.1 MGP_BALBcJ_G0019454.1 mouse_genomes_project 11 119842843 119846115 - MGP_BALBcJ_P0034035 Arhgdia protein_coding protein_coding MGP_BALBcJ_T0029611.1 MGP_BALBcJ_G0018398.1 mouse_genomes_project 11 60620304 60666057 - MGP_BALBcJ_P0029611 Lrrc75a protein_coding protein_coding MGP_BALBcJ_T0029612.1 MGP_BALBcJ_G0018398.1 mouse_genomes_project 11 60621243 60665574 - Lrrc75a protein_coding processed_transcript MGP_BALBcJ_T0029613.1 MGP_BALBcJ_G0018398.1 mouse_genomes_project 11 60621447 60665583 - Lrrc75a protein_coding processed_transcript MGP_BALBcJ_T0098828.1 MGP_BALBcJ_G0036879.1 mouse_genomes_project 11 118118929 118119893 - Gm11749 sense_intronic sense_intronic MGP_BALBcJ_T0006221.1 MGP_BALBcJ_G0005200.1 mouse_genomes_project 11 58861772 58869810 + Gm26534 lincRNA lincRNA MGP_BALBcJ_T0012663.1 MGP_BALBcJ_G0010760.1 mouse_genomes_project 11 77621755 77622203 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003109.1 MGP_BALBcJ_G0002888.1 mouse_genomes_project 11 13829427 13844775 - Egfros antisense antisense MGP_BALBcJ_T0029533.1 MGP_BALBcJ_G0018385.1 mouse_genomes_project 11 59686576 59689344 + Fam83g protein_coding processed_transcript MGP_BALBcJ_T0029534.1 MGP_BALBcJ_G0018385.1 mouse_genomes_project 11 59686904 59712417 + MGP_BALBcJ_P0029534 Fam83g protein_coding protein_coding MGP_BALBcJ_T0031907.1 MGP_BALBcJ_G0018964.1 mouse_genomes_project 11 95848859 95867504 + MGP_BALBcJ_P0031907 Osbpl7 protein_coding protein_coding MGP_BALBcJ_T0031908.1 MGP_BALBcJ_G0018964.1 mouse_genomes_project 11 95849051 95851055 + Osbpl7 protein_coding processed_transcript MGP_BALBcJ_T0031909.1 MGP_BALBcJ_G0018964.1 mouse_genomes_project 11 95849051 95867504 + MGP_BALBcJ_P0031909 Osbpl7 protein_coding protein_coding MGP_BALBcJ_T0031910.1 MGP_BALBcJ_G0018964.1 mouse_genomes_project 11 95850557 95851207 + Osbpl7 protein_coding retained_intron MGP_BALBcJ_T0031911.1 MGP_BALBcJ_G0018964.1 mouse_genomes_project 11 95851597 95855529 + Osbpl7 protein_coding retained_intron MGP_BALBcJ_T0031912.1 MGP_BALBcJ_G0018964.1 mouse_genomes_project 11 95865482 95866871 + Osbpl7 protein_coding retained_intron MGP_BALBcJ_T0028629.1 MGP_BALBcJ_G0018132.1 mouse_genomes_project 11 43567689 43572033 + MGP_BALBcJ_P0028629 Fndc9 protein_coding protein_coding MGP_BALBcJ_T0017131.1 MGP_BALBcJ_G0015096.1 mouse_genomes_project 11 20129320 20136705 + Gm12059 processed_transcript processed_transcript MGP_BALBcJ_T0003310.1 MGP_BALBcJ_G0003055.1 mouse_genomes_project 11 107605641 107610205 - Cep112os1 antisense antisense MGP_BALBcJ_T0028003.1 MGP_BALBcJ_G0017980.1 mouse_genomes_project 11 6015958 6036480 + MGP_BALBcJ_P0028003 Gm11992 protein_coding protein_coding MGP_BALBcJ_T0034386.1 MGP_BALBcJ_G0019540.1 mouse_genomes_project 12 8313118 8338166 - MGP_BALBcJ_P0034386 Gen1 protein_coding protein_coding MGP_BALBcJ_T0000092.1 MGP_BALBcJ_G0000069.1 mouse_genomes_project 12 113050089 113050523 - MGP_BALBcJ_P0000092 Ighv12-3 IG_V_gene IG_V_gene MGP_BALBcJ_T0000861.1 MGP_BALBcJ_G0000793.1 mouse_genomes_project 12 100577734 100579873 - TEC TEC MGP_BALBcJ_T0035078.1 MGP_BALBcJ_G0019795.1 mouse_genomes_project 12 74084865 74087624 + MGP_BALBcJ_P0035078 Hspa2 protein_coding protein_coding MGP_BALBcJ_T0034469.1 MGP_BALBcJ_G0019571.1 mouse_genomes_project 12 21831744 21832195 - MGP_BALBcJ_P0034469 Gm16372 protein_coding protein_coding MGP_BALBcJ_T0034563.1 MGP_BALBcJ_G0019606.1 mouse_genomes_project 12 28861335 28902029 - MGP_BALBcJ_P0034563 Slc26a4 protein_coding protein_coding MGP_BALBcJ_T0012781.1 MGP_BALBcJ_G0010878.1 mouse_genomes_project 12 42232726 42233857 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034774.1 MGP_BALBcJ_G0019689.1 mouse_genomes_project 12 53019135 53020793 + MGP_BALBcJ_P0034774 Aldoart2 protein_coding protein_coding MGP_BALBcJ_T0012834.1 MGP_BALBcJ_G0010931.1 mouse_genomes_project 12 111889603 111890057 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035118.1 MGP_BALBcJ_G0019813.1 mouse_genomes_project 12 76647435 76694039 - MGP_BALBcJ_P0035118 Tmem229b protein_coding protein_coding MGP_BALBcJ_T0035119.1 MGP_BALBcJ_G0019813.1 mouse_genomes_project 12 76647435 76670000 - MGP_BALBcJ_P0035119 Tmem229b protein_coding protein_coding MGP_BALBcJ_T0035120.1 MGP_BALBcJ_G0019813.1 mouse_genomes_project 12 76647437 76667262 - MGP_BALBcJ_P0035120 Tmem229b protein_coding protein_coding MGP_BALBcJ_T0035121.1 MGP_BALBcJ_G0019813.1 mouse_genomes_project 12 76647440 76693689 - MGP_BALBcJ_P0035121 Tmem229b protein_coding protein_coding MGP_BALBcJ_T0035122.1 MGP_BALBcJ_G0019813.1 mouse_genomes_project 12 76659775 76667277 - Tmem229b protein_coding processed_transcript MGP_BALBcJ_T0035123.1 MGP_BALBcJ_G0019813.1 mouse_genomes_project 12 76664268 76693075 - Tmem229b protein_coding processed_transcript MGP_BALBcJ_T0006405.1 MGP_BALBcJ_G0005337.1 mouse_genomes_project 12 78453218 78456080 + Gm26796 lincRNA lincRNA MGP_BALBcJ_T0000237.1 MGP_BALBcJ_G0000178.1 mouse_genomes_project 12 112344089 112344405 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0009815.1 MGP_BALBcJ_G0007940.1 mouse_genomes_project 12 107987024 107987115 + Mir431 miRNA miRNA MGP_BALBcJ_T0034763.1 MGP_BALBcJ_G0019686.1 mouse_genomes_project 12 52747697 52834923 + MGP_BALBcJ_P0034763 1110008L16Rik protein_coding protein_coding MGP_BALBcJ_T0034764.1 MGP_BALBcJ_G0019686.1 mouse_genomes_project 12 52750757 52834999 + MGP_BALBcJ_P0034764 1110008L16Rik protein_coding protein_coding MGP_BALBcJ_T0034765.1 MGP_BALBcJ_G0019686.1 mouse_genomes_project 12 52750870 52757639 + 1110008L16Rik protein_coding retained_intron MGP_BALBcJ_T0034766.1 MGP_BALBcJ_G0019686.1 mouse_genomes_project 12 52751363 52835016 + MGP_BALBcJ_P0034766 1110008L16Rik protein_coding protein_coding MGP_BALBcJ_T0034767.1 MGP_BALBcJ_G0019686.1 mouse_genomes_project 12 52751381 52835036 + MGP_BALBcJ_P0034767 1110008L16Rik protein_coding protein_coding MGP_BALBcJ_T0034768.1 MGP_BALBcJ_G0019686.1 mouse_genomes_project 12 52751406 52835016 + MGP_BALBcJ_P0034768 1110008L16Rik protein_coding protein_coding MGP_BALBcJ_T0034641.1 MGP_BALBcJ_G0019640.1 mouse_genomes_project 12 34587844 34938840 + MGP_BALBcJ_P0034641 Agmo protein_coding protein_coding MGP_BALBcJ_T0034642.1 MGP_BALBcJ_G0019640.1 mouse_genomes_project 12 34587943 34597668 + MGP_BALBcJ_P0034642 Agmo protein_coding protein_coding MGP_BALBcJ_T0034643.1 MGP_BALBcJ_G0019640.1 mouse_genomes_project 12 34587972 34757012 + Agmo protein_coding retained_intron MGP_BALBcJ_T0034644.1 MGP_BALBcJ_G0019640.1 mouse_genomes_project 12 34588053 34776865 + MGP_BALBcJ_P0034644 Agmo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034645.1 MGP_BALBcJ_G0019640.1 mouse_genomes_project 12 34588235 34921805 + MGP_BALBcJ_P0034645 Agmo protein_coding protein_coding MGP_BALBcJ_T0034322.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1779769 1791683 - Mfsd2b protein_coding retained_intron MGP_BALBcJ_T0034323.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1779769 1791686 - MGP_BALBcJ_P0034323 Mfsd2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034324.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1780401 1791673 - Mfsd2b protein_coding retained_intron MGP_BALBcJ_T0034325.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1780401 1791686 - MGP_BALBcJ_P0034325 Mfsd2b protein_coding protein_coding MGP_BALBcJ_T0034326.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1780401 1791686 - MGP_BALBcJ_P0034326 Mfsd2b protein_coding protein_coding MGP_BALBcJ_T0034327.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1780894 1791687 - Mfsd2b protein_coding retained_intron MGP_BALBcJ_T0034328.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1784563 1786589 - Mfsd2b protein_coding retained_intron MGP_BALBcJ_T0034329.1 MGP_BALBcJ_G0019519.1 mouse_genomes_project 12 1786275 1791687 - MGP_BALBcJ_P0034329 Mfsd2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000111.1 MGP_BALBcJ_G0000084.1 mouse_genomes_project 12 114513005 114513435 - MGP_BALBcJ_P0000111 Ighv1-67 IG_V_gene IG_V_gene MGP_BALBcJ_T0017253.1 MGP_BALBcJ_G0015163.1 mouse_genomes_project 12 18470611 18474431 - Gm20535 processed_transcript processed_transcript MGP_BALBcJ_T0035762.1 MGP_BALBcJ_G0020009.1 mouse_genomes_project 12 102225499 102233504 - MGP_BALBcJ_P0035762 Serpina3c protein_coding protein_coding MGP_BALBcJ_T0099334.1 MGP_BALBcJ_G0037370.1 mouse_genomes_project 12 66725324 66725428 - Gm24499 snRNA snRNA MGP_BALBcJ_T0100558.1 MGP_BALBcJ_G0038594.1 mouse_genomes_project 12 14700410 14700546 + Gm22748 snoRNA snoRNA MGP_BALBcJ_T0006459.1 MGP_BALBcJ_G0005377.1 mouse_genomes_project 12 108092148 108099150 + B830012L14Rik lincRNA lincRNA MGP_BALBcJ_T0000105.1 MGP_BALBcJ_G0000080.1 mouse_genomes_project 12 113392195 113392629 - MGP_BALBcJ_P0000105 Ighv1-9 IG_V_gene IG_V_gene MGP_BALBcJ_T0000106.1 MGP_BALBcJ_G0000080.1 mouse_genomes_project 12 113392195 113392629 - MGP_BALBcJ_P0000106 Ighv1-9 IG_V_gene IG_V_gene MGP_BALBcJ_T0034397.1 MGP_BALBcJ_G0019548.1 mouse_genomes_project 12 10317514 10345382 - MGP_BALBcJ_P0034397 Ddx1 protein_coding protein_coding MGP_BALBcJ_T0035796.1 MGP_BALBcJ_G0020032.1 mouse_genomes_project 12 103886986 103889237 + MGP_BALBcJ_P0035796 Bdkrb1 protein_coding protein_coding MGP_BALBcJ_T0035797.1 MGP_BALBcJ_G0020032.1 mouse_genomes_project 12 103887020 103888880 + MGP_BALBcJ_P0035797 Bdkrb1 protein_coding protein_coding MGP_BALBcJ_T0035798.1 MGP_BALBcJ_G0020032.1 mouse_genomes_project 12 103887988 103889326 + MGP_BALBcJ_P0035798 Bdkrb1 protein_coding protein_coding MGP_BALBcJ_T0034757.1 MGP_BALBcJ_G0019682.1 mouse_genomes_project 12 52394699 52429991 - MGP_BALBcJ_P0034757 2700097O09Rik protein_coding protein_coding MGP_BALBcJ_T0034758.1 MGP_BALBcJ_G0019682.1 mouse_genomes_project 12 52394714 52403355 - 2700097O09Rik protein_coding retained_intron MGP_BALBcJ_T0034759.1 MGP_BALBcJ_G0019682.1 mouse_genomes_project 12 52403007 52429989 - 2700097O09Rik protein_coding retained_intron MGP_BALBcJ_T0034558.1 MGP_BALBcJ_G0019605.1 mouse_genomes_project 12 28825292 28841339 - MGP_BALBcJ_P0034558 Cbll1 protein_coding protein_coding MGP_BALBcJ_T0034559.1 MGP_BALBcJ_G0019605.1 mouse_genomes_project 12 28825399 28841339 - MGP_BALBcJ_P0034559 Cbll1 protein_coding protein_coding MGP_BALBcJ_T0034560.1 MGP_BALBcJ_G0019605.1 mouse_genomes_project 12 28827613 28841339 - MGP_BALBcJ_P0034560 Cbll1 protein_coding protein_coding MGP_BALBcJ_T0034561.1 MGP_BALBcJ_G0019605.1 mouse_genomes_project 12 28828377 28841280 - MGP_BALBcJ_P0034561 Cbll1 protein_coding protein_coding MGP_BALBcJ_T0034562.1 MGP_BALBcJ_G0019605.1 mouse_genomes_project 12 28828387 28841278 - MGP_BALBcJ_P0034562 Cbll1 protein_coding protein_coding MGP_BALBcJ_T0035985.1 MGP_BALBcJ_G0020088.1 mouse_genomes_project 12 110428651 110430858 - MGP_BALBcJ_P0035985 Rd3l protein_coding protein_coding MGP_BALBcJ_T0035986.1 MGP_BALBcJ_G0020088.1 mouse_genomes_project 12 110428652 110429684 - MGP_BALBcJ_P0035986 Rd3l protein_coding protein_coding MGP_BALBcJ_T0035987.1 MGP_BALBcJ_G0020088.1 mouse_genomes_project 12 110428685 110430595 - MGP_BALBcJ_P0035987 Rd3l protein_coding protein_coding MGP_BALBcJ_T0035988.1 MGP_BALBcJ_G0020088.1 mouse_genomes_project 12 110428729 110430010 - MGP_BALBcJ_P0035988 Rd3l protein_coding protein_coding MGP_BALBcJ_T0035989.1 MGP_BALBcJ_G0020088.1 mouse_genomes_project 12 110428731 110430643 - MGP_BALBcJ_P0035989 Rd3l protein_coding protein_coding MGP_BALBcJ_T0003392.1 MGP_BALBcJ_G0003115.1 mouse_genomes_project 12 81433891 81435776 - Gm29361 antisense antisense MGP_BALBcJ_T0009831.1 MGP_BALBcJ_G0007956.1 mouse_genomes_project 12 108108459 108108571 - Gm25750 miRNA miRNA MGP_BALBcJ_T0099344.1 MGP_BALBcJ_G0037380.1 mouse_genomes_project 12 78608933 78609040 + Gm23298 snRNA snRNA MGP_BALBcJ_T0035513.1 MGP_BALBcJ_G0019934.1 mouse_genomes_project 12 86374213 86374647 + MGP_BALBcJ_P0035513 protein_coding protein_coding MGP_BALBcJ_T0034566.1 MGP_BALBcJ_G0019608.1 mouse_genomes_project 12 28985176 28999935 - MGP_BALBcJ_P0034566 Dus4l protein_coding protein_coding MGP_BALBcJ_T0011302.1 MGP_BALBcJ_G0009427.1 mouse_genomes_project 12 44145969 44146218 - Gm25051 misc_RNA misc_RNA MGP_BALBcJ_T0034979.1 MGP_BALBcJ_G0019762.1 mouse_genomes_project 12 69837387 69861345 - Rtn1 protein_coding processed_transcript MGP_BALBcJ_T0034980.1 MGP_BALBcJ_G0019762.1 mouse_genomes_project 12 69837387 70030804 - MGP_BALBcJ_P0034980 Rtn1 protein_coding protein_coding MGP_BALBcJ_T0034981.1 MGP_BALBcJ_G0019762.1 mouse_genomes_project 12 69837388 69862330 - MGP_BALBcJ_P0034981 Rtn1 protein_coding protein_coding MGP_BALBcJ_T0034982.1 MGP_BALBcJ_G0019762.1 mouse_genomes_project 12 69837924 69862330 - MGP_BALBcJ_P0034982 Rtn1 protein_coding protein_coding MGP_BALBcJ_T0034983.1 MGP_BALBcJ_G0019762.1 mouse_genomes_project 12 69848854 69862292 - Rtn1 protein_coding processed_transcript MGP_BALBcJ_T0035091.1 MGP_BALBcJ_G0019803.1 mouse_genomes_project 12 74466558 74490666 - MGP_BALBcJ_P0035091 Rab15 protein_coding protein_coding MGP_BALBcJ_T0035092.1 MGP_BALBcJ_G0019803.1 mouse_genomes_project 12 74468477 74469438 - Rab15 protein_coding retained_intron MGP_BALBcJ_T0035093.1 MGP_BALBcJ_G0019803.1 mouse_genomes_project 12 74468725 74474082 - MGP_BALBcJ_P0035093 Rab15 protein_coding protein_coding MGP_BALBcJ_T0035094.1 MGP_BALBcJ_G0019803.1 mouse_genomes_project 12 74468933 74491257 - MGP_BALBcJ_P0035094 Rab15 protein_coding protein_coding MGP_BALBcJ_T0035095.1 MGP_BALBcJ_G0019803.1 mouse_genomes_project 12 74469169 74487445 - MGP_BALBcJ_P0035095 Rab15 protein_coding protein_coding MGP_BALBcJ_T0035096.1 MGP_BALBcJ_G0019803.1 mouse_genomes_project 12 74471483 74490811 - Rab15 protein_coding retained_intron MGP_BALBcJ_T0000031.1 MGP_BALBcJ_G0000024.1 mouse_genomes_project 12 111960243 111960272 - IG_D_pseudogene IG_D_pseudogene MGP_BALBcJ_T0035853.1 MGP_BALBcJ_G0020049.1 mouse_genomes_project 12 107187078 107197089 - MGP_BALBcJ_P0035853 Slc25a29 protein_coding protein_coding MGP_BALBcJ_T0035854.1 MGP_BALBcJ_G0020049.1 mouse_genomes_project 12 107188429 107192823 - Slc25a29 protein_coding retained_intron MGP_BALBcJ_T0035855.1 MGP_BALBcJ_G0020049.1 mouse_genomes_project 12 107192149 107197026 - Slc25a29 protein_coding retained_intron MGP_BALBcJ_T0100567.1 MGP_BALBcJ_G0038603.1 mouse_genomes_project 12 33724417 33724527 - Gm25438 snoRNA snoRNA MGP_BALBcJ_T0034514.1 MGP_BALBcJ_G0019591.1 mouse_genomes_project 12 26128421 26245132 + MGP_BALBcJ_P0034514 Tssc1 protein_coding protein_coding MGP_BALBcJ_T0011298.1 MGP_BALBcJ_G0009423.1 mouse_genomes_project 12 8772072 8772380 - Gm23781 misc_RNA misc_RNA MGP_BALBcJ_T0034711.1 MGP_BALBcJ_G0019660.1 mouse_genomes_project 12 46679085 46679646 + MGP_BALBcJ_P0034711 Gm9804 protein_coding protein_coding MGP_BALBcJ_T0036028.1 MGP_BALBcJ_G0020105.1 mouse_genomes_project 12 111387845 111408752 - MGP_BALBcJ_P0036028 Jag2 protein_coding protein_coding MGP_BALBcJ_T0000093.1 MGP_BALBcJ_G0000070.1 mouse_genomes_project 12 113086769 113087227 - MGP_BALBcJ_P0000093 Ighv6-3 IG_V_gene IG_V_gene MGP_BALBcJ_T0017273.1 MGP_BALBcJ_G0015175.1 mouse_genomes_project 12 100663706 100718512 - Gm28373 processed_transcript processed_transcript MGP_BALBcJ_T0034808.1 MGP_BALBcJ_G0019704.1 mouse_genomes_project 12 56420435 56474491 - MGP_BALBcJ_P0034808 Sec23a protein_coding protein_coding MGP_BALBcJ_T0034809.1 MGP_BALBcJ_G0019704.1 mouse_genomes_project 12 56421756 56469709 - MGP_BALBcJ_P0034809 Sec23a protein_coding protein_coding MGP_BALBcJ_T0034810.1 MGP_BALBcJ_G0019704.1 mouse_genomes_project 12 56428659 56433605 - Sec23a protein_coding retained_intron MGP_BALBcJ_T0034811.1 MGP_BALBcJ_G0019704.1 mouse_genomes_project 12 56435321 56444797 - Sec23a protein_coding retained_intron MGP_BALBcJ_T0034812.1 MGP_BALBcJ_G0019704.1 mouse_genomes_project 12 56469127 56474491 - Sec23a protein_coding retained_intron MGP_BALBcJ_T0012818.1 MGP_BALBcJ_G0010915.1 mouse_genomes_project 12 94008891 94009245 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035568.1 MGP_BALBcJ_G0019944.1 mouse_genomes_project 12 96171453 96230822 - MGP_BALBcJ_P0035568 Galc protein_coding protein_coding MGP_BALBcJ_T0035945.1 MGP_BALBcJ_G0020076.1 mouse_genomes_project 12 109968575 109978571 + MGP_BALBcJ_P0035945 Eif5 protein_coding unknown_likely_coding MGP_BALBcJ_T0035946.1 MGP_BALBcJ_G0020076.1 mouse_genomes_project 12 109968956 109985731 + MGP_BALBcJ_P0035946 Eif5 protein_coding protein_coding MGP_BALBcJ_T0035947.1 MGP_BALBcJ_G0020076.1 mouse_genomes_project 12 109979429 109985426 + MGP_BALBcJ_P0035947 Eif5 protein_coding unknown_likely_coding MGP_BALBcJ_T0034876.1 MGP_BALBcJ_G0019724.1 mouse_genomes_project 12 66741946 66752146 + MGP_BALBcJ_P0034876 Lrr1 protein_coding protein_coding MGP_BALBcJ_T0099313.1 MGP_BALBcJ_G0037349.1 mouse_genomes_project 12 18576368 18576467 + Gm22766 snRNA snRNA MGP_BALBcJ_T0034458.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18544449 18594898 - MGP_BALBcJ_P0034458 Adam17 protein_coding protein_coding MGP_BALBcJ_T0034459.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18544457 18594898 - MGP_BALBcJ_P0034459 Adam17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034460.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18544457 18594898 - MGP_BALBcJ_P0034460 Adam17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034461.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18544457 18594937 - MGP_BALBcJ_P0034461 Adam17 protein_coding protein_coding MGP_BALBcJ_T0034462.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18544615 18594737 - MGP_BALBcJ_P0034462 Adam17 protein_coding unknown_likely_coding MGP_BALBcJ_T0034463.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18546451 18550269 - Adam17 protein_coding processed_transcript MGP_BALBcJ_T0034464.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18548919 18566217 - Adam17 protein_coding retained_intron MGP_BALBcJ_T0034465.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18551051 18554310 - Adam17 protein_coding retained_intron MGP_BALBcJ_T0034466.1 MGP_BALBcJ_G0019569.1 mouse_genomes_project 12 18571984 18594839 - MGP_BALBcJ_P0034466 Adam17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100555.1 MGP_BALBcJ_G0038591.1 mouse_genomes_project 12 9111809 9111938 + Gm25610 snoRNA snoRNA MGP_BALBcJ_T0006404.1 MGP_BALBcJ_G0005336.1 mouse_genomes_project 12 78200320 78209286 - Gm26777 lincRNA lincRNA MGP_BALBcJ_T0011312.1 MGP_BALBcJ_G0009437.1 mouse_genomes_project 12 84683030 84683332 + Gm25888 misc_RNA misc_RNA MGP_BALBcJ_T0035041.1 MGP_BALBcJ_G0019785.1 mouse_genomes_project 12 73108906 73255609 - MGP_BALBcJ_P0035041 Ppp2r5e protein_coding protein_coding MGP_BALBcJ_T0012791.1 MGP_BALBcJ_G0010888.1 mouse_genomes_project 12 54992644 54994228 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000254.1 MGP_BALBcJ_G0000195.1 mouse_genomes_project 12 113324676 113324969 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0099323.1 MGP_BALBcJ_G0037359.1 mouse_genomes_project 12 52066922 52067086 + Gm25679 snRNA snRNA MGP_BALBcJ_T0003390.1 MGP_BALBcJ_G0003113.1 mouse_genomes_project 12 80710731 80717533 - 1700085C21Rik antisense antisense MGP_BALBcJ_T0035671.1 MGP_BALBcJ_G0019974.1 mouse_genomes_project 12 100433228 100462610 + MGP_BALBcJ_P0035671 Golga5 protein_coding protein_coding MGP_BALBcJ_T0035672.1 MGP_BALBcJ_G0019974.1 mouse_genomes_project 12 100434008 100462610 + MGP_BALBcJ_P0035672 Golga5 protein_coding protein_coding MGP_BALBcJ_T0034312.1 MGP_BALBcJ_G0019512.1 mouse_genomes_project 12 1609567 1610092 - MGP_BALBcJ_P0034312 Gm17541 protein_coding protein_coding MGP_BALBcJ_T0000033.1 MGP_BALBcJ_G0000026.1 mouse_genomes_project 12 111993467 111993496 - IG_D_pseudogene IG_D_pseudogene MGP_BALBcJ_T0009763.1 MGP_BALBcJ_G0007888.1 mouse_genomes_project 12 27921643 27921850 - Gm25243 miRNA miRNA MGP_BALBcJ_T0034724.1 MGP_BALBcJ_G0019666.1 mouse_genomes_project 12 48999480 49048149 + MGP_BALBcJ_P0034724 Ap4s1 protein_coding protein_coding MGP_BALBcJ_T0000246.1 MGP_BALBcJ_G0000187.1 mouse_genomes_project 12 112965674 112965968 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0100597.1 MGP_BALBcJ_G0038633.1 mouse_genomes_project 12 100227426 100227642 - Gm25203 snoRNA snoRNA MGP_BALBcJ_T0034856.1 MGP_BALBcJ_G0019718.1 mouse_genomes_project 12 62601887 62613474 - MGP_BALBcJ_P0034856 Fkbp3 protein_coding protein_coding MGP_BALBcJ_T0035022.1 MGP_BALBcJ_G0019775.1 mouse_genomes_project 12 70999677 71008412 - MGP_BALBcJ_P0035022 D830013O20Rik protein_coding protein_coding MGP_BALBcJ_T0035507.1 MGP_BALBcJ_G0019928.1 mouse_genomes_project 12 86165442 86177554 - MGP_BALBcJ_P0035507 Gm10436 protein_coding protein_coding MGP_BALBcJ_T0034245.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468323 680976 + MGP_BALBcJ_P0034245 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034246.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468333 680503 + MGP_BALBcJ_P0034246 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034247.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468359 680464 + MGP_BALBcJ_P0034247 Dtnb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034248.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468375 680503 + MGP_BALBcJ_P0034248 Dtnb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034249.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468376 541681 + MGP_BALBcJ_P0034249 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034250.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468377 619651 + Dtnb protein_coding retained_intron MGP_BALBcJ_T0034251.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468395 680500 + MGP_BALBcJ_P0034251 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034252.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468405 680247 + MGP_BALBcJ_P0034252 Dtnb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034253.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468407 680498 + MGP_BALBcJ_P0034253 Dtnb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034254.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468408 555071 + Dtnb protein_coding processed_transcript MGP_BALBcJ_T0034255.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468412 680500 + MGP_BALBcJ_P0034255 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034256.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468417 680500 + MGP_BALBcJ_P0034256 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034257.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468465 680610 + MGP_BALBcJ_P0034257 Dtnb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034258.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468478 493325 + MGP_BALBcJ_P0034258 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034259.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468562 650715 + MGP_BALBcJ_P0034259 Dtnb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034260.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 468926 680496 + MGP_BALBcJ_P0034260 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034261.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 485782 680500 + MGP_BALBcJ_P0034261 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034262.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 527728 680500 + MGP_BALBcJ_P0034262 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034263.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 580453 617530 + Dtnb protein_coding retained_intron MGP_BALBcJ_T0034264.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 618101 648287 + Dtnb protein_coding processed_transcript MGP_BALBcJ_T0034265.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 648101 680247 + Dtnb protein_coding retained_intron MGP_BALBcJ_T0034266.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 648355 680503 + MGP_BALBcJ_P0034266 Dtnb protein_coding protein_coding MGP_BALBcJ_T0034267.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 673415 680503 + Dtnb protein_coding processed_transcript MGP_BALBcJ_T0034268.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 673625 680502 + Dtnb protein_coding retained_intron MGP_BALBcJ_T0034269.1 MGP_BALBcJ_G0019500.1 mouse_genomes_project 12 678648 680503 + Dtnb protein_coding retained_intron MGP_BALBcJ_T0099319.1 MGP_BALBcJ_G0037355.1 mouse_genomes_project 12 49897926 49898033 - Gm23296 snRNA snRNA MGP_BALBcJ_T0009857.1 MGP_BALBcJ_G0007982.1 mouse_genomes_project 12 108130806 108130877 + Mir134 miRNA miRNA MGP_BALBcJ_T0035745.1 MGP_BALBcJ_G0020002.1 mouse_genomes_project 12 101797285 102008926 - MGP_BALBcJ_P0035745 protein_coding protein_coding MGP_BALBcJ_T0035748.1 MGP_BALBcJ_G0020002.1 mouse_genomes_project 12 101973423 101984030 - MGP_BALBcJ_P0035748 protein_coding protein_coding MGP_BALBcJ_T0009798.1 MGP_BALBcJ_G0007923.1 mouse_genomes_project 12 100676041 100676134 - Mir1936 miRNA miRNA MGP_BALBcJ_T0098830.1 MGP_BALBcJ_G0036881.1 mouse_genomes_project 12 42269075 42280971 - Gm15902 sense_intronic sense_intronic MGP_BALBcJ_T0035508.1 MGP_BALBcJ_G0019929.1 mouse_genomes_project 12 86165448 86177479 - MGP_BALBcJ_P0035508 Oog1 protein_coding protein_coding MGP_BALBcJ_T0006393.1 MGP_BALBcJ_G0005329.1 mouse_genomes_project 12 67817241 67823536 + F730035M05Rik lincRNA lincRNA MGP_BALBcJ_T0000856.1 MGP_BALBcJ_G0000788.1 mouse_genomes_project 12 80907712 80908514 - TEC TEC MGP_BALBcJ_T0035683.1 MGP_BALBcJ_G0019981.1 mouse_genomes_project 12 100744712 100749541 - MGP_BALBcJ_P0035683 AK010878 protein_coding protein_coding MGP_BALBcJ_T0035684.1 MGP_BALBcJ_G0019981.1 mouse_genomes_project 12 100748028 100749544 - MGP_BALBcJ_P0035684 AK010878 protein_coding protein_coding MGP_BALBcJ_T0009823.1 MGP_BALBcJ_G0007948.1 mouse_genomes_project 12 108008127 108008247 + Mir1188 miRNA miRNA MGP_BALBcJ_T0034648.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36138639 36226304 + MGP_BALBcJ_P0034648 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034649.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36139341 36228270 + MGP_BALBcJ_P0034649 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034650.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36139543 36225834 + MGP_BALBcJ_P0034650 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034651.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36139578 36141077 + MGP_BALBcJ_P0034651 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034652.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36139608 36195274 + MGP_BALBcJ_P0034652 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034653.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36140108 36225831 + MGP_BALBcJ_P0034653 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034654.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36140373 36227354 + Etv1 protein_coding retained_intron MGP_BALBcJ_T0034655.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36140389 36195186 + MGP_BALBcJ_P0034655 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034656.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36142733 36226231 + MGP_BALBcJ_P0034656 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034657.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36142744 36226016 + MGP_BALBcJ_P0034657 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034658.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36142772 36228258 + MGP_BALBcJ_P0034658 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034659.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36184727 36191232 + MGP_BALBcJ_P0034659 Etv1 protein_coding protein_coding MGP_BALBcJ_T0034660.1 MGP_BALBcJ_G0019642.1 mouse_genomes_project 12 36197413 36225771 + Etv1 protein_coding processed_transcript MGP_BALBcJ_T0009789.1 MGP_BALBcJ_G0007914.1 mouse_genomes_project 12 85150869 85150945 + miRNA miRNA MGP_BALBcJ_T0009873.1 MGP_BALBcJ_G0007998.1 mouse_genomes_project 12 110560064 110560149 + Mir3073a miRNA miRNA MGP_BALBcJ_T0035279.1 MGP_BALBcJ_G0019858.1 mouse_genomes_project 12 81758941 81786023 - MGP_BALBcJ_P0035279 Heatr4 protein_coding protein_coding MGP_BALBcJ_T0034905.1 MGP_BALBcJ_G0019738.1 mouse_genomes_project 12 67296841 67328079 + MGP_BALBcJ_P0034905 Atp5s protein_coding protein_coding MGP_BALBcJ_T0009832.1 MGP_BALBcJ_G0007957.1 mouse_genomes_project 12 108108483 108108544 + Mir380 miRNA miRNA MGP_BALBcJ_T0102183.1 MGP_BALBcJ_G0039999.1 mouse_genomes_project 12 102529256 102534784 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0034682.1 MGP_BALBcJ_G0019648.1 mouse_genomes_project 12 37677500 37799948 - MGP_BALBcJ_P0034682 Zfp277 protein_coding protein_coding MGP_BALBcJ_T0034683.1 MGP_BALBcJ_G0019648.1 mouse_genomes_project 12 37678012 37799927 - MGP_BALBcJ_P0034683 Zfp277 protein_coding protein_coding MGP_BALBcJ_T0009818.1 MGP_BALBcJ_G0007943.1 mouse_genomes_project 12 107990939 107991081 + Mir434 miRNA miRNA MGP_BALBcJ_T0100584.1 MGP_BALBcJ_G0038620.1 mouse_genomes_project 12 63110412 63110544 - Gm23948 snoRNA snoRNA MGP_BALBcJ_T0009816.1 MGP_BALBcJ_G0007941.1 mouse_genomes_project 12 107988196 107988320 + Mir433 miRNA miRNA MGP_BALBcJ_T0034390.1 MGP_BALBcJ_G0019544.1 mouse_genomes_project 12 8980874 8983266 - MGP_BALBcJ_P0034390 protein_coding protein_coding MGP_BALBcJ_T0000027.1 MGP_BALBcJ_G0000020.1 mouse_genomes_project 12 111962223 111962233 - MGP_BALBcJ_P0000027 Ighd5-3 IG_D_gene IG_D_gene MGP_BALBcJ_T0035277.1 MGP_BALBcJ_G0019856.1 mouse_genomes_project 12 81755050 81757396 + MGP_BALBcJ_P0035277 2410016O06Rik protein_coding protein_coding MGP_BALBcJ_T0000849.1 MGP_BALBcJ_G0000781.1 mouse_genomes_project 12 22917946 22956859 - TEC TEC MGP_BALBcJ_T0009834.1 MGP_BALBcJ_G0007959.1 mouse_genomes_project 12 108109188 108109274 + Mir323 miRNA miRNA MGP_BALBcJ_T0035175.1 MGP_BALBcJ_G0019835.1 mouse_genomes_project 12 78894652 79032004 - MGP_BALBcJ_P0035175 Slc8a3 protein_coding protein_coding MGP_BALBcJ_T0035176.1 MGP_BALBcJ_G0019835.1 mouse_genomes_project 12 78895015 79031799 - MGP_BALBcJ_P0035176 Slc8a3 protein_coding protein_coding MGP_BALBcJ_T0035177.1 MGP_BALBcJ_G0019835.1 mouse_genomes_project 12 78896185 79032020 - MGP_BALBcJ_P0035177 Slc8a3 protein_coding protein_coding MGP_BALBcJ_T0035178.1 MGP_BALBcJ_G0019835.1 mouse_genomes_project 12 78899136 78991519 - MGP_BALBcJ_P0035178 Slc8a3 protein_coding protein_coding MGP_BALBcJ_T0035179.1 MGP_BALBcJ_G0019835.1 mouse_genomes_project 12 78910766 79032020 - Slc8a3 protein_coding retained_intron MGP_BALBcJ_T0034760.1 MGP_BALBcJ_G0019683.1 mouse_genomes_project 12 52430343 52468886 + MGP_BALBcJ_P0034760 protein_coding unknown_likely_coding MGP_BALBcJ_T0100576.1 MGP_BALBcJ_G0038612.1 mouse_genomes_project 12 53692656 53692786 - Gm25917 snoRNA snoRNA MGP_BALBcJ_T0009791.1 MGP_BALBcJ_G0007916.1 mouse_genomes_project 12 87357883 87358025 - Gm27313 miRNA miRNA MGP_BALBcJ_T0035434.1 MGP_BALBcJ_G0019906.1 mouse_genomes_project 12 84097802 84147994 + MGP_BALBcJ_P0035434 Gpatch2l protein_coding protein_coding MGP_BALBcJ_T0000060.1 MGP_BALBcJ_G0000046.1 mouse_genomes_project 12 112343256 112347039 - MGP_BALBcJ_P0000060 Ighv2-7 IG_V_gene IG_V_gene MGP_BALBcJ_T0012826.1 MGP_BALBcJ_G0010923.1 mouse_genomes_project 12 104773074 104773420 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003386.1 MGP_BALBcJ_G0003109.1 mouse_genomes_project 12 78380988 78387040 - Plekhd1os antisense antisense MGP_BALBcJ_T0035142.1 MGP_BALBcJ_G0019822.1 mouse_genomes_project 12 77792565 77798928 - MGP_BALBcJ_P0035142 Zfp36l1 protein_coding protein_coding MGP_BALBcJ_T0035143.1 MGP_BALBcJ_G0019822.1 mouse_genomes_project 12 77794165 77798913 - MGP_BALBcJ_P0035143 Zfp36l1 protein_coding protein_coding MGP_BALBcJ_T0035979.1 MGP_BALBcJ_G0020084.1 mouse_genomes_project 12 110261871 110276693 + MGP_BALBcJ_P0035979 Zfyve21 protein_coding protein_coding MGP_BALBcJ_T0035906.1 MGP_BALBcJ_G0020062.1 mouse_genomes_project 12 109223126 109257717 - Mok protein_coding retained_intron MGP_BALBcJ_T0035907.1 MGP_BALBcJ_G0020062.1 mouse_genomes_project 12 109223126 109257708 - MGP_BALBcJ_P0035907 Mok protein_coding protein_coding MGP_BALBcJ_T0035908.1 MGP_BALBcJ_G0020062.1 mouse_genomes_project 12 109223126 109257717 - MGP_BALBcJ_P0035908 Mok protein_coding protein_coding MGP_BALBcJ_T0035909.1 MGP_BALBcJ_G0020062.1 mouse_genomes_project 12 109223369 109257530 - MGP_BALBcJ_P0035909 Mok protein_coding unknown_likely_coding MGP_BALBcJ_T0035910.1 MGP_BALBcJ_G0020062.1 mouse_genomes_project 12 109230170 109257705 - MGP_BALBcJ_P0035910 Mok protein_coding protein_coding MGP_BALBcJ_T0100606.1 MGP_BALBcJ_G0038642.1 mouse_genomes_project 12 108042390 108042464 + Gm24895 snoRNA snoRNA MGP_BALBcJ_T0006364.1 MGP_BALBcJ_G0005307.1 mouse_genomes_project 12 5909460 5913733 - 9930038B18Rik lincRNA lincRNA MGP_BALBcJ_T0102175.1 MGP_BALBcJ_G0039992.1 mouse_genomes_project 12 73289979 73297440 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102176.1 MGP_BALBcJ_G0039992.1 mouse_genomes_project 12 73290644 73297463 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012814.1 MGP_BALBcJ_G0010911.1 mouse_genomes_project 12 86374213 86374647 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035261.1 MGP_BALBcJ_G0019853.1 mouse_genomes_project 12 81490852 81537648 + MGP_BALBcJ_P0035261 Psen1 protein_coding protein_coding MGP_BALBcJ_T0035262.1 MGP_BALBcJ_G0019853.1 mouse_genomes_project 12 81491212 81538734 + MGP_BALBcJ_P0035262 Psen1 protein_coding protein_coding MGP_BALBcJ_T0034628.1 MGP_BALBcJ_G0019631.1 mouse_genomes_project 12 33357759 33386582 - MGP_BALBcJ_P0034628 Tspan13 protein_coding protein_coding MGP_BALBcJ_T0034629.1 MGP_BALBcJ_G0019631.1 mouse_genomes_project 12 33366092 33386593 - MGP_BALBcJ_P0034629 Tspan13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034630.1 MGP_BALBcJ_G0019631.1 mouse_genomes_project 12 33366103 33384027 - MGP_BALBcJ_P0034630 Tspan13 protein_coding protein_coding MGP_BALBcJ_T0035983.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110421141 110513227 + MGP_BALBcJ_P0035983 Tdrd9 protein_coding protein_coding MGP_BALBcJ_T0035984.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110421224 110512822 + MGP_BALBcJ_P0035984 Tdrd9 protein_coding unknown_likely_coding MGP_BALBcJ_T0035990.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110431061 110512822 + MGP_BALBcJ_P0035990 Tdrd9 protein_coding unknown_likely_coding MGP_BALBcJ_T0035991.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110443298 110512723 + MGP_BALBcJ_P0035991 Tdrd9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035992.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110443298 110512723 + MGP_BALBcJ_P0035992 Tdrd9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035993.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110462460 110473758 + Tdrd9 protein_coding retained_intron MGP_BALBcJ_T0035994.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110474201 110488588 + Tdrd9 protein_coding processed_transcript MGP_BALBcJ_T0035995.1 MGP_BALBcJ_G0020087.1 mouse_genomes_project 12 110507526 110511993 + Tdrd9 protein_coding retained_intron MGP_BALBcJ_T0034801.1 MGP_BALBcJ_G0019700.1 mouse_genomes_project 12 55014566 55020067 - MGP_BALBcJ_P0034801 Foxa1 protein_coding protein_coding MGP_BALBcJ_T0099314.1 MGP_BALBcJ_G0037350.1 mouse_genomes_project 12 30345259 30345351 - Gm24922 snRNA snRNA MGP_BALBcJ_T0034684.1 MGP_BALBcJ_G0019649.1 mouse_genomes_project 12 37800210 38203840 + MGP_BALBcJ_P0034684 Dock4 protein_coding protein_coding MGP_BALBcJ_T0000256.1 MGP_BALBcJ_G0000197.1 mouse_genomes_project 12 113431499 113431931 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0012795.1 MGP_BALBcJ_G0010892.1 mouse_genomes_project 12 58865041 58866014 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000260.1 MGP_BALBcJ_G0000201.1 mouse_genomes_project 12 113887811 113888112 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0011307.1 MGP_BALBcJ_G0009432.1 mouse_genomes_project 12 67519687 67519997 + Gm22058 misc_RNA misc_RNA MGP_BALBcJ_T0100596.1 MGP_BALBcJ_G0038632.1 mouse_genomes_project 12 89491838 89491981 - Gm25776 snoRNA snoRNA MGP_BALBcJ_T0009830.1 MGP_BALBcJ_G0007955.1 mouse_genomes_project 12 108107325 108107374 - Mir299b miRNA miRNA MGP_BALBcJ_T0034953.1 MGP_BALBcJ_G0019752.1 mouse_genomes_project 12 68627557 68698104 + MGP_BALBcJ_P0034953 Arid4a protein_coding protein_coding MGP_BALBcJ_T0034954.1 MGP_BALBcJ_G0019752.1 mouse_genomes_project 12 68627596 68679279 + Arid4a protein_coding processed_transcript MGP_BALBcJ_T0034955.1 MGP_BALBcJ_G0019752.1 mouse_genomes_project 12 68628275 68659546 + MGP_BALBcJ_P0034955 Arid4a protein_coding protein_coding MGP_BALBcJ_T0034956.1 MGP_BALBcJ_G0019752.1 mouse_genomes_project 12 68660547 68687603 + MGP_BALBcJ_P0034956 Arid4a protein_coding protein_coding MGP_BALBcJ_T0099325.1 MGP_BALBcJ_G0037361.1 mouse_genomes_project 12 52081583 52081747 - Gm22634 snRNA snRNA MGP_BALBcJ_T0099328.1 MGP_BALBcJ_G0037364.1 mouse_genomes_project 12 56499939 56500114 + Gm22973 snRNA snRNA MGP_BALBcJ_T0006367.1 MGP_BALBcJ_G0005310.1 mouse_genomes_project 12 9880010 9886322 + Platr19 lincRNA lincRNA MGP_BALBcJ_T0034893.1 MGP_BALBcJ_G0019733.1 mouse_genomes_project 12 66951986 66952610 - MGP_BALBcJ_P0034893 Gm9887 protein_coding protein_coding MGP_BALBcJ_T0034852.1 MGP_BALBcJ_G0019716.1 mouse_genomes_project 12 62511237 62569121 + MGP_BALBcJ_P0034852 Fam179b protein_coding protein_coding MGP_BALBcJ_T0000250.1 MGP_BALBcJ_G0000191.1 mouse_genomes_project 12 113190998 113191459 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0011313.1 MGP_BALBcJ_G0009438.1 mouse_genomes_project 12 88948413 88948736 + Gm26477 misc_RNA misc_RNA MGP_BALBcJ_T0036021.1 MGP_BALBcJ_G0020100.1 mouse_genomes_project 12 111235308 111245747 + MGP_BALBcJ_P0036021 Pld4 protein_coding protein_coding MGP_BALBcJ_T0034343.1 MGP_BALBcJ_G0019527.1 mouse_genomes_project 12 5475006 5477228 - MGP_BALBcJ_P0034343 Rhob protein_coding protein_coding MGP_BALBcJ_T0009824.1 MGP_BALBcJ_G0007949.1 mouse_genomes_project 12 108014397 108014484 + Gm23912 miRNA miRNA MGP_BALBcJ_T0012838.1 MGP_BALBcJ_G0010935.1 mouse_genomes_project 12 112963632 112964283 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034270.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 705991 743913 + Dnmt3a protein_coding retained_intron MGP_BALBcJ_T0034271.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 706482 772348 + Dnmt3a protein_coding retained_intron MGP_BALBcJ_T0034272.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 706511 778307 + MGP_BALBcJ_P0034272 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034273.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 707014 820360 + MGP_BALBcJ_P0034273 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034274.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 707042 803159 + MGP_BALBcJ_P0034274 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034275.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 707431 819408 + MGP_BALBcJ_P0034275 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034276.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 754540 813811 + MGP_BALBcJ_P0034276 Dnmt3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034277.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 765949 771091 + MGP_BALBcJ_P0034277 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034278.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 771119 780988 + MGP_BALBcJ_P0034278 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034279.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 790372 802285 + MGP_BALBcJ_P0034279 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034280.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 797891 813766 + MGP_BALBcJ_P0034280 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034281.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 797907 820360 + MGP_BALBcJ_P0034281 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034282.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 800987 801840 + MGP_BALBcJ_P0034282 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034283.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 801032 803140 + MGP_BALBcJ_P0034283 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034284.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 801756 803529 + MGP_BALBcJ_P0034284 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0034285.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 803583 806113 + Dnmt3a protein_coding retained_intron MGP_BALBcJ_T0034286.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 806708 812716 + MGP_BALBcJ_P0034286 Dnmt3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034287.1 MGP_BALBcJ_G0019501.1 mouse_genomes_project 12 812739 814471 + MGP_BALBcJ_P0034287 Dnmt3a protein_coding protein_coding MGP_BALBcJ_T0099320.1 MGP_BALBcJ_G0037356.1 mouse_genomes_project 12 51555905 51556054 + Gm22220 snRNA snRNA MGP_BALBcJ_T0035894.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109101602 109108108 - MGP_BALBcJ_P0035894 Hsp90aa1 protein_coding protein_coding MGP_BALBcJ_T0035895.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109104472 109104893 - Hsp90aa1 protein_coding retained_intron MGP_BALBcJ_T0035896.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109105372 109106005 - Hsp90aa1 protein_coding retained_intron MGP_BALBcJ_T0035897.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109105887 109107385 - Hsp90aa1 protein_coding retained_intron MGP_BALBcJ_T0035898.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109106341 109114394 - MGP_BALBcJ_P0035898 Hsp90aa1 protein_coding protein_coding MGP_BALBcJ_T0035899.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109106982 109107971 - MGP_BALBcJ_P0035899 Hsp90aa1 protein_coding protein_coding MGP_BALBcJ_T0035900.1 MGP_BALBcJ_G0020060.1 mouse_genomes_project 12 109106998 109107664 - MGP_BALBcJ_P0035900 Hsp90aa1 protein_coding protein_coding MGP_BALBcJ_T0012775.1 MGP_BALBcJ_G0010872.1 mouse_genomes_project 12 10575956 10577497 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034300.1 MGP_BALBcJ_G0019507.1 mouse_genomes_project 12 1098598 1119012 - MGP_BALBcJ_P0034300 Cenpo protein_coding protein_coding MGP_BALBcJ_T0034301.1 MGP_BALBcJ_G0019507.1 mouse_genomes_project 12 1100416 1134675 - MGP_BALBcJ_P0034301 Cenpo protein_coding protein_coding MGP_BALBcJ_T0034303.1 MGP_BALBcJ_G0019507.1 mouse_genomes_project 12 1115947 1118972 - Cenpo protein_coding retained_intron MGP_BALBcJ_T0034304.1 MGP_BALBcJ_G0019507.1 mouse_genomes_project 12 1116959 1134654 - MGP_BALBcJ_P0034304 Cenpo protein_coding protein_coding MGP_BALBcJ_T0034305.1 MGP_BALBcJ_G0019507.1 mouse_genomes_project 12 1117823 1132713 - MGP_BALBcJ_P0034305 Cenpo protein_coding protein_coding MGP_BALBcJ_T0034306.1 MGP_BALBcJ_G0019507.1 mouse_genomes_project 12 1118157 1134648 - Cenpo protein_coding retained_intron MGP_BALBcJ_T0035774.1 MGP_BALBcJ_G0020017.1 mouse_genomes_project 12 102645950 102648072 - MGP_BALBcJ_P0035774 Gsc protein_coding protein_coding MGP_BALBcJ_T0100624.1 MGP_BALBcJ_G0038660.1 mouse_genomes_project 12 109972539 109972666 + Snora28 snoRNA snoRNA MGP_BALBcJ_T0035566.1 MGP_BALBcJ_G0019943.1 mouse_genomes_project 12 93661920 93756640 + MGP_BALBcJ_P0035566 Flrt2 protein_coding protein_coding MGP_BALBcJ_T0035567.1 MGP_BALBcJ_G0019943.1 mouse_genomes_project 12 93665056 93752532 + MGP_BALBcJ_P0035567 Flrt2 protein_coding protein_coding MGP_BALBcJ_T0009839.1 MGP_BALBcJ_G0007964.1 mouse_genomes_project 12 108112351 108112472 + Mir1193 miRNA miRNA MGP_BALBcJ_T0099315.1 MGP_BALBcJ_G0037351.1 mouse_genomes_project 12 32800809 32800916 + Gm26071 snRNA snRNA MGP_BALBcJ_T0035117.1 MGP_BALBcJ_G0019812.1 mouse_genomes_project 12 76568636 76586660 - MGP_BALBcJ_P0035117 Plek2 protein_coding protein_coding MGP_BALBcJ_T0009861.1 MGP_BALBcJ_G0007986.1 mouse_genomes_project 12 108135090 108135156 + Mir154 miRNA miRNA MGP_BALBcJ_T0011299.1 MGP_BALBcJ_G0009424.1 mouse_genomes_project 12 14801031 14801328 - Gm25925 misc_RNA misc_RNA MGP_BALBcJ_T0034617.1 MGP_BALBcJ_G0019625.1 mouse_genomes_project 12 32195652 32196708 - MGP_BALBcJ_P0034617 4921508M14Rik protein_coding protein_coding MGP_BALBcJ_T0009755.1 MGP_BALBcJ_G0007880.1 mouse_genomes_project 12 592866 592929 + Gm26050 miRNA miRNA MGP_BALBcJ_T0035079.1 MGP_BALBcJ_G0019796.1 mouse_genomes_project 12 74098978 74120677 + MGP_BALBcJ_P0035079 Ppp1r36 protein_coding protein_coding MGP_BALBcJ_T0036054.1 MGP_BALBcJ_G0020114.1 mouse_genomes_project 12 111630016 111637555 + Crip1 protein_coding processed_transcript MGP_BALBcJ_T0036055.1 MGP_BALBcJ_G0020114.1 mouse_genomes_project 12 111632413 111637522 + MGP_BALBcJ_P0036055 Crip1 protein_coding protein_coding MGP_BALBcJ_T0036056.1 MGP_BALBcJ_G0020114.1 mouse_genomes_project 12 111635701 111637553 + MGP_BALBcJ_P0036056 Crip1 protein_coding protein_coding MGP_BALBcJ_T0036057.1 MGP_BALBcJ_G0020114.1 mouse_genomes_project 12 111635742 111637555 + MGP_BALBcJ_P0036057 Crip1 protein_coding protein_coding MGP_BALBcJ_T0036058.1 MGP_BALBcJ_G0020114.1 mouse_genomes_project 12 111635760 111637555 + Crip1 protein_coding retained_intron MGP_BALBcJ_T0036059.1 MGP_BALBcJ_G0020114.1 mouse_genomes_project 12 111635770 111637555 + Crip1 protein_coding retained_intron MGP_BALBcJ_T0100598.1 MGP_BALBcJ_G0038634.1 mouse_genomes_project 12 100227427 100227642 - Gm25203 snoRNA snoRNA MGP_BALBcJ_T0000334.1 MGP_BALBcJ_G0000275.1 mouse_genomes_project 12 56725453 56725522 + mt-Ti Mt_tRNA Mt_tRNA MGP_BALBcJ_T0100571.1 MGP_BALBcJ_G0038607.1 mouse_genomes_project 12 41107875 41108004 + Gm26326 snoRNA snoRNA MGP_BALBcJ_T0006412.1 MGP_BALBcJ_G0005344.1 mouse_genomes_project 12 84147340 84162591 - 4732487G21Rik lincRNA lincRNA MGP_BALBcJ_T0006436.1 MGP_BALBcJ_G0005364.1 mouse_genomes_project 12 105276872 105279332 - Gm16087 lincRNA lincRNA MGP_BALBcJ_T0100568.1 MGP_BALBcJ_G0038604.1 mouse_genomes_project 12 36826331 36826458 + Gm24069 snoRNA snoRNA MGP_BALBcJ_T0035640.1 MGP_BALBcJ_G0019965.1 mouse_genomes_project 12 99402512 99607898 + MGP_BALBcJ_P0035640 Catsperb protein_coding protein_coding MGP_BALBcJ_T0098316.1 MGP_BALBcJ_G0036370.1 mouse_genomes_project 12 53268178 53269148 + pseudogene pseudogene MGP_BALBcJ_T0035923.1 MGP_BALBcJ_G0020068.1 mouse_genomes_project 12 109585586 109611371 - MGP_BALBcJ_P0035923 4930595D18Rik protein_coding protein_coding MGP_BALBcJ_T0003367.1 MGP_BALBcJ_G0003094.1 mouse_genomes_project 12 28827420 28828352 + Gm29542 antisense antisense MGP_BALBcJ_T0035286.1 MGP_BALBcJ_G0019863.1 mouse_genomes_project 12 81873751 81880447 + MGP_BALBcJ_P0035286 Acot5 protein_coding protein_coding MGP_BALBcJ_T0035287.1 MGP_BALBcJ_G0019863.1 mouse_genomes_project 12 81873751 81880446 + MGP_BALBcJ_P0035287 Acot5 protein_coding protein_coding MGP_BALBcJ_T0102181.1 MGP_BALBcJ_G0039997.1 mouse_genomes_project 12 102253252 102258248 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0034446.1 MGP_BALBcJ_G0019564.1 mouse_genomes_project 12 14847340 14952354 + MGP_BALBcJ_P0034446 Hpcal1 protein_coding protein_coding MGP_BALBcJ_T0003405.1 MGP_BALBcJ_G0003126.1 mouse_genomes_project 12 107392957 107393426 + Gm28498 antisense antisense MGP_BALBcJ_T0034639.1 MGP_BALBcJ_G0019638.1 mouse_genomes_project 12 33736326 34032208 + MGP_BALBcJ_P0034639 Ispd protein_coding protein_coding MGP_BALBcJ_T0006395.1 MGP_BALBcJ_G0005331.1 mouse_genomes_project 12 71938444 71950407 + lincRNA lincRNA MGP_BALBcJ_T0006396.1 MGP_BALBcJ_G0005331.1 mouse_genomes_project 12 71938452 71950421 + lincRNA lincRNA MGP_BALBcJ_T0006397.1 MGP_BALBcJ_G0005331.1 mouse_genomes_project 12 71942898 71950421 + lincRNA lincRNA MGP_BALBcJ_T0011300.1 MGP_BALBcJ_G0009425.1 mouse_genomes_project 12 29705534 29705852 - Gm23875 misc_RNA misc_RNA MGP_BALBcJ_T0009811.1 MGP_BALBcJ_G0007936.1 mouse_genomes_project 12 107982642 107982709 + Mir540 miRNA miRNA MGP_BALBcJ_T0035149.1 MGP_BALBcJ_G0019826.1 mouse_genomes_project 12 78209359 78296655 + MGP_BALBcJ_P0035149 Galnt16 protein_coding protein_coding MGP_BALBcJ_T0035241.1 MGP_BALBcJ_G0019850.1 mouse_genomes_project 12 81322370 81345186 + MGP_BALBcJ_P0035241 Dcaf4 protein_coding protein_coding MGP_BALBcJ_T0034944.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567324 68605291 + MGP_BALBcJ_P0034944 Psma3 protein_coding protein_coding MGP_BALBcJ_T0034945.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567374 68599741 + Psma3 protein_coding retained_intron MGP_BALBcJ_T0034946.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567374 68600161 + MGP_BALBcJ_P0034946 Psma3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034947.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567386 68599745 + MGP_BALBcJ_P0034947 Psma3 protein_coding protein_coding MGP_BALBcJ_T0034948.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567396 68599744 + MGP_BALBcJ_P0034948 Psma3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034949.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567411 68582895 + Psma3 protein_coding retained_intron MGP_BALBcJ_T0034950.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567418 68599715 + MGP_BALBcJ_P0034950 Psma3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034951.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68567422 68588919 + Psma3 protein_coding retained_intron MGP_BALBcJ_T0034952.1 MGP_BALBcJ_G0019751.1 mouse_genomes_project 12 68590973 68599745 + MGP_BALBcJ_P0034952 Psma3 protein_coding protein_coding MGP_BALBcJ_T0012786.1 MGP_BALBcJ_G0010883.1 mouse_genomes_project 12 52019410 52021010 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035297.1 MGP_BALBcJ_G0019867.1 mouse_genomes_project 12 81958014 82029318 - MGP_BALBcJ_P0035297 Elmsan1 protein_coding protein_coding MGP_BALBcJ_T0035298.1 MGP_BALBcJ_G0019867.1 mouse_genomes_project 12 81958116 82004249 - MGP_BALBcJ_P0035298 Elmsan1 protein_coding protein_coding MGP_BALBcJ_T0035299.1 MGP_BALBcJ_G0019867.1 mouse_genomes_project 12 81961783 81965484 - Elmsan1 protein_coding processed_transcript MGP_BALBcJ_T0035300.1 MGP_BALBcJ_G0019867.1 mouse_genomes_project 12 81966779 81970386 - Elmsan1 protein_coding processed_transcript MGP_BALBcJ_T0017263.1 MGP_BALBcJ_G0015168.1 mouse_genomes_project 12 71577896 71601201 - Gm15283 processed_transcript processed_transcript MGP_BALBcJ_T0006473.1 MGP_BALBcJ_G0005380.1 mouse_genomes_project 12 109259053 109262461 - Gm26912 lincRNA lincRNA MGP_BALBcJ_T0012822.1 MGP_BALBcJ_G0010919.1 mouse_genomes_project 12 99839759 99840106 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100590.1 MGP_BALBcJ_G0038626.1 mouse_genomes_project 12 79206515 79206643 + snoRNA snoRNA MGP_BALBcJ_T0006437.1 MGP_BALBcJ_G0005365.1 mouse_genomes_project 12 105403497 105424342 - Gm16086 lincRNA lincRNA MGP_BALBcJ_T0099347.1 MGP_BALBcJ_G0037383.1 mouse_genomes_project 12 93350160 93350267 - Gm26055 snRNA snRNA MGP_BALBcJ_T0035116.1 MGP_BALBcJ_G0019811.1 mouse_genomes_project 12 76541716 76566964 + MGP_BALBcJ_P0035116 Eif2s1 protein_coding protein_coding MGP_BALBcJ_T0035315.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179002 82191012 + MGP_BALBcJ_P0035315 Coq6 protein_coding protein_coding MGP_BALBcJ_T0035316.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179313 82191016 + MGP_BALBcJ_P0035316 Coq6 protein_coding protein_coding MGP_BALBcJ_T0035317.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179341 82191016 + Coq6 protein_coding retained_intron MGP_BALBcJ_T0035318.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179375 82191012 + MGP_BALBcJ_P0035318 Coq6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035319.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179384 82191012 + MGP_BALBcJ_P0035319 Coq6 protein_coding protein_coding MGP_BALBcJ_T0035320.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179386 82184328 + Coq6 protein_coding processed_transcript MGP_BALBcJ_T0035321.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179388 82191008 + Coq6 protein_coding retained_intron MGP_BALBcJ_T0035322.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82179409 82188251 + MGP_BALBcJ_P0035322 Coq6 protein_coding protein_coding MGP_BALBcJ_T0035323.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82185649 82189463 + Coq6 protein_coding processed_transcript MGP_BALBcJ_T0035324.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82185649 82191012 + Coq6 protein_coding processed_transcript MGP_BALBcJ_T0035325.1 MGP_BALBcJ_G0019871.1 mouse_genomes_project 12 82188221 82189385 + Coq6 protein_coding retained_intron MGP_BALBcJ_T0034865.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64047496 64818922 - MGP_BALBcJ_P0034865 Mdga2 protein_coding protein_coding MGP_BALBcJ_T0034866.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64048564 64048987 - MGP_BALBcJ_P0034866 Mdga2 protein_coding protein_coding MGP_BALBcJ_T0034867.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64049110 64817568 - MGP_BALBcJ_P0034867 Mdga2 protein_coding protein_coding MGP_BALBcJ_T0034868.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64049397 64817549 - MGP_BALBcJ_P0034868 Mdga2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034869.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64059550 64065004 - Mdga2 protein_coding retained_intron MGP_BALBcJ_T0034870.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64207061 64217571 - Mdga2 protein_coding processed_transcript MGP_BALBcJ_T0034871.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64277615 64415894 - Mdga2 protein_coding processed_transcript MGP_BALBcJ_T0034872.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64792930 64818915 - Mdga2 protein_coding processed_transcript MGP_BALBcJ_T0034873.1 MGP_BALBcJ_G0019722.1 mouse_genomes_project 12 64808843 64818754 - Mdga2 protein_coding processed_transcript MGP_BALBcJ_T0035674.1 MGP_BALBcJ_G0019976.1 mouse_genomes_project 12 100557048 100695859 - MGP_BALBcJ_P0035674 Itpk1 protein_coding protein_coding MGP_BALBcJ_T0035675.1 MGP_BALBcJ_G0019976.1 mouse_genomes_project 12 100572763 100582540 - Itpk1 protein_coding processed_transcript MGP_BALBcJ_T0035676.1 MGP_BALBcJ_G0019976.1 mouse_genomes_project 12 100576369 100632292 - MGP_BALBcJ_P0035676 Itpk1 protein_coding protein_coding MGP_BALBcJ_T0035677.1 MGP_BALBcJ_G0019976.1 mouse_genomes_project 12 100611834 100695957 - MGP_BALBcJ_P0035677 Itpk1 protein_coding protein_coding MGP_BALBcJ_T0000014.1 MGP_BALBcJ_G0000010.1 mouse_genomes_project 12 111916878 111921040 - MGP_BALBcJ_P0000014 Ighm IG_C_gene IG_C_gene MGP_BALBcJ_T0000015.1 MGP_BALBcJ_G0000010.1 mouse_genomes_project 12 111919051 111921040 - MGP_BALBcJ_P0000015 Ighm IG_C_gene IG_C_gene MGP_BALBcJ_T0036069.1 MGP_BALBcJ_G0000010.1 mouse_genomes_project 12 111916876 111920966 - MGP_BALBcJ_P0036069 Ighm IG_C_gene unknown_likely_coding MGP_BALBcJ_T0009758.1 MGP_BALBcJ_G0007883.1 mouse_genomes_project 12 12951812 12951920 - Mir6387 miRNA miRNA MGP_BALBcJ_T0034704.1 MGP_BALBcJ_G0019656.1 mouse_genomes_project 12 44005925 44132218 - MGP_BALBcJ_P0034704 Nova1 protein_coding protein_coding MGP_BALBcJ_T0034393.1 MGP_BALBcJ_G0019546.1 mouse_genomes_project 12 10004056 10004888 + MGP_BALBcJ_P0034393 Rpl36-ps3 protein_coding protein_coding MGP_BALBcJ_T0035205.1 MGP_BALBcJ_G0019843.1 mouse_genomes_project 12 79331005 79364946 + MGP_BALBcJ_P0035205 Ttc9 protein_coding protein_coding MGP_BALBcJ_T0100586.1 MGP_BALBcJ_G0038622.1 mouse_genomes_project 12 64145356 64145475 - Gm23826 snoRNA snoRNA MGP_BALBcJ_T0012820.1 MGP_BALBcJ_G0010917.1 mouse_genomes_project 12 99187948 99188741 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099346.1 MGP_BALBcJ_G0037382.1 mouse_genomes_project 12 91674444 91674605 + Gm23249 snRNA snRNA MGP_BALBcJ_T0035468.1 MGP_BALBcJ_G0019915.1 mouse_genomes_project 12 84987027 85028610 - MGP_BALBcJ_P0035468 Pomt2 protein_coding protein_coding MGP_BALBcJ_T0000264.1 MGP_BALBcJ_G0000205.1 mouse_genomes_project 12 114806887 114807166 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0035081.1 MGP_BALBcJ_G0019798.1 mouse_genomes_project 12 74214068 74259395 + MGP_BALBcJ_P0035081 Plekhg3 protein_coding protein_coding MGP_BALBcJ_T0035082.1 MGP_BALBcJ_G0019798.1 mouse_genomes_project 12 74227656 74258764 + MGP_BALBcJ_P0035082 Plekhg3 protein_coding unknown_likely_coding MGP_BALBcJ_T0034732.1 MGP_BALBcJ_G0019671.1 mouse_genomes_project 12 49398524 49601521 + MGP_BALBcJ_P0034732 Nubpl protein_coding protein_coding MGP_BALBcJ_T0034733.1 MGP_BALBcJ_G0019671.1 mouse_genomes_project 12 49398543 49441322 + Nubpl protein_coding retained_intron MGP_BALBcJ_T0034734.1 MGP_BALBcJ_G0019671.1 mouse_genomes_project 12 49398548 49401871 + Nubpl protein_coding retained_intron MGP_BALBcJ_T0034735.1 MGP_BALBcJ_G0019671.1 mouse_genomes_project 12 49427560 49591205 + MGP_BALBcJ_P0034735 Nubpl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100591.1 MGP_BALBcJ_G0038627.1 mouse_genomes_project 12 79206522 79206643 + snoRNA snoRNA MGP_BALBcJ_T0006429.1 MGP_BALBcJ_G0005360.1 mouse_genomes_project 12 104756175 104761576 - 1700121N20Rik lincRNA lincRNA MGP_BALBcJ_T0036070.1 MGP_BALBcJ_G0020117.1 mouse_genomes_project 12 114976303 114989431 + MGP_BALBcJ_P0036070 Zfp386 protein_coding protein_coding MGP_BALBcJ_T0036071.1 MGP_BALBcJ_G0020117.1 mouse_genomes_project 12 114976343 114983655 + Zfp386 protein_coding retained_intron MGP_BALBcJ_T0036072.1 MGP_BALBcJ_G0020117.1 mouse_genomes_project 12 114976355 114992200 + MGP_BALBcJ_P0036072 Zfp386 protein_coding protein_coding MGP_BALBcJ_T0036073.1 MGP_BALBcJ_G0020117.1 mouse_genomes_project 12 114976408 114980207 + Zfp386 protein_coding retained_intron MGP_BALBcJ_T0034881.1 MGP_BALBcJ_G0019727.1 mouse_genomes_project 12 66763569 66774617 - MGP_BALBcJ_P0034881 Dnaaf2 protein_coding protein_coding MGP_BALBcJ_T0006426.1 MGP_BALBcJ_G0005358.1 mouse_genomes_project 12 103611546 103659200 + lincRNA lincRNA MGP_BALBcJ_T0006427.1 MGP_BALBcJ_G0005358.1 mouse_genomes_project 12 103611945 103659198 + lincRNA lincRNA MGP_BALBcJ_T0003376.1 MGP_BALBcJ_G0003101.1 mouse_genomes_project 12 54131706 54134757 - Gm15524 antisense antisense MGP_BALBcJ_T0035150.1 MGP_BALBcJ_G0019827.1 mouse_genomes_project 12 78327541 78337753 - MGP_BALBcJ_P0035150 protein_coding protein_coding MGP_BALBcJ_T0035151.1 MGP_BALBcJ_G0019827.1 mouse_genomes_project 12 78327879 78337244 - MGP_BALBcJ_P0035151 protein_coding protein_coding MGP_BALBcJ_T0035126.1 MGP_BALBcJ_G0019816.1 mouse_genomes_project 12 76808465 76835281 + MGP_BALBcJ_P0035126 Arg2 protein_coding protein_coding MGP_BALBcJ_T0034818.1 MGP_BALBcJ_G0019708.1 mouse_genomes_project 12 56553562 56571923 + MGP_BALBcJ_P0034818 Mia2 protein_coding protein_coding MGP_BALBcJ_T0034819.1 MGP_BALBcJ_G0019708.1 mouse_genomes_project 12 56553563 56581787 + MGP_BALBcJ_P0034819 Mia2 protein_coding unknown_likely_coding MGP_BALBcJ_T0035147.1 MGP_BALBcJ_G0019824.1 mouse_genomes_project 12 78025293 78123809 - MGP_BALBcJ_P0035147 Dcaf5 protein_coding protein_coding MGP_BALBcJ_T0035030.1 MGP_BALBcJ_G0019779.1 mouse_genomes_project 12 71615995 71637096 + MGP_BALBcJ_P0035030 Snapc1 protein_coding protein_coding MGP_BALBcJ_T0017264.1 MGP_BALBcJ_G0015169.1 mouse_genomes_project 12 79236997 79238319 - Gm17191 processed_transcript processed_transcript MGP_BALBcJ_T0036099.1 MGP_BALBcJ_G0020128.1 mouse_genomes_project 12 117788548 117889202 - MGP_BALBcJ_P0036099 Abcb5 protein_coding protein_coding MGP_BALBcJ_T0036100.1 MGP_BALBcJ_G0020128.1 mouse_genomes_project 12 117808413 117813028 - Abcb5 protein_coding retained_intron MGP_BALBcJ_T0036101.1 MGP_BALBcJ_G0020128.1 mouse_genomes_project 12 117808886 117846329 - Abcb5 protein_coding processed_transcript MGP_BALBcJ_T0009874.1 MGP_BALBcJ_G0007999.1 mouse_genomes_project 12 110560076 110560136 - Mir3073b miRNA miRNA MGP_BALBcJ_T0035311.1 MGP_BALBcJ_G0019870.1 mouse_genomes_project 12 82162654 82179179 - MGP_BALBcJ_P0035311 Fam161b protein_coding protein_coding MGP_BALBcJ_T0035312.1 MGP_BALBcJ_G0019870.1 mouse_genomes_project 12 82162662 82179167 - MGP_BALBcJ_P0035312 Fam161b protein_coding protein_coding MGP_BALBcJ_T0035313.1 MGP_BALBcJ_G0019870.1 mouse_genomes_project 12 82163837 82179138 - Fam161b protein_coding retained_intron MGP_BALBcJ_T0035314.1 MGP_BALBcJ_G0019870.1 mouse_genomes_project 12 82165704 82172201 - Fam161b protein_coding retained_intron MGP_BALBcJ_T0099327.1 MGP_BALBcJ_G0037363.1 mouse_genomes_project 12 53359453 53359556 - Gm22296 snRNA snRNA MGP_BALBcJ_T0034391.1 MGP_BALBcJ_G0019545.1 mouse_genomes_project 12 9351389 9461594 + MGP_BALBcJ_P0034391 Fam49a protein_coding protein_coding MGP_BALBcJ_T0034392.1 MGP_BALBcJ_G0019545.1 mouse_genomes_project 12 9351389 9461594 + MGP_BALBcJ_P0034392 Fam49a protein_coding protein_coding MGP_BALBcJ_T0035930.1 MGP_BALBcJ_G0020071.1 mouse_genomes_project 12 109720657 109806504 - MGP_BALBcJ_P0035930 Cdc42bpb protein_coding protein_coding MGP_BALBcJ_T0098475.1 MGP_BALBcJ_G0036529.1 mouse_genomes_project 12 25426442 25426580 - Gm25923 rRNA rRNA MGP_BALBcJ_T0009864.1 MGP_BALBcJ_G0007989.1 mouse_genomes_project 12 108139066 108139156 + Mir541 miRNA miRNA MGP_BALBcJ_T0035547.1 MGP_BALBcJ_G0019940.1 mouse_genomes_project 12 89473275 89514561 - MGP_BALBcJ_P0035547 Gtf2a1 protein_coding protein_coding MGP_BALBcJ_T0035548.1 MGP_BALBcJ_G0019940.1 mouse_genomes_project 12 89473929 89508796 - MGP_BALBcJ_P0035548 Gtf2a1 protein_coding protein_coding MGP_BALBcJ_T0034971.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69705910 69715174 + MGP_BALBcJ_P0034971 Jkamp protein_coding protein_coding MGP_BALBcJ_T0034972.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69706110 69714322 + Jkamp protein_coding processed_transcript MGP_BALBcJ_T0034973.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69706178 69721092 + MGP_BALBcJ_P0034973 Jkamp protein_coding protein_coding MGP_BALBcJ_T0034974.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69706178 69721692 + MGP_BALBcJ_P0034974 Jkamp protein_coding protein_coding MGP_BALBcJ_T0034975.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69709470 69715174 + Jkamp protein_coding retained_intron MGP_BALBcJ_T0034976.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69710011 69715048 + Jkamp protein_coding retained_intron MGP_BALBcJ_T0034977.1 MGP_BALBcJ_G0019760.1 mouse_genomes_project 12 69719991 69721043 + Jkamp protein_coding retained_intron MGP_BALBcJ_T0034849.1 MGP_BALBcJ_G0019713.1 mouse_genomes_project 12 62017717 62021319 - MGP_BALBcJ_P0034849 Fscb protein_coding protein_coding MGP_BALBcJ_T0036083.1 MGP_BALBcJ_G0020122.1 mouse_genomes_project 12 115427713 115693296 + Ptprn2 protein_coding processed_transcript MGP_BALBcJ_T0036084.1 MGP_BALBcJ_G0020122.1 mouse_genomes_project 12 115427722 116027574 + Ptprn2 protein_coding processed_transcript MGP_BALBcJ_T0036085.1 MGP_BALBcJ_G0020122.1 mouse_genomes_project 12 115427722 116182040 + MGP_BALBcJ_P0036085 Ptprn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036086.1 MGP_BALBcJ_G0020122.1 mouse_genomes_project 12 115427763 115758229 + Ptprn2 protein_coding retained_intron MGP_BALBcJ_T0036087.1 MGP_BALBcJ_G0020122.1 mouse_genomes_project 12 115427826 116181984 + MGP_BALBcJ_P0036087 Ptprn2 protein_coding protein_coding MGP_BALBcJ_T0034314.1 MGP_BALBcJ_G0019514.1 mouse_genomes_project 12 1664466 1692199 - MGP_BALBcJ_P0034314 Fam228b protein_coding unknown_likely_coding MGP_BALBcJ_T0034315.1 MGP_BALBcJ_G0019514.1 mouse_genomes_project 12 1669614 1692969 - MGP_BALBcJ_P0034315 Fam228b protein_coding protein_coding MGP_BALBcJ_T0034904.1 MGP_BALBcJ_G0019737.1 mouse_genomes_project 12 67261857 67296754 - MGP_BALBcJ_P0034904 L2hgdh protein_coding protein_coding MGP_BALBcJ_T0034612.1 MGP_BALBcJ_G0019622.1 mouse_genomes_project 12 31300314 31302461 + MGP_BALBcJ_P0034612 Twist1 protein_coding protein_coding MGP_BALBcJ_T0034964.1 MGP_BALBcJ_G0019756.1 mouse_genomes_project 12 68912244 68922495 + MGP_BALBcJ_P0034964 Dact1 protein_coding protein_coding MGP_BALBcJ_T0034965.1 MGP_BALBcJ_G0019756.1 mouse_genomes_project 12 68912344 68921283 + MGP_BALBcJ_P0034965 Dact1 protein_coding protein_coding MGP_BALBcJ_T0034613.1 MGP_BALBcJ_G0019623.1 mouse_genomes_project 12 31425579 31647472 - MGP_BALBcJ_P0034613 Gm18025 protein_coding unknown_likely_coding MGP_BALBcJ_T0034614.1 MGP_BALBcJ_G0019623.1 mouse_genomes_project 12 31619390 31620157 - MGP_BALBcJ_P0034614 Gm18025 protein_coding protein_coding MGP_BALBcJ_T0035006.1 MGP_BALBcJ_G0019770.1 mouse_genomes_project 12 70678159 70681532 - Six1 protein_coding processed_transcript MGP_BALBcJ_T0035007.1 MGP_BALBcJ_G0019770.1 mouse_genomes_project 12 70680543 70685896 - MGP_BALBcJ_P0035007 Six1 protein_coding protein_coding MGP_BALBcJ_T0035008.1 MGP_BALBcJ_G0019770.1 mouse_genomes_project 12 70682247 70692582 - Six1 protein_coding processed_transcript MGP_BALBcJ_T0035009.1 MGP_BALBcJ_G0019770.1 mouse_genomes_project 12 70682490 70684008 - Six1 protein_coding processed_transcript MGP_BALBcJ_T0034778.1 MGP_BALBcJ_G0019692.1 mouse_genomes_project 12 53284657 53318011 + MGP_BALBcJ_P0034778 Brms1l protein_coding protein_coding MGP_BALBcJ_T0009863.1 MGP_BALBcJ_G0007988.1 mouse_genomes_project 12 108137167 108137235 + Mir377 miRNA miRNA MGP_BALBcJ_T0034477.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22007356 22022894 - MGP_BALBcJ_P0034477 Cys1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034478.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22007366 22022876 - MGP_BALBcJ_P0034478 Cys1 protein_coding protein_coding MGP_BALBcJ_T0034479.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22007366 22022876 - MGP_BALBcJ_P0034479 Cys1 protein_coding protein_coding MGP_BALBcJ_T0034480.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22007471 22022102 - MGP_BALBcJ_P0034480 Cys1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034481.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22007471 22022102 - MGP_BALBcJ_P0034481 Cys1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034482.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22008072 22021016 - Cys1 protein_coding processed_transcript MGP_BALBcJ_T0034483.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22008208 22022013 - MGP_BALBcJ_P0034483 Cys1 protein_coding protein_coding MGP_BALBcJ_T0034484.1 MGP_BALBcJ_G0019575.1 mouse_genomes_project 12 22010005 22021798 - MGP_BALBcJ_P0034484 Cys1 protein_coding protein_coding MGP_BALBcJ_T0012844.1 MGP_BALBcJ_G0010941.1 mouse_genomes_project 12 118909828 118910270 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000238.1 MGP_BALBcJ_G0000179.1 mouse_genomes_project 12 112412618 112413063 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0035825.1 MGP_BALBcJ_G0020039.1 mouse_genomes_project 12 106243212 106338701 - MGP_BALBcJ_P0035825 Bcl11b protein_coding protein_coding MGP_BALBcJ_T0035826.1 MGP_BALBcJ_G0020039.1 mouse_genomes_project 12 106248266 106338513 - MGP_BALBcJ_P0035826 Bcl11b protein_coding protein_coding MGP_BALBcJ_T0035827.1 MGP_BALBcJ_G0020039.1 mouse_genomes_project 12 106248266 106338513 - MGP_BALBcJ_P0035827 Bcl11b protein_coding protein_coding MGP_BALBcJ_T0003379.1 MGP_BALBcJ_G0003104.1 mouse_genomes_project 12 66848615 66854241 - Gm15561 antisense antisense MGP_BALBcJ_T0034631.1 MGP_BALBcJ_G0019632.1 mouse_genomes_project 12 33435866 33437312 + MGP_BALBcJ_P0034631 Gm5434 protein_coding protein_coding MGP_BALBcJ_T0034917.1 MGP_BALBcJ_G0019741.1 mouse_genomes_project 12 67481765 67552186 + MGP_BALBcJ_P0034917 Atl1 protein_coding protein_coding MGP_BALBcJ_T0034741.1 MGP_BALBcJ_G0019676.1 mouse_genomes_project 12 51963619 51974812 - MGP_BALBcJ_P0034741 Sptssa protein_coding protein_coding MGP_BALBcJ_T0034587.1 MGP_BALBcJ_G0019615.1 mouse_genomes_project 12 30158062 30195450 + MGP_BALBcJ_P0034587 Nampt protein_coding unknown_likely_coding MGP_BALBcJ_T0036074.1 MGP_BALBcJ_G0020118.1 mouse_genomes_project 12 115017110 115077926 + Vipr2 protein_coding retained_intron MGP_BALBcJ_T0036075.1 MGP_BALBcJ_G0020118.1 mouse_genomes_project 12 115017112 115084157 + MGP_BALBcJ_P0036075 Vipr2 protein_coding protein_coding MGP_BALBcJ_T0036076.1 MGP_BALBcJ_G0020118.1 mouse_genomes_project 12 115017144 115038135 + Vipr2 protein_coding processed_transcript MGP_BALBcJ_T0036077.1 MGP_BALBcJ_G0020118.1 mouse_genomes_project 12 115017150 115034294 + Vipr2 protein_coding processed_transcript MGP_BALBcJ_T0036078.1 MGP_BALBcJ_G0020118.1 mouse_genomes_project 12 115017157 115071289 + Vipr2 protein_coding processed_transcript MGP_BALBcJ_T0036079.1 MGP_BALBcJ_G0020118.1 mouse_genomes_project 12 115075311 115081692 + MGP_BALBcJ_P0036079 Vipr2 protein_coding protein_coding MGP_BALBcJ_T0098490.1 MGP_BALBcJ_G0036544.1 mouse_genomes_project 12 116482428 116482534 + Gm24741 rRNA rRNA MGP_BALBcJ_T0003372.1 MGP_BALBcJ_G0003099.1 mouse_genomes_project 12 51371703 51389034 - 1700060O08Rik antisense antisense MGP_BALBcJ_T0034984.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70066548 70137784 + MGP_BALBcJ_P0034984 Lrrc9 protein_coding protein_coding MGP_BALBcJ_T0034985.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70066615 70124433 + MGP_BALBcJ_P0034985 Lrrc9 protein_coding protein_coding MGP_BALBcJ_T0034986.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70066631 70093575 + Lrrc9 protein_coding retained_intron MGP_BALBcJ_T0034987.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70066717 70141553 + Lrrc9 protein_coding processed_transcript MGP_BALBcJ_T0034988.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70066924 70080465 + Lrrc9 protein_coding retained_intron MGP_BALBcJ_T0034989.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70066931 70100282 + Lrrc9 protein_coding retained_intron MGP_BALBcJ_T0034990.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70067069 70139602 + MGP_BALBcJ_P0034990 Lrrc9 protein_coding unknown_likely_coding MGP_BALBcJ_T0034991.1 MGP_BALBcJ_G0019763.1 mouse_genomes_project 12 70102145 70103733 + Lrrc9 protein_coding retained_intron MGP_BALBcJ_T0017262.1 MGP_BALBcJ_G0015167.1 mouse_genomes_project 12 68920009 68925531 - 4930474H06Rik processed_transcript processed_transcript MGP_BALBcJ_T0034342.1 MGP_BALBcJ_G0019526.1 mouse_genomes_project 12 5288615 5318981 + MGP_BALBcJ_P0034342 Hs1bp3 protein_coding protein_coding MGP_BALBcJ_T0006387.1 MGP_BALBcJ_G0005325.1 mouse_genomes_project 12 49203162 49204609 + Gm26517 lincRNA lincRNA MGP_BALBcJ_T0012800.1 MGP_BALBcJ_G0010897.1 mouse_genomes_project 12 69454644 69455605 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009803.1 MGP_BALBcJ_G0007928.1 mouse_genomes_project 12 107074050 107074127 - Gm23872 miRNA miRNA MGP_BALBcJ_T0036003.1 MGP_BALBcJ_G0020095.1 mouse_genomes_project 12 111092229 111113907 + MGP_BALBcJ_P0036003 Adssl1 protein_coding protein_coding MGP_BALBcJ_T0036004.1 MGP_BALBcJ_G0020095.1 mouse_genomes_project 12 111092231 111113922 + MGP_BALBcJ_P0036004 Adssl1 protein_coding protein_coding MGP_BALBcJ_T0009780.1 MGP_BALBcJ_G0007905.1 mouse_genomes_project 12 70101924 70102039 - Gm44392 miRNA miRNA MGP_BALBcJ_T0034807.1 MGP_BALBcJ_G0019703.1 mouse_genomes_project 12 55712628 55717170 - MGP_BALBcJ_P0034807 Clec14a protein_coding protein_coding MGP_BALBcJ_T0035544.1 MGP_BALBcJ_G0019939.1 mouse_genomes_project 12 89342252 89457890 + MGP_BALBcJ_P0035544 Tshr protein_coding protein_coding MGP_BALBcJ_T0035545.1 MGP_BALBcJ_G0019939.1 mouse_genomes_project 12 89342258 89439922 + MGP_BALBcJ_P0035545 Tshr protein_coding protein_coding MGP_BALBcJ_T0035546.1 MGP_BALBcJ_G0019939.1 mouse_genomes_project 12 89455446 89456937 + MGP_BALBcJ_P0035546 Tshr protein_coding protein_coding MGP_BALBcJ_T0012802.1 MGP_BALBcJ_G0010899.1 mouse_genomes_project 12 71612714 71613011 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009843.1 MGP_BALBcJ_G0007968.1 mouse_genomes_project 12 108116686 108116778 + Mir667 miRNA miRNA MGP_BALBcJ_T0035288.1 MGP_BALBcJ_G0019864.1 mouse_genomes_project 12 81906001 81916870 + MGP_BALBcJ_P0035288 Acot6 protein_coding protein_coding MGP_BALBcJ_T0003369.1 MGP_BALBcJ_G0003096.1 mouse_genomes_project 12 37397490 37399423 + Arl4aos antisense antisense MGP_BALBcJ_T0000258.1 MGP_BALBcJ_G0000199.1 mouse_genomes_project 12 113853101 113853535 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034690.1 MGP_BALBcJ_G0019651.1 mouse_genomes_project 12 38823196 38857192 - MGP_BALBcJ_P0034690 Lrrn3 protein_coding protein_coding MGP_BALBcJ_T0011305.1 MGP_BALBcJ_G0009430.1 mouse_genomes_project 12 66732340 66732640 + Rn7s1 misc_RNA misc_RNA MGP_BALBcJ_T0006474.1 MGP_BALBcJ_G0005381.1 mouse_genomes_project 12 109712447 109715049 + A230087F16Rik lincRNA lincRNA MGP_BALBcJ_T0006475.1 MGP_BALBcJ_G0005381.1 mouse_genomes_project 12 109712469 109721674 + A230087F16Rik lincRNA lincRNA MGP_BALBcJ_T0035340.1 MGP_BALBcJ_G0019877.1 mouse_genomes_project 12 82394144 82419752 + MGP_BALBcJ_P0035340 Vsx2 protein_coding protein_coding MGP_BALBcJ_T0035341.1 MGP_BALBcJ_G0019877.1 mouse_genomes_project 12 82394222 82419752 + MGP_BALBcJ_P0035341 Vsx2 protein_coding protein_coding MGP_BALBcJ_T0011314.1 MGP_BALBcJ_G0009439.1 mouse_genomes_project 12 94237260 94237557 - Gm26480 misc_RNA misc_RNA MGP_BALBcJ_T0034493.1 MGP_BALBcJ_G0019579.1 mouse_genomes_project 12 22437750 22440044 - MGP_BALBcJ_P0034493 Id2 protein_coding protein_coding MGP_BALBcJ_T0100560.1 MGP_BALBcJ_G0038596.1 mouse_genomes_project 12 22115465 22115594 + Gm26211 snoRNA snoRNA MGP_BALBcJ_T0100599.1 MGP_BALBcJ_G0038635.1 mouse_genomes_project 12 102590885 102591013 - Gm24334 snoRNA snoRNA MGP_BALBcJ_T0035441.1 MGP_BALBcJ_G0019908.1 mouse_genomes_project 12 84548412 84562174 + MGP_BALBcJ_P0035441 Vash1 protein_coding protein_coding MGP_BALBcJ_T0036001.1 MGP_BALBcJ_G0020093.1 mouse_genomes_project 12 110971158 110982957 - MGP_BALBcJ_P0036001 Tmem179 protein_coding protein_coding MGP_BALBcJ_T0035795.1 MGP_BALBcJ_G0020031.1 mouse_genomes_project 12 103846607 103876966 + MGP_BALBcJ_P0035795 Bdkrb2 protein_coding protein_coding MGP_BALBcJ_T0009781.1 MGP_BALBcJ_G0007906.1 mouse_genomes_project 12 73572933 73573016 + Mir5101 miRNA miRNA MGP_BALBcJ_T0011320.1 MGP_BALBcJ_G0009445.1 mouse_genomes_project 12 117671388 117671587 + Gm22537 misc_RNA misc_RNA MGP_BALBcJ_T0035641.1 MGP_BALBcJ_G0019966.1 mouse_genomes_project 12 99627911 99694658 - MGP_BALBcJ_P0035641 Tc2n protein_coding protein_coding MGP_BALBcJ_T0035642.1 MGP_BALBcJ_G0019966.1 mouse_genomes_project 12 99629024 99690472 - MGP_BALBcJ_P0035642 Tc2n protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035643.1 MGP_BALBcJ_G0019966.1 mouse_genomes_project 12 99631884 99688105 - MGP_BALBcJ_P0035643 Tc2n protein_coding protein_coding MGP_BALBcJ_T0035644.1 MGP_BALBcJ_G0019966.1 mouse_genomes_project 12 99631931 99690140 - MGP_BALBcJ_P0035644 Tc2n protein_coding protein_coding MGP_BALBcJ_T0035326.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82191076 82222457 - MGP_BALBcJ_P0035326 Entpd5 protein_coding protein_coding MGP_BALBcJ_T0035327.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82191076 82222457 - MGP_BALBcJ_P0035327 Entpd5 protein_coding protein_coding MGP_BALBcJ_T0035328.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82191094 82226018 - MGP_BALBcJ_P0035328 Entpd5 protein_coding protein_coding MGP_BALBcJ_T0035329.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82191097 82226003 - MGP_BALBcJ_P0035329 Entpd5 protein_coding protein_coding MGP_BALBcJ_T0035330.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82193896 82218124 - MGP_BALBcJ_P0035330 Entpd5 protein_coding protein_coding MGP_BALBcJ_T0035331.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82194228 82218075 - MGP_BALBcJ_P0035331 Entpd5 protein_coding protein_coding MGP_BALBcJ_T0035332.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82197575 82202704 - Entpd5 protein_coding retained_intron MGP_BALBcJ_T0035333.1 MGP_BALBcJ_G0019872.1 mouse_genomes_project 12 82220601 82225973 - Entpd5 protein_coding processed_transcript MGP_BALBcJ_T0003353.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 94640 100613 + Rab10os antisense antisense MGP_BALBcJ_T0003354.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 94662 97476 + Rab10os antisense antisense MGP_BALBcJ_T0003355.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 94662 109580 + Rab10os antisense antisense MGP_BALBcJ_T0003356.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 94927 109579 + Rab10os antisense antisense MGP_BALBcJ_T0003357.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 94968 98437 + Rab10os antisense antisense MGP_BALBcJ_T0003358.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 95051 109147 + Rab10os antisense antisense MGP_BALBcJ_T0003359.1 MGP_BALBcJ_G0003089.1 mouse_genomes_project 12 95749 109202 + Rab10os antisense antisense MGP_BALBcJ_T0009806.1 MGP_BALBcJ_G0007931.1 mouse_genomes_project 12 107960177 107960271 + Mir770 miRNA miRNA MGP_BALBcJ_T0034762.1 MGP_BALBcJ_G0019685.1 mouse_genomes_project 12 52479521 52713239 + MGP_BALBcJ_P0034762 protein_coding protein_coding MGP_BALBcJ_T0034310.1 MGP_BALBcJ_G0019511.1 mouse_genomes_project 12 1513448 1635758 + MGP_BALBcJ_P0034310 Itsn2 protein_coding protein_coding MGP_BALBcJ_T0034311.1 MGP_BALBcJ_G0019511.1 mouse_genomes_project 12 1533730 1596393 + MGP_BALBcJ_P0034311 Itsn2 protein_coding unknown_likely_coding MGP_BALBcJ_T0034736.1 MGP_BALBcJ_G0019672.1 mouse_genomes_project 12 49793252 49861743 + MGP_BALBcJ_P0034736 Arhgap5 protein_coding unknown_likely_coding MGP_BALBcJ_T0009776.1 MGP_BALBcJ_G0007901.1 mouse_genomes_project 12 66941408 66941488 - miRNA miRNA MGP_BALBcJ_T0035391.1 MGP_BALBcJ_G0019894.1 mouse_genomes_project 12 83120747 83128782 - MGP_BALBcJ_P0035391 Acyp1 protein_coding protein_coding MGP_BALBcJ_T0035392.1 MGP_BALBcJ_G0019894.1 mouse_genomes_project 12 83120758 83128653 - MGP_BALBcJ_P0035392 Acyp1 protein_coding protein_coding MGP_BALBcJ_T0035393.1 MGP_BALBcJ_G0019894.1 mouse_genomes_project 12 83120896 83135233 - MGP_BALBcJ_P0035393 Acyp1 protein_coding protein_coding MGP_BALBcJ_T0035394.1 MGP_BALBcJ_G0019894.1 mouse_genomes_project 12 83127239 83128765 - MGP_BALBcJ_P0035394 Acyp1 protein_coding protein_coding MGP_BALBcJ_T0035856.1 MGP_BALBcJ_G0020050.1 mouse_genomes_project 12 107211774 107217460 + MGP_BALBcJ_P0035856 Slc25a47 protein_coding protein_coding MGP_BALBcJ_T0034995.1 MGP_BALBcJ_G0019767.1 mouse_genomes_project 12 70390898 70424370 + MGP_BALBcJ_P0034995 Ppm1a protein_coding protein_coding MGP_BALBcJ_T0000240.1 MGP_BALBcJ_G0000181.1 mouse_genomes_project 12 112424029 112424326 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034882.1 MGP_BALBcJ_G0019728.1 mouse_genomes_project 12 66773398 66776056 + MGP_BALBcJ_P0034882 9330151L19Rik protein_coding protein_coding MGP_BALBcJ_T0003385.1 MGP_BALBcJ_G0003108.1 mouse_genomes_project 12 77647996 77648301 + Gm28056 antisense antisense MGP_BALBcJ_T0035280.1 MGP_BALBcJ_G0019859.1 mouse_genomes_project 12 81789027 81795497 + MGP_BALBcJ_P0035280 Acot2 protein_coding protein_coding MGP_BALBcJ_T0099309.1 MGP_BALBcJ_G0037345.1 mouse_genomes_project 12 9785968 9786075 + Gm25538 snRNA snRNA MGP_BALBcJ_T0036015.1 MGP_BALBcJ_G0020098.1 mouse_genomes_project 12 111153058 111156980 + MGP_BALBcJ_P0036015 Zbtb42 protein_coding protein_coding MGP_BALBcJ_T0036016.1 MGP_BALBcJ_G0020098.1 mouse_genomes_project 12 111153070 111156980 + MGP_BALBcJ_P0036016 Zbtb42 protein_coding protein_coding MGP_BALBcJ_T0036017.1 MGP_BALBcJ_G0020098.1 mouse_genomes_project 12 111153108 111154203 + MGP_BALBcJ_P0036017 Zbtb42 protein_coding protein_coding MGP_BALBcJ_T0035066.1 MGP_BALBcJ_G0019790.1 mouse_genomes_project 12 73874773 73919234 - MGP_BALBcJ_P0035066 Tex21 protein_coding protein_coding MGP_BALBcJ_T0100603.1 MGP_BALBcJ_G0038639.1 mouse_genomes_project 12 108032273 108032346 + AF357425 snoRNA snoRNA MGP_BALBcJ_T0000847.1 MGP_BALBcJ_G0000779.1 mouse_genomes_project 12 8295052 8295801 - TEC TEC MGP_BALBcJ_T0035763.1 MGP_BALBcJ_G0020010.1 mouse_genomes_project 12 102354924 102357491 + MGP_BALBcJ_P0035763 protein_coding protein_coding MGP_BALBcJ_T0035768.1 MGP_BALBcJ_G0020010.1 mouse_genomes_project 12 102356099 102361350 + MGP_BALBcJ_P0035768 protein_coding protein_coding MGP_BALBcJ_T0012808.1 MGP_BALBcJ_G0010905.1 mouse_genomes_project 12 79285055 79285491 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000854.1 MGP_BALBcJ_G0000786.1 mouse_genomes_project 12 70584147 70584966 + TEC TEC MGP_BALBcJ_T0036080.1 MGP_BALBcJ_G0020119.1 mouse_genomes_project 12 115143205 115197112 - MGP_BALBcJ_P0036080 Wdr60 protein_coding protein_coding MGP_BALBcJ_T0000101.1 MGP_BALBcJ_G0000078.1 mouse_genomes_project 12 113280824 113281302 - MGP_BALBcJ_P0000101 Ighv1-5 IG_V_gene IG_V_gene MGP_BALBcJ_T0000102.1 MGP_BALBcJ_G0000078.1 mouse_genomes_project 12 113280824 113281118 - MGP_BALBcJ_P0000102 Ighv1-5 IG_V_gene IG_V_gene MGP_BALBcJ_T0102177.1 MGP_BALBcJ_G0039993.1 mouse_genomes_project 12 101694060 101699138 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0034892.1 MGP_BALBcJ_G0019732.1 mouse_genomes_project 12 66891833 66937271 - MGP_BALBcJ_P0034892 Nemf protein_coding protein_coding MGP_BALBcJ_T0000008.1 MGP_BALBcJ_G0000006.1 mouse_genomes_project 12 111805110 111806759 - MGP_BALBcJ_P0000008 Ighg2b IG_C_gene IG_C_gene MGP_BALBcJ_T0006378.1 MGP_BALBcJ_G0005318.1 mouse_genomes_project 12 28841790 28842468 - Gm29541 lincRNA lincRNA MGP_BALBcJ_T0035033.1 MGP_BALBcJ_G0019781.1 mouse_genomes_project 12 71951917 71954912 + MGP_BALBcJ_P0035033 Dbpht2 protein_coding protein_coding MGP_BALBcJ_T0098314.1 MGP_BALBcJ_G0036368.1 mouse_genomes_project 12 6498543 6499097 + pseudogene pseudogene MGP_BALBcJ_T0035202.1 MGP_BALBcJ_G0019842.1 mouse_genomes_project 12 79272798 79290824 - MGP_BALBcJ_P0035202 Med6 protein_coding protein_coding MGP_BALBcJ_T0035203.1 MGP_BALBcJ_G0019842.1 mouse_genomes_project 12 79272935 79273986 - Med6 protein_coding retained_intron MGP_BALBcJ_T0035204.1 MGP_BALBcJ_G0019842.1 mouse_genomes_project 12 79281192 79290871 - Med6 protein_coding retained_intron MGP_BALBcJ_T0000107.1 MGP_BALBcJ_G0000081.1 mouse_genomes_project 12 113413999 113414432 - MGP_BALBcJ_P0000107 Ighv1-11 IG_V_gene IG_V_gene MGP_BALBcJ_T0099042.1 MGP_BALBcJ_G0037082.1 mouse_genomes_project 12 70579084 70599118 + Gm26709 sense_overlapping sense_overlapping MGP_BALBcJ_T0003395.1 MGP_BALBcJ_G0003118.1 mouse_genomes_project 12 89013594 89042468 + 5430427M07Rik antisense antisense MGP_BALBcJ_T0000259.1 MGP_BALBcJ_G0000200.1 mouse_genomes_project 12 113860012 113860446 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034485.1 MGP_BALBcJ_G0019576.1 mouse_genomes_project 12 22045445 22051340 + MGP_BALBcJ_P0034485 Rrm2 protein_coding protein_coding MGP_BALBcJ_T0034486.1 MGP_BALBcJ_G0019576.1 mouse_genomes_project 12 22045760 22046784 + Rrm2 protein_coding retained_intron MGP_BALBcJ_T0034487.1 MGP_BALBcJ_G0019576.1 mouse_genomes_project 12 22045956 22048958 + MGP_BALBcJ_P0034487 Rrm2 protein_coding protein_coding MGP_BALBcJ_T0034488.1 MGP_BALBcJ_G0019576.1 mouse_genomes_project 12 22046233 22050534 + MGP_BALBcJ_P0034488 Rrm2 protein_coding protein_coding MGP_BALBcJ_T0000063.1 MGP_BALBcJ_G0000048.1 mouse_genomes_project 12 112398296 112398818 - MGP_BALBcJ_P0000063 Ighv5-17 IG_V_gene IG_V_gene MGP_BALBcJ_T0102184.1 MGP_BALBcJ_G0040000.1 mouse_genomes_project 12 111863504 111864710 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0035131.1 MGP_BALBcJ_G0019818.1 mouse_genomes_project 12 76853802 76872031 - MGP_BALBcJ_P0035131 Rdh11 protein_coding protein_coding MGP_BALBcJ_T0035132.1 MGP_BALBcJ_G0019818.1 mouse_genomes_project 12 76855016 76870703 - MGP_BALBcJ_P0035132 Rdh11 protein_coding protein_coding MGP_BALBcJ_T0035133.1 MGP_BALBcJ_G0019818.1 mouse_genomes_project 12 76855630 76871531 - MGP_BALBcJ_P0035133 Rdh11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034692.1 MGP_BALBcJ_G0019653.1 mouse_genomes_project 12 41616886 41624469 + MGP_BALBcJ_P0034692 Pnpla8 protein_coding protein_coding MGP_BALBcJ_T0034693.1 MGP_BALBcJ_G0019653.1 mouse_genomes_project 12 41624151 41652523 + MGP_BALBcJ_P0034693 Pnpla8 protein_coding protein_coding MGP_BALBcJ_T0034694.1 MGP_BALBcJ_G0019653.1 mouse_genomes_project 12 41624245 41651779 + MGP_BALBcJ_P0034694 Pnpla8 protein_coding protein_coding MGP_BALBcJ_T0034695.1 MGP_BALBcJ_G0019653.1 mouse_genomes_project 12 41637801 41652024 + MGP_BALBcJ_P0034695 Pnpla8 protein_coding protein_coding MGP_BALBcJ_T0100556.1 MGP_BALBcJ_G0038592.1 mouse_genomes_project 12 10256716 10256851 - Gm24208 snoRNA snoRNA MGP_BALBcJ_T0012833.1 MGP_BALBcJ_G0010930.1 mouse_genomes_project 12 111656514 111657334 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000030.1 MGP_BALBcJ_G0000023.1 mouse_genomes_project 12 112048888 112048911 - MGP_BALBcJ_P0000030 Gm16968 IG_D_gene IG_D_gene MGP_BALBcJ_T0035024.1 MGP_BALBcJ_G0019777.1 mouse_genomes_project 12 71229295 71428678 + MGP_BALBcJ_P0035024 Prkch protein_coding protein_coding MGP_BALBcJ_T0035025.1 MGP_BALBcJ_G0019777.1 mouse_genomes_project 12 71229341 71411378 + MGP_BALBcJ_P0035025 Prkch protein_coding protein_coding MGP_BALBcJ_T0011310.1 MGP_BALBcJ_G0009435.1 mouse_genomes_project 12 74374028 74374310 + Gm24010 misc_RNA misc_RNA MGP_BALBcJ_T0034666.1 MGP_BALBcJ_G0019644.1 mouse_genomes_project 12 37419152 37496189 - MGP_BALBcJ_P0034666 Scin protein_coding protein_coding MGP_BALBcJ_T0034667.1 MGP_BALBcJ_G0019644.1 mouse_genomes_project 12 37419156 37496234 - MGP_BALBcJ_P0034667 Scin protein_coding protein_coding MGP_BALBcJ_T0034719.1 MGP_BALBcJ_G0019663.1 mouse_genomes_project 12 48681717 48753702 + MGP_BALBcJ_P0034719 Scfd1 protein_coding protein_coding MGP_BALBcJ_T0000071.1 MGP_BALBcJ_G0000055.1 mouse_genomes_project 12 112645152 112645630 - MGP_BALBcJ_P0000071 IG_V_gene IG_V_gene MGP_BALBcJ_T0035509.1 MGP_BALBcJ_G0019930.1 mouse_genomes_project 12 86165448 86177481 - MGP_BALBcJ_P0035509 protein_coding protein_coding MGP_BALBcJ_T0009821.1 MGP_BALBcJ_G0007946.1 mouse_genomes_project 12 107991676 107991738 + Mir136 miRNA miRNA MGP_BALBcJ_T0100563.1 MGP_BALBcJ_G0038599.1 mouse_genomes_project 12 28404335 28404468 + Gm25408 snoRNA snoRNA MGP_BALBcJ_T0000096.1 MGP_BALBcJ_G0000073.1 mouse_genomes_project 12 113174912 113175352 - MGP_BALBcJ_P0000096 Ighv8-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0035784.1 MGP_BALBcJ_G0020025.1 mouse_genomes_project 12 103382012 103397382 + MGP_BALBcJ_P0035784 Tcl1b1 protein_coding protein_coding MGP_BALBcJ_T0012821.1 MGP_BALBcJ_G0010918.1 mouse_genomes_project 12 99628649 99628992 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006382.1 MGP_BALBcJ_G0005321.1 mouse_genomes_project 12 30461705 30491901 + Gm16267 lincRNA lincRNA MGP_BALBcJ_T0009848.1 MGP_BALBcJ_G0007973.1 mouse_genomes_project 12 108120450 108120518 + Mir376a miRNA miRNA MGP_BALBcJ_T0006422.1 MGP_BALBcJ_G0005354.1 mouse_genomes_project 12 98928282 98936415 + A630072L19Rik lincRNA lincRNA MGP_BALBcJ_T0035284.1 MGP_BALBcJ_G0019862.1 mouse_genomes_project 12 81855037 81863070 + MGP_BALBcJ_P0035284 Acot3 protein_coding protein_coding MGP_BALBcJ_T0035285.1 MGP_BALBcJ_G0019862.1 mouse_genomes_project 12 81855044 81863070 + MGP_BALBcJ_P0035285 Acot3 protein_coding protein_coding MGP_BALBcJ_T0098489.1 MGP_BALBcJ_G0036543.1 mouse_genomes_project 12 103928387 103928516 + Gm22790 rRNA rRNA MGP_BALBcJ_T0035197.1 MGP_BALBcJ_G0019840.1 mouse_genomes_project 12 79199129 79208322 - Synj2bp protein_coding retained_intron MGP_BALBcJ_T0035198.1 MGP_BALBcJ_G0019840.1 mouse_genomes_project 12 79199359 79237740 - MGP_BALBcJ_P0035198 Synj2bp protein_coding protein_coding MGP_BALBcJ_T0035199.1 MGP_BALBcJ_G0019840.1 mouse_genomes_project 12 79207480 79214790 - MGP_BALBcJ_P0035199 Synj2bp protein_coding protein_coding MGP_BALBcJ_T0035200.1 MGP_BALBcJ_G0019840.1 mouse_genomes_project 12 79207610 79237841 - MGP_BALBcJ_P0035200 Synj2bp protein_coding protein_coding MGP_BALBcJ_T0035124.1 MGP_BALBcJ_G0019814.1 mouse_genomes_project 12 76716989 76767210 + MGP_BALBcJ_P0035124 Plekhh1 protein_coding protein_coding MGP_BALBcJ_T0034782.1 MGP_BALBcJ_G0019695.1 mouse_genomes_project 12 54055976 54057872 - MGP_BALBcJ_P0034782 Nkx2-9 protein_coding protein_coding MGP_BALBcJ_T0012782.1 MGP_BALBcJ_G0010879.1 mouse_genomes_project 12 46440898 46441909 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000247.1 MGP_BALBcJ_G0000188.1 mouse_genomes_project 12 113009156 113009589 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034791.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54686156 54768414 + Mipol1 protein_coding retained_intron MGP_BALBcJ_T0034792.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54686163 54816612 + Mipol1 protein_coding retained_intron MGP_BALBcJ_T0034793.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54686165 54786086 + Mipol1 protein_coding retained_intron MGP_BALBcJ_T0034794.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54686175 54969889 + MGP_BALBcJ_P0034794 Mipol1 protein_coding protein_coding MGP_BALBcJ_T0034795.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54686175 54924786 + MGP_BALBcJ_P0034795 Mipol1 protein_coding protein_coding MGP_BALBcJ_T0034796.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54686220 54829528 + Mipol1 protein_coding retained_intron MGP_BALBcJ_T0034797.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54737416 54969889 + MGP_BALBcJ_P0034797 Mipol1 protein_coding protein_coding MGP_BALBcJ_T0034798.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54737416 54934552 + MGP_BALBcJ_P0034798 Mipol1 protein_coding protein_coding MGP_BALBcJ_T0034799.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54765834 54767426 + Mipol1 protein_coding retained_intron MGP_BALBcJ_T0034800.1 MGP_BALBcJ_G0019699.1 mouse_genomes_project 12 54792434 54828947 + Mipol1 protein_coding processed_transcript MGP_BALBcJ_T0035570.1 MGP_BALBcJ_G0019946.1 mouse_genomes_project 12 96411405 96542740 - MGP_BALBcJ_P0035570 Kcnk10 protein_coding protein_coding MGP_BALBcJ_T0012785.1 MGP_BALBcJ_G0010882.1 mouse_genomes_project 12 49054028 49054339 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034968.1 MGP_BALBcJ_G0019759.1 mouse_genomes_project 12 69689174 69705761 - MGP_BALBcJ_P0034968 L3hypdh protein_coding protein_coding MGP_BALBcJ_T0034969.1 MGP_BALBcJ_G0019759.1 mouse_genomes_project 12 69692242 69705761 - L3hypdh protein_coding retained_intron MGP_BALBcJ_T0034970.1 MGP_BALBcJ_G0019759.1 mouse_genomes_project 12 69693010 69705340 - L3hypdh protein_coding processed_transcript MGP_BALBcJ_T0009876.1 MGP_BALBcJ_G0008001.1 mouse_genomes_project 12 111132538 111132613 - Mir6939 miRNA miRNA MGP_BALBcJ_T0099329.1 MGP_BALBcJ_G0037365.1 mouse_genomes_project 12 58193884 58193991 + Gm23059 snRNA snRNA MGP_BALBcJ_T0000860.1 MGP_BALBcJ_G0000792.1 mouse_genomes_project 12 87310885 87312795 - TEC TEC MGP_BALBcJ_T0012811.1 MGP_BALBcJ_G0010908.1 mouse_genomes_project 12 82068941 82069583 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100620.1 MGP_BALBcJ_G0038656.1 mouse_genomes_project 12 108081338 108081411 + Gm23787 snoRNA snoRNA MGP_BALBcJ_T0034679.1 MGP_BALBcJ_G0019647.1 mouse_genomes_project 12 37583580 37586061 + MGP_BALBcJ_P0034679 Gm7008 protein_coding protein_coding MGP_BALBcJ_T0034680.1 MGP_BALBcJ_G0019647.1 mouse_genomes_project 12 37584186 37590007 + MGP_BALBcJ_P0034680 Gm7008 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034681.1 MGP_BALBcJ_G0019647.1 mouse_genomes_project 12 37584251 37589992 + MGP_BALBcJ_P0034681 Gm7008 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034775.1 MGP_BALBcJ_G0019690.1 mouse_genomes_project 12 53053203 53056305 + MGP_BALBcJ_P0034775 Insm2 protein_coding protein_coding MGP_BALBcJ_T0017275.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108000247 108003793 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017276.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108000252 108041657 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017277.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108000353 108023363 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017278.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108016610 108042602 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017279.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108016610 108030494 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017280.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108021418 108041723 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017281.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108029059 108032535 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017282.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108030220 108039726 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017283.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108030464 108042525 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017284.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108040203 108041704 + Rian processed_transcript TEC MGP_BALBcJ_T0017285.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108042402 108058088 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017286.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108042423 108051381 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017287.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108042902 108056179 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017288.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108045542 108046723 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017289.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108046440 108052241 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017290.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108047052 108057397 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017291.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108047056 108052262 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017292.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108047384 108056125 + Rian processed_transcript lincRNA MGP_BALBcJ_T0017293.1 MGP_BALBcJ_G0015177.1 mouse_genomes_project 12 108053659 108055502 + Rian processed_transcript TEC MGP_BALBcJ_T0009769.1 MGP_BALBcJ_G0007894.1 mouse_genomes_project 12 41553838 41553899 + Mir5627 miRNA miRNA MGP_BALBcJ_T0012801.1 MGP_BALBcJ_G0010898.1 mouse_genomes_project 12 71612705 71613011 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035837.1 MGP_BALBcJ_G0020044.1 mouse_genomes_project 12 106676224 106704880 + MGP_BALBcJ_P0035837 Cyp46a1 protein_coding protein_coding MGP_BALBcJ_T0006441.1 MGP_BALBcJ_G0005369.1 mouse_genomes_project 12 106054441 106066732 - 4930465M20Rik lincRNA lincRNA MGP_BALBcJ_T0006442.1 MGP_BALBcJ_G0005369.1 mouse_genomes_project 12 106060235 106066740 - 4930465M20Rik lincRNA lincRNA MGP_BALBcJ_T0009851.1 MGP_BALBcJ_G0007976.1 mouse_genomes_project 12 108124002 108124084 + Mir487b miRNA miRNA MGP_BALBcJ_T0009793.1 MGP_BALBcJ_G0007918.1 mouse_genomes_project 12 89088226 89088330 + Gm44370 miRNA miRNA MGP_BALBcJ_T0006406.1 MGP_BALBcJ_G0005338.1 mouse_genomes_project 12 78581736 78583790 - Gm26545 lincRNA lincRNA MGP_BALBcJ_T0099316.1 MGP_BALBcJ_G0037352.1 mouse_genomes_project 12 46326244 46326351 + Gm26454 snRNA snRNA MGP_BALBcJ_T0035242.1 MGP_BALBcJ_G0019851.1 mouse_genomes_project 12 81350138 81404712 - MGP_BALBcJ_P0035242 Zfyve1 protein_coding protein_coding MGP_BALBcJ_T0006380.1 MGP_BALBcJ_G0005320.1 mouse_genomes_project 12 30260545 30296567 - 4933406C10Rik lincRNA lincRNA MGP_BALBcJ_T0006381.1 MGP_BALBcJ_G0005320.1 mouse_genomes_project 12 30266111 30296561 - 4933406C10Rik lincRNA lincRNA MGP_BALBcJ_T0034330.1 MGP_BALBcJ_G0019520.1 mouse_genomes_project 12 1796358 1826964 - MGP_BALBcJ_P0034330 Ubxn2a protein_coding protein_coding MGP_BALBcJ_T0034331.1 MGP_BALBcJ_G0019520.1 mouse_genomes_project 12 1796675 1826523 - MGP_BALBcJ_P0034331 Ubxn2a protein_coding protein_coding MGP_BALBcJ_T0034332.1 MGP_BALBcJ_G0019520.1 mouse_genomes_project 12 1797716 1826698 - MGP_BALBcJ_P0034332 Ubxn2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000112.1 MGP_BALBcJ_G0000085.1 mouse_genomes_project 12 114915213 114915614 - MGP_BALBcJ_P0000112 IG_V_gene IG_V_gene MGP_BALBcJ_T0000073.1 MGP_BALBcJ_G0000057.1 mouse_genomes_project 12 112699667 112699916 - MGP_BALBcJ_P0000073 IG_V_gene IG_V_gene MGP_BALBcJ_T0100572.1 MGP_BALBcJ_G0038608.1 mouse_genomes_project 12 42420588 42420719 + Gm24731 snoRNA snoRNA MGP_BALBcJ_T0000253.1 MGP_BALBcJ_G0000194.1 mouse_genomes_project 12 113315161 113315460 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0003394.1 MGP_BALBcJ_G0003117.1 mouse_genomes_project 12 82923233 82925088 + Prox2os antisense antisense MGP_BALBcJ_T0099306.1 MGP_BALBcJ_G0037342.1 mouse_genomes_project 12 1683469 1683556 + Gm22003 snRNA snRNA MGP_BALBcJ_T0035031.1 MGP_BALBcJ_G0019780.1 mouse_genomes_project 12 71650036 71920813 + MGP_BALBcJ_P0035031 Syt16 protein_coding protein_coding MGP_BALBcJ_T0035032.1 MGP_BALBcJ_G0019780.1 mouse_genomes_project 12 71813747 71920809 + MGP_BALBcJ_P0035032 Syt16 protein_coding unknown_likely_coding MGP_BALBcJ_T0000006.1 MGP_BALBcJ_G0000004.1 mouse_genomes_project 12 111765802 111767876 - MGP_BALBcJ_P0000006 Ighe IG_C_gene IG_C_gene MGP_BALBcJ_T0100594.1 MGP_BALBcJ_G0038630.1 mouse_genomes_project 12 85323397 85323533 - Mir3068 snoRNA snoRNA MGP_BALBcJ_T0034967.1 MGP_BALBcJ_G0019758.1 mouse_genomes_project 12 69685364 69686738 - MGP_BALBcJ_P0034967 Gpr135 protein_coding protein_coding MGP_BALBcJ_T0099350.1 MGP_BALBcJ_G0037386.1 mouse_genomes_project 12 107223143 107223249 - Gm22079 snRNA snRNA MGP_BALBcJ_T0036000.1 MGP_BALBcJ_G0020092.1 mouse_genomes_project 12 110960422 110970902 + MGP_BALBcJ_P0036000 A530016L24Rik protein_coding protein_coding MGP_BALBcJ_T0034567.1 MGP_BALBcJ_G0019609.1 mouse_genomes_project 12 28999977 29290716 + MGP_BALBcJ_P0034567 Cog5 protein_coding protein_coding MGP_BALBcJ_T0034571.1 MGP_BALBcJ_G0019609.1 mouse_genomes_project 12 29110206 29278854 + MGP_BALBcJ_P0034571 Cog5 protein_coding unknown_likely_coding MGP_BALBcJ_T0035893.1 MGP_BALBcJ_G0020059.1 mouse_genomes_project 12 109078064 109093685 - MGP_BALBcJ_P0035893 1700001K19Rik protein_coding protein_coding MGP_BALBcJ_T0000865.1 MGP_BALBcJ_G0000797.1 mouse_genomes_project 12 111165218 111167821 - TEC TEC MGP_BALBcJ_T0034515.1 MGP_BALBcJ_G0019592.1 mouse_genomes_project 12 26892382 27296587 + MGP_BALBcJ_P0034515 Myt1l protein_coding protein_coding MGP_BALBcJ_T0034516.1 MGP_BALBcJ_G0019592.1 mouse_genomes_project 12 26898871 27296587 + MGP_BALBcJ_P0034516 Myt1l protein_coding protein_coding MGP_BALBcJ_T0035932.1 MGP_BALBcJ_G0020073.1 mouse_genomes_project 12 109843165 109856918 + MGP_BALBcJ_P0035932 Exoc3l4 protein_coding protein_coding MGP_BALBcJ_T0035803.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069372 104124447 + MGP_BALBcJ_P0035803 Papola protein_coding protein_coding MGP_BALBcJ_T0035804.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069382 104124579 + MGP_BALBcJ_P0035804 Papola protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035805.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069389 104095251 + Papola protein_coding processed_transcript MGP_BALBcJ_T0035806.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069394 104122772 + MGP_BALBcJ_P0035806 Papola protein_coding protein_coding MGP_BALBcJ_T0035807.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069411 104099792 + Papola protein_coding retained_intron MGP_BALBcJ_T0035808.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069416 104122499 + MGP_BALBcJ_P0035808 Papola protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035809.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069418 104095413 + Papola protein_coding processed_transcript MGP_BALBcJ_T0035810.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069421 104124584 + MGP_BALBcJ_P0035810 Papola protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035811.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069423 104091700 + MGP_BALBcJ_P0035811 Papola protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035812.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069435 104095413 + MGP_BALBcJ_P0035812 Papola protein_coding protein_coding MGP_BALBcJ_T0035813.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069550 104122914 + MGP_BALBcJ_P0035813 Papola protein_coding protein_coding MGP_BALBcJ_T0035814.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104069585 104124589 + MGP_BALBcJ_P0035814 Papola protein_coding protein_coding MGP_BALBcJ_T0035815.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104084798 104097135 + Papola protein_coding retained_intron MGP_BALBcJ_T0035816.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104094317 104106091 + MGP_BALBcJ_P0035816 Papola protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035817.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104095027 104095413 + Papola protein_coding retained_intron MGP_BALBcJ_T0035818.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104098022 104122751 + MGP_BALBcJ_P0035818 Papola protein_coding protein_coding MGP_BALBcJ_T0035819.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104098073 104114888 + MGP_BALBcJ_P0035819 Papola protein_coding protein_coding MGP_BALBcJ_T0035820.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104103587 104104538 + Papola protein_coding retained_intron MGP_BALBcJ_T0035821.1 MGP_BALBcJ_G0020036.1 mouse_genomes_project 12 104114708 104121139 + MGP_BALBcJ_P0035821 Papola protein_coding protein_coding MGP_BALBcJ_T0012783.1 MGP_BALBcJ_G0010880.1 mouse_genomes_project 12 47113686 47114681 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099340.1 MGP_BALBcJ_G0037376.1 mouse_genomes_project 12 75092363 75092523 + Gm25926 snRNA snRNA MGP_BALBcJ_T0099332.1 MGP_BALBcJ_G0037368.1 mouse_genomes_project 12 63075948 63076051 + Gm25599 snRNA snRNA MGP_BALBcJ_T0034238.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 292723 383757 + MGP_BALBcJ_P0034238 Asxl2 protein_coding protein_coding MGP_BALBcJ_T0034239.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 292723 383762 + MGP_BALBcJ_P0034239 Asxl2 protein_coding protein_coding MGP_BALBcJ_T0034240.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 292750 372544 + MGP_BALBcJ_P0034240 Asxl2 protein_coding protein_coding MGP_BALBcJ_T0034241.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 292767 379439 + MGP_BALBcJ_P0034241 Asxl2 protein_coding protein_coding MGP_BALBcJ_T0034242.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 292778 323351 + Asxl2 protein_coding retained_intron MGP_BALBcJ_T0034243.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 308865 372669 + MGP_BALBcJ_P0034243 Asxl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034244.1 MGP_BALBcJ_G0019499.1 mouse_genomes_project 12 370020 381659 + Asxl2 protein_coding processed_transcript MGP_BALBcJ_T0034853.1 MGP_BALBcJ_G0019717.1 mouse_genomes_project 12 62575746 62602838 + MGP_BALBcJ_P0034853 Prpf39 protein_coding protein_coding MGP_BALBcJ_T0034854.1 MGP_BALBcJ_G0019717.1 mouse_genomes_project 12 62575779 62602838 + MGP_BALBcJ_P0034854 Prpf39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034855.1 MGP_BALBcJ_G0019717.1 mouse_genomes_project 12 62583204 62600940 + MGP_BALBcJ_P0034855 Prpf39 protein_coding unknown_likely_coding MGP_BALBcJ_T0098744.1 MGP_BALBcJ_G0036798.1 mouse_genomes_project 12 29212069 29212204 + Gm25913 scaRNA scaRNA MGP_BALBcJ_T0012843.1 MGP_BALBcJ_G0010940.1 mouse_genomes_project 12 116738930 116739275 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034526.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27536444 27736872 - MGP_BALBcJ_P0034526 Sntg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034527.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27536445 27736919 - MGP_BALBcJ_P0034527 Sntg2 protein_coding protein_coding MGP_BALBcJ_T0034528.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27536952 27736809 - MGP_BALBcJ_P0034528 Sntg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034529.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27536957 27736872 - MGP_BALBcJ_P0034529 Sntg2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034530.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27552252 27558547 - Sntg2 protein_coding retained_intron MGP_BALBcJ_T0034531.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27625297 27720459 - Sntg2 protein_coding processed_transcript MGP_BALBcJ_T0034532.1 MGP_BALBcJ_G0019595.1 mouse_genomes_project 12 27667369 27736887 - Sntg2 protein_coding processed_transcript MGP_BALBcJ_T0034511.1 MGP_BALBcJ_G0019590.1 mouse_genomes_project 12 26066947 26127047 - MGP_BALBcJ_P0034511 Trappc12 protein_coding protein_coding MGP_BALBcJ_T0034512.1 MGP_BALBcJ_G0019590.1 mouse_genomes_project 12 26066947 26126988 - MGP_BALBcJ_P0034512 Trappc12 protein_coding protein_coding MGP_BALBcJ_T0034513.1 MGP_BALBcJ_G0019590.1 mouse_genomes_project 12 26086110 26127047 - MGP_BALBcJ_P0034513 Trappc12 protein_coding protein_coding MGP_BALBcJ_T0012809.1 MGP_BALBcJ_G0010906.1 mouse_genomes_project 12 80319715 80320065 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100618.1 MGP_BALBcJ_G0038654.1 mouse_genomes_project 12 108078770 108078845 + Gm22981 snoRNA snoRNA MGP_BALBcJ_T0034820.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56590283 56652244 + MGP_BALBcJ_P0034820 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034821.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56590309 56652241 + MGP_BALBcJ_P0034821 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034822.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56590326 56652244 + MGP_BALBcJ_P0034822 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034823.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56590328 56610843 + MGP_BALBcJ_P0034823 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034824.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56590348 56652290 + MGP_BALBcJ_P0034824 Ctage5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034825.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56590373 56630300 + MGP_BALBcJ_P0034825 Ctage5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034826.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56591585 56608127 + MGP_BALBcJ_P0034826 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034827.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56591849 56653669 + MGP_BALBcJ_P0034827 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034828.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56592016 56652241 + MGP_BALBcJ_P0034828 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034829.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56592044 56606230 + Ctage5 protein_coding retained_intron MGP_BALBcJ_T0034830.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56592048 56652249 + MGP_BALBcJ_P0034830 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034831.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56592065 56652290 + MGP_BALBcJ_P0034831 Ctage5 protein_coding protein_coding MGP_BALBcJ_T0034832.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56596661 56652020 + MGP_BALBcJ_P0034832 Ctage5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034833.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56610815 56652020 + MGP_BALBcJ_P0034833 Ctage5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034834.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56624243 56645879 + MGP_BALBcJ_P0034834 Ctage5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034835.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56628143 56637093 + Ctage5 protein_coding retained_intron MGP_BALBcJ_T0034836.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56630213 56651708 + Ctage5 protein_coding retained_intron MGP_BALBcJ_T0034837.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56630342 56632408 + Ctage5 protein_coding retained_intron MGP_BALBcJ_T0034838.1 MGP_BALBcJ_G0019709.1 mouse_genomes_project 12 56641095 56650587 + Ctage5 protein_coding retained_intron MGP_BALBcJ_T0006392.1 MGP_BALBcJ_G0005328.1 mouse_genomes_project 12 67435521 67441722 + 4931403G20Rik lincRNA lincRNA MGP_BALBcJ_T0035737.1 MGP_BALBcJ_G0019997.1 mouse_genomes_project 12 101664317 101671641 - MGP_BALBcJ_P0035737 Serpina16 protein_coding protein_coding MGP_BALBcJ_T0035738.1 MGP_BALBcJ_G0019997.1 mouse_genomes_project 12 101664405 101670966 - MGP_BALBcJ_P0035738 Serpina16 protein_coding protein_coding MGP_BALBcJ_T0009853.1 MGP_BALBcJ_G0007978.1 mouse_genomes_project 12 108124798 108124872 + Mir539 miRNA miRNA MGP_BALBcJ_T0006370.1 MGP_BALBcJ_G0005313.1 mouse_genomes_project 12 18643305 18644986 + Gm4419 lincRNA lincRNA MGP_BALBcJ_T0034499.1 MGP_BALBcJ_G0019582.1 mouse_genomes_project 12 23807699 23818543 + MGP_BALBcJ_P0034499 Cmpk2 protein_coding protein_coding MGP_BALBcJ_T0036035.1 MGP_BALBcJ_G0020111.1 mouse_genomes_project 12 111558520 111573240 + MGP_BALBcJ_P0036035 Tex22 protein_coding protein_coding MGP_BALBcJ_T0036036.1 MGP_BALBcJ_G0020111.1 mouse_genomes_project 12 111558520 111573238 + MGP_BALBcJ_P0036036 Tex22 protein_coding protein_coding MGP_BALBcJ_T0036037.1 MGP_BALBcJ_G0020111.1 mouse_genomes_project 12 111558774 111573241 + MGP_BALBcJ_P0036037 Tex22 protein_coding protein_coding MGP_BALBcJ_T0036038.1 MGP_BALBcJ_G0020111.1 mouse_genomes_project 12 111558796 111559390 + MGP_BALBcJ_P0036038 Tex22 protein_coding protein_coding MGP_BALBcJ_T0034848.1 MGP_BALBcJ_G0019712.1 mouse_genomes_project 12 60198819 60199242 + MGP_BALBcJ_P0034848 Spanxn4 protein_coding protein_coding MGP_BALBcJ_T0034883.1 MGP_BALBcJ_G0019729.1 mouse_genomes_project 12 66777970 66804841 - MGP_BALBcJ_P0034883 Pole2 protein_coding protein_coding MGP_BALBcJ_T0034906.1 MGP_BALBcJ_G0019739.1 mouse_genomes_project 12 67331387 67377002 - MGP_BALBcJ_P0034906 Cdkl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0006477.1 MGP_BALBcJ_G0005383.1 mouse_genomes_project 12 110015884 110017966 - 2810029C07Rik lincRNA lincRNA MGP_BALBcJ_T0000037.1 MGP_BALBcJ_G0000030.1 mouse_genomes_project 12 111926953 111927001 - MGP_BALBcJ_P0000037 Ighj2 IG_J_gene IG_J_gene MGP_BALBcJ_T0000038.1 MGP_BALBcJ_G0000030.1 mouse_genomes_project 12 111926999 111927053 - Ighj2 IG_J_gene processed_transcript MGP_BALBcJ_T0009807.1 MGP_BALBcJ_G0007932.1 mouse_genomes_project 12 107968549 107968640 + Mir673 miRNA miRNA MGP_BALBcJ_T0017274.1 MGP_BALBcJ_G0015176.1 mouse_genomes_project 12 102038464 102051349 - Gm28577 processed_transcript processed_transcript MGP_BALBcJ_T0102182.1 MGP_BALBcJ_G0039998.1 mouse_genomes_project 12 102270269 102278050 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100573.1 MGP_BALBcJ_G0038609.1 mouse_genomes_project 12 43285065 43285272 + Gm24948 snoRNA snoRNA MGP_BALBcJ_T0000245.1 MGP_BALBcJ_G0000186.1 mouse_genomes_project 12 112866740 112867016 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0006425.1 MGP_BALBcJ_G0005357.1 mouse_genomes_project 12 103103848 103104490 - Gm28875 lincRNA lincRNA MGP_BALBcJ_T0034309.1 MGP_BALBcJ_G0019510.1 mouse_genomes_project 12 1513266 1513368 - MGP_BALBcJ_P0034309 Gm3625 protein_coding protein_coding MGP_BALBcJ_T0006407.1 MGP_BALBcJ_G0005339.1 mouse_genomes_project 12 78618025 78619043 - 1700052I22Rik lincRNA lincRNA MGP_BALBcJ_T0034550.1 MGP_BALBcJ_G0019603.1 mouse_genomes_project 12 28673549 28693484 - MGP_BALBcJ_P0034550 Dld protein_coding protein_coding MGP_BALBcJ_T0035398.1 MGP_BALBcJ_G0019898.1 mouse_genomes_project 12 83319319 83322700 + MGP_BALBcJ_P0035398 Fos protein_coding protein_coding MGP_BALBcJ_T0035399.1 MGP_BALBcJ_G0019898.1 mouse_genomes_project 12 83320120 83321434 + Fos protein_coding processed_transcript MGP_BALBcJ_T0035400.1 MGP_BALBcJ_G0019898.1 mouse_genomes_project 12 83320120 83321612 + Fos protein_coding processed_transcript MGP_BALBcJ_T0035401.1 MGP_BALBcJ_G0019898.1 mouse_genomes_project 12 83320340 83321490 + Fos protein_coding processed_transcript MGP_BALBcJ_T0035924.1 MGP_BALBcJ_G0020069.1 mouse_genomes_project 12 109592863 109666289 + MGP_BALBcJ_P0035924 Traf3 protein_coding protein_coding MGP_BALBcJ_T0035925.1 MGP_BALBcJ_G0020069.1 mouse_genomes_project 12 109647034 109695090 + MGP_BALBcJ_P0035925 Traf3 protein_coding protein_coding MGP_BALBcJ_T0035926.1 MGP_BALBcJ_G0020069.1 mouse_genomes_project 12 109647034 109695086 + MGP_BALBcJ_P0035926 Traf3 protein_coding protein_coding MGP_BALBcJ_T0035927.1 MGP_BALBcJ_G0020069.1 mouse_genomes_project 12 109664773 109695095 + MGP_BALBcJ_P0035927 Traf3 protein_coding protein_coding MGP_BALBcJ_T0035928.1 MGP_BALBcJ_G0020069.1 mouse_genomes_project 12 109675600 109690502 + Traf3 protein_coding retained_intron MGP_BALBcJ_T0009825.1 MGP_BALBcJ_G0007950.1 mouse_genomes_project 12 108014541 108014620 + Mir370 miRNA miRNA MGP_BALBcJ_T0035396.1 MGP_BALBcJ_G0019896.1 mouse_genomes_project 12 83146322 83186607 - MGP_BALBcJ_P0035396 Nek9 protein_coding protein_coding MGP_BALBcJ_T0000085.1 MGP_BALBcJ_G0000065.1 mouse_genomes_project 12 112982877 112983308 - MGP_BALBcJ_P0000085 Ighv3-6 IG_V_gene IG_V_gene MGP_BALBcJ_T0000086.1 MGP_BALBcJ_G0000065.1 mouse_genomes_project 12 112982882 112983308 - MGP_BALBcJ_P0000086 Ighv3-6 IG_V_gene IG_V_gene MGP_BALBcJ_T0000009.1 MGP_BALBcJ_G0000007.1 mouse_genomes_project 12 111825036 111830322 - MGP_BALBcJ_P0000009 Ighg1 IG_C_gene IG_C_gene MGP_BALBcJ_T0000010.1 MGP_BALBcJ_G0000007.1 mouse_genomes_project 12 111828670 111830322 - MGP_BALBcJ_P0000010 Ighg1 IG_C_gene IG_C_gene MGP_BALBcJ_T0017260.1 MGP_BALBcJ_G0015165.1 mouse_genomes_project 12 30705526 30742206 - Atxn7l1os2 processed_transcript processed_transcript MGP_BALBcJ_T0012789.1 MGP_BALBcJ_G0010886.1 mouse_genomes_project 12 53817787 53818018 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009859.1 MGP_BALBcJ_G0007984.1 mouse_genomes_project 12 108131569 108131642 + Mir485 miRNA miRNA MGP_BALBcJ_T0011317.1 MGP_BALBcJ_G0009442.1 mouse_genomes_project 12 107934922 107935005 + Gm27596 misc_RNA misc_RNA MGP_BALBcJ_T0035460.1 MGP_BALBcJ_G0019913.1 mouse_genomes_project 12 84899766 84969685 + MGP_BALBcJ_P0035460 Tmem63c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035461.1 MGP_BALBcJ_G0019913.1 mouse_genomes_project 12 84904701 84969680 + MGP_BALBcJ_P0035461 Tmem63c protein_coding protein_coding MGP_BALBcJ_T0035462.1 MGP_BALBcJ_G0019913.1 mouse_genomes_project 12 84904973 84969675 + MGP_BALBcJ_P0035462 Tmem63c protein_coding protein_coding MGP_BALBcJ_T0035463.1 MGP_BALBcJ_G0019913.1 mouse_genomes_project 12 84905025 84936063 + MGP_BALBcJ_P0035463 Tmem63c protein_coding protein_coding MGP_BALBcJ_T0035464.1 MGP_BALBcJ_G0019913.1 mouse_genomes_project 12 84916917 84969683 + MGP_BALBcJ_P0035464 Tmem63c protein_coding protein_coding MGP_BALBcJ_T0000242.1 MGP_BALBcJ_G0000183.1 mouse_genomes_project 12 112506597 112507027 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0006375.1 MGP_BALBcJ_G0005315.1 mouse_genomes_project 12 25842422 25846657 - 1700022F17Rik lincRNA lincRNA MGP_BALBcJ_T0034685.1 MGP_BALBcJ_G0019650.1 mouse_genomes_project 12 38389183 39327288 + MGP_BALBcJ_P0034685 Immp2l protein_coding protein_coding MGP_BALBcJ_T0034686.1 MGP_BALBcJ_G0019650.1 mouse_genomes_project 12 38389219 38434816 + Immp2l protein_coding retained_intron MGP_BALBcJ_T0034687.1 MGP_BALBcJ_G0019650.1 mouse_genomes_project 12 38389220 38477647 + Immp2l protein_coding retained_intron MGP_BALBcJ_T0034688.1 MGP_BALBcJ_G0019650.1 mouse_genomes_project 12 38389422 39326942 + MGP_BALBcJ_P0034688 Immp2l protein_coding protein_coding MGP_BALBcJ_T0034689.1 MGP_BALBcJ_G0019650.1 mouse_genomes_project 12 38434242 38477633 + MGP_BALBcJ_P0034689 Immp2l protein_coding protein_coding MGP_BALBcJ_T0099348.1 MGP_BALBcJ_G0037384.1 mouse_genomes_project 12 96564706 96564769 + Gm25486 snRNA snRNA MGP_BALBcJ_T0009761.1 MGP_BALBcJ_G0007886.1 mouse_genomes_project 12 26054702 26054767 + Mir6937 miRNA miRNA MGP_BALBcJ_T0035114.1 MGP_BALBcJ_G0019809.1 mouse_genomes_project 12 76430255 76521256 + MGP_BALBcJ_P0035114 Mpp5 protein_coding unknown_likely_coding MGP_BALBcJ_T0099345.1 MGP_BALBcJ_G0037381.1 mouse_genomes_project 12 84523736 84523843 + Gm22004 snRNA snRNA MGP_BALBcJ_T0012823.1 MGP_BALBcJ_G0010920.1 mouse_genomes_project 12 99879135 99879595 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035687.1 MGP_BALBcJ_G0019984.1 mouse_genomes_project 12 100890025 100891254 + MGP_BALBcJ_P0035687 Cox8c protein_coding protein_coding MGP_BALBcJ_T0036034.1 MGP_BALBcJ_G0020110.1 mouse_genomes_project 12 111498071 111558420 + MGP_BALBcJ_P0036034 Pacs2 protein_coding protein_coding MGP_BALBcJ_T0035289.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81922088 81948495 + Dnal1 protein_coding processed_transcript MGP_BALBcJ_T0035290.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81922088 81952356 + MGP_BALBcJ_P0035290 Dnal1 protein_coding protein_coding MGP_BALBcJ_T0035291.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81922093 81947114 + MGP_BALBcJ_P0035291 Dnal1 protein_coding protein_coding MGP_BALBcJ_T0035292.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81922112 81949366 + MGP_BALBcJ_P0035292 Dnal1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035293.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81922113 81942641 + MGP_BALBcJ_P0035293 Dnal1 protein_coding protein_coding MGP_BALBcJ_T0035294.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81935572 81956337 + Dnal1 protein_coding retained_intron MGP_BALBcJ_T0035295.1 MGP_BALBcJ_G0019865.1 mouse_genomes_project 12 81944322 81945762 + MGP_BALBcJ_P0035295 Dnal1 protein_coding protein_coding MGP_BALBcJ_T0009860.1 MGP_BALBcJ_G0007985.1 mouse_genomes_project 12 108132286 108132368 + Mir453 miRNA miRNA MGP_BALBcJ_T0035782.1 MGP_BALBcJ_G0020024.1 mouse_genomes_project 12 103355110 103471293 + MGP_BALBcJ_P0035782 Tcl1b2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035783.1 MGP_BALBcJ_G0020024.1 mouse_genomes_project 12 103355124 103471295 + MGP_BALBcJ_P0035783 Tcl1b2 protein_coding protein_coding MGP_BALBcJ_T0034595.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30500443 30597507 + MGP_BALBcJ_P0034595 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034596.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30500461 30597507 + MGP_BALBcJ_P0034596 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034597.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30500504 30720472 + MGP_BALBcJ_P0034597 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034598.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30500513 30722937 + MGP_BALBcJ_P0034598 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034599.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30500524 30672520 + MGP_BALBcJ_P0034599 Atxn7l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034600.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30500555 30675236 + Atxn7l1 protein_coding retained_intron MGP_BALBcJ_T0034601.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30648943 30715555 + MGP_BALBcJ_P0034601 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034602.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30660683 30691720 + MGP_BALBcJ_P0034602 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034603.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30660695 30675236 + Atxn7l1 protein_coding retained_intron MGP_BALBcJ_T0034604.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30660806 30672450 + MGP_BALBcJ_P0034604 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034605.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30661803 30719639 + MGP_BALBcJ_P0034605 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034606.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30661811 30672591 + Atxn7l1 protein_coding retained_intron MGP_BALBcJ_T0034607.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30692084 30715560 + Atxn7l1 protein_coding retained_intron MGP_BALBcJ_T0034608.1 MGP_BALBcJ_G0019618.1 mouse_genomes_project 12 30714606 30720461 + MGP_BALBcJ_P0034608 Atxn7l1 protein_coding protein_coding MGP_BALBcJ_T0034588.1 MGP_BALBcJ_G0019616.1 mouse_genomes_project 12 30296668 30323474 + MGP_BALBcJ_P0034588 Sypl protein_coding protein_coding MGP_BALBcJ_T0034589.1 MGP_BALBcJ_G0019616.1 mouse_genomes_project 12 30296961 30321345 + MGP_BALBcJ_P0034589 Sypl protein_coding protein_coding MGP_BALBcJ_T0034590.1 MGP_BALBcJ_G0019616.1 mouse_genomes_project 12 30297024 30318592 + MGP_BALBcJ_P0034590 Sypl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034591.1 MGP_BALBcJ_G0019616.1 mouse_genomes_project 12 30297336 30312119 + Sypl protein_coding processed_transcript MGP_BALBcJ_T0034592.1 MGP_BALBcJ_G0019616.1 mouse_genomes_project 12 30308114 30314787 + Sypl protein_coding retained_intron MGP_BALBcJ_T0034593.1 MGP_BALBcJ_G0019616.1 mouse_genomes_project 12 30308194 30313886 + Sypl protein_coding processed_transcript MGP_BALBcJ_T0009869.1 MGP_BALBcJ_G0007994.1 mouse_genomes_project 12 108140372 108140453 + Mir410 miRNA miRNA MGP_BALBcJ_T0099311.1 MGP_BALBcJ_G0037347.1 mouse_genomes_project 12 11647919 11648026 + Gm25414 snRNA snRNA MGP_BALBcJ_T0036024.1 MGP_BALBcJ_G0020102.1 mouse_genomes_project 12 111278601 111285692 + MGP_BALBcJ_P0036024 BC022687 protein_coding protein_coding MGP_BALBcJ_T0036025.1 MGP_BALBcJ_G0020102.1 mouse_genomes_project 12 111278601 111286227 + MGP_BALBcJ_P0036025 BC022687 protein_coding protein_coding MGP_BALBcJ_T0006440.1 MGP_BALBcJ_G0005368.1 mouse_genomes_project 12 105507794 105510976 + Gm2800 lincRNA lincRNA MGP_BALBcJ_T0035034.1 MGP_BALBcJ_G0019782.1 mouse_genomes_project 12 72560598 72841134 - MGP_BALBcJ_P0035034 Kcnh5 protein_coding protein_coding MGP_BALBcJ_T0099322.1 MGP_BALBcJ_G0037358.1 mouse_genomes_project 12 52014987 52015151 + Gm22513 snRNA snRNA MGP_BALBcJ_T0009872.1 MGP_BALBcJ_G0007997.1 mouse_genomes_project 12 109085166 109085269 + Gm27299 miRNA miRNA MGP_BALBcJ_T0035922.1 MGP_BALBcJ_G0020067.1 mouse_genomes_project 12 109462695 109542066 + MGP_BALBcJ_P0035922 Rcor1 protein_coding protein_coding MGP_BALBcJ_T0035045.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73479919 73544243 + MGP_BALBcJ_P0035045 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035046.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73480103 73775507 + MGP_BALBcJ_P0035046 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035047.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73480103 73775524 + MGP_BALBcJ_P0035047 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035048.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73480108 73554684 + Syne2 protein_coding retained_intron MGP_BALBcJ_T0035049.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73480114 73572708 + MGP_BALBcJ_P0035049 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035050.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73480135 73569734 + Syne2 protein_coding retained_intron MGP_BALBcJ_T0035051.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73514959 73544065 + MGP_BALBcJ_P0035051 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035052.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73573048 73577718 + Syne2 protein_coding retained_intron MGP_BALBcJ_T0035053.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73686763 73692279 + MGP_BALBcJ_P0035053 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035054.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73696077 73775518 + MGP_BALBcJ_P0035054 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035055.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73713059 73775507 + MGP_BALBcJ_P0035055 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035056.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73724156 73730999 + Syne2 protein_coding retained_intron MGP_BALBcJ_T0035057.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73736497 73759043 + MGP_BALBcJ_P0035057 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035058.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73746262 73759653 + MGP_BALBcJ_P0035058 Syne2 protein_coding protein_coding MGP_BALBcJ_T0035059.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73746545 73762588 + MGP_BALBcJ_P0035059 Syne2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035060.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73752366 73775524 + MGP_BALBcJ_P0035060 Syne2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035061.1 MGP_BALBcJ_G0019788.1 mouse_genomes_project 12 73765507 73770599 + Syne2 protein_coding retained_intron MGP_BALBcJ_T0035012.1 MGP_BALBcJ_G0019772.1 mouse_genomes_project 12 70758897 70911312 + MGP_BALBcJ_P0035012 Mnat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035013.1 MGP_BALBcJ_G0019772.1 mouse_genomes_project 12 70758897 70912448 + MGP_BALBcJ_P0035013 Mnat1 protein_coding protein_coding MGP_BALBcJ_T0035014.1 MGP_BALBcJ_G0019772.1 mouse_genomes_project 12 70758897 70871862 + MGP_BALBcJ_P0035014 Mnat1 protein_coding protein_coding MGP_BALBcJ_T0035015.1 MGP_BALBcJ_G0019772.1 mouse_genomes_project 12 70759019 70911319 + MGP_BALBcJ_P0035015 Mnat1 protein_coding unknown_likely_coding MGP_BALBcJ_T0099318.1 MGP_BALBcJ_G0037354.1 mouse_genomes_project 12 49897233 49897340 + Gm24859 snRNA snRNA MGP_BALBcJ_T0034802.1 MGP_BALBcJ_G0019701.1 mouse_genomes_project 12 55041597 55098842 + MGP_BALBcJ_P0034802 protein_coding protein_coding MGP_BALBcJ_T0034803.1 MGP_BALBcJ_G0019701.1 mouse_genomes_project 12 55053257 55214175 + MGP_BALBcJ_P0034803 protein_coding protein_coding MGP_BALBcJ_T0034804.1 MGP_BALBcJ_G0019701.1 mouse_genomes_project 12 55125677 55127982 + MGP_BALBcJ_P0034804 protein_coding protein_coding MGP_BALBcJ_T0003384.1 MGP_BALBcJ_G0003107.1 mouse_genomes_project 12 71875674 71888241 - Gm29587 antisense antisense MGP_BALBcJ_T0034884.1 MGP_BALBcJ_G0019730.1 mouse_genomes_project 12 66820035 66821497 + Klhdc1 protein_coding processed_transcript MGP_BALBcJ_T0034885.1 MGP_BALBcJ_G0019730.1 mouse_genomes_project 12 66820688 66864780 + MGP_BALBcJ_P0034885 Klhdc1 protein_coding protein_coding MGP_BALBcJ_T0034886.1 MGP_BALBcJ_G0019730.1 mouse_genomes_project 12 66820770 66821499 + Klhdc1 protein_coding processed_transcript MGP_BALBcJ_T0034887.1 MGP_BALBcJ_G0019730.1 mouse_genomes_project 12 66820774 66863467 + MGP_BALBcJ_P0034887 Klhdc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0000255.1 MGP_BALBcJ_G0000196.1 mouse_genomes_project 12 113399595 113400032 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0009797.1 MGP_BALBcJ_G0007922.1 mouse_genomes_project 12 99542985 99543095 + Gm24542 miRNA miRNA MGP_BALBcJ_T0034394.1 MGP_BALBcJ_G0019547.1 mouse_genomes_project 12 10029195 10035014 - MGP_BALBcJ_P0034394 Mycn protein_coding protein_coding MGP_BALBcJ_T0034395.1 MGP_BALBcJ_G0019547.1 mouse_genomes_project 12 10029195 10033718 - MGP_BALBcJ_P0034395 Mycn protein_coding protein_coding MGP_BALBcJ_T0034396.1 MGP_BALBcJ_G0019547.1 mouse_genomes_project 12 10034045 10034925 - Mycn protein_coding processed_transcript MGP_BALBcJ_T0036022.1 MGP_BALBcJ_G0020101.1 mouse_genomes_project 12 111249194 111252015 - MGP_BALBcJ_P0036022 protein_coding protein_coding MGP_BALBcJ_T0036023.1 MGP_BALBcJ_G0020101.1 mouse_genomes_project 12 111249666 111272167 - MGP_BALBcJ_P0036023 protein_coding unknown_likely_coding MGP_BALBcJ_T0012774.1 MGP_BALBcJ_G0010871.1 mouse_genomes_project 12 5822619 5824996 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036033.1 MGP_BALBcJ_G0020109.1 mouse_genomes_project 12 111481950 111484748 + MGP_BALBcJ_P0036033 9230104M06Rik protein_coding protein_coding MGP_BALBcJ_T0036018.1 MGP_BALBcJ_G0020099.1 mouse_genomes_project 12 111196844 111221245 + MGP_BALBcJ_P0036018 Cep170b protein_coding protein_coding MGP_BALBcJ_T0036019.1 MGP_BALBcJ_G0020099.1 mouse_genomes_project 12 111196864 111221239 + MGP_BALBcJ_P0036019 Cep170b protein_coding protein_coding MGP_BALBcJ_T0036020.1 MGP_BALBcJ_G0020099.1 mouse_genomes_project 12 111196864 111221239 + MGP_BALBcJ_P0036020 Cep170b protein_coding protein_coding MGP_BALBcJ_T0035982.1 MGP_BALBcJ_G0020086.1 mouse_genomes_project 12 110410958 110416560 - MGP_BALBcJ_P0035982 2010107E04Rik protein_coding protein_coding MGP_BALBcJ_T0012805.1 MGP_BALBcJ_G0010902.1 mouse_genomes_project 12 76847454 76847803 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098472.1 MGP_BALBcJ_G0036526.1 mouse_genomes_project 12 9199822 9199953 + Gm26171 rRNA rRNA MGP_BALBcJ_T0036007.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111127082 111148507 - MGP_BALBcJ_P0036007 Akt1 protein_coding protein_coding MGP_BALBcJ_T0036008.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111127934 111145698 - MGP_BALBcJ_P0036008 Akt1 protein_coding protein_coding MGP_BALBcJ_T0036009.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111129104 111130235 - Akt1 protein_coding retained_intron MGP_BALBcJ_T0036010.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111130355 111132899 - Akt1 protein_coding retained_intron MGP_BALBcJ_T0036011.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111130823 111132404 - Akt1 protein_coding retained_intron MGP_BALBcJ_T0036012.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111131686 111149115 - MGP_BALBcJ_P0036012 Akt1 protein_coding protein_coding MGP_BALBcJ_T0036013.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111132421 111148081 - MGP_BALBcJ_P0036013 Akt1 protein_coding protein_coding MGP_BALBcJ_T0036014.1 MGP_BALBcJ_G0020097.1 mouse_genomes_project 12 111132527 111142248 - Akt1 protein_coding processed_transcript MGP_BALBcJ_T0006430.1 MGP_BALBcJ_G0005361.1 mouse_genomes_project 12 104876797 104892975 + Gm17033 lincRNA lincRNA MGP_BALBcJ_T0098479.1 MGP_BALBcJ_G0036533.1 mouse_genomes_project 12 51984737 51984847 - Gm24971 rRNA rRNA MGP_BALBcJ_T0012832.1 MGP_BALBcJ_G0010929.1 mouse_genomes_project 12 106785229 106785970 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100566.1 MGP_BALBcJ_G0038602.1 mouse_genomes_project 12 32220313 32220445 + Gm24429 snoRNA snoRNA MGP_BALBcJ_T0009871.1 MGP_BALBcJ_G0007996.1 mouse_genomes_project 12 108682625 108682707 - Mir1247 miRNA miRNA MGP_BALBcJ_T0035159.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639667 78645408 + MGP_BALBcJ_P0035159 Srsf5 protein_coding protein_coding MGP_BALBcJ_T0035160.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639683 78645404 + Srsf5 protein_coding retained_intron MGP_BALBcJ_T0035161.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639683 78645404 + MGP_BALBcJ_P0035161 Srsf5 protein_coding protein_coding MGP_BALBcJ_T0035162.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639695 78645404 + Srsf5 protein_coding retained_intron MGP_BALBcJ_T0035163.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639695 78645404 + MGP_BALBcJ_P0035163 Srsf5 protein_coding protein_coding MGP_BALBcJ_T0035164.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639695 78645404 + MGP_BALBcJ_P0035164 Srsf5 protein_coding protein_coding MGP_BALBcJ_T0035165.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639697 78641012 + Srsf5 protein_coding processed_transcript MGP_BALBcJ_T0035166.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639711 78643405 + Srsf5 protein_coding processed_transcript MGP_BALBcJ_T0035167.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639733 78642429 + MGP_BALBcJ_P0035167 Srsf5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035168.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639742 78641135 + Srsf5 protein_coding processed_transcript MGP_BALBcJ_T0035169.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78639748 78645404 + MGP_BALBcJ_P0035169 Srsf5 protein_coding protein_coding MGP_BALBcJ_T0035170.1 MGP_BALBcJ_G0019832.1 mouse_genomes_project 12 78640539 78645398 + Srsf5 protein_coding retained_intron MGP_BALBcJ_T0035086.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74428874 74592910 + MGP_BALBcJ_P0035086 Fntb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035087.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74428883 74592487 + MGP_BALBcJ_P0035087 Fntb protein_coding protein_coding MGP_BALBcJ_T0035097.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74506810 74593663 + MGP_BALBcJ_P0035097 Fntb protein_coding protein_coding MGP_BALBcJ_T0035098.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74506829 74516347 + Fntb protein_coding processed_transcript MGP_BALBcJ_T0035099.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74509691 74560449 + Fntb protein_coding processed_transcript MGP_BALBcJ_T0035100.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74559701 74582779 + Fntb protein_coding processed_transcript MGP_BALBcJ_T0035101.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74582018 74582858 + Fntb protein_coding processed_transcript MGP_BALBcJ_T0035102.1 MGP_BALBcJ_G0019800.1 mouse_genomes_project 12 74582524 74587184 + Fntb protein_coding retained_intron MGP_BALBcJ_T0100565.1 MGP_BALBcJ_G0038601.1 mouse_genomes_project 12 30797720 30797852 - Gm23529 snoRNA snoRNA MGP_BALBcJ_T0035744.1 MGP_BALBcJ_G0020001.1 mouse_genomes_project 12 101792614 101802960 - MGP_BALBcJ_P0035744 protein_coding protein_coding MGP_BALBcJ_T0035016.1 MGP_BALBcJ_G0019773.1 mouse_genomes_project 12 70919512 70925804 - MGP_BALBcJ_P0035016 Trmt5 protein_coding protein_coding MGP_BALBcJ_T0000023.1 MGP_BALBcJ_G0000017.1 mouse_genomes_project 12 111928013 111928024 - MGP_BALBcJ_P0000023 Ighd4-1 IG_D_gene IG_D_gene MGP_BALBcJ_T0034586.1 MGP_BALBcJ_G0019614.1 mouse_genomes_project 12 29727937 29732173 + MGP_BALBcJ_P0034586 Ccdc71l protein_coding protein_coding MGP_BALBcJ_T0035406.1 MGP_BALBcJ_G0019901.1 mouse_genomes_project 12 83595108 83663249 + MGP_BALBcJ_P0035406 Mfsd7c protein_coding protein_coding MGP_BALBcJ_T0003370.1 MGP_BALBcJ_G0003097.1 mouse_genomes_project 12 37559527 37561977 + Gm17056 antisense antisense MGP_BALBcJ_T0102179.1 MGP_BALBcJ_G0039995.1 mouse_genomes_project 12 101792643 101797394 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0034920.1 MGP_BALBcJ_G0019744.1 mouse_genomes_project 12 67603431 67695326 - MGP_BALBcJ_P0034920 Nin protein_coding protein_coding MGP_BALBcJ_T0034921.1 MGP_BALBcJ_G0019744.1 mouse_genomes_project 12 67610726 67695347 - MGP_BALBcJ_P0034921 Nin protein_coding protein_coding MGP_BALBcJ_T0034922.1 MGP_BALBcJ_G0019744.1 mouse_genomes_project 12 67610727 67704380 - MGP_BALBcJ_P0034922 Nin protein_coding protein_coding MGP_BALBcJ_T0034923.1 MGP_BALBcJ_G0019744.1 mouse_genomes_project 12 67610747 67704375 - MGP_BALBcJ_P0034923 Nin protein_coding protein_coding MGP_BALBcJ_T0034541.1 MGP_BALBcJ_G0019600.1 mouse_genomes_project 12 28420781 28426610 + MGP_BALBcJ_P0034541 Fam110c protein_coding protein_coding MGP_BALBcJ_T0099321.1 MGP_BALBcJ_G0037357.1 mouse_genomes_project 12 51557423 51557569 - Gm24692 snRNA snRNA MGP_BALBcJ_T0035157.1 MGP_BALBcJ_G0019830.1 mouse_genomes_project 12 78448858 78455354 - MGP_BALBcJ_P0035157 Ccdc177 protein_coding protein_coding MGP_BALBcJ_T0035857.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107220675 107253660 - MGP_BALBcJ_P0035857 Wars protein_coding protein_coding MGP_BALBcJ_T0035858.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107220675 107254636 - MGP_BALBcJ_P0035858 Wars protein_coding protein_coding MGP_BALBcJ_T0035859.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107220675 107254599 - MGP_BALBcJ_P0035859 Wars protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035860.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107220679 107253659 - MGP_BALBcJ_P0035860 Wars protein_coding protein_coding MGP_BALBcJ_T0035861.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107226450 107235754 - Wars protein_coding retained_intron MGP_BALBcJ_T0035862.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107235586 107254563 - MGP_BALBcJ_P0035862 Wars protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035863.1 MGP_BALBcJ_G0020051.1 mouse_genomes_project 12 107241217 107248879 - Wars protein_coding retained_intron MGP_BALBcJ_T0035109.1 MGP_BALBcJ_G0019807.1 mouse_genomes_project 12 75897994 76364006 + MGP_BALBcJ_P0035109 Gphn protein_coding protein_coding MGP_BALBcJ_T0035110.1 MGP_BALBcJ_G0019807.1 mouse_genomes_project 12 75897994 76364006 + MGP_BALBcJ_P0035110 Gphn protein_coding protein_coding MGP_BALBcJ_T0035111.1 MGP_BALBcJ_G0019807.1 mouse_genomes_project 12 75898117 76364005 + MGP_BALBcJ_P0035111 Gphn protein_coding unknown_likely_coding MGP_BALBcJ_T0035112.1 MGP_BALBcJ_G0019807.1 mouse_genomes_project 12 75985952 76364005 + MGP_BALBcJ_P0035112 Gphn protein_coding unknown_likely_coding MGP_BALBcJ_T0099338.1 MGP_BALBcJ_G0037374.1 mouse_genomes_project 12 74101775 74101849 - Gm25563 snRNA snRNA MGP_BALBcJ_T0035845.1 MGP_BALBcJ_G0020046.1 mouse_genomes_project 12 106900752 107038294 + MGP_BALBcJ_P0035845 Evl protein_coding protein_coding MGP_BALBcJ_T0035846.1 MGP_BALBcJ_G0020046.1 mouse_genomes_project 12 106900752 107038294 + MGP_BALBcJ_P0035846 Evl protein_coding protein_coding MGP_BALBcJ_T0035847.1 MGP_BALBcJ_G0020046.1 mouse_genomes_project 12 106945912 107038294 + MGP_BALBcJ_P0035847 Evl protein_coding protein_coding MGP_BALBcJ_T0035848.1 MGP_BALBcJ_G0020046.1 mouse_genomes_project 12 106975875 107038294 + MGP_BALBcJ_P0035848 Evl protein_coding protein_coding MGP_BALBcJ_T0000252.1 MGP_BALBcJ_G0000193.1 mouse_genomes_project 12 113300493 113300786 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0100605.1 MGP_BALBcJ_G0038641.1 mouse_genomes_project 12 108040009 108040080 + Gm23600 snoRNA snoRNA MGP_BALBcJ_T0035506.1 MGP_BALBcJ_G0019927.1 mouse_genomes_project 12 86006368 86006797 + MGP_BALBcJ_P0035506 Gm10264 protein_coding protein_coding MGP_BALBcJ_T0009772.1 MGP_BALBcJ_G0007897.1 mouse_genomes_project 12 56700575 56700645 - Gm27284 miRNA miRNA MGP_BALBcJ_T0006411.1 MGP_BALBcJ_G0005343.1 mouse_genomes_project 12 84023122 84050086 + Gm805 lincRNA lincRNA MGP_BALBcJ_T0009819.1 MGP_BALBcJ_G0007944.1 mouse_genomes_project 12 107991173 107991248 + Mir432 miRNA miRNA MGP_BALBcJ_T0036102.1 MGP_BALBcJ_G0020129.1 mouse_genomes_project 12 118076419 118166540 - MGP_BALBcJ_P0036102 Itgb8 protein_coding protein_coding MGP_BALBcJ_T0036103.1 MGP_BALBcJ_G0020129.1 mouse_genomes_project 12 118108113 118166539 - Itgb8 protein_coding retained_intron MGP_BALBcJ_T0036104.1 MGP_BALBcJ_G0020129.1 mouse_genomes_project 12 118123293 118166508 - Itgb8 protein_coding retained_intron MGP_BALBcJ_T0009828.1 MGP_BALBcJ_G0007953.1 mouse_genomes_project 12 108106855 108106937 + Mir411 miRNA miRNA MGP_BALBcJ_T0035480.1 MGP_BALBcJ_G0019921.1 mouse_genomes_project 12 85150757 85158009 + MGP_BALBcJ_P0035480 Ahsa1 protein_coding protein_coding MGP_BALBcJ_T0000007.1 MGP_BALBcJ_G0000005.1 mouse_genomes_project 12 111781903 111783530 - MGP_BALBcJ_P0000007 Ighg2c IG_C_gene IG_C_gene MGP_BALBcJ_T0035761.1 MGP_BALBcJ_G0020008.1 mouse_genomes_project 12 102207260 102218700 + MGP_BALBcJ_P0035761 Serpina3b protein_coding protein_coding MGP_BALBcJ_T0099343.1 MGP_BALBcJ_G0037379.1 mouse_genomes_project 12 78315685 78315789 - Gm23817 snRNA snRNA MGP_BALBcJ_T0035951.1 MGP_BALBcJ_G0020079.1 mouse_genomes_project 12 110124136 110129941 + MGP_BALBcJ_P0035951 Trmt61a protein_coding protein_coding MGP_BALBcJ_T0035952.1 MGP_BALBcJ_G0020079.1 mouse_genomes_project 12 110124136 110129941 + MGP_BALBcJ_P0035952 Trmt61a protein_coding protein_coding MGP_BALBcJ_T0035472.1 MGP_BALBcJ_G0019918.1 mouse_genomes_project 12 85083037 85092611 + Samd15 protein_coding retained_intron MGP_BALBcJ_T0035473.1 MGP_BALBcJ_G0019918.1 mouse_genomes_project 12 85083081 85092289 + Samd15 protein_coding processed_transcript MGP_BALBcJ_T0035474.1 MGP_BALBcJ_G0019918.1 mouse_genomes_project 12 85083869 85097101 + MGP_BALBcJ_P0035474 Samd15 protein_coding protein_coding MGP_BALBcJ_T0035475.1 MGP_BALBcJ_G0019918.1 mouse_genomes_project 12 85084076 85085270 + MGP_BALBcJ_P0035475 Samd15 protein_coding protein_coding MGP_BALBcJ_T0034839.1 MGP_BALBcJ_G0019710.1 mouse_genomes_project 12 56662214 56685867 - MGP_BALBcJ_P0034839 Fbxo33 protein_coding protein_coding MGP_BALBcJ_T0034840.1 MGP_BALBcJ_G0019710.1 mouse_genomes_project 12 56662216 56665997 - MGP_BALBcJ_P0034840 Fbxo33 protein_coding protein_coding MGP_BALBcJ_T0034841.1 MGP_BALBcJ_G0019710.1 mouse_genomes_project 12 56662217 56667250 - Fbxo33 protein_coding retained_intron MGP_BALBcJ_T0034842.1 MGP_BALBcJ_G0019710.1 mouse_genomes_project 12 56666112 56684943 - MGP_BALBcJ_P0034842 Fbxo33 protein_coding protein_coding MGP_BALBcJ_T0035339.1 MGP_BALBcJ_G0019876.1 mouse_genomes_project 12 82268522 82347992 + MGP_BALBcJ_P0035339 Lin52 protein_coding protein_coding MGP_BALBcJ_T0009883.1 MGP_BALBcJ_G0008008.1 mouse_genomes_project 12 115180066 115180122 - Gm23190 miRNA miRNA MGP_BALBcJ_T0034346.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706375 5784339 + MGP_BALBcJ_P0034346 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034347.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706375 5785466 + MGP_BALBcJ_P0034347 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034348.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706386 5783205 + MGP_BALBcJ_P0034348 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034349.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706465 5785446 + MGP_BALBcJ_P0034349 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034350.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706500 5739641 + Pum2 protein_coding processed_transcript MGP_BALBcJ_T0034351.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706516 5785442 + MGP_BALBcJ_P0034351 Pum2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034352.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706545 5785439 + MGP_BALBcJ_P0034352 Pum2 protein_coding unknown_likely_coding MGP_BALBcJ_T0034353.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706662 5782886 + MGP_BALBcJ_P0034353 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034354.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706711 5782913 + MGP_BALBcJ_P0034354 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034355.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706922 5785466 + MGP_BALBcJ_P0034355 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034356.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5706977 5745907 + MGP_BALBcJ_P0034356 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034357.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5707006 5745676 + MGP_BALBcJ_P0034357 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034358.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5709775 5741763 + MGP_BALBcJ_P0034358 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034359.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5730594 5746190 + MGP_BALBcJ_P0034359 Pum2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034360.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5742498 5753875 + MGP_BALBcJ_P0034360 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034361.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5761223 5781121 + MGP_BALBcJ_P0034361 Pum2 protein_coding protein_coding MGP_BALBcJ_T0034362.1 MGP_BALBcJ_G0019529.1 mouse_genomes_project 12 5775551 5776471 + Pum2 protein_coding retained_intron MGP_BALBcJ_T0035727.1 MGP_BALBcJ_G0019993.1 mouse_genomes_project 12 101439450 101440964 - MGP_BALBcJ_P0035727 Ifi27l2a protein_coding protein_coding MGP_BALBcJ_T0100561.1 MGP_BALBcJ_G0038597.1 mouse_genomes_project 12 24982516 24982641 + Gm24326 snoRNA snoRNA MGP_BALBcJ_T0100617.1 MGP_BALBcJ_G0038653.1 mouse_genomes_project 12 108077905 108077980 + AF357341 snoRNA snoRNA MGP_BALBcJ_T0035999.1 MGP_BALBcJ_G0020091.1 mouse_genomes_project 12 110882718 110894450 - MGP_BALBcJ_P0035999 A730018C14Rik protein_coding protein_coding MGP_BALBcJ_T0098317.1 MGP_BALBcJ_G0036371.1 mouse_genomes_project 12 81891739 81892350 - pseudogene pseudogene MGP_BALBcJ_T0034966.1 MGP_BALBcJ_G0019757.1 mouse_genomes_project 12 69439450 69596824 + MGP_BALBcJ_P0034966 Daam1 protein_coding protein_coding MGP_BALBcJ_T0035777.1 MGP_BALBcJ_G0020020.1 mouse_genomes_project 12 102938092 103041528 - MGP_BALBcJ_P0035777 Clmn protein_coding protein_coding MGP_BALBcJ_T0035778.1 MGP_BALBcJ_G0020020.1 mouse_genomes_project 12 102938092 103041528 - MGP_BALBcJ_P0035778 Clmn protein_coding protein_coding MGP_BALBcJ_T0006460.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108126431 108146551 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006461.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108126432 108127509 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006462.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108126943 108146551 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006463.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108127626 108146553 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006464.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108131648 108140391 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006465.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108131648 108146551 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006466.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108131652 108145276 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006467.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108134359 108136719 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006468.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108134437 108138161 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006469.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108140458 108146551 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006470.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108144995 108146548 + Mirg lincRNA lincRNA MGP_BALBcJ_T0006471.1 MGP_BALBcJ_G0005378.1 mouse_genomes_project 12 108145056 108146551 + Mirg lincRNA lincRNA MGP_BALBcJ_T0003366.1 MGP_BALBcJ_G0003093.1 mouse_genomes_project 12 27434555 27437020 + Gm15691 antisense antisense MGP_BALBcJ_T0034420.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14140347 14151719 - Pqlc3 protein_coding retained_intron MGP_BALBcJ_T0034421.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14140347 14151805 - MGP_BALBcJ_P0034421 Pqlc3 protein_coding protein_coding MGP_BALBcJ_T0034422.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14144649 14151712 - MGP_BALBcJ_P0034422 Pqlc3 protein_coding protein_coding MGP_BALBcJ_T0034423.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14145198 14151713 - Pqlc3 protein_coding processed_transcript MGP_BALBcJ_T0034424.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14145343 14151803 - MGP_BALBcJ_P0034424 Pqlc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034425.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14147330 14152095 - Pqlc3 protein_coding processed_transcript MGP_BALBcJ_T0034426.1 MGP_BALBcJ_G0019557.1 mouse_genomes_project 12 14147330 14152095 - Pqlc3 protein_coding processed_transcript MGP_BALBcJ_T0006421.1 MGP_BALBcJ_G0005353.1 mouse_genomes_project 12 98198637 98199464 - Gm26723 lincRNA lincRNA MGP_BALBcJ_T0009790.1 MGP_BALBcJ_G0007915.1 mouse_genomes_project 12 85323394 85323473 - Mir3068 miRNA miRNA MGP_BALBcJ_T0035459.1 MGP_BALBcJ_G0019912.1 mouse_genomes_project 12 84861535 84867373 - MGP_BALBcJ_P0035459 Zdhhc22 protein_coding protein_coding MGP_BALBcJ_T0035127.1 MGP_BALBcJ_G0019817.1 mouse_genomes_project 12 76834996 76851623 - MGP_BALBcJ_P0035127 Vti1b protein_coding protein_coding MGP_BALBcJ_T0035128.1 MGP_BALBcJ_G0019817.1 mouse_genomes_project 12 76835149 76851404 - MGP_BALBcJ_P0035128 Vti1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035129.1 MGP_BALBcJ_G0019817.1 mouse_genomes_project 12 76835308 76844112 - MGP_BALBcJ_P0035129 Vti1b protein_coding protein_coding MGP_BALBcJ_T0035130.1 MGP_BALBcJ_G0019817.1 mouse_genomes_project 12 76835496 76845339 - MGP_BALBcJ_P0035130 Vti1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100612.1 MGP_BALBcJ_G0038648.1 mouse_genomes_project 12 108053496 108053568 + Gm25357 snoRNA snoRNA MGP_BALBcJ_T0006363.1 MGP_BALBcJ_G0005306.1 mouse_genomes_project 12 5797764 5804367 - Gm4755 lincRNA lincRNA MGP_BALBcJ_T0035866.1 MGP_BALBcJ_G0020053.1 mouse_genomes_project 12 107391169 107412714 - MGP_BALBcJ_P0035866 Begain protein_coding protein_coding MGP_BALBcJ_T0035867.1 MGP_BALBcJ_G0020053.1 mouse_genomes_project 12 107393592 107396070 - Begain protein_coding retained_intron MGP_BALBcJ_T0035868.1 MGP_BALBcJ_G0020053.1 mouse_genomes_project 12 107396634 107412564 - Begain protein_coding processed_transcript MGP_BALBcJ_T0100607.1 MGP_BALBcJ_G0038643.1 mouse_genomes_project 12 108045988 108046060 + DQ267100 snoRNA snoRNA MGP_BALBcJ_T0009783.1 MGP_BALBcJ_G0007908.1 mouse_genomes_project 12 74815367 74815435 - Gm22696 miRNA miRNA MGP_BALBcJ_T0006418.1 MGP_BALBcJ_G0005350.1 mouse_genomes_project 12 97172451 97173858 + Gm28933 lincRNA lincRNA MGP_BALBcJ_T0017297.1 MGP_BALBcJ_G0015180.1 mouse_genomes_project 12 116048533 116055207 - Gm10421 processed_transcript antisense MGP_BALBcJ_T0017298.1 MGP_BALBcJ_G0015180.1 mouse_genomes_project 12 116049375 116055261 - Gm10421 processed_transcript retained_intron MGP_BALBcJ_T0017299.1 MGP_BALBcJ_G0015180.1 mouse_genomes_project 12 116055081 116055643 - Gm10421 processed_transcript antisense MGP_BALBcJ_T0009802.1 MGP_BALBcJ_G0007927.1 mouse_genomes_project 12 106999219 106999318 + Mir342 miRNA miRNA MGP_BALBcJ_T0035040.1 MGP_BALBcJ_G0019784.1 mouse_genomes_project 12 73070007 73075069 - MGP_BALBcJ_P0035040 Gphb5 protein_coding protein_coding MGP_BALBcJ_T0000267.1 MGP_BALBcJ_G0000208.1 mouse_genomes_project 12 114915213 114915646 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0009812.1 MGP_BALBcJ_G0007937.1 mouse_genomes_project 12 107982876 107982970 + Mir665 miRNA miRNA MGP_BALBcJ_T0034457.1 MGP_BALBcJ_G0019568.1 mouse_genomes_project 12 18537320 18544546 + MGP_BALBcJ_P0034457 Iah1 protein_coding protein_coding MGP_BALBcJ_T0034533.1 MGP_BALBcJ_G0019596.1 mouse_genomes_project 12 27949566 27956316 + MGP_BALBcJ_P0034533 Tmem18 protein_coding protein_coding MGP_BALBcJ_T0012831.1 MGP_BALBcJ_G0010928.1 mouse_genomes_project 12 105941368 105942209 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034456.1 MGP_BALBcJ_G0019567.1 mouse_genomes_project 12 18504336 18535708 + MGP_BALBcJ_P0034456 Cpsf3 protein_coding protein_coding MGP_BALBcJ_T0034445.1 MGP_BALBcJ_G0019563.1 mouse_genomes_project 12 14699341 14706238 + MGP_BALBcJ_P0034445 Odc1 protein_coding protein_coding MGP_BALBcJ_T0009820.1 MGP_BALBcJ_G0007945.1 mouse_genomes_project 12 107991667 107991747 - Mir3071 miRNA miRNA MGP_BALBcJ_T0000236.1 MGP_BALBcJ_G0000177.1 mouse_genomes_project 12 112177898 112178324 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0036002.1 MGP_BALBcJ_G0020094.1 mouse_genomes_project 12 111061534 111087808 + MGP_BALBcJ_P0036002 Inf2 protein_coding protein_coding MGP_BALBcJ_T0035484.1 MGP_BALBcJ_G0019923.1 mouse_genomes_project 12 85188802 85272224 - MGP_BALBcJ_P0035484 Sptlc2 protein_coding protein_coding MGP_BALBcJ_T0035485.1 MGP_BALBcJ_G0019923.1 mouse_genomes_project 12 85191814 85227373 - Sptlc2 protein_coding retained_intron MGP_BALBcJ_T0035486.1 MGP_BALBcJ_G0019923.1 mouse_genomes_project 12 85193383 85212385 - Sptlc2 protein_coding processed_transcript MGP_BALBcJ_T0035487.1 MGP_BALBcJ_G0019923.1 mouse_genomes_project 12 85229982 85233906 - Sptlc2 protein_coding retained_intron MGP_BALBcJ_T0035488.1 MGP_BALBcJ_G0019923.1 mouse_genomes_project 12 85230258 85272110 - Sptlc2 protein_coding processed_transcript MGP_BALBcJ_T0035882.1 MGP_BALBcJ_G0020057.1 mouse_genomes_project 12 108856137 108981801 + MGP_BALBcJ_P0035882 Ppp2r5c protein_coding unknown_likely_coding MGP_BALBcJ_T0035883.1 MGP_BALBcJ_G0020057.1 mouse_genomes_project 12 108894918 108993163 + MGP_BALBcJ_P0035883 Ppp2r5c protein_coding protein_coding MGP_BALBcJ_T0035884.1 MGP_BALBcJ_G0020057.1 mouse_genomes_project 12 108894918 108993163 + MGP_BALBcJ_P0035884 Ppp2r5c protein_coding protein_coding MGP_BALBcJ_T0035301.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094818 82125672 + MGP_BALBcJ_P0035301 Ptgr2 protein_coding protein_coding MGP_BALBcJ_T0035302.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094951 82113164 + Ptgr2 protein_coding retained_intron MGP_BALBcJ_T0035303.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094960 82119094 + MGP_BALBcJ_P0035303 Ptgr2 protein_coding protein_coding MGP_BALBcJ_T0035304.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094967 82107507 + Ptgr2 protein_coding retained_intron MGP_BALBcJ_T0035305.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094970 82117573 + Ptgr2 protein_coding processed_transcript MGP_BALBcJ_T0035306.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094985 82115220 + Ptgr2 protein_coding processed_transcript MGP_BALBcJ_T0035307.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094986 82123942 + MGP_BALBcJ_P0035307 Ptgr2 protein_coding protein_coding MGP_BALBcJ_T0035308.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094992 82124694 + MGP_BALBcJ_P0035308 Ptgr2 protein_coding protein_coding MGP_BALBcJ_T0035309.1 MGP_BALBcJ_G0019868.1 mouse_genomes_project 12 82094999 82123942 + MGP_BALBcJ_P0035309 Ptgr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035511.1 MGP_BALBcJ_G0019932.1 mouse_genomes_project 12 86296234 86298272 - MGP_BALBcJ_P0035511 Gm7104 protein_coding protein_coding MGP_BALBcJ_T0098474.1 MGP_BALBcJ_G0036528.1 mouse_genomes_project 12 23036814 23036920 + Gm22527 rRNA rRNA MGP_BALBcJ_T0009842.1 MGP_BALBcJ_G0007967.1 mouse_genomes_project 12 108115434 108115497 + Mir495 miRNA miRNA MGP_BALBcJ_T0012837.1 MGP_BALBcJ_G0010934.1 mouse_genomes_project 12 112897747 112898059 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035739.1 MGP_BALBcJ_G0019998.1 mouse_genomes_project 12 101682593 101689206 - MGP_BALBcJ_P0035739 Serpina1f protein_coding protein_coding MGP_BALBcJ_T0035740.1 MGP_BALBcJ_G0019998.1 mouse_genomes_project 12 101684183 101690075 - MGP_BALBcJ_P0035740 Serpina1f protein_coding protein_coding MGP_BALBcJ_T0035741.1 MGP_BALBcJ_G0019998.1 mouse_genomes_project 12 101684186 101689256 - MGP_BALBcJ_P0035741 Serpina1f protein_coding protein_coding MGP_BALBcJ_T0034237.1 MGP_BALBcJ_G0019498.1 mouse_genomes_project 12 225106 270837 + MGP_BALBcJ_P0034237 Kif3c protein_coding protein_coding MGP_BALBcJ_T0036105.1 MGP_BALBcJ_G0020130.1 mouse_genomes_project 12 118367991 118395115 + MGP_BALBcJ_P0036105 Macc1 protein_coding protein_coding MGP_BALBcJ_T0035679.1 MGP_BALBcJ_G0019978.1 mouse_genomes_project 12 100732877 100750413 - MGP_BALBcJ_P0035679 Gm20604 protein_coding protein_coding MGP_BALBcJ_T0012817.1 MGP_BALBcJ_G0010914.1 mouse_genomes_project 12 89892843 89894022 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003397.1 MGP_BALBcJ_G0003120.1 mouse_genomes_project 12 97323707 97344873 + 3300002A11Rik antisense antisense MGP_BALBcJ_T0003398.1 MGP_BALBcJ_G0003120.1 mouse_genomes_project 12 97328919 97344873 + 3300002A11Rik antisense antisense MGP_BALBcJ_T0035505.1 MGP_BALBcJ_G0019926.1 mouse_genomes_project 12 85343622 85365871 - MGP_BALBcJ_P0035505 Snw1 protein_coding protein_coding MGP_BALBcJ_T0034400.1 MGP_BALBcJ_G0019551.1 mouse_genomes_project 12 12942539 12967632 - MGP_BALBcJ_P0034400 Trib2 protein_coding protein_coding MGP_BALBcJ_T0034401.1 MGP_BALBcJ_G0019551.1 mouse_genomes_project 12 12966727 12967724 - Trib2 protein_coding processed_transcript MGP_BALBcJ_T0099336.1 MGP_BALBcJ_G0037372.1 mouse_genomes_project 12 67586661 67586764 - Gm23579 snRNA snRNA MGP_BALBcJ_T0035686.1 MGP_BALBcJ_G0019983.1 mouse_genomes_project 12 100777161 100869114 - MGP_BALBcJ_P0035686 Btbd7 protein_coding protein_coding MGP_BALBcJ_T0000249.1 MGP_BALBcJ_G0000190.1 mouse_genomes_project 12 113035631 113035922 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0035512.1 MGP_BALBcJ_G0019933.1 mouse_genomes_project 12 86372223 86375569 + MGP_BALBcJ_P0035512 protein_coding protein_coding MGP_BALBcJ_T0035442.1 MGP_BALBcJ_G0019909.1 mouse_genomes_project 12 84570913 84597251 - MGP_BALBcJ_P0035442 Angel1 protein_coding protein_coding MGP_BALBcJ_T0035443.1 MGP_BALBcJ_G0019909.1 mouse_genomes_project 12 84572606 84576581 - Angel1 protein_coding processed_transcript MGP_BALBcJ_T0035444.1 MGP_BALBcJ_G0019909.1 mouse_genomes_project 12 84572724 84587434 - Angel1 protein_coding processed_transcript MGP_BALBcJ_T0035445.1 MGP_BALBcJ_G0019909.1 mouse_genomes_project 12 84572766 84576376 - Angel1 protein_coding processed_transcript MGP_BALBcJ_T0035446.1 MGP_BALBcJ_G0019909.1 mouse_genomes_project 12 84572850 84588978 - Angel1 protein_coding processed_transcript MGP_BALBcJ_T0035447.1 MGP_BALBcJ_G0019909.1 mouse_genomes_project 12 84589137 84592731 - Angel1 protein_coding processed_transcript MGP_BALBcJ_T0009757.1 MGP_BALBcJ_G0007882.1 mouse_genomes_project 12 12154457 12154567 - Gm27682 miRNA miRNA MGP_BALBcJ_T0009775.1 MGP_BALBcJ_G0007900.1 mouse_genomes_project 12 66941317 66941397 - miRNA miRNA MGP_BALBcJ_T0035802.1 MGP_BALBcJ_G0020035.1 mouse_genomes_project 12 103989113 104066962 + MGP_BALBcJ_P0035802 Ak7 protein_coding protein_coding MGP_BALBcJ_T0034288.1 MGP_BALBcJ_G0019502.1 mouse_genomes_project 12 837936 838333 + MGP_BALBcJ_P0034288 Gm17728 protein_coding protein_coding MGP_BALBcJ_T0006417.1 MGP_BALBcJ_G0005349.1 mouse_genomes_project 12 88725369 88933584 - 4930544I03Rik lincRNA lincRNA MGP_BALBcJ_T0012827.1 MGP_BALBcJ_G0010924.1 mouse_genomes_project 12 104823341 104825013 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034661.1 MGP_BALBcJ_G0019643.1 mouse_genomes_project 12 37364957 37396759 - MGP_BALBcJ_P0034661 Arl4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034662.1 MGP_BALBcJ_G0019643.1 mouse_genomes_project 12 37364957 37396768 - MGP_BALBcJ_P0034662 Arl4a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034663.1 MGP_BALBcJ_G0019643.1 mouse_genomes_project 12 37369037 37373891 - Arl4a protein_coding processed_transcript MGP_BALBcJ_T0034664.1 MGP_BALBcJ_G0019643.1 mouse_genomes_project 12 37392682 37396821 - MGP_BALBcJ_P0034664 Arl4a protein_coding protein_coding MGP_BALBcJ_T0034665.1 MGP_BALBcJ_G0019643.1 mouse_genomes_project 12 37395213 37397417 - MGP_BALBcJ_P0034665 Arl4a protein_coding protein_coding MGP_BALBcJ_T0034494.1 MGP_BALBcJ_G0019580.1 mouse_genomes_project 12 23644006 23753358 - MGP_BALBcJ_P0034494 Rnf144a protein_coding protein_coding MGP_BALBcJ_T0034495.1 MGP_BALBcJ_G0019580.1 mouse_genomes_project 12 23644006 23753358 - MGP_BALBcJ_P0034495 Rnf144a protein_coding protein_coding MGP_BALBcJ_T0100592.1 MGP_BALBcJ_G0038628.1 mouse_genomes_project 12 80547821 80547958 - Gm22149 snoRNA snoRNA MGP_BALBcJ_T0012796.1 MGP_BALBcJ_G0010893.1 mouse_genomes_project 12 58966635 58967163 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035579.1 MGP_BALBcJ_G0019949.1 mouse_genomes_project 12 96715751 96757249 + MGP_BALBcJ_P0035579 Zc3h14 protein_coding protein_coding MGP_BALBcJ_T0035580.1 MGP_BALBcJ_G0019949.1 mouse_genomes_project 12 96715751 96757249 + MGP_BALBcJ_P0035580 Zc3h14 protein_coding protein_coding MGP_BALBcJ_T0035581.1 MGP_BALBcJ_G0019949.1 mouse_genomes_project 12 96715751 96757249 + MGP_BALBcJ_P0035581 Zc3h14 protein_coding protein_coding MGP_BALBcJ_T0035582.1 MGP_BALBcJ_G0019949.1 mouse_genomes_project 12 96739792 96757249 + MGP_BALBcJ_P0035582 Zc3h14 protein_coding protein_coding MGP_BALBcJ_T0012836.1 MGP_BALBcJ_G0010933.1 mouse_genomes_project 12 112369141 112369576 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000089.1 MGP_BALBcJ_G0000067.1 mouse_genomes_project 12 113016600 113017075 - MGP_BALBcJ_P0000089 Ighv3-8 IG_V_gene IG_V_gene MGP_BALBcJ_T0000035.1 MGP_BALBcJ_G0000028.1 mouse_genomes_project 12 111925998 111926052 - MGP_BALBcJ_P0000035 Ighj4 IG_J_gene IG_J_gene MGP_BALBcJ_T0009762.1 MGP_BALBcJ_G0007887.1 mouse_genomes_project 12 27818011 27818115 - Gm25865 miRNA miRNA MGP_BALBcJ_T0035405.1 MGP_BALBcJ_G0019900.1 mouse_genomes_project 12 83533778 83557285 + MGP_BALBcJ_P0035405 Batf protein_coding protein_coding MGP_BALBcJ_T0000858.1 MGP_BALBcJ_G0000790.1 mouse_genomes_project 12 82937647 82939217 - TEC TEC MGP_BALBcJ_T0034748.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52229989 52329436 - MGP_BALBcJ_P0034748 Baz1a protein_coding protein_coding MGP_BALBcJ_T0034749.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52230551 52329607 - MGP_BALBcJ_P0034749 Baz1a protein_coding protein_coding MGP_BALBcJ_T0034750.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52231169 52232937 - Baz1a protein_coding retained_intron MGP_BALBcJ_T0034751.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52260948 52268217 - MGP_BALBcJ_P0034751 Baz1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034752.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52278219 52283331 - MGP_BALBcJ_P0034752 Baz1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034753.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52293822 52360193 - MGP_BALBcJ_P0034753 Baz1a protein_coding protein_coding MGP_BALBcJ_T0034754.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52314129 52326106 - MGP_BALBcJ_P0034754 Baz1a protein_coding protein_coding MGP_BALBcJ_T0034755.1 MGP_BALBcJ_G0019680.1 mouse_genomes_project 12 52314144 52342287 - MGP_BALBcJ_P0034755 Baz1a protein_coding protein_coding MGP_BALBcJ_T0000053.1 MGP_BALBcJ_G0000042.1 mouse_genomes_project 12 113431499 113431793 + MGP_BALBcJ_P0000053 Ighv1-13 IG_LV_gene IG_LV_gene MGP_BALBcJ_T0035638.1 MGP_BALBcJ_G0019964.1 mouse_genomes_project 12 99029109 99076474 - MGP_BALBcJ_P0035638 Smek1 protein_coding protein_coding MGP_BALBcJ_T0035639.1 MGP_BALBcJ_G0019964.1 mouse_genomes_project 12 99029109 99076474 - MGP_BALBcJ_P0035639 Smek1 protein_coding protein_coding MGP_BALBcJ_T0034542.1 MGP_BALBcJ_G0019601.1 mouse_genomes_project 12 28524918 28525473 + MGP_BALBcJ_P0034542 6030469F06Rik protein_coding protein_coding MGP_BALBcJ_T0035776.1 MGP_BALBcJ_G0020019.1 mouse_genomes_project 12 102862597 102913660 - MGP_BALBcJ_P0035776 Dicer1 protein_coding unknown_likely_coding MGP_BALBcJ_T0011316.1 MGP_BALBcJ_G0009441.1 mouse_genomes_project 12 107926266 107926471 + Gm27528 misc_RNA misc_RNA MGP_BALBcJ_T0012803.1 MGP_BALBcJ_G0010900.1 mouse_genomes_project 12 72002294 72004302 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100557.1 MGP_BALBcJ_G0038593.1 mouse_genomes_project 12 14091714 14091836 + Gm22303 snoRNA snoRNA MGP_BALBcJ_T0100608.1 MGP_BALBcJ_G0038644.1 mouse_genomes_project 12 108047795 108047868 + DQ267101 snoRNA snoRNA MGP_BALBcJ_T0035835.1 MGP_BALBcJ_G0020042.1 mouse_genomes_project 12 106539642 106610079 - MGP_BALBcJ_P0035835 Ccdc85c protein_coding protein_coding MGP_BALBcJ_T0100616.1 MGP_BALBcJ_G0038652.1 mouse_genomes_project 12 108077186 108077261 + Gm23736 snoRNA snoRNA MGP_BALBcJ_T0100614.1 MGP_BALBcJ_G0038650.1 mouse_genomes_project 12 108070284 108070366 + Gm23347 snoRNA snoRNA MGP_BALBcJ_T0000078.1 MGP_BALBcJ_G0000061.1 mouse_genomes_project 12 112914513 112914947 - MGP_BALBcJ_P0000078 Ighv3-3 IG_V_gene IG_V_gene MGP_BALBcJ_T0000079.1 MGP_BALBcJ_G0000061.1 mouse_genomes_project 12 112914513 112914809 - MGP_BALBcJ_P0000079 Ighv3-3 IG_V_gene IG_V_gene MGP_BALBcJ_T0099333.1 MGP_BALBcJ_G0037369.1 mouse_genomes_project 12 65206930 65207116 + Gm26256 snRNA snRNA MGP_BALBcJ_T0034291.1 MGP_BALBcJ_G0019505.1 mouse_genomes_project 12 989159 1017394 + MGP_BALBcJ_P0034291 Dnajc27 protein_coding protein_coding MGP_BALBcJ_T0034292.1 MGP_BALBcJ_G0019505.1 mouse_genomes_project 12 989214 1015986 + MGP_BALBcJ_P0034292 Dnajc27 protein_coding protein_coding MGP_BALBcJ_T0012819.1 MGP_BALBcJ_G0010916.1 mouse_genomes_project 12 98849108 98849579 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034996.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70511531 70550414 - MGP_BALBcJ_P0034996 4930447C04Rik protein_coding protein_coding MGP_BALBcJ_T0034997.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70511531 70550560 - MGP_BALBcJ_P0034997 4930447C04Rik protein_coding protein_coding MGP_BALBcJ_T0034998.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70524096 70537775 - MGP_BALBcJ_P0034998 4930447C04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034999.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70524150 70537971 - 4930447C04Rik protein_coding retained_intron MGP_BALBcJ_T0035000.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70524204 70537769 - 4930447C04Rik protein_coding processed_transcript MGP_BALBcJ_T0035001.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70537731 70550511 - MGP_BALBcJ_P0035001 4930447C04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035002.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70544291 70574056 - MGP_BALBcJ_P0035002 4930447C04Rik protein_coding protein_coding MGP_BALBcJ_T0035003.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70545819 70571322 - MGP_BALBcJ_P0035003 4930447C04Rik protein_coding protein_coding MGP_BALBcJ_T0035004.1 MGP_BALBcJ_G0019768.1 mouse_genomes_project 12 70545823 70573365 - MGP_BALBcJ_P0035004 4930447C04Rik protein_coding protein_coding MGP_BALBcJ_T0035957.1 MGP_BALBcJ_G0020081.1 mouse_genomes_project 12 110159815 110181777 + MGP_BALBcJ_P0035957 Apopt1 protein_coding protein_coding MGP_BALBcJ_T0035958.1 MGP_BALBcJ_G0020081.1 mouse_genomes_project 12 110159834 110202645 + MGP_BALBcJ_P0035958 Apopt1 protein_coding protein_coding MGP_BALBcJ_T0035959.1 MGP_BALBcJ_G0020081.1 mouse_genomes_project 12 110159834 110199028 + MGP_BALBcJ_P0035959 Apopt1 protein_coding protein_coding MGP_BALBcJ_T0035960.1 MGP_BALBcJ_G0020081.1 mouse_genomes_project 12 110159838 110170490 + MGP_BALBcJ_P0035960 Apopt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035961.1 MGP_BALBcJ_G0020081.1 mouse_genomes_project 12 110159840 110174822 + MGP_BALBcJ_P0035961 Apopt1 protein_coding protein_coding MGP_BALBcJ_T0100604.1 MGP_BALBcJ_G0038640.1 mouse_genomes_project 12 108037283 108037356 + Gm24899 snoRNA snoRNA MGP_BALBcJ_T0012839.1 MGP_BALBcJ_G0010936.1 mouse_genomes_project 12 114523143 114526210 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034517.1 MGP_BALBcJ_G0019593.1 mouse_genomes_project 12 27311344 27392136 + MGP_BALBcJ_P0034517 Pxdn protein_coding protein_coding MGP_BALBcJ_T0034518.1 MGP_BALBcJ_G0019593.1 mouse_genomes_project 12 27311358 27363339 + Pxdn protein_coding retained_intron MGP_BALBcJ_T0034519.1 MGP_BALBcJ_G0019593.1 mouse_genomes_project 12 27311358 27362787 + MGP_BALBcJ_P0034519 Pxdn protein_coding protein_coding MGP_BALBcJ_T0034520.1 MGP_BALBcJ_G0019593.1 mouse_genomes_project 12 27370224 27376132 + Pxdn protein_coding processed_transcript MGP_BALBcJ_T0034521.1 MGP_BALBcJ_G0019593.1 mouse_genomes_project 12 27370230 27373571 + Pxdn protein_coding retained_intron MGP_BALBcJ_T0034522.1 MGP_BALBcJ_G0019593.1 mouse_genomes_project 12 27373599 27376274 + Pxdn protein_coding retained_intron MGP_BALBcJ_T0034633.1 MGP_BALBcJ_G0019634.1 mouse_genomes_project 12 33500542 33541905 + MGP_BALBcJ_P0034633 Ankmy2 protein_coding protein_coding MGP_BALBcJ_T0034467.1 MGP_BALBcJ_G0019570.1 mouse_genomes_project 12 18612386 18643291 - MGP_BALBcJ_P0034467 Ywhaq protein_coding protein_coding MGP_BALBcJ_T0034468.1 MGP_BALBcJ_G0019570.1 mouse_genomes_project 12 18620259 18622726 - Ywhaq protein_coding retained_intron MGP_BALBcJ_T0003403.1 MGP_BALBcJ_G0003124.1 mouse_genomes_project 12 101333622 101344745 + Gm15523 antisense antisense MGP_BALBcJ_T0011319.1 MGP_BALBcJ_G0009444.1 mouse_genomes_project 12 108000189 108000287 + Gm27350 misc_RNA misc_RNA MGP_BALBcJ_T0034761.1 MGP_BALBcJ_G0019684.1 mouse_genomes_project 12 52479462 52708159 + MGP_BALBcJ_P0034761 protein_coding protein_coding MGP_BALBcJ_T0012841.1 MGP_BALBcJ_G0010938.1 mouse_genomes_project 12 114916772 114917691 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035090.1 MGP_BALBcJ_G0019802.1 mouse_genomes_project 12 74460940 74464158 - MGP_BALBcJ_P0035090 protein_coding protein_coding MGP_BALBcJ_T0017261.1 MGP_BALBcJ_G0015166.1 mouse_genomes_project 12 42753360 42757878 + Gm9921 processed_transcript processed_transcript MGP_BALBcJ_T0099352.1 MGP_BALBcJ_G0037388.1 mouse_genomes_project 12 115418849 115418953 - Gm25112 snRNA snRNA MGP_BALBcJ_T0000239.1 MGP_BALBcJ_G0000180.1 mouse_genomes_project 12 112414199 112414619 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0006408.1 MGP_BALBcJ_G0005340.1 mouse_genomes_project 12 81428516 81429481 + Gm26623 lincRNA lincRNA MGP_BALBcJ_T0034706.1 MGP_BALBcJ_G0019658.1 mouse_genomes_project 12 46660377 46662083 + Foxg1 protein_coding processed_transcript MGP_BALBcJ_T0034707.1 MGP_BALBcJ_G0019658.1 mouse_genomes_project 12 46660517 46661318 + Foxg1 protein_coding processed_transcript MGP_BALBcJ_T0034708.1 MGP_BALBcJ_G0019658.1 mouse_genomes_project 12 46660600 46664574 + MGP_BALBcJ_P0034708 Foxg1 protein_coding protein_coding MGP_BALBcJ_T0034709.1 MGP_BALBcJ_G0019658.1 mouse_genomes_project 12 46660724 46664580 + MGP_BALBcJ_P0034709 Foxg1 protein_coding protein_coding MGP_BALBcJ_T0034320.1 MGP_BALBcJ_G0019518.1 mouse_genomes_project 12 1760372 1770369 + MGP_BALBcJ_P0034320 BC068281 protein_coding protein_coding MGP_BALBcJ_T0034321.1 MGP_BALBcJ_G0019518.1 mouse_genomes_project 12 1767601 1774264 + MGP_BALBcJ_P0034321 BC068281 protein_coding protein_coding MGP_BALBcJ_T0035733.1 MGP_BALBcJ_G0019995.1 mouse_genomes_project 12 101614682 101626465 - MGP_BALBcJ_P0035733 Serpina10 protein_coding protein_coding MGP_BALBcJ_T0035734.1 MGP_BALBcJ_G0019995.1 mouse_genomes_project 12 101617019 101626442 - MGP_BALBcJ_P0035734 Serpina10 protein_coding protein_coding MGP_BALBcJ_T0003389.1 MGP_BALBcJ_G0003112.1 mouse_genomes_project 12 79283419 79285261 + Gm16572 antisense antisense MGP_BALBcJ_T0000034.1 MGP_BALBcJ_G0000027.1 mouse_genomes_project 12 112047661 112047671 - IG_D_pseudogene IG_D_pseudogene MGP_BALBcJ_T0009804.1 MGP_BALBcJ_G0007929.1 mouse_genomes_project 12 107198178 107198274 + Mir345 miRNA miRNA MGP_BALBcJ_T0035134.1 MGP_BALBcJ_G0019819.1 mouse_genomes_project 12 76887558 76902553 + MGP_BALBcJ_P0035134 Rdh12 protein_coding protein_coding MGP_BALBcJ_T0035135.1 MGP_BALBcJ_G0019819.1 mouse_genomes_project 12 76887575 76902552 + MGP_BALBcJ_P0035135 Rdh12 protein_coding protein_coding MGP_BALBcJ_T0035136.1 MGP_BALBcJ_G0019819.1 mouse_genomes_project 12 76887591 76902552 + Rdh12 protein_coding retained_intron MGP_BALBcJ_T0035137.1 MGP_BALBcJ_G0019819.1 mouse_genomes_project 12 76888041 76901953 + MGP_BALBcJ_P0035137 Rdh12 protein_coding unknown_likely_coding MGP_BALBcJ_T0035138.1 MGP_BALBcJ_G0019819.1 mouse_genomes_project 12 76889305 76891400 + MGP_BALBcJ_P0035138 Rdh12 protein_coding protein_coding MGP_BALBcJ_T0035996.1 MGP_BALBcJ_G0020089.1 mouse_genomes_project 12 110557509 110578400 + MGP_BALBcJ_P0035996 Aspg protein_coding protein_coding MGP_BALBcJ_T0034737.1 MGP_BALBcJ_G0019673.1 mouse_genomes_project 12 49993146 50447646 + MGP_BALBcJ_P0034737 Akap6 protein_coding protein_coding MGP_BALBcJ_T0000004.1 MGP_BALBcJ_G0000003.1 mouse_genomes_project 12 111746043 111751436 - MGP_BALBcJ_P0000004 Igha IG_C_gene IG_C_gene MGP_BALBcJ_T0000005.1 MGP_BALBcJ_G0000003.1 mouse_genomes_project 12 111749901 111751436 - MGP_BALBcJ_P0000005 Igha IG_C_gene IG_C_gene MGP_BALBcJ_T0035997.1 MGP_BALBcJ_G0020090.1 mouse_genomes_project 12 110597036 110632555 + MGP_BALBcJ_P0035997 Kif26a protein_coding protein_coding MGP_BALBcJ_T0035998.1 MGP_BALBcJ_G0020090.1 mouse_genomes_project 12 110629962 110631342 + Kif26a protein_coding processed_transcript MGP_BALBcJ_T0035757.1 MGP_BALBcJ_G0020006.1 mouse_genomes_project 12 102156408 102167060 + MGP_BALBcJ_P0035757 Serpina5 protein_coding protein_coding MGP_BALBcJ_T0034930.1 MGP_BALBcJ_G0019746.1 mouse_genomes_project 12 67782150 67816984 - MGP_BALBcJ_P0034930 Pygl protein_coding protein_coding MGP_BALBcJ_T0034931.1 MGP_BALBcJ_G0019746.1 mouse_genomes_project 12 67788785 67789228 - Pygl protein_coding processed_transcript MGP_BALBcJ_T0034932.1 MGP_BALBcJ_G0019746.1 mouse_genomes_project 12 67801919 67817013 - Pygl protein_coding retained_intron MGP_BALBcJ_T0034933.1 MGP_BALBcJ_G0019746.1 mouse_genomes_project 12 67805799 67816746 - Pygl protein_coding processed_transcript MGP_BALBcJ_T0000082.1 MGP_BALBcJ_G0000063.1 mouse_genomes_project 12 112951673 112952108 - MGP_BALBcJ_P0000082 Ighv3-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0098471.1 MGP_BALBcJ_G0036525.1 mouse_genomes_project 12 2788277 2788392 + Gm23752 rRNA rRNA MGP_BALBcJ_T0000095.1 MGP_BALBcJ_G0000072.1 mouse_genomes_project 12 113165039 113165497 - MGP_BALBcJ_P0000095 Ighv6-7 IG_V_gene IG_V_gene MGP_BALBcJ_T0034813.1 MGP_BALBcJ_G0019705.1 mouse_genomes_project 12 56475852 56491091 + MGP_BALBcJ_P0034813 Gemin2 protein_coding protein_coding MGP_BALBcJ_T0034814.1 MGP_BALBcJ_G0019705.1 mouse_genomes_project 12 56475913 56491020 + Gemin2 protein_coding retained_intron MGP_BALBcJ_T0034815.1 MGP_BALBcJ_G0019705.1 mouse_genomes_project 12 56487290 56490508 + Gemin2 protein_coding retained_intron MGP_BALBcJ_T0100569.1 MGP_BALBcJ_G0038605.1 mouse_genomes_project 12 36979513 36979645 + Gm24434 snoRNA snoRNA MGP_BALBcJ_T0000029.1 MGP_BALBcJ_G0000022.1 mouse_genomes_project 12 112046195 112046212 - MGP_BALBcJ_P0000029 IG_D_gene IG_D_gene MGP_BALBcJ_T0099310.1 MGP_BALBcJ_G0037346.1 mouse_genomes_project 12 10611372 10611479 - Gm24142 snRNA snRNA MGP_BALBcJ_T0035334.1 MGP_BALBcJ_G0019873.1 mouse_genomes_project 12 82226059 82250807 + MGP_BALBcJ_P0035334 Bbof1 protein_coding protein_coding MGP_BALBcJ_T0035335.1 MGP_BALBcJ_G0019873.1 mouse_genomes_project 12 82230228 82245448 + MGP_BALBcJ_P0035335 Bbof1 protein_coding protein_coding MGP_BALBcJ_T0035337.1 MGP_BALBcJ_G0019873.1 mouse_genomes_project 12 82237051 82247407 + MGP_BALBcJ_P0035337 Bbof1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099312.1 MGP_BALBcJ_G0037348.1 mouse_genomes_project 12 12006784 12006888 + Gm26449 snRNA snRNA MGP_BALBcJ_T0009826.1 MGP_BALBcJ_G0007951.1 mouse_genomes_project 12 108078583 108078660 + Mir882 miRNA miRNA MGP_BALBcJ_T0009809.1 MGP_BALBcJ_G0007934.1 mouse_genomes_project 12 107982351 107982448 + Mir337 miRNA miRNA MGP_BALBcJ_T0009764.1 MGP_BALBcJ_G0007889.1 mouse_genomes_project 12 30407703 30407860 + Gm22904 miRNA miRNA MGP_BALBcJ_T0034504.1 MGP_BALBcJ_G0019585.1 mouse_genomes_project 12 25924322 25947028 - MGP_BALBcJ_P0034504 Allc protein_coding unknown_likely_coding MGP_BALBcJ_T0034626.1 MGP_BALBcJ_G0019630.1 mouse_genomes_project 12 33336476 33341586 + Agr2 protein_coding retained_intron MGP_BALBcJ_T0034627.1 MGP_BALBcJ_G0019630.1 mouse_genomes_project 12 33336476 33347560 + MGP_BALBcJ_P0034627 Agr2 protein_coding protein_coding MGP_BALBcJ_T0098318.1 MGP_BALBcJ_G0036372.1 mouse_genomes_project 12 82234271 82235655 + pseudogene pseudogene MGP_BALBcJ_T0035243.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81433410 81477067 + MGP_BALBcJ_P0035243 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035244.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81433410 81448408 + MGP_BALBcJ_P0035244 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035245.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81434309 81485772 + MGP_BALBcJ_P0035245 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035246.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81434310 81454036 + MGP_BALBcJ_P0035246 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035247.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81434314 81448406 + MGP_BALBcJ_P0035247 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035248.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81434348 81462114 + MGP_BALBcJ_P0035248 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035249.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81434363 81444874 + MGP_BALBcJ_P0035249 Rbm25 protein_coding protein_coding MGP_BALBcJ_T0035250.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81434383 81466649 + MGP_BALBcJ_P0035250 Rbm25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035251.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81436712 81441566 + Rbm25 protein_coding retained_intron MGP_BALBcJ_T0035252.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81444729 81454055 + Rbm25 protein_coding retained_intron MGP_BALBcJ_T0035253.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81444814 81484669 + MGP_BALBcJ_P0035253 Rbm25 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035254.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81444874 81471133 + Rbm25 protein_coding retained_intron MGP_BALBcJ_T0035255.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81448357 81454415 + Rbm25 protein_coding processed_transcript MGP_BALBcJ_T0035256.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81450966 81454772 + Rbm25 protein_coding retained_intron MGP_BALBcJ_T0035257.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81461174 81462234 + Rbm25 protein_coding retained_intron MGP_BALBcJ_T0035258.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81465625 81466649 + Rbm25 protein_coding processed_transcript MGP_BALBcJ_T0035259.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81477174 81478761 + Rbm25 protein_coding processed_transcript MGP_BALBcJ_T0035260.1 MGP_BALBcJ_G0019852.1 mouse_genomes_project 12 81477502 81480548 + Rbm25 protein_coding retained_intron MGP_BALBcJ_T0034696.1 MGP_BALBcJ_G0019654.1 mouse_genomes_project 12 41669874 41934175 + MGP_BALBcJ_P0034696 Nrcam protein_coding protein_coding MGP_BALBcJ_T0034697.1 MGP_BALBcJ_G0019654.1 mouse_genomes_project 12 41669874 41934175 + MGP_BALBcJ_P0034697 Nrcam protein_coding protein_coding MGP_BALBcJ_T0034698.1 MGP_BALBcJ_G0019654.1 mouse_genomes_project 12 41864538 41932530 + MGP_BALBcJ_P0034698 Nrcam protein_coding unknown_likely_coding MGP_BALBcJ_T0000075.1 MGP_BALBcJ_G0000059.1 mouse_genomes_project 12 112763446 112763831 - MGP_BALBcJ_P0000075 IG_V_gene IG_V_gene MGP_BALBcJ_T0000115.1 MGP_BALBcJ_G0000087.1 mouse_genomes_project 12 114915213 114915665 - MGP_BALBcJ_P0000115 IG_V_gene IG_V_gene MGP_BALBcJ_T0034888.1 MGP_BALBcJ_G0019731.1 mouse_genomes_project 12 66876773 66881435 + Klhdc2 protein_coding retained_intron MGP_BALBcJ_T0034889.1 MGP_BALBcJ_G0019731.1 mouse_genomes_project 12 66876814 66890977 + MGP_BALBcJ_P0034889 Klhdc2 protein_coding protein_coding MGP_BALBcJ_T0034890.1 MGP_BALBcJ_G0019731.1 mouse_genomes_project 12 66876847 66888811 + Klhdc2 protein_coding retained_intron MGP_BALBcJ_T0034891.1 MGP_BALBcJ_G0019731.1 mouse_genomes_project 12 66882713 66888839 + Klhdc2 protein_coding retained_intron MGP_BALBcJ_T0100611.1 MGP_BALBcJ_G0038647.1 mouse_genomes_project 12 108052716 108052788 + DQ267102 snoRNA snoRNA MGP_BALBcJ_T0017254.1 MGP_BALBcJ_G0015164.1 mouse_genomes_project 12 30461454 30500337 - F730043M19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017255.1 MGP_BALBcJ_G0015164.1 mouse_genomes_project 12 30475995 30499660 - F730043M19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017256.1 MGP_BALBcJ_G0015164.1 mouse_genomes_project 12 30485987 30500337 - F730043M19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017257.1 MGP_BALBcJ_G0015164.1 mouse_genomes_project 12 30487624 30500348 - F730043M19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017258.1 MGP_BALBcJ_G0015164.1 mouse_genomes_project 12 30488358 30492577 - F730043M19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017259.1 MGP_BALBcJ_G0015164.1 mouse_genomes_project 12 30499895 30500347 - F730043M19Rik processed_transcript processed_transcript MGP_BALBcJ_T0035657.1 MGP_BALBcJ_G0019970.1 mouse_genomes_project 12 99948689 99980529 + MGP_BALBcJ_P0035657 Cpsf2 protein_coding protein_coding MGP_BALBcJ_T0034564.1 MGP_BALBcJ_G0019607.1 mouse_genomes_project 12 28940003 28979791 - MGP_BALBcJ_P0034564 Bcap29 protein_coding protein_coding MGP_BALBcJ_T0034565.1 MGP_BALBcJ_G0019607.1 mouse_genomes_project 12 28940003 28979730 - MGP_BALBcJ_P0034565 Bcap29 protein_coding protein_coding MGP_BALBcJ_T0035673.1 MGP_BALBcJ_G0019975.1 mouse_genomes_project 12 100543440 100553501 + MGP_BALBcJ_P0035673 Chga protein_coding protein_coding MGP_BALBcJ_T0100570.1 MGP_BALBcJ_G0038606.1 mouse_genomes_project 12 38718386 38718518 - Gm25497 snoRNA snoRNA MGP_BALBcJ_T0000072.1 MGP_BALBcJ_G0000056.1 mouse_genomes_project 12 112645152 112645582 - MGP_BALBcJ_P0000072 Ighv14-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0034994.1 MGP_BALBcJ_G0019766.1 mouse_genomes_project 12 70273898 70288554 - MGP_BALBcJ_P0034994 Dhrs7 protein_coding protein_coding MGP_BALBcJ_T0035357.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82747202 82799522 - MGP_BALBcJ_P0035357 Arel1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035358.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82747204 82799598 - MGP_BALBcJ_P0035358 Arel1 protein_coding protein_coding MGP_BALBcJ_T0035359.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82763927 82772086 - MGP_BALBcJ_P0035359 Arel1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035360.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82769300 82775631 - MGP_BALBcJ_P0035360 Arel1 protein_coding protein_coding MGP_BALBcJ_T0035361.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82770900 82774106 - MGP_BALBcJ_P0035361 Arel1 protein_coding protein_coding MGP_BALBcJ_T0035362.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82770921 82799554 - MGP_BALBcJ_P0035362 Arel1 protein_coding protein_coding MGP_BALBcJ_T0035363.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82770930 82799536 - MGP_BALBcJ_P0035363 Arel1 protein_coding protein_coding MGP_BALBcJ_T0035364.1 MGP_BALBcJ_G0019885.1 mouse_genomes_project 12 82779789 82794728 - Arel1 protein_coding processed_transcript MGP_BALBcJ_T0000080.1 MGP_BALBcJ_G0000062.1 mouse_genomes_project 12 112937825 112938366 - MGP_BALBcJ_P0000080 Ighv7-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0000081.1 MGP_BALBcJ_G0000062.1 mouse_genomes_project 12 112937825 112938292 - MGP_BALBcJ_P0000081 Ighv7-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0034427.1 MGP_BALBcJ_G0019558.1 mouse_genomes_project 12 14154887 14163422 - MGP_BALBcJ_P0034427 2410004P03Rik protein_coding protein_coding MGP_BALBcJ_T0034428.1 MGP_BALBcJ_G0019558.1 mouse_genomes_project 12 14157156 14163249 - MGP_BALBcJ_P0034428 2410004P03Rik protein_coding protein_coding MGP_BALBcJ_T0034429.1 MGP_BALBcJ_G0019558.1 mouse_genomes_project 12 14158705 14163198 - MGP_BALBcJ_P0034429 2410004P03Rik protein_coding protein_coding MGP_BALBcJ_T0035530.1 MGP_BALBcJ_G0019937.1 mouse_genomes_project 12 88696583 88710468 - MGP_BALBcJ_P0035530 Dio2 protein_coding protein_coding MGP_BALBcJ_T0009801.1 MGP_BALBcJ_G0007926.1 mouse_genomes_project 12 104151665 104151735 - Gm22120 miRNA miRNA MGP_BALBcJ_T0035206.1 MGP_BALBcJ_G0019844.1 mouse_genomes_project 12 79421035 79499671 - MGP_BALBcJ_P0035206 Map3k9 protein_coding protein_coding MGP_BALBcJ_T0035207.1 MGP_BALBcJ_G0019844.1 mouse_genomes_project 12 79430265 79499375 - MGP_BALBcJ_P0035207 Map3k9 protein_coding unknown_likely_coding MGP_BALBcJ_T0009766.1 MGP_BALBcJ_G0007891.1 mouse_genomes_project 12 34173191 34173265 + Mir5099 miRNA miRNA MGP_BALBcJ_T0035970.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110250849 110259875 - MGP_BALBcJ_P0035970 Xrcc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035971.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110250850 110261543 - MGP_BALBcJ_P0035971 Xrcc3 protein_coding protein_coding MGP_BALBcJ_T0035972.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110252586 110259875 - Xrcc3 protein_coding processed_transcript MGP_BALBcJ_T0035973.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110252652 110257656 - Xrcc3 protein_coding retained_intron MGP_BALBcJ_T0035974.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110252747 110261575 - Xrcc3 protein_coding processed_transcript MGP_BALBcJ_T0035976.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110257439 110259895 - Xrcc3 protein_coding processed_transcript MGP_BALBcJ_T0035977.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110257574 110261554 - Xrcc3 protein_coding processed_transcript MGP_BALBcJ_T0035978.1 MGP_BALBcJ_G0020083.1 mouse_genomes_project 12 110259177 110259895 - Xrcc3 protein_coding processed_transcript MGP_BALBcJ_T0034363.1 MGP_BALBcJ_G0019530.1 mouse_genomes_project 12 5804508 5827773 + MGP_BALBcJ_P0034363 Sdc1 protein_coding protein_coding MGP_BALBcJ_T0034364.1 MGP_BALBcJ_G0019530.1 mouse_genomes_project 12 5804509 5823072 + Sdc1 protein_coding retained_intron MGP_BALBcJ_T0034365.1 MGP_BALBcJ_G0019530.1 mouse_genomes_project 12 5804598 5827120 + MGP_BALBcJ_P0034365 Sdc1 protein_coding protein_coding MGP_BALBcJ_T0034366.1 MGP_BALBcJ_G0019530.1 mouse_genomes_project 12 5804988 5823637 + Sdc1 protein_coding processed_transcript MGP_BALBcJ_T0035346.1 MGP_BALBcJ_G0019880.1 mouse_genomes_project 12 82505774 82527338 - MGP_BALBcJ_P0035346 Syndig1l protein_coding protein_coding MGP_BALBcJ_T0035083.1 MGP_BALBcJ_G0019799.1 mouse_genomes_project 12 74260843 74392849 - MGP_BALBcJ_P0035083 Sptb protein_coding protein_coding MGP_BALBcJ_T0035084.1 MGP_BALBcJ_G0019799.1 mouse_genomes_project 12 74263586 74264442 - Sptb protein_coding retained_intron MGP_BALBcJ_T0035085.1 MGP_BALBcJ_G0019799.1 mouse_genomes_project 12 74276473 74392325 - MGP_BALBcJ_P0035085 Sptb protein_coding protein_coding MGP_BALBcJ_T0098831.1 MGP_BALBcJ_G0036882.1 mouse_genomes_project 12 54035580 54039518 + C87198 sense_intronic sense_intronic MGP_BALBcJ_T0098832.1 MGP_BALBcJ_G0036882.1 mouse_genomes_project 12 54035590 54039054 + C87198 sense_intronic sense_intronic MGP_BALBcJ_T0035851.1 MGP_BALBcJ_G0020048.1 mouse_genomes_project 12 107154310 107177856 + MGP_BALBcJ_P0035851 Yy1 protein_coding protein_coding MGP_BALBcJ_T0035852.1 MGP_BALBcJ_G0020048.1 mouse_genomes_project 12 107167462 107176788 + Yy1 protein_coding retained_intron MGP_BALBcJ_T0035779.1 MGP_BALBcJ_G0020021.1 mouse_genomes_project 12 103041720 103047752 + MGP_BALBcJ_P0035779 4930408O17Rik protein_coding protein_coding MGP_BALBcJ_T0035980.1 MGP_BALBcJ_G0020085.1 mouse_genomes_project 12 110276762 110357358 - MGP_BALBcJ_P0035980 Ppp1r13b protein_coding protein_coding MGP_BALBcJ_T0035981.1 MGP_BALBcJ_G0020085.1 mouse_genomes_project 12 110315368 110357343 - MGP_BALBcJ_P0035981 Ppp1r13b protein_coding protein_coding MGP_BALBcJ_T0035794.1 MGP_BALBcJ_G0020030.1 mouse_genomes_project 12 103733539 103776100 + MGP_BALBcJ_P0035794 D430019H16Rik protein_coding protein_coding MGP_BALBcJ_T0035585.1 MGP_BALBcJ_G0019951.1 mouse_genomes_project 12 96905770 96963374 + MGP_BALBcJ_P0035585 Ttc8 protein_coding protein_coding MGP_BALBcJ_T0035586.1 MGP_BALBcJ_G0019951.1 mouse_genomes_project 12 96905808 96963380 + MGP_BALBcJ_P0035586 Ttc8 protein_coding protein_coding MGP_BALBcJ_T0035587.1 MGP_BALBcJ_G0019951.1 mouse_genomes_project 12 96906016 96941773 + MGP_BALBcJ_P0035587 Ttc8 protein_coding protein_coding MGP_BALBcJ_T0035588.1 MGP_BALBcJ_G0019951.1 mouse_genomes_project 12 96923085 96950818 + Ttc8 protein_coding processed_transcript MGP_BALBcJ_T0035589.1 MGP_BALBcJ_G0019951.1 mouse_genomes_project 12 96954264 96962704 + Ttc8 protein_coding processed_transcript MGP_BALBcJ_T0035590.1 MGP_BALBcJ_G0019951.1 mouse_genomes_project 12 96954293 96959679 + Ttc8 protein_coding processed_transcript MGP_BALBcJ_T0035183.1 MGP_BALBcJ_G0019838.1 mouse_genomes_project 12 79072845 79075319 - MGP_BALBcJ_P0035183 Gm4787 protein_coding protein_coding MGP_BALBcJ_T0006478.1 MGP_BALBcJ_G0005384.1 mouse_genomes_project 12 111428288 111432438 - Gm26583 lincRNA lincRNA MGP_BALBcJ_T0035901.1 MGP_BALBcJ_G0020061.1 mouse_genomes_project 12 109151346 109219568 + MGP_BALBcJ_P0035901 protein_coding protein_coding MGP_BALBcJ_T0035902.1 MGP_BALBcJ_G0020061.1 mouse_genomes_project 12 109151382 109208435 + MGP_BALBcJ_P0035902 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035903.1 MGP_BALBcJ_G0020061.1 mouse_genomes_project 12 109151391 109153643 + protein_coding retained_intron MGP_BALBcJ_T0035904.1 MGP_BALBcJ_G0020061.1 mouse_genomes_project 12 109151420 109155859 + protein_coding processed_transcript MGP_BALBcJ_T0035905.1 MGP_BALBcJ_G0020061.1 mouse_genomes_project 12 109151611 109208607 + MGP_BALBcJ_P0035905 protein_coding protein_coding MGP_BALBcJ_T0098478.1 MGP_BALBcJ_G0036532.1 mouse_genomes_project 12 50348461 50348580 - n-R5s58 rRNA rRNA MGP_BALBcJ_T0034319.1 MGP_BALBcJ_G0019517.1 mouse_genomes_project 12 1750244 1758665 - MGP_BALBcJ_P0034319 Fkbp1b protein_coding protein_coding MGP_BALBcJ_T0034851.1 MGP_BALBcJ_G0019715.1 mouse_genomes_project 12 62487941 62511032 - MGP_BALBcJ_P0034851 Klhl28 protein_coding protein_coding MGP_BALBcJ_T0034377.1 MGP_BALBcJ_G0019535.1 mouse_genomes_project 12 6634513 6641555 + MGP_BALBcJ_P0034377 Osr1 protein_coding protein_coding MGP_BALBcJ_T0035769.1 MGP_BALBcJ_G0020013.1 mouse_genomes_project 12 102440543 102446724 + MGP_BALBcJ_P0035769 Serpina3j protein_coding protein_coding MGP_BALBcJ_T0035801.1 MGP_BALBcJ_G0020034.1 mouse_genomes_project 12 103968750 103986180 + MGP_BALBcJ_P0035801 Gskip protein_coding protein_coding MGP_BALBcJ_T0098491.1 MGP_BALBcJ_G0036545.1 mouse_genomes_project 12 118837924 118838042 - Gm25675 rRNA rRNA MGP_BALBcJ_T0003360.1 MGP_BALBcJ_G0003090.1 mouse_genomes_project 12 268220 292878 - 1110002L01Rik antisense antisense MGP_BALBcJ_T0003361.1 MGP_BALBcJ_G0003090.1 mouse_genomes_project 12 269651 292607 - 1110002L01Rik antisense antisense MGP_BALBcJ_T0003362.1 MGP_BALBcJ_G0003090.1 mouse_genomes_project 12 271672 292581 - 1110002L01Rik antisense antisense MGP_BALBcJ_T0003363.1 MGP_BALBcJ_G0003090.1 mouse_genomes_project 12 272190 292614 - 1110002L01Rik antisense antisense MGP_BALBcJ_T0000097.1 MGP_BALBcJ_G0000074.1 mouse_genomes_project 12 113200992 113201457 - MGP_BALBcJ_P0000097 Ighv10-3 IG_V_gene IG_V_gene MGP_BALBcJ_T0035869.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107827586 107828546 + Dlk1 protein_coding retained_intron MGP_BALBcJ_T0035870.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107827612 107838095 + MGP_BALBcJ_P0035870 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035871.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828218 107835459 + MGP_BALBcJ_P0035871 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035872.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828254 107835377 + MGP_BALBcJ_P0035872 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035873.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828254 107835140 + MGP_BALBcJ_P0035873 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035874.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828298 107838095 + MGP_BALBcJ_P0035874 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035875.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828418 107838095 + MGP_BALBcJ_P0035875 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035876.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828423 107835119 + MGP_BALBcJ_P0035876 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035877.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107828958 107834521 + MGP_BALBcJ_P0035877 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0035878.1 MGP_BALBcJ_G0020054.1 mouse_genomes_project 12 107834601 107835234 + MGP_BALBcJ_P0035878 Dlk1 protein_coding protein_coding MGP_BALBcJ_T0000074.1 MGP_BALBcJ_G0000058.1 mouse_genomes_project 12 112699667 112700053 - MGP_BALBcJ_P0000074 IG_V_gene IG_V_gene MGP_BALBcJ_T0035115.1 MGP_BALBcJ_G0019810.1 mouse_genomes_project 12 76523623 76541536 - MGP_BALBcJ_P0035115 Atp6v1d protein_coding protein_coding MGP_BALBcJ_T0034720.1 MGP_BALBcJ_G0019664.1 mouse_genomes_project 12 48898537 48910975 + MGP_BALBcJ_P0034720 Coch protein_coding protein_coding MGP_BALBcJ_T0034721.1 MGP_BALBcJ_G0019664.1 mouse_genomes_project 12 48898537 48910975 + MGP_BALBcJ_P0034721 Coch protein_coding protein_coding MGP_BALBcJ_T0035915.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109396314 109400002 - MGP_BALBcJ_P0035915 Ankrd9 protein_coding protein_coding MGP_BALBcJ_T0035916.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109397387 109399217 - MGP_BALBcJ_P0035916 Ankrd9 protein_coding protein_coding MGP_BALBcJ_T0035917.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109397388 109399905 - MGP_BALBcJ_P0035917 Ankrd9 protein_coding protein_coding MGP_BALBcJ_T0035918.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109397388 109399983 - MGP_BALBcJ_P0035918 Ankrd9 protein_coding protein_coding MGP_BALBcJ_T0035919.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109397388 109399580 - MGP_BALBcJ_P0035919 Ankrd9 protein_coding protein_coding MGP_BALBcJ_T0035920.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109397390 109399957 - MGP_BALBcJ_P0035920 Ankrd9 protein_coding protein_coding MGP_BALBcJ_T0035921.1 MGP_BALBcJ_G0020066.1 mouse_genomes_project 12 109398933 109399541 - Ankrd9 protein_coding processed_transcript MGP_BALBcJ_T0000864.1 MGP_BALBcJ_G0000796.1 mouse_genomes_project 12 110815970 110818723 - TEC TEC MGP_BALBcJ_T0011308.1 MGP_BALBcJ_G0009433.1 mouse_genomes_project 12 68519397 68519707 + Gm24857 misc_RNA misc_RNA MGP_BALBcJ_T0034376.1 MGP_BALBcJ_G0019534.1 mouse_genomes_project 12 6072602 6079004 + MGP_BALBcJ_P0034376 Ttc32 protein_coding protein_coding MGP_BALBcJ_T0011297.1 MGP_BALBcJ_G0009422.1 mouse_genomes_project 12 1297762 1298048 + Gm22343 misc_RNA misc_RNA MGP_BALBcJ_T0034293.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1038987 1115991 + Adcy3 protein_coding retained_intron MGP_BALBcJ_T0034294.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1038988 1115991 + MGP_BALBcJ_P0034294 Adcy3 protein_coding protein_coding MGP_BALBcJ_T0034295.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1039281 1115991 + MGP_BALBcJ_P0034295 Adcy3 protein_coding protein_coding MGP_BALBcJ_T0034296.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1039286 1115990 + MGP_BALBcJ_P0034296 Adcy3 protein_coding protein_coding MGP_BALBcJ_T0034297.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1040037 1115990 + MGP_BALBcJ_P0034297 Adcy3 protein_coding protein_coding MGP_BALBcJ_T0034298.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1064424 1087384 + Adcy3 protein_coding processed_transcript MGP_BALBcJ_T0034299.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1097479 1099499 + Adcy3 protein_coding retained_intron MGP_BALBcJ_T0034302.1 MGP_BALBcJ_G0019506.1 mouse_genomes_project 12 1105864 1108906 + Adcy3 protein_coding retained_intron MGP_BALBcJ_T0035682.1 MGP_BALBcJ_G0019980.1 mouse_genomes_project 12 100734905 100738707 + MGP_BALBcJ_P0035682 Tmem251 protein_coding protein_coding MGP_BALBcJ_T0034430.1 MGP_BALBcJ_G0019559.1 mouse_genomes_project 12 14320381 14325178 - MGP_BALBcJ_P0034430 Kcnf1 protein_coding protein_coding MGP_BALBcJ_T0006409.1 MGP_BALBcJ_G0005341.1 mouse_genomes_project 12 81842402 81857312 - 4732463B04Rik lincRNA lincRNA MGP_BALBcJ_T0034501.1 MGP_BALBcJ_G0019584.1 mouse_genomes_project 12 25879664 25886956 - protein_coding processed_transcript MGP_BALBcJ_T0034502.1 MGP_BALBcJ_G0019584.1 mouse_genomes_project 12 25886297 25895865 - protein_coding processed_transcript MGP_BALBcJ_T0034503.1 MGP_BALBcJ_G0019584.1 mouse_genomes_project 12 25886525 25922957 - MGP_BALBcJ_P0034503 protein_coding protein_coding MGP_BALBcJ_T0009792.1 MGP_BALBcJ_G0007917.1 mouse_genomes_project 12 87502168 87502234 + Gm23989 miRNA miRNA MGP_BALBcJ_T0034340.1 MGP_BALBcJ_G0019524.1 mouse_genomes_project 12 5180365 5255433 + MGP_BALBcJ_P0034340 Ldah protein_coding protein_coding MGP_BALBcJ_T0099351.1 MGP_BALBcJ_G0037387.1 mouse_genomes_project 12 111694258 111694362 + Gm25622 snRNA snRNA MGP_BALBcJ_T0006439.1 MGP_BALBcJ_G0005367.1 mouse_genomes_project 12 105472407 105485435 - Gm16084 lincRNA lincRNA MGP_BALBcJ_T0009786.1 MGP_BALBcJ_G0007911.1 mouse_genomes_project 12 83094330 83094393 - Mir6938 miRNA miRNA MGP_BALBcJ_T0035622.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98770284 98857714 + MGP_BALBcJ_P0035622 9030617O03Rik protein_coding protein_coding MGP_BALBcJ_T0035623.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98770305 98857458 + MGP_BALBcJ_P0035623 9030617O03Rik protein_coding protein_coding MGP_BALBcJ_T0035624.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98770313 98882854 + MGP_BALBcJ_P0035624 9030617O03Rik protein_coding protein_coding MGP_BALBcJ_T0035625.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98770322 98857458 + MGP_BALBcJ_P0035625 9030617O03Rik protein_coding protein_coding MGP_BALBcJ_T0035626.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98770363 98825976 + MGP_BALBcJ_P0035626 9030617O03Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035627.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98777579 98857452 + MGP_BALBcJ_P0035627 9030617O03Rik protein_coding protein_coding MGP_BALBcJ_T0035628.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98852312 98860504 + MGP_BALBcJ_P0035628 9030617O03Rik protein_coding protein_coding MGP_BALBcJ_T0035633.1 MGP_BALBcJ_G0019961.1 mouse_genomes_project 12 98871765 98881364 + 9030617O03Rik protein_coding processed_transcript MGP_BALBcJ_T0100615.1 MGP_BALBcJ_G0038651.1 mouse_genomes_project 12 108076331 108076400 + AF357428 snoRNA snoRNA MGP_BALBcJ_T0000268.1 MGP_BALBcJ_G0000209.1 mouse_genomes_project 12 114939923 114940356 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034388.1 MGP_BALBcJ_G0019542.1 mouse_genomes_project 12 8400465 8514972 - MGP_BALBcJ_P0034388 Vsnl1 protein_coding protein_coding MGP_BALBcJ_T0035953.1 MGP_BALBcJ_G0020080.1 mouse_genomes_project 12 110156045 110159812 - MGP_BALBcJ_P0035953 Bag5 protein_coding protein_coding MGP_BALBcJ_T0035954.1 MGP_BALBcJ_G0020080.1 mouse_genomes_project 12 110156461 110159482 - MGP_BALBcJ_P0035954 Bag5 protein_coding protein_coding MGP_BALBcJ_T0035955.1 MGP_BALBcJ_G0020080.1 mouse_genomes_project 12 110157766 110159508 - MGP_BALBcJ_P0035955 Bag5 protein_coding protein_coding MGP_BALBcJ_T0035956.1 MGP_BALBcJ_G0020080.1 mouse_genomes_project 12 110157832 110159508 - MGP_BALBcJ_P0035956 Bag5 protein_coding protein_coding MGP_BALBcJ_T0009875.1 MGP_BALBcJ_G0008000.1 mouse_genomes_project 12 110581708 110581784 + Mir203 miRNA miRNA MGP_BALBcJ_T0034621.1 MGP_BALBcJ_G0019628.1 mouse_genomes_project 12 32854835 32890748 - MGP_BALBcJ_P0034621 Ahr protein_coding protein_coding MGP_BALBcJ_T0034622.1 MGP_BALBcJ_G0019628.1 mouse_genomes_project 12 32861734 32890331 - MGP_BALBcJ_P0034622 Ahr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034623.1 MGP_BALBcJ_G0019628.1 mouse_genomes_project 12 32871453 32882421 - Ahr protein_coding retained_intron MGP_BALBcJ_T0035685.1 MGP_BALBcJ_G0019982.1 mouse_genomes_project 12 100749715 100770207 + MGP_BALBcJ_P0035685 Ubr7 protein_coding protein_coding MGP_BALBcJ_T0034290.1 MGP_BALBcJ_G0019504.1 mouse_genomes_project 12 869873 945673 - MGP_BALBcJ_P0034290 Efr3b protein_coding protein_coding MGP_BALBcJ_T0011318.1 MGP_BALBcJ_G0009443.1 mouse_genomes_project 12 107939450 107939547 + Gm27335 misc_RNA misc_RNA MGP_BALBcJ_T0100582.1 MGP_BALBcJ_G0038618.1 mouse_genomes_project 12 62595985 62596071 + Gm25970 snoRNA snoRNA MGP_BALBcJ_T0035645.1 MGP_BALBcJ_G0019967.1 mouse_genomes_project 12 99719468 99794959 - MGP_BALBcJ_P0035645 Fbln5 protein_coding protein_coding MGP_BALBcJ_T0036066.1 MGP_BALBcJ_G0020116.1 mouse_genomes_project 12 111671070 111674671 + MGP_BALBcJ_P0036066 Tmem121 protein_coding protein_coding MGP_BALBcJ_T0009849.1 MGP_BALBcJ_G0007974.1 mouse_genomes_project 12 108120982 108121061 + Mir300 miRNA miRNA MGP_BALBcJ_T0100578.1 MGP_BALBcJ_G0038614.1 mouse_genomes_project 12 56594627 56594749 + Gm24233 snoRNA snoRNA MGP_BALBcJ_T0035661.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100256306 100364086 + MGP_BALBcJ_P0035661 Rin3 protein_coding protein_coding MGP_BALBcJ_T0035662.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100256425 100335741 + MGP_BALBcJ_P0035662 Rin3 protein_coding protein_coding MGP_BALBcJ_T0035663.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100256426 100299489 + MGP_BALBcJ_P0035663 Rin3 protein_coding protein_coding MGP_BALBcJ_T0035664.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100256885 100364086 + MGP_BALBcJ_P0035664 Rin3 protein_coding protein_coding MGP_BALBcJ_T0035665.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100327379 100334162 + Rin3 protein_coding processed_transcript MGP_BALBcJ_T0035666.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100327379 100341713 + Rin3 protein_coding processed_transcript MGP_BALBcJ_T0035667.1 MGP_BALBcJ_G0019972.1 mouse_genomes_project 12 100327414 100331886 + Rin3 protein_coding retained_intron MGP_BALBcJ_T0012825.1 MGP_BALBcJ_G0010922.1 mouse_genomes_project 12 102323229 102324316 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009850.1 MGP_BALBcJ_G0007975.1 mouse_genomes_project 12 108123491 108123566 + Mir381 miRNA miRNA MGP_BALBcJ_T0035347.1 MGP_BALBcJ_G0019881.1 mouse_genomes_project 12 82583283 82601806 - MGP_BALBcJ_P0035347 Npc2 protein_coding protein_coding MGP_BALBcJ_T0034447.1 MGP_BALBcJ_G0019565.1 mouse_genomes_project 12 18391939 18488448 + MGP_BALBcJ_P0034447 Asap2 protein_coding protein_coding MGP_BALBcJ_T0034448.1 MGP_BALBcJ_G0019565.1 mouse_genomes_project 12 18391939 18488448 + MGP_BALBcJ_P0034448 Asap2 protein_coding protein_coding MGP_BALBcJ_T0034449.1 MGP_BALBcJ_G0019565.1 mouse_genomes_project 12 18391939 18488448 + MGP_BALBcJ_P0034449 Asap2 protein_coding protein_coding MGP_BALBcJ_T0034450.1 MGP_BALBcJ_G0019565.1 mouse_genomes_project 12 18391939 18486649 + MGP_BALBcJ_P0034450 Asap2 protein_coding protein_coding MGP_BALBcJ_T0035838.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106713543 106854384 + Eml1 protein_coding retained_intron MGP_BALBcJ_T0035839.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106766777 106885249 + MGP_BALBcJ_P0035839 Eml1 protein_coding protein_coding MGP_BALBcJ_T0035840.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106767039 106883217 + MGP_BALBcJ_P0035840 Eml1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035841.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106767156 106885258 + MGP_BALBcJ_P0035841 Eml1 protein_coding protein_coding MGP_BALBcJ_T0035842.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106817489 106885249 + Eml1 protein_coding processed_transcript MGP_BALBcJ_T0035843.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106880604 106883112 + Eml1 protein_coding processed_transcript MGP_BALBcJ_T0035844.1 MGP_BALBcJ_G0020045.1 mouse_genomes_project 12 106880662 106885302 + Eml1 protein_coding processed_transcript MGP_BALBcJ_T0035571.1 MGP_BALBcJ_G0019947.1 mouse_genomes_project 12 96594619 96636249 + MGP_BALBcJ_P0035571 Spata7 protein_coding protein_coding MGP_BALBcJ_T0035572.1 MGP_BALBcJ_G0019947.1 mouse_genomes_project 12 96594624 96605687 + Spata7 protein_coding retained_intron MGP_BALBcJ_T0035573.1 MGP_BALBcJ_G0019947.1 mouse_genomes_project 12 96594629 96636249 + MGP_BALBcJ_P0035573 Spata7 protein_coding protein_coding MGP_BALBcJ_T0035574.1 MGP_BALBcJ_G0019947.1 mouse_genomes_project 12 96594652 96599216 + Spata7 protein_coding retained_intron MGP_BALBcJ_T0035575.1 MGP_BALBcJ_G0019947.1 mouse_genomes_project 12 96594659 96636246 + MGP_BALBcJ_P0035575 Spata7 protein_coding protein_coding MGP_BALBcJ_T0035576.1 MGP_BALBcJ_G0019947.1 mouse_genomes_project 12 96630374 96635712 + Spata7 protein_coding retained_intron MGP_BALBcJ_T0009884.1 MGP_BALBcJ_G0008009.1 mouse_genomes_project 12 116155976 116156045 + Mir153 miRNA miRNA MGP_BALBcJ_T0034236.1 MGP_BALBcJ_G0019497.1 mouse_genomes_project 12 106632 169049 - MGP_BALBcJ_P0034236 Rab10 protein_coding protein_coding MGP_BALBcJ_T0034894.1 MGP_BALBcJ_G0019734.1 mouse_genomes_project 12 66952301 66956132 + MGP_BALBcJ_P0034894 Arf6 protein_coding protein_coding MGP_BALBcJ_T0099354.1 MGP_BALBcJ_G0037390.1 mouse_genomes_project 12 117418392 117418499 - Gm25577 snRNA snRNA MGP_BALBcJ_T0035715.1 MGP_BALBcJ_G0019990.1 mouse_genomes_project 12 101403416 101404415 - MGP_BALBcJ_P0035715 9330161L09Rik protein_coding protein_coding MGP_BALBcJ_T0035449.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825291 84841673 + MGP_BALBcJ_P0035449 Cipc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035450.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825291 84840533 + MGP_BALBcJ_P0035450 Cipc protein_coding protein_coding MGP_BALBcJ_T0035451.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825347 84839833 + MGP_BALBcJ_P0035451 Cipc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035452.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825591 84843228 + MGP_BALBcJ_P0035452 Cipc protein_coding protein_coding MGP_BALBcJ_T0035453.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825644 84831414 + Cipc protein_coding retained_intron MGP_BALBcJ_T0035454.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825666 84838257 + MGP_BALBcJ_P0035454 Cipc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035455.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825702 84838256 + MGP_BALBcJ_P0035455 Cipc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035456.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825714 84838173 + MGP_BALBcJ_P0035456 Cipc protein_coding protein_coding MGP_BALBcJ_T0035457.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84825738 84839749 + MGP_BALBcJ_P0035457 Cipc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035458.1 MGP_BALBcJ_G0019911.1 mouse_genomes_project 12 84830905 84840699 + MGP_BALBcJ_P0035458 Cipc protein_coding protein_coding MGP_BALBcJ_T0035822.1 MGP_BALBcJ_G0020037.1 mouse_genomes_project 12 104313774 104379020 + MGP_BALBcJ_P0035822 Vrk1 protein_coding protein_coding MGP_BALBcJ_T0035823.1 MGP_BALBcJ_G0020037.1 mouse_genomes_project 12 104314780 104381385 + MGP_BALBcJ_P0035823 Vrk1 protein_coding protein_coding MGP_BALBcJ_T0035068.1 MGP_BALBcJ_G0019792.1 mouse_genomes_project 12 73999089 74008271 + MGP_BALBcJ_P0035068 Akap5 protein_coding protein_coding MGP_BALBcJ_T0035069.1 MGP_BALBcJ_G0019792.1 mouse_genomes_project 12 73999089 74008273 + MGP_BALBcJ_P0035069 Akap5 protein_coding protein_coding MGP_BALBcJ_T0035070.1 MGP_BALBcJ_G0019792.1 mouse_genomes_project 12 73999103 74004181 + MGP_BALBcJ_P0035070 Akap5 protein_coding protein_coding MGP_BALBcJ_T0009788.1 MGP_BALBcJ_G0007913.1 mouse_genomes_project 12 84913244 84913340 + Gm25847 miRNA miRNA MGP_BALBcJ_T0006366.1 MGP_BALBcJ_G0005309.1 mouse_genomes_project 12 8516796 8523373 + 4930511A02Rik lincRNA lincRNA MGP_BALBcJ_T0012813.1 MGP_BALBcJ_G0010910.1 mouse_genomes_project 12 84945869 84945984 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036088.1 MGP_BALBcJ_G0020123.1 mouse_genomes_project 12 116424167 116667407 + MGP_BALBcJ_P0036088 Rapgef5 protein_coding protein_coding MGP_BALBcJ_T0036089.1 MGP_BALBcJ_G0020123.1 mouse_genomes_project 12 116442053 116670170 + MGP_BALBcJ_P0036089 Rapgef5 protein_coding unknown_likely_coding MGP_BALBcJ_T0035448.1 MGP_BALBcJ_G0019910.1 mouse_genomes_project 12 84605173 84634433 + MGP_BALBcJ_P0035448 Lrrc74a protein_coding protein_coding MGP_BALBcJ_T0099317.1 MGP_BALBcJ_G0037353.1 mouse_genomes_project 12 49049450 49049552 - Gm22663 snRNA snRNA MGP_BALBcJ_T0012787.1 MGP_BALBcJ_G0010884.1 mouse_genomes_project 12 52302196 52303359 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035071.1 MGP_BALBcJ_G0019793.1 mouse_genomes_project 12 74023156 74037444 - MGP_BALBcJ_P0035071 Zbtb25 protein_coding protein_coding MGP_BALBcJ_T0035072.1 MGP_BALBcJ_G0019793.1 mouse_genomes_project 12 74024597 74049746 - MGP_BALBcJ_P0035072 Zbtb25 protein_coding protein_coding MGP_BALBcJ_T0035073.1 MGP_BALBcJ_G0019793.1 mouse_genomes_project 12 74024641 74049281 - MGP_BALBcJ_P0035073 Zbtb25 protein_coding protein_coding MGP_BALBcJ_T0035074.1 MGP_BALBcJ_G0019793.1 mouse_genomes_project 12 74024642 74049884 - MGP_BALBcJ_P0035074 Zbtb25 protein_coding protein_coding MGP_BALBcJ_T0035075.1 MGP_BALBcJ_G0019793.1 mouse_genomes_project 12 74025723 74049675 - MGP_BALBcJ_P0035075 Zbtb25 protein_coding protein_coding MGP_BALBcJ_T0035076.1 MGP_BALBcJ_G0019793.1 mouse_genomes_project 12 74025840 74049746 - MGP_BALBcJ_P0035076 Zbtb25 protein_coding protein_coding MGP_BALBcJ_T0036098.1 MGP_BALBcJ_G0020127.1 mouse_genomes_project 12 117766917 117773157 + MGP_BALBcJ_P0036098 Sp8 protein_coding protein_coding MGP_BALBcJ_T0034389.1 MGP_BALBcJ_G0019543.1 mouse_genomes_project 12 8534877 8541725 + MGP_BALBcJ_P0034389 Rad51ap2 protein_coding protein_coding MGP_BALBcJ_T0035435.1 MGP_BALBcJ_G0019907.1 mouse_genomes_project 12 84218522 84383449 + MGP_BALBcJ_P0035435 Esrrb protein_coding protein_coding MGP_BALBcJ_T0035436.1 MGP_BALBcJ_G0019907.1 mouse_genomes_project 12 84279676 84383446 + MGP_BALBcJ_P0035436 Esrrb protein_coding protein_coding MGP_BALBcJ_T0035437.1 MGP_BALBcJ_G0019907.1 mouse_genomes_project 12 84279676 84376669 + MGP_BALBcJ_P0035437 Esrrb protein_coding protein_coding MGP_BALBcJ_T0035438.1 MGP_BALBcJ_G0019907.1 mouse_genomes_project 12 84279915 84381621 + MGP_BALBcJ_P0035438 Esrrb protein_coding protein_coding MGP_BALBcJ_T0035439.1 MGP_BALBcJ_G0019907.1 mouse_genomes_project 12 84331912 84380886 + MGP_BALBcJ_P0035439 Esrrb protein_coding protein_coding MGP_BALBcJ_T0035440.1 MGP_BALBcJ_G0019907.1 mouse_genomes_project 12 84365555 84371114 + Esrrb protein_coding processed_transcript MGP_BALBcJ_T0035310.1 MGP_BALBcJ_G0019869.1 mouse_genomes_project 12 82126698 82161173 + MGP_BALBcJ_P0035310 Zfp410 protein_coding protein_coding MGP_BALBcJ_T0000068.1 MGP_BALBcJ_G0000052.1 mouse_genomes_project 12 112506597 112507027 - MGP_BALBcJ_P0000068 Ighv3-1 IG_V_gene IG_V_gene MGP_BALBcJ_T0034378.1 MGP_BALBcJ_G0019536.1 mouse_genomes_project 12 7453379 7476503 + MGP_BALBcJ_P0034378 Nt5c1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034379.1 MGP_BALBcJ_G0019536.1 mouse_genomes_project 12 7453385 7476506 + MGP_BALBcJ_P0034379 Nt5c1b protein_coding protein_coding MGP_BALBcJ_T0034380.1 MGP_BALBcJ_G0019536.1 mouse_genomes_project 12 7453385 7459131 + MGP_BALBcJ_P0034380 Nt5c1b protein_coding protein_coding MGP_BALBcJ_T0034381.1 MGP_BALBcJ_G0019536.1 mouse_genomes_project 12 7453450 7476503 + MGP_BALBcJ_P0034381 Nt5c1b protein_coding protein_coding MGP_BALBcJ_T0034637.1 MGP_BALBcJ_G0019636.1 mouse_genomes_project 12 33661659 33665940 + MGP_BALBcJ_P0034637 Sostdc1 protein_coding protein_coding MGP_BALBcJ_T0006446.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107934755 107940431 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006447.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107934759 107968281 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006448.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107934761 107955675 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006449.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107935777 107958168 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006451.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107939609 107954806 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006452.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107941325 107968286 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006453.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107942318 107968279 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006454.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107942372 107968282 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006455.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107945643 107955289 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0006456.1 MGP_BALBcJ_G0005373.1 mouse_genomes_project 12 107945731 107946252 + Meg3 lincRNA lincRNA MGP_BALBcJ_T0012793.1 MGP_BALBcJ_G0010890.1 mouse_genomes_project 12 56752487 56753462 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035336.1 MGP_BALBcJ_G0019874.1 mouse_genomes_project 12 82234273 82235656 + MGP_BALBcJ_P0035336 Rnf113a2 protein_coding protein_coding MGP_BALBcJ_T0009854.1 MGP_BALBcJ_G0007979.1 mouse_genomes_project 12 108125490 108125613 + Gm27379 miRNA miRNA MGP_BALBcJ_T0012830.1 MGP_BALBcJ_G0010927.1 mouse_genomes_project 12 105529057 105530048 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006413.1 MGP_BALBcJ_G0005345.1 mouse_genomes_project 12 84766346 84767507 - Gm26698 lincRNA lincRNA MGP_BALBcJ_T0012815.1 MGP_BALBcJ_G0010912.1 mouse_genomes_project 12 89398440 89399230 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035824.1 MGP_BALBcJ_G0020038.1 mouse_genomes_project 12 105814237 105815242 + MGP_BALBcJ_P0035824 3110018I06Rik protein_coding protein_coding MGP_BALBcJ_T0009756.1 MGP_BALBcJ_G0007881.1 mouse_genomes_project 12 8374205 8374263 + Mir7675 miRNA miRNA MGP_BALBcJ_T0100621.1 MGP_BALBcJ_G0038657.1 mouse_genomes_project 12 108083360 108083432 + Gm25854 snoRNA snoRNA MGP_BALBcJ_T0035105.1 MGP_BALBcJ_G0019805.1 mouse_genomes_project 12 74929871 75149716 + MGP_BALBcJ_P0035105 Fut8 protein_coding protein_coding MGP_BALBcJ_T0035106.1 MGP_BALBcJ_G0019805.1 mouse_genomes_project 12 74929871 75149716 + MGP_BALBcJ_P0035106 Fut8 protein_coding protein_coding MGP_BALBcJ_T0035107.1 MGP_BALBcJ_G0019805.1 mouse_genomes_project 12 74930832 75150058 + MGP_BALBcJ_P0035107 Fut8 protein_coding protein_coding MGP_BALBcJ_T0006398.1 MGP_BALBcJ_G0005332.1 mouse_genomes_project 12 74083446 74084344 - 4930426I24Rik lincRNA lincRNA MGP_BALBcJ_T0035591.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97177408 97377291 - MGP_BALBcJ_P0035591 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035592.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97177516 97376566 - MGP_BALBcJ_P0035592 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035593.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97177516 97434119 - MGP_BALBcJ_P0035593 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035594.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97179209 97273909 - MGP_BALBcJ_P0035594 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035595.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97191931 97273908 - MGP_BALBcJ_P0035595 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035596.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97273894 97340068 - Foxn3 protein_coding processed_transcript MGP_BALBcJ_T0035597.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97324056 97395881 - MGP_BALBcJ_P0035597 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035598.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97370939 97434142 - Foxn3 protein_coding retained_intron MGP_BALBcJ_T0035599.1 MGP_BALBcJ_G0019952.1 mouse_genomes_project 12 97371973 97434156 - MGP_BALBcJ_P0035599 Foxn3 protein_coding protein_coding MGP_BALBcJ_T0035465.1 MGP_BALBcJ_G0019914.1 mouse_genomes_project 12 84977152 84982701 - MGP_BALBcJ_P0035465 Ngb protein_coding protein_coding MGP_BALBcJ_T0035466.1 MGP_BALBcJ_G0019914.1 mouse_genomes_project 12 84977152 84982684 - MGP_BALBcJ_P0035466 Ngb protein_coding protein_coding MGP_BALBcJ_T0035467.1 MGP_BALBcJ_G0019914.1 mouse_genomes_project 12 84977646 84982512 - MGP_BALBcJ_P0035467 Ngb protein_coding protein_coding MGP_BALBcJ_T0036029.1 MGP_BALBcJ_G0020106.1 mouse_genomes_project 12 111415557 111422943 - MGP_BALBcJ_P0036029 Nudt14 protein_coding protein_coding MGP_BALBcJ_T0035658.1 MGP_BALBcJ_G0019971.1 mouse_genomes_project 12 100101191 100241042 + MGP_BALBcJ_P0035658 Slc24a4 protein_coding protein_coding MGP_BALBcJ_T0035659.1 MGP_BALBcJ_G0019971.1 mouse_genomes_project 12 100101632 100240700 + MGP_BALBcJ_P0035659 Slc24a4 protein_coding protein_coding MGP_BALBcJ_T0035660.1 MGP_BALBcJ_G0019971.1 mouse_genomes_project 12 100101848 100240448 + MGP_BALBcJ_P0035660 Slc24a4 protein_coding protein_coding MGP_BALBcJ_T0101851.1 MGP_BALBcJ_G0039768.1 mouse_genomes_project 12 102355899 102360641 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0034405.1 MGP_BALBcJ_G0019553.1 mouse_genomes_project 12 13798459 13805176 + MGP_BALBcJ_P0034405 Ntsr2 protein_coding protein_coding MGP_BALBcJ_T0000012.1 MGP_BALBcJ_G0000009.1 mouse_genomes_project 12 111899386 111912225 - MGP_BALBcJ_P0000012 Ighd IG_C_gene IG_C_gene MGP_BALBcJ_T0000013.1 MGP_BALBcJ_G0000009.1 mouse_genomes_project 12 111902328 111912225 - MGP_BALBcJ_P0000013 Ighd IG_C_gene IG_C_gene MGP_BALBcJ_T0036067.1 MGP_BALBcJ_G0000009.1 mouse_genomes_project 12 111900313 111912205 - MGP_BALBcJ_P0036067 Ighd IG_C_gene unknown_likely_coding MGP_BALBcJ_T0036068.1 MGP_BALBcJ_G0000009.1 mouse_genomes_project 12 111900313 111912064 - MGP_BALBcJ_P0036068 Ighd IG_C_gene unknown_likely_coding MGP_BALBcJ_T0000855.1 MGP_BALBcJ_G0000787.1 mouse_genomes_project 12 80738637 80739948 - TEC TEC MGP_BALBcJ_T0034992.1 MGP_BALBcJ_G0019764.1 mouse_genomes_project 12 70162705 70200245 + MGP_BALBcJ_P0034992 Pcnx4 protein_coding protein_coding MGP_BALBcJ_T0009782.1 MGP_BALBcJ_G0007907.1 mouse_genomes_project 12 74213642 74213721 - Mir5135 miRNA miRNA MGP_BALBcJ_T0000257.1 MGP_BALBcJ_G0000198.1 mouse_genomes_project 12 113846421 113846855 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0000039.1 MGP_BALBcJ_G0000031.1 mouse_genomes_project 12 111927266 111927319 - MGP_BALBcJ_P0000039 Ighj1 IG_J_gene IG_J_gene MGP_BALBcJ_T0034451.1 MGP_BALBcJ_G0019566.1 mouse_genomes_project 12 18488077 18504277 - MGP_BALBcJ_P0034451 Itgb1bp1 protein_coding protein_coding MGP_BALBcJ_T0034452.1 MGP_BALBcJ_G0019566.1 mouse_genomes_project 12 18488369 18504137 - MGP_BALBcJ_P0034452 Itgb1bp1 protein_coding protein_coding MGP_BALBcJ_T0034453.1 MGP_BALBcJ_G0019566.1 mouse_genomes_project 12 18488976 18490396 - MGP_BALBcJ_P0034453 Itgb1bp1 protein_coding protein_coding MGP_BALBcJ_T0034454.1 MGP_BALBcJ_G0019566.1 mouse_genomes_project 12 18489560 18504225 - MGP_BALBcJ_P0034454 Itgb1bp1 protein_coding protein_coding MGP_BALBcJ_T0034455.1 MGP_BALBcJ_G0019566.1 mouse_genomes_project 12 18489698 18491049 - Itgb1bp1 protein_coding retained_intron MGP_BALBcJ_T0000036.1 MGP_BALBcJ_G0000029.1 mouse_genomes_project 12 111926570 111926618 - MGP_BALBcJ_P0000036 Ighj3 IG_J_gene IG_J_gene MGP_BALBcJ_T0035913.1 MGP_BALBcJ_G0020065.1 mouse_genomes_project 12 109310140 109393369 + MGP_BALBcJ_P0035913 Tecpr2 protein_coding protein_coding MGP_BALBcJ_T0035914.1 MGP_BALBcJ_G0020065.1 mouse_genomes_project 12 109310140 109393371 + MGP_BALBcJ_P0035914 Tecpr2 protein_coding protein_coding MGP_BALBcJ_T0003404.1 MGP_BALBcJ_G0003125.1 mouse_genomes_project 12 101844635 101847893 + B430119L08Rik antisense antisense MGP_BALBcJ_T0012812.1 MGP_BALBcJ_G0010909.1 mouse_genomes_project 12 84585777 84586236 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034727.1 MGP_BALBcJ_G0019668.1 mouse_genomes_project 12 49190232 49285184 - MGP_BALBcJ_P0034727 Heatr5a protein_coding protein_coding MGP_BALBcJ_T0034728.1 MGP_BALBcJ_G0019668.1 mouse_genomes_project 12 49192465 49285111 - MGP_BALBcJ_P0034728 Heatr5a protein_coding unknown_likely_coding MGP_BALBcJ_T0000100.1 MGP_BALBcJ_G0000077.1 mouse_genomes_project 12 113240440 113240920 - MGP_BALBcJ_P0000100 Ighv10-1 IG_V_gene IG_V_gene MGP_BALBcJ_T0034817.1 MGP_BALBcJ_G0019707.1 mouse_genomes_project 12 56526335 56533433 + MGP_BALBcJ_P0034817 Pnn protein_coding protein_coding MGP_BALBcJ_T0035381.1 MGP_BALBcJ_G0019891.1 mouse_genomes_project 12 83013817 83023473 - MGP_BALBcJ_P0035381 Pgf protein_coding protein_coding MGP_BALBcJ_T0012778.1 MGP_BALBcJ_G0010875.1 mouse_genomes_project 12 15431730 15432360 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035771.1 MGP_BALBcJ_G0020015.1 mouse_genomes_project 12 102481455 102565545 + MGP_BALBcJ_P0035771 Serpina3m protein_coding protein_coding MGP_BALBcJ_T0035772.1 MGP_BALBcJ_G0020015.1 mouse_genomes_project 12 102558440 102565546 + MGP_BALBcJ_P0035772 Serpina3m protein_coding protein_coding MGP_BALBcJ_T0098487.1 MGP_BALBcJ_G0036541.1 mouse_genomes_project 12 95370328 95370408 - Gm23558 rRNA rRNA MGP_BALBcJ_T0034783.1 MGP_BALBcJ_G0019696.1 mouse_genomes_project 12 54133555 54155787 + MGP_BALBcJ_P0034783 Pax9 protein_coding protein_coding MGP_BALBcJ_T0034784.1 MGP_BALBcJ_G0019696.1 mouse_genomes_project 12 54137428 54155902 + MGP_BALBcJ_P0034784 Pax9 protein_coding protein_coding MGP_BALBcJ_T0034785.1 MGP_BALBcJ_G0019696.1 mouse_genomes_project 12 54137518 54152786 + Pax9 protein_coding retained_intron MGP_BALBcJ_T0102178.1 MGP_BALBcJ_G0039994.1 mouse_genomes_project 12 101711866 101952829 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0034773.1 MGP_BALBcJ_G0019688.1 mouse_genomes_project 12 52942374 52945427 - MGP_BALBcJ_P0034773 Nfkbia protein_coding protein_coding MGP_BALBcJ_T0034897.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67153167 67156530 - Sos2 protein_coding retained_intron MGP_BALBcJ_T0034898.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67153171 67253394 - MGP_BALBcJ_P0034898 Sos2 protein_coding protein_coding MGP_BALBcJ_T0034899.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67154260 67253383 - MGP_BALBcJ_P0034899 Sos2 protein_coding protein_coding MGP_BALBcJ_T0034900.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67154496 67253169 - MGP_BALBcJ_P0034900 Sos2 protein_coding protein_coding MGP_BALBcJ_T0034901.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67154782 67158212 - Sos2 protein_coding retained_intron MGP_BALBcJ_T0034902.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67163925 67166808 - Sos2 protein_coding retained_intron MGP_BALBcJ_T0034903.1 MGP_BALBcJ_G0019736.1 mouse_genomes_project 12 67184687 67187360 - Sos2 protein_coding retained_intron MGP_BALBcJ_T0009862.1 MGP_BALBcJ_G0007987.1 mouse_genomes_project 12 108135776 108135855 + Mir496a miRNA miRNA MGP_BALBcJ_T0003400.1 MGP_BALBcJ_G0003122.1 mouse_genomes_project 12 100601141 100606978 + Gm20069 antisense antisense MGP_BALBcJ_T0035005.1 MGP_BALBcJ_G0019769.1 mouse_genomes_project 12 70573173 70578172 + MGP_BALBcJ_P0035005 Six6 protein_coding protein_coding MGP_BALBcJ_T0036039.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111559299 111620922 + MGP_BALBcJ_P0036039 Mta1 protein_coding unknown_likely_coding MGP_BALBcJ_T0036040.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111582538 111620912 + MGP_BALBcJ_P0036040 Mta1 protein_coding protein_coding MGP_BALBcJ_T0036041.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111582538 111620913 + MGP_BALBcJ_P0036041 Mta1 protein_coding protein_coding MGP_BALBcJ_T0036042.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111582538 111620913 + MGP_BALBcJ_P0036042 Mta1 protein_coding protein_coding MGP_BALBcJ_T0036043.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111582538 111620913 + MGP_BALBcJ_P0036043 Mta1 protein_coding protein_coding MGP_BALBcJ_T0036044.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111583677 111620922 + MGP_BALBcJ_P0036044 Mta1 protein_coding unknown_likely_coding MGP_BALBcJ_T0036045.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111595920 111620880 + MGP_BALBcJ_P0036045 Mta1 protein_coding protein_coding MGP_BALBcJ_T0036046.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111595975 111620376 + Mta1 protein_coding processed_transcript MGP_BALBcJ_T0036047.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111615038 111617087 + Mta1 protein_coding processed_transcript MGP_BALBcJ_T0036048.1 MGP_BALBcJ_G0020112.1 mouse_genomes_project 12 111615254 111617045 + Mta1 protein_coding processed_transcript MGP_BALBcJ_T0098745.1 MGP_BALBcJ_G0036799.1 mouse_genomes_project 12 78081796 78081935 - Scarna3b scaRNA scaRNA MGP_BALBcJ_T0034289.1 MGP_BALBcJ_G0019503.1 mouse_genomes_project 12 861697 867365 + MGP_BALBcJ_P0034289 Pomc protein_coding protein_coding MGP_BALBcJ_T0035349.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82611784 82704931 - MGP_BALBcJ_P0035349 Ltbp2 protein_coding protein_coding MGP_BALBcJ_T0035350.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82611785 82704894 - MGP_BALBcJ_P0035350 Ltbp2 protein_coding protein_coding MGP_BALBcJ_T0035351.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82611901 82704878 - MGP_BALBcJ_P0035351 Ltbp2 protein_coding protein_coding MGP_BALBcJ_T0035352.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82613778 82620423 - MGP_BALBcJ_P0035352 Ltbp2 protein_coding protein_coding MGP_BALBcJ_T0035353.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82614951 82621551 - MGP_BALBcJ_P0035353 Ltbp2 protein_coding protein_coding MGP_BALBcJ_T0035354.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82620438 82628043 - MGP_BALBcJ_P0035354 Ltbp2 protein_coding protein_coding MGP_BALBcJ_T0035355.1 MGP_BALBcJ_G0019883.1 mouse_genomes_project 12 82636292 82704890 - Ltbp2 protein_coding retained_intron MGP_BALBcJ_T0035728.1 MGP_BALBcJ_G0019994.1 mouse_genomes_project 12 101528502 101613728 + MGP_BALBcJ_P0035728 Ppp4r4 protein_coding protein_coding MGP_BALBcJ_T0035729.1 MGP_BALBcJ_G0019994.1 mouse_genomes_project 12 101529284 101612801 + MGP_BALBcJ_P0035729 Ppp4r4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035730.1 MGP_BALBcJ_G0019994.1 mouse_genomes_project 12 101554871 101612963 + MGP_BALBcJ_P0035730 Ppp4r4 protein_coding protein_coding MGP_BALBcJ_T0035731.1 MGP_BALBcJ_G0019994.1 mouse_genomes_project 12 101578163 101588365 + MGP_BALBcJ_P0035731 Ppp4r4 protein_coding protein_coding MGP_BALBcJ_T0035732.1 MGP_BALBcJ_G0019994.1 mouse_genomes_project 12 101597740 101602487 + MGP_BALBcJ_P0035732 Ppp4r4 protein_coding protein_coding MGP_BALBcJ_T0000851.1 MGP_BALBcJ_G0000783.1 mouse_genomes_project 12 54054200 54055064 - TEC TEC MGP_BALBcJ_T0036060.1 MGP_BALBcJ_G0020115.1 mouse_genomes_project 12 111640121 111648229 + MGP_BALBcJ_P0036060 4930427A07Rik protein_coding protein_coding MGP_BALBcJ_T0036061.1 MGP_BALBcJ_G0020115.1 mouse_genomes_project 12 111640130 111640628 + 4930427A07Rik protein_coding retained_intron MGP_BALBcJ_T0036062.1 MGP_BALBcJ_G0020115.1 mouse_genomes_project 12 111640140 111649934 + MGP_BALBcJ_P0036062 4930427A07Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036063.1 MGP_BALBcJ_G0020115.1 mouse_genomes_project 12 111640156 111641291 + 4930427A07Rik protein_coding retained_intron MGP_BALBcJ_T0036064.1 MGP_BALBcJ_G0020115.1 mouse_genomes_project 12 111640206 111645489 + MGP_BALBcJ_P0036064 4930427A07Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036065.1 MGP_BALBcJ_G0020115.1 mouse_genomes_project 12 111641272 111648232 + 4930427A07Rik protein_coding retained_intron MGP_BALBcJ_T0006420.1 MGP_BALBcJ_G0005352.1 mouse_genomes_project 12 97611369 97613291 - 1700064M15Rik lincRNA lincRNA MGP_BALBcJ_T0006435.1 MGP_BALBcJ_G0005363.1 mouse_genomes_project 12 105160287 105201579 + 1700013N06Rik lincRNA lincRNA MGP_BALBcJ_T0035067.1 MGP_BALBcJ_G0019791.1 mouse_genomes_project 12 73928314 73994019 + MGP_BALBcJ_P0035067 Mthfd1 protein_coding protein_coding MGP_BALBcJ_T0035263.1 MGP_BALBcJ_G0019854.1 mouse_genomes_project 12 81567470 81596653 + MGP_BALBcJ_P0035263 Papln protein_coding protein_coding MGP_BALBcJ_T0035264.1 MGP_BALBcJ_G0019854.1 mouse_genomes_project 12 81567490 81596626 + MGP_BALBcJ_P0035264 Papln protein_coding protein_coding MGP_BALBcJ_T0035265.1 MGP_BALBcJ_G0019854.1 mouse_genomes_project 12 81567498 81585403 + Papln protein_coding retained_intron MGP_BALBcJ_T0035481.1 MGP_BALBcJ_G0019922.1 mouse_genomes_project 12 85162628 85183450 - MGP_BALBcJ_P0035481 Ism2 protein_coding protein_coding MGP_BALBcJ_T0035482.1 MGP_BALBcJ_G0019922.1 mouse_genomes_project 12 85163672 85171051 - MGP_BALBcJ_P0035482 Ism2 protein_coding protein_coding MGP_BALBcJ_T0035483.1 MGP_BALBcJ_G0019922.1 mouse_genomes_project 12 85166393 85170987 - Ism2 protein_coding processed_transcript MGP_BALBcJ_T0034471.1 MGP_BALBcJ_G0019573.1 mouse_genomes_project 12 21914733 21960150 + MGP_BALBcJ_P0034471 Grhl1 protein_coding protein_coding MGP_BALBcJ_T0034472.1 MGP_BALBcJ_G0019573.1 mouse_genomes_project 12 21923496 21960154 + MGP_BALBcJ_P0034472 Grhl1 protein_coding protein_coding MGP_BALBcJ_T0009822.1 MGP_BALBcJ_G0007947.1 mouse_genomes_project 12 108007805 108007901 + Mir341 miRNA miRNA MGP_BALBcJ_T0003399.1 MGP_BALBcJ_G0003121.1 mouse_genomes_project 12 100100265 100102365 - Gm16339 antisense antisense MGP_BALBcJ_T0034537.1 MGP_BALBcJ_G0019599.1 mouse_genomes_project 12 28270038 28317650 + Sh3yl1 protein_coding retained_intron MGP_BALBcJ_T0034538.1 MGP_BALBcJ_G0019599.1 mouse_genomes_project 12 28270038 28317794 + MGP_BALBcJ_P0034538 Sh3yl1 protein_coding protein_coding MGP_BALBcJ_T0034539.1 MGP_BALBcJ_G0019599.1 mouse_genomes_project 12 28270062 28317783 + MGP_BALBcJ_P0034539 Sh3yl1 protein_coding protein_coding MGP_BALBcJ_T0034540.1 MGP_BALBcJ_G0019599.1 mouse_genomes_project 12 28270557 28317788 + Sh3yl1 protein_coding processed_transcript MGP_BALBcJ_T0034436.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14436429 14476092 - MGP_BALBcJ_P0034436 Atp6v1c2 protein_coding protein_coding MGP_BALBcJ_T0034437.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14436430 14476083 - MGP_BALBcJ_P0034437 Atp6v1c2 protein_coding protein_coding MGP_BALBcJ_T0034438.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14436430 14476045 - MGP_BALBcJ_P0034438 Atp6v1c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034439.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14436431 14460060 - MGP_BALBcJ_P0034439 Atp6v1c2 protein_coding protein_coding MGP_BALBcJ_T0034440.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14436567 14476071 - MGP_BALBcJ_P0034440 Atp6v1c2 protein_coding unknown_likely_coding MGP_BALBcJ_T0034441.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14449460 14480654 - MGP_BALBcJ_P0034441 Atp6v1c2 protein_coding protein_coding MGP_BALBcJ_T0034442.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14459947 14476110 - MGP_BALBcJ_P0034442 Atp6v1c2 protein_coding protein_coding MGP_BALBcJ_T0034443.1 MGP_BALBcJ_G0019561.1 mouse_genomes_project 12 14459991 14480665 - MGP_BALBcJ_P0034443 Atp6v1c2 protein_coding protein_coding MGP_BALBcJ_T0006458.1 MGP_BALBcJ_G0005376.1 mouse_genomes_project 12 108036602 108038613 + Gm26945 lincRNA lincRNA MGP_BALBcJ_T0003406.1 MGP_BALBcJ_G0003127.1 mouse_genomes_project 12 109075267 109075784 - Gm17111 antisense antisense MGP_BALBcJ_T0036082.1 MGP_BALBcJ_G0020121.1 mouse_genomes_project 12 115341921 115405254 + MGP_BALBcJ_P0036082 Ncapg2 protein_coding protein_coding MGP_BALBcJ_T0000099.1 MGP_BALBcJ_G0000076.1 mouse_genomes_project 12 113236028 113236462 - MGP_BALBcJ_P0000099 Ighv1-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0006391.1 MGP_BALBcJ_G0005327.1 mouse_genomes_project 12 56413439 56430056 + Gm17529 lincRNA lincRNA MGP_BALBcJ_T0035785.1 MGP_BALBcJ_G0020026.1 mouse_genomes_project 12 103421760 103427706 + MGP_BALBcJ_P0035785 Tcl1b5 protein_coding protein_coding MGP_BALBcJ_T0034506.1 MGP_BALBcJ_G0019587.1 mouse_genomes_project 12 26005424 26010531 - MGP_BALBcJ_P0034506 Rps7 protein_coding protein_coding MGP_BALBcJ_T0000852.1 MGP_BALBcJ_G0000784.1 mouse_genomes_project 12 54999181 55003730 + TEC TEC MGP_BALBcJ_T0035885.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109011553 109077321 + MGP_BALBcJ_P0035885 Dync1h1 protein_coding protein_coding MGP_BALBcJ_T0035886.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109050445 109051458 + Dync1h1 protein_coding retained_intron MGP_BALBcJ_T0035887.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109064212 109068218 + MGP_BALBcJ_P0035887 Dync1h1 protein_coding protein_coding MGP_BALBcJ_T0035888.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109066455 109067394 + Dync1h1 protein_coding retained_intron MGP_BALBcJ_T0035889.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109069142 109069880 + Dync1h1 protein_coding retained_intron MGP_BALBcJ_T0035890.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109071036 109071846 + Dync1h1 protein_coding retained_intron MGP_BALBcJ_T0035891.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109071309 109071877 + Dync1h1 protein_coding retained_intron MGP_BALBcJ_T0035892.1 MGP_BALBcJ_G0020058.1 mouse_genomes_project 12 109073564 109075250 + Dync1h1 protein_coding retained_intron MGP_BALBcJ_T0034714.1 MGP_BALBcJ_G0019662.1 mouse_genomes_project 12 48652200 48681124 + MGP_BALBcJ_P0034714 G2e3 protein_coding protein_coding MGP_BALBcJ_T0034715.1 MGP_BALBcJ_G0019662.1 mouse_genomes_project 12 48652427 48677405 + MGP_BALBcJ_P0034715 G2e3 protein_coding protein_coding MGP_BALBcJ_T0034716.1 MGP_BALBcJ_G0019662.1 mouse_genomes_project 12 48652511 48677508 + MGP_BALBcJ_P0034716 G2e3 protein_coding protein_coding MGP_BALBcJ_T0034717.1 MGP_BALBcJ_G0019662.1 mouse_genomes_project 12 48661288 48667671 + G2e3 protein_coding retained_intron MGP_BALBcJ_T0034718.1 MGP_BALBcJ_G0019662.1 mouse_genomes_project 12 48674812 48678215 + G2e3 protein_coding retained_intron MGP_BALBcJ_T0034609.1 MGP_BALBcJ_G0019619.1 mouse_genomes_project 12 30742299 30748793 + MGP_BALBcJ_P0034609 Efcab10 protein_coding protein_coding MGP_BALBcJ_T0035338.1 MGP_BALBcJ_G0019875.1 mouse_genomes_project 12 82247749 82267965 - MGP_BALBcJ_P0035338 Aldh6a1 protein_coding protein_coding MGP_BALBcJ_T0006438.1 MGP_BALBcJ_G0005366.1 mouse_genomes_project 12 105453809 105456715 + Gm16085 lincRNA lincRNA MGP_BALBcJ_T0034756.1 MGP_BALBcJ_G0019681.1 mouse_genomes_project 12 52329257 52329629 - MGP_BALBcJ_P0034756 Gm20403 protein_coding protein_coding MGP_BALBcJ_T0003365.1 MGP_BALBcJ_G0003092.1 mouse_genomes_project 12 764221 767173 - Dnmt3aos antisense antisense MGP_BALBcJ_T0009866.1 MGP_BALBcJ_G0007991.1 mouse_genomes_project 12 108139815 108139895 - Gm24321 miRNA miRNA MGP_BALBcJ_T0035432.1 MGP_BALBcJ_G0019905.1 mouse_genomes_project 12 83933454 84016221 + MGP_BALBcJ_P0035432 Ift43 protein_coding unknown_likely_coding MGP_BALBcJ_T0035433.1 MGP_BALBcJ_G0019905.1 mouse_genomes_project 12 83933461 84016214 + MGP_BALBcJ_P0035433 Ift43 protein_coding protein_coding MGP_BALBcJ_T0034341.1 MGP_BALBcJ_G0019525.1 mouse_genomes_project 12 5269271 5273292 - MGP_BALBcJ_P0034341 Gdf7 protein_coding protein_coding MGP_BALBcJ_T0012799.1 MGP_BALBcJ_G0010896.1 mouse_genomes_project 12 66708709 66709346 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034731.1 MGP_BALBcJ_G0019670.1 mouse_genomes_project 12 49337762 49342997 - MGP_BALBcJ_P0034731 Gpr33 protein_coding protein_coding MGP_BALBcJ_T0006457.1 MGP_BALBcJ_G0005375.1 mouse_genomes_project 12 107965187 107968283 - Gm26906 lincRNA lincRNA MGP_BALBcJ_T0003391.1 MGP_BALBcJ_G0003114.1 mouse_genomes_project 12 80845015 80883929 - Gm29530 antisense antisense MGP_BALBcJ_T0035477.1 MGP_BALBcJ_G0019920.1 mouse_genomes_project 12 85122605 85150298 - MGP_BALBcJ_P0035477 Vipas39 protein_coding protein_coding MGP_BALBcJ_T0035478.1 MGP_BALBcJ_G0019920.1 mouse_genomes_project 12 85122605 85148256 - MGP_BALBcJ_P0035478 Vipas39 protein_coding protein_coding MGP_BALBcJ_T0035479.1 MGP_BALBcJ_G0019920.1 mouse_genomes_project 12 85122605 85150298 - MGP_BALBcJ_P0035479 Vipas39 protein_coding protein_coding MGP_BALBcJ_T0034534.1 MGP_BALBcJ_G0019597.1 mouse_genomes_project 12 28240383 28250052 + MGP_BALBcJ_P0034534 Fam150b protein_coding protein_coding MGP_BALBcJ_T0099349.1 MGP_BALBcJ_G0037385.1 mouse_genomes_project 12 98759925 98760031 - Gm25801 snRNA snRNA MGP_BALBcJ_T0034419.1 MGP_BALBcJ_G0019556.1 mouse_genomes_project 12 14047157 14139974 + MGP_BALBcJ_P0034419 Rock2 protein_coding protein_coding MGP_BALBcJ_T0035212.1 MGP_BALBcJ_G0019847.1 mouse_genomes_project 12 80269331 80270755 - MGP_BALBcJ_P0035212 Gm5435 protein_coding protein_coding MGP_BALBcJ_T0000859.1 MGP_BALBcJ_G0000791.1 mouse_genomes_project 12 83920087 83920694 + TEC TEC MGP_BALBcJ_T0034615.1 MGP_BALBcJ_G0019624.1 mouse_genomes_project 12 31700391 31858254 - MGP_BALBcJ_P0034615 Hdac9 protein_coding unknown_likely_coding MGP_BALBcJ_T0034616.1 MGP_BALBcJ_G0019624.1 mouse_genomes_project 12 31700404 31858360 - MGP_BALBcJ_P0034616 Hdac9 protein_coding protein_coding MGP_BALBcJ_T0035017.1 MGP_BALBcJ_G0019774.1 mouse_genomes_project 12 70925871 70989555 + MGP_BALBcJ_P0035017 Slc38a6 protein_coding protein_coding MGP_BALBcJ_T0035018.1 MGP_BALBcJ_G0019774.1 mouse_genomes_project 12 70925882 70955118 + MGP_BALBcJ_P0035018 Slc38a6 protein_coding protein_coding MGP_BALBcJ_T0035019.1 MGP_BALBcJ_G0019774.1 mouse_genomes_project 12 70926000 70955107 + MGP_BALBcJ_P0035019 Slc38a6 protein_coding protein_coding MGP_BALBcJ_T0035020.1 MGP_BALBcJ_G0019774.1 mouse_genomes_project 12 70954730 70975955 + Slc38a6 protein_coding retained_intron MGP_BALBcJ_T0035021.1 MGP_BALBcJ_G0019774.1 mouse_genomes_project 12 70980337 70987382 + Slc38a6 protein_coding retained_intron MGP_BALBcJ_T0012771.1 MGP_BALBcJ_G0010868.1 mouse_genomes_project 12 837820 838339 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034385.1 MGP_BALBcJ_G0019539.1 mouse_genomes_project 12 8280945 8281512 - MGP_BALBcJ_P0034385 Msgn1 protein_coding protein_coding MGP_BALBcJ_T0100589.1 MGP_BALBcJ_G0038625.1 mouse_genomes_project 12 75836660 75836781 + Gm24994 snoRNA snoRNA MGP_BALBcJ_T0034535.1 MGP_BALBcJ_G0019598.1 mouse_genomes_project 12 28249523 28269983 - MGP_BALBcJ_P0034535 Acp1 protein_coding protein_coding MGP_BALBcJ_T0034536.1 MGP_BALBcJ_G0019598.1 mouse_genomes_project 12 28252386 28269903 - MGP_BALBcJ_P0034536 Acp1 protein_coding protein_coding MGP_BALBcJ_T0034489.1 MGP_BALBcJ_G0019577.1 mouse_genomes_project 12 22167976 22299336 + MGP_BALBcJ_P0034489 Mboat2 protein_coding protein_coding MGP_BALBcJ_T0034490.1 MGP_BALBcJ_G0019577.1 mouse_genomes_project 12 22167976 22299336 + MGP_BALBcJ_P0034490 Mboat2 protein_coding protein_coding MGP_BALBcJ_T0011304.1 MGP_BALBcJ_G0009429.1 mouse_genomes_project 12 59371219 59371532 + Gm23213 misc_RNA misc_RNA MGP_BALBcJ_T0017270.1 MGP_BALBcJ_G0015173.1 mouse_genomes_project 12 98177585 98183193 + Gm10433 processed_transcript processed_transcript MGP_BALBcJ_T0017271.1 MGP_BALBcJ_G0015173.1 mouse_genomes_project 12 98178390 98182398 + Gm10433 processed_transcript processed_transcript MGP_BALBcJ_T0000022.1 MGP_BALBcJ_G0000016.1 mouse_genomes_project 12 111814965 111817132 + IG_C_pseudogene IG_C_pseudogene MGP_BALBcJ_T0034746.1 MGP_BALBcJ_G0019678.1 mouse_genomes_project 12 52087857 52128838 - MGP_BALBcJ_P0034746 Snx6 protein_coding protein_coding MGP_BALBcJ_T0035931.1 MGP_BALBcJ_G0020072.1 mouse_genomes_project 12 109832089 109837813 + MGP_BALBcJ_P0035931 A230065H16Rik protein_coding protein_coding MGP_BALBcJ_T0006423.1 MGP_BALBcJ_G0005355.1 mouse_genomes_project 12 99075252 99081490 + D130020L05Rik lincRNA lincRNA MGP_BALBcJ_T0006399.1 MGP_BALBcJ_G0005333.1 mouse_genomes_project 12 75868172 75880322 + lincRNA lincRNA MGP_BALBcJ_T0006400.1 MGP_BALBcJ_G0005333.1 mouse_genomes_project 12 75869661 75872036 + lincRNA lincRNA MGP_BALBcJ_T0006401.1 MGP_BALBcJ_G0005333.1 mouse_genomes_project 12 75871956 75880421 + lincRNA lincRNA MGP_BALBcJ_T0036030.1 MGP_BALBcJ_G0020107.1 mouse_genomes_project 12 111441647 111483443 - MGP_BALBcJ_P0036030 Brf1 protein_coding protein_coding MGP_BALBcJ_T0100593.1 MGP_BALBcJ_G0038629.1 mouse_genomes_project 12 80547822 80547958 - Gm22149 snoRNA snoRNA MGP_BALBcJ_T0035710.1 MGP_BALBcJ_G0019989.1 mouse_genomes_project 12 101385279 101402934 + MGP_BALBcJ_P0035710 Otub2 protein_coding protein_coding MGP_BALBcJ_T0035711.1 MGP_BALBcJ_G0019989.1 mouse_genomes_project 12 101385295 101402940 + MGP_BALBcJ_P0035711 Otub2 protein_coding protein_coding MGP_BALBcJ_T0035712.1 MGP_BALBcJ_G0019989.1 mouse_genomes_project 12 101385363 101402940 + Otub2 protein_coding retained_intron MGP_BALBcJ_T0035713.1 MGP_BALBcJ_G0019989.1 mouse_genomes_project 12 101385582 101399496 + MGP_BALBcJ_P0035713 Otub2 protein_coding protein_coding MGP_BALBcJ_T0035714.1 MGP_BALBcJ_G0019989.1 mouse_genomes_project 12 101389247 101402945 + MGP_BALBcJ_P0035714 Otub2 protein_coding protein_coding MGP_BALBcJ_T0009795.1 MGP_BALBcJ_G0007920.1 mouse_genomes_project 12 97968259 97968337 - Gm23291 miRNA miRNA MGP_BALBcJ_T0034740.1 MGP_BALBcJ_G0019675.1 mouse_genomes_project 12 51490261 51518699 - MGP_BALBcJ_P0034740 Egln3 protein_coding protein_coding MGP_BALBcJ_T0000061.1 MGP_BALBcJ_G0000047.1 mouse_genomes_project 12 112370618 112371089 - MGP_BALBcJ_P0000061 Ighv5-15 IG_V_gene IG_V_gene MGP_BALBcJ_T0000062.1 MGP_BALBcJ_G0000047.1 mouse_genomes_project 12 112370618 112371097 - MGP_BALBcJ_P0000062 Ighv5-15 IG_V_gene IG_V_gene MGP_BALBcJ_T0006402.1 MGP_BALBcJ_G0005334.1 mouse_genomes_project 12 77793606 77798915 + Gm26669 lincRNA lincRNA MGP_BALBcJ_T0035754.1 MGP_BALBcJ_G0020004.1 mouse_genomes_project 12 102049031 102068647 - MGP_BALBcJ_P0035754 Serpina9 protein_coding protein_coding MGP_BALBcJ_T0035755.1 MGP_BALBcJ_G0020004.1 mouse_genomes_project 12 102063330 102068750 - MGP_BALBcJ_P0035755 Serpina9 protein_coding protein_coding MGP_BALBcJ_T0036081.1 MGP_BALBcJ_G0020120.1 mouse_genomes_project 12 115216206 115307064 + MGP_BALBcJ_P0036081 Esyt2 protein_coding protein_coding MGP_BALBcJ_T0035879.1 MGP_BALBcJ_G0020055.1 mouse_genomes_project 12 107985756 107996648 - MGP_BALBcJ_P0035879 Rtl1 protein_coding protein_coding MGP_BALBcJ_T0006444.1 MGP_BALBcJ_G0005371.1 mouse_genomes_project 12 106655088 106669878 - 4930478K11Rik lincRNA lincRNA MGP_BALBcJ_T0034769.1 MGP_BALBcJ_G0019687.1 mouse_genomes_project 12 52836724 52871428 + MGP_BALBcJ_P0034769 Psma6 protein_coding protein_coding MGP_BALBcJ_T0034770.1 MGP_BALBcJ_G0019687.1 mouse_genomes_project 12 52851990 52871572 + MGP_BALBcJ_P0034770 Psma6 protein_coding protein_coding MGP_BALBcJ_T0034771.1 MGP_BALBcJ_G0019687.1 mouse_genomes_project 12 52852010 52871559 + MGP_BALBcJ_P0034771 Psma6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034772.1 MGP_BALBcJ_G0019687.1 mouse_genomes_project 12 52860728 52865401 + Psma6 protein_coding processed_transcript MGP_BALBcJ_T0099330.1 MGP_BALBcJ_G0037366.1 mouse_genomes_project 12 59431156 59431260 + Gm24750 snRNA snRNA MGP_BALBcJ_T0035620.1 MGP_BALBcJ_G0019960.1 mouse_genomes_project 12 98536503 98713811 - MGP_BALBcJ_P0035620 Rps6ka5 protein_coding unknown_likely_coding MGP_BALBcJ_T0035621.1 MGP_BALBcJ_G0019960.1 mouse_genomes_project 12 98537846 98713959 - MGP_BALBcJ_P0035621 Rps6ka5 protein_coding protein_coding MGP_BALBcJ_T0035144.1 MGP_BALBcJ_G0019823.1 mouse_genomes_project 12 77853451 77947793 - MGP_BALBcJ_P0035144 Actn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0035145.1 MGP_BALBcJ_G0019823.1 mouse_genomes_project 12 77853453 77948073 - MGP_BALBcJ_P0035145 Actn1 protein_coding protein_coding MGP_BALBcJ_T0035146.1 MGP_BALBcJ_G0019823.1 mouse_genomes_project 12 77854233 77947793 - MGP_BALBcJ_P0035146 Actn1 protein_coding protein_coding MGP_BALBcJ_T0000058.1 MGP_BALBcJ_G0000045.1 mouse_genomes_project 12 112111273 112111760 - MGP_BALBcJ_P0000058 Ighv5-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0000059.1 MGP_BALBcJ_G0000045.1 mouse_genomes_project 12 112111273 112111760 - MGP_BALBcJ_P0000059 Ighv5-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0012804.1 MGP_BALBcJ_G0010901.1 mouse_genomes_project 12 76842376 76842804 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012816.1 MGP_BALBcJ_G0010913.1 mouse_genomes_project 12 89817041 89817419 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012798.1 MGP_BALBcJ_G0010895.1 mouse_genomes_project 12 60589855 60590152 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034877.1 MGP_BALBcJ_G0019725.1 mouse_genomes_project 12 66756316 66757572 - MGP_BALBcJ_P0034877 Rpl36al protein_coding protein_coding MGP_BALBcJ_T0034878.1 MGP_BALBcJ_G0019725.1 mouse_genomes_project 12 66756323 66757599 - MGP_BALBcJ_P0034878 Rpl36al protein_coding protein_coding MGP_BALBcJ_T0034879.1 MGP_BALBcJ_G0019725.1 mouse_genomes_project 12 66756326 66757669 - MGP_BALBcJ_P0034879 Rpl36al protein_coding protein_coding MGP_BALBcJ_T0035153.1 MGP_BALBcJ_G0019829.1 mouse_genomes_project 12 78387164 78419121 + MGP_BALBcJ_P0035153 Plekhd1 protein_coding protein_coding MGP_BALBcJ_T0035154.1 MGP_BALBcJ_G0019829.1 mouse_genomes_project 12 78401760 78415592 + Plekhd1 protein_coding processed_transcript MGP_BALBcJ_T0035155.1 MGP_BALBcJ_G0019829.1 mouse_genomes_project 12 78415664 78416914 + MGP_BALBcJ_P0035155 Plekhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035156.1 MGP_BALBcJ_G0019829.1 mouse_genomes_project 12 78416638 78417817 + Plekhd1 protein_coding retained_intron MGP_BALBcJ_T0035962.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110206516 110254449 + MGP_BALBcJ_P0035962 Klc1 protein_coding protein_coding MGP_BALBcJ_T0035963.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110206623 110242541 + MGP_BALBcJ_P0035963 Klc1 protein_coding protein_coding MGP_BALBcJ_T0035964.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110206680 110254401 + MGP_BALBcJ_P0035964 Klc1 protein_coding protein_coding MGP_BALBcJ_T0035965.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110219951 110242539 + MGP_BALBcJ_P0035965 Klc1 protein_coding protein_coding MGP_BALBcJ_T0035966.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110229522 110255518 + MGP_BALBcJ_P0035966 Klc1 protein_coding protein_coding MGP_BALBcJ_T0035967.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110232912 110235426 + Klc1 protein_coding retained_intron MGP_BALBcJ_T0035968.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110236965 110242042 + Klc1 protein_coding processed_transcript MGP_BALBcJ_T0035969.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110242995 110254400 + Klc1 protein_coding retained_intron MGP_BALBcJ_T0035975.1 MGP_BALBcJ_G0020082.1 mouse_genomes_project 12 110253177 110254385 + Klc1 protein_coding retained_intron MGP_BALBcJ_T0035880.1 MGP_BALBcJ_G0020056.1 mouse_genomes_project 12 108683645 108685675 + MGP_BALBcJ_P0035880 protein_coding protein_coding MGP_BALBcJ_T0035881.1 MGP_BALBcJ_G0020056.1 mouse_genomes_project 12 108683837 108685286 + MGP_BALBcJ_P0035881 protein_coding protein_coding MGP_BALBcJ_T0034779.1 MGP_BALBcJ_G0019693.1 mouse_genomes_project 12 53769969 53787517 - MGP_BALBcJ_P0034779 Mbip protein_coding protein_coding MGP_BALBcJ_T0000094.1 MGP_BALBcJ_G0000071.1 mouse_genomes_project 12 113143533 113143990 - MGP_BALBcJ_P0000094 IG_V_gene IG_V_gene MGP_BALBcJ_T0035010.1 MGP_BALBcJ_G0019771.1 mouse_genomes_project 12 70733919 70747763 - MGP_BALBcJ_P0035010 Six4 protein_coding protein_coding MGP_BALBcJ_T0035011.1 MGP_BALBcJ_G0019771.1 mouse_genomes_project 12 70737749 70747794 - MGP_BALBcJ_P0035011 Six4 protein_coding protein_coding MGP_BALBcJ_T0034790.1 MGP_BALBcJ_G0019698.1 mouse_genomes_project 12 54686141 54696090 + MGP_BALBcJ_P0034790 Prps1l3 protein_coding protein_coding MGP_BALBcJ_T0035600.1 MGP_BALBcJ_G0019953.1 mouse_genomes_project 12 97708859 97868574 - MGP_BALBcJ_P0035600 Efcab11 protein_coding protein_coding MGP_BALBcJ_T0100562.1 MGP_BALBcJ_G0038598.1 mouse_genomes_project 12 25711238 25711370 + Gm25564 snoRNA snoRNA MGP_BALBcJ_T0035911.1 MGP_BALBcJ_G0020063.1 mouse_genomes_project 12 109267523 109288258 + MGP_BALBcJ_P0035911 Zfp839 protein_coding protein_coding MGP_BALBcJ_T0035749.1 MGP_BALBcJ_G0020003.1 mouse_genomes_project 12 102033944 102043632 - MGP_BALBcJ_P0035749 Serpina11 protein_coding protein_coding MGP_BALBcJ_T0035750.1 MGP_BALBcJ_G0020003.1 mouse_genomes_project 12 102033956 102043602 - MGP_BALBcJ_P0035750 Serpina11 protein_coding protein_coding MGP_BALBcJ_T0035751.1 MGP_BALBcJ_G0020003.1 mouse_genomes_project 12 102038358 102043594 - MGP_BALBcJ_P0035751 Serpina11 protein_coding protein_coding MGP_BALBcJ_T0035752.1 MGP_BALBcJ_G0020003.1 mouse_genomes_project 12 102038444 102043592 - MGP_BALBcJ_P0035752 Serpina11 protein_coding protein_coding MGP_BALBcJ_T0035753.1 MGP_BALBcJ_G0020003.1 mouse_genomes_project 12 102039583 102043616 - Serpina11 protein_coding processed_transcript MGP_BALBcJ_T0034523.1 MGP_BALBcJ_G0019594.1 mouse_genomes_project 12 27430686 27499309 - MGP_BALBcJ_P0034523 Tpo protein_coding protein_coding MGP_BALBcJ_T0034524.1 MGP_BALBcJ_G0019594.1 mouse_genomes_project 12 27459386 27462244 - Tpo protein_coding retained_intron MGP_BALBcJ_T0034525.1 MGP_BALBcJ_G0019594.1 mouse_genomes_project 12 27483383 27498581 - MGP_BALBcJ_P0034525 Tpo protein_coding protein_coding MGP_BALBcJ_T0034491.1 MGP_BALBcJ_G0019578.1 mouse_genomes_project 12 22314354 22399221 + MGP_BALBcJ_P0034491 Kidins220 protein_coding protein_coding MGP_BALBcJ_T0034492.1 MGP_BALBcJ_G0019578.1 mouse_genomes_project 12 22314358 22402664 + MGP_BALBcJ_P0034492 Kidins220 protein_coding unknown_likely_coding MGP_BALBcJ_T0009808.1 MGP_BALBcJ_G0007933.1 mouse_genomes_project 12 107976792 107976875 + Mir493 miRNA miRNA MGP_BALBcJ_T0009774.1 MGP_BALBcJ_G0007899.1 mouse_genomes_project 12 66732563 66732643 + miRNA miRNA MGP_BALBcJ_T0035735.1 MGP_BALBcJ_G0019996.1 mouse_genomes_project 12 101642052 101652666 - MGP_BALBcJ_P0035735 Serpina6 protein_coding protein_coding MGP_BALBcJ_T0035736.1 MGP_BALBcJ_G0019996.1 mouse_genomes_project 12 101649826 101652556 - MGP_BALBcJ_P0035736 Serpina6 protein_coding protein_coding MGP_BALBcJ_T0035706.1 MGP_BALBcJ_G0019988.1 mouse_genomes_project 12 101317852 101352686 - MGP_BALBcJ_P0035706 Asb2 protein_coding protein_coding MGP_BALBcJ_T0035707.1 MGP_BALBcJ_G0019988.1 mouse_genomes_project 12 101317856 101332301 - Asb2 protein_coding retained_intron MGP_BALBcJ_T0035708.1 MGP_BALBcJ_G0019988.1 mouse_genomes_project 12 101317856 101335090 - MGP_BALBcJ_P0035708 Asb2 protein_coding protein_coding MGP_BALBcJ_T0035709.1 MGP_BALBcJ_G0019988.1 mouse_genomes_project 12 101331585 101333451 - Asb2 protein_coding processed_transcript MGP_BALBcJ_T0034500.1 MGP_BALBcJ_G0019583.1 mouse_genomes_project 12 24695241 24704573 - MGP_BALBcJ_P0034500 Sox11 protein_coding protein_coding MGP_BALBcJ_T0017272.1 MGP_BALBcJ_G0015174.1 mouse_genomes_project 12 99885666 99887760 + Gm20036 processed_transcript processed_transcript MGP_BALBcJ_T0034780.1 MGP_BALBcJ_G0019694.1 mouse_genomes_project 12 53975999 53979136 - MGP_BALBcJ_P0034780 Nkx2-1 protein_coding protein_coding MGP_BALBcJ_T0034781.1 MGP_BALBcJ_G0019694.1 mouse_genomes_project 12 53975999 53984186 - MGP_BALBcJ_P0034781 Nkx2-1 protein_coding protein_coding MGP_BALBcJ_T0003407.1 MGP_BALBcJ_G0003128.1 mouse_genomes_project 12 116139984 116242109 - Gm5441 antisense antisense MGP_BALBcJ_T0003408.1 MGP_BALBcJ_G0003128.1 mouse_genomes_project 12 116185098 116242119 - Gm5441 antisense antisense MGP_BALBcJ_T0009773.1 MGP_BALBcJ_G0007898.1 mouse_genomes_project 12 66732482 66732552 + miRNA miRNA MGP_BALBcJ_T0009767.1 MGP_BALBcJ_G0007892.1 mouse_genomes_project 12 34363884 34363985 - Gm44326 miRNA miRNA MGP_BALBcJ_T0034582.1 MGP_BALBcJ_G0019613.1 mouse_genomes_project 12 29527294 29562965 - MGP_BALBcJ_P0034582 Pik3cg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034583.1 MGP_BALBcJ_G0019613.1 mouse_genomes_project 12 29527993 29563013 - MGP_BALBcJ_P0034583 Pik3cg protein_coding protein_coding MGP_BALBcJ_T0034584.1 MGP_BALBcJ_G0019613.1 mouse_genomes_project 12 29529448 29562828 - MGP_BALBcJ_P0034584 Pik3cg protein_coding protein_coding MGP_BALBcJ_T0034585.1 MGP_BALBcJ_G0019613.1 mouse_genomes_project 12 29554912 29555371 - Pik3cg protein_coding retained_intron MGP_BALBcJ_T0100619.1 MGP_BALBcJ_G0038655.1 mouse_genomes_project 12 108079370 108079445 + Gm25856 snoRNA snoRNA MGP_BALBcJ_T0102180.1 MGP_BALBcJ_G0039996.1 mouse_genomes_project 12 102136872 102142905 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0009858.1 MGP_BALBcJ_G0007983.1 mouse_genomes_project 12 108131399 108131465 + Mir668 miRNA miRNA MGP_BALBcJ_T0006360.1 MGP_BALBcJ_G0005304.1 mouse_genomes_project 12 2310537 2352019 + 2810032G03Rik lincRNA lincRNA MGP_BALBcJ_T0006361.1 MGP_BALBcJ_G0005304.1 mouse_genomes_project 12 2347274 2352345 + 2810032G03Rik lincRNA lincRNA MGP_BALBcJ_T0035608.1 MGP_BALBcJ_G0019955.1 mouse_genomes_project 12 97950170 98050454 + MGP_BALBcJ_P0035608 Kcnk13 protein_coding protein_coding MGP_BALBcJ_T0035609.1 MGP_BALBcJ_G0019955.1 mouse_genomes_project 12 97950170 98050454 + MGP_BALBcJ_P0035609 Kcnk13 protein_coding protein_coding MGP_BALBcJ_T0035610.1 MGP_BALBcJ_G0019955.1 mouse_genomes_project 12 97950176 97951952 + MGP_BALBcJ_P0035610 Kcnk13 protein_coding protein_coding MGP_BALBcJ_T0035611.1 MGP_BALBcJ_G0019955.1 mouse_genomes_project 12 97950196 98050446 + MGP_BALBcJ_P0035611 Kcnk13 protein_coding protein_coding MGP_BALBcJ_T0034335.1 MGP_BALBcJ_G0019522.1 mouse_genomes_project 12 2012962 2310350 - MGP_BALBcJ_P0034335 Klhl29 protein_coding protein_coding MGP_BALBcJ_T0035788.1 MGP_BALBcJ_G0020029.1 mouse_genomes_project 12 103493324 103499313 - MGP_BALBcJ_P0035788 Tcl1 protein_coding protein_coding MGP_BALBcJ_T0035789.1 MGP_BALBcJ_G0020029.1 mouse_genomes_project 12 103493332 103499292 - MGP_BALBcJ_P0035789 Tcl1 protein_coding protein_coding MGP_BALBcJ_T0035790.1 MGP_BALBcJ_G0020029.1 mouse_genomes_project 12 103493882 103499282 - MGP_BALBcJ_P0035790 Tcl1 protein_coding protein_coding MGP_BALBcJ_T0035791.1 MGP_BALBcJ_G0020029.1 mouse_genomes_project 12 103494072 103499369 - MGP_BALBcJ_P0035791 Tcl1 protein_coding protein_coding MGP_BALBcJ_T0035792.1 MGP_BALBcJ_G0020029.1 mouse_genomes_project 12 103494168 103499272 - MGP_BALBcJ_P0035792 Tcl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035793.1 MGP_BALBcJ_G0020029.1 mouse_genomes_project 12 103494864 103499201 - Tcl1 protein_coding processed_transcript MGP_BALBcJ_T0034632.1 MGP_BALBcJ_G0019633.1 mouse_genomes_project 12 33437315 33499832 - MGP_BALBcJ_P0034632 Bzw2 protein_coding unknown_likely_coding MGP_BALBcJ_T0034646.1 MGP_BALBcJ_G0019641.1 mouse_genomes_project 12 35227507 35989984 + MGP_BALBcJ_P0034646 Dgkb protein_coding protein_coding MGP_BALBcJ_T0034647.1 MGP_BALBcJ_G0019641.1 mouse_genomes_project 12 35331194 35987263 + MGP_BALBcJ_P0034647 Dgkb protein_coding unknown_likely_coding MGP_BALBcJ_T0006428.1 MGP_BALBcJ_G0005359.1 mouse_genomes_project 12 104640537 104643979 + Gm17032 lincRNA lincRNA MGP_BALBcJ_T0009778.1 MGP_BALBcJ_G0007903.1 mouse_genomes_project 12 67349968 67350078 - Mir681 miRNA miRNA MGP_BALBcJ_T0035042.1 MGP_BALBcJ_G0019786.1 mouse_genomes_project 12 73290285 73329739 - MGP_BALBcJ_P0035042 Wdr89 protein_coding protein_coding MGP_BALBcJ_T0035043.1 MGP_BALBcJ_G0019786.1 mouse_genomes_project 12 73291090 73329729 - MGP_BALBcJ_P0035043 Wdr89 protein_coding protein_coding MGP_BALBcJ_T0035376.1 MGP_BALBcJ_G0019888.1 mouse_genomes_project 12 82923244 82933951 - MGP_BALBcJ_P0035376 Prox2 protein_coding protein_coding MGP_BALBcJ_T0035377.1 MGP_BALBcJ_G0019888.1 mouse_genomes_project 12 82923673 82943301 - MGP_BALBcJ_P0035377 Prox2 protein_coding protein_coding MGP_BALBcJ_T0035378.1 MGP_BALBcJ_G0019888.1 mouse_genomes_project 12 82930892 82932485 - Prox2 protein_coding retained_intron MGP_BALBcJ_T0009817.1 MGP_BALBcJ_G0007942.1 mouse_genomes_project 12 107989327 107989397 + Mir127 miRNA miRNA MGP_BALBcJ_T0100583.1 MGP_BALBcJ_G0038619.1 mouse_genomes_project 12 62950508 62950633 - Gm26015 snoRNA snoRNA MGP_BALBcJ_T0006368.1 MGP_BALBcJ_G0005311.1 mouse_genomes_project 12 9994413 9998941 + 4930519A11Rik lincRNA lincRNA MGP_BALBcJ_T0099353.1 MGP_BALBcJ_G0037389.1 mouse_genomes_project 12 115419986 115420050 - Gm27649 snRNA snRNA MGP_BALBcJ_T0000848.1 MGP_BALBcJ_G0000780.1 mouse_genomes_project 12 9682208 9682741 + TEC TEC MGP_BALBcJ_T0100577.1 MGP_BALBcJ_G0038613.1 mouse_genomes_project 12 53999673 53999805 + Gm25760 snoRNA snoRNA MGP_BALBcJ_T0034712.1 MGP_BALBcJ_G0019661.1 mouse_genomes_project 12 47633621 47935484 - MGP_BALBcJ_P0034712 Prkd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0034713.1 MGP_BALBcJ_G0019661.1 mouse_genomes_project 12 47633630 47935734 - MGP_BALBcJ_P0034713 Prkd1 protein_coding protein_coding MGP_BALBcJ_T0012824.1 MGP_BALBcJ_G0010921.1 mouse_genomes_project 12 101636837 101637495 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017294.1 MGP_BALBcJ_G0015178.1 mouse_genomes_project 12 110174098 110174834 + Gm15995 processed_transcript processed_transcript MGP_BALBcJ_T0012794.1 MGP_BALBcJ_G0010891.1 mouse_genomes_project 12 56770870 56772088 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035948.1 MGP_BALBcJ_G0020077.1 mouse_genomes_project 12 110018073 110102171 + MGP_BALBcJ_P0035948 Mark3 protein_coding protein_coding MGP_BALBcJ_T0035949.1 MGP_BALBcJ_G0020077.1 mouse_genomes_project 12 110018073 110102171 + MGP_BALBcJ_P0035949 Mark3 protein_coding protein_coding MGP_BALBcJ_T0035088.1 MGP_BALBcJ_G0019801.1 mouse_genomes_project 12 74428885 74447546 + MGP_BALBcJ_P0035088 Churc1 protein_coding protein_coding MGP_BALBcJ_T0035089.1 MGP_BALBcJ_G0019801.1 mouse_genomes_project 12 74431773 74439178 + Churc1 protein_coding retained_intron MGP_BALBcJ_T0012810.1 MGP_BALBcJ_G0010907.1 mouse_genomes_project 12 81428987 81429375 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034722.1 MGP_BALBcJ_G0019665.1 mouse_genomes_project 12 48913742 49000429 - MGP_BALBcJ_P0034722 Strn3 protein_coding protein_coding MGP_BALBcJ_T0034723.1 MGP_BALBcJ_G0019665.1 mouse_genomes_project 12 48913742 49000429 - MGP_BALBcJ_P0034723 Strn3 protein_coding protein_coding MGP_BALBcJ_T0009835.1 MGP_BALBcJ_G0007960.1 mouse_genomes_project 12 108109490 108109571 + Mir758 miRNA miRNA MGP_BALBcJ_T0100595.1 MGP_BALBcJ_G0038631.1 mouse_genomes_project 12 88785076 88785205 + Gm23195 snoRNA snoRNA MGP_BALBcJ_T0000266.1 MGP_BALBcJ_G0000207.1 mouse_genomes_project 12 114859676 114859988 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0012784.1 MGP_BALBcJ_G0010881.1 mouse_genomes_project 12 48599782 48600204 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035140.1 MGP_BALBcJ_G0019821.1 mouse_genomes_project 12 76977215 77191988 + MGP_BALBcJ_P0035140 Rad51b protein_coding protein_coding MGP_BALBcJ_T0035141.1 MGP_BALBcJ_G0019821.1 mouse_genomes_project 12 76977215 77007163 + MGP_BALBcJ_P0035141 Rad51b protein_coding protein_coding MGP_BALBcJ_T0034367.1 MGP_BALBcJ_G0019531.1 mouse_genomes_project 12 5960397 5977250 + MGP_BALBcJ_P0034367 Laptm4a protein_coding protein_coding MGP_BALBcJ_T0011309.1 MGP_BALBcJ_G0009434.1 mouse_genomes_project 12 69331962 69332264 + Gm22959 misc_RNA misc_RNA MGP_BALBcJ_T0035348.1 MGP_BALBcJ_G0019882.1 mouse_genomes_project 12 82601963 82603783 + MGP_BALBcJ_P0035348 Isca2 protein_coding protein_coding MGP_BALBcJ_T0035799.1 MGP_BALBcJ_G0020033.1 mouse_genomes_project 12 103897433 103968640 - MGP_BALBcJ_P0035799 Atg2b protein_coding protein_coding MGP_BALBcJ_T0035800.1 MGP_BALBcJ_G0020033.1 mouse_genomes_project 12 103897438 103968229 - MGP_BALBcJ_P0035800 Atg2b protein_coding unknown_likely_coding MGP_BALBcJ_T0034776.1 MGP_BALBcJ_G0019691.1 mouse_genomes_project 12 53057215 53268735 - MGP_BALBcJ_P0034776 Ralgapa1 protein_coding protein_coding MGP_BALBcJ_T0034777.1 MGP_BALBcJ_G0019691.1 mouse_genomes_project 12 53066382 53268335 - MGP_BALBcJ_P0034777 Ralgapa1 protein_coding unknown_likely_coding MGP_BALBcJ_T0009768.1 MGP_BALBcJ_G0007893.1 mouse_genomes_project 12 37583534 37583634 - Mir1938 miRNA miRNA MGP_BALBcJ_T0012790.1 MGP_BALBcJ_G0010887.1 mouse_genomes_project 12 54728267 54728733 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034705.1 MGP_BALBcJ_G0019657.1 mouse_genomes_project 12 45107063 45107521 + MGP_BALBcJ_P0034705 protein_coding protein_coding MGP_BALBcJ_T0100585.1 MGP_BALBcJ_G0038621.1 mouse_genomes_project 12 63115070 63115202 + Gm22782 snoRNA snoRNA MGP_BALBcJ_T0034313.1 MGP_BALBcJ_G0019513.1 mouse_genomes_project 12 1635624 1660130 - MGP_BALBcJ_P0034313 Fam228a protein_coding protein_coding MGP_BALBcJ_T0009856.1 MGP_BALBcJ_G0007981.1 mouse_genomes_project 12 108130438 108130514 + Mir382 miRNA miRNA MGP_BALBcJ_T0006443.1 MGP_BALBcJ_G0005370.1 mouse_genomes_project 12 106075374 106115182 - Gm15208 lincRNA lincRNA MGP_BALBcJ_T0035469.1 MGP_BALBcJ_G0019916.1 mouse_genomes_project 12 85028414 85048073 + MGP_BALBcJ_P0035469 Gstz1 protein_coding protein_coding MGP_BALBcJ_T0035470.1 MGP_BALBcJ_G0019916.1 mouse_genomes_project 12 85041008 85047182 + MGP_BALBcJ_P0035470 Gstz1 protein_coding unknown_likely_coding MGP_BALBcJ_T0035181.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79052085 79182397 - MGP_BALBcJ_P0035181 Cox16 protein_coding protein_coding MGP_BALBcJ_T0035182.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79052227 79182360 - MGP_BALBcJ_P0035182 Cox16 protein_coding protein_coding MGP_BALBcJ_T0035186.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79167710 79182407 - MGP_BALBcJ_P0035186 Cox16 protein_coding protein_coding MGP_BALBcJ_T0035187.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79169099 79182116 - Cox16 protein_coding processed_transcript MGP_BALBcJ_T0035188.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79169099 79182400 - MGP_BALBcJ_P0035188 Cox16 protein_coding protein_coding MGP_BALBcJ_T0035189.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79169101 79182138 - Cox16 protein_coding processed_transcript MGP_BALBcJ_T0035190.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79171240 79182414 - Cox16 protein_coding processed_transcript MGP_BALBcJ_T0035191.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79171261 79182401 - MGP_BALBcJ_P0035191 Cox16 protein_coding protein_coding MGP_BALBcJ_T0035195.1 MGP_BALBcJ_G0019837.1 mouse_genomes_project 12 79177446 79182372 - Cox16 protein_coding retained_intron MGP_BALBcJ_T0000069.1 MGP_BALBcJ_G0000053.1 mouse_genomes_project 12 112553493 112553966 - MGP_BALBcJ_P0000069 IG_V_gene IG_V_gene MGP_BALBcJ_T0035636.1 MGP_BALBcJ_G0019963.1 mouse_genomes_project 12 98898955 99018647 - MGP_BALBcJ_P0035636 Ccdc88c protein_coding protein_coding MGP_BALBcJ_T0035637.1 MGP_BALBcJ_G0019963.1 mouse_genomes_project 12 98898955 99018647 - MGP_BALBcJ_P0035637 Ccdc88c protein_coding protein_coding MGP_BALBcJ_T0009785.1 MGP_BALBcJ_G0007910.1 mouse_genomes_project 12 78863525 78863609 + Mir3067 miRNA miRNA MGP_BALBcJ_T0034738.1 MGP_BALBcJ_G0019674.1 mouse_genomes_project 12 50545364 51381836 + MGP_BALBcJ_P0034738 Npas3 protein_coding protein_coding MGP_BALBcJ_T0034739.1 MGP_BALBcJ_G0019674.1 mouse_genomes_project 12 50545364 51381837 + MGP_BALBcJ_P0034739 Npas3 protein_coding unknown_likely_coding MGP_BALBcJ_T0000251.1 MGP_BALBcJ_G0000192.1 mouse_genomes_project 12 113259541 113259839 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0009771.1 MGP_BALBcJ_G0007896.1 mouse_genomes_project 12 53268630 53268721 - Gm23394 miRNA miRNA MGP_BALBcJ_T0009837.1 MGP_BALBcJ_G0007962.1 mouse_genomes_project 12 108111998 108112083 + Mir494 miRNA miRNA MGP_BALBcJ_T0036027.1 MGP_BALBcJ_G0020104.1 mouse_genomes_project 12 111329262 111339283 - MGP_BALBcJ_P0036027 Gpr132 protein_coding protein_coding MGP_BALBcJ_T0011306.1 MGP_BALBcJ_G0009431.1 mouse_genomes_project 12 66941320 66941630 - Rn7s2 misc_RNA misc_RNA MGP_BALBcJ_T0003388.1 MGP_BALBcJ_G0003111.1 mouse_genomes_project 12 79189473 79201581 + antisense antisense MGP_BALBcJ_T0035471.1 MGP_BALBcJ_G0019917.1 mouse_genomes_project 12 85049593 85083544 - MGP_BALBcJ_P0035471 Tmed8 protein_coding protein_coding MGP_BALBcJ_T0034418.1 MGP_BALBcJ_G0019555.1 mouse_genomes_project 12 13961001 13978216 + MGP_BALBcJ_P0034418 E2f6 protein_coding unknown_likely_coding MGP_BALBcJ_T0034473.1 MGP_BALBcJ_G0019574.1 mouse_genomes_project 12 21992845 22004326 + MGP_BALBcJ_P0034473 Klf11 protein_coding protein_coding MGP_BALBcJ_T0034474.1 MGP_BALBcJ_G0019574.1 mouse_genomes_project 12 21993370 21996597 + MGP_BALBcJ_P0034474 Klf11 protein_coding protein_coding MGP_BALBcJ_T0034475.1 MGP_BALBcJ_G0019574.1 mouse_genomes_project 12 21993370 21995268 + MGP_BALBcJ_P0034475 Klf11 protein_coding protein_coding MGP_BALBcJ_T0034476.1 MGP_BALBcJ_G0019574.1 mouse_genomes_project 12 21993627 21996592 + MGP_BALBcJ_P0034476 Klf11 protein_coding protein_coding MGP_BALBcJ_T0098486.1 MGP_BALBcJ_G0036540.1 mouse_genomes_project 12 88770842 88770959 + n-R5s65 rRNA rRNA MGP_BALBcJ_T0012773.1 MGP_BALBcJ_G0010870.1 mouse_genomes_project 12 5822619 5825000 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035614.1 MGP_BALBcJ_G0019958.1 mouse_genomes_project 12 98189087 98199456 + MGP_BALBcJ_P0035614 Calm1 protein_coding protein_coding MGP_BALBcJ_T0035615.1 MGP_BALBcJ_G0019958.1 mouse_genomes_project 12 98189181 98193590 + Calm1 protein_coding retained_intron MGP_BALBcJ_T0035616.1 MGP_BALBcJ_G0019958.1 mouse_genomes_project 12 98189796 98199456 + MGP_BALBcJ_P0035616 Calm1 protein_coding protein_coding MGP_BALBcJ_T0035617.1 MGP_BALBcJ_G0019958.1 mouse_genomes_project 12 98195055 98196148 + Calm1 protein_coding retained_intron MGP_BALBcJ_T0034786.1 MGP_BALBcJ_G0019697.1 mouse_genomes_project 12 54155713 54649835 - MGP_BALBcJ_P0034786 Slc25a21 protein_coding protein_coding MGP_BALBcJ_T0034787.1 MGP_BALBcJ_G0019697.1 mouse_genomes_project 12 54156890 54611611 - MGP_BALBcJ_P0034787 Slc25a21 protein_coding protein_coding MGP_BALBcJ_T0034788.1 MGP_BALBcJ_G0019697.1 mouse_genomes_project 12 54171940 54220125 - Slc25a21 protein_coding processed_transcript MGP_BALBcJ_T0034789.1 MGP_BALBcJ_G0019697.1 mouse_genomes_project 12 54218276 54429613 - Slc25a21 protein_coding retained_intron MGP_BALBcJ_T0009760.1 MGP_BALBcJ_G0007885.1 mouse_genomes_project 12 23753002 23753112 - Mir6538 miRNA miRNA MGP_BALBcJ_T0009855.1 MGP_BALBcJ_G0007980.1 mouse_genomes_project 12 108125992 108126070 + Mir544 miRNA miRNA MGP_BALBcJ_T0006431.1 MGP_BALBcJ_G0005362.1 mouse_genomes_project 12 105006329 105037355 - 4933406K04Rik lincRNA lincRNA MGP_BALBcJ_T0006432.1 MGP_BALBcJ_G0005362.1 mouse_genomes_project 12 105016886 105037317 - 4933406K04Rik lincRNA lincRNA MGP_BALBcJ_T0006433.1 MGP_BALBcJ_G0005362.1 mouse_genomes_project 12 105022286 105037326 - 4933406K04Rik lincRNA lincRNA MGP_BALBcJ_T0006434.1 MGP_BALBcJ_G0005362.1 mouse_genomes_project 12 105027150 105037355 - 4933406K04Rik lincRNA lincRNA MGP_BALBcJ_T0035577.1 MGP_BALBcJ_G0019948.1 mouse_genomes_project 12 96644184 96703457 - MGP_BALBcJ_P0035577 Ptpn21 protein_coding protein_coding MGP_BALBcJ_T0035578.1 MGP_BALBcJ_G0019948.1 mouse_genomes_project 12 96644184 96706217 - MGP_BALBcJ_P0035578 Ptpn21 protein_coding protein_coding MGP_BALBcJ_T0011301.1 MGP_BALBcJ_G0009426.1 mouse_genomes_project 12 32338995 32339236 - Gm24359 misc_RNA misc_RNA MGP_BALBcJ_T0035514.1 MGP_BALBcJ_G0019935.1 mouse_genomes_project 12 86412874 86518839 + MGP_BALBcJ_P0035514 Adck1 protein_coding protein_coding MGP_BALBcJ_T0035515.1 MGP_BALBcJ_G0019935.1 mouse_genomes_project 12 86413121 86518838 + MGP_BALBcJ_P0035515 Adck1 protein_coding protein_coding MGP_BALBcJ_T0000261.1 MGP_BALBcJ_G0000202.1 mouse_genomes_project 12 114408992 114409422 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0000235.1 MGP_BALBcJ_G0000176.1 mouse_genomes_project 12 112106977 112107414 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0035184.1 MGP_BALBcJ_G0019839.1 mouse_genomes_project 12 79112866 79115370 - MGP_BALBcJ_P0035184 Adam4 protein_coding protein_coding MGP_BALBcJ_T0098480.1 MGP_BALBcJ_G0036534.1 mouse_genomes_project 12 53503945 53504065 - Gm23799 rRNA rRNA MGP_BALBcJ_T0035278.1 MGP_BALBcJ_G0019857.1 mouse_genomes_project 12 81755132 81755798 - MGP_BALBcJ_P0035278 Gm26571 protein_coding protein_coding MGP_BALBcJ_T0009841.1 MGP_BALBcJ_G0007966.1 mouse_genomes_project 12 108113938 108114014 + Mir543 miRNA miRNA MGP_BALBcJ_T0100601.1 MGP_BALBcJ_G0038637.1 mouse_genomes_project 12 108027335 108027410 + Gm24564 snoRNA snoRNA MGP_BALBcJ_T0012842.1 MGP_BALBcJ_G0010939.1 mouse_genomes_project 12 115523534 115523827 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009800.1 MGP_BALBcJ_G0007925.1 mouse_genomes_project 12 103211572 103211637 - Mir3069 miRNA miRNA MGP_BALBcJ_T0035652.1 MGP_BALBcJ_G0019969.1 mouse_genomes_project 12 99891325 99930190 - MGP_BALBcJ_P0035652 Atxn3 protein_coding protein_coding MGP_BALBcJ_T0035653.1 MGP_BALBcJ_G0019969.1 mouse_genomes_project 12 99895502 99906958 - MGP_BALBcJ_P0035653 Atxn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035654.1 MGP_BALBcJ_G0019969.1 mouse_genomes_project 12 99905526 99930187 - MGP_BALBcJ_P0035654 Atxn3 protein_coding protein_coding MGP_BALBcJ_T0035655.1 MGP_BALBcJ_G0019969.1 mouse_genomes_project 12 99905528 99930187 - MGP_BALBcJ_P0035655 Atxn3 protein_coding protein_coding MGP_BALBcJ_T0035656.1 MGP_BALBcJ_G0019969.1 mouse_genomes_project 12 99905551 99930092 - MGP_BALBcJ_P0035656 Atxn3 protein_coding protein_coding MGP_BALBcJ_T0006377.1 MGP_BALBcJ_G0005317.1 mouse_genomes_project 12 27843382 27848606 - Gm28806 lincRNA lincRNA MGP_BALBcJ_T0035742.1 MGP_BALBcJ_G0019999.1 mouse_genomes_project 12 101751590 101762197 - MGP_BALBcJ_P0035742 protein_coding protein_coding MGP_BALBcJ_T0099339.1 MGP_BALBcJ_G0037375.1 mouse_genomes_project 12 75073274 75073373 + Gm24775 snRNA snRNA MGP_BALBcJ_T0035531.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88964758 89325710 - MGP_BALBcJ_P0035531 Cep128 protein_coding protein_coding MGP_BALBcJ_T0035532.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88964758 89215222 - MGP_BALBcJ_P0035532 Cep128 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035533.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88965606 89026633 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035534.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88965608 88995638 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035535.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88965608 88995638 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035536.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88965831 89144684 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035537.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 88987961 89144737 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035538.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 89173646 89208337 - MGP_BALBcJ_P0035538 Cep128 protein_coding protein_coding MGP_BALBcJ_T0035539.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 89231315 89325710 - Cep128 protein_coding retained_intron MGP_BALBcJ_T0035540.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 89261474 89274414 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035541.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 89279359 89325660 - Cep128 protein_coding retained_intron MGP_BALBcJ_T0035542.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 89281181 89325710 - Cep128 protein_coding processed_transcript MGP_BALBcJ_T0035543.1 MGP_BALBcJ_G0019938.1 mouse_genomes_project 12 89303995 89325654 - Cep128 protein_coding retained_intron MGP_BALBcJ_T0034993.1 MGP_BALBcJ_G0019765.1 mouse_genomes_project 12 70245094 70256069 - MGP_BALBcJ_P0034993 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0009827.1 MGP_BALBcJ_G0007952.1 mouse_genomes_project 12 108105749 108105815 + Mir379 miRNA miRNA MGP_BALBcJ_T0035062.1 MGP_BALBcJ_G0019789.1 mouse_genomes_project 12 73784954 73851681 - MGP_BALBcJ_P0035062 Esr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035063.1 MGP_BALBcJ_G0019789.1 mouse_genomes_project 12 73784954 73851681 - MGP_BALBcJ_P0035063 Esr2 protein_coding protein_coding MGP_BALBcJ_T0035064.1 MGP_BALBcJ_G0019789.1 mouse_genomes_project 12 73784954 73841919 - MGP_BALBcJ_P0035064 Esr2 protein_coding protein_coding MGP_BALBcJ_T0035065.1 MGP_BALBcJ_G0019789.1 mouse_genomes_project 12 73784974 73851681 - MGP_BALBcJ_P0035065 Esr2 protein_coding protein_coding MGP_BALBcJ_T0100581.1 MGP_BALBcJ_G0038617.1 mouse_genomes_project 12 62285354 62285485 + Gm24066 snoRNA snoRNA MGP_BALBcJ_T0098484.1 MGP_BALBcJ_G0036538.1 mouse_genomes_project 12 80361465 80361568 - n-R5s63 rRNA rRNA MGP_BALBcJ_T0035646.1 MGP_BALBcJ_G0019968.1 mouse_genomes_project 12 99810312 99885694 - MGP_BALBcJ_P0035646 Trip11 protein_coding protein_coding MGP_BALBcJ_T0035647.1 MGP_BALBcJ_G0019968.1 mouse_genomes_project 12 99813809 99866834 - MGP_BALBcJ_P0035647 Trip11 protein_coding protein_coding MGP_BALBcJ_T0035648.1 MGP_BALBcJ_G0019968.1 mouse_genomes_project 12 99846250 99856169 - MGP_BALBcJ_P0035648 Trip11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035649.1 MGP_BALBcJ_G0019968.1 mouse_genomes_project 12 99858781 99885550 - MGP_BALBcJ_P0035649 Trip11 protein_coding protein_coding MGP_BALBcJ_T0035650.1 MGP_BALBcJ_G0019968.1 mouse_genomes_project 12 99862113 99885567 - MGP_BALBcJ_P0035650 Trip11 protein_coding protein_coding MGP_BALBcJ_T0035651.1 MGP_BALBcJ_G0019968.1 mouse_genomes_project 12 99884702 99885582 - Trip11 protein_coding processed_transcript MGP_BALBcJ_T0102173.1 MGP_BALBcJ_G0039990.1 mouse_genomes_project 12 46217979 46221175 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0035773.1 MGP_BALBcJ_G0020016.1 mouse_genomes_project 12 102578463 102586073 + MGP_BALBcJ_P0035773 Serpina3n protein_coding protein_coding MGP_BALBcJ_T0003377.1 MGP_BALBcJ_G0003102.1 mouse_genomes_project 12 54908790 54917700 - Gm16246 antisense antisense MGP_BALBcJ_T0006403.1 MGP_BALBcJ_G0005335.1 mouse_genomes_project 12 77806350 77818650 - 2310015A10Rik lincRNA lincRNA MGP_BALBcJ_T0034368.1 MGP_BALBcJ_G0019532.1 mouse_genomes_project 12 5987378 6014064 + MGP_BALBcJ_P0034368 Matn3 protein_coding protein_coding MGP_BALBcJ_T0099337.1 MGP_BALBcJ_G0037373.1 mouse_genomes_project 12 68259680 68259781 + Gm24474 snRNA snRNA MGP_BALBcJ_T0035510.1 MGP_BALBcJ_G0019931.1 mouse_genomes_project 12 86165448 86177479 - MGP_BALBcJ_P0035510 Gm13023 protein_coding protein_coding MGP_BALBcJ_T0035044.1 MGP_BALBcJ_G0019787.1 mouse_genomes_project 12 73375090 73396826 - MGP_BALBcJ_P0035044 Sgpp1 protein_coding protein_coding MGP_BALBcJ_T0034402.1 MGP_BALBcJ_G0019552.1 mouse_genomes_project 12 13683648 13737847 - MGP_BALBcJ_P0034402 Lpin1 protein_coding protein_coding MGP_BALBcJ_T0034403.1 MGP_BALBcJ_G0019552.1 mouse_genomes_project 12 13683648 13737847 - MGP_BALBcJ_P0034403 Lpin1 protein_coding protein_coding MGP_BALBcJ_T0034404.1 MGP_BALBcJ_G0019552.1 mouse_genomes_project 12 13683936 13737881 - MGP_BALBcJ_P0034404 Lpin1 protein_coding unknown_likely_coding MGP_BALBcJ_T0035113.1 MGP_BALBcJ_G0019808.1 mouse_genomes_project 12 76370876 76414802 + MGP_BALBcJ_P0035113 Fam71d protein_coding protein_coding MGP_BALBcJ_T0000070.1 MGP_BALBcJ_G0000054.1 mouse_genomes_project 12 112619734 112620315 - MGP_BALBcJ_P0000070 IG_V_gene IG_V_gene MGP_BALBcJ_T0034918.1 MGP_BALBcJ_G0019742.1 mouse_genomes_project 12 67551573 67557822 + MGP_BALBcJ_P0034918 Gm3086 protein_coding protein_coding MGP_BALBcJ_T0012840.1 MGP_BALBcJ_G0010937.1 mouse_genomes_project 12 114526195 114538350 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098746.1 MGP_BALBcJ_G0036800.1 mouse_genomes_project 12 103211570 103211845 - Scarna13 scaRNA scaRNA MGP_BALBcJ_T0000109.1 MGP_BALBcJ_G0000083.1 mouse_genomes_project 12 113875295 113875768 - MGP_BALBcJ_P0000109 Ighv1-47 IG_V_gene IG_V_gene MGP_BALBcJ_T0000110.1 MGP_BALBcJ_G0000083.1 mouse_genomes_project 12 113875295 113875589 - MGP_BALBcJ_P0000110 Ighv1-47 IG_V_gene IG_V_gene MGP_BALBcJ_T0035365.1 MGP_BALBcJ_G0019886.1 mouse_genomes_project 12 82799594 82820080 + MGP_BALBcJ_P0035365 Fcf1 protein_coding protein_coding MGP_BALBcJ_T0035366.1 MGP_BALBcJ_G0019886.1 mouse_genomes_project 12 82799678 82820068 + MGP_BALBcJ_P0035366 Fcf1 protein_coding protein_coding MGP_BALBcJ_T0035367.1 MGP_BALBcJ_G0019886.1 mouse_genomes_project 12 82816986 82820074 + Fcf1 protein_coding retained_intron MGP_BALBcJ_T0003364.1 MGP_BALBcJ_G0003091.1 mouse_genomes_project 12 651354 661643 - Dtnbos antisense antisense MGP_BALBcJ_T0003382.1 MGP_BALBcJ_G0003106.1 mouse_genomes_project 12 68596860 68627164 - 3110056K07Rik antisense antisense MGP_BALBcJ_T0003383.1 MGP_BALBcJ_G0003106.1 mouse_genomes_project 12 68621365 68627400 - 3110056K07Rik antisense antisense MGP_BALBcJ_T0009840.1 MGP_BALBcJ_G0007965.1 mouse_genomes_project 12 108113765 108113864 + Mir666 miRNA miRNA MGP_BALBcJ_T0098315.1 MGP_BALBcJ_G0036369.1 mouse_genomes_project 12 32322642 32324260 + pseudogene pseudogene MGP_BALBcJ_T0035172.1 MGP_BALBcJ_G0019834.1 mouse_genomes_project 12 78721056 78883161 + MGP_BALBcJ_P0035172 Smoc1 protein_coding protein_coding MGP_BALBcJ_T0035173.1 MGP_BALBcJ_G0019834.1 mouse_genomes_project 12 78721076 78883157 + MGP_BALBcJ_P0035173 Smoc1 protein_coding protein_coding MGP_BALBcJ_T0035174.1 MGP_BALBcJ_G0019834.1 mouse_genomes_project 12 78721076 78883157 + MGP_BALBcJ_P0035174 Smoc1 protein_coding protein_coding MGP_BALBcJ_T0000064.1 MGP_BALBcJ_G0000049.1 mouse_genomes_project 12 112415920 112416366 - MGP_BALBcJ_P0000064 Ighv2-9 IG_V_gene IG_V_gene MGP_BALBcJ_T0034594.1 MGP_BALBcJ_G0019617.1 mouse_genomes_project 12 30378644 30441808 - MGP_BALBcJ_P0034594 Cdhr3 protein_coding protein_coding MGP_BALBcJ_T0012835.1 MGP_BALBcJ_G0010932.1 mouse_genomes_project 12 111890061 111890418 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035023.1 MGP_BALBcJ_G0019776.1 mouse_genomes_project 12 71183820 71187102 - MGP_BALBcJ_P0035023 Tmem30b protein_coding protein_coding MGP_BALBcJ_T0006419.1 MGP_BALBcJ_G0005351.1 mouse_genomes_project 12 97547469 97605101 + Gm26839 lincRNA lincRNA MGP_BALBcJ_T0009879.1 MGP_BALBcJ_G0008004.1 mouse_genomes_project 12 111547373 111547473 - Gm44471 miRNA miRNA MGP_BALBcJ_T0009846.1 MGP_BALBcJ_G0007971.1 mouse_genomes_project 12 108120127 108120209 + Mir376b miRNA miRNA MGP_BALBcJ_T0009770.1 MGP_BALBcJ_G0007895.1 mouse_genomes_project 12 51964176 51964256 - Mir1892 miRNA miRNA MGP_BALBcJ_T0034610.1 MGP_BALBcJ_G0019620.1 mouse_genomes_project 12 30775652 30785451 + MGP_BALBcJ_P0034610 Twistnb protein_coding protein_coding MGP_BALBcJ_T0000076.1 MGP_BALBcJ_G0000060.1 mouse_genomes_project 12 112885272 112885702 - MGP_BALBcJ_P0000076 Ighv14-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0000077.1 MGP_BALBcJ_G0000060.1 mouse_genomes_project 12 112885278 112885697 - MGP_BALBcJ_P0000077 Ighv14-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0003401.1 MGP_BALBcJ_G0003123.1 mouse_genomes_project 12 101309073 101310712 - Gm29508 antisense antisense MGP_BALBcJ_T0003402.1 MGP_BALBcJ_G0003123.1 mouse_genomes_project 12 101309074 101311480 - Gm29508 antisense antisense MGP_BALBcJ_T0034634.1 MGP_BALBcJ_G0019635.1 mouse_genomes_project 12 33548205 33557881 - MGP_BALBcJ_P0034634 Lrrc72 protein_coding protein_coding MGP_BALBcJ_T0034635.1 MGP_BALBcJ_G0019635.1 mouse_genomes_project 12 33549402 33593231 - MGP_BALBcJ_P0034635 Lrrc72 protein_coding protein_coding MGP_BALBcJ_T0034636.1 MGP_BALBcJ_G0019635.1 mouse_genomes_project 12 33552127 33557897 - Lrrc72 protein_coding retained_intron MGP_BALBcJ_T0099308.1 MGP_BALBcJ_G0037344.1 mouse_genomes_project 12 6936426 6936530 - Gm22845 snRNA snRNA MGP_BALBcJ_T0035397.1 MGP_BALBcJ_G0019897.1 mouse_genomes_project 12 83187568 83222188 - MGP_BALBcJ_P0035397 Tmed10 protein_coding protein_coding MGP_BALBcJ_T0034843.1 MGP_BALBcJ_G0019711.1 mouse_genomes_project 12 59034462 59125977 + Lrfn5 protein_coding processed_transcript MGP_BALBcJ_T0034844.1 MGP_BALBcJ_G0019711.1 mouse_genomes_project 12 59034479 59184131 + Lrfn5 protein_coding processed_transcript MGP_BALBcJ_T0034845.1 MGP_BALBcJ_G0019711.1 mouse_genomes_project 12 59035291 59359812 + MGP_BALBcJ_P0034845 Lrfn5 protein_coding protein_coding MGP_BALBcJ_T0034846.1 MGP_BALBcJ_G0019711.1 mouse_genomes_project 12 59035291 59343539 + MGP_BALBcJ_P0034846 Lrfn5 protein_coding protein_coding MGP_BALBcJ_T0034847.1 MGP_BALBcJ_G0019711.1 mouse_genomes_project 12 59358152 59360226 + Lrfn5 protein_coding retained_intron MGP_BALBcJ_T0034668.1 MGP_BALBcJ_G0019645.1 mouse_genomes_project 12 37540073 37560187 - MGP_BALBcJ_P0034668 Lsmem1 protein_coding protein_coding MGP_BALBcJ_T0035382.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83067562 83074713 + MGP_BALBcJ_P0035382 Eif2b2 protein_coding protein_coding MGP_BALBcJ_T0035383.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83067585 83070929 + MGP_BALBcJ_P0035383 Eif2b2 protein_coding protein_coding MGP_BALBcJ_T0035384.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83067594 83074235 + MGP_BALBcJ_P0035384 Eif2b2 protein_coding protein_coding MGP_BALBcJ_T0035385.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83067596 83068031 + Eif2b2 protein_coding retained_intron MGP_BALBcJ_T0035386.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83067627 83070916 + Eif2b2 protein_coding retained_intron MGP_BALBcJ_T0035387.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83067663 83071578 + Eif2b2 protein_coding retained_intron MGP_BALBcJ_T0035388.1 MGP_BALBcJ_G0019892.1 mouse_genomes_project 12 83072610 83074578 + Eif2b2 protein_coding retained_intron MGP_BALBcJ_T0035787.1 MGP_BALBcJ_G0020028.1 mouse_genomes_project 12 103456055 103459348 + MGP_BALBcJ_P0035787 Tcl1b4 protein_coding protein_coding MGP_BALBcJ_T0035549.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89558769 89711873 - MGP_BALBcJ_P0035549 Ston2 protein_coding protein_coding MGP_BALBcJ_T0035550.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89561560 89668489 - MGP_BALBcJ_P0035550 Ston2 protein_coding protein_coding MGP_BALBcJ_T0035551.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89626849 89637870 - Ston2 protein_coding processed_transcript MGP_BALBcJ_T0035552.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89637977 89704574 - MGP_BALBcJ_P0035552 Ston2 protein_coding protein_coding MGP_BALBcJ_T0035553.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89659678 89696613 - Ston2 protein_coding processed_transcript MGP_BALBcJ_T0035554.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89668251 89670716 - MGP_BALBcJ_P0035554 Ston2 protein_coding protein_coding MGP_BALBcJ_T0035555.1 MGP_BALBcJ_G0019941.1 mouse_genomes_project 12 89711237 89713824 - Ston2 protein_coding processed_transcript MGP_BALBcJ_T0000116.1 MGP_BALBcJ_G0000088.1 mouse_genomes_project 12 114915214 114915507 - MGP_BALBcJ_P0000116 IG_V_gene IG_V_gene MGP_BALBcJ_T0000118.1 MGP_BALBcJ_G0000088.1 mouse_genomes_project 12 114915214 114915663 - MGP_BALBcJ_P0000118 IG_V_gene IG_V_gene MGP_BALBcJ_T0006362.1 MGP_BALBcJ_G0005305.1 mouse_genomes_project 12 4339706 4347934 - 1700101O22Rik lincRNA lincRNA MGP_BALBcJ_T0034725.1 MGP_BALBcJ_G0019667.1 mouse_genomes_project 12 49053229 49142608 - MGP_BALBcJ_P0034725 Hectd1 protein_coding protein_coding MGP_BALBcJ_T0034726.1 MGP_BALBcJ_G0019667.1 mouse_genomes_project 12 49053229 49142608 - MGP_BALBcJ_P0034726 Hectd1 protein_coding protein_coding MGP_BALBcJ_T0098470.1 MGP_BALBcJ_G0036524.1 mouse_genomes_project 12 1250979 1251093 + Gm23756 rRNA rRNA MGP_BALBcJ_T0000113.1 MGP_BALBcJ_G0000086.1 mouse_genomes_project 12 114915213 114915646 - MGP_BALBcJ_P0000113 IG_V_gene IG_V_gene MGP_BALBcJ_T0000114.1 MGP_BALBcJ_G0000086.1 mouse_genomes_project 12 114915213 114915507 - MGP_BALBcJ_P0000114 IG_V_gene IG_V_gene MGP_BALBcJ_T0034431.1 MGP_BALBcJ_G0019560.1 mouse_genomes_project 12 14418264 14433488 + Pdia6 protein_coding retained_intron MGP_BALBcJ_T0034432.1 MGP_BALBcJ_G0019560.1 mouse_genomes_project 12 14418264 14436479 + MGP_BALBcJ_P0034432 Pdia6 protein_coding protein_coding MGP_BALBcJ_T0034433.1 MGP_BALBcJ_G0019560.1 mouse_genomes_project 12 14418327 14425908 + Pdia6 protein_coding processed_transcript MGP_BALBcJ_T0034434.1 MGP_BALBcJ_G0019560.1 mouse_genomes_project 12 14425557 14429333 + Pdia6 protein_coding retained_intron MGP_BALBcJ_T0034435.1 MGP_BALBcJ_G0019560.1 mouse_genomes_project 12 14428921 14430624 + Pdia6 protein_coding processed_transcript MGP_BALBcJ_T0000244.1 MGP_BALBcJ_G0000185.1 mouse_genomes_project 12 112665119 112665415 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0035950.1 MGP_BALBcJ_G0020078.1 mouse_genomes_project 12 110115559 110118538 - MGP_BALBcJ_P0035950 Ckb protein_coding protein_coding MGP_BALBcJ_T0035412.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674318 83707558 + MGP_BALBcJ_P0035412 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035413.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674332 83743904 + MGP_BALBcJ_P0035413 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035414.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674366 83733607 + MGP_BALBcJ_P0035414 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035415.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674369 83905139 + MGP_BALBcJ_P0035415 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035416.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674627 83867434 + MGP_BALBcJ_P0035416 Ttll5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035417.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674628 83904587 + MGP_BALBcJ_P0035417 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035418.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674637 83719257 + Ttll5 protein_coding processed_transcript MGP_BALBcJ_T0035419.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674637 83905138 + MGP_BALBcJ_P0035419 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035420.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674644 83693315 + MGP_BALBcJ_P0035420 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035421.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674680 83695210 + Ttll5 protein_coding retained_intron MGP_BALBcJ_T0035422.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674680 83698845 + MGP_BALBcJ_P0035422 Ttll5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035423.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83674734 83905138 + MGP_BALBcJ_P0035423 Ttll5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035424.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83676143 83904588 + MGP_BALBcJ_P0035424 Ttll5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035425.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83728182 83741358 + Ttll5 protein_coding retained_intron MGP_BALBcJ_T0035426.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83761868 83779250 + MGP_BALBcJ_P0035426 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035427.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83767087 83905138 + MGP_BALBcJ_P0035427 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035428.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83772318 83864185 + MGP_BALBcJ_P0035428 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035429.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83782479 83905138 + MGP_BALBcJ_P0035429 Ttll5 protein_coding protein_coding MGP_BALBcJ_T0035430.1 MGP_BALBcJ_G0019903.1 mouse_genomes_project 12 83790556 83912808 + MGP_BALBcJ_P0035430 Ttll5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009805.1 MGP_BALBcJ_G0007930.1 mouse_genomes_project 12 107939652 107939732 + Mir1906-2 miRNA miRNA MGP_BALBcJ_T0000248.1 MGP_BALBcJ_G0000189.1 mouse_genomes_project 12 113019972 113020263 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0006359.1 MGP_BALBcJ_G0005303.1 mouse_genomes_project 12 202266 216970 - Gm26520 lincRNA lincRNA MGP_BALBcJ_T0035139.1 MGP_BALBcJ_G0019820.1 mouse_genomes_project 12 76911648 76976147 - MGP_BALBcJ_P0035139 Zfyve26 protein_coding protein_coding MGP_BALBcJ_T0100623.1 MGP_BALBcJ_G0038659.1 mouse_genomes_project 12 108086039 108086107 + Gm25224 snoRNA snoRNA MGP_BALBcJ_T0035944.1 MGP_BALBcJ_G0020075.1 mouse_genomes_project 12 109913048 109914261 - MGP_BALBcJ_P0035944 Gm266 protein_coding protein_coding MGP_BALBcJ_T0034638.1 MGP_BALBcJ_G0019637.1 mouse_genomes_project 12 33736049 33736989 - MGP_BALBcJ_P0034638 D630036H23Rik protein_coding protein_coding MGP_BALBcJ_T0035629.1 MGP_BALBcJ_G0019962.1 mouse_genomes_project 12 98862166 98894452 - MGP_BALBcJ_P0035629 Gpr68 protein_coding protein_coding MGP_BALBcJ_T0035630.1 MGP_BALBcJ_G0019962.1 mouse_genomes_project 12 98862169 98894435 - MGP_BALBcJ_P0035630 Gpr68 protein_coding protein_coding MGP_BALBcJ_T0035631.1 MGP_BALBcJ_G0019962.1 mouse_genomes_project 12 98862169 98885397 - MGP_BALBcJ_P0035631 Gpr68 protein_coding protein_coding MGP_BALBcJ_T0035632.1 MGP_BALBcJ_G0019962.1 mouse_genomes_project 12 98864800 98885371 - Gpr68 protein_coding processed_transcript MGP_BALBcJ_T0035634.1 MGP_BALBcJ_G0019962.1 mouse_genomes_project 12 98873551 98894452 - Gpr68 protein_coding processed_transcript MGP_BALBcJ_T0035635.1 MGP_BALBcJ_G0019962.1 mouse_genomes_project 12 98873739 98885397 - Gpr68 protein_coding processed_transcript MGP_BALBcJ_T0034344.1 MGP_BALBcJ_G0019528.1 mouse_genomes_project 12 5511257 5522131 - MGP_BALBcJ_P0034344 Slc7a15 protein_coding protein_coding MGP_BALBcJ_T0034345.1 MGP_BALBcJ_G0019528.1 mouse_genomes_project 12 5520786 5522152 - Slc7a15 protein_coding processed_transcript MGP_BALBcJ_T0099326.1 MGP_BALBcJ_G0037362.1 mouse_genomes_project 12 52340246 52340352 + Gm24296 snRNA snRNA MGP_BALBcJ_T0009881.1 MGP_BALBcJ_G0008006.1 mouse_genomes_project 12 114482309 114482383 - Gm27722 miRNA miRNA MGP_BALBcJ_T0035281.1 MGP_BALBcJ_G0019860.1 mouse_genomes_project 12 81789375 81794346 + MGP_BALBcJ_P0035281 protein_coding protein_coding MGP_BALBcJ_T0035356.1 MGP_BALBcJ_G0019884.1 mouse_genomes_project 12 82704167 82706531 + MGP_BALBcJ_P0035356 D030025P21Rik protein_coding protein_coding MGP_BALBcJ_T0003378.1 MGP_BALBcJ_G0003103.1 mouse_genomes_project 12 55064584 55095341 - 4921518K17Rik antisense antisense MGP_BALBcJ_T0000087.1 MGP_BALBcJ_G0000066.1 mouse_genomes_project 12 112994897 112995326 - MGP_BALBcJ_P0000087 Ighv9-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0000088.1 MGP_BALBcJ_G0000066.1 mouse_genomes_project 12 112994897 112995191 - MGP_BALBcJ_P0000088 Ighv9-4 IG_V_gene IG_V_gene MGP_BALBcJ_T0099331.1 MGP_BALBcJ_G0037367.1 mouse_genomes_project 12 61130144 61130251 + Gm24921 snRNA snRNA MGP_BALBcJ_T0000241.1 MGP_BALBcJ_G0000182.1 mouse_genomes_project 12 112486740 112585169 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034850.1 MGP_BALBcJ_G0019714.1 mouse_genomes_project 12 62463214 62469882 + MGP_BALBcJ_P0034850 Gm527 protein_coding protein_coding MGP_BALBcJ_T0035395.1 MGP_BALBcJ_G0019895.1 mouse_genomes_project 12 83135399 83146167 + MGP_BALBcJ_P0035395 Zc2hc1c protein_coding protein_coding MGP_BALBcJ_T0006376.1 MGP_BALBcJ_G0005316.1 mouse_genomes_project 12 27774748 27827399 - 2310016D03Rik lincRNA lincRNA MGP_BALBcJ_T0000103.1 MGP_BALBcJ_G0000079.1 mouse_genomes_project 12 113354250 113354685 - MGP_BALBcJ_P0000103 Ighv15-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0000104.1 MGP_BALBcJ_G0000079.1 mouse_genomes_project 12 113354250 113354685 - MGP_BALBcJ_P0000104 Ighv15-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0000065.1 MGP_BALBcJ_G0000050.1 mouse_genomes_project 12 112434512 112435031 - MGP_BALBcJ_P0000065 Ighv7-1 IG_V_gene IG_V_gene MGP_BALBcJ_T0009796.1 MGP_BALBcJ_G0007921.1 mouse_genomes_project 12 99011271 99011368 - Mir1190 miRNA miRNA MGP_BALBcJ_T0012777.1 MGP_BALBcJ_G0010874.1 mouse_genomes_project 12 12878247 12879246 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006424.1 MGP_BALBcJ_G0005356.1 mouse_genomes_project 12 100711243 100718501 - Gm21971 lincRNA lincRNA MGP_BALBcJ_T0003387.1 MGP_BALBcJ_G0003110.1 mouse_genomes_project 12 78926286 78941202 + Gm3693 antisense antisense MGP_BALBcJ_T0003373.1 MGP_BALBcJ_G0003100.1 mouse_genomes_project 12 53979373 54052027 + Gm26973 antisense antisense MGP_BALBcJ_T0003374.1 MGP_BALBcJ_G0003100.1 mouse_genomes_project 12 53984641 54018398 + Gm26973 antisense antisense MGP_BALBcJ_T0003375.1 MGP_BALBcJ_G0003100.1 mouse_genomes_project 12 53984692 54052064 + Gm26973 antisense antisense MGP_BALBcJ_T0035343.1 MGP_BALBcJ_G0019879.1 mouse_genomes_project 12 82466592 82477125 + MGP_BALBcJ_P0035343 Vrtn protein_coding protein_coding MGP_BALBcJ_T0035344.1 MGP_BALBcJ_G0019879.1 mouse_genomes_project 12 82468128 82477125 + MGP_BALBcJ_P0035344 Vrtn protein_coding protein_coding MGP_BALBcJ_T0035345.1 MGP_BALBcJ_G0019879.1 mouse_genomes_project 12 82468469 82477125 + MGP_BALBcJ_P0035345 Vrtn protein_coding protein_coding MGP_BALBcJ_T0009838.1 MGP_BALBcJ_G0007963.1 mouse_genomes_project 12 108112257 108112331 + Mir679 miRNA miRNA MGP_BALBcJ_T0000117.1 MGP_BALBcJ_G0000089.1 mouse_genomes_project 12 114915214 114915668 - MGP_BALBcJ_P0000117 IG_V_gene IG_V_gene MGP_BALBcJ_T0009779.1 MGP_BALBcJ_G0007904.1 mouse_genomes_project 12 69753237 69753346 - Gm24466 miRNA miRNA MGP_BALBcJ_T0009787.1 MGP_BALBcJ_G0007912.1 mouse_genomes_project 12 83566899 83566960 - miRNA miRNA MGP_BALBcJ_T0034387.1 MGP_BALBcJ_G0019541.1 mouse_genomes_project 12 8338264 8395094 + MGP_BALBcJ_P0034387 Smc6 protein_coding protein_coding MGP_BALBcJ_T0006410.1 MGP_BALBcJ_G0005342.1 mouse_genomes_project 12 83813727 83831974 - Gm26531 lincRNA lincRNA MGP_BALBcJ_T0035402.1 MGP_BALBcJ_G0019899.1 mouse_genomes_project 12 83445160 83486320 + MGP_BALBcJ_P0035402 Jdp2 protein_coding protein_coding MGP_BALBcJ_T0035403.1 MGP_BALBcJ_G0019899.1 mouse_genomes_project 12 83445781 83486319 + MGP_BALBcJ_P0035403 Jdp2 protein_coding protein_coding MGP_BALBcJ_T0035404.1 MGP_BALBcJ_G0019899.1 mouse_genomes_project 12 83446383 83486320 + MGP_BALBcJ_P0035404 Jdp2 protein_coding protein_coding MGP_BALBcJ_T0035601.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97869648 97922845 + Tdp1 protein_coding retained_intron MGP_BALBcJ_T0035602.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97869665 97872819 + Tdp1 protein_coding processed_transcript MGP_BALBcJ_T0035603.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97869668 97940891 + MGP_BALBcJ_P0035603 Tdp1 protein_coding protein_coding MGP_BALBcJ_T0035604.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97871615 97876270 + MGP_BALBcJ_P0035604 Tdp1 protein_coding protein_coding MGP_BALBcJ_T0035605.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97876104 97940886 + MGP_BALBcJ_P0035605 Tdp1 protein_coding protein_coding MGP_BALBcJ_T0035606.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97896887 97897819 + Tdp1 protein_coding retained_intron MGP_BALBcJ_T0035607.1 MGP_BALBcJ_G0019954.1 mouse_genomes_project 12 97899245 97940891 + Tdp1 protein_coding retained_intron MGP_BALBcJ_T0017269.1 MGP_BALBcJ_G0015172.1 mouse_genomes_project 12 97275238 97279251 - Gm20682 processed_transcript processed_transcript MGP_BALBcJ_T0034618.1 MGP_BALBcJ_G0019626.1 mouse_genomes_project 12 32322630 32324306 + MGP_BALBcJ_P0034618 Prps1l1 protein_coding protein_coding MGP_BALBcJ_T0003396.1 MGP_BALBcJ_G0003119.1 mouse_genomes_project 12 89608106 89617022 + Gm16876 antisense antisense MGP_BALBcJ_T0034406.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13815530 13903129 - MGP_BALBcJ_P0034406 Greb1 protein_coding protein_coding MGP_BALBcJ_T0034407.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13815531 13949088 - MGP_BALBcJ_P0034407 Greb1 protein_coding protein_coding MGP_BALBcJ_T0034408.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13816999 13903083 - MGP_BALBcJ_P0034408 Greb1 protein_coding protein_coding MGP_BALBcJ_T0034409.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13818724 13819956 - Greb1 protein_coding retained_intron MGP_BALBcJ_T0034410.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13826998 13834958 - Greb1 protein_coding retained_intron MGP_BALBcJ_T0034411.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13834686 13885723 - Greb1 protein_coding retained_intron MGP_BALBcJ_T0034412.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13846764 13853716 - Greb1 protein_coding retained_intron MGP_BALBcJ_T0034413.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13851832 13854127 - Greb1 protein_coding retained_intron MGP_BALBcJ_T0034414.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13851843 13854267 - MGP_BALBcJ_P0034414 Greb1 protein_coding protein_coding MGP_BALBcJ_T0034415.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13853578 13857451 - MGP_BALBcJ_P0034415 Greb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034416.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13868866 13885621 - Greb1 protein_coding retained_intron MGP_BALBcJ_T0034417.1 MGP_BALBcJ_G0019554.1 mouse_genomes_project 12 13878771 13949285 - MGP_BALBcJ_P0034417 Greb1 protein_coding protein_coding MGP_BALBcJ_T0000234.1 MGP_BALBcJ_G0000175.1 mouse_genomes_project 12 112105665 112106134 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0100587.1 MGP_BALBcJ_G0038623.1 mouse_genomes_project 12 70782733 70782865 - Gm23910 snoRNA snoRNA MGP_BALBcJ_T0009868.1 MGP_BALBcJ_G0007993.1 mouse_genomes_project 12 108140075 108140154 + Mir369 miRNA miRNA MGP_BALBcJ_T0100588.1 MGP_BALBcJ_G0038624.1 mouse_genomes_project 12 75477933 75478063 - Gm24070 snoRNA snoRNA MGP_BALBcJ_T0034383.1 MGP_BALBcJ_G0019538.1 mouse_genomes_project 12 8174307 8228616 - MGP_BALBcJ_P0034383 Kcns3 protein_coding protein_coding MGP_BALBcJ_T0034384.1 MGP_BALBcJ_G0019538.1 mouse_genomes_project 12 8174307 8228147 - MGP_BALBcJ_P0034384 Kcns3 protein_coding protein_coding MGP_BALBcJ_T0034742.1 MGP_BALBcJ_G0019677.1 mouse_genomes_project 12 51990047 52013987 - MGP_BALBcJ_P0034742 Eapp protein_coding protein_coding MGP_BALBcJ_T0034743.1 MGP_BALBcJ_G0019677.1 mouse_genomes_project 12 51992160 52014024 - MGP_BALBcJ_P0034743 Eapp protein_coding protein_coding MGP_BALBcJ_T0034744.1 MGP_BALBcJ_G0019677.1 mouse_genomes_project 12 52002591 52014046 - MGP_BALBcJ_P0034744 Eapp protein_coding protein_coding MGP_BALBcJ_T0034745.1 MGP_BALBcJ_G0019677.1 mouse_genomes_project 12 52007365 52014065 - MGP_BALBcJ_P0034745 Eapp protein_coding protein_coding MGP_BALBcJ_T0012780.1 MGP_BALBcJ_G0010877.1 mouse_genomes_project 12 33435963 33436119 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035833.1 MGP_BALBcJ_G0020041.1 mouse_genomes_project 12 106512292 106536310 + MGP_BALBcJ_P0035833 Ccnk protein_coding protein_coding MGP_BALBcJ_T0035834.1 MGP_BALBcJ_G0020041.1 mouse_genomes_project 12 106512362 106535652 + MGP_BALBcJ_P0035834 Ccnk protein_coding unknown_likely_coding MGP_BALBcJ_T0006445.1 MGP_BALBcJ_G0005372.1 mouse_genomes_project 12 106882084 106901647 - Gm16596 lincRNA lincRNA MGP_BALBcJ_T0034874.1 MGP_BALBcJ_G0019723.1 mouse_genomes_project 12 66730771 66732232 - MGP_BALBcJ_P0034874 Rps29 protein_coding protein_coding MGP_BALBcJ_T0034875.1 MGP_BALBcJ_G0019723.1 mouse_genomes_project 12 66731407 66732100 - Rps29 protein_coding retained_intron MGP_BALBcJ_T0035368.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82832895 82906592 + MGP_BALBcJ_P0035368 Ylpm1 protein_coding protein_coding MGP_BALBcJ_T0035369.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82832926 82906615 + MGP_BALBcJ_P0035369 Ylpm1 protein_coding protein_coding MGP_BALBcJ_T0035370.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82833029 82906614 + MGP_BALBcJ_P0035370 Ylpm1 protein_coding protein_coding MGP_BALBcJ_T0035371.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82851052 82906592 + MGP_BALBcJ_P0035371 Ylpm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035372.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82878333 82895443 + Ylpm1 protein_coding retained_intron MGP_BALBcJ_T0035373.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82885796 82886728 + Ylpm1 protein_coding retained_intron MGP_BALBcJ_T0035374.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82896066 82906349 + Ylpm1 protein_coding retained_intron MGP_BALBcJ_T0035375.1 MGP_BALBcJ_G0019887.1 mouse_genomes_project 12 82900785 82906515 + Ylpm1 protein_coding retained_intron MGP_BALBcJ_T0098483.1 MGP_BALBcJ_G0036537.1 mouse_genomes_project 12 79926056 79926152 + n-R5s62 rRNA rRNA MGP_BALBcJ_T0017266.1 MGP_BALBcJ_G0015171.1 mouse_genomes_project 12 89598313 89609510 - Gm8378 processed_transcript processed_transcript MGP_BALBcJ_T0017267.1 MGP_BALBcJ_G0015171.1 mouse_genomes_project 12 89606019 89609555 - Gm8378 processed_transcript processed_transcript MGP_BALBcJ_T0017268.1 MGP_BALBcJ_G0015171.1 mouse_genomes_project 12 89607907 89609555 - Gm8378 processed_transcript processed_transcript MGP_BALBcJ_T0009810.1 MGP_BALBcJ_G0007935.1 mouse_genomes_project 12 107982375 107982436 - Mir3544 miRNA miRNA MGP_BALBcJ_T0098833.1 MGP_BALBcJ_G0036883.1 mouse_genomes_project 12 82751596 82752567 - Gm17193 sense_intronic sense_intronic MGP_BALBcJ_T0009765.1 MGP_BALBcJ_G0007890.1 mouse_genomes_project 12 32542945 32543032 - Mir680-3 miRNA miRNA MGP_BALBcJ_T0099341.1 MGP_BALBcJ_G0037377.1 mouse_genomes_project 12 76434055 76434157 - Gm25225 snRNA snRNA MGP_BALBcJ_T0034333.1 MGP_BALBcJ_G0019521.1 mouse_genomes_project 12 1836693 1979938 + MGP_BALBcJ_P0034333 Atad2b protein_coding protein_coding MGP_BALBcJ_T0034334.1 MGP_BALBcJ_G0019521.1 mouse_genomes_project 12 1836998 1983293 + MGP_BALBcJ_P0034334 Atad2b protein_coding unknown_likely_coding MGP_BALBcJ_T0099305.1 MGP_BALBcJ_G0037341.1 mouse_genomes_project 12 1673152 1673257 + Gm23676 snRNA snRNA MGP_BALBcJ_T0035208.1 MGP_BALBcJ_G0019845.1 mouse_genomes_project 12 79578504 79721925 + MGP_BALBcJ_P0035208 Pcnx protein_coding protein_coding MGP_BALBcJ_T0035209.1 MGP_BALBcJ_G0019845.1 mouse_genomes_project 12 79579313 79721927 + MGP_BALBcJ_P0035209 Pcnx protein_coding unknown_likely_coding MGP_BALBcJ_T0100622.1 MGP_BALBcJ_G0038658.1 mouse_genomes_project 12 108084617 108084688 + Gm22205 snoRNA snoRNA MGP_BALBcJ_T0100580.1 MGP_BALBcJ_G0038616.1 mouse_genomes_project 12 57112422 57112553 + Gm22673 snoRNA snoRNA MGP_BALBcJ_T0012772.1 MGP_BALBcJ_G0010869.1 mouse_genomes_project 12 2531390 2532277 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034691.1 MGP_BALBcJ_G0019652.1 mouse_genomes_project 12 41549414 41553594 - MGP_BALBcJ_P0034691 Dnajb9 protein_coding protein_coding MGP_BALBcJ_T0036005.1 MGP_BALBcJ_G0020096.1 mouse_genomes_project 12 111118089 111122414 + MGP_BALBcJ_P0036005 Siva1 protein_coding protein_coding MGP_BALBcJ_T0036006.1 MGP_BALBcJ_G0020096.1 mouse_genomes_project 12 111118089 111122414 + MGP_BALBcJ_P0036006 Siva1 protein_coding protein_coding MGP_BALBcJ_T0034699.1 MGP_BALBcJ_G0019655.1 mouse_genomes_project 12 42160679 42385827 - MGP_BALBcJ_P0034699 Stxbp6 protein_coding protein_coding MGP_BALBcJ_T0034700.1 MGP_BALBcJ_G0019655.1 mouse_genomes_project 12 42163413 42386208 - MGP_BALBcJ_P0034700 Stxbp6 protein_coding protein_coding MGP_BALBcJ_T0034701.1 MGP_BALBcJ_G0019655.1 mouse_genomes_project 12 42169382 42324050 - Stxbp6 protein_coding processed_transcript MGP_BALBcJ_T0034702.1 MGP_BALBcJ_G0019655.1 mouse_genomes_project 12 42208720 42385869 - MGP_BALBcJ_P0034702 Stxbp6 protein_coding protein_coding MGP_BALBcJ_T0034703.1 MGP_BALBcJ_G0019655.1 mouse_genomes_project 12 42324017 42386033 - MGP_BALBcJ_P0034703 Stxbp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034336.1 MGP_BALBcJ_G0019523.1 mouse_genomes_project 12 4947637 4989154 + MGP_BALBcJ_P0034336 Apob protein_coding protein_coding MGP_BALBcJ_T0034337.1 MGP_BALBcJ_G0019523.1 mouse_genomes_project 12 4947637 4959900 + MGP_BALBcJ_P0034337 Apob protein_coding protein_coding MGP_BALBcJ_T0034338.1 MGP_BALBcJ_G0019523.1 mouse_genomes_project 12 4947768 4988819 + MGP_BALBcJ_P0034338 Apob protein_coding protein_coding MGP_BALBcJ_T0034339.1 MGP_BALBcJ_G0019523.1 mouse_genomes_project 12 4984671 4989154 + MGP_BALBcJ_P0034339 Apob protein_coding protein_coding MGP_BALBcJ_T0035703.1 MGP_BALBcJ_G0019987.1 mouse_genomes_project 12 101307681 101313776 + MGP_BALBcJ_P0035703 Fam181a protein_coding protein_coding MGP_BALBcJ_T0035704.1 MGP_BALBcJ_G0019987.1 mouse_genomes_project 12 101311663 101313029 + MGP_BALBcJ_P0035704 Fam181a protein_coding protein_coding MGP_BALBcJ_T0035705.1 MGP_BALBcJ_G0019987.1 mouse_genomes_project 12 101311669 101313776 + MGP_BALBcJ_P0035705 Fam181a protein_coding protein_coding MGP_BALBcJ_T0100574.1 MGP_BALBcJ_G0038610.1 mouse_genomes_project 12 46856036 46856164 - Gm25015 snoRNA snoRNA MGP_BALBcJ_T0036106.1 MGP_BALBcJ_G0020131.1 mouse_genomes_project 12 118863168 118928479 + MGP_BALBcJ_P0036106 Tmem196 protein_coding protein_coding MGP_BALBcJ_T0036107.1 MGP_BALBcJ_G0020131.1 mouse_genomes_project 12 118863620 118928081 + MGP_BALBcJ_P0036107 Tmem196 protein_coding protein_coding MGP_BALBcJ_T0036108.1 MGP_BALBcJ_G0020131.1 mouse_genomes_project 12 118863634 118924153 + MGP_BALBcJ_P0036108 Tmem196 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036109.1 MGP_BALBcJ_G0020131.1 mouse_genomes_project 12 118863768 118927974 + MGP_BALBcJ_P0036109 Tmem196 protein_coding protein_coding MGP_BALBcJ_T0036110.1 MGP_BALBcJ_G0020131.1 mouse_genomes_project 12 118863780 118928322 + MGP_BALBcJ_P0036110 Tmem196 protein_coding protein_coding MGP_BALBcJ_T0035077.1 MGP_BALBcJ_G0019794.1 mouse_genomes_project 12 74050526 74077450 + MGP_BALBcJ_P0035077 Zbtb1 protein_coding protein_coding MGP_BALBcJ_T0034496.1 MGP_BALBcJ_G0019581.1 mouse_genomes_project 12 23781399 23795092 - MGP_BALBcJ_P0034496 Rsad2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034497.1 MGP_BALBcJ_G0019581.1 mouse_genomes_project 12 23781399 23795113 - MGP_BALBcJ_P0034497 Rsad2 protein_coding protein_coding MGP_BALBcJ_T0034498.1 MGP_BALBcJ_G0019581.1 mouse_genomes_project 12 23789299 23793521 - Rsad2 protein_coding processed_transcript MGP_BALBcJ_T0034507.1 MGP_BALBcJ_G0019588.1 mouse_genomes_project 12 26025243 26035422 + MGP_BALBcJ_P0034507 Rnaseh1 protein_coding protein_coding MGP_BALBcJ_T0034978.1 MGP_BALBcJ_G0019761.1 mouse_genomes_project 12 69721522 69801771 - MGP_BALBcJ_P0034978 Ccdc175 protein_coding protein_coding MGP_BALBcJ_T0009844.1 MGP_BALBcJ_G0007969.1 mouse_genomes_project 12 108119387 108119473 + Mir376c miRNA miRNA MGP_BALBcJ_T0098476.1 MGP_BALBcJ_G0036530.1 mouse_genomes_project 12 26415847 26415962 - Gm23342 rRNA rRNA MGP_BALBcJ_T0035180.1 MGP_BALBcJ_G0019836.1 mouse_genomes_project 12 79051919 79237866 - MGP_BALBcJ_P0035180 Gm20498 protein_coding protein_coding MGP_BALBcJ_T0035185.1 MGP_BALBcJ_G0019836.1 mouse_genomes_project 12 79167609 79237843 - MGP_BALBcJ_P0035185 Gm20498 protein_coding protein_coding MGP_BALBcJ_T0035192.1 MGP_BALBcJ_G0019836.1 mouse_genomes_project 12 79171565 79237838 - MGP_BALBcJ_P0035192 Gm20498 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035193.1 MGP_BALBcJ_G0019836.1 mouse_genomes_project 12 79171601 79237722 - Gm20498 protein_coding processed_transcript MGP_BALBcJ_T0035194.1 MGP_BALBcJ_G0019836.1 mouse_genomes_project 12 79171623 79237838 - Gm20498 protein_coding processed_transcript MGP_BALBcJ_T0035196.1 MGP_BALBcJ_G0019836.1 mouse_genomes_project 12 79178341 79237838 - Gm20498 protein_coding processed_transcript MGP_BALBcJ_T0034543.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28606902 28610467 + Lamb1 protein_coding retained_intron MGP_BALBcJ_T0034544.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28606905 28608401 + MGP_BALBcJ_P0034544 Lamb1 protein_coding protein_coding MGP_BALBcJ_T0034545.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28607008 28671546 + MGP_BALBcJ_P0034545 Lamb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034546.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28607029 28671464 + MGP_BALBcJ_P0034546 Lamb1 protein_coding protein_coding MGP_BALBcJ_T0034547.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28618228 28629597 + Lamb1 protein_coding retained_intron MGP_BALBcJ_T0034548.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28619747 28620512 + Lamb1 protein_coding retained_intron MGP_BALBcJ_T0034549.1 MGP_BALBcJ_G0019602.1 mouse_genomes_project 12 28665499 28666433 + Lamb1 protein_coding retained_intron MGP_BALBcJ_T0100554.1 MGP_BALBcJ_G0038590.1 mouse_genomes_project 12 6699442 6699570 - Gm23979 snoRNA snoRNA MGP_BALBcJ_T0034934.1 MGP_BALBcJ_G0019747.1 mouse_genomes_project 12 67834013 67844688 - MGP_BALBcJ_P0034934 Trim9 protein_coding unknown_likely_coding MGP_BALBcJ_T0034935.1 MGP_BALBcJ_G0019747.1 mouse_genomes_project 12 67834019 67940730 - MGP_BALBcJ_P0034935 Trim9 protein_coding protein_coding MGP_BALBcJ_T0034936.1 MGP_BALBcJ_G0019747.1 mouse_genomes_project 12 67834019 67940730 - MGP_BALBcJ_P0034936 Trim9 protein_coding protein_coding MGP_BALBcJ_T0034937.1 MGP_BALBcJ_G0019747.1 mouse_genomes_project 12 67853253 67940730 - MGP_BALBcJ_P0034937 Trim9 protein_coding protein_coding MGP_BALBcJ_T0035770.1 MGP_BALBcJ_G0020014.1 mouse_genomes_project 12 102481455 102489112 + MGP_BALBcJ_P0035770 Serpina3k protein_coding protein_coding MGP_BALBcJ_T0009836.1 MGP_BALBcJ_G0007961.1 mouse_genomes_project 12 108110161 108110258 + Mir329 miRNA miRNA MGP_BALBcJ_T0000108.1 MGP_BALBcJ_G0000082.1 mouse_genomes_project 12 113453028 113453462 - MGP_BALBcJ_P0000108 Ighv1-15 IG_V_gene IG_V_gene MGP_BALBcJ_T0000066.1 MGP_BALBcJ_G0000051.1 mouse_genomes_project 12 112451100 112451561 - MGP_BALBcJ_P0000066 Ighv7-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0000067.1 MGP_BALBcJ_G0000051.1 mouse_genomes_project 12 112451100 112451561 - MGP_BALBcJ_P0000067 Ighv7-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0035678.1 MGP_BALBcJ_G0019977.1 mouse_genomes_project 12 100711241 100749506 - MGP_BALBcJ_P0035678 Gm28051 protein_coding protein_coding MGP_BALBcJ_T0009867.1 MGP_BALBcJ_G0007992.1 mouse_genomes_project 12 108139946 108140026 + Mir412 miRNA miRNA MGP_BALBcJ_T0012797.1 MGP_BALBcJ_G0010894.1 mouse_genomes_project 12 60405861 60406874 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012806.1 MGP_BALBcJ_G0010903.1 mouse_genomes_project 12 77795057 77795952 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034508.1 MGP_BALBcJ_G0019589.1 mouse_genomes_project 12 26050925 26058096 + MGP_BALBcJ_P0034508 Adi1 protein_coding protein_coding MGP_BALBcJ_T0034509.1 MGP_BALBcJ_G0019589.1 mouse_genomes_project 12 26051178 26057650 + MGP_BALBcJ_P0034509 Adi1 protein_coding protein_coding MGP_BALBcJ_T0034510.1 MGP_BALBcJ_G0019589.1 mouse_genomes_project 12 26053212 26055115 + Adi1 protein_coding processed_transcript MGP_BALBcJ_T0034444.1 MGP_BALBcJ_G0019562.1 mouse_genomes_project 12 14499363 14581790 + MGP_BALBcJ_P0034444 Nol10 protein_coding protein_coding MGP_BALBcJ_T0035152.1 MGP_BALBcJ_G0019828.1 mouse_genomes_project 12 78337626 78377960 + MGP_BALBcJ_P0035152 Slc39a9 protein_coding protein_coding MGP_BALBcJ_T0100564.1 MGP_BALBcJ_G0038600.1 mouse_genomes_project 12 28600541 28600671 - Gm24613 snoRNA snoRNA MGP_BALBcJ_T0100579.1 MGP_BALBcJ_G0038615.1 mouse_genomes_project 12 57105247 57105378 - Gm24377 snoRNA snoRNA MGP_BALBcJ_T0034669.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37562436 37584012 - MGP_BALBcJ_P0034669 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0034670.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37564000 37567906 - MGP_BALBcJ_P0034670 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0034671.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37564189 37565512 - Ifrd1 protein_coding retained_intron MGP_BALBcJ_T0034672.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37564788 37583785 - MGP_BALBcJ_P0034672 Ifrd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034673.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37574823 37609086 - MGP_BALBcJ_P0034673 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0034674.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37574880 37578357 - MGP_BALBcJ_P0034674 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0034675.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37574937 37609493 - MGP_BALBcJ_P0034675 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0034676.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37576205 37584008 - Ifrd1 protein_coding retained_intron MGP_BALBcJ_T0034677.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37577032 37609511 - MGP_BALBcJ_P0034677 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0034678.1 MGP_BALBcJ_G0019646.1 mouse_genomes_project 12 37578001 37583972 - MGP_BALBcJ_P0034678 Ifrd1 protein_coding protein_coding MGP_BALBcJ_T0035380.1 MGP_BALBcJ_G0019890.1 mouse_genomes_project 12 82976278 82995588 - MGP_BALBcJ_P0035380 Rps6kl1 protein_coding protein_coding MGP_BALBcJ_T0034907.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67391178 67481764 - Map4k5 protein_coding processed_transcript MGP_BALBcJ_T0034908.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67391178 67481670 - MGP_BALBcJ_P0034908 Map4k5 protein_coding protein_coding MGP_BALBcJ_T0034909.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67391178 67481861 - MGP_BALBcJ_P0034909 Map4k5 protein_coding protein_coding MGP_BALBcJ_T0034910.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67391187 67481824 - MGP_BALBcJ_P0034910 Map4k5 protein_coding protein_coding MGP_BALBcJ_T0034911.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67391187 67481764 - MGP_BALBcJ_P0034911 Map4k5 protein_coding protein_coding MGP_BALBcJ_T0034912.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67391189 67406373 - Map4k5 protein_coding retained_intron MGP_BALBcJ_T0034913.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67405701 67406778 - Map4k5 protein_coding processed_transcript MGP_BALBcJ_T0034914.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67432780 67462720 - Map4k5 protein_coding retained_intron MGP_BALBcJ_T0034915.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67436453 67481784 - Map4k5 protein_coding retained_intron MGP_BALBcJ_T0034916.1 MGP_BALBcJ_G0019740.1 mouse_genomes_project 12 67436923 67444473 - Map4k5 protein_coding retained_intron MGP_BALBcJ_T0034729.1 MGP_BALBcJ_G0019669.1 mouse_genomes_project 12 49301528 49320365 - MGP_BALBcJ_P0034729 Dtd2 protein_coding protein_coding MGP_BALBcJ_T0034730.1 MGP_BALBcJ_G0019669.1 mouse_genomes_project 12 49310996 49320365 - MGP_BALBcJ_P0034730 Dtd2 protein_coding protein_coding MGP_BALBcJ_T0101619.1 MGP_BALBcJ_G0039634.1 mouse_genomes_project 12 99134042 99137707 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101620.1 MGP_BALBcJ_G0039634.1 mouse_genomes_project 12 99137535 99138187 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0034470.1 MGP_BALBcJ_G0019572.1 mouse_genomes_project 12 21839803 21901259 + MGP_BALBcJ_P0034470 Taf1b protein_coding unknown_likely_coding MGP_BALBcJ_T0034957.1 MGP_BALBcJ_G0019753.1 mouse_genomes_project 12 68715444 68727596 + MGP_BALBcJ_P0034957 Tomm20l protein_coding protein_coding MGP_BALBcJ_T0035583.1 MGP_BALBcJ_G0019950.1 mouse_genomes_project 12 96755369 96882712 - MGP_BALBcJ_P0035583 Eml5 protein_coding protein_coding MGP_BALBcJ_T0035584.1 MGP_BALBcJ_G0019950.1 mouse_genomes_project 12 96770348 96882256 - MGP_BALBcJ_P0035584 Eml5 protein_coding unknown_likely_coding MGP_BALBcJ_T0035431.1 MGP_BALBcJ_G0019904.1 mouse_genomes_project 12 83908122 83929942 - MGP_BALBcJ_P0035431 Tgfb3 protein_coding protein_coding MGP_BALBcJ_T0100610.1 MGP_BALBcJ_G0038646.1 mouse_genomes_project 12 108050998 108051070 + Gm26922 snoRNA snoRNA MGP_BALBcJ_T0000850.1 MGP_BALBcJ_G0000782.1 mouse_genomes_project 12 44482036 44482502 + TEC TEC MGP_BALBcJ_T0034805.1 MGP_BALBcJ_G0019702.1 mouse_genomes_project 12 55659301 55661419 + MGP_BALBcJ_P0034805 Sstr1 protein_coding protein_coding MGP_BALBcJ_T0034806.1 MGP_BALBcJ_G0019702.1 mouse_genomes_project 12 55659333 55661972 + MGP_BALBcJ_P0034806 Sstr1 protein_coding protein_coding MGP_BALBcJ_T0034551.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28730272 28792311 + MGP_BALBcJ_P0034551 Slc26a3 protein_coding protein_coding MGP_BALBcJ_T0034552.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28779575 28815421 + MGP_BALBcJ_P0034552 Slc26a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034553.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28779577 28815843 + MGP_BALBcJ_P0034553 Slc26a3 protein_coding protein_coding MGP_BALBcJ_T0034554.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28779577 28794192 + MGP_BALBcJ_P0034554 Slc26a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034555.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28779591 28794209 + Slc26a3 protein_coding retained_intron MGP_BALBcJ_T0034556.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28788768 28796390 + Slc26a3 protein_coding retained_intron MGP_BALBcJ_T0034557.1 MGP_BALBcJ_G0019604.1 mouse_genomes_project 12 28812831 28813777 + MGP_BALBcJ_P0034557 Slc26a3 protein_coding protein_coding MGP_BALBcJ_T0035718.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430790 101437491 + MGP_BALBcJ_P0035718 Ifi27 protein_coding protein_coding MGP_BALBcJ_T0035719.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430790 101437491 + MGP_BALBcJ_P0035719 Ifi27 protein_coding protein_coding MGP_BALBcJ_T0035720.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430790 101437491 + MGP_BALBcJ_P0035720 Ifi27 protein_coding protein_coding MGP_BALBcJ_T0035721.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430791 101437523 + MGP_BALBcJ_P0035721 Ifi27 protein_coding protein_coding MGP_BALBcJ_T0035722.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430824 101434920 + Ifi27 protein_coding retained_intron MGP_BALBcJ_T0035723.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430838 101437523 + MGP_BALBcJ_P0035723 Ifi27 protein_coding protein_coding MGP_BALBcJ_T0035724.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430864 101434257 + Ifi27 protein_coding retained_intron MGP_BALBcJ_T0035725.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101430871 101434812 + MGP_BALBcJ_P0035725 Ifi27 protein_coding protein_coding MGP_BALBcJ_T0035726.1 MGP_BALBcJ_G0019992.1 mouse_genomes_project 12 101434910 101437523 + Ifi27 protein_coding retained_intron MGP_BALBcJ_T0034399.1 MGP_BALBcJ_G0019550.1 mouse_genomes_project 12 11284230 11288670 - MGP_BALBcJ_P0034399 Fam84a protein_coding protein_coding MGP_BALBcJ_T0000090.1 MGP_BALBcJ_G0000068.1 mouse_genomes_project 12 113041705 113042007 - MGP_BALBcJ_P0000090 Ighv13-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0000091.1 MGP_BALBcJ_G0000068.1 mouse_genomes_project 12 113041705 113042165 - MGP_BALBcJ_P0000091 Ighv13-2 IG_V_gene IG_V_gene MGP_BALBcJ_T0034895.1 MGP_BALBcJ_G0019735.1 mouse_genomes_project 12 67145757 67152392 - MGP_BALBcJ_P0034895 Vcpkmt protein_coding unknown_likely_coding MGP_BALBcJ_T0034896.1 MGP_BALBcJ_G0019735.1 mouse_genomes_project 12 67146638 67152434 - MGP_BALBcJ_P0034896 Vcpkmt protein_coding protein_coding MGP_BALBcJ_T0035688.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100941084 101179008 + MGP_BALBcJ_P0035688 Unc79 protein_coding protein_coding MGP_BALBcJ_T0035689.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100942046 101178620 + MGP_BALBcJ_P0035689 Unc79 protein_coding protein_coding MGP_BALBcJ_T0035690.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100983797 101178620 + MGP_BALBcJ_P0035690 Unc79 protein_coding unknown_likely_coding MGP_BALBcJ_T0035691.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100994349 100998738 + Unc79 protein_coding retained_intron MGP_BALBcJ_T0035692.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100995120 101053053 + MGP_BALBcJ_P0035692 Unc79 protein_coding protein_coding MGP_BALBcJ_T0035693.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100995171 101179005 + MGP_BALBcJ_P0035693 Unc79 protein_coding protein_coding MGP_BALBcJ_T0035694.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 100995228 101179072 + MGP_BALBcJ_P0035694 Unc79 protein_coding protein_coding MGP_BALBcJ_T0035695.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 101052703 101064992 + Unc79 protein_coding retained_intron MGP_BALBcJ_T0035696.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 101089855 101106031 + MGP_BALBcJ_P0035696 Unc79 protein_coding protein_coding MGP_BALBcJ_T0035697.1 MGP_BALBcJ_G0019985.1 mouse_genomes_project 12 101129267 101141010 + MGP_BALBcJ_P0035697 Unc79 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006371.1 MGP_BALBcJ_G0005314.1 mouse_genomes_project 12 24502911 24522444 - Gm9866 lincRNA lincRNA MGP_BALBcJ_T0006372.1 MGP_BALBcJ_G0005314.1 mouse_genomes_project 12 24502917 24522766 - Gm9866 lincRNA lincRNA MGP_BALBcJ_T0006373.1 MGP_BALBcJ_G0005314.1 mouse_genomes_project 12 24504013 24522579 - Gm9866 lincRNA lincRNA MGP_BALBcJ_T0006374.1 MGP_BALBcJ_G0005314.1 mouse_genomes_project 12 24507532 24522595 - Gm9866 lincRNA lincRNA MGP_BALBcJ_T0034581.1 MGP_BALBcJ_G0019612.1 mouse_genomes_project 12 29311489 29407066 - MGP_BALBcJ_P0034581 Prkar2b protein_coding protein_coding MGP_BALBcJ_T0034858.1 MGP_BALBcJ_G0019720.1 mouse_genomes_project 12 62671990 62713996 - Mis18bp1 protein_coding retained_intron MGP_BALBcJ_T0034859.1 MGP_BALBcJ_G0019720.1 mouse_genomes_project 12 62671990 62713972 - MGP_BALBcJ_P0034859 Mis18bp1 protein_coding protein_coding MGP_BALBcJ_T0034860.1 MGP_BALBcJ_G0019720.1 mouse_genomes_project 12 62675581 62677977 - Mis18bp1 protein_coding retained_intron MGP_BALBcJ_T0034861.1 MGP_BALBcJ_G0019720.1 mouse_genomes_project 12 62692574 62694891 - Mis18bp1 protein_coding processed_transcript MGP_BALBcJ_T0034862.1 MGP_BALBcJ_G0019720.1 mouse_genomes_project 12 62694514 62713958 - Mis18bp1 protein_coding processed_transcript MGP_BALBcJ_T0034863.1 MGP_BALBcJ_G0019720.1 mouse_genomes_project 12 62695819 62713970 - Mis18bp1 protein_coding retained_intron MGP_BALBcJ_T0035668.1 MGP_BALBcJ_G0019973.1 mouse_genomes_project 12 100367613 100390691 - MGP_BALBcJ_P0035668 Lgmn protein_coding protein_coding MGP_BALBcJ_T0035669.1 MGP_BALBcJ_G0019973.1 mouse_genomes_project 12 100367627 100403499 - MGP_BALBcJ_P0035669 Lgmn protein_coding protein_coding MGP_BALBcJ_T0035670.1 MGP_BALBcJ_G0019973.1 mouse_genomes_project 12 100373634 100379668 - Lgmn protein_coding retained_intron MGP_BALBcJ_T0006472.1 MGP_BALBcJ_G0005379.1 mouse_genomes_project 12 109257806 109261049 + 4921507G05Rik lincRNA lincRNA MGP_BALBcJ_T0003393.1 MGP_BALBcJ_G0003116.1 mouse_genomes_project 12 82747202 82748293 + Gm17139 antisense antisense MGP_BALBcJ_T0102174.1 MGP_BALBcJ_G0039991.1 mouse_genomes_project 12 46218009 46218249 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000025.1 MGP_BALBcJ_G0000019.1 mouse_genomes_project 12 111960243 111960272 - MGP_BALBcJ_P0000025 Ighd5-8 IG_D_gene IG_D_gene MGP_BALBcJ_T0006388.1 MGP_BALBcJ_G0005326.1 mouse_genomes_project 12 49893394 49895769 - 1700031P21Rik lincRNA lincRNA MGP_BALBcJ_T0006389.1 MGP_BALBcJ_G0005326.1 mouse_genomes_project 12 49895004 49895765 - 1700031P21Rik lincRNA lincRNA MGP_BALBcJ_T0006390.1 MGP_BALBcJ_G0005326.1 mouse_genomes_project 12 49895022 49895766 - 1700031P21Rik lincRNA lincRNA MGP_BALBcJ_T0012779.1 MGP_BALBcJ_G0010876.1 mouse_genomes_project 12 28373157 28374734 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036049.1 MGP_BALBcJ_G0020113.1 mouse_genomes_project 12 111624278 111629213 + MGP_BALBcJ_P0036049 Crip2 protein_coding protein_coding MGP_BALBcJ_T0036050.1 MGP_BALBcJ_G0020113.1 mouse_genomes_project 12 111624278 111628810 + MGP_BALBcJ_P0036050 Crip2 protein_coding protein_coding MGP_BALBcJ_T0036051.1 MGP_BALBcJ_G0020113.1 mouse_genomes_project 12 111627041 111628676 + Crip2 protein_coding retained_intron MGP_BALBcJ_T0036052.1 MGP_BALBcJ_G0020113.1 mouse_genomes_project 12 111627176 111627938 + Crip2 protein_coding retained_intron MGP_BALBcJ_T0036053.1 MGP_BALBcJ_G0020113.1 mouse_genomes_project 12 111627792 111628411 + Crip2 protein_coding retained_intron MGP_BALBcJ_T0009878.1 MGP_BALBcJ_G0008003.1 mouse_genomes_project 12 111399738 111399797 - Mir6941 miRNA miRNA MGP_BALBcJ_T0009784.1 MGP_BALBcJ_G0007909.1 mouse_genomes_project 12 78081796 78081861 - Mir1843a miRNA miRNA MGP_BALBcJ_T0099342.1 MGP_BALBcJ_G0037378.1 mouse_genomes_project 12 76793549 76793654 - Gm27297 snRNA snRNA MGP_BALBcJ_T0034640.1 MGP_BALBcJ_G0019639.1 mouse_genomes_project 12 34465843 34526328 + MGP_BALBcJ_P0034640 Meox2 protein_coding protein_coding MGP_BALBcJ_T0006476.1 MGP_BALBcJ_G0005382.1 mouse_genomes_project 12 109852609 109856682 - Gm10425 lincRNA lincRNA MGP_BALBcJ_T0034960.1 MGP_BALBcJ_G0019755.1 mouse_genomes_project 12 68741213 68845341 + MGP_BALBcJ_P0034960 2700049A03Rik protein_coding protein_coding MGP_BALBcJ_T0034961.1 MGP_BALBcJ_G0019755.1 mouse_genomes_project 12 68741213 68845341 + MGP_BALBcJ_P0034961 2700049A03Rik protein_coding protein_coding MGP_BALBcJ_T0034962.1 MGP_BALBcJ_G0019755.1 mouse_genomes_project 12 68755285 68759735 + MGP_BALBcJ_P0034962 2700049A03Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034963.1 MGP_BALBcJ_G0019755.1 mouse_genomes_project 12 68777816 68845337 + MGP_BALBcJ_P0034963 2700049A03Rik protein_coding protein_coding MGP_BALBcJ_T0011311.1 MGP_BALBcJ_G0009436.1 mouse_genomes_project 12 84519634 84519719 + Gm27993 misc_RNA misc_RNA MGP_BALBcJ_T0017265.1 MGP_BALBcJ_G0015170.1 mouse_genomes_project 12 79237928 79257806 + 6530401F13Rik processed_transcript processed_transcript MGP_BALBcJ_T0003368.1 MGP_BALBcJ_G0003095.1 mouse_genomes_project 12 30546466 30562972 - antisense antisense MGP_BALBcJ_T0035698.1 MGP_BALBcJ_G0019986.1 mouse_genomes_project 12 101191914 101197901 - Prima1 protein_coding processed_transcript MGP_BALBcJ_T0035699.1 MGP_BALBcJ_G0019986.1 mouse_genomes_project 12 101191914 101237139 - MGP_BALBcJ_P0035699 Prima1 protein_coding protein_coding MGP_BALBcJ_T0035700.1 MGP_BALBcJ_G0019986.1 mouse_genomes_project 12 101191914 101237135 - MGP_BALBcJ_P0035700 Prima1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035701.1 MGP_BALBcJ_G0019986.1 mouse_genomes_project 12 101192274 101237117 - MGP_BALBcJ_P0035701 Prima1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035702.1 MGP_BALBcJ_G0019986.1 mouse_genomes_project 12 101230627 101231013 - Prima1 protein_coding processed_transcript MGP_BALBcJ_T0034382.1 MGP_BALBcJ_G0019537.1 mouse_genomes_project 12 7477112 7481865 + MGP_BALBcJ_P0034382 Rdh14 protein_coding protein_coding MGP_BALBcJ_T0006365.1 MGP_BALBcJ_G0005308.1 mouse_genomes_project 12 6625363 6630679 - 1700022H16Rik lincRNA lincRNA MGP_BALBcJ_T0034958.1 MGP_BALBcJ_G0019754.1 mouse_genomes_project 12 68727546 68741041 - MGP_BALBcJ_P0034958 Timm9 protein_coding protein_coding MGP_BALBcJ_T0034959.1 MGP_BALBcJ_G0019754.1 mouse_genomes_project 12 68727546 68741041 - MGP_BALBcJ_P0034959 Timm9 protein_coding protein_coding MGP_BALBcJ_T0034880.1 MGP_BALBcJ_G0019726.1 mouse_genomes_project 12 66757742 66760356 + MGP_BALBcJ_P0034880 Mgat2 protein_coding protein_coding MGP_BALBcJ_T0035502.1 MGP_BALBcJ_G0019925.1 mouse_genomes_project 12 85337593 85343607 + MGP_BALBcJ_P0035502 Slirp protein_coding protein_coding MGP_BALBcJ_T0035503.1 MGP_BALBcJ_G0019925.1 mouse_genomes_project 12 85337611 85343611 + MGP_BALBcJ_P0035503 Slirp protein_coding protein_coding MGP_BALBcJ_T0035504.1 MGP_BALBcJ_G0019925.1 mouse_genomes_project 12 85337617 85343591 + MGP_BALBcJ_P0035504 Slirp protein_coding protein_coding MGP_BALBcJ_T0034924.1 MGP_BALBcJ_G0019745.1 mouse_genomes_project 12 67747221 67776702 + Abhd12b protein_coding retained_intron MGP_BALBcJ_T0034925.1 MGP_BALBcJ_G0019745.1 mouse_genomes_project 12 67747236 67777242 + MGP_BALBcJ_P0034925 Abhd12b protein_coding protein_coding MGP_BALBcJ_T0034926.1 MGP_BALBcJ_G0019745.1 mouse_genomes_project 12 67747236 67777242 + MGP_BALBcJ_P0034926 Abhd12b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034927.1 MGP_BALBcJ_G0019745.1 mouse_genomes_project 12 67747236 67777242 + MGP_BALBcJ_P0034927 Abhd12b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034928.1 MGP_BALBcJ_G0019745.1 mouse_genomes_project 12 67747236 67777242 + MGP_BALBcJ_P0034928 Abhd12b protein_coding protein_coding MGP_BALBcJ_T0034929.1 MGP_BALBcJ_G0019745.1 mouse_genomes_project 12 67775402 67776702 + Abhd12b protein_coding retained_intron MGP_BALBcJ_T0006383.1 MGP_BALBcJ_G0005322.1 mouse_genomes_project 12 34455805 34464091 - Gm29007 lincRNA lincRNA MGP_BALBcJ_T0035933.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109868035 109880588 + MGP_BALBcJ_P0035933 Tnfaip2 protein_coding protein_coding MGP_BALBcJ_T0035934.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109868224 109880248 + MGP_BALBcJ_P0035934 Tnfaip2 protein_coding protein_coding MGP_BALBcJ_T0035935.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109868228 109880248 + Tnfaip2 protein_coding retained_intron MGP_BALBcJ_T0035936.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109868228 109874152 + MGP_BALBcJ_P0035936 Tnfaip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035937.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109869890 109871078 + MGP_BALBcJ_P0035937 Tnfaip2 protein_coding protein_coding MGP_BALBcJ_T0035938.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109870564 109879395 + MGP_BALBcJ_P0035938 Tnfaip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035939.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109871650 109879395 + MGP_BALBcJ_P0035939 Tnfaip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035940.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109873699 109874876 + Tnfaip2 protein_coding retained_intron MGP_BALBcJ_T0035941.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109875083 109877035 + Tnfaip2 protein_coding retained_intron MGP_BALBcJ_T0035942.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109875438 109879329 + MGP_BALBcJ_P0035942 Tnfaip2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035943.1 MGP_BALBcJ_G0020074.1 mouse_genomes_project 12 109876084 109879196 + Tnfaip2 protein_coding retained_intron MGP_BALBcJ_T0035781.1 MGP_BALBcJ_G0020023.1 mouse_genomes_project 12 103213184 103221401 + MGP_BALBcJ_P0035781 Glrx5 protein_coding protein_coding MGP_BALBcJ_T0035764.1 MGP_BALBcJ_G0020011.1 mouse_genomes_project 12 102355127 102361355 + MGP_BALBcJ_P0035764 protein_coding protein_coding MGP_BALBcJ_T0035765.1 MGP_BALBcJ_G0020011.1 mouse_genomes_project 12 102355887 102356530 + protein_coding retained_intron MGP_BALBcJ_T0098482.1 MGP_BALBcJ_G0036536.1 mouse_genomes_project 12 66200223 66200341 + n-R5s61 rRNA rRNA MGP_BALBcJ_T0035342.1 MGP_BALBcJ_G0019878.1 mouse_genomes_project 12 82426807 82441750 - MGP_BALBcJ_P0035342 Abcd4 protein_coding protein_coding MGP_BALBcJ_T0036090.1 MGP_BALBcJ_G0020124.1 mouse_genomes_project 12 116750606 116785898 + MGP_BALBcJ_P0036090 Cdca7l protein_coding protein_coding MGP_BALBcJ_T0036091.1 MGP_BALBcJ_G0020124.1 mouse_genomes_project 12 116750975 116780951 + MGP_BALBcJ_P0036091 Cdca7l protein_coding protein_coding MGP_BALBcJ_T0036092.1 MGP_BALBcJ_G0020124.1 mouse_genomes_project 12 116750979 116782823 + MGP_BALBcJ_P0036092 Cdca7l protein_coding protein_coding MGP_BALBcJ_T0009847.1 MGP_BALBcJ_G0007972.1 mouse_genomes_project 12 108120425 108120545 - Gm25252 miRNA miRNA MGP_BALBcJ_T0035786.1 MGP_BALBcJ_G0020027.1 mouse_genomes_project 12 103453908 103471293 + MGP_BALBcJ_P0035786 Tcl1b3 protein_coding protein_coding MGP_BALBcJ_T0034747.1 MGP_BALBcJ_G0019679.1 mouse_genomes_project 12 52196638 52200694 - MGP_BALBcJ_P0034747 Cfl2 protein_coding protein_coding MGP_BALBcJ_T0035035.1 MGP_BALBcJ_G0019783.1 mouse_genomes_project 12 72968900 73056078 + MGP_BALBcJ_P0035035 Rhoj protein_coding protein_coding MGP_BALBcJ_T0035036.1 MGP_BALBcJ_G0019783.1 mouse_genomes_project 12 72968900 73059578 + MGP_BALBcJ_P0035036 Rhoj protein_coding protein_coding MGP_BALBcJ_T0035037.1 MGP_BALBcJ_G0019783.1 mouse_genomes_project 12 72968900 73053939 + MGP_BALBcJ_P0035037 Rhoj protein_coding protein_coding MGP_BALBcJ_T0035038.1 MGP_BALBcJ_G0019783.1 mouse_genomes_project 12 72969251 73037014 + Rhoj protein_coding retained_intron MGP_BALBcJ_T0035039.1 MGP_BALBcJ_G0019783.1 mouse_genomes_project 12 72969459 73058334 + MGP_BALBcJ_P0035039 Rhoj protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034710.1 MGP_BALBcJ_G0019659.1 mouse_genomes_project 12 46662892 46671936 + MGP_BALBcJ_P0034710 Gm43517 protein_coding protein_coding MGP_BALBcJ_T0034864.1 MGP_BALBcJ_G0019721.1 mouse_genomes_project 12 62768622 62774212 + MGP_BALBcJ_P0034864 Wdr20rt protein_coding protein_coding MGP_BALBcJ_T0009814.1 MGP_BALBcJ_G0007939.1 mouse_genomes_project 12 107985154 107985243 + Mir3070b miRNA miRNA MGP_BALBcJ_T0006379.1 MGP_BALBcJ_G0005319.1 mouse_genomes_project 12 30159969 30164970 + Gdap10 lincRNA lincRNA MGP_BALBcJ_T0035476.1 MGP_BALBcJ_G0019919.1 mouse_genomes_project 12 85104615 85116899 - MGP_BALBcJ_P0035476 Noxred1 protein_coding protein_coding MGP_BALBcJ_T0006384.1 MGP_BALBcJ_G0005323.1 mouse_genomes_project 12 46667508 46685765 + 3110039M20Rik lincRNA lincRNA MGP_BALBcJ_T0006385.1 MGP_BALBcJ_G0005323.1 mouse_genomes_project 12 46668515 46685543 + 3110039M20Rik lincRNA lincRNA MGP_BALBcJ_T0035556.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89731440 89774856 - MGP_BALBcJ_P0035556 Sel1l protein_coding protein_coding MGP_BALBcJ_T0035557.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89731440 89774856 - MGP_BALBcJ_P0035557 Sel1l protein_coding protein_coding MGP_BALBcJ_T0035558.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89731462 89739664 - Sel1l protein_coding processed_transcript MGP_BALBcJ_T0035559.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89732328 89774828 - MGP_BALBcJ_P0035559 Sel1l protein_coding protein_coding MGP_BALBcJ_T0035560.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89734350 89774829 - Sel1l protein_coding retained_intron MGP_BALBcJ_T0035561.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89741207 89743952 - Sel1l protein_coding retained_intron MGP_BALBcJ_T0035562.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89745684 89774829 - Sel1l protein_coding retained_intron MGP_BALBcJ_T0035563.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89750581 89757636 - Sel1l protein_coding retained_intron MGP_BALBcJ_T0035564.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89757873 89774838 - Sel1l protein_coding retained_intron MGP_BALBcJ_T0035565.1 MGP_BALBcJ_G0019942.1 mouse_genomes_project 12 89767156 89774839 - Sel1l protein_coding retained_intron MGP_BALBcJ_T0035612.1 MGP_BALBcJ_G0019956.1 mouse_genomes_project 12 98099077 98112079 + MGP_BALBcJ_P0035612 Psmc1 protein_coding protein_coding MGP_BALBcJ_T0035266.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81598303 81725943 - MGP_BALBcJ_P0035266 Numb protein_coding protein_coding MGP_BALBcJ_T0035267.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81598305 81680839 - MGP_BALBcJ_P0035267 Numb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035268.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81598340 81725853 - MGP_BALBcJ_P0035268 Numb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035269.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81599708 81646131 - MGP_BALBcJ_P0035269 Numb protein_coding protein_coding MGP_BALBcJ_T0035270.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81599708 81646131 - MGP_BALBcJ_P0035270 Numb protein_coding protein_coding MGP_BALBcJ_T0035271.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81599708 81646131 - MGP_BALBcJ_P0035271 Numb protein_coding protein_coding MGP_BALBcJ_T0035272.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81608215 81725876 - MGP_BALBcJ_P0035272 Numb protein_coding protein_coding MGP_BALBcJ_T0035273.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81612361 81725865 - MGP_BALBcJ_P0035273 Numb protein_coding protein_coding MGP_BALBcJ_T0035274.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81612432 81725892 - MGP_BALBcJ_P0035274 Numb protein_coding protein_coding MGP_BALBcJ_T0035275.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81615123 81725899 - MGP_BALBcJ_P0035275 Numb protein_coding protein_coding MGP_BALBcJ_T0035276.1 MGP_BALBcJ_G0019855.1 mouse_genomes_project 12 81635414 81680827 - Numb protein_coding retained_intron MGP_BALBcJ_T0034857.1 MGP_BALBcJ_G0019719.1 mouse_genomes_project 12 62615135 62671311 + MGP_BALBcJ_P0034857 Fancm protein_coding protein_coding MGP_BALBcJ_T0035569.1 MGP_BALBcJ_G0019945.1 mouse_genomes_project 12 96240001 96248201 + MGP_BALBcJ_P0035569 Gpr65 protein_coding protein_coding MGP_BALBcJ_T0035379.1 MGP_BALBcJ_G0019889.1 mouse_genomes_project 12 82947702 82974774 + MGP_BALBcJ_P0035379 Dlst protein_coding protein_coding MGP_BALBcJ_T0098488.1 MGP_BALBcJ_G0036542.1 mouse_genomes_project 12 102164630 102165360 + Gm23289 rRNA rRNA MGP_BALBcJ_T0000032.1 MGP_BALBcJ_G0000025.1 mouse_genomes_project 12 111987626 111987636 - IG_D_pseudogene IG_D_pseudogene MGP_BALBcJ_T0035080.1 MGP_BALBcJ_G0019797.1 mouse_genomes_project 12 74125763 74132540 + MGP_BALBcJ_P0035080 Gm10451 protein_coding protein_coding MGP_BALBcJ_T0035103.1 MGP_BALBcJ_G0019804.1 mouse_genomes_project 12 74617555 74644181 - MGP_BALBcJ_P0035103 Max protein_coding protein_coding MGP_BALBcJ_T0035104.1 MGP_BALBcJ_G0019804.1 mouse_genomes_project 12 74617555 74644181 - MGP_BALBcJ_P0035104 Max protein_coding protein_coding MGP_BALBcJ_T0006386.1 MGP_BALBcJ_G0005324.1 mouse_genomes_project 12 46757469 46761341 - 1810007C17Rik lincRNA lincRNA MGP_BALBcJ_T0035836.1 MGP_BALBcJ_G0020043.1 mouse_genomes_project 12 106646353 106670148 + MGP_BALBcJ_P0035836 Hhipl1 protein_coding protein_coding MGP_BALBcJ_T0098485.1 MGP_BALBcJ_G0036539.1 mouse_genomes_project 12 83566873 83566992 - n-R5s64 rRNA rRNA MGP_BALBcJ_T0035026.1 MGP_BALBcJ_G0019778.1 mouse_genomes_project 12 71559314 71584492 + MGP_BALBcJ_P0035026 Hif1a protein_coding protein_coding MGP_BALBcJ_T0035027.1 MGP_BALBcJ_G0019778.1 mouse_genomes_project 12 71559700 71598947 + MGP_BALBcJ_P0035027 Hif1a protein_coding protein_coding MGP_BALBcJ_T0035028.1 MGP_BALBcJ_G0019778.1 mouse_genomes_project 12 71578017 71579948 + Hif1a protein_coding retained_intron MGP_BALBcJ_T0035029.1 MGP_BALBcJ_G0019778.1 mouse_genomes_project 12 71589085 71591297 + Hif1a protein_coding processed_transcript MGP_BALBcJ_T0035864.1 MGP_BALBcJ_G0020052.1 mouse_genomes_project 12 107254733 107387435 + MGP_BALBcJ_P0035864 Wdr25 protein_coding protein_coding MGP_BALBcJ_T0035865.1 MGP_BALBcJ_G0020052.1 mouse_genomes_project 12 107254778 107387308 + MGP_BALBcJ_P0035865 Wdr25 protein_coding protein_coding MGP_BALBcJ_T0035849.1 MGP_BALBcJ_G0020047.1 mouse_genomes_project 12 107036572 107052996 - MGP_BALBcJ_P0035849 Degs2 protein_coding protein_coding MGP_BALBcJ_T0035850.1 MGP_BALBcJ_G0020047.1 mouse_genomes_project 12 107040002 107052996 - MGP_BALBcJ_P0035850 Degs2 protein_coding protein_coding MGP_BALBcJ_T0035758.1 MGP_BALBcJ_G0020007.1 mouse_genomes_project 12 102192062 102201179 + MGP_BALBcJ_P0035758 Serpina3a protein_coding protein_coding MGP_BALBcJ_T0035759.1 MGP_BALBcJ_G0020007.1 mouse_genomes_project 12 102192117 102201092 + MGP_BALBcJ_P0035759 Serpina3a protein_coding protein_coding MGP_BALBcJ_T0035760.1 MGP_BALBcJ_G0020007.1 mouse_genomes_project 12 102195376 102200802 + MGP_BALBcJ_P0035760 Serpina3a protein_coding protein_coding MGP_BALBcJ_T0009852.1 MGP_BALBcJ_G0007977.1 mouse_genomes_project 12 108124777 108124892 - Gm44322 miRNA miRNA MGP_BALBcJ_T0100613.1 MGP_BALBcJ_G0038649.1 mouse_genomes_project 12 108054778 108054850 + Gm27604 snoRNA snoRNA MGP_BALBcJ_T0011303.1 MGP_BALBcJ_G0009428.1 mouse_genomes_project 12 53707150 53707435 - Gm24685 misc_RNA misc_RNA MGP_BALBcJ_T0035618.1 MGP_BALBcJ_G0019959.1 mouse_genomes_project 12 98295465 98415136 - MGP_BALBcJ_P0035618 Ttc7b protein_coding unknown_likely_coding MGP_BALBcJ_T0035619.1 MGP_BALBcJ_G0019959.1 mouse_genomes_project 12 98295468 98508831 - MGP_BALBcJ_P0035619 Ttc7b protein_coding protein_coding MGP_BALBcJ_T0036031.1 MGP_BALBcJ_G0020108.1 mouse_genomes_project 12 111458239 111460688 + MGP_BALBcJ_P0036031 Btbd6 protein_coding protein_coding MGP_BALBcJ_T0036032.1 MGP_BALBcJ_G0020108.1 mouse_genomes_project 12 111458320 111460688 + MGP_BALBcJ_P0036032 Btbd6 protein_coding protein_coding MGP_BALBcJ_T0098473.1 MGP_BALBcJ_G0036527.1 mouse_genomes_project 12 9768450 9768555 - Gm27952 rRNA rRNA MGP_BALBcJ_T0006414.1 MGP_BALBcJ_G0005346.1 mouse_genomes_project 12 85216262 85219237 + Gm26764 lincRNA lincRNA MGP_BALBcJ_T0034308.1 MGP_BALBcJ_G0019509.1 mouse_genomes_project 12 1150795 1383710 - MGP_BALBcJ_P0034308 Ncoa1 protein_coding protein_coding MGP_BALBcJ_T0012792.1 MGP_BALBcJ_G0010889.1 mouse_genomes_project 12 55109282 55109720 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098477.1 MGP_BALBcJ_G0036531.1 mouse_genomes_project 12 42666966 42667050 + Gm22076 rRNA rRNA MGP_BALBcJ_T0009845.1 MGP_BALBcJ_G0007970.1 mouse_genomes_project 12 108119887 108119971 + Mir654 miRNA miRNA MGP_BALBcJ_T0011315.1 MGP_BALBcJ_G0009440.1 mouse_genomes_project 12 101122918 101123080 + Gm27976 misc_RNA misc_RNA MGP_BALBcJ_T0035756.1 MGP_BALBcJ_G0020005.1 mouse_genomes_project 12 102083875 102099869 - MGP_BALBcJ_P0035756 Serpina12 protein_coding protein_coding MGP_BALBcJ_T0003371.1 MGP_BALBcJ_G0003098.1 mouse_genomes_project 12 37570330 37571917 - Gm17024 antisense antisense MGP_BALBcJ_T0035235.1 MGP_BALBcJ_G0019849.1 mouse_genomes_project 12 81002208 81145846 - MGP_BALBcJ_P0035235 Dpf3 protein_coding protein_coding MGP_BALBcJ_T0035236.1 MGP_BALBcJ_G0019849.1 mouse_genomes_project 12 81002214 81281879 - MGP_BALBcJ_P0035236 Dpf3 protein_coding protein_coding MGP_BALBcJ_T0035237.1 MGP_BALBcJ_G0019849.1 mouse_genomes_project 12 81048396 81281871 - MGP_BALBcJ_P0035237 Dpf3 protein_coding protein_coding MGP_BALBcJ_T0035238.1 MGP_BALBcJ_G0019849.1 mouse_genomes_project 12 81049833 81085300 - MGP_BALBcJ_P0035238 Dpf3 protein_coding protein_coding MGP_BALBcJ_T0035239.1 MGP_BALBcJ_G0019849.1 mouse_genomes_project 12 81058538 81281871 - MGP_BALBcJ_P0035239 Dpf3 protein_coding protein_coding MGP_BALBcJ_T0035240.1 MGP_BALBcJ_G0019849.1 mouse_genomes_project 12 81058655 81233456 - MGP_BALBcJ_P0035240 Dpf3 protein_coding protein_coding MGP_BALBcJ_T0034619.1 MGP_BALBcJ_G0019627.1 mouse_genomes_project 12 32382666 32489237 + MGP_BALBcJ_P0034619 Snx13 protein_coding protein_coding MGP_BALBcJ_T0034620.1 MGP_BALBcJ_G0019627.1 mouse_genomes_project 12 32382677 32474884 + MGP_BALBcJ_P0034620 Snx13 protein_coding protein_coding MGP_BALBcJ_T0034505.1 MGP_BALBcJ_G0019586.1 mouse_genomes_project 12 25966061 25997390 - MGP_BALBcJ_P0034505 Colec11 protein_coding protein_coding MGP_BALBcJ_T0035912.1 MGP_BALBcJ_G0020064.1 mouse_genomes_project 12 109291283 109310022 - MGP_BALBcJ_P0035912 Cinp protein_coding protein_coding MGP_BALBcJ_T0000857.1 MGP_BALBcJ_G0000789.1 mouse_genomes_project 12 80908611 80909553 + TEC TEC MGP_BALBcJ_T0006415.1 MGP_BALBcJ_G0005347.1 mouse_genomes_project 12 85323399 85323532 - Gm29362 lincRNA lincRNA MGP_BALBcJ_T0009829.1 MGP_BALBcJ_G0007954.1 mouse_genomes_project 12 108107318 108107381 + Mir299a miRNA miRNA MGP_BALBcJ_T0035282.1 MGP_BALBcJ_G0019861.1 mouse_genomes_project 12 81841321 81847670 + MGP_BALBcJ_P0035282 Acot4 protein_coding protein_coding MGP_BALBcJ_T0035283.1 MGP_BALBcJ_G0019861.1 mouse_genomes_project 12 81841649 81845169 + Acot4 protein_coding retained_intron MGP_BALBcJ_T0035716.1 MGP_BALBcJ_G0019991.1 mouse_genomes_project 12 101404570 101422375 - MGP_BALBcJ_P0035716 Ddx24 protein_coding protein_coding MGP_BALBcJ_T0035717.1 MGP_BALBcJ_G0019991.1 mouse_genomes_project 12 101404570 101422462 - MGP_BALBcJ_P0035717 Ddx24 protein_coding protein_coding MGP_BALBcJ_T0099335.1 MGP_BALBcJ_G0037371.1 mouse_genomes_project 12 67155560 67155666 - Gm24449 snRNA snRNA MGP_BALBcJ_T0034307.1 MGP_BALBcJ_G0019508.1 mouse_genomes_project 12 1134736 1140779 + MGP_BALBcJ_P0034307 Ptrhd1 protein_coding protein_coding MGP_BALBcJ_T0035210.1 MGP_BALBcJ_G0019846.1 mouse_genomes_project 12 79945689 80227471 + MGP_BALBcJ_P0035210 Sipa1l1 protein_coding protein_coding MGP_BALBcJ_T0035211.1 MGP_BALBcJ_G0019846.1 mouse_genomes_project 12 80116454 80227472 + MGP_BALBcJ_P0035211 Sipa1l1 protein_coding unknown_likely_coding MGP_BALBcJ_T0100575.1 MGP_BALBcJ_G0038611.1 mouse_genomes_project 12 48381766 48381883 + Gm22088 snoRNA snoRNA MGP_BALBcJ_T0012807.1 MGP_BALBcJ_G0010904.1 mouse_genomes_project 12 79090709 79091021 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035171.1 MGP_BALBcJ_G0019833.1 mouse_genomes_project 12 78648085 78663387 - MGP_BALBcJ_P0035171 Slc10a1 protein_coding protein_coding MGP_BALBcJ_T0000243.1 MGP_BALBcJ_G0000184.1 mouse_genomes_project 12 112609532 112609830 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0034943.1 MGP_BALBcJ_G0019750.1 mouse_genomes_project 12 68521765 68554137 + MGP_BALBcJ_P0034943 Actr10 protein_coding protein_coding MGP_BALBcJ_T0000011.1 MGP_BALBcJ_G0000008.1 mouse_genomes_project 12 111853319 111854977 - MGP_BALBcJ_P0000011 Ighg3 IG_C_gene IG_C_gene MGP_BALBcJ_T0034624.1 MGP_BALBcJ_G0019629.1 mouse_genomes_project 12 33268100 33292629 + MGP_BALBcJ_P0034624 Agr3 protein_coding protein_coding MGP_BALBcJ_T0034625.1 MGP_BALBcJ_G0019629.1 mouse_genomes_project 12 33268102 33270852 + MGP_BALBcJ_P0034625 Agr3 protein_coding protein_coding MGP_BALBcJ_T0035201.1 MGP_BALBcJ_G0019841.1 mouse_genomes_project 12 79258933 79267718 - MGP_BALBcJ_P0035201 Adam21 protein_coding protein_coding MGP_BALBcJ_T0034318.1 MGP_BALBcJ_G0019516.1 mouse_genomes_project 12 1733771 1743653 + MGP_BALBcJ_P0034318 Sf3b6 protein_coding protein_coding MGP_BALBcJ_T0035516.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86778464 87319865 + Nrxn3 protein_coding retained_intron MGP_BALBcJ_T0035517.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86778467 86912091 + MGP_BALBcJ_P0035517 Nrxn3 protein_coding unknown_likely_coding MGP_BALBcJ_T0035518.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86778476 86909819 + Nrxn3 protein_coding retained_intron MGP_BALBcJ_T0035519.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86778574 88310015 + MGP_BALBcJ_P0035519 Nrxn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035520.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86778697 88310034 + MGP_BALBcJ_P0035520 Nrxn3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035521.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86780577 86853523 + Nrxn3 protein_coding processed_transcript MGP_BALBcJ_T0035522.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86781249 86853389 + Nrxn3 protein_coding processed_transcript MGP_BALBcJ_T0035523.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86852911 88312072 + MGP_BALBcJ_P0035523 Nrxn3 protein_coding protein_coding MGP_BALBcJ_T0035524.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 86853846 86912214 + Nrxn3 protein_coding processed_transcript MGP_BALBcJ_T0035525.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 87012766 87246086 + Nrxn3 protein_coding processed_transcript MGP_BALBcJ_T0035526.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 87012775 88310197 + MGP_BALBcJ_P0035526 Nrxn3 protein_coding protein_coding MGP_BALBcJ_T0035527.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 87251872 88309547 + MGP_BALBcJ_P0035527 Nrxn3 protein_coding protein_coding MGP_BALBcJ_T0035528.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 87774971 88310580 + MGP_BALBcJ_P0035528 Nrxn3 protein_coding protein_coding MGP_BALBcJ_T0035529.1 MGP_BALBcJ_G0019936.1 mouse_genomes_project 12 87774971 88310036 + MGP_BALBcJ_P0035529 Nrxn3 protein_coding protein_coding MGP_BALBcJ_T0012829.1 MGP_BALBcJ_G0010926.1 mouse_genomes_project 12 105209332 105209813 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009813.1 MGP_BALBcJ_G0007938.1 mouse_genomes_project 12 107984505 107984594 + Mir3070a miRNA miRNA MGP_BALBcJ_T0035489.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85311559 85315153 - Alkbh1 protein_coding processed_transcript MGP_BALBcJ_T0035490.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85311888 85337521 - MGP_BALBcJ_P0035490 Alkbh1 protein_coding protein_coding MGP_BALBcJ_T0035491.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85311910 85337497 - MGP_BALBcJ_P0035491 Alkbh1 protein_coding unknown_likely_coding MGP_BALBcJ_T0035492.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85313796 85337508 - MGP_BALBcJ_P0035492 Alkbh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035493.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85313796 85337510 - MGP_BALBcJ_P0035493 Alkbh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035494.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85313799 85337518 - MGP_BALBcJ_P0035494 Alkbh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035495.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85314525 85337510 - MGP_BALBcJ_P0035495 Alkbh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035496.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85314836 85325906 - MGP_BALBcJ_P0035496 Alkbh1 protein_coding protein_coding MGP_BALBcJ_T0035497.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85317145 85335418 - Alkbh1 protein_coding processed_transcript MGP_BALBcJ_T0035498.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85318961 85337515 - MGP_BALBcJ_P0035498 Alkbh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035499.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85318972 85337521 - Alkbh1 protein_coding retained_intron MGP_BALBcJ_T0035500.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85336364 85337699 - Alkbh1 protein_coding retained_intron MGP_BALBcJ_T0035501.1 MGP_BALBcJ_G0019924.1 mouse_genomes_project 12 85337192 85337600 - MGP_BALBcJ_P0035501 Alkbh1 protein_coding protein_coding MGP_BALBcJ_T0034941.1 MGP_BALBcJ_G0019749.1 mouse_genomes_project 12 68416412 68493515 + MGP_BALBcJ_P0034941 Frmd6 protein_coding protein_coding MGP_BALBcJ_T0034942.1 MGP_BALBcJ_G0019749.1 mouse_genomes_project 12 68455088 68493186 + MGP_BALBcJ_P0034942 Frmd6 protein_coding unknown_likely_coding MGP_BALBcJ_T0006416.1 MGP_BALBcJ_G0005348.1 mouse_genomes_project 12 88710230 88722822 + Gm26512 lincRNA lincRNA MGP_BALBcJ_T0000098.1 MGP_BALBcJ_G0000075.1 mouse_genomes_project 12 113213119 113213590 - MGP_BALBcJ_P0000098 Ighv1-7 IG_V_gene IG_V_gene MGP_BALBcJ_T0012828.1 MGP_BALBcJ_G0010925.1 mouse_genomes_project 12 104861920 104863444 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0034572.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29279348 29303574 - MGP_BALBcJ_P0034572 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034573.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29282474 29303262 - MGP_BALBcJ_P0034573 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034574.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29283898 29293493 - MGP_BALBcJ_P0034574 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034575.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29284009 29287889 - Hbp1 protein_coding retained_intron MGP_BALBcJ_T0034576.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29285918 29302647 - MGP_BALBcJ_P0034576 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034577.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29287427 29303209 - MGP_BALBcJ_P0034577 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034578.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29289545 29303260 - MGP_BALBcJ_P0034578 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034579.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29290131 29303249 - MGP_BALBcJ_P0034579 Hbp1 protein_coding protein_coding MGP_BALBcJ_T0034580.1 MGP_BALBcJ_G0019611.1 mouse_genomes_project 12 29292836 29303273 - Hbp1 protein_coding retained_intron MGP_BALBcJ_T0009882.1 MGP_BALBcJ_G0008007.1 mouse_genomes_project 12 115090057 115090178 - Gm44372 miRNA miRNA MGP_BALBcJ_T0035389.1 MGP_BALBcJ_G0019893.1 mouse_genomes_project 12 83082607 83118941 - MGP_BALBcJ_P0035389 Mlh3 protein_coding protein_coding MGP_BALBcJ_T0035390.1 MGP_BALBcJ_G0019893.1 mouse_genomes_project 12 83082607 83118914 - MGP_BALBcJ_P0035390 Mlh3 protein_coding protein_coding MGP_BALBcJ_T0017295.1 MGP_BALBcJ_G0015179.1 mouse_genomes_project 12 115042520 115076493 - Gm20658 processed_transcript processed_transcript MGP_BALBcJ_T0017296.1 MGP_BALBcJ_G0015179.1 mouse_genomes_project 12 115042543 115076608 - Gm20658 processed_transcript processed_transcript MGP_BALBcJ_T0000863.1 MGP_BALBcJ_G0000795.1 mouse_genomes_project 12 108065240 108073972 + TEC TEC MGP_BALBcJ_T0006450.1 MGP_BALBcJ_G0005374.1 mouse_genomes_project 12 107938893 107939735 + Gm27000 lincRNA lincRNA MGP_BALBcJ_T0000862.1 MGP_BALBcJ_G0000794.1 mouse_genomes_project 12 102076943 102079496 - TEC TEC MGP_BALBcJ_T0000262.1 MGP_BALBcJ_G0000203.1 mouse_genomes_project 12 114408992 114409422 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0009865.1 MGP_BALBcJ_G0007990.1 mouse_genomes_project 12 108139815 108139894 + Mir409 miRNA miRNA MGP_BALBcJ_T0009870.1 MGP_BALBcJ_G0007995.1 mouse_genomes_project 12 108144970 108145053 + Mir3072 miRNA miRNA MGP_BALBcJ_T0034398.1 MGP_BALBcJ_G0019549.1 mouse_genomes_project 12 10382770 10700463 + MGP_BALBcJ_P0034398 Nbas protein_coding protein_coding MGP_BALBcJ_T0035613.1 MGP_BALBcJ_G0019957.1 mouse_genomes_project 12 98114166 98148342 - MGP_BALBcJ_P0035613 Nrde2 protein_coding protein_coding MGP_BALBcJ_T0009877.1 MGP_BALBcJ_G0008002.1 mouse_genomes_project 12 111207989 111208059 + Mir6940 miRNA miRNA MGP_BALBcJ_T0034568.1 MGP_BALBcJ_G0019610.1 mouse_genomes_project 12 29054496 29061559 - MGP_BALBcJ_P0034568 Gpr22 protein_coding protein_coding MGP_BALBcJ_T0034569.1 MGP_BALBcJ_G0019610.1 mouse_genomes_project 12 29056341 29061580 - MGP_BALBcJ_P0034569 Gpr22 protein_coding protein_coding MGP_BALBcJ_T0034570.1 MGP_BALBcJ_G0019610.1 mouse_genomes_project 12 29057078 29061566 - MGP_BALBcJ_P0034570 Gpr22 protein_coding protein_coding MGP_BALBcJ_T0099307.1 MGP_BALBcJ_G0037343.1 mouse_genomes_project 12 1935160 1935263 - Gm23167 snRNA snRNA MGP_BALBcJ_T0035680.1 MGP_BALBcJ_G0019979.1 mouse_genomes_project 12 100733375 100734807 - MGP_BALBcJ_P0035680 Moap1 protein_coding protein_coding MGP_BALBcJ_T0035681.1 MGP_BALBcJ_G0019979.1 mouse_genomes_project 12 100733375 100734791 - MGP_BALBcJ_P0035681 Moap1 protein_coding protein_coding MGP_BALBcJ_T0035213.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80364522 80828865 + MGP_BALBcJ_P0035213 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035214.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80393869 80944982 + MGP_BALBcJ_P0035214 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035215.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394158 80877158 + MGP_BALBcJ_P0035215 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035216.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394178 80945251 + MGP_BALBcJ_P0035216 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035217.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394271 80945823 + MGP_BALBcJ_P0035217 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035218.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394732 80946379 + MGP_BALBcJ_P0035218 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035219.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394732 80949067 + MGP_BALBcJ_P0035219 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035220.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394805 80945357 + MGP_BALBcJ_P0035220 Rgs6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0035221.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394820 80847689 + MGP_BALBcJ_P0035221 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035222.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394868 80832684 + MGP_BALBcJ_P0035222 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035223.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80394887 80945104 + MGP_BALBcJ_P0035223 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035224.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80395082 80832622 + MGP_BALBcJ_P0035224 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035225.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80395258 80396226 + Rgs6 protein_coding retained_intron MGP_BALBcJ_T0035226.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80425972 80944982 + MGP_BALBcJ_P0035226 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035227.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80425972 80944982 + MGP_BALBcJ_P0035227 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035228.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80425972 80920285 + MGP_BALBcJ_P0035228 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035229.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80425972 80924267 + MGP_BALBcJ_P0035229 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035230.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80425972 80924267 + MGP_BALBcJ_P0035230 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035231.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80425972 80924390 + MGP_BALBcJ_P0035231 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035232.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80828262 80829393 + Rgs6 protein_coding retained_intron MGP_BALBcJ_T0035233.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80892554 80945218 + MGP_BALBcJ_P0035233 Rgs6 protein_coding protein_coding MGP_BALBcJ_T0035234.1 MGP_BALBcJ_G0019848.1 mouse_genomes_project 12 80902570 80924164 + Rgs6 protein_coding retained_intron MGP_BALBcJ_T0035158.1 MGP_BALBcJ_G0019831.1 mouse_genomes_project 12 78485355 78576521 + MGP_BALBcJ_P0035158 Susd6 protein_coding protein_coding MGP_BALBcJ_T0100600.1 MGP_BALBcJ_G0038636.1 mouse_genomes_project 12 104531027 104531159 + Gm24986 snoRNA snoRNA MGP_BALBcJ_T0100559.1 MGP_BALBcJ_G0038595.1 mouse_genomes_project 12 18505973 18506106 + Gm25821 snoRNA snoRNA MGP_BALBcJ_T0035407.1 MGP_BALBcJ_G0019902.1 mouse_genomes_project 12 83665107 83674182 - MGP_BALBcJ_P0035407 0610007P14Rik protein_coding protein_coding MGP_BALBcJ_T0035408.1 MGP_BALBcJ_G0019902.1 mouse_genomes_project 12 83665318 83674172 - 0610007P14Rik protein_coding processed_transcript MGP_BALBcJ_T0035409.1 MGP_BALBcJ_G0019902.1 mouse_genomes_project 12 83668756 83674204 - 0610007P14Rik protein_coding retained_intron MGP_BALBcJ_T0035410.1 MGP_BALBcJ_G0019902.1 mouse_genomes_project 12 83668991 83671910 - 0610007P14Rik protein_coding retained_intron MGP_BALBcJ_T0035411.1 MGP_BALBcJ_G0019902.1 mouse_genomes_project 12 83669198 83674210 - MGP_BALBcJ_P0035411 0610007P14Rik protein_coding protein_coding MGP_BALBcJ_T0000028.1 MGP_BALBcJ_G0000021.1 mouse_genomes_project 12 111993704 111993714 - MGP_BALBcJ_P0000028 Ighd5-5 IG_D_gene IG_D_gene MGP_BALBcJ_T0035780.1 MGP_BALBcJ_G0020022.1 mouse_genomes_project 12 103110513 103160370 - MGP_BALBcJ_P0035780 Syne3 protein_coding protein_coding MGP_BALBcJ_T0035766.1 MGP_BALBcJ_G0020012.1 mouse_genomes_project 12 102355887 102377843 + MGP_BALBcJ_P0035766 protein_coding protein_coding MGP_BALBcJ_T0035767.1 MGP_BALBcJ_G0020012.1 mouse_genomes_project 12 102355887 102377837 + MGP_BALBcJ_P0035767 protein_coding protein_coding MGP_BALBcJ_T0035125.1 MGP_BALBcJ_G0019815.1 mouse_genomes_project 12 76766235 76775185 - MGP_BALBcJ_P0035125 Pigh protein_coding protein_coding MGP_BALBcJ_T0009880.1 MGP_BALBcJ_G0008005.1 mouse_genomes_project 12 113281129 113281189 - Mir7094-2 miRNA miRNA MGP_BALBcJ_T0100602.1 MGP_BALBcJ_G0038638.1 mouse_genomes_project 12 108030029 108030104 + Gm23474 snoRNA snoRNA MGP_BALBcJ_T0098481.1 MGP_BALBcJ_G0036535.1 mouse_genomes_project 12 65084743 65084862 - n-R5s60 rRNA rRNA MGP_BALBcJ_T0000119.1 MGP_BALBcJ_G0000090.1 mouse_genomes_project 12 114915214 114915701 - MGP_BALBcJ_P0000119 IG_V_gene IG_V_gene MGP_BALBcJ_T0006369.1 MGP_BALBcJ_G0005312.1 mouse_genomes_project 12 12967849 13035478 + Gm5432 lincRNA lincRNA MGP_BALBcJ_T0012788.1 MGP_BALBcJ_G0010885.1 mouse_genomes_project 12 52848922 52849445 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0035108.1 MGP_BALBcJ_G0019806.1 mouse_genomes_project 12 75289753 75291636 - MGP_BALBcJ_P0035108 protein_coding protein_coding MGP_BALBcJ_T0035148.1 MGP_BALBcJ_G0019825.1 mouse_genomes_project 12 78152016 78188481 + MGP_BALBcJ_P0035148 Exd2 protein_coding protein_coding MGP_BALBcJ_T0035929.1 MGP_BALBcJ_G0020070.1 mouse_genomes_project 12 109699052 109704368 + MGP_BALBcJ_P0035929 Amn protein_coding protein_coding MGP_BALBcJ_T0009794.1 MGP_BALBcJ_G0007919.1 mouse_genomes_project 12 89717029 89717094 - Gm22015 miRNA miRNA MGP_BALBcJ_T0000265.1 MGP_BALBcJ_G0000206.1 mouse_genomes_project 12 114848078 114849481 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0036097.1 MGP_BALBcJ_G0020126.1 mouse_genomes_project 12 117150583 117222959 - MGP_BALBcJ_P0036097 Sp4 protein_coding protein_coding MGP_BALBcJ_T0035775.1 MGP_BALBcJ_G0020018.1 mouse_genomes_project 12 102649229 102652220 + MGP_BALBcJ_P0035775 Gm1000 protein_coding protein_coding MGP_BALBcJ_T0012776.1 MGP_BALBcJ_G0010873.1 mouse_genomes_project 12 10879516 10880492 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000853.1 MGP_BALBcJ_G0000785.1 mouse_genomes_project 12 58340817 58351506 + TEC TEC MGP_BALBcJ_T0100609.1 MGP_BALBcJ_G0038645.1 mouse_genomes_project 12 108049404 108049476 + Gm23508 snoRNA snoRNA MGP_BALBcJ_T0099324.1 MGP_BALBcJ_G0037360.1 mouse_genomes_project 12 52075562 52075726 - Gm24305 snRNA snRNA MGP_BALBcJ_T0034611.1 MGP_BALBcJ_G0019621.1 mouse_genomes_project 12 31265679 31266565 + MGP_BALBcJ_P0034611 Ferd3l protein_coding protein_coding MGP_BALBcJ_T0009759.1 MGP_BALBcJ_G0007884.1 mouse_genomes_project 12 14506307 14506390 + Mir3066 miRNA miRNA MGP_BALBcJ_T0036093.1 MGP_BALBcJ_G0020125.1 mouse_genomes_project 12 116785173 116973400 - MGP_BALBcJ_P0036093 Dnah11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036094.1 MGP_BALBcJ_G0020125.1 mouse_genomes_project 12 116785173 117117152 - MGP_BALBcJ_P0036094 Dnah11 protein_coding protein_coding MGP_BALBcJ_T0036095.1 MGP_BALBcJ_G0020125.1 mouse_genomes_project 12 116809313 116822565 - Dnah11 protein_coding retained_intron MGP_BALBcJ_T0036096.1 MGP_BALBcJ_G0020125.1 mouse_genomes_project 12 116809329 116822794 - Dnah11 protein_coding processed_transcript MGP_BALBcJ_T0009799.1 MGP_BALBcJ_G0007924.1 mouse_genomes_project 12 100980993 100981128 + Gm44324 miRNA miRNA MGP_BALBcJ_T0036026.1 MGP_BALBcJ_G0020103.1 mouse_genomes_project 12 111290218 111299371 - MGP_BALBcJ_P0036026 Cdca4 protein_coding protein_coding MGP_BALBcJ_T0009777.1 MGP_BALBcJ_G0007902.1 mouse_genomes_project 12 67130260 67130369 - Gm23018 miRNA miRNA MGP_BALBcJ_T0000263.1 MGP_BALBcJ_G0000204.1 mouse_genomes_project 12 114518336 114518630 - IG_V_pseudogene IG_V_pseudogene MGP_BALBcJ_T0003380.1 MGP_BALBcJ_G0003105.1 mouse_genomes_project 12 67376035 67380250 + 4930512B01Rik antisense antisense MGP_BALBcJ_T0003381.1 MGP_BALBcJ_G0003105.1 mouse_genomes_project 12 67376082 67428416 + 4930512B01Rik antisense antisense MGP_BALBcJ_T0035296.1 MGP_BALBcJ_G0019866.1 mouse_genomes_project 12 81954969 81957328 - MGP_BALBcJ_P0035296 Pnma1 protein_coding protein_coding MGP_BALBcJ_T0000083.1 MGP_BALBcJ_G0000064.1 mouse_genomes_project 12 112960664 112961101 - MGP_BALBcJ_P0000083 Ighv3-5 IG_V_gene IG_V_gene MGP_BALBcJ_T0000084.1 MGP_BALBcJ_G0000064.1 mouse_genomes_project 12 112960664 112960963 - MGP_BALBcJ_P0000084 Ighv3-5 IG_V_gene IG_V_gene MGP_BALBcJ_T0009833.1 MGP_BALBcJ_G0007958.1 mouse_genomes_project 12 108108997 108109117 + Mir1197 miRNA miRNA MGP_BALBcJ_T0006394.1 MGP_BALBcJ_G0005330.1 mouse_genomes_project 12 68989941 68990988 - 1700083H02Rik lincRNA lincRNA MGP_BALBcJ_T0034369.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6015927 6071448 + MGP_BALBcJ_P0034369 Wdr35 protein_coding protein_coding MGP_BALBcJ_T0034370.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6016046 6034003 + Wdr35 protein_coding retained_intron MGP_BALBcJ_T0034371.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6016046 6034008 + MGP_BALBcJ_P0034371 Wdr35 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034372.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6016082 6071447 + MGP_BALBcJ_P0034372 Wdr35 protein_coding protein_coding MGP_BALBcJ_T0034373.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6016094 6065103 + Wdr35 protein_coding retained_intron MGP_BALBcJ_T0034374.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6016904 6028012 + Wdr35 protein_coding retained_intron MGP_BALBcJ_T0034375.1 MGP_BALBcJ_G0019533.1 mouse_genomes_project 12 6064709 6067068 + Wdr35 protein_coding retained_intron MGP_BALBcJ_T0034938.1 MGP_BALBcJ_G0019748.1 mouse_genomes_project 12 68050818 68065678 + MGP_BALBcJ_P0034938 Tmx1 protein_coding protein_coding MGP_BALBcJ_T0034939.1 MGP_BALBcJ_G0019748.1 mouse_genomes_project 12 68053747 68063891 + MGP_BALBcJ_P0034939 Tmx1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0034940.1 MGP_BALBcJ_G0019748.1 mouse_genomes_project 12 68057545 68058281 + Tmx1 protein_coding retained_intron MGP_BALBcJ_T0034919.1 MGP_BALBcJ_G0019743.1 mouse_genomes_project 12 67553112 67578889 - MGP_BALBcJ_P0034919 Sav1 protein_coding protein_coding MGP_BALBcJ_T0034816.1 MGP_BALBcJ_G0019706.1 mouse_genomes_project 12 56502679 56520907 - MGP_BALBcJ_P0034816 Trappc6b protein_coding protein_coding MGP_BALBcJ_T0034316.1 MGP_BALBcJ_G0019515.1 mouse_genomes_project 12 1692996 1701967 + MGP_BALBcJ_P0034316 Pfn4 protein_coding protein_coding MGP_BALBcJ_T0034317.1 MGP_BALBcJ_G0019515.1 mouse_genomes_project 12 1693152 1701939 + MGP_BALBcJ_P0034317 Pfn4 protein_coding protein_coding MGP_BALBcJ_T0002530.1 MGP_BALBcJ_G0002433.1 mouse_genomes_project 14 47183839 47183896 + MGP_BALBcJ_P0002530 Traj25 TR_J_gene TR_J_gene MGP_BALBcJ_T0099402.1 MGP_BALBcJ_G0037438.1 mouse_genomes_project 14 29232797 29232903 + Gm25204 snRNA snRNA MGP_BALBcJ_T0099428.1 MGP_BALBcJ_G0037464.1 mouse_genomes_project 14 86557235 86557397 - Gm23509 snRNA snRNA MGP_BALBcJ_T0006703.1 MGP_BALBcJ_G0005533.1 mouse_genomes_project 14 63880473 63904823 + 2410012E07Rik lincRNA lincRNA MGP_BALBcJ_T0040340.1 MGP_BALBcJ_G0021622.1 mouse_genomes_project 14 113750365 113773276 - MGP_BALBcJ_P0040340 Oxgr1 protein_coding protein_coding MGP_BALBcJ_T0038599.1 MGP_BALBcJ_G0021041.1 mouse_genomes_project 14 19360578 19429719 + MGP_BALBcJ_P0038599 Il17rd protein_coding protein_coding MGP_BALBcJ_T0002641.1 MGP_BALBcJ_G0002528.1 mouse_genomes_project 14 46930922 46931510 + MGP_BALBcJ_P0002641 Trdv2-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0002642.1 MGP_BALBcJ_G0002528.1 mouse_genomes_project 14 46930922 46931510 + MGP_BALBcJ_P0002642 Trdv2-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0099411.1 MGP_BALBcJ_G0037447.1 mouse_genomes_project 14 43455794 43455901 + Gm24316 snRNA snRNA MGP_BALBcJ_T0003526.1 MGP_BALBcJ_G0003208.1 mouse_genomes_project 14 46914798 46942268 - antisense antisense MGP_BALBcJ_T0002541.1 MGP_BALBcJ_G0002444.1 mouse_genomes_project 14 47194756 47194813 + MGP_BALBcJ_P0002541 Traj13 TR_J_gene TR_J_gene MGP_BALBcJ_T0038769.1 MGP_BALBcJ_G0021082.1 mouse_genomes_project 14 23883198 23897978 + MGP_BALBcJ_P0038769 Eaf1 protein_coding protein_coding MGP_BALBcJ_T0039547.1 MGP_BALBcJ_G0021318.1 mouse_genomes_project 14 48597400 48603840 + MGP_BALBcJ_P0039547 Irf9 protein_coding protein_coding MGP_BALBcJ_T0039548.1 MGP_BALBcJ_G0021318.1 mouse_genomes_project 14 48597814 48603840 + MGP_BALBcJ_P0039548 Irf9 protein_coding protein_coding MGP_BALBcJ_T0039549.1 MGP_BALBcJ_G0021318.1 mouse_genomes_project 14 48598406 48599670 + Irf9 protein_coding retained_intron MGP_BALBcJ_T0039550.1 MGP_BALBcJ_G0021318.1 mouse_genomes_project 14 48598408 48603840 + MGP_BALBcJ_P0039550 Irf9 protein_coding protein_coding MGP_BALBcJ_T0039551.1 MGP_BALBcJ_G0021318.1 mouse_genomes_project 14 48599629 48603837 + Irf9 protein_coding retained_intron MGP_BALBcJ_T0039552.1 MGP_BALBcJ_G0021318.1 mouse_genomes_project 14 48601084 48602543 + Irf9 protein_coding retained_intron MGP_BALBcJ_T0100724.1 MGP_BALBcJ_G0038760.1 mouse_genomes_project 14 103564628 103564758 - Gm25901 snoRNA snoRNA MGP_BALBcJ_T0039120.1 MGP_BALBcJ_G0021187.1 mouse_genomes_project 14 42587615 42588621 - MGP_BALBcJ_P0039120 protein_coding protein_coding MGP_BALBcJ_T0006689.1 MGP_BALBcJ_G0005524.1 mouse_genomes_project 14 54772267 54790630 + Gm27017 lincRNA lincRNA MGP_BALBcJ_T0002620.1 MGP_BALBcJ_G0002513.1 mouse_genomes_project 14 46375327 46376955 + MGP_BALBcJ_P0002620 TR_V_gene TR_V_gene MGP_BALBcJ_T0002621.1 MGP_BALBcJ_G0002513.1 mouse_genomes_project 14 46376648 46376955 + MGP_BALBcJ_P0002621 TR_V_gene TR_V_gene MGP_BALBcJ_T0003553.1 MGP_BALBcJ_G0003229.1 mouse_genomes_project 14 62517242 62537989 + Gm27175 antisense antisense MGP_BALBcJ_T0002544.1 MGP_BALBcJ_G0002447.1 mouse_genomes_project 14 47198422 47198480 + MGP_BALBcJ_P0002544 Traj9 TR_J_gene TR_J_gene MGP_BALBcJ_T0039951.1 MGP_BALBcJ_G0021484.1 mouse_genomes_project 14 62523018 62526936 - MGP_BALBcJ_P0039951 protein_coding protein_coding MGP_BALBcJ_T0006699.1 MGP_BALBcJ_G0005530.1 mouse_genomes_project 14 62560632 62569719 - Gm27174 lincRNA lincRNA MGP_BALBcJ_T0099435.1 MGP_BALBcJ_G0037471.1 mouse_genomes_project 14 94317491 94317592 - Gm23538 snRNA snRNA MGP_BALBcJ_T0039652.1 MGP_BALBcJ_G0021367.1 mouse_genomes_project 14 50211377 50214755 - MGP_BALBcJ_P0039652 Gm4491 protein_coding protein_coding MGP_BALBcJ_T0040397.1 MGP_BALBcJ_G0021643.1 mouse_genomes_project 14 117086924 117415973 - MGP_BALBcJ_P0040397 Nalcn protein_coding protein_coding MGP_BALBcJ_T0002631.1 MGP_BALBcJ_G0002521.1 mouse_genomes_project 14 46755577 46756194 + MGP_BALBcJ_P0002631 Trav3-4 TR_V_gene TR_V_gene MGP_BALBcJ_T0040322.1 MGP_BALBcJ_G0021618.1 mouse_genomes_project 14 112586196 112633672 - MGP_BALBcJ_P0040322 Dzip1 protein_coding protein_coding MGP_BALBcJ_T0040323.1 MGP_BALBcJ_G0021618.1 mouse_genomes_project 14 112586784 112635820 - MGP_BALBcJ_P0040323 Dzip1 protein_coding protein_coding MGP_BALBcJ_T0012955.1 MGP_BALBcJ_G0011052.1 mouse_genomes_project 14 10886721 10887819 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040112.1 MGP_BALBcJ_G0021534.1 mouse_genomes_project 14 68342709 68402882 + MGP_BALBcJ_P0040112 Zc3h13 protein_coding unknown_likely_coding MGP_BALBcJ_T0040113.1 MGP_BALBcJ_G0021534.1 mouse_genomes_project 14 68342785 68402874 + MGP_BALBcJ_P0040113 Zc3h13 protein_coding protein_coding MGP_BALBcJ_T0002701.1 MGP_BALBcJ_G0002577.1 mouse_genomes_project 14 46279437 46280558 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0099426.1 MGP_BALBcJ_G0037462.1 mouse_genomes_project 14 79668638 79668778 + Gm25115 snRNA snRNA MGP_BALBcJ_T0039342.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47246622 47261435 + MGP_BALBcJ_P0039342 Abhd4 protein_coding protein_coding MGP_BALBcJ_T0039343.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47251703 47261529 + MGP_BALBcJ_P0039343 Abhd4 protein_coding protein_coding MGP_BALBcJ_T0039344.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47251718 47255606 + Abhd4 protein_coding retained_intron MGP_BALBcJ_T0039345.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47251724 47255765 + MGP_BALBcJ_P0039345 Abhd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039346.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47251752 47255768 + MGP_BALBcJ_P0039346 Abhd4 protein_coding protein_coding MGP_BALBcJ_T0039347.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47255420 47262772 + MGP_BALBcJ_P0039347 Abhd4 protein_coding protein_coding MGP_BALBcJ_T0039348.1 MGP_BALBcJ_G0021267.1 mouse_genomes_project 14 47255725 47260214 + MGP_BALBcJ_P0039348 Abhd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002704.1 MGP_BALBcJ_G0002580.1 mouse_genomes_project 14 46856548 46857100 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0013022.1 MGP_BALBcJ_G0011119.1 mouse_genomes_project 14 117773076 117773617 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009955.1 MGP_BALBcJ_G0008080.1 mouse_genomes_project 14 18990472 18990534 - Mir7672 miRNA miRNA MGP_BALBcJ_T0038281.1 MGP_BALBcJ_G0020952.1 mouse_genomes_project 14 5631483 5970879 + MGP_BALBcJ_P0038281 Synpr protein_coding protein_coding MGP_BALBcJ_T0038282.1 MGP_BALBcJ_G0020952.1 mouse_genomes_project 14 5799691 5916973 + MGP_BALBcJ_P0038282 Synpr protein_coding protein_coding MGP_BALBcJ_T0038283.1 MGP_BALBcJ_G0020952.1 mouse_genomes_project 14 5799717 5920640 + Synpr protein_coding retained_intron MGP_BALBcJ_T0038284.1 MGP_BALBcJ_G0020952.1 mouse_genomes_project 14 5799790 5970879 + MGP_BALBcJ_P0038284 Synpr protein_coding protein_coding MGP_BALBcJ_T0038285.1 MGP_BALBcJ_G0020952.1 mouse_genomes_project 14 5799804 5965922 + Synpr protein_coding retained_intron MGP_BALBcJ_T0017332.1 MGP_BALBcJ_G0015202.1 mouse_genomes_project 14 43453 68866 + Gm16741 processed_transcript processed_transcript MGP_BALBcJ_T0039736.1 MGP_BALBcJ_G0021393.1 mouse_genomes_project 14 53217471 53226260 + MGP_BALBcJ_P0039736 4930563I02Rik protein_coding protein_coding MGP_BALBcJ_T0039737.1 MGP_BALBcJ_G0021393.1 mouse_genomes_project 14 53217917 53226270 + MGP_BALBcJ_P0039737 4930563I02Rik protein_coding protein_coding MGP_BALBcJ_T0040163.1 MGP_BALBcJ_G0021555.1 mouse_genomes_project 14 71592835 71638294 - MGP_BALBcJ_P0040163 Akap11 protein_coding protein_coding MGP_BALBcJ_T0040164.1 MGP_BALBcJ_G0021555.1 mouse_genomes_project 14 71592835 71638346 - MGP_BALBcJ_P0040164 Akap11 protein_coding protein_coding MGP_BALBcJ_T0038576.1 MGP_BALBcJ_G0021034.1 mouse_genomes_project 14 18897910 18947760 + MGP_BALBcJ_P0038576 Dennd6a protein_coding protein_coding MGP_BALBcJ_T0038577.1 MGP_BALBcJ_G0021034.1 mouse_genomes_project 14 18897927 18953975 + MGP_BALBcJ_P0038577 Dennd6a protein_coding protein_coding MGP_BALBcJ_T0038442.1 MGP_BALBcJ_G0021005.1 mouse_genomes_project 14 14241044 14280089 - MGP_BALBcJ_P0038442 Dupd1 protein_coding protein_coding MGP_BALBcJ_T0039385.1 MGP_BALBcJ_G0021277.1 mouse_genomes_project 14 47551119 47562051 - MGP_BALBcJ_P0039385 Ajuba protein_coding protein_coding MGP_BALBcJ_T0002635.1 MGP_BALBcJ_G0002524.1 mouse_genomes_project 14 46820890 46821616 + MGP_BALBcJ_P0002635 Trav18 TR_V_gene TR_V_gene MGP_BALBcJ_T0002636.1 MGP_BALBcJ_G0002524.1 mouse_genomes_project 14 46820890 46821616 + MGP_BALBcJ_P0002636 Trav18 TR_V_gene TR_V_gene MGP_BALBcJ_T0038605.1 MGP_BALBcJ_G0021046.1 mouse_genomes_project 14 19945398 20793787 + MGP_BALBcJ_P0038605 Erc2 protein_coding protein_coding MGP_BALBcJ_T0038606.1 MGP_BALBcJ_G0021046.1 mouse_genomes_project 14 19973496 20629832 + MGP_BALBcJ_P0038606 Erc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0038607.1 MGP_BALBcJ_G0021046.1 mouse_genomes_project 14 20099633 20629832 + MGP_BALBcJ_P0038607 Erc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0000900.1 MGP_BALBcJ_G0000831.1 mouse_genomes_project 14 38577916 38600988 - TEC TEC MGP_BALBcJ_T0002501.1 MGP_BALBcJ_G0002406.1 mouse_genomes_project 14 47144365 47144428 + MGP_BALBcJ_P0002501 Traj56 TR_J_gene TR_J_gene MGP_BALBcJ_T0039788.1 MGP_BALBcJ_G0021416.1 mouse_genomes_project 14 56122062 56129504 - MGP_BALBcJ_P0039788 Defb48 protein_coding protein_coding MGP_BALBcJ_T0040256.1 MGP_BALBcJ_G0021590.1 mouse_genomes_project 14 96527445 96533504 - MGP_BALBcJ_P0040256 Kctd12 protein_coding protein_coding MGP_BALBcJ_T0040257.1 MGP_BALBcJ_G0021590.1 mouse_genomes_project 14 96528401 96532418 - Kctd12 protein_coding processed_transcript MGP_BALBcJ_T0013002.1 MGP_BALBcJ_G0011099.1 mouse_genomes_project 14 67774694 67788438 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040365.1 MGP_BALBcJ_G0021637.1 mouse_genomes_project 14 116244651 116253532 - MGP_BALBcJ_P0040365 Zic5 protein_coding protein_coding MGP_BALBcJ_T0040366.1 MGP_BALBcJ_G0021637.1 mouse_genomes_project 14 116247045 116247874 - Zic5 protein_coding processed_transcript MGP_BALBcJ_T0002547.1 MGP_BALBcJ_G0002450.1 mouse_genomes_project 14 47202808 47202870 + MGP_BALBcJ_P0002547 Traj5 TR_J_gene TR_J_gene MGP_BALBcJ_T0040312.1 MGP_BALBcJ_G0021611.1 mouse_genomes_project 14 111712093 111751540 - MGP_BALBcJ_P0040312 Dct protein_coding protein_coding MGP_BALBcJ_T0040357.1 MGP_BALBcJ_G0021631.1 mouse_genomes_project 14 115679377 115683728 - MGP_BALBcJ_P0040357 Gpr18 protein_coding protein_coding MGP_BALBcJ_T0039992.1 MGP_BALBcJ_G0021499.1 mouse_genomes_project 14 63246529 63318181 - MGP_BALBcJ_P0039992 Ppp3cc protein_coding protein_coding MGP_BALBcJ_T0039818.1 MGP_BALBcJ_G0021429.1 mouse_genomes_project 14 56775624 56989771 + MGP_BALBcJ_P0039818 Xkr6 protein_coding protein_coding MGP_BALBcJ_T0039819.1 MGP_BALBcJ_G0021429.1 mouse_genomes_project 14 56775796 56832047 + MGP_BALBcJ_P0039819 Xkr6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039820.1 MGP_BALBcJ_G0021429.1 mouse_genomes_project 14 56776147 56828674 + MGP_BALBcJ_P0039820 Xkr6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039821.1 MGP_BALBcJ_G0021429.1 mouse_genomes_project 14 56825021 56828962 + Xkr6 protein_coding processed_transcript MGP_BALBcJ_T0039822.1 MGP_BALBcJ_G0021429.1 mouse_genomes_project 14 56962848 56988981 + MGP_BALBcJ_P0039822 Xkr6 protein_coding protein_coding MGP_BALBcJ_T0039692.1 MGP_BALBcJ_G0021379.1 mouse_genomes_project 14 51036824 51120273 - MGP_BALBcJ_P0039692 Micu2 protein_coding protein_coding MGP_BALBcJ_T0011351.1 MGP_BALBcJ_G0009476.1 mouse_genomes_project 14 47109107 47109447 + Gm23704 misc_RNA misc_RNA MGP_BALBcJ_T0040266.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96660807 96705254 - MGP_BALBcJ_P0040266 Mycbp2 protein_coding protein_coding MGP_BALBcJ_T0040267.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96660807 96890634 - MGP_BALBcJ_P0040267 Mycbp2 protein_coding protein_coding MGP_BALBcJ_T0040268.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96660807 96890252 - MGP_BALBcJ_P0040268 Mycbp2 protein_coding protein_coding MGP_BALBcJ_T0040269.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96661516 96890351 - MGP_BALBcJ_P0040269 Mycbp2 protein_coding unknown_likely_coding MGP_BALBcJ_T0040270.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96661529 96662793 - Mycbp2 protein_coding processed_transcript MGP_BALBcJ_T0040271.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96686978 96702305 - Mycbp2 protein_coding retained_intron MGP_BALBcJ_T0040272.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96705303 96741663 - MGP_BALBcJ_P0040272 Mycbp2 protein_coding protein_coding MGP_BALBcJ_T0040273.1 MGP_BALBcJ_G0021594.1 mouse_genomes_project 14 96858307 96890648 - Mycbp2 protein_coding retained_intron MGP_BALBcJ_T0039141.1 MGP_BALBcJ_G0021205.1 mouse_genomes_project 14 43161284 43162220 + MGP_BALBcJ_P0039141 Olfr740 protein_coding protein_coding MGP_BALBcJ_T0002615.1 MGP_BALBcJ_G0002509.1 mouse_genomes_project 14 46279391 46280558 + MGP_BALBcJ_P0002615 TR_V_gene TR_V_gene MGP_BALBcJ_T0002644.1 MGP_BALBcJ_G0002530.1 mouse_genomes_project 14 46957710 46958235 + MGP_BALBcJ_P0002644 Trav23 TR_V_gene TR_V_gene MGP_BALBcJ_T0038374.1 MGP_BALBcJ_G0020985.1 mouse_genomes_project 14 12943485 12947758 - MGP_BALBcJ_P0038374 Dnajc9 protein_coding protein_coding MGP_BALBcJ_T0040290.1 MGP_BALBcJ_G0021601.1 mouse_genomes_project 14 98815739 98866253 + MGP_BALBcJ_P0040290 Ndfip2 protein_coding protein_coding MGP_BALBcJ_T0040291.1 MGP_BALBcJ_G0021601.1 mouse_genomes_project 14 98815884 98866259 + MGP_BALBcJ_P0040291 Ndfip2 protein_coding protein_coding MGP_BALBcJ_T0040292.1 MGP_BALBcJ_G0021601.1 mouse_genomes_project 14 98815984 98851663 + Ndfip2 protein_coding retained_intron MGP_BALBcJ_T0040293.1 MGP_BALBcJ_G0021601.1 mouse_genomes_project 14 98849002 98865822 + Ndfip2 protein_coding retained_intron MGP_BALBcJ_T0040294.1 MGP_BALBcJ_G0021601.1 mouse_genomes_project 14 98849398 98865756 + Ndfip2 protein_coding retained_intron MGP_BALBcJ_T0040295.1 MGP_BALBcJ_G0021601.1 mouse_genomes_project 14 98851263 98865822 + Ndfip2 protein_coding processed_transcript MGP_BALBcJ_T0039719.1 MGP_BALBcJ_G0021387.1 mouse_genomes_project 14 52515534 52532479 - MGP_BALBcJ_P0039719 Phf11a protein_coding protein_coding MGP_BALBcJ_T0039690.1 MGP_BALBcJ_G0021378.1 mouse_genomes_project 14 50946828 51005108 - MGP_BALBcJ_P0039690 Zdhhc20 protein_coding protein_coding MGP_BALBcJ_T0039691.1 MGP_BALBcJ_G0021378.1 mouse_genomes_project 14 50950235 51005026 - MGP_BALBcJ_P0039691 Zdhhc20 protein_coding unknown_likely_coding MGP_BALBcJ_T0039754.1 MGP_BALBcJ_G0021400.1 mouse_genomes_project 14 54068446 54143473 - MGP_BALBcJ_P0039754 Tnfrsf19 protein_coding protein_coding MGP_BALBcJ_T0039755.1 MGP_BALBcJ_G0021400.1 mouse_genomes_project 14 54068446 54152107 - MGP_BALBcJ_P0039755 Tnfrsf19 protein_coding protein_coding MGP_BALBcJ_T0099433.1 MGP_BALBcJ_G0037469.1 mouse_genomes_project 14 92935830 92935986 - Gm25130 snRNA snRNA MGP_BALBcJ_T0012988.1 MGP_BALBcJ_G0011085.1 mouse_genomes_project 14 49864025 49864196 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011346.1 MGP_BALBcJ_G0009471.1 mouse_genomes_project 14 24234652 24234950 - Gm22876 misc_RNA misc_RNA MGP_BALBcJ_T0010001.1 MGP_BALBcJ_G0008126.1 mouse_genomes_project 14 108764128 108764215 + Mir19b-1 miRNA miRNA MGP_BALBcJ_T0038529.1 MGP_BALBcJ_G0021023.1 mouse_genomes_project 14 18463634 18478531 - MGP_BALBcJ_P0038529 protein_coding protein_coding MGP_BALBcJ_T0038530.1 MGP_BALBcJ_G0021023.1 mouse_genomes_project 14 18464017 18466513 - MGP_BALBcJ_P0038530 protein_coding protein_coding MGP_BALBcJ_T0038531.1 MGP_BALBcJ_G0021023.1 mouse_genomes_project 14 18464017 18477905 - MGP_BALBcJ_P0038531 protein_coding protein_coding MGP_BALBcJ_T0038533.1 MGP_BALBcJ_G0021023.1 mouse_genomes_project 14 18464061 18477907 - MGP_BALBcJ_P0038533 protein_coding protein_coding MGP_BALBcJ_T0040111.1 MGP_BALBcJ_G0021533.1 mouse_genomes_project 14 68296199 68341964 + MGP_BALBcJ_P0040111 Cpb2 protein_coding protein_coding MGP_BALBcJ_T0012982.1 MGP_BALBcJ_G0011079.1 mouse_genomes_project 14 45582903 45583128 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038991.1 MGP_BALBcJ_G0021160.1 mouse_genomes_project 14 37981133 38054192 - MGP_BALBcJ_P0038991 Fermt2 protein_coding protein_coding MGP_BALBcJ_T0038992.1 MGP_BALBcJ_G0021160.1 mouse_genomes_project 14 37991671 38000218 - MGP_BALBcJ_P0038992 Fermt2 protein_coding protein_coding MGP_BALBcJ_T0038993.1 MGP_BALBcJ_G0021160.1 mouse_genomes_project 14 37998255 38054038 - MGP_BALBcJ_P0038993 Fermt2 protein_coding protein_coding MGP_BALBcJ_T0038994.1 MGP_BALBcJ_G0021160.1 mouse_genomes_project 14 38028587 38053860 - Fermt2 protein_coding processed_transcript MGP_BALBcJ_T0039199.1 MGP_BALBcJ_G0021240.1 mouse_genomes_project 14 44666420 44680513 - MGP_BALBcJ_P0039199 Ang4 protein_coding protein_coding MGP_BALBcJ_T0038883.1 MGP_BALBcJ_G0021110.1 mouse_genomes_project 14 26037934 26093538 + MGP_BALBcJ_P0038883 Ptpn20 protein_coding protein_coding MGP_BALBcJ_T0039656.1 MGP_BALBcJ_G0021369.1 mouse_genomes_project 14 50379923 50506679 - MGP_BALBcJ_P0039656 Cryl1 protein_coding protein_coding MGP_BALBcJ_T0013008.1 MGP_BALBcJ_G0011105.1 mouse_genomes_project 14 92268355 92269295 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040282.1 MGP_BALBcJ_G0021598.1 mouse_genomes_project 14 98016944 98023399 - MGP_BALBcJ_P0040282 Pou4f1 protein_coding protein_coding MGP_BALBcJ_T0040283.1 MGP_BALBcJ_G0021598.1 mouse_genomes_project 14 98019232 98021010 - Pou4f1 protein_coding processed_transcript MGP_BALBcJ_T0039557.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634211 48644496 - MGP_BALBcJ_P0039557 Ipo4 protein_coding protein_coding MGP_BALBcJ_T0039558.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634445 48644443 - MGP_BALBcJ_P0039558 Ipo4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039559.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634527 48635244 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0039560.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634530 48636375 - Ipo4 protein_coding processed_transcript MGP_BALBcJ_T0039561.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634533 48635229 - Ipo4 protein_coding processed_transcript MGP_BALBcJ_T0039562.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634535 48636202 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0039563.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634551 48644769 - MGP_BALBcJ_P0039563 Ipo4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039564.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48634707 48646707 - Ipo4 protein_coding processed_transcript MGP_BALBcJ_T0039565.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48636109 48636736 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0039566.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48637594 48639472 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0039567.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48641739 48642470 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0039568.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48642568 48644022 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0039569.1 MGP_BALBcJ_G0021320.1 mouse_genomes_project 14 48642859 48644381 - Ipo4 protein_coding retained_intron MGP_BALBcJ_T0038472.1 MGP_BALBcJ_G0021010.1 mouse_genomes_project 14 14549106 14554710 - MGP_BALBcJ_P0038472 Zfp503 protein_coding protein_coding MGP_BALBcJ_T0002542.1 MGP_BALBcJ_G0002445.1 mouse_genomes_project 14 47195570 47195628 + MGP_BALBcJ_P0002542 Traj12 TR_J_gene TR_J_gene MGP_BALBcJ_T0000917.1 MGP_BALBcJ_G0000848.1 mouse_genomes_project 14 64406906 64407446 - TEC TEC MGP_BALBcJ_T0003524.1 MGP_BALBcJ_G0003206.1 mouse_genomes_project 14 45965869 45975169 - Gm30214 antisense antisense MGP_BALBcJ_T0100672.1 MGP_BALBcJ_G0038708.1 mouse_genomes_project 14 11173662 11173797 + Gm22499 snoRNA snoRNA MGP_BALBcJ_T0003507.1 MGP_BALBcJ_G0003190.1 mouse_genomes_project 14 16146317 16150856 + Gm29626 antisense antisense MGP_BALBcJ_T0003508.1 MGP_BALBcJ_G0003190.1 mouse_genomes_project 14 16146334 16150854 + Gm29626 antisense antisense MGP_BALBcJ_T0100681.1 MGP_BALBcJ_G0038717.1 mouse_genomes_project 14 26565867 26565956 + Gm24998 snoRNA snoRNA MGP_BALBcJ_T0039768.1 MGP_BALBcJ_G0021406.1 mouse_genomes_project 14 54656699 54681745 - MGP_BALBcJ_P0039768 Spryd7 protein_coding protein_coding MGP_BALBcJ_T0039769.1 MGP_BALBcJ_G0021406.1 mouse_genomes_project 14 54659011 54681617 - MGP_BALBcJ_P0039769 Spryd7 protein_coding protein_coding MGP_BALBcJ_T0003531.1 MGP_BALBcJ_G0003212.1 mouse_genomes_project 14 47964425 47965362 + Mhrt antisense antisense MGP_BALBcJ_T0003532.1 MGP_BALBcJ_G0003212.1 mouse_genomes_project 14 47964534 47970137 + Mhrt antisense antisense MGP_BALBcJ_T0039444.1 MGP_BALBcJ_G0021296.1 mouse_genomes_project 14 47931580 47934157 + MGP_BALBcJ_P0039444 Cmtm5 protein_coding protein_coding MGP_BALBcJ_T0012987.1 MGP_BALBcJ_G0011084.1 mouse_genomes_project 14 49325319 49326328 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003570.1 MGP_BALBcJ_G0003239.1 mouse_genomes_project 14 116742510 116746742 + Gm15735 antisense antisense MGP_BALBcJ_T0102234.1 MGP_BALBcJ_G0040050.1 mouse_genomes_project 14 12216737 12218958 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002495.1 MGP_BALBcJ_G0002402.1 mouse_genomes_project 14 47122007 47122066 + MGP_BALBcJ_P0002495 Trdj2 TR_J_gene TR_J_gene MGP_BALBcJ_T0012972.1 MGP_BALBcJ_G0011069.1 mouse_genomes_project 14 33057509 33058512 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002539.1 MGP_BALBcJ_G0002442.1 mouse_genomes_project 14 47192148 47192209 + MGP_BALBcJ_P0002539 Traj16 TR_J_gene TR_J_gene MGP_BALBcJ_T0040298.1 MGP_BALBcJ_G0021604.1 mouse_genomes_project 14 99651588 99654663 + MGP_BALBcJ_P0040298 Trim52 protein_coding protein_coding MGP_BALBcJ_T0040299.1 MGP_BALBcJ_G0021604.1 mouse_genomes_project 14 99651589 99680627 + Trim52 protein_coding processed_transcript MGP_BALBcJ_T0012986.1 MGP_BALBcJ_G0011083.1 mouse_genomes_project 14 49045702 49049348 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006679.1 MGP_BALBcJ_G0005515.1 mouse_genomes_project 14 44912917 44915394 - Gm16617 lincRNA lincRNA MGP_BALBcJ_T0100695.1 MGP_BALBcJ_G0038731.1 mouse_genomes_project 14 55800581 55800740 + Gm25162 snoRNA snoRNA MGP_BALBcJ_T0002700.1 MGP_BALBcJ_G0002576.1 mouse_genomes_project 14 46166851 46167120 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0099406.1 MGP_BALBcJ_G0037442.1 mouse_genomes_project 14 41280763 41280870 - Gm25380 snRNA snRNA MGP_BALBcJ_T0038851.1 MGP_BALBcJ_G0021102.1 mouse_genomes_project 14 25238054 25270305 + MGP_BALBcJ_P0038851 1810011H11Rik protein_coding protein_coding MGP_BALBcJ_T0039155.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43635229 43655557 - MGP_BALBcJ_P0039155 Osgep protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039156.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43642977 43655616 - MGP_BALBcJ_P0039156 Osgep protein_coding protein_coding MGP_BALBcJ_T0039157.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43645305 43655553 - MGP_BALBcJ_P0039157 Osgep protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039158.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43645309 43655595 - MGP_BALBcJ_P0039158 Osgep protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039159.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43645309 43655411 - MGP_BALBcJ_P0039159 Osgep protein_coding protein_coding MGP_BALBcJ_T0039160.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43645411 43646993 - Osgep protein_coding retained_intron MGP_BALBcJ_T0039161.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43646314 43655349 - MGP_BALBcJ_P0039161 Osgep protein_coding protein_coding MGP_BALBcJ_T0039162.1 MGP_BALBcJ_G0021219.1 mouse_genomes_project 14 43646714 43655566 - Osgep protein_coding retained_intron MGP_BALBcJ_T0038968.1 MGP_BALBcJ_G0021149.1 mouse_genomes_project 14 33634209 33636904 + MGP_BALBcJ_P0038968 Sftpa1 protein_coding protein_coding MGP_BALBcJ_T0038969.1 MGP_BALBcJ_G0021149.1 mouse_genomes_project 14 33634215 33638880 + MGP_BALBcJ_P0038969 Sftpa1 protein_coding protein_coding MGP_BALBcJ_T0002536.1 MGP_BALBcJ_G0002439.1 mouse_genomes_project 14 47189389 47189450 + MGP_BALBcJ_P0002536 Traj19 TR_J_gene TR_J_gene MGP_BALBcJ_T0039718.1 MGP_BALBcJ_G0021386.1 mouse_genomes_project 14 52515534 52530663 - MGP_BALBcJ_P0039718 Phf11c protein_coding protein_coding MGP_BALBcJ_T0038747.1 MGP_BALBcJ_G0021074.1 mouse_genomes_project 14 23584152 23587677 + MGP_BALBcJ_P0038747 Tnnc1 protein_coding protein_coding MGP_BALBcJ_T0038748.1 MGP_BALBcJ_G0021074.1 mouse_genomes_project 14 23584170 23587584 + MGP_BALBcJ_P0038748 Tnnc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038749.1 MGP_BALBcJ_G0021074.1 mouse_genomes_project 14 23584172 23586946 + Tnnc1 protein_coding retained_intron MGP_BALBcJ_T0100727.1 MGP_BALBcJ_G0038763.1 mouse_genomes_project 14 117721459 117721587 + Gm25272 snoRNA snoRNA MGP_BALBcJ_T0039012.1 MGP_BALBcJ_G0021164.1 mouse_genomes_project 14 39288847 39299449 + MGP_BALBcJ_P0039012 Cdkn3 protein_coding protein_coding MGP_BALBcJ_T0039013.1 MGP_BALBcJ_G0021164.1 mouse_genomes_project 14 39288946 39299411 + MGP_BALBcJ_P0039013 Cdkn3 protein_coding unknown_likely_coding MGP_BALBcJ_T0039054.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40221148 40310021 + MGP_BALBcJ_P0039054 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039055.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40222020 40310021 + MGP_BALBcJ_P0039055 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039056.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40222025 40237427 + MGP_BALBcJ_P0039056 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039057.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40222103 40310028 + MGP_BALBcJ_P0039057 Ktn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039058.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236867 40310027 + MGP_BALBcJ_P0039058 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039059.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039059 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039060.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309751 + MGP_BALBcJ_P0039060 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039061.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309743 + MGP_BALBcJ_P0039061 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039062.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309748 + MGP_BALBcJ_P0039062 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039063.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039063 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039064.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039064 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039065.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039065 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039066.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039066 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039067.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039067 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039068.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309753 + MGP_BALBcJ_P0039068 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039069.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309757 + MGP_BALBcJ_P0039069 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039070.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309752 + MGP_BALBcJ_P0039070 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039071.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039071 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039072.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309757 + MGP_BALBcJ_P0039072 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039073.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039073 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039074.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40236898 40309755 + MGP_BALBcJ_P0039074 Ktn1 protein_coding protein_coding MGP_BALBcJ_T0039075.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40273648 40277394 + Ktn1 protein_coding retained_intron MGP_BALBcJ_T0039076.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40278610 40288753 + Ktn1 protein_coding retained_intron MGP_BALBcJ_T0039077.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40287953 40298370 + Ktn1 protein_coding retained_intron MGP_BALBcJ_T0039078.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40298253 40299729 + Ktn1 protein_coding retained_intron MGP_BALBcJ_T0039079.1 MGP_BALBcJ_G0021175.1 mouse_genomes_project 14 40303144 40310025 + Ktn1 protein_coding retained_intron MGP_BALBcJ_T0038884.1 MGP_BALBcJ_G0021111.1 mouse_genomes_project 14 26384522 26396216 + MGP_BALBcJ_P0038884 Gdf10 protein_coding protein_coding MGP_BALBcJ_T0099394.1 MGP_BALBcJ_G0037430.1 mouse_genomes_project 14 6242395 6242492 + Gm25964 snRNA snRNA MGP_BALBcJ_T0017337.1 MGP_BALBcJ_G0015203.1 mouse_genomes_project 14 12049604 12050764 + processed_transcript processed_transcript MGP_BALBcJ_T0017338.1 MGP_BALBcJ_G0015203.1 mouse_genomes_project 14 12049711 12051663 + processed_transcript processed_transcript MGP_BALBcJ_T0002702.1 MGP_BALBcJ_G0002578.1 mouse_genomes_project 14 46536789 46537307 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0038408.1 MGP_BALBcJ_G0020996.1 mouse_genomes_project 14 13263182 13264573 + MGP_BALBcJ_P0038408 Chchd1 protein_coding protein_coding MGP_BALBcJ_T0040364.1 MGP_BALBcJ_G0021636.1 mouse_genomes_project 14 116222339 116238388 - MGP_BALBcJ_P0040364 Gm5089 protein_coding protein_coding MGP_BALBcJ_T0038332.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629536 10641457 + MGP_BALBcJ_P0038332 Nkiras1 protein_coding protein_coding MGP_BALBcJ_T0038333.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629586 10637734 + MGP_BALBcJ_P0038333 Nkiras1 protein_coding protein_coding MGP_BALBcJ_T0038334.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629604 10635029 + Nkiras1 protein_coding retained_intron MGP_BALBcJ_T0038335.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629611 10636112 + Nkiras1 protein_coding processed_transcript MGP_BALBcJ_T0038336.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629627 10638129 + MGP_BALBcJ_P0038336 Nkiras1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038337.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629638 10634784 + Nkiras1 protein_coding retained_intron MGP_BALBcJ_T0038338.1 MGP_BALBcJ_G0020972.1 mouse_genomes_project 14 10629664 10636253 + Nkiras1 protein_coding processed_transcript MGP_BALBcJ_T0098841.1 MGP_BALBcJ_G0036891.1 mouse_genomes_project 14 114988240 114993506 + B930095G15Rik sense_intronic sense_intronic MGP_BALBcJ_T0000910.1 MGP_BALBcJ_G0000841.1 mouse_genomes_project 14 54807433 54809580 + TEC TEC MGP_BALBcJ_T0038300.1 MGP_BALBcJ_G0020961.1 mouse_genomes_project 14 6778579 6779676 + MGP_BALBcJ_P0038300 Olfr721-ps1 protein_coding protein_coding MGP_BALBcJ_T0038301.1 MGP_BALBcJ_G0020961.1 mouse_genomes_project 14 6778701 6779676 + MGP_BALBcJ_P0038301 Olfr721-ps1 protein_coding protein_coding MGP_BALBcJ_T0099431.1 MGP_BALBcJ_G0037467.1 mouse_genomes_project 14 92175604 92175711 + Gm26139 snRNA snRNA MGP_BALBcJ_T0011345.1 MGP_BALBcJ_G0009470.1 mouse_genomes_project 14 23925308 23925610 - Gm24057 misc_RNA misc_RNA MGP_BALBcJ_T0038603.1 MGP_BALBcJ_G0021044.1 mouse_genomes_project 14 19757336 19811741 + MGP_BALBcJ_P0038603 Fam208a protein_coding protein_coding MGP_BALBcJ_T0012990.1 MGP_BALBcJ_G0011087.1 mouse_genomes_project 14 50544930 50545723 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039258.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45038285 45087680 + MGP_BALBcJ_P0039258 Rpgrip1 protein_coding protein_coding MGP_BALBcJ_T0039259.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45038485 45086817 + MGP_BALBcJ_P0039259 Rpgrip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039260.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45038504 45049016 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039261.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45038511 45085799 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039262.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45038521 45087712 + MGP_BALBcJ_P0039262 Rpgrip1 protein_coding protein_coding MGP_BALBcJ_T0039263.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45039772 45086589 + MGP_BALBcJ_P0039263 Rpgrip1 protein_coding protein_coding MGP_BALBcJ_T0039264.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45042167 45061716 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039265.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45047097 45047679 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039266.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45049238 45067446 + MGP_BALBcJ_P0039266 Rpgrip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039267.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45063389 45076135 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039268.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45063434 45087711 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039269.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45072214 45076037 + MGP_BALBcJ_P0039269 Rpgrip1 protein_coding protein_coding MGP_BALBcJ_T0039270.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45072274 45077251 + MGP_BALBcJ_P0039270 Rpgrip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039271.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45073847 45076227 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039272.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45076248 45086667 + MGP_BALBcJ_P0039272 Rpgrip1 protein_coding protein_coding MGP_BALBcJ_T0039273.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45076331 45077471 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039274.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45077197 45086511 + MGP_BALBcJ_P0039274 Rpgrip1 protein_coding protein_coding MGP_BALBcJ_T0039275.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45078789 45082786 + Rpgrip1 protein_coding retained_intron MGP_BALBcJ_T0039276.1 MGP_BALBcJ_G0021252.1 mouse_genomes_project 14 45084824 45089920 + MGP_BALBcJ_P0039276 Rpgrip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003517.1 MGP_BALBcJ_G0003199.1 mouse_genomes_project 14 30997013 31007104 + Gm20641 antisense antisense MGP_BALBcJ_T0002545.1 MGP_BALBcJ_G0002448.1 mouse_genomes_project 14 47200507 47200566 + MGP_BALBcJ_P0002545 Traj7 TR_J_gene TR_J_gene MGP_BALBcJ_T0039602.1 MGP_BALBcJ_G0021331.1 mouse_genomes_project 14 48773527 48777940 - MGP_BALBcJ_P0039602 Cideb protein_coding protein_coding MGP_BALBcJ_T0039603.1 MGP_BALBcJ_G0021331.1 mouse_genomes_project 14 48774140 48777861 - Cideb protein_coding retained_intron MGP_BALBcJ_T0038236.1 MGP_BALBcJ_G0020937.1 mouse_genomes_project 14 386920 398559 + MGP_BALBcJ_P0038236 protein_coding protein_coding MGP_BALBcJ_T0038237.1 MGP_BALBcJ_G0020937.1 mouse_genomes_project 14 396802 397279 + MGP_BALBcJ_P0038237 protein_coding protein_coding MGP_BALBcJ_T0017381.1 MGP_BALBcJ_G0015218.1 mouse_genomes_project 14 98671546 98676833 - Gm17066 processed_transcript processed_transcript MGP_BALBcJ_T0017382.1 MGP_BALBcJ_G0015218.1 mouse_genomes_project 14 98671565 98676618 - Gm17066 processed_transcript processed_transcript MGP_BALBcJ_T0039154.1 MGP_BALBcJ_G0021218.1 mouse_genomes_project 14 43624965 43626480 - MGP_BALBcJ_P0039154 A930018M24Rik protein_coding protein_coding MGP_BALBcJ_T0002526.1 MGP_BALBcJ_G0002429.1 mouse_genomes_project 14 47179529 47179589 + MGP_BALBcJ_P0002526 Traj29 TR_J_gene TR_J_gene MGP_BALBcJ_T0039917.1 MGP_BALBcJ_G0021468.1 mouse_genomes_project 14 60461369 60662142 + MGP_BALBcJ_P0039917 Ebf2 protein_coding protein_coding MGP_BALBcJ_T0039918.1 MGP_BALBcJ_G0021468.1 mouse_genomes_project 14 60461663 60663282 + MGP_BALBcJ_P0039918 Ebf2 protein_coding protein_coding MGP_BALBcJ_T0039919.1 MGP_BALBcJ_G0021468.1 mouse_genomes_project 14 60461680 60464592 + Ebf2 protein_coding retained_intron MGP_BALBcJ_T0039920.1 MGP_BALBcJ_G0021468.1 mouse_genomes_project 14 60462721 60661052 + MGP_BALBcJ_P0039920 Ebf2 protein_coding protein_coding MGP_BALBcJ_T0102235.1 MGP_BALBcJ_G0040051.1 mouse_genomes_project 14 18451319 18459204 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0038536.1 MGP_BALBcJ_G0021025.1 mouse_genomes_project 14 18497630 18501067 - MGP_BALBcJ_P0038536 Tmem254b protein_coding protein_coding MGP_BALBcJ_T0038537.1 MGP_BALBcJ_G0021025.1 mouse_genomes_project 14 18497634 18500673 - MGP_BALBcJ_P0038537 Tmem254b protein_coding protein_coding MGP_BALBcJ_T0011347.1 MGP_BALBcJ_G0009472.1 mouse_genomes_project 14 24442699 24442796 + Gm26045 misc_RNA misc_RNA MGP_BALBcJ_T0038898.1 MGP_BALBcJ_G0021122.1 mouse_genomes_project 14 26697492 26772256 - MGP_BALBcJ_P0038898 Fam35a protein_coding protein_coding MGP_BALBcJ_T0040079.1 MGP_BALBcJ_G0021524.1 mouse_genomes_project 14 66549686 66576037 - MGP_BALBcJ_P0040079 protein_coding protein_coding MGP_BALBcJ_T0000922.1 MGP_BALBcJ_G0000853.1 mouse_genomes_project 14 97506151 97507867 + TEC TEC MGP_BALBcJ_T0000907.1 MGP_BALBcJ_G0000838.1 mouse_genomes_project 14 48084299 48085338 - TEC TEC MGP_BALBcJ_T0102240.1 MGP_BALBcJ_G0040056.1 mouse_genomes_project 14 43840280 43840713 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0039604.1 MGP_BALBcJ_G0021332.1 mouse_genomes_project 14 48780881 48782683 + MGP_BALBcJ_P0039604 Ltb4r2 protein_coding protein_coding MGP_BALBcJ_T0009971.1 MGP_BALBcJ_G0008096.1 mouse_genomes_project 14 54754774 54754867 - Mir16-1 miRNA miRNA MGP_BALBcJ_T0002598.1 MGP_BALBcJ_G0002494.1 mouse_genomes_project 14 45692361 45692841 + MGP_BALBcJ_P0002598 Trav6d-4 TR_V_gene TR_V_gene MGP_BALBcJ_T0002599.1 MGP_BALBcJ_G0002494.1 mouse_genomes_project 14 45692392 45692841 + MGP_BALBcJ_P0002599 Trav6d-4 TR_V_gene TR_V_gene MGP_BALBcJ_T0038946.1 MGP_BALBcJ_G0021140.1 mouse_genomes_project 14 29570327 29582388 - 2610528A11Rik protein_coding processed_transcript MGP_BALBcJ_T0038947.1 MGP_BALBcJ_G0021140.1 mouse_genomes_project 14 29570329 29578467 - MGP_BALBcJ_P0038947 2610528A11Rik protein_coding protein_coding MGP_BALBcJ_T0039701.1 MGP_BALBcJ_G0021382.1 mouse_genomes_project 14 52266181 52280585 - MGP_BALBcJ_P0039701 Gm5142 protein_coding protein_coding MGP_BALBcJ_T0038843.1 MGP_BALBcJ_G0021097.1 mouse_genomes_project 14 24854687 24913599 - MGP_BALBcJ_P0038843 Chat protein_coding protein_coding MGP_BALBcJ_T0099404.1 MGP_BALBcJ_G0037440.1 mouse_genomes_project 14 32916176 32916283 + Gm24388 snRNA snRNA MGP_BALBcJ_T0040178.1 MGP_BALBcJ_G0021563.1 mouse_genomes_project 14 72576765 72597655 - MGP_BALBcJ_P0040178 Wbp4 protein_coding protein_coding MGP_BALBcJ_T0102236.1 MGP_BALBcJ_G0040052.1 mouse_genomes_project 14 18451328 18461007 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002628.1 MGP_BALBcJ_G0002518.1 mouse_genomes_project 14 46712112 46712644 + MGP_BALBcJ_P0002628 TR_V_gene TR_V_gene MGP_BALBcJ_T0040022.1 MGP_BALBcJ_G0021510.1 mouse_genomes_project 14 63615513 63632030 - MGP_BALBcJ_P0040022 Fam160b2 protein_coding protein_coding MGP_BALBcJ_T0040073.1 MGP_BALBcJ_G0021521.1 mouse_genomes_project 14 66252970 66258370 + MGP_BALBcJ_P0040073 Lpar6 protein_coding protein_coding MGP_BALBcJ_T0002623.1 MGP_BALBcJ_G0002514.1 mouse_genomes_project 14 46480279 46480810 + MGP_BALBcJ_P0002623 TR_V_gene TR_V_gene MGP_BALBcJ_T0002566.1 MGP_BALBcJ_G0002467.1 mouse_genomes_project 14 47140152 47140223 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0100722.1 MGP_BALBcJ_G0038758.1 mouse_genomes_project 14 100331612 100331739 + Gm23437 snoRNA snoRNA MGP_BALBcJ_T0039636.1 MGP_BALBcJ_G0021358.1 mouse_genomes_project 14 49743757 49773105 + MGP_BALBcJ_P0039636 Mphosph8 protein_coding protein_coding MGP_BALBcJ_T0039637.1 MGP_BALBcJ_G0021358.1 mouse_genomes_project 14 49747906 49749652 + Mphosph8 protein_coding processed_transcript MGP_BALBcJ_T0039638.1 MGP_BALBcJ_G0021358.1 mouse_genomes_project 14 49764055 49766924 + Mphosph8 protein_coding processed_transcript MGP_BALBcJ_T0039639.1 MGP_BALBcJ_G0021358.1 mouse_genomes_project 14 49768812 49773102 + Mphosph8 protein_coding processed_transcript MGP_BALBcJ_T0039640.1 MGP_BALBcJ_G0021358.1 mouse_genomes_project 14 49769098 49773103 + Mphosph8 protein_coding processed_transcript MGP_BALBcJ_T0100689.1 MGP_BALBcJ_G0038725.1 mouse_genomes_project 14 49319543 49319669 + Gm24118 snoRNA snoRNA MGP_BALBcJ_T0039129.1 MGP_BALBcJ_G0021196.1 mouse_genomes_project 14 42970691 42971735 - MGP_BALBcJ_P0039129 Olfr732 protein_coding protein_coding MGP_BALBcJ_T0012958.1 MGP_BALBcJ_G0011055.1 mouse_genomes_project 14 12944212 12944336 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040350.1 MGP_BALBcJ_G0021627.1 mouse_genomes_project 14 115025855 115122167 - MGP_BALBcJ_P0040350 Stk24 protein_coding protein_coding MGP_BALBcJ_T0039826.1 MGP_BALBcJ_G0021433.1 mouse_genomes_project 14 57162107 57203846 + MGP_BALBcJ_P0039826 Rp1l1 protein_coding protein_coding MGP_BALBcJ_T0038508.1 MGP_BALBcJ_G0021015.1 mouse_genomes_project 14 17059388 17097976 - MGP_BALBcJ_P0038508 Polr3a protein_coding protein_coding MGP_BALBcJ_T0039125.1 MGP_BALBcJ_G0021192.1 mouse_genomes_project 14 42806370 42807306 - MGP_BALBcJ_P0039125 Olfr728 protein_coding protein_coding MGP_BALBcJ_T0039975.1 MGP_BALBcJ_G0021494.1 mouse_genomes_project 14 63123332 63161641 + MGP_BALBcJ_P0039975 Bin3 protein_coding protein_coding MGP_BALBcJ_T0038793.1 MGP_BALBcJ_G0021087.1 mouse_genomes_project 14 24448344 24481772 + MGP_BALBcJ_P0038793 Galnt15 protein_coding protein_coding MGP_BALBcJ_T0038794.1 MGP_BALBcJ_G0021087.1 mouse_genomes_project 14 24448765 24479802 + MGP_BALBcJ_P0038794 Galnt15 protein_coding protein_coding MGP_BALBcJ_T0003550.1 MGP_BALBcJ_G0003226.1 mouse_genomes_project 14 60533095 60542903 - Gm6878 antisense antisense MGP_BALBcJ_T0006700.1 MGP_BALBcJ_G0005531.1 mouse_genomes_project 14 62748886 62767270 + 4930480K23Rik lincRNA lincRNA MGP_BALBcJ_T0006701.1 MGP_BALBcJ_G0005531.1 mouse_genomes_project 14 62748936 62782262 + 4930480K23Rik lincRNA lincRNA MGP_BALBcJ_T0039135.1 MGP_BALBcJ_G0021200.1 mouse_genomes_project 14 43050872 43056632 + MGP_BALBcJ_P0039135 Tlr11 protein_coding protein_coding MGP_BALBcJ_T0039136.1 MGP_BALBcJ_G0021200.1 mouse_genomes_project 14 43053470 43056463 + MGP_BALBcJ_P0039136 Tlr11 protein_coding protein_coding MGP_BALBcJ_T0100700.1 MGP_BALBcJ_G0038736.1 mouse_genomes_project 14 63453293 63453403 - Gm22725 snoRNA snoRNA MGP_BALBcJ_T0038309.1 MGP_BALBcJ_G0020964.1 mouse_genomes_project 14 7756679 7838405 - MGP_BALBcJ_P0038309 Lrrc3b protein_coding protein_coding MGP_BALBcJ_T0038310.1 MGP_BALBcJ_G0020964.1 mouse_genomes_project 14 7756682 7835917 - MGP_BALBcJ_P0038310 Lrrc3b protein_coding protein_coding MGP_BALBcJ_T0012985.1 MGP_BALBcJ_G0011082.1 mouse_genomes_project 14 47816466 47816896 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012979.1 MGP_BALBcJ_G0011076.1 mouse_genomes_project 14 43494560 43495372 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040324.1 MGP_BALBcJ_G0021619.1 mouse_genomes_project 14 112648888 112695521 + MGP_BALBcJ_P0040324 Dnajc3 protein_coding protein_coding MGP_BALBcJ_T0006695.1 MGP_BALBcJ_G0005529.1 mouse_genomes_project 14 57746021 57747259 + Mir124a-1hg lincRNA lincRNA MGP_BALBcJ_T0006696.1 MGP_BALBcJ_G0005529.1 mouse_genomes_project 14 57747197 57753113 + Mir124a-1hg lincRNA lincRNA MGP_BALBcJ_T0006697.1 MGP_BALBcJ_G0005529.1 mouse_genomes_project 14 57747673 57749610 + Mir124a-1hg lincRNA lincRNA MGP_BALBcJ_T0006698.1 MGP_BALBcJ_G0005529.1 mouse_genomes_project 14 57748828 57749825 + Mir124a-1hg lincRNA lincRNA MGP_BALBcJ_T0006714.1 MGP_BALBcJ_G0005542.1 mouse_genomes_project 14 112064794 112085966 + Gm26791 lincRNA lincRNA MGP_BALBcJ_T0012950.1 MGP_BALBcJ_G0011047.1 mouse_genomes_project 14 2190301 2190905 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040341.1 MGP_BALBcJ_G0021623.1 mouse_genomes_project 14 114001626 114162263 + MGP_BALBcJ_P0040341 Mbnl2 protein_coding protein_coding MGP_BALBcJ_T0040342.1 MGP_BALBcJ_G0021623.1 mouse_genomes_project 14 114001626 114162263 + MGP_BALBcJ_P0040342 Mbnl2 protein_coding protein_coding MGP_BALBcJ_T0038973.1 MGP_BALBcJ_G0021153.1 mouse_genomes_project 14 37493868 37512082 + MGP_BALBcJ_P0038973 Ptger2 protein_coding protein_coding MGP_BALBcJ_T0038907.1 MGP_BALBcJ_G0021126.1 mouse_genomes_project 14 26841303 26868064 + MGP_BALBcJ_P0038907 Mmrn2 protein_coding protein_coding MGP_BALBcJ_T0002514.1 MGP_BALBcJ_G0002417.1 mouse_genomes_project 14 47164489 47164553 + MGP_BALBcJ_P0002514 Traj42 TR_J_gene TR_J_gene MGP_BALBcJ_T0040191.1 MGP_BALBcJ_G0021568.1 mouse_genomes_project 14 72996598 73001816 - MGP_BALBcJ_P0040191 Gm10845 protein_coding protein_coding MGP_BALBcJ_T0039045.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39951188 39957678 - MGP_BALBcJ_P0039045 Dlgap5 protein_coding protein_coding MGP_BALBcJ_T0039046.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39951410 39981663 - MGP_BALBcJ_P0039046 Dlgap5 protein_coding protein_coding MGP_BALBcJ_T0039047.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39952126 39981684 - Dlgap5 protein_coding retained_intron MGP_BALBcJ_T0039048.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39953246 39981714 - Dlgap5 protein_coding retained_intron MGP_BALBcJ_T0039049.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39957273 39959390 - Dlgap5 protein_coding retained_intron MGP_BALBcJ_T0039050.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39962137 39975140 - MGP_BALBcJ_P0039050 Dlgap5 protein_coding protein_coding MGP_BALBcJ_T0039051.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39977103 39981707 - Dlgap5 protein_coding retained_intron MGP_BALBcJ_T0039052.1 MGP_BALBcJ_G0021173.1 mouse_genomes_project 14 39977635 39980020 - Dlgap5 protein_coding processed_transcript MGP_BALBcJ_T0009997.1 MGP_BALBcJ_G0008122.1 mouse_genomes_project 14 108763494 108763578 + Mir17 miRNA miRNA MGP_BALBcJ_T0038646.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23004913 23042429 + MGP_BALBcJ_P0038646 Rft1 protein_coding protein_coding MGP_BALBcJ_T0038647.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23004928 23012078 + Rft1 protein_coding processed_transcript MGP_BALBcJ_T0038648.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23004936 23014295 + Rft1 protein_coding processed_transcript MGP_BALBcJ_T0038649.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23004940 23015478 + Rft1 protein_coding retained_intron MGP_BALBcJ_T0038650.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23004960 23042429 + MGP_BALBcJ_P0038650 Rft1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038651.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23004960 23042429 + MGP_BALBcJ_P0038651 Rft1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038652.1 MGP_BALBcJ_G0021058.1 mouse_genomes_project 14 23033274 23040950 + Rft1 protein_coding processed_transcript MGP_BALBcJ_T0039143.1 MGP_BALBcJ_G0021207.1 mouse_genomes_project 14 43343582 43344687 + MGP_BALBcJ_P0039143 Olfr744 protein_coding protein_coding MGP_BALBcJ_T0038240.1 MGP_BALBcJ_G0020939.1 mouse_genomes_project 14 472600 479602 - MGP_BALBcJ_P0038240 Pdhb protein_coding protein_coding MGP_BALBcJ_T0039879.1 MGP_BALBcJ_G0021455.1 mouse_genomes_project 14 59194810 59253724 - MGP_BALBcJ_P0039879 Adam2 protein_coding protein_coding MGP_BALBcJ_T0012948.1 MGP_BALBcJ_G0011045.1 mouse_genomes_project 14 1102672 1103008 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040096.1 MGP_BALBcJ_G0021529.1 mouse_genomes_project 14 67793361 67993796 - MGP_BALBcJ_P0040096 Lrch1 protein_coding protein_coding MGP_BALBcJ_T0040097.1 MGP_BALBcJ_G0021529.1 mouse_genomes_project 14 67802355 67993579 - MGP_BALBcJ_P0040097 Lrch1 protein_coding unknown_likely_coding MGP_BALBcJ_T0002549.1 MGP_BALBcJ_G0002452.1 mouse_genomes_project 14 47206336 47206402 + MGP_BALBcJ_P0002549 Traj3 TR_J_gene TR_J_gene MGP_BALBcJ_T0039916.1 MGP_BALBcJ_G0021467.1 mouse_genomes_project 14 60239699 60298450 - MGP_BALBcJ_P0039916 Ppp2r2a protein_coding protein_coding MGP_BALBcJ_T0040046.1 MGP_BALBcJ_G0021518.1 mouse_genomes_project 14 66047532 66067509 - MGP_BALBcJ_P0040046 Cysltr2 protein_coding protein_coding MGP_BALBcJ_T0040047.1 MGP_BALBcJ_G0021518.1 mouse_genomes_project 14 66047532 66067509 - MGP_BALBcJ_P0040047 Cysltr2 protein_coding protein_coding MGP_BALBcJ_T0099403.1 MGP_BALBcJ_G0037439.1 mouse_genomes_project 14 32500668 32500832 + Gm25012 snRNA snRNA MGP_BALBcJ_T0040398.1 MGP_BALBcJ_G0021644.1 mouse_genomes_project 14 117452634 117762695 + MGP_BALBcJ_P0040398 Itgbl1 protein_coding protein_coding MGP_BALBcJ_T0040399.1 MGP_BALBcJ_G0021644.1 mouse_genomes_project 14 117452788 117762133 + MGP_BALBcJ_P0040399 Itgbl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040400.1 MGP_BALBcJ_G0021644.1 mouse_genomes_project 14 117454087 117762695 + MGP_BALBcJ_P0040400 Itgbl1 protein_coding protein_coding MGP_BALBcJ_T0002540.1 MGP_BALBcJ_G0002443.1 mouse_genomes_project 14 47193436 47193496 + MGP_BALBcJ_P0002540 Traj15 TR_J_gene TR_J_gene MGP_BALBcJ_T0039326.1 MGP_BALBcJ_G0021263.1 mouse_genomes_project 14 45386288 45398440 + MGP_BALBcJ_P0039326 Olfr1509 protein_coding protein_coding MGP_BALBcJ_T0039327.1 MGP_BALBcJ_G0021263.1 mouse_genomes_project 14 45386289 45397829 + MGP_BALBcJ_P0039327 Olfr1509 protein_coding protein_coding MGP_BALBcJ_T0039328.1 MGP_BALBcJ_G0021263.1 mouse_genomes_project 14 45386324 45397663 + MGP_BALBcJ_P0039328 Olfr1509 protein_coding protein_coding MGP_BALBcJ_T0039329.1 MGP_BALBcJ_G0021263.1 mouse_genomes_project 14 45396385 45397922 + MGP_BALBcJ_P0039329 Olfr1509 protein_coding protein_coding MGP_BALBcJ_T0039330.1 MGP_BALBcJ_G0021263.1 mouse_genomes_project 14 45397430 45398440 + MGP_BALBcJ_P0039330 Olfr1509 protein_coding protein_coding MGP_BALBcJ_T0040297.1 MGP_BALBcJ_G0021603.1 mouse_genomes_project 14 99645699 99646104 - MGP_BALBcJ_P0040297 Gm4775 protein_coding protein_coding MGP_BALBcJ_T0002646.1 MGP_BALBcJ_G0002532.1 mouse_genomes_project 14 47133816 47134449 - MGP_BALBcJ_P0002646 Trdv5 TR_V_gene TR_V_gene MGP_BALBcJ_T0012981.1 MGP_BALBcJ_G0011078.1 mouse_genomes_project 14 45455194 45455762 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040080.1 MGP_BALBcJ_G0021525.1 mouse_genomes_project 14 66550808 66553015 - MGP_BALBcJ_P0040080 protein_coding protein_coding MGP_BALBcJ_T0006705.1 MGP_BALBcJ_G0005535.1 mouse_genomes_project 14 69596592 69602813 - 4930444M15Rik lincRNA lincRNA MGP_BALBcJ_T0009996.1 MGP_BALBcJ_G0008121.1 mouse_genomes_project 14 104972610 104972705 + Gm22802 miRNA miRNA MGP_BALBcJ_T0017346.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54726111 54806297 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017347.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54726306 54806238 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017348.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54726744 54806226 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017349.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54726861 54772140 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017350.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54726996 54772105 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017351.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54740901 54742458 - Dleu2 processed_transcript TEC MGP_BALBcJ_T0017352.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54742179 54806249 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017353.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54747889 54772080 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017354.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54750501 54754787 - Dleu2 processed_transcript TEC MGP_BALBcJ_T0017355.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54751312 54806249 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017356.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54755193 54771940 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017357.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54755243 54772140 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017358.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54758121 54806238 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017359.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54766659 54806237 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0017360.1 MGP_BALBcJ_G0015208.1 mouse_genomes_project 14 54766733 54806249 - Dleu2 processed_transcript lincRNA MGP_BALBcJ_T0038251.1 MGP_BALBcJ_G0020942.1 mouse_genomes_project 14 606356 619850 - MGP_BALBcJ_P0038251 Fam107a protein_coding protein_coding MGP_BALBcJ_T0038252.1 MGP_BALBcJ_G0020942.1 mouse_genomes_project 14 606356 619852 - MGP_BALBcJ_P0038252 Fam107a protein_coding protein_coding MGP_BALBcJ_T0038253.1 MGP_BALBcJ_G0020942.1 mouse_genomes_project 14 607638 628053 - MGP_BALBcJ_P0038253 Fam107a protein_coding protein_coding MGP_BALBcJ_T0038254.1 MGP_BALBcJ_G0020942.1 mouse_genomes_project 14 609621 619868 - MGP_BALBcJ_P0038254 Fam107a protein_coding protein_coding MGP_BALBcJ_T0006683.1 MGP_BALBcJ_G0005519.1 mouse_genomes_project 14 49771954 49775036 - Gm16973 lincRNA lincRNA MGP_BALBcJ_T0006684.1 MGP_BALBcJ_G0005519.1 mouse_genomes_project 14 49773021 49776943 - Gm16973 lincRNA lincRNA MGP_BALBcJ_T0100710.1 MGP_BALBcJ_G0038746.1 mouse_genomes_project 14 88408348 88408474 + Gm24680 snoRNA snoRNA MGP_BALBcJ_T0002590.1 MGP_BALBcJ_G0002487.1 mouse_genomes_project 14 45534423 45534972 + MGP_BALBcJ_P0002590 Trav3-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0012978.1 MGP_BALBcJ_G0011075.1 mouse_genomes_project 14 43371442 43371725 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098501.1 MGP_BALBcJ_G0036555.1 mouse_genomes_project 14 4739112 4739222 - n-R5s45 rRNA rRNA MGP_BALBcJ_T0017392.1 MGP_BALBcJ_G0015224.1 mouse_genomes_project 14 115878759 115882270 - A330035P11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017393.1 MGP_BALBcJ_G0015224.1 mouse_genomes_project 14 115879692 115882291 - A330035P11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017339.1 MGP_BALBcJ_G0015204.1 mouse_genomes_project 14 12049711 12050764 + processed_transcript processed_transcript MGP_BALBcJ_T0038552.1 MGP_BALBcJ_G0021031.1 mouse_genomes_project 14 18553761 18560570 + MGP_BALBcJ_P0038552 protein_coding protein_coding MGP_BALBcJ_T0038557.1 MGP_BALBcJ_G0021031.1 mouse_genomes_project 14 18556781 18563960 + MGP_BALBcJ_P0038557 protein_coding protein_coding MGP_BALBcJ_T0038411.1 MGP_BALBcJ_G0020999.1 mouse_genomes_project 14 13296256 13359343 - MGP_BALBcJ_P0038411 Camk2g protein_coding unknown_likely_coding MGP_BALBcJ_T0038412.1 MGP_BALBcJ_G0020999.1 mouse_genomes_project 14 13296261 13359466 - MGP_BALBcJ_P0038412 Camk2g protein_coding protein_coding MGP_BALBcJ_T0038413.1 MGP_BALBcJ_G0020999.1 mouse_genomes_project 14 13296261 13359466 - MGP_BALBcJ_P0038413 Camk2g protein_coding protein_coding MGP_BALBcJ_T0038414.1 MGP_BALBcJ_G0020999.1 mouse_genomes_project 14 13296261 13359466 - MGP_BALBcJ_P0038414 Camk2g protein_coding protein_coding MGP_BALBcJ_T0002629.1 MGP_BALBcJ_G0002519.1 mouse_genomes_project 14 46739513 46739792 + MGP_BALBcJ_P0002629 TR_V_gene TR_V_gene MGP_BALBcJ_T0003502.1 MGP_BALBcJ_G0003187.1 mouse_genomes_project 14 13199201 13202241 + 2810402E24Rik antisense antisense MGP_BALBcJ_T0099419.1 MGP_BALBcJ_G0037455.1 mouse_genomes_project 14 54465459 54465563 - Gm25716 snRNA snRNA MGP_BALBcJ_T0040192.1 MGP_BALBcJ_G0021569.1 mouse_genomes_project 14 73133256 73154995 + MGP_BALBcJ_P0040192 Olfm4 protein_coding protein_coding MGP_BALBcJ_T0040193.1 MGP_BALBcJ_G0021569.1 mouse_genomes_project 14 73133279 73154995 + MGP_BALBcJ_P0040193 Olfm4 protein_coding unknown_likely_coding MGP_BALBcJ_T0039777.1 MGP_BALBcJ_G0021411.1 mouse_genomes_project 14 55519838 55585659 - MGP_BALBcJ_P0039777 Gucy1b2 protein_coding protein_coding MGP_BALBcJ_T0039778.1 MGP_BALBcJ_G0021411.1 mouse_genomes_project 14 55519953 55585656 - MGP_BALBcJ_P0039778 Gucy1b2 protein_coding protein_coding MGP_BALBcJ_T0039779.1 MGP_BALBcJ_G0021411.1 mouse_genomes_project 14 55546275 55584162 - MGP_BALBcJ_P0039779 Gucy1b2 protein_coding protein_coding MGP_BALBcJ_T0039372.1 MGP_BALBcJ_G0021273.1 mouse_genomes_project 14 47444489 47451984 + MGP_BALBcJ_P0039372 Lrp10 protein_coding protein_coding MGP_BALBcJ_T0038894.1 MGP_BALBcJ_G0021120.1 mouse_genomes_project 14 26654134 26661327 - MGP_BALBcJ_P0038894 Gprin2 protein_coding protein_coding MGP_BALBcJ_T0038267.1 MGP_BALBcJ_G0020947.1 mouse_genomes_project 14 3519915 3524011 + MGP_BALBcJ_P0038267 Rpl21-ps4 protein_coding protein_coding MGP_BALBcJ_T0039833.1 MGP_BALBcJ_G0021436.1 mouse_genomes_project 14 57276096 57285471 + MGP_BALBcJ_P0039833 Prss52 protein_coding protein_coding MGP_BALBcJ_T0039591.1 MGP_BALBcJ_G0021327.1 mouse_genomes_project 14 48719497 48732981 - MGP_BALBcJ_P0039591 Tgm1 protein_coding protein_coding MGP_BALBcJ_T0039592.1 MGP_BALBcJ_G0021327.1 mouse_genomes_project 14 48719497 48732981 - MGP_BALBcJ_P0039592 Tgm1 protein_coding protein_coding MGP_BALBcJ_T0039593.1 MGP_BALBcJ_G0021327.1 mouse_genomes_project 14 48719497 48732577 - MGP_BALBcJ_P0039593 Tgm1 protein_coding protein_coding MGP_BALBcJ_T0012964.1 MGP_BALBcJ_G0011061.1 mouse_genomes_project 14 18682022 18682871 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100674.1 MGP_BALBcJ_G0038710.1 mouse_genomes_project 14 18810693 18810824 + Gm24031 snoRNA snoRNA MGP_BALBcJ_T0038388.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13056724 13103937 - MGP_BALBcJ_P0038388 Ppp3cb protein_coding protein_coding MGP_BALBcJ_T0038389.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13057228 13103911 - MGP_BALBcJ_P0038389 Ppp3cb protein_coding protein_coding MGP_BALBcJ_T0038390.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13057390 13103876 - MGP_BALBcJ_P0038390 Ppp3cb protein_coding protein_coding MGP_BALBcJ_T0038391.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13058912 13061131 - Ppp3cb protein_coding retained_intron MGP_BALBcJ_T0038392.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13065006 13103804 - MGP_BALBcJ_P0038392 Ppp3cb protein_coding protein_coding MGP_BALBcJ_T0038393.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13066784 13073352 - Ppp3cb protein_coding retained_intron MGP_BALBcJ_T0038394.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13072783 13078057 - Ppp3cb protein_coding retained_intron MGP_BALBcJ_T0038395.1 MGP_BALBcJ_G0020990.1 mouse_genomes_project 14 13077943 13081374 - Ppp3cb protein_coding retained_intron MGP_BALBcJ_T0038277.1 MGP_BALBcJ_G0020951.1 mouse_genomes_project 14 4684168 5137974 - MGP_BALBcJ_P0038277 Cadps protein_coding protein_coding MGP_BALBcJ_T0038278.1 MGP_BALBcJ_G0020951.1 mouse_genomes_project 14 4684170 5137974 - MGP_BALBcJ_P0038278 Cadps protein_coding protein_coding MGP_BALBcJ_T0038279.1 MGP_BALBcJ_G0020951.1 mouse_genomes_project 14 4684170 5137974 - MGP_BALBcJ_P0038279 Cadps protein_coding protein_coding MGP_BALBcJ_T0038280.1 MGP_BALBcJ_G0020951.1 mouse_genomes_project 14 4684170 5137974 - MGP_BALBcJ_P0038280 Cadps protein_coding protein_coding MGP_BALBcJ_T0040225.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95002714 95166924 - MGP_BALBcJ_P0040225 Tbc1d4 protein_coding unknown_likely_coding MGP_BALBcJ_T0040226.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95002716 95167656 - MGP_BALBcJ_P0040226 Tbc1d4 protein_coding protein_coding MGP_BALBcJ_T0040227.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95002724 95023822 - Tbc1d4 protein_coding retained_intron MGP_BALBcJ_T0040228.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95002724 95067323 - MGP_BALBcJ_P0040228 Tbc1d4 protein_coding protein_coding MGP_BALBcJ_T0040229.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95004079 95167109 - MGP_BALBcJ_P0040229 Tbc1d4 protein_coding protein_coding MGP_BALBcJ_T0040230.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95023170 95167455 - Tbc1d4 protein_coding retained_intron MGP_BALBcJ_T0040231.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95023392 95167290 - Tbc1d4 protein_coding retained_intron MGP_BALBcJ_T0040232.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95023392 95167290 - Tbc1d4 protein_coding retained_intron MGP_BALBcJ_T0040233.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95023561 95061110 - MGP_BALBcJ_P0040233 Tbc1d4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040234.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95023572 95167814 - MGP_BALBcJ_P0040234 Tbc1d4 protein_coding protein_coding MGP_BALBcJ_T0040235.1 MGP_BALBcJ_G0021585.1 mouse_genomes_project 14 95064703 95067267 - Tbc1d4 protein_coding retained_intron MGP_BALBcJ_T0098325.1 MGP_BALBcJ_G0036379.1 mouse_genomes_project 14 13597026 13607012 - pseudogene pseudogene MGP_BALBcJ_T0039651.1 MGP_BALBcJ_G0021366.1 mouse_genomes_project 14 50197591 50203582 - MGP_BALBcJ_P0039651 Gjb2 protein_coding protein_coding MGP_BALBcJ_T0006712.1 MGP_BALBcJ_G0005540.1 mouse_genomes_project 14 108762702 108766551 + Mir17hg lincRNA lincRNA MGP_BALBcJ_T0039990.1 MGP_BALBcJ_G0021498.1 mouse_genomes_project 14 63208833 63236251 - MGP_BALBcJ_P0039990 Sorbs3 protein_coding protein_coding MGP_BALBcJ_T0039991.1 MGP_BALBcJ_G0021498.1 mouse_genomes_project 14 63209535 63234498 - MGP_BALBcJ_P0039991 Sorbs3 protein_coding unknown_likely_coding MGP_BALBcJ_T0039950.1 MGP_BALBcJ_G0021483.1 mouse_genomes_project 14 62521980 62526936 - MGP_BALBcJ_P0039950 protein_coding protein_coding MGP_BALBcJ_T0009977.1 MGP_BALBcJ_G0008102.1 mouse_genomes_project 14 57750318 57750405 + Mir3078 miRNA miRNA MGP_BALBcJ_T0009949.1 MGP_BALBcJ_G0008074.1 mouse_genomes_project 14 10551902 10551981 + Gm44469 miRNA miRNA MGP_BALBcJ_T0039445.1 MGP_BALBcJ_G0021297.1 mouse_genomes_project 14 47936865 47962390 - MGP_BALBcJ_P0039445 Myh6 protein_coding protein_coding MGP_BALBcJ_T0039446.1 MGP_BALBcJ_G0021297.1 mouse_genomes_project 14 47953298 47954133 - Myh6 protein_coding retained_intron MGP_BALBcJ_T0039447.1 MGP_BALBcJ_G0021297.1 mouse_genomes_project 14 47959804 47962324 - MGP_BALBcJ_P0039447 Myh6 protein_coding protein_coding MGP_BALBcJ_T0039448.1 MGP_BALBcJ_G0021297.1 mouse_genomes_project 14 47959804 47962354 - MGP_BALBcJ_P0039448 Myh6 protein_coding protein_coding MGP_BALBcJ_T0039449.1 MGP_BALBcJ_G0021297.1 mouse_genomes_project 14 47961115 47962676 - MGP_BALBcJ_P0039449 Myh6 protein_coding protein_coding MGP_BALBcJ_T0038511.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18034109 18114615 + Zmiz1 protein_coding retained_intron MGP_BALBcJ_T0038512.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18034148 18245159 + MGP_BALBcJ_P0038512 Zmiz1 protein_coding protein_coding MGP_BALBcJ_T0038513.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18034191 18243135 + MGP_BALBcJ_P0038513 Zmiz1 protein_coding protein_coding MGP_BALBcJ_T0038514.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18034216 18227591 + Zmiz1 protein_coding retained_intron MGP_BALBcJ_T0038515.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18034479 18148765 + Zmiz1 protein_coding processed_transcript MGP_BALBcJ_T0038516.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18184495 18221647 + Zmiz1 protein_coding processed_transcript MGP_BALBcJ_T0038517.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18184976 18223750 + MGP_BALBcJ_P0038517 Zmiz1 protein_coding protein_coding MGP_BALBcJ_T0038518.1 MGP_BALBcJ_G0021017.1 mouse_genomes_project 14 18235246 18236822 + Zmiz1 protein_coding retained_intron MGP_BALBcJ_T0038268.1 MGP_BALBcJ_G0020948.1 mouse_genomes_project 14 3854891 4552325 + MGP_BALBcJ_P0038268 Ptprg protein_coding protein_coding MGP_BALBcJ_T0038269.1 MGP_BALBcJ_G0020948.1 mouse_genomes_project 14 3854912 4548876 + MGP_BALBcJ_P0038269 Ptprg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038270.1 MGP_BALBcJ_G0020948.1 mouse_genomes_project 14 3854940 4267385 + Ptprg protein_coding retained_intron MGP_BALBcJ_T0038271.1 MGP_BALBcJ_G0020948.1 mouse_genomes_project 14 4399405 4430553 + MGP_BALBcJ_P0038271 Ptprg protein_coding protein_coding MGP_BALBcJ_T0038272.1 MGP_BALBcJ_G0020948.1 mouse_genomes_project 14 4499708 4548875 + MGP_BALBcJ_P0038272 Ptprg protein_coding protein_coding MGP_BALBcJ_T0038273.1 MGP_BALBcJ_G0020948.1 mouse_genomes_project 14 4528525 4533139 + Ptprg protein_coding processed_transcript MGP_BALBcJ_T0100705.1 MGP_BALBcJ_G0038741.1 mouse_genomes_project 14 80627454 80627597 + Gm23278 snoRNA snoRNA MGP_BALBcJ_T0039553.1 MGP_BALBcJ_G0021319.1 mouse_genomes_project 14 48619613 48634207 + MGP_BALBcJ_P0039553 Rec8 protein_coding protein_coding MGP_BALBcJ_T0039554.1 MGP_BALBcJ_G0021319.1 mouse_genomes_project 14 48619759 48620393 + Rec8 protein_coding retained_intron MGP_BALBcJ_T0039555.1 MGP_BALBcJ_G0021319.1 mouse_genomes_project 14 48632380 48633322 + Rec8 protein_coding retained_intron MGP_BALBcJ_T0039556.1 MGP_BALBcJ_G0021319.1 mouse_genomes_project 14 48633730 48634207 + Rec8 protein_coding retained_intron MGP_BALBcJ_T0040114.1 MGP_BALBcJ_G0021535.1 mouse_genomes_project 14 68506362 68576308 + MGP_BALBcJ_P0040114 Siah3 protein_coding protein_coding MGP_BALBcJ_T0002546.1 MGP_BALBcJ_G0002449.1 mouse_genomes_project 14 47201720 47201782 + MGP_BALBcJ_P0002546 Traj6 TR_J_gene TR_J_gene MGP_BALBcJ_T0039182.1 MGP_BALBcJ_G0021226.1 mouse_genomes_project 14 43782085 43782630 - MGP_BALBcJ_P0039182 Rnase12 protein_coding protein_coding MGP_BALBcJ_T0040048.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66156503 66172948 + Rcbtb2 protein_coding retained_intron MGP_BALBcJ_T0040049.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66156503 66184461 + MGP_BALBcJ_P0040049 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040050.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160271 66186843 + MGP_BALBcJ_P0040050 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040051.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160293 66188633 + MGP_BALBcJ_P0040051 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040052.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160442 66172947 + Rcbtb2 protein_coding retained_intron MGP_BALBcJ_T0040053.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160458 66184512 + MGP_BALBcJ_P0040053 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040054.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160598 66223174 + MGP_BALBcJ_P0040054 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040055.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160727 66186907 + MGP_BALBcJ_P0040055 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040056.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160744 66186208 + Rcbtb2 protein_coding retained_intron MGP_BALBcJ_T0040057.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160752 66172527 + Rcbtb2 protein_coding retained_intron MGP_BALBcJ_T0040058.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160797 66206424 + MGP_BALBcJ_P0040058 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040059.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160811 66205539 + MGP_BALBcJ_P0040059 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040060.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160834 66206595 + MGP_BALBcJ_P0040060 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040061.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160845 66172901 + Rcbtb2 protein_coding retained_intron MGP_BALBcJ_T0040062.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160845 66188966 + MGP_BALBcJ_P0040062 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040063.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160851 66206437 + MGP_BALBcJ_P0040063 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040064.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66160892 66186974 + MGP_BALBcJ_P0040064 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040065.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66161135 66184093 + MGP_BALBcJ_P0040065 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040066.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66184063 66204979 + MGP_BALBcJ_P0040066 Rcbtb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040067.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66184063 66204976 + MGP_BALBcJ_P0040067 Rcbtb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040068.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66196260 66204895 + MGP_BALBcJ_P0040068 Rcbtb2 protein_coding protein_coding MGP_BALBcJ_T0040069.1 MGP_BALBcJ_G0021519.1 mouse_genomes_project 14 66196827 66205059 + Rcbtb2 protein_coding retained_intron MGP_BALBcJ_T0038844.1 MGP_BALBcJ_G0021098.1 mouse_genomes_project 14 24910058 24912471 - MGP_BALBcJ_P0038844 Slc18a3 protein_coding protein_coding MGP_BALBcJ_T0099409.1 MGP_BALBcJ_G0037445.1 mouse_genomes_project 14 42138750 42138889 - Gm22116 snRNA snRNA MGP_BALBcJ_T0003521.1 MGP_BALBcJ_G0003203.1 mouse_genomes_project 14 38116845 38127578 + Gm15601 antisense antisense MGP_BALBcJ_T0039255.1 MGP_BALBcJ_G0021251.1 mouse_genomes_project 14 44999596 45031842 - MGP_BALBcJ_P0039255 Hnrnpc protein_coding protein_coding MGP_BALBcJ_T0039256.1 MGP_BALBcJ_G0021251.1 mouse_genomes_project 14 44999596 45031842 - MGP_BALBcJ_P0039256 Hnrnpc protein_coding protein_coding MGP_BALBcJ_T0039257.1 MGP_BALBcJ_G0021251.1 mouse_genomes_project 14 45001349 45011481 - MGP_BALBcJ_P0039257 Hnrnpc protein_coding unknown_likely_coding MGP_BALBcJ_T0039622.1 MGP_BALBcJ_G0021346.1 mouse_genomes_project 14 49149836 49152530 - MGP_BALBcJ_P0039622 Ctsg protein_coding protein_coding MGP_BALBcJ_T0003566.1 MGP_BALBcJ_G0003237.1 mouse_genomes_project 14 115642849 115644394 - 1810041H14Rik antisense antisense MGP_BALBcJ_T0003567.1 MGP_BALBcJ_G0003237.1 mouse_genomes_project 14 115642935 115644628 - 1810041H14Rik antisense antisense MGP_BALBcJ_T0003568.1 MGP_BALBcJ_G0003237.1 mouse_genomes_project 14 115642983 115645533 - 1810041H14Rik antisense antisense MGP_BALBcJ_T0039528.1 MGP_BALBcJ_G0021315.1 mouse_genomes_project 14 48574313 48578759 - MGP_BALBcJ_P0039528 Emc9 protein_coding protein_coding MGP_BALBcJ_T0039529.1 MGP_BALBcJ_G0021315.1 mouse_genomes_project 14 48574318 48575222 - Emc9 protein_coding retained_intron MGP_BALBcJ_T0039530.1 MGP_BALBcJ_G0021315.1 mouse_genomes_project 14 48574319 48579115 - MGP_BALBcJ_P0039530 Emc9 protein_coding protein_coding MGP_BALBcJ_T0039531.1 MGP_BALBcJ_G0021315.1 mouse_genomes_project 14 48577186 48579024 - Emc9 protein_coding retained_intron MGP_BALBcJ_T0003547.1 MGP_BALBcJ_G0003223.1 mouse_genomes_project 14 56771707 56776494 - Gm15918 antisense antisense MGP_BALBcJ_T0006639.1 MGP_BALBcJ_G0005489.1 mouse_genomes_project 14 15881004 15882357 - A830039N20Rik lincRNA lincRNA MGP_BALBcJ_T0017369.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69757947 69772940 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0017370.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69762761 69772863 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0017371.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69762774 69772879 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0017372.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69762774 69765031 + 1700108F19Rik processed_transcript retained_intron MGP_BALBcJ_T0017373.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69762802 69772866 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0017374.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69762805 69765666 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0017375.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69762849 69765666 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0017376.1 MGP_BALBcJ_G0015215.1 mouse_genomes_project 14 69767565 69772658 + 1700108F19Rik processed_transcript lincRNA MGP_BALBcJ_T0009991.1 MGP_BALBcJ_G0008116.1 mouse_genomes_project 14 96533415 96533499 - Mir5130 miRNA miRNA MGP_BALBcJ_T0038689.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380467 23493753 + MGP_BALBcJ_P0038689 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038690.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380467 23496557 + MGP_BALBcJ_P0038690 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038691.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380478 23388972 + MGP_BALBcJ_P0038691 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038692.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380486 23456715 + MGP_BALBcJ_P0038692 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038693.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380499 23493819 + MGP_BALBcJ_P0038693 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038694.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380506 23388940 + MGP_BALBcJ_P0038694 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038695.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380528 23393664 + Pbrm1 protein_coding processed_transcript MGP_BALBcJ_T0038696.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23380537 23493971 + MGP_BALBcJ_P0038696 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038697.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386901 23488797 + MGP_BALBcJ_P0038697 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038698.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386901 23493818 + MGP_BALBcJ_P0038698 Pbrm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038699.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386904 23493800 + MGP_BALBcJ_P0038699 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038700.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386904 23493799 + MGP_BALBcJ_P0038700 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038701.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386904 23494953 + MGP_BALBcJ_P0038701 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038702.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386904 23493819 + MGP_BALBcJ_P0038702 Pbrm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038703.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23386905 23495006 + MGP_BALBcJ_P0038703 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038704.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23388919 23459161 + MGP_BALBcJ_P0038704 Pbrm1 protein_coding protein_coding MGP_BALBcJ_T0038705.1 MGP_BALBcJ_G0021069.1 mouse_genomes_project 14 23458320 23462157 + Pbrm1 protein_coding retained_intron MGP_BALBcJ_T0099412.1 MGP_BALBcJ_G0037448.1 mouse_genomes_project 14 43648051 43648155 + Gm24689 snRNA snRNA MGP_BALBcJ_T0039648.1 MGP_BALBcJ_G0021363.1 mouse_genomes_project 14 50110345 50110762 + MGP_BALBcJ_P0039648 protein_coding protein_coding MGP_BALBcJ_T0006702.1 MGP_BALBcJ_G0005532.1 mouse_genomes_project 14 63233937 63246291 + Gm26908 lincRNA lincRNA MGP_BALBcJ_T0039202.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819631 44826657 + MGP_BALBcJ_P0039202 Mettl17 protein_coding protein_coding MGP_BALBcJ_T0039203.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819665 44826649 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039204.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819667 44824378 + MGP_BALBcJ_P0039204 Mettl17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039205.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819678 44826582 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039206.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819678 44826582 + MGP_BALBcJ_P0039206 Mettl17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039207.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819678 44826582 + MGP_BALBcJ_P0039207 Mettl17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039208.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819701 44824096 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039209.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819707 44820448 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039210.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819724 44827665 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039211.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819727 44823692 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039212.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819735 44823692 + MGP_BALBcJ_P0039212 Mettl17 protein_coding protein_coding MGP_BALBcJ_T0039213.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819735 44826524 + MGP_BALBcJ_P0039213 Mettl17 protein_coding protein_coding MGP_BALBcJ_T0039214.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819741 44822043 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039215.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44819743 44820452 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0039216.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44820191 44825516 + MGP_BALBcJ_P0039216 Mettl17 protein_coding protein_coding MGP_BALBcJ_T0039217.1 MGP_BALBcJ_G0021242.1 mouse_genomes_project 14 44821949 44823807 + Mettl17 protein_coding retained_intron MGP_BALBcJ_T0002531.1 MGP_BALBcJ_G0002434.1 mouse_genomes_project 14 47184666 47184729 + MGP_BALBcJ_P0002531 Traj24 TR_J_gene TR_J_gene MGP_BALBcJ_T0039323.1 MGP_BALBcJ_G0021261.1 mouse_genomes_project 14 45334411 45342380 - MGP_BALBcJ_P0039323 protein_coding protein_coding MGP_BALBcJ_T0100686.1 MGP_BALBcJ_G0038722.1 mouse_genomes_project 14 45135718 45135828 - Snord8 snoRNA snoRNA MGP_BALBcJ_T0098506.1 MGP_BALBcJ_G0036560.1 mouse_genomes_project 14 66991764 66991870 - Gm22164 rRNA rRNA MGP_BALBcJ_T0002616.1 MGP_BALBcJ_G0002510.1 mouse_genomes_project 14 46290453 46291096 + MGP_BALBcJ_P0002616 Trav8n-2 TR_V_gene TR_V_gene MGP_BALBcJ_T0002613.1 MGP_BALBcJ_G0002507.1 mouse_genomes_project 14 46097498 46098026 + MGP_BALBcJ_P0002613 TR_V_gene TR_V_gene MGP_BALBcJ_T0098508.1 MGP_BALBcJ_G0036562.1 mouse_genomes_project 14 70612329 70612438 + n-R5s48 rRNA rRNA MGP_BALBcJ_T0038852.1 MGP_BALBcJ_G0021103.1 mouse_genomes_project 14 25286286 25289114 + MGP_BALBcJ_P0038852 Fam170b protein_coding protein_coding MGP_BALBcJ_T0100706.1 MGP_BALBcJ_G0038742.1 mouse_genomes_project 14 83096987 83097119 + Gm25415 snoRNA snoRNA MGP_BALBcJ_T0038885.1 MGP_BALBcJ_G0021112.1 mouse_genomes_project 14 26402061 26408459 + MGP_BALBcJ_P0038885 Gdf2 protein_coding protein_coding MGP_BALBcJ_T0040165.1 MGP_BALBcJ_G0021556.1 mouse_genomes_project 14 71671616 71847017 - MGP_BALBcJ_P0040165 Dgkh protein_coding protein_coding MGP_BALBcJ_T0040159.1 MGP_BALBcJ_G0021553.1 mouse_genomes_project 14 71170825 71178788 - MGP_BALBcJ_P0040159 Fam216b protein_coding protein_coding MGP_BALBcJ_T0040160.1 MGP_BALBcJ_G0021553.1 mouse_genomes_project 14 71171517 71178780 - MGP_BALBcJ_P0040160 Fam216b protein_coding protein_coding MGP_BALBcJ_T0040161.1 MGP_BALBcJ_G0021553.1 mouse_genomes_project 14 71172547 71178762 - MGP_BALBcJ_P0040161 Fam216b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039944.1 MGP_BALBcJ_G0021479.1 mouse_genomes_project 14 62404552 62408265 + MGP_BALBcJ_P0039944 Nkx2-6 protein_coding protein_coding MGP_BALBcJ_T0009978.1 MGP_BALBcJ_G0008103.1 mouse_genomes_project 14 60301596 60301714 + Gm27647 miRNA miRNA MGP_BALBcJ_T0039180.1 MGP_BALBcJ_G0021224.1 mouse_genomes_project 14 43762563 43765976 - MGP_BALBcJ_P0039180 Rnase9 protein_coding protein_coding MGP_BALBcJ_T0003569.1 MGP_BALBcJ_G0003238.1 mouse_genomes_project 14 116015404 116019780 - 1700108J01Rik antisense antisense MGP_BALBcJ_T0012971.1 MGP_BALBcJ_G0011068.1 mouse_genomes_project 14 32496986 32497322 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098503.1 MGP_BALBcJ_G0036557.1 mouse_genomes_project 14 29317685 29317801 - n-R5s46 rRNA rRNA MGP_BALBcJ_T0006680.1 MGP_BALBcJ_G0005516.1 mouse_genomes_project 14 45123259 45139794 + Gm26590 lincRNA lincRNA MGP_BALBcJ_T0039254.1 MGP_BALBcJ_G0021250.1 mouse_genomes_project 14 44961062 44962969 - MGP_BALBcJ_P0039254 Olfr221 protein_coding protein_coding MGP_BALBcJ_T0017368.1 MGP_BALBcJ_G0015214.1 mouse_genomes_project 14 66196196 66209624 - Gm17233 processed_transcript processed_transcript MGP_BALBcJ_T0040218.1 MGP_BALBcJ_G0021579.1 mouse_genomes_project 14 92612556 92642009 + MGP_BALBcJ_P0040218 Bora protein_coding protein_coding MGP_BALBcJ_T0039878.1 MGP_BALBcJ_G0021454.1 mouse_genomes_project 14 59152618 59176555 - MGP_BALBcJ_P0039878 Gulo protein_coding protein_coding MGP_BALBcJ_T0002532.1 MGP_BALBcJ_G0002435.1 mouse_genomes_project 14 47185109 47185169 + MGP_BALBcJ_P0002532 TR_J_gene TR_J_gene MGP_BALBcJ_T0012973.1 MGP_BALBcJ_G0011070.1 mouse_genomes_project 14 37724867 37725777 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100717.1 MGP_BALBcJ_G0038753.1 mouse_genomes_project 14 94847421 94847557 + Gm26173 snoRNA snoRNA MGP_BALBcJ_T0099043.1 MGP_BALBcJ_G0037083.1 mouse_genomes_project 14 60910875 60912817 - Gm20667 sense_overlapping sense_overlapping MGP_BALBcJ_T0006657.1 MGP_BALBcJ_G0005500.1 mouse_genomes_project 14 24912692 24931349 + Gm2990 lincRNA lincRNA MGP_BALBcJ_T0040388.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116708717 116773226 - MGP_BALBcJ_P0040388 Tmtc4 protein_coding protein_coding MGP_BALBcJ_T0040389.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116708724 116773160 - MGP_BALBcJ_P0040389 Tmtc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040390.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116709477 116773085 - MGP_BALBcJ_P0040390 Tmtc4 protein_coding protein_coding MGP_BALBcJ_T0040391.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116709506 116773085 - MGP_BALBcJ_P0040391 Tmtc4 protein_coding protein_coding MGP_BALBcJ_T0040392.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116709652 116725777 - Tmtc4 protein_coding processed_transcript MGP_BALBcJ_T0040393.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116714551 116718879 - Tmtc4 protein_coding retained_intron MGP_BALBcJ_T0040394.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116722230 116773183 - Tmtc4 protein_coding retained_intron MGP_BALBcJ_T0040395.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116734492 116773218 - MGP_BALBcJ_P0040395 Tmtc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040396.1 MGP_BALBcJ_G0021642.1 mouse_genomes_project 14 116763253 116773112 - Tmtc4 protein_coding processed_transcript MGP_BALBcJ_T0038509.1 MGP_BALBcJ_G0021016.1 mouse_genomes_project 14 17101610 17106386 + MGP_BALBcJ_P0038509 Rps24 protein_coding protein_coding MGP_BALBcJ_T0038510.1 MGP_BALBcJ_G0021016.1 mouse_genomes_project 14 17101610 17107100 + MGP_BALBcJ_P0038510 Rps24 protein_coding protein_coding MGP_BALBcJ_T0100704.1 MGP_BALBcJ_G0038740.1 mouse_genomes_project 14 76610844 76610978 + Gm24774 snoRNA snoRNA MGP_BALBcJ_T0102244.1 MGP_BALBcJ_G0040060.1 mouse_genomes_project 14 44776556 44779158 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011352.1 MGP_BALBcJ_G0009477.1 mouse_genomes_project 14 49612594 49612701 + Gm22431 misc_RNA misc_RNA MGP_BALBcJ_T0039225.1 MGP_BALBcJ_G0021246.1 mouse_genomes_project 14 44857806 44858420 - MGP_BALBcJ_P0039225 Rnase13 protein_coding protein_coding MGP_BALBcJ_T0009979.1 MGP_BALBcJ_G0008104.1 mouse_genomes_project 14 60503222 60503317 - Gm23178 miRNA miRNA MGP_BALBcJ_T0009976.1 MGP_BALBcJ_G0008101.1 mouse_genomes_project 14 57749790 57749875 + Mir124a-1 miRNA miRNA MGP_BALBcJ_T0039605.1 MGP_BALBcJ_G0021333.1 mouse_genomes_project 14 48785401 48791041 + MGP_BALBcJ_P0039605 Ltb4r1 protein_coding protein_coding MGP_BALBcJ_T0040014.1 MGP_BALBcJ_G0021506.1 mouse_genomes_project 14 63563107 63570612 + MGP_BALBcJ_P0040014 Lgi3 protein_coding protein_coding MGP_BALBcJ_T0038502.1 MGP_BALBcJ_G0021014.1 mouse_genomes_project 14 16883253 16907952 + MGP_BALBcJ_P0038502 E330034G19Rik protein_coding protein_coding MGP_BALBcJ_T0038503.1 MGP_BALBcJ_G0021014.1 mouse_genomes_project 14 16883275 16898357 + MGP_BALBcJ_P0038503 E330034G19Rik protein_coding protein_coding MGP_BALBcJ_T0038504.1 MGP_BALBcJ_G0021014.1 mouse_genomes_project 14 16883323 16888323 + E330034G19Rik protein_coding retained_intron MGP_BALBcJ_T0038505.1 MGP_BALBcJ_G0021014.1 mouse_genomes_project 14 16883358 16907959 + MGP_BALBcJ_P0038505 E330034G19Rik protein_coding protein_coding MGP_BALBcJ_T0038506.1 MGP_BALBcJ_G0021014.1 mouse_genomes_project 14 16883371 16888092 + MGP_BALBcJ_P0038506 E330034G19Rik protein_coding protein_coding MGP_BALBcJ_T0038507.1 MGP_BALBcJ_G0021014.1 mouse_genomes_project 14 16883403 16907952 + MGP_BALBcJ_P0038507 E330034G19Rik protein_coding protein_coding MGP_BALBcJ_T0038604.1 MGP_BALBcJ_G0021045.1 mouse_genomes_project 14 19810600 19836622 - MGP_BALBcJ_P0038604 Ccdc66 protein_coding protein_coding MGP_BALBcJ_T0039785.1 MGP_BALBcJ_G0021414.1 mouse_genomes_project 14 55808306 55893843 - MGP_BALBcJ_P0039785 Ints6 protein_coding protein_coding MGP_BALBcJ_T0039786.1 MGP_BALBcJ_G0021414.1 mouse_genomes_project 14 55825373 55893389 - MGP_BALBcJ_P0039786 Ints6 protein_coding unknown_likely_coding MGP_BALBcJ_T0039720.1 MGP_BALBcJ_G0021388.1 mouse_genomes_project 14 52537452 52576294 - MGP_BALBcJ_P0039720 Setdb2 protein_coding protein_coding MGP_BALBcJ_T0039721.1 MGP_BALBcJ_G0021388.1 mouse_genomes_project 14 52537454 52576287 - MGP_BALBcJ_P0039721 Setdb2 protein_coding protein_coding MGP_BALBcJ_T0039722.1 MGP_BALBcJ_G0021388.1 mouse_genomes_project 14 52538169 52545446 - Setdb2 protein_coding retained_intron MGP_BALBcJ_T0039723.1 MGP_BALBcJ_G0021388.1 mouse_genomes_project 14 52558249 52576285 - MGP_BALBcJ_P0039723 Setdb2 protein_coding protein_coding MGP_BALBcJ_T0039724.1 MGP_BALBcJ_G0021388.1 mouse_genomes_project 14 52566371 52576283 - Setdb2 protein_coding processed_transcript MGP_BALBcJ_T0039103.1 MGP_BALBcJ_G0021182.1 mouse_genomes_project 14 41769660 41789516 + MGP_BALBcJ_P0039103 Naa30 protein_coding protein_coding MGP_BALBcJ_T0039104.1 MGP_BALBcJ_G0021182.1 mouse_genomes_project 14 41770000 41789673 + MGP_BALBcJ_P0039104 Naa30 protein_coding protein_coding MGP_BALBcJ_T0039105.1 MGP_BALBcJ_G0021182.1 mouse_genomes_project 14 41775296 41788015 + Naa30 protein_coding retained_intron MGP_BALBcJ_T0039106.1 MGP_BALBcJ_G0021182.1 mouse_genomes_project 14 41775917 41786897 + Naa30 protein_coding retained_intron MGP_BALBcJ_T0038428.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14045753 14083929 + MGP_BALBcJ_P0038428 Kat6b protein_coding protein_coding MGP_BALBcJ_T0038429.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14045778 14186779 + Kat6b protein_coding processed_transcript MGP_BALBcJ_T0038430.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14066606 14236519 + MGP_BALBcJ_P0038430 Kat6b protein_coding protein_coding MGP_BALBcJ_T0038431.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14066621 14236926 + MGP_BALBcJ_P0038431 Kat6b protein_coding protein_coding MGP_BALBcJ_T0038432.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14066690 14085461 + Kat6b protein_coding retained_intron MGP_BALBcJ_T0038433.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14066696 14235321 + MGP_BALBcJ_P0038433 Kat6b protein_coding unknown_likely_coding MGP_BALBcJ_T0038434.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14066704 14236581 + MGP_BALBcJ_P0038434 Kat6b protein_coding protein_coding MGP_BALBcJ_T0038435.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14067689 14186203 + Kat6b protein_coding retained_intron MGP_BALBcJ_T0038436.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14067721 14087122 + Kat6b protein_coding retained_intron MGP_BALBcJ_T0038437.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14067725 14185407 + Kat6b protein_coding retained_intron MGP_BALBcJ_T0038438.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14067728 14236926 + MGP_BALBcJ_P0038438 Kat6b protein_coding protein_coding MGP_BALBcJ_T0038439.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14083568 14235654 + MGP_BALBcJ_P0038439 Kat6b protein_coding protein_coding MGP_BALBcJ_T0038440.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14186762 14190342 + Kat6b protein_coding retained_intron MGP_BALBcJ_T0038441.1 MGP_BALBcJ_G0021004.1 mouse_genomes_project 14 14187343 14199381 + Kat6b protein_coding retained_intron MGP_BALBcJ_T0002523.1 MGP_BALBcJ_G0002426.1 mouse_genomes_project 14 47174781 47174847 + MGP_BALBcJ_P0002523 Traj32 TR_J_gene TR_J_gene MGP_BALBcJ_T0038297.1 MGP_BALBcJ_G0020959.1 mouse_genomes_project 14 6707825 6713966 + MGP_BALBcJ_P0038297 Olfr31 protein_coding protein_coding MGP_BALBcJ_T0038298.1 MGP_BALBcJ_G0020959.1 mouse_genomes_project 14 6713012 6713966 + MGP_BALBcJ_P0038298 Olfr31 protein_coding protein_coding MGP_BALBcJ_T0038295.1 MGP_BALBcJ_G0020958.1 mouse_genomes_project 14 6558117 6559140 - MGP_BALBcJ_P0038295 Olfr720 protein_coding protein_coding MGP_BALBcJ_T0038296.1 MGP_BALBcJ_G0020958.1 mouse_genomes_project 14 6558719 6573944 - MGP_BALBcJ_P0038296 Olfr720 protein_coding protein_coding MGP_BALBcJ_T0039631.1 MGP_BALBcJ_G0021355.1 mouse_genomes_project 14 49478963 49601743 + MGP_BALBcJ_P0039631 Rnf17 protein_coding protein_coding MGP_BALBcJ_T0003518.1 MGP_BALBcJ_G0003200.1 mouse_genomes_project 14 31381857 31443930 + Nrg3os antisense antisense MGP_BALBcJ_T0000906.1 MGP_BALBcJ_G0000837.1 mouse_genomes_project 14 48080791 48082973 - TEC TEC MGP_BALBcJ_T0039193.1 MGP_BALBcJ_G0021234.1 mouse_genomes_project 14 43909175 43909934 + MGP_BALBcJ_P0039193 Rnase2b protein_coding protein_coding MGP_BALBcJ_T0039597.1 MGP_BALBcJ_G0021329.1 mouse_genomes_project 14 48758506 48759147 - Dhrs1 protein_coding retained_intron MGP_BALBcJ_T0039598.1 MGP_BALBcJ_G0021329.1 mouse_genomes_project 14 48758506 48765085 - Dhrs1 protein_coding retained_intron MGP_BALBcJ_T0039599.1 MGP_BALBcJ_G0021329.1 mouse_genomes_project 14 48758508 48765176 - MGP_BALBcJ_P0039599 Dhrs1 protein_coding protein_coding MGP_BALBcJ_T0039600.1 MGP_BALBcJ_G0021329.1 mouse_genomes_project 14 48758720 48759631 - Dhrs1 protein_coding retained_intron MGP_BALBcJ_T0002624.1 MGP_BALBcJ_G0002515.1 mouse_genomes_project 14 46509281 46509853 + MGP_BALBcJ_P0002624 TR_V_gene TR_V_gene MGP_BALBcJ_T0039298.1 MGP_BALBcJ_G0021256.1 mouse_genomes_project 14 45203751 45226537 + MGP_BALBcJ_P0039298 Tox4 protein_coding protein_coding MGP_BALBcJ_T0039299.1 MGP_BALBcJ_G0021256.1 mouse_genomes_project 14 45204170 45222615 + Tox4 protein_coding retained_intron MGP_BALBcJ_T0039300.1 MGP_BALBcJ_G0021256.1 mouse_genomes_project 14 45204222 45204718 + Tox4 protein_coding retained_intron MGP_BALBcJ_T0039301.1 MGP_BALBcJ_G0021256.1 mouse_genomes_project 14 45204337 45218477 + Tox4 protein_coding retained_intron MGP_BALBcJ_T0039302.1 MGP_BALBcJ_G0021256.1 mouse_genomes_project 14 45209974 45218097 + Tox4 protein_coding processed_transcript MGP_BALBcJ_T0039121.1 MGP_BALBcJ_G0021188.1 mouse_genomes_project 14 42587615 42590841 - MGP_BALBcJ_P0039121 protein_coding protein_coding MGP_BALBcJ_T0038711.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514446 23516300 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038712.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514446 23518266 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038713.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514446 23515282 - MGP_BALBcJ_P0038713 Stab1 protein_coding protein_coding MGP_BALBcJ_T0038714.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514446 23544492 - MGP_BALBcJ_P0038714 Stab1 protein_coding protein_coding MGP_BALBcJ_T0038715.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514450 23521011 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038716.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514450 23515608 - Stab1 protein_coding processed_transcript MGP_BALBcJ_T0038717.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23514452 23519159 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038718.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23515402 23516377 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038719.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23517066 23518626 - MGP_BALBcJ_P0038719 Stab1 protein_coding protein_coding MGP_BALBcJ_T0038720.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23517817 23518431 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038721.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23532156 23532904 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038722.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23532156 23537349 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0038723.1 MGP_BALBcJ_G0021072.1 mouse_genomes_project 14 23534029 23544446 - Stab1 protein_coding retained_intron MGP_BALBcJ_T0039190.1 MGP_BALBcJ_G0021231.1 mouse_genomes_project 14 43856596 43859819 + MGP_BALBcJ_P0039190 Eddm3b protein_coding protein_coding MGP_BALBcJ_T0012983.1 MGP_BALBcJ_G0011080.1 mouse_genomes_project 14 47303391 47303717 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039124.1 MGP_BALBcJ_G0021191.1 mouse_genomes_project 14 42788078 42789602 + MGP_BALBcJ_P0039124 Olfr727 protein_coding protein_coding MGP_BALBcJ_T0101632.1 MGP_BALBcJ_G0039640.1 mouse_genomes_project 14 51990823 51991306 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101633.1 MGP_BALBcJ_G0039640.1 mouse_genomes_project 14 51991227 51992219 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0009961.1 MGP_BALBcJ_G0008086.1 mouse_genomes_project 14 38197815 38197908 - Mir5131 miRNA miRNA MGP_BALBcJ_T0038410.1 MGP_BALBcJ_G0020998.1 mouse_genomes_project 14 13283782 13295688 - MGP_BALBcJ_P0038410 Ndst2 protein_coding unknown_likely_coding MGP_BALBcJ_T0040147.1 MGP_BALBcJ_G0021547.1 mouse_genomes_project 14 70116018 70128872 - MGP_BALBcJ_P0040147 Lacc1 protein_coding protein_coding MGP_BALBcJ_T0040148.1 MGP_BALBcJ_G0021547.1 mouse_genomes_project 14 70124579 70129135 - Lacc1 protein_coding retained_intron MGP_BALBcJ_T0040149.1 MGP_BALBcJ_G0021547.1 mouse_genomes_project 14 70127185 70128311 - MGP_BALBcJ_P0040149 Lacc1 protein_coding protein_coding MGP_BALBcJ_T0100720.1 MGP_BALBcJ_G0038756.1 mouse_genomes_project 14 98531339 98531473 + Gm24280 snoRNA snoRNA MGP_BALBcJ_T0013014.1 MGP_BALBcJ_G0011111.1 mouse_genomes_project 14 98849145 98849702 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038356.1 MGP_BALBcJ_G0020975.1 mouse_genomes_project 14 11936086 11943795 - MGP_BALBcJ_P0038356 Gm9637 protein_coding protein_coding MGP_BALBcJ_T0038366.1 MGP_BALBcJ_G0020980.1 mouse_genomes_project 14 12704533 12746256 - MGP_BALBcJ_P0038366 Kcnk5 protein_coding protein_coding MGP_BALBcJ_T0040197.1 MGP_BALBcJ_G0021572.1 mouse_genomes_project 14 80688152 80784950 + MGP_BALBcJ_P0040197 Tdrd3 protein_coding protein_coding MGP_BALBcJ_T0040198.1 MGP_BALBcJ_G0021572.1 mouse_genomes_project 14 80688152 80815980 + MGP_BALBcJ_P0040198 Tdrd3 protein_coding protein_coding MGP_BALBcJ_T0040199.1 MGP_BALBcJ_G0021572.1 mouse_genomes_project 14 80688179 80815993 + MGP_BALBcJ_P0040199 Tdrd3 protein_coding protein_coding MGP_BALBcJ_T0040200.1 MGP_BALBcJ_G0021572.1 mouse_genomes_project 14 80728701 80751467 + MGP_BALBcJ_P0040200 Tdrd3 protein_coding protein_coding MGP_BALBcJ_T0040201.1 MGP_BALBcJ_G0021572.1 mouse_genomes_project 14 80743407 80757131 + MGP_BALBcJ_P0040201 Tdrd3 protein_coding protein_coding MGP_BALBcJ_T0012991.1 MGP_BALBcJ_G0011088.1 mouse_genomes_project 14 51221477 51221835 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013018.1 MGP_BALBcJ_G0011115.1 mouse_genomes_project 14 109271294 109271894 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009954.1 MGP_BALBcJ_G0008079.1 mouse_genomes_project 14 18401815 18401925 - Gm23701 miRNA miRNA MGP_BALBcJ_T0002602.1 MGP_BALBcJ_G0002497.1 mouse_genomes_project 14 45777516 45778047 + MGP_BALBcJ_P0002602 TR_V_gene TR_V_gene MGP_BALBcJ_T0038243.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 535459 569166 - MGP_BALBcJ_P0038243 Acox2 protein_coding protein_coding MGP_BALBcJ_T0038244.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 535459 569687 - MGP_BALBcJ_P0038244 Acox2 protein_coding protein_coding MGP_BALBcJ_T0038245.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 549925 556737 - Acox2 protein_coding processed_transcript MGP_BALBcJ_T0038246.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 554043 556764 - Acox2 protein_coding retained_intron MGP_BALBcJ_T0038247.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 558209 563856 - Acox2 protein_coding retained_intron MGP_BALBcJ_T0038248.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 563875 568205 - MGP_BALBcJ_P0038248 Acox2 protein_coding protein_coding MGP_BALBcJ_T0038249.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 565527 568488 - Acox2 protein_coding processed_transcript MGP_BALBcJ_T0038250.1 MGP_BALBcJ_G0020941.1 mouse_genomes_project 14 566256 567268 - Acox2 protein_coding retained_intron MGP_BALBcJ_T0006704.1 MGP_BALBcJ_G0005534.1 mouse_genomes_project 14 68189893 68190536 - Gm15628 lincRNA lincRNA MGP_BALBcJ_T0039200.1 MGP_BALBcJ_G0021241.1 mouse_genomes_project 14 44778394 44779262 + MGP_BALBcJ_P0039200 Ear6 protein_coding protein_coding MGP_BALBcJ_T0039201.1 MGP_BALBcJ_G0021241.1 mouse_genomes_project 14 44778463 44779262 + MGP_BALBcJ_P0039201 Ear6 protein_coding protein_coding MGP_BALBcJ_T0039615.1 MGP_BALBcJ_G0021339.1 mouse_genomes_project 14 48907279 48919490 + MGP_BALBcJ_P0039615 Khnyn protein_coding protein_coding MGP_BALBcJ_T0009952.1 MGP_BALBcJ_G0008077.1 mouse_genomes_project 14 16675832 16675886 + Mir7210 miRNA miRNA MGP_BALBcJ_T0006664.1 MGP_BALBcJ_G0005506.1 mouse_genomes_project 14 38969869 38987449 + Gm15221 lincRNA lincRNA MGP_BALBcJ_T0002507.1 MGP_BALBcJ_G0002411.1 mouse_genomes_project 14 47158573 47158634 + MGP_BALBcJ_P0002507 Traj48 TR_J_gene TR_J_gene MGP_BALBcJ_T0002508.1 MGP_BALBcJ_G0002411.1 mouse_genomes_project 14 47158574 47158634 + Traj48 TR_J_gene processed_transcript MGP_BALBcJ_T0002515.1 MGP_BALBcJ_G0002418.1 mouse_genomes_project 14 47164987 47165042 + MGP_BALBcJ_P0002515 Traj41 TR_J_gene TR_J_gene MGP_BALBcJ_T0012992.1 MGP_BALBcJ_G0011089.1 mouse_genomes_project 14 52550060 52550355 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100679.1 MGP_BALBcJ_G0038715.1 mouse_genomes_project 14 24633508 24633705 - Gm23946 snoRNA snoRNA MGP_BALBcJ_T0039647.1 MGP_BALBcJ_G0021362.1 mouse_genomes_project 14 50108624 50110757 + MGP_BALBcJ_P0039647 protein_coding protein_coding MGP_BALBcJ_T0038665.1 MGP_BALBcJ_G0021062.1 mouse_genomes_project 14 23239288 23255713 + MGP_BALBcJ_P0038665 Itih4 protein_coding protein_coding MGP_BALBcJ_T0038666.1 MGP_BALBcJ_G0021062.1 mouse_genomes_project 14 23239314 23255576 + MGP_BALBcJ_P0038666 Itih4 protein_coding protein_coding MGP_BALBcJ_T0038667.1 MGP_BALBcJ_G0021062.1 mouse_genomes_project 14 23239314 23255680 + MGP_BALBcJ_P0038667 Itih4 protein_coding protein_coding MGP_BALBcJ_T0038668.1 MGP_BALBcJ_G0021062.1 mouse_genomes_project 14 23239333 23255578 + MGP_BALBcJ_P0038668 Itih4 protein_coding protein_coding MGP_BALBcJ_T0038669.1 MGP_BALBcJ_G0021062.1 mouse_genomes_project 14 23252962 23255581 + Itih4 protein_coding retained_intron MGP_BALBcJ_T0038369.1 MGP_BALBcJ_G0020983.1 mouse_genomes_project 14 12878012 12907015 - MGP_BALBcJ_P0038369 Ecd protein_coding protein_coding MGP_BALBcJ_T0038850.1 MGP_BALBcJ_G0021101.1 mouse_genomes_project 14 25110324 25136229 - MGP_BALBcJ_P0038850 3425401B19Rik protein_coding protein_coding MGP_BALBcJ_T0013001.1 MGP_BALBcJ_G0011098.1 mouse_genomes_project 14 67774693 67788439 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099427.1 MGP_BALBcJ_G0037463.1 mouse_genomes_project 14 82792160 82792276 + Gm25886 snRNA snRNA MGP_BALBcJ_T0038559.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18726409 18850886 - MGP_BALBcJ_P0038559 Slmap protein_coding protein_coding MGP_BALBcJ_T0038560.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18726414 18787183 - MGP_BALBcJ_P0038560 Slmap protein_coding protein_coding MGP_BALBcJ_T0038561.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18726415 18773424 - MGP_BALBcJ_P0038561 Slmap protein_coding protein_coding MGP_BALBcJ_T0038562.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18726416 18849695 - MGP_BALBcJ_P0038562 Slmap protein_coding protein_coding MGP_BALBcJ_T0038563.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18726641 18849573 - MGP_BALBcJ_P0038563 Slmap protein_coding protein_coding MGP_BALBcJ_T0038564.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18726641 18849573 - MGP_BALBcJ_P0038564 Slmap protein_coding protein_coding MGP_BALBcJ_T0038565.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18727537 18850850 - MGP_BALBcJ_P0038565 Slmap protein_coding protein_coding MGP_BALBcJ_T0038566.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18727971 18773411 - MGP_BALBcJ_P0038566 Slmap protein_coding protein_coding MGP_BALBcJ_T0038567.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18735698 18756069 - MGP_BALBcJ_P0038567 Slmap protein_coding protein_coding MGP_BALBcJ_T0038568.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18740493 18755900 - Slmap protein_coding processed_transcript MGP_BALBcJ_T0038569.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18740569 18743346 - Slmap protein_coding retained_intron MGP_BALBcJ_T0038570.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18740792 18756135 - MGP_BALBcJ_P0038570 Slmap protein_coding protein_coding MGP_BALBcJ_T0038571.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18741518 18752466 - Slmap protein_coding retained_intron MGP_BALBcJ_T0038572.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18750404 18755983 - Slmap protein_coding retained_intron MGP_BALBcJ_T0038573.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18755868 18776933 - MGP_BALBcJ_P0038573 Slmap protein_coding protein_coding MGP_BALBcJ_T0038574.1 MGP_BALBcJ_G0021032.1 mouse_genomes_project 14 18773038 18776924 - Slmap protein_coding retained_intron MGP_BALBcJ_T0038387.1 MGP_BALBcJ_G0020989.1 mouse_genomes_project 14 13039906 13054268 - MGP_BALBcJ_P0038387 Mss51 protein_coding protein_coding MGP_BALBcJ_T0098513.1 MGP_BALBcJ_G0036567.1 mouse_genomes_project 14 112536923 112537046 - n-R5s51 rRNA rRNA MGP_BALBcJ_T0011356.1 MGP_BALBcJ_G0009481.1 mouse_genomes_project 14 54789704 54789960 + Gm27928 misc_RNA misc_RNA MGP_BALBcJ_T0039834.1 MGP_BALBcJ_G0021437.1 mouse_genomes_project 14 57294319 57629092 - MGP_BALBcJ_P0039834 Msra protein_coding protein_coding MGP_BALBcJ_T0039456.1 MGP_BALBcJ_G0021301.1 mouse_genomes_project 14 48051968 48095570 + MGP_BALBcJ_P0039456 Thtpa protein_coding protein_coding MGP_BALBcJ_T0039457.1 MGP_BALBcJ_G0021301.1 mouse_genomes_project 14 48053038 48095957 + Thtpa protein_coding processed_transcript MGP_BALBcJ_T0039458.1 MGP_BALBcJ_G0021301.1 mouse_genomes_project 14 48053574 48097031 + MGP_BALBcJ_P0039458 Thtpa protein_coding protein_coding MGP_BALBcJ_T0039463.1 MGP_BALBcJ_G0021301.1 mouse_genomes_project 14 48092828 48097031 + MGP_BALBcJ_P0039463 Thtpa protein_coding protein_coding MGP_BALBcJ_T0038543.1 MGP_BALBcJ_G0021028.1 mouse_genomes_project 14 18516281 18530300 + MGP_BALBcJ_P0038543 protein_coding protein_coding MGP_BALBcJ_T0038546.1 MGP_BALBcJ_G0021028.1 mouse_genomes_project 14 18516333 18530291 + MGP_BALBcJ_P0038546 protein_coding protein_coding MGP_BALBcJ_T0038384.1 MGP_BALBcJ_G0020988.1 mouse_genomes_project 14 13012805 13037182 - MGP_BALBcJ_P0038384 Anxa7 protein_coding protein_coding MGP_BALBcJ_T0038385.1 MGP_BALBcJ_G0020988.1 mouse_genomes_project 14 13012805 13037182 - MGP_BALBcJ_P0038385 Anxa7 protein_coding protein_coding MGP_BALBcJ_T0038386.1 MGP_BALBcJ_G0020988.1 mouse_genomes_project 14 13012822 13037012 - MGP_BALBcJ_P0038386 Anxa7 protein_coding unknown_likely_coding MGP_BALBcJ_T0011357.1 MGP_BALBcJ_G0009482.1 mouse_genomes_project 14 58363145 58363221 - Gm27263 misc_RNA misc_RNA MGP_BALBcJ_T0038679.1 MGP_BALBcJ_G0021065.1 mouse_genomes_project 14 23306488 23346970 + MGP_BALBcJ_P0038679 Nek4 protein_coding protein_coding MGP_BALBcJ_T0040300.1 MGP_BALBcJ_G0021605.1 mouse_genomes_project 14 102548336 102552585 - MGP_BALBcJ_P0040300 Slitrk1 protein_coding protein_coding MGP_BALBcJ_T0038854.1 MGP_BALBcJ_G0021105.1 mouse_genomes_project 14 25408880 25635419 - MGP_BALBcJ_P0038854 Wdfy4 protein_coding protein_coding MGP_BALBcJ_T0038855.1 MGP_BALBcJ_G0021105.1 mouse_genomes_project 14 25408903 25635419 - MGP_BALBcJ_P0038855 Wdfy4 protein_coding protein_coding MGP_BALBcJ_T0038862.1 MGP_BALBcJ_G0021105.1 mouse_genomes_project 14 25462947 25613709 - MGP_BALBcJ_P0038862 Wdfy4 protein_coding unknown_likely_coding MGP_BALBcJ_T0038863.1 MGP_BALBcJ_G0021105.1 mouse_genomes_project 14 25467199 25472267 - MGP_BALBcJ_P0038863 Wdfy4 protein_coding protein_coding MGP_BALBcJ_T0038864.1 MGP_BALBcJ_G0021105.1 mouse_genomes_project 14 25613514 25635861 - MGP_BALBcJ_P0038864 Wdfy4 protein_coding protein_coding MGP_BALBcJ_T0039952.1 MGP_BALBcJ_G0021485.1 mouse_genomes_project 14 62569810 62600247 + MGP_BALBcJ_P0039952 protein_coding protein_coding MGP_BALBcJ_T0039954.1 MGP_BALBcJ_G0021485.1 mouse_genomes_project 14 62569826 62583200 + protein_coding retained_intron MGP_BALBcJ_T0039955.1 MGP_BALBcJ_G0021485.1 mouse_genomes_project 14 62569834 62583201 + MGP_BALBcJ_P0039955 protein_coding protein_coding MGP_BALBcJ_T0039956.1 MGP_BALBcJ_G0021485.1 mouse_genomes_project 14 62569852 62580432 + protein_coding processed_transcript MGP_BALBcJ_T0039958.1 MGP_BALBcJ_G0021485.1 mouse_genomes_project 14 62595535 62599193 + protein_coding retained_intron MGP_BALBcJ_T0039780.1 MGP_BALBcJ_G0021412.1 mouse_genomes_project 14 55687384 55725029 + Fam124a protein_coding processed_transcript MGP_BALBcJ_T0039781.1 MGP_BALBcJ_G0021412.1 mouse_genomes_project 14 55687384 55741850 + Fam124a protein_coding processed_transcript MGP_BALBcJ_T0039782.1 MGP_BALBcJ_G0021412.1 mouse_genomes_project 14 55687384 55744303 + MGP_BALBcJ_P0039782 Fam124a protein_coding protein_coding MGP_BALBcJ_T0039783.1 MGP_BALBcJ_G0021412.1 mouse_genomes_project 14 55687422 55696761 + Fam124a protein_coding processed_transcript MGP_BALBcJ_T0006663.1 MGP_BALBcJ_G0005505.1 mouse_genomes_project 14 38498200 38526661 + lincRNA lincRNA MGP_BALBcJ_T0038890.1 MGP_BALBcJ_G0021117.1 mouse_genomes_project 14 26511974 26535699 + MGP_BALBcJ_P0038890 Antxrl protein_coding protein_coding MGP_BALBcJ_T0038845.1 MGP_BALBcJ_G0021099.1 mouse_genomes_project 14 24964315 25027894 + MGP_BALBcJ_P0038845 Ercc6 protein_coding unknown_likely_coding MGP_BALBcJ_T0002569.1 MGP_BALBcJ_G0002470.1 mouse_genomes_project 14 47147089 47147143 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0038407.1 MGP_BALBcJ_G0020995.1 mouse_genomes_project 14 13255122 13260353 + MGP_BALBcJ_P0038407 Fut11 protein_coding protein_coding MGP_BALBcJ_T0039645.1 MGP_BALBcJ_G0021360.1 mouse_genomes_project 14 49867097 49895861 - MGP_BALBcJ_P0039645 Zmym5 protein_coding unknown_likely_coding MGP_BALBcJ_T0099405.1 MGP_BALBcJ_G0037441.1 mouse_genomes_project 14 41236861 41236965 + Gm23469 snRNA snRNA MGP_BALBcJ_T0040182.1 MGP_BALBcJ_G0021566.1 mouse_genomes_project 14 72767798 72792148 - MGP_BALBcJ_P0040182 Lect1 protein_coding protein_coding MGP_BALBcJ_T0040183.1 MGP_BALBcJ_G0021566.1 mouse_genomes_project 14 72767801 72792234 - MGP_BALBcJ_P0040183 Lect1 protein_coding protein_coding MGP_BALBcJ_T0040184.1 MGP_BALBcJ_G0021566.1 mouse_genomes_project 14 72767924 72772304 - Lect1 protein_coding retained_intron MGP_BALBcJ_T0040185.1 MGP_BALBcJ_G0021566.1 mouse_genomes_project 14 72771585 72775619 - Lect1 protein_coding processed_transcript MGP_BALBcJ_T0040186.1 MGP_BALBcJ_G0021566.1 mouse_genomes_project 14 72772095 72775767 - Lect1 protein_coding retained_intron MGP_BALBcJ_T0009995.1 MGP_BALBcJ_G0008120.1 mouse_genomes_project 14 101989404 101989565 + Gm24818 miRNA miRNA MGP_BALBcJ_T0039881.1 MGP_BALBcJ_G0021457.1 mouse_genomes_project 14 59314037 59330152 + MGP_BALBcJ_P0039881 Chrna2 protein_coding protein_coding MGP_BALBcJ_T0039882.1 MGP_BALBcJ_G0021457.1 mouse_genomes_project 14 59319931 59331933 + MGP_BALBcJ_P0039882 Chrna2 protein_coding protein_coding MGP_BALBcJ_T0039619.1 MGP_BALBcJ_G0021343.1 mouse_genomes_project 14 49092207 49094719 + MGP_BALBcJ_P0039619 Mcpt2 protein_coding protein_coding MGP_BALBcJ_T0038974.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37642787 37732739 - MGP_BALBcJ_P0038974 Txndc16 protein_coding protein_coding MGP_BALBcJ_T0038975.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37643238 37732770 - MGP_BALBcJ_P0038975 Txndc16 protein_coding protein_coding MGP_BALBcJ_T0038976.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37643246 37733673 - MGP_BALBcJ_P0038976 Txndc16 protein_coding protein_coding MGP_BALBcJ_T0038977.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37673346 37677851 - Txndc16 protein_coding retained_intron MGP_BALBcJ_T0038978.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37675880 37732735 - Txndc16 protein_coding retained_intron MGP_BALBcJ_T0038979.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37676749 37732727 - Txndc16 protein_coding retained_intron MGP_BALBcJ_T0038980.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37719994 37732742 - MGP_BALBcJ_P0038980 Txndc16 protein_coding protein_coding MGP_BALBcJ_T0038981.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37721273 37732747 - Txndc16 protein_coding retained_intron MGP_BALBcJ_T0038982.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37726638 37732709 - Txndc16 protein_coding processed_transcript MGP_BALBcJ_T0038983.1 MGP_BALBcJ_G0021154.1 mouse_genomes_project 14 37731232 37732735 - Txndc16 protein_coding processed_transcript MGP_BALBcJ_T0040121.1 MGP_BALBcJ_G0021539.1 mouse_genomes_project 14 68819940 68847313 - MGP_BALBcJ_P0040121 Slc25a30 protein_coding protein_coding MGP_BALBcJ_T0040013.1 MGP_BALBcJ_G0021505.1 mouse_genomes_project 14 63553227 63556368 - MGP_BALBcJ_P0040013 Sftpc protein_coding protein_coding MGP_BALBcJ_T0102237.1 MGP_BALBcJ_G0040053.1 mouse_genomes_project 14 28545324 28546765 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012949.1 MGP_BALBcJ_G0011046.1 mouse_genomes_project 14 2167379 2167980 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002533.1 MGP_BALBcJ_G0002436.1 mouse_genomes_project 14 47186276 47186336 + MGP_BALBcJ_P0002533 Traj22 TR_J_gene TR_J_gene MGP_BALBcJ_T0038617.1 MGP_BALBcJ_G0021051.1 mouse_genomes_project 14 22303937 22319050 + MGP_BALBcJ_P0038617 Actr8 protein_coding protein_coding MGP_BALBcJ_T0038995.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38122232 38197998 - MGP_BALBcJ_P0038995 Ddhd1 protein_coding protein_coding MGP_BALBcJ_T0038996.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38122543 38151327 - Ddhd1 protein_coding retained_intron MGP_BALBcJ_T0038997.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38123713 38197953 - MGP_BALBcJ_P0038997 Ddhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038998.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38123713 38197953 - MGP_BALBcJ_P0038998 Ddhd1 protein_coding protein_coding MGP_BALBcJ_T0038999.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38123784 38153245 - Ddhd1 protein_coding retained_intron MGP_BALBcJ_T0039000.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38124001 38131799 - MGP_BALBcJ_P0039000 Ddhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039001.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38124394 38150784 - MGP_BALBcJ_P0039001 Ddhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039002.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38124484 38197997 - MGP_BALBcJ_P0039002 Ddhd1 protein_coding protein_coding MGP_BALBcJ_T0039003.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38134082 38138437 - Ddhd1 protein_coding retained_intron MGP_BALBcJ_T0039004.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38150709 38197256 - Ddhd1 protein_coding processed_transcript MGP_BALBcJ_T0039005.1 MGP_BALBcJ_G0021161.1 mouse_genomes_project 14 38158404 38197273 - Ddhd1 protein_coding retained_intron MGP_BALBcJ_T0100694.1 MGP_BALBcJ_G0038730.1 mouse_genomes_project 14 55771047 55771179 - Gm23816 snoRNA snoRNA MGP_BALBcJ_T0039429.1 MGP_BALBcJ_G0021290.1 mouse_genomes_project 14 47878977 47883831 + MGP_BALBcJ_P0039429 Bcl2l2 protein_coding protein_coding MGP_BALBcJ_T0039430.1 MGP_BALBcJ_G0021290.1 mouse_genomes_project 14 47878981 47879658 + Bcl2l2 protein_coding retained_intron MGP_BALBcJ_T0039432.1 MGP_BALBcJ_G0021290.1 mouse_genomes_project 14 47879056 47881130 + MGP_BALBcJ_P0039432 Bcl2l2 protein_coding protein_coding MGP_BALBcJ_T0039433.1 MGP_BALBcJ_G0021290.1 mouse_genomes_project 14 47879107 47883692 + MGP_BALBcJ_P0039433 Bcl2l2 protein_coding protein_coding MGP_BALBcJ_T0039163.1 MGP_BALBcJ_G0021220.1 mouse_genomes_project 14 43655690 43658386 + MGP_BALBcJ_P0039163 Apex1 protein_coding protein_coding MGP_BALBcJ_T0039164.1 MGP_BALBcJ_G0021220.1 mouse_genomes_project 14 43655691 43657798 + MGP_BALBcJ_P0039164 Apex1 protein_coding protein_coding MGP_BALBcJ_T0039165.1 MGP_BALBcJ_G0021220.1 mouse_genomes_project 14 43655700 43656356 + MGP_BALBcJ_P0039165 Apex1 protein_coding protein_coding MGP_BALBcJ_T0039166.1 MGP_BALBcJ_G0021220.1 mouse_genomes_project 14 43656007 43658386 + MGP_BALBcJ_P0039166 Apex1 protein_coding protein_coding MGP_BALBcJ_T0000905.1 MGP_BALBcJ_G0000836.1 mouse_genomes_project 14 47872303 47875339 + TEC TEC MGP_BALBcJ_T0039251.1 MGP_BALBcJ_G0021248.1 mouse_genomes_project 14 44932253 44946665 - MGP_BALBcJ_P0039251 Zfp219 protein_coding protein_coding MGP_BALBcJ_T0039252.1 MGP_BALBcJ_G0021248.1 mouse_genomes_project 14 44932262 44945645 - MGP_BALBcJ_P0039252 Zfp219 protein_coding protein_coding MGP_BALBcJ_T0002510.1 MGP_BALBcJ_G0002413.1 mouse_genomes_project 14 47161103 47161166 + MGP_BALBcJ_P0002510 Traj46 TR_J_gene TR_J_gene MGP_BALBcJ_T0002611.1 MGP_BALBcJ_G0002505.1 mouse_genomes_project 14 46071874 46072424 + MGP_BALBcJ_P0002611 TR_V_gene TR_V_gene MGP_BALBcJ_T0040187.1 MGP_BALBcJ_G0021567.1 mouse_genomes_project 14 72906650 72911188 - MGP_BALBcJ_P0040187 Pcdh8 protein_coding protein_coding MGP_BALBcJ_T0040188.1 MGP_BALBcJ_G0021567.1 mouse_genomes_project 14 72906655 72911188 - MGP_BALBcJ_P0040188 Pcdh8 protein_coding protein_coding MGP_BALBcJ_T0040189.1 MGP_BALBcJ_G0021567.1 mouse_genomes_project 14 72906659 72911188 - Pcdh8 protein_coding retained_intron MGP_BALBcJ_T0040190.1 MGP_BALBcJ_G0021567.1 mouse_genomes_project 14 72908907 72911080 - Pcdh8 protein_coding processed_transcript MGP_BALBcJ_T0040317.1 MGP_BALBcJ_G0021616.1 mouse_genomes_project 14 112185550 112416802 - MGP_BALBcJ_P0040317 Abcc4 protein_coding protein_coding MGP_BALBcJ_T0040318.1 MGP_BALBcJ_G0021616.1 mouse_genomes_project 14 112185550 112416802 - MGP_BALBcJ_P0040318 Abcc4 protein_coding protein_coding MGP_BALBcJ_T0012956.1 MGP_BALBcJ_G0011053.1 mouse_genomes_project 14 11075369 11077493 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038578.1 MGP_BALBcJ_G0021035.1 mouse_genomes_project 14 18957631 18976591 + MGP_BALBcJ_P0038578 Arf4 protein_coding protein_coding MGP_BALBcJ_T0038579.1 MGP_BALBcJ_G0021035.1 mouse_genomes_project 14 18957783 18976134 + MGP_BALBcJ_P0038579 Arf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038580.1 MGP_BALBcJ_G0021035.1 mouse_genomes_project 14 18957810 18976141 + Arf4 protein_coding processed_transcript MGP_BALBcJ_T0038581.1 MGP_BALBcJ_G0021035.1 mouse_genomes_project 14 18957904 18976147 + MGP_BALBcJ_P0038581 Arf4 protein_coding protein_coding MGP_BALBcJ_T0038582.1 MGP_BALBcJ_G0021035.1 mouse_genomes_project 14 18972343 18973190 + Arf4 protein_coding retained_intron MGP_BALBcJ_T0038583.1 MGP_BALBcJ_G0021035.1 mouse_genomes_project 14 18972463 18986006 + MGP_BALBcJ_P0038583 Arf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0002619.1 MGP_BALBcJ_G0002512.1 mouse_genomes_project 14 46375286 46376955 + MGP_BALBcJ_P0002619 TR_V_gene TR_V_gene MGP_BALBcJ_T0002622.1 MGP_BALBcJ_G0002512.1 mouse_genomes_project 14 46376650 46376955 + MGP_BALBcJ_P0002622 TR_V_gene TR_V_gene MGP_BALBcJ_T0009965.1 MGP_BALBcJ_G0008090.1 mouse_genomes_project 14 47630031 47630093 - Mir6948 miRNA miRNA MGP_BALBcJ_T0038462.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14398084 14407904 + MGP_BALBcJ_P0038462 Vdac2 protein_coding protein_coding MGP_BALBcJ_T0038463.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14398316 14413819 + MGP_BALBcJ_P0038463 Vdac2 protein_coding protein_coding MGP_BALBcJ_T0038464.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14398539 14404614 + MGP_BALBcJ_P0038464 Vdac2 protein_coding protein_coding MGP_BALBcJ_T0038465.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14400423 14404808 + Vdac2 protein_coding processed_transcript MGP_BALBcJ_T0038466.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14404530 14408012 + Vdac2 protein_coding retained_intron MGP_BALBcJ_T0038467.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14404627 14405644 + Vdac2 protein_coding retained_intron MGP_BALBcJ_T0038468.1 MGP_BALBcJ_G0021008.1 mouse_genomes_project 14 14409740 14413458 + Vdac2 protein_coding retained_intron MGP_BALBcJ_T0002498.1 MGP_BALBcJ_G0002404.1 mouse_genomes_project 14 47142400 47142463 + MGP_BALBcJ_P0002498 Traj58 TR_J_gene TR_J_gene MGP_BALBcJ_T0038594.1 MGP_BALBcJ_G0021039.1 mouse_genomes_project 14 19232817 19287031 - MGP_BALBcJ_P0038594 Appl1 protein_coding protein_coding MGP_BALBcJ_T0038595.1 MGP_BALBcJ_G0021039.1 mouse_genomes_project 14 19267055 19274223 - Appl1 protein_coding retained_intron MGP_BALBcJ_T0038596.1 MGP_BALBcJ_G0021039.1 mouse_genomes_project 14 19268352 19286298 - Appl1 protein_coding retained_intron MGP_BALBcJ_T0038597.1 MGP_BALBcJ_G0021039.1 mouse_genomes_project 14 19278404 19286261 - Appl1 protein_coding retained_intron MGP_BALBcJ_T0002517.1 MGP_BALBcJ_G0002420.1 mouse_genomes_project 14 47168674 47168737 + MGP_BALBcJ_P0002517 Traj39 TR_J_gene TR_J_gene MGP_BALBcJ_T0100690.1 MGP_BALBcJ_G0038726.1 mouse_genomes_project 14 49924519 49924605 - Gm22498 snoRNA snoRNA MGP_BALBcJ_T0002626.1 MGP_BALBcJ_G0002516.1 mouse_genomes_project 14 46566372 46566902 + MGP_BALBcJ_P0002626 TR_V_gene TR_V_gene MGP_BALBcJ_T0002695.1 MGP_BALBcJ_G0002571.1 mouse_genomes_project 14 45558354 45558853 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0011350.1 MGP_BALBcJ_G0009475.1 mouse_genomes_project 14 37983718 37984001 - Gm22637 misc_RNA misc_RNA MGP_BALBcJ_T0040236.1 MGP_BALBcJ_G0021586.1 mouse_genomes_project 14 95193794 95200715 - MGP_BALBcJ_P0040236 Commd6 protein_coding protein_coding MGP_BALBcJ_T0040237.1 MGP_BALBcJ_G0021586.1 mouse_genomes_project 14 95193795 95200500 - MGP_BALBcJ_P0040237 Commd6 protein_coding protein_coding MGP_BALBcJ_T0040238.1 MGP_BALBcJ_G0021586.1 mouse_genomes_project 14 95200084 95200715 - Commd6 protein_coding retained_intron MGP_BALBcJ_T0038584.1 MGP_BALBcJ_G0021036.1 mouse_genomes_project 14 18980878 18990809 - MGP_BALBcJ_P0038584 Pde12 protein_coding protein_coding MGP_BALBcJ_T0040315.1 MGP_BALBcJ_G0021614.1 mouse_genomes_project 14 111933271 111937070 - MGP_BALBcJ_P0040315 Sox21 protein_coding protein_coding MGP_BALBcJ_T0002617.1 MGP_BALBcJ_G0002511.1 mouse_genomes_project 14 46297371 46297973 + MGP_BALBcJ_P0002617 TR_V_gene TR_V_gene MGP_BALBcJ_T0099417.1 MGP_BALBcJ_G0037453.1 mouse_genomes_project 14 49940781 49940840 - Gm22218 snRNA snRNA MGP_BALBcJ_T0039253.1 MGP_BALBcJ_G0021249.1 mouse_genomes_project 14 44942819 44945719 + MGP_BALBcJ_P0039253 Tmem253 protein_coding protein_coding MGP_BALBcJ_T0039649.1 MGP_BALBcJ_G0021364.1 mouse_genomes_project 14 50113758 50117201 + MGP_BALBcJ_P0039649 B020004C17Rik protein_coding protein_coding MGP_BALBcJ_T0002513.1 MGP_BALBcJ_G0002416.1 mouse_genomes_project 14 47163494 47163551 + MGP_BALBcJ_P0002513 Traj43 TR_J_gene TR_J_gene MGP_BALBcJ_T0039148.1 MGP_BALBcJ_G0021212.1 mouse_genomes_project 14 43460960 43462729 - MGP_BALBcJ_P0039148 protein_coding protein_coding MGP_BALBcJ_T0039123.1 MGP_BALBcJ_G0021190.1 mouse_genomes_project 14 42696219 42697677 - MGP_BALBcJ_P0039123 protein_coding protein_coding MGP_BALBcJ_T0002538.1 MGP_BALBcJ_G0002441.1 mouse_genomes_project 14 47190781 47190844 + MGP_BALBcJ_P0002538 Traj17 TR_J_gene TR_J_gene MGP_BALBcJ_T0040274.1 MGP_BALBcJ_G0021595.1 mouse_genomes_project 14 97055553 97163060 + MGP_BALBcJ_P0040274 Scel protein_coding protein_coding MGP_BALBcJ_T0040275.1 MGP_BALBcJ_G0021595.1 mouse_genomes_project 14 97071408 97162113 + MGP_BALBcJ_P0040275 Scel protein_coding unknown_likely_coding MGP_BALBcJ_T0017367.1 MGP_BALBcJ_G0015213.1 mouse_genomes_project 14 60660032 60669518 - Gm10860 processed_transcript processed_transcript MGP_BALBcJ_T0039586.1 MGP_BALBcJ_G0021323.1 mouse_genomes_project 14 48666643 48669272 - MGP_BALBcJ_P0039586 Mdp1 protein_coding protein_coding MGP_BALBcJ_T0039420.1 MGP_BALBcJ_G0021287.1 mouse_genomes_project 14 47709881 47767911 - MGP_BALBcJ_P0039420 Slc7a8 protein_coding protein_coding MGP_BALBcJ_T0038328.1 MGP_BALBcJ_G0020970.1 mouse_genomes_project 14 10557349 10601269 - MGP_BALBcJ_P0038328 Nr1d2 protein_coding protein_coding MGP_BALBcJ_T0039853.1 MGP_BALBcJ_G0021444.1 mouse_genomes_project 14 58509670 58550232 + MGP_BALBcJ_P0039853 Zfp395 protein_coding protein_coding MGP_BALBcJ_T0006645.1 MGP_BALBcJ_G0005493.1 mouse_genomes_project 14 17475821 17479828 + Gm10398 lincRNA lincRNA MGP_BALBcJ_T0039450.1 MGP_BALBcJ_G0021298.1 mouse_genomes_project 14 47966472 47991195 - MGP_BALBcJ_P0039450 Myh7 protein_coding protein_coding MGP_BALBcJ_T0039451.1 MGP_BALBcJ_G0021298.1 mouse_genomes_project 14 47966549 47991187 - MGP_BALBcJ_P0039451 Myh7 protein_coding protein_coding MGP_BALBcJ_T0039453.1 MGP_BALBcJ_G0021298.1 mouse_genomes_project 14 47976775 47983072 - Myh7 protein_coding retained_intron MGP_BALBcJ_T0039454.1 MGP_BALBcJ_G0021298.1 mouse_genomes_project 14 47989276 47991109 - MGP_BALBcJ_P0039454 Myh7 protein_coding protein_coding MGP_BALBcJ_T0006661.1 MGP_BALBcJ_G0005503.1 mouse_genomes_project 14 32154151 32180121 + 1700109I08Rik lincRNA lincRNA MGP_BALBcJ_T0000912.1 MGP_BALBcJ_G0000843.1 mouse_genomes_project 14 60153854 60155226 + TEC TEC MGP_BALBcJ_T0039646.1 MGP_BALBcJ_G0021361.1 mouse_genomes_project 14 49977981 50054184 + MGP_BALBcJ_P0039646 Zmym2 protein_coding unknown_likely_coding MGP_BALBcJ_T0002520.1 MGP_BALBcJ_G0002423.1 mouse_genomes_project 14 47172488 47172550 + MGP_BALBcJ_P0002520 Traj35 TR_J_gene TR_J_gene MGP_BALBcJ_T0039634.1 MGP_BALBcJ_G0021357.1 mouse_genomes_project 14 49651274 49735316 + MGP_BALBcJ_P0039634 Parp4 protein_coding protein_coding MGP_BALBcJ_T0039635.1 MGP_BALBcJ_G0021357.1 mouse_genomes_project 14 49730856 49735314 + Parp4 protein_coding retained_intron MGP_BALBcJ_T0038802.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505026 24511970 + MGP_BALBcJ_P0038802 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038803.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505028 24516838 + MGP_BALBcJ_P0038803 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038804.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505065 24523532 + MGP_BALBcJ_P0038804 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038805.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505439 24519925 + MGP_BALBcJ_P0038805 Oxnad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038806.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505463 24523532 + MGP_BALBcJ_P0038806 Oxnad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038807.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505478 24519794 + MGP_BALBcJ_P0038807 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038808.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505486 24520336 + Oxnad1 protein_coding retained_intron MGP_BALBcJ_T0038809.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505486 24516918 + MGP_BALBcJ_P0038809 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038810.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24505529 24516878 + MGP_BALBcJ_P0038810 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038811.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24515692 24522985 + MGP_BALBcJ_P0038811 Oxnad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038812.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24515755 24523182 + MGP_BALBcJ_P0038812 Oxnad1 protein_coding protein_coding MGP_BALBcJ_T0038813.1 MGP_BALBcJ_G0021089.1 mouse_genomes_project 14 24521111 24522612 + Oxnad1 protein_coding retained_intron MGP_BALBcJ_T0038688.1 MGP_BALBcJ_G0021068.1 mouse_genomes_project 14 23373346 23380419 - MGP_BALBcJ_P0038688 Gnl3 protein_coding protein_coding MGP_BALBcJ_T0039324.1 MGP_BALBcJ_G0021262.1 mouse_genomes_project 14 45334585 45341898 - MGP_BALBcJ_P0039324 protein_coding protein_coding MGP_BALBcJ_T0039325.1 MGP_BALBcJ_G0021262.1 mouse_genomes_project 14 45334858 45345272 - MGP_BALBcJ_P0039325 protein_coding protein_coding MGP_BALBcJ_T0100696.1 MGP_BALBcJ_G0038732.1 mouse_genomes_project 14 57916505 57916641 + Gm26225 snoRNA snoRNA MGP_BALBcJ_T0003522.1 MGP_BALBcJ_G0003204.1 mouse_genomes_project 14 38920913 38922672 + Gm15222 antisense antisense MGP_BALBcJ_T0003560.1 MGP_BALBcJ_G0003232.1 mouse_genomes_project 14 65630921 65646954 + Gm16549 antisense antisense MGP_BALBcJ_T0002571.1 MGP_BALBcJ_G0002472.1 mouse_genomes_project 14 47171113 47171178 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0038357.1 MGP_BALBcJ_G0020976.1 mouse_genomes_project 14 12297237 12360050 + MGP_BALBcJ_P0038357 Nid2 protein_coding protein_coding MGP_BALBcJ_T0098840.1 MGP_BALBcJ_G0036890.1 mouse_genomes_project 14 49809844 49811142 - C030013D06Rik sense_intronic sense_intronic MGP_BALBcJ_T0039331.1 MGP_BALBcJ_G0021264.1 mouse_genomes_project 14 45410068 45414798 - MGP_BALBcJ_P0039331 Olfr1508 protein_coding protein_coding MGP_BALBcJ_T0039332.1 MGP_BALBcJ_G0021264.1 mouse_genomes_project 14 45410422 45414832 - MGP_BALBcJ_P0039332 Olfr1508 protein_coding protein_coding MGP_BALBcJ_T0039333.1 MGP_BALBcJ_G0021264.1 mouse_genomes_project 14 45410890 45414427 - MGP_BALBcJ_P0039333 Olfr1508 protein_coding protein_coding MGP_BALBcJ_T0098507.1 MGP_BALBcJ_G0036561.1 mouse_genomes_project 14 68803793 68803885 - Gm24876 rRNA rRNA MGP_BALBcJ_T0039855.1 MGP_BALBcJ_G0021446.1 mouse_genomes_project 14 58684811 58748091 - MGP_BALBcJ_P0039855 Elp3 protein_coding protein_coding MGP_BALBcJ_T0009988.1 MGP_BALBcJ_G0008113.1 mouse_genomes_project 14 72878073 72878171 + Mir759 miRNA miRNA MGP_BALBcJ_T0040078.1 MGP_BALBcJ_G0021523.1 mouse_genomes_project 14 66534933 66548368 + MGP_BALBcJ_P0040078 Med4 protein_coding protein_coding MGP_BALBcJ_T0099441.1 MGP_BALBcJ_G0037477.1 mouse_genomes_project 14 104421564 104421667 + Gm26255 snRNA snRNA MGP_BALBcJ_T0003536.1 MGP_BALBcJ_G0003216.1 mouse_genomes_project 14 48560067 48568789 - Gm15932 antisense antisense MGP_BALBcJ_T0039425.1 MGP_BALBcJ_G0021289.1 mouse_genomes_project 14 47864965 47868547 - Ppp1r3e protein_coding processed_transcript MGP_BALBcJ_T0039426.1 MGP_BALBcJ_G0021289.1 mouse_genomes_project 14 47864977 47872843 - MGP_BALBcJ_P0039426 Ppp1r3e protein_coding protein_coding MGP_BALBcJ_T0039427.1 MGP_BALBcJ_G0021289.1 mouse_genomes_project 14 47870887 47871914 - Ppp1r3e protein_coding TEC MGP_BALBcJ_T0039428.1 MGP_BALBcJ_G0021289.1 mouse_genomes_project 14 47870887 47872831 - MGP_BALBcJ_P0039428 Ppp1r3e protein_coding protein_coding MGP_BALBcJ_T0040167.1 MGP_BALBcJ_G0021558.1 mouse_genomes_project 14 72324002 72359827 - MGP_BALBcJ_P0040167 Zfp957 protein_coding protein_coding MGP_BALBcJ_T0040168.1 MGP_BALBcJ_G0021558.1 mouse_genomes_project 14 72324004 72336436 - MGP_BALBcJ_P0040168 Zfp957 protein_coding protein_coding MGP_BALBcJ_T0040169.1 MGP_BALBcJ_G0021558.1 mouse_genomes_project 14 72335489 72359900 - Zfp957 protein_coding retained_intron MGP_BALBcJ_T0039767.1 MGP_BALBcJ_G0021405.1 mouse_genomes_project 14 54487415 54563058 - MGP_BALBcJ_P0039767 Kpna3 protein_coding protein_coding MGP_BALBcJ_T0038950.1 MGP_BALBcJ_G0021142.1 mouse_genomes_project 14 30835530 31965474 - MGP_BALBcJ_P0038950 Nrg3 protein_coding protein_coding MGP_BALBcJ_T0038951.1 MGP_BALBcJ_G0021142.1 mouse_genomes_project 14 30837055 31965210 - MGP_BALBcJ_P0038951 Nrg3 protein_coding protein_coding MGP_BALBcJ_T0038952.1 MGP_BALBcJ_G0021142.1 mouse_genomes_project 14 30837071 31965212 - MGP_BALBcJ_P0038952 Nrg3 protein_coding protein_coding MGP_BALBcJ_T0038953.1 MGP_BALBcJ_G0021142.1 mouse_genomes_project 14 31494723 31965051 - Nrg3 protein_coding retained_intron MGP_BALBcJ_T0039851.1 MGP_BALBcJ_G0021443.1 mouse_genomes_project 14 58422560 58470756 + MGP_BALBcJ_P0039851 Fbxo16 protein_coding protein_coding MGP_BALBcJ_T0039852.1 MGP_BALBcJ_G0021443.1 mouse_genomes_project 14 58426596 58470762 + MGP_BALBcJ_P0039852 Fbxo16 protein_coding unknown_likely_coding MGP_BALBcJ_T0017365.1 MGP_BALBcJ_G0015211.1 mouse_genomes_project 14 60553308 60564443 - 1700120O09Rik processed_transcript processed_transcript MGP_BALBcJ_T0040006.1 MGP_BALBcJ_G0021501.1 mouse_genomes_project 14 63403665 63460128 - MGP_BALBcJ_P0040006 Piwil2 protein_coding protein_coding MGP_BALBcJ_T0039081.1 MGP_BALBcJ_G0021177.1 mouse_genomes_project 14 40696434 40838121 + MGP_BALBcJ_P0039081 Peli2 protein_coding protein_coding MGP_BALBcJ_T0040314.1 MGP_BALBcJ_G0021613.1 mouse_genomes_project 14 111839863 111865622 + MGP_BALBcJ_P0040314 Gpr180 protein_coding protein_coding MGP_BALBcJ_T0039442.1 MGP_BALBcJ_G0021294.1 mouse_genomes_project 14 47911934 47921888 - MGP_BALBcJ_P0039442 Efs protein_coding protein_coding MGP_BALBcJ_T0003523.1 MGP_BALBcJ_G0003205.1 mouse_genomes_project 14 39638419 39657369 - Gm10371 antisense antisense MGP_BALBcJ_T0100673.1 MGP_BALBcJ_G0038709.1 mouse_genomes_project 14 12765214 12765331 - Gm24912 snoRNA snoRNA MGP_BALBcJ_T0002608.1 MGP_BALBcJ_G0002502.1 mouse_genomes_project 14 45952137 45952681 + MGP_BALBcJ_P0002608 TR_V_gene TR_V_gene MGP_BALBcJ_T0003571.1 MGP_BALBcJ_G0003240.1 mouse_genomes_project 14 117766286 117767690 + Gm28932 antisense antisense MGP_BALBcJ_T0039082.1 MGP_BALBcJ_G0021178.1 mouse_genomes_project 14 41026117 41093569 + MGP_BALBcJ_P0039082 Tmem260 protein_coding protein_coding MGP_BALBcJ_T0039083.1 MGP_BALBcJ_G0021178.1 mouse_genomes_project 14 41026341 41081611 + Tmem260 protein_coding retained_intron MGP_BALBcJ_T0039084.1 MGP_BALBcJ_G0021178.1 mouse_genomes_project 14 41026371 41095912 + MGP_BALBcJ_P0039084 Tmem260 protein_coding protein_coding MGP_BALBcJ_T0039085.1 MGP_BALBcJ_G0021178.1 mouse_genomes_project 14 41026382 41092914 + MGP_BALBcJ_P0039085 Tmem260 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039086.1 MGP_BALBcJ_G0021178.1 mouse_genomes_project 14 41026387 41089157 + Tmem260 protein_coding retained_intron MGP_BALBcJ_T0002535.1 MGP_BALBcJ_G0002438.1 mouse_genomes_project 14 47188470 47188528 + MGP_BALBcJ_P0002535 Traj20 TR_J_gene TR_J_gene MGP_BALBcJ_T0038542.1 MGP_BALBcJ_G0021027.1 mouse_genomes_project 14 18515564 18528893 + Cphx1 protein_coding processed_transcript MGP_BALBcJ_T0038544.1 MGP_BALBcJ_G0021027.1 mouse_genomes_project 14 18516281 18530296 + MGP_BALBcJ_P0038544 Cphx1 protein_coding protein_coding MGP_BALBcJ_T0039389.1 MGP_BALBcJ_G0021281.1 mouse_genomes_project 14 47618296 47626563 - MGP_BALBcJ_P0039389 Cdh24 protein_coding unknown_likely_coding MGP_BALBcJ_T0039127.1 MGP_BALBcJ_G0021194.1 mouse_genomes_project 14 42861000 42861957 - MGP_BALBcJ_P0039127 protein_coding protein_coding MGP_BALBcJ_T0038888.1 MGP_BALBcJ_G0021115.1 mouse_genomes_project 14 26499578 26505482 + MGP_BALBcJ_P0038888 Gm5460 protein_coding protein_coding MGP_BALBcJ_T0038893.1 MGP_BALBcJ_G0021119.1 mouse_genomes_project 14 26603755 26612253 - MGP_BALBcJ_P0038893 Npy4r protein_coding protein_coding MGP_BALBcJ_T0038886.1 MGP_BALBcJ_G0021113.1 mouse_genomes_project 14 26415503 26425646 + MGP_BALBcJ_P0038886 Rbp3 protein_coding protein_coding MGP_BALBcJ_T0039773.1 MGP_BALBcJ_G0021410.1 mouse_genomes_project 14 55416124 55477669 + MGP_BALBcJ_P0039773 protein_coding protein_coding MGP_BALBcJ_T0039774.1 MGP_BALBcJ_G0021410.1 mouse_genomes_project 14 55456281 55502337 + MGP_BALBcJ_P0039774 protein_coding unknown_likely_coding MGP_BALBcJ_T0039775.1 MGP_BALBcJ_G0021410.1 mouse_genomes_project 14 55456290 55488377 + MGP_BALBcJ_P0039775 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039776.1 MGP_BALBcJ_G0021410.1 mouse_genomes_project 14 55471332 55479438 + protein_coding retained_intron MGP_BALBcJ_T0039771.1 MGP_BALBcJ_G0021408.1 mouse_genomes_project 14 54730170 54734669 + MGP_BALBcJ_P0039771 Kcnrg protein_coding protein_coding MGP_BALBcJ_T0039617.1 MGP_BALBcJ_G0021341.1 mouse_genomes_project 14 48965089 48967998 - MGP_BALBcJ_P0039617 Cma1 protein_coding protein_coding MGP_BALBcJ_T0100683.1 MGP_BALBcJ_G0038719.1 mouse_genomes_project 14 29688456 29688589 + Gm22469 snoRNA snoRNA MGP_BALBcJ_T0039827.1 MGP_BALBcJ_G0021434.1 mouse_genomes_project 14 57247358 57257339 - MGP_BALBcJ_P0039827 Prss55 protein_coding protein_coding MGP_BALBcJ_T0039828.1 MGP_BALBcJ_G0021434.1 mouse_genomes_project 14 57247365 57257296 - MGP_BALBcJ_P0039828 Prss55 protein_coding protein_coding MGP_BALBcJ_T0039829.1 MGP_BALBcJ_G0021434.1 mouse_genomes_project 14 57251274 57262032 - Prss55 protein_coding processed_transcript MGP_BALBcJ_T0099442.1 MGP_BALBcJ_G0037478.1 mouse_genomes_project 14 105677506 105677598 - Gm22764 snRNA snRNA MGP_BALBcJ_T0039921.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60914041 60953936 - MGP_BALBcJ_P0039921 Cdca2 protein_coding protein_coding MGP_BALBcJ_T0039922.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60914065 60953705 - MGP_BALBcJ_P0039922 Cdca2 protein_coding protein_coding MGP_BALBcJ_T0039923.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60915506 60934764 - MGP_BALBcJ_P0039923 Cdca2 protein_coding protein_coding MGP_BALBcJ_T0039924.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60918013 60953705 - MGP_BALBcJ_P0039924 Cdca2 protein_coding protein_coding MGP_BALBcJ_T0039925.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60932157 60936011 - MGP_BALBcJ_P0039925 Cdca2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039926.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60936965 60953470 - Cdca2 protein_coding retained_intron MGP_BALBcJ_T0039927.1 MGP_BALBcJ_G0021469.1 mouse_genomes_project 14 60938301 60953776 - MGP_BALBcJ_P0039927 Cdca2 protein_coding protein_coding MGP_BALBcJ_T0013006.1 MGP_BALBcJ_G0011103.1 mouse_genomes_project 14 89743522 89744285 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011354.1 MGP_BALBcJ_G0009479.1 mouse_genomes_project 14 54766688 54766773 + Gm27747 misc_RNA misc_RNA MGP_BALBcJ_T0011349.1 MGP_BALBcJ_G0009474.1 mouse_genomes_project 14 32813789 32813968 - Gm22726 misc_RNA misc_RNA MGP_BALBcJ_T0039817.1 MGP_BALBcJ_G0021428.1 mouse_genomes_project 14 56692046 56712247 - MGP_BALBcJ_P0039817 Mtmr9 protein_coding protein_coding MGP_BALBcJ_T0039789.1 MGP_BALBcJ_G0021417.1 mouse_genomes_project 14 56143856 56146810 + MGP_BALBcJ_P0039789 Defb47 protein_coding protein_coding MGP_BALBcJ_T0002568.1 MGP_BALBcJ_G0002469.1 mouse_genomes_project 14 47146538 47146601 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0002596.1 MGP_BALBcJ_G0002492.1 mouse_genomes_project 14 45623098 45623607 + MGP_BALBcJ_P0002596 TR_V_gene TR_V_gene MGP_BALBcJ_T0038370.1 MGP_BALBcJ_G0020984.1 mouse_genomes_project 14 12907055 12927461 + MGP_BALBcJ_P0038370 Fam149b protein_coding protein_coding MGP_BALBcJ_T0038371.1 MGP_BALBcJ_G0020984.1 mouse_genomes_project 14 12907055 12942337 + MGP_BALBcJ_P0038371 Fam149b protein_coding protein_coding MGP_BALBcJ_T0038372.1 MGP_BALBcJ_G0020984.1 mouse_genomes_project 14 12907055 12942337 + MGP_BALBcJ_P0038372 Fam149b protein_coding protein_coding MGP_BALBcJ_T0038373.1 MGP_BALBcJ_G0020984.1 mouse_genomes_project 14 12907115 12942337 + MGP_BALBcJ_P0038373 Fam149b protein_coding protein_coding MGP_BALBcJ_T0038770.1 MGP_BALBcJ_G0021083.1 mouse_genomes_project 14 23911377 23967294 - MGP_BALBcJ_P0038770 Colq protein_coding protein_coding MGP_BALBcJ_T0038771.1 MGP_BALBcJ_G0021083.1 mouse_genomes_project 14 23911455 23946940 - MGP_BALBcJ_P0038771 Colq protein_coding protein_coding MGP_BALBcJ_T0038773.1 MGP_BALBcJ_G0021083.1 mouse_genomes_project 14 23941565 23982169 - MGP_BALBcJ_P0038773 Colq protein_coding protein_coding MGP_BALBcJ_T0038774.1 MGP_BALBcJ_G0021083.1 mouse_genomes_project 14 23968380 23982145 - Colq protein_coding processed_transcript MGP_BALBcJ_T0038775.1 MGP_BALBcJ_G0021083.1 mouse_genomes_project 14 23977598 23982134 - Colq protein_coding processed_transcript MGP_BALBcJ_T0040302.1 MGP_BALBcJ_G0021607.1 mouse_genomes_project 14 104438492 104445014 - MGP_BALBcJ_P0040302 Slitrk6 protein_coding protein_coding MGP_BALBcJ_T0002511.1 MGP_BALBcJ_G0002414.1 mouse_genomes_project 14 47161602 47161665 + MGP_BALBcJ_P0002511 Traj45 TR_J_gene TR_J_gene MGP_BALBcJ_T0009986.1 MGP_BALBcJ_G0008111.1 mouse_genomes_project 14 71285470 71285576 - Mir1971 miRNA miRNA MGP_BALBcJ_T0099424.1 MGP_BALBcJ_G0037460.1 mouse_genomes_project 14 75555268 75555432 - Gm22891 snRNA snRNA MGP_BALBcJ_T0039032.1 MGP_BALBcJ_G0021169.1 mouse_genomes_project 14 39693448 39729721 - MGP_BALBcJ_P0039032 Gch1 protein_coding protein_coding MGP_BALBcJ_T0017331.1 MGP_BALBcJ_G0015201.1 mouse_genomes_project 14 37581 84638 - Gm10044 processed_transcript antisense MGP_BALBcJ_T0017333.1 MGP_BALBcJ_G0015201.1 mouse_genomes_project 14 49840 84562 - Gm10044 processed_transcript antisense MGP_BALBcJ_T0017334.1 MGP_BALBcJ_G0015201.1 mouse_genomes_project 14 58257 67402 - Gm10044 processed_transcript antisense MGP_BALBcJ_T0017335.1 MGP_BALBcJ_G0015201.1 mouse_genomes_project 14 64289 67472 - Gm10044 processed_transcript retained_intron MGP_BALBcJ_T0017336.1 MGP_BALBcJ_G0015201.1 mouse_genomes_project 14 64522 84540 - Gm10044 processed_transcript antisense MGP_BALBcJ_T0039868.1 MGP_BALBcJ_G0021452.1 mouse_genomes_project 14 59084904 59119640 - MGP_BALBcJ_P0039868 Scara3 protein_coding protein_coding MGP_BALBcJ_T0039909.1 MGP_BALBcJ_G0021465.1 mouse_genomes_project 14 60126707 60136054 + MGP_BALBcJ_P0039909 Pnma2 protein_coding protein_coding MGP_BALBcJ_T0039910.1 MGP_BALBcJ_G0021465.1 mouse_genomes_project 14 60126745 60134819 + MGP_BALBcJ_P0039910 Pnma2 protein_coding protein_coding MGP_BALBcJ_T0039911.1 MGP_BALBcJ_G0021465.1 mouse_genomes_project 14 60126779 60130726 + Pnma2 protein_coding processed_transcript MGP_BALBcJ_T0039912.1 MGP_BALBcJ_G0021465.1 mouse_genomes_project 14 60130315 60132034 + Pnma2 protein_coding processed_transcript MGP_BALBcJ_T0100726.1 MGP_BALBcJ_G0038762.1 mouse_genomes_project 14 112485339 112485470 + Gm22379 snoRNA snoRNA MGP_BALBcJ_T0099416.1 MGP_BALBcJ_G0037452.1 mouse_genomes_project 14 49940709 49940768 - Gm27635 snRNA snRNA MGP_BALBcJ_T0102239.1 MGP_BALBcJ_G0040055.1 mouse_genomes_project 14 43840278 43840713 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102247.1 MGP_BALBcJ_G0040063.1 mouse_genomes_project 14 118403126 118403411 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0038906.1 MGP_BALBcJ_G0021125.1 mouse_genomes_project 14 26836073 26840589 - MGP_BALBcJ_P0038906 Sncg protein_coding protein_coding MGP_BALBcJ_T0013009.1 MGP_BALBcJ_G0011106.1 mouse_genomes_project 14 92554632 92554953 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039653.1 MGP_BALBcJ_G0021368.1 mouse_genomes_project 14 50223221 50233524 - MGP_BALBcJ_P0039653 Gjb6 protein_coding protein_coding MGP_BALBcJ_T0039654.1 MGP_BALBcJ_G0021368.1 mouse_genomes_project 14 50224200 50233194 - MGP_BALBcJ_P0039654 Gjb6 protein_coding protein_coding MGP_BALBcJ_T0039655.1 MGP_BALBcJ_G0021368.1 mouse_genomes_project 14 50230755 50231977 - Gjb6 protein_coding processed_transcript MGP_BALBcJ_T0039390.1 MGP_BALBcJ_G0021282.1 mouse_genomes_project 14 47619403 47619854 + MGP_BALBcJ_P0039390 Gm20726 protein_coding protein_coding MGP_BALBcJ_T0040325.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112698464 112720562 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0040326.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112698464 112823098 - MGP_BALBcJ_P0040326 Uggt2 protein_coding protein_coding MGP_BALBcJ_T0040327.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112699617 112720322 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0040328.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112699842 112719843 - Uggt2 protein_coding processed_transcript MGP_BALBcJ_T0040329.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112700239 112720496 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0040330.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112711613 112722160 - Uggt2 protein_coding processed_transcript MGP_BALBcJ_T0040331.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112715274 112721268 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0040332.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112715440 112720655 - Uggt2 protein_coding processed_transcript MGP_BALBcJ_T0040333.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112716390 112731833 - MGP_BALBcJ_P0040333 Uggt2 protein_coding protein_coding MGP_BALBcJ_T0040334.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112727507 112771845 - MGP_BALBcJ_P0040334 Uggt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040335.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112727507 112745981 - MGP_BALBcJ_P0040335 Uggt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040336.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112746108 112749690 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0040337.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112757880 112763321 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0040338.1 MGP_BALBcJ_G0021620.1 mouse_genomes_project 14 112773077 112823098 - Uggt2 protein_coding retained_intron MGP_BALBcJ_T0100688.1 MGP_BALBcJ_G0038724.1 mouse_genomes_project 14 48159063 48159195 - Gm23596 snoRNA snoRNA MGP_BALBcJ_T0039938.1 MGP_BALBcJ_G0021475.1 mouse_genomes_project 14 61733814 61774049 - MGP_BALBcJ_P0039938 Adam7 protein_coding protein_coding MGP_BALBcJ_T0039939.1 MGP_BALBcJ_G0021475.1 mouse_genomes_project 14 61734306 61746415 - Adam7 protein_coding retained_intron MGP_BALBcJ_T0039803.1 MGP_BALBcJ_G0021424.1 mouse_genomes_project 14 56349699 56400845 - MGP_BALBcJ_P0039803 Gata4 protein_coding protein_coding MGP_BALBcJ_T0039804.1 MGP_BALBcJ_G0021424.1 mouse_genomes_project 14 56351152 56396722 - MGP_BALBcJ_P0039804 Gata4 protein_coding protein_coding MGP_BALBcJ_T0039805.1 MGP_BALBcJ_G0021424.1 mouse_genomes_project 14 56396675 56433538 - MGP_BALBcJ_P0039805 Gata4 protein_coding protein_coding MGP_BALBcJ_T0039806.1 MGP_BALBcJ_G0021424.1 mouse_genomes_project 14 56396688 56432968 - MGP_BALBcJ_P0039806 Gata4 protein_coding protein_coding MGP_BALBcJ_T0039807.1 MGP_BALBcJ_G0021424.1 mouse_genomes_project 14 56396688 56432968 - MGP_BALBcJ_P0039807 Gata4 protein_coding protein_coding MGP_BALBcJ_T0006686.1 MGP_BALBcJ_G0005521.1 mouse_genomes_project 14 51120333 51124703 + 3110083C13Rik lincRNA lincRNA MGP_BALBcJ_T0040284.1 MGP_BALBcJ_G0021599.1 mouse_genomes_project 14 98032871 98078484 - MGP_BALBcJ_P0040284 Rnf219 protein_coding protein_coding MGP_BALBcJ_T0100708.1 MGP_BALBcJ_G0038744.1 mouse_genomes_project 14 84552627 84552741 - Gm23225 snoRNA snoRNA MGP_BALBcJ_T0002607.1 MGP_BALBcJ_G0002501.1 mouse_genomes_project 14 45952136 45952681 + MGP_BALBcJ_P0002607 TR_V_gene TR_V_gene MGP_BALBcJ_T0039152.1 MGP_BALBcJ_G0021216.1 mouse_genomes_project 14 43551911 43600893 - MGP_BALBcJ_P0039152 Tep1 protein_coding protein_coding MGP_BALBcJ_T0099423.1 MGP_BALBcJ_G0037459.1 mouse_genomes_project 14 68706705 68706812 - Gm23622 snRNA snRNA MGP_BALBcJ_T0040119.1 MGP_BALBcJ_G0021537.1 mouse_genomes_project 14 68697550 68723643 + MGP_BALBcJ_P0040119 Erich6b protein_coding protein_coding MGP_BALBcJ_T0039391.1 MGP_BALBcJ_G0021283.1 mouse_genomes_project 14 47627933 47635237 + MGP_BALBcJ_P0039391 Gm17606 protein_coding protein_coding MGP_BALBcJ_T0002504.1 MGP_BALBcJ_G0002409.1 mouse_genomes_project 14 47156362 47156425 + MGP_BALBcJ_P0002504 Traj50 TR_J_gene TR_J_gene MGP_BALBcJ_T0039713.1 MGP_BALBcJ_G0021384.1 mouse_genomes_project 14 52346519 52374563 - MGP_BALBcJ_P0039713 Gm6904 protein_coding protein_coding MGP_BALBcJ_T0039361.1 MGP_BALBcJ_G0021271.1 mouse_genomes_project 14 47407326 47408182 + Mrpl52 protein_coding retained_intron MGP_BALBcJ_T0039362.1 MGP_BALBcJ_G0021271.1 mouse_genomes_project 14 47407327 47407842 + Mrpl52 protein_coding retained_intron MGP_BALBcJ_T0039363.1 MGP_BALBcJ_G0021271.1 mouse_genomes_project 14 47407337 47410134 + MGP_BALBcJ_P0039363 Mrpl52 protein_coding protein_coding MGP_BALBcJ_T0039364.1 MGP_BALBcJ_G0021271.1 mouse_genomes_project 14 47407444 47410152 + Mrpl52 protein_coding retained_intron MGP_BALBcJ_T0039365.1 MGP_BALBcJ_G0021271.1 mouse_genomes_project 14 47407455 47410155 + MGP_BALBcJ_P0039365 Mrpl52 protein_coding protein_coding MGP_BALBcJ_T0012995.1 MGP_BALBcJ_G0011092.1 mouse_genomes_project 14 56591490 56592488 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009990.1 MGP_BALBcJ_G0008115.1 mouse_genomes_project 14 94259605 94259722 + Gm22401 miRNA miRNA MGP_BALBcJ_T0002528.1 MGP_BALBcJ_G0002431.1 mouse_genomes_project 14 47180886 47180945 + MGP_BALBcJ_P0002528 Traj27 TR_J_gene TR_J_gene MGP_BALBcJ_T0038760.1 MGP_BALBcJ_G0021078.1 mouse_genomes_project 14 23639029 23703233 - MGP_BALBcJ_P0038760 Dnah1 protein_coding protein_coding MGP_BALBcJ_T0009983.1 MGP_BALBcJ_G0008108.1 mouse_genomes_project 14 63474987 63475069 + Mir320 miRNA miRNA MGP_BALBcJ_T0100676.1 MGP_BALBcJ_G0038712.1 mouse_genomes_project 14 23375616 23375696 - Snord69 snoRNA snoRNA MGP_BALBcJ_T0038329.1 MGP_BALBcJ_G0020971.1 mouse_genomes_project 14 10626330 10629468 - MGP_BALBcJ_P0038329 Rpl15 protein_coding protein_coding MGP_BALBcJ_T0038330.1 MGP_BALBcJ_G0020971.1 mouse_genomes_project 14 10627448 10629430 - MGP_BALBcJ_P0038330 Rpl15 protein_coding protein_coding MGP_BALBcJ_T0038331.1 MGP_BALBcJ_G0020971.1 mouse_genomes_project 14 10627462 10629371 - MGP_BALBcJ_P0038331 Rpl15 protein_coding protein_coding MGP_BALBcJ_T0039303.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45224813 45235150 - MGP_BALBcJ_P0039303 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039304.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45224986 45235195 - MGP_BALBcJ_P0039304 Mettl3 protein_coding protein_coding MGP_BALBcJ_T0039305.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45224994 45230482 - MGP_BALBcJ_P0039305 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039306.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45225002 45226807 - Mettl3 protein_coding retained_intron MGP_BALBcJ_T0039307.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45225002 45226890 - MGP_BALBcJ_P0039307 Mettl3 protein_coding protein_coding MGP_BALBcJ_T0039308.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45225002 45226889 - MGP_BALBcJ_P0039308 Mettl3 protein_coding protein_coding MGP_BALBcJ_T0039309.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45225648 45235191 - MGP_BALBcJ_P0039309 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039310.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45225848 45226900 - Mettl3 protein_coding retained_intron MGP_BALBcJ_T0039311.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45226798 45228595 - Mettl3 protein_coding retained_intron MGP_BALBcJ_T0039312.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45227128 45229910 - Mettl3 protein_coding retained_intron MGP_BALBcJ_T0039313.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45227343 45235153 - MGP_BALBcJ_P0039313 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039314.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45227608 45235054 - MGP_BALBcJ_P0039314 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039315.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45228163 45235054 - MGP_BALBcJ_P0039315 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039316.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45228173 45235174 - MGP_BALBcJ_P0039316 Mettl3 protein_coding protein_coding MGP_BALBcJ_T0039317.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45230489 45235166 - MGP_BALBcJ_P0039317 Mettl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039318.1 MGP_BALBcJ_G0021257.1 mouse_genomes_project 14 45233687 45235191 - Mettl3 protein_coding retained_intron MGP_BALBcJ_T0040381.1 MGP_BALBcJ_G0021641.1 mouse_genomes_project 14 116607280 116702867 - MGP_BALBcJ_P0040381 Ggact protein_coding protein_coding MGP_BALBcJ_T0040384.1 MGP_BALBcJ_G0021641.1 mouse_genomes_project 14 116680414 116702909 - MGP_BALBcJ_P0040384 Ggact protein_coding protein_coding MGP_BALBcJ_T0040385.1 MGP_BALBcJ_G0021641.1 mouse_genomes_project 14 116680425 116681256 - MGP_BALBcJ_P0040385 Ggact protein_coding protein_coding MGP_BALBcJ_T0040386.1 MGP_BALBcJ_G0021641.1 mouse_genomes_project 14 116680985 116703504 - MGP_BALBcJ_P0040386 Ggact protein_coding protein_coding MGP_BALBcJ_T0040387.1 MGP_BALBcJ_G0021641.1 mouse_genomes_project 14 116681034 116702832 - MGP_BALBcJ_P0040387 Ggact protein_coding protein_coding MGP_BALBcJ_T0038303.1 MGP_BALBcJ_G0020963.1 mouse_genomes_project 14 7216511 7409867 + MGP_BALBcJ_P0038303 Nek10 protein_coding protein_coding MGP_BALBcJ_T0038304.1 MGP_BALBcJ_G0020963.1 mouse_genomes_project 14 7216561 7413747 + MGP_BALBcJ_P0038304 Nek10 protein_coding unknown_likely_coding MGP_BALBcJ_T0038305.1 MGP_BALBcJ_G0020963.1 mouse_genomes_project 14 7216561 7413747 + MGP_BALBcJ_P0038305 Nek10 protein_coding protein_coding MGP_BALBcJ_T0038306.1 MGP_BALBcJ_G0020963.1 mouse_genomes_project 14 7256647 7378668 + Nek10 protein_coding processed_transcript MGP_BALBcJ_T0038307.1 MGP_BALBcJ_G0020963.1 mouse_genomes_project 14 7260936 7380425 + Nek10 protein_coding retained_intron MGP_BALBcJ_T0038308.1 MGP_BALBcJ_G0020963.1 mouse_genomes_project 14 7338101 7413797 + MGP_BALBcJ_P0038308 Nek10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039277.1 MGP_BALBcJ_G0021253.1 mouse_genomes_project 14 45086789 45122997 - MGP_BALBcJ_P0039277 Supt16 protein_coding protein_coding MGP_BALBcJ_T0100719.1 MGP_BALBcJ_G0038755.1 mouse_genomes_project 14 98188349 98188466 - Gm25724 snoRNA snoRNA MGP_BALBcJ_T0002638.1 MGP_BALBcJ_G0002526.1 mouse_genomes_project 14 46873700 46874471 + MGP_BALBcJ_P0002638 Trav21-dv12 TR_V_gene TR_V_gene MGP_BALBcJ_T0102238.1 MGP_BALBcJ_G0040054.1 mouse_genomes_project 14 43112132 43112415 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0039970.1 MGP_BALBcJ_G0021489.1 mouse_genomes_project 14 62732558 62748673 - MGP_BALBcJ_P0039970 Chmp7 protein_coding protein_coding MGP_BALBcJ_T0013004.1 MGP_BALBcJ_G0011101.1 mouse_genomes_project 14 73469308 73470061 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013003.1 MGP_BALBcJ_G0011100.1 mouse_genomes_project 14 67774694 67788443 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039627.1 MGP_BALBcJ_G0021351.1 mouse_genomes_project 14 49284273 49290330 - MGP_BALBcJ_P0039627 Gzmf protein_coding protein_coding MGP_BALBcJ_T0099436.1 MGP_BALBcJ_G0037472.1 mouse_genomes_project 14 98152203 98152310 + Gm22021 snRNA snRNA MGP_BALBcJ_T0039684.1 MGP_BALBcJ_G0021375.1 mouse_genomes_project 14 50910796 50919118 + MGP_BALBcJ_P0039684 Sap18 protein_coding protein_coding MGP_BALBcJ_T0039685.1 MGP_BALBcJ_G0021375.1 mouse_genomes_project 14 50910834 50919107 + MGP_BALBcJ_P0039685 Sap18 protein_coding protein_coding MGP_BALBcJ_T0039686.1 MGP_BALBcJ_G0021375.1 mouse_genomes_project 14 50910880 50911466 + Sap18 protein_coding retained_intron MGP_BALBcJ_T0039687.1 MGP_BALBcJ_G0021375.1 mouse_genomes_project 14 50910899 50914695 + MGP_BALBcJ_P0039687 Sap18 protein_coding protein_coding MGP_BALBcJ_T0013011.1 MGP_BALBcJ_G0011108.1 mouse_genomes_project 14 92962118 92962459 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000918.1 MGP_BALBcJ_G0000849.1 mouse_genomes_project 14 80478652 80479029 - TEC TEC MGP_BALBcJ_T0038626.1 MGP_BALBcJ_G0021054.1 mouse_genomes_project 14 22365910 22831764 - MGP_BALBcJ_P0038626 Cacna1d protein_coding protein_coding MGP_BALBcJ_T0038627.1 MGP_BALBcJ_G0021054.1 mouse_genomes_project 14 22365910 22691099 - MGP_BALBcJ_P0038627 Cacna1d protein_coding protein_coding MGP_BALBcJ_T0038628.1 MGP_BALBcJ_G0021054.1 mouse_genomes_project 14 22393725 22549535 - MGP_BALBcJ_P0038628 Cacna1d protein_coding unknown_likely_coding MGP_BALBcJ_T0038930.1 MGP_BALBcJ_G0021134.1 mouse_genomes_project 14 28550865 28552806 + MGP_BALBcJ_P0038930 4930474N05Rik protein_coding protein_coding MGP_BALBcJ_T0038931.1 MGP_BALBcJ_G0021134.1 mouse_genomes_project 14 28550915 28556063 + MGP_BALBcJ_P0038931 4930474N05Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013000.1 MGP_BALBcJ_G0011097.1 mouse_genomes_project 14 67774692 67788439 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040157.1 MGP_BALBcJ_G0021552.1 mouse_genomes_project 14 70992942 71091622 + MGP_BALBcJ_P0040157 Epsti1 protein_coding protein_coding MGP_BALBcJ_T0040158.1 MGP_BALBcJ_G0021552.1 mouse_genomes_project 14 70993110 71052961 + MGP_BALBcJ_P0040158 Epsti1 protein_coding protein_coding MGP_BALBcJ_T0000903.1 MGP_BALBcJ_G0000834.1 mouse_genomes_project 14 45183495 45189338 + TEC TEC MGP_BALBcJ_T0039590.1 MGP_BALBcJ_G0021326.1 mouse_genomes_project 14 48689969 48692704 - MGP_BALBcJ_P0039590 Tinf2 protein_coding protein_coding MGP_BALBcJ_T0039809.1 MGP_BALBcJ_G0021426.1 mouse_genomes_project 14 56599175 56627713 + MGP_BALBcJ_P0039809 Fam167a protein_coding protein_coding MGP_BALBcJ_T0039810.1 MGP_BALBcJ_G0021426.1 mouse_genomes_project 14 56599190 56604542 + Fam167a protein_coding retained_intron MGP_BALBcJ_T0038290.1 MGP_BALBcJ_G0020956.1 mouse_genomes_project 14 6392851 6489266 + MGP_BALBcJ_P0038290 Atxn7 protein_coding protein_coding MGP_BALBcJ_T0100714.1 MGP_BALBcJ_G0038750.1 mouse_genomes_project 14 91798131 91798212 - Gm26006 snoRNA snoRNA MGP_BALBcJ_T0038276.1 MGP_BALBcJ_G0020950.1 mouse_genomes_project 14 4653604 4657752 - MGP_BALBcJ_P0038276 Fezf2 protein_coding protein_coding MGP_BALBcJ_T0000911.1 MGP_BALBcJ_G0000842.1 mouse_genomes_project 14 58000971 58004376 - TEC TEC MGP_BALBcJ_T0003541.1 MGP_BALBcJ_G0003219.1 mouse_genomes_project 14 50617596 50621688 - Ift88os antisense antisense MGP_BALBcJ_T0000915.1 MGP_BALBcJ_G0000846.1 mouse_genomes_project 14 62516986 62518483 + TEC TEC MGP_BALBcJ_T0038882.1 MGP_BALBcJ_G0021109.1 mouse_genomes_project 14 25944016 26023027 + MGP_BALBcJ_P0038882 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0040367.1 MGP_BALBcJ_G0021638.1 mouse_genomes_project 14 116263283 116267703 + MGP_BALBcJ_P0040367 Zic2 protein_coding protein_coding MGP_BALBcJ_T0040368.1 MGP_BALBcJ_G0021638.1 mouse_genomes_project 14 116265950 116266901 + Zic2 protein_coding retained_intron MGP_BALBcJ_T0003509.1 MGP_BALBcJ_G0003191.1 mouse_genomes_project 14 18030662 18036053 - Zmiz1os1 antisense antisense MGP_BALBcJ_T0000902.1 MGP_BALBcJ_G0000833.1 mouse_genomes_project 14 43685696 43687145 - TEC TEC MGP_BALBcJ_T0039928.1 MGP_BALBcJ_G0021470.1 mouse_genomes_project 14 60954031 60977754 + MGP_BALBcJ_P0039928 Kctd9 protein_coding protein_coding MGP_BALBcJ_T0039929.1 MGP_BALBcJ_G0021470.1 mouse_genomes_project 14 60954192 60980407 + MGP_BALBcJ_P0039929 Kctd9 protein_coding protein_coding MGP_BALBcJ_T0039930.1 MGP_BALBcJ_G0021470.1 mouse_genomes_project 14 60954205 60980259 + MGP_BALBcJ_P0039930 Kctd9 protein_coding protein_coding MGP_BALBcJ_T0039931.1 MGP_BALBcJ_G0021470.1 mouse_genomes_project 14 60954234 60967790 + MGP_BALBcJ_P0039931 Kctd9 protein_coding protein_coding MGP_BALBcJ_T0039932.1 MGP_BALBcJ_G0021470.1 mouse_genomes_project 14 60954379 60980258 + MGP_BALBcJ_P0039932 Kctd9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039419.1 MGP_BALBcJ_G0021286.1 mouse_genomes_project 14 47697356 47699165 - MGP_BALBcJ_P0039419 Cebpe protein_coding protein_coding MGP_BALBcJ_T0038945.1 MGP_BALBcJ_G0021139.1 mouse_genomes_project 14 29546089 29566499 - MGP_BALBcJ_P0038945 Cdhr1 protein_coding protein_coding MGP_BALBcJ_T0040285.1 MGP_BALBcJ_G0021600.1 mouse_genomes_project 14 98668907 98692643 - MGP_BALBcJ_P0040285 Rbm26 protein_coding protein_coding MGP_BALBcJ_T0040286.1 MGP_BALBcJ_G0021600.1 mouse_genomes_project 14 98677121 98738709 - MGP_BALBcJ_P0040286 Rbm26 protein_coding protein_coding MGP_BALBcJ_T0040287.1 MGP_BALBcJ_G0021600.1 mouse_genomes_project 14 98677142 98739172 - MGP_BALBcJ_P0040287 Rbm26 protein_coding protein_coding MGP_BALBcJ_T0040288.1 MGP_BALBcJ_G0021600.1 mouse_genomes_project 14 98677219 98739176 - MGP_BALBcJ_P0040288 Rbm26 protein_coding protein_coding MGP_BALBcJ_T0040289.1 MGP_BALBcJ_G0021600.1 mouse_genomes_project 14 98678468 98739113 - MGP_BALBcJ_P0040289 Rbm26 protein_coding protein_coding MGP_BALBcJ_T0040077.1 MGP_BALBcJ_G0021522.1 mouse_genomes_project 14 66378168 66401217 - MGP_BALBcJ_P0040077 Itm2b protein_coding protein_coding MGP_BALBcJ_T0038318.1 MGP_BALBcJ_G0020967.1 mouse_genomes_project 14 8765026 8833871 + MGP_BALBcJ_P0038318 Top2b protein_coding protein_coding MGP_BALBcJ_T0038319.1 MGP_BALBcJ_G0020967.1 mouse_genomes_project 14 8791960 8795810 + Top2b protein_coding retained_intron MGP_BALBcJ_T0038320.1 MGP_BALBcJ_G0020967.1 mouse_genomes_project 14 8812831 8820114 + MGP_BALBcJ_P0038320 Top2b protein_coding protein_coding MGP_BALBcJ_T0038321.1 MGP_BALBcJ_G0020967.1 mouse_genomes_project 14 8815008 8819793 + MGP_BALBcJ_P0038321 Top2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038322.1 MGP_BALBcJ_G0020967.1 mouse_genomes_project 14 8816800 8828521 + MGP_BALBcJ_P0038322 Top2b protein_coding protein_coding MGP_BALBcJ_T0038323.1 MGP_BALBcJ_G0020967.1 mouse_genomes_project 14 8826371 8831589 + Top2b protein_coding retained_intron MGP_BALBcJ_T0099408.1 MGP_BALBcJ_G0037444.1 mouse_genomes_project 14 41594090 41594210 - Gm23470 snRNA snRNA MGP_BALBcJ_T0039848.1 MGP_BALBcJ_G0021441.1 mouse_genomes_project 14 58219895 58266291 - MGP_BALBcJ_P0039848 Extl3 protein_coding protein_coding MGP_BALBcJ_T0002525.1 MGP_BALBcJ_G0002428.1 mouse_genomes_project 14 47178449 47178508 + MGP_BALBcJ_P0002525 Traj30 TR_J_gene TR_J_gene MGP_BALBcJ_T0017364.1 MGP_BALBcJ_G0015210.1 mouse_genomes_project 14 60460515 60461207 - Gm20675 processed_transcript processed_transcript MGP_BALBcJ_T0039657.1 MGP_BALBcJ_G0021370.1 mouse_genomes_project 14 50533497 50628789 + MGP_BALBcJ_P0039657 Ift88 protein_coding protein_coding MGP_BALBcJ_T0039658.1 MGP_BALBcJ_G0021370.1 mouse_genomes_project 14 50533515 50548985 + MGP_BALBcJ_P0039658 Ift88 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039659.1 MGP_BALBcJ_G0021370.1 mouse_genomes_project 14 50533541 50628789 + Ift88 protein_coding retained_intron MGP_BALBcJ_T0039660.1 MGP_BALBcJ_G0021370.1 mouse_genomes_project 14 50553652 50588967 + MGP_BALBcJ_P0039660 Ift88 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039661.1 MGP_BALBcJ_G0021370.1 mouse_genomes_project 14 50590643 50598587 + Ift88 protein_coding retained_intron MGP_BALBcJ_T0039196.1 MGP_BALBcJ_G0021237.1 mouse_genomes_project 14 44227714 44233358 + MGP_BALBcJ_P0039196 protein_coding protein_coding MGP_BALBcJ_T0002522.1 MGP_BALBcJ_G0002425.1 mouse_genomes_project 14 47174075 47174132 + MGP_BALBcJ_P0002522 Traj33 TR_J_gene TR_J_gene MGP_BALBcJ_T0038402.1 MGP_BALBcJ_G0020993.1 mouse_genomes_project 14 13217568 13226869 - MGP_BALBcJ_P0038402 Synpo2l protein_coding protein_coding MGP_BALBcJ_T0038403.1 MGP_BALBcJ_G0020993.1 mouse_genomes_project 14 13217570 13223197 - MGP_BALBcJ_P0038403 Synpo2l protein_coding protein_coding MGP_BALBcJ_T0038404.1 MGP_BALBcJ_G0020993.1 mouse_genomes_project 14 13218040 13226917 - MGP_BALBcJ_P0038404 Synpo2l protein_coding protein_coding MGP_BALBcJ_T0100693.1 MGP_BALBcJ_G0038729.1 mouse_genomes_project 14 55649075 55649205 + Gm24625 snoRNA snoRNA MGP_BALBcJ_T0039849.1 MGP_BALBcJ_G0021442.1 mouse_genomes_project 14 58357277 58418327 - MGP_BALBcJ_P0039849 Fzd3 protein_coding protein_coding MGP_BALBcJ_T0039850.1 MGP_BALBcJ_G0021442.1 mouse_genomes_project 14 58365970 58383965 - Fzd3 protein_coding processed_transcript MGP_BALBcJ_T0039945.1 MGP_BALBcJ_G0021480.1 mouse_genomes_project 14 62423439 62427464 + MGP_BALBcJ_P0039945 Nkx3-1 protein_coding protein_coding MGP_BALBcJ_T0039321.1 MGP_BALBcJ_G0021259.1 mouse_genomes_project 14 45278333 45279275 - MGP_BALBcJ_P0039321 Olfr1513 protein_coding protein_coding MGP_BALBcJ_T0040129.1 MGP_BALBcJ_G0021544.1 mouse_genomes_project 14 69170502 69196991 + MGP_BALBcJ_P0040129 Nufip1 protein_coding protein_coding MGP_BALBcJ_T0039933.1 MGP_BALBcJ_G0021471.1 mouse_genomes_project 14 60983317 60987514 + MGP_BALBcJ_P0039933 Gnrh1 protein_coding protein_coding MGP_BALBcJ_T0040007.1 MGP_BALBcJ_G0021502.1 mouse_genomes_project 14 63470225 63474949 - MGP_BALBcJ_P0040007 Polr3d protein_coding protein_coding MGP_BALBcJ_T0040008.1 MGP_BALBcJ_G0021502.1 mouse_genomes_project 14 63470225 63474705 - MGP_BALBcJ_P0040008 Polr3d protein_coding protein_coding MGP_BALBcJ_T0098838.1 MGP_BALBcJ_G0036888.1 mouse_genomes_project 14 16827273 16832449 - Gm17105 sense_intronic sense_intronic MGP_BALBcJ_T0040359.1 MGP_BALBcJ_G0021633.1 mouse_genomes_project 14 115804086 115807809 + MGP_BALBcJ_P0040359 Timm8a2 protein_coding protein_coding MGP_BALBcJ_T0013005.1 MGP_BALBcJ_G0011102.1 mouse_genomes_project 14 81631977 81632961 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009959.1 MGP_BALBcJ_G0008084.1 mouse_genomes_project 14 27357694 27357792 + Mir346 miRNA miRNA MGP_BALBcJ_T0100671.1 MGP_BALBcJ_G0038707.1 mouse_genomes_project 14 4645150 4645279 - Gm24578 snoRNA snoRNA MGP_BALBcJ_T0039080.1 MGP_BALBcJ_G0021176.1 mouse_genomes_project 14 40656807 40657254 - MGP_BALBcJ_P0039080 Gm5612 protein_coding protein_coding MGP_BALBcJ_T0039476.1 MGP_BALBcJ_G0021304.1 mouse_genomes_project 14 48104874 48114981 - MGP_BALBcJ_P0039476 Jph4 protein_coding protein_coding MGP_BALBcJ_T0039477.1 MGP_BALBcJ_G0021304.1 mouse_genomes_project 14 48105321 48113598 - MGP_BALBcJ_P0039477 Jph4 protein_coding protein_coding MGP_BALBcJ_T0039478.1 MGP_BALBcJ_G0021304.1 mouse_genomes_project 14 48107687 48108604 - Jph4 protein_coding retained_intron MGP_BALBcJ_T0039479.1 MGP_BALBcJ_G0021304.1 mouse_genomes_project 14 48109535 48114626 - Jph4 protein_coding retained_intron MGP_BALBcJ_T0039185.1 MGP_BALBcJ_G0021229.1 mouse_genomes_project 14 43824800 43844937 + MGP_BALBcJ_P0039185 Rnase4 protein_coding protein_coding MGP_BALBcJ_T0039187.1 MGP_BALBcJ_G0021229.1 mouse_genomes_project 14 43829673 43844937 + MGP_BALBcJ_P0039187 Rnase4 protein_coding protein_coding MGP_BALBcJ_T0000923.1 MGP_BALBcJ_G0000854.1 mouse_genomes_project 14 108518156 108518420 - TEC TEC MGP_BALBcJ_T0038676.1 MGP_BALBcJ_G0021064.1 mouse_genomes_project 14 23283561 23297856 - MGP_BALBcJ_P0038676 Itih1 protein_coding protein_coding MGP_BALBcJ_T0038677.1 MGP_BALBcJ_G0021064.1 mouse_genomes_project 14 23283561 23297844 - MGP_BALBcJ_P0038677 Itih1 protein_coding protein_coding MGP_BALBcJ_T0038678.1 MGP_BALBcJ_G0021064.1 mouse_genomes_project 14 23297256 23297853 - Itih1 protein_coding retained_intron MGP_BALBcJ_T0009951.1 MGP_BALBcJ_G0008076.1 mouse_genomes_project 14 14585916 14586029 - Gm27532 miRNA miRNA MGP_BALBcJ_T0039033.1 MGP_BALBcJ_G0021170.1 mouse_genomes_project 14 39788079 39827202 - MGP_BALBcJ_P0039033 Wdhd1 protein_coding protein_coding MGP_BALBcJ_T0039034.1 MGP_BALBcJ_G0021170.1 mouse_genomes_project 14 39788079 39827160 - MGP_BALBcJ_P0039034 Wdhd1 protein_coding protein_coding MGP_BALBcJ_T0039035.1 MGP_BALBcJ_G0021170.1 mouse_genomes_project 14 39788080 39827227 - MGP_BALBcJ_P0039035 Wdhd1 protein_coding protein_coding MGP_BALBcJ_T0039036.1 MGP_BALBcJ_G0021170.1 mouse_genomes_project 14 39788754 39826967 - MGP_BALBcJ_P0039036 Wdhd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0039037.1 MGP_BALBcJ_G0021170.1 mouse_genomes_project 14 39806352 39827202 - MGP_BALBcJ_P0039037 Wdhd1 protein_coding protein_coding MGP_BALBcJ_T0039038.1 MGP_BALBcJ_G0021170.1 mouse_genomes_project 14 39822848 39827177 - Wdhd1 protein_coding retained_intron MGP_BALBcJ_T0003542.1 MGP_BALBcJ_G0003220.1 mouse_genomes_project 14 53889266 53897358 - Mipepos antisense antisense MGP_BALBcJ_T0006656.1 MGP_BALBcJ_G0005499.1 mouse_genomes_project 14 24320819 24342494 + D830044D21Rik lincRNA lincRNA MGP_BALBcJ_T0040126.1 MGP_BALBcJ_G0021541.1 mouse_genomes_project 14 68957114 69069411 - MGP_BALBcJ_P0040126 Gtf2f2 protein_coding protein_coding MGP_BALBcJ_T0099413.1 MGP_BALBcJ_G0037449.1 mouse_genomes_project 14 45272177 45272281 + Gm26328 snRNA snRNA MGP_BALBcJ_T0002496.1 MGP_BALBcJ_G0002403.1 mouse_genomes_project 14 47141279 47141341 + MGP_BALBcJ_P0002496 Traj59 TR_J_gene TR_J_gene MGP_BALBcJ_T0002497.1 MGP_BALBcJ_G0002403.1 mouse_genomes_project 14 47141279 47141343 + Traj59 TR_J_gene processed_transcript MGP_BALBcJ_T0038416.1 MGP_BALBcJ_G0021001.1 mouse_genomes_project 14 13495178 13594946 + MGP_BALBcJ_P0038416 Vcl protein_coding protein_coding MGP_BALBcJ_T0009987.1 MGP_BALBcJ_G0008112.1 mouse_genomes_project 14 71347136 71347243 - Gm23652 miRNA miRNA MGP_BALBcJ_T0039387.1 MGP_BALBcJ_G0021279.1 mouse_genomes_project 14 47601269 47605207 - MGP_BALBcJ_P0039387 Psmb5 protein_coding protein_coding MGP_BALBcJ_T0039087.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41242065 41249933 - MGP_BALBcJ_P0039087 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039088.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41242549 41252199 - MGP_BALBcJ_P0039088 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039089.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41242549 41247529 - MGP_BALBcJ_P0039089 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039090.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41243295 41246331 - MGP_BALBcJ_P0039090 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039091.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41243332 41252330 - MGP_BALBcJ_P0039091 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039092.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41243684 41252194 - MGP_BALBcJ_P0039092 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039093.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41245746 41252194 - MGP_BALBcJ_P0039093 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039094.1 MGP_BALBcJ_G0021179.1 mouse_genomes_project 14 41245796 41250208 - MGP_BALBcJ_P0039094 Otx2 protein_coding protein_coding MGP_BALBcJ_T0039787.1 MGP_BALBcJ_G0021415.1 mouse_genomes_project 14 55972021 56097316 + MGP_BALBcJ_P0039787 Wdfy2 protein_coding protein_coding MGP_BALBcJ_T0039765.1 MGP_BALBcJ_G0021403.1 mouse_genomes_project 14 54431367 54433551 + MGP_BALBcJ_P0039765 Arl11 protein_coding protein_coding MGP_BALBcJ_T0038339.1 MGP_BALBcJ_G0020973.1 mouse_genomes_project 14 10640406 10699536 - MGP_BALBcJ_P0038339 Ube2e1 protein_coding protein_coding MGP_BALBcJ_T0038340.1 MGP_BALBcJ_G0020973.1 mouse_genomes_project 14 10642432 10698705 - Ube2e1 protein_coding retained_intron MGP_BALBcJ_T0038341.1 MGP_BALBcJ_G0020973.1 mouse_genomes_project 14 10691714 10698774 - Ube2e1 protein_coding retained_intron MGP_BALBcJ_T0038234.1 MGP_BALBcJ_G0020936.1 mouse_genomes_project 14 307772 368193 + MGP_BALBcJ_P0038234 Abhd6 protein_coding protein_coding MGP_BALBcJ_T0038235.1 MGP_BALBcJ_G0020936.1 mouse_genomes_project 14 307836 367499 + MGP_BALBcJ_P0038235 Abhd6 protein_coding protein_coding MGP_BALBcJ_T0099410.1 MGP_BALBcJ_G0037446.1 mouse_genomes_project 14 42404167 42404253 + Gm22989 snRNA snRNA MGP_BALBcJ_T0038840.1 MGP_BALBcJ_G0021095.1 mouse_genomes_project 14 24765875 24792678 + MGP_BALBcJ_P0038840 Ogdhl protein_coding unknown_likely_coding MGP_BALBcJ_T0038841.1 MGP_BALBcJ_G0021095.1 mouse_genomes_project 14 24765882 24792271 + MGP_BALBcJ_P0038841 Ogdhl protein_coding protein_coding MGP_BALBcJ_T0039626.1 MGP_BALBcJ_G0021350.1 mouse_genomes_project 14 49240132 49265775 - MGP_BALBcJ_P0039626 Gzmn protein_coding protein_coding MGP_BALBcJ_T0100697.1 MGP_BALBcJ_G0038733.1 mouse_genomes_project 14 60185779 60185912 + Gm24258 snoRNA snoRNA MGP_BALBcJ_T0038415.1 MGP_BALBcJ_G0021000.1 mouse_genomes_project 14 13401871 13408567 + MGP_BALBcJ_P0038415 Plau protein_coding protein_coding MGP_BALBcJ_T0006636.1 MGP_BALBcJ_G0005487.1 mouse_genomes_project 14 7837040 7851832 + B230110C06Rik lincRNA lincRNA MGP_BALBcJ_T0006637.1 MGP_BALBcJ_G0005487.1 mouse_genomes_project 14 7837601 7851294 + B230110C06Rik lincRNA lincRNA MGP_BALBcJ_T0100691.1 MGP_BALBcJ_G0038727.1 mouse_genomes_project 14 50438703 50438823 - Gm23593 snoRNA snoRNA MGP_BALBcJ_T0039629.1 MGP_BALBcJ_G0021353.1 mouse_genomes_project 14 49334460 49337865 - MGP_BALBcJ_P0039629 Gzmb protein_coding protein_coding MGP_BALBcJ_T0100684.1 MGP_BALBcJ_G0038720.1 mouse_genomes_project 14 29899452 29899583 - Gm23909 snoRNA snoRNA MGP_BALBcJ_T0038241.1 MGP_BALBcJ_G0020940.1 mouse_genomes_project 14 522852 533560 + MGP_BALBcJ_P0038241 Kctd6 protein_coding protein_coding MGP_BALBcJ_T0038242.1 MGP_BALBcJ_G0020940.1 mouse_genomes_project 14 524503 533554 + MGP_BALBcJ_P0038242 Kctd6 protein_coding protein_coding MGP_BALBcJ_T0039880.1 MGP_BALBcJ_G0021456.1 mouse_genomes_project 14 59259970 59302122 - MGP_BALBcJ_P0039880 Ephx2 protein_coding protein_coding MGP_BALBcJ_T0099446.1 MGP_BALBcJ_G0037482.1 mouse_genomes_project 14 116175101 116175208 - Gm25464 snRNA snRNA MGP_BALBcJ_T0012977.1 MGP_BALBcJ_G0011074.1 mouse_genomes_project 14 38560824 38562179 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012961.1 MGP_BALBcJ_G0011058.1 mouse_genomes_project 14 18512822 18514011 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002512.1 MGP_BALBcJ_G0002415.1 mouse_genomes_project 14 47162465 47162526 + MGP_BALBcJ_P0002512 Traj44 TR_J_gene TR_J_gene MGP_BALBcJ_T0040099.1 MGP_BALBcJ_G0021531.1 mouse_genomes_project 14 68133434 68184300 - MGP_BALBcJ_P0040099 Lrrc63 protein_coding protein_coding MGP_BALBcJ_T0040128.1 MGP_BALBcJ_G0021543.1 mouse_genomes_project 14 69145310 69170427 - MGP_BALBcJ_P0040128 Gpalpp1 protein_coding protein_coding MGP_BALBcJ_T0040176.1 MGP_BALBcJ_G0021561.1 mouse_genomes_project 14 72514634 72536656 + MGP_BALBcJ_P0040176 Mtrf1 protein_coding protein_coding MGP_BALBcJ_T0012953.1 MGP_BALBcJ_G0011050.1 mouse_genomes_project 14 5697163 5697295 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002593.1 MGP_BALBcJ_G0002490.1 mouse_genomes_project 14 45605526 45605980 + MGP_BALBcJ_P0002593 Trav6-2 TR_V_gene TR_V_gene MGP_BALBcJ_T0002594.1 MGP_BALBcJ_G0002490.1 mouse_genomes_project 14 45605526 45605980 + MGP_BALBcJ_P0002594 Trav6-2 TR_V_gene TR_V_gene MGP_BALBcJ_T0039913.1 MGP_BALBcJ_G0021466.1 mouse_genomes_project 14 60200486 60234572 - MGP_BALBcJ_P0039913 Bnip3l protein_coding protein_coding MGP_BALBcJ_T0039914.1 MGP_BALBcJ_G0021466.1 mouse_genomes_project 14 60200486 60234551 - MGP_BALBcJ_P0039914 Bnip3l protein_coding protein_coding MGP_BALBcJ_T0039915.1 MGP_BALBcJ_G0021466.1 mouse_genomes_project 14 60210308 60216418 - Bnip3l protein_coding retained_intron MGP_BALBcJ_T0098502.1 MGP_BALBcJ_G0036556.1 mouse_genomes_project 14 21335205 21335309 - Gm23999 rRNA rRNA MGP_BALBcJ_T0039856.1 MGP_BALBcJ_G0021447.1 mouse_genomes_project 14 58753604 58804971 + MGP_BALBcJ_P0039856 Nuggc protein_coding protein_coding MGP_BALBcJ_T0039857.1 MGP_BALBcJ_G0021447.1 mouse_genomes_project 14 58760583 58804884 + MGP_BALBcJ_P0039857 Nuggc protein_coding protein_coding MGP_BALBcJ_T0039618.1 MGP_BALBcJ_G0021342.1 mouse_genomes_project 14 49055996 49058424 + MGP_BALBcJ_P0039618 Mcpt1 protein_coding protein_coding MGP_BALBcJ_T0038589.1 MGP_BALBcJ_G0021038.1 mouse_genomes_project 14 19208447 19229362 + MGP_BALBcJ_P0038589 Asb14 protein_coding protein_coding MGP_BALBcJ_T0038590.1 MGP_BALBcJ_G0021038.1 mouse_genomes_project 14 19208492 19228522 + MGP_BALBcJ_P0038590 Asb14 protein_coding protein_coding MGP_BALBcJ_T0038591.1 MGP_BALBcJ_G0021038.1 mouse_genomes_project 14 19208502 19214798 + Asb14 protein_coding processed_transcript MGP_BALBcJ_T0038592.1 MGP_BALBcJ_G0021038.1 mouse_genomes_project 14 19208510 19216998 + MGP_BALBcJ_P0038592 Asb14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038593.1 MGP_BALBcJ_G0021038.1 mouse_genomes_project 14 19216947 19229363 + MGP_BALBcJ_P0038593 Asb14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100701.1 MGP_BALBcJ_G0038737.1 mouse_genomes_project 14 68906670 68906800 + Snora31 snoRNA snoRNA MGP_BALBcJ_T0039130.1 MGP_BALBcJ_G0021197.1 mouse_genomes_project 14 42987011 42988005 - MGP_BALBcJ_P0039130 Olfr733 protein_coding protein_coding MGP_BALBcJ_T0099432.1 MGP_BALBcJ_G0037468.1 mouse_genomes_project 14 92926164 92926286 - Gm22984 snRNA snRNA MGP_BALBcJ_T0038255.1 MGP_BALBcJ_G0020943.1 mouse_genomes_project 14 659540 689396 - MGP_BALBcJ_P0038255 Oit1 protein_coding protein_coding MGP_BALBcJ_T0003503.1 MGP_BALBcJ_G0003188.1 mouse_genomes_project 14 14306880 14311675 + Gm15935 antisense antisense MGP_BALBcJ_T0003504.1 MGP_BALBcJ_G0003188.1 mouse_genomes_project 14 14306902 14311970 + Gm15935 antisense antisense MGP_BALBcJ_T0003505.1 MGP_BALBcJ_G0003188.1 mouse_genomes_project 14 14306926 14311421 + Gm15935 antisense antisense MGP_BALBcJ_T0038299.1 MGP_BALBcJ_G0020960.1 mouse_genomes_project 14 6723205 6732191 + MGP_BALBcJ_P0038299 Il3ra protein_coding protein_coding MGP_BALBcJ_T0038523.1 MGP_BALBcJ_G0021020.1 mouse_genomes_project 14 18415617 18462418 + MGP_BALBcJ_P0038523 Anxa11 protein_coding protein_coding MGP_BALBcJ_T0038524.1 MGP_BALBcJ_G0021020.1 mouse_genomes_project 14 18415644 18462418 + Anxa11 protein_coding retained_intron MGP_BALBcJ_T0038525.1 MGP_BALBcJ_G0021020.1 mouse_genomes_project 14 18415644 18453792 + Anxa11 protein_coding retained_intron MGP_BALBcJ_T0038526.1 MGP_BALBcJ_G0021020.1 mouse_genomes_project 14 18415644 18454185 + MGP_BALBcJ_P0038526 Anxa11 protein_coding protein_coding MGP_BALBcJ_T0100713.1 MGP_BALBcJ_G0038749.1 mouse_genomes_project 14 90859919 90860057 - Gm23276 snoRNA snoRNA MGP_BALBcJ_T0006647.1 MGP_BALBcJ_G0005495.1 mouse_genomes_project 14 18124512 18130464 - Gm26772 lincRNA lincRNA MGP_BALBcJ_T0006717.1 MGP_BALBcJ_G0005545.1 mouse_genomes_project 14 113471661 113474002 + 1700006F04Rik lincRNA lincRNA MGP_BALBcJ_T0038623.1 MGP_BALBcJ_G0021053.1 mouse_genomes_project 14 22334848 22366426 + MGP_BALBcJ_P0038623 Chdh protein_coding protein_coding MGP_BALBcJ_T0038624.1 MGP_BALBcJ_G0021053.1 mouse_genomes_project 14 22334996 22353176 + Chdh protein_coding processed_transcript MGP_BALBcJ_T0038625.1 MGP_BALBcJ_G0021053.1 mouse_genomes_project 14 22348583 22364209 + MGP_BALBcJ_P0038625 Chdh protein_coding protein_coding MGP_BALBcJ_T0038956.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33496371 33516800 - MGP_BALBcJ_P0038956 Fam213a protein_coding protein_coding MGP_BALBcJ_T0038957.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33497169 33507514 - MGP_BALBcJ_P0038957 Fam213a protein_coding protein_coding MGP_BALBcJ_T0038958.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33500371 33507960 - MGP_BALBcJ_P0038958 Fam213a protein_coding protein_coding MGP_BALBcJ_T0038959.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33501844 33506085 - Fam213a protein_coding retained_intron MGP_BALBcJ_T0038960.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33501882 33509957 - MGP_BALBcJ_P0038960 Fam213a protein_coding protein_coding MGP_BALBcJ_T0038961.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33501924 33516752 - MGP_BALBcJ_P0038961 Fam213a protein_coding protein_coding MGP_BALBcJ_T0038962.1 MGP_BALBcJ_G0021145.1 mouse_genomes_project 14 33507021 33509901 - MGP_BALBcJ_P0038962 Fam213a protein_coding protein_coding MGP_BALBcJ_T0100711.1 MGP_BALBcJ_G0038747.1 mouse_genomes_project 14 90092647 90092777 + Gm25133 snoRNA snoRNA MGP_BALBcJ_T0006709.1 MGP_BALBcJ_G0005538.1 mouse_genomes_project 14 96529084 96533395 + Gm26778 lincRNA lincRNA MGP_BALBcJ_T0099421.1 MGP_BALBcJ_G0037457.1 mouse_genomes_project 14 63459529 63459631 - Gm24890 snRNA snRNA MGP_BALBcJ_T0039770.1 MGP_BALBcJ_G0021407.1 mouse_genomes_project 14 54721498 54728703 + MGP_BALBcJ_P0039770 Trim13 protein_coding protein_coding MGP_BALBcJ_T0038895.1 MGP_BALBcJ_G0021121.1 mouse_genomes_project 14 26679619 26682396 + Syt15 protein_coding retained_intron MGP_BALBcJ_T0038896.1 MGP_BALBcJ_G0021121.1 mouse_genomes_project 14 26680070 26687766 + MGP_BALBcJ_P0038896 Syt15 protein_coding protein_coding MGP_BALBcJ_T0038897.1 MGP_BALBcJ_G0021121.1 mouse_genomes_project 14 26680071 26690447 + MGP_BALBcJ_P0038897 Syt15 protein_coding protein_coding MGP_BALBcJ_T0009984.1 MGP_BALBcJ_G0008109.1 mouse_genomes_project 14 66222093 66222182 - Mir687 miRNA miRNA MGP_BALBcJ_T0098839.1 MGP_BALBcJ_G0036889.1 mouse_genomes_project 14 39501357 39505007 + Gm15562 sense_intronic sense_intronic MGP_BALBcJ_T0038971.1 MGP_BALBcJ_G0021151.1 mouse_genomes_project 14 33674309 33687323 - MGP_BALBcJ_P0038971 Sftpd protein_coding protein_coding MGP_BALBcJ_T0038256.1 MGP_BALBcJ_G0020944.1 mouse_genomes_project 14 743935 973845 - MGP_BALBcJ_P0038256 4930452B06Rik protein_coding protein_coding MGP_BALBcJ_T0012957.1 MGP_BALBcJ_G0011054.1 mouse_genomes_project 14 11190355 11191525 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038942.1 MGP_BALBcJ_G0021136.1 mouse_genomes_project 14 29503865 29515322 - MGP_BALBcJ_P0038942 Rgr protein_coding protein_coding MGP_BALBcJ_T0009992.1 MGP_BALBcJ_G0008117.1 mouse_genomes_project 14 97197964 97198069 - Gm22877 miRNA miRNA MGP_BALBcJ_T0006642.1 MGP_BALBcJ_G0005491.1 mouse_genomes_project 14 17229290 17233416 + 4931403M11Rik lincRNA lincRNA MGP_BALBcJ_T0040240.1 MGP_BALBcJ_G0021588.1 mouse_genomes_project 14 95292603 95293038 - MGP_BALBcJ_P0040240 Gm9922 protein_coding protein_coding MGP_BALBcJ_T0009950.1 MGP_BALBcJ_G0008075.1 mouse_genomes_project 14 13250789 13250858 + Mir6946 miRNA miRNA MGP_BALBcJ_T0012996.1 MGP_BALBcJ_G0011093.1 mouse_genomes_project 14 58004216 58004535 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039145.1 MGP_BALBcJ_G0021209.1 mouse_genomes_project 14 43439287 43440364 + MGP_BALBcJ_P0039145 Olfr748 protein_coding protein_coding MGP_BALBcJ_T0039386.1 MGP_BALBcJ_G0021278.1 mouse_genomes_project 14 47570347 47593448 - MGP_BALBcJ_P0039386 4931414P19Rik protein_coding protein_coding MGP_BALBcJ_T0040171.1 MGP_BALBcJ_G0021560.1 mouse_genomes_project 14 72448346 72458078 - Naa16 protein_coding retained_intron MGP_BALBcJ_T0040172.1 MGP_BALBcJ_G0021560.1 mouse_genomes_project 14 72448649 72505647 - MGP_BALBcJ_P0040172 Naa16 protein_coding protein_coding MGP_BALBcJ_T0040173.1 MGP_BALBcJ_G0021560.1 mouse_genomes_project 14 72455857 72501974 - MGP_BALBcJ_P0040173 Naa16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040174.1 MGP_BALBcJ_G0021560.1 mouse_genomes_project 14 72483995 72505561 - MGP_BALBcJ_P0040174 Naa16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040175.1 MGP_BALBcJ_G0021560.1 mouse_genomes_project 14 72499472 72505559 - Naa16 protein_coding retained_intron MGP_BALBcJ_T0040369.1 MGP_BALBcJ_G0021639.1 mouse_genomes_project 14 116281673 116283209 + MGP_BALBcJ_P0040369 Gm10837 protein_coding protein_coding MGP_BALBcJ_T0039756.1 MGP_BALBcJ_G0021401.1 mouse_genomes_project 14 54247497 54350448 + MGP_BALBcJ_P0039756 protein_coding protein_coding MGP_BALBcJ_T0039757.1 MGP_BALBcJ_G0021401.1 mouse_genomes_project 14 54247531 54308975 + MGP_BALBcJ_P0039757 protein_coding protein_coding MGP_BALBcJ_T0039758.1 MGP_BALBcJ_G0021401.1 mouse_genomes_project 14 54257088 54324807 + MGP_BALBcJ_P0039758 protein_coding protein_coding MGP_BALBcJ_T0039759.1 MGP_BALBcJ_G0021401.1 mouse_genomes_project 14 54282496 54304961 + MGP_BALBcJ_P0039759 protein_coding protein_coding MGP_BALBcJ_T0039760.1 MGP_BALBcJ_G0021401.1 mouse_genomes_project 14 54282711 54324812 + MGP_BALBcJ_P0039760 protein_coding unknown_likely_coding MGP_BALBcJ_T0039761.1 MGP_BALBcJ_G0021401.1 mouse_genomes_project 14 54298141 54314230 + protein_coding retained_intron MGP_BALBcJ_T0003548.1 MGP_BALBcJ_G0003224.1 mouse_genomes_project 14 57271103 57276046 - 4930471C04Rik antisense antisense MGP_BALBcJ_T0012960.1 MGP_BALBcJ_G0011057.1 mouse_genomes_project 14 18382901 18383148 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100699.1 MGP_BALBcJ_G0038735.1 mouse_genomes_project 14 61404710 61404832 - Gm22319 snoRNA snoRNA MGP_BALBcJ_T0017383.1 MGP_BALBcJ_G0015219.1 mouse_genomes_project 14 99059947 99066767 + 4930449E01Rik processed_transcript lincRNA MGP_BALBcJ_T0017384.1 MGP_BALBcJ_G0015219.1 mouse_genomes_project 14 99062081 99062441 + 4930449E01Rik processed_transcript TEC MGP_BALBcJ_T0017385.1 MGP_BALBcJ_G0015219.1 mouse_genomes_project 14 99064721 99066774 + 4930449E01Rik processed_transcript lincRNA MGP_BALBcJ_T0006638.1 MGP_BALBcJ_G0005488.1 mouse_genomes_project 14 13247223 13263168 - 6230400D17Rik lincRNA lincRNA MGP_BALBcJ_T0039689.1 MGP_BALBcJ_G0021377.1 mouse_genomes_project 14 50940365 50942872 + MGP_BALBcJ_P0039689 Mrpl57 protein_coding protein_coding MGP_BALBcJ_T0101853.1 MGP_BALBcJ_G0039770.1 mouse_genomes_project 14 62624375 62705629 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0009953.1 MGP_BALBcJ_G0008078.1 mouse_genomes_project 14 18110536 18110621 + Mir3075 miRNA miRNA MGP_BALBcJ_T0040360.1 MGP_BALBcJ_G0021634.1 mouse_genomes_project 14 115882354 115936602 + MGP_BALBcJ_P0040360 Tm9sf2 protein_coding protein_coding MGP_BALBcJ_T0040361.1 MGP_BALBcJ_G0021634.1 mouse_genomes_project 14 115882454 115914665 + MGP_BALBcJ_P0040361 Tm9sf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040362.1 MGP_BALBcJ_G0021634.1 mouse_genomes_project 14 115882584 115935714 + MGP_BALBcJ_P0040362 Tm9sf2 protein_coding protein_coding MGP_BALBcJ_T0038761.1 MGP_BALBcJ_G0021079.1 mouse_genomes_project 14 23716146 23752012 + MGP_BALBcJ_P0038761 Capn7 protein_coding protein_coding MGP_BALBcJ_T0038762.1 MGP_BALBcJ_G0021079.1 mouse_genomes_project 14 23716183 23752014 + MGP_BALBcJ_P0038762 Capn7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038763.1 MGP_BALBcJ_G0021079.1 mouse_genomes_project 14 23716215 23752012 + MGP_BALBcJ_P0038763 Capn7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009968.1 MGP_BALBcJ_G0008093.1 mouse_genomes_project 14 49131854 49131922 - Mir6949 miRNA miRNA MGP_BALBcJ_T0003496.1 MGP_BALBcJ_G0003185.1 mouse_genomes_project 14 12957137 12957709 + 7330404K18Rik antisense antisense MGP_BALBcJ_T0002612.1 MGP_BALBcJ_G0002506.1 mouse_genomes_project 14 46071927 46072424 + MGP_BALBcJ_P0002612 TR_V_gene TR_V_gene MGP_BALBcJ_T0002627.1 MGP_BALBcJ_G0002517.1 mouse_genomes_project 14 46694128 46695249 + MGP_BALBcJ_P0002627 TR_V_gene TR_V_gene MGP_BALBcJ_T0002524.1 MGP_BALBcJ_G0002427.1 mouse_genomes_project 14 47176523 47176580 + MGP_BALBcJ_P0002524 Traj31 TR_J_gene TR_J_gene MGP_BALBcJ_T0002537.1 MGP_BALBcJ_G0002440.1 mouse_genomes_project 14 47189780 47189846 + MGP_BALBcJ_P0002537 Traj18 TR_J_gene TR_J_gene MGP_BALBcJ_T0038943.1 MGP_BALBcJ_G0021137.1 mouse_genomes_project 14 29521175 29532273 + MGP_BALBcJ_P0038943 Lrit1 protein_coding protein_coding MGP_BALBcJ_T0011343.1 MGP_BALBcJ_G0009468.1 mouse_genomes_project 14 10244269 10244595 - Gm24140 misc_RNA misc_RNA MGP_BALBcJ_T0013015.1 MGP_BALBcJ_G0011112.1 mouse_genomes_project 14 102327200 102327650 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100678.1 MGP_BALBcJ_G0038714.1 mouse_genomes_project 14 23377535 23377611 - Snord19 snoRNA snoRNA MGP_BALBcJ_T0100687.1 MGP_BALBcJ_G0038723.1 mouse_genomes_project 14 45200986 45201076 + Gm23758 snoRNA snoRNA MGP_BALBcJ_T0039147.1 MGP_BALBcJ_G0021211.1 mouse_genomes_project 14 43460840 43470464 - MGP_BALBcJ_P0039147 protein_coding protein_coding MGP_BALBcJ_T0038929.1 MGP_BALBcJ_G0021133.1 mouse_genomes_project 14 28263847 28268838 - MGP_BALBcJ_P0038929 4930596D02Rik protein_coding protein_coding MGP_BALBcJ_T0038710.1 MGP_BALBcJ_G0021071.1 mouse_genomes_project 14 23506614 23514511 + MGP_BALBcJ_P0038710 Nt5dc2 protein_coding protein_coding MGP_BALBcJ_T0012980.1 MGP_BALBcJ_G0011077.1 mouse_genomes_project 14 45355555 45355840 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040217.1 MGP_BALBcJ_G0021578.1 mouse_genomes_project 14 92600611 92612266 - MGP_BALBcJ_P0040217 Mzt1 protein_coding protein_coding MGP_BALBcJ_T0038846.1 MGP_BALBcJ_G0021100.1 mouse_genomes_project 14 25050286 25100597 + MGP_BALBcJ_P0038846 Prrxl1 protein_coding protein_coding MGP_BALBcJ_T0038847.1 MGP_BALBcJ_G0021100.1 mouse_genomes_project 14 25050287 25081647 + MGP_BALBcJ_P0038847 Prrxl1 protein_coding protein_coding MGP_BALBcJ_T0038848.1 MGP_BALBcJ_G0021100.1 mouse_genomes_project 14 25050420 25081623 + MGP_BALBcJ_P0038848 Prrxl1 protein_coding protein_coding MGP_BALBcJ_T0038849.1 MGP_BALBcJ_G0021100.1 mouse_genomes_project 14 25050746 25100639 + MGP_BALBcJ_P0038849 Prrxl1 protein_coding protein_coding MGP_BALBcJ_T0003562.1 MGP_BALBcJ_G0003234.1 mouse_genomes_project 14 68902230 68903816 - Gm4285 antisense antisense MGP_BALBcJ_T0039384.1 MGP_BALBcJ_G0021276.1 mouse_genomes_project 14 47522256 47538100 - MGP_BALBcJ_P0039384 Haus4 protein_coding protein_coding MGP_BALBcJ_T0006685.1 MGP_BALBcJ_G0005520.1 mouse_genomes_project 14 50682409 50683154 + 1700039M10Rik lincRNA lincRNA MGP_BALBcJ_T0039993.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63333514 63381352 - MGP_BALBcJ_P0039993 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0039994.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63336235 63378358 - MGP_BALBcJ_P0039994 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0039995.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63336249 63381352 - MGP_BALBcJ_P0039995 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0039996.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63338724 63341193 - Slc39a14 protein_coding retained_intron MGP_BALBcJ_T0039997.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63340889 63343878 - Slc39a14 protein_coding retained_intron MGP_BALBcJ_T0039998.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63343911 63381341 - Slc39a14 protein_coding retained_intron MGP_BALBcJ_T0039999.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63345063 63378360 - Slc39a14 protein_coding retained_intron MGP_BALBcJ_T0040000.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63345745 63364130 - MGP_BALBcJ_P0040000 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0040001.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63346418 63381321 - MGP_BALBcJ_P0040001 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0040002.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63346452 63353747 - MGP_BALBcJ_P0040002 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0040003.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63346513 63381342 - MGP_BALBcJ_P0040003 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0040004.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63348685 63361450 - MGP_BALBcJ_P0040004 Slc39a14 protein_coding protein_coding MGP_BALBcJ_T0040005.1 MGP_BALBcJ_G0021500.1 mouse_genomes_project 14 63361008 63381352 - Slc39a14 protein_coding retained_intron MGP_BALBcJ_T0039197.1 MGP_BALBcJ_G0021238.1 mouse_genomes_project 14 44227988 44233682 + MGP_BALBcJ_P0039197 protein_coding protein_coding MGP_BALBcJ_T0039941.1 MGP_BALBcJ_G0021477.1 mouse_genomes_project 14 61841077 61890553 - MGP_BALBcJ_P0039941 Adam28 protein_coding protein_coding MGP_BALBcJ_T0039942.1 MGP_BALBcJ_G0021477.1 mouse_genomes_project 14 61841929 61890553 - MGP_BALBcJ_P0039942 Adam28 protein_coding protein_coding MGP_BALBcJ_T0039830.1 MGP_BALBcJ_G0021435.1 mouse_genomes_project 14 57258121 57269479 + MGP_BALBcJ_P0039830 Prss51 protein_coding protein_coding MGP_BALBcJ_T0039831.1 MGP_BALBcJ_G0021435.1 mouse_genomes_project 14 57265557 57269475 + MGP_BALBcJ_P0039831 Prss51 protein_coding protein_coding MGP_BALBcJ_T0039832.1 MGP_BALBcJ_G0021435.1 mouse_genomes_project 14 57265587 57268919 + MGP_BALBcJ_P0039832 Prss51 protein_coding protein_coding MGP_BALBcJ_T0098327.1 MGP_BALBcJ_G0036381.1 mouse_genomes_project 14 100264608 100264798 - pseudogene pseudogene MGP_BALBcJ_T0039039.1 MGP_BALBcJ_G0021171.1 mouse_genomes_project 14 39827300 39847229 + MGP_BALBcJ_P0039039 Socs4 protein_coding protein_coding MGP_BALBcJ_T0039192.1 MGP_BALBcJ_G0021233.1 mouse_genomes_project 14 43889864 43891627 - MGP_BALBcJ_P0039192 Rnase1 protein_coding protein_coding MGP_BALBcJ_T0039142.1 MGP_BALBcJ_G0021206.1 mouse_genomes_project 14 43161645 43162271 + MGP_BALBcJ_P0039142 protein_coding protein_coding MGP_BALBcJ_T0039181.1 MGP_BALBcJ_G0021225.1 mouse_genomes_project 14 43773783 43774496 - MGP_BALBcJ_P0039181 Rnase11 protein_coding protein_coding MGP_BALBcJ_T0038600.1 MGP_BALBcJ_G0021042.1 mouse_genomes_project 14 19534770 19538094 + MGP_BALBcJ_P0038600 Vdac3-ps1 protein_coding protein_coding MGP_BALBcJ_T0040363.1 MGP_BALBcJ_G0021635.1 mouse_genomes_project 14 115958714 116189226 + MGP_BALBcJ_P0040363 Clybl protein_coding protein_coding MGP_BALBcJ_T0039606.1 MGP_BALBcJ_G0021334.1 mouse_genomes_project 14 48791629 48806783 - MGP_BALBcJ_P0039606 Adcy4 protein_coding unknown_likely_coding MGP_BALBcJ_T0100669.1 MGP_BALBcJ_G0038705.1 mouse_genomes_project 14 2774718 2774918 + Gm22053 snoRNA snoRNA MGP_BALBcJ_T0039388.1 MGP_BALBcJ_G0021280.1 mouse_genomes_project 14 47612466 47616628 + MGP_BALBcJ_P0039388 Psmb11 protein_coding protein_coding MGP_BALBcJ_T0038315.1 MGP_BALBcJ_G0020966.1 mouse_genomes_project 14 8638882 8709861 + MGP_BALBcJ_P0038315 Ngly1 protein_coding protein_coding MGP_BALBcJ_T0038316.1 MGP_BALBcJ_G0020966.1 mouse_genomes_project 14 8638929 8680515 + Ngly1 protein_coding retained_intron MGP_BALBcJ_T0038317.1 MGP_BALBcJ_G0020966.1 mouse_genomes_project 14 8678188 8680638 + Ngly1 protein_coding retained_intron MGP_BALBcJ_T0040220.1 MGP_BALBcJ_G0021581.1 mouse_genomes_project 14 92666895 92829311 + MGP_BALBcJ_P0040220 protein_coding protein_coding MGP_BALBcJ_T0009975.1 MGP_BALBcJ_G0008100.1 mouse_genomes_project 14 56894981 56895060 + Mir598 miRNA miRNA MGP_BALBcJ_T0039495.1 MGP_BALBcJ_G0021310.1 mouse_genomes_project 14 48532840 48542572 + MGP_BALBcJ_P0039495 Pck2 protein_coding protein_coding MGP_BALBcJ_T0002696.1 MGP_BALBcJ_G0002572.1 mouse_genomes_project 14 45819951 45820440 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0039901.1 MGP_BALBcJ_G0021461.1 mouse_genomes_project 14 59824310 59921909 + MGP_BALBcJ_P0039901 Adra1a protein_coding protein_coding MGP_BALBcJ_T0039902.1 MGP_BALBcJ_G0021461.1 mouse_genomes_project 14 59824317 59921773 + MGP_BALBcJ_P0039902 Adra1a protein_coding protein_coding MGP_BALBcJ_T0039903.1 MGP_BALBcJ_G0021461.1 mouse_genomes_project 14 59824368 59829393 + Adra1a protein_coding retained_intron MGP_BALBcJ_T0039904.1 MGP_BALBcJ_G0021461.1 mouse_genomes_project 14 59824400 59918429 + MGP_BALBcJ_P0039904 Adra1a protein_coding protein_coding MGP_BALBcJ_T0039905.1 MGP_BALBcJ_G0021461.1 mouse_genomes_project 14 59824615 59921185 + MGP_BALBcJ_P0039905 Adra1a protein_coding protein_coding MGP_BALBcJ_T0099445.1 MGP_BALBcJ_G0037481.1 mouse_genomes_project 14 114531553 114531637 + Gm25781 snRNA snRNA MGP_BALBcJ_T0099399.1 MGP_BALBcJ_G0037435.1 mouse_genomes_project 14 14379226 14379371 + Gm23502 snRNA snRNA MGP_BALBcJ_T0039116.1 MGP_BALBcJ_G0021185.1 mouse_genomes_project 14 42291674 42399246 - MGP_BALBcJ_P0039116 3632451O06Rik protein_coding protein_coding MGP_BALBcJ_T0039117.1 MGP_BALBcJ_G0021185.1 mouse_genomes_project 14 42291782 42399234 - MGP_BALBcJ_P0039117 3632451O06Rik protein_coding protein_coding MGP_BALBcJ_T0039118.1 MGP_BALBcJ_G0021185.1 mouse_genomes_project 14 42342031 42364555 - 3632451O06Rik protein_coding processed_transcript MGP_BALBcJ_T0039040.1 MGP_BALBcJ_G0021172.1 mouse_genomes_project 14 39928089 39943829 + MGP_BALBcJ_P0039040 Lgals3 protein_coding protein_coding MGP_BALBcJ_T0039041.1 MGP_BALBcJ_G0021172.1 mouse_genomes_project 14 39935689 39949549 + MGP_BALBcJ_P0039041 Lgals3 protein_coding protein_coding MGP_BALBcJ_T0039042.1 MGP_BALBcJ_G0021172.1 mouse_genomes_project 14 39935775 39949185 + MGP_BALBcJ_P0039042 Lgals3 protein_coding protein_coding MGP_BALBcJ_T0039043.1 MGP_BALBcJ_G0021172.1 mouse_genomes_project 14 39935792 39943728 + MGP_BALBcJ_P0039043 Lgals3 protein_coding protein_coding MGP_BALBcJ_T0039044.1 MGP_BALBcJ_G0021172.1 mouse_genomes_project 14 39935850 39949180 + MGP_BALBcJ_P0039044 Lgals3 protein_coding protein_coding MGP_BALBcJ_T0002601.1 MGP_BALBcJ_G0002496.1 mouse_genomes_project 14 45704608 45705094 + MGP_BALBcJ_P0002601 TR_V_gene TR_V_gene MGP_BALBcJ_T0002505.1 MGP_BALBcJ_G0002410.1 mouse_genomes_project 14 47157458 47157520 + MGP_BALBcJ_P0002505 Traj49 TR_J_gene TR_J_gene MGP_BALBcJ_T0002506.1 MGP_BALBcJ_G0002410.1 mouse_genomes_project 14 47157458 47157517 + Traj49 TR_J_gene processed_transcript MGP_BALBcJ_T0040028.1 MGP_BALBcJ_G0021514.1 mouse_genomes_project 14 63686739 63793248 - MGP_BALBcJ_P0040028 Xpo7 protein_coding protein_coding MGP_BALBcJ_T0040029.1 MGP_BALBcJ_G0021514.1 mouse_genomes_project 14 63686739 63793248 - MGP_BALBcJ_P0040029 Xpo7 protein_coding protein_coding MGP_BALBcJ_T0039485.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48501067 48508078 + MGP_BALBcJ_P0039485 Cpne6 protein_coding protein_coding MGP_BALBcJ_T0039486.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48501070 48508078 + MGP_BALBcJ_P0039486 Cpne6 protein_coding protein_coding MGP_BALBcJ_T0039487.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48501097 48508077 + Cpne6 protein_coding retained_intron MGP_BALBcJ_T0039488.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48501219 48504339 + MGP_BALBcJ_P0039488 Cpne6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039489.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48501933 48508078 + Cpne6 protein_coding retained_intron MGP_BALBcJ_T0039490.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48501982 48508078 + MGP_BALBcJ_P0039490 Cpne6 protein_coding protein_coding MGP_BALBcJ_T0039491.1 MGP_BALBcJ_G0021308.1 mouse_genomes_project 14 48502607 48508076 + MGP_BALBcJ_P0039491 Cpne6 protein_coding protein_coding MGP_BALBcJ_T0038865.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25664111 25667092 + Arhgap22 protein_coding processed_transcript MGP_BALBcJ_T0038866.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25666908 25817268 + MGP_BALBcJ_P0038866 Arhgap22 protein_coding protein_coding MGP_BALBcJ_T0038867.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25696478 25718806 + Arhgap22 protein_coding processed_transcript MGP_BALBcJ_T0038868.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25753574 25817266 + Arhgap22 protein_coding processed_transcript MGP_BALBcJ_T0038869.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25767041 25817268 + MGP_BALBcJ_P0038869 Arhgap22 protein_coding protein_coding MGP_BALBcJ_T0038870.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25798650 25809913 + Arhgap22 protein_coding processed_transcript MGP_BALBcJ_T0038871.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25809634 25811814 + Arhgap22 protein_coding processed_transcript MGP_BALBcJ_T0038872.1 MGP_BALBcJ_G0021107.1 mouse_genomes_project 14 25809713 25810663 + Arhgap22 protein_coding processed_transcript MGP_BALBcJ_T0039762.1 MGP_BALBcJ_G0021402.1 mouse_genomes_project 14 54330377 54369930 - MGP_BALBcJ_P0039762 Sgcg protein_coding protein_coding MGP_BALBcJ_T0039763.1 MGP_BALBcJ_G0021402.1 mouse_genomes_project 14 54330762 54369864 - MGP_BALBcJ_P0039763 Sgcg protein_coding protein_coding MGP_BALBcJ_T0039764.1 MGP_BALBcJ_G0021402.1 mouse_genomes_project 14 54332134 54341771 - MGP_BALBcJ_P0039764 Sgcg protein_coding protein_coding MGP_BALBcJ_T0039731.1 MGP_BALBcJ_G0021392.1 mouse_genomes_project 14 52785599 53307656 - MGP_BALBcJ_P0039731 Atp8a2 protein_coding protein_coding MGP_BALBcJ_T0039732.1 MGP_BALBcJ_G0021392.1 mouse_genomes_project 14 53157624 53217215 - MGP_BALBcJ_P0039732 Atp8a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039733.1 MGP_BALBcJ_G0021392.1 mouse_genomes_project 14 53171805 53327708 - MGP_BALBcJ_P0039733 Atp8a2 protein_coding protein_coding MGP_BALBcJ_T0039734.1 MGP_BALBcJ_G0021392.1 mouse_genomes_project 14 53216914 53307808 - MGP_BALBcJ_P0039734 Atp8a2 protein_coding protein_coding MGP_BALBcJ_T0039735.1 MGP_BALBcJ_G0021392.1 mouse_genomes_project 14 53216973 53217756 - MGP_BALBcJ_P0039735 Atp8a2 protein_coding protein_coding MGP_BALBcJ_T0039126.1 MGP_BALBcJ_G0021193.1 mouse_genomes_project 14 42814786 42815758 - MGP_BALBcJ_P0039126 Olfr729 protein_coding protein_coding MGP_BALBcJ_T0006667.1 MGP_BALBcJ_G0005509.1 mouse_genomes_project 14 39355343 39359479 - Gm10101 lincRNA lincRNA MGP_BALBcJ_T0006668.1 MGP_BALBcJ_G0005509.1 mouse_genomes_project 14 39355348 39359479 - Gm10101 lincRNA lincRNA MGP_BALBcJ_T0009982.1 MGP_BALBcJ_G0008107.1 mouse_genomes_project 14 63329968 63330054 - Gm44340 miRNA miRNA MGP_BALBcJ_T0000898.1 MGP_BALBcJ_G0000829.1 mouse_genomes_project 14 14496093 14516391 + TEC TEC MGP_BALBcJ_T0012993.1 MGP_BALBcJ_G0011090.1 mouse_genomes_project 14 53277630 53277978 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040181.1 MGP_BALBcJ_G0021565.1 mouse_genomes_project 14 72717866 72759912 + MGP_BALBcJ_P0040181 Sugt1 protein_coding protein_coding MGP_BALBcJ_T0040011.1 MGP_BALBcJ_G0021504.1 mouse_genomes_project 14 63505977 63552547 - MGP_BALBcJ_P0040011 Bmp1 protein_coding protein_coding MGP_BALBcJ_T0040012.1 MGP_BALBcJ_G0021504.1 mouse_genomes_project 14 63519215 63552324 - MGP_BALBcJ_P0040012 Bmp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0006690.1 MGP_BALBcJ_G0005525.1 mouse_genomes_project 14 55325675 55328113 - Gm26969 lincRNA lincRNA MGP_BALBcJ_T0039111.1 MGP_BALBcJ_G0021184.1 mouse_genomes_project 14 41908011 42144551 - MGP_BALBcJ_P0039111 Slc35f4 protein_coding protein_coding MGP_BALBcJ_T0039112.1 MGP_BALBcJ_G0021184.1 mouse_genomes_project 14 41908011 42144530 - MGP_BALBcJ_P0039112 Slc35f4 protein_coding protein_coding MGP_BALBcJ_T0039113.1 MGP_BALBcJ_G0021184.1 mouse_genomes_project 14 41912772 41923744 - Slc35f4 protein_coding processed_transcript MGP_BALBcJ_T0039114.1 MGP_BALBcJ_G0021184.1 mouse_genomes_project 14 41921624 42144711 - MGP_BALBcJ_P0039114 Slc35f4 protein_coding protein_coding MGP_BALBcJ_T0039115.1 MGP_BALBcJ_G0021184.1 mouse_genomes_project 14 41926593 42144518 - Slc35f4 protein_coding retained_intron MGP_BALBcJ_T0002482.1 MGP_BALBcJ_G0002391.1 mouse_genomes_project 14 47128080 47134023 + MGP_BALBcJ_P0002482 Trdc TR_C_gene TR_C_gene MGP_BALBcJ_T0039587.1 MGP_BALBcJ_G0021324.1 mouse_genomes_project 14 48671028 48680637 - MGP_BALBcJ_P0039587 Nedd8 protein_coding protein_coding MGP_BALBcJ_T0039588.1 MGP_BALBcJ_G0021324.1 mouse_genomes_project 14 48671030 48680670 - MGP_BALBcJ_P0039588 Nedd8 protein_coding protein_coding MGP_BALBcJ_T0039583.1 MGP_BALBcJ_G0021322.1 mouse_genomes_project 14 48658993 48661351 + MGP_BALBcJ_P0039583 Tssk4 protein_coding protein_coding MGP_BALBcJ_T0039584.1 MGP_BALBcJ_G0021322.1 mouse_genomes_project 14 48658995 48661351 + MGP_BALBcJ_P0039584 Tssk4 protein_coding protein_coding MGP_BALBcJ_T0039585.1 MGP_BALBcJ_G0021322.1 mouse_genomes_project 14 48659160 48661260 + MGP_BALBcJ_P0039585 Tssk4 protein_coding unknown_likely_coding MGP_BALBcJ_T0013021.1 MGP_BALBcJ_G0011118.1 mouse_genomes_project 14 117482683 117482897 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009980.1 MGP_BALBcJ_G0008105.1 mouse_genomes_project 14 61098992 61099102 - Mir6539 miRNA miRNA MGP_BALBcJ_T0039795.1 MGP_BALBcJ_G0021420.1 mouse_genomes_project 14 56193417 56195037 + MGP_BALBcJ_P0039795 Defb42 protein_coding protein_coding MGP_BALBcJ_T0039796.1 MGP_BALBcJ_G0021420.1 mouse_genomes_project 14 56193455 56205125 + Defb42 protein_coding processed_transcript MGP_BALBcJ_T0039797.1 MGP_BALBcJ_G0021420.1 mouse_genomes_project 14 56193520 56194985 + MGP_BALBcJ_P0039797 Defb42 protein_coding protein_coding MGP_BALBcJ_T0039798.1 MGP_BALBcJ_G0021420.1 mouse_genomes_project 14 56194655 56195002 + MGP_BALBcJ_P0039798 Defb42 protein_coding protein_coding MGP_BALBcJ_T0039799.1 MGP_BALBcJ_G0021420.1 mouse_genomes_project 14 56202053 56203916 + Defb42 protein_coding processed_transcript MGP_BALBcJ_T0039218.1 MGP_BALBcJ_G0021243.1 mouse_genomes_project 14 44827658 44830801 + Slc39a2 protein_coding retained_intron MGP_BALBcJ_T0039219.1 MGP_BALBcJ_G0021243.1 mouse_genomes_project 14 44828609 44831740 + MGP_BALBcJ_P0039219 Slc39a2 protein_coding protein_coding MGP_BALBcJ_T0039220.1 MGP_BALBcJ_G0021243.1 mouse_genomes_project 14 44828656 44830794 + MGP_BALBcJ_P0039220 Slc39a2 protein_coding protein_coding MGP_BALBcJ_T0039542.1 MGP_BALBcJ_G0021317.1 mouse_genomes_project 14 48585511 48597523 + MGP_BALBcJ_P0039542 Rnf31 protein_coding protein_coding MGP_BALBcJ_T0039543.1 MGP_BALBcJ_G0021317.1 mouse_genomes_project 14 48585547 48591486 + MGP_BALBcJ_P0039543 Rnf31 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039544.1 MGP_BALBcJ_G0021317.1 mouse_genomes_project 14 48586078 48597494 + MGP_BALBcJ_P0039544 Rnf31 protein_coding protein_coding MGP_BALBcJ_T0039545.1 MGP_BALBcJ_G0021317.1 mouse_genomes_project 14 48586270 48586778 + Rnf31 protein_coding retained_intron MGP_BALBcJ_T0039546.1 MGP_BALBcJ_G0021317.1 mouse_genomes_project 14 48592214 48592780 + Rnf31 protein_coding retained_intron MGP_BALBcJ_T0017378.1 MGP_BALBcJ_G0015217.1 mouse_genomes_project 14 93798081 93831273 + 4930517O19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017379.1 MGP_BALBcJ_G0015217.1 mouse_genomes_project 14 93798128 93832208 + 4930517O19Rik processed_transcript processed_transcript MGP_BALBcJ_T0017380.1 MGP_BALBcJ_G0015217.1 mouse_genomes_project 14 93798128 93830783 + 4930517O19Rik processed_transcript processed_transcript MGP_BALBcJ_T0039139.1 MGP_BALBcJ_G0021203.1 mouse_genomes_project 14 43125166 43126209 + MGP_BALBcJ_P0039139 protein_coding protein_coding MGP_BALBcJ_T0002698.1 MGP_BALBcJ_G0002574.1 mouse_genomes_project 14 45978481 45979053 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0038889.1 MGP_BALBcJ_G0021116.1 mouse_genomes_project 14 26509632 26562466 - MGP_BALBcJ_P0038889 A630023A22Rik protein_coding protein_coding MGP_BALBcJ_T0003519.1 MGP_BALBcJ_G0003201.1 mouse_genomes_project 14 31710574 31741266 + Gm20642 antisense antisense MGP_BALBcJ_T0039772.1 MGP_BALBcJ_G0021409.1 mouse_genomes_project 14 55399213 55416515 - MGP_BALBcJ_P0039772 Dleu7 protein_coding protein_coding MGP_BALBcJ_T0000913.1 MGP_BALBcJ_G0000844.1 mouse_genomes_project 14 62442377 62445938 - TEC TEC MGP_BALBcJ_T0039688.1 MGP_BALBcJ_G0021376.1 mouse_genomes_project 14 50920698 50940290 - MGP_BALBcJ_P0039688 Ska3 protein_coding protein_coding MGP_BALBcJ_T0039672.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50757925 50858978 - MGP_BALBcJ_P0039672 Lats2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039675.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50803346 50858998 - MGP_BALBcJ_P0039675 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039676.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50804782 50858996 - MGP_BALBcJ_P0039676 Lats2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039677.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50807545 50858980 - MGP_BALBcJ_P0039677 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039678.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50811228 50813759 - MGP_BALBcJ_P0039678 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039679.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50816703 50871263 - MGP_BALBcJ_P0039679 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039680.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50835842 50847214 - MGP_BALBcJ_P0039680 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039681.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50835842 50847214 - MGP_BALBcJ_P0039681 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039682.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50847093 50857529 - MGP_BALBcJ_P0039682 Lats2 protein_coding protein_coding MGP_BALBcJ_T0039683.1 MGP_BALBcJ_G0021374.1 mouse_genomes_project 14 50847166 50859453 - Lats2 protein_coding processed_transcript MGP_BALBcJ_T0039009.1 MGP_BALBcJ_G0021163.1 mouse_genomes_project 14 38916651 38924054 - MGP_BALBcJ_P0039009 Bmp4 protein_coding protein_coding MGP_BALBcJ_T0039010.1 MGP_BALBcJ_G0021163.1 mouse_genomes_project 14 38916837 38923935 - MGP_BALBcJ_P0039010 Bmp4 protein_coding protein_coding MGP_BALBcJ_T0039011.1 MGP_BALBcJ_G0021163.1 mouse_genomes_project 14 38920390 38923920 - Bmp4 protein_coding retained_intron MGP_BALBcJ_T0012963.1 MGP_BALBcJ_G0011060.1 mouse_genomes_project 14 18512827 18514049 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012952.1 MGP_BALBcJ_G0011049.1 mouse_genomes_project 14 5184559 5184895 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039194.1 MGP_BALBcJ_G0021235.1 mouse_genomes_project 14 43986517 43987080 + MGP_BALBcJ_P0039194 Ear14 protein_coding protein_coding MGP_BALBcJ_T0101630.1 MGP_BALBcJ_G0039639.1 mouse_genomes_project 14 48037071 48041504 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101631.1 MGP_BALBcJ_G0039639.1 mouse_genomes_project 14 48040348 48041327 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0098512.1 MGP_BALBcJ_G0036566.1 mouse_genomes_project 14 103850120 103850231 + n-R5s50 rRNA rRNA MGP_BALBcJ_T0040021.1 MGP_BALBcJ_G0021509.1 mouse_genomes_project 14 63610063 63614787 + MGP_BALBcJ_P0040021 Nudt18 protein_coding protein_coding MGP_BALBcJ_T0039195.1 MGP_BALBcJ_G0021236.1 mouse_genomes_project 14 44227714 44233358 + MGP_BALBcJ_P0039195 protein_coding protein_coding MGP_BALBcJ_T0039377.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47490487 47501769 - MGP_BALBcJ_P0039377 Prmt5 protein_coding protein_coding MGP_BALBcJ_T0039378.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47494262 47496718 - MGP_BALBcJ_P0039378 Prmt5 protein_coding protein_coding MGP_BALBcJ_T0039379.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47494467 47501679 - MGP_BALBcJ_P0039379 Prmt5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039380.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47496634 47501637 - Prmt5 protein_coding retained_intron MGP_BALBcJ_T0039381.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47497199 47501714 - Prmt5 protein_coding retained_intron MGP_BALBcJ_T0039382.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47497852 47499902 - Prmt5 protein_coding processed_transcript MGP_BALBcJ_T0039383.1 MGP_BALBcJ_G0021275.1 mouse_genomes_project 14 47500394 47501605 - Prmt5 protein_coding processed_transcript MGP_BALBcJ_T0039188.1 MGP_BALBcJ_G0021230.1 mouse_genomes_project 14 43830064 43840882 + MGP_BALBcJ_P0039188 protein_coding protein_coding MGP_BALBcJ_T0039189.1 MGP_BALBcJ_G0021230.1 mouse_genomes_project 14 43840280 43840718 + MGP_BALBcJ_P0039189 protein_coding protein_coding MGP_BALBcJ_T0039441.1 MGP_BALBcJ_G0021293.1 mouse_genomes_project 14 47902455 47908541 - MGP_BALBcJ_P0039441 Slc22a17 protein_coding protein_coding MGP_BALBcJ_T0102241.1 MGP_BALBcJ_G0040057.1 mouse_genomes_project 14 43909377 43909839 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0040345.1 MGP_BALBcJ_G0021625.1 mouse_genomes_project 14 114644502 114682354 + MGP_BALBcJ_P0040345 Ipo5 protein_coding protein_coding MGP_BALBcJ_T0002518.1 MGP_BALBcJ_G0002421.1 mouse_genomes_project 14 47169286 47169348 + MGP_BALBcJ_P0002518 Traj38 TR_J_gene TR_J_gene MGP_BALBcJ_T0040370.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116315888 116364355 + Pcca protein_coding retained_intron MGP_BALBcJ_T0040371.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116315895 116396827 + MGP_BALBcJ_P0040371 Pcca protein_coding protein_coding MGP_BALBcJ_T0040372.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116315903 116679499 + MGP_BALBcJ_P0040372 Pcca protein_coding protein_coding MGP_BALBcJ_T0040373.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116315909 116428235 + MGP_BALBcJ_P0040373 Pcca protein_coding protein_coding MGP_BALBcJ_T0040374.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116364061 116679383 + MGP_BALBcJ_P0040374 Pcca protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040375.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116383212 116443342 + Pcca protein_coding processed_transcript MGP_BALBcJ_T0040376.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116491986 116516531 + MGP_BALBcJ_P0040376 Pcca protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040377.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116492012 116679380 + MGP_BALBcJ_P0040377 Pcca protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040378.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116492076 116604519 + Pcca protein_coding processed_transcript MGP_BALBcJ_T0040379.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116516435 116604865 + Pcca protein_coding retained_intron MGP_BALBcJ_T0040380.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116576407 116679375 + MGP_BALBcJ_P0040380 Pcca protein_coding protein_coding MGP_BALBcJ_T0040382.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116665488 116680655 + Pcca protein_coding processed_transcript MGP_BALBcJ_T0040383.1 MGP_BALBcJ_G0021640.1 mouse_genomes_project 14 116676457 116679383 + Pcca protein_coding retained_intron MGP_BALBcJ_T0006718.1 MGP_BALBcJ_G0005546.1 mouse_genomes_project 14 114113069 114118619 - Gm26679 lincRNA lincRNA MGP_BALBcJ_T0003530.1 MGP_BALBcJ_G0003211.1 mouse_genomes_project 14 47637452 47641557 + 4930579G18Rik antisense antisense MGP_BALBcJ_T0039594.1 MGP_BALBcJ_G0021328.1 mouse_genomes_project 14 48735395 48741721 - MGP_BALBcJ_P0039594 Rabggta protein_coding protein_coding MGP_BALBcJ_T0039595.1 MGP_BALBcJ_G0021328.1 mouse_genomes_project 14 48735399 48741699 - MGP_BALBcJ_P0039595 Rabggta protein_coding protein_coding MGP_BALBcJ_T0039596.1 MGP_BALBcJ_G0021328.1 mouse_genomes_project 14 48735847 48741780 - MGP_BALBcJ_P0039596 Rabggta protein_coding protein_coding MGP_BALBcJ_T0002574.1 MGP_BALBcJ_G0002475.1 mouse_genomes_project 14 47207866 47207895 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0102246.1 MGP_BALBcJ_G0040062.1 mouse_genomes_project 14 54288593 54312713 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0039940.1 MGP_BALBcJ_G0021476.1 mouse_genomes_project 14 61797850 61817261 - MGP_BALBcJ_P0039940 Adamdec1 protein_coding protein_coding MGP_BALBcJ_T0039907.1 MGP_BALBcJ_G0021463.1 mouse_genomes_project 14 60014677 60081866 - MGP_BALBcJ_P0039907 Dpysl2 protein_coding protein_coding MGP_BALBcJ_T0099397.1 MGP_BALBcJ_G0037433.1 mouse_genomes_project 14 13261678 13261785 + Gm25328 snRNA snRNA MGP_BALBcJ_T0100685.1 MGP_BALBcJ_G0038721.1 mouse_genomes_project 14 44995546 44995616 + Gm22354 snoRNA snoRNA MGP_BALBcJ_T0102242.1 MGP_BALBcJ_G0040058.1 mouse_genomes_project 14 43909378 43909841 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0039726.1 MGP_BALBcJ_G0021390.1 mouse_genomes_project 14 52699291 52734383 - MGP_BALBcJ_P0039726 Cdadc1 protein_coding protein_coding MGP_BALBcJ_T0039727.1 MGP_BALBcJ_G0021390.1 mouse_genomes_project 14 52699291 52734383 - MGP_BALBcJ_P0039727 Cdadc1 protein_coding protein_coding MGP_BALBcJ_T0039728.1 MGP_BALBcJ_G0021390.1 mouse_genomes_project 14 52702889 52734383 - MGP_BALBcJ_P0039728 Cdadc1 protein_coding protein_coding MGP_BALBcJ_T0039729.1 MGP_BALBcJ_G0021390.1 mouse_genomes_project 14 52706127 52734383 - MGP_BALBcJ_P0039729 Cdadc1 protein_coding protein_coding MGP_BALBcJ_T0002527.1 MGP_BALBcJ_G0002430.1 mouse_genomes_project 14 47180244 47180309 + MGP_BALBcJ_P0002527 Traj28 TR_J_gene TR_J_gene MGP_BALBcJ_T0099437.1 MGP_BALBcJ_G0037473.1 mouse_genomes_project 14 98806089 98806196 + Gm22290 snRNA snRNA MGP_BALBcJ_T0002516.1 MGP_BALBcJ_G0002419.1 mouse_genomes_project 14 47166635 47166696 + MGP_BALBcJ_P0002516 Traj40 TR_J_gene TR_J_gene MGP_BALBcJ_T0102243.1 MGP_BALBcJ_G0040059.1 mouse_genomes_project 14 44703520 44703970 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100725.1 MGP_BALBcJ_G0038761.1 mouse_genomes_project 14 112000936 112001064 + Gm23669 snoRNA snoRNA MGP_BALBcJ_T0002604.1 MGP_BALBcJ_G0002499.1 mouse_genomes_project 14 45803304 45803920 + MGP_BALBcJ_P0002604 TR_V_gene TR_V_gene MGP_BALBcJ_T0002605.1 MGP_BALBcJ_G0002499.1 mouse_genomes_project 14 45803348 45803920 + MGP_BALBcJ_P0002605 TR_V_gene TR_V_gene MGP_BALBcJ_T0040023.1 MGP_BALBcJ_G0021511.1 mouse_genomes_project 14 63634358 63662125 - MGP_BALBcJ_P0040023 Dmtn protein_coding protein_coding MGP_BALBcJ_T0040024.1 MGP_BALBcJ_G0021511.1 mouse_genomes_project 14 63634359 63659041 - MGP_BALBcJ_P0040024 Dmtn protein_coding protein_coding MGP_BALBcJ_T0040025.1 MGP_BALBcJ_G0021511.1 mouse_genomes_project 14 63636919 63660975 - MGP_BALBcJ_P0040025 Dmtn protein_coding unknown_likely_coding MGP_BALBcJ_T0038919.1 MGP_BALBcJ_G0021130.1 mouse_genomes_project 14 27057058 27066590 - MGP_BALBcJ_P0038919 Opn4 protein_coding protein_coding MGP_BALBcJ_T0038920.1 MGP_BALBcJ_G0021130.1 mouse_genomes_project 14 27058783 27066590 - MGP_BALBcJ_P0038920 Opn4 protein_coding protein_coding MGP_BALBcJ_T0040202.1 MGP_BALBcJ_G0021573.1 mouse_genomes_project 14 81754367 81761011 - MGP_BALBcJ_P0040202 Pcdh20 protein_coding protein_coding MGP_BALBcJ_T0040203.1 MGP_BALBcJ_G0021573.1 mouse_genomes_project 14 81756484 81760961 - MGP_BALBcJ_P0040203 Pcdh20 protein_coding protein_coding MGP_BALBcJ_T0040146.1 MGP_BALBcJ_G0021546.1 mouse_genomes_project 14 69614501 69638726 - MGP_BALBcJ_P0040146 Serp2 protein_coding protein_coding MGP_BALBcJ_T0040166.1 MGP_BALBcJ_G0021557.1 mouse_genomes_project 14 71976085 72314044 + MGP_BALBcJ_P0040166 Vwa8 protein_coding protein_coding MGP_BALBcJ_T0039349.1 MGP_BALBcJ_G0021268.1 mouse_genomes_project 14 47274165 47275196 - MGP_BALBcJ_P0039349 Olfr49 protein_coding protein_coding MGP_BALBcJ_T0038469.1 MGP_BALBcJ_G0021009.1 mouse_genomes_project 14 14414988 14416812 - MGP_BALBcJ_P0038469 Comtd1 protein_coding protein_coding MGP_BALBcJ_T0038470.1 MGP_BALBcJ_G0021009.1 mouse_genomes_project 14 14415117 14416834 - Comtd1 protein_coding retained_intron MGP_BALBcJ_T0038471.1 MGP_BALBcJ_G0021009.1 mouse_genomes_project 14 14415123 14415749 - Comtd1 protein_coding retained_intron MGP_BALBcJ_T0039621.1 MGP_BALBcJ_G0021345.1 mouse_genomes_project 14 49131619 49134670 - MGP_BALBcJ_P0039621 Mcpt8 protein_coding protein_coding MGP_BALBcJ_T0017342.1 MGP_BALBcJ_G0015206.1 mouse_genomes_project 14 37362726 37463613 + processed_transcript processed_transcript MGP_BALBcJ_T0017343.1 MGP_BALBcJ_G0015206.1 mouse_genomes_project 14 37363009 37480146 + processed_transcript processed_transcript MGP_BALBcJ_T0003563.1 MGP_BALBcJ_G0003235.1 mouse_genomes_project 14 72909783 72912619 + Gm9748 antisense antisense MGP_BALBcJ_T0003564.1 MGP_BALBcJ_G0003235.1 mouse_genomes_project 14 72909857 72912567 + Gm9748 antisense antisense MGP_BALBcJ_T0002567.1 MGP_BALBcJ_G0002468.1 mouse_genomes_project 14 47141079 47141133 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0039730.1 MGP_BALBcJ_G0021391.1 mouse_genomes_project 14 52763062 52769439 + MGP_BALBcJ_P0039730 Shisa2 protein_coding protein_coding MGP_BALBcJ_T0039226.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911203 44913998 + MGP_BALBcJ_P0039226 Arhgef40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039227.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911317 44931832 + MGP_BALBcJ_P0039227 Arhgef40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039228.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911322 44932428 + MGP_BALBcJ_P0039228 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039229.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911328 44917220 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039230.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911348 44931799 + MGP_BALBcJ_P0039230 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039231.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911370 44931810 + MGP_BALBcJ_P0039231 Arhgef40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039232.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911393 44931804 + MGP_BALBcJ_P0039232 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039233.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911394 44931800 + MGP_BALBcJ_P0039233 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039234.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911396 44912601 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039235.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911399 44915681 + MGP_BALBcJ_P0039235 Arhgef40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039236.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911415 44931800 + MGP_BALBcJ_P0039236 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039237.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911495 44918210 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039238.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44911500 44915333 + MGP_BALBcJ_P0039238 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039239.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44918321 44920562 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039240.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44920558 44923516 + MGP_BALBcJ_P0039240 Arhgef40 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039241.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44921736 44922704 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039242.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44924106 44931806 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039243.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44928512 44931800 + MGP_BALBcJ_P0039243 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039244.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44928540 44930139 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039245.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44928587 44931803 + MGP_BALBcJ_P0039245 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039246.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44929746 44931197 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039247.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44930257 44931718 + MGP_BALBcJ_P0039247 Arhgef40 protein_coding protein_coding MGP_BALBcJ_T0039248.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44930663 44931547 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039249.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44930677 44931489 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0039250.1 MGP_BALBcJ_G0021247.1 mouse_genomes_project 14 44930764 44931488 + Arhgef40 protein_coding retained_intron MGP_BALBcJ_T0012998.1 MGP_BALBcJ_G0011095.1 mouse_genomes_project 14 64848509 64849494 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039421.1 MGP_BALBcJ_G0021288.1 mouse_genomes_project 14 47845750 47853536 - MGP_BALBcJ_P0039421 Homez protein_coding protein_coding MGP_BALBcJ_T0039422.1 MGP_BALBcJ_G0021288.1 mouse_genomes_project 14 47846805 47856837 - MGP_BALBcJ_P0039422 Homez protein_coding protein_coding MGP_BALBcJ_T0039423.1 MGP_BALBcJ_G0021288.1 mouse_genomes_project 14 47848591 47850233 - MGP_BALBcJ_P0039423 Homez protein_coding protein_coding MGP_BALBcJ_T0039424.1 MGP_BALBcJ_G0021288.1 mouse_genomes_project 14 47850944 47863465 - MGP_BALBcJ_P0039424 Homez protein_coding protein_coding MGP_BALBcJ_T0102245.1 MGP_BALBcJ_G0040061.1 mouse_genomes_project 14 44778801 44779156 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0038948.1 MGP_BALBcJ_G0021141.1 mouse_genomes_project 14 29588937 29603633 - MGP_BALBcJ_P0038948 Ghitm protein_coding protein_coding MGP_BALBcJ_T0038949.1 MGP_BALBcJ_G0021141.1 mouse_genomes_project 14 29588937 29603816 - MGP_BALBcJ_P0038949 Ghitm protein_coding protein_coding MGP_BALBcJ_T0038274.1 MGP_BALBcJ_G0020949.1 mouse_genomes_project 14 4594747 4613940 + MGP_BALBcJ_P0038274 3830406C13Rik protein_coding protein_coding MGP_BALBcJ_T0038275.1 MGP_BALBcJ_G0020949.1 mouse_genomes_project 14 4594747 4613940 + MGP_BALBcJ_P0038275 3830406C13Rik protein_coding protein_coding MGP_BALBcJ_T0039961.1 MGP_BALBcJ_G0021487.1 mouse_genomes_project 14 62624314 62711186 + MGP_BALBcJ_P0039961 Loxl2 protein_coding protein_coding MGP_BALBcJ_T0039962.1 MGP_BALBcJ_G0021487.1 mouse_genomes_project 14 62624724 62709053 + MGP_BALBcJ_P0039962 Loxl2 protein_coding protein_coding MGP_BALBcJ_T0038908.1 MGP_BALBcJ_G0021127.1 mouse_genomes_project 14 26874806 26967283 - MGP_BALBcJ_P0038908 Bmpr1a protein_coding protein_coding MGP_BALBcJ_T0038909.1 MGP_BALBcJ_G0021127.1 mouse_genomes_project 14 26878558 26924721 - MGP_BALBcJ_P0038909 Bmpr1a protein_coding protein_coding MGP_BALBcJ_T0038910.1 MGP_BALBcJ_G0021127.1 mouse_genomes_project 14 26898525 26968384 - MGP_BALBcJ_P0038910 Bmpr1a protein_coding protein_coding MGP_BALBcJ_T0038911.1 MGP_BALBcJ_G0021127.1 mouse_genomes_project 14 26907928 26967124 - MGP_BALBcJ_P0038911 Bmpr1a protein_coding protein_coding MGP_BALBcJ_T0038751.1 MGP_BALBcJ_G0021076.1 mouse_genomes_project 14 23615943 23629832 - MGP_BALBcJ_P0038751 Phf7 protein_coding protein_coding MGP_BALBcJ_T0006715.1 MGP_BALBcJ_G0005543.1 mouse_genomes_project 14 112066940 112099304 + 1700044C05Rik lincRNA lincRNA MGP_BALBcJ_T0038750.1 MGP_BALBcJ_G0021075.1 mouse_genomes_project 14 23593810 23608598 + MGP_BALBcJ_P0038750 Sema3g protein_coding protein_coding MGP_BALBcJ_T0099398.1 MGP_BALBcJ_G0037434.1 mouse_genomes_project 14 14013895 14013987 + Gm25864 snRNA snRNA MGP_BALBcJ_T0009981.1 MGP_BALBcJ_G0008106.1 mouse_genomes_project 14 62707606 62707679 + Mir6950 miRNA miRNA MGP_BALBcJ_T0038955.1 MGP_BALBcJ_G0021144.1 mouse_genomes_project 14 33409275 33469643 - MGP_BALBcJ_P0038955 Tspan14 protein_coding protein_coding MGP_BALBcJ_T0098509.1 MGP_BALBcJ_G0036563.1 mouse_genomes_project 14 71413210 71413325 - Gm26197 rRNA rRNA MGP_BALBcJ_T0040308.1 MGP_BALBcJ_G0021610.1 mouse_genomes_project 14 110611561 111675284 + MGP_BALBcJ_P0040308 Gpc6 protein_coding protein_coding MGP_BALBcJ_T0040309.1 MGP_BALBcJ_G0021610.1 mouse_genomes_project 14 110611579 111323359 + Gpc6 protein_coding retained_intron MGP_BALBcJ_T0040310.1 MGP_BALBcJ_G0021610.1 mouse_genomes_project 14 110611694 111672033 + MGP_BALBcJ_P0040310 Gpc6 protein_coding protein_coding MGP_BALBcJ_T0040311.1 MGP_BALBcJ_G0021610.1 mouse_genomes_project 14 110611795 111670895 + MGP_BALBcJ_P0040311 Gpc6 protein_coding protein_coding MGP_BALBcJ_T0039725.1 MGP_BALBcJ_G0021389.1 mouse_genomes_project 14 52576390 52686733 + MGP_BALBcJ_P0039725 Cab39l protein_coding protein_coding MGP_BALBcJ_T0100702.1 MGP_BALBcJ_G0038738.1 mouse_genomes_project 14 69030611 69030745 - Gm25517 snoRNA snoRNA MGP_BALBcJ_T0006662.1 MGP_BALBcJ_G0005504.1 mouse_genomes_project 14 38206492 38208367 - A530076I17Rik lincRNA lincRNA MGP_BALBcJ_T0038426.1 MGP_BALBcJ_G0021003.1 mouse_genomes_project 14 13613832 14011990 + MGP_BALBcJ_P0038426 Adk protein_coding protein_coding MGP_BALBcJ_T0038427.1 MGP_BALBcJ_G0021003.1 mouse_genomes_project 14 13637336 14011995 + MGP_BALBcJ_P0038427 Adk protein_coding unknown_likely_coding MGP_BALBcJ_T0039183.1 MGP_BALBcJ_G0021227.1 mouse_genomes_project 14 43795766 43796898 - MGP_BALBcJ_P0039183 Olfr750 protein_coding protein_coding MGP_BALBcJ_T0006643.1 MGP_BALBcJ_G0005492.1 mouse_genomes_project 14 17233860 17234583 + 4930428N03Rik lincRNA lincRNA MGP_BALBcJ_T0006644.1 MGP_BALBcJ_G0005492.1 mouse_genomes_project 14 17233881 17242013 + 4930428N03Rik lincRNA lincRNA MGP_BALBcJ_T0100707.1 MGP_BALBcJ_G0038743.1 mouse_genomes_project 14 83787488 83787619 + Gm25495 snoRNA snoRNA MGP_BALBcJ_T0039146.1 MGP_BALBcJ_G0021210.1 mouse_genomes_project 14 43439297 43440242 + MGP_BALBcJ_P0039146 protein_coding protein_coding MGP_BALBcJ_T0039883.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59332244 59399391 - MGP_BALBcJ_P0039883 Ptk2b protein_coding unknown_likely_coding MGP_BALBcJ_T0039884.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59332246 59355338 - MGP_BALBcJ_P0039884 Ptk2b protein_coding protein_coding MGP_BALBcJ_T0039885.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59332246 59469255 - MGP_BALBcJ_P0039885 Ptk2b protein_coding protein_coding MGP_BALBcJ_T0039886.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59332251 59339649 - Ptk2b protein_coding retained_intron MGP_BALBcJ_T0039887.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59332828 59469185 - MGP_BALBcJ_P0039887 Ptk2b protein_coding protein_coding MGP_BALBcJ_T0039888.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59335254 59342873 - Ptk2b protein_coding retained_intron MGP_BALBcJ_T0039889.1 MGP_BALBcJ_G0021458.1 mouse_genomes_project 14 59357781 59469195 - Ptk2b protein_coding retained_intron MGP_BALBcJ_T0039144.1 MGP_BALBcJ_G0021208.1 mouse_genomes_project 14 43368311 43369484 + MGP_BALBcJ_P0039144 Olfr745 protein_coding protein_coding MGP_BALBcJ_T0040316.1 MGP_BALBcJ_G0021615.1 mouse_genomes_project 14 111967138 111967867 + MGP_BALBcJ_P0040316 Gm9376 protein_coding protein_coding MGP_BALBcJ_T0009963.1 MGP_BALBcJ_G0008088.1 mouse_genomes_project 14 42192798 42192903 - Gm22949 miRNA miRNA MGP_BALBcJ_T0006648.1 MGP_BALBcJ_G0005496.1 mouse_genomes_project 14 18661992 18696403 + 4933413J09Rik lincRNA lincRNA MGP_BALBcJ_T0006649.1 MGP_BALBcJ_G0005496.1 mouse_genomes_project 14 18662965 18713363 + 4933413J09Rik lincRNA lincRNA MGP_BALBcJ_T0006650.1 MGP_BALBcJ_G0005496.1 mouse_genomes_project 14 18662998 18683499 + 4933413J09Rik lincRNA lincRNA MGP_BALBcJ_T0006651.1 MGP_BALBcJ_G0005496.1 mouse_genomes_project 14 18668049 18684617 + 4933413J09Rik lincRNA lincRNA MGP_BALBcJ_T0006652.1 MGP_BALBcJ_G0005496.1 mouse_genomes_project 14 18669806 18684515 + 4933413J09Rik lincRNA lincRNA MGP_BALBcJ_T0006653.1 MGP_BALBcJ_G0005496.1 mouse_genomes_project 14 18669806 18709549 + 4933413J09Rik lincRNA lincRNA MGP_BALBcJ_T0006672.1 MGP_BALBcJ_G0005511.1 mouse_genomes_project 14 42784744 42786556 + Gm45057 lincRNA lincRNA MGP_BALBcJ_T0040304.1 MGP_BALBcJ_G0021609.1 mouse_genomes_project 14 108815585 108849459 + Gpc5 protein_coding retained_intron MGP_BALBcJ_T0040305.1 MGP_BALBcJ_G0021609.1 mouse_genomes_project 14 108815620 110232601 + MGP_BALBcJ_P0040305 Gpc5 protein_coding protein_coding MGP_BALBcJ_T0040306.1 MGP_BALBcJ_G0021609.1 mouse_genomes_project 14 108815642 109127973 + MGP_BALBcJ_P0040306 Gpc5 protein_coding protein_coding MGP_BALBcJ_T0040307.1 MGP_BALBcJ_G0021609.1 mouse_genomes_project 14 108815996 110231859 + MGP_BALBcJ_P0040307 Gpc5 protein_coding protein_coding MGP_BALBcJ_T0013019.1 MGP_BALBcJ_G0011116.1 mouse_genomes_project 14 116247185 116252029 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000921.1 MGP_BALBcJ_G0000852.1 mouse_genomes_project 14 93329588 93377715 - TEC TEC MGP_BALBcJ_T0038842.1 MGP_BALBcJ_G0021096.1 mouse_genomes_project 14 24824684 24836680 - MGP_BALBcJ_P0038842 1700024G13Rik protein_coding protein_coding MGP_BALBcJ_T0012954.1 MGP_BALBcJ_G0011051.1 mouse_genomes_project 14 10454946 10455824 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002586.1 MGP_BALBcJ_G0002485.1 mouse_genomes_project 14 45362792 45363765 + MGP_BALBcJ_P0002586 Trav1 TR_V_gene TR_V_gene MGP_BALBcJ_T0002587.1 MGP_BALBcJ_G0002485.1 mouse_genomes_project 14 45362831 45363765 + MGP_BALBcJ_P0002587 Trav1 TR_V_gene TR_V_gene MGP_BALBcJ_T0003516.1 MGP_BALBcJ_G0003198.1 mouse_genomes_project 14 26966310 26967280 + Gm17110 antisense antisense MGP_BALBcJ_T0038575.1 MGP_BALBcJ_G0021033.1 mouse_genomes_project 14 18827561 18827918 + MGP_BALBcJ_P0038575 Gm2178 protein_coding protein_coding MGP_BALBcJ_T0040170.1 MGP_BALBcJ_G0021559.1 mouse_genomes_project 14 72402095 72415472 - MGP_BALBcJ_P0040170 Rgcc protein_coding protein_coding MGP_BALBcJ_T0039128.1 MGP_BALBcJ_G0021195.1 mouse_genomes_project 14 42926857 42927838 - MGP_BALBcJ_P0039128 Olfr731 protein_coding protein_coding MGP_BALBcJ_T0017340.1 MGP_BALBcJ_G0015205.1 mouse_genomes_project 14 14415516 14418974 + A430057M04Rik processed_transcript processed_transcript MGP_BALBcJ_T0017341.1 MGP_BALBcJ_G0015205.1 mouse_genomes_project 14 14416386 14424923 + A430057M04Rik processed_transcript processed_transcript MGP_BALBcJ_T0040156.1 MGP_BALBcJ_G0021551.1 mouse_genomes_project 14 70915055 70963216 - MGP_BALBcJ_P0040156 Dnajc15 protein_coding protein_coding MGP_BALBcJ_T0040276.1 MGP_BALBcJ_G0021596.1 mouse_genomes_project 14 97197739 97251651 + MGP_BALBcJ_P0040276 Slain1 protein_coding protein_coding MGP_BALBcJ_T0040277.1 MGP_BALBcJ_G0021596.1 mouse_genomes_project 14 97198157 97251054 + MGP_BALBcJ_P0040277 Slain1 protein_coding protein_coding MGP_BALBcJ_T0040278.1 MGP_BALBcJ_G0021596.1 mouse_genomes_project 14 97203281 97235177 + MGP_BALBcJ_P0040278 Slain1 protein_coding protein_coding MGP_BALBcJ_T0040279.1 MGP_BALBcJ_G0021596.1 mouse_genomes_project 14 97211998 97251546 + MGP_BALBcJ_P0040279 Slain1 protein_coding protein_coding MGP_BALBcJ_T0038401.1 MGP_BALBcJ_G0020992.1 mouse_genomes_project 14 13207294 13215163 - MGP_BALBcJ_P0038401 Myoz1 protein_coding protein_coding MGP_BALBcJ_T0038913.1 MGP_BALBcJ_G0021129.1 mouse_genomes_project 14 26992250 27055122 - MGP_BALBcJ_P0038913 Ldb3 protein_coding protein_coding MGP_BALBcJ_T0038914.1 MGP_BALBcJ_G0021129.1 mouse_genomes_project 14 26992250 27055122 - MGP_BALBcJ_P0038914 Ldb3 protein_coding protein_coding MGP_BALBcJ_T0038915.1 MGP_BALBcJ_G0021129.1 mouse_genomes_project 14 26992250 27055122 - MGP_BALBcJ_P0038915 Ldb3 protein_coding protein_coding MGP_BALBcJ_T0038916.1 MGP_BALBcJ_G0021129.1 mouse_genomes_project 14 26992250 27055048 - MGP_BALBcJ_P0038916 Ldb3 protein_coding protein_coding MGP_BALBcJ_T0038917.1 MGP_BALBcJ_G0021129.1 mouse_genomes_project 14 26995011 27045586 - MGP_BALBcJ_P0038917 Ldb3 protein_coding unknown_likely_coding MGP_BALBcJ_T0038918.1 MGP_BALBcJ_G0021129.1 mouse_genomes_project 14 27027512 27055122 - MGP_BALBcJ_P0038918 Ldb3 protein_coding protein_coding MGP_BALBcJ_T0038680.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23359891 23361794 - MGP_BALBcJ_P0038680 Spcs1 protein_coding protein_coding MGP_BALBcJ_T0038681.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23359891 23361857 - MGP_BALBcJ_P0038681 Spcs1 protein_coding protein_coding MGP_BALBcJ_T0038682.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23359892 23361851 - MGP_BALBcJ_P0038682 Spcs1 protein_coding protein_coding MGP_BALBcJ_T0038683.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23359892 23361548 - MGP_BALBcJ_P0038683 Spcs1 protein_coding protein_coding MGP_BALBcJ_T0038684.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23359893 23361554 - Spcs1 protein_coding retained_intron MGP_BALBcJ_T0038685.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23360401 23361535 - Spcs1 protein_coding retained_intron MGP_BALBcJ_T0038686.1 MGP_BALBcJ_G0021066.1 mouse_genomes_project 14 23360580 23361552 - MGP_BALBcJ_P0038686 Spcs1 protein_coding protein_coding MGP_BALBcJ_T0003512.1 MGP_BALBcJ_G0003194.1 mouse_genomes_project 14 18990935 18991433 + 9930004E17Rik antisense antisense MGP_BALBcJ_T0003534.1 MGP_BALBcJ_G0003214.1 mouse_genomes_project 14 48051953 48070446 + Gm20687 antisense antisense MGP_BALBcJ_T0006682.1 MGP_BALBcJ_G0005518.1 mouse_genomes_project 14 48886862 48897243 - Gm26751 lincRNA lincRNA MGP_BALBcJ_T0040346.1 MGP_BALBcJ_G0021626.1 mouse_genomes_project 14 114773433 114974246 + MGP_BALBcJ_P0040346 Farp1 protein_coding protein_coding MGP_BALBcJ_T0040347.1 MGP_BALBcJ_G0021626.1 mouse_genomes_project 14 114773797 115023253 + MGP_BALBcJ_P0040347 Farp1 protein_coding protein_coding MGP_BALBcJ_T0040348.1 MGP_BALBcJ_G0021626.1 mouse_genomes_project 14 114838471 114977768 + Farp1 protein_coding processed_transcript MGP_BALBcJ_T0040349.1 MGP_BALBcJ_G0021626.1 mouse_genomes_project 14 114994443 115007549 + Farp1 protein_coding retained_intron MGP_BALBcJ_T0038984.1 MGP_BALBcJ_G0021155.1 mouse_genomes_project 14 37733063 37737270 + Gpr137c protein_coding processed_transcript MGP_BALBcJ_T0038985.1 MGP_BALBcJ_G0021155.1 mouse_genomes_project 14 37733337 37796945 + MGP_BALBcJ_P0038985 Gpr137c protein_coding protein_coding MGP_BALBcJ_T0038986.1 MGP_BALBcJ_G0021155.1 mouse_genomes_project 14 37780332 37794968 + Gpr137c protein_coding retained_intron MGP_BALBcJ_T0039609.1 MGP_BALBcJ_G0021336.1 mouse_genomes_project 14 48846351 48855502 + MGP_BALBcJ_P0039609 Nfatc4 protein_coding protein_coding MGP_BALBcJ_T0039610.1 MGP_BALBcJ_G0021336.1 mouse_genomes_project 14 48846351 48855502 + MGP_BALBcJ_P0039610 Nfatc4 protein_coding protein_coding MGP_BALBcJ_T0003529.1 MGP_BALBcJ_G0003210.1 mouse_genomes_project 14 47120267 47131514 - antisense antisense MGP_BALBcJ_T0038258.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 1857543 2750291 - MGP_BALBcJ_P0038258 Fhit protein_coding protein_coding MGP_BALBcJ_T0038259.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 1857551 3458100 - MGP_BALBcJ_P0038259 Fhit protein_coding protein_coding MGP_BALBcJ_T0038260.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 1857551 3458097 - MGP_BALBcJ_P0038260 Fhit protein_coding protein_coding MGP_BALBcJ_T0038261.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 1857844 2176640 - MGP_BALBcJ_P0038261 Fhit protein_coding unknown_likely_coding MGP_BALBcJ_T0038262.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 1857844 2718455 - MGP_BALBcJ_P0038262 Fhit protein_coding protein_coding MGP_BALBcJ_T0038263.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 1881008 3421456 - MGP_BALBcJ_P0038263 Fhit protein_coding protein_coding MGP_BALBcJ_T0038264.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 2068994 3421044 - Fhit protein_coding retained_intron MGP_BALBcJ_T0038265.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 2069101 3421427 - MGP_BALBcJ_P0038265 Fhit protein_coding protein_coding MGP_BALBcJ_T0038266.1 MGP_BALBcJ_G0020946.1 mouse_genomes_project 14 2174384 3458100 - MGP_BALBcJ_P0038266 Fhit protein_coding protein_coding MGP_BALBcJ_T0098510.1 MGP_BALBcJ_G0036564.1 mouse_genomes_project 14 81389823 81389923 + Gm26405 rRNA rRNA MGP_BALBcJ_T0012959.1 MGP_BALBcJ_G0011056.1 mouse_genomes_project 14 15125707 15126079 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003513.1 MGP_BALBcJ_G0003195.1 mouse_genomes_project 14 23124668 23131999 - 1700087M22Rik antisense antisense MGP_BALBcJ_T0038635.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22945036 22960315 - MGP_BALBcJ_P0038635 Prkcd protein_coding protein_coding MGP_BALBcJ_T0038636.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22945044 22976391 - MGP_BALBcJ_P0038636 Prkcd protein_coding protein_coding MGP_BALBcJ_T0038637.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22945046 22960315 - MGP_BALBcJ_P0038637 Prkcd protein_coding protein_coding MGP_BALBcJ_T0038638.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22945285 22957835 - MGP_BALBcJ_P0038638 Prkcd protein_coding protein_coding MGP_BALBcJ_T0038639.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22945344 22949894 - Prkcd protein_coding retained_intron MGP_BALBcJ_T0038640.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22948093 22957835 - MGP_BALBcJ_P0038640 Prkcd protein_coding protein_coding MGP_BALBcJ_T0038641.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22948093 22957835 - MGP_BALBcJ_P0038641 Prkcd protein_coding protein_coding MGP_BALBcJ_T0038642.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22949948 22976355 - Prkcd protein_coding retained_intron MGP_BALBcJ_T0038643.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22952130 22955854 - Prkcd protein_coding retained_intron MGP_BALBcJ_T0038644.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22952225 22955663 - Prkcd protein_coding retained_intron MGP_BALBcJ_T0038645.1 MGP_BALBcJ_G0021057.1 mouse_genomes_project 14 22953726 22957357 - Prkcd protein_coding retained_intron MGP_BALBcJ_T0010004.1 MGP_BALBcJ_G0008129.1 mouse_genomes_project 14 111958812 111958915 + Mir6241 miRNA miRNA MGP_BALBcJ_T0002570.1 MGP_BALBcJ_G0002471.1 mouse_genomes_project 14 47155006 47155049 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0012967.1 MGP_BALBcJ_G0011064.1 mouse_genomes_project 14 21536890 21537382 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038230.1 MGP_BALBcJ_G0020934.1 mouse_genomes_project 14 110951 251144 + MGP_BALBcJ_P0038230 Flnb protein_coding protein_coding MGP_BALBcJ_T0038231.1 MGP_BALBcJ_G0020934.1 mouse_genomes_project 14 111146 236446 + MGP_BALBcJ_P0038231 Flnb protein_coding unknown_likely_coding MGP_BALBcJ_T0098511.1 MGP_BALBcJ_G0036565.1 mouse_genomes_project 14 96359292 96359340 + Gm23764 rRNA rRNA MGP_BALBcJ_T0009948.1 MGP_BALBcJ_G0008073.1 mouse_genomes_project 14 3579942 3580027 + Mir5124b miRNA miRNA MGP_BALBcJ_T0038457.1 MGP_BALBcJ_G0021007.1 mouse_genomes_project 14 14315867 14358700 + MGP_BALBcJ_P0038457 Samd8 protein_coding protein_coding MGP_BALBcJ_T0038458.1 MGP_BALBcJ_G0021007.1 mouse_genomes_project 14 14315884 14358700 + MGP_BALBcJ_P0038458 Samd8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038459.1 MGP_BALBcJ_G0021007.1 mouse_genomes_project 14 14316137 14358638 + MGP_BALBcJ_P0038459 Samd8 protein_coding unknown_likely_coding MGP_BALBcJ_T0038460.1 MGP_BALBcJ_G0021007.1 mouse_genomes_project 14 14316888 14364500 + MGP_BALBcJ_P0038460 Samd8 protein_coding protein_coding MGP_BALBcJ_T0038461.1 MGP_BALBcJ_G0021007.1 mouse_genomes_project 14 14357263 14358372 + Samd8 protein_coding retained_intron MGP_BALBcJ_T0039742.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53741789 53802578 + MGP_BALBcJ_P0039742 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039743.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53742031 53877602 + MGP_BALBcJ_P0039743 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039744.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53742517 53877609 + MGP_BALBcJ_P0039744 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039745.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53742522 53802619 + MGP_BALBcJ_P0039745 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039746.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53742543 53802104 + Spata13 protein_coding processed_transcript MGP_BALBcJ_T0039747.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53803185 53821668 + MGP_BALBcJ_P0039747 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039748.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53814612 53818530 + Spata13 protein_coding processed_transcript MGP_BALBcJ_T0039749.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53818388 53863071 + MGP_BALBcJ_P0039749 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039750.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53845630 53877602 + MGP_BALBcJ_P0039750 Spata13 protein_coding protein_coding MGP_BALBcJ_T0039751.1 MGP_BALBcJ_G0021397.1 mouse_genomes_project 14 53864131 53875719 + Spata13 protein_coding retained_intron MGP_BALBcJ_T0039319.1 MGP_BALBcJ_G0021258.1 mouse_genomes_project 14 45241177 45246332 - Sall2 protein_coding processed_transcript MGP_BALBcJ_T0039320.1 MGP_BALBcJ_G0021258.1 mouse_genomes_project 14 45241177 45258819 - MGP_BALBcJ_P0039320 Sall2 protein_coding protein_coding MGP_BALBcJ_T0039434.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47888115 47892801 + MGP_BALBcJ_P0039434 Pabpn1 protein_coding protein_coding MGP_BALBcJ_T0039435.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47889765 47893842 + MGP_BALBcJ_P0039435 Pabpn1 protein_coding protein_coding MGP_BALBcJ_T0039436.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47889772 47893716 + MGP_BALBcJ_P0039436 Pabpn1 protein_coding protein_coding MGP_BALBcJ_T0039437.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47889773 47894602 + MGP_BALBcJ_P0039437 Pabpn1 protein_coding protein_coding MGP_BALBcJ_T0039438.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47889773 47893676 + MGP_BALBcJ_P0039438 Pabpn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039439.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47890235 47893754 + MGP_BALBcJ_P0039439 Pabpn1 protein_coding protein_coding MGP_BALBcJ_T0039440.1 MGP_BALBcJ_G0021292.1 mouse_genomes_project 14 47890450 47891509 + MGP_BALBcJ_P0039440 Pabpn1 protein_coding protein_coding MGP_BALBcJ_T0038873.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25825209 25896079 - MGP_BALBcJ_P0038873 Mapk8 protein_coding protein_coding MGP_BALBcJ_T0038874.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25828360 25896066 - MGP_BALBcJ_P0038874 Mapk8 protein_coding protein_coding MGP_BALBcJ_T0038875.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25829416 25896063 - MGP_BALBcJ_P0038875 Mapk8 protein_coding protein_coding MGP_BALBcJ_T0038876.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25829481 25859809 - MGP_BALBcJ_P0038876 Mapk8 protein_coding protein_coding MGP_BALBcJ_T0038877.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25829616 25837610 - Mapk8 protein_coding processed_transcript MGP_BALBcJ_T0038878.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25829619 25859792 - MGP_BALBcJ_P0038878 Mapk8 protein_coding protein_coding MGP_BALBcJ_T0038879.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25831224 25836530 - Mapk8 protein_coding retained_intron MGP_BALBcJ_T0038880.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25838239 25896079 - Mapk8 protein_coding retained_intron MGP_BALBcJ_T0038881.1 MGP_BALBcJ_G0021108.1 mouse_genomes_project 14 25855843 25896078 - Mapk8 protein_coding retained_intron MGP_BALBcJ_T0040195.1 MGP_BALBcJ_G0021571.1 mouse_genomes_project 14 79913866 80416761 - MGP_BALBcJ_P0040195 Diaph3 protein_coding protein_coding MGP_BALBcJ_T0040196.1 MGP_BALBcJ_G0021571.1 mouse_genomes_project 14 79914781 80416651 - MGP_BALBcJ_P0040196 Diaph3 protein_coding protein_coding MGP_BALBcJ_T0100677.1 MGP_BALBcJ_G0038713.1 mouse_genomes_project 14 23376477 23376556 - Gm24916 snoRNA snoRNA MGP_BALBcJ_T0012999.1 MGP_BALBcJ_G0011096.1 mouse_genomes_project 14 67774692 67788441 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039628.1 MGP_BALBcJ_G0021352.1 mouse_genomes_project 14 49306428 49313688 - MGP_BALBcJ_P0039628 Gzmc protein_coding protein_coding MGP_BALBcJ_T0009964.1 MGP_BALBcJ_G0008089.1 mouse_genomes_project 14 47603822 47603931 - Mir686 miRNA miRNA MGP_BALBcJ_T0002600.1 MGP_BALBcJ_G0002495.1 mouse_genomes_project 14 45704545 45705094 + MGP_BALBcJ_P0002600 TR_V_gene TR_V_gene MGP_BALBcJ_T0039122.1 MGP_BALBcJ_G0021189.1 mouse_genomes_project 14 42696208 42697746 - MGP_BALBcJ_P0039122 protein_coding protein_coding MGP_BALBcJ_T0012966.1 MGP_BALBcJ_G0011063.1 mouse_genomes_project 14 18881731 18884673 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038659.1 MGP_BALBcJ_G0021060.1 mouse_genomes_project 14 23176496 23229229 + MGP_BALBcJ_P0038659 Tmem110 protein_coding protein_coding MGP_BALBcJ_T0038660.1 MGP_BALBcJ_G0021060.1 mouse_genomes_project 14 23176500 23226813 + MGP_BALBcJ_P0038660 Tmem110 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038661.1 MGP_BALBcJ_G0021060.1 mouse_genomes_project 14 23218683 23227207 + Tmem110 protein_coding processed_transcript MGP_BALBcJ_T0038662.1 MGP_BALBcJ_G0021060.1 mouse_genomes_project 14 23222749 23224795 + Tmem110 protein_coding retained_intron MGP_BALBcJ_T0038663.1 MGP_BALBcJ_G0021060.1 mouse_genomes_project 14 23224597 23227243 + Tmem110 protein_coding retained_intron MGP_BALBcJ_T0038257.1 MGP_BALBcJ_G0020945.1 mouse_genomes_project 14 1102675 1103229 + MGP_BALBcJ_P0038257 protein_coding protein_coding MGP_BALBcJ_T0000908.1 MGP_BALBcJ_G0000839.1 mouse_genomes_project 14 54790537 54793449 - TEC TEC MGP_BALBcJ_T0038527.1 MGP_BALBcJ_G0021021.1 mouse_genomes_project 14 18463125 18478376 - MGP_BALBcJ_P0038527 Plac9b protein_coding protein_coding MGP_BALBcJ_T0038534.1 MGP_BALBcJ_G0021021.1 mouse_genomes_project 14 18464501 18478339 - MGP_BALBcJ_P0038534 Plac9b protein_coding protein_coding MGP_BALBcJ_T0006631.1 MGP_BALBcJ_G0005485.1 mouse_genomes_project 14 973994 980925 + 4930455B14Rik lincRNA lincRNA MGP_BALBcJ_T0006632.1 MGP_BALBcJ_G0005485.1 mouse_genomes_project 14 973994 980983 + 4930455B14Rik lincRNA lincRNA MGP_BALBcJ_T0040162.1 MGP_BALBcJ_G0021554.1 mouse_genomes_project 14 71378997 71410064 - MGP_BALBcJ_P0040162 Tnfsf11 protein_coding protein_coding MGP_BALBcJ_T0006646.1 MGP_BALBcJ_G0005494.1 mouse_genomes_project 14 17929157 17952130 - Gm26660 lincRNA lincRNA MGP_BALBcJ_T0040221.1 MGP_BALBcJ_G0021582.1 mouse_genomes_project 14 92871791 92886506 + MGP_BALBcJ_P0040221 Klf5 protein_coding protein_coding MGP_BALBcJ_T0006673.1 MGP_BALBcJ_G0005512.1 mouse_genomes_project 14 43600696 43607655 + Gm26782 lincRNA lincRNA MGP_BALBcJ_T0006674.1 MGP_BALBcJ_G0005512.1 mouse_genomes_project 14 43600708 43609248 + Gm26782 lincRNA lincRNA MGP_BALBcJ_T0006688.1 MGP_BALBcJ_G0005523.1 mouse_genomes_project 14 54748632 54750044 - Gm27010 lincRNA lincRNA MGP_BALBcJ_T0039808.1 MGP_BALBcJ_G0021425.1 mouse_genomes_project 14 56535823 56580155 - MGP_BALBcJ_P0039808 Blk protein_coding protein_coding MGP_BALBcJ_T0100712.1 MGP_BALBcJ_G0038748.1 mouse_genomes_project 14 90482621 90482713 + Gm24770 snoRNA snoRNA MGP_BALBcJ_T0039663.1 MGP_BALBcJ_G0021372.1 mouse_genomes_project 14 50660288 50682355 - MGP_BALBcJ_P0039663 Eef1akmt1 protein_coding protein_coding MGP_BALBcJ_T0012994.1 MGP_BALBcJ_G0011091.1 mouse_genomes_project 14 53290684 53290889 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006710.1 MGP_BALBcJ_G0005539.1 mouse_genomes_project 14 99980475 100049374 - 1700128A07Rik lincRNA lincRNA MGP_BALBcJ_T0006711.1 MGP_BALBcJ_G0005539.1 mouse_genomes_project 14 100006108 100049346 - 1700128A07Rik lincRNA lincRNA MGP_BALBcJ_T0017344.1 MGP_BALBcJ_G0015207.1 mouse_genomes_project 14 37460408 37466498 - 4930431P03Rik processed_transcript retained_intron MGP_BALBcJ_T0017345.1 MGP_BALBcJ_G0015207.1 mouse_genomes_project 14 37461610 37466498 - 4930431P03Rik processed_transcript antisense MGP_BALBcJ_T0040280.1 MGP_BALBcJ_G0021597.1 mouse_genomes_project 14 97368257 97398281 - MGP_BALBcJ_P0040280 Ednrb protein_coding protein_coding MGP_BALBcJ_T0040281.1 MGP_BALBcJ_G0021597.1 mouse_genomes_project 14 97368258 97397804 - MGP_BALBcJ_P0040281 Ednrb protein_coding protein_coding MGP_BALBcJ_T0040009.1 MGP_BALBcJ_G0021503.1 mouse_genomes_project 14 63488951 63500255 + MGP_BALBcJ_P0040009 Phyhip protein_coding protein_coding MGP_BALBcJ_T0040010.1 MGP_BALBcJ_G0021503.1 mouse_genomes_project 14 63489998 63494774 + MGP_BALBcJ_P0040010 Phyhip protein_coding protein_coding MGP_BALBcJ_T0039198.1 MGP_BALBcJ_G0021239.1 mouse_genomes_project 14 44624716 44630284 - MGP_BALBcJ_P0039198 Gm5800 protein_coding protein_coding MGP_BALBcJ_T0006659.1 MGP_BALBcJ_G0005502.1 mouse_genomes_project 14 27226027 27232626 + A930038B10Rik lincRNA lincRNA MGP_BALBcJ_T0006660.1 MGP_BALBcJ_G0005502.1 mouse_genomes_project 14 27226852 27237165 + A930038B10Rik lincRNA lincRNA MGP_BALBcJ_T0040212.1 MGP_BALBcJ_G0021575.1 mouse_genomes_project 14 89388274 89389783 + MGP_BALBcJ_P0040212 4921530L21Rik protein_coding protein_coding MGP_BALBcJ_T0039119.1 MGP_BALBcJ_G0021186.1 mouse_genomes_project 14 42556322 42564436 - MGP_BALBcJ_P0039119 Olfr722 protein_coding protein_coding MGP_BALBcJ_T0038550.1 MGP_BALBcJ_G0021030.1 mouse_genomes_project 14 18553120 18562510 + MGP_BALBcJ_P0038550 Duxbl3 protein_coding protein_coding MGP_BALBcJ_T0038551.1 MGP_BALBcJ_G0021030.1 mouse_genomes_project 14 18553438 18562701 + MGP_BALBcJ_P0038551 Duxbl3 protein_coding protein_coding MGP_BALBcJ_T0038553.1 MGP_BALBcJ_G0021030.1 mouse_genomes_project 14 18554076 18560570 + MGP_BALBcJ_P0038553 Duxbl3 protein_coding protein_coding MGP_BALBcJ_T0038555.1 MGP_BALBcJ_G0021030.1 mouse_genomes_project 14 18554410 18561308 + Duxbl3 protein_coding processed_transcript MGP_BALBcJ_T0038558.1 MGP_BALBcJ_G0021030.1 mouse_genomes_project 14 18556781 18563880 + MGP_BALBcJ_P0038558 Duxbl3 protein_coding protein_coding MGP_BALBcJ_T0039138.1 MGP_BALBcJ_G0021202.1 mouse_genomes_project 14 43114475 43115411 + MGP_BALBcJ_P0039138 Olfr738 protein_coding protein_coding MGP_BALBcJ_T0003549.1 MGP_BALBcJ_G0003225.1 mouse_genomes_project 14 57282911 57286369 - Gm17116 antisense antisense MGP_BALBcJ_T0040098.1 MGP_BALBcJ_G0021530.1 mouse_genomes_project 14 68062901 68099483 + MGP_BALBcJ_P0040098 5031414D18Rik protein_coding protein_coding MGP_BALBcJ_T0009974.1 MGP_BALBcJ_G0008099.1 mouse_genomes_project 14 56002000 56002110 + Mir6541 miRNA miRNA MGP_BALBcJ_T0038365.1 MGP_BALBcJ_G0020979.1 mouse_genomes_project 14 12639975 12647502 - MGP_BALBcJ_P0038365 Saysd1 protein_coding protein_coding MGP_BALBcJ_T0002543.1 MGP_BALBcJ_G0002446.1 mouse_genomes_project 14 47196157 47196216 + MGP_BALBcJ_P0002543 Traj11 TR_J_gene TR_J_gene MGP_BALBcJ_T0039811.1 MGP_BALBcJ_G0021427.1 mouse_genomes_project 14 56657990 56674678 - MGP_BALBcJ_P0039811 Tdh protein_coding protein_coding MGP_BALBcJ_T0039812.1 MGP_BALBcJ_G0021427.1 mouse_genomes_project 14 56658295 56665929 - MGP_BALBcJ_P0039812 Tdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039813.1 MGP_BALBcJ_G0021427.1 mouse_genomes_project 14 56658350 56665929 - MGP_BALBcJ_P0039813 Tdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039814.1 MGP_BALBcJ_G0021427.1 mouse_genomes_project 14 56658350 56665929 - MGP_BALBcJ_P0039814 Tdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039815.1 MGP_BALBcJ_G0021427.1 mouse_genomes_project 14 56661287 56662809 - Tdh protein_coding retained_intron MGP_BALBcJ_T0039816.1 MGP_BALBcJ_G0021427.1 mouse_genomes_project 14 56669495 56674342 - Tdh protein_coding processed_transcript MGP_BALBcJ_T0040204.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 86441813 87322355 - MGP_BALBcJ_P0040204 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0040205.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 86442105 87322355 - MGP_BALBcJ_P0040205 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0040206.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 86442379 87322315 - MGP_BALBcJ_P0040206 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0040207.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 86442606 87321844 - MGP_BALBcJ_P0040207 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0040208.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 86443920 87320425 - MGP_BALBcJ_P0040208 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0040209.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 86593132 87317441 - MGP_BALBcJ_P0040209 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0040210.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 87317262 87317917 - Pcdh9 protein_coding retained_intron MGP_BALBcJ_T0040211.1 MGP_BALBcJ_G0021574.1 mouse_genomes_project 14 87317805 87322365 - MGP_BALBcJ_P0040211 Pcdh9 protein_coding protein_coding MGP_BALBcJ_T0012970.1 MGP_BALBcJ_G0011067.1 mouse_genomes_project 14 25343890 25344901 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003552.1 MGP_BALBcJ_G0003228.1 mouse_genomes_project 14 62491868 62494760 + Gm27222 antisense antisense MGP_BALBcJ_T0006687.1 MGP_BALBcJ_G0005522.1 mouse_genomes_project 14 53599361 53706811 + Gm29266 lincRNA lincRNA MGP_BALBcJ_T0038905.1 MGP_BALBcJ_G0021124.1 mouse_genomes_project 14 26817050 26820639 - MGP_BALBcJ_P0038905 Fam25c protein_coding protein_coding MGP_BALBcJ_T0040356.1 MGP_BALBcJ_G0021630.1 mouse_genomes_project 14 115644729 115790539 + MGP_BALBcJ_P0040356 Ubac2 protein_coding protein_coding MGP_BALBcJ_T0006681.1 MGP_BALBcJ_G0005517.1 mouse_genomes_project 14 47329820 47331994 - 5330426L24Rik lincRNA lincRNA MGP_BALBcJ_T0038324.1 MGP_BALBcJ_G0020968.1 mouse_genomes_project 14 8833925 8978892 - MGP_BALBcJ_P0038324 Rarb protein_coding protein_coding MGP_BALBcJ_T0039890.1 MGP_BALBcJ_G0021459.1 mouse_genomes_project 14 59489333 59503735 + MGP_BALBcJ_P0039890 Trim35 protein_coding protein_coding MGP_BALBcJ_T0039891.1 MGP_BALBcJ_G0021459.1 mouse_genomes_project 14 59489392 59500608 + MGP_BALBcJ_P0039891 Trim35 protein_coding protein_coding MGP_BALBcJ_T0003543.1 MGP_BALBcJ_G0003221.1 mouse_genomes_project 14 54414805 54426950 - 1700109G14Rik antisense antisense MGP_BALBcJ_T0003544.1 MGP_BALBcJ_G0003221.1 mouse_genomes_project 14 54416495 54440911 - 1700109G14Rik antisense antisense MGP_BALBcJ_T0003545.1 MGP_BALBcJ_G0003221.1 mouse_genomes_project 14 54426440 54426924 - 1700109G14Rik antisense antisense MGP_BALBcJ_T0039623.1 MGP_BALBcJ_G0021347.1 mouse_genomes_project 14 49162994 49171862 - MGP_BALBcJ_P0039623 Gzme protein_coding protein_coding MGP_BALBcJ_T0017388.1 MGP_BALBcJ_G0015222.1 mouse_genomes_project 14 111936271 111938799 + Gm4675 processed_transcript processed_transcript MGP_BALBcJ_T0017389.1 MGP_BALBcJ_G0015222.1 mouse_genomes_project 14 111936919 111961378 + Gm4675 processed_transcript processed_transcript MGP_BALBcJ_T0017390.1 MGP_BALBcJ_G0015222.1 mouse_genomes_project 14 111953906 111954449 + Gm4675 processed_transcript processed_transcript MGP_BALBcJ_T0038706.1 MGP_BALBcJ_G0021070.1 mouse_genomes_project 14 23462248 23504126 - MGP_BALBcJ_P0038706 Smim4 protein_coding protein_coding MGP_BALBcJ_T0038707.1 MGP_BALBcJ_G0021070.1 mouse_genomes_project 14 23462775 23504146 - MGP_BALBcJ_P0038707 Smim4 protein_coding protein_coding MGP_BALBcJ_T0038708.1 MGP_BALBcJ_G0021070.1 mouse_genomes_project 14 23499549 23504071 - MGP_BALBcJ_P0038708 Smim4 protein_coding protein_coding MGP_BALBcJ_T0038709.1 MGP_BALBcJ_G0021070.1 mouse_genomes_project 14 23499846 23504163 - MGP_BALBcJ_P0038709 Smim4 protein_coding protein_coding MGP_BALBcJ_T0003525.1 MGP_BALBcJ_G0003207.1 mouse_genomes_project 14 46278960 46288486 - Gm43650 antisense antisense MGP_BALBcJ_T0040081.1 MGP_BALBcJ_G0021526.1 mouse_genomes_project 14 66580426 66584622 + Sucla2 protein_coding processed_transcript MGP_BALBcJ_T0040082.1 MGP_BALBcJ_G0021526.1 mouse_genomes_project 14 66580602 66627861 + MGP_BALBcJ_P0040082 Sucla2 protein_coding protein_coding MGP_BALBcJ_T0040083.1 MGP_BALBcJ_G0021526.1 mouse_genomes_project 14 66600252 66600841 + Sucla2 protein_coding retained_intron MGP_BALBcJ_T0040084.1 MGP_BALBcJ_G0021526.1 mouse_genomes_project 14 66622217 66622743 + Sucla2 protein_coding retained_intron MGP_BALBcJ_T0040085.1 MGP_BALBcJ_G0021526.1 mouse_genomes_project 14 66627115 66627852 + Sucla2 protein_coding processed_transcript MGP_BALBcJ_T0006675.1 MGP_BALBcJ_G0005513.1 mouse_genomes_project 14 44095334 44100620 + Gm21718 lincRNA lincRNA MGP_BALBcJ_T0006676.1 MGP_BALBcJ_G0005513.1 mouse_genomes_project 14 44096664 44101629 + Gm21718 lincRNA lincRNA MGP_BALBcJ_T0038376.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12952977 13009770 - MGP_BALBcJ_P0038376 Cfap70 protein_coding protein_coding MGP_BALBcJ_T0038377.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12952977 13009770 - MGP_BALBcJ_P0038377 Cfap70 protein_coding protein_coding MGP_BALBcJ_T0038378.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12952977 13009770 - MGP_BALBcJ_P0038378 Cfap70 protein_coding protein_coding MGP_BALBcJ_T0038379.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12952980 13009767 - MGP_BALBcJ_P0038379 Cfap70 protein_coding protein_coding MGP_BALBcJ_T0038380.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12982427 13009771 - Cfap70 protein_coding retained_intron MGP_BALBcJ_T0038381.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12982928 12987578 - Cfap70 protein_coding processed_transcript MGP_BALBcJ_T0038382.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 12997252 13009768 - MGP_BALBcJ_P0038382 Cfap70 protein_coding protein_coding MGP_BALBcJ_T0038383.1 MGP_BALBcJ_G0020987.1 mouse_genomes_project 14 13004948 13006262 - Cfap70 protein_coding retained_intron MGP_BALBcJ_T0002521.1 MGP_BALBcJ_G0002424.1 mouse_genomes_project 14 47173416 47173474 + MGP_BALBcJ_P0002521 Traj34 TR_J_gene TR_J_gene MGP_BALBcJ_T0040303.1 MGP_BALBcJ_G0021608.1 mouse_genomes_project 14 105379601 105387660 + MGP_BALBcJ_P0040303 Slitrk5 protein_coding protein_coding MGP_BALBcJ_T0039482.1 MGP_BALBcJ_G0021306.1 mouse_genomes_project 14 48469864 48480958 + MGP_BALBcJ_P0039482 Dhrs4 protein_coding protein_coding MGP_BALBcJ_T0099400.1 MGP_BALBcJ_G0037436.1 mouse_genomes_project 14 19817428 19817537 + Gm22485 snRNA snRNA MGP_BALBcJ_T0039906.1 MGP_BALBcJ_G0021462.1 mouse_genomes_project 14 59989248 59999129 + MGP_BALBcJ_P0039906 Gm10032 protein_coding protein_coding MGP_BALBcJ_T0006665.1 MGP_BALBcJ_G0005507.1 mouse_genomes_project 14 39092775 39104849 + E130120K24Rik lincRNA lincRNA MGP_BALBcJ_T0012947.1 MGP_BALBcJ_G0011044.1 mouse_genomes_project 14 93959 94782 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039455.1 MGP_BALBcJ_G0021300.1 mouse_genomes_project 14 48014053 48022653 + MGP_BALBcJ_P0039455 Ngdn protein_coding protein_coding MGP_BALBcJ_T0038541.1 MGP_BALBcJ_G0021026.1 mouse_genomes_project 14 18511772 18528876 + protein_coding processed_transcript MGP_BALBcJ_T0038545.1 MGP_BALBcJ_G0021026.1 mouse_genomes_project 14 18516328 18530282 + MGP_BALBcJ_P0038545 protein_coding protein_coding MGP_BALBcJ_T0038547.1 MGP_BALBcJ_G0021026.1 mouse_genomes_project 14 18525749 18529157 + protein_coding retained_intron MGP_BALBcJ_T0038548.1 MGP_BALBcJ_G0021026.1 mouse_genomes_project 14 18528593 18529073 + protein_coding retained_intron MGP_BALBcJ_T0012968.1 MGP_BALBcJ_G0011065.1 mouse_genomes_project 14 23155215 23155991 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002595.1 MGP_BALBcJ_G0002491.1 mouse_genomes_project 14 45623098 45623606 + MGP_BALBcJ_P0002595 TR_V_gene TR_V_gene MGP_BALBcJ_T0039974.1 MGP_BALBcJ_G0021493.1 mouse_genomes_project 14 63100632 63103345 + MGP_BALBcJ_P0039974 Egr3 protein_coding protein_coding MGP_BALBcJ_T0009972.1 MGP_BALBcJ_G0008097.1 mouse_genomes_project 14 54754921 54755005 - Mir15a miRNA miRNA MGP_BALBcJ_T0038891.1 MGP_BALBcJ_G0021118.1 mouse_genomes_project 14 26545680 26560283 + MGP_BALBcJ_P0038891 Anxa8 protein_coding protein_coding MGP_BALBcJ_T0038892.1 MGP_BALBcJ_G0021118.1 mouse_genomes_project 14 26545724 26559733 + MGP_BALBcJ_P0038892 Anxa8 protein_coding protein_coding MGP_BALBcJ_T0038629.1 MGP_BALBcJ_G0021055.1 mouse_genomes_project 14 22820168 22868272 + MGP_BALBcJ_P0038629 Dcp1a protein_coding protein_coding MGP_BALBcJ_T0039095.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41604519 41656656 - MGP_BALBcJ_P0039095 Exoc5 protein_coding protein_coding MGP_BALBcJ_T0039096.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41606166 41656399 - MGP_BALBcJ_P0039096 Exoc5 protein_coding protein_coding MGP_BALBcJ_T0039097.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41607884 41612206 - Exoc5 protein_coding retained_intron MGP_BALBcJ_T0039098.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41609166 41615683 - MGP_BALBcJ_P0039098 Exoc5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039099.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41609872 41615947 - Exoc5 protein_coding retained_intron MGP_BALBcJ_T0039100.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41621992 41627813 - Exoc5 protein_coding retained_intron MGP_BALBcJ_T0039101.1 MGP_BALBcJ_G0021180.1 mouse_genomes_project 14 41627265 41638916 - MGP_BALBcJ_P0039101 Exoc5 protein_coding protein_coding MGP_BALBcJ_T0039366.1 MGP_BALBcJ_G0021272.1 mouse_genomes_project 14 47412016 47421514 + MGP_BALBcJ_P0039366 Mmp14 protein_coding protein_coding MGP_BALBcJ_T0039367.1 MGP_BALBcJ_G0021272.1 mouse_genomes_project 14 47412027 47416623 + MGP_BALBcJ_P0039367 Mmp14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039368.1 MGP_BALBcJ_G0021272.1 mouse_genomes_project 14 47412068 47416595 + Mmp14 protein_coding retained_intron MGP_BALBcJ_T0039369.1 MGP_BALBcJ_G0021272.1 mouse_genomes_project 14 47412122 47413670 + Mmp14 protein_coding retained_intron MGP_BALBcJ_T0039370.1 MGP_BALBcJ_G0021272.1 mouse_genomes_project 14 47412243 47420945 + MGP_BALBcJ_P0039370 Mmp14 protein_coding unknown_likely_coding MGP_BALBcJ_T0039371.1 MGP_BALBcJ_G0021272.1 mouse_genomes_project 14 47412840 47416306 + MGP_BALBcJ_P0039371 Mmp14 protein_coding protein_coding MGP_BALBcJ_T0038814.1 MGP_BALBcJ_G0021090.1 mouse_genomes_project 14 24580915 24597252 + MGP_BALBcJ_P0038814 Msmb protein_coding protein_coding MGP_BALBcJ_T0038815.1 MGP_BALBcJ_G0021090.1 mouse_genomes_project 14 24586476 24597252 + MGP_BALBcJ_P0038815 Msmb protein_coding protein_coding MGP_BALBcJ_T0099396.1 MGP_BALBcJ_G0037432.1 mouse_genomes_project 14 10812083 10812239 + Gm22350 snRNA snRNA MGP_BALBcJ_T0039464.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48096622 48104579 - MGP_BALBcJ_P0039464 Ap1g2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039465.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48096894 48097433 - Ap1g2 protein_coding retained_intron MGP_BALBcJ_T0039466.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48096894 48104312 - MGP_BALBcJ_P0039466 Ap1g2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039467.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48096894 48104593 - MGP_BALBcJ_P0039467 Ap1g2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039468.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48096894 48104638 - MGP_BALBcJ_P0039468 Ap1g2 protein_coding protein_coding MGP_BALBcJ_T0039469.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48096899 48104192 - MGP_BALBcJ_P0039469 Ap1g2 protein_coding protein_coding MGP_BALBcJ_T0039470.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48097098 48104177 - Ap1g2 protein_coding processed_transcript MGP_BALBcJ_T0039471.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48098479 48098832 - Ap1g2 protein_coding retained_intron MGP_BALBcJ_T0039472.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48100394 48102555 - Ap1g2 protein_coding retained_intron MGP_BALBcJ_T0039473.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48100677 48102936 - Ap1g2 protein_coding retained_intron MGP_BALBcJ_T0039474.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48103750 48104606 - Ap1g2 protein_coding retained_intron MGP_BALBcJ_T0039475.1 MGP_BALBcJ_G0021303.1 mouse_genomes_project 14 48103969 48104553 - Ap1g2 protein_coding processed_transcript MGP_BALBcJ_T0040358.1 MGP_BALBcJ_G0021632.1 mouse_genomes_project 14 115721795 115734682 - MGP_BALBcJ_P0040358 Gpr183 protein_coding protein_coding MGP_BALBcJ_T0009956.1 MGP_BALBcJ_G0008081.1 mouse_genomes_project 14 19708405 19708528 - Gm23633 miRNA miRNA MGP_BALBcJ_T0003533.1 MGP_BALBcJ_G0003213.1 mouse_genomes_project 14 47968815 47969146 + Gm29015 antisense antisense MGP_BALBcJ_T0038417.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13592714 13613709 - MGP_BALBcJ_P0038417 Ap3m1 protein_coding protein_coding MGP_BALBcJ_T0038418.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13592731 13595839 - Ap3m1 protein_coding processed_transcript MGP_BALBcJ_T0038419.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13592806 13596053 - Ap3m1 protein_coding processed_transcript MGP_BALBcJ_T0038420.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13597286 13613481 - MGP_BALBcJ_P0038420 Ap3m1 protein_coding protein_coding MGP_BALBcJ_T0038421.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13599403 13613446 - MGP_BALBcJ_P0038421 Ap3m1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038422.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13599447 13613722 - Ap3m1 protein_coding processed_transcript MGP_BALBcJ_T0038423.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13602250 13613336 - Ap3m1 protein_coding processed_transcript MGP_BALBcJ_T0038424.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13602277 13613767 - MGP_BALBcJ_P0038424 Ap3m1 protein_coding protein_coding MGP_BALBcJ_T0038425.1 MGP_BALBcJ_G0021002.1 mouse_genomes_project 14 13605914 13613379 - MGP_BALBcJ_P0038425 Ap3m1 protein_coding protein_coding MGP_BALBcJ_T0003561.1 MGP_BALBcJ_G0003233.1 mouse_genomes_project 14 68250842 68253041 - Gm15629 antisense antisense MGP_BALBcJ_T0012997.1 MGP_BALBcJ_G0011094.1 mouse_genomes_project 14 62795620 62797683 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099395.1 MGP_BALBcJ_G0037431.1 mouse_genomes_project 14 10420267 10420330 + Gm27851 snRNA snRNA MGP_BALBcJ_T0038409.1 MGP_BALBcJ_G0020997.1 mouse_genomes_project 14 13267707 13283679 + MGP_BALBcJ_P0038409 Zswim8 protein_coding protein_coding MGP_BALBcJ_T0002597.1 MGP_BALBcJ_G0002493.1 mouse_genomes_project 14 45688277 45688869 + MGP_BALBcJ_P0002597 Trav7d-3 TR_V_gene TR_V_gene MGP_BALBcJ_T0039867.1 MGP_BALBcJ_G0021451.1 mouse_genomes_project 14 59003330 59032459 + MGP_BALBcJ_P0039867 Ccdc25 protein_coding protein_coding MGP_BALBcJ_T0038791.1 MGP_BALBcJ_G0021086.1 mouse_genomes_project 14 24094128 24177062 - MGP_BALBcJ_P0038791 Ankrd28 protein_coding unknown_likely_coding MGP_BALBcJ_T0038792.1 MGP_BALBcJ_G0021086.1 mouse_genomes_project 14 24095379 24228207 - MGP_BALBcJ_P0038792 Ankrd28 protein_coding protein_coding MGP_BALBcJ_T0038795.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24500218 24505262 - MGP_BALBcJ_P0038795 Dph3 protein_coding protein_coding MGP_BALBcJ_T0038796.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24500221 24505262 - MGP_BALBcJ_P0038796 Dph3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038797.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24500221 24505262 - MGP_BALBcJ_P0038797 Dph3 protein_coding protein_coding MGP_BALBcJ_T0038798.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24502410 24505262 - MGP_BALBcJ_P0038798 Dph3 protein_coding protein_coding MGP_BALBcJ_T0038799.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24502524 24505345 - Dph3 protein_coding processed_transcript MGP_BALBcJ_T0038800.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24502528 24504939 - Dph3 protein_coding retained_intron MGP_BALBcJ_T0038801.1 MGP_BALBcJ_G0021088.1 mouse_genomes_project 14 24504348 24505262 - MGP_BALBcJ_P0038801 Dph3 protein_coding protein_coding MGP_BALBcJ_T0038990.1 MGP_BALBcJ_G0021159.1 mouse_genomes_project 14 37892566 37905521 - MGP_BALBcJ_P0038990 Gnpnat1 protein_coding protein_coding MGP_BALBcJ_T0039854.1 MGP_BALBcJ_G0021445.1 mouse_genomes_project 14 58551982 58576657 - MGP_BALBcJ_P0039854 Pnoc protein_coding protein_coding MGP_BALBcJ_T0040086.1 MGP_BALBcJ_G0021527.1 mouse_genomes_project 14 67678214 67744865 + MGP_BALBcJ_P0040086 Htr2a protein_coding protein_coding MGP_BALBcJ_T0039480.1 MGP_BALBcJ_G0021305.1 mouse_genomes_project 14 48219477 48235267 + MGP_BALBcJ_P0039480 Dhrs2 protein_coding protein_coding MGP_BALBcJ_T0039481.1 MGP_BALBcJ_G0021305.1 mouse_genomes_project 14 48228573 48235080 + MGP_BALBcJ_P0039481 Dhrs2 protein_coding protein_coding MGP_BALBcJ_T0002503.1 MGP_BALBcJ_G0002408.1 mouse_genomes_project 14 47154084 47154150 + MGP_BALBcJ_P0002503 Traj52 TR_J_gene TR_J_gene MGP_BALBcJ_T0038825.1 MGP_BALBcJ_G0021093.1 mouse_genomes_project 14 24621066 24644216 - MGP_BALBcJ_P0038825 Timm23 protein_coding protein_coding MGP_BALBcJ_T0038826.1 MGP_BALBcJ_G0021093.1 mouse_genomes_project 14 24621800 24644164 - MGP_BALBcJ_P0038826 Timm23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038827.1 MGP_BALBcJ_G0021093.1 mouse_genomes_project 14 24632941 24644146 - Timm23 protein_coding retained_intron MGP_BALBcJ_T0038828.1 MGP_BALBcJ_G0021093.1 mouse_genomes_project 14 24635458 24644171 - Timm23 protein_coding retained_intron MGP_BALBcJ_T0038829.1 MGP_BALBcJ_G0021093.1 mouse_genomes_project 14 24640790 24644197 - Timm23 protein_coding retained_intron MGP_BALBcJ_T0009973.1 MGP_BALBcJ_G0008098.1 mouse_genomes_project 14 55972052 55972189 + Mir8098 miRNA miRNA MGP_BALBcJ_T0009958.1 MGP_BALBcJ_G0008083.1 mouse_genomes_project 14 22914059 22914119 + Mir3076 miRNA miRNA MGP_BALBcJ_T0040313.1 MGP_BALBcJ_G0021612.1 mouse_genomes_project 14 111814324 111835504 - MGP_BALBcJ_P0040313 Tgds protein_coding protein_coding MGP_BALBcJ_T0038601.1 MGP_BALBcJ_G0021043.1 mouse_genomes_project 14 19564513 19730985 + MGP_BALBcJ_P0038601 Arhgef3 protein_coding protein_coding MGP_BALBcJ_T0038602.1 MGP_BALBcJ_G0021043.1 mouse_genomes_project 14 19664232 19731000 + MGP_BALBcJ_P0038602 Arhgef3 protein_coding unknown_likely_coding MGP_BALBcJ_T0000924.1 MGP_BALBcJ_G0000855.1 mouse_genomes_project 14 110449719 110450634 + TEC TEC MGP_BALBcJ_T0040154.1 MGP_BALBcJ_G0021549.1 mouse_genomes_project 14 70234109 70808206 + MGP_BALBcJ_P0040154 Enox1 protein_coding protein_coding MGP_BALBcJ_T0039497.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48552854 48562914 + MGP_BALBcJ_P0039497 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039498.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48552866 48554290 + MGP_BALBcJ_P0039498 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039499.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48552869 48553605 + Dcaf11 protein_coding processed_transcript MGP_BALBcJ_T0039500.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48552873 48555782 + MGP_BALBcJ_P0039500 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039501.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48552910 48562913 + MGP_BALBcJ_P0039501 Dcaf11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039502.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48552969 48562384 + Dcaf11 protein_coding retained_intron MGP_BALBcJ_T0039503.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553330 48553948 + Dcaf11 protein_coding processed_transcript MGP_BALBcJ_T0039504.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553360 48562780 + MGP_BALBcJ_P0039504 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039505.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553366 48554292 + MGP_BALBcJ_P0039505 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039506.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553381 48557252 + MGP_BALBcJ_P0039506 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039507.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553382 48562910 + MGP_BALBcJ_P0039507 Dcaf11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039508.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553777 48562911 + MGP_BALBcJ_P0039508 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039509.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553819 48556629 + MGP_BALBcJ_P0039509 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039510.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553832 48562913 + Dcaf11 protein_coding retained_intron MGP_BALBcJ_T0039511.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553915 48562780 + MGP_BALBcJ_P0039511 Dcaf11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039512.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48553915 48562780 + MGP_BALBcJ_P0039512 Dcaf11 protein_coding protein_coding MGP_BALBcJ_T0039513.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48557239 48557692 + Dcaf11 protein_coding retained_intron MGP_BALBcJ_T0039514.1 MGP_BALBcJ_G0021312.1 mouse_genomes_project 14 48558710 48562238 + Dcaf11 protein_coding processed_transcript MGP_BALBcJ_T0039630.1 MGP_BALBcJ_G0021354.1 mouse_genomes_project 14 49439339 49462804 + MGP_BALBcJ_P0039630 Atp12a protein_coding protein_coding MGP_BALBcJ_T0040194.1 MGP_BALBcJ_G0021570.1 mouse_genomes_project 14 77708028 77801321 + MGP_BALBcJ_P0040194 Pcdh17 protein_coding protein_coding MGP_BALBcJ_T0002639.1 MGP_BALBcJ_G0002527.1 mouse_genomes_project 14 46879327 46879939 + MGP_BALBcJ_P0002639 Trdv1 TR_V_gene TR_V_gene MGP_BALBcJ_T0002640.1 MGP_BALBcJ_G0002527.1 mouse_genomes_project 14 46879327 46879939 + MGP_BALBcJ_P0002640 Trdv1 TR_V_gene TR_V_gene MGP_BALBcJ_T0039752.1 MGP_BALBcJ_G0021398.1 mouse_genomes_project 14 53881186 53893799 + MGP_BALBcJ_P0039752 C1qtnf9 protein_coding protein_coding MGP_BALBcJ_T0040339.1 MGP_BALBcJ_G0021621.1 mouse_genomes_project 14 112862006 113604179 + MGP_BALBcJ_P0040339 Hs6st3 protein_coding protein_coding MGP_BALBcJ_T0006693.1 MGP_BALBcJ_G0005527.1 mouse_genomes_project 14 55893231 55964456 + 4931440J10Rik lincRNA lincRNA MGP_BALBcJ_T0003554.1 MGP_BALBcJ_G0003230.1 mouse_genomes_project 14 62581764 62585127 - Gm27221 antisense antisense MGP_BALBcJ_T0038325.1 MGP_BALBcJ_G0020969.1 mouse_genomes_project 14 10018116 10396649 + MGP_BALBcJ_P0038325 Thrb protein_coding protein_coding MGP_BALBcJ_T0038326.1 MGP_BALBcJ_G0020969.1 mouse_genomes_project 14 10018116 10398178 + MGP_BALBcJ_P0038326 Thrb protein_coding protein_coding MGP_BALBcJ_T0038327.1 MGP_BALBcJ_G0020969.1 mouse_genomes_project 14 10341660 10398176 + MGP_BALBcJ_P0038327 Thrb protein_coding protein_coding MGP_BALBcJ_T0039024.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39414292 39643881 + MGP_BALBcJ_P0039024 Samd4 protein_coding protein_coding MGP_BALBcJ_T0039025.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39414403 39646842 + MGP_BALBcJ_P0039025 Samd4 protein_coding protein_coding MGP_BALBcJ_T0039026.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39414944 39416008 + Samd4 protein_coding processed_transcript MGP_BALBcJ_T0039027.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39415536 39646836 + MGP_BALBcJ_P0039027 Samd4 protein_coding protein_coding MGP_BALBcJ_T0039028.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39540493 39542409 + Samd4 protein_coding processed_transcript MGP_BALBcJ_T0039029.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39540500 39642370 + MGP_BALBcJ_P0039029 Samd4 protein_coding protein_coding MGP_BALBcJ_T0039030.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39555285 39642195 + MGP_BALBcJ_P0039030 Samd4 protein_coding protein_coding MGP_BALBcJ_T0039031.1 MGP_BALBcJ_G0021168.1 mouse_genomes_project 14 39627895 39629863 + Samd4 protein_coding processed_transcript MGP_BALBcJ_T0038944.1 MGP_BALBcJ_G0021138.1 mouse_genomes_project 14 29535375 29541979 + MGP_BALBcJ_P0038944 Lrit2 protein_coding protein_coding MGP_BALBcJ_T0039373.1 MGP_BALBcJ_G0021274.1 mouse_genomes_project 14 47456574 47460884 + MGP_BALBcJ_P0039373 Rem2 protein_coding protein_coding MGP_BALBcJ_T0039374.1 MGP_BALBcJ_G0021274.1 mouse_genomes_project 14 47456716 47458371 + Rem2 protein_coding retained_intron MGP_BALBcJ_T0039375.1 MGP_BALBcJ_G0021274.1 mouse_genomes_project 14 47456728 47460130 + MGP_BALBcJ_P0039375 Rem2 protein_coding protein_coding MGP_BALBcJ_T0039376.1 MGP_BALBcJ_G0021274.1 mouse_genomes_project 14 47457947 47459568 + MGP_BALBcJ_P0039376 Rem2 protein_coding protein_coding MGP_BALBcJ_T0038856.1 MGP_BALBcJ_G0021106.1 mouse_genomes_project 14 25440355 25464208 + MGP_BALBcJ_P0038856 Lrrc18 protein_coding protein_coding MGP_BALBcJ_T0038857.1 MGP_BALBcJ_G0021106.1 mouse_genomes_project 14 25440371 25458312 + MGP_BALBcJ_P0038857 Lrrc18 protein_coding protein_coding MGP_BALBcJ_T0038858.1 MGP_BALBcJ_G0021106.1 mouse_genomes_project 14 25440376 25457594 + MGP_BALBcJ_P0038858 Lrrc18 protein_coding protein_coding MGP_BALBcJ_T0038859.1 MGP_BALBcJ_G0021106.1 mouse_genomes_project 14 25440419 25457755 + MGP_BALBcJ_P0038859 Lrrc18 protein_coding protein_coding MGP_BALBcJ_T0038860.1 MGP_BALBcJ_G0021106.1 mouse_genomes_project 14 25440431 25463071 + MGP_BALBcJ_P0038860 Lrrc18 protein_coding protein_coding MGP_BALBcJ_T0038861.1 MGP_BALBcJ_G0021106.1 mouse_genomes_project 14 25444254 25457375 + Lrrc18 protein_coding processed_transcript MGP_BALBcJ_T0099429.1 MGP_BALBcJ_G0037465.1 mouse_genomes_project 14 89948946 89949062 + Gm24043 snRNA snRNA MGP_BALBcJ_T0038358.1 MGP_BALBcJ_G0020977.1 mouse_genomes_project 14 12359664 12372714 - MGP_BALBcJ_P0038358 2700060E02Rik protein_coding protein_coding MGP_BALBcJ_T0038964.1 MGP_BALBcJ_G0021147.1 mouse_genomes_project 14 33575389 33594672 + MGP_BALBcJ_P0038964 Dydc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038965.1 MGP_BALBcJ_G0021147.1 mouse_genomes_project 14 33575389 33594679 + MGP_BALBcJ_P0038965 Dydc1 protein_coding protein_coding MGP_BALBcJ_T0038966.1 MGP_BALBcJ_G0021147.1 mouse_genomes_project 14 33575418 33594675 + MGP_BALBcJ_P0038966 Dydc1 protein_coding protein_coding MGP_BALBcJ_T0013017.1 MGP_BALBcJ_G0011114.1 mouse_genomes_project 14 107171389 107171831 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040038.1 MGP_BALBcJ_G0021516.1 mouse_genomes_project 14 63922104 64014801 + MGP_BALBcJ_P0040038 Gfra2 protein_coding protein_coding MGP_BALBcJ_T0038375.1 MGP_BALBcJ_G0020986.1 mouse_genomes_project 14 12950078 12952343 - MGP_BALBcJ_P0038375 Mrps16 protein_coding protein_coding MGP_BALBcJ_T0039620.1 MGP_BALBcJ_G0021344.1 mouse_genomes_project 14 49108929 49121072 - MGP_BALBcJ_P0039620 Mcpt4 protein_coding protein_coding MGP_BALBcJ_T0038615.1 MGP_BALBcJ_G0021050.1 mouse_genomes_project 14 22293453 22300485 + MGP_BALBcJ_P0038615 Selk protein_coding protein_coding MGP_BALBcJ_T0038616.1 MGP_BALBcJ_G0021050.1 mouse_genomes_project 14 22293581 22298743 + Selk protein_coding processed_transcript MGP_BALBcJ_T0039290.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45186856 45204151 - MGP_BALBcJ_P0039290 Rab2b protein_coding protein_coding MGP_BALBcJ_T0039291.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45186863 45203904 - MGP_BALBcJ_P0039291 Rab2b protein_coding protein_coding MGP_BALBcJ_T0039292.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45186866 45193470 - Rab2b protein_coding retained_intron MGP_BALBcJ_T0039293.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45186868 45203945 - MGP_BALBcJ_P0039293 Rab2b protein_coding protein_coding MGP_BALBcJ_T0039294.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45188820 45203279 - Rab2b protein_coding processed_transcript MGP_BALBcJ_T0039295.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45188820 45203847 - MGP_BALBcJ_P0039295 Rab2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039296.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45188820 45203847 - MGP_BALBcJ_P0039296 Rab2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039297.1 MGP_BALBcJ_G0021255.1 mouse_genomes_project 14 45189860 45199769 - MGP_BALBcJ_P0039297 Rab2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012989.1 MGP_BALBcJ_G0011086.1 mouse_genomes_project 14 49953895 49954965 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009967.1 MGP_BALBcJ_G0008092.1 mouse_genomes_project 14 47971494 47971571 - Mir208b miRNA miRNA MGP_BALBcJ_T0039137.1 MGP_BALBcJ_G0021201.1 mouse_genomes_project 14 43093753 43094692 + MGP_BALBcJ_P0039137 Olfr736 protein_coding protein_coding MGP_BALBcJ_T0099401.1 MGP_BALBcJ_G0037437.1 mouse_genomes_project 14 26097278 26097385 + Gm26228 snRNA snRNA MGP_BALBcJ_T0039607.1 MGP_BALBcJ_G0021335.1 mouse_genomes_project 14 48807566 48811428 - MGP_BALBcJ_P0039607 Ripk3 protein_coding protein_coding MGP_BALBcJ_T0039608.1 MGP_BALBcJ_G0021335.1 mouse_genomes_project 14 48807767 48811207 - MGP_BALBcJ_P0039608 Ripk3 protein_coding protein_coding MGP_BALBcJ_T0040150.1 MGP_BALBcJ_G0021548.1 mouse_genomes_project 14 70129002 70191977 + MGP_BALBcJ_P0040150 Ccdc122 protein_coding protein_coding MGP_BALBcJ_T0040151.1 MGP_BALBcJ_G0021548.1 mouse_genomes_project 14 70129012 70191977 + MGP_BALBcJ_P0040151 Ccdc122 protein_coding protein_coding MGP_BALBcJ_T0040152.1 MGP_BALBcJ_G0021548.1 mouse_genomes_project 14 70129094 70191468 + MGP_BALBcJ_P0040152 Ccdc122 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040153.1 MGP_BALBcJ_G0021548.1 mouse_genomes_project 14 70190747 70192030 + Ccdc122 protein_coding processed_transcript MGP_BALBcJ_T0039869.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59134320 59147380 + MGP_BALBcJ_P0039869 Clu protein_coding protein_coding MGP_BALBcJ_T0039870.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59134479 59141477 + MGP_BALBcJ_P0039870 Clu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039871.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59134491 59138366 + Clu protein_coding retained_intron MGP_BALBcJ_T0039872.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59135555 59141792 + MGP_BALBcJ_P0039872 Clu protein_coding protein_coding MGP_BALBcJ_T0039873.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59136457 59141696 + MGP_BALBcJ_P0039873 Clu protein_coding protein_coding MGP_BALBcJ_T0039874.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59136633 59141673 + MGP_BALBcJ_P0039874 Clu protein_coding protein_coding MGP_BALBcJ_T0039875.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59136885 59141608 + MGP_BALBcJ_P0039875 Clu protein_coding protein_coding MGP_BALBcJ_T0039876.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59137130 59140793 + MGP_BALBcJ_P0039876 Clu protein_coding protein_coding MGP_BALBcJ_T0039877.1 MGP_BALBcJ_G0021453.1 mouse_genomes_project 14 59140499 59141805 + Clu protein_coding retained_intron MGP_BALBcJ_T0039589.1 MGP_BALBcJ_G0021325.1 mouse_genomes_project 14 48680998 48689637 + MGP_BALBcJ_P0039589 Gmpr2 protein_coding protein_coding MGP_BALBcJ_T0039972.1 MGP_BALBcJ_G0021491.1 mouse_genomes_project 14 62799882 62820962 - MGP_BALBcJ_P0039972 Rhobtb2 protein_coding protein_coding MGP_BALBcJ_T0040241.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95293380 95459899 + MGP_BALBcJ_P0040241 Lmo7 protein_coding protein_coding MGP_BALBcJ_T0040242.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95293380 95501988 + MGP_BALBcJ_P0040242 Lmo7 protein_coding protein_coding MGP_BALBcJ_T0040243.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95393224 95447211 + Lmo7 protein_coding processed_transcript MGP_BALBcJ_T0040244.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95402768 95501983 + MGP_BALBcJ_P0040244 Lmo7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040245.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95404553 95450794 + Lmo7 protein_coding processed_transcript MGP_BALBcJ_T0040246.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95404763 95452213 + Lmo7 protein_coding retained_intron MGP_BALBcJ_T0040247.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95405075 95479121 + Lmo7 protein_coding retained_intron MGP_BALBcJ_T0040248.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95435461 95450597 + Lmo7 protein_coding processed_transcript MGP_BALBcJ_T0040249.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95442808 95501820 + MGP_BALBcJ_P0040249 Lmo7 protein_coding protein_coding MGP_BALBcJ_T0040250.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95447220 95501489 + MGP_BALBcJ_P0040250 Lmo7 protein_coding protein_coding MGP_BALBcJ_T0040251.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95450466 95466539 + Lmo7 protein_coding retained_intron MGP_BALBcJ_T0040252.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95450498 95454580 + Lmo7 protein_coding retained_intron MGP_BALBcJ_T0040253.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95485510 95498054 + Lmo7 protein_coding retained_intron MGP_BALBcJ_T0040254.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95493596 95500431 + Lmo7 protein_coding processed_transcript MGP_BALBcJ_T0040255.1 MGP_BALBcJ_G0021589.1 mouse_genomes_project 14 95496554 95500160 + Lmo7 protein_coding processed_transcript MGP_BALBcJ_T0039835.1 MGP_BALBcJ_G0021438.1 mouse_genomes_project 14 57813630 57969440 + MGP_BALBcJ_P0039835 Kif13b protein_coding protein_coding MGP_BALBcJ_T0039836.1 MGP_BALBcJ_G0021438.1 mouse_genomes_project 14 57813701 57972764 + MGP_BALBcJ_P0039836 Kif13b protein_coding unknown_likely_coding MGP_BALBcJ_T0009985.1 MGP_BALBcJ_G0008110.1 mouse_genomes_project 14 68316104 68316207 + Gm44482 miRNA miRNA MGP_BALBcJ_T0002572.1 MGP_BALBcJ_G0002473.1 mouse_genomes_project 14 47194125 47194159 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0040352.1 MGP_BALBcJ_G0021629.1 mouse_genomes_project 14 115293862 115453403 - MGP_BALBcJ_P0040352 Dock9 protein_coding protein_coding MGP_BALBcJ_T0040353.1 MGP_BALBcJ_G0021629.1 mouse_genomes_project 14 115293862 115559857 - MGP_BALBcJ_P0040353 Dock9 protein_coding protein_coding MGP_BALBcJ_T0040354.1 MGP_BALBcJ_G0021629.1 mouse_genomes_project 14 115295326 115345424 - MGP_BALBcJ_P0040354 Dock9 protein_coding unknown_likely_coding MGP_BALBcJ_T0040355.1 MGP_BALBcJ_G0021629.1 mouse_genomes_project 14 115346867 115499044 - MGP_BALBcJ_P0040355 Dock9 protein_coding unknown_likely_coding MGP_BALBcJ_T0002592.1 MGP_BALBcJ_G0002489.1 mouse_genomes_project 14 45581889 45582334 + MGP_BALBcJ_P0002592 Trav6-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0039693.1 MGP_BALBcJ_G0021380.1 mouse_genomes_project 14 51185964 51228014 + MGP_BALBcJ_P0039693 Fgf9 protein_coding protein_coding MGP_BALBcJ_T0039694.1 MGP_BALBcJ_G0021380.1 mouse_genomes_project 14 51188399 51225880 + MGP_BALBcJ_P0039694 Fgf9 protein_coding protein_coding MGP_BALBcJ_T0039695.1 MGP_BALBcJ_G0021380.1 mouse_genomes_project 14 51190828 51225880 + MGP_BALBcJ_P0039695 Fgf9 protein_coding protein_coding MGP_BALBcJ_T0039696.1 MGP_BALBcJ_G0021380.1 mouse_genomes_project 14 51192219 51225098 + MGP_BALBcJ_P0039696 Fgf9 protein_coding protein_coding MGP_BALBcJ_T0040343.1 MGP_BALBcJ_G0021624.1 mouse_genomes_project 14 114208669 114240597 + MGP_BALBcJ_P0040343 Rap2a protein_coding protein_coding MGP_BALBcJ_T0040344.1 MGP_BALBcJ_G0021624.1 mouse_genomes_project 14 114237015 114240597 + MGP_BALBcJ_P0040344 Rap2a protein_coding protein_coding MGP_BALBcJ_T0006708.1 MGP_BALBcJ_G0005537.1 mouse_genomes_project 14 72971168 73091531 + Gm6999 lincRNA lincRNA MGP_BALBcJ_T0039625.1 MGP_BALBcJ_G0021349.1 mouse_genomes_project 14 49222123 49233915 - MGP_BALBcJ_P0039625 Gzmg protein_coding protein_coding MGP_BALBcJ_T0040155.1 MGP_BALBcJ_G0021550.1 mouse_genomes_project 14 70883598 70887738 - MGP_BALBcJ_P0040155 Gm1587 protein_coding protein_coding MGP_BALBcJ_T0013012.1 MGP_BALBcJ_G0011109.1 mouse_genomes_project 14 93415594 93415891 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039943.1 MGP_BALBcJ_G0021478.1 mouse_genomes_project 14 62261679 62273777 + MGP_BALBcJ_P0039943 Stc1 protein_coding protein_coding MGP_BALBcJ_T0038989.1 MGP_BALBcJ_G0021158.1 mouse_genomes_project 14 37866536 37889818 + MGP_BALBcJ_P0038989 protein_coding protein_coding MGP_BALBcJ_T0040127.1 MGP_BALBcJ_G0021542.1 mouse_genomes_project 14 69013457 69023643 + MGP_BALBcJ_P0040127 Kctd4 protein_coding protein_coding MGP_BALBcJ_T0040259.1 MGP_BALBcJ_G0021592.1 mouse_genomes_project 14 96618255 96625619 + MGP_BALBcJ_P0040259 Cln5 protein_coding protein_coding MGP_BALBcJ_T0009957.1 MGP_BALBcJ_G0008082.1 mouse_genomes_project 14 22314716 22314781 + Mir6947 miRNA miRNA MGP_BALBcJ_T0039847.1 MGP_BALBcJ_G0021440.1 mouse_genomes_project 14 58113401 58206598 + MGP_BALBcJ_P0039847 Ints9 protein_coding protein_coding MGP_BALBcJ_T0012969.1 MGP_BALBcJ_G0011066.1 mouse_genomes_project 14 24709757 24710913 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0002706.1 MGP_BALBcJ_G0002582.1 mouse_genomes_project 14 46985664 46985967 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0039191.1 MGP_BALBcJ_G0021232.1 mouse_genomes_project 14 43875667 43877722 + MGP_BALBcJ_P0039191 Rnase6 protein_coding protein_coding MGP_BALBcJ_T0039131.1 MGP_BALBcJ_G0021198.1 mouse_genomes_project 14 43005869 43006902 - MGP_BALBcJ_P0039131 Olfr734 protein_coding protein_coding MGP_BALBcJ_T0003514.1 MGP_BALBcJ_G0003196.1 mouse_genomes_project 14 24736481 24738532 - Gm17210 antisense antisense MGP_BALBcJ_T0038987.1 MGP_BALBcJ_G0021156.1 mouse_genomes_project 14 37798806 37833780 - MGP_BALBcJ_P0038987 Ero1l protein_coding protein_coding MGP_BALBcJ_T0006669.1 MGP_BALBcJ_G0005510.1 mouse_genomes_project 14 41253948 41382420 + Otx2os1 lincRNA lincRNA MGP_BALBcJ_T0006670.1 MGP_BALBcJ_G0005510.1 mouse_genomes_project 14 41254824 41306311 + Otx2os1 lincRNA lincRNA MGP_BALBcJ_T0006671.1 MGP_BALBcJ_G0005510.1 mouse_genomes_project 14 41254929 41304243 + Otx2os1 lincRNA lincRNA MGP_BALBcJ_T0002699.1 MGP_BALBcJ_G0002575.1 mouse_genomes_project 14 46166851 46167131 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0098504.1 MGP_BALBcJ_G0036558.1 mouse_genomes_project 14 56008431 56008550 + n-R5s47 rRNA rRNA MGP_BALBcJ_T0000914.1 MGP_BALBcJ_G0000845.1 mouse_genomes_project 14 62510239 62514779 - TEC TEC MGP_BALBcJ_T0017377.1 MGP_BALBcJ_G0015216.1 mouse_genomes_project 14 71160356 71180567 + Gm19301 processed_transcript processed_transcript MGP_BALBcJ_T0000901.1 MGP_BALBcJ_G0000832.1 mouse_genomes_project 14 40310798 40313358 + TEC TEC MGP_BALBcJ_T0038887.1 MGP_BALBcJ_G0021114.1 mouse_genomes_project 14 26428499 26440112 - MGP_BALBcJ_P0038887 Zfp488 protein_coding protein_coding MGP_BALBcJ_T0040039.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65578386 65732301 - MGP_BALBcJ_P0040039 Fndc3a protein_coding protein_coding MGP_BALBcJ_T0040040.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65579969 65646549 - MGP_BALBcJ_P0040040 Fndc3a protein_coding protein_coding MGP_BALBcJ_T0040041.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65602400 65605632 - Fndc3a protein_coding retained_intron MGP_BALBcJ_T0040042.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65605655 65748032 - MGP_BALBcJ_P0040042 Fndc3a protein_coding protein_coding MGP_BALBcJ_T0040043.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65615476 65690320 - MGP_BALBcJ_P0040043 Fndc3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040044.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65641961 65748487 - Fndc3a protein_coding retained_intron MGP_BALBcJ_T0040045.1 MGP_BALBcJ_G0021517.1 mouse_genomes_project 14 65687490 65748333 - Fndc3a protein_coding retained_intron MGP_BALBcJ_T0040016.1 MGP_BALBcJ_G0021508.1 mouse_genomes_project 14 63584528 63587037 + Hr protein_coding processed_transcript MGP_BALBcJ_T0040017.1 MGP_BALBcJ_G0021508.1 mouse_genomes_project 14 63584561 63586983 + Hr protein_coding processed_transcript MGP_BALBcJ_T0040018.1 MGP_BALBcJ_G0021508.1 mouse_genomes_project 14 63586003 63604625 + MGP_BALBcJ_P0040018 Hr protein_coding protein_coding MGP_BALBcJ_T0040019.1 MGP_BALBcJ_G0021508.1 mouse_genomes_project 14 63586372 63605273 + MGP_BALBcJ_P0040019 Hr protein_coding protein_coding MGP_BALBcJ_T0040020.1 MGP_BALBcJ_G0021508.1 mouse_genomes_project 14 63588217 63605269 + MGP_BALBcJ_P0040020 Hr protein_coding protein_coding MGP_BALBcJ_T0038752.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23630063 23638599 + MGP_BALBcJ_P0038752 Bap1 protein_coding protein_coding MGP_BALBcJ_T0038753.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23630116 23631628 + Bap1 protein_coding retained_intron MGP_BALBcJ_T0038754.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23630124 23632815 + Bap1 protein_coding retained_intron MGP_BALBcJ_T0038755.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23630151 23638585 + Bap1 protein_coding retained_intron MGP_BALBcJ_T0038756.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23630193 23633751 + MGP_BALBcJ_P0038756 Bap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038757.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23634923 23637179 + MGP_BALBcJ_P0038757 Bap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038758.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23635193 23636296 + Bap1 protein_coding retained_intron MGP_BALBcJ_T0038759.1 MGP_BALBcJ_G0021077.1 mouse_genomes_project 14 23636145 23637543 + Bap1 protein_coding retained_intron MGP_BALBcJ_T0039936.1 MGP_BALBcJ_G0021474.1 mouse_genomes_project 14 61320991 61326260 + MGP_BALBcJ_P0039936 Nefl protein_coding protein_coding MGP_BALBcJ_T0040070.1 MGP_BALBcJ_G0021520.1 mouse_genomes_project 14 66206049 66303916 - Rb1 protein_coding processed_transcript MGP_BALBcJ_T0040071.1 MGP_BALBcJ_G0021520.1 mouse_genomes_project 14 66210832 66341795 - MGP_BALBcJ_P0040071 Rb1 protein_coding protein_coding MGP_BALBcJ_T0040072.1 MGP_BALBcJ_G0021520.1 mouse_genomes_project 14 66212304 66218597 - Rb1 protein_coding retained_intron MGP_BALBcJ_T0040074.1 MGP_BALBcJ_G0021520.1 mouse_genomes_project 14 66253621 66254862 - Rb1 protein_coding processed_transcript MGP_BALBcJ_T0040075.1 MGP_BALBcJ_G0021520.1 mouse_genomes_project 14 66277995 66279917 - Rb1 protein_coding retained_intron MGP_BALBcJ_T0040076.1 MGP_BALBcJ_G0021520.1 mouse_genomes_project 14 66295697 66341614 - MGP_BALBcJ_P0040076 Rb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039334.1 MGP_BALBcJ_G0021265.1 mouse_genomes_project 14 45437077 45442786 - MGP_BALBcJ_P0039334 Olfr1507 protein_coding protein_coding MGP_BALBcJ_T0039335.1 MGP_BALBcJ_G0021265.1 mouse_genomes_project 14 45437077 45438189 - MGP_BALBcJ_P0039335 Olfr1507 protein_coding protein_coding MGP_BALBcJ_T0039336.1 MGP_BALBcJ_G0021265.1 mouse_genomes_project 14 45437620 45442388 - MGP_BALBcJ_P0039336 Olfr1507 protein_coding protein_coding MGP_BALBcJ_T0039337.1 MGP_BALBcJ_G0021265.1 mouse_genomes_project 14 45437632 45442782 - MGP_BALBcJ_P0039337 Olfr1507 protein_coding protein_coding MGP_BALBcJ_T0039338.1 MGP_BALBcJ_G0021265.1 mouse_genomes_project 14 45437641 45442416 - MGP_BALBcJ_P0039338 Olfr1507 protein_coding protein_coding MGP_BALBcJ_T0039339.1 MGP_BALBcJ_G0021265.1 mouse_genomes_project 14 45438037 45442780 - MGP_BALBcJ_P0039339 Olfr1507 protein_coding protein_coding MGP_BALBcJ_T0101628.1 MGP_BALBcJ_G0039638.1 mouse_genomes_project 14 40777009 40806088 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101629.1 MGP_BALBcJ_G0039638.1 mouse_genomes_project 14 40804919 40805881 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0006654.1 MGP_BALBcJ_G0005497.1 mouse_genomes_project 14 18695893 18707880 + lincRNA lincRNA MGP_BALBcJ_T0006706.1 MGP_BALBcJ_G0005536.1 mouse_genomes_project 14 70560180 70588866 - Gm6994 lincRNA lincRNA MGP_BALBcJ_T0006707.1 MGP_BALBcJ_G0005536.1 mouse_genomes_project 14 70560793 70582156 - Gm6994 lincRNA lincRNA MGP_BALBcJ_T0038972.1 MGP_BALBcJ_G0021152.1 mouse_genomes_project 14 37349242 37363431 - MGP_BALBcJ_P0038972 Ptgdr protein_coding protein_coding MGP_BALBcJ_T0003497.1 MGP_BALBcJ_G0003186.1 mouse_genomes_project 14 13103442 13122342 + 1810062O18Rik antisense antisense MGP_BALBcJ_T0003498.1 MGP_BALBcJ_G0003186.1 mouse_genomes_project 14 13103477 13127880 + 1810062O18Rik antisense antisense MGP_BALBcJ_T0003499.1 MGP_BALBcJ_G0003186.1 mouse_genomes_project 14 13103620 13122310 + 1810062O18Rik antisense antisense MGP_BALBcJ_T0003500.1 MGP_BALBcJ_G0003186.1 mouse_genomes_project 14 13103656 13128017 + 1810062O18Rik antisense antisense MGP_BALBcJ_T0003501.1 MGP_BALBcJ_G0003186.1 mouse_genomes_project 14 13122347 13128024 + 1810062O18Rik antisense antisense MGP_BALBcJ_T0038830.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644266 24685927 + Parg protein_coding retained_intron MGP_BALBcJ_T0038831.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644266 24740816 + MGP_BALBcJ_P0038831 Parg protein_coding protein_coding MGP_BALBcJ_T0038832.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644266 24739207 + MGP_BALBcJ_P0038832 Parg protein_coding protein_coding MGP_BALBcJ_T0038833.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644266 24741146 + MGP_BALBcJ_P0038833 Parg protein_coding protein_coding MGP_BALBcJ_T0038834.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644288 24651793 + MGP_BALBcJ_P0038834 Parg protein_coding protein_coding MGP_BALBcJ_T0038835.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644349 24740816 + MGP_BALBcJ_P0038835 Parg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038836.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24644753 24651744 + Parg protein_coding processed_transcript MGP_BALBcJ_T0038837.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24656958 24685092 + MGP_BALBcJ_P0038837 Parg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038838.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24684999 24705899 + Parg protein_coding processed_transcript MGP_BALBcJ_T0038839.1 MGP_BALBcJ_G0021094.1 mouse_genomes_project 14 24718979 24739940 + Parg protein_coding processed_transcript MGP_BALBcJ_T0038368.1 MGP_BALBcJ_G0020982.1 mouse_genomes_project 14 12855582 12875359 + MGP_BALBcJ_P0038368 Nudt13 protein_coding unknown_likely_coding MGP_BALBcJ_T0038764.1 MGP_BALBcJ_G0021080.1 mouse_genomes_project 14 23739844 23816544 - MGP_BALBcJ_P0038764 Sh3bp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038765.1 MGP_BALBcJ_G0021080.1 mouse_genomes_project 14 23753936 23797954 - MGP_BALBcJ_P0038765 Sh3bp5 protein_coding protein_coding MGP_BALBcJ_T0038766.1 MGP_BALBcJ_G0021080.1 mouse_genomes_project 14 23753936 23816531 - MGP_BALBcJ_P0038766 Sh3bp5 protein_coding protein_coding MGP_BALBcJ_T0038767.1 MGP_BALBcJ_G0021080.1 mouse_genomes_project 14 23757746 23787662 - Sh3bp5 protein_coding processed_transcript MGP_BALBcJ_T0039452.1 MGP_BALBcJ_G0021299.1 mouse_genomes_project 14 47972715 47972806 + MGP_BALBcJ_P0039452 Gm17428 protein_coding protein_coding MGP_BALBcJ_T0003494.1 MGP_BALBcJ_G0003184.1 mouse_genomes_project 14 6294239 6328340 + Gm11100 antisense antisense MGP_BALBcJ_T0003495.1 MGP_BALBcJ_G0003184.1 mouse_genomes_project 14 6309718 6328340 + Gm11100 antisense antisense MGP_BALBcJ_T0039976.1 MGP_BALBcJ_G0021495.1 mouse_genomes_project 14 63161626 63177261 - MGP_BALBcJ_P0039976 Ccar2 protein_coding protein_coding MGP_BALBcJ_T0002494.1 MGP_BALBcJ_G0002401.1 mouse_genomes_project 14 47115191 47115242 + MGP_BALBcJ_P0002494 Trdj1 TR_J_gene TR_J_gene MGP_BALBcJ_T0099407.1 MGP_BALBcJ_G0037443.1 mouse_genomes_project 14 41356356 41356461 - Gm22699 snRNA snRNA MGP_BALBcJ_T0038405.1 MGP_BALBcJ_G0020994.1 mouse_genomes_project 14 13234307 13255005 + MGP_BALBcJ_P0038405 Sec24c protein_coding protein_coding MGP_BALBcJ_T0038406.1 MGP_BALBcJ_G0020994.1 mouse_genomes_project 14 13234312 13255012 + MGP_BALBcJ_P0038406 Sec24c protein_coding unknown_likely_coding MGP_BALBcJ_T0038302.1 MGP_BALBcJ_G0020962.1 mouse_genomes_project 14 7092799 7197687 + MGP_BALBcJ_P0038302 Slc4a7 protein_coding protein_coding MGP_BALBcJ_T0099439.1 MGP_BALBcJ_G0037475.1 mouse_genomes_project 14 99807741 99807872 - Gm23459 snRNA snRNA MGP_BALBcJ_T0040179.1 MGP_BALBcJ_G0021564.1 mouse_genomes_project 14 72597580 72713055 + MGP_BALBcJ_P0040179 Elf1 protein_coding protein_coding MGP_BALBcJ_T0040180.1 MGP_BALBcJ_G0021564.1 mouse_genomes_project 14 72637460 72713054 + MGP_BALBcJ_P0040180 Elf1 protein_coding protein_coding MGP_BALBcJ_T0002591.1 MGP_BALBcJ_G0002488.1 mouse_genomes_project 14 45571833 45572350 + MGP_BALBcJ_P0002591 Trav5-1 TR_V_gene TR_V_gene MGP_BALBcJ_T0039353.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47350345 47390055 - MGP_BALBcJ_P0039353 Slc7a7 protein_coding protein_coding MGP_BALBcJ_T0039354.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47350347 47398005 - MGP_BALBcJ_P0039354 Slc7a7 protein_coding protein_coding MGP_BALBcJ_T0039355.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47350348 47390790 - MGP_BALBcJ_P0039355 Slc7a7 protein_coding protein_coding MGP_BALBcJ_T0039356.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47354255 47364662 - Slc7a7 protein_coding processed_transcript MGP_BALBcJ_T0039357.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47354704 47378711 - Slc7a7 protein_coding processed_transcript MGP_BALBcJ_T0039358.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47359492 47391174 - MGP_BALBcJ_P0039358 Slc7a7 protein_coding protein_coding MGP_BALBcJ_T0039359.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47389413 47392740 - MGP_BALBcJ_P0039359 Slc7a7 protein_coding protein_coding MGP_BALBcJ_T0039360.1 MGP_BALBcJ_G0021270.1 mouse_genomes_project 14 47389550 47398086 - MGP_BALBcJ_P0039360 Slc7a7 protein_coding protein_coding MGP_BALBcJ_T0098712.1 MGP_BALBcJ_G0036766.1 mouse_genomes_project 14 43535568 43535866 - Rpph1 ribozyme ribozyme MGP_BALBcJ_T0009993.1 MGP_BALBcJ_G0008118.1 mouse_genomes_project 14 99184980 99185109 - Mir6390 miRNA miRNA MGP_BALBcJ_T0099444.1 MGP_BALBcJ_G0037480.1 mouse_genomes_project 14 112288366 112288466 + Gm23302 snRNA snRNA MGP_BALBcJ_T0006716.1 MGP_BALBcJ_G0005544.1 mouse_genomes_project 14 112438314 112445926 - Gm27198 lincRNA lincRNA MGP_BALBcJ_T0100723.1 MGP_BALBcJ_G0038759.1 mouse_genomes_project 14 102251751 102251869 + Gm24229 snoRNA snoRNA MGP_BALBcJ_T0100715.1 MGP_BALBcJ_G0038751.1 mouse_genomes_project 14 93990148 93990280 + Gm26367 snoRNA snoRNA MGP_BALBcJ_T0039017.1 MGP_BALBcJ_G0021166.1 mouse_genomes_project 14 39333278 39347129 - MGP_BALBcJ_P0039017 Gmfb protein_coding protein_coding MGP_BALBcJ_T0039018.1 MGP_BALBcJ_G0021166.1 mouse_genomes_project 14 39333278 39347129 - MGP_BALBcJ_P0039018 Gmfb protein_coding protein_coding MGP_BALBcJ_T0039019.1 MGP_BALBcJ_G0021166.1 mouse_genomes_project 14 39339402 39344711 - MGP_BALBcJ_P0039019 Gmfb protein_coding protein_coding MGP_BALBcJ_T0038618.1 MGP_BALBcJ_G0021052.1 mouse_genomes_project 14 22321969 22334639 - MGP_BALBcJ_P0038618 Il17rb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038619.1 MGP_BALBcJ_G0021052.1 mouse_genomes_project 14 22321996 22334722 - MGP_BALBcJ_P0038619 Il17rb protein_coding protein_coding MGP_BALBcJ_T0038620.1 MGP_BALBcJ_G0021052.1 mouse_genomes_project 14 22321996 22334722 - MGP_BALBcJ_P0038620 Il17rb protein_coding protein_coding MGP_BALBcJ_T0038621.1 MGP_BALBcJ_G0021052.1 mouse_genomes_project 14 22322027 22334635 - MGP_BALBcJ_P0038621 Il17rb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038622.1 MGP_BALBcJ_G0021052.1 mouse_genomes_project 14 22322452 22334617 - MGP_BALBcJ_P0038622 Il17rb protein_coding unknown_likely_coding MGP_BALBcJ_T0102233.1 MGP_BALBcJ_G0040049.1 mouse_genomes_project 14 11205488 11205636 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002548.1 MGP_BALBcJ_G0002451.1 mouse_genomes_project 14 47205329 47205392 + MGP_BALBcJ_P0002548 Traj4 TR_J_gene TR_J_gene MGP_BALBcJ_T0038286.1 MGP_BALBcJ_G0020953.1 mouse_genomes_project 14 6026126 6038399 + MGP_BALBcJ_P0038286 Sntn protein_coding protein_coding MGP_BALBcJ_T0003511.1 MGP_BALBcJ_G0003193.1 mouse_genomes_project 14 18947753 18957741 - Arf4os antisense antisense MGP_BALBcJ_T0000916.1 MGP_BALBcJ_G0000847.1 mouse_genomes_project 14 62629025 62631245 - TEC TEC MGP_BALBcJ_T0002703.1 MGP_BALBcJ_G0002579.1 mouse_genomes_project 14 46757184 46757446 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0038311.1 MGP_BALBcJ_G0020965.1 mouse_genomes_project 14 8628107 8639411 - MGP_BALBcJ_P0038311 Oxsm protein_coding protein_coding MGP_BALBcJ_T0038312.1 MGP_BALBcJ_G0020965.1 mouse_genomes_project 14 8629473 8632890 - MGP_BALBcJ_P0038312 Oxsm protein_coding protein_coding MGP_BALBcJ_T0038313.1 MGP_BALBcJ_G0020965.1 mouse_genomes_project 14 8630192 8638692 - MGP_BALBcJ_P0038313 Oxsm protein_coding protein_coding MGP_BALBcJ_T0038314.1 MGP_BALBcJ_G0020965.1 mouse_genomes_project 14 8631731 8638690 - MGP_BALBcJ_P0038314 Oxsm protein_coding protein_coding MGP_BALBcJ_T0039150.1 MGP_BALBcJ_G0021214.1 mouse_genomes_project 14 43514834 43521248 - MGP_BALBcJ_P0039150 Ccnb1ip1 protein_coding protein_coding MGP_BALBcJ_T0038229.1 MGP_BALBcJ_G0020933.1 mouse_genomes_project 14 84573 85044 + MGP_BALBcJ_P0038229 Gm26661 protein_coding protein_coding MGP_BALBcJ_T0039953.1 MGP_BALBcJ_G0021486.1 mouse_genomes_project 14 62569821 62599670 + MGP_BALBcJ_P0039953 Gm21685 protein_coding unknown_likely_coding MGP_BALBcJ_T0039957.1 MGP_BALBcJ_G0021486.1 mouse_genomes_project 14 62580454 62598716 + MGP_BALBcJ_P0039957 Gm21685 protein_coding protein_coding MGP_BALBcJ_T0039176.1 MGP_BALBcJ_G0021222.1 mouse_genomes_project 14 43679215 43688541 + MGP_BALBcJ_P0039176 Pnp protein_coding protein_coding MGP_BALBcJ_T0039177.1 MGP_BALBcJ_G0021222.1 mouse_genomes_project 14 43679420 43686978 + MGP_BALBcJ_P0039177 Pnp protein_coding protein_coding MGP_BALBcJ_T0039800.1 MGP_BALBcJ_G0021421.1 mouse_genomes_project 14 56273590 56297009 + MGP_BALBcJ_P0039800 Ctsb protein_coding protein_coding MGP_BALBcJ_T0100680.1 MGP_BALBcJ_G0038716.1 mouse_genomes_project 14 25657315 25657444 + Gm25498 snoRNA snoRNA MGP_BALBcJ_T0013013.1 MGP_BALBcJ_G0011110.1 mouse_genomes_project 14 93804329 93804634 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006677.1 MGP_BALBcJ_G0005514.1 mouse_genomes_project 14 44196669 44200111 + lincRNA lincRNA MGP_BALBcJ_T0006678.1 MGP_BALBcJ_G0005514.1 mouse_genomes_project 14 44196733 44199983 + lincRNA lincRNA MGP_BALBcJ_T0006694.1 MGP_BALBcJ_G0005528.1 mouse_genomes_project 14 55971240 55972539 - Gm26536 lincRNA lincRNA MGP_BALBcJ_T0038613.1 MGP_BALBcJ_G0021048.1 mouse_genomes_project 14 21229745 22050044 - MGP_BALBcJ_P0038613 Cacna2d3 protein_coding protein_coding MGP_BALBcJ_T0040120.1 MGP_BALBcJ_G0021538.1 mouse_genomes_project 14 68758711 68812436 - MGP_BALBcJ_P0040120 Cog3 protein_coding protein_coding MGP_BALBcJ_T0038724.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23546780 23582642 - MGP_BALBcJ_P0038724 Nisch protein_coding protein_coding MGP_BALBcJ_T0038725.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23546780 23567244 - MGP_BALBcJ_P0038725 Nisch protein_coding protein_coding MGP_BALBcJ_T0038726.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23547108 23562921 - MGP_BALBcJ_P0038726 Nisch protein_coding protein_coding MGP_BALBcJ_T0038727.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23547216 23550133 - MGP_BALBcJ_P0038727 Nisch protein_coding protein_coding MGP_BALBcJ_T0038728.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23547864 23549579 - MGP_BALBcJ_P0038728 Nisch protein_coding protein_coding MGP_BALBcJ_T0038729.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23550277 23552439 - MGP_BALBcJ_P0038729 Nisch protein_coding protein_coding MGP_BALBcJ_T0038730.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23552746 23579147 - MGP_BALBcJ_P0038730 Nisch protein_coding protein_coding MGP_BALBcJ_T0038731.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23553056 23557184 - MGP_BALBcJ_P0038731 Nisch protein_coding protein_coding MGP_BALBcJ_T0038732.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23553242 23561036 - MGP_BALBcJ_P0038732 Nisch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038733.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23553351 23568333 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0038734.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23553549 23561356 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0038735.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23556563 23558543 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0038736.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23559026 23582667 - MGP_BALBcJ_P0038736 Nisch protein_coding protein_coding MGP_BALBcJ_T0038737.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23559226 23560663 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0038738.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23560724 23567211 - MGP_BALBcJ_P0038738 Nisch protein_coding protein_coding MGP_BALBcJ_T0038739.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23561403 23582459 - MGP_BALBcJ_P0038739 Nisch protein_coding protein_coding MGP_BALBcJ_T0038740.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23561439 23582459 - MGP_BALBcJ_P0038740 Nisch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038741.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23562077 23563166 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0038742.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23562826 23579068 - MGP_BALBcJ_P0038742 Nisch protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038743.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23564053 23566803 - Nisch protein_coding retained_intron MGP_BALBcJ_T0038744.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23576700 23582459 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0038745.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23577622 23582460 - MGP_BALBcJ_P0038745 Nisch protein_coding protein_coding MGP_BALBcJ_T0038746.1 MGP_BALBcJ_G0021073.1 mouse_genomes_project 14 23579062 23592897 - Nisch protein_coding processed_transcript MGP_BALBcJ_T0039149.1 MGP_BALBcJ_G0021213.1 mouse_genomes_project 14 43490712 43511115 - MGP_BALBcJ_P0039149 Ttc5 protein_coding protein_coding MGP_BALBcJ_T0012975.1 MGP_BALBcJ_G0011072.1 mouse_genomes_project 14 38396134 38396568 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038232.1 MGP_BALBcJ_G0020935.1 mouse_genomes_project 14 264088 298548 - MGP_BALBcJ_P0038232 Dnase1l3 protein_coding protein_coding MGP_BALBcJ_T0038233.1 MGP_BALBcJ_G0020935.1 mouse_genomes_project 14 275422 276759 - Dnase1l3 protein_coding processed_transcript MGP_BALBcJ_T0039601.1 MGP_BALBcJ_G0021330.1 mouse_genomes_project 14 48765178 48774983 + MGP_BALBcJ_P0039601 Nop9 protein_coding protein_coding MGP_BALBcJ_T0099418.1 MGP_BALBcJ_G0037454.1 mouse_genomes_project 14 50945189 50945336 - Gm22738 snRNA snRNA MGP_BALBcJ_T0039858.1 MGP_BALBcJ_G0021448.1 mouse_genomes_project 14 58823520 58927479 + MGP_BALBcJ_P0039858 Scara5 protein_coding protein_coding MGP_BALBcJ_T0039859.1 MGP_BALBcJ_G0021448.1 mouse_genomes_project 14 58823554 58906374 + MGP_BALBcJ_P0039859 Scara5 protein_coding protein_coding MGP_BALBcJ_T0039860.1 MGP_BALBcJ_G0021448.1 mouse_genomes_project 14 58834558 58906222 + Scara5 protein_coding processed_transcript MGP_BALBcJ_T0039151.1 MGP_BALBcJ_G0021215.1 mouse_genomes_project 14 43536044 43549158 + MGP_BALBcJ_P0039151 Parp2 protein_coding protein_coding MGP_BALBcJ_T0038963.1 MGP_BALBcJ_G0021146.1 mouse_genomes_project 14 33555691 33571553 - MGP_BALBcJ_P0038963 Dydc2 protein_coding protein_coding MGP_BALBcJ_T0039824.1 MGP_BALBcJ_G0021431.1 mouse_genomes_project 14 57113387 57120446 + MGP_BALBcJ_P0039824 Sox7 protein_coding protein_coding MGP_BALBcJ_T0040026.1 MGP_BALBcJ_G0021512.1 mouse_genomes_project 14 63668515 63674575 - MGP_BALBcJ_P0040026 Fgf17 protein_coding protein_coding MGP_BALBcJ_T0039532.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581245 48584891 - MGP_BALBcJ_P0039532 Psme2 protein_coding protein_coding MGP_BALBcJ_T0039533.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581246 48584905 - MGP_BALBcJ_P0039533 Psme2 protein_coding protein_coding MGP_BALBcJ_T0039534.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581251 48582409 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039535.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581251 48583316 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039536.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581858 48583953 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039537.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581876 48584917 - MGP_BALBcJ_P0039537 Psme2 protein_coding protein_coding MGP_BALBcJ_T0039538.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48581887 48584668 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039539.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48582998 48584777 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039540.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48583121 48584752 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039541.1 MGP_BALBcJ_G0021316.1 mouse_genomes_project 14 48583801 48584699 - Psme2 protein_coding retained_intron MGP_BALBcJ_T0039221.1 MGP_BALBcJ_G0021244.1 mouse_genomes_project 14 44840962 44849189 - MGP_BALBcJ_P0039221 Ndrg2 protein_coding protein_coding MGP_BALBcJ_T0039222.1 MGP_BALBcJ_G0021244.1 mouse_genomes_project 14 44840962 44849189 - MGP_BALBcJ_P0039222 Ndrg2 protein_coding protein_coding MGP_BALBcJ_T0009998.1 MGP_BALBcJ_G0008123.1 mouse_genomes_project 14 108763674 108763770 + Mir18 miRNA miRNA MGP_BALBcJ_T0006658.1 MGP_BALBcJ_G0005501.1 mouse_genomes_project 14 25136604 25138473 + Gm28651 lincRNA lincRNA MGP_BALBcJ_T0009989.1 MGP_BALBcJ_G0008114.1 mouse_genomes_project 14 90585281 90585386 - Gm27441 miRNA miRNA MGP_BALBcJ_T0003535.1 MGP_BALBcJ_G0003215.1 mouse_genomes_project 14 48071138 48073926 + Zfhx2os antisense antisense MGP_BALBcJ_T0002499.1 MGP_BALBcJ_G0002405.1 mouse_genomes_project 14 47143627 47143692 + Traj57 TR_J_gene processed_transcript MGP_BALBcJ_T0002500.1 MGP_BALBcJ_G0002405.1 mouse_genomes_project 14 47143629 47143692 + MGP_BALBcJ_P0002500 Traj57 TR_J_gene TR_J_gene MGP_BALBcJ_T0006691.1 MGP_BALBcJ_G0005526.1 mouse_genomes_project 14 55592742 55596104 - lincRNA lincRNA MGP_BALBcJ_T0006692.1 MGP_BALBcJ_G0005526.1 mouse_genomes_project 14 55594164 55610108 - lincRNA lincRNA MGP_BALBcJ_T0038824.1 MGP_BALBcJ_G0021092.1 mouse_genomes_project 14 24611281 24620150 + MGP_BALBcJ_P0038824 protein_coding protein_coding MGP_BALBcJ_T0006666.1 MGP_BALBcJ_G0005508.1 mouse_genomes_project 14 39106700 39112186 - Rubie lincRNA lincRNA MGP_BALBcJ_T0039483.1 MGP_BALBcJ_G0021307.1 mouse_genomes_project 14 48481724 48498869 + MGP_BALBcJ_P0039483 Lrrc16b protein_coding protein_coding MGP_BALBcJ_T0039484.1 MGP_BALBcJ_G0021307.1 mouse_genomes_project 14 48481875 48498568 + MGP_BALBcJ_P0039484 Lrrc16b protein_coding unknown_likely_coding MGP_BALBcJ_T0000920.1 MGP_BALBcJ_G0000851.1 mouse_genomes_project 14 85921278 85921649 + TEC TEC MGP_BALBcJ_T0002630.1 MGP_BALBcJ_G0002520.1 mouse_genomes_project 14 46739521 46739785 + MGP_BALBcJ_P0002630 TR_V_gene TR_V_gene MGP_BALBcJ_T0039982.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63188740 63192218 - MGP_BALBcJ_P0039982 Pdlim2 protein_coding protein_coding MGP_BALBcJ_T0039983.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63188976 63192352 - MGP_BALBcJ_P0039983 Pdlim2 protein_coding protein_coding MGP_BALBcJ_T0039984.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63188994 63199685 - MGP_BALBcJ_P0039984 Pdlim2 protein_coding protein_coding MGP_BALBcJ_T0039985.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63192142 63199813 - MGP_BALBcJ_P0039985 Pdlim2 protein_coding protein_coding MGP_BALBcJ_T0039986.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63192168 63201199 - Pdlim2 protein_coding retained_intron MGP_BALBcJ_T0039987.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63193790 63199806 - Pdlim2 protein_coding retained_intron MGP_BALBcJ_T0039988.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63195811 63199800 - Pdlim2 protein_coding retained_intron MGP_BALBcJ_T0039989.1 MGP_BALBcJ_G0021497.1 mouse_genomes_project 14 63195889 63196375 - Pdlim2 protein_coding retained_intron MGP_BALBcJ_T0003540.1 MGP_BALBcJ_G0003218.1 mouse_genomes_project 14 49894562 49899811 + 2410022M11Rik antisense antisense MGP_BALBcJ_T0038614.1 MGP_BALBcJ_G0021049.1 mouse_genomes_project 14 21343723 21359142 + MGP_BALBcJ_P0038614 Lrtm1 protein_coding protein_coding MGP_BALBcJ_T0002485.1 MGP_BALBcJ_G0002393.1 mouse_genomes_project 14 47105527 47105536 + MGP_BALBcJ_P0002485 Trdd1 TR_D_gene TR_D_gene MGP_BALBcJ_T0002486.1 MGP_BALBcJ_G0002393.1 mouse_genomes_project 14 47105527 47105538 + Trdd1 TR_D_gene processed_transcript MGP_BALBcJ_T0011344.1 MGP_BALBcJ_G0009469.1 mouse_genomes_project 14 13823055 13823291 + Gm26372 misc_RNA misc_RNA MGP_BALBcJ_T0002643.1 MGP_BALBcJ_G0002529.1 mouse_genomes_project 14 46941705 46942355 + MGP_BALBcJ_P0002643 Trdv2-2 TR_V_gene TR_V_gene MGP_BALBcJ_T0038519.1 MGP_BALBcJ_G0021018.1 mouse_genomes_project 14 18272940 18279253 + Ppif protein_coding retained_intron MGP_BALBcJ_T0038520.1 MGP_BALBcJ_G0021018.1 mouse_genomes_project 14 18272956 18279257 + MGP_BALBcJ_P0038520 Ppif protein_coding protein_coding MGP_BALBcJ_T0039791.1 MGP_BALBcJ_G0021419.1 mouse_genomes_project 14 56180193 56183941 - MGP_BALBcJ_P0039791 Defb30 protein_coding protein_coding MGP_BALBcJ_T0039792.1 MGP_BALBcJ_G0021419.1 mouse_genomes_project 14 56180593 56196382 - MGP_BALBcJ_P0039792 Defb30 protein_coding protein_coding MGP_BALBcJ_T0039793.1 MGP_BALBcJ_G0021419.1 mouse_genomes_project 14 56181917 56196387 - MGP_BALBcJ_P0039793 Defb30 protein_coding protein_coding MGP_BALBcJ_T0039794.1 MGP_BALBcJ_G0021419.1 mouse_genomes_project 14 56182003 56183954 - MGP_BALBcJ_P0039794 Defb30 protein_coding protein_coding MGP_BALBcJ_T0039739.1 MGP_BALBcJ_G0021395.1 mouse_genomes_project 14 53395837 53436562 + MGP_BALBcJ_P0039739 Mtmr6 protein_coding protein_coding MGP_BALBcJ_T0039740.1 MGP_BALBcJ_G0021395.1 mouse_genomes_project 14 53395878 53436572 + MGP_BALBcJ_P0039740 Mtmr6 protein_coding unknown_likely_coding MGP_BALBcJ_T0013010.1 MGP_BALBcJ_G0011107.1 mouse_genomes_project 14 92864449 92864882 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039664.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50694246 50781663 - MGP_BALBcJ_P0039664 protein_coding protein_coding MGP_BALBcJ_T0039665.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50695515 50781189 - MGP_BALBcJ_P0039665 protein_coding protein_coding MGP_BALBcJ_T0039666.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50710277 50781225 - MGP_BALBcJ_P0039666 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039667.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50744982 50781189 - MGP_BALBcJ_P0039667 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039668.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50757627 50781197 - protein_coding processed_transcript MGP_BALBcJ_T0039669.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50757633 50781468 - protein_coding retained_intron MGP_BALBcJ_T0039670.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50757648 50781200 - protein_coding retained_intron MGP_BALBcJ_T0039671.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50757877 50781663 - MGP_BALBcJ_P0039671 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039673.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50758364 50764506 - protein_coding retained_intron MGP_BALBcJ_T0039674.1 MGP_BALBcJ_G0021373.1 mouse_genomes_project 14 50763810 50781222 - protein_coding retained_intron MGP_BALBcJ_T0038664.1 MGP_BALBcJ_G0021061.1 mouse_genomes_project 14 23231537 23233954 + MGP_BALBcJ_P0038664 Mustn1 protein_coding protein_coding MGP_BALBcJ_T0009969.1 MGP_BALBcJ_G0008094.1 mouse_genomes_project 14 50911040 50911104 + Mir3077 miRNA miRNA MGP_BALBcJ_T0039784.1 MGP_BALBcJ_G0021413.1 mouse_genomes_project 14 55795170 55824037 + MGP_BALBcJ_P0039784 Serpine3 protein_coding protein_coding MGP_BALBcJ_T0039825.1 MGP_BALBcJ_G0021432.1 mouse_genomes_project 14 57140835 57157457 - MGP_BALBcJ_P0039825 4930578I06Rik protein_coding protein_coding MGP_BALBcJ_T0012974.1 MGP_BALBcJ_G0011071.1 mouse_genomes_project 14 38255943 38256136 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100709.1 MGP_BALBcJ_G0038745.1 mouse_genomes_project 14 85795003 85795133 - Gm24127 snoRNA snoRNA MGP_BALBcJ_T0039738.1 MGP_BALBcJ_G0021394.1 mouse_genomes_project 14 53349599 53382716 - MGP_BALBcJ_P0039738 Nupl1 protein_coding protein_coding MGP_BALBcJ_T0009966.1 MGP_BALBcJ_G0008091.1 mouse_genomes_project 14 47944315 47944398 - Mir208a miRNA miRNA MGP_BALBcJ_T0040130.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69496236 69589810 + MGP_BALBcJ_P0040130 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040131.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69496862 69589810 + MGP_BALBcJ_P0040131 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040132.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69497389 69497919 + Tsc22d1 protein_coding processed_transcript MGP_BALBcJ_T0040133.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69499626 69523267 + MGP_BALBcJ_P0040133 Tsc22d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040134.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69499920 69520638 + MGP_BALBcJ_P0040134 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040135.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69499923 69521979 + MGP_BALBcJ_P0040135 Tsc22d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040136.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69500100 69522051 + MGP_BALBcJ_P0040136 Tsc22d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040137.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69519393 69522021 + Tsc22d1 protein_coding processed_transcript MGP_BALBcJ_T0040138.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69520571 69522021 + Tsc22d1 protein_coding retained_intron MGP_BALBcJ_T0040139.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69558662 69588977 + MGP_BALBcJ_P0040139 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040140.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69569968 69589045 + MGP_BALBcJ_P0040140 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040141.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69570646 69589218 + MGP_BALBcJ_P0040141 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040142.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69586259 69589811 + MGP_BALBcJ_P0040142 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040143.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69586523 69589813 + MGP_BALBcJ_P0040143 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040144.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69586575 69587783 + MGP_BALBcJ_P0040144 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0040145.1 MGP_BALBcJ_G0021545.1 mouse_genomes_project 14 69587144 69589049 + MGP_BALBcJ_P0040145 Tsc22d1 protein_coding protein_coding MGP_BALBcJ_T0002637.1 MGP_BALBcJ_G0002525.1 mouse_genomes_project 14 46838708 46839302 + MGP_BALBcJ_P0002637 Trav19 TR_V_gene TR_V_gene MGP_BALBcJ_T0099420.1 MGP_BALBcJ_G0037456.1 mouse_genomes_project 14 56249081 56249168 + Gm23629 snRNA snRNA MGP_BALBcJ_T0040030.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63792649 63800347 + Dok2 protein_coding processed_transcript MGP_BALBcJ_T0040031.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63792662 63798914 + Dok2 protein_coding processed_transcript MGP_BALBcJ_T0040032.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63800046 63802796 + Dok2 protein_coding processed_transcript MGP_BALBcJ_T0040033.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63801090 63805264 + MGP_BALBcJ_P0040033 Dok2 protein_coding protein_coding MGP_BALBcJ_T0040034.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63802662 63803638 + Dok2 protein_coding retained_intron MGP_BALBcJ_T0040035.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63802961 63804321 + Dok2 protein_coding processed_transcript MGP_BALBcJ_T0040036.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63803146 63804330 + Dok2 protein_coding processed_transcript MGP_BALBcJ_T0040037.1 MGP_BALBcJ_G0021515.1 mouse_genomes_project 14 63803478 63804364 + Dok2 protein_coding retained_intron MGP_BALBcJ_T0039837.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57974744 58113207 - MGP_BALBcJ_P0039837 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039838.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57977771 57985806 - Hmbox1 protein_coding processed_transcript MGP_BALBcJ_T0039839.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57985727 58113228 - MGP_BALBcJ_P0039839 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039840.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57985727 58113204 - MGP_BALBcJ_P0039840 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039841.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57986323 58112989 - MGP_BALBcJ_P0039841 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039842.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57986678 58070008 - MGP_BALBcJ_P0039842 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039843.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57988568 58113213 - MGP_BALBcJ_P0039843 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039844.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57988815 58113204 - MGP_BALBcJ_P0039844 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039845.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 57988848 58113204 - MGP_BALBcJ_P0039845 Hmbox1 protein_coding protein_coding MGP_BALBcJ_T0039846.1 MGP_BALBcJ_G0021439.1 mouse_genomes_project 14 58050518 58113204 - Hmbox1 protein_coding retained_intron MGP_BALBcJ_T0003515.1 MGP_BALBcJ_G0003197.1 mouse_genomes_project 14 25813288 25817477 - Gm15512 antisense antisense MGP_BALBcJ_T0039823.1 MGP_BALBcJ_G0021430.1 mouse_genomes_project 14 57029551 57089604 + MGP_BALBcJ_P0039823 Pinx1 protein_coding protein_coding MGP_BALBcJ_T0038816.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24598822 24620760 + MGP_BALBcJ_P0038816 protein_coding protein_coding MGP_BALBcJ_T0038817.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24598895 24615993 + MGP_BALBcJ_P0038817 protein_coding protein_coding MGP_BALBcJ_T0038818.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24598938 24615878 + MGP_BALBcJ_P0038818 protein_coding protein_coding MGP_BALBcJ_T0038819.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24604546 24620760 + MGP_BALBcJ_P0038819 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038820.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24604748 24620152 + MGP_BALBcJ_P0038820 protein_coding protein_coding MGP_BALBcJ_T0038821.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24604749 24611477 + MGP_BALBcJ_P0038821 protein_coding protein_coding MGP_BALBcJ_T0038822.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24604749 24611839 + MGP_BALBcJ_P0038822 protein_coding protein_coding MGP_BALBcJ_T0038823.1 MGP_BALBcJ_G0021091.1 mouse_genomes_project 14 24605123 24611700 + MGP_BALBcJ_P0038823 protein_coding protein_coding MGP_BALBcJ_T0040115.1 MGP_BALBcJ_G0021536.1 mouse_genomes_project 14 68634600 68643120 - MGP_BALBcJ_P0040115 Spert protein_coding protein_coding MGP_BALBcJ_T0040116.1 MGP_BALBcJ_G0021536.1 mouse_genomes_project 14 68634600 68644251 - MGP_BALBcJ_P0040116 Spert protein_coding protein_coding MGP_BALBcJ_T0040117.1 MGP_BALBcJ_G0021536.1 mouse_genomes_project 14 68634600 68644251 - MGP_BALBcJ_P0040117 Spert protein_coding protein_coding MGP_BALBcJ_T0040118.1 MGP_BALBcJ_G0021536.1 mouse_genomes_project 14 68634600 68643120 - MGP_BALBcJ_P0040118 Spert protein_coding protein_coding MGP_BALBcJ_T0099438.1 MGP_BALBcJ_G0037474.1 mouse_genomes_project 14 98834659 98834767 - Gm24207 snRNA snRNA MGP_BALBcJ_T0012984.1 MGP_BALBcJ_G0011081.1 mouse_genomes_project 14 47313895 47314579 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099414.1 MGP_BALBcJ_G0037450.1 mouse_genomes_project 14 47566551 47566659 + Gm24705 snRNA snRNA MGP_BALBcJ_T0003510.1 MGP_BALBcJ_G0003192.1 mouse_genomes_project 14 18431444 18444950 - Anxa11os antisense antisense MGP_BALBcJ_T0002502.1 MGP_BALBcJ_G0002407.1 mouse_genomes_project 14 47147743 47147809 + MGP_BALBcJ_P0002502 Traj53 TR_J_gene TR_J_gene MGP_BALBcJ_T0039392.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629142 47640554 - MGP_BALBcJ_P0039392 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039393.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629142 47640633 - MGP_BALBcJ_P0039393 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039394.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629142 47640605 - MGP_BALBcJ_P0039394 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039395.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629142 47674773 - MGP_BALBcJ_P0039395 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039396.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629143 47640639 - MGP_BALBcJ_P0039396 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039397.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629143 47674458 - MGP_BALBcJ_P0039397 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039398.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629148 47640620 - MGP_BALBcJ_P0039398 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039399.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629710 47640176 - MGP_BALBcJ_P0039399 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039400.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629710 47674773 - MGP_BALBcJ_P0039400 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039401.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47629884 47631520 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039402.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47630270 47631194 - MGP_BALBcJ_P0039402 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039403.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47631238 47632837 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039404.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47631710 47635522 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039405.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47631970 47633018 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039406.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47632184 47637210 - Acin1 protein_coding processed_transcript MGP_BALBcJ_T0039407.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47632276 47635286 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039408.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47632712 47640623 - MGP_BALBcJ_P0039408 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039409.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47633526 47636844 - Acin1 protein_coding processed_transcript MGP_BALBcJ_T0039410.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47637736 47640619 - Acin1 protein_coding processed_transcript MGP_BALBcJ_T0039411.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47637789 47640619 - Acin1 protein_coding processed_transcript MGP_BALBcJ_T0039412.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47638351 47650689 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039413.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47638465 47640629 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039414.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47648777 47651656 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0039415.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47652104 47673902 - MGP_BALBcJ_P0039415 Acin1 protein_coding protein_coding MGP_BALBcJ_T0039416.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47662973 47674475 - Acin1 protein_coding processed_transcript MGP_BALBcJ_T0039417.1 MGP_BALBcJ_G0021284.1 mouse_genomes_project 14 47666498 47674457 - Acin1 protein_coding retained_intron MGP_BALBcJ_T0038521.1 MGP_BALBcJ_G0021019.1 mouse_genomes_project 14 18291264 18343165 - MGP_BALBcJ_P0038521 Zcchc24 protein_coding protein_coding MGP_BALBcJ_T0038522.1 MGP_BALBcJ_G0021019.1 mouse_genomes_project 14 18291266 18299412 - Zcchc24 protein_coding retained_intron MGP_BALBcJ_T0011353.1 MGP_BALBcJ_G0009478.1 mouse_genomes_project 14 54751799 54751913 + Gm27845 misc_RNA misc_RNA MGP_BALBcJ_T0002487.1 MGP_BALBcJ_G0002394.1 mouse_genomes_project 14 47114279 47114295 + MGP_BALBcJ_P0002487 Trdd2 TR_D_gene TR_D_gene MGP_BALBcJ_T0038768.1 MGP_BALBcJ_G0021081.1 mouse_genomes_project 14 23866044 23883150 - MGP_BALBcJ_P0038768 Mettl6 protein_coding protein_coding MGP_BALBcJ_T0017394.1 MGP_BALBcJ_G0015225.1 mouse_genomes_project 14 116258135 116261417 - 2610035F20Rik processed_transcript retained_intron MGP_BALBcJ_T0017395.1 MGP_BALBcJ_G0015225.1 mouse_genomes_project 14 116258228 116263037 - 2610035F20Rik processed_transcript processed_transcript MGP_BALBcJ_T0039801.1 MGP_BALBcJ_G0021422.1 mouse_genomes_project 14 56297573 56328954 - MGP_BALBcJ_P0039801 Fdft1 protein_coding protein_coding MGP_BALBcJ_T0002697.1 MGP_BALBcJ_G0002573.1 mouse_genomes_project 14 45847008 45847277 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0040239.1 MGP_BALBcJ_G0021587.1 mouse_genomes_project 14 95216067 95259295 + MGP_BALBcJ_P0040239 Uchl3 protein_coding protein_coding MGP_BALBcJ_T0038927.1 MGP_BALBcJ_G0021132.1 mouse_genomes_project 14 27282862 28041880 + MGP_BALBcJ_P0038927 Grid1 protein_coding protein_coding MGP_BALBcJ_T0038928.1 MGP_BALBcJ_G0021132.1 mouse_genomes_project 14 28028505 28039615 + Grid1 protein_coding processed_transcript MGP_BALBcJ_T0099430.1 MGP_BALBcJ_G0037466.1 mouse_genomes_project 14 91501190 91501353 - Gm25831 snRNA snRNA MGP_BALBcJ_T0040260.1 MGP_BALBcJ_G0021593.1 mouse_genomes_project 14 96628278 96647798 - MGP_BALBcJ_P0040260 Fbxl3 protein_coding protein_coding MGP_BALBcJ_T0040261.1 MGP_BALBcJ_G0021593.1 mouse_genomes_project 14 96629081 96647137 - MGP_BALBcJ_P0040261 Fbxl3 protein_coding protein_coding MGP_BALBcJ_T0040262.1 MGP_BALBcJ_G0021593.1 mouse_genomes_project 14 96629731 96647113 - MGP_BALBcJ_P0040262 Fbxl3 protein_coding protein_coding MGP_BALBcJ_T0040263.1 MGP_BALBcJ_G0021593.1 mouse_genomes_project 14 96631152 96637955 - Fbxl3 protein_coding retained_intron MGP_BALBcJ_T0040264.1 MGP_BALBcJ_G0021593.1 mouse_genomes_project 14 96637551 96647810 - MGP_BALBcJ_P0040264 Fbxl3 protein_coding protein_coding MGP_BALBcJ_T0040265.1 MGP_BALBcJ_G0021593.1 mouse_genomes_project 14 96637589 96643886 - MGP_BALBcJ_P0040265 Fbxl3 protein_coding protein_coding MGP_BALBcJ_T0099440.1 MGP_BALBcJ_G0037476.1 mouse_genomes_project 14 104117030 104117137 - Gm23242 snRNA snRNA MGP_BALBcJ_T0038585.1 MGP_BALBcJ_G0021037.1 mouse_genomes_project 14 19013070 19129530 + MGP_BALBcJ_P0038585 Dnah12 protein_coding protein_coding MGP_BALBcJ_T0038586.1 MGP_BALBcJ_G0021037.1 mouse_genomes_project 14 19013242 19205543 + MGP_BALBcJ_P0038586 Dnah12 protein_coding unknown_likely_coding MGP_BALBcJ_T0038587.1 MGP_BALBcJ_G0021037.1 mouse_genomes_project 14 19084117 19086861 + MGP_BALBcJ_P0038587 Dnah12 protein_coding protein_coding MGP_BALBcJ_T0038588.1 MGP_BALBcJ_G0021037.1 mouse_genomes_project 14 19148084 19205612 + MGP_BALBcJ_P0038588 Dnah12 protein_coding protein_coding MGP_BALBcJ_T0038853.1 MGP_BALBcJ_G0021104.1 mouse_genomes_project 14 25303181 25387374 + MGP_BALBcJ_P0038853 Vstm4 protein_coding protein_coding MGP_BALBcJ_T0017387.1 MGP_BALBcJ_G0015221.1 mouse_genomes_project 14 109504389 109590987 - Gm20713 processed_transcript processed_transcript MGP_BALBcJ_T0000904.1 MGP_BALBcJ_G0000835.1 mouse_genomes_project 14 45303916 45306258 - TEC TEC MGP_BALBcJ_T0012976.1 MGP_BALBcJ_G0011073.1 mouse_genomes_project 14 38447317 38447696 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039020.1 MGP_BALBcJ_G0021167.1 mouse_genomes_project 14 39359585 39385441 + MGP_BALBcJ_P0039020 Cgrrf1 protein_coding protein_coding MGP_BALBcJ_T0039021.1 MGP_BALBcJ_G0021167.1 mouse_genomes_project 14 39359670 39367836 + Cgrrf1 protein_coding retained_intron MGP_BALBcJ_T0039022.1 MGP_BALBcJ_G0021167.1 mouse_genomes_project 14 39359680 39377892 + Cgrrf1 protein_coding retained_intron MGP_BALBcJ_T0039023.1 MGP_BALBcJ_G0021167.1 mouse_genomes_project 14 39359695 39379353 + Cgrrf1 protein_coding retained_intron MGP_BALBcJ_T0039946.1 MGP_BALBcJ_G0021481.1 mouse_genomes_project 14 62474221 62517749 - MGP_BALBcJ_P0039946 Slc25a37 protein_coding protein_coding MGP_BALBcJ_T0039947.1 MGP_BALBcJ_G0021481.1 mouse_genomes_project 14 62474224 62517749 - Slc25a37 protein_coding retained_intron MGP_BALBcJ_T0039948.1 MGP_BALBcJ_G0021481.1 mouse_genomes_project 14 62476549 62517604 - MGP_BALBcJ_P0039948 Slc25a37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099422.1 MGP_BALBcJ_G0037458.1 mouse_genomes_project 14 65170647 65170781 + Gm23735 snRNA snRNA MGP_BALBcJ_T0039864.1 MGP_BALBcJ_G0021450.1 mouse_genomes_project 14 58984910 59000064 - MGP_BALBcJ_P0039864 Esco2 protein_coding protein_coding MGP_BALBcJ_T0039865.1 MGP_BALBcJ_G0021450.1 mouse_genomes_project 14 58991884 58993080 - Esco2 protein_coding processed_transcript MGP_BALBcJ_T0039866.1 MGP_BALBcJ_G0021450.1 mouse_genomes_project 14 58992833 58995015 - Esco2 protein_coding processed_transcript MGP_BALBcJ_T0010002.1 MGP_BALBcJ_G0008127.1 mouse_genomes_project 14 108764250 108764330 + Mir92-1 miRNA miRNA MGP_BALBcJ_T0039107.1 MGP_BALBcJ_G0021183.1 mouse_genomes_project 14 41819881 41844744 - MGP_BALBcJ_P0039107 1700011H14Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0039108.1 MGP_BALBcJ_G0021183.1 mouse_genomes_project 14 41823757 41844915 - MGP_BALBcJ_P0039108 1700011H14Rik protein_coding protein_coding MGP_BALBcJ_T0039109.1 MGP_BALBcJ_G0021183.1 mouse_genomes_project 14 41823991 41844884 - MGP_BALBcJ_P0039109 1700011H14Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039110.1 MGP_BALBcJ_G0021183.1 mouse_genomes_project 14 41830211 41844884 - MGP_BALBcJ_P0039110 1700011H14Rik protein_coding protein_coding MGP_BALBcJ_T0039223.1 MGP_BALBcJ_G0021245.1 mouse_genomes_project 14 44854081 44856342 + MGP_BALBcJ_P0039223 Tppp2 protein_coding protein_coding MGP_BALBcJ_T0039224.1 MGP_BALBcJ_G0021245.1 mouse_genomes_project 14 44854411 44856342 + MGP_BALBcJ_P0039224 Tppp2 protein_coding protein_coding MGP_BALBcJ_T0039178.1 MGP_BALBcJ_G0021223.1 mouse_genomes_project 14 43725285 43728293 + MGP_BALBcJ_P0039178 Rnase10 protein_coding protein_coding MGP_BALBcJ_T0039179.1 MGP_BALBcJ_G0021223.1 mouse_genomes_project 14 43725463 43728293 + MGP_BALBcJ_P0039179 Rnase10 protein_coding protein_coding MGP_BALBcJ_T0038288.1 MGP_BALBcJ_G0020955.1 mouse_genomes_project 14 6327619 6340242 - MGP_BALBcJ_P0038288 Thoc7 protein_coding protein_coding MGP_BALBcJ_T0038289.1 MGP_BALBcJ_G0020955.1 mouse_genomes_project 14 6327865 6334953 - MGP_BALBcJ_P0038289 Thoc7 protein_coding unknown_likely_coding MGP_BALBcJ_T0039892.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537314 59549778 + MGP_BALBcJ_P0039892 Stmn4 protein_coding protein_coding MGP_BALBcJ_T0039893.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537322 59554702 + MGP_BALBcJ_P0039893 Stmn4 protein_coding protein_coding MGP_BALBcJ_T0039894.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537385 59548875 + Stmn4 protein_coding retained_intron MGP_BALBcJ_T0039895.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537385 59548664 + Stmn4 protein_coding processed_transcript MGP_BALBcJ_T0039896.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537391 59554696 + MGP_BALBcJ_P0039896 Stmn4 protein_coding protein_coding MGP_BALBcJ_T0039897.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537392 59554696 + MGP_BALBcJ_P0039897 Stmn4 protein_coding protein_coding MGP_BALBcJ_T0039898.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537393 59554670 + MGP_BALBcJ_P0039898 Stmn4 protein_coding protein_coding MGP_BALBcJ_T0039899.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537396 59549783 + MGP_BALBcJ_P0039899 Stmn4 protein_coding protein_coding MGP_BALBcJ_T0039900.1 MGP_BALBcJ_G0021460.1 mouse_genomes_project 14 59537399 59551124 + Stmn4 protein_coding retained_intron MGP_BALBcJ_T0039431.1 MGP_BALBcJ_G0021291.1 mouse_genomes_project 14 47879041 47893757 + MGP_BALBcJ_P0039431 Gm20521 protein_coding protein_coding MGP_BALBcJ_T0039340.1 MGP_BALBcJ_G0021266.1 mouse_genomes_project 14 47227456 47246539 - MGP_BALBcJ_P0039340 Dad1 protein_coding protein_coding MGP_BALBcJ_T0039341.1 MGP_BALBcJ_G0021266.1 mouse_genomes_project 14 47231815 47246349 - MGP_BALBcJ_P0039341 Dad1 protein_coding protein_coding MGP_BALBcJ_T0039741.1 MGP_BALBcJ_G0021396.1 mouse_genomes_project 14 53493036 53495745 + MGP_BALBcJ_P0039741 Amer2 protein_coding protein_coding MGP_BALBcJ_T0040258.1 MGP_BALBcJ_G0021591.1 mouse_genomes_project 14 96595664 96605449 + MGP_BALBcJ_P0040258 Acod1 protein_coding protein_coding MGP_BALBcJ_T0098326.1 MGP_BALBcJ_G0036380.1 mouse_genomes_project 14 96529084 96533395 - pseudogene pseudogene MGP_BALBcJ_T0009962.1 MGP_BALBcJ_G0008087.1 mouse_genomes_project 14 39495050 39495149 - Mir378c miRNA miRNA MGP_BALBcJ_T0038528.1 MGP_BALBcJ_G0021022.1 mouse_genomes_project 14 18463545 18478531 - MGP_BALBcJ_P0038528 protein_coding protein_coding MGP_BALBcJ_T0038532.1 MGP_BALBcJ_G0021022.1 mouse_genomes_project 14 18464018 18477907 - MGP_BALBcJ_P0038532 protein_coding protein_coding MGP_BALBcJ_T0039861.1 MGP_BALBcJ_G0021449.1 mouse_genomes_project 14 58971719 58983695 + MGP_BALBcJ_P0039861 Pbk protein_coding protein_coding MGP_BALBcJ_T0039862.1 MGP_BALBcJ_G0021449.1 mouse_genomes_project 14 58971819 58978981 + Pbk protein_coding processed_transcript MGP_BALBcJ_T0039863.1 MGP_BALBcJ_G0021449.1 mouse_genomes_project 14 58972114 58979747 + MGP_BALBcJ_P0039863 Pbk protein_coding protein_coding MGP_BALBcJ_T0100698.1 MGP_BALBcJ_G0038734.1 mouse_genomes_project 14 60804222 60804354 + Gm24981 snoRNA snoRNA MGP_BALBcJ_T0040177.1 MGP_BALBcJ_G0021562.1 mouse_genomes_project 14 72539656 72543612 + MGP_BALBcJ_P0040177 Kbtbd7 protein_coding protein_coding MGP_BALBcJ_T0003492.1 MGP_BALBcJ_G0003183.1 mouse_genomes_project 14 4269091 4285981 - Gm3848 antisense antisense MGP_BALBcJ_T0003493.1 MGP_BALBcJ_G0003183.1 mouse_genomes_project 14 4284955 4285966 - Gm3848 antisense antisense MGP_BALBcJ_T0010005.1 MGP_BALBcJ_G0008130.1 mouse_genomes_project 14 112295698 112295802 - Mir6391 miRNA miRNA MGP_BALBcJ_T0039184.1 MGP_BALBcJ_G0021228.1 mouse_genomes_project 14 43824800 43840884 + MGP_BALBcJ_P0039184 protein_coding protein_coding MGP_BALBcJ_T0039186.1 MGP_BALBcJ_G0021228.1 mouse_genomes_project 14 43829673 43840884 + MGP_BALBcJ_P0039186 protein_coding protein_coding MGP_BALBcJ_T0040401.1 MGP_BALBcJ_G0021645.1 mouse_genomes_project 14 117764983 118486326 - MGP_BALBcJ_P0040401 Fgf14 protein_coding protein_coding MGP_BALBcJ_T0040402.1 MGP_BALBcJ_G0021645.1 mouse_genomes_project 14 117765367 117985963 - MGP_BALBcJ_P0040402 Fgf14 protein_coding protein_coding MGP_BALBcJ_T0038967.1 MGP_BALBcJ_G0021148.1 mouse_genomes_project 14 33607809 33626841 + MGP_BALBcJ_P0038967 Mat1a protein_coding protein_coding MGP_BALBcJ_T0039616.1 MGP_BALBcJ_G0021340.1 mouse_genomes_project 14 48919994 48922941 - MGP_BALBcJ_P0039616 Sdr39u1 protein_coding protein_coding MGP_BALBcJ_T0017386.1 MGP_BALBcJ_G0015220.1 mouse_genomes_project 14 109107032 109119708 - 4930505G20Rik processed_transcript processed_transcript MGP_BALBcJ_T0039496.1 MGP_BALBcJ_G0021311.1 mouse_genomes_project 14 48552790 48553255 - MGP_BALBcJ_P0039496 A730061H03Rik protein_coding protein_coding MGP_BALBcJ_T0010000.1 MGP_BALBcJ_G0008125.1 mouse_genomes_project 14 108763980 108764087 + Mir20a miRNA miRNA MGP_BALBcJ_T0039714.1 MGP_BALBcJ_G0021385.1 mouse_genomes_project 14 52479689 52500177 - MGP_BALBcJ_P0039714 Phf11d protein_coding protein_coding MGP_BALBcJ_T0039715.1 MGP_BALBcJ_G0021385.1 mouse_genomes_project 14 52481014 52500147 - Phf11d protein_coding retained_intron MGP_BALBcJ_T0039716.1 MGP_BALBcJ_G0021385.1 mouse_genomes_project 14 52481014 52500151 - MGP_BALBcJ_P0039716 Phf11d protein_coding protein_coding MGP_BALBcJ_T0039717.1 MGP_BALBcJ_G0021385.1 mouse_genomes_project 14 52481300 52500117 - MGP_BALBcJ_P0039717 Phf11d protein_coding protein_coding MGP_BALBcJ_T0100670.1 MGP_BALBcJ_G0038706.1 mouse_genomes_project 14 3634944 3635076 + Gm25466 snoRNA snoRNA MGP_BALBcJ_T0038238.1 MGP_BALBcJ_G0020938.1 mouse_genomes_project 14 404925 471721 + MGP_BALBcJ_P0038238 Pxk protein_coding protein_coding MGP_BALBcJ_T0038239.1 MGP_BALBcJ_G0020938.1 mouse_genomes_project 14 404925 471721 + MGP_BALBcJ_P0038239 Pxk protein_coding protein_coding MGP_BALBcJ_T0040015.1 MGP_BALBcJ_G0021507.1 mouse_genomes_project 14 63577548 63581245 + MGP_BALBcJ_P0040015 Reep4 protein_coding protein_coding MGP_BALBcJ_T0038789.1 MGP_BALBcJ_G0021085.1 mouse_genomes_project 14 24033011 24059904 + Btd protein_coding processed_transcript MGP_BALBcJ_T0038790.1 MGP_BALBcJ_G0021085.1 mouse_genomes_project 14 24033040 24061312 + MGP_BALBcJ_P0038790 Btd protein_coding protein_coding MGP_BALBcJ_T0002573.1 MGP_BALBcJ_G0002474.1 mouse_genomes_project 14 47198946 47198983 + TR_J_pseudogene TR_J_pseudogene MGP_BALBcJ_T0012965.1 MGP_BALBcJ_G0011062.1 mouse_genomes_project 14 18878244 18879042 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038494.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16720066 16834978 - MGP_BALBcJ_P0038494 Dlg5 protein_coding protein_coding MGP_BALBcJ_T0038495.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16720066 16765053 - MGP_BALBcJ_P0038495 Dlg5 protein_coding protein_coding MGP_BALBcJ_T0038496.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16720066 16732302 - MGP_BALBcJ_P0038496 Dlg5 protein_coding protein_coding MGP_BALBcJ_T0038497.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16720068 16834978 - MGP_BALBcJ_P0038497 Dlg5 protein_coding protein_coding MGP_BALBcJ_T0038498.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16730497 16736654 - MGP_BALBcJ_P0038498 Dlg5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038499.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16732394 16734878 - Dlg5 protein_coding retained_intron MGP_BALBcJ_T0038500.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16740415 16743359 - Dlg5 protein_coding retained_intron MGP_BALBcJ_T0038501.1 MGP_BALBcJ_G0021013.1 mouse_genomes_project 14 16778190 16833923 - MGP_BALBcJ_P0038501 Dlg5 protein_coding protein_coding MGP_BALBcJ_T0009970.1 MGP_BALBcJ_G0008095.1 mouse_genomes_project 14 53359201 53359311 - Mir719 miRNA miRNA MGP_BALBcJ_T0038443.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298754 14306814 - MGP_BALBcJ_P0038443 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038444.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298755 14306857 - MGP_BALBcJ_P0038444 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038445.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298755 14308217 - MGP_BALBcJ_P0038445 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038446.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298755 14313958 - MGP_BALBcJ_P0038446 Dusp13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038447.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298755 14306843 - MGP_BALBcJ_P0038447 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038448.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298755 14305739 - MGP_BALBcJ_P0038448 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038449.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298755 14313960 - MGP_BALBcJ_P0038449 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038450.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298758 14313980 - MGP_BALBcJ_P0038450 Dusp13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038451.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14298949 14313958 - MGP_BALBcJ_P0038451 Dusp13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038452.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14299009 14313964 - MGP_BALBcJ_P0038452 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038453.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14305472 14313964 - Dusp13 protein_coding processed_transcript MGP_BALBcJ_T0038454.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14305481 14311823 - MGP_BALBcJ_P0038454 Dusp13 protein_coding protein_coding MGP_BALBcJ_T0038455.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14308849 14313976 - MGP_BALBcJ_P0038455 Dusp13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038456.1 MGP_BALBcJ_G0021006.1 mouse_genomes_project 14 14310211 14316518 - Dusp13 protein_coding processed_transcript MGP_BALBcJ_T0003491.1 MGP_BALBcJ_G0003182.1 mouse_genomes_project 14 3035343 3072950 + Fhitos antisense antisense MGP_BALBcJ_T0039753.1 MGP_BALBcJ_G0021399.1 mouse_genomes_project 14 53897342 54005129 + MGP_BALBcJ_P0039753 Mipep protein_coding protein_coding MGP_BALBcJ_T0099434.1 MGP_BALBcJ_G0037470.1 mouse_genomes_project 14 93356164 93356350 - Gm22970 snRNA snRNA MGP_BALBcJ_T0040296.1 MGP_BALBcJ_G0021602.1 mouse_genomes_project 14 99457647 99462510 - MGP_BALBcJ_P0040296 Spry2 protein_coding protein_coding MGP_BALBcJ_T0039014.1 MGP_BALBcJ_G0021165.1 mouse_genomes_project 14 39303499 39316942 - MGP_BALBcJ_P0039014 Cnih1 protein_coding protein_coding MGP_BALBcJ_T0039015.1 MGP_BALBcJ_G0021165.1 mouse_genomes_project 14 39303499 39316942 - MGP_BALBcJ_P0039015 Cnih1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039016.1 MGP_BALBcJ_G0021165.1 mouse_genomes_project 14 39304806 39316794 - MGP_BALBcJ_P0039016 Cnih1 protein_coding unknown_likely_coding MGP_BALBcJ_T0039908.1 MGP_BALBcJ_G0021464.1 mouse_genomes_project 14 60082027 60084170 + MGP_BALBcJ_P0039908 Gm5464 protein_coding protein_coding MGP_BALBcJ_T0038479.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15878144 16390412 - MGP_BALBcJ_P0038479 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038480.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15878144 16390412 - MGP_BALBcJ_P0038480 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038481.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15887407 16390412 - MGP_BALBcJ_P0038481 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038482.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15887407 16390412 - MGP_BALBcJ_P0038482 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038483.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15887407 16390412 - MGP_BALBcJ_P0038483 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038484.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888094 16593057 - MGP_BALBcJ_P0038484 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038485.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888108 16236855 - MGP_BALBcJ_P0038485 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038486.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888108 16390412 - MGP_BALBcJ_P0038486 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038487.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888108 16593711 - MGP_BALBcJ_P0038487 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038488.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888604 16592829 - MGP_BALBcJ_P0038488 Kcnma1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038489.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888604 16593057 - MGP_BALBcJ_P0038489 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038490.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15888734 16592977 - MGP_BALBcJ_P0038490 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038491.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15897710 16390412 - MGP_BALBcJ_P0038491 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038492.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 15897710 16390412 - MGP_BALBcJ_P0038492 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038493.1 MGP_BALBcJ_G0021012.1 mouse_genomes_project 14 16591507 16593150 - MGP_BALBcJ_P0038493 Kcnma1 protein_coding protein_coding MGP_BALBcJ_T0038921.1 MGP_BALBcJ_G0021131.1 mouse_genomes_project 14 27141999 27214356 + MGP_BALBcJ_P0038921 Wapl protein_coding protein_coding MGP_BALBcJ_T0038922.1 MGP_BALBcJ_G0021131.1 mouse_genomes_project 14 27142035 27212224 + MGP_BALBcJ_P0038922 Wapl protein_coding protein_coding MGP_BALBcJ_T0038923.1 MGP_BALBcJ_G0021131.1 mouse_genomes_project 14 27142193 27212319 + MGP_BALBcJ_P0038923 Wapl protein_coding protein_coding MGP_BALBcJ_T0038924.1 MGP_BALBcJ_G0021131.1 mouse_genomes_project 14 27162092 27212584 + Wapl protein_coding processed_transcript MGP_BALBcJ_T0038925.1 MGP_BALBcJ_G0021131.1 mouse_genomes_project 14 27192498 27212586 + MGP_BALBcJ_P0038925 Wapl protein_coding protein_coding MGP_BALBcJ_T0038926.1 MGP_BALBcJ_G0021131.1 mouse_genomes_project 14 27203221 27207504 + MGP_BALBcJ_P0038926 Wapl protein_coding protein_coding MGP_BALBcJ_T0100721.1 MGP_BALBcJ_G0038757.1 mouse_genomes_project 14 100081357 100081464 - Gm24634 snoRNA snoRNA MGP_BALBcJ_T0039934.1 MGP_BALBcJ_G0021472.1 mouse_genomes_project 14 60989994 61171918 - MGP_BALBcJ_P0039934 Dock5 protein_coding protein_coding MGP_BALBcJ_T0002534.1 MGP_BALBcJ_G0002437.1 mouse_genomes_project 14 47187819 47187876 + MGP_BALBcJ_P0002534 Traj21 TR_J_gene TR_J_gene MGP_BALBcJ_T0099443.1 MGP_BALBcJ_G0037479.1 mouse_genomes_project 14 108699471 108699577 - Gm24073 snRNA snRNA MGP_BALBcJ_T0002519.1 MGP_BALBcJ_G0002422.1 mouse_genomes_project 14 47170229 47170289 + MGP_BALBcJ_P0002519 Traj37 TR_J_gene TR_J_gene MGP_BALBcJ_T0013016.1 MGP_BALBcJ_G0011113.1 mouse_genomes_project 14 106169762 106170242 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039053.1 MGP_BALBcJ_G0021174.1 mouse_genomes_project 14 40106744 40136873 - MGP_BALBcJ_P0039053 Atg14 protein_coding protein_coding MGP_BALBcJ_T0038687.1 MGP_BALBcJ_G0021067.1 mouse_genomes_project 14 23364468 23372906 + MGP_BALBcJ_P0038687 Glt8d1 protein_coding unknown_likely_coding MGP_BALBcJ_T0040301.1 MGP_BALBcJ_G0021606.1 mouse_genomes_project 14 104245532 104246412 + MGP_BALBcJ_P0040301 protein_coding protein_coding MGP_BALBcJ_T0039790.1 MGP_BALBcJ_G0021418.1 mouse_genomes_project 14 56157475 56163884 + MGP_BALBcJ_P0039790 Defb43 protein_coding protein_coding MGP_BALBcJ_T0006713.1 MGP_BALBcJ_G0005541.1 mouse_genomes_project 14 111810258 111819510 + Gm26773 lincRNA lincRNA MGP_BALBcJ_T0012951.1 MGP_BALBcJ_G0011048.1 mouse_genomes_project 14 3475857 3476683 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013020.1 MGP_BALBcJ_G0011117.1 mouse_genomes_project 14 116285680 116286319 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003520.1 MGP_BALBcJ_G0003202.1 mouse_genomes_project 14 37477488 37515162 - Gm17173 antisense antisense MGP_BALBcJ_T0038954.1 MGP_BALBcJ_G0021143.1 mouse_genomes_project 14 33323257 33395796 - MGP_BALBcJ_P0038954 Sh2d4b protein_coding protein_coding MGP_BALBcJ_T0040222.1 MGP_BALBcJ_G0021583.1 mouse_genomes_project 14 93454657 93732921 - MGP_BALBcJ_P0040222 Klf12 protein_coding protein_coding MGP_BALBcJ_T0040100.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68184724 68253214 + MGP_BALBcJ_P0040100 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040101.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68184782 68201704 + Lcp1 protein_coding processed_transcript MGP_BALBcJ_T0040102.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68184782 68254284 + MGP_BALBcJ_P0040102 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040103.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68185122 68254233 + MGP_BALBcJ_P0040103 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040104.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68185177 68283556 + MGP_BALBcJ_P0040104 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040105.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68189955 68284602 + MGP_BALBcJ_P0040105 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040106.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68190098 68254224 + MGP_BALBcJ_P0040106 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040107.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68228736 68231813 + Lcp1 protein_coding retained_intron MGP_BALBcJ_T0040108.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68229997 68251912 + Lcp1 protein_coding processed_transcript MGP_BALBcJ_T0040109.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68244098 68284576 + MGP_BALBcJ_P0040109 Lcp1 protein_coding protein_coding MGP_BALBcJ_T0040110.1 MGP_BALBcJ_G0021532.1 mouse_genomes_project 14 68251669 68253136 + Lcp1 protein_coding processed_transcript MGP_BALBcJ_T0006640.1 MGP_BALBcJ_G0005490.1 mouse_genomes_project 14 17218426 17229034 - lincRNA lincRNA MGP_BALBcJ_T0006641.1 MGP_BALBcJ_G0005490.1 mouse_genomes_project 14 17226840 17229027 - lincRNA lincRNA MGP_BALBcJ_T0038291.1 MGP_BALBcJ_G0020957.1 mouse_genomes_project 14 6494150 6502906 - MGP_BALBcJ_P0038291 Psmd6 protein_coding protein_coding MGP_BALBcJ_T0038292.1 MGP_BALBcJ_G0020957.1 mouse_genomes_project 14 6495876 6498516 - Psmd6 protein_coding retained_intron MGP_BALBcJ_T0038293.1 MGP_BALBcJ_G0020957.1 mouse_genomes_project 14 6498160 6499313 - Psmd6 protein_coding retained_intron MGP_BALBcJ_T0038294.1 MGP_BALBcJ_G0020957.1 mouse_genomes_project 14 6501593 6502855 - Psmd6 protein_coding retained_intron MGP_BALBcJ_T0002609.1 MGP_BALBcJ_G0002503.1 mouse_genomes_project 14 45952404 45952679 + MGP_BALBcJ_P0002609 TR_V_gene TR_V_gene MGP_BALBcJ_T0000899.1 MGP_BALBcJ_G0000830.1 mouse_genomes_project 14 14557540 14561205 + TEC TEC MGP_BALBcJ_T0100692.1 MGP_BALBcJ_G0038728.1 mouse_genomes_project 14 51756039 51756172 - Gm25614 snoRNA snoRNA MGP_BALBcJ_T0039322.1 MGP_BALBcJ_G0021260.1 mouse_genomes_project 14 45302873 45303815 - MGP_BALBcJ_P0039322 Olfr1512 protein_coding protein_coding MGP_BALBcJ_T0040087.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67770974 67789563 + MGP_BALBcJ_P0040087 Esd protein_coding protein_coding MGP_BALBcJ_T0040088.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67771046 67781326 + Esd protein_coding retained_intron MGP_BALBcJ_T0040089.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67771048 67778183 + Esd protein_coding processed_transcript MGP_BALBcJ_T0040090.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67771084 67784304 + MGP_BALBcJ_P0040090 Esd protein_coding protein_coding MGP_BALBcJ_T0040091.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67771111 67788566 + MGP_BALBcJ_P0040091 Esd protein_coding protein_coding MGP_BALBcJ_T0040092.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67774629 67788443 + MGP_BALBcJ_P0040092 Esd protein_coding protein_coding MGP_BALBcJ_T0040093.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67774629 67788502 + MGP_BALBcJ_P0040093 Esd protein_coding protein_coding MGP_BALBcJ_T0040094.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67777170 67782275 + Esd protein_coding retained_intron MGP_BALBcJ_T0040095.1 MGP_BALBcJ_G0021528.1 mouse_genomes_project 14 67777233 67788473 + MGP_BALBcJ_P0040095 Esd protein_coding protein_coding MGP_BALBcJ_T0002614.1 MGP_BALBcJ_G0002508.1 mouse_genomes_project 14 46172857 46541796 + MGP_BALBcJ_P0002614 TR_V_gene TR_V_gene MGP_BALBcJ_T0039971.1 MGP_BALBcJ_G0021490.1 mouse_genomes_project 14 62782620 62799296 + MGP_BALBcJ_P0039971 Tnfrsf10b protein_coding protein_coding MGP_BALBcJ_T0017391.1 MGP_BALBcJ_G0015223.1 mouse_genomes_project 14 112822632 112838949 + Gm16835 processed_transcript processed_transcript MGP_BALBcJ_T0000909.1 MGP_BALBcJ_G0000840.1 mouse_genomes_project 14 54801358 54805410 - TEC TEC MGP_BALBcJ_T0039006.1 MGP_BALBcJ_G0021162.1 mouse_genomes_project 14 38912541 38916550 + Gm15217 protein_coding processed_transcript MGP_BALBcJ_T0039007.1 MGP_BALBcJ_G0021162.1 mouse_genomes_project 14 38912594 38916740 + MGP_BALBcJ_P0039007 Gm15217 protein_coding protein_coding MGP_BALBcJ_T0039008.1 MGP_BALBcJ_G0021162.1 mouse_genomes_project 14 38914252 38916500 + Gm15217 protein_coding processed_transcript MGP_BALBcJ_T0038772.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23941561 24032862 - MGP_BALBcJ_P0038772 Hacl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038776.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23989640 24032928 - MGP_BALBcJ_P0038776 Hacl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038777.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23998442 24032948 - MGP_BALBcJ_P0038777 Hacl1 protein_coding protein_coding MGP_BALBcJ_T0038778.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23998927 24005520 - Hacl1 protein_coding processed_transcript MGP_BALBcJ_T0038779.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23999231 24001537 - Hacl1 protein_coding processed_transcript MGP_BALBcJ_T0038780.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23999273 24032896 - MGP_BALBcJ_P0038780 Hacl1 protein_coding protein_coding MGP_BALBcJ_T0038781.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23999273 24032862 - MGP_BALBcJ_P0038781 Hacl1 protein_coding protein_coding MGP_BALBcJ_T0038782.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23999273 24032862 - MGP_BALBcJ_P0038782 Hacl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038783.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 23999273 24032862 - MGP_BALBcJ_P0038783 Hacl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038784.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 24017681 24033156 - MGP_BALBcJ_P0038784 Hacl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038785.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 24021018 24033241 - MGP_BALBcJ_P0038785 Hacl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038786.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 24021830 24032930 - Hacl1 protein_coding retained_intron MGP_BALBcJ_T0038787.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 24026787 24032895 - Hacl1 protein_coding retained_intron MGP_BALBcJ_T0038788.1 MGP_BALBcJ_G0021084.1 mouse_genomes_project 14 24026926 24033270 - Hacl1 protein_coding retained_intron MGP_BALBcJ_T0003527.1 MGP_BALBcJ_G0003209.1 mouse_genomes_project 14 47059288 47117330 - Gm42877 antisense antisense MGP_BALBcJ_T0003528.1 MGP_BALBcJ_G0003209.1 mouse_genomes_project 14 47096756 47117390 - Gm42877 antisense antisense MGP_BALBcJ_T0039662.1 MGP_BALBcJ_G0021371.1 mouse_genomes_project 14 50635496 50653862 + MGP_BALBcJ_P0039662 protein_coding protein_coding MGP_BALBcJ_T0039443.1 MGP_BALBcJ_G0021295.1 mouse_genomes_project 14 47927806 47930948 + MGP_BALBcJ_P0039443 Il25 protein_coding protein_coding MGP_BALBcJ_T0017361.1 MGP_BALBcJ_G0015209.1 mouse_genomes_project 14 59487633 59489432 - 1700001G11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017362.1 MGP_BALBcJ_G0015209.1 mouse_genomes_project 14 59487634 59489243 - 1700001G11Rik processed_transcript processed_transcript MGP_BALBcJ_T0017363.1 MGP_BALBcJ_G0015209.1 mouse_genomes_project 14 59487794 59489186 - 1700001G11Rik processed_transcript processed_transcript MGP_BALBcJ_T0011355.1 MGP_BALBcJ_G0009480.1 mouse_genomes_project 14 54771955 54772092 + Gm27972 misc_RNA misc_RNA MGP_BALBcJ_T0099415.1 MGP_BALBcJ_G0037451.1 mouse_genomes_project 14 48694720 48694804 - Gm25887 snRNA snRNA MGP_BALBcJ_T0040027.1 MGP_BALBcJ_G0021513.1 mouse_genomes_project 14 63679607 63685388 - MGP_BALBcJ_P0040027 Npm2 protein_coding protein_coding MGP_BALBcJ_T0002645.1 MGP_BALBcJ_G0002531.1 mouse_genomes_project 14 47066569 47067180 + MGP_BALBcJ_P0002645 Trdv4 TR_V_gene TR_V_gene MGP_BALBcJ_T0011348.1 MGP_BALBcJ_G0009473.1 mouse_genomes_project 14 28028464 28028632 + Gm27617 misc_RNA misc_RNA MGP_BALBcJ_T0039973.1 MGP_BALBcJ_G0021492.1 mouse_genomes_project 14 62860885 63083127 + MGP_BALBcJ_P0039973 Pebp4 protein_coding protein_coding MGP_BALBcJ_T0038630.1 MGP_BALBcJ_G0021056.1 mouse_genomes_project 14 22890313 22891091 + Tkt protein_coding processed_transcript MGP_BALBcJ_T0038631.1 MGP_BALBcJ_G0021056.1 mouse_genomes_project 14 22891085 22916633 + MGP_BALBcJ_P0038631 Tkt protein_coding protein_coding MGP_BALBcJ_T0038632.1 MGP_BALBcJ_G0021056.1 mouse_genomes_project 14 22891135 22904349 + Tkt protein_coding retained_intron MGP_BALBcJ_T0038633.1 MGP_BALBcJ_G0021056.1 mouse_genomes_project 14 22891165 22902553 + MGP_BALBcJ_P0038633 Tkt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038634.1 MGP_BALBcJ_G0021056.1 mouse_genomes_project 14 22911395 22912711 + Tkt protein_coding retained_intron MGP_BALBcJ_T0003565.1 MGP_BALBcJ_G0003236.1 mouse_genomes_project 14 97239726 97246186 - Slain1os antisense antisense MGP_BALBcJ_T0039515.1 MGP_BALBcJ_G0021313.1 mouse_genomes_project 14 48568414 48569750 + MGP_BALBcJ_P0039515 Fitm1 protein_coding protein_coding MGP_BALBcJ_T0003546.1 MGP_BALBcJ_G0003222.1 mouse_genomes_project 14 56659349 56665542 + Gm17232 antisense antisense MGP_BALBcJ_T0038535.1 MGP_BALBcJ_G0021024.1 mouse_genomes_project 14 18497464 18501137 - MGP_BALBcJ_P0038535 protein_coding protein_coding MGP_BALBcJ_T0038538.1 MGP_BALBcJ_G0021024.1 mouse_genomes_project 14 18497634 18500715 - MGP_BALBcJ_P0038538 protein_coding protein_coding MGP_BALBcJ_T0038539.1 MGP_BALBcJ_G0021024.1 mouse_genomes_project 14 18498214 18501108 - MGP_BALBcJ_P0038539 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038540.1 MGP_BALBcJ_G0021024.1 mouse_genomes_project 14 18498221 18499253 - protein_coding retained_intron MGP_BALBcJ_T0038367.1 MGP_BALBcJ_G0020981.1 mouse_genomes_project 14 12829164 12835632 - MGP_BALBcJ_P0038367 Kcnk16 protein_coding protein_coding MGP_BALBcJ_T0038988.1 MGP_BALBcJ_G0021157.1 mouse_genomes_project 14 37844985 37864869 + MGP_BALBcJ_P0038988 Psmc6 protein_coding protein_coding MGP_BALBcJ_T0039167.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43658456 43662019 - MGP_BALBcJ_P0039167 Tmem55b protein_coding protein_coding MGP_BALBcJ_T0039168.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43658461 43662100 - MGP_BALBcJ_P0039168 Tmem55b protein_coding protein_coding MGP_BALBcJ_T0039169.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43658463 43662095 - Tmem55b protein_coding retained_intron MGP_BALBcJ_T0039170.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43659112 43660456 - MGP_BALBcJ_P0039170 Tmem55b protein_coding protein_coding MGP_BALBcJ_T0039171.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43660072 43662047 - MGP_BALBcJ_P0039171 Tmem55b protein_coding protein_coding MGP_BALBcJ_T0039172.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43660168 43662077 - Tmem55b protein_coding retained_intron MGP_BALBcJ_T0039173.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43660270 43661010 - Tmem55b protein_coding retained_intron MGP_BALBcJ_T0039174.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43660504 43662082 - Tmem55b protein_coding retained_intron MGP_BALBcJ_T0039175.1 MGP_BALBcJ_G0021221.1 mouse_genomes_project 14 43660581 43662044 - Tmem55b protein_coding retained_intron MGP_BALBcJ_T0002632.1 MGP_BALBcJ_G0002522.1 mouse_genomes_project 14 46778089 46778696 + MGP_BALBcJ_P0002632 B230359F08Rik TR_V_gene TR_V_gene MGP_BALBcJ_T0038342.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10937077 11242014 - MGP_BALBcJ_P0038342 Ube2e2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038343.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10937079 11247341 - MGP_BALBcJ_P0038343 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038344.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10937543 11241862 - MGP_BALBcJ_P0038344 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038345.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10937796 11242006 - MGP_BALBcJ_P0038345 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038346.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10937865 10967174 - Ube2e2 protein_coding processed_transcript MGP_BALBcJ_T0038347.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10937865 11241958 - MGP_BALBcJ_P0038347 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038348.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10953353 11031942 - Ube2e2 protein_coding processed_transcript MGP_BALBcJ_T0038349.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10953353 11246978 - MGP_BALBcJ_P0038349 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038350.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10967066 11247283 - Ube2e2 protein_coding processed_transcript MGP_BALBcJ_T0038351.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10998592 11247210 - MGP_BALBcJ_P0038351 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038352.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10998604 11247818 - MGP_BALBcJ_P0038352 Ube2e2 protein_coding protein_coding MGP_BALBcJ_T0038353.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 10998662 11247210 - Ube2e2 protein_coding processed_transcript MGP_BALBcJ_T0038354.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 11006641 11247258 - Ube2e2 protein_coding processed_transcript MGP_BALBcJ_T0038355.1 MGP_BALBcJ_G0020974.1 mouse_genomes_project 14 11239929 11246843 - Ube2e2 protein_coding retained_intron MGP_BALBcJ_T0009994.1 MGP_BALBcJ_G0008119.1 mouse_genomes_project 14 99374941 99375034 + Gm22406 miRNA miRNA MGP_BALBcJ_T0040122.1 MGP_BALBcJ_G0021540.1 mouse_genomes_project 14 68903944 68907197 + MGP_BALBcJ_P0040122 Tpt1 protein_coding protein_coding MGP_BALBcJ_T0040123.1 MGP_BALBcJ_G0021540.1 mouse_genomes_project 14 68904153 68907307 + MGP_BALBcJ_P0040123 Tpt1 protein_coding protein_coding MGP_BALBcJ_T0040124.1 MGP_BALBcJ_G0021540.1 mouse_genomes_project 14 68904182 68905658 + Tpt1 protein_coding retained_intron MGP_BALBcJ_T0040125.1 MGP_BALBcJ_G0021540.1 mouse_genomes_project 14 68904183 68904821 + Tpt1 protein_coding retained_intron MGP_BALBcJ_T0039641.1 MGP_BALBcJ_G0021359.1 mouse_genomes_project 14 49798628 49855258 - MGP_BALBcJ_P0039641 Pspc1 protein_coding protein_coding MGP_BALBcJ_T0039642.1 MGP_BALBcJ_G0021359.1 mouse_genomes_project 14 49800173 49855258 - MGP_BALBcJ_P0039642 Pspc1 protein_coding protein_coding MGP_BALBcJ_T0039643.1 MGP_BALBcJ_G0021359.1 mouse_genomes_project 14 49824764 49837886 - Pspc1 protein_coding retained_intron MGP_BALBcJ_T0039644.1 MGP_BALBcJ_G0021359.1 mouse_genomes_project 14 49825087 49854869 - MGP_BALBcJ_P0039644 Pspc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038549.1 MGP_BALBcJ_G0021029.1 mouse_genomes_project 14 18552614 18557284 + protein_coding processed_transcript MGP_BALBcJ_T0038554.1 MGP_BALBcJ_G0021029.1 mouse_genomes_project 14 18554410 18561306 + protein_coding processed_transcript MGP_BALBcJ_T0038556.1 MGP_BALBcJ_G0021029.1 mouse_genomes_project 14 18556781 18563936 + MGP_BALBcJ_P0038556 protein_coding protein_coding MGP_BALBcJ_T0039632.1 MGP_BALBcJ_G0021356.1 mouse_genomes_project 14 49603384 49647502 - MGP_BALBcJ_P0039632 Cenpj protein_coding protein_coding MGP_BALBcJ_T0039633.1 MGP_BALBcJ_G0021356.1 mouse_genomes_project 14 49603406 49640737 - MGP_BALBcJ_P0039633 Cenpj protein_coding unknown_likely_coding MGP_BALBcJ_T0039459.1 MGP_BALBcJ_G0021302.1 mouse_genomes_project 14 48058338 48090371 - MGP_BALBcJ_P0039459 Zfhx2 protein_coding protein_coding MGP_BALBcJ_T0039460.1 MGP_BALBcJ_G0021302.1 mouse_genomes_project 14 48064279 48070283 - Zfhx2 protein_coding retained_intron MGP_BALBcJ_T0039461.1 MGP_BALBcJ_G0021302.1 mouse_genomes_project 14 48072620 48078502 - Zfhx2 protein_coding retained_intron MGP_BALBcJ_T0039462.1 MGP_BALBcJ_G0021302.1 mouse_genomes_project 14 48087618 48090089 - Zfhx2 protein_coding retained_intron MGP_BALBcJ_T0100716.1 MGP_BALBcJ_G0038752.1 mouse_genomes_project 14 94097759 94097883 - Gm24345 snoRNA snoRNA MGP_BALBcJ_T0040223.1 MGP_BALBcJ_G0021584.1 mouse_genomes_project 14 94757408 94759788 - MGP_BALBcJ_P0040223 Prr30 protein_coding protein_coding MGP_BALBcJ_T0040224.1 MGP_BALBcJ_G0021584.1 mouse_genomes_project 14 94757416 94760049 - MGP_BALBcJ_P0040224 Prr30 protein_coding protein_coding MGP_BALBcJ_T0040213.1 MGP_BALBcJ_G0021576.1 mouse_genomes_project 14 89615707 90019321 - MGP_BALBcJ_P0040213 Klhl1 protein_coding protein_coding MGP_BALBcJ_T0099425.1 MGP_BALBcJ_G0037461.1 mouse_genomes_project 14 79562428 79562518 - Gm23926 snRNA snRNA MGP_BALBcJ_T0002633.1 MGP_BALBcJ_G0002523.1 mouse_genomes_project 14 46793955 46794432 + MGP_BALBcJ_P0002633 Trav17 TR_V_gene TR_V_gene MGP_BALBcJ_T0002634.1 MGP_BALBcJ_G0002523.1 mouse_genomes_project 14 46793955 46794432 + MGP_BALBcJ_P0002634 Trav17 TR_V_gene TR_V_gene MGP_BALBcJ_T0038287.1 MGP_BALBcJ_G0020954.1 mouse_genomes_project 14 6183481 6290282 - MGP_BALBcJ_P0038287 Gm281 protein_coding protein_coding MGP_BALBcJ_T0003506.1 MGP_BALBcJ_G0003189.1 mouse_genomes_project 14 15617688 15674903 - Gm10248 antisense antisense MGP_BALBcJ_T0039766.1 MGP_BALBcJ_G0021404.1 mouse_genomes_project 14 54462257 54482675 - MGP_BALBcJ_P0039766 Ebpl protein_coding protein_coding MGP_BALBcJ_T0002550.1 MGP_BALBcJ_G0002453.1 mouse_genomes_project 14 47206880 47206946 + MGP_BALBcJ_P0002550 Traj2 TR_J_gene TR_J_gene MGP_BALBcJ_T0039350.1 MGP_BALBcJ_G0021269.1 mouse_genomes_project 14 47341187 47344876 + Oxa1l protein_coding retained_intron MGP_BALBcJ_T0039351.1 MGP_BALBcJ_G0021269.1 mouse_genomes_project 14 47341187 47350577 + MGP_BALBcJ_P0039351 Oxa1l protein_coding protein_coding MGP_BALBcJ_T0039352.1 MGP_BALBcJ_G0021269.1 mouse_genomes_project 14 47341391 47347939 + Oxa1l protein_coding retained_intron MGP_BALBcJ_T0100703.1 MGP_BALBcJ_G0038739.1 mouse_genomes_project 14 71705974 71706096 + Gm26251 snoRNA snoRNA MGP_BALBcJ_T0003551.1 MGP_BALBcJ_G0003227.1 mouse_genomes_project 14 62396602 62404608 - 1700092C10Rik antisense antisense MGP_BALBcJ_T0100718.1 MGP_BALBcJ_G0038754.1 mouse_genomes_project 14 95882951 95883083 - Gm22347 snoRNA snoRNA MGP_BALBcJ_T0003537.1 MGP_BALBcJ_G0003217.1 mouse_genomes_project 14 49683026 49696226 - Gm16573 antisense antisense MGP_BALBcJ_T0003538.1 MGP_BALBcJ_G0003217.1 mouse_genomes_project 14 49686553 49696242 - Gm16573 antisense antisense MGP_BALBcJ_T0003539.1 MGP_BALBcJ_G0003217.1 mouse_genomes_project 14 49693279 49696242 - Gm16573 antisense antisense MGP_BALBcJ_T0002588.1 MGP_BALBcJ_G0002486.1 mouse_genomes_project 14 45513049 45513903 + MGP_BALBcJ_P0002588 Trav2 TR_V_gene TR_V_gene MGP_BALBcJ_T0002589.1 MGP_BALBcJ_G0002486.1 mouse_genomes_project 14 45513144 45513903 + MGP_BALBcJ_P0002589 Trav2 TR_V_gene TR_V_gene MGP_BALBcJ_T0002603.1 MGP_BALBcJ_G0002498.1 mouse_genomes_project 14 45803282 45803920 + MGP_BALBcJ_P0002603 TR_V_gene TR_V_gene MGP_BALBcJ_T0040351.1 MGP_BALBcJ_G0021628.1 mouse_genomes_project 14 115204755 115255957 - MGP_BALBcJ_P0040351 Slc15a1 protein_coding protein_coding MGP_BALBcJ_T0038359.1 MGP_BALBcJ_G0020978.1 mouse_genomes_project 14 12433460 12541289 - MGP_BALBcJ_P0038359 Gng2 protein_coding protein_coding MGP_BALBcJ_T0038360.1 MGP_BALBcJ_G0020978.1 mouse_genomes_project 14 12436556 12541212 - MGP_BALBcJ_P0038360 Gng2 protein_coding protein_coding MGP_BALBcJ_T0038361.1 MGP_BALBcJ_G0020978.1 mouse_genomes_project 14 12436556 12541667 - MGP_BALBcJ_P0038361 Gng2 protein_coding protein_coding MGP_BALBcJ_T0038362.1 MGP_BALBcJ_G0020978.1 mouse_genomes_project 14 12436597 12541099 - MGP_BALBcJ_P0038362 Gng2 protein_coding protein_coding MGP_BALBcJ_T0038363.1 MGP_BALBcJ_G0020978.1 mouse_genomes_project 14 12436640 12541224 - MGP_BALBcJ_P0038363 Gng2 protein_coding protein_coding MGP_BALBcJ_T0038364.1 MGP_BALBcJ_G0020978.1 mouse_genomes_project 14 12436694 12540733 - MGP_BALBcJ_P0038364 Gng2 protein_coding protein_coding MGP_BALBcJ_T0002483.1 MGP_BALBcJ_G0002392.1 mouse_genomes_project 14 47209573 47216213 + MGP_BALBcJ_P0002483 Trac TR_C_gene TR_C_gene MGP_BALBcJ_T0002484.1 MGP_BALBcJ_G0002392.1 mouse_genomes_project 14 47209573 47215130 + MGP_BALBcJ_P0002484 Trac TR_C_gene TR_C_gene MGP_BALBcJ_T0039570.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48644776 48652063 - MGP_BALBcJ_P0039570 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039571.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48644776 48652618 - MGP_BALBcJ_P0039571 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039572.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48644779 48652127 - MGP_BALBcJ_P0039572 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039573.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48644823 48652166 - MGP_BALBcJ_P0039573 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039574.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48644827 48652173 - MGP_BALBcJ_P0039574 Tm9sf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039575.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48644871 48652152 - MGP_BALBcJ_P0039575 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039576.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48646644 48652335 - MGP_BALBcJ_P0039576 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039577.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48647112 48649872 - Tm9sf1 protein_coding processed_transcript MGP_BALBcJ_T0039578.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48648907 48652183 - Tm9sf1 protein_coding retained_intron MGP_BALBcJ_T0039579.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48649196 48652372 - Tm9sf1 protein_coding processed_transcript MGP_BALBcJ_T0039580.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48649255 48650411 - Tm9sf1 protein_coding retained_intron MGP_BALBcJ_T0039581.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48650229 48652583 - MGP_BALBcJ_P0039581 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039582.1 MGP_BALBcJ_G0021321.1 mouse_genomes_project 14 48651395 48652145 - MGP_BALBcJ_P0039582 Tm9sf1 protein_coding protein_coding MGP_BALBcJ_T0039492.1 MGP_BALBcJ_G0021309.1 mouse_genomes_project 14 48509622 48516560 - MGP_BALBcJ_P0039492 Nrl protein_coding protein_coding MGP_BALBcJ_T0039493.1 MGP_BALBcJ_G0021309.1 mouse_genomes_project 14 48510172 48517350 - MGP_BALBcJ_P0039493 Nrl protein_coding protein_coding MGP_BALBcJ_T0039494.1 MGP_BALBcJ_G0021309.1 mouse_genomes_project 14 48510172 48517334 - MGP_BALBcJ_P0039494 Nrl protein_coding protein_coding MGP_BALBcJ_T0039102.1 MGP_BALBcJ_G0021181.1 mouse_genomes_project 14 41656497 41677453 + MGP_BALBcJ_P0039102 Ap5m1 protein_coding protein_coding MGP_BALBcJ_T0040214.1 MGP_BALBcJ_G0021577.1 mouse_genomes_project 14 91321388 91705238 - MGP_BALBcJ_P0040214 Dach1 protein_coding protein_coding MGP_BALBcJ_T0040215.1 MGP_BALBcJ_G0021577.1 mouse_genomes_project 14 91321388 91705238 - MGP_BALBcJ_P0040215 Dach1 protein_coding protein_coding MGP_BALBcJ_T0040216.1 MGP_BALBcJ_G0021577.1 mouse_genomes_project 14 91360144 91705472 - Dach1 protein_coding retained_intron MGP_BALBcJ_T0039624.1 MGP_BALBcJ_G0021348.1 mouse_genomes_project 14 49180723 49183771 - MGP_BALBcJ_P0039624 Gzmd protein_coding protein_coding MGP_BALBcJ_T0009960.1 MGP_BALBcJ_G0008085.1 mouse_genomes_project 14 37453131 37453200 - Mir327 miRNA miRNA MGP_BALBcJ_T0038912.1 MGP_BALBcJ_G0021128.1 mouse_genomes_project 14 26977170 26988353 - MGP_BALBcJ_P0038912 9230112D13Rik protein_coding protein_coding MGP_BALBcJ_T0010003.1 MGP_BALBcJ_G0008128.1 mouse_genomes_project 14 111649249 111649354 - Mir6239 miRNA miRNA MGP_BALBcJ_T0006655.1 MGP_BALBcJ_G0005498.1 mouse_genomes_project 14 20822725 20826046 - Gm2670 lincRNA lincRNA MGP_BALBcJ_T0002509.1 MGP_BALBcJ_G0002412.1 mouse_genomes_project 14 47160569 47160626 + MGP_BALBcJ_P0002509 Traj47 TR_J_gene TR_J_gene MGP_BALBcJ_T0038473.1 MGP_BALBcJ_G0021011.1 mouse_genomes_project 14 14583693 15635576 + MGP_BALBcJ_P0038473 1700112E06Rik protein_coding protein_coding MGP_BALBcJ_T0038474.1 MGP_BALBcJ_G0021011.1 mouse_genomes_project 14 14583802 15400939 + MGP_BALBcJ_P0038474 1700112E06Rik protein_coding protein_coding MGP_BALBcJ_T0038475.1 MGP_BALBcJ_G0021011.1 mouse_genomes_project 14 14583829 15635576 + MGP_BALBcJ_P0038475 1700112E06Rik protein_coding protein_coding MGP_BALBcJ_T0038476.1 MGP_BALBcJ_G0021011.1 mouse_genomes_project 14 14583829 15286095 + MGP_BALBcJ_P0038476 1700112E06Rik protein_coding protein_coding MGP_BALBcJ_T0038477.1 MGP_BALBcJ_G0021011.1 mouse_genomes_project 14 14882593 15152173 + 1700112E06Rik protein_coding processed_transcript MGP_BALBcJ_T0038478.1 MGP_BALBcJ_G0021011.1 mouse_genomes_project 14 15145467 15166993 + 1700112E06Rik protein_coding processed_transcript MGP_BALBcJ_T0038396.1 MGP_BALBcJ_G0020991.1 mouse_genomes_project 14 13106275 13176390 - MGP_BALBcJ_P0038396 Usp54 protein_coding protein_coding MGP_BALBcJ_T0038397.1 MGP_BALBcJ_G0020991.1 mouse_genomes_project 14 13106275 13165280 - MGP_BALBcJ_P0038397 Usp54 protein_coding protein_coding MGP_BALBcJ_T0038398.1 MGP_BALBcJ_G0020991.1 mouse_genomes_project 14 13134529 13143410 - MGP_BALBcJ_P0038398 Usp54 protein_coding protein_coding MGP_BALBcJ_T0038399.1 MGP_BALBcJ_G0020991.1 mouse_genomes_project 14 13138518 13163382 - Usp54 protein_coding retained_intron MGP_BALBcJ_T0038400.1 MGP_BALBcJ_G0020991.1 mouse_genomes_project 14 13140574 13176390 - Usp54 protein_coding retained_intron MGP_BALBcJ_T0039802.1 MGP_BALBcJ_G0021423.1 mouse_genomes_project 14 56333616 56344319 - MGP_BALBcJ_P0039802 Neil2 protein_coding protein_coding MGP_BALBcJ_T0013007.1 MGP_BALBcJ_G0011104.1 mouse_genomes_project 14 91654438 91654936 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0039516.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48570920 48574144 + MGP_BALBcJ_P0039516 Psme1 protein_coding protein_coding MGP_BALBcJ_T0039517.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571157 48574326 + MGP_BALBcJ_P0039517 Psme1 protein_coding protein_coding MGP_BALBcJ_T0039518.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571202 48573440 + Psme1 protein_coding retained_intron MGP_BALBcJ_T0039519.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571253 48574326 + Psme1 protein_coding retained_intron MGP_BALBcJ_T0039520.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571265 48574172 + Psme1 protein_coding retained_intron MGP_BALBcJ_T0039521.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571283 48573201 + Psme1 protein_coding retained_intron MGP_BALBcJ_T0039522.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571335 48573740 + MGP_BALBcJ_P0039522 Psme1 protein_coding protein_coding MGP_BALBcJ_T0039523.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571372 48574179 + MGP_BALBcJ_P0039523 Psme1 protein_coding protein_coding MGP_BALBcJ_T0039524.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48571372 48574179 + MGP_BALBcJ_P0039524 Psme1 protein_coding protein_coding MGP_BALBcJ_T0039525.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48572761 48574249 + Psme1 protein_coding retained_intron MGP_BALBcJ_T0039526.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48572831 48573745 + Psme1 protein_coding retained_intron MGP_BALBcJ_T0039527.1 MGP_BALBcJ_G0021314.1 mouse_genomes_project 14 48573545 48574327 + MGP_BALBcJ_P0039527 Psme1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038608.1 MGP_BALBcJ_G0021047.1 mouse_genomes_project 14 20820542 20823773 + Wnt5a protein_coding processed_transcript MGP_BALBcJ_T0038609.1 MGP_BALBcJ_G0021047.1 mouse_genomes_project 14 20820751 20844052 + MGP_BALBcJ_P0038609 Wnt5a protein_coding protein_coding MGP_BALBcJ_T0038610.1 MGP_BALBcJ_G0021047.1 mouse_genomes_project 14 20825271 20826579 + Wnt5a protein_coding processed_transcript MGP_BALBcJ_T0038611.1 MGP_BALBcJ_G0021047.1 mouse_genomes_project 14 20826043 20842036 + Wnt5a protein_coding processed_transcript MGP_BALBcJ_T0038612.1 MGP_BALBcJ_G0021047.1 mouse_genomes_project 14 20826104 20826561 + Wnt5a protein_coding processed_transcript MGP_BALBcJ_T0038598.1 MGP_BALBcJ_G0021040.1 mouse_genomes_project 14 19318772 19320770 + MGP_BALBcJ_P0038598 Hesx1 protein_coding protein_coding MGP_BALBcJ_T0100682.1 MGP_BALBcJ_G0038718.1 mouse_genomes_project 14 29067694 29067817 + Gm24394 snoRNA snoRNA MGP_BALBcJ_T0040219.1 MGP_BALBcJ_G0021580.1 mouse_genomes_project 14 92644105 92667233 - MGP_BALBcJ_P0040219 Dis3 protein_coding protein_coding MGP_BALBcJ_T0039935.1 MGP_BALBcJ_G0021473.1 mouse_genomes_project 14 61319730 61362908 - MGP_BALBcJ_P0039935 Nefm protein_coding protein_coding MGP_BALBcJ_T0039937.1 MGP_BALBcJ_G0021473.1 mouse_genomes_project 14 61357407 61362908 - MGP_BALBcJ_P0039937 Nefm protein_coding protein_coding MGP_BALBcJ_T0000919.1 MGP_BALBcJ_G0000850.1 mouse_genomes_project 14 82746137 82746572 + TEC TEC MGP_BALBcJ_T0038653.1 MGP_BALBcJ_G0021059.1 mouse_genomes_project 14 23068161 23168808 + MGP_BALBcJ_P0038653 Sfmbt1 protein_coding protein_coding MGP_BALBcJ_T0038654.1 MGP_BALBcJ_G0021059.1 mouse_genomes_project 14 23068479 23165929 + MGP_BALBcJ_P0038654 Sfmbt1 protein_coding protein_coding MGP_BALBcJ_T0038655.1 MGP_BALBcJ_G0021059.1 mouse_genomes_project 14 23068927 23173595 + MGP_BALBcJ_P0038655 Sfmbt1 protein_coding protein_coding MGP_BALBcJ_T0038656.1 MGP_BALBcJ_G0021059.1 mouse_genomes_project 14 23069871 23169191 + MGP_BALBcJ_P0038656 Sfmbt1 protein_coding protein_coding MGP_BALBcJ_T0038657.1 MGP_BALBcJ_G0021059.1 mouse_genomes_project 14 23128114 23169190 + MGP_BALBcJ_P0038657 Sfmbt1 protein_coding protein_coding MGP_BALBcJ_T0038658.1 MGP_BALBcJ_G0021059.1 mouse_genomes_project 14 23147391 23149147 + Sfmbt1 protein_coding retained_intron MGP_BALBcJ_T0039697.1 MGP_BALBcJ_G0021381.1 mouse_genomes_project 14 52237371 52247009 - MGP_BALBcJ_P0039697 1700129C05Rik protein_coding protein_coding MGP_BALBcJ_T0039698.1 MGP_BALBcJ_G0021381.1 mouse_genomes_project 14 52237570 52247009 - MGP_BALBcJ_P0039698 1700129C05Rik protein_coding protein_coding MGP_BALBcJ_T0039699.1 MGP_BALBcJ_G0021381.1 mouse_genomes_project 14 52237573 52247009 - MGP_BALBcJ_P0039699 1700129C05Rik protein_coding protein_coding MGP_BALBcJ_T0039700.1 MGP_BALBcJ_G0021381.1 mouse_genomes_project 14 52245441 52247009 - MGP_BALBcJ_P0039700 1700129C05Rik protein_coding protein_coding MGP_BALBcJ_T0039650.1 MGP_BALBcJ_G0021365.1 mouse_genomes_project 14 50130346 50154666 - MGP_BALBcJ_P0039650 Gja3 protein_coding protein_coding MGP_BALBcJ_T0040403.1 MGP_BALBcJ_G0021646.1 mouse_genomes_project 14 117790412 117792253 + MGP_BALBcJ_P0040403 protein_coding protein_coding MGP_BALBcJ_T0039153.1 MGP_BALBcJ_G0021217.1 mouse_genomes_project 14 43620411 43622278 - MGP_BALBcJ_P0039153 Klhl33 protein_coding protein_coding MGP_BALBcJ_T0039140.1 MGP_BALBcJ_G0021204.1 mouse_genomes_project 14 43125251 43126181 + MGP_BALBcJ_P0039140 protein_coding protein_coding MGP_BALBcJ_T0039418.1 MGP_BALBcJ_G0021285.1 mouse_genomes_project 14 47674012 47678584 + MGP_BALBcJ_P0039418 1700123O20Rik protein_coding protein_coding MGP_BALBcJ_T0098505.1 MGP_BALBcJ_G0036559.1 mouse_genomes_project 14 59782915 59783005 - Gm23899 rRNA rRNA MGP_BALBcJ_T0038970.1 MGP_BALBcJ_G0021150.1 mouse_genomes_project 14 33653606 33661042 + MGP_BALBcJ_P0038970 Mbl1 protein_coding protein_coding MGP_BALBcJ_T0039702.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52303807 52326593 + MGP_BALBcJ_P0039702 Rcbtb1 protein_coding protein_coding MGP_BALBcJ_T0039703.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52303826 52340626 + MGP_BALBcJ_P0039703 Rcbtb1 protein_coding protein_coding MGP_BALBcJ_T0039704.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52303832 52338904 + MGP_BALBcJ_P0039704 Rcbtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039705.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52303840 52340626 + MGP_BALBcJ_P0039705 Rcbtb1 protein_coding protein_coding MGP_BALBcJ_T0039706.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52304074 52312570 + MGP_BALBcJ_P0039706 Rcbtb1 protein_coding protein_coding MGP_BALBcJ_T0039707.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52304081 52325905 + Rcbtb1 protein_coding processed_transcript MGP_BALBcJ_T0039708.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52304101 52312666 + MGP_BALBcJ_P0039708 Rcbtb1 protein_coding protein_coding MGP_BALBcJ_T0039709.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52308211 52333340 + MGP_BALBcJ_P0039709 Rcbtb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039710.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52319755 52328102 + Rcbtb1 protein_coding processed_transcript MGP_BALBcJ_T0039711.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52320983 52340620 + MGP_BALBcJ_P0039711 Rcbtb1 protein_coding protein_coding MGP_BALBcJ_T0039712.1 MGP_BALBcJ_G0021383.1 mouse_genomes_project 14 52325966 52328063 + Rcbtb1 protein_coding retained_intron MGP_BALBcJ_T0038932.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29336684 29430515 - MGP_BALBcJ_P0038932 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038933.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29336684 29430425 - MGP_BALBcJ_P0038933 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038934.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29340588 29368111 - Ccser2 protein_coding processed_transcript MGP_BALBcJ_T0038935.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29340589 29397661 - MGP_BALBcJ_P0038935 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038936.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29340844 29370914 - MGP_BALBcJ_P0038936 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038937.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29340891 29381107 - MGP_BALBcJ_P0038937 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038938.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29341107 29381309 - MGP_BALBcJ_P0038938 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038939.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29341266 29388624 - MGP_BALBcJ_P0038939 Ccser2 protein_coding protein_coding MGP_BALBcJ_T0038940.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29341318 29348109 - Ccser2 protein_coding retained_intron MGP_BALBcJ_T0038941.1 MGP_BALBcJ_G0021135.1 mouse_genomes_project 14 29362538 29402034 - Ccser2 protein_coding processed_transcript MGP_BALBcJ_T0039965.1 MGP_BALBcJ_G0021488.1 mouse_genomes_project 14 62712658 62722800 - MGP_BALBcJ_P0039965 R3hcc1 protein_coding protein_coding MGP_BALBcJ_T0039966.1 MGP_BALBcJ_G0021488.1 mouse_genomes_project 14 62712659 62722709 - MGP_BALBcJ_P0039966 R3hcc1 protein_coding protein_coding MGP_BALBcJ_T0039967.1 MGP_BALBcJ_G0021488.1 mouse_genomes_project 14 62713683 62715373 - R3hcc1 protein_coding retained_intron MGP_BALBcJ_T0039968.1 MGP_BALBcJ_G0021488.1 mouse_genomes_project 14 62718829 62720529 - R3hcc1 protein_coding retained_intron MGP_BALBcJ_T0039969.1 MGP_BALBcJ_G0021488.1 mouse_genomes_project 14 62720840 62722769 - R3hcc1 protein_coding processed_transcript MGP_BALBcJ_T0100675.1 MGP_BALBcJ_G0038711.1 mouse_genomes_project 14 19855780 19855878 - Gm25697 snoRNA snoRNA MGP_BALBcJ_T0040319.1 MGP_BALBcJ_G0021617.1 mouse_genomes_project 14 112498215 112585205 + MGP_BALBcJ_P0040319 Cldn10 protein_coding protein_coding MGP_BALBcJ_T0040320.1 MGP_BALBcJ_G0021617.1 mouse_genomes_project 14 112498225 112585206 + MGP_BALBcJ_P0040320 Cldn10 protein_coding protein_coding MGP_BALBcJ_T0040321.1 MGP_BALBcJ_G0021617.1 mouse_genomes_project 14 112565079 112586166 + MGP_BALBcJ_P0040321 Cldn10 protein_coding protein_coding MGP_BALBcJ_T0017396.1 MGP_BALBcJ_G0015226.1 mouse_genomes_project 14 116702776 116717436 + 4930594M22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017397.1 MGP_BALBcJ_G0015226.1 mouse_genomes_project 14 116702813 116719188 + 4930594M22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017398.1 MGP_BALBcJ_G0015226.1 mouse_genomes_project 14 116702821 116727215 + 4930594M22Rik processed_transcript processed_transcript MGP_BALBcJ_T0002529.1 MGP_BALBcJ_G0002432.1 mouse_genomes_project 14 47183047 47183107 + MGP_BALBcJ_P0002529 Traj26 TR_J_gene TR_J_gene MGP_BALBcJ_T0039132.1 MGP_BALBcJ_G0021199.1 mouse_genomes_project 14 43036168 43037119 - Olfr735 protein_coding transcribed_unprocessed_pseudogene MGP_BALBcJ_T0039133.1 MGP_BALBcJ_G0021199.1 mouse_genomes_project 14 43036168 43037233 - MGP_BALBcJ_P0039133 Olfr735 protein_coding protein_coding MGP_BALBcJ_T0039134.1 MGP_BALBcJ_G0021199.1 mouse_genomes_project 14 43036571 43040742 - Olfr735 protein_coding processed_transcript MGP_BALBcJ_T0038899.1 MGP_BALBcJ_G0021123.1 mouse_genomes_project 14 26772479 26809870 + MGP_BALBcJ_P0038899 Glud1 protein_coding protein_coding MGP_BALBcJ_T0038900.1 MGP_BALBcJ_G0021123.1 mouse_genomes_project 14 26772650 26806703 + MGP_BALBcJ_P0038900 Glud1 protein_coding unknown_likely_coding MGP_BALBcJ_T0038901.1 MGP_BALBcJ_G0021123.1 mouse_genomes_project 14 26790306 26795883 + Glud1 protein_coding retained_intron MGP_BALBcJ_T0038902.1 MGP_BALBcJ_G0021123.1 mouse_genomes_project 14 26793858 26801290 + Glud1 protein_coding processed_transcript MGP_BALBcJ_T0038903.1 MGP_BALBcJ_G0021123.1 mouse_genomes_project 14 26795925 26805147 + MGP_BALBcJ_P0038903 Glud1 protein_coding protein_coding MGP_BALBcJ_T0038904.1 MGP_BALBcJ_G0021123.1 mouse_genomes_project 14 26797031 26804937 + Glud1 protein_coding processed_transcript MGP_BALBcJ_T0009999.1 MGP_BALBcJ_G0008124.1 mouse_genomes_project 14 108763823 108763905 + Mir19a miRNA miRNA MGP_BALBcJ_T0039611.1 MGP_BALBcJ_G0021337.1 mouse_genomes_project 14 48876602 48896799 + MGP_BALBcJ_P0039611 Nynrin protein_coding protein_coding MGP_BALBcJ_T0039612.1 MGP_BALBcJ_G0021337.1 mouse_genomes_project 14 48876681 48897243 + MGP_BALBcJ_P0039612 Nynrin protein_coding protein_coding MGP_BALBcJ_T0039613.1 MGP_BALBcJ_G0021338.1 mouse_genomes_project 14 48901230 48906567 - MGP_BALBcJ_P0039613 Cbln3 protein_coding protein_coding MGP_BALBcJ_T0039614.1 MGP_BALBcJ_G0021338.1 mouse_genomes_project 14 48904371 48906543 - MGP_BALBcJ_P0039614 Cbln3 protein_coding protein_coding MGP_BALBcJ_T0002705.1 MGP_BALBcJ_G0002581.1 mouse_genomes_project 14 46926362 46926981 + TR_V_pseudogene TR_V_pseudogene MGP_BALBcJ_T0039977.1 MGP_BALBcJ_G0021496.1 mouse_genomes_project 14 63177854 63182952 - MGP_BALBcJ_P0039977 9930012K11Rik protein_coding protein_coding MGP_BALBcJ_T0039978.1 MGP_BALBcJ_G0021496.1 mouse_genomes_project 14 63177854 63182952 - MGP_BALBcJ_P0039978 9930012K11Rik protein_coding protein_coding MGP_BALBcJ_T0039979.1 MGP_BALBcJ_G0021496.1 mouse_genomes_project 14 63177857 63180368 - 9930012K11Rik protein_coding retained_intron MGP_BALBcJ_T0039980.1 MGP_BALBcJ_G0021496.1 mouse_genomes_project 14 63178347 63179917 - MGP_BALBcJ_P0039980 9930012K11Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0039981.1 MGP_BALBcJ_G0021496.1 mouse_genomes_project 14 63178480 63180260 - 9930012K11Rik protein_coding retained_intron MGP_BALBcJ_T0038670.1 MGP_BALBcJ_G0021063.1 mouse_genomes_project 14 23262698 23278002 - MGP_BALBcJ_P0038670 Itih3 protein_coding unknown_likely_coding MGP_BALBcJ_T0038671.1 MGP_BALBcJ_G0021063.1 mouse_genomes_project 14 23262701 23278213 - MGP_BALBcJ_P0038671 Itih3 protein_coding protein_coding MGP_BALBcJ_T0038672.1 MGP_BALBcJ_G0021063.1 mouse_genomes_project 14 23262704 23278040 - Itih3 protein_coding retained_intron MGP_BALBcJ_T0038673.1 MGP_BALBcJ_G0021063.1 mouse_genomes_project 14 23262811 23278002 - MGP_BALBcJ_P0038673 Itih3 protein_coding protein_coding MGP_BALBcJ_T0038674.1 MGP_BALBcJ_G0021063.1 mouse_genomes_project 14 23263966 23269462 - MGP_BALBcJ_P0038674 Itih3 protein_coding protein_coding MGP_BALBcJ_T0038675.1 MGP_BALBcJ_G0021063.1 mouse_genomes_project 14 23266036 23268204 - Itih3 protein_coding retained_intron MGP_BALBcJ_T0017366.1 MGP_BALBcJ_G0015212.1 mouse_genomes_project 14 60560564 60629913 - 4930438E09Rik processed_transcript processed_transcript MGP_BALBcJ_T0012962.1 MGP_BALBcJ_G0011059.1 mouse_genomes_project 14 18512823 18514012 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102229.1 MGP_BALBcJ_G0040045.1 mouse_genomes_project 13 31057510 31058434 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000868.1 MGP_BALBcJ_G0000800.1 mouse_genomes_project 13 34777666 34778007 - TEC TEC MGP_BALBcJ_T0037578.1 MGP_BALBcJ_G0020725.1 mouse_genomes_project 13 74279052 74350089 - MGP_BALBcJ_P0037578 Rhobtb3 protein_coding protein_coding MGP_BALBcJ_T0037579.1 MGP_BALBcJ_G0020725.1 mouse_genomes_project 13 74281565 74295062 - Rhobtb3 protein_coding processed_transcript MGP_BALBcJ_T0037580.1 MGP_BALBcJ_G0020725.1 mouse_genomes_project 13 74322558 74350147 - MGP_BALBcJ_P0037580 Rhobtb3 protein_coding protein_coding MGP_BALBcJ_T0000878.1 MGP_BALBcJ_G0000809.1 mouse_genomes_project 13 67346493 67348011 + TEC TEC MGP_BALBcJ_T0037331.1 MGP_BALBcJ_G0020613.1 mouse_genomes_project 13 59299945 59305771 - MGP_BALBcJ_P0037331 Ctsm protein_coding protein_coding MGP_BALBcJ_T0011326.1 MGP_BALBcJ_G0009451.1 mouse_genomes_project 13 13677515 13677803 - Gm26098 misc_RNA misc_RNA MGP_BALBcJ_T0037943.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99130848 99162815 - MGP_BALBcJ_P0037943 Gtf2h2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037944.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99131037 99163015 - MGP_BALBcJ_P0037944 Gtf2h2 protein_coding unknown_likely_coding MGP_BALBcJ_T0037945.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99139785 99163038 - MGP_BALBcJ_P0037945 Gtf2h2 protein_coding protein_coding MGP_BALBcJ_T0037946.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99140013 99162844 - Gtf2h2 protein_coding retained_intron MGP_BALBcJ_T0037947.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99140013 99163056 - MGP_BALBcJ_P0037947 Gtf2h2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037948.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99147582 99151212 - Gtf2h2 protein_coding processed_transcript MGP_BALBcJ_T0037949.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99149671 99152130 - Gtf2h2 protein_coding processed_transcript MGP_BALBcJ_T0037950.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99152009 99163056 - MGP_BALBcJ_P0037950 Gtf2h2 protein_coding protein_coding MGP_BALBcJ_T0037951.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99158176 99162851 - Gtf2h2 protein_coding retained_intron MGP_BALBcJ_T0037952.1 MGP_BALBcJ_G0020836.1 mouse_genomes_project 13 99159263 99163030 - Gtf2h2 protein_coding processed_transcript MGP_BALBcJ_T0037919.1 MGP_BALBcJ_G0020831.1 mouse_genomes_project 13 98632829 98719306 - MGP_BALBcJ_P0037919 Bdp1 protein_coding protein_coding MGP_BALBcJ_T0037920.1 MGP_BALBcJ_G0020831.1 mouse_genomes_project 13 98632831 98670468 - MGP_BALBcJ_P0037920 Bdp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037921.1 MGP_BALBcJ_G0020831.1 mouse_genomes_project 13 98638137 98719074 - MGP_BALBcJ_P0037921 Bdp1 protein_coding protein_coding MGP_BALBcJ_T0037922.1 MGP_BALBcJ_G0020831.1 mouse_genomes_project 13 98675658 98680706 - Bdp1 protein_coding retained_intron MGP_BALBcJ_T0037923.1 MGP_BALBcJ_G0020831.1 mouse_genomes_project 13 98692971 98713736 - MGP_BALBcJ_P0037923 Bdp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037924.1 MGP_BALBcJ_G0020831.1 mouse_genomes_project 13 98712697 98719113 - MGP_BALBcJ_P0037924 Bdp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100667.1 MGP_BALBcJ_G0038703.1 mouse_genomes_project 13 105638285 105638351 - Gm24431 snoRNA snoRNA MGP_BALBcJ_T0036610.1 MGP_BALBcJ_G0020364.1 mouse_genomes_project 13 27764416 27769517 - MGP_BALBcJ_P0036610 Uqcrfs1 protein_coding protein_coding MGP_BALBcJ_T0037573.1 MGP_BALBcJ_G0020721.1 mouse_genomes_project 13 73099170 73208460 - MGP_BALBcJ_P0037573 Cast protein_coding protein_coding MGP_BALBcJ_T0036816.1 MGP_BALBcJ_G0020451.1 mouse_genomes_project 13 40918081 40937947 - MGP_BALBcJ_P0036816 Mcur1 protein_coding protein_coding MGP_BALBcJ_T0012891.1 MGP_BALBcJ_G0010988.1 mouse_genomes_project 13 28238977 28239659 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017304.1 MGP_BALBcJ_G0015184.1 mouse_genomes_project 13 18948635 18953667 + Gm11292 processed_transcript processed_transcript MGP_BALBcJ_T0102219.1 MGP_BALBcJ_G0040035.1 mouse_genomes_project 13 30335673 30340833 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037965.1 MGP_BALBcJ_G0020843.1 mouse_genomes_project 13 99366590 99401637 - MGP_BALBcJ_P0037965 Cdk7 protein_coding protein_coding MGP_BALBcJ_T0037006.1 MGP_BALBcJ_G0020511.1 mouse_genomes_project 13 50976811 51021667 - MGP_BALBcJ_P0037006 Sptlc1 protein_coding protein_coding MGP_BALBcJ_T0011324.1 MGP_BALBcJ_G0009449.1 mouse_genomes_project 13 10246261 10246525 + Gm24065 misc_RNA misc_RNA MGP_BALBcJ_T0002582.1 MGP_BALBcJ_G0002482.1 mouse_genomes_project 13 16049722 16050170 + MGP_BALBcJ_P0002582 Tcrg-V5 TR_V_gene TR_V_gene MGP_BALBcJ_T0002583.1 MGP_BALBcJ_G0002482.1 mouse_genomes_project 13 16049877 16050170 + MGP_BALBcJ_P0002583 Tcrg-V5 TR_V_gene TR_V_gene MGP_BALBcJ_T0037894.1 MGP_BALBcJ_G0020816.1 mouse_genomes_project 13 96874018 96903828 + MGP_BALBcJ_P0037894 Gm21976 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037895.1 MGP_BALBcJ_G0020816.1 mouse_genomes_project 13 96874023 96890535 + MGP_BALBcJ_P0037895 Gm21976 protein_coding protein_coding MGP_BALBcJ_T0037896.1 MGP_BALBcJ_G0020816.1 mouse_genomes_project 13 96874069 96903828 + MGP_BALBcJ_P0037896 Gm21976 protein_coding protein_coding MGP_BALBcJ_T0037897.1 MGP_BALBcJ_G0020816.1 mouse_genomes_project 13 96899178 96903766 + MGP_BALBcJ_P0037897 Gm21976 protein_coding protein_coding MGP_BALBcJ_T0100661.1 MGP_BALBcJ_G0038697.1 mouse_genomes_project 13 88566010 88566144 + Gm24507 snoRNA snoRNA MGP_BALBcJ_T0009897.1 MGP_BALBcJ_G0008022.1 mouse_genomes_project 13 18847191 18847280 - Gm44456 miRNA miRNA MGP_BALBcJ_T0009911.1 MGP_BALBcJ_G0008036.1 mouse_genomes_project 13 45994015 45994109 - Mirlet7a-1 miRNA miRNA MGP_BALBcJ_T0003436.1 MGP_BALBcJ_G0003153.1 mouse_genomes_project 13 53469278 53473940 - antisense antisense MGP_BALBcJ_T0003437.1 MGP_BALBcJ_G0003153.1 mouse_genomes_project 13 53470082 53473925 - antisense antisense MGP_BALBcJ_T0003438.1 MGP_BALBcJ_G0003153.1 mouse_genomes_project 13 53470089 53473951 - antisense antisense MGP_BALBcJ_T0098835.1 MGP_BALBcJ_G0036885.1 mouse_genomes_project 13 40380233 40387306 + Gm15809 sense_intronic sense_intronic MGP_BALBcJ_T0036186.1 MGP_BALBcJ_G0020158.1 mouse_genomes_project 13 5492832 5497448 + MGP_BALBcJ_P0036186 protein_coding protein_coding MGP_BALBcJ_T0036187.1 MGP_BALBcJ_G0020158.1 mouse_genomes_project 13 5492882 5498338 + MGP_BALBcJ_P0036187 protein_coding protein_coding MGP_BALBcJ_T0036188.1 MGP_BALBcJ_G0020158.1 mouse_genomes_project 13 5492883 5497490 + MGP_BALBcJ_P0036188 protein_coding protein_coding MGP_BALBcJ_T0036189.1 MGP_BALBcJ_G0020158.1 mouse_genomes_project 13 5493958 5497335 + protein_coding retained_intron MGP_BALBcJ_T0038160.1 MGP_BALBcJ_G0020898.1 mouse_genomes_project 13 111774456 111781611 - MGP_BALBcJ_P0038160 Gzma protein_coding protein_coding MGP_BALBcJ_T0006627.1 MGP_BALBcJ_G0005483.1 mouse_genomes_project 13 117324636 117356098 + 1700003P14Rik lincRNA lincRNA MGP_BALBcJ_T0006628.1 MGP_BALBcJ_G0005483.1 mouse_genomes_project 13 117325428 117356020 + 1700003P14Rik lincRNA lincRNA MGP_BALBcJ_T0006629.1 MGP_BALBcJ_G0005483.1 mouse_genomes_project 13 117325444 117356023 + 1700003P14Rik lincRNA lincRNA MGP_BALBcJ_T0099370.1 MGP_BALBcJ_G0037406.1 mouse_genomes_project 13 37171841 37172006 - Gm23972 snRNA snRNA MGP_BALBcJ_T0102191.1 MGP_BALBcJ_G0040007.1 mouse_genomes_project 13 19427359 19430797 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003419.1 MGP_BALBcJ_G0003138.1 mouse_genomes_project 13 21008133 21017500 + Gm11339 antisense antisense MGP_BALBcJ_T0006561.1 MGP_BALBcJ_G0005434.1 mouse_genomes_project 13 52552369 52552913 + Gm29431 lincRNA lincRNA MGP_BALBcJ_T0037235.1 MGP_BALBcJ_G0020580.1 mouse_genomes_project 13 55965851 56006969 - MGP_BALBcJ_P0037235 Gkap1 protein_coding protein_coding MGP_BALBcJ_T0037394.1 MGP_BALBcJ_G0020632.1 mouse_genomes_project 13 62607194 62625469 - MGP_BALBcJ_P0037394 1190003K10Rik protein_coding protein_coding MGP_BALBcJ_T0099382.1 MGP_BALBcJ_G0037418.1 mouse_genomes_project 13 77871726 77871833 + Gm24863 snRNA snRNA MGP_BALBcJ_T0099385.1 MGP_BALBcJ_G0037421.1 mouse_genomes_project 13 92429397 92429497 + Gm24737 snRNA snRNA MGP_BALBcJ_T0009934.1 MGP_BALBcJ_G0008059.1 mouse_genomes_project 13 90241056 90241136 + Gm27656 miRNA miRNA MGP_BALBcJ_T0037556.1 MGP_BALBcJ_G0020715.1 mouse_genomes_project 13 72624235 72638778 - MGP_BALBcJ_P0037556 Pdcd6 protein_coding protein_coding MGP_BALBcJ_T0102222.1 MGP_BALBcJ_G0040038.1 mouse_genomes_project 13 30804193 30814351 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102207.1 MGP_BALBcJ_G0040023.1 mouse_genomes_project 13 20008059 20008985 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037467.1 MGP_BALBcJ_G0020672.1 mouse_genomes_project 13 65878424 65898731 - MGP_BALBcJ_P0037467 protein_coding protein_coding MGP_BALBcJ_T0037468.1 MGP_BALBcJ_G0020672.1 mouse_genomes_project 13 65884404 65898815 - MGP_BALBcJ_P0037468 protein_coding protein_coding MGP_BALBcJ_T0037469.1 MGP_BALBcJ_G0020672.1 mouse_genomes_project 13 65884498 65898778 - MGP_BALBcJ_P0037469 protein_coding protein_coding MGP_BALBcJ_T0037502.1 MGP_BALBcJ_G0020691.1 mouse_genomes_project 13 69219807 69221363 + MGP_BALBcJ_P0037502 8030423J24Rik protein_coding protein_coding MGP_BALBcJ_T0037669.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83626756 83656781 + MGP_BALBcJ_P0037669 Ccnh protein_coding protein_coding MGP_BALBcJ_T0037670.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83626783 83645661 + MGP_BALBcJ_P0037670 Ccnh protein_coding protein_coding MGP_BALBcJ_T0037671.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83626796 83655672 + MGP_BALBcJ_P0037671 Ccnh protein_coding protein_coding MGP_BALBcJ_T0037672.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83626825 83655964 + MGP_BALBcJ_P0037672 Ccnh protein_coding protein_coding MGP_BALBcJ_T0037673.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83645648 83666532 + MGP_BALBcJ_P0037673 Ccnh protein_coding protein_coding MGP_BALBcJ_T0037674.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83654382 83656163 + Ccnh protein_coding processed_transcript MGP_BALBcJ_T0037675.1 MGP_BALBcJ_G0020745.1 mouse_genomes_project 13 83654844 83655959 + Ccnh protein_coding retained_intron MGP_BALBcJ_T0036575.1 MGP_BALBcJ_G0020348.1 mouse_genomes_project 13 24598738 24604994 - MGP_BALBcJ_P0036575 Prl8a8 protein_coding protein_coding MGP_BALBcJ_T0036576.1 MGP_BALBcJ_G0020348.1 mouse_genomes_project 13 24598842 24604992 - MGP_BALBcJ_P0036576 Prl8a8 protein_coding protein_coding MGP_BALBcJ_T0037915.1 MGP_BALBcJ_G0020827.1 mouse_genomes_project 13 97954758 98025150 + MGP_BALBcJ_P0037915 Mrps27 protein_coding protein_coding MGP_BALBcJ_T0037809.1 MGP_BALBcJ_G0020787.1 mouse_genomes_project 13 93485491 93523898 + MGP_BALBcJ_P0037809 Wdr41 protein_coding protein_coding MGP_BALBcJ_T0037810.1 MGP_BALBcJ_G0020787.1 mouse_genomes_project 13 93485495 93532680 + MGP_BALBcJ_P0037810 Wdr41 protein_coding protein_coding MGP_BALBcJ_T0037811.1 MGP_BALBcJ_G0020787.1 mouse_genomes_project 13 93485495 93532681 + MGP_BALBcJ_P0037811 Wdr41 protein_coding protein_coding MGP_BALBcJ_T0037812.1 MGP_BALBcJ_G0020787.1 mouse_genomes_project 13 93485585 93523844 + MGP_BALBcJ_P0037812 Wdr41 protein_coding protein_coding MGP_BALBcJ_T0037813.1 MGP_BALBcJ_G0020787.1 mouse_genomes_project 13 93485585 93523844 + MGP_BALBcJ_P0037813 Wdr41 protein_coding protein_coding MGP_BALBcJ_T0037814.1 MGP_BALBcJ_G0020787.1 mouse_genomes_project 13 93485686 93531192 + MGP_BALBcJ_P0037814 Wdr41 protein_coding protein_coding MGP_BALBcJ_T0037459.1 MGP_BALBcJ_G0020668.1 mouse_genomes_project 13 65702346 65712744 - MGP_BALBcJ_P0037459 Zfp87 protein_coding protein_coding MGP_BALBcJ_T0037460.1 MGP_BALBcJ_G0020668.1 mouse_genomes_project 13 65704142 65712688 - MGP_BALBcJ_P0037460 Zfp87 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037461.1 MGP_BALBcJ_G0020668.1 mouse_genomes_project 13 65704547 65712713 - MGP_BALBcJ_P0037461 Zfp87 protein_coding protein_coding MGP_BALBcJ_T0037462.1 MGP_BALBcJ_G0020668.1 mouse_genomes_project 13 65707610 65712744 - MGP_BALBcJ_P0037462 Zfp87 protein_coding protein_coding MGP_BALBcJ_T0038122.1 MGP_BALBcJ_G0020883.1 mouse_genomes_project 13 110353922 110379725 + MGP_BALBcJ_P0038122 Mier3 protein_coding protein_coding MGP_BALBcJ_T0038123.1 MGP_BALBcJ_G0020883.1 mouse_genomes_project 13 110354020 110378766 + MGP_BALBcJ_P0038123 Mier3 protein_coding protein_coding MGP_BALBcJ_T0038124.1 MGP_BALBcJ_G0020883.1 mouse_genomes_project 13 110354069 110359532 + Mier3 protein_coding retained_intron MGP_BALBcJ_T0038125.1 MGP_BALBcJ_G0020883.1 mouse_genomes_project 13 110354070 110379722 + MGP_BALBcJ_P0038125 Mier3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038126.1 MGP_BALBcJ_G0020883.1 mouse_genomes_project 13 110354507 110376273 + MGP_BALBcJ_P0038126 Mier3 protein_coding protein_coding MGP_BALBcJ_T0036246.1 MGP_BALBcJ_G0020176.1 mouse_genomes_project 13 9780249 9795795 - MGP_BALBcJ_P0036246 protein_coding protein_coding MGP_BALBcJ_T0036247.1 MGP_BALBcJ_G0020176.1 mouse_genomes_project 13 9780249 9795794 - MGP_BALBcJ_P0036247 protein_coding protein_coding MGP_BALBcJ_T0036249.1 MGP_BALBcJ_G0020176.1 mouse_genomes_project 13 9781273 9795771 - MGP_BALBcJ_P0036249 protein_coding protein_coding MGP_BALBcJ_T0037572.1 MGP_BALBcJ_G0020720.1 mouse_genomes_project 13 73044576 73095888 + MGP_BALBcJ_P0037572 Erap1 protein_coding protein_coding MGP_BALBcJ_T0037393.1 MGP_BALBcJ_G0020631.1 mouse_genomes_project 13 62547387 62554422 + MGP_BALBcJ_P0037393 Cdk20 protein_coding protein_coding MGP_BALBcJ_T0006505.1 MGP_BALBcJ_G0005399.1 mouse_genomes_project 13 26250112 26251390 + A330102I10Rik lincRNA lincRNA MGP_BALBcJ_T0006506.1 MGP_BALBcJ_G0005399.1 mouse_genomes_project 13 26250185 26264436 + A330102I10Rik lincRNA lincRNA MGP_BALBcJ_T0006507.1 MGP_BALBcJ_G0005399.1 mouse_genomes_project 13 26252017 26264504 + A330102I10Rik lincRNA lincRNA MGP_BALBcJ_T0006508.1 MGP_BALBcJ_G0005399.1 mouse_genomes_project 13 26252432 26275540 + A330102I10Rik lincRNA lincRNA MGP_BALBcJ_T0037905.1 MGP_BALBcJ_G0020822.1 mouse_genomes_project 13 97339033 97431417 - MGP_BALBcJ_P0037905 Fcho2 protein_coding protein_coding MGP_BALBcJ_T0037906.1 MGP_BALBcJ_G0020822.1 mouse_genomes_project 13 97339033 97431417 - MGP_BALBcJ_P0037906 Fcho2 protein_coding protein_coding MGP_BALBcJ_T0037907.1 MGP_BALBcJ_G0020822.1 mouse_genomes_project 13 97367085 97431417 - MGP_BALBcJ_P0037907 Fcho2 protein_coding protein_coding MGP_BALBcJ_T0037908.1 MGP_BALBcJ_G0020822.1 mouse_genomes_project 13 97369039 97431417 - MGP_BALBcJ_P0037908 Fcho2 protein_coding protein_coding MGP_BALBcJ_T0037041.1 MGP_BALBcJ_G0020524.1 mouse_genomes_project 13 52249375 52269929 - MGP_BALBcJ_P0037041 Cltb protein_coding protein_coding MGP_BALBcJ_T0037042.1 MGP_BALBcJ_G0020524.1 mouse_genomes_project 13 52250512 52256136 - MGP_BALBcJ_P0037042 Cltb protein_coding protein_coding MGP_BALBcJ_T0037043.1 MGP_BALBcJ_G0020524.1 mouse_genomes_project 13 52250559 52269877 - MGP_BALBcJ_P0037043 Cltb protein_coding protein_coding MGP_BALBcJ_T0037044.1 MGP_BALBcJ_G0020524.1 mouse_genomes_project 13 52253014 52269877 - Cltb protein_coding retained_intron MGP_BALBcJ_T0036695.1 MGP_BALBcJ_G0020404.1 mouse_genomes_project 13 32130898 32140944 - MGP_BALBcJ_P0036695 Fam217a protein_coding protein_coding MGP_BALBcJ_T0012872.1 MGP_BALBcJ_G0010969.1 mouse_genomes_project 13 21370686 21371133 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012921.1 MGP_BALBcJ_G0011018.1 mouse_genomes_project 13 75118192 75119485 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000877.1 MGP_BALBcJ_G0000808.1 mouse_genomes_project 13 65631262 65633096 + TEC TEC MGP_BALBcJ_T0003448.1 MGP_BALBcJ_G0003158.1 mouse_genomes_project 13 65513970 65520313 + Gm17039 antisense antisense MGP_BALBcJ_T0102187.1 MGP_BALBcJ_G0040003.1 mouse_genomes_project 13 19101586 19102351 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037942.1 MGP_BALBcJ_G0020835.1 mouse_genomes_project 13 99070451 99114184 - MGP_BALBcJ_P0037942 protein_coding protein_coding MGP_BALBcJ_T0100657.1 MGP_BALBcJ_G0038693.1 mouse_genomes_project 13 76085302 76085433 + Gm26088 snoRNA snoRNA MGP_BALBcJ_T0012913.1 MGP_BALBcJ_G0011010.1 mouse_genomes_project 13 67143252 67144006 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012946.1 MGP_BALBcJ_G0011043.1 mouse_genomes_project 13 118509185 118510936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038074.1 MGP_BALBcJ_G0020873.1 mouse_genomes_project 13 106717950 106826199 - MGP_BALBcJ_P0038074 Ndufaf2 protein_coding protein_coding MGP_BALBcJ_T0012943.1 MGP_BALBcJ_G0011040.1 mouse_genomes_project 13 111557161 111558118 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037186.1 MGP_BALBcJ_G0020562.1 mouse_genomes_project 13 53519459 53526196 - MGP_BALBcJ_P0037186 Pitx1 protein_coding protein_coding MGP_BALBcJ_T0037187.1 MGP_BALBcJ_G0020562.1 mouse_genomes_project 13 53522883 53530964 - MGP_BALBcJ_P0037187 Pitx1 protein_coding protein_coding MGP_BALBcJ_T0012919.1 MGP_BALBcJ_G0011016.1 mouse_genomes_project 13 72662648 72662987 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102221.1 MGP_BALBcJ_G0040037.1 mouse_genomes_project 13 30778610 30796765 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036252.1 MGP_BALBcJ_G0020180.1 mouse_genomes_project 13 10477066 10662775 + MGP_BALBcJ_P0036252 Lyst protein_coding protein_coding MGP_BALBcJ_T0037774.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91772032 91854940 + MGP_BALBcJ_P0037774 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037775.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91772377 91834987 + MGP_BALBcJ_P0037775 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037776.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91772770 91828315 + MGP_BALBcJ_P0037776 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037777.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773074 91872381 + MGP_BALBcJ_P0037777 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037778.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773378 91870970 + MGP_BALBcJ_P0037778 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037779.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773378 91870970 + MGP_BALBcJ_P0037779 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037780.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773434 91872490 + MGP_BALBcJ_P0037780 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037781.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773459 91834259 + MGP_BALBcJ_P0037781 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037782.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773553 91871006 + MGP_BALBcJ_P0037782 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037783.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91773553 91871006 + MGP_BALBcJ_P0037783 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037784.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91776311 91872829 + MGP_BALBcJ_P0037784 Homer1 protein_coding protein_coding MGP_BALBcJ_T0037785.1 MGP_BALBcJ_G0020774.1 mouse_genomes_project 13 91851579 91870929 + MGP_BALBcJ_P0037785 Homer1 protein_coding unknown_likely_coding MGP_BALBcJ_T0037497.1 MGP_BALBcJ_G0020689.1 mouse_genomes_project 13 68916038 68965885 - MGP_BALBcJ_P0037497 Ice1 protein_coding protein_coding MGP_BALBcJ_T0006539.1 MGP_BALBcJ_G0005422.1 mouse_genomes_project 13 41782131 41838170 - Gm27007 lincRNA lincRNA MGP_BALBcJ_T0037406.1 MGP_BALBcJ_G0020641.1 mouse_genomes_project 13 63338292 63339570 + MGP_BALBcJ_P0037406 Gm10775 protein_coding protein_coding MGP_BALBcJ_T0100642.1 MGP_BALBcJ_G0038678.1 mouse_genomes_project 13 44392422 44392551 + Gm24769 snoRNA snoRNA MGP_BALBcJ_T0037200.1 MGP_BALBcJ_G0020568.1 mouse_genomes_project 13 54140741 54176992 + MGP_BALBcJ_P0037200 Slc25a48 protein_coding protein_coding MGP_BALBcJ_T0036362.1 MGP_BALBcJ_G0020222.1 mouse_genomes_project 13 18390275 18391102 - MGP_BALBcJ_P0036362 Gm10065 protein_coding protein_coding MGP_BALBcJ_T0003429.1 MGP_BALBcJ_G0003146.1 mouse_genomes_project 13 39204921 39211794 + Gm28564 antisense antisense MGP_BALBcJ_T0036729.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35043875 35161608 + MGP_BALBcJ_P0036729 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036730.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35093348 35161585 + MGP_BALBcJ_P0036730 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036731.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35093412 35203569 + MGP_BALBcJ_P0036731 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036732.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35093688 35220274 + MGP_BALBcJ_P0036732 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036733.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35094305 35215298 + MGP_BALBcJ_P0036733 Rreb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036734.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35094305 35200723 + MGP_BALBcJ_P0036734 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036735.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35094766 35200725 + MGP_BALBcJ_P0036735 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036736.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35125362 35161673 + MGP_BALBcJ_P0036736 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036737.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35156192 35220276 + MGP_BALBcJ_P0036737 Rreb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036738.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35156629 35220268 + MGP_BALBcJ_P0036738 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0036739.1 MGP_BALBcJ_G0020416.1 mouse_genomes_project 13 35215289 35217480 + MGP_BALBcJ_P0036739 Rreb1 protein_coding protein_coding MGP_BALBcJ_T0037698.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88126855 88214960 - MGP_BALBcJ_P0037698 Vcan protein_coding protein_coding MGP_BALBcJ_T0037699.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88127882 88214773 - MGP_BALBcJ_P0037699 Vcan protein_coding protein_coding MGP_BALBcJ_T0037700.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88128187 88214785 - MGP_BALBcJ_P0037700 Vcan protein_coding protein_coding MGP_BALBcJ_T0037701.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88128559 88149739 - MGP_BALBcJ_P0037701 Vcan protein_coding protein_coding MGP_BALBcJ_T0037702.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88128598 88214695 - MGP_BALBcJ_P0037702 Vcan protein_coding protein_coding MGP_BALBcJ_T0037703.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88129197 88150525 - MGP_BALBcJ_P0037703 Vcan protein_coding protein_coding MGP_BALBcJ_T0037704.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88182381 88194390 - Vcan protein_coding retained_intron MGP_BALBcJ_T0037705.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88182919 88214769 - MGP_BALBcJ_P0037705 Vcan protein_coding protein_coding MGP_BALBcJ_T0037706.1 MGP_BALBcJ_G0020750.1 mouse_genomes_project 13 88197860 88212817 - MGP_BALBcJ_P0037706 Vcan protein_coding protein_coding MGP_BALBcJ_T0100646.1 MGP_BALBcJ_G0038682.1 mouse_genomes_project 13 49255805 49255941 + Gm22806 snoRNA snoRNA MGP_BALBcJ_T0036648.1 MGP_BALBcJ_G0020386.1 mouse_genomes_project 13 30432284 30599859 + MGP_BALBcJ_P0036648 protein_coding protein_coding MGP_BALBcJ_T0009924.1 MGP_BALBcJ_G0008049.1 mouse_genomes_project 13 60861124 60861207 + Gm24588 miRNA miRNA MGP_BALBcJ_T0012914.1 MGP_BALBcJ_G0011011.1 mouse_genomes_project 13 67646248 67647244 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000888.1 MGP_BALBcJ_G0000819.1 mouse_genomes_project 13 97111919 97112494 - TEC TEC MGP_BALBcJ_T0037133.1 MGP_BALBcJ_G0020542.1 mouse_genomes_project 13 53021878 53041131 - MGP_BALBcJ_P0037133 Lman2 protein_coding protein_coding MGP_BALBcJ_T0006532.1 MGP_BALBcJ_G0005416.1 mouse_genomes_project 13 34772440 34775636 + Gm29590 lincRNA lincRNA MGP_BALBcJ_T0017330.1 MGP_BALBcJ_G0015200.1 mouse_genomes_project 13 118208284 118211242 - Gm9752 processed_transcript processed_transcript MGP_BALBcJ_T0037199.1 MGP_BALBcJ_G0020567.1 mouse_genomes_project 13 54063101 54065840 + MGP_BALBcJ_P0037199 Gm10782 protein_coding protein_coding MGP_BALBcJ_T0011336.1 MGP_BALBcJ_G0009461.1 mouse_genomes_project 13 54415880 54416050 + Gm27271 misc_RNA misc_RNA MGP_BALBcJ_T0038116.1 MGP_BALBcJ_G0020882.1 mouse_genomes_project 13 110089138 110156968 - MGP_BALBcJ_P0038116 Gpbp1 protein_coding protein_coding MGP_BALBcJ_T0038117.1 MGP_BALBcJ_G0020882.1 mouse_genomes_project 13 110089390 110156885 - MGP_BALBcJ_P0038117 Gpbp1 protein_coding protein_coding MGP_BALBcJ_T0038118.1 MGP_BALBcJ_G0020882.1 mouse_genomes_project 13 110089616 110154569 - MGP_BALBcJ_P0038118 Gpbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038119.1 MGP_BALBcJ_G0020882.1 mouse_genomes_project 13 110102513 110117866 - Gpbp1 protein_coding processed_transcript MGP_BALBcJ_T0038120.1 MGP_BALBcJ_G0020882.1 mouse_genomes_project 13 110105114 110117825 - Gpbp1 protein_coding processed_transcript MGP_BALBcJ_T0038121.1 MGP_BALBcJ_G0020882.1 mouse_genomes_project 13 110105184 110117866 - Gpbp1 protein_coding retained_intron MGP_BALBcJ_T0100633.1 MGP_BALBcJ_G0038669.1 mouse_genomes_project 13 19860274 19860405 - Gm23774 snoRNA snoRNA MGP_BALBcJ_T0038047.1 MGP_BALBcJ_G0020862.1 mouse_genomes_project 13 103509767 103530966 - MGP_BALBcJ_P0038047 Fam159b protein_coding protein_coding MGP_BALBcJ_T0036380.1 MGP_BALBcJ_G0020234.1 mouse_genomes_project 13 18609612 18610577 + MGP_BALBcJ_P0036380 Olfr1359 protein_coding protein_coding MGP_BALBcJ_T0037794.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92538582 92687724 + MGP_BALBcJ_P0037794 Lhfpl2 protein_coding protein_coding MGP_BALBcJ_T0037795.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92538618 92604426 + Lhfpl2 protein_coding retained_intron MGP_BALBcJ_T0037796.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92563918 92666983 + MGP_BALBcJ_P0037796 Lhfpl2 protein_coding protein_coding MGP_BALBcJ_T0037797.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92615207 92666669 + MGP_BALBcJ_P0037797 Lhfpl2 protein_coding protein_coding MGP_BALBcJ_T0037798.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92665157 92686832 + MGP_BALBcJ_P0037798 Lhfpl2 protein_coding protein_coding MGP_BALBcJ_T0037799.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92666121 92666556 + Lhfpl2 protein_coding processed_transcript MGP_BALBcJ_T0037800.1 MGP_BALBcJ_G0020781.1 mouse_genomes_project 13 92666334 92687724 + MGP_BALBcJ_P0037800 Lhfpl2 protein_coding protein_coding MGP_BALBcJ_T0012880.1 MGP_BALBcJ_G0010977.1 mouse_genomes_project 13 23836654 23837076 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038183.1 MGP_BALBcJ_G0020908.1 mouse_genomes_project 13 113520934 113622038 - MGP_BALBcJ_P0038183 Itga2 protein_coding protein_coding MGP_BALBcJ_T0037885.1 MGP_BALBcJ_G0020811.1 mouse_genomes_project 13 95788221 95800146 + MGP_BALBcJ_P0037885 Enc1 protein_coding protein_coding MGP_BALBcJ_T0011327.1 MGP_BALBcJ_G0009452.1 mouse_genomes_project 13 31505044 31505332 - Gm24530 misc_RNA misc_RNA MGP_BALBcJ_T0036881.1 MGP_BALBcJ_G0020472.1 mouse_genomes_project 13 45714290 45716900 + MGP_BALBcJ_P0036881 Id4 protein_coding protein_coding MGP_BALBcJ_T0006548.1 MGP_BALBcJ_G0005428.1 mouse_genomes_project 13 45991359 45993659 - 6720427I07Rik lincRNA lincRNA MGP_BALBcJ_T0037790.1 MGP_BALBcJ_G0020778.1 mouse_genomes_project 13 92120712 92138610 - MGP_BALBcJ_P0037790 Bhmt2 protein_coding protein_coding MGP_BALBcJ_T0037762.1 MGP_BALBcJ_G0020766.1 mouse_genomes_project 13 90927108 90961576 - MGP_BALBcJ_P0037762 Fam151b protein_coding protein_coding MGP_BALBcJ_T0102228.1 MGP_BALBcJ_G0040044.1 mouse_genomes_project 13 31014212 31016759 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011335.1 MGP_BALBcJ_G0009460.1 mouse_genomes_project 13 54415731 54415856 + Gm27834 misc_RNA misc_RNA MGP_BALBcJ_T0100632.1 MGP_BALBcJ_G0038668.1 mouse_genomes_project 13 15790040 15790174 + Gm26172 snoRNA snoRNA MGP_BALBcJ_T0037503.1 MGP_BALBcJ_G0020692.1 mouse_genomes_project 13 70272280 70278067 - MGP_BALBcJ_P0037503 Irx1 protein_coding protein_coding MGP_BALBcJ_T0037313.1 MGP_BALBcJ_G0020598.1 mouse_genomes_project 13 57970275 57971277 + MGP_BALBcJ_P0037313 Gm5084 protein_coding protein_coding MGP_BALBcJ_T0036564.1 MGP_BALBcJ_G0020342.1 mouse_genomes_project 13 24331642 24340688 + MGP_BALBcJ_P0036564 Prl3b1 protein_coding protein_coding MGP_BALBcJ_T0036572.1 MGP_BALBcJ_G0020347.1 mouse_genomes_project 13 24522929 24529551 - MGP_BALBcJ_P0036572 Prl8a6 protein_coding protein_coding MGP_BALBcJ_T0036573.1 MGP_BALBcJ_G0020347.1 mouse_genomes_project 13 24522929 24529511 - MGP_BALBcJ_P0036573 Prl8a6 protein_coding protein_coding MGP_BALBcJ_T0036574.1 MGP_BALBcJ_G0020347.1 mouse_genomes_project 13 24523116 24529460 - MGP_BALBcJ_P0036574 Prl8a6 protein_coding protein_coding MGP_BALBcJ_T0012885.1 MGP_BALBcJ_G0010982.1 mouse_genomes_project 13 26064208 26065132 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037914.1 MGP_BALBcJ_G0020826.1 mouse_genomes_project 13 97930087 97954650 - MGP_BALBcJ_P0037914 Ptcd2 protein_coding protein_coding MGP_BALBcJ_T0037332.1 MGP_BALBcJ_G0020614.1 mouse_genomes_project 13 59349677 59355168 - MGP_BALBcJ_P0037332 Cts3 protein_coding protein_coding MGP_BALBcJ_T0036640.1 MGP_BALBcJ_G0020381.1 mouse_genomes_project 13 30238959 30253916 + MGP_BALBcJ_P0036640 Serpinb9 protein_coding protein_coding MGP_BALBcJ_T0036641.1 MGP_BALBcJ_G0020381.1 mouse_genomes_project 13 30240255 30253914 + MGP_BALBcJ_P0036641 Serpinb9 protein_coding protein_coding MGP_BALBcJ_T0036425.1 MGP_BALBcJ_G0020267.1 mouse_genomes_project 13 19449407 19450316 - MGP_BALBcJ_P0036425 Vmn1r202 protein_coding protein_coding MGP_BALBcJ_T0036250.1 MGP_BALBcJ_G0020178.1 mouse_genomes_project 13 10042250 10042511 - MGP_BALBcJ_P0036250 Gm11360 protein_coding protein_coding MGP_BALBcJ_T0000883.1 MGP_BALBcJ_G0000814.1 mouse_genomes_project 13 88625093 88625912 + TEC TEC MGP_BALBcJ_T0036283.1 MGP_BALBcJ_G0020189.1 mouse_genomes_project 13 11480201 11493181 + MGP_BALBcJ_P0036283 Psma2 protein_coding protein_coding MGP_BALBcJ_T0036130.1 MGP_BALBcJ_G0020143.1 mouse_genomes_project 13 768551 774536 + MGP_BALBcJ_P0036130 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036131.1 MGP_BALBcJ_G0020143.1 mouse_genomes_project 13 768554 787786 + MGP_BALBcJ_P0036131 protein_coding protein_coding MGP_BALBcJ_T0036132.1 MGP_BALBcJ_G0020143.1 mouse_genomes_project 13 770200 787573 + MGP_BALBcJ_P0036132 protein_coding unknown_likely_coding MGP_BALBcJ_T0036911.1 MGP_BALBcJ_G0020482.1 mouse_genomes_project 13 46698341 46716044 - MGP_BALBcJ_P0036911 Susd3 protein_coding protein_coding MGP_BALBcJ_T0036912.1 MGP_BALBcJ_G0020482.1 mouse_genomes_project 13 46698480 46716456 - MGP_BALBcJ_P0036912 Susd3 protein_coding protein_coding MGP_BALBcJ_T0036913.1 MGP_BALBcJ_G0020482.1 mouse_genomes_project 13 46698954 46716413 - MGP_BALBcJ_P0036913 Susd3 protein_coding protein_coding MGP_BALBcJ_T0036914.1 MGP_BALBcJ_G0020482.1 mouse_genomes_project 13 46705435 46708369 - Susd3 protein_coding processed_transcript MGP_BALBcJ_T0036915.1 MGP_BALBcJ_G0020482.1 mouse_genomes_project 13 46705737 46715904 - MGP_BALBcJ_P0036915 Susd3 protein_coding protein_coding MGP_BALBcJ_T0036916.1 MGP_BALBcJ_G0020482.1 mouse_genomes_project 13 46706654 46710651 - Susd3 protein_coding processed_transcript MGP_BALBcJ_T0036565.1 MGP_BALBcJ_G0020343.1 mouse_genomes_project 13 24350423 24361610 + MGP_BALBcJ_P0036565 Prl3a1 protein_coding protein_coding MGP_BALBcJ_T0036489.1 MGP_BALBcJ_G0020318.1 mouse_genomes_project 13 20918374 20925414 + MGP_BALBcJ_P0036489 Slc17a1 protein_coding protein_coding MGP_BALBcJ_T0036490.1 MGP_BALBcJ_G0020318.1 mouse_genomes_project 13 20918631 20943228 + MGP_BALBcJ_P0036490 Slc17a1 protein_coding protein_coding MGP_BALBcJ_T0036491.1 MGP_BALBcJ_G0020318.1 mouse_genomes_project 13 20920919 20927227 + Slc17a1 protein_coding processed_transcript MGP_BALBcJ_T0036470.1 MGP_BALBcJ_G0020304.1 mouse_genomes_project 13 20735285 20736011 + MGP_BALBcJ_P0036470 Hist1h1t protein_coding protein_coding MGP_BALBcJ_T0037411.1 MGP_BALBcJ_G0020643.1 mouse_genomes_project 13 65046008 65051945 - MGP_BALBcJ_P0037411 Uqcrb protein_coding protein_coding MGP_BALBcJ_T0037412.1 MGP_BALBcJ_G0020643.1 mouse_genomes_project 13 65047602 65049336 - Uqcrb protein_coding processed_transcript MGP_BALBcJ_T0037238.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56128835 56148994 - MGP_BALBcJ_P0037238 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037239.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56128932 56148115 - MGP_BALBcJ_P0037239 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037240.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56128932 56148153 - MGP_BALBcJ_P0037240 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037241.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56128932 56143393 - MGP_BALBcJ_P0037241 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037242.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56129030 56148300 - MGP_BALBcJ_P0037242 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037243.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56137723 56142356 - MGP_BALBcJ_P0037243 Hnrnpk protein_coding unknown_likely_coding MGP_BALBcJ_T0037244.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56139685 56147793 - MGP_BALBcJ_P0037244 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037245.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56139877 56141058 - Hnrnpk protein_coding retained_intron MGP_BALBcJ_T0037246.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56139940 56142403 - Hnrnpk protein_coding retained_intron MGP_BALBcJ_T0037247.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56139998 56147754 - MGP_BALBcJ_P0037247 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037248.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56140027 56142284 - Hnrnpk protein_coding retained_intron MGP_BALBcJ_T0037249.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56140502 56148138 - MGP_BALBcJ_P0037249 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037250.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56140532 56148158 - MGP_BALBcJ_P0037250 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037251.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56140602 56143355 - Hnrnpk protein_coding retained_intron MGP_BALBcJ_T0037252.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56140607 56143355 - MGP_BALBcJ_P0037252 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037253.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56141226 56147761 - Hnrnpk protein_coding retained_intron MGP_BALBcJ_T0037254.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56142374 56147767 - MGP_BALBcJ_P0037254 Hnrnpk protein_coding protein_coding MGP_BALBcJ_T0037255.1 MGP_BALBcJ_G0020583.1 mouse_genomes_project 13 56144063 56148153 - Hnrnpk protein_coding retained_intron MGP_BALBcJ_T0036559.1 MGP_BALBcJ_G0020340.1 mouse_genomes_project 13 24208724 24215487 + MGP_BALBcJ_P0036559 Prl3d3 protein_coding protein_coding MGP_BALBcJ_T0036925.1 MGP_BALBcJ_G0020487.1 mouse_genomes_project 13 46978171 47004321 + MGP_BALBcJ_P0036925 Ecm2 protein_coding protein_coding MGP_BALBcJ_T0037312.1 MGP_BALBcJ_G0020597.1 mouse_genomes_project 13 57937190 57940154 - MGP_BALBcJ_P0037312 Gas1 protein_coding protein_coding MGP_BALBcJ_T0036340.1 MGP_BALBcJ_G0020214.1 mouse_genomes_project 13 18188429 18194732 - MGP_BALBcJ_P0036340 Gpx5 protein_coding protein_coding MGP_BALBcJ_T0036341.1 MGP_BALBcJ_G0020214.1 mouse_genomes_project 13 18188429 18194687 - MGP_BALBcJ_P0036341 Gpx5 protein_coding protein_coding MGP_BALBcJ_T0002578.1 MGP_BALBcJ_G0002479.1 mouse_genomes_project 13 16035538 16036006 + MGP_BALBcJ_P0002578 Tcrg-V7 TR_V_gene TR_V_gene MGP_BALBcJ_T0100662.1 MGP_BALBcJ_G0038698.1 mouse_genomes_project 13 90219281 90219409 + Gm22778 snoRNA snoRNA MGP_BALBcJ_T0037202.1 MGP_BALBcJ_G0020570.1 mouse_genomes_project 13 54223290 54228280 + MGP_BALBcJ_P0037202 Fbxl21 protein_coding protein_coding MGP_BALBcJ_T0037203.1 MGP_BALBcJ_G0020570.1 mouse_genomes_project 13 54223309 54238714 + MGP_BALBcJ_P0037203 Fbxl21 protein_coding protein_coding MGP_BALBcJ_T0037204.1 MGP_BALBcJ_G0020570.1 mouse_genomes_project 13 54223326 54238602 + MGP_BALBcJ_P0037204 Fbxl21 protein_coding protein_coding MGP_BALBcJ_T0037205.1 MGP_BALBcJ_G0020570.1 mouse_genomes_project 13 54223331 54230909 + MGP_BALBcJ_P0037205 Fbxl21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037483.1 MGP_BALBcJ_G0020683.1 mouse_genomes_project 13 66953582 67329439 - MGP_BALBcJ_P0037483 Adcy2 protein_coding protein_coding MGP_BALBcJ_T0037207.1 MGP_BALBcJ_G0020572.1 mouse_genomes_project 13 54317953 54348016 + MGP_BALBcJ_P0037207 Tgfbi protein_coding protein_coding MGP_BALBcJ_T0036397.1 MGP_BALBcJ_G0020248.1 mouse_genomes_project 13 18747445 20788497 - MGP_BALBcJ_P0036397 protein_coding protein_coding MGP_BALBcJ_T0037523.1 MGP_BALBcJ_G0020701.1 mouse_genomes_project 13 71939909 71962713 + MGP_BALBcJ_P0037523 Tert protein_coding protein_coding MGP_BALBcJ_T0006510.1 MGP_BALBcJ_G0005401.1 mouse_genomes_project 13 27839210 27848382 + 4930519D14Rik lincRNA lincRNA MGP_BALBcJ_T0036940.1 MGP_BALBcJ_G0020493.1 mouse_genomes_project 13 47372673 47378152 - MGP_BALBcJ_P0036940 Gm8674 protein_coding protein_coding MGP_BALBcJ_T0036890.1 MGP_BALBcJ_G0020475.1 mouse_genomes_project 13 46034215 46082047 - MGP_BALBcJ_P0036890 Ptpdc1 protein_coding protein_coding MGP_BALBcJ_T0012876.1 MGP_BALBcJ_G0010973.1 mouse_genomes_project 13 22646750 22647866 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036644.1 MGP_BALBcJ_G0020384.1 mouse_genomes_project 13 30387766 30401491 - MGP_BALBcJ_P0036644 Serpinb9c protein_coding protein_coding MGP_BALBcJ_T0036645.1 MGP_BALBcJ_G0020384.1 mouse_genomes_project 13 30388076 30400100 - MGP_BALBcJ_P0036645 Serpinb9c protein_coding protein_coding MGP_BALBcJ_T0036646.1 MGP_BALBcJ_G0020384.1 mouse_genomes_project 13 30398214 30400244 - MGP_BALBcJ_P0036646 Serpinb9c protein_coding protein_coding MGP_BALBcJ_T0003465.1 MGP_BALBcJ_G0003166.1 mouse_genomes_project 13 90193070 90231026 - 4833422C13Rik antisense antisense MGP_BALBcJ_T0003466.1 MGP_BALBcJ_G0003166.1 mouse_genomes_project 13 90199309 90230930 - 4833422C13Rik antisense antisense MGP_BALBcJ_T0003467.1 MGP_BALBcJ_G0003166.1 mouse_genomes_project 13 90208583 90230982 - 4833422C13Rik antisense antisense MGP_BALBcJ_T0012897.1 MGP_BALBcJ_G0010994.1 mouse_genomes_project 13 32162254 32163240 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009892.1 MGP_BALBcJ_G0008017.1 mouse_genomes_project 13 18291650 18291711 - Mir6942 miRNA miRNA MGP_BALBcJ_T0009905.1 MGP_BALBcJ_G0008030.1 mouse_genomes_project 13 28857004 28857102 - Gm27516 miRNA miRNA MGP_BALBcJ_T0036905.1 MGP_BALBcJ_G0020480.1 mouse_genomes_project 13 46654345 46663105 + MGP_BALBcJ_P0036905 Ninj1 protein_coding protein_coding MGP_BALBcJ_T0036906.1 MGP_BALBcJ_G0020480.1 mouse_genomes_project 13 46654385 46663105 + MGP_BALBcJ_P0036906 Ninj1 protein_coding protein_coding MGP_BALBcJ_T0036907.1 MGP_BALBcJ_G0020480.1 mouse_genomes_project 13 46654396 46662620 + MGP_BALBcJ_P0036907 Ninj1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036908.1 MGP_BALBcJ_G0020480.1 mouse_genomes_project 13 46654627 46661785 + Ninj1 protein_coding processed_transcript MGP_BALBcJ_T0036909.1 MGP_BALBcJ_G0020480.1 mouse_genomes_project 13 46657156 46663105 + Ninj1 protein_coding processed_transcript MGP_BALBcJ_T0102211.1 MGP_BALBcJ_G0040027.1 mouse_genomes_project 13 20205219 20205680 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0017303.1 MGP_BALBcJ_G0015183.1 mouse_genomes_project 13 18938623 18940183 + Gm11291 processed_transcript processed_transcript MGP_BALBcJ_T0037127.1 MGP_BALBcJ_G0020539.1 mouse_genomes_project 13 52995172 52997930 - MGP_BALBcJ_P0037127 Rab24 protein_coding protein_coding MGP_BALBcJ_T0036488.1 MGP_BALBcJ_G0020317.1 mouse_genomes_project 13 20893138 20908796 + MGP_BALBcJ_P0036488 Slc17a3 protein_coding protein_coding MGP_BALBcJ_T0037807.1 MGP_BALBcJ_G0020786.1 mouse_genomes_project 13 93383082 93392569 + MGP_BALBcJ_P0037807 Otp protein_coding protein_coding MGP_BALBcJ_T0037808.1 MGP_BALBcJ_G0020786.1 mouse_genomes_project 13 93390080 93391000 + Otp protein_coding processed_transcript MGP_BALBcJ_T0006607.1 MGP_BALBcJ_G0005466.1 mouse_genomes_project 13 97070819 97071681 - Gm29501 lincRNA lincRNA MGP_BALBcJ_T0006570.1 MGP_BALBcJ_G0005441.1 mouse_genomes_project 13 61376191 61383827 - Gm16907 lincRNA lincRNA MGP_BALBcJ_T0037588.1 MGP_BALBcJ_G0020730.1 mouse_genomes_project 13 74518440 74606624 + MGP_BALBcJ_P0037588 Ttc37 protein_coding unknown_likely_coding MGP_BALBcJ_T0100666.1 MGP_BALBcJ_G0038702.1 mouse_genomes_project 13 103892757 103892887 - Gm25631 snoRNA snoRNA MGP_BALBcJ_T0036861.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44437795 44456028 - MGP_BALBcJ_P0036861 Tpmt protein_coding protein_coding MGP_BALBcJ_T0036862.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44437804 44455942 - MGP_BALBcJ_P0036862 Tpmt protein_coding protein_coding MGP_BALBcJ_T0036863.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44437993 44457482 - MGP_BALBcJ_P0036863 Tpmt protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036864.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44441260 44456161 - MGP_BALBcJ_P0036864 Tpmt protein_coding protein_coding MGP_BALBcJ_T0036865.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44441279 44457555 - MGP_BALBcJ_P0036865 Tpmt protein_coding protein_coding MGP_BALBcJ_T0036866.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44452516 44455962 - Tpmt protein_coding retained_intron MGP_BALBcJ_T0036867.1 MGP_BALBcJ_G0020468.1 mouse_genomes_project 13 44452926 44455956 - MGP_BALBcJ_P0036867 Tpmt protein_coding protein_coding MGP_BALBcJ_T0099386.1 MGP_BALBcJ_G0037422.1 mouse_genomes_project 13 94419839 94419998 - Gm24032 snRNA snRNA MGP_BALBcJ_T0099356.1 MGP_BALBcJ_G0037392.1 mouse_genomes_project 13 10962368 10962475 + Gm26129 snRNA snRNA MGP_BALBcJ_T0037454.1 MGP_BALBcJ_G0020666.1 mouse_genomes_project 13 65676673 65687080 - MGP_BALBcJ_P0037454 Zfp58 protein_coding protein_coding MGP_BALBcJ_T0037455.1 MGP_BALBcJ_G0020666.1 mouse_genomes_project 13 65676674 65687132 - MGP_BALBcJ_P0037455 Zfp58 protein_coding protein_coding MGP_BALBcJ_T0037457.1 MGP_BALBcJ_G0020666.1 mouse_genomes_project 13 65678154 65687064 - MGP_BALBcJ_P0037457 Zfp58 protein_coding protein_coding MGP_BALBcJ_T0037458.1 MGP_BALBcJ_G0020666.1 mouse_genomes_project 13 65678369 65687021 - MGP_BALBcJ_P0037458 Zfp58 protein_coding protein_coding MGP_BALBcJ_T0037177.1 MGP_BALBcJ_G0020557.1 mouse_genomes_project 13 53322255 53371050 + MGP_BALBcJ_P0037177 Ddx46 protein_coding protein_coding MGP_BALBcJ_T0037178.1 MGP_BALBcJ_G0020557.1 mouse_genomes_project 13 53322255 53371050 + MGP_BALBcJ_P0037178 Ddx46 protein_coding protein_coding MGP_BALBcJ_T0037179.1 MGP_BALBcJ_G0020557.1 mouse_genomes_project 13 53350460 53371058 + MGP_BALBcJ_P0037179 Ddx46 protein_coding unknown_likely_coding MGP_BALBcJ_T0009907.1 MGP_BALBcJ_G0008032.1 mouse_genomes_project 13 38209838 38209910 + Mir5124a miRNA miRNA MGP_BALBcJ_T0003421.1 MGP_BALBcJ_G0003140.1 mouse_genomes_project 13 21972341 21980888 + 4932702P03Rik antisense antisense MGP_BALBcJ_T0003422.1 MGP_BALBcJ_G0003140.1 mouse_genomes_project 13 21972344 21974034 + 4932702P03Rik antisense antisense MGP_BALBcJ_T0036241.1 MGP_BALBcJ_G0020171.1 mouse_genomes_project 13 9042519 9092737 - MGP_BALBcJ_P0036241 Edaradd protein_coding protein_coding MGP_BALBcJ_T0009943.1 MGP_BALBcJ_G0008068.1 mouse_genomes_project 13 111712201 111712310 + Mir449c miRNA miRNA MGP_BALBcJ_T0037330.1 MGP_BALBcJ_G0020612.1 mouse_genomes_project 13 59111178 59117352 - MGP_BALBcJ_P0037330 Cts7 protein_coding protein_coding MGP_BALBcJ_T0037974.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99454179 99461944 - MGP_BALBcJ_P0037974 Ccnb1 protein_coding protein_coding MGP_BALBcJ_T0037975.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99454261 99461860 - MGP_BALBcJ_P0037975 Ccnb1 protein_coding protein_coding MGP_BALBcJ_T0037976.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99454276 99456827 - Ccnb1 protein_coding retained_intron MGP_BALBcJ_T0037977.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99455383 99457407 - Ccnb1 protein_coding retained_intron MGP_BALBcJ_T0037978.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99456137 99461776 - MGP_BALBcJ_P0037978 Ccnb1 protein_coding protein_coding MGP_BALBcJ_T0037979.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99458417 99460977 - Ccnb1 protein_coding retained_intron MGP_BALBcJ_T0037980.1 MGP_BALBcJ_G0020846.1 mouse_genomes_project 13 99460910 99461849 - Ccnb1 protein_coding retained_intron MGP_BALBcJ_T0006594.1 MGP_BALBcJ_G0005457.1 mouse_genomes_project 13 89853767 89873653 - A830009L08Rik lincRNA lincRNA MGP_BALBcJ_T0036924.1 MGP_BALBcJ_G0020486.1 mouse_genomes_project 13 46937668 47124012 - MGP_BALBcJ_P0036924 Cenpp protein_coding protein_coding MGP_BALBcJ_T0098322.1 MGP_BALBcJ_G0036376.1 mouse_genomes_project 13 88048251 88049509 - pseudogene pseudogene MGP_BALBcJ_T0102230.1 MGP_BALBcJ_G0040046.1 mouse_genomes_project 13 40247005 40247894 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002580.1 MGP_BALBcJ_G0002481.1 mouse_genomes_project 13 16047800 16048374 + MGP_BALBcJ_P0002580 Tcrg-V6 TR_V_gene TR_V_gene MGP_BALBcJ_T0002581.1 MGP_BALBcJ_G0002481.1 mouse_genomes_project 13 16047812 16048374 + MGP_BALBcJ_P0002581 Tcrg-V6 TR_V_gene TR_V_gene MGP_BALBcJ_T0037514.1 MGP_BALBcJ_G0020697.1 mouse_genomes_project 13 71639712 71640879 + MGP_BALBcJ_P0037514 Mrpl36 protein_coding protein_coding MGP_BALBcJ_T0012860.1 MGP_BALBcJ_G0010957.1 mouse_genomes_project 13 18878807 18880223 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017319.1 MGP_BALBcJ_G0015192.1 mouse_genomes_project 13 38304431 38348112 - A730081D07Rik processed_transcript processed_transcript MGP_BALBcJ_T0037067.1 MGP_BALBcJ_G0020527.1 mouse_genomes_project 13 52365270 52401604 + MGP_BALBcJ_P0037067 Cdhr2 protein_coding protein_coding MGP_BALBcJ_T0037068.1 MGP_BALBcJ_G0020527.1 mouse_genomes_project 13 52376446 52401600 + MGP_BALBcJ_P0037068 Cdhr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0036361.1 MGP_BALBcJ_G0020221.1 mouse_genomes_project 13 18378942 18380405 - MGP_BALBcJ_P0036361 Nkapl protein_coding protein_coding MGP_BALBcJ_T0036680.1 MGP_BALBcJ_G0020396.1 mouse_genomes_project 13 31275063 31311384 + MGP_BALBcJ_P0036680 Bphl protein_coding protein_coding MGP_BALBcJ_T0036893.1 MGP_BALBcJ_G0020478.1 mouse_genomes_project 13 46343746 46434505 - MGP_BALBcJ_P0036893 Fam120a protein_coding protein_coding MGP_BALBcJ_T0036482.1 MGP_BALBcJ_G0020314.1 mouse_genomes_project 13 20813341 20813983 + MGP_BALBcJ_P0036482 Hist1h1a protein_coding protein_coding MGP_BALBcJ_T0006494.1 MGP_BALBcJ_G0005390.1 mouse_genomes_project 13 20279961 20283745 + 4933404K08Rik lincRNA lincRNA MGP_BALBcJ_T0000881.1 MGP_BALBcJ_G0000812.1 mouse_genomes_project 13 82191000 82194827 - TEC TEC MGP_BALBcJ_T0037918.1 MGP_BALBcJ_G0020830.1 mouse_genomes_project 13 98553875 98630475 - MGP_BALBcJ_P0037918 Mccc2 protein_coding protein_coding MGP_BALBcJ_T0098493.1 MGP_BALBcJ_G0036547.1 mouse_genomes_project 13 10992938 10993051 - n-R5s52 rRNA rRNA MGP_BALBcJ_T0036421.1 MGP_BALBcJ_G0020263.1 mouse_genomes_project 13 19280959 19281862 + MGP_BALBcJ_P0036421 Vmn1r198 protein_coding protein_coding MGP_BALBcJ_T0100668.1 MGP_BALBcJ_G0038704.1 mouse_genomes_project 13 116812577 116812707 + Gm26349 snoRNA snoRNA MGP_BALBcJ_T0036371.1 MGP_BALBcJ_G0020228.1 mouse_genomes_project 13 18466382 18467326 - MGP_BALBcJ_P0036371 Olfr1535 protein_coding protein_coding MGP_BALBcJ_T0036286.1 MGP_BALBcJ_G0020191.1 mouse_genomes_project 13 12303268 12556740 + MGP_BALBcJ_P0036286 Gli3 protein_coding protein_coding MGP_BALBcJ_T0036287.1 MGP_BALBcJ_G0020191.1 mouse_genomes_project 13 12303284 12481692 + Gli3 protein_coding processed_transcript MGP_BALBcJ_T0036288.1 MGP_BALBcJ_G0020191.1 mouse_genomes_project 13 12303756 12505121 + Gli3 protein_coding retained_intron MGP_BALBcJ_T0036289.1 MGP_BALBcJ_G0020191.1 mouse_genomes_project 13 12304013 12571657 + MGP_BALBcJ_P0036289 Gli3 protein_coding protein_coding MGP_BALBcJ_T0036424.1 MGP_BALBcJ_G0020266.1 mouse_genomes_project 13 19421336 19422239 + MGP_BALBcJ_P0036424 Vmn1r201 protein_coding protein_coding MGP_BALBcJ_T0036984.1 MGP_BALBcJ_G0020507.1 mouse_genomes_project 13 50204939 50273032 + MGP_BALBcJ_P0036984 Syk protein_coding protein_coding MGP_BALBcJ_T0036985.1 MGP_BALBcJ_G0020507.1 mouse_genomes_project 13 50205203 50267863 + MGP_BALBcJ_P0036985 Syk protein_coding protein_coding MGP_BALBcJ_T0036986.1 MGP_BALBcJ_G0020507.1 mouse_genomes_project 13 50205269 50235650 + Syk protein_coding retained_intron MGP_BALBcJ_T0036987.1 MGP_BALBcJ_G0020507.1 mouse_genomes_project 13 50218895 50273022 + MGP_BALBcJ_P0036987 Syk protein_coding protein_coding MGP_BALBcJ_T0036988.1 MGP_BALBcJ_G0020507.1 mouse_genomes_project 13 50219001 50246617 + Syk protein_coding retained_intron MGP_BALBcJ_T0037868.1 MGP_BALBcJ_G0020806.1 mouse_genomes_project 13 95564675 95581228 - MGP_BALBcJ_P0037868 1700029F12Rik protein_coding protein_coding MGP_BALBcJ_T0100629.1 MGP_BALBcJ_G0038665.1 mouse_genomes_project 13 7993162 7993282 - Gm25496 snoRNA snoRNA MGP_BALBcJ_T0009908.1 MGP_BALBcJ_G0008033.1 mouse_genomes_project 13 45991848 45991951 - Mirlet7d miRNA miRNA MGP_BALBcJ_T0099376.1 MGP_BALBcJ_G0037412.1 mouse_genomes_project 13 42869787 42869894 - Gm23387 snRNA snRNA MGP_BALBcJ_T0036374.1 MGP_BALBcJ_G0020230.1 mouse_genomes_project 13 18525319 18526304 - MGP_BALBcJ_P0036374 Olfr1362 protein_coding protein_coding MGP_BALBcJ_T0102199.1 MGP_BALBcJ_G0040015.1 mouse_genomes_project 13 19825589 19826629 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012941.1 MGP_BALBcJ_G0011038.1 mouse_genomes_project 13 110027472 110027716 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036411.1 MGP_BALBcJ_G0020253.1 mouse_genomes_project 13 18960705 18961508 + MGP_BALBcJ_P0036411 protein_coding protein_coding MGP_BALBcJ_T0036722.1 MGP_BALBcJ_G0020411.1 mouse_genomes_project 13 33210388 33370872 - MGP_BALBcJ_P0036722 Lyrm4 protein_coding protein_coding MGP_BALBcJ_T0009910.1 MGP_BALBcJ_G0008035.1 mouse_genomes_project 13 45993665 45993754 - Mirlet7f-1 miRNA miRNA MGP_BALBcJ_T0036475.1 MGP_BALBcJ_G0020307.1 mouse_genomes_project 13 20780656 20782246 + MGP_BALBcJ_P0036475 Hist1h1c protein_coding protein_coding MGP_BALBcJ_T0009887.1 MGP_BALBcJ_G0008012.1 mouse_genomes_project 13 2592460 2592557 - Gm26259 miRNA miRNA MGP_BALBcJ_T0037480.1 MGP_BALBcJ_G0020681.1 mouse_genomes_project 13 66917390 66927452 + MGP_BALBcJ_P0037480 Fastkd3 protein_coding unknown_likely_coding MGP_BALBcJ_T0037481.1 MGP_BALBcJ_G0020681.1 mouse_genomes_project 13 66917393 66927444 + MGP_BALBcJ_P0037481 Fastkd3 protein_coding protein_coding MGP_BALBcJ_T0099391.1 MGP_BALBcJ_G0037427.1 mouse_genomes_project 13 110955559 110955712 + Gm22768 snRNA snRNA MGP_BALBcJ_T0037447.1 MGP_BALBcJ_G0020660.1 mouse_genomes_project 13 65500069 65532450 - MGP_BALBcJ_P0037447 Gm28041 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006592.1 MGP_BALBcJ_G0005455.1 mouse_genomes_project 13 82346808 82388488 + 2810049E08Rik lincRNA lincRNA MGP_BALBcJ_T0037730.1 MGP_BALBcJ_G0020758.1 mouse_genomes_project 13 90230665 90276682 + MGP_BALBcJ_P0037730 Acot12 protein_coding protein_coding MGP_BALBcJ_T0037731.1 MGP_BALBcJ_G0020758.1 mouse_genomes_project 13 90230686 90252506 + Acot12 protein_coding retained_intron MGP_BALBcJ_T0037732.1 MGP_BALBcJ_G0020758.1 mouse_genomes_project 13 90269859 90275438 + Acot12 protein_coding processed_transcript MGP_BALBcJ_T0036311.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16295818 16305907 - Stard3nl protein_coding retained_intron MGP_BALBcJ_T0036312.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16295821 16297269 - Stard3nl protein_coding retained_intron MGP_BALBcJ_T0036313.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16295821 16333918 - MGP_BALBcJ_P0036313 Stard3nl protein_coding protein_coding MGP_BALBcJ_T0036314.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16296144 16308312 - Stard3nl protein_coding retained_intron MGP_BALBcJ_T0036315.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16302906 16333905 - MGP_BALBcJ_P0036315 Stard3nl protein_coding protein_coding MGP_BALBcJ_T0036316.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16307350 16333966 - Stard3nl protein_coding retained_intron MGP_BALBcJ_T0036317.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16308267 16314602 - Stard3nl protein_coding retained_intron MGP_BALBcJ_T0036318.1 MGP_BALBcJ_G0020201.1 mouse_genomes_project 13 16314528 16333930 - MGP_BALBcJ_P0036318 Stard3nl protein_coding protein_coding MGP_BALBcJ_T0006520.1 MGP_BALBcJ_G0005409.1 mouse_genomes_project 13 28798300 28815315 - 1700018A04Rik lincRNA lincRNA MGP_BALBcJ_T0006521.1 MGP_BALBcJ_G0005409.1 mouse_genomes_project 13 28800206 28815323 - 1700018A04Rik lincRNA lincRNA MGP_BALBcJ_T0006522.1 MGP_BALBcJ_G0005409.1 mouse_genomes_project 13 28811096 28815323 - 1700018A04Rik lincRNA lincRNA MGP_BALBcJ_T0038021.1 MGP_BALBcJ_G0020853.1 mouse_genomes_project 13 102689110 102774896 - MGP_BALBcJ_P0038021 Nln protein_coding protein_coding MGP_BALBcJ_T0098319.1 MGP_BALBcJ_G0036373.1 mouse_genomes_project 13 10262088 10262495 - pseudogene pseudogene MGP_BALBcJ_T0036330.1 MGP_BALBcJ_G0020208.1 mouse_genomes_project 13 17705941 17926206 + MGP_BALBcJ_P0036330 Aoah protein_coding protein_coding MGP_BALBcJ_T0000891.1 MGP_BALBcJ_G0000822.1 mouse_genomes_project 13 100127421 100127905 - TEC TEC MGP_BALBcJ_T0037451.1 MGP_BALBcJ_G0020663.1 mouse_genomes_project 13 65573234 65595035 - MGP_BALBcJ_P0037451 Zfp459 protein_coding protein_coding MGP_BALBcJ_T0036616.1 MGP_BALBcJ_G0020367.1 mouse_genomes_project 13 28041952 28174779 - MGP_BALBcJ_P0036616 Exoc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0012850.1 MGP_BALBcJ_G0010947.1 mouse_genomes_project 13 13870360 13871318 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003431.1 MGP_BALBcJ_G0003148.1 mouse_genomes_project 13 40500777 40508760 - Gm15813 antisense antisense MGP_BALBcJ_T0100641.1 MGP_BALBcJ_G0038677.1 mouse_genomes_project 13 44175939 44176069 - Gm24620 snoRNA snoRNA MGP_BALBcJ_T0038168.1 MGP_BALBcJ_G0020902.1 mouse_genomes_project 13 112267816 112294212 - MGP_BALBcJ_P0038168 Snx18 protein_coding protein_coding MGP_BALBcJ_T0037201.1 MGP_BALBcJ_G0020569.1 mouse_genomes_project 13 54182011 54184985 - MGP_BALBcJ_P0037201 Il9 protein_coding protein_coding MGP_BALBcJ_T0036170.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5413574 5478585 - MGP_BALBcJ_P0036170 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036171.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5413601 5477899 - MGP_BALBcJ_P0036171 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036172.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5416419 5454440 - MGP_BALBcJ_P0036172 Wdr37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036173.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5426732 5456361 - MGP_BALBcJ_P0036173 Wdr37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036174.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5426790 5460510 - MGP_BALBcJ_P0036174 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036175.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5442258 5444104 - Wdr37 protein_coding retained_intron MGP_BALBcJ_T0036176.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5449633 5465563 - MGP_BALBcJ_P0036176 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036177.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5454482 5478591 - MGP_BALBcJ_P0036177 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036178.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5456345 5468026 - MGP_BALBcJ_P0036178 Wdr37 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036179.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5457282 5477878 - MGP_BALBcJ_P0036179 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036180.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5459471 5477834 - MGP_BALBcJ_P0036180 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036181.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5459474 5468023 - MGP_BALBcJ_P0036181 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036182.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5460127 5477849 - Wdr37 protein_coding processed_transcript MGP_BALBcJ_T0036183.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5460475 5465576 - Wdr37 protein_coding processed_transcript MGP_BALBcJ_T0036184.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5463720 5478764 - MGP_BALBcJ_P0036184 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036185.1 MGP_BALBcJ_G0020157.1 mouse_genomes_project 13 5467936 5477862 - MGP_BALBcJ_P0036185 Wdr37 protein_coding protein_coding MGP_BALBcJ_T0036468.1 MGP_BALBcJ_G0020302.1 mouse_genomes_project 13 20668930 20669753 - MGP_BALBcJ_P0036468 Hist1h1e protein_coding protein_coding MGP_BALBcJ_T0038012.1 MGP_BALBcJ_G0020851.1 mouse_genomes_project 13 102404040 102435851 - MGP_BALBcJ_P0038012 Srek1 protein_coding protein_coding MGP_BALBcJ_T0038013.1 MGP_BALBcJ_G0020851.1 mouse_genomes_project 13 102423415 102436147 - MGP_BALBcJ_P0038013 Srek1 protein_coding unknown_likely_coding MGP_BALBcJ_T0038185.1 MGP_BALBcJ_G0020910.1 mouse_genomes_project 13 113783361 113785444 - MGP_BALBcJ_P0038185 Pelo protein_coding protein_coding MGP_BALBcJ_T0012923.1 MGP_BALBcJ_G0011020.1 mouse_genomes_project 13 76761059 76763143 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037711.1 MGP_BALBcJ_G0020752.1 mouse_genomes_project 13 88556227 88579742 + MGP_BALBcJ_P0037711 Tmem167 protein_coding protein_coding MGP_BALBcJ_T0037712.1 MGP_BALBcJ_G0020752.1 mouse_genomes_project 13 88556838 88611724 + MGP_BALBcJ_P0037712 Tmem167 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037713.1 MGP_BALBcJ_G0020752.1 mouse_genomes_project 13 88556866 88572147 + MGP_BALBcJ_P0037713 Tmem167 protein_coding protein_coding MGP_BALBcJ_T0036543.1 MGP_BALBcJ_G0020332.1 mouse_genomes_project 13 22009664 22066475 + MGP_BALBcJ_P0036543 Gpld1 protein_coding protein_coding MGP_BALBcJ_T0036544.1 MGP_BALBcJ_G0020332.1 mouse_genomes_project 13 22022862 22038538 + Gpld1 protein_coding processed_transcript MGP_BALBcJ_T0036545.1 MGP_BALBcJ_G0020332.1 mouse_genomes_project 13 22055100 22066475 + MGP_BALBcJ_P0036545 Gpld1 protein_coding protein_coding MGP_BALBcJ_T0037903.1 MGP_BALBcJ_G0020821.1 mouse_genomes_project 13 97301263 97309870 - MGP_BALBcJ_P0037903 Tmem171 protein_coding protein_coding MGP_BALBcJ_T0037904.1 MGP_BALBcJ_G0020821.1 mouse_genomes_project 13 97307352 97309804 - MGP_BALBcJ_P0037904 Tmem171 protein_coding protein_coding MGP_BALBcJ_T0038147.1 MGP_BALBcJ_G0020890.1 mouse_genomes_project 13 111473596 111541177 + MGP_BALBcJ_P0038147 Plpp1 protein_coding protein_coding MGP_BALBcJ_T0038148.1 MGP_BALBcJ_G0020890.1 mouse_genomes_project 13 111473625 111540943 + MGP_BALBcJ_P0038148 Plpp1 protein_coding protein_coding MGP_BALBcJ_T0012892.1 MGP_BALBcJ_G0010989.1 mouse_genomes_project 13 28421237 28421808 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037053.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52341311 52350006 - MGP_BALBcJ_P0037053 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037054.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52341314 52355747 - MGP_BALBcJ_P0037054 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037055.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52341320 52355816 - MGP_BALBcJ_P0037055 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037056.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52341324 52350100 - MGP_BALBcJ_P0037056 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037057.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52344557 52345983 - Rnf44 protein_coding retained_intron MGP_BALBcJ_T0037058.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52344962 52355755 - MGP_BALBcJ_P0037058 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037059.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345038 52349566 - MGP_BALBcJ_P0037059 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037060.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345395 52346318 - Rnf44 protein_coding retained_intron MGP_BALBcJ_T0037061.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345520 52350112 - MGP_BALBcJ_P0037061 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037062.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345616 52350169 - MGP_BALBcJ_P0037062 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037063.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345874 52355721 - MGP_BALBcJ_P0037063 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0037064.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345940 52349164 - Rnf44 protein_coding processed_transcript MGP_BALBcJ_T0037065.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345951 52355759 - Rnf44 protein_coding processed_transcript MGP_BALBcJ_T0037066.1 MGP_BALBcJ_G0020526.1 mouse_genomes_project 13 52345960 52350185 - MGP_BALBcJ_P0037066 Rnf44 protein_coding protein_coding MGP_BALBcJ_T0036581.1 MGP_BALBcJ_G0020352.1 mouse_genomes_project 13 24725206 24734585 - MGP_BALBcJ_P0036581 Prl7a1 protein_coding protein_coding MGP_BALBcJ_T0036582.1 MGP_BALBcJ_G0020352.1 mouse_genomes_project 13 24725206 24734575 - MGP_BALBcJ_P0036582 Prl7a1 protein_coding protein_coding MGP_BALBcJ_T0099390.1 MGP_BALBcJ_G0037426.1 mouse_genomes_project 13 105419651 105419758 - Gm24527 snRNA snRNA MGP_BALBcJ_T0011321.1 MGP_BALBcJ_G0009446.1 mouse_genomes_project 13 5739765 5740060 + Gm23553 misc_RNA misc_RNA MGP_BALBcJ_T0036931.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47154805 47201137 + MGP_BALBcJ_P0036931 Iars protein_coding protein_coding MGP_BALBcJ_T0036932.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47154835 47201137 + MGP_BALBcJ_P0036932 Iars protein_coding protein_coding MGP_BALBcJ_T0036933.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47154896 47161245 + MGP_BALBcJ_P0036933 Iars protein_coding protein_coding MGP_BALBcJ_T0036934.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47160324 47200611 + MGP_BALBcJ_P0036934 Iars protein_coding protein_coding MGP_BALBcJ_T0036935.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47172522 47178531 + MGP_BALBcJ_P0036935 Iars protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036936.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47173273 47182530 + Iars protein_coding retained_intron MGP_BALBcJ_T0036937.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47174932 47181904 + Iars protein_coding retained_intron MGP_BALBcJ_T0036938.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47184603 47189862 + Iars protein_coding retained_intron MGP_BALBcJ_T0036939.1 MGP_BALBcJ_G0020492.1 mouse_genomes_project 13 47188866 47189844 + Iars protein_coding retained_intron MGP_BALBcJ_T0038037.1 MGP_BALBcJ_G0020859.1 mouse_genomes_project 13 102957183 103166061 + MGP_BALBcJ_P0038037 Adamts6 protein_coding protein_coding MGP_BALBcJ_T0036344.1 MGP_BALBcJ_G0020216.1 mouse_genomes_project 13 18243337 18244392 + MGP_BALBcJ_P0036344 Olfr1367 protein_coding protein_coding MGP_BALBcJ_T0009937.1 MGP_BALBcJ_G0008062.1 mouse_genomes_project 13 93015722 93015836 + Gm25109 miRNA miRNA MGP_BALBcJ_T0037544.1 MGP_BALBcJ_G0020710.1 mouse_genomes_project 13 72330693 72352640 + Tppp protein_coding processed_transcript MGP_BALBcJ_T0037545.1 MGP_BALBcJ_G0020710.1 mouse_genomes_project 13 72330705 72357022 + MGP_BALBcJ_P0037545 Tppp protein_coding protein_coding MGP_BALBcJ_T0037546.1 MGP_BALBcJ_G0020710.1 mouse_genomes_project 13 72330719 72342735 + Tppp protein_coding retained_intron MGP_BALBcJ_T0037547.1 MGP_BALBcJ_G0020710.1 mouse_genomes_project 13 72352018 72354868 + Tppp protein_coding processed_transcript MGP_BALBcJ_T0102224.1 MGP_BALBcJ_G0040040.1 mouse_genomes_project 13 30940529 30943581 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036121.1 MGP_BALBcJ_G0020138.1 mouse_genomes_project 13 472644 507283 - MGP_BALBcJ_P0036121 Net1 protein_coding protein_coding MGP_BALBcJ_T0036122.1 MGP_BALBcJ_G0020138.1 mouse_genomes_project 13 472644 484111 - MGP_BALBcJ_P0036122 Net1 protein_coding protein_coding MGP_BALBcJ_T0036741.1 MGP_BALBcJ_G0020418.1 mouse_genomes_project 13 35274482 35309168 - MGP_BALBcJ_P0036741 Cage1 protein_coding protein_coding MGP_BALBcJ_T0036742.1 MGP_BALBcJ_G0020418.1 mouse_genomes_project 13 35274484 35309182 - MGP_BALBcJ_P0036742 Cage1 protein_coding protein_coding MGP_BALBcJ_T0036743.1 MGP_BALBcJ_G0020418.1 mouse_genomes_project 13 35293222 35309313 - MGP_BALBcJ_P0036743 Cage1 protein_coding protein_coding MGP_BALBcJ_T0036744.1 MGP_BALBcJ_G0020418.1 mouse_genomes_project 13 35295511 35309182 - MGP_BALBcJ_P0036744 Cage1 protein_coding protein_coding MGP_BALBcJ_T0036319.1 MGP_BALBcJ_G0020202.1 mouse_genomes_project 13 16527400 16555379 - MGP_BALBcJ_P0036319 Epdr1 protein_coding protein_coding MGP_BALBcJ_T0037586.1 MGP_BALBcJ_G0020729.1 mouse_genomes_project 13 74478515 74518306 - MGP_BALBcJ_P0037586 Arsk protein_coding protein_coding MGP_BALBcJ_T0037587.1 MGP_BALBcJ_G0020729.1 mouse_genomes_project 13 74490422 74518318 - Arsk protein_coding retained_intron MGP_BALBcJ_T0017306.1 MGP_BALBcJ_G0015186.1 mouse_genomes_project 13 20554402 20558323 - Gm11335 processed_transcript processed_transcript MGP_BALBcJ_T0011332.1 MGP_BALBcJ_G0009457.1 mouse_genomes_project 13 52078586 52078847 - Gm22668 misc_RNA misc_RNA MGP_BALBcJ_T0037319.1 MGP_BALBcJ_G0020603.1 mouse_genomes_project 13 58648802 58654108 - MGP_BALBcJ_P0037319 Ctla2b protein_coding protein_coding MGP_BALBcJ_T0037320.1 MGP_BALBcJ_G0020603.1 mouse_genomes_project 13 58648802 58654108 - MGP_BALBcJ_P0037320 Ctla2b protein_coding protein_coding MGP_BALBcJ_T0038132.1 MGP_BALBcJ_G0020885.1 mouse_genomes_project 13 110952947 111048061 + MGP_BALBcJ_P0038132 Ankrd55 protein_coding protein_coding MGP_BALBcJ_T0038133.1 MGP_BALBcJ_G0020885.1 mouse_genomes_project 13 110952947 111048063 + MGP_BALBcJ_P0038133 Ankrd55 protein_coding protein_coding MGP_BALBcJ_T0038134.1 MGP_BALBcJ_G0020885.1 mouse_genomes_project 13 110952947 111009615 + MGP_BALBcJ_P0038134 Ankrd55 protein_coding protein_coding MGP_BALBcJ_T0038135.1 MGP_BALBcJ_G0020885.1 mouse_genomes_project 13 110953014 111021388 + MGP_BALBcJ_P0038135 Ankrd55 protein_coding protein_coding MGP_BALBcJ_T0037130.1 MGP_BALBcJ_G0020541.1 mouse_genomes_project 13 53003143 53007828 - MGP_BALBcJ_P0037130 Mxd3 protein_coding protein_coding MGP_BALBcJ_T0037131.1 MGP_BALBcJ_G0020541.1 mouse_genomes_project 13 53003457 53007803 - Mxd3 protein_coding retained_intron MGP_BALBcJ_T0037132.1 MGP_BALBcJ_G0020541.1 mouse_genomes_project 13 53003687 53007422 - Mxd3 protein_coding processed_transcript MGP_BALBcJ_T0037540.1 MGP_BALBcJ_G0020707.1 mouse_genomes_project 13 72256473 72279810 + MGP_BALBcJ_P0037540 Brd9 protein_coding protein_coding MGP_BALBcJ_T0037541.1 MGP_BALBcJ_G0020707.1 mouse_genomes_project 13 72256529 72279808 + MGP_BALBcJ_P0037541 Brd9 protein_coding unknown_likely_coding MGP_BALBcJ_T0009900.1 MGP_BALBcJ_G0008025.1 mouse_genomes_project 13 20723181 20723319 + Gm44350 miRNA miRNA MGP_BALBcJ_T0017305.1 MGP_BALBcJ_G0015185.1 mouse_genomes_project 13 20318080 20389652 + 4930586N03Rik processed_transcript processed_transcript MGP_BALBcJ_T0009920.1 MGP_BALBcJ_G0008045.1 mouse_genomes_project 13 58053589 58053688 + Gm24999 miRNA miRNA MGP_BALBcJ_T0037888.1 MGP_BALBcJ_G0020814.1 mouse_genomes_project 13 96840819 96856966 - MGP_BALBcJ_P0037888 Utp15 protein_coding protein_coding MGP_BALBcJ_T0036713.1 MGP_BALBcJ_G0020408.1 mouse_genomes_project 13 32890579 33106822 + MGP_BALBcJ_P0036713 Cdyl protein_coding protein_coding MGP_BALBcJ_T0036714.1 MGP_BALBcJ_G0020408.1 mouse_genomes_project 13 32973444 33106816 + MGP_BALBcJ_P0036714 Cdyl protein_coding protein_coding MGP_BALBcJ_T0036715.1 MGP_BALBcJ_G0020408.1 mouse_genomes_project 13 32973996 33106796 + MGP_BALBcJ_P0036715 Cdyl protein_coding unknown_likely_coding MGP_BALBcJ_T0036617.1 MGP_BALBcJ_G0020368.1 mouse_genomes_project 13 28174968 28176155 - MGP_BALBcJ_P0036617 Hus1b protein_coding protein_coding MGP_BALBcJ_T0006578.1 MGP_BALBcJ_G0005447.1 mouse_genomes_project 13 70937665 70938495 - Gm20554 lincRNA lincRNA MGP_BALBcJ_T0012890.1 MGP_BALBcJ_G0010987.1 mouse_genomes_project 13 27958407 27958667 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003444.1 MGP_BALBcJ_G0003156.1 mouse_genomes_project 13 62359199 62378713 + 1810034E14Rik antisense antisense MGP_BALBcJ_T0003445.1 MGP_BALBcJ_G0003156.1 mouse_genomes_project 13 62359271 62377043 + 1810034E14Rik antisense antisense MGP_BALBcJ_T0003446.1 MGP_BALBcJ_G0003156.1 mouse_genomes_project 13 62377045 62378713 + 1810034E14Rik antisense antisense MGP_BALBcJ_T0000884.1 MGP_BALBcJ_G0000815.1 mouse_genomes_project 13 88707197 88707949 + TEC TEC MGP_BALBcJ_T0036368.1 MGP_BALBcJ_G0020226.1 mouse_genomes_project 13 18448309 18449363 - MGP_BALBcJ_P0036368 protein_coding protein_coding MGP_BALBcJ_T0036370.1 MGP_BALBcJ_G0020226.1 mouse_genomes_project 13 18448573 18454118 - MGP_BALBcJ_P0036370 protein_coding protein_coding MGP_BALBcJ_T0102201.1 MGP_BALBcJ_G0040017.1 mouse_genomes_project 13 19880228 19881103 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036682.1 MGP_BALBcJ_G0020398.1 mouse_genomes_project 13 31363298 31366321 - MGP_BALBcJ_P0036682 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0038063.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105603690 105670437 - MGP_BALBcJ_P0038063 Kif2a protein_coding protein_coding MGP_BALBcJ_T0038064.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105605104 105670433 - MGP_BALBcJ_P0038064 Kif2a protein_coding protein_coding MGP_BALBcJ_T0038065.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105607232 105670445 - MGP_BALBcJ_P0038065 Kif2a protein_coding protein_coding MGP_BALBcJ_T0038066.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105607502 105644636 - MGP_BALBcJ_P0038066 Kif2a protein_coding protein_coding MGP_BALBcJ_T0038067.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105609136 105670346 - MGP_BALBcJ_P0038067 Kif2a protein_coding protein_coding MGP_BALBcJ_T0038068.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105616250 105625045 - MGP_BALBcJ_P0038068 Kif2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038069.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105627619 105670067 - MGP_BALBcJ_P0038069 Kif2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038070.1 MGP_BALBcJ_G0020869.1 mouse_genomes_project 13 105635214 105641800 - MGP_BALBcJ_P0038070 Kif2a protein_coding protein_coding MGP_BALBcJ_T0037571.1 MGP_BALBcJ_G0020719.1 mouse_genomes_project 13 72693863 72701726 - MGP_BALBcJ_P0037571 Zfp72 protein_coding protein_coding MGP_BALBcJ_T0009933.1 MGP_BALBcJ_G0008058.1 mouse_genomes_project 13 89233024 89233134 + Gm44338 miRNA miRNA MGP_BALBcJ_T0000876.1 MGP_BALBcJ_G0000807.1 mouse_genomes_project 13 61660242 61661200 - TEC TEC MGP_BALBcJ_T0000885.1 MGP_BALBcJ_G0000816.1 mouse_genomes_project 13 88856425 88857319 - TEC TEC MGP_BALBcJ_T0003474.1 MGP_BALBcJ_G0003171.1 mouse_genomes_project 13 93719605 93720005 + antisense antisense MGP_BALBcJ_T0012907.1 MGP_BALBcJ_G0011004.1 mouse_genomes_project 13 62048200 62048793 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037477.1 MGP_BALBcJ_G0020678.1 mouse_genomes_project 13 66152986 66160972 + MGP_BALBcJ_P0037477 Gm10037 protein_coding protein_coding MGP_BALBcJ_T0012871.1 MGP_BALBcJ_G0010968.1 mouse_genomes_project 13 21342247 21342659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036305.1 MGP_BALBcJ_G0020199.1 mouse_genomes_project 13 15579318 15732055 + MGP_BALBcJ_P0036305 Vps41 protein_coding protein_coding MGP_BALBcJ_T0006509.1 MGP_BALBcJ_G0005400.1 mouse_genomes_project 13 27291758 27297177 + Gm11368 lincRNA lincRNA MGP_BALBcJ_T0037328.1 MGP_BALBcJ_G0020610.1 mouse_genomes_project 13 58957467 58965749 - MGP_BALBcJ_P0037328 Cts6 protein_coding protein_coding MGP_BALBcJ_T0037014.1 MGP_BALBcJ_G0020518.1 mouse_genomes_project 13 52109725 52120051 - MGP_BALBcJ_P0037014 Thoc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0037015.1 MGP_BALBcJ_G0020518.1 mouse_genomes_project 13 52109733 52120153 - MGP_BALBcJ_P0037015 Thoc3 protein_coding protein_coding MGP_BALBcJ_T0037016.1 MGP_BALBcJ_G0020518.1 mouse_genomes_project 13 52114577 52120092 - Thoc3 protein_coding processed_transcript MGP_BALBcJ_T0037017.1 MGP_BALBcJ_G0020518.1 mouse_genomes_project 13 52119112 52120130 - Thoc3 protein_coding retained_intron MGP_BALBcJ_T0036460.1 MGP_BALBcJ_G0020296.1 mouse_genomes_project 13 20601022 20602424 + MGP_BALBcJ_P0036460 Hist1h2bg protein_coding protein_coding MGP_BALBcJ_T0036676.1 MGP_BALBcJ_G0020395.1 mouse_genomes_project 13 31239937 31271101 + MGP_BALBcJ_P0036676 Ripk1 protein_coding protein_coding MGP_BALBcJ_T0036677.1 MGP_BALBcJ_G0020395.1 mouse_genomes_project 13 31239974 31252262 + Ripk1 protein_coding retained_intron MGP_BALBcJ_T0036678.1 MGP_BALBcJ_G0020395.1 mouse_genomes_project 13 31240448 31272594 + MGP_BALBcJ_P0036678 Ripk1 protein_coding protein_coding MGP_BALBcJ_T0036679.1 MGP_BALBcJ_G0020395.1 mouse_genomes_project 13 31247273 31270206 + MGP_BALBcJ_P0036679 Ripk1 protein_coding protein_coding MGP_BALBcJ_T0036776.1 MGP_BALBcJ_G0020434.1 mouse_genomes_project 13 38445977 38454533 - MGP_BALBcJ_P0036776 Gcm2 protein_coding protein_coding MGP_BALBcJ_T0036321.1 MGP_BALBcJ_G0020204.1 mouse_genomes_project 13 16580577 16635902 - MGP_BALBcJ_P0036321 Nme8 protein_coding protein_coding MGP_BALBcJ_T0036322.1 MGP_BALBcJ_G0020204.1 mouse_genomes_project 13 16580577 16635936 - MGP_BALBcJ_P0036322 Nme8 protein_coding protein_coding MGP_BALBcJ_T0036323.1 MGP_BALBcJ_G0020204.1 mouse_genomes_project 13 16615674 16627816 - Nme8 protein_coding processed_transcript MGP_BALBcJ_T0012858.1 MGP_BALBcJ_G0010955.1 mouse_genomes_project 13 18825363 18826992 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037413.1 MGP_BALBcJ_G0020644.1 mouse_genomes_project 13 65051981 65055265 + MGP_BALBcJ_P0037413 Gm10767 protein_coding protein_coding MGP_BALBcJ_T0037037.1 MGP_BALBcJ_G0020522.1 mouse_genomes_project 13 52240753 52247065 - MGP_BALBcJ_P0037037 Nop16 protein_coding protein_coding MGP_BALBcJ_T0037038.1 MGP_BALBcJ_G0020522.1 mouse_genomes_project 13 52241104 52247033 - MGP_BALBcJ_P0037038 Nop16 protein_coding protein_coding MGP_BALBcJ_T0037039.1 MGP_BALBcJ_G0020522.1 mouse_genomes_project 13 52241807 52246951 - MGP_BALBcJ_P0037039 Nop16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036787.1 MGP_BALBcJ_G0020441.1 mouse_genomes_project 13 39003754 39004582 + MGP_BALBcJ_P0036787 Gm5082 protein_coding protein_coding MGP_BALBcJ_T0036320.1 MGP_BALBcJ_G0020203.1 mouse_genomes_project 13 16558737 16568362 + MGP_BALBcJ_P0036320 Sfrp4 protein_coding protein_coding MGP_BALBcJ_T0037222.1 MGP_BALBcJ_G0020575.1 mouse_genomes_project 13 55140589 55629216 - MGP_BALBcJ_P0037222 Spock1 protein_coding protein_coding MGP_BALBcJ_T0037223.1 MGP_BALBcJ_G0020575.1 mouse_genomes_project 13 55140601 55629177 - MGP_BALBcJ_P0037223 Spock1 protein_coding protein_coding MGP_BALBcJ_T0037224.1 MGP_BALBcJ_G0020575.1 mouse_genomes_project 13 55145488 55629177 - MGP_BALBcJ_P0037224 Spock1 protein_coding protein_coding MGP_BALBcJ_T0037225.1 MGP_BALBcJ_G0020575.1 mouse_genomes_project 13 55148142 55629193 - MGP_BALBcJ_P0037225 Spock1 protein_coding protein_coding MGP_BALBcJ_T0037226.1 MGP_BALBcJ_G0020575.1 mouse_genomes_project 13 55148727 55628489 - MGP_BALBcJ_P0037226 Spock1 protein_coding protein_coding MGP_BALBcJ_T0037227.1 MGP_BALBcJ_G0020575.1 mouse_genomes_project 13 55153847 55629201 - Spock1 protein_coding retained_intron MGP_BALBcJ_T0036439.1 MGP_BALBcJ_G0020281.1 mouse_genomes_project 13 20134118 20135015 - MGP_BALBcJ_P0036439 Vmn1r220 protein_coding protein_coding MGP_BALBcJ_T0037122.1 MGP_BALBcJ_G0020536.1 mouse_genomes_project 13 52810407 52810994 - MGP_BALBcJ_P0037122 Gm17617 protein_coding protein_coding MGP_BALBcJ_T0036428.1 MGP_BALBcJ_G0020270.1 mouse_genomes_project 13 19750020 19751019 - MGP_BALBcJ_P0036428 Vmn1r208 protein_coding protein_coding MGP_BALBcJ_T0037261.1 MGP_BALBcJ_G0020586.1 mouse_genomes_project 13 56554303 56687731 + MGP_BALBcJ_P0037261 protein_coding protein_coding MGP_BALBcJ_T0037262.1 MGP_BALBcJ_G0020586.1 mouse_genomes_project 13 56555607 56876124 + MGP_BALBcJ_P0037262 protein_coding protein_coding MGP_BALBcJ_T0037843.1 MGP_BALBcJ_G0020799.1 mouse_genomes_project 13 94933959 94961271 + MGP_BALBcJ_P0037843 Poc5 protein_coding protein_coding MGP_BALBcJ_T0036926.1 MGP_BALBcJ_G0020488.1 mouse_genomes_project 13 47015974 47039075 + MGP_BALBcJ_P0036926 Aspn protein_coding protein_coding MGP_BALBcJ_T0036927.1 MGP_BALBcJ_G0020488.1 mouse_genomes_project 13 47015974 47039075 + MGP_BALBcJ_P0036927 Aspn protein_coding protein_coding MGP_BALBcJ_T0036441.1 MGP_BALBcJ_G0020283.1 mouse_genomes_project 13 20355654 20374200 - MGP_BALBcJ_P0036441 Zfp322a protein_coding protein_coding MGP_BALBcJ_T0036442.1 MGP_BALBcJ_G0020283.1 mouse_genomes_project 13 20362022 20373992 - MGP_BALBcJ_P0036442 Zfp322a protein_coding protein_coding MGP_BALBcJ_T0036443.1 MGP_BALBcJ_G0020283.1 mouse_genomes_project 13 20362023 20374193 - MGP_BALBcJ_P0036443 Zfp322a protein_coding protein_coding MGP_BALBcJ_T0036444.1 MGP_BALBcJ_G0020283.1 mouse_genomes_project 13 20362184 20374186 - MGP_BALBcJ_P0036444 Zfp322a protein_coding protein_coding MGP_BALBcJ_T0037872.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684231 95701765 + MGP_BALBcJ_P0037872 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037873.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684231 95723451 + MGP_BALBcJ_P0037873 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037874.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684271 95721643 + Gfm2 protein_coding retained_intron MGP_BALBcJ_T0037875.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684272 95723461 + MGP_BALBcJ_P0037875 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037876.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684279 95715419 + MGP_BALBcJ_P0037876 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037877.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684292 95690626 + Gfm2 protein_coding retained_intron MGP_BALBcJ_T0037878.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684296 95728205 + MGP_BALBcJ_P0037878 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037879.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684302 95692597 + MGP_BALBcJ_P0037879 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037880.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95684334 95723461 + MGP_BALBcJ_P0037880 Gfm2 protein_coding protein_coding MGP_BALBcJ_T0037881.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95696637 95709869 + MGP_BALBcJ_P0037881 Gfm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037882.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95707317 95723461 + Gfm2 protein_coding retained_intron MGP_BALBcJ_T0037883.1 MGP_BALBcJ_G0020809.1 mouse_genomes_project 13 95718458 95724496 + Gfm2 protein_coding retained_intron MGP_BALBcJ_T0099388.1 MGP_BALBcJ_G0037424.1 mouse_genomes_project 13 99272572 99272676 + Gm24261 snRNA snRNA MGP_BALBcJ_T0037981.1 MGP_BALBcJ_G0020847.1 mouse_genomes_project 13 99479542 99510296 - MGP_BALBcJ_P0037981 Slc30a5 protein_coding protein_coding MGP_BALBcJ_T0036142.1 MGP_BALBcJ_G0020148.1 mouse_genomes_project 13 1160598 1178109 + MGP_BALBcJ_P0036142 Akr1c21 protein_coding protein_coding MGP_BALBcJ_T0036143.1 MGP_BALBcJ_G0020148.1 mouse_genomes_project 13 1163680 1168041 + Akr1c21 protein_coding retained_intron MGP_BALBcJ_T0006498.1 MGP_BALBcJ_G0005393.1 mouse_genomes_project 13 21427506 21436681 - Gm11345 lincRNA lincRNA MGP_BALBcJ_T0036364.1 MGP_BALBcJ_G0020224.1 mouse_genomes_project 13 18406481 18408405 + MGP_BALBcJ_P0036364 AK157302 protein_coding protein_coding MGP_BALBcJ_T0036514.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21642809 21801575 + MGP_BALBcJ_P0036514 Fam65b protein_coding protein_coding MGP_BALBcJ_T0036515.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21676144 21767083 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0036516.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21676144 21770920 + MGP_BALBcJ_P0036516 Fam65b protein_coding protein_coding MGP_BALBcJ_T0036517.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21676161 21770816 + MGP_BALBcJ_P0036517 Fam65b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036518.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21700182 21801575 + MGP_BALBcJ_P0036518 Fam65b protein_coding protein_coding MGP_BALBcJ_T0036519.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21700184 21737196 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0036520.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21700218 21762421 + MGP_BALBcJ_P0036520 Fam65b protein_coding protein_coding MGP_BALBcJ_T0036521.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21700230 21770920 + MGP_BALBcJ_P0036521 Fam65b protein_coding protein_coding MGP_BALBcJ_T0036522.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21700247 21760646 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0036523.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21738129 21743489 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0036524.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21740941 21743485 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0036525.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21753472 21758980 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0036526.1 MGP_BALBcJ_G0020325.1 mouse_genomes_project 13 21775059 21780682 + Fam65b protein_coding retained_intron MGP_BALBcJ_T0012878.1 MGP_BALBcJ_G0010975.1 mouse_genomes_project 13 22751296 22752166 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000882.1 MGP_BALBcJ_G0000813.1 mouse_genomes_project 13 83852698 83852936 - TEC TEC MGP_BALBcJ_T0037759.1 MGP_BALBcJ_G0020765.1 mouse_genomes_project 13 90903054 90918812 + MGP_BALBcJ_P0037759 Ankrd34b protein_coding protein_coding MGP_BALBcJ_T0037760.1 MGP_BALBcJ_G0020765.1 mouse_genomes_project 13 90903499 90915507 + MGP_BALBcJ_P0037760 Ankrd34b protein_coding protein_coding MGP_BALBcJ_T0037761.1 MGP_BALBcJ_G0020765.1 mouse_genomes_project 13 90903816 90918084 + MGP_BALBcJ_P0037761 Ankrd34b protein_coding protein_coding MGP_BALBcJ_T0037900.1 MGP_BALBcJ_G0020818.1 mouse_genomes_project 13 96948941 96951403 + MGP_BALBcJ_P0037900 Foxd1 protein_coding protein_coding MGP_BALBcJ_T0003468.1 MGP_BALBcJ_G0003167.1 mouse_genomes_project 13 90349357 90349970 + 1700119I11Rik antisense antisense MGP_BALBcJ_T0003469.1 MGP_BALBcJ_G0003167.1 mouse_genomes_project 13 90349410 90349964 + 1700119I11Rik antisense antisense MGP_BALBcJ_T0036653.1 MGP_BALBcJ_G0020391.1 mouse_genomes_project 13 31080894 31091906 - MGP_BALBcJ_P0036653 Serpinb6e protein_coding protein_coding MGP_BALBcJ_T0036654.1 MGP_BALBcJ_G0020391.1 mouse_genomes_project 13 31089500 31091906 - MGP_BALBcJ_P0036654 Serpinb6e protein_coding protein_coding MGP_BALBcJ_T0038143.1 MGP_BALBcJ_G0020887.1 mouse_genomes_project 13 111189622 111248015 - MGP_BALBcJ_P0038143 Il31ra protein_coding protein_coding MGP_BALBcJ_T0006576.1 MGP_BALBcJ_G0005446.1 mouse_genomes_project 13 68319123 68342450 - 1700084F23Rik lincRNA lincRNA MGP_BALBcJ_T0006577.1 MGP_BALBcJ_G0005446.1 mouse_genomes_project 13 68326975 68341934 - 1700084F23Rik lincRNA lincRNA MGP_BALBcJ_T0036448.1 MGP_BALBcJ_G0020286.1 mouse_genomes_project 13 20505312 20516543 - MGP_BALBcJ_P0036448 Btn2a2 protein_coding protein_coding MGP_BALBcJ_T0036449.1 MGP_BALBcJ_G0020286.1 mouse_genomes_project 13 20505312 20516560 - MGP_BALBcJ_P0036449 Btn2a2 protein_coding protein_coding MGP_BALBcJ_T0036450.1 MGP_BALBcJ_G0020286.1 mouse_genomes_project 13 20505524 20516550 - MGP_BALBcJ_P0036450 Btn2a2 protein_coding protein_coding MGP_BALBcJ_T0037301.1 MGP_BALBcJ_G0020590.1 mouse_genomes_project 13 57441564 57448445 - MGP_BALBcJ_P0037301 4921517D22Rik protein_coding protein_coding MGP_BALBcJ_T0037962.1 MGP_BALBcJ_G0020841.1 mouse_genomes_project 13 99319658 99323671 + MGP_BALBcJ_P0037962 Taf9 protein_coding protein_coding MGP_BALBcJ_T0100665.1 MGP_BALBcJ_G0038701.1 mouse_genomes_project 13 98304185 98304316 - Gm24471 snoRNA snoRNA MGP_BALBcJ_T0038191.1 MGP_BALBcJ_G0020912.1 mouse_genomes_project 13 115576373 115760325 - MGP_BALBcJ_P0038191 Parp8 protein_coding protein_coding MGP_BALBcJ_T0037522.1 MGP_BALBcJ_G0020700.1 mouse_genomes_project 13 71916916 71933554 + MGP_BALBcJ_P0037522 Clptm1l protein_coding protein_coding MGP_BALBcJ_T0038158.1 MGP_BALBcJ_G0020896.1 mouse_genomes_project 13 111715526 111718469 - MGP_BALBcJ_P0038158 Gm10735 protein_coding protein_coding MGP_BALBcJ_T0036479.1 MGP_BALBcJ_G0020311.1 mouse_genomes_project 13 20804117 20804514 + MGP_BALBcJ_P0036479 Hist1h4b protein_coding protein_coding MGP_BALBcJ_T0038159.1 MGP_BALBcJ_G0020897.1 mouse_genomes_project 13 111718991 111722716 - MGP_BALBcJ_P0038159 Gpx8 protein_coding protein_coding MGP_BALBcJ_T0003485.1 MGP_BALBcJ_G0003177.1 mouse_genomes_project 13 105425835 105436130 + Gm28989 antisense antisense MGP_BALBcJ_T0006559.1 MGP_BALBcJ_G0005432.1 mouse_genomes_project 13 51053916 51064678 - Gm43262 lincRNA lincRNA MGP_BALBcJ_T0036561.1 MGP_BALBcJ_G0020341.1 mouse_genomes_project 13 24286232 24293598 + MGP_BALBcJ_P0036561 Prl3c1 protein_coding protein_coding MGP_BALBcJ_T0036562.1 MGP_BALBcJ_G0020341.1 mouse_genomes_project 13 24288751 24293598 + MGP_BALBcJ_P0036562 Prl3c1 protein_coding protein_coding MGP_BALBcJ_T0036563.1 MGP_BALBcJ_G0020341.1 mouse_genomes_project 13 24289201 24293461 + MGP_BALBcJ_P0036563 Prl3c1 protein_coding protein_coding MGP_BALBcJ_T0036336.1 MGP_BALBcJ_G0020213.1 mouse_genomes_project 13 18084886 18085855 + Trim27 protein_coding processed_transcript MGP_BALBcJ_T0036337.1 MGP_BALBcJ_G0020213.1 mouse_genomes_project 13 18085651 18099951 + MGP_BALBcJ_P0036337 Trim27 protein_coding protein_coding MGP_BALBcJ_T0036338.1 MGP_BALBcJ_G0020213.1 mouse_genomes_project 13 18095295 18095855 + Trim27 protein_coding retained_intron MGP_BALBcJ_T0036339.1 MGP_BALBcJ_G0020213.1 mouse_genomes_project 13 18095526 18097910 + MGP_BALBcJ_P0036339 Trim27 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009915.1 MGP_BALBcJ_G0008040.1 mouse_genomes_project 13 53163891 53163987 - Mir6944 miRNA miRNA MGP_BALBcJ_T0036681.1 MGP_BALBcJ_G0020397.1 mouse_genomes_project 13 31362809 31366442 - MGP_BALBcJ_P0036681 protein_coding protein_coding MGP_BALBcJ_T0036435.1 MGP_BALBcJ_G0020277.1 mouse_genomes_project 13 20049452 20050349 + MGP_BALBcJ_P0036435 Vmn1r216 protein_coding protein_coding MGP_BALBcJ_T0009940.1 MGP_BALBcJ_G0008065.1 mouse_genomes_project 13 106489588 106489728 - Gm22118 miRNA miRNA MGP_BALBcJ_T0037470.1 MGP_BALBcJ_G0020673.1 mouse_genomes_project 13 65946249 65962292 - MGP_BALBcJ_P0037470 Zfp65 protein_coding protein_coding MGP_BALBcJ_T0038216.1 MGP_BALBcJ_G0020924.1 mouse_genomes_project 13 118226748 118231204 + MGP_BALBcJ_P0038216 protein_coding protein_coding MGP_BALBcJ_T0036453.1 MGP_BALBcJ_G0020289.1 mouse_genomes_project 13 20562754 20573074 + MGP_BALBcJ_P0036453 Hist1h3e protein_coding protein_coding MGP_BALBcJ_T0012851.1 MGP_BALBcJ_G0010948.1 mouse_genomes_project 13 16350953 16351402 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036456.1 MGP_BALBcJ_G0020292.1 mouse_genomes_project 13 20572222 20573074 + MGP_BALBcJ_P0036456 Hist1h3f protein_coding protein_coding MGP_BALBcJ_T0009947.1 MGP_BALBcJ_G0008072.1 mouse_genomes_project 13 117989371 117989508 - Gm44488 miRNA miRNA MGP_BALBcJ_T0036298.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 14974471 15237337 - MGP_BALBcJ_P0036298 Pou6f2 protein_coding protein_coding MGP_BALBcJ_T0036299.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 14978456 15237337 - MGP_BALBcJ_P0036299 Pou6f2 protein_coding protein_coding MGP_BALBcJ_T0036300.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 14978487 15025549 - MGP_BALBcJ_P0036300 Pou6f2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036301.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 14978525 15363928 - MGP_BALBcJ_P0036301 Pou6f2 protein_coding unknown_likely_coding MGP_BALBcJ_T0036302.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 14992009 15039391 - Pou6f2 protein_coding processed_transcript MGP_BALBcJ_T0036303.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 14992009 15025554 - MGP_BALBcJ_P0036303 Pou6f2 protein_coding protein_coding MGP_BALBcJ_T0036304.1 MGP_BALBcJ_G0020198.1 mouse_genomes_project 13 15001290 15237337 - Pou6f2 protein_coding processed_transcript MGP_BALBcJ_T0038086.1 MGP_BALBcJ_G0020876.1 mouse_genomes_project 13 106996138 107070379 + MGP_BALBcJ_P0038086 Depdc1b protein_coding protein_coding MGP_BALBcJ_T0038087.1 MGP_BALBcJ_G0020876.1 mouse_genomes_project 13 106996174 107004327 + Depdc1b protein_coding retained_intron MGP_BALBcJ_T0038088.1 MGP_BALBcJ_G0020876.1 mouse_genomes_project 13 106996186 107082183 + MGP_BALBcJ_P0038088 Depdc1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038089.1 MGP_BALBcJ_G0020876.1 mouse_genomes_project 13 106996228 107069506 + MGP_BALBcJ_P0038089 Depdc1b protein_coding protein_coding MGP_BALBcJ_T0038090.1 MGP_BALBcJ_G0020876.1 mouse_genomes_project 13 107006386 107048591 + Depdc1b protein_coding processed_transcript MGP_BALBcJ_T0038091.1 MGP_BALBcJ_G0020876.1 mouse_genomes_project 13 107037630 107053665 + Depdc1b protein_coding retained_intron MGP_BALBcJ_T0100644.1 MGP_BALBcJ_G0038680.1 mouse_genomes_project 13 47157006 47157139 + Gm25394 snoRNA snoRNA MGP_BALBcJ_T0012857.1 MGP_BALBcJ_G0010954.1 mouse_genomes_project 13 18793166 18794163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037407.1 MGP_BALBcJ_G0020642.1 mouse_genomes_project 13 63360274 63390515 + MGP_BALBcJ_P0037407 Zfp369 protein_coding protein_coding MGP_BALBcJ_T0037408.1 MGP_BALBcJ_G0020642.1 mouse_genomes_project 13 63360274 63380767 + MGP_BALBcJ_P0037408 Zfp369 protein_coding protein_coding MGP_BALBcJ_T0037409.1 MGP_BALBcJ_G0020642.1 mouse_genomes_project 13 63360312 63370472 + Zfp369 protein_coding retained_intron MGP_BALBcJ_T0037410.1 MGP_BALBcJ_G0020642.1 mouse_genomes_project 13 63360363 63367955 + MGP_BALBcJ_P0037410 Zfp369 protein_coding protein_coding MGP_BALBcJ_T0009925.1 MGP_BALBcJ_G0008050.1 mouse_genomes_project 13 61387174 61387248 + Mir23b miRNA miRNA MGP_BALBcJ_T0099384.1 MGP_BALBcJ_G0037420.1 mouse_genomes_project 13 88403725 88403827 - Gm24498 snRNA snRNA MGP_BALBcJ_T0036363.1 MGP_BALBcJ_G0020223.1 mouse_genomes_project 13 18390317 18396892 + MGP_BALBcJ_P0036363 Zkscan4 protein_coding protein_coding MGP_BALBcJ_T0037632.1 MGP_BALBcJ_G0020740.1 mouse_genomes_project 13 80112383 80149430 - MGP_BALBcJ_P0037632 Polr3g protein_coding protein_coding MGP_BALBcJ_T0037633.1 MGP_BALBcJ_G0020740.1 mouse_genomes_project 13 80112420 80125783 - Polr3g protein_coding retained_intron MGP_BALBcJ_T0037634.1 MGP_BALBcJ_G0020740.1 mouse_genomes_project 13 80132363 80149373 - MGP_BALBcJ_P0037634 Polr3g protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037635.1 MGP_BALBcJ_G0020740.1 mouse_genomes_project 13 80132800 80149362 - MGP_BALBcJ_P0037635 Polr3g protein_coding protein_coding MGP_BALBcJ_T0037636.1 MGP_BALBcJ_G0020740.1 mouse_genomes_project 13 80137801 80149419 - Polr3g protein_coding retained_intron MGP_BALBcJ_T0036608.1 MGP_BALBcJ_G0020363.1 mouse_genomes_project 13 27564716 27574168 + Agtr1a protein_coding processed_transcript MGP_BALBcJ_T0036609.1 MGP_BALBcJ_G0020363.1 mouse_genomes_project 13 27564716 27608263 + MGP_BALBcJ_P0036609 Agtr1a protein_coding protein_coding MGP_BALBcJ_T0037310.1 MGP_BALBcJ_G0020596.1 mouse_genomes_project 13 57530826 57582892 - MGP_BALBcJ_P0037310 Zcchc6 protein_coding protein_coding MGP_BALBcJ_T0037311.1 MGP_BALBcJ_G0020596.1 mouse_genomes_project 13 57531739 57581824 - MGP_BALBcJ_P0037311 Zcchc6 protein_coding unknown_likely_coding MGP_BALBcJ_T0036726.1 MGP_BALBcJ_G0020414.1 mouse_genomes_project 13 34125794 34302749 - MGP_BALBcJ_P0036726 F13a1 protein_coding protein_coding MGP_BALBcJ_T0036727.1 MGP_BALBcJ_G0020414.1 mouse_genomes_project 13 34125794 34303744 - MGP_BALBcJ_P0036727 F13a1 protein_coding protein_coding MGP_BALBcJ_T0012905.1 MGP_BALBcJ_G0011002.1 mouse_genomes_project 13 60860315 60860651 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036760.1 MGP_BALBcJ_G0020427.1 mouse_genomes_project 13 37312226 37609393 - MGP_BALBcJ_P0036760 Ofcc1 protein_coding protein_coding MGP_BALBcJ_T0012944.1 MGP_BALBcJ_G0011041.1 mouse_genomes_project 13 111788827 111789086 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012862.1 MGP_BALBcJ_G0010959.1 mouse_genomes_project 13 19201037 19202939 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037308.1 MGP_BALBcJ_G0020595.1 mouse_genomes_project 13 57514744 57528653 - MGP_BALBcJ_P0037308 protein_coding unknown_likely_coding MGP_BALBcJ_T0037309.1 MGP_BALBcJ_G0020595.1 mouse_genomes_project 13 57518342 57528725 - protein_coding retained_intron MGP_BALBcJ_T0037830.1 MGP_BALBcJ_G0020790.1 mouse_genomes_project 13 93862015 93886685 - MGP_BALBcJ_P0037830 Aggf1 protein_coding protein_coding MGP_BALBcJ_T0037831.1 MGP_BALBcJ_G0020790.1 mouse_genomes_project 13 93864834 93886667 - Aggf1 protein_coding processed_transcript MGP_BALBcJ_T0009923.1 MGP_BALBcJ_G0008048.1 mouse_genomes_project 13 60671010 60671117 + Gm22256 miRNA miRNA MGP_BALBcJ_T0003481.1 MGP_BALBcJ_G0003174.1 mouse_genomes_project 13 101439267 101440913 + 1700099I09Rik antisense antisense MGP_BALBcJ_T0003482.1 MGP_BALBcJ_G0003174.1 mouse_genomes_project 13 101439282 101440879 + 1700099I09Rik antisense antisense MGP_BALBcJ_T0006611.1 MGP_BALBcJ_G0005470.1 mouse_genomes_project 13 98128859 98133748 + Gm26559 lincRNA lincRNA MGP_BALBcJ_T0000895.1 MGP_BALBcJ_G0000826.1 mouse_genomes_project 13 110885037 110886312 + TEC TEC MGP_BALBcJ_T0012874.1 MGP_BALBcJ_G0010971.1 mouse_genomes_project 13 22196839 22197157 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036814.1 MGP_BALBcJ_G0020449.1 mouse_genomes_project 13 40771891 40776713 + MGP_BALBcJ_P0036814 Nol7 protein_coding protein_coding MGP_BALBcJ_T0003413.1 MGP_BALBcJ_G0003133.1 mouse_genomes_project 13 18862669 18867487 - Gm11280 antisense antisense MGP_BALBcJ_T0009914.1 MGP_BALBcJ_G0008039.1 mouse_genomes_project 13 53138281 53138347 + Mir6943 miRNA miRNA MGP_BALBcJ_T0037379.1 MGP_BALBcJ_G0020624.1 mouse_genomes_project 13 62164858 62195708 - MGP_BALBcJ_P0037379 Hsd17b3 protein_coding protein_coding MGP_BALBcJ_T0037380.1 MGP_BALBcJ_G0020624.1 mouse_genomes_project 13 62164858 62195723 - MGP_BALBcJ_P0037380 Hsd17b3 protein_coding protein_coding MGP_BALBcJ_T0037206.1 MGP_BALBcJ_G0020571.1 mouse_genomes_project 13 54243230 54249307 - MGP_BALBcJ_P0037206 Lect2 protein_coding protein_coding MGP_BALBcJ_T0099368.1 MGP_BALBcJ_G0037404.1 mouse_genomes_project 13 30006271 30006380 + Gm27342 snRNA snRNA MGP_BALBcJ_T0006581.1 MGP_BALBcJ_G0005450.1 mouse_genomes_project 13 79381972 79388028 - Gm4211 lincRNA lincRNA MGP_BALBcJ_T0009896.1 MGP_BALBcJ_G0008021.1 mouse_genomes_project 13 18818264 18818396 - Mir1983 miRNA miRNA MGP_BALBcJ_T0036194.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5724332 5802498 + MGP_BALBcJ_P0036194 Larp4b protein_coding protein_coding MGP_BALBcJ_T0036195.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5724358 5802690 + MGP_BALBcJ_P0036195 Larp4b protein_coding protein_coding MGP_BALBcJ_T0036196.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5724363 5754380 + MGP_BALBcJ_P0036196 Larp4b protein_coding protein_coding MGP_BALBcJ_T0036197.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5724433 5805865 + MGP_BALBcJ_P0036197 Larp4b protein_coding protein_coding MGP_BALBcJ_T0036198.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5724594 5805824 + MGP_BALBcJ_P0036198 Larp4b protein_coding unknown_likely_coding MGP_BALBcJ_T0036199.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5767059 5775163 + Larp4b protein_coding processed_transcript MGP_BALBcJ_T0036200.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5767279 5768045 + Larp4b protein_coding processed_transcript MGP_BALBcJ_T0036201.1 MGP_BALBcJ_G0020162.1 mouse_genomes_project 13 5799754 5804535 + Larp4b protein_coding retained_intron MGP_BALBcJ_T0036386.1 MGP_BALBcJ_G0020240.1 mouse_genomes_project 13 18693211 18693954 - MGP_BALBcJ_P0036386 Hist1h1b protein_coding protein_coding MGP_BALBcJ_T0012875.1 MGP_BALBcJ_G0010972.1 mouse_genomes_project 13 22521512 22522220 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036290.1 MGP_BALBcJ_G0020192.1 mouse_genomes_project 13 12836176 12851657 + MGP_BALBcJ_P0036290 Inhba protein_coding protein_coding MGP_BALBcJ_T0036291.1 MGP_BALBcJ_G0020192.1 mouse_genomes_project 13 12838800 12851680 + MGP_BALBcJ_P0036291 Inhba protein_coding protein_coding MGP_BALBcJ_T0038049.1 MGP_BALBcJ_G0020864.1 mouse_genomes_project 13 103746212 103786569 + MGP_BALBcJ_P0038049 4933425L06Rik protein_coding protein_coding MGP_BALBcJ_T0006523.1 MGP_BALBcJ_G0005410.1 mouse_genomes_project 13 28849429 28850631 + Gm11378 lincRNA lincRNA MGP_BALBcJ_T0012915.1 MGP_BALBcJ_G0011012.1 mouse_genomes_project 13 68085204 68085493 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037528.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 71993779 72015226 - MGP_BALBcJ_P0037528 Slc6a19 protein_coding protein_coding MGP_BALBcJ_T0037529.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 71993781 72015141 - Slc6a19 protein_coding retained_intron MGP_BALBcJ_T0037530.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 71993781 72006671 - Slc6a19 protein_coding processed_transcript MGP_BALBcJ_T0037531.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 72003121 72019309 - Slc6a19 protein_coding processed_transcript MGP_BALBcJ_T0037532.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 72003604 72006414 - Slc6a19 protein_coding processed_transcript MGP_BALBcJ_T0037533.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 72003772 72015127 - MGP_BALBcJ_P0037533 Slc6a19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037534.1 MGP_BALBcJ_G0020703.1 mouse_genomes_project 13 72003810 72006289 - Slc6a19 protein_coding processed_transcript MGP_BALBcJ_T0037737.1 MGP_BALBcJ_G0020760.1 mouse_genomes_project 13 90340690 90366216 - MGP_BALBcJ_P0037737 Ckmt2 protein_coding protein_coding MGP_BALBcJ_T0036755.1 MGP_BALBcJ_G0020424.1 mouse_genomes_project 13 35882722 35916119 - MGP_BALBcJ_P0036755 Bloc1s5 protein_coding protein_coding MGP_BALBcJ_T0006550.1 MGP_BALBcJ_G0005430.1 mouse_genomes_project 13 49592694 49596062 + Gm26651 lincRNA lincRNA MGP_BALBcJ_T0037511.1 MGP_BALBcJ_G0020695.1 mouse_genomes_project 13 71626378 71626678 + MGP_BALBcJ_P0037511 Gm10263 protein_coding protein_coding MGP_BALBcJ_T0037188.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53770264 53831875 - MGP_BALBcJ_P0037188 H2afy protein_coding protein_coding MGP_BALBcJ_T0037189.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53770264 53831875 - MGP_BALBcJ_P0037189 H2afy protein_coding protein_coding MGP_BALBcJ_T0037190.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53770812 53781549 - H2afy protein_coding retained_intron MGP_BALBcJ_T0037191.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53771005 53787093 - H2afy protein_coding retained_intron MGP_BALBcJ_T0037192.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53792590 53831774 - H2afy protein_coding processed_transcript MGP_BALBcJ_T0037193.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53797028 53831684 - H2afy protein_coding retained_intron MGP_BALBcJ_T0037194.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53800569 53832603 - H2afy protein_coding processed_transcript MGP_BALBcJ_T0037195.1 MGP_BALBcJ_G0020563.1 mouse_genomes_project 13 53800580 53831069 - H2afy protein_coding processed_transcript MGP_BALBcJ_T0102203.1 MGP_BALBcJ_G0040019.1 mouse_genomes_project 13 19890351 19891312 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036537.1 MGP_BALBcJ_G0020330.1 mouse_genomes_project 13 21907829 21966119 + MGP_BALBcJ_P0036537 D130043K22Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0036538.1 MGP_BALBcJ_G0020330.1 mouse_genomes_project 13 21907846 21967590 + MGP_BALBcJ_P0036538 D130043K22Rik protein_coding protein_coding MGP_BALBcJ_T0036539.1 MGP_BALBcJ_G0020330.1 mouse_genomes_project 13 21907846 21967583 + MGP_BALBcJ_P0036539 D130043K22Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036540.1 MGP_BALBcJ_G0020330.1 mouse_genomes_project 13 21946883 21949018 + D130043K22Rik protein_coding processed_transcript MGP_BALBcJ_T0036541.1 MGP_BALBcJ_G0020330.1 mouse_genomes_project 13 21959408 21966168 + D130043K22Rik protein_coding processed_transcript MGP_BALBcJ_T0006535.1 MGP_BALBcJ_G0005419.1 mouse_genomes_project 13 38706092 38716587 + Gm26877 lincRNA lincRNA MGP_BALBcJ_T0099377.1 MGP_BALBcJ_G0037413.1 mouse_genomes_project 13 44315188 44315292 + Gm22960 snRNA snRNA MGP_BALBcJ_T0037867.1 MGP_BALBcJ_G0020805.1 mouse_genomes_project 13 95465748 95492234 + MGP_BALBcJ_P0037867 Gcnt4 protein_coding protein_coding MGP_BALBcJ_T0037337.1 MGP_BALBcJ_G0020618.1 mouse_genomes_project 13 60928654 60949947 - MGP_BALBcJ_P0037337 Fbp2 protein_coding protein_coding MGP_BALBcJ_T0038165.1 MGP_BALBcJ_G0020901.1 mouse_genomes_project 13 111966129 112042541 + MGP_BALBcJ_P0038165 BC067074 protein_coding protein_coding MGP_BALBcJ_T0038166.1 MGP_BALBcJ_G0020901.1 mouse_genomes_project 13 112014065 112043539 + MGP_BALBcJ_P0038166 BC067074 protein_coding protein_coding MGP_BALBcJ_T0038167.1 MGP_BALBcJ_G0020901.1 mouse_genomes_project 13 112023454 112053299 + MGP_BALBcJ_P0038167 BC067074 protein_coding protein_coding MGP_BALBcJ_T0038226.1 MGP_BALBcJ_G0020931.1 mouse_genomes_project 13 118487058 118488287 + MGP_BALBcJ_P0038226 Gm21762 protein_coding protein_coding MGP_BALBcJ_T0038228.1 MGP_BALBcJ_G0020931.1 mouse_genomes_project 13 118487826 118488223 + MGP_BALBcJ_P0038228 Gm21762 protein_coding protein_coding MGP_BALBcJ_T0100635.1 MGP_BALBcJ_G0038671.1 mouse_genomes_project 13 21873323 21873445 - Gm22358 snoRNA snoRNA MGP_BALBcJ_T0036637.1 MGP_BALBcJ_G0020380.1 mouse_genomes_project 13 30200949 30214808 + MGP_BALBcJ_P0036637 Serpinb6b protein_coding protein_coding MGP_BALBcJ_T0036638.1 MGP_BALBcJ_G0020380.1 mouse_genomes_project 13 30201184 30214803 + MGP_BALBcJ_P0036638 Serpinb6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036639.1 MGP_BALBcJ_G0020380.1 mouse_genomes_project 13 30201243 30214803 + Serpinb6b protein_coding processed_transcript MGP_BALBcJ_T0036889.1 MGP_BALBcJ_G0020474.1 mouse_genomes_project 13 45970040 45971330 + MGP_BALBcJ_P0036889 A830005F24Rik protein_coding protein_coding MGP_BALBcJ_T0102186.1 MGP_BALBcJ_G0040002.1 mouse_genomes_project 13 19071561 19072093 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036792.1 MGP_BALBcJ_G0020443.1 mouse_genomes_project 13 39418599 39555209 + MGP_BALBcJ_P0036792 Hivep1 protein_coding protein_coding MGP_BALBcJ_T0036434.1 MGP_BALBcJ_G0020276.1 mouse_genomes_project 13 20026950 20027853 + MGP_BALBcJ_P0036434 Vmn1r215 protein_coding protein_coding MGP_BALBcJ_T0037237.1 MGP_BALBcJ_G0020582.1 mouse_genomes_project 13 56117868 56122919 - MGP_BALBcJ_P0037237 2210016F16Rik protein_coding protein_coding MGP_BALBcJ_T0036551.1 MGP_BALBcJ_G0020335.1 mouse_genomes_project 13 22315982 22334025 - MGP_BALBcJ_P0036551 Nrsn1 protein_coding protein_coding MGP_BALBcJ_T0036552.1 MGP_BALBcJ_G0020335.1 mouse_genomes_project 13 22316134 22326628 - MGP_BALBcJ_P0036552 Nrsn1 protein_coding protein_coding MGP_BALBcJ_T0036553.1 MGP_BALBcJ_G0020335.1 mouse_genomes_project 13 22317350 22326625 - Nrsn1 protein_coding processed_transcript MGP_BALBcJ_T0036554.1 MGP_BALBcJ_G0020335.1 mouse_genomes_project 13 22333977 22334445 - Nrsn1 protein_coding processed_transcript MGP_BALBcJ_T0037902.1 MGP_BALBcJ_G0020820.1 mouse_genomes_project 13 97247741 97250180 - MGP_BALBcJ_P0037902 Tmem174 protein_coding protein_coding MGP_BALBcJ_T0036983.1 MGP_BALBcJ_G0020506.1 mouse_genomes_project 13 50126387 50152847 - MGP_BALBcJ_P0036983 Diras2 protein_coding protein_coding MGP_BALBcJ_T0037444.1 MGP_BALBcJ_G0020658.1 mouse_genomes_project 13 65472486 65513836 - MGP_BALBcJ_P0037444 Gm28044 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037445.1 MGP_BALBcJ_G0020658.1 mouse_genomes_project 13 65474669 65502389 - Gm28044 protein_coding processed_transcript MGP_BALBcJ_T0036192.1 MGP_BALBcJ_G0020160.1 mouse_genomes_project 13 5569018 5578705 + MGP_BALBcJ_P0036192 protein_coding protein_coding MGP_BALBcJ_T0036294.1 MGP_BALBcJ_G0020195.1 mouse_genomes_project 13 14551938 14647585 - MGP_BALBcJ_P0036294 Cdk13 protein_coding protein_coding MGP_BALBcJ_T0036295.1 MGP_BALBcJ_G0020195.1 mouse_genomes_project 13 14554046 14647145 - MGP_BALBcJ_P0036295 Cdk13 protein_coding unknown_likely_coding MGP_BALBcJ_T0012896.1 MGP_BALBcJ_G0010993.1 mouse_genomes_project 13 31244541 31245907 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036782.1 MGP_BALBcJ_G0020437.1 mouse_genomes_project 13 38595009 38618650 + MGP_BALBcJ_P0036782 Smim13 protein_coding protein_coding MGP_BALBcJ_T0036650.1 MGP_BALBcJ_G0020388.1 mouse_genomes_project 13 30512362 30663519 + MGP_BALBcJ_P0036650 Serpinb9g protein_coding protein_coding MGP_BALBcJ_T0038022.1 MGP_BALBcJ_G0020854.1 mouse_genomes_project 13 102775054 102797484 + MGP_BALBcJ_P0038022 Sgtb protein_coding protein_coding MGP_BALBcJ_T0038023.1 MGP_BALBcJ_G0020854.1 mouse_genomes_project 13 102775077 102807456 + MGP_BALBcJ_P0038023 Sgtb protein_coding protein_coding MGP_BALBcJ_T0037758.1 MGP_BALBcJ_G0020764.1 mouse_genomes_project 13 90831524 90865794 + MGP_BALBcJ_P0037758 Dhfr protein_coding protein_coding MGP_BALBcJ_T0036570.1 MGP_BALBcJ_G0020346.1 mouse_genomes_project 13 24472698 24480114 - MGP_BALBcJ_P0036570 Prl2b1 protein_coding protein_coding MGP_BALBcJ_T0036571.1 MGP_BALBcJ_G0020346.1 mouse_genomes_project 13 24472698 24480114 - MGP_BALBcJ_P0036571 Prl2b1 protein_coding protein_coding MGP_BALBcJ_T0038200.1 MGP_BALBcJ_G0020919.1 mouse_genomes_project 13 118050488 118140962 - MGP_BALBcJ_P0038200 Nnt protein_coding protein_coding MGP_BALBcJ_T0038201.1 MGP_BALBcJ_G0020919.1 mouse_genomes_project 13 118050488 118140962 - MGP_BALBcJ_P0038201 Nnt protein_coding protein_coding MGP_BALBcJ_T0038202.1 MGP_BALBcJ_G0020919.1 mouse_genomes_project 13 118050562 118140909 - MGP_BALBcJ_P0038202 Nnt protein_coding unknown_likely_coding MGP_BALBcJ_T0038203.1 MGP_BALBcJ_G0020919.1 mouse_genomes_project 13 118068790 118140962 - MGP_BALBcJ_P0038203 Nnt protein_coding protein_coding MGP_BALBcJ_T0038204.1 MGP_BALBcJ_G0020919.1 mouse_genomes_project 13 118119481 118140962 - Nnt protein_coding processed_transcript MGP_BALBcJ_T0038205.1 MGP_BALBcJ_G0020919.1 mouse_genomes_project 13 118125272 118140962 - Nnt protein_coding processed_transcript MGP_BALBcJ_T0038221.1 MGP_BALBcJ_G0020928.1 mouse_genomes_project 13 118407581 118435487 - MGP_BALBcJ_P0038221 Zfp131 protein_coding protein_coding MGP_BALBcJ_T0038222.1 MGP_BALBcJ_G0020928.1 mouse_genomes_project 13 118407581 118435487 - MGP_BALBcJ_P0038222 Zfp131 protein_coding protein_coding MGP_BALBcJ_T0100653.1 MGP_BALBcJ_G0038689.1 mouse_genomes_project 13 74186419 74186549 + Gm23127 snoRNA snoRNA MGP_BALBcJ_T0036786.1 MGP_BALBcJ_G0020440.1 mouse_genomes_project 13 38953747 38988844 + MGP_BALBcJ_P0036786 Tmem170b protein_coding protein_coding MGP_BALBcJ_T0036152.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3173964 3183163 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036153.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3173964 3239609 - MGP_BALBcJ_P0036153 Pfkp protein_coding protein_coding MGP_BALBcJ_T0036154.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3175378 3239557 - MGP_BALBcJ_P0036154 Pfkp protein_coding protein_coding MGP_BALBcJ_T0036155.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3175664 3181292 - MGP_BALBcJ_P0036155 Pfkp protein_coding protein_coding MGP_BALBcJ_T0036156.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3176669 3192076 - MGP_BALBcJ_P0036156 Pfkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036157.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3176669 3192957 - MGP_BALBcJ_P0036157 Pfkp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036158.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3180084 3182822 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036159.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3187169 3239557 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036160.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3192491 3197008 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036161.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3196597 3239557 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036162.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3205368 3212902 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036163.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3209910 3239557 - Pfkp protein_coding retained_intron MGP_BALBcJ_T0036164.1 MGP_BALBcJ_G0020154.1 mouse_genomes_project 13 3211739 3227478 - MGP_BALBcJ_P0036164 Pfkp protein_coding protein_coding MGP_BALBcJ_T0036853.1 MGP_BALBcJ_G0020465.1 mouse_genomes_project 13 44087960 44136452 - MGP_BALBcJ_P0036853 Nup153 protein_coding protein_coding MGP_BALBcJ_T0036854.1 MGP_BALBcJ_G0020465.1 mouse_genomes_project 13 44089130 44090008 - Nup153 protein_coding retained_intron MGP_BALBcJ_T0036855.1 MGP_BALBcJ_G0020465.1 mouse_genomes_project 13 44090900 44092070 - Nup153 protein_coding retained_intron MGP_BALBcJ_T0036856.1 MGP_BALBcJ_G0020465.1 mouse_genomes_project 13 44107668 44110150 - Nup153 protein_coding retained_intron MGP_BALBcJ_T0036857.1 MGP_BALBcJ_G0020465.1 mouse_genomes_project 13 44118402 44125737 - Nup153 protein_coding processed_transcript MGP_BALBcJ_T0009912.1 MGP_BALBcJ_G0008037.1 mouse_genomes_project 13 49377375 49378299 + miRNA miRNA MGP_BALBcJ_T0037426.1 MGP_BALBcJ_G0020648.1 mouse_genomes_project 13 65177610 65198429 - MGP_BALBcJ_P0037426 Zfp712 protein_coding protein_coding MGP_BALBcJ_T0038195.1 MGP_BALBcJ_G0020916.1 mouse_genomes_project 13 117151141 117158362 - MGP_BALBcJ_P0038195 Mrps30 protein_coding protein_coding MGP_BALBcJ_T0036958.1 MGP_BALBcJ_G0020499.1 mouse_genomes_project 13 49017646 49031875 + MGP_BALBcJ_P0036958 S1pr3 protein_coding protein_coding MGP_BALBcJ_T0037608.1 MGP_BALBcJ_G0020736.1 mouse_genomes_project 13 76588427 76596320 - MGP_BALBcJ_P0037608 Nr2f1 protein_coding protein_coding MGP_BALBcJ_T0037609.1 MGP_BALBcJ_G0020736.1 mouse_genomes_project 13 76588952 76597212 - MGP_BALBcJ_P0037609 Nr2f1 protein_coding protein_coding MGP_BALBcJ_T0037610.1 MGP_BALBcJ_G0020736.1 mouse_genomes_project 13 76589013 76595654 - MGP_BALBcJ_P0037610 Nr2f1 protein_coding protein_coding MGP_BALBcJ_T0037611.1 MGP_BALBcJ_G0020736.1 mouse_genomes_project 13 76589152 76589724 - Nr2f1 protein_coding processed_transcript MGP_BALBcJ_T0009928.1 MGP_BALBcJ_G0008053.1 mouse_genomes_project 13 61387898 61387966 + Mir24-1 miRNA miRNA MGP_BALBcJ_T0099360.1 MGP_BALBcJ_G0037396.1 mouse_genomes_project 13 14652103 14652327 - Gm24018 snRNA snRNA MGP_BALBcJ_T0036431.1 MGP_BALBcJ_G0020273.1 mouse_genomes_project 13 19864393 19865467 - MGP_BALBcJ_P0036431 Vmn1r212 protein_coding protein_coding MGP_BALBcJ_T0037321.1 MGP_BALBcJ_G0020604.1 mouse_genomes_project 13 58657866 58663662 - MGP_BALBcJ_P0037321 Tpbpb protein_coding protein_coding MGP_BALBcJ_T0102226.1 MGP_BALBcJ_G0040042.1 mouse_genomes_project 13 31002750 31003549 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006617.1 MGP_BALBcJ_G0005475.1 mouse_genomes_project 13 110027636 110034466 - Gm6270 lincRNA lincRNA MGP_BALBcJ_T0006596.1 MGP_BALBcJ_G0005459.1 mouse_genomes_project 13 92617914 92620585 - Gm15907 lincRNA lincRNA MGP_BALBcJ_T0006537.1 MGP_BALBcJ_G0005421.1 mouse_genomes_project 13 41508756 41512741 + Gm5083 lincRNA lincRNA MGP_BALBcJ_T0006538.1 MGP_BALBcJ_G0005421.1 mouse_genomes_project 13 41508883 41512741 + Gm5083 lincRNA lincRNA MGP_BALBcJ_T0036446.1 MGP_BALBcJ_G0020285.1 mouse_genomes_project 13 20484634 20493518 - MGP_BALBcJ_P0036446 Btn1a1 protein_coding protein_coding MGP_BALBcJ_T0036447.1 MGP_BALBcJ_G0020285.1 mouse_genomes_project 13 20491390 20493544 - MGP_BALBcJ_P0036447 Btn1a1 protein_coding protein_coding MGP_BALBcJ_T0038146.1 MGP_BALBcJ_G0020889.1 mouse_genomes_project 13 111331719 111411027 + MGP_BALBcJ_P0038146 Slc38a9 protein_coding protein_coding MGP_BALBcJ_T0009935.1 MGP_BALBcJ_G0008060.1 mouse_genomes_project 13 92264540 92264601 + Mir5624 miRNA miRNA MGP_BALBcJ_T0099378.1 MGP_BALBcJ_G0037414.1 mouse_genomes_project 13 54042677 54042781 - Gm24716 snRNA snRNA MGP_BALBcJ_T0011329.1 MGP_BALBcJ_G0009454.1 mouse_genomes_project 13 40434390 40434653 - Gm26086 misc_RNA misc_RNA MGP_BALBcJ_T0036556.1 MGP_BALBcJ_G0020337.1 mouse_genomes_project 13 24113289 24120651 + MGP_BALBcJ_P0036556 Prl protein_coding protein_coding MGP_BALBcJ_T0012856.1 MGP_BALBcJ_G0010953.1 mouse_genomes_project 13 18415717 18416392 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038223.1 MGP_BALBcJ_G0020929.1 mouse_genomes_project 13 118480634 118481416 - MGP_BALBcJ_P0038223 protein_coding protein_coding MGP_BALBcJ_T0036412.1 MGP_BALBcJ_G0020254.1 mouse_genomes_project 13 18965798 18966528 - MGP_BALBcJ_P0036412 Hist1h4i protein_coding protein_coding MGP_BALBcJ_T0036793.1 MGP_BALBcJ_G0020444.1 mouse_genomes_project 13 39672613 39679315 + MGP_BALBcJ_P0036793 Edn1 protein_coding protein_coding MGP_BALBcJ_T0011341.1 MGP_BALBcJ_G0009466.1 mouse_genomes_project 13 107174120 107174376 - Gm27572 misc_RNA misc_RNA MGP_BALBcJ_T0037233.1 MGP_BALBcJ_G0020579.1 mouse_genomes_project 13 55907846 55947536 - MGP_BALBcJ_P0037233 Ubqln1 protein_coding protein_coding MGP_BALBcJ_T0037234.1 MGP_BALBcJ_G0020579.1 mouse_genomes_project 13 55907846 55947536 - MGP_BALBcJ_P0037234 Ubqln1 protein_coding protein_coding MGP_BALBcJ_T0098321.1 MGP_BALBcJ_G0036375.1 mouse_genomes_project 13 44423399 44423918 + pseudogene pseudogene MGP_BALBcJ_T0037916.1 MGP_BALBcJ_G0020828.1 mouse_genomes_project 13 98031012 98128734 - MGP_BALBcJ_P0037916 Map1b protein_coding protein_coding MGP_BALBcJ_T0099367.1 MGP_BALBcJ_G0037403.1 mouse_genomes_project 13 28969831 28969939 - Gm25186 snRNA snRNA MGP_BALBcJ_T0003428.1 MGP_BALBcJ_G0003145.1 mouse_genomes_project 13 39160356 39161369 + 1700061E18Rik antisense antisense MGP_BALBcJ_T0006551.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51039192 51046898 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006552.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51039208 51104549 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006553.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51039224 51105648 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006554.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51039632 51040874 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006555.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51039826 51052418 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006556.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51039826 51047967 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006557.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51040870 51047983 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0006558.1 MGP_BALBcJ_G0005431.1 mouse_genomes_project 13 51050232 51052899 + Gm2762 lincRNA lincRNA MGP_BALBcJ_T0037638.1 MGP_BALBcJ_G0020742.1 mouse_genomes_project 13 80225166 80239020 + MGP_BALBcJ_P0037638 Cetn3 protein_coding protein_coding MGP_BALBcJ_T0036432.1 MGP_BALBcJ_G0020274.1 mouse_genomes_project 13 19953219 19954374 + MGP_BALBcJ_P0036432 Vmn1r213 protein_coding protein_coding MGP_BALBcJ_T0038151.1 MGP_BALBcJ_G0020893.1 mouse_genomes_project 13 111660980 111663963 + MGP_BALBcJ_P0038151 Ccno protein_coding protein_coding MGP_BALBcJ_T0038062.1 MGP_BALBcJ_G0020868.1 mouse_genomes_project 13 105592100 105604069 + MGP_BALBcJ_P0038062 Dimt1 protein_coding protein_coding MGP_BALBcJ_T0037404.1 MGP_BALBcJ_G0020639.1 mouse_genomes_project 13 63231252 63232179 + MGP_BALBcJ_P0037404 Olfr466 protein_coding protein_coding MGP_BALBcJ_T0037989.1 MGP_BALBcJ_G0020849.1 mouse_genomes_project 13 101371244 101385353 + MGP_BALBcJ_P0037989 Cd180 protein_coding protein_coding MGP_BALBcJ_T0037990.1 MGP_BALBcJ_G0020849.1 mouse_genomes_project 13 101371251 101382231 + MGP_BALBcJ_P0037990 Cd180 protein_coding protein_coding MGP_BALBcJ_T0037991.1 MGP_BALBcJ_G0020849.1 mouse_genomes_project 13 101371259 101383035 + MGP_BALBcJ_P0037991 Cd180 protein_coding protein_coding MGP_BALBcJ_T0037992.1 MGP_BALBcJ_G0020849.1 mouse_genomes_project 13 101371265 101418250 + MGP_BALBcJ_P0037992 Cd180 protein_coding protein_coding MGP_BALBcJ_T0037993.1 MGP_BALBcJ_G0020849.1 mouse_genomes_project 13 101371297 101418125 + MGP_BALBcJ_P0037993 Cd180 protein_coding protein_coding MGP_BALBcJ_T0012935.1 MGP_BALBcJ_G0011032.1 mouse_genomes_project 13 99685394 99686362 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099371.1 MGP_BALBcJ_G0037407.1 mouse_genomes_project 13 38925323 38925489 - Gm24819 snRNA snRNA MGP_BALBcJ_T0099374.1 MGP_BALBcJ_G0037410.1 mouse_genomes_project 13 41256299 41256407 + Gm23117 snRNA snRNA MGP_BALBcJ_T0012853.1 MGP_BALBcJ_G0010950.1 mouse_genomes_project 13 17624973 17625973 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036372.1 MGP_BALBcJ_G0020229.1 mouse_genomes_project 13 18489005 18497820 - MGP_BALBcJ_P0036372 Olfr1364 protein_coding protein_coding MGP_BALBcJ_T0036373.1 MGP_BALBcJ_G0020229.1 mouse_genomes_project 13 18489005 18489950 - MGP_BALBcJ_P0036373 Olfr1364 protein_coding protein_coding MGP_BALBcJ_T0012865.1 MGP_BALBcJ_G0010962.1 mouse_genomes_project 13 19733230 19733662 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006582.1 MGP_BALBcJ_G0005451.1 mouse_genomes_project 13 79387185 79568551 + 9330111N05Rik lincRNA lincRNA MGP_BALBcJ_T0006583.1 MGP_BALBcJ_G0005451.1 mouse_genomes_project 13 79388371 79524092 + 9330111N05Rik lincRNA lincRNA MGP_BALBcJ_T0006584.1 MGP_BALBcJ_G0005451.1 mouse_genomes_project 13 79405373 79570991 + 9330111N05Rik lincRNA lincRNA MGP_BALBcJ_T0011322.1 MGP_BALBcJ_G0009447.1 mouse_genomes_project 13 6244554 6244802 - Gm23496 misc_RNA misc_RNA MGP_BALBcJ_T0000880.1 MGP_BALBcJ_G0000811.1 mouse_genomes_project 13 77714520 77714982 - TEC TEC MGP_BALBcJ_T0037496.1 MGP_BALBcJ_G0020688.1 mouse_genomes_project 13 68121163 68127344 + MGP_BALBcJ_P0037496 Med10 protein_coding protein_coding MGP_BALBcJ_T0038214.1 MGP_BALBcJ_G0020922.1 mouse_genomes_project 13 118221739 118222862 - MGP_BALBcJ_P0038214 3110070M22Rik protein_coding protein_coding MGP_BALBcJ_T0036224.1 MGP_BALBcJ_G0020165.1 mouse_genomes_project 13 6488316 6984247 - MGP_BALBcJ_P0036224 Chrm3 protein_coding protein_coding MGP_BALBcJ_T0036225.1 MGP_BALBcJ_G0020165.1 mouse_genomes_project 13 6490059 6491829 - MGP_BALBcJ_P0036225 Chrm3 protein_coding protein_coding MGP_BALBcJ_T0036226.1 MGP_BALBcJ_G0020165.1 mouse_genomes_project 13 6837002 6983966 - Chrm3 protein_coding processed_transcript MGP_BALBcJ_T0037257.1 MGP_BALBcJ_G0020585.1 mouse_genomes_project 13 56289173 56301941 - MGP_BALBcJ_P0037257 Slc28a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037258.1 MGP_BALBcJ_G0020585.1 mouse_genomes_project 13 56297003 56354245 - MGP_BALBcJ_P0037258 Slc28a3 protein_coding protein_coding MGP_BALBcJ_T0037259.1 MGP_BALBcJ_G0020585.1 mouse_genomes_project 13 56325697 56354245 - MGP_BALBcJ_P0037259 Slc28a3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037260.1 MGP_BALBcJ_G0020585.1 mouse_genomes_project 13 56330088 56354237 - Slc28a3 protein_coding retained_intron MGP_BALBcJ_T0038217.1 MGP_BALBcJ_G0020925.1 mouse_genomes_project 13 118272415 118302693 + MGP_BALBcJ_P0038217 Ccl28 protein_coding protein_coding MGP_BALBcJ_T0102197.1 MGP_BALBcJ_G0040013.1 mouse_genomes_project 13 19707353 19707897 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012870.1 MGP_BALBcJ_G0010967.1 mouse_genomes_project 13 21246042 21246641 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003455.1 MGP_BALBcJ_G0003162.1 mouse_genomes_project 13 72014271 72024294 + Slc6a19os antisense antisense MGP_BALBcJ_T0003456.1 MGP_BALBcJ_G0003162.1 mouse_genomes_project 13 72018159 72023355 + Slc6a19os antisense antisense MGP_BALBcJ_T0037013.1 MGP_BALBcJ_G0020517.1 mouse_genomes_project 13 52015483 52027855 + MGP_BALBcJ_P0037013 Cplx2 protein_coding protein_coding MGP_BALBcJ_T0006588.1 MGP_BALBcJ_G0005454.1 mouse_genomes_project 13 82176537 82185487 - Gm26803 lincRNA lincRNA MGP_BALBcJ_T0037887.1 MGP_BALBcJ_G0020813.1 mouse_genomes_project 13 96491200 96799366 - MGP_BALBcJ_P0037887 Arhgef28 protein_coding protein_coding MGP_BALBcJ_T0038053.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105433772 105581738 - MGP_BALBcJ_P0038053 Ipo11 protein_coding protein_coding MGP_BALBcJ_T0038054.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105433772 105569631 - MGP_BALBcJ_P0038054 Ipo11 protein_coding protein_coding MGP_BALBcJ_T0038055.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105433780 105491224 - MGP_BALBcJ_P0038055 Ipo11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038056.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105451404 105502226 - Ipo11 protein_coding retained_intron MGP_BALBcJ_T0038057.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105451509 105480039 - Ipo11 protein_coding retained_intron MGP_BALBcJ_T0038058.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105477431 105491059 - Ipo11 protein_coding processed_transcript MGP_BALBcJ_T0038059.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105477433 105480027 - Ipo11 protein_coding processed_transcript MGP_BALBcJ_T0038060.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105485880 105492260 - Ipo11 protein_coding retained_intron MGP_BALBcJ_T0038061.1 MGP_BALBcJ_G0020867.1 mouse_genomes_project 13 105504849 105581725 - Ipo11 protein_coding retained_intron MGP_BALBcJ_T0036396.1 MGP_BALBcJ_G0020247.1 mouse_genomes_project 13 18746242 18746644 - MGP_BALBcJ_P0036396 Hist1h4m protein_coding protein_coding MGP_BALBcJ_T0037509.1 MGP_BALBcJ_G0020694.1 mouse_genomes_project 13 71568910 71578229 + MGP_BALBcJ_P0037509 Irx4 protein_coding protein_coding MGP_BALBcJ_T0037510.1 MGP_BALBcJ_G0020694.1 mouse_genomes_project 13 71568928 71578229 + MGP_BALBcJ_P0037510 Irx4 protein_coding protein_coding MGP_BALBcJ_T0037070.1 MGP_BALBcJ_G0020529.1 mouse_genomes_project 13 52424113 52431850 - MGP_BALBcJ_P0037070 Sncb protein_coding protein_coding MGP_BALBcJ_T0037071.1 MGP_BALBcJ_G0020529.1 mouse_genomes_project 13 52424633 52431352 - MGP_BALBcJ_P0037071 Sncb protein_coding protein_coding MGP_BALBcJ_T0037072.1 MGP_BALBcJ_G0020529.1 mouse_genomes_project 13 52424680 52428318 - Sncb protein_coding retained_intron MGP_BALBcJ_T0037073.1 MGP_BALBcJ_G0020529.1 mouse_genomes_project 13 52430309 52431747 - Sncb protein_coding retained_intron MGP_BALBcJ_T0037955.1 MGP_BALBcJ_G0020838.1 mouse_genomes_project 13 99262023 99284739 - MGP_BALBcJ_P0037955 Marveld2 protein_coding protein_coding MGP_BALBcJ_T0037956.1 MGP_BALBcJ_G0020838.1 mouse_genomes_project 13 99262023 99284712 - MGP_BALBcJ_P0037956 Marveld2 protein_coding protein_coding MGP_BALBcJ_T0037957.1 MGP_BALBcJ_G0020838.1 mouse_genomes_project 13 99263296 99284679 - MGP_BALBcJ_P0037957 Marveld2 protein_coding protein_coding MGP_BALBcJ_T0006530.1 MGP_BALBcJ_G0005414.1 mouse_genomes_project 13 34711642 34713628 - Gm29459 lincRNA lincRNA MGP_BALBcJ_T0006564.1 MGP_BALBcJ_G0005437.1 mouse_genomes_project 13 53530131 53530867 - Gm28760 lincRNA lincRNA MGP_BALBcJ_T0006565.1 MGP_BALBcJ_G0005437.1 mouse_genomes_project 13 53530131 53530864 - Gm28760 lincRNA lincRNA MGP_BALBcJ_T0000879.1 MGP_BALBcJ_G0000810.1 mouse_genomes_project 13 69406270 69409573 - TEC TEC MGP_BALBcJ_T0037720.1 MGP_BALBcJ_G0020755.1 mouse_genomes_project 13 89407505 89409325 + MGP_BALBcJ_P0037720 Rps23 protein_coding protein_coding MGP_BALBcJ_T0006566.1 MGP_BALBcJ_G0005438.1 mouse_genomes_project 13 53921982 53943649 - 4930550C17Rik lincRNA lincRNA MGP_BALBcJ_T0102209.1 MGP_BALBcJ_G0040025.1 mouse_genomes_project 13 20151393 20152285 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036494.1 MGP_BALBcJ_G0020320.1 mouse_genomes_project 13 20985101 20985485 - MGP_BALBcJ_P0036494 Hist1h2ba protein_coding protein_coding MGP_BALBcJ_T0100638.1 MGP_BALBcJ_G0038674.1 mouse_genomes_project 13 32498405 32498536 - Gm22674 snoRNA snoRNA MGP_BALBcJ_T0009932.1 MGP_BALBcJ_G0008057.1 mouse_genomes_project 13 85876393 85876503 + Gm24935 miRNA miRNA MGP_BALBcJ_T0011338.1 MGP_BALBcJ_G0009463.1 mouse_genomes_project 13 97652975 97653228 - Gm24733 misc_RNA misc_RNA MGP_BALBcJ_T0000871.1 MGP_BALBcJ_G0000802.1 mouse_genomes_project 13 36546794 36547157 + TEC TEC MGP_BALBcJ_T0102208.1 MGP_BALBcJ_G0040024.1 mouse_genomes_project 13 20054599 20055077 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036652.1 MGP_BALBcJ_G0020390.1 mouse_genomes_project 13 30922414 30932870 + MGP_BALBcJ_P0036652 Serpinb6d protein_coding protein_coding MGP_BALBcJ_T0036297.1 MGP_BALBcJ_G0020197.1 mouse_genomes_project 13 14837353 14844065 - MGP_BALBcJ_P0036297 Yae1d1 protein_coding protein_coding MGP_BALBcJ_T0036383.1 MGP_BALBcJ_G0020237.1 mouse_genomes_project 13 18644301 18645058 + MGP_BALBcJ_P0036383 Hist1h4j protein_coding protein_coding MGP_BALBcJ_T0036557.1 MGP_BALBcJ_G0020338.1 mouse_genomes_project 13 24154453 24172322 + MGP_BALBcJ_P0036557 Prl3d1 protein_coding protein_coding MGP_BALBcJ_T0009895.1 MGP_BALBcJ_G0008020.1 mouse_genomes_project 13 18747540 20788309 + miRNA miRNA MGP_BALBcJ_T0002493.1 MGP_BALBcJ_G0002400.1 mouse_genomes_project 13 16280217 16280278 + MGP_BALBcJ_P0002493 Trgj4 TR_J_gene TR_J_gene MGP_BALBcJ_T0012904.1 MGP_BALBcJ_G0011001.1 mouse_genomes_project 13 59295629 59295707 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012917.1 MGP_BALBcJ_G0011014.1 mouse_genomes_project 13 72144493 72144936 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037433.1 MGP_BALBcJ_G0020651.1 mouse_genomes_project 13 65234349 65251718 - MGP_BALBcJ_P0037433 Rslcan18 protein_coding protein_coding MGP_BALBcJ_T0037435.1 MGP_BALBcJ_G0020651.1 mouse_genomes_project 13 65248710 65253946 - Rslcan18 protein_coding retained_intron MGP_BALBcJ_T0036928.1 MGP_BALBcJ_G0020489.1 mouse_genomes_project 13 47058679 47067753 + MGP_BALBcJ_P0036928 Omd protein_coding protein_coding MGP_BALBcJ_T0012845.1 MGP_BALBcJ_G0010942.1 mouse_genomes_project 13 831265 831556 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006504.1 MGP_BALBcJ_G0005398.1 mouse_genomes_project 13 26173968 26182534 + Gm26735 lincRNA lincRNA MGP_BALBcJ_T0006613.1 MGP_BALBcJ_G0005472.1 mouse_genomes_project 13 100083375 100148915 + lincRNA lincRNA MGP_BALBcJ_T0003483.1 MGP_BALBcJ_G0003175.1 mouse_genomes_project 13 101441451 101445699 + antisense antisense MGP_BALBcJ_T0012847.1 MGP_BALBcJ_G0010944.1 mouse_genomes_project 13 5772128 5772279 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037231.1 MGP_BALBcJ_G0020578.1 mouse_genomes_project 13 55889121 55896407 + MGP_BALBcJ_P0037231 Idnk protein_coding protein_coding MGP_BALBcJ_T0037232.1 MGP_BALBcJ_G0020578.1 mouse_genomes_project 13 55889121 55896407 + MGP_BALBcJ_P0037232 Idnk protein_coding protein_coding MGP_BALBcJ_T0036959.1 MGP_BALBcJ_G0020500.1 mouse_genomes_project 13 49040102 49174469 - MGP_BALBcJ_P0036959 Shc3 protein_coding protein_coding MGP_BALBcJ_T0012846.1 MGP_BALBcJ_G0010943.1 mouse_genomes_project 13 5556087 5556729 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006621.1 MGP_BALBcJ_G0005479.1 mouse_genomes_project 13 110527435 110531407 + Gm15326 lincRNA lincRNA MGP_BALBcJ_T0006622.1 MGP_BALBcJ_G0005479.1 mouse_genomes_project 13 110530609 110534200 + Gm15326 lincRNA lincRNA MGP_BALBcJ_T0101852.1 MGP_BALBcJ_G0039769.1 mouse_genomes_project 13 20667905 20668225 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0000886.1 MGP_BALBcJ_G0000817.1 mouse_genomes_project 13 89107672 89108085 + TEC TEC MGP_BALBcJ_T0102227.1 MGP_BALBcJ_G0040043.1 mouse_genomes_project 13 31002750 31003567 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036306.1 MGP_BALBcJ_G0020200.1 mouse_genomes_project 13 15807367 16005630 + MGP_BALBcJ_P0036306 Amph protein_coding protein_coding MGP_BALBcJ_T0036307.1 MGP_BALBcJ_G0020200.1 mouse_genomes_project 13 15807387 16005633 + MGP_BALBcJ_P0036307 Amph protein_coding protein_coding MGP_BALBcJ_T0036308.1 MGP_BALBcJ_G0020200.1 mouse_genomes_project 13 15807414 15955758 + Amph protein_coding retained_intron MGP_BALBcJ_T0036309.1 MGP_BALBcJ_G0020200.1 mouse_genomes_project 13 15971795 15973702 + Amph protein_coding retained_intron MGP_BALBcJ_T0036310.1 MGP_BALBcJ_G0020200.1 mouse_genomes_project 13 15973466 15997099 + Amph protein_coding processed_transcript MGP_BALBcJ_T0006514.1 MGP_BALBcJ_G0005405.1 mouse_genomes_project 13 28565011 28567202 - Gm11374 lincRNA lincRNA MGP_BALBcJ_T0036724.1 MGP_BALBcJ_G0020413.1 mouse_genomes_project 13 33982689 33992936 - MGP_BALBcJ_P0036724 Nrn1 protein_coding protein_coding MGP_BALBcJ_T0036725.1 MGP_BALBcJ_G0020413.1 mouse_genomes_project 13 33983522 33987677 - MGP_BALBcJ_P0036725 Nrn1 protein_coding protein_coding MGP_BALBcJ_T0102213.1 MGP_BALBcJ_G0040029.1 mouse_genomes_project 13 20269558 20270130 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006579.1 MGP_BALBcJ_G0005448.1 mouse_genomes_project 13 77704861 77717885 + Gm29318 lincRNA lincRNA MGP_BALBcJ_T0037002.1 MGP_BALBcJ_G0020509.1 mouse_genomes_project 13 50601467 50615257 - MGP_BALBcJ_P0037002 Nfil3 protein_coding protein_coding MGP_BALBcJ_T0038038.1 MGP_BALBcJ_G0020860.1 mouse_genomes_project 13 103304851 103479221 - MGP_BALBcJ_P0038038 Cwc27 protein_coding protein_coding MGP_BALBcJ_T0038039.1 MGP_BALBcJ_G0020860.1 mouse_genomes_project 13 103415720 103454953 - Cwc27 protein_coding processed_transcript MGP_BALBcJ_T0038040.1 MGP_BALBcJ_G0020860.1 mouse_genomes_project 13 103452817 103454988 - Cwc27 protein_coding processed_transcript MGP_BALBcJ_T0038042.1 MGP_BALBcJ_G0020860.1 mouse_genomes_project 13 103470035 103479410 - MGP_BALBcJ_P0038042 Cwc27 protein_coding protein_coding MGP_BALBcJ_T0003427.1 MGP_BALBcJ_G0003144.1 mouse_genomes_project 13 38069507 38076844 + Gm26688 antisense antisense MGP_BALBcJ_T0000867.1 MGP_BALBcJ_G0000799.1 mouse_genomes_project 13 16331298 16333624 - TEC TEC MGP_BALBcJ_T0012925.1 MGP_BALBcJ_G0011022.1 mouse_genomes_project 13 83163510 83164250 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102200.1 MGP_BALBcJ_G0040016.1 mouse_genomes_project 13 19854876 19855168 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037521.1 MGP_BALBcJ_G0020699.1 mouse_genomes_project 13 71848138 71891098 + MGP_BALBcJ_P0037521 Slc6a3 protein_coding protein_coding MGP_BALBcJ_T0037338.1 MGP_BALBcJ_G0020619.1 mouse_genomes_project 13 60956220 60979350 - MGP_BALBcJ_P0037338 Fbp1 protein_coding protein_coding MGP_BALBcJ_T0037339.1 MGP_BALBcJ_G0020619.1 mouse_genomes_project 13 60956233 60964190 - MGP_BALBcJ_P0037339 Fbp1 protein_coding protein_coding MGP_BALBcJ_T0037340.1 MGP_BALBcJ_G0020619.1 mouse_genomes_project 13 60964150 60979196 - MGP_BALBcJ_P0037340 Fbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006500.1 MGP_BALBcJ_G0005395.1 mouse_genomes_project 13 22993499 23004259 - Gm11351 lincRNA lincRNA MGP_BALBcJ_T0037773.1 MGP_BALBcJ_G0020773.1 mouse_genomes_project 13 91627256 91672090 - MGP_BALBcJ_P0037773 Papd4 protein_coding protein_coding MGP_BALBcJ_T0003423.1 MGP_BALBcJ_G0003141.1 mouse_genomes_project 13 27165281 27167260 + Gm11365 antisense antisense MGP_BALBcJ_T0102193.1 MGP_BALBcJ_G0040009.1 mouse_genomes_project 13 19444730 19445095 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037144.1 MGP_BALBcJ_G0020548.1 mouse_genomes_project 13 53150469 53159367 + MGP_BALBcJ_P0037144 Prr7 protein_coding protein_coding MGP_BALBcJ_T0003412.1 MGP_BALBcJ_G0003132.1 mouse_genomes_project 13 18682480 18683824 + Gm11274 antisense antisense MGP_BALBcJ_T0037174.1 MGP_BALBcJ_G0020556.1 mouse_genomes_project 13 53310741 53319940 + MGP_BALBcJ_P0037174 Caml protein_coding protein_coding MGP_BALBcJ_T0037175.1 MGP_BALBcJ_G0020556.1 mouse_genomes_project 13 53310934 53312985 + Caml protein_coding retained_intron MGP_BALBcJ_T0037176.1 MGP_BALBcJ_G0020556.1 mouse_genomes_project 13 53315816 53319940 + Caml protein_coding retained_intron MGP_BALBcJ_T0006609.1 MGP_BALBcJ_G0005468.1 mouse_genomes_project 13 97714212 97721032 + Gm807 lincRNA lincRNA MGP_BALBcJ_T0036476.1 MGP_BALBcJ_G0020308.1 mouse_genomes_project 13 20787009 20787498 - MGP_BALBcJ_P0036476 Hist1h3c protein_coding protein_coding MGP_BALBcJ_T0036251.1 MGP_BALBcJ_G0020179.1 mouse_genomes_project 13 10349628 10398182 + MGP_BALBcJ_P0036251 Nid1 protein_coding protein_coding MGP_BALBcJ_T0038014.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102491951 102595243 - MGP_BALBcJ_P0038014 Erbin protein_coding protein_coding MGP_BALBcJ_T0038015.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102491955 102567716 - MGP_BALBcJ_P0038015 Erbin protein_coding protein_coding MGP_BALBcJ_T0038016.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102491955 102595024 - MGP_BALBcJ_P0038016 Erbin protein_coding protein_coding MGP_BALBcJ_T0038017.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102492771 102595024 - MGP_BALBcJ_P0038017 Erbin protein_coding protein_coding MGP_BALBcJ_T0038018.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102492771 102595024 - MGP_BALBcJ_P0038018 Erbin protein_coding protein_coding MGP_BALBcJ_T0038019.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102492771 102595024 - MGP_BALBcJ_P0038019 Erbin protein_coding protein_coding MGP_BALBcJ_T0038020.1 MGP_BALBcJ_G0020852.1 mouse_genomes_project 13 102516305 102595243 - Erbin protein_coding retained_intron MGP_BALBcJ_T0036426.1 MGP_BALBcJ_G0020268.1 mouse_genomes_project 13 19509626 19510535 + MGP_BALBcJ_P0036426 Vmn1r204 protein_coding protein_coding MGP_BALBcJ_T0036622.1 MGP_BALBcJ_G0020373.1 mouse_genomes_project 13 29037903 29041856 + MGP_BALBcJ_P0036622 Foxc1 protein_coding protein_coding MGP_BALBcJ_T0036817.1 MGP_BALBcJ_G0020452.1 mouse_genomes_project 13 40993606 41050684 + MGP_BALBcJ_P0036817 Rnf182 protein_coding protein_coding MGP_BALBcJ_T0036818.1 MGP_BALBcJ_G0020452.1 mouse_genomes_project 13 40993879 41047793 + MGP_BALBcJ_P0036818 Rnf182 protein_coding protein_coding MGP_BALBcJ_T0036532.1 MGP_BALBcJ_G0020327.1 mouse_genomes_project 13 21863533 21875890 + MGP_BALBcJ_P0036532 BC005537 protein_coding protein_coding MGP_BALBcJ_T0036533.1 MGP_BALBcJ_G0020327.1 mouse_genomes_project 13 21863896 21874537 + MGP_BALBcJ_P0036533 BC005537 protein_coding protein_coding MGP_BALBcJ_T0038072.1 MGP_BALBcJ_G0020871.1 mouse_genomes_project 13 106385029 106553432 - MGP_BALBcJ_P0038072 Zswim6 protein_coding protein_coding MGP_BALBcJ_T0036611.1 MGP_BALBcJ_G0020365.1 mouse_genomes_project 13 27884099 27937918 + MGP_BALBcJ_P0036611 Dusp22 protein_coding protein_coding MGP_BALBcJ_T0036612.1 MGP_BALBcJ_G0020365.1 mouse_genomes_project 13 27884161 27932820 + MGP_BALBcJ_P0036612 Dusp22 protein_coding protein_coding MGP_BALBcJ_T0036613.1 MGP_BALBcJ_G0020365.1 mouse_genomes_project 13 27884210 27935591 + MGP_BALBcJ_P0036613 Dusp22 protein_coding protein_coding MGP_BALBcJ_T0100649.1 MGP_BALBcJ_G0038685.1 mouse_genomes_project 13 56057876 56058018 + Gm24284 snoRNA snoRNA MGP_BALBcJ_T0038193.1 MGP_BALBcJ_G0020914.1 mouse_genomes_project 13 115958479 116010313 + MGP_BALBcJ_P0038193 Emb protein_coding protein_coding MGP_BALBcJ_T0037482.1 MGP_BALBcJ_G0020682.1 mouse_genomes_project 13 66932600 66949248 + MGP_BALBcJ_P0037482 1700001L19Rik protein_coding protein_coding MGP_BALBcJ_T0037565.1 MGP_BALBcJ_G0020717.1 mouse_genomes_project 13 72672277 72687708 + MGP_BALBcJ_P0037565 Ccdc127 protein_coding protein_coding MGP_BALBcJ_T0037566.1 MGP_BALBcJ_G0020717.1 mouse_genomes_project 13 72672285 72684626 + MGP_BALBcJ_P0037566 Ccdc127 protein_coding protein_coding MGP_BALBcJ_T0037567.1 MGP_BALBcJ_G0020717.1 mouse_genomes_project 13 72672312 72683010 + MGP_BALBcJ_P0037567 Ccdc127 protein_coding protein_coding MGP_BALBcJ_T0037568.1 MGP_BALBcJ_G0020717.1 mouse_genomes_project 13 72672313 72682620 + MGP_BALBcJ_P0037568 Ccdc127 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037569.1 MGP_BALBcJ_G0020717.1 mouse_genomes_project 13 72672333 72678968 + MGP_BALBcJ_P0037569 Ccdc127 protein_coding protein_coding MGP_BALBcJ_T0037441.1 MGP_BALBcJ_G0020656.1 mouse_genomes_project 13 65448273 65460942 - MGP_BALBcJ_P0037441 Zfp457 protein_coding protein_coding MGP_BALBcJ_T0037442.1 MGP_BALBcJ_G0020656.1 mouse_genomes_project 13 65460215 65460997 - Zfp457 protein_coding retained_intron MGP_BALBcJ_T0036989.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50466582 50562632 - MGP_BALBcJ_P0036989 Auh protein_coding protein_coding MGP_BALBcJ_T0036990.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50466582 50552237 - MGP_BALBcJ_P0036990 Auh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036991.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50472332 50562429 - MGP_BALBcJ_P0036991 Auh protein_coding protein_coding MGP_BALBcJ_T0036992.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50518000 50562619 - Auh protein_coding retained_intron MGP_BALBcJ_T0036993.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50527847 50562623 - MGP_BALBcJ_P0036993 Auh protein_coding protein_coding MGP_BALBcJ_T0036994.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50528623 50556870 - Auh protein_coding processed_transcript MGP_BALBcJ_T0036995.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50539329 50562625 - MGP_BALBcJ_P0036995 Auh protein_coding protein_coding MGP_BALBcJ_T0036996.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50541179 50556849 - Auh protein_coding processed_transcript MGP_BALBcJ_T0036997.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50541190 50552273 - Auh protein_coding processed_transcript MGP_BALBcJ_T0036998.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50542493 50562652 - MGP_BALBcJ_P0036998 Auh protein_coding protein_coding MGP_BALBcJ_T0036999.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50545356 50556873 - Auh protein_coding processed_transcript MGP_BALBcJ_T0037000.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50551780 50556865 - Auh protein_coding retained_intron MGP_BALBcJ_T0037001.1 MGP_BALBcJ_G0020508.1 mouse_genomes_project 13 50561458 50562623 - Auh protein_coding processed_transcript MGP_BALBcJ_T0002481.1 MGP_BALBcJ_G0002390.1 mouse_genomes_project 13 16282623 16290868 + MGP_BALBcJ_P0002481 Tcrg-C4 TR_C_gene TR_C_gene MGP_BALBcJ_T0038196.1 MGP_BALBcJ_G0020917.1 mouse_genomes_project 13 117157733 117159236 + MGP_BALBcJ_P0038196 B430218F22Rik protein_coding protein_coding MGP_BALBcJ_T0037414.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65053531 65063232 - MGP_BALBcJ_P0037414 Mterf3 protein_coding protein_coding MGP_BALBcJ_T0037416.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65058719 65078782 - MGP_BALBcJ_P0037416 Mterf3 protein_coding protein_coding MGP_BALBcJ_T0037417.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65058727 65078761 - MGP_BALBcJ_P0037417 Mterf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037418.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65058838 65066264 - Mterf3 protein_coding processed_transcript MGP_BALBcJ_T0037419.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65063644 65078402 - MGP_BALBcJ_P0037419 Mterf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037420.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65063674 65076096 - MGP_BALBcJ_P0037420 Mterf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037421.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65068680 65078598 - MGP_BALBcJ_P0037421 Mterf3 protein_coding protein_coding MGP_BALBcJ_T0037422.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65074144 65076158 - MGP_BALBcJ_P0037422 Mterf3 protein_coding protein_coding MGP_BALBcJ_T0037423.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65075866 65078732 - MGP_BALBcJ_P0037423 Mterf3 protein_coding protein_coding MGP_BALBcJ_T0037424.1 MGP_BALBcJ_G0020645.1 mouse_genomes_project 13 65076880 65078735 - Mterf3 protein_coding processed_transcript MGP_BALBcJ_T0036751.1 MGP_BALBcJ_G0020422.1 mouse_genomes_project 13 35622798 35776590 + MGP_BALBcJ_P0036751 Bmp6 protein_coding protein_coding MGP_BALBcJ_T0036451.1 MGP_BALBcJ_G0020287.1 mouse_genomes_project 13 20558429 20558902 + MGP_BALBcJ_P0036451 Hist1h4h protein_coding protein_coding MGP_BALBcJ_T0006619.1 MGP_BALBcJ_G0005477.1 mouse_genomes_project 13 110506655 110508947 - Gm15325 lincRNA lincRNA MGP_BALBcJ_T0037637.1 MGP_BALBcJ_G0020741.1 mouse_genomes_project 13 80149833 80194673 + MGP_BALBcJ_P0037637 Mblac2 protein_coding protein_coding MGP_BALBcJ_T0037834.1 MGP_BALBcJ_G0020793.1 mouse_genomes_project 13 94025919 94039081 - MGP_BALBcJ_P0037834 F2rl1 protein_coding protein_coding MGP_BALBcJ_T0036117.1 MGP_BALBcJ_G0020135.1 mouse_genomes_project 13 376978 378404 - MGP_BALBcJ_P0036117 Calml3 protein_coding protein_coding MGP_BALBcJ_T0037721.1 MGP_BALBcJ_G0020756.1 mouse_genomes_project 13 89422683 89709598 - MGP_BALBcJ_P0037721 Atg10 protein_coding protein_coding MGP_BALBcJ_T0036128.1 MGP_BALBcJ_G0020142.1 mouse_genomes_project 13 708094 726076 - MGP_BALBcJ_P0036128 Akr1c18 protein_coding protein_coding MGP_BALBcJ_T0036129.1 MGP_BALBcJ_G0020142.1 mouse_genomes_project 13 708094 726102 - MGP_BALBcJ_P0036129 Akr1c18 protein_coding protein_coding MGP_BALBcJ_T0038171.1 MGP_BALBcJ_G0020905.1 mouse_genomes_project 13 112968001 113075430 - MGP_BALBcJ_P0038171 Ndufs4 protein_coding protein_coding MGP_BALBcJ_T0037473.1 MGP_BALBcJ_G0020676.1 mouse_genomes_project 13 66062524 66078542 + MGP_BALBcJ_P0037473 Zfp493 protein_coding protein_coding MGP_BALBcJ_T0037474.1 MGP_BALBcJ_G0020676.1 mouse_genomes_project 13 66062524 66075784 + MGP_BALBcJ_P0037474 Zfp493 protein_coding protein_coding MGP_BALBcJ_T0037475.1 MGP_BALBcJ_G0020676.1 mouse_genomes_project 13 66071796 66076624 + Zfp493 protein_coding retained_intron MGP_BALBcJ_T0036820.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42115406 42118243 + Jarid2 protein_coding processed_transcript MGP_BALBcJ_T0036821.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42115467 42234649 + MGP_BALBcJ_P0036821 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036822.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42115727 42210103 + MGP_BALBcJ_P0036822 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036823.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42116706 42307846 + MGP_BALBcJ_P0036823 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036824.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42116755 42308734 + MGP_BALBcJ_P0036824 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036825.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42116770 42291039 + MGP_BALBcJ_P0036825 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036826.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42116791 42262057 + Jarid2 protein_coding processed_transcript MGP_BALBcJ_T0036827.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42117940 42309382 + MGP_BALBcJ_P0036827 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036828.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42117956 42209996 + MGP_BALBcJ_P0036828 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036829.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42118037 42272614 + Jarid2 protein_coding retained_intron MGP_BALBcJ_T0036830.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42118039 42309379 + Jarid2 protein_coding retained_intron MGP_BALBcJ_T0036831.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42118266 42272334 + MGP_BALBcJ_P0036831 Jarid2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036832.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42118527 42262048 + Jarid2 protein_coding processed_transcript MGP_BALBcJ_T0036833.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42120928 42262020 + Jarid2 protein_coding processed_transcript MGP_BALBcJ_T0036834.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42227108 42302057 + MGP_BALBcJ_P0036834 Jarid2 protein_coding protein_coding MGP_BALBcJ_T0036835.1 MGP_BALBcJ_G0020454.1 mouse_genomes_project 13 42227200 42284262 + MGP_BALBcJ_P0036835 Jarid2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037815.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93533820 93761575 - MGP_BALBcJ_P0037815 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037816.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93533825 93543621 - MGP_BALBcJ_P0037816 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037817.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93533871 93734026 - MGP_BALBcJ_P0037817 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037818.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93534696 93555430 - Pde8b protein_coding processed_transcript MGP_BALBcJ_T0037819.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93535469 93761405 - MGP_BALBcJ_P0037819 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037820.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93535486 93733773 - MGP_BALBcJ_P0037820 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037821.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93535486 93733773 - MGP_BALBcJ_P0037821 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037822.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93535486 93733773 - MGP_BALBcJ_P0037822 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037823.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93543313 93734515 - MGP_BALBcJ_P0037823 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037824.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93552385 93761513 - MGP_BALBcJ_P0037824 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037825.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93552831 93562285 - Pde8b protein_coding retained_intron MGP_BALBcJ_T0037826.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93599190 93734026 - Pde8b protein_coding retained_intron MGP_BALBcJ_T0037827.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93610040 93761554 - MGP_BALBcJ_P0037827 Pde8b protein_coding protein_coding MGP_BALBcJ_T0037828.1 MGP_BALBcJ_G0020788.1 mouse_genomes_project 13 93613821 93697218 - Pde8b protein_coding processed_transcript MGP_BALBcJ_T0036465.1 MGP_BALBcJ_G0020301.1 mouse_genomes_project 13 20627262 20668270 - MGP_BALBcJ_P0036465 Hist1h2be protein_coding protein_coding MGP_BALBcJ_T0036466.1 MGP_BALBcJ_G0020301.1 mouse_genomes_project 13 20627263 20668300 - MGP_BALBcJ_P0036466 Hist1h2be protein_coding protein_coding MGP_BALBcJ_T0036467.1 MGP_BALBcJ_G0020301.1 mouse_genomes_project 13 20666155 20668254 - Hist1h2be protein_coding processed_transcript MGP_BALBcJ_T0037484.1 MGP_BALBcJ_G0020684.1 mouse_genomes_project 13 67803977 67841347 - MGP_BALBcJ_P0037484 Papd7 protein_coding protein_coding MGP_BALBcJ_T0037485.1 MGP_BALBcJ_G0020684.1 mouse_genomes_project 13 67803980 67840664 - MGP_BALBcJ_P0037485 Papd7 protein_coding protein_coding MGP_BALBcJ_T0012924.1 MGP_BALBcJ_G0011021.1 mouse_genomes_project 13 82799091 82800056 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017320.1 MGP_BALBcJ_G0015193.1 mouse_genomes_project 13 57528913 57530887 + Etohd2 processed_transcript processed_transcript MGP_BALBcJ_T0017321.1 MGP_BALBcJ_G0015193.1 mouse_genomes_project 13 57528914 57532628 + Etohd2 processed_transcript processed_transcript MGP_BALBcJ_T0036879.1 MGP_BALBcJ_G0020471.1 mouse_genomes_project 13 44535747 44664084 + MGP_BALBcJ_P0036879 Rnf144b protein_coding protein_coding MGP_BALBcJ_T0036880.1 MGP_BALBcJ_G0020471.1 mouse_genomes_project 13 44607735 44664084 + MGP_BALBcJ_P0036880 Rnf144b protein_coding protein_coding MGP_BALBcJ_T0038170.1 MGP_BALBcJ_G0020904.1 mouse_genomes_project 13 112471611 112836403 + MGP_BALBcJ_P0038170 Arl15 protein_coding protein_coding MGP_BALBcJ_T0037303.1 MGP_BALBcJ_G0020592.1 mouse_genomes_project 13 57468610 57475482 + MGP_BALBcJ_P0037303 Spata31d1b protein_coding protein_coding MGP_BALBcJ_T0037137.1 MGP_BALBcJ_G0020544.1 mouse_genomes_project 13 53078771 53092569 + MGP_BALBcJ_P0037137 Slc34a1 protein_coding protein_coding MGP_BALBcJ_T0036587.1 MGP_BALBcJ_G0020356.1 mouse_genomes_project 13 24929190 24936266 + MGP_BALBcJ_P0036587 Prl2a1 protein_coding protein_coding MGP_BALBcJ_T0036358.1 MGP_BALBcJ_G0020220.1 mouse_genomes_project 13 18337858 18361385 - MGP_BALBcJ_P0036358 Zscan26 protein_coding unknown_likely_coding MGP_BALBcJ_T0036359.1 MGP_BALBcJ_G0020220.1 mouse_genomes_project 13 18337862 18365655 - MGP_BALBcJ_P0036359 Zscan26 protein_coding protein_coding MGP_BALBcJ_T0036360.1 MGP_BALBcJ_G0020220.1 mouse_genomes_project 13 18340128 18365658 - MGP_BALBcJ_P0036360 Zscan26 protein_coding protein_coding MGP_BALBcJ_T0036868.1 MGP_BALBcJ_G0020469.1 mouse_genomes_project 13 44456316 44497651 + MGP_BALBcJ_P0036868 Kdm1b protein_coding protein_coding MGP_BALBcJ_T0036869.1 MGP_BALBcJ_G0020469.1 mouse_genomes_project 13 44456387 44466821 + MGP_BALBcJ_P0036869 Kdm1b protein_coding protein_coding MGP_BALBcJ_T0036870.1 MGP_BALBcJ_G0020469.1 mouse_genomes_project 13 44456430 44497659 + MGP_BALBcJ_P0036870 Kdm1b protein_coding protein_coding MGP_BALBcJ_T0036871.1 MGP_BALBcJ_G0020469.1 mouse_genomes_project 13 44477209 44485337 + Kdm1b protein_coding retained_intron MGP_BALBcJ_T0036872.1 MGP_BALBcJ_G0020469.1 mouse_genomes_project 13 44479524 44497664 + Kdm1b protein_coding processed_transcript MGP_BALBcJ_T0037180.1 MGP_BALBcJ_G0020558.1 mouse_genomes_project 13 53385686 53395857 + MGP_BALBcJ_P0037180 B230219D22Rik protein_coding protein_coding MGP_BALBcJ_T0099361.1 MGP_BALBcJ_G0037397.1 mouse_genomes_project 13 17761344 17761468 + Gm25605 snRNA snRNA MGP_BALBcJ_T0012909.1 MGP_BALBcJ_G0011006.1 mouse_genomes_project 13 62634574 62635950 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000869.1 MGP_BALBcJ_G0000801.1 mouse_genomes_project 13 35418882 35420201 - TEC TEC MGP_BALBcJ_T0000870.1 MGP_BALBcJ_G0000801.1 mouse_genomes_project 13 35419841 35420201 - TEC TEC MGP_BALBcJ_T0036813.1 MGP_BALBcJ_G0020448.1 mouse_genomes_project 13 40745911 40768724 + MGP_BALBcJ_P0036813 Sirt5 protein_coding unknown_likely_coding MGP_BALBcJ_T0036433.1 MGP_BALBcJ_G0020275.1 mouse_genomes_project 13 19976660 19979986 + MGP_BALBcJ_P0036433 Vmn1r214 protein_coding protein_coding MGP_BALBcJ_T0036332.1 MGP_BALBcJ_G0020210.1 mouse_genomes_project 13 18020276 18037297 + MGP_BALBcJ_P0036332 protein_coding protein_coding MGP_BALBcJ_T0036389.1 MGP_BALBcJ_G0020243.1 mouse_genomes_project 13 18700638 18702391 + MGP_BALBcJ_P0036389 Hist1h2bp protein_coding protein_coding MGP_BALBcJ_T0036394.1 MGP_BALBcJ_G0020243.1 mouse_genomes_project 13 18700685 18701154 + MGP_BALBcJ_P0036394 Hist1h2bp protein_coding protein_coding MGP_BALBcJ_T0099380.1 MGP_BALBcJ_G0037416.1 mouse_genomes_project 13 60880786 60880873 + Gm25448 snRNA snRNA MGP_BALBcJ_T0100660.1 MGP_BALBcJ_G0038696.1 mouse_genomes_project 13 84497684 84497744 - Gm22574 snoRNA snoRNA MGP_BALBcJ_T0037833.1 MGP_BALBcJ_G0020792.1 mouse_genomes_project 13 93990695 93992059 - MGP_BALBcJ_P0037833 S100z protein_coding protein_coding MGP_BALBcJ_T0037838.1 MGP_BALBcJ_G0020797.1 mouse_genomes_project 13 94476486 94656463 - MGP_BALBcJ_P0037838 Sv2c protein_coding protein_coding MGP_BALBcJ_T0037839.1 MGP_BALBcJ_G0020797.1 mouse_genomes_project 13 94482914 94507658 - Sv2c protein_coding processed_transcript MGP_BALBcJ_T0037840.1 MGP_BALBcJ_G0020797.1 mouse_genomes_project 13 94498639 94612506 - MGP_BALBcJ_P0037840 Sv2c protein_coding protein_coding MGP_BALBcJ_T0037543.1 MGP_BALBcJ_G0020709.1 mouse_genomes_project 13 72310362 72310548 - MGP_BALBcJ_P0037543 Gm10126 protein_coding protein_coding MGP_BALBcJ_T0036436.1 MGP_BALBcJ_G0020278.1 mouse_genomes_project 13 20064133 20065030 - MGP_BALBcJ_P0036436 Vmn1r217 protein_coding protein_coding MGP_BALBcJ_T0102214.1 MGP_BALBcJ_G0040030.1 mouse_genomes_project 13 20770461 20772017 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0017324.1 MGP_BALBcJ_G0015196.1 mouse_genomes_project 13 88211879 88318166 + Gm4117 processed_transcript processed_transcript MGP_BALBcJ_T0017325.1 MGP_BALBcJ_G0015196.1 mouse_genomes_project 13 88211883 88363517 + Gm4117 processed_transcript processed_transcript MGP_BALBcJ_T0006560.1 MGP_BALBcJ_G0005433.1 mouse_genomes_project 13 52043529 52043772 - Gm16248 lincRNA lincRNA MGP_BALBcJ_T0037524.1 MGP_BALBcJ_G0020702.1 mouse_genomes_project 13 71975421 71992058 - MGP_BALBcJ_P0037524 Slc6a18 protein_coding protein_coding MGP_BALBcJ_T0037525.1 MGP_BALBcJ_G0020702.1 mouse_genomes_project 13 71975421 71992058 - MGP_BALBcJ_P0037525 Slc6a18 protein_coding protein_coding MGP_BALBcJ_T0037526.1 MGP_BALBcJ_G0020702.1 mouse_genomes_project 13 71975421 71992058 - MGP_BALBcJ_P0037526 Slc6a18 protein_coding protein_coding MGP_BALBcJ_T0037527.1 MGP_BALBcJ_G0020702.1 mouse_genomes_project 13 71978092 71991964 - MGP_BALBcJ_P0037527 Slc6a18 protein_coding unknown_likely_coding MGP_BALBcJ_T0037886.1 MGP_BALBcJ_G0020812.1 mouse_genomes_project 13 96310024 96311107 - MGP_BALBcJ_P0037886 protein_coding protein_coding MGP_BALBcJ_T0000866.1 MGP_BALBcJ_G0000798.1 mouse_genomes_project 13 14865016 14871874 + TEC TEC MGP_BALBcJ_T0009891.1 MGP_BALBcJ_G0008016.1 mouse_genomes_project 13 14587616 14587747 + Mir466i miRNA miRNA MGP_BALBcJ_T0037552.1 MGP_BALBcJ_G0020714.1 mouse_genomes_project 13 72535444 72604537 - MGP_BALBcJ_P0037552 Ahrr protein_coding protein_coding MGP_BALBcJ_T0037553.1 MGP_BALBcJ_G0020714.1 mouse_genomes_project 13 72537854 72578995 - Ahrr protein_coding retained_intron MGP_BALBcJ_T0037554.1 MGP_BALBcJ_G0020714.1 mouse_genomes_project 13 72544816 72582122 - Ahrr protein_coding processed_transcript MGP_BALBcJ_T0037555.1 MGP_BALBcJ_G0020714.1 mouse_genomes_project 13 72546607 72582878 - Ahrr protein_coding processed_transcript MGP_BALBcJ_T0036685.1 MGP_BALBcJ_G0020400.1 mouse_genomes_project 13 31406373 31571854 - MGP_BALBcJ_P0036685 Slc22a23 protein_coding protein_coding MGP_BALBcJ_T0036686.1 MGP_BALBcJ_G0020400.1 mouse_genomes_project 13 31410083 31420747 - Slc22a23 protein_coding retained_intron MGP_BALBcJ_T0036687.1 MGP_BALBcJ_G0020400.1 mouse_genomes_project 13 31431234 31571652 - MGP_BALBcJ_P0036687 Slc22a23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036688.1 MGP_BALBcJ_G0020400.1 mouse_genomes_project 13 31448327 31571260 - Slc22a23 protein_coding processed_transcript MGP_BALBcJ_T0037751.1 MGP_BALBcJ_G0020763.1 mouse_genomes_project 13 90781200 90782399 + MGP_BALBcJ_P0037751 Gm20379 protein_coding protein_coding MGP_BALBcJ_T0036642.1 MGP_BALBcJ_G0020382.1 mouse_genomes_project 13 30264516 30278645 + MGP_BALBcJ_P0036642 Serpinb9b protein_coding protein_coding MGP_BALBcJ_T0036125.1 MGP_BALBcJ_G0020141.1 mouse_genomes_project 13 634288 665158 + MGP_BALBcJ_P0036125 Akr1c14 protein_coding protein_coding MGP_BALBcJ_T0036126.1 MGP_BALBcJ_G0020141.1 mouse_genomes_project 13 644841 665149 + MGP_BALBcJ_P0036126 Akr1c14 protein_coding protein_coding MGP_BALBcJ_T0036127.1 MGP_BALBcJ_G0020141.1 mouse_genomes_project 13 652993 663732 + Akr1c14 protein_coding processed_transcript MGP_BALBcJ_T0037415.1 MGP_BALBcJ_G0020646.1 mouse_genomes_project 13 65054484 65054905 + MGP_BALBcJ_P0037415 protein_coding protein_coding MGP_BALBcJ_T0009930.1 MGP_BALBcJ_G0008055.1 mouse_genomes_project 13 81143538 81143597 - Mir3961 miRNA miRNA MGP_BALBcJ_T0036745.1 MGP_BALBcJ_G0020419.1 mouse_genomes_project 13 35309233 35333618 + MGP_BALBcJ_P0036745 Riok1 protein_coding protein_coding MGP_BALBcJ_T0037033.1 MGP_BALBcJ_G0020521.1 mouse_genomes_project 13 52231681 52237799 + MGP_BALBcJ_P0037033 Arl10 protein_coding protein_coding MGP_BALBcJ_T0037034.1 MGP_BALBcJ_G0020521.1 mouse_genomes_project 13 52231713 52235687 + MGP_BALBcJ_P0037034 Arl10 protein_coding protein_coding MGP_BALBcJ_T0037035.1 MGP_BALBcJ_G0020521.1 mouse_genomes_project 13 52235051 52235580 + Arl10 protein_coding processed_transcript MGP_BALBcJ_T0037036.1 MGP_BALBcJ_G0020521.1 mouse_genomes_project 13 52235482 52236208 + MGP_BALBcJ_P0037036 Arl10 protein_coding protein_coding MGP_BALBcJ_T0099387.1 MGP_BALBcJ_G0037423.1 mouse_genomes_project 13 94628400 94628500 - Gm23955 snRNA snRNA MGP_BALBcJ_T0036464.1 MGP_BALBcJ_G0020300.1 mouse_genomes_project 13 20625118 20625511 + MGP_BALBcJ_P0036464 Hist1h4d protein_coding protein_coding MGP_BALBcJ_T0100630.1 MGP_BALBcJ_G0038666.1 mouse_genomes_project 13 10172364 10172595 + Gm25483 snoRNA snoRNA MGP_BALBcJ_T0000887.1 MGP_BALBcJ_G0000818.1 mouse_genomes_project 13 93114307 93114955 + TEC TEC MGP_BALBcJ_T0012877.1 MGP_BALBcJ_G0010974.1 mouse_genomes_project 13 22647174 22647866 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036481.1 MGP_BALBcJ_G0020313.1 mouse_genomes_project 13 20811476 20812010 - MGP_BALBcJ_P0036481 Hist1h3a protein_coding protein_coding MGP_BALBcJ_T0036405.1 MGP_BALBcJ_G0020251.1 mouse_genomes_project 13 18903201 18910686 + MGP_BALBcJ_P0036405 Pom121l2 protein_coding protein_coding MGP_BALBcJ_T0036406.1 MGP_BALBcJ_G0020251.1 mouse_genomes_project 13 18903527 18906487 + MGP_BALBcJ_P0036406 Pom121l2 protein_coding protein_coding MGP_BALBcJ_T0036248.1 MGP_BALBcJ_G0020177.1 mouse_genomes_project 13 9780254 9795785 - MGP_BALBcJ_P0036248 protein_coding protein_coding MGP_BALBcJ_T0012866.1 MGP_BALBcJ_G0010963.1 mouse_genomes_project 13 20053757 20054221 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037768.1 MGP_BALBcJ_G0020769.1 mouse_genomes_project 13 91089006 91186823 + MGP_BALBcJ_P0037768 Serinc5 protein_coding protein_coding MGP_BALBcJ_T0102218.1 MGP_BALBcJ_G0040034.1 mouse_genomes_project 13 30242257 30242415 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037382.1 MGP_BALBcJ_G0020626.1 mouse_genomes_project 13 62239811 62260196 - MGP_BALBcJ_P0037382 Zfp367 protein_coding protein_coding MGP_BALBcJ_T0037383.1 MGP_BALBcJ_G0020626.1 mouse_genomes_project 13 62242196 62259423 - Zfp367 protein_coding processed_transcript MGP_BALBcJ_T0037384.1 MGP_BALBcJ_G0020626.1 mouse_genomes_project 13 62242323 62257206 - Zfp367 protein_coding processed_transcript MGP_BALBcJ_T0037385.1 MGP_BALBcJ_G0020626.1 mouse_genomes_project 13 62247465 62260196 - MGP_BALBcJ_P0037385 Zfp367 protein_coding protein_coding MGP_BALBcJ_T0098494.1 MGP_BALBcJ_G0036548.1 mouse_genomes_project 13 20722189 20722297 - Gm24991 rRNA rRNA MGP_BALBcJ_T0037917.1 MGP_BALBcJ_G0020829.1 mouse_genomes_project 13 98505203 98507322 - MGP_BALBcJ_P0037917 Cartpt protein_coding protein_coding MGP_BALBcJ_T0036257.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10874219 10913963 - MGP_BALBcJ_P0036257 Tbce protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036258.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10874221 10881777 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036259.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10874221 10877870 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036260.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10874222 10914022 - MGP_BALBcJ_P0036260 Tbce protein_coding protein_coding MGP_BALBcJ_T0036261.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10874223 10914022 - MGP_BALBcJ_P0036261 Tbce protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036262.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10879336 10914005 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036263.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10881461 10886117 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036264.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10881499 10885324 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036265.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10881506 10886110 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036266.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10881514 10885776 - Tbce protein_coding processed_transcript MGP_BALBcJ_T0036267.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10886657 10913996 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036268.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10890624 10913980 - Tbce protein_coding retained_intron MGP_BALBcJ_T0036269.1 MGP_BALBcJ_G0020184.1 mouse_genomes_project 13 10895547 10914001 - Tbce protein_coding retained_intron MGP_BALBcJ_T0100634.1 MGP_BALBcJ_G0038670.1 mouse_genomes_project 13 21367204 21367327 - Gm23340 snoRNA snoRNA MGP_BALBcJ_T0036683.1 MGP_BALBcJ_G0020399.1 mouse_genomes_project 13 31397254 31405381 + MGP_BALBcJ_P0036683 Psmg4 protein_coding protein_coding MGP_BALBcJ_T0036684.1 MGP_BALBcJ_G0020399.1 mouse_genomes_project 13 31397254 31405385 + MGP_BALBcJ_P0036684 Psmg4 protein_coding protein_coding MGP_BALBcJ_T0012881.1 MGP_BALBcJ_G0010978.1 mouse_genomes_project 13 23937813 23938119 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036847.1 MGP_BALBcJ_G0020461.1 mouse_genomes_project 13 43683804 43710487 + MGP_BALBcJ_P0036847 Stmnd1 protein_coding protein_coding MGP_BALBcJ_T0036270.1 MGP_BALBcJ_G0020185.1 mouse_genomes_project 13 10926875 10937829 - MGP_BALBcJ_P0036270 Ggps1 protein_coding protein_coding MGP_BALBcJ_T0036968.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49311614 49407515 - MGP_BALBcJ_P0036968 Sema4d protein_coding protein_coding MGP_BALBcJ_T0036969.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49311614 49407589 - MGP_BALBcJ_P0036969 Sema4d protein_coding protein_coding MGP_BALBcJ_T0036970.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49311618 49345325 - MGP_BALBcJ_P0036970 Sema4d protein_coding protein_coding MGP_BALBcJ_T0036971.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49322059 49324710 - Sema4d protein_coding retained_intron MGP_BALBcJ_T0036972.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49333935 49359773 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036973.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49333935 49359669 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036974.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335507 49363025 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036975.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335554 49365625 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036976.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335574 49367662 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036977.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335597 49367528 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036978.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335624 49359580 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036979.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335673 49389993 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0036980.1 MGP_BALBcJ_G0020504.1 mouse_genomes_project 13 49335706 49407506 - Sema4d protein_coding processed_transcript MGP_BALBcJ_T0012888.1 MGP_BALBcJ_G0010985.1 mouse_genomes_project 13 27413239 27413668 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099369.1 MGP_BALBcJ_G0037405.1 mouse_genomes_project 13 32895332 32895474 + Gm22126 snRNA snRNA MGP_BALBcJ_T0006547.1 MGP_BALBcJ_G0005427.1 mouse_genomes_project 13 45725278 45726737 - A330048O09Rik lincRNA lincRNA MGP_BALBcJ_T0009904.1 MGP_BALBcJ_G0008029.1 mouse_genomes_project 13 25933762 25933855 - Mir6368 miRNA miRNA MGP_BALBcJ_T0009894.1 MGP_BALBcJ_G0008019.1 mouse_genomes_project 13 18630111 18630247 + Gm44357 miRNA miRNA MGP_BALBcJ_T0037898.1 MGP_BALBcJ_G0020817.1 mouse_genomes_project 13 96906569 96913722 - MGP_BALBcJ_P0037898 Btf3 protein_coding protein_coding MGP_BALBcJ_T0037899.1 MGP_BALBcJ_G0020817.1 mouse_genomes_project 13 96909793 96913751 - Btf3 protein_coding retained_intron MGP_BALBcJ_T0037181.1 MGP_BALBcJ_G0020559.1 mouse_genomes_project 13 53406843 53418412 + MGP_BALBcJ_P0037181 Txndc15 protein_coding protein_coding MGP_BALBcJ_T0037392.1 MGP_BALBcJ_G0020630.1 mouse_genomes_project 13 62479526 62486895 - MGP_BALBcJ_P0037392 Ctsl protein_coding protein_coding MGP_BALBcJ_T0102192.1 MGP_BALBcJ_G0040008.1 mouse_genomes_project 13 19440301 19440882 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012887.1 MGP_BALBcJ_G0010984.1 mouse_genomes_project 13 27347176 27347299 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098320.1 MGP_BALBcJ_G0036374.1 mouse_genomes_project 13 26054601 26054841 + pseudogene pseudogene MGP_BALBcJ_T0006624.1 MGP_BALBcJ_G0005481.1 mouse_genomes_project 13 110666524 110678513 + Gm15323 lincRNA lincRNA MGP_BALBcJ_T0036144.1 MGP_BALBcJ_G0020149.1 mouse_genomes_project 13 1183153 1204813 - MGP_BALBcJ_P0036144 Akr1e1 protein_coding protein_coding MGP_BALBcJ_T0036145.1 MGP_BALBcJ_G0020149.1 mouse_genomes_project 13 1184888 1204813 - MGP_BALBcJ_P0036145 Akr1e1 protein_coding protein_coding MGP_BALBcJ_T0036146.1 MGP_BALBcJ_G0020149.1 mouse_genomes_project 13 1193667 1204773 - Akr1e1 protein_coding processed_transcript MGP_BALBcJ_T0011330.1 MGP_BALBcJ_G0009455.1 mouse_genomes_project 13 42675076 42675419 - Gm23755 misc_RNA misc_RNA MGP_BALBcJ_T0038174.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503412 113506237 + Mocs2 protein_coding retained_intron MGP_BALBcJ_T0038175.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503426 113507157 + Mocs2 protein_coding retained_intron MGP_BALBcJ_T0038176.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503436 113514252 + MGP_BALBcJ_P0038176 Mocs2 protein_coding protein_coding MGP_BALBcJ_T0038177.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503438 113514249 + Mocs2 protein_coding retained_intron MGP_BALBcJ_T0038178.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503438 113513917 + MGP_BALBcJ_P0038178 Mocs2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038179.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503445 113510691 + Mocs2 protein_coding retained_intron MGP_BALBcJ_T0038180.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503455 113513787 + MGP_BALBcJ_P0038180 Mocs2 protein_coding protein_coding MGP_BALBcJ_T0038181.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113503462 113513966 + MGP_BALBcJ_P0038181 Mocs2 protein_coding protein_coding MGP_BALBcJ_T0038182.1 MGP_BALBcJ_G0020907.1 mouse_genomes_project 13 113504073 113510399 + MGP_BALBcJ_P0038182 Mocs2 protein_coding protein_coding MGP_BALBcJ_T0037982.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100373161 100462174 - MGP_BALBcJ_P0037982 Pik3r1 protein_coding protein_coding MGP_BALBcJ_T0037983.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100376262 100385401 - MGP_BALBcJ_P0037983 Pik3r1 protein_coding protein_coding MGP_BALBcJ_T0037984.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100380191 100385347 - MGP_BALBcJ_P0037984 Pik3r1 protein_coding protein_coding MGP_BALBcJ_T0037985.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100381649 100387373 - MGP_BALBcJ_P0037985 Pik3r1 protein_coding protein_coding MGP_BALBcJ_T0037986.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100382905 100385114 - Pik3r1 protein_coding retained_intron MGP_BALBcJ_T0037987.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100394221 100394877 - Pik3r1 protein_coding retained_intron MGP_BALBcJ_T0037988.1 MGP_BALBcJ_G0020848.1 mouse_genomes_project 13 100449074 100462170 - Pik3r1 protein_coding retained_intron MGP_BALBcJ_T0037715.1 MGP_BALBcJ_G0020754.1 mouse_genomes_project 13 89364423 89380706 - MGP_BALBcJ_P0037715 Atp6ap1l protein_coding protein_coding MGP_BALBcJ_T0037716.1 MGP_BALBcJ_G0020754.1 mouse_genomes_project 13 89364429 89386198 - MGP_BALBcJ_P0037716 Atp6ap1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037717.1 MGP_BALBcJ_G0020754.1 mouse_genomes_project 13 89364429 89386246 - MGP_BALBcJ_P0037717 Atp6ap1l protein_coding protein_coding MGP_BALBcJ_T0037718.1 MGP_BALBcJ_G0020754.1 mouse_genomes_project 13 89364541 89386373 - MGP_BALBcJ_P0037718 Atp6ap1l protein_coding protein_coding MGP_BALBcJ_T0037719.1 MGP_BALBcJ_G0020754.1 mouse_genomes_project 13 89379663 89386226 - Atp6ap1l protein_coding processed_transcript MGP_BALBcJ_T0036484.1 MGP_BALBcJ_G0020316.1 mouse_genomes_project 13 20857330 20873744 + Slc17a2 protein_coding retained_intron MGP_BALBcJ_T0036485.1 MGP_BALBcJ_G0020316.1 mouse_genomes_project 13 20857364 20875519 + MGP_BALBcJ_P0036485 Slc17a2 protein_coding protein_coding MGP_BALBcJ_T0036486.1 MGP_BALBcJ_G0020316.1 mouse_genomes_project 13 20857382 20873515 + Slc17a2 protein_coding retained_intron MGP_BALBcJ_T0036487.1 MGP_BALBcJ_G0020316.1 mouse_genomes_project 13 20857385 20873096 + MGP_BALBcJ_P0036487 Slc17a2 protein_coding protein_coding MGP_BALBcJ_T0037767.1 MGP_BALBcJ_G0020768.1 mouse_genomes_project 13 91054148 91055750 - MGP_BALBcJ_P0037767 Spz1 protein_coding protein_coding MGP_BALBcJ_T0037139.1 MGP_BALBcJ_G0020546.1 mouse_genomes_project 13 53096086 53109887 - MGP_BALBcJ_P0037139 F12 protein_coding protein_coding MGP_BALBcJ_T0037140.1 MGP_BALBcJ_G0020546.1 mouse_genomes_project 13 53096315 53109873 - MGP_BALBcJ_P0037140 F12 protein_coding protein_coding MGP_BALBcJ_T0038034.1 MGP_BALBcJ_G0020857.1 mouse_genomes_project 13 102869686 102893815 - MGP_BALBcJ_P0038034 protein_coding protein_coding MGP_BALBcJ_T0038030.1 MGP_BALBcJ_G0020856.1 mouse_genomes_project 13 102842900 102867095 + MGP_BALBcJ_P0038030 Trim23 protein_coding protein_coding MGP_BALBcJ_T0038031.1 MGP_BALBcJ_G0020856.1 mouse_genomes_project 13 102842942 102867450 + MGP_BALBcJ_P0038031 Trim23 protein_coding protein_coding MGP_BALBcJ_T0038032.1 MGP_BALBcJ_G0020856.1 mouse_genomes_project 13 102842964 102853821 + MGP_BALBcJ_P0038032 Trim23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038033.1 MGP_BALBcJ_G0020856.1 mouse_genomes_project 13 102843201 102866126 + MGP_BALBcJ_P0038033 Trim23 protein_coding protein_coding MGP_BALBcJ_T0009944.1 MGP_BALBcJ_G0008069.1 mouse_genomes_project 13 111713644 111713724 + Mir449b miRNA miRNA MGP_BALBcJ_T0012928.1 MGP_BALBcJ_G0011025.1 mouse_genomes_project 13 88134309 88134913 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037772.1 MGP_BALBcJ_G0020772.1 mouse_genomes_project 13 91513202 91623907 - MGP_BALBcJ_P0037772 Cmya5 protein_coding protein_coding MGP_BALBcJ_T0012855.1 MGP_BALBcJ_G0010952.1 mouse_genomes_project 13 18276060 18276500 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100664.1 MGP_BALBcJ_G0038700.1 mouse_genomes_project 13 93843607 93843739 + Gm22661 snoRNA snoRNA MGP_BALBcJ_T0012869.1 MGP_BALBcJ_G0010966.1 mouse_genomes_project 13 20974988 20975353 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037324.1 MGP_BALBcJ_G0020607.1 mouse_genomes_project 13 58742248 58747889 - MGP_BALBcJ_P0037324 Ctsj protein_coding protein_coding MGP_BALBcJ_T0009916.1 MGP_BALBcJ_G0008041.1 mouse_genomes_project 13 53194384 53194452 - Mir6945 miRNA miRNA MGP_BALBcJ_T0037341.1 MGP_BALBcJ_G0020620.1 mouse_genomes_project 13 61108119 61386346 + MGP_BALBcJ_P0037341 2010111I01Rik protein_coding protein_coding MGP_BALBcJ_T0037342.1 MGP_BALBcJ_G0020620.1 mouse_genomes_project 13 61108352 61388975 + MGP_BALBcJ_P0037342 2010111I01Rik protein_coding protein_coding MGP_BALBcJ_T0037343.1 MGP_BALBcJ_G0020620.1 mouse_genomes_project 13 61369123 61412987 + MGP_BALBcJ_P0037343 2010111I01Rik protein_coding protein_coding MGP_BALBcJ_T0036647.1 MGP_BALBcJ_G0020385.1 mouse_genomes_project 13 30432273 30442352 + MGP_BALBcJ_P0036647 Serpinb9d protein_coding protein_coding MGP_BALBcJ_T0036234.1 MGP_BALBcJ_G0020169.1 mouse_genomes_project 13 8967219 9010729 + MGP_BALBcJ_P0036234 Heatr1 protein_coding protein_coding MGP_BALBcJ_T0038073.1 MGP_BALBcJ_G0020872.1 mouse_genomes_project 13 106710343 106714507 + MGP_BALBcJ_P0038073 Smim15 protein_coding protein_coding MGP_BALBcJ_T0036619.1 MGP_BALBcJ_G0020370.1 mouse_genomes_project 13 28788942 28792142 - MGP_BALBcJ_P0036619 A530084C06Rik protein_coding protein_coding MGP_BALBcJ_T0036377.1 MGP_BALBcJ_G0020232.1 mouse_genomes_project 13 18566215 18567169 - MGP_BALBcJ_P0036377 Olfr1361 protein_coding protein_coding MGP_BALBcJ_T0036848.1 MGP_BALBcJ_G0020462.1 mouse_genomes_project 13 43821135 43837290 + MGP_BALBcJ_P0036848 Rbm24 protein_coding protein_coding MGP_BALBcJ_T0036693.1 MGP_BALBcJ_G0020402.1 mouse_genomes_project 13 31952373 31965489 + MGP_BALBcJ_P0036693 Fam50b protein_coding protein_coding MGP_BALBcJ_T0102220.1 MGP_BALBcJ_G0040036.1 mouse_genomes_project 13 30391475 30392339 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003434.1 MGP_BALBcJ_G0003151.1 mouse_genomes_project 13 52443214 52448647 - Gm16249 antisense antisense MGP_BALBcJ_T0012894.1 MGP_BALBcJ_G0010991.1 mouse_genomes_project 13 30352859 30353666 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036459.1 MGP_BALBcJ_G0020295.1 mouse_genomes_project 13 20600276 20600736 - MGP_BALBcJ_P0036459 Hist1h2ae protein_coding protein_coding MGP_BALBcJ_T0099359.1 MGP_BALBcJ_G0037395.1 mouse_genomes_project 13 14026499 14026606 + Gm25020 snRNA snRNA MGP_BALBcJ_T0037263.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57202276 57202969 - Agtpbp1 protein_coding processed_transcript MGP_BALBcJ_T0037264.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57202277 57310854 - MGP_BALBcJ_P0037264 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037265.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57202279 57286537 - MGP_BALBcJ_P0037265 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037266.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57202619 57310851 - MGP_BALBcJ_P0037266 Agtpbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037267.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57202619 57310487 - MGP_BALBcJ_P0037267 Agtpbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037268.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57207196 57298010 - MGP_BALBcJ_P0037268 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037269.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57227109 57234559 - Agtpbp1 protein_coding processed_transcript MGP_BALBcJ_T0037270.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57233801 57310860 - MGP_BALBcJ_P0037270 Agtpbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037271.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57246875 57310851 - MGP_BALBcJ_P0037271 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037272.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57246885 57310859 - MGP_BALBcJ_P0037272 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037273.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57264775 57267578 - Agtpbp1 protein_coding processed_transcript MGP_BALBcJ_T0037274.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57265801 57310876 - MGP_BALBcJ_P0037274 Agtpbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037275.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57267589 57287419 - Agtpbp1 protein_coding processed_transcript MGP_BALBcJ_T0037276.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57271105 57310854 - MGP_BALBcJ_P0037276 Agtpbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037277.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57281818 57310844 - MGP_BALBcJ_P0037277 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037278.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57284531 57310912 - MGP_BALBcJ_P0037278 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037279.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57285253 57310865 - MGP_BALBcJ_P0037279 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037280.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57285253 57312338 - MGP_BALBcJ_P0037280 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037281.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57285261 57310484 - MGP_BALBcJ_P0037281 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037282.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57285391 57338422 - MGP_BALBcJ_P0037282 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037283.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57289599 57310602 - MGP_BALBcJ_P0037283 Agtpbp1 protein_coding protein_coding MGP_BALBcJ_T0037284.1 MGP_BALBcJ_G0020587.1 mouse_genomes_project 13 57333408 57338438 - Agtpbp1 protein_coding processed_transcript MGP_BALBcJ_T0036416.1 MGP_BALBcJ_G0020258.1 mouse_genomes_project 13 19140742 19141702 - MGP_BALBcJ_P0036416 Vmn1r193 protein_coding protein_coding MGP_BALBcJ_T0100637.1 MGP_BALBcJ_G0038673.1 mouse_genomes_project 13 28661788 28661913 + Gm23351 snoRNA snoRNA MGP_BALBcJ_T0036558.1 MGP_BALBcJ_G0020339.1 mouse_genomes_project 13 24208706 24215417 + MGP_BALBcJ_P0036558 protein_coding protein_coding MGP_BALBcJ_T0036560.1 MGP_BALBcJ_G0020339.1 mouse_genomes_project 13 24208730 24215481 + MGP_BALBcJ_P0036560 protein_coding protein_coding MGP_BALBcJ_T0003442.1 MGP_BALBcJ_G0003155.1 mouse_genomes_project 13 61420026 61427183 + Gm16133 antisense antisense MGP_BALBcJ_T0003443.1 MGP_BALBcJ_G0003155.1 mouse_genomes_project 13 61420099 61427180 + Gm16133 antisense antisense MGP_BALBcJ_T0037925.1 MGP_BALBcJ_G0020832.1 mouse_genomes_project 13 98724618 98731092 + MGP_BALBcJ_P0037925 Serf1 protein_coding protein_coding MGP_BALBcJ_T0037926.1 MGP_BALBcJ_G0020832.1 mouse_genomes_project 13 98724691 98727863 + MGP_BALBcJ_P0037926 Serf1 protein_coding protein_coding MGP_BALBcJ_T0037927.1 MGP_BALBcJ_G0020832.1 mouse_genomes_project 13 98724761 98731425 + MGP_BALBcJ_P0037927 Serf1 protein_coding protein_coding MGP_BALBcJ_T0037928.1 MGP_BALBcJ_G0020832.1 mouse_genomes_project 13 98724947 98731092 + MGP_BALBcJ_P0037928 Serf1 protein_coding protein_coding MGP_BALBcJ_T0037929.1 MGP_BALBcJ_G0020832.1 mouse_genomes_project 13 98725002 98731085 + MGP_BALBcJ_P0037929 Serf1 protein_coding protein_coding MGP_BALBcJ_T0037184.1 MGP_BALBcJ_G0020561.1 mouse_genomes_project 13 53474013 53502578 + MGP_BALBcJ_P0037184 Catsper3 protein_coding protein_coding MGP_BALBcJ_T0037185.1 MGP_BALBcJ_G0020561.1 mouse_genomes_project 13 53474024 53502609 + MGP_BALBcJ_P0037185 Catsper3 protein_coding protein_coding MGP_BALBcJ_T0098323.1 MGP_BALBcJ_G0036377.1 mouse_genomes_project 13 89706060 89706487 + pseudogene pseudogene MGP_BALBcJ_T0037428.1 MGP_BALBcJ_G0020650.1 mouse_genomes_project 13 65206995 65235630 - protein_coding processed_transcript MGP_BALBcJ_T0037429.1 MGP_BALBcJ_G0020650.1 mouse_genomes_project 13 65206995 65246245 - MGP_BALBcJ_P0037429 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037430.1 MGP_BALBcJ_G0020650.1 mouse_genomes_project 13 65206996 65235715 - MGP_BALBcJ_P0037430 protein_coding protein_coding MGP_BALBcJ_T0037432.1 MGP_BALBcJ_G0020650.1 mouse_genomes_project 13 65211535 65235715 - protein_coding processed_transcript MGP_BALBcJ_T0037434.1 MGP_BALBcJ_G0020650.1 mouse_genomes_project 13 65243104 65246300 - protein_coding processed_transcript MGP_BALBcJ_T0038127.1 MGP_BALBcJ_G0020884.1 mouse_genomes_project 13 110398798 110463445 - MGP_BALBcJ_P0038127 Map3k1 protein_coding protein_coding MGP_BALBcJ_T0038128.1 MGP_BALBcJ_G0020884.1 mouse_genomes_project 13 110403491 110406069 - Map3k1 protein_coding retained_intron MGP_BALBcJ_T0038129.1 MGP_BALBcJ_G0020884.1 mouse_genomes_project 13 110408270 110409397 - Map3k1 protein_coding retained_intron MGP_BALBcJ_T0038130.1 MGP_BALBcJ_G0020884.1 mouse_genomes_project 13 110422319 110423264 - Map3k1 protein_coding processed_transcript MGP_BALBcJ_T0038131.1 MGP_BALBcJ_G0020884.1 mouse_genomes_project 13 110422694 110462871 - MGP_BALBcJ_P0038131 Map3k1 protein_coding protein_coding MGP_BALBcJ_T0003420.1 MGP_BALBcJ_G0003139.1 mouse_genomes_project 13 21808975 21814222 + 1700016G14Rik antisense antisense MGP_BALBcJ_T0003458.1 MGP_BALBcJ_G0003164.1 mouse_genomes_project 13 76598802 76635749 + antisense antisense MGP_BALBcJ_T0003459.1 MGP_BALBcJ_G0003164.1 mouse_genomes_project 13 76601288 76634729 + antisense antisense MGP_BALBcJ_T0003460.1 MGP_BALBcJ_G0003164.1 mouse_genomes_project 13 76601678 76636580 + antisense antisense MGP_BALBcJ_T0003461.1 MGP_BALBcJ_G0003164.1 mouse_genomes_project 13 76602340 76631475 + antisense antisense MGP_BALBcJ_T0003462.1 MGP_BALBcJ_G0003164.1 mouse_genomes_project 13 76602574 76672835 + antisense antisense MGP_BALBcJ_T0102215.1 MGP_BALBcJ_G0040031.1 mouse_genomes_project 13 24417847 24420893 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036967.1 MGP_BALBcJ_G0020503.1 mouse_genomes_project 13 49292875 49311410 - MGP_BALBcJ_P0036967 Gm15440 protein_coding protein_coding MGP_BALBcJ_T0036461.1 MGP_BALBcJ_G0020297.1 mouse_genomes_project 13 20604275 20604840 - MGP_BALBcJ_P0036461 Hist1h2bf protein_coding protein_coding MGP_BALBcJ_T0036399.1 MGP_BALBcJ_G0020250.1 mouse_genomes_project 13 18867383 18882585 + MGP_BALBcJ_P0036399 Zfp184 protein_coding protein_coding MGP_BALBcJ_T0036400.1 MGP_BALBcJ_G0020250.1 mouse_genomes_project 13 18867401 18882869 + MGP_BALBcJ_P0036400 Zfp184 protein_coding protein_coding MGP_BALBcJ_T0036401.1 MGP_BALBcJ_G0020250.1 mouse_genomes_project 13 18867401 18882703 + MGP_BALBcJ_P0036401 Zfp184 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036402.1 MGP_BALBcJ_G0020250.1 mouse_genomes_project 13 18867426 18872619 + MGP_BALBcJ_P0036402 Zfp184 protein_coding protein_coding MGP_BALBcJ_T0036403.1 MGP_BALBcJ_G0020250.1 mouse_genomes_project 13 18868082 18882439 + MGP_BALBcJ_P0036403 Zfp184 protein_coding protein_coding MGP_BALBcJ_T0036404.1 MGP_BALBcJ_G0020250.1 mouse_genomes_project 13 18871683 18880811 + Zfp184 protein_coding retained_intron MGP_BALBcJ_T0037837.1 MGP_BALBcJ_G0020796.1 mouse_genomes_project 13 94212790 94218646 + MGP_BALBcJ_P0037837 F2rl2 protein_coding protein_coding MGP_BALBcJ_T0038219.1 MGP_BALBcJ_G0020927.1 mouse_genomes_project 13 118344221 118393654 - MGP_BALBcJ_P0038219 Nim1k protein_coding protein_coding MGP_BALBcJ_T0038220.1 MGP_BALBcJ_G0020927.1 mouse_genomes_project 13 118357594 118372816 - MGP_BALBcJ_P0038220 Nim1k protein_coding protein_coding MGP_BALBcJ_T0102188.1 MGP_BALBcJ_G0040004.1 mouse_genomes_project 13 19223879 19224746 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0002491.1 MGP_BALBcJ_G0002398.1 mouse_genomes_project 13 16138250 16138310 + MGP_BALBcJ_P0002491 Trgj3 TR_J_gene TR_J_gene MGP_BALBcJ_T0003471.1 MGP_BALBcJ_G0003169.1 mouse_genomes_project 13 92091858 92095236 + Gm15622 antisense antisense MGP_BALBcJ_T0036757.1 MGP_BALBcJ_G0020426.1 mouse_genomes_project 13 36230855 36259672 - MGP_BALBcJ_P0036757 Slc35b3 protein_coding protein_coding MGP_BALBcJ_T0036758.1 MGP_BALBcJ_G0020426.1 mouse_genomes_project 13 36230855 36260010 - MGP_BALBcJ_P0036758 Slc35b3 protein_coding protein_coding MGP_BALBcJ_T0036759.1 MGP_BALBcJ_G0020426.1 mouse_genomes_project 13 36233449 36259650 - MGP_BALBcJ_P0036759 Slc35b3 protein_coding unknown_likely_coding MGP_BALBcJ_T0000897.1 MGP_BALBcJ_G0000828.1 mouse_genomes_project 13 115032241 115035181 + TEC TEC MGP_BALBcJ_T0037395.1 MGP_BALBcJ_G0020633.1 mouse_genomes_project 13 62841038 62996329 - MGP_BALBcJ_P0037395 Cntnap3 protein_coding protein_coding MGP_BALBcJ_T0009936.1 MGP_BALBcJ_G0008061.1 mouse_genomes_project 13 92397036 92397161 - Gm25534 miRNA miRNA MGP_BALBcJ_T0037597.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75448804 75558014 - MGP_BALBcJ_P0037597 Slf1 protein_coding protein_coding MGP_BALBcJ_T0037598.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75449689 75453112 - Slf1 protein_coding retained_intron MGP_BALBcJ_T0037599.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75524963 75558006 - MGP_BALBcJ_P0037599 Slf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037600.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75527609 75558006 - MGP_BALBcJ_P0037600 Slf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037601.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75528567 75554741 - MGP_BALBcJ_P0037601 Slf1 protein_coding protein_coding MGP_BALBcJ_T0037602.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75528653 75557979 - MGP_BALBcJ_P0037602 Slf1 protein_coding protein_coding MGP_BALBcJ_T0037603.1 MGP_BALBcJ_G0020732.1 mouse_genomes_project 13 75529594 75558001 - Slf1 protein_coding retained_intron MGP_BALBcJ_T0000892.1 MGP_BALBcJ_G0000823.1 mouse_genomes_project 13 100443223 100445392 - TEC TEC MGP_BALBcJ_T0037486.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67840548 67924289 + MGP_BALBcJ_P0037486 Nsun2 protein_coding protein_coding MGP_BALBcJ_T0037487.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67840570 67914767 + Nsun2 protein_coding processed_transcript MGP_BALBcJ_T0037490.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67920867 67942823 + MGP_BALBcJ_P0037490 Nsun2 protein_coding protein_coding MGP_BALBcJ_T0037491.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67920911 67943115 + MGP_BALBcJ_P0037491 Nsun2 protein_coding protein_coding MGP_BALBcJ_T0037492.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67921421 67928415 + Nsun2 protein_coding processed_transcript MGP_BALBcJ_T0037493.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67930145 67938460 + Nsun2 protein_coding retained_intron MGP_BALBcJ_T0037494.1 MGP_BALBcJ_G0020685.1 mouse_genomes_project 13 67939570 67940499 + Nsun2 protein_coding retained_intron MGP_BALBcJ_T0036632.1 MGP_BALBcJ_G0020377.1 mouse_genomes_project 13 30051384 30051777 - MGP_BALBcJ_P0036632 D930007J09Rik protein_coding protein_coding MGP_BALBcJ_T0017329.1 MGP_BALBcJ_G0015199.1 mouse_genomes_project 13 110465012 110465687 + processed_transcript processed_transcript MGP_BALBcJ_T0038112.1 MGP_BALBcJ_G0020878.1 mouse_genomes_project 13 108707502 108935034 - MGP_BALBcJ_P0038112 Rab3c protein_coding protein_coding MGP_BALBcJ_T0036589.1 MGP_BALBcJ_G0020357.1 mouse_genomes_project 13 25235418 25242755 + MGP_BALBcJ_P0036589 Prl4a1 protein_coding protein_coding MGP_BALBcJ_T0012938.1 MGP_BALBcJ_G0011035.1 mouse_genomes_project 13 105190468 105190714 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036603.1 MGP_BALBcJ_G0020361.1 mouse_genomes_project 13 27131330 27216610 - MGP_BALBcJ_P0036603 E2f3 protein_coding protein_coding MGP_BALBcJ_T0036604.1 MGP_BALBcJ_G0020361.1 mouse_genomes_project 13 27143555 27215150 - MGP_BALBcJ_P0036604 E2f3 protein_coding protein_coding MGP_BALBcJ_T0037884.1 MGP_BALBcJ_G0020810.1 mouse_genomes_project 13 95723341 95745192 - MGP_BALBcJ_P0037884 Hexb protein_coding protein_coding MGP_BALBcJ_T0006562.1 MGP_BALBcJ_G0005435.1 mouse_genomes_project 13 52578470 52579715 + 5330429C05Rik lincRNA lincRNA MGP_BALBcJ_T0037167.1 MGP_BALBcJ_G0020552.1 mouse_genomes_project 13 53217496 53223679 - MGP_BALBcJ_P0037167 Ddx41 protein_coding protein_coding MGP_BALBcJ_T0037853.1 MGP_BALBcJ_G0020803.1 mouse_genomes_project 13 95088283 95181972 + MGP_BALBcJ_P0037853 Col4a3bp protein_coding protein_coding MGP_BALBcJ_T0037854.1 MGP_BALBcJ_G0020803.1 mouse_genomes_project 13 95088400 95184124 + MGP_BALBcJ_P0037854 Col4a3bp protein_coding protein_coding MGP_BALBcJ_T0037855.1 MGP_BALBcJ_G0020803.1 mouse_genomes_project 13 95088400 95184124 + MGP_BALBcJ_P0037855 Col4a3bp protein_coding protein_coding MGP_BALBcJ_T0038192.1 MGP_BALBcJ_G0020913.1 mouse_genomes_project 13 115956570 115958930 - MGP_BALBcJ_P0038192 Gm17509 protein_coding protein_coding MGP_BALBcJ_T0036118.1 MGP_BALBcJ_G0020136.1 mouse_genomes_project 13 429714 430629 + MGP_BALBcJ_P0036118 Calm4 protein_coding protein_coding MGP_BALBcJ_T0036535.1 MGP_BALBcJ_G0020329.1 mouse_genomes_project 13 21893556 21904865 + MGP_BALBcJ_P0036535 Tdp2 protein_coding protein_coding MGP_BALBcJ_T0036536.1 MGP_BALBcJ_G0020329.1 mouse_genomes_project 13 21893699 21900123 + Tdp2 protein_coding processed_transcript MGP_BALBcJ_T0037425.1 MGP_BALBcJ_G0020647.1 mouse_genomes_project 13 65078523 65141169 + MGP_BALBcJ_P0037425 Ptdss1 protein_coding protein_coding MGP_BALBcJ_T0037317.1 MGP_BALBcJ_G0020601.1 mouse_genomes_project 13 58565473 58570068 - MGP_BALBcJ_P0037317 Ctsll3 protein_coding protein_coding MGP_BALBcJ_T0036794.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40056239 40521547 + MGP_BALBcJ_P0036794 Phactr1 protein_coding protein_coding MGP_BALBcJ_T0036795.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40056415 40337724 + Phactr1 protein_coding retained_intron MGP_BALBcJ_T0036796.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40057129 40518267 + MGP_BALBcJ_P0036796 Phactr1 protein_coding protein_coding MGP_BALBcJ_T0036797.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40058314 40518211 + MGP_BALBcJ_P0036797 Phactr1 protein_coding protein_coding MGP_BALBcJ_T0036798.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40086236 40518419 + MGP_BALBcJ_P0036798 Phactr1 protein_coding protein_coding MGP_BALBcJ_T0036799.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40086274 40521549 + MGP_BALBcJ_P0036799 Phactr1 protein_coding protein_coding MGP_BALBcJ_T0036800.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40244914 40518326 + MGP_BALBcJ_P0036800 Phactr1 protein_coding protein_coding MGP_BALBcJ_T0036801.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40245501 40335482 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036802.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40495285 40518401 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036803.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40505933 40518429 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036804.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40505948 40518377 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036805.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40508930 40518271 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036806.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40508930 40518271 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036807.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40508962 40518271 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036808.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40516023 40517267 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036809.1 MGP_BALBcJ_G0020445.1 mouse_genomes_project 13 40518401 40521535 + Phactr1 protein_coding processed_transcript MGP_BALBcJ_T0036910.1 MGP_BALBcJ_G0020481.1 mouse_genomes_project 13 46669811 46683818 - MGP_BALBcJ_P0036910 Card19 protein_coding protein_coding MGP_BALBcJ_T0098500.1 MGP_BALBcJ_G0036554.1 mouse_genomes_project 13 115397772 115397863 + Gm23198 rRNA rRNA MGP_BALBcJ_T0012922.1 MGP_BALBcJ_G0011019.1 mouse_genomes_project 13 75348396 75349065 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037539.1 MGP_BALBcJ_G0020706.1 mouse_genomes_project 13 72229771 72256403 - MGP_BALBcJ_P0037539 Trip13 protein_coding protein_coding MGP_BALBcJ_T0009909.1 MGP_BALBcJ_G0008034.1 mouse_genomes_project 13 45993661 45993758 + Gm24111 miRNA miRNA MGP_BALBcJ_T0037256.1 MGP_BALBcJ_G0020584.1 mouse_genomes_project 13 56148247 56156762 + MGP_BALBcJ_P0037256 Rmi1 protein_coding protein_coding MGP_BALBcJ_T0102206.1 MGP_BALBcJ_G0040022.1 mouse_genomes_project 13 19965225 19965515 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036245.1 MGP_BALBcJ_G0020175.1 mouse_genomes_project 13 9780248 9795794 - MGP_BALBcJ_P0036245 protein_coding protein_coding MGP_BALBcJ_T0000872.1 MGP_BALBcJ_G0000803.1 mouse_genomes_project 13 38083682 38086320 - TEC TEC MGP_BALBcJ_T0036382.1 MGP_BALBcJ_G0020236.1 mouse_genomes_project 13 18630684 18631065 + MGP_BALBcJ_P0036382 Hist1h2bm protein_coding protein_coding MGP_BALBcJ_T0037714.1 MGP_BALBcJ_G0020753.1 mouse_genomes_project 13 89062798 89063164 + MGP_BALBcJ_P0037714 Gm21726 protein_coding protein_coding MGP_BALBcJ_T0037169.1 MGP_BALBcJ_G0020554.1 mouse_genomes_project 13 53279579 53284109 + MGP_BALBcJ_P0037169 Tmed9 protein_coding protein_coding MGP_BALBcJ_T0098837.1 MGP_BALBcJ_G0036887.1 mouse_genomes_project 13 89858619 89859072 - Gm29540 sense_intronic sense_intronic MGP_BALBcJ_T0036761.1 MGP_BALBcJ_G0020428.1 mouse_genomes_project 13 38044962 38049087 + MGP_BALBcJ_P0036761 Gm9979 protein_coding protein_coding MGP_BALBcJ_T0006610.1 MGP_BALBcJ_G0005469.1 mouse_genomes_project 13 98017628 98022488 - lincRNA lincRNA MGP_BALBcJ_T0036284.1 MGP_BALBcJ_G0020190.1 mouse_genomes_project 13 11498167 11506137 + MGP_BALBcJ_P0036284 AW209491 protein_coding protein_coding MGP_BALBcJ_T0036285.1 MGP_BALBcJ_G0020190.1 mouse_genomes_project 13 11498180 11506137 + MGP_BALBcJ_P0036285 AW209491 protein_coding protein_coding MGP_BALBcJ_T0037960.1 MGP_BALBcJ_G0020840.1 mouse_genomes_project 13 99319030 99335921 + MGP_BALBcJ_P0037960 protein_coding protein_coding MGP_BALBcJ_T0037961.1 MGP_BALBcJ_G0020840.1 mouse_genomes_project 13 99319413 99322610 + protein_coding retained_intron MGP_BALBcJ_T0037963.1 MGP_BALBcJ_G0020840.1 mouse_genomes_project 13 99319677 99322688 + protein_coding retained_intron MGP_BALBcJ_T0009945.1 MGP_BALBcJ_G0008070.1 mouse_genomes_project 13 111713759 111713850 + Mir449a miRNA miRNA MGP_BALBcJ_T0037196.1 MGP_BALBcJ_G0020564.1 mouse_genomes_project 13 53870634 53875800 - MGP_BALBcJ_P0037196 Tifab protein_coding protein_coding MGP_BALBcJ_T0036334.1 MGP_BALBcJ_G0020212.1 mouse_genomes_project 13 18047586 18048650 - MGP_BALBcJ_P0036334 Olfr1368 protein_coding protein_coding MGP_BALBcJ_T0036335.1 MGP_BALBcJ_G0020212.1 mouse_genomes_project 13 18048212 18051440 - MGP_BALBcJ_P0036335 Olfr1368 protein_coding protein_coding MGP_BALBcJ_T0036440.1 MGP_BALBcJ_G0020282.1 mouse_genomes_project 13 20210260 20211187 - MGP_BALBcJ_P0036440 Vmn1r188 protein_coding protein_coding MGP_BALBcJ_T0012910.1 MGP_BALBcJ_G0011007.1 mouse_genomes_project 13 65640745 65641445 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006606.1 MGP_BALBcJ_G0005465.1 mouse_genomes_project 13 97021127 97033184 - 2310005E17Rik lincRNA lincRNA MGP_BALBcJ_T0036420.1 MGP_BALBcJ_G0020262.1 mouse_genomes_project 13 19253165 19254062 + MGP_BALBcJ_P0036420 Vmn1r197 protein_coding protein_coding MGP_BALBcJ_T0006602.1 MGP_BALBcJ_G0005463.1 mouse_genomes_project 13 96283028 96297367 - 5330416C01Rik lincRNA lincRNA MGP_BALBcJ_T0006603.1 MGP_BALBcJ_G0005463.1 mouse_genomes_project 13 96284863 96293067 - 5330416C01Rik lincRNA lincRNA MGP_BALBcJ_T0006604.1 MGP_BALBcJ_G0005463.1 mouse_genomes_project 13 96294649 96297335 - 5330416C01Rik lincRNA lincRNA MGP_BALBcJ_T0036331.1 MGP_BALBcJ_G0020209.1 mouse_genomes_project 13 17973680 17974631 - MGP_BALBcJ_P0036331 Olfr1370 protein_coding protein_coding MGP_BALBcJ_T0036471.1 MGP_BALBcJ_G0020305.1 mouse_genomes_project 13 20737529 20737927 - MGP_BALBcJ_P0036471 Hist1h4c protein_coding protein_coding MGP_BALBcJ_T0003439.1 MGP_BALBcJ_G0003154.1 mouse_genomes_project 13 56013951 56029293 + Gm26555 antisense antisense MGP_BALBcJ_T0003440.1 MGP_BALBcJ_G0003154.1 mouse_genomes_project 13 56013951 56031850 + Gm26555 antisense antisense MGP_BALBcJ_T0003441.1 MGP_BALBcJ_G0003154.1 mouse_genomes_project 13 56013959 56031851 + Gm26555 antisense antisense MGP_BALBcJ_T0003416.1 MGP_BALBcJ_G0003135.1 mouse_genomes_project 13 19750349 19751165 + Gm11314 antisense antisense MGP_BALBcJ_T0017323.1 MGP_BALBcJ_G0015195.1 mouse_genomes_project 13 79306306 79307607 - 1700023H06Rik processed_transcript processed_transcript MGP_BALBcJ_T0003409.1 MGP_BALBcJ_G0003129.1 mouse_genomes_project 13 6982881 7281192 + antisense antisense MGP_BALBcJ_T0037901.1 MGP_BALBcJ_G0020819.1 mouse_genomes_project 13 97084582 97087236 - MGP_BALBcJ_P0037901 Gm10320 protein_coding protein_coding MGP_BALBcJ_T0036454.1 MGP_BALBcJ_G0020290.1 mouse_genomes_project 13 20562800 20563475 + MGP_BALBcJ_P0036454 Hist1h3g protein_coding protein_coding MGP_BALBcJ_T0102195.1 MGP_BALBcJ_G0040011.1 mouse_genomes_project 13 19576263 19577357 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036882.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45940303 45969907 - MGP_BALBcJ_P0036882 Zfp169 protein_coding protein_coding MGP_BALBcJ_T0036883.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45940315 45969865 - MGP_BALBcJ_P0036883 Zfp169 protein_coding protein_coding MGP_BALBcJ_T0036884.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45941858 45962014 - MGP_BALBcJ_P0036884 Zfp169 protein_coding protein_coding MGP_BALBcJ_T0036885.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45942110 45962014 - MGP_BALBcJ_P0036885 Zfp169 protein_coding protein_coding MGP_BALBcJ_T0036886.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45943908 45969881 - MGP_BALBcJ_P0036886 Zfp169 protein_coding protein_coding MGP_BALBcJ_T0036887.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45943986 45969897 - MGP_BALBcJ_P0036887 Zfp169 protein_coding protein_coding MGP_BALBcJ_T0036888.1 MGP_BALBcJ_G0020473.1 mouse_genomes_project 13 45949190 45969922 - Zfp169 protein_coding retained_intron MGP_BALBcJ_T0036635.1 MGP_BALBcJ_G0020379.1 mouse_genomes_project 13 30132014 30142498 - MGP_BALBcJ_P0036635 Serpinb1c protein_coding protein_coding MGP_BALBcJ_T0036636.1 MGP_BALBcJ_G0020379.1 mouse_genomes_project 13 30134188 30142475 - MGP_BALBcJ_P0036636 Serpinb1c protein_coding protein_coding MGP_BALBcJ_T0036723.1 MGP_BALBcJ_G0020412.1 mouse_genomes_project 13 33452623 33790219 + MGP_BALBcJ_P0036723 Fars2 protein_coding protein_coding MGP_BALBcJ_T0012937.1 MGP_BALBcJ_G0011034.1 mouse_genomes_project 13 103581795 103582203 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036605.1 MGP_BALBcJ_G0020362.1 mouse_genomes_project 13 27365372 27477624 + MGP_BALBcJ_P0036605 Mboat1 protein_coding protein_coding MGP_BALBcJ_T0036606.1 MGP_BALBcJ_G0020362.1 mouse_genomes_project 13 27365405 27462944 + MGP_BALBcJ_P0036606 Mboat1 protein_coding protein_coding MGP_BALBcJ_T0036607.1 MGP_BALBcJ_G0020362.1 mouse_genomes_project 13 27365420 27392422 + Mboat1 protein_coding processed_transcript MGP_BALBcJ_T0036942.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47964230 47980136 + MGP_BALBcJ_P0036942 Fbxw17 protein_coding protein_coding MGP_BALBcJ_T0036943.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47964247 47972023 + MGP_BALBcJ_P0036943 Fbxw17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036944.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47964252 47976624 + Fbxw17 protein_coding processed_transcript MGP_BALBcJ_T0036945.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47964252 47980147 + MGP_BALBcJ_P0036945 Fbxw17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036946.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47964261 47966646 + Fbxw17 protein_coding retained_intron MGP_BALBcJ_T0036947.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47970221 47973657 + Fbxw17 protein_coding processed_transcript MGP_BALBcJ_T0036948.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47976336 47978477 + Fbxw17 protein_coding retained_intron MGP_BALBcJ_T0036949.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47977487 47980143 + Fbxw17 protein_coding retained_intron MGP_BALBcJ_T0036950.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47977537 47978743 + Fbxw17 protein_coding retained_intron MGP_BALBcJ_T0036951.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47977723 47978606 + Fbxw17 protein_coding retained_intron MGP_BALBcJ_T0036952.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47978042 47978720 + Fbxw17 protein_coding retained_intron MGP_BALBcJ_T0036953.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47978077 47980136 + MGP_BALBcJ_P0036953 Fbxw17 protein_coding protein_coding MGP_BALBcJ_T0036954.1 MGP_BALBcJ_G0020495.1 mouse_genomes_project 13 47978551 47980130 + MGP_BALBcJ_P0036954 Fbxw17 protein_coding protein_coding MGP_BALBcJ_T0037010.1 MGP_BALBcJ_G0020514.1 mouse_genomes_project 13 51696839 51701299 - MGP_BALBcJ_P0037010 Drd1 protein_coding protein_coding MGP_BALBcJ_T0036462.1 MGP_BALBcJ_G0020298.1 mouse_genomes_project 13 20604979 20605472 + MGP_BALBcJ_P0036462 Hist1h2ad protein_coding protein_coding MGP_BALBcJ_T0012868.1 MGP_BALBcJ_G0010965.1 mouse_genomes_project 13 20386360 20386516 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009899.1 MGP_BALBcJ_G0008024.1 mouse_genomes_project 13 20600340 20600455 + Gm44394 miRNA miRNA MGP_BALBcJ_T0036592.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26426464 27082705 - MGP_BALBcJ_P0036592 Cdkal1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036593.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26558577 27082732 - MGP_BALBcJ_P0036593 Cdkal1 protein_coding protein_coding MGP_BALBcJ_T0036594.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26633342 26705206 - MGP_BALBcJ_P0036594 Cdkal1 protein_coding protein_coding MGP_BALBcJ_T0036595.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26674374 26747571 - MGP_BALBcJ_P0036595 Cdkal1 protein_coding protein_coding MGP_BALBcJ_T0036596.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26704466 27082701 - Cdkal1 protein_coding retained_intron MGP_BALBcJ_T0036597.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26744323 27082701 - Cdkal1 protein_coding retained_intron MGP_BALBcJ_T0036598.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26751953 27082697 - MGP_BALBcJ_P0036598 Cdkal1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036599.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 26935504 27082715 - Cdkal1 protein_coding retained_intron MGP_BALBcJ_T0036600.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 27004380 27082489 - MGP_BALBcJ_P0036600 Cdkal1 protein_coding protein_coding MGP_BALBcJ_T0036601.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 27029498 27082721 - MGP_BALBcJ_P0036601 Cdkal1 protein_coding protein_coding MGP_BALBcJ_T0036602.1 MGP_BALBcJ_G0020360.1 mouse_genomes_project 13 27064059 27082723 - MGP_BALBcJ_P0036602 Cdkal1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037285.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57338469 57352995 + MGP_BALBcJ_P0037285 protein_coding protein_coding MGP_BALBcJ_T0037286.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57338505 57387760 + MGP_BALBcJ_P0037286 protein_coding protein_coding MGP_BALBcJ_T0037287.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57338604 57362016 + MGP_BALBcJ_P0037287 protein_coding protein_coding MGP_BALBcJ_T0037288.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57339380 57377483 + MGP_BALBcJ_P0037288 protein_coding protein_coding MGP_BALBcJ_T0037289.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57348563 57353468 + protein_coding retained_intron MGP_BALBcJ_T0037290.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57351320 57370008 + MGP_BALBcJ_P0037290 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037291.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57362461 57380599 + protein_coding retained_intron MGP_BALBcJ_T0037292.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57362586 57378414 + protein_coding retained_intron MGP_BALBcJ_T0037293.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57362621 57378440 + protein_coding retained_intron MGP_BALBcJ_T0037294.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57375831 57378630 + protein_coding retained_intron MGP_BALBcJ_T0037295.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57375831 57380921 + MGP_BALBcJ_P0037295 protein_coding protein_coding MGP_BALBcJ_T0037296.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57377409 57381913 + protein_coding retained_intron MGP_BALBcJ_T0037297.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57385690 57387605 + protein_coding retained_intron MGP_BALBcJ_T0037298.1 MGP_BALBcJ_G0020588.1 mouse_genomes_project 13 57387383 57387718 + protein_coding processed_transcript MGP_BALBcJ_T0037676.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83657839 83735248 - MGP_BALBcJ_P0037676 Rasa1 protein_coding protein_coding MGP_BALBcJ_T0037677.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83658874 83661415 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037678.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83659110 83664757 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037679.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83664425 83669761 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037680.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83667274 83669072 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037681.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83671749 83674123 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037682.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83672339 83673528 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037683.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83681224 83690245 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0037684.1 MGP_BALBcJ_G0020746.1 mouse_genomes_project 13 83687323 83694158 - Rasa1 protein_coding retained_intron MGP_BALBcJ_T0036414.1 MGP_BALBcJ_G0020256.1 mouse_genomes_project 13 19105454 19106351 - MGP_BALBcJ_P0036414 Vmn1r191 protein_coding protein_coding MGP_BALBcJ_T0099366.1 MGP_BALBcJ_G0037402.1 mouse_genomes_project 13 27376995 27377179 - Gm23206 snRNA snRNA MGP_BALBcJ_T0036623.1 MGP_BALBcJ_G0020374.1 mouse_genomes_project 13 29050791 29581884 - MGP_BALBcJ_P0036623 Gmds protein_coding protein_coding MGP_BALBcJ_T0036624.1 MGP_BALBcJ_G0020374.1 mouse_genomes_project 13 29338309 29581757 - Gmds protein_coding retained_intron MGP_BALBcJ_T0036625.1 MGP_BALBcJ_G0020374.1 mouse_genomes_project 13 29397548 29467582 - Gmds protein_coding processed_transcript MGP_BALBcJ_T0036626.1 MGP_BALBcJ_G0020374.1 mouse_genomes_project 13 29465681 29581796 - MGP_BALBcJ_P0036626 Gmds protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037607.1 MGP_BALBcJ_G0020735.1 mouse_genomes_project 13 76436584 76437978 + MGP_BALBcJ_P0037607 Pou5f2 protein_coding protein_coding MGP_BALBcJ_T0037631.1 MGP_BALBcJ_G0020739.1 mouse_genomes_project 13 80098436 80110433 + MGP_BALBcJ_P0037631 Lysmd3 protein_coding protein_coding MGP_BALBcJ_T0037574.1 MGP_BALBcJ_G0020722.1 mouse_genomes_project 13 73505103 73547799 + MGP_BALBcJ_P0037574 Pcsk1 protein_coding protein_coding MGP_BALBcJ_T0037575.1 MGP_BALBcJ_G0020722.1 mouse_genomes_project 13 73505193 73521883 + Pcsk1 protein_coding retained_intron MGP_BALBcJ_T0037012.1 MGP_BALBcJ_G0020516.1 mouse_genomes_project 13 51838046 51869889 + MGP_BALBcJ_P0037012 Hrh2 protein_coding protein_coding MGP_BALBcJ_T0037009.1 MGP_BALBcJ_G0020513.1 mouse_genomes_project 13 51177290 51177647 + MGP_BALBcJ_P0037009 Gm5449 protein_coding protein_coding MGP_BALBcJ_T0003451.1 MGP_BALBcJ_G0003159.1 mouse_genomes_project 13 66085858 66145714 - antisense antisense MGP_BALBcJ_T0003463.1 MGP_BALBcJ_G0003165.1 mouse_genomes_project 13 82679249 82681843 - A230107N01Rik antisense antisense MGP_BALBcJ_T0003464.1 MGP_BALBcJ_G0003165.1 mouse_genomes_project 13 82680277 82681768 - A230107N01Rik antisense antisense MGP_BALBcJ_T0100663.1 MGP_BALBcJ_G0038699.1 mouse_genomes_project 13 93841589 93841727 + Snora47 snoRNA snoRNA MGP_BALBcJ_T0100651.1 MGP_BALBcJ_G0038687.1 mouse_genomes_project 13 68487907 68488035 + Gm26018 snoRNA snoRNA MGP_BALBcJ_T0037040.1 MGP_BALBcJ_G0020523.1 mouse_genomes_project 13 52247181 52248133 + MGP_BALBcJ_P0037040 Higd2a protein_coding protein_coding MGP_BALBcJ_T0017308.1 MGP_BALBcJ_G0015188.1 mouse_genomes_project 13 22003914 22007931 + 9330162012Rik processed_transcript processed_transcript MGP_BALBcJ_T0012901.1 MGP_BALBcJ_G0010998.1 mouse_genomes_project 13 52155158 52155543 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036815.1 MGP_BALBcJ_G0020450.1 mouse_genomes_project 13 40776527 40854957 - MGP_BALBcJ_P0036815 Ranbp9 protein_coding protein_coding MGP_BALBcJ_T0003435.1 MGP_BALBcJ_G0003152.1 mouse_genomes_project 13 53288642 53291245 - Gm15911 antisense antisense MGP_BALBcJ_T0036756.1 MGP_BALBcJ_G0020425.1 mouse_genomes_project 13 35926205 35939362 - MGP_BALBcJ_P0036756 Eef1e1 protein_coding protein_coding MGP_BALBcJ_T0036568.1 MGP_BALBcJ_G0020345.1 mouse_genomes_project 13 24434661 24447296 + MGP_BALBcJ_P0036568 Prl8a2 protein_coding protein_coding MGP_BALBcJ_T0036569.1 MGP_BALBcJ_G0020345.1 mouse_genomes_project 13 24434667 24447284 + MGP_BALBcJ_P0036569 Prl8a2 protein_coding protein_coding MGP_BALBcJ_T0036324.1 MGP_BALBcJ_G0020205.1 mouse_genomes_project 13 16664396 16669925 - MGP_BALBcJ_P0036324 A530099J19Rik protein_coding protein_coding MGP_BALBcJ_T0098711.1 MGP_BALBcJ_G0036765.1 mouse_genomes_project 13 30831525 30831737 + Gm25043 ribozyme ribozyme MGP_BALBcJ_T0102232.1 MGP_BALBcJ_G0040048.1 mouse_genomes_project 13 104865280 104865836 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006495.1 MGP_BALBcJ_G0005391.1 mouse_genomes_project 13 20455075 20458123 - C230035I16Rik lincRNA lincRNA MGP_BALBcJ_T0006496.1 MGP_BALBcJ_G0005391.1 mouse_genomes_project 13 20455207 20457927 - C230035I16Rik lincRNA lincRNA MGP_BALBcJ_T0036413.1 MGP_BALBcJ_G0020255.1 mouse_genomes_project 13 18968543 18969006 + MGP_BALBcJ_P0036413 Hist1h2bj protein_coding protein_coding MGP_BALBcJ_T0036123.1 MGP_BALBcJ_G0020139.1 mouse_genomes_project 13 513760 524361 + MGP_BALBcJ_P0036123 Tubal3 protein_coding protein_coding MGP_BALBcJ_T0037515.1 MGP_BALBcJ_G0020698.1 mouse_genomes_project 13 71779070 71828209 + MGP_BALBcJ_P0037515 Lpcat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037516.1 MGP_BALBcJ_G0020698.1 mouse_genomes_project 13 71779070 71828209 + MGP_BALBcJ_P0037516 Lpcat1 protein_coding protein_coding MGP_BALBcJ_T0037517.1 MGP_BALBcJ_G0020698.1 mouse_genomes_project 13 71779104 71826899 + MGP_BALBcJ_P0037517 Lpcat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037518.1 MGP_BALBcJ_G0020698.1 mouse_genomes_project 13 71779296 71813259 + Lpcat1 protein_coding retained_intron MGP_BALBcJ_T0037519.1 MGP_BALBcJ_G0020698.1 mouse_genomes_project 13 71814661 71825628 + Lpcat1 protein_coding retained_intron MGP_BALBcJ_T0037520.1 MGP_BALBcJ_G0020698.1 mouse_genomes_project 13 71822735 71823393 + Lpcat1 protein_coding retained_intron MGP_BALBcJ_T0012902.1 MGP_BALBcJ_G0010999.1 mouse_genomes_project 13 52505412 52505668 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006618.1 MGP_BALBcJ_G0005476.1 mouse_genomes_project 13 110183879 110213226 - Gm15290 lincRNA lincRNA MGP_BALBcJ_T0100636.1 MGP_BALBcJ_G0038672.1 mouse_genomes_project 13 28589353 28589468 + Gm22330 snoRNA snoRNA MGP_BALBcJ_T0006568.1 MGP_BALBcJ_G0005440.1 mouse_genomes_project 13 57491859 57493846 + 4930528D03Rik lincRNA lincRNA MGP_BALBcJ_T0006569.1 MGP_BALBcJ_G0005440.1 mouse_genomes_project 13 57491864 57496648 + 4930528D03Rik lincRNA lincRNA MGP_BALBcJ_T0037018.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52159155 52204903 + MGP_BALBcJ_P0037018 Simc1 protein_coding protein_coding MGP_BALBcJ_T0037019.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52159155 52204903 + MGP_BALBcJ_P0037019 Simc1 protein_coding protein_coding MGP_BALBcJ_T0037020.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52159180 52195234 + MGP_BALBcJ_P0037020 Simc1 protein_coding protein_coding MGP_BALBcJ_T0037021.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52159185 52195233 + MGP_BALBcJ_P0037021 Simc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037022.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52167516 52179606 + Simc1 protein_coding processed_transcript MGP_BALBcJ_T0037023.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52184283 52195350 + Simc1 protein_coding retained_intron MGP_BALBcJ_T0037024.1 MGP_BALBcJ_G0020519.1 mouse_genomes_project 13 52200470 52204399 + Simc1 protein_coding retained_intron MGP_BALBcJ_T0037850.1 MGP_BALBcJ_G0020801.1 mouse_genomes_project 13 95026421 95088151 - MGP_BALBcJ_P0037850 Polk protein_coding protein_coding MGP_BALBcJ_T0037851.1 MGP_BALBcJ_G0020801.1 mouse_genomes_project 13 95027902 95064366 - MGP_BALBcJ_P0037851 Polk protein_coding protein_coding MGP_BALBcJ_T0012911.1 MGP_BALBcJ_G0011008.1 mouse_genomes_project 13 65872543 65873354 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012920.1 MGP_BALBcJ_G0011017.1 mouse_genomes_project 13 75102459 75102879 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036205.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306564 6387376 - MGP_BALBcJ_P0036205 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036206.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306564 6388261 - MGP_BALBcJ_P0036206 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036207.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306564 6387441 - MGP_BALBcJ_P0036207 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036208.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306566 6388107 - MGP_BALBcJ_P0036208 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036209.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306569 6313002 - Zmynd11 protein_coding retained_intron MGP_BALBcJ_T0036210.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306569 6387423 - MGP_BALBcJ_P0036210 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036211.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6306823 6387903 - MGP_BALBcJ_P0036211 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036212.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6308590 6342799 - MGP_BALBcJ_P0036212 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036213.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6310867 6312239 - Zmynd11 protein_coding retained_intron MGP_BALBcJ_T0036214.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6315203 6317868 - Zmynd11 protein_coding retained_intron MGP_BALBcJ_T0036215.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6316015 6388217 - MGP_BALBcJ_P0036215 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036216.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6316861 6387397 - MGP_BALBcJ_P0036216 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036217.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6319372 6387884 - MGP_BALBcJ_P0036217 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036218.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6319372 6388268 - MGP_BALBcJ_P0036218 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036219.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6319391 6358111 - Zmynd11 protein_coding processed_transcript MGP_BALBcJ_T0036220.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6319428 6357753 - Zmynd11 protein_coding processed_transcript MGP_BALBcJ_T0036221.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6319431 6387371 - MGP_BALBcJ_P0036221 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036222.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6320386 6358219 - MGP_BALBcJ_P0036222 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0036223.1 MGP_BALBcJ_G0020164.1 mouse_genomes_project 13 6331763 6387407 - MGP_BALBcJ_P0036223 Zmynd11 protein_coding protein_coding MGP_BALBcJ_T0009921.1 MGP_BALBcJ_G0008046.1 mouse_genomes_project 13 58288583 58288717 - Gm25000 miRNA miRNA MGP_BALBcJ_T0037836.1 MGP_BALBcJ_G0020795.1 mouse_genomes_project 13 94143267 94414677 - MGP_BALBcJ_P0037836 Iqgap2 protein_coding protein_coding MGP_BALBcJ_T0006513.1 MGP_BALBcJ_G0005404.1 mouse_genomes_project 13 28562365 28563541 - Gm11373 lincRNA lincRNA MGP_BALBcJ_T0036378.1 MGP_BALBcJ_G0020233.1 mouse_genomes_project 13 18605092 18610577 + MGP_BALBcJ_P0036378 protein_coding protein_coding MGP_BALBcJ_T0036379.1 MGP_BALBcJ_G0020233.1 mouse_genomes_project 13 18609596 18610598 + MGP_BALBcJ_P0036379 protein_coding protein_coding MGP_BALBcJ_T0099364.1 MGP_BALBcJ_G0037400.1 mouse_genomes_project 13 21548456 21548559 - Gm22013 snRNA snRNA MGP_BALBcJ_T0037381.1 MGP_BALBcJ_G0020625.1 mouse_genomes_project 13 62202527 62236245 - MGP_BALBcJ_P0037381 Slc35d2 protein_coding protein_coding MGP_BALBcJ_T0038048.1 MGP_BALBcJ_G0020863.1 mouse_genomes_project 13 103612408 103718904 - MGP_BALBcJ_P0038048 Rgs7bp protein_coding protein_coding MGP_BALBcJ_T0036243.1 MGP_BALBcJ_G0020173.1 mouse_genomes_project 13 9201313 9254277 - MGP_BALBcJ_P0036243 Gpr137b protein_coding unknown_likely_coding MGP_BALBcJ_T0006528.1 MGP_BALBcJ_G0005413.1 mouse_genomes_project 13 34682215 34684662 - Gm4035 lincRNA lincRNA MGP_BALBcJ_T0006529.1 MGP_BALBcJ_G0005413.1 mouse_genomes_project 13 34682327 34697473 - Gm4035 lincRNA lincRNA MGP_BALBcJ_T0006574.1 MGP_BALBcJ_G0005444.1 mouse_genomes_project 13 67458595 67460611 + Gm26844 lincRNA lincRNA MGP_BALBcJ_T0006563.1 MGP_BALBcJ_G0005436.1 mouse_genomes_project 13 52592012 52595494 - 4930526F13Rik lincRNA lincRNA MGP_BALBcJ_T0037463.1 MGP_BALBcJ_G0020669.1 mouse_genomes_project 13 65725321 65739819 - MGP_BALBcJ_P0037463 protein_coding protein_coding MGP_BALBcJ_T0037464.1 MGP_BALBcJ_G0020669.1 mouse_genomes_project 13 65731629 65739819 - MGP_BALBcJ_P0037464 protein_coding protein_coding MGP_BALBcJ_T0036651.1 MGP_BALBcJ_G0020389.1 mouse_genomes_project 13 30514322 30523587 + MGP_BALBcJ_P0036651 Serpinb9e protein_coding protein_coding MGP_BALBcJ_T0036780.1 MGP_BALBcJ_G0020436.1 mouse_genomes_project 13 38527748 38565534 - MGP_BALBcJ_P0036780 Elovl2 protein_coding protein_coding MGP_BALBcJ_T0036781.1 MGP_BALBcJ_G0020436.1 mouse_genomes_project 13 38527752 38565291 - MGP_BALBcJ_P0036781 Elovl2 protein_coding protein_coding MGP_BALBcJ_T0011333.1 MGP_BALBcJ_G0009458.1 mouse_genomes_project 13 54411456 54411705 + Gm27698 misc_RNA misc_RNA MGP_BALBcJ_T0099375.1 MGP_BALBcJ_G0037411.1 mouse_genomes_project 13 42407187 42407291 - Gm23104 snRNA snRNA MGP_BALBcJ_T0036891.1 MGP_BALBcJ_G0020476.1 mouse_genomes_project 13 46120588 46124098 + MGP_BALBcJ_P0036891 Barx1 protein_coding protein_coding MGP_BALBcJ_T0036672.1 MGP_BALBcJ_G0020394.1 mouse_genomes_project 13 31202070 31225995 + MGP_BALBcJ_P0036672 Nqo2 protein_coding protein_coding MGP_BALBcJ_T0036673.1 MGP_BALBcJ_G0020394.1 mouse_genomes_project 13 31202070 31225995 + MGP_BALBcJ_P0036673 Nqo2 protein_coding protein_coding MGP_BALBcJ_T0100647.1 MGP_BALBcJ_G0038683.1 mouse_genomes_project 13 53864315 53864438 + Gm25148 snoRNA snoRNA MGP_BALBcJ_T0003472.1 MGP_BALBcJ_G0003170.1 mouse_genomes_project 13 92171597 92184645 - AW495222 antisense antisense MGP_BALBcJ_T0003473.1 MGP_BALBcJ_G0003170.1 mouse_genomes_project 13 92180814 92184604 - AW495222 antisense antisense MGP_BALBcJ_T0006620.1 MGP_BALBcJ_G0005478.1 mouse_genomes_project 13 110516541 110518051 + Gm15324 lincRNA lincRNA MGP_BALBcJ_T0037806.1 MGP_BALBcJ_G0020785.1 mouse_genomes_project 13 93294926 93349245 + MGP_BALBcJ_P0037806 Tbca protein_coding protein_coding MGP_BALBcJ_T0038050.1 MGP_BALBcJ_G0020865.1 mouse_genomes_project 13 103790364 103942289 - MGP_BALBcJ_P0038050 Rnf180 protein_coding unknown_likely_coding MGP_BALBcJ_T0038051.1 MGP_BALBcJ_G0020865.1 mouse_genomes_project 13 103811633 103942289 - MGP_BALBcJ_P0038051 Rnf180 protein_coding protein_coding MGP_BALBcJ_T0012879.1 MGP_BALBcJ_G0010976.1 mouse_genomes_project 13 23270417 23270934 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036858.1 MGP_BALBcJ_G0020466.1 mouse_genomes_project 13 44157544 44342420 - MGP_BALBcJ_P0036858 Kif13a protein_coding protein_coding MGP_BALBcJ_T0036859.1 MGP_BALBcJ_G0020466.1 mouse_genomes_project 13 44157545 44342310 - MGP_BALBcJ_P0036859 Kif13a protein_coding unknown_likely_coding MGP_BALBcJ_T0037576.1 MGP_BALBcJ_G0020723.1 mouse_genomes_project 13 74125934 74190766 + MGP_BALBcJ_P0037576 Ell2 protein_coding protein_coding MGP_BALBcJ_T0037958.1 MGP_BALBcJ_G0020839.1 mouse_genomes_project 13 99284932 99319111 - MGP_BALBcJ_P0037958 Rad17 protein_coding protein_coding MGP_BALBcJ_T0037959.1 MGP_BALBcJ_G0020839.1 mouse_genomes_project 13 99284932 99319111 - MGP_BALBcJ_P0037959 Rad17 protein_coding protein_coding MGP_BALBcJ_T0009926.1 MGP_BALBcJ_G0008051.1 mouse_genomes_project 13 61387402 61387475 + Mir27b miRNA miRNA MGP_BALBcJ_T0037093.1 MGP_BALBcJ_G0020532.1 mouse_genomes_project 13 52614417 52675168 + MGP_BALBcJ_P0037093 Unc5a protein_coding protein_coding MGP_BALBcJ_T0037094.1 MGP_BALBcJ_G0020532.1 mouse_genomes_project 13 52614417 52675168 + MGP_BALBcJ_P0037094 Unc5a protein_coding protein_coding MGP_BALBcJ_T0037095.1 MGP_BALBcJ_G0020532.1 mouse_genomes_project 13 52665712 52668952 + MGP_BALBcJ_P0037095 Unc5a protein_coding protein_coding MGP_BALBcJ_T0037096.1 MGP_BALBcJ_G0020532.1 mouse_genomes_project 13 52672159 52673803 + Unc5a protein_coding retained_intron MGP_BALBcJ_T0037097.1 MGP_BALBcJ_G0020532.1 mouse_genomes_project 13 52672829 52674636 + MGP_BALBcJ_P0037097 Unc5a protein_coding protein_coding MGP_BALBcJ_T0036417.1 MGP_BALBcJ_G0020259.1 mouse_genomes_project 13 19166103 19166994 + MGP_BALBcJ_P0036417 Vmn1r194 protein_coding protein_coding MGP_BALBcJ_T0036353.1 MGP_BALBcJ_G0020219.1 mouse_genomes_project 13 18317070 18336591 - MGP_BALBcJ_P0036353 protein_coding protein_coding MGP_BALBcJ_T0036354.1 MGP_BALBcJ_G0020219.1 mouse_genomes_project 13 18317073 18336400 - MGP_BALBcJ_P0036354 protein_coding protein_coding MGP_BALBcJ_T0036355.1 MGP_BALBcJ_G0020219.1 mouse_genomes_project 13 18317645 18336734 - MGP_BALBcJ_P0036355 protein_coding protein_coding MGP_BALBcJ_T0036356.1 MGP_BALBcJ_G0020219.1 mouse_genomes_project 13 18317645 18336748 - MGP_BALBcJ_P0036356 protein_coding protein_coding MGP_BALBcJ_T0036357.1 MGP_BALBcJ_G0020219.1 mouse_genomes_project 13 18318987 18336400 - MGP_BALBcJ_P0036357 protein_coding protein_coding MGP_BALBcJ_T0099362.1 MGP_BALBcJ_G0037398.1 mouse_genomes_project 13 18397721 18397785 - Gm23779 snRNA snRNA MGP_BALBcJ_T0037126.1 MGP_BALBcJ_G0020538.1 mouse_genomes_project 13 52886638 52994280 + MGP_BALBcJ_P0037126 Nsd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0009929.1 MGP_BALBcJ_G0008054.1 mouse_genomes_project 13 69439061 69439182 + Mir466f-4 miRNA miRNA MGP_BALBcJ_T0036783.1 MGP_BALBcJ_G0020438.1 mouse_genomes_project 13 38615967 38616142 - MGP_BALBcJ_P0036783 Gm17364 protein_coding protein_coding MGP_BALBcJ_T0011340.1 MGP_BALBcJ_G0009465.1 mouse_genomes_project 13 102097719 102098000 - Gm24441 misc_RNA misc_RNA MGP_BALBcJ_T0012945.1 MGP_BALBcJ_G0011042.1 mouse_genomes_project 13 114862335 114862667 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098498.1 MGP_BALBcJ_G0036552.1 mouse_genomes_project 13 102078769 102078874 + n-R5s56 rRNA rRNA MGP_BALBcJ_T0012932.1 MGP_BALBcJ_G0011029.1 mouse_genomes_project 13 96010817 96012007 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037582.1 MGP_BALBcJ_G0020727.1 mouse_genomes_project 13 74421759 74438688 - MGP_BALBcJ_P0037582 Rfesd protein_coding protein_coding MGP_BALBcJ_T0037583.1 MGP_BALBcJ_G0020727.1 mouse_genomes_project 13 74421759 74438582 - MGP_BALBcJ_P0037583 Rfesd protein_coding protein_coding MGP_BALBcJ_T0037584.1 MGP_BALBcJ_G0020727.1 mouse_genomes_project 13 74421761 74438538 - MGP_BALBcJ_P0037584 Rfesd protein_coding protein_coding MGP_BALBcJ_T0037912.1 MGP_BALBcJ_G0020824.1 mouse_genomes_project 13 97605652 97606133 - MGP_BALBcJ_P0037912 1700024P04Rik protein_coding protein_coding MGP_BALBcJ_T0006515.1 MGP_BALBcJ_G0005406.1 mouse_genomes_project 13 28586307 28604062 - G630018N14Rik lincRNA lincRNA MGP_BALBcJ_T0006516.1 MGP_BALBcJ_G0005406.1 mouse_genomes_project 13 28597393 28602690 - G630018N14Rik lincRNA lincRNA MGP_BALBcJ_T0012929.1 MGP_BALBcJ_G0011026.1 mouse_genomes_project 13 90781309 90781558 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036281.1 MGP_BALBcJ_G0020187.1 mouse_genomes_project 13 11099776 11393343 - MGP_BALBcJ_P0036281 Hecw1 protein_coding protein_coding MGP_BALBcJ_T0100628.1 MGP_BALBcJ_G0038664.1 mouse_genomes_project 13 5572098 5572217 - snoRNA snoRNA MGP_BALBcJ_T0102223.1 MGP_BALBcJ_G0040039.1 mouse_genomes_project 13 30900558 30900717 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101625.1 MGP_BALBcJ_G0039636.1 mouse_genomes_project 13 31270486 31274570 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101626.1 MGP_BALBcJ_G0039636.1 mouse_genomes_project 13 31271903 31272460 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0036580.1 MGP_BALBcJ_G0020351.1 mouse_genomes_project 13 24692155 24701322 - MGP_BALBcJ_P0036580 Prl7b1 protein_coding protein_coding MGP_BALBcJ_T0003488.1 MGP_BALBcJ_G0003180.1 mouse_genomes_project 13 116453719 116466994 - 4933413L06Rik antisense antisense MGP_BALBcJ_T0003489.1 MGP_BALBcJ_G0003180.1 mouse_genomes_project 13 116453974 116466970 - 4933413L06Rik antisense antisense MGP_BALBcJ_T0038115.1 MGP_BALBcJ_G0020881.1 mouse_genomes_project 13 109916435 109919172 + MGP_BALBcJ_P0038115 Actbl2 protein_coding protein_coding MGP_BALBcJ_T0036955.1 MGP_BALBcJ_G0020496.1 mouse_genomes_project 13 48013898 48021947 + MGP_BALBcJ_P0036955 Nutm2 protein_coding protein_coding MGP_BALBcJ_T0036767.1 MGP_BALBcJ_G0020431.1 mouse_genomes_project 13 38347983 38359985 + MGP_BALBcJ_P0036767 Pak1ip1 protein_coding protein_coding MGP_BALBcJ_T0036768.1 MGP_BALBcJ_G0020431.1 mouse_genomes_project 13 38347984 38355587 + Pak1ip1 protein_coding retained_intron MGP_BALBcJ_T0036769.1 MGP_BALBcJ_G0020431.1 mouse_genomes_project 13 38348198 38359977 + Pak1ip1 protein_coding retained_intron MGP_BALBcJ_T0036770.1 MGP_BALBcJ_G0020431.1 mouse_genomes_project 13 38348220 38355236 + Pak1ip1 protein_coding processed_transcript MGP_BALBcJ_T0036771.1 MGP_BALBcJ_G0020431.1 mouse_genomes_project 13 38348226 38359989 + Pak1ip1 protein_coding retained_intron MGP_BALBcJ_T0009890.1 MGP_BALBcJ_G0008015.1 mouse_genomes_project 13 7217940 7218023 - Gm23415 miRNA miRNA MGP_BALBcJ_T0037604.1 MGP_BALBcJ_G0020733.1 mouse_genomes_project 13 75558080 76020839 + MGP_BALBcJ_P0037604 2210408I21Rik protein_coding protein_coding MGP_BALBcJ_T0036271.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10937659 11002830 + Arid4b protein_coding processed_transcript MGP_BALBcJ_T0036272.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10938211 11048032 + MGP_BALBcJ_P0036272 Arid4b protein_coding protein_coding MGP_BALBcJ_T0036273.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10938212 11079224 + MGP_BALBcJ_P0036273 Arid4b protein_coding protein_coding MGP_BALBcJ_T0036274.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10938219 11079219 + MGP_BALBcJ_P0036274 Arid4b protein_coding protein_coding MGP_BALBcJ_T0036275.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10938219 11079460 + MGP_BALBcJ_P0036275 Arid4b protein_coding protein_coding MGP_BALBcJ_T0036276.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10938226 11043754 + MGP_BALBcJ_P0036276 Arid4b protein_coding protein_coding MGP_BALBcJ_T0036277.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 10938482 10994415 + Arid4b protein_coding processed_transcript MGP_BALBcJ_T0036278.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 11048050 11073582 + MGP_BALBcJ_P0036278 Arid4b protein_coding protein_coding MGP_BALBcJ_T0036279.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 11056237 11071091 + Arid4b protein_coding processed_transcript MGP_BALBcJ_T0036280.1 MGP_BALBcJ_G0020186.1 mouse_genomes_project 13 11071033 11077611 + Arid4b protein_coding processed_transcript MGP_BALBcJ_T0036345.1 MGP_BALBcJ_G0020217.1 mouse_genomes_project 13 18258197 18265194 + MGP_BALBcJ_P0036345 Zscan12 protein_coding protein_coding MGP_BALBcJ_T0036346.1 MGP_BALBcJ_G0020217.1 mouse_genomes_project 13 18258658 18265194 + MGP_BALBcJ_P0036346 Zscan12 protein_coding protein_coding MGP_BALBcJ_T0006512.1 MGP_BALBcJ_G0005403.1 mouse_genomes_project 13 28534754 28627304 + Gm11376 lincRNA lincRNA MGP_BALBcJ_T0006491.1 MGP_BALBcJ_G0005387.1 mouse_genomes_project 13 6014653 6019231 + Gm26601 lincRNA lincRNA MGP_BALBcJ_T0009917.1 MGP_BALBcJ_G0008042.1 mouse_genomes_project 13 55755266 55755342 - Mir874 miRNA miRNA MGP_BALBcJ_T0036627.1 MGP_BALBcJ_G0020375.1 mouse_genomes_project 13 29948485 30029847 - MGP_BALBcJ_P0036627 Mylk4 protein_coding protein_coding MGP_BALBcJ_T0036628.1 MGP_BALBcJ_G0020375.1 mouse_genomes_project 13 29952027 30029784 - MGP_BALBcJ_P0036628 Mylk4 protein_coding protein_coding MGP_BALBcJ_T0036629.1 MGP_BALBcJ_G0020375.1 mouse_genomes_project 13 29956216 29985004 - MGP_BALBcJ_P0036629 Mylk4 protein_coding unknown_likely_coding MGP_BALBcJ_T0036630.1 MGP_BALBcJ_G0020375.1 mouse_genomes_project 13 30014583 30032022 - Mylk4 protein_coding processed_transcript MGP_BALBcJ_T0036819.1 MGP_BALBcJ_G0020453.1 mouse_genomes_project 13 41167739 41185759 + MGP_BALBcJ_P0036819 Cd83 protein_coding protein_coding MGP_BALBcJ_T0012889.1 MGP_BALBcJ_G0010986.1 mouse_genomes_project 13 27625262 27625580 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006598.1 MGP_BALBcJ_G0005461.1 mouse_genomes_project 13 95831066 95833819 + C430039J16Rik lincRNA lincRNA MGP_BALBcJ_T0002584.1 MGP_BALBcJ_G0002483.1 mouse_genomes_project 13 16261361 16266023 - MGP_BALBcJ_P0002584 Tcrg-V3 TR_V_gene TR_V_gene MGP_BALBcJ_T0036148.1 MGP_BALBcJ_G0020151.1 mouse_genomes_project 13 2453108 2462035 + MGP_BALBcJ_P0036148 Klf6 protein_coding protein_coding MGP_BALBcJ_T0038164.1 MGP_BALBcJ_G0020900.1 mouse_genomes_project 13 111891368 111899782 + MGP_BALBcJ_P0038164 Esm1 protein_coding protein_coding MGP_BALBcJ_T0100639.1 MGP_BALBcJ_G0038675.1 mouse_genomes_project 13 33912430 33912562 + Gm26395 snoRNA snoRNA MGP_BALBcJ_T0037449.1 MGP_BALBcJ_G0020661.1 mouse_genomes_project 13 65521402 65532478 - MGP_BALBcJ_P0037449 protein_coding protein_coding MGP_BALBcJ_T0099365.1 MGP_BALBcJ_G0037401.1 mouse_genomes_project 13 24994245 24994345 + Gm22476 snRNA snRNA MGP_BALBcJ_T0036746.1 MGP_BALBcJ_G0020420.1 mouse_genomes_project 13 35419736 35467881 + MGP_BALBcJ_P0036746 Dsp protein_coding protein_coding MGP_BALBcJ_T0036747.1 MGP_BALBcJ_G0020420.1 mouse_genomes_project 13 35419756 35467881 + MGP_BALBcJ_P0036747 Dsp protein_coding protein_coding MGP_BALBcJ_T0036748.1 MGP_BALBcJ_G0020420.1 mouse_genomes_project 13 35447426 35451293 + Dsp protein_coding processed_transcript MGP_BALBcJ_T0036136.1 MGP_BALBcJ_G0020145.1 mouse_genomes_project 13 850584 866493 - MGP_BALBcJ_P0036136 Akr1c12 protein_coding protein_coding MGP_BALBcJ_T0036458.1 MGP_BALBcJ_G0020294.1 mouse_genomes_project 13 20584288 20585032 + MGP_BALBcJ_P0036458 Hist1h1d protein_coding protein_coding MGP_BALBcJ_T0012861.1 MGP_BALBcJ_G0010958.1 mouse_genomes_project 13 19090602 19092524 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006479.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29851 37415 + lincRNA lincRNA MGP_BALBcJ_T0006480.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29855 36425 + lincRNA lincRNA MGP_BALBcJ_T0006481.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29864 43285 + lincRNA lincRNA MGP_BALBcJ_T0006482.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29867 44531 + lincRNA lincRNA MGP_BALBcJ_T0006483.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29876 43809 + lincRNA lincRNA MGP_BALBcJ_T0006484.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29883 36636 + lincRNA lincRNA MGP_BALBcJ_T0006485.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29898 36987 + lincRNA lincRNA MGP_BALBcJ_T0006486.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29924 47681 + lincRNA lincRNA MGP_BALBcJ_T0006487.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29925 44511 + lincRNA lincRNA MGP_BALBcJ_T0006488.1 MGP_BALBcJ_G0005385.1 mouse_genomes_project 13 29947 49569 + lincRNA lincRNA MGP_BALBcJ_T0037134.1 MGP_BALBcJ_G0020543.1 mouse_genomes_project 13 53048960 53063950 + MGP_BALBcJ_P0037134 Rgs14 protein_coding protein_coding MGP_BALBcJ_T0037135.1 MGP_BALBcJ_G0020543.1 mouse_genomes_project 13 53048999 53058705 + MGP_BALBcJ_P0037135 Rgs14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037136.1 MGP_BALBcJ_G0020543.1 mouse_genomes_project 13 53058428 53063949 + Rgs14 protein_coding retained_intron MGP_BALBcJ_T0038227.1 MGP_BALBcJ_G0020932.1 mouse_genomes_project 13 118487788 118488244 + MGP_BALBcJ_P0038227 protein_coding protein_coding MGP_BALBcJ_T0037557.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72643706 72672249 - MGP_BALBcJ_P0037557 Sdha protein_coding protein_coding MGP_BALBcJ_T0037558.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72644184 72645707 - Sdha protein_coding retained_intron MGP_BALBcJ_T0037559.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72649371 72650548 - Sdha protein_coding retained_intron MGP_BALBcJ_T0037560.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72659578 72672171 - Sdha protein_coding processed_transcript MGP_BALBcJ_T0037561.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72661111 72661874 - Sdha protein_coding retained_intron MGP_BALBcJ_T0037562.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72665353 72672208 - Sdha protein_coding retained_intron MGP_BALBcJ_T0037563.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72666821 72672126 - Sdha protein_coding processed_transcript MGP_BALBcJ_T0037564.1 MGP_BALBcJ_G0020716.1 mouse_genomes_project 13 72666860 72672204 - Sdha protein_coding processed_transcript MGP_BALBcJ_T0037551.1 MGP_BALBcJ_G0020713.1 mouse_genomes_project 13 72490993 72530488 - MGP_BALBcJ_P0037551 Exoc3 protein_coding protein_coding MGP_BALBcJ_T0012873.1 MGP_BALBcJ_G0010970.1 mouse_genomes_project 13 21470896 21471231 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037471.1 MGP_BALBcJ_G0020674.1 mouse_genomes_project 13 66023133 66030274 - MGP_BALBcJ_P0037471 protein_coding protein_coding MGP_BALBcJ_T0012893.1 MGP_BALBcJ_G0010990.1 mouse_genomes_project 13 29116148 29117190 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037104.1 MGP_BALBcJ_G0020534.1 mouse_genomes_project 13 52697014 52777923 - MGP_BALBcJ_P0037104 Uimc1 protein_coding protein_coding MGP_BALBcJ_T0037105.1 MGP_BALBcJ_G0020534.1 mouse_genomes_project 13 52697014 52777928 - MGP_BALBcJ_P0037105 Uimc1 protein_coding protein_coding MGP_BALBcJ_T0037106.1 MGP_BALBcJ_G0020534.1 mouse_genomes_project 13 52697329 52777882 - MGP_BALBcJ_P0037106 Uimc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037107.1 MGP_BALBcJ_G0020534.1 mouse_genomes_project 13 52697431 52777928 - MGP_BALBcJ_P0037107 Uimc1 protein_coding protein_coding MGP_BALBcJ_T0037108.1 MGP_BALBcJ_G0020534.1 mouse_genomes_project 13 52751947 52777927 - Uimc1 protein_coding retained_intron MGP_BALBcJ_T0037109.1 MGP_BALBcJ_G0020534.1 mouse_genomes_project 13 52763001 52771155 - Uimc1 protein_coding retained_intron MGP_BALBcJ_T0036762.1 MGP_BALBcJ_G0020429.1 mouse_genomes_project 13 38057206 38072120 - MGP_BALBcJ_P0036762 Tfap2a protein_coding protein_coding MGP_BALBcJ_T0036763.1 MGP_BALBcJ_G0020429.1 mouse_genomes_project 13 38058220 38075404 - MGP_BALBcJ_P0036763 Tfap2a protein_coding protein_coding MGP_BALBcJ_T0100659.1 MGP_BALBcJ_G0038695.1 mouse_genomes_project 13 80494114 80494245 + Gm24295 snoRNA snoRNA MGP_BALBcJ_T0000896.1 MGP_BALBcJ_G0000827.1 mouse_genomes_project 13 112907696 112917876 + TEC TEC MGP_BALBcJ_T0102198.1 MGP_BALBcJ_G0040014.1 mouse_genomes_project 13 19711290 19712396 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036333.1 MGP_BALBcJ_G0020211.1 mouse_genomes_project 13 18020355 18037243 + MGP_BALBcJ_P0036333 protein_coding protein_coding MGP_BALBcJ_T0037495.1 MGP_BALBcJ_G0020687.1 mouse_genomes_project 13 68012858 68050024 - MGP_BALBcJ_P0037495 Ube2ql1 protein_coding protein_coding MGP_BALBcJ_T0037438.1 MGP_BALBcJ_G0020654.1 mouse_genomes_project 13 65358354 65375450 + MGP_BALBcJ_P0037438 Zfp455 protein_coding protein_coding MGP_BALBcJ_T0037439.1 MGP_BALBcJ_G0020654.1 mouse_genomes_project 13 65358383 65375450 + MGP_BALBcJ_P0037439 Zfp455 protein_coding protein_coding MGP_BALBcJ_T0002490.1 MGP_BALBcJ_G0002397.1 mouse_genomes_project 13 16069816 16069876 + MGP_BALBcJ_P0002490 Trgj1 TR_J_gene TR_J_gene MGP_BALBcJ_T0036202.1 MGP_BALBcJ_G0020163.1 mouse_genomes_project 13 5902416 6290542 + MGP_BALBcJ_P0036202 Dip2c protein_coding protein_coding MGP_BALBcJ_T0036203.1 MGP_BALBcJ_G0020163.1 mouse_genomes_project 13 5902821 6287793 + MGP_BALBcJ_P0036203 Dip2c protein_coding protein_coding MGP_BALBcJ_T0036204.1 MGP_BALBcJ_G0020163.1 mouse_genomes_project 13 5902870 6287793 + MGP_BALBcJ_P0036204 Dip2c protein_coding protein_coding MGP_BALBcJ_T0037964.1 MGP_BALBcJ_G0020842.1 mouse_genomes_project 13 99347477 99365983 + MGP_BALBcJ_P0037964 Ccdc125 protein_coding protein_coding MGP_BALBcJ_T0003453.1 MGP_BALBcJ_G0003161.1 mouse_genomes_project 13 68900410 68903469 + 1700100L14Rik antisense antisense MGP_BALBcJ_T0003454.1 MGP_BALBcJ_G0003161.1 mouse_genomes_project 13 68900449 68903464 + 1700100L14Rik antisense antisense MGP_BALBcJ_T0100658.1 MGP_BALBcJ_G0038694.1 mouse_genomes_project 13 77581703 77581847 + Gm25383 snoRNA snoRNA MGP_BALBcJ_T0017326.1 MGP_BALBcJ_G0015197.1 mouse_genomes_project 13 106992751 106996080 - Gm2822 processed_transcript processed_transcript MGP_BALBcJ_T0037403.1 MGP_BALBcJ_G0020638.1 mouse_genomes_project 13 63223245 63224193 + MGP_BALBcJ_P0037403 Olfr465-ps1 protein_coding protein_coding MGP_BALBcJ_T0009922.1 MGP_BALBcJ_G0008047.1 mouse_genomes_project 13 60671009 60671117 + Mir713 miRNA miRNA MGP_BALBcJ_T0037335.1 MGP_BALBcJ_G0020617.1 mouse_genomes_project 13 60698527 60703994 - MGP_BALBcJ_P0037335 Zfp934 protein_coding protein_coding MGP_BALBcJ_T0012930.1 MGP_BALBcJ_G0011027.1 mouse_genomes_project 13 91762071 91763042 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036840.1 MGP_BALBcJ_G0020458.1 mouse_genomes_project 13 42890648 42929853 + MGP_BALBcJ_P0036840 Gmpr protein_coding protein_coding MGP_BALBcJ_T0036841.1 MGP_BALBcJ_G0020458.1 mouse_genomes_project 13 42897044 42929369 + MGP_BALBcJ_P0036841 Gmpr protein_coding protein_coding MGP_BALBcJ_T0036842.1 MGP_BALBcJ_G0020458.1 mouse_genomes_project 13 42922282 42926021 + Gmpr protein_coding retained_intron MGP_BALBcJ_T0037832.1 MGP_BALBcJ_G0020791.1 mouse_genomes_project 13 93942946 93957272 - MGP_BALBcJ_P0037832 Crhbp protein_coding protein_coding MGP_BALBcJ_T0036961.1 MGP_BALBcJ_G0020502.1 mouse_genomes_project 13 49259303 49291391 + MGP_BALBcJ_P0036961 Secisbp2 protein_coding protein_coding MGP_BALBcJ_T0036962.1 MGP_BALBcJ_G0020502.1 mouse_genomes_project 13 49259347 49273684 + MGP_BALBcJ_P0036962 Secisbp2 protein_coding protein_coding MGP_BALBcJ_T0036963.1 MGP_BALBcJ_G0020502.1 mouse_genomes_project 13 49259403 49264644 + Secisbp2 protein_coding processed_transcript MGP_BALBcJ_T0036964.1 MGP_BALBcJ_G0020502.1 mouse_genomes_project 13 49259403 49272773 + Secisbp2 protein_coding processed_transcript MGP_BALBcJ_T0036965.1 MGP_BALBcJ_G0020502.1 mouse_genomes_project 13 49287079 49289876 + Secisbp2 protein_coding retained_intron MGP_BALBcJ_T0036966.1 MGP_BALBcJ_G0020502.1 mouse_genomes_project 13 49289119 49290836 + Secisbp2 protein_coding retained_intron MGP_BALBcJ_T0036419.1 MGP_BALBcJ_G0020261.1 mouse_genomes_project 13 19218460 19219366 + MGP_BALBcJ_P0036419 Vmn1r196 protein_coding protein_coding MGP_BALBcJ_T0037535.1 MGP_BALBcJ_G0020704.1 mouse_genomes_project 13 72077927 72131305 + MGP_BALBcJ_P0037535 Slc12a7 protein_coding protein_coding MGP_BALBcJ_T0006585.1 MGP_BALBcJ_G0005452.1 mouse_genomes_project 13 80220476 80225624 - Gm17259 lincRNA lincRNA MGP_BALBcJ_T0038024.1 MGP_BALBcJ_G0020855.1 mouse_genomes_project 13 102807110 102842571 - MGP_BALBcJ_P0038024 Trappc13 protein_coding protein_coding MGP_BALBcJ_T0038025.1 MGP_BALBcJ_G0020855.1 mouse_genomes_project 13 102807117 102842527 - MGP_BALBcJ_P0038025 Trappc13 protein_coding protein_coding MGP_BALBcJ_T0038026.1 MGP_BALBcJ_G0020855.1 mouse_genomes_project 13 102808258 102842525 - MGP_BALBcJ_P0038026 Trappc13 protein_coding protein_coding MGP_BALBcJ_T0038027.1 MGP_BALBcJ_G0020855.1 mouse_genomes_project 13 102808895 102842509 - MGP_BALBcJ_P0038027 Trappc13 protein_coding protein_coding MGP_BALBcJ_T0038028.1 MGP_BALBcJ_G0020855.1 mouse_genomes_project 13 102831204 102842561 - Trappc13 protein_coding retained_intron MGP_BALBcJ_T0038029.1 MGP_BALBcJ_G0020855.1 mouse_genomes_project 13 102837825 102842541 - Trappc13 protein_coding processed_transcript MGP_BALBcJ_T0012933.1 MGP_BALBcJ_G0011030.1 mouse_genomes_project 13 97594986 97595319 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006493.1 MGP_BALBcJ_G0005389.1 mouse_genomes_project 13 20277622 20317956 - 4930557F10Rik lincRNA lincRNA MGP_BALBcJ_T0036788.1 MGP_BALBcJ_G0020442.1 mouse_genomes_project 13 39123965 39209515 - MGP_BALBcJ_P0036788 Adtrp protein_coding protein_coding MGP_BALBcJ_T0036789.1 MGP_BALBcJ_G0020442.1 mouse_genomes_project 13 39124950 39209711 - MGP_BALBcJ_P0036789 Adtrp protein_coding protein_coding MGP_BALBcJ_T0036790.1 MGP_BALBcJ_G0020442.1 mouse_genomes_project 13 39125407 39209643 - MGP_BALBcJ_P0036790 Adtrp protein_coding protein_coding MGP_BALBcJ_T0036791.1 MGP_BALBcJ_G0020442.1 mouse_genomes_project 13 39138330 39190344 - MGP_BALBcJ_P0036791 Adtrp protein_coding protein_coding MGP_BALBcJ_T0012903.1 MGP_BALBcJ_G0011000.1 mouse_genomes_project 13 58539352 58539718 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009901.1 MGP_BALBcJ_G0008026.1 mouse_genomes_project 13 20788233 20788351 + Gm44346 miRNA miRNA MGP_BALBcJ_T0002492.1 MGP_BALBcJ_G0002399.1 mouse_genomes_project 13 16240201 16240261 - MGP_BALBcJ_P0002492 Trgj2 TR_J_gene TR_J_gene MGP_BALBcJ_T0036387.1 MGP_BALBcJ_G0020241.1 mouse_genomes_project 13 18696260 18696687 - MGP_BALBcJ_P0036387 Hist1h3i protein_coding protein_coding MGP_BALBcJ_T0036510.1 MGP_BALBcJ_G0020324.1 mouse_genomes_project 13 21436813 21531289 + MGP_BALBcJ_P0036510 Cmah protein_coding protein_coding MGP_BALBcJ_T0036511.1 MGP_BALBcJ_G0020324.1 mouse_genomes_project 13 21455472 21496329 + Cmah protein_coding processed_transcript MGP_BALBcJ_T0036512.1 MGP_BALBcJ_G0020324.1 mouse_genomes_project 13 21477691 21495888 + Cmah protein_coding processed_transcript MGP_BALBcJ_T0036513.1 MGP_BALBcJ_G0020324.1 mouse_genomes_project 13 21478014 21497298 + Cmah protein_coding processed_transcript MGP_BALBcJ_T0038071.1 MGP_BALBcJ_G0020870.1 mouse_genomes_project 13 105680548 105682257 + MGP_BALBcJ_P0038071 3830408C21Rik protein_coding protein_coding MGP_BALBcJ_T0037391.1 MGP_BALBcJ_G0020629.1 mouse_genomes_project 13 62401992 62422710 - MGP_BALBcJ_P0037391 protein_coding protein_coding MGP_BALBcJ_T0037110.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782642 52812498 + MGP_BALBcJ_P0037110 Zfp346 protein_coding protein_coding MGP_BALBcJ_T0037111.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782645 52799926 + MGP_BALBcJ_P0037111 Zfp346 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037112.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782648 52809833 + MGP_BALBcJ_P0037112 Zfp346 protein_coding protein_coding MGP_BALBcJ_T0037113.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782666 52810151 + MGP_BALBcJ_P0037113 Zfp346 protein_coding protein_coding MGP_BALBcJ_T0037114.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782667 52808046 + MGP_BALBcJ_P0037114 Zfp346 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037115.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782667 52810201 + MGP_BALBcJ_P0037115 Zfp346 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037116.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782671 52809942 + MGP_BALBcJ_P0037116 Zfp346 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037117.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782673 52810034 + MGP_BALBcJ_P0037117 Zfp346 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037118.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52782733 52809821 + MGP_BALBcJ_P0037118 Zfp346 protein_coding protein_coding MGP_BALBcJ_T0037119.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52790241 52791124 + Zfp346 protein_coding retained_intron MGP_BALBcJ_T0037120.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52799463 52809802 + Zfp346 protein_coding retained_intron MGP_BALBcJ_T0037121.1 MGP_BALBcJ_G0020535.1 mouse_genomes_project 13 52807669 52810076 + Zfp346 protein_coding retained_intron MGP_BALBcJ_T0037400.1 MGP_BALBcJ_G0020637.1 mouse_genomes_project 13 63136287 63184636 - MGP_BALBcJ_P0037400 Mfsd14b protein_coding protein_coding MGP_BALBcJ_T0037401.1 MGP_BALBcJ_G0020637.1 mouse_genomes_project 13 63136676 63184643 - MGP_BALBcJ_P0037401 Mfsd14b protein_coding protein_coding MGP_BALBcJ_T0037402.1 MGP_BALBcJ_G0020637.1 mouse_genomes_project 13 63138203 63141435 - Mfsd14b protein_coding retained_intron MGP_BALBcJ_T0036633.1 MGP_BALBcJ_G0020378.1 mouse_genomes_project 13 30090724 30100622 - MGP_BALBcJ_P0036633 Serpinb1a protein_coding protein_coding MGP_BALBcJ_T0036634.1 MGP_BALBcJ_G0020378.1 mouse_genomes_project 13 30090725 30100622 - MGP_BALBcJ_P0036634 Serpinb1a protein_coding protein_coding MGP_BALBcJ_T0099381.1 MGP_BALBcJ_G0037417.1 mouse_genomes_project 13 62405678 62405766 - Gm25654 snRNA snRNA MGP_BALBcJ_T0012863.1 MGP_BALBcJ_G0010960.1 mouse_genomes_project 13 19411024 19414577 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037325.1 MGP_BALBcJ_G0020608.1 mouse_genomes_project 13 58775339 58782285 - MGP_BALBcJ_P0037325 Ctsq protein_coding protein_coding MGP_BALBcJ_T0037326.1 MGP_BALBcJ_G0020608.1 mouse_genomes_project 13 58775349 58778350 - Ctsq protein_coding retained_intron MGP_BALBcJ_T0036657.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31156436 31240369 - MGP_BALBcJ_P0036657 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036658.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31156436 31176054 - MGP_BALBcJ_P0036658 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036659.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31156436 31175939 - MGP_BALBcJ_P0036659 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036660.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31156445 31175852 - MGP_BALBcJ_P0036660 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036661.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31156750 31160579 - Serpinb6a protein_coding processed_transcript MGP_BALBcJ_T0036662.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31157308 31240369 - MGP_BALBcJ_P0036662 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036663.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31161445 31175697 - MGP_BALBcJ_P0036663 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036664.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31161461 31175811 - MGP_BALBcJ_P0036664 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036665.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31161538 31175670 - MGP_BALBcJ_P0036665 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036666.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31162143 31175834 - Serpinb6a protein_coding retained_intron MGP_BALBcJ_T0036667.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31163833 31175833 - MGP_BALBcJ_P0036667 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036668.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31163905 31240342 - MGP_BALBcJ_P0036668 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036669.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31169947 31175810 - MGP_BALBcJ_P0036669 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036670.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31169960 31240361 - MGP_BALBcJ_P0036670 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036671.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31171404 31240315 - MGP_BALBcJ_P0036671 Serpinb6a protein_coding protein_coding MGP_BALBcJ_T0036674.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31208551 31240342 - Serpinb6a protein_coding processed_transcript MGP_BALBcJ_T0036675.1 MGP_BALBcJ_G0020393.1 mouse_genomes_project 13 31224017 31240345 - Serpinb6a protein_coding processed_transcript MGP_BALBcJ_T0036584.1 MGP_BALBcJ_G0020354.1 mouse_genomes_project 13 24813957 24822780 - MGP_BALBcJ_P0036584 Prl7d1 protein_coding protein_coding MGP_BALBcJ_T0036585.1 MGP_BALBcJ_G0020354.1 mouse_genomes_project 13 24822449 24822768 - Prl7d1 protein_coding processed_transcript MGP_BALBcJ_T0036631.1 MGP_BALBcJ_G0020376.1 mouse_genomes_project 13 30050965 30071240 + MGP_BALBcJ_P0036631 Wrnip1 protein_coding protein_coding MGP_BALBcJ_T0011334.1 MGP_BALBcJ_G0009459.1 mouse_genomes_project 13 54415499 54415626 + Gm27301 misc_RNA misc_RNA MGP_BALBcJ_T0012934.1 MGP_BALBcJ_G0011031.1 mouse_genomes_project 13 99445991 99446300 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036496.1 MGP_BALBcJ_G0020322.1 mouse_genomes_project 13 21004782 21042425 - MGP_BALBcJ_P0036496 Scgn protein_coding protein_coding MGP_BALBcJ_T0036497.1 MGP_BALBcJ_G0020322.1 mouse_genomes_project 13 21013448 21018501 - Scgn protein_coding processed_transcript MGP_BALBcJ_T0037327.1 MGP_BALBcJ_G0020609.1 mouse_genomes_project 13 58916681 58922080 - MGP_BALBcJ_P0037327 Ctsr protein_coding protein_coding MGP_BALBcJ_T0038035.1 MGP_BALBcJ_G0020858.1 mouse_genomes_project 13 102893925 102914185 + MGP_BALBcJ_P0038035 Cenpk protein_coding protein_coding MGP_BALBcJ_T0038036.1 MGP_BALBcJ_G0020858.1 mouse_genomes_project 13 102894358 102916512 + MGP_BALBcJ_P0038036 Cenpk protein_coding protein_coding MGP_BALBcJ_T0037738.1 MGP_BALBcJ_G0020761.1 mouse_genomes_project 13 90369734 90611316 - MGP_BALBcJ_P0037738 Rasgrf2 protein_coding protein_coding MGP_BALBcJ_T0037739.1 MGP_BALBcJ_G0020761.1 mouse_genomes_project 13 90373765 90611316 - MGP_BALBcJ_P0037739 Rasgrf2 protein_coding protein_coding MGP_BALBcJ_T0037740.1 MGP_BALBcJ_G0020761.1 mouse_genomes_project 13 90448850 90474148 - MGP_BALBcJ_P0037740 Rasgrf2 protein_coding protein_coding MGP_BALBcJ_T0037741.1 MGP_BALBcJ_G0020761.1 mouse_genomes_project 13 90501187 90503598 - MGP_BALBcJ_P0037741 Rasgrf2 protein_coding protein_coding MGP_BALBcJ_T0037742.1 MGP_BALBcJ_G0020761.1 mouse_genomes_project 13 90501187 90611478 - MGP_BALBcJ_P0037742 Rasgrf2 protein_coding protein_coding MGP_BALBcJ_T0006597.1 MGP_BALBcJ_G0005460.1 mouse_genomes_project 13 94657246 94658213 + Gm29543 lincRNA lincRNA MGP_BALBcJ_T0036728.1 MGP_BALBcJ_G0020415.1 mouse_genomes_project 13 34609312 34679434 + MGP_BALBcJ_P0036728 Ly86 protein_coding protein_coding MGP_BALBcJ_T0037605.1 MGP_BALBcJ_G0020734.1 mouse_genomes_project 13 76107912 76562277 + MGP_BALBcJ_P0037605 Fam172a protein_coding protein_coding MGP_BALBcJ_T0037606.1 MGP_BALBcJ_G0020734.1 mouse_genomes_project 13 76107917 76562270 + MGP_BALBcJ_P0037606 Fam172a protein_coding protein_coding MGP_BALBcJ_T0036392.1 MGP_BALBcJ_G0020245.1 mouse_genomes_project 13 18700667 18752157 + MGP_BALBcJ_P0036392 Hist1h2br protein_coding protein_coding MGP_BALBcJ_T0036393.1 MGP_BALBcJ_G0020245.1 mouse_genomes_project 13 18700679 18753022 + MGP_BALBcJ_P0036393 Hist1h2br protein_coding protein_coding MGP_BALBcJ_T0006605.1 MGP_BALBcJ_G0005464.1 mouse_genomes_project 13 96301067 96311435 + Gm26619 lincRNA lincRNA MGP_BALBcJ_T0038172.1 MGP_BALBcJ_G0020906.1 mouse_genomes_project 13 113141340 113147795 - MGP_BALBcJ_P0038172 Fst protein_coding protein_coding MGP_BALBcJ_T0038173.1 MGP_BALBcJ_G0020906.1 mouse_genomes_project 13 113142501 113147651 - MGP_BALBcJ_P0038173 Fst protein_coding unknown_likely_coding MGP_BALBcJ_T0036455.1 MGP_BALBcJ_G0020291.1 mouse_genomes_project 13 20570348 20571115 - MGP_BALBcJ_P0036455 Hist1h2bh protein_coding protein_coding MGP_BALBcJ_T0002579.1 MGP_BALBcJ_G0002480.1 mouse_genomes_project 13 16042474 16043007 + MGP_BALBcJ_P0002579 Tcrg-V4 TR_V_gene TR_V_gene MGP_BALBcJ_T0000894.1 MGP_BALBcJ_G0000825.1 mouse_genomes_project 13 100814152 100816086 - TEC TEC MGP_BALBcJ_T0037953.1 MGP_BALBcJ_G0020837.1 mouse_genomes_project 13 99169290 99222755 - MGP_BALBcJ_P0037953 Ocln protein_coding protein_coding MGP_BALBcJ_T0037954.1 MGP_BALBcJ_G0020837.1 mouse_genomes_project 13 99181659 99222632 - MGP_BALBcJ_P0037954 Ocln protein_coding protein_coding MGP_BALBcJ_T0036478.1 MGP_BALBcJ_G0020310.1 mouse_genomes_project 13 20794252 20799998 + MGP_BALBcJ_P0036478 Hist1h3b protein_coding protein_coding MGP_BALBcJ_T0036836.1 MGP_BALBcJ_G0020455.1 mouse_genomes_project 13 42309817 42390197 - MGP_BALBcJ_P0036836 Dtnbp1 protein_coding protein_coding MGP_BALBcJ_T0036837.1 MGP_BALBcJ_G0020455.1 mouse_genomes_project 13 42309823 42390197 - MGP_BALBcJ_P0036837 Dtnbp1 protein_coding protein_coding MGP_BALBcJ_T0037361.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61601784 61658755 - MGP_BALBcJ_P0037361 Ptch1 protein_coding protein_coding MGP_BALBcJ_T0037362.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61601785 61666608 - MGP_BALBcJ_P0037362 Ptch1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037363.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61607221 61607952 - Ptch1 protein_coding retained_intron MGP_BALBcJ_T0037364.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61611526 61657011 - MGP_BALBcJ_P0037364 Ptch1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037365.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61636365 61658470 - MGP_BALBcJ_P0037365 Ptch1 protein_coding protein_coding MGP_BALBcJ_T0037366.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61636365 61657522 - MGP_BALBcJ_P0037366 Ptch1 protein_coding protein_coding MGP_BALBcJ_T0037367.1 MGP_BALBcJ_G0020622.1 mouse_genomes_project 13 61636365 61666746 - MGP_BALBcJ_P0037367 Ptch1 protein_coding protein_coding MGP_BALBcJ_T0037585.1 MGP_BALBcJ_G0020728.1 mouse_genomes_project 13 74472920 74475101 - MGP_BALBcJ_P0037585 Gpr150 protein_coding protein_coding MGP_BALBcJ_T0102190.1 MGP_BALBcJ_G0040006.1 mouse_genomes_project 13 19396265 19397036 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037913.1 MGP_BALBcJ_G0020825.1 mouse_genomes_project 13 97793457 97857191 + MGP_BALBcJ_P0037913 Zfp366 protein_coding protein_coding MGP_BALBcJ_T0036133.1 MGP_BALBcJ_G0020144.1 mouse_genomes_project 13 810959 830891 + MGP_BALBcJ_P0036133 Akr1c19 protein_coding protein_coding MGP_BALBcJ_T0036134.1 MGP_BALBcJ_G0020144.1 mouse_genomes_project 13 816002 830890 + MGP_BALBcJ_P0036134 Akr1c19 protein_coding protein_coding MGP_BALBcJ_T0036135.1 MGP_BALBcJ_G0020144.1 mouse_genomes_project 13 827858 831212 + Akr1c19 protein_coding processed_transcript MGP_BALBcJ_T0036649.1 MGP_BALBcJ_G0020387.1 mouse_genomes_project 13 30512362 30523583 + MGP_BALBcJ_P0036649 protein_coding protein_coding MGP_BALBcJ_T0036956.1 MGP_BALBcJ_G0020497.1 mouse_genomes_project 13 48683929 48758107 + MGP_BALBcJ_P0036956 Spin1 protein_coding protein_coding MGP_BALBcJ_T0012899.1 MGP_BALBcJ_G0010996.1 mouse_genomes_project 13 41821345 41822325 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037889.1 MGP_BALBcJ_G0020815.1 mouse_genomes_project 13 96857107 96868066 + MGP_BALBcJ_P0037889 Ankra2 protein_coding protein_coding MGP_BALBcJ_T0037890.1 MGP_BALBcJ_G0020815.1 mouse_genomes_project 13 96857164 96868065 + MGP_BALBcJ_P0037890 Ankra2 protein_coding protein_coding MGP_BALBcJ_T0037891.1 MGP_BALBcJ_G0020815.1 mouse_genomes_project 13 96857167 96868067 + MGP_BALBcJ_P0037891 Ankra2 protein_coding protein_coding MGP_BALBcJ_T0037892.1 MGP_BALBcJ_G0020815.1 mouse_genomes_project 13 96857232 96868899 + MGP_BALBcJ_P0037892 Ankra2 protein_coding protein_coding MGP_BALBcJ_T0037893.1 MGP_BALBcJ_G0020815.1 mouse_genomes_project 13 96862578 96865616 + Ankra2 protein_coding retained_intron MGP_BALBcJ_T0036325.1 MGP_BALBcJ_G0020206.1 mouse_genomes_project 13 16687413 16764399 - MGP_BALBcJ_P0036325 Gpr141 protein_coding protein_coding MGP_BALBcJ_T0037145.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53159640 53174931 - MGP_BALBcJ_P0037145 Dbn1 protein_coding protein_coding MGP_BALBcJ_T0037146.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53159640 53174931 - MGP_BALBcJ_P0037146 Dbn1 protein_coding protein_coding MGP_BALBcJ_T0037147.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53160154 53174522 - MGP_BALBcJ_P0037147 Dbn1 protein_coding protein_coding MGP_BALBcJ_T0037148.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53161335 53174527 - Dbn1 protein_coding retained_intron MGP_BALBcJ_T0037149.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53167586 53168313 - Dbn1 protein_coding retained_intron MGP_BALBcJ_T0037150.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53167608 53168426 - Dbn1 protein_coding retained_intron MGP_BALBcJ_T0037151.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53167675 53178940 - MGP_BALBcJ_P0037151 Dbn1 protein_coding protein_coding MGP_BALBcJ_T0037152.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53167835 53172831 - Dbn1 protein_coding processed_transcript MGP_BALBcJ_T0037153.1 MGP_BALBcJ_G0020549.1 mouse_genomes_project 13 53168448 53170138 - Dbn1 protein_coding retained_intron MGP_BALBcJ_T0036480.1 MGP_BALBcJ_G0020312.1 mouse_genomes_project 13 20807791 20810854 - MGP_BALBcJ_P0036480 Hist1h4a protein_coding protein_coding MGP_BALBcJ_T0036415.1 MGP_BALBcJ_G0020257.1 mouse_genomes_project 13 19114215 19115118 - MGP_BALBcJ_P0036415 Vmn1r192 protein_coding protein_coding MGP_BALBcJ_T0038169.1 MGP_BALBcJ_G0020903.1 mouse_genomes_project 13 112338986 112339767 - MGP_BALBcJ_P0038169 Hspb3 protein_coding protein_coding MGP_BALBcJ_T0006511.1 MGP_BALBcJ_G0005402.1 mouse_genomes_project 13 28436861 28444742 - 4930401O12Rik lincRNA lincRNA MGP_BALBcJ_T0098495.1 MGP_BALBcJ_G0036549.1 mouse_genomes_project 13 43927944 43928022 + Gm24915 rRNA rRNA MGP_BALBcJ_T0037314.1 MGP_BALBcJ_G0020599.1 mouse_genomes_project 13 58364648 58529460 + MGP_BALBcJ_P0037314 Dapk1 protein_coding protein_coding MGP_BALBcJ_T0037315.1 MGP_BALBcJ_G0020599.1 mouse_genomes_project 13 58364912 58529460 + MGP_BALBcJ_P0037315 Dapk1 protein_coding protein_coding MGP_BALBcJ_T0036483.1 MGP_BALBcJ_G0020315.1 mouse_genomes_project 13 20832982 20841872 + MGP_BALBcJ_P0036483 Trim38 protein_coding protein_coding MGP_BALBcJ_T0037011.1 MGP_BALBcJ_G0020515.1 mouse_genomes_project 13 51717223 51754329 + MGP_BALBcJ_P0037011 Sfxn1 protein_coding protein_coding MGP_BALBcJ_T0036147.1 MGP_BALBcJ_G0020150.1 mouse_genomes_project 13 1369452 1432135 + MGP_BALBcJ_P0036147 Gm5444 protein_coding protein_coding MGP_BALBcJ_T0037123.1 MGP_BALBcJ_G0020537.1 mouse_genomes_project 13 52829113 52844667 + MGP_BALBcJ_P0037123 Fgfr4 protein_coding protein_coding MGP_BALBcJ_T0037124.1 MGP_BALBcJ_G0020537.1 mouse_genomes_project 13 52832153 52833144 + Fgfr4 protein_coding processed_transcript MGP_BALBcJ_T0037125.1 MGP_BALBcJ_G0020537.1 mouse_genomes_project 13 52832605 52833393 + Fgfr4 protein_coding retained_intron MGP_BALBcJ_T0006575.1 MGP_BALBcJ_G0005445.1 mouse_genomes_project 13 68121195 68127344 - Gm26819 lincRNA lincRNA MGP_BALBcJ_T0037214.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477038 54601115 - MGP_BALBcJ_P0037214 Trpc7 protein_coding protein_coding MGP_BALBcJ_T0037215.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477038 54601154 - MGP_BALBcJ_P0037215 Trpc7 protein_coding protein_coding MGP_BALBcJ_T0037216.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477193 54601167 - MGP_BALBcJ_P0037216 Trpc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037217.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477691 54600872 - MGP_BALBcJ_P0037217 Trpc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037218.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477691 54600872 - MGP_BALBcJ_P0037218 Trpc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037219.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477691 54600872 - MGP_BALBcJ_P0037219 Trpc7 protein_coding protein_coding MGP_BALBcJ_T0037220.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477691 54600872 - MGP_BALBcJ_P0037220 Trpc7 protein_coding protein_coding MGP_BALBcJ_T0037221.1 MGP_BALBcJ_G0020574.1 mouse_genomes_project 13 54477691 54600872 - MGP_BALBcJ_P0037221 Trpc7 protein_coding protein_coding MGP_BALBcJ_T0036463.1 MGP_BALBcJ_G0020299.1 mouse_genomes_project 13 20606302 20619843 + MGP_BALBcJ_P0036463 Hist1h3d protein_coding protein_coding MGP_BALBcJ_T0002585.1 MGP_BALBcJ_G0002484.1 mouse_genomes_project 13 16261361 16266164 - MGP_BALBcJ_P0002585 Trgv2 TR_V_gene TR_V_gene MGP_BALBcJ_T0037856.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95193047 95215423 - MGP_BALBcJ_P0037856 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037857.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95194356 95211250 - MGP_BALBcJ_P0037857 Hmgcr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037858.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95194523 95196884 - MGP_BALBcJ_P0037858 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037859.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95195434 95211197 - MGP_BALBcJ_P0037859 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037860.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95196201 95201107 - MGP_BALBcJ_P0037860 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037861.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95203369 95215362 - Hmgcr protein_coding retained_intron MGP_BALBcJ_T0037862.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95204635 95215310 - MGP_BALBcJ_P0037862 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037863.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95210191 95211074 - Hmgcr protein_coding retained_intron MGP_BALBcJ_T0037864.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95210601 95214141 - MGP_BALBcJ_P0037864 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037865.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95210606 95214969 - MGP_BALBcJ_P0037865 Hmgcr protein_coding protein_coding MGP_BALBcJ_T0037866.1 MGP_BALBcJ_G0020804.1 mouse_genomes_project 13 95210804 95215335 - Hmgcr protein_coding retained_intron MGP_BALBcJ_T0000889.1 MGP_BALBcJ_G0000820.1 mouse_genomes_project 13 98252705 98253535 + TEC TEC MGP_BALBcJ_T0037316.1 MGP_BALBcJ_G0020600.1 mouse_genomes_project 13 58549403 58553860 - MGP_BALBcJ_P0037316 BC051665 protein_coding protein_coding MGP_BALBcJ_T0036253.1 MGP_BALBcJ_G0020181.1 mouse_genomes_project 13 10669393 10691871 + Gng4 protein_coding processed_transcript MGP_BALBcJ_T0036254.1 MGP_BALBcJ_G0020181.1 mouse_genomes_project 13 10669663 10713684 + MGP_BALBcJ_P0036254 Gng4 protein_coding protein_coding MGP_BALBcJ_T0102217.1 MGP_BALBcJ_G0040033.1 mouse_genomes_project 13 30109397 30112609 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037930.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98741707 98758113 + MGP_BALBcJ_P0037930 Smn1 protein_coding protein_coding MGP_BALBcJ_T0037931.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98741713 98743998 + Smn1 protein_coding retained_intron MGP_BALBcJ_T0037932.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98741713 98744676 + MGP_BALBcJ_P0037932 Smn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037933.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98741749 98757903 + MGP_BALBcJ_P0037933 Smn1 protein_coding protein_coding MGP_BALBcJ_T0037934.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98741779 98751598 + MGP_BALBcJ_P0037934 Smn1 protein_coding protein_coding MGP_BALBcJ_T0037935.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98742980 98743791 + Smn1 protein_coding retained_intron MGP_BALBcJ_T0037936.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98744738 98745494 + Smn1 protein_coding retained_intron MGP_BALBcJ_T0037937.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98751426 98758113 + Smn1 protein_coding retained_intron MGP_BALBcJ_T0037938.1 MGP_BALBcJ_G0020833.1 mouse_genomes_project 13 98755816 98757873 + Smn1 protein_coding retained_intron MGP_BALBcJ_T0037323.1 MGP_BALBcJ_G0020606.1 mouse_genomes_project 13 58695523 58698767 - MGP_BALBcJ_P0037323 Tpbpa protein_coding protein_coding MGP_BALBcJ_T0012940.1 MGP_BALBcJ_G0011037.1 mouse_genomes_project 13 110026999 110027472 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0038144.1 MGP_BALBcJ_G0020888.1 mouse_genomes_project 13 111268797 111322894 - MGP_BALBcJ_P0038144 Ddx4 protein_coding protein_coding MGP_BALBcJ_T0038145.1 MGP_BALBcJ_G0020888.1 mouse_genomes_project 13 111268797 111322894 - MGP_BALBcJ_P0038145 Ddx4 protein_coding protein_coding MGP_BALBcJ_T0012884.1 MGP_BALBcJ_G0010981.1 mouse_genomes_project 13 25728731 25729220 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0009906.1 MGP_BALBcJ_G0008031.1 mouse_genomes_project 13 35358664 35358780 + Gm27387 miRNA miRNA MGP_BALBcJ_T0037829.1 MGP_BALBcJ_G0020789.1 mouse_genomes_project 13 93835886 93849209 + MGP_BALBcJ_P0037829 Zbed3 protein_coding protein_coding MGP_BALBcJ_T0036423.1 MGP_BALBcJ_G0020265.1 mouse_genomes_project 13 19324673 19325612 + MGP_BALBcJ_P0036423 Vmn1r200 protein_coding protein_coding MGP_BALBcJ_T0100627.1 MGP_BALBcJ_G0038663.1 mouse_genomes_project 13 5572084 5572219 - Gm25274 snoRNA snoRNA MGP_BALBcJ_T0009913.1 MGP_BALBcJ_G0008038.1 mouse_genomes_project 13 52234783 52234920 + Gm24195 miRNA miRNA MGP_BALBcJ_T0009939.1 MGP_BALBcJ_G0008064.1 mouse_genomes_project 13 97159945 97160047 + Gm22698 miRNA miRNA MGP_BALBcJ_T0036242.1 MGP_BALBcJ_G0020172.1 mouse_genomes_project 13 9138852 9193571 + MGP_BALBcJ_P0036242 Ero1lb protein_coding protein_coding MGP_BALBcJ_T0009903.1 MGP_BALBcJ_G0008028.1 mouse_genomes_project 13 20986035 20986164 - Gm44344 miRNA miRNA MGP_BALBcJ_T0036892.1 MGP_BALBcJ_G0020477.1 mouse_genomes_project 13 46265482 46335162 - MGP_BALBcJ_P0036892 Phf2 protein_coding protein_coding MGP_BALBcJ_T0100656.1 MGP_BALBcJ_G0038692.1 mouse_genomes_project 13 75017957 75018089 - Gm24519 snoRNA snoRNA MGP_BALBcJ_T0000873.1 MGP_BALBcJ_G0000804.1 mouse_genomes_project 13 39212853 39213316 + TEC TEC MGP_BALBcJ_T0012883.1 MGP_BALBcJ_G0010980.1 mouse_genomes_project 13 24400365 24401319 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003457.1 MGP_BALBcJ_G0003163.1 mouse_genomes_project 13 72329438 72330641 - Gm15912 antisense antisense MGP_BALBcJ_T0037128.1 MGP_BALBcJ_G0020540.1 mouse_genomes_project 13 52997988 53001636 + MGP_BALBcJ_P0037128 Prelid1 protein_coding unknown_likely_coding MGP_BALBcJ_T0037129.1 MGP_BALBcJ_G0020540.1 mouse_genomes_project 13 52998004 53001092 + MGP_BALBcJ_P0037129 Prelid1 protein_coding protein_coding MGP_BALBcJ_T0037228.1 MGP_BALBcJ_G0020576.1 mouse_genomes_project 13 55732703 55845869 - MGP_BALBcJ_P0037228 Klhl3 protein_coding protein_coding MGP_BALBcJ_T0037229.1 MGP_BALBcJ_G0020576.1 mouse_genomes_project 13 55733441 55834831 - MGP_BALBcJ_P0037229 Klhl3 protein_coding protein_coding MGP_BALBcJ_T0003418.1 MGP_BALBcJ_G0003137.1 mouse_genomes_project 13 20845130 20854937 - Gm11337 antisense antisense MGP_BALBcJ_T0098497.1 MGP_BALBcJ_G0036551.1 mouse_genomes_project 13 95438151 95438266 + Gm27792 rRNA rRNA MGP_BALBcJ_T0036546.1 MGP_BALBcJ_G0020333.1 mouse_genomes_project 13 22068204 22090998 - MGP_BALBcJ_P0036546 Mrs2 protein_coding protein_coding MGP_BALBcJ_T0098836.1 MGP_BALBcJ_G0036886.1 mouse_genomes_project 13 61475625 61479349 - Gm16132 sense_intronic sense_intronic MGP_BALBcJ_T0102204.1 MGP_BALBcJ_G0040020.1 mouse_genomes_project 13 19890410 19891312 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099393.1 MGP_BALBcJ_G0037429.1 mouse_genomes_project 13 118463079 118463186 + Gm23308 snRNA snRNA MGP_BALBcJ_T0099372.1 MGP_BALBcJ_G0037408.1 mouse_genomes_project 13 39269832 39269936 + Gm22157 snRNA snRNA MGP_BALBcJ_T0017317.1 MGP_BALBcJ_G0015191.1 mouse_genomes_project 13 32390174 32392657 + 1700011B04Rik processed_transcript retained_intron MGP_BALBcJ_T0017318.1 MGP_BALBcJ_G0015191.1 mouse_genomes_project 13 32391529 32397909 + 1700011B04Rik processed_transcript lincRNA MGP_BALBcJ_T0012859.1 MGP_BALBcJ_G0010956.1 mouse_genomes_project 13 18875424 18876000 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003411.1 MGP_BALBcJ_G0003131.1 mouse_genomes_project 13 16017215 16051003 - Gm43385 antisense antisense MGP_BALBcJ_T0037570.1 MGP_BALBcJ_G0020718.1 mouse_genomes_project 13 72681501 72685930 - MGP_BALBcJ_P0037570 Lrrc14b protein_coding protein_coding MGP_BALBcJ_T0012918.1 MGP_BALBcJ_G0011015.1 mouse_genomes_project 13 72340061 72341403 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098499.1 MGP_BALBcJ_G0036553.1 mouse_genomes_project 13 112076903 112077004 + Gm22385 rRNA rRNA MGP_BALBcJ_T0036527.1 MGP_BALBcJ_G0020326.1 mouse_genomes_project 13 21819474 21829557 - MGP_BALBcJ_P0036527 Gmnn protein_coding protein_coding MGP_BALBcJ_T0036528.1 MGP_BALBcJ_G0020326.1 mouse_genomes_project 13 21819474 21829495 - MGP_BALBcJ_P0036528 Gmnn protein_coding protein_coding MGP_BALBcJ_T0036529.1 MGP_BALBcJ_G0020326.1 mouse_genomes_project 13 21819720 21829110 - MGP_BALBcJ_P0036529 Gmnn protein_coding protein_coding MGP_BALBcJ_T0036530.1 MGP_BALBcJ_G0020326.1 mouse_genomes_project 13 21819817 21829074 - MGP_BALBcJ_P0036530 Gmnn protein_coding protein_coding MGP_BALBcJ_T0036531.1 MGP_BALBcJ_G0020326.1 mouse_genomes_project 13 21821335 21829531 - MGP_BALBcJ_P0036531 Gmnn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037446.1 MGP_BALBcJ_G0020659.1 mouse_genomes_project 13 65494123 65513905 - MGP_BALBcJ_P0037446 Zfp953 protein_coding protein_coding MGP_BALBcJ_T0036577.1 MGP_BALBcJ_G0020349.1 mouse_genomes_project 13 24648321 24655277 - MGP_BALBcJ_P0036577 Prl8a9 protein_coding protein_coding MGP_BALBcJ_T0003410.1 MGP_BALBcJ_G0003130.1 mouse_genomes_project 13 12300049 12301365 - Gm26645 antisense antisense MGP_BALBcJ_T0006571.1 MGP_BALBcJ_G0005442.1 mouse_genomes_project 13 65739914 65748773 + 9430065F17Rik lincRNA lincRNA MGP_BALBcJ_T0006572.1 MGP_BALBcJ_G0005442.1 mouse_genomes_project 13 65739943 65754429 + 9430065F17Rik lincRNA lincRNA MGP_BALBcJ_T0036230.1 MGP_BALBcJ_G0020167.1 mouse_genomes_project 13 8750026 8828651 - MGP_BALBcJ_P0036230 Mtr protein_coding protein_coding MGP_BALBcJ_T0036839.1 MGP_BALBcJ_G0020457.1 mouse_genomes_project 13 42772921 42795288 + MGP_BALBcJ_P0036839 Mylip protein_coding protein_coding MGP_BALBcJ_T0038075.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826304 106863834 + MGP_BALBcJ_P0038075 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038076.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826311 106831821 + Ercc8 protein_coding retained_intron MGP_BALBcJ_T0038077.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826311 106863451 + MGP_BALBcJ_P0038077 Ercc8 protein_coding protein_coding MGP_BALBcJ_T0038078.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826311 106845787 + MGP_BALBcJ_P0038078 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038079.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826311 106842787 + MGP_BALBcJ_P0038079 Ercc8 protein_coding protein_coding MGP_BALBcJ_T0038080.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826327 106863451 + MGP_BALBcJ_P0038080 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038081.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826344 106863443 + MGP_BALBcJ_P0038081 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038082.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826348 106841296 + MGP_BALBcJ_P0038082 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038083.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826376 106852439 + MGP_BALBcJ_P0038083 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038084.1 MGP_BALBcJ_G0020874.1 mouse_genomes_project 13 106826377 106847203 + MGP_BALBcJ_P0038084 Ercc8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006503.1 MGP_BALBcJ_G0005397.1 mouse_genomes_project 13 24379479 24392009 + 4930511O05Rik lincRNA lincRNA MGP_BALBcJ_T0038113.1 MGP_BALBcJ_G0020879.1 mouse_genomes_project 13 109002945 109007653 - MGP_BALBcJ_P0038113 Gapt protein_coding protein_coding MGP_BALBcJ_T0037589.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 74806897 75437963 + MGP_BALBcJ_P0037589 Mctp1 protein_coding protein_coding MGP_BALBcJ_T0037590.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 74993610 75177694 + MGP_BALBcJ_P0037590 Mctp1 protein_coding protein_coding MGP_BALBcJ_T0037591.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 74993664 75148270 + MGP_BALBcJ_P0037591 Mctp1 protein_coding protein_coding MGP_BALBcJ_T0037592.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 74993697 75436114 + MGP_BALBcJ_P0037592 Mctp1 protein_coding protein_coding MGP_BALBcJ_T0037593.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 75139088 75245194 + Mctp1 protein_coding retained_intron MGP_BALBcJ_T0037594.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 75241566 75244435 + Mctp1 protein_coding retained_intron MGP_BALBcJ_T0037595.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 75241805 75436901 + Mctp1 protein_coding retained_intron MGP_BALBcJ_T0037596.1 MGP_BALBcJ_G0020731.1 mouse_genomes_project 13 75241842 75244637 + Mctp1 protein_coding retained_intron MGP_BALBcJ_T0037397.1 MGP_BALBcJ_G0020635.1 mouse_genomes_project 13 63106767 63111682 + MGP_BALBcJ_P0037397 Spata31d1c protein_coding protein_coding MGP_BALBcJ_T0036395.1 MGP_BALBcJ_G0020246.1 mouse_genomes_project 13 18746214 18746644 - MGP_BALBcJ_P0036395 Hist1h4n protein_coding protein_coding MGP_BALBcJ_T0012939.1 MGP_BALBcJ_G0011036.1 mouse_genomes_project 13 108960879 108961608 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037769.1 MGP_BALBcJ_G0020770.1 mouse_genomes_project 13 91226438 91269805 - MGP_BALBcJ_P0037769 Thbs4 protein_coding protein_coding MGP_BALBcJ_T0037770.1 MGP_BALBcJ_G0020770.1 mouse_genomes_project 13 91248070 91249886 - Thbs4 protein_coding retained_intron MGP_BALBcJ_T0003433.1 MGP_BALBcJ_G0003150.1 mouse_genomes_project 13 51866910 51870495 - Gm16578 antisense antisense MGP_BALBcJ_T0006625.1 MGP_BALBcJ_G0005482.1 mouse_genomes_project 13 113294884 113385434 + 4930544M13Rik lincRNA lincRNA MGP_BALBcJ_T0006626.1 MGP_BALBcJ_G0005482.1 mouse_genomes_project 13 113294884 113344198 + 4930544M13Rik lincRNA lincRNA MGP_BALBcJ_T0003487.1 MGP_BALBcJ_G0003179.1 mouse_genomes_project 13 110224491 110231825 - Gm15288 antisense antisense MGP_BALBcJ_T0036407.1 MGP_BALBcJ_G0020252.1 mouse_genomes_project 13 18924190 18931759 - MGP_BALBcJ_P0036407 Prss16 protein_coding protein_coding MGP_BALBcJ_T0036408.1 MGP_BALBcJ_G0020252.1 mouse_genomes_project 13 18924574 18927237 - Prss16 protein_coding processed_transcript MGP_BALBcJ_T0036409.1 MGP_BALBcJ_G0020252.1 mouse_genomes_project 13 18924940 18928433 - Prss16 protein_coding processed_transcript MGP_BALBcJ_T0036410.1 MGP_BALBcJ_G0020252.1 mouse_genomes_project 13 18929249 18931760 - Prss16 protein_coding processed_transcript MGP_BALBcJ_T0003475.1 MGP_BALBcJ_G0003172.1 mouse_genomes_project 13 96913176 96914059 + Gm9828 antisense antisense MGP_BALBcJ_T0003476.1 MGP_BALBcJ_G0003172.1 mouse_genomes_project 13 96913823 96919148 + Gm9828 antisense antisense MGP_BALBcJ_T0003477.1 MGP_BALBcJ_G0003172.1 mouse_genomes_project 13 96913870 96921516 + Gm9828 antisense antisense MGP_BALBcJ_T0003478.1 MGP_BALBcJ_G0003172.1 mouse_genomes_project 13 96915814 96918654 + Gm9828 antisense antisense MGP_BALBcJ_T0037138.1 MGP_BALBcJ_G0020545.1 mouse_genomes_project 13 53092626 53093040 - MGP_BALBcJ_P0037138 Pfn3 protein_coding protein_coding MGP_BALBcJ_T0037208.1 MGP_BALBcJ_G0020573.1 mouse_genomes_project 13 54414987 54447283 + MGP_BALBcJ_P0037208 Smad5 protein_coding protein_coding MGP_BALBcJ_T0037209.1 MGP_BALBcJ_G0020573.1 mouse_genomes_project 13 54415016 54438134 + Smad5 protein_coding processed_transcript MGP_BALBcJ_T0037210.1 MGP_BALBcJ_G0020573.1 mouse_genomes_project 13 54415029 54444866 + MGP_BALBcJ_P0037210 Smad5 protein_coding protein_coding MGP_BALBcJ_T0037211.1 MGP_BALBcJ_G0020573.1 mouse_genomes_project 13 54415043 54438045 + Smad5 protein_coding processed_transcript MGP_BALBcJ_T0037212.1 MGP_BALBcJ_G0020573.1 mouse_genomes_project 13 54415526 54445210 + MGP_BALBcJ_P0037212 Smad5 protein_coding protein_coding MGP_BALBcJ_T0037213.1 MGP_BALBcJ_G0020573.1 mouse_genomes_project 13 54437936 54443901 + Smad5 protein_coding processed_transcript MGP_BALBcJ_T0006542.1 MGP_BALBcJ_G0005424.1 mouse_genomes_project 13 43357623 43358879 + 5033430I15Rik lincRNA lincRNA MGP_BALBcJ_T0006543.1 MGP_BALBcJ_G0005424.1 mouse_genomes_project 13 43357721 43358548 + 5033430I15Rik lincRNA lincRNA MGP_BALBcJ_T0037801.1 MGP_BALBcJ_G0020782.1 mouse_genomes_project 13 92693770 92777966 - MGP_BALBcJ_P0037801 Scamp1 protein_coding protein_coding MGP_BALBcJ_T0037802.1 MGP_BALBcJ_G0020782.1 mouse_genomes_project 13 92717798 92758322 - MGP_BALBcJ_P0037802 Scamp1 protein_coding protein_coding MGP_BALBcJ_T0102005.1 MGP_BALBcJ_G0039845.1 mouse_genomes_project 13 110382812 110385649 - unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0037305.1 MGP_BALBcJ_G0020594.1 mouse_genomes_project 13 57500072 57504151 - MGP_BALBcJ_P0037305 1700014D04Rik protein_coding protein_coding MGP_BALBcJ_T0037306.1 MGP_BALBcJ_G0020594.1 mouse_genomes_project 13 57501185 57501980 - MGP_BALBcJ_P0037306 1700014D04Rik protein_coding protein_coding MGP_BALBcJ_T0037307.1 MGP_BALBcJ_G0020594.1 mouse_genomes_project 13 57502936 57505983 - MGP_BALBcJ_P0037307 1700014D04Rik protein_coding protein_coding MGP_BALBcJ_T0003414.1 MGP_BALBcJ_G0003134.1 mouse_genomes_project 13 18936444 18937346 + Gm11290 antisense antisense MGP_BALBcJ_T0003415.1 MGP_BALBcJ_G0003134.1 mouse_genomes_project 13 18936444 18937324 + Gm11290 antisense antisense MGP_BALBcJ_T0036620.1 MGP_BALBcJ_G0020371.1 mouse_genomes_project 13 28791132 28793785 + MGP_BALBcJ_P0036620 Foxq1 protein_coding protein_coding MGP_BALBcJ_T0037771.1 MGP_BALBcJ_G0020771.1 mouse_genomes_project 13 91316884 91330328 + MGP_BALBcJ_P0037771 Mtx3 protein_coding protein_coding MGP_BALBcJ_T0036193.1 MGP_BALBcJ_G0020161.1 mouse_genomes_project 13 5590302 5614482 - MGP_BALBcJ_P0036193 Gtpbp4 protein_coding protein_coding MGP_BALBcJ_T0036772.1 MGP_BALBcJ_G0020432.1 mouse_genomes_project 13 38363012 38369597 + MGP_BALBcJ_P0036772 Tmem14c protein_coding protein_coding MGP_BALBcJ_T0011325.1 MGP_BALBcJ_G0009450.1 mouse_genomes_project 13 10674678 10674968 + Gm25271 misc_RNA misc_RNA MGP_BALBcJ_T0003484.1 MGP_BALBcJ_G0003176.1 mouse_genomes_project 13 103353626 103364006 + 2610204G07Rik antisense antisense MGP_BALBcJ_T0037488.1 MGP_BALBcJ_G0020686.1 mouse_genomes_project 13 67883576 67920263 - MGP_BALBcJ_P0037488 Srd5a1 protein_coding protein_coding MGP_BALBcJ_T0037489.1 MGP_BALBcJ_G0020686.1 mouse_genomes_project 13 67902243 67920169 - Srd5a1 protein_coding processed_transcript MGP_BALBcJ_T0036894.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46504250 46614646 - MGP_BALBcJ_P0036894 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036895.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46504250 46614646 - MGP_BALBcJ_P0036895 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036896.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46504250 46614644 - MGP_BALBcJ_P0036896 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036897.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46504250 46614646 - MGP_BALBcJ_P0036897 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036898.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46504256 46613864 - MGP_BALBcJ_P0036898 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036899.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46504257 46613864 - MGP_BALBcJ_P0036899 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036900.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46505556 46528354 - MGP_BALBcJ_P0036900 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036901.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46505567 46545501 - MGP_BALBcJ_P0036901 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036902.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46505928 46614646 - MGP_BALBcJ_P0036902 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036903.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46506821 46614646 - MGP_BALBcJ_P0036903 Wnk2 protein_coding protein_coding MGP_BALBcJ_T0036904.1 MGP_BALBcJ_G0020479.1 mouse_genomes_project 13 46528799 46538473 - MGP_BALBcJ_P0036904 Wnk2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012849.1 MGP_BALBcJ_G0010946.1 mouse_genomes_project 13 8950036 8950493 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036764.1 MGP_BALBcJ_G0020430.1 mouse_genomes_project 13 38204819 38308909 + MGP_BALBcJ_P0036764 Gcnt2 protein_coding protein_coding MGP_BALBcJ_T0036765.1 MGP_BALBcJ_G0020430.1 mouse_genomes_project 13 38234554 38308909 + MGP_BALBcJ_P0036765 Gcnt2 protein_coding protein_coding MGP_BALBcJ_T0036766.1 MGP_BALBcJ_G0020430.1 mouse_genomes_project 13 38265619 38308909 + MGP_BALBcJ_P0036766 Gcnt2 protein_coding protein_coding MGP_BALBcJ_T0037994.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101411096 102016583 - MGP_BALBcJ_P0037994 Mast4 protein_coding protein_coding MGP_BALBcJ_T0037995.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101411101 102016851 - MGP_BALBcJ_P0037995 Mast4 protein_coding protein_coding MGP_BALBcJ_T0037996.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101413401 101775197 - MGP_BALBcJ_P0037996 Mast4 protein_coding protein_coding MGP_BALBcJ_T0037997.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101413620 101581108 - MGP_BALBcJ_P0037997 Mast4 protein_coding protein_coding MGP_BALBcJ_T0037998.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101413620 101634413 - MGP_BALBcJ_P0037998 Mast4 protein_coding protein_coding MGP_BALBcJ_T0037999.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101420983 101580788 - MGP_BALBcJ_P0037999 Mast4 protein_coding protein_coding MGP_BALBcJ_T0038000.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101433144 101634295 - MGP_BALBcJ_P0038000 Mast4 protein_coding protein_coding MGP_BALBcJ_T0038001.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101447731 101451996 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0038002.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101459212 101463447 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0038003.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101475501 101775180 - MGP_BALBcJ_P0038003 Mast4 protein_coding protein_coding MGP_BALBcJ_T0038004.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101478280 101482292 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0038005.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101526901 102016851 - MGP_BALBcJ_P0038005 Mast4 protein_coding protein_coding MGP_BALBcJ_T0038006.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101528057 101581077 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0038007.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101697438 102016853 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0038008.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101736310 102016888 - Mast4 protein_coding processed_transcript MGP_BALBcJ_T0038009.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101748501 102016842 - Mast4 protein_coding processed_transcript MGP_BALBcJ_T0038010.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 101772527 101775196 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0038011.1 MGP_BALBcJ_G0020850.1 mouse_genomes_project 13 102015362 102016883 - Mast4 protein_coding retained_intron MGP_BALBcJ_T0099373.1 MGP_BALBcJ_G0037409.1 mouse_genomes_project 13 40799595 40799704 - Gm26064 snRNA snRNA MGP_BALBcJ_T0036694.1 MGP_BALBcJ_G0020403.1 mouse_genomes_project 13 32096024 32123813 + MGP_BALBcJ_P0036694 Prpf4b protein_coding protein_coding MGP_BALBcJ_T0037577.1 MGP_BALBcJ_G0020724.1 mouse_genomes_project 13 74252925 74263135 + MGP_BALBcJ_P0037577 Glrx protein_coding protein_coding MGP_BALBcJ_T0006544.1 MGP_BALBcJ_G0005425.1 mouse_genomes_project 13 45401979 45467682 - 4931429P17Rik lincRNA lincRNA MGP_BALBcJ_T0036422.1 MGP_BALBcJ_G0020264.1 mouse_genomes_project 13 19311821 19312925 + MGP_BALBcJ_P0036422 Vmn1r199 protein_coding protein_coding MGP_BALBcJ_T0036429.1 MGP_BALBcJ_G0020271.1 mouse_genomes_project 13 19809878 19810799 - MGP_BALBcJ_P0036429 Vmn1r210 protein_coding protein_coding MGP_BALBcJ_T0000893.1 MGP_BALBcJ_G0000824.1 mouse_genomes_project 13 100446309 100446709 - TEC TEC MGP_BALBcJ_T0036388.1 MGP_BALBcJ_G0020242.1 mouse_genomes_project 13 18700005 18700942 - MGP_BALBcJ_P0036388 Hist1h2an protein_coding protein_coding MGP_BALBcJ_T0038224.1 MGP_BALBcJ_G0020930.1 mouse_genomes_project 13 118480642 118481370 - MGP_BALBcJ_P0038224 Gm21731 protein_coding protein_coding MGP_BALBcJ_T0038225.1 MGP_BALBcJ_G0020930.1 mouse_genomes_project 13 118480770 118481360 - MGP_BALBcJ_P0038225 Gm21731 protein_coding protein_coding MGP_BALBcJ_T0006586.1 MGP_BALBcJ_G0005453.1 mouse_genomes_project 13 82174469 82327678 + lincRNA lincRNA MGP_BALBcJ_T0006587.1 MGP_BALBcJ_G0005453.1 mouse_genomes_project 13 82174469 82197600 + lincRNA lincRNA MGP_BALBcJ_T0006589.1 MGP_BALBcJ_G0005453.1 mouse_genomes_project 13 82181170 82191961 + lincRNA lincRNA MGP_BALBcJ_T0006590.1 MGP_BALBcJ_G0005453.1 mouse_genomes_project 13 82188868 82191813 + lincRNA lincRNA MGP_BALBcJ_T0006591.1 MGP_BALBcJ_G0005453.1 mouse_genomes_project 13 82195154 82339201 + lincRNA lincRNA MGP_BALBcJ_T0102231.1 MGP_BALBcJ_G0040047.1 mouse_genomes_project 13 56153551 56155402 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0012906.1 MGP_BALBcJ_G0011003.1 mouse_genomes_project 13 61538742 61539078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012912.1 MGP_BALBcJ_G0011009.1 mouse_genomes_project 13 65872543 65918411 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037743.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90687819 90831737 - MGP_BALBcJ_P0037743 Msh3 protein_coding protein_coding MGP_BALBcJ_T0037744.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90687827 90717718 - Msh3 protein_coding processed_transcript MGP_BALBcJ_T0037745.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90687828 90746923 - Msh3 protein_coding retained_intron MGP_BALBcJ_T0037746.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90687829 90831741 - MGP_BALBcJ_P0037746 Msh3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037747.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90687833 90726662 - Msh3 protein_coding retained_intron MGP_BALBcJ_T0037748.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90687833 90831745 - MGP_BALBcJ_P0037748 Msh3 protein_coding protein_coding MGP_BALBcJ_T0037749.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90688204 90712183 - MGP_BALBcJ_P0037749 Msh3 protein_coding protein_coding MGP_BALBcJ_T0037750.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90726442 90831727 - MGP_BALBcJ_P0037750 Msh3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037752.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90782714 90784675 - Msh3 protein_coding retained_intron MGP_BALBcJ_T0037753.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90784397 90831738 - MGP_BALBcJ_P0037753 Msh3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037754.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90787831 90822440 - Msh3 protein_coding retained_intron MGP_BALBcJ_T0037755.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90817709 90831257 - Msh3 protein_coding processed_transcript MGP_BALBcJ_T0037756.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90822930 90831695 - Msh3 protein_coding retained_intron MGP_BALBcJ_T0037757.1 MGP_BALBcJ_G0020762.1 mouse_genomes_project 13 90827859 90831727 - MGP_BALBcJ_P0037757 Msh3 protein_coding protein_coding MGP_BALBcJ_T0037804.1 MGP_BALBcJ_G0020784.1 mouse_genomes_project 13 92852099 93061366 + MGP_BALBcJ_P0037804 Ap3b1 protein_coding protein_coding MGP_BALBcJ_T0037805.1 MGP_BALBcJ_G0020784.1 mouse_genomes_project 13 92852243 93061371 + MGP_BALBcJ_P0037805 Ap3b1 protein_coding unknown_likely_coding MGP_BALBcJ_T0037476.1 MGP_BALBcJ_G0020677.1 mouse_genomes_project 13 66122414 66144152 + MGP_BALBcJ_P0037476 Zfp273 protein_coding protein_coding MGP_BALBcJ_T0038136.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111129219 111174772 + MGP_BALBcJ_P0038136 Il6st protein_coding protein_coding MGP_BALBcJ_T0038137.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111129246 111149040 + MGP_BALBcJ_P0038137 Il6st protein_coding protein_coding MGP_BALBcJ_T0038138.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111129375 111169967 + MGP_BALBcJ_P0038138 Il6st protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038139.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111132726 111145340 + MGP_BALBcJ_P0038139 Il6st protein_coding protein_coding MGP_BALBcJ_T0038140.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111140362 111169181 + MGP_BALBcJ_P0038140 Il6st protein_coding protein_coding MGP_BALBcJ_T0038141.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111140362 111169867 + MGP_BALBcJ_P0038141 Il6st protein_coding protein_coding MGP_BALBcJ_T0038142.1 MGP_BALBcJ_G0020886.1 mouse_genomes_project 13 111140362 111169181 + MGP_BALBcJ_P0038142 Il6st protein_coding protein_coding MGP_BALBcJ_T0038197.1 MGP_BALBcJ_G0020918.1 mouse_genomes_project 13 117436149 117559416 + Fgf10 protein_coding processed_transcript MGP_BALBcJ_T0038198.1 MGP_BALBcJ_G0020918.1 mouse_genomes_project 13 117436182 117551669 + Fgf10 protein_coding processed_transcript MGP_BALBcJ_T0038199.1 MGP_BALBcJ_G0020918.1 mouse_genomes_project 13 117484531 117562237 + MGP_BALBcJ_P0038199 Fgf10 protein_coding protein_coding MGP_BALBcJ_T0036398.1 MGP_BALBcJ_G0020249.1 mouse_genomes_project 13 18747473 20788497 - MGP_BALBcJ_P0036398 protein_coding protein_coding MGP_BALBcJ_T0012867.1 MGP_BALBcJ_G0010964.1 mouse_genomes_project 13 20300053 20300201 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036369.1 MGP_BALBcJ_G0020227.1 mouse_genomes_project 13 18448352 18449339 - MGP_BALBcJ_P0036369 protein_coding protein_coding MGP_BALBcJ_T0036255.1 MGP_BALBcJ_G0020182.1 mouse_genomes_project 13 10830044 10875339 + MGP_BALBcJ_P0036255 B3galnt2 protein_coding protein_coding MGP_BALBcJ_T0009886.1 MGP_BALBcJ_G0008011.1 mouse_genomes_project 13 2413036 2413125 - Gm26043 miRNA miRNA MGP_BALBcJ_T0006517.1 MGP_BALBcJ_G0005407.1 mouse_genomes_project 13 28607672 28639652 - Gm11375 lincRNA lincRNA MGP_BALBcJ_T0006518.1 MGP_BALBcJ_G0005407.1 mouse_genomes_project 13 28638094 28639694 - Gm11375 lincRNA lincRNA MGP_BALBcJ_T0037170.1 MGP_BALBcJ_G0020555.1 mouse_genomes_project 13 53286341 53297589 + MGP_BALBcJ_P0037170 B4galt7 protein_coding protein_coding MGP_BALBcJ_T0037171.1 MGP_BALBcJ_G0020555.1 mouse_genomes_project 13 53286510 53295164 + B4galt7 protein_coding retained_intron MGP_BALBcJ_T0037172.1 MGP_BALBcJ_G0020555.1 mouse_genomes_project 13 53286510 53295948 + MGP_BALBcJ_P0037172 B4galt7 protein_coding protein_coding MGP_BALBcJ_T0037173.1 MGP_BALBcJ_G0020555.1 mouse_genomes_project 13 53286510 53297588 + MGP_BALBcJ_P0037173 B4galt7 protein_coding protein_coding MGP_BALBcJ_T0017309.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25687318 25739275 - processed_transcript processed_transcript MGP_BALBcJ_T0017310.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25688062 26116054 - processed_transcript processed_transcript MGP_BALBcJ_T0017311.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25688062 25701617 - processed_transcript processed_transcript MGP_BALBcJ_T0017312.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25688225 25734955 - processed_transcript processed_transcript MGP_BALBcJ_T0017313.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25722903 25735114 - processed_transcript processed_transcript MGP_BALBcJ_T0017314.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25783426 26113403 - processed_transcript processed_transcript MGP_BALBcJ_T0017315.1 MGP_BALBcJ_G0015189.1 mouse_genomes_project 13 25891161 26115291 - processed_transcript processed_transcript MGP_BALBcJ_T0037198.1 MGP_BALBcJ_G0020566.1 mouse_genomes_project 13 53988936 53996841 - MGP_BALBcJ_P0037198 Cxcl14 protein_coding protein_coding MGP_BALBcJ_T0099357.1 MGP_BALBcJ_G0037393.1 mouse_genomes_project 13 11496128 11496241 - Gm25444 snRNA snRNA MGP_BALBcJ_T0036342.1 MGP_BALBcJ_G0020215.1 mouse_genomes_project 13 18214674 18222066 + MGP_BALBcJ_P0036342 Gpx6 protein_coding protein_coding MGP_BALBcJ_T0036343.1 MGP_BALBcJ_G0020215.1 mouse_genomes_project 13 18219705 18222070 + Gpx6 protein_coding processed_transcript MGP_BALBcJ_T0003424.1 MGP_BALBcJ_G0003142.1 mouse_genomes_project 13 29028947 29031987 + Gm11379 antisense antisense MGP_BALBcJ_T0036960.1 MGP_BALBcJ_G0020501.1 mouse_genomes_project 13 49252838 49258267 + MGP_BALBcJ_P0036960 Cks2 protein_coding protein_coding MGP_BALBcJ_T0012848.1 MGP_BALBcJ_G0010945.1 mouse_genomes_project 13 8498712 8499698 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037478.1 MGP_BALBcJ_G0020679.1 mouse_genomes_project 13 66181399 66181997 + MGP_BALBcJ_P0037478 BC048507 protein_coding protein_coding MGP_BALBcJ_T0006595.1 MGP_BALBcJ_G0005458.1 mouse_genomes_project 13 92415133 92417159 - Gm26527 lincRNA lincRNA MGP_BALBcJ_T0037166.1 MGP_BALBcJ_G0020551.1 mouse_genomes_project 13 53210297 53215625 - MGP_BALBcJ_P0037166 Dok3 protein_coding protein_coding MGP_BALBcJ_T0036437.1 MGP_BALBcJ_G0020279.1 mouse_genomes_project 13 20084056 20084953 + MGP_BALBcJ_P0036437 Vmn1r218 protein_coding protein_coding MGP_BALBcJ_T0037909.1 MGP_BALBcJ_G0020823.1 mouse_genomes_project 13 97460993 97547279 - MGP_BALBcJ_P0037909 Tnpo1 protein_coding protein_coding MGP_BALBcJ_T0037910.1 MGP_BALBcJ_G0020823.1 mouse_genomes_project 13 97465688 97508326 - MGP_BALBcJ_P0037910 Tnpo1 protein_coding protein_coding MGP_BALBcJ_T0037911.1 MGP_BALBcJ_G0020823.1 mouse_genomes_project 13 97492965 97508342 - MGP_BALBcJ_P0037911 Tnpo1 protein_coding protein_coding MGP_BALBcJ_T0037685.1 MGP_BALBcJ_G0020747.1 mouse_genomes_project 13 84497514 84499144 - MGP_BALBcJ_P0037685 Cox7c protein_coding protein_coding MGP_BALBcJ_T0037686.1 MGP_BALBcJ_G0020747.1 mouse_genomes_project 13 84497514 84499946 - MGP_BALBcJ_P0037686 Cox7c protein_coding protein_coding MGP_BALBcJ_T0037687.1 MGP_BALBcJ_G0020747.1 mouse_genomes_project 13 84497519 84499031 - MGP_BALBcJ_P0037687 Cox7c protein_coding protein_coding MGP_BALBcJ_T0037688.1 MGP_BALBcJ_G0020747.1 mouse_genomes_project 13 84497593 84499816 - Cox7c protein_coding processed_transcript MGP_BALBcJ_T0037405.1 MGP_BALBcJ_G0020640.1 mouse_genomes_project 13 63254752 63279042 - MGP_BALBcJ_P0037405 Nlrp4f protein_coding protein_coding MGP_BALBcJ_T0036385.1 MGP_BALBcJ_G0020239.1 mouse_genomes_project 13 18670212 18670669 - MGP_BALBcJ_P0036385 Hist1h2ak protein_coding protein_coding MGP_BALBcJ_T0036112.1 MGP_BALBcJ_G0020133.1 mouse_genomes_project 13 129757 178315 - MGP_BALBcJ_P0036112 Fam208b protein_coding protein_coding MGP_BALBcJ_T0102216.1 MGP_BALBcJ_G0040032.1 mouse_genomes_project 13 24781612 24794444 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036981.1 MGP_BALBcJ_G0020505.1 mouse_genomes_project 13 49461688 49463479 + MGP_BALBcJ_P0036981 Gadd45g protein_coding protein_coding MGP_BALBcJ_T0036982.1 MGP_BALBcJ_G0020505.1 mouse_genomes_project 13 49461754 49463235 + Gadd45g protein_coding retained_intron MGP_BALBcJ_T0036784.1 MGP_BALBcJ_G0020439.1 mouse_genomes_project 13 38655028 38834554 - MGP_BALBcJ_P0036784 Nedd9 protein_coding protein_coding MGP_BALBcJ_T0036785.1 MGP_BALBcJ_G0020439.1 mouse_genomes_project 13 38655028 38705130 - MGP_BALBcJ_P0036785 Nedd9 protein_coding protein_coding MGP_BALBcJ_T0037453.1 MGP_BALBcJ_G0020665.1 mouse_genomes_project 13 65653664 65670772 - MGP_BALBcJ_P0037453 Zfp874a protein_coding protein_coding MGP_BALBcJ_T0036749.1 MGP_BALBcJ_G0020421.1 mouse_genomes_project 13 35474515 35497098 + MGP_BALBcJ_P0036749 Snrnp48 protein_coding protein_coding MGP_BALBcJ_T0036750.1 MGP_BALBcJ_G0020421.1 mouse_genomes_project 13 35474527 35496357 + MGP_BALBcJ_P0036750 Snrnp48 protein_coding protein_coding MGP_BALBcJ_T0037440.1 MGP_BALBcJ_G0020655.1 mouse_genomes_project 13 65417029 65432486 - MGP_BALBcJ_P0037440 Zfp458 protein_coding protein_coding MGP_BALBcJ_T0037803.1 MGP_BALBcJ_G0020783.1 mouse_genomes_project 13 92847966 92851958 - MGP_BALBcJ_P0037803 Gm9776 protein_coding protein_coding MGP_BALBcJ_T0037763.1 MGP_BALBcJ_G0020767.1 mouse_genomes_project 13 90964608 91009000 - MGP_BALBcJ_P0037763 Zfyve16 protein_coding protein_coding MGP_BALBcJ_T0037764.1 MGP_BALBcJ_G0020767.1 mouse_genomes_project 13 90965347 90994954 - Zfyve16 protein_coding retained_intron MGP_BALBcJ_T0037765.1 MGP_BALBcJ_G0020767.1 mouse_genomes_project 13 90986205 90987519 - Zfyve16 protein_coding retained_intron MGP_BALBcJ_T0037766.1 MGP_BALBcJ_G0020767.1 mouse_genomes_project 13 90991666 90999488 - Zfyve16 protein_coding processed_transcript MGP_BALBcJ_T0012916.1 MGP_BALBcJ_G0011013.1 mouse_genomes_project 13 68321666 68322077 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036140.1 MGP_BALBcJ_G0020147.1 mouse_genomes_project 13 1066263 1101455 - MGP_BALBcJ_P0036140 Akr1c20 protein_coding protein_coding MGP_BALBcJ_T0036141.1 MGP_BALBcJ_G0020147.1 mouse_genomes_project 13 1085327 1101470 - MGP_BALBcJ_P0036141 Akr1c20 protein_coding protein_coding MGP_BALBcJ_T0100631.1 MGP_BALBcJ_G0038667.1 mouse_genomes_project 13 10172407 10172595 + Gm25804 snoRNA snoRNA MGP_BALBcJ_T0017302.1 MGP_BALBcJ_G0015182.1 mouse_genomes_project 13 18336160 18341529 + 4930470G03Rik processed_transcript processed_transcript MGP_BALBcJ_T0037498.1 MGP_BALBcJ_G0020690.1 mouse_genomes_project 13 69057433 69178263 - MGP_BALBcJ_P0037498 Adamts16 protein_coding protein_coding MGP_BALBcJ_T0037499.1 MGP_BALBcJ_G0020690.1 mouse_genomes_project 13 69057441 69178227 - MGP_BALBcJ_P0037499 Adamts16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037500.1 MGP_BALBcJ_G0020690.1 mouse_genomes_project 13 69091011 69178263 - MGP_BALBcJ_P0037500 Adamts16 protein_coding protein_coding MGP_BALBcJ_T0037501.1 MGP_BALBcJ_G0020690.1 mouse_genomes_project 13 69170721 69178260 - Adamts16 protein_coding retained_intron MGP_BALBcJ_T0009919.1 MGP_BALBcJ_G0008044.1 mouse_genomes_project 13 56138116 56138224 - Mir7-1 miRNA miRNA MGP_BALBcJ_T0012895.1 MGP_BALBcJ_G0010992.1 mouse_genomes_project 13 30807080 30807427 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036716.1 MGP_BALBcJ_G0020409.1 mouse_genomes_project 13 33126000 33138879 - MGP_BALBcJ_P0036716 Rpp40 protein_coding protein_coding MGP_BALBcJ_T0036717.1 MGP_BALBcJ_G0020409.1 mouse_genomes_project 13 33129221 33131386 - MGP_BALBcJ_P0036717 Rpp40 protein_coding protein_coding MGP_BALBcJ_T0036718.1 MGP_BALBcJ_G0020409.1 mouse_genomes_project 13 33129229 33138848 - Rpp40 protein_coding retained_intron MGP_BALBcJ_T0036719.1 MGP_BALBcJ_G0020409.1 mouse_genomes_project 13 33129232 33138864 - MGP_BALBcJ_P0036719 Rpp40 protein_coding protein_coding MGP_BALBcJ_T0037841.1 MGP_BALBcJ_G0020798.1 mouse_genomes_project 13 94605703 94606552 + Gm17190 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0037842.1 MGP_BALBcJ_G0020798.1 mouse_genomes_project 13 94605772 94607116 + MGP_BALBcJ_P0037842 Gm17190 protein_coding protein_coding MGP_BALBcJ_T0036418.1 MGP_BALBcJ_G0020260.1 mouse_genomes_project 13 19197046 19197997 + MGP_BALBcJ_P0036418 Vmn1r195 protein_coding protein_coding MGP_BALBcJ_T0037707.1 MGP_BALBcJ_G0020751.1 mouse_genomes_project 13 88248592 88556628 - MGP_BALBcJ_P0037707 Xrcc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037708.1 MGP_BALBcJ_G0020751.1 mouse_genomes_project 13 88331723 88556713 - MGP_BALBcJ_P0037708 Xrcc4 protein_coding protein_coding MGP_BALBcJ_T0037709.1 MGP_BALBcJ_G0020751.1 mouse_genomes_project 13 88529611 88556641 - MGP_BALBcJ_P0037709 Xrcc4 protein_coding protein_coding MGP_BALBcJ_T0037710.1 MGP_BALBcJ_G0020751.1 mouse_genomes_project 13 88529646 88556187 - MGP_BALBcJ_P0037710 Xrcc4 protein_coding protein_coding MGP_BALBcJ_T0038215.1 MGP_BALBcJ_G0020923.1 mouse_genomes_project 13 118222517 118229657 + MGP_BALBcJ_P0038215 protein_coding protein_coding MGP_BALBcJ_T0012882.1 MGP_BALBcJ_G0010979.1 mouse_genomes_project 13 24392688 24393029 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037852.1 MGP_BALBcJ_G0020802.1 mouse_genomes_project 13 95036209 95036597 + MGP_BALBcJ_P0037852 Gm17622 protein_coding protein_coding MGP_BALBcJ_T0037154.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53182567 53200565 - MGP_BALBcJ_P0037154 Pdlim7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037155.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53184259 53200561 - Pdlim7 protein_coding retained_intron MGP_BALBcJ_T0037156.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53185177 53193173 - MGP_BALBcJ_P0037156 Pdlim7 protein_coding unknown_likely_coding MGP_BALBcJ_T0037157.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53185181 53200564 - Pdlim7 protein_coding retained_intron MGP_BALBcJ_T0037158.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53185185 53200573 - MGP_BALBcJ_P0037158 Pdlim7 protein_coding protein_coding MGP_BALBcJ_T0037159.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53193532 53200565 - MGP_BALBcJ_P0037159 Pdlim7 protein_coding protein_coding MGP_BALBcJ_T0037160.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53193533 53200565 - MGP_BALBcJ_P0037160 Pdlim7 protein_coding protein_coding MGP_BALBcJ_T0037161.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53193533 53200561 - MGP_BALBcJ_P0037161 Pdlim7 protein_coding protein_coding MGP_BALBcJ_T0037162.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53194311 53196147 - Pdlim7 protein_coding retained_intron MGP_BALBcJ_T0037163.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53194992 53200803 - MGP_BALBcJ_P0037163 Pdlim7 protein_coding protein_coding MGP_BALBcJ_T0037164.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53195936 53200548 - Pdlim7 protein_coding retained_intron MGP_BALBcJ_T0037165.1 MGP_BALBcJ_G0020550.1 mouse_genomes_project 13 53196092 53199836 - MGP_BALBcJ_P0037165 Pdlim7 protein_coding protein_coding MGP_BALBcJ_T0037299.1 MGP_BALBcJ_G0020589.1 mouse_genomes_project 13 57387957 57428857 - MGP_BALBcJ_P0037299 Golm1 protein_coding protein_coding MGP_BALBcJ_T0037300.1 MGP_BALBcJ_G0020589.1 mouse_genomes_project 13 57387957 57428857 - MGP_BALBcJ_P0037300 Golm1 protein_coding protein_coding MGP_BALBcJ_T0037697.1 MGP_BALBcJ_G0020749.1 mouse_genomes_project 13 88010637 88083091 + MGP_BALBcJ_P0037697 Hapln1 protein_coding protein_coding MGP_BALBcJ_T0011328.1 MGP_BALBcJ_G0009453.1 mouse_genomes_project 13 36192746 36192974 - Gm22035 misc_RNA misc_RNA MGP_BALBcJ_T0012852.1 MGP_BALBcJ_G0010949.1 mouse_genomes_project 13 16922629 16924919 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100650.1 MGP_BALBcJ_G0038686.1 mouse_genomes_project 13 63237482 63237633 + Gm24130 snoRNA snoRNA MGP_BALBcJ_T0006501.1 MGP_BALBcJ_G0005396.1 mouse_genomes_project 13 23355051 23384479 - 1700092E19Rik lincRNA lincRNA MGP_BALBcJ_T0006502.1 MGP_BALBcJ_G0005396.1 mouse_genomes_project 13 23377886 23384420 - 1700092E19Rik lincRNA lincRNA MGP_BALBcJ_T0037548.1 MGP_BALBcJ_G0020711.1 mouse_genomes_project 13 72357763 72383554 - MGP_BALBcJ_P0037548 Cep72 protein_coding protein_coding MGP_BALBcJ_T0102194.1 MGP_BALBcJ_G0040010.1 mouse_genomes_project 13 19573950 19574675 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0101621.1 MGP_BALBcJ_G0039635.1 mouse_genomes_project 13 21658844 21666467 - transcribed_processed_pseudogene retained_intron MGP_BALBcJ_T0101622.1 MGP_BALBcJ_G0039635.1 mouse_genomes_project 13 21659580 21660284 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101623.1 MGP_BALBcJ_G0039635.1 mouse_genomes_project 13 21660024 21666297 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101624.1 MGP_BALBcJ_G0039635.1 mouse_genomes_project 13 21660121 21666238 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0012942.1 MGP_BALBcJ_G0011039.1 mouse_genomes_project 13 110541906 110543693 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037003.1 MGP_BALBcJ_G0020510.1 mouse_genomes_project 13 50748604 50926308 - MGP_BALBcJ_P0037003 Ror2 protein_coding protein_coding MGP_BALBcJ_T0037004.1 MGP_BALBcJ_G0020510.1 mouse_genomes_project 13 50748609 50926883 - MGP_BALBcJ_P0037004 Ror2 protein_coding protein_coding MGP_BALBcJ_T0037005.1 MGP_BALBcJ_G0020510.1 mouse_genomes_project 13 50771388 50916129 - Ror2 protein_coding processed_transcript MGP_BALBcJ_T0037581.1 MGP_BALBcJ_G0020726.1 mouse_genomes_project 13 74379415 74419486 + MGP_BALBcJ_P0037581 Spata9 protein_coding protein_coding MGP_BALBcJ_T0009902.1 MGP_BALBcJ_G0008027.1 mouse_genomes_project 13 20793365 20793503 - Gm44484 miRNA miRNA MGP_BALBcJ_T0003447.1 MGP_BALBcJ_G0003157.1 mouse_genomes_project 13 65212346 66028940 + antisense antisense MGP_BALBcJ_T0003449.1 MGP_BALBcJ_G0003157.1 mouse_genomes_project 13 65991069 66030850 + antisense antisense MGP_BALBcJ_T0003450.1 MGP_BALBcJ_G0003157.1 mouse_genomes_project 13 66014338 66031974 + antisense antisense MGP_BALBcJ_T0102185.1 MGP_BALBcJ_G0040001.1 mouse_genomes_project 13 18983613 18984129 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037427.1 MGP_BALBcJ_G0020649.1 mouse_genomes_project 13 65206994 65220058 - MGP_BALBcJ_P0037427 protein_coding protein_coding MGP_BALBcJ_T0037431.1 MGP_BALBcJ_G0020649.1 mouse_genomes_project 13 65206997 65220091 - MGP_BALBcJ_P0037431 protein_coding protein_coding MGP_BALBcJ_T0036591.1 MGP_BALBcJ_G0020359.1 mouse_genomes_project 13 26179781 26184576 - MGP_BALBcJ_P0036591 Sox4 protein_coding protein_coding MGP_BALBcJ_T0037436.1 MGP_BALBcJ_G0020652.1 mouse_genomes_project 13 65267353 65280743 + MGP_BALBcJ_P0037436 Zfp759 protein_coding protein_coding MGP_BALBcJ_T0102189.1 MGP_BALBcJ_G0040005.1 mouse_genomes_project 13 19314932 19315818 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003486.1 MGP_BALBcJ_G0003178.1 mouse_genomes_project 13 105495697 105497594 + Gm28988 antisense antisense MGP_BALBcJ_T0006630.1 MGP_BALBcJ_G0005484.1 mouse_genomes_project 13 118313863 118315398 + 1700074H08Rik lincRNA lincRNA MGP_BALBcJ_T0037465.1 MGP_BALBcJ_G0020670.1 mouse_genomes_project 13 65779179 65799426 - MGP_BALBcJ_P0037465 Zfp729b protein_coding protein_coding MGP_BALBcJ_T0037617.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79536378 79783555 - MGP_BALBcJ_P0037617 Adgrv1 protein_coding protein_coding MGP_BALBcJ_T0037618.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79536378 80070005 - MGP_BALBcJ_P0037618 Adgrv1 protein_coding protein_coding MGP_BALBcJ_T0037619.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79536379 79887441 - MGP_BALBcJ_P0037619 Adgrv1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037620.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79536693 80032113 - MGP_BALBcJ_P0037620 Adgrv1 protein_coding unknown_likely_coding MGP_BALBcJ_T0037621.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79548244 79783076 - Adgrv1 protein_coding processed_transcript MGP_BALBcJ_T0037622.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79943853 80013526 - MGP_BALBcJ_P0037622 Adgrv1 protein_coding protein_coding MGP_BALBcJ_T0037623.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79943854 80027777 - Adgrv1 protein_coding retained_intron MGP_BALBcJ_T0037624.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79943854 79974893 - Adgrv1 protein_coding retained_intron MGP_BALBcJ_T0037625.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79983405 79986498 - Adgrv1 protein_coding retained_intron MGP_BALBcJ_T0037626.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 79999275 80001591 - Adgrv1 protein_coding retained_intron MGP_BALBcJ_T0037627.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 80003050 80069990 - MGP_BALBcJ_P0037627 Adgrv1 protein_coding protein_coding MGP_BALBcJ_T0037628.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 80020307 80069990 - MGP_BALBcJ_P0037628 Adgrv1 protein_coding protein_coding MGP_BALBcJ_T0037629.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 80021922 80069992 - MGP_BALBcJ_P0037629 Adgrv1 protein_coding protein_coding MGP_BALBcJ_T0037630.1 MGP_BALBcJ_G0020738.1 mouse_genomes_project 13 80024222 80027002 - Adgrv1 protein_coding retained_intron MGP_BALBcJ_T0036498.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21063752 21158787 - MGP_BALBcJ_P0036498 Lrrc16a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036499.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21063892 21073965 - MGP_BALBcJ_P0036499 Lrrc16a protein_coding protein_coding MGP_BALBcJ_T0036500.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21064067 21331218 - MGP_BALBcJ_P0036500 Lrrc16a protein_coding protein_coding MGP_BALBcJ_T0036501.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21064469 21331150 - MGP_BALBcJ_P0036501 Lrrc16a protein_coding protein_coding MGP_BALBcJ_T0036502.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21084959 21108435 - Lrrc16a protein_coding processed_transcript MGP_BALBcJ_T0036503.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21113054 21149529 - Lrrc16a protein_coding retained_intron MGP_BALBcJ_T0036504.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21158762 21163025 - Lrrc16a protein_coding processed_transcript MGP_BALBcJ_T0036505.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21187621 21331217 - Lrrc16a protein_coding retained_intron MGP_BALBcJ_T0036506.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21189153 21205074 - Lrrc16a protein_coding processed_transcript MGP_BALBcJ_T0036507.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21205301 21330920 - MGP_BALBcJ_P0036507 Lrrc16a protein_coding protein_coding MGP_BALBcJ_T0036508.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21214726 21256489 - MGP_BALBcJ_P0036508 Lrrc16a protein_coding protein_coding MGP_BALBcJ_T0036509.1 MGP_BALBcJ_G0020323.1 mouse_genomes_project 13 21223607 21289916 - Lrrc16a protein_coding processed_transcript MGP_BALBcJ_T0036472.1 MGP_BALBcJ_G0020306.1 mouse_genomes_project 13 20746635 20753009 - MGP_BALBcJ_P0036472 Hfe protein_coding protein_coding MGP_BALBcJ_T0036473.1 MGP_BALBcJ_G0020306.1 mouse_genomes_project 13 20746635 20753009 - MGP_BALBcJ_P0036473 Hfe protein_coding protein_coding MGP_BALBcJ_T0036474.1 MGP_BALBcJ_G0020306.1 mouse_genomes_project 13 20746635 20753009 - MGP_BALBcJ_P0036474 Hfe protein_coding protein_coding MGP_BALBcJ_T0036689.1 MGP_BALBcJ_G0020401.1 mouse_genomes_project 13 31845781 31870390 - MGP_BALBcJ_P0036689 Pxdc1 protein_coding protein_coding MGP_BALBcJ_T0036690.1 MGP_BALBcJ_G0020401.1 mouse_genomes_project 13 31845781 31870400 - MGP_BALBcJ_P0036690 Pxdc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036691.1 MGP_BALBcJ_G0020401.1 mouse_genomes_project 13 31845782 31870400 - MGP_BALBcJ_P0036691 Pxdc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036692.1 MGP_BALBcJ_G0020401.1 mouse_genomes_project 13 31846815 31866295 - MGP_BALBcJ_P0036692 Pxdc1 protein_coding protein_coding MGP_BALBcJ_T0102225.1 MGP_BALBcJ_G0040041.1 mouse_genomes_project 13 30973427 30977207 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0038206.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118161739 118190709 + MGP_BALBcJ_P0038206 Paip1 protein_coding protein_coding MGP_BALBcJ_T0038207.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118161936 118189810 + MGP_BALBcJ_P0038207 Paip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038208.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118161950 118189591 + MGP_BALBcJ_P0038208 Paip1 protein_coding protein_coding MGP_BALBcJ_T0038209.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118161950 118189696 + MGP_BALBcJ_P0038209 Paip1 protein_coding protein_coding MGP_BALBcJ_T0038210.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118161975 118182741 + MGP_BALBcJ_P0038210 Paip1 protein_coding protein_coding MGP_BALBcJ_T0038211.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118173626 118189529 + MGP_BALBcJ_P0038211 Paip1 protein_coding protein_coding MGP_BALBcJ_T0038212.1 MGP_BALBcJ_G0020920.1 mouse_genomes_project 13 118182230 118183753 + Paip1 protein_coding retained_intron MGP_BALBcJ_T0037334.1 MGP_BALBcJ_G0020616.1 mouse_genomes_project 13 60608293 60610605 - MGP_BALBcJ_P0037334 protein_coding protein_coding MGP_BALBcJ_T0037344.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61391399 61531519 - MGP_BALBcJ_P0037344 Fancc protein_coding protein_coding MGP_BALBcJ_T0037345.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61398219 61531498 - MGP_BALBcJ_P0037345 Fancc protein_coding protein_coding MGP_BALBcJ_T0037346.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61398434 61404097 - Fancc protein_coding processed_transcript MGP_BALBcJ_T0037347.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61398435 61531499 - MGP_BALBcJ_P0037347 Fancc protein_coding protein_coding MGP_BALBcJ_T0037348.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61398815 61531468 - MGP_BALBcJ_P0037348 Fancc protein_coding protein_coding MGP_BALBcJ_T0037349.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61399176 61411910 - Fancc protein_coding processed_transcript MGP_BALBcJ_T0037350.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61403201 61531496 - Fancc protein_coding retained_intron MGP_BALBcJ_T0037351.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61408190 61418754 - Fancc protein_coding processed_transcript MGP_BALBcJ_T0037352.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61417428 61449720 - Fancc protein_coding processed_transcript MGP_BALBcJ_T0037353.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61417428 61531519 - Fancc protein_coding retained_intron MGP_BALBcJ_T0037354.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61427612 61496453 - MGP_BALBcJ_P0037354 Fancc protein_coding protein_coding MGP_BALBcJ_T0037355.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61444917 61531031 - MGP_BALBcJ_P0037355 Fancc protein_coding protein_coding MGP_BALBcJ_T0037356.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61444968 61504513 - MGP_BALBcJ_P0037356 Fancc protein_coding protein_coding MGP_BALBcJ_T0037357.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61444977 61496580 - Fancc protein_coding retained_intron MGP_BALBcJ_T0037358.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61445007 61590555 - MGP_BALBcJ_P0037358 Fancc protein_coding protein_coding MGP_BALBcJ_T0037359.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61501228 61531457 - MGP_BALBcJ_P0037359 Fancc protein_coding protein_coding MGP_BALBcJ_T0037360.1 MGP_BALBcJ_G0020621.1 mouse_genomes_project 13 61501285 61509242 - MGP_BALBcJ_P0037360 Fancc protein_coding protein_coding MGP_BALBcJ_T0037791.1 MGP_BALBcJ_G0020779.1 mouse_genomes_project 13 92138740 92220106 + MGP_BALBcJ_P0037791 Dmgdh protein_coding protein_coding MGP_BALBcJ_T0037792.1 MGP_BALBcJ_G0020779.1 mouse_genomes_project 13 92176956 92177589 + Dmgdh protein_coding processed_transcript MGP_BALBcJ_T0006599.1 MGP_BALBcJ_G0005462.1 mouse_genomes_project 13 95987605 96051178 + Lncenc1 lincRNA lincRNA MGP_BALBcJ_T0006600.1 MGP_BALBcJ_G0005462.1 mouse_genomes_project 13 96036448 96051178 + Lncenc1 lincRNA lincRNA MGP_BALBcJ_T0006601.1 MGP_BALBcJ_G0005462.1 mouse_genomes_project 13 96036702 96043451 + Lncenc1 lincRNA lincRNA MGP_BALBcJ_T0036452.1 MGP_BALBcJ_G0020288.1 mouse_genomes_project 13 20561285 20561793 + MGP_BALBcJ_P0036452 Hist1h2af protein_coding protein_coding MGP_BALBcJ_T0036578.1 MGP_BALBcJ_G0020350.1 mouse_genomes_project 13 24664591 24672993 - MGP_BALBcJ_P0036578 Prl8a1 protein_coding protein_coding MGP_BALBcJ_T0036579.1 MGP_BALBcJ_G0020350.1 mouse_genomes_project 13 24665101 24672993 - MGP_BALBcJ_P0036579 Prl8a1 protein_coding protein_coding MGP_BALBcJ_T0036700.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32199303 32217718 - MGP_BALBcJ_P0036700 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036701.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32199304 32217701 - MGP_BALBcJ_P0036701 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036702.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32199305 32217718 - MGP_BALBcJ_P0036702 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036703.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32199312 32217706 - MGP_BALBcJ_P0036703 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036704.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32200257 32212408 - Eci2 protein_coding processed_transcript MGP_BALBcJ_T0036705.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32201811 32213151 - Eci2 protein_coding processed_transcript MGP_BALBcJ_T0036706.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32209481 32211942 - Eci2 protein_coding retained_intron MGP_BALBcJ_T0036707.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32209549 32246301 - MGP_BALBcJ_P0036707 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036708.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32209550 32246301 - MGP_BALBcJ_P0036708 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036709.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32209550 32217706 - MGP_BALBcJ_P0036709 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036710.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32209551 32217697 - MGP_BALBcJ_P0036710 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036711.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32210998 32217696 - MGP_BALBcJ_P0036711 Eci2 protein_coding protein_coding MGP_BALBcJ_T0036712.1 MGP_BALBcJ_G0020407.1 mouse_genomes_project 13 32213837 32217036 - MGP_BALBcJ_P0036712 Eci2 protein_coding protein_coding MGP_BALBcJ_T0006608.1 MGP_BALBcJ_G0005467.1 mouse_genomes_project 13 97690094 97700506 - 2310020H05Rik lincRNA lincRNA MGP_BALBcJ_T0012898.1 MGP_BALBcJ_G0010995.1 mouse_genomes_project 13 38119743 38120371 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037787.1 MGP_BALBcJ_G0020776.1 mouse_genomes_project 13 92081599 92088014 - MGP_BALBcJ_P0037787 Gm5096 protein_coding protein_coding MGP_BALBcJ_T0011331.1 MGP_BALBcJ_G0009456.1 mouse_genomes_project 13 48600420 48600546 + Gm22199 misc_RNA misc_RNA MGP_BALBcJ_T0037733.1 MGP_BALBcJ_G0020759.1 mouse_genomes_project 13 90290717 90299969 - Zcchc9 protein_coding retained_intron MGP_BALBcJ_T0037734.1 MGP_BALBcJ_G0020759.1 mouse_genomes_project 13 90291311 90298398 - MGP_BALBcJ_P0037734 Zcchc9 protein_coding protein_coding MGP_BALBcJ_T0037735.1 MGP_BALBcJ_G0020759.1 mouse_genomes_project 13 90293010 90299925 - Zcchc9 protein_coding retained_intron MGP_BALBcJ_T0037736.1 MGP_BALBcJ_G0020759.1 mouse_genomes_project 13 90294666 90295177 - Zcchc9 protein_coding retained_intron MGP_BALBcJ_T0006533.1 MGP_BALBcJ_G0005417.1 mouse_genomes_project 13 36244258 36249940 - Gm26514 lincRNA lincRNA MGP_BALBcJ_T0036655.1 MGP_BALBcJ_G0020392.1 mouse_genomes_project 13 31126935 31143718 - MGP_BALBcJ_P0036655 Serpinb6c protein_coding protein_coding MGP_BALBcJ_T0036656.1 MGP_BALBcJ_G0020392.1 mouse_genomes_project 13 31126936 31144256 - MGP_BALBcJ_P0036656 Serpinb6c protein_coding protein_coding MGP_BALBcJ_T0036293.1 MGP_BALBcJ_G0020194.1 mouse_genomes_project 13 14531384 14535077 + MGP_BALBcJ_P0036293 Mplkip protein_coding protein_coding MGP_BALBcJ_T0011339.1 MGP_BALBcJ_G0009464.1 mouse_genomes_project 13 100929583 100929867 + Gm25808 misc_RNA misc_RNA MGP_BALBcJ_T0009931.1 MGP_BALBcJ_G0008056.1 mouse_genomes_project 13 82195105 82195177 + Mir9-2 miRNA miRNA MGP_BALBcJ_T0038114.1 MGP_BALBcJ_G0020880.1 mouse_genomes_project 13 109045774 109051680 + MGP_BALBcJ_P0038114 Plk2 protein_coding protein_coding MGP_BALBcJ_T0006623.1 MGP_BALBcJ_G0005480.1 mouse_genomes_project 13 110652484 110656487 + Gm15322 lincRNA lincRNA MGP_BALBcJ_T0037869.1 MGP_BALBcJ_G0020807.1 mouse_genomes_project 13 95611815 95675975 + MGP_BALBcJ_P0037869 Fam169a protein_coding protein_coding MGP_BALBcJ_T0037870.1 MGP_BALBcJ_G0020807.1 mouse_genomes_project 13 95616173 95675975 + MGP_BALBcJ_P0037870 Fam169a protein_coding protein_coding MGP_BALBcJ_T0037318.1 MGP_BALBcJ_G0020602.1 mouse_genomes_project 13 58604972 58626211 - MGP_BALBcJ_P0037318 4930486L24Rik protein_coding protein_coding MGP_BALBcJ_T0012927.1 MGP_BALBcJ_G0011024.1 mouse_genomes_project 13 86586655 86587451 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036698.1 MGP_BALBcJ_G0020406.1 mouse_genomes_project 13 32167913 32185369 - MGP_BALBcJ_P0036698 Eci3 protein_coding protein_coding MGP_BALBcJ_T0036699.1 MGP_BALBcJ_G0020406.1 mouse_genomes_project 13 32169221 32185347 - MGP_BALBcJ_P0036699 Eci3 protein_coding protein_coding MGP_BALBcJ_T0012886.1 MGP_BALBcJ_G0010983.1 mouse_genomes_project 13 26361927 26362436 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036137.1 MGP_BALBcJ_G0020146.1 mouse_genomes_project 13 1019650 1042942 + MGP_BALBcJ_P0036137 Akr1c6 protein_coding protein_coding MGP_BALBcJ_T0036138.1 MGP_BALBcJ_G0020146.1 mouse_genomes_project 13 1019776 1020391 + Akr1c6 protein_coding processed_transcript MGP_BALBcJ_T0036139.1 MGP_BALBcJ_G0020146.1 mouse_genomes_project 13 1021490 1034923 + MGP_BALBcJ_P0036139 Akr1c6 protein_coding protein_coding MGP_BALBcJ_T0037612.1 MGP_BALBcJ_G0020737.1 mouse_genomes_project 13 79305466 79311726 + Arrdc3 protein_coding retained_intron MGP_BALBcJ_T0037613.1 MGP_BALBcJ_G0020737.1 mouse_genomes_project 13 79305492 79318118 + MGP_BALBcJ_P0037613 Arrdc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037614.1 MGP_BALBcJ_G0020737.1 mouse_genomes_project 13 79305732 79318118 + MGP_BALBcJ_P0037614 Arrdc3 protein_coding protein_coding MGP_BALBcJ_T0037615.1 MGP_BALBcJ_G0020737.1 mouse_genomes_project 13 79312186 79313335 + Arrdc3 protein_coding retained_intron MGP_BALBcJ_T0037616.1 MGP_BALBcJ_G0020737.1 mouse_genomes_project 13 79312600 79313725 + Arrdc3 protein_coding retained_intron MGP_BALBcJ_T0017316.1 MGP_BALBcJ_G0015190.1 mouse_genomes_project 13 31870641 31884499 + Gm15908 processed_transcript processed_transcript MGP_BALBcJ_T0012854.1 MGP_BALBcJ_G0010951.1 mouse_genomes_project 13 18198254 18198725 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036618.1 MGP_BALBcJ_G0020369.1 mouse_genomes_project 13 28203277 28205050 + MGP_BALBcJ_P0036618 Gm5447 protein_coding protein_coding MGP_BALBcJ_T0036773.1 MGP_BALBcJ_G0020433.1 mouse_genomes_project 13 38372141 38421149 - MGP_BALBcJ_P0036773 Mak protein_coding protein_coding MGP_BALBcJ_T0036774.1 MGP_BALBcJ_G0020433.1 mouse_genomes_project 13 38372141 38411906 - MGP_BALBcJ_P0036774 Mak protein_coding protein_coding MGP_BALBcJ_T0036775.1 MGP_BALBcJ_G0020433.1 mouse_genomes_project 13 38372141 38421149 - MGP_BALBcJ_P0036775 Mak protein_coding protein_coding MGP_BALBcJ_T0036547.1 MGP_BALBcJ_G0020334.1 mouse_genomes_project 13 22121542 22187451 + MGP_BALBcJ_P0036547 Dcdc2a protein_coding protein_coding MGP_BALBcJ_T0036548.1 MGP_BALBcJ_G0020334.1 mouse_genomes_project 13 22121791 22285672 + MGP_BALBcJ_P0036548 Dcdc2a protein_coding protein_coding MGP_BALBcJ_T0036549.1 MGP_BALBcJ_G0020334.1 mouse_genomes_project 13 22162277 22185334 + Dcdc2a protein_coding processed_transcript MGP_BALBcJ_T0036550.1 MGP_BALBcJ_G0020334.1 mouse_genomes_project 13 22258033 22280079 + Dcdc2a protein_coding processed_transcript MGP_BALBcJ_T0037844.1 MGP_BALBcJ_G0020800.1 mouse_genomes_project 13 94961817 94982477 - Ankdd1b protein_coding processed_transcript MGP_BALBcJ_T0037845.1 MGP_BALBcJ_G0020800.1 mouse_genomes_project 13 94962129 95016907 - MGP_BALBcJ_P0037845 Ankdd1b protein_coding protein_coding MGP_BALBcJ_T0037846.1 MGP_BALBcJ_G0020800.1 mouse_genomes_project 13 94962440 94981838 - Ankdd1b protein_coding retained_intron MGP_BALBcJ_T0037847.1 MGP_BALBcJ_G0020800.1 mouse_genomes_project 13 94962778 94981804 - MGP_BALBcJ_P0037847 Ankdd1b protein_coding protein_coding MGP_BALBcJ_T0037848.1 MGP_BALBcJ_G0020800.1 mouse_genomes_project 13 94981795 94991553 - Ankdd1b protein_coding retained_intron MGP_BALBcJ_T0037849.1 MGP_BALBcJ_G0020800.1 mouse_genomes_project 13 94989875 95016945 - MGP_BALBcJ_P0037849 Ankdd1b protein_coding protein_coding MGP_BALBcJ_T0036438.1 MGP_BALBcJ_G0020280.1 mouse_genomes_project 13 20113122 20114227 + MGP_BALBcJ_P0036438 Vmn1r219 protein_coding protein_coding MGP_BALBcJ_T0036846.1 MGP_BALBcJ_G0020460.1 mouse_genomes_project 13 43579537 43595102 - MGP_BALBcJ_P0036846 Gm10113 protein_coding protein_coding MGP_BALBcJ_T0017322.1 MGP_BALBcJ_G0015194.1 mouse_genomes_project 13 67919318 67923722 - Gm17108 processed_transcript processed_transcript MGP_BALBcJ_T0003430.1 MGP_BALBcJ_G0003147.1 mouse_genomes_project 13 40160752 40166258 - Gm15810 antisense antisense MGP_BALBcJ_T0012900.1 MGP_BALBcJ_G0010997.1 mouse_genomes_project 13 42564112 42565115 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036614.1 MGP_BALBcJ_G0020366.1 mouse_genomes_project 13 27975837 27993531 + MGP_BALBcJ_P0036614 Irf4 protein_coding protein_coding MGP_BALBcJ_T0036615.1 MGP_BALBcJ_G0020366.1 mouse_genomes_project 13 27975837 27993531 + MGP_BALBcJ_P0036615 Irf4 protein_coding protein_coding MGP_BALBcJ_T0017327.1 MGP_BALBcJ_G0015198.1 mouse_genomes_project 13 110247376 110312660 + Gm15286 processed_transcript processed_transcript MGP_BALBcJ_T0017328.1 MGP_BALBcJ_G0015198.1 mouse_genomes_project 13 110284371 110310665 + Gm15286 processed_transcript processed_transcript MGP_BALBcJ_T0099389.1 MGP_BALBcJ_G0037425.1 mouse_genomes_project 13 102311491 102311598 + Gm24870 snRNA snRNA MGP_BALBcJ_T0006492.1 MGP_BALBcJ_G0005388.1 mouse_genomes_project 13 9203143 9254288 - lincRNA lincRNA MGP_BALBcJ_T0036696.1 MGP_BALBcJ_G0020405.1 mouse_genomes_project 13 32145600 32176977 + MGP_BALBcJ_P0036696 4933417A18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036697.1 MGP_BALBcJ_G0020405.1 mouse_genomes_project 13 32145600 32174299 + MGP_BALBcJ_P0036697 4933417A18Rik protein_coding protein_coding MGP_BALBcJ_T0006573.1 MGP_BALBcJ_G0005443.1 mouse_genomes_project 13 65813091 65815940 - lincRNA lincRNA MGP_BALBcJ_T0036381.1 MGP_BALBcJ_G0020235.1 mouse_genomes_project 13 18623488 18625281 + MGP_BALBcJ_P0036381 Hist1h2ai protein_coding protein_coding MGP_BALBcJ_T0037786.1 MGP_BALBcJ_G0020775.1 mouse_genomes_project 13 91898688 91966305 - MGP_BALBcJ_P0037786 Jmy protein_coding protein_coding MGP_BALBcJ_T0006524.1 MGP_BALBcJ_G0005411.1 mouse_genomes_project 13 29615564 29619344 - Gm11381 lincRNA lincRNA MGP_BALBcJ_T0006499.1 MGP_BALBcJ_G0005394.1 mouse_genomes_project 13 21693452 21700102 - C530050E15Rik lincRNA lincRNA MGP_BALBcJ_T0037322.1 MGP_BALBcJ_G0020605.1 mouse_genomes_project 13 58690661 58693132 - MGP_BALBcJ_P0037322 Ctla2a protein_coding protein_coding MGP_BALBcJ_T0098496.1 MGP_BALBcJ_G0036550.1 mouse_genomes_project 13 50598888 50599000 - n-R5s54 rRNA rRNA MGP_BALBcJ_T0009927.1 MGP_BALBcJ_G0008052.1 mouse_genomes_project 13 61387889 61387974 - Mir3074-1 miRNA miRNA MGP_BALBcJ_T0038184.1 MGP_BALBcJ_G0020909.1 mouse_genomes_project 13 113648009 113797220 - MGP_BALBcJ_P0038184 Itga1 protein_coding protein_coding MGP_BALBcJ_T0037098.1 MGP_BALBcJ_G0020533.1 mouse_genomes_project 13 52675141 52690476 - MGP_BALBcJ_P0037098 Hk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037099.1 MGP_BALBcJ_G0020533.1 mouse_genomes_project 13 52675217 52690084 - MGP_BALBcJ_P0037099 Hk3 protein_coding protein_coding MGP_BALBcJ_T0037100.1 MGP_BALBcJ_G0020533.1 mouse_genomes_project 13 52675320 52690424 - MGP_BALBcJ_P0037100 Hk3 protein_coding protein_coding MGP_BALBcJ_T0037101.1 MGP_BALBcJ_G0020533.1 mouse_genomes_project 13 52684192 52690477 - MGP_BALBcJ_P0037101 Hk3 protein_coding protein_coding MGP_BALBcJ_T0037102.1 MGP_BALBcJ_G0020533.1 mouse_genomes_project 13 52684242 52690502 - MGP_BALBcJ_P0037102 Hk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037103.1 MGP_BALBcJ_G0020533.1 mouse_genomes_project 13 52684930 52690397 - MGP_BALBcJ_P0037103 Hk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0012936.1 MGP_BALBcJ_G0011033.1 mouse_genomes_project 13 102080530 102081232 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0012931.1 MGP_BALBcJ_G0011028.1 mouse_genomes_project 13 92192430 92192759 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006525.1 MGP_BALBcJ_G0005412.1 mouse_genomes_project 13 32185540 32214038 + Gm16984 lincRNA lincRNA MGP_BALBcJ_T0006526.1 MGP_BALBcJ_G0005412.1 mouse_genomes_project 13 32185563 32204767 + Gm16984 lincRNA lincRNA MGP_BALBcJ_T0006527.1 MGP_BALBcJ_G0005412.1 mouse_genomes_project 13 32185616 32213721 + Gm16984 lincRNA lincRNA MGP_BALBcJ_T0037668.1 MGP_BALBcJ_G0020744.1 mouse_genomes_project 13 82681981 82755722 + MGP_BALBcJ_P0037668 Tmem161b protein_coding protein_coding MGP_BALBcJ_T0099355.1 MGP_BALBcJ_G0037391.1 mouse_genomes_project 13 10136411 10136511 - Gm26133 snRNA snRNA MGP_BALBcJ_T0036542.1 MGP_BALBcJ_G0020331.1 mouse_genomes_project 13 21974332 22004175 - MGP_BALBcJ_P0036542 Aldh5a1 protein_coding protein_coding MGP_BALBcJ_T0100640.1 MGP_BALBcJ_G0038676.1 mouse_genomes_project 13 42224582 42224701 - Gm22213 snoRNA snoRNA MGP_BALBcJ_T0099379.1 MGP_BALBcJ_G0037415.1 mouse_genomes_project 13 58684592 58684691 + Gm24594 snRNA snRNA MGP_BALBcJ_T0037236.1 MGP_BALBcJ_G0020581.1 mouse_genomes_project 13 56020445 56092187 - MGP_BALBcJ_P0037236 Kif27 protein_coding unknown_likely_coding MGP_BALBcJ_T0102212.1 MGP_BALBcJ_G0040028.1 mouse_genomes_project 13 20269557 20270157 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006549.1 MGP_BALBcJ_G0005429.1 mouse_genomes_project 13 46435324 46439084 + Fam120aos lincRNA lincRNA MGP_BALBcJ_T0036445.1 MGP_BALBcJ_G0020284.1 mouse_genomes_project 13 20448643 20450967 - MGP_BALBcJ_P0036445 Abt1 protein_coding protein_coding MGP_BALBcJ_T0037504.1 MGP_BALBcJ_G0020693.1 mouse_genomes_project 13 70940169 70947268 + MGP_BALBcJ_P0037504 Irx2 protein_coding protein_coding MGP_BALBcJ_T0037505.1 MGP_BALBcJ_G0020693.1 mouse_genomes_project 13 70940320 70943795 + Irx2 protein_coding processed_transcript MGP_BALBcJ_T0037506.1 MGP_BALBcJ_G0020693.1 mouse_genomes_project 13 70942894 70943950 + MGP_BALBcJ_P0037506 Irx2 protein_coding protein_coding MGP_BALBcJ_T0037507.1 MGP_BALBcJ_G0020693.1 mouse_genomes_project 13 70945154 70946683 + Irx2 protein_coding retained_intron MGP_BALBcJ_T0037508.1 MGP_BALBcJ_G0020693.1 mouse_genomes_project 13 70945666 70946840 + MGP_BALBcJ_P0037508 Irx2 protein_coding protein_coding MGP_BALBcJ_T0006519.1 MGP_BALBcJ_G0005408.1 mouse_genomes_project 13 28797563 28806374 + Gm11377 lincRNA lincRNA MGP_BALBcJ_T0006612.1 MGP_BALBcJ_G0005471.1 mouse_genomes_project 13 99524289 99652437 + Gm29502 lincRNA lincRNA MGP_BALBcJ_T0038149.1 MGP_BALBcJ_G0020891.1 mouse_genomes_project 13 111541075 111600293 - MGP_BALBcJ_P0038149 Skiv2l2 protein_coding protein_coding MGP_BALBcJ_T0101627.1 MGP_BALBcJ_G0039637.1 mouse_genomes_project 13 101837737 101842013 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0037689.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270327 87651978 + MGP_BALBcJ_P0037689 Edil3 protein_coding protein_coding MGP_BALBcJ_T0037690.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270343 87587644 + Edil3 protein_coding processed_transcript MGP_BALBcJ_T0037691.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270366 87776238 + MGP_BALBcJ_P0037691 Edil3 protein_coding protein_coding MGP_BALBcJ_T0037692.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270412 87430664 + Edil3 protein_coding retained_intron MGP_BALBcJ_T0037693.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270415 87278723 + Edil3 protein_coding processed_transcript MGP_BALBcJ_T0037694.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270469 87493867 + Edil3 protein_coding retained_intron MGP_BALBcJ_T0037695.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270473 87545119 + Edil3 protein_coding retained_intron MGP_BALBcJ_T0037696.1 MGP_BALBcJ_G0020748.1 mouse_genomes_project 13 87270497 87776238 + MGP_BALBcJ_P0037696 Edil3 protein_coding protein_coding MGP_BALBcJ_T0036873.1 MGP_BALBcJ_G0020470.1 mouse_genomes_project 13 44497825 44511495 - Dek protein_coding processed_transcript MGP_BALBcJ_T0036874.1 MGP_BALBcJ_G0020470.1 mouse_genomes_project 13 44497832 44519232 - MGP_BALBcJ_P0036874 Dek protein_coding protein_coding MGP_BALBcJ_T0036875.1 MGP_BALBcJ_G0020470.1 mouse_genomes_project 13 44501647 44519243 - MGP_BALBcJ_P0036875 Dek protein_coding protein_coding MGP_BALBcJ_T0036876.1 MGP_BALBcJ_G0020470.1 mouse_genomes_project 13 44511211 44518872 - MGP_BALBcJ_P0036876 Dek protein_coding protein_coding MGP_BALBcJ_T0036877.1 MGP_BALBcJ_G0020470.1 mouse_genomes_project 13 44514532 44519196 - Dek protein_coding processed_transcript MGP_BALBcJ_T0036878.1 MGP_BALBcJ_G0020470.1 mouse_genomes_project 13 44518427 44519225 - Dek protein_coding processed_transcript MGP_BALBcJ_T0037639.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81951389 82119921 + MGP_BALBcJ_P0037639 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037640.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81951561 82120264 + MGP_BALBcJ_P0037640 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037641.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81951595 82049127 + MGP_BALBcJ_P0037641 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037642.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81951595 82049061 + MGP_BALBcJ_P0037642 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037643.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81951595 82123657 + MGP_BALBcJ_P0037643 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037644.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81951595 82123657 + MGP_BALBcJ_P0037644 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037645.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81971138 82082106 + MGP_BALBcJ_P0037645 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037646.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81972536 82089856 + MGP_BALBcJ_P0037646 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037647.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81973042 81977594 + Mef2c protein_coding retained_intron MGP_BALBcJ_T0037648.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81973099 82121037 + MGP_BALBcJ_P0037648 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037649.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81973100 82082248 + MGP_BALBcJ_P0037649 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037650.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81973106 82120271 + MGP_BALBcJ_P0037650 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037651.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81973136 82109555 + MGP_BALBcJ_P0037651 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037652.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81973165 82090606 + Mef2c protein_coding retained_intron MGP_BALBcJ_T0037653.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 81978382 82082097 + MGP_BALBcJ_P0037653 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037654.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82027840 82092155 + MGP_BALBcJ_P0037654 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037655.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82027873 82082285 + MGP_BALBcJ_P0037655 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037656.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82029099 82123659 + MGP_BALBcJ_P0037656 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037657.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82029110 82033904 + Mef2c protein_coding retained_intron MGP_BALBcJ_T0037658.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82029114 82121051 + MGP_BALBcJ_P0037658 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037659.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82029117 82089957 + MGP_BALBcJ_P0037659 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037660.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82030637 82109508 + MGP_BALBcJ_P0037660 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037661.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82030702 82089882 + MGP_BALBcJ_P0037661 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037662.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82031169 82119209 + MGP_BALBcJ_P0037662 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037663.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82031169 82119209 + MGP_BALBcJ_P0037663 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037664.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82031169 82123659 + MGP_BALBcJ_P0037664 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037665.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82082315 82119314 + MGP_BALBcJ_P0037665 Mef2c protein_coding protein_coding MGP_BALBcJ_T0037666.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82089781 82112162 + MGP_BALBcJ_P0037666 Mef2c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037667.1 MGP_BALBcJ_G0020743.1 mouse_genomes_project 13 82109532 82119317 + MGP_BALBcJ_P0037667 Mef2c protein_coding protein_coding MGP_BALBcJ_T0038153.1 MGP_BALBcJ_G0020895.1 mouse_genomes_project 13 111711329 111714550 + MGP_BALBcJ_P0038153 Cdc20b protein_coding protein_coding MGP_BALBcJ_T0038154.1 MGP_BALBcJ_G0020895.1 mouse_genomes_project 13 111711597 111771827 + MGP_BALBcJ_P0038154 Cdc20b protein_coding protein_coding MGP_BALBcJ_T0038155.1 MGP_BALBcJ_G0020895.1 mouse_genomes_project 13 111711597 111771827 + MGP_BALBcJ_P0038155 Cdc20b protein_coding protein_coding MGP_BALBcJ_T0038156.1 MGP_BALBcJ_G0020895.1 mouse_genomes_project 13 111711597 111771827 + MGP_BALBcJ_P0038156 Cdc20b protein_coding protein_coding MGP_BALBcJ_T0038157.1 MGP_BALBcJ_G0020895.1 mouse_genomes_project 13 111711605 111714550 + MGP_BALBcJ_P0038157 Cdc20b protein_coding protein_coding MGP_BALBcJ_T0009941.1 MGP_BALBcJ_G0008066.1 mouse_genomes_project 13 107986437 107986518 + Mir582 miRNA miRNA MGP_BALBcJ_T0006534.1 MGP_BALBcJ_G0005418.1 mouse_genomes_project 13 36259753 36265434 + 5033403F01Rik lincRNA lincRNA MGP_BALBcJ_T0036111.1 MGP_BALBcJ_G0020132.1 mouse_genomes_project 13 100277 129982 + MGP_BALBcJ_P0036111 Gdi2 protein_coding protein_coding MGP_BALBcJ_T0036838.1 MGP_BALBcJ_G0020456.1 mouse_genomes_project 13 42460649 42463214 + MGP_BALBcJ_P0036838 Gm9817 protein_coding protein_coding MGP_BALBcJ_T0036166.1 MGP_BALBcJ_G0020156.1 mouse_genomes_project 13 4798713 5376742 + MGP_BALBcJ_P0036166 Adarb2 protein_coding protein_coding MGP_BALBcJ_T0036167.1 MGP_BALBcJ_G0020156.1 mouse_genomes_project 13 4798755 4942919 + MGP_BALBcJ_P0036167 Adarb2 protein_coding protein_coding MGP_BALBcJ_T0036168.1 MGP_BALBcJ_G0020156.1 mouse_genomes_project 13 4798760 5378415 + MGP_BALBcJ_P0036168 Adarb2 protein_coding protein_coding MGP_BALBcJ_T0036169.1 MGP_BALBcJ_G0020156.1 mouse_genomes_project 13 5154870 5372614 + MGP_BALBcJ_P0036169 Adarb2 protein_coding protein_coding MGP_BALBcJ_T0037069.1 MGP_BALBcJ_G0020528.1 mouse_genomes_project 13 52401612 52415135 - MGP_BALBcJ_P0037069 Gprin1 protein_coding protein_coding MGP_BALBcJ_T0036365.1 MGP_BALBcJ_G0020225.1 mouse_genomes_project 13 18424532 18442456 - MGP_BALBcJ_P0036365 Zkscan8 protein_coding protein_coding MGP_BALBcJ_T0036366.1 MGP_BALBcJ_G0020225.1 mouse_genomes_project 13 18433141 18442368 - MGP_BALBcJ_P0036366 Zkscan8 protein_coding protein_coding MGP_BALBcJ_T0036367.1 MGP_BALBcJ_G0020225.1 mouse_genomes_project 13 18437759 18442409 - MGP_BALBcJ_P0036367 Zkscan8 protein_coding protein_coding MGP_BALBcJ_T0017300.1 MGP_BALBcJ_G0015181.1 mouse_genomes_project 13 12280370 12302739 - Gm6556 processed_transcript antisense MGP_BALBcJ_T0017301.1 MGP_BALBcJ_G0015181.1 mouse_genomes_project 13 12301885 12303770 - Gm6556 processed_transcript TEC MGP_BALBcJ_T0037074.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449553 52452925 + MGP_BALBcJ_P0037074 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037075.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449556 52452413 + MGP_BALBcJ_P0037075 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037076.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449556 52453019 + MGP_BALBcJ_P0037076 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037077.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449556 52452203 + MGP_BALBcJ_P0037077 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037078.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449556 52452925 + MGP_BALBcJ_P0037078 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037079.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449558 52452926 + MGP_BALBcJ_P0037079 Eif4e1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037080.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449558 52452934 + MGP_BALBcJ_P0037080 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037081.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449558 52453896 + MGP_BALBcJ_P0037081 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037082.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449568 52453888 + MGP_BALBcJ_P0037082 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037083.1 MGP_BALBcJ_G0020530.1 mouse_genomes_project 13 52449575 52453026 + MGP_BALBcJ_P0037083 Eif4e1b protein_coding protein_coding MGP_BALBcJ_T0037452.1 MGP_BALBcJ_G0020664.1 mouse_genomes_project 13 65601239 65631190 - MGP_BALBcJ_P0037452 protein_coding protein_coding MGP_BALBcJ_T0037045.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52280634 52326032 + MGP_BALBcJ_P0037045 Faf2 protein_coding protein_coding MGP_BALBcJ_T0037046.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52280654 52302646 + MGP_BALBcJ_P0037046 Faf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037047.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52280674 52323550 + MGP_BALBcJ_P0037047 Faf2 protein_coding protein_coding MGP_BALBcJ_T0037048.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52280685 52309534 + MGP_BALBcJ_P0037048 Faf2 protein_coding protein_coding MGP_BALBcJ_T0037049.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52280685 52309423 + MGP_BALBcJ_P0037049 Faf2 protein_coding protein_coding MGP_BALBcJ_T0037050.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52280688 52317465 + MGP_BALBcJ_P0037050 Faf2 protein_coding protein_coding MGP_BALBcJ_T0037051.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52302648 52316627 + MGP_BALBcJ_P0037051 Faf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037052.1 MGP_BALBcJ_G0020525.1 mouse_genomes_project 13 52312546 52316652 + Faf2 protein_coding retained_intron MGP_BALBcJ_T0036282.1 MGP_BALBcJ_G0020188.1 mouse_genomes_project 13 11477258 11479997 - MGP_BALBcJ_P0036282 Mrpl32 protein_coding protein_coding MGP_BALBcJ_T0003452.1 MGP_BALBcJ_G0003160.1 mouse_genomes_project 13 67850817 67851779 - A530095I07Rik antisense antisense MGP_BALBcJ_T0036113.1 MGP_BALBcJ_G0020134.1 mouse_genomes_project 13 211023 235152 + MGP_BALBcJ_P0036113 Asb13 protein_coding protein_coding MGP_BALBcJ_T0036114.1 MGP_BALBcJ_G0020134.1 mouse_genomes_project 13 211080 211774 + Asb13 protein_coding processed_transcript MGP_BALBcJ_T0036115.1 MGP_BALBcJ_G0020134.1 mouse_genomes_project 13 211089 233873 + Asb13 protein_coding processed_transcript MGP_BALBcJ_T0036116.1 MGP_BALBcJ_G0020134.1 mouse_genomes_project 13 211090 225651 + Asb13 protein_coding retained_intron MGP_BALBcJ_T0000875.1 MGP_BALBcJ_G0000806.1 mouse_genomes_project 13 49633980 49636134 - TEC TEC MGP_BALBcJ_T0037966.1 MGP_BALBcJ_G0020844.1 mouse_genomes_project 13 99406715 99419763 - MGP_BALBcJ_P0037966 Mrps36 protein_coding protein_coding MGP_BALBcJ_T0037967.1 MGP_BALBcJ_G0020844.1 mouse_genomes_project 13 99406837 99419761 - MGP_BALBcJ_P0037967 Mrps36 protein_coding protein_coding MGP_BALBcJ_T0037968.1 MGP_BALBcJ_G0020844.1 mouse_genomes_project 13 99406889 99419235 - Mrps36 protein_coding processed_transcript MGP_BALBcJ_T0037969.1 MGP_BALBcJ_G0020844.1 mouse_genomes_project 13 99406912 99419692 - Mrps36 protein_coding processed_transcript MGP_BALBcJ_T0037970.1 MGP_BALBcJ_G0020844.1 mouse_genomes_project 13 99406940 99419218 - Mrps36 protein_coding processed_transcript MGP_BALBcJ_T0037971.1 MGP_BALBcJ_G0020844.1 mouse_genomes_project 13 99418511 99419217 - Mrps36 protein_coding processed_transcript MGP_BALBcJ_T0098834.1 MGP_BALBcJ_G0036884.1 mouse_genomes_project 13 26471533 26472377 - Gm11364 sense_intronic sense_intronic MGP_BALBcJ_T0002480.1 MGP_BALBcJ_G0002389.1 mouse_genomes_project 13 16172493 16180522 + MGP_BALBcJ_P0002480 Tcrg-C2 TR_C_gene TR_C_gene MGP_BALBcJ_T0038092.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107126547 107520792 + Pde4d protein_coding processed_transcript MGP_BALBcJ_T0038093.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107126608 107519807 + Pde4d protein_coding processed_transcript MGP_BALBcJ_T0038094.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107316961 108605289 + MGP_BALBcJ_P0038094 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038095.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107519829 108605159 + MGP_BALBcJ_P0038095 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038096.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107777031 107996727 + Pde4d protein_coding processed_transcript MGP_BALBcJ_T0038097.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107777159 108432203 + Pde4d protein_coding retained_intron MGP_BALBcJ_T0038098.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107777441 108605202 + MGP_BALBcJ_P0038098 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038099.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 107922369 108605179 + MGP_BALBcJ_P0038099 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038100.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108090978 108605179 + MGP_BALBcJ_P0038100 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038101.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108233337 108605159 + MGP_BALBcJ_P0038101 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038102.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108284809 108605179 + MGP_BALBcJ_P0038102 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038103.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108350731 108605289 + MGP_BALBcJ_P0038103 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038104.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108350751 108432200 + Pde4d protein_coding retained_intron MGP_BALBcJ_T0038105.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108422312 108426704 + Pde4d protein_coding processed_transcript MGP_BALBcJ_T0038106.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108555249 108605202 + MGP_BALBcJ_P0038106 Pde4d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038107.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108555253 108607285 + MGP_BALBcJ_P0038107 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038108.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108575064 108590433 + Pde4d protein_coding retained_intron MGP_BALBcJ_T0038109.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108577216 108605159 + MGP_BALBcJ_P0038109 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038110.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108578997 108605179 + MGP_BALBcJ_P0038110 Pde4d protein_coding protein_coding MGP_BALBcJ_T0038111.1 MGP_BALBcJ_G0020877.1 mouse_genomes_project 13 108587421 108602163 + MGP_BALBcJ_P0038111 Pde4d protein_coding protein_coding MGP_BALBcJ_T0006580.1 MGP_BALBcJ_G0005449.1 mouse_genomes_project 13 78366171 78550733 - lincRNA lincRNA MGP_BALBcJ_T0037542.1 MGP_BALBcJ_G0020708.1 mouse_genomes_project 13 72282766 72314389 + MGP_BALBcJ_P0037542 Zdhhc11 protein_coding protein_coding MGP_BALBcJ_T0006567.1 MGP_BALBcJ_G0005439.1 mouse_genomes_project 13 55879832 55880744 + 1700066J03Rik lincRNA lincRNA MGP_BALBcJ_T0006540.1 MGP_BALBcJ_G0005423.1 mouse_genomes_project 13 41822223 41840433 + 1700029N11Rik lincRNA lincRNA MGP_BALBcJ_T0006541.1 MGP_BALBcJ_G0005423.1 mouse_genomes_project 13 41822238 41840436 + 1700029N11Rik lincRNA lincRNA MGP_BALBcJ_T0037722.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89947185 90180021 + Ssbp2 protein_coding processed_transcript MGP_BALBcJ_T0037723.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89947952 90194835 + MGP_BALBcJ_P0037723 Ssbp2 protein_coding protein_coding MGP_BALBcJ_T0037724.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89947993 90192642 + MGP_BALBcJ_P0037724 Ssbp2 protein_coding protein_coding MGP_BALBcJ_T0037725.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89948029 90032577 + MGP_BALBcJ_P0037725 Ssbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037726.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89948062 90165347 + Ssbp2 protein_coding retained_intron MGP_BALBcJ_T0037727.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89948065 90055427 + Ssbp2 protein_coding retained_intron MGP_BALBcJ_T0037728.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 89948083 90019594 + Ssbp2 protein_coding retained_intron MGP_BALBcJ_T0037729.1 MGP_BALBcJ_G0020757.1 mouse_genomes_project 13 90163373 90182844 + Ssbp2 protein_coding retained_intron MGP_BALBcJ_T0009918.1 MGP_BALBcJ_G0008043.1 mouse_genomes_project 13 56045678 56045784 - Mir6369 miRNA miRNA MGP_BALBcJ_T0036930.1 MGP_BALBcJ_G0020491.1 mouse_genomes_project 13 47124615 47151726 + MGP_BALBcJ_P0036930 Nol8 protein_coding protein_coding MGP_BALBcJ_T0009889.1 MGP_BALBcJ_G0008014.1 mouse_genomes_project 13 5528953 5529056 - Gm22750 miRNA miRNA MGP_BALBcJ_T0038186.1 MGP_BALBcJ_G0020911.1 mouse_genomes_project 13 115020798 115032088 - MGP_BALBcJ_P0038186 Isl1 protein_coding protein_coding MGP_BALBcJ_T0038187.1 MGP_BALBcJ_G0020911.1 mouse_genomes_project 13 115021781 115031821 - MGP_BALBcJ_P0038187 Isl1 protein_coding protein_coding MGP_BALBcJ_T0038188.1 MGP_BALBcJ_G0020911.1 mouse_genomes_project 13 115021913 115025865 - Isl1 protein_coding retained_intron MGP_BALBcJ_T0038189.1 MGP_BALBcJ_G0020911.1 mouse_genomes_project 13 115025559 115028816 - Isl1 protein_coding processed_transcript MGP_BALBcJ_T0038190.1 MGP_BALBcJ_G0020911.1 mouse_genomes_project 13 115029313 115032084 - Isl1 protein_coding retained_intron MGP_BALBcJ_T0037472.1 MGP_BALBcJ_G0020675.1 mouse_genomes_project 13 66041030 66056400 - MGP_BALBcJ_P0037472 protein_coding protein_coding MGP_BALBcJ_T0100654.1 MGP_BALBcJ_G0038690.1 mouse_genomes_project 13 74314959 74315089 + Gm24163 snoRNA snoRNA MGP_BALBcJ_T0003470.1 MGP_BALBcJ_G0003168.1 mouse_genomes_project 13 90892214 90904383 - C030017D09Rik antisense antisense MGP_BALBcJ_T0036296.1 MGP_BALBcJ_G0020196.1 mouse_genomes_project 13 14734956 14786513 - MGP_BALBcJ_P0036296 Rala protein_coding protein_coding MGP_BALBcJ_T0038152.1 MGP_BALBcJ_G0020894.1 mouse_genomes_project 13 111668458 111674988 + MGP_BALBcJ_P0038152 Mcidas protein_coding protein_coding MGP_BALBcJ_T0036621.1 MGP_BALBcJ_G0020372.1 mouse_genomes_project 13 28856374 28861970 + MGP_BALBcJ_P0036621 Foxf2 protein_coding protein_coding MGP_BALBcJ_T0038218.1 MGP_BALBcJ_G0020926.1 mouse_genomes_project 13 118324617 118342206 + MGP_BALBcJ_P0038218 Hmgcs1 protein_coding protein_coding MGP_BALBcJ_T0037443.1 MGP_BALBcJ_G0020657.1 mouse_genomes_project 13 65468257 65486860 - MGP_BALBcJ_P0037443 Zfp595 protein_coding protein_coding MGP_BALBcJ_T0037197.1 MGP_BALBcJ_G0020565.1 mouse_genomes_project 13 53950181 53951809 - MGP_BALBcJ_P0037197 Neurog1 protein_coding protein_coding MGP_BALBcJ_T0037329.1 MGP_BALBcJ_G0020611.1 mouse_genomes_project 13 59007010 59015612 - MGP_BALBcJ_P0037329 Cts8 protein_coding protein_coding MGP_BALBcJ_T0037479.1 MGP_BALBcJ_G0020680.1 mouse_genomes_project 13 66894036 66917265 - MGP_BALBcJ_P0037479 Mtrr protein_coding protein_coding MGP_BALBcJ_T0037939.1 MGP_BALBcJ_G0020834.1 mouse_genomes_project 13 98764495 98834292 - MGP_BALBcJ_P0037939 Naip2 protein_coding protein_coding MGP_BALBcJ_T0037940.1 MGP_BALBcJ_G0020834.1 mouse_genomes_project 13 98764495 98829353 - MGP_BALBcJ_P0037940 Naip2 protein_coding protein_coding MGP_BALBcJ_T0037941.1 MGP_BALBcJ_G0020834.1 mouse_genomes_project 13 98764663 98834163 - MGP_BALBcJ_P0037941 Naip2 protein_coding protein_coding MGP_BALBcJ_T0011337.1 MGP_BALBcJ_G0009462.1 mouse_genomes_project 13 90233858 90234158 - Gm24597 misc_RNA misc_RNA MGP_BALBcJ_T0036720.1 MGP_BALBcJ_G0020410.1 mouse_genomes_project 13 33194166 33206753 + Ppp1r3g protein_coding processed_transcript MGP_BALBcJ_T0036721.1 MGP_BALBcJ_G0020410.1 mouse_genomes_project 13 33206281 33208817 + MGP_BALBcJ_P0036721 Ppp1r3g protein_coding protein_coding MGP_BALBcJ_T0037025.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52206008 52221488 - 4833439L19Rik protein_coding processed_transcript MGP_BALBcJ_T0037026.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52206224 52221517 - MGP_BALBcJ_P0037026 4833439L19Rik protein_coding protein_coding MGP_BALBcJ_T0037027.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52212331 52221446 - 4833439L19Rik protein_coding retained_intron MGP_BALBcJ_T0037028.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52212505 52221493 - 4833439L19Rik protein_coding retained_intron MGP_BALBcJ_T0037029.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52212724 52221485 - MGP_BALBcJ_P0037029 4833439L19Rik protein_coding protein_coding MGP_BALBcJ_T0037030.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52217708 52221499 - 4833439L19Rik protein_coding retained_intron MGP_BALBcJ_T0037031.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52217830 52221511 - MGP_BALBcJ_P0037031 4833439L19Rik protein_coding protein_coding MGP_BALBcJ_T0037032.1 MGP_BALBcJ_G0020520.1 mouse_genomes_project 13 52217845 52221480 - MGP_BALBcJ_P0037032 4833439L19Rik protein_coding protein_coding MGP_BALBcJ_T0098492.1 MGP_BALBcJ_G0036546.1 mouse_genomes_project 13 231861 231975 + Gm23084 rRNA rRNA MGP_BALBcJ_T0037230.1 MGP_BALBcJ_G0020577.1 mouse_genomes_project 13 55858170 55860840 - MGP_BALBcJ_P0037230 Hnrnpa0 protein_coding protein_coding MGP_BALBcJ_T0100645.1 MGP_BALBcJ_G0038681.1 mouse_genomes_project 13 47180866 47180988 + Gm23482 snoRNA snoRNA MGP_BALBcJ_T0038052.1 MGP_BALBcJ_G0020866.1 mouse_genomes_project 13 104121073 104125515 + MGP_BALBcJ_P0038052 Htr1a protein_coding protein_coding MGP_BALBcJ_T0036941.1 MGP_BALBcJ_G0020494.1 mouse_genomes_project 13 47418157 47418397 - MGP_BALBcJ_P0036941 protein_coding protein_coding MGP_BALBcJ_T0037182.1 MGP_BALBcJ_G0020560.1 mouse_genomes_project 13 53419555 53470973 + MGP_BALBcJ_P0037182 Pcbd2 protein_coding protein_coding MGP_BALBcJ_T0037183.1 MGP_BALBcJ_G0020560.1 mouse_genomes_project 13 53419555 53470971 + MGP_BALBcJ_P0037183 Pcbd2 protein_coding protein_coding MGP_BALBcJ_T0037549.1 MGP_BALBcJ_G0020712.1 mouse_genomes_project 13 72442713 72488352 + MGP_BALBcJ_P0037549 Slc9a3 protein_coding unknown_likely_coding MGP_BALBcJ_T0037550.1 MGP_BALBcJ_G0020712.1 mouse_genomes_project 13 72442713 72487253 + MGP_BALBcJ_P0037550 Slc9a3 protein_coding protein_coding MGP_BALBcJ_T0003490.1 MGP_BALBcJ_G0003181.1 mouse_genomes_project 13 117461288 117485229 - Gm16263 antisense antisense MGP_BALBcJ_T0038213.1 MGP_BALBcJ_G0020921.1 mouse_genomes_project 13 118195249 118220598 + MGP_BALBcJ_P0038213 4833420G17Rik protein_coding protein_coding MGP_BALBcJ_T0011323.1 MGP_BALBcJ_G0009448.1 mouse_genomes_project 13 9310622 9310920 + Gm23081 misc_RNA misc_RNA MGP_BALBcJ_T0037368.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61918484 61954560 + MGP_BALBcJ_P0037368 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0037369.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61918546 61974063 + MGP_BALBcJ_P0037369 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0037370.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61918578 61938205 + Ercc6l2 protein_coding processed_transcript MGP_BALBcJ_T0037371.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61918578 61954525 + MGP_BALBcJ_P0037371 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0037372.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61918578 61971097 + MGP_BALBcJ_P0037372 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0037373.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61922835 61970741 + MGP_BALBcJ_P0037373 Ercc6l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037374.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61922837 61971118 + MGP_BALBcJ_P0037374 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0037375.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61922837 61959048 + MGP_BALBcJ_P0037375 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0037376.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61923160 61942877 + MGP_BALBcJ_P0037376 Ercc6l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0037377.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61971972 61973970 + Ercc6l2 protein_coding processed_transcript MGP_BALBcJ_T0037378.1 MGP_BALBcJ_G0020623.1 mouse_genomes_project 13 61973927 62001893 + MGP_BALBcJ_P0037378 Ercc6l2 protein_coding protein_coding MGP_BALBcJ_T0038161.1 MGP_BALBcJ_G0020899.1 mouse_genomes_project 13 111852950 111907616 - MGP_BALBcJ_P0038161 Gzmk protein_coding protein_coding MGP_BALBcJ_T0038162.1 MGP_BALBcJ_G0020899.1 mouse_genomes_project 13 111852980 111862366 - MGP_BALBcJ_P0038162 Gzmk protein_coding protein_coding MGP_BALBcJ_T0038163.1 MGP_BALBcJ_G0020899.1 mouse_genomes_project 13 111853134 111862390 - MGP_BALBcJ_P0038163 Gzmk protein_coding nonsense_mediated_decay MGP_BALBcJ_T0036190.1 MGP_BALBcJ_G0020159.1 mouse_genomes_project 13 5557215 5563872 - MGP_BALBcJ_P0036190 protein_coding protein_coding MGP_BALBcJ_T0036191.1 MGP_BALBcJ_G0020159.1 mouse_genomes_project 13 5557345 5559941 - MGP_BALBcJ_P0036191 protein_coding protein_coding MGP_BALBcJ_T0006489.1 MGP_BALBcJ_G0005386.1 mouse_genomes_project 13 2446953 2449536 - 1700016G22Rik lincRNA lincRNA MGP_BALBcJ_T0006490.1 MGP_BALBcJ_G0005386.1 mouse_genomes_project 13 2446953 2449156 - 1700016G22Rik lincRNA lincRNA MGP_BALBcJ_T0036957.1 MGP_BALBcJ_G0020498.1 mouse_genomes_project 13 48780101 48784272 + MGP_BALBcJ_P0036957 Nxnl2 protein_coding protein_coding MGP_BALBcJ_T0098324.1 MGP_BALBcJ_G0036378.1 mouse_genomes_project 13 108352809 108353206 + pseudogene pseudogene MGP_BALBcJ_T0037387.1 MGP_BALBcJ_G0020628.1 mouse_genomes_project 13 62301835 62385097 - MGP_BALBcJ_P0037387 Cdc14b protein_coding protein_coding MGP_BALBcJ_T0037388.1 MGP_BALBcJ_G0020628.1 mouse_genomes_project 13 62301835 62359029 - MGP_BALBcJ_P0037388 Cdc14b protein_coding protein_coding MGP_BALBcJ_T0037389.1 MGP_BALBcJ_G0020628.1 mouse_genomes_project 13 62304632 62385003 - MGP_BALBcJ_P0037389 Cdc14b protein_coding protein_coding MGP_BALBcJ_T0037390.1 MGP_BALBcJ_G0020628.1 mouse_genomes_project 13 62305910 62358960 - MGP_BALBcJ_P0037390 Cdc14b protein_coding unknown_likely_coding MGP_BALBcJ_T0012908.1 MGP_BALBcJ_G0011005.1 mouse_genomes_project 13 62048200 62048844 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0036227.1 MGP_BALBcJ_G0020166.1 mouse_genomes_project 13 8111990 8667868 - MGP_BALBcJ_P0036227 Ryr2 protein_coding protein_coding MGP_BALBcJ_T0036228.1 MGP_BALBcJ_G0020166.1 mouse_genomes_project 13 8111990 8667868 - MGP_BALBcJ_P0036228 Ryr2 protein_coding protein_coding MGP_BALBcJ_T0036229.1 MGP_BALBcJ_G0020166.1 mouse_genomes_project 13 8113835 8667369 - MGP_BALBcJ_P0036229 Ryr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0037398.1 MGP_BALBcJ_G0020636.1 mouse_genomes_project 13 63119091 63127203 - MGP_BALBcJ_P0037398 Prss47 protein_coding protein_coding MGP_BALBcJ_T0037399.1 MGP_BALBcJ_G0020636.1 mouse_genomes_project 13 63119402 63126290 - MGP_BALBcJ_P0037399 Prss47 protein_coding protein_coding MGP_BALBcJ_T0036555.1 MGP_BALBcJ_G0020336.1 mouse_genomes_project 13 23817457 23819408 - MGP_BALBcJ_P0036555 Hdgfl1 protein_coding protein_coding MGP_BALBcJ_T0036119.1 MGP_BALBcJ_G0020137.1 mouse_genomes_project 13 429893 439876 + MGP_BALBcJ_P0036119 protein_coding protein_coding MGP_BALBcJ_T0036120.1 MGP_BALBcJ_G0020137.1 mouse_genomes_project 13 439233 440107 + MGP_BALBcJ_P0036120 protein_coding protein_coding MGP_BALBcJ_T0037304.1 MGP_BALBcJ_G0020593.1 mouse_genomes_project 13 57483190 57489018 - MGP_BALBcJ_P0037304 Spata31d1d protein_coding protein_coding MGP_BALBcJ_T0036920.1 MGP_BALBcJ_G0020484.1 mouse_genomes_project 13 46811960 46857168 + MGP_BALBcJ_P0036920 Bicd2 protein_coding protein_coding MGP_BALBcJ_T0036921.1 MGP_BALBcJ_G0020484.1 mouse_genomes_project 13 46811960 46857168 + MGP_BALBcJ_P0036921 Bicd2 protein_coding protein_coding MGP_BALBcJ_T0036922.1 MGP_BALBcJ_G0020484.1 mouse_genomes_project 13 46811960 46857168 + MGP_BALBcJ_P0036922 Bicd2 protein_coding protein_coding MGP_BALBcJ_T0036390.1 MGP_BALBcJ_G0020244.1 mouse_genomes_project 13 18700667 18752822 + MGP_BALBcJ_P0036390 Hist1h2bq protein_coding protein_coding MGP_BALBcJ_T0036391.1 MGP_BALBcJ_G0020244.1 mouse_genomes_project 13 18700667 18753022 + MGP_BALBcJ_P0036391 Hist1h2bq protein_coding protein_coding MGP_BALBcJ_T0036810.1 MGP_BALBcJ_G0020446.1 mouse_genomes_project 13 40535557 40558391 - MGP_BALBcJ_P0036810 Tbc1d7 protein_coding protein_coding MGP_BALBcJ_T0036811.1 MGP_BALBcJ_G0020446.1 mouse_genomes_project 13 40535557 40558391 - MGP_BALBcJ_P0036811 Tbc1d7 protein_coding protein_coding MGP_BALBcJ_T0036150.1 MGP_BALBcJ_G0020153.1 mouse_genomes_project 13 3143097 3174336 + MGP_BALBcJ_P0036150 Pitrm1 protein_coding protein_coding MGP_BALBcJ_T0036151.1 MGP_BALBcJ_G0020153.1 mouse_genomes_project 13 3143114 3173940 + MGP_BALBcJ_P0036151 Pitrm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0036917.1 MGP_BALBcJ_G0020483.1 mouse_genomes_project 13 46730137 46777663 - MGP_BALBcJ_P0036917 Fgd3 protein_coding protein_coding MGP_BALBcJ_T0036918.1 MGP_BALBcJ_G0020483.1 mouse_genomes_project 13 46731693 46767462 - MGP_BALBcJ_P0036918 Fgd3 protein_coding protein_coding MGP_BALBcJ_T0036919.1 MGP_BALBcJ_G0020483.1 mouse_genomes_project 13 46741830 46788662 - MGP_BALBcJ_P0036919 Fgd3 protein_coding protein_coding MGP_BALBcJ_T0037007.1 MGP_BALBcJ_G0020512.1 mouse_genomes_project 13 51117562 51123718 - MGP_BALBcJ_P0037007 Msx2 protein_coding protein_coding MGP_BALBcJ_T0037008.1 MGP_BALBcJ_G0020512.1 mouse_genomes_project 13 51122149 51123718 - Msx2 protein_coding retained_intron MGP_BALBcJ_T0036256.1 MGP_BALBcJ_G0020183.1 mouse_genomes_project 13 10839857 10841231 - MGP_BALBcJ_P0036256 Gm18856 protein_coding protein_coding MGP_BALBcJ_T0036586.1 MGP_BALBcJ_G0020355.1 mouse_genomes_project 13 24903926 24912028 - MGP_BALBcJ_P0036586 Prl7c1 protein_coding protein_coding MGP_BALBcJ_T0012926.1 MGP_BALBcJ_G0011023.1 mouse_genomes_project 13 86181233 86182239 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000874.1 MGP_BALBcJ_G0000805.1 mouse_genomes_project 13 45998480 46000870 - TEC TEC MGP_BALBcJ_T0036231.1 MGP_BALBcJ_G0020168.1 mouse_genomes_project 13 8840500 8912534 - MGP_BALBcJ_P0036231 Actn2 protein_coding protein_coding MGP_BALBcJ_T0036232.1 MGP_BALBcJ_G0020168.1 mouse_genomes_project 13 8840509 8912498 - MGP_BALBcJ_P0036232 Actn2 protein_coding protein_coding MGP_BALBcJ_T0036233.1 MGP_BALBcJ_G0020168.1 mouse_genomes_project 13 8879515 8912506 - MGP_BALBcJ_P0036233 Actn2 protein_coding protein_coding MGP_BALBcJ_T0036375.1 MGP_BALBcJ_G0020231.1 mouse_genomes_project 13 18545825 18549500 - MGP_BALBcJ_P0036375 Olfr11 protein_coding protein_coding MGP_BALBcJ_T0036376.1 MGP_BALBcJ_G0020231.1 mouse_genomes_project 13 18545825 18546767 - MGP_BALBcJ_P0036376 Olfr11 protein_coding protein_coding MGP_BALBcJ_T0009946.1 MGP_BALBcJ_G0008071.1 mouse_genomes_project 13 113269090 113269190 + Gm25950 miRNA miRNA MGP_BALBcJ_T0006497.1 MGP_BALBcJ_G0005392.1 mouse_genomes_project 13 21386620 21387694 - Gm11342 lincRNA lincRNA MGP_BALBcJ_T0038041.1 MGP_BALBcJ_G0020861.1 mouse_genomes_project 13 103454821 103503034 + Srek1ip1 protein_coding processed_transcript MGP_BALBcJ_T0038043.1 MGP_BALBcJ_G0020861.1 mouse_genomes_project 13 103479444 103503948 + MGP_BALBcJ_P0038043 Srek1ip1 protein_coding protein_coding MGP_BALBcJ_T0038044.1 MGP_BALBcJ_G0020861.1 mouse_genomes_project 13 103479506 103503343 + MGP_BALBcJ_P0038044 Srek1ip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0038045.1 MGP_BALBcJ_G0020861.1 mouse_genomes_project 13 103488926 103498931 + Srek1ip1 protein_coding retained_intron MGP_BALBcJ_T0038046.1 MGP_BALBcJ_G0020861.1 mouse_genomes_project 13 103498707 103503945 + Srek1ip1 protein_coding retained_intron MGP_BALBcJ_T0009893.1 MGP_BALBcJ_G0008018.1 mouse_genomes_project 13 18340754 18340835 + Mir1896 miRNA miRNA MGP_BALBcJ_T0037456.1 MGP_BALBcJ_G0020667.1 mouse_genomes_project 13 65677659 65712718 - MGP_BALBcJ_P0037456 Gm26965 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100625.1 MGP_BALBcJ_G0038661.1 mouse_genomes_project 13 1764908 1765040 - Gm24790 snoRNA snoRNA MGP_BALBcJ_T0102196.1 MGP_BALBcJ_G0040012.1 mouse_genomes_project 13 19658255 19659254 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006545.1 MGP_BALBcJ_G0005426.1 mouse_genomes_project 13 45493640 45715487 - A330033J07Rik lincRNA lincRNA MGP_BALBcJ_T0006546.1 MGP_BALBcJ_G0005426.1 mouse_genomes_project 13 45691923 45714945 - A330033J07Rik lincRNA lincRNA MGP_BALBcJ_T0036923.1 MGP_BALBcJ_G0020485.1 mouse_genomes_project 13 46893892 46936632 + MGP_BALBcJ_P0036923 Ippk protein_coding protein_coding MGP_BALBcJ_T0036384.1 MGP_BALBcJ_G0020238.1 mouse_genomes_project 13 18660058 18667321 - MGP_BALBcJ_P0036384 Hist1h4k protein_coding protein_coding MGP_BALBcJ_T0006593.1 MGP_BALBcJ_G0005456.1 mouse_genomes_project 13 82489436 82526455 - Gm17750 lincRNA lincRNA MGP_BALBcJ_T0036849.1 MGP_BALBcJ_G0020463.1 mouse_genomes_project 13 43934439 44055418 + MGP_BALBcJ_P0036849 Cap2 protein_coding protein_coding MGP_BALBcJ_T0036850.1 MGP_BALBcJ_G0020463.1 mouse_genomes_project 13 44043185 44053626 + Cap2 protein_coding processed_transcript MGP_BALBcJ_T0100648.1 MGP_BALBcJ_G0038684.1 mouse_genomes_project 13 54636380 54636509 - Gm22777 snoRNA snoRNA MGP_BALBcJ_T0037871.1 MGP_BALBcJ_G0020808.1 mouse_genomes_project 13 95675880 95684221 - MGP_BALBcJ_P0037871 Nsa2 protein_coding protein_coding MGP_BALBcJ_T0036566.1 MGP_BALBcJ_G0020344.1 mouse_genomes_project 13 24398908 24405534 + MGP_BALBcJ_P0036566 Prl6a1 protein_coding protein_coding MGP_BALBcJ_T0036567.1 MGP_BALBcJ_G0020344.1 mouse_genomes_project 13 24400227 24405534 + MGP_BALBcJ_P0036567 Prl6a1 protein_coding protein_coding MGP_BALBcJ_T0102205.1 MGP_BALBcJ_G0040021.1 mouse_genomes_project 13 19938297 19938534 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0036235.1 MGP_BALBcJ_G0020170.1 mouse_genomes_project 13 9011463 9030395 - MGP_BALBcJ_P0036235 Lgals8 protein_coding protein_coding MGP_BALBcJ_T0036236.1 MGP_BALBcJ_G0020170.1 mouse_genomes_project 13 9011468 9020166 - Lgals8 protein_coding retained_intron MGP_BALBcJ_T0036237.1 MGP_BALBcJ_G0020170.1 mouse_genomes_project 13 9012896 9032675 - MGP_BALBcJ_P0036237 Lgals8 protein_coding protein_coding MGP_BALBcJ_T0036238.1 MGP_BALBcJ_G0020170.1 mouse_genomes_project 13 9022602 9027709 - Lgals8 protein_coding retained_intron MGP_BALBcJ_T0036239.1 MGP_BALBcJ_G0020170.1 mouse_genomes_project 13 9023923 9026200 - Lgals8 protein_coding retained_intron MGP_BALBcJ_T0036240.1 MGP_BALBcJ_G0020170.1 mouse_genomes_project 13 9030450 9032227 - Lgals8 protein_coding processed_transcript MGP_BALBcJ_T0038150.1 MGP_BALBcJ_G0020892.1 mouse_genomes_project 13 111600642 111642601 + MGP_BALBcJ_P0038150 Dhx29 protein_coding protein_coding MGP_BALBcJ_T0038194.1 MGP_BALBcJ_G0020915.1 mouse_genomes_project 13 116341320 116736830 + MGP_BALBcJ_P0038194 Hcn1 protein_coding protein_coding MGP_BALBcJ_T0036457.1 MGP_BALBcJ_G0020293.1 mouse_genomes_project 13 20580459 20580850 - MGP_BALBcJ_P0036457 Hist1h4f protein_coding protein_coding MGP_BALBcJ_T0009888.1 MGP_BALBcJ_G0008013.1 mouse_genomes_project 13 3704623 3704733 - Gm22689 miRNA miRNA MGP_BALBcJ_T0003432.1 MGP_BALBcJ_G0003149.1 mouse_genomes_project 13 46335620 46339988 + Phf2os1 antisense antisense MGP_BALBcJ_T0099358.1 MGP_BALBcJ_G0037394.1 mouse_genomes_project 13 12864816 12864923 - Gm22628 snRNA snRNA MGP_BALBcJ_T0037168.1 MGP_BALBcJ_G0020553.1 mouse_genomes_project 13 53226339 53258148 - MGP_BALBcJ_P0037168 Fam193b protein_coding protein_coding MGP_BALBcJ_T0006614.1 MGP_BALBcJ_G0005473.1 mouse_genomes_project 13 100294518 100295134 - Gm29341 lincRNA lincRNA MGP_BALBcJ_T0036430.1 MGP_BALBcJ_G0020272.1 mouse_genomes_project 13 19832149 19833139 - MGP_BALBcJ_P0036430 Vmn1r211 protein_coding protein_coding MGP_BALBcJ_T0036752.1 MGP_BALBcJ_G0020423.1 mouse_genomes_project 13 35777052 35805060 - MGP_BALBcJ_P0036752 Txndc5 protein_coding protein_coding MGP_BALBcJ_T0036753.1 MGP_BALBcJ_G0020423.1 mouse_genomes_project 13 35777134 35804566 - MGP_BALBcJ_P0036753 Txndc5 protein_coding protein_coding MGP_BALBcJ_T0036754.1 MGP_BALBcJ_G0020423.1 mouse_genomes_project 13 35777138 35782806 - Txndc5 protein_coding retained_intron MGP_BALBcJ_T0006615.1 MGP_BALBcJ_G0005474.1 mouse_genomes_project 13 106347800 106352577 + 1700006H21Rik lincRNA lincRNA MGP_BALBcJ_T0006616.1 MGP_BALBcJ_G0005474.1 mouse_genomes_project 13 106347800 106352588 + 1700006H21Rik lincRNA lincRNA MGP_BALBcJ_T0036740.1 MGP_BALBcJ_G0020417.1 mouse_genomes_project 13 35239592 35263657 - MGP_BALBcJ_P0036740 Ssr1 protein_coding protein_coding MGP_BALBcJ_T0100652.1 MGP_BALBcJ_G0038688.1 mouse_genomes_project 13 74111385 74111468 + Gm23012 snoRNA snoRNA MGP_BALBcJ_T0012864.1 MGP_BALBcJ_G0010961.1 mouse_genomes_project 13 19635907 19637217 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0037396.1 MGP_BALBcJ_G0020634.1 mouse_genomes_project 13 63009971 63015811 + MGP_BALBcJ_P0037396 Spata31 protein_coding protein_coding MGP_BALBcJ_T0036590.1 MGP_BALBcJ_G0020358.1 mouse_genomes_project 13 25347956 25361134 + MGP_BALBcJ_P0036590 Prl5a1 protein_coding protein_coding MGP_BALBcJ_T0100643.1 MGP_BALBcJ_G0038679.1 mouse_genomes_project 13 46028595 46028727 - Gm25232 snoRNA snoRNA MGP_BALBcJ_T0009885.1 MGP_BALBcJ_G0008010.1 mouse_genomes_project 13 555943 556067 - Gm22460 miRNA miRNA MGP_BALBcJ_T0036495.1 MGP_BALBcJ_G0020321.1 mouse_genomes_project 13 20985790 20986180 + MGP_BALBcJ_P0036495 Hist1h2aa protein_coding protein_coding MGP_BALBcJ_T0036427.1 MGP_BALBcJ_G0020269.1 mouse_genomes_project 13 19540163 19541114 - MGP_BALBcJ_P0036427 Vmn1r205 protein_coding protein_coding MGP_BALBcJ_T0100655.1 MGP_BALBcJ_G0038691.1 mouse_genomes_project 13 74375373 74375504 - Gm23319 snoRNA snoRNA MGP_BALBcJ_T0100626.1 MGP_BALBcJ_G0038662.1 mouse_genomes_project 13 5560687 5560820 + snoRNA snoRNA MGP_BALBcJ_T0009942.1 MGP_BALBcJ_G0008067.1 mouse_genomes_project 13 108555956 108556036 + Mir1904 miRNA miRNA MGP_BALBcJ_T0036477.1 MGP_BALBcJ_G0020309.1 mouse_genomes_project 13 20793113 20793586 + MGP_BALBcJ_P0036477 Hist1h2ab protein_coding protein_coding MGP_BALBcJ_T0099392.1 MGP_BALBcJ_G0037428.1 mouse_genomes_project 13 113811081 113811188 + Gm25985 snRNA snRNA MGP_BALBcJ_T0037536.1 MGP_BALBcJ_G0020705.1 mouse_genomes_project 13 72133095 72164387 - MGP_BALBcJ_P0037536 Nkd2 protein_coding protein_coding MGP_BALBcJ_T0037537.1 MGP_BALBcJ_G0020705.1 mouse_genomes_project 13 72134255 72164368 - MGP_BALBcJ_P0037537 Nkd2 protein_coding protein_coding MGP_BALBcJ_T0037538.1 MGP_BALBcJ_G0020705.1 mouse_genomes_project 13 72138098 72164368 - Nkd2 protein_coding retained_intron MGP_BALBcJ_T0099383.1 MGP_BALBcJ_G0037419.1 mouse_genomes_project 13 78579431 78579559 + Gm24635 snRNA snRNA MGP_BALBcJ_T0102202.1 MGP_BALBcJ_G0040018.1 mouse_genomes_project 13 19884809 19885244 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0037141.1 MGP_BALBcJ_G0020547.1 mouse_genomes_project 13 53130513 53144720 + MGP_BALBcJ_P0037141 Grk6 protein_coding protein_coding MGP_BALBcJ_T0037142.1 MGP_BALBcJ_G0020547.1 mouse_genomes_project 13 53130513 53146473 + MGP_BALBcJ_P0037142 Grk6 protein_coding protein_coding MGP_BALBcJ_T0037143.1 MGP_BALBcJ_G0020547.1 mouse_genomes_project 13 53130618 53146633 + MGP_BALBcJ_P0037143 Grk6 protein_coding unknown_likely_coding MGP_BALBcJ_T0036326.1 MGP_BALBcJ_G0020207.1 mouse_genomes_project 13 17020115 17200939 + Elmo1 protein_coding retained_intron MGP_BALBcJ_T0036327.1 MGP_BALBcJ_G0020207.1 mouse_genomes_project 13 17020138 17550137 + MGP_BALBcJ_P0036327 Elmo1 protein_coding protein_coding MGP_BALBcJ_T0036328.1 MGP_BALBcJ_G0020207.1 mouse_genomes_project 13 17042857 17284511 + Elmo1 protein_coding retained_intron MGP_BALBcJ_T0036329.1 MGP_BALBcJ_G0020207.1 mouse_genomes_project 13 17421595 17536281 + Elmo1 protein_coding retained_intron MGP_BALBcJ_T0036851.1 MGP_BALBcJ_G0020464.1 mouse_genomes_project 13 44077364 44086112 + MGP_BALBcJ_P0036851 Fam8a1 protein_coding protein_coding MGP_BALBcJ_T0036852.1 MGP_BALBcJ_G0020464.1 mouse_genomes_project 13 44079250 44081874 + Fam8a1 protein_coding retained_intron MGP_BALBcJ_T0006531.1 MGP_BALBcJ_G0005415.1 mouse_genomes_project 13 34714682 34715679 - Gm29458 lincRNA lincRNA MGP_BALBcJ_T0000890.1 MGP_BALBcJ_G0000821.1 mouse_genomes_project 13 99548563 99551979 + TEC TEC MGP_BALBcJ_T0036469.1 MGP_BALBcJ_G0020303.1 mouse_genomes_project 13 20723095 20723571 - MGP_BALBcJ_P0036469 Hist1h2ac protein_coding protein_coding MGP_BALBcJ_T0038085.1 MGP_BALBcJ_G0020875.1 mouse_genomes_project 13 106883133 106957300 + MGP_BALBcJ_P0038085 Elovl7 protein_coding protein_coding MGP_BALBcJ_T0037450.1 MGP_BALBcJ_G0020662.1 mouse_genomes_project 13 65521776 65532453 - MGP_BALBcJ_P0037450 protein_coding protein_coding MGP_BALBcJ_T0036165.1 MGP_BALBcJ_G0020155.1 mouse_genomes_project 13 4632329 4638105 - MGP_BALBcJ_P0036165 protein_coding protein_coding MGP_BALBcJ_T0037084.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52454806 52462207 + MGP_BALBcJ_P0037084 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037085.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52454832 52462199 + MGP_BALBcJ_P0037085 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037086.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52454892 52461617 + MGP_BALBcJ_P0037086 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037087.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52455024 52461548 + MGP_BALBcJ_P0037087 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037088.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52455024 52461652 + MGP_BALBcJ_P0037088 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037089.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52455074 52460578 + MGP_BALBcJ_P0037089 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037090.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52458169 52461595 + MGP_BALBcJ_P0037090 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037091.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52458300 52462206 + MGP_BALBcJ_P0037091 Tspan17 protein_coding protein_coding MGP_BALBcJ_T0037092.1 MGP_BALBcJ_G0020531.1 mouse_genomes_project 13 52460813 52462199 + Tspan17 protein_coding retained_intron MGP_BALBcJ_T0003479.1 MGP_BALBcJ_G0003173.1 mouse_genomes_project 13 98723401 98724946 - BC001981 antisense antisense MGP_BALBcJ_T0003480.1 MGP_BALBcJ_G0003173.1 mouse_genomes_project 13 98724641 98724944 - BC001981 antisense antisense MGP_BALBcJ_T0003417.1 MGP_BALBcJ_G0003136.1 mouse_genomes_project 13 19750349 19751161 + antisense antisense MGP_BALBcJ_T0036347.1 MGP_BALBcJ_G0020218.1 mouse_genomes_project 13 18282095 18297790 - MGP_BALBcJ_P0036347 Zkscan3 protein_coding protein_coding MGP_BALBcJ_T0036348.1 MGP_BALBcJ_G0020218.1 mouse_genomes_project 13 18282095 18297832 - MGP_BALBcJ_P0036348 Zkscan3 protein_coding protein_coding MGP_BALBcJ_T0036349.1 MGP_BALBcJ_G0020218.1 mouse_genomes_project 13 18283687 18289836 - MGP_BALBcJ_P0036349 Zkscan3 protein_coding protein_coding MGP_BALBcJ_T0036350.1 MGP_BALBcJ_G0020218.1 mouse_genomes_project 13 18284373 18297772 - MGP_BALBcJ_P0036350 Zkscan3 protein_coding protein_coding MGP_BALBcJ_T0036351.1 MGP_BALBcJ_G0020218.1 mouse_genomes_project 13 18288304 18297793 - MGP_BALBcJ_P0036351 Zkscan3 protein_coding protein_coding MGP_BALBcJ_T0036352.1 MGP_BALBcJ_G0020218.1 mouse_genomes_project 13 18296620 18297747 - Zkscan3 protein_coding processed_transcript MGP_BALBcJ_T0017307.1 MGP_BALBcJ_G0015187.1 mouse_genomes_project 13 20803310 20804735 - 4930558J22Rik processed_transcript processed_transcript MGP_BALBcJ_T0037972.1 MGP_BALBcJ_G0020845.1 mouse_genomes_project 13 99434812 99451429 - MGP_BALBcJ_P0037972 Cenph protein_coding protein_coding MGP_BALBcJ_T0037973.1 MGP_BALBcJ_G0020845.1 mouse_genomes_project 13 99447720 99451313 - Cenph protein_coding retained_intron MGP_BALBcJ_T0037386.1 MGP_BALBcJ_G0020627.1 mouse_genomes_project 13 62268851 62294592 + MGP_BALBcJ_P0037386 Habp4 protein_coding protein_coding MGP_BALBcJ_T0037302.1 MGP_BALBcJ_G0020591.1 mouse_genomes_project 13 57454360 57461898 - MGP_BALBcJ_P0037302 Spata31d1a protein_coding protein_coding MGP_BALBcJ_T0036929.1 MGP_BALBcJ_G0020490.1 mouse_genomes_project 13 47079739 47096169 + MGP_BALBcJ_P0036929 Ogn protein_coding protein_coding MGP_BALBcJ_T0037466.1 MGP_BALBcJ_G0020671.1 mouse_genomes_project 13 65818347 65845289 - MGP_BALBcJ_P0037466 Zfp729a protein_coding protein_coding MGP_BALBcJ_T0036492.1 MGP_BALBcJ_G0020319.1 mouse_genomes_project 13 20948368 20965498 - MGP_BALBcJ_P0036492 Slc17a4 protein_coding protein_coding MGP_BALBcJ_T0036493.1 MGP_BALBcJ_G0020319.1 mouse_genomes_project 13 20948519 20965500 - MGP_BALBcJ_P0036493 Slc17a4 protein_coding protein_coding MGP_BALBcJ_T0003425.1 MGP_BALBcJ_G0003143.1 mouse_genomes_project 13 31175388 31178039 + 1110046J04Rik antisense antisense MGP_BALBcJ_T0003426.1 MGP_BALBcJ_G0003143.1 mouse_genomes_project 13 31175887 31197789 + 1110046J04Rik antisense antisense MGP_BALBcJ_T0036812.1 MGP_BALBcJ_G0020447.1 mouse_genomes_project 13 40582434 40683982 - MGP_BALBcJ_P0036812 Gfod1 protein_coding protein_coding MGP_BALBcJ_T0037788.1 MGP_BALBcJ_G0020777.1 mouse_genomes_project 13 92083519 92104511 - MGP_BALBcJ_P0037788 Bhmt protein_coding protein_coding MGP_BALBcJ_T0037789.1 MGP_BALBcJ_G0020777.1 mouse_genomes_project 13 92088357 92104116 - Bhmt protein_coding retained_intron MGP_BALBcJ_T0037793.1 MGP_BALBcJ_G0020780.1 mouse_genomes_project 13 92242727 92417160 + MGP_BALBcJ_P0037793 Arsb protein_coding protein_coding MGP_BALBcJ_T0006536.1 MGP_BALBcJ_G0005420.1 mouse_genomes_project 13 39415839 39416767 + Gm28707 lincRNA lincRNA MGP_BALBcJ_T0036124.1 MGP_BALBcJ_G0020140.1 mouse_genomes_project 13 539437 544095 - MGP_BALBcJ_P0036124 Ucn3 protein_coding protein_coding MGP_BALBcJ_T0036843.1 MGP_BALBcJ_G0020459.1 mouse_genomes_project 13 42933227 43357363 - MGP_BALBcJ_P0036843 Atxn1 protein_coding protein_coding MGP_BALBcJ_T0036844.1 MGP_BALBcJ_G0020459.1 mouse_genomes_project 13 42933227 43357363 - MGP_BALBcJ_P0036844 Atxn1 protein_coding protein_coding MGP_BALBcJ_T0036845.1 MGP_BALBcJ_G0020459.1 mouse_genomes_project 13 42933227 43357363 - MGP_BALBcJ_P0036845 Atxn1 protein_coding protein_coding MGP_BALBcJ_T0036292.1 MGP_BALBcJ_G0020193.1 mouse_genomes_project 13 13676185 14530702 - MGP_BALBcJ_P0036292 Sugct protein_coding protein_coding MGP_BALBcJ_T0037835.1 MGP_BALBcJ_G0020794.1 mouse_genomes_project 13 94117252 94134268 - MGP_BALBcJ_P0037835 F2r protein_coding protein_coding MGP_BALBcJ_T0099363.1 MGP_BALBcJ_G0037399.1 mouse_genomes_project 13 20702879 20702983 + Gm22452 snRNA snRNA MGP_BALBcJ_T0102210.1 MGP_BALBcJ_G0040026.1 mouse_genomes_project 13 20151416 20152321 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011342.1 MGP_BALBcJ_G0009467.1 mouse_genomes_project 13 107174512 107174707 - Gm28016 misc_RNA misc_RNA MGP_BALBcJ_T0037512.1 MGP_BALBcJ_G0020696.1 mouse_genomes_project 13 71628408 71637075 - MGP_BALBcJ_P0037512 Ndufs6 protein_coding protein_coding MGP_BALBcJ_T0037513.1 MGP_BALBcJ_G0020696.1 mouse_genomes_project 13 71628413 71636985 - MGP_BALBcJ_P0037513 Ndufs6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0009938.1 MGP_BALBcJ_G0008063.1 mouse_genomes_project 13 94902854 94902967 + Gm25213 miRNA miRNA MGP_BALBcJ_T0036583.1 MGP_BALBcJ_G0020353.1 mouse_genomes_project 13 24751779 24760833 - MGP_BALBcJ_P0036583 Prl7a2 protein_coding protein_coding MGP_BALBcJ_T0036534.1 MGP_BALBcJ_G0020328.1 mouse_genomes_project 13 21879819 21893395 - MGP_BALBcJ_P0036534 Acot13 protein_coding protein_coding MGP_BALBcJ_T0036149.1 MGP_BALBcJ_G0020152.1 mouse_genomes_project 13 2993865 2996317 + MGP_BALBcJ_P0036149 Gm28465 protein_coding protein_coding MGP_BALBcJ_T0036643.1 MGP_BALBcJ_G0020383.1 mouse_genomes_project 13 30313368 30324301 + MGP_BALBcJ_P0036643 Serpinb1b protein_coding protein_coding MGP_BALBcJ_T0036860.1 MGP_BALBcJ_G0020467.1 mouse_genomes_project 13 44425281 44427564 - MGP_BALBcJ_P0036860 Nhlrc1 protein_coding protein_coding MGP_BALBcJ_T0009898.1 MGP_BALBcJ_G0008023.1 mouse_genomes_project 13 20545603 20545712 + n-TStga1 miRNA miRNA MGP_BALBcJ_T0013079.1 MGP_BALBcJ_G0011176.1 mouse_genomes_project 15 97903220 97903490 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099470.1 MGP_BALBcJ_G0037506.1 mouse_genomes_project 15 57252197 57252304 + Gm25875 snRNA snRNA MGP_BALBcJ_T0013073.1 MGP_BALBcJ_G0011170.1 mouse_genomes_project 15 88716486 88716717 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041332.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73610348 73620855 - MGP_BALBcJ_P0041332 Oplah protein_coding protein_coding MGP_BALBcJ_T0041333.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73610354 73611244 - Oplah protein_coding retained_intron MGP_BALBcJ_T0041334.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73610354 73620999 - MGP_BALBcJ_P0041334 Oplah protein_coding protein_coding MGP_BALBcJ_T0041335.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73611094 73611792 - Oplah protein_coding retained_intron MGP_BALBcJ_T0041336.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73614338 73614867 - Oplah protein_coding retained_intron MGP_BALBcJ_T0041337.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73614627 73616114 - Oplah protein_coding retained_intron MGP_BALBcJ_T0041338.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73614705 73621143 - MGP_BALBcJ_P0041338 Oplah protein_coding protein_coding MGP_BALBcJ_T0041339.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73615815 73616952 - Oplah protein_coding processed_transcript MGP_BALBcJ_T0041340.1 MGP_BALBcJ_G0021949.1 mouse_genomes_project 15 73620240 73642163 - MGP_BALBcJ_P0041340 Oplah protein_coding protein_coding MGP_BALBcJ_T0099489.1 MGP_BALBcJ_G0037525.1 mouse_genomes_project 15 86658218 86658325 + Gm23144 snRNA snRNA MGP_BALBcJ_T0042728.1 MGP_BALBcJ_G0022379.1 mouse_genomes_project 15 100564995 100574491 + MGP_BALBcJ_P0042728 Amhr2 protein_coding protein_coding MGP_BALBcJ_T0042729.1 MGP_BALBcJ_G0022379.1 mouse_genomes_project 15 100572015 100574406 + MGP_BALBcJ_P0042729 Amhr2 protein_coding protein_coding MGP_BALBcJ_T0042730.1 MGP_BALBcJ_G0022379.1 mouse_genomes_project 15 100572179 100572728 + Amhr2 protein_coding retained_intron MGP_BALBcJ_T0041707.1 MGP_BALBcJ_G0022053.1 mouse_genomes_project 15 77323917 77342235 - MGP_BALBcJ_P0041707 Nptxr protein_coding protein_coding MGP_BALBcJ_T0041708.1 MGP_BALBcJ_G0022053.1 mouse_genomes_project 15 77323918 77342292 - MGP_BALBcJ_P0041708 Nptxr protein_coding protein_coding MGP_BALBcJ_T0041709.1 MGP_BALBcJ_G0022053.1 mouse_genomes_project 15 77326826 77328562 - Nptxr protein_coding processed_transcript MGP_BALBcJ_T0006791.1 MGP_BALBcJ_G0005594.1 mouse_genomes_project 15 99358766 99362170 + 6030408B16Rik lincRNA lincRNA MGP_BALBcJ_T0006792.1 MGP_BALBcJ_G0005594.1 mouse_genomes_project 15 99358786 99362975 + 6030408B16Rik lincRNA lincRNA MGP_BALBcJ_T0041572.1 MGP_BALBcJ_G0022016.1 mouse_genomes_project 15 76071497 76096451 + MGP_BALBcJ_P0041572 Cyth4 protein_coding protein_coding MGP_BALBcJ_T0100766.1 MGP_BALBcJ_G0038802.1 mouse_genomes_project 15 78000794 78000931 - Gm23220 snoRNA snoRNA MGP_BALBcJ_T0042460.1 MGP_BALBcJ_G0022284.1 mouse_genomes_project 15 97044726 97048534 + MGP_BALBcJ_P0042460 Prph protein_coding protein_coding MGP_BALBcJ_T0042461.1 MGP_BALBcJ_G0022284.1 mouse_genomes_project 15 97044726 97048534 + MGP_BALBcJ_P0042461 Prph protein_coding protein_coding MGP_BALBcJ_T0006732.1 MGP_BALBcJ_G0005556.1 mouse_genomes_project 15 34820845 34843301 + Gm15942 lincRNA lincRNA MGP_BALBcJ_T0011377.1 MGP_BALBcJ_G0009502.1 mouse_genomes_project 15 100606017 100606199 + Gm27406 misc_RNA misc_RNA MGP_BALBcJ_T0040828.1 MGP_BALBcJ_G0021782.1 mouse_genomes_project 15 36205710 36707867 + MGP_BALBcJ_P0040828 Rims2 protein_coding protein_coding MGP_BALBcJ_T0040829.1 MGP_BALBcJ_G0021782.1 mouse_genomes_project 15 36205741 36707691 + MGP_BALBcJ_P0040829 Rims2 protein_coding protein_coding MGP_BALBcJ_T0040830.1 MGP_BALBcJ_G0021782.1 mouse_genomes_project 15 36278963 36349166 + MGP_BALBcJ_P0040830 Rims2 protein_coding unknown_likely_coding MGP_BALBcJ_T0040831.1 MGP_BALBcJ_G0021782.1 mouse_genomes_project 15 36394118 36641484 + MGP_BALBcJ_P0040831 Rims2 protein_coding unknown_likely_coding MGP_BALBcJ_T0040832.1 MGP_BALBcJ_G0021782.1 mouse_genomes_project 15 36684775 36710307 + MGP_BALBcJ_P0040832 Rims2 protein_coding unknown_likely_coding MGP_BALBcJ_T0013032.1 MGP_BALBcJ_G0011129.1 mouse_genomes_project 15 20006553 20008308 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042832.1 MGP_BALBcJ_G0022410.1 mouse_genomes_project 15 101631411 101658186 + MGP_BALBcJ_P0042832 Pde1b protein_coding protein_coding MGP_BALBcJ_T0099482.1 MGP_BALBcJ_G0037518.1 mouse_genomes_project 15 74552024 74552170 - Gm24056 snRNA snRNA MGP_BALBcJ_T0041767.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501254 78523229 + MGP_BALBcJ_P0041767 Adsl protein_coding protein_coding MGP_BALBcJ_T0041768.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501255 78521289 + MGP_BALBcJ_P0041768 Adsl protein_coding protein_coding MGP_BALBcJ_T0041769.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501268 78502877 + Adsl protein_coding retained_intron MGP_BALBcJ_T0041770.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501276 78521400 + MGP_BALBcJ_P0041770 Adsl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041771.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501283 78516770 + MGP_BALBcJ_P0041771 Adsl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041772.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501283 78521029 + MGP_BALBcJ_P0041772 Adsl protein_coding protein_coding MGP_BALBcJ_T0041773.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501301 78518404 + MGP_BALBcJ_P0041773 Adsl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041774.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501306 78508663 + Adsl protein_coding retained_intron MGP_BALBcJ_T0041775.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78501541 78505062 + MGP_BALBcJ_P0041775 Adsl protein_coding protein_coding MGP_BALBcJ_T0041776.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78514013 78516645 + Adsl protein_coding retained_intron MGP_BALBcJ_T0041777.1 MGP_BALBcJ_G0022071.1 mouse_genomes_project 15 78516723 78521036 + MGP_BALBcJ_P0041777 Adsl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040440.1 MGP_BALBcJ_G0021656.1 mouse_genomes_project 15 1823601 1901823 - MGP_BALBcJ_P0040440 C7 protein_coding protein_coding MGP_BALBcJ_T0042317.1 MGP_BALBcJ_G0022235.1 mouse_genomes_project 15 94522165 94595099 - MGP_BALBcJ_P0042317 Slc38a1 protein_coding protein_coding MGP_BALBcJ_T0042318.1 MGP_BALBcJ_G0022235.1 mouse_genomes_project 15 94522165 94594718 - MGP_BALBcJ_P0042318 Slc38a1 protein_coding protein_coding MGP_BALBcJ_T0042319.1 MGP_BALBcJ_G0022235.1 mouse_genomes_project 15 94522165 94595852 - MGP_BALBcJ_P0042319 Slc38a1 protein_coding protein_coding MGP_BALBcJ_T0013075.1 MGP_BALBcJ_G0011172.1 mouse_genomes_project 15 89402414 89403570 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040422.1 MGP_BALBcJ_G0021650.1 mouse_genomes_project 15 820407 833778 - MGP_BALBcJ_P0040422 Fbxo4 protein_coding protein_coding MGP_BALBcJ_T0040423.1 MGP_BALBcJ_G0021650.1 mouse_genomes_project 15 823350 827141 - Fbxo4 protein_coding processed_transcript MGP_BALBcJ_T0040424.1 MGP_BALBcJ_G0021650.1 mouse_genomes_project 15 825564 826263 - Fbxo4 protein_coding retained_intron MGP_BALBcJ_T0040819.1 MGP_BALBcJ_G0021776.1 mouse_genomes_project 15 35797243 35827682 + MGP_BALBcJ_P0040819 Atp6v1c1 protein_coding protein_coding MGP_BALBcJ_T0042508.1 MGP_BALBcJ_G0022300.1 mouse_genomes_project 15 97600147 97604010 + MGP_BALBcJ_P0042508 Aqp6 protein_coding protein_coding MGP_BALBcJ_T0006726.1 MGP_BALBcJ_G0005551.1 mouse_genomes_project 15 15114177 15203413 - 4921515E04Rik lincRNA lincRNA MGP_BALBcJ_T0042169.1 MGP_BALBcJ_G0022190.1 mouse_genomes_project 15 87154115 87155872 + MGP_BALBcJ_P0042169 Adm2 protein_coding protein_coding MGP_BALBcJ_T0013069.1 MGP_BALBcJ_G0011166.1 mouse_genomes_project 15 82895613 82896031 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017414.1 MGP_BALBcJ_G0015232.1 mouse_genomes_project 15 53831682 53836195 + Has2os processed_transcript antisense MGP_BALBcJ_T0017415.1 MGP_BALBcJ_G0015232.1 mouse_genomes_project 15 53835286 53923557 + Has2os processed_transcript antisense MGP_BALBcJ_T0017416.1 MGP_BALBcJ_G0015232.1 mouse_genomes_project 15 53835688 53923273 + Has2os processed_transcript antisense MGP_BALBcJ_T0017417.1 MGP_BALBcJ_G0015232.1 mouse_genomes_project 15 53908760 53923236 + Has2os processed_transcript lincRNA MGP_BALBcJ_T0010071.1 MGP_BALBcJ_G0008196.1 mouse_genomes_project 15 96494295 96494412 - Mir1291 miRNA miRNA MGP_BALBcJ_T0042211.1 MGP_BALBcJ_G0022201.1 mouse_genomes_project 15 87265095 87266375 + MGP_BALBcJ_P0042211 C730034F03Rik protein_coding protein_coding MGP_BALBcJ_T0013051.1 MGP_BALBcJ_G0011148.1 mouse_genomes_project 15 59357731 59358843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003594.1 MGP_BALBcJ_G0003260.1 mouse_genomes_project 15 76653214 76720891 + Gm10863 antisense antisense MGP_BALBcJ_T0003595.1 MGP_BALBcJ_G0003260.1 mouse_genomes_project 15 76653231 76720676 + Gm10863 antisense antisense MGP_BALBcJ_T0003596.1 MGP_BALBcJ_G0003260.1 mouse_genomes_project 15 76653239 76732448 + Gm10863 antisense antisense MGP_BALBcJ_T0003597.1 MGP_BALBcJ_G0003260.1 mouse_genomes_project 15 76653239 76721005 + Gm10863 antisense antisense MGP_BALBcJ_T0003598.1 MGP_BALBcJ_G0003260.1 mouse_genomes_project 15 76713810 76722346 + Gm10863 antisense antisense MGP_BALBcJ_T0041114.1 MGP_BALBcJ_G0021886.1 mouse_genomes_project 15 70333463 70551899 - MGP_BALBcJ_P0041114 Ptk2 protein_coding protein_coding MGP_BALBcJ_T0041115.1 MGP_BALBcJ_G0021886.1 mouse_genomes_project 15 70344237 70490827 - MGP_BALBcJ_P0041115 Ptk2 protein_coding protein_coding MGP_BALBcJ_T0040670.1 MGP_BALBcJ_G0021723.1 mouse_genomes_project 15 24521386 24650572 + MGP_BALBcJ_P0040670 Ank protein_coding protein_coding MGP_BALBcJ_T0040671.1 MGP_BALBcJ_G0021723.1 mouse_genomes_project 15 24627123 24648826 + Ank protein_coding retained_intron MGP_BALBcJ_T0040638.1 MGP_BALBcJ_G0021711.1 mouse_genomes_project 15 17719524 17721056 - MGP_BALBcJ_P0040638 Acot10 protein_coding protein_coding MGP_BALBcJ_T0041961.1 MGP_BALBcJ_G0022125.1 mouse_genomes_project 15 80912274 80931196 - MGP_BALBcJ_P0041961 Cyb5r3 protein_coding protein_coding MGP_BALBcJ_T0041962.1 MGP_BALBcJ_G0022125.1 mouse_genomes_project 15 80915842 80929110 - MGP_BALBcJ_P0041962 Cyb5r3 protein_coding protein_coding MGP_BALBcJ_T0041963.1 MGP_BALBcJ_G0022125.1 mouse_genomes_project 15 80919163 80928781 - MGP_BALBcJ_P0041963 Cyb5r3 protein_coding protein_coding MGP_BALBcJ_T0041057.1 MGP_BALBcJ_G0021869.1 mouse_genomes_project 15 63177754 63473610 - MGP_BALBcJ_P0041057 Kcnq3 protein_coding protein_coding MGP_BALBcJ_T0041058.1 MGP_BALBcJ_G0021869.1 mouse_genomes_project 15 63216497 63286606 - Kcnq3 protein_coding processed_transcript MGP_BALBcJ_T0041059.1 MGP_BALBcJ_G0021869.1 mouse_genomes_project 15 63470462 63473446 - Kcnq3 protein_coding retained_intron MGP_BALBcJ_T0013064.1 MGP_BALBcJ_G0011161.1 mouse_genomes_project 15 77220310 77231014 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100747.1 MGP_BALBcJ_G0038783.1 mouse_genomes_project 15 36045094 36045225 + Gm24789 snoRNA snoRNA MGP_BALBcJ_T0013031.1 MGP_BALBcJ_G0011128.1 mouse_genomes_project 15 15199313 15202282 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042004.1 MGP_BALBcJ_G0022138.1 mouse_genomes_project 15 81886464 81897559 - MGP_BALBcJ_P0042004 Pnpla5 protein_coding protein_coding MGP_BALBcJ_T0102249.1 MGP_BALBcJ_G0040065.1 mouse_genomes_project 15 72106995 72107146 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0041976.1 MGP_BALBcJ_G0022132.1 mouse_genomes_project 15 81330690 81341100 + MGP_BALBcJ_P0041976 Tspo protein_coding protein_coding MGP_BALBcJ_T0041975.1 MGP_BALBcJ_G0022131.1 mouse_genomes_project 15 81313700 81322615 - MGP_BALBcJ_P0041975 Mcat protein_coding protein_coding MGP_BALBcJ_T0099500.1 MGP_BALBcJ_G0037536.1 mouse_genomes_project 15 100745136 100745243 - Gm25141 snRNA snRNA MGP_BALBcJ_T0042386.1 MGP_BALBcJ_G0022253.1 mouse_genomes_project 15 96153810 96164359 - MGP_BALBcJ_P0042386 Olfr288 protein_coding protein_coding MGP_BALBcJ_T0042387.1 MGP_BALBcJ_G0022253.1 mouse_genomes_project 15 96157120 96164262 - Olfr288 protein_coding processed_transcript MGP_BALBcJ_T0040632.1 MGP_BALBcJ_G0021710.1 mouse_genomes_project 15 15849141 16045374 + MGP_BALBcJ_P0040632 Cdh10 protein_coding protein_coding MGP_BALBcJ_T0040633.1 MGP_BALBcJ_G0021710.1 mouse_genomes_project 15 15849152 15934008 + Cdh10 protein_coding retained_intron MGP_BALBcJ_T0040634.1 MGP_BALBcJ_G0021710.1 mouse_genomes_project 15 15849171 16001334 + Cdh10 protein_coding retained_intron MGP_BALBcJ_T0040635.1 MGP_BALBcJ_G0021710.1 mouse_genomes_project 15 15850523 16045374 + MGP_BALBcJ_P0040635 Cdh10 protein_coding protein_coding MGP_BALBcJ_T0040636.1 MGP_BALBcJ_G0021710.1 mouse_genomes_project 15 15930487 16044820 + MGP_BALBcJ_P0040636 Cdh10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040637.1 MGP_BALBcJ_G0021710.1 mouse_genomes_project 15 16038116 16045374 + Cdh10 protein_coding retained_intron MGP_BALBcJ_T0042684.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100307710 100319438 + MGP_BALBcJ_P0042684 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042685.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100307721 100319431 + MGP_BALBcJ_P0042685 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042686.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100307753 100312444 + MGP_BALBcJ_P0042686 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042687.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100307771 100312966 + MGP_BALBcJ_P0042687 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042688.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100308671 100319439 + MGP_BALBcJ_P0042688 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042689.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100308808 100312880 + MGP_BALBcJ_P0042689 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042690.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100308842 100312868 + MGP_BALBcJ_P0042690 Zfp740 protein_coding protein_coding MGP_BALBcJ_T0042691.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100311719 100312750 + Zfp740 protein_coding retained_intron MGP_BALBcJ_T0042692.1 MGP_BALBcJ_G0022369.1 mouse_genomes_project 15 100312363 100319434 + Zfp740 protein_coding retained_intron MGP_BALBcJ_T0041467.1 MGP_BALBcJ_G0021978.1 mouse_genomes_project 15 74028102 74034932 - MGP_BALBcJ_P0041467 Lrrc24 protein_coding protein_coding MGP_BALBcJ_T0041468.1 MGP_BALBcJ_G0021978.1 mouse_genomes_project 15 74029033 74031242 - Lrrc24 protein_coding retained_intron MGP_BALBcJ_T0041469.1 MGP_BALBcJ_G0021978.1 mouse_genomes_project 15 74032366 74034918 - Lrrc24 protein_coding retained_intron MGP_BALBcJ_T0041470.1 MGP_BALBcJ_G0021978.1 mouse_genomes_project 15 74034220 74036595 - MGP_BALBcJ_P0041470 Lrrc24 protein_coding protein_coding MGP_BALBcJ_T0010015.1 MGP_BALBcJ_G0008140.1 mouse_genomes_project 15 32731335 32731423 - Mir599 miRNA miRNA MGP_BALBcJ_T0042660.1 MGP_BALBcJ_G0022351.1 mouse_genomes_project 15 99855421 99863712 - MGP_BALBcJ_P0042660 Krt74 protein_coding protein_coding MGP_BALBcJ_T0003579.1 MGP_BALBcJ_G0003246.1 mouse_genomes_project 15 34489648 34490942 + Gm28221 antisense antisense MGP_BALBcJ_T0041511.1 MGP_BALBcJ_G0021994.1 mouse_genomes_project 15 75133146 75149445 + Apol7b protein_coding retained_intron MGP_BALBcJ_T0041513.1 MGP_BALBcJ_G0021994.1 mouse_genomes_project 15 75133199 75158281 + MGP_BALBcJ_P0041513 Apol7b protein_coding protein_coding MGP_BALBcJ_T0040894.1 MGP_BALBcJ_G0021810.1 mouse_genomes_project 15 50217909 50501878 - MGP_BALBcJ_P0040894 Ext1 protein_coding protein_coding MGP_BALBcJ_T0040895.1 MGP_BALBcJ_G0021810.1 mouse_genomes_project 15 50222535 50501378 - MGP_BALBcJ_P0040895 Ext1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040896.1 MGP_BALBcJ_G0021810.1 mouse_genomes_project 15 50236968 50351463 - MGP_BALBcJ_P0040896 Ext1 protein_coding protein_coding MGP_BALBcJ_T0040897.1 MGP_BALBcJ_G0021810.1 mouse_genomes_project 15 50243511 50261609 - Ext1 protein_coding retained_intron MGP_BALBcJ_T0041514.1 MGP_BALBcJ_G0021996.1 mouse_genomes_project 15 75174030 75181544 + MGP_BALBcJ_P0041514 protein_coding protein_coding MGP_BALBcJ_T0041516.1 MGP_BALBcJ_G0021996.1 mouse_genomes_project 15 75174076 75181544 + MGP_BALBcJ_P0041516 protein_coding protein_coding MGP_BALBcJ_T0041142.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71647984 71721551 + MGP_BALBcJ_P0041142 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041143.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71648560 71721551 + MGP_BALBcJ_P0041143 Adgrb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041144.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71648953 71721551 + MGP_BALBcJ_P0041144 Adgrb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041145.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71672506 71675638 + MGP_BALBcJ_P0041145 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041146.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71693170 71706206 + MGP_BALBcJ_P0041146 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041147.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71695264 71704294 + MGP_BALBcJ_P0041147 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041148.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71696012 71721551 + MGP_BALBcJ_P0041148 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041149.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71696027 71721530 + MGP_BALBcJ_P0041149 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041150.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71696075 71704948 + MGP_BALBcJ_P0041150 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041151.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71703041 71721552 + Adgrb1 protein_coding processed_transcript MGP_BALBcJ_T0041152.1 MGP_BALBcJ_G0021893.1 mouse_genomes_project 15 71706229 71721552 + MGP_BALBcJ_P0041152 Adgrb1 protein_coding protein_coding MGP_BALBcJ_T0041510.1 MGP_BALBcJ_G0021993.1 mouse_genomes_project 15 74996017 75007947 - MGP_BALBcJ_P0041510 Apol10b protein_coding protein_coding MGP_BALBcJ_T0003624.1 MGP_BALBcJ_G0003282.1 mouse_genomes_project 15 99191082 99193132 - Gm16031 antisense antisense MGP_BALBcJ_T0042435.1 MGP_BALBcJ_G0022273.1 mouse_genomes_project 15 96705346 96709172 - MGP_BALBcJ_P0042435 Fkbp11 protein_coding protein_coding MGP_BALBcJ_T0003622.1 MGP_BALBcJ_G0003280.1 mouse_genomes_project 15 98643644 98646343 + Gm27209 antisense antisense MGP_BALBcJ_T0042668.1 MGP_BALBcJ_G0022358.1 mouse_genomes_project 15 100018798 100025025 - MGP_BALBcJ_P0042668 Krt4 protein_coding protein_coding MGP_BALBcJ_T0100731.1 MGP_BALBcJ_G0038767.1 mouse_genomes_project 15 12718770 12718898 + Gm25550 snoRNA snoRNA MGP_BALBcJ_T0010042.1 MGP_BALBcJ_G0008167.1 mouse_genomes_project 15 77132455 77132581 - Gm27903 miRNA miRNA MGP_BALBcJ_T0042505.1 MGP_BALBcJ_G0022298.1 mouse_genomes_project 15 97578085 97583313 + MGP_BALBcJ_P0042505 Aqp2 protein_coding protein_coding MGP_BALBcJ_T0006764.1 MGP_BALBcJ_G0005576.1 mouse_genomes_project 15 77280137 77294832 + Gm16576 lincRNA lincRNA MGP_BALBcJ_T0098842.1 MGP_BALBcJ_G0036892.1 mouse_genomes_project 15 34364610 34365370 + Gm16137 sense_intronic sense_intronic MGP_BALBcJ_T0041646.1 MGP_BALBcJ_G0022036.1 mouse_genomes_project 15 76756268 76760028 - MGP_BALBcJ_P0041646 Slc16a8 protein_coding protein_coding MGP_BALBcJ_T0042087.1 MGP_BALBcJ_G0022168.1 mouse_genomes_project 15 84024067 84306401 + MGP_BALBcJ_P0042087 Tbc1d22a protein_coding protein_coding MGP_BALBcJ_T0041099.1 MGP_BALBcJ_G0021879.1 mouse_genomes_project 15 66092353 66252842 + MGP_BALBcJ_P0041099 Khdrbs3 protein_coding protein_coding MGP_BALBcJ_T0040823.1 MGP_BALBcJ_G0021779.1 mouse_genomes_project 15 36083704 36094180 + MGP_BALBcJ_P0040823 Cthrc1 protein_coding protein_coding MGP_BALBcJ_T0040824.1 MGP_BALBcJ_G0021779.1 mouse_genomes_project 15 36083853 36088397 + Cthrc1 protein_coding processed_transcript MGP_BALBcJ_T0040825.1 MGP_BALBcJ_G0021779.1 mouse_genomes_project 15 36091130 36094182 + Cthrc1 protein_coding retained_intron MGP_BALBcJ_T0102250.1 MGP_BALBcJ_G0040066.1 mouse_genomes_project 15 72141728 72143589 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000935.1 MGP_BALBcJ_G0000866.1 mouse_genomes_project 15 65500216 65503139 - TEC TEC MGP_BALBcJ_T0042212.1 MGP_BALBcJ_G0022202.1 mouse_genomes_project 15 87289260 87300240 + MGP_BALBcJ_P0042212 Mapk8ip2 protein_coding protein_coding MGP_BALBcJ_T0042213.1 MGP_BALBcJ_G0022202.1 mouse_genomes_project 15 87290398 87292454 + MGP_BALBcJ_P0042213 Mapk8ip2 protein_coding protein_coding MGP_BALBcJ_T0011373.1 MGP_BALBcJ_G0009498.1 mouse_genomes_project 15 89466356 89466642 - Gm25389 misc_RNA misc_RNA MGP_BALBcJ_T0042423.1 MGP_BALBcJ_G0022269.1 mouse_genomes_project 15 96612170 96625191 + MGP_BALBcJ_P0042423 Cacnb3 protein_coding protein_coding MGP_BALBcJ_T0042424.1 MGP_BALBcJ_G0022269.1 mouse_genomes_project 15 96614883 96625191 + MGP_BALBcJ_P0042424 Cacnb3 protein_coding protein_coding MGP_BALBcJ_T0041902.1 MGP_BALBcJ_G0022101.1 mouse_genomes_project 15 79764466 79822650 + MGP_BALBcJ_P0041902 Srebf2 protein_coding protein_coding MGP_BALBcJ_T0040904.1 MGP_BALBcJ_G0021814.1 mouse_genomes_project 15 51565811 51618796 + MGP_BALBcJ_P0040904 Colec10 protein_coding protein_coding MGP_BALBcJ_T0042388.1 MGP_BALBcJ_G0022254.1 mouse_genomes_project 15 96176806 96190884 - MGP_BALBcJ_P0042388 Olfr287 protein_coding protein_coding MGP_BALBcJ_T0099451.1 MGP_BALBcJ_G0037487.1 mouse_genomes_project 15 15040485 15040592 - Gm24713 snRNA snRNA MGP_BALBcJ_T0099483.1 MGP_BALBcJ_G0037519.1 mouse_genomes_project 15 75285770 75285870 - Gm22107 snRNA snRNA MGP_BALBcJ_T0003582.1 MGP_BALBcJ_G0003249.1 mouse_genomes_project 15 54842485 54843299 - Gm16006 antisense antisense MGP_BALBcJ_T0040852.1 MGP_BALBcJ_G0021791.1 mouse_genomes_project 15 40080137 40229001 - MGP_BALBcJ_P0040852 Rspo2 protein_coding protein_coding MGP_BALBcJ_T0040732.1 MGP_BALBcJ_G0021749.1 mouse_genomes_project 15 31568473 31602966 + MGP_BALBcJ_P0040732 Pop1 protein_coding protein_coding MGP_BALBcJ_T0040733.1 MGP_BALBcJ_G0021749.1 mouse_genomes_project 15 31568492 31602955 + MGP_BALBcJ_P0040733 Pop1 protein_coding protein_coding MGP_BALBcJ_T0040734.1 MGP_BALBcJ_G0021749.1 mouse_genomes_project 15 31581875 31584161 + Pop1 protein_coding retained_intron MGP_BALBcJ_T0040735.1 MGP_BALBcJ_G0021749.1 mouse_genomes_project 15 31586138 31589981 + Pop1 protein_coding processed_transcript MGP_BALBcJ_T0040736.1 MGP_BALBcJ_G0021749.1 mouse_genomes_project 15 31587752 31601479 + Pop1 protein_coding retained_intron MGP_BALBcJ_T0040737.1 MGP_BALBcJ_G0021749.1 mouse_genomes_project 15 31598462 31601549 + Pop1 protein_coding retained_intron MGP_BALBcJ_T0042037.1 MGP_BALBcJ_G0022150.1 mouse_genomes_project 15 82719211 82762997 - MGP_BALBcJ_P0042037 5031439G07Rik protein_coding protein_coding MGP_BALBcJ_T0042038.1 MGP_BALBcJ_G0022150.1 mouse_genomes_project 15 82723261 82736242 - 5031439G07Rik protein_coding retained_intron MGP_BALBcJ_T0042039.1 MGP_BALBcJ_G0022150.1 mouse_genomes_project 15 82730945 82764239 - 5031439G07Rik protein_coding processed_transcript MGP_BALBcJ_T0040441.1 MGP_BALBcJ_G0021657.1 mouse_genomes_project 15 1934234 1948388 - MGP_BALBcJ_P0040441 Card6 protein_coding protein_coding MGP_BALBcJ_T0040442.1 MGP_BALBcJ_G0021657.1 mouse_genomes_project 15 1944189 1948333 - MGP_BALBcJ_P0040442 Card6 protein_coding protein_coding MGP_BALBcJ_T0041570.1 MGP_BALBcJ_G0022014.1 mouse_genomes_project 15 76009139 76016472 - MGP_BALBcJ_P0041570 Sstr3 protein_coding protein_coding MGP_BALBcJ_T0010041.1 MGP_BALBcJ_G0008166.1 mouse_genomes_project 15 76985896 76985977 + Gm44302 miRNA miRNA MGP_BALBcJ_T0040907.1 MGP_BALBcJ_G0021817.1 mouse_genomes_project 15 51985063 52067412 - MGP_BALBcJ_P0040907 Enpp2 protein_coding protein_coding MGP_BALBcJ_T0040908.1 MGP_BALBcJ_G0021817.1 mouse_genomes_project 15 51985066 52067268 - MGP_BALBcJ_P0040908 Enpp2 protein_coding protein_coding MGP_BALBcJ_T0040909.1 MGP_BALBcJ_G0021817.1 mouse_genomes_project 15 51985434 52067284 - MGP_BALBcJ_P0040909 Enpp2 protein_coding protein_coding MGP_BALBcJ_T0040910.1 MGP_BALBcJ_G0021817.1 mouse_genomes_project 15 51985531 52067227 - MGP_BALBcJ_P0040910 Enpp2 protein_coding protein_coding MGP_BALBcJ_T0041926.1 MGP_BALBcJ_G0022114.1 mouse_genomes_project 15 80240328 80244664 + MGP_BALBcJ_P0041926 protein_coding protein_coding MGP_BALBcJ_T0040411.1 MGP_BALBcJ_G0021648.1 mouse_genomes_project 15 139295 162272 - MGP_BALBcJ_P0040411 Ccdc152 protein_coding protein_coding MGP_BALBcJ_T0041159.1 MGP_BALBcJ_G0021895.1 mouse_genomes_project 15 71799324 71802810 - MGP_BALBcJ_P0041159 Arc protein_coding protein_coding MGP_BALBcJ_T0041160.1 MGP_BALBcJ_G0021895.1 mouse_genomes_project 15 71799324 71802812 - MGP_BALBcJ_P0041160 Arc protein_coding protein_coding MGP_BALBcJ_T0040971.1 MGP_BALBcJ_G0021835.1 mouse_genomes_project 15 55232899 55274529 - MGP_BALBcJ_P0040971 Atad2 protein_coding protein_coding MGP_BALBcJ_T0042523.1 MGP_BALBcJ_G0022302.1 mouse_genomes_project 15 97670967 97703012 + MGP_BALBcJ_P0042523 Asic1 protein_coding protein_coding MGP_BALBcJ_T0010086.1 MGP_BALBcJ_G0008211.1 mouse_genomes_project 15 101478925 101478996 - Mir6963 miRNA miRNA MGP_BALBcJ_T0006721.1 MGP_BALBcJ_G0005549.1 mouse_genomes_project 15 7571811 7577478 + 4930556M19Rik lincRNA lincRNA MGP_BALBcJ_T0042592.1 MGP_BALBcJ_G0022325.1 mouse_genomes_project 15 98725092 98739409 - MGP_BALBcJ_P0042592 Cela1 protein_coding protein_coding MGP_BALBcJ_T0006766.1 MGP_BALBcJ_G0005578.1 mouse_genomes_project 15 80726594 80731647 - Gm29019 lincRNA lincRNA MGP_BALBcJ_T0006767.1 MGP_BALBcJ_G0005578.1 mouse_genomes_project 15 80726652 80731528 - Gm29019 lincRNA lincRNA MGP_BALBcJ_T0042405.1 MGP_BALBcJ_G0022262.1 mouse_genomes_project 15 96428476 96429534 + MGP_BALBcJ_P0042405 Olfr281 protein_coding protein_coding MGP_BALBcJ_T0006736.1 MGP_BALBcJ_G0005560.1 mouse_genomes_project 15 35861701 36010810 - lincRNA lincRNA MGP_BALBcJ_T0041683.1 MGP_BALBcJ_G0022045.1 mouse_genomes_project 15 77092805 77149734 - MGP_BALBcJ_P0041683 Dmc1 protein_coding protein_coding MGP_BALBcJ_T0000927.1 MGP_BALBcJ_G0000858.1 mouse_genomes_project 15 5506261 5509229 - TEC TEC MGP_BALBcJ_T0013080.1 MGP_BALBcJ_G0011177.1 mouse_genomes_project 15 101726813 101728026 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017436.1 MGP_BALBcJ_G0015245.1 mouse_genomes_project 15 86891860 86895040 - 1810021B22Rik processed_transcript lincRNA MGP_BALBcJ_T0017437.1 MGP_BALBcJ_G0015245.1 mouse_genomes_project 15 86891860 86895892 - 1810021B22Rik processed_transcript antisense MGP_BALBcJ_T0017438.1 MGP_BALBcJ_G0015245.1 mouse_genomes_project 15 86891862 86896595 - 1810021B22Rik processed_transcript lincRNA MGP_BALBcJ_T0017439.1 MGP_BALBcJ_G0015245.1 mouse_genomes_project 15 86891862 86895954 - 1810021B22Rik processed_transcript antisense MGP_BALBcJ_T0017440.1 MGP_BALBcJ_G0015245.1 mouse_genomes_project 15 86891862 86895892 - 1810021B22Rik processed_transcript antisense MGP_BALBcJ_T0100741.1 MGP_BALBcJ_G0038777.1 mouse_genomes_project 15 29309701 29309772 - Snord123 snoRNA snoRNA MGP_BALBcJ_T0042079.1 MGP_BALBcJ_G0022166.1 mouse_genomes_project 15 83861775 83944279 + MGP_BALBcJ_P0042079 Gramd4 protein_coding protein_coding MGP_BALBcJ_T0042080.1 MGP_BALBcJ_G0022166.1 mouse_genomes_project 15 83862807 83944263 + MGP_BALBcJ_P0042080 Gramd4 protein_coding protein_coding MGP_BALBcJ_T0042081.1 MGP_BALBcJ_G0022166.1 mouse_genomes_project 15 83862952 83944276 + MGP_BALBcJ_P0042081 Gramd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042082.1 MGP_BALBcJ_G0022166.1 mouse_genomes_project 15 83872618 83928907 + Gramd4 protein_coding processed_transcript MGP_BALBcJ_T0042083.1 MGP_BALBcJ_G0022166.1 mouse_genomes_project 15 83879461 83896542 + Gramd4 protein_coding processed_transcript MGP_BALBcJ_T0041857.1 MGP_BALBcJ_G0022088.1 mouse_genomes_project 15 79445849 79446206 - MGP_BALBcJ_P0041857 Gm8444 protein_coding protein_coding MGP_BALBcJ_T0041076.1 MGP_BALBcJ_G0021875.1 mouse_genomes_project 15 64087056 64118929 + MGP_BALBcJ_P0041076 Wisp1 protein_coding protein_coding MGP_BALBcJ_T0041077.1 MGP_BALBcJ_G0021875.1 mouse_genomes_project 15 64087123 64115805 + MGP_BALBcJ_P0041077 Wisp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041078.1 MGP_BALBcJ_G0021875.1 mouse_genomes_project 15 64087244 64115183 + MGP_BALBcJ_P0041078 Wisp1 protein_coding protein_coding MGP_BALBcJ_T0041079.1 MGP_BALBcJ_G0021875.1 mouse_genomes_project 15 64105044 64114963 + Wisp1 protein_coding processed_transcript MGP_BALBcJ_T0003613.1 MGP_BALBcJ_G0003273.1 mouse_genomes_project 15 97426611 97434227 + Nckap5los antisense antisense MGP_BALBcJ_T0010058.1 MGP_BALBcJ_G0008183.1 mouse_genomes_project 15 81283845 81283922 + Gm24575 miRNA miRNA MGP_BALBcJ_T0099469.1 MGP_BALBcJ_G0037505.1 mouse_genomes_project 15 55974658 55974814 - Gm24041 snRNA snRNA MGP_BALBcJ_T0003610.1 MGP_BALBcJ_G0003270.1 mouse_genomes_project 15 96060939 96063428 + Gm26513 antisense antisense MGP_BALBcJ_T0041732.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77448650 77465635 - MGP_BALBcJ_P0041732 Cbx7 protein_coding protein_coding MGP_BALBcJ_T0041733.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77448664 77465758 - MGP_BALBcJ_P0041733 Cbx7 protein_coding protein_coding MGP_BALBcJ_T0041734.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77448667 77465887 - Cbx7 protein_coding retained_intron MGP_BALBcJ_T0041735.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77451062 77467003 - MGP_BALBcJ_P0041735 Cbx7 protein_coding protein_coding MGP_BALBcJ_T0041736.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77451332 77507646 - MGP_BALBcJ_P0041736 Cbx7 protein_coding protein_coding MGP_BALBcJ_T0041737.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77451835 77465635 - MGP_BALBcJ_P0041737 Cbx7 protein_coding protein_coding MGP_BALBcJ_T0041738.1 MGP_BALBcJ_G0022057.1 mouse_genomes_project 15 77463718 77466934 - Cbx7 protein_coding retained_intron MGP_BALBcJ_T0041354.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73662758 73666831 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0041355.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73662758 73666832 - MGP_BALBcJ_P0041355 Sharpin protein_coding protein_coding MGP_BALBcJ_T0041356.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73662759 73666768 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0041357.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73662759 73666796 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0041358.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73662772 73663405 - MGP_BALBcJ_P0041358 Sharpin protein_coding protein_coding MGP_BALBcJ_T0041359.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73662836 73663916 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0041360.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73663349 73666471 - MGP_BALBcJ_P0041360 Sharpin protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041361.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73663569 73666412 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0041362.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73663617 73666403 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0041363.1 MGP_BALBcJ_G0021953.1 mouse_genomes_project 15 73664332 73666433 - Sharpin protein_coding retained_intron MGP_BALBcJ_T0013072.1 MGP_BALBcJ_G0011169.1 mouse_genomes_project 15 88715873 88716715 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041105.1 MGP_BALBcJ_G0021882.1 mouse_genomes_project 15 69629010 69662025 - MGP_BALBcJ_P0041105 Kcnk9 protein_coding protein_coding MGP_BALBcJ_T0102251.1 MGP_BALBcJ_G0040067.1 mouse_genomes_project 15 72190037 72190251 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100749.1 MGP_BALBcJ_G0038785.1 mouse_genomes_project 15 41401776 41401902 + Gm24903 snoRNA snoRNA MGP_BALBcJ_T0042819.1 MGP_BALBcJ_G0022405.1 mouse_genomes_project 15 101442670 101468576 - MGP_BALBcJ_P0042819 Zfp385a protein_coding protein_coding MGP_BALBcJ_T0041755.1 MGP_BALBcJ_G0022065.1 mouse_genomes_project 15 77799802 77803475 - MGP_BALBcJ_P0041755 Rps19bp1 protein_coding protein_coding MGP_BALBcJ_T0040639.1 MGP_BALBcJ_G0021712.1 mouse_genomes_project 15 18175147 18664201 + MGP_BALBcJ_P0040639 Cdh12 protein_coding protein_coding MGP_BALBcJ_T0042007.1 MGP_BALBcJ_G0022141.1 mouse_genomes_project 15 82004668 82089984 + MGP_BALBcJ_P0042007 Parvb protein_coding protein_coding MGP_BALBcJ_T0042008.1 MGP_BALBcJ_G0022141.1 mouse_genomes_project 15 82004691 82044553 + MGP_BALBcJ_P0042008 Parvb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042009.1 MGP_BALBcJ_G0022141.1 mouse_genomes_project 15 82029789 82063797 + Parvb protein_coding processed_transcript MGP_BALBcJ_T0041519.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75205837 75287289 - MGP_BALBcJ_P0041519 Myh9 protein_coding protein_coding MGP_BALBcJ_T0041520.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75210578 75212441 - Myh9 protein_coding retained_intron MGP_BALBcJ_T0041521.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75233433 75287170 - Myh9 protein_coding retained_intron MGP_BALBcJ_T0041522.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75235462 75287219 - Myh9 protein_coding retained_intron MGP_BALBcJ_T0041523.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75235978 75287161 - MGP_BALBcJ_P0041523 Myh9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041524.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75239889 75258475 - Myh9 protein_coding processed_transcript MGP_BALBcJ_T0041525.1 MGP_BALBcJ_G0021999.1 mouse_genomes_project 15 75250787 75287219 - Myh9 protein_coding retained_intron MGP_BALBcJ_T0041219.1 MGP_BALBcJ_G0021919.1 mouse_genomes_project 15 72659184 72729110 + MGP_BALBcJ_P0041219 Ly6l protein_coding protein_coding MGP_BALBcJ_T0100759.1 MGP_BALBcJ_G0038795.1 mouse_genomes_project 15 59922155 59922289 + Gm22521 snoRNA snoRNA MGP_BALBcJ_T0099472.1 MGP_BALBcJ_G0037508.1 mouse_genomes_project 15 61249157 61249262 + Gm25628 snRNA snRNA MGP_BALBcJ_T0040718.1 MGP_BALBcJ_G0021744.1 mouse_genomes_project 15 31367126 31507844 + MGP_BALBcJ_P0040718 Matn2 protein_coding protein_coding MGP_BALBcJ_T0040719.1 MGP_BALBcJ_G0021744.1 mouse_genomes_project 15 31367127 31507848 + MGP_BALBcJ_P0040719 Matn2 protein_coding protein_coding MGP_BALBcJ_T0041581.1 MGP_BALBcJ_G0022020.1 mouse_genomes_project 15 76322468 76330716 + MGP_BALBcJ_P0041581 Cdc42ep1 protein_coding protein_coding MGP_BALBcJ_T0013028.1 MGP_BALBcJ_G0011125.1 mouse_genomes_project 15 5780273 5792275 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006795.1 MGP_BALBcJ_G0005597.1 mouse_genomes_project 15 101070434 101074103 - Hotair lincRNA lincRNA MGP_BALBcJ_T0010024.1 MGP_BALBcJ_G0008149.1 mouse_genomes_project 15 37199358 37199429 - Gm25958 miRNA miRNA MGP_BALBcJ_T0040738.1 MGP_BALBcJ_G0021750.1 mouse_genomes_project 15 31649157 31756099 - MGP_BALBcJ_P0040738 Nipal2 protein_coding protein_coding MGP_BALBcJ_T0040439.1 MGP_BALBcJ_G0021655.1 mouse_genomes_project 15 1736450 1805131 + MGP_BALBcJ_P0040439 Mroh2b protein_coding protein_coding MGP_BALBcJ_T0013070.1 MGP_BALBcJ_G0011167.1 mouse_genomes_project 15 83300135 83300543 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040763.1 MGP_BALBcJ_G0021763.1 mouse_genomes_project 15 33601466 33652818 - MGP_BALBcJ_P0040763 Snx31 protein_coding protein_coding MGP_BALBcJ_T0040764.1 MGP_BALBcJ_G0021763.1 mouse_genomes_project 15 33601816 33652813 - MGP_BALBcJ_P0040764 Snx31 protein_coding protein_coding MGP_BALBcJ_T0040765.1 MGP_BALBcJ_G0021763.1 mouse_genomes_project 15 33633884 33641989 - Snx31 protein_coding processed_transcript MGP_BALBcJ_T0040766.1 MGP_BALBcJ_G0021763.1 mouse_genomes_project 15 33633884 33642447 - MGP_BALBcJ_P0040766 Snx31 protein_coding protein_coding MGP_BALBcJ_T0042308.1 MGP_BALBcJ_G0022231.1 mouse_genomes_project 15 93729964 93915446 + MGP_BALBcJ_P0042308 Ano6 protein_coding protein_coding MGP_BALBcJ_T0042309.1 MGP_BALBcJ_G0022231.1 mouse_genomes_project 15 93730105 93915459 + MGP_BALBcJ_P0042309 Ano6 protein_coding unknown_likely_coding MGP_BALBcJ_T0006740.1 MGP_BALBcJ_G0005564.1 mouse_genomes_project 15 40486189 40530357 - Gm10373 lincRNA lincRNA MGP_BALBcJ_T0013054.1 MGP_BALBcJ_G0011151.1 mouse_genomes_project 15 66046878 66047151 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041904.1 MGP_BALBcJ_G0022103.1 mouse_genomes_project 15 79839205 79842135 - MGP_BALBcJ_P0041904 Tnfrsf13c protein_coding protein_coding MGP_BALBcJ_T0041905.1 MGP_BALBcJ_G0022103.1 mouse_genomes_project 15 79839206 79842138 - MGP_BALBcJ_P0041905 Tnfrsf13c protein_coding protein_coding MGP_BALBcJ_T0098521.1 MGP_BALBcJ_G0036575.1 mouse_genomes_project 15 89405323 89405436 - Gm24647 rRNA rRNA MGP_BALBcJ_T0042657.1 MGP_BALBcJ_G0022348.1 mouse_genomes_project 15 99783744 99793602 - MGP_BALBcJ_P0042657 Krt6a protein_coding protein_coding MGP_BALBcJ_T0040727.1 MGP_BALBcJ_G0021747.1 mouse_genomes_project 15 31525057 31546298 + MGP_BALBcJ_P0040727 Erich5 protein_coding protein_coding MGP_BALBcJ_T0003625.1 MGP_BALBcJ_G0003283.1 mouse_genomes_project 15 101229530 101232363 + Gm10830 antisense antisense MGP_BALBcJ_T0010036.1 MGP_BALBcJ_G0008161.1 mouse_genomes_project 15 73604670 73604760 - Mir3079 miRNA miRNA MGP_BALBcJ_T0041166.1 MGP_BALBcJ_G0021900.1 mouse_genomes_project 15 71865148 71867231 - MGP_BALBcJ_P0041166 Lypd2 protein_coding protein_coding MGP_BALBcJ_T0041167.1 MGP_BALBcJ_G0021900.1 mouse_genomes_project 15 71865702 71867219 - Lypd2 protein_coding retained_intron MGP_BALBcJ_T0042462.1 MGP_BALBcJ_G0022285.1 mouse_genomes_project 15 97068058 97076361 + MGP_BALBcJ_P0042462 Troap protein_coding protein_coding MGP_BALBcJ_T0041567.1 MGP_BALBcJ_G0022013.1 mouse_genomes_project 15 75995412 76001693 - C1qtnf6 protein_coding processed_transcript MGP_BALBcJ_T0041568.1 MGP_BALBcJ_G0022013.1 mouse_genomes_project 15 75995412 76001693 - MGP_BALBcJ_P0041568 C1qtnf6 protein_coding protein_coding MGP_BALBcJ_T0041569.1 MGP_BALBcJ_G0022013.1 mouse_genomes_project 15 75997189 75999394 - C1qtnf6 protein_coding processed_transcript MGP_BALBcJ_T0017407.1 MGP_BALBcJ_G0015230.1 mouse_genomes_project 15 30277678 30278660 + processed_transcript processed_transcript MGP_BALBcJ_T0098519.1 MGP_BALBcJ_G0036573.1 mouse_genomes_project 15 79967807 79967926 + n-R5s41 rRNA rRNA MGP_BALBcJ_T0099475.1 MGP_BALBcJ_G0037511.1 mouse_genomes_project 15 69373650 69373757 - Gm23217 snRNA snRNA MGP_BALBcJ_T0013033.1 MGP_BALBcJ_G0011130.1 mouse_genomes_project 15 22769461 22769789 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010010.1 MGP_BALBcJ_G0008135.1 mouse_genomes_project 15 14612062 14612180 - Gm22032 miRNA miRNA MGP_BALBcJ_T0040963.1 MGP_BALBcJ_G0021834.1 mouse_genomes_project 15 55185579 55215021 - MGP_BALBcJ_P0040963 Zhx1 protein_coding protein_coding MGP_BALBcJ_T0040964.1 MGP_BALBcJ_G0021834.1 mouse_genomes_project 15 55185579 55215265 - MGP_BALBcJ_P0040964 Zhx1 protein_coding protein_coding MGP_BALBcJ_T0040965.1 MGP_BALBcJ_G0021834.1 mouse_genomes_project 15 55185881 55215245 - MGP_BALBcJ_P0040965 Zhx1 protein_coding protein_coding MGP_BALBcJ_T0040968.1 MGP_BALBcJ_G0021834.1 mouse_genomes_project 15 55191556 55214990 - MGP_BALBcJ_P0040968 Zhx1 protein_coding protein_coding MGP_BALBcJ_T0040969.1 MGP_BALBcJ_G0021834.1 mouse_genomes_project 15 55193490 55215139 - Zhx1 protein_coding retained_intron MGP_BALBcJ_T0040970.1 MGP_BALBcJ_G0021834.1 mouse_genomes_project 15 55207381 55215317 - Zhx1 protein_coding retained_intron MGP_BALBcJ_T0099460.1 MGP_BALBcJ_G0037496.1 mouse_genomes_project 15 41981641 41981734 + Gm24768 snRNA snRNA MGP_BALBcJ_T0042003.1 MGP_BALBcJ_G0022137.1 mouse_genomes_project 15 81850142 81879598 - MGP_BALBcJ_P0042003 Sult4a1 protein_coding protein_coding MGP_BALBcJ_T0042547.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98238003 98278217 + MGP_BALBcJ_P0042547 protein_coding protein_coding MGP_BALBcJ_T0042548.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98238660 98243222 + MGP_BALBcJ_P0042548 protein_coding protein_coding MGP_BALBcJ_T0042549.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98238663 98271639 + MGP_BALBcJ_P0042549 protein_coding unknown_likely_coding MGP_BALBcJ_T0042550.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98242566 98263093 + MGP_BALBcJ_P0042550 protein_coding protein_coding MGP_BALBcJ_T0042551.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98242578 98243421 + protein_coding retained_intron MGP_BALBcJ_T0042552.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98242605 98265584 + MGP_BALBcJ_P0042552 protein_coding protein_coding MGP_BALBcJ_T0042553.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98243140 98277029 + MGP_BALBcJ_P0042553 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042554.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98243158 98277072 + protein_coding processed_transcript MGP_BALBcJ_T0042555.1 MGP_BALBcJ_G0022312.1 mouse_genomes_project 15 98265414 98276861 + MGP_BALBcJ_P0042555 protein_coding protein_coding MGP_BALBcJ_T0042806.1 MGP_BALBcJ_G0022401.1 mouse_genomes_project 15 101369188 101371099 + MGP_BALBcJ_P0042806 Hnrnpa1 protein_coding unknown_likely_coding MGP_BALBcJ_T0042673.1 MGP_BALBcJ_G0022363.1 mouse_genomes_project 15 100176313 100200014 + MGP_BALBcJ_P0042673 Eif4b protein_coding protein_coding MGP_BALBcJ_T0042425.1 MGP_BALBcJ_G0022270.1 mouse_genomes_project 15 96625794 96644031 - MGP_BALBcJ_P0042425 Ddx23 protein_coding protein_coding MGP_BALBcJ_T0042426.1 MGP_BALBcJ_G0022270.1 mouse_genomes_project 15 96628638 96644026 - Ddx23 protein_coding retained_intron MGP_BALBcJ_T0042427.1 MGP_BALBcJ_G0022270.1 mouse_genomes_project 15 96628650 96644023 - Ddx23 protein_coding retained_intron MGP_BALBcJ_T0042428.1 MGP_BALBcJ_G0022270.1 mouse_genomes_project 15 96632677 96644026 - Ddx23 protein_coding retained_intron MGP_BALBcJ_T0042429.1 MGP_BALBcJ_G0022270.1 mouse_genomes_project 15 96637137 96644000 - MGP_BALBcJ_P0042429 Ddx23 protein_coding protein_coding MGP_BALBcJ_T0042430.1 MGP_BALBcJ_G0022270.1 mouse_genomes_project 15 96638351 96644031 - Ddx23 protein_coding retained_intron MGP_BALBcJ_T0041186.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108623 72113677 + MGP_BALBcJ_P0041186 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041187.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108623 72113675 + MGP_BALBcJ_P0041187 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041188.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108643 72113677 + MGP_BALBcJ_P0041188 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041189.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108677 72112548 + MGP_BALBcJ_P0041189 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041190.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108713 72112161 + MGP_BALBcJ_P0041190 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041191.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108735 72112528 + MGP_BALBcJ_P0041191 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041192.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108749 72112427 + MGP_BALBcJ_P0041192 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041193.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108757 72112499 + MGP_BALBcJ_P0041193 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041194.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108812 72112365 + MGP_BALBcJ_P0041194 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041195.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72108831 72112432 + MGP_BALBcJ_P0041195 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041196.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72109224 72113103 + MGP_BALBcJ_P0041196 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041197.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72109237 72112801 + Ly6e protein_coding retained_intron MGP_BALBcJ_T0041198.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72109239 72113103 + Ly6e protein_coding retained_intron MGP_BALBcJ_T0041199.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72109243 72112382 + MGP_BALBcJ_P0041199 Ly6e protein_coding protein_coding MGP_BALBcJ_T0041200.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72109254 72110069 + Ly6e protein_coding retained_intron MGP_BALBcJ_T0041201.1 MGP_BALBcJ_G0021911.1 mouse_genomes_project 15 72110131 72112598 + MGP_BALBcJ_P0041201 Ly6e protein_coding protein_coding MGP_BALBcJ_T0010066.1 MGP_BALBcJ_G0008191.1 mouse_genomes_project 15 87011219 87011292 - Mir6958 miRNA miRNA MGP_BALBcJ_T0040926.1 MGP_BALBcJ_G0021823.1 mouse_genomes_project 15 52684962 52708732 - MGP_BALBcJ_P0040926 Mrpl13 protein_coding protein_coding MGP_BALBcJ_T0040927.1 MGP_BALBcJ_G0021823.1 mouse_genomes_project 15 52684962 52708333 - MGP_BALBcJ_P0040927 Mrpl13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040928.1 MGP_BALBcJ_G0021823.1 mouse_genomes_project 15 52689504 52699033 - MGP_BALBcJ_P0040928 Mrpl13 protein_coding protein_coding MGP_BALBcJ_T0040929.1 MGP_BALBcJ_G0021823.1 mouse_genomes_project 15 52693739 52708267 - Mrpl13 protein_coding retained_intron MGP_BALBcJ_T0040930.1 MGP_BALBcJ_G0021823.1 mouse_genomes_project 15 52700316 52708259 - Mrpl13 protein_coding retained_intron MGP_BALBcJ_T0041895.1 MGP_BALBcJ_G0022098.1 mouse_genomes_project 15 79670488 79677866 + MGP_BALBcJ_P0041895 4930407I10Rik protein_coding protein_coding MGP_BALBcJ_T0040608.1 MGP_BALBcJ_G0021703.1 mouse_genomes_project 15 9160339 9160801 - MGP_BALBcJ_P0040608 1810049J17Rik protein_coding protein_coding MGP_BALBcJ_T0042572.1 MGP_BALBcJ_G0022320.1 mouse_genomes_project 15 98548652 98604887 - MGP_BALBcJ_P0042572 Tfcp2 protein_coding protein_coding MGP_BALBcJ_T0040677.1 MGP_BALBcJ_G0021728.1 mouse_genomes_project 15 27241741 28081786 + MGP_BALBcJ_P0040677 Ctnnd2 protein_coding protein_coding MGP_BALBcJ_T0041666.1 MGP_BALBcJ_G0022040.1 mouse_genomes_project 15 76871868 76890472 - MGP_BALBcJ_P0041666 Tmem184b protein_coding unknown_likely_coding MGP_BALBcJ_T0041667.1 MGP_BALBcJ_G0022040.1 mouse_genomes_project 15 76871873 76916169 - MGP_BALBcJ_P0041667 Tmem184b protein_coding protein_coding MGP_BALBcJ_T0041668.1 MGP_BALBcJ_G0022040.1 mouse_genomes_project 15 76871873 76915785 - MGP_BALBcJ_P0041668 Tmem184b protein_coding protein_coding MGP_BALBcJ_T0000940.1 MGP_BALBcJ_G0000871.1 mouse_genomes_project 15 101185590 101186617 - TEC TEC MGP_BALBcJ_T0040989.1 MGP_BALBcJ_G0021849.1 mouse_genomes_project 15 56471029 56484910 + Sqle protein_coding retained_intron MGP_BALBcJ_T0040990.1 MGP_BALBcJ_G0021849.1 mouse_genomes_project 15 56471033 56487143 + MGP_BALBcJ_P0040990 Sqle protein_coding protein_coding MGP_BALBcJ_T0040991.1 MGP_BALBcJ_G0021849.1 mouse_genomes_project 15 56471059 56487143 + MGP_BALBcJ_P0040991 Sqle protein_coding protein_coding MGP_BALBcJ_T0040992.1 MGP_BALBcJ_G0021849.1 mouse_genomes_project 15 56481493 56483151 + Sqle protein_coding retained_intron MGP_BALBcJ_T0040809.1 MGP_BALBcJ_G0021772.1 mouse_genomes_project 15 35093009 35203735 - MGP_BALBcJ_P0040809 Ubr5 protein_coding unknown_likely_coding MGP_BALBcJ_T0040810.1 MGP_BALBcJ_G0021772.1 mouse_genomes_project 15 35093011 35204163 - MGP_BALBcJ_P0040810 Ubr5 protein_coding protein_coding MGP_BALBcJ_T0041617.1 MGP_BALBcJ_G0022030.1 mouse_genomes_project 15 76563068 76582529 + MGP_BALBcJ_P0041617 Eif3l protein_coding protein_coding MGP_BALBcJ_T0040721.1 MGP_BALBcJ_G0021746.1 mouse_genomes_project 15 31512072 31514480 - Rpl30 protein_coding processed_transcript MGP_BALBcJ_T0040722.1 MGP_BALBcJ_G0021746.1 mouse_genomes_project 15 31512072 31514732 - Rpl30 protein_coding retained_intron MGP_BALBcJ_T0040723.1 MGP_BALBcJ_G0021746.1 mouse_genomes_project 15 31512072 31515212 - MGP_BALBcJ_P0040723 Rpl30 protein_coding protein_coding MGP_BALBcJ_T0040724.1 MGP_BALBcJ_G0021746.1 mouse_genomes_project 15 31512077 31514794 - MGP_BALBcJ_P0040724 Rpl30 protein_coding protein_coding MGP_BALBcJ_T0040725.1 MGP_BALBcJ_G0021746.1 mouse_genomes_project 15 31512142 31513233 - Rpl30 protein_coding retained_intron MGP_BALBcJ_T0040726.1 MGP_BALBcJ_G0021746.1 mouse_genomes_project 15 31514092 31514831 - Rpl30 protein_coding processed_transcript MGP_BALBcJ_T0042067.1 MGP_BALBcJ_G0022163.1 mouse_genomes_project 15 83658804 83675616 + MGP_BALBcJ_P0042067 Gtse1 protein_coding protein_coding MGP_BALBcJ_T0010022.1 MGP_BALBcJ_G0008147.1 mouse_genomes_project 15 35616184 35616259 - Mir6951 miRNA miRNA MGP_BALBcJ_T0040603.1 MGP_BALBcJ_G0021702.1 mouse_genomes_project 15 9042849 9109384 + MGP_BALBcJ_P0040603 Mtmr12 protein_coding protein_coding MGP_BALBcJ_T0040604.1 MGP_BALBcJ_G0021702.1 mouse_genomes_project 15 9042906 9109138 + MGP_BALBcJ_P0040604 Mtmr12 protein_coding protein_coding MGP_BALBcJ_T0040605.1 MGP_BALBcJ_G0021702.1 mouse_genomes_project 15 9042925 9109263 + MGP_BALBcJ_P0040605 Mtmr12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040606.1 MGP_BALBcJ_G0021702.1 mouse_genomes_project 15 9042939 9109381 + MGP_BALBcJ_P0040606 Mtmr12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040607.1 MGP_BALBcJ_G0021702.1 mouse_genomes_project 15 9061164 9083448 + Mtmr12 protein_coding processed_transcript MGP_BALBcJ_T0041293.1 MGP_BALBcJ_G0021941.1 mouse_genomes_project 15 73372901 73383664 - MGP_BALBcJ_P0041293 Puf60 protein_coding protein_coding MGP_BALBcJ_T0041294.1 MGP_BALBcJ_G0021941.1 mouse_genomes_project 15 73372901 73383664 - MGP_BALBcJ_P0041294 Puf60 protein_coding protein_coding MGP_BALBcJ_T0042153.1 MGP_BALBcJ_G0022188.1 mouse_genomes_project 15 87037986 87114216 + MGP_BALBcJ_P0042153 Ppp6r2 protein_coding unknown_likely_coding MGP_BALBcJ_T0042154.1 MGP_BALBcJ_G0022188.1 mouse_genomes_project 15 87070319 87117244 + MGP_BALBcJ_P0042154 Ppp6r2 protein_coding unknown_likely_coding MGP_BALBcJ_T0042155.1 MGP_BALBcJ_G0022188.1 mouse_genomes_project 15 87080335 87117359 + MGP_BALBcJ_P0042155 Ppp6r2 protein_coding protein_coding MGP_BALBcJ_T0099486.1 MGP_BALBcJ_G0037522.1 mouse_genomes_project 15 79181329 79181436 + Gm22067 snRNA snRNA MGP_BALBcJ_T0006733.1 MGP_BALBcJ_G0005557.1 mouse_genomes_project 15 35370886 35372679 - Gm8705 lincRNA lincRNA MGP_BALBcJ_T0041488.1 MGP_BALBcJ_G0021986.1 mouse_genomes_project 15 74322425 74329721 - MGP_BALBcJ_P0041488 Mb protein_coding protein_coding MGP_BALBcJ_T0041489.1 MGP_BALBcJ_G0021986.1 mouse_genomes_project 15 74322425 74358497 - MGP_BALBcJ_P0041489 Mb protein_coding protein_coding MGP_BALBcJ_T0041490.1 MGP_BALBcJ_G0021986.1 mouse_genomes_project 15 74322425 74329661 - MGP_BALBcJ_P0041490 Mb protein_coding protein_coding MGP_BALBcJ_T0010035.1 MGP_BALBcJ_G0008160.1 mouse_genomes_project 15 73562132 73562200 + Mir6953 miRNA miRNA MGP_BALBcJ_T0013045.1 MGP_BALBcJ_G0011142.1 mouse_genomes_project 15 44779534 44783096 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041398.1 MGP_BALBcJ_G0021959.1 mouse_genomes_project 15 73769700 73794356 - MGP_BALBcJ_P0041398 Bop1 protein_coding protein_coding MGP_BALBcJ_T0042320.1 MGP_BALBcJ_G0022236.1 mouse_genomes_project 15 94640689 94652985 - MGP_BALBcJ_P0042320 Slc38a2 protein_coding protein_coding MGP_BALBcJ_T0010061.1 MGP_BALBcJ_G0008186.1 mouse_genomes_project 15 83497675 83497770 + Mirlet7c-2 miRNA miRNA MGP_BALBcJ_T0042666.1 MGP_BALBcJ_G0022356.1 mouse_genomes_project 15 99959560 99971014 - MGP_BALBcJ_P0042666 Krt77 protein_coding protein_coding MGP_BALBcJ_T0013023.1 MGP_BALBcJ_G0011120.1 mouse_genomes_project 15 603910 604894 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041618.1 MGP_BALBcJ_G0022031.1 mouse_genomes_project 15 76596493 76624371 + MGP_BALBcJ_P0041618 Micall1 protein_coding protein_coding MGP_BALBcJ_T0042467.1 MGP_BALBcJ_G0022289.1 mouse_genomes_project 15 97219048 97236601 + MGP_BALBcJ_P0042467 Kcnh3 protein_coding protein_coding MGP_BALBcJ_T0099449.1 MGP_BALBcJ_G0037485.1 mouse_genomes_project 15 5042993 5043104 + Gm24144 snRNA snRNA MGP_BALBcJ_T0040580.1 MGP_BALBcJ_G0021692.1 mouse_genomes_project 15 7421522 7568211 - MGP_BALBcJ_P0040580 Rai14 protein_coding protein_coding MGP_BALBcJ_T0040581.1 MGP_BALBcJ_G0021692.1 mouse_genomes_project 15 7421522 7569302 - MGP_BALBcJ_P0040581 Rai14 protein_coding protein_coding MGP_BALBcJ_T0041123.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70709770 70737766 - MGP_BALBcJ_P0041123 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041124.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70709780 70756898 - MGP_BALBcJ_P0041124 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041125.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70712646 70737752 - MGP_BALBcJ_P0041125 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041126.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70712646 70749609 - MGP_BALBcJ_P0041126 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041127.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70712649 70756898 - MGP_BALBcJ_P0041127 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041128.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70719250 70721319 - MGP_BALBcJ_P0041128 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041129.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70737877 70778667 - MGP_BALBcJ_P0041129 Slc45a4 protein_coding protein_coding MGP_BALBcJ_T0041130.1 MGP_BALBcJ_G0021888.1 mouse_genomes_project 15 70738232 70778225 - Slc45a4 protein_coding processed_transcript MGP_BALBcJ_T0042788.1 MGP_BALBcJ_G0022392.1 mouse_genomes_project 15 101080747 101084029 + MGP_BALBcJ_P0042788 Hoxc11 protein_coding protein_coding MGP_BALBcJ_T0040760.1 MGP_BALBcJ_G0021760.1 mouse_genomes_project 15 33329964 33373354 - MGP_BALBcJ_P0040760 Rnf19a protein_coding protein_coding MGP_BALBcJ_T0041282.1 MGP_BALBcJ_G0021939.1 mouse_genomes_project 15 73312439 73338025 + MGP_BALBcJ_P0041282 protein_coding protein_coding MGP_BALBcJ_T0041283.1 MGP_BALBcJ_G0021939.1 mouse_genomes_project 15 73317149 73337504 + MGP_BALBcJ_P0041283 protein_coding protein_coding MGP_BALBcJ_T0041284.1 MGP_BALBcJ_G0021939.1 mouse_genomes_project 15 73337037 73340630 + protein_coding processed_transcript MGP_BALBcJ_T0041285.1 MGP_BALBcJ_G0021939.1 mouse_genomes_project 15 73337736 73348896 + protein_coding processed_transcript MGP_BALBcJ_T0041286.1 MGP_BALBcJ_G0021939.1 mouse_genomes_project 15 73339431 73340691 + protein_coding retained_intron MGP_BALBcJ_T0041210.1 MGP_BALBcJ_G0021918.1 mouse_genomes_project 15 72472425 72476163 + MGP_BALBcJ_P0041210 Ly6f protein_coding protein_coding MGP_BALBcJ_T0041218.1 MGP_BALBcJ_G0021918.1 mouse_genomes_project 15 72472596 72476164 + MGP_BALBcJ_P0041218 Ly6f protein_coding protein_coding MGP_BALBcJ_T0102254.1 MGP_BALBcJ_G0040070.1 mouse_genomes_project 15 72448487 72450657 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042214.1 MGP_BALBcJ_G0022203.1 mouse_genomes_project 15 87307951 87312901 - MGP_BALBcJ_P0042214 Arsa protein_coding protein_coding MGP_BALBcJ_T0042215.1 MGP_BALBcJ_G0022203.1 mouse_genomes_project 15 87308003 87311589 - Arsa protein_coding retained_intron MGP_BALBcJ_T0042216.1 MGP_BALBcJ_G0022203.1 mouse_genomes_project 15 87308715 87309747 - MGP_BALBcJ_P0042216 Arsa protein_coding protein_coding MGP_BALBcJ_T0042217.1 MGP_BALBcJ_G0022203.1 mouse_genomes_project 15 87311706 87312887 - Arsa protein_coding processed_transcript MGP_BALBcJ_T0040833.1 MGP_BALBcJ_G0021783.1 mouse_genomes_project 15 36757777 36773215 + MGP_BALBcJ_P0040833 Dcstamp protein_coding protein_coding MGP_BALBcJ_T0010030.1 MGP_BALBcJ_G0008155.1 mouse_genomes_project 15 65503130 65503212 - Mir30d miRNA miRNA MGP_BALBcJ_T0003616.1 MGP_BALBcJ_G0003276.1 mouse_genomes_project 15 97822474 97838038 + Gm17057 antisense antisense MGP_BALBcJ_T0040676.1 MGP_BALBcJ_G0021727.1 mouse_genomes_project 15 25270218 25531899 + MGP_BALBcJ_P0040676 Dnah5 protein_coding protein_coding MGP_BALBcJ_T0042051.1 MGP_BALBcJ_G0022159.1 mouse_genomes_project 15 83527880 83570309 + Ppara protein_coding processed_transcript MGP_BALBcJ_T0042052.1 MGP_BALBcJ_G0022159.1 mouse_genomes_project 15 83528461 83596103 + MGP_BALBcJ_P0042052 Ppara protein_coding protein_coding MGP_BALBcJ_T0042053.1 MGP_BALBcJ_G0022159.1 mouse_genomes_project 15 83528536 83570404 + Ppara protein_coding processed_transcript MGP_BALBcJ_T0042054.1 MGP_BALBcJ_G0022159.1 mouse_genomes_project 15 83528673 83596759 + MGP_BALBcJ_P0042054 Ppara protein_coding protein_coding MGP_BALBcJ_T0042055.1 MGP_BALBcJ_G0022159.1 mouse_genomes_project 15 83529028 83595688 + MGP_BALBcJ_P0042055 Ppara protein_coding protein_coding MGP_BALBcJ_T0042056.1 MGP_BALBcJ_G0022159.1 mouse_genomes_project 15 83564864 83570444 + Ppara protein_coding processed_transcript MGP_BALBcJ_T0013027.1 MGP_BALBcJ_G0011124.1 mouse_genomes_project 15 5776959 5777779 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040412.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 175798 444355 - MGP_BALBcJ_P0040412 Ghr protein_coding protein_coding MGP_BALBcJ_T0040413.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 177047 442967 - MGP_BALBcJ_P0040413 Ghr protein_coding protein_coding MGP_BALBcJ_T0040414.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 185562 444313 - MGP_BALBcJ_P0040414 Ghr protein_coding protein_coding MGP_BALBcJ_T0040415.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 185576 330184 - MGP_BALBcJ_P0040415 Ghr protein_coding protein_coding MGP_BALBcJ_T0040416.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 191476 443721 - MGP_BALBcJ_P0040416 Ghr protein_coding protein_coding MGP_BALBcJ_T0040417.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 198495 444313 - Ghr protein_coding processed_transcript MGP_BALBcJ_T0040418.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 202853 444337 - Ghr protein_coding retained_intron MGP_BALBcJ_T0040419.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 204135 444336 - Ghr protein_coding processed_transcript MGP_BALBcJ_T0040420.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 241313 444617 - Ghr protein_coding retained_intron MGP_BALBcJ_T0040421.1 MGP_BALBcJ_G0021649.1 mouse_genomes_project 15 405879 444312 - Ghr protein_coding processed_transcript MGP_BALBcJ_T0003611.1 MGP_BALBcJ_G0003271.1 mouse_genomes_project 15 96543911 96546260 + 9330020H09Rik antisense antisense MGP_BALBcJ_T0041113.1 MGP_BALBcJ_G0021885.1 mouse_genomes_project 15 70219618 70313098 - MGP_BALBcJ_P0041113 Ago2 protein_coding protein_coding MGP_BALBcJ_T0040705.1 MGP_BALBcJ_G0021740.1 mouse_genomes_project 15 30142535 30662464 + MGP_BALBcJ_P0040705 Cpq protein_coding protein_coding MGP_BALBcJ_T0003608.1 MGP_BALBcJ_G0003268.1 mouse_genomes_project 15 95724346 95730798 + Rapgef3os1 antisense antisense MGP_BALBcJ_T0040717.1 MGP_BALBcJ_G0021743.1 mouse_genomes_project 15 31295833 31342189 + MGP_BALBcJ_P0040717 Laptm4b protein_coding protein_coding MGP_BALBcJ_T0042439.1 MGP_BALBcJ_G0022275.1 mouse_genomes_project 15 96753185 96759582 - MGP_BALBcJ_P0042439 Wnt10b protein_coding protein_coding MGP_BALBcJ_T0042440.1 MGP_BALBcJ_G0022275.1 mouse_genomes_project 15 96753632 96758693 - MGP_BALBcJ_P0042440 Wnt10b protein_coding protein_coding MGP_BALBcJ_T0100772.1 MGP_BALBcJ_G0038808.1 mouse_genomes_project 15 96500881 96501018 - Snora2b snoRNA snoRNA MGP_BALBcJ_T0040621.1 MGP_BALBcJ_G0021706.1 mouse_genomes_project 15 9649886 9667249 - MGP_BALBcJ_P0040621 6030458C11Rik protein_coding protein_coding MGP_BALBcJ_T0099473.1 MGP_BALBcJ_G0037509.1 mouse_genomes_project 15 62902037 62902226 + Gm23907 snRNA snRNA MGP_BALBcJ_T0040767.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33692791 33705771 - MGP_BALBcJ_P0040767 Pabpc1 protein_coding protein_coding MGP_BALBcJ_T0040768.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33692953 33694976 - MGP_BALBcJ_P0040768 Pabpc1 protein_coding protein_coding MGP_BALBcJ_T0040769.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33692980 33695269 - Pabpc1 protein_coding processed_transcript MGP_BALBcJ_T0040770.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33692980 33694383 - Pabpc1 protein_coding processed_transcript MGP_BALBcJ_T0040771.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33693157 33694693 - Pabpc1 protein_coding processed_transcript MGP_BALBcJ_T0040772.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33695257 33699303 - Pabpc1 protein_coding processed_transcript MGP_BALBcJ_T0040773.1 MGP_BALBcJ_G0021764.1 mouse_genomes_project 15 33700452 33705771 - Pabpc1 protein_coding processed_transcript MGP_BALBcJ_T0042821.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537751 101556931 - MGP_BALBcJ_P0042821 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042822.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537804 101555067 - MGP_BALBcJ_P0042822 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042823.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537804 101554961 - MGP_BALBcJ_P0042823 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042824.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537807 101556023 - MGP_BALBcJ_P0042824 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042825.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537829 101556810 - MGP_BALBcJ_P0042825 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042826.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537841 101556805 - MGP_BALBcJ_P0042826 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042827.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101537860 101556840 - MGP_BALBcJ_P0042827 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042828.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101543969 101556870 - MGP_BALBcJ_P0042828 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0042829.1 MGP_BALBcJ_G0022407.1 mouse_genomes_project 15 101546454 101556705 - MGP_BALBcJ_P0042829 Gtsf1 protein_coding protein_coding MGP_BALBcJ_T0040940.1 MGP_BALBcJ_G0021826.1 mouse_genomes_project 15 53806845 53836274 - MGP_BALBcJ_P0040940 Has2 protein_coding protein_coding MGP_BALBcJ_T0040535.1 MGP_BALBcJ_G0021681.1 mouse_genomes_project 15 6159596 6186978 + protein_coding retained_intron MGP_BALBcJ_T0040919.1 MGP_BALBcJ_G0021821.1 mouse_genomes_project 15 52259370 52409009 + MGP_BALBcJ_P0040919 Deptor protein_coding protein_coding MGP_BALBcJ_T0040920.1 MGP_BALBcJ_G0021821.1 mouse_genomes_project 15 52259477 52367858 + MGP_BALBcJ_P0040920 Deptor protein_coding protein_coding MGP_BALBcJ_T0040921.1 MGP_BALBcJ_G0021821.1 mouse_genomes_project 15 52280491 52403936 + MGP_BALBcJ_P0040921 Deptor protein_coding protein_coding MGP_BALBcJ_T0042681.1 MGP_BALBcJ_G0022367.1 mouse_genomes_project 15 100253220 100266210 + MGP_BALBcJ_P0042681 Soat2 protein_coding protein_coding MGP_BALBcJ_T0042682.1 MGP_BALBcJ_G0022367.1 mouse_genomes_project 15 100253810 100265868 + MGP_BALBcJ_P0042682 Soat2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0098845.1 MGP_BALBcJ_G0036895.1 mouse_genomes_project 15 93004653 93071520 - 1700129L04Rik sense_intronic sense_intronic MGP_BALBcJ_T0098846.1 MGP_BALBcJ_G0036895.1 mouse_genomes_project 15 93004727 93057999 - 1700129L04Rik sense_intronic sense_intronic MGP_BALBcJ_T0041296.1 MGP_BALBcJ_G0021943.1 mouse_genomes_project 15 73420910 73427990 - MGP_BALBcJ_P0041296 BC024139 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041297.1 MGP_BALBcJ_G0021943.1 mouse_genomes_project 15 73420913 73427936 - MGP_BALBcJ_P0041297 BC024139 protein_coding protein_coding MGP_BALBcJ_T0041298.1 MGP_BALBcJ_G0021943.1 mouse_genomes_project 15 73420914 73427950 - MGP_BALBcJ_P0041298 BC024139 protein_coding protein_coding MGP_BALBcJ_T0041299.1 MGP_BALBcJ_G0021943.1 mouse_genomes_project 15 73424202 73427465 - BC024139 protein_coding processed_transcript MGP_BALBcJ_T0040853.1 MGP_BALBcJ_G0021792.1 mouse_genomes_project 15 40308061 40340756 - MGP_BALBcJ_P0040853 Eif3e protein_coding protein_coding MGP_BALBcJ_T0102255.1 MGP_BALBcJ_G0040071.1 mouse_genomes_project 15 72496082 72499693 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0040594.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 8954491 9024302 + MGP_BALBcJ_P0040594 Zfr protein_coding protein_coding MGP_BALBcJ_T0040595.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 8954511 8984231 + MGP_BALBcJ_P0040595 Zfr protein_coding protein_coding MGP_BALBcJ_T0040596.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 8954519 8976053 + MGP_BALBcJ_P0040596 Zfr protein_coding protein_coding MGP_BALBcJ_T0040597.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 8954526 8958948 + Zfr protein_coding processed_transcript MGP_BALBcJ_T0040598.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 8997866 9004619 + MGP_BALBcJ_P0040598 Zfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040599.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 8998787 9022612 + MGP_BALBcJ_P0040599 Zfr protein_coding protein_coding MGP_BALBcJ_T0040600.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 9004557 9023082 + MGP_BALBcJ_P0040600 Zfr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040601.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 9008674 9010185 + Zfr protein_coding retained_intron MGP_BALBcJ_T0040602.1 MGP_BALBcJ_G0021701.1 mouse_genomes_project 15 9018258 9023082 + Zfr protein_coding processed_transcript MGP_BALBcJ_T0040445.1 MGP_BALBcJ_G0021660.1 mouse_genomes_project 15 1983323 2023660 + MGP_BALBcJ_P0040445 Prkaa1 protein_coding protein_coding MGP_BALBcJ_T0040756.1 MGP_BALBcJ_G0021757.1 mouse_genomes_project 15 33237669 33252479 - MGP_BALBcJ_P0040756 Fbxo43 protein_coding protein_coding MGP_BALBcJ_T0042409.1 MGP_BALBcJ_G0022265.1 mouse_genomes_project 15 96492921 96509435 - MGP_BALBcJ_P0042409 Kansl2 protein_coding protein_coding MGP_BALBcJ_T0042410.1 MGP_BALBcJ_G0022265.1 mouse_genomes_project 15 96493201 96509412 - MGP_BALBcJ_P0042410 Kansl2 protein_coding protein_coding MGP_BALBcJ_T0041805.1 MGP_BALBcJ_G0022077.1 mouse_genomes_project 15 78940440 78976764 - MGP_BALBcJ_P0041805 St13 protein_coding protein_coding MGP_BALBcJ_T0041806.1 MGP_BALBcJ_G0022077.1 mouse_genomes_project 15 78942213 78976315 - MGP_BALBcJ_P0041806 St13 protein_coding protein_coding MGP_BALBcJ_T0041807.1 MGP_BALBcJ_G0022077.1 mouse_genomes_project 15 78954526 78976104 - MGP_BALBcJ_P0041807 St13 protein_coding protein_coding MGP_BALBcJ_T0041808.1 MGP_BALBcJ_G0022077.1 mouse_genomes_project 15 78966376 78976798 - MGP_BALBcJ_P0041808 St13 protein_coding protein_coding MGP_BALBcJ_T0041809.1 MGP_BALBcJ_G0022077.1 mouse_genomes_project 15 78968992 78976794 - MGP_BALBcJ_P0041809 St13 protein_coding protein_coding MGP_BALBcJ_T0041968.1 MGP_BALBcJ_G0022128.1 mouse_genomes_project 15 81137962 81198080 - MGP_BALBcJ_P0041968 Pacsin2 protein_coding protein_coding MGP_BALBcJ_T0041969.1 MGP_BALBcJ_G0022128.1 mouse_genomes_project 15 81137962 81230480 - MGP_BALBcJ_P0041969 Pacsin2 protein_coding protein_coding MGP_BALBcJ_T0041970.1 MGP_BALBcJ_G0022128.1 mouse_genomes_project 15 81138477 81230444 - MGP_BALBcJ_P0041970 Pacsin2 protein_coding protein_coding MGP_BALBcJ_T0000926.1 MGP_BALBcJ_G0000857.1 mouse_genomes_project 15 4491980 4492356 - TEC TEC MGP_BALBcJ_T0013057.1 MGP_BALBcJ_G0011154.1 mouse_genomes_project 15 71850002 71850146 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100761.1 MGP_BALBcJ_G0038797.1 mouse_genomes_project 15 66823795 66823924 - Gm23987 snoRNA snoRNA MGP_BALBcJ_T0040974.1 MGP_BALBcJ_G0021838.1 mouse_genomes_project 15 55454421 55464087 - MGP_BALBcJ_P0040974 Klhl38 protein_coding protein_coding MGP_BALBcJ_T0042049.1 MGP_BALBcJ_G0022158.1 mouse_genomes_project 15 83324932 83366938 - MGP_BALBcJ_P0042049 Wnt7b protein_coding protein_coding MGP_BALBcJ_T0042050.1 MGP_BALBcJ_G0022158.1 mouse_genomes_project 15 83324936 83371146 - MGP_BALBcJ_P0042050 Wnt7b protein_coding protein_coding MGP_BALBcJ_T0042390.1 MGP_BALBcJ_G0022256.1 mouse_genomes_project 15 96256622 96267157 - MGP_BALBcJ_P0042390 Zfp641 protein_coding protein_coding MGP_BALBcJ_T0042391.1 MGP_BALBcJ_G0022256.1 mouse_genomes_project 15 96257156 96267110 - MGP_BALBcJ_P0042391 Zfp641 protein_coding protein_coding MGP_BALBcJ_T0099468.1 MGP_BALBcJ_G0037504.1 mouse_genomes_project 15 54379766 54379856 - Gm26178 snRNA snRNA MGP_BALBcJ_T0040781.1 MGP_BALBcJ_G0021766.1 mouse_genomes_project 15 33972801 33982106 - MGP_BALBcJ_P0040781 Gm10384 protein_coding protein_coding MGP_BALBcJ_T0040993.1 MGP_BALBcJ_G0021850.1 mouse_genomes_project 15 56487948 56529699 - MGP_BALBcJ_P0040993 E430025E21Rik protein_coding protein_coding MGP_BALBcJ_T0041116.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70645090 70704599 + MGP_BALBcJ_P0041116 Dennd3 protein_coding protein_coding MGP_BALBcJ_T0041117.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70645202 70704456 + MGP_BALBcJ_P0041117 Dennd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041118.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70651123 70656055 + Dennd3 protein_coding processed_transcript MGP_BALBcJ_T0041119.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70654851 70703311 + MGP_BALBcJ_P0041119 Dennd3 protein_coding protein_coding MGP_BALBcJ_T0041120.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70690014 70700477 + MGP_BALBcJ_P0041120 Dennd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041121.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70697231 70699447 + Dennd3 protein_coding retained_intron MGP_BALBcJ_T0041122.1 MGP_BALBcJ_G0021887.1 mouse_genomes_project 15 70699447 70703256 + Dennd3 protein_coding retained_intron MGP_BALBcJ_T0010009.1 MGP_BALBcJ_G0008134.1 mouse_genomes_project 15 11602381 11602613 - Gm24080 miRNA miRNA MGP_BALBcJ_T0042147.1 MGP_BALBcJ_G0022186.1 mouse_genomes_project 15 86981249 87006436 - MGP_BALBcJ_P0042147 Plxnb2 protein_coding unknown_likely_coding MGP_BALBcJ_T0042148.1 MGP_BALBcJ_G0022186.1 mouse_genomes_project 15 86981253 86982284 - Plxnb2 protein_coding processed_transcript MGP_BALBcJ_T0042149.1 MGP_BALBcJ_G0022186.1 mouse_genomes_project 15 86981685 86982949 - Plxnb2 protein_coding processed_transcript MGP_BALBcJ_T0042150.1 MGP_BALBcJ_G0022186.1 mouse_genomes_project 15 86986763 86987300 - Plxnb2 protein_coding processed_transcript MGP_BALBcJ_T0042151.1 MGP_BALBcJ_G0022186.1 mouse_genomes_project 15 86990643 86991550 - Plxnb2 protein_coding processed_transcript MGP_BALBcJ_T0100736.1 MGP_BALBcJ_G0038772.1 mouse_genomes_project 15 26959462 26959596 - Gm23033 snoRNA snoRNA MGP_BALBcJ_T0041011.1 MGP_BALBcJ_G0021858.1 mouse_genomes_project 15 61022256 61043452 - MGP_BALBcJ_P0041011 protein_coding protein_coding MGP_BALBcJ_T0042010.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82099239 82102258 + Parvg protein_coding processed_transcript MGP_BALBcJ_T0042011.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82099933 82118110 + MGP_BALBcJ_P0042011 Parvg protein_coding protein_coding MGP_BALBcJ_T0042012.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82099947 82104098 + MGP_BALBcJ_P0042012 Parvg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042013.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82099975 82104084 + MGP_BALBcJ_P0042013 Parvg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042014.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82100008 82105303 + Parvg protein_coding processed_transcript MGP_BALBcJ_T0042015.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82101326 82104134 + MGP_BALBcJ_P0042015 Parvg protein_coding protein_coding MGP_BALBcJ_T0042016.1 MGP_BALBcJ_G0022142.1 mouse_genomes_project 15 82101326 82118146 + MGP_BALBcJ_P0042016 Parvg protein_coding protein_coding MGP_BALBcJ_T0006765.1 MGP_BALBcJ_G0005577.1 mouse_genomes_project 15 79402992 79404807 - Gm17597 lincRNA lincRNA MGP_BALBcJ_T0099045.1 MGP_BALBcJ_G0037085.1 mouse_genomes_project 15 86716059 86717790 - Gm20621 sense_overlapping sense_overlapping MGP_BALBcJ_T0099046.1 MGP_BALBcJ_G0037085.1 mouse_genomes_project 15 86716781 86717799 - Gm20621 sense_overlapping sense_overlapping MGP_BALBcJ_T0099047.1 MGP_BALBcJ_G0037085.1 mouse_genomes_project 15 86716786 86717757 - Gm20621 sense_overlapping sense_overlapping MGP_BALBcJ_T0010012.1 MGP_BALBcJ_G0008137.1 mouse_genomes_project 15 23038787 23038848 + Mir7212 miRNA miRNA MGP_BALBcJ_T0102263.1 MGP_BALBcJ_G0040079.1 mouse_genomes_project 15 96471573 96471811 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100732.1 MGP_BALBcJ_G0038768.1 mouse_genomes_project 15 17215585 17215715 + Gm25976 snoRNA snoRNA MGP_BALBcJ_T0041100.1 MGP_BALBcJ_G0021880.1 mouse_genomes_project 15 68573276 68840238 - MGP_BALBcJ_P0041100 Fam135b protein_coding protein_coding MGP_BALBcJ_T0011375.1 MGP_BALBcJ_G0009500.1 mouse_genomes_project 15 95901357 95901668 + Gm22202 misc_RNA misc_RNA MGP_BALBcJ_T0042786.1 MGP_BALBcJ_G0022390.1 mouse_genomes_project 15 101047144 101054856 + MGP_BALBcJ_P0042786 Hoxc13 protein_coding protein_coding MGP_BALBcJ_T0013049.1 MGP_BALBcJ_G0011146.1 mouse_genomes_project 15 57147241 57147691 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042431.1 MGP_BALBcJ_G0022271.1 mouse_genomes_project 15 96644562 96658361 - MGP_BALBcJ_P0042431 Rnd1 protein_coding protein_coding MGP_BALBcJ_T0042432.1 MGP_BALBcJ_G0022271.1 mouse_genomes_project 15 96650195 96658362 - MGP_BALBcJ_P0042432 Rnd1 protein_coding protein_coding MGP_BALBcJ_T0042433.1 MGP_BALBcJ_G0022271.1 mouse_genomes_project 15 96653146 96658359 - MGP_BALBcJ_P0042433 Rnd1 protein_coding protein_coding MGP_BALBcJ_T0040487.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4036237 4220001 - MGP_BALBcJ_P0040487 Egflam protein_coding protein_coding MGP_BALBcJ_T0040488.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4036695 4220048 - MGP_BALBcJ_P0040488 Egflam protein_coding protein_coding MGP_BALBcJ_T0040489.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4036700 4220092 - MGP_BALBcJ_P0040489 Egflam protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040490.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4042241 4052853 - Egflam protein_coding retained_intron MGP_BALBcJ_T0040491.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4062925 4219966 - Egflam protein_coding retained_intron MGP_BALBcJ_T0040492.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4082987 4084245 - Egflam protein_coding processed_transcript MGP_BALBcJ_T0040493.1 MGP_BALBcJ_G0021669.1 mouse_genomes_project 15 4128913 4219958 - Egflam protein_coding retained_intron MGP_BALBcJ_T0006793.1 MGP_BALBcJ_G0005595.1 mouse_genomes_project 15 100375196 100378755 + lincRNA lincRNA MGP_BALBcJ_T0042115.1 MGP_BALBcJ_G0022179.1 mouse_genomes_project 15 86879452 86890543 + MGP_BALBcJ_P0042115 Panx2 protein_coding protein_coding MGP_BALBcJ_T0042116.1 MGP_BALBcJ_G0022179.1 mouse_genomes_project 15 86879465 86891572 + MGP_BALBcJ_P0042116 Panx2 protein_coding protein_coding MGP_BALBcJ_T0042117.1 MGP_BALBcJ_G0022179.1 mouse_genomes_project 15 86890337 86894315 + MGP_BALBcJ_P0042117 Panx2 protein_coding protein_coding MGP_BALBcJ_T0042362.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95942504 95971568 - MGP_BALBcJ_P0042362 Col2a1 protein_coding protein_coding MGP_BALBcJ_T0042363.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95942504 95971530 - MGP_BALBcJ_P0042363 Col2a1 protein_coding protein_coding MGP_BALBcJ_T0042364.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95953211 95955824 - Col2a1 protein_coding retained_intron MGP_BALBcJ_T0042365.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95955013 95957355 - Col2a1 protein_coding processed_transcript MGP_BALBcJ_T0042366.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95961718 95966316 - Col2a1 protein_coding retained_intron MGP_BALBcJ_T0042367.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95961869 95966544 - Col2a1 protein_coding processed_transcript MGP_BALBcJ_T0042368.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95965221 95968738 - Col2a1 protein_coding processed_transcript MGP_BALBcJ_T0042369.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95965428 95971508 - MGP_BALBcJ_P0042369 Col2a1 protein_coding protein_coding MGP_BALBcJ_T0042370.1 MGP_BALBcJ_G0022248.1 mouse_genomes_project 15 95967093 95971530 - Col2a1 protein_coding retained_intron MGP_BALBcJ_T0100762.1 MGP_BALBcJ_G0038798.1 mouse_genomes_project 15 68907015 68907193 + Gm22519 snoRNA snoRNA MGP_BALBcJ_T0040557.1 MGP_BALBcJ_G0021686.1 mouse_genomes_project 15 7173056 7222370 + MGP_BALBcJ_P0040557 Gm21973 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042442.1 MGP_BALBcJ_G0022277.1 mouse_genomes_project 15 96785201 96791220 - MGP_BALBcJ_P0042442 Ddn protein_coding protein_coding MGP_BALBcJ_T0042667.1 MGP_BALBcJ_G0022357.1 mouse_genomes_project 15 99985679 99994226 - MGP_BALBcJ_P0042667 Krt76 protein_coding protein_coding MGP_BALBcJ_T0041669.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76931240 76956070 - MGP_BALBcJ_P0041669 Csnk1e protein_coding protein_coding MGP_BALBcJ_T0041670.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76932833 76935403 - Csnk1e protein_coding retained_intron MGP_BALBcJ_T0041671.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76933251 76956073 - MGP_BALBcJ_P0041671 Csnk1e protein_coding protein_coding MGP_BALBcJ_T0041672.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76936574 76955888 - MGP_BALBcJ_P0041672 Csnk1e protein_coding protein_coding MGP_BALBcJ_T0041673.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76937736 76938392 - Csnk1e protein_coding retained_intron MGP_BALBcJ_T0041674.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76938258 76939652 - Csnk1e protein_coding retained_intron MGP_BALBcJ_T0041675.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76938830 76940537 - Csnk1e protein_coding retained_intron MGP_BALBcJ_T0041676.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76938948 76943953 - Csnk1e protein_coding retained_intron MGP_BALBcJ_T0041677.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76940491 76953090 - MGP_BALBcJ_P0041677 Csnk1e protein_coding protein_coding MGP_BALBcJ_T0041678.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76940560 76955888 - MGP_BALBcJ_P0041678 Csnk1e protein_coding protein_coding MGP_BALBcJ_T0041679.1 MGP_BALBcJ_G0022041.1 mouse_genomes_project 15 76944131 76957981 - MGP_BALBcJ_P0041679 Csnk1e protein_coding protein_coding MGP_BALBcJ_T0042125.1 MGP_BALBcJ_G0022181.1 mouse_genomes_project 15 86909997 86919870 + MGP_BALBcJ_P0042125 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042126.1 MGP_BALBcJ_G0022181.1 mouse_genomes_project 15 86909997 86922030 + MGP_BALBcJ_P0042126 protein_coding protein_coding MGP_BALBcJ_T0040484.1 MGP_BALBcJ_G0021668.1 mouse_genomes_project 15 3958211 4021517 + MGP_BALBcJ_P0040484 Lifr protein_coding protein_coding MGP_BALBcJ_T0040485.1 MGP_BALBcJ_G0021668.1 mouse_genomes_project 15 3958224 4014671 + MGP_BALBcJ_P0040485 Lifr protein_coding protein_coding MGP_BALBcJ_T0040486.1 MGP_BALBcJ_G0021668.1 mouse_genomes_project 15 3983249 4027252 + MGP_BALBcJ_P0040486 Lifr protein_coding protein_coding MGP_BALBcJ_T0006727.1 MGP_BALBcJ_G0005552.1 mouse_genomes_project 15 22077829 22125187 - Gm2824 lincRNA lincRNA MGP_BALBcJ_T0006728.1 MGP_BALBcJ_G0005552.1 mouse_genomes_project 15 22100342 22125130 - Gm2824 lincRNA lincRNA MGP_BALBcJ_T0010064.1 MGP_BALBcJ_G0008189.1 mouse_genomes_project 15 85610502 85610596 - Mir6393 miRNA miRNA MGP_BALBcJ_T0042529.1 MGP_BALBcJ_G0022306.1 mouse_genomes_project 15 97726692 97729013 + MGP_BALBcJ_P0042529 Cox14 protein_coding protein_coding MGP_BALBcJ_T0042509.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97618771 97650324 - MGP_BALBcJ_P0042509 Racgap1 protein_coding protein_coding MGP_BALBcJ_T0042510.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97618772 97650337 - MGP_BALBcJ_P0042510 Racgap1 protein_coding protein_coding MGP_BALBcJ_T0042511.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97624989 97631202 - Racgap1 protein_coding retained_intron MGP_BALBcJ_T0042512.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97625269 97650270 - Racgap1 protein_coding processed_transcript MGP_BALBcJ_T0042513.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97627089 97650263 - Racgap1 protein_coding retained_intron MGP_BALBcJ_T0042514.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97627089 97636666 - Racgap1 protein_coding retained_intron MGP_BALBcJ_T0042515.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97627089 97638217 - MGP_BALBcJ_P0042515 Racgap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042516.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97630532 97650333 - MGP_BALBcJ_P0042516 Racgap1 protein_coding protein_coding MGP_BALBcJ_T0042517.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97630548 97633171 - Racgap1 protein_coding retained_intron MGP_BALBcJ_T0042518.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97632689 97650250 - MGP_BALBcJ_P0042518 Racgap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042519.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97634551 97650293 - MGP_BALBcJ_P0042519 Racgap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042520.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97635855 97650263 - Racgap1 protein_coding retained_intron MGP_BALBcJ_T0042521.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97636070 97650293 - MGP_BALBcJ_P0042521 Racgap1 protein_coding protein_coding MGP_BALBcJ_T0042522.1 MGP_BALBcJ_G0022301.1 mouse_genomes_project 15 97638198 97650324 - MGP_BALBcJ_P0042522 Racgap1 protein_coding protein_coding MGP_BALBcJ_T0010075.1 MGP_BALBcJ_G0008200.1 mouse_genomes_project 15 99437441 99437524 + Mir1941 miRNA miRNA MGP_BALBcJ_T0042293.1 MGP_BALBcJ_G0022224.1 mouse_genomes_project 15 92418977 92440419 - MGP_BALBcJ_P0042293 Pus7l protein_coding protein_coding MGP_BALBcJ_T0042294.1 MGP_BALBcJ_G0022224.1 mouse_genomes_project 15 92433055 92440365 - Pus7l protein_coding retained_intron MGP_BALBcJ_T0042295.1 MGP_BALBcJ_G0022224.1 mouse_genomes_project 15 92437611 92440358 - MGP_BALBcJ_P0042295 Pus7l protein_coding protein_coding MGP_BALBcJ_T0041551.1 MGP_BALBcJ_G0022008.1 mouse_genomes_project 15 75871284 75877564 - MGP_BALBcJ_P0041551 Tst protein_coding protein_coding MGP_BALBcJ_T0040577.1 MGP_BALBcJ_G0021691.1 mouse_genomes_project 15 7350167 7381741 - MGP_BALBcJ_P0040577 Ttc23l protein_coding protein_coding MGP_BALBcJ_T0040578.1 MGP_BALBcJ_G0021691.1 mouse_genomes_project 15 7354012 7409461 - MGP_BALBcJ_P0040578 Ttc23l protein_coding protein_coding MGP_BALBcJ_T0040579.1 MGP_BALBcJ_G0021691.1 mouse_genomes_project 15 7388868 7409443 - MGP_BALBcJ_P0040579 Ttc23l protein_coding protein_coding MGP_BALBcJ_T0041924.1 MGP_BALBcJ_G0022112.1 mouse_genomes_project 15 79992079 80001811 - MGP_BALBcJ_P0041924 Cyp2d22 protein_coding unknown_likely_coding MGP_BALBcJ_T0041689.1 MGP_BALBcJ_G0022047.1 mouse_genomes_project 15 77203749 77212168 + MGP_BALBcJ_P0041689 Cby1 protein_coding protein_coding MGP_BALBcJ_T0003602.1 MGP_BALBcJ_G0003264.1 mouse_genomes_project 15 80849886 80853732 - Gm17206 antisense antisense MGP_BALBcJ_T0041268.1 MGP_BALBcJ_G0021934.1 mouse_genomes_project 15 73242631 73251057 + MGP_BALBcJ_P0041268 Zfp623 protein_coding protein_coding MGP_BALBcJ_T0041036.1 MGP_BALBcJ_G0021863.1 mouse_genomes_project 15 61914369 62145331 - MGP_BALBcJ_P0041036 Adcy8 protein_coding protein_coding MGP_BALBcJ_T0099497.1 MGP_BALBcJ_G0037533.1 mouse_genomes_project 15 97942885 97943020 - Gm23133 snRNA snRNA MGP_BALBcJ_T0040584.1 MGP_BALBcJ_G0021694.1 mouse_genomes_project 15 7811911 7827452 + MGP_BALBcJ_P0040584 Amacr protein_coding protein_coding MGP_BALBcJ_T0010069.1 MGP_BALBcJ_G0008194.1 mouse_genomes_project 15 93819062 93819157 - Gm25070 miRNA miRNA MGP_BALBcJ_T0040827.1 MGP_BALBcJ_G0021781.1 mouse_genomes_project 15 36120095 36156554 + MGP_BALBcJ_P0040827 Dcaf13 protein_coding protein_coding MGP_BALBcJ_T0042088.1 MGP_BALBcJ_G0022169.1 mouse_genomes_project 15 85439012 85573560 + MGP_BALBcJ_P0042088 Fam19a5 protein_coding protein_coding MGP_BALBcJ_T0013056.1 MGP_BALBcJ_G0011153.1 mouse_genomes_project 15 70714132 70718471 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013058.1 MGP_BALBcJ_G0011155.1 mouse_genomes_project 15 73049953 73137620 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100764.1 MGP_BALBcJ_G0038800.1 mouse_genomes_project 15 73056241 73056372 + Gm23747 snoRNA snoRNA MGP_BALBcJ_T0040905.1 MGP_BALBcJ_G0021815.1 mouse_genomes_project 15 51723096 51754806 + MGP_BALBcJ_P0040905 Mal2 protein_coding protein_coding MGP_BALBcJ_T0041829.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79260244 79289018 + MGP_BALBcJ_P0041829 L3mbtl2 protein_coding protein_coding MGP_BALBcJ_T0041830.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79260289 79289008 + MGP_BALBcJ_P0041830 L3mbtl2 protein_coding protein_coding MGP_BALBcJ_T0041831.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79260309 79289008 + L3mbtl2 protein_coding retained_intron MGP_BALBcJ_T0041832.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79260311 79289002 + L3mbtl2 protein_coding processed_transcript MGP_BALBcJ_T0041833.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79260311 79289018 + MGP_BALBcJ_P0041833 L3mbtl2 protein_coding protein_coding MGP_BALBcJ_T0041834.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79260356 79282768 + L3mbtl2 protein_coding processed_transcript MGP_BALBcJ_T0041835.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79267760 79269451 + L3mbtl2 protein_coding retained_intron MGP_BALBcJ_T0041836.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79267829 79275124 + L3mbtl2 protein_coding processed_transcript MGP_BALBcJ_T0041837.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79275012 79276785 + MGP_BALBcJ_P0041837 L3mbtl2 protein_coding protein_coding MGP_BALBcJ_T0041839.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79282711 79284553 + L3mbtl2 protein_coding retained_intron MGP_BALBcJ_T0041840.1 MGP_BALBcJ_G0022083.1 mouse_genomes_project 15 79286724 79287890 + L3mbtl2 protein_coding retained_intron MGP_BALBcJ_T0042090.1 MGP_BALBcJ_G0022171.1 mouse_genomes_project 15 86512145 86559145 - MGP_BALBcJ_P0042090 Brd1 protein_coding protein_coding MGP_BALBcJ_T0042091.1 MGP_BALBcJ_G0022171.1 mouse_genomes_project 15 86513141 86555655 - MGP_BALBcJ_P0042091 Brd1 protein_coding protein_coding MGP_BALBcJ_T0042092.1 MGP_BALBcJ_G0022171.1 mouse_genomes_project 15 86520890 86525693 - Brd1 protein_coding processed_transcript MGP_BALBcJ_T0042093.1 MGP_BALBcJ_G0022171.1 mouse_genomes_project 15 86523679 86559142 - MGP_BALBcJ_P0042093 Brd1 protein_coding protein_coding MGP_BALBcJ_T0042094.1 MGP_BALBcJ_G0022171.1 mouse_genomes_project 15 86537707 86543960 - Brd1 protein_coding processed_transcript MGP_BALBcJ_T0042095.1 MGP_BALBcJ_G0022171.1 mouse_genomes_project 15 86538240 86541845 - Brd1 protein_coding processed_transcript MGP_BALBcJ_T0041295.1 MGP_BALBcJ_G0021942.1 mouse_genomes_project 15 73388216 73394199 - MGP_BALBcJ_P0041295 protein_coding protein_coding MGP_BALBcJ_T0041977.1 MGP_BALBcJ_G0022133.1 mouse_genomes_project 15 81342017 81362059 - MGP_BALBcJ_P0041977 Ttll12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041978.1 MGP_BALBcJ_G0022133.1 mouse_genomes_project 15 81342542 81362059 - MGP_BALBcJ_P0041978 Ttll12 protein_coding protein_coding MGP_BALBcJ_T0041979.1 MGP_BALBcJ_G0022133.1 mouse_genomes_project 15 81348665 81353791 - Ttll12 protein_coding retained_intron MGP_BALBcJ_T0041879.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79598628 79633386 + MGP_BALBcJ_P0041879 Xrcc6 protein_coding protein_coding MGP_BALBcJ_T0041886.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79627231 79651390 + MGP_BALBcJ_P0041886 Xrcc6 protein_coding protein_coding MGP_BALBcJ_T0041887.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79627296 79636461 + MGP_BALBcJ_P0041887 Xrcc6 protein_coding protein_coding MGP_BALBcJ_T0041888.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79627347 79636510 + MGP_BALBcJ_P0041888 Xrcc6 protein_coding protein_coding MGP_BALBcJ_T0041889.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79633094 79633742 + Xrcc6 protein_coding retained_intron MGP_BALBcJ_T0041890.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79633787 79638582 + Xrcc6 protein_coding retained_intron MGP_BALBcJ_T0041891.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79636212 79640415 + Xrcc6 protein_coding retained_intron MGP_BALBcJ_T0041892.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79638889 79651099 + Xrcc6 protein_coding processed_transcript MGP_BALBcJ_T0041893.1 MGP_BALBcJ_G0022095.1 mouse_genomes_project 15 79639882 79648794 + Xrcc6 protein_coding retained_intron MGP_BALBcJ_T0042289.1 MGP_BALBcJ_G0022223.1 mouse_genomes_project 15 92155356 92290323 - MGP_BALBcJ_P0042289 Adamts20 protein_coding protein_coding MGP_BALBcJ_T0042290.1 MGP_BALBcJ_G0022223.1 mouse_genomes_project 15 92204347 92290323 - MGP_BALBcJ_P0042290 Adamts20 protein_coding protein_coding MGP_BALBcJ_T0042291.1 MGP_BALBcJ_G0022223.1 mouse_genomes_project 15 92236556 92290415 - Adamts20 protein_coding retained_intron MGP_BALBcJ_T0042292.1 MGP_BALBcJ_G0022223.1 mouse_genomes_project 15 92280798 92351108 - Adamts20 protein_coding processed_transcript MGP_BALBcJ_T0040841.1 MGP_BALBcJ_G0021786.1 mouse_genomes_project 15 37152250 37158750 + MGP_BALBcJ_P0040841 9330182O14Rik protein_coding protein_coding MGP_BALBcJ_T0042057.1 MGP_BALBcJ_G0022160.1 mouse_genomes_project 15 83600914 83605727 - MGP_BALBcJ_P0042057 Cdpf1 protein_coding protein_coding MGP_BALBcJ_T0042058.1 MGP_BALBcJ_G0022160.1 mouse_genomes_project 15 83601142 83605685 - MGP_BALBcJ_P0042058 Cdpf1 protein_coding protein_coding MGP_BALBcJ_T0042059.1 MGP_BALBcJ_G0022160.1 mouse_genomes_project 15 83601186 83605675 - MGP_BALBcJ_P0042059 Cdpf1 protein_coding protein_coding MGP_BALBcJ_T0042060.1 MGP_BALBcJ_G0022160.1 mouse_genomes_project 15 83601189 83605121 - MGP_BALBcJ_P0042060 Cdpf1 protein_coding protein_coding MGP_BALBcJ_T0042061.1 MGP_BALBcJ_G0022160.1 mouse_genomes_project 15 83601199 83605728 - MGP_BALBcJ_P0042061 Cdpf1 protein_coding protein_coding MGP_BALBcJ_T0042062.1 MGP_BALBcJ_G0022160.1 mouse_genomes_project 15 83602186 83605690 - MGP_BALBcJ_P0042062 Cdpf1 protein_coding protein_coding MGP_BALBcJ_T0040855.1 MGP_BALBcJ_G0021794.1 mouse_genomes_project 15 40929900 40933235 - MGP_BALBcJ_P0040855 Tmem74 protein_coding protein_coding MGP_BALBcJ_T0100733.1 MGP_BALBcJ_G0038769.1 mouse_genomes_project 15 17964342 17964470 + Gm25711 snoRNA snoRNA MGP_BALBcJ_T0003615.1 MGP_BALBcJ_G0003275.1 mouse_genomes_project 15 97766776 97783742 + Gm17058 antisense antisense MGP_BALBcJ_T0042560.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98434140 98469382 - MGP_BALBcJ_P0042560 Slc11a2 protein_coding protein_coding MGP_BALBcJ_T0042561.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98438661 98469329 - MGP_BALBcJ_P0042561 Slc11a2 protein_coding protein_coding MGP_BALBcJ_T0042562.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98443738 98449349 - MGP_BALBcJ_P0042562 Slc11a2 protein_coding protein_coding MGP_BALBcJ_T0042563.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98443926 98449528 - Slc11a2 protein_coding retained_intron MGP_BALBcJ_T0042564.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98452510 98471398 - MGP_BALBcJ_P0042564 Slc11a2 protein_coding protein_coding MGP_BALBcJ_T0042565.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98454375 98469296 - MGP_BALBcJ_P0042565 Slc11a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042566.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98455509 98470540 - MGP_BALBcJ_P0042566 Slc11a2 protein_coding protein_coding MGP_BALBcJ_T0042567.1 MGP_BALBcJ_G0022316.1 mouse_genomes_project 15 98456355 98470418 - MGP_BALBcJ_P0042567 Slc11a2 protein_coding protein_coding MGP_BALBcJ_T0006734.1 MGP_BALBcJ_G0005558.1 mouse_genomes_project 15 35514616 35515936 + Gm26863 lincRNA lincRNA MGP_BALBcJ_T0040672.1 MGP_BALBcJ_G0021724.1 mouse_genomes_project 15 24661613 24687116 - MGP_BALBcJ_P0040672 Otulin protein_coding protein_coding MGP_BALBcJ_T0041177.1 MGP_BALBcJ_G0021906.1 mouse_genomes_project 15 71957175 71968692 + MGP_BALBcJ_P0041177 protein_coding protein_coding MGP_BALBcJ_T0013062.1 MGP_BALBcJ_G0011159.1 mouse_genomes_project 15 74925320 74926372 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017444.1 MGP_BALBcJ_G0015248.1 mouse_genomes_project 15 97245010 97255266 + 1700120C14Rik processed_transcript antisense MGP_BALBcJ_T0017445.1 MGP_BALBcJ_G0015248.1 mouse_genomes_project 15 97245058 97255006 + 1700120C14Rik processed_transcript antisense MGP_BALBcJ_T0017446.1 MGP_BALBcJ_G0015248.1 mouse_genomes_project 15 97245060 97246488 + 1700120C14Rik processed_transcript retained_intron MGP_BALBcJ_T0102258.1 MGP_BALBcJ_G0040074.1 mouse_genomes_project 15 72524888 72526999 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006745.1 MGP_BALBcJ_G0005567.1 mouse_genomes_project 15 43689240 43706907 + 4930548G14Rik lincRNA lincRNA MGP_BALBcJ_T0006746.1 MGP_BALBcJ_G0005567.1 mouse_genomes_project 15 43691388 43691706 + 4930548G14Rik lincRNA lincRNA MGP_BALBcJ_T0041607.1 MGP_BALBcJ_G0022028.1 mouse_genomes_project 15 76518250 76526132 + MGP_BALBcJ_P0041607 Gcat protein_coding protein_coding MGP_BALBcJ_T0041608.1 MGP_BALBcJ_G0022028.1 mouse_genomes_project 15 76518250 76530311 + MGP_BALBcJ_P0041608 Gcat protein_coding protein_coding MGP_BALBcJ_T0041609.1 MGP_BALBcJ_G0022028.1 mouse_genomes_project 15 76529664 76531338 + MGP_BALBcJ_P0041609 Gcat protein_coding protein_coding MGP_BALBcJ_T0006796.1 MGP_BALBcJ_G0005598.1 mouse_genomes_project 15 101223442 101229405 - Gm28876 lincRNA lincRNA MGP_BALBcJ_T0041487.1 MGP_BALBcJ_G0021985.1 mouse_genomes_project 15 74262565 74264802 + MGP_BALBcJ_P0041487 1110038F14Rik protein_coding protein_coding MGP_BALBcJ_T0041872.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79561142 79570964 - MGP_BALBcJ_P0041872 Pmm1 protein_coding protein_coding MGP_BALBcJ_T0041873.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79561142 79570903 - MGP_BALBcJ_P0041873 Pmm1 protein_coding protein_coding MGP_BALBcJ_T0041874.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79561436 79563543 - Pmm1 protein_coding retained_intron MGP_BALBcJ_T0041875.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79561478 79570876 - MGP_BALBcJ_P0041875 Pmm1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041876.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79561581 79562303 - Pmm1 protein_coding retained_intron MGP_BALBcJ_T0041877.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79565588 79570867 - Pmm1 protein_coding retained_intron MGP_BALBcJ_T0041878.1 MGP_BALBcJ_G0022094.1 mouse_genomes_project 15 79567368 79570798 - Pmm1 protein_coding retained_intron MGP_BALBcJ_T0040849.1 MGP_BALBcJ_G0021789.1 mouse_genomes_project 15 38935459 38939887 - MGP_BALBcJ_P0040849 Abra protein_coding protein_coding MGP_BALBcJ_T0010081.1 MGP_BALBcJ_G0008206.1 mouse_genomes_project 15 99989710 99989821 + Gm44356 miRNA miRNA MGP_BALBcJ_T0042275.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91256461 91268662 - MGP_BALBcJ_P0042275 Zcrb1 protein_coding protein_coding MGP_BALBcJ_T0042276.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91256470 91268695 - MGP_BALBcJ_P0042276 Zcrb1 protein_coding protein_coding MGP_BALBcJ_T0042277.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91256474 91261544 - Zcrb1 protein_coding retained_intron MGP_BALBcJ_T0042278.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91256477 91261741 - Zcrb1 protein_coding retained_intron MGP_BALBcJ_T0042279.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91257981 91258509 - Zcrb1 protein_coding retained_intron MGP_BALBcJ_T0042280.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91258113 91262031 - Zcrb1 protein_coding retained_intron MGP_BALBcJ_T0042281.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91258165 91268695 - MGP_BALBcJ_P0042281 Zcrb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042282.1 MGP_BALBcJ_G0022220.1 mouse_genomes_project 15 91264429 91268634 - Zcrb1 protein_coding retained_intron MGP_BALBcJ_T0013035.1 MGP_BALBcJ_G0011132.1 mouse_genomes_project 15 33871373 33893907 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040834.1 MGP_BALBcJ_G0021784.1 mouse_genomes_project 15 36780765 36874497 - MGP_BALBcJ_P0040834 Dpys protein_coding protein_coding MGP_BALBcJ_T0040835.1 MGP_BALBcJ_G0021784.1 mouse_genomes_project 15 36795299 36874500 - MGP_BALBcJ_P0040835 Dpys protein_coding protein_coding MGP_BALBcJ_T0040836.1 MGP_BALBcJ_G0021784.1 mouse_genomes_project 15 36795306 36805806 - MGP_BALBcJ_P0040836 Dpys protein_coding protein_coding MGP_BALBcJ_T0040837.1 MGP_BALBcJ_G0021784.1 mouse_genomes_project 15 36873611 36874500 - Dpys protein_coding processed_transcript MGP_BALBcJ_T0041710.1 MGP_BALBcJ_G0022054.1 mouse_genomes_project 15 77327239 77371644 - MGP_BALBcJ_P0041710 Npcd protein_coding protein_coding MGP_BALBcJ_T0041711.1 MGP_BALBcJ_G0022054.1 mouse_genomes_project 15 77327239 77371644 - MGP_BALBcJ_P0041711 Npcd protein_coding protein_coding MGP_BALBcJ_T0041740.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77611573 77619843 - MGP_BALBcJ_P0041740 Rpl3 protein_coding unknown_likely_coding MGP_BALBcJ_T0041741.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77611582 77619019 - Rpl3 protein_coding retained_intron MGP_BALBcJ_T0041742.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77611583 77619789 - Rpl3 protein_coding retained_intron MGP_BALBcJ_T0041743.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77611584 77619789 - MGP_BALBcJ_P0041743 Rpl3 protein_coding protein_coding MGP_BALBcJ_T0041744.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77616381 77619769 - MGP_BALBcJ_P0041744 Rpl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041745.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77616866 77631361 - MGP_BALBcJ_P0041745 Rpl3 protein_coding protein_coding MGP_BALBcJ_T0041746.1 MGP_BALBcJ_G0022059.1 mouse_genomes_project 15 77617953 77619773 - Rpl3 protein_coding retained_intron MGP_BALBcJ_T0041328.1 MGP_BALBcJ_G0021948.1 mouse_genomes_project 15 73608185 73610648 + MGP_BALBcJ_P0041328 Smpd5 protein_coding protein_coding MGP_BALBcJ_T0041329.1 MGP_BALBcJ_G0021948.1 mouse_genomes_project 15 73608719 73610004 + MGP_BALBcJ_P0041329 Smpd5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041330.1 MGP_BALBcJ_G0021948.1 mouse_genomes_project 15 73609002 73610645 + Smpd5 protein_coding retained_intron MGP_BALBcJ_T0041331.1 MGP_BALBcJ_G0021948.1 mouse_genomes_project 15 73609060 73609625 + Smpd5 protein_coding retained_intron MGP_BALBcJ_T0099452.1 MGP_BALBcJ_G0037488.1 mouse_genomes_project 15 20726377 20726535 - Gm23980 snRNA snRNA MGP_BALBcJ_T0041858.1 MGP_BALBcJ_G0022089.1 mouse_genomes_project 15 79451730 79461796 - MGP_BALBcJ_P0041858 Tob2 protein_coding protein_coding MGP_BALBcJ_T0099485.1 MGP_BALBcJ_G0037521.1 mouse_genomes_project 15 78616223 78616374 + Gm25131 snRNA snRNA MGP_BALBcJ_T0040886.1 MGP_BALBcJ_G0021805.1 mouse_genomes_project 15 49066084 49074171 + MGP_BALBcJ_P0040886 Utp23 protein_coding protein_coding MGP_BALBcJ_T0040887.1 MGP_BALBcJ_G0021805.1 mouse_genomes_project 15 49066133 49071937 + MGP_BALBcJ_P0040887 Utp23 protein_coding protein_coding MGP_BALBcJ_T0040888.1 MGP_BALBcJ_G0021805.1 mouse_genomes_project 15 49066160 49071932 + MGP_BALBcJ_P0040888 Utp23 protein_coding protein_coding MGP_BALBcJ_T0040889.1 MGP_BALBcJ_G0021805.1 mouse_genomes_project 15 49066397 49071931 + MGP_BALBcJ_P0040889 Utp23 protein_coding protein_coding MGP_BALBcJ_T0006719.1 MGP_BALBcJ_G0005547.1 mouse_genomes_project 15 850246 870281 + Gm2093 lincRNA lincRNA MGP_BALBcJ_T0041950.1 MGP_BALBcJ_G0022123.1 mouse_genomes_project 15 80861465 80862443 - MGP_BALBcJ_P0041950 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041951.1 MGP_BALBcJ_G0022123.1 mouse_genomes_project 15 80861712 80867789 - MGP_BALBcJ_P0041951 protein_coding unknown_likely_coding MGP_BALBcJ_T0041952.1 MGP_BALBcJ_G0022123.1 mouse_genomes_project 15 80862052 80863173 - protein_coding retained_intron MGP_BALBcJ_T0041953.1 MGP_BALBcJ_G0022123.1 mouse_genomes_project 15 80864072 80866979 - MGP_BALBcJ_P0041953 protein_coding protein_coding MGP_BALBcJ_T0041954.1 MGP_BALBcJ_G0022123.1 mouse_genomes_project 15 80864098 80867806 - MGP_BALBcJ_P0041954 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099458.1 MGP_BALBcJ_G0037494.1 mouse_genomes_project 15 34725098 34725218 - Gm24833 snRNA snRNA MGP_BALBcJ_T0042441.1 MGP_BALBcJ_G0022276.1 mouse_genomes_project 15 96770788 96774755 + MGP_BALBcJ_P0042441 Wnt1 protein_coding protein_coding MGP_BALBcJ_T0041692.1 MGP_BALBcJ_G0022049.1 mouse_genomes_project 15 77218479 77231968 - MGP_BALBcJ_P0041692 Josd1 protein_coding protein_coding MGP_BALBcJ_T0041633.1 MGP_BALBcJ_G0022034.1 mouse_genomes_project 15 76642051 76651655 - MGP_BALBcJ_P0041633 Sox10 protein_coding protein_coding MGP_BALBcJ_T0041364.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667014 73670093 + MGP_BALBcJ_P0041364 Maf1 protein_coding protein_coding MGP_BALBcJ_T0041365.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667014 73670094 + MGP_BALBcJ_P0041365 Maf1 protein_coding protein_coding MGP_BALBcJ_T0041366.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667026 73670094 + MGP_BALBcJ_P0041366 Maf1 protein_coding protein_coding MGP_BALBcJ_T0041367.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667029 73668727 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041368.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667047 73668168 + Maf1 protein_coding processed_transcript MGP_BALBcJ_T0041369.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667047 73670101 + MGP_BALBcJ_P0041369 Maf1 protein_coding protein_coding MGP_BALBcJ_T0041370.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667073 73667788 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041371.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667129 73668620 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041372.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667726 73668907 + MGP_BALBcJ_P0041372 Maf1 protein_coding protein_coding MGP_BALBcJ_T0041373.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73667754 73668621 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041374.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73668490 73669712 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041375.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73668614 73669747 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041376.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73668821 73669794 + Maf1 protein_coding retained_intron MGP_BALBcJ_T0041377.1 MGP_BALBcJ_G0021954.1 mouse_genomes_project 15 73669135 73669836 + MGP_BALBcJ_P0041377 Maf1 protein_coding protein_coding MGP_BALBcJ_T0041204.1 MGP_BALBcJ_G0021914.1 mouse_genomes_project 15 72417135 72422725 + MGP_BALBcJ_P0041204 BC025446 protein_coding protein_coding MGP_BALBcJ_T0041205.1 MGP_BALBcJ_G0021914.1 mouse_genomes_project 15 72417355 72423438 + MGP_BALBcJ_P0041205 BC025446 protein_coding protein_coding MGP_BALBcJ_T0040503.1 MGP_BALBcJ_G0021674.1 mouse_genomes_project 15 5135022 5289880 - MGP_BALBcJ_P0040503 Nipbl protein_coding protein_coding MGP_BALBcJ_T0041764.1 MGP_BALBcJ_G0022068.1 mouse_genomes_project 15 78169850 78198363 + MGP_BALBcJ_P0041764 Grap2 protein_coding protein_coding MGP_BALBcJ_T0042720.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100520303 100525287 + MGP_BALBcJ_P0042720 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042721.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100520488 100551715 + MGP_BALBcJ_P0042721 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042722.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100520493 100551715 + MGP_BALBcJ_P0042722 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042723.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100520540 100555440 + MGP_BALBcJ_P0042723 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042724.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100523806 100525669 + MGP_BALBcJ_P0042724 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042725.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100524320 100525287 + MGP_BALBcJ_P0042725 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042726.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100524639 100525437 + MGP_BALBcJ_P0042726 Sp1 protein_coding protein_coding MGP_BALBcJ_T0042727.1 MGP_BALBcJ_G0022378.1 mouse_genomes_project 15 100548682 100549603 + Sp1 protein_coding processed_transcript MGP_BALBcJ_T0041537.1 MGP_BALBcJ_G0022002.1 mouse_genomes_project 15 75403709 75415536 - MGP_BALBcJ_P0041537 Eif3d protein_coding protein_coding MGP_BALBcJ_T0010068.1 MGP_BALBcJ_G0008193.1 mouse_genomes_project 15 88061512 88061565 + Mir7648 miRNA miRNA MGP_BALBcJ_T0040941.1 MGP_BALBcJ_G0021827.1 mouse_genomes_project 15 54387240 54410830 - MGP_BALBcJ_P0040941 Slc22a22 protein_coding protein_coding MGP_BALBcJ_T0040942.1 MGP_BALBcJ_G0021827.1 mouse_genomes_project 15 54387244 54609903 - MGP_BALBcJ_P0040942 Slc22a22 protein_coding protein_coding MGP_BALBcJ_T0040943.1 MGP_BALBcJ_G0021827.1 mouse_genomes_project 15 54400053 54410806 - MGP_BALBcJ_P0040943 Slc22a22 protein_coding protein_coding MGP_BALBcJ_T0041093.1 MGP_BALBcJ_G0021877.1 mouse_genomes_project 15 64291359 64368886 - MGP_BALBcJ_P0041093 St3gal1 protein_coding unknown_likely_coding MGP_BALBcJ_T0010057.1 MGP_BALBcJ_G0008182.1 mouse_genomes_project 15 80699611 80699690 - Mir3080 miRNA miRNA MGP_BALBcJ_T0040512.1 MGP_BALBcJ_G0021676.1 mouse_genomes_project 15 5832023 5890548 + MGP_BALBcJ_P0040512 Ranbp3l protein_coding protein_coding MGP_BALBcJ_T0040513.1 MGP_BALBcJ_G0021676.1 mouse_genomes_project 15 5832023 5863162 + MGP_BALBcJ_P0040513 Ranbp3l protein_coding protein_coding MGP_BALBcJ_T0040514.1 MGP_BALBcJ_G0021676.1 mouse_genomes_project 15 5832023 5889004 + MGP_BALBcJ_P0040514 Ranbp3l protein_coding unknown_likely_coding MGP_BALBcJ_T0042006.1 MGP_BALBcJ_G0022140.1 mouse_genomes_project 15 81964741 81986818 + MGP_BALBcJ_P0042006 Samm50 protein_coding protein_coding MGP_BALBcJ_T0040912.1 MGP_BALBcJ_G0021819.1 mouse_genomes_project 15 52222335 52236702 - MGP_BALBcJ_P0040912 Dscc1 protein_coding protein_coding MGP_BALBcJ_T0040913.1 MGP_BALBcJ_G0021819.1 mouse_genomes_project 15 52222338 52236691 - MGP_BALBcJ_P0040913 Dscc1 protein_coding protein_coding MGP_BALBcJ_T0040914.1 MGP_BALBcJ_G0021819.1 mouse_genomes_project 15 52229935 52233974 - Dscc1 protein_coding retained_intron MGP_BALBcJ_T0042311.1 MGP_BALBcJ_G0022233.1 mouse_genomes_project 15 94232101 94297968 + MGP_BALBcJ_P0042311 Arid2 protein_coding protein_coding MGP_BALBcJ_T0042312.1 MGP_BALBcJ_G0022233.1 mouse_genomes_project 15 94232156 94350683 + MGP_BALBcJ_P0042312 Arid2 protein_coding protein_coding MGP_BALBcJ_T0042313.1 MGP_BALBcJ_G0022233.1 mouse_genomes_project 15 94302769 94305713 + Arid2 protein_coding retained_intron MGP_BALBcJ_T0042314.1 MGP_BALBcJ_G0022233.1 mouse_genomes_project 15 94318690 94349292 + Arid2 protein_coding retained_intron MGP_BALBcJ_T0040856.1 MGP_BALBcJ_G0021795.1 mouse_genomes_project 15 41251595 41294926 + MGP_BALBcJ_P0040856 Trhr protein_coding protein_coding MGP_BALBcJ_T0040857.1 MGP_BALBcJ_G0021795.1 mouse_genomes_project 15 41251693 41293177 + MGP_BALBcJ_P0040857 Trhr protein_coding protein_coding MGP_BALBcJ_T0041933.1 MGP_BALBcJ_G0022120.1 mouse_genomes_project 15 80544217 80650716 - MGP_BALBcJ_P0041933 Tcf20 protein_coding protein_coding MGP_BALBcJ_T0041934.1 MGP_BALBcJ_G0022120.1 mouse_genomes_project 15 80544217 80650716 - MGP_BALBcJ_P0041934 Tcf20 protein_coding protein_coding MGP_BALBcJ_T0042345.1 MGP_BALBcJ_G0022244.1 mouse_genomes_project 15 95748691 95757029 + MGP_BALBcJ_P0042345 Slc48a1 protein_coding protein_coding MGP_BALBcJ_T0042346.1 MGP_BALBcJ_G0022244.1 mouse_genomes_project 15 95748764 95754300 + MGP_BALBcJ_P0042346 Slc48a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042017.1 MGP_BALBcJ_G0022143.1 mouse_genomes_project 15 82155377 82225903 - MGP_BALBcJ_P0042017 1810041L15Rik protein_coding protein_coding MGP_BALBcJ_T0042018.1 MGP_BALBcJ_G0022143.1 mouse_genomes_project 15 82156242 82225119 - MGP_BALBcJ_P0042018 1810041L15Rik protein_coding protein_coding MGP_BALBcJ_T0042019.1 MGP_BALBcJ_G0022143.1 mouse_genomes_project 15 82182770 82225184 - MGP_BALBcJ_P0042019 1810041L15Rik protein_coding protein_coding MGP_BALBcJ_T0042020.1 MGP_BALBcJ_G0022143.1 mouse_genomes_project 15 82193570 82222255 - MGP_BALBcJ_P0042020 1810041L15Rik protein_coding protein_coding MGP_BALBcJ_T0041017.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61312096 61541709 - MGP_BALBcJ_P0041017 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041018.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313776 61541675 - MGP_BALBcJ_P0041018 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041019.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313779 61611576 - MGP_BALBcJ_P0041019 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041020.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313781 61611576 - MGP_BALBcJ_P0041020 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041021.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313781 61611576 - MGP_BALBcJ_P0041021 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041022.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313781 61611576 - MGP_BALBcJ_P0041022 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041023.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313781 61578703 - MGP_BALBcJ_P0041023 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041024.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313781 61611413 - MGP_BALBcJ_P0041024 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041025.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61313859 61611394 - MGP_BALBcJ_P0041025 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041026.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61314687 61578703 - MGP_BALBcJ_P0041026 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041027.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61314687 61578703 - MGP_BALBcJ_P0041027 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041028.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61319511 61327875 - Asap1 protein_coding retained_intron MGP_BALBcJ_T0041029.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61345351 61348084 - Asap1 protein_coding processed_transcript MGP_BALBcJ_T0041030.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61345404 61349120 - Asap1 protein_coding retained_intron MGP_BALBcJ_T0041031.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61384357 61434365 - MGP_BALBcJ_P0041031 Asap1 protein_coding protein_coding MGP_BALBcJ_T0041032.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61398507 61611389 - Asap1 protein_coding processed_transcript MGP_BALBcJ_T0041033.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61416318 61541709 - Asap1 protein_coding retained_intron MGP_BALBcJ_T0041034.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61416812 61540725 - Asap1 protein_coding processed_transcript MGP_BALBcJ_T0041035.1 MGP_BALBcJ_G0021862.1 mouse_genomes_project 15 61434370 61542856 - MGP_BALBcJ_P0041035 Asap1 protein_coding protein_coding MGP_BALBcJ_T0040669.1 MGP_BALBcJ_G0021722.1 mouse_genomes_project 15 24098100 24098831 + MGP_BALBcJ_P0040669 Gm6576 protein_coding protein_coding MGP_BALBcJ_T0013037.1 MGP_BALBcJ_G0011134.1 mouse_genomes_project 15 34542834 34544281 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040842.1 MGP_BALBcJ_G0021787.1 mouse_genomes_project 15 37676023 38150056 + MGP_BALBcJ_P0040842 Zfpm2 protein_coding protein_coding MGP_BALBcJ_T0010065.1 MGP_BALBcJ_G0008190.1 mouse_genomes_project 15 86988600 86988661 - Mir7118 miRNA miRNA MGP_BALBcJ_T0041681.1 MGP_BALBcJ_G0022043.1 mouse_genomes_project 15 77041071 77052377 + MGP_BALBcJ_P0041681 Kdelr3 protein_coding protein_coding MGP_BALBcJ_T0042261.1 MGP_BALBcJ_G0022215.1 mouse_genomes_project 15 89694779 89724036 + MGP_BALBcJ_P0042261 protein_coding protein_coding MGP_BALBcJ_T0042262.1 MGP_BALBcJ_G0022215.1 mouse_genomes_project 15 89694842 89724405 + MGP_BALBcJ_P0042262 protein_coding protein_coding MGP_BALBcJ_T0042263.1 MGP_BALBcJ_G0022215.1 mouse_genomes_project 15 89697932 89724407 + MGP_BALBcJ_P0042263 protein_coding protein_coding MGP_BALBcJ_T0042264.1 MGP_BALBcJ_G0022215.1 mouse_genomes_project 15 89700865 89724409 + MGP_BALBcJ_P0042264 protein_coding protein_coding MGP_BALBcJ_T0042248.1 MGP_BALBcJ_G0022212.1 mouse_genomes_project 15 89031899 89094213 + MGP_BALBcJ_P0042248 CN725425 protein_coding protein_coding MGP_BALBcJ_T0042249.1 MGP_BALBcJ_G0022212.1 mouse_genomes_project 15 89031981 89094213 + MGP_BALBcJ_P0042249 CN725425 protein_coding unknown_likely_coding MGP_BALBcJ_T0042250.1 MGP_BALBcJ_G0022212.1 mouse_genomes_project 15 89064576 89094204 + MGP_BALBcJ_P0042250 CN725425 protein_coding protein_coding MGP_BALBcJ_T0003599.1 MGP_BALBcJ_G0003261.1 mouse_genomes_project 15 76941314 76945700 + Gm16059 antisense antisense MGP_BALBcJ_T0041162.1 MGP_BALBcJ_G0021897.1 mouse_genomes_project 15 71846049 71848280 + MGP_BALBcJ_P0041162 Psca protein_coding protein_coding MGP_BALBcJ_T0042077.1 MGP_BALBcJ_G0022165.1 mouse_genomes_project 15 83698022 83837164 - MGP_BALBcJ_P0042077 Celsr1 protein_coding protein_coding MGP_BALBcJ_T0042078.1 MGP_BALBcJ_G0022165.1 mouse_genomes_project 15 83699969 83837157 - MGP_BALBcJ_P0042078 Celsr1 protein_coding unknown_likely_coding MGP_BALBcJ_T0099492.1 MGP_BALBcJ_G0037528.1 mouse_genomes_project 15 91212295 91212399 + Gm26371 snRNA snRNA MGP_BALBcJ_T0041606.1 MGP_BALBcJ_G0022027.1 mouse_genomes_project 15 76515588 76517875 + MGP_BALBcJ_P0041606 H1f0 protein_coding protein_coding MGP_BALBcJ_T0098522.1 MGP_BALBcJ_G0036576.1 mouse_genomes_project 15 98495055 98495165 + n-R5s43 rRNA rRNA MGP_BALBcJ_T0041060.1 MGP_BALBcJ_G0021870.1 mouse_genomes_project 15 63569147 63689538 - MGP_BALBcJ_P0041060 Lrrc6 protein_coding protein_coding MGP_BALBcJ_T0010077.1 MGP_BALBcJ_G0008202.1 mouse_genomes_project 15 99663449 99663578 + Gm44460 miRNA miRNA MGP_BALBcJ_T0010016.1 MGP_BALBcJ_G0008141.1 mouse_genomes_project 15 32731474 32731552 - Mir875 miRNA miRNA MGP_BALBcJ_T0041766.1 MGP_BALBcJ_G0022070.1 mouse_genomes_project 15 78258691 78492707 + MGP_BALBcJ_P0041766 Tnrc6b protein_coding protein_coding MGP_BALBcJ_T0013071.1 MGP_BALBcJ_G0011168.1 mouse_genomes_project 15 88385567 88386050 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042198.1 MGP_BALBcJ_G0022200.1 mouse_genomes_project 15 87250680 87261377 - MGP_BALBcJ_P0042198 Cpt1b protein_coding protein_coding MGP_BALBcJ_T0042199.1 MGP_BALBcJ_G0022200.1 mouse_genomes_project 15 87253035 87256955 - MGP_BALBcJ_P0042199 Cpt1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042200.1 MGP_BALBcJ_G0022200.1 mouse_genomes_project 15 87259277 87259985 - Cpt1b protein_coding retained_intron MGP_BALBcJ_T0042201.1 MGP_BALBcJ_G0022200.1 mouse_genomes_project 15 87260349 87261309 - MGP_BALBcJ_P0042201 Cpt1b protein_coding protein_coding MGP_BALBcJ_T0099487.1 MGP_BALBcJ_G0037523.1 mouse_genomes_project 15 80907544 80907695 + Rnu12 snRNA snRNA MGP_BALBcJ_T0042702.1 MGP_BALBcJ_G0022373.1 mouse_genomes_project 15 100402237 100429927 + MGP_BALBcJ_P0042702 Espl1 protein_coding protein_coding MGP_BALBcJ_T0042044.1 MGP_BALBcJ_G0022155.1 mouse_genomes_project 15 82980869 83067207 + MGP_BALBcJ_P0042044 Fbln1 protein_coding protein_coding MGP_BALBcJ_T0042045.1 MGP_BALBcJ_G0022155.1 mouse_genomes_project 15 82980925 83032550 + MGP_BALBcJ_P0042045 Fbln1 protein_coding protein_coding MGP_BALBcJ_T0042046.1 MGP_BALBcJ_G0022155.1 mouse_genomes_project 15 83044092 83046111 + Fbln1 protein_coding processed_transcript MGP_BALBcJ_T0013063.1 MGP_BALBcJ_G0011160.1 mouse_genomes_project 15 76026520 76026958 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041353.1 MGP_BALBcJ_G0021952.1 mouse_genomes_project 15 73659241 73661653 + MGP_BALBcJ_P0041353 Cyc1 protein_coding protein_coding MGP_BALBcJ_T0041242.1 MGP_BALBcJ_G0021925.1 mouse_genomes_project 15 73041009 73042089 - MGP_BALBcJ_P0041242 Mafa protein_coding protein_coding MGP_BALBcJ_T0100729.1 MGP_BALBcJ_G0038765.1 mouse_genomes_project 15 2991198 2991330 - Gm23139 snoRNA snoRNA MGP_BALBcJ_T0041763.1 MGP_BALBcJ_G0022067.1 mouse_genomes_project 15 77994349 78107042 - MGP_BALBcJ_P0041763 Enthd1 protein_coding protein_coding MGP_BALBcJ_T0042299.1 MGP_BALBcJ_G0022226.1 mouse_genomes_project 15 92477159 92489083 - MGP_BALBcJ_P0042299 Twf1 protein_coding protein_coding MGP_BALBcJ_T0042300.1 MGP_BALBcJ_G0022226.1 mouse_genomes_project 15 92478871 92484679 - Twf1 protein_coding processed_transcript MGP_BALBcJ_T0042301.1 MGP_BALBcJ_G0022226.1 mouse_genomes_project 15 92480225 92480592 - Twf1 protein_coding retained_intron MGP_BALBcJ_T0042302.1 MGP_BALBcJ_G0022226.1 mouse_genomes_project 15 92483648 92489093 - MGP_BALBcJ_P0042302 Twf1 protein_coding protein_coding MGP_BALBcJ_T0013068.1 MGP_BALBcJ_G0011165.1 mouse_genomes_project 15 81955191 81955488 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041164.1 MGP_BALBcJ_G0021899.1 mouse_genomes_project 15 71855803 71859520 - MGP_BALBcJ_P0041164 Slurp1 protein_coding protein_coding MGP_BALBcJ_T0041165.1 MGP_BALBcJ_G0021899.1 mouse_genomes_project 15 71858149 71859500 - MGP_BALBcJ_P0041165 Slurp1 protein_coding protein_coding MGP_BALBcJ_T0040609.1 MGP_BALBcJ_G0021704.1 mouse_genomes_project 15 9160397 9190356 + MGP_BALBcJ_P0040609 Golph3 protein_coding protein_coding MGP_BALBcJ_T0010019.1 MGP_BALBcJ_G0008144.1 mouse_genomes_project 15 33901694 33901768 - Gm25303 miRNA miRNA MGP_BALBcJ_T0006722.1 MGP_BALBcJ_G0005550.1 mouse_genomes_project 15 8790967 8796581 + 1700047G03Rik lincRNA lincRNA MGP_BALBcJ_T0006723.1 MGP_BALBcJ_G0005550.1 mouse_genomes_project 15 8791028 8797190 + 1700047G03Rik lincRNA lincRNA MGP_BALBcJ_T0006724.1 MGP_BALBcJ_G0005550.1 mouse_genomes_project 15 8791115 8796612 + 1700047G03Rik lincRNA lincRNA MGP_BALBcJ_T0006725.1 MGP_BALBcJ_G0005550.1 mouse_genomes_project 15 8794179 8797175 + 1700047G03Rik lincRNA lincRNA MGP_BALBcJ_T0042557.1 MGP_BALBcJ_G0022314.1 mouse_genomes_project 15 98334520 98350718 + MGP_BALBcJ_P0042557 protein_coding protein_coding MGP_BALBcJ_T0042558.1 MGP_BALBcJ_G0022314.1 mouse_genomes_project 15 98334520 98350718 + MGP_BALBcJ_P0042558 protein_coding protein_coding MGP_BALBcJ_T0099493.1 MGP_BALBcJ_G0037529.1 mouse_genomes_project 15 93516280 93516384 - Gm24668 snRNA snRNA MGP_BALBcJ_T0040515.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5895255 5936230 + Nadk2 protein_coding processed_transcript MGP_BALBcJ_T0040516.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5895255 5936230 + MGP_BALBcJ_P0040516 Nadk2 protein_coding protein_coding MGP_BALBcJ_T0040517.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5895255 5936230 + MGP_BALBcJ_P0040517 Nadk2 protein_coding protein_coding MGP_BALBcJ_T0040518.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5896145 5934005 + MGP_BALBcJ_P0040518 Nadk2 protein_coding unknown_likely_coding MGP_BALBcJ_T0040519.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5896324 5935390 + Nadk2 protein_coding processed_transcript MGP_BALBcJ_T0040520.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5896330 5932820 + Nadk2 protein_coding processed_transcript MGP_BALBcJ_T0040521.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5911223 5932485 + Nadk2 protein_coding processed_transcript MGP_BALBcJ_T0040522.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5925803 5932826 + MGP_BALBcJ_P0040522 Nadk2 protein_coding protein_coding MGP_BALBcJ_T0040523.1 MGP_BALBcJ_G0021677.1 mouse_genomes_project 15 5928635 5932418 + Nadk2 protein_coding retained_intron MGP_BALBcJ_T0041906.1 MGP_BALBcJ_G0022104.1 mouse_genomes_project 15 79852633 79863569 - MGP_BALBcJ_P0041906 Cenpm protein_coding protein_coding MGP_BALBcJ_T0041907.1 MGP_BALBcJ_G0022104.1 mouse_genomes_project 15 79852633 79863569 - MGP_BALBcJ_P0041907 Cenpm protein_coding protein_coding MGP_BALBcJ_T0010027.1 MGP_BALBcJ_G0008152.1 mouse_genomes_project 15 50773141 50773216 - Mir28c miRNA miRNA MGP_BALBcJ_T0011370.1 MGP_BALBcJ_G0009495.1 mouse_genomes_project 15 73581072 73581357 - Mirt2 misc_RNA misc_RNA MGP_BALBcJ_T0100739.1 MGP_BALBcJ_G0038775.1 mouse_genomes_project 15 27115425 27115603 - Gm26163 snoRNA snoRNA MGP_BALBcJ_T0011376.1 MGP_BALBcJ_G0009501.1 mouse_genomes_project 15 97169566 97169654 - Gm25057 misc_RNA misc_RNA MGP_BALBcJ_T0042640.1 MGP_BALBcJ_G0022337.1 mouse_genomes_project 15 99479083 99480024 + Krt7 protein_coding processed_transcript MGP_BALBcJ_T0042641.1 MGP_BALBcJ_G0022337.1 mouse_genomes_project 15 99479092 99480436 + Krt7 protein_coding processed_transcript MGP_BALBcJ_T0042642.1 MGP_BALBcJ_G0022337.1 mouse_genomes_project 15 99479092 99499095 + Krt7 protein_coding processed_transcript MGP_BALBcJ_T0042643.1 MGP_BALBcJ_G0022337.1 mouse_genomes_project 15 99479143 99487536 + MGP_BALBcJ_P0042643 Krt7 protein_coding protein_coding MGP_BALBcJ_T0042644.1 MGP_BALBcJ_G0022337.1 mouse_genomes_project 15 99480442 99501811 + MGP_BALBcJ_P0042644 Krt7 protein_coding protein_coding MGP_BALBcJ_T0042645.1 MGP_BALBcJ_G0022337.1 mouse_genomes_project 15 99480489 99499273 + Krt7 protein_coding retained_intron MGP_BALBcJ_T0042669.1 MGP_BALBcJ_G0022359.1 mouse_genomes_project 15 100029531 100040513 - MGP_BALBcJ_P0042669 Krt79 protein_coding protein_coding MGP_BALBcJ_T0042315.1 MGP_BALBcJ_G0022234.1 mouse_genomes_project 15 94358414 94408175 - MGP_BALBcJ_P0042315 Scaf11 protein_coding unknown_likely_coding MGP_BALBcJ_T0042316.1 MGP_BALBcJ_G0022234.1 mouse_genomes_project 15 94358416 94408324 - MGP_BALBcJ_P0042316 Scaf11 protein_coding protein_coding MGP_BALBcJ_T0102008.1 MGP_BALBcJ_G0039847.1 mouse_genomes_project 15 72936056 72941359 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102009.1 MGP_BALBcJ_G0039847.1 mouse_genomes_project 15 72936402 72938407 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102010.1 MGP_BALBcJ_G0039847.1 mouse_genomes_project 15 72936411 72947649 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0102011.1 MGP_BALBcJ_G0039847.1 mouse_genomes_project 15 72937413 72940889 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0102012.1 MGP_BALBcJ_G0039847.1 mouse_genomes_project 15 72938426 72940654 + unitary_pseudogene retained_intron MGP_BALBcJ_T0102013.1 MGP_BALBcJ_G0039847.1 mouse_genomes_project 15 72938590 72940407 + unitary_pseudogene processed_transcript MGP_BALBcJ_T0041634.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734099 76754739 + MGP_BALBcJ_P0041634 Pick1 protein_coding protein_coding MGP_BALBcJ_T0041635.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734308 76754721 + MGP_BALBcJ_P0041635 Pick1 protein_coding protein_coding MGP_BALBcJ_T0041636.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734317 76761932 + MGP_BALBcJ_P0041636 Pick1 protein_coding protein_coding MGP_BALBcJ_T0041637.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734337 76753217 + Pick1 protein_coding retained_intron MGP_BALBcJ_T0041638.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734342 76753217 + Pick1 protein_coding retained_intron MGP_BALBcJ_T0041639.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734384 76739259 + Pick1 protein_coding processed_transcript MGP_BALBcJ_T0041640.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734431 76746691 + Pick1 protein_coding retained_intron MGP_BALBcJ_T0041641.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76734629 76754584 + MGP_BALBcJ_P0041641 Pick1 protein_coding protein_coding MGP_BALBcJ_T0041642.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76748289 76752882 + Pick1 protein_coding processed_transcript MGP_BALBcJ_T0041643.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76750122 76752850 + Pick1 protein_coding processed_transcript MGP_BALBcJ_T0041644.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76750519 76752986 + Pick1 protein_coding processed_transcript MGP_BALBcJ_T0041645.1 MGP_BALBcJ_G0022035.1 mouse_genomes_project 15 76751584 76754721 + Pick1 protein_coding processed_transcript MGP_BALBcJ_T0041816.1 MGP_BALBcJ_G0022079.1 mouse_genomes_project 15 78983648 78985022 - MGP_BALBcJ_P0041816 Dnajb7 protein_coding protein_coding MGP_BALBcJ_T0017434.1 MGP_BALBcJ_G0015244.1 mouse_genomes_project 15 78761253 78763249 + 4930483J18Rik processed_transcript processed_transcript MGP_BALBcJ_T0017435.1 MGP_BALBcJ_G0015244.1 mouse_genomes_project 15 78761332 78763242 + 4930483J18Rik processed_transcript processed_transcript MGP_BALBcJ_T0099448.1 MGP_BALBcJ_G0037484.1 mouse_genomes_project 15 1874500 1874603 + Gm25652 snRNA snRNA MGP_BALBcJ_T0040683.1 MGP_BALBcJ_G0021731.1 mouse_genomes_project 15 28333928 28410395 - MGP_BALBcJ_P0040683 Ankrd33b protein_coding protein_coding MGP_BALBcJ_T0040684.1 MGP_BALBcJ_G0021731.1 mouse_genomes_project 15 28333928 28410362 - MGP_BALBcJ_P0040684 Ankrd33b protein_coding protein_coding MGP_BALBcJ_T0040685.1 MGP_BALBcJ_G0021731.1 mouse_genomes_project 15 28335274 28410168 - MGP_BALBcJ_P0040685 Ankrd33b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040686.1 MGP_BALBcJ_G0021731.1 mouse_genomes_project 15 28336183 28410362 - MGP_BALBcJ_P0040686 Ankrd33b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040687.1 MGP_BALBcJ_G0021731.1 mouse_genomes_project 15 28366028 28410204 - MGP_BALBcJ_P0040687 Ankrd33b protein_coding protein_coding MGP_BALBcJ_T0010026.1 MGP_BALBcJ_G0008151.1 mouse_genomes_project 15 48068047 48068137 - Mir1907 miRNA miRNA MGP_BALBcJ_T0042043.1 MGP_BALBcJ_G0022154.1 mouse_genomes_project 15 82911062 82923538 + MGP_BALBcJ_P0042043 Ribc2 protein_coding protein_coding MGP_BALBcJ_T0017441.1 MGP_BALBcJ_G0015246.1 mouse_genomes_project 15 87356474 87360053 - Gm15609 processed_transcript processed_transcript MGP_BALBcJ_T0003588.1 MGP_BALBcJ_G0003255.1 mouse_genomes_project 15 68923968 68927643 + Gm16308 antisense antisense MGP_BALBcJ_T0041539.1 MGP_BALBcJ_G0022004.1 mouse_genomes_project 15 75607801 75622433 - MGP_BALBcJ_P0041539 Ift27 protein_coding protein_coding MGP_BALBcJ_T0040443.1 MGP_BALBcJ_G0021658.1 mouse_genomes_project 15 1956443 1958971 + MGP_BALBcJ_P0040443 Rpl37 protein_coding protein_coding MGP_BALBcJ_T0040589.1 MGP_BALBcJ_G0021699.1 mouse_genomes_project 15 8670533 8738726 - MGP_BALBcJ_P0040589 Npr3 protein_coding protein_coding MGP_BALBcJ_T0042380.1 MGP_BALBcJ_G0022250.1 mouse_genomes_project 15 96062049 96100303 + MGP_BALBcJ_P0042380 Pfkm protein_coding protein_coding MGP_BALBcJ_T0040536.1 MGP_BALBcJ_G0021682.1 mouse_genomes_project 15 6264610 6293134 + MGP_BALBcJ_P0040536 Capsl protein_coding protein_coding MGP_BALBcJ_T0040558.1 MGP_BALBcJ_G0021687.1 mouse_genomes_project 15 7207696 7223004 + MGP_BALBcJ_P0040558 Agxt2 protein_coding protein_coding MGP_BALBcJ_T0040559.1 MGP_BALBcJ_G0021687.1 mouse_genomes_project 15 7207701 7259091 + MGP_BALBcJ_P0040559 Agxt2 protein_coding protein_coding MGP_BALBcJ_T0040560.1 MGP_BALBcJ_G0021687.1 mouse_genomes_project 15 7207701 7230662 + MGP_BALBcJ_P0040560 Agxt2 protein_coding protein_coding MGP_BALBcJ_T0040561.1 MGP_BALBcJ_G0021687.1 mouse_genomes_project 15 7207743 7258676 + MGP_BALBcJ_P0040561 Agxt2 protein_coding protein_coding MGP_BALBcJ_T0040797.1 MGP_BALBcJ_G0021770.1 mouse_genomes_project 15 34546890 34561964 + MGP_BALBcJ_P0040797 4930447A16Rik protein_coding protein_coding MGP_BALBcJ_T0040999.1 MGP_BALBcJ_G0021854.1 mouse_genomes_project 15 57949941 57956027 - MGP_BALBcJ_P0040999 Fam84b protein_coding protein_coding MGP_BALBcJ_T0041000.1 MGP_BALBcJ_G0021854.1 mouse_genomes_project 15 57955978 57984894 - Fam84b protein_coding processed_transcript MGP_BALBcJ_T0042329.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95708891 95731635 - MGP_BALBcJ_P0042329 Rapgef3 protein_coding protein_coding MGP_BALBcJ_T0042330.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95708894 95731501 - MGP_BALBcJ_P0042330 Rapgef3 protein_coding protein_coding MGP_BALBcJ_T0042331.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95709106 95731503 - MGP_BALBcJ_P0042331 Rapgef3 protein_coding protein_coding MGP_BALBcJ_T0042332.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95709223 95731257 - MGP_BALBcJ_P0042332 Rapgef3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042333.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95709306 95712811 - Rapgef3 protein_coding retained_intron MGP_BALBcJ_T0042334.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95709486 95731237 - MGP_BALBcJ_P0042334 Rapgef3 protein_coding protein_coding MGP_BALBcJ_T0042335.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95710466 95731424 - Rapgef3 protein_coding retained_intron MGP_BALBcJ_T0042336.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95713645 95714644 - Rapgef3 protein_coding retained_intron MGP_BALBcJ_T0042337.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95714295 95721441 - Rapgef3 protein_coding retained_intron MGP_BALBcJ_T0042339.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95722835 95724364 - Rapgef3 protein_coding processed_transcript MGP_BALBcJ_T0042340.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95723297 95730883 - MGP_BALBcJ_P0042340 Rapgef3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042341.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95723302 95725818 - Rapgef3 protein_coding processed_transcript MGP_BALBcJ_T0042342.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95724612 95731101 - MGP_BALBcJ_P0042342 Rapgef3 protein_coding protein_coding MGP_BALBcJ_T0042343.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95724635 95725793 - Rapgef3 protein_coding retained_intron MGP_BALBcJ_T0042344.1 MGP_BALBcJ_G0022243.1 mouse_genomes_project 15 95730695 95731809 - MGP_BALBcJ_P0042344 Rapgef3 protein_coding protein_coding MGP_BALBcJ_T0041414.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888136 73907416 + MGP_BALBcJ_P0041414 Adck5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041415.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888156 73907424 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041416.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888182 73903431 + Adck5 protein_coding processed_transcript MGP_BALBcJ_T0041417.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888189 73907417 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041418.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888190 73901333 + Adck5 protein_coding processed_transcript MGP_BALBcJ_T0041419.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888251 73907258 + MGP_BALBcJ_P0041419 Adck5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041420.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73888260 73907401 + MGP_BALBcJ_P0041420 Adck5 protein_coding protein_coding MGP_BALBcJ_T0041421.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73905045 73905778 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041422.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73905508 73906764 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041423.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73905775 73906796 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041424.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73905900 73907424 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041425.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73906429 73906771 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0041426.1 MGP_BALBcJ_G0021966.1 mouse_genomes_project 15 73906571 73907324 + Adck5 protein_coding retained_intron MGP_BALBcJ_T0042176.1 MGP_BALBcJ_G0022192.1 mouse_genomes_project 15 87182814 87187470 - MGP_BALBcJ_P0042176 Lmf2 protein_coding protein_coding MGP_BALBcJ_T0042047.1 MGP_BALBcJ_G0022156.1 mouse_genomes_project 15 83119462 83250611 + MGP_BALBcJ_P0042047 Atxn10 protein_coding protein_coding MGP_BALBcJ_T0006737.1 MGP_BALBcJ_G0005561.1 mouse_genomes_project 15 37522314 37538270 - Gm16294 lincRNA lincRNA MGP_BALBcJ_T0042192.1 MGP_BALBcJ_G0022196.1 mouse_genomes_project 15 87209592 87211397 - MGP_BALBcJ_P0042192 Odf3b protein_coding protein_coding MGP_BALBcJ_T0042193.1 MGP_BALBcJ_G0022196.1 mouse_genomes_project 15 87209648 87211321 - MGP_BALBcJ_P0042193 Odf3b protein_coding unknown_likely_coding MGP_BALBcJ_T0042452.1 MGP_BALBcJ_G0022281.1 mouse_genomes_project 15 96878471 96883969 - MGP_BALBcJ_P0042452 Dhh protein_coding protein_coding MGP_BALBcJ_T0040947.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55051124 55108092 + MGP_BALBcJ_P0040947 Tbc1d31 protein_coding protein_coding MGP_BALBcJ_T0040948.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55051159 55097433 + Tbc1d31 protein_coding processed_transcript MGP_BALBcJ_T0040949.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55051164 55058874 + MGP_BALBcJ_P0040949 Tbc1d31 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040950.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55051930 55097513 + Tbc1d31 protein_coding retained_intron MGP_BALBcJ_T0040951.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55052780 55092091 + Tbc1d31 protein_coding retained_intron MGP_BALBcJ_T0040952.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55054938 55093404 + Tbc1d31 protein_coding retained_intron MGP_BALBcJ_T0040953.1 MGP_BALBcJ_G0021830.1 mouse_genomes_project 15 55096443 55108098 + MGP_BALBcJ_P0040953 Tbc1d31 protein_coding protein_coding MGP_BALBcJ_T0041220.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72842997 72859870 - MGP_BALBcJ_P0041220 Ly6h protein_coding protein_coding MGP_BALBcJ_T0041221.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72846260 72859870 - MGP_BALBcJ_P0041221 Ly6h protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041222.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72857959 72860477 - MGP_BALBcJ_P0041222 Ly6h protein_coding protein_coding MGP_BALBcJ_T0041223.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72857960 72860078 - MGP_BALBcJ_P0041223 Ly6h protein_coding protein_coding MGP_BALBcJ_T0041224.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72857962 72859879 - MGP_BALBcJ_P0041224 Ly6h protein_coding protein_coding MGP_BALBcJ_T0041225.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72858241 72860438 - MGP_BALBcJ_P0041225 Ly6h protein_coding protein_coding MGP_BALBcJ_T0041226.1 MGP_BALBcJ_G0021920.1 mouse_genomes_project 15 72858428 72859854 - Ly6h protein_coding retained_intron MGP_BALBcJ_T0100757.1 MGP_BALBcJ_G0038793.1 mouse_genomes_project 15 57843856 57843988 - Gm23835 snoRNA snoRNA MGP_BALBcJ_T0041582.1 MGP_BALBcJ_G0022021.1 mouse_genomes_project 15 76330677 76335400 - MGP_BALBcJ_P0041582 Lgals2 protein_coding protein_coding MGP_BALBcJ_T0042671.1 MGP_BALBcJ_G0022361.1 mouse_genomes_project 15 100097506 100105580 - MGP_BALBcJ_P0042671 Krt8 protein_coding protein_coding MGP_BALBcJ_T0041380.1 MGP_BALBcJ_G0021957.1 mouse_genomes_project 15 73688706 73691687 - MGP_BALBcJ_P0041380 Tssk5 protein_coding protein_coding MGP_BALBcJ_T0040495.1 MGP_BALBcJ_G0021671.1 mouse_genomes_project 15 4687898 4922239 - MGP_BALBcJ_P0040495 Wdr70 protein_coding protein_coding MGP_BALBcJ_T0010029.1 MGP_BALBcJ_G0008154.1 mouse_genomes_project 15 65499342 65499438 - Mir30b miRNA miRNA MGP_BALBcJ_T0040903.1 MGP_BALBcJ_G0021813.1 mouse_genomes_project 15 51402512 51430364 - MGP_BALBcJ_P0040903 Tnfrsf11b protein_coding protein_coding MGP_BALBcJ_T0040662.1 MGP_BALBcJ_G0021718.1 mouse_genomes_project 15 22932640 23064513 + MGP_BALBcJ_P0040662 Fam134b protein_coding protein_coding MGP_BALBcJ_T0040663.1 MGP_BALBcJ_G0021718.1 mouse_genomes_project 15 23031447 23063166 + MGP_BALBcJ_P0040663 Fam134b protein_coding protein_coding MGP_BALBcJ_T0042670.1 MGP_BALBcJ_G0022360.1 mouse_genomes_project 15 100046104 100054116 - MGP_BALBcJ_P0042670 Krt78 protein_coding protein_coding MGP_BALBcJ_T0099494.1 MGP_BALBcJ_G0037530.1 mouse_genomes_project 15 94625878 94625986 + Gm22045 snRNA snRNA MGP_BALBcJ_T0017423.1 MGP_BALBcJ_G0015235.1 mouse_genomes_project 15 61323626 61326208 + Gm20717 processed_transcript processed_transcript MGP_BALBcJ_T0040703.1 MGP_BALBcJ_G0021739.1 mouse_genomes_project 15 29852674 30094321 + MGP_BALBcJ_P0040703 Sdc2 protein_coding protein_coding MGP_BALBcJ_T0040704.1 MGP_BALBcJ_G0021739.1 mouse_genomes_project 15 29852725 29853257 + Sdc2 protein_coding processed_transcript MGP_BALBcJ_T0040774.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33869442 33897537 - MGP_BALBcJ_P0040774 Ywhaz protein_coding protein_coding MGP_BALBcJ_T0040775.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33870241 33897530 - MGP_BALBcJ_P0040775 Ywhaz protein_coding protein_coding MGP_BALBcJ_T0040776.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33870376 33896836 - MGP_BALBcJ_P0040776 Ywhaz protein_coding protein_coding MGP_BALBcJ_T0040777.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33873695 33896518 - Ywhaz protein_coding retained_intron MGP_BALBcJ_T0040778.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33893710 33895413 - MGP_BALBcJ_P0040778 Ywhaz protein_coding protein_coding MGP_BALBcJ_T0040779.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33893842 33896209 - MGP_BALBcJ_P0040779 Ywhaz protein_coding protein_coding MGP_BALBcJ_T0040780.1 MGP_BALBcJ_G0021765.1 mouse_genomes_project 15 33893897 33897546 - MGP_BALBcJ_P0040780 Ywhaz protein_coding protein_coding MGP_BALBcJ_T0041910.1 MGP_BALBcJ_G0022106.1 mouse_genomes_project 15 79896452 79915974 + MGP_BALBcJ_P0041910 Sept3 protein_coding protein_coding MGP_BALBcJ_T0041911.1 MGP_BALBcJ_G0022106.1 mouse_genomes_project 15 79896764 79913590 + MGP_BALBcJ_P0041911 Sept3 protein_coding protein_coding MGP_BALBcJ_T0040811.1 MGP_BALBcJ_G0021773.1 mouse_genomes_project 15 35346593 35354126 + MGP_BALBcJ_P0040811 Odf1 protein_coding protein_coding MGP_BALBcJ_T0041209.1 MGP_BALBcJ_G0021917.1 mouse_genomes_project 15 72472423 72476165 + MGP_BALBcJ_P0041209 protein_coding protein_coding MGP_BALBcJ_T0041215.1 MGP_BALBcJ_G0021917.1 mouse_genomes_project 15 72472456 72475880 + MGP_BALBcJ_P0041215 protein_coding protein_coding MGP_BALBcJ_T0041216.1 MGP_BALBcJ_G0021917.1 mouse_genomes_project 15 72472506 72476168 + protein_coding retained_intron MGP_BALBcJ_T0041217.1 MGP_BALBcJ_G0021917.1 mouse_genomes_project 15 72472594 72475994 + MGP_BALBcJ_P0041217 protein_coding protein_coding MGP_BALBcJ_T0000928.1 MGP_BALBcJ_G0000859.1 mouse_genomes_project 15 9475162 9477447 - TEC TEC MGP_BALBcJ_T0006775.1 MGP_BALBcJ_G0005583.1 mouse_genomes_project 15 87037932 87041193 - Gm26798 lincRNA lincRNA MGP_BALBcJ_T0041094.1 MGP_BALBcJ_G0021878.1 mouse_genomes_project 15 65239917 65417204 - MGP_BALBcJ_P0041094 Zfat protein_coding protein_coding MGP_BALBcJ_T0041095.1 MGP_BALBcJ_G0021878.1 mouse_genomes_project 15 65240472 65417135 - MGP_BALBcJ_P0041095 Zfat protein_coding protein_coding MGP_BALBcJ_T0041096.1 MGP_BALBcJ_G0021878.1 mouse_genomes_project 15 65240473 65417186 - MGP_BALBcJ_P0041096 Zfat protein_coding protein_coding MGP_BALBcJ_T0041097.1 MGP_BALBcJ_G0021878.1 mouse_genomes_project 15 65338483 65417195 - MGP_BALBcJ_P0041097 Zfat protein_coding protein_coding MGP_BALBcJ_T0041098.1 MGP_BALBcJ_G0021878.1 mouse_genomes_project 15 65380166 65417197 - Zfat protein_coding retained_intron MGP_BALBcJ_T0040567.1 MGP_BALBcJ_G0021689.1 mouse_genomes_project 15 7324707 7336214 - MGP_BALBcJ_P0040567 Brix1 protein_coding protein_coding MGP_BALBcJ_T0040568.1 MGP_BALBcJ_G0021689.1 mouse_genomes_project 15 7329042 7335653 - MGP_BALBcJ_P0040568 Brix1 protein_coding protein_coding MGP_BALBcJ_T0040569.1 MGP_BALBcJ_G0021689.1 mouse_genomes_project 15 7329413 7336176 - MGP_BALBcJ_P0040569 Brix1 protein_coding protein_coding MGP_BALBcJ_T0040570.1 MGP_BALBcJ_G0021689.1 mouse_genomes_project 15 7329855 7336154 - MGP_BALBcJ_P0040570 Brix1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040431.1 MGP_BALBcJ_G0021653.1 mouse_genomes_project 15 1226113 1367142 + MGP_BALBcJ_P0040431 Plcxd3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040432.1 MGP_BALBcJ_G0021653.1 mouse_genomes_project 15 1226126 1426332 + MGP_BALBcJ_P0040432 Plcxd3 protein_coding protein_coding MGP_BALBcJ_T0041914.1 MGP_BALBcJ_G0022109.1 mouse_genomes_project 15 79964100 79968428 + Fam109b protein_coding processed_transcript MGP_BALBcJ_T0041916.1 MGP_BALBcJ_G0022109.1 mouse_genomes_project 15 79965707 79968442 + Fam109b protein_coding processed_transcript MGP_BALBcJ_T0041917.1 MGP_BALBcJ_G0022109.1 mouse_genomes_project 15 79966012 79970894 + MGP_BALBcJ_P0041917 Fam109b protein_coding protein_coding MGP_BALBcJ_T0041919.1 MGP_BALBcJ_G0022109.1 mouse_genomes_project 15 79966333 79970881 + MGP_BALBcJ_P0041919 Fam109b protein_coding protein_coding MGP_BALBcJ_T0102257.1 MGP_BALBcJ_G0040073.1 mouse_genomes_project 15 72523152 72523381 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042118.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86895866 86906223 + MGP_BALBcJ_P0042118 Trabd protein_coding protein_coding MGP_BALBcJ_T0042119.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86896755 86907991 + MGP_BALBcJ_P0042119 Trabd protein_coding protein_coding MGP_BALBcJ_T0042120.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86896814 86907985 + MGP_BALBcJ_P0042120 Trabd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042121.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86896836 86907044 + MGP_BALBcJ_P0042121 Trabd protein_coding protein_coding MGP_BALBcJ_T0042122.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86896866 86907047 + MGP_BALBcJ_P0042122 Trabd protein_coding protein_coding MGP_BALBcJ_T0042123.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86903442 86907985 + Trabd protein_coding retained_intron MGP_BALBcJ_T0042124.1 MGP_BALBcJ_G0022180.1 mouse_genomes_project 15 86905622 86906538 + Trabd protein_coding retained_intron MGP_BALBcJ_T0042663.1 MGP_BALBcJ_G0022353.1 mouse_genomes_project 15 99894520 99903556 - MGP_BALBcJ_P0042663 Krt73 protein_coding protein_coding MGP_BALBcJ_T0042659.1 MGP_BALBcJ_G0022350.1 mouse_genomes_project 15 99835287 99844325 - MGP_BALBcJ_P0042659 Krt71 protein_coding protein_coding MGP_BALBcJ_T0042658.1 MGP_BALBcJ_G0022349.1 mouse_genomes_project 15 99806373 99813902 - MGP_BALBcJ_P0042658 Krt5 protein_coding protein_coding MGP_BALBcJ_T0042403.1 MGP_BALBcJ_G0022261.1 mouse_genomes_project 15 96404295 96410028 + MGP_BALBcJ_P0042403 Olfr282 protein_coding protein_coding MGP_BALBcJ_T0042404.1 MGP_BALBcJ_G0022261.1 mouse_genomes_project 15 96409582 96410510 + MGP_BALBcJ_P0042404 Olfr282 protein_coding protein_coding MGP_BALBcJ_T0040524.1 MGP_BALBcJ_G0021678.1 mouse_genomes_project 15 5937727 5967339 - MGP_BALBcJ_P0040524 Skp2 protein_coding protein_coding MGP_BALBcJ_T0040525.1 MGP_BALBcJ_G0021678.1 mouse_genomes_project 15 5937727 5967413 - MGP_BALBcJ_P0040525 Skp2 protein_coding protein_coding MGP_BALBcJ_T0040526.1 MGP_BALBcJ_G0021678.1 mouse_genomes_project 15 5939044 5982394 - MGP_BALBcJ_P0040526 Skp2 protein_coding protein_coding MGP_BALBcJ_T0040527.1 MGP_BALBcJ_G0021678.1 mouse_genomes_project 15 5952792 5967326 - Skp2 protein_coding retained_intron MGP_BALBcJ_T0040529.1 MGP_BALBcJ_G0021678.1 mouse_genomes_project 15 5979250 5982395 - Skp2 protein_coding processed_transcript MGP_BALBcJ_T0040867.1 MGP_BALBcJ_G0021801.1 mouse_genomes_project 15 42145864 42154972 - MGP_BALBcJ_P0040867 Kcnv1 protein_coding protein_coding MGP_BALBcJ_T0000939.1 MGP_BALBcJ_G0000870.1 mouse_genomes_project 15 94653459 94653924 + TEC TEC MGP_BALBcJ_T0100758.1 MGP_BALBcJ_G0038794.1 mouse_genomes_project 15 58488853 58488987 - Gm24696 snoRNA snoRNA MGP_BALBcJ_T0040585.1 MGP_BALBcJ_G0021695.1 mouse_genomes_project 15 7831318 7859807 + MGP_BALBcJ_P0040585 Slc45a2 protein_coding protein_coding MGP_BALBcJ_T0040404.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 127193 134451 + MGP_BALBcJ_P0040404 protein_coding protein_coding MGP_BALBcJ_T0040405.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 129413 139177 + MGP_BALBcJ_P0040405 protein_coding protein_coding MGP_BALBcJ_T0040406.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 129457 134404 + MGP_BALBcJ_P0040406 protein_coding protein_coding MGP_BALBcJ_T0040407.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 129567 139176 + MGP_BALBcJ_P0040407 protein_coding protein_coding MGP_BALBcJ_T0040408.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 129644 134333 + MGP_BALBcJ_P0040408 protein_coding protein_coding MGP_BALBcJ_T0040409.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 129645 133791 + protein_coding retained_intron MGP_BALBcJ_T0040410.1 MGP_BALBcJ_G0021647.1 mouse_genomes_project 15 130753 135940 + MGP_BALBcJ_P0040410 protein_coding protein_coding MGP_BALBcJ_T0042068.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83678328 83691863 + MGP_BALBcJ_P0042068 Trmu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042069.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83678336 83696658 + MGP_BALBcJ_P0042069 Trmu protein_coding protein_coding MGP_BALBcJ_T0042070.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83678397 83681864 + MGP_BALBcJ_P0042070 Trmu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042071.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83678430 83693219 + Trmu protein_coding retained_intron MGP_BALBcJ_T0042072.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83684185 83695692 + MGP_BALBcJ_P0042072 Trmu protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042073.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83691841 83693741 + Trmu protein_coding retained_intron MGP_BALBcJ_T0042074.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83693471 83696658 + Trmu protein_coding processed_transcript MGP_BALBcJ_T0042075.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83694015 83696325 + Trmu protein_coding retained_intron MGP_BALBcJ_T0042076.1 MGP_BALBcJ_G0022164.1 mouse_genomes_project 15 83694145 83696660 + Trmu protein_coding retained_intron MGP_BALBcJ_T0003573.1 MGP_BALBcJ_G0003242.1 mouse_genomes_project 15 2015692 2028734 - Gm15938 antisense antisense MGP_BALBcJ_T0041232.1 MGP_BALBcJ_G0021922.1 mouse_genomes_project 15 72910627 72919228 + MGP_BALBcJ_P0041232 Zfp41 protein_coding protein_coding MGP_BALBcJ_T0041233.1 MGP_BALBcJ_G0021922.1 mouse_genomes_project 15 72910632 72919221 + MGP_BALBcJ_P0041233 Zfp41 protein_coding protein_coding MGP_BALBcJ_T0041234.1 MGP_BALBcJ_G0021922.1 mouse_genomes_project 15 72910668 72912584 + MGP_BALBcJ_P0041234 Zfp41 protein_coding protein_coding MGP_BALBcJ_T0041235.1 MGP_BALBcJ_G0021922.1 mouse_genomes_project 15 72915650 72917758 + Zfp41 protein_coding processed_transcript MGP_BALBcJ_T0017442.1 MGP_BALBcJ_G0015247.1 mouse_genomes_project 15 89733611 89757413 + processed_transcript processed_transcript MGP_BALBcJ_T0017443.1 MGP_BALBcJ_G0015247.1 mouse_genomes_project 15 89740829 89771104 + processed_transcript processed_transcript MGP_BALBcJ_T0042602.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98923030 98992752 + MGP_BALBcJ_P0042602 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042603.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98923030 98992752 + MGP_BALBcJ_P0042603 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042604.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98923817 99069243 + MGP_BALBcJ_P0042604 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042605.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98923833 98992752 + MGP_BALBcJ_P0042605 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042606.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98923855 99104246 + MGP_BALBcJ_P0042606 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042607.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98924622 99104255 + MGP_BALBcJ_P0042607 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042608.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98924663 99100017 + MGP_BALBcJ_P0042608 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042609.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98924670 99099934 + MGP_BALBcJ_P0042609 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042610.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98925138 98992752 + MGP_BALBcJ_P0042610 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042611.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98989853 98997444 + MGP_BALBcJ_P0042611 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042612.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98992695 99104246 + MGP_BALBcJ_P0042612 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042613.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98992730 98997067 + MGP_BALBcJ_P0042613 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042614.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 98992749 99099009 + MGP_BALBcJ_P0042614 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042615.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99011851 99017813 + MGP_BALBcJ_P0042615 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042616.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99013263 99016136 + Scn8a protein_coding retained_intron MGP_BALBcJ_T0042617.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99013298 99015983 + Scn8a protein_coding retained_intron MGP_BALBcJ_T0042618.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99013427 99060281 + MGP_BALBcJ_P0042618 Scn8a protein_coding protein_coding MGP_BALBcJ_T0042619.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99025011 99026652 + Scn8a protein_coding retained_intron MGP_BALBcJ_T0042620.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99026536 99032156 + Scn8a protein_coding retained_intron MGP_BALBcJ_T0042621.1 MGP_BALBcJ_G0022328.1 mouse_genomes_project 15 99074270 99088104 + Scn8a protein_coding processed_transcript MGP_BALBcJ_T0099450.1 MGP_BALBcJ_G0037486.1 mouse_genomes_project 15 8996579 8996688 - Gm25713 snRNA snRNA MGP_BALBcJ_T0041647.1 MGP_BALBcJ_G0022037.1 mouse_genomes_project 15 76763458 76791285 - MGP_BALBcJ_P0041647 Baiap2l2 protein_coding protein_coding MGP_BALBcJ_T0041648.1 MGP_BALBcJ_G0022037.1 mouse_genomes_project 15 76763459 76791190 - MGP_BALBcJ_P0041648 Baiap2l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041649.1 MGP_BALBcJ_G0022037.1 mouse_genomes_project 15 76763595 76765028 - Baiap2l2 protein_coding processed_transcript MGP_BALBcJ_T0041650.1 MGP_BALBcJ_G0022037.1 mouse_genomes_project 15 76765392 76766974 - Baiap2l2 protein_coding processed_transcript MGP_BALBcJ_T0041651.1 MGP_BALBcJ_G0022037.1 mouse_genomes_project 15 76775860 76791241 - MGP_BALBcJ_P0041651 Baiap2l2 protein_coding protein_coding MGP_BALBcJ_T0042239.1 MGP_BALBcJ_G0022209.1 mouse_genomes_project 15 88317279 88495968 - MGP_BALBcJ_P0042239 Cpne8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042240.1 MGP_BALBcJ_G0022209.1 mouse_genomes_project 15 88317280 88496029 - MGP_BALBcJ_P0042240 Cpne8 protein_coding protein_coding MGP_BALBcJ_T0042241.1 MGP_BALBcJ_G0022209.1 mouse_genomes_project 15 88464368 88495973 - Cpne8 protein_coding retained_intron MGP_BALBcJ_T0042683.1 MGP_BALBcJ_G0022368.1 mouse_genomes_project 15 100279761 100293427 - MGP_BALBcJ_P0042683 Csad protein_coding protein_coding MGP_BALBcJ_T0041070.1 MGP_BALBcJ_G0021874.1 mouse_genomes_project 15 63969217 64027047 - MGP_BALBcJ_P0041070 Sla protein_coding protein_coding MGP_BALBcJ_T0041071.1 MGP_BALBcJ_G0021874.1 mouse_genomes_project 15 63969262 64007848 - MGP_BALBcJ_P0041071 Sla protein_coding protein_coding MGP_BALBcJ_T0041072.1 MGP_BALBcJ_G0021874.1 mouse_genomes_project 15 63970476 63996087 - MGP_BALBcJ_P0041072 Sla protein_coding protein_coding MGP_BALBcJ_T0041073.1 MGP_BALBcJ_G0021874.1 mouse_genomes_project 15 63970940 64027230 - MGP_BALBcJ_P0041073 Sla protein_coding protein_coding MGP_BALBcJ_T0041074.1 MGP_BALBcJ_G0021874.1 mouse_genomes_project 15 63974118 63998244 - Sla protein_coding retained_intron MGP_BALBcJ_T0010025.1 MGP_BALBcJ_G0008150.1 mouse_genomes_project 15 43487601 43487663 - Gm23562 miRNA miRNA MGP_BALBcJ_T0041455.1 MGP_BALBcJ_G0021975.1 mouse_genomes_project 15 74014592 74017290 + MGP_BALBcJ_P0041455 Mfsd3 protein_coding protein_coding MGP_BALBcJ_T0040946.1 MGP_BALBcJ_G0021829.1 mouse_genomes_project 15 55012089 55032964 - MGP_BALBcJ_P0040946 Derl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0013044.1 MGP_BALBcJ_G0011141.1 mouse_genomes_project 15 43028969 43030649 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010045.1 MGP_BALBcJ_G0008170.1 mouse_genomes_project 15 78192901 78192965 + Mir6957 miRNA miRNA MGP_BALBcJ_T0011374.1 MGP_BALBcJ_G0009499.1 mouse_genomes_project 15 91101015 91101353 + Gm24447 misc_RNA misc_RNA MGP_BALBcJ_T0017430.1 MGP_BALBcJ_G0015240.1 mouse_genomes_project 15 74724427 74726328 - processed_transcript processed_transcript MGP_BALBcJ_T0100765.1 MGP_BALBcJ_G0038801.1 mouse_genomes_project 15 77613208 77613302 - Snord83b snoRNA snoRNA MGP_BALBcJ_T0040957.1 MGP_BALBcJ_G0021832.1 mouse_genomes_project 15 55159029 55172846 - MGP_BALBcJ_P0040957 protein_coding unknown_likely_coding MGP_BALBcJ_T0040958.1 MGP_BALBcJ_G0021832.1 mouse_genomes_project 15 55160786 55166412 - protein_coding processed_transcript MGP_BALBcJ_T0040960.1 MGP_BALBcJ_G0021832.1 mouse_genomes_project 15 55167328 55172707 - MGP_BALBcJ_P0040960 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040961.1 MGP_BALBcJ_G0021832.1 mouse_genomes_project 15 55169472 55172842 - MGP_BALBcJ_P0040961 protein_coding protein_coding MGP_BALBcJ_T0013074.1 MGP_BALBcJ_G0011171.1 mouse_genomes_project 15 89376261 89377704 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042833.1 MGP_BALBcJ_G0022411.1 mouse_genomes_project 15 101658412 101666818 - MGP_BALBcJ_P0042833 Ppp1r1a protein_coding protein_coding MGP_BALBcJ_T0041754.1 MGP_BALBcJ_G0022064.1 mouse_genomes_project 15 77794356 77796713 + MGP_BALBcJ_P0041754 Atf4 protein_coding protein_coding MGP_BALBcJ_T0100770.1 MGP_BALBcJ_G0038806.1 mouse_genomes_project 15 96036939 96037068 + Gm25668 snoRNA snoRNA MGP_BALBcJ_T0040868.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 44655931 45926913 - MGP_BALBcJ_P0040868 Csmd3 protein_coding protein_coding MGP_BALBcJ_T0040869.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 44655932 45926969 - MGP_BALBcJ_P0040869 Csmd3 protein_coding protein_coding MGP_BALBcJ_T0040870.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 44656016 45927043 - MGP_BALBcJ_P0040870 Csmd3 protein_coding protein_coding MGP_BALBcJ_T0040871.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 44657444 45095712 - MGP_BALBcJ_P0040871 Csmd3 protein_coding protein_coding MGP_BALBcJ_T0040872.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 44657447 44691097 - Csmd3 protein_coding retained_intron MGP_BALBcJ_T0040873.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 44705669 44710456 - Csmd3 protein_coding retained_intron MGP_BALBcJ_T0040874.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 45041274 45054947 - Csmd3 protein_coding retained_intron MGP_BALBcJ_T0040875.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 45375631 45926969 - Csmd3 protein_coding processed_transcript MGP_BALBcJ_T0040876.1 MGP_BALBcJ_G0021802.1 mouse_genomes_project 15 45412893 45926969 - Csmd3 protein_coding retained_intron MGP_BALBcJ_T0040906.1 MGP_BALBcJ_G0021816.1 mouse_genomes_project 15 51893701 51902306 + MGP_BALBcJ_P0040906 Nov protein_coding protein_coding MGP_BALBcJ_T0040682.1 MGP_BALBcJ_G0021730.1 mouse_genomes_project 15 28318774 28319191 + MGP_BALBcJ_P0040682 Fam136b-ps protein_coding protein_coding MGP_BALBcJ_T0040863.1 MGP_BALBcJ_G0021799.1 mouse_genomes_project 15 41673727 41694884 + MGP_BALBcJ_P0040863 Ebag9 protein_coding unknown_likely_coding MGP_BALBcJ_T0041153.1 MGP_BALBcJ_G0021894.1 mouse_genomes_project 15 71738295 71766804 - MGP_BALBcJ_P0041153 Mroh4 protein_coding protein_coding MGP_BALBcJ_T0041154.1 MGP_BALBcJ_G0021894.1 mouse_genomes_project 15 71738295 71765300 - MGP_BALBcJ_P0041154 Mroh4 protein_coding protein_coding MGP_BALBcJ_T0041155.1 MGP_BALBcJ_G0021894.1 mouse_genomes_project 15 71738669 71744279 - MGP_BALBcJ_P0041155 Mroh4 protein_coding protein_coding MGP_BALBcJ_T0041156.1 MGP_BALBcJ_G0021894.1 mouse_genomes_project 15 71738681 71740495 - Mroh4 protein_coding retained_intron MGP_BALBcJ_T0041157.1 MGP_BALBcJ_G0021894.1 mouse_genomes_project 15 71748404 71758780 - MGP_BALBcJ_P0041157 Mroh4 protein_coding protein_coding MGP_BALBcJ_T0041158.1 MGP_BALBcJ_G0021894.1 mouse_genomes_project 15 71762015 71766749 - Mroh4 protein_coding processed_transcript MGP_BALBcJ_T0041378.1 MGP_BALBcJ_G0021955.1 mouse_genomes_project 15 73672372 73679426 + MGP_BALBcJ_P0041378 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0041442.1 MGP_BALBcJ_G0021971.1 mouse_genomes_project 15 73973661 73980993 + MGP_BALBcJ_P0041442 Kifc2 protein_coding protein_coding MGP_BALBcJ_T0099479.1 MGP_BALBcJ_G0037515.1 mouse_genomes_project 15 73339244 73339402 + Gm23027 snRNA snRNA MGP_BALBcJ_T0099462.1 MGP_BALBcJ_G0037498.1 mouse_genomes_project 15 45690131 45690264 + Gm25007 snRNA snRNA MGP_BALBcJ_T0041619.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76616807 76622386 - 1700088E04Rik protein_coding processed_transcript MGP_BALBcJ_T0041620.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622124 76629010 - MGP_BALBcJ_P0041620 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041621.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622124 76629062 - MGP_BALBcJ_P0041621 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041622.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622130 76629076 - MGP_BALBcJ_P0041622 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041623.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622461 76629053 - MGP_BALBcJ_P0041623 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041624.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622478 76624187 - 1700088E04Rik protein_coding processed_transcript MGP_BALBcJ_T0041625.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622486 76629057 - MGP_BALBcJ_P0041625 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041626.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622525 76629028 - MGP_BALBcJ_P0041626 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041627.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76622551 76629005 - MGP_BALBcJ_P0041627 1700088E04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041628.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76624609 76629026 - MGP_BALBcJ_P0041628 1700088E04Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041629.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76624897 76627106 - MGP_BALBcJ_P0041629 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041630.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76624900 76629076 - MGP_BALBcJ_P0041630 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0041631.1 MGP_BALBcJ_G0022032.1 mouse_genomes_project 15 76624902 76628801 - MGP_BALBcJ_P0041631 1700088E04Rik protein_coding protein_coding MGP_BALBcJ_T0013030.1 MGP_BALBcJ_G0011127.1 mouse_genomes_project 15 7412856 7414068 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041565.1 MGP_BALBcJ_G0022012.1 mouse_genomes_project 15 75952509 75967021 - MGP_BALBcJ_P0041565 Il2rb protein_coding protein_coding MGP_BALBcJ_T0041566.1 MGP_BALBcJ_G0022012.1 mouse_genomes_project 15 75953281 75965713 - MGP_BALBcJ_P0041566 Il2rb protein_coding protein_coding MGP_BALBcJ_T0041592.1 MGP_BALBcJ_G0022025.1 mouse_genomes_project 15 76416449 76425578 + MGP_BALBcJ_P0041592 Nol12 protein_coding protein_coding MGP_BALBcJ_T0041593.1 MGP_BALBcJ_G0022025.1 mouse_genomes_project 15 76416467 76422504 + MGP_BALBcJ_P0041593 Nol12 protein_coding protein_coding MGP_BALBcJ_T0041594.1 MGP_BALBcJ_G0022025.1 mouse_genomes_project 15 76416511 76422436 + MGP_BALBcJ_P0041594 Nol12 protein_coding protein_coding MGP_BALBcJ_T0041595.1 MGP_BALBcJ_G0022025.1 mouse_genomes_project 15 76416702 76419402 + MGP_BALBcJ_P0041595 Nol12 protein_coding protein_coding MGP_BALBcJ_T0041596.1 MGP_BALBcJ_G0022025.1 mouse_genomes_project 15 76416724 76418100 + MGP_BALBcJ_P0041596 Nol12 protein_coding protein_coding MGP_BALBcJ_T0041063.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63859822 64046437 + MGP_BALBcJ_P0041063 Tg protein_coding protein_coding MGP_BALBcJ_T0041064.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63877769 64046323 + MGP_BALBcJ_P0041064 Tg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041065.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63890276 63904490 + Tg protein_coding processed_transcript MGP_BALBcJ_T0041066.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63894294 64046323 + MGP_BALBcJ_P0041066 Tg protein_coding protein_coding MGP_BALBcJ_T0041067.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63905243 63914517 + Tg protein_coding processed_transcript MGP_BALBcJ_T0041068.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63905885 63918901 + Tg protein_coding processed_transcript MGP_BALBcJ_T0041069.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63925300 64046437 + MGP_BALBcJ_P0041069 Tg protein_coding protein_coding MGP_BALBcJ_T0041075.1 MGP_BALBcJ_G0021873.1 mouse_genomes_project 15 63993243 64046437 + Tg protein_coding processed_transcript MGP_BALBcJ_T0040854.1 MGP_BALBcJ_G0021793.1 mouse_genomes_project 15 40530549 40576580 + MGP_BALBcJ_P0040854 Emc2 protein_coding protein_coding MGP_BALBcJ_T0041009.1 MGP_BALBcJ_G0021857.1 mouse_genomes_project 15 60913486 61121434 - MGP_BALBcJ_P0041009 Gsdmc protein_coding protein_coding MGP_BALBcJ_T0041010.1 MGP_BALBcJ_G0021857.1 mouse_genomes_project 15 60953338 60972475 - MGP_BALBcJ_P0041010 Gsdmc protein_coding protein_coding MGP_BALBcJ_T0041182.1 MGP_BALBcJ_G0021908.1 mouse_genomes_project 15 71973697 71995102 - MGP_BALBcJ_P0041182 Cyp11b1 protein_coding protein_coding MGP_BALBcJ_T0099464.1 MGP_BALBcJ_G0037500.1 mouse_genomes_project 15 46654859 46654965 + Gm23848 snRNA snRNA MGP_BALBcJ_T0042310.1 MGP_BALBcJ_G0022232.1 mouse_genomes_project 15 93763561 93769071 - MGP_BALBcJ_P0042310 Gm17546 protein_coding protein_coding MGP_BALBcJ_T0041498.1 MGP_BALBcJ_G0021988.1 mouse_genomes_project 15 74387426 74617390 - MGP_BALBcJ_P0041498 Rbfox2 protein_coding protein_coding MGP_BALBcJ_T0041499.1 MGP_BALBcJ_G0021988.1 mouse_genomes_project 15 74387427 74462418 - MGP_BALBcJ_P0041499 Rbfox2 protein_coding protein_coding MGP_BALBcJ_T0041500.1 MGP_BALBcJ_G0021988.1 mouse_genomes_project 15 74387427 74617390 - MGP_BALBcJ_P0041500 Rbfox2 protein_coding protein_coding MGP_BALBcJ_T0041501.1 MGP_BALBcJ_G0021988.1 mouse_genomes_project 15 74387427 74462418 - MGP_BALBcJ_P0041501 Rbfox2 protein_coding protein_coding MGP_BALBcJ_T0042459.1 MGP_BALBcJ_G0022283.1 mouse_genomes_project 15 96995222 96995537 + MGP_BALBcJ_P0042459 Gm8973 protein_coding protein_coding MGP_BALBcJ_T0013048.1 MGP_BALBcJ_G0011145.1 mouse_genomes_project 15 51912796 51913778 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041693.1 MGP_BALBcJ_G0022050.1 mouse_genomes_project 15 77234979 77259315 + MGP_BALBcJ_P0041693 Gtpbp1 protein_coding protein_coding MGP_BALBcJ_T0010017.1 MGP_BALBcJ_G0008142.1 mouse_genomes_project 15 33330076 33330195 - Mir8097 miRNA miRNA MGP_BALBcJ_T0003600.1 MGP_BALBcJ_G0003262.1 mouse_genomes_project 15 78992282 78995911 - Gm17025 antisense antisense MGP_BALBcJ_T0040649.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22710185 22902027 + MGP_BALBcJ_P0040649 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040650.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22710203 22868103 + MGP_BALBcJ_P0040650 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040651.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22710209 22790073 + Myo10 protein_coding retained_intron MGP_BALBcJ_T0040652.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22762224 22811854 + Myo10 protein_coding processed_transcript MGP_BALBcJ_T0040653.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22801985 22811905 + Myo10 protein_coding retained_intron MGP_BALBcJ_T0040654.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22830282 22869533 + MGP_BALBcJ_P0040654 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040655.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22840955 22868113 + MGP_BALBcJ_P0040655 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040656.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22846737 22864062 + MGP_BALBcJ_P0040656 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040657.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22846757 22868748 + MGP_BALBcJ_P0040657 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040658.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22856525 22864311 + MGP_BALBcJ_P0040658 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040659.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22861952 22869396 + MGP_BALBcJ_P0040659 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040660.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22862271 22902033 + MGP_BALBcJ_P0040660 Myo10 protein_coding protein_coding MGP_BALBcJ_T0040661.1 MGP_BALBcJ_G0021717.1 mouse_genomes_project 15 22868528 22869707 + Myo10 protein_coding retained_intron MGP_BALBcJ_T0041175.1 MGP_BALBcJ_G0021905.1 mouse_genomes_project 15 71931626 71934670 - MGP_BALBcJ_P0041175 Ly6k protein_coding protein_coding MGP_BALBcJ_T0041176.1 MGP_BALBcJ_G0021905.1 mouse_genomes_project 15 71931626 71934217 - MGP_BALBcJ_P0041176 Ly6k protein_coding protein_coding MGP_BALBcJ_T0099477.1 MGP_BALBcJ_G0037513.1 mouse_genomes_project 15 69837892 69837959 - Gm28020 snRNA snRNA MGP_BALBcJ_T0000938.1 MGP_BALBcJ_G0000869.1 mouse_genomes_project 15 90342489 90345375 + TEC TEC MGP_BALBcJ_T0040706.1 MGP_BALBcJ_G0021741.1 mouse_genomes_project 15 30756301 30760302 - MGP_BALBcJ_P0040706 Tspyl5 protein_coding protein_coding MGP_BALBcJ_T0040640.1 MGP_BALBcJ_G0021713.1 mouse_genomes_project 15 19627821 20470337 + MGP_BALBcJ_P0040640 Cdh18 protein_coding protein_coding MGP_BALBcJ_T0040641.1 MGP_BALBcJ_G0021713.1 mouse_genomes_project 15 20107574 20256318 + Cdh18 protein_coding retained_intron MGP_BALBcJ_T0040642.1 MGP_BALBcJ_G0021713.1 mouse_genomes_project 15 20107582 20517488 + Cdh18 protein_coding retained_intron MGP_BALBcJ_T0040643.1 MGP_BALBcJ_G0021713.1 mouse_genomes_project 15 20107582 20547490 + MGP_BALBcJ_P0040643 Cdh18 protein_coding protein_coding MGP_BALBcJ_T0040644.1 MGP_BALBcJ_G0021713.1 mouse_genomes_project 15 20254878 20547137 + MGP_BALBcJ_P0040644 Cdh18 protein_coding protein_coding MGP_BALBcJ_T0040645.1 MGP_BALBcJ_G0021713.1 mouse_genomes_project 15 20255040 20547101 + MGP_BALBcJ_P0040645 Cdh18 protein_coding protein_coding MGP_BALBcJ_T0042326.1 MGP_BALBcJ_G0022241.1 mouse_genomes_project 15 95639409 95671181 - MGP_BALBcJ_P0042326 Rpap3 protein_coding protein_coding MGP_BALBcJ_T0040959.1 MGP_BALBcJ_G0021833.1 mouse_genomes_project 15 55166759 55215201 - MGP_BALBcJ_P0040959 Gm29394 protein_coding protein_coding MGP_BALBcJ_T0040962.1 MGP_BALBcJ_G0021833.1 mouse_genomes_project 15 55169475 55214983 - MGP_BALBcJ_P0040962 Gm29394 protein_coding protein_coding MGP_BALBcJ_T0040966.1 MGP_BALBcJ_G0021833.1 mouse_genomes_project 15 55187123 55214959 - MGP_BALBcJ_P0040966 Gm29394 protein_coding protein_coding MGP_BALBcJ_T0040967.1 MGP_BALBcJ_G0021833.1 mouse_genomes_project 15 55187242 55214982 - MGP_BALBcJ_P0040967 Gm29394 protein_coding protein_coding MGP_BALBcJ_T0042304.1 MGP_BALBcJ_G0022228.1 mouse_genomes_project 15 93129384 93440675 - MGP_BALBcJ_P0042304 Nell2 protein_coding protein_coding MGP_BALBcJ_T0042305.1 MGP_BALBcJ_G0022228.1 mouse_genomes_project 15 93129863 93440221 - MGP_BALBcJ_P0042305 Nell2 protein_coding protein_coding MGP_BALBcJ_T0042468.1 MGP_BALBcJ_G0022290.1 mouse_genomes_project 15 97236598 97245179 - MGP_BALBcJ_P0042468 Mcrs1 protein_coding protein_coding MGP_BALBcJ_T0041810.1 MGP_BALBcJ_G0022078.1 mouse_genomes_project 15 78976870 79008082 + Xpnpep3 protein_coding retained_intron MGP_BALBcJ_T0041811.1 MGP_BALBcJ_G0022078.1 mouse_genomes_project 15 78976890 78993032 + Xpnpep3 protein_coding retained_intron MGP_BALBcJ_T0041812.1 MGP_BALBcJ_G0022078.1 mouse_genomes_project 15 78976916 79038883 + MGP_BALBcJ_P0041812 Xpnpep3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041813.1 MGP_BALBcJ_G0022078.1 mouse_genomes_project 15 78976917 79023957 + MGP_BALBcJ_P0041813 Xpnpep3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041814.1 MGP_BALBcJ_G0022078.1 mouse_genomes_project 15 78976944 79043307 + MGP_BALBcJ_P0041814 Xpnpep3 protein_coding protein_coding MGP_BALBcJ_T0041815.1 MGP_BALBcJ_G0022078.1 mouse_genomes_project 15 78976953 79007666 + Xpnpep3 protein_coding processed_transcript MGP_BALBcJ_T0042307.1 MGP_BALBcJ_G0022230.1 mouse_genomes_project 15 93726977 93730764 - MGP_BALBcJ_P0042307 A130051J06Rik protein_coding protein_coding MGP_BALBcJ_T0099491.1 MGP_BALBcJ_G0037527.1 mouse_genomes_project 15 87898434 87898541 - Gm24415 snRNA snRNA MGP_BALBcJ_T0040788.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34488618 34918416 - MGP_BALBcJ_P0040788 Ncald protein_coding protein_coding MGP_BALBcJ_T0040789.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34488618 34918849 - MGP_BALBcJ_P0040789 Ncald protein_coding protein_coding MGP_BALBcJ_T0040790.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34488661 34581965 - MGP_BALBcJ_P0040790 Ncald protein_coding protein_coding MGP_BALBcJ_T0040791.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34488710 34581954 - MGP_BALBcJ_P0040791 Ncald protein_coding protein_coding MGP_BALBcJ_T0040792.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34491067 34581146 - MGP_BALBcJ_P0040792 Ncald protein_coding protein_coding MGP_BALBcJ_T0040793.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34491331 34857084 - MGP_BALBcJ_P0040793 Ncald protein_coding protein_coding MGP_BALBcJ_T0040794.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34494554 34918416 - MGP_BALBcJ_P0040794 Ncald protein_coding protein_coding MGP_BALBcJ_T0040795.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34501726 34581937 - Ncald protein_coding processed_transcript MGP_BALBcJ_T0040796.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34517974 34918986 - MGP_BALBcJ_P0040796 Ncald protein_coding protein_coding MGP_BALBcJ_T0040798.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34553760 34856785 - Ncald protein_coding processed_transcript MGP_BALBcJ_T0040799.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34741474 34857084 - Ncald protein_coding processed_transcript MGP_BALBcJ_T0040800.1 MGP_BALBcJ_G0021769.1 mouse_genomes_project 15 34742841 34918655 - Ncald protein_coding processed_transcript MGP_BALBcJ_T0041846.1 MGP_BALBcJ_G0022086.1 mouse_genomes_project 15 79345697 79398471 + MGP_BALBcJ_P0041846 Zc3h7b protein_coding protein_coding MGP_BALBcJ_T0041429.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73934047 73937961 - MGP_BALBcJ_P0041429 Tonsl protein_coding protein_coding MGP_BALBcJ_T0041430.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73937935 73941713 - MGP_BALBcJ_P0041430 Tonsl protein_coding protein_coding MGP_BALBcJ_T0041431.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73938170 73952831 - MGP_BALBcJ_P0041431 Tonsl protein_coding protein_coding MGP_BALBcJ_T0041432.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73938171 73941794 - Tonsl protein_coding retained_intron MGP_BALBcJ_T0041433.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73945181 73946085 - MGP_BALBcJ_P0041433 Tonsl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041434.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73945214 73952802 - MGP_BALBcJ_P0041434 Tonsl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041435.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73950059 73951152 - Tonsl protein_coding retained_intron MGP_BALBcJ_T0041436.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73951429 73952511 - Tonsl protein_coding retained_intron MGP_BALBcJ_T0041437.1 MGP_BALBcJ_G0021969.1 mouse_genomes_project 15 73951731 73952713 - MGP_BALBcJ_P0041437 Tonsl protein_coding protein_coding MGP_BALBcJ_T0041935.1 MGP_BALBcJ_G0022121.1 mouse_genomes_project 15 80741487 80766678 - MGP_BALBcJ_P0041935 Nfam1 protein_coding protein_coding MGP_BALBcJ_T0041936.1 MGP_BALBcJ_G0022121.1 mouse_genomes_project 15 80743502 80776952 - MGP_BALBcJ_P0041936 Nfam1 protein_coding protein_coding MGP_BALBcJ_T0017405.1 MGP_BALBcJ_G0015228.1 mouse_genomes_project 15 4219593 4233084 + Gm16029 processed_transcript processed_transcript MGP_BALBcJ_T0102261.1 MGP_BALBcJ_G0040077.1 mouse_genomes_project 15 80494908 80499088 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042101.1 MGP_BALBcJ_G0022174.1 mouse_genomes_project 15 86642298 86649343 + MGP_BALBcJ_P0042101 Creld2 protein_coding protein_coding MGP_BALBcJ_T0041506.1 MGP_BALBcJ_G0021990.1 mouse_genomes_project 15 74891080 74896019 + protein_coding processed_transcript MGP_BALBcJ_T0041507.1 MGP_BALBcJ_G0021990.1 mouse_genomes_project 15 74891080 74896968 + MGP_BALBcJ_P0041507 protein_coding protein_coding MGP_BALBcJ_T0013050.1 MGP_BALBcJ_G0011147.1 mouse_genomes_project 15 57163408 57164415 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042265.1 MGP_BALBcJ_G0022216.1 mouse_genomes_project 15 89911274 90111770 + Cntn1 protein_coding retained_intron MGP_BALBcJ_T0042266.1 MGP_BALBcJ_G0022216.1 mouse_genomes_project 15 89911274 90203872 + MGP_BALBcJ_P0042266 Cntn1 protein_coding protein_coding MGP_BALBcJ_T0042267.1 MGP_BALBcJ_G0022216.1 mouse_genomes_project 15 89988135 90203859 + MGP_BALBcJ_P0042267 Cntn1 protein_coding protein_coding MGP_BALBcJ_T0042268.1 MGP_BALBcJ_G0022216.1 mouse_genomes_project 15 90021329 90202020 + MGP_BALBcJ_P0042268 Cntn1 protein_coding protein_coding MGP_BALBcJ_T0041399.1 MGP_BALBcJ_G0021960.1 mouse_genomes_project 15 73774188 73776219 + MGP_BALBcJ_P0041399 Scx protein_coding protein_coding MGP_BALBcJ_T0040571.1 MGP_BALBcJ_G0021690.1 mouse_genomes_project 15 7336284 7343956 + MGP_BALBcJ_P0040571 Rad1 protein_coding protein_coding MGP_BALBcJ_T0040572.1 MGP_BALBcJ_G0021690.1 mouse_genomes_project 15 7336315 7343951 + Rad1 protein_coding retained_intron MGP_BALBcJ_T0040573.1 MGP_BALBcJ_G0021690.1 mouse_genomes_project 15 7336335 7349129 + MGP_BALBcJ_P0040573 Rad1 protein_coding protein_coding MGP_BALBcJ_T0040574.1 MGP_BALBcJ_G0021690.1 mouse_genomes_project 15 7336346 7340614 + MGP_BALBcJ_P0040574 Rad1 protein_coding protein_coding MGP_BALBcJ_T0040575.1 MGP_BALBcJ_G0021690.1 mouse_genomes_project 15 7336741 7343630 + MGP_BALBcJ_P0040575 Rad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040576.1 MGP_BALBcJ_G0021690.1 mouse_genomes_project 15 7336875 7343941 + MGP_BALBcJ_P0040576 Rad1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003617.1 MGP_BALBcJ_G0003277.1 mouse_genomes_project 15 97937299 97957803 + Gm21917 antisense antisense MGP_BALBcJ_T0003618.1 MGP_BALBcJ_G0003277.1 mouse_genomes_project 15 97937299 97939285 + Gm21917 antisense antisense MGP_BALBcJ_T0003619.1 MGP_BALBcJ_G0003277.1 mouse_genomes_project 15 97940391 97958252 + Gm21917 antisense antisense MGP_BALBcJ_T0010008.1 MGP_BALBcJ_G0008133.1 mouse_genomes_project 15 9683628 9683768 + miRNA miRNA MGP_BALBcJ_T0041276.1 MGP_BALBcJ_G0021937.1 mouse_genomes_project 15 73296330 73298386 + Mapk15 protein_coding processed_transcript MGP_BALBcJ_T0041277.1 MGP_BALBcJ_G0021937.1 mouse_genomes_project 15 73296330 73301714 + MGP_BALBcJ_P0041277 Mapk15 protein_coding protein_coding MGP_BALBcJ_T0041278.1 MGP_BALBcJ_G0021937.1 mouse_genomes_project 15 73298500 73301714 + Mapk15 protein_coding retained_intron MGP_BALBcJ_T0041279.1 MGP_BALBcJ_G0021937.1 mouse_genomes_project 15 73299274 73301714 + Mapk15 protein_coding processed_transcript MGP_BALBcJ_T0041038.1 MGP_BALBcJ_G0021865.1 mouse_genomes_project 15 62204920 62239720 - MGP_BALBcJ_P0041038 Gm21961 protein_coding protein_coding MGP_BALBcJ_T0040996.1 MGP_BALBcJ_G0021852.1 mouse_genomes_project 15 56808794 56817007 + MGP_BALBcJ_P0040996 Trib1 protein_coding protein_coding MGP_BALBcJ_T0040997.1 MGP_BALBcJ_G0021852.1 mouse_genomes_project 15 56809097 56814146 + MGP_BALBcJ_P0040997 Trib1 protein_coding protein_coding MGP_BALBcJ_T0040858.1 MGP_BALBcJ_G0021796.1 mouse_genomes_project 15 41430851 41484707 - MGP_BALBcJ_P0040858 Nudcd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0040859.1 MGP_BALBcJ_G0021796.1 mouse_genomes_project 15 41430854 41485158 - MGP_BALBcJ_P0040859 Nudcd1 protein_coding protein_coding MGP_BALBcJ_T0017406.1 MGP_BALBcJ_G0015229.1 mouse_genomes_project 15 15723424 15848966 - C030047K22Rik processed_transcript processed_transcript MGP_BALBcJ_T0040698.1 MGP_BALBcJ_G0021736.1 mouse_genomes_project 15 28663292 28683034 + Fam173b protein_coding processed_transcript MGP_BALBcJ_T0040699.1 MGP_BALBcJ_G0021736.1 mouse_genomes_project 15 28663558 28679373 + MGP_BALBcJ_P0040699 Fam173b protein_coding protein_coding MGP_BALBcJ_T0040700.1 MGP_BALBcJ_G0021736.1 mouse_genomes_project 15 28663558 28680447 + MGP_BALBcJ_P0040700 Fam173b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042807.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101377575 101384838 - MGP_BALBcJ_P0042807 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042808.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101377580 101380865 - MGP_BALBcJ_P0042808 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042809.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101377580 101380916 - MGP_BALBcJ_P0042809 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042810.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101377583 101381076 - MGP_BALBcJ_P0042810 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042811.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101377638 101380915 - MGP_BALBcJ_P0042811 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042812.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101378318 101382552 - MGP_BALBcJ_P0042812 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042813.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101378370 101383461 - MGP_BALBcJ_P0042813 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042814.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101378432 101381087 - MGP_BALBcJ_P0042814 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042815.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101378602 101382210 - MGP_BALBcJ_P0042815 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0042816.1 MGP_BALBcJ_G0022402.1 mouse_genomes_project 15 101378712 101387800 - MGP_BALBcJ_P0042816 Nfe2 protein_coding protein_coding MGP_BALBcJ_T0006761.1 MGP_BALBcJ_G0005573.1 mouse_genomes_project 15 75406385 75411838 + Gm17638 lincRNA lincRNA MGP_BALBcJ_T0006742.1 MGP_BALBcJ_G0005566.1 mouse_genomes_project 15 43370404 43420891 + 1700022A22Rik lincRNA lincRNA MGP_BALBcJ_T0006743.1 MGP_BALBcJ_G0005566.1 mouse_genomes_project 15 43370416 43402739 + 1700022A22Rik lincRNA lincRNA MGP_BALBcJ_T0006744.1 MGP_BALBcJ_G0005566.1 mouse_genomes_project 15 43370430 43420940 + 1700022A22Rik lincRNA lincRNA MGP_BALBcJ_T0013026.1 MGP_BALBcJ_G0011123.1 mouse_genomes_project 15 5378711 5379011 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006720.1 MGP_BALBcJ_G0005548.1 mouse_genomes_project 15 7569503 7631746 + 4930556M19Rik lincRNA lincRNA MGP_BALBcJ_T0041896.1 MGP_BALBcJ_G0022099.1 mouse_genomes_project 15 79681292 79743870 + MGP_BALBcJ_P0041896 Mei1 protein_coding protein_coding MGP_BALBcJ_T0041897.1 MGP_BALBcJ_G0022099.1 mouse_genomes_project 15 79681449 79743870 + MGP_BALBcJ_P0041897 Mei1 protein_coding unknown_likely_coding MGP_BALBcJ_T0041898.1 MGP_BALBcJ_G0022099.1 mouse_genomes_project 15 79695387 79744020 + MGP_BALBcJ_P0041898 Mei1 protein_coding protein_coding MGP_BALBcJ_T0041899.1 MGP_BALBcJ_G0022099.1 mouse_genomes_project 15 79695399 79744022 + MGP_BALBcJ_P0041899 Mei1 protein_coding protein_coding MGP_BALBcJ_T0041900.1 MGP_BALBcJ_G0022099.1 mouse_genomes_project 15 79696100 79743947 + MGP_BALBcJ_P0041900 Mei1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042325.1 MGP_BALBcJ_G0022240.1 mouse_genomes_project 15 95203917 95347938 + MGP_BALBcJ_P0042325 Pced1b protein_coding protein_coding MGP_BALBcJ_T0042650.1 MGP_BALBcJ_G0022342.1 mouse_genomes_project 15 99558834 99562613 - Krt83 protein_coding retained_intron MGP_BALBcJ_T0042651.1 MGP_BALBcJ_G0022342.1 mouse_genomes_project 15 99558834 99566538 - MGP_BALBcJ_P0042651 Krt83 protein_coding protein_coding MGP_BALBcJ_T0041343.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73645373 73649050 + MGP_BALBcJ_P0041343 Gpaa1 protein_coding protein_coding MGP_BALBcJ_T0041344.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73645486 73649041 + MGP_BALBcJ_P0041344 Gpaa1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041345.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73645487 73649046 + MGP_BALBcJ_P0041345 Gpaa1 protein_coding protein_coding MGP_BALBcJ_T0041346.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73645492 73646957 + Gpaa1 protein_coding retained_intron MGP_BALBcJ_T0041347.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73645655 73646629 + MGP_BALBcJ_P0041347 Gpaa1 protein_coding protein_coding MGP_BALBcJ_T0041348.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73646141 73647064 + MGP_BALBcJ_P0041348 Gpaa1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041349.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73646365 73647760 + Gpaa1 protein_coding retained_intron MGP_BALBcJ_T0041350.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73646669 73647390 + MGP_BALBcJ_P0041350 Gpaa1 protein_coding protein_coding MGP_BALBcJ_T0041351.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73647311 73648436 + Gpaa1 protein_coding retained_intron MGP_BALBcJ_T0041352.1 MGP_BALBcJ_G0021951.1 mouse_genomes_project 15 73647873 73648441 + Gpaa1 protein_coding retained_intron MGP_BALBcJ_T0040470.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3399510 3498230 + MGP_BALBcJ_P0040470 Fyb protein_coding protein_coding MGP_BALBcJ_T0040471.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3412462 3455005 + Fyb protein_coding retained_intron MGP_BALBcJ_T0040472.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3417569 3469783 + MGP_BALBcJ_P0040472 Fyb protein_coding protein_coding MGP_BALBcJ_T0040473.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3453990 3467385 + Fyb protein_coding retained_intron MGP_BALBcJ_T0040474.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3479063 3495934 + MGP_BALBcJ_P0040474 Fyb protein_coding protein_coding MGP_BALBcJ_T0040475.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3481798 3487580 + Fyb protein_coding retained_intron MGP_BALBcJ_T0040476.1 MGP_BALBcJ_G0021665.1 mouse_genomes_project 15 3495462 3498309 + Fyb protein_coding retained_intron MGP_BALBcJ_T0000937.1 MGP_BALBcJ_G0000868.1 mouse_genomes_project 15 83445902 83449249 + TEC TEC MGP_BALBcJ_T0101638.1 MGP_BALBcJ_G0039643.1 mouse_genomes_project 15 76760840 76761357 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0011365.1 MGP_BALBcJ_G0009490.1 mouse_genomes_project 15 55718213 55718514 + Gm23789 misc_RNA misc_RNA MGP_BALBcJ_T0042793.1 MGP_BALBcJ_G0022396.1 mouse_genomes_project 15 101117045 101120260 + MGP_BALBcJ_P0042793 Hoxc8 protein_coding protein_coding MGP_BALBcJ_T0042794.1 MGP_BALBcJ_G0022396.1 mouse_genomes_project 15 101118327 101120550 + Hoxc8 protein_coding retained_intron MGP_BALBcJ_T0041928.1 MGP_BALBcJ_G0022116.1 mouse_genomes_project 15 80321198 80326177 - MGP_BALBcJ_P0041928 Cyp2d34 protein_coding protein_coding MGP_BALBcJ_T0102260.1 MGP_BALBcJ_G0040076.1 mouse_genomes_project 15 72575664 72582968 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0041012.1 MGP_BALBcJ_G0021859.1 mouse_genomes_project 15 61022262 61042460 - MGP_BALBcJ_P0041012 protein_coding protein_coding MGP_BALBcJ_T0006797.1 MGP_BALBcJ_G0005599.1 mouse_genomes_project 15 101229577 101231896 - Gm28265 lincRNA lincRNA MGP_BALBcJ_T0006739.1 MGP_BALBcJ_G0005563.1 mouse_genomes_project 15 39739811 39768181 + Gm17473 lincRNA lincRNA MGP_BALBcJ_T0041682.1 MGP_BALBcJ_G0022044.1 mouse_genomes_project 15 77052344 77071298 - MGP_BALBcJ_P0041682 Ddx17 protein_coding protein_coding MGP_BALBcJ_T0003586.1 MGP_BALBcJ_G0003253.1 mouse_genomes_project 15 63928121 63933390 - Gm17140 antisense antisense MGP_BALBcJ_T0041457.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023441 74026397 + MGP_BALBcJ_P0041457 Lrrc14 protein_coding protein_coding MGP_BALBcJ_T0041458.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023456 74030525 + MGP_BALBcJ_P0041458 Lrrc14 protein_coding protein_coding MGP_BALBcJ_T0041459.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023457 74027862 + MGP_BALBcJ_P0041459 Lrrc14 protein_coding protein_coding MGP_BALBcJ_T0041460.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023461 74027911 + MGP_BALBcJ_P0041460 Lrrc14 protein_coding protein_coding MGP_BALBcJ_T0041461.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023461 74027879 + MGP_BALBcJ_P0041461 Lrrc14 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041462.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023467 74025750 + MGP_BALBcJ_P0041462 Lrrc14 protein_coding protein_coding MGP_BALBcJ_T0041463.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023481 74027957 + Lrrc14 protein_coding retained_intron MGP_BALBcJ_T0041464.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023491 74029475 + Lrrc14 protein_coding retained_intron MGP_BALBcJ_T0041465.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023491 74027576 + Lrrc14 protein_coding processed_transcript MGP_BALBcJ_T0041466.1 MGP_BALBcJ_G0021977.1 mouse_genomes_project 15 74023549 74027918 + MGP_BALBcJ_P0041466 Lrrc14 protein_coding protein_coding MGP_BALBcJ_T0006731.1 MGP_BALBcJ_G0005555.1 mouse_genomes_project 15 34111956 34155170 + Gm26766 lincRNA lincRNA MGP_BALBcJ_T0042254.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89525718 89670194 + MGP_BALBcJ_P0042254 Lrrk2 protein_coding protein_coding MGP_BALBcJ_T0042255.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89525824 89670200 + MGP_BALBcJ_P0042255 Lrrk2 protein_coding unknown_likely_coding MGP_BALBcJ_T0042256.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89591455 89641709 + Lrrk2 protein_coding processed_transcript MGP_BALBcJ_T0042257.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89624887 89631034 + Lrrk2 protein_coding processed_transcript MGP_BALBcJ_T0042258.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89632920 89670100 + Lrrk2 protein_coding processed_transcript MGP_BALBcJ_T0042259.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89662048 89670100 + Lrrk2 protein_coding retained_intron MGP_BALBcJ_T0042260.1 MGP_BALBcJ_G0022214.1 mouse_genomes_project 15 89668433 89670193 + Lrrk2 protein_coding retained_intron MGP_BALBcJ_T0102252.1 MGP_BALBcJ_G0040068.1 mouse_genomes_project 15 72396824 72400557 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042695.1 MGP_BALBcJ_G0022371.1 mouse_genomes_project 15 100338641 100361954 - MGP_BALBcJ_P0042695 Rarg protein_coding protein_coding MGP_BALBcJ_T0042696.1 MGP_BALBcJ_G0022371.1 mouse_genomes_project 15 100338643 100350844 - MGP_BALBcJ_P0042696 Rarg protein_coding protein_coding MGP_BALBcJ_T0042697.1 MGP_BALBcJ_G0022371.1 mouse_genomes_project 15 100343693 100361786 - MGP_BALBcJ_P0042697 Rarg protein_coding protein_coding MGP_BALBcJ_T0042698.1 MGP_BALBcJ_G0022371.1 mouse_genomes_project 15 100346284 100347935 - Rarg protein_coding processed_transcript MGP_BALBcJ_T0042699.1 MGP_BALBcJ_G0022371.1 mouse_genomes_project 15 100346288 100349575 - Rarg protein_coding processed_transcript MGP_BALBcJ_T0042700.1 MGP_BALBcJ_G0022371.1 mouse_genomes_project 15 100346288 100354783 - Rarg protein_coding processed_transcript MGP_BALBcJ_T0040978.1 MGP_BALBcJ_G0021841.1 mouse_genomes_project 15 55660763 55812579 + MGP_BALBcJ_P0040978 Fer1l6 protein_coding protein_coding MGP_BALBcJ_T0040979.1 MGP_BALBcJ_G0021841.1 mouse_genomes_project 15 55787881 55796460 + Fer1l6 protein_coding processed_transcript MGP_BALBcJ_T0040980.1 MGP_BALBcJ_G0021841.1 mouse_genomes_project 15 55798042 55814738 + Fer1l6 protein_coding retained_intron MGP_BALBcJ_T0040813.1 MGP_BALBcJ_G0021775.1 mouse_genomes_project 15 35613130 35647685 - MGP_BALBcJ_P0040813 Azin1 protein_coding protein_coding MGP_BALBcJ_T0040814.1 MGP_BALBcJ_G0021775.1 mouse_genomes_project 15 35613952 35647545 - MGP_BALBcJ_P0040814 Azin1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040815.1 MGP_BALBcJ_G0021775.1 mouse_genomes_project 15 35618402 35625819 - Azin1 protein_coding retained_intron MGP_BALBcJ_T0040816.1 MGP_BALBcJ_G0021775.1 mouse_genomes_project 15 35627089 35646538 - MGP_BALBcJ_P0040816 Azin1 protein_coding protein_coding MGP_BALBcJ_T0040817.1 MGP_BALBcJ_G0021775.1 mouse_genomes_project 15 35628856 35646597 - MGP_BALBcJ_P0040817 Azin1 protein_coding protein_coding MGP_BALBcJ_T0040818.1 MGP_BALBcJ_G0021775.1 mouse_genomes_project 15 35642847 35647626 - Azin1 protein_coding processed_transcript MGP_BALBcJ_T0003604.1 MGP_BALBcJ_G0003266.1 mouse_genomes_project 15 83996919 83998344 + Gm15569 antisense antisense MGP_BALBcJ_T0099496.1 MGP_BALBcJ_G0037532.1 mouse_genomes_project 15 97805561 97805668 - Gm25897 snRNA snRNA MGP_BALBcJ_T0006781.1 MGP_BALBcJ_G0005587.1 mouse_genomes_project 15 94077797 94228185 - 2610037D02Rik lincRNA lincRNA MGP_BALBcJ_T0006785.1 MGP_BALBcJ_G0005587.1 mouse_genomes_project 15 94226075 94229072 - 2610037D02Rik lincRNA lincRNA MGP_BALBcJ_T0042194.1 MGP_BALBcJ_G0022197.1 mouse_genomes_project 15 87219653 87221694 + MGP_BALBcJ_P0042194 Klhdc7b protein_coding protein_coding MGP_BALBcJ_T0010063.1 MGP_BALBcJ_G0008188.1 mouse_genomes_project 15 84889593 84889690 + Gm23416 miRNA miRNA MGP_BALBcJ_T0042029.1 MGP_BALBcJ_G0022147.1 mouse_genomes_project 15 82560079 82629442 - MGP_BALBcJ_P0042029 Phf21b protein_coding protein_coding MGP_BALBcJ_T0042030.1 MGP_BALBcJ_G0022147.1 mouse_genomes_project 15 82560080 82562150 - Phf21b protein_coding processed_transcript MGP_BALBcJ_T0042031.1 MGP_BALBcJ_G0022147.1 mouse_genomes_project 15 82560082 82630381 - MGP_BALBcJ_P0042031 Phf21b protein_coding protein_coding MGP_BALBcJ_T0042032.1 MGP_BALBcJ_G0022147.1 mouse_genomes_project 15 82560831 82630083 - MGP_BALBcJ_P0042032 Phf21b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042033.1 MGP_BALBcJ_G0022147.1 mouse_genomes_project 15 82562071 82566149 - Phf21b protein_coding retained_intron MGP_BALBcJ_T0042034.1 MGP_BALBcJ_G0022147.1 mouse_genomes_project 15 82569205 82578102 - Phf21b protein_coding retained_intron MGP_BALBcJ_T0006789.1 MGP_BALBcJ_G0005592.1 mouse_genomes_project 15 98663221 98664194 - C330013E15Rik lincRNA lincRNA MGP_BALBcJ_T0040838.1 MGP_BALBcJ_G0021785.1 mouse_genomes_project 15 36892290 36965522 - MGP_BALBcJ_P0040838 Lrp12 protein_coding protein_coding MGP_BALBcJ_T0040839.1 MGP_BALBcJ_G0021785.1 mouse_genomes_project 15 36892290 36965316 - MGP_BALBcJ_P0040839 Lrp12 protein_coding protein_coding MGP_BALBcJ_T0040840.1 MGP_BALBcJ_G0021785.1 mouse_genomes_project 15 36925477 36965234 - Lrp12 protein_coding retained_intron MGP_BALBcJ_T0040449.1 MGP_BALBcJ_G0021662.1 mouse_genomes_project 15 2049533 2085063 - Ptger4 protein_coding processed_transcript MGP_BALBcJ_T0040450.1 MGP_BALBcJ_G0021662.1 mouse_genomes_project 15 2075751 2086525 - MGP_BALBcJ_P0040450 Ptger4 protein_coding protein_coding MGP_BALBcJ_T0040451.1 MGP_BALBcJ_G0021662.1 mouse_genomes_project 15 2075751 2086540 - MGP_BALBcJ_P0040451 Ptger4 protein_coding protein_coding MGP_BALBcJ_T0041173.1 MGP_BALBcJ_G0021904.1 mouse_genomes_project 15 71905645 71913562 - MGP_BALBcJ_P0041173 D730001G18Rik protein_coding protein_coding MGP_BALBcJ_T0041174.1 MGP_BALBcJ_G0021904.1 mouse_genomes_project 15 71905646 71913597 - MGP_BALBcJ_P0041174 D730001G18Rik protein_coding protein_coding MGP_BALBcJ_T0042831.1 MGP_BALBcJ_G0022409.1 mouse_genomes_project 15 101581090 101626914 + MGP_BALBcJ_P0042831 Nckap1l protein_coding protein_coding MGP_BALBcJ_T0040530.1 MGP_BALBcJ_G0021680.1 mouse_genomes_project 15 6106509 6135737 + Ugt3a1 protein_coding processed_transcript MGP_BALBcJ_T0040531.1 MGP_BALBcJ_G0021680.1 mouse_genomes_project 15 6109015 6195580 + MGP_BALBcJ_P0040531 Ugt3a1 protein_coding protein_coding MGP_BALBcJ_T0040532.1 MGP_BALBcJ_G0021680.1 mouse_genomes_project 15 6109034 6131428 + Ugt3a1 protein_coding processed_transcript MGP_BALBcJ_T0040533.1 MGP_BALBcJ_G0021680.1 mouse_genomes_project 15 6109036 6131350 + Ugt3a1 protein_coding processed_transcript MGP_BALBcJ_T0040534.1 MGP_BALBcJ_G0021680.1 mouse_genomes_project 15 6112687 6121274 + MGP_BALBcJ_P0040534 Ugt3a1 protein_coding protein_coding MGP_BALBcJ_T0041136.1 MGP_BALBcJ_G0021891.1 mouse_genomes_project 15 70896849 70966490 - MGP_BALBcJ_P0041136 Mroh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041137.1 MGP_BALBcJ_G0021891.1 mouse_genomes_project 15 70916366 70919050 - Mroh5 protein_coding processed_transcript MGP_BALBcJ_T0041138.1 MGP_BALBcJ_G0021891.1 mouse_genomes_project 15 70921354 70975179 - MGP_BALBcJ_P0041138 Mroh5 protein_coding protein_coding MGP_BALBcJ_T0041139.1 MGP_BALBcJ_G0021891.1 mouse_genomes_project 15 70921878 70955178 - MGP_BALBcJ_P0041139 Mroh5 protein_coding protein_coding MGP_BALBcJ_T0041140.1 MGP_BALBcJ_G0021891.1 mouse_genomes_project 15 70932145 70975207 - Mroh5 protein_coding retained_intron MGP_BALBcJ_T0041061.1 MGP_BALBcJ_G0021871.1 mouse_genomes_project 15 63718167 63753579 - MGP_BALBcJ_P0041061 Tmem71 protein_coding protein_coding MGP_BALBcJ_T0041481.1 MGP_BALBcJ_G0021980.1 mouse_genomes_project 15 74164754 74183934 - MGP_BALBcJ_P0041481 Zfp251 protein_coding protein_coding MGP_BALBcJ_T0013047.1 MGP_BALBcJ_G0011144.1 mouse_genomes_project 15 51463274 51463679 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041533.1 MGP_BALBcJ_G0022001.1 mouse_genomes_project 15 75381890 75401444 - MGP_BALBcJ_P0041533 Foxred2 protein_coding protein_coding MGP_BALBcJ_T0041534.1 MGP_BALBcJ_G0022001.1 mouse_genomes_project 15 75381894 75387258 - Foxred2 protein_coding retained_intron MGP_BALBcJ_T0041535.1 MGP_BALBcJ_G0022001.1 mouse_genomes_project 15 75382388 75401397 - MGP_BALBcJ_P0041535 Foxred2 protein_coding protein_coding MGP_BALBcJ_T0041536.1 MGP_BALBcJ_G0022001.1 mouse_genomes_project 15 75394120 75401405 - Foxred2 protein_coding retained_intron MGP_BALBcJ_T0013041.1 MGP_BALBcJ_G0011138.1 mouse_genomes_project 15 38225782 38225953 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013039.1 MGP_BALBcJ_G0011136.1 mouse_genomes_project 15 34986808 34987211 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041208.1 MGP_BALBcJ_G0021916.1 mouse_genomes_project 15 72472408 72476172 + MGP_BALBcJ_P0041208 protein_coding protein_coding MGP_BALBcJ_T0041211.1 MGP_BALBcJ_G0021916.1 mouse_genomes_project 15 72472425 72475716 + MGP_BALBcJ_P0041211 protein_coding protein_coding MGP_BALBcJ_T0041212.1 MGP_BALBcJ_G0021916.1 mouse_genomes_project 15 72472425 72476168 + MGP_BALBcJ_P0041212 protein_coding protein_coding MGP_BALBcJ_T0041213.1 MGP_BALBcJ_G0021916.1 mouse_genomes_project 15 72472434 72475660 + MGP_BALBcJ_P0041213 protein_coding protein_coding MGP_BALBcJ_T0041214.1 MGP_BALBcJ_G0021916.1 mouse_genomes_project 15 72472450 72475858 + MGP_BALBcJ_P0041214 protein_coding protein_coding MGP_BALBcJ_T0042789.1 MGP_BALBcJ_G0022393.1 mouse_genomes_project 15 101093483 101098566 + MGP_BALBcJ_P0042789 Hoxc10 protein_coding protein_coding MGP_BALBcJ_T0040452.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3132593 3274210 + Dab2 protein_coding processed_transcript MGP_BALBcJ_T0040453.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3132593 3279402 + MGP_BALBcJ_P0040453 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040454.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3132618 3255808 + MGP_BALBcJ_P0040454 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040455.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3132637 3266629 + MGP_BALBcJ_P0040455 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040456.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3132673 3170416 + Dab2 protein_coding processed_transcript MGP_BALBcJ_T0040457.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3224685 3279395 + MGP_BALBcJ_P0040457 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040458.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3224835 3279395 + MGP_BALBcJ_P0040458 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040459.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3224863 3278318 + MGP_BALBcJ_P0040459 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040460.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3224864 3278338 + MGP_BALBcJ_P0040460 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040461.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3224866 3266629 + MGP_BALBcJ_P0040461 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040462.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3227125 3257186 + MGP_BALBcJ_P0040462 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040463.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3228763 3258705 + MGP_BALBcJ_P0040463 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040464.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3261103 3277597 + MGP_BALBcJ_P0040464 Dab2 protein_coding protein_coding MGP_BALBcJ_T0040465.1 MGP_BALBcJ_G0021663.1 mouse_genomes_project 15 3262025 3263888 + Dab2 protein_coding retained_intron MGP_BALBcJ_T0040761.1 MGP_BALBcJ_G0021761.1 mouse_genomes_project 15 33401228 33401656 - MGP_BALBcJ_P0040761 protein_coding protein_coding MGP_BALBcJ_T0042637.1 MGP_BALBcJ_G0022334.1 mouse_genomes_project 15 99332353 99340218 + MGP_BALBcJ_P0042637 Nr4a1 protein_coding protein_coding MGP_BALBcJ_T0041564.1 MGP_BALBcJ_G0022011.1 mouse_genomes_project 15 75911295 75940302 - MGP_BALBcJ_P0041564 Tmprss6 protein_coding protein_coding MGP_BALBcJ_T0042583.1 MGP_BALBcJ_G0022323.1 mouse_genomes_project 15 98670372 98686990 - MGP_BALBcJ_P0042583 Smagp protein_coding protein_coding MGP_BALBcJ_T0042584.1 MGP_BALBcJ_G0022323.1 mouse_genomes_project 15 98670372 98686980 - MGP_BALBcJ_P0042584 Smagp protein_coding protein_coding MGP_BALBcJ_T0040850.1 MGP_BALBcJ_G0021790.1 mouse_genomes_project 15 39485121 39740529 - MGP_BALBcJ_P0040850 Angpt1 protein_coding protein_coding MGP_BALBcJ_T0040851.1 MGP_BALBcJ_G0021790.1 mouse_genomes_project 15 39487364 39740013 - MGP_BALBcJ_P0040851 Angpt1 protein_coding unknown_likely_coding MGP_BALBcJ_T0041578.1 MGP_BALBcJ_G0022019.1 mouse_genomes_project 15 76252573 76280154 - MGP_BALBcJ_P0041578 Card10 protein_coding protein_coding MGP_BALBcJ_T0041579.1 MGP_BALBcJ_G0022019.1 mouse_genomes_project 15 76253848 76279781 - MGP_BALBcJ_P0041579 Card10 protein_coding protein_coding MGP_BALBcJ_T0041580.1 MGP_BALBcJ_G0022019.1 mouse_genomes_project 15 76264614 76267700 - Card10 protein_coding processed_transcript MGP_BALBcJ_T0041908.1 MGP_BALBcJ_G0022105.1 mouse_genomes_project 15 79871211 79880689 + MGP_BALBcJ_P0041908 1500009C09Rik protein_coding protein_coding MGP_BALBcJ_T0041909.1 MGP_BALBcJ_G0022105.1 mouse_genomes_project 15 79875973 79880704 + MGP_BALBcJ_P0041909 1500009C09Rik protein_coding protein_coding MGP_BALBcJ_T0042048.1 MGP_BALBcJ_G0022157.1 mouse_genomes_project 15 83282034 83292549 - MGP_BALBcJ_P0042048 7530416G11Rik protein_coding protein_coding MGP_BALBcJ_T0041456.1 MGP_BALBcJ_G0021976.1 mouse_genomes_project 15 74016603 74023379 - MGP_BALBcJ_P0041456 Recql4 protein_coding protein_coding MGP_BALBcJ_T0003605.1 MGP_BALBcJ_G0003267.1 mouse_genomes_project 15 87311711 87320237 + C230037L18Rik antisense antisense MGP_BALBcJ_T0003606.1 MGP_BALBcJ_G0003267.1 mouse_genomes_project 15 87311727 87313361 + C230037L18Rik antisense antisense MGP_BALBcJ_T0003607.1 MGP_BALBcJ_G0003267.1 mouse_genomes_project 15 87313186 87320172 + C230037L18Rik antisense antisense MGP_BALBcJ_T0041937.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80833731 80849582 + Serhl protein_coding processed_transcript MGP_BALBcJ_T0041938.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80837102 80849812 + MGP_BALBcJ_P0041938 Serhl protein_coding protein_coding MGP_BALBcJ_T0041939.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80841266 80850821 + Serhl protein_coding processed_transcript MGP_BALBcJ_T0041940.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80848057 80850857 + Serhl protein_coding retained_intron MGP_BALBcJ_T0041941.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80848083 80850882 + Serhl protein_coding retained_intron MGP_BALBcJ_T0041942.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80848088 80861501 + MGP_BALBcJ_P0041942 Serhl protein_coding protein_coding MGP_BALBcJ_T0041943.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80848088 80850439 + MGP_BALBcJ_P0041943 Serhl protein_coding protein_coding MGP_BALBcJ_T0041944.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80848138 80861332 + MGP_BALBcJ_P0041944 Serhl protein_coding protein_coding MGP_BALBcJ_T0041945.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80849379 80851017 + Serhl protein_coding retained_intron MGP_BALBcJ_T0041946.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80851504 80870447 + Serhl protein_coding retained_intron MGP_BALBcJ_T0041947.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80851726 80856147 + Serhl protein_coding retained_intron MGP_BALBcJ_T0041948.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80851728 80853597 + Serhl protein_coding retained_intron MGP_BALBcJ_T0041949.1 MGP_BALBcJ_G0022122.1 mouse_genomes_project 15 80852168 80869196 + MGP_BALBcJ_P0041949 Serhl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041184.1 MGP_BALBcJ_G0021910.1 mouse_genomes_project 15 72034869 72057912 - 2010109I03Rik protein_coding processed_transcript MGP_BALBcJ_T0041185.1 MGP_BALBcJ_G0021910.1 mouse_genomes_project 15 72036235 72040176 - MGP_BALBcJ_P0041185 2010109I03Rik protein_coding protein_coding MGP_BALBcJ_T0099499.1 MGP_BALBcJ_G0037535.1 mouse_genomes_project 15 100576271 100576370 + Gm24128 snRNA snRNA MGP_BALBcJ_T0042322.1 MGP_BALBcJ_G0022238.1 mouse_genomes_project 15 94945074 95007136 - MGP_BALBcJ_P0042322 Slc38a4 protein_coding protein_coding MGP_BALBcJ_T0042323.1 MGP_BALBcJ_G0022238.1 mouse_genomes_project 15 94947016 94970567 - MGP_BALBcJ_P0042323 Slc38a4 protein_coding protein_coding MGP_BALBcJ_T0042470.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291023 97301904 + MGP_BALBcJ_P0042470 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042471.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291175 97312957 + Prpf40b protein_coding retained_intron MGP_BALBcJ_T0042472.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291177 97312053 + Prpf40b protein_coding retained_intron MGP_BALBcJ_T0042473.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291177 97312053 + Prpf40b protein_coding retained_intron MGP_BALBcJ_T0042474.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291180 97303016 + MGP_BALBcJ_P0042474 Prpf40b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042475.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291207 97312957 + MGP_BALBcJ_P0042475 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042476.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97291829 97312949 + MGP_BALBcJ_P0042476 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042477.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97299217 97312438 + MGP_BALBcJ_P0042477 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042478.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97299218 97312946 + MGP_BALBcJ_P0042478 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042479.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97303823 97311032 + Prpf40b protein_coding retained_intron MGP_BALBcJ_T0042480.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97305841 97311829 + Prpf40b protein_coding retained_intron MGP_BALBcJ_T0042481.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97310806 97311733 + Prpf40b protein_coding retained_intron MGP_BALBcJ_T0042482.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97310815 97312610 + MGP_BALBcJ_P0042482 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042483.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97310844 97312752 + MGP_BALBcJ_P0042483 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0042484.1 MGP_BALBcJ_G0022292.1 mouse_genomes_project 15 97311478 97312949 + MGP_BALBcJ_P0042484 Prpf40b protein_coding protein_coding MGP_BALBcJ_T0006787.1 MGP_BALBcJ_G0005590.1 mouse_genomes_project 15 96974039 96977352 + 4930578M01Rik lincRNA lincRNA MGP_BALBcJ_T0042739.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100617473 100636959 - MGP_BALBcJ_P0042739 Map3k12 protein_coding protein_coding MGP_BALBcJ_T0042740.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100618600 100630520 - MGP_BALBcJ_P0042740 Map3k12 protein_coding protein_coding MGP_BALBcJ_T0042741.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100618849 100637187 - MGP_BALBcJ_P0042741 Map3k12 protein_coding protein_coding MGP_BALBcJ_T0042743.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100625194 100637127 - MGP_BALBcJ_P0042743 Map3k12 protein_coding protein_coding MGP_BALBcJ_T0042744.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100625256 100637098 - MGP_BALBcJ_P0042744 Map3k12 protein_coding protein_coding MGP_BALBcJ_T0042745.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100625293 100636939 - MGP_BALBcJ_P0042745 Map3k12 protein_coding protein_coding MGP_BALBcJ_T0042746.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100625942 100636935 - Map3k12 protein_coding processed_transcript MGP_BALBcJ_T0042747.1 MGP_BALBcJ_G0022382.1 mouse_genomes_project 15 100628931 100630612 - Map3k12 protein_coding processed_transcript MGP_BALBcJ_T0100748.1 MGP_BALBcJ_G0038784.1 mouse_genomes_project 15 39007208 39007310 + Gm24751 snoRNA snoRNA MGP_BALBcJ_T0041132.1 MGP_BALBcJ_G0021890.1 mouse_genomes_project 15 70857553 70894072 + MGP_BALBcJ_P0041132 Ptp4a3 protein_coding protein_coding MGP_BALBcJ_T0041133.1 MGP_BALBcJ_G0021890.1 mouse_genomes_project 15 70857553 70894072 + MGP_BALBcJ_P0041133 Ptp4a3 protein_coding protein_coding MGP_BALBcJ_T0041134.1 MGP_BALBcJ_G0021890.1 mouse_genomes_project 15 70859362 70894072 + MGP_BALBcJ_P0041134 Ptp4a3 protein_coding protein_coding MGP_BALBcJ_T0041135.1 MGP_BALBcJ_G0021890.1 mouse_genomes_project 15 70883331 70894072 + MGP_BALBcJ_P0041135 Ptp4a3 protein_coding protein_coding MGP_BALBcJ_T0041202.1 MGP_BALBcJ_G0021912.1 mouse_genomes_project 15 72150406 72153191 - MGP_BALBcJ_P0041202 Ly6a protein_coding protein_coding MGP_BALBcJ_T0010060.1 MGP_BALBcJ_G0008185.1 mouse_genomes_project 15 82726787 82726885 - Mir1249 miRNA miRNA MGP_BALBcJ_T0011364.1 MGP_BALBcJ_G0009489.1 mouse_genomes_project 15 40282652 40282948 - Gm22037 misc_RNA misc_RNA MGP_BALBcJ_T0006788.1 MGP_BALBcJ_G0005591.1 mouse_genomes_project 15 98505560 98514258 - 5330439K02Rik lincRNA lincRNA MGP_BALBcJ_T0041265.1 MGP_BALBcJ_G0021931.1 mouse_genomes_project 15 73212425 73217265 + MGP_BALBcJ_P0041265 Tigd5 protein_coding protein_coding MGP_BALBcJ_T0003581.1 MGP_BALBcJ_G0003248.1 mouse_genomes_project 15 52587042 52589948 - 1700040F17Rik antisense antisense MGP_BALBcJ_T0041583.1 MGP_BALBcJ_G0022022.1 mouse_genomes_project 15 76357324 76375942 + MGP_BALBcJ_P0041583 Gga1 protein_coding protein_coding MGP_BALBcJ_T0100750.1 MGP_BALBcJ_G0038786.1 mouse_genomes_project 15 41420044 41420176 + Gm25093 snoRNA snoRNA MGP_BALBcJ_T0041269.1 MGP_BALBcJ_G0021935.1 mouse_genomes_project 15 73270915 73278419 + Zfp707 protein_coding retained_intron MGP_BALBcJ_T0041270.1 MGP_BALBcJ_G0021935.1 mouse_genomes_project 15 73271054 73278307 + MGP_BALBcJ_P0041270 Zfp707 protein_coding protein_coding MGP_BALBcJ_T0041271.1 MGP_BALBcJ_G0021935.1 mouse_genomes_project 15 73271064 73278295 + MGP_BALBcJ_P0041271 Zfp707 protein_coding protein_coding MGP_BALBcJ_T0041272.1 MGP_BALBcJ_G0021935.1 mouse_genomes_project 15 73271433 73277316 + MGP_BALBcJ_P0041272 Zfp707 protein_coding protein_coding MGP_BALBcJ_T0041273.1 MGP_BALBcJ_G0021935.1 mouse_genomes_project 15 73275333 73276501 + Zfp707 protein_coding retained_intron MGP_BALBcJ_T0017418.1 MGP_BALBcJ_G0015233.1 mouse_genomes_project 15 55353124 55463971 + Gm15943 processed_transcript processed_transcript MGP_BALBcJ_T0041931.1 MGP_BALBcJ_G0022118.1 mouse_genomes_project 15 80464357 80469060 - MGP_BALBcJ_P0041931 Cyp2d40 protein_coding protein_coding MGP_BALBcJ_T0042665.1 MGP_BALBcJ_G0022355.1 mouse_genomes_project 15 99945884 99951243 - MGP_BALBcJ_P0042665 Krt1 protein_coding protein_coding MGP_BALBcJ_T0042623.1 MGP_BALBcJ_G0022330.1 mouse_genomes_project 15 99176120 99180344 + MGP_BALBcJ_P0042623 Ankrd33 protein_coding protein_coding MGP_BALBcJ_T0041300.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475805 73504464 - MGP_BALBcJ_P0041300 Plec protein_coding protein_coding MGP_BALBcJ_T0041301.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475810 73539177 - MGP_BALBcJ_P0041301 Plec protein_coding protein_coding MGP_BALBcJ_T0041302.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475810 73511125 - MGP_BALBcJ_P0041302 Plec protein_coding protein_coding MGP_BALBcJ_T0041303.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475810 73504639 - MGP_BALBcJ_P0041303 Plec protein_coding protein_coding MGP_BALBcJ_T0041304.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475810 73513969 - MGP_BALBcJ_P0041304 Plec protein_coding protein_coding MGP_BALBcJ_T0041305.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475811 73537296 - MGP_BALBcJ_P0041305 Plec protein_coding protein_coding MGP_BALBcJ_T0041306.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475812 73511126 - MGP_BALBcJ_P0041306 Plec protein_coding protein_coding MGP_BALBcJ_T0041307.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475812 73504639 - MGP_BALBcJ_P0041307 Plec protein_coding protein_coding MGP_BALBcJ_T0041308.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475812 73503013 - MGP_BALBcJ_P0041308 Plec protein_coding protein_coding MGP_BALBcJ_T0041309.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475812 73505411 - MGP_BALBcJ_P0041309 Plec protein_coding protein_coding MGP_BALBcJ_T0041310.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73475812 73500514 - MGP_BALBcJ_P0041310 Plec protein_coding protein_coding MGP_BALBcJ_T0041311.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73480216 73492847 - MGP_BALBcJ_P0041311 Plec protein_coding protein_coding MGP_BALBcJ_T0041312.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73491414 73511125 - MGP_BALBcJ_P0041312 Plec protein_coding protein_coding MGP_BALBcJ_T0041313.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73493267 73504639 - MGP_BALBcJ_P0041313 Plec protein_coding protein_coding MGP_BALBcJ_T0041314.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73493267 73513057 - MGP_BALBcJ_P0041314 Plec protein_coding protein_coding MGP_BALBcJ_T0041315.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73493267 73539844 - MGP_BALBcJ_P0041315 Plec protein_coding protein_coding MGP_BALBcJ_T0041316.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73493344 73540369 - MGP_BALBcJ_P0041316 Plec protein_coding protein_coding MGP_BALBcJ_T0041317.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73499196 73513969 - MGP_BALBcJ_P0041317 Plec protein_coding protein_coding MGP_BALBcJ_T0041318.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73499196 73505411 - MGP_BALBcJ_P0041318 Plec protein_coding protein_coding MGP_BALBcJ_T0041319.1 MGP_BALBcJ_G0021944.1 mouse_genomes_project 15 73538533 73540373 - Plec protein_coding retained_intron MGP_BALBcJ_T0042701.1 MGP_BALBcJ_G0022372.1 mouse_genomes_project 15 100383993 100386282 + MGP_BALBcJ_P0042701 Mfsd5 protein_coding protein_coding MGP_BALBcJ_T0041172.1 MGP_BALBcJ_G0021903.1 mouse_genomes_project 15 71896793 71898358 - MGP_BALBcJ_P0041172 Ly6d protein_coding protein_coding MGP_BALBcJ_T0041652.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76791975 76837023 - MGP_BALBcJ_P0041652 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041653.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76791975 76836971 - MGP_BALBcJ_P0041653 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041654.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76791975 76836998 - MGP_BALBcJ_P0041654 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041655.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76791975 76836759 - MGP_BALBcJ_P0041655 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041656.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76791979 76837048 - MGP_BALBcJ_P0041656 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041657.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76794981 76810583 - Pla2g6 protein_coding retained_intron MGP_BALBcJ_T0041658.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76809099 76814816 - Pla2g6 protein_coding retained_intron MGP_BALBcJ_T0041659.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76814771 76817898 - Pla2g6 protein_coding retained_intron MGP_BALBcJ_T0041660.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76817954 76837185 - MGP_BALBcJ_P0041660 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041661.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76819346 76825969 - Pla2g6 protein_coding retained_intron MGP_BALBcJ_T0041662.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76819414 76831647 - MGP_BALBcJ_P0041662 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041663.1 MGP_BALBcJ_G0022038.1 mouse_genomes_project 15 76825827 76833285 - MGP_BALBcJ_P0041663 Pla2g6 protein_coding protein_coding MGP_BALBcJ_T0041913.1 MGP_BALBcJ_G0022108.1 mouse_genomes_project 15 79951824 79963985 - MGP_BALBcJ_P0041913 Naga protein_coding protein_coding MGP_BALBcJ_T0010082.1 MGP_BALBcJ_G0008207.1 mouse_genomes_project 15 100790324 100790399 - Mir688 miRNA miRNA MGP_BALBcJ_T0041015.1 MGP_BALBcJ_G0021861.1 mouse_genomes_project 15 61152144 61284815 - MGP_BALBcJ_P0041015 Fam49b protein_coding protein_coding MGP_BALBcJ_T0041016.1 MGP_BALBcJ_G0021861.1 mouse_genomes_project 15 61153991 61221121 - MGP_BALBcJ_P0041016 Fam49b protein_coding protein_coding MGP_BALBcJ_T0041141.1 MGP_BALBcJ_G0021892.1 mouse_genomes_project 15 70970068 70975416 + MGP_BALBcJ_P0041141 Gm6569 protein_coding protein_coding MGP_BALBcJ_T0102262.1 MGP_BALBcJ_G0040078.1 mouse_genomes_project 15 96443851 96447811 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042040.1 MGP_BALBcJ_G0022151.1 mouse_genomes_project 15 82792983 82798403 + MGP_BALBcJ_P0042040 Upk3a protein_coding protein_coding MGP_BALBcJ_T0042453.1 MGP_BALBcJ_G0022282.1 mouse_genomes_project 15 96889845 96903663 - MGP_BALBcJ_P0042453 Lmbr1l protein_coding protein_coding MGP_BALBcJ_T0042454.1 MGP_BALBcJ_G0022282.1 mouse_genomes_project 15 96891583 96894663 - Lmbr1l protein_coding processed_transcript MGP_BALBcJ_T0042455.1 MGP_BALBcJ_G0022282.1 mouse_genomes_project 15 96892668 96894989 - Lmbr1l protein_coding retained_intron MGP_BALBcJ_T0042456.1 MGP_BALBcJ_G0022282.1 mouse_genomes_project 15 96893605 96895186 - Lmbr1l protein_coding retained_intron MGP_BALBcJ_T0042457.1 MGP_BALBcJ_G0022282.1 mouse_genomes_project 15 96899227 96903797 - Lmbr1l protein_coding processed_transcript MGP_BALBcJ_T0042458.1 MGP_BALBcJ_G0022282.1 mouse_genomes_project 15 96900901 96903492 - Lmbr1l protein_coding processed_transcript MGP_BALBcJ_T0100735.1 MGP_BALBcJ_G0038771.1 mouse_genomes_project 15 24124716 24124847 - Gm23903 snoRNA snoRNA MGP_BALBcJ_T0000925.1 MGP_BALBcJ_G0000856.1 mouse_genomes_project 15 3817487 3823959 + TEC TEC MGP_BALBcJ_T0006735.1 MGP_BALBcJ_G0005559.1 mouse_genomes_project 15 35678395 35728585 - 2310043O21Rik lincRNA lincRNA MGP_BALBcJ_T0041410.1 MGP_BALBcJ_G0021963.1 mouse_genomes_project 15 73833779 73839681 - MGP_BALBcJ_P0041410 Scrt1 protein_coding protein_coding MGP_BALBcJ_T0041411.1 MGP_BALBcJ_G0021963.1 mouse_genomes_project 15 73833789 73839454 - MGP_BALBcJ_P0041411 Scrt1 protein_coding protein_coding MGP_BALBcJ_T0100730.1 MGP_BALBcJ_G0038766.1 mouse_genomes_project 15 8189064 8189191 - Gm24844 snoRNA snoRNA MGP_BALBcJ_T0010007.1 MGP_BALBcJ_G0008132.1 mouse_genomes_project 15 9009890 9009973 + Mir1898 miRNA miRNA MGP_BALBcJ_T0041555.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75900164 75910125 + MGP_BALBcJ_P0041555 Kctd17 protein_coding protein_coding MGP_BALBcJ_T0041556.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75900164 75910125 + MGP_BALBcJ_P0041556 Kctd17 protein_coding protein_coding MGP_BALBcJ_T0041557.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75900228 75910537 + MGP_BALBcJ_P0041557 Kctd17 protein_coding protein_coding MGP_BALBcJ_T0041558.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75900262 75910471 + MGP_BALBcJ_P0041558 Kctd17 protein_coding protein_coding MGP_BALBcJ_T0041559.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75900291 75907488 + Kctd17 protein_coding retained_intron MGP_BALBcJ_T0041560.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75900396 75910275 + MGP_BALBcJ_P0041560 Kctd17 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041561.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75901712 75910208 + MGP_BALBcJ_P0041561 Kctd17 protein_coding protein_coding MGP_BALBcJ_T0041562.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75904613 75909362 + Kctd17 protein_coding retained_intron MGP_BALBcJ_T0041563.1 MGP_BALBcJ_G0022010.1 mouse_genomes_project 15 75905609 75909207 + Kctd17 protein_coding retained_intron MGP_BALBcJ_T0040891.1 MGP_BALBcJ_G0021807.1 mouse_genomes_project 15 49231253 49236869 + MGP_BALBcJ_P0040891 Aard protein_coding protein_coding MGP_BALBcJ_T0041838.1 MGP_BALBcJ_G0022084.1 mouse_genomes_project 15 79277786 79294874 - MGP_BALBcJ_P0041838 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041841.1 MGP_BALBcJ_G0022084.1 mouse_genomes_project 15 79286883 79295053 - MGP_BALBcJ_P0041841 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041842.1 MGP_BALBcJ_G0022084.1 mouse_genomes_project 15 79291595 79298082 - MGP_BALBcJ_P0041842 protein_coding unknown_likely_coding MGP_BALBcJ_T0041784.1 MGP_BALBcJ_G0022073.1 mouse_genomes_project 15 78558941 78569059 + MGP_BALBcJ_P0041784 Sgsm3 protein_coding protein_coding MGP_BALBcJ_T0042525.1 MGP_BALBcJ_G0022304.1 mouse_genomes_project 15 97704171 97715158 + MGP_BALBcJ_P0042525 Smarcd1 protein_coding protein_coding MGP_BALBcJ_T0003612.1 MGP_BALBcJ_G0003272.1 mouse_genomes_project 15 96567247 96568348 + Gm29331 antisense antisense MGP_BALBcJ_T0006786.1 MGP_BALBcJ_G0005589.1 mouse_genomes_project 15 96788451 96800275 + B130046B21Rik lincRNA lincRNA MGP_BALBcJ_T0041859.1 MGP_BALBcJ_G0022090.1 mouse_genomes_project 15 79469104 79475107 - Phf5a protein_coding processed_transcript MGP_BALBcJ_T0041860.1 MGP_BALBcJ_G0022090.1 mouse_genomes_project 15 79469218 79475306 - MGP_BALBcJ_P0041860 Phf5a protein_coding unknown_likely_coding MGP_BALBcJ_T0042787.1 MGP_BALBcJ_G0022391.1 mouse_genomes_project 15 101063148 101065010 + MGP_BALBcJ_P0042787 Hoxc12 protein_coding protein_coding MGP_BALBcJ_T0006760.1 MGP_BALBcJ_G0005572.1 mouse_genomes_project 15 74392881 74404747 + 1700109K24Rik lincRNA lincRNA MGP_BALBcJ_T0042273.1 MGP_BALBcJ_G0022219.1 mouse_genomes_project 15 91151117 91203879 - MGP_BALBcJ_P0042273 Yaf2 protein_coding protein_coding MGP_BALBcJ_T0042274.1 MGP_BALBcJ_G0022219.1 mouse_genomes_project 15 91151120 91204017 - Yaf2 protein_coding processed_transcript MGP_BALBcJ_T0099484.1 MGP_BALBcJ_G0037520.1 mouse_genomes_project 15 77627497 77627604 - Gm24204 snRNA snRNA MGP_BALBcJ_T0042680.1 MGP_BALBcJ_G0022366.1 mouse_genomes_project 15 100247089 100252206 + MGP_BALBcJ_P0042680 Igfbp6 protein_coding protein_coding MGP_BALBcJ_T0013046.1 MGP_BALBcJ_G0011143.1 mouse_genomes_project 15 51188082 51189559 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042646.1 MGP_BALBcJ_G0022338.1 mouse_genomes_project 15 99505325 99511887 - MGP_BALBcJ_P0042646 Krt87 protein_coding protein_coding MGP_BALBcJ_T0042303.1 MGP_BALBcJ_G0022227.1 mouse_genomes_project 15 92522426 93003209 + MGP_BALBcJ_P0042303 Tmem117 protein_coding protein_coding MGP_BALBcJ_T0042676.1 MGP_BALBcJ_G0022365.1 mouse_genomes_project 15 100219379 100238922 - Spryd3 protein_coding retained_intron MGP_BALBcJ_T0042677.1 MGP_BALBcJ_G0022365.1 mouse_genomes_project 15 100219379 100238964 - MGP_BALBcJ_P0042677 Spryd3 protein_coding protein_coding MGP_BALBcJ_T0042678.1 MGP_BALBcJ_G0022365.1 mouse_genomes_project 15 100221020 100231677 - Spryd3 protein_coding processed_transcript MGP_BALBcJ_T0042679.1 MGP_BALBcJ_G0022365.1 mouse_genomes_project 15 100233004 100233695 - Spryd3 protein_coding retained_intron MGP_BALBcJ_T0041819.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79174456 79177453 + Ep300 protein_coding processed_transcript MGP_BALBcJ_T0041820.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79174502 79248405 + MGP_BALBcJ_P0041820 Ep300 protein_coding protein_coding MGP_BALBcJ_T0041821.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79175325 79213648 + Ep300 protein_coding retained_intron MGP_BALBcJ_T0041822.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79202572 79212948 + MGP_BALBcJ_P0041822 Ep300 protein_coding protein_coding MGP_BALBcJ_T0041823.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79202590 79205798 + Ep300 protein_coding retained_intron MGP_BALBcJ_T0041824.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79210491 79215883 + MGP_BALBcJ_P0041824 Ep300 protein_coding protein_coding MGP_BALBcJ_T0041825.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79215809 79217293 + MGP_BALBcJ_P0041825 Ep300 protein_coding protein_coding MGP_BALBcJ_T0041826.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79226234 79232809 + Ep300 protein_coding retained_intron MGP_BALBcJ_T0041827.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79228403 79237016 + Ep300 protein_coding retained_intron MGP_BALBcJ_T0041828.1 MGP_BALBcJ_G0022082.1 mouse_genomes_project 15 79237260 79241593 + Ep300 protein_coding retained_intron MGP_BALBcJ_T0040690.1 MGP_BALBcJ_G0021734.1 mouse_genomes_project 15 28629824 28649699 + MGP_BALBcJ_P0040690 Cmbl protein_coding protein_coding MGP_BALBcJ_T0040691.1 MGP_BALBcJ_G0021734.1 mouse_genomes_project 15 28629938 28651560 + MGP_BALBcJ_P0040691 Cmbl protein_coding protein_coding MGP_BALBcJ_T0040692.1 MGP_BALBcJ_G0021734.1 mouse_genomes_project 15 28633221 28646767 + MGP_BALBcJ_P0040692 Cmbl protein_coding protein_coding MGP_BALBcJ_T0042036.1 MGP_BALBcJ_G0022149.1 mouse_genomes_project 15 82698685 82718217 + MGP_BALBcJ_P0042036 Nup50 protein_coding protein_coding MGP_BALBcJ_T0100773.1 MGP_BALBcJ_G0038809.1 mouse_genomes_project 15 97126307 97126413 - Gm25183 snoRNA snoRNA MGP_BALBcJ_T0042242.1 MGP_BALBcJ_G0022210.1 mouse_genomes_project 15 88768036 88891556 - MGP_BALBcJ_P0042242 Kif21a protein_coding protein_coding MGP_BALBcJ_T0042243.1 MGP_BALBcJ_G0022210.1 mouse_genomes_project 15 88768036 88891556 - MGP_BALBcJ_P0042243 Kif21a protein_coding protein_coding MGP_BALBcJ_T0042244.1 MGP_BALBcJ_G0022210.1 mouse_genomes_project 15 88768036 88891556 - MGP_BALBcJ_P0042244 Kif21a protein_coding protein_coding MGP_BALBcJ_T0042245.1 MGP_BALBcJ_G0022210.1 mouse_genomes_project 15 88768036 88891556 - MGP_BALBcJ_P0042245 Kif21a protein_coding protein_coding MGP_BALBcJ_T0042246.1 MGP_BALBcJ_G0022210.1 mouse_genomes_project 15 88768036 88891556 - MGP_BALBcJ_P0042246 Kif21a protein_coding protein_coding MGP_BALBcJ_T0006777.1 MGP_BALBcJ_G0005585.1 mouse_genomes_project 15 90206263 90240984 + Gm26760 lincRNA lincRNA MGP_BALBcJ_T0040877.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47821513 48068808 - MGP_BALBcJ_P0040877 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040878.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47825297 48069038 - MGP_BALBcJ_P0040878 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040879.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47825315 48068072 - MGP_BALBcJ_P0040879 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040880.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47827319 48068069 - MGP_BALBcJ_P0040880 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040881.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47827320 48061829 - MGP_BALBcJ_P0040881 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040882.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47827336 48069365 - MGP_BALBcJ_P0040882 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040883.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 47996727 48004757 - MGP_BALBcJ_P0040883 Trps1 protein_coding protein_coding MGP_BALBcJ_T0040884.1 MGP_BALBcJ_G0021803.1 mouse_genomes_project 15 48023975 48069787 - MGP_BALBcJ_P0040884 Trps1 protein_coding protein_coding MGP_BALBcJ_T0041227.1 MGP_BALBcJ_G0021921.1 mouse_genomes_project 15 72890676 72892262 + MGP_BALBcJ_P0041227 Gpihbp1 protein_coding protein_coding MGP_BALBcJ_T0041228.1 MGP_BALBcJ_G0021921.1 mouse_genomes_project 15 72890678 72892262 + MGP_BALBcJ_P0041228 Gpihbp1 protein_coding protein_coding MGP_BALBcJ_T0041229.1 MGP_BALBcJ_G0021921.1 mouse_genomes_project 15 72890702 72893530 + MGP_BALBcJ_P0041229 Gpihbp1 protein_coding protein_coding MGP_BALBcJ_T0041230.1 MGP_BALBcJ_G0021921.1 mouse_genomes_project 15 72890716 72892237 + Gpihbp1 protein_coding retained_intron MGP_BALBcJ_T0041231.1 MGP_BALBcJ_G0021921.1 mouse_genomes_project 15 72890716 72891993 + Gpihbp1 protein_coding retained_intron MGP_BALBcJ_T0010046.1 MGP_BALBcJ_G0008171.1 mouse_genomes_project 15 78491661 78491743 + Mir5113 miRNA miRNA MGP_BALBcJ_T0098516.1 MGP_BALBcJ_G0036570.1 mouse_genomes_project 15 30657566 30657697 - Gm24476 rRNA rRNA MGP_BALBcJ_T0040688.1 MGP_BALBcJ_G0021732.1 mouse_genomes_project 15 28485075 28497736 - MGP_BALBcJ_P0040688 Ropn1l protein_coding protein_coding MGP_BALBcJ_T0100755.1 MGP_BALBcJ_G0038791.1 mouse_genomes_project 15 55180024 55180160 - Gm22299 snoRNA snoRNA MGP_BALBcJ_T0040588.1 MGP_BALBcJ_G0021698.1 mouse_genomes_project 15 8211725 8227701 - MGP_BALBcJ_P0040588 Tars protein_coding protein_coding MGP_BALBcJ_T0100753.1 MGP_BALBcJ_G0038789.1 mouse_genomes_project 15 49689555 49689687 + Gm23267 snoRNA snoRNA MGP_BALBcJ_T0041538.1 MGP_BALBcJ_G0022003.1 mouse_genomes_project 15 75436851 75567531 - MGP_BALBcJ_P0041538 Cacng2 protein_coding protein_coding MGP_BALBcJ_T0041428.1 MGP_BALBcJ_G0021968.1 mouse_genomes_project 15 73924451 73928911 - MGP_BALBcJ_P0041428 Slc39a4 protein_coding protein_coding MGP_BALBcJ_T0040707.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31137739 31158557 + Mtdh protein_coding retained_intron MGP_BALBcJ_T0040708.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31137764 31197915 + MGP_BALBcJ_P0040708 Mtdh protein_coding protein_coding MGP_BALBcJ_T0040709.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31137770 31179895 + Mtdh protein_coding retained_intron MGP_BALBcJ_T0040710.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31138081 31189870 + MGP_BALBcJ_P0040710 Mtdh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040711.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31138353 31192309 + MGP_BALBcJ_P0040711 Mtdh protein_coding protein_coding MGP_BALBcJ_T0040712.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31138364 31192340 + MGP_BALBcJ_P0040712 Mtdh protein_coding protein_coding MGP_BALBcJ_T0040713.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31138367 31179289 + MGP_BALBcJ_P0040713 Mtdh protein_coding protein_coding MGP_BALBcJ_T0040714.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31138900 31173357 + Mtdh protein_coding processed_transcript MGP_BALBcJ_T0040715.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31170299 31196239 + MGP_BALBcJ_P0040715 Mtdh protein_coding protein_coding MGP_BALBcJ_T0040716.1 MGP_BALBcJ_G0021742.1 mouse_genomes_project 15 31189028 31196812 + Mtdh protein_coding processed_transcript MGP_BALBcJ_T0041131.1 MGP_BALBcJ_G0021889.1 mouse_genomes_project 15 70828765 70842011 - MGP_BALBcJ_P0041131 Gpr20 protein_coding protein_coding MGP_BALBcJ_T0042649.1 MGP_BALBcJ_G0022341.1 mouse_genomes_project 15 99547041 99553687 + MGP_BALBcJ_P0042649 Krt86 protein_coding protein_coding MGP_BALBcJ_T0041932.1 MGP_BALBcJ_G0022119.1 mouse_genomes_project 15 80507543 80529842 - MGP_BALBcJ_P0041932 Cyp2d26 protein_coding protein_coding MGP_BALBcJ_T0100754.1 MGP_BALBcJ_G0038790.1 mouse_genomes_project 15 50772003 50772135 - Gm23200 snoRNA snoRNA MGP_BALBcJ_T0040673.1 MGP_BALBcJ_G0021725.1 mouse_genomes_project 15 24709923 24737687 - MGP_BALBcJ_P0040673 Fam105a protein_coding protein_coding MGP_BALBcJ_T0040674.1 MGP_BALBcJ_G0021725.1 mouse_genomes_project 15 24711115 24737596 - MGP_BALBcJ_P0040674 Fam105a protein_coding unknown_likely_coding MGP_BALBcJ_T0100752.1 MGP_BALBcJ_G0038788.1 mouse_genomes_project 15 44882745 44882882 + Gm23530 snoRNA snoRNA MGP_BALBcJ_T0000932.1 MGP_BALBcJ_G0000863.1 mouse_genomes_project 15 59108487 59113115 - TEC TEC MGP_BALBcJ_T0006768.1 MGP_BALBcJ_G0005579.1 mouse_genomes_project 15 80726738 80732951 + AW121686 lincRNA lincRNA MGP_BALBcJ_T0040975.1 MGP_BALBcJ_G0021839.1 mouse_genomes_project 15 55482112 55513392 - MGP_BALBcJ_P0040975 Anxa13 protein_coding protein_coding MGP_BALBcJ_T0040976.1 MGP_BALBcJ_G0021839.1 mouse_genomes_project 15 55482112 55538450 - MGP_BALBcJ_P0040976 Anxa13 protein_coding unknown_likely_coding MGP_BALBcJ_T0042287.1 MGP_BALBcJ_G0022222.1 mouse_genomes_project 15 91369440 91475636 - MGP_BALBcJ_P0042287 Prickle1 protein_coding protein_coding MGP_BALBcJ_T0042288.1 MGP_BALBcJ_G0022222.1 mouse_genomes_project 15 91369440 91392825 - MGP_BALBcJ_P0042288 Prickle1 protein_coding protein_coding MGP_BALBcJ_T0042371.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96008039 96060356 - MGP_BALBcJ_P0042371 Senp1 protein_coding protein_coding MGP_BALBcJ_T0042372.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96008435 96031425 - Senp1 protein_coding retained_intron MGP_BALBcJ_T0042373.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96008596 96061226 - MGP_BALBcJ_P0042373 Senp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042374.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96008936 96060908 - MGP_BALBcJ_P0042374 Senp1 protein_coding protein_coding MGP_BALBcJ_T0042375.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96010089 96016248 - Senp1 protein_coding processed_transcript MGP_BALBcJ_T0042376.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96030291 96061027 - Senp1 protein_coding retained_intron MGP_BALBcJ_T0042377.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96052193 96054696 - MGP_BALBcJ_P0042377 Senp1 protein_coding protein_coding MGP_BALBcJ_T0042378.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96055708 96060962 - Senp1 protein_coding processed_transcript MGP_BALBcJ_T0042379.1 MGP_BALBcJ_G0022249.1 mouse_genomes_project 15 96056342 96060544 - Senp1 protein_coding processed_transcript MGP_BALBcJ_T0042177.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187529 87204629 + MGP_BALBcJ_P0042177 Ncaph2 protein_coding protein_coding MGP_BALBcJ_T0042178.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187546 87204629 + MGP_BALBcJ_P0042178 Ncaph2 protein_coding protein_coding MGP_BALBcJ_T0042179.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187546 87204629 + MGP_BALBcJ_P0042179 Ncaph2 protein_coding protein_coding MGP_BALBcJ_T0042180.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187573 87204629 + MGP_BALBcJ_P0042180 Ncaph2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042181.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187615 87195683 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042182.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187631 87195707 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042183.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87187724 87197134 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042184.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87201494 87202478 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042185.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87201680 87203043 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042186.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87201835 87202992 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042187.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87202100 87202735 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042188.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87202449 87203327 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042189.1 MGP_BALBcJ_G0022193.1 mouse_genomes_project 15 87202555 87203366 + Ncaph2 protein_coding retained_intron MGP_BALBcJ_T0042526.1 MGP_BALBcJ_G0022305.1 mouse_genomes_project 15 97718643 97726088 + MGP_BALBcJ_P0042526 Gpd1 protein_coding protein_coding MGP_BALBcJ_T0042527.1 MGP_BALBcJ_G0022305.1 mouse_genomes_project 15 97718707 97724875 + MGP_BALBcJ_P0042527 Gpd1 protein_coding protein_coding MGP_BALBcJ_T0042528.1 MGP_BALBcJ_G0022305.1 mouse_genomes_project 15 97721123 97723165 + Gpd1 protein_coding retained_intron MGP_BALBcJ_T0040757.1 MGP_BALBcJ_G0021758.1 mouse_genomes_project 15 33262621 33265619 + MGP_BALBcJ_P0040757 Polr2k protein_coding protein_coding MGP_BALBcJ_T0040758.1 MGP_BALBcJ_G0021758.1 mouse_genomes_project 15 33262644 33265622 + MGP_BALBcJ_P0040758 Polr2k protein_coding protein_coding MGP_BALBcJ_T0099488.1 MGP_BALBcJ_G0037524.1 mouse_genomes_project 15 83134503 83134695 - Gm23517 snRNA snRNA MGP_BALBcJ_T0042407.1 MGP_BALBcJ_G0022264.1 mouse_genomes_project 15 96464800 96470576 + MGP_BALBcJ_P0042407 Olfr279 protein_coding protein_coding MGP_BALBcJ_T0042408.1 MGP_BALBcJ_G0022264.1 mouse_genomes_project 15 96469643 96470576 + MGP_BALBcJ_P0042408 Olfr279 protein_coding protein_coding MGP_BALBcJ_T0041915.1 MGP_BALBcJ_G0022110.1 mouse_genomes_project 15 79964117 79974215 + Smdt1 protein_coding processed_transcript MGP_BALBcJ_T0041918.1 MGP_BALBcJ_G0022110.1 mouse_genomes_project 15 79966140 79974163 + Smdt1 protein_coding processed_transcript MGP_BALBcJ_T0041920.1 MGP_BALBcJ_G0022110.1 mouse_genomes_project 15 79971104 79974246 + MGP_BALBcJ_P0041920 Smdt1 protein_coding protein_coding MGP_BALBcJ_T0041921.1 MGP_BALBcJ_G0022110.1 mouse_genomes_project 15 79971164 79974247 + MGP_BALBcJ_P0041921 Smdt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041922.1 MGP_BALBcJ_G0022110.1 mouse_genomes_project 15 79972370 79974025 + MGP_BALBcJ_P0041922 Smdt1 protein_coding protein_coding MGP_BALBcJ_T0011378.1 MGP_BALBcJ_G0009503.1 mouse_genomes_project 15 101071731 101071800 + Gm27337 misc_RNA misc_RNA MGP_BALBcJ_T0098514.1 MGP_BALBcJ_G0036568.1 mouse_genomes_project 15 9833107 9833207 + Gm24664 rRNA rRNA MGP_BALBcJ_T0099478.1 MGP_BALBcJ_G0037514.1 mouse_genomes_project 15 70863596 70863723 + Gm22106 snRNA snRNA MGP_BALBcJ_T0041712.1 MGP_BALBcJ_G0022055.1 mouse_genomes_project 15 77361305 77371618 - MGP_BALBcJ_P0041712 Cbx6 protein_coding protein_coding MGP_BALBcJ_T0041713.1 MGP_BALBcJ_G0022055.1 mouse_genomes_project 15 77363542 77371644 - MGP_BALBcJ_P0041713 Cbx6 protein_coding protein_coding MGP_BALBcJ_T0041714.1 MGP_BALBcJ_G0022055.1 mouse_genomes_project 15 77366037 77371205 - Cbx6 protein_coding processed_transcript MGP_BALBcJ_T0041715.1 MGP_BALBcJ_G0022055.1 mouse_genomes_project 15 77366178 77371687 - MGP_BALBcJ_P0041715 Cbx6 protein_coding protein_coding MGP_BALBcJ_T0041716.1 MGP_BALBcJ_G0022055.1 mouse_genomes_project 15 77369978 77371732 - Cbx6 protein_coding processed_transcript MGP_BALBcJ_T0041717.1 MGP_BALBcJ_G0022055.1 mouse_genomes_project 15 77370651 77371681 - Cbx6 protein_coding processed_transcript MGP_BALBcJ_T0040985.1 MGP_BALBcJ_G0021846.1 mouse_genomes_project 15 56043626 56086386 - MGP_BALBcJ_P0040985 Tatdn1 protein_coding protein_coding MGP_BALBcJ_T0041206.1 MGP_BALBcJ_G0021915.1 mouse_genomes_project 15 72472354 72475894 + MGP_BALBcJ_P0041206 protein_coding protein_coding MGP_BALBcJ_T0041207.1 MGP_BALBcJ_G0021915.1 mouse_genomes_project 15 72472354 72476170 + MGP_BALBcJ_P0041207 protein_coding protein_coding MGP_BALBcJ_T0040826.1 MGP_BALBcJ_G0021780.1 mouse_genomes_project 15 36101251 36119947 - MGP_BALBcJ_P0040826 Slc25a32 protein_coding protein_coding MGP_BALBcJ_T0041867.1 MGP_BALBcJ_G0022092.1 mouse_genomes_project 15 79518479 79529447 - MGP_BALBcJ_P0041867 Polr3h protein_coding protein_coding MGP_BALBcJ_T0040668.1 MGP_BALBcJ_G0021721.1 mouse_genomes_project 15 23612182 23965708 - MGP_BALBcJ_P0040668 Fbxl7 protein_coding protein_coding MGP_BALBcJ_T0041930.1 MGP_BALBcJ_G0022117.1 mouse_genomes_project 15 80392585 80393951 - MGP_BALBcJ_P0041930 Cyp2d37-ps protein_coding protein_coding MGP_BALBcJ_T0040647.1 MGP_BALBcJ_G0021715.1 mouse_genomes_project 15 22448184 22499679 - MGP_BALBcJ_P0040647 Basp1 protein_coding protein_coding MGP_BALBcJ_T0042321.1 MGP_BALBcJ_G0022237.1 mouse_genomes_project 15 94720150 94720531 - MGP_BALBcJ_P0042321 Gm8888 protein_coding protein_coding MGP_BALBcJ_T0011372.1 MGP_BALBcJ_G0009497.1 mouse_genomes_project 15 83956093 83956391 + Gm24011 misc_RNA misc_RNA MGP_BALBcJ_T0042103.1 MGP_BALBcJ_G0022176.1 mouse_genomes_project 15 86716906 86782491 - MGP_BALBcJ_P0042103 Ttll8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042104.1 MGP_BALBcJ_G0022176.1 mouse_genomes_project 15 86739987 86782483 - MGP_BALBcJ_P0042104 Ttll8 protein_coding protein_coding MGP_BALBcJ_T0042105.1 MGP_BALBcJ_G0022176.1 mouse_genomes_project 15 86740043 86782132 - MGP_BALBcJ_P0042105 Ttll8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042106.1 MGP_BALBcJ_G0022176.1 mouse_genomes_project 15 86740121 86782676 - MGP_BALBcJ_P0042106 Ttll8 protein_coding unknown_likely_coding MGP_BALBcJ_T0042107.1 MGP_BALBcJ_G0022176.1 mouse_genomes_project 15 86741758 86745958 - Ttll8 protein_coding retained_intron MGP_BALBcJ_T0041236.1 MGP_BALBcJ_G0021923.1 mouse_genomes_project 15 72951048 72973044 - MGP_BALBcJ_P0041236 Top1mt protein_coding protein_coding MGP_BALBcJ_T0006763.1 MGP_BALBcJ_G0005575.1 mouse_genomes_project 15 77233235 77236470 - Gm26884 lincRNA lincRNA MGP_BALBcJ_T0042503.1 MGP_BALBcJ_G0022296.1 mouse_genomes_project 15 97469254 97473883 - MGP_BALBcJ_P0042503 Bcdin3d protein_coding protein_coding MGP_BALBcJ_T0000929.1 MGP_BALBcJ_G0000860.1 mouse_genomes_project 15 17271357 17273490 - TEC TEC MGP_BALBcJ_T0041101.1 MGP_BALBcJ_G0021881.1 mouse_genomes_project 15 68909639 69150686 - MGP_BALBcJ_P0041101 Col22a1 protein_coding protein_coding MGP_BALBcJ_T0041102.1 MGP_BALBcJ_G0021881.1 mouse_genomes_project 15 68982493 69012319 - MGP_BALBcJ_P0041102 Col22a1 protein_coding protein_coding MGP_BALBcJ_T0041103.1 MGP_BALBcJ_G0021881.1 mouse_genomes_project 15 69019419 69069571 - Col22a1 protein_coding processed_transcript MGP_BALBcJ_T0041104.1 MGP_BALBcJ_G0021881.1 mouse_genomes_project 15 69037603 69069596 - MGP_BALBcJ_P0041104 Col22a1 protein_coding protein_coding MGP_BALBcJ_T0099481.1 MGP_BALBcJ_G0037517.1 mouse_genomes_project 15 74375938 74376034 + Gm24753 snRNA snRNA MGP_BALBcJ_T0041894.1 MGP_BALBcJ_G0022097.1 mouse_genomes_project 15 79654051 79658632 - MGP_BALBcJ_P0041894 protein_coding protein_coding MGP_BALBcJ_T0041526.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75354402 75355056 - Txn2 protein_coding processed_transcript MGP_BALBcJ_T0041527.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75354402 75369694 - MGP_BALBcJ_P0041527 Txn2 protein_coding protein_coding MGP_BALBcJ_T0041528.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75354402 75368531 - MGP_BALBcJ_P0041528 Txn2 protein_coding protein_coding MGP_BALBcJ_T0041529.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75354559 75368414 - MGP_BALBcJ_P0041529 Txn2 protein_coding protein_coding MGP_BALBcJ_T0041530.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75354565 75369656 - MGP_BALBcJ_P0041530 Txn2 protein_coding protein_coding MGP_BALBcJ_T0041531.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75358867 75368421 - MGP_BALBcJ_P0041531 Txn2 protein_coding protein_coding MGP_BALBcJ_T0041532.1 MGP_BALBcJ_G0022000.1 mouse_genomes_project 15 75363716 75369662 - MGP_BALBcJ_P0041532 Txn2 protein_coding protein_coding MGP_BALBcJ_T0042238.1 MGP_BALBcJ_G0022208.1 mouse_genomes_project 15 88061463 88067707 + MGP_BALBcJ_P0042238 Alg10b protein_coding protein_coding MGP_BALBcJ_T0010054.1 MGP_BALBcJ_G0008179.1 mouse_genomes_project 15 80310803 80310863 - Gm27742 miRNA miRNA MGP_BALBcJ_T0100744.1 MGP_BALBcJ_G0038780.1 mouse_genomes_project 15 31512358 31512490 - Gm24523 snoRNA snoRNA MGP_BALBcJ_T0040740.1 MGP_BALBcJ_G0021752.1 mouse_genomes_project 15 31950338 32220961 - MGP_BALBcJ_P0040740 Stk3 protein_coding protein_coding MGP_BALBcJ_T0040741.1 MGP_BALBcJ_G0021752.1 mouse_genomes_project 15 31950515 32220905 - MGP_BALBcJ_P0040741 Stk3 protein_coding protein_coding MGP_BALBcJ_T0040742.1 MGP_BALBcJ_G0021752.1 mouse_genomes_project 15 32035223 32073929 - Stk3 protein_coding retained_intron MGP_BALBcJ_T0040743.1 MGP_BALBcJ_G0021752.1 mouse_genomes_project 15 32145544 32220824 - MGP_BALBcJ_P0040743 Stk3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040801.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35046854 35086417 - MGP_BALBcJ_P0040801 Rrm2b protein_coding protein_coding MGP_BALBcJ_T0040802.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35050138 35086205 - MGP_BALBcJ_P0040802 Rrm2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040803.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35050138 35086205 - MGP_BALBcJ_P0040803 Rrm2b protein_coding protein_coding MGP_BALBcJ_T0040804.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35050138 35086205 - MGP_BALBcJ_P0040804 Rrm2b protein_coding protein_coding MGP_BALBcJ_T0040805.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35057262 35086243 - MGP_BALBcJ_P0040805 Rrm2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040806.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35070578 35080456 - Rrm2b protein_coding retained_intron MGP_BALBcJ_T0040807.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35070683 35086163 - MGP_BALBcJ_P0040807 Rrm2b protein_coding protein_coding MGP_BALBcJ_T0040808.1 MGP_BALBcJ_G0021771.1 mouse_genomes_project 15 35072282 35086632 - MGP_BALBcJ_P0040808 Rrm2b protein_coding protein_coding MGP_BALBcJ_T0041664.1 MGP_BALBcJ_G0022039.1 mouse_genomes_project 15 76858703 76870264 + MGP_BALBcJ_P0041664 Maff protein_coding protein_coding MGP_BALBcJ_T0041665.1 MGP_BALBcJ_G0022039.1 mouse_genomes_project 15 76859223 76870264 + MGP_BALBcJ_P0041665 Maff protein_coding protein_coding MGP_BALBcJ_T0100767.1 MGP_BALBcJ_G0038803.1 mouse_genomes_project 15 82098422 82098566 - Gm22890 snoRNA snoRNA MGP_BALBcJ_T0013060.1 MGP_BALBcJ_G0011157.1 mouse_genomes_project 15 73269045 73270321 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003603.1 MGP_BALBcJ_G0003265.1 mouse_genomes_project 15 83892252 83895169 - Gm15722 antisense antisense MGP_BALBcJ_T0013052.1 MGP_BALBcJ_G0011149.1 mouse_genomes_project 15 60112564 60114492 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042137.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86944922 86950490 - Hdac10 protein_coding processed_transcript MGP_BALBcJ_T0042138.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86944922 86950537 - MGP_BALBcJ_P0042138 Hdac10 protein_coding protein_coding MGP_BALBcJ_T0042139.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86944924 86950498 - Hdac10 protein_coding retained_intron MGP_BALBcJ_T0042140.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86944924 86950488 - Hdac10 protein_coding retained_intron MGP_BALBcJ_T0042141.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86944926 86950516 - Hdac10 protein_coding retained_intron MGP_BALBcJ_T0042142.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86945187 86950285 - MGP_BALBcJ_P0042142 Hdac10 protein_coding protein_coding MGP_BALBcJ_T0042143.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86945289 86947522 - Hdac10 protein_coding processed_transcript MGP_BALBcJ_T0042144.1 MGP_BALBcJ_G0022183.1 mouse_genomes_project 15 86947815 86949327 - Hdac10 protein_coding processed_transcript MGP_BALBcJ_T0040861.1 MGP_BALBcJ_G0021798.1 mouse_genomes_project 15 41515027 41649220 + MGP_BALBcJ_P0040861 Pkhd1l1 protein_coding protein_coding MGP_BALBcJ_T0040862.1 MGP_BALBcJ_G0021798.1 mouse_genomes_project 15 41515027 41649226 + MGP_BALBcJ_P0040862 Pkhd1l1 protein_coding protein_coding MGP_BALBcJ_T0042444.1 MGP_BALBcJ_G0022279.1 mouse_genomes_project 15 96816926 96856734 - MGP_BALBcJ_P0042444 Kmt2d protein_coding unknown_likely_coding MGP_BALBcJ_T0042445.1 MGP_BALBcJ_G0022279.1 mouse_genomes_project 15 96816927 96856609 - MGP_BALBcJ_P0042445 Kmt2d protein_coding protein_coding MGP_BALBcJ_T0042446.1 MGP_BALBcJ_G0022279.1 mouse_genomes_project 15 96816930 96856629 - MGP_BALBcJ_P0042446 Kmt2d protein_coding protein_coding MGP_BALBcJ_T0042447.1 MGP_BALBcJ_G0022279.1 mouse_genomes_project 15 96819545 96822366 - MGP_BALBcJ_P0042447 Kmt2d protein_coding protein_coding MGP_BALBcJ_T0042448.1 MGP_BALBcJ_G0022279.1 mouse_genomes_project 15 96840012 96841608 - MGP_BALBcJ_P0042448 Kmt2d protein_coding protein_coding MGP_BALBcJ_T0040433.1 MGP_BALBcJ_G0021654.1 mouse_genomes_project 15 1565761 1637530 + MGP_BALBcJ_P0040433 C6 protein_coding protein_coding MGP_BALBcJ_T0040434.1 MGP_BALBcJ_G0021654.1 mouse_genomes_project 15 1565802 1597724 + MGP_BALBcJ_P0040434 C6 protein_coding protein_coding MGP_BALBcJ_T0040435.1 MGP_BALBcJ_G0021654.1 mouse_genomes_project 15 1565802 1637127 + MGP_BALBcJ_P0040435 C6 protein_coding protein_coding MGP_BALBcJ_T0040436.1 MGP_BALBcJ_G0021654.1 mouse_genomes_project 15 1565870 1649640 + MGP_BALBcJ_P0040436 C6 protein_coding protein_coding MGP_BALBcJ_T0040437.1 MGP_BALBcJ_G0021654.1 mouse_genomes_project 15 1576840 1625154 + MGP_BALBcJ_P0040437 C6 protein_coding unknown_likely_coding MGP_BALBcJ_T0040438.1 MGP_BALBcJ_G0021654.1 mouse_genomes_project 15 1604011 1625061 + C6 protein_coding processed_transcript MGP_BALBcJ_T0041039.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975720 62980039 + Efr3a protein_coding processed_transcript MGP_BALBcJ_T0041040.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975726 63063290 + MGP_BALBcJ_P0041040 Efr3a protein_coding protein_coding MGP_BALBcJ_T0041041.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975727 62979522 + Efr3a protein_coding processed_transcript MGP_BALBcJ_T0041042.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975727 63058725 + MGP_BALBcJ_P0041042 Efr3a protein_coding protein_coding MGP_BALBcJ_T0041043.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975728 63018649 + Efr3a protein_coding processed_transcript MGP_BALBcJ_T0041044.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975732 63014308 + MGP_BALBcJ_P0041044 Efr3a protein_coding protein_coding MGP_BALBcJ_T0041045.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975734 63011381 + Efr3a protein_coding retained_intron MGP_BALBcJ_T0041046.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62975734 63008704 + MGP_BALBcJ_P0041046 Efr3a protein_coding protein_coding MGP_BALBcJ_T0041047.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 62976526 62979528 + Efr3a protein_coding processed_transcript MGP_BALBcJ_T0041048.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 63039986 63045871 + Efr3a protein_coding retained_intron MGP_BALBcJ_T0041049.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 63044540 63046775 + Efr3a protein_coding retained_intron MGP_BALBcJ_T0041050.1 MGP_BALBcJ_G0021866.1 mouse_genomes_project 15 63046546 63056221 + Efr3a protein_coding retained_intron MGP_BALBcJ_T0100774.1 MGP_BALBcJ_G0038810.1 mouse_genomes_project 15 97248104 97248237 - Gm25999 snoRNA snoRNA MGP_BALBcJ_T0042434.1 MGP_BALBcJ_G0022272.1 mouse_genomes_project 15 96689236 96704300 + MGP_BALBcJ_P0042434 Ccdc65 protein_coding protein_coding MGP_BALBcJ_T0006759.1 MGP_BALBcJ_G0005571.1 mouse_genomes_project 15 72251716 72254592 - Gm28502 lincRNA lincRNA MGP_BALBcJ_T0006730.1 MGP_BALBcJ_G0005554.1 mouse_genomes_project 15 29308412 29312492 - Snhg18 lincRNA lincRNA MGP_BALBcJ_T0099466.1 MGP_BALBcJ_G0037502.1 mouse_genomes_project 15 50541342 50541408 + Gm27926 snRNA snRNA MGP_BALBcJ_T0100740.1 MGP_BALBcJ_G0038776.1 mouse_genomes_project 15 28240324 28240458 - Gm26416 snoRNA snoRNA MGP_BALBcJ_T0041880.1 MGP_BALBcJ_G0022096.1 mouse_genomes_project 15 79603366 79626986 - MGP_BALBcJ_P0041880 Desi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041881.1 MGP_BALBcJ_G0022096.1 mouse_genomes_project 15 79603366 79626996 - MGP_BALBcJ_P0041881 Desi1 protein_coding protein_coding MGP_BALBcJ_T0041882.1 MGP_BALBcJ_G0022096.1 mouse_genomes_project 15 79604690 79627058 - MGP_BALBcJ_P0041882 Desi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041883.1 MGP_BALBcJ_G0022096.1 mouse_genomes_project 15 79605488 79644675 - Desi1 protein_coding processed_transcript MGP_BALBcJ_T0041884.1 MGP_BALBcJ_G0022096.1 mouse_genomes_project 15 79605501 79626844 - MGP_BALBcJ_P0041884 Desi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041885.1 MGP_BALBcJ_G0022096.1 mouse_genomes_project 15 79605564 79626870 - MGP_BALBcJ_P0041885 Desi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040610.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9198801 9431134 - MGP_BALBcJ_P0040610 Pdzd2 protein_coding protein_coding MGP_BALBcJ_T0040611.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9237373 9240205 - Pdzd2 protein_coding retained_intron MGP_BALBcJ_T0040612.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9243830 9251617 - Pdzd2 protein_coding retained_intron MGP_BALBcJ_T0040613.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9246180 9385285 - MGP_BALBcJ_P0040613 Pdzd2 protein_coding protein_coding MGP_BALBcJ_T0040614.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9283338 9582092 - Pdzd2 protein_coding retained_intron MGP_BALBcJ_T0040615.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9298103 9333444 - MGP_BALBcJ_P0040615 Pdzd2 protein_coding protein_coding MGP_BALBcJ_T0040616.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9298143 9385884 - MGP_BALBcJ_P0040616 Pdzd2 protein_coding protein_coding MGP_BALBcJ_T0040617.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9362817 9385792 - Pdzd2 protein_coding processed_transcript MGP_BALBcJ_T0040618.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9380962 9385288 - Pdzd2 protein_coding retained_intron MGP_BALBcJ_T0040619.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9385069 9386239 - Pdzd2 protein_coding retained_intron MGP_BALBcJ_T0040620.1 MGP_BALBcJ_G0021705.1 mouse_genomes_project 15 9427092 9437328 - Pdzd2 protein_coding processed_transcript MGP_BALBcJ_T0042084.1 MGP_BALBcJ_G0022167.1 mouse_genomes_project 15 83945682 83970059 - Cerk protein_coding retained_intron MGP_BALBcJ_T0042085.1 MGP_BALBcJ_G0022167.1 mouse_genomes_project 15 83945683 83997333 - MGP_BALBcJ_P0042085 Cerk protein_coding protein_coding MGP_BALBcJ_T0042086.1 MGP_BALBcJ_G0022167.1 mouse_genomes_project 15 83946874 83961354 - MGP_BALBcJ_P0042086 Cerk protein_coding protein_coding MGP_BALBcJ_T0040977.1 MGP_BALBcJ_G0021840.1 mouse_genomes_project 15 55564688 55608089 + MGP_BALBcJ_P0040977 Fam91a1 protein_coding protein_coding MGP_BALBcJ_T0040843.1 MGP_BALBcJ_G0021788.1 mouse_genomes_project 15 38504094 38931212 + MGP_BALBcJ_P0040843 Oxr1 protein_coding protein_coding MGP_BALBcJ_T0040844.1 MGP_BALBcJ_G0021788.1 mouse_genomes_project 15 38854474 38931212 + MGP_BALBcJ_P0040844 Oxr1 protein_coding protein_coding MGP_BALBcJ_T0040845.1 MGP_BALBcJ_G0021788.1 mouse_genomes_project 15 38854474 38931217 + MGP_BALBcJ_P0040845 Oxr1 protein_coding protein_coding MGP_BALBcJ_T0040846.1 MGP_BALBcJ_G0021788.1 mouse_genomes_project 15 38854955 38931212 + MGP_BALBcJ_P0040846 Oxr1 protein_coding protein_coding MGP_BALBcJ_T0040847.1 MGP_BALBcJ_G0021788.1 mouse_genomes_project 15 38854963 38931215 + MGP_BALBcJ_P0040847 Oxr1 protein_coding protein_coding MGP_BALBcJ_T0040848.1 MGP_BALBcJ_G0021788.1 mouse_genomes_project 15 38902757 38931212 + MGP_BALBcJ_P0040848 Oxr1 protein_coding protein_coding MGP_BALBcJ_T0042570.1 MGP_BALBcJ_G0022318.1 mouse_genomes_project 15 98514600 98524880 + MGP_BALBcJ_P0042570 Letmd1 protein_coding protein_coding MGP_BALBcJ_T0040538.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6405896 6581049 - MGP_BALBcJ_P0040538 protein_coding protein_coding MGP_BALBcJ_T0040539.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6405965 6580980 - MGP_BALBcJ_P0040539 protein_coding unknown_likely_coding MGP_BALBcJ_T0040540.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6405965 6580980 - MGP_BALBcJ_P0040540 protein_coding unknown_likely_coding MGP_BALBcJ_T0040541.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6490693 6581079 - MGP_BALBcJ_P0040541 protein_coding protein_coding MGP_BALBcJ_T0040542.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6516169 6581031 - MGP_BALBcJ_P0040542 protein_coding protein_coding MGP_BALBcJ_T0040543.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6536163 6581031 - MGP_BALBcJ_P0040543 protein_coding protein_coding MGP_BALBcJ_T0040544.1 MGP_BALBcJ_G0021684.1 mouse_genomes_project 15 6536166 6580988 - MGP_BALBcJ_P0040544 protein_coding protein_coding MGP_BALBcJ_T0042469.1 MGP_BALBcJ_G0022291.1 mouse_genomes_project 15 97264182 97280848 - MGP_BALBcJ_P0042469 Fam186b protein_coding protein_coding MGP_BALBcJ_T0042765.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100646486 100742432 - MGP_BALBcJ_P0042765 protein_coding protein_coding MGP_BALBcJ_T0042766.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100649052 100742809 - MGP_BALBcJ_P0042766 protein_coding protein_coding MGP_BALBcJ_T0042767.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100649052 100649442 - MGP_BALBcJ_P0042767 protein_coding protein_coding MGP_BALBcJ_T0042768.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100653988 100742798 - MGP_BALBcJ_P0042768 protein_coding protein_coding MGP_BALBcJ_T0042769.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100657059 100742812 - MGP_BALBcJ_P0042769 protein_coding protein_coding MGP_BALBcJ_T0042770.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100657739 100742447 - MGP_BALBcJ_P0042770 protein_coding protein_coding MGP_BALBcJ_T0042771.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100666149 100742797 - protein_coding retained_intron MGP_BALBcJ_T0042772.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100668213 100742823 - MGP_BALBcJ_P0042772 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042773.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100668265 100742281 - MGP_BALBcJ_P0042773 protein_coding protein_coding MGP_BALBcJ_T0042774.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100671289 100742426 - MGP_BALBcJ_P0042774 protein_coding protein_coding MGP_BALBcJ_T0042775.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100671289 100742805 - MGP_BALBcJ_P0042775 protein_coding protein_coding MGP_BALBcJ_T0042776.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100682876 100742429 - protein_coding retained_intron MGP_BALBcJ_T0042777.1 MGP_BALBcJ_G0022387.1 mouse_genomes_project 15 100716629 100742823 - protein_coding retained_intron MGP_BALBcJ_T0011359.1 MGP_BALBcJ_G0009484.1 mouse_genomes_project 15 3339752 3340028 + Gm23218 misc_RNA misc_RNA MGP_BALBcJ_T0042596.1 MGP_BALBcJ_G0022327.1 mouse_genomes_project 15 98814353 98827841 + MGP_BALBcJ_P0042596 Slc4a8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042597.1 MGP_BALBcJ_G0022327.1 mouse_genomes_project 15 98814372 98827720 + Slc4a8 protein_coding retained_intron MGP_BALBcJ_T0042598.1 MGP_BALBcJ_G0022327.1 mouse_genomes_project 15 98814414 98868867 + MGP_BALBcJ_P0042598 Slc4a8 protein_coding protein_coding MGP_BALBcJ_T0042599.1 MGP_BALBcJ_G0022327.1 mouse_genomes_project 15 98855984 98859524 + Slc4a8 protein_coding retained_intron MGP_BALBcJ_T0042600.1 MGP_BALBcJ_G0022327.1 mouse_genomes_project 15 98865424 98869266 + Slc4a8 protein_coding processed_transcript MGP_BALBcJ_T0042601.1 MGP_BALBcJ_G0022327.1 mouse_genomes_project 15 98867589 98869036 + Slc4a8 protein_coding retained_intron MGP_BALBcJ_T0013025.1 MGP_BALBcJ_G0011122.1 mouse_genomes_project 15 4165828 4166431 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040537.1 MGP_BALBcJ_G0021683.1 mouse_genomes_project 15 6340975 6367879 - MGP_BALBcJ_P0040537 Il7r protein_coding protein_coding MGP_BALBcJ_T0041747.1 MGP_BALBcJ_G0022060.1 mouse_genomes_project 15 77630826 77653689 + MGP_BALBcJ_P0041747 Syngr1 protein_coding protein_coding MGP_BALBcJ_T0041748.1 MGP_BALBcJ_G0022060.1 mouse_genomes_project 15 77630836 77659749 + MGP_BALBcJ_P0041748 Syngr1 protein_coding protein_coding MGP_BALBcJ_T0041749.1 MGP_BALBcJ_G0022060.1 mouse_genomes_project 15 77637774 77651910 + MGP_BALBcJ_P0041749 Syngr1 protein_coding protein_coding MGP_BALBcJ_T0041750.1 MGP_BALBcJ_G0022060.1 mouse_genomes_project 15 77655720 77656513 + MGP_BALBcJ_P0041750 Syngr1 protein_coding protein_coding MGP_BALBcJ_T0010073.1 MGP_BALBcJ_G0008198.1 mouse_genomes_project 15 98699776 98699843 - Mir6961 miRNA miRNA MGP_BALBcJ_T0011381.1 MGP_BALBcJ_G0009506.1 mouse_genomes_project 15 101076148 101076305 + Gm27535 misc_RNA misc_RNA MGP_BALBcJ_T0040984.1 MGP_BALBcJ_G0021845.1 mouse_genomes_project 15 56042702 56055864 + MGP_BALBcJ_P0040984 Rnf139 protein_coding protein_coding MGP_BALBcJ_T0042742.1 MGP_BALBcJ_G0022383.1 mouse_genomes_project 15 100623546 100623711 + MGP_BALBcJ_P0042742 Gm10337 protein_coding protein_coding MGP_BALBcJ_T0042559.1 MGP_BALBcJ_G0022315.1 mouse_genomes_project 15 98334520 98350713 + MGP_BALBcJ_P0042559 protein_coding protein_coding MGP_BALBcJ_T0010056.1 MGP_BALBcJ_G0008181.1 mouse_genomes_project 15 80499059 80499119 - Gm27618 miRNA miRNA MGP_BALBcJ_T0042063.1 MGP_BALBcJ_G0022161.1 mouse_genomes_project 15 83608723 83615787 - MGP_BALBcJ_P0042063 Pkdrej protein_coding protein_coding MGP_BALBcJ_T0041327.1 MGP_BALBcJ_G0021947.1 mouse_genomes_project 15 73582026 73606364 + MGP_BALBcJ_P0041327 Spatc1 protein_coding protein_coding MGP_BALBcJ_T0041574.1 MGP_BALBcJ_G0022018.1 mouse_genomes_project 15 76233354 76250907 - MGP_BALBcJ_P0041574 Mfng protein_coding protein_coding MGP_BALBcJ_T0041575.1 MGP_BALBcJ_G0022018.1 mouse_genomes_project 15 76237951 76244618 - Mfng protein_coding retained_intron MGP_BALBcJ_T0041576.1 MGP_BALBcJ_G0022018.1 mouse_genomes_project 15 76241327 76244592 - Mfng protein_coding retained_intron MGP_BALBcJ_T0041577.1 MGP_BALBcJ_G0022018.1 mouse_genomes_project 15 76244293 76249328 - Mfng protein_coding processed_transcript MGP_BALBcJ_T0006747.1 MGP_BALBcJ_G0005568.1 mouse_genomes_project 15 52099432 52111113 + Gm26684 lincRNA lincRNA MGP_BALBcJ_T0042622.1 MGP_BALBcJ_G0022329.1 mouse_genomes_project 15 99108549 99113025 - MGP_BALBcJ_P0042622 Fignl2 protein_coding protein_coding MGP_BALBcJ_T0042568.1 MGP_BALBcJ_G0022317.1 mouse_genomes_project 15 98468473 98473791 + MGP_BALBcJ_P0042568 Gm5475 protein_coding protein_coding MGP_BALBcJ_T0042569.1 MGP_BALBcJ_G0022317.1 mouse_genomes_project 15 98469519 98474466 + MGP_BALBcJ_P0042569 Gm5475 protein_coding protein_coding MGP_BALBcJ_T0042485.1 MGP_BALBcJ_G0022293.1 mouse_genomes_project 15 97313163 97366660 - MGP_BALBcJ_P0042485 Fmnl3 protein_coding protein_coding MGP_BALBcJ_T0042486.1 MGP_BALBcJ_G0022293.1 mouse_genomes_project 15 97313163 97366627 - MGP_BALBcJ_P0042486 Fmnl3 protein_coding protein_coding MGP_BALBcJ_T0042487.1 MGP_BALBcJ_G0022293.1 mouse_genomes_project 15 97313163 97366627 - MGP_BALBcJ_P0042487 Fmnl3 protein_coding protein_coding MGP_BALBcJ_T0042488.1 MGP_BALBcJ_G0022293.1 mouse_genomes_project 15 97320324 97321591 - Fmnl3 protein_coding retained_intron MGP_BALBcJ_T0042489.1 MGP_BALBcJ_G0022293.1 mouse_genomes_project 15 97323768 97331653 - Fmnl3 protein_coding processed_transcript MGP_BALBcJ_T0042834.1 MGP_BALBcJ_G0022412.1 mouse_genomes_project 15 101693050 101695367 - MGP_BALBcJ_P0042834 Glycam1 protein_coding protein_coding MGP_BALBcJ_T0010040.1 MGP_BALBcJ_G0008165.1 mouse_genomes_project 15 76887040 76887113 - Mir1943 miRNA miRNA MGP_BALBcJ_T0042347.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95757000 95795672 - MGP_BALBcJ_P0042347 Hdac7 protein_coding protein_coding MGP_BALBcJ_T0042348.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95757017 95795945 - MGP_BALBcJ_P0042348 Hdac7 protein_coding protein_coding MGP_BALBcJ_T0042349.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95757023 95758782 - Hdac7 protein_coding retained_intron MGP_BALBcJ_T0042350.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95757045 95795672 - MGP_BALBcJ_P0042350 Hdac7 protein_coding protein_coding MGP_BALBcJ_T0042351.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95758033 95795555 - MGP_BALBcJ_P0042351 Hdac7 protein_coding protein_coding MGP_BALBcJ_T0042352.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95762135 95795647 - MGP_BALBcJ_P0042352 Hdac7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042353.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95763945 95771844 - MGP_BALBcJ_P0042353 Hdac7 protein_coding protein_coding MGP_BALBcJ_T0042354.1 MGP_BALBcJ_G0022245.1 mouse_genomes_project 15 95765618 95772195 - MGP_BALBcJ_P0042354 Hdac7 protein_coding protein_coding MGP_BALBcJ_T0042820.1 MGP_BALBcJ_G0022406.1 mouse_genomes_project 15 101472787 101500846 - MGP_BALBcJ_P0042820 Itga5 protein_coding protein_coding MGP_BALBcJ_T0042571.1 MGP_BALBcJ_G0022319.1 mouse_genomes_project 15 98525197 98540863 - MGP_BALBcJ_P0042571 Csrnp2 protein_coding protein_coding MGP_BALBcJ_T0017431.1 MGP_BALBcJ_G0015241.1 mouse_genomes_project 15 75567208 75592573 + A730060N03Rik processed_transcript processed_transcript MGP_BALBcJ_T0098328.1 MGP_BALBcJ_G0036382.1 mouse_genomes_project 15 41917920 41919596 + pseudogene pseudogene MGP_BALBcJ_T0040648.1 MGP_BALBcJ_G0021716.1 mouse_genomes_project 15 22499935 22500588 + MGP_BALBcJ_P0040648 Gm5468 protein_coding protein_coding MGP_BALBcJ_T0010083.1 MGP_BALBcJ_G0008208.1 mouse_genomes_project 15 101100022 101100107 + Mir196a-2 miRNA miRNA MGP_BALBcJ_T0042790.1 MGP_BALBcJ_G0022394.1 mouse_genomes_project 15 101094130 101142895 + Hoxc5 protein_coding processed_transcript MGP_BALBcJ_T0042798.1 MGP_BALBcJ_G0022394.1 mouse_genomes_project 15 101141033 101144648 + MGP_BALBcJ_P0042798 Hoxc5 protein_coding protein_coding MGP_BALBcJ_T0042490.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392071 97409190 + MGP_BALBcJ_P0042490 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042491.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392175 97407775 + MGP_BALBcJ_P0042491 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042492.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392175 97407677 + MGP_BALBcJ_P0042492 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042493.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392211 97407632 + MGP_BALBcJ_P0042493 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042494.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392408 97407676 + MGP_BALBcJ_P0042494 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042495.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392782 97405816 + MGP_BALBcJ_P0042495 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042496.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97392800 97407751 + MGP_BALBcJ_P0042496 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042497.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97400225 97401243 + MGP_BALBcJ_P0042497 Tmbim6 protein_coding protein_coding MGP_BALBcJ_T0042498.1 MGP_BALBcJ_G0022294.1 mouse_genomes_project 15 97405012 97407932 + Tmbim6 protein_coding retained_intron MGP_BALBcJ_T0042830.1 MGP_BALBcJ_G0022408.1 mouse_genomes_project 15 101566258 101575725 - MGP_BALBcJ_P0042830 BC048502 protein_coding protein_coding MGP_BALBcJ_T0101636.1 MGP_BALBcJ_G0039642.1 mouse_genomes_project 15 56462986 56467966 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101637.1 MGP_BALBcJ_G0039642.1 mouse_genomes_project 15 56466806 56467883 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0041471.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74036734 74129979 - MGP_BALBcJ_P0041471 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041472.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74036734 74130066 - MGP_BALBcJ_P0041472 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041473.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74037609 74038353 - Arhgap39 protein_coding retained_intron MGP_BALBcJ_T0041474.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74046464 74130025 - Arhgap39 protein_coding retained_intron MGP_BALBcJ_T0041475.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74064642 74105777 - MGP_BALBcJ_P0041475 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041476.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74071006 74130002 - MGP_BALBcJ_P0041476 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041477.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74071010 74129892 - MGP_BALBcJ_P0041477 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041478.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74077969 74130037 - Arhgap39 protein_coding retained_intron MGP_BALBcJ_T0041479.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74078418 74129866 - MGP_BALBcJ_P0041479 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041480.1 MGP_BALBcJ_G0021979.1 mouse_genomes_project 15 74078434 74129972 - MGP_BALBcJ_P0041480 Arhgap39 protein_coding protein_coding MGP_BALBcJ_T0041013.1 MGP_BALBcJ_G0021860.1 mouse_genomes_project 15 61022265 61043451 - MGP_BALBcJ_P0041013 protein_coding protein_coding MGP_BALBcJ_T0041014.1 MGP_BALBcJ_G0021860.1 mouse_genomes_project 15 61022266 61033805 - MGP_BALBcJ_P0041014 protein_coding protein_coding MGP_BALBcJ_T0099044.1 MGP_BALBcJ_G0037084.1 mouse_genomes_project 15 55935711 55937202 - Gm20712 sense_overlapping sense_overlapping MGP_BALBcJ_T0017408.1 MGP_BALBcJ_G0015231.1 mouse_genomes_project 15 34542720 34553988 - Gm15941 processed_transcript processed_transcript MGP_BALBcJ_T0017409.1 MGP_BALBcJ_G0015231.1 mouse_genomes_project 15 34543698 34550193 - Gm15941 processed_transcript processed_transcript MGP_BALBcJ_T0017410.1 MGP_BALBcJ_G0015231.1 mouse_genomes_project 15 34543889 34553472 - Gm15941 processed_transcript processed_transcript MGP_BALBcJ_T0017411.1 MGP_BALBcJ_G0015231.1 mouse_genomes_project 15 34544005 34553986 - Gm15941 processed_transcript processed_transcript MGP_BALBcJ_T0017412.1 MGP_BALBcJ_G0015231.1 mouse_genomes_project 15 34544158 34553977 - Gm15941 processed_transcript processed_transcript MGP_BALBcJ_T0017413.1 MGP_BALBcJ_G0015231.1 mouse_genomes_project 15 34548720 34554738 - Gm15941 processed_transcript processed_transcript MGP_BALBcJ_T0041515.1 MGP_BALBcJ_G0021997.1 mouse_genomes_project 15 75174057 75181543 + MGP_BALBcJ_P0041515 Apol9b protein_coding protein_coding MGP_BALBcJ_T0099457.1 MGP_BALBcJ_G0037493.1 mouse_genomes_project 15 33293321 33293384 + Gm23754 snRNA snRNA MGP_BALBcJ_T0041320.1 MGP_BALBcJ_G0021945.1 mouse_genomes_project 15 73538972 73541522 - MGP_BALBcJ_P0041320 Parp10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041321.1 MGP_BALBcJ_G0021945.1 mouse_genomes_project 15 73540801 73551875 - Parp10 protein_coding retained_intron MGP_BALBcJ_T0041322.1 MGP_BALBcJ_G0021945.1 mouse_genomes_project 15 73540801 73551861 - MGP_BALBcJ_P0041322 Parp10 protein_coding protein_coding MGP_BALBcJ_T0041323.1 MGP_BALBcJ_G0021945.1 mouse_genomes_project 15 73540801 73551882 - MGP_BALBcJ_P0041323 Parp10 protein_coding protein_coding MGP_BALBcJ_T0041324.1 MGP_BALBcJ_G0021945.1 mouse_genomes_project 15 73541188 73542052 - Parp10 protein_coding processed_transcript MGP_BALBcJ_T0041325.1 MGP_BALBcJ_G0021945.1 mouse_genomes_project 15 73541537 73542272 - Parp10 protein_coding retained_intron MGP_BALBcJ_T0040746.1 MGP_BALBcJ_G0021755.1 mouse_genomes_project 15 33006562 33015990 - MGP_BALBcJ_P0040746 Cox6c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040747.1 MGP_BALBcJ_G0021755.1 mouse_genomes_project 15 33012652 33018905 - MGP_BALBcJ_P0040747 Cox6c protein_coding protein_coding MGP_BALBcJ_T0040748.1 MGP_BALBcJ_G0021755.1 mouse_genomes_project 15 33012656 33018304 - MGP_BALBcJ_P0040748 Cox6c protein_coding protein_coding MGP_BALBcJ_T0040749.1 MGP_BALBcJ_G0021755.1 mouse_genomes_project 15 33012659 33018866 - Cox6c protein_coding retained_intron MGP_BALBcJ_T0040750.1 MGP_BALBcJ_G0021755.1 mouse_genomes_project 15 33016045 33018668 - MGP_BALBcJ_P0040750 Cox6c protein_coding protein_coding MGP_BALBcJ_T0041110.1 MGP_BALBcJ_G0021884.1 mouse_genomes_project 15 70214224 70217850 + MGP_BALBcJ_P0041110 Chrac1 protein_coding protein_coding MGP_BALBcJ_T0041111.1 MGP_BALBcJ_G0021884.1 mouse_genomes_project 15 70214224 70221327 + MGP_BALBcJ_P0041111 Chrac1 protein_coding protein_coding MGP_BALBcJ_T0041112.1 MGP_BALBcJ_G0021884.1 mouse_genomes_project 15 70214244 70218549 + Chrac1 protein_coding retained_intron MGP_BALBcJ_T0010051.1 MGP_BALBcJ_G0008176.1 mouse_genomes_project 15 80235705 80235765 - Gm27825 miRNA miRNA MGP_BALBcJ_T0040783.1 MGP_BALBcJ_G0021768.1 mouse_genomes_project 15 34354377 34486013 + MGP_BALBcJ_P0040783 Grhl2 protein_coding protein_coding MGP_BALBcJ_T0040784.1 MGP_BALBcJ_G0021768.1 mouse_genomes_project 15 34354377 34457251 + MGP_BALBcJ_P0040784 Grhl2 protein_coding protein_coding MGP_BALBcJ_T0040785.1 MGP_BALBcJ_G0021768.1 mouse_genomes_project 15 34354399 34402274 + MGP_BALBcJ_P0040785 Grhl2 protein_coding protein_coding MGP_BALBcJ_T0040786.1 MGP_BALBcJ_G0021768.1 mouse_genomes_project 15 34441332 34486006 + Grhl2 protein_coding processed_transcript MGP_BALBcJ_T0040787.1 MGP_BALBcJ_G0021768.1 mouse_genomes_project 15 34459340 34483384 + MGP_BALBcJ_P0040787 Grhl2 protein_coding protein_coding MGP_BALBcJ_T0042593.1 MGP_BALBcJ_G0022326.1 mouse_genomes_project 15 98743296 98780823 - MGP_BALBcJ_P0042593 Galnt6 protein_coding protein_coding MGP_BALBcJ_T0042594.1 MGP_BALBcJ_G0022326.1 mouse_genomes_project 15 98743298 98780823 - MGP_BALBcJ_P0042594 Galnt6 protein_coding protein_coding MGP_BALBcJ_T0042595.1 MGP_BALBcJ_G0022326.1 mouse_genomes_project 15 98744347 98772228 - MGP_BALBcJ_P0042595 Galnt6 protein_coding protein_coding MGP_BALBcJ_T0040664.1 MGP_BALBcJ_G0021719.1 mouse_genomes_project 15 23075201 23089318 + MGP_BALBcJ_P0040664 Zfp622 protein_coding protein_coding MGP_BALBcJ_T0041203.1 MGP_BALBcJ_G0021913.1 mouse_genomes_project 15 72357493 72359484 + MGP_BALBcJ_P0041203 Ly6g protein_coding protein_coding MGP_BALBcJ_T0041690.1 MGP_BALBcJ_G0022048.1 mouse_genomes_project 15 77215333 77217096 + MGP_BALBcJ_P0041690 Tomm22 protein_coding protein_coding MGP_BALBcJ_T0041691.1 MGP_BALBcJ_G0022048.1 mouse_genomes_project 15 77215563 77216903 + Tomm22 protein_coding processed_transcript MGP_BALBcJ_T0000934.1 MGP_BALBcJ_G0000865.1 mouse_genomes_project 15 65483577 65488832 - TEC TEC MGP_BALBcJ_T0003593.1 MGP_BALBcJ_G0003259.1 mouse_genomes_project 15 76393312 76395021 - 1700027A07Rik antisense antisense MGP_BALBcJ_T0099476.1 MGP_BALBcJ_G0037512.1 mouse_genomes_project 15 69607843 69607905 - Gm24390 snRNA snRNA MGP_BALBcJ_T0041413.1 MGP_BALBcJ_G0021965.1 mouse_genomes_project 15 73857547 73860735 + MGP_BALBcJ_P0041413 Slc52a2 protein_coding protein_coding MGP_BALBcJ_T0040987.1 MGP_BALBcJ_G0021848.1 mouse_genomes_project 15 56093885 56125310 - MGP_BALBcJ_P0040987 Mtss1 protein_coding unknown_likely_coding MGP_BALBcJ_T0040988.1 MGP_BALBcJ_G0021848.1 mouse_genomes_project 15 56093899 56235461 - MGP_BALBcJ_P0040988 Mtss1 protein_coding protein_coding MGP_BALBcJ_T0042361.1 MGP_BALBcJ_G0022247.1 mouse_genomes_project 15 95931119 95937184 + MGP_BALBcJ_P0042361 Tmem106c protein_coding unknown_likely_coding MGP_BALBcJ_T0000936.1 MGP_BALBcJ_G0000867.1 mouse_genomes_project 15 79173272 79174127 - TEC TEC MGP_BALBcJ_T0042466.1 MGP_BALBcJ_G0022288.1 mouse_genomes_project 15 97119807 97207427 + MGP_BALBcJ_P0042466 Spats2 protein_coding protein_coding MGP_BALBcJ_T0010076.1 MGP_BALBcJ_G0008201.1 mouse_genomes_project 15 99650533 99650671 + Gm44393 miRNA miRNA MGP_BALBcJ_T0006738.1 MGP_BALBcJ_G0005562.1 mouse_genomes_project 15 38818389 38854352 - Gm26854 lincRNA lincRNA MGP_BALBcJ_T0042585.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98691783 98719949 - MGP_BALBcJ_P0042585 Bin2 protein_coding protein_coding MGP_BALBcJ_T0042586.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98691789 98719901 - MGP_BALBcJ_P0042586 Bin2 protein_coding protein_coding MGP_BALBcJ_T0042587.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98691789 98719923 - MGP_BALBcJ_P0042587 Bin2 protein_coding protein_coding MGP_BALBcJ_T0042588.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98696690 98719901 - MGP_BALBcJ_P0042588 Bin2 protein_coding protein_coding MGP_BALBcJ_T0042589.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98696786 98719921 - MGP_BALBcJ_P0042589 Bin2 protein_coding protein_coding MGP_BALBcJ_T0042590.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98696828 98702185 - Bin2 protein_coding processed_transcript MGP_BALBcJ_T0042591.1 MGP_BALBcJ_G0022324.1 mouse_genomes_project 15 98699750 98701264 - Bin2 protein_coding retained_intron MGP_BALBcJ_T0003614.1 MGP_BALBcJ_G0003274.1 mouse_genomes_project 15 97716705 97725557 - Gm16537 antisense antisense MGP_BALBcJ_T0010031.1 MGP_BALBcJ_G0008156.1 mouse_genomes_project 15 68907013 68907118 + miRNA miRNA MGP_BALBcJ_T0003609.1 MGP_BALBcJ_G0003269.1 mouse_genomes_project 15 95730385 95732550 + Rapgef3os2 antisense antisense MGP_BALBcJ_T0040931.1 MGP_BALBcJ_G0021824.1 mouse_genomes_project 15 52708391 52780659 + MGP_BALBcJ_P0040931 Mtbp protein_coding protein_coding MGP_BALBcJ_T0040932.1 MGP_BALBcJ_G0021824.1 mouse_genomes_project 15 52708578 52764402 + MGP_BALBcJ_P0040932 Mtbp protein_coding protein_coding MGP_BALBcJ_T0040933.1 MGP_BALBcJ_G0021824.1 mouse_genomes_project 15 52708718 52720061 + MGP_BALBcJ_P0040933 Mtbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040934.1 MGP_BALBcJ_G0021824.1 mouse_genomes_project 15 52727879 52780658 + MGP_BALBcJ_P0040934 Mtbp protein_coding protein_coding MGP_BALBcJ_T0040935.1 MGP_BALBcJ_G0021824.1 mouse_genomes_project 15 52771822 52774174 + Mtbp protein_coding retained_intron MGP_BALBcJ_T0040936.1 MGP_BALBcJ_G0021824.1 mouse_genomes_project 15 52775687 52780657 + Mtbp protein_coding processed_transcript MGP_BALBcJ_T0040937.1 MGP_BALBcJ_G0021825.1 mouse_genomes_project 15 52793064 53059466 - MGP_BALBcJ_P0040937 Sntb1 protein_coding protein_coding MGP_BALBcJ_T0040938.1 MGP_BALBcJ_G0021825.1 mouse_genomes_project 15 52944565 53059239 - MGP_BALBcJ_P0040938 Sntb1 protein_coding protein_coding MGP_BALBcJ_T0040939.1 MGP_BALBcJ_G0021825.1 mouse_genomes_project 15 52945539 53058827 - Sntb1 protein_coding processed_transcript MGP_BALBcJ_T0010014.1 MGP_BALBcJ_G0008139.1 mouse_genomes_project 15 26780863 26780937 - Mir3964 miRNA miRNA MGP_BALBcJ_T0017424.1 MGP_BALBcJ_G0015236.1 mouse_genomes_project 15 63046907 63047395 + Gm20405 processed_transcript processed_transcript MGP_BALBcJ_T0010006.1 MGP_BALBcJ_G0008131.1 mouse_genomes_project 15 2703734 2703848 + Gm27760 miRNA miRNA MGP_BALBcJ_T0040860.1 MGP_BALBcJ_G0021797.1 mouse_genomes_project 15 41484961 41494556 + MGP_BALBcJ_P0040860 Eny2 protein_coding protein_coding MGP_BALBcJ_T0041753.1 MGP_BALBcJ_G0022063.1 mouse_genomes_project 15 77783743 77792551 + MGP_BALBcJ_P0041753 Mief1 protein_coding unknown_likely_coding MGP_BALBcJ_T0042251.1 MGP_BALBcJ_G0022213.1 mouse_genomes_project 15 89101011 89418912 - MGP_BALBcJ_P0042251 Slc2a13 protein_coding protein_coding MGP_BALBcJ_T0042252.1 MGP_BALBcJ_G0022213.1 mouse_genomes_project 15 89231518 89247895 - Slc2a13 protein_coding processed_transcript MGP_BALBcJ_T0042253.1 MGP_BALBcJ_G0022213.1 mouse_genomes_project 15 89387904 89418845 - Slc2a13 protein_coding processed_transcript MGP_BALBcJ_T0042652.1 MGP_BALBcJ_G0022343.1 mouse_genomes_project 15 99617405 99625157 - MGP_BALBcJ_P0042652 Krt84 protein_coding protein_coding MGP_BALBcJ_T0101860.1 MGP_BALBcJ_G0039774.1 mouse_genomes_project 15 72472422 72476080 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101861.1 MGP_BALBcJ_G0039774.1 mouse_genomes_project 15 72472624 72475779 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0040728.1 MGP_BALBcJ_G0021748.1 mouse_genomes_project 15 31557256 31568425 - MGP_BALBcJ_P0040728 Rida protein_coding protein_coding MGP_BALBcJ_T0040729.1 MGP_BALBcJ_G0021748.1 mouse_genomes_project 15 31557259 31563025 - Rida protein_coding retained_intron MGP_BALBcJ_T0040730.1 MGP_BALBcJ_G0021748.1 mouse_genomes_project 15 31558129 31568341 - Rida protein_coding retained_intron MGP_BALBcJ_T0040731.1 MGP_BALBcJ_G0021748.1 mouse_genomes_project 15 31558839 31562911 - Rida protein_coding processed_transcript MGP_BALBcJ_T0003585.1 MGP_BALBcJ_G0003252.1 mouse_genomes_project 15 63474273 63477608 + Gm27242 antisense antisense MGP_BALBcJ_T0006748.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59171313 59386815 + lincRNA lincRNA MGP_BALBcJ_T0006749.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59171365 59395888 + lincRNA lincRNA MGP_BALBcJ_T0006750.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59171374 59386811 + lincRNA lincRNA MGP_BALBcJ_T0006751.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59171377 59513734 + lincRNA lincRNA MGP_BALBcJ_T0006752.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59171388 59388265 + lincRNA lincRNA MGP_BALBcJ_T0006753.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59172584 59386510 + lincRNA lincRNA MGP_BALBcJ_T0006754.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59238033 59246489 + lincRNA lincRNA MGP_BALBcJ_T0006755.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59316915 59388267 + lincRNA lincRNA MGP_BALBcJ_T0006756.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59357733 59386813 + lincRNA lincRNA MGP_BALBcJ_T0006757.1 MGP_BALBcJ_G0005569.1 mouse_genomes_project 15 59362115 59379767 + lincRNA lincRNA MGP_BALBcJ_T0041985.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81549452 81563636 + MGP_BALBcJ_P0041985 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041986.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81560384 81631062 + MGP_BALBcJ_P0041986 Mpped1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041987.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81563443 81628882 + MGP_BALBcJ_P0041987 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041988.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81563518 81628978 + MGP_BALBcJ_P0041988 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041989.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81563539 81631056 + MGP_BALBcJ_P0041989 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041990.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81568451 81624645 + MGP_BALBcJ_P0041990 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041991.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81571911 81628863 + MGP_BALBcJ_P0041991 Mpped1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041992.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81608292 81628883 + MGP_BALBcJ_P0041992 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041993.1 MGP_BALBcJ_G0022135.1 mouse_genomes_project 15 81608325 81627091 + MGP_BALBcJ_P0041993 Mpped1 protein_coding protein_coding MGP_BALBcJ_T0041597.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76428699 76454359 + Triobp protein_coding processed_transcript MGP_BALBcJ_T0041598.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76428699 76491140 + MGP_BALBcJ_P0041598 Triobp protein_coding protein_coding MGP_BALBcJ_T0041599.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76428699 76491442 + MGP_BALBcJ_P0041599 Triobp protein_coding protein_coding MGP_BALBcJ_T0041600.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76429232 76434849 + Triobp protein_coding retained_intron MGP_BALBcJ_T0041601.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76468627 76491439 + MGP_BALBcJ_P0041601 Triobp protein_coding protein_coding MGP_BALBcJ_T0041602.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76468642 76491437 + MGP_BALBcJ_P0041602 Triobp protein_coding protein_coding MGP_BALBcJ_T0041603.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76468664 76480441 + MGP_BALBcJ_P0041603 Triobp protein_coding protein_coding MGP_BALBcJ_T0041604.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76469292 76477022 + MGP_BALBcJ_P0041604 Triobp protein_coding protein_coding MGP_BALBcJ_T0041605.1 MGP_BALBcJ_G0022026.1 mouse_genomes_project 15 76487761 76490277 + Triobp protein_coding processed_transcript MGP_BALBcJ_T0041868.1 MGP_BALBcJ_G0022093.1 mouse_genomes_project 15 79539902 79560976 + MGP_BALBcJ_P0041868 Csdc2 protein_coding protein_coding MGP_BALBcJ_T0041869.1 MGP_BALBcJ_G0022093.1 mouse_genomes_project 15 79540135 79556909 + MGP_BALBcJ_P0041869 Csdc2 protein_coding protein_coding MGP_BALBcJ_T0041870.1 MGP_BALBcJ_G0022093.1 mouse_genomes_project 15 79555770 79556927 + Csdc2 protein_coding processed_transcript MGP_BALBcJ_T0041871.1 MGP_BALBcJ_G0022093.1 mouse_genomes_project 15 79557000 79560969 + Csdc2 protein_coding retained_intron MGP_BALBcJ_T0042795.1 MGP_BALBcJ_G0022397.1 mouse_genomes_project 15 101124896 101137388 + Hoxc6 protein_coding processed_transcript MGP_BALBcJ_T0042796.1 MGP_BALBcJ_G0022397.1 mouse_genomes_project 15 101127166 101136626 + Hoxc6 protein_coding processed_transcript MGP_BALBcJ_T0042797.1 MGP_BALBcJ_G0022397.1 mouse_genomes_project 15 101136192 101138501 + MGP_BALBcJ_P0042797 Hoxc6 protein_coding protein_coding MGP_BALBcJ_T0042096.1 MGP_BALBcJ_G0022172.1 mouse_genomes_project 15 86577264 86596430 + protein_coding processed_transcript MGP_BALBcJ_T0042654.1 MGP_BALBcJ_G0022345.1 mouse_genomes_project 15 99645693 99656256 - MGP_BALBcJ_P0042654 Krt90 protein_coding protein_coding MGP_BALBcJ_T0006798.1 MGP_BALBcJ_G0005600.1 mouse_genomes_project 15 101250303 101274272 - D930007P13Rik lincRNA lincRNA MGP_BALBcJ_T0042327.1 MGP_BALBcJ_G0022242.1 mouse_genomes_project 15 95676377 95696764 - MGP_BALBcJ_P0042327 Endou protein_coding protein_coding MGP_BALBcJ_T0042328.1 MGP_BALBcJ_G0022242.1 mouse_genomes_project 15 95676377 95686509 - MGP_BALBcJ_P0042328 Endou protein_coding protein_coding MGP_BALBcJ_T0011360.1 MGP_BALBcJ_G0009485.1 mouse_genomes_project 15 6895433 6895721 + Gm26350 misc_RNA misc_RNA MGP_BALBcJ_T0042035.1 MGP_BALBcJ_G0022148.1 mouse_genomes_project 15 82685425 82695259 - MGP_BALBcJ_P0042035 Gm29666 protein_coding protein_coding MGP_BALBcJ_T0041483.1 MGP_BALBcJ_G0021982.1 mouse_genomes_project 15 74213171 74214567 + MGP_BALBcJ_P0041483 Commd5 protein_coding protein_coding MGP_BALBcJ_T0041484.1 MGP_BALBcJ_G0021982.1 mouse_genomes_project 15 74213197 74214453 + MGP_BALBcJ_P0041484 Commd5 protein_coding protein_coding MGP_BALBcJ_T0040986.1 MGP_BALBcJ_G0021847.1 mouse_genomes_project 15 56086465 56092145 + MGP_BALBcJ_P0040986 Ndufb9 protein_coding protein_coding MGP_BALBcJ_T0006762.1 MGP_BALBcJ_G0005574.1 mouse_genomes_project 15 76342766 76346611 - Gm26634 lincRNA lincRNA MGP_BALBcJ_T0042530.1 MGP_BALBcJ_G0022307.1 mouse_genomes_project 15 97735676 97773693 - MGP_BALBcJ_P0042530 Cers5 protein_coding protein_coding MGP_BALBcJ_T0042531.1 MGP_BALBcJ_G0022307.1 mouse_genomes_project 15 97736106 97773696 - MGP_BALBcJ_P0042531 Cers5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042532.1 MGP_BALBcJ_G0022307.1 mouse_genomes_project 15 97736413 97773832 - MGP_BALBcJ_P0042532 Cers5 protein_coding protein_coding MGP_BALBcJ_T0042533.1 MGP_BALBcJ_G0022307.1 mouse_genomes_project 15 97738151 97747915 - MGP_BALBcJ_P0042533 Cers5 protein_coding protein_coding MGP_BALBcJ_T0042534.1 MGP_BALBcJ_G0022307.1 mouse_genomes_project 15 97740220 97774116 - MGP_BALBcJ_P0042534 Cers5 protein_coding protein_coding MGP_BALBcJ_T0042535.1 MGP_BALBcJ_G0022307.1 mouse_genomes_project 15 97746811 97773323 - MGP_BALBcJ_P0042535 Cers5 protein_coding protein_coding MGP_BALBcJ_T0017399.1 MGP_BALBcJ_G0015227.1 mouse_genomes_project 15 874762 879141 - BC037032 processed_transcript TEC MGP_BALBcJ_T0017400.1 MGP_BALBcJ_G0015227.1 mouse_genomes_project 15 876334 882042 - BC037032 processed_transcript antisense MGP_BALBcJ_T0017401.1 MGP_BALBcJ_G0015227.1 mouse_genomes_project 15 877019 882051 - BC037032 processed_transcript antisense MGP_BALBcJ_T0017402.1 MGP_BALBcJ_G0015227.1 mouse_genomes_project 15 877623 882054 - BC037032 processed_transcript antisense MGP_BALBcJ_T0017403.1 MGP_BALBcJ_G0015227.1 mouse_genomes_project 15 878219 880725 - BC037032 processed_transcript antisense MGP_BALBcJ_T0017404.1 MGP_BALBcJ_G0015227.1 mouse_genomes_project 15 881045 881801 - BC037032 processed_transcript antisense MGP_BALBcJ_T0042556.1 MGP_BALBcJ_G0022313.1 mouse_genomes_project 15 98298357 98316149 + MGP_BALBcJ_P0042556 Tmprss12 protein_coding protein_coding MGP_BALBcJ_T0010043.1 MGP_BALBcJ_G0008168.1 mouse_genomes_project 15 77533127 77533218 - Mir7213 miRNA miRNA MGP_BALBcJ_T0100737.1 MGP_BALBcJ_G0038773.1 mouse_genomes_project 15 27067264 27067337 - Gm24554 snoRNA snoRNA MGP_BALBcJ_T0040782.1 MGP_BALBcJ_G0021767.1 mouse_genomes_project 15 34103430 34111836 - MGP_BALBcJ_P0040782 Zfp706 protein_coding protein_coding MGP_BALBcJ_T0013029.1 MGP_BALBcJ_G0011126.1 mouse_genomes_project 15 7376661 7377920 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006729.1 MGP_BALBcJ_G0005553.1 mouse_genomes_project 15 29292973 29293629 + 4930518I17Rik lincRNA lincRNA MGP_BALBcJ_T0010067.1 MGP_BALBcJ_G0008192.1 mouse_genomes_project 15 87136178 87136253 - Mir6959 miRNA miRNA MGP_BALBcJ_T0040622.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9667406 9783359 + MGP_BALBcJ_P0040622 Drosha protein_coding protein_coding MGP_BALBcJ_T0040623.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9667454 9783312 + MGP_BALBcJ_P0040623 Drosha protein_coding protein_coding MGP_BALBcJ_T0040624.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9667481 9675718 + Drosha protein_coding processed_transcript MGP_BALBcJ_T0040625.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9667481 9675718 + Drosha protein_coding processed_transcript MGP_BALBcJ_T0040626.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9668717 9675636 + Drosha protein_coding processed_transcript MGP_BALBcJ_T0040627.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9674925 9783191 + MGP_BALBcJ_P0040627 Drosha protein_coding protein_coding MGP_BALBcJ_T0040628.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9678872 9753735 + Drosha protein_coding retained_intron MGP_BALBcJ_T0040629.1 MGP_BALBcJ_G0021707.1 mouse_genomes_project 15 9725170 9732350 + Drosha protein_coding processed_transcript MGP_BALBcJ_T0010062.1 MGP_BALBcJ_G0008187.1 mouse_genomes_project 15 83498391 83498476 + Mirlet7b miRNA miRNA MGP_BALBcJ_T0010079.1 MGP_BALBcJ_G0008204.1 mouse_genomes_project 15 99722414 99742141 + miRNA miRNA MGP_BALBcJ_T0041802.1 MGP_BALBcJ_G0022075.1 mouse_genomes_project 15 78805439 78808885 + MGP_BALBcJ_P0041802 Mchr1 protein_coding protein_coding MGP_BALBcJ_T0010039.1 MGP_BALBcJ_G0008164.1 mouse_genomes_project 15 76487802 76487864 + Mir6956 miRNA miRNA MGP_BALBcJ_T0017428.1 MGP_BALBcJ_G0015239.1 mouse_genomes_project 15 70778756 70785327 + 1700010B13Rik processed_transcript lincRNA MGP_BALBcJ_T0017429.1 MGP_BALBcJ_G0015239.1 mouse_genomes_project 15 70778778 70780507 + 1700010B13Rik processed_transcript retained_intron MGP_BALBcJ_T0040898.1 MGP_BALBcJ_G0021811.1 mouse_genomes_project 15 50620523 51061448 - Samd12 protein_coding processed_transcript MGP_BALBcJ_T0040899.1 MGP_BALBcJ_G0021811.1 mouse_genomes_project 15 50620703 51061441 - MGP_BALBcJ_P0040899 Samd12 protein_coding protein_coding MGP_BALBcJ_T0040900.1 MGP_BALBcJ_G0021811.1 mouse_genomes_project 15 50621096 51061292 - MGP_BALBcJ_P0040900 Samd12 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040901.1 MGP_BALBcJ_G0021811.1 mouse_genomes_project 15 50980738 51061448 - Samd12 protein_coding processed_transcript MGP_BALBcJ_T0041502.1 MGP_BALBcJ_G0021989.1 mouse_genomes_project 15 74720655 74734367 - MGP_BALBcJ_P0041502 protein_coding protein_coding MGP_BALBcJ_T0041503.1 MGP_BALBcJ_G0021989.1 mouse_genomes_project 15 74720656 74734343 - MGP_BALBcJ_P0041503 protein_coding protein_coding MGP_BALBcJ_T0041504.1 MGP_BALBcJ_G0021989.1 mouse_genomes_project 15 74727265 74730867 - protein_coding retained_intron MGP_BALBcJ_T0041505.1 MGP_BALBcJ_G0021989.1 mouse_genomes_project 15 74727347 74733731 - MGP_BALBcJ_P0041505 protein_coding protein_coding MGP_BALBcJ_T0041161.1 MGP_BALBcJ_G0021896.1 mouse_genomes_project 15 71833682 71840917 - MGP_BALBcJ_P0041161 Jrk protein_coding protein_coding MGP_BALBcJ_T0013038.1 MGP_BALBcJ_G0011135.1 mouse_genomes_project 15 34610110 34610583 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042762.1 MGP_BALBcJ_G0022385.1 mouse_genomes_project 15 100644379 100645256 - MGP_BALBcJ_P0042762 Npff protein_coding protein_coding MGP_BALBcJ_T0042764.1 MGP_BALBcJ_G0022385.1 mouse_genomes_project 15 100644386 100645483 - Npff protein_coding retained_intron MGP_BALBcJ_T0010034.1 MGP_BALBcJ_G0008159.1 mouse_genomes_project 15 73520265 73520328 - Mir1942 miRNA miRNA MGP_BALBcJ_T0013061.1 MGP_BALBcJ_G0011158.1 mouse_genomes_project 15 74108832 74109187 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041718.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77425434 77438797 + MGP_BALBcJ_P0041718 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041719.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77425469 77438850 + MGP_BALBcJ_P0041719 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041720.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77425824 77430702 + Apobec3 protein_coding processed_transcript MGP_BALBcJ_T0041721.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426181 77441684 + MGP_BALBcJ_P0041721 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041722.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426184 77438742 + MGP_BALBcJ_P0041722 Apobec3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041723.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426215 77440623 + MGP_BALBcJ_P0041723 Apobec3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041724.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426221 77441343 + MGP_BALBcJ_P0041724 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041725.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426222 77441691 + MGP_BALBcJ_P0041725 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041726.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426228 77448761 + MGP_BALBcJ_P0041726 Apobec3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041727.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77426257 77440623 + MGP_BALBcJ_P0041727 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041728.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77428829 77431123 + MGP_BALBcJ_P0041728 Apobec3 protein_coding protein_coding MGP_BALBcJ_T0041729.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77430760 77439160 + Apobec3 protein_coding retained_intron MGP_BALBcJ_T0041730.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77433559 77441178 + Apobec3 protein_coding retained_intron MGP_BALBcJ_T0041731.1 MGP_BALBcJ_G0022056.1 mouse_genomes_project 15 77439364 77440331 + Apobec3 protein_coding retained_intron MGP_BALBcJ_T0042411.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96514147 96547600 - MGP_BALBcJ_P0042411 Ccnt1 protein_coding protein_coding MGP_BALBcJ_T0042412.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96514158 96518460 - Ccnt1 protein_coding processed_transcript MGP_BALBcJ_T0042413.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96518650 96544224 - MGP_BALBcJ_P0042413 Ccnt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042414.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96518650 96544224 - MGP_BALBcJ_P0042414 Ccnt1 protein_coding protein_coding MGP_BALBcJ_T0042415.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96519578 96530479 - Ccnt1 protein_coding retained_intron MGP_BALBcJ_T0042416.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96519779 96522460 - Ccnt1 protein_coding retained_intron MGP_BALBcJ_T0042417.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96520006 96541727 - Ccnt1 protein_coding retained_intron MGP_BALBcJ_T0042418.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96524091 96544133 - Ccnt1 protein_coding retained_intron MGP_BALBcJ_T0042419.1 MGP_BALBcJ_G0022266.1 mouse_genomes_project 15 96534391 96544268 - Ccnt1 protein_coding retained_intron MGP_BALBcJ_T0041694.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77261237 77279896 - Sun2 protein_coding retained_intron MGP_BALBcJ_T0041695.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77261237 77279974 - MGP_BALBcJ_P0041695 Sun2 protein_coding protein_coding MGP_BALBcJ_T0041696.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77261238 77279944 - MGP_BALBcJ_P0041696 Sun2 protein_coding protein_coding MGP_BALBcJ_T0041697.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77261240 77279976 - MGP_BALBcJ_P0041697 Sun2 protein_coding protein_coding MGP_BALBcJ_T0041698.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77266791 77279944 - Sun2 protein_coding retained_intron MGP_BALBcJ_T0041699.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77270765 77272609 - Sun2 protein_coding retained_intron MGP_BALBcJ_T0041700.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77276089 77279555 - MGP_BALBcJ_P0041700 Sun2 protein_coding protein_coding MGP_BALBcJ_T0041701.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77277171 77279543 - MGP_BALBcJ_P0041701 Sun2 protein_coding protein_coding MGP_BALBcJ_T0041702.1 MGP_BALBcJ_G0022051.1 mouse_genomes_project 15 77277278 77279532 - MGP_BALBcJ_P0041702 Sun2 protein_coding protein_coding MGP_BALBcJ_T0042763.1 MGP_BALBcJ_G0022386.1 mouse_genomes_project 15 100644383 100742426 - MGP_BALBcJ_P0042763 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099447.1 MGP_BALBcJ_G0037483.1 mouse_genomes_project 15 464674 464800 - Gm22031 snRNA snRNA MGP_BALBcJ_T0003575.1 MGP_BALBcJ_G0003244.1 mouse_genomes_project 15 3437000 3488233 - Gm2245 antisense antisense MGP_BALBcJ_T0041752.1 MGP_BALBcJ_G0022062.1 mouse_genomes_project 15 77713339 77756557 + MGP_BALBcJ_P0041752 Mgat3 protein_coding protein_coding MGP_BALBcJ_T0040893.1 MGP_BALBcJ_G0021809.1 mouse_genomes_project 15 49885501 49903276 + MGP_BALBcJ_P0040893 Med30 protein_coding protein_coding MGP_BALBcJ_T0042504.1 MGP_BALBcJ_G0022297.1 mouse_genomes_project 15 97497041 97528016 - MGP_BALBcJ_P0042504 Faim2 protein_coding protein_coding MGP_BALBcJ_T0042693.1 MGP_BALBcJ_G0022370.1 mouse_genomes_project 15 100319820 100335637 - MGP_BALBcJ_P0042693 Itgb7 protein_coding protein_coding MGP_BALBcJ_T0042694.1 MGP_BALBcJ_G0022370.1 mouse_genomes_project 15 100328246 100335637 - MGP_BALBcJ_P0042694 Itgb7 protein_coding protein_coding MGP_BALBcJ_T0042421.1 MGP_BALBcJ_G0022268.1 mouse_genomes_project 15 96567243 96581986 - MGP_BALBcJ_P0042421 Adcy6 protein_coding unknown_likely_coding MGP_BALBcJ_T0042422.1 MGP_BALBcJ_G0022268.1 mouse_genomes_project 15 96567251 96584888 - MGP_BALBcJ_P0042422 Adcy6 protein_coding protein_coding MGP_BALBcJ_T0100734.1 MGP_BALBcJ_G0038770.1 mouse_genomes_project 15 20233274 20233406 + Gm24656 snoRNA snoRNA MGP_BALBcJ_T0100771.1 MGP_BALBcJ_G0038807.1 mouse_genomes_project 15 96494249 96494387 - Snora34 snoRNA snoRNA MGP_BALBcJ_T0011371.1 MGP_BALBcJ_G0009496.1 mouse_genomes_project 15 75840127 75840237 + Gm26329 misc_RNA misc_RNA MGP_BALBcJ_T0011361.1 MGP_BALBcJ_G0009486.1 mouse_genomes_project 15 8792447 8792707 + Gm24074 misc_RNA misc_RNA MGP_BALBcJ_T0042271.1 MGP_BALBcJ_G0022218.1 mouse_genomes_project 15 91106394 91142001 - MGP_BALBcJ_P0042271 Gxylt1 protein_coding protein_coding MGP_BALBcJ_T0042272.1 MGP_BALBcJ_G0022218.1 mouse_genomes_project 15 91111212 91141991 - MGP_BALBcJ_P0042272 Gxylt1 protein_coding protein_coding MGP_BALBcJ_T0040911.1 MGP_BALBcJ_G0021818.1 mouse_genomes_project 15 52161217 52218100 - MGP_BALBcJ_P0040911 Taf2 protein_coding protein_coding MGP_BALBcJ_T0042089.1 MGP_BALBcJ_G0022170.1 mouse_genomes_project 15 86421835 86423203 + MGP_BALBcJ_P0042089 Zdhhc25 protein_coding protein_coding MGP_BALBcJ_T0042381.1 MGP_BALBcJ_G0022251.1 mouse_genomes_project 15 96102488 96133407 - MGP_BALBcJ_P0042381 Asb8 protein_coding protein_coding MGP_BALBcJ_T0042382.1 MGP_BALBcJ_G0022251.1 mouse_genomes_project 15 96103565 96113533 - MGP_BALBcJ_P0042382 Asb8 protein_coding protein_coding MGP_BALBcJ_T0042383.1 MGP_BALBcJ_G0022251.1 mouse_genomes_project 15 96103565 96113486 - MGP_BALBcJ_P0042383 Asb8 protein_coding protein_coding MGP_BALBcJ_T0042384.1 MGP_BALBcJ_G0022251.1 mouse_genomes_project 15 96103565 96133342 - MGP_BALBcJ_P0042384 Asb8 protein_coding protein_coding MGP_BALBcJ_T0041509.1 MGP_BALBcJ_G0021992.1 mouse_genomes_project 15 74951594 74961519 - MGP_BALBcJ_P0041509 1700025B11Rik protein_coding protein_coding MGP_BALBcJ_T0040478.1 MGP_BALBcJ_G0021667.1 mouse_genomes_project 15 3642492 3703860 - MGP_BALBcJ_P0040478 Osmr protein_coding protein_coding MGP_BALBcJ_T0040479.1 MGP_BALBcJ_G0021667.1 mouse_genomes_project 15 3643952 3703860 - MGP_BALBcJ_P0040479 Osmr protein_coding protein_coding MGP_BALBcJ_T0040480.1 MGP_BALBcJ_G0021667.1 mouse_genomes_project 15 3649538 3654857 - Osmr protein_coding retained_intron MGP_BALBcJ_T0040481.1 MGP_BALBcJ_G0021667.1 mouse_genomes_project 15 3665652 3703159 - Osmr protein_coding retained_intron MGP_BALBcJ_T0040482.1 MGP_BALBcJ_G0021667.1 mouse_genomes_project 15 3672853 3703148 - Osmr protein_coding retained_intron MGP_BALBcJ_T0040483.1 MGP_BALBcJ_G0021667.1 mouse_genomes_project 15 3683858 3703187 - Osmr protein_coding retained_intron MGP_BALBcJ_T0006758.1 MGP_BALBcJ_G0005570.1 mouse_genomes_project 15 64418539 64549856 + lincRNA lincRNA MGP_BALBcJ_T0041684.1 MGP_BALBcJ_G0022046.1 mouse_genomes_project 15 77154205 77203479 - MGP_BALBcJ_P0041684 Fam227a protein_coding protein_coding MGP_BALBcJ_T0041685.1 MGP_BALBcJ_G0022046.1 mouse_genomes_project 15 77156933 77203316 - MGP_BALBcJ_P0041685 Fam227a protein_coding protein_coding MGP_BALBcJ_T0041686.1 MGP_BALBcJ_G0022046.1 mouse_genomes_project 15 77156987 77203316 - MGP_BALBcJ_P0041686 Fam227a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041687.1 MGP_BALBcJ_G0022046.1 mouse_genomes_project 15 77167647 77194278 - MGP_BALBcJ_P0041687 Fam227a protein_coding protein_coding MGP_BALBcJ_T0041688.1 MGP_BALBcJ_G0022046.1 mouse_genomes_project 15 77179532 77203479 - Fam227a protein_coding retained_intron MGP_BALBcJ_T0041454.1 MGP_BALBcJ_G0021974.1 mouse_genomes_project 15 74009800 74012725 + MGP_BALBcJ_P0041454 Gpt protein_coding protein_coding MGP_BALBcJ_T0040890.1 MGP_BALBcJ_G0021806.1 mouse_genomes_project 15 49155660 49185155 - MGP_BALBcJ_P0040890 Rad21 protein_coding protein_coding MGP_BALBcJ_T0040646.1 MGP_BALBcJ_G0021714.1 mouse_genomes_project 15 22230949 22242579 - MGP_BALBcJ_P0040646 9230109A22Rik protein_coding protein_coding MGP_BALBcJ_T0041062.1 MGP_BALBcJ_G0021872.1 mouse_genomes_project 15 63771871 63837374 + MGP_BALBcJ_P0041062 Phf20l1 protein_coding protein_coding MGP_BALBcJ_T0010037.1 MGP_BALBcJ_G0008162.1 mouse_genomes_project 15 73749885 73749945 + Mir6954 miRNA miRNA MGP_BALBcJ_T0098515.1 MGP_BALBcJ_G0036569.1 mouse_genomes_project 15 27640172 27640291 + Gm23956 rRNA rRNA MGP_BALBcJ_T0041610.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76540869 76550661 - MGP_BALBcJ_P0041610 Ankrd54 protein_coding protein_coding MGP_BALBcJ_T0041611.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76540879 76550661 - Ankrd54 protein_coding retained_intron MGP_BALBcJ_T0041612.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76541349 76543189 - MGP_BALBcJ_P0041612 Ankrd54 protein_coding protein_coding MGP_BALBcJ_T0041613.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76541543 76543120 - MGP_BALBcJ_P0041613 Ankrd54 protein_coding protein_coding MGP_BALBcJ_T0041614.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76543161 76550658 - MGP_BALBcJ_P0041614 Ankrd54 protein_coding protein_coding MGP_BALBcJ_T0041615.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76543190 76550612 - MGP_BALBcJ_P0041615 Ankrd54 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041616.1 MGP_BALBcJ_G0022029.1 mouse_genomes_project 15 76547396 76550669 - Ankrd54 protein_coding retained_intron MGP_BALBcJ_T0098329.1 MGP_BALBcJ_G0036383.1 mouse_genomes_project 15 73212450 73214839 + pseudogene pseudogene MGP_BALBcJ_T0013042.1 MGP_BALBcJ_G0011139.1 mouse_genomes_project 15 40275211 40276223 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013034.1 MGP_BALBcJ_G0011131.1 mouse_genomes_project 15 33212226 33213155 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041912.1 MGP_BALBcJ_G0022107.1 mouse_genomes_project 15 79920506 79936965 + MGP_BALBcJ_P0041912 Wbp2nl protein_coding protein_coding MGP_BALBcJ_T0099453.1 MGP_BALBcJ_G0037489.1 mouse_genomes_project 15 21910482 21910640 - Gm22810 snRNA snRNA MGP_BALBcJ_T0040444.1 MGP_BALBcJ_G0021659.1 mouse_genomes_project 15 1960432 1961003 - MGP_BALBcJ_P0040444 Gm10250 protein_coding protein_coding MGP_BALBcJ_T0041843.1 MGP_BALBcJ_G0022085.1 mouse_genomes_project 15 79305119 79330084 - MGP_BALBcJ_P0041843 Rangap1 protein_coding protein_coding MGP_BALBcJ_T0041844.1 MGP_BALBcJ_G0022085.1 mouse_genomes_project 15 79305119 79330084 - MGP_BALBcJ_P0041844 Rangap1 protein_coding protein_coding MGP_BALBcJ_T0041845.1 MGP_BALBcJ_G0022085.1 mouse_genomes_project 15 79305488 79330031 - MGP_BALBcJ_P0041845 Rangap1 protein_coding protein_coding MGP_BALBcJ_T0041247.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73197486 73212046 - MGP_BALBcJ_P0041247 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041248.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73197490 73212031 - MGP_BALBcJ_P0041248 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041249.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73197490 73212025 - MGP_BALBcJ_P0041249 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041250.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198178 73211997 - MGP_BALBcJ_P0041250 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041251.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198178 73211988 - MGP_BALBcJ_P0041251 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041252.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198178 73206247 - MGP_BALBcJ_P0041252 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041253.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198180 73212026 - MGP_BALBcJ_P0041253 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041254.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198180 73212010 - MGP_BALBcJ_P0041254 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041255.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198182 73199431 - Eef1d protein_coding retained_intron MGP_BALBcJ_T0041256.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198494 73212020 - MGP_BALBcJ_P0041256 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041257.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198964 73212247 - MGP_BALBcJ_P0041257 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041258.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73198971 73212010 - MGP_BALBcJ_P0041258 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041259.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73199084 73212238 - MGP_BALBcJ_P0041259 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041260.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73199366 73203946 - Eef1d protein_coding retained_intron MGP_BALBcJ_T0041261.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73200796 73212010 - Eef1d protein_coding retained_intron MGP_BALBcJ_T0041262.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73205813 73212238 - MGP_BALBcJ_P0041262 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041263.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73205952 73208054 - MGP_BALBcJ_P0041263 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041264.1 MGP_BALBcJ_G0021930.1 mouse_genomes_project 15 73206196 73211982 - MGP_BALBcJ_P0041264 Eef1d protein_coding protein_coding MGP_BALBcJ_T0041400.1 MGP_BALBcJ_G0021961.1 mouse_genomes_project 15 73794531 73818614 + MGP_BALBcJ_P0041400 Hsf1 protein_coding protein_coding MGP_BALBcJ_T0041401.1 MGP_BALBcJ_G0021961.1 mouse_genomes_project 15 73794687 73818264 + MGP_BALBcJ_P0041401 Hsf1 protein_coding unknown_likely_coding MGP_BALBcJ_T0011380.1 MGP_BALBcJ_G0009505.1 mouse_genomes_project 15 101075806 101075981 + Gm28011 misc_RNA misc_RNA MGP_BALBcJ_T0042218.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87335938 87397925 + MGP_BALBcJ_P0042218 Shank3 protein_coding protein_coding MGP_BALBcJ_T0042219.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87336059 87397925 + MGP_BALBcJ_P0042219 Shank3 protein_coding protein_coding MGP_BALBcJ_T0042220.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87336325 87339619 + Shank3 protein_coding processed_transcript MGP_BALBcJ_T0042221.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87337481 87397923 + MGP_BALBcJ_P0042221 Shank3 protein_coding protein_coding MGP_BALBcJ_T0042222.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87361357 87371095 + Shank3 protein_coding processed_transcript MGP_BALBcJ_T0042223.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87367496 87369109 + Shank3 protein_coding processed_transcript MGP_BALBcJ_T0042224.1 MGP_BALBcJ_G0022204.1 mouse_genomes_project 15 87369590 87380656 + MGP_BALBcJ_P0042224 Shank3 protein_coding protein_coding MGP_BALBcJ_T0099461.1 MGP_BALBcJ_G0037497.1 mouse_genomes_project 15 44023941 44024003 - Gm23665 snRNA snRNA MGP_BALBcJ_T0042005.1 MGP_BALBcJ_G0022139.1 mouse_genomes_project 15 81940485 81962021 + MGP_BALBcJ_P0042005 Pnpla3 protein_coding protein_coding MGP_BALBcJ_T0017425.1 MGP_BALBcJ_G0015237.1 mouse_genomes_project 15 64165104 64205270 + Gm2895 processed_transcript processed_transcript MGP_BALBcJ_T0040587.1 MGP_BALBcJ_G0021697.1 mouse_genomes_project 15 7889526 8174508 + MGP_BALBcJ_P0040587 Adamts12 protein_coding protein_coding MGP_BALBcJ_T0013024.1 MGP_BALBcJ_G0011121.1 mouse_genomes_project 15 2051785 2053020 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042296.1 MGP_BALBcJ_G0022225.1 mouse_genomes_project 15 92440514 92466811 + MGP_BALBcJ_P0042296 Irak4 protein_coding protein_coding MGP_BALBcJ_T0042297.1 MGP_BALBcJ_G0022225.1 mouse_genomes_project 15 92440524 92454644 + Irak4 protein_coding retained_intron MGP_BALBcJ_T0042298.1 MGP_BALBcJ_G0022225.1 mouse_genomes_project 15 92440543 92481021 + MGP_BALBcJ_P0042298 Irak4 protein_coding protein_coding MGP_BALBcJ_T0041280.1 MGP_BALBcJ_G0021938.1 mouse_genomes_project 15 73303645 73316896 - MGP_BALBcJ_P0041280 Fam83h protein_coding protein_coding MGP_BALBcJ_T0041281.1 MGP_BALBcJ_G0021938.1 mouse_genomes_project 15 73303645 73312050 - MGP_BALBcJ_P0041281 Fam83h protein_coding protein_coding MGP_BALBcJ_T0010013.1 MGP_BALBcJ_G0008138.1 mouse_genomes_project 15 24627168 24627233 + Mir7117 miRNA miRNA MGP_BALBcJ_T0041817.1 MGP_BALBcJ_G0022080.1 mouse_genomes_project 15 79051890 79063444 + MGP_BALBcJ_P0041817 Rbx1 protein_coding protein_coding MGP_BALBcJ_T0011379.1 MGP_BALBcJ_G0009504.1 mouse_genomes_project 15 101073868 101073966 + Gm27443 misc_RNA misc_RNA MGP_BALBcJ_T0040528.1 MGP_BALBcJ_G0021679.1 mouse_genomes_project 15 5967594 6026514 + MGP_BALBcJ_P0040528 Lmbrd2 protein_coding protein_coding MGP_BALBcJ_T0003591.1 MGP_BALBcJ_G0003257.1 mouse_genomes_project 15 71918802 71935324 + Gm17189 antisense antisense MGP_BALBcJ_T0042802.1 MGP_BALBcJ_G0022400.1 mouse_genomes_project 15 101319148 101368491 - MGP_BALBcJ_P0042802 Cbx5 protein_coding protein_coding MGP_BALBcJ_T0042803.1 MGP_BALBcJ_G0022400.1 mouse_genomes_project 15 101324291 101342941 - MGP_BALBcJ_P0042803 Cbx5 protein_coding protein_coding MGP_BALBcJ_T0042804.1 MGP_BALBcJ_G0022400.1 mouse_genomes_project 15 101326859 101342894 - MGP_BALBcJ_P0042804 Cbx5 protein_coding protein_coding MGP_BALBcJ_T0042805.1 MGP_BALBcJ_G0022400.1 mouse_genomes_project 15 101340672 101342955 - MGP_BALBcJ_P0042805 Cbx5 protein_coding protein_coding MGP_BALBcJ_T0040504.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5488382 5565189 - MGP_BALBcJ_P0040504 Slc1a3 protein_coding protein_coding MGP_BALBcJ_T0040505.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5488985 5505662 - Slc1a3 protein_coding retained_intron MGP_BALBcJ_T0040506.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5496530 5497528 - Slc1a3 protein_coding retained_intron MGP_BALBcJ_T0040507.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5533944 5564841 - Slc1a3 protein_coding processed_transcript MGP_BALBcJ_T0040508.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5539991 5564834 - MGP_BALBcJ_P0040508 Slc1a3 protein_coding protein_coding MGP_BALBcJ_T0040509.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5541873 5564921 - Slc1a3 protein_coding retained_intron MGP_BALBcJ_T0040510.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5562034 5564906 - Slc1a3 protein_coding retained_intron MGP_BALBcJ_T0040511.1 MGP_BALBcJ_G0021675.1 mouse_genomes_project 15 5563167 5564013 - Slc1a3 protein_coding processed_transcript MGP_BALBcJ_T0003623.1 MGP_BALBcJ_G0003281.1 mouse_genomes_project 15 98747282 98756916 + Galnt6os antisense antisense MGP_BALBcJ_T0041927.1 MGP_BALBcJ_G0022115.1 mouse_genomes_project 15 80240358 80244664 + MGP_BALBcJ_P0041927 protein_coding protein_coding MGP_BALBcJ_T0102256.1 MGP_BALBcJ_G0040072.1 mouse_genomes_project 15 72508078 72511623 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010018.1 MGP_BALBcJ_G0008143.1 mouse_genomes_project 15 33680595 33680721 + Gm44310 miRNA miRNA MGP_BALBcJ_T0003601.1 MGP_BALBcJ_G0003263.1 mouse_genomes_project 15 80636795 80644401 + Gm20324 antisense antisense MGP_BALBcJ_T0040892.1 MGP_BALBcJ_G0021808.1 mouse_genomes_project 15 49483187 49524954 + MGP_BALBcJ_P0040892 Slc30a8 protein_coding protein_coding MGP_BALBcJ_T0040425.1 MGP_BALBcJ_G0021651.1 mouse_genomes_project 15 836240 849960 - MGP_BALBcJ_P0040425 AW549877 protein_coding protein_coding MGP_BALBcJ_T0099463.1 MGP_BALBcJ_G0037499.1 mouse_genomes_project 15 46043298 46043383 - Gm23185 snRNA snRNA MGP_BALBcJ_T0040994.1 MGP_BALBcJ_G0021851.1 mouse_genomes_project 15 56529729 56694207 + MGP_BALBcJ_P0040994 Nsmce2 protein_coding protein_coding MGP_BALBcJ_T0040995.1 MGP_BALBcJ_G0021851.1 mouse_genomes_project 15 56529729 56755737 + MGP_BALBcJ_P0040995 Nsmce2 protein_coding protein_coding MGP_BALBcJ_T0041163.1 MGP_BALBcJ_G0021898.1 mouse_genomes_project 15 71852414 71856125 + MGP_BALBcJ_P0041163 Them6 protein_coding protein_coding MGP_BALBcJ_T0041512.1 MGP_BALBcJ_G0021995.1 mouse_genomes_project 15 75133183 75158282 + MGP_BALBcJ_P0041512 Apol7e protein_coding protein_coding MGP_BALBcJ_T0101634.1 MGP_BALBcJ_G0039641.1 mouse_genomes_project 15 30482238 30484222 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101635.1 MGP_BALBcJ_G0039641.1 mouse_genomes_project 15 30483451 30484185 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0040915.1 MGP_BALBcJ_G0021820.1 mouse_genomes_project 15 52245884 52260636 - MGP_BALBcJ_P0040915 Gm9920 protein_coding protein_coding MGP_BALBcJ_T0040916.1 MGP_BALBcJ_G0021820.1 mouse_genomes_project 15 52246032 52260514 - MGP_BALBcJ_P0040916 Gm9920 protein_coding protein_coding MGP_BALBcJ_T0040917.1 MGP_BALBcJ_G0021820.1 mouse_genomes_project 15 52257329 52260731 - Gm9920 protein_coding processed_transcript MGP_BALBcJ_T0040918.1 MGP_BALBcJ_G0021820.1 mouse_genomes_project 15 52258916 52260514 - Gm9920 protein_coding retained_intron MGP_BALBcJ_T0040582.1 MGP_BALBcJ_G0021693.1 mouse_genomes_project 15 7782215 7810306 + MGP_BALBcJ_P0040582 C1qtnf3 protein_coding protein_coding MGP_BALBcJ_T0040583.1 MGP_BALBcJ_G0021693.1 mouse_genomes_project 15 7782240 7809862 + MGP_BALBcJ_P0040583 C1qtnf3 protein_coding protein_coding MGP_BALBcJ_T0042023.1 MGP_BALBcJ_G0022146.1 mouse_genomes_project 15 82501142 82546776 + MGP_BALBcJ_P0042023 Arhgap8 protein_coding protein_coding MGP_BALBcJ_T0042024.1 MGP_BALBcJ_G0022146.1 mouse_genomes_project 15 82501142 82546776 + MGP_BALBcJ_P0042024 Arhgap8 protein_coding protein_coding MGP_BALBcJ_T0042025.1 MGP_BALBcJ_G0022146.1 mouse_genomes_project 15 82501173 82533874 + Arhgap8 protein_coding retained_intron MGP_BALBcJ_T0042026.1 MGP_BALBcJ_G0022146.1 mouse_genomes_project 15 82513824 82546773 + MGP_BALBcJ_P0042026 Arhgap8 protein_coding protein_coding MGP_BALBcJ_T0042027.1 MGP_BALBcJ_G0022146.1 mouse_genomes_project 15 82523420 82540772 + Arhgap8 protein_coding processed_transcript MGP_BALBcJ_T0042028.1 MGP_BALBcJ_G0022146.1 mouse_genomes_project 15 82544445 82546509 + Arhgap8 protein_coding retained_intron MGP_BALBcJ_T0042041.1 MGP_BALBcJ_G0022152.1 mouse_genomes_project 15 82816935 82843283 + MGP_BALBcJ_P0042041 Fam118a protein_coding protein_coding MGP_BALBcJ_T0040630.1 MGP_BALBcJ_G0021708.1 mouse_genomes_project 15 9884631 10026347 - MGP_BALBcJ_P0040630 Cdh6 protein_coding protein_coding MGP_BALBcJ_T0042449.1 MGP_BALBcJ_G0022280.1 mouse_genomes_project 15 96862989 96866613 - MGP_BALBcJ_P0042449 Rhebl1 protein_coding protein_coding MGP_BALBcJ_T0042450.1 MGP_BALBcJ_G0022280.1 mouse_genomes_project 15 96863257 96866299 - Rhebl1 protein_coding processed_transcript MGP_BALBcJ_T0042451.1 MGP_BALBcJ_G0022280.1 mouse_genomes_project 15 96864744 96865955 - Rhebl1 protein_coding retained_intron MGP_BALBcJ_T0041792.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78569603 78761237 - MGP_BALBcJ_P0041792 Mkl1 protein_coding protein_coding MGP_BALBcJ_T0041793.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78569603 78761213 - MGP_BALBcJ_P0041793 Mkl1 protein_coding protein_coding MGP_BALBcJ_T0041794.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78569613 78682331 - MGP_BALBcJ_P0041794 Mkl1 protein_coding protein_coding MGP_BALBcJ_T0041795.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78569613 78761203 - MGP_BALBcJ_P0041795 Mkl1 protein_coding protein_coding MGP_BALBcJ_T0041796.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78573176 78622112 - MGP_BALBcJ_P0041796 Mkl1 protein_coding protein_coding MGP_BALBcJ_T0041797.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78574085 78575511 - Mkl1 protein_coding retained_intron MGP_BALBcJ_T0041798.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78577560 78578625 - Mkl1 protein_coding retained_intron MGP_BALBcJ_T0041799.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78579811 78581302 - Mkl1 protein_coding retained_intron MGP_BALBcJ_T0041800.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78603180 78761208 - Mkl1 protein_coding retained_intron MGP_BALBcJ_T0041801.1 MGP_BALBcJ_G0022074.1 mouse_genomes_project 15 78621698 78761002 - Mkl1 protein_coding retained_intron MGP_BALBcJ_T0042672.1 MGP_BALBcJ_G0022362.1 mouse_genomes_project 15 100129268 100134465 + MGP_BALBcJ_P0042672 Krt18 protein_coding protein_coding MGP_BALBcJ_T0042393.1 MGP_BALBcJ_G0022258.1 mouse_genomes_project 15 96308358 96309276 - MGP_BALBcJ_P0042393 Olfr284 protein_coding protein_coding MGP_BALBcJ_T0042394.1 MGP_BALBcJ_G0022258.1 mouse_genomes_project 15 96308358 96309324 - MGP_BALBcJ_P0042394 Olfr284 protein_coding protein_coding MGP_BALBcJ_T0013043.1 MGP_BALBcJ_G0011140.1 mouse_genomes_project 15 42016883 42017225 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102253.1 MGP_BALBcJ_G0040069.1 mouse_genomes_project 15 72438957 72442115 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0041486.1 MGP_BALBcJ_G0021984.1 mouse_genomes_project 15 74225210 74240018 - MGP_BALBcJ_P0041486 Zfp647 protein_coding unknown_likely_coding MGP_BALBcJ_T0042406.1 MGP_BALBcJ_G0022263.1 mouse_genomes_project 15 96452968 96455262 - MGP_BALBcJ_P0042406 Lalba protein_coding protein_coding MGP_BALBcJ_T0042655.1 MGP_BALBcJ_G0022346.1 mouse_genomes_project 15 99656649 99667165 - MGP_BALBcJ_P0042655 Krt75 protein_coding protein_coding MGP_BALBcJ_T0099498.1 MGP_BALBcJ_G0037534.1 mouse_genomes_project 15 100480287 100480391 + Gm23590 snRNA snRNA MGP_BALBcJ_T0041980.1 MGP_BALBcJ_G0022134.1 mouse_genomes_project 15 81370169 81494615 - MGP_BALBcJ_P0041980 Scube1 protein_coding protein_coding MGP_BALBcJ_T0041981.1 MGP_BALBcJ_G0022134.1 mouse_genomes_project 15 81372585 81494615 - Scube1 protein_coding retained_intron MGP_BALBcJ_T0041982.1 MGP_BALBcJ_G0022134.1 mouse_genomes_project 15 81372589 81494615 - MGP_BALBcJ_P0041982 Scube1 protein_coding protein_coding MGP_BALBcJ_T0041983.1 MGP_BALBcJ_G0022134.1 mouse_genomes_project 15 81374092 81494615 - MGP_BALBcJ_P0041983 Scube1 protein_coding protein_coding MGP_BALBcJ_T0041984.1 MGP_BALBcJ_G0022134.1 mouse_genomes_project 15 81374092 81494615 - MGP_BALBcJ_P0041984 Scube1 protein_coding protein_coding MGP_BALBcJ_T0099454.1 MGP_BALBcJ_G0037490.1 mouse_genomes_project 15 27651425 27651488 + Gm24487 snRNA snRNA MGP_BALBcJ_T0042499.1 MGP_BALBcJ_G0022295.1 mouse_genomes_project 15 97420940 97456939 - MGP_BALBcJ_P0042499 Nckap5l protein_coding protein_coding MGP_BALBcJ_T0042500.1 MGP_BALBcJ_G0022295.1 mouse_genomes_project 15 97422516 97423439 - MGP_BALBcJ_P0042500 Nckap5l protein_coding protein_coding MGP_BALBcJ_T0042501.1 MGP_BALBcJ_G0022295.1 mouse_genomes_project 15 97422916 97423435 - Nckap5l protein_coding processed_transcript MGP_BALBcJ_T0042502.1 MGP_BALBcJ_G0022295.1 mouse_genomes_project 15 97428336 97456903 - MGP_BALBcJ_P0042502 Nckap5l protein_coding protein_coding MGP_BALBcJ_T0003587.1 MGP_BALBcJ_G0003254.1 mouse_genomes_project 15 64125327 64126828 + Gm17035 antisense antisense MGP_BALBcJ_T0042463.1 MGP_BALBcJ_G0022286.1 mouse_genomes_project 15 97077639 97080773 - MGP_BALBcJ_P0042463 C1ql4 protein_coding protein_coding MGP_BALBcJ_T0010053.1 MGP_BALBcJ_G0008178.1 mouse_genomes_project 15 80309581 80309641 - Gm27331 miRNA miRNA MGP_BALBcJ_T0040701.1 MGP_BALBcJ_G0021737.1 mouse_genomes_project 15 29243853 29244859 + MGP_BALBcJ_P0040701 Tas2r119 protein_coding protein_coding MGP_BALBcJ_T0098520.1 MGP_BALBcJ_G0036574.1 mouse_genomes_project 15 84988418 84988522 + n-R5s42 rRNA rRNA MGP_BALBcJ_T0100742.1 MGP_BALBcJ_G0038778.1 mouse_genomes_project 15 31194781 31194905 - Gm24500 snoRNA snoRNA MGP_BALBcJ_T0013076.1 MGP_BALBcJ_G0011173.1 mouse_genomes_project 15 89678986 89679523 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041847.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79404614 79429183 + MGP_BALBcJ_P0041847 Tef protein_coding protein_coding MGP_BALBcJ_T0041848.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79404900 79408243 + Tef protein_coding processed_transcript MGP_BALBcJ_T0041849.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79404923 79407548 + Tef protein_coding processed_transcript MGP_BALBcJ_T0041850.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79404930 79419206 + Tef protein_coding retained_intron MGP_BALBcJ_T0041851.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79405019 79408105 + Tef protein_coding processed_transcript MGP_BALBcJ_T0041852.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79413239 79423535 + MGP_BALBcJ_P0041852 Tef protein_coding protein_coding MGP_BALBcJ_T0041853.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79413607 79429020 + MGP_BALBcJ_P0041853 Tef protein_coding protein_coding MGP_BALBcJ_T0041854.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79414352 79417403 + MGP_BALBcJ_P0041854 Tef protein_coding protein_coding MGP_BALBcJ_T0041855.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79422871 79423662 + Tef protein_coding processed_transcript MGP_BALBcJ_T0041856.1 MGP_BALBcJ_G0022087.1 mouse_genomes_project 15 79423221 79426101 + Tef protein_coding retained_intron MGP_BALBcJ_T0010032.1 MGP_BALBcJ_G0008157.1 mouse_genomes_project 15 70384119 70384187 - Mir151 miRNA miRNA MGP_BALBcJ_T0041237.1 MGP_BALBcJ_G0021924.1 mouse_genomes_project 15 72998465 73008589 + MGP_BALBcJ_P0041237 Rhpn1 protein_coding protein_coding MGP_BALBcJ_T0041238.1 MGP_BALBcJ_G0021924.1 mouse_genomes_project 15 72998493 73008591 + Rhpn1 protein_coding retained_intron MGP_BALBcJ_T0041239.1 MGP_BALBcJ_G0021924.1 mouse_genomes_project 15 72998503 73008586 + Rhpn1 protein_coding retained_intron MGP_BALBcJ_T0041240.1 MGP_BALBcJ_G0021924.1 mouse_genomes_project 15 72998514 73008589 + MGP_BALBcJ_P0041240 Rhpn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041241.1 MGP_BALBcJ_G0021924.1 mouse_genomes_project 15 72998579 73008406 + MGP_BALBcJ_P0041241 Rhpn1 protein_coding protein_coding MGP_BALBcJ_T0010055.1 MGP_BALBcJ_G0008180.1 mouse_genomes_project 15 80348484 80348541 - Gm27463 miRNA miRNA MGP_BALBcJ_T0041183.1 MGP_BALBcJ_G0021909.1 mouse_genomes_project 15 72004474 72013250 - MGP_BALBcJ_P0041183 protein_coding protein_coding MGP_BALBcJ_T0041001.1 MGP_BALBcJ_G0021855.1 mouse_genomes_project 15 58048158 58051840 - MGP_BALBcJ_P0041001 A1bg protein_coding protein_coding MGP_BALBcJ_T0101862.1 MGP_BALBcJ_G0039775.1 mouse_genomes_project 15 72635462 72639686 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101863.1 MGP_BALBcJ_G0039775.1 mouse_genomes_project 15 72635822 72639293 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0010020.1 MGP_BALBcJ_G0008145.1 mouse_genomes_project 15 34493765 34493891 - Gm23654 miRNA miRNA MGP_BALBcJ_T0042664.1 MGP_BALBcJ_G0022354.1 mouse_genomes_project 15 99910645 99917939 - MGP_BALBcJ_P0042664 Krt2 protein_coding protein_coding MGP_BALBcJ_T0003583.1 MGP_BALBcJ_G0003250.1 mouse_genomes_project 15 54870922 54873026 - 9330154K18Rik antisense antisense MGP_BALBcJ_T0010085.1 MGP_BALBcJ_G0008210.1 mouse_genomes_project 15 101414140 101414237 + Mir148b miRNA miRNA MGP_BALBcJ_T0041756.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77827270 77939551 + MGP_BALBcJ_P0041756 Cacna1i protein_coding protein_coding MGP_BALBcJ_T0041757.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77827566 77937034 + MGP_BALBcJ_P0041757 Cacna1i protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041758.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77828006 77939561 + MGP_BALBcJ_P0041758 Cacna1i protein_coding unknown_likely_coding MGP_BALBcJ_T0041759.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77930178 77931768 + MGP_BALBcJ_P0041759 Cacna1i protein_coding protein_coding MGP_BALBcJ_T0041760.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77930178 77931768 + MGP_BALBcJ_P0041760 Cacna1i protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041761.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77930178 77935102 + MGP_BALBcJ_P0041761 Cacna1i protein_coding protein_coding MGP_BALBcJ_T0041762.1 MGP_BALBcJ_G0022066.1 mouse_genomes_project 15 77930178 77931768 + MGP_BALBcJ_P0041762 Cacna1i protein_coding protein_coding MGP_BALBcJ_T0010084.1 MGP_BALBcJ_G0008209.1 mouse_genomes_project 15 101142128 101142220 + Mir615 miRNA miRNA MGP_BALBcJ_T0041245.1 MGP_BALBcJ_G0021928.1 mouse_genomes_project 15 73182358 73191468 - MGP_BALBcJ_P0041245 Mroh6 protein_coding protein_coding MGP_BALBcJ_T0041703.1 MGP_BALBcJ_G0022052.1 mouse_genomes_project 15 77298903 77312119 - MGP_BALBcJ_P0041703 Dnal4 protein_coding protein_coding MGP_BALBcJ_T0041704.1 MGP_BALBcJ_G0022052.1 mouse_genomes_project 15 77298906 77312203 - MGP_BALBcJ_P0041704 Dnal4 protein_coding protein_coding MGP_BALBcJ_T0041705.1 MGP_BALBcJ_G0022052.1 mouse_genomes_project 15 77302437 77314716 - Dnal4 protein_coding processed_transcript MGP_BALBcJ_T0041706.1 MGP_BALBcJ_G0022052.1 mouse_genomes_project 15 77312307 77315593 - Dnal4 protein_coding processed_transcript MGP_BALBcJ_T0040675.1 MGP_BALBcJ_G0021726.1 mouse_genomes_project 15 24789145 25087754 - MGP_BALBcJ_P0040675 Trio protein_coding protein_coding MGP_BALBcJ_T0040545.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7024653 7177065 + Prlr protein_coding retained_intron MGP_BALBcJ_T0040546.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7024829 7199492 + Prlr protein_coding processed_transcript MGP_BALBcJ_T0040547.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7025061 7199762 + MGP_BALBcJ_P0040547 Prlr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040548.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7025070 7184679 + MGP_BALBcJ_P0040548 Prlr protein_coding protein_coding MGP_BALBcJ_T0040549.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7025196 7168530 + Prlr protein_coding retained_intron MGP_BALBcJ_T0040550.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7060818 7167818 + Prlr protein_coding processed_transcript MGP_BALBcJ_T0040551.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7063312 7167884 + MGP_BALBcJ_P0040551 Prlr protein_coding protein_coding MGP_BALBcJ_T0040552.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7071289 7200386 + MGP_BALBcJ_P0040552 Prlr protein_coding protein_coding MGP_BALBcJ_T0040553.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7071289 7193192 + MGP_BALBcJ_P0040553 Prlr protein_coding protein_coding MGP_BALBcJ_T0040554.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7071289 7196988 + MGP_BALBcJ_P0040554 Prlr protein_coding protein_coding MGP_BALBcJ_T0040555.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7096809 7171032 + MGP_BALBcJ_P0040555 Prlr protein_coding protein_coding MGP_BALBcJ_T0040556.1 MGP_BALBcJ_G0021685.1 mouse_genomes_project 15 7162652 7171014 + MGP_BALBcJ_P0040556 Prlr protein_coding protein_coding MGP_BALBcJ_T0041243.1 MGP_BALBcJ_G0021926.1 mouse_genomes_project 15 73049466 73138930 - MGP_BALBcJ_P0041243 Zc3h3 protein_coding protein_coding MGP_BALBcJ_T0042731.1 MGP_BALBcJ_G0022380.1 mouse_genomes_project 15 100578768 100580329 + MGP_BALBcJ_P0042731 Prr13 protein_coding protein_coding MGP_BALBcJ_T0042732.1 MGP_BALBcJ_G0022380.1 mouse_genomes_project 15 100578915 100582588 + MGP_BALBcJ_P0042732 Prr13 protein_coding protein_coding MGP_BALBcJ_T0042733.1 MGP_BALBcJ_G0022380.1 mouse_genomes_project 15 100578942 100582564 + MGP_BALBcJ_P0042733 Prr13 protein_coding protein_coding MGP_BALBcJ_T0042734.1 MGP_BALBcJ_G0022380.1 mouse_genomes_project 15 100578972 100582566 + MGP_BALBcJ_P0042734 Prr13 protein_coding protein_coding MGP_BALBcJ_T0042735.1 MGP_BALBcJ_G0022380.1 mouse_genomes_project 15 100579823 100582558 + MGP_BALBcJ_P0042735 Prr13 protein_coding protein_coding MGP_BALBcJ_T0010033.1 MGP_BALBcJ_G0008158.1 mouse_genomes_project 15 73367612 73367673 - Mir6952 miRNA miRNA MGP_BALBcJ_T0042782.1 MGP_BALBcJ_G0022389.1 mouse_genomes_project 15 100827024 100842424 - MGP_BALBcJ_P0042782 Calcoco1 protein_coding protein_coding MGP_BALBcJ_T0042783.1 MGP_BALBcJ_G0022389.1 mouse_genomes_project 15 100827217 100830148 - MGP_BALBcJ_P0042783 Calcoco1 protein_coding protein_coding MGP_BALBcJ_T0042784.1 MGP_BALBcJ_G0022389.1 mouse_genomes_project 15 100827830 100842377 - MGP_BALBcJ_P0042784 Calcoco1 protein_coding protein_coding MGP_BALBcJ_T0042785.1 MGP_BALBcJ_G0022389.1 mouse_genomes_project 15 100830470 100836042 - Calcoco1 protein_coding retained_intron MGP_BALBcJ_T0042778.1 MGP_BALBcJ_G0022388.1 mouse_genomes_project 15 100781395 100789660 - MGP_BALBcJ_P0042778 Atp5g2 protein_coding protein_coding MGP_BALBcJ_T0042779.1 MGP_BALBcJ_G0022388.1 mouse_genomes_project 15 100781545 100786282 - MGP_BALBcJ_P0042779 Atp5g2 protein_coding protein_coding MGP_BALBcJ_T0042780.1 MGP_BALBcJ_G0022388.1 mouse_genomes_project 15 100783270 100786276 - MGP_BALBcJ_P0042780 Atp5g2 protein_coding protein_coding MGP_BALBcJ_T0042781.1 MGP_BALBcJ_G0022388.1 mouse_genomes_project 15 100784332 100790885 - MGP_BALBcJ_P0042781 Atp5g2 protein_coding protein_coding MGP_BALBcJ_T0042748.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638314 100644215 + MGP_BALBcJ_P0042748 Tarbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042749.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638368 100641103 + Tarbp2 protein_coding retained_intron MGP_BALBcJ_T0042750.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638479 100644143 + MGP_BALBcJ_P0042750 Tarbp2 protein_coding protein_coding MGP_BALBcJ_T0042751.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638549 100644217 + Tarbp2 protein_coding retained_intron MGP_BALBcJ_T0042752.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638577 100641872 + MGP_BALBcJ_P0042752 Tarbp2 protein_coding protein_coding MGP_BALBcJ_T0042753.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638581 100644217 + MGP_BALBcJ_P0042753 Tarbp2 protein_coding protein_coding MGP_BALBcJ_T0042754.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638620 100639843 + Tarbp2 protein_coding retained_intron MGP_BALBcJ_T0042755.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638669 100644145 + MGP_BALBcJ_P0042755 Tarbp2 protein_coding protein_coding MGP_BALBcJ_T0042756.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638679 100643760 + Tarbp2 protein_coding processed_transcript MGP_BALBcJ_T0042757.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638690 100642462 + Tarbp2 protein_coding retained_intron MGP_BALBcJ_T0042758.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638848 100642674 + MGP_BALBcJ_P0042758 Tarbp2 protein_coding protein_coding MGP_BALBcJ_T0042759.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638921 100642203 + MGP_BALBcJ_P0042759 Tarbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042760.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100638924 100643443 + MGP_BALBcJ_P0042760 Tarbp2 protein_coding protein_coding MGP_BALBcJ_T0042761.1 MGP_BALBcJ_G0022384.1 mouse_genomes_project 15 100641162 100642563 + Tarbp2 protein_coding retained_intron MGP_BALBcJ_T0010038.1 MGP_BALBcJ_G0008163.1 mouse_genomes_project 15 76373196 76373270 + Mir6955 miRNA miRNA MGP_BALBcJ_T0042653.1 MGP_BALBcJ_G0022344.1 mouse_genomes_project 15 99633459 99644051 - MGP_BALBcJ_P0042653 Krt82 protein_coding protein_coding MGP_BALBcJ_T0003589.1 MGP_BALBcJ_G0003256.1 mouse_genomes_project 15 71840542 71841756 + 4933427E11Rik antisense antisense MGP_BALBcJ_T0003590.1 MGP_BALBcJ_G0003256.1 mouse_genomes_project 15 71840542 71841754 + 4933427E11Rik antisense antisense MGP_BALBcJ_T0041955.1 MGP_BALBcJ_G0022124.1 mouse_genomes_project 15 80882688 80907232 - MGP_BALBcJ_P0041955 Poldip3 protein_coding protein_coding MGP_BALBcJ_T0041956.1 MGP_BALBcJ_G0022124.1 mouse_genomes_project 15 80882688 80907285 - MGP_BALBcJ_P0041956 Poldip3 protein_coding protein_coding MGP_BALBcJ_T0041957.1 MGP_BALBcJ_G0022124.1 mouse_genomes_project 15 80889878 80907202 - MGP_BALBcJ_P0041957 Poldip3 protein_coding protein_coding MGP_BALBcJ_T0041958.1 MGP_BALBcJ_G0022124.1 mouse_genomes_project 15 80889973 80892620 - Poldip3 protein_coding retained_intron MGP_BALBcJ_T0041959.1 MGP_BALBcJ_G0022124.1 mouse_genomes_project 15 80892396 80907230 - Poldip3 protein_coding retained_intron MGP_BALBcJ_T0041960.1 MGP_BALBcJ_G0022124.1 mouse_genomes_project 15 80894536 80907237 - Poldip3 protein_coding retained_intron MGP_BALBcJ_T0042283.1 MGP_BALBcJ_G0022221.1 mouse_genomes_project 15 91268710 91362217 + MGP_BALBcJ_P0042283 Pphln1 protein_coding protein_coding MGP_BALBcJ_T0042284.1 MGP_BALBcJ_G0022221.1 mouse_genomes_project 15 91268710 91362217 + MGP_BALBcJ_P0042284 Pphln1 protein_coding protein_coding MGP_BALBcJ_T0042285.1 MGP_BALBcJ_G0022221.1 mouse_genomes_project 15 91268710 91362217 + MGP_BALBcJ_P0042285 Pphln1 protein_coding protein_coding MGP_BALBcJ_T0042286.1 MGP_BALBcJ_G0022221.1 mouse_genomes_project 15 91268824 91361802 + MGP_BALBcJ_P0042286 Pphln1 protein_coding protein_coding MGP_BALBcJ_T0042801.1 MGP_BALBcJ_G0022399.1 mouse_genomes_project 15 101280750 101285446 - MGP_BALBcJ_P0042801 Smug1 protein_coding protein_coding MGP_BALBcJ_T0006773.1 MGP_BALBcJ_G0005581.1 mouse_genomes_project 15 83370466 83383031 + AU022754 lincRNA lincRNA MGP_BALBcJ_T0010070.1 MGP_BALBcJ_G0008195.1 mouse_genomes_project 15 94350548 94350640 + Gm25397 miRNA miRNA MGP_BALBcJ_T0010028.1 MGP_BALBcJ_G0008153.1 mouse_genomes_project 15 59783721 59783791 - Gm24810 miRNA miRNA MGP_BALBcJ_T0006776.1 MGP_BALBcJ_G0005584.1 mouse_genomes_project 15 89445660 89452941 + 4933438A12Rik lincRNA lincRNA MGP_BALBcJ_T0041548.1 MGP_BALBcJ_G0022007.1 mouse_genomes_project 15 75849356 75860330 - MGP_BALBcJ_P0041548 Tex33 protein_coding protein_coding MGP_BALBcJ_T0041549.1 MGP_BALBcJ_G0022007.1 mouse_genomes_project 15 75849356 75867451 - MGP_BALBcJ_P0041549 Tex33 protein_coding protein_coding MGP_BALBcJ_T0041550.1 MGP_BALBcJ_G0022007.1 mouse_genomes_project 15 75849356 75867451 - MGP_BALBcJ_P0041550 Tex33 protein_coding protein_coding MGP_BALBcJ_T0013036.1 MGP_BALBcJ_G0011133.1 mouse_genomes_project 15 34455592 34456270 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041765.1 MGP_BALBcJ_G0022069.1 mouse_genomes_project 15 78219477 78248041 + MGP_BALBcJ_P0041765 Fam83f protein_coding protein_coding MGP_BALBcJ_T0042225.1 MGP_BALBcJ_G0022205.1 mouse_genomes_project 15 87409792 87416037 + MGP_BALBcJ_P0042225 Acr protein_coding protein_coding MGP_BALBcJ_T0100743.1 MGP_BALBcJ_G0038779.1 mouse_genomes_project 15 31346671 31346723 - Gm25809 snoRNA snoRNA MGP_BALBcJ_T0102259.1 MGP_BALBcJ_G0040075.1 mouse_genomes_project 15 72539019 72541195 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0040885.1 MGP_BALBcJ_G0021804.1 mouse_genomes_project 15 48973032 49054152 - MGP_BALBcJ_P0040885 Eif3h protein_coding protein_coding MGP_BALBcJ_T0042799.1 MGP_BALBcJ_G0022398.1 mouse_genomes_project 15 101146153 101163811 + MGP_BALBcJ_P0042799 Hoxc4 protein_coding protein_coding MGP_BALBcJ_T0042800.1 MGP_BALBcJ_G0022398.1 mouse_genomes_project 15 101161800 101164258 + MGP_BALBcJ_P0042800 Hoxc4 protein_coding protein_coding MGP_BALBcJ_T0010078.1 MGP_BALBcJ_G0008203.1 mouse_genomes_project 15 99722414 99742128 + miRNA miRNA MGP_BALBcJ_T0100768.1 MGP_BALBcJ_G0038804.1 mouse_genomes_project 15 92582035 92582167 - Gm25546 snoRNA snoRNA MGP_BALBcJ_T0013067.1 MGP_BALBcJ_G0011164.1 mouse_genomes_project 15 81805805 81806142 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0041901.1 MGP_BALBcJ_G0022100.1 mouse_genomes_project 15 79745132 79759386 + MGP_BALBcJ_P0041901 Ccdc134 protein_coding protein_coding MGP_BALBcJ_T0041168.1 MGP_BALBcJ_G0021901.1 mouse_genomes_project 15 71878073 71882003 - MGP_BALBcJ_P0041168 Slurp2 protein_coding protein_coding MGP_BALBcJ_T0041106.1 MGP_BALBcJ_G0021883.1 mouse_genomes_project 15 69704911 70190681 - MGP_BALBcJ_P0041106 Trappc9 protein_coding protein_coding MGP_BALBcJ_T0041107.1 MGP_BALBcJ_G0021883.1 mouse_genomes_project 15 69704911 70185293 - MGP_BALBcJ_P0041107 Trappc9 protein_coding protein_coding MGP_BALBcJ_T0041108.1 MGP_BALBcJ_G0021883.1 mouse_genomes_project 15 69922625 70190681 - MGP_BALBcJ_P0041108 Trappc9 protein_coding protein_coding MGP_BALBcJ_T0041109.1 MGP_BALBcJ_G0021883.1 mouse_genomes_project 15 69975388 70190681 - MGP_BALBcJ_P0041109 Trappc9 protein_coding protein_coding MGP_BALBcJ_T0003580.1 MGP_BALBcJ_G0003247.1 mouse_genomes_project 15 36809599 36824802 + Gm16291 antisense antisense MGP_BALBcJ_T0011362.1 MGP_BALBcJ_G0009487.1 mouse_genomes_project 15 14960447 14960755 + Gm22895 misc_RNA misc_RNA MGP_BALBcJ_T0041341.1 MGP_BALBcJ_G0021950.1 mouse_genomes_project 15 73641544 73644820 + MGP_BALBcJ_P0041341 Exosc4 protein_coding protein_coding MGP_BALBcJ_T0041342.1 MGP_BALBcJ_G0021950.1 mouse_genomes_project 15 73641738 73643237 + Exosc4 protein_coding processed_transcript MGP_BALBcJ_T0040954.1 MGP_BALBcJ_G0021831.1 mouse_genomes_project 15 55124369 55149648 + MGP_BALBcJ_P0040954 Fam83a protein_coding protein_coding MGP_BALBcJ_T0040955.1 MGP_BALBcJ_G0021831.1 mouse_genomes_project 15 55124860 55134577 + MGP_BALBcJ_P0040955 Fam83a protein_coding protein_coding MGP_BALBcJ_T0040956.1 MGP_BALBcJ_G0021831.1 mouse_genomes_project 15 55139796 55148686 + Fam83a protein_coding processed_transcript MGP_BALBcJ_T0010047.1 MGP_BALBcJ_G0008172.1 mouse_genomes_project 15 79175238 79175292 + Gm23880 miRNA miRNA MGP_BALBcJ_T0099480.1 MGP_BALBcJ_G0037516.1 mouse_genomes_project 15 73518755 73518860 - Gm25720 snRNA snRNA MGP_BALBcJ_T0006778.1 MGP_BALBcJ_G0005586.1 mouse_genomes_project 15 93993074 94021178 - D030018L15Rik lincRNA lincRNA MGP_BALBcJ_T0006779.1 MGP_BALBcJ_G0005586.1 mouse_genomes_project 15 93993074 94019885 - D030018L15Rik lincRNA lincRNA MGP_BALBcJ_T0006780.1 MGP_BALBcJ_G0005586.1 mouse_genomes_project 15 94015088 94021304 - D030018L15Rik lincRNA lincRNA MGP_BALBcJ_T0041508.1 MGP_BALBcJ_G0021991.1 mouse_genomes_project 15 74924559 74932727 - MGP_BALBcJ_P0041508 protein_coding protein_coding MGP_BALBcJ_T0041542.1 MGP_BALBcJ_G0022006.1 mouse_genomes_project 15 75693399 75713418 + MGP_BALBcJ_P0041542 Ncf4 protein_coding protein_coding MGP_BALBcJ_T0041543.1 MGP_BALBcJ_G0022006.1 mouse_genomes_project 15 75693442 75711826 + MGP_BALBcJ_P0041543 Ncf4 protein_coding protein_coding MGP_BALBcJ_T0041544.1 MGP_BALBcJ_G0022006.1 mouse_genomes_project 15 75701618 75704617 + Ncf4 protein_coding retained_intron MGP_BALBcJ_T0041545.1 MGP_BALBcJ_G0022006.1 mouse_genomes_project 15 75701832 75711601 + Ncf4 protein_coding processed_transcript MGP_BALBcJ_T0041546.1 MGP_BALBcJ_G0022006.1 mouse_genomes_project 15 75704038 75711634 + Ncf4 protein_coding retained_intron MGP_BALBcJ_T0041547.1 MGP_BALBcJ_G0022006.1 mouse_genomes_project 15 75711709 75713413 + Ncf4 protein_coding retained_intron MGP_BALBcJ_T0040745.1 MGP_BALBcJ_G0021754.1 mouse_genomes_project 15 32444538 33011905 + MGP_BALBcJ_P0040745 Vps13b protein_coding protein_coding MGP_BALBcJ_T0040562.1 MGP_BALBcJ_G0021688.1 mouse_genomes_project 15 7296949 7320136 - MGP_BALBcJ_P0040562 Dnajc21 protein_coding protein_coding MGP_BALBcJ_T0040563.1 MGP_BALBcJ_G0021688.1 mouse_genomes_project 15 7296958 7311289 - MGP_BALBcJ_P0040563 Dnajc21 protein_coding protein_coding MGP_BALBcJ_T0040564.1 MGP_BALBcJ_G0021688.1 mouse_genomes_project 15 7296959 7300186 - Dnajc21 protein_coding retained_intron MGP_BALBcJ_T0040565.1 MGP_BALBcJ_G0021688.1 mouse_genomes_project 15 7297889 7302104 - Dnajc21 protein_coding retained_intron MGP_BALBcJ_T0040566.1 MGP_BALBcJ_G0021688.1 mouse_genomes_project 15 7302757 7311810 - Dnajc21 protein_coding retained_intron MGP_BALBcJ_T0041964.1 MGP_BALBcJ_G0022126.1 mouse_genomes_project 15 80981964 81010441 - MGP_BALBcJ_P0041964 A4galt protein_coding protein_coding MGP_BALBcJ_T0041965.1 MGP_BALBcJ_G0022126.1 mouse_genomes_project 15 80981964 81010398 - MGP_BALBcJ_P0041965 A4galt protein_coding protein_coding MGP_BALBcJ_T0042021.1 MGP_BALBcJ_G0022144.1 mouse_genomes_project 15 82333563 82337984 - MGP_BALBcJ_P0042021 Ldoc1l protein_coding protein_coding MGP_BALBcJ_T0042661.1 MGP_BALBcJ_G0022352.1 mouse_genomes_project 15 99877043 99887649 - MGP_BALBcJ_P0042661 Krt72 protein_coding protein_coding MGP_BALBcJ_T0042662.1 MGP_BALBcJ_G0022352.1 mouse_genomes_project 15 99877204 99879565 - Krt72 protein_coding processed_transcript MGP_BALBcJ_T0040973.1 MGP_BALBcJ_G0021837.1 mouse_genomes_project 15 55314211 55353542 - MGP_BALBcJ_P0040973 Fbxo32 protein_coding protein_coding MGP_BALBcJ_T0042443.1 MGP_BALBcJ_G0022278.1 mouse_genomes_project 15 96796661 96816767 - MGP_BALBcJ_P0042443 Prkag1 protein_coding protein_coding MGP_BALBcJ_T0041573.1 MGP_BALBcJ_G0022017.1 mouse_genomes_project 15 76144742 76193177 - MGP_BALBcJ_P0041573 Elfn2 protein_coding protein_coding MGP_BALBcJ_T0042102.1 MGP_BALBcJ_G0022175.1 mouse_genomes_project 15 86688019 86691552 + MGP_BALBcJ_P0042102 Pim3 protein_coding protein_coding MGP_BALBcJ_T0041751.1 MGP_BALBcJ_G0022061.1 mouse_genomes_project 15 77672848 77701775 + MGP_BALBcJ_P0041751 Tab1 protein_coding protein_coding MGP_BALBcJ_T0042543.1 MGP_BALBcJ_G0022311.1 mouse_genomes_project 15 98045781 98229662 + MGP_BALBcJ_P0042543 Dip2b protein_coding protein_coding MGP_BALBcJ_T0042544.1 MGP_BALBcJ_G0022311.1 mouse_genomes_project 15 98164279 98225859 + MGP_BALBcJ_P0042544 Dip2b protein_coding protein_coding MGP_BALBcJ_T0042545.1 MGP_BALBcJ_G0022311.1 mouse_genomes_project 15 98164279 98229662 + MGP_BALBcJ_P0042545 Dip2b protein_coding protein_coding MGP_BALBcJ_T0042546.1 MGP_BALBcJ_G0022311.1 mouse_genomes_project 15 98213257 98215751 + Dip2b protein_coding processed_transcript MGP_BALBcJ_T0041491.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74352277 74364136 + MGP_BALBcJ_P0041491 Apol6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041492.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74352623 74360183 + MGP_BALBcJ_P0041492 Apol6 protein_coding protein_coding MGP_BALBcJ_T0041493.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74352754 74358526 + MGP_BALBcJ_P0041493 Apol6 protein_coding protein_coding MGP_BALBcJ_T0041494.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74352824 74364945 + MGP_BALBcJ_P0041494 Apol6 protein_coding protein_coding MGP_BALBcJ_T0041495.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74352826 74359147 + MGP_BALBcJ_P0041495 Apol6 protein_coding protein_coding MGP_BALBcJ_T0041496.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74353035 74353787 + Apol6 protein_coding processed_transcript MGP_BALBcJ_T0041497.1 MGP_BALBcJ_G0021987.1 mouse_genomes_project 15 74360585 74363882 + Apol6 protein_coding processed_transcript MGP_BALBcJ_T0042152.1 MGP_BALBcJ_G0022187.1 mouse_genomes_project 15 87007971 87022227 - MGP_BALBcJ_P0042152 Dennd6b protein_coding protein_coding MGP_BALBcJ_T0099490.1 MGP_BALBcJ_G0037526.1 mouse_genomes_project 15 86845520 86845679 + Gm23737 snRNA snRNA MGP_BALBcJ_T0013055.1 MGP_BALBcJ_G0011152.1 mouse_genomes_project 15 70038221 70038397 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0101854.1 MGP_BALBcJ_G0039771.1 mouse_genomes_project 15 60997335 61089172 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0011363.1 MGP_BALBcJ_G0009488.1 mouse_genomes_project 15 33111121 33111376 + Gm25372 misc_RNA misc_RNA MGP_BALBcJ_T0042064.1 MGP_BALBcJ_G0022162.1 mouse_genomes_project 15 83629371 83657921 + MGP_BALBcJ_P0042064 Ttc38 protein_coding protein_coding MGP_BALBcJ_T0042065.1 MGP_BALBcJ_G0022162.1 mouse_genomes_project 15 83629409 83656853 + Ttc38 protein_coding processed_transcript MGP_BALBcJ_T0042066.1 MGP_BALBcJ_G0022162.1 mouse_genomes_project 15 83629409 83641887 + MGP_BALBcJ_P0042066 Ttc38 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013065.1 MGP_BALBcJ_G0011162.1 mouse_genomes_project 15 78505278 78505673 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040702.1 MGP_BALBcJ_G0021738.1 mouse_genomes_project 15 29312996 29766096 + MGP_BALBcJ_P0040702 Sema5a protein_coding protein_coding MGP_BALBcJ_T0100751.1 MGP_BALBcJ_G0038787.1 mouse_genomes_project 15 41987295 41987438 + Gm23343 snoRNA snoRNA MGP_BALBcJ_T0010052.1 MGP_BALBcJ_G0008177.1 mouse_genomes_project 15 80240366 80240426 + Gm27924 miRNA miRNA MGP_BALBcJ_T0040739.1 MGP_BALBcJ_G0021751.1 mouse_genomes_project 15 31910175 31915132 + MGP_BALBcJ_P0040739 Kcns2 protein_coding protein_coding MGP_BALBcJ_T0041482.1 MGP_BALBcJ_G0021981.1 mouse_genomes_project 15 74191874 74206070 + MGP_BALBcJ_P0041482 Zfp7 protein_coding protein_coding MGP_BALBcJ_T0003621.1 MGP_BALBcJ_G0003279.1 mouse_genomes_project 15 98632729 98640259 + Gm20680 antisense antisense MGP_BALBcJ_T0010059.1 MGP_BALBcJ_G0008184.1 mouse_genomes_project 15 81940939 81941047 + Mir6392 miRNA miRNA MGP_BALBcJ_T0017426.1 MGP_BALBcJ_G0015238.1 mouse_genomes_project 15 65496643 65499358 - Gm26621 processed_transcript TEC MGP_BALBcJ_T0017427.1 MGP_BALBcJ_G0015238.1 mouse_genomes_project 15 65497064 65499338 - Gm26621 processed_transcript processed_transcript MGP_BALBcJ_T0042097.1 MGP_BALBcJ_G0022173.1 mouse_genomes_project 15 86627908 86638824 - Alg12 protein_coding retained_intron MGP_BALBcJ_T0042098.1 MGP_BALBcJ_G0022173.1 mouse_genomes_project 15 86627908 86641971 - MGP_BALBcJ_P0042098 Alg12 protein_coding protein_coding MGP_BALBcJ_T0042099.1 MGP_BALBcJ_G0022173.1 mouse_genomes_project 15 86627909 86641938 - MGP_BALBcJ_P0042099 Alg12 protein_coding protein_coding MGP_BALBcJ_T0042100.1 MGP_BALBcJ_G0022173.1 mouse_genomes_project 15 86637260 86641745 - MGP_BALBcJ_P0042100 Alg12 protein_coding protein_coding MGP_BALBcJ_T0040922.1 MGP_BALBcJ_G0021822.1 mouse_genomes_project 15 52460806 52671672 + MGP_BALBcJ_P0040922 Col14a1 protein_coding protein_coding MGP_BALBcJ_T0040923.1 MGP_BALBcJ_G0021822.1 mouse_genomes_project 15 52460806 52671671 + MGP_BALBcJ_P0040923 Col14a1 protein_coding protein_coding MGP_BALBcJ_T0040924.1 MGP_BALBcJ_G0021822.1 mouse_genomes_project 15 52460807 52671670 + MGP_BALBcJ_P0040924 Col14a1 protein_coding protein_coding MGP_BALBcJ_T0040925.1 MGP_BALBcJ_G0021822.1 mouse_genomes_project 15 52599753 52670558 + MGP_BALBcJ_P0040925 Col14a1 protein_coding protein_coding MGP_BALBcJ_T0040494.1 MGP_BALBcJ_G0021670.1 mouse_genomes_project 15 4630885 4658093 + MGP_BALBcJ_P0040494 Gdnf protein_coding protein_coding MGP_BALBcJ_T0041632.1 MGP_BALBcJ_G0022033.1 mouse_genomes_project 15 76629173 76638927 + MGP_BALBcJ_P0041632 Polr2f protein_coding protein_coding MGP_BALBcJ_T0041056.1 MGP_BALBcJ_G0021868.1 mouse_genomes_project 15 63114963 63168172 - MGP_BALBcJ_P0041056 Hhla1 protein_coding protein_coding MGP_BALBcJ_T0006782.1 MGP_BALBcJ_G0005588.1 mouse_genomes_project 15 94175219 94184762 - 4833422M21Rik lincRNA lincRNA MGP_BALBcJ_T0006783.1 MGP_BALBcJ_G0005588.1 mouse_genomes_project 15 94175219 94198826 - 4833422M21Rik lincRNA lincRNA MGP_BALBcJ_T0006784.1 MGP_BALBcJ_G0005588.1 mouse_genomes_project 15 94193099 94198758 - 4833422M21Rik lincRNA lincRNA MGP_BALBcJ_T0040693.1 MGP_BALBcJ_G0021735.1 mouse_genomes_project 15 28652240 28663288 - MGP_BALBcJ_P0040693 Cct5 protein_coding protein_coding MGP_BALBcJ_T0040694.1 MGP_BALBcJ_G0021735.1 mouse_genomes_project 15 28653422 28654502 - Cct5 protein_coding retained_intron MGP_BALBcJ_T0040695.1 MGP_BALBcJ_G0021735.1 mouse_genomes_project 15 28654885 28655969 - Cct5 protein_coding retained_intron MGP_BALBcJ_T0040696.1 MGP_BALBcJ_G0021735.1 mouse_genomes_project 15 28655785 28662980 - MGP_BALBcJ_P0040696 Cct5 protein_coding protein_coding MGP_BALBcJ_T0040697.1 MGP_BALBcJ_G0021735.1 mouse_genomes_project 15 28656881 28663181 - Cct5 protein_coding retained_intron MGP_BALBcJ_T0101855.1 MGP_BALBcJ_G0039772.1 mouse_genomes_project 15 60997335 60999688 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101856.1 MGP_BALBcJ_G0039772.1 mouse_genomes_project 15 60997349 60999568 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101857.1 MGP_BALBcJ_G0039772.1 mouse_genomes_project 15 60998357 61145496 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0099459.1 MGP_BALBcJ_G0037495.1 mouse_genomes_project 15 41489445 41489552 + Gm22392 snRNA snRNA MGP_BALBcJ_T0010044.1 MGP_BALBcJ_G0008169.1 mouse_genomes_project 15 77619282 77619390 - Snord43 miRNA miRNA MGP_BALBcJ_T0041051.1 MGP_BALBcJ_G0021867.1 mouse_genomes_project 15 63065523 63103627 - MGP_BALBcJ_P0041051 Oc90 protein_coding protein_coding MGP_BALBcJ_T0041052.1 MGP_BALBcJ_G0021867.1 mouse_genomes_project 15 63065523 63103770 - MGP_BALBcJ_P0041052 Oc90 protein_coding protein_coding MGP_BALBcJ_T0041053.1 MGP_BALBcJ_G0021867.1 mouse_genomes_project 15 63065523 63090659 - MGP_BALBcJ_P0041053 Oc90 protein_coding protein_coding MGP_BALBcJ_T0041054.1 MGP_BALBcJ_G0021867.1 mouse_genomes_project 15 63065862 63080191 - MGP_BALBcJ_P0041054 Oc90 protein_coding protein_coding MGP_BALBcJ_T0041055.1 MGP_BALBcJ_G0021867.1 mouse_genomes_project 15 63065990 63077367 - MGP_BALBcJ_P0041055 Oc90 protein_coding protein_coding MGP_BALBcJ_T0013059.1 MGP_BALBcJ_G0011156.1 mouse_genomes_project 15 73152247 73153657 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042355.1 MGP_BALBcJ_G0022246.1 mouse_genomes_project 15 95818534 95872631 - MGP_BALBcJ_P0042355 Vdr protein_coding protein_coding MGP_BALBcJ_T0042356.1 MGP_BALBcJ_G0022246.1 mouse_genomes_project 15 95821646 95823811 - Vdr protein_coding retained_intron MGP_BALBcJ_T0042357.1 MGP_BALBcJ_G0022246.1 mouse_genomes_project 15 95840900 95861134 - MGP_BALBcJ_P0042357 Vdr protein_coding protein_coding MGP_BALBcJ_T0042358.1 MGP_BALBcJ_G0022246.1 mouse_genomes_project 15 95840972 95874924 - MGP_BALBcJ_P0042358 Vdr protein_coding protein_coding MGP_BALBcJ_T0042359.1 MGP_BALBcJ_G0022246.1 mouse_genomes_project 15 95848999 95874924 - MGP_BALBcJ_P0042359 Vdr protein_coding protein_coding MGP_BALBcJ_T0042360.1 MGP_BALBcJ_G0022246.1 mouse_genomes_project 15 95849011 95873867 - MGP_BALBcJ_P0042360 Vdr protein_coding protein_coding MGP_BALBcJ_T0040762.1 MGP_BALBcJ_G0021762.1 mouse_genomes_project 15 33575072 33594196 - MGP_BALBcJ_P0040762 Ankrd46 protein_coding protein_coding MGP_BALBcJ_T0041517.1 MGP_BALBcJ_G0021998.1 mouse_genomes_project 15 75193062 75198328 - MGP_BALBcJ_P0041517 Apol8 protein_coding protein_coding MGP_BALBcJ_T0041518.1 MGP_BALBcJ_G0021998.1 mouse_genomes_project 15 75193876 75200487 - MGP_BALBcJ_P0041518 Apol8 protein_coding protein_coding MGP_BALBcJ_T0042237.1 MGP_BALBcJ_G0022207.1 mouse_genomes_project 15 87633970 87693227 - MGP_BALBcJ_P0042237 Syt10 protein_coding protein_coding MGP_BALBcJ_T0041552.1 MGP_BALBcJ_G0022009.1 mouse_genomes_project 15 75878416 75885708 + MGP_BALBcJ_P0041552 Mpst protein_coding protein_coding MGP_BALBcJ_T0041553.1 MGP_BALBcJ_G0022009.1 mouse_genomes_project 15 75878505 75885708 + MGP_BALBcJ_P0041553 Mpst protein_coding protein_coding MGP_BALBcJ_T0041554.1 MGP_BALBcJ_G0022009.1 mouse_genomes_project 15 75878810 75885708 + MGP_BALBcJ_P0041554 Mpst protein_coding protein_coding MGP_BALBcJ_T0040678.1 MGP_BALBcJ_G0021729.1 mouse_genomes_project 15 28266272 28315591 + MGP_BALBcJ_P0040678 Dap protein_coding protein_coding MGP_BALBcJ_T0040679.1 MGP_BALBcJ_G0021729.1 mouse_genomes_project 15 28266346 28316628 + MGP_BALBcJ_P0040679 Dap protein_coding protein_coding MGP_BALBcJ_T0040680.1 MGP_BALBcJ_G0021729.1 mouse_genomes_project 15 28266377 28315746 + MGP_BALBcJ_P0040680 Dap protein_coding protein_coding MGP_BALBcJ_T0040681.1 MGP_BALBcJ_G0021729.1 mouse_genomes_project 15 28310623 28315671 + MGP_BALBcJ_P0040681 Dap protein_coding protein_coding MGP_BALBcJ_T0041971.1 MGP_BALBcJ_G0022129.1 mouse_genomes_project 15 81250538 81277788 - MGP_BALBcJ_P0041971 Ttll1 protein_coding protein_coding MGP_BALBcJ_T0041972.1 MGP_BALBcJ_G0022129.1 mouse_genomes_project 15 81269245 81277709 - MGP_BALBcJ_P0041972 Ttll1 protein_coding protein_coding MGP_BALBcJ_T0041973.1 MGP_BALBcJ_G0022129.1 mouse_genomes_project 15 81272359 81277799 - Ttll1 protein_coding processed_transcript MGP_BALBcJ_T0000941.1 MGP_BALBcJ_G0000872.1 mouse_genomes_project 15 101513439 101513776 + TEC TEC MGP_BALBcJ_T0040446.1 MGP_BALBcJ_G0021661.1 mouse_genomes_project 15 2028409 2063487 + MGP_BALBcJ_P0040446 Ttc33 protein_coding protein_coding MGP_BALBcJ_T0040447.1 MGP_BALBcJ_G0021661.1 mouse_genomes_project 15 2029168 2060375 + MGP_BALBcJ_P0040447 Ttc33 protein_coding protein_coding MGP_BALBcJ_T0040448.1 MGP_BALBcJ_G0021661.1 mouse_genomes_project 15 2030363 2054916 + MGP_BALBcJ_P0040448 Ttc33 protein_coding protein_coding MGP_BALBcJ_T0098517.1 MGP_BALBcJ_G0036571.1 mouse_genomes_project 15 36156077 36156185 - n-R5s39 rRNA rRNA MGP_BALBcJ_T0003620.1 MGP_BALBcJ_G0003278.1 mouse_genomes_project 15 97977684 97978808 - 2310068J16Rik antisense antisense MGP_BALBcJ_T0100746.1 MGP_BALBcJ_G0038782.1 mouse_genomes_project 15 35183685 35183821 + Gm22353 snoRNA snoRNA MGP_BALBcJ_T0042648.1 MGP_BALBcJ_G0022340.1 mouse_genomes_project 15 99532007 99537434 - MGP_BALBcJ_P0042648 Krt81 protein_coding protein_coding MGP_BALBcJ_T0042736.1 MGP_BALBcJ_G0022381.1 mouse_genomes_project 15 100590720 100619884 + MGP_BALBcJ_P0042736 Pcbp2 protein_coding protein_coding MGP_BALBcJ_T0042737.1 MGP_BALBcJ_G0022381.1 mouse_genomes_project 15 100590720 100619884 + MGP_BALBcJ_P0042737 Pcbp2 protein_coding protein_coding MGP_BALBcJ_T0042738.1 MGP_BALBcJ_G0022381.1 mouse_genomes_project 15 100590720 100619884 + MGP_BALBcJ_P0042738 Pcbp2 protein_coding protein_coding MGP_BALBcJ_T0100756.1 MGP_BALBcJ_G0038792.1 mouse_genomes_project 15 55284151 55284278 + Gm22488 snoRNA snoRNA MGP_BALBcJ_T0017419.1 MGP_BALBcJ_G0015234.1 mouse_genomes_project 15 57953218 57960011 + 9930014A18Rik processed_transcript antisense MGP_BALBcJ_T0017420.1 MGP_BALBcJ_G0015234.1 mouse_genomes_project 15 57953899 57956559 + 9930014A18Rik processed_transcript TEC MGP_BALBcJ_T0017421.1 MGP_BALBcJ_G0015234.1 mouse_genomes_project 15 57954348 57954886 + 9930014A18Rik processed_transcript antisense MGP_BALBcJ_T0017422.1 MGP_BALBcJ_G0015234.1 mouse_genomes_project 15 57955287 57963152 + 9930014A18Rik processed_transcript antisense MGP_BALBcJ_T0042624.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99189688 99208097 + MGP_BALBcJ_P0042624 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042625.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99189703 99196235 + MGP_BALBcJ_P0042625 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042626.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99189717 99206395 + MGP_BALBcJ_P0042626 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042627.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99189717 99196855 + MGP_BALBcJ_P0042627 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042628.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99189740 99206394 + MGP_BALBcJ_P0042628 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042629.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99190088 99206396 + MGP_BALBcJ_P0042629 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042630.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99190090 99206394 + MGP_BALBcJ_P0042630 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042631.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99194956 99197006 + MGP_BALBcJ_P0042631 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042632.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99195673 99208097 + MGP_BALBcJ_P0042632 Acvrl1 protein_coding protein_coding MGP_BALBcJ_T0042633.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99197191 99198565 + Acvrl1 protein_coding retained_intron MGP_BALBcJ_T0042634.1 MGP_BALBcJ_G0022331.1 mouse_genomes_project 15 99199132 99205326 + Acvrl1 protein_coding processed_transcript MGP_BALBcJ_T0006774.1 MGP_BALBcJ_G0005582.1 mouse_genomes_project 15 83429970 83436155 + D130051D11Rik lincRNA lincRNA MGP_BALBcJ_T0040720.1 MGP_BALBcJ_G0021745.1 mouse_genomes_project 15 31416227 31423692 - MGP_BALBcJ_P0040720 9430069I07Rik protein_coding protein_coding MGP_BALBcJ_T0011369.1 MGP_BALBcJ_G0009494.1 mouse_genomes_project 15 59314163 59314290 + Gm27957 misc_RNA misc_RNA MGP_BALBcJ_T0042396.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369881 96384589 + MGP_BALBcJ_P0042396 1700031M16Rik protein_coding protein_coding MGP_BALBcJ_T0042397.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369888 96387263 + MGP_BALBcJ_P0042397 1700031M16Rik protein_coding protein_coding MGP_BALBcJ_T0042398.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369907 96383800 + 1700031M16Rik protein_coding processed_transcript MGP_BALBcJ_T0042399.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369907 96386383 + 1700031M16Rik protein_coding processed_transcript MGP_BALBcJ_T0042400.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369907 96386383 + 1700031M16Rik protein_coding processed_transcript MGP_BALBcJ_T0042401.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369907 96387134 + MGP_BALBcJ_P0042401 1700031M16Rik protein_coding protein_coding MGP_BALBcJ_T0042402.1 MGP_BALBcJ_G0022260.1 mouse_genomes_project 15 96369907 96387267 + MGP_BALBcJ_P0042402 1700031M16Rik protein_coding protein_coding MGP_BALBcJ_T0010048.1 MGP_BALBcJ_G0008173.1 mouse_genomes_project 15 79815396 79815465 + Mir33 miRNA miRNA MGP_BALBcJ_T0041037.1 MGP_BALBcJ_G0021864.1 mouse_genomes_project 15 62040627 62163636 + MGP_BALBcJ_P0041037 Gm21798 protein_coding protein_coding MGP_BALBcJ_T0010050.1 MGP_BALBcJ_G0008175.1 mouse_genomes_project 15 80033331 80033417 + Gm25990 miRNA miRNA MGP_BALBcJ_T0040426.1 MGP_BALBcJ_G0021652.1 mouse_genomes_project 15 881031 1015855 + MGP_BALBcJ_P0040426 Oxct1 protein_coding protein_coding MGP_BALBcJ_T0040427.1 MGP_BALBcJ_G0021652.1 mouse_genomes_project 15 881332 1014474 + MGP_BALBcJ_P0040427 Oxct1 protein_coding protein_coding MGP_BALBcJ_T0040428.1 MGP_BALBcJ_G0021652.1 mouse_genomes_project 15 901805 947878 + Oxct1 protein_coding processed_transcript MGP_BALBcJ_T0040429.1 MGP_BALBcJ_G0021652.1 mouse_genomes_project 15 999363 1014491 + Oxct1 protein_coding processed_transcript MGP_BALBcJ_T0040430.1 MGP_BALBcJ_G0021652.1 mouse_genomes_project 15 999652 1014470 + Oxct1 protein_coding processed_transcript MGP_BALBcJ_T0003574.1 MGP_BALBcJ_G0003243.1 mouse_genomes_project 15 3136049 3142715 - Gm16311 antisense antisense MGP_BALBcJ_T0042818.1 MGP_BALBcJ_G0022404.1 mouse_genomes_project 15 101437205 101439406 - MGP_BALBcJ_P0042818 Gpr84 protein_coding protein_coding MGP_BALBcJ_T0013066.1 MGP_BALBcJ_G0011163.1 mouse_genomes_project 15 79273745 79274369 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006790.1 MGP_BALBcJ_G0005593.1 mouse_genomes_project 15 99286630 99289556 - A330009N23Rik lincRNA lincRNA MGP_BALBcJ_T0040998.1 MGP_BALBcJ_G0021853.1 mouse_genomes_project 15 57184361 57186114 - MGP_BALBcJ_P0040998 4933412E24Rik protein_coding protein_coding MGP_BALBcJ_T0006794.1 MGP_BALBcJ_G0005596.1 mouse_genomes_project 15 100575300 100603834 - Gm26518 lincRNA lincRNA MGP_BALBcJ_T0041485.1 MGP_BALBcJ_G0021983.1 mouse_genomes_project 15 74217333 74219581 + MGP_BALBcJ_P0041485 Rpl8 protein_coding protein_coding MGP_BALBcJ_T0040586.1 MGP_BALBcJ_G0021696.1 mouse_genomes_project 15 7864279 7868554 - MGP_BALBcJ_P0040586 Rxfp3 protein_coding protein_coding MGP_BALBcJ_T0042306.1 MGP_BALBcJ_G0022229.1 mouse_genomes_project 15 93533263 93566790 - MGP_BALBcJ_P0042306 Dbx2 protein_coding protein_coding MGP_BALBcJ_T0041571.1 MGP_BALBcJ_G0022015.1 mouse_genomes_project 15 76031273 76046618 - MGP_BALBcJ_P0041571 Rac2 protein_coding protein_coding MGP_BALBcJ_T0041923.1 MGP_BALBcJ_G0022111.1 mouse_genomes_project 15 79975292 79980596 - MGP_BALBcJ_P0041923 Ndufa6 protein_coding protein_coding MGP_BALBcJ_T0100760.1 MGP_BALBcJ_G0038796.1 mouse_genomes_project 15 66591992 66592124 - Gm24232 snoRNA snoRNA MGP_BALBcJ_T0042324.1 MGP_BALBcJ_G0022239.1 mouse_genomes_project 15 95200884 95204098 - MGP_BALBcJ_P0042324 Amigo2 protein_coding protein_coding MGP_BALBcJ_T0011368.1 MGP_BALBcJ_G0009493.1 mouse_genomes_project 15 59246003 59246089 + Gm27718 misc_RNA misc_RNA MGP_BALBcJ_T0098844.1 MGP_BALBcJ_G0036894.1 mouse_genomes_project 15 69928705 69933419 - Peg13 sense_intronic sense_intronic MGP_BALBcJ_T0041974.1 MGP_BALBcJ_G0022130.1 mouse_genomes_project 15 81293771 81311539 + MGP_BALBcJ_P0041974 Bik protein_coding protein_coding MGP_BALBcJ_T0017433.1 MGP_BALBcJ_G0015243.1 mouse_genomes_project 15 77277013 77279238 + Gm16575 processed_transcript processed_transcript MGP_BALBcJ_T0099495.1 MGP_BALBcJ_G0037531.1 mouse_genomes_project 15 97364206 97364313 - Gm22951 snRNA snRNA MGP_BALBcJ_T0010021.1 MGP_BALBcJ_G0008146.1 mouse_genomes_project 15 35366305 35366414 + Gm25381 miRNA miRNA MGP_BALBcJ_T0041966.1 MGP_BALBcJ_G0022127.1 mouse_genomes_project 15 81060647 81111631 - MGP_BALBcJ_P0041966 Arfgap3 protein_coding protein_coding MGP_BALBcJ_T0041967.1 MGP_BALBcJ_G0022127.1 mouse_genomes_project 15 81061592 81111591 - MGP_BALBcJ_P0041967 Arfgap3 protein_coding unknown_likely_coding MGP_BALBcJ_T0099465.1 MGP_BALBcJ_G0037501.1 mouse_genomes_project 15 49686784 49686888 + Gm23545 snRNA snRNA MGP_BALBcJ_T0041287.1 MGP_BALBcJ_G0021940.1 mouse_genomes_project 15 73349940 73372502 - MGP_BALBcJ_P0041287 Scrib protein_coding protein_coding MGP_BALBcJ_T0041288.1 MGP_BALBcJ_G0021940.1 mouse_genomes_project 15 73349942 73372472 - MGP_BALBcJ_P0041288 Scrib protein_coding protein_coding MGP_BALBcJ_T0041289.1 MGP_BALBcJ_G0021940.1 mouse_genomes_project 15 73349942 73372472 - MGP_BALBcJ_P0041289 Scrib protein_coding protein_coding MGP_BALBcJ_T0041290.1 MGP_BALBcJ_G0021940.1 mouse_genomes_project 15 73349942 73365504 - MGP_BALBcJ_P0041290 Scrib protein_coding protein_coding MGP_BALBcJ_T0041291.1 MGP_BALBcJ_G0021940.1 mouse_genomes_project 15 73351724 73353571 - MGP_BALBcJ_P0041291 Scrib protein_coding protein_coding MGP_BALBcJ_T0041292.1 MGP_BALBcJ_G0021940.1 mouse_genomes_project 15 73351987 73353571 - MGP_BALBcJ_P0041292 Scrib protein_coding protein_coding MGP_BALBcJ_T0099455.1 MGP_BALBcJ_G0037491.1 mouse_genomes_project 15 31604031 31604141 + Gm22208 snRNA snRNA MGP_BALBcJ_T0042042.1 MGP_BALBcJ_G0022153.1 mouse_genomes_project 15 82845145 82910920 - MGP_BALBcJ_P0042042 Smc1b protein_coding protein_coding MGP_BALBcJ_T0041246.1 MGP_BALBcJ_G0021929.1 mouse_genomes_project 15 73193654 73197172 - MGP_BALBcJ_P0041246 Naprt protein_coding protein_coding MGP_BALBcJ_T0040864.1 MGP_BALBcJ_G0021800.1 mouse_genomes_project 15 41716057 41833478 - MGP_BALBcJ_P0040864 Sybu protein_coding protein_coding MGP_BALBcJ_T0040865.1 MGP_BALBcJ_G0021800.1 mouse_genomes_project 15 41716057 41833478 - MGP_BALBcJ_P0040865 Sybu protein_coding protein_coding MGP_BALBcJ_T0040866.1 MGP_BALBcJ_G0021800.1 mouse_genomes_project 15 41716057 41796650 - MGP_BALBcJ_P0040866 Sybu protein_coding protein_coding MGP_BALBcJ_T0000930.1 MGP_BALBcJ_G0000861.1 mouse_genomes_project 15 18247521 18247942 + TEC TEC MGP_BALBcJ_T0040820.1 MGP_BALBcJ_G0021777.1 mouse_genomes_project 15 35936421 35953631 + MGP_BALBcJ_P0040820 Baalc protein_coding protein_coding MGP_BALBcJ_T0013053.1 MGP_BALBcJ_G0011150.1 mouse_genomes_project 15 62239971 62240283 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040983.1 MGP_BALBcJ_G0021844.1 mouse_genomes_project 15 56026121 56030254 + MGP_BALBcJ_P0040983 Trmt12 protein_coding protein_coding MGP_BALBcJ_T0042638.1 MGP_BALBcJ_G0022335.1 mouse_genomes_project 15 99349855 99356489 + MGP_BALBcJ_P0042638 Atg101 protein_coding protein_coding MGP_BALBcJ_T0040944.1 MGP_BALBcJ_G0021828.1 mouse_genomes_project 15 54829027 54977446 + MGP_BALBcJ_P0040944 Zhx2 protein_coding protein_coding MGP_BALBcJ_T0040945.1 MGP_BALBcJ_G0021828.1 mouse_genomes_project 15 54830100 54958631 + Zhx2 protein_coding processed_transcript MGP_BALBcJ_T0041169.1 MGP_BALBcJ_G0021902.1 mouse_genomes_project 15 71883161 71888356 - MGP_BALBcJ_P0041169 Lynx1 protein_coding protein_coding MGP_BALBcJ_T0041170.1 MGP_BALBcJ_G0021902.1 mouse_genomes_project 15 71886904 71888324 - MGP_BALBcJ_P0041170 Lynx1 protein_coding protein_coding MGP_BALBcJ_T0041171.1 MGP_BALBcJ_G0021902.1 mouse_genomes_project 15 71887628 71888334 - Lynx1 protein_coding retained_intron MGP_BALBcJ_T0100745.1 MGP_BALBcJ_G0038781.1 mouse_genomes_project 15 32550334 32550471 + Gm24771 snoRNA snoRNA MGP_BALBcJ_T0042639.1 MGP_BALBcJ_G0022336.1 mouse_genomes_project 15 99417788 99438215 - MGP_BALBcJ_P0042639 Krt80 protein_coding protein_coding MGP_BALBcJ_T0040751.1 MGP_BALBcJ_G0021756.1 mouse_genomes_project 15 33089067 33227785 - MGP_BALBcJ_P0040751 Rgs22 protein_coding protein_coding MGP_BALBcJ_T0040752.1 MGP_BALBcJ_G0021756.1 mouse_genomes_project 15 33089158 33125947 - MGP_BALBcJ_P0040752 Rgs22 protein_coding protein_coding MGP_BALBcJ_T0040753.1 MGP_BALBcJ_G0021756.1 mouse_genomes_project 15 33089921 33199370 - MGP_BALBcJ_P0040753 Rgs22 protein_coding protein_coding MGP_BALBcJ_T0040754.1 MGP_BALBcJ_G0021756.1 mouse_genomes_project 15 33134148 33172043 - MGP_BALBcJ_P0040754 Rgs22 protein_coding protein_coding MGP_BALBcJ_T0040755.1 MGP_BALBcJ_G0021756.1 mouse_genomes_project 15 33226615 33227770 - Rgs22 protein_coding retained_intron MGP_BALBcJ_T0041994.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81640163 81827803 - MGP_BALBcJ_P0041994 Efcab6 protein_coding unknown_likely_coding MGP_BALBcJ_T0041995.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81640169 81839122 - MGP_BALBcJ_P0041995 Efcab6 protein_coding protein_coding MGP_BALBcJ_T0041996.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81640171 81695632 - Efcab6 protein_coding processed_transcript MGP_BALBcJ_T0041997.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81640224 81708166 - Efcab6 protein_coding retained_intron MGP_BALBcJ_T0041998.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81645829 81659804 - Efcab6 protein_coding processed_transcript MGP_BALBcJ_T0041999.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81700770 81718671 - MGP_BALBcJ_P0041999 Efcab6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042000.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81737582 81740227 - Efcab6 protein_coding processed_transcript MGP_BALBcJ_T0042001.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81744867 81761358 - Efcab6 protein_coding processed_transcript MGP_BALBcJ_T0042002.1 MGP_BALBcJ_G0022136.1 mouse_genomes_project 15 81794166 81839152 - Efcab6 protein_coding processed_transcript MGP_BALBcJ_T0040466.1 MGP_BALBcJ_G0021664.1 mouse_genomes_project 15 3284008 3337211 + MGP_BALBcJ_P0040466 C9 protein_coding protein_coding MGP_BALBcJ_T0040467.1 MGP_BALBcJ_G0021664.1 mouse_genomes_project 15 3284053 3306967 + MGP_BALBcJ_P0040467 C9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040468.1 MGP_BALBcJ_G0021664.1 mouse_genomes_project 15 3327729 3329672 + C9 protein_coding retained_intron MGP_BALBcJ_T0040469.1 MGP_BALBcJ_G0021664.1 mouse_genomes_project 15 3328167 3337204 + MGP_BALBcJ_P0040469 C9 protein_coding protein_coding MGP_BALBcJ_T0041540.1 MGP_BALBcJ_G0022005.1 mouse_genomes_project 15 75639447 75652567 - MGP_BALBcJ_P0041540 Pvalb protein_coding protein_coding MGP_BALBcJ_T0041541.1 MGP_BALBcJ_G0022005.1 mouse_genomes_project 15 75639450 75654730 - MGP_BALBcJ_P0041541 Pvalb protein_coding protein_coding MGP_BALBcJ_T0010023.1 MGP_BALBcJ_G0008148.1 mouse_genomes_project 15 36320100 36320209 - Gm24098 miRNA miRNA MGP_BALBcJ_T0006741.1 MGP_BALBcJ_G0005565.1 mouse_genomes_project 15 41833196 41845320 + lincRNA lincRNA MGP_BALBcJ_T0041266.1 MGP_BALBcJ_G0021932.1 mouse_genomes_project 15 73219740 73224843 - MGP_BALBcJ_P0041266 Pycrl protein_coding protein_coding MGP_BALBcJ_T0013040.1 MGP_BALBcJ_G0011137.1 mouse_genomes_project 15 36185079 36186010 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0040689.1 MGP_BALBcJ_G0021733.1 mouse_genomes_project 15 28500131 28591148 - MGP_BALBcJ_P0040689 March6 protein_coding protein_coding MGP_BALBcJ_T0042022.1 MGP_BALBcJ_G0022145.1 mouse_genomes_project 15 82461449 82487359 + MGP_BALBcJ_P0042022 Prr5 protein_coding protein_coding MGP_BALBcJ_T0042191.1 MGP_BALBcJ_G0022195.1 mouse_genomes_project 15 87203733 87209182 - MGP_BALBcJ_P0042191 Tymp protein_coding protein_coding MGP_BALBcJ_T0041444.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 73984443 74003854 + protein_coding processed_transcript MGP_BALBcJ_T0041445.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 73984450 74007712 + MGP_BALBcJ_P0041445 protein_coding unknown_likely_coding MGP_BALBcJ_T0041446.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74002225 74003401 + protein_coding processed_transcript MGP_BALBcJ_T0041447.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74003451 74007959 + protein_coding retained_intron MGP_BALBcJ_T0041448.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74003573 74007955 + MGP_BALBcJ_P0041448 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041449.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74004477 74006389 + protein_coding retained_intron MGP_BALBcJ_T0041450.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74004492 74006553 + MGP_BALBcJ_P0041450 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041451.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74004735 74005533 + protein_coding retained_intron MGP_BALBcJ_T0041452.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74005847 74007959 + protein_coding retained_intron MGP_BALBcJ_T0041453.1 MGP_BALBcJ_G0021973.1 mouse_genomes_project 15 74005956 74007959 + protein_coding retained_intron MGP_BALBcJ_T0042524.1 MGP_BALBcJ_G0022303.1 mouse_genomes_project 15 97704060 97704347 - MGP_BALBcJ_P0042524 Gm17349 protein_coding protein_coding MGP_BALBcJ_T0042247.1 MGP_BALBcJ_G0022211.1 mouse_genomes_project 15 88977762 89024244 - MGP_BALBcJ_P0042247 Abcd2 protein_coding protein_coding MGP_BALBcJ_T0041267.1 MGP_BALBcJ_G0021933.1 mouse_genomes_project 15 73227966 73233041 - MGP_BALBcJ_P0041267 Tsta3 protein_coding protein_coding MGP_BALBcJ_T0042197.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87250680 87265203 - Chkb protein_coding retained_intron MGP_BALBcJ_T0042202.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87261873 87265367 - Chkb protein_coding retained_intron MGP_BALBcJ_T0042203.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87261873 87262675 - Chkb protein_coding processed_transcript MGP_BALBcJ_T0042204.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87261880 87264946 - Chkb protein_coding retained_intron MGP_BALBcJ_T0042205.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87261880 87265406 - MGP_BALBcJ_P0042205 Chkb protein_coding protein_coding MGP_BALBcJ_T0042206.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87261954 87264007 - MGP_BALBcJ_P0042206 Chkb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042207.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87261981 87262673 - Chkb protein_coding retained_intron MGP_BALBcJ_T0042208.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87262628 87265415 - Chkb protein_coding retained_intron MGP_BALBcJ_T0042209.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87262893 87264937 - Chkb protein_coding retained_intron MGP_BALBcJ_T0042210.1 MGP_BALBcJ_G0022199.1 mouse_genomes_project 15 87263148 87264607 - MGP_BALBcJ_P0042210 Chkb protein_coding protein_coding MGP_BALBcJ_T0041591.1 MGP_BALBcJ_G0022024.1 mouse_genomes_project 15 76408424 76411994 + MGP_BALBcJ_P0041591 Lgals1 protein_coding protein_coding MGP_BALBcJ_T0040590.1 MGP_BALBcJ_G0021700.1 mouse_genomes_project 15 8808654 8823374 - MGP_BALBcJ_P0040590 Sub1 protein_coding protein_coding MGP_BALBcJ_T0040591.1 MGP_BALBcJ_G0021700.1 mouse_genomes_project 15 8811356 8824299 - MGP_BALBcJ_P0040591 Sub1 protein_coding protein_coding MGP_BALBcJ_T0040592.1 MGP_BALBcJ_G0021700.1 mouse_genomes_project 15 8813449 8823328 - Sub1 protein_coding retained_intron MGP_BALBcJ_T0040593.1 MGP_BALBcJ_G0021700.1 mouse_genomes_project 15 8813769 8823066 - Sub1 protein_coding processed_transcript MGP_BALBcJ_T0042464.1 MGP_BALBcJ_G0022287.1 mouse_genomes_project 15 97086110 97093593 + Dnajc22 protein_coding processed_transcript MGP_BALBcJ_T0042465.1 MGP_BALBcJ_G0022287.1 mouse_genomes_project 15 97092093 97096600 + MGP_BALBcJ_P0042465 Dnajc22 protein_coding protein_coding MGP_BALBcJ_T0041778.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78530064 78563838 + MGP_BALBcJ_P0041778 Sgsm3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041779.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78530084 78569612 + Sgsm3 protein_coding processed_transcript MGP_BALBcJ_T0041780.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78530088 78569404 + MGP_BALBcJ_P0041780 Sgsm3 protein_coding protein_coding MGP_BALBcJ_T0041781.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78530105 78560499 + Sgsm3 protein_coding processed_transcript MGP_BALBcJ_T0041782.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78530105 78563820 + MGP_BALBcJ_P0041782 Sgsm3 protein_coding protein_coding MGP_BALBcJ_T0041783.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78530122 78560499 + Sgsm3 protein_coding processed_transcript MGP_BALBcJ_T0041785.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78565260 78567273 + Sgsm3 protein_coding retained_intron MGP_BALBcJ_T0041786.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78565681 78567859 + MGP_BALBcJ_P0041786 Sgsm3 protein_coding protein_coding MGP_BALBcJ_T0041787.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78566572 78567622 + Sgsm3 protein_coding retained_intron MGP_BALBcJ_T0041788.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78567180 78569212 + Sgsm3 protein_coding retained_intron MGP_BALBcJ_T0041789.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78567957 78569079 + Sgsm3 protein_coding retained_intron MGP_BALBcJ_T0041790.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78568047 78569064 + Sgsm3 protein_coding retained_intron MGP_BALBcJ_T0041791.1 MGP_BALBcJ_G0022072.1 mouse_genomes_project 15 78568199 78568958 + Sgsm3 protein_coding retained_intron MGP_BALBcJ_T0041584.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76380971 76400769 + Sh3bp1 protein_coding processed_transcript MGP_BALBcJ_T0041585.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76381071 76393394 + MGP_BALBcJ_P0041585 Sh3bp1 protein_coding protein_coding MGP_BALBcJ_T0041586.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76381071 76393398 + MGP_BALBcJ_P0041586 Sh3bp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041587.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76381071 76393398 + MGP_BALBcJ_P0041587 Sh3bp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041588.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76381071 76393398 + MGP_BALBcJ_P0041588 Sh3bp1 protein_coding protein_coding MGP_BALBcJ_T0041589.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76381071 76393398 + MGP_BALBcJ_P0041589 Sh3bp1 protein_coding protein_coding MGP_BALBcJ_T0041590.1 MGP_BALBcJ_G0022023.1 mouse_genomes_project 15 76395279 76401254 + MGP_BALBcJ_P0041590 Sh3bp1 protein_coding protein_coding MGP_BALBcJ_T0003576.1 MGP_BALBcJ_G0003245.1 mouse_genomes_project 15 34353262 34354501 - Gm16136 antisense antisense MGP_BALBcJ_T0003577.1 MGP_BALBcJ_G0003245.1 mouse_genomes_project 15 34353280 34354651 - Gm16136 antisense antisense MGP_BALBcJ_T0003578.1 MGP_BALBcJ_G0003245.1 mouse_genomes_project 15 34353996 34354483 - Gm16136 antisense antisense MGP_BALBcJ_T0041680.1 MGP_BALBcJ_G0022042.1 mouse_genomes_project 15 77001372 77024334 - MGP_BALBcJ_P0041680 Kcnj4 protein_coding protein_coding MGP_BALBcJ_T0041002.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59115175 59121539 + MGP_BALBcJ_P0041002 Myc protein_coding protein_coding MGP_BALBcJ_T0041003.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59116009 59121537 + MGP_BALBcJ_P0041003 Myc protein_coding protein_coding MGP_BALBcJ_T0041004.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59116182 59121561 + MGP_BALBcJ_P0041004 Myc protein_coding protein_coding MGP_BALBcJ_T0041005.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59116240 59121254 + MGP_BALBcJ_P0041005 Myc protein_coding protein_coding MGP_BALBcJ_T0041006.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59116540 59121095 + MGP_BALBcJ_P0041006 Myc protein_coding protein_coding MGP_BALBcJ_T0041007.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59117652 59118230 + MGP_BALBcJ_P0041007 Myc protein_coding protein_coding MGP_BALBcJ_T0041008.1 MGP_BALBcJ_G0021856.1 mouse_genomes_project 15 59118034 59121440 + MGP_BALBcJ_P0041008 Myc protein_coding protein_coding MGP_BALBcJ_T0003572.1 MGP_BALBcJ_G0003241.1 mouse_genomes_project 15 924149 926748 - Gm15632 antisense antisense MGP_BALBcJ_T0042541.1 MGP_BALBcJ_G0022310.1 mouse_genomes_project 15 97975561 98022367 + MGP_BALBcJ_P0042541 Larp4 protein_coding protein_coding MGP_BALBcJ_T0042542.1 MGP_BALBcJ_G0022310.1 mouse_genomes_project 15 97978303 98022367 + MGP_BALBcJ_P0042542 Larp4 protein_coding protein_coding MGP_BALBcJ_T0042156.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87119328 87145829 - MGP_BALBcJ_P0042156 Sbf1 protein_coding protein_coding MGP_BALBcJ_T0042157.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87119375 87145773 - MGP_BALBcJ_P0042157 Sbf1 protein_coding protein_coding MGP_BALBcJ_T0042158.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87119378 87145789 - MGP_BALBcJ_P0042158 Sbf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042159.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87119379 87125282 - MGP_BALBcJ_P0042159 Sbf1 protein_coding protein_coding MGP_BALBcJ_T0042160.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87119648 87120051 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042161.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87120827 87124795 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042162.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87124985 87126636 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042163.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87130237 87130981 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042164.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87131075 87133151 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042165.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87132803 87133855 - MGP_BALBcJ_P0042165 Sbf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042166.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87133613 87135616 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042167.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87135408 87137138 - Sbf1 protein_coding retained_intron MGP_BALBcJ_T0042168.1 MGP_BALBcJ_G0022189.1 mouse_genomes_project 15 87136531 87138321 - MGP_BALBcJ_P0042168 Sbf1 protein_coding protein_coding MGP_BALBcJ_T0042719.1 MGP_BALBcJ_G0022377.1 mouse_genomes_project 15 100463045 100472745 - MGP_BALBcJ_P0042719 Sp7 protein_coding protein_coding MGP_BALBcJ_T0102248.1 MGP_BALBcJ_G0040064.1 mouse_genomes_project 15 72085561 72086411 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042145.1 MGP_BALBcJ_G0022184.1 mouse_genomes_project 15 86952349 86963984 - MGP_BALBcJ_P0042145 Mapk12 protein_coding protein_coding MGP_BALBcJ_T0042817.1 MGP_BALBcJ_G0022403.1 mouse_genomes_project 15 101402603 101428888 + MGP_BALBcJ_P0042817 Copz1 protein_coding protein_coding MGP_BALBcJ_T0011358.1 MGP_BALBcJ_G0009483.1 mouse_genomes_project 15 658819 659089 + Gm23228 misc_RNA misc_RNA MGP_BALBcJ_T0042708.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100437468 100443899 + MGP_BALBcJ_P0042708 Myg1 protein_coding protein_coding MGP_BALBcJ_T0042709.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100437479 100438356 + Myg1 protein_coding retained_intron MGP_BALBcJ_T0042710.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100437497 100443611 + Myg1 protein_coding retained_intron MGP_BALBcJ_T0042711.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100437509 100443594 + MGP_BALBcJ_P0042711 Myg1 protein_coding protein_coding MGP_BALBcJ_T0042712.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100437514 100443506 + MGP_BALBcJ_P0042712 Myg1 protein_coding protein_coding MGP_BALBcJ_T0042713.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100437676 100442955 + Myg1 protein_coding retained_intron MGP_BALBcJ_T0042714.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100438189 100442637 + Myg1 protein_coding processed_transcript MGP_BALBcJ_T0042715.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100439399 100442661 + Myg1 protein_coding retained_intron MGP_BALBcJ_T0042716.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100442530 100443611 + Myg1 protein_coding retained_intron MGP_BALBcJ_T0042717.1 MGP_BALBcJ_G0022375.1 mouse_genomes_project 15 100442792 100443550 + Myg1 protein_coding retained_intron MGP_BALBcJ_T0042170.1 MGP_BALBcJ_G0022191.1 mouse_genomes_project 15 87165551 87168169 + MGP_BALBcJ_P0042170 Miox protein_coding protein_coding MGP_BALBcJ_T0042171.1 MGP_BALBcJ_G0022191.1 mouse_genomes_project 15 87165614 87167278 + Miox protein_coding retained_intron MGP_BALBcJ_T0042172.1 MGP_BALBcJ_G0022191.1 mouse_genomes_project 15 87165793 87167789 + Miox protein_coding retained_intron MGP_BALBcJ_T0042173.1 MGP_BALBcJ_G0022191.1 mouse_genomes_project 15 87166083 87167566 + MGP_BALBcJ_P0042173 Miox protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042174.1 MGP_BALBcJ_G0022191.1 mouse_genomes_project 15 87166084 87167568 + Miox protein_coding retained_intron MGP_BALBcJ_T0042175.1 MGP_BALBcJ_G0022191.1 mouse_genomes_project 15 87167586 87168165 + MGP_BALBcJ_P0042175 Miox protein_coding protein_coding MGP_BALBcJ_T0040631.1 MGP_BALBcJ_G0021709.1 mouse_genomes_project 15 13754989 13840451 + MGP_BALBcJ_P0040631 Cdh9 protein_coding protein_coding MGP_BALBcJ_T0010080.1 MGP_BALBcJ_G0008205.1 mouse_genomes_project 15 99809585 99809714 + Gm44323 miRNA miRNA MGP_BALBcJ_T0042436.1 MGP_BALBcJ_G0022274.1 mouse_genomes_project 15 96718536 96744163 - MGP_BALBcJ_P0042436 Arf3 protein_coding protein_coding MGP_BALBcJ_T0042437.1 MGP_BALBcJ_G0022274.1 mouse_genomes_project 15 96721838 96744166 - Arf3 protein_coding processed_transcript MGP_BALBcJ_T0042438.1 MGP_BALBcJ_G0022274.1 mouse_genomes_project 15 96723374 96743944 - MGP_BALBcJ_P0042438 Arf3 protein_coding protein_coding MGP_BALBcJ_T0042573.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98622160 98649206 - MGP_BALBcJ_P0042573 Pou6f1 protein_coding protein_coding MGP_BALBcJ_T0042574.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98622160 98632358 - MGP_BALBcJ_P0042574 Pou6f1 protein_coding protein_coding MGP_BALBcJ_T0042575.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98622162 98640156 - MGP_BALBcJ_P0042575 Pou6f1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042576.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98622165 98627746 - Pou6f1 protein_coding retained_intron MGP_BALBcJ_T0042577.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98625076 98643264 - MGP_BALBcJ_P0042577 Pou6f1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042578.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98625076 98643264 - MGP_BALBcJ_P0042578 Pou6f1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042579.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98632924 98640259 - Pou6f1 protein_coding retained_intron MGP_BALBcJ_T0042580.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98633249 98649086 - Pou6f1 protein_coding processed_transcript MGP_BALBcJ_T0042581.1 MGP_BALBcJ_G0022321.1 mouse_genomes_project 15 98635259 98649086 - Pou6f1 protein_coding processed_transcript MGP_BALBcJ_T0006769.1 MGP_BALBcJ_G0005580.1 mouse_genomes_project 15 81118909 81129802 - 1700001L05Rik lincRNA lincRNA MGP_BALBcJ_T0006770.1 MGP_BALBcJ_G0005580.1 mouse_genomes_project 15 81118917 81129531 - 1700001L05Rik lincRNA lincRNA MGP_BALBcJ_T0006771.1 MGP_BALBcJ_G0005580.1 mouse_genomes_project 15 81118943 81129797 - 1700001L05Rik lincRNA lincRNA MGP_BALBcJ_T0006772.1 MGP_BALBcJ_G0005580.1 mouse_genomes_project 15 81120001 81127662 - 1700001L05Rik lincRNA lincRNA MGP_BALBcJ_T0041438.1 MGP_BALBcJ_G0021970.1 mouse_genomes_project 15 73956120 73973082 - MGP_BALBcJ_P0041438 Cyhr1 protein_coding protein_coding MGP_BALBcJ_T0041439.1 MGP_BALBcJ_G0021970.1 mouse_genomes_project 15 73959650 73969645 - MGP_BALBcJ_P0041439 Cyhr1 protein_coding protein_coding MGP_BALBcJ_T0041440.1 MGP_BALBcJ_G0021970.1 mouse_genomes_project 15 73970864 73973138 - MGP_BALBcJ_P0041440 Cyhr1 protein_coding protein_coding MGP_BALBcJ_T0041441.1 MGP_BALBcJ_G0021970.1 mouse_genomes_project 15 73970868 73973129 - MGP_BALBcJ_P0041441 Cyhr1 protein_coding protein_coding MGP_BALBcJ_T0013077.1 MGP_BALBcJ_G0011174.1 mouse_genomes_project 15 97555058 97555415 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099471.1 MGP_BALBcJ_G0037507.1 mouse_genomes_project 15 60613036 60613099 - Gm25702 snRNA snRNA MGP_BALBcJ_T0041379.1 MGP_BALBcJ_G0021956.1 mouse_genomes_project 15 73685639 73688145 + MGP_BALBcJ_P0041379 Hgh1 protein_coding protein_coding MGP_BALBcJ_T0042127.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86920046 86944703 - MGP_BALBcJ_P0042127 Tubgcp6 protein_coding protein_coding MGP_BALBcJ_T0042128.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86920787 86922788 - Tubgcp6 protein_coding retained_intron MGP_BALBcJ_T0042129.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86922099 86944502 - MGP_BALBcJ_P0042129 Tubgcp6 protein_coding protein_coding MGP_BALBcJ_T0042130.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86922099 86924293 - MGP_BALBcJ_P0042130 Tubgcp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042131.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86922123 86923233 - Tubgcp6 protein_coding retained_intron MGP_BALBcJ_T0042132.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86922382 86922969 - Tubgcp6 protein_coding retained_intron MGP_BALBcJ_T0042133.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86922406 86923704 - MGP_BALBcJ_P0042133 Tubgcp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042134.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86922701 86923870 - Tubgcp6 protein_coding retained_intron MGP_BALBcJ_T0042135.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86923165 86924062 - MGP_BALBcJ_P0042135 Tubgcp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042136.1 MGP_BALBcJ_G0022182.1 mouse_genomes_project 15 86925905 86929119 - MGP_BALBcJ_P0042136 Tubgcp6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0040812.1 MGP_BALBcJ_G0021774.1 mouse_genomes_project 15 35423329 35429653 - MGP_BALBcJ_P0040812 Klf10 protein_coding protein_coding MGP_BALBcJ_T0100763.1 MGP_BALBcJ_G0038799.1 mouse_genomes_project 15 70480554 70480677 + Gm24787 snoRNA snoRNA MGP_BALBcJ_T0100769.1 MGP_BALBcJ_G0038805.1 mouse_genomes_project 15 92893047 92893179 - Gm23129 snoRNA snoRNA MGP_BALBcJ_T0040972.1 MGP_BALBcJ_G0021836.1 mouse_genomes_project 15 55280435 55296981 + MGP_BALBcJ_P0040972 Wdyhv1 protein_coding protein_coding MGP_BALBcJ_T0042108.1 MGP_BALBcJ_G0022177.1 mouse_genomes_project 15 86783956 86804937 - MGP_BALBcJ_P0042108 Mlc1 protein_coding protein_coding MGP_BALBcJ_T0042109.1 MGP_BALBcJ_G0022177.1 mouse_genomes_project 15 86783956 86804937 - MGP_BALBcJ_P0042109 Mlc1 protein_coding protein_coding MGP_BALBcJ_T0041274.1 MGP_BALBcJ_G0021936.1 mouse_genomes_project 15 73282422 73285006 - MGP_BALBcJ_P0041274 Ccdc166 protein_coding protein_coding MGP_BALBcJ_T0041275.1 MGP_BALBcJ_G0021936.1 mouse_genomes_project 15 73283317 73284993 - MGP_BALBcJ_P0041275 Ccdc166 protein_coding protein_coding MGP_BALBcJ_T0040497.1 MGP_BALBcJ_G0021673.1 mouse_genomes_project 15 4992314 5113293 + MGP_BALBcJ_P0040497 2410089E03Rik protein_coding protein_coding MGP_BALBcJ_T0040498.1 MGP_BALBcJ_G0021673.1 mouse_genomes_project 15 4992652 5079891 + MGP_BALBcJ_P0040498 2410089E03Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0040499.1 MGP_BALBcJ_G0021673.1 mouse_genomes_project 15 5009162 5010017 + 2410089E03Rik protein_coding retained_intron MGP_BALBcJ_T0040500.1 MGP_BALBcJ_G0021673.1 mouse_genomes_project 15 5017460 5025967 + 2410089E03Rik protein_coding retained_intron MGP_BALBcJ_T0040501.1 MGP_BALBcJ_G0021673.1 mouse_genomes_project 15 5038958 5041621 + 2410089E03Rik protein_coding retained_intron MGP_BALBcJ_T0040502.1 MGP_BALBcJ_G0021673.1 mouse_genomes_project 15 5090379 5096257 + 2410089E03Rik protein_coding retained_intron MGP_BALBcJ_T0042506.1 MGP_BALBcJ_G0022299.1 mouse_genomes_project 15 97589609 97593368 + MGP_BALBcJ_P0042506 Aqp5 protein_coding protein_coding MGP_BALBcJ_T0042507.1 MGP_BALBcJ_G0022299.1 mouse_genomes_project 15 97589788 97593589 + MGP_BALBcJ_P0042507 Aqp5 protein_coding protein_coding MGP_BALBcJ_T0041427.1 MGP_BALBcJ_G0021967.1 mouse_genomes_project 15 73907416 73919793 - MGP_BALBcJ_P0041427 Cpsf1 protein_coding protein_coding MGP_BALBcJ_T0042146.1 MGP_BALBcJ_G0022185.1 mouse_genomes_project 15 86965766 86974463 - MGP_BALBcJ_P0042146 Mapk11 protein_coding protein_coding MGP_BALBcJ_T0042110.1 MGP_BALBcJ_G0022178.1 mouse_genomes_project 15 86808838 86820933 + Mov10l1 protein_coding retained_intron MGP_BALBcJ_T0042111.1 MGP_BALBcJ_G0022178.1 mouse_genomes_project 15 86808838 86874867 + MGP_BALBcJ_P0042111 Mov10l1 protein_coding protein_coding MGP_BALBcJ_T0042112.1 MGP_BALBcJ_G0022178.1 mouse_genomes_project 15 86808923 86874871 + MGP_BALBcJ_P0042112 Mov10l1 protein_coding protein_coding MGP_BALBcJ_T0042113.1 MGP_BALBcJ_G0022178.1 mouse_genomes_project 15 86846720 86849921 + Mov10l1 protein_coding processed_transcript MGP_BALBcJ_T0042114.1 MGP_BALBcJ_G0022178.1 mouse_genomes_project 15 86849912 86874867 + MGP_BALBcJ_P0042114 Mov10l1 protein_coding protein_coding MGP_BALBcJ_T0042636.1 MGP_BALBcJ_G0022333.1 mouse_genomes_project 15 99289640 99298026 + MGP_BALBcJ_P0042636 Grasp protein_coding protein_coding MGP_BALBcJ_T0041244.1 MGP_BALBcJ_G0021927.1 mouse_genomes_project 15 73159765 73164867 + MGP_BALBcJ_P0041244 Gsdmd protein_coding protein_coding MGP_BALBcJ_T0042395.1 MGP_BALBcJ_G0022259.1 mouse_genomes_project 15 96348218 96349320 - MGP_BALBcJ_P0042395 Olfr283 protein_coding protein_coding MGP_BALBcJ_T0040981.1 MGP_BALBcJ_G0021842.1 mouse_genomes_project 15 55937519 55978866 - MGP_BALBcJ_P0040981 Tmem65 protein_coding protein_coding MGP_BALBcJ_T0010011.1 MGP_BALBcJ_G0008136.1 mouse_genomes_project 15 19002724 19002893 - Gm44373 miRNA miRNA MGP_BALBcJ_T0040902.1 MGP_BALBcJ_G0021812.1 mouse_genomes_project 15 51043821 51045513 + MGP_BALBcJ_P0040902 Gm7489 protein_coding protein_coding MGP_BALBcJ_T0010074.1 MGP_BALBcJ_G0008199.1 mouse_genomes_project 15 99256735 99256798 + Mir6962 miRNA miRNA MGP_BALBcJ_T0041402.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73819658 73829567 - MGP_BALBcJ_P0041402 Dgat1 protein_coding protein_coding MGP_BALBcJ_T0041403.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73819660 73820824 - Dgat1 protein_coding retained_intron MGP_BALBcJ_T0041404.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73819711 73820958 - Dgat1 protein_coding retained_intron MGP_BALBcJ_T0041405.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73820167 73821589 - MGP_BALBcJ_P0041405 Dgat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041406.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73820919 73824249 - MGP_BALBcJ_P0041406 Dgat1 protein_coding protein_coding MGP_BALBcJ_T0041407.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73821234 73821966 - Dgat1 protein_coding retained_intron MGP_BALBcJ_T0041408.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73821545 73822839 - Dgat1 protein_coding retained_intron MGP_BALBcJ_T0041409.1 MGP_BALBcJ_G0021962.1 mouse_genomes_project 15 73821595 73822307 - Dgat1 protein_coding retained_intron MGP_BALBcJ_T0040477.1 MGP_BALBcJ_G0021666.1 mouse_genomes_project 15 3528625 3631692 + MGP_BALBcJ_P0040477 Rictor protein_coding protein_coding MGP_BALBcJ_T0042392.1 MGP_BALBcJ_G0022257.1 mouse_genomes_project 15 96283743 96284703 - MGP_BALBcJ_P0042392 Olfr285 protein_coding protein_coding MGP_BALBcJ_T0041443.1 MGP_BALBcJ_G0021972.1 mouse_genomes_project 15 73981080 73982745 - MGP_BALBcJ_P0041443 Foxh1 protein_coding protein_coding MGP_BALBcJ_T0017432.1 MGP_BALBcJ_G0015242.1 mouse_genomes_project 15 76821810 76823178 + Gm20420 processed_transcript processed_transcript MGP_BALBcJ_T0040982.1 MGP_BALBcJ_G0021843.1 mouse_genomes_project 15 56000102 56000868 - MGP_BALBcJ_P0040982 Ube2d4 protein_coding protein_coding MGP_BALBcJ_T0040665.1 MGP_BALBcJ_G0021720.1 mouse_genomes_project 15 23374514 23377838 + March11 protein_coding retained_intron MGP_BALBcJ_T0040666.1 MGP_BALBcJ_G0021720.1 mouse_genomes_project 15 23374728 23474877 + MGP_BALBcJ_P0040666 March11 protein_coding protein_coding MGP_BALBcJ_T0040667.1 MGP_BALBcJ_G0021720.1 mouse_genomes_project 15 23453451 23475034 + March11 protein_coding retained_intron MGP_BALBcJ_T0099467.1 MGP_BALBcJ_G0037503.1 mouse_genomes_project 15 52412309 52412371 - Gm26296 snRNA snRNA MGP_BALBcJ_T0042647.1 MGP_BALBcJ_G0022339.1 mouse_genomes_project 15 99520697 99526856 + MGP_BALBcJ_P0042647 Krt88 protein_coding protein_coding MGP_BALBcJ_T0042582.1 MGP_BALBcJ_G0022322.1 mouse_genomes_project 15 98664657 98669762 + MGP_BALBcJ_P0042582 Dazap2 protein_coding protein_coding MGP_BALBcJ_T0100738.1 MGP_BALBcJ_G0038774.1 mouse_genomes_project 15 27067372 27067450 - Gm23327 snoRNA snoRNA MGP_BALBcJ_T0041861.1 MGP_BALBcJ_G0022091.1 mouse_genomes_project 15 79475747 79518583 + MGP_BALBcJ_P0041861 Aco2 protein_coding protein_coding MGP_BALBcJ_T0041862.1 MGP_BALBcJ_G0022091.1 mouse_genomes_project 15 79475922 79492907 + Aco2 protein_coding retained_intron MGP_BALBcJ_T0041863.1 MGP_BALBcJ_G0022091.1 mouse_genomes_project 15 79475922 79492908 + Aco2 protein_coding processed_transcript MGP_BALBcJ_T0041864.1 MGP_BALBcJ_G0022091.1 mouse_genomes_project 15 79510503 79513961 + Aco2 protein_coding retained_intron MGP_BALBcJ_T0041865.1 MGP_BALBcJ_G0022091.1 mouse_genomes_project 15 79510783 79513615 + Aco2 protein_coding retained_intron MGP_BALBcJ_T0041866.1 MGP_BALBcJ_G0022091.1 mouse_genomes_project 15 79513740 79516743 + Aco2 protein_coding retained_intron MGP_BALBcJ_T0040744.1 MGP_BALBcJ_G0021753.1 mouse_genomes_project 15 32365310 32372511 + MGP_BALBcJ_P0040744 Osr2 protein_coding protein_coding MGP_BALBcJ_T0040759.1 MGP_BALBcJ_G0021759.1 mouse_genomes_project 15 33268060 33325650 + MGP_BALBcJ_P0040759 Spag1 protein_coding unknown_likely_coding MGP_BALBcJ_T0040496.1 MGP_BALBcJ_G0021672.1 mouse_genomes_project 15 4932663 4983337 + MGP_BALBcJ_P0040496 Nup155 protein_coding protein_coding MGP_BALBcJ_T0042718.1 MGP_BALBcJ_G0022376.1 mouse_genomes_project 15 100444006 100456608 - MGP_BALBcJ_P0042718 Aaas protein_coding protein_coding MGP_BALBcJ_T0040821.1 MGP_BALBcJ_G0021778.1 mouse_genomes_project 15 36010904 36042714 + MGP_BALBcJ_P0040821 Fzd6 protein_coding protein_coding MGP_BALBcJ_T0040822.1 MGP_BALBcJ_G0021778.1 mouse_genomes_project 15 36010957 36042714 + MGP_BALBcJ_P0040822 Fzd6 protein_coding protein_coding MGP_BALBcJ_T0099456.1 MGP_BALBcJ_G0037492.1 mouse_genomes_project 15 33257388 33257547 + Gm22979 snRNA snRNA MGP_BALBcJ_T0041178.1 MGP_BALBcJ_G0021907.1 mouse_genomes_project 15 71957414 71974429 + MGP_BALBcJ_P0041178 protein_coding protein_coding MGP_BALBcJ_T0041179.1 MGP_BALBcJ_G0021907.1 mouse_genomes_project 15 71957430 71968687 + MGP_BALBcJ_P0041179 protein_coding protein_coding MGP_BALBcJ_T0041180.1 MGP_BALBcJ_G0021907.1 mouse_genomes_project 15 71959953 71968687 + protein_coding processed_transcript MGP_BALBcJ_T0041181.1 MGP_BALBcJ_G0021907.1 mouse_genomes_project 15 71959953 71968687 + protein_coding processed_transcript MGP_BALBcJ_T0100728.1 MGP_BALBcJ_G0038764.1 mouse_genomes_project 15 1958234 1958315 + Snord72 snoRNA snoRNA MGP_BALBcJ_T0011366.1 MGP_BALBcJ_G0009491.1 mouse_genomes_project 15 59171356 59171529 + Gm27913 misc_RNA misc_RNA MGP_BALBcJ_T0098518.1 MGP_BALBcJ_G0036572.1 mouse_genomes_project 15 77236586 77236710 + n-R5s40 rRNA rRNA MGP_BALBcJ_T0041080.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64125041 64165422 - MGP_BALBcJ_P0041080 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0041081.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64126586 64130190 - Ndrg1 protein_coding retained_intron MGP_BALBcJ_T0041082.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64126797 64165421 - MGP_BALBcJ_P0041082 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0041083.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64129878 64165421 - Ndrg1 protein_coding retained_intron MGP_BALBcJ_T0041084.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64137732 64165421 - MGP_BALBcJ_P0041084 Ndrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041085.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138794 64165421 - MGP_BALBcJ_P0041085 Ndrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041086.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138799 64163706 - MGP_BALBcJ_P0041086 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0041087.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138799 64144199 - MGP_BALBcJ_P0041087 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0041088.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138812 64165398 - MGP_BALBcJ_P0041088 Ndrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041089.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138817 64165377 - MGP_BALBcJ_P0041089 Ndrg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041090.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138849 64165398 - MGP_BALBcJ_P0041090 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0041091.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64138856 64163721 - MGP_BALBcJ_P0041091 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0041092.1 MGP_BALBcJ_G0021876.1 mouse_genomes_project 15 64142255 64165422 - MGP_BALBcJ_P0041092 Ndrg1 protein_coding protein_coding MGP_BALBcJ_T0010072.1 MGP_BALBcJ_G0008197.1 mouse_genomes_project 15 97073758 97073819 + Mir6960 miRNA miRNA MGP_BALBcJ_T0099474.1 MGP_BALBcJ_G0037510.1 mouse_genomes_project 15 65828215 65828322 + Gm25987 snRNA snRNA MGP_BALBcJ_T0101858.1 MGP_BALBcJ_G0039773.1 mouse_genomes_project 15 61087937 61132298 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101859.1 MGP_BALBcJ_G0039773.1 mouse_genomes_project 15 61088649 61145496 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0041381.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73696888 73756416 + Mroh1 protein_coding processed_transcript MGP_BALBcJ_T0041382.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73697140 73726181 + Mroh1 protein_coding processed_transcript MGP_BALBcJ_T0041383.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73697140 73769743 + MGP_BALBcJ_P0041383 Mroh1 protein_coding protein_coding MGP_BALBcJ_T0041384.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73697150 73769740 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0041385.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73697159 73718765 + MGP_BALBcJ_P0041385 Mroh1 protein_coding protein_coding MGP_BALBcJ_T0041386.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73697180 73726180 + MGP_BALBcJ_P0041386 Mroh1 protein_coding protein_coding MGP_BALBcJ_T0041387.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73706631 73769750 + MGP_BALBcJ_P0041387 Mroh1 protein_coding protein_coding MGP_BALBcJ_T0041388.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73706631 73756416 + MGP_BALBcJ_P0041388 Mroh1 protein_coding protein_coding MGP_BALBcJ_T0041389.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73744571 73769743 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0041390.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73745328 73750581 + MGP_BALBcJ_P0041390 Mroh1 protein_coding protein_coding MGP_BALBcJ_T0041391.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73757705 73763496 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0041392.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73766368 73767925 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0041393.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73767332 73768090 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0041394.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73768518 73769089 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0041395.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73768566 73769743 + MGP_BALBcJ_P0041395 Mroh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041396.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73768843 73769743 + MGP_BALBcJ_P0041396 Mroh1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0041397.1 MGP_BALBcJ_G0021958.1 mouse_genomes_project 15 73768858 73769742 + Mroh1 protein_coding retained_intron MGP_BALBcJ_T0013078.1 MGP_BALBcJ_G0011175.1 mouse_genomes_project 15 97813068 97813353 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042226.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87423996 87433378 - MGP_BALBcJ_P0042226 Rabl2 protein_coding protein_coding MGP_BALBcJ_T0042227.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424000 87433320 - Rabl2 protein_coding retained_intron MGP_BALBcJ_T0042228.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424000 87433319 - MGP_BALBcJ_P0042228 Rabl2 protein_coding protein_coding MGP_BALBcJ_T0042229.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424504 87431861 - MGP_BALBcJ_P0042229 Rabl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042230.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424776 87426006 - Rabl2 protein_coding retained_intron MGP_BALBcJ_T0042231.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424818 87433345 - MGP_BALBcJ_P0042231 Rabl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042232.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424846 87433294 - MGP_BALBcJ_P0042232 Rabl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042233.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87424861 87425781 - MGP_BALBcJ_P0042233 Rabl2 protein_coding protein_coding MGP_BALBcJ_T0042234.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87425107 87433341 - MGP_BALBcJ_P0042234 Rabl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042235.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87427695 87433360 - Rabl2 protein_coding retained_intron MGP_BALBcJ_T0042236.1 MGP_BALBcJ_G0022206.1 mouse_genomes_project 15 87429354 87433331 - Rabl2 protein_coding processed_transcript MGP_BALBcJ_T0042269.1 MGP_BALBcJ_G0022217.1 mouse_genomes_project 15 90260961 90639088 + MGP_BALBcJ_P0042269 Pdzrn4 protein_coding protein_coding MGP_BALBcJ_T0042270.1 MGP_BALBcJ_G0022217.1 mouse_genomes_project 15 90467735 90639088 + MGP_BALBcJ_P0042270 Pdzrn4 protein_coding protein_coding MGP_BALBcJ_T0011367.1 MGP_BALBcJ_G0009492.1 mouse_genomes_project 15 59215013 59215212 + Gm27782 misc_RNA misc_RNA MGP_BALBcJ_T0000931.1 MGP_BALBcJ_G0000862.1 mouse_genomes_project 15 22313921 22314436 - TEC TEC MGP_BALBcJ_T0003584.1 MGP_BALBcJ_G0003251.1 mouse_genomes_project 15 63257380 63275383 + Gm27153 antisense antisense MGP_BALBcJ_T0042703.1 MGP_BALBcJ_G0022374.1 mouse_genomes_project 15 100431970 100437168 + Pfdn5 protein_coding retained_intron MGP_BALBcJ_T0042704.1 MGP_BALBcJ_G0022374.1 mouse_genomes_project 15 100431991 100437109 + MGP_BALBcJ_P0042704 Pfdn5 protein_coding protein_coding MGP_BALBcJ_T0042705.1 MGP_BALBcJ_G0022374.1 mouse_genomes_project 15 100431991 100437246 + MGP_BALBcJ_P0042705 Pfdn5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042706.1 MGP_BALBcJ_G0022374.1 mouse_genomes_project 15 100431991 100437255 + MGP_BALBcJ_P0042706 Pfdn5 protein_coding protein_coding MGP_BALBcJ_T0042707.1 MGP_BALBcJ_G0022374.1 mouse_genomes_project 15 100432193 100437222 + MGP_BALBcJ_P0042707 Pfdn5 protein_coding protein_coding MGP_BALBcJ_T0041803.1 MGP_BALBcJ_G0022076.1 mouse_genomes_project 15 78892309 78937502 - MGP_BALBcJ_P0041803 Slc25a17 protein_coding unknown_likely_coding MGP_BALBcJ_T0041804.1 MGP_BALBcJ_G0022076.1 mouse_genomes_project 15 78892315 78937537 - MGP_BALBcJ_P0041804 Slc25a17 protein_coding protein_coding MGP_BALBcJ_T0042389.1 MGP_BALBcJ_G0022255.1 mouse_genomes_project 15 96225423 96226749 - MGP_BALBcJ_P0042389 H1fnt protein_coding protein_coding MGP_BALBcJ_T0042539.1 MGP_BALBcJ_G0022309.1 mouse_genomes_project 15 97923255 97937385 - MGP_BALBcJ_P0042539 protein_coding protein_coding MGP_BALBcJ_T0042540.1 MGP_BALBcJ_G0022309.1 mouse_genomes_project 15 97923260 97972563 - MGP_BALBcJ_P0042540 protein_coding protein_coding MGP_BALBcJ_T0000933.1 MGP_BALBcJ_G0000864.1 mouse_genomes_project 15 60637915 60649688 + TEC TEC MGP_BALBcJ_T0042385.1 MGP_BALBcJ_G0022252.1 mouse_genomes_project 15 96135629 96137958 + MGP_BALBcJ_P0042385 Ccdc184 protein_coding protein_coding MGP_BALBcJ_T0042190.1 MGP_BALBcJ_G0022194.1 mouse_genomes_project 15 87203441 87205619 - MGP_BALBcJ_P0042190 Sco2 protein_coding protein_coding MGP_BALBcJ_T0098843.1 MGP_BALBcJ_G0036893.1 mouse_genomes_project 15 34888369 34890939 - Gm15940 sense_intronic sense_intronic MGP_BALBcJ_T0042635.1 MGP_BALBcJ_G0022332.1 mouse_genomes_project 15 99256657 99278385 + MGP_BALBcJ_P0042635 Acvr1b protein_coding protein_coding MGP_BALBcJ_T0041739.1 MGP_BALBcJ_G0022058.1 mouse_genomes_project 15 77530066 77548995 - MGP_BALBcJ_P0041739 Pdgfb protein_coding protein_coding MGP_BALBcJ_T0041412.1 MGP_BALBcJ_G0021964.1 mouse_genomes_project 15 73854334 73857351 - MGP_BALBcJ_P0041412 Fbxl6 protein_coding protein_coding MGP_BALBcJ_T0042656.1 MGP_BALBcJ_G0022347.1 mouse_genomes_project 15 99719115 99725162 - MGP_BALBcJ_P0042656 Gm5414 protein_coding protein_coding MGP_BALBcJ_T0041903.1 MGP_BALBcJ_G0022102.1 mouse_genomes_project 15 79824225 79830068 - MGP_BALBcJ_P0041903 Shisa8 protein_coding protein_coding MGP_BALBcJ_T0042195.1 MGP_BALBcJ_G0022198.1 mouse_genomes_project 15 87223000 87244287 - MGP_BALBcJ_P0042195 Syce3 protein_coding protein_coding MGP_BALBcJ_T0042196.1 MGP_BALBcJ_G0022198.1 mouse_genomes_project 15 87223000 87244527 - MGP_BALBcJ_P0042196 Syce3 protein_coding protein_coding MGP_BALBcJ_T0010049.1 MGP_BALBcJ_G0008174.1 mouse_genomes_project 15 80016429 80016489 - Gm27622 miRNA miRNA MGP_BALBcJ_T0003592.1 MGP_BALBcJ_G0003258.1 mouse_genomes_project 15 72955420 72957543 + Gm15945 antisense antisense MGP_BALBcJ_T0042536.1 MGP_BALBcJ_G0022308.1 mouse_genomes_project 15 97779870 97847149 - MGP_BALBcJ_P0042536 Lima1 protein_coding protein_coding MGP_BALBcJ_T0042537.1 MGP_BALBcJ_G0022308.1 mouse_genomes_project 15 97782647 97785474 - Lima1 protein_coding retained_intron MGP_BALBcJ_T0042538.1 MGP_BALBcJ_G0022308.1 mouse_genomes_project 15 97844626 97879345 - Lima1 protein_coding retained_intron MGP_BALBcJ_T0041326.1 MGP_BALBcJ_G0021946.1 mouse_genomes_project 15 73560748 73563846 + MGP_BALBcJ_P0041326 Grina protein_coding protein_coding MGP_BALBcJ_T0042674.1 MGP_BALBcJ_G0022364.1 mouse_genomes_project 15 100205839 100219253 + MGP_BALBcJ_P0042674 Tns2 protein_coding protein_coding MGP_BALBcJ_T0042675.1 MGP_BALBcJ_G0022364.1 mouse_genomes_project 15 100205839 100219243 + MGP_BALBcJ_P0042675 Tns2 protein_coding protein_coding MGP_BALBcJ_T0041818.1 MGP_BALBcJ_G0022081.1 mouse_genomes_project 15 79084114 79084538 - MGP_BALBcJ_P0041818 Gm5218 protein_coding protein_coding MGP_BALBcJ_T0042420.1 MGP_BALBcJ_G0022267.1 mouse_genomes_project 15 96547680 96566846 + MGP_BALBcJ_P0042420 4930415O20Rik protein_coding protein_coding MGP_BALBcJ_T0042791.1 MGP_BALBcJ_G0022395.1 mouse_genomes_project 15 101103095 101108323 + MGP_BALBcJ_P0042791 Hoxc9 protein_coding protein_coding MGP_BALBcJ_T0042792.1 MGP_BALBcJ_G0022395.1 mouse_genomes_project 15 101103688 101111665 + MGP_BALBcJ_P0042792 Hoxc9 protein_coding protein_coding MGP_BALBcJ_T0098850.1 MGP_BALBcJ_G0036899.1 mouse_genomes_project 16 22838912 22847748 - AU015336 sense_intronic sense_intronic MGP_BALBcJ_T0006828.1 MGP_BALBcJ_G0005627.1 mouse_genomes_project 16 35266771 35268282 + D930030I03Rik lincRNA lincRNA MGP_BALBcJ_T0043929.1 MGP_BALBcJ_G0022674.1 mouse_genomes_project 16 26728696 26732507 - MGP_BALBcJ_P0043929 Gm1968 protein_coding protein_coding MGP_BALBcJ_T0003638.1 MGP_BALBcJ_G0003294.1 mouse_genomes_project 16 13704318 13705127 + Gm15646 antisense antisense MGP_BALBcJ_T0003670.1 MGP_BALBcJ_G0003319.1 mouse_genomes_project 16 52800427 52801777 - Zbtb11os1 antisense antisense MGP_BALBcJ_T0010149.1 MGP_BALBcJ_G0008274.1 mouse_genomes_project 16 95192809 95192868 - Mir6964 miRNA miRNA MGP_BALBcJ_T0043178.1 MGP_BALBcJ_G0022500.1 mouse_genomes_project 16 10281888 10297429 - MGP_BALBcJ_P0043178 Pla2g10 protein_coding protein_coding MGP_BALBcJ_T0043179.1 MGP_BALBcJ_G0022500.1 mouse_genomes_project 16 10281890 10297969 - MGP_BALBcJ_P0043179 Pla2g10 protein_coding protein_coding MGP_BALBcJ_T0043180.1 MGP_BALBcJ_G0022500.1 mouse_genomes_project 16 10282225 10297705 - Pla2g10 protein_coding processed_transcript MGP_BALBcJ_T0043181.1 MGP_BALBcJ_G0022500.1 mouse_genomes_project 16 10292132 10297665 - Pla2g10 protein_coding processed_transcript MGP_BALBcJ_T0045022.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88146053 88221169 - MGP_BALBcJ_P0045022 Synj1 protein_coding protein_coding MGP_BALBcJ_T0045023.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88146054 88221287 - MGP_BALBcJ_P0045023 Synj1 protein_coding protein_coding MGP_BALBcJ_T0045024.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88146068 88160218 - MGP_BALBcJ_P0045024 Synj1 protein_coding protein_coding MGP_BALBcJ_T0045025.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88148619 88156454 - Synj1 protein_coding processed_transcript MGP_BALBcJ_T0045026.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88148765 88154670 - MGP_BALBcJ_P0045026 Synj1 protein_coding protein_coding MGP_BALBcJ_T0045027.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88154274 88160223 - MGP_BALBcJ_P0045027 Synj1 protein_coding protein_coding MGP_BALBcJ_T0045028.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88170290 88221040 - Synj1 protein_coding retained_intron MGP_BALBcJ_T0045029.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88174531 88221039 - MGP_BALBcJ_P0045029 Synj1 protein_coding protein_coding MGP_BALBcJ_T0045030.1 MGP_BALBcJ_G0023002.1 mouse_genomes_project 16 88219292 88221042 - Synj1 protein_coding retained_intron MGP_BALBcJ_T0000967.1 MGP_BALBcJ_G0000896.1 mouse_genomes_project 16 74741430 74744495 + TEC TEC MGP_BALBcJ_T0006824.1 MGP_BALBcJ_G0005623.1 mouse_genomes_project 16 26971992 26976967 - Gm26562 lincRNA lincRNA MGP_BALBcJ_T0003626.1 MGP_BALBcJ_G0003284.1 mouse_genomes_project 16 377002 378580 - Gm15537 antisense antisense MGP_BALBcJ_T0003682.1 MGP_BALBcJ_G0003328.1 mouse_genomes_project 16 93441972 93444085 - Gm15317 antisense antisense MGP_BALBcJ_T0044297.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33891793 34178529 - MGP_BALBcJ_P0044297 Stxbp5l protein_coding unknown_likely_coding MGP_BALBcJ_T0044298.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33894936 34178536 - MGP_BALBcJ_P0044298 Stxbp5l protein_coding protein_coding MGP_BALBcJ_T0044299.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33895262 34178536 - MGP_BALBcJ_P0044299 Stxbp5l protein_coding protein_coding MGP_BALBcJ_T0044300.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33895650 34178575 - MGP_BALBcJ_P0044300 Stxbp5l protein_coding protein_coding MGP_BALBcJ_T0044301.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33895650 34178571 - MGP_BALBcJ_P0044301 Stxbp5l protein_coding protein_coding MGP_BALBcJ_T0044302.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33913218 34178536 - MGP_BALBcJ_P0044302 Stxbp5l protein_coding protein_coding MGP_BALBcJ_T0044303.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33936414 33984118 - Stxbp5l protein_coding processed_transcript MGP_BALBcJ_T0044304.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 33993411 34178536 - MGP_BALBcJ_P0044304 Stxbp5l protein_coding protein_coding MGP_BALBcJ_T0044305.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 34113757 34178536 - Stxbp5l protein_coding retained_intron MGP_BALBcJ_T0044306.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 34167434 34178571 - Stxbp5l protein_coding processed_transcript MGP_BALBcJ_T0044307.1 MGP_BALBcJ_G0022765.1 mouse_genomes_project 16 34176483 34178536 - Stxbp5l protein_coding retained_intron MGP_BALBcJ_T0045153.1 MGP_BALBcJ_G0023028.1 mouse_genomes_project 16 89720341 89763355 + MGP_BALBcJ_P0045153 Clic6 protein_coding protein_coding MGP_BALBcJ_T0045154.1 MGP_BALBcJ_G0023028.1 mouse_genomes_project 16 89732738 89776104 + MGP_BALBcJ_P0045154 Clic6 protein_coding protein_coding MGP_BALBcJ_T0044836.1 MGP_BALBcJ_G0022923.1 mouse_genomes_project 16 72679293 72689564 + MGP_BALBcJ_P0044836 Rbm11 protein_coding protein_coding MGP_BALBcJ_T0044837.1 MGP_BALBcJ_G0022923.1 mouse_genomes_project 16 72679293 72688430 + MGP_BALBcJ_P0044837 Rbm11 protein_coding protein_coding MGP_BALBcJ_T0044838.1 MGP_BALBcJ_G0022923.1 mouse_genomes_project 16 72679340 72689560 + MGP_BALBcJ_P0044838 Rbm11 protein_coding protein_coding MGP_BALBcJ_T0044780.1 MGP_BALBcJ_G0022904.1 mouse_genomes_project 16 59697245 59752005 - MGP_BALBcJ_P0044780 Nsun3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044781.1 MGP_BALBcJ_G0022904.1 mouse_genomes_project 16 59697245 59752005 - MGP_BALBcJ_P0044781 Nsun3 protein_coding protein_coding MGP_BALBcJ_T0044782.1 MGP_BALBcJ_G0022904.1 mouse_genomes_project 16 59699961 59732351 - Nsun3 protein_coding processed_transcript MGP_BALBcJ_T0044783.1 MGP_BALBcJ_G0022904.1 mouse_genomes_project 16 59735919 59751994 - MGP_BALBcJ_P0044783 Nsun3 protein_coding protein_coding MGP_BALBcJ_T0044784.1 MGP_BALBcJ_G0022904.1 mouse_genomes_project 16 59741393 59752046 - Nsun3 protein_coding processed_transcript MGP_BALBcJ_T0044785.1 MGP_BALBcJ_G0022904.1 mouse_genomes_project 16 59744478 59751941 - Nsun3 protein_coding processed_transcript MGP_BALBcJ_T0044050.1 MGP_BALBcJ_G0022707.1 mouse_genomes_project 16 29256457 29269850 - MGP_BALBcJ_P0044050 Slc51a protein_coding protein_coding MGP_BALBcJ_T0044571.1 MGP_BALBcJ_G0022829.1 mouse_genomes_project 16 44894550 44895413 + MGP_BALBcJ_P0044571 Gm7275 protein_coding protein_coding MGP_BALBcJ_T0044275.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33659485 33671966 + Golgb1 protein_coding processed_transcript MGP_BALBcJ_T0044276.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33659486 33673767 + MGP_BALBcJ_P0044276 Golgb1 protein_coding protein_coding MGP_BALBcJ_T0044277.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33659486 33659984 + MGP_BALBcJ_P0044277 Golgb1 protein_coding protein_coding MGP_BALBcJ_T0044278.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33659513 33717466 + MGP_BALBcJ_P0044278 Golgb1 protein_coding protein_coding MGP_BALBcJ_T0044279.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33659547 33673769 + MGP_BALBcJ_P0044279 Golgb1 protein_coding protein_coding MGP_BALBcJ_T0044280.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33670501 33717466 + MGP_BALBcJ_P0044280 Golgb1 protein_coding protein_coding MGP_BALBcJ_T0044281.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33708837 33712752 + Golgb1 protein_coding retained_intron MGP_BALBcJ_T0044282.1 MGP_BALBcJ_G0022761.1 mouse_genomes_project 16 33715780 33716454 + Golgb1 protein_coding retained_intron MGP_BALBcJ_T0043455.1 MGP_BALBcJ_G0022553.1 mouse_genomes_project 16 14239706 14311348 - MGP_BALBcJ_P0043455 Med15 protein_coding protein_coding MGP_BALBcJ_T0043456.1 MGP_BALBcJ_G0022553.1 mouse_genomes_project 16 14239706 14311348 - MGP_BALBcJ_P0043456 Med15 protein_coding protein_coding MGP_BALBcJ_T0043002.1 MGP_BALBcJ_G0022455.1 mouse_genomes_project 16 1720859 1732136 + MGP_BALBcJ_P0043002 Alg1 protein_coding protein_coding MGP_BALBcJ_T0043003.1 MGP_BALBcJ_G0022455.1 mouse_genomes_project 16 1720876 1726971 + Alg1 protein_coding retained_intron MGP_BALBcJ_T0043004.1 MGP_BALBcJ_G0022455.1 mouse_genomes_project 16 1720876 1732145 + MGP_BALBcJ_P0043004 Alg1 protein_coding protein_coding MGP_BALBcJ_T0043005.1 MGP_BALBcJ_G0022455.1 mouse_genomes_project 16 1722408 1727751 + Alg1 protein_coding processed_transcript MGP_BALBcJ_T0043006.1 MGP_BALBcJ_G0022455.1 mouse_genomes_project 16 1727306 1730957 + Alg1 protein_coding retained_intron MGP_BALBcJ_T0042845.1 MGP_BALBcJ_G0022417.1 mouse_genomes_project 16 296277 307724 + MGP_BALBcJ_P0042845 Zfp174 protein_coding protein_coding MGP_BALBcJ_T0043169.1 MGP_BALBcJ_G0022497.1 mouse_genomes_project 16 10095043 10230956 - MGP_BALBcJ_P0043169 Parn protein_coding protein_coding MGP_BALBcJ_T0043752.1 MGP_BALBcJ_G0022620.1 mouse_genomes_project 16 17350985 17355380 + MGP_BALBcJ_P0043752 Polr2h protein_coding protein_coding MGP_BALBcJ_T0043753.1 MGP_BALBcJ_G0022620.1 mouse_genomes_project 16 17351492 17355120 + Polr2h protein_coding processed_transcript MGP_BALBcJ_T0043777.1 MGP_BALBcJ_G0022626.1 mouse_genomes_project 16 18363699 18410388 - MGP_BALBcJ_P0043777 2510009E07Rik protein_coding protein_coding MGP_BALBcJ_T0044181.1 MGP_BALBcJ_G0022734.1 mouse_genomes_project 16 32120255 32174071 - MGP_BALBcJ_P0044181 Sec22a protein_coding protein_coding MGP_BALBcJ_T0044182.1 MGP_BALBcJ_G0022734.1 mouse_genomes_project 16 32123194 32157642 - Sec22a protein_coding processed_transcript MGP_BALBcJ_T0044183.1 MGP_BALBcJ_G0022734.1 mouse_genomes_project 16 32158812 32173968 - Sec22a protein_coding retained_intron MGP_BALBcJ_T0044184.1 MGP_BALBcJ_G0022734.1 mouse_genomes_project 16 32170825 32174005 - Sec22a protein_coding retained_intron MGP_BALBcJ_T0044185.1 MGP_BALBcJ_G0022734.1 mouse_genomes_project 16 32171197 32174000 - Sec22a protein_coding processed_transcript MGP_BALBcJ_T0044268.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33611575 33614823 + Iqcb1 protein_coding processed_transcript MGP_BALBcJ_T0044269.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33611597 33657067 + MGP_BALBcJ_P0044269 Iqcb1 protein_coding protein_coding MGP_BALBcJ_T0044270.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33611598 33657059 + MGP_BALBcJ_P0044270 Iqcb1 protein_coding protein_coding MGP_BALBcJ_T0044271.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33631107 33635512 + Iqcb1 protein_coding retained_intron MGP_BALBcJ_T0044272.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33631502 33635530 + Iqcb1 protein_coding processed_transcript MGP_BALBcJ_T0044273.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33635391 33643838 + Iqcb1 protein_coding processed_transcript MGP_BALBcJ_T0044274.1 MGP_BALBcJ_G0022760.1 mouse_genomes_project 16 33635757 33640695 + Iqcb1 protein_coding processed_transcript MGP_BALBcJ_T0003627.1 MGP_BALBcJ_G0003285.1 mouse_genomes_project 16 486156 490837 - Gm15879 antisense antisense MGP_BALBcJ_T0003628.1 MGP_BALBcJ_G0003285.1 mouse_genomes_project 16 487688 491165 - Gm15879 antisense antisense MGP_BALBcJ_T0013125.1 MGP_BALBcJ_G0011222.1 mouse_genomes_project 16 28706217 28707097 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003648.1 MGP_BALBcJ_G0003303.1 mouse_genomes_project 16 29587342 29591065 + Gm26769 antisense antisense MGP_BALBcJ_T0000963.1 MGP_BALBcJ_G0000892.1 mouse_genomes_project 16 74580296 74580819 + TEC TEC MGP_BALBcJ_T0044715.1 MGP_BALBcJ_G0022871.1 mouse_genomes_project 16 55446811 55450384 - MGP_BALBcJ_P0044715 E330017A01Rik protein_coding protein_coding MGP_BALBcJ_T0099541.1 MGP_BALBcJ_G0037577.1 mouse_genomes_project 16 52609919 52610019 - Gm26369 snRNA snRNA MGP_BALBcJ_T0099551.1 MGP_BALBcJ_G0037587.1 mouse_genomes_project 16 89275690 89275788 + Gm23210 snRNA snRNA MGP_BALBcJ_T0010105.1 MGP_BALBcJ_G0008230.1 mouse_genomes_project 16 15948316 15948426 + Gm23612 miRNA miRNA MGP_BALBcJ_T0044338.1 MGP_BALBcJ_G0022777.1 mouse_genomes_project 16 35162793 35168581 + MGP_BALBcJ_P0044338 Gm21987 protein_coding protein_coding MGP_BALBcJ_T0044339.1 MGP_BALBcJ_G0022777.1 mouse_genomes_project 16 35162798 35168559 + Gm21987 protein_coding processed_transcript MGP_BALBcJ_T0044340.1 MGP_BALBcJ_G0022777.1 mouse_genomes_project 16 35162824 35168562 + MGP_BALBcJ_P0044340 Gm21987 protein_coding protein_coding MGP_BALBcJ_T0044341.1 MGP_BALBcJ_G0022777.1 mouse_genomes_project 16 35162842 35168549 + Gm21987 protein_coding retained_intron MGP_BALBcJ_T0044343.1 MGP_BALBcJ_G0022777.1 mouse_genomes_project 16 35165042 35168541 + Gm21987 protein_coding retained_intron MGP_BALBcJ_T0044344.1 MGP_BALBcJ_G0022777.1 mouse_genomes_project 16 35165094 35168563 + Gm21987 protein_coding processed_transcript MGP_BALBcJ_T0042900.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 536098 679987 - MGP_BALBcJ_P0042900 Crebbp protein_coding protein_coding MGP_BALBcJ_T0042901.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 538471 679050 - MGP_BALBcJ_P0042901 Crebbp protein_coding protein_coding MGP_BALBcJ_T0042902.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 541380 544515 - Crebbp protein_coding retained_intron MGP_BALBcJ_T0042903.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 542572 543367 - Crebbp protein_coding retained_intron MGP_BALBcJ_T0042904.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 543151 549872 - MGP_BALBcJ_P0042904 Crebbp protein_coding protein_coding MGP_BALBcJ_T0042905.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 546610 584822 - MGP_BALBcJ_P0042905 Crebbp protein_coding protein_coding MGP_BALBcJ_T0042906.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 546961 551354 - MGP_BALBcJ_P0042906 Crebbp protein_coding protein_coding MGP_BALBcJ_T0042907.1 MGP_BALBcJ_G0022428.1 mouse_genomes_project 16 575299 582803 - MGP_BALBcJ_P0042907 Crebbp protein_coding protein_coding MGP_BALBcJ_T0043959.1 MGP_BALBcJ_G0022682.1 mouse_genomes_project 16 27376773 27379838 + MGP_BALBcJ_P0043959 Fam43a protein_coding protein_coding MGP_BALBcJ_T0000945.1 MGP_BALBcJ_G0000875.1 mouse_genomes_project 16 14512970 14514136 + TEC TEC MGP_BALBcJ_T0043092.1 MGP_BALBcJ_G0022477.1 mouse_genomes_project 16 7324282 7326011 - MGP_BALBcJ_P0043092 Socs1 protein_coding protein_coding MGP_BALBcJ_T0044452.1 MGP_BALBcJ_G0022803.1 mouse_genomes_project 16 41028638 41124919 - MGP_BALBcJ_P0044452 Sidt1 protein_coding protein_coding MGP_BALBcJ_T0044453.1 MGP_BALBcJ_G0022803.1 mouse_genomes_project 16 41030095 41124456 - MGP_BALBcJ_P0044453 Sidt1 protein_coding protein_coding MGP_BALBcJ_T0044454.1 MGP_BALBcJ_G0022803.1 mouse_genomes_project 16 41062967 41072186 - Sidt1 protein_coding retained_intron MGP_BALBcJ_T0044455.1 MGP_BALBcJ_G0022803.1 mouse_genomes_project 16 41071745 41072845 - MGP_BALBcJ_P0044455 Sidt1 protein_coding protein_coding MGP_BALBcJ_T0044456.1 MGP_BALBcJ_G0022803.1 mouse_genomes_project 16 41074596 41124469 - Sidt1 protein_coding processed_transcript MGP_BALBcJ_T0006811.1 MGP_BALBcJ_G0005612.1 mouse_genomes_project 16 15840385 15865931 - Gm43388 lincRNA lincRNA MGP_BALBcJ_T0044645.1 MGP_BALBcJ_G0022853.1 mouse_genomes_project 16 52866763 52871974 - MGP_BALBcJ_P0044645 Trmt10c protein_coding protein_coding MGP_BALBcJ_T0044579.1 MGP_BALBcJ_G0022836.1 mouse_genomes_project 16 45696142 45698033 + MGP_BALBcJ_P0044579 Retnlg protein_coding protein_coding MGP_BALBcJ_T0000968.1 MGP_BALBcJ_G0000897.1 mouse_genomes_project 16 74749626 74750534 + TEC TEC MGP_BALBcJ_T0000121.1 MGP_BALBcJ_G0000092.1 mouse_genomes_project 16 15871356 15871840 - MGP_BALBcJ_P0000121 Iglv3 IG_V_gene IG_V_gene MGP_BALBcJ_T0013135.1 MGP_BALBcJ_G0011232.1 mouse_genomes_project 16 35500403 35500958 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044145.1 MGP_BALBcJ_G0022725.1 mouse_genomes_project 16 30595427 30620726 + MGP_BALBcJ_P0044145 Muc13 protein_coding protein_coding MGP_BALBcJ_T0044146.1 MGP_BALBcJ_G0022725.1 mouse_genomes_project 16 30595757 30620733 + MGP_BALBcJ_P0044146 Muc13 protein_coding protein_coding MGP_BALBcJ_T0010133.1 MGP_BALBcJ_G0008258.1 mouse_genomes_project 16 62382287 62382397 + Gm23659 miRNA miRNA MGP_BALBcJ_T0100794.1 MGP_BALBcJ_G0038830.1 mouse_genomes_project 16 34964527 34964659 + Gm25617 snoRNA snoRNA MGP_BALBcJ_T0043936.1 MGP_BALBcJ_G0022678.1 mouse_genomes_project 16 27079815 27082910 - MGP_BALBcJ_P0043936 Gp5 protein_coding protein_coding MGP_BALBcJ_T0099520.1 MGP_BALBcJ_G0037556.1 mouse_genomes_project 16 32042710 32042838 - Gm25179 snRNA snRNA MGP_BALBcJ_T0044627.1 MGP_BALBcJ_G0022849.1 mouse_genomes_project 16 52735271 52770636 - MGP_BALBcJ_P0044627 Cep97 protein_coding protein_coding MGP_BALBcJ_T0044628.1 MGP_BALBcJ_G0022849.1 mouse_genomes_project 16 52759543 52770638 - MGP_BALBcJ_P0044628 Cep97 protein_coding protein_coding MGP_BALBcJ_T0044629.1 MGP_BALBcJ_G0022849.1 mouse_genomes_project 16 52759550 52770695 - MGP_BALBcJ_P0044629 Cep97 protein_coding protein_coding MGP_BALBcJ_T0044630.1 MGP_BALBcJ_G0022849.1 mouse_genomes_project 16 52759738 52770674 - MGP_BALBcJ_P0044630 Cep97 protein_coding protein_coding MGP_BALBcJ_T0044000.1 MGP_BALBcJ_G0022692.1 mouse_genomes_project 16 28729929 28739397 + MGP_BALBcJ_P0044000 Ncbp2 protein_coding protein_coding MGP_BALBcJ_T0044001.1 MGP_BALBcJ_G0022692.1 mouse_genomes_project 16 28730017 28738073 + Ncbp2 protein_coding retained_intron MGP_BALBcJ_T0044002.1 MGP_BALBcJ_G0022692.1 mouse_genomes_project 16 28730022 28742706 + Ncbp2 protein_coding processed_transcript MGP_BALBcJ_T0044003.1 MGP_BALBcJ_G0022692.1 mouse_genomes_project 16 28730029 28738101 + MGP_BALBcJ_P0044003 Ncbp2 protein_coding protein_coding MGP_BALBcJ_T0043668.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17174220 17182534 + MGP_BALBcJ_P0043668 Ap2m1 protein_coding protein_coding MGP_BALBcJ_T0043669.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17174222 17183387 + MGP_BALBcJ_P0043669 Ap2m1 protein_coding protein_coding MGP_BALBcJ_T0043670.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17174291 17176582 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0043671.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17178719 17180871 + Ap2m1 protein_coding processed_transcript MGP_BALBcJ_T0043672.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17179365 17180739 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0043673.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17179495 17180614 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0043674.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17179715 17180417 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0043675.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17180646 17182287 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0043676.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17180778 17181308 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0043677.1 MGP_BALBcJ_G0022610.1 mouse_genomes_project 16 17181116 17182269 + Ap2m1 protein_coding retained_intron MGP_BALBcJ_T0098330.1 MGP_BALBcJ_G0036384.1 mouse_genomes_project 16 12448600 12449781 + pseudogene pseudogene MGP_BALBcJ_T0000954.1 MGP_BALBcJ_G0000884.1 mouse_genomes_project 16 55140410 55142691 - TEC TEC MGP_BALBcJ_T0043699.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17243740 17251182 + MGP_BALBcJ_P0043699 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043700.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17243748 17251044 + MGP_BALBcJ_P0043700 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043701.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17243748 17278230 + MGP_BALBcJ_P0043701 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043702.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17243757 17278235 + MGP_BALBcJ_P0043702 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043703.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17243941 17278230 + MGP_BALBcJ_P0043703 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043705.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17261973 17278230 + MGP_BALBcJ_P0043705 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043706.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17261990 17275349 + Ece2 protein_coding retained_intron MGP_BALBcJ_T0043707.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17261990 17278791 + MGP_BALBcJ_P0043707 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043708.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17261996 17278230 + MGP_BALBcJ_P0043708 Ece2 protein_coding protein_coding MGP_BALBcJ_T0043709.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17263290 17270272 + Ece2 protein_coding retained_intron MGP_BALBcJ_T0043710.1 MGP_BALBcJ_G0022614.1 mouse_genomes_project 16 17265387 17278800 + MGP_BALBcJ_P0043710 Ece2 protein_coding protein_coding MGP_BALBcJ_T0044752.1 MGP_BALBcJ_G0022890.1 mouse_genomes_project 16 56057580 56058510 - MGP_BALBcJ_P0044752 Olfr196 protein_coding protein_coding MGP_BALBcJ_T0044378.1 MGP_BALBcJ_G0022787.1 mouse_genomes_project 16 35551821 35579201 + MGP_BALBcJ_P0044378 B4galt4 protein_coding protein_coding MGP_BALBcJ_T0044379.1 MGP_BALBcJ_G0022787.1 mouse_genomes_project 16 35551864 35579195 + MGP_BALBcJ_P0044379 B4galt4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044380.1 MGP_BALBcJ_G0022787.1 mouse_genomes_project 16 35571156 35578658 + MGP_BALBcJ_P0044380 B4galt4 protein_coding protein_coding MGP_BALBcJ_T0044381.1 MGP_BALBcJ_G0022787.1 mouse_genomes_project 16 35573237 35576625 + B4galt4 protein_coding retained_intron MGP_BALBcJ_T0013118.1 MGP_BALBcJ_G0011215.1 mouse_genomes_project 16 18962015 18962410 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013145.1 MGP_BALBcJ_G0011242.1 mouse_genomes_project 16 42252306 42253073 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044972.1 MGP_BALBcJ_G0022987.1 mouse_genomes_project 16 86401434 86401962 + MGP_BALBcJ_P0044972 Krtap20-2 protein_coding protein_coding MGP_BALBcJ_T0013165.1 MGP_BALBcJ_G0011262.1 mouse_genomes_project 16 72819229 72819659 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044241.1 MGP_BALBcJ_G0022756.1 mouse_genomes_project 16 33389222 33451563 - MGP_BALBcJ_P0044241 Cd86 protein_coding protein_coding MGP_BALBcJ_T0044242.1 MGP_BALBcJ_G0022756.1 mouse_genomes_project 16 33389250 33389873 - Cd86 protein_coding processed_transcript MGP_BALBcJ_T0044243.1 MGP_BALBcJ_G0022756.1 mouse_genomes_project 16 33406043 33428132 - MGP_BALBcJ_P0044243 Cd86 protein_coding protein_coding MGP_BALBcJ_T0044244.1 MGP_BALBcJ_G0022756.1 mouse_genomes_project 16 33446291 33451567 - Cd86 protein_coding processed_transcript MGP_BALBcJ_T0010102.1 MGP_BALBcJ_G0008227.1 mouse_genomes_project 16 14878174 14878262 - Gm24572 miRNA miRNA MGP_BALBcJ_T0006855.1 MGP_BALBcJ_G0005645.1 mouse_genomes_project 16 87760370 87761093 + 1110008E08Rik lincRNA lincRNA MGP_BALBcJ_T0006856.1 MGP_BALBcJ_G0005645.1 mouse_genomes_project 16 87760370 87761091 + 1110008E08Rik lincRNA lincRNA MGP_BALBcJ_T0043627.1 MGP_BALBcJ_G0022600.1 mouse_genomes_project 16 16498280 16505052 - MGP_BALBcJ_P0043627 A930003A15Rik protein_coding protein_coding MGP_BALBcJ_T0013152.1 MGP_BALBcJ_G0011249.1 mouse_genomes_project 16 46112066 46112719 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099532.1 MGP_BALBcJ_G0037568.1 mouse_genomes_project 16 35728133 35728232 + Gm22500 snRNA snRNA MGP_BALBcJ_T0013106.1 MGP_BALBcJ_G0011203.1 mouse_genomes_project 16 15556871 15557160 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043611.1 MGP_BALBcJ_G0022591.1 mouse_genomes_project 16 16027814 16028854 - MGP_BALBcJ_P0043611 protein_coding protein_coding MGP_BALBcJ_T0043613.1 MGP_BALBcJ_G0022591.1 mouse_genomes_project 16 16028410 16041210 - MGP_BALBcJ_P0043613 protein_coding protein_coding MGP_BALBcJ_T0013138.1 MGP_BALBcJ_G0011235.1 mouse_genomes_project 16 36732786 36733784 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010107.1 MGP_BALBcJ_G0008232.1 mouse_genomes_project 16 17236599 17236684 + Mir1224 miRNA miRNA MGP_BALBcJ_T0043183.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10391856 10407330 + Ntan1 protein_coding processed_transcript MGP_BALBcJ_T0043184.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10391878 10407447 + Ntan1 protein_coding processed_transcript MGP_BALBcJ_T0043185.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10391885 10410343 + Ntan1 protein_coding processed_transcript MGP_BALBcJ_T0043186.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10391923 10401996 + Ntan1 protein_coding retained_intron MGP_BALBcJ_T0043187.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10391935 10410346 + MGP_BALBcJ_P0043187 Ntan1 protein_coding protein_coding MGP_BALBcJ_T0043188.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10406502 10407593 + Ntan1 protein_coding retained_intron MGP_BALBcJ_T0043191.1 MGP_BALBcJ_G0022502.1 mouse_genomes_project 16 10408976 10410061 + Ntan1 protein_coding retained_intron MGP_BALBcJ_T0043876.1 MGP_BALBcJ_G0022659.1 mouse_genomes_project 16 22767293 22917263 - MGP_BALBcJ_P0043876 P3h2 protein_coding protein_coding MGP_BALBcJ_T0043877.1 MGP_BALBcJ_G0022659.1 mouse_genomes_project 16 22780270 22793217 - P3h2 protein_coding retained_intron MGP_BALBcJ_T0043878.1 MGP_BALBcJ_G0022659.1 mouse_genomes_project 16 22793546 22800834 - P3h2 protein_coding processed_transcript MGP_BALBcJ_T0043879.1 MGP_BALBcJ_G0022659.1 mouse_genomes_project 16 22805203 22821999 - P3h2 protein_coding processed_transcript MGP_BALBcJ_T0013111.1 MGP_BALBcJ_G0011208.1 mouse_genomes_project 16 16289312 16289819 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043215.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10749030 10778853 + MGP_BALBcJ_P0043215 Nde1 protein_coding protein_coding MGP_BALBcJ_T0043216.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10749042 10778753 + MGP_BALBcJ_P0043216 Nde1 protein_coding protein_coding MGP_BALBcJ_T0043217.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10749053 10778843 + MGP_BALBcJ_P0043217 Nde1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043218.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10749059 10756552 + Nde1 protein_coding retained_intron MGP_BALBcJ_T0043219.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10749100 10778843 + MGP_BALBcJ_P0043219 Nde1 protein_coding protein_coding MGP_BALBcJ_T0043220.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10749104 10776365 + Nde1 protein_coding processed_transcript MGP_BALBcJ_T0043221.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10761065 10774328 + Nde1 protein_coding retained_intron MGP_BALBcJ_T0043222.1 MGP_BALBcJ_G0022508.1 mouse_genomes_project 16 10769505 10776445 + MGP_BALBcJ_P0043222 Nde1 protein_coding protein_coding MGP_BALBcJ_T0102265.1 MGP_BALBcJ_G0040081.1 mouse_genomes_project 16 73675 74615 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0043797.1 MGP_BALBcJ_G0022635.1 mouse_genomes_project 16 19112645 19172460 - MGP_BALBcJ_P0043797 Etv5 protein_coding protein_coding MGP_BALBcJ_T0043798.1 MGP_BALBcJ_G0022635.1 mouse_genomes_project 16 19112652 19169229 - MGP_BALBcJ_P0043798 Etv5 protein_coding protein_coding MGP_BALBcJ_T0043799.1 MGP_BALBcJ_G0022635.1 mouse_genomes_project 16 19115161 19133654 - MGP_BALBcJ_P0043799 Etv5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043800.1 MGP_BALBcJ_G0022635.1 mouse_genomes_project 16 19133688 19172320 - Etv5 protein_coding processed_transcript MGP_BALBcJ_T0043801.1 MGP_BALBcJ_G0022635.1 mouse_genomes_project 16 19144744 19172274 - MGP_BALBcJ_P0043801 Etv5 protein_coding protein_coding MGP_BALBcJ_T0043518.1 MGP_BALBcJ_G0022573.1 mouse_genomes_project 16 14847156 14882871 - MGP_BALBcJ_P0043518 Dgcr8 protein_coding protein_coding MGP_BALBcJ_T0043519.1 MGP_BALBcJ_G0022573.1 mouse_genomes_project 16 14847165 14882874 - MGP_BALBcJ_P0043519 Dgcr8 protein_coding protein_coding MGP_BALBcJ_T0043520.1 MGP_BALBcJ_G0022573.1 mouse_genomes_project 16 14848149 14858880 - Dgcr8 protein_coding processed_transcript MGP_BALBcJ_T0043521.1 MGP_BALBcJ_G0022573.1 mouse_genomes_project 16 14864852 14878188 - Dgcr8 protein_coding retained_intron MGP_BALBcJ_T0043522.1 MGP_BALBcJ_G0022573.1 mouse_genomes_project 16 14865035 14873871 - Dgcr8 protein_coding retained_intron MGP_BALBcJ_T0043523.1 MGP_BALBcJ_G0022573.1 mouse_genomes_project 16 14881207 14882795 - Dgcr8 protein_coding processed_transcript MGP_BALBcJ_T0017452.1 MGP_BALBcJ_G0015253.1 mouse_genomes_project 16 19283785 19286382 + Gm15651 processed_transcript processed_transcript MGP_BALBcJ_T0043445.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14234955 14237901 + Ccdc74a protein_coding retained_intron MGP_BALBcJ_T0043446.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14234960 14239224 + MGP_BALBcJ_P0043446 Ccdc74a protein_coding protein_coding MGP_BALBcJ_T0043447.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14234960 14237727 + MGP_BALBcJ_P0043447 Ccdc74a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043448.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235036 14236959 + Ccdc74a protein_coding retained_intron MGP_BALBcJ_T0043449.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235049 14239223 + MGP_BALBcJ_P0043449 Ccdc74a protein_coding protein_coding MGP_BALBcJ_T0043450.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235050 14238895 + MGP_BALBcJ_P0043450 Ccdc74a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043451.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235098 14239224 + MGP_BALBcJ_P0043451 Ccdc74a protein_coding protein_coding MGP_BALBcJ_T0043452.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235103 14238933 + MGP_BALBcJ_P0043452 Ccdc74a protein_coding protein_coding MGP_BALBcJ_T0043453.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235158 14236347 + Ccdc74a protein_coding retained_intron MGP_BALBcJ_T0043454.1 MGP_BALBcJ_G0022552.1 mouse_genomes_project 16 14235185 14239224 + MGP_BALBcJ_P0043454 Ccdc74a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043343.1 MGP_BALBcJ_G0022536.1 mouse_genomes_project 16 13709264 13715925 + MGP_BALBcJ_P0043343 Ydjc protein_coding protein_coding MGP_BALBcJ_T0043344.1 MGP_BALBcJ_G0022536.1 mouse_genomes_project 16 13710486 13713490 + Ydjc protein_coding retained_intron MGP_BALBcJ_T0043345.1 MGP_BALBcJ_G0022536.1 mouse_genomes_project 16 13711580 13725413 + MGP_BALBcJ_P0043345 Ydjc protein_coding protein_coding MGP_BALBcJ_T0043346.1 MGP_BALBcJ_G0022536.1 mouse_genomes_project 16 13711592 13716341 + Ydjc protein_coding retained_intron MGP_BALBcJ_T0043347.1 MGP_BALBcJ_G0022536.1 mouse_genomes_project 16 13711619 13713490 + Ydjc protein_coding retained_intron MGP_BALBcJ_T0043348.1 MGP_BALBcJ_G0022536.1 mouse_genomes_project 16 13711622 13713490 + MGP_BALBcJ_P0043348 Ydjc protein_coding protein_coding MGP_BALBcJ_T0017466.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74324961 74692946 + processed_transcript lincRNA MGP_BALBcJ_T0017467.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74324961 74455741 + processed_transcript lincRNA MGP_BALBcJ_T0017468.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74324963 74691477 + processed_transcript lincRNA MGP_BALBcJ_T0017469.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74419858 74775401 + processed_transcript lincRNA MGP_BALBcJ_T0017470.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74419866 74452877 + processed_transcript lincRNA MGP_BALBcJ_T0017471.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74419883 74689446 + processed_transcript lincRNA MGP_BALBcJ_T0017472.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74419937 74692967 + processed_transcript lincRNA MGP_BALBcJ_T0017473.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74420006 74652707 + processed_transcript lincRNA MGP_BALBcJ_T0017474.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74420182 74788640 + processed_transcript lincRNA MGP_BALBcJ_T0017475.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74551011 74553496 + processed_transcript TEC MGP_BALBcJ_T0017476.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74594730 74693054 + processed_transcript lincRNA MGP_BALBcJ_T0017477.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74594882 74788644 + processed_transcript lincRNA MGP_BALBcJ_T0017478.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74688349 74690597 + processed_transcript TEC MGP_BALBcJ_T0017479.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74688887 74689490 + processed_transcript lincRNA MGP_BALBcJ_T0017480.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74765448 74788638 + processed_transcript lincRNA MGP_BALBcJ_T0017481.1 MGP_BALBcJ_G0015262.1 mouse_genomes_project 16 74775112 74788638 + processed_transcript lincRNA MGP_BALBcJ_T0044219.1 MGP_BALBcJ_G0022743.1 mouse_genomes_project 16 32854674 32856458 + MGP_BALBcJ_P0044219 Wdr5b protein_coding protein_coding MGP_BALBcJ_T0003673.1 MGP_BALBcJ_G0003321.1 mouse_genomes_project 16 63840176 63850157 + 4933411O13Rik antisense antisense MGP_BALBcJ_T0003674.1 MGP_BALBcJ_G0003321.1 mouse_genomes_project 16 63840182 63860550 + 4933411O13Rik antisense antisense MGP_BALBcJ_T0003675.1 MGP_BALBcJ_G0003321.1 mouse_genomes_project 16 63840184 63842689 + 4933411O13Rik antisense antisense MGP_BALBcJ_T0000044.1 MGP_BALBcJ_G0000036.1 mouse_genomes_project 16 15822557 15822595 - MGP_BALBcJ_P0000044 Iglj2 IG_J_gene IG_J_gene MGP_BALBcJ_T0017453.1 MGP_BALBcJ_G0015254.1 mouse_genomes_project 16 19950904 19999123 + B630019A10Rik processed_transcript processed_transcript MGP_BALBcJ_T0044174.1 MGP_BALBcJ_G0022729.1 mouse_genomes_project 16 31447842 31477050 + MGP_BALBcJ_P0044174 Ropn1 protein_coding protein_coding MGP_BALBcJ_T0044175.1 MGP_BALBcJ_G0022729.1 mouse_genomes_project 16 31449109 31478467 + MGP_BALBcJ_P0044175 Ropn1 protein_coding protein_coding MGP_BALBcJ_T0010142.1 MGP_BALBcJ_G0008267.1 mouse_genomes_project 16 88163593 88163667 + Gm22933 miRNA miRNA MGP_BALBcJ_T0013158.1 MGP_BALBcJ_G0011255.1 mouse_genomes_project 16 57341849 57342252 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044971.1 MGP_BALBcJ_G0022986.1 mouse_genomes_project 16 86374818 86375283 + MGP_BALBcJ_P0044971 1110057P08Rik protein_coding protein_coding MGP_BALBcJ_T0043093.1 MGP_BALBcJ_G0022478.1 mouse_genomes_project 16 7328410 7329130 - MGP_BALBcJ_P0043093 Tnp2 protein_coding protein_coding MGP_BALBcJ_T0044596.1 MGP_BALBcJ_G0022840.1 mouse_genomes_project 16 46516904 46581926 + MGP_BALBcJ_P0044596 Ift57 protein_coding protein_coding MGP_BALBcJ_T0044597.1 MGP_BALBcJ_G0022840.1 mouse_genomes_project 16 46516975 46579428 + MGP_BALBcJ_P0044597 Ift57 protein_coding protein_coding MGP_BALBcJ_T0044598.1 MGP_BALBcJ_G0022840.1 mouse_genomes_project 16 46517026 46532425 + Ift57 protein_coding processed_transcript MGP_BALBcJ_T0044599.1 MGP_BALBcJ_G0022840.1 mouse_genomes_project 16 46531479 46580916 + MGP_BALBcJ_P0044599 Ift57 protein_coding protein_coding MGP_BALBcJ_T0044724.1 MGP_BALBcJ_G0022875.1 mouse_genomes_project 16 55562028 55563270 - MGP_BALBcJ_P0044724 Olfr172 protein_coding protein_coding MGP_BALBcJ_T0044994.1 MGP_BALBcJ_G0022995.1 mouse_genomes_project 16 87429164 87485641 - MGP_BALBcJ_P0044994 Scaf4 protein_coding protein_coding MGP_BALBcJ_T0044995.1 MGP_BALBcJ_G0022995.1 mouse_genomes_project 16 87429363 87485758 - MGP_BALBcJ_P0044995 Scaf4 protein_coding protein_coding MGP_BALBcJ_T0044902.1 MGP_BALBcJ_G0022946.1 mouse_genomes_project 16 84554644 84611448 - MGP_BALBcJ_P0044902 Ltn1 protein_coding protein_coding MGP_BALBcJ_T0100798.1 MGP_BALBcJ_G0038834.1 mouse_genomes_project 16 40679202 40679335 - Gm25989 snoRNA snoRNA MGP_BALBcJ_T0042896.1 MGP_BALBcJ_G0022427.1 mouse_genomes_project 16 493288 532597 - MGP_BALBcJ_P0042896 Trap1 protein_coding protein_coding MGP_BALBcJ_T0042897.1 MGP_BALBcJ_G0022427.1 mouse_genomes_project 16 493457 498016 - Trap1 protein_coding processed_transcript MGP_BALBcJ_T0042898.1 MGP_BALBcJ_G0022427.1 mouse_genomes_project 16 510143 532545 - MGP_BALBcJ_P0042898 Trap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042899.1 MGP_BALBcJ_G0022427.1 mouse_genomes_project 16 519025 532597 - Trap1 protein_coding retained_intron MGP_BALBcJ_T0044615.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49066878 49269819 - MGP_BALBcJ_P0044615 Alcam protein_coding protein_coding MGP_BALBcJ_T0044616.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49068973 49112875 - MGP_BALBcJ_P0044616 Alcam protein_coding protein_coding MGP_BALBcJ_T0044617.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49069353 49268210 - MGP_BALBcJ_P0044617 Alcam protein_coding protein_coding MGP_BALBcJ_T0044618.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49071074 49090674 - Alcam protein_coding retained_intron MGP_BALBcJ_T0044619.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49071107 49092728 - Alcam protein_coding retained_intron MGP_BALBcJ_T0044620.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49089773 49268210 - MGP_BALBcJ_P0044620 Alcam protein_coding protein_coding MGP_BALBcJ_T0044621.1 MGP_BALBcJ_G0022845.1 mouse_genomes_project 16 49121212 49268399 - MGP_BALBcJ_P0044621 Alcam protein_coding protein_coding MGP_BALBcJ_T0045237.1 MGP_BALBcJ_G0023043.1 mouse_genomes_project 16 91847016 91971857 + MGP_BALBcJ_P0045237 Dyrk1a protein_coding protein_coding MGP_BALBcJ_T0045238.1 MGP_BALBcJ_G0023043.1 mouse_genomes_project 16 91847485 91968998 + MGP_BALBcJ_P0045238 Dyrk1a protein_coding protein_coding MGP_BALBcJ_T0045239.1 MGP_BALBcJ_G0023043.1 mouse_genomes_project 16 91847870 91942849 + MGP_BALBcJ_P0045239 Dyrk1a protein_coding protein_coding MGP_BALBcJ_T0045240.1 MGP_BALBcJ_G0023043.1 mouse_genomes_project 16 91847913 91972307 + MGP_BALBcJ_P0045240 Dyrk1a protein_coding protein_coding MGP_BALBcJ_T0045241.1 MGP_BALBcJ_G0023043.1 mouse_genomes_project 16 91847913 91945733 + MGP_BALBcJ_P0045241 Dyrk1a protein_coding protein_coding MGP_BALBcJ_T0045242.1 MGP_BALBcJ_G0023043.1 mouse_genomes_project 16 91945797 91955817 + Dyrk1a protein_coding retained_intron MGP_BALBcJ_T0043576.1 MGP_BALBcJ_G0022580.1 mouse_genomes_project 16 15183104 15188361 - MGP_BALBcJ_P0043576 Tbx1 protein_coding protein_coding MGP_BALBcJ_T0000970.1 MGP_BALBcJ_G0000899.1 mouse_genomes_project 16 76744912 76745512 + TEC TEC MGP_BALBcJ_T0043779.1 MGP_BALBcJ_G0022628.1 mouse_genomes_project 16 18613959 18654224 + MGP_BALBcJ_P0043779 Map3k13 protein_coding protein_coding MGP_BALBcJ_T0043035.1 MGP_BALBcJ_G0022463.1 mouse_genomes_project 16 5184196 5197763 - MGP_BALBcJ_P0043035 Carhsp1 protein_coding protein_coding MGP_BALBcJ_T0044754.1 MGP_BALBcJ_G0022892.1 mouse_genomes_project 16 56121244 56122171 - MGP_BALBcJ_P0044754 protein_coding protein_coding MGP_BALBcJ_T0044342.1 MGP_BALBcJ_G0022778.1 mouse_genomes_project 16 35162842 35178150 + MGP_BALBcJ_P0044342 protein_coding protein_coding MGP_BALBcJ_T0043910.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26171640 26227370 - MGP_BALBcJ_P0043910 Atp13a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043911.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26171815 26306800 - MGP_BALBcJ_P0043911 Atp13a4 protein_coding protein_coding MGP_BALBcJ_T0043912.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26171827 26306686 - MGP_BALBcJ_P0043912 Atp13a4 protein_coding protein_coding MGP_BALBcJ_T0043913.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26171833 26184523 - Atp13a4 protein_coding processed_transcript MGP_BALBcJ_T0043914.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26171873 26312437 - MGP_BALBcJ_P0043914 Atp13a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043915.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26172199 26183621 - Atp13a4 protein_coding retained_intron MGP_BALBcJ_T0043916.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26184865 26216728 - Atp13a4 protein_coding retained_intron MGP_BALBcJ_T0043917.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26197354 26217771 - MGP_BALBcJ_P0043917 Atp13a4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043918.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26197363 26312437 - MGP_BALBcJ_P0043918 Atp13a4 protein_coding protein_coding MGP_BALBcJ_T0043919.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26305626 26312371 - Atp13a4 protein_coding retained_intron MGP_BALBcJ_T0043920.1 MGP_BALBcJ_G0022672.1 mouse_genomes_project 16 26305679 26312432 - Atp13a4 protein_coding retained_intron MGP_BALBcJ_T0044559.1 MGP_BALBcJ_G0022826.1 mouse_genomes_project 16 42785988 42838414 - MGP_BALBcJ_P0044559 Plcxd2 protein_coding protein_coding MGP_BALBcJ_T0043505.1 MGP_BALBcJ_G0022571.1 mouse_genomes_project 16 14832991 14841903 - MGP_BALBcJ_P0043505 Ranbp1 protein_coding protein_coding MGP_BALBcJ_T0043506.1 MGP_BALBcJ_G0022571.1 mouse_genomes_project 16 14838177 14841855 - Ranbp1 protein_coding retained_intron MGP_BALBcJ_T0043507.1 MGP_BALBcJ_G0022571.1 mouse_genomes_project 16 14838413 14841643 - Ranbp1 protein_coding processed_transcript MGP_BALBcJ_T0098849.1 MGP_BALBcJ_G0036898.1 mouse_genomes_project 16 10903600 10904812 - Gm15869 sense_intronic sense_intronic MGP_BALBcJ_T0043618.1 MGP_BALBcJ_G0022597.1 mouse_genomes_project 16 16190972 16191932 - MGP_BALBcJ_P0043618 protein_coding protein_coding MGP_BALBcJ_T0044485.1 MGP_BALBcJ_G0022809.1 mouse_genomes_project 16 41577598 41612001 + MGP_BALBcJ_P0044485 Cd200r1 protein_coding protein_coding MGP_BALBcJ_T0017489.1 MGP_BALBcJ_G0015268.1 mouse_genomes_project 16 88910054 88937639 + Gm10785 processed_transcript processed_transcript MGP_BALBcJ_T0044126.1 MGP_BALBcJ_G0022719.1 mouse_genomes_project 16 29844786 29909391 + MGP_BALBcJ_P0044126 Lmln protein_coding protein_coding MGP_BALBcJ_T0044127.1 MGP_BALBcJ_G0022719.1 mouse_genomes_project 16 29873179 29886731 + Lmln protein_coding retained_intron MGP_BALBcJ_T0044128.1 MGP_BALBcJ_G0022719.1 mouse_genomes_project 16 29898455 29905566 + Lmln protein_coding retained_intron MGP_BALBcJ_T0044129.1 MGP_BALBcJ_G0022719.1 mouse_genomes_project 16 29905919 29907261 + Lmln protein_coding processed_transcript MGP_BALBcJ_T0044560.1 MGP_BALBcJ_G0022827.1 mouse_genomes_project 16 42863277 42945862 - MGP_BALBcJ_P0044560 Cd96 protein_coding protein_coding MGP_BALBcJ_T0099542.1 MGP_BALBcJ_G0037578.1 mouse_genomes_project 16 59540807 59540911 + Gm24164 snRNA snRNA MGP_BALBcJ_T0010143.1 MGP_BALBcJ_G0008268.1 mouse_genomes_project 16 88745409 88745511 - Mir6367 miRNA miRNA MGP_BALBcJ_T0043007.1 MGP_BALBcJ_G0022456.1 mouse_genomes_project 16 1731384 1742900 - MGP_BALBcJ_P0043007 Eef2kmt protein_coding protein_coding MGP_BALBcJ_T0043008.1 MGP_BALBcJ_G0022456.1 mouse_genomes_project 16 1732111 1742858 - Eef2kmt protein_coding retained_intron MGP_BALBcJ_T0043009.1 MGP_BALBcJ_G0022456.1 mouse_genomes_project 16 1734297 1742873 - MGP_BALBcJ_P0043009 Eef2kmt protein_coding protein_coding MGP_BALBcJ_T0043010.1 MGP_BALBcJ_G0022456.1 mouse_genomes_project 16 1734309 1735793 - Eef2kmt protein_coding retained_intron MGP_BALBcJ_T0043011.1 MGP_BALBcJ_G0022456.1 mouse_genomes_project 16 1735997 1742846 - Eef2kmt protein_coding retained_intron MGP_BALBcJ_T0043058.1 MGP_BALBcJ_G0022469.1 mouse_genomes_project 16 6729487 6777763 + MGP_BALBcJ_P0043058 Atf7ip2 protein_coding protein_coding MGP_BALBcJ_T0043059.1 MGP_BALBcJ_G0022469.1 mouse_genomes_project 16 6729681 6771997 + MGP_BALBcJ_P0043059 Atf7ip2 protein_coding protein_coding MGP_BALBcJ_T0043060.1 MGP_BALBcJ_G0022469.1 mouse_genomes_project 16 6729697 6775526 + MGP_BALBcJ_P0043060 Atf7ip2 protein_coding protein_coding MGP_BALBcJ_T0043061.1 MGP_BALBcJ_G0022469.1 mouse_genomes_project 16 6729722 6753144 + Atf7ip2 protein_coding retained_intron MGP_BALBcJ_T0100822.1 MGP_BALBcJ_G0038858.1 mouse_genomes_project 16 84950740 84950828 - Gm23994 snoRNA snoRNA MGP_BALBcJ_T0013126.1 MGP_BALBcJ_G0011223.1 mouse_genomes_project 16 28751204 28751649 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006817.1 MGP_BALBcJ_G0005616.1 mouse_genomes_project 16 18630459 18631315 - 2610020F03Rik lincRNA lincRNA MGP_BALBcJ_T0044741.1 MGP_BALBcJ_G0022883.1 mouse_genomes_project 16 55889630 55890635 - MGP_BALBcJ_P0044741 Olfr186 protein_coding protein_coding MGP_BALBcJ_T0044742.1 MGP_BALBcJ_G0022883.1 mouse_genomes_project 16 55890227 55892930 - MGP_BALBcJ_P0044742 Olfr186 protein_coding protein_coding MGP_BALBcJ_T0044319.1 MGP_BALBcJ_G0022769.1 mouse_genomes_project 16 34440314 34447599 - MGP_BALBcJ_P0044319 Ndufb4 protein_coding protein_coding MGP_BALBcJ_T0044320.1 MGP_BALBcJ_G0022769.1 mouse_genomes_project 16 34440745 34442504 - Ndufb4 protein_coding retained_intron MGP_BALBcJ_T0017447.1 MGP_BALBcJ_G0015249.1 mouse_genomes_project 16 1741702 1778454 + Gm15983 processed_transcript processed_transcript MGP_BALBcJ_T0099530.1 MGP_BALBcJ_G0037566.1 mouse_genomes_project 16 33223565 33223668 + Gm25903 snRNA snRNA MGP_BALBcJ_T0044237.1 MGP_BALBcJ_G0022755.1 mouse_genomes_project 16 33277473 33347613 - MGP_BALBcJ_P0044237 Casr protein_coding protein_coding MGP_BALBcJ_T0044238.1 MGP_BALBcJ_G0022755.1 mouse_genomes_project 16 33277473 33347613 - MGP_BALBcJ_P0044238 Casr protein_coding protein_coding MGP_BALBcJ_T0044239.1 MGP_BALBcJ_G0022755.1 mouse_genomes_project 16 33278244 33347085 - MGP_BALBcJ_P0044239 Casr protein_coding protein_coding MGP_BALBcJ_T0044240.1 MGP_BALBcJ_G0022755.1 mouse_genomes_project 16 33301782 33347620 - Casr protein_coding processed_transcript MGP_BALBcJ_T0013143.1 MGP_BALBcJ_G0011240.1 mouse_genomes_project 16 42012865 42013267 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010126.1 MGP_BALBcJ_G0008251.1 mouse_genomes_project 16 47562291 47562405 + Mir6363 miRNA miRNA MGP_BALBcJ_T0043384.1 MGP_BALBcJ_G0022544.1 mouse_genomes_project 16 14019312 14053510 + MGP_BALBcJ_P0043384 Crkl protein_coding protein_coding MGP_BALBcJ_T0044798.1 MGP_BALBcJ_G0022912.1 mouse_genomes_project 16 61818345 61825857 + MGP_BALBcJ_P0044798 Cggbp1 protein_coding protein_coding MGP_BALBcJ_T0044799.1 MGP_BALBcJ_G0022912.1 mouse_genomes_project 16 61819051 61822336 + Cggbp1 protein_coding retained_intron MGP_BALBcJ_T0043895.1 MGP_BALBcJ_G0022667.1 mouse_genomes_project 16 24177195 24232673 + MGP_BALBcJ_P0043895 Ccdc50 protein_coding protein_coding MGP_BALBcJ_T0043896.1 MGP_BALBcJ_G0022667.1 mouse_genomes_project 16 24177306 24226906 + MGP_BALBcJ_P0043896 Ccdc50 protein_coding protein_coding MGP_BALBcJ_T0043897.1 MGP_BALBcJ_G0022667.1 mouse_genomes_project 16 24177306 24220194 + MGP_BALBcJ_P0043897 Ccdc50 protein_coding protein_coding MGP_BALBcJ_T0043898.1 MGP_BALBcJ_G0022667.1 mouse_genomes_project 16 24178262 24218874 + MGP_BALBcJ_P0043898 Ccdc50 protein_coding protein_coding MGP_BALBcJ_T0043899.1 MGP_BALBcJ_G0022667.1 mouse_genomes_project 16 24178294 24179418 + Ccdc50 protein_coding processed_transcript MGP_BALBcJ_T0044893.1 MGP_BALBcJ_G0022942.1 mouse_genomes_project 16 82577505 82700200 - MGP_BALBcJ_P0044893 Cyyr1 protein_coding protein_coding MGP_BALBcJ_T0044894.1 MGP_BALBcJ_G0022942.1 mouse_genomes_project 16 82606959 82700200 - MGP_BALBcJ_P0044894 Cyyr1 protein_coding protein_coding MGP_BALBcJ_T0006849.1 MGP_BALBcJ_G0005642.1 mouse_genomes_project 16 74086503 74093862 - lincRNA lincRNA MGP_BALBcJ_T0006850.1 MGP_BALBcJ_G0005642.1 mouse_genomes_project 16 74089614 74093868 - lincRNA lincRNA MGP_BALBcJ_T0017490.1 MGP_BALBcJ_G0015269.1 mouse_genomes_project 16 89154147 89185892 + D430001F17Rik processed_transcript processed_transcript MGP_BALBcJ_T0044976.1 MGP_BALBcJ_G0022991.1 mouse_genomes_project 16 86699826 86700446 - MGP_BALBcJ_P0044976 Krtap7-1 protein_coding protein_coding MGP_BALBcJ_T0044853.1 MGP_BALBcJ_G0022927.1 mouse_genomes_project 16 74097099 74201117 + MGP_BALBcJ_P0044853 Usp25 protein_coding protein_coding MGP_BALBcJ_T0043248.1 MGP_BALBcJ_G0022519.1 mouse_genomes_project 16 12409004 12424452 - MGP_BALBcJ_P0043248 Mzt2 protein_coding protein_coding MGP_BALBcJ_T0043249.1 MGP_BALBcJ_G0022519.1 mouse_genomes_project 16 12409006 12423827 - Mzt2 protein_coding retained_intron MGP_BALBcJ_T0043250.1 MGP_BALBcJ_G0022519.1 mouse_genomes_project 16 12409013 12424474 - MGP_BALBcJ_P0043250 Mzt2 protein_coding protein_coding MGP_BALBcJ_T0006803.1 MGP_BALBcJ_G0005605.1 mouse_genomes_project 16 7556177 7563161 + Gm4262 lincRNA lincRNA MGP_BALBcJ_T0044970.1 MGP_BALBcJ_G0022985.1 mouse_genomes_project 16 86369569 86369728 + MGP_BALBcJ_P0044970 Gm7735 protein_coding protein_coding MGP_BALBcJ_T0000944.1 MGP_BALBcJ_G0000874.1 mouse_genomes_project 16 636463 639067 - TEC TEC MGP_BALBcJ_T0010123.1 MGP_BALBcJ_G0008248.1 mouse_genomes_project 16 40587233 40587344 + Gm25996 miRNA miRNA MGP_BALBcJ_T0042912.1 MGP_BALBcJ_G0022430.1 mouse_genomes_project 16 947330 996414 - MGP_BALBcJ_P0042912 Srl protein_coding protein_coding MGP_BALBcJ_T0042913.1 MGP_BALBcJ_G0022430.1 mouse_genomes_project 16 947342 996414 - MGP_BALBcJ_P0042913 Srl protein_coding protein_coding MGP_BALBcJ_T0042914.1 MGP_BALBcJ_G0022430.1 mouse_genomes_project 16 954612 1020486 - Srl protein_coding processed_transcript MGP_BALBcJ_T0042915.1 MGP_BALBcJ_G0022430.1 mouse_genomes_project 16 960635 996402 - Srl protein_coding retained_intron MGP_BALBcJ_T0010147.1 MGP_BALBcJ_G0008272.1 mouse_genomes_project 16 91443763 91443873 - Gm23062 miRNA miRNA MGP_BALBcJ_T0043893.1 MGP_BALBcJ_G0022665.1 mouse_genomes_project 16 24089603 24135702 + MGP_BALBcJ_P0043893 Ostn protein_coding protein_coding MGP_BALBcJ_T0043491.1 MGP_BALBcJ_G0022567.1 mouse_genomes_project 16 14649620 14679683 - MGP_BALBcJ_P0043491 Prodh protein_coding protein_coding MGP_BALBcJ_T0043497.1 MGP_BALBcJ_G0022567.1 mouse_genomes_project 16 14661847 14679677 - MGP_BALBcJ_P0043497 Prodh protein_coding protein_coding MGP_BALBcJ_T0043498.1 MGP_BALBcJ_G0022567.1 mouse_genomes_project 16 14662251 14669802 - MGP_BALBcJ_P0043498 Prodh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043499.1 MGP_BALBcJ_G0022567.1 mouse_genomes_project 16 14662381 14670476 - MGP_BALBcJ_P0043499 Prodh protein_coding protein_coding MGP_BALBcJ_T0043500.1 MGP_BALBcJ_G0022567.1 mouse_genomes_project 16 14671545 14672853 - Prodh protein_coding processed_transcript MGP_BALBcJ_T0043501.1 MGP_BALBcJ_G0022567.1 mouse_genomes_project 16 14674737 14679542 - MGP_BALBcJ_P0043501 Prodh protein_coding protein_coding MGP_BALBcJ_T0045336.1 MGP_BALBcJ_G0023063.1 mouse_genomes_project 16 95061905 95082802 - MGP_BALBcJ_P0045336 Ripk4 protein_coding protein_coding MGP_BALBcJ_T0044457.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41143343 41184782 + MGP_BALBcJ_P0044457 Spice1 protein_coding protein_coding MGP_BALBcJ_T0044458.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41143636 41166751 + Spice1 protein_coding processed_transcript MGP_BALBcJ_T0044459.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41144268 41163733 + Spice1 protein_coding processed_transcript MGP_BALBcJ_T0044460.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41163635 41166389 + Spice1 protein_coding retained_intron MGP_BALBcJ_T0044461.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41163705 41166756 + Spice1 protein_coding retained_intron MGP_BALBcJ_T0044462.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41166006 41181968 + Spice1 protein_coding retained_intron MGP_BALBcJ_T0044463.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41166448 41169620 + Spice1 protein_coding processed_transcript MGP_BALBcJ_T0044464.1 MGP_BALBcJ_G0022804.1 mouse_genomes_project 16 41181645 41183394 + Spice1 protein_coding retained_intron MGP_BALBcJ_T0000947.1 MGP_BALBcJ_G0000877.1 mouse_genomes_project 16 15873674 15874984 + TEC TEC MGP_BALBcJ_T0013121.1 MGP_BALBcJ_G0011218.1 mouse_genomes_project 16 20500170 20501757 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099524.1 MGP_BALBcJ_G0037560.1 mouse_genomes_project 16 32997912 32998019 - Gm22885 snRNA snRNA MGP_BALBcJ_T0044762.1 MGP_BALBcJ_G0022900.1 mouse_genomes_project 16 56404383 56424989 + MGP_BALBcJ_P0044762 Mina protein_coding protein_coding MGP_BALBcJ_T0044763.1 MGP_BALBcJ_G0022900.1 mouse_genomes_project 16 56404412 56410174 + MGP_BALBcJ_P0044763 Mina protein_coding protein_coding MGP_BALBcJ_T0044764.1 MGP_BALBcJ_G0022900.1 mouse_genomes_project 16 56404430 56424196 + MGP_BALBcJ_P0044764 Mina protein_coding protein_coding MGP_BALBcJ_T0044765.1 MGP_BALBcJ_G0022900.1 mouse_genomes_project 16 56404676 56424819 + MGP_BALBcJ_P0044765 Mina protein_coding protein_coding MGP_BALBcJ_T0044766.1 MGP_BALBcJ_G0022900.1 mouse_genomes_project 16 56404951 56408365 + MGP_BALBcJ_P0044766 Mina protein_coding protein_coding MGP_BALBcJ_T0044767.1 MGP_BALBcJ_G0022900.1 mouse_genomes_project 16 56420067 56422331 + Mina protein_coding retained_intron MGP_BALBcJ_T0045196.1 MGP_BALBcJ_G0023040.1 mouse_genomes_project 16 91638990 91645223 - MGP_BALBcJ_P0045196 Pigp protein_coding protein_coding MGP_BALBcJ_T0045197.1 MGP_BALBcJ_G0023040.1 mouse_genomes_project 16 91638990 91645544 - MGP_BALBcJ_P0045197 Pigp protein_coding protein_coding MGP_BALBcJ_T0045198.1 MGP_BALBcJ_G0023040.1 mouse_genomes_project 16 91638990 91645241 - MGP_BALBcJ_P0045198 Pigp protein_coding protein_coding MGP_BALBcJ_T0045199.1 MGP_BALBcJ_G0023040.1 mouse_genomes_project 16 91638990 91645544 - MGP_BALBcJ_P0045199 Pigp protein_coding protein_coding MGP_BALBcJ_T0045200.1 MGP_BALBcJ_G0023040.1 mouse_genomes_project 16 91638995 91640046 - Pigp protein_coding processed_transcript MGP_BALBcJ_T0045201.1 MGP_BALBcJ_G0023040.1 mouse_genomes_project 16 91639234 91645038 - MGP_BALBcJ_P0045201 Pigp protein_coding protein_coding MGP_BALBcJ_T0013117.1 MGP_BALBcJ_G0011214.1 mouse_genomes_project 16 18955514 18956015 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043238.1 MGP_BALBcJ_G0022512.1 mouse_genomes_project 16 11091825 11098983 + MGP_BALBcJ_P0043238 Gm1758 protein_coding protein_coding MGP_BALBcJ_T0045004.1 MGP_BALBcJ_G0022999.1 mouse_genomes_project 16 87960033 88019108 - MGP_BALBcJ_P0045004 Urb1 protein_coding protein_coding MGP_BALBcJ_T0045005.1 MGP_BALBcJ_G0022999.1 mouse_genomes_project 16 87975557 87981329 - Urb1 protein_coding retained_intron MGP_BALBcJ_T0045006.1 MGP_BALBcJ_G0022999.1 mouse_genomes_project 16 87991680 88019108 - Urb1 protein_coding retained_intron MGP_BALBcJ_T0045007.1 MGP_BALBcJ_G0022999.1 mouse_genomes_project 16 88008668 88019097 - Urb1 protein_coding retained_intron MGP_BALBcJ_T0045008.1 MGP_BALBcJ_G0022999.1 mouse_genomes_project 16 88013448 88019129 - Urb1 protein_coding retained_intron MGP_BALBcJ_T0000951.1 MGP_BALBcJ_G0000881.1 mouse_genomes_project 16 40089103 40089450 - TEC TEC MGP_BALBcJ_T0042852.1 MGP_BALBcJ_G0022420.1 mouse_genomes_project 16 333796 368708 + MGP_BALBcJ_P0042852 Gm20695 protein_coding protein_coding MGP_BALBcJ_T0042862.1 MGP_BALBcJ_G0022420.1 mouse_genomes_project 16 346988 368677 + Gm20695 protein_coding processed_transcript MGP_BALBcJ_T0010141.1 MGP_BALBcJ_G0008266.1 mouse_genomes_project 16 81860628 81860693 + Mir155 miRNA miRNA MGP_BALBcJ_T0042966.1 MGP_BALBcJ_G0022441.1 mouse_genomes_project 16 1356510 1362038 - MGP_BALBcJ_P0042966 Ubald1 protein_coding protein_coding MGP_BALBcJ_T0042967.1 MGP_BALBcJ_G0022441.1 mouse_genomes_project 16 1356520 1361538 - Ubald1 protein_coding retained_intron MGP_BALBcJ_T0098528.1 MGP_BALBcJ_G0036582.1 mouse_genomes_project 16 29785662 29785781 + n-R5s33 rRNA rRNA MGP_BALBcJ_T0044500.1 MGP_BALBcJ_G0022813.1 mouse_genomes_project 16 41899348 41900124 + Ccdc80 protein_coding processed_transcript MGP_BALBcJ_T0044501.1 MGP_BALBcJ_G0022813.1 mouse_genomes_project 16 41899400 41900833 + Ccdc80 protein_coding processed_transcript MGP_BALBcJ_T0044502.1 MGP_BALBcJ_G0022813.1 mouse_genomes_project 16 41899536 41900289 + Ccdc80 protein_coding processed_transcript MGP_BALBcJ_T0044503.1 MGP_BALBcJ_G0022813.1 mouse_genomes_project 16 41899558 41934438 + MGP_BALBcJ_P0044503 Ccdc80 protein_coding protein_coding MGP_BALBcJ_T0044504.1 MGP_BALBcJ_G0022813.1 mouse_genomes_project 16 41899621 41901099 + Ccdc80 protein_coding processed_transcript MGP_BALBcJ_T0044505.1 MGP_BALBcJ_G0022813.1 mouse_genomes_project 16 41899981 41934697 + MGP_BALBcJ_P0044505 Ccdc80 protein_coding protein_coding MGP_BALBcJ_T0043486.1 MGP_BALBcJ_G0022564.1 mouse_genomes_project 16 14566503 14573000 + MGP_BALBcJ_P0043486 protein_coding protein_coding MGP_BALBcJ_T0000042.1 MGP_BALBcJ_G0000034.1 mouse_genomes_project 16 15684010 15684048 - MGP_BALBcJ_P0000042 Iglj3 IG_J_gene IG_J_gene MGP_BALBcJ_T0017458.1 MGP_BALBcJ_G0015257.1 mouse_genomes_project 16 39509009 39639278 - 4932412D23Rik processed_transcript processed_transcript MGP_BALBcJ_T0017459.1 MGP_BALBcJ_G0015257.1 mouse_genomes_project 16 39576511 39639453 - 4932412D23Rik processed_transcript processed_transcript MGP_BALBcJ_T0017460.1 MGP_BALBcJ_G0015257.1 mouse_genomes_project 16 39576872 39639431 - 4932412D23Rik processed_transcript processed_transcript MGP_BALBcJ_T0017461.1 MGP_BALBcJ_G0015257.1 mouse_genomes_project 16 39577024 39639437 - 4932412D23Rik processed_transcript processed_transcript MGP_BALBcJ_T0099511.1 MGP_BALBcJ_G0037547.1 mouse_genomes_project 16 14950432 14950580 + Gm26170 snRNA snRNA MGP_BALBcJ_T0100811.1 MGP_BALBcJ_G0038847.1 mouse_genomes_project 16 68682130 68682261 + Gm22797 snoRNA snoRNA MGP_BALBcJ_T0006834.1 MGP_BALBcJ_G0005632.1 mouse_genomes_project 16 46617313 46621655 + Gm16619 lincRNA lincRNA MGP_BALBcJ_T0044943.1 MGP_BALBcJ_G0022962.1 mouse_genomes_project 16 85953414 85954360 + MGP_BALBcJ_P0044943 2310034C09Rik protein_coding protein_coding MGP_BALBcJ_T0010109.1 MGP_BALBcJ_G0008234.1 mouse_genomes_project 16 19267318 19267447 - Mir8095 miRNA miRNA MGP_BALBcJ_T0044749.1 MGP_BALBcJ_G0022887.1 mouse_genomes_project 16 55994911 56007264 - MGP_BALBcJ_P0044749 protein_coding protein_coding MGP_BALBcJ_T0043021.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5030025 5146914 + MGP_BALBcJ_P0043021 Abat protein_coding protein_coding MGP_BALBcJ_T0043022.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5030077 5128252 + MGP_BALBcJ_P0043022 Abat protein_coding protein_coding MGP_BALBcJ_T0043023.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5030079 5104976 + Abat protein_coding retained_intron MGP_BALBcJ_T0043024.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5030081 5144916 + MGP_BALBcJ_P0043024 Abat protein_coding protein_coding MGP_BALBcJ_T0043025.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5097185 5130913 + MGP_BALBcJ_P0043025 Abat protein_coding protein_coding MGP_BALBcJ_T0043026.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5107670 5128252 + MGP_BALBcJ_P0043026 Abat protein_coding protein_coding MGP_BALBcJ_T0043027.1 MGP_BALBcJ_G0022460.1 mouse_genomes_project 16 5138200 5143923 + Abat protein_coding processed_transcript MGP_BALBcJ_T0013114.1 MGP_BALBcJ_G0011211.1 mouse_genomes_project 16 17297441 17297933 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013112.1 MGP_BALBcJ_G0011209.1 mouse_genomes_project 16 16355413 16356080 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043275.1 MGP_BALBcJ_G0022525.1 mouse_genomes_project 16 13237489 13238631 - MGP_BALBcJ_P0043275 Olfr19 protein_coding protein_coding MGP_BALBcJ_T0043276.1 MGP_BALBcJ_G0022525.1 mouse_genomes_project 16 13237948 13241019 - MGP_BALBcJ_P0043276 Olfr19 protein_coding protein_coding MGP_BALBcJ_T0006858.1 MGP_BALBcJ_G0005647.1 mouse_genomes_project 16 88524436 88532929 - Gm15966 lincRNA lincRNA MGP_BALBcJ_T0006859.1 MGP_BALBcJ_G0005647.1 mouse_genomes_project 16 88524661 88529694 - Gm15966 lincRNA lincRNA MGP_BALBcJ_T0044646.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911843 52913576 + Senp7 protein_coding processed_transcript MGP_BALBcJ_T0044647.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911848 52959885 + MGP_BALBcJ_P0044647 Senp7 protein_coding protein_coding MGP_BALBcJ_T0044648.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911848 53025510 + MGP_BALBcJ_P0044648 Senp7 protein_coding protein_coding MGP_BALBcJ_T0044649.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911903 52959880 + Senp7 protein_coding processed_transcript MGP_BALBcJ_T0044650.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911907 53025511 + MGP_BALBcJ_P0044650 Senp7 protein_coding protein_coding MGP_BALBcJ_T0044651.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911914 52935428 + Senp7 protein_coding retained_intron MGP_BALBcJ_T0044652.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911914 52972305 + MGP_BALBcJ_P0044652 Senp7 protein_coding protein_coding MGP_BALBcJ_T0044653.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911919 52959761 + Senp7 protein_coding processed_transcript MGP_BALBcJ_T0044654.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 52911919 52975159 + MGP_BALBcJ_P0044654 Senp7 protein_coding protein_coding MGP_BALBcJ_T0044655.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 53015517 53024229 + Senp7 protein_coding retained_intron MGP_BALBcJ_T0044656.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 53015991 53023838 + Senp7 protein_coding retained_intron MGP_BALBcJ_T0044657.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 53017976 53025483 + Senp7 protein_coding processed_transcript MGP_BALBcJ_T0044658.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 53019153 53023743 + Senp7 protein_coding processed_transcript MGP_BALBcJ_T0044659.1 MGP_BALBcJ_G0022854.1 mouse_genomes_project 16 53021627 53024218 + Senp7 protein_coding processed_transcript MGP_BALBcJ_T0044868.1 MGP_BALBcJ_G0022936.1 mouse_genomes_project 16 78287992 78702212 + MGP_BALBcJ_P0044868 Ncam2 protein_coding protein_coding MGP_BALBcJ_T0044869.1 MGP_BALBcJ_G0022936.1 mouse_genomes_project 16 78287992 78731772 + MGP_BALBcJ_P0044869 Ncam2 protein_coding protein_coding MGP_BALBcJ_T0044440.1 MGP_BALBcJ_G0022800.1 mouse_genomes_project 16 40874266 40927901 - MGP_BALBcJ_P0044440 Atp6v1a protein_coding protein_coding MGP_BALBcJ_T0044441.1 MGP_BALBcJ_G0022800.1 mouse_genomes_project 16 40874509 40927792 - MGP_BALBcJ_P0044441 Atp6v1a protein_coding protein_coding MGP_BALBcJ_T0044442.1 MGP_BALBcJ_G0022800.1 mouse_genomes_project 16 40886029 40927576 - Atp6v1a protein_coding retained_intron MGP_BALBcJ_T0044443.1 MGP_BALBcJ_G0022800.1 mouse_genomes_project 16 40898329 40928226 - MGP_BALBcJ_P0044443 Atp6v1a protein_coding protein_coding MGP_BALBcJ_T0044444.1 MGP_BALBcJ_G0022800.1 mouse_genomes_project 16 40898452 40927614 - MGP_BALBcJ_P0044444 Atp6v1a protein_coding protein_coding MGP_BALBcJ_T0044445.1 MGP_BALBcJ_G0022800.1 mouse_genomes_project 16 40900522 40928301 - MGP_BALBcJ_P0044445 Atp6v1a protein_coding protein_coding MGP_BALBcJ_T0044197.1 MGP_BALBcJ_G0022738.1 mouse_genomes_project 16 32579277 32640628 + MGP_BALBcJ_P0044197 Hspbap1 protein_coding protein_coding MGP_BALBcJ_T0044938.1 MGP_BALBcJ_G0022957.1 mouse_genomes_project 16 85837614 85838587 - MGP_BALBcJ_P0044938 Krtap26-1 protein_coding protein_coding MGP_BALBcJ_T0044955.1 MGP_BALBcJ_G0022972.1 mouse_genomes_project 16 86115318 86115486 - MGP_BALBcJ_P0044955 Krtap19-9a protein_coding protein_coding MGP_BALBcJ_T0043717.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17301631 17312206 + MGP_BALBcJ_P0043717 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043718.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17301633 17311736 + MGP_BALBcJ_P0043718 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043719.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305533 17326203 + MGP_BALBcJ_P0043719 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043720.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305556 17326202 + MGP_BALBcJ_P0043720 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043721.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305559 17317075 + MGP_BALBcJ_P0043721 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043722.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305559 17326200 + MGP_BALBcJ_P0043722 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043723.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305565 17326202 + MGP_BALBcJ_P0043723 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043724.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305580 17317081 + MGP_BALBcJ_P0043724 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043725.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305581 17317081 + MGP_BALBcJ_P0043725 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043726.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305633 17312082 + MGP_BALBcJ_P0043726 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043727.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17305633 17326203 + MGP_BALBcJ_P0043727 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043728.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306105 17326203 + MGP_BALBcJ_P0043728 Eif4g1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043729.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306208 17310609 + MGP_BALBcJ_P0043729 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043730.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306230 17326202 + MGP_BALBcJ_P0043730 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043731.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306249 17311474 + MGP_BALBcJ_P0043731 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043732.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306327 17326200 + MGP_BALBcJ_P0043732 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043733.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306624 17311470 + MGP_BALBcJ_P0043733 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043734.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17306921 17311485 + MGP_BALBcJ_P0043734 Eif4g1 protein_coding protein_coding MGP_BALBcJ_T0043735.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17311086 17326200 + Eif4g1 protein_coding retained_intron MGP_BALBcJ_T0043736.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17311216 17312396 + Eif4g1 protein_coding processed_transcript MGP_BALBcJ_T0043737.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17314277 17314972 + Eif4g1 protein_coding retained_intron MGP_BALBcJ_T0043738.1 MGP_BALBcJ_G0022617.1 mouse_genomes_project 16 17322287 17322973 + Eif4g1 protein_coding retained_intron MGP_BALBcJ_T0003659.1 MGP_BALBcJ_G0003310.1 mouse_genomes_project 16 33664890 33681594 - 4930565N06Rik antisense antisense MGP_BALBcJ_T0017449.1 MGP_BALBcJ_G0015251.1 mouse_genomes_project 16 15014663 15020176 + Gm15764 processed_transcript antisense MGP_BALBcJ_T0017450.1 MGP_BALBcJ_G0015251.1 mouse_genomes_project 16 15014866 15019545 + Gm15764 processed_transcript retained_intron MGP_BALBcJ_T0098713.1 MGP_BALBcJ_G0036767.1 mouse_genomes_project 16 29922887 29923286 - Gm23916 ribozyme ribozyme MGP_BALBcJ_T0043063.1 MGP_BALBcJ_G0022471.1 mouse_genomes_project 16 6894489 6935410 - MGP_BALBcJ_P0043063 Tekt5 protein_coding protein_coding MGP_BALBcJ_T0043064.1 MGP_BALBcJ_G0022471.1 mouse_genomes_project 16 6897715 6935368 - MGP_BALBcJ_P0043064 Tekt5 protein_coding protein_coding MGP_BALBcJ_T0044209.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32791524 32816304 + Kpna1 protein_coding retained_intron MGP_BALBcJ_T0044210.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32796370 32849888 + MGP_BALBcJ_P0044210 Kpna1 protein_coding protein_coding MGP_BALBcJ_T0044211.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32796380 32818084 + Kpna1 protein_coding retained_intron MGP_BALBcJ_T0044212.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32796409 32832493 + MGP_BALBcJ_P0044212 Kpna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044213.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32796637 32826126 + MGP_BALBcJ_P0044213 Kpna1 protein_coding protein_coding MGP_BALBcJ_T0044214.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32813184 32846665 + MGP_BALBcJ_P0044214 Kpna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044215.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32813250 32834862 + MGP_BALBcJ_P0044215 Kpna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044216.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32827009 32847888 + MGP_BALBcJ_P0044216 Kpna1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044217.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32832592 32846625 + MGP_BALBcJ_P0044217 Kpna1 protein_coding protein_coding MGP_BALBcJ_T0044218.1 MGP_BALBcJ_G0022742.1 mouse_genomes_project 16 32834860 32844531 + Kpna1 protein_coding retained_intron MGP_BALBcJ_T0043848.1 MGP_BALBcJ_G0022648.1 mouse_genomes_project 16 19995342 20000045 - MGP_BALBcJ_P0043848 BC106179 protein_coding protein_coding MGP_BALBcJ_T0043934.1 MGP_BALBcJ_G0022676.1 mouse_genomes_project 16 27028195 27039727 - MGP_BALBcJ_P0043934 Cpn2 protein_coding protein_coding MGP_BALBcJ_T0013094.1 MGP_BALBcJ_G0011191.1 mouse_genomes_project 16 8053159 8054645 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042992.1 MGP_BALBcJ_G0022449.1 mouse_genomes_project 16 1501650 1537547 - MGP_BALBcJ_P0042992 Glyr1 protein_coding protein_coding MGP_BALBcJ_T0042993.1 MGP_BALBcJ_G0022449.1 mouse_genomes_project 16 1501650 1537547 - MGP_BALBcJ_P0042993 Glyr1 protein_coding protein_coding MGP_BALBcJ_T0100780.1 MGP_BALBcJ_G0038816.1 mouse_genomes_project 16 16031933 16032065 + Gm25762 snoRNA snoRNA MGP_BALBcJ_T0043012.1 MGP_BALBcJ_G0022457.1 mouse_genomes_project 16 3333457 3942769 + MGP_BALBcJ_P0043012 Rbfox1 protein_coding protein_coding MGP_BALBcJ_T0043013.1 MGP_BALBcJ_G0022457.1 mouse_genomes_project 16 3597062 3945664 + MGP_BALBcJ_P0043013 Rbfox1 protein_coding protein_coding MGP_BALBcJ_T0043014.1 MGP_BALBcJ_G0022457.1 mouse_genomes_project 16 3751741 3945668 + MGP_BALBcJ_P0043014 Rbfox1 protein_coding unknown_likely_coding MGP_BALBcJ_T0099503.1 MGP_BALBcJ_G0037539.1 mouse_genomes_project 16 5295427 5295535 - Gm25805 snRNA snRNA MGP_BALBcJ_T0044079.1 MGP_BALBcJ_G0022712.1 mouse_genomes_project 16 29557108 29576988 - MGP_BALBcJ_P0044079 Muc20 protein_coding protein_coding MGP_BALBcJ_T0044082.1 MGP_BALBcJ_G0022712.1 mouse_genomes_project 16 29565663 29576988 - MGP_BALBcJ_P0044082 Muc20 protein_coding protein_coding MGP_BALBcJ_T0044476.1 MGP_BALBcJ_G0022807.1 mouse_genomes_project 16 41533322 41546303 + MGP_BALBcJ_P0044476 Nepro protein_coding protein_coding MGP_BALBcJ_T0044477.1 MGP_BALBcJ_G0022807.1 mouse_genomes_project 16 41533378 41540383 + MGP_BALBcJ_P0044477 Nepro protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044478.1 MGP_BALBcJ_G0022807.1 mouse_genomes_project 16 41533378 41545592 + MGP_BALBcJ_P0044478 Nepro protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044479.1 MGP_BALBcJ_G0022807.1 mouse_genomes_project 16 41535188 41543148 + Nepro protein_coding retained_intron MGP_BALBcJ_T0044480.1 MGP_BALBcJ_G0022807.1 mouse_genomes_project 16 41536140 41543745 + MGP_BALBcJ_P0044480 Nepro protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102274.1 MGP_BALBcJ_G0040090.1 mouse_genomes_project 16 55934763 55935578 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042997.1 MGP_BALBcJ_G0022453.1 mouse_genomes_project 16 1686887 1695800 - MGP_BALBcJ_P0042997 Nagpa protein_coding protein_coding MGP_BALBcJ_T0042998.1 MGP_BALBcJ_G0022453.1 mouse_genomes_project 16 1686887 1695790 - MGP_BALBcJ_P0042998 Nagpa protein_coding protein_coding MGP_BALBcJ_T0042999.1 MGP_BALBcJ_G0022453.1 mouse_genomes_project 16 1686985 1689553 - Nagpa protein_coding processed_transcript MGP_BALBcJ_T0043000.1 MGP_BALBcJ_G0022453.1 mouse_genomes_project 16 1691600 1695265 - Nagpa protein_coding retained_intron MGP_BALBcJ_T0013116.1 MGP_BALBcJ_G0011213.1 mouse_genomes_project 16 18776470 18776894 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044198.1 MGP_BALBcJ_G0022739.1 mouse_genomes_project 16 32645280 32684108 - MGP_BALBcJ_P0044198 Parp14 protein_coding protein_coding MGP_BALBcJ_T0044199.1 MGP_BALBcJ_G0022739.1 mouse_genomes_project 16 32669579 32683953 - Parp14 protein_coding retained_intron MGP_BALBcJ_T0044200.1 MGP_BALBcJ_G0022739.1 mouse_genomes_project 16 32678496 32683953 - Parp14 protein_coding retained_intron MGP_BALBcJ_T0043632.1 MGP_BALBcJ_G0022602.1 mouse_genomes_project 16 16717187 16747415 + MGP_BALBcJ_P0043632 Klhl24 protein_coding protein_coding MGP_BALBcJ_T0044229.1 MGP_BALBcJ_G0022750.1 mouse_genomes_project 16 33131942 33140643 - MGP_BALBcJ_P0044229 BC100530 protein_coding protein_coding MGP_BALBcJ_T0044231.1 MGP_BALBcJ_G0022750.1 mouse_genomes_project 16 33131945 33140443 - MGP_BALBcJ_P0044231 BC100530 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044232.1 MGP_BALBcJ_G0022750.1 mouse_genomes_project 16 33136936 33140446 - BC100530 protein_coding retained_intron MGP_BALBcJ_T0006807.1 MGP_BALBcJ_G0005609.1 mouse_genomes_project 16 10071349 10077640 - 2310015D24Rik lincRNA lincRNA MGP_BALBcJ_T0006808.1 MGP_BALBcJ_G0005609.1 mouse_genomes_project 16 10076403 10078328 - 2310015D24Rik lincRNA lincRNA MGP_BALBcJ_T0044489.1 MGP_BALBcJ_G0022811.1 mouse_genomes_project 16 41682971 41735586 + MGP_BALBcJ_P0044489 Cd200r2 protein_coding protein_coding MGP_BALBcJ_T0000952.1 MGP_BALBcJ_G0000882.1 mouse_genomes_project 16 46112066 46113483 - TEC TEC MGP_BALBcJ_T0000953.1 MGP_BALBcJ_G0000883.1 mouse_genomes_project 16 54738009 54738419 + TEC TEC MGP_BALBcJ_T0045162.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90848640 90870587 - MGP_BALBcJ_P0045162 Setd4 protein_coding unknown_likely_coding MGP_BALBcJ_T0045163.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90848642 90870337 - Setd4 protein_coding retained_intron MGP_BALBcJ_T0045164.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90848643 90853513 - Setd4 protein_coding processed_transcript MGP_BALBcJ_T0045165.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90848645 90854730 - Setd4 protein_coding retained_intron MGP_BALBcJ_T0045166.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90856604 90863460 - Setd4 protein_coding processed_transcript MGP_BALBcJ_T0045167.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90856736 90870610 - Setd4 protein_coding processed_transcript MGP_BALBcJ_T0045168.1 MGP_BALBcJ_G0023030.1 mouse_genomes_project 16 90867671 90870361 - Setd4 protein_coding processed_transcript MGP_BALBcJ_T0099521.1 MGP_BALBcJ_G0037557.1 mouse_genomes_project 16 32198221 32198374 - Gm23518 snRNA snRNA MGP_BALBcJ_T0044603.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47021347 47262019 - MGP_BALBcJ_P0044603 Bbx protein_coding protein_coding MGP_BALBcJ_T0044604.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47025283 47261969 - MGP_BALBcJ_P0044604 Bbx protein_coding protein_coding MGP_BALBcJ_T0044605.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47026119 47262018 - MGP_BALBcJ_P0044605 Bbx protein_coding protein_coding MGP_BALBcJ_T0044606.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47026634 47163424 - MGP_BALBcJ_P0044606 Bbx protein_coding protein_coding MGP_BALBcJ_T0044607.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47039953 47262003 - MGP_BALBcJ_P0044607 Bbx protein_coding protein_coding MGP_BALBcJ_T0044608.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47048031 47262018 - MGP_BALBcJ_P0044608 Bbx protein_coding protein_coding MGP_BALBcJ_T0044609.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47054294 47259793 - Bbx protein_coding processed_transcript MGP_BALBcJ_T0044610.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47255841 47261938 - Bbx protein_coding retained_intron MGP_BALBcJ_T0044611.1 MGP_BALBcJ_G0022842.1 mouse_genomes_project 16 47257261 47261976 - Bbx protein_coding processed_transcript MGP_BALBcJ_T0013166.1 MGP_BALBcJ_G0011263.1 mouse_genomes_project 16 72849928 72850841 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013103.1 MGP_BALBcJ_G0011200.1 mouse_genomes_project 16 13411829 13412079 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100823.1 MGP_BALBcJ_G0038859.1 mouse_genomes_project 16 87807588 87807710 + Gm23406 snoRNA snoRNA MGP_BALBcJ_T0099538.1 MGP_BALBcJ_G0037574.1 mouse_genomes_project 16 47753095 47753202 - Gm24925 snRNA snRNA MGP_BALBcJ_T0010103.1 MGP_BALBcJ_G0008228.1 mouse_genomes_project 16 14921924 14921989 - Mir185 miRNA miRNA MGP_BALBcJ_T0043478.1 MGP_BALBcJ_G0022561.1 mouse_genomes_project 16 14489520 14502241 - MGP_BALBcJ_P0043478 Dgcr14 protein_coding protein_coding MGP_BALBcJ_T0006820.1 MGP_BALBcJ_G0005619.1 mouse_genomes_project 16 26579043 26606747 + Gm26834 lincRNA lincRNA MGP_BALBcJ_T0099539.1 MGP_BALBcJ_G0037575.1 mouse_genomes_project 16 51795657 51795764 + Gm22977 snRNA snRNA MGP_BALBcJ_T0013139.1 MGP_BALBcJ_G0011236.1 mouse_genomes_project 16 39738057 39738376 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043960.1 MGP_BALBcJ_G0022683.1 mouse_genomes_project 16 27741125 27867716 - MGP_BALBcJ_P0043960 Xxylt1 protein_coding protein_coding MGP_BALBcJ_T0043961.1 MGP_BALBcJ_G0022683.1 mouse_genomes_project 16 27742959 27847085 - Xxylt1 protein_coding processed_transcript MGP_BALBcJ_T0043962.1 MGP_BALBcJ_G0022683.1 mouse_genomes_project 16 27794084 27855485 - Xxylt1 protein_coding processed_transcript MGP_BALBcJ_T0043963.1 MGP_BALBcJ_G0022683.1 mouse_genomes_project 16 27794126 27853485 - Xxylt1 protein_coding processed_transcript MGP_BALBcJ_T0013140.1 MGP_BALBcJ_G0011237.1 mouse_genomes_project 16 39969401 39970557 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044450.1 MGP_BALBcJ_G0022802.1 mouse_genomes_project 16 40961606 41015764 + MGP_BALBcJ_P0044450 Usf3 protein_coding protein_coding MGP_BALBcJ_T0044451.1 MGP_BALBcJ_G0022802.1 mouse_genomes_project 16 40961936 41015762 + MGP_BALBcJ_P0044451 Usf3 protein_coding protein_coding MGP_BALBcJ_T0100775.1 MGP_BALBcJ_G0038811.1 mouse_genomes_project 16 4916842 4916986 + Gm24579 snoRNA snoRNA MGP_BALBcJ_T0042908.1 MGP_BALBcJ_G0022429.1 mouse_genomes_project 16 758980 789313 - MGP_BALBcJ_P0042908 Adcy9 protein_coding unknown_likely_coding MGP_BALBcJ_T0042909.1 MGP_BALBcJ_G0022429.1 mouse_genomes_project 16 761629 887483 - MGP_BALBcJ_P0042909 Adcy9 protein_coding protein_coding MGP_BALBcJ_T0042910.1 MGP_BALBcJ_G0022429.1 mouse_genomes_project 16 761629 886793 - MGP_BALBcJ_P0042910 Adcy9 protein_coding protein_coding MGP_BALBcJ_T0042911.1 MGP_BALBcJ_G0022429.1 mouse_genomes_project 16 761645 886572 - MGP_BALBcJ_P0042911 Adcy9 protein_coding protein_coding MGP_BALBcJ_T0010088.1 MGP_BALBcJ_G0008213.1 mouse_genomes_project 16 1707627 1707713 - Mir6364 miRNA miRNA MGP_BALBcJ_T0100796.1 MGP_BALBcJ_G0038832.1 mouse_genomes_project 16 35014168 35014297 - Gm27931 snoRNA snoRNA MGP_BALBcJ_T0013115.1 MGP_BALBcJ_G0011212.1 mouse_genomes_project 16 17751216 17752913 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044944.1 MGP_BALBcJ_G0022963.1 mouse_genomes_project 16 85968023 85968824 - MGP_BALBcJ_P0044944 2310057N15Rik protein_coding protein_coding MGP_BALBcJ_T0006843.1 MGP_BALBcJ_G0005637.1 mouse_genomes_project 16 54007984 54014771 + Gm16892 lincRNA lincRNA MGP_BALBcJ_T0043861.1 MGP_BALBcJ_G0022655.1 mouse_genomes_project 16 20749510 20773346 - MGP_BALBcJ_P0043861 Bcl6 protein_coding protein_coding MGP_BALBcJ_T0043862.1 MGP_BALBcJ_G0022655.1 mouse_genomes_project 16 20752152 20756843 - Bcl6 protein_coding retained_intron MGP_BALBcJ_T0043883.1 MGP_BALBcJ_G0022662.1 mouse_genomes_project 16 23301854 23323393 - MGP_BALBcJ_P0043883 Tmem207 protein_coding protein_coding MGP_BALBcJ_T0043759.1 MGP_BALBcJ_G0022623.1 mouse_genomes_project 16 17579126 17580745 + MGP_BALBcJ_P0043759 Teddm3 protein_coding protein_coding MGP_BALBcJ_T0043764.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130202 18359339 + MGP_BALBcJ_P0043764 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043765.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130202 18359339 + MGP_BALBcJ_P0043765 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043766.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130202 18287462 + MGP_BALBcJ_P0043766 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043767.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130253 18359339 + MGP_BALBcJ_P0043767 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043768.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130280 18253194 + MGP_BALBcJ_P0043768 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043769.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130285 18359331 + MGP_BALBcJ_P0043769 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043770.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18130356 18142058 + MGP_BALBcJ_P0043770 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043771.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18175802 18356231 + MGP_BALBcJ_P0043771 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043772.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18215429 18359334 + MGP_BALBcJ_P0043772 Vps8 protein_coding protein_coding MGP_BALBcJ_T0043773.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18234262 18239962 + Vps8 protein_coding retained_intron MGP_BALBcJ_T0043774.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18234332 18267367 + MGP_BALBcJ_P0043774 Vps8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043775.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18276578 18289913 + Vps8 protein_coding retained_intron MGP_BALBcJ_T0043776.1 MGP_BALBcJ_G0022625.1 mouse_genomes_project 16 18341097 18359075 + Vps8 protein_coding processed_transcript MGP_BALBcJ_T0098529.1 MGP_BALBcJ_G0036583.1 mouse_genomes_project 16 34660512 34660628 + n-R5s34 rRNA rRNA MGP_BALBcJ_T0044753.1 MGP_BALBcJ_G0022891.1 mouse_genomes_project 16 56106217 56180029 - MGP_BALBcJ_P0044753 Olfr198 protein_coding protein_coding MGP_BALBcJ_T0003630.1 MGP_BALBcJ_G0003287.1 mouse_genomes_project 16 1495551 1501163 + Gm42477 antisense antisense MGP_BALBcJ_T0100805.1 MGP_BALBcJ_G0038841.1 mouse_genomes_project 16 52869907 52870042 - Gm22422 snoRNA snoRNA MGP_BALBcJ_T0043863.1 MGP_BALBcJ_G0022656.1 mouse_genomes_project 16 21192272 21791148 + MGP_BALBcJ_P0043863 Lpp protein_coding protein_coding MGP_BALBcJ_T0043864.1 MGP_BALBcJ_G0022656.1 mouse_genomes_project 16 21246953 21791148 + MGP_BALBcJ_P0043864 Lpp protein_coding protein_coding MGP_BALBcJ_T0043865.1 MGP_BALBcJ_G0022656.1 mouse_genomes_project 16 21520305 21791148 + MGP_BALBcJ_P0043865 Lpp protein_coding protein_coding MGP_BALBcJ_T0043338.1 MGP_BALBcJ_G0022535.1 mouse_genomes_project 16 13703707 13711873 - MGP_BALBcJ_P0043338 Ccdc116 protein_coding protein_coding MGP_BALBcJ_T0043339.1 MGP_BALBcJ_G0022535.1 mouse_genomes_project 16 13703876 13708726 - MGP_BALBcJ_P0043339 Ccdc116 protein_coding unknown_likely_coding MGP_BALBcJ_T0043340.1 MGP_BALBcJ_G0022535.1 mouse_genomes_project 16 13705679 13708853 - MGP_BALBcJ_P0043340 Ccdc116 protein_coding protein_coding MGP_BALBcJ_T0043341.1 MGP_BALBcJ_G0022535.1 mouse_genomes_project 16 13705680 13709067 - MGP_BALBcJ_P0043341 Ccdc116 protein_coding protein_coding MGP_BALBcJ_T0043342.1 MGP_BALBcJ_G0022535.1 mouse_genomes_project 16 13707364 13709082 - Ccdc116 protein_coding processed_transcript MGP_BALBcJ_T0043524.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14895150 14918974 - MGP_BALBcJ_P0043524 Tango2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043525.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14895152 14938457 - MGP_BALBcJ_P0043525 Tango2 protein_coding protein_coding MGP_BALBcJ_T0043526.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14895548 14898471 - Tango2 protein_coding retained_intron MGP_BALBcJ_T0043527.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14902312 14905779 - Tango2 protein_coding processed_transcript MGP_BALBcJ_T0043528.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14905105 14907360 - Tango2 protein_coding retained_intron MGP_BALBcJ_T0043529.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14905213 14942920 - MGP_BALBcJ_P0043529 Tango2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043530.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14905221 14938432 - MGP_BALBcJ_P0043530 Tango2 protein_coding protein_coding MGP_BALBcJ_T0043531.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14906750 14918975 - Tango2 protein_coding retained_intron MGP_BALBcJ_T0043532.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14910829 14918975 - Tango2 protein_coding retained_intron MGP_BALBcJ_T0043533.1 MGP_BALBcJ_G0022574.1 mouse_genomes_project 16 14915374 14942900 - Tango2 protein_coding retained_intron MGP_BALBcJ_T0044019.1 MGP_BALBcJ_G0022696.1 mouse_genomes_project 16 28882147 28890438 + MGP_BALBcJ_P0044019 Cep19 protein_coding protein_coding MGP_BALBcJ_T0044020.1 MGP_BALBcJ_G0022696.1 mouse_genomes_project 16 28882299 28890420 + MGP_BALBcJ_P0044020 Cep19 protein_coding protein_coding MGP_BALBcJ_T0044021.1 MGP_BALBcJ_G0022696.1 mouse_genomes_project 16 28886246 28890424 + MGP_BALBcJ_P0044021 Cep19 protein_coding protein_coding MGP_BALBcJ_T0017482.1 MGP_BALBcJ_G0015263.1 mouse_genomes_project 16 84674516 84682416 + B130034C11Rik processed_transcript retained_intron MGP_BALBcJ_T0017483.1 MGP_BALBcJ_G0015263.1 mouse_genomes_project 16 84674590 84682621 + B130034C11Rik processed_transcript processed_transcript MGP_BALBcJ_T0044725.1 MGP_BALBcJ_G0022876.1 mouse_genomes_project 16 55593122 55594286 - MGP_BALBcJ_P0044725 Olfr173 protein_coding protein_coding MGP_BALBcJ_T0044726.1 MGP_BALBcJ_G0022876.1 mouse_genomes_project 16 55593792 55600415 - MGP_BALBcJ_P0044726 Olfr173 protein_coding protein_coding MGP_BALBcJ_T0043246.1 MGP_BALBcJ_G0022518.1 mouse_genomes_project 16 12191056 12250138 + Prkdc protein_coding retained_intron MGP_BALBcJ_T0043247.1 MGP_BALBcJ_G0022518.1 mouse_genomes_project 16 12191079 12403880 + MGP_BALBcJ_P0043247 Prkdc protein_coding protein_coding MGP_BALBcJ_T0013107.1 MGP_BALBcJ_G0011204.1 mouse_genomes_project 16 15563732 15564140 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043078.1 MGP_BALBcJ_G0022475.1 mouse_genomes_project 16 7040936 7083452 - MGP_BALBcJ_P0043078 Dexi protein_coding protein_coding MGP_BALBcJ_T0043079.1 MGP_BALBcJ_G0022475.1 mouse_genomes_project 16 7070626 7072229 - Dexi protein_coding processed_transcript MGP_BALBcJ_T0043080.1 MGP_BALBcJ_G0022475.1 mouse_genomes_project 16 7070626 7083452 - MGP_BALBcJ_P0043080 Dexi protein_coding protein_coding MGP_BALBcJ_T0003676.1 MGP_BALBcJ_G0003322.1 mouse_genomes_project 16 88194002 88197216 + Gm15965 antisense antisense MGP_BALBcJ_T0101641.1 MGP_BALBcJ_G0039645.1 mouse_genomes_project 16 34688462 34689552 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0102264.1 MGP_BALBcJ_G0040080.1 mouse_genomes_project 16 52484 54008 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0042884.1 MGP_BALBcJ_G0022425.1 mouse_genomes_project 16 468038 468405 - MGP_BALBcJ_P0042884 Gm10076 protein_coding protein_coding MGP_BALBcJ_T0044283.1 MGP_BALBcJ_G0022762.1 mouse_genomes_project 16 33719363 33747713 + MGP_BALBcJ_P0044283 Hcls1 protein_coding protein_coding MGP_BALBcJ_T0044284.1 MGP_BALBcJ_G0022762.1 mouse_genomes_project 16 33721667 33746031 + MGP_BALBcJ_P0044284 Hcls1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044285.1 MGP_BALBcJ_G0022762.1 mouse_genomes_project 16 33739278 33741161 + Hcls1 protein_coding retained_intron MGP_BALBcJ_T0011395.1 MGP_BALBcJ_G0009520.1 mouse_genomes_project 16 81754898 81755220 - Gm25292 misc_RNA misc_RNA MGP_BALBcJ_T0043016.1 MGP_BALBcJ_G0022459.1 mouse_genomes_project 16 4990703 5010151 + MGP_BALBcJ_P0043016 Mettl22 protein_coding protein_coding MGP_BALBcJ_T0043017.1 MGP_BALBcJ_G0022459.1 mouse_genomes_project 16 4990706 5008149 + MGP_BALBcJ_P0043017 Mettl22 protein_coding protein_coding MGP_BALBcJ_T0043018.1 MGP_BALBcJ_G0022459.1 mouse_genomes_project 16 4990719 5003798 + MGP_BALBcJ_P0043018 Mettl22 protein_coding protein_coding MGP_BALBcJ_T0043019.1 MGP_BALBcJ_G0022459.1 mouse_genomes_project 16 5005032 5008310 + Mettl22 protein_coding retained_intron MGP_BALBcJ_T0043020.1 MGP_BALBcJ_G0022459.1 mouse_genomes_project 16 5006300 5009663 + Mettl22 protein_coding retained_intron MGP_BALBcJ_T0006835.1 MGP_BALBcJ_G0005633.1 mouse_genomes_project 16 47356721 47389056 + G730013B05Rik lincRNA lincRNA MGP_BALBcJ_T0044758.1 MGP_BALBcJ_G0022896.1 mouse_genomes_project 16 56250419 56253444 - MGP_BALBcJ_P0044758 Olfr205 protein_coding protein_coding MGP_BALBcJ_T0011385.1 MGP_BALBcJ_G0009510.1 mouse_genomes_project 16 19330145 19330337 + Gm22481 misc_RNA misc_RNA MGP_BALBcJ_T0044154.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30781687 30895306 - MGP_BALBcJ_P0044154 protein_coding protein_coding MGP_BALBcJ_T0044155.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30782592 30786156 - protein_coding retained_intron MGP_BALBcJ_T0044156.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30782924 31259719 - MGP_BALBcJ_P0044156 protein_coding protein_coding MGP_BALBcJ_T0044157.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30819712 30963082 - MGP_BALBcJ_P0044157 protein_coding protein_coding MGP_BALBcJ_T0044158.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30819717 30896409 - MGP_BALBcJ_P0044158 protein_coding protein_coding MGP_BALBcJ_T0044159.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30819717 31195661 - MGP_BALBcJ_P0044159 protein_coding protein_coding MGP_BALBcJ_T0044160.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30819726 30895347 - MGP_BALBcJ_P0044160 protein_coding protein_coding MGP_BALBcJ_T0044161.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30820247 30895199 - MGP_BALBcJ_P0044161 protein_coding unknown_likely_coding MGP_BALBcJ_T0044162.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30848783 31378329 - MGP_BALBcJ_P0044162 protein_coding protein_coding MGP_BALBcJ_T0044163.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30951826 31317628 - MGP_BALBcJ_P0044163 protein_coding protein_coding MGP_BALBcJ_T0044164.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30951827 31065085 - MGP_BALBcJ_P0044164 protein_coding protein_coding MGP_BALBcJ_T0044165.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30951837 31317666 - MGP_BALBcJ_P0044165 protein_coding protein_coding MGP_BALBcJ_T0044166.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30951897 31064850 - MGP_BALBcJ_P0044166 protein_coding protein_coding MGP_BALBcJ_T0044167.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30953202 31065078 - MGP_BALBcJ_P0044167 protein_coding protein_coding MGP_BALBcJ_T0044168.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30953269 31317524 - MGP_BALBcJ_P0044168 protein_coding protein_coding MGP_BALBcJ_T0044169.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 30977786 31064724 - MGP_BALBcJ_P0044169 protein_coding protein_coding MGP_BALBcJ_T0044170.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 31020647 31064795 - protein_coding retained_intron MGP_BALBcJ_T0044171.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 31046002 31054200 - protein_coding processed_transcript MGP_BALBcJ_T0044172.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 31158702 31165543 - protein_coding processed_transcript MGP_BALBcJ_T0044173.1 MGP_BALBcJ_G0022728.1 mouse_genomes_project 16 31316338 31317695 - protein_coding processed_transcript MGP_BALBcJ_T0006860.1 MGP_BALBcJ_G0005648.1 mouse_genomes_project 16 90640257 90690689 - 1700029J03Rik lincRNA lincRNA MGP_BALBcJ_T0006861.1 MGP_BALBcJ_G0005648.1 mouse_genomes_project 16 90645320 90723355 - 1700029J03Rik lincRNA lincRNA MGP_BALBcJ_T0044934.1 MGP_BALBcJ_G0022953.1 mouse_genomes_project 16 85696984 85698156 - MGP_BALBcJ_P0044934 Cldn17 protein_coding protein_coding MGP_BALBcJ_T0099502.1 MGP_BALBcJ_G0037538.1 mouse_genomes_project 16 4838531 4838635 + Gm26159 snRNA snRNA MGP_BALBcJ_T0044529.1 MGP_BALBcJ_G0022818.1 mouse_genomes_project 16 42251342 42298803 - Gm609 protein_coding processed_transcript MGP_BALBcJ_T0044530.1 MGP_BALBcJ_G0022818.1 mouse_genomes_project 16 42257503 42327896 - MGP_BALBcJ_P0044530 Gm609 protein_coding protein_coding MGP_BALBcJ_T0043935.1 MGP_BALBcJ_G0022677.1 mouse_genomes_project 16 27041488 27055443 - MGP_BALBcJ_P0043935 Lrrc15 protein_coding protein_coding MGP_BALBcJ_T0044964.1 MGP_BALBcJ_G0022981.1 mouse_genomes_project 16 86279679 86280199 + MGP_BALBcJ_P0044964 Krtap6-3 protein_coding protein_coding MGP_BALBcJ_T0044965.1 MGP_BALBcJ_G0022981.1 mouse_genomes_project 16 86279755 86280199 + MGP_BALBcJ_P0044965 Krtap6-3 protein_coding protein_coding MGP_BALBcJ_T0044262.1 MGP_BALBcJ_G0022759.1 mouse_genomes_project 16 33575833 33659349 - Eaf2 protein_coding processed_transcript MGP_BALBcJ_T0044263.1 MGP_BALBcJ_G0022759.1 mouse_genomes_project 16 33575834 33659349 - Eaf2 protein_coding processed_transcript MGP_BALBcJ_T0044264.1 MGP_BALBcJ_G0022759.1 mouse_genomes_project 16 33575835 33591065 - MGP_BALBcJ_P0044264 Eaf2 protein_coding protein_coding MGP_BALBcJ_T0044265.1 MGP_BALBcJ_G0022759.1 mouse_genomes_project 16 33575914 33611402 - Eaf2 protein_coding processed_transcript MGP_BALBcJ_T0044266.1 MGP_BALBcJ_G0022759.1 mouse_genomes_project 16 33575969 33611347 - MGP_BALBcJ_P0044266 Eaf2 protein_coding protein_coding MGP_BALBcJ_T0044267.1 MGP_BALBcJ_G0022759.1 mouse_genomes_project 16 33605385 33659160 - Eaf2 protein_coding retained_intron MGP_BALBcJ_T0044382.1 MGP_BALBcJ_G0022788.1 mouse_genomes_project 16 35583530 35613022 - MGP_BALBcJ_P0044382 Upk1b protein_coding protein_coding MGP_BALBcJ_T0044353.1 MGP_BALBcJ_G0022783.1 mouse_genomes_project 16 35314876 35339030 - MGP_BALBcJ_P0044353 Timmdc1 protein_coding protein_coding MGP_BALBcJ_T0044354.1 MGP_BALBcJ_G0022783.1 mouse_genomes_project 16 35333026 35339008 - Timmdc1 protein_coding processed_transcript MGP_BALBcJ_T0013157.1 MGP_BALBcJ_G0011254.1 mouse_genomes_project 16 53752871 53753814 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102272.1 MGP_BALBcJ_G0040088.1 mouse_genomes_project 16 55883679 55885574 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013081.1 MGP_BALBcJ_G0011178.1 mouse_genomes_project 16 169636 170161 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100808.1 MGP_BALBcJ_G0038844.1 mouse_genomes_project 16 58016867 58016944 + Gm23852 snoRNA snoRNA MGP_BALBcJ_T0006844.1 MGP_BALBcJ_G0005638.1 mouse_genomes_project 16 54115738 54116345 + Gm26800 lincRNA lincRNA MGP_BALBcJ_T0044892.1 MGP_BALBcJ_G0022941.1 mouse_genomes_project 16 82102185 82329050 - MGP_BALBcJ_P0044892 App protein_coding protein_coding MGP_BALBcJ_T0045301.1 MGP_BALBcJ_G0023052.1 mouse_genomes_project 16 93455284 93492072 - MGP_BALBcJ_P0045301 Lca5l protein_coding protein_coding MGP_BALBcJ_T0045302.1 MGP_BALBcJ_G0023052.1 mouse_genomes_project 16 93455783 93474843 - MGP_BALBcJ_P0045302 Lca5l protein_coding unknown_likely_coding MGP_BALBcJ_T0045303.1 MGP_BALBcJ_G0023052.1 mouse_genomes_project 16 93455945 93492079 - MGP_BALBcJ_P0045303 Lca5l protein_coding protein_coding MGP_BALBcJ_T0045304.1 MGP_BALBcJ_G0023052.1 mouse_genomes_project 16 93457376 93492072 - Lca5l protein_coding retained_intron MGP_BALBcJ_T0045305.1 MGP_BALBcJ_G0023052.1 mouse_genomes_project 16 93477318 93492079 - Lca5l protein_coding processed_transcript MGP_BALBcJ_T0044757.1 MGP_BALBcJ_G0022895.1 mouse_genomes_project 16 56228174 56232823 + MGP_BALBcJ_P0044757 protein_coding protein_coding MGP_BALBcJ_T0099510.1 MGP_BALBcJ_G0037546.1 mouse_genomes_project 16 14050337 14050404 - Gm22770 snRNA snRNA MGP_BALBcJ_T0100778.1 MGP_BALBcJ_G0038814.1 mouse_genomes_project 16 14833925 14834051 - Gm25777 snoRNA snoRNA MGP_BALBcJ_T0043056.1 MGP_BALBcJ_G0022468.1 mouse_genomes_project 16 6705853 6710265 + MGP_BALBcJ_P0043056 Rpl39l protein_coding protein_coding MGP_BALBcJ_T0043057.1 MGP_BALBcJ_G0022468.1 mouse_genomes_project 16 6705855 6710546 + MGP_BALBcJ_P0043057 Rpl39l protein_coding protein_coding MGP_BALBcJ_T0101639.1 MGP_BALBcJ_G0039644.1 mouse_genomes_project 16 695134 700264 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101640.1 MGP_BALBcJ_G0039644.1 mouse_genomes_project 16 699358 700157 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0043814.1 MGP_BALBcJ_G0022641.1 mouse_genomes_project 16 19659266 19676556 + MGP_BALBcJ_P0043814 Fetub protein_coding protein_coding MGP_BALBcJ_T0043815.1 MGP_BALBcJ_G0022641.1 mouse_genomes_project 16 19661106 19676556 + MGP_BALBcJ_P0043815 Fetub protein_coding protein_coding MGP_BALBcJ_T0043816.1 MGP_BALBcJ_G0022641.1 mouse_genomes_project 16 19662609 19676547 + MGP_BALBcJ_P0043816 Fetub protein_coding protein_coding MGP_BALBcJ_T0043817.1 MGP_BALBcJ_G0022641.1 mouse_genomes_project 16 19665722 19676550 + MGP_BALBcJ_P0043817 Fetub protein_coding protein_coding MGP_BALBcJ_T0100817.1 MGP_BALBcJ_G0038853.1 mouse_genomes_project 16 81884557 81884684 + Gm26153 snoRNA snoRNA MGP_BALBcJ_T0017448.1 MGP_BALBcJ_G0015250.1 mouse_genomes_project 16 14659339 14660488 + Gm15954 processed_transcript processed_transcript MGP_BALBcJ_T0044847.1 MGP_BALBcJ_G0022926.1 mouse_genomes_project 16 73361551 73448383 - MGP_BALBcJ_P0044847 Nrip1 protein_coding protein_coding MGP_BALBcJ_T0044848.1 MGP_BALBcJ_G0022926.1 mouse_genomes_project 16 73365013 73447605 - MGP_BALBcJ_P0044848 Nrip1 protein_coding protein_coding MGP_BALBcJ_T0044849.1 MGP_BALBcJ_G0022926.1 mouse_genomes_project 16 73368797 73397742 - MGP_BALBcJ_P0044849 Nrip1 protein_coding protein_coding MGP_BALBcJ_T0044850.1 MGP_BALBcJ_G0022926.1 mouse_genomes_project 16 73402679 73447593 - Nrip1 protein_coding retained_intron MGP_BALBcJ_T0044851.1 MGP_BALBcJ_G0022926.1 mouse_genomes_project 16 73402891 73447596 - Nrip1 protein_coding retained_intron MGP_BALBcJ_T0044852.1 MGP_BALBcJ_G0022926.1 mouse_genomes_project 16 73425967 73447605 - Nrip1 protein_coding retained_intron MGP_BALBcJ_T0013084.1 MGP_BALBcJ_G0011181.1 mouse_genomes_project 16 467469 467547 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043239.1 MGP_BALBcJ_G0022513.1 mouse_genomes_project 16 11158954 11215235 + MGP_BALBcJ_P0043239 A630010A05Rik protein_coding protein_coding MGP_BALBcJ_T0043240.1 MGP_BALBcJ_G0022513.1 mouse_genomes_project 16 11171640 11215257 + MGP_BALBcJ_P0043240 A630010A05Rik protein_coding protein_coding MGP_BALBcJ_T0043241.1 MGP_BALBcJ_G0022513.1 mouse_genomes_project 16 11182175 11215243 + MGP_BALBcJ_P0043241 A630010A05Rik protein_coding protein_coding MGP_BALBcJ_T0010113.1 MGP_BALBcJ_G0008238.1 mouse_genomes_project 16 25373858 25373967 - Mir690 miRNA miRNA MGP_BALBcJ_T0017465.1 MGP_BALBcJ_G0015261.1 mouse_genomes_project 16 63597499 63605010 + 1700010K23Rik processed_transcript processed_transcript MGP_BALBcJ_T0044915.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84661910 84674391 - MGP_BALBcJ_P0044915 Cct8 protein_coding protein_coding MGP_BALBcJ_T0044916.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84662572 84674306 - MGP_BALBcJ_P0044916 Cct8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044917.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84662572 84674306 - MGP_BALBcJ_P0044917 Cct8 protein_coding protein_coding MGP_BALBcJ_T0044918.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84663495 84667355 - MGP_BALBcJ_P0044918 Cct8 protein_coding protein_coding MGP_BALBcJ_T0044919.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84663950 84664582 - Cct8 protein_coding retained_intron MGP_BALBcJ_T0044920.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84664090 84664867 - Cct8 protein_coding retained_intron MGP_BALBcJ_T0044921.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84664238 84665009 - Cct8 protein_coding retained_intron MGP_BALBcJ_T0044922.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84667356 84669960 - Cct8 protein_coding processed_transcript MGP_BALBcJ_T0044923.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84667442 84674377 - MGP_BALBcJ_P0044923 Cct8 protein_coding protein_coding MGP_BALBcJ_T0044924.1 MGP_BALBcJ_G0022949.1 mouse_genomes_project 16 84668999 84674222 - MGP_BALBcJ_P0044924 Cct8 protein_coding protein_coding MGP_BALBcJ_T0003671.1 MGP_BALBcJ_G0003320.1 mouse_genomes_project 16 57540693 57546885 + Gm9017 antisense antisense MGP_BALBcJ_T0003672.1 MGP_BALBcJ_G0003320.1 mouse_genomes_project 16 57541682 57547165 + Gm9017 antisense antisense MGP_BALBcJ_T0043858.1 MGP_BALBcJ_G0022652.1 mouse_genomes_project 16 20388986 20393527 + MGP_BALBcJ_P0043858 Rtp4 protein_coding protein_coding MGP_BALBcJ_T0043534.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14942998 15004741 + MGP_BALBcJ_P0043534 Arvcf protein_coding protein_coding MGP_BALBcJ_T0043535.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14943090 15004737 + MGP_BALBcJ_P0043535 Arvcf protein_coding protein_coding MGP_BALBcJ_T0043536.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14943090 15004741 + MGP_BALBcJ_P0043536 Arvcf protein_coding protein_coding MGP_BALBcJ_T0043537.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14977410 15004412 + MGP_BALBcJ_P0043537 Arvcf protein_coding protein_coding MGP_BALBcJ_T0043538.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14989369 15004741 + MGP_BALBcJ_P0043538 Arvcf protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043539.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14989370 15003921 + MGP_BALBcJ_P0043539 Arvcf protein_coding protein_coding MGP_BALBcJ_T0043540.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14994505 14996671 + Arvcf protein_coding processed_transcript MGP_BALBcJ_T0043541.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14996754 14998305 + Arvcf protein_coding retained_intron MGP_BALBcJ_T0043542.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 14998796 15001096 + Arvcf protein_coding processed_transcript MGP_BALBcJ_T0043543.1 MGP_BALBcJ_G0022575.1 mouse_genomes_project 16 15001113 15002123 + Arvcf protein_coding retained_intron MGP_BALBcJ_T0010124.1 MGP_BALBcJ_G0008249.1 mouse_genomes_project 16 40803645 40803771 + Mir3470b miRNA miRNA MGP_BALBcJ_T0044682.1 MGP_BALBcJ_G0022862.1 mouse_genomes_project 16 53996734 54007916 - MGP_BALBcJ_P0044682 Nit2 protein_coding protein_coding MGP_BALBcJ_T0045144.1 MGP_BALBcJ_G0023023.1 mouse_genomes_project 16 89522892 89530219 + MGP_BALBcJ_P0045144 Kcne2 protein_coding protein_coding MGP_BALBcJ_T0045145.1 MGP_BALBcJ_G0023023.1 mouse_genomes_project 16 89527705 89530219 + MGP_BALBcJ_P0045145 Kcne2 protein_coding protein_coding MGP_BALBcJ_T0098534.1 MGP_BALBcJ_G0036588.1 mouse_genomes_project 16 94816827 94816935 - Gm24777 rRNA rRNA MGP_BALBcJ_T0042971.1 MGP_BALBcJ_G0022444.1 mouse_genomes_project 16 1426521 1449019 - MGP_BALBcJ_P0042971 Anks3 protein_coding protein_coding MGP_BALBcJ_T0003662.1 MGP_BALBcJ_G0003313.1 mouse_genomes_project 16 35642744 35643081 + antisense antisense MGP_BALBcJ_T0013161.1 MGP_BALBcJ_G0011258.1 mouse_genomes_project 16 58416023 58416534 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006823.1 MGP_BALBcJ_G0005622.1 mouse_genomes_project 16 26966157 26971382 + 1700025H01Rik lincRNA lincRNA MGP_BALBcJ_T0043595.1 MGP_BALBcJ_G0022586.1 mouse_genomes_project 16 15445094 15448700 + MGP_BALBcJ_P0043595 2510002D24Rik protein_coding protein_coding MGP_BALBcJ_T0043596.1 MGP_BALBcJ_G0022586.1 mouse_genomes_project 16 15445097 15445904 + MGP_BALBcJ_P0043596 2510002D24Rik protein_coding protein_coding MGP_BALBcJ_T0043597.1 MGP_BALBcJ_G0022586.1 mouse_genomes_project 16 15445097 15448585 + MGP_BALBcJ_P0043597 2510002D24Rik protein_coding protein_coding MGP_BALBcJ_T0043599.1 MGP_BALBcJ_G0022586.1 mouse_genomes_project 16 15445171 15448315 + 2510002D24Rik protein_coding retained_intron MGP_BALBcJ_T0043245.1 MGP_BALBcJ_G0022517.1 mouse_genomes_project 16 12176637 12190591 - MGP_BALBcJ_P0043245 Mcm4 protein_coding protein_coding MGP_BALBcJ_T0010117.1 MGP_BALBcJ_G0008242.1 mouse_genomes_project 16 29887204 29887289 + Mir1947 miRNA miRNA MGP_BALBcJ_T0043902.1 MGP_BALBcJ_G0022670.1 mouse_genomes_project 16 25987461 26008269 + MGP_BALBcJ_P0043902 Hrasls protein_coding protein_coding MGP_BALBcJ_T0043903.1 MGP_BALBcJ_G0022670.1 mouse_genomes_project 16 25987874 26006120 + MGP_BALBcJ_P0043903 Hrasls protein_coding protein_coding MGP_BALBcJ_T0043904.1 MGP_BALBcJ_G0022670.1 mouse_genomes_project 16 25987896 26005966 + Hrasls protein_coding processed_transcript MGP_BALBcJ_T0043905.1 MGP_BALBcJ_G0022670.1 mouse_genomes_project 16 25987936 25998079 + MGP_BALBcJ_P0043905 Hrasls protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043881.1 MGP_BALBcJ_G0022661.1 mouse_genomes_project 16 23263899 23283369 + MGP_BALBcJ_P0043881 Cldn16 protein_coding protein_coding MGP_BALBcJ_T0043882.1 MGP_BALBcJ_G0022661.1 mouse_genomes_project 16 23264020 23283367 + MGP_BALBcJ_P0043882 Cldn16 protein_coding protein_coding MGP_BALBcJ_T0013101.1 MGP_BALBcJ_G0011198.1 mouse_genomes_project 16 12433141 12433424 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099535.1 MGP_BALBcJ_G0037571.1 mouse_genomes_project 16 42845612 42845719 - Gm24754 snRNA snRNA MGP_BALBcJ_T0017454.1 MGP_BALBcJ_G0015255.1 mouse_genomes_project 16 23513142 23553252 - Gm20319 processed_transcript processed_transcript MGP_BALBcJ_T0017455.1 MGP_BALBcJ_G0015255.1 mouse_genomes_project 16 23513440 23553263 - Gm20319 processed_transcript processed_transcript MGP_BALBcJ_T0017456.1 MGP_BALBcJ_G0015255.1 mouse_genomes_project 16 23528615 23553263 - Gm20319 processed_transcript processed_transcript MGP_BALBcJ_T0017488.1 MGP_BALBcJ_G0015267.1 mouse_genomes_project 16 88831258 88843647 + Gm15964 processed_transcript processed_transcript MGP_BALBcJ_T0043029.1 MGP_BALBcJ_G0022462.1 mouse_genomes_project 16 5163286 5183141 + MGP_BALBcJ_P0043029 Pmm2 protein_coding protein_coding MGP_BALBcJ_T0043030.1 MGP_BALBcJ_G0022462.1 mouse_genomes_project 16 5163335 5174725 + Pmm2 protein_coding retained_intron MGP_BALBcJ_T0043031.1 MGP_BALBcJ_G0022462.1 mouse_genomes_project 16 5163350 5170629 + Pmm2 protein_coding retained_intron MGP_BALBcJ_T0043032.1 MGP_BALBcJ_G0022462.1 mouse_genomes_project 16 5163654 5177037 + Pmm2 protein_coding processed_transcript MGP_BALBcJ_T0043033.1 MGP_BALBcJ_G0022462.1 mouse_genomes_project 16 5171583 5174320 + Pmm2 protein_coding retained_intron MGP_BALBcJ_T0043034.1 MGP_BALBcJ_G0022462.1 mouse_genomes_project 16 5174201 5182352 + Pmm2 protein_coding retained_intron MGP_BALBcJ_T0043868.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22481884 22624838 + MGP_BALBcJ_P0043868 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043869.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22481886 22696152 + MGP_BALBcJ_P0043869 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043870.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22481886 22681209 + MGP_BALBcJ_P0043870 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043871.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22481886 22696167 + MGP_BALBcJ_P0043871 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043872.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22604953 22681209 + MGP_BALBcJ_P0043872 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043873.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22604953 22671928 + MGP_BALBcJ_P0043873 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043874.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22604953 22696167 + MGP_BALBcJ_P0043874 Trp63 protein_coding protein_coding MGP_BALBcJ_T0043875.1 MGP_BALBcJ_G0022658.1 mouse_genomes_project 16 22604953 22696167 + MGP_BALBcJ_P0043875 Trp63 protein_coding protein_coding MGP_BALBcJ_T0044688.1 MGP_BALBcJ_G0022865.1 mouse_genomes_project 16 54137148 54442816 - MGP_BALBcJ_P0044688 Cmss1 protein_coding protein_coding MGP_BALBcJ_T0099513.1 MGP_BALBcJ_G0037549.1 mouse_genomes_project 16 18495521 18495627 + Gm24898 snRNA snRNA MGP_BALBcJ_T0013148.1 MGP_BALBcJ_G0011245.1 mouse_genomes_project 16 43904956 43912236 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043476.1 MGP_BALBcJ_G0022559.1 mouse_genomes_project 16 14483032 14486732 + MGP_BALBcJ_P0043476 Tssk1 protein_coding protein_coding MGP_BALBcJ_T0006851.1 MGP_BALBcJ_G0005643.1 mouse_genomes_project 16 81849669 81861734 + Mir155hg lincRNA lincRNA MGP_BALBcJ_T0006852.1 MGP_BALBcJ_G0005643.1 mouse_genomes_project 16 81859511 81861734 + Mir155hg lincRNA lincRNA MGP_BALBcJ_T0042860.1 MGP_BALBcJ_G0022421.1 mouse_genomes_project 16 343934 357844 - 1700037C18Rik protein_coding processed_transcript MGP_BALBcJ_T0042861.1 MGP_BALBcJ_G0022421.1 mouse_genomes_project 16 343936 356948 - MGP_BALBcJ_P0042861 1700037C18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042863.1 MGP_BALBcJ_G0022421.1 mouse_genomes_project 16 353058 357880 - MGP_BALBcJ_P0042863 1700037C18Rik protein_coding protein_coding MGP_BALBcJ_T0042864.1 MGP_BALBcJ_G0022421.1 mouse_genomes_project 16 354989 356893 - MGP_BALBcJ_P0042864 1700037C18Rik protein_coding protein_coding MGP_BALBcJ_T0042865.1 MGP_BALBcJ_G0022421.1 mouse_genomes_project 16 355448 356842 - MGP_BALBcJ_P0042865 1700037C18Rik protein_coding protein_coding MGP_BALBcJ_T0042866.1 MGP_BALBcJ_G0022421.1 mouse_genomes_project 16 356203 357814 - MGP_BALBcJ_P0042866 1700037C18Rik protein_coding protein_coding MGP_BALBcJ_T0044816.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67353991 67599626 + MGP_BALBcJ_P0044816 Gbe1 protein_coding protein_coding MGP_BALBcJ_T0044817.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67354105 67404046 + Gbe1 protein_coding retained_intron MGP_BALBcJ_T0044818.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67354106 67573558 + Gbe1 protein_coding retained_intron MGP_BALBcJ_T0044819.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67354106 67573127 + MGP_BALBcJ_P0044819 Gbe1 protein_coding protein_coding MGP_BALBcJ_T0044820.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67354129 67599626 + MGP_BALBcJ_P0044820 Gbe1 protein_coding protein_coding MGP_BALBcJ_T0044821.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67354176 67599624 + MGP_BALBcJ_P0044821 Gbe1 protein_coding protein_coding MGP_BALBcJ_T0044822.1 MGP_BALBcJ_G0022919.1 mouse_genomes_project 16 67590949 67599407 + Gbe1 protein_coding retained_intron MGP_BALBcJ_T0010089.1 MGP_BALBcJ_G0008214.1 mouse_genomes_project 16 5148508 5148616 - Gm22137 miRNA miRNA MGP_BALBcJ_T0044355.1 MGP_BALBcJ_G0022784.1 mouse_genomes_project 16 35341503 35366540 - MGP_BALBcJ_P0044355 Poglut1 protein_coding protein_coding MGP_BALBcJ_T0044356.1 MGP_BALBcJ_G0022784.1 mouse_genomes_project 16 35341506 35366504 - Poglut1 protein_coding retained_intron MGP_BALBcJ_T0044357.1 MGP_BALBcJ_G0022784.1 mouse_genomes_project 16 35342991 35366489 - MGP_BALBcJ_P0044357 Poglut1 protein_coding unknown_likely_coding MGP_BALBcJ_T0044358.1 MGP_BALBcJ_G0022784.1 mouse_genomes_project 16 35345810 35348803 - Poglut1 protein_coding retained_intron MGP_BALBcJ_T0044359.1 MGP_BALBcJ_G0022784.1 mouse_genomes_project 16 35350407 35354276 - Poglut1 protein_coding retained_intron MGP_BALBcJ_T0044360.1 MGP_BALBcJ_G0022784.1 mouse_genomes_project 16 35364301 35366504 - Poglut1 protein_coding retained_intron MGP_BALBcJ_T0044895.1 MGP_BALBcJ_G0022943.1 mouse_genomes_project 16 82946046 82955333 - MGP_BALBcJ_P0044895 Adamts1 protein_coding protein_coding MGP_BALBcJ_T0044896.1 MGP_BALBcJ_G0022943.1 mouse_genomes_project 16 82947695 82953701 - MGP_BALBcJ_P0044896 Adamts1 protein_coding protein_coding MGP_BALBcJ_T0044897.1 MGP_BALBcJ_G0022943.1 mouse_genomes_project 16 82950450 82951858 - Adamts1 protein_coding processed_transcript MGP_BALBcJ_T0043403.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14102455 14105610 - MGP_BALBcJ_P0043403 Thap7 protein_coding protein_coding MGP_BALBcJ_T0043404.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14102659 14105586 - Thap7 protein_coding retained_intron MGP_BALBcJ_T0043405.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14102723 14105526 - Thap7 protein_coding retained_intron MGP_BALBcJ_T0043406.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14102817 14105155 - Thap7 protein_coding retained_intron MGP_BALBcJ_T0043407.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14102974 14103622 - Thap7 protein_coding retained_intron MGP_BALBcJ_T0043408.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14103055 14105529 - MGP_BALBcJ_P0043408 Thap7 protein_coding protein_coding MGP_BALBcJ_T0043409.1 MGP_BALBcJ_G0022547.1 mouse_genomes_project 16 14103476 14105130 - Thap7 protein_coding retained_intron MGP_BALBcJ_T0100785.1 MGP_BALBcJ_G0038821.1 mouse_genomes_project 16 19886161 19886290 + Gm26447 snoRNA snoRNA MGP_BALBcJ_T0044137.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30482915 30520918 + Heg1 protein_coding retained_intron MGP_BALBcJ_T0044138.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30482915 30572566 + MGP_BALBcJ_P0044138 Heg1 protein_coding protein_coding MGP_BALBcJ_T0044139.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30482994 30570433 + MGP_BALBcJ_P0044139 Heg1 protein_coding protein_coding MGP_BALBcJ_T0044140.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30483061 30572547 + MGP_BALBcJ_P0044140 Heg1 protein_coding unknown_likely_coding MGP_BALBcJ_T0044141.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30531254 30539920 + Heg1 protein_coding processed_transcript MGP_BALBcJ_T0044142.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30553793 30562002 + Heg1 protein_coding retained_intron MGP_BALBcJ_T0044143.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30556603 30569824 + Heg1 protein_coding processed_transcript MGP_BALBcJ_T0044144.1 MGP_BALBcJ_G0022724.1 mouse_genomes_project 16 30557576 30561848 + Heg1 protein_coding retained_intron MGP_BALBcJ_T0044375.1 MGP_BALBcJ_G0022786.1 mouse_genomes_project 16 35414944 35530185 - MGP_BALBcJ_P0044375 Arhgap31 protein_coding protein_coding MGP_BALBcJ_T0044376.1 MGP_BALBcJ_G0022786.1 mouse_genomes_project 16 35439523 35529810 - Arhgap31 protein_coding processed_transcript MGP_BALBcJ_T0044377.1 MGP_BALBcJ_G0022786.1 mouse_genomes_project 16 35454005 35529809 - Arhgap31 protein_coding retained_intron MGP_BALBcJ_T0042960.1 MGP_BALBcJ_G0022440.1 mouse_genomes_project 16 1311393 1329039 + MGP_BALBcJ_P0042960 4930562C15Rik protein_coding non_stop_decay MGP_BALBcJ_T0042961.1 MGP_BALBcJ_G0022440.1 mouse_genomes_project 16 1311393 1349402 + MGP_BALBcJ_P0042961 4930562C15Rik protein_coding protein_coding MGP_BALBcJ_T0042962.1 MGP_BALBcJ_G0022440.1 mouse_genomes_project 16 1317075 1329045 + MGP_BALBcJ_P0042962 4930562C15Rik protein_coding non_stop_decay MGP_BALBcJ_T0042963.1 MGP_BALBcJ_G0022440.1 mouse_genomes_project 16 1327650 1342875 + MGP_BALBcJ_P0042963 4930562C15Rik protein_coding protein_coding MGP_BALBcJ_T0042964.1 MGP_BALBcJ_G0022440.1 mouse_genomes_project 16 1343385 1349060 + MGP_BALBcJ_P0042964 4930562C15Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042965.1 MGP_BALBcJ_G0022440.1 mouse_genomes_project 16 1346033 1346889 + 4930562C15Rik protein_coding retained_intron MGP_BALBcJ_T0043819.1 MGP_BALBcJ_G0022643.1 mouse_genomes_project 16 19726134 19777281 - MGP_BALBcJ_P0043819 Kng2 protein_coding protein_coding MGP_BALBcJ_T0043820.1 MGP_BALBcJ_G0022643.1 mouse_genomes_project 16 19728980 19777230 - MGP_BALBcJ_P0043820 Kng2 protein_coding protein_coding MGP_BALBcJ_T0043821.1 MGP_BALBcJ_G0022643.1 mouse_genomes_project 16 19729022 19777314 - MGP_BALBcJ_P0043821 Kng2 protein_coding protein_coding MGP_BALBcJ_T0043822.1 MGP_BALBcJ_G0022643.1 mouse_genomes_project 16 19729022 19777222 - MGP_BALBcJ_P0043822 Kng2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013123.1 MGP_BALBcJ_G0011220.1 mouse_genomes_project 16 24127600 24128434 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044903.1 MGP_BALBcJ_G0022947.1 mouse_genomes_project 16 84612248 84619415 - MGP_BALBcJ_P0044903 Rwdd2b protein_coding protein_coding MGP_BALBcJ_T0044904.1 MGP_BALBcJ_G0022947.1 mouse_genomes_project 16 84615537 84619415 - Rwdd2b protein_coding processed_transcript MGP_BALBcJ_T0043065.1 MGP_BALBcJ_G0022472.1 mouse_genomes_project 16 6949694 6962169 + MGP_BALBcJ_P0043065 Nubp1 protein_coding protein_coding MGP_BALBcJ_T0043066.1 MGP_BALBcJ_G0022472.1 mouse_genomes_project 16 6949695 6959413 + Nubp1 protein_coding processed_transcript MGP_BALBcJ_T0043067.1 MGP_BALBcJ_G0022472.1 mouse_genomes_project 16 6949700 6958292 + Nubp1 protein_coding retained_intron MGP_BALBcJ_T0043068.1 MGP_BALBcJ_G0022472.1 mouse_genomes_project 16 6949716 6962169 + Nubp1 protein_coding retained_intron MGP_BALBcJ_T0043069.1 MGP_BALBcJ_G0022472.1 mouse_genomes_project 16 6949810 6959178 + Nubp1 protein_coding retained_intron MGP_BALBcJ_T0043071.1 MGP_BALBcJ_G0022472.1 mouse_genomes_project 16 6958976 6961087 + Nubp1 protein_coding processed_transcript MGP_BALBcJ_T0044245.1 MGP_BALBcJ_G0022757.1 mouse_genomes_project 16 33481362 33514129 + MGP_BALBcJ_P0044245 Ildr1 protein_coding protein_coding MGP_BALBcJ_T0044246.1 MGP_BALBcJ_G0022757.1 mouse_genomes_project 16 33481414 33504777 + Ildr1 protein_coding retained_intron MGP_BALBcJ_T0044247.1 MGP_BALBcJ_G0022757.1 mouse_genomes_project 16 33481541 33512940 + MGP_BALBcJ_P0044247 Ildr1 protein_coding protein_coding MGP_BALBcJ_T0044248.1 MGP_BALBcJ_G0022757.1 mouse_genomes_project 16 33502909 33509642 + Ildr1 protein_coding retained_intron MGP_BALBcJ_T0043414.1 MGP_BALBcJ_G0022549.1 mouse_genomes_project 16 14143935 14154060 + MGP_BALBcJ_P0043414 P2rx6 protein_coding protein_coding MGP_BALBcJ_T0043415.1 MGP_BALBcJ_G0022549.1 mouse_genomes_project 16 14143935 14153149 + MGP_BALBcJ_P0043415 P2rx6 protein_coding protein_coding MGP_BALBcJ_T0043416.1 MGP_BALBcJ_G0022549.1 mouse_genomes_project 16 14143983 14159849 + MGP_BALBcJ_P0043416 P2rx6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044824.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70945734 71478443 - MGP_BALBcJ_P0044824 Robo2 protein_coding unknown_likely_coding MGP_BALBcJ_T0044825.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70946202 71478520 - MGP_BALBcJ_P0044825 Robo2 protein_coding protein_coding MGP_BALBcJ_T0044826.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70948251 71478823 - MGP_BALBcJ_P0044826 Robo2 protein_coding protein_coding MGP_BALBcJ_T0044827.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70948560 70953779 - Robo2 protein_coding retained_intron MGP_BALBcJ_T0044828.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70950927 70960847 - Robo2 protein_coding processed_transcript MGP_BALBcJ_T0044829.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70983632 71479316 - MGP_BALBcJ_P0044829 Robo2 protein_coding protein_coding MGP_BALBcJ_T0044830.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 70983887 70998292 - Robo2 protein_coding retained_intron MGP_BALBcJ_T0044831.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 71047339 71087907 - Robo2 protein_coding processed_transcript MGP_BALBcJ_T0044832.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 71104056 71478968 - Robo2 protein_coding retained_intron MGP_BALBcJ_T0044833.1 MGP_BALBcJ_G0022921.1 mouse_genomes_project 16 71422635 71479356 - Robo2 protein_coding retained_intron MGP_BALBcJ_T0003642.1 MGP_BALBcJ_G0003298.1 mouse_genomes_project 16 19246533 19252713 + 9230117E06Rik antisense antisense MGP_BALBcJ_T0006863.1 MGP_BALBcJ_G0005650.1 mouse_genomes_project 16 93088087 93090568 - 2810404F17Rik lincRNA lincRNA MGP_BALBcJ_T0044898.1 MGP_BALBcJ_G0022944.1 mouse_genomes_project 16 83009930 83058569 - MGP_BALBcJ_P0044898 Adamts5 protein_coding protein_coding MGP_BALBcJ_T0045097.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88910465 88950708 - MGP_BALBcJ_P0045097 Cryzl1 protein_coding protein_coding MGP_BALBcJ_T0045098.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88910485 88950535 - MGP_BALBcJ_P0045098 Cryzl1 protein_coding protein_coding MGP_BALBcJ_T0045099.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88910669 88913970 - Cryzl1 protein_coding processed_transcript MGP_BALBcJ_T0045100.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88910749 88950356 - MGP_BALBcJ_P0045100 Cryzl1 protein_coding protein_coding MGP_BALBcJ_T0045101.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88913138 88930357 - MGP_BALBcJ_P0045101 Cryzl1 protein_coding protein_coding MGP_BALBcJ_T0045102.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88913164 88939388 - MGP_BALBcJ_P0045102 Cryzl1 protein_coding protein_coding MGP_BALBcJ_T0045103.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88915155 88950434 - MGP_BALBcJ_P0045103 Cryzl1 protein_coding protein_coding MGP_BALBcJ_T0045104.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88915408 88920296 - Cryzl1 protein_coding retained_intron MGP_BALBcJ_T0045105.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88928502 88950333 - Cryzl1 protein_coding retained_intron MGP_BALBcJ_T0045106.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88935827 88950331 - Cryzl1 protein_coding retained_intron MGP_BALBcJ_T0045107.1 MGP_BALBcJ_G0023019.1 mouse_genomes_project 16 88937014 88950341 - Cryzl1 protein_coding processed_transcript MGP_BALBcJ_T0044716.1 MGP_BALBcJ_G0022872.1 mouse_genomes_project 16 55469049 55479206 + MGP_BALBcJ_P0044716 Cpox protein_coding protein_coding MGP_BALBcJ_T0043036.1 MGP_BALBcJ_G0022464.1 mouse_genomes_project 16 5206379 5209515 + MGP_BALBcJ_P0043036 Gm43786 protein_coding protein_coding MGP_BALBcJ_T0043037.1 MGP_BALBcJ_G0022464.1 mouse_genomes_project 16 5208439 5209521 + Gm43786 protein_coding processed_transcript MGP_BALBcJ_T0003664.1 MGP_BALBcJ_G0003315.1 mouse_genomes_project 16 42561887 42562507 + Gm15591 antisense antisense MGP_BALBcJ_T0044958.1 MGP_BALBcJ_G0022975.1 mouse_genomes_project 16 86202172 86202552 - MGP_BALBcJ_P0044958 Krtap22-2 protein_coding protein_coding MGP_BALBcJ_T0044428.1 MGP_BALBcJ_G0022797.1 mouse_genomes_project 16 40682415 40729283 + MGP_BALBcJ_P0044428 Ccdc191 protein_coding protein_coding MGP_BALBcJ_T0044429.1 MGP_BALBcJ_G0022797.1 mouse_genomes_project 16 40682418 40753962 + MGP_BALBcJ_P0044429 Ccdc191 protein_coding protein_coding MGP_BALBcJ_T0044430.1 MGP_BALBcJ_G0022797.1 mouse_genomes_project 16 40682456 40700991 + MGP_BALBcJ_P0044430 Ccdc191 protein_coding protein_coding MGP_BALBcJ_T0044431.1 MGP_BALBcJ_G0022797.1 mouse_genomes_project 16 40682507 40753352 + MGP_BALBcJ_P0044431 Ccdc191 protein_coding protein_coding MGP_BALBcJ_T0044432.1 MGP_BALBcJ_G0022797.1 mouse_genomes_project 16 40728720 40733305 + Ccdc191 protein_coding processed_transcript MGP_BALBcJ_T0044433.1 MGP_BALBcJ_G0022797.1 mouse_genomes_project 16 40728841 40753962 + MGP_BALBcJ_P0044433 Ccdc191 protein_coding protein_coding MGP_BALBcJ_T0100782.1 MGP_BALBcJ_G0038818.1 mouse_genomes_project 16 19883812 19883881 + Snord2 snoRNA snoRNA MGP_BALBcJ_T0099533.1 MGP_BALBcJ_G0037569.1 mouse_genomes_project 16 37108108 37108202 + Gm22543 snRNA snRNA MGP_BALBcJ_T0042995.1 MGP_BALBcJ_G0022451.1 mouse_genomes_project 16 1574291 1624511 - MGP_BALBcJ_P0042995 Ppl protein_coding protein_coding MGP_BALBcJ_T0044732.1 MGP_BALBcJ_G0022880.1 mouse_genomes_project 16 55757160 55788598 - MGP_BALBcJ_P0044732 Olfr180 protein_coding protein_coding MGP_BALBcJ_T0044733.1 MGP_BALBcJ_G0022880.1 mouse_genomes_project 16 55767606 55776255 - MGP_BALBcJ_P0044733 Olfr180 protein_coding protein_coding MGP_BALBcJ_T0044734.1 MGP_BALBcJ_G0022880.1 mouse_genomes_project 16 55768154 55776255 - MGP_BALBcJ_P0044734 Olfr180 protein_coding protein_coding MGP_BALBcJ_T0098533.1 MGP_BALBcJ_G0036587.1 mouse_genomes_project 16 81966440 81966538 + Gm25908 rRNA rRNA MGP_BALBcJ_T0043137.1 MGP_BALBcJ_G0022489.1 mouse_genomes_project 16 7778291 7812943 - MGP_BALBcJ_P0043137 Gspt1 protein_coding protein_coding MGP_BALBcJ_T0043138.1 MGP_BALBcJ_G0022489.1 mouse_genomes_project 16 7779051 7812882 - MGP_BALBcJ_P0043138 Gspt1 protein_coding protein_coding MGP_BALBcJ_T0043139.1 MGP_BALBcJ_G0022489.1 mouse_genomes_project 16 7779400 7783498 - MGP_BALBcJ_P0043139 Gspt1 protein_coding protein_coding MGP_BALBcJ_T0043140.1 MGP_BALBcJ_G0022489.1 mouse_genomes_project 16 7781584 7787517 - Gspt1 protein_coding retained_intron MGP_BALBcJ_T0043141.1 MGP_BALBcJ_G0022489.1 mouse_genomes_project 16 7789917 7797261 - Gspt1 protein_coding retained_intron MGP_BALBcJ_T0043189.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10408042 10480626 - MGP_BALBcJ_P0043189 Pdxdc1 protein_coding protein_coding MGP_BALBcJ_T0043190.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10408472 10416203 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043192.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10409049 10421307 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043193.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10409054 10480520 - MGP_BALBcJ_P0043193 Pdxdc1 protein_coding protein_coding MGP_BALBcJ_T0043194.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10409170 10412957 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043195.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10410486 10480481 - Pdxdc1 protein_coding retained_intron MGP_BALBcJ_T0043196.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10411682 10415212 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043197.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10412831 10416208 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043198.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10413508 10414237 - Pdxdc1 protein_coding retained_intron MGP_BALBcJ_T0043199.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10423589 10480554 - MGP_BALBcJ_P0043199 Pdxdc1 protein_coding protein_coding MGP_BALBcJ_T0043200.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10425153 10480630 - MGP_BALBcJ_P0043200 Pdxdc1 protein_coding protein_coding MGP_BALBcJ_T0043201.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10435905 10452282 - Pdxdc1 protein_coding retained_intron MGP_BALBcJ_T0043202.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10452112 10480484 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043203.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10457747 10480474 - Pdxdc1 protein_coding processed_transcript MGP_BALBcJ_T0043204.1 MGP_BALBcJ_G0022503.1 mouse_genomes_project 16 10463659 10480479 - Pdxdc1 protein_coding retained_intron MGP_BALBcJ_T0010106.1 MGP_BALBcJ_G0008231.1 mouse_genomes_project 16 16504953 16505055 - Gm27883 miRNA miRNA MGP_BALBcJ_T0045329.1 MGP_BALBcJ_G0023058.1 mouse_genomes_project 16 93897815 94480168 - MGP_BALBcJ_P0045329 Dscam protein_coding protein_coding MGP_BALBcJ_T0102270.1 MGP_BALBcJ_G0040086.1 mouse_genomes_project 16 55827327 55827898 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006862.1 MGP_BALBcJ_G0005649.1 mouse_genomes_project 16 91058878 91061617 - 2310043M15Rik lincRNA lincRNA MGP_BALBcJ_T0043171.1 MGP_BALBcJ_G0022499.1 mouse_genomes_project 16 10234692 10241170 + MGP_BALBcJ_P0043171 3110001I22Rik protein_coding protein_coding MGP_BALBcJ_T0043802.1 MGP_BALBcJ_G0022636.1 mouse_genomes_project 16 19201198 19392500 - MGP_BALBcJ_P0043802 Dgkg protein_coding protein_coding MGP_BALBcJ_T0043803.1 MGP_BALBcJ_G0022636.1 mouse_genomes_project 16 19201959 19392548 - MGP_BALBcJ_P0043803 Dgkg protein_coding protein_coding MGP_BALBcJ_T0043804.1 MGP_BALBcJ_G0022636.1 mouse_genomes_project 16 19283718 19392515 - MGP_BALBcJ_P0043804 Dgkg protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043805.1 MGP_BALBcJ_G0022636.1 mouse_genomes_project 16 19330744 19392355 - Dgkg protein_coding processed_transcript MGP_BALBcJ_T0043251.1 MGP_BALBcJ_G0022520.1 mouse_genomes_project 16 12450539 12721781 - MGP_BALBcJ_P0043251 Spidr protein_coding protein_coding MGP_BALBcJ_T0013141.1 MGP_BALBcJ_G0011238.1 mouse_genomes_project 16 40093762 40094297 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044842.1 MGP_BALBcJ_G0022925.1 mouse_genomes_project 16 72937180 72988715 - MGP_BALBcJ_P0044842 Samsn1 protein_coding protein_coding MGP_BALBcJ_T0044843.1 MGP_BALBcJ_G0022925.1 mouse_genomes_project 16 72937181 73091912 - MGP_BALBcJ_P0044843 Samsn1 protein_coding protein_coding MGP_BALBcJ_T0044844.1 MGP_BALBcJ_G0022925.1 mouse_genomes_project 16 72961112 72988645 - Samsn1 protein_coding retained_intron MGP_BALBcJ_T0044845.1 MGP_BALBcJ_G0022925.1 mouse_genomes_project 16 72962204 72988715 - Samsn1 protein_coding retained_intron MGP_BALBcJ_T0044846.1 MGP_BALBcJ_G0022925.1 mouse_genomes_project 16 72966730 72988684 - Samsn1 protein_coding retained_intron MGP_BALBcJ_T0044751.1 MGP_BALBcJ_G0022889.1 mouse_genomes_project 16 56037289 56038284 + MGP_BALBcJ_P0044751 Olfr195 protein_coding protein_coding MGP_BALBcJ_T0044481.1 MGP_BALBcJ_G0022808.1 mouse_genomes_project 16 41545786 41555342 - MGP_BALBcJ_P0044481 Gtpbp8 protein_coding protein_coding MGP_BALBcJ_T0044482.1 MGP_BALBcJ_G0022808.1 mouse_genomes_project 16 41548160 41555338 - MGP_BALBcJ_P0044482 Gtpbp8 protein_coding protein_coding MGP_BALBcJ_T0044483.1 MGP_BALBcJ_G0022808.1 mouse_genomes_project 16 41548283 41555262 - MGP_BALBcJ_P0044483 Gtpbp8 protein_coding protein_coding MGP_BALBcJ_T0044484.1 MGP_BALBcJ_G0022808.1 mouse_genomes_project 16 41552786 41555288 - MGP_BALBcJ_P0044484 Gtpbp8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044034.1 MGP_BALBcJ_G0022700.1 mouse_genomes_project 16 29021317 29030965 + Wdr53 protein_coding processed_transcript MGP_BALBcJ_T0044035.1 MGP_BALBcJ_G0022700.1 mouse_genomes_project 16 29021317 29031286 + MGP_BALBcJ_P0044035 Wdr53 protein_coding protein_coding MGP_BALBcJ_T0044036.1 MGP_BALBcJ_G0022700.1 mouse_genomes_project 16 29021343 29031295 + MGP_BALBcJ_P0044036 Wdr53 protein_coding protein_coding MGP_BALBcJ_T0044037.1 MGP_BALBcJ_G0022700.1 mouse_genomes_project 16 29021491 29026177 + Wdr53 protein_coding retained_intron MGP_BALBcJ_T0010116.1 MGP_BALBcJ_G0008241.1 mouse_genomes_project 16 29850379 29850452 + Gm22231 miRNA miRNA MGP_BALBcJ_T0043548.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024550 15077657 + MGP_BALBcJ_P0043548 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043549.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024583 15077663 + MGP_BALBcJ_P0043549 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043550.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024583 15077660 + MGP_BALBcJ_P0043550 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043551.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024604 15077657 + MGP_BALBcJ_P0043551 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043552.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024604 15055060 + MGP_BALBcJ_P0043552 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043553.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024604 15077657 + MGP_BALBcJ_P0043553 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043554.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024607 15077661 + MGP_BALBcJ_P0043554 Txnrd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043555.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024611 15077660 + MGP_BALBcJ_P0043555 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043556.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15024628 15035905 + MGP_BALBcJ_P0043556 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043557.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15026863 15035903 + MGP_BALBcJ_P0043557 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043558.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15027091 15041798 + MGP_BALBcJ_P0043558 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043559.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15039392 15041041 + MGP_BALBcJ_P0043559 Txnrd2 protein_coding protein_coding MGP_BALBcJ_T0043560.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15050630 15073279 + Txnrd2 protein_coding processed_transcript MGP_BALBcJ_T0043561.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15050636 15073325 + Txnrd2 protein_coding processed_transcript MGP_BALBcJ_T0043562.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15070410 15073288 + Txnrd2 protein_coding processed_transcript MGP_BALBcJ_T0043563.1 MGP_BALBcJ_G0022577.1 mouse_genomes_project 16 15070440 15073277 + Txnrd2 protein_coding processed_transcript MGP_BALBcJ_T0042838.1 MGP_BALBcJ_G0022415.1 mouse_genomes_project 16 183549 190143 + Zfp263 protein_coding retained_intron MGP_BALBcJ_T0042839.1 MGP_BALBcJ_G0022415.1 mouse_genomes_project 16 183556 189247 + Zfp263 protein_coding processed_transcript MGP_BALBcJ_T0042840.1 MGP_BALBcJ_G0022415.1 mouse_genomes_project 16 183606 190143 + MGP_BALBcJ_P0042840 Zfp263 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042841.1 MGP_BALBcJ_G0022415.1 mouse_genomes_project 16 183734 188634 + Zfp263 protein_coding processed_transcript MGP_BALBcJ_T0042842.1 MGP_BALBcJ_G0022415.1 mouse_genomes_project 16 183749 190145 + MGP_BALBcJ_P0042842 Zfp263 protein_coding protein_coding MGP_BALBcJ_T0042843.1 MGP_BALBcJ_G0022415.1 mouse_genomes_project 16 183971 188459 + Zfp263 protein_coding processed_transcript MGP_BALBcJ_T0011384.1 MGP_BALBcJ_G0009509.1 mouse_genomes_project 16 17075551 17075826 + Gm23332 misc_RNA misc_RNA MGP_BALBcJ_T0043813.1 MGP_BALBcJ_G0022640.1 mouse_genomes_project 16 19632935 19640336 + MGP_BALBcJ_P0043813 Ahsg protein_coding protein_coding MGP_BALBcJ_T0017462.1 MGP_BALBcJ_G0015258.1 mouse_genomes_project 16 52792938 52807881 + Gm28037 processed_transcript processed_transcript MGP_BALBcJ_T0043793.1 MGP_BALBcJ_G0022634.1 mouse_genomes_project 16 18969910 18997235 - MGP_BALBcJ_P0043793 Tra2b protein_coding protein_coding MGP_BALBcJ_T0043794.1 MGP_BALBcJ_G0022634.1 mouse_genomes_project 16 18972261 18982176 - Tra2b protein_coding retained_intron MGP_BALBcJ_T0043795.1 MGP_BALBcJ_G0022634.1 mouse_genomes_project 16 18985757 18990855 - Tra2b protein_coding processed_transcript MGP_BALBcJ_T0043796.1 MGP_BALBcJ_G0022634.1 mouse_genomes_project 16 18989296 18997148 - Tra2b protein_coding retained_intron MGP_BALBcJ_T0006845.1 MGP_BALBcJ_G0005639.1 mouse_genomes_project 16 56395279 56401542 - 1700022E09Rik lincRNA lincRNA MGP_BALBcJ_T0006846.1 MGP_BALBcJ_G0005639.1 mouse_genomes_project 16 56399243 56401576 - 1700022E09Rik lincRNA lincRNA MGP_BALBcJ_T0044595.1 MGP_BALBcJ_G0022839.1 mouse_genomes_project 16 45873519 46016085 + MGP_BALBcJ_P0044595 Myh15 protein_coding protein_coding MGP_BALBcJ_T0003629.1 MGP_BALBcJ_G0003286.1 mouse_genomes_project 16 1213067 1214008 + Gm15859 antisense antisense MGP_BALBcJ_T0006806.1 MGP_BALBcJ_G0005608.1 mouse_genomes_project 16 9377190 9413325 + 1700003L19Rik lincRNA lincRNA MGP_BALBcJ_T0010121.1 MGP_BALBcJ_G0008246.1 mouse_genomes_project 16 39085793 39085901 - Mir6540 miRNA miRNA MGP_BALBcJ_T0099536.1 MGP_BALBcJ_G0037572.1 mouse_genomes_project 16 44323131 44323238 - Gm24651 snRNA snRNA MGP_BALBcJ_T0045141.1 MGP_BALBcJ_G0023022.1 mouse_genomes_project 16 89291314 89320455 + MGP_BALBcJ_P0045141 Slc5a3 protein_coding protein_coding MGP_BALBcJ_T0045142.1 MGP_BALBcJ_G0023022.1 mouse_genomes_project 16 89311054 89316790 + MGP_BALBcJ_P0045142 Slc5a3 protein_coding protein_coding MGP_BALBcJ_T0044230.1 MGP_BALBcJ_G0022751.1 mouse_genomes_project 16 33131944 33140444 - MGP_BALBcJ_P0044230 protein_coding protein_coding MGP_BALBcJ_T0042867.1 MGP_BALBcJ_G0022422.1 mouse_genomes_project 16 357991 373076 + MGP_BALBcJ_P0042867 Cluap1 protein_coding protein_coding MGP_BALBcJ_T0042868.1 MGP_BALBcJ_G0022422.1 mouse_genomes_project 16 358015 390230 + MGP_BALBcJ_P0042868 Cluap1 protein_coding protein_coding MGP_BALBcJ_T0042869.1 MGP_BALBcJ_G0022422.1 mouse_genomes_project 16 358229 362763 + Cluap1 protein_coding retained_intron MGP_BALBcJ_T0042870.1 MGP_BALBcJ_G0022422.1 mouse_genomes_project 16 358266 379090 + MGP_BALBcJ_P0042870 Cluap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042871.1 MGP_BALBcJ_G0022422.1 mouse_genomes_project 16 358296 373132 + MGP_BALBcJ_P0042871 Cluap1 protein_coding protein_coding MGP_BALBcJ_T0043467.1 MGP_BALBcJ_G0022557.1 mouse_genomes_project 16 14422419 14480481 - MGP_BALBcJ_P0043467 Gm20518 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043070.1 MGP_BALBcJ_G0022473.1 mouse_genomes_project 16 6958297 6984968 - MGP_BALBcJ_P0043070 Tvp23a protein_coding protein_coding MGP_BALBcJ_T0043072.1 MGP_BALBcJ_G0022473.1 mouse_genomes_project 16 6960984 6984750 - MGP_BALBcJ_P0043072 Tvp23a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043073.1 MGP_BALBcJ_G0022473.1 mouse_genomes_project 16 6961951 6984933 - Tvp23a protein_coding processed_transcript MGP_BALBcJ_T0043074.1 MGP_BALBcJ_G0022473.1 mouse_genomes_project 16 6963593 6966791 - Tvp23a protein_coding processed_transcript MGP_BALBcJ_T0043075.1 MGP_BALBcJ_G0022473.1 mouse_genomes_project 16 6964769 6966867 - Tvp23a protein_coding processed_transcript MGP_BALBcJ_T0013144.1 MGP_BALBcJ_G0011241.1 mouse_genomes_project 16 42251154 42253069 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043942.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27285101 27325552 - MGP_BALBcJ_P0043942 Tmem44 protein_coding unknown_likely_coding MGP_BALBcJ_T0043943.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27286744 27324999 - Tmem44 protein_coding retained_intron MGP_BALBcJ_T0043944.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27286744 27325623 - MGP_BALBcJ_P0043944 Tmem44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043945.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27288571 27325631 - MGP_BALBcJ_P0043945 Tmem44 protein_coding protein_coding MGP_BALBcJ_T0043946.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27288573 27325631 - MGP_BALBcJ_P0043946 Tmem44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043947.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27288850 27316007 - MGP_BALBcJ_P0043947 Tmem44 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043948.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27292369 27325592 - Tmem44 protein_coding retained_intron MGP_BALBcJ_T0043949.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27292750 27325895 - Tmem44 protein_coding retained_intron MGP_BALBcJ_T0043950.1 MGP_BALBcJ_G0022680.1 mouse_genomes_project 16 27318810 27325581 - Tmem44 protein_coding processed_transcript MGP_BALBcJ_T0011386.1 MGP_BALBcJ_G0009511.1 mouse_genomes_project 16 20199019 20199333 - Gm23430 misc_RNA misc_RNA MGP_BALBcJ_T0013096.1 MGP_BALBcJ_G0011193.1 mouse_genomes_project 16 10599502 10600457 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043573.1 MGP_BALBcJ_G0022579.1 mouse_genomes_project 16 15098910 15101668 + MGP_BALBcJ_P0043573 Gm16314 protein_coding protein_coding MGP_BALBcJ_T0013129.1 MGP_BALBcJ_G0011226.1 mouse_genomes_project 16 29505359 29506299 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006805.1 MGP_BALBcJ_G0005607.1 mouse_genomes_project 16 7762367 7784796 + 2610020C07Rik lincRNA lincRNA MGP_BALBcJ_T0044839.1 MGP_BALBcJ_G0022924.1 mouse_genomes_project 16 72832962 72844594 - MGP_BALBcJ_P0044839 Hspa13 protein_coding protein_coding MGP_BALBcJ_T0044840.1 MGP_BALBcJ_G0022924.1 mouse_genomes_project 16 72834412 72844564 - MGP_BALBcJ_P0044840 Hspa13 protein_coding protein_coding MGP_BALBcJ_T0044841.1 MGP_BALBcJ_G0022924.1 mouse_genomes_project 16 72836960 72844555 - Hspa13 protein_coding retained_intron MGP_BALBcJ_T0098525.1 MGP_BALBcJ_G0036579.1 mouse_genomes_project 16 10557211 10557321 - Gm26213 rRNA rRNA MGP_BALBcJ_T0043287.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13432997 13448197 + MGP_BALBcJ_P0043287 Top3b protein_coding protein_coding MGP_BALBcJ_T0043288.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433018 13455333 + MGP_BALBcJ_P0043288 Top3b protein_coding protein_coding MGP_BALBcJ_T0043289.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433028 13441680 + MGP_BALBcJ_P0043289 Top3b protein_coding protein_coding MGP_BALBcJ_T0043290.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433035 13445881 + MGP_BALBcJ_P0043290 Top3b protein_coding protein_coding MGP_BALBcJ_T0043291.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433042 13455338 + MGP_BALBcJ_P0043291 Top3b protein_coding protein_coding MGP_BALBcJ_T0043292.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433047 13447814 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043293.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433048 13443004 + MGP_BALBcJ_P0043293 Top3b protein_coding protein_coding MGP_BALBcJ_T0043294.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433061 13441695 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043295.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433068 13441407 + MGP_BALBcJ_P0043295 Top3b protein_coding protein_coding MGP_BALBcJ_T0043296.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433078 13455338 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043297.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433101 13441342 + MGP_BALBcJ_P0043297 Top3b protein_coding protein_coding MGP_BALBcJ_T0043298.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13433226 13441822 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043299.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13445796 13455321 + MGP_BALBcJ_P0043299 Top3b protein_coding protein_coding MGP_BALBcJ_T0043300.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13446566 13455338 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043301.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13447873 13449054 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043302.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13448991 13450058 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043303.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13449257 13450235 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043304.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13450186 13455323 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043305.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13452573 13454848 + MGP_BALBcJ_P0043305 Top3b protein_coding protein_coding MGP_BALBcJ_T0043306.1 MGP_BALBcJ_G0022528.1 mouse_genomes_project 16 13453849 13454767 + Top3b protein_coding retained_intron MGP_BALBcJ_T0043818.1 MGP_BALBcJ_G0022642.1 mouse_genomes_project 16 19689839 19700975 + MGP_BALBcJ_P0043818 Hrg protein_coding protein_coding MGP_BALBcJ_T0043001.1 MGP_BALBcJ_G0022454.1 mouse_genomes_project 16 1703666 1714138 - MGP_BALBcJ_P0043001 AU021092 protein_coding protein_coding MGP_BALBcJ_T0000969.1 MGP_BALBcJ_G0000898.1 mouse_genomes_project 16 74782517 74784650 + TEC TEC MGP_BALBcJ_T0043355.1 MGP_BALBcJ_G0022539.1 mouse_genomes_project 16 13800284 13830063 + MGP_BALBcJ_P0043355 Hic2 protein_coding protein_coding MGP_BALBcJ_T0043356.1 MGP_BALBcJ_G0022539.1 mouse_genomes_project 16 13800376 13828228 + MGP_BALBcJ_P0043356 Hic2 protein_coding protein_coding MGP_BALBcJ_T0044680.1 MGP_BALBcJ_G0022860.1 mouse_genomes_project 16 53876390 53913201 - MGP_BALBcJ_P0044680 Tmem45a2 protein_coding protein_coding MGP_BALBcJ_T0098524.1 MGP_BALBcJ_G0036578.1 mouse_genomes_project 16 5403862 5403955 - Gm22224 rRNA rRNA MGP_BALBcJ_T0098527.1 MGP_BALBcJ_G0036581.1 mouse_genomes_project 16 26912873 26912976 - n-R5s32 rRNA rRNA MGP_BALBcJ_T0044966.1 MGP_BALBcJ_G0022982.1 mouse_genomes_project 16 86346915 86347404 + MGP_BALBcJ_P0044966 Gm6358 protein_coding protein_coding MGP_BALBcJ_T0044967.1 MGP_BALBcJ_G0022982.1 mouse_genomes_project 16 86347008 86347164 + MGP_BALBcJ_P0044967 Gm6358 protein_coding protein_coding MGP_BALBcJ_T0010128.1 MGP_BALBcJ_G0008253.1 mouse_genomes_project 16 52323405 52323472 + Mir5118 miRNA miRNA MGP_BALBcJ_T0000019.1 MGP_BALBcJ_G0000014.1 mouse_genomes_project 16 15820755 15821213 - MGP_BALBcJ_P0000019 Iglc2 IG_C_gene IG_C_gene MGP_BALBcJ_T0000020.1 MGP_BALBcJ_G0000014.1 mouse_genomes_project 16 15820760 15822711 - MGP_BALBcJ_P0000020 Iglc2 IG_C_gene IG_C_gene MGP_BALBcJ_T0013167.1 MGP_BALBcJ_G0011264.1 mouse_genomes_project 16 73213511 73214259 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000961.1 MGP_BALBcJ_G0000890.1 mouse_genomes_project 16 74512822 74515392 - TEC TEC MGP_BALBcJ_T0043783.1 MGP_BALBcJ_G0022631.1 mouse_genomes_project 16 18733263 18772040 + MGP_BALBcJ_P0043783 Senp2 protein_coding protein_coding MGP_BALBcJ_T0044580.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45743038 45758641 - Dzip3 protein_coding retained_intron MGP_BALBcJ_T0044581.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45743038 45810814 - MGP_BALBcJ_P0044581 Dzip3 protein_coding protein_coding MGP_BALBcJ_T0044582.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45743040 45758549 - Dzip3 protein_coding retained_intron MGP_BALBcJ_T0044583.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45744685 45810590 - MGP_BALBcJ_P0044583 Dzip3 protein_coding protein_coding MGP_BALBcJ_T0044584.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45745672 45748554 - MGP_BALBcJ_P0044584 Dzip3 protein_coding protein_coding MGP_BALBcJ_T0044585.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45745892 45750100 - Dzip3 protein_coding retained_intron MGP_BALBcJ_T0044586.1 MGP_BALBcJ_G0022837.1 mouse_genomes_project 16 45765798 45774234 - Dzip3 protein_coding retained_intron MGP_BALBcJ_T0013137.1 MGP_BALBcJ_G0011234.1 mouse_genomes_project 16 35626638 35627032 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013087.1 MGP_BALBcJ_G0011184.1 mouse_genomes_project 16 5148525 5149066 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006842.1 MGP_BALBcJ_G0005636.1 mouse_genomes_project 16 53730104 53733156 + lincRNA lincRNA MGP_BALBcJ_T0000122.1 MGP_BALBcJ_G0000093.1 mouse_genomes_project 16 15891682 15892141 - MGP_BALBcJ_P0000122 Iglv2 IG_V_gene IG_V_gene MGP_BALBcJ_T0000123.1 MGP_BALBcJ_G0000093.1 mouse_genomes_project 16 15891682 15892126 - MGP_BALBcJ_P0000123 Iglv2 IG_V_gene IG_V_gene MGP_BALBcJ_T0010130.1 MGP_BALBcJ_G0008255.1 mouse_genomes_project 16 55551592 55551688 - Gm27564 miRNA miRNA MGP_BALBcJ_T0010112.1 MGP_BALBcJ_G0008237.1 mouse_genomes_project 16 21625991 21626077 + Mir28a miRNA miRNA MGP_BALBcJ_T0044660.1 MGP_BALBcJ_G0022855.1 mouse_genomes_project 16 53039409 53110309 + MGP_BALBcJ_P0044660 Impg2 protein_coding protein_coding MGP_BALBcJ_T0044661.1 MGP_BALBcJ_G0022855.1 mouse_genomes_project 16 53039428 53048303 + Impg2 protein_coding processed_transcript MGP_BALBcJ_T0044662.1 MGP_BALBcJ_G0022855.1 mouse_genomes_project 16 53039434 53112905 + MGP_BALBcJ_P0044662 Impg2 protein_coding protein_coding MGP_BALBcJ_T0044663.1 MGP_BALBcJ_G0022855.1 mouse_genomes_project 16 53109338 53110189 + Impg2 protein_coding processed_transcript MGP_BALBcJ_T0102014.1 MGP_BALBcJ_G0039848.1 mouse_genomes_project 16 17065992 17073281 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0043223.1 MGP_BALBcJ_G0022509.1 mouse_genomes_project 16 10780450 10865009 - MGP_BALBcJ_P0043223 Myh11 protein_coding unknown_likely_coding MGP_BALBcJ_T0043224.1 MGP_BALBcJ_G0022509.1 mouse_genomes_project 16 10780451 10878474 - MGP_BALBcJ_P0043224 Myh11 protein_coding protein_coding MGP_BALBcJ_T0042972.1 MGP_BALBcJ_G0022445.1 mouse_genomes_project 16 1450319 1466304 + MGP_BALBcJ_P0042972 protein_coding protein_coding MGP_BALBcJ_T0045064.1 MGP_BALBcJ_G0023013.1 mouse_genomes_project 16 88794839 88818289 - MGP_BALBcJ_P0045064 Tmem50b protein_coding protein_coding MGP_BALBcJ_T0045065.1 MGP_BALBcJ_G0023013.1 mouse_genomes_project 16 88796094 88818153 - MGP_BALBcJ_P0045065 Tmem50b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045066.1 MGP_BALBcJ_G0023013.1 mouse_genomes_project 16 88800538 88818289 - MGP_BALBcJ_P0045066 Tmem50b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044177.1 MGP_BALBcJ_G0022731.1 mouse_genomes_project 16 31546723 31686541 + Mylk protein_coding retained_intron MGP_BALBcJ_T0044178.1 MGP_BALBcJ_G0022731.1 mouse_genomes_project 16 31586748 31806719 + MGP_BALBcJ_P0044178 Mylk protein_coding protein_coding MGP_BALBcJ_T0099512.1 MGP_BALBcJ_G0037548.1 mouse_genomes_project 16 17379327 17379492 + Gm22741 snRNA snRNA MGP_BALBcJ_T0100786.1 MGP_BALBcJ_G0038822.1 mouse_genomes_project 16 19886559 19886698 + Gm24616 snoRNA snoRNA MGP_BALBcJ_T0042872.1 MGP_BALBcJ_G0022423.1 mouse_genomes_project 16 394172 424970 - MGP_BALBcJ_P0042872 Nlrc3 protein_coding protein_coding MGP_BALBcJ_T0042873.1 MGP_BALBcJ_G0022423.1 mouse_genomes_project 16 394775 425057 - MGP_BALBcJ_P0042873 Nlrc3 protein_coding protein_coding MGP_BALBcJ_T0042874.1 MGP_BALBcJ_G0022423.1 mouse_genomes_project 16 397555 425057 - Nlrc3 protein_coding retained_intron MGP_BALBcJ_T0042875.1 MGP_BALBcJ_G0022423.1 mouse_genomes_project 16 397564 412817 - Nlrc3 protein_coding retained_intron MGP_BALBcJ_T0006816.1 MGP_BALBcJ_G0005615.1 mouse_genomes_project 16 18565334 18567660 - Gm26744 lincRNA lincRNA MGP_BALBcJ_T0006857.1 MGP_BALBcJ_G0005646.1 mouse_genomes_project 16 87934523 87937163 + Gm17518 lincRNA lincRNA MGP_BALBcJ_T0098526.1 MGP_BALBcJ_G0036580.1 mouse_genomes_project 16 12578104 12578214 - n-R5s31 rRNA rRNA MGP_BALBcJ_T0044514.1 MGP_BALBcJ_G0022815.1 mouse_genomes_project 16 41960318 41990023 + MGP_BALBcJ_P0044514 Atg3 protein_coding protein_coding MGP_BALBcJ_T0044515.1 MGP_BALBcJ_G0022815.1 mouse_genomes_project 16 41967394 41989378 + Atg3 protein_coding retained_intron MGP_BALBcJ_T0043636.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16897699 16924604 - MGP_BALBcJ_P0043636 Parl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043637.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16897699 16924646 - MGP_BALBcJ_P0043637 Parl protein_coding protein_coding MGP_BALBcJ_T0043638.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16897882 16901124 - Parl protein_coding retained_intron MGP_BALBcJ_T0043639.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16900623 16924599 - Parl protein_coding retained_intron MGP_BALBcJ_T0043640.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16903407 16906112 - Parl protein_coding retained_intron MGP_BALBcJ_T0043641.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16904801 16923588 - Parl protein_coding processed_transcript MGP_BALBcJ_T0043642.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16904827 16924613 - MGP_BALBcJ_P0043642 Parl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043643.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16915178 16920424 - Parl protein_coding retained_intron MGP_BALBcJ_T0043644.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16919855 16924072 - Parl protein_coding processed_transcript MGP_BALBcJ_T0043645.1 MGP_BALBcJ_G0022605.1 mouse_genomes_project 16 16920382 16924620 - Parl protein_coding retained_intron MGP_BALBcJ_T0043380.1 MGP_BALBcJ_G0022542.1 mouse_genomes_project 16 13899339 13911544 + MGP_BALBcJ_P0043380 Serpind1 protein_coding protein_coding MGP_BALBcJ_T0043381.1 MGP_BALBcJ_G0022542.1 mouse_genomes_project 16 13899351 13911543 + MGP_BALBcJ_P0043381 Serpind1 protein_coding protein_coding MGP_BALBcJ_T0010111.1 MGP_BALBcJ_G0008236.1 mouse_genomes_project 16 19885613 19885719 + miRNA miRNA MGP_BALBcJ_T0045195.1 MGP_BALBcJ_G0023039.1 mouse_genomes_project 16 91601768 91610193 + MGP_BALBcJ_P0045195 Ripply3 protein_coding protein_coding MGP_BALBcJ_T0003658.1 MGP_BALBcJ_G0003309.1 mouse_genomes_project 16 33139964 33159844 + Gm15845 antisense antisense MGP_BALBcJ_T0045268.1 MGP_BALBcJ_G0023047.1 mouse_genomes_project 16 92982543 93001635 + MGP_BALBcJ_P0045268 Ets2 protein_coding protein_coding MGP_BALBcJ_T0045269.1 MGP_BALBcJ_G0023047.1 mouse_genomes_project 16 92982923 92990798 + Ets2 protein_coding retained_intron MGP_BALBcJ_T0045270.1 MGP_BALBcJ_G0023047.1 mouse_genomes_project 16 92982968 92993199 + Ets2 protein_coding retained_intron MGP_BALBcJ_T0045271.1 MGP_BALBcJ_G0023047.1 mouse_genomes_project 16 92986796 92996656 + MGP_BALBcJ_P0045271 Ets2 protein_coding protein_coding MGP_BALBcJ_T0045272.1 MGP_BALBcJ_G0023047.1 mouse_genomes_project 16 92996437 92999706 + Ets2 protein_coding retained_intron MGP_BALBcJ_T0010100.1 MGP_BALBcJ_G0008225.1 mouse_genomes_project 16 14756817 14756899 - Mir6366 miRNA miRNA MGP_BALBcJ_T0044436.1 MGP_BALBcJ_G0022799.1 mouse_genomes_project 16 40769997 40802833 - MGP_BALBcJ_P0044436 Gramd1c protein_coding protein_coding MGP_BALBcJ_T0044437.1 MGP_BALBcJ_G0022799.1 mouse_genomes_project 16 40770002 40817642 - MGP_BALBcJ_P0044437 Gramd1c protein_coding protein_coding MGP_BALBcJ_T0044438.1 MGP_BALBcJ_G0022799.1 mouse_genomes_project 16 40770002 40806230 - MGP_BALBcJ_P0044438 Gramd1c protein_coding protein_coding MGP_BALBcJ_T0044439.1 MGP_BALBcJ_G0022799.1 mouse_genomes_project 16 40776736 40820058 - MGP_BALBcJ_P0044439 Gramd1c protein_coding unknown_likely_coding MGP_BALBcJ_T0003683.1 MGP_BALBcJ_G0003329.1 mouse_genomes_project 16 95304031 95306852 - C030010L15Rik antisense antisense MGP_BALBcJ_T0003684.1 MGP_BALBcJ_G0003329.1 mouse_genomes_project 16 95304093 95304574 - C030010L15Rik antisense antisense MGP_BALBcJ_T0043242.1 MGP_BALBcJ_G0022514.1 mouse_genomes_project 16 11280228 11283790 + MGP_BALBcJ_P0043242 Snai2 protein_coding protein_coding MGP_BALBcJ_T0044681.1 MGP_BALBcJ_G0022861.1 mouse_genomes_project 16 53961379 53994596 + MGP_BALBcJ_P0044681 Tomm70a protein_coding protein_coding MGP_BALBcJ_T0011396.1 MGP_BALBcJ_G0009521.1 mouse_genomes_project 16 90920106 90920387 + Gm22344 misc_RNA misc_RNA MGP_BALBcJ_T0043508.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14841887 14846711 + Trmt2a protein_coding retained_intron MGP_BALBcJ_T0043509.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14842091 14846711 + MGP_BALBcJ_P0043509 Trmt2a protein_coding protein_coding MGP_BALBcJ_T0043510.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14842091 14847981 + MGP_BALBcJ_P0043510 Trmt2a protein_coding protein_coding MGP_BALBcJ_T0043511.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14842210 14846711 + Trmt2a protein_coding retained_intron MGP_BALBcJ_T0043512.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14842217 14846717 + Trmt2a protein_coding retained_intron MGP_BALBcJ_T0043513.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14842217 14846707 + Trmt2a protein_coding retained_intron MGP_BALBcJ_T0043514.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14842270 14846711 + MGP_BALBcJ_P0043514 Trmt2a protein_coding protein_coding MGP_BALBcJ_T0043515.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14843229 14846321 + MGP_BALBcJ_P0043515 Trmt2a protein_coding protein_coding MGP_BALBcJ_T0043516.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14844630 14846710 + MGP_BALBcJ_P0043516 Trmt2a protein_coding protein_coding MGP_BALBcJ_T0043517.1 MGP_BALBcJ_G0022572.1 mouse_genomes_project 16 14845429 14846440 + Trmt2a protein_coding retained_intron MGP_BALBcJ_T0100820.1 MGP_BALBcJ_G0038856.1 mouse_genomes_project 16 84597739 84597875 - Gm25896 snoRNA snoRNA MGP_BALBcJ_T0044683.1 MGP_BALBcJ_G0022863.1 mouse_genomes_project 16 54009444 54064939 - MGP_BALBcJ_P0044683 Tbc1d23 protein_coding unknown_likely_coding MGP_BALBcJ_T0044684.1 MGP_BALBcJ_G0022863.1 mouse_genomes_project 16 54009449 54065039 - MGP_BALBcJ_P0044684 Tbc1d23 protein_coding protein_coding MGP_BALBcJ_T0044942.1 MGP_BALBcJ_G0022961.1 mouse_genomes_project 16 85944847 85945729 - MGP_BALBcJ_P0044942 Krtap13 protein_coding protein_coding MGP_BALBcJ_T0099545.1 MGP_BALBcJ_G0037581.1 mouse_genomes_project 16 70467724 70467891 - Gm25699 snRNA snRNA MGP_BALBcJ_T0098523.1 MGP_BALBcJ_G0036577.1 mouse_genomes_project 16 1814190 1814312 - n-R5s30 rRNA rRNA MGP_BALBcJ_T0100799.1 MGP_BALBcJ_G0038835.1 mouse_genomes_project 16 43045293 43045425 + Gm26297 snoRNA snoRNA MGP_BALBcJ_T0044693.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55212703 55272485 + MGP_BALBcJ_P0044693 Dcbld2 protein_coding protein_coding MGP_BALBcJ_T0044694.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55257980 55268136 + Dcbld2 protein_coding processed_transcript MGP_BALBcJ_T0044695.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55258635 55259336 + Dcbld2 protein_coding processed_transcript MGP_BALBcJ_T0044696.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55259166 55266579 + Dcbld2 protein_coding retained_intron MGP_BALBcJ_T0044697.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55263014 55268585 + Dcbld2 protein_coding processed_transcript MGP_BALBcJ_T0044698.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55263058 55269482 + Dcbld2 protein_coding retained_intron MGP_BALBcJ_T0044699.1 MGP_BALBcJ_G0022868.1 mouse_genomes_project 16 55263060 55269545 + Dcbld2 protein_coding retained_intron MGP_BALBcJ_T0044776.1 MGP_BALBcJ_G0022903.1 mouse_genomes_project 16 56587415 57541176 - MGP_BALBcJ_P0044776 Epha6 protein_coding protein_coding MGP_BALBcJ_T0044777.1 MGP_BALBcJ_G0022903.1 mouse_genomes_project 16 56600450 56988049 - MGP_BALBcJ_P0044777 Epha6 protein_coding protein_coding MGP_BALBcJ_T0044778.1 MGP_BALBcJ_G0022903.1 mouse_genomes_project 16 57369229 57541459 - Epha6 protein_coding retained_intron MGP_BALBcJ_T0044779.1 MGP_BALBcJ_G0022903.1 mouse_genomes_project 16 57417325 57541147 - Epha6 protein_coding processed_transcript MGP_BALBcJ_T0100800.1 MGP_BALBcJ_G0038836.1 mouse_genomes_project 16 48920096 48920229 - Gm23513 snoRNA snoRNA MGP_BALBcJ_T0003644.1 MGP_BALBcJ_G0003300.1 mouse_genomes_project 16 28206287 28206703 - Gm15743 antisense antisense MGP_BALBcJ_T0003645.1 MGP_BALBcJ_G0003300.1 mouse_genomes_project 16 28206287 28208187 - Gm15743 antisense antisense MGP_BALBcJ_T0044759.1 MGP_BALBcJ_G0022897.1 mouse_genomes_project 16 56259685 56260690 - MGP_BALBcJ_P0044759 Olfr206 protein_coding protein_coding MGP_BALBcJ_T0044768.1 MGP_BALBcJ_G0022901.1 mouse_genomes_project 16 56423293 56457207 - Crybg3 protein_coding retained_intron MGP_BALBcJ_T0044769.1 MGP_BALBcJ_G0022901.1 mouse_genomes_project 16 56424615 56488893 - MGP_BALBcJ_P0044769 Crybg3 protein_coding protein_coding MGP_BALBcJ_T0044770.1 MGP_BALBcJ_G0022901.1 mouse_genomes_project 16 56458103 56472255 - Crybg3 protein_coding processed_transcript MGP_BALBcJ_T0044771.1 MGP_BALBcJ_G0022901.1 mouse_genomes_project 16 56476446 56487111 - MGP_BALBcJ_P0044771 Crybg3 protein_coding protein_coding MGP_BALBcJ_T0006801.1 MGP_BALBcJ_G0005603.1 mouse_genomes_project 16 7368429 7374013 + Gm26822 lincRNA lincRNA MGP_BALBcJ_T0044383.1 MGP_BALBcJ_G0022789.1 mouse_genomes_project 16 35624863 35642586 - MGP_BALBcJ_P0044383 4930435E12Rik protein_coding protein_coding MGP_BALBcJ_T0044384.1 MGP_BALBcJ_G0022789.1 mouse_genomes_project 16 35637791 35642568 - 4930435E12Rik protein_coding retained_intron MGP_BALBcJ_T0044756.1 MGP_BALBcJ_G0022894.1 mouse_genomes_project 16 56207206 56208130 - MGP_BALBcJ_P0044756 Olfr202 protein_coding protein_coding MGP_BALBcJ_T0099537.1 MGP_BALBcJ_G0037573.1 mouse_genomes_project 16 45763255 45763359 - Gm22576 snRNA snRNA MGP_BALBcJ_T0099546.1 MGP_BALBcJ_G0037582.1 mouse_genomes_project 16 77785468 77785567 + Gm24773 snRNA snRNA MGP_BALBcJ_T0006802.1 MGP_BALBcJ_G0005604.1 mouse_genomes_project 16 7454209 7456995 - Gm21859 lincRNA lincRNA MGP_BALBcJ_T0006813.1 MGP_BALBcJ_G0005614.1 mouse_genomes_project 16 18515338 18527269 + 1300002E11Rik lincRNA lincRNA MGP_BALBcJ_T0006814.1 MGP_BALBcJ_G0005614.1 mouse_genomes_project 16 18515353 18530365 + 1300002E11Rik lincRNA lincRNA MGP_BALBcJ_T0006815.1 MGP_BALBcJ_G0005614.1 mouse_genomes_project 16 18515383 18527269 + 1300002E11Rik lincRNA lincRNA MGP_BALBcJ_T0042982.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1495907 1501262 - MGP_BALBcJ_P0042982 Rogdi protein_coding protein_coding MGP_BALBcJ_T0042983.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1495907 1501272 - MGP_BALBcJ_P0042983 Rogdi protein_coding protein_coding MGP_BALBcJ_T0042984.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1495932 1501262 - MGP_BALBcJ_P0042984 Rogdi protein_coding protein_coding MGP_BALBcJ_T0042985.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1496162 1498406 - Rogdi protein_coding retained_intron MGP_BALBcJ_T0042986.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1496401 1497863 - Rogdi protein_coding retained_intron MGP_BALBcJ_T0042987.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1497652 1499569 - Rogdi protein_coding retained_intron MGP_BALBcJ_T0042988.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1497789 1499486 - Rogdi protein_coding retained_intron MGP_BALBcJ_T0042989.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1498601 1501230 - MGP_BALBcJ_P0042989 Rogdi protein_coding protein_coding MGP_BALBcJ_T0042990.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1499453 1501298 - Rogdi protein_coding retained_intron MGP_BALBcJ_T0042991.1 MGP_BALBcJ_G0022448.1 mouse_genomes_project 16 1499914 1501281 - Rogdi protein_coding retained_intron MGP_BALBcJ_T0044793.1 MGP_BALBcJ_G0022908.1 mouse_genomes_project 16 60486298 60811765 - MGP_BALBcJ_P0044793 Epha3 protein_coding protein_coding MGP_BALBcJ_T0043417.1 MGP_BALBcJ_G0022550.1 mouse_genomes_project 16 14155004 14158720 - Slc7a4 protein_coding retained_intron MGP_BALBcJ_T0043418.1 MGP_BALBcJ_G0022550.1 mouse_genomes_project 16 14155325 14158726 - MGP_BALBcJ_P0043418 Slc7a4 protein_coding protein_coding MGP_BALBcJ_T0043419.1 MGP_BALBcJ_G0022550.1 mouse_genomes_project 16 14157451 14158680 - MGP_BALBcJ_P0043419 Slc7a4 protein_coding protein_coding MGP_BALBcJ_T0043420.1 MGP_BALBcJ_G0022550.1 mouse_genomes_project 16 14157561 14158269 - MGP_BALBcJ_P0043420 Slc7a4 protein_coding protein_coding MGP_BALBcJ_T0043421.1 MGP_BALBcJ_G0022550.1 mouse_genomes_project 16 14157737 14158720 - MGP_BALBcJ_P0043421 Slc7a4 protein_coding protein_coding MGP_BALBcJ_T0044975.1 MGP_BALBcJ_G0022990.1 mouse_genomes_project 16 86679567 86680146 - MGP_BALBcJ_P0044975 Krtap8-1 protein_coding protein_coding MGP_BALBcJ_T0044800.1 MGP_BALBcJ_G0022913.1 mouse_genomes_project 16 61890802 62059884 - MGP_BALBcJ_P0044800 Htr1f protein_coding protein_coding MGP_BALBcJ_T0044226.1 MGP_BALBcJ_G0022747.1 mouse_genomes_project 16 32975327 32997851 + MGP_BALBcJ_P0044226 Stfa2 protein_coding protein_coding MGP_BALBcJ_T0044940.1 MGP_BALBcJ_G0022959.1 mouse_genomes_project 16 85900756 85901550 - MGP_BALBcJ_P0044940 2310061N02Rik protein_coding protein_coding MGP_BALBcJ_T0044969.1 MGP_BALBcJ_G0022984.1 mouse_genomes_project 16 86362542 86362939 + MGP_BALBcJ_P0044969 Gm9789 protein_coding protein_coding MGP_BALBcJ_T0044956.1 MGP_BALBcJ_G0022973.1 mouse_genomes_project 16 86123070 86123531 - MGP_BALBcJ_P0044956 Krtap19-9b protein_coding protein_coding MGP_BALBcJ_T0000040.1 MGP_BALBcJ_G0000032.1 mouse_genomes_project 16 15680194 15680232 - MGP_BALBcJ_P0000040 Iglj1 IG_J_gene IG_J_gene MGP_BALBcJ_T0010114.1 MGP_BALBcJ_G0008239.1 mouse_genomes_project 16 28040547 28040642 + Gm27415 miRNA miRNA MGP_BALBcJ_T0043628.1 MGP_BALBcJ_G0022601.1 mouse_genomes_project 16 16569889 16606165 - MGP_BALBcJ_P0043628 Klhl6 protein_coding protein_coding MGP_BALBcJ_T0043629.1 MGP_BALBcJ_G0022601.1 mouse_genomes_project 16 16580199 16589559 - Klhl6 protein_coding retained_intron MGP_BALBcJ_T0043630.1 MGP_BALBcJ_G0022601.1 mouse_genomes_project 16 16580219 16606135 - MGP_BALBcJ_P0043630 Klhl6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043631.1 MGP_BALBcJ_G0022601.1 mouse_genomes_project 16 16589283 16606058 - MGP_BALBcJ_P0043631 Klhl6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042844.1 MGP_BALBcJ_G0022416.1 mouse_genomes_project 16 287984 288923 + MGP_BALBcJ_P0042844 Olfr15 protein_coding protein_coding MGP_BALBcJ_T0044997.1 MGP_BALBcJ_G0022997.1 mouse_genomes_project 16 87925149 87934416 - Mis18a protein_coding retained_intron MGP_BALBcJ_T0044998.1 MGP_BALBcJ_G0022997.1 mouse_genomes_project 16 87925149 87934416 - MGP_BALBcJ_P0044998 Mis18a protein_coding protein_coding MGP_BALBcJ_T0044999.1 MGP_BALBcJ_G0022997.1 mouse_genomes_project 16 87927284 87934151 - Mis18a protein_coding retained_intron MGP_BALBcJ_T0043894.1 MGP_BALBcJ_G0022666.1 mouse_genomes_project 16 24138994 24158570 - MGP_BALBcJ_P0043894 Uts2b protein_coding protein_coding MGP_BALBcJ_T0045170.1 MGP_BALBcJ_G0023032.1 mouse_genomes_project 16 90956959 90964634 + MGP_BALBcJ_P0045170 Cbr3 protein_coding protein_coding MGP_BALBcJ_T0043225.1 MGP_BALBcJ_G0022510.1 mouse_genomes_project 16 10886810 10904859 - Fopnl protein_coding processed_transcript MGP_BALBcJ_T0043226.1 MGP_BALBcJ_G0022510.1 mouse_genomes_project 16 10887498 10904848 - MGP_BALBcJ_P0043226 Fopnl protein_coding protein_coding MGP_BALBcJ_T0013113.1 MGP_BALBcJ_G0011210.1 mouse_genomes_project 16 17184395 17184678 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006810.1 MGP_BALBcJ_G0005611.1 mouse_genomes_project 16 13821723 13826959 - Gm26635 lincRNA lincRNA MGP_BALBcJ_T0013172.1 MGP_BALBcJ_G0011269.1 mouse_genomes_project 16 88125226 88125778 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013153.1 MGP_BALBcJ_G0011250.1 mouse_genomes_project 16 46112066 46113276 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006864.1 MGP_BALBcJ_G0005651.1 mouse_genomes_project 16 93115362 93180408 - 1600002D24Rik lincRNA lincRNA MGP_BALBcJ_T0006865.1 MGP_BALBcJ_G0005651.1 mouse_genomes_project 16 93126125 93208503 - 1600002D24Rik lincRNA lincRNA MGP_BALBcJ_T0013105.1 MGP_BALBcJ_G0011202.1 mouse_genomes_project 16 14300081 14300519 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044572.1 MGP_BALBcJ_G0022830.1 mouse_genomes_project 16 45103029 45113477 + MGP_BALBcJ_P0044572 Dppa4 protein_coding protein_coding MGP_BALBcJ_T0044573.1 MGP_BALBcJ_G0022830.1 mouse_genomes_project 16 45103029 45113477 + MGP_BALBcJ_P0044573 Dppa4 protein_coding protein_coding MGP_BALBcJ_T0042846.1 MGP_BALBcJ_G0022418.1 mouse_genomes_project 16 307164 314668 - Zfp597 protein_coding processed_transcript MGP_BALBcJ_T0042847.1 MGP_BALBcJ_G0022418.1 mouse_genomes_project 16 310371 320946 - MGP_BALBcJ_P0042847 Zfp597 protein_coding protein_coding MGP_BALBcJ_T0042848.1 MGP_BALBcJ_G0022418.1 mouse_genomes_project 16 311227 333654 - Zfp597 protein_coding processed_transcript MGP_BALBcJ_T0042849.1 MGP_BALBcJ_G0022418.1 mouse_genomes_project 16 314133 333710 - Zfp597 protein_coding processed_transcript MGP_BALBcJ_T0042850.1 MGP_BALBcJ_G0022418.1 mouse_genomes_project 16 315432 320283 - Zfp597 protein_coding retained_intron MGP_BALBcJ_T0043051.1 MGP_BALBcJ_G0022466.1 mouse_genomes_project 16 5360931 5389702 + MGP_BALBcJ_P0043051 1810013L24Rik protein_coding protein_coding MGP_BALBcJ_T0044220.1 MGP_BALBcJ_G0022744.1 mouse_genomes_project 16 32857328 32885388 - MGP_BALBcJ_P0044220 Fam162a protein_coding protein_coding MGP_BALBcJ_T0013154.1 MGP_BALBcJ_G0011251.1 mouse_genomes_project 16 46112066 46112936 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044577.1 MGP_BALBcJ_G0022834.1 mouse_genomes_project 16 45641326 45643362 + MGP_BALBcJ_P0044577 Retnlb protein_coding protein_coding MGP_BALBcJ_T0010140.1 MGP_BALBcJ_G0008265.1 mouse_genomes_project 16 75149727 75149838 + Gm25025 miRNA miRNA MGP_BALBcJ_T0044235.1 MGP_BALBcJ_G0022753.1 mouse_genomes_project 16 33188691 33193409 - MGP_BALBcJ_P0044235 Stfa2l1 protein_coding protein_coding MGP_BALBcJ_T0043106.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7621263 7688122 - MGP_BALBcJ_P0043106 Txndc11 protein_coding protein_coding MGP_BALBcJ_T0043107.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7621777 7631134 - Txndc11 protein_coding retained_intron MGP_BALBcJ_T0043108.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7631100 7633701 - Txndc11 protein_coding processed_transcript MGP_BALBcJ_T0043109.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7631867 7688083 - MGP_BALBcJ_P0043109 Txndc11 protein_coding protein_coding MGP_BALBcJ_T0043110.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7633583 7688045 - MGP_BALBcJ_P0043110 Txndc11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043111.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7634620 7675879 - Txndc11 protein_coding processed_transcript MGP_BALBcJ_T0043112.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7650959 7688025 - MGP_BALBcJ_P0043112 Txndc11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043113.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7652305 7688122 - MGP_BALBcJ_P0043113 Txndc11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043114.1 MGP_BALBcJ_G0022486.1 mouse_genomes_project 16 7662983 7688085 - MGP_BALBcJ_P0043114 Txndc11 protein_coding protein_coding MGP_BALBcJ_T0043577.1 MGP_BALBcJ_G0022581.1 mouse_genomes_project 16 15223199 15225284 - MGP_BALBcJ_P0043577 Gp1bb protein_coding protein_coding MGP_BALBcJ_T0043578.1 MGP_BALBcJ_G0022581.1 mouse_genomes_project 16 15223602 15224247 - MGP_BALBcJ_P0043578 Gp1bb protein_coding protein_coding MGP_BALBcJ_T0043337.1 MGP_BALBcJ_G0022534.1 mouse_genomes_project 16 13695056 13697302 - MGP_BALBcJ_P0043337 Sdf2l1 protein_coding protein_coding MGP_BALBcJ_T0044973.1 MGP_BALBcJ_G0022988.1 mouse_genomes_project 16 86598623 86599371 - MGP_BALBcJ_P0044973 Krtap21-1 protein_coding protein_coding MGP_BALBcJ_T0044548.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42571357 42668880 - MGP_BALBcJ_P0044548 Phldb2 protein_coding protein_coding MGP_BALBcJ_T0044549.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42571508 42668736 - MGP_BALBcJ_P0044549 Phldb2 protein_coding protein_coding MGP_BALBcJ_T0044550.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42572271 42624733 - MGP_BALBcJ_P0044550 Phldb2 protein_coding protein_coding MGP_BALBcJ_T0044551.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42579909 42780359 - MGP_BALBcJ_P0044551 Phldb2 protein_coding protein_coding MGP_BALBcJ_T0044552.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42585372 42594928 - Phldb2 protein_coding processed_transcript MGP_BALBcJ_T0044553.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42600357 42612277 - Phldb2 protein_coding processed_transcript MGP_BALBcJ_T0044554.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42602964 42614620 - MGP_BALBcJ_P0044554 Phldb2 protein_coding protein_coding MGP_BALBcJ_T0044555.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42649137 42780254 - MGP_BALBcJ_P0044555 Phldb2 protein_coding protein_coding MGP_BALBcJ_T0044556.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42649306 42668845 - Phldb2 protein_coding processed_transcript MGP_BALBcJ_T0044557.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42725560 42726487 - Phldb2 protein_coding processed_transcript MGP_BALBcJ_T0044558.1 MGP_BALBcJ_G0022825.1 mouse_genomes_project 16 42725751 42780294 - Phldb2 protein_coding processed_transcript MGP_BALBcJ_T0011390.1 MGP_BALBcJ_G0009515.1 mouse_genomes_project 16 44412920 44413234 - Gm25318 misc_RNA misc_RNA MGP_BALBcJ_T0044543.1 MGP_BALBcJ_G0022824.1 mouse_genomes_project 16 42555119 42568136 - MGP_BALBcJ_P0044543 Abhd10 protein_coding protein_coding MGP_BALBcJ_T0044544.1 MGP_BALBcJ_G0022824.1 mouse_genomes_project 16 42556942 42568083 - MGP_BALBcJ_P0044544 Abhd10 protein_coding protein_coding MGP_BALBcJ_T0044545.1 MGP_BALBcJ_G0022824.1 mouse_genomes_project 16 42562166 42568066 - Abhd10 protein_coding processed_transcript MGP_BALBcJ_T0044546.1 MGP_BALBcJ_G0022824.1 mouse_genomes_project 16 42565529 42568088 - Abhd10 protein_coding processed_transcript MGP_BALBcJ_T0044547.1 MGP_BALBcJ_G0022824.1 mouse_genomes_project 16 42566036 42568081 - Abhd10 protein_coding processed_transcript MGP_BALBcJ_T0044361.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35375300 35407795 + MGP_BALBcJ_P0044361 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044362.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35379428 35408767 + MGP_BALBcJ_P0044362 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044363.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35379428 35408767 + MGP_BALBcJ_P0044363 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044364.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35379477 35402862 + MGP_BALBcJ_P0044364 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044365.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35379502 35389807 + Tmem39a protein_coding processed_transcript MGP_BALBcJ_T0044366.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35380805 35398605 + MGP_BALBcJ_P0044366 Tmem39a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044367.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35392058 35402030 + Tmem39a protein_coding retained_intron MGP_BALBcJ_T0044368.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35392381 35408047 + MGP_BALBcJ_P0044368 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044369.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35398713 35407547 + MGP_BALBcJ_P0044369 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044370.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35402020 35403495 + Tmem39a protein_coding retained_intron MGP_BALBcJ_T0044371.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35402097 35403244 + Tmem39a protein_coding retained_intron MGP_BALBcJ_T0044372.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35402112 35407750 + MGP_BALBcJ_P0044372 Tmem39a protein_coding protein_coding MGP_BALBcJ_T0044373.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35403815 35407951 + Tmem39a protein_coding processed_transcript MGP_BALBcJ_T0044374.1 MGP_BALBcJ_G0022785.1 mouse_genomes_project 16 35404643 35407911 + Tmem39a protein_coding retained_intron MGP_BALBcJ_T0044233.1 MGP_BALBcJ_G0022752.1 mouse_genomes_project 16 33158848 33163617 - MGP_BALBcJ_P0044233 2010005H15Rik protein_coding protein_coding MGP_BALBcJ_T0044234.1 MGP_BALBcJ_G0022752.1 mouse_genomes_project 16 33158903 33163585 - MGP_BALBcJ_P0044234 2010005H15Rik protein_coding protein_coding MGP_BALBcJ_T0043891.1 MGP_BALBcJ_G0022664.1 mouse_genomes_project 16 23743283 23775906 - MGP_BALBcJ_P0043891 Gmnc protein_coding protein_coding MGP_BALBcJ_T0043892.1 MGP_BALBcJ_G0022664.1 mouse_genomes_project 16 23746299 23753887 - MGP_BALBcJ_P0043892 Gmnc protein_coding unknown_likely_coding MGP_BALBcJ_T0044950.1 MGP_BALBcJ_G0022967.1 mouse_genomes_project 16 86059838 86060331 - MGP_BALBcJ_P0044950 Krtap19-1 protein_coding protein_coding MGP_BALBcJ_T0006836.1 MGP_BALBcJ_G0005634.1 mouse_genomes_project 16 47553846 47567942 - Dubr lincRNA lincRNA MGP_BALBcJ_T0006837.1 MGP_BALBcJ_G0005634.1 mouse_genomes_project 16 47553851 47567852 - Dubr lincRNA lincRNA MGP_BALBcJ_T0006838.1 MGP_BALBcJ_G0005634.1 mouse_genomes_project 16 47561910 47567906 - Dubr lincRNA lincRNA MGP_BALBcJ_T0006839.1 MGP_BALBcJ_G0005634.1 mouse_genomes_project 16 47562595 47567857 - Dubr lincRNA lincRNA MGP_BALBcJ_T0042935.1 MGP_BALBcJ_G0022435.1 mouse_genomes_project 16 1120209 1131080 + MGP_BALBcJ_P0042935 Vasn protein_coding protein_coding MGP_BALBcJ_T0042936.1 MGP_BALBcJ_G0022435.1 mouse_genomes_project 16 1120236 1127837 + Vasn protein_coding processed_transcript MGP_BALBcJ_T0011388.1 MGP_BALBcJ_G0009513.1 mouse_genomes_project 16 37860539 37860690 - Gm27717 misc_RNA misc_RNA MGP_BALBcJ_T0003681.1 MGP_BALBcJ_G0003327.1 mouse_genomes_project 16 93390824 93408209 + Gm15341 antisense antisense MGP_BALBcJ_T0000966.1 MGP_BALBcJ_G0000895.1 mouse_genomes_project 16 74711275 74713299 + TEC TEC MGP_BALBcJ_T0044321.1 MGP_BALBcJ_G0022770.1 mouse_genomes_project 16 34583154 34642248 + MGP_BALBcJ_P0044321 Fstl1 protein_coding protein_coding MGP_BALBcJ_T0044322.1 MGP_BALBcJ_G0022770.1 mouse_genomes_project 16 34583356 34600802 + Fstl1 protein_coding processed_transcript MGP_BALBcJ_T0044323.1 MGP_BALBcJ_G0022770.1 mouse_genomes_project 16 34583433 34624702 + Fstl1 protein_coding retained_intron MGP_BALBcJ_T0044324.1 MGP_BALBcJ_G0022770.1 mouse_genomes_project 16 34621453 34640157 + Fstl1 protein_coding processed_transcript MGP_BALBcJ_T0044325.1 MGP_BALBcJ_G0022770.1 mouse_genomes_project 16 34628477 34641355 + Fstl1 protein_coding processed_transcript MGP_BALBcJ_T0013159.1 MGP_BALBcJ_G0011256.1 mouse_genomes_project 16 57564300 57565236 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000971.1 MGP_BALBcJ_G0000900.1 mouse_genomes_project 16 88465942 88466743 + TEC TEC MGP_BALBcJ_T0000942.1 MGP_BALBcJ_G0000873.1 mouse_genomes_project 16 358015 358383 - TEC TEC MGP_BALBcJ_T0000943.1 MGP_BALBcJ_G0000873.1 mouse_genomes_project 16 358047 358383 - TEC TEC MGP_BALBcJ_T0043094.1 MGP_BALBcJ_G0022479.1 mouse_genomes_project 16 7330960 7331370 - MGP_BALBcJ_P0043094 Prm3 protein_coding protein_coding MGP_BALBcJ_T0044717.1 MGP_BALBcJ_G0022873.1 mouse_genomes_project 16 55517236 55518526 - MGP_BALBcJ_P0044717 Gpr15 protein_coding protein_coding MGP_BALBcJ_T0043098.1 MGP_BALBcJ_G0022482.1 mouse_genomes_project 16 7353774 7353854 + MGP_BALBcJ_P0043098 Gm11172 protein_coding protein_coding MGP_BALBcJ_T0044434.1 MGP_BALBcJ_G0022798.1 mouse_genomes_project 16 40758711 40768741 - MGP_BALBcJ_P0044434 Zdhhc23 protein_coding protein_coding MGP_BALBcJ_T0044435.1 MGP_BALBcJ_G0022798.1 mouse_genomes_project 16 40758779 40768698 - MGP_BALBcJ_P0044435 Zdhhc23 protein_coding protein_coding MGP_BALBcJ_T0013146.1 MGP_BALBcJ_G0011243.1 mouse_genomes_project 16 42266653 42269625 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043995.1 MGP_BALBcJ_G0022690.1 mouse_genomes_project 16 28715079 28727463 + MGP_BALBcJ_P0043995 Pigz protein_coding protein_coding MGP_BALBcJ_T0043996.1 MGP_BALBcJ_G0022690.1 mouse_genomes_project 16 28715171 28725765 + Pigz protein_coding processed_transcript MGP_BALBcJ_T0043997.1 MGP_BALBcJ_G0022690.1 mouse_genomes_project 16 28715210 28724040 + Pigz protein_coding processed_transcript MGP_BALBcJ_T0043998.1 MGP_BALBcJ_G0022690.1 mouse_genomes_project 16 28723387 28724036 + Pigz protein_coding processed_transcript MGP_BALBcJ_T0006804.1 MGP_BALBcJ_G0005606.1 mouse_genomes_project 16 7732018 7751363 + 4930509G22Rik lincRNA lincRNA MGP_BALBcJ_T0044417.1 MGP_BALBcJ_G0022795.1 mouse_genomes_project 16 40545416 40611965 + MGP_BALBcJ_P0044417 Drd3 protein_coding protein_coding MGP_BALBcJ_T0003655.1 MGP_BALBcJ_G0003308.1 mouse_genomes_project 16 32779555 32793856 - Gm15564 antisense antisense MGP_BALBcJ_T0003656.1 MGP_BALBcJ_G0003308.1 mouse_genomes_project 16 32779556 32796286 - Gm15564 antisense antisense MGP_BALBcJ_T0003657.1 MGP_BALBcJ_G0003308.1 mouse_genomes_project 16 32779578 32793916 - Gm15564 antisense antisense MGP_BALBcJ_T0098331.1 MGP_BALBcJ_G0036385.1 mouse_genomes_project 16 28729440 28729865 - pseudogene pseudogene MGP_BALBcJ_T0100813.1 MGP_BALBcJ_G0038849.1 mouse_genomes_project 16 71675333 71675479 + Gm26307 snoRNA snoRNA MGP_BALBcJ_T0045352.1 MGP_BALBcJ_G0023067.1 mouse_genomes_project 16 95316768 95317930 + protein_coding retained_intron MGP_BALBcJ_T0006819.1 MGP_BALBcJ_G0005618.1 mouse_genomes_project 16 21856930 21866346 + A230028O05Rik lincRNA lincRNA MGP_BALBcJ_T0045000.1 MGP_BALBcJ_G0022998.1 mouse_genomes_project 16 87946263 87955082 + Mrap protein_coding processed_transcript MGP_BALBcJ_T0045001.1 MGP_BALBcJ_G0022998.1 mouse_genomes_project 16 87946263 87958328 + Mrap protein_coding processed_transcript MGP_BALBcJ_T0045002.1 MGP_BALBcJ_G0022998.1 mouse_genomes_project 16 87946263 87957839 + Mrap protein_coding processed_transcript MGP_BALBcJ_T0045003.1 MGP_BALBcJ_G0022998.1 mouse_genomes_project 16 87946263 87958328 + MGP_BALBcJ_P0045003 Mrap protein_coding protein_coding MGP_BALBcJ_T0043081.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085736 7285153 + MGP_BALBcJ_P0043081 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043082.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085736 7285153 + MGP_BALBcJ_P0043082 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043083.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085761 7285153 + MGP_BALBcJ_P0043083 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043084.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085774 7103839 + Clec16a protein_coding processed_transcript MGP_BALBcJ_T0043085.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085795 7262392 + MGP_BALBcJ_P0043085 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043086.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085806 7235955 + MGP_BALBcJ_P0043086 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043087.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085806 7281813 + MGP_BALBcJ_P0043087 Clec16a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043088.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7085806 7100136 + MGP_BALBcJ_P0043088 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043089.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7141022 7282454 + MGP_BALBcJ_P0043089 Clec16a protein_coding protein_coding MGP_BALBcJ_T0043090.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7151596 7172114 + Clec16a protein_coding processed_transcript MGP_BALBcJ_T0043091.1 MGP_BALBcJ_G0022476.1 mouse_genomes_project 16 7171372 7180928 + Clec16a protein_coding processed_transcript MGP_BALBcJ_T0045148.1 MGP_BALBcJ_G0023025.1 mouse_genomes_project 16 89551543 89554222 - MGP_BALBcJ_P0045148 4930563D23Rik protein_coding protein_coding MGP_BALBcJ_T0013142.1 MGP_BALBcJ_G0011239.1 mouse_genomes_project 16 41621668 41621960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013155.1 MGP_BALBcJ_G0011252.1 mouse_genomes_project 16 47498440 47500090 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003632.1 MGP_BALBcJ_G0003289.1 mouse_genomes_project 16 8243027 8246716 - Gm4279 antisense antisense MGP_BALBcJ_T0044860.1 MGP_BALBcJ_G0022933.1 mouse_genomes_project 16 75649114 75676310 - MGP_BALBcJ_P0044860 D16Ertd472e protein_coding protein_coding MGP_BALBcJ_T0044861.1 MGP_BALBcJ_G0022933.1 mouse_genomes_project 16 75649791 75676310 - MGP_BALBcJ_P0044861 D16Ertd472e protein_coding protein_coding MGP_BALBcJ_T0044862.1 MGP_BALBcJ_G0022933.1 mouse_genomes_project 16 75650063 75676310 - MGP_BALBcJ_P0044862 D16Ertd472e protein_coding protein_coding MGP_BALBcJ_T0043317.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13633832 13651658 + MGP_BALBcJ_P0043317 Ypel1 protein_coding protein_coding MGP_BALBcJ_T0043318.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13634294 13651263 + Ypel1 protein_coding processed_transcript MGP_BALBcJ_T0043319.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13634334 13643056 + Ypel1 protein_coding retained_intron MGP_BALBcJ_T0043320.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13634335 13647016 + MGP_BALBcJ_P0043320 Ypel1 protein_coding protein_coding MGP_BALBcJ_T0043321.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13634362 13651967 + MGP_BALBcJ_P0043321 Ypel1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043322.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13634365 13647098 + MGP_BALBcJ_P0043322 Ypel1 protein_coding protein_coding MGP_BALBcJ_T0043323.1 MGP_BALBcJ_G0022531.1 mouse_genomes_project 16 13634440 13647616 + MGP_BALBcJ_P0043323 Ypel1 protein_coding protein_coding MGP_BALBcJ_T0043999.1 MGP_BALBcJ_G0022691.1 mouse_genomes_project 16 28728466 28729911 - MGP_BALBcJ_P0043999 0610012G03Rik protein_coding protein_coding MGP_BALBcJ_T0003660.1 MGP_BALBcJ_G0003311.1 mouse_genomes_project 16 35118293 35120698 + Maats1os antisense antisense MGP_BALBcJ_T0000957.1 MGP_BALBcJ_G0000887.1 mouse_genomes_project 16 74493074 74496180 + TEC TEC MGP_BALBcJ_T0000958.1 MGP_BALBcJ_G0000887.1 mouse_genomes_project 16 74493891 74494253 + TEC pseudogene MGP_BALBcJ_T0000960.1 MGP_BALBcJ_G0000889.1 mouse_genomes_project 16 74510200 74513573 + TEC TEC MGP_BALBcJ_T0044083.1 MGP_BALBcJ_G0022713.1 mouse_genomes_project 16 29584540 29590336 - MGP_BALBcJ_P0044083 Gm933 protein_coding protein_coding MGP_BALBcJ_T0044418.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40650633 40682150 - MGP_BALBcJ_P0044418 Qtrtd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0044419.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40650636 40682165 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0044420.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40650636 40682202 - MGP_BALBcJ_P0044420 Qtrtd1 protein_coding protein_coding MGP_BALBcJ_T0044421.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40652013 40660077 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0044422.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40652259 40716528 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0044423.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40660028 40661917 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0044424.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40661467 40682173 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0044425.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40664182 40669473 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0044426.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40669291 40682172 - MGP_BALBcJ_P0044426 Qtrtd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044427.1 MGP_BALBcJ_G0022796.1 mouse_genomes_project 16 40672811 40682173 - Qtrtd1 protein_coding retained_intron MGP_BALBcJ_T0045333.1 MGP_BALBcJ_G0023061.1 mouse_genomes_project 16 94788795 94794028 - Fam3b protein_coding processed_transcript MGP_BALBcJ_T0045334.1 MGP_BALBcJ_G0023061.1 mouse_genomes_project 16 94788829 94822880 - MGP_BALBcJ_P0045334 Fam3b protein_coding protein_coding MGP_BALBcJ_T0043264.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 12984352 13123875 - MGP_BALBcJ_P0043264 Fgd4 protein_coding protein_coding MGP_BALBcJ_T0043265.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 12989999 13165177 - MGP_BALBcJ_P0043265 Fgd4 protein_coding protein_coding MGP_BALBcJ_T0043266.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 12990038 13091029 - MGP_BALBcJ_P0043266 Fgd4 protein_coding protein_coding MGP_BALBcJ_T0043267.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13001682 13123702 - Fgd4 protein_coding retained_intron MGP_BALBcJ_T0043268.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13001682 13072621 - MGP_BALBcJ_P0043268 Fgd4 protein_coding protein_coding MGP_BALBcJ_T0043269.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13018316 13123867 - Fgd4 protein_coding retained_intron MGP_BALBcJ_T0043270.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13019421 13123867 - Fgd4 protein_coding retained_intron MGP_BALBcJ_T0043271.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13028291 13165748 - MGP_BALBcJ_P0043271 Fgd4 protein_coding protein_coding MGP_BALBcJ_T0043272.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13037609 13123646 - Fgd4 protein_coding retained_intron MGP_BALBcJ_T0043273.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13048742 13165238 - Fgd4 protein_coding retained_intron MGP_BALBcJ_T0043274.1 MGP_BALBcJ_G0022524.1 mouse_genomes_project 16 13049721 13091029 - Fgd4 protein_coding retained_intron MGP_BALBcJ_T0044961.1 MGP_BALBcJ_G0022978.1 mouse_genomes_project 16 86234116 86234648 - MGP_BALBcJ_P0044961 Gm10228 protein_coding protein_coding MGP_BALBcJ_T0043855.1 MGP_BALBcJ_G0022650.1 mouse_genomes_project 16 20204729 20209557 + MGP_BALBcJ_P0043855 Rtp1 protein_coding protein_coding MGP_BALBcJ_T0099548.1 MGP_BALBcJ_G0037584.1 mouse_genomes_project 16 85805411 85805495 - Gm23587 snRNA snRNA MGP_BALBcJ_T0006847.1 MGP_BALBcJ_G0005640.1 mouse_genomes_project 16 66853197 66857338 - Gm43265 lincRNA lincRNA MGP_BALBcJ_T0013164.1 MGP_BALBcJ_G0011261.1 mouse_genomes_project 16 72038898 72039906 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099526.1 MGP_BALBcJ_G0037562.1 mouse_genomes_project 16 33068558 33068663 - Gm24801 snRNA snRNA MGP_BALBcJ_T0043564.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098777 15167661 + MGP_BALBcJ_P0043564 Gnb1l protein_coding protein_coding MGP_BALBcJ_T0043565.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098832 15153370 + MGP_BALBcJ_P0043565 Gnb1l protein_coding protein_coding MGP_BALBcJ_T0043566.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098887 15153554 + Gnb1l protein_coding processed_transcript MGP_BALBcJ_T0043567.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098895 15153420 + MGP_BALBcJ_P0043567 Gnb1l protein_coding protein_coding MGP_BALBcJ_T0043568.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098895 15167609 + MGP_BALBcJ_P0043568 Gnb1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043569.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098897 15167661 + MGP_BALBcJ_P0043569 Gnb1l protein_coding protein_coding MGP_BALBcJ_T0043570.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098897 15167661 + MGP_BALBcJ_P0043570 Gnb1l protein_coding protein_coding MGP_BALBcJ_T0043571.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098900 15153493 + Gnb1l protein_coding processed_transcript MGP_BALBcJ_T0043572.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098906 15145207 + MGP_BALBcJ_P0043572 Gnb1l protein_coding protein_coding MGP_BALBcJ_T0043574.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15098911 15165520 + MGP_BALBcJ_P0043574 Gnb1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043575.1 MGP_BALBcJ_G0022578.1 mouse_genomes_project 16 15149724 15153566 + Gnb1l protein_coding processed_transcript MGP_BALBcJ_T0010144.1 MGP_BALBcJ_G0008269.1 mouse_genomes_project 16 89167037 89167115 - Gm27773 miRNA miRNA MGP_BALBcJ_T0044685.1 MGP_BALBcJ_G0022864.1 mouse_genomes_project 16 54101167 54127813 - MGP_BALBcJ_P0044685 Tmem30c protein_coding protein_coding MGP_BALBcJ_T0044686.1 MGP_BALBcJ_G0022864.1 mouse_genomes_project 16 54101443 54127799 - MGP_BALBcJ_P0044686 Tmem30c protein_coding protein_coding MGP_BALBcJ_T0044687.1 MGP_BALBcJ_G0022864.1 mouse_genomes_project 16 54104330 54127799 - MGP_BALBcJ_P0044687 Tmem30c protein_coding protein_coding MGP_BALBcJ_T0044899.1 MGP_BALBcJ_G0022945.1 mouse_genomes_project 16 84526056 84548200 + MGP_BALBcJ_P0044899 N6amt1 protein_coding protein_coding MGP_BALBcJ_T0044900.1 MGP_BALBcJ_G0022945.1 mouse_genomes_project 16 84526073 84546299 + MGP_BALBcJ_P0044900 N6amt1 protein_coding protein_coding MGP_BALBcJ_T0044901.1 MGP_BALBcJ_G0022945.1 mouse_genomes_project 16 84526075 84548314 + MGP_BALBcJ_P0044901 N6amt1 protein_coding protein_coding MGP_BALBcJ_T0044059.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29420114 29444729 + Tnk2 protein_coding processed_transcript MGP_BALBcJ_T0044060.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29420531 29440335 + Tnk2 protein_coding processed_transcript MGP_BALBcJ_T0044061.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29420883 29460260 + MGP_BALBcJ_P0044061 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044062.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29420883 29460260 + MGP_BALBcJ_P0044062 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044063.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29420913 29460260 + MGP_BALBcJ_P0044063 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044064.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29421066 29460259 + MGP_BALBcJ_P0044064 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044065.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29421199 29444742 + Tnk2 protein_coding processed_transcript MGP_BALBcJ_T0044066.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29433428 29444721 + Tnk2 protein_coding processed_transcript MGP_BALBcJ_T0044067.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29435388 29444713 + Tnk2 protein_coding processed_transcript MGP_BALBcJ_T0044068.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29444689 29448571 + Tnk2 protein_coding processed_transcript MGP_BALBcJ_T0044069.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29450090 29456235 + MGP_BALBcJ_P0044069 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044070.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29450092 29460260 + MGP_BALBcJ_P0044070 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044071.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29450114 29456449 + MGP_BALBcJ_P0044071 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044072.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29450128 29456902 + MGP_BALBcJ_P0044072 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044073.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29450131 29455833 + Tnk2 protein_coding retained_intron MGP_BALBcJ_T0044074.1 MGP_BALBcJ_G0022710.1 mouse_genomes_project 16 29450135 29456651 + MGP_BALBcJ_P0044074 Tnk2 protein_coding protein_coding MGP_BALBcJ_T0044951.1 MGP_BALBcJ_G0022968.1 mouse_genomes_project 16 86064285 86064890 - MGP_BALBcJ_P0044951 Krtap19-2 protein_coding protein_coding MGP_BALBcJ_T0013104.1 MGP_BALBcJ_G0011201.1 mouse_genomes_project 16 13646920 13647613 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099519.1 MGP_BALBcJ_G0037555.1 mouse_genomes_project 16 27598974 27599081 + Gm26295 snRNA snRNA MGP_BALBcJ_T0044093.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29660172 29674053 + Fyttd1 protein_coding processed_transcript MGP_BALBcJ_T0044094.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29660453 29691522 + MGP_BALBcJ_P0044094 Fyttd1 protein_coding protein_coding MGP_BALBcJ_T0044095.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29660456 29691610 + MGP_BALBcJ_P0044095 Fyttd1 protein_coding protein_coding MGP_BALBcJ_T0044096.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29660485 29679899 + Fyttd1 protein_coding processed_transcript MGP_BALBcJ_T0044097.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29660485 29677905 + Fyttd1 protein_coding retained_intron MGP_BALBcJ_T0044098.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29660523 29681501 + Fyttd1 protein_coding retained_intron MGP_BALBcJ_T0044099.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29665655 29688277 + MGP_BALBcJ_P0044099 Fyttd1 protein_coding protein_coding MGP_BALBcJ_T0044100.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29677739 29688426 + Fyttd1 protein_coding processed_transcript MGP_BALBcJ_T0044101.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29681399 29688349 + Fyttd1 protein_coding retained_intron MGP_BALBcJ_T0044102.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29682875 29688285 + Fyttd1 protein_coding retained_intron MGP_BALBcJ_T0044103.1 MGP_BALBcJ_G0022715.1 mouse_genomes_project 16 29684750 29688251 + Fyttd1 protein_coding retained_intron MGP_BALBcJ_T0100806.1 MGP_BALBcJ_G0038842.1 mouse_genomes_project 16 54718891 54719023 - Gm24039 snoRNA snoRNA MGP_BALBcJ_T0099516.1 MGP_BALBcJ_G0037552.1 mouse_genomes_project 16 20201248 20201319 + Gm23066 snRNA snRNA MGP_BALBcJ_T0044043.1 MGP_BALBcJ_G0022704.1 mouse_genomes_project 16 29179839 29187891 + MGP_BALBcJ_P0044043 Tm4sf19 protein_coding protein_coding MGP_BALBcJ_T0043099.1 MGP_BALBcJ_G0022483.1 mouse_genomes_project 16 7375564 7383684 + MGP_BALBcJ_P0043099 Rmi2 protein_coding protein_coding MGP_BALBcJ_T0043100.1 MGP_BALBcJ_G0022483.1 mouse_genomes_project 16 7375573 7434403 + MGP_BALBcJ_P0043100 Rmi2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099528.1 MGP_BALBcJ_G0037564.1 mouse_genomes_project 16 33158661 33158766 + Gm24569 snRNA snRNA MGP_BALBcJ_T0043391.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14080927 14100807 + MGP_BALBcJ_P0043391 Lztr1 protein_coding protein_coding MGP_BALBcJ_T0043392.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14081207 14100805 + MGP_BALBcJ_P0043392 Lztr1 protein_coding protein_coding MGP_BALBcJ_T0043393.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14081212 14099361 + Lztr1 protein_coding retained_intron MGP_BALBcJ_T0043394.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14081212 14084465 + Lztr1 protein_coding retained_intron MGP_BALBcJ_T0043395.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14081451 14088253 + Lztr1 protein_coding processed_transcript MGP_BALBcJ_T0043396.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14083301 14095557 + Lztr1 protein_coding processed_transcript MGP_BALBcJ_T0043397.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14088029 14094078 + Lztr1 protein_coding processed_transcript MGP_BALBcJ_T0043398.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14092631 14095076 + Lztr1 protein_coding retained_intron MGP_BALBcJ_T0043399.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14095465 14100805 + MGP_BALBcJ_P0043399 Lztr1 protein_coding protein_coding MGP_BALBcJ_T0043400.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14097190 14098765 + Lztr1 protein_coding retained_intron MGP_BALBcJ_T0043401.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14098607 14100245 + Lztr1 protein_coding retained_intron MGP_BALBcJ_T0043402.1 MGP_BALBcJ_G0022546.1 mouse_genomes_project 16 14099380 14100463 + Lztr1 protein_coding retained_intron MGP_BALBcJ_T0045293.1 MGP_BALBcJ_G0023050.1 mouse_genomes_project 16 93415830 93422324 - MGP_BALBcJ_P0045293 Hmgn1 protein_coding protein_coding MGP_BALBcJ_T0045294.1 MGP_BALBcJ_G0023050.1 mouse_genomes_project 16 93416900 93419934 - Hmgn1 protein_coding retained_intron MGP_BALBcJ_T0045295.1 MGP_BALBcJ_G0023050.1 mouse_genomes_project 16 93416970 93422199 - MGP_BALBcJ_P0045295 Hmgn1 protein_coding protein_coding MGP_BALBcJ_T0045296.1 MGP_BALBcJ_G0023050.1 mouse_genomes_project 16 93421199 93422061 - Hmgn1 protein_coding retained_intron MGP_BALBcJ_T0000956.1 MGP_BALBcJ_G0000886.1 mouse_genomes_project 16 74475019 74475671 + TEC TEC MGP_BALBcJ_T0044801.1 MGP_BALBcJ_G0022914.1 mouse_genomes_project 16 62477668 62491224 + MGP_BALBcJ_P0044801 Pou1f1 protein_coding protein_coding MGP_BALBcJ_T0044802.1 MGP_BALBcJ_G0022914.1 mouse_genomes_project 16 62477669 62482239 + Pou1f1 protein_coding retained_intron MGP_BALBcJ_T0044803.1 MGP_BALBcJ_G0022914.1 mouse_genomes_project 16 62477669 62492443 + MGP_BALBcJ_P0044803 Pou1f1 protein_coding protein_coding MGP_BALBcJ_T0044804.1 MGP_BALBcJ_G0022914.1 mouse_genomes_project 16 62477705 62491116 + MGP_BALBcJ_P0044804 Pou1f1 protein_coding protein_coding MGP_BALBcJ_T0044805.1 MGP_BALBcJ_G0022914.1 mouse_genomes_project 16 62479978 62490977 + MGP_BALBcJ_P0044805 Pou1f1 protein_coding protein_coding MGP_BALBcJ_T0099549.1 MGP_BALBcJ_G0037585.1 mouse_genomes_project 16 86644737 86644842 - Gm23655 snRNA snRNA MGP_BALBcJ_T0045330.1 MGP_BALBcJ_G0023059.1 mouse_genomes_project 16 94670342 94755262 + MGP_BALBcJ_P0045330 Bace2 protein_coding protein_coding MGP_BALBcJ_T0099547.1 MGP_BALBcJ_G0037583.1 mouse_genomes_project 16 81440314 81440421 + Gm24508 snRNA snRNA MGP_BALBcJ_T0044743.1 MGP_BALBcJ_G0022884.1 mouse_genomes_project 16 55898392 55902364 - MGP_BALBcJ_P0044743 Olfr187 protein_coding protein_coding MGP_BALBcJ_T0044744.1 MGP_BALBcJ_G0022884.1 mouse_genomes_project 16 55898392 55899370 - MGP_BALBcJ_P0044744 Olfr187 protein_coding protein_coding MGP_BALBcJ_T0044745.1 MGP_BALBcJ_G0022884.1 mouse_genomes_project 16 55898917 55902382 - MGP_BALBcJ_P0044745 Olfr187 protein_coding protein_coding MGP_BALBcJ_T0098337.1 MGP_BALBcJ_G0036391.1 mouse_genomes_project 16 86153373 86153609 - pseudogene pseudogene MGP_BALBcJ_T0044576.1 MGP_BALBcJ_G0022833.1 mouse_genomes_project 16 45558264 45596499 - MGP_BALBcJ_P0044576 Trat1 protein_coding protein_coding MGP_BALBcJ_T0044631.1 MGP_BALBcJ_G0022850.1 mouse_genomes_project 16 52792870 52798593 + MGP_BALBcJ_P0044631 Rpl24 protein_coding protein_coding MGP_BALBcJ_T0044632.1 MGP_BALBcJ_G0022850.1 mouse_genomes_project 16 52793016 52798593 + Rpl24 protein_coding processed_transcript MGP_BALBcJ_T0044633.1 MGP_BALBcJ_G0022850.1 mouse_genomes_project 16 52793142 52796906 + Rpl24 protein_coding retained_intron MGP_BALBcJ_T0044634.1 MGP_BALBcJ_G0022850.1 mouse_genomes_project 16 52797126 52798593 + Rpl24 protein_coding retained_intron MGP_BALBcJ_T0013120.1 MGP_BALBcJ_G0011217.1 mouse_genomes_project 16 19972693 19973720 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045061.1 MGP_BALBcJ_G0023012.1 mouse_genomes_project 16 88765981 88785231 + MGP_BALBcJ_P0045061 Ifngr2 protein_coding protein_coding MGP_BALBcJ_T0045062.1 MGP_BALBcJ_G0023012.1 mouse_genomes_project 16 88766056 88780666 + MGP_BALBcJ_P0045062 Ifngr2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045063.1 MGP_BALBcJ_G0023012.1 mouse_genomes_project 16 88781341 88785231 + Ifngr2 protein_coding processed_transcript MGP_BALBcJ_T0045277.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93272803 93374324 - MGP_BALBcJ_P0045277 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0045278.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93273160 93374343 - MGP_BALBcJ_P0045278 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0045279.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93279980 93374343 - MGP_BALBcJ_P0045279 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0045280.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93283145 93374343 - MGP_BALBcJ_P0045280 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0045281.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93284570 93338069 - MGP_BALBcJ_P0045281 Brwd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045282.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93285732 93292049 - Brwd1 protein_coding processed_transcript MGP_BALBcJ_T0045283.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93286125 93291956 - Brwd1 protein_coding retained_intron MGP_BALBcJ_T0045284.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93292320 93294782 - Brwd1 protein_coding retained_intron MGP_BALBcJ_T0045285.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93294614 93318318 - MGP_BALBcJ_P0045285 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0045286.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93300099 93301797 - Brwd1 protein_coding retained_intron MGP_BALBcJ_T0045287.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93303402 93303855 - Brwd1 protein_coding retained_intron MGP_BALBcJ_T0045288.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93323955 93326541 - Brwd1 protein_coding retained_intron MGP_BALBcJ_T0045289.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93326772 93352008 - MGP_BALBcJ_P0045289 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0045290.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93326896 93351973 - MGP_BALBcJ_P0045290 Brwd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045291.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93337130 93338352 - Brwd1 protein_coding retained_intron MGP_BALBcJ_T0045292.1 MGP_BALBcJ_G0023049.1 mouse_genomes_project 16 93357575 93374422 - MGP_BALBcJ_P0045292 Brwd1 protein_coding protein_coding MGP_BALBcJ_T0003653.1 MGP_BALBcJ_G0003306.1 mouse_genomes_project 16 30773111 30774185 + Gm15829 antisense antisense MGP_BALBcJ_T0043105.1 MGP_BALBcJ_G0022485.1 mouse_genomes_project 16 7612651 7621338 + MGP_BALBcJ_P0043105 Snn protein_coding protein_coding MGP_BALBcJ_T0044872.1 MGP_BALBcJ_G0022938.1 mouse_genomes_project 16 81918699 81974226 + MGP_BALBcJ_P0044872 Jam2 protein_coding protein_coding MGP_BALBcJ_T0044873.1 MGP_BALBcJ_G0022938.1 mouse_genomes_project 16 81918962 81959343 + MGP_BALBcJ_P0044873 Jam2 protein_coding protein_coding MGP_BALBcJ_T0044874.1 MGP_BALBcJ_G0022938.1 mouse_genomes_project 16 81957750 81971180 + Jam2 protein_coding processed_transcript MGP_BALBcJ_T0006831.1 MGP_BALBcJ_G0005630.1 mouse_genomes_project 16 41121900 41124978 + Gm26732 lincRNA lincRNA MGP_BALBcJ_T0102269.1 MGP_BALBcJ_G0040085.1 mouse_genomes_project 16 32954696 32956342 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0043038.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5215204 5321418 - MGP_BALBcJ_P0043038 Usp7 protein_coding protein_coding MGP_BALBcJ_T0043039.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5215209 5267369 - MGP_BALBcJ_P0043039 Usp7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043040.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5215755 5267292 - MGP_BALBcJ_P0043040 Usp7 protein_coding protein_coding MGP_BALBcJ_T0043041.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5216389 5247269 - Usp7 protein_coding processed_transcript MGP_BALBcJ_T0043042.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5221786 5224440 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043043.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5222286 5223191 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043044.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5223085 5224142 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043045.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5223260 5232342 - MGP_BALBcJ_P0043045 Usp7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043046.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5225766 5229394 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043047.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5229078 5232540 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043048.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5230557 5230922 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043049.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5230566 5231832 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0043050.1 MGP_BALBcJ_G0022465.1 mouse_genomes_project 16 5231572 5232441 - Usp7 protein_coding retained_intron MGP_BALBcJ_T0045297.1 MGP_BALBcJ_G0023051.1 mouse_genomes_project 16 93441903 93451273 + Wrb protein_coding retained_intron MGP_BALBcJ_T0045298.1 MGP_BALBcJ_G0023051.1 mouse_genomes_project 16 93441903 93443261 + Wrb protein_coding processed_transcript MGP_BALBcJ_T0045299.1 MGP_BALBcJ_G0023051.1 mouse_genomes_project 16 93441903 93454730 + MGP_BALBcJ_P0045299 Wrb protein_coding protein_coding MGP_BALBcJ_T0045300.1 MGP_BALBcJ_G0023051.1 mouse_genomes_project 16 93441907 93448338 + MGP_BALBcJ_P0045300 Wrb protein_coding protein_coding MGP_BALBcJ_T0044854.1 MGP_BALBcJ_G0022928.1 mouse_genomes_project 16 74683131 74696883 - MGP_BALBcJ_P0044854 Gm11146 protein_coding protein_coding MGP_BALBcJ_T0000017.1 MGP_BALBcJ_G0000012.1 mouse_genomes_project 16 15682199 15682651 - MGP_BALBcJ_P0000017 Iglc3 IG_C_gene IG_C_gene MGP_BALBcJ_T0044760.1 MGP_BALBcJ_G0022898.1 mouse_genomes_project 16 56276254 56277279 - MGP_BALBcJ_P0044760 Olfr209 protein_coding protein_coding MGP_BALBcJ_T0044797.1 MGP_BALBcJ_G0022911.1 mouse_genomes_project 16 61749897 61818002 - MGP_BALBcJ_P0044797 protein_coding protein_coding MGP_BALBcJ_T0099515.1 MGP_BALBcJ_G0037551.1 mouse_genomes_project 16 19798569 19798675 + Gm23715 snRNA snRNA MGP_BALBcJ_T0006853.1 MGP_BALBcJ_G0005644.1 mouse_genomes_project 16 84973193 84983093 + 2810407A14Rik lincRNA lincRNA MGP_BALBcJ_T0006854.1 MGP_BALBcJ_G0005644.1 mouse_genomes_project 16 84976681 85029580 + 2810407A14Rik lincRNA lincRNA MGP_BALBcJ_T0102015.1 MGP_BALBcJ_G0039849.1 mouse_genomes_project 16 17120088 17122959 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0044664.1 MGP_BALBcJ_G0022856.1 mouse_genomes_project 16 53303514 53525229 + MGP_BALBcJ_P0044664 Abi3bp protein_coding protein_coding MGP_BALBcJ_T0044665.1 MGP_BALBcJ_G0022856.1 mouse_genomes_project 16 53303514 53525229 + MGP_BALBcJ_P0044665 Abi3bp protein_coding protein_coding MGP_BALBcJ_T0044666.1 MGP_BALBcJ_G0022856.1 mouse_genomes_project 16 53303514 53525229 + MGP_BALBcJ_P0044666 Abi3bp protein_coding protein_coding MGP_BALBcJ_T0044667.1 MGP_BALBcJ_G0022856.1 mouse_genomes_project 16 53303514 53525229 + MGP_BALBcJ_P0044667 Abi3bp protein_coding protein_coding MGP_BALBcJ_T0044668.1 MGP_BALBcJ_G0022856.1 mouse_genomes_project 16 53303582 53525239 + MGP_BALBcJ_P0044668 Abi3bp protein_coding unknown_likely_coding MGP_BALBcJ_T0010129.1 MGP_BALBcJ_G0008254.1 mouse_genomes_project 16 52906626 52906730 + Gm24047 miRNA miRNA MGP_BALBcJ_T0044147.1 MGP_BALBcJ_G0022726.1 mouse_genomes_project 16 30635188 30755726 + MGP_BALBcJ_P0044147 Itgb5 protein_coding protein_coding MGP_BALBcJ_T0044148.1 MGP_BALBcJ_G0022726.1 mouse_genomes_project 16 30635200 30755733 + MGP_BALBcJ_P0044148 Itgb5 protein_coding protein_coding MGP_BALBcJ_T0044149.1 MGP_BALBcJ_G0022726.1 mouse_genomes_project 16 30686574 30712400 + Itgb5 protein_coding processed_transcript MGP_BALBcJ_T0044150.1 MGP_BALBcJ_G0022726.1 mouse_genomes_project 16 30693950 30701260 + Itgb5 protein_coding processed_transcript MGP_BALBcJ_T0044151.1 MGP_BALBcJ_G0022726.1 mouse_genomes_project 16 30725026 30750728 + Itgb5 protein_coding processed_transcript MGP_BALBcJ_T0013147.1 MGP_BALBcJ_G0011244.1 mouse_genomes_project 16 42358774 42360130 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010091.1 MGP_BALBcJ_G0008216.1 mouse_genomes_project 16 7813040 7813118 - Mir1945 miRNA miRNA MGP_BALBcJ_T0043610.1 MGP_BALBcJ_G0022590.1 mouse_genomes_project 16 15917300 15918395 - MGP_BALBcJ_P0043610 Olfr164 protein_coding protein_coding MGP_BALBcJ_T0000955.1 MGP_BALBcJ_G0000885.1 mouse_genomes_project 16 73193056 73194716 + TEC TEC MGP_BALBcJ_T0017491.1 MGP_BALBcJ_G0015270.1 mouse_genomes_project 16 90591474 90607359 - 1810053B23Rik processed_transcript lincRNA MGP_BALBcJ_T0017492.1 MGP_BALBcJ_G0015270.1 mouse_genomes_project 16 90591919 90601402 - 1810053B23Rik processed_transcript lincRNA MGP_BALBcJ_T0017493.1 MGP_BALBcJ_G0015270.1 mouse_genomes_project 16 90592474 90602274 - 1810053B23Rik processed_transcript lincRNA MGP_BALBcJ_T0017494.1 MGP_BALBcJ_G0015270.1 mouse_genomes_project 16 90592942 90602284 - 1810053B23Rik processed_transcript lincRNA MGP_BALBcJ_T0017495.1 MGP_BALBcJ_G0015270.1 mouse_genomes_project 16 90594257 90608190 - 1810053B23Rik processed_transcript retained_intron MGP_BALBcJ_T0017496.1 MGP_BALBcJ_G0015270.1 mouse_genomes_project 16 90594996 90608158 - 1810053B23Rik processed_transcript retained_intron MGP_BALBcJ_T0044858.1 MGP_BALBcJ_G0022931.1 mouse_genomes_project 16 75463398 75481607 - MGP_BALBcJ_P0044858 protein_coding protein_coding MGP_BALBcJ_T0045188.1 MGP_BALBcJ_G0023036.1 mouse_genomes_project 16 91190310 91200961 - MGP_BALBcJ_P0045188 Cldn14 protein_coding protein_coding MGP_BALBcJ_T0045189.1 MGP_BALBcJ_G0023036.1 mouse_genomes_project 16 91190310 91200711 - MGP_BALBcJ_P0045189 Cldn14 protein_coding protein_coding MGP_BALBcJ_T0045190.1 MGP_BALBcJ_G0023036.1 mouse_genomes_project 16 91190311 91279015 - MGP_BALBcJ_P0045190 Cldn14 protein_coding protein_coding MGP_BALBcJ_T0045191.1 MGP_BALBcJ_G0023036.1 mouse_genomes_project 16 91191028 91200711 - Cldn14 protein_coding processed_transcript MGP_BALBcJ_T0045192.1 MGP_BALBcJ_G0023036.1 mouse_genomes_project 16 91191086 91200961 - Cldn14 protein_coding processed_transcript MGP_BALBcJ_T0013169.1 MGP_BALBcJ_G0011266.1 mouse_genomes_project 16 77003815 77004245 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044039.1 MGP_BALBcJ_G0022702.1 mouse_genomes_project 16 29053293 29064794 + MGP_BALBcJ_P0044039 Rnf168 protein_coding protein_coding MGP_BALBcJ_T0044040.1 MGP_BALBcJ_G0022702.1 mouse_genomes_project 16 29053295 29073153 + MGP_BALBcJ_P0044040 Rnf168 protein_coding protein_coding MGP_BALBcJ_T0044041.1 MGP_BALBcJ_G0022702.1 mouse_genomes_project 16 29053295 29073681 + MGP_BALBcJ_P0044041 Rnf168 protein_coding protein_coding MGP_BALBcJ_T0043252.1 MGP_BALBcJ_G0022521.1 mouse_genomes_project 16 12785784 12799735 + MGP_BALBcJ_P0043252 Pkp2 protein_coding protein_coding MGP_BALBcJ_T0043253.1 MGP_BALBcJ_G0022521.1 mouse_genomes_project 16 12785784 12820833 + MGP_BALBcJ_P0043253 Pkp2 protein_coding protein_coding MGP_BALBcJ_T0043254.1 MGP_BALBcJ_G0022521.1 mouse_genomes_project 16 12785784 12845050 + MGP_BALBcJ_P0043254 Pkp2 protein_coding protein_coding MGP_BALBcJ_T0044290.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33791657 33874900 + MGP_BALBcJ_P0044290 Polq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044291.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33791657 33875305 + MGP_BALBcJ_P0044291 Polq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044292.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33791657 33874900 + MGP_BALBcJ_P0044292 Polq protein_coding protein_coding MGP_BALBcJ_T0044293.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33791657 33875325 + MGP_BALBcJ_P0044293 Polq protein_coding protein_coding MGP_BALBcJ_T0044294.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33791686 33797519 + Polq protein_coding retained_intron MGP_BALBcJ_T0044295.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33820205 33841703 + Polq protein_coding retained_intron MGP_BALBcJ_T0044296.1 MGP_BALBcJ_G0022764.1 mouse_genomes_project 16 33865840 33875325 + Polq protein_coding retained_intron MGP_BALBcJ_T0010108.1 MGP_BALBcJ_G0008233.1 mouse_genomes_project 16 17960255 17960309 - Mir7680 miRNA miRNA MGP_BALBcJ_T0044335.1 MGP_BALBcJ_G0022776.1 mouse_genomes_project 16 35113431 35157651 - MGP_BALBcJ_P0044335 Maats1 protein_coding protein_coding MGP_BALBcJ_T0044336.1 MGP_BALBcJ_G0022776.1 mouse_genomes_project 16 35137730 35157618 - MGP_BALBcJ_P0044336 Maats1 protein_coding protein_coding MGP_BALBcJ_T0044337.1 MGP_BALBcJ_G0022776.1 mouse_genomes_project 16 35147693 35157949 - Maats1 protein_coding processed_transcript MGP_BALBcJ_T0013083.1 MGP_BALBcJ_G0011180.1 mouse_genomes_project 16 376819 377385 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013131.1 MGP_BALBcJ_G0011228.1 mouse_genomes_project 16 33561120 33561894 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044925.1 MGP_BALBcJ_G0022950.1 mouse_genomes_project 16 84733275 84776740 + MGP_BALBcJ_P0044925 Map3k7cl protein_coding protein_coding MGP_BALBcJ_T0042917.1 MGP_BALBcJ_G0022432.1 mouse_genomes_project 16 1074899 1096115 + MGP_BALBcJ_P0042917 Glis2 protein_coding protein_coding MGP_BALBcJ_T0042918.1 MGP_BALBcJ_G0022432.1 mouse_genomes_project 16 1081348 1090571 + MGP_BALBcJ_P0042918 Glis2 protein_coding protein_coding MGP_BALBcJ_T0042919.1 MGP_BALBcJ_G0022432.1 mouse_genomes_project 16 1088834 1096100 + Glis2 protein_coding retained_intron MGP_BALBcJ_T0042920.1 MGP_BALBcJ_G0022432.1 mouse_genomes_project 16 1091567 1093814 + Glis2 protein_coding retained_intron MGP_BALBcJ_T0042921.1 MGP_BALBcJ_G0022432.1 mouse_genomes_project 16 1091785 1105160 + Glis2 protein_coding processed_transcript MGP_BALBcJ_T0006822.1 MGP_BALBcJ_G0005621.1 mouse_genomes_project 16 26779357 26791932 + 4632428C04Rik lincRNA lincRNA MGP_BALBcJ_T0010118.1 MGP_BALBcJ_G0008243.1 mouse_genomes_project 16 33571990 33572060 + Gm22617 miRNA miRNA MGP_BALBcJ_T0100809.1 MGP_BALBcJ_G0038845.1 mouse_genomes_project 16 62130013 62130143 - Gm22429 snoRNA snoRNA MGP_BALBcJ_T0044962.1 MGP_BALBcJ_G0022979.1 mouse_genomes_project 16 86239919 86240519 - MGP_BALBcJ_P0044962 Krtap6-5 protein_coding protein_coding MGP_BALBcJ_T0044937.1 MGP_BALBcJ_G0022956.1 mouse_genomes_project 16 85817552 85818433 - MGP_BALBcJ_P0044937 2310079G19Rik protein_coding protein_coding MGP_BALBcJ_T0006800.1 MGP_BALBcJ_G0005602.1 mouse_genomes_project 16 1420154 1424692 - Gm16861 lincRNA lincRNA MGP_BALBcJ_T0013127.1 MGP_BALBcJ_G0011224.1 mouse_genomes_project 16 28768036 28768319 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099540.1 MGP_BALBcJ_G0037576.1 mouse_genomes_project 16 52423995 52424102 - Gm23003 snRNA snRNA MGP_BALBcJ_T0099531.1 MGP_BALBcJ_G0037567.1 mouse_genomes_project 16 34786890 34787030 + Gm25140 snRNA snRNA MGP_BALBcJ_T0044561.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43207901 43317924 - MGP_BALBcJ_P0044561 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044562.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43215053 43231721 - MGP_BALBcJ_P0044562 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044563.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43215100 43231777 - MGP_BALBcJ_P0044563 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044564.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43215184 43269024 - MGP_BALBcJ_P0044564 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044565.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43215638 43258550 - MGP_BALBcJ_P0044565 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044566.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43256473 43317809 - MGP_BALBcJ_P0044566 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044567.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43256885 43259128 - Nectin3 protein_coding retained_intron MGP_BALBcJ_T0044568.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43267682 43317924 - MGP_BALBcJ_P0044568 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044569.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43275154 43317729 - MGP_BALBcJ_P0044569 Nectin3 protein_coding protein_coding MGP_BALBcJ_T0044570.1 MGP_BALBcJ_G0022828.1 mouse_genomes_project 16 43279344 43319482 - Nectin3 protein_coding processed_transcript MGP_BALBcJ_T0043906.1 MGP_BALBcJ_G0022671.1 mouse_genomes_project 16 26009586 26154329 - MGP_BALBcJ_P0043906 Atp13a5 protein_coding protein_coding MGP_BALBcJ_T0043907.1 MGP_BALBcJ_G0022671.1 mouse_genomes_project 16 26009649 26154303 - MGP_BALBcJ_P0043907 Atp13a5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043908.1 MGP_BALBcJ_G0022671.1 mouse_genomes_project 16 26010195 26154264 - MGP_BALBcJ_P0043908 Atp13a5 protein_coding protein_coding MGP_BALBcJ_T0043909.1 MGP_BALBcJ_G0022671.1 mouse_genomes_project 16 26109721 26154180 - MGP_BALBcJ_P0043909 Atp13a5 protein_coding protein_coding MGP_BALBcJ_T0000948.1 MGP_BALBcJ_G0000878.1 mouse_genomes_project 16 20771298 20773079 + TEC TEC MGP_BALBcJ_T0043921.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26346197 26420030 + MGP_BALBcJ_P0043921 Opa1 protein_coding protein_coding MGP_BALBcJ_T0043922.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26346241 26379989 + Opa1 protein_coding retained_intron MGP_BALBcJ_T0043923.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26346243 26417017 + MGP_BALBcJ_P0043923 Opa1 protein_coding protein_coding MGP_BALBcJ_T0043924.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26346243 26414168 + MGP_BALBcJ_P0043924 Opa1 protein_coding protein_coding MGP_BALBcJ_T0043925.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26346243 26395600 + MGP_BALBcJ_P0043925 Opa1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043926.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26346255 26417020 + Opa1 protein_coding retained_intron MGP_BALBcJ_T0043927.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26352316 26376272 + MGP_BALBcJ_P0043927 Opa1 protein_coding protein_coding MGP_BALBcJ_T0043928.1 MGP_BALBcJ_G0022673.1 mouse_genomes_project 16 26381989 26384075 + Opa1 protein_coding retained_intron MGP_BALBcJ_T0044179.1 MGP_BALBcJ_G0022732.1 mouse_genomes_project 16 31827714 31914556 + MGP_BALBcJ_P0044179 Hacd2 protein_coding protein_coding MGP_BALBcJ_T0044486.1 MGP_BALBcJ_G0022810.1 mouse_genomes_project 16 41628554 41656463 + MGP_BALBcJ_P0044486 Cd200r4 protein_coding protein_coding MGP_BALBcJ_T0044487.1 MGP_BALBcJ_G0022810.1 mouse_genomes_project 16 41628577 41656462 + MGP_BALBcJ_P0044487 Cd200r4 protein_coding protein_coding MGP_BALBcJ_T0044488.1 MGP_BALBcJ_G0022810.1 mouse_genomes_project 16 41637965 41656479 + MGP_BALBcJ_P0044488 Cd200r4 protein_coding protein_coding MGP_BALBcJ_T0100810.1 MGP_BALBcJ_G0038846.1 mouse_genomes_project 16 65483018 65483125 - Gm24681 snoRNA snoRNA MGP_BALBcJ_T0017457.1 MGP_BALBcJ_G0015256.1 mouse_genomes_project 16 29769623 29890338 - Gm17106 processed_transcript processed_transcript MGP_BALBcJ_T0044795.1 MGP_BALBcJ_G0022910.1 mouse_genomes_project 16 61718718 61736459 - 4930453N24Rik protein_coding processed_transcript MGP_BALBcJ_T0044796.1 MGP_BALBcJ_G0022910.1 mouse_genomes_project 16 61730815 61740940 - MGP_BALBcJ_P0044796 4930453N24Rik protein_coding protein_coding MGP_BALBcJ_T0044022.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28925508 28943157 - MGP_BALBcJ_P0044022 Nrros protein_coding protein_coding MGP_BALBcJ_T0044023.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28925518 28943129 - MGP_BALBcJ_P0044023 Nrros protein_coding protein_coding MGP_BALBcJ_T0044024.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28925518 28930605 - MGP_BALBcJ_P0044024 Nrros protein_coding protein_coding MGP_BALBcJ_T0044025.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28925548 28943048 - MGP_BALBcJ_P0044025 Nrros protein_coding protein_coding MGP_BALBcJ_T0044026.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28925548 28943066 - MGP_BALBcJ_P0044026 Nrros protein_coding protein_coding MGP_BALBcJ_T0044027.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28927405 28943166 - MGP_BALBcJ_P0044027 Nrros protein_coding protein_coding MGP_BALBcJ_T0044028.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28927538 28943048 - Nrros protein_coding processed_transcript MGP_BALBcJ_T0044029.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28927550 28930798 - Nrros protein_coding processed_transcript MGP_BALBcJ_T0044030.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28927597 28943054 - MGP_BALBcJ_P0044030 Nrros protein_coding protein_coding MGP_BALBcJ_T0044031.1 MGP_BALBcJ_G0022697.1 mouse_genomes_project 16 28930275 28943029 - Nrros protein_coding processed_transcript MGP_BALBcJ_T0044195.1 MGP_BALBcJ_G0022737.1 mouse_genomes_project 16 32503467 32578247 - MGP_BALBcJ_P0044195 Dirc2 protein_coding protein_coding MGP_BALBcJ_T0044196.1 MGP_BALBcJ_G0022737.1 mouse_genomes_project 16 32506953 32578221 - MGP_BALBcJ_P0044196 Dirc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010139.1 MGP_BALBcJ_G0008264.1 mouse_genomes_project 16 74741363 74741434 + Mir125b-2 miRNA miRNA MGP_BALBcJ_T0044134.1 MGP_BALBcJ_G0022723.1 mouse_genomes_project 16 30315587 30461481 + MGP_BALBcJ_P0044134 Slc12a8 protein_coding protein_coding MGP_BALBcJ_T0044135.1 MGP_BALBcJ_G0022723.1 mouse_genomes_project 16 30394845 30461800 + MGP_BALBcJ_P0044135 Slc12a8 protein_coding protein_coding MGP_BALBcJ_T0044136.1 MGP_BALBcJ_G0022723.1 mouse_genomes_project 16 30415035 30423331 + Slc12a8 protein_coding processed_transcript MGP_BALBcJ_T0013149.1 MGP_BALBcJ_G0011246.1 mouse_genomes_project 16 45036553 45037153 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044236.1 MGP_BALBcJ_G0022754.1 mouse_genomes_project 16 33233987 33238719 - MGP_BALBcJ_P0044236 Stfa3 protein_coding protein_coding MGP_BALBcJ_T0044537.1 MGP_BALBcJ_G0022822.1 mouse_genomes_project 16 42477979 42516980 - MGP_BALBcJ_P0044537 Tmprss7 protein_coding protein_coding MGP_BALBcJ_T0044538.1 MGP_BALBcJ_G0022822.1 mouse_genomes_project 16 42477981 42508652 - Tmprss7 protein_coding processed_transcript MGP_BALBcJ_T0044539.1 MGP_BALBcJ_G0022822.1 mouse_genomes_project 16 42478005 42512946 - Tmprss7 protein_coding processed_transcript MGP_BALBcJ_T0044540.1 MGP_BALBcJ_G0022822.1 mouse_genomes_project 16 42506667 42509770 - Tmprss7 protein_coding processed_transcript MGP_BALBcJ_T0044541.1 MGP_BALBcJ_G0022822.1 mouse_genomes_project 16 42506781 42509775 - Tmprss7 protein_coding retained_intron MGP_BALBcJ_T0043651.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 16953092 17056185 - MGP_BALBcJ_P0043651 Abcc5 protein_coding protein_coding MGP_BALBcJ_T0043652.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 16953095 17056126 - MGP_BALBcJ_P0043652 Abcc5 protein_coding protein_coding MGP_BALBcJ_T0043653.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 16953097 17022576 - Abcc5 protein_coding retained_intron MGP_BALBcJ_T0043654.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 16960735 16986072 - Abcc5 protein_coding processed_transcript MGP_BALBcJ_T0043655.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 16966445 16986266 - Abcc5 protein_coding retained_intron MGP_BALBcJ_T0043656.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 16990928 16999433 - Abcc5 protein_coding retained_intron MGP_BALBcJ_T0043657.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 17001274 17019358 - Abcc5 protein_coding retained_intron MGP_BALBcJ_T0043658.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 17015629 17055777 - MGP_BALBcJ_P0043658 Abcc5 protein_coding protein_coding MGP_BALBcJ_T0043659.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 17021771 17023241 - Abcc5 protein_coding retained_intron MGP_BALBcJ_T0043660.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 17023714 17056115 - Abcc5 protein_coding retained_intron MGP_BALBcJ_T0043661.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 17023715 17056145 - MGP_BALBcJ_P0043661 Abcc5 protein_coding protein_coding MGP_BALBcJ_T0043662.1 MGP_BALBcJ_G0022607.1 mouse_genomes_project 16 17023716 17027660 - Abcc5 protein_coding processed_transcript MGP_BALBcJ_T0043826.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882617 19884160 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043827.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882617 19887400 + MGP_BALBcJ_P0043827 Eif4a2 protein_coding protein_coding MGP_BALBcJ_T0043828.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882618 19883953 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043829.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882618 19884064 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043830.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882618 19886528 + MGP_BALBcJ_P0043830 Eif4a2 protein_coding unknown_likely_coding MGP_BALBcJ_T0043831.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882618 19888852 + MGP_BALBcJ_P0043831 Eif4a2 protein_coding protein_coding MGP_BALBcJ_T0043832.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882626 19886020 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043833.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882630 19885569 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043834.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882632 19885178 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043835.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882636 19884033 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043836.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882638 19885107 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043837.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19882776 19885510 + Eif4a2 protein_coding processed_transcript MGP_BALBcJ_T0043838.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19883441 19884330 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043839.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19884090 19885426 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043840.1 MGP_BALBcJ_G0022645.1 mouse_genomes_project 16 19884904 19885657 + Eif4a2 protein_coding retained_intron MGP_BALBcJ_T0043930.1 MGP_BALBcJ_G0022675.1 mouse_genomes_project 16 26835746 26836932 + Hes1 protein_coding processed_transcript MGP_BALBcJ_T0043931.1 MGP_BALBcJ_G0022675.1 mouse_genomes_project 16 26836702 26839159 + MGP_BALBcJ_P0043931 Hes1 protein_coding protein_coding MGP_BALBcJ_T0043932.1 MGP_BALBcJ_G0022675.1 mouse_genomes_project 16 26837459 26838486 + Hes1 protein_coding retained_intron MGP_BALBcJ_T0043933.1 MGP_BALBcJ_G0022675.1 mouse_genomes_project 16 26837700 26838682 + Hes1 protein_coding processed_transcript MGP_BALBcJ_T0099544.1 MGP_BALBcJ_G0037580.1 mouse_genomes_project 16 63193336 63193443 + Gm22448 snRNA snRNA MGP_BALBcJ_T0000959.1 MGP_BALBcJ_G0000888.1 mouse_genomes_project 16 74506547 74507821 + TEC TEC MGP_BALBcJ_T0044180.1 MGP_BALBcJ_G0022733.1 mouse_genomes_project 16 31960485 32114860 + MGP_BALBcJ_P0044180 Adcy5 protein_coding protein_coding MGP_BALBcJ_T0043711.1 MGP_BALBcJ_G0022616.1 mouse_genomes_project 16 17284161 17296740 + MGP_BALBcJ_P0043711 Psmd2 protein_coding protein_coding MGP_BALBcJ_T0043712.1 MGP_BALBcJ_G0022616.1 mouse_genomes_project 16 17284213 17296740 + MGP_BALBcJ_P0043712 Psmd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043713.1 MGP_BALBcJ_G0022616.1 mouse_genomes_project 16 17284225 17285264 + Psmd2 protein_coding processed_transcript MGP_BALBcJ_T0043714.1 MGP_BALBcJ_G0022616.1 mouse_genomes_project 16 17292314 17293024 + Psmd2 protein_coding processed_transcript MGP_BALBcJ_T0043715.1 MGP_BALBcJ_G0022616.1 mouse_genomes_project 16 17292659 17293676 + Psmd2 protein_coding processed_transcript MGP_BALBcJ_T0043716.1 MGP_BALBcJ_G0022616.1 mouse_genomes_project 16 17292726 17295417 + Psmd2 protein_coding processed_transcript MGP_BALBcJ_T0043214.1 MGP_BALBcJ_G0022507.1 mouse_genomes_project 16 10693989 10745054 - MGP_BALBcJ_P0043214 Marf1 protein_coding protein_coding MGP_BALBcJ_T0003646.1 MGP_BALBcJ_G0003301.1 mouse_genomes_project 16 28891233 28896094 + Gm15729 antisense antisense MGP_BALBcJ_T0003637.1 MGP_BALBcJ_G0003293.1 mouse_genomes_project 16 13657736 13661272 + Gm15585 antisense antisense MGP_BALBcJ_T0043704.1 MGP_BALBcJ_G0022615.1 mouse_genomes_project 16 17251389 17253462 - MGP_BALBcJ_P0043704 Camk2n2 protein_coding protein_coding MGP_BALBcJ_T0044728.1 MGP_BALBcJ_G0022878.1 mouse_genomes_project 16 55725347 55727105 - MGP_BALBcJ_P0044728 Olfr177 protein_coding protein_coding MGP_BALBcJ_T0044729.1 MGP_BALBcJ_G0022878.1 mouse_genomes_project 16 55725347 55726277 - MGP_BALBcJ_P0044729 Olfr177 protein_coding protein_coding MGP_BALBcJ_T0043336.1 MGP_BALBcJ_G0022533.1 mouse_genomes_project 16 13679546 13691253 - MGP_BALBcJ_P0043336 2610318N02Rik protein_coding protein_coding MGP_BALBcJ_T0100797.1 MGP_BALBcJ_G0038833.1 mouse_genomes_project 16 40622805 40622934 - Gm26074 snoRNA snoRNA MGP_BALBcJ_T0043457.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14346730 14358990 + MGP_BALBcJ_P0043457 Klhl22 protein_coding protein_coding MGP_BALBcJ_T0043458.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14346733 14380402 + MGP_BALBcJ_P0043458 Klhl22 protein_coding protein_coding MGP_BALBcJ_T0043459.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14346750 14359032 + MGP_BALBcJ_P0043459 Klhl22 protein_coding protein_coding MGP_BALBcJ_T0043460.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14346775 14366303 + Klhl22 protein_coding retained_intron MGP_BALBcJ_T0043461.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14346783 14380402 + MGP_BALBcJ_P0043461 Klhl22 protein_coding protein_coding MGP_BALBcJ_T0043462.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14347467 14358983 + MGP_BALBcJ_P0043462 Klhl22 protein_coding protein_coding MGP_BALBcJ_T0043463.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14349903 14380404 + MGP_BALBcJ_P0043463 Klhl22 protein_coding protein_coding MGP_BALBcJ_T0043464.1 MGP_BALBcJ_G0022554.1 mouse_genomes_project 16 14351210 14359007 + Klhl22 protein_coding retained_intron MGP_BALBcJ_T0044727.1 MGP_BALBcJ_G0022877.1 mouse_genomes_project 16 55630128 55632923 - MGP_BALBcJ_P0044727 Olfr175-ps1 protein_coding protein_coding MGP_BALBcJ_T0013082.1 MGP_BALBcJ_G0011179.1 mouse_genomes_project 16 375647 375960 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043602.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15491151 15547605 + MGP_BALBcJ_P0043602 Hira protein_coding protein_coding MGP_BALBcJ_T0043603.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15491180 15589391 + MGP_BALBcJ_P0043603 Hira protein_coding protein_coding MGP_BALBcJ_T0043604.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15491384 15525114 + Hira protein_coding retained_intron MGP_BALBcJ_T0043605.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15491384 15554551 + MGP_BALBcJ_P0043605 Hira protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043606.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15491526 15536161 + Hira protein_coding retained_intron MGP_BALBcJ_T0043607.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15542647 15545232 + Hira protein_coding processed_transcript MGP_BALBcJ_T0043608.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15545151 15554606 + Hira protein_coding retained_intron MGP_BALBcJ_T0043609.1 MGP_BALBcJ_G0022589.1 mouse_genomes_project 16 15552483 15566993 + Hira protein_coding processed_transcript MGP_BALBcJ_T0043633.1 MGP_BALBcJ_G0022603.1 mouse_genomes_project 16 16759985 16851458 + MGP_BALBcJ_P0043633 Yeats2 protein_coding protein_coding MGP_BALBcJ_T0043634.1 MGP_BALBcJ_G0022603.1 mouse_genomes_project 16 16759985 16851458 + MGP_BALBcJ_P0043634 Yeats2 protein_coding protein_coding MGP_BALBcJ_T0010092.1 MGP_BALBcJ_G0008217.1 mouse_genomes_project 16 10009460 10009539 + Mir193b miRNA miRNA MGP_BALBcJ_T0102266.1 MGP_BALBcJ_G0040082.1 mouse_genomes_project 16 10505295 10507878 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100777.1 MGP_BALBcJ_G0038813.1 mouse_genomes_project 16 10088515 10088639 - Gm25276 snoRNA snoRNA MGP_BALBcJ_T0043502.1 MGP_BALBcJ_G0022568.1 mouse_genomes_project 16 14718562 14743693 + MGP_BALBcJ_P0043502 Rtn4r protein_coding protein_coding MGP_BALBcJ_T0098335.1 MGP_BALBcJ_G0036389.1 mouse_genomes_project 16 56075881 56076811 - pseudogene pseudogene MGP_BALBcJ_T0044809.1 MGP_BALBcJ_G0022917.1 mouse_genomes_project 16 63595802 64591288 - MGP_BALBcJ_P0044809 protein_coding protein_coding MGP_BALBcJ_T0044810.1 MGP_BALBcJ_G0022917.1 mouse_genomes_project 16 63602128 64591203 - MGP_BALBcJ_P0044810 protein_coding protein_coding MGP_BALBcJ_T0044811.1 MGP_BALBcJ_G0022917.1 mouse_genomes_project 16 63602573 64591288 - MGP_BALBcJ_P0044811 protein_coding protein_coding MGP_BALBcJ_T0044812.1 MGP_BALBcJ_G0022917.1 mouse_genomes_project 16 63603476 63906394 - MGP_BALBcJ_P0044812 protein_coding protein_coding MGP_BALBcJ_T0044813.1 MGP_BALBcJ_G0022917.1 mouse_genomes_project 16 63729264 64590873 - MGP_BALBcJ_P0044813 protein_coding protein_coding MGP_BALBcJ_T0044814.1 MGP_BALBcJ_G0022917.1 mouse_genomes_project 16 63757133 63877387 - protein_coding processed_transcript MGP_BALBcJ_T0003665.1 MGP_BALBcJ_G0003316.1 mouse_genomes_project 16 42763088 42766045 + Gm15640 antisense antisense MGP_BALBcJ_T0044807.1 MGP_BALBcJ_G0022916.1 mouse_genomes_project 16 62763074 62810191 + MGP_BALBcJ_P0044807 Vgll3 protein_coding protein_coding MGP_BALBcJ_T0044808.1 MGP_BALBcJ_G0022916.1 mouse_genomes_project 16 62763074 62807849 + MGP_BALBcJ_P0044808 Vgll3 protein_coding unknown_likely_coding MGP_BALBcJ_T0100787.1 MGP_BALBcJ_G0038823.1 mouse_genomes_project 16 21682839 21682973 + Gm22672 snoRNA snoRNA MGP_BALBcJ_T0043806.1 MGP_BALBcJ_G0022637.1 mouse_genomes_project 16 19546683 19552894 - MGP_BALBcJ_P0043806 Crygs protein_coding protein_coding MGP_BALBcJ_T0098333.1 MGP_BALBcJ_G0036387.1 mouse_genomes_project 16 46731289 46733464 + pseudogene pseudogene MGP_BALBcJ_T0043582.1 MGP_BALBcJ_G0022584.1 mouse_genomes_project 16 15388343 15420241 - MGP_BALBcJ_P0043582 Cdc45 protein_coding protein_coding MGP_BALBcJ_T0043583.1 MGP_BALBcJ_G0022584.1 mouse_genomes_project 16 15388349 15419895 - MGP_BALBcJ_P0043583 Cdc45 protein_coding protein_coding MGP_BALBcJ_T0043584.1 MGP_BALBcJ_G0022584.1 mouse_genomes_project 16 15415624 15420256 - MGP_BALBcJ_P0043584 Cdc45 protein_coding protein_coding MGP_BALBcJ_T0044314.1 MGP_BALBcJ_G0022768.1 mouse_genomes_project 16 34372086 34424719 + MGP_BALBcJ_P0044314 Hgd protein_coding protein_coding MGP_BALBcJ_T0044315.1 MGP_BALBcJ_G0022768.1 mouse_genomes_project 16 34372183 34424719 + Hgd protein_coding processed_transcript MGP_BALBcJ_T0044316.1 MGP_BALBcJ_G0022768.1 mouse_genomes_project 16 34372187 34404767 + Hgd protein_coding retained_intron MGP_BALBcJ_T0044317.1 MGP_BALBcJ_G0022768.1 mouse_genomes_project 16 34372215 34408991 + Hgd protein_coding processed_transcript MGP_BALBcJ_T0044318.1 MGP_BALBcJ_G0022768.1 mouse_genomes_project 16 34414548 34424719 + Hgd protein_coding processed_transcript MGP_BALBcJ_T0043866.1 MGP_BALBcJ_G0022657.1 mouse_genomes_project 16 22080041 22224978 + MGP_BALBcJ_P0043866 Tprg protein_coding protein_coding MGP_BALBcJ_T0043867.1 MGP_BALBcJ_G0022657.1 mouse_genomes_project 16 22080045 22111513 + Tprg protein_coding retained_intron MGP_BALBcJ_T0100793.1 MGP_BALBcJ_G0038829.1 mouse_genomes_project 16 32530964 32531112 - Gm25967 snoRNA snoRNA MGP_BALBcJ_T0045071.1 MGP_BALBcJ_G0023015.1 mouse_genomes_project 16 88841183 88867490 - MGP_BALBcJ_P0045071 protein_coding unknown_likely_coding MGP_BALBcJ_T0045072.1 MGP_BALBcJ_G0023015.1 mouse_genomes_project 16 88841183 88863266 - MGP_BALBcJ_P0045072 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045073.1 MGP_BALBcJ_G0023015.1 mouse_genomes_project 16 88853524 88867395 - MGP_BALBcJ_P0045073 protein_coding protein_coding MGP_BALBcJ_T0000950.1 MGP_BALBcJ_G0000880.1 mouse_genomes_project 16 37111502 37111941 + TEC TEC MGP_BALBcJ_T0044676.1 MGP_BALBcJ_G0022858.1 mouse_genomes_project 16 53559891 53630194 - MGP_BALBcJ_P0044676 Adgrg7 protein_coding protein_coding MGP_BALBcJ_T0042937.1 MGP_BALBcJ_G0022436.1 mouse_genomes_project 16 1120257 1169015 + Dnaja3 protein_coding processed_transcript MGP_BALBcJ_T0042941.1 MGP_BALBcJ_G0022436.1 mouse_genomes_project 16 1165810 1190884 + MGP_BALBcJ_P0042941 Dnaja3 protein_coding protein_coding MGP_BALBcJ_T0042942.1 MGP_BALBcJ_G0022436.1 mouse_genomes_project 16 1165836 1190884 + MGP_BALBcJ_P0042942 Dnaja3 protein_coding protein_coding MGP_BALBcJ_T0042943.1 MGP_BALBcJ_G0022436.1 mouse_genomes_project 16 1165854 1177385 + Dnaja3 protein_coding retained_intron MGP_BALBcJ_T0099550.1 MGP_BALBcJ_G0037586.1 mouse_genomes_project 16 88553809 88553892 - Gm24695 snRNA snRNA MGP_BALBcJ_T0044531.1 MGP_BALBcJ_G0022819.1 mouse_genomes_project 16 42360949 42426997 + MGP_BALBcJ_P0044531 Slc9c1 protein_coding protein_coding MGP_BALBcJ_T0044532.1 MGP_BALBcJ_G0022819.1 mouse_genomes_project 16 42365215 42426882 + MGP_BALBcJ_P0044532 Slc9c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044533.1 MGP_BALBcJ_G0022819.1 mouse_genomes_project 16 42365215 42426882 + MGP_BALBcJ_P0044533 Slc9c1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044042.1 MGP_BALBcJ_G0022703.1 mouse_genomes_project 16 29107258 29171401 + MGP_BALBcJ_P0044042 Ubxn7 protein_coding protein_coding MGP_BALBcJ_T0042885.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490259 492574 + MGP_BALBcJ_P0042885 Dnase1 protein_coding protein_coding MGP_BALBcJ_T0042886.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490287 493342 + MGP_BALBcJ_P0042886 Dnase1 protein_coding protein_coding MGP_BALBcJ_T0042887.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490290 491339 + MGP_BALBcJ_P0042887 Dnase1 protein_coding protein_coding MGP_BALBcJ_T0042888.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490348 493342 + MGP_BALBcJ_P0042888 Dnase1 protein_coding protein_coding MGP_BALBcJ_T0042889.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490415 493341 + Dnase1 protein_coding retained_intron MGP_BALBcJ_T0042890.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490418 493342 + Dnase1 protein_coding retained_intron MGP_BALBcJ_T0042891.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490472 493193 + MGP_BALBcJ_P0042891 Dnase1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042892.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490593 491578 + Dnase1 protein_coding retained_intron MGP_BALBcJ_T0042893.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 490621 492657 + Dnase1 protein_coding retained_intron MGP_BALBcJ_T0042894.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 491539 492189 + Dnase1 protein_coding retained_intron MGP_BALBcJ_T0042895.1 MGP_BALBcJ_G0022426.1 mouse_genomes_project 16 492447 493342 + MGP_BALBcJ_P0042895 Dnase1 protein_coding protein_coding MGP_BALBcJ_T0045140.1 MGP_BALBcJ_G0023021.1 mouse_genomes_project 16 89291262 89345154 + MGP_BALBcJ_P0045140 Mrps6 protein_coding protein_coding MGP_BALBcJ_T0045143.1 MGP_BALBcJ_G0023021.1 mouse_genomes_project 16 89339112 89345154 + Mrps6 protein_coding processed_transcript MGP_BALBcJ_T0011391.1 MGP_BALBcJ_G0009516.1 mouse_genomes_project 16 44576814 44577046 + Gm25339 misc_RNA misc_RNA MGP_BALBcJ_T0045056.1 MGP_BALBcJ_G0023011.1 mouse_genomes_project 16 88702611 88725846 + MGP_BALBcJ_P0045056 Ifnar1 protein_coding protein_coding MGP_BALBcJ_T0045057.1 MGP_BALBcJ_G0023011.1 mouse_genomes_project 16 88702622 88725842 + MGP_BALBcJ_P0045057 Ifnar1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045058.1 MGP_BALBcJ_G0023011.1 mouse_genomes_project 16 88702637 88725846 + MGP_BALBcJ_P0045058 Ifnar1 protein_coding protein_coding MGP_BALBcJ_T0045059.1 MGP_BALBcJ_G0023011.1 mouse_genomes_project 16 88702650 88710191 + Ifnar1 protein_coding retained_intron MGP_BALBcJ_T0045060.1 MGP_BALBcJ_G0023011.1 mouse_genomes_project 16 88702709 88715032 + MGP_BALBcJ_P0045060 Ifnar1 protein_coding protein_coding MGP_BALBcJ_T0045039.1 MGP_BALBcJ_G0023004.1 mouse_genomes_project 16 88264277 88279488 - MGP_BALBcJ_P0045039 4932438H23Rik protein_coding protein_coding MGP_BALBcJ_T0045040.1 MGP_BALBcJ_G0023004.1 mouse_genomes_project 16 88264277 88279488 - MGP_BALBcJ_P0045040 4932438H23Rik protein_coding protein_coding MGP_BALBcJ_T0045041.1 MGP_BALBcJ_G0023004.1 mouse_genomes_project 16 88266180 88304548 - MGP_BALBcJ_P0045041 4932438H23Rik protein_coding protein_coding MGP_BALBcJ_T0006829.1 MGP_BALBcJ_G0005628.1 mouse_genomes_project 16 40128364 40146135 - Gm9968 lincRNA lincRNA MGP_BALBcJ_T0044626.1 MGP_BALBcJ_G0022848.1 mouse_genomes_project 16 52675302 52726864 - MGP_BALBcJ_P0044626 Nxpe3 protein_coding unknown_likely_coding MGP_BALBcJ_T0045194.1 MGP_BALBcJ_G0023038.1 mouse_genomes_project 16 91405663 91559636 - MGP_BALBcJ_P0045194 Hlcs protein_coding protein_coding MGP_BALBcJ_T0100791.1 MGP_BALBcJ_G0038827.1 mouse_genomes_project 16 29017829 29017973 - Gm25848 snoRNA snoRNA MGP_BALBcJ_T0042996.1 MGP_BALBcJ_G0022452.1 mouse_genomes_project 16 1639169 1678891 + MGP_BALBcJ_P0042996 Sec14l5 protein_coding unknown_likely_coding MGP_BALBcJ_T0010110.1 MGP_BALBcJ_G0008235.1 mouse_genomes_project 16 19340439 19340546 + Mir6362 miRNA miRNA MGP_BALBcJ_T0044718.1 MGP_BALBcJ_G0022874.1 mouse_genomes_project 16 55527664 55534007 + MGP_BALBcJ_P0044718 Cldnd1 protein_coding protein_coding MGP_BALBcJ_T0044719.1 MGP_BALBcJ_G0022874.1 mouse_genomes_project 16 55527679 55533364 + MGP_BALBcJ_P0044719 Cldnd1 protein_coding protein_coding MGP_BALBcJ_T0044720.1 MGP_BALBcJ_G0022874.1 mouse_genomes_project 16 55527777 55532745 + MGP_BALBcJ_P0044720 Cldnd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044721.1 MGP_BALBcJ_G0022874.1 mouse_genomes_project 16 55527793 55532664 + Cldnd1 protein_coding processed_transcript MGP_BALBcJ_T0044722.1 MGP_BALBcJ_G0022874.1 mouse_genomes_project 16 55527802 55531135 + MGP_BALBcJ_P0044722 Cldnd1 protein_coding protein_coding MGP_BALBcJ_T0044723.1 MGP_BALBcJ_G0022874.1 mouse_genomes_project 16 55532019 55532736 + Cldnd1 protein_coding retained_intron MGP_BALBcJ_T0043620.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16384841 16396846 + MGP_BALBcJ_P0043620 B3gnt5 protein_coding protein_coding MGP_BALBcJ_T0043621.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16384867 16397366 + MGP_BALBcJ_P0043621 B3gnt5 protein_coding protein_coding MGP_BALBcJ_T0043622.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16384867 16397076 + MGP_BALBcJ_P0043622 B3gnt5 protein_coding protein_coding MGP_BALBcJ_T0043623.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16385032 16390235 + B3gnt5 protein_coding processed_transcript MGP_BALBcJ_T0043624.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16385219 16393451 + B3gnt5 protein_coding retained_intron MGP_BALBcJ_T0043625.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16385220 16388973 + B3gnt5 protein_coding retained_intron MGP_BALBcJ_T0043626.1 MGP_BALBcJ_G0022599.1 mouse_genomes_project 16 16385687 16395237 + MGP_BALBcJ_P0043626 B3gnt5 protein_coding protein_coding MGP_BALBcJ_T0006840.1 MGP_BALBcJ_G0005635.1 mouse_genomes_project 16 47618441 47619124 + 1700116B05Rik lincRNA lincRNA MGP_BALBcJ_T0006841.1 MGP_BALBcJ_G0005635.1 mouse_genomes_project 16 47618510 47619098 + 1700116B05Rik lincRNA lincRNA MGP_BALBcJ_T0006825.1 MGP_BALBcJ_G0005624.1 mouse_genomes_project 16 30176104 30176977 - 1700007L15Rik lincRNA lincRNA MGP_BALBcJ_T0044536.1 MGP_BALBcJ_G0022821.1 mouse_genomes_project 16 42447168 42475781 - MGP_BALBcJ_P0044536 BC016579 protein_coding protein_coding MGP_BALBcJ_T0099529.1 MGP_BALBcJ_G0037565.1 mouse_genomes_project 16 33203999 33204103 + Gm22263 snRNA snRNA MGP_BALBcJ_T0006809.1 MGP_BALBcJ_G0005610.1 mouse_genomes_project 16 13608641 13610233 + 1700056N10Rik lincRNA lincRNA MGP_BALBcJ_T0045044.1 MGP_BALBcJ_G0023007.1 mouse_genomes_project 16 88473220 88475382 + MGP_BALBcJ_P0045044 Olig1 protein_coding protein_coding MGP_BALBcJ_T0044870.1 MGP_BALBcJ_G0022937.1 mouse_genomes_project 16 81863946 81882956 - MGP_BALBcJ_P0044870 Mrpl39 protein_coding protein_coding MGP_BALBcJ_T0044871.1 MGP_BALBcJ_G0022937.1 mouse_genomes_project 16 81881373 81882447 - Mrpl39 protein_coding processed_transcript MGP_BALBcJ_T0045348.1 MGP_BALBcJ_G0023065.1 mouse_genomes_project 16 95170918 95237328 - MGP_BALBcJ_P0045348 C2cd2 protein_coding protein_coding MGP_BALBcJ_T0003678.1 MGP_BALBcJ_G0003324.1 mouse_genomes_project 16 89541526 89545279 - 1700048M11Rik antisense antisense MGP_BALBcJ_T0044075.1 MGP_BALBcJ_G0022711.1 mouse_genomes_project 16 29514906 29561871 + protein_coding processed_transcript MGP_BALBcJ_T0044076.1 MGP_BALBcJ_G0022711.1 mouse_genomes_project 16 29535972 29562030 + MGP_BALBcJ_P0044076 protein_coding protein_coding MGP_BALBcJ_T0044077.1 MGP_BALBcJ_G0022711.1 mouse_genomes_project 16 29555982 29562023 + protein_coding processed_transcript MGP_BALBcJ_T0044078.1 MGP_BALBcJ_G0022711.1 mouse_genomes_project 16 29556061 29556650 + protein_coding processed_transcript MGP_BALBcJ_T0044080.1 MGP_BALBcJ_G0022711.1 mouse_genomes_project 16 29557226 29558622 + protein_coding retained_intron MGP_BALBcJ_T0044081.1 MGP_BALBcJ_G0022711.1 mouse_genomes_project 16 29558312 29558825 + protein_coding retained_intron MGP_BALBcJ_T0099552.1 MGP_BALBcJ_G0037588.1 mouse_genomes_project 16 91703907 91704067 + Gm23692 snRNA snRNA MGP_BALBcJ_T0003669.1 MGP_BALBcJ_G0003318.1 mouse_genomes_project 16 46575375 46615651 - Gm15518 antisense antisense MGP_BALBcJ_T0044575.1 MGP_BALBcJ_G0022832.1 mouse_genomes_project 16 45269126 45458680 + MGP_BALBcJ_P0044575 Morc1 protein_coding protein_coding MGP_BALBcJ_T0003635.1 MGP_BALBcJ_G0003291.1 mouse_genomes_project 16 10296821 10304764 + Pla2g10os antisense antisense MGP_BALBcJ_T0043619.1 MGP_BALBcJ_G0022598.1 mouse_genomes_project 16 16289149 16340303 - MGP_BALBcJ_P0043619 Lamp3 protein_coding protein_coding MGP_BALBcJ_T0045259.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92639017 92809008 - MGP_BALBcJ_P0045259 Erg protein_coding protein_coding MGP_BALBcJ_T0045260.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92639021 92740173 - MGP_BALBcJ_P0045260 Erg protein_coding protein_coding MGP_BALBcJ_T0045261.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640058 92809008 - MGP_BALBcJ_P0045261 Erg protein_coding protein_coding MGP_BALBcJ_T0045262.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640058 92866007 - MGP_BALBcJ_P0045262 Erg protein_coding protein_coding MGP_BALBcJ_T0045263.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640190 92740218 - MGP_BALBcJ_P0045263 Erg protein_coding protein_coding MGP_BALBcJ_T0045264.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640493 92802821 - MGP_BALBcJ_P0045264 Erg protein_coding protein_coding MGP_BALBcJ_T0045265.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640654 92740115 - MGP_BALBcJ_P0045265 Erg protein_coding protein_coding MGP_BALBcJ_T0045266.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640654 92808966 - MGP_BALBcJ_P0045266 Erg protein_coding protein_coding MGP_BALBcJ_T0045267.1 MGP_BALBcJ_G0023046.1 mouse_genomes_project 16 92640654 92740115 - MGP_BALBcJ_P0045267 Erg protein_coding protein_coding MGP_BALBcJ_T0044350.1 MGP_BALBcJ_G0022780.1 mouse_genomes_project 16 35210995 35247894 - MGP_BALBcJ_P0044350 Pla1a protein_coding protein_coding MGP_BALBcJ_T0044399.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 39639571 40244641 + Zbtb20 protein_coding retained_intron MGP_BALBcJ_T0044400.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 39679601 39849543 + Zbtb20 protein_coding processed_transcript MGP_BALBcJ_T0044401.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 39679751 40358351 + Zbtb20 protein_coding processed_transcript MGP_BALBcJ_T0044402.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 39679854 40366425 + MGP_BALBcJ_P0044402 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044403.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 39679861 40244540 + Zbtb20 protein_coding retained_intron MGP_BALBcJ_T0044404.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40016675 40398744 + MGP_BALBcJ_P0044404 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044405.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40016834 40084343 + Zbtb20 protein_coding retained_intron MGP_BALBcJ_T0044406.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40145527 40358331 + Zbtb20 protein_coding processed_transcript MGP_BALBcJ_T0044407.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40145932 40367451 + Zbtb20 protein_coding retained_intron MGP_BALBcJ_T0044408.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40146340 40398691 + MGP_BALBcJ_P0044408 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044409.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40146671 40398698 + MGP_BALBcJ_P0044409 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044410.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40290016 40365893 + MGP_BALBcJ_P0044410 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044411.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40290024 40360345 + MGP_BALBcJ_P0044411 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044412.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40290044 40398933 + MGP_BALBcJ_P0044412 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044413.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40290099 40365874 + Zbtb20 protein_coding processed_transcript MGP_BALBcJ_T0044414.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40294477 40358351 + Zbtb20 protein_coding processed_transcript MGP_BALBcJ_T0044415.1 MGP_BALBcJ_G0022793.1 mouse_genomes_project 16 40356774 40407918 + MGP_BALBcJ_P0044415 Zbtb20 protein_coding protein_coding MGP_BALBcJ_T0044326.1 MGP_BALBcJ_G0022771.1 mouse_genomes_project 16 34656642 34662159 - Gm36028 protein_coding retained_intron MGP_BALBcJ_T0044327.1 MGP_BALBcJ_G0022771.1 mouse_genomes_project 16 34656642 34666845 - MGP_BALBcJ_P0044327 Gm36028 protein_coding protein_coding MGP_BALBcJ_T0042968.1 MGP_BALBcJ_G0022442.1 mouse_genomes_project 16 1371899 1423403 + MGP_BALBcJ_P0042968 Mgrn1 protein_coding protein_coding MGP_BALBcJ_T0042969.1 MGP_BALBcJ_G0022442.1 mouse_genomes_project 16 1371899 1423403 + MGP_BALBcJ_P0042969 Mgrn1 protein_coding protein_coding MGP_BALBcJ_T0044635.1 MGP_BALBcJ_G0022851.1 mouse_genomes_project 16 52801042 52843229 + MGP_BALBcJ_P0044635 Zbtb11 protein_coding protein_coding MGP_BALBcJ_T0044636.1 MGP_BALBcJ_G0022851.1 mouse_genomes_project 16 52823399 52826562 + Zbtb11 protein_coding retained_intron MGP_BALBcJ_T0044637.1 MGP_BALBcJ_G0022851.1 mouse_genomes_project 16 52839507 52843229 + Zbtb11 protein_coding retained_intron MGP_BALBcJ_T0100801.1 MGP_BALBcJ_G0038837.1 mouse_genomes_project 16 49763583 49763709 - Gm25723 snoRNA snoRNA MGP_BALBcJ_T0043410.1 MGP_BALBcJ_G0022548.1 mouse_genomes_project 16 14126521 14143298 - MGP_BALBcJ_P0043410 Lrrc74b protein_coding protein_coding MGP_BALBcJ_T0043411.1 MGP_BALBcJ_G0022548.1 mouse_genomes_project 16 14126521 14143298 - MGP_BALBcJ_P0043411 Lrrc74b protein_coding protein_coding MGP_BALBcJ_T0043412.1 MGP_BALBcJ_G0022548.1 mouse_genomes_project 16 14127486 14136489 - Lrrc74b protein_coding processed_transcript MGP_BALBcJ_T0043413.1 MGP_BALBcJ_G0022548.1 mouse_genomes_project 16 14130867 14143295 - MGP_BALBcJ_P0043413 Lrrc74b protein_coding protein_coding MGP_BALBcJ_T0044328.1 MGP_BALBcJ_G0022772.1 mouse_genomes_project 16 34673974 34694748 + MGP_BALBcJ_P0044328 Lrrc58 protein_coding protein_coding MGP_BALBcJ_T0044009.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28865898 28882075 - MGP_BALBcJ_P0044009 Pigx protein_coding protein_coding MGP_BALBcJ_T0044010.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28865900 28869626 - Pigx protein_coding processed_transcript MGP_BALBcJ_T0044011.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28865904 28882052 - Pigx protein_coding processed_transcript MGP_BALBcJ_T0044012.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28865904 28882086 - MGP_BALBcJ_P0044012 Pigx protein_coding protein_coding MGP_BALBcJ_T0044013.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28865918 28882076 - MGP_BALBcJ_P0044013 Pigx protein_coding protein_coding MGP_BALBcJ_T0044014.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28865939 28882055 - MGP_BALBcJ_P0044014 Pigx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044015.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28866768 28882041 - MGP_BALBcJ_P0044015 Pigx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044016.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28868766 28882044 - MGP_BALBcJ_P0044016 Pigx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044017.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28868972 28882048 - MGP_BALBcJ_P0044017 Pigx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044018.1 MGP_BALBcJ_G0022695.1 mouse_genomes_project 16 28879412 28882059 - MGP_BALBcJ_P0044018 Pigx protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013110.1 MGP_BALBcJ_G0011207.1 mouse_genomes_project 16 15770454 15783920 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044823.1 MGP_BALBcJ_G0022920.1 mouse_genomes_project 16 69698816 70091442 + MGP_BALBcJ_P0044823 Robo1 protein_coding protein_coding MGP_BALBcJ_T0003640.1 MGP_BALBcJ_G0003296.1 mouse_genomes_project 16 15194151 15212333 + 4930588K23Rik antisense antisense MGP_BALBcJ_T0042835.1 MGP_BALBcJ_G0022413.1 mouse_genomes_project 16 42433 43446 + MGP_BALBcJ_P0042835 Olfr161 protein_coding protein_coding MGP_BALBcJ_T0045171.1 MGP_BALBcJ_G0023033.1 mouse_genomes_project 16 90977076 91077947 + MGP_BALBcJ_P0045171 Dopey2 protein_coding protein_coding MGP_BALBcJ_T0045172.1 MGP_BALBcJ_G0023033.1 mouse_genomes_project 16 90977210 91077950 + MGP_BALBcJ_P0045172 Dopey2 protein_coding unknown_likely_coding MGP_BALBcJ_T0006799.1 MGP_BALBcJ_G0005601.1 mouse_genomes_project 16 311227 333654 + Gm26675 lincRNA lincRNA MGP_BALBcJ_T0010125.1 MGP_BALBcJ_G0008250.1 mouse_genomes_project 16 41364654 41364738 - Mir3081 miRNA miRNA MGP_BALBcJ_T0044755.1 MGP_BALBcJ_G0022893.1 mouse_genomes_project 16 56121244 56122175 - MGP_BALBcJ_P0044755 protein_coding protein_coding MGP_BALBcJ_T0043980.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28445399 28653801 + MGP_BALBcJ_P0043980 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043981.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28445865 28652297 + MGP_BALBcJ_P0043981 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043982.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28445891 28653807 + MGP_BALBcJ_P0043982 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043983.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28445911 28653800 + MGP_BALBcJ_P0043983 Dlg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043984.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28445995 28653797 + MGP_BALBcJ_P0043984 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043985.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28446106 28653135 + MGP_BALBcJ_P0043985 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043986.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28466601 28556784 + Dlg1 protein_coding retained_intron MGP_BALBcJ_T0043987.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28537062 28652712 + MGP_BALBcJ_P0043987 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043988.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28574973 28623138 + MGP_BALBcJ_P0043988 Dlg1 protein_coding protein_coding MGP_BALBcJ_T0043989.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28609637 28616811 + Dlg1 protein_coding retained_intron MGP_BALBcJ_T0043990.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28616589 28638251 + MGP_BALBcJ_P0043990 Dlg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043991.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28627641 28638206 + Dlg1 protein_coding retained_intron MGP_BALBcJ_T0043992.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28633932 28643666 + Dlg1 protein_coding retained_intron MGP_BALBcJ_T0043993.1 MGP_BALBcJ_G0022688.1 mouse_genomes_project 16 28647941 28652299 + Dlg1 protein_coding retained_intron MGP_BALBcJ_T0044954.1 MGP_BALBcJ_G0022971.1 mouse_genomes_project 16 86087236 86087719 - MGP_BALBcJ_P0044954 Krtap19-5 protein_coding protein_coding MGP_BALBcJ_T0044084.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29601490 29650396 - MGP_BALBcJ_P0044084 Rubcn protein_coding protein_coding MGP_BALBcJ_T0044085.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29601494 29604733 - Rubcn protein_coding retained_intron MGP_BALBcJ_T0044086.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29601494 29650369 - MGP_BALBcJ_P0044086 Rubcn protein_coding protein_coding MGP_BALBcJ_T0044087.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29601507 29650169 - MGP_BALBcJ_P0044087 Rubcn protein_coding protein_coding MGP_BALBcJ_T0044088.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29601515 29650381 - MGP_BALBcJ_P0044088 Rubcn protein_coding protein_coding MGP_BALBcJ_T0044089.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29603262 29618355 - Rubcn protein_coding retained_intron MGP_BALBcJ_T0044090.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29607728 29609491 - Rubcn protein_coding retained_intron MGP_BALBcJ_T0044091.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29615286 29616332 - Rubcn protein_coding retained_intron MGP_BALBcJ_T0044092.1 MGP_BALBcJ_G0022714.1 mouse_genomes_project 16 29643152 29650368 - Rubcn protein_coding processed_transcript MGP_BALBcJ_T0044963.1 MGP_BALBcJ_G0022980.1 mouse_genomes_project 16 86257969 86259163 - MGP_BALBcJ_P0044963 1110025L11Rik protein_coding protein_coding MGP_BALBcJ_T0043480.1 MGP_BALBcJ_G0022563.1 mouse_genomes_project 16 14516138 14519147 - MGP_BALBcJ_P0043480 Slc25a1 protein_coding protein_coding MGP_BALBcJ_T0043481.1 MGP_BALBcJ_G0022563.1 mouse_genomes_project 16 14516609 14518271 - Slc25a1 protein_coding retained_intron MGP_BALBcJ_T0043482.1 MGP_BALBcJ_G0022563.1 mouse_genomes_project 16 14516643 14518344 - MGP_BALBcJ_P0043482 Slc25a1 protein_coding protein_coding MGP_BALBcJ_T0043483.1 MGP_BALBcJ_G0022563.1 mouse_genomes_project 16 14517193 14518815 - Slc25a1 protein_coding retained_intron MGP_BALBcJ_T0043484.1 MGP_BALBcJ_G0022563.1 mouse_genomes_project 16 14518077 14519057 - Slc25a1 protein_coding retained_intron MGP_BALBcJ_T0043485.1 MGP_BALBcJ_G0022563.1 mouse_genomes_project 16 14518344 14519137 - Slc25a1 protein_coding retained_intron MGP_BALBcJ_T0044385.1 MGP_BALBcJ_G0022790.1 mouse_genomes_project 16 35699993 35832766 + MGP_BALBcJ_P0044385 Igsf11 protein_coding protein_coding MGP_BALBcJ_T0044386.1 MGP_BALBcJ_G0022790.1 mouse_genomes_project 16 35700818 35834596 + MGP_BALBcJ_P0044386 Igsf11 protein_coding protein_coding MGP_BALBcJ_T0043095.1 MGP_BALBcJ_G0022480.1 mouse_genomes_project 16 7331835 7332561 - MGP_BALBcJ_P0043095 Prm2 protein_coding protein_coding MGP_BALBcJ_T0043096.1 MGP_BALBcJ_G0022480.1 mouse_genomes_project 16 7331992 7336590 - MGP_BALBcJ_P0043096 Prm2 protein_coding protein_coding MGP_BALBcJ_T0043479.1 MGP_BALBcJ_G0022562.1 mouse_genomes_project 16 14503999 14505952 - MGP_BALBcJ_P0043479 Gsc2 protein_coding protein_coding MGP_BALBcJ_T0044053.1 MGP_BALBcJ_G0022709.1 mouse_genomes_project 16 29384497 29408352 + MGP_BALBcJ_P0044053 Tfrc protein_coding protein_coding MGP_BALBcJ_T0044054.1 MGP_BALBcJ_G0022709.1 mouse_genomes_project 16 29384560 29399260 + MGP_BALBcJ_P0044054 Tfrc protein_coding protein_coding MGP_BALBcJ_T0044055.1 MGP_BALBcJ_G0022709.1 mouse_genomes_project 16 29384827 29388836 + MGP_BALBcJ_P0044055 Tfrc protein_coding protein_coding MGP_BALBcJ_T0044056.1 MGP_BALBcJ_G0022709.1 mouse_genomes_project 16 29390830 29392755 + Tfrc protein_coding retained_intron MGP_BALBcJ_T0044057.1 MGP_BALBcJ_G0022709.1 mouse_genomes_project 16 29393876 29396479 + Tfrc protein_coding retained_intron MGP_BALBcJ_T0044058.1 MGP_BALBcJ_G0022709.1 mouse_genomes_project 16 29399960 29408348 + Tfrc protein_coding retained_intron MGP_BALBcJ_T0043581.1 MGP_BALBcJ_G0022583.1 mouse_genomes_project 16 15384743 15386157 + MGP_BALBcJ_P0043581 Cldn5 protein_coding protein_coding MGP_BALBcJ_T0043244.1 MGP_BALBcJ_G0022516.1 mouse_genomes_project 16 12108543 12146240 - MGP_BALBcJ_P0043244 Ube2v2 protein_coding protein_coding MGP_BALBcJ_T0045243.1 MGP_BALBcJ_G0023044.1 mouse_genomes_project 16 92028902 92280147 - MGP_BALBcJ_P0045243 Kcnj6 protein_coding protein_coding MGP_BALBcJ_T0045244.1 MGP_BALBcJ_G0023044.1 mouse_genomes_project 16 92040880 92280147 - MGP_BALBcJ_P0045244 Kcnj6 protein_coding protein_coding MGP_BALBcJ_T0045245.1 MGP_BALBcJ_G0023044.1 mouse_genomes_project 16 92102891 92137530 - MGP_BALBcJ_P0045245 Kcnj6 protein_coding protein_coding MGP_BALBcJ_T0045146.1 MGP_BALBcJ_G0023024.1 mouse_genomes_project 16 89533375 89545852 + MGP_BALBcJ_P0045146 Smim11 protein_coding protein_coding MGP_BALBcJ_T0045147.1 MGP_BALBcJ_G0023024.1 mouse_genomes_project 16 89533385 89544235 + MGP_BALBcJ_P0045147 Smim11 protein_coding protein_coding MGP_BALBcJ_T0043683.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17221549 17237531 + MGP_BALBcJ_P0043683 protein_coding unknown_likely_coding MGP_BALBcJ_T0043684.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17221581 17230605 + MGP_BALBcJ_P0043684 protein_coding protein_coding MGP_BALBcJ_T0043685.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17221692 17222847 + protein_coding processed_transcript MGP_BALBcJ_T0043686.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17221692 17237525 + MGP_BALBcJ_P0043686 protein_coding protein_coding MGP_BALBcJ_T0043687.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17221694 17223297 + protein_coding processed_transcript MGP_BALBcJ_T0043688.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17221961 17223331 + protein_coding retained_intron MGP_BALBcJ_T0043689.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17222169 17222642 + protein_coding retained_intron MGP_BALBcJ_T0043690.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17222200 17224500 + protein_coding retained_intron MGP_BALBcJ_T0043691.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17222256 17230600 + MGP_BALBcJ_P0043691 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043692.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17223266 17237522 + MGP_BALBcJ_P0043692 protein_coding protein_coding MGP_BALBcJ_T0043693.1 MGP_BALBcJ_G0022612.1 mouse_genomes_project 16 17234912 17237525 + protein_coding retained_intron MGP_BALBcJ_T0011387.1 MGP_BALBcJ_G0009512.1 mouse_genomes_project 16 33295974 33296292 - Gm25902 misc_RNA misc_RNA MGP_BALBcJ_T0043205.1 MGP_BALBcJ_G0022504.1 mouse_genomes_project 16 10480659 10534880 + MGP_BALBcJ_P0043205 Mpv17l protein_coding protein_coding MGP_BALBcJ_T0043206.1 MGP_BALBcJ_G0022504.1 mouse_genomes_project 16 10526046 10534115 + MGP_BALBcJ_P0043206 Mpv17l protein_coding protein_coding MGP_BALBcJ_T0043207.1 MGP_BALBcJ_G0022504.1 mouse_genomes_project 16 10526111 10533974 + MGP_BALBcJ_P0043207 Mpv17l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043208.1 MGP_BALBcJ_G0022504.1 mouse_genomes_project 16 10526118 10532271 + MGP_BALBcJ_P0043208 Mpv17l protein_coding protein_coding MGP_BALBcJ_T0043209.1 MGP_BALBcJ_G0022504.1 mouse_genomes_project 16 10526130 10532317 + MGP_BALBcJ_P0043209 Mpv17l protein_coding protein_coding MGP_BALBcJ_T0043210.1 MGP_BALBcJ_G0022504.1 mouse_genomes_project 16 10526510 10532237 + MGP_BALBcJ_P0043210 Mpv17l protein_coding protein_coding MGP_BALBcJ_T0044131.1 MGP_BALBcJ_G0022721.1 mouse_genomes_project 16 30041266 30091545 + MGP_BALBcJ_P0044131 Snx4 protein_coding protein_coding MGP_BALBcJ_T0043307.1 MGP_BALBcJ_G0022529.1 mouse_genomes_project 16 13458816 13489687 + MGP_BALBcJ_P0043307 Ppm1f protein_coding protein_coding MGP_BALBcJ_T0043308.1 MGP_BALBcJ_G0022529.1 mouse_genomes_project 16 13458921 13477516 + Ppm1f protein_coding processed_transcript MGP_BALBcJ_T0044578.1 MGP_BALBcJ_G0022835.1 mouse_genomes_project 16 45667411 45669321 + MGP_BALBcJ_P0044578 Retnla protein_coding protein_coding MGP_BALBcJ_T0042994.1 MGP_BALBcJ_G0022450.1 mouse_genomes_project 16 1538379 1574292 + MGP_BALBcJ_P0042994 Ubn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0043807.1 MGP_BALBcJ_G0022638.1 mouse_genomes_project 16 19554695 19598383 - MGP_BALBcJ_P0043807 Tbccd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0006821.1 MGP_BALBcJ_G0005620.1 mouse_genomes_project 16 26677086 26716665 - Gm26569 lincRNA lincRNA MGP_BALBcJ_T0043243.1 MGP_BALBcJ_G0022515.1 mouse_genomes_project 16 11462126 11483054 + MGP_BALBcJ_P0043243 Efcab1 protein_coding protein_coding MGP_BALBcJ_T0013171.1 MGP_BALBcJ_G0011268.1 mouse_genomes_project 16 84729007 84729397 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098332.1 MGP_BALBcJ_G0036386.1 mouse_genomes_project 16 33086250 33086344 - pseudogene pseudogene MGP_BALBcJ_T0013100.1 MGP_BALBcJ_G0011197.1 mouse_genomes_project 16 11975266 11976319 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042851.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 320924 349567 + MGP_BALBcJ_P0042851 Naa60 protein_coding protein_coding MGP_BALBcJ_T0042853.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 333816 346104 + MGP_BALBcJ_P0042853 Naa60 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042854.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 333831 352505 + MGP_BALBcJ_P0042854 Naa60 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042855.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 333834 346135 + MGP_BALBcJ_P0042855 Naa60 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042856.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 333843 353529 + MGP_BALBcJ_P0042856 Naa60 protein_coding protein_coding MGP_BALBcJ_T0042857.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 333861 349156 + Naa60 protein_coding retained_intron MGP_BALBcJ_T0042858.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 343130 350570 + MGP_BALBcJ_P0042858 Naa60 protein_coding protein_coding MGP_BALBcJ_T0042859.1 MGP_BALBcJ_G0022419.1 mouse_genomes_project 16 343130 350695 + MGP_BALBcJ_P0042859 Naa60 protein_coding protein_coding MGP_BALBcJ_T0044334.1 MGP_BALBcJ_G0022775.1 mouse_genomes_project 16 35055842 35108084 - MGP_BALBcJ_P0044334 Nr1i2 protein_coding protein_coding MGP_BALBcJ_T0044939.1 MGP_BALBcJ_G0022958.1 mouse_genomes_project 16 85861519 85862165 - MGP_BALBcJ_P0044939 Krtap27-1 protein_coding protein_coding MGP_BALBcJ_T0044613.1 MGP_BALBcJ_G0022844.1 mouse_genomes_project 16 48846541 49025815 + MGP_BALBcJ_P0044613 Cblb protein_coding protein_coding MGP_BALBcJ_T0044614.1 MGP_BALBcJ_G0022844.1 mouse_genomes_project 16 48846657 49025822 + MGP_BALBcJ_P0044614 Cblb protein_coding unknown_likely_coding MGP_BALBcJ_T0044977.1 MGP_BALBcJ_G0022992.1 mouse_genomes_project 16 86763624 86764632 - MGP_BALBcJ_P0044977 Krtap11-1 protein_coding protein_coding MGP_BALBcJ_T0099048.1 MGP_BALBcJ_G0037086.1 mouse_genomes_project 16 89712964 89731971 + 2410124H12Rik sense_overlapping sense_overlapping MGP_BALBcJ_T0043754.1 MGP_BALBcJ_G0022621.1 mouse_genomes_project 16 17358520 17363849 - MGP_BALBcJ_P0043754 Thpo protein_coding protein_coding MGP_BALBcJ_T0043134.1 MGP_BALBcJ_G0022488.1 mouse_genomes_project 16 7752040 7762316 - MGP_BALBcJ_P0043134 Rsl1d1 protein_coding protein_coding MGP_BALBcJ_T0043135.1 MGP_BALBcJ_G0022488.1 mouse_genomes_project 16 7752575 7754066 - Rsl1d1 protein_coding retained_intron MGP_BALBcJ_T0043136.1 MGP_BALBcJ_G0022488.1 mouse_genomes_project 16 7755505 7762249 - Rsl1d1 protein_coding retained_intron MGP_BALBcJ_T0100790.1 MGP_BALBcJ_G0038826.1 mouse_genomes_project 16 28847493 28847626 + Gm26419 snoRNA snoRNA MGP_BALBcJ_T0044750.1 MGP_BALBcJ_G0022888.1 mouse_genomes_project 16 56014461 56016025 - MGP_BALBcJ_P0044750 protein_coding protein_coding MGP_BALBcJ_T0000016.1 MGP_BALBcJ_G0000011.1 mouse_genomes_project 16 15678587 15679041 - MGP_BALBcJ_P0000016 Iglc1 IG_C_gene IG_C_gene MGP_BALBcJ_T0003643.1 MGP_BALBcJ_G0003299.1 mouse_genomes_project 16 22764480 22768346 + Gm4524 antisense antisense MGP_BALBcJ_T0043028.1 MGP_BALBcJ_G0022461.1 mouse_genomes_project 16 5159499 5163325 - MGP_BALBcJ_P0043028 Tmem186 protein_coding protein_coding MGP_BALBcJ_T0010095.1 MGP_BALBcJ_G0008220.1 mouse_genomes_project 16 10391811 10391900 + Gm27734 miRNA miRNA MGP_BALBcJ_T0044855.1 MGP_BALBcJ_G0022929.1 mouse_genomes_project 16 74948244 74954535 + MGP_BALBcJ_P0044855 Gm17333 protein_coding protein_coding MGP_BALBcJ_T0043052.1 MGP_BALBcJ_G0022467.1 mouse_genomes_project 16 6094348 6523039 - MGP_BALBcJ_P0043052 protein_coding protein_coding MGP_BALBcJ_T0043053.1 MGP_BALBcJ_G0022467.1 mouse_genomes_project 16 6291602 6327517 - protein_coding processed_transcript MGP_BALBcJ_T0043054.1 MGP_BALBcJ_G0022467.1 mouse_genomes_project 16 6519769 6523676 - protein_coding retained_intron MGP_BALBcJ_T0043055.1 MGP_BALBcJ_G0022467.1 mouse_genomes_project 16 6519769 6522386 - protein_coding retained_intron MGP_BALBcJ_T0044046.1 MGP_BALBcJ_G0022706.1 mouse_genomes_project 16 29211793 29233208 + Pcyt1a protein_coding retained_intron MGP_BALBcJ_T0044047.1 MGP_BALBcJ_G0022706.1 mouse_genomes_project 16 29211813 29256002 + MGP_BALBcJ_P0044047 Pcyt1a protein_coding protein_coding MGP_BALBcJ_T0044048.1 MGP_BALBcJ_G0022706.1 mouse_genomes_project 16 29211815 29236396 + Pcyt1a protein_coding retained_intron MGP_BALBcJ_T0044049.1 MGP_BALBcJ_G0022706.1 mouse_genomes_project 16 29211875 29236266 + Pcyt1a protein_coding retained_intron MGP_BALBcJ_T0100789.1 MGP_BALBcJ_G0038825.1 mouse_genomes_project 16 28529922 28530065 - Gm24879 snoRNA snoRNA MGP_BALBcJ_T0043465.1 MGP_BALBcJ_G0022555.1 mouse_genomes_project 16 14384303 14395265 + MGP_BALBcJ_P0043465 Scarf2 protein_coding protein_coding MGP_BALBcJ_T0000018.1 MGP_BALBcJ_G0000013.1 mouse_genomes_project 16 15817358 15817672 - MGP_BALBcJ_P0000018 Iglc4 IG_C_gene IG_C_gene MGP_BALBcJ_T0011382.1 MGP_BALBcJ_G0009507.1 mouse_genomes_project 16 4717173 4717447 + Gm23476 misc_RNA misc_RNA MGP_BALBcJ_T0043614.1 MGP_BALBcJ_G0022593.1 mouse_genomes_project 16 16100338 16103781 + MGP_BALBcJ_P0043614 Olfr166 protein_coding protein_coding MGP_BALBcJ_T0010087.1 MGP_BALBcJ_G0008212.1 mouse_genomes_project 16 376418 376506 + Gm23493 miRNA miRNA MGP_BALBcJ_T0045016.1 MGP_BALBcJ_G0023001.1 mouse_genomes_project 16 88135771 88144790 - MGP_BALBcJ_P0045016 1110004E09Rik protein_coding protein_coding MGP_BALBcJ_T0045017.1 MGP_BALBcJ_G0023001.1 mouse_genomes_project 16 88135915 88139946 - MGP_BALBcJ_P0045017 1110004E09Rik protein_coding protein_coding MGP_BALBcJ_T0045018.1 MGP_BALBcJ_G0023001.1 mouse_genomes_project 16 88135932 88144890 - MGP_BALBcJ_P0045018 1110004E09Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045019.1 MGP_BALBcJ_G0023001.1 mouse_genomes_project 16 88137081 88144686 - MGP_BALBcJ_P0045019 1110004E09Rik protein_coding protein_coding MGP_BALBcJ_T0045020.1 MGP_BALBcJ_G0023001.1 mouse_genomes_project 16 88137144 88144469 - MGP_BALBcJ_P0045020 1110004E09Rik protein_coding protein_coding MGP_BALBcJ_T0045021.1 MGP_BALBcJ_G0023001.1 mouse_genomes_project 16 88137342 88144789 - 1110004E09Rik protein_coding processed_transcript MGP_BALBcJ_T0042970.1 MGP_BALBcJ_G0022443.1 mouse_genomes_project 16 1424217 1426127 + MGP_BALBcJ_P0042970 Nudt16l1 protein_coding protein_coding MGP_BALBcJ_T0006866.1 MGP_BALBcJ_G0005652.1 mouse_genomes_project 16 93182298 93183629 + Gm15340 lincRNA lincRNA MGP_BALBcJ_T0099534.1 MGP_BALBcJ_G0037570.1 mouse_genomes_project 16 39904459 39904566 + Gm25873 snRNA snRNA MGP_BALBcJ_T0003641.1 MGP_BALBcJ_G0003297.1 mouse_genomes_project 16 15669044 15720070 + antisense antisense MGP_BALBcJ_T0098848.1 MGP_BALBcJ_G0036897.1 mouse_genomes_project 16 2484537 2507552 + 1700123O21Rik sense_intronic sense_intronic MGP_BALBcJ_T0000946.1 MGP_BALBcJ_G0000876.1 mouse_genomes_project 16 15860487 15863957 + TEC TEC MGP_BALBcJ_T0043155.1 MGP_BALBcJ_G0022493.1 mouse_genomes_project 16 8457156 8486258 + MGP_BALBcJ_P0043155 Gm9961 protein_coding protein_coding MGP_BALBcJ_T0043255.1 MGP_BALBcJ_G0022522.1 mouse_genomes_project 16 12879716 12885896 + MGP_BALBcJ_P0043255 Yars2 protein_coding protein_coding MGP_BALBcJ_T0043256.1 MGP_BALBcJ_G0022522.1 mouse_genomes_project 16 12879725 12884477 + Yars2 protein_coding retained_intron MGP_BALBcJ_T0043257.1 MGP_BALBcJ_G0022522.1 mouse_genomes_project 16 12879729 12886594 + MGP_BALBcJ_P0043257 Yars2 protein_coding protein_coding MGP_BALBcJ_T0043258.1 MGP_BALBcJ_G0022522.1 mouse_genomes_project 16 12879732 12886586 + MGP_BALBcJ_P0043258 Yars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043259.1 MGP_BALBcJ_G0022522.1 mouse_genomes_project 16 12880304 12884195 + Yars2 protein_coding processed_transcript MGP_BALBcJ_T0043260.1 MGP_BALBcJ_G0022522.1 mouse_genomes_project 16 12881351 12884334 + MGP_BALBcJ_P0043260 Yars2 protein_coding protein_coding MGP_BALBcJ_T0044051.1 MGP_BALBcJ_G0022708.1 mouse_genomes_project 16 29276896 29288361 + MGP_BALBcJ_P0044051 Zdhhc19 protein_coding protein_coding MGP_BALBcJ_T0044052.1 MGP_BALBcJ_G0022708.1 mouse_genomes_project 16 29280250 29344620 + Zdhhc19 protein_coding processed_transcript MGP_BALBcJ_T0044730.1 MGP_BALBcJ_G0022879.1 mouse_genomes_project 16 55738245 55739205 - MGP_BALBcJ_P0044730 Olfr178 protein_coding protein_coding MGP_BALBcJ_T0044731.1 MGP_BALBcJ_G0022879.1 mouse_genomes_project 16 55738245 55741046 - MGP_BALBcJ_P0044731 Olfr178 protein_coding protein_coding MGP_BALBcJ_T0043612.1 MGP_BALBcJ_G0022592.1 mouse_genomes_project 16 16027851 16028793 - MGP_BALBcJ_P0043612 protein_coding protein_coding MGP_BALBcJ_T0044542.1 MGP_BALBcJ_G0022823.1 mouse_genomes_project 16 42536728 42550034 - MGP_BALBcJ_P0044542 Tagln3 protein_coding protein_coding MGP_BALBcJ_T0044735.1 MGP_BALBcJ_G0022881.1 mouse_genomes_project 16 55783494 55784598 - MGP_BALBcJ_P0044735 Olfr181 protein_coding protein_coding MGP_BALBcJ_T0044736.1 MGP_BALBcJ_G0022881.1 mouse_genomes_project 16 55783494 55787849 - MGP_BALBcJ_P0044736 Olfr181 protein_coding protein_coding MGP_BALBcJ_T0044737.1 MGP_BALBcJ_G0022881.1 mouse_genomes_project 16 55784122 55787849 - MGP_BALBcJ_P0044737 Olfr181 protein_coding protein_coding MGP_BALBcJ_T0044738.1 MGP_BALBcJ_G0022881.1 mouse_genomes_project 16 55784270 55787813 - MGP_BALBcJ_P0044738 Olfr181 protein_coding protein_coding MGP_BALBcJ_T0003649.1 MGP_BALBcJ_G0003304.1 mouse_genomes_project 16 30571419 30588234 - Gm15658 antisense antisense MGP_BALBcJ_T0043849.1 MGP_BALBcJ_G0022649.1 mouse_genomes_project 16 19999416 20135483 + MGP_BALBcJ_P0043849 St6gal1 protein_coding protein_coding MGP_BALBcJ_T0043850.1 MGP_BALBcJ_G0022649.1 mouse_genomes_project 16 20000737 20096017 + St6gal1 protein_coding processed_transcript MGP_BALBcJ_T0043851.1 MGP_BALBcJ_G0022649.1 mouse_genomes_project 16 20000737 20135485 + MGP_BALBcJ_P0043851 St6gal1 protein_coding protein_coding MGP_BALBcJ_T0043852.1 MGP_BALBcJ_G0022649.1 mouse_genomes_project 16 20045249 20096125 + MGP_BALBcJ_P0043852 St6gal1 protein_coding protein_coding MGP_BALBcJ_T0043853.1 MGP_BALBcJ_G0022649.1 mouse_genomes_project 16 20065612 20133730 + MGP_BALBcJ_P0043853 St6gal1 protein_coding protein_coding MGP_BALBcJ_T0043854.1 MGP_BALBcJ_G0022649.1 mouse_genomes_project 16 20133450 20135483 + St6gal1 protein_coding processed_transcript MGP_BALBcJ_T0044044.1 MGP_BALBcJ_G0022705.1 mouse_genomes_project 16 29199765 29209044 + Tctex1d2 protein_coding retained_intron MGP_BALBcJ_T0044045.1 MGP_BALBcJ_G0022705.1 mouse_genomes_project 16 29199779 29209046 + MGP_BALBcJ_P0044045 Tctex1d2 protein_coding protein_coding MGP_BALBcJ_T0044249.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33537430 33567254 - MGP_BALBcJ_P0044249 Slc15a2 protein_coding protein_coding MGP_BALBcJ_T0044250.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33539030 33567112 - MGP_BALBcJ_P0044250 Slc15a2 protein_coding protein_coding MGP_BALBcJ_T0044251.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33539030 33567084 - MGP_BALBcJ_P0044251 Slc15a2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044252.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33539568 33542011 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044253.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33541710 33542660 - Slc15a2 protein_coding processed_transcript MGP_BALBcJ_T0044254.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33543150 33543957 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044255.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33544374 33550107 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044256.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33544421 33549917 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044257.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33548451 33549833 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044258.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33554168 33567232 - MGP_BALBcJ_P0044258 Slc15a2 protein_coding protein_coding MGP_BALBcJ_T0044259.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33554171 33567216 - MGP_BALBcJ_P0044259 Slc15a2 protein_coding protein_coding MGP_BALBcJ_T0044260.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33554365 33555573 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044261.1 MGP_BALBcJ_G0022758.1 mouse_genomes_project 16 33563677 33564757 - Slc15a2 protein_coding retained_intron MGP_BALBcJ_T0044941.1 MGP_BALBcJ_G0022960.1 mouse_genomes_project 16 85922586 85923334 + MGP_BALBcJ_P0044941 Krtap13-1 protein_coding protein_coding MGP_BALBcJ_T0044397.1 MGP_BALBcJ_G0022792.1 mouse_genomes_project 16 39029743 39123644 - MGP_BALBcJ_P0044397 Gap43 protein_coding protein_coding MGP_BALBcJ_T0044398.1 MGP_BALBcJ_G0022792.1 mouse_genomes_project 16 39029759 39058527 - Gap43 protein_coding processed_transcript MGP_BALBcJ_T0100818.1 MGP_BALBcJ_G0038854.1 mouse_genomes_project 16 82324219 82324372 + Gm27295 snoRNA snoRNA MGP_BALBcJ_T0098336.1 MGP_BALBcJ_G0036390.1 mouse_genomes_project 16 85953467 85954097 + pseudogene pseudogene MGP_BALBcJ_T0003680.1 MGP_BALBcJ_G0003326.1 mouse_genomes_project 16 93374571 93381392 + 1700093J21Rik antisense antisense MGP_BALBcJ_T0100812.1 MGP_BALBcJ_G0038848.1 mouse_genomes_project 16 71119305 71119440 - Gm22163 snoRNA snoRNA MGP_BALBcJ_T0003666.1 MGP_BALBcJ_G0003317.1 mouse_genomes_project 16 42772368 42798096 + Gm15638 antisense antisense MGP_BALBcJ_T0003667.1 MGP_BALBcJ_G0003317.1 mouse_genomes_project 16 42772375 42784039 + Gm15638 antisense antisense MGP_BALBcJ_T0003668.1 MGP_BALBcJ_G0003317.1 mouse_genomes_project 16 42772380 42775435 + Gm15638 antisense antisense MGP_BALBcJ_T0010145.1 MGP_BALBcJ_G0008270.1 mouse_genomes_project 16 90312473 90312541 + Gm28003 miRNA miRNA MGP_BALBcJ_T0010094.1 MGP_BALBcJ_G0008219.1 mouse_genomes_project 16 10031017 10031118 - Mir6365 miRNA miRNA MGP_BALBcJ_T0044115.1 MGP_BALBcJ_G0022717.1 mouse_genomes_project 16 29798794 29838495 - MGP_BALBcJ_P0044115 Iqcg protein_coding protein_coding MGP_BALBcJ_T0044116.1 MGP_BALBcJ_G0022717.1 mouse_genomes_project 16 29800383 29807016 - Iqcg protein_coding processed_transcript MGP_BALBcJ_T0044117.1 MGP_BALBcJ_G0022717.1 mouse_genomes_project 16 29823403 29838523 - MGP_BALBcJ_P0044117 Iqcg protein_coding protein_coding MGP_BALBcJ_T0044118.1 MGP_BALBcJ_G0022717.1 mouse_genomes_project 16 29831732 29838490 - Iqcg protein_coding retained_intron MGP_BALBcJ_T0011787.1 MGP_BALBcJ_G0009906.1 mouse_genomes_project 16 94852896 94879359 + MGP_BALBcJ_P0011787 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011788.1 MGP_BALBcJ_G0009906.1 mouse_genomes_project 16 94853666 94879920 + MGP_BALBcJ_P0011788 polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011789.1 MGP_BALBcJ_G0009906.1 mouse_genomes_project 16 94853668 94879919 + MGP_BALBcJ_P0011789 polymorphic_pseudogene protein_coding MGP_BALBcJ_T0011790.1 MGP_BALBcJ_G0009906.1 mouse_genomes_project 16 94869083 94870667 + polymorphic_pseudogene processed_transcript MGP_BALBcJ_T0011791.1 MGP_BALBcJ_G0009906.1 mouse_genomes_project 16 94877431 94879538 + polymorphic_pseudogene retained_intron MGP_BALBcJ_T0013150.1 MGP_BALBcJ_G0011247.1 mouse_genomes_project 16 46111994 46113507 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0000964.1 MGP_BALBcJ_G0000893.1 mouse_genomes_project 16 74634211 74636535 + TEC TEC MGP_BALBcJ_T0044130.1 MGP_BALBcJ_G0022720.1 mouse_genomes_project 16 29969299 30033141 + MGP_BALBcJ_P0044130 Osbpl11 protein_coding protein_coding MGP_BALBcJ_T0043900.1 MGP_BALBcJ_G0022668.1 mouse_genomes_project 16 24940436 25224272 - MGP_BALBcJ_P0043900 Fgf12 protein_coding protein_coding MGP_BALBcJ_T0043856.1 MGP_BALBcJ_G0022651.1 mouse_genomes_project 16 20227525 20298109 - MGP_BALBcJ_P0043856 Masp1 protein_coding protein_coding MGP_BALBcJ_T0043857.1 MGP_BALBcJ_G0022651.1 mouse_genomes_project 16 20256467 20298069 - MGP_BALBcJ_P0043857 Masp1 protein_coding unknown_likely_coding MGP_BALBcJ_T0013099.1 MGP_BALBcJ_G0011196.1 mouse_genomes_project 16 11775227 11775697 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010104.1 MGP_BALBcJ_G0008229.1 mouse_genomes_project 16 14956134 14956205 - Gm26219 miRNA miRNA MGP_BALBcJ_T0044516.1 MGP_BALBcJ_G0022816.1 mouse_genomes_project 16 42033878 42063647 + MGP_BALBcJ_P0044516 Btla protein_coding protein_coding MGP_BALBcJ_T0044517.1 MGP_BALBcJ_G0022816.1 mouse_genomes_project 16 42033900 42063650 + MGP_BALBcJ_P0044517 Btla protein_coding protein_coding MGP_BALBcJ_T0044329.1 MGP_BALBcJ_G0022773.1 mouse_genomes_project 16 34722886 34814071 + MGP_BALBcJ_P0044329 Gpr156 protein_coding protein_coding MGP_BALBcJ_T0099501.1 MGP_BALBcJ_G0037537.1 mouse_genomes_project 16 1548218 1548326 - Gm23483 snRNA snRNA MGP_BALBcJ_T0099523.1 MGP_BALBcJ_G0037559.1 mouse_genomes_project 16 32976329 32976436 - Gm22349 snRNA snRNA MGP_BALBcJ_T0044286.1 MGP_BALBcJ_G0022763.1 mouse_genomes_project 16 33747960 33770358 - MGP_BALBcJ_P0044286 Fbxo40 protein_coding protein_coding MGP_BALBcJ_T0044287.1 MGP_BALBcJ_G0022763.1 mouse_genomes_project 16 33750431 33758583 - Fbxo40 protein_coding processed_transcript MGP_BALBcJ_T0044288.1 MGP_BALBcJ_G0022763.1 mouse_genomes_project 16 33750540 33755270 - Fbxo40 protein_coding retained_intron MGP_BALBcJ_T0044289.1 MGP_BALBcJ_G0022763.1 mouse_genomes_project 16 33750573 33758943 - MGP_BALBcJ_P0044289 Fbxo40 protein_coding protein_coding MGP_BALBcJ_T0043780.1 MGP_BALBcJ_G0022629.1 mouse_genomes_project 16 18656673 18664287 - MGP_BALBcJ_P0043780 Tmem41a protein_coding protein_coding MGP_BALBcJ_T0000965.1 MGP_BALBcJ_G0000894.1 mouse_genomes_project 16 74656064 74659180 + TEC TEC MGP_BALBcJ_T0045155.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 89837130 90062347 - MGP_BALBcJ_P0045155 Runx1 protein_coding protein_coding MGP_BALBcJ_T0045156.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 89839344 89932736 - MGP_BALBcJ_P0045156 Runx1 protein_coding protein_coding MGP_BALBcJ_T0045157.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 89841093 89931537 - MGP_BALBcJ_P0045157 Runx1 protein_coding protein_coding MGP_BALBcJ_T0045158.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 89922346 89930907 - MGP_BALBcJ_P0045158 Runx1 protein_coding protein_coding MGP_BALBcJ_T0045159.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 89922379 89932733 - Runx1 protein_coding retained_intron MGP_BALBcJ_T0045160.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 89931003 90061976 - MGP_BALBcJ_P0045160 Runx1 protein_coding protein_coding MGP_BALBcJ_T0045161.1 MGP_BALBcJ_G0023029.1 mouse_genomes_project 16 90051625 90062272 - MGP_BALBcJ_P0045161 Runx1 protein_coding protein_coding MGP_BALBcJ_T0010097.1 MGP_BALBcJ_G0008222.1 mouse_genomes_project 16 10745405 10745472 + Mir484 miRNA miRNA MGP_BALBcJ_T0044677.1 MGP_BALBcJ_G0022859.1 mouse_genomes_project 16 53639486 53729904 - MGP_BALBcJ_P0044677 Tmem45a protein_coding protein_coding MGP_BALBcJ_T0044678.1 MGP_BALBcJ_G0022859.1 mouse_genomes_project 16 53640816 53643876 - Tmem45a protein_coding processed_transcript MGP_BALBcJ_T0044679.1 MGP_BALBcJ_G0022859.1 mouse_genomes_project 16 53659181 53665819 - MGP_BALBcJ_P0044679 Tmem45a protein_coding protein_coding MGP_BALBcJ_T0043823.1 MGP_BALBcJ_G0022644.1 mouse_genomes_project 16 19802125 19841078 + MGP_BALBcJ_P0043823 Kng1 protein_coding protein_coding MGP_BALBcJ_T0043824.1 MGP_BALBcJ_G0022644.1 mouse_genomes_project 16 19809450 19841078 + Kng1 protein_coding processed_transcript MGP_BALBcJ_T0043825.1 MGP_BALBcJ_G0022644.1 mouse_genomes_project 16 19809450 19832469 + MGP_BALBcJ_P0043825 Kng1 protein_coding unknown_likely_coding MGP_BALBcJ_T0045031.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88224015 88254886 - MGP_BALBcJ_P0045031 Paxbp1 protein_coding protein_coding MGP_BALBcJ_T0045032.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88224894 88254507 - MGP_BALBcJ_P0045032 Paxbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045033.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88226827 88229199 - Paxbp1 protein_coding processed_transcript MGP_BALBcJ_T0045034.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88234778 88240784 - Paxbp1 protein_coding retained_intron MGP_BALBcJ_T0045035.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88235523 88240482 - MGP_BALBcJ_P0045035 Paxbp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045036.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88235642 88237606 - Paxbp1 protein_coding retained_intron MGP_BALBcJ_T0045037.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88240416 88244860 - Paxbp1 protein_coding retained_intron MGP_BALBcJ_T0045038.1 MGP_BALBcJ_G0023003.1 mouse_genomes_project 16 88241531 88254697 - Paxbp1 protein_coding processed_transcript MGP_BALBcJ_T0043808.1 MGP_BALBcJ_G0022639.1 mouse_genomes_project 16 19598715 19613342 + MGP_BALBcJ_P0043808 Dnajb11 protein_coding protein_coding MGP_BALBcJ_T0043809.1 MGP_BALBcJ_G0022639.1 mouse_genomes_project 16 19598715 19613265 + MGP_BALBcJ_P0043809 Dnajb11 protein_coding protein_coding MGP_BALBcJ_T0043810.1 MGP_BALBcJ_G0022639.1 mouse_genomes_project 16 19598715 19620511 + MGP_BALBcJ_P0043810 Dnajb11 protein_coding protein_coding MGP_BALBcJ_T0043811.1 MGP_BALBcJ_G0022639.1 mouse_genomes_project 16 19598776 19612981 + Dnajb11 protein_coding processed_transcript MGP_BALBcJ_T0043812.1 MGP_BALBcJ_G0022639.1 mouse_genomes_project 16 19610303 19613183 + Dnajb11 protein_coding processed_transcript MGP_BALBcJ_T0043156.1 MGP_BALBcJ_G0022494.1 mouse_genomes_project 16 8542487 8553763 + Shisa9 protein_coding processed_transcript MGP_BALBcJ_T0043157.1 MGP_BALBcJ_G0022494.1 mouse_genomes_project 16 8542955 8832424 + MGP_BALBcJ_P0043157 Shisa9 protein_coding protein_coding MGP_BALBcJ_T0043158.1 MGP_BALBcJ_G0022494.1 mouse_genomes_project 16 8542955 8833377 + MGP_BALBcJ_P0043158 Shisa9 protein_coding protein_coding MGP_BALBcJ_T0043159.1 MGP_BALBcJ_G0022494.1 mouse_genomes_project 16 8543052 8548458 + Shisa9 protein_coding processed_transcript MGP_BALBcJ_T0043385.1 MGP_BALBcJ_G0022545.1 mouse_genomes_project 16 14056863 14079725 + MGP_BALBcJ_P0043385 Aifm3 protein_coding protein_coding MGP_BALBcJ_T0043386.1 MGP_BALBcJ_G0022545.1 mouse_genomes_project 16 14056915 14079725 + MGP_BALBcJ_P0043386 Aifm3 protein_coding protein_coding MGP_BALBcJ_T0043387.1 MGP_BALBcJ_G0022545.1 mouse_genomes_project 16 14057099 14077646 + Aifm3 protein_coding retained_intron MGP_BALBcJ_T0043388.1 MGP_BALBcJ_G0022545.1 mouse_genomes_project 16 14069662 14079721 + Aifm3 protein_coding retained_intron MGP_BALBcJ_T0043389.1 MGP_BALBcJ_G0022545.1 mouse_genomes_project 16 14074481 14075942 + Aifm3 protein_coding retained_intron MGP_BALBcJ_T0043390.1 MGP_BALBcJ_G0022545.1 mouse_genomes_project 16 14075131 14078164 + Aifm3 protein_coding retained_intron MGP_BALBcJ_T0044978.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86985984 87058258 - MGP_BALBcJ_P0044978 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044979.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86985984 87175932 - MGP_BALBcJ_P0044979 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044980.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86985984 87163872 - MGP_BALBcJ_P0044980 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044981.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86985984 87175932 - MGP_BALBcJ_P0044981 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044982.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86985989 86996920 - MGP_BALBcJ_P0044982 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044983.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86986608 87017533 - MGP_BALBcJ_P0044983 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044984.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86986736 87038312 - Tiam1 protein_coding retained_intron MGP_BALBcJ_T0044985.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86987300 86994161 - Tiam1 protein_coding processed_transcript MGP_BALBcJ_T0044986.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 86990563 86998869 - MGP_BALBcJ_P0044986 Tiam1 protein_coding protein_coding MGP_BALBcJ_T0044987.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 87098293 87175932 - Tiam1 protein_coding processed_transcript MGP_BALBcJ_T0044988.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 87098334 87163782 - Tiam1 protein_coding processed_transcript MGP_BALBcJ_T0044989.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 87098404 87120062 - Tiam1 protein_coding processed_transcript MGP_BALBcJ_T0044990.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 87109293 87158368 - Tiam1 protein_coding retained_intron MGP_BALBcJ_T0044991.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 87109622 87175132 - Tiam1 protein_coding processed_transcript MGP_BALBcJ_T0044992.1 MGP_BALBcJ_G0022993.1 mouse_genomes_project 16 87158225 87181311 - Tiam1 protein_coding processed_transcript MGP_BALBcJ_T0010146.1 MGP_BALBcJ_G0008271.1 mouse_genomes_project 16 90618377 90618474 + Mir802 miRNA miRNA MGP_BALBcJ_T0043165.1 MGP_BALBcJ_G0022496.1 mouse_genomes_project 16 9811932 9975394 + MGP_BALBcJ_P0043165 Mkl2 protein_coding protein_coding MGP_BALBcJ_T0043166.1 MGP_BALBcJ_G0022496.1 mouse_genomes_project 16 9811957 9891359 + MGP_BALBcJ_P0043166 Mkl2 protein_coding protein_coding MGP_BALBcJ_T0043167.1 MGP_BALBcJ_G0022496.1 mouse_genomes_project 16 9821073 9891356 + MGP_BALBcJ_P0043167 Mkl2 protein_coding protein_coding MGP_BALBcJ_T0043168.1 MGP_BALBcJ_G0022496.1 mouse_genomes_project 16 9916795 9977805 + MGP_BALBcJ_P0043168 Mkl2 protein_coding protein_coding MGP_BALBcJ_T0044622.1 MGP_BALBcJ_G0022846.1 mouse_genomes_project 16 52049976 52108945 - MGP_BALBcJ_P0044622 Zpld1 protein_coding protein_coding MGP_BALBcJ_T0044623.1 MGP_BALBcJ_G0022846.1 mouse_genomes_project 16 52049976 52123201 - MGP_BALBcJ_P0044623 Zpld1 protein_coding protein_coding MGP_BALBcJ_T0044351.1 MGP_BALBcJ_G0022781.1 mouse_genomes_project 16 35260198 35267478 - MGP_BALBcJ_P0044351 Adprh protein_coding protein_coding MGP_BALBcJ_T0013173.1 MGP_BALBcJ_G0011270.1 mouse_genomes_project 16 88730583 88732083 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010135.1 MGP_BALBcJ_G0008260.1 mouse_genomes_project 16 71414623 71414701 - Mir691 miRNA miRNA MGP_BALBcJ_T0010136.1 MGP_BALBcJ_G0008261.1 mouse_genomes_project 16 72842094 72842204 + Gm22923 miRNA miRNA MGP_BALBcJ_T0043841.1 MGP_BALBcJ_G0022646.1 mouse_genomes_project 16 19888900 19903464 - MGP_BALBcJ_P0043841 Rfc4 protein_coding protein_coding MGP_BALBcJ_T0043842.1 MGP_BALBcJ_G0022646.1 mouse_genomes_project 16 19888900 19903444 - MGP_BALBcJ_P0043842 Rfc4 protein_coding protein_coding MGP_BALBcJ_T0043843.1 MGP_BALBcJ_G0022646.1 mouse_genomes_project 16 19888940 19889690 - Rfc4 protein_coding retained_intron MGP_BALBcJ_T0043844.1 MGP_BALBcJ_G0022646.1 mouse_genomes_project 16 19889652 19903418 - MGP_BALBcJ_P0043844 Rfc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043845.1 MGP_BALBcJ_G0022646.1 mouse_genomes_project 16 19895885 19903455 - MGP_BALBcJ_P0043845 Rfc4 protein_coding protein_coding MGP_BALBcJ_T0010138.1 MGP_BALBcJ_G0008263.1 mouse_genomes_project 16 74694179 74694273 + Mirlet7c-1 miRNA miRNA MGP_BALBcJ_T0017464.1 MGP_BALBcJ_G0015260.1 mouse_genomes_project 16 56491153 56534710 - Crybg3 processed_transcript processed_transcript MGP_BALBcJ_T0006812.1 MGP_BALBcJ_G0005613.1 mouse_genomes_project 16 17951512 18001933 - lincRNA lincRNA MGP_BALBcJ_T0044352.1 MGP_BALBcJ_G0022782.1 mouse_genomes_project 16 35273666 35303475 + MGP_BALBcJ_P0044352 Cd80 protein_coding protein_coding MGP_BALBcJ_T0044859.1 MGP_BALBcJ_G0022932.1 mouse_genomes_project 16 75463405 75481430 - MGP_BALBcJ_P0044859 Gm7334 protein_coding protein_coding MGP_BALBcJ_T0017463.1 MGP_BALBcJ_G0015259.1 mouse_genomes_project 16 55209155 55212537 - 4930461C15Rik processed_transcript processed_transcript MGP_BALBcJ_T0100779.1 MGP_BALBcJ_G0038815.1 mouse_genomes_project 16 15936329 15936455 + Gm22158 snoRNA snoRNA MGP_BALBcJ_T0045067.1 MGP_BALBcJ_G0023014.1 mouse_genomes_project 16 88834047 88838790 - MGP_BALBcJ_P0045067 Dnajc28 protein_coding protein_coding MGP_BALBcJ_T0045068.1 MGP_BALBcJ_G0023014.1 mouse_genomes_project 16 88835516 88838785 - MGP_BALBcJ_P0045068 Dnajc28 protein_coding protein_coding MGP_BALBcJ_T0045069.1 MGP_BALBcJ_G0023014.1 mouse_genomes_project 16 88836627 88838782 - MGP_BALBcJ_P0045069 Dnajc28 protein_coding protein_coding MGP_BALBcJ_T0045070.1 MGP_BALBcJ_G0023014.1 mouse_genomes_project 16 88836892 88838817 - MGP_BALBcJ_P0045070 Dnajc28 protein_coding protein_coding MGP_BALBcJ_T0010120.1 MGP_BALBcJ_G0008245.1 mouse_genomes_project 16 38017008 38017068 + miRNA miRNA MGP_BALBcJ_T0099522.1 MGP_BALBcJ_G0037558.1 mouse_genomes_project 16 32956482 32956585 - Gm23080 snRNA snRNA MGP_BALBcJ_T0013098.1 MGP_BALBcJ_G0011195.1 mouse_genomes_project 16 10652059 10652663 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044104.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696747 29799055 + MGP_BALBcJ_P0044104 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044105.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696769 29796551 + MGP_BALBcJ_P0044105 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044106.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696769 29796551 + MGP_BALBcJ_P0044106 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044107.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696770 29772835 + Lrch3 protein_coding retained_intron MGP_BALBcJ_T0044108.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696774 29757679 + MGP_BALBcJ_P0044108 Lrch3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044109.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696789 29795898 + MGP_BALBcJ_P0044109 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044110.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29696789 29796107 + MGP_BALBcJ_P0044110 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044111.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29738764 29745831 + Lrch3 protein_coding processed_transcript MGP_BALBcJ_T0044112.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29763140 29782352 + MGP_BALBcJ_P0044112 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044113.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29763168 29782294 + MGP_BALBcJ_P0044113 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0044114.1 MGP_BALBcJ_G0022716.1 mouse_genomes_project 16 29769772 29782405 + MGP_BALBcJ_P0044114 Lrch3 protein_coding protein_coding MGP_BALBcJ_T0013128.1 MGP_BALBcJ_G0011225.1 mouse_genomes_project 16 29367084 29367693 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043468.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14426624 14480464 - protein_coding retained_intron MGP_BALBcJ_T0043469.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14427497 14480470 - MGP_BALBcJ_P0043469 protein_coding protein_coding MGP_BALBcJ_T0043470.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14427497 14480503 - MGP_BALBcJ_P0043470 protein_coding protein_coding MGP_BALBcJ_T0043471.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14427503 14480467 - MGP_BALBcJ_P0043471 protein_coding protein_coding MGP_BALBcJ_T0043472.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14428452 14480403 - MGP_BALBcJ_P0043472 protein_coding protein_coding MGP_BALBcJ_T0043473.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14436453 14480459 - protein_coding retained_intron MGP_BALBcJ_T0043474.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14444056 14482909 - protein_coding processed_transcript MGP_BALBcJ_T0043475.1 MGP_BALBcJ_G0022558.1 mouse_genomes_project 16 14481384 14482955 - protein_coding processed_transcript MGP_BALBcJ_T0099509.1 MGP_BALBcJ_G0037545.1 mouse_genomes_project 16 13909874 13909981 - Gm24927 snRNA snRNA MGP_BALBcJ_T0043142.1 MGP_BALBcJ_G0022490.1 mouse_genomes_project 16 7876459 7882707 + MGP_BALBcJ_P0043142 Tnfrsf17 protein_coding protein_coding MGP_BALBcJ_T0044996.1 MGP_BALBcJ_G0022996.1 mouse_genomes_project 16 87586748 87704488 + MGP_BALBcJ_P0044996 Hunk protein_coding protein_coding MGP_BALBcJ_T0045324.1 MGP_BALBcJ_G0023056.1 mouse_genomes_project 16 93724520 93745841 - MGP_BALBcJ_P0045324 Itgb2l protein_coding protein_coding MGP_BALBcJ_T0045325.1 MGP_BALBcJ_G0023056.1 mouse_genomes_project 16 93724524 93745836 - MGP_BALBcJ_P0045325 Itgb2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045326.1 MGP_BALBcJ_G0023056.1 mouse_genomes_project 16 93724608 93745834 - MGP_BALBcJ_P0045326 Itgb2l protein_coding protein_coding MGP_BALBcJ_T0045327.1 MGP_BALBcJ_G0023056.1 mouse_genomes_project 16 93728962 93731377 - Itgb2l protein_coding processed_transcript MGP_BALBcJ_T0013095.1 MGP_BALBcJ_G0011192.1 mouse_genomes_project 16 9319476 9320811 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044875.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81976163 81982540 - MGP_BALBcJ_P0044875 Atp5j protein_coding protein_coding MGP_BALBcJ_T0044876.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81976168 81977111 - Atp5j protein_coding retained_intron MGP_BALBcJ_T0044877.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81976168 81983799 - MGP_BALBcJ_P0044877 Atp5j protein_coding protein_coding MGP_BALBcJ_T0044878.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81976168 81983970 - MGP_BALBcJ_P0044878 Atp5j protein_coding protein_coding MGP_BALBcJ_T0044879.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81976171 81979908 - Atp5j protein_coding retained_intron MGP_BALBcJ_T0044880.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81976736 81983898 - MGP_BALBcJ_P0044880 Atp5j protein_coding protein_coding MGP_BALBcJ_T0044881.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81977840 81982177 - Atp5j protein_coding processed_transcript MGP_BALBcJ_T0044882.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81979371 81983594 - Atp5j protein_coding retained_intron MGP_BALBcJ_T0044883.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81979629 81983451 - Atp5j protein_coding processed_transcript MGP_BALBcJ_T0044884.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81979669 81983301 - Atp5j protein_coding processed_transcript MGP_BALBcJ_T0044885.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81981823 81983128 - Atp5j protein_coding retained_intron MGP_BALBcJ_T0044886.1 MGP_BALBcJ_G0022939.1 mouse_genomes_project 16 81982576 81983825 - Atp5j protein_coding retained_intron MGP_BALBcJ_T0043488.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14642123 14661486 + MGP_BALBcJ_P0043488 Dgcr6 protein_coding protein_coding MGP_BALBcJ_T0043489.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14642139 14645823 + Dgcr6 protein_coding processed_transcript MGP_BALBcJ_T0043490.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14642155 14656287 + Dgcr6 protein_coding processed_transcript MGP_BALBcJ_T0043492.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14654937 14661468 + MGP_BALBcJ_P0043492 Dgcr6 protein_coding protein_coding MGP_BALBcJ_T0043493.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14656173 14661763 + MGP_BALBcJ_P0043493 Dgcr6 protein_coding protein_coding MGP_BALBcJ_T0043494.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14656221 14661484 + MGP_BALBcJ_P0043494 Dgcr6 protein_coding protein_coding MGP_BALBcJ_T0043495.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14656226 14661758 + MGP_BALBcJ_P0043495 Dgcr6 protein_coding protein_coding MGP_BALBcJ_T0043496.1 MGP_BALBcJ_G0022566.1 mouse_genomes_project 16 14659605 14661469 + Dgcr6 protein_coding processed_transcript MGP_BALBcJ_T0043211.1 MGP_BALBcJ_G0022505.1 mouse_genomes_project 16 10570554 10575710 - MGP_BALBcJ_P0043211 Ifitm7 protein_coding protein_coding MGP_BALBcJ_T0043212.1 MGP_BALBcJ_G0022505.1 mouse_genomes_project 16 10571651 10573478 - MGP_BALBcJ_P0043212 Ifitm7 protein_coding protein_coding MGP_BALBcJ_T0010148.1 MGP_BALBcJ_G0008273.1 mouse_genomes_project 16 93331759 93331883 - Gm27833 miRNA miRNA MGP_BALBcJ_T0043261.1 MGP_BALBcJ_G0022523.1 mouse_genomes_project 16 12889138 12936531 - MGP_BALBcJ_P0043261 Dnm1l protein_coding protein_coding MGP_BALBcJ_T0043262.1 MGP_BALBcJ_G0022523.1 mouse_genomes_project 16 12889138 12936531 - MGP_BALBcJ_P0043262 Dnm1l protein_coding protein_coding MGP_BALBcJ_T0043263.1 MGP_BALBcJ_G0022523.1 mouse_genomes_project 16 12889138 12936531 - MGP_BALBcJ_P0043263 Dnm1l protein_coding protein_coding MGP_BALBcJ_T0043383.1 MGP_BALBcJ_G0022543.1 mouse_genomes_project 16 13976650 14001288 + MGP_BALBcJ_P0043383 Snap29 protein_coding protein_coding MGP_BALBcJ_T0099543.1 MGP_BALBcJ_G0037579.1 mouse_genomes_project 16 60688304 60688402 - Gm22769 snRNA snRNA MGP_BALBcJ_T0098530.1 MGP_BALBcJ_G0036584.1 mouse_genomes_project 16 38016976 38017068 + Gm26381 rRNA rRNA MGP_BALBcJ_T0043585.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420047 15423602 + MGP_BALBcJ_P0043585 Ufd1l protein_coding protein_coding MGP_BALBcJ_T0043586.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420092 15442541 + MGP_BALBcJ_P0043586 Ufd1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043587.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420100 15443487 + MGP_BALBcJ_P0043587 Ufd1l protein_coding protein_coding MGP_BALBcJ_T0043588.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420562 15424155 + Ufd1l protein_coding processed_transcript MGP_BALBcJ_T0043589.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420562 15443492 + MGP_BALBcJ_P0043589 Ufd1l protein_coding protein_coding MGP_BALBcJ_T0043590.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420589 15435928 + MGP_BALBcJ_P0043590 Ufd1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043591.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15420624 15433287 + MGP_BALBcJ_P0043591 Ufd1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043592.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15431470 15442485 + Ufd1l protein_coding retained_intron MGP_BALBcJ_T0043593.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15435291 15436686 + MGP_BALBcJ_P0043593 Ufd1l protein_coding protein_coding MGP_BALBcJ_T0043594.1 MGP_BALBcJ_G0022585.1 mouse_genomes_project 16 15435479 15442635 + Ufd1l protein_coding retained_intron MGP_BALBcJ_T0100819.1 MGP_BALBcJ_G0038855.1 mouse_genomes_project 16 84032088 84032213 + Gm25715 snoRNA snoRNA MGP_BALBcJ_T0099517.1 MGP_BALBcJ_G0037553.1 mouse_genomes_project 16 21205261 21205324 - Gm24440 snRNA snRNA MGP_BALBcJ_T0099505.1 MGP_BALBcJ_G0037541.1 mouse_genomes_project 16 7539168 7539352 + Gm24961 snRNA snRNA MGP_BALBcJ_T0003654.1 MGP_BALBcJ_G0003307.1 mouse_genomes_project 16 31737889 31741365 - 1700119H24Rik antisense antisense MGP_BALBcJ_T0045096.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 88905539 89149893 - MGP_BALBcJ_P0045096 Atp5o protein_coding protein_coding MGP_BALBcJ_T0045134.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 89148124 89154596 - MGP_BALBcJ_P0045134 Atp5o protein_coding protein_coding MGP_BALBcJ_T0045135.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 89148129 89149595 - Atp5o protein_coding retained_intron MGP_BALBcJ_T0045136.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 89148131 89154457 - MGP_BALBcJ_P0045136 Atp5o protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045137.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 89148223 89154185 - Atp5o protein_coding processed_transcript MGP_BALBcJ_T0045138.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 89149769 89154329 - Atp5o protein_coding processed_transcript MGP_BALBcJ_T0045139.1 MGP_BALBcJ_G0023018.1 mouse_genomes_project 16 89151071 89154462 - Atp5o protein_coding retained_intron MGP_BALBcJ_T0100781.1 MGP_BALBcJ_G0038817.1 mouse_genomes_project 16 17317477 17317552 + Snord66 snoRNA snoRNA MGP_BALBcJ_T0044790.1 MGP_BALBcJ_G0022907.1 mouse_genomes_project 16 59823845 59899630 + MGP_BALBcJ_P0044790 Pros1 protein_coding protein_coding MGP_BALBcJ_T0044791.1 MGP_BALBcJ_G0022907.1 mouse_genomes_project 16 59868846 59871031 + Pros1 protein_coding retained_intron MGP_BALBcJ_T0044792.1 MGP_BALBcJ_G0022907.1 mouse_genomes_project 16 59891762 59898674 + Pros1 protein_coding processed_transcript MGP_BALBcJ_T0045087.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88898409 88905577 - MGP_BALBcJ_P0045087 Donson protein_coding protein_coding MGP_BALBcJ_T0045088.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900402 88909856 - MGP_BALBcJ_P0045088 Donson protein_coding protein_coding MGP_BALBcJ_T0045089.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900406 88909909 - Donson protein_coding retained_intron MGP_BALBcJ_T0045090.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900406 88909909 - MGP_BALBcJ_P0045090 Donson protein_coding protein_coding MGP_BALBcJ_T0045091.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900406 88909909 - MGP_BALBcJ_P0045091 Donson protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045092.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900663 88909019 - MGP_BALBcJ_P0045092 Donson protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045093.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900663 88909861 - MGP_BALBcJ_P0045093 Donson protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045094.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900663 88909019 - MGP_BALBcJ_P0045094 Donson protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045095.1 MGP_BALBcJ_G0023017.1 mouse_genomes_project 16 88900969 88909847 - MGP_BALBcJ_P0045095 Donson protein_coding protein_coding MGP_BALBcJ_T0013132.1 MGP_BALBcJ_G0011229.1 mouse_genomes_project 16 33991651 33992498 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013133.1 MGP_BALBcJ_G0011230.1 mouse_genomes_project 16 35299053 35300226 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043143.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 7885562 8311327 + MGP_BALBcJ_P0043143 Snx29 protein_coding protein_coding MGP_BALBcJ_T0043144.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 7885626 7965619 + MGP_BALBcJ_P0043144 Snx29 protein_coding protein_coding MGP_BALBcJ_T0043145.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 7967430 8311327 + MGP_BALBcJ_P0043145 Snx29 protein_coding protein_coding MGP_BALBcJ_T0043146.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 7968439 8222185 + MGP_BALBcJ_P0043146 Snx29 protein_coding protein_coding MGP_BALBcJ_T0043147.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 7982809 8239941 + MGP_BALBcJ_P0043147 Snx29 protein_coding protein_coding MGP_BALBcJ_T0043148.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 8006797 8193105 + Snx29 protein_coding retained_intron MGP_BALBcJ_T0043149.1 MGP_BALBcJ_G0022491.1 mouse_genomes_project 16 8008918 8222126 + Snx29 protein_coding retained_intron MGP_BALBcJ_T0003639.1 MGP_BALBcJ_G0003295.1 mouse_genomes_project 16 13717269 13718344 + Gm15648 antisense antisense MGP_BALBcJ_T0043778.1 MGP_BALBcJ_G0022627.1 mouse_genomes_project 16 18478121 18509053 - MGP_BALBcJ_P0043778 Ehhadh protein_coding protein_coding MGP_BALBcJ_T0043880.1 MGP_BALBcJ_G0022660.1 mouse_genomes_project 16 23154265 23169391 - MGP_BALBcJ_P0043880 Cldn1 protein_coding protein_coding MGP_BALBcJ_T0100783.1 MGP_BALBcJ_G0038819.1 mouse_genomes_project 16 19885242 19885367 + Gm24201 snoRNA snoRNA MGP_BALBcJ_T0044974.1 MGP_BALBcJ_G0022989.1 mouse_genomes_project 16 86616816 86617578 - MGP_BALBcJ_P0044974 Krtap6-2 protein_coding protein_coding MGP_BALBcJ_T0043617.1 MGP_BALBcJ_G0022596.1 mouse_genomes_project 16 16190972 16244409 - MGP_BALBcJ_P0043617 protein_coding protein_coding MGP_BALBcJ_T0000972.1 MGP_BALBcJ_G0000901.1 mouse_genomes_project 16 93044012 93044905 + TEC TEC MGP_BALBcJ_T0043846.1 MGP_BALBcJ_G0022647.1 mouse_genomes_project 16 19921979 19933110 + MGP_BALBcJ_P0043846 Adipoq protein_coding protein_coding MGP_BALBcJ_T0043847.1 MGP_BALBcJ_G0022647.1 mouse_genomes_project 16 19922089 19932374 + MGP_BALBcJ_P0043847 Adipoq protein_coding protein_coding MGP_BALBcJ_T0006848.1 MGP_BALBcJ_G0005641.1 mouse_genomes_project 16 73072917 73081874 + Gm15555 lincRNA lincRNA MGP_BALBcJ_T0042916.1 MGP_BALBcJ_G0022431.1 mouse_genomes_project 16 1023189 1038259 - MGP_BALBcJ_P0042916 Tfap4 protein_coding protein_coding MGP_BALBcJ_T0044968.1 MGP_BALBcJ_G0022983.1 mouse_genomes_project 16 86356013 86356478 + MGP_BALBcJ_P0044968 Gm10061 protein_coding protein_coding MGP_BALBcJ_T0044739.1 MGP_BALBcJ_G0022882.1 mouse_genomes_project 16 55859826 55865052 + MGP_BALBcJ_P0044739 Olfr183 protein_coding protein_coding MGP_BALBcJ_T0044740.1 MGP_BALBcJ_G0022882.1 mouse_genomes_project 16 55859845 55864588 + MGP_BALBcJ_P0044740 Olfr183 protein_coding protein_coding MGP_BALBcJ_T0102275.1 MGP_BALBcJ_G0040091.1 mouse_genomes_project 16 90874231 90877025 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045354.1 MGP_BALBcJ_G0023069.1 mouse_genomes_project 16 95378123 95378186 - MGP_BALBcJ_P0045354 Gm21836 protein_coding protein_coding MGP_BALBcJ_T0044669.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53525432 53552550 - MGP_BALBcJ_P0044669 Tfg protein_coding protein_coding MGP_BALBcJ_T0044670.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53525977 53540795 - MGP_BALBcJ_P0044670 Tfg protein_coding protein_coding MGP_BALBcJ_T0044671.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53526068 53539564 - MGP_BALBcJ_P0044671 Tfg protein_coding protein_coding MGP_BALBcJ_T0044672.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53538596 53552411 - MGP_BALBcJ_P0044672 Tfg protein_coding protein_coding MGP_BALBcJ_T0044673.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53539549 53548076 - MGP_BALBcJ_P0044673 Tfg protein_coding protein_coding MGP_BALBcJ_T0044674.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53539631 53552460 - MGP_BALBcJ_P0044674 Tfg protein_coding protein_coding MGP_BALBcJ_T0044675.1 MGP_BALBcJ_G0022857.1 mouse_genomes_project 16 53540711 53552282 - MGP_BALBcJ_P0044675 Tfg protein_coding protein_coding MGP_BALBcJ_T0043600.1 MGP_BALBcJ_G0022588.1 mouse_genomes_project 16 15486051 15490882 - MGP_BALBcJ_P0043600 Mrpl40 protein_coding protein_coding MGP_BALBcJ_T0043601.1 MGP_BALBcJ_G0022588.1 mouse_genomes_project 16 15486259 15490654 - MGP_BALBcJ_P0043601 Mrpl40 protein_coding protein_coding MGP_BALBcJ_T0099514.1 MGP_BALBcJ_G0037550.1 mouse_genomes_project 16 18949392 18949500 + Gm25810 snRNA snRNA MGP_BALBcJ_T0100792.1 MGP_BALBcJ_G0038828.1 mouse_genomes_project 16 32192326 32192529 + Gm25079 snoRNA snoRNA MGP_BALBcJ_T0045353.1 MGP_BALBcJ_G0023068.1 mouse_genomes_project 16 95378120 95378354 - MGP_BALBcJ_P0045353 Gm6020 protein_coding protein_coding MGP_BALBcJ_T0043646.1 MGP_BALBcJ_G0022606.1 mouse_genomes_project 16 16930683 16944999 - protein_coding processed_transcript MGP_BALBcJ_T0043647.1 MGP_BALBcJ_G0022606.1 mouse_genomes_project 16 16930683 16945056 - MGP_BALBcJ_P0043647 protein_coding protein_coding MGP_BALBcJ_T0043648.1 MGP_BALBcJ_G0022606.1 mouse_genomes_project 16 16931966 16936507 - protein_coding processed_transcript MGP_BALBcJ_T0043649.1 MGP_BALBcJ_G0022606.1 mouse_genomes_project 16 16932072 16939047 - MGP_BALBcJ_P0043649 protein_coding protein_coding MGP_BALBcJ_T0043650.1 MGP_BALBcJ_G0022606.1 mouse_genomes_project 16 16937316 16938348 - protein_coding processed_transcript MGP_BALBcJ_T0013092.1 MGP_BALBcJ_G0011189.1 mouse_genomes_project 16 7742634 7745179 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099527.1 MGP_BALBcJ_G0037563.1 mouse_genomes_project 16 33131778 33131883 + Gm23306 snRNA snRNA MGP_BALBcJ_T0043598.1 MGP_BALBcJ_G0022587.1 mouse_genomes_project 16 15445100 15575722 + MGP_BALBcJ_P0043598 Gm28539 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043755.1 MGP_BALBcJ_G0022622.1 mouse_genomes_project 16 17367146 17376404 + MGP_BALBcJ_P0043755 Chrd protein_coding protein_coding MGP_BALBcJ_T0043756.1 MGP_BALBcJ_G0022622.1 mouse_genomes_project 16 17367146 17372172 + MGP_BALBcJ_P0043756 Chrd protein_coding protein_coding MGP_BALBcJ_T0043757.1 MGP_BALBcJ_G0022622.1 mouse_genomes_project 16 17367146 17376404 + MGP_BALBcJ_P0043757 Chrd protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043758.1 MGP_BALBcJ_G0022622.1 mouse_genomes_project 16 17370225 17376402 + Chrd protein_coding retained_intron MGP_BALBcJ_T0010134.1 MGP_BALBcJ_G0008259.1 mouse_genomes_project 16 71039675 71039773 + Gm24272 miRNA miRNA MGP_BALBcJ_T0044308.1 MGP_BALBcJ_G0022766.1 mouse_genomes_project 16 34301424 34331420 - MGP_BALBcJ_P0044308 Gtf2e1 protein_coding protein_coding MGP_BALBcJ_T0044309.1 MGP_BALBcJ_G0022766.1 mouse_genomes_project 16 34324150 34331407 - Gtf2e1 protein_coding retained_intron MGP_BALBcJ_T0044574.1 MGP_BALBcJ_G0022831.1 mouse_genomes_project 16 45129791 45143132 + MGP_BALBcJ_P0044574 Dppa2 protein_coding protein_coding MGP_BALBcJ_T0045202.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645146 91744287 + MGP_BALBcJ_P0045202 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045203.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645267 91717528 + MGP_BALBcJ_P0045203 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045204.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645271 91678191 + Ttc3 protein_coding retained_intron MGP_BALBcJ_T0045205.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645271 91709206 + MGP_BALBcJ_P0045205 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045206.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645274 91717533 + MGP_BALBcJ_P0045206 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045207.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645277 91693528 + MGP_BALBcJ_P0045207 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045208.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645278 91670753 + MGP_BALBcJ_P0045208 Ttc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045209.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645279 91691195 + Ttc3 protein_coding processed_transcript MGP_BALBcJ_T0045210.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645279 91693456 + MGP_BALBcJ_P0045210 Ttc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045211.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645279 91697131 + MGP_BALBcJ_P0045211 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045212.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645285 91717540 + MGP_BALBcJ_P0045212 Ttc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045213.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645295 91684095 + Ttc3 protein_coding processed_transcript MGP_BALBcJ_T0045214.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645295 91661783 + MGP_BALBcJ_P0045214 Ttc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045215.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645295 91664677 + MGP_BALBcJ_P0045215 Ttc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045216.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645295 91717530 + MGP_BALBcJ_P0045216 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045217.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645308 91690793 + MGP_BALBcJ_P0045217 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045218.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645309 91717540 + MGP_BALBcJ_P0045218 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045219.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645309 91717540 + MGP_BALBcJ_P0045219 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045220.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645324 91702700 + MGP_BALBcJ_P0045220 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045221.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645325 91685680 + MGP_BALBcJ_P0045221 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045222.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645325 91677727 + MGP_BALBcJ_P0045222 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045223.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645326 91686944 + Ttc3 protein_coding processed_transcript MGP_BALBcJ_T0045224.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645326 91670997 + MGP_BALBcJ_P0045224 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045225.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91645351 91695115 + MGP_BALBcJ_P0045225 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045226.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91699982 91708015 + MGP_BALBcJ_P0045226 Ttc3 protein_coding protein_coding MGP_BALBcJ_T0045227.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91714953 91723606 + Ttc3 protein_coding retained_intron MGP_BALBcJ_T0045228.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91725987 91734939 + MGP_BALBcJ_P0045228 Ttc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045229.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91732258 91743059 + Ttc3 protein_coding retained_intron MGP_BALBcJ_T0045230.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91740225 91743950 + Ttc3 protein_coding retained_intron MGP_BALBcJ_T0045231.1 MGP_BALBcJ_G0023041.1 mouse_genomes_project 16 91741586 91743282 + Ttc3 protein_coding retained_intron MGP_BALBcJ_T0045042.1 MGP_BALBcJ_G0023005.1 mouse_genomes_project 16 88378558 88381785 - MGP_BALBcJ_P0045042 Gm9881 protein_coding protein_coding MGP_BALBcJ_T0044959.1 MGP_BALBcJ_G0022976.1 mouse_genomes_project 16 86207069 86207840 + MGP_BALBcJ_P0044959 Gm10229 protein_coding protein_coding MGP_BALBcJ_T0043678.1 MGP_BALBcJ_G0022611.1 mouse_genomes_project 16 17187054 17200263 + MGP_BALBcJ_P0043678 Abcf3 protein_coding protein_coding MGP_BALBcJ_T0043679.1 MGP_BALBcJ_G0022611.1 mouse_genomes_project 16 17188145 17190550 + Abcf3 protein_coding retained_intron MGP_BALBcJ_T0043680.1 MGP_BALBcJ_G0022611.1 mouse_genomes_project 16 17189054 17197754 + Abcf3 protein_coding retained_intron MGP_BALBcJ_T0043681.1 MGP_BALBcJ_G0022611.1 mouse_genomes_project 16 17198224 17199154 + Abcf3 protein_coding retained_intron MGP_BALBcJ_T0043682.1 MGP_BALBcJ_G0022611.1 mouse_genomes_project 16 17198537 17199702 + Abcf3 protein_coding retained_intron MGP_BALBcJ_T0044761.1 MGP_BALBcJ_G0022899.1 mouse_genomes_project 16 56340435 56394260 + MGP_BALBcJ_P0044761 Gabrr3 protein_coding protein_coding MGP_BALBcJ_T0000962.1 MGP_BALBcJ_G0000891.1 mouse_genomes_project 16 74571182 74574704 + TEC TEC MGP_BALBcJ_T0045051.1 MGP_BALBcJ_G0023010.1 mouse_genomes_project 16 88614463 88641727 + MGP_BALBcJ_P0045051 Il10rb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045052.1 MGP_BALBcJ_G0023010.1 mouse_genomes_project 16 88614534 88641739 + MGP_BALBcJ_P0045052 Il10rb protein_coding protein_coding MGP_BALBcJ_T0045053.1 MGP_BALBcJ_G0023010.1 mouse_genomes_project 16 88614619 88636221 + Il10rb protein_coding retained_intron MGP_BALBcJ_T0045054.1 MGP_BALBcJ_G0023010.1 mouse_genomes_project 16 88614619 88640830 + MGP_BALBcJ_P0045054 Il10rb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045055.1 MGP_BALBcJ_G0023010.1 mouse_genomes_project 16 88614743 88630427 + Il10rb protein_coding processed_transcript MGP_BALBcJ_T0102273.1 MGP_BALBcJ_G0040089.1 mouse_genomes_project 16 55918451 55919369 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0043859.1 MGP_BALBcJ_G0022653.1 mouse_genomes_project 16 20670121 20671385 - MGP_BALBcJ_P0043859 Sst protein_coding protein_coding MGP_BALBcJ_T0013085.1 MGP_BALBcJ_G0011182.1 mouse_genomes_project 16 794665 794990 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003647.1 MGP_BALBcJ_G0003302.1 mouse_genomes_project 16 29441672 29444647 - Tnk2os antisense antisense MGP_BALBcJ_T0044947.1 MGP_BALBcJ_G0022966.1 mouse_genomes_project 16 86010924 86020197 + MGP_BALBcJ_P0044947 Krtap15 protein_coding protein_coding MGP_BALBcJ_T0044949.1 MGP_BALBcJ_G0022966.1 mouse_genomes_project 16 86019706 86020557 + MGP_BALBcJ_P0044949 Krtap15 protein_coding protein_coding MGP_BALBcJ_T0099518.1 MGP_BALBcJ_G0037554.1 mouse_genomes_project 16 22500741 22500848 - Gm24928 snRNA snRNA MGP_BALBcJ_T0044187.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32348979 32456556 + Sema5b protein_coding retained_intron MGP_BALBcJ_T0044188.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32349196 32473337 + MGP_BALBcJ_P0044188 Sema5b protein_coding protein_coding MGP_BALBcJ_T0044189.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32349405 32473337 + MGP_BALBcJ_P0044189 Sema5b protein_coding protein_coding MGP_BALBcJ_T0044190.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32466461 32466854 + Sema5b protein_coding retained_intron MGP_BALBcJ_T0044191.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32466951 32473808 + MGP_BALBcJ_P0044191 Sema5b protein_coding protein_coding MGP_BALBcJ_T0044192.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32467801 32468647 + Sema5b protein_coding retained_intron MGP_BALBcJ_T0044193.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32470380 32472390 + MGP_BALBcJ_P0044193 Sema5b protein_coding protein_coding MGP_BALBcJ_T0044194.1 MGP_BALBcJ_G0022736.1 mouse_genomes_project 16 32471546 32472530 + Sema5b protein_coding retained_intron MGP_BALBcJ_T0100776.1 MGP_BALBcJ_G0038812.1 mouse_genomes_project 16 5000126 5000208 - Gm23706 snoRNA snoRNA MGP_BALBcJ_T0045318.1 MGP_BALBcJ_G0023055.1 mouse_genomes_project 16 93666051 93724354 + MGP_BALBcJ_P0045318 Igsf5 protein_coding protein_coding MGP_BALBcJ_T0045319.1 MGP_BALBcJ_G0023055.1 mouse_genomes_project 16 93666177 93708925 + MGP_BALBcJ_P0045319 Igsf5 protein_coding protein_coding MGP_BALBcJ_T0045320.1 MGP_BALBcJ_G0023055.1 mouse_genomes_project 16 93666177 93708928 + MGP_BALBcJ_P0045320 Igsf5 protein_coding protein_coding MGP_BALBcJ_T0045321.1 MGP_BALBcJ_G0023055.1 mouse_genomes_project 16 93666177 93831472 + MGP_BALBcJ_P0045321 Igsf5 protein_coding protein_coding MGP_BALBcJ_T0045322.1 MGP_BALBcJ_G0023055.1 mouse_genomes_project 16 93691019 93708225 + Igsf5 protein_coding processed_transcript MGP_BALBcJ_T0045323.1 MGP_BALBcJ_G0023055.1 mouse_genomes_project 16 93701299 93724187 + MGP_BALBcJ_P0045323 Igsf5 protein_coding protein_coding MGP_BALBcJ_T0043663.1 MGP_BALBcJ_G0022608.1 mouse_genomes_project 16 17130820 17142403 + MGP_BALBcJ_P0043663 Eif2b5 protein_coding protein_coding MGP_BALBcJ_T0043664.1 MGP_BALBcJ_G0022608.1 mouse_genomes_project 16 17138845 17141771 + MGP_BALBcJ_P0043664 Eif2b5 protein_coding protein_coding MGP_BALBcJ_T0042973.1 MGP_BALBcJ_G0022446.1 mouse_genomes_project 16 1474200 1485211 - MGP_BALBcJ_P0042973 Sept12 protein_coding protein_coding MGP_BALBcJ_T0044032.1 MGP_BALBcJ_G0022698.1 mouse_genomes_project 16 28964320 28965084 + MGP_BALBcJ_P0044032 Bex6 protein_coding protein_coding MGP_BALBcJ_T0010115.1 MGP_BALBcJ_G0008240.1 mouse_genomes_project 16 29041669 29041803 - Mir1946a miRNA miRNA MGP_BALBcJ_T0044186.1 MGP_BALBcJ_G0022735.1 mouse_genomes_project 16 32210383 32299756 - MGP_BALBcJ_P0044186 Pdia5 protein_coding protein_coding MGP_BALBcJ_T0044038.1 MGP_BALBcJ_G0022701.1 mouse_genomes_project 16 29047081 29050402 + MGP_BALBcJ_P0044038 Smco1 protein_coding protein_coding MGP_BALBcJ_T0010096.1 MGP_BALBcJ_G0008221.1 mouse_genomes_project 16 10713082 10713148 - Gm27671 miRNA miRNA MGP_BALBcJ_T0100804.1 MGP_BALBcJ_G0038840.1 mouse_genomes_project 16 51452250 51452375 + Gm23180 snoRNA snoRNA MGP_BALBcJ_T0045331.1 MGP_BALBcJ_G0023060.1 mouse_genomes_project 16 94763281 94780694 - MGP_BALBcJ_P0045331 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045332.1 MGP_BALBcJ_G0023060.1 mouse_genomes_project 16 94763283 94780693 - MGP_BALBcJ_P0045332 protein_coding protein_coding MGP_BALBcJ_T0100807.1 MGP_BALBcJ_G0038843.1 mouse_genomes_project 16 55553478 55553607 - Gm26019 snoRNA snoRNA MGP_BALBcJ_T0100816.1 MGP_BALBcJ_G0038852.1 mouse_genomes_project 16 77228896 77229012 + Gm23083 snoRNA snoRNA MGP_BALBcJ_T0101644.1 MGP_BALBcJ_G0039647.1 mouse_genomes_project 16 73889022 73911916 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101645.1 MGP_BALBcJ_G0039647.1 mouse_genomes_project 16 73890810 73891179 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0099507.1 MGP_BALBcJ_G0037543.1 mouse_genomes_project 16 13567445 13567540 - Gm22558 snRNA snRNA MGP_BALBcJ_T0013089.1 MGP_BALBcJ_G0011186.1 mouse_genomes_project 16 6573586 6574352 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043277.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13317782 13391666 - MGP_BALBcJ_P0043277 Spag6l protein_coding protein_coding MGP_BALBcJ_T0043278.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13331595 13391673 - Spag6l protein_coding retained_intron MGP_BALBcJ_T0043279.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13353485 13391634 - Spag6l protein_coding processed_transcript MGP_BALBcJ_T0043280.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13353519 13391697 - Spag6l protein_coding processed_transcript MGP_BALBcJ_T0043281.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13383516 13391809 - Spag6l protein_coding processed_transcript MGP_BALBcJ_T0043282.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13383788 13391666 - Spag6l protein_coding processed_transcript MGP_BALBcJ_T0043283.1 MGP_BALBcJ_G0022526.1 mouse_genomes_project 16 13387227 13391660 - Spag6l protein_coding processed_transcript MGP_BALBcJ_T0044748.1 MGP_BALBcJ_G0022886.1 mouse_genomes_project 16 55994911 56005886 - MGP_BALBcJ_P0044748 protein_coding protein_coding MGP_BALBcJ_T0013108.1 MGP_BALBcJ_G0011205.1 mouse_genomes_project 16 15635193 15635841 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006830.1 MGP_BALBcJ_G0005629.1 mouse_genomes_project 16 40192890 40202569 - Gm15713 lincRNA lincRNA MGP_BALBcJ_T0042955.1 MGP_BALBcJ_G0022439.1 mouse_genomes_project 16 1245150 1269734 - MGP_BALBcJ_P0042955 Cdip1 protein_coding protein_coding MGP_BALBcJ_T0042956.1 MGP_BALBcJ_G0022439.1 mouse_genomes_project 16 1246530 1251202 - Cdip1 protein_coding retained_intron MGP_BALBcJ_T0042957.1 MGP_BALBcJ_G0022439.1 mouse_genomes_project 16 1246530 1270036 - MGP_BALBcJ_P0042957 Cdip1 protein_coding protein_coding MGP_BALBcJ_T0042958.1 MGP_BALBcJ_G0022439.1 mouse_genomes_project 16 1247028 1269674 - MGP_BALBcJ_P0042958 Cdip1 protein_coding protein_coding MGP_BALBcJ_T0042959.1 MGP_BALBcJ_G0022439.1 mouse_genomes_project 16 1248998 1270010 - Cdip1 protein_coding retained_intron MGP_BALBcJ_T0043544.1 MGP_BALBcJ_G0022576.1 mouse_genomes_project 16 15004550 15011476 - MGP_BALBcJ_P0043544 Comt protein_coding protein_coding MGP_BALBcJ_T0043545.1 MGP_BALBcJ_G0022576.1 mouse_genomes_project 16 15005467 15025019 - MGP_BALBcJ_P0043545 Comt protein_coding protein_coding MGP_BALBcJ_T0043546.1 MGP_BALBcJ_G0022576.1 mouse_genomes_project 16 15005525 15024552 - MGP_BALBcJ_P0043546 Comt protein_coding protein_coding MGP_BALBcJ_T0043547.1 MGP_BALBcJ_G0022576.1 mouse_genomes_project 16 15008744 15011476 - MGP_BALBcJ_P0043547 Comt protein_coding protein_coding MGP_BALBcJ_T0044638.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52849798 52863821 - MGP_BALBcJ_P0044638 Pcnp protein_coding protein_coding MGP_BALBcJ_T0044639.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52849808 52863851 - MGP_BALBcJ_P0044639 Pcnp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044640.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52851099 52863841 - Pcnp protein_coding processed_transcript MGP_BALBcJ_T0044641.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52851298 52863831 - MGP_BALBcJ_P0044641 Pcnp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044642.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52851331 52863861 - Pcnp protein_coding processed_transcript MGP_BALBcJ_T0044643.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52851490 52858823 - MGP_BALBcJ_P0044643 Pcnp protein_coding protein_coding MGP_BALBcJ_T0044644.1 MGP_BALBcJ_G0022852.1 mouse_genomes_project 16 52852430 52863851 - MGP_BALBcJ_P0044644 Pcnp protein_coding protein_coding MGP_BALBcJ_T0043974.1 MGP_BALBcJ_G0022687.1 mouse_genomes_project 16 28200741 28236330 + MGP_BALBcJ_P0043974 Bdh1 protein_coding protein_coding MGP_BALBcJ_T0043975.1 MGP_BALBcJ_G0022687.1 mouse_genomes_project 16 28207158 28237740 + MGP_BALBcJ_P0043975 Bdh1 protein_coding protein_coding MGP_BALBcJ_T0043976.1 MGP_BALBcJ_G0022687.1 mouse_genomes_project 16 28207162 28216480 + Bdh1 protein_coding retained_intron MGP_BALBcJ_T0043977.1 MGP_BALBcJ_G0022687.1 mouse_genomes_project 16 28207709 28236057 + MGP_BALBcJ_P0043977 Bdh1 protein_coding protein_coding MGP_BALBcJ_T0043978.1 MGP_BALBcJ_G0022687.1 mouse_genomes_project 16 28214202 28235585 + MGP_BALBcJ_P0043978 Bdh1 protein_coding protein_coding MGP_BALBcJ_T0043979.1 MGP_BALBcJ_G0022687.1 mouse_genomes_project 16 28236954 28237740 + Bdh1 protein_coding processed_transcript MGP_BALBcJ_T0043884.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23381414 23523961 + MGP_BALBcJ_P0043884 Il1rap protein_coding protein_coding MGP_BALBcJ_T0043885.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23381452 23523050 + MGP_BALBcJ_P0043885 Il1rap protein_coding protein_coding MGP_BALBcJ_T0043886.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23381463 23497752 + MGP_BALBcJ_P0043886 Il1rap protein_coding protein_coding MGP_BALBcJ_T0043887.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23381467 23516441 + MGP_BALBcJ_P0043887 Il1rap protein_coding protein_coding MGP_BALBcJ_T0043888.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23423772 23513765 + MGP_BALBcJ_P0043888 Il1rap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043889.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23521130 23528814 + MGP_BALBcJ_P0043889 Il1rap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043890.1 MGP_BALBcJ_G0022663.1 mouse_genomes_project 16 23525738 23526925 + Il1rap protein_coding processed_transcript MGP_BALBcJ_T0043097.1 MGP_BALBcJ_G0022481.1 mouse_genomes_project 16 7336781 7337342 - MGP_BALBcJ_P0043097 Prm1 protein_coding protein_coding MGP_BALBcJ_T0102267.1 MGP_BALBcJ_G0040083.1 mouse_genomes_project 16 13237003 13237124 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0044506.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41940890 41960240 - MGP_BALBcJ_P0044506 Slc35a5 protein_coding protein_coding MGP_BALBcJ_T0044507.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41943264 41960100 - MGP_BALBcJ_P0044507 Slc35a5 protein_coding protein_coding MGP_BALBcJ_T0044508.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41945332 41953240 - Slc35a5 protein_coding retained_intron MGP_BALBcJ_T0044509.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41945475 41960178 - MGP_BALBcJ_P0044509 Slc35a5 protein_coding protein_coding MGP_BALBcJ_T0044510.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41945495 41959717 - MGP_BALBcJ_P0044510 Slc35a5 protein_coding protein_coding MGP_BALBcJ_T0044511.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41953880 41960189 - Slc35a5 protein_coding retained_intron MGP_BALBcJ_T0044512.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41953923 41959987 - MGP_BALBcJ_P0044512 Slc35a5 protein_coding protein_coding MGP_BALBcJ_T0044513.1 MGP_BALBcJ_G0022814.1 mouse_genomes_project 16 41956009 41960134 - Slc35a5 protein_coding retained_intron MGP_BALBcJ_T0044534.1 MGP_BALBcJ_G0022820.1 mouse_genomes_project 16 42430344 42441690 + MGP_BALBcJ_P0044534 Gcsam protein_coding protein_coding MGP_BALBcJ_T0044535.1 MGP_BALBcJ_G0022820.1 mouse_genomes_project 16 42430387 42443319 + MGP_BALBcJ_P0044535 Gcsam protein_coding protein_coding MGP_BALBcJ_T0006826.1 MGP_BALBcJ_G0005625.1 mouse_genomes_project 16 32312056 32318302 - 1600019K03Rik lincRNA lincRNA MGP_BALBcJ_T0003631.1 MGP_BALBcJ_G0003288.1 mouse_genomes_project 16 7209326 7223515 - Gm15558 antisense antisense MGP_BALBcJ_T0010132.1 MGP_BALBcJ_G0008257.1 mouse_genomes_project 16 59774282 59774350 + Gm25986 miRNA miRNA MGP_BALBcJ_T0000949.1 MGP_BALBcJ_G0000879.1 mouse_genomes_project 16 36929888 36929931 + TEC TEC MGP_BALBcJ_T0013109.1 MGP_BALBcJ_G0011206.1 mouse_genomes_project 16 15646439 15646862 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045349.1 MGP_BALBcJ_G0023066.1 mouse_genomes_project 16 95261503 95276721 - MGP_BALBcJ_P0045349 Zbtb21 protein_coding protein_coding MGP_BALBcJ_T0045350.1 MGP_BALBcJ_G0023066.1 mouse_genomes_project 16 95261503 95276721 - MGP_BALBcJ_P0045350 Zbtb21 protein_coding protein_coding MGP_BALBcJ_T0045351.1 MGP_BALBcJ_G0023066.1 mouse_genomes_project 16 95261503 95276721 - MGP_BALBcJ_P0045351 Zbtb21 protein_coding protein_coding MGP_BALBcJ_T0045314.1 MGP_BALBcJ_G0023054.1 mouse_genomes_project 16 93535823 93622683 + MGP_BALBcJ_P0045314 B3galt5 protein_coding protein_coding MGP_BALBcJ_T0045315.1 MGP_BALBcJ_G0023054.1 mouse_genomes_project 16 93570961 93616598 + B3galt5 protein_coding processed_transcript MGP_BALBcJ_T0045316.1 MGP_BALBcJ_G0023054.1 mouse_genomes_project 16 93571098 93616599 + B3galt5 protein_coding processed_transcript MGP_BALBcJ_T0045317.1 MGP_BALBcJ_G0023054.1 mouse_genomes_project 16 93578285 93622681 + MGP_BALBcJ_P0045317 B3galt5 protein_coding protein_coding MGP_BALBcJ_T0017486.1 MGP_BALBcJ_G0015265.1 mouse_genomes_project 16 88254998 88267020 + 4931406G06Rik processed_transcript processed_transcript MGP_BALBcJ_T0045151.1 MGP_BALBcJ_G0023027.1 mouse_genomes_project 16 89626179 89699651 - MGP_BALBcJ_P0045151 Rcan1 protein_coding protein_coding MGP_BALBcJ_T0045152.1 MGP_BALBcJ_G0023027.1 mouse_genomes_project 16 89626179 89634300 - MGP_BALBcJ_P0045152 Rcan1 protein_coding protein_coding MGP_BALBcJ_T0045009.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88035436 88038315 + Eva1c protein_coding processed_transcript MGP_BALBcJ_T0045010.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88035436 88114523 + MGP_BALBcJ_P0045010 Eva1c protein_coding protein_coding MGP_BALBcJ_T0045011.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88039514 88114937 + MGP_BALBcJ_P0045011 Eva1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045012.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88039573 88114481 + MGP_BALBcJ_P0045012 Eva1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045013.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88039819 88114523 + MGP_BALBcJ_P0045013 Eva1c protein_coding protein_coding MGP_BALBcJ_T0045014.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88039819 88114523 + MGP_BALBcJ_P0045014 Eva1c protein_coding protein_coding MGP_BALBcJ_T0045015.1 MGP_BALBcJ_G0023000.1 mouse_genomes_project 16 88055100 88100027 + MGP_BALBcJ_P0045015 Eva1c protein_coding protein_coding MGP_BALBcJ_T0098851.1 MGP_BALBcJ_G0036900.1 mouse_genomes_project 16 27754484 27758729 - Gm15742 sense_intronic sense_intronic MGP_BALBcJ_T0043076.1 MGP_BALBcJ_G0022474.1 mouse_genomes_project 16 7017959 7065662 + MGP_BALBcJ_P0043076 Ciita protein_coding unknown_likely_coding MGP_BALBcJ_T0043077.1 MGP_BALBcJ_G0022474.1 mouse_genomes_project 16 7026699 7067984 + MGP_BALBcJ_P0043077 Ciita protein_coding protein_coding MGP_BALBcJ_T0100788.1 MGP_BALBcJ_G0038824.1 mouse_genomes_project 16 27673727 27673862 + Gm25375 snoRNA snoRNA MGP_BALBcJ_T0044004.1 MGP_BALBcJ_G0022693.1 mouse_genomes_project 16 28743430 28784735 - MGP_BALBcJ_P0044004 Senp5 protein_coding protein_coding MGP_BALBcJ_T0044005.1 MGP_BALBcJ_G0022693.1 mouse_genomes_project 16 28744442 28770036 - MGP_BALBcJ_P0044005 Senp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044006.1 MGP_BALBcJ_G0022693.1 mouse_genomes_project 16 28756650 28771212 - MGP_BALBcJ_P0044006 Senp5 protein_coding protein_coding MGP_BALBcJ_T0044007.1 MGP_BALBcJ_G0022693.1 mouse_genomes_project 16 28757788 28784626 - Senp5 protein_coding retained_intron MGP_BALBcJ_T0045173.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91102682 91146634 + MGP_BALBcJ_P0045173 Morc3 protein_coding protein_coding MGP_BALBcJ_T0045174.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91102682 91146631 + MGP_BALBcJ_P0045174 Morc3 protein_coding protein_coding MGP_BALBcJ_T0045175.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91102796 91115223 + Morc3 protein_coding retained_intron MGP_BALBcJ_T0045176.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91102818 91145589 + MGP_BALBcJ_P0045176 Morc3 protein_coding protein_coding MGP_BALBcJ_T0045177.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91102824 91131095 + MGP_BALBcJ_P0045177 Morc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045178.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91115105 91119706 + Morc3 protein_coding processed_transcript MGP_BALBcJ_T0045179.1 MGP_BALBcJ_G0023034.1 mouse_genomes_project 16 91124329 91126479 + Morc3 protein_coding retained_intron MGP_BALBcJ_T0044960.1 MGP_BALBcJ_G0022977.1 mouse_genomes_project 16 86225048 86225642 + MGP_BALBcJ_P0044960 Krtap6-1 protein_coding protein_coding MGP_BALBcJ_T0100784.1 MGP_BALBcJ_G0038820.1 mouse_genomes_project 16 19885616 19885794 + Snora81 snoRNA snoRNA MGP_BALBcJ_T0006832.1 MGP_BALBcJ_G0005631.1 mouse_genomes_project 16 46025593 46071339 - 1700026J12Rik lincRNA lincRNA MGP_BALBcJ_T0006833.1 MGP_BALBcJ_G0005631.1 mouse_genomes_project 16 46025620 46071339 - 1700026J12Rik lincRNA lincRNA MGP_BALBcJ_T0045335.1 MGP_BALBcJ_G0023062.1 mouse_genomes_project 16 94883699 94931566 - MGP_BALBcJ_P0045335 Tmprss2 protein_coding protein_coding MGP_BALBcJ_T0044946.1 MGP_BALBcJ_G0022965.1 mouse_genomes_project 16 86009376 86016532 - MGP_BALBcJ_P0044946 Krtap14 protein_coding protein_coding MGP_BALBcJ_T0044948.1 MGP_BALBcJ_G0022965.1 mouse_genomes_project 16 86015999 86016855 - MGP_BALBcJ_P0044948 Krtap14 protein_coding protein_coding MGP_BALBcJ_T0042922.1 MGP_BALBcJ_G0022433.1 mouse_genomes_project 16 1096621 1097146 - Gm9803 protein_coding retained_intron MGP_BALBcJ_T0042923.1 MGP_BALBcJ_G0022433.1 mouse_genomes_project 16 1096621 1105172 - MGP_BALBcJ_P0042923 Gm9803 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042924.1 MGP_BALBcJ_G0022433.1 mouse_genomes_project 16 1096621 1105224 - MGP_BALBcJ_P0042924 Gm9803 protein_coding protein_coding MGP_BALBcJ_T0042925.1 MGP_BALBcJ_G0022433.1 mouse_genomes_project 16 1096759 1098312 - Gm9803 protein_coding retained_intron MGP_BALBcJ_T0044203.1 MGP_BALBcJ_G0022741.1 mouse_genomes_project 16 32751790 32781030 + MGP_BALBcJ_P0044203 Parp9 protein_coding protein_coding MGP_BALBcJ_T0044204.1 MGP_BALBcJ_G0022741.1 mouse_genomes_project 16 32751808 32756907 + Parp9 protein_coding retained_intron MGP_BALBcJ_T0044205.1 MGP_BALBcJ_G0022741.1 mouse_genomes_project 16 32751839 32760777 + MGP_BALBcJ_P0044205 Parp9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044206.1 MGP_BALBcJ_G0022741.1 mouse_genomes_project 16 32754135 32761012 + Parp9 protein_coding processed_transcript MGP_BALBcJ_T0044207.1 MGP_BALBcJ_G0022741.1 mouse_genomes_project 16 32754223 32785033 + MGP_BALBcJ_P0044207 Parp9 protein_coding protein_coding MGP_BALBcJ_T0044208.1 MGP_BALBcJ_G0022741.1 mouse_genomes_project 16 32761374 32769930 + MGP_BALBcJ_P0044208 Parp9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042974.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494469 1495488 + MGP_BALBcJ_P0042974 Smim22 protein_coding protein_coding MGP_BALBcJ_T0042975.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494497 1495224 + Smim22 protein_coding retained_intron MGP_BALBcJ_T0042976.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494518 1495491 + MGP_BALBcJ_P0042976 Smim22 protein_coding protein_coding MGP_BALBcJ_T0042977.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494533 1495491 + Smim22 protein_coding processed_transcript MGP_BALBcJ_T0042978.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494533 1495491 + MGP_BALBcJ_P0042978 Smim22 protein_coding protein_coding MGP_BALBcJ_T0042979.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494533 1495488 + MGP_BALBcJ_P0042979 Smim22 protein_coding protein_coding MGP_BALBcJ_T0042980.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494540 1495491 + Smim22 protein_coding processed_transcript MGP_BALBcJ_T0042981.1 MGP_BALBcJ_G0022447.1 mouse_genomes_project 16 1494949 1495491 + Smim22 protein_coding retained_intron MGP_BALBcJ_T0044152.1 MGP_BALBcJ_G0022727.1 mouse_genomes_project 16 30761624 30773911 - MGP_BALBcJ_P0044152 Umps protein_coding protein_coding MGP_BALBcJ_T0044153.1 MGP_BALBcJ_G0022727.1 mouse_genomes_project 16 30761636 30773876 - MGP_BALBcJ_P0044153 Umps protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043792.1 MGP_BALBcJ_G0022633.1 mouse_genomes_project 16 18955799 18956591 + MGP_BALBcJ_P0043792 protein_coding protein_coding MGP_BALBcJ_T0100802.1 MGP_BALBcJ_G0038838.1 mouse_genomes_project 16 50224616 50224724 - Gm22459 snoRNA snoRNA MGP_BALBcJ_T0100821.1 MGP_BALBcJ_G0038857.1 mouse_genomes_project 16 84707493 84707629 - Gm24891 snoRNA snoRNA MGP_BALBcJ_T0043994.1 MGP_BALBcJ_G0022689.1 mouse_genomes_project 16 28659260 28679466 + MGP_BALBcJ_P0043994 Mfi2 protein_coding protein_coding MGP_BALBcJ_T0044201.1 MGP_BALBcJ_G0022740.1 mouse_genomes_project 16 32739392 32751930 - MGP_BALBcJ_P0044201 Dtx3l protein_coding protein_coding MGP_BALBcJ_T0044202.1 MGP_BALBcJ_G0022740.1 mouse_genomes_project 16 32744650 32751930 - MGP_BALBcJ_P0044202 Dtx3l protein_coding protein_coding MGP_BALBcJ_T0045074.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88867965 88900349 + MGP_BALBcJ_P0045074 Son protein_coding protein_coding MGP_BALBcJ_T0045075.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88868338 88900337 + MGP_BALBcJ_P0045075 Son protein_coding protein_coding MGP_BALBcJ_T0045076.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88868338 88900337 + MGP_BALBcJ_P0045076 Son protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045077.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88868338 88886191 + MGP_BALBcJ_P0045077 Son protein_coding protein_coding MGP_BALBcJ_T0045078.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88868339 88884516 + MGP_BALBcJ_P0045078 Son protein_coding protein_coding MGP_BALBcJ_T0045079.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88868344 88900363 + MGP_BALBcJ_P0045079 Son protein_coding protein_coding MGP_BALBcJ_T0045080.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88880441 88900334 + MGP_BALBcJ_P0045080 Son protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045081.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88884702 88893279 + Son protein_coding processed_transcript MGP_BALBcJ_T0045082.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88892487 88893848 + Son protein_coding processed_transcript MGP_BALBcJ_T0045083.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88894578 88898754 + Son protein_coding processed_transcript MGP_BALBcJ_T0045084.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88894808 88899262 + Son protein_coding processed_transcript MGP_BALBcJ_T0045085.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88895244 88899643 + Son protein_coding processed_transcript MGP_BALBcJ_T0045086.1 MGP_BALBcJ_G0023016.1 mouse_genomes_project 16 88896069 88898576 + Son protein_coding retained_intron MGP_BALBcJ_T0013170.1 MGP_BALBcJ_G0011267.1 mouse_genomes_project 16 80506588 80507071 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044119.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29838754 29842487 + MGP_BALBcJ_P0044119 Rpl35a protein_coding protein_coding MGP_BALBcJ_T0044120.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29838767 29842474 + MGP_BALBcJ_P0044120 Rpl35a protein_coding protein_coding MGP_BALBcJ_T0044121.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29838783 29842473 + Rpl35a protein_coding retained_intron MGP_BALBcJ_T0044122.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29838825 29839832 + Rpl35a protein_coding retained_intron MGP_BALBcJ_T0044123.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29838828 29842463 + MGP_BALBcJ_P0044123 Rpl35a protein_coding protein_coding MGP_BALBcJ_T0044124.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29839107 29842473 + MGP_BALBcJ_P0044124 Rpl35a protein_coding protein_coding MGP_BALBcJ_T0044125.1 MGP_BALBcJ_G0022718.1 mouse_genomes_project 16 29839319 29842454 + MGP_BALBcJ_P0044125 Rpl35a protein_coding protein_coding MGP_BALBcJ_T0043227.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10942090 11063178 + MGP_BALBcJ_P0043227 Abcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043228.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10942090 11063178 + MGP_BALBcJ_P0043228 Abcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043229.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10942090 11063178 + MGP_BALBcJ_P0043229 Abcc1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043230.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10942092 11065013 + MGP_BALBcJ_P0043230 Abcc1 protein_coding protein_coding MGP_BALBcJ_T0043231.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10942108 10981809 + MGP_BALBcJ_P0043231 Abcc1 protein_coding protein_coding MGP_BALBcJ_T0043232.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10942113 10990498 + MGP_BALBcJ_P0043232 Abcc1 protein_coding protein_coding MGP_BALBcJ_T0043233.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10946759 10976848 + MGP_BALBcJ_P0043233 Abcc1 protein_coding protein_coding MGP_BALBcJ_T0043234.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10979357 10979732 + Abcc1 protein_coding processed_transcript MGP_BALBcJ_T0043235.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 10987775 11006464 + Abcc1 protein_coding retained_intron MGP_BALBcJ_T0043236.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 11046793 11057573 + Abcc1 protein_coding retained_intron MGP_BALBcJ_T0043237.1 MGP_BALBcJ_G0022511.1 mouse_genomes_project 16 11046798 11063318 + Abcc1 protein_coding retained_intron MGP_BALBcJ_T0003633.1 MGP_BALBcJ_G0003290.1 mouse_genomes_project 16 9944739 9965142 - antisense antisense MGP_BALBcJ_T0003634.1 MGP_BALBcJ_G0003290.1 mouse_genomes_project 16 9957367 9965138 - antisense antisense MGP_BALBcJ_T0044945.1 MGP_BALBcJ_G0022964.1 mouse_genomes_project 16 85972486 85973119 + MGP_BALBcJ_P0044945 Gm5965 protein_coding protein_coding MGP_BALBcJ_T0044416.1 MGP_BALBcJ_G0022794.1 mouse_genomes_project 16 40438600 40454352 - MGP_BALBcJ_P0044416 Tigit protein_coding protein_coding MGP_BALBcJ_T0043781.1 MGP_BALBcJ_G0022630.1 mouse_genomes_project 16 18670856 18717949 - MGP_BALBcJ_P0043781 Liph protein_coding protein_coding MGP_BALBcJ_T0043782.1 MGP_BALBcJ_G0022630.1 mouse_genomes_project 16 18670856 18717949 - MGP_BALBcJ_P0043782 Liph protein_coding protein_coding MGP_BALBcJ_T0043115.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7690063 7730238 - MGP_BALBcJ_P0043115 Zc3h7a protein_coding protein_coding MGP_BALBcJ_T0043116.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7690597 7694361 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043117.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7692514 7695377 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043118.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7694184 7702579 - MGP_BALBcJ_P0043118 Zc3h7a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043119.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7694278 7730186 - MGP_BALBcJ_P0043119 Zc3h7a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043120.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7699236 7730195 - MGP_BALBcJ_P0043120 Zc3h7a protein_coding unknown_likely_coding MGP_BALBcJ_T0043121.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7699278 7729945 - MGP_BALBcJ_P0043121 Zc3h7a protein_coding protein_coding MGP_BALBcJ_T0043122.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7699464 7701429 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043123.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7701430 7705476 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043124.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7702581 7728822 - MGP_BALBcJ_P0043124 Zc3h7a protein_coding protein_coding MGP_BALBcJ_T0043125.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7704349 7705280 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043126.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7705341 7706806 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043127.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7705734 7710131 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043128.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7707072 7712681 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043129.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7708248 7712703 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0043130.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7710582 7728789 - MGP_BALBcJ_P0043130 Zc3h7a protein_coding protein_coding MGP_BALBcJ_T0043131.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7714987 7729410 - MGP_BALBcJ_P0043131 Zc3h7a protein_coding protein_coding MGP_BALBcJ_T0043132.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7714997 7729909 - MGP_BALBcJ_P0043132 Zc3h7a protein_coding protein_coding MGP_BALBcJ_T0043133.1 MGP_BALBcJ_G0022487.1 mouse_genomes_project 16 7717410 7730187 - Zc3h7a protein_coding retained_intron MGP_BALBcJ_T0042944.1 MGP_BALBcJ_G0022437.1 mouse_genomes_project 16 1193257 1202308 - MGP_BALBcJ_P0042944 Nmral1 protein_coding protein_coding MGP_BALBcJ_T0042945.1 MGP_BALBcJ_G0022437.1 mouse_genomes_project 16 1194515 1202355 - MGP_BALBcJ_P0042945 Nmral1 protein_coding protein_coding MGP_BALBcJ_T0042946.1 MGP_BALBcJ_G0022437.1 mouse_genomes_project 16 1194515 1202555 - MGP_BALBcJ_P0042946 Nmral1 protein_coding protein_coding MGP_BALBcJ_T0042947.1 MGP_BALBcJ_G0022437.1 mouse_genomes_project 16 1195493 1202311 - MGP_BALBcJ_P0042947 Nmral1 protein_coding protein_coding MGP_BALBcJ_T0042948.1 MGP_BALBcJ_G0022437.1 mouse_genomes_project 16 1197707 1202287 - Nmral1 protein_coding retained_intron MGP_BALBcJ_T0042949.1 MGP_BALBcJ_G0022437.1 mouse_genomes_project 16 1199023 1202303 - Nmral1 protein_coding retained_intron MGP_BALBcJ_T0043760.1 MGP_BALBcJ_G0022624.1 mouse_genomes_project 16 17908931 17927471 + MGP_BALBcJ_P0043760 Ephb3 protein_coding protein_coding MGP_BALBcJ_T0043761.1 MGP_BALBcJ_G0022624.1 mouse_genomes_project 16 17915271 17927138 + MGP_BALBcJ_P0043761 Ephb3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043762.1 MGP_BALBcJ_G0022624.1 mouse_genomes_project 16 17920987 17927472 + Ephb3 protein_coding retained_intron MGP_BALBcJ_T0043763.1 MGP_BALBcJ_G0022624.1 mouse_genomes_project 16 17925856 17926858 + Ephb3 protein_coding retained_intron MGP_BALBcJ_T0099504.1 MGP_BALBcJ_G0037540.1 mouse_genomes_project 16 6772626 6772729 + Gm24392 snRNA snRNA MGP_BALBcJ_T0100803.1 MGP_BALBcJ_G0038839.1 mouse_genomes_project 16 51181526 51181658 + Gm25853 snoRNA snoRNA MGP_BALBcJ_T0043964.1 MGP_BALBcJ_G0022684.1 mouse_genomes_project 16 27873681 27984507 - MGP_BALBcJ_P0043964 Acap2 protein_coding protein_coding MGP_BALBcJ_T0043965.1 MGP_BALBcJ_G0022684.1 mouse_genomes_project 16 27882998 27984260 - MGP_BALBcJ_P0043965 Acap2 protein_coding unknown_likely_coding MGP_BALBcJ_T0044587.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45810833 45836417 + MGP_BALBcJ_P0044587 C330027C09Rik protein_coding protein_coding MGP_BALBcJ_T0044588.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45810836 45836417 + MGP_BALBcJ_P0044588 C330027C09Rik protein_coding protein_coding MGP_BALBcJ_T0044589.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45810871 45817796 + MGP_BALBcJ_P0044589 C330027C09Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044590.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45817574 45818768 + C330027C09Rik protein_coding retained_intron MGP_BALBcJ_T0044591.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45825124 45836363 + C330027C09Rik protein_coding retained_intron MGP_BALBcJ_T0044592.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45827143 45830004 + C330027C09Rik protein_coding retained_intron MGP_BALBcJ_T0044593.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45830008 45831063 + C330027C09Rik protein_coding retained_intron MGP_BALBcJ_T0044594.1 MGP_BALBcJ_G0022838.1 mouse_genomes_project 16 45832550 45836421 + C330027C09Rik protein_coding retained_intron MGP_BALBcJ_T0013093.1 MGP_BALBcJ_G0011190.1 mouse_genomes_project 16 7743919 7750452 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0042836.1 MGP_BALBcJ_G0022414.1 mouse_genomes_project 16 146131 157041 - MGP_BALBcJ_P0042836 Mefv protein_coding protein_coding MGP_BALBcJ_T0042837.1 MGP_BALBcJ_G0022414.1 mouse_genomes_project 16 146131 157041 - MGP_BALBcJ_P0042837 Mefv protein_coding protein_coding MGP_BALBcJ_T0010127.1 MGP_BALBcJ_G0008252.1 mouse_genomes_project 16 50692516 50692581 + Gm25041 miRNA miRNA MGP_BALBcJ_T0000120.1 MGP_BALBcJ_G0000091.1 mouse_genomes_project 16 15695946 15696430 - MGP_BALBcJ_P0000120 Iglv1 IG_V_gene IG_V_gene MGP_BALBcJ_T0044887.1 MGP_BALBcJ_G0022940.1 mouse_genomes_project 16 81983220 82009903 + MGP_BALBcJ_P0044887 Gabpa protein_coding protein_coding MGP_BALBcJ_T0044888.1 MGP_BALBcJ_G0022940.1 mouse_genomes_project 16 81983419 82012317 + MGP_BALBcJ_P0044888 Gabpa protein_coding protein_coding MGP_BALBcJ_T0044889.1 MGP_BALBcJ_G0022940.1 mouse_genomes_project 16 82001129 82009017 + Gabpa protein_coding processed_transcript MGP_BALBcJ_T0044890.1 MGP_BALBcJ_G0022940.1 mouse_genomes_project 16 82004624 82006163 + Gabpa protein_coding retained_intron MGP_BALBcJ_T0044891.1 MGP_BALBcJ_G0022940.1 mouse_genomes_project 16 82008632 82011054 + Gabpa protein_coding processed_transcript MGP_BALBcJ_T0043101.1 MGP_BALBcJ_G0022484.1 mouse_genomes_project 16 7502786 7537904 - MGP_BALBcJ_P0043101 Litaf protein_coding protein_coding MGP_BALBcJ_T0043102.1 MGP_BALBcJ_G0022484.1 mouse_genomes_project 16 7504335 7519502 - MGP_BALBcJ_P0043102 Litaf protein_coding protein_coding MGP_BALBcJ_T0043103.1 MGP_BALBcJ_G0022484.1 mouse_genomes_project 16 7506854 7612511 - MGP_BALBcJ_P0043103 Litaf protein_coding protein_coding MGP_BALBcJ_T0043104.1 MGP_BALBcJ_G0022484.1 mouse_genomes_project 16 7509813 7537854 - Litaf protein_coding retained_intron MGP_BALBcJ_T0044815.1 MGP_BALBcJ_G0022918.1 mouse_genomes_project 16 66913941 66923712 - MGP_BALBcJ_P0044815 Speer2 protein_coding protein_coding MGP_BALBcJ_T0013091.1 MGP_BALBcJ_G0011188.1 mouse_genomes_project 16 7341824 7342320 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013130.1 MGP_BALBcJ_G0011227.1 mouse_genomes_project 16 32733551 32733824 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011389.1 MGP_BALBcJ_G0009514.1 mouse_genomes_project 16 38097113 38097276 - Gm27587 misc_RNA misc_RNA MGP_BALBcJ_T0045149.1 MGP_BALBcJ_G0023026.1 mouse_genomes_project 16 89579063 89592661 - MGP_BALBcJ_P0045149 Kcne1 protein_coding protein_coding MGP_BALBcJ_T0045150.1 MGP_BALBcJ_G0023026.1 mouse_genomes_project 16 89581622 89592067 - MGP_BALBcJ_P0045150 Kcne1 protein_coding protein_coding MGP_BALBcJ_T0013174.1 MGP_BALBcJ_G0011271.1 mouse_genomes_project 16 88757793 88758672 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013136.1 MGP_BALBcJ_G0011233.1 mouse_genomes_project 16 35558262 35559843 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010122.1 MGP_BALBcJ_G0008247.1 mouse_genomes_project 16 40429845 40429928 + Mir568 miRNA miRNA MGP_BALBcJ_T0044310.1 MGP_BALBcJ_G0022767.1 mouse_genomes_project 16 34331515 34364292 + MGP_BALBcJ_P0044310 Rabl3 protein_coding protein_coding MGP_BALBcJ_T0044311.1 MGP_BALBcJ_G0022767.1 mouse_genomes_project 16 34331530 34364289 + MGP_BALBcJ_P0044311 Rabl3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044312.1 MGP_BALBcJ_G0022767.1 mouse_genomes_project 16 34331535 34355955 + Rabl3 protein_coding retained_intron MGP_BALBcJ_T0044313.1 MGP_BALBcJ_G0022767.1 mouse_genomes_project 16 34355640 34359848 + Rabl3 protein_coding retained_intron MGP_BALBcJ_T0099506.1 MGP_BALBcJ_G0037542.1 mouse_genomes_project 16 7720945 7721108 - Gm24145 snRNA snRNA MGP_BALBcJ_T0100795.1 MGP_BALBcJ_G0038831.1 mouse_genomes_project 16 34964527 34964660 + Gm25617 snoRNA snoRNA MGP_BALBcJ_T0044926.1 MGP_BALBcJ_G0022951.1 mouse_genomes_project 16 84887104 84922213 + MGP_BALBcJ_P0044926 Bach1 protein_coding protein_coding MGP_BALBcJ_T0044927.1 MGP_BALBcJ_G0022951.1 mouse_genomes_project 16 84887124 84921480 + Bach1 protein_coding processed_transcript MGP_BALBcJ_T0044928.1 MGP_BALBcJ_G0022951.1 mouse_genomes_project 16 84887163 84911146 + Bach1 protein_coding retained_intron MGP_BALBcJ_T0101642.1 MGP_BALBcJ_G0039646.1 mouse_genomes_project 16 46255402 46255773 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101643.1 MGP_BALBcJ_G0039646.1 mouse_genomes_project 16 46255527 46256536 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0043349.1 MGP_BALBcJ_G0022537.1 mouse_genomes_project 16 13716652 13768692 - MGP_BALBcJ_P0043349 Ube2l3 protein_coding protein_coding MGP_BALBcJ_T0043350.1 MGP_BALBcJ_G0022537.1 mouse_genomes_project 16 13716654 13767535 - MGP_BALBcJ_P0043350 Ube2l3 protein_coding protein_coding MGP_BALBcJ_T0043351.1 MGP_BALBcJ_G0022537.1 mouse_genomes_project 16 13716957 13724787 - Ube2l3 protein_coding processed_transcript MGP_BALBcJ_T0043352.1 MGP_BALBcJ_G0022537.1 mouse_genomes_project 16 13717949 13767537 - MGP_BALBcJ_P0043352 Ube2l3 protein_coding protein_coding MGP_BALBcJ_T0043353.1 MGP_BALBcJ_G0022537.1 mouse_genomes_project 16 13722008 13767516 - Ube2l3 protein_coding retained_intron MGP_BALBcJ_T0003679.1 MGP_BALBcJ_G0003325.1 mouse_genomes_project 16 89848514 89855707 + Gm26626 antisense antisense MGP_BALBcJ_T0045043.1 MGP_BALBcJ_G0023006.1 mouse_genomes_project 16 88436447 88439575 + MGP_BALBcJ_P0045043 Olig2 protein_coding protein_coding MGP_BALBcJ_T0003661.1 MGP_BALBcJ_G0003312.1 mouse_genomes_project 16 35385939 35389917 - Gm17103 antisense antisense MGP_BALBcJ_T0003663.1 MGP_BALBcJ_G0003314.1 mouse_genomes_project 16 38206124 38228222 - Gm28750 antisense antisense MGP_BALBcJ_T0100814.1 MGP_BALBcJ_G0038850.1 mouse_genomes_project 16 73208862 73208993 - Gm22268 snoRNA snoRNA MGP_BALBcJ_T0045306.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93500283 93528398 + MGP_BALBcJ_P0045306 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045307.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93500484 93528393 + MGP_BALBcJ_P0045307 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045308.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93500484 93524149 + MGP_BALBcJ_P0045308 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045309.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93500517 93519689 + MGP_BALBcJ_P0045309 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045310.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93500542 93524180 + MGP_BALBcJ_P0045310 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045311.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93504820 93519689 + MGP_BALBcJ_P0045311 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045312.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93505744 93524152 + MGP_BALBcJ_P0045312 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0045313.1 MGP_BALBcJ_G0023053.1 mouse_genomes_project 16 93519596 93528390 + MGP_BALBcJ_P0045313 Sh3bgr protein_coding protein_coding MGP_BALBcJ_T0000043.1 MGP_BALBcJ_G0000035.1 mouse_genomes_project 16 15818854 15818896 - MGP_BALBcJ_P0000043 Iglj4 IG_J_gene IG_J_gene MGP_BALBcJ_T0043937.1 MGP_BALBcJ_G0022679.1 mouse_genomes_project 16 27084554 27161133 - MGP_BALBcJ_P0043937 Atp13a3 protein_coding protein_coding MGP_BALBcJ_T0043938.1 MGP_BALBcJ_G0022679.1 mouse_genomes_project 16 27084554 27161133 - MGP_BALBcJ_P0043938 Atp13a3 protein_coding protein_coding MGP_BALBcJ_T0043939.1 MGP_BALBcJ_G0022679.1 mouse_genomes_project 16 27126901 27129976 - Atp13a3 protein_coding retained_intron MGP_BALBcJ_T0043940.1 MGP_BALBcJ_G0022679.1 mouse_genomes_project 16 27134600 27161088 - Atp13a3 protein_coding retained_intron MGP_BALBcJ_T0043941.1 MGP_BALBcJ_G0022679.1 mouse_genomes_project 16 27158490 27161440 - Atp13a3 protein_coding retained_intron MGP_BALBcJ_T0044700.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55270882 55327925 - MGP_BALBcJ_P0044700 St3gal6 protein_coding protein_coding MGP_BALBcJ_T0044701.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55272510 55328742 - MGP_BALBcJ_P0044701 St3gal6 protein_coding protein_coding MGP_BALBcJ_T0044702.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55272969 55328684 - MGP_BALBcJ_P0044702 St3gal6 protein_coding protein_coding MGP_BALBcJ_T0044703.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55278611 55328052 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044704.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55289173 55292179 - St3gal6 protein_coding retained_intron MGP_BALBcJ_T0044705.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55291672 55327943 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044706.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55291685 55328668 - MGP_BALBcJ_P0044706 St3gal6 protein_coding protein_coding MGP_BALBcJ_T0044707.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55296444 55328668 - MGP_BALBcJ_P0044707 St3gal6 protein_coding protein_coding MGP_BALBcJ_T0044708.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55296496 55302200 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044709.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55296498 55327843 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044710.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55296507 55328633 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044711.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55296507 55328223 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044712.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55305719 55328257 - St3gal6 protein_coding processed_transcript MGP_BALBcJ_T0044713.1 MGP_BALBcJ_G0022869.1 mouse_genomes_project 16 55305719 55311428 - St3gal6 protein_coding retained_intron MGP_BALBcJ_T0045328.1 MGP_BALBcJ_G0023057.1 mouse_genomes_project 16 93772667 93831685 + MGP_BALBcJ_P0045328 Pcp4 protein_coding protein_coding MGP_BALBcJ_T0013151.1 MGP_BALBcJ_G0011248.1 mouse_genomes_project 16 46112066 46113214 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044692.1 MGP_BALBcJ_G0022867.1 mouse_genomes_project 16 54460233 54591385 - MGP_BALBcJ_P0044692 Col8a1 protein_coding protein_coding MGP_BALBcJ_T0003677.1 MGP_BALBcJ_G0003323.1 mouse_genomes_project 16 89147348 89151546 + Gm15976 antisense antisense MGP_BALBcJ_T0099508.1 MGP_BALBcJ_G0037544.1 mouse_genomes_project 16 13772421 13772528 - Gm22129 snRNA snRNA MGP_BALBcJ_T0017484.1 MGP_BALBcJ_G0015264.1 mouse_genomes_project 16 88221227 88226482 + 4930404I05Rik processed_transcript processed_transcript MGP_BALBcJ_T0017485.1 MGP_BALBcJ_G0015264.1 mouse_genomes_project 16 88223699 88226722 + 4930404I05Rik processed_transcript processed_transcript MGP_BALBcJ_T0045169.1 MGP_BALBcJ_G0023031.1 mouse_genomes_project 16 90874102 90877299 + MGP_BALBcJ_P0045169 Cbr1 protein_coding protein_coding MGP_BALBcJ_T0013175.1 MGP_BALBcJ_G0011272.1 mouse_genomes_project 16 91897273 91897484 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044788.1 MGP_BALBcJ_G0022906.1 mouse_genomes_project 16 59781184 59790856 + MGP_BALBcJ_P0044788 Stx19 protein_coding protein_coding MGP_BALBcJ_T0044033.1 MGP_BALBcJ_G0022699.1 mouse_genomes_project 16 29003600 29021249 - MGP_BALBcJ_P0044033 Fbxo45 protein_coding protein_coding MGP_BALBcJ_T0013134.1 MGP_BALBcJ_G0011231.1 mouse_genomes_project 16 35328931 35330663 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044952.1 MGP_BALBcJ_G0022969.1 mouse_genomes_project 16 86068615 86069141 - MGP_BALBcJ_P0044952 Krtap19-3 protein_coding protein_coding MGP_BALBcJ_T0044714.1 MGP_BALBcJ_G0022870.1 mouse_genomes_project 16 55423337 55426631 - MGP_BALBcJ_P0044714 Gm813 protein_coding protein_coding MGP_BALBcJ_T0006818.1 MGP_BALBcJ_G0005617.1 mouse_genomes_project 16 21190534 21192511 - Lppos lincRNA lincRNA MGP_BALBcJ_T0010099.1 MGP_BALBcJ_G0008224.1 mouse_genomes_project 16 13690546 13690643 - Mir301b miRNA miRNA MGP_BALBcJ_T0006827.1 MGP_BALBcJ_G0005626.1 mouse_genomes_project 16 32617864 32620861 - Gm26838 lincRNA lincRNA MGP_BALBcJ_T0045180.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91154654 91176900 + MGP_BALBcJ_P0045180 Chaf1b protein_coding protein_coding MGP_BALBcJ_T0045181.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91154677 91176862 + MGP_BALBcJ_P0045181 Chaf1b protein_coding protein_coding MGP_BALBcJ_T0045182.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91154684 91165040 + Chaf1b protein_coding retained_intron MGP_BALBcJ_T0045183.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91154769 91156225 + MGP_BALBcJ_P0045183 Chaf1b protein_coding protein_coding MGP_BALBcJ_T0045184.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91154955 91157906 + MGP_BALBcJ_P0045184 Chaf1b protein_coding protein_coding MGP_BALBcJ_T0045185.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91157463 91163541 + Chaf1b protein_coding processed_transcript MGP_BALBcJ_T0045186.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91163492 91170914 + Chaf1b protein_coding retained_intron MGP_BALBcJ_T0045187.1 MGP_BALBcJ_G0023035.1 mouse_genomes_project 16 91175477 91176895 + Chaf1b protein_coding retained_intron MGP_BALBcJ_T0044008.1 MGP_BALBcJ_G0022694.1 mouse_genomes_project 16 28797671 28860870 - MGP_BALBcJ_P0044008 Pak2 protein_coding protein_coding MGP_BALBcJ_T0010119.1 MGP_BALBcJ_G0008244.1 mouse_genomes_project 16 37170024 37170126 - Gm27887 miRNA miRNA MGP_BALBcJ_T0045045.1 MGP_BALBcJ_G0023008.1 mouse_genomes_project 16 88577167 88612722 + MGP_BALBcJ_P0045045 Ifnar2 protein_coding protein_coding MGP_BALBcJ_T0045046.1 MGP_BALBcJ_G0023008.1 mouse_genomes_project 16 88577210 88601792 + MGP_BALBcJ_P0045046 Ifnar2 protein_coding protein_coding MGP_BALBcJ_T0045047.1 MGP_BALBcJ_G0023008.1 mouse_genomes_project 16 88577219 88601969 + MGP_BALBcJ_P0045047 Ifnar2 protein_coding protein_coding MGP_BALBcJ_T0045048.1 MGP_BALBcJ_G0023008.1 mouse_genomes_project 16 88595717 88599705 + MGP_BALBcJ_P0045048 Ifnar2 protein_coding protein_coding MGP_BALBcJ_T0013160.1 MGP_BALBcJ_G0011257.1 mouse_genomes_project 16 58051497 58051756 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013097.1 MGP_BALBcJ_G0011194.1 mouse_genomes_project 16 10626770 10627772 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043324.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13651476 13676914 - MGP_BALBcJ_P0043324 Ppil2 protein_coding protein_coding MGP_BALBcJ_T0043325.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13651476 13676919 - MGP_BALBcJ_P0043325 Ppil2 protein_coding protein_coding MGP_BALBcJ_T0043326.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13652237 13676904 - MGP_BALBcJ_P0043326 Ppil2 protein_coding protein_coding MGP_BALBcJ_T0043327.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13653527 13654381 - Ppil2 protein_coding retained_intron MGP_BALBcJ_T0043328.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13655023 13656439 - Ppil2 protein_coding retained_intron MGP_BALBcJ_T0043329.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13657768 13668549 - Ppil2 protein_coding retained_intron MGP_BALBcJ_T0043330.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13659842 13662066 - Ppil2 protein_coding retained_intron MGP_BALBcJ_T0043331.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13660682 13676877 - MGP_BALBcJ_P0043331 Ppil2 protein_coding protein_coding MGP_BALBcJ_T0043332.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13661625 13676898 - Ppil2 protein_coding processed_transcript MGP_BALBcJ_T0043333.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13661930 13676875 - Ppil2 protein_coding retained_intron MGP_BALBcJ_T0043334.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13672880 13676898 - Ppil2 protein_coding processed_transcript MGP_BALBcJ_T0043335.1 MGP_BALBcJ_G0022532.1 mouse_genomes_project 16 13674511 13676894 - Ppil2 protein_coding retained_intron MGP_BALBcJ_T0043743.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17336282 17349436 - MGP_BALBcJ_P0043743 Clcn2 protein_coding protein_coding MGP_BALBcJ_T0043744.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17336306 17349433 - Clcn2 protein_coding retained_intron MGP_BALBcJ_T0043745.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17336316 17349483 - Clcn2 protein_coding retained_intron MGP_BALBcJ_T0043746.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17336541 17349430 - MGP_BALBcJ_P0043746 Clcn2 protein_coding protein_coding MGP_BALBcJ_T0043747.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17338856 17351067 - MGP_BALBcJ_P0043747 Clcn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043748.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17340492 17342445 - Clcn2 protein_coding retained_intron MGP_BALBcJ_T0043749.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17341024 17342053 - Clcn2 protein_coding retained_intron MGP_BALBcJ_T0043750.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17343409 17345284 - Clcn2 protein_coding retained_intron MGP_BALBcJ_T0043751.1 MGP_BALBcJ_G0022619.1 mouse_genomes_project 16 17345629 17346987 - Clcn2 protein_coding retained_intron MGP_BALBcJ_T0044387.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 36782672 37776549 + MGP_BALBcJ_P0044387 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044388.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 36782682 38956300 + MGP_BALBcJ_P0044388 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044389.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 36782697 38202511 + MGP_BALBcJ_P0044389 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044390.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 36782697 38008627 + MGP_BALBcJ_P0044390 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044391.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 36782906 37464471 + Lsamp protein_coding processed_transcript MGP_BALBcJ_T0044392.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 38321870 38925764 + MGP_BALBcJ_P0044392 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044393.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 38322049 38961701 + MGP_BALBcJ_P0044393 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044394.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 38322431 38328253 + MGP_BALBcJ_P0044394 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044395.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 38923536 38954463 + MGP_BALBcJ_P0044395 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044396.1 MGP_BALBcJ_G0022791.1 mouse_genomes_project 16 38923577 38954288 + MGP_BALBcJ_P0044396 Lsamp protein_coding protein_coding MGP_BALBcJ_T0044935.1 MGP_BALBcJ_G0022954.1 mouse_genomes_project 16 85750641 85752997 - MGP_BALBcJ_P0044935 Cldn8 protein_coding protein_coding MGP_BALBcJ_T0044834.1 MGP_BALBcJ_G0022922.1 mouse_genomes_project 16 72630215 72672581 - MGP_BALBcJ_P0044834 Lipi protein_coding protein_coding MGP_BALBcJ_T0044835.1 MGP_BALBcJ_G0022922.1 mouse_genomes_project 16 72630245 72656645 - Lipi protein_coding processed_transcript MGP_BALBcJ_T0043635.1 MGP_BALBcJ_G0022604.1 mouse_genomes_project 16 16852194 16860210 - MGP_BALBcJ_P0043635 Map6d1 protein_coding protein_coding MGP_BALBcJ_T0098338.1 MGP_BALBcJ_G0036392.1 mouse_genomes_project 16 86617100 86617544 - pseudogene pseudogene MGP_BALBcJ_T0098334.1 MGP_BALBcJ_G0036388.1 mouse_genomes_project 16 55984849 55985728 - pseudogene pseudogene MGP_BALBcJ_T0043694.1 MGP_BALBcJ_G0022613.1 mouse_genomes_project 16 17237598 17242916 - MGP_BALBcJ_P0043694 Alg3 protein_coding protein_coding MGP_BALBcJ_T0043695.1 MGP_BALBcJ_G0022613.1 mouse_genomes_project 16 17237611 17242886 - MGP_BALBcJ_P0043695 Alg3 protein_coding unknown_likely_coding MGP_BALBcJ_T0043696.1 MGP_BALBcJ_G0022613.1 mouse_genomes_project 16 17237619 17242879 - MGP_BALBcJ_P0043696 Alg3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043697.1 MGP_BALBcJ_G0022613.1 mouse_genomes_project 16 17237620 17242895 - MGP_BALBcJ_P0043697 Alg3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043698.1 MGP_BALBcJ_G0022613.1 mouse_genomes_project 16 17240889 17242900 - Alg3 protein_coding processed_transcript MGP_BALBcJ_T0043213.1 MGP_BALBcJ_G0022506.1 mouse_genomes_project 16 10575645 10689879 + MGP_BALBcJ_P0043213 2900011O08Rik protein_coding protein_coding MGP_BALBcJ_T0043354.1 MGP_BALBcJ_G0022538.1 mouse_genomes_project 16 13774764 13780551 + MGP_BALBcJ_P0043354 Rimbp3 protein_coding protein_coding MGP_BALBcJ_T0043487.1 MGP_BALBcJ_G0022565.1 mouse_genomes_project 16 14572138 14572991 + MGP_BALBcJ_P0043487 protein_coding protein_coding MGP_BALBcJ_T0043739.1 MGP_BALBcJ_G0022618.1 mouse_genomes_project 16 17326600 17332602 + MGP_BALBcJ_P0043739 Fam131a protein_coding protein_coding MGP_BALBcJ_T0043740.1 MGP_BALBcJ_G0022618.1 mouse_genomes_project 16 17326620 17336303 + MGP_BALBcJ_P0043740 Fam131a protein_coding protein_coding MGP_BALBcJ_T0043741.1 MGP_BALBcJ_G0022618.1 mouse_genomes_project 16 17328226 17336367 + MGP_BALBcJ_P0043741 Fam131a protein_coding protein_coding MGP_BALBcJ_T0043742.1 MGP_BALBcJ_G0022618.1 mouse_genomes_project 16 17329493 17334978 + MGP_BALBcJ_P0043742 Fam131a protein_coding protein_coding MGP_BALBcJ_T0045232.1 MGP_BALBcJ_G0023042.1 mouse_genomes_project 16 91773169 91803081 - MGP_BALBcJ_P0045232 Dscr3 protein_coding protein_coding MGP_BALBcJ_T0045233.1 MGP_BALBcJ_G0023042.1 mouse_genomes_project 16 91777782 91786862 - Dscr3 protein_coding processed_transcript MGP_BALBcJ_T0045234.1 MGP_BALBcJ_G0023042.1 mouse_genomes_project 16 91779862 91802683 - Dscr3 protein_coding retained_intron MGP_BALBcJ_T0045235.1 MGP_BALBcJ_G0023042.1 mouse_genomes_project 16 91786134 91802692 - Dscr3 protein_coding retained_intron MGP_BALBcJ_T0045236.1 MGP_BALBcJ_G0023042.1 mouse_genomes_project 16 91787828 91802668 - Dscr3 protein_coding retained_intron MGP_BALBcJ_T0044518.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42212061 42239474 - MGP_BALBcJ_P0044518 Cd200 protein_coding protein_coding MGP_BALBcJ_T0044519.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42212109 42239296 - MGP_BALBcJ_P0044519 Cd200 protein_coding protein_coding MGP_BALBcJ_T0044520.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42213234 42239393 - Cd200 protein_coding processed_transcript MGP_BALBcJ_T0044521.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42222147 42230172 - MGP_BALBcJ_P0044521 Cd200 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044522.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42222147 42239334 - MGP_BALBcJ_P0044522 Cd200 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044523.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42224504 42239444 - Cd200 protein_coding processed_transcript MGP_BALBcJ_T0044524.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42224732 42239462 - Cd200 protein_coding processed_transcript MGP_BALBcJ_T0044525.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42226834 42239438 - Cd200 protein_coding processed_transcript MGP_BALBcJ_T0044526.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42229431 42239285 - Cd200 protein_coding retained_intron MGP_BALBcJ_T0044527.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42230152 42239428 - Cd200 protein_coding processed_transcript MGP_BALBcJ_T0044528.1 MGP_BALBcJ_G0022817.1 mouse_genomes_project 16 42237661 42239439 - Cd200 protein_coding processed_transcript MGP_BALBcJ_T0043966.1 MGP_BALBcJ_G0022685.1 mouse_genomes_project 16 28032276 28054018 - MGP_BALBcJ_P0043966 Ppp1r2 protein_coding protein_coding MGP_BALBcJ_T0043967.1 MGP_BALBcJ_G0022685.1 mouse_genomes_project 16 28037017 28054040 - MGP_BALBcJ_P0043967 Ppp1r2 protein_coding protein_coding MGP_BALBcJ_T0044600.1 MGP_BALBcJ_G0022841.1 mouse_genomes_project 16 46673056 46733466 + MGP_BALBcJ_P0044600 Cd47 protein_coding protein_coding MGP_BALBcJ_T0044601.1 MGP_BALBcJ_G0022841.1 mouse_genomes_project 16 46673225 46733475 + MGP_BALBcJ_P0044601 Cd47 protein_coding unknown_likely_coding MGP_BALBcJ_T0044602.1 MGP_BALBcJ_G0022841.1 mouse_genomes_project 16 46685401 46729178 + MGP_BALBcJ_P0044602 Cd47 protein_coding protein_coding MGP_BALBcJ_T0044772.1 MGP_BALBcJ_G0022902.1 mouse_genomes_project 16 56546573 56573178 - MGP_BALBcJ_P0044772 Arl6 protein_coding protein_coding MGP_BALBcJ_T0044773.1 MGP_BALBcJ_G0022902.1 mouse_genomes_project 16 56546952 56573402 - MGP_BALBcJ_P0044773 Arl6 protein_coding protein_coding MGP_BALBcJ_T0044774.1 MGP_BALBcJ_G0022902.1 mouse_genomes_project 16 56547229 56565956 - MGP_BALBcJ_P0044774 Arl6 protein_coding protein_coding MGP_BALBcJ_T0044775.1 MGP_BALBcJ_G0022902.1 mouse_genomes_project 16 56554806 56573140 - MGP_BALBcJ_P0044775 Arl6 protein_coding protein_coding MGP_BALBcJ_T0013122.1 MGP_BALBcJ_G0011219.1 mouse_genomes_project 16 22526873 22527794 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043951.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27336438 27363878 - MGP_BALBcJ_P0043951 Lsg1 protein_coding protein_coding MGP_BALBcJ_T0043952.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27337315 27363875 - MGP_BALBcJ_P0043952 Lsg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043953.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27340622 27363849 - Lsg1 protein_coding retained_intron MGP_BALBcJ_T0043954.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27340974 27344057 - Lsg1 protein_coding retained_intron MGP_BALBcJ_T0043955.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27343960 27363878 - Lsg1 protein_coding retained_intron MGP_BALBcJ_T0043956.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27347663 27361936 - MGP_BALBcJ_P0043956 Lsg1 protein_coding protein_coding MGP_BALBcJ_T0043957.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27349605 27363860 - Lsg1 protein_coding retained_intron MGP_BALBcJ_T0043958.1 MGP_BALBcJ_G0022681.1 mouse_genomes_project 16 27358542 27363825 - Lsg1 protein_coding retained_intron MGP_BALBcJ_T0013124.1 MGP_BALBcJ_G0011221.1 mouse_genomes_project 16 26063082 26063476 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043616.1 MGP_BALBcJ_G0022595.1 mouse_genomes_project 16 16190969 16244446 - MGP_BALBcJ_P0043616 protein_coding protein_coding MGP_BALBcJ_T0044957.1 MGP_BALBcJ_G0022974.1 mouse_genomes_project 16 86153083 86153684 - MGP_BALBcJ_P0044957 Krtap16-3 protein_coding protein_coding MGP_BALBcJ_T0043160.1 MGP_BALBcJ_G0022495.1 mouse_genomes_project 16 9660741 9704940 + MGP_BALBcJ_P0043160 Ercc4 protein_coding protein_coding MGP_BALBcJ_T0043161.1 MGP_BALBcJ_G0022495.1 mouse_genomes_project 16 9660974 9680981 + Ercc4 protein_coding retained_intron MGP_BALBcJ_T0043162.1 MGP_BALBcJ_G0022495.1 mouse_genomes_project 16 9660992 9684762 + MGP_BALBcJ_P0043162 Ercc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043163.1 MGP_BALBcJ_G0022495.1 mouse_genomes_project 16 9663580 9706823 + MGP_BALBcJ_P0043163 Ercc4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043164.1 MGP_BALBcJ_G0022495.1 mouse_genomes_project 16 9691229 9697117 + Ercc4 protein_coding processed_transcript MGP_BALBcJ_T0043015.1 MGP_BALBcJ_G0022458.1 mouse_genomes_project 16 4923249 4946821 - MGP_BALBcJ_P0043015 Tmem114 protein_coding protein_coding MGP_BALBcJ_T0043062.1 MGP_BALBcJ_G0022470.1 mouse_genomes_project 16 6818858 6851016 - MGP_BALBcJ_P0043062 Emp2 protein_coding protein_coding MGP_BALBcJ_T0045108.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951013 89092666 + MGP_BALBcJ_P0045108 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045109.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951085 89094107 + MGP_BALBcJ_P0045109 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045110.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951085 89143859 + MGP_BALBcJ_P0045110 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045111.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951085 89137256 + MGP_BALBcJ_P0045111 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045112.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951102 89053834 + MGP_BALBcJ_P0045112 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045113.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951103 89094111 + MGP_BALBcJ_P0045113 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045114.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951105 89094109 + MGP_BALBcJ_P0045114 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045115.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951198 89003354 + Itsn1 protein_coding retained_intron MGP_BALBcJ_T0045116.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951303 89014824 + Itsn1 protein_coding retained_intron MGP_BALBcJ_T0045117.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 88951324 89092953 + MGP_BALBcJ_P0045117 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045118.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89003136 89040082 + MGP_BALBcJ_P0045118 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045119.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89005080 89049797 + Itsn1 protein_coding processed_transcript MGP_BALBcJ_T0045120.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89026054 89038376 + Itsn1 protein_coding processed_transcript MGP_BALBcJ_T0045121.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89026068 89033750 + Itsn1 protein_coding retained_intron MGP_BALBcJ_T0045122.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89038284 89049384 + Itsn1 protein_coding processed_transcript MGP_BALBcJ_T0045123.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89049023 89049760 + Itsn1 protein_coding retained_intron MGP_BALBcJ_T0045124.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89061122 89073758 + Itsn1 protein_coding retained_intron MGP_BALBcJ_T0045125.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89061211 89075686 + MGP_BALBcJ_P0045125 Itsn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045126.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89064051 89075686 + MGP_BALBcJ_P0045126 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045127.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89076236 89085756 + MGP_BALBcJ_P0045127 Itsn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045128.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89084451 89093803 + Itsn1 protein_coding retained_intron MGP_BALBcJ_T0045129.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89100083 89116747 + Itsn1 protein_coding processed_transcript MGP_BALBcJ_T0045130.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89110265 89132540 + MGP_BALBcJ_P0045130 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045131.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89122294 89132563 + MGP_BALBcJ_P0045131 Itsn1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045132.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89122296 89132540 + MGP_BALBcJ_P0045132 Itsn1 protein_coding protein_coding MGP_BALBcJ_T0045133.1 MGP_BALBcJ_G0023020.1 mouse_genomes_project 16 89135226 89138428 + Itsn1 protein_coding processed_transcript MGP_BALBcJ_T0003636.1 MGP_BALBcJ_G0003292.1 mouse_genomes_project 16 10899365 10901544 + Gm15868 antisense antisense MGP_BALBcJ_T0043968.1 MGP_BALBcJ_G0022686.1 mouse_genomes_project 16 28074824 28093585 - MGP_BALBcJ_P0043968 Apod protein_coding protein_coding MGP_BALBcJ_T0043969.1 MGP_BALBcJ_G0022686.1 mouse_genomes_project 16 28075680 28093581 - MGP_BALBcJ_P0043969 Apod protein_coding protein_coding MGP_BALBcJ_T0043970.1 MGP_BALBcJ_G0022686.1 mouse_genomes_project 16 28075714 28093371 - Apod protein_coding retained_intron MGP_BALBcJ_T0043971.1 MGP_BALBcJ_G0022686.1 mouse_genomes_project 16 28075976 28082013 - Apod protein_coding retained_intron MGP_BALBcJ_T0043972.1 MGP_BALBcJ_G0022686.1 mouse_genomes_project 16 28076069 28082246 - Apod protein_coding retained_intron MGP_BALBcJ_T0043973.1 MGP_BALBcJ_G0022686.1 mouse_genomes_project 16 28082072 28090125 - Apod protein_coding retained_intron MGP_BALBcJ_T0044936.1 MGP_BALBcJ_G0022955.1 mouse_genomes_project 16 85801593 85803164 - MGP_BALBcJ_P0044936 Krtap24-1 protein_coding protein_coding MGP_BALBcJ_T0043369.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13848166 13976962 - MGP_BALBcJ_P0043369 Pi4ka protein_coding protein_coding MGP_BALBcJ_T0043370.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13848167 13849460 - Pi4ka protein_coding retained_intron MGP_BALBcJ_T0043371.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13848167 13852778 - Pi4ka protein_coding retained_intron MGP_BALBcJ_T0043372.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13848167 13875875 - MGP_BALBcJ_P0043372 Pi4ka protein_coding protein_coding MGP_BALBcJ_T0043373.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13848167 13976541 - MGP_BALBcJ_P0043373 Pi4ka protein_coding protein_coding MGP_BALBcJ_T0043374.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13848168 13849890 - Pi4ka protein_coding retained_intron MGP_BALBcJ_T0043375.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13850636 13851940 - Pi4ka protein_coding retained_intron MGP_BALBcJ_T0043376.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13865351 13875498 - MGP_BALBcJ_P0043376 Pi4ka protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043377.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13875986 13893431 - MGP_BALBcJ_P0043377 Pi4ka protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043378.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13880195 13918789 - MGP_BALBcJ_P0043378 Pi4ka protein_coding protein_coding MGP_BALBcJ_T0043379.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13890913 13918751 - Pi4ka protein_coding retained_intron MGP_BALBcJ_T0043382.1 MGP_BALBcJ_G0022541.1 mouse_genomes_project 16 13932230 13976541 - Pi4ka protein_coding retained_intron MGP_BALBcJ_T0043466.1 MGP_BALBcJ_G0022556.1 mouse_genomes_project 16 14422418 14425507 - MGP_BALBcJ_P0043466 Car15 protein_coding protein_coding MGP_BALBcJ_T0044993.1 MGP_BALBcJ_G0022994.1 mouse_genomes_project 16 87420948 87426529 + MGP_BALBcJ_P0044993 Sod1 protein_coding protein_coding MGP_BALBcJ_T0045049.1 MGP_BALBcJ_G0023009.1 mouse_genomes_project 16 88599649 88635361 + MGP_BALBcJ_P0045049 Gm21970 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045050.1 MGP_BALBcJ_G0023009.1 mouse_genomes_project 16 88599649 88635361 + MGP_BALBcJ_P0045050 Gm21970 protein_coding protein_coding MGP_BALBcJ_T0043309.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13544506 13608575 + MGP_BALBcJ_P0043309 Mapk1 protein_coding protein_coding MGP_BALBcJ_T0043310.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13544506 13605871 + MGP_BALBcJ_P0043310 Mapk1 protein_coding protein_coding MGP_BALBcJ_T0043311.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13544691 13600162 + MGP_BALBcJ_P0043311 Mapk1 protein_coding protein_coding MGP_BALBcJ_T0043312.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13579560 13585203 + Mapk1 protein_coding retained_intron MGP_BALBcJ_T0043313.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13587173 13588342 + Mapk1 protein_coding retained_intron MGP_BALBcJ_T0043314.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13587513 13604985 + MGP_BALBcJ_P0043314 Mapk1 protein_coding protein_coding MGP_BALBcJ_T0043315.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13596459 13599827 + Mapk1 protein_coding processed_transcript MGP_BALBcJ_T0043316.1 MGP_BALBcJ_G0022530.1 mouse_genomes_project 16 13596670 13605332 + Mapk1 protein_coding processed_transcript MGP_BALBcJ_T0045246.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535638 92578988 + MGP_BALBcJ_P0045246 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045247.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535638 92578400 + MGP_BALBcJ_P0045247 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045248.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535638 92578988 + MGP_BALBcJ_P0045248 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045249.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535638 92578988 + MGP_BALBcJ_P0045249 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045250.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535638 92577284 + MGP_BALBcJ_P0045250 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045251.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535731 92579037 + MGP_BALBcJ_P0045251 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045252.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535739 92574816 + MGP_BALBcJ_P0045252 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045253.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535739 92574481 + MGP_BALBcJ_P0045253 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045254.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92535763 92574458 + MGP_BALBcJ_P0045254 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045255.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92536448 92578988 + MGP_BALBcJ_P0045255 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045256.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92536603 92570605 + Kcnj15 protein_coding processed_transcript MGP_BALBcJ_T0045257.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92536664 92578988 + MGP_BALBcJ_P0045257 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0045258.1 MGP_BALBcJ_G0023045.1 mouse_genomes_project 16 92557861 92570668 + MGP_BALBcJ_P0045258 Kcnj15 protein_coding protein_coding MGP_BALBcJ_T0044612.1 MGP_BALBcJ_G0022843.1 mouse_genomes_project 16 47421638 47422934 - MGP_BALBcJ_P0044612 Ccdc54 protein_coding protein_coding MGP_BALBcJ_T0044863.1 MGP_BALBcJ_G0022934.1 mouse_genomes_project 16 76006590 76027470 + MGP_BALBcJ_P0044863 Chodl protein_coding protein_coding MGP_BALBcJ_T0044864.1 MGP_BALBcJ_G0022934.1 mouse_genomes_project 16 76006590 76022900 + MGP_BALBcJ_P0044864 Chodl protein_coding protein_coding MGP_BALBcJ_T0044865.1 MGP_BALBcJ_G0022934.1 mouse_genomes_project 16 76006590 76025641 + MGP_BALBcJ_P0044865 Chodl protein_coding protein_coding MGP_BALBcJ_T0044856.1 MGP_BALBcJ_G0022930.1 mouse_genomes_project 16 75407396 75450534 + MGP_BALBcJ_P0044856 Cxadr protein_coding protein_coding MGP_BALBcJ_T0044857.1 MGP_BALBcJ_G0022930.1 mouse_genomes_project 16 75408018 75463324 + MGP_BALBcJ_P0044857 Cxadr protein_coding protein_coding MGP_BALBcJ_T0010101.1 MGP_BALBcJ_G0008226.1 mouse_genomes_project 16 14877863 14877942 - Mir1306 miRNA miRNA MGP_BALBcJ_T0043182.1 MGP_BALBcJ_G0022501.1 mouse_genomes_project 16 10352247 10387504 + MGP_BALBcJ_P0043182 Rrn3 protein_coding protein_coding MGP_BALBcJ_T0044786.1 MGP_BALBcJ_G0022905.1 mouse_genomes_project 16 59758778 59816594 - MGP_BALBcJ_P0044786 Arl13b protein_coding protein_coding MGP_BALBcJ_T0044787.1 MGP_BALBcJ_G0022905.1 mouse_genomes_project 16 59760445 59768770 - Arl13b protein_coding processed_transcript MGP_BALBcJ_T0044789.1 MGP_BALBcJ_G0022905.1 mouse_genomes_project 16 59792113 59816594 - Arl13b protein_coding retained_intron MGP_BALBcJ_T0044905.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84633582 84640641 + MGP_BALBcJ_P0044905 Usp16 protein_coding protein_coding MGP_BALBcJ_T0044906.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84633606 84661902 + MGP_BALBcJ_P0044906 Usp16 protein_coding protein_coding MGP_BALBcJ_T0044907.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84633624 84640158 + Usp16 protein_coding retained_intron MGP_BALBcJ_T0044908.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84633640 84649615 + Usp16 protein_coding retained_intron MGP_BALBcJ_T0044909.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84633646 84644938 + Usp16 protein_coding processed_transcript MGP_BALBcJ_T0044910.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84633655 84661895 + MGP_BALBcJ_P0044910 Usp16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0044911.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84651444 84658498 + Usp16 protein_coding retained_intron MGP_BALBcJ_T0044912.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84651679 84657792 + Usp16 protein_coding retained_intron MGP_BALBcJ_T0044913.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84660022 84661765 + Usp16 protein_coding retained_intron MGP_BALBcJ_T0044914.1 MGP_BALBcJ_G0022948.1 mouse_genomes_project 16 84661435 84661883 + Usp16 protein_coding retained_intron MGP_BALBcJ_T0044221.1 MGP_BALBcJ_G0022745.1 mouse_genomes_project 16 32885532 32905900 + MGP_BALBcJ_P0044221 Ccdc58 protein_coding protein_coding MGP_BALBcJ_T0044222.1 MGP_BALBcJ_G0022745.1 mouse_genomes_project 16 32885532 32905900 + MGP_BALBcJ_P0044222 Ccdc58 protein_coding protein_coding MGP_BALBcJ_T0044223.1 MGP_BALBcJ_G0022745.1 mouse_genomes_project 16 32895148 32905900 + MGP_BALBcJ_P0044223 Ccdc58 protein_coding protein_coding MGP_BALBcJ_T0102268.1 MGP_BALBcJ_G0040084.1 mouse_genomes_project 16 19751345 19760349 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011392.1 MGP_BALBcJ_G0009517.1 mouse_genomes_project 16 62909552 62909865 + Gm22217 misc_RNA misc_RNA MGP_BALBcJ_T0013168.1 MGP_BALBcJ_G0011265.1 mouse_genomes_project 16 76039818 76040170 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011383.1 MGP_BALBcJ_G0009508.1 mouse_genomes_project 16 4972974 4973263 - Gm25782 misc_RNA misc_RNA MGP_BALBcJ_T0044227.1 MGP_BALBcJ_G0022748.1 mouse_genomes_project 16 33020152 33024028 + MGP_BALBcJ_P0044227 Gm5483 protein_coding protein_coding MGP_BALBcJ_T0010093.1 MGP_BALBcJ_G0008218.1 mouse_genomes_project 16 10013777 10013864 + Mir365-1 miRNA miRNA MGP_BALBcJ_T0043357.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844074 13846477 + MGP_BALBcJ_P0043357 Tmem191c protein_coding protein_coding MGP_BALBcJ_T0043358.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844119 13846477 + MGP_BALBcJ_P0043358 Tmem191c protein_coding protein_coding MGP_BALBcJ_T0043359.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844138 13845296 + Tmem191c protein_coding processed_transcript MGP_BALBcJ_T0043360.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844152 13844907 + Tmem191c protein_coding retained_intron MGP_BALBcJ_T0043361.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844152 13846473 + MGP_BALBcJ_P0043361 Tmem191c protein_coding protein_coding MGP_BALBcJ_T0043362.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844158 13845218 + Tmem191c protein_coding processed_transcript MGP_BALBcJ_T0043363.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844244 13845553 + MGP_BALBcJ_P0043363 Tmem191c protein_coding protein_coding MGP_BALBcJ_T0043364.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844487 13846477 + MGP_BALBcJ_P0043364 Tmem191c protein_coding protein_coding MGP_BALBcJ_T0043365.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844670 13846021 + MGP_BALBcJ_P0043365 Tmem191c protein_coding protein_coding MGP_BALBcJ_T0043366.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844891 13845869 + Tmem191c protein_coding retained_intron MGP_BALBcJ_T0043367.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13844905 13845982 + Tmem191c protein_coding retained_intron MGP_BALBcJ_T0043368.1 MGP_BALBcJ_G0022540.1 mouse_genomes_project 16 13845416 13851044 + Tmem191c protein_coding retained_intron MGP_BALBcJ_T0044176.1 MGP_BALBcJ_G0022730.1 mouse_genomes_project 16 31491795 31526600 + MGP_BALBcJ_P0044176 Ccdc14 protein_coding protein_coding MGP_BALBcJ_T0043615.1 MGP_BALBcJ_G0022594.1 mouse_genomes_project 16 16134274 16135213 - MGP_BALBcJ_P0043615 Olfr167 protein_coding protein_coding MGP_BALBcJ_T0100815.1 MGP_BALBcJ_G0038851.1 mouse_genomes_project 16 75532235 75532365 - Gm25038 snoRNA snoRNA MGP_BALBcJ_T0043504.1 MGP_BALBcJ_G0022570.1 mouse_genomes_project 16 14813428 14828345 - MGP_BALBcJ_P0043504 Zdhhc8 protein_coding protein_coding MGP_BALBcJ_T0043665.1 MGP_BALBcJ_G0022609.1 mouse_genomes_project 16 17153804 17167919 + MGP_BALBcJ_P0043665 Dvl3 protein_coding protein_coding MGP_BALBcJ_T0043666.1 MGP_BALBcJ_G0022609.1 mouse_genomes_project 16 17153886 17168789 + MGP_BALBcJ_P0043666 Dvl3 protein_coding protein_coding MGP_BALBcJ_T0043667.1 MGP_BALBcJ_G0022609.1 mouse_genomes_project 16 17153928 17167915 + MGP_BALBcJ_P0043667 Dvl3 protein_coding protein_coding MGP_BALBcJ_T0042950.1 MGP_BALBcJ_G0022438.1 mouse_genomes_project 16 1209559 1244538 + MGP_BALBcJ_P0042950 Hmox2 protein_coding protein_coding MGP_BALBcJ_T0042951.1 MGP_BALBcJ_G0022438.1 mouse_genomes_project 16 1209561 1246432 + MGP_BALBcJ_P0042951 Hmox2 protein_coding protein_coding MGP_BALBcJ_T0042952.1 MGP_BALBcJ_G0022438.1 mouse_genomes_project 16 1227338 1245939 + MGP_BALBcJ_P0042952 Hmox2 protein_coding protein_coding MGP_BALBcJ_T0042953.1 MGP_BALBcJ_G0022438.1 mouse_genomes_project 16 1236695 1245935 + MGP_BALBcJ_P0042953 Hmox2 protein_coding protein_coding MGP_BALBcJ_T0042954.1 MGP_BALBcJ_G0022438.1 mouse_genomes_project 16 1236701 1244780 + MGP_BALBcJ_P0042954 Hmox2 protein_coding protein_coding MGP_BALBcJ_T0099525.1 MGP_BALBcJ_G0037561.1 mouse_genomes_project 16 33024090 33024194 - Gm25024 snRNA snRNA MGP_BALBcJ_T0017487.1 MGP_BALBcJ_G0015266.1 mouse_genomes_project 16 88682238 88687230 + A930006K02Rik processed_transcript processed_transcript MGP_BALBcJ_T0045273.1 MGP_BALBcJ_G0023048.1 mouse_genomes_project 16 93259997 93271672 - MGP_BALBcJ_P0045273 Psmg1 protein_coding protein_coding MGP_BALBcJ_T0045274.1 MGP_BALBcJ_G0023048.1 mouse_genomes_project 16 93260101 93271602 - MGP_BALBcJ_P0045274 Psmg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045275.1 MGP_BALBcJ_G0023048.1 mouse_genomes_project 16 93260101 93271602 - MGP_BALBcJ_P0045275 Psmg1 protein_coding protein_coding MGP_BALBcJ_T0045276.1 MGP_BALBcJ_G0023048.1 mouse_genomes_project 16 93268697 93270610 - Psmg1 protein_coding retained_intron MGP_BALBcJ_T0000041.1 MGP_BALBcJ_G0000033.1 mouse_genomes_project 16 15683340 15683378 - MGP_BALBcJ_P0000041 Iglj3p IG_J_gene IG_J_gene MGP_BALBcJ_T0044132.1 MGP_BALBcJ_G0022722.1 mouse_genomes_project 16 30177024 30302093 + MGP_BALBcJ_P0044132 Zfp148 protein_coding protein_coding MGP_BALBcJ_T0044133.1 MGP_BALBcJ_G0022722.1 mouse_genomes_project 16 30197433 30296628 + MGP_BALBcJ_P0044133 Zfp148 protein_coding protein_coding MGP_BALBcJ_T0044794.1 MGP_BALBcJ_G0022909.1 mouse_genomes_project 16 61428526 61429862 - MGP_BALBcJ_P0044794 Csnka2ip protein_coding protein_coding MGP_BALBcJ_T0043579.1 MGP_BALBcJ_G0022582.1 mouse_genomes_project 16 15224691 15232817 - MGP_BALBcJ_P0043579 Sept5 protein_coding protein_coding MGP_BALBcJ_T0043580.1 MGP_BALBcJ_G0022582.1 mouse_genomes_project 16 15225620 15229047 - MGP_BALBcJ_P0043580 Sept5 protein_coding unknown_likely_coding MGP_BALBcJ_T0098852.1 MGP_BALBcJ_G0036901.1 mouse_genomes_project 16 89327550 89329469 + Gm16310 sense_intronic sense_intronic MGP_BALBcJ_T0044689.1 MGP_BALBcJ_G0022866.1 mouse_genomes_project 16 54188909 54412847 + MGP_BALBcJ_P0044689 Filip1l protein_coding protein_coding MGP_BALBcJ_T0044690.1 MGP_BALBcJ_G0022866.1 mouse_genomes_project 16 54189093 54354028 + MGP_BALBcJ_P0044690 Filip1l protein_coding protein_coding MGP_BALBcJ_T0044691.1 MGP_BALBcJ_G0022866.1 mouse_genomes_project 16 54387681 54412525 + MGP_BALBcJ_P0044691 Filip1l protein_coding protein_coding MGP_BALBcJ_T0098532.1 MGP_BALBcJ_G0036586.1 mouse_genomes_project 16 58320721 58320839 - n-R5s37 rRNA rRNA MGP_BALBcJ_T0013090.1 MGP_BALBcJ_G0011187.1 mouse_genomes_project 16 6574380 6574587 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044806.1 MGP_BALBcJ_G0022915.1 mouse_genomes_project 16 62496566 62520308 - MGP_BALBcJ_P0044806 Chmp2b protein_coding protein_coding MGP_BALBcJ_T0017451.1 MGP_BALBcJ_G0015252.1 mouse_genomes_project 16 17143580 17154589 - processed_transcript processed_transcript MGP_BALBcJ_T0042926.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1106368 1161518 - MGP_BALBcJ_P0042926 Coro7 protein_coding protein_coding MGP_BALBcJ_T0042927.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1107612 1109107 - Coro7 protein_coding processed_transcript MGP_BALBcJ_T0042928.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1108987 1109902 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0042929.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1109294 1161419 - MGP_BALBcJ_P0042929 Coro7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042930.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1112113 1114095 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0042931.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1112481 1115271 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0042932.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1113512 1126994 - Coro7 protein_coding processed_transcript MGP_BALBcJ_T0042933.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1113559 1115277 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0042934.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1114833 1142115 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0042938.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1132843 1161518 - MGP_BALBcJ_P0042938 Coro7 protein_coding protein_coding MGP_BALBcJ_T0042939.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1140494 1161454 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0042940.1 MGP_BALBcJ_G0022434.1 mouse_genomes_project 16 1156994 1161483 - Coro7 protein_coding retained_intron MGP_BALBcJ_T0013163.1 MGP_BALBcJ_G0011260.1 mouse_genomes_project 16 64561884 64562406 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102271.1 MGP_BALBcJ_G0040087.1 mouse_genomes_project 16 55869026 55870088 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0098847.1 MGP_BALBcJ_G0036896.1 mouse_genomes_project 16 1257481 1259193 - Gm15835 sense_intronic sense_intronic MGP_BALBcJ_T0045193.1 MGP_BALBcJ_G0023037.1 mouse_genomes_project 16 91359150 91400910 + MGP_BALBcJ_P0045193 Sim2 protein_coding protein_coding MGP_BALBcJ_T0043860.1 MGP_BALBcJ_G0022654.1 mouse_genomes_project 16 20715975 20721196 - MGP_BALBcJ_P0043860 Rtp2 protein_coding protein_coding MGP_BALBcJ_T0011394.1 MGP_BALBcJ_G0009519.1 mouse_genomes_project 16 78350061 78350374 - Gm26023 misc_RNA misc_RNA MGP_BALBcJ_T0013162.1 MGP_BALBcJ_G0011259.1 mouse_genomes_project 16 61876369 61878006 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043477.1 MGP_BALBcJ_G0022560.1 mouse_genomes_project 16 14487446 14488833 + MGP_BALBcJ_P0043477 Tssk2 protein_coding protein_coding MGP_BALBcJ_T0044228.1 MGP_BALBcJ_G0022749.1 mouse_genomes_project 16 33060939 33068425 + MGP_BALBcJ_P0044228 Gm5416 protein_coding protein_coding MGP_BALBcJ_T0045337.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95105505 95166936 - MGP_BALBcJ_P0045337 Prdm15 protein_coding protein_coding MGP_BALBcJ_T0045338.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95105558 95167559 - MGP_BALBcJ_P0045338 Prdm15 protein_coding protein_coding MGP_BALBcJ_T0045339.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95105915 95167492 - MGP_BALBcJ_P0045339 Prdm15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045340.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95106368 95114930 - Prdm15 protein_coding retained_intron MGP_BALBcJ_T0045341.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95108216 95167502 - MGP_BALBcJ_P0045341 Prdm15 protein_coding unknown_likely_coding MGP_BALBcJ_T0045342.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95108554 95118558 - Prdm15 protein_coding processed_transcript MGP_BALBcJ_T0045343.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95110349 95112547 - Prdm15 protein_coding retained_intron MGP_BALBcJ_T0045344.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95134540 95145494 - Prdm15 protein_coding retained_intron MGP_BALBcJ_T0045345.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95151073 95155675 - Prdm15 protein_coding retained_intron MGP_BALBcJ_T0045346.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95151491 95164592 - MGP_BALBcJ_P0045346 Prdm15 protein_coding protein_coding MGP_BALBcJ_T0045347.1 MGP_BALBcJ_G0023064.1 mouse_genomes_project 16 95153388 95166936 - MGP_BALBcJ_P0045347 Prdm15 protein_coding protein_coding MGP_BALBcJ_T0043901.1 MGP_BALBcJ_G0022669.1 mouse_genomes_project 16 25603813 25703820 - MGP_BALBcJ_P0043901 Mb21d2 protein_coding protein_coding MGP_BALBcJ_T0044330.1 MGP_BALBcJ_G0022774.1 mouse_genomes_project 16 34895585 35053605 + MGP_BALBcJ_P0044330 Gsk3b protein_coding protein_coding MGP_BALBcJ_T0044331.1 MGP_BALBcJ_G0022774.1 mouse_genomes_project 16 34896872 35048295 + MGP_BALBcJ_P0044331 Gsk3b protein_coding protein_coding MGP_BALBcJ_T0044332.1 MGP_BALBcJ_G0022774.1 mouse_genomes_project 16 34949866 34998366 + Gsk3b protein_coding processed_transcript MGP_BALBcJ_T0044333.1 MGP_BALBcJ_G0022774.1 mouse_genomes_project 16 34950828 35016196 + Gsk3b protein_coding retained_intron MGP_BALBcJ_T0013086.1 MGP_BALBcJ_G0011183.1 mouse_genomes_project 16 1018051 1018439 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043284.1 MGP_BALBcJ_G0022527.1 mouse_genomes_project 16 13423008 13426707 - MGP_BALBcJ_P0043284 Igll1 protein_coding protein_coding MGP_BALBcJ_T0043285.1 MGP_BALBcJ_G0022527.1 mouse_genomes_project 16 13423008 13426539 - MGP_BALBcJ_P0043285 Igll1 protein_coding protein_coding MGP_BALBcJ_T0043286.1 MGP_BALBcJ_G0022527.1 mouse_genomes_project 16 13423011 13426707 - Igll1 protein_coding retained_intron MGP_BALBcJ_T0044929.1 MGP_BALBcJ_G0022952.1 mouse_genomes_project 16 85086860 85244299 - MGP_BALBcJ_P0044929 Grik1 protein_coding protein_coding MGP_BALBcJ_T0044930.1 MGP_BALBcJ_G0022952.1 mouse_genomes_project 16 85086860 85270339 - MGP_BALBcJ_P0044930 Grik1 protein_coding unknown_likely_coding MGP_BALBcJ_T0044931.1 MGP_BALBcJ_G0022952.1 mouse_genomes_project 16 85086860 85244299 - MGP_BALBcJ_P0044931 Grik1 protein_coding protein_coding MGP_BALBcJ_T0044932.1 MGP_BALBcJ_G0022952.1 mouse_genomes_project 16 85086860 85244915 - MGP_BALBcJ_P0044932 Grik1 protein_coding unknown_likely_coding MGP_BALBcJ_T0044933.1 MGP_BALBcJ_G0022952.1 mouse_genomes_project 16 85103043 85244299 - MGP_BALBcJ_P0044933 Grik1 protein_coding protein_coding MGP_BALBcJ_T0044490.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757436 41776198 + MGP_BALBcJ_P0044490 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044491.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757436 41775512 + MGP_BALBcJ_P0044491 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044492.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757436 41776905 + MGP_BALBcJ_P0044492 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044493.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757436 41776198 + MGP_BALBcJ_P0044493 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044494.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757436 41775512 + MGP_BALBcJ_P0044494 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044495.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757450 41792090 + MGP_BALBcJ_P0044495 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044496.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757464 41792062 + MGP_BALBcJ_P0044496 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044497.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757500 41777120 + MGP_BALBcJ_P0044497 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044498.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41757507 41771697 + MGP_BALBcJ_P0044498 Cd200r3 protein_coding protein_coding MGP_BALBcJ_T0044499.1 MGP_BALBcJ_G0022812.1 mouse_genomes_project 16 41776083 41777684 + Cd200r3 protein_coding retained_intron MGP_BALBcJ_T0003650.1 MGP_BALBcJ_G0003305.1 mouse_genomes_project 16 30587473 30597489 - Gm15657 antisense antisense MGP_BALBcJ_T0003651.1 MGP_BALBcJ_G0003305.1 mouse_genomes_project 16 30595782 30597487 - Gm15657 antisense antisense MGP_BALBcJ_T0003652.1 MGP_BALBcJ_G0003305.1 mouse_genomes_project 16 30596113 30598265 - Gm15657 antisense antisense MGP_BALBcJ_T0044345.1 MGP_BALBcJ_G0022779.1 mouse_genomes_project 16 35178061 35192419 + MGP_BALBcJ_P0044345 Popdc2 protein_coding protein_coding MGP_BALBcJ_T0044346.1 MGP_BALBcJ_G0022779.1 mouse_genomes_project 16 35178097 35192419 + MGP_BALBcJ_P0044346 Popdc2 protein_coding protein_coding MGP_BALBcJ_T0044347.1 MGP_BALBcJ_G0022779.1 mouse_genomes_project 16 35183000 35188389 + Popdc2 protein_coding processed_transcript MGP_BALBcJ_T0044348.1 MGP_BALBcJ_G0022779.1 mouse_genomes_project 16 35183620 35191966 + Popdc2 protein_coding processed_transcript MGP_BALBcJ_T0044349.1 MGP_BALBcJ_G0022779.1 mouse_genomes_project 16 35186192 35188332 + Popdc2 protein_coding processed_transcript MGP_BALBcJ_T0044473.1 MGP_BALBcJ_G0022806.1 mouse_genomes_project 16 41291572 41365479 - MGP_BALBcJ_P0044473 Boc protein_coding protein_coding MGP_BALBcJ_T0044474.1 MGP_BALBcJ_G0022806.1 mouse_genomes_project 16 41291576 41365506 - MGP_BALBcJ_P0044474 Boc protein_coding protein_coding MGP_BALBcJ_T0044475.1 MGP_BALBcJ_G0022806.1 mouse_genomes_project 16 41291579 41327962 - MGP_BALBcJ_P0044475 Boc protein_coding unknown_likely_coding MGP_BALBcJ_T0010098.1 MGP_BALBcJ_G0008223.1 mouse_genomes_project 16 13690207 13690289 - Mir130b miRNA miRNA MGP_BALBcJ_T0044446.1 MGP_BALBcJ_G0022801.1 mouse_genomes_project 16 40928425 40950512 + MGP_BALBcJ_P0044446 Naa50 protein_coding protein_coding MGP_BALBcJ_T0044447.1 MGP_BALBcJ_G0022801.1 mouse_genomes_project 16 40928448 40951404 + MGP_BALBcJ_P0044447 Naa50 protein_coding protein_coding MGP_BALBcJ_T0044448.1 MGP_BALBcJ_G0022801.1 mouse_genomes_project 16 40928481 40950510 + MGP_BALBcJ_P0044448 Naa50 protein_coding protein_coding MGP_BALBcJ_T0044449.1 MGP_BALBcJ_G0022801.1 mouse_genomes_project 16 40928487 40949212 + MGP_BALBcJ_P0044449 Naa50 protein_coding protein_coding MGP_BALBcJ_T0017497.1 MGP_BALBcJ_G0015271.1 mouse_genomes_project 16 93327000 93329654 + Gm15342 processed_transcript processed_transcript MGP_BALBcJ_T0011393.1 MGP_BALBcJ_G0009518.1 mouse_genomes_project 16 65945111 65945397 + Gm23591 misc_RNA misc_RNA MGP_BALBcJ_T0013119.1 MGP_BALBcJ_G0011216.1 mouse_genomes_project 16 19955152 19955606 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043170.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10234621 10269640 + MGP_BALBcJ_P0043170 Bfar protein_coding protein_coding MGP_BALBcJ_T0043172.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10234713 10265376 + MGP_BALBcJ_P0043172 Bfar protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043173.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10234783 10269630 + MGP_BALBcJ_P0043173 Bfar protein_coding protein_coding MGP_BALBcJ_T0043174.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10234825 10252306 + Bfar protein_coding retained_intron MGP_BALBcJ_T0043175.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10251602 10254224 + Bfar protein_coding retained_intron MGP_BALBcJ_T0043176.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10251920 10254669 + Bfar protein_coding retained_intron MGP_BALBcJ_T0043177.1 MGP_BALBcJ_G0022498.1 mouse_genomes_project 16 10258682 10263594 + Bfar protein_coding retained_intron MGP_BALBcJ_T0044224.1 MGP_BALBcJ_G0022746.1 mouse_genomes_project 16 32937248 32949997 - MGP_BALBcJ_P0044224 Csta1 protein_coding protein_coding MGP_BALBcJ_T0044225.1 MGP_BALBcJ_G0022746.1 mouse_genomes_project 16 32939471 32949961 - MGP_BALBcJ_P0044225 Csta1 protein_coding protein_coding MGP_BALBcJ_T0010131.1 MGP_BALBcJ_G0008256.1 mouse_genomes_project 16 57637333 57637446 - Gm27784 miRNA miRNA MGP_BALBcJ_T0043150.1 MGP_BALBcJ_G0022492.1 mouse_genomes_project 16 8360194 8465079 - MGP_BALBcJ_P0043150 Cpped1 protein_coding protein_coding MGP_BALBcJ_T0043151.1 MGP_BALBcJ_G0022492.1 mouse_genomes_project 16 8360200 8465078 - MGP_BALBcJ_P0043151 Cpped1 protein_coding protein_coding MGP_BALBcJ_T0043152.1 MGP_BALBcJ_G0022492.1 mouse_genomes_project 16 8387081 8465052 - Cpped1 protein_coding retained_intron MGP_BALBcJ_T0043153.1 MGP_BALBcJ_G0022492.1 mouse_genomes_project 16 8388070 8465054 - MGP_BALBcJ_P0043153 Cpped1 protein_coding protein_coding MGP_BALBcJ_T0043154.1 MGP_BALBcJ_G0022492.1 mouse_genomes_project 16 8438905 8465101 - MGP_BALBcJ_P0043154 Cpped1 protein_coding protein_coding MGP_BALBcJ_T0043784.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18782602 18887476 - Igf2bp2 protein_coding retained_intron MGP_BALBcJ_T0043785.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18782623 18812806 - Igf2bp2 protein_coding retained_intron MGP_BALBcJ_T0043786.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18784342 18887420 - MGP_BALBcJ_P0043786 Igf2bp2 protein_coding protein_coding MGP_BALBcJ_T0043787.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18784915 18787247 - Igf2bp2 protein_coding retained_intron MGP_BALBcJ_T0043788.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18799718 18802819 - Igf2bp2 protein_coding retained_intron MGP_BALBcJ_T0043789.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18807643 18861984 - Igf2bp2 protein_coding processed_transcript MGP_BALBcJ_T0043790.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18876236 18887449 - Igf2bp2 protein_coding processed_transcript MGP_BALBcJ_T0043791.1 MGP_BALBcJ_G0022632.1 mouse_genomes_project 16 18885337 18887432 - Igf2bp2 protein_coding retained_intron MGP_BALBcJ_T0044953.1 MGP_BALBcJ_G0022970.1 mouse_genomes_project 16 86075923 86076227 - MGP_BALBcJ_P0044953 Krtap19-4 protein_coding protein_coding MGP_BALBcJ_T0042876.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 427529 437531 - MGP_BALBcJ_P0042876 Slx4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042877.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 427547 450346 - MGP_BALBcJ_P0042877 Slx4 protein_coding protein_coding MGP_BALBcJ_T0042878.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 427548 444336 - MGP_BALBcJ_P0042878 Slx4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0042879.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 427552 433944 - Slx4 protein_coding retained_intron MGP_BALBcJ_T0042880.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 427557 430629 - Slx4 protein_coding retained_intron MGP_BALBcJ_T0042881.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 443385 449918 - MGP_BALBcJ_P0042881 Slx4 protein_coding protein_coding MGP_BALBcJ_T0042882.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 449668 452436 - MGP_BALBcJ_P0042882 Slx4 protein_coding protein_coding MGP_BALBcJ_T0042883.1 MGP_BALBcJ_G0022424.1 mouse_genomes_project 16 449866 452418 - MGP_BALBcJ_P0042883 Slx4 protein_coding protein_coding MGP_BALBcJ_T0013088.1 MGP_BALBcJ_G0011185.1 mouse_genomes_project 16 5148531 5149066 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0043503.1 MGP_BALBcJ_G0022569.1 mouse_genomes_project 16 14810844 14811988 + MGP_BALBcJ_P0043503 Ccdc188 protein_coding protein_coding MGP_BALBcJ_T0043422.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207798 14233314 + MGP_BALBcJ_P0043422 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043423.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207801 14227761 + Smpd4 protein_coding processed_transcript MGP_BALBcJ_T0043424.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207801 14233313 + MGP_BALBcJ_P0043424 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043425.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207801 14214891 + MGP_BALBcJ_P0043425 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043426.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207804 14215093 + MGP_BALBcJ_P0043426 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043427.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207804 14231833 + MGP_BALBcJ_P0043427 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043428.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207807 14212729 + Smpd4 protein_coding retained_intron MGP_BALBcJ_T0043429.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207807 14233313 + Smpd4 protein_coding retained_intron MGP_BALBcJ_T0043430.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207807 14210440 + Smpd4 protein_coding retained_intron MGP_BALBcJ_T0043431.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207807 14233313 + MGP_BALBcJ_P0043431 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043432.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207807 14214285 + MGP_BALBcJ_P0043432 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043433.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207818 14227011 + MGP_BALBcJ_P0043433 Smpd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043434.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207821 14215130 + MGP_BALBcJ_P0043434 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043435.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207825 14230634 + Smpd4 protein_coding retained_intron MGP_BALBcJ_T0043436.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207833 14214449 + MGP_BALBcJ_P0043436 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043437.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14207961 14212391 + MGP_BALBcJ_P0043437 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043438.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14209931 14231289 + MGP_BALBcJ_P0043438 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043439.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14209931 14231289 + MGP_BALBcJ_P0043439 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043440.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14209931 14231289 + MGP_BALBcJ_P0043440 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043441.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14209931 14231289 + MGP_BALBcJ_P0043441 Smpd4 protein_coding protein_coding MGP_BALBcJ_T0043442.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14209931 14231289 + MGP_BALBcJ_P0043442 Smpd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0043443.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14226807 14229548 + Smpd4 protein_coding retained_intron MGP_BALBcJ_T0043444.1 MGP_BALBcJ_G0022551.1 mouse_genomes_project 16 14227072 14229452 + Smpd4 protein_coding retained_intron MGP_BALBcJ_T0098531.1 MGP_BALBcJ_G0036585.1 mouse_genomes_project 16 45243535 45243654 - n-R5s36 rRNA rRNA MGP_BALBcJ_T0010090.1 MGP_BALBcJ_G0008215.1 mouse_genomes_project 16 6810652 6810724 + Gm22932 miRNA miRNA MGP_BALBcJ_T0013156.1 MGP_BALBcJ_G0011253.1 mouse_genomes_project 16 53594258 53594895 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0044866.1 MGP_BALBcJ_G0022935.1 mouse_genomes_project 16 76028744 76163678 - MGP_BALBcJ_P0044866 Tmprss15 protein_coding protein_coding MGP_BALBcJ_T0044867.1 MGP_BALBcJ_G0022935.1 mouse_genomes_project 16 76029200 76163683 - MGP_BALBcJ_P0044867 Tmprss15 protein_coding protein_coding MGP_BALBcJ_T0044465.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41190864 41200365 + Cfap44 protein_coding retained_intron MGP_BALBcJ_T0044466.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41190867 41288964 + MGP_BALBcJ_P0044466 Cfap44 protein_coding protein_coding MGP_BALBcJ_T0044467.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41190890 41197426 + Cfap44 protein_coding retained_intron MGP_BALBcJ_T0044468.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41196852 41288630 + MGP_BALBcJ_P0044468 Cfap44 protein_coding protein_coding MGP_BALBcJ_T0044469.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41204045 41226264 + Cfap44 protein_coding retained_intron MGP_BALBcJ_T0044470.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41228247 41237584 + Cfap44 protein_coding processed_transcript MGP_BALBcJ_T0044471.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41260740 41288630 + MGP_BALBcJ_P0044471 Cfap44 protein_coding protein_coding MGP_BALBcJ_T0044472.1 MGP_BALBcJ_G0022805.1 mouse_genomes_project 16 41276138 41288964 + Cfap44 protein_coding retained_intron MGP_BALBcJ_T0013102.1 MGP_BALBcJ_G0011199.1 mouse_genomes_project 16 12942577 12943551 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010137.1 MGP_BALBcJ_G0008262.1 mouse_genomes_project 16 74693458 74693523 + Mir99a miRNA miRNA MGP_BALBcJ_T0047164.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33950887 33956889 + MGP_BALBcJ_P0047164 Nelfe protein_coding protein_coding MGP_BALBcJ_T0047165.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33950894 33956774 + MGP_BALBcJ_P0047165 Nelfe protein_coding protein_coding MGP_BALBcJ_T0047166.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33950904 33954609 + MGP_BALBcJ_P0047166 Nelfe protein_coding protein_coding MGP_BALBcJ_T0047167.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33950904 33956892 + MGP_BALBcJ_P0047167 Nelfe protein_coding protein_coding MGP_BALBcJ_T0047168.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33953104 33954365 + Nelfe protein_coding retained_intron MGP_BALBcJ_T0047169.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33954431 33955046 + Nelfe protein_coding retained_intron MGP_BALBcJ_T0047170.1 MGP_BALBcJ_G0023559.1 mouse_genomes_project 17 33954775 33955274 + Nelfe protein_coding retained_intron MGP_BALBcJ_T0102340.1 MGP_BALBcJ_G0040156.1 mouse_genomes_project 17 35925605 35931172 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013261.1 MGP_BALBcJ_G0011358.1 mouse_genomes_project 17 61353719 61354761 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010167.1 MGP_BALBcJ_G0008292.1 mouse_genomes_project 17 25620098 25620162 - Mir3083 miRNA miRNA MGP_BALBcJ_T0046465.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27076921 27079522 + MGP_BALBcJ_P0046465 Rpl10a protein_coding protein_coding MGP_BALBcJ_T0046466.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27077033 27078089 + Rpl10a protein_coding retained_intron MGP_BALBcJ_T0046467.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27077034 27079522 + MGP_BALBcJ_P0046467 Rpl10a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046468.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27077060 27077846 + Rpl10a protein_coding retained_intron MGP_BALBcJ_T0046469.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27077097 27077973 + Rpl10a protein_coding retained_intron MGP_BALBcJ_T0046470.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27077261 27079187 + Rpl10a protein_coding retained_intron MGP_BALBcJ_T0046471.1 MGP_BALBcJ_G0023401.1 mouse_genomes_project 17 27077728 27079517 + Rpl10a protein_coding retained_intron MGP_BALBcJ_T0102350.1 MGP_BALBcJ_G0040166.1 mouse_genomes_project 17 36694288 36695680 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045509.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10196275 10202436 + Tcp1 protein_coding processed_transcript MGP_BALBcJ_T0045510.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10197013 10202701 + MGP_BALBcJ_P0045510 Tcp1 protein_coding protein_coding MGP_BALBcJ_T0045511.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10197023 10204550 + Tcp1 protein_coding retained_intron MGP_BALBcJ_T0045512.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10197023 10208865 + Tcp1 protein_coding retained_intron MGP_BALBcJ_T0045513.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10197049 10203880 + Tcp1 protein_coding retained_intron MGP_BALBcJ_T0045514.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10197140 10208798 + MGP_BALBcJ_P0045514 Tcp1 protein_coding protein_coding MGP_BALBcJ_T0045515.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10203994 10204962 + Tcp1 protein_coding retained_intron MGP_BALBcJ_T0045516.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10204438 10207054 + Tcp1 protein_coding retained_intron MGP_BALBcJ_T0045517.1 MGP_BALBcJ_G0023122.1 mouse_genomes_project 17 10204602 10205470 + Tcp1 protein_coding retained_intron MGP_BALBcJ_T0048373.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66426478 66540845 - MGP_BALBcJ_P0048373 Mtcl1 protein_coding protein_coding MGP_BALBcJ_T0048374.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66426482 66540845 - MGP_BALBcJ_P0048374 Mtcl1 protein_coding protein_coding MGP_BALBcJ_T0048375.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66426484 66475614 - MGP_BALBcJ_P0048375 Mtcl1 protein_coding protein_coding MGP_BALBcJ_T0048376.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66427174 66529873 - MGP_BALBcJ_P0048376 Mtcl1 protein_coding protein_coding MGP_BALBcJ_T0048377.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66433422 66436023 - Mtcl1 protein_coding retained_intron MGP_BALBcJ_T0048378.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66437443 66468641 - Mtcl1 protein_coding retained_intron MGP_BALBcJ_T0048379.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66443677 66452492 - Mtcl1 protein_coding processed_transcript MGP_BALBcJ_T0048380.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66443842 66468126 - Mtcl1 protein_coding processed_transcript MGP_BALBcJ_T0048381.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66447770 66467740 - Mtcl1 protein_coding retained_intron MGP_BALBcJ_T0048382.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66456039 66464352 - Mtcl1 protein_coding processed_transcript MGP_BALBcJ_T0048383.1 MGP_BALBcJ_G0023946.1 mouse_genomes_project 17 66475448 66539464 - Mtcl1 protein_coding retained_intron MGP_BALBcJ_T0046567.1 MGP_BALBcJ_G0023422.1 mouse_genomes_project 17 27951194 28032055 - MGP_BALBcJ_P0046567 Cpne5 protein_coding protein_coding MGP_BALBcJ_T0046568.1 MGP_BALBcJ_G0023422.1 mouse_genomes_project 17 27952560 27978620 - Cpne5 protein_coding processed_transcript MGP_BALBcJ_T0046569.1 MGP_BALBcJ_G0023422.1 mouse_genomes_project 17 27964121 27971177 - Cpne5 protein_coding processed_transcript MGP_BALBcJ_T0046570.1 MGP_BALBcJ_G0023422.1 mouse_genomes_project 17 27982847 28032017 - MGP_BALBcJ_P0046570 Cpne5 protein_coding protein_coding MGP_BALBcJ_T0046571.1 MGP_BALBcJ_G0023422.1 mouse_genomes_project 17 28011738 28031970 - Cpne5 protein_coding retained_intron MGP_BALBcJ_T0048293.1 MGP_BALBcJ_G0023914.1 mouse_genomes_project 17 57057491 57071880 - MGP_BALBcJ_P0048293 protein_coding protein_coding MGP_BALBcJ_T0046117.1 MGP_BALBcJ_G0023321.1 mouse_genomes_project 17 24078165 24085582 - MGP_BALBcJ_P0046117 Sstr5 protein_coding protein_coding MGP_BALBcJ_T0046118.1 MGP_BALBcJ_G0023321.1 mouse_genomes_project 17 24078165 24085582 - MGP_BALBcJ_P0046118 Sstr5 protein_coding protein_coding MGP_BALBcJ_T0047175.1 MGP_BALBcJ_G0023561.1 mouse_genomes_project 17 33956931 33982663 - MGP_BALBcJ_P0047175 Gm20547 protein_coding protein_coding MGP_BALBcJ_T0047176.1 MGP_BALBcJ_G0023561.1 mouse_genomes_project 17 33956945 33973030 - MGP_BALBcJ_P0047176 Gm20547 protein_coding protein_coding MGP_BALBcJ_T0047178.1 MGP_BALBcJ_G0023561.1 mouse_genomes_project 17 33956946 33982616 - MGP_BALBcJ_P0047178 Gm20547 protein_coding unknown_likely_coding MGP_BALBcJ_T0048150.1 MGP_BALBcJ_G0023854.1 mouse_genomes_project 17 53876530 53903967 - MGP_BALBcJ_P0048150 Sult1c1 protein_coding protein_coding MGP_BALBcJ_T0102330.1 MGP_BALBcJ_G0040146.1 mouse_genomes_project 17 35457908 35458135 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045639.1 MGP_BALBcJ_G0023158.1 mouse_genomes_project 17 15941209 15969076 + MGP_BALBcJ_P0045639 Vmn2r93 protein_coding protein_coding MGP_BALBcJ_T0102360.1 MGP_BALBcJ_G0040176.1 mouse_genomes_project 17 36911729 36912285 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048097.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49347158 49357070 + MGP_BALBcJ_P0048097 Mocs1 protein_coding protein_coding MGP_BALBcJ_T0048098.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49347238 49366327 + MGP_BALBcJ_P0048098 Mocs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048099.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49347238 49366327 + MGP_BALBcJ_P0048099 Mocs1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048100.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49347238 49366327 + MGP_BALBcJ_P0048100 Mocs1 protein_coding protein_coding MGP_BALBcJ_T0048101.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49351996 49354321 + Mocs1 protein_coding processed_transcript MGP_BALBcJ_T0048102.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49361473 49365805 + MGP_BALBcJ_P0048102 Mocs1 protein_coding protein_coding MGP_BALBcJ_T0048103.1 MGP_BALBcJ_G0023839.1 mouse_genomes_project 17 49363925 49366995 + MGP_BALBcJ_P0048103 Mocs1 protein_coding protein_coding MGP_BALBcJ_T0102312.1 MGP_BALBcJ_G0040128.1 mouse_genomes_project 17 32930035 32934446 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046629.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28638234 28698296 - MGP_BALBcJ_P0046629 Mdga1 protein_coding protein_coding MGP_BALBcJ_T0046630.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28638236 28697548 - MGP_BALBcJ_P0046630 Mdga1 protein_coding protein_coding MGP_BALBcJ_T0046631.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28642326 28652426 - Mdga1 protein_coding retained_intron MGP_BALBcJ_T0046632.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28642536 28645352 - Mdga1 protein_coding processed_transcript MGP_BALBcJ_T0046633.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28642553 28649915 - MGP_BALBcJ_P0046633 Mdga1 protein_coding protein_coding MGP_BALBcJ_T0046634.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28652123 28780689 - MGP_BALBcJ_P0046634 Mdga1 protein_coding protein_coding MGP_BALBcJ_T0046635.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28659684 28697148 - MGP_BALBcJ_P0046635 Mdga1 protein_coding protein_coding MGP_BALBcJ_T0046636.1 MGP_BALBcJ_G0023436.1 mouse_genomes_project 17 28660565 28699610 - Mdga1 protein_coding processed_transcript MGP_BALBcJ_T0048055.1 MGP_BALBcJ_G0023828.1 mouse_genomes_project 17 48165869 48176936 + MGP_BALBcJ_P0048055 Treml4 protein_coding protein_coding MGP_BALBcJ_T0048056.1 MGP_BALBcJ_G0023828.1 mouse_genomes_project 17 48165911 48176069 + MGP_BALBcJ_P0048056 Treml4 protein_coding protein_coding MGP_BALBcJ_T0048057.1 MGP_BALBcJ_G0023828.1 mouse_genomes_project 17 48165911 48176069 + MGP_BALBcJ_P0048057 Treml4 protein_coding protein_coding MGP_BALBcJ_T0048058.1 MGP_BALBcJ_G0023828.1 mouse_genomes_project 17 48165915 48176242 + MGP_BALBcJ_P0048058 Treml4 protein_coding protein_coding MGP_BALBcJ_T0048059.1 MGP_BALBcJ_G0023828.1 mouse_genomes_project 17 48165947 48176076 + MGP_BALBcJ_P0048059 Treml4 protein_coding protein_coding MGP_BALBcJ_T0048060.1 MGP_BALBcJ_G0023828.1 mouse_genomes_project 17 48174014 48176088 + Treml4 protein_coding retained_intron MGP_BALBcJ_T0045488.1 MGP_BALBcJ_G0023115.1 mouse_genomes_project 17 9849445 9892757 + MGP_BALBcJ_P0045488 Slc22a2 protein_coding protein_coding MGP_BALBcJ_T0010160.1 MGP_BALBcJ_G0008285.1 mouse_genomes_project 17 23814694 23814782 - Mir3547 miRNA miRNA MGP_BALBcJ_T0006891.1 MGP_BALBcJ_G0005670.1 mouse_genomes_project 17 22269943 22273623 + D930048G16Rik lincRNA lincRNA MGP_BALBcJ_T0045630.1 MGP_BALBcJ_G0023151.1 mouse_genomes_project 17 15473442 15480972 - MGP_BALBcJ_P0045630 Fpr1 protein_coding protein_coding MGP_BALBcJ_T0000993.1 MGP_BALBcJ_G0000921.1 mouse_genomes_project 17 84249136 84253201 - TEC TEC MGP_BALBcJ_T0010191.1 MGP_BALBcJ_G0008316.1 mouse_genomes_project 17 35192299 35192384 - Mir877 miRNA miRNA MGP_BALBcJ_T0010177.1 MGP_BALBcJ_G0008302.1 mouse_genomes_project 17 31249492 31249551 + Gm22201 miRNA miRNA MGP_BALBcJ_T0013243.1 MGP_BALBcJ_G0011340.1 mouse_genomes_project 17 47483329 47484878 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047498.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35204067 35213177 - MGP_BALBcJ_P0047498 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047499.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35204067 35212036 - MGP_BALBcJ_P0047499 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047500.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35205030 35211624 - MGP_BALBcJ_P0047500 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047501.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35206286 35212591 - MGP_BALBcJ_P0047501 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047502.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35210824 35212513 - MGP_BALBcJ_P0047502 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047503.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35211060 35212873 - MGP_BALBcJ_P0047503 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047504.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35211228 35212873 - MGP_BALBcJ_P0047504 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047505.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35211483 35212744 - MGP_BALBcJ_P0047505 Prr3 protein_coding protein_coding MGP_BALBcJ_T0047506.1 MGP_BALBcJ_G0023624.1 mouse_genomes_project 17 35211594 35212364 - Prr3 protein_coding retained_intron MGP_BALBcJ_T0013275.1 MGP_BALBcJ_G0011372.1 mouse_genomes_project 17 85238200 85260884 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046787.1 MGP_BALBcJ_G0023477.1 mouse_genomes_project 17 31779712 31789070 - MGP_BALBcJ_P0046787 Zfp870 protein_coding unknown_likely_coding MGP_BALBcJ_T0047459.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35127302 35139779 - MGP_BALBcJ_P0047459 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047460.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35127316 35139750 - MGP_BALBcJ_P0047460 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047461.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35127319 35139761 - MGP_BALBcJ_P0047461 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047462.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35127322 35128290 - Atat1 protein_coding retained_intron MGP_BALBcJ_T0047463.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35127589 35138665 - MGP_BALBcJ_P0047463 Atat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047464.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35129526 35139749 - MGP_BALBcJ_P0047464 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047465.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35129561 35139749 - MGP_BALBcJ_P0047465 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047466.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35130202 35134029 - MGP_BALBcJ_P0047466 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047467.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35131693 35139139 - Atat1 protein_coding retained_intron MGP_BALBcJ_T0047468.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35131710 35139277 - Atat1 protein_coding processed_transcript MGP_BALBcJ_T0047469.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35131714 35138743 - Atat1 protein_coding retained_intron MGP_BALBcJ_T0047470.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35131747 35139330 - MGP_BALBcJ_P0047470 Atat1 protein_coding protein_coding MGP_BALBcJ_T0047471.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35133032 35139443 - Atat1 protein_coding retained_intron MGP_BALBcJ_T0047472.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35137668 35139749 - Atat1 protein_coding processed_transcript MGP_BALBcJ_T0047473.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35138287 35139735 - MGP_BALBcJ_P0047473 Atat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047474.1 MGP_BALBcJ_G0023620.1 mouse_genomes_project 17 35138634 35139713 - Atat1 protein_coding retained_intron MGP_BALBcJ_T0003756.1 MGP_BALBcJ_G0003379.1 mouse_genomes_project 17 47552647 47556119 + Tomm6os antisense antisense MGP_BALBcJ_T0000980.1 MGP_BALBcJ_G0000908.1 mouse_genomes_project 17 51675869 51679028 - TEC TEC MGP_BALBcJ_T0048163.1 MGP_BALBcJ_G0023864.1 mouse_genomes_project 17 55864646 55873405 + MGP_BALBcJ_P0048163 Ccdc94 protein_coding protein_coding MGP_BALBcJ_T0046651.1 MGP_BALBcJ_G0023444.1 mouse_genomes_project 17 29962301 29966713 - MGP_BALBcJ_P0046651 Tff3 protein_coding protein_coding MGP_BALBcJ_T0047528.1 MGP_BALBcJ_G0023635.1 mouse_genomes_project 17 35591604 35592796 - MGP_BALBcJ_P0047528 protein_coding protein_coding MGP_BALBcJ_T0013192.1 MGP_BALBcJ_G0011289.1 mouse_genomes_project 17 20172398 20173140 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046055.1 MGP_BALBcJ_G0023305.1 mouse_genomes_project 17 23727082 23736428 + MGP_BALBcJ_P0046055 Ccdc154 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046056.1 MGP_BALBcJ_G0023305.1 mouse_genomes_project 17 23727082 23736428 + MGP_BALBcJ_P0046056 Ccdc154 protein_coding protein_coding MGP_BALBcJ_T0046057.1 MGP_BALBcJ_G0023305.1 mouse_genomes_project 17 23727085 23736426 + MGP_BALBcJ_P0046057 Ccdc154 protein_coding protein_coding MGP_BALBcJ_T0046058.1 MGP_BALBcJ_G0023305.1 mouse_genomes_project 17 23727463 23736397 + MGP_BALBcJ_P0046058 Ccdc154 protein_coding protein_coding MGP_BALBcJ_T0045374.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 2997565 3088965 + MGP_BALBcJ_P0045374 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045375.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 2997565 3094728 + MGP_BALBcJ_P0045375 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045376.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 2997646 3095564 + MGP_BALBcJ_P0045376 Synj2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045377.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 2997671 3094728 + MGP_BALBcJ_P0045377 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045378.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3032089 3082456 + MGP_BALBcJ_P0045378 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045379.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3032144 3100463 + MGP_BALBcJ_P0045379 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045380.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3032243 3094728 + MGP_BALBcJ_P0045380 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045381.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3044487 3095515 + MGP_BALBcJ_P0045381 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045382.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3046564 3100463 + MGP_BALBcJ_P0045382 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045383.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3052419 3094501 + MGP_BALBcJ_P0045383 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045384.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3053249 3076717 + MGP_BALBcJ_P0045384 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045385.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3064147 3089101 + MGP_BALBcJ_P0045385 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045386.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3064164 3094579 + MGP_BALBcJ_P0045386 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045387.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3064179 3067058 + Synj2 protein_coding processed_transcript MGP_BALBcJ_T0045388.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3069851 3094546 + MGP_BALBcJ_P0045388 Synj2 protein_coding protein_coding MGP_BALBcJ_T0045389.1 MGP_BALBcJ_G0023081.1 mouse_genomes_project 17 3081241 3093635 + MGP_BALBcJ_P0045389 Synj2 protein_coding protein_coding MGP_BALBcJ_T0048338.1 MGP_BALBcJ_G0023935.1 mouse_genomes_project 17 65287785 65584198 - MGP_BALBcJ_P0048338 Tmem232 protein_coding protein_coding MGP_BALBcJ_T0048339.1 MGP_BALBcJ_G0023935.1 mouse_genomes_project 17 65287787 65584192 - MGP_BALBcJ_P0048339 Tmem232 protein_coding protein_coding MGP_BALBcJ_T0046361.1 MGP_BALBcJ_G0023379.1 mouse_genomes_project 17 25810155 25821410 - MGP_BALBcJ_P0046361 Uqcc2 protein_coding protein_coding MGP_BALBcJ_T0046362.1 MGP_BALBcJ_G0023379.1 mouse_genomes_project 17 25810160 25821118 - Uqcc2 protein_coding processed_transcript MGP_BALBcJ_T0046363.1 MGP_BALBcJ_G0023379.1 mouse_genomes_project 17 25810162 25821397 - MGP_BALBcJ_P0046363 Uqcc2 protein_coding protein_coding MGP_BALBcJ_T0046364.1 MGP_BALBcJ_G0023379.1 mouse_genomes_project 17 25810162 25821124 - MGP_BALBcJ_P0046364 Uqcc2 protein_coding protein_coding MGP_BALBcJ_T0098341.1 MGP_BALBcJ_G0036395.1 mouse_genomes_project 17 37071633 37072598 - pseudogene pseudogene MGP_BALBcJ_T0046060.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23753889 23802820 + MGP_BALBcJ_P0046060 protein_coding protein_coding MGP_BALBcJ_T0046061.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23754412 23802820 + MGP_BALBcJ_P0046061 protein_coding protein_coding MGP_BALBcJ_T0046062.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23754961 23772858 + MGP_BALBcJ_P0046062 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046063.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23777797 23780490 + protein_coding retained_intron MGP_BALBcJ_T0046064.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23790991 23797847 + MGP_BALBcJ_P0046064 protein_coding protein_coding MGP_BALBcJ_T0046065.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23791034 23802819 + MGP_BALBcJ_P0046065 protein_coding protein_coding MGP_BALBcJ_T0046067.1 MGP_BALBcJ_G0023307.1 mouse_genomes_project 17 23791231 23800244 + MGP_BALBcJ_P0046067 protein_coding protein_coding MGP_BALBcJ_T0102346.1 MGP_BALBcJ_G0040162.1 mouse_genomes_project 17 36076417 36076745 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048508.1 MGP_BALBcJ_G0023986.1 mouse_genomes_project 17 74514471 74568942 + MGP_BALBcJ_P0048508 Spast protein_coding protein_coding MGP_BALBcJ_T0048509.1 MGP_BALBcJ_G0023986.1 mouse_genomes_project 17 74514521 74568943 + MGP_BALBcJ_P0048509 Spast protein_coding unknown_likely_coding MGP_BALBcJ_T0102276.1 MGP_BALBcJ_G0040092.1 mouse_genomes_project 17 16156138 16157418 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046141.1 MGP_BALBcJ_G0023326.1 mouse_genomes_project 17 24324169 24327895 + MGP_BALBcJ_P0046141 Rpusd1 protein_coding protein_coding MGP_BALBcJ_T0100839.1 MGP_BALBcJ_G0038875.1 mouse_genomes_project 17 48523609 48523741 + Gm24071 snoRNA snoRNA MGP_BALBcJ_T0048193.1 MGP_BALBcJ_G0023876.1 mouse_genomes_project 17 56036522 56053825 - MGP_BALBcJ_P0048193 Sema6b protein_coding protein_coding MGP_BALBcJ_T0048194.1 MGP_BALBcJ_G0023876.1 mouse_genomes_project 17 56036522 56047334 - MGP_BALBcJ_P0048194 Sema6b protein_coding protein_coding MGP_BALBcJ_T0045416.1 MGP_BALBcJ_G0023096.1 mouse_genomes_project 17 5037251 5102827 - MGP_BALBcJ_P0045416 Fndc1 protein_coding protein_coding MGP_BALBcJ_T0045417.1 MGP_BALBcJ_G0023096.1 mouse_genomes_project 17 5045388 5059729 - Fndc1 protein_coding processed_transcript MGP_BALBcJ_T0045418.1 MGP_BALBcJ_G0023096.1 mouse_genomes_project 17 5060011 5066256 - Fndc1 protein_coding retained_intron MGP_BALBcJ_T0045419.1 MGP_BALBcJ_G0023096.1 mouse_genomes_project 17 5080853 5125280 - MGP_BALBcJ_P0045419 Fndc1 protein_coding protein_coding MGP_BALBcJ_T0045420.1 MGP_BALBcJ_G0023096.1 mouse_genomes_project 17 5098718 5125280 - MGP_BALBcJ_P0045420 Fndc1 protein_coding protein_coding MGP_BALBcJ_T0047871.1 MGP_BALBcJ_G0023772.1 mouse_genomes_project 17 46069923 46095432 - MGP_BALBcJ_P0047871 Tjap1 protein_coding protein_coding MGP_BALBcJ_T0047872.1 MGP_BALBcJ_G0023772.1 mouse_genomes_project 17 46069923 46095432 - MGP_BALBcJ_P0047872 Tjap1 protein_coding protein_coding MGP_BALBcJ_T0047873.1 MGP_BALBcJ_G0023772.1 mouse_genomes_project 17 46069923 46095432 - MGP_BALBcJ_P0047873 Tjap1 protein_coding protein_coding MGP_BALBcJ_T0047874.1 MGP_BALBcJ_G0023772.1 mouse_genomes_project 17 46072796 46077316 - MGP_BALBcJ_P0047874 Tjap1 protein_coding unknown_likely_coding MGP_BALBcJ_T0098540.1 MGP_BALBcJ_G0036594.1 mouse_genomes_project 17 47720728 47720847 + n-R5s28 rRNA rRNA MGP_BALBcJ_T0048744.1 MGP_BALBcJ_G0024074.1 mouse_genomes_project 17 89087404 89138616 - MGP_BALBcJ_P0048744 Lhcgr protein_coding protein_coding MGP_BALBcJ_T0013278.1 MGP_BALBcJ_G0011375.1 mouse_genomes_project 17 91119357 91120598 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047521.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466135 35472015 - MGP_BALBcJ_P0047521 protein_coding protein_coding MGP_BALBcJ_T0047522.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466240 35471979 - protein_coding retained_intron MGP_BALBcJ_T0047523.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466747 35471850 - protein_coding retained_intron MGP_BALBcJ_T0047524.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466747 35471850 - MGP_BALBcJ_P0047524 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047525.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466747 35471850 - MGP_BALBcJ_P0047525 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047526.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466759 35471850 - MGP_BALBcJ_P0047526 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047527.1 MGP_BALBcJ_G0023634.1 mouse_genomes_project 17 35466759 35471850 - MGP_BALBcJ_P0047527 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011409.1 MGP_BALBcJ_G0009534.1 mouse_genomes_project 17 48602707 48602965 - Gm23642 misc_RNA misc_RNA MGP_BALBcJ_T0045968.1 MGP_BALBcJ_G0023287.1 mouse_genomes_project 17 23320355 23326036 + MGP_BALBcJ_P0045968 Hs3st6 protein_coding protein_coding MGP_BALBcJ_T0048199.1 MGP_BALBcJ_G0023879.1 mouse_genomes_project 17 56100653 56132421 - MGP_BALBcJ_P0048199 Dpp9 protein_coding unknown_likely_coding MGP_BALBcJ_T0047687.1 MGP_BALBcJ_G0023718.1 mouse_genomes_project 17 40307176 40331240 + MGP_BALBcJ_P0047687 Gm44501 protein_coding protein_coding MGP_BALBcJ_T0045867.1 MGP_BALBcJ_G0023259.1 mouse_genomes_project 17 22754112 22782458 - MGP_BALBcJ_P0045867 Ccnf protein_coding protein_coding MGP_BALBcJ_T0048502.1 MGP_BALBcJ_G0023980.1 mouse_genomes_project 17 73969952 73998128 + MGP_BALBcJ_P0048502 Ehd3 protein_coding protein_coding MGP_BALBcJ_T0045735.1 MGP_BALBcJ_G0023222.1 mouse_genomes_project 17 22046988 22058989 - MGP_BALBcJ_P0045735 Zfp13 protein_coding protein_coding MGP_BALBcJ_T0045736.1 MGP_BALBcJ_G0023222.1 mouse_genomes_project 17 22046995 22075089 - MGP_BALBcJ_P0045736 Zfp13 protein_coding protein_coding MGP_BALBcJ_T0006867.1 MGP_BALBcJ_G0005653.1 mouse_genomes_project 17 2845615 2849786 + 3300005D01Rik lincRNA lincRNA MGP_BALBcJ_T0006868.1 MGP_BALBcJ_G0005653.1 mouse_genomes_project 17 2845657 2849941 + 3300005D01Rik lincRNA lincRNA MGP_BALBcJ_T0006869.1 MGP_BALBcJ_G0005653.1 mouse_genomes_project 17 2846449 2850133 + 3300005D01Rik lincRNA lincRNA MGP_BALBcJ_T0006870.1 MGP_BALBcJ_G0005653.1 mouse_genomes_project 17 2846610 2849787 + 3300005D01Rik lincRNA lincRNA MGP_BALBcJ_T0011411.1 MGP_BALBcJ_G0009536.1 mouse_genomes_project 17 67658258 67658535 + Gm22277 misc_RNA misc_RNA MGP_BALBcJ_T0010205.1 MGP_BALBcJ_G0008330.1 mouse_genomes_project 17 70964359 70964457 - Mir1195 miRNA miRNA MGP_BALBcJ_T0046656.1 MGP_BALBcJ_G0023448.1 mouse_genomes_project 17 30044803 30079328 + MGP_BALBcJ_P0046656 Ubash3a protein_coding protein_coding MGP_BALBcJ_T0046657.1 MGP_BALBcJ_G0023448.1 mouse_genomes_project 17 30045010 30053399 + MGP_BALBcJ_P0046657 Ubash3a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046658.1 MGP_BALBcJ_G0023448.1 mouse_genomes_project 17 30045019 30051133 + MGP_BALBcJ_P0046658 Ubash3a protein_coding protein_coding MGP_BALBcJ_T0046659.1 MGP_BALBcJ_G0023448.1 mouse_genomes_project 17 30048758 30079328 + Ubash3a protein_coding processed_transcript MGP_BALBcJ_T0046660.1 MGP_BALBcJ_G0023448.1 mouse_genomes_project 17 30048942 30055150 + Ubash3a protein_coding processed_transcript MGP_BALBcJ_T0046736.1 MGP_BALBcJ_G0023464.1 mouse_genomes_project 17 31188622 31217763 - MGP_BALBcJ_P0046736 Akap8l protein_coding protein_coding MGP_BALBcJ_T0048662.1 MGP_BALBcJ_G0024046.1 mouse_genomes_project 17 85309870 85336593 - MGP_BALBcJ_P0048662 Prepl protein_coding protein_coding MGP_BALBcJ_T0048663.1 MGP_BALBcJ_G0024046.1 mouse_genomes_project 17 85309870 85336593 - MGP_BALBcJ_P0048663 Prepl protein_coding protein_coding MGP_BALBcJ_T0102292.1 MGP_BALBcJ_G0040108.1 mouse_genomes_project 17 18516691 18517295 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045969.1 MGP_BALBcJ_G0023288.1 mouse_genomes_project 17 23368369 23402781 + MGP_BALBcJ_P0045969 Meiob protein_coding protein_coding MGP_BALBcJ_T0047015.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33186866 33196769 + MGP_BALBcJ_P0047015 Tap1 protein_coding protein_coding MGP_BALBcJ_T0047016.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33187041 33191844 + Tap1 protein_coding retained_intron MGP_BALBcJ_T0047017.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33187047 33196769 + Tap1 protein_coding retained_intron MGP_BALBcJ_T0047018.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33187115 33196763 + MGP_BALBcJ_P0047018 Tap1 protein_coding protein_coding MGP_BALBcJ_T0047019.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33189459 33196764 + Tap1 protein_coding retained_intron MGP_BALBcJ_T0047020.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33190319 33193124 + MGP_BALBcJ_P0047020 Tap1 protein_coding protein_coding MGP_BALBcJ_T0047021.1 MGP_BALBcJ_G0023528.1 mouse_genomes_project 17 33192609 33196131 + Tap1 protein_coding retained_intron MGP_BALBcJ_T0101650.1 MGP_BALBcJ_G0039650.1 mouse_genomes_project 17 53625865 53677870 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0048486.1 MGP_BALBcJ_G0023972.1 mouse_genomes_project 17 71896604 71905951 - MGP_BALBcJ_P0048486 BC027072 protein_coding protein_coding MGP_BALBcJ_T0047583.1 MGP_BALBcJ_G0023655.1 mouse_genomes_project 17 36380666 36390664 + MGP_BALBcJ_P0047583 Znrd1as protein_coding protein_coding MGP_BALBcJ_T0047584.1 MGP_BALBcJ_G0023655.1 mouse_genomes_project 17 36380693 36389953 + Znrd1as protein_coding retained_intron MGP_BALBcJ_T0047585.1 MGP_BALBcJ_G0023655.1 mouse_genomes_project 17 36380715 36390663 + MGP_BALBcJ_P0047585 Znrd1as protein_coding protein_coding MGP_BALBcJ_T0047588.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36409804 36415290 - H2-M5 protein_coding retained_intron MGP_BALBcJ_T0047589.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36410826 36414717 - MGP_BALBcJ_P0047589 H2-M5 protein_coding unknown_likely_coding MGP_BALBcJ_T0047590.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36410826 36414927 - MGP_BALBcJ_P0047590 H2-M5 protein_coding unknown_likely_coding MGP_BALBcJ_T0047591.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36412609 36415257 - MGP_BALBcJ_P0047591 H2-M5 protein_coding protein_coding MGP_BALBcJ_T0047592.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36412869 36414943 - MGP_BALBcJ_P0047592 H2-M5 protein_coding protein_coding MGP_BALBcJ_T0047593.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36412869 36414943 - MGP_BALBcJ_P0047593 H2-M5 protein_coding protein_coding MGP_BALBcJ_T0047594.1 MGP_BALBcJ_G0023657.1 mouse_genomes_project 17 36413251 36414800 - MGP_BALBcJ_P0047594 H2-M5 protein_coding protein_coding MGP_BALBcJ_T0047335.1 MGP_BALBcJ_G0023595.1 mouse_genomes_project 17 34317768 34319917 - MGP_BALBcJ_P0047335 Lta protein_coding protein_coding MGP_BALBcJ_T0006881.1 MGP_BALBcJ_G0005663.1 mouse_genomes_project 17 14508017 14537984 + lincRNA lincRNA MGP_BALBcJ_T0006882.1 MGP_BALBcJ_G0005663.1 mouse_genomes_project 17 14536736 14537597 + lincRNA lincRNA MGP_BALBcJ_T0045659.1 MGP_BALBcJ_G0023177.1 mouse_genomes_project 17 18677167 18701458 - MGP_BALBcJ_P0045659 protein_coding protein_coding MGP_BALBcJ_T0048272.1 MGP_BALBcJ_G0023905.1 mouse_genomes_project 17 56959116 56961089 + MGP_BALBcJ_P0048272 Alkbh7 protein_coding protein_coding MGP_BALBcJ_T0048273.1 MGP_BALBcJ_G0023905.1 mouse_genomes_project 17 56959120 56961100 + MGP_BALBcJ_P0048273 Alkbh7 protein_coding protein_coding MGP_BALBcJ_T0048274.1 MGP_BALBcJ_G0023905.1 mouse_genomes_project 17 56960257 56960915 + Alkbh7 protein_coding retained_intron MGP_BALBcJ_T0102352.1 MGP_BALBcJ_G0040168.1 mouse_genomes_project 17 36729542 36730470 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006952.1 MGP_BALBcJ_G0005716.1 mouse_genomes_project 17 69519149 69523380 + C030034I22Rik lincRNA lincRNA MGP_BALBcJ_T0006953.1 MGP_BALBcJ_G0005716.1 mouse_genomes_project 17 69519208 69520679 + C030034I22Rik lincRNA lincRNA MGP_BALBcJ_T0006896.1 MGP_BALBcJ_G0005675.1 mouse_genomes_project 17 25888254 25890294 + Gm26724 lincRNA lincRNA MGP_BALBcJ_T0046643.1 MGP_BALBcJ_G0023440.1 mouse_genomes_project 17 29444635 29702581 + MGP_BALBcJ_P0046643 Dnah8 protein_coding protein_coding MGP_BALBcJ_T0046664.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226358 30317621 + MGP_BALBcJ_P0046664 Pde9a protein_coding protein_coding MGP_BALBcJ_T0046665.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226373 30317467 + MGP_BALBcJ_P0046665 Pde9a protein_coding protein_coding MGP_BALBcJ_T0046666.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226373 30317467 + MGP_BALBcJ_P0046666 Pde9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046667.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226373 30317467 + MGP_BALBcJ_P0046667 Pde9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046668.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226378 30317470 + MGP_BALBcJ_P0046668 Pde9a protein_coding protein_coding MGP_BALBcJ_T0046669.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226386 30317392 + MGP_BALBcJ_P0046669 Pde9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046670.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226398 30317470 + MGP_BALBcJ_P0046670 Pde9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046671.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226400 30313126 + Pde9a protein_coding retained_intron MGP_BALBcJ_T0046672.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30226418 30296157 + MGP_BALBcJ_P0046672 Pde9a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046673.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30274154 30300168 + MGP_BALBcJ_P0046673 Pde9a protein_coding protein_coding MGP_BALBcJ_T0046674.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30283999 30301230 + Pde9a protein_coding retained_intron MGP_BALBcJ_T0046675.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30294366 30302740 + Pde9a protein_coding retained_intron MGP_BALBcJ_T0046676.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30302667 30317452 + MGP_BALBcJ_P0046676 Pde9a protein_coding protein_coding MGP_BALBcJ_T0046677.1 MGP_BALBcJ_G0023451.1 mouse_genomes_project 17 30312371 30317417 + Pde9a protein_coding processed_transcript MGP_BALBcJ_T0099569.1 MGP_BALBcJ_G0037605.1 mouse_genomes_project 17 40708104 40708252 - Gm23078 snRNA snRNA MGP_BALBcJ_T0003734.1 MGP_BALBcJ_G0003360.1 mouse_genomes_project 17 33207286 33212285 - antisense antisense MGP_BALBcJ_T0013280.1 MGP_BALBcJ_G0011377.1 mouse_genomes_project 17 92900359 92902338 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048341.1 MGP_BALBcJ_G0023937.1 mouse_genomes_project 17 65685230 65689845 - MGP_BALBcJ_P0048341 Txndc2 protein_coding protein_coding MGP_BALBcJ_T0100825.1 MGP_BALBcJ_G0038861.1 mouse_genomes_project 17 10203906 10204044 + Gm26130 snoRNA snoRNA MGP_BALBcJ_T0047186.1 MGP_BALBcJ_G0023563.1 mouse_genomes_project 17 33980095 33995844 + MGP_BALBcJ_P0047186 Zbtb12 protein_coding protein_coding MGP_BALBcJ_T0047189.1 MGP_BALBcJ_G0023563.1 mouse_genomes_project 17 33995096 33997266 + MGP_BALBcJ_P0047189 Zbtb12 protein_coding protein_coding MGP_BALBcJ_T0045929.1 MGP_BALBcJ_G0023273.1 mouse_genomes_project 17 23140755 23177288 - MGP_BALBcJ_P0045929 Tsc2 protein_coding protein_coding MGP_BALBcJ_T0045930.1 MGP_BALBcJ_G0023273.1 mouse_genomes_project 17 23141423 23177256 - MGP_BALBcJ_P0045930 Tsc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0047652.1 MGP_BALBcJ_G0023688.1 mouse_genomes_project 17 37137059 37198126 + MGP_BALBcJ_P0047652 protein_coding protein_coding MGP_BALBcJ_T0013246.1 MGP_BALBcJ_G0011343.1 mouse_genomes_project 17 53247849 53248443 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045410.1 MGP_BALBcJ_G0023090.1 mouse_genomes_project 17 4261935 4288227 + MGP_BALBcJ_P0045410 protein_coding protein_coding MGP_BALBcJ_T0047507.1 MGP_BALBcJ_G0023625.1 mouse_genomes_project 17 35213837 35222523 + MGP_BALBcJ_P0047507 Gnl1 protein_coding protein_coding MGP_BALBcJ_T0047508.1 MGP_BALBcJ_G0023625.1 mouse_genomes_project 17 35213847 35214603 + Gnl1 protein_coding retained_intron MGP_BALBcJ_T0047812.1 MGP_BALBcJ_G0023760.1 mouse_genomes_project 17 45475656 45488421 + MGP_BALBcJ_P0047812 Mrpl14 protein_coding protein_coding MGP_BALBcJ_T0047813.1 MGP_BALBcJ_G0023760.1 mouse_genomes_project 17 45475691 45488103 + Mrpl14 protein_coding processed_transcript MGP_BALBcJ_T0047814.1 MGP_BALBcJ_G0023760.1 mouse_genomes_project 17 45485342 45488325 + Mrpl14 protein_coding processed_transcript MGP_BALBcJ_T0013248.1 MGP_BALBcJ_G0011345.1 mouse_genomes_project 17 53395616 53396383 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048401.1 MGP_BALBcJ_G0023954.1 mouse_genomes_project 17 68942436 68948478 + MGP_BALBcJ_P0048401 Tmem200c protein_coding protein_coding MGP_BALBcJ_T0045362.1 MGP_BALBcJ_G0023075.1 mouse_genomes_project 17 2035422 2139610 + Arid1b protein_coding processed_transcript MGP_BALBcJ_T0045363.1 MGP_BALBcJ_G0023075.1 mouse_genomes_project 17 2036120 2384615 + MGP_BALBcJ_P0045363 Arid1b protein_coding protein_coding MGP_BALBcJ_T0045364.1 MGP_BALBcJ_G0023075.1 mouse_genomes_project 17 2036276 2385632 + MGP_BALBcJ_P0045364 Arid1b protein_coding protein_coding MGP_BALBcJ_T0045365.1 MGP_BALBcJ_G0023075.1 mouse_genomes_project 17 2037610 2140063 + Arid1b protein_coding retained_intron MGP_BALBcJ_T0045366.1 MGP_BALBcJ_G0023075.1 mouse_genomes_project 17 2082387 2169511 + Arid1b protein_coding retained_intron MGP_BALBcJ_T0101874.1 MGP_BALBcJ_G0039780.1 mouse_genomes_project 17 95122870 95149755 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101875.1 MGP_BALBcJ_G0039780.1 mouse_genomes_project 17 95122882 95129598 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101876.1 MGP_BALBcJ_G0039780.1 mouse_genomes_project 17 95122908 95149758 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101877.1 MGP_BALBcJ_G0039780.1 mouse_genomes_project 17 95125265 95149652 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0047700.1 MGP_BALBcJ_G0023727.1 mouse_genomes_project 17 40726420 40756573 + MGP_BALBcJ_P0047700 Mut protein_coding protein_coding MGP_BALBcJ_T0045557.1 MGP_BALBcJ_G0023132.1 mouse_genomes_project 17 11744848 11875805 + MGP_BALBcJ_P0045557 Smoc2 protein_coding protein_coding MGP_BALBcJ_T0048357.1 MGP_BALBcJ_G0023941.1 mouse_genomes_project 17 66000027 66031185 - MGP_BALBcJ_P0048357 Twsg1 protein_coding protein_coding MGP_BALBcJ_T0006915.1 MGP_BALBcJ_G0005689.1 mouse_genomes_project 17 32707821 32710197 - 4931413I07Rik lincRNA lincRNA MGP_BALBcJ_T0048551.1 MGP_BALBcJ_G0023996.1 mouse_genomes_project 17 78565858 78606341 - MGP_BALBcJ_P0048551 Fez2 protein_coding protein_coding MGP_BALBcJ_T0048552.1 MGP_BALBcJ_G0023996.1 mouse_genomes_project 17 78565858 78606341 - MGP_BALBcJ_P0048552 Fez2 protein_coding protein_coding MGP_BALBcJ_T0047414.1 MGP_BALBcJ_G0023612.1 mouse_genomes_project 17 35045547 35046787 + MGP_BALBcJ_P0047414 Ier3 protein_coding protein_coding MGP_BALBcJ_T0048719.1 MGP_BALBcJ_G0024067.1 mouse_genomes_project 17 88254928 88255345 + MGP_BALBcJ_P0048719 Rpl36-ps4 protein_coding protein_coding MGP_BALBcJ_T0046788.1 MGP_BALBcJ_G0023478.1 mouse_genomes_project 17 31802215 31814524 - MGP_BALBcJ_P0046788 Cyp4f14 protein_coding unknown_likely_coding MGP_BALBcJ_T0003696.1 MGP_BALBcJ_G0003335.1 mouse_genomes_project 17 8356597 8363805 - Gm28505 antisense antisense MGP_BALBcJ_T0045791.1 MGP_BALBcJ_G0023239.1 mouse_genomes_project 17 22313363 22315747 - MGP_BALBcJ_P0045791 Prss33 protein_coding protein_coding MGP_BALBcJ_T0045792.1 MGP_BALBcJ_G0023239.1 mouse_genomes_project 17 22313743 22315743 - MGP_BALBcJ_P0045792 Prss33 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045793.1 MGP_BALBcJ_G0023239.1 mouse_genomes_project 17 22314671 22316060 - Prss33 protein_coding retained_intron MGP_BALBcJ_T0045449.1 MGP_BALBcJ_G0023103.1 mouse_genomes_project 17 5729798 5737873 + MGP_BALBcJ_P0045449 T protein_coding protein_coding MGP_BALBcJ_T0045450.1 MGP_BALBcJ_G0023103.1 mouse_genomes_project 17 5730300 5732369 + MGP_BALBcJ_P0045450 T protein_coding protein_coding MGP_BALBcJ_T0045451.1 MGP_BALBcJ_G0023103.1 mouse_genomes_project 17 5730786 5737119 + MGP_BALBcJ_P0045451 T protein_coding protein_coding MGP_BALBcJ_T0013259.1 MGP_BALBcJ_G0011356.1 mouse_genomes_project 17 54323227 54323368 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100850.1 MGP_BALBcJ_G0038886.1 mouse_genomes_project 17 82465628 82465757 - Gm22386 snoRNA snoRNA MGP_BALBcJ_T0045806.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469045 22473734 + MGP_BALBcJ_P0045806 Sbp protein_coding protein_coding MGP_BALBcJ_T0045807.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469206 22473738 + MGP_BALBcJ_P0045807 Sbp protein_coding protein_coding MGP_BALBcJ_T0045808.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469277 22473734 + MGP_BALBcJ_P0045808 Sbp protein_coding protein_coding MGP_BALBcJ_T0045809.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469345 22472771 + MGP_BALBcJ_P0045809 Sbp protein_coding protein_coding MGP_BALBcJ_T0045810.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469437 22473730 + MGP_BALBcJ_P0045810 Sbp protein_coding protein_coding MGP_BALBcJ_T0045811.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469735 22473738 + MGP_BALBcJ_P0045811 Sbp protein_coding protein_coding MGP_BALBcJ_T0045812.1 MGP_BALBcJ_G0023246.1 mouse_genomes_project 17 22469743 22473734 + MGP_BALBcJ_P0045812 Sbp protein_coding protein_coding MGP_BALBcJ_T0048340.1 MGP_BALBcJ_G0023936.1 mouse_genomes_project 17 65626495 65659959 - MGP_BALBcJ_P0048340 Vapa protein_coding protein_coding MGP_BALBcJ_T0047171.1 MGP_BALBcJ_G0023560.1 mouse_genomes_project 17 33956893 33959544 - MGP_BALBcJ_P0047171 Cfb protein_coding protein_coding MGP_BALBcJ_T0047172.1 MGP_BALBcJ_G0023560.1 mouse_genomes_project 17 33956903 33963033 - MGP_BALBcJ_P0047172 Cfb protein_coding protein_coding MGP_BALBcJ_T0047173.1 MGP_BALBcJ_G0023560.1 mouse_genomes_project 17 33956910 33958661 - MGP_BALBcJ_P0047173 Cfb protein_coding protein_coding MGP_BALBcJ_T0047174.1 MGP_BALBcJ_G0023560.1 mouse_genomes_project 17 33956931 33959829 - MGP_BALBcJ_P0047174 Cfb protein_coding protein_coding MGP_BALBcJ_T0047177.1 MGP_BALBcJ_G0023560.1 mouse_genomes_project 17 33956946 33962625 - MGP_BALBcJ_P0047177 Cfb protein_coding protein_coding MGP_BALBcJ_T0047179.1 MGP_BALBcJ_G0023560.1 mouse_genomes_project 17 33957093 33959560 - MGP_BALBcJ_P0047179 Cfb protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102345.1 MGP_BALBcJ_G0040161.1 mouse_genomes_project 17 36075698 36075746 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046244.1 MGP_BALBcJ_G0023351.1 mouse_genomes_project 17 24596414 24629387 - MGP_BALBcJ_P0046244 Rab11fip3 protein_coding protein_coding MGP_BALBcJ_T0046245.1 MGP_BALBcJ_G0023351.1 mouse_genomes_project 17 24596414 24677738 - MGP_BALBcJ_P0046245 Rab11fip3 protein_coding protein_coding MGP_BALBcJ_T0046246.1 MGP_BALBcJ_G0023351.1 mouse_genomes_project 17 24596423 24677970 - MGP_BALBcJ_P0046246 Rab11fip3 protein_coding protein_coding MGP_BALBcJ_T0046247.1 MGP_BALBcJ_G0023351.1 mouse_genomes_project 17 24611128 24629345 - Rab11fip3 protein_coding retained_intron MGP_BALBcJ_T0046248.1 MGP_BALBcJ_G0023351.1 mouse_genomes_project 17 24621366 24625982 - MGP_BALBcJ_P0046248 Rab11fip3 protein_coding protein_coding MGP_BALBcJ_T0046249.1 MGP_BALBcJ_G0023351.1 mouse_genomes_project 17 24644265 24677796 - Rab11fip3 protein_coding processed_transcript MGP_BALBcJ_T0046600.1 MGP_BALBcJ_G0023429.1 mouse_genomes_project 17 28324110 28324620 - MGP_BALBcJ_P0046600 Gm17657 protein_coding protein_coding MGP_BALBcJ_T0011402.1 MGP_BALBcJ_G0009527.1 mouse_genomes_project 17 31853512 31853787 - Gm25667 misc_RNA misc_RNA MGP_BALBcJ_T0003767.1 MGP_BALBcJ_G0003386.1 mouse_genomes_project 17 64793589 64798844 - Gm17133 antisense antisense MGP_BALBcJ_T0048120.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51666569 51762613 - MGP_BALBcJ_P0048120 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048121.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51666570 51756549 - MGP_BALBcJ_P0048121 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048122.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51669276 51763211 - MGP_BALBcJ_P0048122 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048123.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51669835 51740900 - MGP_BALBcJ_P0048123 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048124.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51669838 51756527 - MGP_BALBcJ_P0048124 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048125.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51669854 51744985 - MGP_BALBcJ_P0048125 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048126.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51669859 51742661 - MGP_BALBcJ_P0048126 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048127.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51670371 51672650 - Satb1 protein_coding retained_intron MGP_BALBcJ_T0048128.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51732310 51739113 - Satb1 protein_coding processed_transcript MGP_BALBcJ_T0048129.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51734346 51751072 - MGP_BALBcJ_P0048129 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048130.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51735343 51761960 - MGP_BALBcJ_P0048130 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048131.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51737060 51740900 - Satb1 protein_coding retained_intron MGP_BALBcJ_T0048132.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51739169 51756549 - MGP_BALBcJ_P0048132 Satb1 protein_coding protein_coding MGP_BALBcJ_T0048133.1 MGP_BALBcJ_G0023846.1 mouse_genomes_project 17 51754609 51759458 - Satb1 protein_coding retained_intron MGP_BALBcJ_T0099577.1 MGP_BALBcJ_G0037613.1 mouse_genomes_project 17 57690904 57691016 + Gm25102 snRNA snRNA MGP_BALBcJ_T0046376.1 MGP_BALBcJ_G0023384.1 mouse_genomes_project 17 26293935 26300632 + MGP_BALBcJ_P0046376 protein_coding protein_coding MGP_BALBcJ_T0046377.1 MGP_BALBcJ_G0023384.1 mouse_genomes_project 17 26299887 26300007 + MGP_BALBcJ_P0046377 protein_coding protein_coding MGP_BALBcJ_T0100847.1 MGP_BALBcJ_G0038883.1 mouse_genomes_project 17 71794987 71795063 + Gm22858 snoRNA snoRNA MGP_BALBcJ_T0047207.1 MGP_BALBcJ_G0023566.1 mouse_genomes_project 17 34033226 34037895 + MGP_BALBcJ_P0047207 Neu1 protein_coding protein_coding MGP_BALBcJ_T0047208.1 MGP_BALBcJ_G0023566.1 mouse_genomes_project 17 34033287 34037921 + Neu1 protein_coding retained_intron MGP_BALBcJ_T0047209.1 MGP_BALBcJ_G0023566.1 mouse_genomes_project 17 34033836 34034739 + Neu1 protein_coding retained_intron MGP_BALBcJ_T0047885.1 MGP_BALBcJ_G0023775.1 mouse_genomes_project 17 46201150 46232333 + MGP_BALBcJ_P0047885 Zfp318 protein_coding protein_coding MGP_BALBcJ_T0047886.1 MGP_BALBcJ_G0023775.1 mouse_genomes_project 17 46201170 46238418 + MGP_BALBcJ_P0047886 Zfp318 protein_coding protein_coding MGP_BALBcJ_T0047887.1 MGP_BALBcJ_G0023775.1 mouse_genomes_project 17 46217582 46228236 + MGP_BALBcJ_P0047887 Zfp318 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047888.1 MGP_BALBcJ_G0023775.1 mouse_genomes_project 17 46223385 46226879 + Zfp318 protein_coding retained_intron MGP_BALBcJ_T0047889.1 MGP_BALBcJ_G0023775.1 mouse_genomes_project 17 46227146 46228839 + Zfp318 protein_coding retained_intron MGP_BALBcJ_T0046311.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25209471 25305432 + MGP_BALBcJ_P0046311 Ergic1 protein_coding protein_coding MGP_BALBcJ_T0046312.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25209500 25216999 + Ergic1 protein_coding processed_transcript MGP_BALBcJ_T0046313.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25209527 25303675 + Ergic1 protein_coding processed_transcript MGP_BALBcJ_T0046314.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25262691 25283075 + MGP_BALBcJ_P0046314 Ergic1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046315.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25270094 25303675 + Ergic1 protein_coding processed_transcript MGP_BALBcJ_T0046316.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25272816 25292506 + Ergic1 protein_coding retained_intron MGP_BALBcJ_T0046317.1 MGP_BALBcJ_G0023367.1 mouse_genomes_project 17 25287370 25303853 + MGP_BALBcJ_P0046317 Ergic1 protein_coding protein_coding MGP_BALBcJ_T0048189.1 MGP_BALBcJ_G0023874.1 mouse_genomes_project 17 56025038 56031034 - MGP_BALBcJ_P0048189 Plin5 protein_coding protein_coding MGP_BALBcJ_T0048190.1 MGP_BALBcJ_G0023874.1 mouse_genomes_project 17 56025044 56030736 - MGP_BALBcJ_P0048190 Plin5 protein_coding protein_coding MGP_BALBcJ_T0048191.1 MGP_BALBcJ_G0023874.1 mouse_genomes_project 17 56025466 56031036 - MGP_BALBcJ_P0048191 Plin5 protein_coding unknown_likely_coding MGP_BALBcJ_T0048505.1 MGP_BALBcJ_G0023983.1 mouse_genomes_project 17 74368447 74383895 + MGP_BALBcJ_P0048505 Fbxo34 protein_coding protein_coding MGP_BALBcJ_T0102299.1 MGP_BALBcJ_G0040115.1 mouse_genomes_project 17 19502986 19503722 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102344.1 MGP_BALBcJ_G0040160.1 mouse_genomes_project 17 36067564 36068690 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003707.1 MGP_BALBcJ_G0003341.1 mouse_genomes_project 17 23071648 23072148 + Rab26os antisense antisense MGP_BALBcJ_T0003708.1 MGP_BALBcJ_G0003341.1 mouse_genomes_project 17 23071667 23072147 + Rab26os antisense antisense MGP_BALBcJ_T0010188.1 MGP_BALBcJ_G0008313.1 mouse_genomes_project 17 34370209 34370326 + Mir8094 miRNA miRNA MGP_BALBcJ_T0047703.1 MGP_BALBcJ_G0023730.1 mouse_genomes_project 17 42434031 42471776 - MGP_BALBcJ_P0047703 Adgrf4 protein_coding protein_coding MGP_BALBcJ_T0047704.1 MGP_BALBcJ_G0023730.1 mouse_genomes_project 17 42434034 42471776 - MGP_BALBcJ_P0047704 Adgrf4 protein_coding protein_coding MGP_BALBcJ_T0047705.1 MGP_BALBcJ_G0023730.1 mouse_genomes_project 17 42434231 42471754 - MGP_BALBcJ_P0047705 Adgrf4 protein_coding protein_coding MGP_BALBcJ_T0047706.1 MGP_BALBcJ_G0023730.1 mouse_genomes_project 17 42451045 42471765 - MGP_BALBcJ_P0047706 Adgrf4 protein_coding protein_coding MGP_BALBcJ_T0048179.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55978704 55986688 - MGP_BALBcJ_P0048179 Ubxn6 protein_coding protein_coding MGP_BALBcJ_T0048180.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55979909 55986677 - Ubxn6 protein_coding retained_intron MGP_BALBcJ_T0048181.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55979909 55983892 - Ubxn6 protein_coding retained_intron MGP_BALBcJ_T0048182.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55980195 55981094 - Ubxn6 protein_coding retained_intron MGP_BALBcJ_T0048183.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55981297 55984100 - Ubxn6 protein_coding processed_transcript MGP_BALBcJ_T0048184.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55981777 55986508 - Ubxn6 protein_coding retained_intron MGP_BALBcJ_T0048185.1 MGP_BALBcJ_G0023871.1 mouse_genomes_project 17 55982303 55986207 - MGP_BALBcJ_P0048185 Ubxn6 protein_coding protein_coding MGP_BALBcJ_T0013239.1 MGP_BALBcJ_G0011336.1 mouse_genomes_project 17 37990459 37991140 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010168.1 MGP_BALBcJ_G0008293.1 mouse_genomes_project 17 25778539 25778606 + Mir7677 miRNA miRNA MGP_BALBcJ_T0098747.1 MGP_BALBcJ_G0036801.1 mouse_genomes_project 17 4319479 4319567 - Gm22416 scaRNA scaRNA MGP_BALBcJ_T0046797.1 MGP_BALBcJ_G0023481.1 mouse_genomes_project 17 31895454 31901006 + Zfp952 protein_coding processed_transcript MGP_BALBcJ_T0046798.1 MGP_BALBcJ_G0023481.1 mouse_genomes_project 17 31895522 31908881 + Zfp952 protein_coding processed_transcript MGP_BALBcJ_T0046799.1 MGP_BALBcJ_G0023481.1 mouse_genomes_project 17 31895522 31908881 + MGP_BALBcJ_P0046799 Zfp952 protein_coding protein_coding MGP_BALBcJ_T0046800.1 MGP_BALBcJ_G0023481.1 mouse_genomes_project 17 31895526 31906510 + MGP_BALBcJ_P0046800 Zfp952 protein_coding protein_coding MGP_BALBcJ_T0000979.1 MGP_BALBcJ_G0000907.1 mouse_genomes_project 17 50137966 50138983 + TEC TEC MGP_BALBcJ_T0045954.1 MGP_BALBcJ_G0023283.1 mouse_genomes_project 17 23278140 23284080 + MGP_BALBcJ_P0045954 Rps2 protein_coding protein_coding MGP_BALBcJ_T0045955.1 MGP_BALBcJ_G0023283.1 mouse_genomes_project 17 23283384 23284076 + Rps2 protein_coding retained_intron MGP_BALBcJ_T0017519.1 MGP_BALBcJ_G0015280.1 mouse_genomes_project 17 24166034 24170261 + 2810468N07Rik processed_transcript processed_transcript MGP_BALBcJ_T0013200.1 MGP_BALBcJ_G0011297.1 mouse_genomes_project 17 26252087 26261607 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048164.1 MGP_BALBcJ_G0023865.1 mouse_genomes_project 17 55875922 55882072 + MGP_BALBcJ_P0048164 Shd protein_coding protein_coding MGP_BALBcJ_T0048165.1 MGP_BALBcJ_G0023865.1 mouse_genomes_project 17 55875966 55882084 + MGP_BALBcJ_P0048165 Shd protein_coding unknown_likely_coding MGP_BALBcJ_T0102278.1 MGP_BALBcJ_G0040094.1 mouse_genomes_project 17 16397708 16412617 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099562.1 MGP_BALBcJ_G0037598.1 mouse_genomes_project 17 29602950 29603054 - Gm24661 snRNA snRNA MGP_BALBcJ_T0046197.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24445741 24462346 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046198.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24445741 24462438 - MGP_BALBcJ_P0046198 Wdr90 protein_coding protein_coding MGP_BALBcJ_T0046199.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24445743 24462431 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046200.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24446038 24462464 - MGP_BALBcJ_P0046200 Wdr90 protein_coding protein_coding MGP_BALBcJ_T0046201.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24446358 24447465 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046202.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24449539 24452731 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046203.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24450923 24452838 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046204.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24452881 24454861 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046205.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24454305 24462438 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046206.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24454795 24456265 - Wdr90 protein_coding retained_intron MGP_BALBcJ_T0046207.1 MGP_BALBcJ_G0023341.1 mouse_genomes_project 17 24456749 24460189 - MGP_BALBcJ_P0046207 Wdr90 protein_coding protein_coding MGP_BALBcJ_T0047096.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33650017 33657483 + MGP_BALBcJ_P0047096 Agpat1 protein_coding protein_coding MGP_BALBcJ_T0047097.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33650599 33657182 + MGP_BALBcJ_P0047097 Agpat1 protein_coding protein_coding MGP_BALBcJ_T0047098.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33651644 33659220 + MGP_BALBcJ_P0047098 Agpat1 protein_coding protein_coding MGP_BALBcJ_T0047099.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33651644 33658217 + MGP_BALBcJ_P0047099 Agpat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047100.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33651756 33658665 + MGP_BALBcJ_P0047100 Agpat1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047101.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33654797 33659219 + MGP_BALBcJ_P0047101 Agpat1 protein_coding protein_coding MGP_BALBcJ_T0047102.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33655390 33659189 + MGP_BALBcJ_P0047102 Agpat1 protein_coding protein_coding MGP_BALBcJ_T0047103.1 MGP_BALBcJ_G0023547.1 mouse_genomes_project 17 33656045 33656963 + Agpat1 protein_coding retained_intron MGP_BALBcJ_T0010175.1 MGP_BALBcJ_G0008300.1 mouse_genomes_project 17 28401294 28401357 + Mir7667 miRNA miRNA MGP_BALBcJ_T0047653.1 MGP_BALBcJ_G0023689.1 mouse_genomes_project 17 37137062 37173663 + MGP_BALBcJ_P0047653 protein_coding protein_coding MGP_BALBcJ_T0006933.1 MGP_BALBcJ_G0005706.1 mouse_genomes_project 17 46294432 46662310 + lincRNA lincRNA MGP_BALBcJ_T0047516.1 MGP_BALBcJ_G0023629.1 mouse_genomes_project 17 35284716 35305630 + MGP_BALBcJ_P0047516 protein_coding protein_coding MGP_BALBcJ_T0047046.1 MGP_BALBcJ_G0023538.1 mouse_genomes_project 17 33379612 33388143 + MGP_BALBcJ_P0047046 Btnl1 protein_coding protein_coding MGP_BALBcJ_T0017520.1 MGP_BALBcJ_G0015281.1 mouse_genomes_project 17 24521732 24541117 + Gm16278 processed_transcript processed_transcript MGP_BALBcJ_T0045629.1 MGP_BALBcJ_G0023150.1 mouse_genomes_project 17 15440405 15452276 - MGP_BALBcJ_P0045629 Has1 protein_coding protein_coding MGP_BALBcJ_T0047659.1 MGP_BALBcJ_G0023695.1 mouse_genomes_project 17 37337750 37338857 + MGP_BALBcJ_P0047659 protein_coding protein_coding MGP_BALBcJ_T0047669.1 MGP_BALBcJ_G0023703.1 mouse_genomes_project 17 37678696 37679635 + MGP_BALBcJ_P0047669 Olfr134 protein_coding protein_coding MGP_BALBcJ_T0046778.1 MGP_BALBcJ_G0023474.1 mouse_genomes_project 17 31665331 31684551 - MGP_BALBcJ_P0046778 Zfp871 protein_coding protein_coding MGP_BALBcJ_T0046779.1 MGP_BALBcJ_G0023474.1 mouse_genomes_project 17 31671551 31684661 - Zfp871 protein_coding processed_transcript MGP_BALBcJ_T0045414.1 MGP_BALBcJ_G0023094.1 mouse_genomes_project 17 4669135 4670928 - MGP_BALBcJ_P0045414 Ttll2 protein_coding protein_coding MGP_BALBcJ_T0017526.1 MGP_BALBcJ_G0015287.1 mouse_genomes_project 17 33660254 33672764 - Gm20460 processed_transcript processed_transcript MGP_BALBcJ_T0013251.1 MGP_BALBcJ_G0011348.1 mouse_genomes_project 17 53626088 53677781 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048609.1 MGP_BALBcJ_G0024024.1 mouse_genomes_project 17 80763702 80806114 - MGP_BALBcJ_P0048609 Cdkl4 protein_coding protein_coding MGP_BALBcJ_T0045503.1 MGP_BALBcJ_G0023120.1 mouse_genomes_project 17 10169107 10191011 - MGP_BALBcJ_P0045503 Pnldc1 protein_coding protein_coding MGP_BALBcJ_T0045891.1 MGP_BALBcJ_G0023267.1 mouse_genomes_project 17 23014751 23020271 - MGP_BALBcJ_P0045891 Mlst8 protein_coding protein_coding MGP_BALBcJ_T0045892.1 MGP_BALBcJ_G0023267.1 mouse_genomes_project 17 23014751 23020271 - MGP_BALBcJ_P0045892 Mlst8 protein_coding protein_coding MGP_BALBcJ_T0045411.1 MGP_BALBcJ_G0023091.1 mouse_genomes_project 17 4306115 4382515 + MGP_BALBcJ_P0045411 protein_coding protein_coding MGP_BALBcJ_T0045935.1 MGP_BALBcJ_G0023277.1 mouse_genomes_project 17 23216958 23229296 + MGP_BALBcJ_P0045935 Zfp598 protein_coding protein_coding MGP_BALBcJ_T0046023.1 MGP_BALBcJ_G0023299.1 mouse_genomes_project 17 23524782 23578086 - MGP_BALBcJ_P0046023 Cramp1l protein_coding unknown_likely_coding MGP_BALBcJ_T0003722.1 MGP_BALBcJ_G0003353.1 mouse_genomes_project 17 29442172 29445290 - 1700097N02Rik antisense antisense MGP_BALBcJ_T0046257.1 MGP_BALBcJ_G0023354.1 mouse_genomes_project 17 24723926 24733836 + MGP_BALBcJ_P0046257 Tmem8 protein_coding protein_coding MGP_BALBcJ_T0046258.1 MGP_BALBcJ_G0023354.1 mouse_genomes_project 17 24730023 24733836 + MGP_BALBcJ_P0046258 Tmem8 protein_coding protein_coding MGP_BALBcJ_T0047912.1 MGP_BALBcJ_G0023782.1 mouse_genomes_project 17 46371448 46380768 - MGP_BALBcJ_P0047912 Srf protein_coding protein_coding MGP_BALBcJ_T0048322.1 MGP_BALBcJ_G0023929.1 mouse_genomes_project 17 63093866 63529318 - MGP_BALBcJ_P0048322 Fbxl17 protein_coding protein_coding MGP_BALBcJ_T0048323.1 MGP_BALBcJ_G0023929.1 mouse_genomes_project 17 63095139 63529318 - MGP_BALBcJ_P0048323 Fbxl17 protein_coding protein_coding MGP_BALBcJ_T0048324.1 MGP_BALBcJ_G0023929.1 mouse_genomes_project 17 63095469 63484259 - Fbxl17 protein_coding processed_transcript MGP_BALBcJ_T0048325.1 MGP_BALBcJ_G0023929.1 mouse_genomes_project 17 63096625 63479804 - Fbxl17 protein_coding processed_transcript MGP_BALBcJ_T0048326.1 MGP_BALBcJ_G0023929.1 mouse_genomes_project 17 63411532 63509383 - Fbxl17 protein_coding processed_transcript MGP_BALBcJ_T0013249.1 MGP_BALBcJ_G0011346.1 mouse_genomes_project 17 53491123 53491606 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013276.1 MGP_BALBcJ_G0011373.1 mouse_genomes_project 17 85851214 85851554 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100845.1 MGP_BALBcJ_G0038881.1 mouse_genomes_project 17 71784682 71784767 + Snord92 snoRNA snoRNA MGP_BALBcJ_T0046443.1 MGP_BALBcJ_G0023398.1 mouse_genomes_project 17 26951424 26973254 + MGP_BALBcJ_P0046443 Def6 protein_coding protein_coding MGP_BALBcJ_T0046444.1 MGP_BALBcJ_G0023398.1 mouse_genomes_project 17 26951483 26956187 + Def6 protein_coding processed_transcript MGP_BALBcJ_T0047950.1 MGP_BALBcJ_G0023801.1 mouse_genomes_project 17 46773515 46858107 - MGP_BALBcJ_P0047950 Ubr2 protein_coding protein_coding MGP_BALBcJ_T0047951.1 MGP_BALBcJ_G0023801.1 mouse_genomes_project 17 46773515 46858107 - MGP_BALBcJ_P0047951 Ubr2 protein_coding protein_coding MGP_BALBcJ_T0047952.1 MGP_BALBcJ_G0023801.1 mouse_genomes_project 17 46775582 46857794 - MGP_BALBcJ_P0047952 Ubr2 protein_coding unknown_likely_coding MGP_BALBcJ_T0045662.1 MGP_BALBcJ_G0023180.1 mouse_genomes_project 17 18871710 18873153 - MGP_BALBcJ_P0045662 Vmn1r228 protein_coding protein_coding MGP_BALBcJ_T0046565.1 MGP_BALBcJ_G0023421.1 mouse_genomes_project 17 27930113 27943560 + MGP_BALBcJ_P0046565 Rab44 protein_coding protein_coding MGP_BALBcJ_T0046566.1 MGP_BALBcJ_G0023421.1 mouse_genomes_project 17 27931396 27942823 + Rab44 protein_coding processed_transcript MGP_BALBcJ_T0099567.1 MGP_BALBcJ_G0037603.1 mouse_genomes_project 17 34916936 34917043 - Gm23864 snRNA snRNA MGP_BALBcJ_T0047944.1 MGP_BALBcJ_G0023796.1 mouse_genomes_project 17 46609031 46617746 - MGP_BALBcJ_P0047944 Rpl7l1 protein_coding protein_coding MGP_BALBcJ_T0048330.1 MGP_BALBcJ_G0023932.1 mouse_genomes_project 17 64324458 64375627 - MGP_BALBcJ_P0048330 Pja2 protein_coding protein_coding MGP_BALBcJ_T0048331.1 MGP_BALBcJ_G0023932.1 mouse_genomes_project 17 64324459 64356679 - MGP_BALBcJ_P0048331 Pja2 protein_coding protein_coding MGP_BALBcJ_T0048332.1 MGP_BALBcJ_G0023932.1 mouse_genomes_project 17 64324459 64356679 - MGP_BALBcJ_P0048332 Pja2 protein_coding protein_coding MGP_BALBcJ_T0048333.1 MGP_BALBcJ_G0023932.1 mouse_genomes_project 17 64324473 64375576 - MGP_BALBcJ_P0048333 Pja2 protein_coding protein_coding MGP_BALBcJ_T0046134.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24314163 24323838 - MGP_BALBcJ_P0046134 Chtf18 protein_coding protein_coding MGP_BALBcJ_T0046135.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24314163 24323790 - MGP_BALBcJ_P0046135 Chtf18 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046136.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24314267 24323785 - Chtf18 protein_coding retained_intron MGP_BALBcJ_T0046137.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24314283 24316138 - MGP_BALBcJ_P0046137 Chtf18 protein_coding protein_coding MGP_BALBcJ_T0046138.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24314284 24315189 - MGP_BALBcJ_P0046138 Chtf18 protein_coding protein_coding MGP_BALBcJ_T0046139.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24315505 24316135 - Chtf18 protein_coding retained_intron MGP_BALBcJ_T0046140.1 MGP_BALBcJ_G0023325.1 mouse_genomes_project 17 24321994 24323829 - MGP_BALBcJ_P0046140 Chtf18 protein_coding protein_coding MGP_BALBcJ_T0102322.1 MGP_BALBcJ_G0040138.1 mouse_genomes_project 17 33820091 33821487 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013218.1 MGP_BALBcJ_G0011315.1 mouse_genomes_project 17 35530115 35530295 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102336.1 MGP_BALBcJ_G0040152.1 mouse_genomes_project 17 35873314 35874538 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047549.1 MGP_BALBcJ_G0023643.1 mouse_genomes_project 17 35986419 35989801 - MGP_BALBcJ_P0047549 H2-M9 protein_coding protein_coding MGP_BALBcJ_T0047550.1 MGP_BALBcJ_G0023643.1 mouse_genomes_project 17 35987540 35989801 - MGP_BALBcJ_P0047550 H2-M9 protein_coding protein_coding MGP_BALBcJ_T0013188.1 MGP_BALBcJ_G0011285.1 mouse_genomes_project 17 11212252 11212751 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046066.1 MGP_BALBcJ_G0023308.1 mouse_genomes_project 17 23791153 23800244 + MGP_BALBcJ_P0046066 Gm5819 protein_coding protein_coding MGP_BALBcJ_T0011418.1 MGP_BALBcJ_G0009543.1 mouse_genomes_project 17 85866525 85866848 + Gm27283 misc_RNA misc_RNA MGP_BALBcJ_T0045896.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051508 23071339 - MGP_BALBcJ_P0045896 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045897.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051794 23055432 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045898.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051794 23062501 - MGP_BALBcJ_P0045898 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045899.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051794 23071251 - MGP_BALBcJ_P0045899 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045900.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051794 23071291 - MGP_BALBcJ_P0045900 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045901.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051794 23071247 - MGP_BALBcJ_P0045901 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045902.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051794 23062501 - MGP_BALBcJ_P0045902 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045903.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23051798 23053977 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045904.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23053006 23053456 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045905.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23053157 23055316 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045906.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23053429 23055511 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045907.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23054540 23056304 - MGP_BALBcJ_P0045907 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045908.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23054631 23057704 - MGP_BALBcJ_P0045908 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045909.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23055190 23071264 - MGP_BALBcJ_P0045909 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045910.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23055596 23056203 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045911.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23056023 23070890 - MGP_BALBcJ_P0045911 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045912.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23056206 23071247 - MGP_BALBcJ_P0045912 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045913.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23056218 23071234 - MGP_BALBcJ_P0045913 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045914.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23056225 23071312 - MGP_BALBcJ_P0045914 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045915.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23056301 23070949 - MGP_BALBcJ_P0045915 Traf7 protein_coding protein_coding MGP_BALBcJ_T0045916.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23056885 23071247 - MGP_BALBcJ_P0045916 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045917.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23057684 23071222 - MGP_BALBcJ_P0045917 Traf7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045918.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23059261 23071251 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0045919.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23059526 23071269 - Traf7 protein_coding processed_transcript MGP_BALBcJ_T0045920.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23061664 23071252 - Traf7 protein_coding processed_transcript MGP_BALBcJ_T0045921.1 MGP_BALBcJ_G0023270.1 mouse_genomes_project 17 23061865 23071185 - Traf7 protein_coding retained_intron MGP_BALBcJ_T0046080.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23831762 23844346 - MGP_BALBcJ_P0046080 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046081.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23831767 23843418 - MGP_BALBcJ_P0046081 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046082.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23832021 23844346 - MGP_BALBcJ_P0046082 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046083.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23832025 23835887 - MGP_BALBcJ_P0046083 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046084.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23832025 23843949 - MGP_BALBcJ_P0046084 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046085.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23832152 23843569 - MGP_BALBcJ_P0046085 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046086.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23832239 23846847 - MGP_BALBcJ_P0046086 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046087.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23834323 23835354 - Ube2i protein_coding retained_intron MGP_BALBcJ_T0046088.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23835146 23843625 - MGP_BALBcJ_P0046088 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046089.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23836581 23843902 - MGP_BALBcJ_P0046089 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046090.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23838423 23844338 - MGP_BALBcJ_P0046090 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046091.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23839268 23843635 - MGP_BALBcJ_P0046091 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046092.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23839417 23843190 - MGP_BALBcJ_P0046092 Ube2i protein_coding protein_coding MGP_BALBcJ_T0046093.1 MGP_BALBcJ_G0023312.1 mouse_genomes_project 17 23842697 23843294 - Ube2i protein_coding processed_transcript MGP_BALBcJ_T0045707.1 MGP_BALBcJ_G0023207.1 mouse_genomes_project 17 20276122 20439493 - MGP_BALBcJ_P0045707 protein_coding protein_coding MGP_BALBcJ_T0048271.1 MGP_BALBcJ_G0023904.1 mouse_genomes_project 17 56952041 56958149 + MGP_BALBcJ_P0048271 Clpp protein_coding protein_coding MGP_BALBcJ_T0048641.1 MGP_BALBcJ_G0024037.1 mouse_genomes_project 17 84421704 84426776 - MGP_BALBcJ_P0048641 Zfp36l2 protein_coding protein_coding MGP_BALBcJ_T0048054.1 MGP_BALBcJ_G0023827.1 mouse_genomes_project 17 48148909 48160417 + MGP_BALBcJ_P0048054 Trem3 protein_coding protein_coding MGP_BALBcJ_T0099583.1 MGP_BALBcJ_G0037619.1 mouse_genomes_project 17 76253116 76253222 + Gm24126 snRNA snRNA MGP_BALBcJ_T0047275.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34200228 34202824 + Abhd16a protein_coding retained_intron MGP_BALBcJ_T0047276.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34200256 34214122 + MGP_BALBcJ_P0047276 Abhd16a protein_coding protein_coding MGP_BALBcJ_T0047277.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34200279 34214091 + MGP_BALBcJ_P0047277 Abhd16a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047278.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34200835 34202964 + Abhd16a protein_coding retained_intron MGP_BALBcJ_T0047279.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34207482 34212077 + Abhd16a protein_coding processed_transcript MGP_BALBcJ_T0047280.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34211067 34211832 + Abhd16a protein_coding retained_intron MGP_BALBcJ_T0047281.1 MGP_BALBcJ_G0023582.1 mouse_genomes_project 17 34211990 34213165 + Abhd16a protein_coding retained_intron MGP_BALBcJ_T0048644.1 MGP_BALBcJ_G0024040.1 mouse_genomes_project 17 84864916 84895280 + MGP_BALBcJ_P0048644 Dync2li1 protein_coding protein_coding MGP_BALBcJ_T0046662.1 MGP_BALBcJ_G0023450.1 mouse_genomes_project 17 30133423 30190045 + MGP_BALBcJ_P0046662 Slc37a1 protein_coding protein_coding MGP_BALBcJ_T0046663.1 MGP_BALBcJ_G0023450.1 mouse_genomes_project 17 30134159 30190045 + MGP_BALBcJ_P0046663 Slc37a1 protein_coding protein_coding MGP_BALBcJ_T0047709.1 MGP_BALBcJ_G0023733.1 mouse_genomes_project 17 42791879 42864774 + MGP_BALBcJ_P0047709 Tnfrsf21 protein_coding protein_coding MGP_BALBcJ_T0048487.1 MGP_BALBcJ_G0023973.1 mouse_genomes_project 17 71941450 72016806 + MGP_BALBcJ_P0048487 Clip4 protein_coding protein_coding MGP_BALBcJ_T0048488.1 MGP_BALBcJ_G0023973.1 mouse_genomes_project 17 71942198 72016812 + MGP_BALBcJ_P0048488 Clip4 protein_coding unknown_likely_coding MGP_BALBcJ_T0045634.1 MGP_BALBcJ_G0023154.1 mouse_genomes_project 17 15513399 15514308 - MGP_BALBcJ_P0045634 Gm7535 protein_coding protein_coding MGP_BALBcJ_T0047093.1 MGP_BALBcJ_G0023546.1 mouse_genomes_project 17 33646857 33649229 - MGP_BALBcJ_P0047093 Rnf5 protein_coding unknown_likely_coding MGP_BALBcJ_T0047094.1 MGP_BALBcJ_G0023546.1 mouse_genomes_project 17 33647071 33649132 - Rnf5 protein_coding retained_intron MGP_BALBcJ_T0047095.1 MGP_BALBcJ_G0023546.1 mouse_genomes_project 17 33647539 33649417 - Rnf5 protein_coding retained_intron MGP_BALBcJ_T0006919.1 MGP_BALBcJ_G0005693.1 mouse_genomes_project 17 33294698 33307793 - Gm20513 lincRNA lincRNA MGP_BALBcJ_T0006946.1 MGP_BALBcJ_G0005713.1 mouse_genomes_project 17 59966259 60092539 - Gm29051 lincRNA lincRNA MGP_BALBcJ_T0048651.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 84945927 85030983 - MGP_BALBcJ_P0048651 Lrpprc protein_coding protein_coding MGP_BALBcJ_T0048652.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 84953446 84971847 - Lrpprc protein_coding processed_transcript MGP_BALBcJ_T0048653.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 84971842 84991848 - MGP_BALBcJ_P0048653 Lrpprc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048654.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 84989366 84991848 - Lrpprc protein_coding retained_intron MGP_BALBcJ_T0048655.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 85006978 85031214 - Lrpprc protein_coding retained_intron MGP_BALBcJ_T0048656.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 85008139 85030987 - Lrpprc protein_coding retained_intron MGP_BALBcJ_T0048657.1 MGP_BALBcJ_G0024043.1 mouse_genomes_project 17 85010885 85017968 - Lrpprc protein_coding processed_transcript MGP_BALBcJ_T0100840.1 MGP_BALBcJ_G0038876.1 mouse_genomes_project 17 54559039 54559176 + Gm26291 snoRNA snoRNA MGP_BALBcJ_T0003715.1 MGP_BALBcJ_G0003348.1 mouse_genomes_project 17 26729110 26749237 - Gm15598 antisense antisense MGP_BALBcJ_T0046451.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27061990 27075018 + MGP_BALBcJ_P0046451 Fance protein_coding protein_coding MGP_BALBcJ_T0046452.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27062007 27075018 + Fance protein_coding retained_intron MGP_BALBcJ_T0046453.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27062026 27075017 + MGP_BALBcJ_P0046453 Fance protein_coding protein_coding MGP_BALBcJ_T0046454.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27062032 27075019 + MGP_BALBcJ_P0046454 Fance protein_coding protein_coding MGP_BALBcJ_T0046455.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27062104 27074704 + MGP_BALBcJ_P0046455 Fance protein_coding protein_coding MGP_BALBcJ_T0046456.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27064577 27069284 + MGP_BALBcJ_P0046456 Fance protein_coding protein_coding MGP_BALBcJ_T0046457.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27064614 27065600 + Fance protein_coding retained_intron MGP_BALBcJ_T0046458.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27065510 27066730 + Fance protein_coding retained_intron MGP_BALBcJ_T0046459.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27065966 27067392 + Fance protein_coding processed_transcript MGP_BALBcJ_T0046460.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27066021 27074735 + MGP_BALBcJ_P0046460 Fance protein_coding protein_coding MGP_BALBcJ_T0046461.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27066320 27069268 + Fance protein_coding retained_intron MGP_BALBcJ_T0046462.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27066577 27074900 + MGP_BALBcJ_P0046462 Fance protein_coding protein_coding MGP_BALBcJ_T0046463.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27066806 27074950 + MGP_BALBcJ_P0046463 Fance protein_coding protein_coding MGP_BALBcJ_T0046464.1 MGP_BALBcJ_G0023400.1 mouse_genomes_project 17 27066915 27075018 + Fance protein_coding processed_transcript MGP_BALBcJ_T0047610.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36478116 36507163 + MGP_BALBcJ_P0047610 Gabbr1 protein_coding protein_coding MGP_BALBcJ_T0047611.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36478170 36506386 + MGP_BALBcJ_P0047611 Gabbr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047612.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36478178 36481626 + MGP_BALBcJ_P0047612 Gabbr1 protein_coding protein_coding MGP_BALBcJ_T0047613.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36478349 36478991 + Gabbr1 protein_coding retained_intron MGP_BALBcJ_T0047614.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36478718 36481626 + MGP_BALBcJ_P0047614 Gabbr1 protein_coding protein_coding MGP_BALBcJ_T0047615.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36480736 36483286 + Gabbr1 protein_coding processed_transcript MGP_BALBcJ_T0047616.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36482789 36506400 + MGP_BALBcJ_P0047616 Gabbr1 protein_coding protein_coding MGP_BALBcJ_T0047617.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36482832 36488525 + MGP_BALBcJ_P0047617 Gabbr1 protein_coding protein_coding MGP_BALBcJ_T0047618.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36487879 36489032 + Gabbr1 protein_coding retained_intron MGP_BALBcJ_T0047619.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36495127 36496999 + Gabbr1 protein_coding retained_intron MGP_BALBcJ_T0047620.1 MGP_BALBcJ_G0023660.1 mouse_genomes_project 17 36502562 36504334 + Gabbr1 protein_coding retained_intron MGP_BALBcJ_T0046853.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32600893 32633934 - MGP_BALBcJ_P0046853 March2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046854.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32600913 32633909 - MGP_BALBcJ_P0046854 March2 protein_coding protein_coding MGP_BALBcJ_T0046855.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32601010 32633909 - MGP_BALBcJ_P0046855 March2 protein_coding protein_coding MGP_BALBcJ_T0046856.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32606689 32633917 - MGP_BALBcJ_P0046856 March2 protein_coding protein_coding MGP_BALBcJ_T0046857.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32606689 32633904 - MGP_BALBcJ_P0046857 March2 protein_coding protein_coding MGP_BALBcJ_T0046858.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32607013 32618373 - MGP_BALBcJ_P0046858 March2 protein_coding protein_coding MGP_BALBcJ_T0046859.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32609389 32633921 - MGP_BALBcJ_P0046859 March2 protein_coding protein_coding MGP_BALBcJ_T0046860.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32611194 32633855 - MGP_BALBcJ_P0046860 March2 protein_coding protein_coding MGP_BALBcJ_T0046861.1 MGP_BALBcJ_G0023497.1 mouse_genomes_project 17 32618310 32628713 - MGP_BALBcJ_P0046861 March2 protein_coding protein_coding MGP_BALBcJ_T0048677.1 MGP_BALBcJ_G0024054.1 mouse_genomes_project 17 87208873 87213895 + MGP_BALBcJ_P0048677 Tmem247 protein_coding protein_coding MGP_BALBcJ_T0048678.1 MGP_BALBcJ_G0024054.1 mouse_genomes_project 17 87209936 87213902 + MGP_BALBcJ_P0048678 Tmem247 protein_coding protein_coding MGP_BALBcJ_T0047047.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33399353 33461798 + MGP_BALBcJ_P0047047 BC051142 protein_coding protein_coding MGP_BALBcJ_T0047048.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33399354 33418773 + BC051142 protein_coding processed_transcript MGP_BALBcJ_T0047049.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33399354 33446473 + MGP_BALBcJ_P0047049 BC051142 protein_coding protein_coding MGP_BALBcJ_T0047050.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33399354 33461798 + MGP_BALBcJ_P0047050 BC051142 protein_coding protein_coding MGP_BALBcJ_T0047051.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33399355 33421889 + BC051142 protein_coding retained_intron MGP_BALBcJ_T0047052.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33399374 33461798 + MGP_BALBcJ_P0047052 BC051142 protein_coding protein_coding MGP_BALBcJ_T0047053.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33418157 33440803 + MGP_BALBcJ_P0047053 BC051142 protein_coding protein_coding MGP_BALBcJ_T0047054.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33418768 33437038 + BC051142 protein_coding processed_transcript MGP_BALBcJ_T0047055.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33418790 33422653 + MGP_BALBcJ_P0047055 BC051142 protein_coding protein_coding MGP_BALBcJ_T0047056.1 MGP_BALBcJ_G0023539.1 mouse_genomes_project 17 33420294 33461799 + MGP_BALBcJ_P0047056 BC051142 protein_coding unknown_likely_coding MGP_BALBcJ_T0047710.1 MGP_BALBcJ_G0023734.1 mouse_genomes_project 17 43041233 43096794 + MGP_BALBcJ_P0047710 Adgrf1 protein_coding protein_coding MGP_BALBcJ_T0048563.1 MGP_BALBcJ_G0024003.1 mouse_genomes_project 17 79089540 79112849 - MGP_BALBcJ_P0048563 Sult6b1 protein_coding protein_coding MGP_BALBcJ_T0048564.1 MGP_BALBcJ_G0024003.1 mouse_genomes_project 17 79090491 79101045 - Sult6b1 protein_coding processed_transcript MGP_BALBcJ_T0048565.1 MGP_BALBcJ_G0024003.1 mouse_genomes_project 17 79090660 79112756 - MGP_BALBcJ_P0048565 Sult6b1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048566.1 MGP_BALBcJ_G0024003.1 mouse_genomes_project 17 79090660 79112756 - MGP_BALBcJ_P0048566 Sult6b1 protein_coding protein_coding MGP_BALBcJ_T0048328.1 MGP_BALBcJ_G0023931.1 mouse_genomes_project 17 63898934 64173935 + MGP_BALBcJ_P0048328 protein_coding unknown_likely_coding MGP_BALBcJ_T0048329.1 MGP_BALBcJ_G0023931.1 mouse_genomes_project 17 63975205 64174412 + MGP_BALBcJ_P0048329 protein_coding protein_coding MGP_BALBcJ_T0046144.1 MGP_BALBcJ_G0023329.1 mouse_genomes_project 17 24371559 24381780 + MGP_BALBcJ_P0046144 Narfl protein_coding protein_coding MGP_BALBcJ_T0046145.1 MGP_BALBcJ_G0023329.1 mouse_genomes_project 17 24371559 24381239 + MGP_BALBcJ_P0046145 Narfl protein_coding protein_coding MGP_BALBcJ_T0046146.1 MGP_BALBcJ_G0023329.1 mouse_genomes_project 17 24371590 24373009 + Narfl protein_coding retained_intron MGP_BALBcJ_T0046147.1 MGP_BALBcJ_G0023329.1 mouse_genomes_project 17 24371600 24377961 + MGP_BALBcJ_P0046147 Narfl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046148.1 MGP_BALBcJ_G0023329.1 mouse_genomes_project 17 24371602 24381244 + Narfl protein_coding retained_intron MGP_BALBcJ_T0046149.1 MGP_BALBcJ_G0023329.1 mouse_genomes_project 17 24375272 24378041 + Narfl protein_coding retained_intron MGP_BALBcJ_T0006932.1 MGP_BALBcJ_G0005705.1 mouse_genomes_project 17 46085555 46092466 + Gm26785 lincRNA lincRNA MGP_BALBcJ_T0010209.1 MGP_BALBcJ_G0008334.1 mouse_genomes_project 17 91445338 91445399 + Gm27475 miRNA miRNA MGP_BALBcJ_T0102305.1 MGP_BALBcJ_G0040121.1 mouse_genomes_project 17 21623460 21660830 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000991.1 MGP_BALBcJ_G0000919.1 mouse_genomes_project 17 71504986 71506289 - TEC TEC MGP_BALBcJ_T0046818.1 MGP_BALBcJ_G0023491.1 mouse_genomes_project 17 32354700 32356073 + MGP_BALBcJ_P0046818 Actl9 protein_coding protein_coding MGP_BALBcJ_T0045970.1 MGP_BALBcJ_G0023289.1 mouse_genomes_project 17 23411826 23413232 - MGP_BALBcJ_P0045970 Fahd1 protein_coding protein_coding MGP_BALBcJ_T0048200.1 MGP_BALBcJ_G0023880.1 mouse_genomes_project 17 56188970 56196410 - MGP_BALBcJ_P0048200 Ticam1 protein_coding protein_coding MGP_BALBcJ_T0047948.1 MGP_BALBcJ_G0023800.1 mouse_genomes_project 17 46751763 46769760 + MGP_BALBcJ_P0047948 Prph2 protein_coding protein_coding MGP_BALBcJ_T0047949.1 MGP_BALBcJ_G0023800.1 mouse_genomes_project 17 46751782 46765167 + Prph2 protein_coding retained_intron MGP_BALBcJ_T0046761.1 MGP_BALBcJ_G0023467.1 mouse_genomes_project 17 31272597 31280667 - MGP_BALBcJ_P0046761 Pglyrp2 protein_coding protein_coding MGP_BALBcJ_T0046762.1 MGP_BALBcJ_G0023467.1 mouse_genomes_project 17 31272858 31284202 - MGP_BALBcJ_P0046762 Pglyrp2 protein_coding protein_coding MGP_BALBcJ_T0101646.1 MGP_BALBcJ_G0039648.1 mouse_genomes_project 17 24503142 24503622 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101647.1 MGP_BALBcJ_G0039648.1 mouse_genomes_project 17 24503148 24503339 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0013234.1 MGP_BALBcJ_G0011331.1 mouse_genomes_project 17 37439706 37440078 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048001.1 MGP_BALBcJ_G0023815.1 mouse_genomes_project 17 47551775 47559491 - MGP_BALBcJ_P0048001 Prickle4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046497.1 MGP_BALBcJ_G0023407.1 mouse_genomes_project 17 27328048 27330600 - MGP_BALBcJ_P0046497 Clps protein_coding protein_coding MGP_BALBcJ_T0046498.1 MGP_BALBcJ_G0023407.1 mouse_genomes_project 17 27328051 27330545 - MGP_BALBcJ_P0046498 Clps protein_coding protein_coding MGP_BALBcJ_T0048545.1 MGP_BALBcJ_G0023993.1 mouse_genomes_project 17 75611033 75707095 + MGP_BALBcJ_P0048545 Rasgrp3 protein_coding protein_coding MGP_BALBcJ_T0048546.1 MGP_BALBcJ_G0023993.1 mouse_genomes_project 17 75642623 75707095 + MGP_BALBcJ_P0048546 Rasgrp3 protein_coding protein_coding MGP_BALBcJ_T0047390.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34885733 34891746 - MGP_BALBcJ_P0047390 Gtf2h4 protein_coding protein_coding MGP_BALBcJ_T0047391.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34885741 34886776 - Gtf2h4 protein_coding retained_intron MGP_BALBcJ_T0047392.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34885742 34887855 - Gtf2h4 protein_coding retained_intron MGP_BALBcJ_T0047393.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34885744 34891625 - MGP_BALBcJ_P0047393 Gtf2h4 protein_coding protein_coding MGP_BALBcJ_T0047394.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34885845 34891710 - MGP_BALBcJ_P0047394 Gtf2h4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047395.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34888388 34891695 - Gtf2h4 protein_coding retained_intron MGP_BALBcJ_T0047396.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34888745 34891697 - MGP_BALBcJ_P0047396 Gtf2h4 protein_coding protein_coding MGP_BALBcJ_T0047397.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34889346 34891524 - MGP_BALBcJ_P0047397 Gtf2h4 protein_coding protein_coding MGP_BALBcJ_T0047398.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34889753 34891688 - Gtf2h4 protein_coding retained_intron MGP_BALBcJ_T0047399.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34889890 34891305 - Gtf2h4 protein_coding retained_intron MGP_BALBcJ_T0047400.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34890046 34891566 - Gtf2h4 protein_coding processed_transcript MGP_BALBcJ_T0047401.1 MGP_BALBcJ_G0023610.1 mouse_genomes_project 17 34890061 34891666 - MGP_BALBcJ_P0047401 Gtf2h4 protein_coding protein_coding MGP_BALBcJ_T0102324.1 MGP_BALBcJ_G0040140.1 mouse_genomes_project 17 35174120 35179170 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045702.1 MGP_BALBcJ_G0023205.1 mouse_genomes_project 17 20167497 20196222 + MGP_BALBcJ_P0045702 Zfp943 protein_coding protein_coding MGP_BALBcJ_T0045703.1 MGP_BALBcJ_G0023205.1 mouse_genomes_project 17 20167504 20193900 + MGP_BALBcJ_P0045703 Zfp943 protein_coding protein_coding MGP_BALBcJ_T0045704.1 MGP_BALBcJ_G0023205.1 mouse_genomes_project 17 20167531 20281502 + MGP_BALBcJ_P0045704 Zfp943 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045705.1 MGP_BALBcJ_G0023205.1 mouse_genomes_project 17 20208147 20214020 + Zfp943 protein_coding processed_transcript MGP_BALBcJ_T0006925.1 MGP_BALBcJ_G0005699.1 mouse_genomes_project 17 35225425 35227287 + Gm20508 lincRNA lincRNA MGP_BALBcJ_T0048007.1 MGP_BALBcJ_G0023817.1 mouse_genomes_project 17 47554067 47564578 + MGP_BALBcJ_P0048007 Frs3 protein_coding protein_coding MGP_BALBcJ_T0048010.1 MGP_BALBcJ_G0023817.1 mouse_genomes_project 17 47560233 47569315 + MGP_BALBcJ_P0048010 Frs3 protein_coding protein_coding MGP_BALBcJ_T0048011.1 MGP_BALBcJ_G0023817.1 mouse_genomes_project 17 47560260 47562705 + Frs3 protein_coding processed_transcript MGP_BALBcJ_T0048012.1 MGP_BALBcJ_G0023817.1 mouse_genomes_project 17 47564585 47565902 + Frs3 protein_coding processed_transcript MGP_BALBcJ_T0048013.1 MGP_BALBcJ_G0023817.1 mouse_genomes_project 17 47567091 47569313 + Frs3 protein_coding processed_transcript MGP_BALBcJ_T0046872.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32743800 32749154 - MGP_BALBcJ_P0046872 Rps28 protein_coding protein_coding MGP_BALBcJ_T0046875.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32747702 32749224 - MGP_BALBcJ_P0046875 Rps28 protein_coding protein_coding MGP_BALBcJ_T0046876.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32747703 32749158 - MGP_BALBcJ_P0046876 Rps28 protein_coding protein_coding MGP_BALBcJ_T0046877.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32747716 32749127 - Rps28 protein_coding processed_transcript MGP_BALBcJ_T0046878.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32747716 32749224 - MGP_BALBcJ_P0046878 Rps28 protein_coding protein_coding MGP_BALBcJ_T0046879.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32747718 32749138 - MGP_BALBcJ_P0046879 Rps28 protein_coding protein_coding MGP_BALBcJ_T0046880.1 MGP_BALBcJ_G0023501.1 mouse_genomes_project 17 32748252 32749146 - Rps28 protein_coding retained_intron MGP_BALBcJ_T0048614.1 MGP_BALBcJ_G0024028.1 mouse_genomes_project 17 81271491 81310080 - MGP_BALBcJ_P0048614 Thumpd2 protein_coding protein_coding MGP_BALBcJ_T0047713.1 MGP_BALBcJ_G0023736.1 mouse_genomes_project 17 43254268 43282957 - MGP_BALBcJ_P0047713 Mep1a protein_coding protein_coding MGP_BALBcJ_T0047714.1 MGP_BALBcJ_G0023736.1 mouse_genomes_project 17 43254275 43282918 - MGP_BALBcJ_P0047714 Mep1a protein_coding protein_coding MGP_BALBcJ_T0047715.1 MGP_BALBcJ_G0023736.1 mouse_genomes_project 17 43278044 43280627 - Mep1a protein_coding processed_transcript MGP_BALBcJ_T0047716.1 MGP_BALBcJ_G0023736.1 mouse_genomes_project 17 43282388 43282878 - Mep1a protein_coding retained_intron MGP_BALBcJ_T0006922.1 MGP_BALBcJ_G0005696.1 mouse_genomes_project 17 34952325 34954401 - Gm20443 lincRNA lincRNA MGP_BALBcJ_T0098853.1 MGP_BALBcJ_G0036902.1 mouse_genomes_project 17 63331920 63339446 - 4930405O22Rik sense_intronic sense_intronic MGP_BALBcJ_T0098854.1 MGP_BALBcJ_G0036902.1 mouse_genomes_project 17 63332153 63339448 - 4930405O22Rik sense_intronic sense_intronic MGP_BALBcJ_T0045361.1 MGP_BALBcJ_G0023074.1 mouse_genomes_project 17 637579 700636 - MGP_BALBcJ_P0045361 Nox3 protein_coding protein_coding MGP_BALBcJ_T0048134.1 MGP_BALBcJ_G0023847.1 mouse_genomes_project 17 52510375 52890083 + MGP_BALBcJ_P0048134 Kcnh8 protein_coding protein_coding MGP_BALBcJ_T0048135.1 MGP_BALBcJ_G0023847.1 mouse_genomes_project 17 52860664 52889268 + Kcnh8 protein_coding retained_intron MGP_BALBcJ_T0047901.1 MGP_BALBcJ_G0023780.1 mouse_genomes_project 17 46319836 46322666 + MGP_BALBcJ_P0047901 Dnph1 protein_coding protein_coding MGP_BALBcJ_T0047991.1 MGP_BALBcJ_G0023812.1 mouse_genomes_project 17 47473226 47513806 + Gm20517 protein_coding retained_intron MGP_BALBcJ_T0047992.1 MGP_BALBcJ_G0023812.1 mouse_genomes_project 17 47473235 47515130 + Gm20517 protein_coding retained_intron MGP_BALBcJ_T0047994.1 MGP_BALBcJ_G0023812.1 mouse_genomes_project 17 47473250 47548099 + MGP_BALBcJ_P0047994 Gm20517 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047803.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45449627 45475594 - MGP_BALBcJ_P0047803 Tmem63b protein_coding protein_coding MGP_BALBcJ_T0047804.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45452464 45454683 - Tmem63b protein_coding retained_intron MGP_BALBcJ_T0047805.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45453556 45455944 - Tmem63b protein_coding retained_intron MGP_BALBcJ_T0047806.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45457205 45475307 - MGP_BALBcJ_P0047806 Tmem63b protein_coding protein_coding MGP_BALBcJ_T0047807.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45459504 45476240 - MGP_BALBcJ_P0047807 Tmem63b protein_coding protein_coding MGP_BALBcJ_T0047808.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45463236 45469950 - MGP_BALBcJ_P0047808 Tmem63b protein_coding protein_coding MGP_BALBcJ_T0047809.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45463466 45475472 - MGP_BALBcJ_P0047809 Tmem63b protein_coding protein_coding MGP_BALBcJ_T0047810.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45468290 45475455 - MGP_BALBcJ_P0047810 Tmem63b protein_coding protein_coding MGP_BALBcJ_T0047811.1 MGP_BALBcJ_G0023759.1 mouse_genomes_project 17 45475558 45476222 - Tmem63b protein_coding processed_transcript MGP_BALBcJ_T0048178.1 MGP_BALBcJ_G0023870.1 mouse_genomes_project 17 55948889 55979686 + MGP_BALBcJ_P0048178 Chaf1a protein_coding protein_coding MGP_BALBcJ_T0048554.1 MGP_BALBcJ_G0023998.1 mouse_genomes_project 17 78842895 78938460 - MGP_BALBcJ_P0048554 Strn protein_coding protein_coding MGP_BALBcJ_T0048555.1 MGP_BALBcJ_G0023998.1 mouse_genomes_project 17 78860335 78877647 - MGP_BALBcJ_P0048555 Strn protein_coding protein_coding MGP_BALBcJ_T0048585.1 MGP_BALBcJ_G0024012.1 mouse_genomes_project 17 79917950 79926025 - MGP_BALBcJ_P0048585 Cyp1b1 protein_coding protein_coding MGP_BALBcJ_T0006877.1 MGP_BALBcJ_G0005659.1 mouse_genomes_project 17 10498883 10507829 + lincRNA lincRNA MGP_BALBcJ_T0011403.1 MGP_BALBcJ_G0009528.1 mouse_genomes_project 17 35585321 35585639 - Gm22453 misc_RNA misc_RNA MGP_BALBcJ_T0046371.1 MGP_BALBcJ_G0023383.1 mouse_genomes_project 17 26293561 26300641 + MGP_BALBcJ_P0046371 protein_coding protein_coding MGP_BALBcJ_T0046372.1 MGP_BALBcJ_G0023383.1 mouse_genomes_project 17 26293564 26300635 + MGP_BALBcJ_P0046372 protein_coding protein_coding MGP_BALBcJ_T0046373.1 MGP_BALBcJ_G0023383.1 mouse_genomes_project 17 26293582 26299991 + MGP_BALBcJ_P0046373 protein_coding protein_coding MGP_BALBcJ_T0046374.1 MGP_BALBcJ_G0023383.1 mouse_genomes_project 17 26293609 26300026 + MGP_BALBcJ_P0046374 protein_coding protein_coding MGP_BALBcJ_T0046375.1 MGP_BALBcJ_G0023383.1 mouse_genomes_project 17 26293609 26300630 + MGP_BALBcJ_P0046375 protein_coding protein_coding MGP_BALBcJ_T0046099.1 MGP_BALBcJ_G0023317.1 mouse_genomes_project 17 23945141 23946686 + MGP_BALBcJ_P0046099 Tpsb2 protein_coding protein_coding MGP_BALBcJ_T0047621.1 MGP_BALBcJ_G0023661.1 mouse_genomes_project 17 36517265 36517920 - MGP_BALBcJ_P0047621 Olfr90 protein_coding protein_coding MGP_BALBcJ_T0003712.1 MGP_BALBcJ_G0003345.1 mouse_genomes_project 17 25787227 25789005 - Itpr3os antisense antisense MGP_BALBcJ_T0048369.1 MGP_BALBcJ_G0023944.1 mouse_genomes_project 17 66189932 66198907 + MGP_BALBcJ_P0048369 Wash1 protein_coding protein_coding MGP_BALBcJ_T0048370.1 MGP_BALBcJ_G0023944.1 mouse_genomes_project 17 66190031 66198907 + MGP_BALBcJ_P0048370 Wash1 protein_coding protein_coding MGP_BALBcJ_T0047929.1 MGP_BALBcJ_G0023789.1 mouse_genomes_project 17 46514062 46516865 + MGP_BALBcJ_P0047929 Mea1 protein_coding protein_coding MGP_BALBcJ_T0046812.1 MGP_BALBcJ_G0023489.1 mouse_genomes_project 17 32251697 32287287 - MGP_BALBcJ_P0046812 Zfp81 protein_coding protein_coding MGP_BALBcJ_T0046637.1 MGP_BALBcJ_G0023437.1 mouse_genomes_project 17 28815762 29019024 + MGP_BALBcJ_P0046637 Zfand3 protein_coding protein_coding MGP_BALBcJ_T0046638.1 MGP_BALBcJ_G0023437.1 mouse_genomes_project 17 28815885 29019836 + MGP_BALBcJ_P0046638 Zfand3 protein_coding unknown_likely_coding MGP_BALBcJ_T0048729.1 MGP_BALBcJ_G0024071.1 mouse_genomes_project 17 88880558 88938624 + MGP_BALBcJ_P0048729 Ppp1r21 protein_coding protein_coding MGP_BALBcJ_T0048730.1 MGP_BALBcJ_G0024071.1 mouse_genomes_project 17 88880656 88893849 + Ppp1r21 protein_coding retained_intron MGP_BALBcJ_T0048731.1 MGP_BALBcJ_G0024071.1 mouse_genomes_project 17 88912520 88916220 + Ppp1r21 protein_coding retained_intron MGP_BALBcJ_T0048732.1 MGP_BALBcJ_G0024071.1 mouse_genomes_project 17 88925334 88927583 + Ppp1r21 protein_coding retained_intron MGP_BALBcJ_T0048733.1 MGP_BALBcJ_G0024071.1 mouse_genomes_project 17 88925452 88929440 + Ppp1r21 protein_coding retained_intron MGP_BALBcJ_T0048734.1 MGP_BALBcJ_G0024071.1 mouse_genomes_project 17 88928989 88938622 + Ppp1r21 protein_coding retained_intron MGP_BALBcJ_T0048153.1 MGP_BALBcJ_G0023857.1 mouse_genomes_project 17 55374043 55411833 + MGP_BALBcJ_P0048153 St6gal2 protein_coding protein_coding MGP_BALBcJ_T0048154.1 MGP_BALBcJ_G0023857.1 mouse_genomes_project 17 55374050 55426817 + MGP_BALBcJ_P0048154 St6gal2 protein_coding protein_coding MGP_BALBcJ_T0048155.1 MGP_BALBcJ_G0023857.1 mouse_genomes_project 17 55374211 55447346 + MGP_BALBcJ_P0048155 St6gal2 protein_coding protein_coding MGP_BALBcJ_T0048156.1 MGP_BALBcJ_G0023857.1 mouse_genomes_project 17 55374907 55411169 + St6gal2 protein_coding processed_transcript MGP_BALBcJ_T0013219.1 MGP_BALBcJ_G0011316.1 mouse_genomes_project 17 35532193 35532233 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006954.1 MGP_BALBcJ_G0005717.1 mouse_genomes_project 17 70842755 70853458 - 5031415H12Rik lincRNA lincRNA MGP_BALBcJ_T0047554.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257392 36258108 + Trim26 protein_coding retained_intron MGP_BALBcJ_T0047555.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257399 36276439 + Trim26 protein_coding retained_intron MGP_BALBcJ_T0047556.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257399 36279788 + MGP_BALBcJ_P0047556 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047557.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257401 36279806 + MGP_BALBcJ_P0047557 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047558.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257404 36279788 + MGP_BALBcJ_P0047558 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047559.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257431 36273093 + MGP_BALBcJ_P0047559 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047560.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257442 36279805 + MGP_BALBcJ_P0047560 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047561.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36257442 36278035 + MGP_BALBcJ_P0047561 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047562.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36272905 36278347 + MGP_BALBcJ_P0047562 Trim26 protein_coding protein_coding MGP_BALBcJ_T0047563.1 MGP_BALBcJ_G0023647.1 mouse_genomes_project 17 36275036 36279806 + Trim26 protein_coding processed_transcript MGP_BALBcJ_T0013180.1 MGP_BALBcJ_G0011277.1 mouse_genomes_project 17 6053727 6054283 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046763.1 MGP_BALBcJ_G0023468.1 mouse_genomes_project 17 31332519 31360086 + MGP_BALBcJ_P0046763 Cyp4f39 protein_coding protein_coding MGP_BALBcJ_T0046654.1 MGP_BALBcJ_G0023447.1 mouse_genomes_project 17 30017869 30036421 - MGP_BALBcJ_P0046654 Tmprss3 protein_coding protein_coding MGP_BALBcJ_T0046655.1 MGP_BALBcJ_G0023447.1 mouse_genomes_project 17 30017869 30037628 - MGP_BALBcJ_P0046655 Tmprss3 protein_coding protein_coding MGP_BALBcJ_T0046803.1 MGP_BALBcJ_G0023483.1 mouse_genomes_project 17 31960112 31964028 - MGP_BALBcJ_P0046803 4921501E09Rik protein_coding protein_coding MGP_BALBcJ_T0102319.1 MGP_BALBcJ_G0040135.1 mouse_genomes_project 17 33568231 33592551 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006944.1 MGP_BALBcJ_G0005711.1 mouse_genomes_project 17 54260121 54277557 - 1700025K24Rik lincRNA lincRNA MGP_BALBcJ_T0047942.1 MGP_BALBcJ_G0023794.1 mouse_genomes_project 17 46590181 46598915 - MGP_BALBcJ_P0047942 Ptcra protein_coding protein_coding MGP_BALBcJ_T0047739.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44278768 44522161 - MGP_BALBcJ_P0047739 Runx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047740.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44388787 44522633 - MGP_BALBcJ_P0047740 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047741.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44388787 44601718 - MGP_BALBcJ_P0047741 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047742.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44391046 44521695 - MGP_BALBcJ_P0047742 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047743.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44392317 44601502 - MGP_BALBcJ_P0047743 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047744.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44392605 44521619 - MGP_BALBcJ_P0047744 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047745.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44392605 44601147 - MGP_BALBcJ_P0047745 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047746.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44392691 44601548 - MGP_BALBcJ_P0047746 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047747.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44392787 44601718 - MGP_BALBcJ_P0047747 Runx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047748.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44393101 44521351 - MGP_BALBcJ_P0047748 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047749.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44421381 44521619 - MGP_BALBcJ_P0047749 Runx2 protein_coding unknown_likely_coding MGP_BALBcJ_T0047750.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44424809 44520678 - MGP_BALBcJ_P0047750 Runx2 protein_coding protein_coding MGP_BALBcJ_T0047751.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44424905 44601185 - MGP_BALBcJ_P0047751 Runx2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047756.1 MGP_BALBcJ_G0023746.1 mouse_genomes_project 17 44600826 44601548 - Runx2 protein_coding retained_intron MGP_BALBcJ_T0100826.1 MGP_BALBcJ_G0038862.1 mouse_genomes_project 17 10207111 10207239 + Snora20 snoRNA snoRNA MGP_BALBcJ_T0047733.1 MGP_BALBcJ_G0023743.1 mouse_genomes_project 17 43855427 43863050 + MGP_BALBcJ_P0047733 Enpp5 protein_coding protein_coding MGP_BALBcJ_T0047734.1 MGP_BALBcJ_G0023743.1 mouse_genomes_project 17 43855459 43863041 + MGP_BALBcJ_P0047734 Enpp5 protein_coding protein_coding MGP_BALBcJ_T0047735.1 MGP_BALBcJ_G0023743.1 mouse_genomes_project 17 43855493 43863050 + MGP_BALBcJ_P0047735 Enpp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048192.1 MGP_BALBcJ_G0023875.1 mouse_genomes_project 17 56033117 56035384 - MGP_BALBcJ_P0048192 Lrg1 protein_coding protein_coding MGP_BALBcJ_T0003690.1 MGP_BALBcJ_G0003333.1 mouse_genomes_project 17 7740573 7758705 + A230009B12Rik antisense antisense MGP_BALBcJ_T0003691.1 MGP_BALBcJ_G0003333.1 mouse_genomes_project 17 7740579 7758341 + A230009B12Rik antisense antisense MGP_BALBcJ_T0003692.1 MGP_BALBcJ_G0003333.1 mouse_genomes_project 17 7740653 7777812 + A230009B12Rik antisense antisense MGP_BALBcJ_T0003693.1 MGP_BALBcJ_G0003333.1 mouse_genomes_project 17 7749205 7758340 + A230009B12Rik antisense antisense MGP_BALBcJ_T0048269.1 MGP_BALBcJ_G0023902.1 mouse_genomes_project 17 56853383 56896518 - MGP_BALBcJ_P0048269 Mllt1 protein_coding protein_coding MGP_BALBcJ_T0013191.1 MGP_BALBcJ_G0011288.1 mouse_genomes_project 17 20169097 20169545 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010161.1 MGP_BALBcJ_G0008286.1 mouse_genomes_project 17 24344552 24344644 - Gm25083 miRNA miRNA MGP_BALBcJ_T0006918.1 MGP_BALBcJ_G0005692.1 mouse_genomes_project 17 33245807 33247038 + Gm20506 lincRNA lincRNA MGP_BALBcJ_T0011398.1 MGP_BALBcJ_G0009523.1 mouse_genomes_project 17 15374465 15374751 + Gm23837 misc_RNA misc_RNA MGP_BALBcJ_T0046216.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24483532 24522296 - MGP_BALBcJ_P0046216 Rab40c protein_coding protein_coding MGP_BALBcJ_T0046217.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24483532 24522286 - MGP_BALBcJ_P0046217 Rab40c protein_coding protein_coding MGP_BALBcJ_T0046218.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24483532 24522358 - MGP_BALBcJ_P0046218 Rab40c protein_coding protein_coding MGP_BALBcJ_T0046219.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24483532 24522200 - MGP_BALBcJ_P0046219 Rab40c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046220.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24483535 24516276 - Rab40c protein_coding processed_transcript MGP_BALBcJ_T0046221.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24485046 24522150 - MGP_BALBcJ_P0046221 Rab40c protein_coding protein_coding MGP_BALBcJ_T0046222.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24485057 24522371 - MGP_BALBcJ_P0046222 Rab40c protein_coding protein_coding MGP_BALBcJ_T0046223.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24486181 24522334 - Rab40c protein_coding processed_transcript MGP_BALBcJ_T0046224.1 MGP_BALBcJ_G0023345.1 mouse_genomes_project 17 24486500 24522355 - MGP_BALBcJ_P0046224 Rab40c protein_coding protein_coding MGP_BALBcJ_T0048602.1 MGP_BALBcJ_G0024019.1 mouse_genomes_project 17 80470708 80521675 - MGP_BALBcJ_P0048602 Dhx57 protein_coding unknown_likely_coding MGP_BALBcJ_T0048603.1 MGP_BALBcJ_G0024019.1 mouse_genomes_project 17 80470711 80522300 - MGP_BALBcJ_P0048603 Dhx57 protein_coding protein_coding MGP_BALBcJ_T0013268.1 MGP_BALBcJ_G0011365.1 mouse_genomes_project 17 73353099 73354527 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045762.1 MGP_BALBcJ_G0023228.1 mouse_genomes_project 17 22155508 22157510 - MGP_BALBcJ_P0045762 Tnfrsf12a protein_coding protein_coding MGP_BALBcJ_T0045763.1 MGP_BALBcJ_G0023228.1 mouse_genomes_project 17 22155508 22157510 - MGP_BALBcJ_P0045763 Tnfrsf12a protein_coding protein_coding MGP_BALBcJ_T0045642.1 MGP_BALBcJ_G0023161.1 mouse_genomes_project 17 16870597 17419613 + MGP_BALBcJ_P0045642 protein_coding protein_coding MGP_BALBcJ_T0045643.1 MGP_BALBcJ_G0023161.1 mouse_genomes_project 17 17073663 17419613 + MGP_BALBcJ_P0045643 protein_coding protein_coding MGP_BALBcJ_T0047035.1 MGP_BALBcJ_G0023533.1 mouse_genomes_project 17 33259910 33265230 + MGP_BALBcJ_P0047035 H2-Ab1 protein_coding protein_coding MGP_BALBcJ_T0047036.1 MGP_BALBcJ_G0023533.1 mouse_genomes_project 17 33262944 33263878 + H2-Ab1 protein_coding retained_intron MGP_BALBcJ_T0047037.1 MGP_BALBcJ_G0023533.1 mouse_genomes_project 17 33264078 33265206 + H2-Ab1 protein_coding retained_intron MGP_BALBcJ_T0045710.1 MGP_BALBcJ_G0023210.1 mouse_genomes_project 17 20647604 20664759 + MGP_BALBcJ_P0045710 Zfp758 protein_coding protein_coding MGP_BALBcJ_T0045711.1 MGP_BALBcJ_G0023210.1 mouse_genomes_project 17 20647604 20664758 + MGP_BALBcJ_P0045711 Zfp758 protein_coding protein_coding MGP_BALBcJ_T0045712.1 MGP_BALBcJ_G0023210.1 mouse_genomes_project 17 20647606 20663794 + MGP_BALBcJ_P0045712 Zfp758 protein_coding protein_coding MGP_BALBcJ_T0045713.1 MGP_BALBcJ_G0023210.1 mouse_genomes_project 17 20647673 20664759 + MGP_BALBcJ_P0045713 Zfp758 protein_coding protein_coding MGP_BALBcJ_T0048557.1 MGP_BALBcJ_G0024000.1 mouse_genomes_project 17 79035113 79047840 + MGP_BALBcJ_P0048557 Gpatch11 protein_coding protein_coding MGP_BALBcJ_T0045997.1 MGP_BALBcJ_G0023297.1 mouse_genomes_project 17 23459160 23460193 + MGP_BALBcJ_P0045997 Nme3 protein_coding protein_coding MGP_BALBcJ_T0045998.1 MGP_BALBcJ_G0023297.1 mouse_genomes_project 17 23459165 23460006 + Nme3 protein_coding processed_transcript MGP_BALBcJ_T0045999.1 MGP_BALBcJ_G0023297.1 mouse_genomes_project 17 23459181 23459915 + Nme3 protein_coding retained_intron MGP_BALBcJ_T0046000.1 MGP_BALBcJ_G0023297.1 mouse_genomes_project 17 23459183 23460155 + Nme3 protein_coding retained_intron MGP_BALBcJ_T0046001.1 MGP_BALBcJ_G0023297.1 mouse_genomes_project 17 23459421 23460018 + Nme3 protein_coding retained_intron MGP_BALBcJ_T0047707.1 MGP_BALBcJ_G0023731.1 mouse_genomes_project 17 42488366 42522064 - MGP_BALBcJ_P0047707 Adgrf2 protein_coding protein_coding MGP_BALBcJ_T0047352.1 MGP_BALBcJ_G0023600.1 mouse_genomes_project 17 34703958 34708487 + MGP_BALBcJ_P0047352 Pou5f1 protein_coding protein_coding MGP_BALBcJ_T0047353.1 MGP_BALBcJ_G0023600.1 mouse_genomes_project 17 34705425 34707858 + MGP_BALBcJ_P0047353 Pou5f1 protein_coding protein_coding MGP_BALBcJ_T0047354.1 MGP_BALBcJ_G0023600.1 mouse_genomes_project 17 34706529 34707858 + MGP_BALBcJ_P0047354 Pou5f1 protein_coding protein_coding MGP_BALBcJ_T0047355.1 MGP_BALBcJ_G0023600.1 mouse_genomes_project 17 34706531 34707858 + MGP_BALBcJ_P0047355 Pou5f1 protein_coding protein_coding MGP_BALBcJ_T0047356.1 MGP_BALBcJ_G0023600.1 mouse_genomes_project 17 34706541 34707858 + MGP_BALBcJ_P0047356 Pou5f1 protein_coding protein_coding MGP_BALBcJ_T0047357.1 MGP_BALBcJ_G0023600.1 mouse_genomes_project 17 34706545 34707858 + MGP_BALBcJ_P0047357 Pou5f1 protein_coding protein_coding MGP_BALBcJ_T0048031.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47685049 47704252 - MGP_BALBcJ_P0048031 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048032.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47685049 47705702 - MGP_BALBcJ_P0048032 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048033.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47685057 47704302 - MGP_BALBcJ_P0048033 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048034.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47687182 47704269 - Mdfi protein_coding processed_transcript MGP_BALBcJ_T0048035.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47687300 47704180 - MGP_BALBcJ_P0048035 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048036.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47691032 47704272 - Mdfi protein_coding retained_intron MGP_BALBcJ_T0048037.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47692071 47704283 - MGP_BALBcJ_P0048037 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048038.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47692160 47704256 - MGP_BALBcJ_P0048038 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048039.1 MGP_BALBcJ_G0023820.1 mouse_genomes_project 17 47695678 47704241 - MGP_BALBcJ_P0048039 Mdfi protein_coding protein_coding MGP_BALBcJ_T0048048.1 MGP_BALBcJ_G0023822.1 mouse_genomes_project 17 47920948 47922500 - MGP_BALBcJ_P0048048 1700122O11Rik protein_coding protein_coding MGP_BALBcJ_T0099580.1 MGP_BALBcJ_G0037616.1 mouse_genomes_project 17 66164144 66164251 + Gm23264 snRNA snRNA MGP_BALBcJ_T0045922.1 MGP_BALBcJ_G0023271.1 mouse_genomes_project 17 23070641 23077158 - MGP_BALBcJ_P0045922 Rab26 protein_coding protein_coding MGP_BALBcJ_T0045923.1 MGP_BALBcJ_G0023271.1 mouse_genomes_project 17 23072493 23077320 - MGP_BALBcJ_P0045923 Rab26 protein_coding protein_coding MGP_BALBcJ_T0045924.1 MGP_BALBcJ_G0023271.1 mouse_genomes_project 17 23072504 23077144 - Rab26 protein_coding retained_intron MGP_BALBcJ_T0045925.1 MGP_BALBcJ_G0023271.1 mouse_genomes_project 17 23072760 23073388 - Rab26 protein_coding retained_intron MGP_BALBcJ_T0045926.1 MGP_BALBcJ_G0023271.1 mouse_genomes_project 17 23072982 23077642 - MGP_BALBcJ_P0045926 Rab26 protein_coding protein_coding MGP_BALBcJ_T0013250.1 MGP_BALBcJ_G0011347.1 mouse_genomes_project 17 53596307 53596960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047639.1 MGP_BALBcJ_G0023678.1 mouse_genomes_project 17 36936000 36938708 - MGP_BALBcJ_P0047639 H2-M2 protein_coding protein_coding MGP_BALBcJ_T0047640.1 MGP_BALBcJ_G0023678.1 mouse_genomes_project 17 36936148 36938709 - MGP_BALBcJ_P0047640 H2-M2 protein_coding protein_coding MGP_BALBcJ_T0048000.1 MGP_BALBcJ_G0023814.1 mouse_genomes_project 17 47551682 47553221 - MGP_BALBcJ_P0048000 Tomm6 protein_coding protein_coding MGP_BALBcJ_T0048002.1 MGP_BALBcJ_G0023814.1 mouse_genomes_project 17 47551776 47553424 - Tomm6 protein_coding retained_intron MGP_BALBcJ_T0048003.1 MGP_BALBcJ_G0023814.1 mouse_genomes_project 17 47551776 47553106 - MGP_BALBcJ_P0048003 Tomm6 protein_coding protein_coding MGP_BALBcJ_T0102356.1 MGP_BALBcJ_G0040172.1 mouse_genomes_project 17 36856928 36857767 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048556.1 MGP_BALBcJ_G0023999.1 mouse_genomes_project 17 78954572 79034979 - MGP_BALBcJ_P0048556 Heatr5b protein_coding protein_coding MGP_BALBcJ_T0013201.1 MGP_BALBcJ_G0011298.1 mouse_genomes_project 17 26252087 26252433 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013214.1 MGP_BALBcJ_G0011311.1 mouse_genomes_project 17 35453343 35453889 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046417.1 MGP_BALBcJ_G0023393.1 mouse_genomes_project 17 26641590 26649945 - MGP_BALBcJ_P0046417 Taf11 protein_coding protein_coding MGP_BALBcJ_T0046418.1 MGP_BALBcJ_G0023393.1 mouse_genomes_project 17 26641596 26648427 - MGP_BALBcJ_P0046418 Taf11 protein_coding protein_coding MGP_BALBcJ_T0046419.1 MGP_BALBcJ_G0023393.1 mouse_genomes_project 17 26642130 26643743 - Taf11 protein_coding processed_transcript MGP_BALBcJ_T0010174.1 MGP_BALBcJ_G0008299.1 mouse_genomes_project 17 27328279 27328340 - Mir6969 miRNA miRNA MGP_BALBcJ_T0098535.1 MGP_BALBcJ_G0036589.1 mouse_genomes_project 17 3208807 3208929 + n-R5s26 rRNA rRNA MGP_BALBcJ_T0048254.1 MGP_BALBcJ_G0023891.1 mouse_genomes_project 17 56543397 56556533 - MGP_BALBcJ_P0048254 Lonp1 protein_coding protein_coding MGP_BALBcJ_T0102357.1 MGP_BALBcJ_G0040173.1 mouse_genomes_project 17 36864547 36865474 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048608.1 MGP_BALBcJ_G0024023.1 mouse_genomes_project 17 80633782 80720133 - MGP_BALBcJ_P0048608 Sos1 protein_coding protein_coding MGP_BALBcJ_T0046250.1 MGP_BALBcJ_G0023352.1 mouse_genomes_project 17 24690242 24700118 - MGP_BALBcJ_P0046250 Decr2 protein_coding protein_coding MGP_BALBcJ_T0046251.1 MGP_BALBcJ_G0023352.1 mouse_genomes_project 17 24692566 24693599 - Decr2 protein_coding processed_transcript MGP_BALBcJ_T0046252.1 MGP_BALBcJ_G0023352.1 mouse_genomes_project 17 24693315 24700118 - Decr2 protein_coding retained_intron MGP_BALBcJ_T0046253.1 MGP_BALBcJ_G0023352.1 mouse_genomes_project 17 24693772 24700108 - Decr2 protein_coding processed_transcript MGP_BALBcJ_T0046254.1 MGP_BALBcJ_G0023352.1 mouse_genomes_project 17 24697242 24700147 - Decr2 protein_coding processed_transcript MGP_BALBcJ_T0017523.1 MGP_BALBcJ_G0015284.1 mouse_genomes_project 17 32546045 32560984 + Gm20507 processed_transcript processed_transcript MGP_BALBcJ_T0047967.1 MGP_BALBcJ_G0023806.1 mouse_genomes_project 17 47271022 47295328 - MGP_BALBcJ_P0047967 1700001C19Rik protein_coding protein_coding MGP_BALBcJ_T0047968.1 MGP_BALBcJ_G0023806.1 mouse_genomes_project 17 47271663 47280224 - MGP_BALBcJ_P0047968 1700001C19Rik protein_coding protein_coding MGP_BALBcJ_T0047969.1 MGP_BALBcJ_G0023806.1 mouse_genomes_project 17 47271671 47273000 - 1700001C19Rik protein_coding processed_transcript MGP_BALBcJ_T0047970.1 MGP_BALBcJ_G0023806.1 mouse_genomes_project 17 47271916 47295329 - 1700001C19Rik protein_coding processed_transcript MGP_BALBcJ_T0046881.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32749252 32763021 + MGP_BALBcJ_P0046881 Ndufa7 protein_coding protein_coding MGP_BALBcJ_T0046882.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32749255 32750783 + Ndufa7 protein_coding retained_intron MGP_BALBcJ_T0046883.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32749265 32763014 + MGP_BALBcJ_P0046883 Ndufa7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046884.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32749306 32750506 + Ndufa7 protein_coding retained_intron MGP_BALBcJ_T0046885.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32749704 32762887 + Ndufa7 protein_coding processed_transcript MGP_BALBcJ_T0046886.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32750280 32762891 + Ndufa7 protein_coding processed_transcript MGP_BALBcJ_T0046887.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32753770 32763014 + Ndufa7 protein_coding processed_transcript MGP_BALBcJ_T0046888.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32754005 32762999 + Ndufa7 protein_coding processed_transcript MGP_BALBcJ_T0046889.1 MGP_BALBcJ_G0023502.1 mouse_genomes_project 17 32754039 32763019 + Ndufa7 protein_coding retained_intron MGP_BALBcJ_T0046094.1 MGP_BALBcJ_G0023313.1 mouse_genomes_project 17 23873510 23875278 + MGP_BALBcJ_P0046094 Prss34 protein_coding protein_coding MGP_BALBcJ_T0003710.1 MGP_BALBcJ_G0003343.1 mouse_genomes_project 17 25194387 25209482 - antisense antisense MGP_BALBcJ_T0010184.1 MGP_BALBcJ_G0008309.1 mouse_genomes_project 17 33958088 33958152 - Mir6972 miRNA miRNA MGP_BALBcJ_T0047717.1 MGP_BALBcJ_G0023737.1 mouse_genomes_project 17 43320178 43329450 - MGP_BALBcJ_P0047717 Ankrd66 protein_coding protein_coding MGP_BALBcJ_T0046530.1 MGP_BALBcJ_G0023414.1 mouse_genomes_project 17 27648897 27683423 + MGP_BALBcJ_P0046530 Pnpla1 protein_coding protein_coding MGP_BALBcJ_T0046531.1 MGP_BALBcJ_G0023414.1 mouse_genomes_project 17 27648897 27683423 + MGP_BALBcJ_P0046531 Pnpla1 protein_coding protein_coding MGP_BALBcJ_T0045647.1 MGP_BALBcJ_G0023165.1 mouse_genomes_project 17 17614351 17642186 + MGP_BALBcJ_P0045647 Vmn2r101 protein_coding protein_coding MGP_BALBcJ_T0048297.1 MGP_BALBcJ_G0023918.1 mouse_genomes_project 17 57172947 57197061 - MGP_BALBcJ_P0048297 C3 protein_coding protein_coding MGP_BALBcJ_T0048298.1 MGP_BALBcJ_G0023918.1 mouse_genomes_project 17 57172984 57191765 - MGP_BALBcJ_P0048298 C3 protein_coding protein_coding MGP_BALBcJ_T0048299.1 MGP_BALBcJ_G0023918.1 mouse_genomes_project 17 57175194 57196928 - MGP_BALBcJ_P0048299 C3 protein_coding protein_coding MGP_BALBcJ_T0048300.1 MGP_BALBcJ_G0023918.1 mouse_genomes_project 17 57184727 57188910 - C3 protein_coding processed_transcript MGP_BALBcJ_T0013262.1 MGP_BALBcJ_G0011359.1 mouse_genomes_project 17 63373652 63374143 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017533.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34054138 34055145 - 1110038B12Rik processed_transcript retained_intron MGP_BALBcJ_T0017534.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34054141 34056357 - 1110038B12Rik processed_transcript retained_intron MGP_BALBcJ_T0017535.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34054141 34056349 - 1110038B12Rik processed_transcript lincRNA MGP_BALBcJ_T0017536.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34054141 34056372 - 1110038B12Rik processed_transcript lincRNA MGP_BALBcJ_T0017537.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34054142 34056335 - 1110038B12Rik processed_transcript retained_intron MGP_BALBcJ_T0017538.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34054143 34056369 - 1110038B12Rik processed_transcript lincRNA MGP_BALBcJ_T0017539.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34055346 34056369 - 1110038B12Rik processed_transcript retained_intron MGP_BALBcJ_T0017540.1 MGP_BALBcJ_G0015289.1 mouse_genomes_project 17 34055494 34056363 - 1110038B12Rik processed_transcript retained_intron MGP_BALBcJ_T0045406.1 MGP_BALBcJ_G0023087.1 mouse_genomes_project 17 3798618 3833118 + MGP_BALBcJ_P0045406 protein_coding protein_coding MGP_BALBcJ_T0046931.1 MGP_BALBcJ_G0023511.1 mouse_genomes_project 17 32905183 32906734 - MGP_BALBcJ_P0046931 B3galt4 protein_coding protein_coding MGP_BALBcJ_T0100853.1 MGP_BALBcJ_G0038889.1 mouse_genomes_project 17 87770503 87770637 - Gm26005 snoRNA snoRNA MGP_BALBcJ_T0006960.1 MGP_BALBcJ_G0005722.1 mouse_genomes_project 17 79551657 79554988 + Gm17315 lincRNA lincRNA MGP_BALBcJ_T0010152.1 MGP_BALBcJ_G0008277.1 mouse_genomes_project 17 15427387 15427504 - Gm25927 miRNA miRNA MGP_BALBcJ_T0006935.1 MGP_BALBcJ_G0005708.1 mouse_genomes_project 17 49029357 49030622 - 1700008K24Rik lincRNA lincRNA MGP_BALBcJ_T0006936.1 MGP_BALBcJ_G0005708.1 mouse_genomes_project 17 49029357 49030609 - 1700008K24Rik lincRNA lincRNA MGP_BALBcJ_T0006937.1 MGP_BALBcJ_G0005708.1 mouse_genomes_project 17 49029359 49030530 - 1700008K24Rik lincRNA lincRNA MGP_BALBcJ_T0006938.1 MGP_BALBcJ_G0005708.1 mouse_genomes_project 17 49029359 49030587 - 1700008K24Rik lincRNA lincRNA MGP_BALBcJ_T0006939.1 MGP_BALBcJ_G0005708.1 mouse_genomes_project 17 49029467 49030629 - 1700008K24Rik lincRNA lincRNA MGP_BALBcJ_T0100833.1 MGP_BALBcJ_G0038869.1 mouse_genomes_project 17 34054852 34054918 - Snord52 snoRNA snoRNA MGP_BALBcJ_T0045727.1 MGP_BALBcJ_G0023217.1 mouse_genomes_project 17 21543130 21562549 - MGP_BALBcJ_P0045727 Zfp40 protein_coding protein_coding MGP_BALBcJ_T0045728.1 MGP_BALBcJ_G0023217.1 mouse_genomes_project 17 21543158 21562558 - Zfp40 protein_coding processed_transcript MGP_BALBcJ_T0045729.1 MGP_BALBcJ_G0023217.1 mouse_genomes_project 17 21546551 21562599 - Zfp40 protein_coding processed_transcript MGP_BALBcJ_T0045730.1 MGP_BALBcJ_G0023217.1 mouse_genomes_project 17 21560693 21562600 - MGP_BALBcJ_P0045730 Zfp40 protein_coding protein_coding MGP_BALBcJ_T0048343.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65849576 65879714 + MGP_BALBcJ_P0048343 Ppp4r1 protein_coding protein_coding MGP_BALBcJ_T0048344.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65850264 65879940 + MGP_BALBcJ_P0048344 Ppp4r1 protein_coding protein_coding MGP_BALBcJ_T0048345.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65850264 65912833 + MGP_BALBcJ_P0048345 Ppp4r1 protein_coding protein_coding MGP_BALBcJ_T0048346.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65850264 65912832 + MGP_BALBcJ_P0048346 Ppp4r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048347.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65850264 65912837 + MGP_BALBcJ_P0048347 Ppp4r1 protein_coding protein_coding MGP_BALBcJ_T0048348.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65866499 65876876 + Ppp4r1 protein_coding processed_transcript MGP_BALBcJ_T0048349.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65869193 65876849 + Ppp4r1 protein_coding retained_intron MGP_BALBcJ_T0048350.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65883248 65897659 + Ppp4r1 protein_coding processed_transcript MGP_BALBcJ_T0048351.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65886399 65912767 + Ppp4r1 protein_coding processed_transcript MGP_BALBcJ_T0048352.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65891205 65899762 + MGP_BALBcJ_P0048352 Ppp4r1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048353.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65895621 65899698 + Ppp4r1 protein_coding retained_intron MGP_BALBcJ_T0048354.1 MGP_BALBcJ_G0023939.1 mouse_genomes_project 17 65908799 65909892 + MGP_BALBcJ_P0048354 Ppp4r1 protein_coding protein_coding MGP_BALBcJ_T0046535.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27743430 27755578 + MGP_BALBcJ_P0046535 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0046536.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27743916 27761006 + MGP_BALBcJ_P0046536 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0046537.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27743946 27759387 + MGP_BALBcJ_P0046537 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0046538.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27743983 27758550 + Kctd20 protein_coding processed_transcript MGP_BALBcJ_T0046539.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27744079 27759387 + MGP_BALBcJ_P0046539 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0046540.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27744168 27756537 + MGP_BALBcJ_P0046540 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0046541.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27744696 27759395 + MGP_BALBcJ_P0046541 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0046542.1 MGP_BALBcJ_G0023417.1 mouse_genomes_project 17 27744696 27759393 + MGP_BALBcJ_P0046542 Kctd20 protein_coding protein_coding MGP_BALBcJ_T0099581.1 MGP_BALBcJ_G0037617.1 mouse_genomes_project 17 72665492 72665622 - Gm24736 snRNA snRNA MGP_BALBcJ_T0010151.1 MGP_BALBcJ_G0008276.1 mouse_genomes_project 17 15427232 15427302 + Mir99b miRNA miRNA MGP_BALBcJ_T0046868.1 MGP_BALBcJ_G0023500.1 mouse_genomes_project 17 32734970 32747585 + MGP_BALBcJ_P0046868 Kank3 protein_coding protein_coding MGP_BALBcJ_T0046869.1 MGP_BALBcJ_G0023500.1 mouse_genomes_project 17 32734973 32747584 + MGP_BALBcJ_P0046869 Kank3 protein_coding protein_coding MGP_BALBcJ_T0046870.1 MGP_BALBcJ_G0023500.1 mouse_genomes_project 17 32734973 32747581 + MGP_BALBcJ_P0046870 Kank3 protein_coding protein_coding MGP_BALBcJ_T0046871.1 MGP_BALBcJ_G0023500.1 mouse_genomes_project 17 32734979 32746825 + Kank3 protein_coding retained_intron MGP_BALBcJ_T0046873.1 MGP_BALBcJ_G0023500.1 mouse_genomes_project 17 32746495 32746942 + Kank3 protein_coding retained_intron MGP_BALBcJ_T0046874.1 MGP_BALBcJ_G0023500.1 mouse_genomes_project 17 32746809 32747584 + MGP_BALBcJ_P0046874 Kank3 protein_coding protein_coding MGP_BALBcJ_T0098539.1 MGP_BALBcJ_G0036593.1 mouse_genomes_project 17 47138316 47138389 + Gm26216 rRNA rRNA MGP_BALBcJ_T0045485.1 MGP_BALBcJ_G0023112.1 mouse_genomes_project 17 9495577 9583174 - MGP_BALBcJ_P0045485 Map3k4 protein_coding protein_coding MGP_BALBcJ_T0003735.1 MGP_BALBcJ_G0003361.1 mouse_genomes_project 17 33646908 33647334 + Gm20463 antisense antisense MGP_BALBcJ_T0045679.1 MGP_BALBcJ_G0023191.1 mouse_genomes_project 17 19492536 19493486 + MGP_BALBcJ_P0045679 Vmn1r237 protein_coding protein_coding MGP_BALBcJ_T0045840.1 MGP_BALBcJ_G0023256.1 mouse_genomes_project 17 22693465 22696480 - Atp6v0c protein_coding processed_transcript MGP_BALBcJ_T0045841.1 MGP_BALBcJ_G0023256.1 mouse_genomes_project 17 22693465 22698918 - MGP_BALBcJ_P0045841 Atp6v0c protein_coding protein_coding MGP_BALBcJ_T0045842.1 MGP_BALBcJ_G0023256.1 mouse_genomes_project 17 22693917 22699134 - MGP_BALBcJ_P0045842 Atp6v0c protein_coding protein_coding MGP_BALBcJ_T0045843.1 MGP_BALBcJ_G0023256.1 mouse_genomes_project 17 22694184 22699105 - MGP_BALBcJ_P0045843 Atp6v0c protein_coding protein_coding MGP_BALBcJ_T0045844.1 MGP_BALBcJ_G0023256.1 mouse_genomes_project 17 22694302 22698523 - Atp6v0c protein_coding processed_transcript MGP_BALBcJ_T0045845.1 MGP_BALBcJ_G0023256.1 mouse_genomes_project 17 22694306 22699159 - MGP_BALBcJ_P0045845 Atp6v0c protein_coding protein_coding MGP_BALBcJ_T0048670.1 MGP_BALBcJ_G0024051.1 mouse_genomes_project 17 86442034 86941020 + MGP_BALBcJ_P0048670 Prkce protein_coding protein_coding MGP_BALBcJ_T0048671.1 MGP_BALBcJ_G0024051.1 mouse_genomes_project 17 86442068 86451762 + MGP_BALBcJ_P0048671 Prkce protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048672.1 MGP_BALBcJ_G0024051.1 mouse_genomes_project 17 86442423 86938513 + MGP_BALBcJ_P0048672 Prkce protein_coding protein_coding MGP_BALBcJ_T0048673.1 MGP_BALBcJ_G0024051.1 mouse_genomes_project 17 86771114 86776964 + Prkce protein_coding retained_intron MGP_BALBcJ_T0048674.1 MGP_BALBcJ_G0024051.1 mouse_genomes_project 17 86773902 86777309 + Prkce protein_coding retained_intron MGP_BALBcJ_T0047648.1 MGP_BALBcJ_G0023684.1 mouse_genomes_project 17 37071627 37092750 - MGP_BALBcJ_P0047648 Olfr126 protein_coding protein_coding MGP_BALBcJ_T0045771.1 MGP_BALBcJ_G0023232.1 mouse_genomes_project 17 22205390 22215726 + MGP_BALBcJ_P0045771 Pkmyt1 protein_coding protein_coding MGP_BALBcJ_T0045641.1 MGP_BALBcJ_G0023160.1 mouse_genomes_project 17 16863924 16885427 + MGP_BALBcJ_P0045641 protein_coding protein_coding MGP_BALBcJ_T0048096.1 MGP_BALBcJ_G0023838.1 mouse_genomes_project 17 48845234 49013945 + MGP_BALBcJ_P0048096 Lrfn2 protein_coding protein_coding MGP_BALBcJ_T0045868.1 MGP_BALBcJ_G0023260.1 mouse_genomes_project 17 22795407 22886497 - MGP_BALBcJ_P0045868 Abca17 protein_coding protein_coding MGP_BALBcJ_T0045869.1 MGP_BALBcJ_G0023260.1 mouse_genomes_project 17 22795427 22882720 - MGP_BALBcJ_P0045869 Abca17 protein_coding protein_coding MGP_BALBcJ_T0046813.1 MGP_BALBcJ_G0023490.1 mouse_genomes_project 17 32288907 32319415 - Zfp101 protein_coding processed_transcript MGP_BALBcJ_T0046814.1 MGP_BALBcJ_G0023490.1 mouse_genomes_project 17 32304720 32319678 - MGP_BALBcJ_P0046814 Zfp101 protein_coding protein_coding MGP_BALBcJ_T0046815.1 MGP_BALBcJ_G0023490.1 mouse_genomes_project 17 32306820 32319394 - MGP_BALBcJ_P0046815 Zfp101 protein_coding protein_coding MGP_BALBcJ_T0046816.1 MGP_BALBcJ_G0023490.1 mouse_genomes_project 17 32307530 32319660 - MGP_BALBcJ_P0046816 Zfp101 protein_coding protein_coding MGP_BALBcJ_T0046817.1 MGP_BALBcJ_G0023490.1 mouse_genomes_project 17 32310385 32319642 - Zfp101 protein_coding processed_transcript MGP_BALBcJ_T0006927.1 MGP_BALBcJ_G0005701.1 mouse_genomes_project 17 36613665 36629774 - Gm20497 lincRNA lincRNA MGP_BALBcJ_T0047736.1 MGP_BALBcJ_G0023744.1 mouse_genomes_project 17 43872763 43882248 - MGP_BALBcJ_P0047736 Enpp4 protein_coding protein_coding MGP_BALBcJ_T0047737.1 MGP_BALBcJ_G0023744.1 mouse_genomes_project 17 43872771 43882203 - MGP_BALBcJ_P0047737 Enpp4 protein_coding protein_coding MGP_BALBcJ_T0010157.1 MGP_BALBcJ_G0008282.1 mouse_genomes_project 17 22765293 22765371 - Mir5134 miRNA miRNA MGP_BALBcJ_T0047752.1 MGP_BALBcJ_G0023747.1 mouse_genomes_project 17 44562896 44906903 + MGP_BALBcJ_P0047752 Supt3 protein_coding protein_coding MGP_BALBcJ_T0047753.1 MGP_BALBcJ_G0023747.1 mouse_genomes_project 17 44563069 44718315 + Supt3 protein_coding processed_transcript MGP_BALBcJ_T0047754.1 MGP_BALBcJ_G0023747.1 mouse_genomes_project 17 44563140 44906899 + MGP_BALBcJ_P0047754 Supt3 protein_coding protein_coding MGP_BALBcJ_T0047755.1 MGP_BALBcJ_G0023747.1 mouse_genomes_project 17 44573223 44906892 + MGP_BALBcJ_P0047755 Supt3 protein_coding protein_coding MGP_BALBcJ_T0045613.1 MGP_BALBcJ_G0023147.1 mouse_genomes_project 17 15114186 15203164 - MGP_BALBcJ_P0045613 Lnpep protein_coding protein_coding MGP_BALBcJ_T0048687.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87563888 87575597 - MGP_BALBcJ_P0048687 Mcfd2 protein_coding protein_coding MGP_BALBcJ_T0048688.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87563890 87575566 - MGP_BALBcJ_P0048688 Mcfd2 protein_coding protein_coding MGP_BALBcJ_T0048689.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87565018 87575542 - MGP_BALBcJ_P0048689 Mcfd2 protein_coding protein_coding MGP_BALBcJ_T0048690.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87565200 87575557 - MGP_BALBcJ_P0048690 Mcfd2 protein_coding protein_coding MGP_BALBcJ_T0048691.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87565988 87575536 - MGP_BALBcJ_P0048691 Mcfd2 protein_coding protein_coding MGP_BALBcJ_T0048692.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87566461 87575542 - MGP_BALBcJ_P0048692 Mcfd2 protein_coding protein_coding MGP_BALBcJ_T0048693.1 MGP_BALBcJ_G0024060.1 mouse_genomes_project 17 87568198 87575525 - Mcfd2 protein_coding processed_transcript MGP_BALBcJ_T0048615.1 MGP_BALBcJ_G0024029.1 mouse_genomes_project 17 81620707 81887096 - MGP_BALBcJ_P0048615 Slc8a1 protein_coding protein_coding MGP_BALBcJ_T0048616.1 MGP_BALBcJ_G0024029.1 mouse_genomes_project 17 81620707 81887096 - MGP_BALBcJ_P0048616 Slc8a1 protein_coding protein_coding MGP_BALBcJ_T0048617.1 MGP_BALBcJ_G0024029.1 mouse_genomes_project 17 81620707 81887096 - MGP_BALBcJ_P0048617 Slc8a1 protein_coding protein_coding MGP_BALBcJ_T0048618.1 MGP_BALBcJ_G0024029.1 mouse_genomes_project 17 81620707 81906534 - MGP_BALBcJ_P0048618 Slc8a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0045766.1 MGP_BALBcJ_G0023231.1 mouse_genomes_project 17 22181737 22201872 - protein_coding retained_intron MGP_BALBcJ_T0045767.1 MGP_BALBcJ_G0023231.1 mouse_genomes_project 17 22181737 22199806 - MGP_BALBcJ_P0045767 protein_coding protein_coding MGP_BALBcJ_T0045768.1 MGP_BALBcJ_G0023231.1 mouse_genomes_project 17 22181737 22201872 - MGP_BALBcJ_P0045768 protein_coding protein_coding MGP_BALBcJ_T0045769.1 MGP_BALBcJ_G0023231.1 mouse_genomes_project 17 22182302 22201029 - protein_coding retained_intron MGP_BALBcJ_T0045770.1 MGP_BALBcJ_G0023231.1 mouse_genomes_project 17 22182302 22183584 - protein_coding retained_intron MGP_BALBcJ_T0047110.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33662433 33672850 - MGP_BALBcJ_P0047110 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047111.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33662434 33672792 - MGP_BALBcJ_P0047111 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047112.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33662435 33672563 - MGP_BALBcJ_P0047112 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047113.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33663000 33673425 - MGP_BALBcJ_P0047113 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047114.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33663000 33673939 - MGP_BALBcJ_P0047114 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047115.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33663000 33673385 - MGP_BALBcJ_P0047115 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047116.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33663085 33672343 - MGP_BALBcJ_P0047116 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047117.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33668610 33674410 - MGP_BALBcJ_P0047117 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047118.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33668806 33672841 - MGP_BALBcJ_P0047118 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0047119.1 MGP_BALBcJ_G0023549.1 mouse_genomes_project 17 33671903 33672565 - MGP_BALBcJ_P0047119 Ppt2 protein_coding protein_coding MGP_BALBcJ_T0048612.1 MGP_BALBcJ_G0024026.1 mouse_genomes_project 17 81181359 81183365 - MGP_BALBcJ_P0048612 protein_coding protein_coding MGP_BALBcJ_T0047686.1 MGP_BALBcJ_G0023717.1 mouse_genomes_project 17 40307176 40313929 + MGP_BALBcJ_P0047686 Esp6 protein_coding protein_coding MGP_BALBcJ_T0099578.1 MGP_BALBcJ_G0037614.1 mouse_genomes_project 17 59500806 59500913 - Gm23203 snRNA snRNA MGP_BALBcJ_T0013256.1 MGP_BALBcJ_G0011353.1 mouse_genomes_project 17 53853508 53854635 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003761.1 MGP_BALBcJ_G0003382.1 mouse_genomes_project 17 49813347 49814591 - Gm16554 antisense antisense MGP_BALBcJ_T0006930.1 MGP_BALBcJ_G0005704.1 mouse_genomes_project 17 45528853 45577159 + lincRNA lincRNA MGP_BALBcJ_T0006931.1 MGP_BALBcJ_G0005704.1 mouse_genomes_project 17 45551396 45584466 + lincRNA lincRNA MGP_BALBcJ_T0047649.1 MGP_BALBcJ_G0023685.1 mouse_genomes_project 17 37089283 37090371 - MGP_BALBcJ_P0047649 Olfr116 protein_coding protein_coding MGP_BALBcJ_T0047297.1 MGP_BALBcJ_G0023587.1 mouse_genomes_project 17 34238641 34239182 + D17H6S53E protein_coding retained_intron MGP_BALBcJ_T0047298.1 MGP_BALBcJ_G0023587.1 mouse_genomes_project 17 34238654 34241124 + MGP_BALBcJ_P0047298 D17H6S53E protein_coding protein_coding MGP_BALBcJ_T0048138.1 MGP_BALBcJ_G0023850.1 mouse_genomes_project 17 53395595 53428652 - MGP_BALBcJ_P0048138 Pp2d1 protein_coding protein_coding MGP_BALBcJ_T0006951.1 MGP_BALBcJ_G0005715.1 mouse_genomes_project 17 69518407 69542336 - A930029G22Rik lincRNA lincRNA MGP_BALBcJ_T0047647.1 MGP_BALBcJ_G0023683.1 mouse_genomes_project 17 37055641 37056641 - MGP_BALBcJ_P0047647 Olfr114 protein_coding protein_coding MGP_BALBcJ_T0048291.1 MGP_BALBcJ_G0023912.1 mouse_genomes_project 17 57030583 57043039 - MGP_BALBcJ_P0048291 Dennd1c protein_coding protein_coding MGP_BALBcJ_T0003747.1 MGP_BALBcJ_G0003373.1 mouse_genomes_project 17 43375951 43379121 - 1700071M16Rik antisense antisense MGP_BALBcJ_T0003748.1 MGP_BALBcJ_G0003373.1 mouse_genomes_project 17 43376144 43379121 - 1700071M16Rik antisense antisense MGP_BALBcJ_T0003749.1 MGP_BALBcJ_G0003373.1 mouse_genomes_project 17 43378771 43380043 - 1700071M16Rik antisense antisense MGP_BALBcJ_T0003750.1 MGP_BALBcJ_G0003373.1 mouse_genomes_project 17 43378771 43380053 - 1700071M16Rik antisense antisense MGP_BALBcJ_T0099574.1 MGP_BALBcJ_G0037610.1 mouse_genomes_project 17 49210506 49210667 + Gm22978 snRNA snRNA MGP_BALBcJ_T0045794.1 MGP_BALBcJ_G0023240.1 mouse_genomes_project 17 22316788 22324444 - MGP_BALBcJ_P0045794 Prss41 protein_coding protein_coding MGP_BALBcJ_T0045795.1 MGP_BALBcJ_G0023240.1 mouse_genomes_project 17 22316788 22324427 - MGP_BALBcJ_P0045795 Prss41 protein_coding protein_coding MGP_BALBcJ_T0045796.1 MGP_BALBcJ_G0023240.1 mouse_genomes_project 17 22321374 22324444 - MGP_BALBcJ_P0045796 Prss41 protein_coding protein_coding MGP_BALBcJ_T0045797.1 MGP_BALBcJ_G0023240.1 mouse_genomes_project 17 22322503 22324421 - Prss41 protein_coding retained_intron MGP_BALBcJ_T0046242.1 MGP_BALBcJ_G0023350.1 mouse_genomes_project 17 24564081 24593076 - MGP_BALBcJ_P0046242 Capn15 protein_coding unknown_likely_coding MGP_BALBcJ_T0046243.1 MGP_BALBcJ_G0023350.1 mouse_genomes_project 17 24565275 24593056 - MGP_BALBcJ_P0046243 Capn15 protein_coding protein_coding MGP_BALBcJ_T0101864.1 MGP_BALBcJ_G0039776.1 mouse_genomes_project 17 30932263 30947277 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101865.1 MGP_BALBcJ_G0039776.1 mouse_genomes_project 17 30932618 30954980 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101866.1 MGP_BALBcJ_G0039776.1 mouse_genomes_project 17 30934866 30962723 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0003716.1 MGP_BALBcJ_G0003349.1 mouse_genomes_project 17 27645622 27649990 - Pnpla1os antisense antisense MGP_BALBcJ_T0011405.1 MGP_BALBcJ_G0009530.1 mouse_genomes_project 17 36440974 36441222 + Gm22388 misc_RNA misc_RNA MGP_BALBcJ_T0010179.1 MGP_BALBcJ_G0008304.1 mouse_genomes_project 17 32989917 32990027 - Mir219a-1 miRNA miRNA MGP_BALBcJ_T0046973.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32996740 33003484 + MGP_BALBcJ_P0046973 Rxrb protein_coding protein_coding MGP_BALBcJ_T0046974.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32997111 33002791 + MGP_BALBcJ_P0046974 Rxrb protein_coding protein_coding MGP_BALBcJ_T0046975.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32997124 32999134 + MGP_BALBcJ_P0046975 Rxrb protein_coding protein_coding MGP_BALBcJ_T0046976.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32997303 33002906 + MGP_BALBcJ_P0046976 Rxrb protein_coding protein_coding MGP_BALBcJ_T0046977.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32997329 33003484 + MGP_BALBcJ_P0046977 Rxrb protein_coding protein_coding MGP_BALBcJ_T0046978.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32998481 33001102 + Rxrb protein_coding retained_intron MGP_BALBcJ_T0046979.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 32998839 33001465 + Rxrb protein_coding retained_intron MGP_BALBcJ_T0046980.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 33001414 33002365 + Rxrb protein_coding retained_intron MGP_BALBcJ_T0046981.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 33001458 33002398 + Rxrb protein_coding retained_intron MGP_BALBcJ_T0046982.1 MGP_BALBcJ_G0023520.1 mouse_genomes_project 17 33001554 33002625 + Rxrb protein_coding retained_intron MGP_BALBcJ_T0013197.1 MGP_BALBcJ_G0011294.1 mouse_genomes_project 17 23899392 23900554 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045447.1 MGP_BALBcJ_G0023102.1 mouse_genomes_project 17 5636619 5640353 + MGP_BALBcJ_P0045447 Prr18 protein_coding protein_coding MGP_BALBcJ_T0045448.1 MGP_BALBcJ_G0023102.1 mouse_genomes_project 17 5636952 5640353 + MGP_BALBcJ_P0045448 Prr18 protein_coding protein_coding MGP_BALBcJ_T0046024.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23578592 23655126 + MGP_BALBcJ_P0046024 Ift140 protein_coding protein_coding MGP_BALBcJ_T0046025.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23578892 23661864 + MGP_BALBcJ_P0046025 Ift140 protein_coding protein_coding MGP_BALBcJ_T0046026.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23578900 23581413 + Ift140 protein_coding processed_transcript MGP_BALBcJ_T0046027.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23588505 23659100 + Ift140 protein_coding retained_intron MGP_BALBcJ_T0046028.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23588741 23599836 + MGP_BALBcJ_P0046028 Ift140 protein_coding protein_coding MGP_BALBcJ_T0046029.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23607222 23649512 + Ift140 protein_coding processed_transcript MGP_BALBcJ_T0046030.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23607271 23661872 + Ift140 protein_coding processed_transcript MGP_BALBcJ_T0046033.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23648368 23661867 + MGP_BALBcJ_P0046033 Ift140 protein_coding unknown_likely_coding MGP_BALBcJ_T0046034.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23648377 23661867 + MGP_BALBcJ_P0046034 Ift140 protein_coding unknown_likely_coding MGP_BALBcJ_T0046035.1 MGP_BALBcJ_G0023300.1 mouse_genomes_project 17 23652177 23655469 + Ift140 protein_coding retained_intron MGP_BALBcJ_T0013222.1 MGP_BALBcJ_G0011319.1 mouse_genomes_project 17 35595344 35595614 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046894.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32864910 32866920 + MGP_BALBcJ_P0046894 Daxx protein_coding protein_coding MGP_BALBcJ_T0046895.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32864941 32871066 + MGP_BALBcJ_P0046895 Daxx protein_coding protein_coding MGP_BALBcJ_T0046896.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32864994 32867009 + MGP_BALBcJ_P0046896 Daxx protein_coding protein_coding MGP_BALBcJ_T0046897.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32865011 32870993 + MGP_BALBcJ_P0046897 Daxx protein_coding protein_coding MGP_BALBcJ_T0046898.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32865097 32871058 + MGP_BALBcJ_P0046898 Daxx protein_coding protein_coding MGP_BALBcJ_T0046899.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32865773 32867394 + Daxx protein_coding retained_intron MGP_BALBcJ_T0046900.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32865922 32871058 + MGP_BALBcJ_P0046900 Daxx protein_coding protein_coding MGP_BALBcJ_T0046901.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32868243 32869474 + Daxx protein_coding processed_transcript MGP_BALBcJ_T0046902.1 MGP_BALBcJ_G0023505.1 mouse_genomes_project 17 32869033 32870993 + Daxx protein_coding processed_transcript MGP_BALBcJ_T0098855.1 MGP_BALBcJ_G0036903.1 mouse_genomes_project 17 73801321 73805951 - D630014O11Rik sense_intronic sense_intronic MGP_BALBcJ_T0017501.1 MGP_BALBcJ_G0015273.1 mouse_genomes_project 17 5668250 5718018 + T2 processed_transcript processed_transcript MGP_BALBcJ_T0017502.1 MGP_BALBcJ_G0015273.1 mouse_genomes_project 17 5692195 5718018 + T2 processed_transcript processed_transcript MGP_BALBcJ_T0047568.1 MGP_BALBcJ_G0023650.1 mouse_genomes_project 17 36301975 36310459 - MGP_BALBcJ_P0047568 Trim40 protein_coding protein_coding MGP_BALBcJ_T0047569.1 MGP_BALBcJ_G0023650.1 mouse_genomes_project 17 36302222 36309898 - MGP_BALBcJ_P0047569 Trim40 protein_coding protein_coding MGP_BALBcJ_T0047570.1 MGP_BALBcJ_G0023650.1 mouse_genomes_project 17 36303319 36310537 - Trim40 protein_coding retained_intron MGP_BALBcJ_T0047571.1 MGP_BALBcJ_G0023650.1 mouse_genomes_project 17 36309629 36310526 - Trim40 protein_coding processed_transcript MGP_BALBcJ_T0003694.1 MGP_BALBcJ_G0003334.1 mouse_genomes_project 17 7781206 7854178 + Gm16168 antisense antisense MGP_BALBcJ_T0003695.1 MGP_BALBcJ_G0003334.1 mouse_genomes_project 17 7781213 7837377 + Gm16168 antisense antisense MGP_BALBcJ_T0045650.1 MGP_BALBcJ_G0023168.1 mouse_genomes_project 17 18067702 18087118 - MGP_BALBcJ_P0045650 Vmn2r104 protein_coding protein_coding MGP_BALBcJ_T0000989.1 MGP_BALBcJ_G0000917.1 mouse_genomes_project 17 54131216 54131542 + TEC TEC MGP_BALBcJ_T0048240.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56513003 56524707 + protein_coding retained_intron MGP_BALBcJ_T0048241.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56513152 56535316 + MGP_BALBcJ_P0048241 protein_coding protein_coding MGP_BALBcJ_T0048242.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56513160 56521904 + MGP_BALBcJ_P0048242 protein_coding protein_coding MGP_BALBcJ_T0048243.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56513237 56535391 + MGP_BALBcJ_P0048243 protein_coding protein_coding MGP_BALBcJ_T0048244.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56517018 56530409 + MGP_BALBcJ_P0048244 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048245.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56522697 56524695 + protein_coding retained_intron MGP_BALBcJ_T0048246.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56525953 56535377 + protein_coding retained_intron MGP_BALBcJ_T0048247.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56530565 56533505 + protein_coding retained_intron MGP_BALBcJ_T0048248.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56532066 56533640 + protein_coding retained_intron MGP_BALBcJ_T0048249.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56533455 56534750 + protein_coding retained_intron MGP_BALBcJ_T0048250.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56534318 56535391 + protein_coding retained_intron MGP_BALBcJ_T0048251.1 MGP_BALBcJ_G0023888.1 mouse_genomes_project 17 56534836 56535371 + protein_coding retained_intron MGP_BALBcJ_T0045780.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22270073 22288246 + MGP_BALBcJ_P0045780 Srrm2 protein_coding protein_coding MGP_BALBcJ_T0045781.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22282914 22304909 + MGP_BALBcJ_P0045781 Srrm2 protein_coding protein_coding MGP_BALBcJ_T0045782.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22282948 22304914 + MGP_BALBcJ_P0045782 Srrm2 protein_coding protein_coding MGP_BALBcJ_T0045783.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22287647 22290208 + MGP_BALBcJ_P0045783 Srrm2 protein_coding protein_coding MGP_BALBcJ_T0045784.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22287827 22288438 + Srrm2 protein_coding retained_intron MGP_BALBcJ_T0045785.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22291970 22292898 + MGP_BALBcJ_P0045785 Srrm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045786.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22292198 22296679 + Srrm2 protein_coding retained_intron MGP_BALBcJ_T0045787.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22299494 22302715 + Srrm2 protein_coding processed_transcript MGP_BALBcJ_T0045788.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22301573 22302847 + MGP_BALBcJ_P0045788 Srrm2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045789.1 MGP_BALBcJ_G0023237.1 mouse_genomes_project 17 22303707 22304510 + Srrm2 protein_coding retained_intron MGP_BALBcJ_T0017521.1 MGP_BALBcJ_G0015282.1 mouse_genomes_project 17 28355196 28480588 + Gm28052 processed_transcript processed_transcript MGP_BALBcJ_T0046835.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32544047 32547066 + MGP_BALBcJ_P0046835 Zfp414 protein_coding protein_coding MGP_BALBcJ_T0046836.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32544047 32547003 + MGP_BALBcJ_P0046836 Zfp414 protein_coding protein_coding MGP_BALBcJ_T0046837.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32544058 32546244 + Zfp414 protein_coding retained_intron MGP_BALBcJ_T0046838.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32544078 32546751 + MGP_BALBcJ_P0046838 Zfp414 protein_coding protein_coding MGP_BALBcJ_T0046839.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32544386 32544962 + MGP_BALBcJ_P0046839 Zfp414 protein_coding protein_coding MGP_BALBcJ_T0046840.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32545173 32546058 + Zfp414 protein_coding retained_intron MGP_BALBcJ_T0046841.1 MGP_BALBcJ_G0023494.1 mouse_genomes_project 17 32546375 32546977 + Zfp414 protein_coding retained_intron MGP_BALBcJ_T0045732.1 MGP_BALBcJ_G0023219.1 mouse_genomes_project 17 21762350 21787373 + MGP_BALBcJ_P0045732 protein_coding protein_coding MGP_BALBcJ_T0045737.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22076457 22086732 + MGP_BALBcJ_P0045737 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045738.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22076457 22086725 + MGP_BALBcJ_P0045738 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045739.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22076457 22086725 + MGP_BALBcJ_P0045739 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045740.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22076463 22086535 + MGP_BALBcJ_P0045740 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045741.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22076463 22086535 + MGP_BALBcJ_P0045741 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045742.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22076542 22085414 + MGP_BALBcJ_P0045742 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045743.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22081077 22082767 + Zscan10 protein_coding retained_intron MGP_BALBcJ_T0045744.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22081101 22085410 + MGP_BALBcJ_P0045744 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045745.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22081110 22085410 + MGP_BALBcJ_P0045745 Zscan10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045746.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22081110 22085411 + MGP_BALBcJ_P0045746 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045747.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22081111 22085411 + MGP_BALBcJ_P0045747 Zscan10 protein_coding protein_coding MGP_BALBcJ_T0045748.1 MGP_BALBcJ_G0023223.1 mouse_genomes_project 17 22083086 22085410 + Zscan10 protein_coding retained_intron MGP_BALBcJ_T0047212.1 MGP_BALBcJ_G0023569.1 mouse_genomes_project 17 34076252 34082630 + MGP_BALBcJ_P0047212 Hspa1l protein_coding protein_coding MGP_BALBcJ_T0048222.1 MGP_BALBcJ_G0023886.1 mouse_genomes_project 17 56435782 56437018 - MGP_BALBcJ_P0048222 Znrf4 protein_coding protein_coding MGP_BALBcJ_T0045987.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23454813 23500510 - MGP_BALBcJ_P0045987 Mapk8ip3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046002.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460176 23500549 - MGP_BALBcJ_P0046002 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046003.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460176 23500549 - MGP_BALBcJ_P0046003 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046004.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460203 23500540 - MGP_BALBcJ_P0046004 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046005.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460203 23500466 - MGP_BALBcJ_P0046005 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046006.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460203 23500539 - MGP_BALBcJ_P0046006 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046007.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460203 23500484 - MGP_BALBcJ_P0046007 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046008.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23460204 23500501 - MGP_BALBcJ_P0046008 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046009.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23461278 23462388 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046010.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23461469 23500532 - MGP_BALBcJ_P0046010 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046011.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23461618 23500540 - MGP_BALBcJ_P0046011 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046012.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23462334 23463757 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046013.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23463214 23464389 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046014.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23464488 23465753 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046015.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23465361 23466036 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046016.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23468225 23469484 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046017.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23468876 23470495 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046018.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23470531 23480356 - Mapk8ip3 protein_coding processed_transcript MGP_BALBcJ_T0046019.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23470621 23487637 - MGP_BALBcJ_P0046019 Mapk8ip3 protein_coding protein_coding MGP_BALBcJ_T0046020.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23479142 23487980 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0046021.1 MGP_BALBcJ_G0023295.1 mouse_genomes_project 17 23490877 23500517 - Mapk8ip3 protein_coding retained_intron MGP_BALBcJ_T0048117.1 MGP_BALBcJ_G0023844.1 mouse_genomes_project 17 50432883 50613759 + MGP_BALBcJ_P0048117 Plcl2 protein_coding unknown_likely_coding MGP_BALBcJ_T0046176.1 MGP_BALBcJ_G0023338.1 mouse_genomes_project 17 24435440 24442740 - MGP_BALBcJ_P0046176 Gm20683 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013205.1 MGP_BALBcJ_G0011302.1 mouse_genomes_project 17 32982780 32982900 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048118.1 MGP_BALBcJ_G0023845.1 mouse_genomes_project 17 50660157 50953673 - MGP_BALBcJ_P0048118 Tbc1d5 protein_coding unknown_likely_coding MGP_BALBcJ_T0048119.1 MGP_BALBcJ_G0023845.1 mouse_genomes_project 17 50660163 51111522 - MGP_BALBcJ_P0048119 Tbc1d5 protein_coding protein_coding MGP_BALBcJ_T0047856.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46056032 46060167 - MGP_BALBcJ_P0047856 Polr1c protein_coding protein_coding MGP_BALBcJ_T0047857.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46056213 46058686 - MGP_BALBcJ_P0047857 Polr1c protein_coding protein_coding MGP_BALBcJ_T0047858.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46056636 46060045 - Polr1c protein_coding retained_intron MGP_BALBcJ_T0047859.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46056725 46060081 - MGP_BALBcJ_P0047859 Polr1c protein_coding protein_coding MGP_BALBcJ_T0047860.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46056947 46060081 - MGP_BALBcJ_P0047860 Polr1c protein_coding protein_coding MGP_BALBcJ_T0047861.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46057045 46060081 - MGP_BALBcJ_P0047861 Polr1c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047862.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46057374 46060080 - Polr1c protein_coding retained_intron MGP_BALBcJ_T0047863.1 MGP_BALBcJ_G0023769.1 mouse_genomes_project 17 46059411 46060081 - Polr1c protein_coding retained_intron MGP_BALBcJ_T0003728.1 MGP_BALBcJ_G0003357.1 mouse_genomes_project 17 32863678 32864706 - BC051226 antisense antisense MGP_BALBcJ_T0003729.1 MGP_BALBcJ_G0003357.1 mouse_genomes_project 17 32863681 32864675 - BC051226 antisense antisense MGP_BALBcJ_T0003730.1 MGP_BALBcJ_G0003357.1 mouse_genomes_project 17 32863790 32864814 - BC051226 antisense antisense MGP_BALBcJ_T0047624.1 MGP_BALBcJ_G0023664.1 mouse_genomes_project 17 36589868 36590770 - MGP_BALBcJ_P0047624 protein_coding protein_coding MGP_BALBcJ_T0046100.1 MGP_BALBcJ_G0023318.1 mouse_genomes_project 17 23947632 23952791 + MGP_BALBcJ_P0046100 Tpsg1 protein_coding protein_coding MGP_BALBcJ_T0046101.1 MGP_BALBcJ_G0023318.1 mouse_genomes_project 17 23947648 23952500 + MGP_BALBcJ_P0046101 Tpsg1 protein_coding protein_coding MGP_BALBcJ_T0046102.1 MGP_BALBcJ_G0023318.1 mouse_genomes_project 17 23948890 23952791 + MGP_BALBcJ_P0046102 Tpsg1 protein_coding protein_coding MGP_BALBcJ_T0046103.1 MGP_BALBcJ_G0023318.1 mouse_genomes_project 17 23948921 23952793 + MGP_BALBcJ_P0046103 Tpsg1 protein_coding protein_coding MGP_BALBcJ_T0046104.1 MGP_BALBcJ_G0023318.1 mouse_genomes_project 17 23951359 23952736 + MGP_BALBcJ_P0046104 Tpsg1 protein_coding protein_coding MGP_BALBcJ_T0102293.1 MGP_BALBcJ_G0040109.1 mouse_genomes_project 17 19027858 19028797 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045691.1 MGP_BALBcJ_G0023200.1 mouse_genomes_project 17 19869811 19870066 + MGP_BALBcJ_P0045691 Gm10226 protein_coding protein_coding MGP_BALBcJ_T0048327.1 MGP_BALBcJ_G0023930.1 mouse_genomes_project 17 63898257 63898749 - MGP_BALBcJ_P0048327 A930002H24Rik protein_coding protein_coding MGP_BALBcJ_T0013233.1 MGP_BALBcJ_G0011330.1 mouse_genomes_project 17 37434009 37437479 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047190.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 33998880 34016053 + MGP_BALBcJ_P0047190 Ehmt2 protein_coding protein_coding MGP_BALBcJ_T0047191.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 33998910 34016049 + MGP_BALBcJ_P0047191 Ehmt2 protein_coding protein_coding MGP_BALBcJ_T0047192.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34000129 34016046 + MGP_BALBcJ_P0047192 Ehmt2 protein_coding protein_coding MGP_BALBcJ_T0047193.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34000146 34016053 + MGP_BALBcJ_P0047193 Ehmt2 protein_coding protein_coding MGP_BALBcJ_T0047194.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34000869 34004208 + Ehmt2 protein_coding processed_transcript MGP_BALBcJ_T0047195.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34006787 34007836 + Ehmt2 protein_coding retained_intron MGP_BALBcJ_T0047196.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34006824 34007625 + Ehmt2 protein_coding retained_intron MGP_BALBcJ_T0047197.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34007494 34008210 + Ehmt2 protein_coding retained_intron MGP_BALBcJ_T0047198.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34007586 34010143 + MGP_BALBcJ_P0047198 Ehmt2 protein_coding protein_coding MGP_BALBcJ_T0047199.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34008328 34010028 + Ehmt2 protein_coding processed_transcript MGP_BALBcJ_T0047200.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34008982 34016049 + MGP_BALBcJ_P0047200 Ehmt2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047201.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34008984 34010387 + MGP_BALBcJ_P0047201 Ehmt2 protein_coding protein_coding MGP_BALBcJ_T0047202.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34010229 34013087 + Ehmt2 protein_coding retained_intron MGP_BALBcJ_T0047203.1 MGP_BALBcJ_G0023564.1 mouse_genomes_project 17 34012559 34016054 + Ehmt2 protein_coding retained_intron MGP_BALBcJ_T0013213.1 MGP_BALBcJ_G0011310.1 mouse_genomes_project 17 35168074 35168401 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013228.1 MGP_BALBcJ_G0011325.1 mouse_genomes_project 17 36569663 36570330 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102306.1 MGP_BALBcJ_G0040122.1 mouse_genomes_project 17 24904222 24904921 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048504.1 MGP_BALBcJ_G0023982.1 mouse_genomes_project 17 74183086 74215168 - MGP_BALBcJ_P0048504 Srd5a2 protein_coding protein_coding MGP_BALBcJ_T0045454.1 MGP_BALBcJ_G0023105.1 mouse_genomes_project 17 5860735 5861834 - Gm17087 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0045455.1 MGP_BALBcJ_G0023105.1 mouse_genomes_project 17 5861282 5861753 - MGP_BALBcJ_P0045455 Gm17087 protein_coding protein_coding MGP_BALBcJ_T0046119.1 MGP_BALBcJ_G0023322.1 mouse_genomes_project 17 24161124 24165910 - MGP_BALBcJ_P0046119 Sox8 protein_coding protein_coding MGP_BALBcJ_T0046120.1 MGP_BALBcJ_G0023322.1 mouse_genomes_project 17 24163218 24165438 - MGP_BALBcJ_P0046120 Sox8 protein_coding protein_coding MGP_BALBcJ_T0046121.1 MGP_BALBcJ_G0023322.1 mouse_genomes_project 17 24163933 24165910 - MGP_BALBcJ_P0046121 Sox8 protein_coding protein_coding MGP_BALBcJ_T0045372.1 MGP_BALBcJ_G0023079.1 mouse_genomes_project 17 2533468 2797105 + MGP_BALBcJ_P0045372 Zdhhc14 protein_coding protein_coding MGP_BALBcJ_T0102337.1 MGP_BALBcJ_G0040153.1 mouse_genomes_project 17 35880136 35881915 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047043.1 MGP_BALBcJ_G0023536.1 mouse_genomes_project 17 33327606 33342335 + MGP_BALBcJ_P0047043 H2-Eb2 protein_coding protein_coding MGP_BALBcJ_T0048151.1 MGP_BALBcJ_G0023855.1 mouse_genomes_project 17 54173366 54200332 - MGP_BALBcJ_P0048151 Slc5a7 protein_coding protein_coding MGP_BALBcJ_T0047545.1 MGP_BALBcJ_G0023640.1 mouse_genomes_project 17 35744750 35748548 - MGP_BALBcJ_P0047545 H2-M10.3 protein_coding protein_coding MGP_BALBcJ_T0017525.1 MGP_BALBcJ_G0015286.1 mouse_genomes_project 17 32990962 32996501 - Gm20427 processed_transcript retained_intron MGP_BALBcJ_T0045598.1 MGP_BALBcJ_G0023143.1 mouse_genomes_project 17 13084840 13106028 - MGP_BALBcJ_P0045598 Prdm9 protein_coding protein_coding MGP_BALBcJ_T0045599.1 MGP_BALBcJ_G0023143.1 mouse_genomes_project 17 13086209 13097883 - Prdm9 protein_coding retained_intron MGP_BALBcJ_T0045600.1 MGP_BALBcJ_G0023143.1 mouse_genomes_project 17 13086322 13097415 - Prdm9 protein_coding retained_intron MGP_BALBcJ_T0045601.1 MGP_BALBcJ_G0023143.1 mouse_genomes_project 17 13095235 13107045 - MGP_BALBcJ_P0045601 Prdm9 protein_coding protein_coding MGP_BALBcJ_T0045602.1 MGP_BALBcJ_G0023143.1 mouse_genomes_project 17 13100935 13107059 - Prdm9 protein_coding retained_intron MGP_BALBcJ_T0045603.1 MGP_BALBcJ_G0023143.1 mouse_genomes_project 17 13105520 13107027 - Prdm9 protein_coding processed_transcript MGP_BALBcJ_T0048584.1 MGP_BALBcJ_G0024011.1 mouse_genomes_project 17 79841342 79843347 + MGP_BALBcJ_P0048584 4921513D11Rik protein_coding protein_coding MGP_BALBcJ_T0003771.1 MGP_BALBcJ_G0003390.1 mouse_genomes_project 17 71870126 71871095 - Gm15641 antisense antisense MGP_BALBcJ_T0046693.1 MGP_BALBcJ_G0023454.1 mouse_genomes_project 17 30424647 30448220 + MGP_BALBcJ_P0046693 Pknox1 protein_coding protein_coding MGP_BALBcJ_T0046694.1 MGP_BALBcJ_G0023454.1 mouse_genomes_project 17 30426395 30450423 + MGP_BALBcJ_P0046694 Pknox1 protein_coding protein_coding MGP_BALBcJ_T0046695.1 MGP_BALBcJ_G0023454.1 mouse_genomes_project 17 30426539 30450419 + MGP_BALBcJ_P0046695 Pknox1 protein_coding protein_coding MGP_BALBcJ_T0046696.1 MGP_BALBcJ_G0023454.1 mouse_genomes_project 17 30434571 30434998 + Pknox1 protein_coding processed_transcript MGP_BALBcJ_T0046697.1 MGP_BALBcJ_G0023454.1 mouse_genomes_project 17 30437584 30442365 + Pknox1 protein_coding retained_intron MGP_BALBcJ_T0046698.1 MGP_BALBcJ_G0023454.1 mouse_genomes_project 17 30445476 30446323 + Pknox1 protein_coding retained_intron MGP_BALBcJ_T0048470.1 MGP_BALBcJ_G0023967.1 mouse_genomes_project 17 71569156 71570748 - Gm4707 protein_coding translated_processed_pseudogene MGP_BALBcJ_T0048471.1 MGP_BALBcJ_G0023967.1 mouse_genomes_project 17 71569854 71570130 - MGP_BALBcJ_P0048471 Gm4707 protein_coding protein_coding MGP_BALBcJ_T0048472.1 MGP_BALBcJ_G0023967.1 mouse_genomes_project 17 71570659 71571225 - MGP_BALBcJ_P0048472 Gm4707 protein_coding protein_coding MGP_BALBcJ_T0013226.1 MGP_BALBcJ_G0011323.1 mouse_genomes_project 17 36014445 36015013 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013215.1 MGP_BALBcJ_G0011312.1 mouse_genomes_project 17 35453346 35453890 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046737.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31221236 31249126 - MGP_BALBcJ_P0046737 Wiz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046738.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31221237 31249194 - MGP_BALBcJ_P0046738 Wiz protein_coding unknown_likely_coding MGP_BALBcJ_T0046739.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31221238 31249367 - MGP_BALBcJ_P0046739 Wiz protein_coding protein_coding MGP_BALBcJ_T0046740.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31221242 31250212 - MGP_BALBcJ_P0046740 Wiz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046741.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31221830 31230145 - MGP_BALBcJ_P0046741 Wiz protein_coding protein_coding MGP_BALBcJ_T0046742.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31222205 31248241 - MGP_BALBcJ_P0046742 Wiz protein_coding protein_coding MGP_BALBcJ_T0046743.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31228856 31231645 - Wiz protein_coding processed_transcript MGP_BALBcJ_T0046744.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31228995 31236667 - Wiz protein_coding retained_intron MGP_BALBcJ_T0046745.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31229090 31249068 - MGP_BALBcJ_P0046745 Wiz protein_coding protein_coding MGP_BALBcJ_T0046746.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31234279 31249208 - Wiz protein_coding retained_intron MGP_BALBcJ_T0046747.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31235319 31249432 - MGP_BALBcJ_P0046747 Wiz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046748.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31236553 31250197 - MGP_BALBcJ_P0046748 Wiz protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046749.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31236667 31250222 - Wiz protein_coding retained_intron MGP_BALBcJ_T0046750.1 MGP_BALBcJ_G0023465.1 mouse_genomes_project 17 31248054 31249598 - MGP_BALBcJ_P0046750 Wiz protein_coding protein_coding MGP_BALBcJ_T0047870.1 MGP_BALBcJ_G0023771.1 mouse_genomes_project 17 46066277 46069389 + MGP_BALBcJ_P0047870 Lrrc73 protein_coding protein_coding MGP_BALBcJ_T0003743.1 MGP_BALBcJ_G0003369.1 mouse_genomes_project 17 35227997 35280686 + antisense antisense MGP_BALBcJ_T0099579.1 MGP_BALBcJ_G0037615.1 mouse_genomes_project 17 60460160 60460323 + Gm23447 snRNA snRNA MGP_BALBcJ_T0006880.1 MGP_BALBcJ_G0005662.1 mouse_genomes_project 17 12915036 12920011 + A930024N18Rik lincRNA lincRNA MGP_BALBcJ_T0003746.1 MGP_BALBcJ_G0003372.1 mouse_genomes_project 17 36345308 36355314 + 1700031A10Rik antisense antisense MGP_BALBcJ_T0045862.1 MGP_BALBcJ_G0023258.1 mouse_genomes_project 17 22745768 22751674 - MGP_BALBcJ_P0045862 1600002H07Rik protein_coding protein_coding MGP_BALBcJ_T0045863.1 MGP_BALBcJ_G0023258.1 mouse_genomes_project 17 22745955 22751735 - 1600002H07Rik protein_coding retained_intron MGP_BALBcJ_T0045864.1 MGP_BALBcJ_G0023258.1 mouse_genomes_project 17 22746262 22751576 - MGP_BALBcJ_P0045864 1600002H07Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045865.1 MGP_BALBcJ_G0023258.1 mouse_genomes_project 17 22750062 22751615 - 1600002H07Rik protein_coding retained_intron MGP_BALBcJ_T0045866.1 MGP_BALBcJ_G0023258.1 mouse_genomes_project 17 22750664 22751637 - 1600002H07Rik protein_coding retained_intron MGP_BALBcJ_T0017498.1 MGP_BALBcJ_G0015272.1 mouse_genomes_project 17 5596185 5613630 - 4930506C21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017499.1 MGP_BALBcJ_G0015272.1 mouse_genomes_project 17 5599778 5601242 - 4930506C21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017500.1 MGP_BALBcJ_G0015272.1 mouse_genomes_project 17 5600493 5613658 - 4930506C21Rik processed_transcript retained_intron MGP_BALBcJ_T0045798.1 MGP_BALBcJ_G0023241.1 mouse_genomes_project 17 22324129 22335037 + Prss32 protein_coding processed_transcript MGP_BALBcJ_T0045799.1 MGP_BALBcJ_G0023241.1 mouse_genomes_project 17 22334116 22340286 + MGP_BALBcJ_P0045799 Prss32 protein_coding protein_coding MGP_BALBcJ_T0045800.1 MGP_BALBcJ_G0023241.1 mouse_genomes_project 17 22334359 22339846 + MGP_BALBcJ_P0045800 Prss32 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045759.1 MGP_BALBcJ_G0023227.1 mouse_genomes_project 17 22153657 22155289 + MGP_BALBcJ_P0045759 Hcfc1r1 protein_coding protein_coding MGP_BALBcJ_T0045760.1 MGP_BALBcJ_G0023227.1 mouse_genomes_project 17 22153669 22155289 + MGP_BALBcJ_P0045760 Hcfc1r1 protein_coding protein_coding MGP_BALBcJ_T0045761.1 MGP_BALBcJ_G0023227.1 mouse_genomes_project 17 22153688 22155236 + MGP_BALBcJ_P0045761 Hcfc1r1 protein_coding protein_coding MGP_BALBcJ_T0011407.1 MGP_BALBcJ_G0009532.1 mouse_genomes_project 17 46221401 46221725 + Gm23037 misc_RNA misc_RNA MGP_BALBcJ_T0047641.1 MGP_BALBcJ_G0023679.1 mouse_genomes_project 17 36951920 36959925 + MGP_BALBcJ_P0047641 protein_coding protein_coding MGP_BALBcJ_T0046893.1 MGP_BALBcJ_G0023504.1 mouse_genomes_project 17 32800999 32805293 - protein_coding retained_intron MGP_BALBcJ_T0048203.1 MGP_BALBcJ_G0023882.1 mouse_genomes_project 17 56215171 56221345 - MGP_BALBcJ_P0048203 Arrdc5 protein_coding protein_coding MGP_BALBcJ_T0045580.1 MGP_BALBcJ_G0023139.1 mouse_genomes_project 17 12936740 12974088 + MGP_BALBcJ_P0045580 Fam120b protein_coding protein_coding MGP_BALBcJ_T0099588.1 MGP_BALBcJ_G0037624.1 mouse_genomes_project 17 84862926 84863035 + Gm26066 snRNA snRNA MGP_BALBcJ_T0047450.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35122404 35125423 - MGP_BALBcJ_P0047450 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047451.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35122408 35127139 - MGP_BALBcJ_P0047451 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047452.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35122408 35126828 - MGP_BALBcJ_P0047452 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047453.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35122418 35126819 - MGP_BALBcJ_P0047453 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047454.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35122562 35125628 - MGP_BALBcJ_P0047454 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047455.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35124751 35126781 - MGP_BALBcJ_P0047455 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047456.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35125478 35126316 - 2310061I04Rik protein_coding processed_transcript MGP_BALBcJ_T0047457.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35125627 35126811 - MGP_BALBcJ_P0047457 2310061I04Rik protein_coding protein_coding MGP_BALBcJ_T0047458.1 MGP_BALBcJ_G0023619.1 mouse_genomes_project 17 35125980 35127020 - 2310061I04Rik protein_coding processed_transcript MGP_BALBcJ_T0048718.1 MGP_BALBcJ_G0024066.1 mouse_genomes_project 17 88077503 88126897 - MGP_BALBcJ_P0048718 Kcnk12 protein_coding protein_coding MGP_BALBcJ_T0017509.1 MGP_BALBcJ_G0015277.1 mouse_genomes_project 17 18824593 18825619 + Vmn1r227 processed_transcript pseudogene MGP_BALBcJ_T0045976.1 MGP_BALBcJ_G0023291.1 mouse_genomes_project 17 23441470 23444709 + MGP_BALBcJ_P0045976 Igfals protein_coding protein_coding MGP_BALBcJ_T0047656.1 MGP_BALBcJ_G0023692.1 mouse_genomes_project 17 37297881 37298822 + MGP_BALBcJ_P0047656 Olfr123 protein_coding protein_coding MGP_BALBcJ_T0045677.1 MGP_BALBcJ_G0023189.1 mouse_genomes_project 17 19431525 19433989 + MGP_BALBcJ_P0045677 Vmn1r235 protein_coding protein_coding MGP_BALBcJ_T0006876.1 MGP_BALBcJ_G0005658.1 mouse_genomes_project 17 9583398 9591765 + 4732491K20Rik lincRNA lincRNA MGP_BALBcJ_T0045645.1 MGP_BALBcJ_G0023163.1 mouse_genomes_project 17 17391886 17419613 + MGP_BALBcJ_P0045645 protein_coding protein_coding MGP_BALBcJ_T0098339.1 MGP_BALBcJ_G0036393.1 mouse_genomes_project 17 32354700 32356070 + pseudogene pseudogene MGP_BALBcJ_T0046208.1 MGP_BALBcJ_G0023342.1 mouse_genomes_project 17 24464642 24470062 - MGP_BALBcJ_P0046208 Fam195a protein_coding protein_coding MGP_BALBcJ_T0047337.1 MGP_BALBcJ_G0023597.1 mouse_genomes_project 17 34336407 34339672 + MGP_BALBcJ_P0047337 Gm16181 protein_coding protein_coding MGP_BALBcJ_T0102290.1 MGP_BALBcJ_G0040106.1 mouse_genomes_project 17 18489273 18490024 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045680.1 MGP_BALBcJ_G0023192.1 mouse_genomes_project 17 19553795 19571596 + MGP_BALBcJ_P0045680 Zfp677 protein_coding protein_coding MGP_BALBcJ_T0045681.1 MGP_BALBcJ_G0023192.1 mouse_genomes_project 17 19553795 19571593 + MGP_BALBcJ_P0045681 Zfp677 protein_coding protein_coding MGP_BALBcJ_T0102302.1 MGP_BALBcJ_G0040118.1 mouse_genomes_project 17 21489737 21490912 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102315.1 MGP_BALBcJ_G0040131.1 mouse_genomes_project 17 33391663 33398704 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047042.1 MGP_BALBcJ_G0023535.1 mouse_genomes_project 17 33307949 33318231 + MGP_BALBcJ_P0047042 H2-Eb1 protein_coding protein_coding MGP_BALBcJ_T0046710.1 MGP_BALBcJ_G0023458.1 mouse_genomes_project 17 30782089 30890764 - MGP_BALBcJ_P0046710 Hsf2bp protein_coding protein_coding MGP_BALBcJ_T0046711.1 MGP_BALBcJ_G0023458.1 mouse_genomes_project 17 30783648 30867939 - MGP_BALBcJ_P0046711 Hsf2bp protein_coding protein_coding MGP_BALBcJ_T0046712.1 MGP_BALBcJ_G0023458.1 mouse_genomes_project 17 30865817 30879461 - Hsf2bp protein_coding processed_transcript MGP_BALBcJ_T0047010.1 MGP_BALBcJ_G0023527.1 mouse_genomes_project 17 33181340 33182857 - Psmb9 protein_coding retained_intron MGP_BALBcJ_T0047011.1 MGP_BALBcJ_G0023527.1 mouse_genomes_project 17 33181343 33186667 - Psmb9 protein_coding retained_intron MGP_BALBcJ_T0047012.1 MGP_BALBcJ_G0023527.1 mouse_genomes_project 17 33181476 33186623 - MGP_BALBcJ_P0047012 Psmb9 protein_coding protein_coding MGP_BALBcJ_T0047013.1 MGP_BALBcJ_G0023527.1 mouse_genomes_project 17 33183337 33186652 - Psmb9 protein_coding retained_intron MGP_BALBcJ_T0047014.1 MGP_BALBcJ_G0023527.1 mouse_genomes_project 17 33183589 33186533 - MGP_BALBcJ_P0047014 Psmb9 protein_coding protein_coding MGP_BALBcJ_T0046774.1 MGP_BALBcJ_G0023473.1 mouse_genomes_project 17 31584567 31602175 + MGP_BALBcJ_P0046774 Cyp4f15 protein_coding protein_coding MGP_BALBcJ_T0046775.1 MGP_BALBcJ_G0023473.1 mouse_genomes_project 17 31584608 31589194 + Cyp4f15 protein_coding retained_intron MGP_BALBcJ_T0046776.1 MGP_BALBcJ_G0023473.1 mouse_genomes_project 17 31584611 31596721 + Cyp4f15 protein_coding processed_transcript MGP_BALBcJ_T0046777.1 MGP_BALBcJ_G0023473.1 mouse_genomes_project 17 31584619 31602175 + MGP_BALBcJ_P0046777 Cyp4f15 protein_coding protein_coding MGP_BALBcJ_T0046167.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24429842 24432816 + MGP_BALBcJ_P0046167 Jmjd8 protein_coding protein_coding MGP_BALBcJ_T0046168.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430018 24432818 + MGP_BALBcJ_P0046168 Jmjd8 protein_coding protein_coding MGP_BALBcJ_T0046169.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430039 24431126 + Jmjd8 protein_coding retained_intron MGP_BALBcJ_T0046170.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430046 24431601 + MGP_BALBcJ_P0046170 Jmjd8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046171.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430095 24431609 + MGP_BALBcJ_P0046171 Jmjd8 protein_coding protein_coding MGP_BALBcJ_T0046172.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430096 24431337 + Jmjd8 protein_coding retained_intron MGP_BALBcJ_T0046173.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430272 24431502 + Jmjd8 protein_coding retained_intron MGP_BALBcJ_T0046174.1 MGP_BALBcJ_G0023336.1 mouse_genomes_project 17 24430814 24431697 + Jmjd8 protein_coding retained_intron MGP_BALBcJ_T0045413.1 MGP_BALBcJ_G0023093.1 mouse_genomes_project 17 4476587 4618022 + MGP_BALBcJ_P0045413 Rps6ka2 protein_coding protein_coding MGP_BALBcJ_T0047542.1 MGP_BALBcJ_G0023638.1 mouse_genomes_project 17 35628866 35631130 - MGP_BALBcJ_P0047542 H2-M10.2 protein_coding protein_coding MGP_BALBcJ_T0046496.1 MGP_BALBcJ_G0023406.1 mouse_genomes_project 17 27311067 27322002 + MGP_BALBcJ_P0046496 Clpsl2 protein_coding protein_coding MGP_BALBcJ_T0048630.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83938425 84026605 + MGP_BALBcJ_P0048630 Mta3 protein_coding protein_coding MGP_BALBcJ_T0048631.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83938425 84039153 + MGP_BALBcJ_P0048631 Mta3 protein_coding protein_coding MGP_BALBcJ_T0048632.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83938425 84026603 + MGP_BALBcJ_P0048632 Mta3 protein_coding protein_coding MGP_BALBcJ_T0048633.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83938446 84055230 + MGP_BALBcJ_P0048633 Mta3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048634.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83938453 84048619 + MGP_BALBcJ_P0048634 Mta3 protein_coding protein_coding MGP_BALBcJ_T0048635.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83938520 84057391 + MGP_BALBcJ_P0048635 Mta3 protein_coding unknown_likely_coding MGP_BALBcJ_T0048636.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83962468 83987078 + Mta3 protein_coding processed_transcript MGP_BALBcJ_T0048637.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 83988843 84033970 + MGP_BALBcJ_P0048637 Mta3 protein_coding protein_coding MGP_BALBcJ_T0048638.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 84018063 84053930 + MGP_BALBcJ_P0048638 Mta3 protein_coding protein_coding MGP_BALBcJ_T0048639.1 MGP_BALBcJ_G0024035.1 mouse_genomes_project 17 84029151 84038327 + Mta3 protein_coding processed_transcript MGP_BALBcJ_T0045773.1 MGP_BALBcJ_G0023234.1 mouse_genomes_project 17 22220212 22224853 - MGP_BALBcJ_P0045773 Kremen2 protein_coding protein_coding MGP_BALBcJ_T0098546.1 MGP_BALBcJ_G0036600.1 mouse_genomes_project 17 95139421 95139528 + Gm23964 rRNA rRNA MGP_BALBcJ_T0102286.1 MGP_BALBcJ_G0040102.1 mouse_genomes_project 17 17975714 17976613 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099584.1 MGP_BALBcJ_G0037620.1 mouse_genomes_project 17 80261249 80261345 + Gm22215 snRNA snRNA MGP_BALBcJ_T0045870.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887421 22932762 + Abca3 protein_coding retained_intron MGP_BALBcJ_T0045871.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887494 22945032 + MGP_BALBcJ_P0045871 Abca3 protein_coding protein_coding MGP_BALBcJ_T0045872.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887517 22945032 + MGP_BALBcJ_P0045872 Abca3 protein_coding protein_coding MGP_BALBcJ_T0045873.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887562 22935942 + Abca3 protein_coding retained_intron MGP_BALBcJ_T0045874.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887562 22912357 + Abca3 protein_coding retained_intron MGP_BALBcJ_T0045875.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887574 22896394 + Abca3 protein_coding processed_transcript MGP_BALBcJ_T0045876.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22887579 22918245 + Abca3 protein_coding retained_intron MGP_BALBcJ_T0045877.1 MGP_BALBcJ_G0023261.1 mouse_genomes_project 17 22899782 22945032 + MGP_BALBcJ_P0045877 Abca3 protein_coding protein_coding MGP_BALBcJ_T0046409.1 MGP_BALBcJ_G0023390.1 mouse_genomes_project 17 26487667 26557446 - MGP_BALBcJ_P0046409 D17Wsu92e protein_coding protein_coding MGP_BALBcJ_T0046410.1 MGP_BALBcJ_G0023390.1 mouse_genomes_project 17 26487681 26557446 - MGP_BALBcJ_P0046410 D17Wsu92e protein_coding protein_coding MGP_BALBcJ_T0046411.1 MGP_BALBcJ_G0023390.1 mouse_genomes_project 17 26503929 26557446 - MGP_BALBcJ_P0046411 D17Wsu92e protein_coding protein_coding MGP_BALBcJ_T0099592.1 MGP_BALBcJ_G0037628.1 mouse_genomes_project 17 94691772 94691881 - Gm22593 snRNA snRNA MGP_BALBcJ_T0003737.1 MGP_BALBcJ_G0003363.1 mouse_genomes_project 17 34235052 34238709 - Gm20522 antisense antisense MGP_BALBcJ_T0003760.1 MGP_BALBcJ_G0003381.1 mouse_genomes_project 17 49733879 49738072 - Gm16555 antisense antisense MGP_BALBcJ_T0045772.1 MGP_BALBcJ_G0023233.1 mouse_genomes_project 17 22215183 22219343 - MGP_BALBcJ_P0045772 Paqr4 protein_coding protein_coding MGP_BALBcJ_T0045367.1 MGP_BALBcJ_G0023076.1 mouse_genomes_project 17 2152853 2153607 - protein_coding processed_transcript MGP_BALBcJ_T0047631.1 MGP_BALBcJ_G0023671.1 mouse_genomes_project 17 36723876 36724883 - MGP_BALBcJ_P0047631 Olfr99 protein_coding protein_coding MGP_BALBcJ_T0047358.1 MGP_BALBcJ_G0023601.1 mouse_genomes_project 17 34710447 34714513 - MGP_BALBcJ_P0047358 Tcf19 protein_coding protein_coding MGP_BALBcJ_T0047359.1 MGP_BALBcJ_G0023601.1 mouse_genomes_project 17 34710450 34714474 - MGP_BALBcJ_P0047359 Tcf19 protein_coding protein_coding MGP_BALBcJ_T0047360.1 MGP_BALBcJ_G0023601.1 mouse_genomes_project 17 34712343 34714509 - MGP_BALBcJ_P0047360 Tcf19 protein_coding protein_coding MGP_BALBcJ_T0047361.1 MGP_BALBcJ_G0023601.1 mouse_genomes_project 17 34712507 34714236 - MGP_BALBcJ_P0047361 Tcf19 protein_coding protein_coding MGP_BALBcJ_T0047661.1 MGP_BALBcJ_G0023697.1 mouse_genomes_project 17 37458379 37464982 - MGP_BALBcJ_P0047661 protein_coding protein_coding MGP_BALBcJ_T0046903.1 MGP_BALBcJ_G0023506.1 mouse_genomes_project 17 32871374 32876108 + MGP_BALBcJ_P0046903 Tapbp protein_coding protein_coding MGP_BALBcJ_T0046906.1 MGP_BALBcJ_G0023506.1 mouse_genomes_project 17 32875024 32884905 + MGP_BALBcJ_P0046906 Tapbp protein_coding protein_coding MGP_BALBcJ_T0046907.1 MGP_BALBcJ_G0023506.1 mouse_genomes_project 17 32875204 32876068 + Tapbp protein_coding retained_intron MGP_BALBcJ_T0046908.1 MGP_BALBcJ_G0023506.1 mouse_genomes_project 17 32876220 32881805 + Tapbp protein_coding processed_transcript MGP_BALBcJ_T0046909.1 MGP_BALBcJ_G0023506.1 mouse_genomes_project 17 32881725 32883894 + Tapbp protein_coding retained_intron MGP_BALBcJ_T0013210.1 MGP_BALBcJ_G0011307.1 mouse_genomes_project 17 34059761 34060138 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046864.1 MGP_BALBcJ_G0023499.1 mouse_genomes_project 17 32698218 32706060 - MGP_BALBcJ_P0046864 Angptl4 protein_coding protein_coding MGP_BALBcJ_T0046865.1 MGP_BALBcJ_G0023499.1 mouse_genomes_project 17 32699381 32706028 - MGP_BALBcJ_P0046865 Angptl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046866.1 MGP_BALBcJ_G0023499.1 mouse_genomes_project 17 32701456 32702951 - Angptl4 protein_coding retained_intron MGP_BALBcJ_T0046867.1 MGP_BALBcJ_G0023499.1 mouse_genomes_project 17 32701497 32703629 - Angptl4 protein_coding processed_transcript MGP_BALBcJ_T0045731.1 MGP_BALBcJ_G0023218.1 mouse_genomes_project 17 21762350 21865638 + MGP_BALBcJ_P0045731 protein_coding protein_coding MGP_BALBcJ_T0046773.1 MGP_BALBcJ_G0023472.1 mouse_genomes_project 17 31558570 31575348 + MGP_BALBcJ_P0046773 Cyp4f40 protein_coding protein_coding MGP_BALBcJ_T0048158.1 MGP_BALBcJ_G0023859.1 mouse_genomes_project 17 55559847 55613491 - MGP_BALBcJ_P0048158 Pot1b protein_coding protein_coding MGP_BALBcJ_T0046765.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31403036 31428382 + MGP_BALBcJ_P0046765 protein_coding protein_coding MGP_BALBcJ_T0046766.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31403047 31428381 + MGP_BALBcJ_P0046766 protein_coding protein_coding MGP_BALBcJ_T0046767.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31403055 31428382 + MGP_BALBcJ_P0046767 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046768.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31403073 31420992 + protein_coding processed_transcript MGP_BALBcJ_T0046769.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31403079 31417392 + protein_coding retained_intron MGP_BALBcJ_T0046770.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31418618 31420992 + protein_coding retained_intron MGP_BALBcJ_T0046771.1 MGP_BALBcJ_G0023470.1 mouse_genomes_project 17 31422353 31427860 + protein_coding retained_intron MGP_BALBcJ_T0011400.1 MGP_BALBcJ_G0009525.1 mouse_genomes_project 17 27859985 27860157 + Gm27599 misc_RNA misc_RNA MGP_BALBcJ_T0003709.1 MGP_BALBcJ_G0003342.1 mouse_genomes_project 17 23277562 23277996 - Snhg9 antisense antisense MGP_BALBcJ_T0047022.1 MGP_BALBcJ_G0023529.1 mouse_genomes_project 17 33197302 33208175 + MGP_BALBcJ_P0047022 Psmb8 protein_coding protein_coding MGP_BALBcJ_T0047023.1 MGP_BALBcJ_G0023529.1 mouse_genomes_project 17 33197371 33208712 + MGP_BALBcJ_P0047023 Psmb8 protein_coding protein_coding MGP_BALBcJ_T0047024.1 MGP_BALBcJ_G0023529.1 mouse_genomes_project 17 33198190 33208682 + Psmb8 protein_coding retained_intron MGP_BALBcJ_T0102329.1 MGP_BALBcJ_G0040145.1 mouse_genomes_project 17 35425466 35428731 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003697.1 MGP_BALBcJ_G0003336.1 mouse_genomes_project 17 10010436 10131682 + antisense antisense MGP_BALBcJ_T0003698.1 MGP_BALBcJ_G0003336.1 mouse_genomes_project 17 10010455 10100563 + antisense antisense MGP_BALBcJ_T0003699.1 MGP_BALBcJ_G0003336.1 mouse_genomes_project 17 10010499 10085878 + antisense antisense MGP_BALBcJ_T0003700.1 MGP_BALBcJ_G0003336.1 mouse_genomes_project 17 10010510 10085038 + antisense antisense MGP_BALBcJ_T0003701.1 MGP_BALBcJ_G0003336.1 mouse_genomes_project 17 10010523 10100464 + antisense antisense MGP_BALBcJ_T0003702.1 MGP_BALBcJ_G0003336.1 mouse_genomes_project 17 10086251 10100648 + antisense antisense MGP_BALBcJ_T0046591.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28160721 28179571 + MGP_BALBcJ_P0046591 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046592.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28160739 28164867 + protein_coding processed_transcript MGP_BALBcJ_T0046593.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28160749 28166804 + protein_coding retained_intron MGP_BALBcJ_T0046594.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28160749 28179464 + MGP_BALBcJ_P0046594 protein_coding protein_coding MGP_BALBcJ_T0046595.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28165244 28167759 + protein_coding retained_intron MGP_BALBcJ_T0046596.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28168759 28174842 + protein_coding retained_intron MGP_BALBcJ_T0046597.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28168771 28174213 + protein_coding retained_intron MGP_BALBcJ_T0046598.1 MGP_BALBcJ_G0023427.1 mouse_genomes_project 17 28176454 28178359 + protein_coding processed_transcript MGP_BALBcJ_T0048610.1 MGP_BALBcJ_G0024025.1 mouse_genomes_project 17 80826570 80975432 - MGP_BALBcJ_P0048610 Map4k3 protein_coding protein_coding MGP_BALBcJ_T0048611.1 MGP_BALBcJ_G0024025.1 mouse_genomes_project 17 80826570 80975432 - MGP_BALBcJ_P0048611 Map4k3 protein_coding protein_coding MGP_BALBcJ_T0047683.1 MGP_BALBcJ_G0023714.1 mouse_genomes_project 17 40030953 40056682 - MGP_BALBcJ_P0047683 protein_coding protein_coding MGP_BALBcJ_T0048435.1 MGP_BALBcJ_G0023960.1 mouse_genomes_project 17 71035393 71035885 + MGP_BALBcJ_P0048435 Gm16519 protein_coding protein_coding MGP_BALBcJ_T0046772.1 MGP_BALBcJ_G0023471.1 mouse_genomes_project 17 31500675 31530054 + MGP_BALBcJ_P0046772 protein_coding protein_coding MGP_BALBcJ_T0048446.1 MGP_BALBcJ_G0023963.1 mouse_genomes_project 17 71126246 71232851 + MGP_BALBcJ_P0048446 Myom1 protein_coding protein_coding MGP_BALBcJ_T0048447.1 MGP_BALBcJ_G0023963.1 mouse_genomes_project 17 71126293 71232852 + MGP_BALBcJ_P0048447 Myom1 protein_coding protein_coding MGP_BALBcJ_T0048448.1 MGP_BALBcJ_G0023963.1 mouse_genomes_project 17 71126293 71232852 + MGP_BALBcJ_P0048448 Myom1 protein_coding protein_coding MGP_BALBcJ_T0048278.1 MGP_BALBcJ_G0023909.1 mouse_genomes_project 17 56995276 57004745 - MGP_BALBcJ_P0048278 Slc25a41 protein_coding protein_coding MGP_BALBcJ_T0048279.1 MGP_BALBcJ_G0023909.1 mouse_genomes_project 17 56995428 57004738 - MGP_BALBcJ_P0048279 Slc25a41 protein_coding protein_coding MGP_BALBcJ_T0100838.1 MGP_BALBcJ_G0038874.1 mouse_genomes_project 17 36262584 36262711 - Gm25973 snoRNA snoRNA MGP_BALBcJ_T0045637.1 MGP_BALBcJ_G0023156.1 mouse_genomes_project 17 15652317 15688948 + MGP_BALBcJ_P0045637 Vmn2r124 protein_coding protein_coding MGP_BALBcJ_T0048004.1 MGP_BALBcJ_G0023816.1 mouse_genomes_project 17 47553554 47556512 - MGP_BALBcJ_P0048004 protein_coding protein_coding MGP_BALBcJ_T0048005.1 MGP_BALBcJ_G0023816.1 mouse_genomes_project 17 47553554 47557502 - MGP_BALBcJ_P0048005 protein_coding protein_coding MGP_BALBcJ_T0048006.1 MGP_BALBcJ_G0023816.1 mouse_genomes_project 17 47553656 47555932 - protein_coding retained_intron MGP_BALBcJ_T0048008.1 MGP_BALBcJ_G0023816.1 mouse_genomes_project 17 47554615 47556439 - MGP_BALBcJ_P0048008 protein_coding protein_coding MGP_BALBcJ_T0048009.1 MGP_BALBcJ_G0023816.1 mouse_genomes_project 17 47557251 47559772 - protein_coding retained_intron MGP_BALBcJ_T0013241.1 MGP_BALBcJ_G0011338.1 mouse_genomes_project 17 45255439 45255946 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013181.1 MGP_BALBcJ_G0011278.1 mouse_genomes_project 17 6619692 6620679 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102332.1 MGP_BALBcJ_G0040148.1 mouse_genomes_project 17 35500878 35501786 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047239.1 MGP_BALBcJ_G0023573.1 mouse_genomes_project 17 34130236 34132139 - Sapcd1 protein_coding retained_intron MGP_BALBcJ_T0047240.1 MGP_BALBcJ_G0023573.1 mouse_genomes_project 17 34130236 34132394 - MGP_BALBcJ_P0047240 Sapcd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047241.1 MGP_BALBcJ_G0023573.1 mouse_genomes_project 17 34130252 34132496 - MGP_BALBcJ_P0047241 Sapcd1 protein_coding protein_coding MGP_BALBcJ_T0047242.1 MGP_BALBcJ_G0023573.1 mouse_genomes_project 17 34130540 34132496 - MGP_BALBcJ_P0047242 Sapcd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045539.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11108854 11265293 + MGP_BALBcJ_P0045539 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045540.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11108891 11265649 + MGP_BALBcJ_P0045540 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045541.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11108922 11250283 + MGP_BALBcJ_P0045541 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045542.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11108922 11263631 + MGP_BALBcJ_P0045542 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045543.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11109397 11167714 + MGP_BALBcJ_P0045543 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045544.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11109399 11167689 + MGP_BALBcJ_P0045544 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045545.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11109513 11263506 + MGP_BALBcJ_P0045545 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045546.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11110428 11204166 + Mllt4 protein_coding processed_transcript MGP_BALBcJ_T0045547.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11200902 11205538 + Mllt4 protein_coding retained_intron MGP_BALBcJ_T0045548.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11201673 11205225 + Mllt4 protein_coding processed_transcript MGP_BALBcJ_T0045549.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11224748 11233963 + Mllt4 protein_coding processed_transcript MGP_BALBcJ_T0045550.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11233443 11234328 + Mllt4 protein_coding retained_intron MGP_BALBcJ_T0045551.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11239997 11263575 + MGP_BALBcJ_P0045551 Mllt4 protein_coding protein_coding MGP_BALBcJ_T0045552.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11241301 11450655 + Mllt4 protein_coding retained_intron MGP_BALBcJ_T0045553.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11252621 11263868 + Mllt4 protein_coding retained_intron MGP_BALBcJ_T0045554.1 MGP_BALBcJ_G0023129.1 mouse_genomes_project 17 11252783 11265294 + Mllt4 protein_coding retained_intron MGP_BALBcJ_T0045790.1 MGP_BALBcJ_G0023238.1 mouse_genomes_project 17 22304912 22309197 - MGP_BALBcJ_P0045790 Tceb2 protein_coding protein_coding MGP_BALBcJ_T0047664.1 MGP_BALBcJ_G0023699.1 mouse_genomes_project 17 37570630 37571904 + MGP_BALBcJ_P0047664 Olfr130 protein_coding protein_coding MGP_BALBcJ_T0046724.1 MGP_BALBcJ_G0023460.1 mouse_genomes_project 17 30977120 31030189 - MGP_BALBcJ_P0046724 Notch3 protein_coding protein_coding MGP_BALBcJ_T0046132.1 MGP_BALBcJ_G0023324.1 mouse_genomes_project 17 24312421 24314644 + MGP_BALBcJ_P0046132 Gng13 protein_coding protein_coding MGP_BALBcJ_T0046133.1 MGP_BALBcJ_G0023324.1 mouse_genomes_project 17 24312776 24314325 + MGP_BALBcJ_P0046133 Gng13 protein_coding protein_coding MGP_BALBcJ_T0046095.1 MGP_BALBcJ_G0023314.1 mouse_genomes_project 17 23882842 23886079 + MGP_BALBcJ_P0046095 Prss28 protein_coding protein_coding MGP_BALBcJ_T0048276.1 MGP_BALBcJ_G0023907.1 mouse_genomes_project 17 56965462 56973861 - MGP_BALBcJ_P0048276 Gtf2f1 protein_coding protein_coding MGP_BALBcJ_T0003703.1 MGP_BALBcJ_G0003337.1 mouse_genomes_project 17 11108228 11108844 - Gm16052 antisense antisense MGP_BALBcJ_T0048311.1 MGP_BALBcJ_G0023924.1 mouse_genomes_project 17 57685102 57685555 - MGP_BALBcJ_P0048311 Gm21834 protein_coding protein_coding MGP_BALBcJ_T0048312.1 MGP_BALBcJ_G0023925.1 mouse_genomes_project 17 57716678 58369513 + MGP_BALBcJ_P0048312 Cntnap5c protein_coding unknown_likely_coding MGP_BALBcJ_T0048313.1 MGP_BALBcJ_G0023925.1 mouse_genomes_project 17 57716678 58369513 + MGP_BALBcJ_P0048313 Cntnap5c protein_coding protein_coding MGP_BALBcJ_T0048275.1 MGP_BALBcJ_G0023906.1 mouse_genomes_project 17 56961234 56961796 - MGP_BALBcJ_P0048275 Pspn protein_coding protein_coding MGP_BALBcJ_T0046301.1 MGP_BALBcJ_G0023362.1 mouse_genomes_project 17 24904143 24904926 - MGP_BALBcJ_P0046301 protein_coding protein_coding MGP_BALBcJ_T0046303.1 MGP_BALBcJ_G0023362.1 mouse_genomes_project 17 24904184 24904790 - protein_coding retained_intron MGP_BALBcJ_T0046928.1 MGP_BALBcJ_G0023510.1 mouse_genomes_project 17 32896038 32904970 + MGP_BALBcJ_P0046928 Wdr46 protein_coding protein_coding MGP_BALBcJ_T0046929.1 MGP_BALBcJ_G0023510.1 mouse_genomes_project 17 32896095 32896838 + Wdr46 protein_coding retained_intron MGP_BALBcJ_T0046930.1 MGP_BALBcJ_G0023510.1 mouse_genomes_project 17 32896782 32899068 + Wdr46 protein_coding retained_intron MGP_BALBcJ_T0006909.1 MGP_BALBcJ_G0005684.1 mouse_genomes_project 17 28265635 28294268 - Gm26885 lincRNA lincRNA MGP_BALBcJ_T0048774.1 MGP_BALBcJ_G0024078.1 mouse_genomes_project 17 93573746 93579816 + MGP_BALBcJ_P0048774 Adcyap1 protein_coding protein_coding MGP_BALBcJ_T0048337.1 MGP_BALBcJ_G0023934.1 mouse_genomes_project 17 64877112 64880658 - MGP_BALBcJ_P0048337 4930583I09Rik protein_coding protein_coding MGP_BALBcJ_T0099589.1 MGP_BALBcJ_G0037625.1 mouse_genomes_project 17 86987982 86988092 - Gm22235 snRNA snRNA MGP_BALBcJ_T0045688.1 MGP_BALBcJ_G0023197.1 mouse_genomes_project 17 19742432 19763918 + MGP_BALBcJ_P0045688 Zfp948 protein_coding protein_coding MGP_BALBcJ_T0013193.1 MGP_BALBcJ_G0011290.1 mouse_genomes_project 17 20218245 20218925 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048061.1 MGP_BALBcJ_G0023829.1 mouse_genomes_project 17 48196748 48209354 + MGP_BALBcJ_P0048061 Treml2 protein_coding protein_coding MGP_BALBcJ_T0046162.1 MGP_BALBcJ_G0023334.1 mouse_genomes_project 17 24410062 24422221 + MGP_BALBcJ_P0046162 Fbxl16 protein_coding protein_coding MGP_BALBcJ_T0047243.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34133084 34134794 - Msh5 protein_coding processed_transcript MGP_BALBcJ_T0047244.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34133084 34151383 - MGP_BALBcJ_P0047244 Msh5 protein_coding protein_coding MGP_BALBcJ_T0047245.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34133084 34152161 - MGP_BALBcJ_P0047245 Msh5 protein_coding protein_coding MGP_BALBcJ_T0047246.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34133088 34138224 - MGP_BALBcJ_P0047246 Msh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047247.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34133161 34151303 - MGP_BALBcJ_P0047247 Msh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047248.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34133161 34151303 - MGP_BALBcJ_P0047248 Msh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047249.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34141316 34152180 - MGP_BALBcJ_P0047249 Msh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047250.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34143543 34147967 - Msh5 protein_coding retained_intron MGP_BALBcJ_T0047251.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34143543 34151286 - Msh5 protein_coding retained_intron MGP_BALBcJ_T0047252.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34148165 34150877 - Msh5 protein_coding retained_intron MGP_BALBcJ_T0047253.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34148174 34149211 - Msh5 protein_coding retained_intron MGP_BALBcJ_T0047254.1 MGP_BALBcJ_G0023574.1 mouse_genomes_project 17 34148299 34151281 - MGP_BALBcJ_P0047254 Msh5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048260.1 MGP_BALBcJ_G0023896.1 mouse_genomes_project 17 56686109 56692101 - MGP_BALBcJ_P0048260 Nrtn protein_coding protein_coding MGP_BALBcJ_T0011792.1 MGP_BALBcJ_G0009907.1 mouse_genomes_project 17 22021455 22024017 - MGP_BALBcJ_P0011792 Casp16-ps polymorphic_pseudogene polymorphic_pseudogene MGP_BALBcJ_T0011793.1 MGP_BALBcJ_G0009907.1 mouse_genomes_project 17 22021563 22023939 - MGP_BALBcJ_P0011793 Casp16-ps polymorphic_pseudogene protein_coding MGP_BALBcJ_T0046584.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28130408 28148045 - MGP_BALBcJ_P0046584 Mtch1 protein_coding protein_coding MGP_BALBcJ_T0046585.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28130412 28148045 - MGP_BALBcJ_P0046585 Mtch1 protein_coding protein_coding MGP_BALBcJ_T0046586.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28130450 28132342 - Mtch1 protein_coding processed_transcript MGP_BALBcJ_T0046587.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28132055 28132444 - Mtch1 protein_coding processed_transcript MGP_BALBcJ_T0046588.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28133560 28140285 - Mtch1 protein_coding retained_intron MGP_BALBcJ_T0046589.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28139663 28147312 - MGP_BALBcJ_P0046589 Mtch1 protein_coding protein_coding MGP_BALBcJ_T0046590.1 MGP_BALBcJ_G0023426.1 mouse_genomes_project 17 28140624 28142759 - Mtch1 protein_coding retained_intron MGP_BALBcJ_T0047553.1 MGP_BALBcJ_G0023646.1 mouse_genomes_project 17 36232329 36235720 + MGP_BALBcJ_P0047553 H2-M10.6 protein_coding protein_coding MGP_BALBcJ_T0000974.1 MGP_BALBcJ_G0000903.1 mouse_genomes_project 17 8559684 8562528 - TEC TEC MGP_BALBcJ_T0046318.1 MGP_BALBcJ_G0023368.1 mouse_genomes_project 17 25325041 25348177 + MGP_BALBcJ_P0046318 Atp6v0e protein_coding protein_coding MGP_BALBcJ_T0046319.1 MGP_BALBcJ_G0023368.1 mouse_genomes_project 17 25325057 25346484 + MGP_BALBcJ_P0046319 Atp6v0e protein_coding protein_coding MGP_BALBcJ_T0045846.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22705304 22736265 - MGP_BALBcJ_P0045846 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045847.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22705305 22736292 - MGP_BALBcJ_P0045847 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045848.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22707338 22736245 - MGP_BALBcJ_P0045848 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045849.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22708983 22736249 - MGP_BALBcJ_P0045849 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045850.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709156 22736244 - MGP_BALBcJ_P0045850 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045851.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709202 22736261 - MGP_BALBcJ_P0045851 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045852.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709213 22730676 - MGP_BALBcJ_P0045852 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045853.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709263 22736226 - MGP_BALBcJ_P0045853 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045854.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709263 22736253 - MGP_BALBcJ_P0045854 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045855.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709282 22736244 - MGP_BALBcJ_P0045855 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045856.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709283 22730676 - MGP_BALBcJ_P0045856 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045857.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22709430 22736255 - MGP_BALBcJ_P0045857 Tbc1d24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045858.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22710634 22711458 - Tbc1d24 protein_coding processed_transcript MGP_BALBcJ_T0045859.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22711832 22736212 - MGP_BALBcJ_P0045859 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0045860.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22720343 22736249 - Tbc1d24 protein_coding processed_transcript MGP_BALBcJ_T0045861.1 MGP_BALBcJ_G0023257.1 mouse_genomes_project 17 22734577 22740120 - MGP_BALBcJ_P0045861 Tbc1d24 protein_coding protein_coding MGP_BALBcJ_T0047373.1 MGP_BALBcJ_G0023606.1 mouse_genomes_project 17 34812389 34861300 + MGP_BALBcJ_P0047373 Sfta2 protein_coding protein_coding MGP_BALBcJ_T0047374.1 MGP_BALBcJ_G0023606.1 mouse_genomes_project 17 34812418 34861298 + Sfta2 protein_coding processed_transcript MGP_BALBcJ_T0047377.1 MGP_BALBcJ_G0023606.1 mouse_genomes_project 17 34860440 34861304 + MGP_BALBcJ_P0047377 Sfta2 protein_coding protein_coding MGP_BALBcJ_T0046096.1 MGP_BALBcJ_G0023315.1 mouse_genomes_project 17 23892773 23896646 + MGP_BALBcJ_P0046096 Prss29 protein_coding protein_coding MGP_BALBcJ_T0048160.1 MGP_BALBcJ_G0023861.1 mouse_genomes_project 17 55764244 55781219 - MGP_BALBcJ_P0048160 Zfp119a protein_coding protein_coding MGP_BALBcJ_T0045407.1 MGP_BALBcJ_G0023088.1 mouse_genomes_project 17 3833322 3879659 - MGP_BALBcJ_P0045407 Ezr protein_coding protein_coding MGP_BALBcJ_T0045408.1 MGP_BALBcJ_G0023088.1 mouse_genomes_project 17 3836118 3838105 - Ezr protein_coding processed_transcript MGP_BALBcJ_T0047646.1 MGP_BALBcJ_G0023682.1 mouse_genomes_project 17 37042425 37043420 - MGP_BALBcJ_P0047646 Olfr113 protein_coding protein_coding MGP_BALBcJ_T0045956.1 MGP_BALBcJ_G0023284.1 mouse_genomes_project 17 23284211 23284801 - Ndufb10 protein_coding retained_intron MGP_BALBcJ_T0045957.1 MGP_BALBcJ_G0023284.1 mouse_genomes_project 17 23284211 23285058 - Ndufb10 protein_coding retained_intron MGP_BALBcJ_T0045958.1 MGP_BALBcJ_G0023284.1 mouse_genomes_project 17 23284211 23286565 - Ndufb10 protein_coding retained_intron MGP_BALBcJ_T0045959.1 MGP_BALBcJ_G0023284.1 mouse_genomes_project 17 23284211 23286623 - MGP_BALBcJ_P0045959 Ndufb10 protein_coding protein_coding MGP_BALBcJ_T0045960.1 MGP_BALBcJ_G0023284.1 mouse_genomes_project 17 23284556 23286557 - MGP_BALBcJ_P0045960 Ndufb10 protein_coding protein_coding MGP_BALBcJ_T0045961.1 MGP_BALBcJ_G0023284.1 mouse_genomes_project 17 23284833 23286539 - Ndufb10 protein_coding processed_transcript MGP_BALBcJ_T0047426.1 MGP_BALBcJ_G0023614.1 mouse_genomes_project 17 35057853 35062230 - MGP_BALBcJ_P0047426 Tubb5 protein_coding protein_coding MGP_BALBcJ_T0047427.1 MGP_BALBcJ_G0023614.1 mouse_genomes_project 17 35059523 35060979 - Tubb5 protein_coding retained_intron MGP_BALBcJ_T0047428.1 MGP_BALBcJ_G0023614.1 mouse_genomes_project 17 35059819 35062132 - MGP_BALBcJ_P0047428 Tubb5 protein_coding protein_coding MGP_BALBcJ_T0047429.1 MGP_BALBcJ_G0023614.1 mouse_genomes_project 17 35060165 35062141 - Tubb5 protein_coding retained_intron MGP_BALBcJ_T0003752.1 MGP_BALBcJ_G0003375.1 mouse_genomes_project 17 44495986 44499690 + Runx2os2 antisense antisense MGP_BALBcJ_T0013207.1 MGP_BALBcJ_G0011304.1 mouse_genomes_project 17 33100477 33100690 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100848.1 MGP_BALBcJ_G0038884.1 mouse_genomes_project 17 73356753 73356858 + Gm25406 snoRNA snoRNA MGP_BALBcJ_T0017549.1 MGP_BALBcJ_G0015293.1 mouse_genomes_project 17 71703557 71752088 - Trmt61b processed_transcript processed_transcript MGP_BALBcJ_T0017550.1 MGP_BALBcJ_G0015293.1 mouse_genomes_project 17 71703592 71752079 - Trmt61b processed_transcript processed_transcript MGP_BALBcJ_T0017551.1 MGP_BALBcJ_G0015293.1 mouse_genomes_project 17 71738694 71751586 - Trmt61b processed_transcript processed_transcript MGP_BALBcJ_T0102285.1 MGP_BALBcJ_G0040101.1 mouse_genomes_project 17 17875321 17914110 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003731.1 MGP_BALBcJ_G0003358.1 mouse_genomes_project 17 32874971 32875850 - Gm19412 antisense antisense MGP_BALBcJ_T0003732.1 MGP_BALBcJ_G0003358.1 mouse_genomes_project 17 32875266 32875982 - Gm19412 antisense antisense MGP_BALBcJ_T0013208.1 MGP_BALBcJ_G0011305.1 mouse_genomes_project 17 33392710 33392999 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047679.1 MGP_BALBcJ_G0023710.1 mouse_genomes_project 17 38578139 38578847 - MGP_BALBcJ_P0047679 Gm21903 protein_coding protein_coding MGP_BALBcJ_T0048704.1 MGP_BALBcJ_G0024062.1 mouse_genomes_project 17 87701608 87744784 - MGP_BALBcJ_P0048704 1700011E24Rik protein_coding protein_coding MGP_BALBcJ_T0048705.1 MGP_BALBcJ_G0024062.1 mouse_genomes_project 17 87701613 87744730 - MGP_BALBcJ_P0048705 1700011E24Rik protein_coding protein_coding MGP_BALBcJ_T0048706.1 MGP_BALBcJ_G0024062.1 mouse_genomes_project 17 87727622 87744751 - MGP_BALBcJ_P0048706 1700011E24Rik protein_coding protein_coding MGP_BALBcJ_T0048707.1 MGP_BALBcJ_G0024062.1 mouse_genomes_project 17 87734030 87744678 - 1700011E24Rik protein_coding processed_transcript MGP_BALBcJ_T0048708.1 MGP_BALBcJ_G0024062.1 mouse_genomes_project 17 87734040 87744678 - 1700011E24Rik protein_coding processed_transcript MGP_BALBcJ_T0048620.1 MGP_BALBcJ_G0024031.1 mouse_genomes_project 17 83423835 83433695 + MGP_BALBcJ_P0048620 protein_coding unknown_likely_coding MGP_BALBcJ_T0048621.1 MGP_BALBcJ_G0024031.1 mouse_genomes_project 17 83428210 83429851 + protein_coding processed_transcript MGP_BALBcJ_T0048622.1 MGP_BALBcJ_G0024031.1 mouse_genomes_project 17 83428210 83432889 + MGP_BALBcJ_P0048622 protein_coding protein_coding MGP_BALBcJ_T0048623.1 MGP_BALBcJ_G0024031.1 mouse_genomes_project 17 83429143 83433200 + protein_coding processed_transcript MGP_BALBcJ_T0048277.1 MGP_BALBcJ_G0023908.1 mouse_genomes_project 17 56983629 56994011 - MGP_BALBcJ_P0048277 Khsrp protein_coding protein_coding MGP_BALBcJ_T0006923.1 MGP_BALBcJ_G0005697.1 mouse_genomes_project 17 34957936 34981240 - Gm20442 lincRNA lincRNA MGP_BALBcJ_T0017522.1 MGP_BALBcJ_G0015283.1 mouse_genomes_project 17 28699743 28706712 + Gm16758 processed_transcript processed_transcript MGP_BALBcJ_T0047678.1 MGP_BALBcJ_G0023709.1 mouse_genomes_project 17 38573784 38575617 + MGP_BALBcJ_P0047678 Esp24 protein_coding protein_coding MGP_BALBcJ_T0046059.1 MGP_BALBcJ_G0023306.1 mouse_genomes_project 17 23750019 23753127 + MGP_BALBcJ_P0046059 BC003965 protein_coding protein_coding MGP_BALBcJ_T0046942.1 MGP_BALBcJ_G0023513.1 mouse_genomes_project 17 32911127 32922266 + MGP_BALBcJ_P0046942 Vps52 protein_coding protein_coding MGP_BALBcJ_T0046943.1 MGP_BALBcJ_G0023513.1 mouse_genomes_project 17 32911230 32921233 + MGP_BALBcJ_P0046943 Vps52 protein_coding protein_coding MGP_BALBcJ_T0046944.1 MGP_BALBcJ_G0023513.1 mouse_genomes_project 17 32913372 32915817 + Vps52 protein_coding retained_intron MGP_BALBcJ_T0046945.1 MGP_BALBcJ_G0023513.1 mouse_genomes_project 17 32914340 32915846 + Vps52 protein_coding retained_intron MGP_BALBcJ_T0046946.1 MGP_BALBcJ_G0023513.1 mouse_genomes_project 17 32916457 32918902 + Vps52 protein_coding retained_intron MGP_BALBcJ_T0046947.1 MGP_BALBcJ_G0023513.1 mouse_genomes_project 17 32918469 32921549 + Vps52 protein_coding retained_intron MGP_BALBcJ_T0046225.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24530343 24542534 - MGP_BALBcJ_P0046225 Pigq protein_coding protein_coding MGP_BALBcJ_T0046226.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24530344 24547255 - Pigq protein_coding retained_intron MGP_BALBcJ_T0046227.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24530344 24547307 - MGP_BALBcJ_P0046227 Pigq protein_coding protein_coding MGP_BALBcJ_T0046228.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24530344 24547420 - MGP_BALBcJ_P0046228 Pigq protein_coding protein_coding MGP_BALBcJ_T0046229.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24531412 24540173 - MGP_BALBcJ_P0046229 Pigq protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046230.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24531519 24536912 - Pigq protein_coding retained_intron MGP_BALBcJ_T0046231.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24531561 24541433 - MGP_BALBcJ_P0046231 Pigq protein_coding protein_coding MGP_BALBcJ_T0046232.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24535567 24536652 - Pigq protein_coding retained_intron MGP_BALBcJ_T0046233.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24539367 24547307 - Pigq protein_coding retained_intron MGP_BALBcJ_T0046234.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24540450 24547305 - MGP_BALBcJ_P0046234 Pigq protein_coding protein_coding MGP_BALBcJ_T0046235.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24541846 24547301 - Pigq protein_coding retained_intron MGP_BALBcJ_T0046236.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24542452 24548236 - MGP_BALBcJ_P0046236 Pigq protein_coding protein_coding MGP_BALBcJ_T0046237.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24542506 24542834 - MGP_BALBcJ_P0046237 Pigq protein_coding protein_coding MGP_BALBcJ_T0046238.1 MGP_BALBcJ_G0023346.1 mouse_genomes_project 17 24542635 24548206 - MGP_BALBcJ_P0046238 Pigq protein_coding protein_coding MGP_BALBcJ_T0013266.1 MGP_BALBcJ_G0011363.1 mouse_genomes_project 17 70481202 70481646 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048139.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53457475 53512757 + Kat2b protein_coding processed_transcript MGP_BALBcJ_T0048140.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53457585 53561236 + MGP_BALBcJ_P0048140 Kat2b protein_coding protein_coding MGP_BALBcJ_T0048141.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53475604 53526155 + MGP_BALBcJ_P0048141 Kat2b protein_coding protein_coding MGP_BALBcJ_T0048142.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53532428 53560587 + MGP_BALBcJ_P0048142 Kat2b protein_coding protein_coding MGP_BALBcJ_T0048143.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53547747 53552166 + Kat2b protein_coding retained_intron MGP_BALBcJ_T0048144.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53547820 53552189 + Kat2b protein_coding retained_intron MGP_BALBcJ_T0048145.1 MGP_BALBcJ_G0023851.1 mouse_genomes_project 17 53547904 53559202 + MGP_BALBcJ_P0048145 Kat2b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099564.1 MGP_BALBcJ_G0037600.1 mouse_genomes_project 17 32650541 32650617 + Gm22943 snRNA snRNA MGP_BALBcJ_T0046420.1 MGP_BALBcJ_G0023394.1 mouse_genomes_project 17 26650042 26803426 + MGP_BALBcJ_P0046420 Anks1 protein_coding protein_coding MGP_BALBcJ_T0046421.1 MGP_BALBcJ_G0023394.1 mouse_genomes_project 17 26650074 26803423 + MGP_BALBcJ_P0046421 Anks1 protein_coding protein_coding MGP_BALBcJ_T0046422.1 MGP_BALBcJ_G0023394.1 mouse_genomes_project 17 26650074 26803423 + MGP_BALBcJ_P0046422 Anks1 protein_coding protein_coding MGP_BALBcJ_T0046423.1 MGP_BALBcJ_G0023394.1 mouse_genomes_project 17 26748389 26803425 + Anks1 protein_coding processed_transcript MGP_BALBcJ_T0046605.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28420567 28447521 + MGP_BALBcJ_P0046605 Rnf8 protein_coding protein_coding MGP_BALBcJ_T0046606.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28420599 28432769 + MGP_BALBcJ_P0046606 Rnf8 protein_coding protein_coding MGP_BALBcJ_T0046607.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28420631 28447444 + MGP_BALBcJ_P0046607 Rnf8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046609.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28420667 28425337 + Rnf8 protein_coding processed_transcript MGP_BALBcJ_T0046610.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28421914 28432802 + MGP_BALBcJ_P0046610 Rnf8 protein_coding protein_coding MGP_BALBcJ_T0046611.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28434364 28441703 + Rnf8 protein_coding retained_intron MGP_BALBcJ_T0046612.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28437320 28447392 + Rnf8 protein_coding retained_intron MGP_BALBcJ_T0046613.1 MGP_BALBcJ_G0023432.1 mouse_genomes_project 17 28440255 28447413 + Rnf8 protein_coding retained_intron MGP_BALBcJ_T0048149.1 MGP_BALBcJ_G0023853.1 mouse_genomes_project 17 53743954 53760976 - MGP_BALBcJ_P0048149 Sult1c2 protein_coding protein_coding MGP_BALBcJ_T0047548.1 MGP_BALBcJ_G0023642.1 mouse_genomes_project 17 35913293 35915467 + MGP_BALBcJ_P0047548 H2-M11 protein_coding protein_coding MGP_BALBcJ_T0102365.1 MGP_BALBcJ_G0040181.1 mouse_genomes_project 17 55749822 55750470 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006924.1 MGP_BALBcJ_G0005698.1 mouse_genomes_project 17 34989462 34997957 + 4833427F10Rik lincRNA lincRNA MGP_BALBcJ_T0048402.1 MGP_BALBcJ_G0023955.1 mouse_genomes_project 17 69258438 69394432 + MGP_BALBcJ_P0048402 Epb41l3 protein_coding protein_coding MGP_BALBcJ_T0048403.1 MGP_BALBcJ_G0023955.1 mouse_genomes_project 17 69258438 69394432 + MGP_BALBcJ_P0048403 Epb41l3 protein_coding protein_coding MGP_BALBcJ_T0048404.1 MGP_BALBcJ_G0023955.1 mouse_genomes_project 17 69305958 69394438 + MGP_BALBcJ_P0048404 Epb41l3 protein_coding unknown_likely_coding MGP_BALBcJ_T0003706.1 MGP_BALBcJ_G0003340.1 mouse_genomes_project 17 22333711 22339166 - Gm15947 antisense antisense MGP_BALBcJ_T0047595.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36426869 36436225 + MGP_BALBcJ_P0047595 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047596.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428109 36435035 + MGP_BALBcJ_P0047596 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047597.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428152 36436225 + MGP_BALBcJ_P0047597 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047598.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428181 36431676 + MGP_BALBcJ_P0047598 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047599.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428196 36429452 + Zfp57 protein_coding retained_intron MGP_BALBcJ_T0047600.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428204 36429330 + Zfp57 protein_coding retained_intron MGP_BALBcJ_T0047601.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428223 36435416 + MGP_BALBcJ_P0047601 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047602.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428239 36431661 + MGP_BALBcJ_P0047602 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047603.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428297 36435339 + MGP_BALBcJ_P0047603 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047604.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36428665 36436228 + MGP_BALBcJ_P0047604 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047605.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36429293 36436225 + MGP_BALBcJ_P0047605 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047606.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36430159 36435308 + MGP_BALBcJ_P0047606 Zfp57 protein_coding protein_coding MGP_BALBcJ_T0047607.1 MGP_BALBcJ_G0023658.1 mouse_genomes_project 17 36430240 36431843 + Zfp57 protein_coding retained_intron MGP_BALBcJ_T0045593.1 MGP_BALBcJ_G0023142.1 mouse_genomes_project 17 13059893 13067944 - MGP_BALBcJ_P0045593 Pdcd2 protein_coding protein_coding MGP_BALBcJ_T0045594.1 MGP_BALBcJ_G0023142.1 mouse_genomes_project 17 13062260 13067964 - MGP_BALBcJ_P0045594 Pdcd2 protein_coding protein_coding MGP_BALBcJ_T0045595.1 MGP_BALBcJ_G0023142.1 mouse_genomes_project 17 13062278 13062829 - Pdcd2 protein_coding retained_intron MGP_BALBcJ_T0045596.1 MGP_BALBcJ_G0023142.1 mouse_genomes_project 17 13063388 13067747 - Pdcd2 protein_coding retained_intron MGP_BALBcJ_T0045597.1 MGP_BALBcJ_G0023142.1 mouse_genomes_project 17 13063476 13067649 - Pdcd2 protein_coding retained_intron MGP_BALBcJ_T0013238.1 MGP_BALBcJ_G0011335.1 mouse_genomes_project 17 37951090 37951220 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102328.1 MGP_BALBcJ_G0040144.1 mouse_genomes_project 17 35424060 35425262 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047660.1 MGP_BALBcJ_G0023696.1 mouse_genomes_project 17 37400331 37401426 + MGP_BALBcJ_P0047660 Olfr127 protein_coding protein_coding MGP_BALBcJ_T0048539.1 MGP_BALBcJ_G0023992.1 mouse_genomes_project 17 75178077 75576324 + MGP_BALBcJ_P0048539 Ltbp1 protein_coding protein_coding MGP_BALBcJ_T0048540.1 MGP_BALBcJ_G0023992.1 mouse_genomes_project 17 75356527 75529835 + MGP_BALBcJ_P0048540 Ltbp1 protein_coding protein_coding MGP_BALBcJ_T0048541.1 MGP_BALBcJ_G0023992.1 mouse_genomes_project 17 75356527 75575893 + MGP_BALBcJ_P0048541 Ltbp1 protein_coding protein_coding MGP_BALBcJ_T0048542.1 MGP_BALBcJ_G0023992.1 mouse_genomes_project 17 75356628 75575883 + MGP_BALBcJ_P0048542 Ltbp1 protein_coding protein_coding MGP_BALBcJ_T0048543.1 MGP_BALBcJ_G0023992.1 mouse_genomes_project 17 75470533 75474911 + Ltbp1 protein_coding retained_intron MGP_BALBcJ_T0048544.1 MGP_BALBcJ_G0023992.1 mouse_genomes_project 17 75568766 75577069 + Ltbp1 protein_coding retained_intron MGP_BALBcJ_T0047265.1 MGP_BALBcJ_G0023579.1 mouse_genomes_project 17 34181817 34184922 - MGP_BALBcJ_P0047265 Ly6g6d protein_coding protein_coding MGP_BALBcJ_T0047266.1 MGP_BALBcJ_G0023579.1 mouse_genomes_project 17 34181851 34188560 - Ly6g6d protein_coding processed_transcript MGP_BALBcJ_T0047267.1 MGP_BALBcJ_G0023579.1 mouse_genomes_project 17 34181919 34184886 - Ly6g6d protein_coding retained_intron MGP_BALBcJ_T0047268.1 MGP_BALBcJ_G0023579.1 mouse_genomes_project 17 34184331 34188560 - Ly6g6d protein_coding retained_intron MGP_BALBcJ_T0047269.1 MGP_BALBcJ_G0023579.1 mouse_genomes_project 17 34184634 34188551 - Ly6g6d protein_coding processed_transcript MGP_BALBcJ_T0047517.1 MGP_BALBcJ_G0023630.1 mouse_genomes_project 17 35284716 35305634 + MGP_BALBcJ_P0047517 protein_coding protein_coding MGP_BALBcJ_T0102351.1 MGP_BALBcJ_G0040167.1 mouse_genomes_project 17 36721061 36722519 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000992.1 MGP_BALBcJ_G0000920.1 mouse_genomes_project 17 80026339 80044067 - TEC TEC MGP_BALBcJ_T0013237.1 MGP_BALBcJ_G0011334.1 mouse_genomes_project 17 37583166 37584028 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047836.1 MGP_BALBcJ_G0023765.1 mouse_genomes_project 17 45949583 45959876 - MGP_BALBcJ_P0047836 Mad2l1bp protein_coding protein_coding MGP_BALBcJ_T0045661.1 MGP_BALBcJ_G0023179.1 mouse_genomes_project 17 18788766 18789663 + MGP_BALBcJ_P0045661 Vmn1r226 protein_coding protein_coding MGP_BALBcJ_T0046520.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27587235 27626856 + MGP_BALBcJ_P0046520 Brpf3 protein_coding protein_coding MGP_BALBcJ_T0046521.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27587930 27592455 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0046522.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27598156 27605545 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0046523.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27599048 27626803 + Brpf3 protein_coding retained_intron MGP_BALBcJ_T0046524.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27602840 27605931 + Brpf3 protein_coding retained_intron MGP_BALBcJ_T0046525.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27602993 27606169 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0046526.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27610937 27625008 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0046527.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27611892 27625046 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0046528.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27611972 27626851 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0046529.1 MGP_BALBcJ_G0023413.1 mouse_genomes_project 17 27616380 27625101 + Brpf3 protein_coding processed_transcript MGP_BALBcJ_T0047210.1 MGP_BALBcJ_G0023567.1 mouse_genomes_project 17 34050969 34053086 - MGP_BALBcJ_P0047210 Hspa1a protein_coding protein_coding MGP_BALBcJ_T0048162.1 MGP_BALBcJ_G0023863.1 mouse_genomes_project 17 55858080 55862479 + MGP_BALBcJ_P0048162 Ebi3 protein_coding protein_coding MGP_BALBcJ_T0048461.1 MGP_BALBcJ_G0023965.1 mouse_genomes_project 17 71359080 71418464 - MGP_BALBcJ_P0048461 Emilin2 protein_coding protein_coding MGP_BALBcJ_T0006965.1 MGP_BALBcJ_G0005727.1 mouse_genomes_project 17 87127560 87128247 + Gm29168 lincRNA lincRNA MGP_BALBcJ_T0046142.1 MGP_BALBcJ_G0023327.1 mouse_genomes_project 17 24332493 24346098 + MGP_BALBcJ_P0046142 Mslnl protein_coding protein_coding MGP_BALBcJ_T0047030.1 MGP_BALBcJ_G0023531.1 mouse_genomes_project 17 33218107 33221413 - MGP_BALBcJ_P0047030 Gm15821 protein_coding protein_coding MGP_BALBcJ_T0046158.1 MGP_BALBcJ_G0023331.1 mouse_genomes_project 17 24385028 24389350 + MGP_BALBcJ_P0046158 Ccdc78 protein_coding protein_coding MGP_BALBcJ_T0006942.1 MGP_BALBcJ_G0005710.1 mouse_genomes_project 17 52072962 52086862 + Gm19585 lincRNA lincRNA MGP_BALBcJ_T0006943.1 MGP_BALBcJ_G0005710.1 mouse_genomes_project 17 52083665 52086657 + Gm19585 lincRNA lincRNA MGP_BALBcJ_T0013184.1 MGP_BALBcJ_G0011281.1 mouse_genomes_project 17 10089113 10089858 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0011404.1 MGP_BALBcJ_G0009529.1 mouse_genomes_project 17 36389361 36389437 - Gm27735 misc_RNA misc_RNA MGP_BALBcJ_T0006964.1 MGP_BALBcJ_G0005726.1 mouse_genomes_project 17 86052478 86080885 - Gm29418 lincRNA lincRNA MGP_BALBcJ_T0102326.1 MGP_BALBcJ_G0040142.1 mouse_genomes_project 17 35276665 35378680 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100849.1 MGP_BALBcJ_G0038885.1 mouse_genomes_project 17 74167473 74167616 + Gm24475 snoRNA snoRNA MGP_BALBcJ_T0048255.1 MGP_BALBcJ_G0023892.1 mouse_genomes_project 17 56557772 56595606 + MGP_BALBcJ_P0048255 Catsperd protein_coding protein_coding MGP_BALBcJ_T0047060.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33610107 33634230 + MGP_BALBcJ_P0047060 Notch4 protein_coding protein_coding MGP_BALBcJ_T0047061.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33610137 33611456 + Notch4 protein_coding processed_transcript MGP_BALBcJ_T0047062.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33610176 33633958 + MGP_BALBcJ_P0047062 Notch4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047063.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33610285 33633840 + MGP_BALBcJ_P0047063 Notch4 protein_coding unknown_likely_coding MGP_BALBcJ_T0047064.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33610975 33611417 + Notch4 protein_coding retained_intron MGP_BALBcJ_T0047065.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33623852 33628192 + Notch4 protein_coding processed_transcript MGP_BALBcJ_T0047066.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33629592 33632349 + MGP_BALBcJ_P0047066 Notch4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047067.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33629592 33632401 + MGP_BALBcJ_P0047067 Notch4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047068.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33630283 33631379 + Notch4 protein_coding retained_intron MGP_BALBcJ_T0047069.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33631391 33632350 + Notch4 protein_coding retained_intron MGP_BALBcJ_T0047070.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33632001 33633200 + Notch4 protein_coding retained_intron MGP_BALBcJ_T0047071.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33632671 33633228 + Notch4 protein_coding processed_transcript MGP_BALBcJ_T0047072.1 MGP_BALBcJ_G0023542.1 mouse_genomes_project 17 33632767 33633545 + Notch4 protein_coding processed_transcript MGP_BALBcJ_T0100834.1 MGP_BALBcJ_G0038870.1 mouse_genomes_project 17 34055913 34055976 - Gm25744 snoRNA snoRNA MGP_BALBcJ_T0045470.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 8127695 8824729 + Park2 protein_coding retained_intron MGP_BALBcJ_T0045471.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 8127695 8824729 + Park2 protein_coding retained_intron MGP_BALBcJ_T0045472.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 8127695 9325055 + MGP_BALBcJ_P0045472 Park2 protein_coding protein_coding MGP_BALBcJ_T0045473.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 8127702 8231475 + Park2 protein_coding processed_transcript MGP_BALBcJ_T0045474.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 8341479 8765036 + MGP_BALBcJ_P0045474 Park2 protein_coding protein_coding MGP_BALBcJ_T0045475.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 8574277 8880450 + MGP_BALBcJ_P0045475 Park2 protein_coding protein_coding MGP_BALBcJ_T0045476.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 9098631 9325055 + MGP_BALBcJ_P0045476 Park2 protein_coding protein_coding MGP_BALBcJ_T0045477.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 9110969 9134287 + Park2 protein_coding processed_transcript MGP_BALBcJ_T0045478.1 MGP_BALBcJ_G0023110.1 mouse_genomes_project 17 9289205 9325050 + Park2 protein_coding processed_transcript MGP_BALBcJ_T0047890.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46246640 46249489 + MGP_BALBcJ_P0047890 Crip3 protein_coding protein_coding MGP_BALBcJ_T0047891.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46246656 46249290 + Crip3 protein_coding retained_intron MGP_BALBcJ_T0047892.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46246656 46249484 + MGP_BALBcJ_P0047892 Crip3 protein_coding protein_coding MGP_BALBcJ_T0047893.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46246665 46249128 + MGP_BALBcJ_P0047893 Crip3 protein_coding protein_coding MGP_BALBcJ_T0047894.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46246684 46248198 + Crip3 protein_coding processed_transcript MGP_BALBcJ_T0047895.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46248387 46249435 + Crip3 protein_coding retained_intron MGP_BALBcJ_T0047896.1 MGP_BALBcJ_G0023776.1 mouse_genomes_project 17 46248677 46249410 + Crip3 protein_coding retained_intron MGP_BALBcJ_T0045518.1 MGP_BALBcJ_G0023123.1 mouse_genomes_project 17 10208154 10228954 - MGP_BALBcJ_P0045518 Acat3 protein_coding protein_coding MGP_BALBcJ_T0046922.1 MGP_BALBcJ_G0023509.1 mouse_genomes_project 17 32894192 32895715 - MGP_BALBcJ_P0046922 Pfdn6 protein_coding protein_coding MGP_BALBcJ_T0046923.1 MGP_BALBcJ_G0023509.1 mouse_genomes_project 17 32894281 32895702 - MGP_BALBcJ_P0046923 Pfdn6 protein_coding protein_coding MGP_BALBcJ_T0046924.1 MGP_BALBcJ_G0023509.1 mouse_genomes_project 17 32894290 32895697 - MGP_BALBcJ_P0046924 Pfdn6 protein_coding protein_coding MGP_BALBcJ_T0046925.1 MGP_BALBcJ_G0023509.1 mouse_genomes_project 17 32894294 32895676 - MGP_BALBcJ_P0046925 Pfdn6 protein_coding protein_coding MGP_BALBcJ_T0046926.1 MGP_BALBcJ_G0023509.1 mouse_genomes_project 17 32894317 32895702 - MGP_BALBcJ_P0046926 Pfdn6 protein_coding protein_coding MGP_BALBcJ_T0046927.1 MGP_BALBcJ_G0023509.1 mouse_genomes_project 17 32894729 32895191 - Pfdn6 protein_coding retained_intron MGP_BALBcJ_T0011397.1 MGP_BALBcJ_G0009522.1 mouse_genomes_project 17 10041053 10041305 + Gm23833 misc_RNA misc_RNA MGP_BALBcJ_T0046842.1 MGP_BALBcJ_G0023495.1 mouse_genomes_project 17 32553342 32560985 + MGP_BALBcJ_P0046842 Pram1 protein_coding protein_coding MGP_BALBcJ_T0046843.1 MGP_BALBcJ_G0023495.1 mouse_genomes_project 17 32553381 32560979 + MGP_BALBcJ_P0046843 Pram1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046844.1 MGP_BALBcJ_G0023495.1 mouse_genomes_project 17 32560082 32560908 + Pram1 protein_coding retained_intron MGP_BALBcJ_T0045632.1 MGP_BALBcJ_G0023153.1 mouse_genomes_project 17 15485708 15574498 + MGP_BALBcJ_P0045632 protein_coding protein_coding MGP_BALBcJ_T0045635.1 MGP_BALBcJ_G0023153.1 mouse_genomes_project 17 15572476 15574498 + MGP_BALBcJ_P0045635 protein_coding protein_coding MGP_BALBcJ_T0010172.1 MGP_BALBcJ_G0008297.1 mouse_genomes_project 17 26059745 26059804 + Mir7218 miRNA miRNA MGP_BALBcJ_T0045614.1 MGP_BALBcJ_G0023148.1 mouse_genomes_project 17 15284445 15316237 + MGP_BALBcJ_P0045614 Vmn2r90 protein_coding protein_coding MGP_BALBcJ_T0045820.1 MGP_BALBcJ_G0023250.1 mouse_genomes_project 17 22545332 22552855 + MGP_BALBcJ_P0045820 Gm5225 protein_coding protein_coding MGP_BALBcJ_T0048475.1 MGP_BALBcJ_G0023969.1 mouse_genomes_project 17 71698666 71728865 + MGP_BALBcJ_P0048475 Spdya protein_coding protein_coding MGP_BALBcJ_T0048476.1 MGP_BALBcJ_G0023969.1 mouse_genomes_project 17 71698666 71739671 + MGP_BALBcJ_P0048476 Spdya protein_coding protein_coding MGP_BALBcJ_T0048477.1 MGP_BALBcJ_G0023969.1 mouse_genomes_project 17 71698677 71739671 + MGP_BALBcJ_P0048477 Spdya protein_coding protein_coding MGP_BALBcJ_T0048478.1 MGP_BALBcJ_G0023969.1 mouse_genomes_project 17 71702788 71738812 + MGP_BALBcJ_P0048478 Spdya protein_coding protein_coding MGP_BALBcJ_T0102309.1 MGP_BALBcJ_G0040125.1 mouse_genomes_project 17 32201499 32224266 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006885.1 MGP_BALBcJ_G0005666.1 mouse_genomes_project 17 19711876 19719560 - 9330136K24Rik lincRNA lincRNA MGP_BALBcJ_T0045682.1 MGP_BALBcJ_G0023193.1 mouse_genomes_project 17 19594772 19607086 + MGP_BALBcJ_P0045682 Zfp54 protein_coding protein_coding MGP_BALBcJ_T0045683.1 MGP_BALBcJ_G0023193.1 mouse_genomes_project 17 19594778 19606600 + MGP_BALBcJ_P0045683 Zfp54 protein_coding protein_coding MGP_BALBcJ_T0045684.1 MGP_BALBcJ_G0023193.1 mouse_genomes_project 17 19594803 19605391 + MGP_BALBcJ_P0045684 Zfp54 protein_coding protein_coding MGP_BALBcJ_T0047573.1 MGP_BALBcJ_G0023652.1 mouse_genomes_project 17 36364840 36369907 + MGP_BALBcJ_P0047573 Rnf39 protein_coding protein_coding MGP_BALBcJ_T0047574.1 MGP_BALBcJ_G0023652.1 mouse_genomes_project 17 36364977 36367534 + MGP_BALBcJ_P0047574 Rnf39 protein_coding protein_coding MGP_BALBcJ_T0047575.1 MGP_BALBcJ_G0023652.1 mouse_genomes_project 17 36366996 36369207 + MGP_BALBcJ_P0047575 Rnf39 protein_coding protein_coding MGP_BALBcJ_T0006940.1 MGP_BALBcJ_G0005709.1 mouse_genomes_project 17 50158659 50165965 + AY702103 lincRNA lincRNA MGP_BALBcJ_T0006941.1 MGP_BALBcJ_G0005709.1 mouse_genomes_project 17 50158855 50160976 + AY702103 lincRNA lincRNA MGP_BALBcJ_T0046713.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30892355 30919135 + MGP_BALBcJ_P0046713 Rrp1b protein_coding protein_coding MGP_BALBcJ_T0046714.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30892658 30904192 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0046715.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30892684 30904185 + MGP_BALBcJ_P0046715 Rrp1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046716.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30904554 30919126 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0046717.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30905076 30908070 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0046718.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30906288 30907949 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0046719.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30908073 30912872 + MGP_BALBcJ_P0046719 Rrp1b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046720.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30908541 30912885 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0046721.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30912188 30913301 + Rrp1b protein_coding processed_transcript MGP_BALBcJ_T0046722.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30914558 30916843 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0046723.1 MGP_BALBcJ_G0023459.1 mouse_genomes_project 17 30915437 30916936 + Rrp1b protein_coding retained_intron MGP_BALBcJ_T0006920.1 MGP_BALBcJ_G0005694.1 mouse_genomes_project 17 33687985 33691120 - Gm20461 lincRNA lincRNA MGP_BALBcJ_T0013186.1 MGP_BALBcJ_G0011283.1 mouse_genomes_project 17 10255080 10255503 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102303.1 MGP_BALBcJ_G0040119.1 mouse_genomes_project 17 21490439 21490959 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047964.1 MGP_BALBcJ_G0023804.1 mouse_genomes_project 17 47240555 47248103 + MGP_BALBcJ_P0047964 Guca1b protein_coding protein_coding MGP_BALBcJ_T0047965.1 MGP_BALBcJ_G0023804.1 mouse_genomes_project 17 47240566 47247229 + MGP_BALBcJ_P0047965 Guca1b protein_coding protein_coding MGP_BALBcJ_T0013279.1 MGP_BALBcJ_G0011376.1 mouse_genomes_project 17 92020484 92021711 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102298.1 MGP_BALBcJ_G0040114.1 mouse_genomes_project 17 19442680 19442863 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010186.1 MGP_BALBcJ_G0008311.1 mouse_genomes_project 17 34319078 34319161 - Mir6974 miRNA miRNA MGP_BALBcJ_T0102297.1 MGP_BALBcJ_G0040113.1 mouse_genomes_project 17 19405392 19418975 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046499.1 MGP_BALBcJ_G0023408.1 mouse_genomes_project 17 27345622 27353523 + MGP_BALBcJ_P0046499 Lhfpl5 protein_coding protein_coding MGP_BALBcJ_T0046070.1 MGP_BALBcJ_G0023310.1 mouse_genomes_project 17 23809327 23811941 + MGP_BALBcJ_P0046070 Tsr3 protein_coding protein_coding MGP_BALBcJ_T0048627.1 MGP_BALBcJ_G0024033.1 mouse_genomes_project 17 83720909 83733850 - MGP_BALBcJ_P0048627 Cox7a2l protein_coding protein_coding MGP_BALBcJ_T0048628.1 MGP_BALBcJ_G0024033.1 mouse_genomes_project 17 83720909 83733850 - MGP_BALBcJ_P0048628 Cox7a2l protein_coding protein_coding MGP_BALBcJ_T0000976.1 MGP_BALBcJ_G0000905.1 mouse_genomes_project 17 29305662 29307126 + TEC TEC MGP_BALBcJ_T0000977.1 MGP_BALBcJ_G0000905.1 mouse_genomes_project 17 29306512 29306965 + TEC TEC MGP_BALBcJ_T0013265.1 MGP_BALBcJ_G0011362.1 mouse_genomes_project 17 68483333 68483864 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045689.1 MGP_BALBcJ_G0023198.1 mouse_genomes_project 17 19864237 19869391 + MGP_BALBcJ_P0045689 Zfp983 protein_coding protein_coding MGP_BALBcJ_T0047937.1 MGP_BALBcJ_G0023793.1 mouse_genomes_project 17 46569379 46586733 - MGP_BALBcJ_P0047937 Cnpy3 protein_coding protein_coding MGP_BALBcJ_T0047938.1 MGP_BALBcJ_G0023793.1 mouse_genomes_project 17 46569430 46586716 - MGP_BALBcJ_P0047938 Cnpy3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047939.1 MGP_BALBcJ_G0023793.1 mouse_genomes_project 17 46570327 46571302 - Cnpy3 protein_coding retained_intron MGP_BALBcJ_T0047940.1 MGP_BALBcJ_G0023793.1 mouse_genomes_project 17 46581505 46586714 - MGP_BALBcJ_P0047940 Cnpy3 protein_coding protein_coding MGP_BALBcJ_T0047941.1 MGP_BALBcJ_G0023793.1 mouse_genomes_project 17 46581737 46586696 - Cnpy3 protein_coding retained_intron MGP_BALBcJ_T0047915.1 MGP_BALBcJ_G0023785.1 mouse_genomes_project 17 46478690 46482592 + MGP_BALBcJ_P0047915 Mrpl2 protein_coding protein_coding MGP_BALBcJ_T0047916.1 MGP_BALBcJ_G0023785.1 mouse_genomes_project 17 46478696 46480121 + Mrpl2 protein_coding processed_transcript MGP_BALBcJ_T0047917.1 MGP_BALBcJ_G0023785.1 mouse_genomes_project 17 46478723 46482593 + MGP_BALBcJ_P0047917 Mrpl2 protein_coding protein_coding MGP_BALBcJ_T0047918.1 MGP_BALBcJ_G0023785.1 mouse_genomes_project 17 46481465 46482452 + Mrpl2 protein_coding processed_transcript MGP_BALBcJ_T0048266.1 MGP_BALBcJ_G0023900.1 mouse_genomes_project 17 56780130 56835282 - MGP_BALBcJ_P0048266 Acsbg2 protein_coding protein_coding MGP_BALBcJ_T0046239.1 MGP_BALBcJ_G0023347.1 mouse_genomes_project 17 24547604 24550575 - MGP_BALBcJ_P0046239 Nhlrc4 protein_coding protein_coding MGP_BALBcJ_T0013190.1 MGP_BALBcJ_G0011287.1 mouse_genomes_project 17 13110188 13110446 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048137.1 MGP_BALBcJ_G0023849.1 mouse_genomes_project 17 53367520 53394738 + MGP_BALBcJ_P0048137 Rab5a protein_coding protein_coding MGP_BALBcJ_T0011421.1 MGP_BALBcJ_G0009546.1 mouse_genomes_project 17 85870790 85870983 + Gm27427 misc_RNA misc_RNA MGP_BALBcJ_T0013206.1 MGP_BALBcJ_G0011303.1 mouse_genomes_project 17 33038683 33041193 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048607.1 MGP_BALBcJ_G0024022.1 mouse_genomes_project 17 80612258 80612582 - MGP_BALBcJ_P0048607 Gm10190 protein_coding protein_coding MGP_BALBcJ_T0047073.1 MGP_BALBcJ_G0023543.1 mouse_genomes_project 17 33635536 33637485 + MGP_BALBcJ_P0047073 Gpsm3 protein_coding protein_coding MGP_BALBcJ_T0047074.1 MGP_BALBcJ_G0023543.1 mouse_genomes_project 17 33635822 33637485 + MGP_BALBcJ_P0047074 Gpsm3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047075.1 MGP_BALBcJ_G0023543.1 mouse_genomes_project 17 33635961 33637371 + MGP_BALBcJ_P0047075 Gpsm3 protein_coding protein_coding MGP_BALBcJ_T0047122.1 MGP_BALBcJ_G0023551.1 mouse_genomes_project 17 33691906 33693467 + MGP_BALBcJ_P0047122 Fkbpl protein_coding protein_coding MGP_BALBcJ_T0047123.1 MGP_BALBcJ_G0023551.1 mouse_genomes_project 17 33691983 33692465 + MGP_BALBcJ_P0047123 Fkbpl protein_coding protein_coding MGP_BALBcJ_T0047760.1 MGP_BALBcJ_G0023750.1 mouse_genomes_project 17 45297435 45311617 + MGP_BALBcJ_P0047760 Aars2 protein_coding protein_coding MGP_BALBcJ_T0048649.1 MGP_BALBcJ_G0024042.1 mouse_genomes_project 17 84923139 84941025 + MGP_BALBcJ_P0048649 Abcg8 protein_coding protein_coding MGP_BALBcJ_T0048650.1 MGP_BALBcJ_G0024042.1 mouse_genomes_project 17 84923250 84939491 + MGP_BALBcJ_P0048650 Abcg8 protein_coding protein_coding MGP_BALBcJ_T0047637.1 MGP_BALBcJ_G0023676.1 mouse_genomes_project 17 36905765 36906803 + MGP_BALBcJ_P0047637 protein_coding protein_coding MGP_BALBcJ_T0045479.1 MGP_BALBcJ_G0023111.1 mouse_genomes_project 17 9379966 9477083 + MGP_BALBcJ_P0045479 Agpat4 protein_coding protein_coding MGP_BALBcJ_T0045480.1 MGP_BALBcJ_G0023111.1 mouse_genomes_project 17 9380569 9485986 + MGP_BALBcJ_P0045480 Agpat4 protein_coding protein_coding MGP_BALBcJ_T0045481.1 MGP_BALBcJ_G0023111.1 mouse_genomes_project 17 9380591 9401327 + Agpat4 protein_coding processed_transcript MGP_BALBcJ_T0045482.1 MGP_BALBcJ_G0023111.1 mouse_genomes_project 17 9413365 9476734 + MGP_BALBcJ_P0045482 Agpat4 protein_coding protein_coding MGP_BALBcJ_T0045483.1 MGP_BALBcJ_G0023111.1 mouse_genomes_project 17 9413445 9485434 + MGP_BALBcJ_P0045483 Agpat4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045484.1 MGP_BALBcJ_G0023111.1 mouse_genomes_project 17 9481495 9485608 + Agpat4 protein_coding retained_intron MGP_BALBcJ_T0102331.1 MGP_BALBcJ_G0040147.1 mouse_genomes_project 17 35481986 35482919 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047974.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364012 47459772 + MGP_BALBcJ_P0047974 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047975.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364040 47459167 + MGP_BALBcJ_P0047975 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047976.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364117 47460328 + MGP_BALBcJ_P0047976 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047977.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364123 47440688 + Ccnd3 protein_coding retained_intron MGP_BALBcJ_T0047978.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364180 47441088 + Ccnd3 protein_coding retained_intron MGP_BALBcJ_T0047979.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364192 47455501 + MGP_BALBcJ_P0047979 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047980.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364201 47440860 + Ccnd3 protein_coding retained_intron MGP_BALBcJ_T0047981.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364202 47366872 + Ccnd3 protein_coding retained_intron MGP_BALBcJ_T0047982.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47364202 47460350 + MGP_BALBcJ_P0047982 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047983.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47455152 47459876 + Ccnd3 protein_coding retained_intron MGP_BALBcJ_T0047984.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47455245 47459281 + MGP_BALBcJ_P0047984 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047985.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47455371 47461398 + MGP_BALBcJ_P0047985 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047986.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47456029 47459197 + MGP_BALBcJ_P0047986 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0047987.1 MGP_BALBcJ_G0023809.1 mouse_genomes_project 17 47456472 47460564 + MGP_BALBcJ_P0047987 Ccnd3 protein_coding protein_coding MGP_BALBcJ_T0046801.1 MGP_BALBcJ_G0023482.1 mouse_genomes_project 17 31919949 31938558 - MGP_BALBcJ_P0046801 Zfp763 protein_coding protein_coding MGP_BALBcJ_T0046802.1 MGP_BALBcJ_G0023482.1 mouse_genomes_project 17 31922845 31938324 - Zfp763 protein_coding processed_transcript MGP_BALBcJ_T0098543.1 MGP_BALBcJ_G0036597.1 mouse_genomes_project 17 78722353 78722464 - Gm22562 rRNA rRNA MGP_BALBcJ_T0048016.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47604088 47661183 + MGP_BALBcJ_P0048016 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048017.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47604658 47654827 + MGP_BALBcJ_P0048017 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048018.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47604985 47661179 + MGP_BALBcJ_P0048018 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048019.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47605960 47657824 + MGP_BALBcJ_P0048019 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048020.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47621906 47654827 + MGP_BALBcJ_P0048020 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048021.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47626716 47654939 + MGP_BALBcJ_P0048021 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048022.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47630713 47655040 + MGP_BALBcJ_P0048022 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048023.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47638058 47655042 + MGP_BALBcJ_P0048023 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048024.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47638058 47655044 + MGP_BALBcJ_P0048024 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048025.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47651617 47655120 + MGP_BALBcJ_P0048025 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048026.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47654462 47661179 + MGP_BALBcJ_P0048026 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048027.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47654897 47661180 + MGP_BALBcJ_P0048027 Tfeb protein_coding protein_coding MGP_BALBcJ_T0048028.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47656311 47658470 + Tfeb protein_coding processed_transcript MGP_BALBcJ_T0048029.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47656653 47657692 + Tfeb protein_coding retained_intron MGP_BALBcJ_T0048030.1 MGP_BALBcJ_G0023819.1 mouse_genomes_project 17 47658194 47660377 + Tfeb protein_coding retained_intron MGP_BALBcJ_T0006926.1 MGP_BALBcJ_G0005700.1 mouse_genomes_project 17 35592408 35596901 + Gm20546 lincRNA lincRNA MGP_BALBcJ_T0102341.1 MGP_BALBcJ_G0040157.1 mouse_genomes_project 17 35958619 35958766 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046214.1 MGP_BALBcJ_G0023344.1 mouse_genomes_project 17 24479044 24481720 - MGP_BALBcJ_P0046214 Wfikkn1 protein_coding protein_coding MGP_BALBcJ_T0046215.1 MGP_BALBcJ_G0023344.1 mouse_genomes_project 17 24480218 24481651 - MGP_BALBcJ_P0046215 Wfikkn1 protein_coding protein_coding MGP_BALBcJ_T0047943.1 MGP_BALBcJ_G0023795.1 mouse_genomes_project 17 46607775 46608548 + MGP_BALBcJ_P0047943 2310039H08Rik protein_coding protein_coding MGP_BALBcJ_T0048439.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71101491 71110304 - MGP_BALBcJ_P0048439 Myl12a protein_coding protein_coding MGP_BALBcJ_T0048440.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71102131 71109915 - Myl12a protein_coding retained_intron MGP_BALBcJ_T0048441.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71102131 71105770 - MGP_BALBcJ_P0048441 Myl12a protein_coding protein_coding MGP_BALBcJ_T0048442.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71102386 71110628 - MGP_BALBcJ_P0048442 Myl12a protein_coding protein_coding MGP_BALBcJ_T0048443.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71103969 71109937 - MGP_BALBcJ_P0048443 Myl12a protein_coding protein_coding MGP_BALBcJ_T0048444.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71104220 71109910 - Myl12a protein_coding retained_intron MGP_BALBcJ_T0048445.1 MGP_BALBcJ_G0023962.1 mouse_genomes_project 17 71104541 71109767 - MGP_BALBcJ_P0048445 Myl12a protein_coding protein_coding MGP_BALBcJ_T0047579.1 MGP_BALBcJ_G0023654.1 mouse_genomes_project 17 36376301 36380557 - MGP_BALBcJ_P0047579 Znrd1 protein_coding protein_coding MGP_BALBcJ_T0047580.1 MGP_BALBcJ_G0023654.1 mouse_genomes_project 17 36376303 36380608 - MGP_BALBcJ_P0047580 Znrd1 protein_coding protein_coding MGP_BALBcJ_T0047581.1 MGP_BALBcJ_G0023654.1 mouse_genomes_project 17 36376356 36380393 - MGP_BALBcJ_P0047581 Znrd1 protein_coding protein_coding MGP_BALBcJ_T0047582.1 MGP_BALBcJ_G0023654.1 mouse_genomes_project 17 36376388 36380634 - Znrd1 protein_coding processed_transcript MGP_BALBcJ_T0047897.1 MGP_BALBcJ_G0023777.1 mouse_genomes_project 17 46249897 46257256 - MGP_BALBcJ_P0047897 Slc22a7 protein_coding protein_coding MGP_BALBcJ_T0045504.1 MGP_BALBcJ_G0023121.1 mouse_genomes_project 17 10192351 10196920 - MGP_BALBcJ_P0045504 Mrpl18 protein_coding protein_coding MGP_BALBcJ_T0045505.1 MGP_BALBcJ_G0023121.1 mouse_genomes_project 17 10194848 10196199 - Mrpl18 protein_coding processed_transcript MGP_BALBcJ_T0045506.1 MGP_BALBcJ_G0023121.1 mouse_genomes_project 17 10194953 10196678 - Mrpl18 protein_coding retained_intron MGP_BALBcJ_T0045507.1 MGP_BALBcJ_G0023121.1 mouse_genomes_project 17 10194997 10196777 - Mrpl18 protein_coding processed_transcript MGP_BALBcJ_T0045508.1 MGP_BALBcJ_G0023121.1 mouse_genomes_project 17 10196076 10196644 - Mrpl18 protein_coding retained_intron MGP_BALBcJ_T0047299.1 MGP_BALBcJ_G0023588.1 mouse_genomes_project 17 34241265 34244312 - MGP_BALBcJ_P0047299 Apom protein_coding protein_coding MGP_BALBcJ_T0013194.1 MGP_BALBcJ_G0011291.1 mouse_genomes_project 17 21102977 21103395 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047971.1 MGP_BALBcJ_G0023807.1 mouse_genomes_project 17 47294567 47328057 + MGP_BALBcJ_P0047971 protein_coding protein_coding MGP_BALBcJ_T0047972.1 MGP_BALBcJ_G0023807.1 mouse_genomes_project 17 47294757 47328551 + MGP_BALBcJ_P0047972 protein_coding protein_coding MGP_BALBcJ_T0003687.1 MGP_BALBcJ_G0003331.1 mouse_genomes_project 17 4004488 4010328 + antisense antisense MGP_BALBcJ_T0047677.1 MGP_BALBcJ_G0023708.1 mouse_genomes_project 17 38159447 38167392 + MGP_BALBcJ_P0047677 Esp31 protein_coding protein_coding MGP_BALBcJ_T0013231.1 MGP_BALBcJ_G0011328.1 mouse_genomes_project 17 37341542 37342479 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045938.1 MGP_BALBcJ_G0023279.1 mouse_genomes_project 17 23243796 23246210 - MGP_BALBcJ_P0045938 Gfer protein_coding protein_coding MGP_BALBcJ_T0046603.1 MGP_BALBcJ_G0023431.1 mouse_genomes_project 17 28355185 28412668 + MGP_BALBcJ_P0046603 Tbc1d22b protein_coding protein_coding MGP_BALBcJ_T0046604.1 MGP_BALBcJ_G0023431.1 mouse_genomes_project 17 28378176 28412667 + Tbc1d22b protein_coding retained_intron MGP_BALBcJ_T0047633.1 MGP_BALBcJ_G0023673.1 mouse_genomes_project 17 36773580 36776325 - MGP_BALBcJ_P0047633 Olfr102 protein_coding protein_coding MGP_BALBcJ_T0046320.1 MGP_BALBcJ_G0023369.1 mouse_genomes_project 17 25364455 25424788 + MGP_BALBcJ_P0046320 Crebrf protein_coding protein_coding MGP_BALBcJ_T0046321.1 MGP_BALBcJ_G0023369.1 mouse_genomes_project 17 25364460 25391792 + MGP_BALBcJ_P0046321 Crebrf protein_coding protein_coding MGP_BALBcJ_T0046322.1 MGP_BALBcJ_G0023369.1 mouse_genomes_project 17 25364515 25412934 + MGP_BALBcJ_P0046322 Crebrf protein_coding protein_coding MGP_BALBcJ_T0046323.1 MGP_BALBcJ_G0023369.1 mouse_genomes_project 17 25364529 25410973 + MGP_BALBcJ_P0046323 Crebrf protein_coding protein_coding MGP_BALBcJ_T0046324.1 MGP_BALBcJ_G0023369.1 mouse_genomes_project 17 25391816 25406862 + Crebrf protein_coding retained_intron MGP_BALBcJ_T0046325.1 MGP_BALBcJ_G0023369.1 mouse_genomes_project 17 25406376 25408594 + Crebrf protein_coding retained_intron MGP_BALBcJ_T0006873.1 MGP_BALBcJ_G0005656.1 mouse_genomes_project 17 6442041 6463877 - 6530411M01Rik lincRNA lincRNA MGP_BALBcJ_T0048559.1 MGP_BALBcJ_G0024002.1 mouse_genomes_project 17 79052158 79088178 - MGP_BALBcJ_P0048559 Eif2ak2 protein_coding protein_coding MGP_BALBcJ_T0048560.1 MGP_BALBcJ_G0024002.1 mouse_genomes_project 17 79054935 79058567 - Eif2ak2 protein_coding processed_transcript MGP_BALBcJ_T0048561.1 MGP_BALBcJ_G0024002.1 mouse_genomes_project 17 79073721 79088153 - Eif2ak2 protein_coding processed_transcript MGP_BALBcJ_T0048562.1 MGP_BALBcJ_G0024002.1 mouse_genomes_project 17 79078080 79088159 - Eif2ak2 protein_coding processed_transcript MGP_BALBcJ_T0048694.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87592345 87693803 + MGP_BALBcJ_P0048694 Ttc7 protein_coding protein_coding MGP_BALBcJ_T0048695.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87592352 87602393 + Ttc7 protein_coding processed_transcript MGP_BALBcJ_T0048696.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87592364 87683505 + MGP_BALBcJ_P0048696 Ttc7 protein_coding protein_coding MGP_BALBcJ_T0048697.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87592410 87672908 + MGP_BALBcJ_P0048697 Ttc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048698.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87592683 87693798 + MGP_BALBcJ_P0048698 Ttc7 protein_coding unknown_likely_coding MGP_BALBcJ_T0048699.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87602274 87692120 + MGP_BALBcJ_P0048699 Ttc7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048700.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87619197 87641097 + Ttc7 protein_coding processed_transcript MGP_BALBcJ_T0048701.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87634253 87645289 + Ttc7 protein_coding retained_intron MGP_BALBcJ_T0048702.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87641233 87650965 + Ttc7 protein_coding processed_transcript MGP_BALBcJ_T0048703.1 MGP_BALBcJ_G0024061.1 mouse_genomes_project 17 87690886 87693803 + Ttc7 protein_coding processed_transcript MGP_BALBcJ_T0013220.1 MGP_BALBcJ_G0011317.1 mouse_genomes_project 17 35532738 35533296 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048064.1 MGP_BALBcJ_G0023831.1 mouse_genomes_project 17 48248711 48254584 + MGP_BALBcJ_P0048064 Trem2 protein_coding protein_coding MGP_BALBcJ_T0048065.1 MGP_BALBcJ_G0023831.1 mouse_genomes_project 17 48248750 48256458 + Trem2 protein_coding retained_intron MGP_BALBcJ_T0048066.1 MGP_BALBcJ_G0023831.1 mouse_genomes_project 17 48248798 48254584 + MGP_BALBcJ_P0048066 Trem2 protein_coding protein_coding MGP_BALBcJ_T0048067.1 MGP_BALBcJ_G0023831.1 mouse_genomes_project 17 48248799 48252869 + Trem2 protein_coding processed_transcript MGP_BALBcJ_T0048280.1 MGP_BALBcJ_G0023910.1 mouse_genomes_project 17 57007159 57023829 - MGP_BALBcJ_P0048280 Slc25a23 protein_coding protein_coding MGP_BALBcJ_T0048281.1 MGP_BALBcJ_G0023910.1 mouse_genomes_project 17 57008647 57016380 - MGP_BALBcJ_P0048281 Slc25a23 protein_coding protein_coding MGP_BALBcJ_T0048282.1 MGP_BALBcJ_G0023910.1 mouse_genomes_project 17 57008933 57017385 - MGP_BALBcJ_P0048282 Slc25a23 protein_coding protein_coding MGP_BALBcJ_T0048283.1 MGP_BALBcJ_G0023910.1 mouse_genomes_project 17 57010495 57017138 - MGP_BALBcJ_P0048283 Slc25a23 protein_coding protein_coding MGP_BALBcJ_T0048284.1 MGP_BALBcJ_G0023910.1 mouse_genomes_project 17 57010639 57018941 - MGP_BALBcJ_P0048284 Slc25a23 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048285.1 MGP_BALBcJ_G0023910.1 mouse_genomes_project 17 57019791 57023785 - Slc25a23 protein_coding retained_intron MGP_BALBcJ_T0046326.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25429234 25434077 + Bnip1 protein_coding retained_intron MGP_BALBcJ_T0046327.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25429243 25434078 + Bnip1 protein_coding retained_intron MGP_BALBcJ_T0046328.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25429245 25440474 + MGP_BALBcJ_P0046328 Bnip1 protein_coding protein_coding MGP_BALBcJ_T0046329.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25429245 25440126 + MGP_BALBcJ_P0046329 Bnip1 protein_coding protein_coding MGP_BALBcJ_T0046330.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25429273 25440465 + MGP_BALBcJ_P0046330 Bnip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046331.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25429287 25440022 + MGP_BALBcJ_P0046331 Bnip1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046332.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25434328 25437953 + Bnip1 protein_coding retained_intron MGP_BALBcJ_T0046333.1 MGP_BALBcJ_G0023370.1 mouse_genomes_project 17 25438719 25440510 + Bnip1 protein_coding retained_intron MGP_BALBcJ_T0017552.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85852332 85866914 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017553.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85853614 85869938 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017554.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85858957 85869931 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017555.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85859524 85869964 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017556.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85861147 85869906 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017557.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85862088 85869841 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017558.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85862833 85869951 - Six3os1 processed_transcript retained_intron MGP_BALBcJ_T0017559.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85863215 85869787 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017560.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85863215 85869789 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017561.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85864468 85869841 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017562.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85864796 85867812 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017563.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85865276 85869639 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0017564.1 MGP_BALBcJ_G0015294.1 mouse_genomes_project 17 85865277 85869924 - Six3os1 processed_transcript antisense MGP_BALBcJ_T0100831.1 MGP_BALBcJ_G0038867.1 mouse_genomes_project 17 23881288 23881425 + Gm25921 snoRNA snoRNA MGP_BALBcJ_T0102308.1 MGP_BALBcJ_G0040124.1 mouse_genomes_project 17 31848694 31855598 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006945.1 MGP_BALBcJ_G0005712.1 mouse_genomes_project 17 55860228 55864841 - Gm16712 lincRNA lincRNA MGP_BALBcJ_T0048161.1 MGP_BALBcJ_G0023862.1 mouse_genomes_project 17 55843229 55854660 - MGP_BALBcJ_P0048161 protein_coding protein_coding MGP_BALBcJ_T0045654.1 MGP_BALBcJ_G0023172.1 mouse_genomes_project 17 18341166 18364015 - MGP_BALBcJ_P0045654 protein_coding protein_coding MGP_BALBcJ_T0045985.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23451160 23457717 - MGP_BALBcJ_P0045985 Eme2 protein_coding protein_coding MGP_BALBcJ_T0045986.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23454812 23457749 - MGP_BALBcJ_P0045986 Eme2 protein_coding protein_coding MGP_BALBcJ_T0045988.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23454815 23457721 - MGP_BALBcJ_P0045988 Eme2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045989.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23455140 23457740 - Eme2 protein_coding retained_intron MGP_BALBcJ_T0045990.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23455440 23456846 - Eme2 protein_coding retained_intron MGP_BALBcJ_T0045991.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23455799 23457717 - Eme2 protein_coding retained_intron MGP_BALBcJ_T0045992.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23456022 23457724 - Eme2 protein_coding retained_intron MGP_BALBcJ_T0045993.1 MGP_BALBcJ_G0023294.1 mouse_genomes_project 17 23456407 23457687 - Eme2 protein_coding retained_intron MGP_BALBcJ_T0047759.1 MGP_BALBcJ_G0023749.1 mouse_genomes_project 17 45238438 45265247 - MGP_BALBcJ_P0047759 Spats1 protein_coding protein_coding MGP_BALBcJ_T0047375.1 MGP_BALBcJ_G0023607.1 mouse_genomes_project 17 34829405 34836615 - protein_coding processed_transcript MGP_BALBcJ_T0003720.1 MGP_BALBcJ_G0003352.1 mouse_genomes_project 17 28384901 28402062 - Tbc1d22bos antisense antisense MGP_BALBcJ_T0003721.1 MGP_BALBcJ_G0003352.1 mouse_genomes_project 17 28393599 28402036 - Tbc1d22bos antisense antisense MGP_BALBcJ_T0099558.1 MGP_BALBcJ_G0037594.1 mouse_genomes_project 17 13393478 13393585 - Gm25598 snRNA snRNA MGP_BALBcJ_T0048308.1 MGP_BALBcJ_G0023922.1 mouse_genomes_project 17 57337278 57447764 + MGP_BALBcJ_P0048308 Adgre1 protein_coding protein_coding MGP_BALBcJ_T0048309.1 MGP_BALBcJ_G0023922.1 mouse_genomes_project 17 57337306 57447758 + MGP_BALBcJ_P0048309 Adgre1 protein_coding protein_coding MGP_BALBcJ_T0047966.1 MGP_BALBcJ_G0023805.1 mouse_genomes_project 17 47249646 47255596 - MGP_BALBcJ_P0047966 Guca1a protein_coding protein_coding MGP_BALBcJ_T0046310.1 MGP_BALBcJ_G0023366.1 mouse_genomes_project 17 25183257 25184070 + MGP_BALBcJ_P0046310 Gm8225 protein_coding protein_coding MGP_BALBcJ_T0098545.1 MGP_BALBcJ_G0036599.1 mouse_genomes_project 17 84182549 84182658 + Gm23905 rRNA rRNA MGP_BALBcJ_T0048624.1 MGP_BALBcJ_G0024032.1 mouse_genomes_project 17 83564768 83698749 + MGP_BALBcJ_P0048624 Eml4 protein_coding protein_coding MGP_BALBcJ_T0048625.1 MGP_BALBcJ_G0024032.1 mouse_genomes_project 17 83564768 83698749 + MGP_BALBcJ_P0048625 Eml4 protein_coding protein_coding MGP_BALBcJ_T0048626.1 MGP_BALBcJ_G0024032.1 mouse_genomes_project 17 83564768 83698749 + MGP_BALBcJ_P0048626 Eml4 protein_coding protein_coding MGP_BALBcJ_T0102363.1 MGP_BALBcJ_G0040179.1 mouse_genomes_project 17 53721632 53722252 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047511.1 MGP_BALBcJ_G0023627.1 mouse_genomes_project 17 35273520 35378553 - H2-T23 protein_coding retained_intron MGP_BALBcJ_T0047512.1 MGP_BALBcJ_G0023627.1 mouse_genomes_project 17 35274096 35378700 - H2-T23 protein_coding retained_intron MGP_BALBcJ_T0047513.1 MGP_BALBcJ_G0023627.1 mouse_genomes_project 17 35274096 35378865 - MGP_BALBcJ_P0047513 H2-T23 protein_coding protein_coding MGP_BALBcJ_T0047514.1 MGP_BALBcJ_G0023627.1 mouse_genomes_project 17 35278166 35378740 - H2-T23 protein_coding retained_intron MGP_BALBcJ_T0017524.1 MGP_BALBcJ_G0015285.1 mouse_genomes_project 17 32682676 32684572 + Gm17251 processed_transcript processed_transcript MGP_BALBcJ_T0045660.1 MGP_BALBcJ_G0023178.1 mouse_genomes_project 17 18728926 18729958 - MGP_BALBcJ_P0045660 Fpr-rs3 protein_coding protein_coding MGP_BALBcJ_T0046266.1 MGP_BALBcJ_G0023357.1 mouse_genomes_project 17 24808484 24811573 - MGP_BALBcJ_P0046266 Pdia2 protein_coding protein_coding MGP_BALBcJ_T0046267.1 MGP_BALBcJ_G0023357.1 mouse_genomes_project 17 24808491 24809402 - MGP_BALBcJ_P0046267 Pdia2 protein_coding protein_coding MGP_BALBcJ_T0046268.1 MGP_BALBcJ_G0023357.1 mouse_genomes_project 17 24808510 24811548 - MGP_BALBcJ_P0046268 Pdia2 protein_coding protein_coding MGP_BALBcJ_T0046270.1 MGP_BALBcJ_G0023357.1 mouse_genomes_project 17 24809979 24811494 - MGP_BALBcJ_P0046270 Pdia2 protein_coding protein_coding MGP_BALBcJ_T0013225.1 MGP_BALBcJ_G0011322.1 mouse_genomes_project 17 35829216 35830176 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045430.1 MGP_BALBcJ_G0023099.1 mouse_genomes_project 17 5585740 5599711 + MGP_BALBcJ_P0045430 Mpc1 protein_coding protein_coding MGP_BALBcJ_T0045431.1 MGP_BALBcJ_G0023099.1 mouse_genomes_project 17 5586629 5596453 + Mpc1 protein_coding retained_intron MGP_BALBcJ_T0045432.1 MGP_BALBcJ_G0023099.1 mouse_genomes_project 17 5586685 5600097 + MGP_BALBcJ_P0045432 Mpc1 protein_coding protein_coding MGP_BALBcJ_T0045433.1 MGP_BALBcJ_G0023099.1 mouse_genomes_project 17 5587287 5600241 + MGP_BALBcJ_P0045433 Mpc1 protein_coding protein_coding MGP_BALBcJ_T0045434.1 MGP_BALBcJ_G0023099.1 mouse_genomes_project 17 5598933 5599976 + Mpc1 protein_coding retained_intron MGP_BALBcJ_T0045435.1 MGP_BALBcJ_G0023099.1 mouse_genomes_project 17 5599195 5600241 + MGP_BALBcJ_P0045435 Mpc1 protein_coding protein_coding MGP_BALBcJ_T0047475.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35140082 35147303 - MGP_BALBcJ_P0047475 Mrps18b protein_coding protein_coding MGP_BALBcJ_T0047476.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35140082 35147303 - MGP_BALBcJ_P0047476 Mrps18b protein_coding protein_coding MGP_BALBcJ_T0047477.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35140089 35147244 - MGP_BALBcJ_P0047477 Mrps18b protein_coding protein_coding MGP_BALBcJ_T0047478.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35141426 35143490 - Mrps18b protein_coding retained_intron MGP_BALBcJ_T0047479.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35141774 35147251 - MGP_BALBcJ_P0047479 Mrps18b protein_coding protein_coding MGP_BALBcJ_T0047480.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35142364 35147237 - MGP_BALBcJ_P0047480 Mrps18b protein_coding protein_coding MGP_BALBcJ_T0047481.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35144712 35147291 - Mrps18b protein_coding retained_intron MGP_BALBcJ_T0047482.1 MGP_BALBcJ_G0023621.1 mouse_genomes_project 17 35145478 35147117 - Mrps18b protein_coding processed_transcript MGP_BALBcJ_T0048040.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47743794 47802534 - MGP_BALBcJ_P0048040 Foxp4 protein_coding protein_coding MGP_BALBcJ_T0048041.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47744425 47802324 - MGP_BALBcJ_P0048041 Foxp4 protein_coding protein_coding MGP_BALBcJ_T0048042.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47744425 47802289 - MGP_BALBcJ_P0048042 Foxp4 protein_coding protein_coding MGP_BALBcJ_T0048043.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47744429 47802365 - MGP_BALBcJ_P0048043 Foxp4 protein_coding protein_coding MGP_BALBcJ_T0048044.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47754821 47765112 - Foxp4 protein_coding processed_transcript MGP_BALBcJ_T0048045.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47755016 47755490 - Foxp4 protein_coding retained_intron MGP_BALBcJ_T0048046.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47756875 47764842 - Foxp4 protein_coding retained_intron MGP_BALBcJ_T0048047.1 MGP_BALBcJ_G0023821.1 mouse_genomes_project 17 47764588 47802315 - Foxp4 protein_coding retained_intron MGP_BALBcJ_T0048167.1 MGP_BALBcJ_G0023867.1 mouse_genomes_project 17 55903250 55911941 - MGP_BALBcJ_P0048167 Stap2 protein_coding protein_coding MGP_BALBcJ_T0000986.1 MGP_BALBcJ_G0000914.1 mouse_genomes_project 17 51772773 51776026 + TEC TEC MGP_BALBcJ_T0013273.1 MGP_BALBcJ_G0011370.1 mouse_genomes_project 17 79250229 79251206 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048643.1 MGP_BALBcJ_G0024039.1 mouse_genomes_project 17 84747848 84860671 + MGP_BALBcJ_P0048643 Plekhh2 protein_coding protein_coding MGP_BALBcJ_T0003774.1 MGP_BALBcJ_G0003393.1 mouse_genomes_project 17 87640783 87643072 - Gm15978 antisense antisense MGP_BALBcJ_T0048177.1 MGP_BALBcJ_G0023869.1 mouse_genomes_project 17 55923540 55945111 - MGP_BALBcJ_P0048177 Sh3gl1 protein_coding protein_coding MGP_BALBcJ_T0046910.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32885161 32886115 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046911.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32885200 32893292 + MGP_BALBcJ_P0046911 Rgl2 protein_coding protein_coding MGP_BALBcJ_T0046912.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32885522 32887837 + Rgl2 protein_coding processed_transcript MGP_BALBcJ_T0046913.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32885592 32888002 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046914.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32886508 32887660 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046915.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32886517 32888144 + Rgl2 protein_coding processed_transcript MGP_BALBcJ_T0046916.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32886533 32887577 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046917.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32886840 32888134 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046918.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32887682 32888855 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046919.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32887761 32888778 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0046920.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32889562 32892829 + MGP_BALBcJ_P0046920 Rgl2 protein_coding protein_coding MGP_BALBcJ_T0046921.1 MGP_BALBcJ_G0023508.1 mouse_genomes_project 17 32890982 32892495 + Rgl2 protein_coding retained_intron MGP_BALBcJ_T0047830.1 MGP_BALBcJ_G0023764.1 mouse_genomes_project 17 45918897 45933895 - MGP_BALBcJ_P0047830 Rsph9 protein_coding protein_coding MGP_BALBcJ_T0047834.1 MGP_BALBcJ_G0023764.1 mouse_genomes_project 17 45926133 45941281 - MGP_BALBcJ_P0047834 Rsph9 protein_coding protein_coding MGP_BALBcJ_T0047835.1 MGP_BALBcJ_G0023764.1 mouse_genomes_project 17 45931568 45933860 - Rsph9 protein_coding retained_intron MGP_BALBcJ_T0100836.1 MGP_BALBcJ_G0038872.1 mouse_genomes_project 17 34358321 34358398 + Gm22589 snoRNA snoRNA MGP_BALBcJ_T0045649.1 MGP_BALBcJ_G0023167.1 mouse_genomes_project 17 17812333 17849791 + MGP_BALBcJ_P0045649 Vmn2r103 protein_coding protein_coding MGP_BALBcJ_T0003704.1 MGP_BALBcJ_G0003338.1 mouse_genomes_project 17 11108264 11109227 - Gm16049 antisense antisense MGP_BALBcJ_T0048550.1 MGP_BALBcJ_G0023995.1 mouse_genomes_project 17 78387487 78564566 + MGP_BALBcJ_P0048550 Crim1 protein_coding protein_coding MGP_BALBcJ_T0047316.1 MGP_BALBcJ_G0023590.1 mouse_genomes_project 17 34261488 34277211 - MGP_BALBcJ_P0047316 Prrc2a protein_coding protein_coding MGP_BALBcJ_T0047317.1 MGP_BALBcJ_G0023590.1 mouse_genomes_project 17 34261501 34275283 - MGP_BALBcJ_P0047317 Prrc2a protein_coding protein_coding MGP_BALBcJ_T0047318.1 MGP_BALBcJ_G0023590.1 mouse_genomes_project 17 34261590 34262779 - Prrc2a protein_coding retained_intron MGP_BALBcJ_T0047319.1 MGP_BALBcJ_G0023590.1 mouse_genomes_project 17 34262745 34263365 - Prrc2a protein_coding retained_intron MGP_BALBcJ_T0047320.1 MGP_BALBcJ_G0023590.1 mouse_genomes_project 17 34264513 34265575 - Prrc2a protein_coding retained_intron MGP_BALBcJ_T0047321.1 MGP_BALBcJ_G0023590.1 mouse_genomes_project 17 34269446 34277149 - Prrc2a protein_coding processed_transcript MGP_BALBcJ_T0047257.1 MGP_BALBcJ_G0023576.1 mouse_genomes_project 17 34169209 34172187 + MGP_BALBcJ_P0047257 Ddah2 protein_coding protein_coding MGP_BALBcJ_T0047258.1 MGP_BALBcJ_G0023576.1 mouse_genomes_project 17 34169907 34170998 + MGP_BALBcJ_P0047258 Ddah2 protein_coding protein_coding MGP_BALBcJ_T0047259.1 MGP_BALBcJ_G0023576.1 mouse_genomes_project 17 34170984 34171717 + Ddah2 protein_coding retained_intron MGP_BALBcJ_T0099560.1 MGP_BALBcJ_G0037596.1 mouse_genomes_project 17 27781114 27781286 - Gm23887 snRNA snRNA MGP_BALBcJ_T0046967.1 MGP_BALBcJ_G0023519.1 mouse_genomes_project 17 32993194 32996619 - MGP_BALBcJ_P0046967 Slc39a7 protein_coding protein_coding MGP_BALBcJ_T0046968.1 MGP_BALBcJ_G0023519.1 mouse_genomes_project 17 32993196 32996473 - MGP_BALBcJ_P0046968 Slc39a7 protein_coding protein_coding MGP_BALBcJ_T0046969.1 MGP_BALBcJ_G0023519.1 mouse_genomes_project 17 32993200 32996577 - Slc39a7 protein_coding retained_intron MGP_BALBcJ_T0046970.1 MGP_BALBcJ_G0023519.1 mouse_genomes_project 17 32994773 32995957 - Slc39a7 protein_coding retained_intron MGP_BALBcJ_T0046971.1 MGP_BALBcJ_G0023519.1 mouse_genomes_project 17 32995101 32996585 - MGP_BALBcJ_P0046971 Slc39a7 protein_coding protein_coding MGP_BALBcJ_T0046972.1 MGP_BALBcJ_G0023519.1 mouse_genomes_project 17 32995521 32996611 - Slc39a7 protein_coding processed_transcript MGP_BALBcJ_T0045750.1 MGP_BALBcJ_G0023225.1 mouse_genomes_project 17 22140746 22148644 + MGP_BALBcJ_P0045750 Ccdc64b protein_coding protein_coding MGP_BALBcJ_T0046983.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33004527 33031754 + MGP_BALBcJ_P0046983 Col11a2 protein_coding protein_coding MGP_BALBcJ_T0046984.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33004527 33031311 + MGP_BALBcJ_P0046984 Col11a2 protein_coding protein_coding MGP_BALBcJ_T0046985.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33004527 33031311 + MGP_BALBcJ_P0046985 Col11a2 protein_coding protein_coding MGP_BALBcJ_T0046986.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33004527 33017567 + MGP_BALBcJ_P0046986 Col11a2 protein_coding protein_coding MGP_BALBcJ_T0046987.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33013413 33025023 + MGP_BALBcJ_P0046987 Col11a2 protein_coding protein_coding MGP_BALBcJ_T0046988.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33017356 33019383 + Col11a2 protein_coding processed_transcript MGP_BALBcJ_T0046989.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33020134 33021506 + Col11a2 protein_coding retained_intron MGP_BALBcJ_T0046990.1 MGP_BALBcJ_G0023521.1 mouse_genomes_project 17 33027487 33029862 + Col11a2 protein_coding retained_intron MGP_BALBcJ_T0003755.1 MGP_BALBcJ_G0003378.1 mouse_genomes_project 17 45452974 45455699 + Gm16172 antisense antisense MGP_BALBcJ_T0046116.1 MGP_BALBcJ_G0023320.1 mouse_genomes_project 17 24058949 24063952 + MGP_BALBcJ_P0046116 Tekt4 protein_coding protein_coding MGP_BALBcJ_T0045765.1 MGP_BALBcJ_G0023230.1 mouse_genomes_project 17 22162649 22164084 - MGP_BALBcJ_P0045765 Cldn9 protein_coding protein_coding MGP_BALBcJ_T0102334.1 MGP_BALBcJ_G0040150.1 mouse_genomes_project 17 35547979 35548085 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045819.1 MGP_BALBcJ_G0023249.1 mouse_genomes_project 17 22523247 22527814 - MGP_BALBcJ_P0045819 Prss22 protein_coding protein_coding MGP_BALBcJ_T0048217.1 MGP_BALBcJ_G0023885.1 mouse_genomes_project 17 56336159 56385664 - MGP_BALBcJ_P0048217 Ptprs protein_coding protein_coding MGP_BALBcJ_T0048218.1 MGP_BALBcJ_G0023885.1 mouse_genomes_project 17 56336161 56400335 - MGP_BALBcJ_P0048218 Ptprs protein_coding protein_coding MGP_BALBcJ_T0048219.1 MGP_BALBcJ_G0023885.1 mouse_genomes_project 17 56345965 56400221 - Ptprs protein_coding processed_transcript MGP_BALBcJ_T0048220.1 MGP_BALBcJ_G0023885.1 mouse_genomes_project 17 56348795 56353148 - MGP_BALBcJ_P0048220 Ptprs protein_coding unknown_likely_coding MGP_BALBcJ_T0048221.1 MGP_BALBcJ_G0023885.1 mouse_genomes_project 17 56348795 56353940 - MGP_BALBcJ_P0048221 Ptprs protein_coding unknown_likely_coding MGP_BALBcJ_T0013244.1 MGP_BALBcJ_G0011341.1 mouse_genomes_project 17 47815317 47815674 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047667.1 MGP_BALBcJ_G0023701.1 mouse_genomes_project 17 37632932 37633874 - MGP_BALBcJ_P0047667 Olfr132 protein_coding protein_coding MGP_BALBcJ_T0048572.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79157170 79228343 - MGP_BALBcJ_P0048572 Prkd3 protein_coding protein_coding MGP_BALBcJ_T0048573.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79157170 79220704 - MGP_BALBcJ_P0048573 Prkd3 protein_coding protein_coding MGP_BALBcJ_T0048574.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79158307 79228343 - MGP_BALBcJ_P0048574 Prkd3 protein_coding protein_coding MGP_BALBcJ_T0048575.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79159396 79216279 - MGP_BALBcJ_P0048575 Prkd3 protein_coding protein_coding MGP_BALBcJ_T0048576.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79177359 79193128 - Prkd3 protein_coding retained_intron MGP_BALBcJ_T0048577.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79179542 79228254 - MGP_BALBcJ_P0048577 Prkd3 protein_coding protein_coding MGP_BALBcJ_T0048578.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79180011 79216462 - Prkd3 protein_coding processed_transcript MGP_BALBcJ_T0048579.1 MGP_BALBcJ_G0024007.1 mouse_genomes_project 17 79217518 79228304 - Prkd3 protein_coding retained_intron MGP_BALBcJ_T0045706.1 MGP_BALBcJ_G0023206.1 mouse_genomes_project 17 20208334 20209126 - MGP_BALBcJ_P0045706 Gm9772 protein_coding protein_coding MGP_BALBcJ_T0048661.1 MGP_BALBcJ_G0024045.1 mouse_genomes_project 17 85273880 85310637 + MGP_BALBcJ_P0048661 Slc3a1 protein_coding protein_coding MGP_BALBcJ_T0102338.1 MGP_BALBcJ_G0040154.1 mouse_genomes_project 17 35900518 35900739 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045655.1 MGP_BALBcJ_G0023173.1 mouse_genomes_project 17 18429709 18463493 + MGP_BALBcJ_P0045655 Vmn2r107 protein_coding protein_coding MGP_BALBcJ_T0046608.1 MGP_BALBcJ_G0023433.1 mouse_genomes_project 17 28420653 28509978 + MGP_BALBcJ_P0046608 Gm28043 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046354.1 MGP_BALBcJ_G0023377.1 mouse_genomes_project 17 25703865 25713375 - MGP_BALBcJ_P0046354 Bak1 protein_coding protein_coding MGP_BALBcJ_T0046355.1 MGP_BALBcJ_G0023377.1 mouse_genomes_project 17 25703867 25712944 - MGP_BALBcJ_P0046355 Bak1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046356.1 MGP_BALBcJ_G0023377.1 mouse_genomes_project 17 25704721 25707180 - MGP_BALBcJ_P0046356 Bak1 protein_coding protein_coding MGP_BALBcJ_T0046357.1 MGP_BALBcJ_G0023377.1 mouse_genomes_project 17 25706969 25712953 - Bak1 protein_coding processed_transcript MGP_BALBcJ_T0046727.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31057984 31092058 - MGP_BALBcJ_P0046727 Brd4 protein_coding unknown_likely_coding MGP_BALBcJ_T0046728.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31059230 31147440 - MGP_BALBcJ_P0046728 Brd4 protein_coding protein_coding MGP_BALBcJ_T0046729.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31059230 31147433 - MGP_BALBcJ_P0046729 Brd4 protein_coding protein_coding MGP_BALBcJ_T0046730.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31059232 31147433 - MGP_BALBcJ_P0046730 Brd4 protein_coding protein_coding MGP_BALBcJ_T0046731.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31067866 31147440 - MGP_BALBcJ_P0046731 Brd4 protein_coding protein_coding MGP_BALBcJ_T0046732.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31069622 31147459 - MGP_BALBcJ_P0046732 Brd4 protein_coding protein_coding MGP_BALBcJ_T0046733.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31076127 31148058 - MGP_BALBcJ_P0046733 Brd4 protein_coding protein_coding MGP_BALBcJ_T0046734.1 MGP_BALBcJ_G0023462.1 mouse_genomes_project 17 31076162 31148013 - MGP_BALBcJ_P0046734 Brd4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048195.1 MGP_BALBcJ_G0023877.1 mouse_genomes_project 17 56076381 56088023 + MGP_BALBcJ_P0048195 Tnfaip8l1 protein_coding protein_coding MGP_BALBcJ_T0100844.1 MGP_BALBcJ_G0038880.1 mouse_genomes_project 17 64989784 64989916 - Gm25344 snoRNA snoRNA MGP_BALBcJ_T0048159.1 MGP_BALBcJ_G0023860.1 mouse_genomes_project 17 55648375 55753003 + MGP_BALBcJ_P0048159 Adgre4 protein_coding protein_coding MGP_BALBcJ_T0047761.1 MGP_BALBcJ_G0023751.1 mouse_genomes_project 17 45314760 45334373 + MGP_BALBcJ_P0047761 Tcte1 protein_coding protein_coding MGP_BALBcJ_T0003753.1 MGP_BALBcJ_G0003376.1 mouse_genomes_project 17 44521829 44523578 + Runx2os1 antisense antisense MGP_BALBcJ_T0045558.1 MGP_BALBcJ_G0023133.1 mouse_genomes_project 17 12134757 12163513 - MGP_BALBcJ_P0045558 Thbs2 protein_coding protein_coding MGP_BALBcJ_T0045357.1 MGP_BALBcJ_G0023071.1 mouse_genomes_project 17 318772 514465 + MGP_BALBcJ_P0045357 Tiam2 protein_coding protein_coding MGP_BALBcJ_T0045358.1 MGP_BALBcJ_G0023071.1 mouse_genomes_project 17 391426 514465 + MGP_BALBcJ_P0045358 Tiam2 protein_coding protein_coding MGP_BALBcJ_T0047283.1 MGP_BALBcJ_G0023584.1 mouse_genomes_project 17 34226276 34227758 - MGP_BALBcJ_P0047283 Ly6g5b protein_coding protein_coding MGP_BALBcJ_T0047284.1 MGP_BALBcJ_G0023584.1 mouse_genomes_project 17 34226310 34227758 - MGP_BALBcJ_P0047284 Ly6g5b protein_coding protein_coding MGP_BALBcJ_T0047701.1 MGP_BALBcJ_G0023728.1 mouse_genomes_project 17 42073593 42278006 + MGP_BALBcJ_P0047701 Ptchd4 protein_coding protein_coding MGP_BALBcJ_T0046404.1 MGP_BALBcJ_G0023389.1 mouse_genomes_project 17 26450595 26465163 - MGP_BALBcJ_P0046404 Spdef protein_coding protein_coding MGP_BALBcJ_T0046405.1 MGP_BALBcJ_G0023389.1 mouse_genomes_project 17 26450690 26465164 - MGP_BALBcJ_P0046405 Spdef protein_coding protein_coding MGP_BALBcJ_T0046406.1 MGP_BALBcJ_G0023389.1 mouse_genomes_project 17 26450692 26465102 - MGP_BALBcJ_P0046406 Spdef protein_coding protein_coding MGP_BALBcJ_T0046407.1 MGP_BALBcJ_G0023389.1 mouse_genomes_project 17 26450748 26453815 - Spdef protein_coding processed_transcript MGP_BALBcJ_T0046408.1 MGP_BALBcJ_G0023389.1 mouse_genomes_project 17 26456224 26465137 - MGP_BALBcJ_P0046408 Spdef protein_coding protein_coding MGP_BALBcJ_T0013274.1 MGP_BALBcJ_G0011371.1 mouse_genomes_project 17 82026117 82026496 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013182.1 MGP_BALBcJ_G0011279.1 mouse_genomes_project 17 8183308 8183528 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048204.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56224132 56244277 + MGP_BALBcJ_P0048204 Uhrf1 protein_coding protein_coding MGP_BALBcJ_T0048205.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56224211 56244277 + MGP_BALBcJ_P0048205 Uhrf1 protein_coding protein_coding MGP_BALBcJ_T0048206.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56225124 56244277 + MGP_BALBcJ_P0048206 Uhrf1 protein_coding protein_coding MGP_BALBcJ_T0048207.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56225159 56244277 + MGP_BALBcJ_P0048207 Uhrf1 protein_coding protein_coding MGP_BALBcJ_T0048208.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56225218 56231531 + MGP_BALBcJ_P0048208 Uhrf1 protein_coding protein_coding MGP_BALBcJ_T0048209.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56233474 56234015 + Uhrf1 protein_coding retained_intron MGP_BALBcJ_T0048210.1 MGP_BALBcJ_G0023883.1 mouse_genomes_project 17 56238864 56243130 + Uhrf1 protein_coding retained_intron MGP_BALBcJ_T0046572.1 MGP_BALBcJ_G0023423.1 mouse_genomes_project 17 28045112 28058816 - MGP_BALBcJ_P0046572 Ppil1 protein_coding protein_coding MGP_BALBcJ_T0046573.1 MGP_BALBcJ_G0023423.1 mouse_genomes_project 17 28045533 28051198 - Ppil1 protein_coding retained_intron MGP_BALBcJ_T0046574.1 MGP_BALBcJ_G0023423.1 mouse_genomes_project 17 28045572 28058572 - MGP_BALBcJ_P0046574 Ppil1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046575.1 MGP_BALBcJ_G0023423.1 mouse_genomes_project 17 28055756 28058598 - Ppil1 protein_coding processed_transcript MGP_BALBcJ_T0047008.1 MGP_BALBcJ_G0023525.1 mouse_genomes_project 17 33125151 33137286 + MGP_BALBcJ_P0047008 protein_coding protein_coding MGP_BALBcJ_T0048499.1 MGP_BALBcJ_G0023979.1 mouse_genomes_project 17 73657002 73875754 - MGP_BALBcJ_P0048499 Galnt14 protein_coding protein_coding MGP_BALBcJ_T0048500.1 MGP_BALBcJ_G0023979.1 mouse_genomes_project 17 73671340 73875718 - MGP_BALBcJ_P0048500 Galnt14 protein_coding protein_coding MGP_BALBcJ_T0048501.1 MGP_BALBcJ_G0023979.1 mouse_genomes_project 17 73737481 73875756 - Galnt14 protein_coding retained_intron MGP_BALBcJ_T0006904.1 MGP_BALBcJ_G0005682.1 mouse_genomes_project 17 27857717 27879002 - Trp53cor1 lincRNA lincRNA MGP_BALBcJ_T0046391.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26368225 26373418 - MGP_BALBcJ_P0046391 Rps10 protein_coding protein_coding MGP_BALBcJ_T0046392.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26368227 26374760 - MGP_BALBcJ_P0046392 Rps10 protein_coding protein_coding MGP_BALBcJ_T0046393.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26368228 26373382 - MGP_BALBcJ_P0046393 Rps10 protein_coding protein_coding MGP_BALBcJ_T0046394.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26368268 26372617 - MGP_BALBcJ_P0046394 Rps10 protein_coding protein_coding MGP_BALBcJ_T0046395.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26368833 26373418 - Rps10 protein_coding processed_transcript MGP_BALBcJ_T0046396.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26369465 26372075 - Rps10 protein_coding retained_intron MGP_BALBcJ_T0046397.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26369761 26373371 - Rps10 protein_coding retained_intron MGP_BALBcJ_T0046398.1 MGP_BALBcJ_G0023387.1 mouse_genomes_project 17 26371964 26373386 - Rps10 protein_coding processed_transcript MGP_BALBcJ_T0099571.1 MGP_BALBcJ_G0037607.1 mouse_genomes_project 17 45415975 45416056 + Gm25008 snRNA snRNA MGP_BALBcJ_T0045777.1 MGP_BALBcJ_G0023236.1 mouse_genomes_project 17 22256479 22265464 - MGP_BALBcJ_P0045777 Flywch2 protein_coding protein_coding MGP_BALBcJ_T0045778.1 MGP_BALBcJ_G0023236.1 mouse_genomes_project 17 22256522 22259357 - MGP_BALBcJ_P0045778 Flywch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045779.1 MGP_BALBcJ_G0023236.1 mouse_genomes_project 17 22256555 22265435 - MGP_BALBcJ_P0045779 Flywch2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047662.1 MGP_BALBcJ_G0023698.1 mouse_genomes_project 17 37557972 37558965 - MGP_BALBcJ_P0047662 Olfr129 protein_coding protein_coding MGP_BALBcJ_T0047663.1 MGP_BALBcJ_G0023698.1 mouse_genomes_project 17 37557972 37563159 - MGP_BALBcJ_P0047663 Olfr129 protein_coding protein_coding MGP_BALBcJ_T0045882.1 MGP_BALBcJ_G0023264.1 mouse_genomes_project 17 22977268 22983780 - Dnase1l2 protein_coding retained_intron MGP_BALBcJ_T0045883.1 MGP_BALBcJ_G0023264.1 mouse_genomes_project 17 22977274 22984684 - MGP_BALBcJ_P0045883 Dnase1l2 protein_coding protein_coding MGP_BALBcJ_T0045884.1 MGP_BALBcJ_G0023264.1 mouse_genomes_project 17 22981991 22984663 - MGP_BALBcJ_P0045884 Dnase1l2 protein_coding protein_coding MGP_BALBcJ_T0045885.1 MGP_BALBcJ_G0023264.1 mouse_genomes_project 17 22982182 22983732 - MGP_BALBcJ_P0045885 Dnase1l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045886.1 MGP_BALBcJ_G0023264.1 mouse_genomes_project 17 22983106 22984280 - MGP_BALBcJ_P0045886 Dnase1l2 protein_coding protein_coding MGP_BALBcJ_T0045887.1 MGP_BALBcJ_G0023264.1 mouse_genomes_project 17 22983304 22984683 - MGP_BALBcJ_P0045887 Dnase1l2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003773.1 MGP_BALBcJ_G0003392.1 mouse_genomes_project 17 86560702 86562720 - 2010106C02Rik antisense antisense MGP_BALBcJ_T0046159.1 MGP_BALBcJ_G0023332.1 mouse_genomes_project 17 24389344 24391545 - MGP_BALBcJ_P0046159 Fam173a protein_coding protein_coding MGP_BALBcJ_T0003768.1 MGP_BALBcJ_G0003387.1 mouse_genomes_project 17 69379817 69381664 - 2410021H03Rik antisense antisense MGP_BALBcJ_T0046412.1 MGP_BALBcJ_G0023391.1 mouse_genomes_project 17 26579768 26591602 + Snrpc protein_coding retained_intron MGP_BALBcJ_T0046413.1 MGP_BALBcJ_G0023391.1 mouse_genomes_project 17 26579796 26591602 + MGP_BALBcJ_P0046413 Snrpc protein_coding protein_coding MGP_BALBcJ_T0017505.1 MGP_BALBcJ_G0015275.1 mouse_genomes_project 17 11024790 11032217 - Gm16046 processed_transcript processed_transcript MGP_BALBcJ_T0017506.1 MGP_BALBcJ_G0015275.1 mouse_genomes_project 17 11028261 11032207 - Gm16046 processed_transcript processed_transcript MGP_BALBcJ_T0017507.1 MGP_BALBcJ_G0015275.1 mouse_genomes_project 17 11028733 11032236 - Gm16046 processed_transcript processed_transcript MGP_BALBcJ_T0047927.1 MGP_BALBcJ_G0023788.1 mouse_genomes_project 17 46507434 46513856 - MGP_BALBcJ_P0047927 Klhdc3 protein_coding protein_coding MGP_BALBcJ_T0047928.1 MGP_BALBcJ_G0023788.1 mouse_genomes_project 17 46507437 46513856 - MGP_BALBcJ_P0047928 Klhdc3 protein_coding protein_coding MGP_BALBcJ_T0047370.1 MGP_BALBcJ_G0023604.1 mouse_genomes_project 17 34756015 34761095 + MGP_BALBcJ_P0047370 Cdsn protein_coding protein_coding MGP_BALBcJ_T0100828.1 MGP_BALBcJ_G0038864.1 mouse_genomes_project 17 23071876 23071954 + Snord60 snoRNA snoRNA MGP_BALBcJ_T0045953.1 MGP_BALBcJ_G0023282.1 mouse_genomes_project 17 23273868 23276085 - MGP_BALBcJ_P0045953 Rnf151 protein_coding protein_coding MGP_BALBcJ_T0047837.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973719 45982064 + MGP_BALBcJ_P0047837 Gtpbp2 protein_coding protein_coding MGP_BALBcJ_T0047838.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973719 45982062 + MGP_BALBcJ_P0047838 Gtpbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047839.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973736 45976199 + Gtpbp2 protein_coding processed_transcript MGP_BALBcJ_T0047840.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973753 45982030 + MGP_BALBcJ_P0047840 Gtpbp2 protein_coding protein_coding MGP_BALBcJ_T0047841.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973798 45977001 + MGP_BALBcJ_P0047841 Gtpbp2 protein_coding protein_coding MGP_BALBcJ_T0047842.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973854 45974852 + Gtpbp2 protein_coding processed_transcript MGP_BALBcJ_T0047843.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45973988 45977444 + Gtpbp2 protein_coding processed_transcript MGP_BALBcJ_T0047844.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45975726 45977515 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047845.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45975919 45978489 + Gtpbp2 protein_coding processed_transcript MGP_BALBcJ_T0047846.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45976011 45977882 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047847.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45978389 45980576 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047848.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45978471 45980026 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047849.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45979124 45980928 + MGP_BALBcJ_P0047849 Gtpbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047850.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45979560 45980715 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047851.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45979681 45980905 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047852.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45979924 45981088 + MGP_BALBcJ_P0047852 Gtpbp2 protein_coding protein_coding MGP_BALBcJ_T0047853.1 MGP_BALBcJ_G0023766.1 mouse_genomes_project 17 45980329 45981104 + Gtpbp2 protein_coding retained_intron MGP_BALBcJ_T0047490.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35188448 35201288 - MGP_BALBcJ_P0047490 Abcf1 protein_coding protein_coding MGP_BALBcJ_T0047491.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35188916 35190056 - Abcf1 protein_coding retained_intron MGP_BALBcJ_T0047492.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35188930 35189758 - Abcf1 protein_coding retained_intron MGP_BALBcJ_T0047493.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35189640 35191036 - Abcf1 protein_coding retained_intron MGP_BALBcJ_T0047494.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35190239 35191184 - Abcf1 protein_coding retained_intron MGP_BALBcJ_T0047495.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35193270 35195795 - Abcf1 protein_coding retained_intron MGP_BALBcJ_T0047496.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35195211 35200886 - MGP_BALBcJ_P0047496 Abcf1 protein_coding protein_coding MGP_BALBcJ_T0047497.1 MGP_BALBcJ_G0023623.1 mouse_genomes_project 17 35195776 35201288 - MGP_BALBcJ_P0047497 Abcf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102282.1 MGP_BALBcJ_G0040098.1 mouse_genomes_project 17 17297968 17330470 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006902.1 MGP_BALBcJ_G0005680.1 mouse_genomes_project 17 27807118 27808332 - Gm16196 lincRNA lincRNA MGP_BALBcJ_T0045360.1 MGP_BALBcJ_G0023073.1 mouse_genomes_project 17 527583 528243 + MGP_BALBcJ_P0045360 Cldn20 protein_coding protein_coding MGP_BALBcJ_T0048582.1 MGP_BALBcJ_G0024010.1 mouse_genomes_project 17 79829581 79892675 + MGP_BALBcJ_P0048582 Rmdn2 protein_coding protein_coding MGP_BALBcJ_T0048583.1 MGP_BALBcJ_G0024010.1 mouse_genomes_project 17 79835986 79892209 + MGP_BALBcJ_P0048583 Rmdn2 protein_coding unknown_likely_coding MGP_BALBcJ_T0047436.1 MGP_BALBcJ_G0023617.1 mouse_genomes_project 17 35090084 35100027 + MGP_BALBcJ_P0047436 Ppp1r18 protein_coding protein_coding MGP_BALBcJ_T0047437.1 MGP_BALBcJ_G0023617.1 mouse_genomes_project 17 35090116 35099928 + MGP_BALBcJ_P0047437 Ppp1r18 protein_coding protein_coding MGP_BALBcJ_T0047438.1 MGP_BALBcJ_G0023617.1 mouse_genomes_project 17 35090547 35100032 + MGP_BALBcJ_P0047438 Ppp1r18 protein_coding protein_coding MGP_BALBcJ_T0047439.1 MGP_BALBcJ_G0023617.1 mouse_genomes_project 17 35091106 35100032 + MGP_BALBcJ_P0047439 Ppp1r18 protein_coding protein_coding MGP_BALBcJ_T0047440.1 MGP_BALBcJ_G0023617.1 mouse_genomes_project 17 35091151 35100023 + MGP_BALBcJ_P0047440 Ppp1r18 protein_coding protein_coding MGP_BALBcJ_T0047441.1 MGP_BALBcJ_G0023617.1 mouse_genomes_project 17 35092894 35100030 + MGP_BALBcJ_P0047441 Ppp1r18 protein_coding protein_coding MGP_BALBcJ_T0000987.1 MGP_BALBcJ_G0000915.1 mouse_genomes_project 17 51780137 51782508 + TEC TEC MGP_BALBcJ_T0048547.1 MGP_BALBcJ_G0023994.1 mouse_genomes_project 17 75715082 75729932 - MGP_BALBcJ_P0048547 Fam98a protein_coding protein_coding MGP_BALBcJ_T0048548.1 MGP_BALBcJ_G0023994.1 mouse_genomes_project 17 75717027 75718569 - Fam98a protein_coding retained_intron MGP_BALBcJ_T0048549.1 MGP_BALBcJ_G0023994.1 mouse_genomes_project 17 75722463 75729782 - Fam98a protein_coding retained_intron MGP_BALBcJ_T0045559.1 MGP_BALBcJ_G0023134.1 mouse_genomes_project 17 12292880 12402962 - MGP_BALBcJ_P0045559 Wdr27 protein_coding protein_coding MGP_BALBcJ_T0048709.1 MGP_BALBcJ_G0024063.1 mouse_genomes_project 17 87751004 87764021 - MGP_BALBcJ_P0048709 Calm2 protein_coding protein_coding MGP_BALBcJ_T0048710.1 MGP_BALBcJ_G0024063.1 mouse_genomes_project 17 87751871 87764075 - Calm2 protein_coding retained_intron MGP_BALBcJ_T0045698.1 MGP_BALBcJ_G0023203.1 mouse_genomes_project 17 20074260 20107255 - MGP_BALBcJ_P0045698 protein_coding protein_coding MGP_BALBcJ_T0045699.1 MGP_BALBcJ_G0023203.1 mouse_genomes_project 17 20085234 20106964 - protein_coding processed_transcript MGP_BALBcJ_T0045700.1 MGP_BALBcJ_G0023203.1 mouse_genomes_project 17 20104461 20444232 - protein_coding retained_intron MGP_BALBcJ_T0010210.1 MGP_BALBcJ_G0008335.1 mouse_genomes_project 17 92213836 92213971 + Gm44345 miRNA miRNA MGP_BALBcJ_T0099561.1 MGP_BALBcJ_G0037597.1 mouse_genomes_project 17 29127514 29127587 + Gm25049 snRNA snRNA MGP_BALBcJ_T0047519.1 MGP_BALBcJ_G0023632.1 mouse_genomes_project 17 35394440 35414262 - MGP_BALBcJ_P0047519 H2-Q4 protein_coding protein_coding MGP_BALBcJ_T0013235.1 MGP_BALBcJ_G0011332.1 mouse_genomes_project 17 37453717 37454211 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046360.1 MGP_BALBcJ_G0023378.1 mouse_genomes_project 17 25742590 25809740 + MGP_BALBcJ_P0046360 Itpr3 protein_coding protein_coding MGP_BALBcJ_T0099591.1 MGP_BALBcJ_G0037627.1 mouse_genomes_project 17 93620512 93620619 - Gm25935 snRNA snRNA MGP_BALBcJ_T0048503.1 MGP_BALBcJ_G0023981.1 mouse_genomes_project 17 74049550 74117122 - MGP_BALBcJ_P0048503 Xdh protein_coding protein_coding MGP_BALBcJ_T0006912.1 MGP_BALBcJ_G0005686.1 mouse_genomes_project 17 30969729 30998265 + Gm17276 lincRNA lincRNA MGP_BALBcJ_T0047483.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35147347 35148676 + Ppp1r10 protein_coding retained_intron MGP_BALBcJ_T0047484.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35147479 35180617 + MGP_BALBcJ_P0047484 Ppp1r10 protein_coding protein_coding MGP_BALBcJ_T0047485.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35147492 35148254 + Ppp1r10 protein_coding processed_transcript MGP_BALBcJ_T0047486.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35147695 35149270 + Ppp1r10 protein_coding retained_intron MGP_BALBcJ_T0047487.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35147911 35155210 + MGP_BALBcJ_P0047487 Ppp1r10 protein_coding protein_coding MGP_BALBcJ_T0047488.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35148109 35180617 + MGP_BALBcJ_P0047488 Ppp1r10 protein_coding protein_coding MGP_BALBcJ_T0047489.1 MGP_BALBcJ_G0023622.1 mouse_genomes_project 17 35157414 35159092 + Ppp1r10 protein_coding retained_intron MGP_BALBcJ_T0047552.1 MGP_BALBcJ_G0023645.1 mouse_genomes_project 17 36128181 36134663 + MGP_BALBcJ_P0047552 H2-M10.5 protein_coding protein_coding MGP_BALBcJ_T0045658.1 MGP_BALBcJ_G0023176.1 mouse_genomes_project 17 18597381 18598278 + MGP_BALBcJ_P0045658 Vmn1r225 protein_coding protein_coding MGP_BALBcJ_T0045615.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15427763 15429492 + Spaca6 protein_coding processed_transcript MGP_BALBcJ_T0045616.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15427937 15429125 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045617.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15428048 15436151 + MGP_BALBcJ_P0045617 Spaca6 protein_coding protein_coding MGP_BALBcJ_T0045618.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15428108 15440087 + MGP_BALBcJ_P0045618 Spaca6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045619.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15428224 15435590 + Spaca6 protein_coding processed_transcript MGP_BALBcJ_T0045620.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15428224 15435590 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045621.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15428488 15434804 + MGP_BALBcJ_P0045621 Spaca6 protein_coding protein_coding MGP_BALBcJ_T0045622.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15429093 15433234 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045623.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15430002 15434106 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045624.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15433029 15435603 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045625.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15434584 15436151 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045626.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15434774 15436147 + MGP_BALBcJ_P0045626 Spaca6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045627.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15435361 15436151 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045628.1 MGP_BALBcJ_G0023149.1 mouse_genomes_project 17 15435651 15436151 + Spaca6 protein_coding retained_intron MGP_BALBcJ_T0045582.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040539 13058113 + MGP_BALBcJ_P0045582 Tbp protein_coding protein_coding MGP_BALBcJ_T0045583.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040539 13069042 + MGP_BALBcJ_P0045583 Tbp protein_coding protein_coding MGP_BALBcJ_T0045584.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040539 13045252 + MGP_BALBcJ_P0045584 Tbp protein_coding protein_coding MGP_BALBcJ_T0045585.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040552 13048101 + MGP_BALBcJ_P0045585 Tbp protein_coding protein_coding MGP_BALBcJ_T0045586.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040561 13058113 + MGP_BALBcJ_P0045586 Tbp protein_coding protein_coding MGP_BALBcJ_T0045587.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040563 13048006 + MGP_BALBcJ_P0045587 Tbp protein_coding protein_coding MGP_BALBcJ_T0045588.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040573 13055021 + MGP_BALBcJ_P0045588 Tbp protein_coding protein_coding MGP_BALBcJ_T0045589.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040579 13045094 + MGP_BALBcJ_P0045589 Tbp protein_coding protein_coding MGP_BALBcJ_T0045590.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13040611 13058113 + MGP_BALBcJ_P0045590 Tbp protein_coding protein_coding MGP_BALBcJ_T0045591.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13045229 13057554 + MGP_BALBcJ_P0045591 Tbp protein_coding protein_coding MGP_BALBcJ_T0045592.1 MGP_BALBcJ_G0023141.1 mouse_genomes_project 17 13056131 13057621 + Tbp protein_coding retained_intron MGP_BALBcJ_T0047996.1 MGP_BALBcJ_G0023813.1 mouse_genomes_project 17 47493163 47551775 + MGP_BALBcJ_P0047996 Usp49 protein_coding protein_coding MGP_BALBcJ_T0047997.1 MGP_BALBcJ_G0023813.1 mouse_genomes_project 17 47513137 47536417 + MGP_BALBcJ_P0047997 Usp49 protein_coding protein_coding MGP_BALBcJ_T0047998.1 MGP_BALBcJ_G0023813.1 mouse_genomes_project 17 47536952 47545289 + MGP_BALBcJ_P0047998 Usp49 protein_coding protein_coding MGP_BALBcJ_T0047999.1 MGP_BALBcJ_G0023813.1 mouse_genomes_project 17 47537533 47544961 + MGP_BALBcJ_P0047999 Usp49 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003685.1 MGP_BALBcJ_G0003330.1 mouse_genomes_project 17 2429085 2457906 + Gm29050 antisense antisense MGP_BALBcJ_T0003686.1 MGP_BALBcJ_G0003330.1 mouse_genomes_project 17 2444621 2460162 + Gm29050 antisense antisense MGP_BALBcJ_T0046261.1 MGP_BALBcJ_G0023356.1 mouse_genomes_project 17 24749089 24808297 + MGP_BALBcJ_P0046261 Axin1 protein_coding protein_coding MGP_BALBcJ_T0046262.1 MGP_BALBcJ_G0023356.1 mouse_genomes_project 17 24749229 24807727 + MGP_BALBcJ_P0046262 Axin1 protein_coding protein_coding MGP_BALBcJ_T0046263.1 MGP_BALBcJ_G0023356.1 mouse_genomes_project 17 24749351 24807780 + MGP_BALBcJ_P0046263 Axin1 protein_coding protein_coding MGP_BALBcJ_T0046264.1 MGP_BALBcJ_G0023356.1 mouse_genomes_project 17 24753753 24796818 + MGP_BALBcJ_P0046264 Axin1 protein_coding protein_coding MGP_BALBcJ_T0046265.1 MGP_BALBcJ_G0023356.1 mouse_genomes_project 17 24800645 24801288 + Axin1 protein_coding retained_intron MGP_BALBcJ_T0047608.1 MGP_BALBcJ_G0023659.1 mouse_genomes_project 17 36436335 36449293 - MGP_BALBcJ_P0047608 Mog protein_coding protein_coding MGP_BALBcJ_T0047609.1 MGP_BALBcJ_G0023659.1 mouse_genomes_project 17 36437094 36449094 - MGP_BALBcJ_P0047609 Mog protein_coding protein_coding MGP_BALBcJ_T0100841.1 MGP_BALBcJ_G0038877.1 mouse_genomes_project 17 59177863 59177984 - Gm23769 snoRNA snoRNA MGP_BALBcJ_T0046644.1 MGP_BALBcJ_G0023441.1 mouse_genomes_project 17 29728902 29770585 + MGP_BALBcJ_P0046644 Glp1r protein_coding protein_coding MGP_BALBcJ_T0047730.1 MGP_BALBcJ_G0023742.1 mouse_genomes_project 17 43585675 43814689 + MGP_BALBcJ_P0047730 Rcan2 protein_coding protein_coding MGP_BALBcJ_T0047731.1 MGP_BALBcJ_G0023742.1 mouse_genomes_project 17 43729379 43812576 + MGP_BALBcJ_P0047731 Rcan2 protein_coding protein_coding MGP_BALBcJ_T0047732.1 MGP_BALBcJ_G0023742.1 mouse_genomes_project 17 43729585 43814689 + MGP_BALBcJ_P0047732 Rcan2 protein_coding protein_coding MGP_BALBcJ_T0048253.1 MGP_BALBcJ_G0023890.1 mouse_genomes_project 17 56542491 56543340 + MGP_BALBcJ_P0048253 Rpl36 protein_coding protein_coding MGP_BALBcJ_T0003713.1 MGP_BALBcJ_G0003346.1 mouse_genomes_project 17 26373484 26374993 + Gm15420 antisense antisense MGP_BALBcJ_T0046022.1 MGP_BALBcJ_G0023298.1 mouse_genomes_project 17 23505840 23524127 - MGP_BALBcJ_P0046022 Hn1l protein_coding protein_coding MGP_BALBcJ_T0045667.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19038707 19059275 + MGP_BALBcJ_P0045667 Ppp2r1a protein_coding protein_coding MGP_BALBcJ_T0045668.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19038883 19052139 + MGP_BALBcJ_P0045668 Ppp2r1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045669.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19049938 19052192 + Ppp2r1a protein_coding retained_intron MGP_BALBcJ_T0045670.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19050139 19052864 + MGP_BALBcJ_P0045670 Ppp2r1a protein_coding protein_coding MGP_BALBcJ_T0045671.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19052095 19053953 + Ppp2r1a protein_coding retained_intron MGP_BALBcJ_T0045672.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19052343 19055297 + Ppp2r1a protein_coding retained_intron MGP_BALBcJ_T0045673.1 MGP_BALBcJ_G0023185.1 mouse_genomes_project 17 19053844 19054621 + Ppp2r1a protein_coding retained_intron MGP_BALBcJ_T0010183.1 MGP_BALBcJ_G0008308.1 mouse_genomes_project 17 33945623 33945690 - Mir6970 miRNA miRNA MGP_BALBcJ_T0046302.1 MGP_BALBcJ_G0023363.1 mouse_genomes_project 17 24904157 24905045 - MGP_BALBcJ_P0046302 protein_coding protein_coding MGP_BALBcJ_T0048598.1 MGP_BALBcJ_G0024017.1 mouse_genomes_project 17 80437703 80449773 + MGP_BALBcJ_P0048598 Ttc39d protein_coding protein_coding MGP_BALBcJ_T0048599.1 MGP_BALBcJ_G0024017.1 mouse_genomes_project 17 80447750 80449772 + MGP_BALBcJ_P0048599 Ttc39d protein_coding protein_coding MGP_BALBcJ_T0048669.1 MGP_BALBcJ_G0024050.1 mouse_genomes_project 17 86254308 86420112 - MGP_BALBcJ_P0048669 Srbd1 protein_coding protein_coding MGP_BALBcJ_T0048302.1 MGP_BALBcJ_G0023920.1 mouse_genomes_project 17 57218519 57232747 + MGP_BALBcJ_P0048302 Trip10 protein_coding protein_coding MGP_BALBcJ_T0006903.1 MGP_BALBcJ_G0005681.1 mouse_genomes_project 17 27814449 27815559 + Gm16195 lincRNA lincRNA MGP_BALBcJ_T0047684.1 MGP_BALBcJ_G0023715.1 mouse_genomes_project 17 40030955 40056682 - MGP_BALBcJ_P0047684 protein_coding protein_coding MGP_BALBcJ_T0006879.1 MGP_BALBcJ_G0005661.1 mouse_genomes_project 17 12772528 12781727 - Gm5091 lincRNA lincRNA MGP_BALBcJ_T0006972.1 MGP_BALBcJ_G0005731.1 mouse_genomes_project 17 91905462 91944693 + Gm15404 lincRNA lincRNA MGP_BALBcJ_T0047654.1 MGP_BALBcJ_G0023690.1 mouse_genomes_project 17 37168709 37173844 + MGP_BALBcJ_P0047654 protein_coding protein_coding MGP_BALBcJ_T0017565.1 MGP_BALBcJ_G0015295.1 mouse_genomes_project 17 91193573 91199524 + 4930480K15Rik processed_transcript processed_transcript MGP_BALBcJ_T0046954.1 MGP_BALBcJ_G0023515.1 mouse_genomes_project 17 32956395 32961399 - MGP_BALBcJ_P0046954 protein_coding protein_coding MGP_BALBcJ_T0046241.1 MGP_BALBcJ_G0023349.1 mouse_genomes_project 17 24557086 24569313 + MGP_BALBcJ_P0046241 D630044L22Rik protein_coding protein_coding MGP_BALBcJ_T0047651.1 MGP_BALBcJ_G0023687.1 mouse_genomes_project 17 37137035 37173663 + MGP_BALBcJ_P0047651 protein_coding protein_coding MGP_BALBcJ_T0045708.1 MGP_BALBcJ_G0023208.1 mouse_genomes_project 17 20277073 20280528 - MGP_BALBcJ_P0045708 protein_coding protein_coding MGP_BALBcJ_T0045656.1 MGP_BALBcJ_G0023174.1 mouse_genomes_project 17 18503404 18504301 + MGP_BALBcJ_P0045656 Vmn1r224 protein_coding protein_coding MGP_BALBcJ_T0006966.1 MGP_BALBcJ_G0005728.1 mouse_genomes_project 17 87584479 87591153 - 4833418N02Rik lincRNA lincRNA MGP_BALBcJ_T0006967.1 MGP_BALBcJ_G0005728.1 mouse_genomes_project 17 87584514 87592274 - 4833418N02Rik lincRNA lincRNA MGP_BALBcJ_T0006968.1 MGP_BALBcJ_G0005728.1 mouse_genomes_project 17 87584840 87591960 - 4833418N02Rik lincRNA lincRNA MGP_BALBcJ_T0006969.1 MGP_BALBcJ_G0005728.1 mouse_genomes_project 17 87589702 87592239 - 4833418N02Rik lincRNA lincRNA MGP_BALBcJ_T0017542.1 MGP_BALBcJ_G0015291.1 mouse_genomes_project 17 46982288 47176613 + Trerf1 processed_transcript retained_intron MGP_BALBcJ_T0017543.1 MGP_BALBcJ_G0015291.1 mouse_genomes_project 17 46982341 47209336 + Trerf1 processed_transcript processed_transcript MGP_BALBcJ_T0017544.1 MGP_BALBcJ_G0015291.1 mouse_genomes_project 17 46982341 47206856 + Trerf1 processed_transcript processed_transcript MGP_BALBcJ_T0017545.1 MGP_BALBcJ_G0015291.1 mouse_genomes_project 17 46982615 47166130 + Trerf1 processed_transcript retained_intron MGP_BALBcJ_T0017546.1 MGP_BALBcJ_G0015291.1 mouse_genomes_project 17 47059718 47166130 + Trerf1 processed_transcript retained_intron MGP_BALBcJ_T0017547.1 MGP_BALBcJ_G0015291.1 mouse_genomes_project 17 47141445 47206861 + Trerf1 processed_transcript processed_transcript MGP_BALBcJ_T0047801.1 MGP_BALBcJ_G0023758.1 mouse_genomes_project 17 45425296 45448783 - MGP_BALBcJ_P0047801 Capn11 protein_coding protein_coding MGP_BALBcJ_T0047802.1 MGP_BALBcJ_G0023758.1 mouse_genomes_project 17 45437713 45448755 - MGP_BALBcJ_P0047802 Capn11 protein_coding non_stop_decay MGP_BALBcJ_T0102349.1 MGP_BALBcJ_G0040165.1 mouse_genomes_project 17 36589923 36590770 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102359.1 MGP_BALBcJ_G0040175.1 mouse_genomes_project 17 36883340 36886708 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047875.1 MGP_BALBcJ_G0023773.1 mouse_genomes_project 17 46110205 46113827 + MGP_BALBcJ_P0047875 Dlk2 protein_coding protein_coding MGP_BALBcJ_T0047876.1 MGP_BALBcJ_G0023773.1 mouse_genomes_project 17 46110205 46116092 + MGP_BALBcJ_P0047876 Dlk2 protein_coding protein_coding MGP_BALBcJ_T0047877.1 MGP_BALBcJ_G0023773.1 mouse_genomes_project 17 46110816 46116099 + MGP_BALBcJ_P0047877 Dlk2 protein_coding protein_coding MGP_BALBcJ_T0046725.1 MGP_BALBcJ_G0023461.1 mouse_genomes_project 17 31046916 31052442 - MGP_BALBcJ_P0046725 Ephx3 protein_coding protein_coding MGP_BALBcJ_T0046726.1 MGP_BALBcJ_G0023461.1 mouse_genomes_project 17 31047501 31052528 - MGP_BALBcJ_P0046726 Ephx3 protein_coding protein_coding MGP_BALBcJ_T0046286.1 MGP_BALBcJ_G0023360.1 mouse_genomes_project 17 24824283 24858867 - MGP_BALBcJ_P0046286 Fam234a protein_coding protein_coding MGP_BALBcJ_T0046287.1 MGP_BALBcJ_G0023360.1 mouse_genomes_project 17 24825174 24858786 - MGP_BALBcJ_P0046287 Fam234a protein_coding protein_coding MGP_BALBcJ_T0046288.1 MGP_BALBcJ_G0023360.1 mouse_genomes_project 17 24826005 24828676 - MGP_BALBcJ_P0046288 Fam234a protein_coding protein_coding MGP_BALBcJ_T0046289.1 MGP_BALBcJ_G0023360.1 mouse_genomes_project 17 24827648 24829398 - Fam234a protein_coding retained_intron MGP_BALBcJ_T0046290.1 MGP_BALBcJ_G0023360.1 mouse_genomes_project 17 24830723 24833026 - MGP_BALBcJ_P0046290 Fam234a protein_coding protein_coding MGP_BALBcJ_T0102310.1 MGP_BALBcJ_G0040126.1 mouse_genomes_project 17 32785970 32789052 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048388.1 MGP_BALBcJ_G0023948.1 mouse_genomes_project 17 66649761 66691754 - MGP_BALBcJ_P0048388 Themis3 protein_coding protein_coding MGP_BALBcJ_T0010199.1 MGP_BALBcJ_G0008324.1 mouse_genomes_project 17 57186111 57186168 - Mir6978 miRNA miRNA MGP_BALBcJ_T0006872.1 MGP_BALBcJ_G0005655.1 mouse_genomes_project 17 5674912 5684972 - Gm16702 lincRNA lincRNA MGP_BALBcJ_T0045652.1 MGP_BALBcJ_G0023170.1 mouse_genomes_project 17 18172509 18173493 - MGP_BALBcJ_P0045652 protein_coding protein_coding MGP_BALBcJ_T0046993.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33079114 33088820 - MGP_BALBcJ_P0046993 Brd2 protein_coding protein_coding MGP_BALBcJ_T0046994.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33079114 33089393 - MGP_BALBcJ_P0046994 Brd2 protein_coding protein_coding MGP_BALBcJ_T0046995.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33079121 33087485 - MGP_BALBcJ_P0046995 Brd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046996.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33079457 33085563 - MGP_BALBcJ_P0046996 Brd2 protein_coding protein_coding MGP_BALBcJ_T0046997.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33079778 33080824 - Brd2 protein_coding retained_intron MGP_BALBcJ_T0046998.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33080850 33082042 - Brd2 protein_coding retained_intron MGP_BALBcJ_T0046999.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33080852 33082068 - MGP_BALBcJ_P0046999 Brd2 protein_coding protein_coding MGP_BALBcJ_T0047000.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33080887 33082167 - MGP_BALBcJ_P0047000 Brd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047001.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33081176 33089061 - MGP_BALBcJ_P0047001 Brd2 protein_coding protein_coding MGP_BALBcJ_T0047002.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33081854 33082561 - Brd2 protein_coding retained_intron MGP_BALBcJ_T0047003.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33086601 33089023 - Brd2 protein_coding processed_transcript MGP_BALBcJ_T0047004.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33086631 33089695 - Brd2 protein_coding processed_transcript MGP_BALBcJ_T0047005.1 MGP_BALBcJ_G0023523.1 mouse_genomes_project 17 33086940 33089710 - Brd2 protein_coding processed_transcript MGP_BALBcJ_T0048480.1 MGP_BALBcJ_G0023971.1 mouse_genomes_project 17 71826646 71838581 + Fam179a protein_coding processed_transcript MGP_BALBcJ_T0048481.1 MGP_BALBcJ_G0023971.1 mouse_genomes_project 17 71826646 71882864 + MGP_BALBcJ_P0048481 Fam179a protein_coding protein_coding MGP_BALBcJ_T0048482.1 MGP_BALBcJ_G0023971.1 mouse_genomes_project 17 71826650 71842565 + Fam179a protein_coding processed_transcript MGP_BALBcJ_T0048483.1 MGP_BALBcJ_G0023971.1 mouse_genomes_project 17 71838213 71882864 + MGP_BALBcJ_P0048483 Fam179a protein_coding protein_coding MGP_BALBcJ_T0048484.1 MGP_BALBcJ_G0023971.1 mouse_genomes_project 17 71840101 71882738 + MGP_BALBcJ_P0048484 Fam179a protein_coding protein_coding MGP_BALBcJ_T0048485.1 MGP_BALBcJ_G0023971.1 mouse_genomes_project 17 71866549 71882864 + Fam179a protein_coding retained_intron MGP_BALBcJ_T0048493.1 MGP_BALBcJ_G0023977.1 mouse_genomes_project 17 73270242 73328932 + MGP_BALBcJ_P0048493 Lclat1 protein_coding protein_coding MGP_BALBcJ_T0048494.1 MGP_BALBcJ_G0023977.1 mouse_genomes_project 17 73270245 73359620 + MGP_BALBcJ_P0048494 Lclat1 protein_coding protein_coding MGP_BALBcJ_T0048495.1 MGP_BALBcJ_G0023977.1 mouse_genomes_project 17 73270251 73405640 + MGP_BALBcJ_P0048495 Lclat1 protein_coding protein_coding MGP_BALBcJ_T0048496.1 MGP_BALBcJ_G0023977.1 mouse_genomes_project 17 73329929 73402180 + Lclat1 protein_coding processed_transcript MGP_BALBcJ_T0048497.1 MGP_BALBcJ_G0023977.1 mouse_genomes_project 17 73366976 73402643 + Lclat1 protein_coding processed_transcript MGP_BALBcJ_T0003714.1 MGP_BALBcJ_G0003347.1 mouse_genomes_project 17 26700620 26706387 - Gm15597 antisense antisense MGP_BALBcJ_T0099563.1 MGP_BALBcJ_G0037599.1 mouse_genomes_project 17 31696872 31697036 - Gm23294 snRNA snRNA MGP_BALBcJ_T0047255.1 MGP_BALBcJ_G0023575.1 mouse_genomes_project 17 34155390 34168841 + MGP_BALBcJ_P0047255 Clic1 protein_coding protein_coding MGP_BALBcJ_T0047256.1 MGP_BALBcJ_G0023575.1 mouse_genomes_project 17 34158746 34161988 + Clic1 protein_coding retained_intron MGP_BALBcJ_T0013240.1 MGP_BALBcJ_G0011337.1 mouse_genomes_project 17 41123133 41124134 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046047.1 MGP_BALBcJ_G0023303.1 mouse_genomes_project 17 23683950 23688459 + MGP_BALBcJ_P0046047 Ptx4 protein_coding protein_coding MGP_BALBcJ_T0048157.1 MGP_BALBcJ_G0023858.1 mouse_genomes_project 17 55514607 55538934 - MGP_BALBcJ_P0048157 Vmn2r118 protein_coding protein_coding MGP_BALBcJ_T0046623.1 MGP_BALBcJ_G0023435.1 mouse_genomes_project 17 28496119 28523628 - MGP_BALBcJ_P0046623 Ccdc167 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046624.1 MGP_BALBcJ_G0023435.1 mouse_genomes_project 17 28504193 28523604 - MGP_BALBcJ_P0046624 Ccdc167 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046625.1 MGP_BALBcJ_G0023435.1 mouse_genomes_project 17 28504939 28523628 - MGP_BALBcJ_P0046625 Ccdc167 protein_coding protein_coding MGP_BALBcJ_T0046626.1 MGP_BALBcJ_G0023435.1 mouse_genomes_project 17 28506617 28523582 - MGP_BALBcJ_P0046626 Ccdc167 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046627.1 MGP_BALBcJ_G0023435.1 mouse_genomes_project 17 28509950 28523631 - MGP_BALBcJ_P0046627 Ccdc167 protein_coding protein_coding MGP_BALBcJ_T0046628.1 MGP_BALBcJ_G0023435.1 mouse_genomes_project 17 28519591 28523583 - Ccdc167 protein_coding processed_transcript MGP_BALBcJ_T0047333.1 MGP_BALBcJ_G0023594.1 mouse_genomes_project 17 34313993 34316622 - MGP_BALBcJ_P0047333 Tnf protein_coding protein_coding MGP_BALBcJ_T0047334.1 MGP_BALBcJ_G0023594.1 mouse_genomes_project 17 34314119 34316619 - MGP_BALBcJ_P0047334 Tnf protein_coding protein_coding MGP_BALBcJ_T0048682.1 MGP_BALBcJ_G0024057.1 mouse_genomes_project 17 87289751 87316277 - MGP_BALBcJ_P0048682 Pigf protein_coding protein_coding MGP_BALBcJ_T0048391.1 MGP_BALBcJ_G0023950.1 mouse_genomes_project 17 67748053 67749812 - MGP_BALBcJ_P0048391 Lrrc30 protein_coding protein_coding MGP_BALBcJ_T0100824.1 MGP_BALBcJ_G0038860.1 mouse_genomes_project 17 9565550 9565690 + Gm24794 snoRNA snoRNA MGP_BALBcJ_T0048050.1 MGP_BALBcJ_G0023824.1 mouse_genomes_project 17 48047742 48064117 - MGP_BALBcJ_P0048050 protein_coding protein_coding MGP_BALBcJ_T0102348.1 MGP_BALBcJ_G0040164.1 mouse_genomes_project 17 36394214 36396411 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048264.1 MGP_BALBcJ_G0023899.1 mouse_genomes_project 17 56710286 56766591 - MGP_BALBcJ_P0048264 Rfx2 protein_coding protein_coding MGP_BALBcJ_T0048265.1 MGP_BALBcJ_G0023899.1 mouse_genomes_project 17 56710286 56766591 - MGP_BALBcJ_P0048265 Rfx2 protein_coding protein_coding MGP_BALBcJ_T0003741.1 MGP_BALBcJ_G0003367.1 mouse_genomes_project 17 35084869 35091378 - Ppp1r18os antisense antisense MGP_BALBcJ_T0047816.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45814399 45829211 - MGP_BALBcJ_P0047816 protein_coding protein_coding MGP_BALBcJ_T0047817.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45814399 45829765 - MGP_BALBcJ_P0047817 protein_coding protein_coding MGP_BALBcJ_T0047818.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45814402 45829773 - MGP_BALBcJ_P0047818 protein_coding protein_coding MGP_BALBcJ_T0047819.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45815880 45822260 - protein_coding retained_intron MGP_BALBcJ_T0047820.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45815938 45829765 - MGP_BALBcJ_P0047820 protein_coding protein_coding MGP_BALBcJ_T0047821.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45816001 45822277 - protein_coding retained_intron MGP_BALBcJ_T0047822.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45816107 45818768 - protein_coding retained_intron MGP_BALBcJ_T0047823.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45816226 45828752 - MGP_BALBcJ_P0047823 protein_coding protein_coding MGP_BALBcJ_T0047824.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45816228 45822198 - protein_coding retained_intron MGP_BALBcJ_T0047825.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45816253 45828752 - MGP_BALBcJ_P0047825 protein_coding protein_coding MGP_BALBcJ_T0047826.1 MGP_BALBcJ_G0023762.1 mouse_genomes_project 17 45822591 45828752 - protein_coding retained_intron MGP_BALBcJ_T0046751.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31251479 31264454 - MGP_BALBcJ_P0046751 Rasal3 protein_coding protein_coding MGP_BALBcJ_T0046752.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31251481 31264430 - MGP_BALBcJ_P0046752 Rasal3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046753.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31251490 31264439 - Rasal3 protein_coding retained_intron MGP_BALBcJ_T0046754.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31251737 31252329 - Rasal3 protein_coding retained_intron MGP_BALBcJ_T0046755.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31251744 31264452 - MGP_BALBcJ_P0046755 Rasal3 protein_coding protein_coding MGP_BALBcJ_T0046756.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31251793 31264408 - MGP_BALBcJ_P0046756 Rasal3 protein_coding protein_coding MGP_BALBcJ_T0046757.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31253459 31254547 - Rasal3 protein_coding retained_intron MGP_BALBcJ_T0046758.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31254743 31256192 - Rasal3 protein_coding retained_intron MGP_BALBcJ_T0046759.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31256387 31257530 - Rasal3 protein_coding retained_intron MGP_BALBcJ_T0046760.1 MGP_BALBcJ_G0023466.1 mouse_genomes_project 17 31259614 31264452 - Rasal3 protein_coding retained_intron MGP_BALBcJ_T0102289.1 MGP_BALBcJ_G0040105.1 mouse_genomes_project 17 18413311 18420630 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048188.1 MGP_BALBcJ_G0023873.1 mouse_genomes_project 17 56015218 56023243 - MGP_BALBcJ_P0048188 Plin4 protein_coding protein_coding MGP_BALBcJ_T0048507.1 MGP_BALBcJ_G0023985.1 mouse_genomes_project 17 74473636 74490490 - MGP_BALBcJ_P0048507 Dpy30 protein_coding unknown_likely_coding MGP_BALBcJ_T0047282.1 MGP_BALBcJ_G0023583.1 mouse_genomes_project 17 34219413 34224310 + MGP_BALBcJ_P0047282 Ly6g5c protein_coding protein_coding MGP_BALBcJ_T0047031.1 MGP_BALBcJ_G0023532.1 mouse_genomes_project 17 33234125 33242383 + MGP_BALBcJ_P0047031 H2-Ob protein_coding protein_coding MGP_BALBcJ_T0047032.1 MGP_BALBcJ_G0023532.1 mouse_genomes_project 17 33234127 33237395 + H2-Ob protein_coding retained_intron MGP_BALBcJ_T0047033.1 MGP_BALBcJ_G0023532.1 mouse_genomes_project 17 33234153 33242274 + MGP_BALBcJ_P0047033 H2-Ob protein_coding protein_coding MGP_BALBcJ_T0047034.1 MGP_BALBcJ_G0023532.1 mouse_genomes_project 17 33235910 33240936 + MGP_BALBcJ_P0047034 H2-Ob protein_coding protein_coding MGP_BALBcJ_T0045822.1 MGP_BALBcJ_G0023252.1 mouse_genomes_project 17 22576157 22601689 - MGP_BALBcJ_P0045822 Kctd5 protein_coding protein_coding MGP_BALBcJ_T0045823.1 MGP_BALBcJ_G0023252.1 mouse_genomes_project 17 22584184 22596495 - Kctd5 protein_coding processed_transcript MGP_BALBcJ_T0046639.1 MGP_BALBcJ_G0023438.1 mouse_genomes_project 17 29027025 29395632 - MGP_BALBcJ_P0046639 Btbd9 protein_coding protein_coding MGP_BALBcJ_T0046640.1 MGP_BALBcJ_G0023438.1 mouse_genomes_project 17 29027025 29395632 - MGP_BALBcJ_P0046640 Btbd9 protein_coding protein_coding MGP_BALBcJ_T0046641.1 MGP_BALBcJ_G0023438.1 mouse_genomes_project 17 29323256 29347541 - MGP_BALBcJ_P0046641 Btbd9 protein_coding unknown_likely_coding MGP_BALBcJ_T0048106.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49529387 49672124 + Kif6 protein_coding retained_intron MGP_BALBcJ_T0048107.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49529390 49591188 + MGP_BALBcJ_P0048107 Kif6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048108.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49529423 49829115 + MGP_BALBcJ_P0048108 Kif6 protein_coding protein_coding MGP_BALBcJ_T0048109.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49630411 49672124 + Kif6 protein_coding retained_intron MGP_BALBcJ_T0048110.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49655082 49672126 + Kif6 protein_coding retained_intron MGP_BALBcJ_T0048111.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49670646 49675751 + Kif6 protein_coding retained_intron MGP_BALBcJ_T0048112.1 MGP_BALBcJ_G0023841.1 mouse_genomes_project 17 49805862 49829115 + Kif6 protein_coding retained_intron MGP_BALBcJ_T0003718.1 MGP_BALBcJ_G0003351.1 mouse_genomes_project 17 27719449 27731011 + Gm16191 antisense antisense MGP_BALBcJ_T0003719.1 MGP_BALBcJ_G0003351.1 mouse_genomes_project 17 27728305 27728963 + Gm16191 antisense antisense MGP_BALBcJ_T0010189.1 MGP_BALBcJ_G0008314.1 mouse_genomes_project 17 35092793 35092889 - Gm28033 miRNA miRNA MGP_BALBcJ_T0099553.1 MGP_BALBcJ_G0037589.1 mouse_genomes_project 17 1709670 1709777 + Gm23186 snRNA snRNA MGP_BALBcJ_T0003705.1 MGP_BALBcJ_G0003339.1 mouse_genomes_project 17 22250916 22257329 + Gm16275 antisense antisense MGP_BALBcJ_T0048090.1 MGP_BALBcJ_G0023837.1 mouse_genomes_project 17 48357681 48371406 + MGP_BALBcJ_P0048090 Unc5cl protein_coding protein_coding MGP_BALBcJ_T0048091.1 MGP_BALBcJ_G0023837.1 mouse_genomes_project 17 48365107 48371400 + MGP_BALBcJ_P0048091 Unc5cl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048092.1 MGP_BALBcJ_G0023837.1 mouse_genomes_project 17 48365132 48445289 + MGP_BALBcJ_P0048092 Unc5cl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048093.1 MGP_BALBcJ_G0023837.1 mouse_genomes_project 17 48365138 48367753 + MGP_BALBcJ_P0048093 Unc5cl protein_coding protein_coding MGP_BALBcJ_T0048094.1 MGP_BALBcJ_G0023837.1 mouse_genomes_project 17 48365156 48371398 + MGP_BALBcJ_P0048094 Unc5cl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048095.1 MGP_BALBcJ_G0023837.1 mouse_genomes_project 17 48365176 48445182 + MGP_BALBcJ_P0048095 Unc5cl protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048553.1 MGP_BALBcJ_G0023997.1 mouse_genomes_project 17 78723065 78818305 + MGP_BALBcJ_P0048553 Vit protein_coding protein_coding MGP_BALBcJ_T0046516.1 MGP_BALBcJ_G0023412.1 mouse_genomes_project 17 27548825 27561265 + MGP_BALBcJ_P0046516 Mapk13 protein_coding protein_coding MGP_BALBcJ_T0046517.1 MGP_BALBcJ_G0023412.1 mouse_genomes_project 17 27548854 27560786 + Mapk13 protein_coding retained_intron MGP_BALBcJ_T0046518.1 MGP_BALBcJ_G0023412.1 mouse_genomes_project 17 27548867 27561113 + MGP_BALBcJ_P0046518 Mapk13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046519.1 MGP_BALBcJ_G0023412.1 mouse_genomes_project 17 27548890 27560129 + Mapk13 protein_coding retained_intron MGP_BALBcJ_T0048295.1 MGP_BALBcJ_G0023916.1 mouse_genomes_project 17 57113105 57116886 - MGP_BALBcJ_P0048295 Cd70 protein_coding protein_coding MGP_BALBcJ_T0045994.1 MGP_BALBcJ_G0023296.1 mouse_genomes_project 17 23457777 23458950 + MGP_BALBcJ_P0045994 Mrps34 protein_coding protein_coding MGP_BALBcJ_T0045995.1 MGP_BALBcJ_G0023296.1 mouse_genomes_project 17 23457784 23460173 + MGP_BALBcJ_P0045995 Mrps34 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045996.1 MGP_BALBcJ_G0023296.1 mouse_genomes_project 17 23457796 23458777 + Mrps34 protein_coding retained_intron MGP_BALBcJ_T0102325.1 MGP_BALBcJ_G0040141.1 mouse_genomes_project 17 35274736 35323726 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100829.1 MGP_BALBcJ_G0038865.1 mouse_genomes_project 17 23277706 23277834 - Snora78 snoRNA snoRNA MGP_BALBcJ_T0046652.1 MGP_BALBcJ_G0023445.1 mouse_genomes_project 17 29979096 29982301 - MGP_BALBcJ_P0046652 Tff2 protein_coding protein_coding MGP_BALBcJ_T0046543.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27762342 27800189 - MGP_BALBcJ_P0046543 Stk38 protein_coding protein_coding MGP_BALBcJ_T0046544.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27762474 27764535 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046545.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27763694 27800189 - MGP_BALBcJ_P0046545 Stk38 protein_coding protein_coding MGP_BALBcJ_T0046546.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27764396 27773323 - Stk38 protein_coding retained_intron MGP_BALBcJ_T0046547.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27764549 27766177 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046548.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27765739 27773612 - Stk38 protein_coding retained_intron MGP_BALBcJ_T0046549.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27765800 27770937 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046550.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27765800 27771472 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046551.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27766028 27771222 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046552.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27768854 27771207 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046553.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27771227 27800197 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046554.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27774686 27791162 - Stk38 protein_coding retained_intron MGP_BALBcJ_T0046555.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27779069 27782552 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046556.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27782538 27799987 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046557.1 MGP_BALBcJ_G0023418.1 mouse_genomes_project 17 27788670 27800148 - Stk38 protein_coding processed_transcript MGP_BALBcJ_T0046269.1 MGP_BALBcJ_G0023358.1 mouse_genomes_project 17 24808711 24813629 - MGP_BALBcJ_P0046269 Arhgdig protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046271.1 MGP_BALBcJ_G0023358.1 mouse_genomes_project 17 24811668 24813836 - MGP_BALBcJ_P0046271 Arhgdig protein_coding protein_coding MGP_BALBcJ_T0046272.1 MGP_BALBcJ_G0023358.1 mouse_genomes_project 17 24811882 24813855 - MGP_BALBcJ_P0046272 Arhgdig protein_coding protein_coding MGP_BALBcJ_T0046273.1 MGP_BALBcJ_G0023358.1 mouse_genomes_project 17 24811921 24820283 - Arhgdig protein_coding processed_transcript MGP_BALBcJ_T0046274.1 MGP_BALBcJ_G0023358.1 mouse_genomes_project 17 24811976 24813630 - Arhgdig protein_coding retained_intron MGP_BALBcJ_T0047632.1 MGP_BALBcJ_G0023672.1 mouse_genomes_project 17 36739633 36758470 - MGP_BALBcJ_P0047632 Olfr101 protein_coding protein_coding MGP_BALBcJ_T0047378.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34870824 34885596 - MGP_BALBcJ_P0047378 Vars2 protein_coding protein_coding MGP_BALBcJ_T0047379.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34870845 34880948 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047380.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34871574 34878131 - MGP_BALBcJ_P0047380 Vars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047381.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34871741 34877674 - MGP_BALBcJ_P0047381 Vars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047382.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34871811 34873622 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047383.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34871927 34872720 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047384.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34874758 34875253 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047385.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34874890 34877187 - MGP_BALBcJ_P0047385 Vars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047386.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34875231 34876851 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047387.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34879096 34884737 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047388.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34880802 34885544 - Vars2 protein_coding retained_intron MGP_BALBcJ_T0047389.1 MGP_BALBcJ_G0023609.1 mouse_genomes_project 17 34880886 34885553 - MGP_BALBcJ_P0047389 Vars2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003723.1 MGP_BALBcJ_G0003354.1 mouse_genomes_project 17 29990704 30000265 + Gm15318 antisense antisense MGP_BALBcJ_T0003724.1 MGP_BALBcJ_G0003354.1 mouse_genomes_project 17 29990704 29999430 + Gm15318 antisense antisense MGP_BALBcJ_T0003725.1 MGP_BALBcJ_G0003354.1 mouse_genomes_project 17 29990704 30000994 + Gm15318 antisense antisense MGP_BALBcJ_T0047204.1 MGP_BALBcJ_G0023565.1 mouse_genomes_project 17 34016467 34032362 + Slc44a4 protein_coding retained_intron MGP_BALBcJ_T0047205.1 MGP_BALBcJ_G0023565.1 mouse_genomes_project 17 34016471 34032339 + MGP_BALBcJ_P0047205 Slc44a4 protein_coding protein_coding MGP_BALBcJ_T0047206.1 MGP_BALBcJ_G0023565.1 mouse_genomes_project 17 34019720 34032419 + MGP_BALBcJ_P0047206 Slc44a4 protein_coding protein_coding MGP_BALBcJ_T0098340.1 MGP_BALBcJ_G0036394.1 mouse_genomes_project 17 37042429 37043393 - pseudogene pseudogene MGP_BALBcJ_T0011419.1 MGP_BALBcJ_G0009544.1 mouse_genomes_project 17 85868267 85868539 + Gm27275 misc_RNA misc_RNA MGP_BALBcJ_T0047864.1 MGP_BALBcJ_G0023770.1 mouse_genomes_project 17 46060192 46064650 + MGP_BALBcJ_P0047864 Yipf3 protein_coding protein_coding MGP_BALBcJ_T0047865.1 MGP_BALBcJ_G0023770.1 mouse_genomes_project 17 46060237 46063601 + MGP_BALBcJ_P0047865 Yipf3 protein_coding protein_coding MGP_BALBcJ_T0047866.1 MGP_BALBcJ_G0023770.1 mouse_genomes_project 17 46060257 46064114 + Yipf3 protein_coding retained_intron MGP_BALBcJ_T0047867.1 MGP_BALBcJ_G0023770.1 mouse_genomes_project 17 46061141 46064017 + MGP_BALBcJ_P0047867 Yipf3 protein_coding protein_coding MGP_BALBcJ_T0047868.1 MGP_BALBcJ_G0023770.1 mouse_genomes_project 17 46062201 46063106 + Yipf3 protein_coding processed_transcript MGP_BALBcJ_T0047869.1 MGP_BALBcJ_G0023770.1 mouse_genomes_project 17 46063453 46064130 + Yipf3 protein_coding processed_transcript MGP_BALBcJ_T0045657.1 MGP_BALBcJ_G0023175.1 mouse_genomes_project 17 18555656 18574909 - MGP_BALBcJ_P0045657 Vmn2r108 protein_coding protein_coding MGP_BALBcJ_T0047626.1 MGP_BALBcJ_G0023666.1 mouse_genomes_project 17 36639477 36640782 - MGP_BALBcJ_P0047626 Olfr94 protein_coding protein_coding MGP_BALBcJ_T0048490.1 MGP_BALBcJ_G0023975.1 mouse_genomes_project 17 72990530 73005015 + MGP_BALBcJ_P0048490 Ypel5 protein_coding protein_coding MGP_BALBcJ_T0102284.1 MGP_BALBcJ_G0040100.1 mouse_genomes_project 17 17766160 17767066 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047586.1 MGP_BALBcJ_G0023656.1 mouse_genomes_project 17 36403457 36406981 - MGP_BALBcJ_P0047586 2410137M14Rik protein_coding protein_coding MGP_BALBcJ_T0047587.1 MGP_BALBcJ_G0023656.1 mouse_genomes_project 17 36403594 36406961 - MGP_BALBcJ_P0047587 2410137M14Rik protein_coding protein_coding MGP_BALBcJ_T0013236.1 MGP_BALBcJ_G0011333.1 mouse_genomes_project 17 37472830 37473480 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046811.1 MGP_BALBcJ_G0023488.1 mouse_genomes_project 17 32171639 32172594 + MGP_BALBcJ_P0046811 Olfr63 protein_coding protein_coding MGP_BALBcJ_T0013209.1 MGP_BALBcJ_G0011306.1 mouse_genomes_project 17 33613571 33613978 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047764.1 MGP_BALBcJ_G0023754.1 mouse_genomes_project 17 45355610 45359221 + MGP_BALBcJ_P0047764 Slc35b2 protein_coding protein_coding MGP_BALBcJ_T0100852.1 MGP_BALBcJ_G0038888.1 mouse_genomes_project 17 87348858 87348990 - Gm24648 snoRNA snoRNA MGP_BALBcJ_T0045675.1 MGP_BALBcJ_G0023187.1 mouse_genomes_project 17 19093053 19119653 + MGP_BALBcJ_P0045675 Zfp160 protein_coding protein_coding MGP_BALBcJ_T0047913.1 MGP_BALBcJ_G0023783.1 mouse_genomes_project 17 46394607 46461783 - MGP_BALBcJ_P0047913 Ptk7 protein_coding protein_coding MGP_BALBcJ_T0045666.1 MGP_BALBcJ_G0023184.1 mouse_genomes_project 17 19007647 19008806 - MGP_BALBcJ_P0045666 Vmn1r232 protein_coding protein_coding MGP_BALBcJ_T0046335.1 MGP_BALBcJ_G0023372.1 mouse_genomes_project 17 25605150 25609913 + MGP_BALBcJ_P0046335 Phf1 protein_coding protein_coding MGP_BALBcJ_T0046366.1 MGP_BALBcJ_G0023381.1 mouse_genomes_project 17 25876823 25891550 - MGP_BALBcJ_P0046366 Lemd2 protein_coding protein_coding MGP_BALBcJ_T0046810.1 MGP_BALBcJ_G0023487.1 mouse_genomes_project 17 32144330 32146946 - MGP_BALBcJ_P0046810 Zfp955b protein_coding protein_coding MGP_BALBcJ_T0013185.1 MGP_BALBcJ_G0011282.1 mouse_genomes_project 17 10090139 10091163 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046959.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32990961 32992027 - H2-Ke6 protein_coding retained_intron MGP_BALBcJ_T0046960.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32990961 32991684 - H2-Ke6 protein_coding retained_intron MGP_BALBcJ_T0046961.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32990961 32992984 - MGP_BALBcJ_P0046961 H2-Ke6 protein_coding protein_coding MGP_BALBcJ_T0046962.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32990964 32992974 - H2-Ke6 protein_coding retained_intron MGP_BALBcJ_T0046963.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32991085 32991881 - H2-Ke6 protein_coding retained_intron MGP_BALBcJ_T0046964.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32991336 32992791 - H2-Ke6 protein_coding processed_transcript MGP_BALBcJ_T0046965.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32991597 32992988 - MGP_BALBcJ_P0046965 H2-Ke6 protein_coding protein_coding MGP_BALBcJ_T0046966.1 MGP_BALBcJ_G0023518.1 mouse_genomes_project 17 32991842 32992966 - H2-Ke6 protein_coding retained_intron MGP_BALBcJ_T0046105.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23952635 24018210 - MGP_BALBcJ_P0046105 Cacna1h protein_coding protein_coding MGP_BALBcJ_T0046106.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23952636 24017595 - MGP_BALBcJ_P0046106 Cacna1h protein_coding unknown_likely_coding MGP_BALBcJ_T0046107.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23952638 24018210 - MGP_BALBcJ_P0046107 Cacna1h protein_coding protein_coding MGP_BALBcJ_T0046108.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23952645 24018210 - MGP_BALBcJ_P0046108 Cacna1h protein_coding protein_coding MGP_BALBcJ_T0046109.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23955238 23962492 - MGP_BALBcJ_P0046109 Cacna1h protein_coding protein_coding MGP_BALBcJ_T0046110.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23955550 23962120 - MGP_BALBcJ_P0046110 Cacna1h protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046111.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23955905 23957284 - Cacna1h protein_coding retained_intron MGP_BALBcJ_T0046112.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23970086 23971321 - Cacna1h protein_coding retained_intron MGP_BALBcJ_T0046113.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23974107 24018195 - Cacna1h protein_coding retained_intron MGP_BALBcJ_T0046114.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 23979485 24017705 - MGP_BALBcJ_P0046114 Cacna1h protein_coding protein_coding MGP_BALBcJ_T0046115.1 MGP_BALBcJ_G0023319.1 mouse_genomes_project 17 24016260 24018210 - Cacna1h protein_coding retained_intron MGP_BALBcJ_T0048571.1 MGP_BALBcJ_G0024006.1 mouse_genomes_project 17 79143191 79155819 + MGP_BALBcJ_P0048571 Ndufaf7 protein_coding protein_coding MGP_BALBcJ_T0003738.1 MGP_BALBcJ_G0003364.1 mouse_genomes_project 17 34706800 34708266 - Gm19553 antisense antisense MGP_BALBcJ_T0017503.1 MGP_BALBcJ_G0015274.1 mouse_genomes_project 17 8094050 8112835 + Gm16169 processed_transcript antisense MGP_BALBcJ_T0017504.1 MGP_BALBcJ_G0015274.1 mouse_genomes_project 17 8094055 8102799 + Gm16169 processed_transcript retained_intron MGP_BALBcJ_T0047854.1 MGP_BALBcJ_G0023767.1 mouse_genomes_project 17 45984689 46015081 - MGP_BALBcJ_P0047854 Polh protein_coding protein_coding MGP_BALBcJ_T0048720.1 MGP_BALBcJ_G0024068.1 mouse_genomes_project 17 88309609 88326609 + MGP_BALBcJ_P0048720 Msh6 protein_coding protein_coding MGP_BALBcJ_T0046177.1 MGP_BALBcJ_G0023339.1 mouse_genomes_project 17 24435440 24438272 - MGP_BALBcJ_P0046177 Rhbdl1 protein_coding protein_coding MGP_BALBcJ_T0046178.1 MGP_BALBcJ_G0023339.1 mouse_genomes_project 17 24435577 24438059 - MGP_BALBcJ_P0046178 Rhbdl1 protein_coding protein_coding MGP_BALBcJ_T0046179.1 MGP_BALBcJ_G0023339.1 mouse_genomes_project 17 24436749 24438228 - MGP_BALBcJ_P0046179 Rhbdl1 protein_coding protein_coding MGP_BALBcJ_T0010159.1 MGP_BALBcJ_G0008284.1 mouse_genomes_project 17 23139796 23139890 + Gm24589 miRNA miRNA MGP_BALBcJ_T0047564.1 MGP_BALBcJ_G0023648.1 mouse_genomes_project 17 36281101 36287596 - MGP_BALBcJ_P0047564 Trim15 protein_coding protein_coding MGP_BALBcJ_T0047565.1 MGP_BALBcJ_G0023648.1 mouse_genomes_project 17 36281103 36287619 - MGP_BALBcJ_P0047565 Trim15 protein_coding protein_coding MGP_BALBcJ_T0047566.1 MGP_BALBcJ_G0023648.1 mouse_genomes_project 17 36281724 36287155 - MGP_BALBcJ_P0047566 Trim15 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0006886.1 MGP_BALBcJ_G0005667.1 mouse_genomes_project 17 21150952 21185654 - Gm16386 lincRNA lincRNA MGP_BALBcJ_T0045687.1 MGP_BALBcJ_G0023196.1 mouse_genomes_project 17 19730418 19737448 + MGP_BALBcJ_P0045687 Zfp52 protein_coding protein_coding MGP_BALBcJ_T0048712.1 MGP_BALBcJ_G0024065.1 mouse_genomes_project 17 87998869 88049502 + MGP_BALBcJ_P0048712 Msh2 protein_coding protein_coding MGP_BALBcJ_T0048713.1 MGP_BALBcJ_G0024065.1 mouse_genomes_project 17 87999079 88005931 + Msh2 protein_coding retained_intron MGP_BALBcJ_T0048714.1 MGP_BALBcJ_G0024065.1 mouse_genomes_project 17 87999100 88035781 + Msh2 protein_coding retained_intron MGP_BALBcJ_T0048715.1 MGP_BALBcJ_G0024065.1 mouse_genomes_project 17 87999148 88011933 + MGP_BALBcJ_P0048715 Msh2 protein_coding protein_coding MGP_BALBcJ_T0048716.1 MGP_BALBcJ_G0024065.1 mouse_genomes_project 17 88015252 88022793 + Msh2 protein_coding retained_intron MGP_BALBcJ_T0048717.1 MGP_BALBcJ_G0024065.1 mouse_genomes_project 17 88022630 88043461 + MGP_BALBcJ_P0048717 Msh2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0013224.1 MGP_BALBcJ_G0011321.1 mouse_genomes_project 17 35821519 35822092 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047827.1 MGP_BALBcJ_G0023763.1 mouse_genomes_project 17 45908859 45925773 + MGP_BALBcJ_P0047827 Mrps18a protein_coding protein_coding MGP_BALBcJ_T0047828.1 MGP_BALBcJ_G0023763.1 mouse_genomes_project 17 45908868 45919990 + Mrps18a protein_coding retained_intron MGP_BALBcJ_T0047829.1 MGP_BALBcJ_G0023763.1 mouse_genomes_project 17 45908869 45922728 + MGP_BALBcJ_P0047829 Mrps18a protein_coding protein_coding MGP_BALBcJ_T0047831.1 MGP_BALBcJ_G0023763.1 mouse_genomes_project 17 45919665 45925733 + Mrps18a protein_coding processed_transcript MGP_BALBcJ_T0047832.1 MGP_BALBcJ_G0023763.1 mouse_genomes_project 17 45922137 45924586 + Mrps18a protein_coding retained_intron MGP_BALBcJ_T0047833.1 MGP_BALBcJ_G0023763.1 mouse_genomes_project 17 45922320 45925656 + Mrps18a protein_coding retained_intron MGP_BALBcJ_T0010164.1 MGP_BALBcJ_G0008289.1 mouse_genomes_project 17 25228797 25228923 - Gm22420 miRNA miRNA MGP_BALBcJ_T0013198.1 MGP_BALBcJ_G0011295.1 mouse_genomes_project 17 24885540 24886706 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003736.1 MGP_BALBcJ_G0003362.1 mouse_genomes_project 17 34080243 34085133 - Gm10501 antisense antisense MGP_BALBcJ_T0045638.1 MGP_BALBcJ_G0023157.1 mouse_genomes_project 17 15887131 15921616 - MGP_BALBcJ_P0045638 Vmn2r94 protein_coding protein_coding MGP_BALBcJ_T0048773.1 MGP_BALBcJ_G0024077.1 mouse_genomes_project 17 91427180 91428079 + MGP_BALBcJ_P0048773 Gm10308 protein_coding protein_coding MGP_BALBcJ_T0013223.1 MGP_BALBcJ_G0011320.1 mouse_genomes_project 17 35811007 35811375 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006887.1 MGP_BALBcJ_G0005668.1 mouse_genomes_project 17 22027227 22028772 + Gm26695 lincRNA lincRNA MGP_BALBcJ_T0003764.1 MGP_BALBcJ_G0003385.1 mouse_genomes_project 17 58937357 58953255 + Nudt12os antisense antisense MGP_BALBcJ_T0003765.1 MGP_BALBcJ_G0003385.1 mouse_genomes_project 17 58937381 58966330 + Nudt12os antisense antisense MGP_BALBcJ_T0003766.1 MGP_BALBcJ_G0003385.1 mouse_genomes_project 17 58958418 58966078 + Nudt12os antisense antisense MGP_BALBcJ_T0102279.1 MGP_BALBcJ_G0040095.1 mouse_genomes_project 17 16553522 16554836 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010162.1 MGP_BALBcJ_G0008287.1 mouse_genomes_project 17 24379255 24379327 + Mir6966 miRNA miRNA MGP_BALBcJ_T0047682.1 MGP_BALBcJ_G0023713.1 mouse_genomes_project 17 39941241 39942833 - MGP_BALBcJ_P0047682 Pgk2 protein_coding protein_coding MGP_BALBcJ_T0046599.1 MGP_BALBcJ_G0023428.1 mouse_genomes_project 17 28293154 28299613 + MGP_BALBcJ_P0046599 Pim1 protein_coding protein_coding MGP_BALBcJ_T0046068.1 MGP_BALBcJ_G0023309.1 mouse_genomes_project 17 23801707 23809282 - MGP_BALBcJ_P0046068 Gnptg protein_coding protein_coding MGP_BALBcJ_T0046069.1 MGP_BALBcJ_G0023309.1 mouse_genomes_project 17 23802693 23809274 - MGP_BALBcJ_P0046069 Gnptg protein_coding protein_coding MGP_BALBcJ_T0048605.1 MGP_BALBcJ_G0024021.1 mouse_genomes_project 17 80546795 80628669 + MGP_BALBcJ_P0048605 Arhgef33 protein_coding unknown_likely_coding MGP_BALBcJ_T0048606.1 MGP_BALBcJ_G0024021.1 mouse_genomes_project 17 80546797 80624358 + MGP_BALBcJ_P0048606 Arhgef33 protein_coding unknown_likely_coding MGP_BALBcJ_T0045927.1 MGP_BALBcJ_G0023272.1 mouse_genomes_project 17 23094118 23141333 + MGP_BALBcJ_P0045927 Pkd1 protein_coding protein_coding MGP_BALBcJ_T0045928.1 MGP_BALBcJ_G0023272.1 mouse_genomes_project 17 23094431 23133100 + MGP_BALBcJ_P0045928 Pkd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0006971.1 MGP_BALBcJ_G0005730.1 mouse_genomes_project 17 88486496 88500837 - Gm26612 lincRNA lincRNA MGP_BALBcJ_T0013232.1 MGP_BALBcJ_G0011329.1 mouse_genomes_project 17 37382197 37382855 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048267.1 MGP_BALBcJ_G0023901.1 mouse_genomes_project 17 56836311 56849685 + MGP_BALBcJ_P0048267 1700061G19Rik protein_coding protein_coding MGP_BALBcJ_T0048268.1 MGP_BALBcJ_G0023901.1 mouse_genomes_project 17 56836337 56838653 + 1700061G19Rik protein_coding retained_intron MGP_BALBcJ_T0048462.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71453247 71467779 - Smchd1 protein_coding processed_transcript MGP_BALBcJ_T0048463.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71453247 71586165 - MGP_BALBcJ_P0048463 Smchd1 protein_coding protein_coding MGP_BALBcJ_T0048464.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71455152 71457647 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0048465.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71457560 71473710 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0048466.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71459552 71462055 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0048467.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71468362 71472509 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0048468.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71503629 71504876 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0048469.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71506908 71507723 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0048473.1 MGP_BALBcJ_G0023966.1 mouse_genomes_project 17 71583350 71586150 - Smchd1 protein_coding retained_intron MGP_BALBcJ_T0013281.1 MGP_BALBcJ_G0011378.1 mouse_genomes_project 17 95129279 95129454 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047668.1 MGP_BALBcJ_G0023702.1 mouse_genomes_project 17 37649815 37656673 + MGP_BALBcJ_P0047668 protein_coding protein_coding MGP_BALBcJ_T0006914.1 MGP_BALBcJ_G0005688.1 mouse_genomes_project 17 31236553 31238593 + lincRNA lincRNA MGP_BALBcJ_T0047153.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33939795 33950707 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047154.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33939811 33950707 - MGP_BALBcJ_P0047154 Skiv2l protein_coding protein_coding MGP_BALBcJ_T0047155.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33939816 33950689 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047156.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33939868 33950695 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047157.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33941101 33941700 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047158.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33941173 33943395 - MGP_BALBcJ_P0047158 Skiv2l protein_coding protein_coding MGP_BALBcJ_T0047159.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33941927 33944979 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047160.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33945549 33947690 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047161.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33945626 33947162 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047162.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33945762 33946554 - Skiv2l protein_coding retained_intron MGP_BALBcJ_T0047163.1 MGP_BALBcJ_G0023558.1 mouse_genomes_project 17 33947044 33950692 - MGP_BALBcJ_P0047163 Skiv2l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046500.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27357838 27393219 - MGP_BALBcJ_P0046500 Srpk1 protein_coding protein_coding MGP_BALBcJ_T0046501.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27359717 27377555 - MGP_BALBcJ_P0046501 Srpk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046502.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27360115 27362552 - Srpk1 protein_coding retained_intron MGP_BALBcJ_T0046503.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27365605 27371030 - Srpk1 protein_coding retained_intron MGP_BALBcJ_T0046504.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27370479 27371407 - Srpk1 protein_coding retained_intron MGP_BALBcJ_T0046505.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27372690 27393149 - Srpk1 protein_coding retained_intron MGP_BALBcJ_T0046506.1 MGP_BALBcJ_G0023409.1 mouse_genomes_project 17 27390840 27393170 - MGP_BALBcJ_P0046506 Srpk1 protein_coding protein_coding MGP_BALBcJ_T0046780.1 MGP_BALBcJ_G0023475.1 mouse_genomes_project 17 31692086 31706156 - MGP_BALBcJ_P0046780 Zfp811 protein_coding protein_coding MGP_BALBcJ_T0046781.1 MGP_BALBcJ_G0023475.1 mouse_genomes_project 17 31693711 31697244 - MGP_BALBcJ_P0046781 Zfp811 protein_coding protein_coding MGP_BALBcJ_T0102304.1 MGP_BALBcJ_G0040120.1 mouse_genomes_project 17 21536603 21537254 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048436.1 MGP_BALBcJ_G0023961.1 mouse_genomes_project 17 71082079 71098674 - MGP_BALBcJ_P0048436 Myl12b protein_coding protein_coding MGP_BALBcJ_T0048437.1 MGP_BALBcJ_G0023961.1 mouse_genomes_project 17 71082430 71084126 - Myl12b protein_coding retained_intron MGP_BALBcJ_T0048438.1 MGP_BALBcJ_G0023961.1 mouse_genomes_project 17 71085087 71098417 - Myl12b protein_coding retained_intron MGP_BALBcJ_T0047044.1 MGP_BALBcJ_G0023537.1 mouse_genomes_project 17 33357272 33372024 + MGP_BALBcJ_P0047044 Btnl2 protein_coding protein_coding MGP_BALBcJ_T0047045.1 MGP_BALBcJ_G0023537.1 mouse_genomes_project 17 33357272 33372023 + MGP_BALBcJ_P0047045 Btnl2 protein_coding protein_coding MGP_BALBcJ_T0047038.1 MGP_BALBcJ_G0023534.1 mouse_genomes_project 17 33284379 33289485 - MGP_BALBcJ_P0047038 H2-Aa protein_coding protein_coding MGP_BALBcJ_T0047039.1 MGP_BALBcJ_G0023534.1 mouse_genomes_project 17 33284400 33289449 - MGP_BALBcJ_P0047039 H2-Aa protein_coding protein_coding MGP_BALBcJ_T0047040.1 MGP_BALBcJ_G0023534.1 mouse_genomes_project 17 33285406 33289435 - H2-Aa protein_coding retained_intron MGP_BALBcJ_T0047041.1 MGP_BALBcJ_G0023534.1 mouse_genomes_project 17 33288130 33289477 - H2-Aa protein_coding processed_transcript MGP_BALBcJ_T0098542.1 MGP_BALBcJ_G0036596.1 mouse_genomes_project 17 71617501 71617609 - Gm23115 rRNA rRNA MGP_BALBcJ_T0006899.1 MGP_BALBcJ_G0005678.1 mouse_genomes_project 17 27277419 27278187 - Gm20109 lincRNA lincRNA MGP_BALBcJ_T0048489.1 MGP_BALBcJ_G0023974.1 mouse_genomes_project 17 72027614 72767342 - MGP_BALBcJ_P0048489 Alk protein_coding protein_coding MGP_BALBcJ_T0000984.1 MGP_BALBcJ_G0000912.1 mouse_genomes_project 17 51725996 51729171 - TEC TEC MGP_BALBcJ_T0047953.1 MGP_BALBcJ_G0023802.1 mouse_genomes_project 17 46864271 46864532 - MGP_BALBcJ_P0047953 Gm16494 protein_coding protein_coding MGP_BALBcJ_T0045373.1 MGP_BALBcJ_G0023080.1 mouse_genomes_project 17 2887108 2984495 + MGP_BALBcJ_P0045373 Snx9 protein_coding protein_coding MGP_BALBcJ_T0098344.1 MGP_BALBcJ_G0036398.1 mouse_genomes_project 17 90778722 90779335 + pseudogene pseudogene MGP_BALBcJ_T0045405.1 MGP_BALBcJ_G0023086.1 mouse_genomes_project 17 3736781 3742486 - MGP_BALBcJ_P0045405 Dynlt1c protein_coding protein_coding MGP_BALBcJ_T0047642.1 MGP_BALBcJ_G0023680.1 mouse_genomes_project 17 36959439 36959922 + MGP_BALBcJ_P0047642 protein_coding protein_coding MGP_BALBcJ_T0046445.1 MGP_BALBcJ_G0023399.1 mouse_genomes_project 17 26977399 27049896 + MGP_BALBcJ_P0046445 Ppard protein_coding protein_coding MGP_BALBcJ_T0046446.1 MGP_BALBcJ_G0023399.1 mouse_genomes_project 17 26977411 27044304 + Ppard protein_coding retained_intron MGP_BALBcJ_T0046447.1 MGP_BALBcJ_G0023399.1 mouse_genomes_project 17 26977427 27047776 + Ppard protein_coding processed_transcript MGP_BALBcJ_T0046448.1 MGP_BALBcJ_G0023399.1 mouse_genomes_project 17 26977452 27047854 + Ppard protein_coding retained_intron MGP_BALBcJ_T0046449.1 MGP_BALBcJ_G0023399.1 mouse_genomes_project 17 27018909 27020365 + Ppard protein_coding processed_transcript MGP_BALBcJ_T0046450.1 MGP_BALBcJ_G0023399.1 mouse_genomes_project 17 27019394 27046631 + MGP_BALBcJ_P0046450 Ppard protein_coding protein_coding MGP_BALBcJ_T0010155.1 MGP_BALBcJ_G0008280.1 mouse_genomes_project 17 22303477 22303556 + Mir5125 miRNA miRNA MGP_BALBcJ_T0048679.1 MGP_BALBcJ_G0024055.1 mouse_genomes_project 17 87235673 87239425 - MGP_BALBcJ_P0048679 Atp6v1e2 protein_coding protein_coding MGP_BALBcJ_T0045966.1 MGP_BALBcJ_G0023286.1 mouse_genomes_project 17 23300561 23306713 + MGP_BALBcJ_P0045966 Msrb1 protein_coding protein_coding MGP_BALBcJ_T0045967.1 MGP_BALBcJ_G0023286.1 mouse_genomes_project 17 23300601 23306706 + MGP_BALBcJ_P0045967 Msrb1 protein_coding protein_coding MGP_BALBcJ_T0013270.1 MGP_BALBcJ_G0011367.1 mouse_genomes_project 17 76471654 76472101 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046399.1 MGP_BALBcJ_G0023388.1 mouse_genomes_project 17 26393582 26444912 + MGP_BALBcJ_P0046399 Pacsin1 protein_coding protein_coding MGP_BALBcJ_T0046400.1 MGP_BALBcJ_G0023388.1 mouse_genomes_project 17 26393661 26447355 + MGP_BALBcJ_P0046400 Pacsin1 protein_coding protein_coding MGP_BALBcJ_T0046401.1 MGP_BALBcJ_G0023388.1 mouse_genomes_project 17 26393716 26444928 + MGP_BALBcJ_P0046401 Pacsin1 protein_coding protein_coding MGP_BALBcJ_T0046402.1 MGP_BALBcJ_G0023388.1 mouse_genomes_project 17 26421033 26444912 + MGP_BALBcJ_P0046402 Pacsin1 protein_coding protein_coding MGP_BALBcJ_T0046403.1 MGP_BALBcJ_G0023388.1 mouse_genomes_project 17 26421063 26422107 + Pacsin1 protein_coding processed_transcript MGP_BALBcJ_T0011412.1 MGP_BALBcJ_G0009537.1 mouse_genomes_project 17 69692638 69692877 - Gm22967 misc_RNA misc_RNA MGP_BALBcJ_T0000981.1 MGP_BALBcJ_G0000909.1 mouse_genomes_project 17 51687534 51691726 - TEC TEC MGP_BALBcJ_T0101652.1 MGP_BALBcJ_G0039652.1 mouse_genomes_project 17 88465764 88471247 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101653.1 MGP_BALBcJ_G0039652.1 mouse_genomes_project 17 88470955 88471354 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0102361.1 MGP_BALBcJ_G0040177.1 mouse_genomes_project 17 37511112 37513862 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045805.1 MGP_BALBcJ_G0023245.1 mouse_genomes_project 17 22425998 22428069 + MGP_BALBcJ_P0045805 Dcpp1 protein_coding protein_coding MGP_BALBcJ_T0045803.1 MGP_BALBcJ_G0023244.1 mouse_genomes_project 17 22382407 22391488 + MGP_BALBcJ_P0045803 protein_coding protein_coding MGP_BALBcJ_T0045751.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22148647 22149678 - Thoc6 protein_coding retained_intron MGP_BALBcJ_T0045752.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22148651 22153904 - Thoc6 protein_coding retained_intron MGP_BALBcJ_T0045753.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22148651 22153944 - MGP_BALBcJ_P0045753 Thoc6 protein_coding protein_coding MGP_BALBcJ_T0045754.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22148651 22153904 - MGP_BALBcJ_P0045754 Thoc6 protein_coding protein_coding MGP_BALBcJ_T0045755.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22148830 22153667 - MGP_BALBcJ_P0045755 Thoc6 protein_coding protein_coding MGP_BALBcJ_T0045756.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22148830 22153891 - MGP_BALBcJ_P0045756 Thoc6 protein_coding protein_coding MGP_BALBcJ_T0045757.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22149234 22150543 - MGP_BALBcJ_P0045757 Thoc6 protein_coding protein_coding MGP_BALBcJ_T0045758.1 MGP_BALBcJ_G0023226.1 mouse_genomes_project 17 22150355 22153933 - MGP_BALBcJ_P0045758 Thoc6 protein_coding protein_coding MGP_BALBcJ_T0045528.1 MGP_BALBcJ_G0023127.1 mouse_genomes_project 17 10682720 10683457 - MGP_BALBcJ_P0045528 Gpr31b protein_coding protein_coding MGP_BALBcJ_T0099568.1 MGP_BALBcJ_G0037604.1 mouse_genomes_project 17 36711158 36711321 - Gm25104 snRNA snRNA MGP_BALBcJ_T0048498.1 MGP_BALBcJ_G0023978.1 mouse_genomes_project 17 73469573 73564612 - MGP_BALBcJ_P0048498 Capn13 protein_coding protein_coding MGP_BALBcJ_T0048259.1 MGP_BALBcJ_G0023895.1 mouse_genomes_project 17 56651261 56657748 + MGP_BALBcJ_P0048259 Ndufa11 protein_coding protein_coding MGP_BALBcJ_T0046709.1 MGP_BALBcJ_G0023457.1 mouse_genomes_project 17 30681911 30693194 - MGP_BALBcJ_P0046709 Sik1 protein_coding protein_coding MGP_BALBcJ_T0003751.1 MGP_BALBcJ_G0003374.1 mouse_genomes_project 17 44347275 44348456 + Runx2os3 antisense antisense MGP_BALBcJ_T0102320.1 MGP_BALBcJ_G0040136.1 mouse_genomes_project 17 33775359 33903507 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0099555.1 MGP_BALBcJ_G0037591.1 mouse_genomes_project 17 10421077 10421242 - Gm25730 snRNA snRNA MGP_BALBcJ_T0011413.1 MGP_BALBcJ_G0009538.1 mouse_genomes_project 17 76291382 76291490 - Gm26124 misc_RNA misc_RNA MGP_BALBcJ_T0013227.1 MGP_BALBcJ_G0011324.1 mouse_genomes_project 17 36113349 36116595 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047104.1 MGP_BALBcJ_G0023548.1 mouse_genomes_project 17 33659119 33661092 - Egfl8 protein_coding retained_intron MGP_BALBcJ_T0047105.1 MGP_BALBcJ_G0023548.1 mouse_genomes_project 17 33659120 33661743 - MGP_BALBcJ_P0047105 Egfl8 protein_coding protein_coding MGP_BALBcJ_T0047106.1 MGP_BALBcJ_G0023548.1 mouse_genomes_project 17 33659124 33661743 - MGP_BALBcJ_P0047106 Egfl8 protein_coding protein_coding MGP_BALBcJ_T0047107.1 MGP_BALBcJ_G0023548.1 mouse_genomes_project 17 33659547 33661560 - MGP_BALBcJ_P0047107 Egfl8 protein_coding protein_coding MGP_BALBcJ_T0047108.1 MGP_BALBcJ_G0023548.1 mouse_genomes_project 17 33659934 33661728 - Egfl8 protein_coding retained_intron MGP_BALBcJ_T0047109.1 MGP_BALBcJ_G0023548.1 mouse_genomes_project 17 33660539 33661093 - Egfl8 protein_coding retained_intron MGP_BALBcJ_T0006958.1 MGP_BALBcJ_G0005720.1 mouse_genomes_project 17 74759679 74802606 - Gm26749 lincRNA lincRNA MGP_BALBcJ_T0006916.1 MGP_BALBcJ_G0005690.1 mouse_genomes_project 17 32858901 32862175 + lincRNA lincRNA MGP_BALBcJ_T0102354.1 MGP_BALBcJ_G0040170.1 mouse_genomes_project 17 36846833 36847203 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0011415.1 MGP_BALBcJ_G0009540.1 mouse_genomes_project 17 85863271 85863359 + Gm27435 misc_RNA misc_RNA MGP_BALBcJ_T0047689.1 MGP_BALBcJ_G0023720.1 mouse_genomes_project 17 40373539 40378787 + MGP_BALBcJ_P0047689 protein_coding protein_coding MGP_BALBcJ_T0047330.1 MGP_BALBcJ_G0023593.1 mouse_genomes_project 17 34308840 34310705 + MGP_BALBcJ_P0047330 Ltb protein_coding protein_coding MGP_BALBcJ_T0047331.1 MGP_BALBcJ_G0023593.1 mouse_genomes_project 17 34308924 34310708 + Ltb protein_coding retained_intron MGP_BALBcJ_T0047332.1 MGP_BALBcJ_G0023593.1 mouse_genomes_project 17 34309027 34310723 + MGP_BALBcJ_P0047332 Ltb protein_coding protein_coding MGP_BALBcJ_T0047142.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33937618 33939754 + MGP_BALBcJ_P0047142 Dxo protein_coding protein_coding MGP_BALBcJ_T0047143.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33937618 33939801 + MGP_BALBcJ_P0047143 Dxo protein_coding protein_coding MGP_BALBcJ_T0047144.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33937618 33939216 + MGP_BALBcJ_P0047144 Dxo protein_coding protein_coding MGP_BALBcJ_T0047145.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33937681 33938959 + Dxo protein_coding retained_intron MGP_BALBcJ_T0047146.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33937847 33938577 + MGP_BALBcJ_P0047146 Dxo protein_coding protein_coding MGP_BALBcJ_T0047147.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33937998 33939705 + MGP_BALBcJ_P0047147 Dxo protein_coding protein_coding MGP_BALBcJ_T0047148.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33938256 33939706 + MGP_BALBcJ_P0047148 Dxo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047149.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33938592 33939251 + MGP_BALBcJ_P0047149 Dxo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047150.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33938894 33939705 + MGP_BALBcJ_P0047150 Dxo protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047151.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33938923 33939705 + MGP_BALBcJ_P0047151 Dxo protein_coding protein_coding MGP_BALBcJ_T0047152.1 MGP_BALBcJ_G0023557.1 mouse_genomes_project 17 33939043 33939691 + MGP_BALBcJ_P0047152 Dxo protein_coding protein_coding MGP_BALBcJ_T0013179.1 MGP_BALBcJ_G0011276.1 mouse_genomes_project 17 5859141 5863744 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102323.1 MGP_BALBcJ_G0040139.1 mouse_genomes_project 17 34293283 34297820 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048558.1 MGP_BALBcJ_G0024001.1 mouse_genomes_project 17 79050281 79051041 - protein_coding retained_intron MGP_BALBcJ_T0048581.1 MGP_BALBcJ_G0024009.1 mouse_genomes_project 17 79530921 79552050 - MGP_BALBcJ_P0048581 Cdc42ep3 protein_coding protein_coding MGP_BALBcJ_T0047724.1 MGP_BALBcJ_G0023739.1 mouse_genomes_project 17 43402823 43417797 - MGP_BALBcJ_P0047724 Tdrd6 protein_coding protein_coding MGP_BALBcJ_T0047725.1 MGP_BALBcJ_G0023739.1 mouse_genomes_project 17 43402827 43417797 - MGP_BALBcJ_P0047725 Tdrd6 protein_coding protein_coding MGP_BALBcJ_T0047726.1 MGP_BALBcJ_G0023739.1 mouse_genomes_project 17 43403047 43407974 - Tdrd6 protein_coding processed_transcript MGP_BALBcJ_T0047727.1 MGP_BALBcJ_G0023739.1 mouse_genomes_project 17 43403333 43417679 - MGP_BALBcJ_P0047727 Tdrd6 protein_coding unknown_likely_coding MGP_BALBcJ_T0045493.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10112257 10139631 - MGP_BALBcJ_P0045493 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045494.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10112293 10126046 - MGP_BALBcJ_P0045494 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045495.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10112293 10125926 - MGP_BALBcJ_P0045495 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045496.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10112293 10126046 - MGP_BALBcJ_P0045496 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045497.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10112293 10119306 - MGP_BALBcJ_P0045497 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045498.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10113382 10123493 - MGP_BALBcJ_P0045498 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045499.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10113485 10123479 - MGP_BALBcJ_P0045499 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045500.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10113496 10123493 - MGP_BALBcJ_P0045500 Mas1 protein_coding protein_coding MGP_BALBcJ_T0045501.1 MGP_BALBcJ_G0023118.1 mouse_genomes_project 17 10113639 10126601 - MGP_BALBcJ_P0045501 Mas1 protein_coding protein_coding MGP_BALBcJ_T0101651.1 MGP_BALBcJ_G0039651.1 mouse_genomes_project 17 70980620 70981436 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0045653.1 MGP_BALBcJ_G0023171.1 mouse_genomes_project 17 18276770 18304701 - MGP_BALBcJ_P0045653 Vmn2r105 protein_coding protein_coding MGP_BALBcJ_T0045555.1 MGP_BALBcJ_G0023130.1 mouse_genomes_project 17 11315955 11318196 + MGP_BALBcJ_P0045555 Gm7168 protein_coding protein_coding MGP_BALBcJ_T0047629.1 MGP_BALBcJ_G0023669.1 mouse_genomes_project 17 36676211 36677332 - MGP_BALBcJ_P0047629 Olfr97 protein_coding protein_coding MGP_BALBcJ_T0046845.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32561506 32602059 - MGP_BALBcJ_P0046845 Hnrnpm protein_coding protein_coding MGP_BALBcJ_T0046846.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32561508 32600594 - MGP_BALBcJ_P0046846 Hnrnpm protein_coding protein_coding MGP_BALBcJ_T0046847.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32561509 32600590 - MGP_BALBcJ_P0046847 Hnrnpm protein_coding protein_coding MGP_BALBcJ_T0046848.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32561512 32575496 - MGP_BALBcJ_P0046848 Hnrnpm protein_coding protein_coding MGP_BALBcJ_T0046849.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32561512 32600590 - MGP_BALBcJ_P0046849 Hnrnpm protein_coding protein_coding MGP_BALBcJ_T0046850.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32565531 32581768 - MGP_BALBcJ_P0046850 Hnrnpm protein_coding protein_coding MGP_BALBcJ_T0046851.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32583835 32600587 - Hnrnpm protein_coding retained_intron MGP_BALBcJ_T0046852.1 MGP_BALBcJ_G0023496.1 mouse_genomes_project 17 32592137 32600603 - Hnrnpm protein_coding retained_intron MGP_BALBcJ_T0046507.1 MGP_BALBcJ_G0023410.1 mouse_genomes_project 17 27408814 27456076 - MGP_BALBcJ_P0046507 Slc26a8 protein_coding unknown_likely_coding MGP_BALBcJ_T0046508.1 MGP_BALBcJ_G0023410.1 mouse_genomes_project 17 27408814 27456459 - MGP_BALBcJ_P0046508 Slc26a8 protein_coding protein_coding MGP_BALBcJ_T0046509.1 MGP_BALBcJ_G0023410.1 mouse_genomes_project 17 27420697 27461339 - Slc26a8 protein_coding retained_intron MGP_BALBcJ_T0003775.1 MGP_BALBcJ_G0003394.1 mouse_genomes_project 17 87673225 87676067 - 0610012D04Rik antisense antisense MGP_BALBcJ_T0013245.1 MGP_BALBcJ_G0011342.1 mouse_genomes_project 17 47886604 47886798 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099559.1 MGP_BALBcJ_G0037595.1 mouse_genomes_project 17 22897724 22897831 - Gm25618 snRNA snRNA MGP_BALBcJ_T0047270.1 MGP_BALBcJ_G0023580.1 mouse_genomes_project 17 34187323 34188789 + MGP_BALBcJ_P0047270 Ly6g6e protein_coding protein_coding MGP_BALBcJ_T0047271.1 MGP_BALBcJ_G0023580.1 mouse_genomes_project 17 34187352 34189045 + MGP_BALBcJ_P0047271 Ly6g6e protein_coding protein_coding MGP_BALBcJ_T0047272.1 MGP_BALBcJ_G0023580.1 mouse_genomes_project 17 34187358 34189295 + MGP_BALBcJ_P0047272 Ly6g6e protein_coding protein_coding MGP_BALBcJ_T0047273.1 MGP_BALBcJ_G0023580.1 mouse_genomes_project 17 34187580 34188780 + MGP_BALBcJ_P0047273 Ly6g6e protein_coding protein_coding MGP_BALBcJ_T0000983.1 MGP_BALBcJ_G0000911.1 mouse_genomes_project 17 51721455 51723441 - TEC TEC MGP_BALBcJ_T0048680.1 MGP_BALBcJ_G0024056.1 mouse_genomes_project 17 87255144 87292565 + MGP_BALBcJ_P0048680 Rhoq protein_coding protein_coding MGP_BALBcJ_T0048681.1 MGP_BALBcJ_G0024056.1 mouse_genomes_project 17 87255354 87287594 + MGP_BALBcJ_P0048681 Rhoq protein_coding protein_coding MGP_BALBcJ_T0098541.1 MGP_BALBcJ_G0036595.1 mouse_genomes_project 17 63135581 63135692 - Gm25348 rRNA rRNA MGP_BALBcJ_T0046489.1 MGP_BALBcJ_G0023404.1 mouse_genomes_project 17 27150807 27240328 - MGP_BALBcJ_P0046489 Fkbp5 protein_coding protein_coding MGP_BALBcJ_T0046490.1 MGP_BALBcJ_G0023404.1 mouse_genomes_project 17 27150809 27272573 - MGP_BALBcJ_P0046490 Fkbp5 protein_coding protein_coding MGP_BALBcJ_T0046491.1 MGP_BALBcJ_G0023404.1 mouse_genomes_project 17 27150817 27242182 - MGP_BALBcJ_P0046491 Fkbp5 protein_coding protein_coding MGP_BALBcJ_T0046492.1 MGP_BALBcJ_G0023404.1 mouse_genomes_project 17 27154995 27181393 - Fkbp5 protein_coding processed_transcript MGP_BALBcJ_T0046493.1 MGP_BALBcJ_G0023404.1 mouse_genomes_project 17 27168723 27194494 - MGP_BALBcJ_P0046493 Fkbp5 protein_coding protein_coding MGP_BALBcJ_T0046494.1 MGP_BALBcJ_G0023404.1 mouse_genomes_project 17 27251410 27261451 - Fkbp5 protein_coding retained_intron MGP_BALBcJ_T0047711.1 MGP_BALBcJ_G0023735.1 mouse_genomes_project 17 43165430 43241585 + MGP_BALBcJ_P0047711 Adgrf5 protein_coding unknown_likely_coding MGP_BALBcJ_T0047712.1 MGP_BALBcJ_G0023735.1 mouse_genomes_project 17 43165454 43241583 + MGP_BALBcJ_P0047712 Adgrf5 protein_coding protein_coding MGP_BALBcJ_T0006874.1 MGP_BALBcJ_G0005657.1 mouse_genomes_project 17 7605391 7610094 + 1700110C19Rik lincRNA lincRNA MGP_BALBcJ_T0006875.1 MGP_BALBcJ_G0005657.1 mouse_genomes_project 17 7605391 7610094 + 1700110C19Rik lincRNA lincRNA MGP_BALBcJ_T0045802.1 MGP_BALBcJ_G0023243.1 mouse_genomes_project 17 22361938 22391464 + MGP_BALBcJ_P0045802 protein_coding protein_coding MGP_BALBcJ_T0045804.1 MGP_BALBcJ_G0023243.1 mouse_genomes_project 17 22382408 22391487 + MGP_BALBcJ_P0045804 protein_coding protein_coding MGP_BALBcJ_T0045726.1 MGP_BALBcJ_G0023216.1 mouse_genomes_project 17 21433315 21520009 + MGP_BALBcJ_P0045726 protein_coding protein_coding MGP_BALBcJ_T0047551.1 MGP_BALBcJ_G0023644.1 mouse_genomes_project 17 36028426 36030638 - MGP_BALBcJ_P0047551 H2-M1 protein_coding protein_coding MGP_BALBcJ_T0048389.1 MGP_BALBcJ_G0023949.1 mouse_genomes_project 17 66760423 67460289 - MGP_BALBcJ_P0048389 Ptprm protein_coding protein_coding MGP_BALBcJ_T0048390.1 MGP_BALBcJ_G0023949.1 mouse_genomes_project 17 66906671 67459859 - MGP_BALBcJ_P0048390 Ptprm protein_coding unknown_likely_coding MGP_BALBcJ_T0102307.1 MGP_BALBcJ_G0040123.1 mouse_genomes_project 17 29732933 29734955 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0017541.1 MGP_BALBcJ_G0015290.1 mouse_genomes_project 17 36691775 36693784 + processed_transcript retained_intron MGP_BALBcJ_T0006905.1 MGP_BALBcJ_G0005683.1 mouse_genomes_project 17 27907735 27927013 + Gm16194 lincRNA lincRNA MGP_BALBcJ_T0006906.1 MGP_BALBcJ_G0005683.1 mouse_genomes_project 17 27907760 27927019 + Gm16194 lincRNA lincRNA MGP_BALBcJ_T0006907.1 MGP_BALBcJ_G0005683.1 mouse_genomes_project 17 27907771 27914525 + Gm16194 lincRNA lincRNA MGP_BALBcJ_T0006908.1 MGP_BALBcJ_G0005683.1 mouse_genomes_project 17 27907789 27927131 + Gm16194 lincRNA lincRNA MGP_BALBcJ_T0045663.1 MGP_BALBcJ_G0023181.1 mouse_genomes_project 17 18908791 18909712 + MGP_BALBcJ_P0045663 Vmn1r229 protein_coding protein_coding MGP_BALBcJ_T0046365.1 MGP_BALBcJ_G0023380.1 mouse_genomes_project 17 25831456 25855037 - MGP_BALBcJ_P0046365 Ip6k3 protein_coding protein_coding MGP_BALBcJ_T0010163.1 MGP_BALBcJ_G0008288.1 mouse_genomes_project 17 24432340 24432404 - Mir3082 miRNA miRNA MGP_BALBcJ_T0102355.1 MGP_BALBcJ_G0040171.1 mouse_genomes_project 17 36852105 36853032 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047697.1 MGP_BALBcJ_G0023724.1 mouse_genomes_project 17 40662900 40667969 - MGP_BALBcJ_P0047697 9130008F23Rik protein_coding protein_coding MGP_BALBcJ_T0048746.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90341869 91427595 - MGP_BALBcJ_P0048746 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048747.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90341882 91432210 - MGP_BALBcJ_P0048747 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048748.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90343651 90398491 - MGP_BALBcJ_P0048748 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048749.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90343653 91427603 - MGP_BALBcJ_P0048749 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048750.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90344049 90779702 - MGP_BALBcJ_P0048750 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048751.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90344519 90398495 - MGP_BALBcJ_P0048751 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048752.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90344546 90779716 - MGP_BALBcJ_P0048752 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048753.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90344919 91427414 - MGP_BALBcJ_P0048753 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048754.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90345103 90398235 - Nrxn1 protein_coding processed_transcript MGP_BALBcJ_T0048755.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90345126 91427414 - MGP_BALBcJ_P0048755 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048756.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90345142 90779780 - MGP_BALBcJ_P0048756 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048757.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90345142 91431872 - MGP_BALBcJ_P0048757 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048758.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90345569 90518761 - MGP_BALBcJ_P0048758 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048759.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90466099 91029380 - MGP_BALBcJ_P0048759 Nrxn1 protein_coding unknown_likely_coding MGP_BALBcJ_T0048760.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90474643 90666348 - Nrxn1 protein_coding processed_transcript MGP_BALBcJ_T0048761.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90518626 91431942 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0048762.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90518626 90778656 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0048763.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90682553 90912910 - MGP_BALBcJ_P0048763 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048764.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90682794 90913059 - MGP_BALBcJ_P0048764 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048765.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90777636 90780403 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0048766.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90860675 91427171 - Nrxn1 protein_coding processed_transcript MGP_BALBcJ_T0048767.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90914474 90953486 - MGP_BALBcJ_P0048767 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048768.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90914752 91025480 - MGP_BALBcJ_P0048768 Nrxn1 protein_coding protein_coding MGP_BALBcJ_T0048769.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 90942975 90953289 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0048770.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 91024636 91431910 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0048771.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 91027882 91431930 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0048772.1 MGP_BALBcJ_G0024076.1 mouse_genomes_project 17 91424145 91431892 - Nrxn1 protein_coding retained_intron MGP_BALBcJ_T0000990.1 MGP_BALBcJ_G0000918.1 mouse_genomes_project 17 71477809 71480601 - TEC TEC MGP_BALBcJ_T0048085.1 MGP_BALBcJ_G0023836.1 mouse_genomes_project 17 48350656 48354202 - Tspo2 protein_coding retained_intron MGP_BALBcJ_T0048086.1 MGP_BALBcJ_G0023836.1 mouse_genomes_project 17 48351137 48354232 - MGP_BALBcJ_P0048086 Tspo2 protein_coding protein_coding MGP_BALBcJ_T0048087.1 MGP_BALBcJ_G0023836.1 mouse_genomes_project 17 48351221 48352784 - MGP_BALBcJ_P0048087 Tspo2 protein_coding protein_coding MGP_BALBcJ_T0048088.1 MGP_BALBcJ_G0023836.1 mouse_genomes_project 17 48351270 48352781 - MGP_BALBcJ_P0048088 Tspo2 protein_coding protein_coding MGP_BALBcJ_T0048089.1 MGP_BALBcJ_G0023836.1 mouse_genomes_project 17 48352646 48354227 - Tspo2 protein_coding processed_transcript MGP_BALBcJ_T0102277.1 MGP_BALBcJ_G0040093.1 mouse_genomes_project 17 16393577 16412614 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010182.1 MGP_BALBcJ_G0008307.1 mouse_genomes_project 17 33942380 33942443 - Mir6971 miRNA miRNA MGP_BALBcJ_T0048397.1 MGP_BALBcJ_G0023953.1 mouse_genomes_project 17 68394782 68570638 + L3mbtl4 protein_coding retained_intron MGP_BALBcJ_T0048398.1 MGP_BALBcJ_G0023953.1 mouse_genomes_project 17 68394782 68737371 + MGP_BALBcJ_P0048398 L3mbtl4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048399.1 MGP_BALBcJ_G0023953.1 mouse_genomes_project 17 68394782 68748392 + MGP_BALBcJ_P0048399 L3mbtl4 protein_coding protein_coding MGP_BALBcJ_T0048400.1 MGP_BALBcJ_G0023953.1 mouse_genomes_project 17 68394782 68880349 + MGP_BALBcJ_P0048400 L3mbtl4 protein_coding protein_coding MGP_BALBcJ_T0101872.1 MGP_BALBcJ_G0039779.1 mouse_genomes_project 17 71647207 71703074 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101873.1 MGP_BALBcJ_G0039779.1 mouse_genomes_project 17 71649383 71667084 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0048588.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80257222 80290767 - MGP_BALBcJ_P0048588 Hnrnpll protein_coding protein_coding MGP_BALBcJ_T0048589.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80257222 80290660 - MGP_BALBcJ_P0048589 Hnrnpll protein_coding protein_coding MGP_BALBcJ_T0048590.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80257572 80290660 - MGP_BALBcJ_P0048590 Hnrnpll protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048591.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80258076 80263292 - Hnrnpll protein_coding retained_intron MGP_BALBcJ_T0048592.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80265080 80290627 - Hnrnpll protein_coding retained_intron MGP_BALBcJ_T0048593.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80272735 80290568 - Hnrnpll protein_coding retained_intron MGP_BALBcJ_T0048594.1 MGP_BALBcJ_G0024014.1 mouse_genomes_project 17 80278921 80290701 - Hnrnpll protein_coding retained_intron MGP_BALBcJ_T0048257.1 MGP_BALBcJ_G0023894.1 mouse_genomes_project 17 56647428 56651199 - MGP_BALBcJ_P0048257 Vmac protein_coding protein_coding MGP_BALBcJ_T0048258.1 MGP_BALBcJ_G0023894.1 mouse_genomes_project 17 56647428 56650421 - MGP_BALBcJ_P0048258 Vmac protein_coding protein_coding MGP_BALBcJ_T0048645.1 MGP_BALBcJ_G0024041.1 mouse_genomes_project 17 84897978 84923030 - MGP_BALBcJ_P0048645 Abcg5 protein_coding protein_coding MGP_BALBcJ_T0048646.1 MGP_BALBcJ_G0024041.1 mouse_genomes_project 17 84898232 84922221 - MGP_BALBcJ_P0048646 Abcg5 protein_coding protein_coding MGP_BALBcJ_T0048647.1 MGP_BALBcJ_G0024041.1 mouse_genomes_project 17 84909844 84914298 - Abcg5 protein_coding processed_transcript MGP_BALBcJ_T0048648.1 MGP_BALBcJ_G0024041.1 mouse_genomes_project 17 84910322 84916386 - Abcg5 protein_coding retained_intron MGP_BALBcJ_T0013252.1 MGP_BALBcJ_G0011349.1 mouse_genomes_project 17 53649349 53650350 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046291.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867128 24898664 + MGP_BALBcJ_P0046291 Luc7l protein_coding protein_coding MGP_BALBcJ_T0046292.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867169 24903363 + MGP_BALBcJ_P0046292 Luc7l protein_coding protein_coding MGP_BALBcJ_T0046293.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867174 24895760 + MGP_BALBcJ_P0046293 Luc7l protein_coding protein_coding MGP_BALBcJ_T0046294.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867184 24899843 + MGP_BALBcJ_P0046294 Luc7l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046295.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867184 24899841 + MGP_BALBcJ_P0046295 Luc7l protein_coding protein_coding MGP_BALBcJ_T0046296.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867202 24898665 + Luc7l protein_coding retained_intron MGP_BALBcJ_T0046297.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867217 24898668 + MGP_BALBcJ_P0046297 Luc7l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046298.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867440 24882597 + MGP_BALBcJ_P0046298 Luc7l protein_coding protein_coding MGP_BALBcJ_T0046299.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24867603 24868472 + Luc7l protein_coding processed_transcript MGP_BALBcJ_T0046300.1 MGP_BALBcJ_G0023361.1 mouse_genomes_project 17 24883478 24899819 + MGP_BALBcJ_P0046300 Luc7l protein_coding protein_coding MGP_BALBcJ_T0048721.1 MGP_BALBcJ_G0024069.1 mouse_genomes_project 17 88326584 88402193 - MGP_BALBcJ_P0048721 Fbxo11 protein_coding protein_coding MGP_BALBcJ_T0048722.1 MGP_BALBcJ_G0024069.1 mouse_genomes_project 17 88326584 88403705 - MGP_BALBcJ_P0048722 Fbxo11 protein_coding protein_coding MGP_BALBcJ_T0048723.1 MGP_BALBcJ_G0024069.1 mouse_genomes_project 17 88327143 88344907 - MGP_BALBcJ_P0048723 Fbxo11 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048724.1 MGP_BALBcJ_G0024069.1 mouse_genomes_project 17 88328938 88336711 - Fbxo11 protein_coding retained_intron MGP_BALBcJ_T0045686.1 MGP_BALBcJ_G0023195.1 mouse_genomes_project 17 19664714 19688454 + MGP_BALBcJ_P0045686 Zfp53 protein_coding unknown_likely_coding MGP_BALBcJ_T0048513.1 MGP_BALBcJ_G0023989.1 mouse_genomes_project 17 74672333 74683719 + MGP_BALBcJ_P0048513 Yipf4 protein_coding protein_coding MGP_BALBcJ_T0045487.1 MGP_BALBcJ_G0023114.1 mouse_genomes_project 17 9686960 9774213 - MGP_BALBcJ_P0045487 Slc22a3 protein_coding protein_coding MGP_BALBcJ_T0048474.1 MGP_BALBcJ_G0023968.1 mouse_genomes_project 17 71607240 71672338 - MGP_BALBcJ_P0048474 Ndc80 protein_coding protein_coding MGP_BALBcJ_T0045709.1 MGP_BALBcJ_G0023209.1 mouse_genomes_project 17 20624286 20647565 - MGP_BALBcJ_P0045709 Zfp944 protein_coding protein_coding MGP_BALBcJ_T0099585.1 MGP_BALBcJ_G0037621.1 mouse_genomes_project 17 80333422 80333528 + Gm23125 snRNA snRNA MGP_BALBcJ_T0045452.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 5818987 6209561 + MGP_BALBcJ_P0045452 Pde10a protein_coding protein_coding MGP_BALBcJ_T0045453.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 5820890 6268121 + MGP_BALBcJ_P0045453 Pde10a protein_coding protein_coding MGP_BALBcJ_T0045456.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 6090853 6187179 + Pde10a protein_coding retained_intron MGP_BALBcJ_T0045457.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 6090939 6272270 + MGP_BALBcJ_P0045457 Pde10a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045458.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 6091239 6272278 + MGP_BALBcJ_P0045458 Pde10a protein_coding protein_coding MGP_BALBcJ_T0045459.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 6138794 6268025 + MGP_BALBcJ_P0045459 Pde10a protein_coding protein_coding MGP_BALBcJ_T0045460.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 6181280 6216667 + Pde10a protein_coding processed_transcript MGP_BALBcJ_T0045461.1 MGP_BALBcJ_G0023104.1 mouse_genomes_project 17 6210277 6269913 + MGP_BALBcJ_P0045461 Pde10a protein_coding protein_coding MGP_BALBcJ_T0047369.1 MGP_BALBcJ_G0023603.1 mouse_genomes_project 17 34733287 34734734 + MGP_BALBcJ_P0047369 Psors1c2 protein_coding protein_coding MGP_BALBcJ_T0010198.1 MGP_BALBcJ_G0008323.1 mouse_genomes_project 17 56342574 56342638 - Mir6977 miRNA miRNA MGP_BALBcJ_T0046163.1 MGP_BALBcJ_G0023335.1 mouse_genomes_project 17 24424604 24429706 + MGP_BALBcJ_P0046163 Wdr24 protein_coding protein_coding MGP_BALBcJ_T0046164.1 MGP_BALBcJ_G0023335.1 mouse_genomes_project 17 24424626 24429697 + Wdr24 protein_coding retained_intron MGP_BALBcJ_T0046165.1 MGP_BALBcJ_G0023335.1 mouse_genomes_project 17 24425507 24426649 + Wdr24 protein_coding processed_transcript MGP_BALBcJ_T0046166.1 MGP_BALBcJ_G0023335.1 mouse_genomes_project 17 24425639 24427322 + Wdr24 protein_coding retained_intron MGP_BALBcJ_T0045977.1 MGP_BALBcJ_G0023292.1 mouse_genomes_project 17 23445349 23449077 - MGP_BALBcJ_P0045977 Nubp2 protein_coding protein_coding MGP_BALBcJ_T0045878.1 MGP_BALBcJ_G0023262.1 mouse_genomes_project 17 22949496 22961595 + MGP_BALBcJ_P0045878 Rnps1 protein_coding protein_coding MGP_BALBcJ_T0045879.1 MGP_BALBcJ_G0023262.1 mouse_genomes_project 17 22949496 22961595 + MGP_BALBcJ_P0045879 Rnps1 protein_coding protein_coding MGP_BALBcJ_T0045880.1 MGP_BALBcJ_G0023262.1 mouse_genomes_project 17 22949496 22961595 + MGP_BALBcJ_P0045880 Rnps1 protein_coding protein_coding MGP_BALBcJ_T0048613.1 MGP_BALBcJ_G0024027.1 mouse_genomes_project 17 81189249 81245858 + MGP_BALBcJ_P0048613 Tmem178 protein_coding protein_coding MGP_BALBcJ_T0010208.1 MGP_BALBcJ_G0008333.1 mouse_genomes_project 17 91427093 91427238 + miRNA miRNA MGP_BALBcJ_T0047685.1 MGP_BALBcJ_G0023716.1 mouse_genomes_project 17 40265874 40278674 + MGP_BALBcJ_P0047685 Esp8 protein_coding protein_coding MGP_BALBcJ_T0048168.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55912081 55918290 + MGP_BALBcJ_P0048168 Mpnd protein_coding protein_coding MGP_BALBcJ_T0048169.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55915566 55923578 + MGP_BALBcJ_P0048169 Mpnd protein_coding protein_coding MGP_BALBcJ_T0048170.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55915573 55923434 + MGP_BALBcJ_P0048170 Mpnd protein_coding protein_coding MGP_BALBcJ_T0048171.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55915596 55923441 + MGP_BALBcJ_P0048171 Mpnd protein_coding protein_coding MGP_BALBcJ_T0048172.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55915620 55918688 + Mpnd protein_coding retained_intron MGP_BALBcJ_T0048173.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55915698 55923402 + MGP_BALBcJ_P0048173 Mpnd protein_coding protein_coding MGP_BALBcJ_T0048174.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55916298 55918033 + Mpnd protein_coding retained_intron MGP_BALBcJ_T0048175.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55916805 55922285 + MGP_BALBcJ_P0048175 Mpnd protein_coding protein_coding MGP_BALBcJ_T0048176.1 MGP_BALBcJ_G0023868.1 mouse_genomes_project 17 55918308 55921910 + Mpnd protein_coding retained_intron MGP_BALBcJ_T0045833.1 MGP_BALBcJ_G0023254.1 mouse_genomes_project 17 22683706 22693330 - Amdhd2 protein_coding retained_intron MGP_BALBcJ_T0045834.1 MGP_BALBcJ_G0023254.1 mouse_genomes_project 17 22683706 22684613 - Amdhd2 protein_coding processed_transcript MGP_BALBcJ_T0045835.1 MGP_BALBcJ_G0023254.1 mouse_genomes_project 17 22683706 22693366 - MGP_BALBcJ_P0045835 Amdhd2 protein_coding protein_coding MGP_BALBcJ_T0045836.1 MGP_BALBcJ_G0023254.1 mouse_genomes_project 17 22683708 22685466 - MGP_BALBcJ_P0045836 Amdhd2 protein_coding protein_coding MGP_BALBcJ_T0045837.1 MGP_BALBcJ_G0023254.1 mouse_genomes_project 17 22686215 22692910 - MGP_BALBcJ_P0045837 Amdhd2 protein_coding protein_coding MGP_BALBcJ_T0045838.1 MGP_BALBcJ_G0023254.1 mouse_genomes_project 17 22691811 22693293 - Amdhd2 protein_coding retained_intron MGP_BALBcJ_T0102313.1 MGP_BALBcJ_G0040129.1 mouse_genomes_project 17 33049870 33051025 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045556.1 MGP_BALBcJ_G0023131.1 mouse_genomes_project 17 11655949 11666440 - MGP_BALBcJ_P0045556 Dact2 protein_coding protein_coding MGP_BALBcJ_T0102333.1 MGP_BALBcJ_G0040149.1 mouse_genomes_project 17 35510231 35516908 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0100832.1 MGP_BALBcJ_G0038868.1 mouse_genomes_project 17 28794435 28794543 - Gm22327 snoRNA snoRNA MGP_BALBcJ_T0102300.1 MGP_BALBcJ_G0040116.1 mouse_genomes_project 17 21415395 21418346 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048384.1 MGP_BALBcJ_G0023947.1 mouse_genomes_project 17 66588720 66613777 - MGP_BALBcJ_P0048384 Rab12 protein_coding protein_coding MGP_BALBcJ_T0048385.1 MGP_BALBcJ_G0023947.1 mouse_genomes_project 17 66591699 66594529 - Rab12 protein_coding retained_intron MGP_BALBcJ_T0048386.1 MGP_BALBcJ_G0023947.1 mouse_genomes_project 17 66594558 66613440 - Rab12 protein_coding processed_transcript MGP_BALBcJ_T0048387.1 MGP_BALBcJ_G0023947.1 mouse_genomes_project 17 66599927 66613773 - Rab12 protein_coding retained_intron MGP_BALBcJ_T0045436.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613679 5630001 + Sft2d1 protein_coding retained_intron MGP_BALBcJ_T0045437.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613679 5630001 + MGP_BALBcJ_P0045437 Sft2d1 protein_coding protein_coding MGP_BALBcJ_T0045438.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613686 5692419 + Sft2d1 protein_coding processed_transcript MGP_BALBcJ_T0045439.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613699 5629615 + MGP_BALBcJ_P0045439 Sft2d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045440.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613716 5629568 + Sft2d1 protein_coding processed_transcript MGP_BALBcJ_T0045441.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613746 5629999 + MGP_BALBcJ_P0045441 Sft2d1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045442.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5613752 5620782 + Sft2d1 protein_coding retained_intron MGP_BALBcJ_T0045444.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5621302 5627011 + Sft2d1 protein_coding retained_intron MGP_BALBcJ_T0045445.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5623121 5629622 + Sft2d1 protein_coding retained_intron MGP_BALBcJ_T0045446.1 MGP_BALBcJ_G0023100.1 mouse_genomes_project 17 5626933 5629999 + Sft2d1 protein_coding retained_intron MGP_BALBcJ_T0046367.1 MGP_BALBcJ_G0023382.1 mouse_genomes_project 17 26142137 26224540 - MGP_BALBcJ_P0046367 Grm4 protein_coding protein_coding MGP_BALBcJ_T0046368.1 MGP_BALBcJ_G0023382.1 mouse_genomes_project 17 26145657 26234599 - MGP_BALBcJ_P0046368 Grm4 protein_coding protein_coding MGP_BALBcJ_T0046369.1 MGP_BALBcJ_G0023382.1 mouse_genomes_project 17 26169940 26192190 - Grm4 protein_coding retained_intron MGP_BALBcJ_T0046370.1 MGP_BALBcJ_G0023382.1 mouse_genomes_project 17 26171412 26191941 - Grm4 protein_coding processed_transcript MGP_BALBcJ_T0047274.1 MGP_BALBcJ_G0023581.1 mouse_genomes_project 17 34190932 34196329 - MGP_BALBcJ_P0047274 Ly6g6f protein_coding protein_coding MGP_BALBcJ_T0048082.1 MGP_BALBcJ_G0023834.1 mouse_genomes_project 17 48312022 48319106 + MGP_BALBcJ_P0048082 Oard1 protein_coding protein_coding MGP_BALBcJ_T0048083.1 MGP_BALBcJ_G0023834.1 mouse_genomes_project 17 48312088 48319118 + MGP_BALBcJ_P0048083 Oard1 protein_coding protein_coding MGP_BALBcJ_T0101869.1 MGP_BALBcJ_G0039778.1 mouse_genomes_project 17 33487637 33495605 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101870.1 MGP_BALBcJ_G0039778.1 mouse_genomes_project 17 33492077 33493812 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101871.1 MGP_BALBcJ_G0039778.1 mouse_genomes_project 17 33495522 33497025 - transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0045764.1 MGP_BALBcJ_G0023229.1 mouse_genomes_project 17 22159425 22162512 + MGP_BALBcJ_P0045764 Cldn6 protein_coding protein_coding MGP_BALBcJ_T0047973.1 MGP_BALBcJ_G0023808.1 mouse_genomes_project 17 47346821 47361249 - MGP_BALBcJ_P0047973 Taf8 protein_coding protein_coding MGP_BALBcJ_T0047638.1 MGP_BALBcJ_G0023677.1 mouse_genomes_project 17 36927150 36928095 + MGP_BALBcJ_P0047638 Olfr109 protein_coding protein_coding MGP_BALBcJ_T0047006.1 MGP_BALBcJ_G0023524.1 mouse_genomes_project 17 33089926 33106237 + MGP_BALBcJ_P0047006 H2-DMa protein_coding unknown_likely_coding MGP_BALBcJ_T0047007.1 MGP_BALBcJ_G0023524.1 mouse_genomes_project 17 33104177 33105330 + H2-DMa protein_coding retained_intron MGP_BALBcJ_T0048310.1 MGP_BALBcJ_G0023923.1 mouse_genomes_project 17 57472023 57507438 - MGP_BALBcJ_P0048310 Vmn2r120 protein_coding protein_coding MGP_BALBcJ_T0046789.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31821690 31844353 - MGP_BALBcJ_P0046789 Cyp4f13 protein_coding protein_coding MGP_BALBcJ_T0046790.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31821703 31844330 - MGP_BALBcJ_P0046790 Cyp4f13 protein_coding protein_coding MGP_BALBcJ_T0046791.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31821718 31844317 - MGP_BALBcJ_P0046791 Cyp4f13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046792.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31822334 31822888 - Cyp4f13 protein_coding retained_intron MGP_BALBcJ_T0046793.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31829436 31844353 - MGP_BALBcJ_P0046793 Cyp4f13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046794.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31829648 31844311 - MGP_BALBcJ_P0046794 Cyp4f13 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046795.1 MGP_BALBcJ_G0023479.1 mouse_genomes_project 17 31836776 31844342 - Cyp4f13 protein_coding retained_intron MGP_BALBcJ_T0003770.1 MGP_BALBcJ_G0003389.1 mouse_genomes_project 17 70957211 70981089 + Gm28727 antisense antisense MGP_BALBcJ_T0048668.1 MGP_BALBcJ_G0024049.1 mouse_genomes_project 17 85940073 85944033 - MGP_BALBcJ_P0048668 Six2 protein_coding protein_coding MGP_BALBcJ_T0045939.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23246287 23250592 + MGP_BALBcJ_P0045939 Noxo1 protein_coding protein_coding MGP_BALBcJ_T0045941.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248085 23248418 + Noxo1 protein_coding processed_transcript MGP_BALBcJ_T0045942.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248238 23249465 + Noxo1 protein_coding processed_transcript MGP_BALBcJ_T0045943.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248295 23250588 + Noxo1 protein_coding retained_intron MGP_BALBcJ_T0045944.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248301 23250376 + Noxo1 protein_coding retained_intron MGP_BALBcJ_T0045945.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248374 23249229 + Noxo1 protein_coding retained_intron MGP_BALBcJ_T0045946.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248403 23249741 + Noxo1 protein_coding processed_transcript MGP_BALBcJ_T0045947.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23248588 23250587 + Noxo1 protein_coding processed_transcript MGP_BALBcJ_T0045948.1 MGP_BALBcJ_G0023280.1 mouse_genomes_project 17 23249455 23250579 + Noxo1 protein_coding processed_transcript MGP_BALBcJ_T0003762.1 MGP_BALBcJ_G0003383.1 mouse_genomes_project 17 52500417 52510327 - Gm27217 antisense antisense MGP_BALBcJ_T0006897.1 MGP_BALBcJ_G0005676.1 mouse_genomes_project 17 26046989 26049355 + Gm10505 lincRNA lincRNA MGP_BALBcJ_T0045564.1 MGP_BALBcJ_G0023136.1 mouse_genomes_project 17 12420454 12436663 - MGP_BALBcJ_P0045564 Phf10 protein_coding protein_coding MGP_BALBcJ_T0045565.1 MGP_BALBcJ_G0023136.1 mouse_genomes_project 17 12420459 12422274 - Phf10 protein_coding retained_intron MGP_BALBcJ_T0045566.1 MGP_BALBcJ_G0023136.1 mouse_genomes_project 17 12422011 12428152 - Phf10 protein_coding retained_intron MGP_BALBcJ_T0045567.1 MGP_BALBcJ_G0023136.1 mouse_genomes_project 17 12423183 12436663 - MGP_BALBcJ_P0045567 Phf10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045568.1 MGP_BALBcJ_G0023136.1 mouse_genomes_project 17 12431144 12434961 - Phf10 protein_coding retained_intron MGP_BALBcJ_T0006883.1 MGP_BALBcJ_G0005664.1 mouse_genomes_project 17 14971626 14977168 - Gm26873 lincRNA lincRNA MGP_BALBcJ_T0048211.1 MGP_BALBcJ_G0023884.1 mouse_genomes_project 17 56246939 56279408 + MGP_BALBcJ_P0048211 Kdm4b protein_coding protein_coding MGP_BALBcJ_T0048212.1 MGP_BALBcJ_G0023884.1 mouse_genomes_project 17 56246951 56326601 + MGP_BALBcJ_P0048212 Kdm4b protein_coding protein_coding MGP_BALBcJ_T0048213.1 MGP_BALBcJ_G0023884.1 mouse_genomes_project 17 56246968 56326596 + MGP_BALBcJ_P0048213 Kdm4b protein_coding protein_coding MGP_BALBcJ_T0048214.1 MGP_BALBcJ_G0023884.1 mouse_genomes_project 17 56295981 56309823 + Kdm4b protein_coding processed_transcript MGP_BALBcJ_T0048215.1 MGP_BALBcJ_G0023884.1 mouse_genomes_project 17 56317253 56317522 + Kdm4b protein_coding processed_transcript MGP_BALBcJ_T0048216.1 MGP_BALBcJ_G0023884.1 mouse_genomes_project 17 56317656 56326607 + MGP_BALBcJ_P0048216 Kdm4b protein_coding protein_coding MGP_BALBcJ_T0006900.1 MGP_BALBcJ_G0005679.1 mouse_genomes_project 17 27278295 27280386 + E230001N04Rik lincRNA lincRNA MGP_BALBcJ_T0006901.1 MGP_BALBcJ_G0005679.1 mouse_genomes_project 17 27278331 27280386 + E230001N04Rik lincRNA lincRNA MGP_BALBcJ_T0047696.1 MGP_BALBcJ_G0023723.1 mouse_genomes_project 17 40592794 40629962 + MGP_BALBcJ_P0047696 Rhag protein_coding protein_coding MGP_BALBcJ_T0046150.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24378290 24383988 - MGP_BALBcJ_P0046150 Haghl protein_coding protein_coding MGP_BALBcJ_T0046151.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24381237 24383783 - Haghl protein_coding retained_intron MGP_BALBcJ_T0046152.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24381249 24383980 - Haghl protein_coding retained_intron MGP_BALBcJ_T0046153.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24381261 24384016 - MGP_BALBcJ_P0046153 Haghl protein_coding protein_coding MGP_BALBcJ_T0046154.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24381987 24384015 - Haghl protein_coding retained_intron MGP_BALBcJ_T0046155.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24382276 24384014 - Haghl protein_coding retained_intron MGP_BALBcJ_T0046156.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24382580 24383753 - Haghl protein_coding retained_intron MGP_BALBcJ_T0046157.1 MGP_BALBcJ_G0023330.1 mouse_genomes_project 17 24382763 24383991 - MGP_BALBcJ_P0046157 Haghl protein_coding protein_coding MGP_BALBcJ_T0048113.1 MGP_BALBcJ_G0023842.1 mouse_genomes_project 17 49913673 50109530 - MGP_BALBcJ_P0048113 Rftn1 protein_coding protein_coding MGP_BALBcJ_T0048114.1 MGP_BALBcJ_G0023842.1 mouse_genomes_project 17 49956824 50109717 - Rftn1 protein_coding retained_intron MGP_BALBcJ_T0048261.1 MGP_BALBcJ_G0023897.1 mouse_genomes_project 17 56699321 56704482 + MGP_BALBcJ_P0048261 Dus3l protein_coding protein_coding MGP_BALBcJ_T0006929.1 MGP_BALBcJ_G0005703.1 mouse_genomes_project 17 45223670 45232140 + B230354K17Rik lincRNA lincRNA MGP_BALBcJ_T0102339.1 MGP_BALBcJ_G0040155.1 mouse_genomes_project 17 35912106 35912332 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047623.1 MGP_BALBcJ_G0023663.1 mouse_genomes_project 17 36589840 36590888 - MGP_BALBcJ_P0047623 protein_coding protein_coding MGP_BALBcJ_T0045359.1 MGP_BALBcJ_G0023072.1 mouse_genomes_project 17 514330 560156 - MGP_BALBcJ_P0045359 Tfb1m protein_coding protein_coding MGP_BALBcJ_T0000978.1 MGP_BALBcJ_G0000906.1 mouse_genomes_project 17 30375321 30379555 - TEC TEC MGP_BALBcJ_T0046862.1 MGP_BALBcJ_G0023498.1 mouse_genomes_project 17 32663932 32683215 - MGP_BALBcJ_P0046862 Rab11b protein_coding protein_coding MGP_BALBcJ_T0046863.1 MGP_BALBcJ_G0023498.1 mouse_genomes_project 17 32670302 32683169 - Rab11b protein_coding processed_transcript MGP_BALBcJ_T0017548.1 MGP_BALBcJ_G0015292.1 mouse_genomes_project 17 49346733 49348037 - Gm20540 processed_transcript processed_transcript MGP_BALBcJ_T0047213.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085206 34087326 + Lsm2 protein_coding retained_intron MGP_BALBcJ_T0047214.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085224 34089236 + MGP_BALBcJ_P0047214 Lsm2 protein_coding protein_coding MGP_BALBcJ_T0047215.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085255 34089016 + Lsm2 protein_coding processed_transcript MGP_BALBcJ_T0047216.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085465 34088937 + Lsm2 protein_coding processed_transcript MGP_BALBcJ_T0047217.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085473 34089236 + MGP_BALBcJ_P0047217 Lsm2 protein_coding protein_coding MGP_BALBcJ_T0047218.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085503 34089234 + Lsm2 protein_coding processed_transcript MGP_BALBcJ_T0047219.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085503 34089179 + Lsm2 protein_coding processed_transcript MGP_BALBcJ_T0047220.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085503 34089234 + MGP_BALBcJ_P0047220 Lsm2 protein_coding protein_coding MGP_BALBcJ_T0047221.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085513 34088842 + Lsm2 protein_coding retained_intron MGP_BALBcJ_T0047222.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34085553 34088842 + Lsm2 protein_coding retained_intron MGP_BALBcJ_T0047223.1 MGP_BALBcJ_G0023570.1 mouse_genomes_project 17 34087952 34089235 + Lsm2 protein_coding retained_intron MGP_BALBcJ_T0000985.1 MGP_BALBcJ_G0000913.1 mouse_genomes_project 17 51762739 51764644 + TEC TEC MGP_BALBcJ_T0098343.1 MGP_BALBcJ_G0036397.1 mouse_genomes_project 17 80975469 80975861 + pseudogene pseudogene MGP_BALBcJ_T0047636.1 MGP_BALBcJ_G0023675.1 mouse_genomes_project 17 36875665 36876700 + MGP_BALBcJ_P0047636 Olfr107 protein_coding protein_coding MGP_BALBcJ_T0102301.1 MGP_BALBcJ_G0040117.1 mouse_genomes_project 17 21416981 21418216 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045631.1 MGP_BALBcJ_G0023152.1 mouse_genomes_project 17 15485680 15491812 + Fpr2 protein_coding processed_transcript MGP_BALBcJ_T0045633.1 MGP_BALBcJ_G0023152.1 mouse_genomes_project 17 15485744 15491712 + MGP_BALBcJ_P0045633 Fpr2 protein_coding protein_coding MGP_BALBcJ_T0047738.1 MGP_BALBcJ_G0023745.1 mouse_genomes_project 17 43962406 44055875 + MGP_BALBcJ_P0047738 Clic5 protein_coding protein_coding MGP_BALBcJ_T0047763.1 MGP_BALBcJ_G0023753.1 mouse_genomes_project 17 45347210 45354715 + MGP_BALBcJ_P0047763 Nfkbie protein_coding protein_coding MGP_BALBcJ_T0010196.1 MGP_BALBcJ_G0008321.1 mouse_genomes_project 17 56086080 56086193 - Gm44397 miRNA miRNA MGP_BALBcJ_T0006962.1 MGP_BALBcJ_G0005724.1 mouse_genomes_project 17 84084973 84088018 - C430042M11Rik lincRNA lincRNA MGP_BALBcJ_T0048256.1 MGP_BALBcJ_G0023893.1 mouse_genomes_project 17 56605510 56645266 + MGP_BALBcJ_P0048256 Ranbp3 protein_coding protein_coding MGP_BALBcJ_T0010206.1 MGP_BALBcJ_G0008331.1 mouse_genomes_project 17 78490551 78490637 + Gm25069 miRNA miRNA MGP_BALBcJ_T0100851.1 MGP_BALBcJ_G0038887.1 mouse_genomes_project 17 83474863 83474998 + Gm24240 snoRNA snoRNA MGP_BALBcJ_T0045398.1 MGP_BALBcJ_G0023084.1 mouse_genomes_project 17 3162696 3199895 + protein_coding processed_transcript MGP_BALBcJ_T0045399.1 MGP_BALBcJ_G0023084.1 mouse_genomes_project 17 3162738 3278604 + MGP_BALBcJ_P0045399 protein_coding protein_coding MGP_BALBcJ_T0045400.1 MGP_BALBcJ_G0023084.1 mouse_genomes_project 17 3183383 3186183 + protein_coding processed_transcript MGP_BALBcJ_T0045401.1 MGP_BALBcJ_G0023084.1 mouse_genomes_project 17 3198313 3199892 + protein_coding processed_transcript MGP_BALBcJ_T0045402.1 MGP_BALBcJ_G0023084.1 mouse_genomes_project 17 3199250 3299061 + protein_coding retained_intron MGP_BALBcJ_T0045486.1 MGP_BALBcJ_G0023113.1 mouse_genomes_project 17 9644104 9686373 + MGP_BALBcJ_P0045486 Plg protein_coding protein_coding MGP_BALBcJ_T0047622.1 MGP_BALBcJ_G0023662.1 mouse_genomes_project 17 36525694 36526633 - MGP_BALBcJ_P0047622 Olfr91 protein_coding protein_coding MGP_BALBcJ_T0099565.1 MGP_BALBcJ_G0037601.1 mouse_genomes_project 17 32914994 32915099 + Gm23111 snRNA snRNA MGP_BALBcJ_T0102281.1 MGP_BALBcJ_G0040097.1 mouse_genomes_project 17 16719636 17187776 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046948.1 MGP_BALBcJ_G0023514.1 mouse_genomes_project 17 32931545 35335013 - protein_coding processed_transcript MGP_BALBcJ_T0046949.1 MGP_BALBcJ_G0023514.1 mouse_genomes_project 17 32956262 32961059 - MGP_BALBcJ_P0046949 protein_coding protein_coding MGP_BALBcJ_T0046950.1 MGP_BALBcJ_G0023514.1 mouse_genomes_project 17 32956263 32961053 - protein_coding retained_intron MGP_BALBcJ_T0046951.1 MGP_BALBcJ_G0023514.1 mouse_genomes_project 17 32956271 32959968 - MGP_BALBcJ_P0046951 protein_coding unknown_likely_coding MGP_BALBcJ_T0046952.1 MGP_BALBcJ_G0023514.1 mouse_genomes_project 17 32956284 32957988 - protein_coding retained_intron MGP_BALBcJ_T0046953.1 MGP_BALBcJ_G0023514.1 mouse_genomes_project 17 32956298 32961103 - MGP_BALBcJ_P0046953 protein_coding protein_coding MGP_BALBcJ_T0048664.1 MGP_BALBcJ_G0024047.1 mouse_genomes_project 17 85337051 85706375 + MGP_BALBcJ_P0048664 Camkmt protein_coding protein_coding MGP_BALBcJ_T0047931.1 MGP_BALBcJ_G0023791.1 mouse_genomes_project 17 46545277 46559307 + Pex6 protein_coding retained_intron MGP_BALBcJ_T0047932.1 MGP_BALBcJ_G0023791.1 mouse_genomes_project 17 46545277 46559307 + MGP_BALBcJ_P0047932 Pex6 protein_coding protein_coding MGP_BALBcJ_T0047933.1 MGP_BALBcJ_G0023791.1 mouse_genomes_project 17 46545290 46551231 + Pex6 protein_coding processed_transcript MGP_BALBcJ_T0047934.1 MGP_BALBcJ_G0023791.1 mouse_genomes_project 17 46553986 46555530 + Pex6 protein_coding retained_intron MGP_BALBcJ_T0100846.1 MGP_BALBcJ_G0038882.1 mouse_genomes_project 17 71794282 71794360 + Snord53 snoRNA snoRNA MGP_BALBcJ_T0047688.1 MGP_BALBcJ_G0023719.1 mouse_genomes_project 17 40345142 40349167 + MGP_BALBcJ_P0047688 Esp4 protein_coding protein_coding MGP_BALBcJ_T0047329.1 MGP_BALBcJ_G0023592.1 mouse_genomes_project 17 34298247 34301701 - MGP_BALBcJ_P0047329 Lst1 protein_coding protein_coding MGP_BALBcJ_T0047675.1 MGP_BALBcJ_G0023706.1 mouse_genomes_project 17 37810598 37811538 - MGP_BALBcJ_P0047675 Olfr137 protein_coding protein_coding MGP_BALBcJ_T0045502.1 MGP_BALBcJ_G0023119.1 mouse_genomes_project 17 10151251 10153060 + MGP_BALBcJ_P0045502 Mrgprh protein_coding protein_coding MGP_BALBcJ_T0006955.1 MGP_BALBcJ_G0005718.1 mouse_genomes_project 17 70979141 70980716 - Gm26510 lincRNA lincRNA MGP_BALBcJ_T0006956.1 MGP_BALBcJ_G0005718.1 mouse_genomes_project 17 70979144 71031423 - Gm26510 lincRNA lincRNA MGP_BALBcJ_T0102364.1 MGP_BALBcJ_G0040180.1 mouse_genomes_project 17 53787562 53788123 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0006963.1 MGP_BALBcJ_G0005725.1 mouse_genomes_project 17 85197608 85200351 - 1110020A21Rik lincRNA lincRNA MGP_BALBcJ_T0046678.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30337014 30355370 - MGP_BALBcJ_P0046678 Wdr4 protein_coding protein_coding MGP_BALBcJ_T0046679.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30337015 30355383 - MGP_BALBcJ_P0046679 Wdr4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046680.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30337015 30355866 - MGP_BALBcJ_P0046680 Wdr4 protein_coding protein_coding MGP_BALBcJ_T0046681.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30337017 30355383 - MGP_BALBcJ_P0046681 Wdr4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046682.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30338818 30343981 - Wdr4 protein_coding retained_intron MGP_BALBcJ_T0046683.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30342140 30346267 - Wdr4 protein_coding retained_intron MGP_BALBcJ_T0046684.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30345736 30353027 - Wdr4 protein_coding retained_intron MGP_BALBcJ_T0046685.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30346224 30363013 - MGP_BALBcJ_P0046685 Wdr4 protein_coding protein_coding MGP_BALBcJ_T0046686.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30346234 30355393 - MGP_BALBcJ_P0046686 Wdr4 protein_coding protein_coding MGP_BALBcJ_T0046687.1 MGP_BALBcJ_G0023452.1 mouse_genomes_project 17 30355557 30363073 - Wdr4 protein_coding processed_transcript MGP_BALBcJ_T0011401.1 MGP_BALBcJ_G0009526.1 mouse_genomes_project 17 30884193 30884464 + Gm25883 misc_RNA misc_RNA MGP_BALBcJ_T0046097.1 MGP_BALBcJ_G0023316.1 mouse_genomes_project 17 23916294 23918577 - MGP_BALBcJ_P0046097 Tpsab1 protein_coding protein_coding MGP_BALBcJ_T0046098.1 MGP_BALBcJ_G0023316.1 mouse_genomes_project 17 23916295 23918612 - Tpsab1 protein_coding processed_transcript MGP_BALBcJ_T0045412.1 MGP_BALBcJ_G0023092.1 mouse_genomes_project 17 4306409 4382385 + MGP_BALBcJ_P0045412 protein_coding protein_coding MGP_BALBcJ_T0047634.1 MGP_BALBcJ_G0023674.1 mouse_genomes_project 17 36799593 36800535 - MGP_BALBcJ_P0047634 Olfr103 protein_coding protein_coding MGP_BALBcJ_T0047635.1 MGP_BALBcJ_G0023674.1 mouse_genomes_project 17 36799593 36803372 - MGP_BALBcJ_P0047635 Olfr103 protein_coding protein_coding MGP_BALBcJ_T0099590.1 MGP_BALBcJ_G0037626.1 mouse_genomes_project 17 88700670 88700765 - Gm22542 snRNA snRNA MGP_BALBcJ_T0047300.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34247571 34259703 + MGP_BALBcJ_P0047300 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047301.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34247571 34259686 + MGP_BALBcJ_P0047301 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047302.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34247598 34259687 + MGP_BALBcJ_P0047302 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047303.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34247621 34252695 + MGP_BALBcJ_P0047303 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047304.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34247873 34254980 + MGP_BALBcJ_P0047304 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047305.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34247897 34252758 + MGP_BALBcJ_P0047305 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047306.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34248105 34251091 + MGP_BALBcJ_P0047306 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047307.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34248117 34258730 + MGP_BALBcJ_P0047307 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047308.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34248131 34259701 + MGP_BALBcJ_P0047308 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047309.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34248510 34251351 + Bag6 protein_coding retained_intron MGP_BALBcJ_T0047310.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34250958 34252236 + Bag6 protein_coding retained_intron MGP_BALBcJ_T0047311.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34252616 34253778 + Bag6 protein_coding retained_intron MGP_BALBcJ_T0047312.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34253544 34254371 + Bag6 protein_coding retained_intron MGP_BALBcJ_T0047313.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34254361 34254987 + Bag6 protein_coding retained_intron MGP_BALBcJ_T0047314.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34258268 34259700 + MGP_BALBcJ_P0047314 Bag6 protein_coding protein_coding MGP_BALBcJ_T0047315.1 MGP_BALBcJ_G0023589.1 mouse_genomes_project 17 34258757 34259677 + Bag6 protein_coding retained_intron MGP_BALBcJ_T0046382.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26316286 26361130 - MGP_BALBcJ_P0046382 Nudt3 protein_coding protein_coding MGP_BALBcJ_T0046383.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26317479 26360629 - MGP_BALBcJ_P0046383 Nudt3 protein_coding protein_coding MGP_BALBcJ_T0046384.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26317610 26320240 - Nudt3 protein_coding retained_intron MGP_BALBcJ_T0046385.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26317693 26360928 - MGP_BALBcJ_P0046385 Nudt3 protein_coding protein_coding MGP_BALBcJ_T0046386.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26317738 26360058 - Nudt3 protein_coding processed_transcript MGP_BALBcJ_T0046387.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26317857 26349353 - Nudt3 protein_coding processed_transcript MGP_BALBcJ_T0046388.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26318880 26360928 - MGP_BALBcJ_P0046388 Nudt3 protein_coding protein_coding MGP_BALBcJ_T0046389.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26318953 26360509 - MGP_BALBcJ_P0046389 Nudt3 protein_coding protein_coding MGP_BALBcJ_T0046390.1 MGP_BALBcJ_G0023386.1 mouse_genomes_project 17 26334671 26360928 - Nudt3 protein_coding retained_intron MGP_BALBcJ_T0046581.1 MGP_BALBcJ_G0023425.1 mouse_genomes_project 17 28115459 28127259 + Pi16 protein_coding retained_intron MGP_BALBcJ_T0046582.1 MGP_BALBcJ_G0023425.1 mouse_genomes_project 17 28115779 28127266 + MGP_BALBcJ_P0046582 Pi16 protein_coding protein_coding MGP_BALBcJ_T0046583.1 MGP_BALBcJ_G0023425.1 mouse_genomes_project 17 28115797 28127781 + MGP_BALBcJ_P0046583 Pi16 protein_coding protein_coding MGP_BALBcJ_T0045369.1 MGP_BALBcJ_G0023078.1 mouse_genomes_project 17 2457832 2459277 - MGP_BALBcJ_P0045369 Ldhal6b protein_coding protein_coding MGP_BALBcJ_T0046259.1 MGP_BALBcJ_G0023355.1 mouse_genomes_project 17 24734110 24737204 + MGP_BALBcJ_P0046259 Mrpl28 protein_coding protein_coding MGP_BALBcJ_T0046260.1 MGP_BALBcJ_G0023355.1 mouse_genomes_project 17 24734310 24735523 + Mrpl28 protein_coding retained_intron MGP_BALBcJ_T0046378.1 MGP_BALBcJ_G0023385.1 mouse_genomes_project 17 26300541 26302699 - MGP_BALBcJ_P0046378 AI413582 protein_coding protein_coding MGP_BALBcJ_T0046379.1 MGP_BALBcJ_G0023385.1 mouse_genomes_project 17 26300737 26302675 - MGP_BALBcJ_P0046379 AI413582 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046380.1 MGP_BALBcJ_G0023385.1 mouse_genomes_project 17 26300739 26302716 - AI413582 protein_coding retained_intron MGP_BALBcJ_T0046381.1 MGP_BALBcJ_G0023385.1 mouse_genomes_project 17 26301648 26302634 - AI413582 protein_coding processed_transcript MGP_BALBcJ_T0048514.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74712031 74889413 + MGP_BALBcJ_P0048514 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048515.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74712204 74888435 + MGP_BALBcJ_P0048515 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048516.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74712204 74888435 + MGP_BALBcJ_P0048516 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048517.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74712204 74888435 + MGP_BALBcJ_P0048517 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048518.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74712258 74751505 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048519.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74712288 74888435 + MGP_BALBcJ_P0048519 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048520.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74729835 74732743 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048521.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74740184 74745482 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048522.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74740202 74747201 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048523.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74745109 74747348 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048524.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74745438 74750447 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048525.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74783502 74805167 + MGP_BALBcJ_P0048525 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048526.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74788644 74791869 + MGP_BALBcJ_P0048526 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048527.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74796563 74805166 + MGP_BALBcJ_P0048527 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048528.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74796932 74825947 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048529.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74796962 74803975 + MGP_BALBcJ_P0048529 Birc6 protein_coding protein_coding MGP_BALBcJ_T0048530.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74797711 74801014 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048531.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74803606 74805166 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048532.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74838087 74845337 + MGP_BALBcJ_P0048532 Birc6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048533.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74838097 74839921 + Birc6 protein_coding processed_transcript MGP_BALBcJ_T0048534.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74839844 74889404 + MGP_BALBcJ_P0048534 Birc6 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048535.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74845218 74854849 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048536.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74856242 74867492 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0048537.1 MGP_BALBcJ_G0023990.1 mouse_genomes_project 17 74883407 74889126 + Birc6 protein_coding retained_intron MGP_BALBcJ_T0046048.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23697323 23726726 + MGP_BALBcJ_P0046048 Clcn7 protein_coding protein_coding MGP_BALBcJ_T0046049.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23697397 23710710 + Clcn7 protein_coding retained_intron MGP_BALBcJ_T0046050.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23700937 23726720 + MGP_BALBcJ_P0046050 Clcn7 protein_coding protein_coding MGP_BALBcJ_T0046051.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23709975 23714759 + MGP_BALBcJ_P0046051 Clcn7 protein_coding protein_coding MGP_BALBcJ_T0046052.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23710482 23716558 + Clcn7 protein_coding processed_transcript MGP_BALBcJ_T0046053.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23715346 23722554 + MGP_BALBcJ_P0046053 Clcn7 protein_coding protein_coding MGP_BALBcJ_T0046054.1 MGP_BALBcJ_G0023304.1 mouse_genomes_project 17 23723299 23724364 + Clcn7 protein_coding retained_intron MGP_BALBcJ_T0045733.1 MGP_BALBcJ_G0023220.1 mouse_genomes_project 17 21843890 21865663 + MGP_BALBcJ_P0045733 protein_coding protein_coding MGP_BALBcJ_T0102321.1 MGP_BALBcJ_G0040137.1 mouse_genomes_project 17 33808238 33810646 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010194.1 MGP_BALBcJ_G0008319.1 mouse_genomes_project 17 46378432 46378495 - Mir6976 miRNA miRNA MGP_BALBcJ_T0047630.1 MGP_BALBcJ_G0023670.1 mouse_genomes_project 17 36714665 36718930 + MGP_BALBcJ_P0047630 H2-M3 protein_coding protein_coding MGP_BALBcJ_T0046642.1 MGP_BALBcJ_G0023439.1 mouse_genomes_project 17 29410770 29432105 - MGP_BALBcJ_P0046642 Glo1 protein_coding protein_coding MGP_BALBcJ_T0013203.1 MGP_BALBcJ_G0011300.1 mouse_genomes_project 17 30787853 30788273 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048201.1 MGP_BALBcJ_G0023881.1 mouse_genomes_project 17 56199427 56208557 - MGP_BALBcJ_P0048201 Plin3 protein_coding unknown_likely_coding MGP_BALBcJ_T0048202.1 MGP_BALBcJ_G0023881.1 mouse_genomes_project 17 56199429 56211571 - MGP_BALBcJ_P0048202 Plin3 protein_coding protein_coding MGP_BALBcJ_T0010180.1 MGP_BALBcJ_G0008305.1 mouse_genomes_project 17 32989946 32990006 + Mir219c miRNA miRNA MGP_BALBcJ_T0048586.1 MGP_BALBcJ_G0024013.1 mouse_genomes_project 17 80071353 80123228 - MGP_BALBcJ_P0048586 Atl2 protein_coding protein_coding MGP_BALBcJ_T0048587.1 MGP_BALBcJ_G0024013.1 mouse_genomes_project 17 80071360 80123230 - MGP_BALBcJ_P0048587 Atl2 protein_coding protein_coding MGP_BALBcJ_T0048358.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66048168 66154495 - MGP_BALBcJ_P0048358 Ankrd12 protein_coding protein_coding MGP_BALBcJ_T0048359.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66048680 66053827 - Ankrd12 protein_coding processed_transcript MGP_BALBcJ_T0048360.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66057563 66064551 - Ankrd12 protein_coding processed_transcript MGP_BALBcJ_T0048361.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66068641 66154471 - MGP_BALBcJ_P0048361 Ankrd12 protein_coding protein_coding MGP_BALBcJ_T0048362.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66100595 66154493 - Ankrd12 protein_coding retained_intron MGP_BALBcJ_T0048363.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66113199 66154538 - Ankrd12 protein_coding retained_intron MGP_BALBcJ_T0048364.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66113540 66154488 - Ankrd12 protein_coding retained_intron MGP_BALBcJ_T0048365.1 MGP_BALBcJ_G0023942.1 mouse_genomes_project 17 66126280 66127135 - Ankrd12 protein_coding processed_transcript MGP_BALBcJ_T0006973.1 MGP_BALBcJ_G0005732.1 mouse_genomes_project 17 95134540 95136174 - lincRNA lincRNA MGP_BALBcJ_T0006974.1 MGP_BALBcJ_G0005732.1 mouse_genomes_project 17 95135846 95139138 - lincRNA lincRNA MGP_BALBcJ_T0045636.1 MGP_BALBcJ_G0023155.1 mouse_genomes_project 17 15623915 15624887 + MGP_BALBcJ_P0045636 Fpr-rs4 protein_coding protein_coding MGP_BALBcJ_T0047535.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35602088 35613304 - MGP_BALBcJ_P0047535 Trim39 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047536.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35602088 35616556 - MGP_BALBcJ_P0047536 Trim39 protein_coding protein_coding MGP_BALBcJ_T0047537.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35602088 35616119 - MGP_BALBcJ_P0047537 Trim39 protein_coding protein_coding MGP_BALBcJ_T0047538.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35602325 35613772 - MGP_BALBcJ_P0047538 Trim39 protein_coding protein_coding MGP_BALBcJ_T0047539.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35605564 35613247 - Trim39 protein_coding processed_transcript MGP_BALBcJ_T0047540.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35606637 35615935 - Trim39 protein_coding processed_transcript MGP_BALBcJ_T0047541.1 MGP_BALBcJ_G0023637.1 mouse_genomes_project 17 35606639 35616799 - Trim39 protein_coding retained_intron MGP_BALBcJ_T0102280.1 MGP_BALBcJ_G0040096.1 mouse_genomes_project 17 16676310 16676436 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013195.1 MGP_BALBcJ_G0011292.1 mouse_genomes_project 17 22552362 22552870 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046336.1 MGP_BALBcJ_G0023373.1 mouse_genomes_project 17 25609995 25611491 - MGP_BALBcJ_P0046336 Cuta protein_coding protein_coding MGP_BALBcJ_T0046337.1 MGP_BALBcJ_G0023373.1 mouse_genomes_project 17 25609995 25611501 - MGP_BALBcJ_P0046337 Cuta protein_coding protein_coding MGP_BALBcJ_T0006888.1 MGP_BALBcJ_G0005669.1 mouse_genomes_project 17 22222252 22230146 + 9530082P21Rik lincRNA lincRNA MGP_BALBcJ_T0006889.1 MGP_BALBcJ_G0005669.1 mouse_genomes_project 17 22228472 22233310 + 9530082P21Rik lincRNA lincRNA MGP_BALBcJ_T0006890.1 MGP_BALBcJ_G0005669.1 mouse_genomes_project 17 22228573 22230438 + 9530082P21Rik lincRNA lincRNA MGP_BALBcJ_T0006957.1 MGP_BALBcJ_G0005719.1 mouse_genomes_project 17 70983433 71506289 + lincRNA lincRNA MGP_BALBcJ_T0045490.1 MGP_BALBcJ_G0023117.1 mouse_genomes_project 17 9950652 10039956 - MGP_BALBcJ_P0045490 Igf2r protein_coding protein_coding MGP_BALBcJ_T0045491.1 MGP_BALBcJ_G0023117.1 mouse_genomes_project 17 9967133 9969886 - MGP_BALBcJ_P0045491 Igf2r protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045492.1 MGP_BALBcJ_G0023117.1 mouse_genomes_project 17 10018956 10021862 - MGP_BALBcJ_P0045492 Igf2r protein_coding protein_coding MGP_BALBcJ_T0013177.1 MGP_BALBcJ_G0011274.1 mouse_genomes_project 17 2863315 2863799 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010166.1 MGP_BALBcJ_G0008291.1 mouse_genomes_project 17 25607495 25607563 + Mir6968 miRNA miRNA MGP_BALBcJ_T0099570.1 MGP_BALBcJ_G0037606.1 mouse_genomes_project 17 43236285 43236428 + Gm25135 snRNA snRNA MGP_BALBcJ_T0047729.1 MGP_BALBcJ_G0023741.1 mouse_genomes_project 17 43454853 43534582 + MGP_BALBcJ_P0047729 Cyp39a1 protein_coding protein_coding MGP_BALBcJ_T0102314.1 MGP_BALBcJ_G0040130.1 mouse_genomes_project 17 33344980 33346699 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048683.1 MGP_BALBcJ_G0024058.1 mouse_genomes_project 17 87316420 87330131 + MGP_BALBcJ_P0048683 Cript protein_coding protein_coding MGP_BALBcJ_T0048684.1 MGP_BALBcJ_G0024058.1 mouse_genomes_project 17 87316480 87319102 + Cript protein_coding retained_intron MGP_BALBcJ_T0048685.1 MGP_BALBcJ_G0024058.1 mouse_genomes_project 17 87316481 87329793 + MGP_BALBcJ_P0048685 Cript protein_coding protein_coding MGP_BALBcJ_T0048052.1 MGP_BALBcJ_G0023826.1 mouse_genomes_project 17 48133909 48147495 + MGP_BALBcJ_P0048052 Trem1 protein_coding protein_coding MGP_BALBcJ_T0048053.1 MGP_BALBcJ_G0023826.1 mouse_genomes_project 17 48133912 48148057 + MGP_BALBcJ_P0048053 Trem1 protein_coding protein_coding MGP_BALBcJ_T0101648.1 MGP_BALBcJ_G0039649.1 mouse_genomes_project 17 26816114 26818004 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101649.1 MGP_BALBcJ_G0039649.1 mouse_genomes_project 17 26816489 26817678 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0003733.1 MGP_BALBcJ_G0003359.1 mouse_genomes_project 17 33049044 33060628 - BC051537 antisense antisense MGP_BALBcJ_T0047988.1 MGP_BALBcJ_G0023810.1 mouse_genomes_project 17 47461031 47473130 - MGP_BALBcJ_P0047988 Bysl protein_coding protein_coding MGP_BALBcJ_T0045940.1 MGP_BALBcJ_G0023281.1 mouse_genomes_project 17 23248009 23257719 - MGP_BALBcJ_P0045940 Tbl3 protein_coding protein_coding MGP_BALBcJ_T0045949.1 MGP_BALBcJ_G0023281.1 mouse_genomes_project 17 23250520 23257690 - Tbl3 protein_coding retained_intron MGP_BALBcJ_T0045950.1 MGP_BALBcJ_G0023281.1 mouse_genomes_project 17 23250948 23252570 - MGP_BALBcJ_P0045950 Tbl3 protein_coding protein_coding MGP_BALBcJ_T0045951.1 MGP_BALBcJ_G0023281.1 mouse_genomes_project 17 23252080 23253403 - Tbl3 protein_coding retained_intron MGP_BALBcJ_T0045952.1 MGP_BALBcJ_G0023281.1 mouse_genomes_project 17 23254686 23255883 - Tbl3 protein_coding retained_intron MGP_BALBcJ_T0045734.1 MGP_BALBcJ_G0023221.1 mouse_genomes_project 17 22027227 22034721 - MGP_BALBcJ_P0045734 Zfp213 protein_coding protein_coding MGP_BALBcJ_T0046807.1 MGP_BALBcJ_G0023485.1 mouse_genomes_project 17 32038168 32042267 - MGP_BALBcJ_P0046807 Morc2b protein_coding protein_coding MGP_BALBcJ_T0046808.1 MGP_BALBcJ_G0023485.1 mouse_genomes_project 17 32038223 32042083 - MGP_BALBcJ_P0046808 Morc2b protein_coding protein_coding MGP_BALBcJ_T0048711.1 MGP_BALBcJ_G0024064.1 mouse_genomes_project 17 87962247 87977297 + MGP_BALBcJ_P0048711 Epcam protein_coding protein_coding MGP_BALBcJ_T0047058.1 MGP_BALBcJ_G0023541.1 mouse_genomes_project 17 33468683 33475586 - MGP_BALBcJ_P0047058 Btnl4 protein_coding protein_coding MGP_BALBcJ_T0013196.1 MGP_BALBcJ_G0011293.1 mouse_genomes_project 17 22953114 22960455 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003742.1 MGP_BALBcJ_G0003368.1 mouse_genomes_project 17 35126653 35143139 + Gm16279 antisense antisense MGP_BALBcJ_T0045821.1 MGP_BALBcJ_G0023251.1 mouse_genomes_project 17 22566538 22574371 + MGP_BALBcJ_P0045821 Prss27 protein_coding protein_coding MGP_BALBcJ_T0048742.1 MGP_BALBcJ_G0024073.1 mouse_genomes_project 17 89016759 89062929 + MGP_BALBcJ_P0048742 Gtf2a1l protein_coding protein_coding MGP_BALBcJ_T0048743.1 MGP_BALBcJ_G0024073.1 mouse_genomes_project 17 89016795 89042868 + MGP_BALBcJ_P0048743 Gtf2a1l protein_coding protein_coding MGP_BALBcJ_T0047625.1 MGP_BALBcJ_G0023665.1 mouse_genomes_project 17 36636662 36638866 + MGP_BALBcJ_P0047625 Ubd protein_coding protein_coding MGP_BALBcJ_T0013277.1 MGP_BALBcJ_G0011374.1 mouse_genomes_project 17 90892625 90892960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047442.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35106832 35122402 + MGP_BALBcJ_P0047442 Dhx16 protein_coding protein_coding MGP_BALBcJ_T0047443.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35106838 35122357 + MGP_BALBcJ_P0047443 Dhx16 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047444.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35117113 35118964 + Dhx16 protein_coding retained_intron MGP_BALBcJ_T0047445.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35117305 35118023 + Dhx16 protein_coding retained_intron MGP_BALBcJ_T0047446.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35117311 35118111 + Dhx16 protein_coding retained_intron MGP_BALBcJ_T0047447.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35117395 35118862 + Dhx16 protein_coding retained_intron MGP_BALBcJ_T0047448.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35118650 35122398 + MGP_BALBcJ_P0047448 Dhx16 protein_coding protein_coding MGP_BALBcJ_T0047449.1 MGP_BALBcJ_G0023618.1 mouse_genomes_project 17 35120479 35122285 + Dhx16 protein_coding retained_intron MGP_BALBcJ_T0003711.1 MGP_BALBcJ_G0003344.1 mouse_genomes_project 17 25269005 25273738 - Gm17218 antisense antisense MGP_BALBcJ_T0046143.1 MGP_BALBcJ_G0023328.1 mouse_genomes_project 17 24346381 24352087 - MGP_BALBcJ_P0046143 Msln protein_coding protein_coding MGP_BALBcJ_T0045560.1 MGP_BALBcJ_G0023135.1 mouse_genomes_project 17 12418629 12421382 + MGP_BALBcJ_P0045560 1600012H06Rik protein_coding protein_coding MGP_BALBcJ_T0045561.1 MGP_BALBcJ_G0023135.1 mouse_genomes_project 17 12418675 12421380 + MGP_BALBcJ_P0045561 1600012H06Rik protein_coding protein_coding MGP_BALBcJ_T0045562.1 MGP_BALBcJ_G0023135.1 mouse_genomes_project 17 12418714 12420432 + MGP_BALBcJ_P0045562 1600012H06Rik protein_coding protein_coding MGP_BALBcJ_T0045563.1 MGP_BALBcJ_G0023135.1 mouse_genomes_project 17 12418716 12435004 + 1600012H06Rik protein_coding processed_transcript MGP_BALBcJ_T0045824.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22601878 22668914 - MGP_BALBcJ_P0045824 Pdpk1 protein_coding protein_coding MGP_BALBcJ_T0045825.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22601886 22669007 - MGP_BALBcJ_P0045825 Pdpk1 protein_coding protein_coding MGP_BALBcJ_T0045826.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22604016 22669024 - MGP_BALBcJ_P0045826 Pdpk1 protein_coding protein_coding MGP_BALBcJ_T0045827.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22616260 22621859 - Pdpk1 protein_coding processed_transcript MGP_BALBcJ_T0045828.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22619663 22678773 - Pdpk1 protein_coding processed_transcript MGP_BALBcJ_T0045829.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22631489 22669010 - Pdpk1 protein_coding retained_intron MGP_BALBcJ_T0045830.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22634311 22668215 - MGP_BALBcJ_P0045830 Pdpk1 protein_coding protein_coding MGP_BALBcJ_T0045831.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22634363 22648274 - MGP_BALBcJ_P0045831 Pdpk1 protein_coding protein_coding MGP_BALBcJ_T0045832.1 MGP_BALBcJ_G0023253.1 mouse_genomes_project 17 22638379 22668582 - MGP_BALBcJ_P0045832 Pdpk1 protein_coding protein_coding MGP_BALBcJ_T0045569.1 MGP_BALBcJ_G0023137.1 mouse_genomes_project 17 12447541 12485887 + MGP_BALBcJ_P0045569 protein_coding protein_coding MGP_BALBcJ_T0045570.1 MGP_BALBcJ_G0023137.1 mouse_genomes_project 17 12447571 12603520 + MGP_BALBcJ_P0045570 protein_coding protein_coding MGP_BALBcJ_T0045571.1 MGP_BALBcJ_G0023137.1 mouse_genomes_project 17 12447571 12497136 + MGP_BALBcJ_P0045571 protein_coding protein_coding MGP_BALBcJ_T0045572.1 MGP_BALBcJ_G0023137.1 mouse_genomes_project 17 12495858 12603516 + MGP_BALBcJ_P0045572 protein_coding unknown_likely_coding MGP_BALBcJ_T0045573.1 MGP_BALBcJ_G0023137.1 mouse_genomes_project 17 12496447 12603511 + MGP_BALBcJ_P0045573 protein_coding protein_coding MGP_BALBcJ_T0047336.1 MGP_BALBcJ_G0023596.1 mouse_genomes_project 17 34335749 34351449 - MGP_BALBcJ_P0047336 Nfkbil1 protein_coding protein_coding MGP_BALBcJ_T0047338.1 MGP_BALBcJ_G0023596.1 mouse_genomes_project 17 34336409 34337231 - Nfkbil1 protein_coding processed_transcript MGP_BALBcJ_T0047080.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643619 33646690 + MGP_BALBcJ_P0047080 Ager protein_coding protein_coding MGP_BALBcJ_T0047081.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643619 33646694 + MGP_BALBcJ_P0047081 Ager protein_coding protein_coding MGP_BALBcJ_T0047082.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643632 33646665 + Ager protein_coding processed_transcript MGP_BALBcJ_T0047083.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643632 33646665 + Ager protein_coding retained_intron MGP_BALBcJ_T0047084.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646618 + Ager protein_coding retained_intron MGP_BALBcJ_T0047085.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646618 + Ager protein_coding retained_intron MGP_BALBcJ_T0047086.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646618 + Ager protein_coding retained_intron MGP_BALBcJ_T0047087.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646654 + Ager protein_coding retained_intron MGP_BALBcJ_T0047088.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646618 + Ager protein_coding retained_intron MGP_BALBcJ_T0047089.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646618 + Ager protein_coding retained_intron MGP_BALBcJ_T0047090.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646618 + Ager protein_coding retained_intron MGP_BALBcJ_T0047091.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646654 + MGP_BALBcJ_P0047091 Ager protein_coding protein_coding MGP_BALBcJ_T0047092.1 MGP_BALBcJ_G0023545.1 mouse_genomes_project 17 33643651 33646654 + MGP_BALBcJ_P0047092 Ager protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048296.1 MGP_BALBcJ_G0023917.1 mouse_genomes_project 17 57158860 57163558 - MGP_BALBcJ_P0048296 Tnfsf14 protein_coding protein_coding MGP_BALBcJ_T0045978.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23449386 23454811 + MGP_BALBcJ_P0045978 Spsb3 protein_coding protein_coding MGP_BALBcJ_T0045979.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23449393 23454808 + MGP_BALBcJ_P0045979 Spsb3 protein_coding protein_coding MGP_BALBcJ_T0045980.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23449421 23453180 + MGP_BALBcJ_P0045980 Spsb3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045981.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23449456 23454798 + MGP_BALBcJ_P0045981 Spsb3 protein_coding protein_coding MGP_BALBcJ_T0045982.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23449478 23454813 + Spsb3 protein_coding retained_intron MGP_BALBcJ_T0045983.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23449868 23454810 + MGP_BALBcJ_P0045983 Spsb3 protein_coding protein_coding MGP_BALBcJ_T0045984.1 MGP_BALBcJ_G0023293.1 mouse_genomes_project 17 23450565 23453024 + MGP_BALBcJ_P0045984 Spsb3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047572.1 MGP_BALBcJ_G0023651.1 mouse_genomes_project 17 36318474 36330826 + MGP_BALBcJ_P0047572 Trim31 protein_coding protein_coding MGP_BALBcJ_T0102295.1 MGP_BALBcJ_G0040111.1 mouse_genomes_project 17 19211160 19211691 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045718.1 MGP_BALBcJ_G0023212.1 mouse_genomes_project 17 21064640 21064811 + MGP_BALBcJ_P0045718 Gm9805 protein_coding protein_coding MGP_BALBcJ_T0045424.1 MGP_BALBcJ_G0023098.1 mouse_genomes_project 17 5535607 5558821 + MGP_BALBcJ_P0045424 Ccr6 protein_coding protein_coding MGP_BALBcJ_T0045425.1 MGP_BALBcJ_G0023098.1 mouse_genomes_project 17 5542022 5558821 + MGP_BALBcJ_P0045425 Ccr6 protein_coding protein_coding MGP_BALBcJ_T0045426.1 MGP_BALBcJ_G0023098.1 mouse_genomes_project 17 5543304 5558821 + MGP_BALBcJ_P0045426 Ccr6 protein_coding protein_coding MGP_BALBcJ_T0045427.1 MGP_BALBcJ_G0023098.1 mouse_genomes_project 17 5543304 5558821 + MGP_BALBcJ_P0045427 Ccr6 protein_coding protein_coding MGP_BALBcJ_T0045428.1 MGP_BALBcJ_G0023098.1 mouse_genomes_project 17 5543304 5558821 + MGP_BALBcJ_P0045428 Ccr6 protein_coding protein_coding MGP_BALBcJ_T0045429.1 MGP_BALBcJ_G0023098.1 mouse_genomes_project 17 5543304 5558821 + MGP_BALBcJ_P0045429 Ccr6 protein_coding protein_coding MGP_BALBcJ_T0048406.1 MGP_BALBcJ_G0023957.1 mouse_genomes_project 17 69542357 69592806 + MGP_BALBcJ_P0048406 Akain1 protein_coding protein_coding MGP_BALBcJ_T0099566.1 MGP_BALBcJ_G0037602.1 mouse_genomes_project 17 34154634 34154738 + Gm23421 snRNA snRNA MGP_BALBcJ_T0045774.1 MGP_BALBcJ_G0023235.1 mouse_genomes_project 17 22233085 22250669 - MGP_BALBcJ_P0045774 Flywch1 protein_coding unknown_likely_coding MGP_BALBcJ_T0045775.1 MGP_BALBcJ_G0023235.1 mouse_genomes_project 17 22234682 22250667 - MGP_BALBcJ_P0045775 Flywch1 protein_coding protein_coding MGP_BALBcJ_T0045776.1 MGP_BALBcJ_G0023235.1 mouse_genomes_project 17 22234691 22243047 - MGP_BALBcJ_P0045776 Flywch1 protein_coding protein_coding MGP_BALBcJ_T0047878.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46116041 46139812 - MGP_BALBcJ_P0047878 Abcc10 protein_coding protein_coding MGP_BALBcJ_T0047879.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46116050 46139765 - MGP_BALBcJ_P0047879 Abcc10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047880.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46116053 46139768 - MGP_BALBcJ_P0047880 Abcc10 protein_coding protein_coding MGP_BALBcJ_T0047881.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46116241 46137558 - MGP_BALBcJ_P0047881 Abcc10 protein_coding protein_coding MGP_BALBcJ_T0047882.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46128026 46135424 - MGP_BALBcJ_P0047882 Abcc10 protein_coding protein_coding MGP_BALBcJ_T0047883.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46134649 46139786 - Abcc10 protein_coding retained_intron MGP_BALBcJ_T0047884.1 MGP_BALBcJ_G0023774.1 mouse_genomes_project 17 46136348 46140141 - Abcc10 protein_coding processed_transcript MGP_BALBcJ_T0099582.1 MGP_BALBcJ_G0037618.1 mouse_genomes_project 17 73146702 73146809 + Gm23649 snRNA snRNA MGP_BALBcJ_T0013183.1 MGP_BALBcJ_G0011280.1 mouse_genomes_project 17 8813190 8813484 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098544.1 MGP_BALBcJ_G0036598.1 mouse_genomes_project 17 79058520 79058639 + n-R5s29 rRNA rRNA MGP_BALBcJ_T0046031.1 MGP_BALBcJ_G0023301.1 mouse_genomes_project 17 23619306 23642701 - MGP_BALBcJ_P0046031 Tmem204 protein_coding protein_coding MGP_BALBcJ_T0046032.1 MGP_BALBcJ_G0023301.1 mouse_genomes_project 17 23619508 23639746 - MGP_BALBcJ_P0046032 Tmem204 protein_coding protein_coding MGP_BALBcJ_T0003726.1 MGP_BALBcJ_G0003355.1 mouse_genomes_project 17 31684804 31686002 + Gm17115 antisense antisense MGP_BALBcJ_T0047295.1 MGP_BALBcJ_G0023586.1 mouse_genomes_project 17 34233797 34237101 + MGP_BALBcJ_P0047295 Gpank1 protein_coding protein_coding MGP_BALBcJ_T0047296.1 MGP_BALBcJ_G0023586.1 mouse_genomes_project 17 34233975 34234658 + Gpank1 protein_coding processed_transcript MGP_BALBcJ_T0048262.1 MGP_BALBcJ_G0023898.1 mouse_genomes_project 17 56704639 56706598 + Prr22 protein_coding retained_intron MGP_BALBcJ_T0048263.1 MGP_BALBcJ_G0023898.1 mouse_genomes_project 17 56704665 56706524 + MGP_BALBcJ_P0048263 Prr22 protein_coding protein_coding MGP_BALBcJ_T0047935.1 MGP_BALBcJ_G0023792.1 mouse_genomes_project 17 46559429 46560567 - Gnmt protein_coding retained_intron MGP_BALBcJ_T0047936.1 MGP_BALBcJ_G0023792.1 mouse_genomes_project 17 46559429 46562853 - MGP_BALBcJ_P0047936 Gnmt protein_coding protein_coding MGP_BALBcJ_T0010200.1 MGP_BALBcJ_G0008325.1 mouse_genomes_project 17 63374403 63374487 + Gm24813 miRNA miRNA MGP_BALBcJ_T0010185.1 MGP_BALBcJ_G0008310.1 mouse_genomes_project 17 34309373 34309451 + Mir6973a miRNA miRNA MGP_BALBcJ_T0047691.1 MGP_BALBcJ_G0023722.1 mouse_genomes_project 17 40549438 40582203 - MGP_BALBcJ_P0047691 Crisp2 protein_coding protein_coding MGP_BALBcJ_T0047692.1 MGP_BALBcJ_G0023722.1 mouse_genomes_project 17 40571288 40582234 - MGP_BALBcJ_P0047692 Crisp2 protein_coding protein_coding MGP_BALBcJ_T0047693.1 MGP_BALBcJ_G0023722.1 mouse_genomes_project 17 40572989 40582164 - MGP_BALBcJ_P0047693 Crisp2 protein_coding protein_coding MGP_BALBcJ_T0047694.1 MGP_BALBcJ_G0023722.1 mouse_genomes_project 17 40573065 40582155 - MGP_BALBcJ_P0047694 Crisp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047695.1 MGP_BALBcJ_G0023722.1 mouse_genomes_project 17 40581342 40588681 - Crisp2 protein_coding processed_transcript MGP_BALBcJ_T0010204.1 MGP_BALBcJ_G0008329.1 mouse_genomes_project 17 67121435 67121524 - Mir5709 miRNA miRNA MGP_BALBcJ_T0045690.1 MGP_BALBcJ_G0023199.1 mouse_genomes_project 17 19868717 19868976 + MGP_BALBcJ_P0045690 Gm10509 protein_coding protein_coding MGP_BALBcJ_T0045749.1 MGP_BALBcJ_G0023224.1 mouse_genomes_project 17 22107549 22124652 - MGP_BALBcJ_P0045749 Mmp25 protein_coding protein_coding MGP_BALBcJ_T0045421.1 MGP_BALBcJ_G0023097.1 mouse_genomes_project 17 5475458 5502985 + MGP_BALBcJ_P0045421 Fgfr1op protein_coding protein_coding MGP_BALBcJ_T0045422.1 MGP_BALBcJ_G0023097.1 mouse_genomes_project 17 5475458 5503314 + MGP_BALBcJ_P0045422 Fgfr1op protein_coding protein_coding MGP_BALBcJ_T0045423.1 MGP_BALBcJ_G0023097.1 mouse_genomes_project 17 5488649 5501455 + MGP_BALBcJ_P0045423 Fgfr1op protein_coding protein_coding MGP_BALBcJ_T0045574.1 MGP_BALBcJ_G0023138.1 mouse_genomes_project 17 12907393 12916013 - MGP_BALBcJ_P0045574 Dll1 protein_coding protein_coding MGP_BALBcJ_T0045575.1 MGP_BALBcJ_G0023138.1 mouse_genomes_project 17 12907564 12908430 - Dll1 protein_coding retained_intron MGP_BALBcJ_T0045576.1 MGP_BALBcJ_G0023138.1 mouse_genomes_project 17 12910297 12911868 - Dll1 protein_coding processed_transcript MGP_BALBcJ_T0045577.1 MGP_BALBcJ_G0023138.1 mouse_genomes_project 17 12910650 12914109 - Dll1 protein_coding processed_transcript MGP_BALBcJ_T0045578.1 MGP_BALBcJ_G0023138.1 mouse_genomes_project 17 12911660 12915137 - Dll1 protein_coding retained_intron MGP_BALBcJ_T0045579.1 MGP_BALBcJ_G0023138.1 mouse_genomes_project 17 12914830 12917408 - Dll1 protein_coding processed_transcript MGP_BALBcJ_T0013257.1 MGP_BALBcJ_G0011354.1 mouse_genomes_project 17 53859152 53863865 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047520.1 MGP_BALBcJ_G0023633.1 mouse_genomes_project 17 35436835 35441312 - MGP_BALBcJ_P0047520 Gm8909 protein_coding protein_coding MGP_BALBcJ_T0045701.1 MGP_BALBcJ_G0023204.1 mouse_genomes_project 17 20120657 20167397 - MGP_BALBcJ_P0045701 Zfp942 protein_coding protein_coding MGP_BALBcJ_T0006934.1 MGP_BALBcJ_G0005707.1 mouse_genomes_project 17 47799854 47801314 + Gm15556 lincRNA lincRNA MGP_BALBcJ_T0006947.1 MGP_BALBcJ_G0005714.1 mouse_genomes_project 17 64555853 64598128 - AU016765 lincRNA lincRNA MGP_BALBcJ_T0006948.1 MGP_BALBcJ_G0005714.1 mouse_genomes_project 17 64555906 64598086 - AU016765 lincRNA lincRNA MGP_BALBcJ_T0006949.1 MGP_BALBcJ_G0005714.1 mouse_genomes_project 17 64555909 64598166 - AU016765 lincRNA lincRNA MGP_BALBcJ_T0006950.1 MGP_BALBcJ_G0005714.1 mouse_genomes_project 17 64555911 64598009 - AU016765 lincRNA lincRNA MGP_BALBcJ_T0102353.1 MGP_BALBcJ_G0040169.1 mouse_genomes_project 17 36825255 36826179 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0003739.1 MGP_BALBcJ_G0003365.1 mouse_genomes_project 17 34862561 34875570 + Gm20483 antisense antisense MGP_BALBcJ_T0048196.1 MGP_BALBcJ_G0023878.1 mouse_genomes_project 17 56089811 56097916 - MGP_BALBcJ_P0048196 Mydgf protein_coding protein_coding MGP_BALBcJ_T0048197.1 MGP_BALBcJ_G0023878.1 mouse_genomes_project 17 56092175 56097845 - Mydgf protein_coding retained_intron MGP_BALBcJ_T0048198.1 MGP_BALBcJ_G0023878.1 mouse_genomes_project 17 56093381 56097660 - Mydgf protein_coding processed_transcript MGP_BALBcJ_T0013230.1 MGP_BALBcJ_G0011327.1 mouse_genomes_project 17 37331189 37333808 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046956.1 MGP_BALBcJ_G0023517.1 mouse_genomes_project 17 32985710 32989615 - MGP_BALBcJ_P0046956 Ring1 protein_coding protein_coding MGP_BALBcJ_T0046957.1 MGP_BALBcJ_G0023517.1 mouse_genomes_project 17 32986024 32988871 - Ring1 protein_coding retained_intron MGP_BALBcJ_T0046958.1 MGP_BALBcJ_G0023517.1 mouse_genomes_project 17 32989125 32989587 - Ring1 protein_coding retained_intron MGP_BALBcJ_T0102343.1 MGP_BALBcJ_G0040159.1 mouse_genomes_project 17 36065610 36066039 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046255.1 MGP_BALBcJ_G0023353.1 mouse_genomes_project 17 24701551 24705323 - MGP_BALBcJ_P0046255 Nme4 protein_coding protein_coding MGP_BALBcJ_T0046256.1 MGP_BALBcJ_G0023353.1 mouse_genomes_project 17 24703229 24705288 - Nme4 protein_coding retained_intron MGP_BALBcJ_T0006913.1 MGP_BALBcJ_G0005687.1 mouse_genomes_project 17 31148122 31164827 + Gm26549 lincRNA lincRNA MGP_BALBcJ_T0048580.1 MGP_BALBcJ_G0024008.1 mouse_genomes_project 17 79253985 79291196 + MGP_BALBcJ_P0048580 Qpct protein_coding protein_coding MGP_BALBcJ_T0102327.1 MGP_BALBcJ_G0040143.1 mouse_genomes_project 17 35406138 35407930 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047708.1 MGP_BALBcJ_G0023732.1 mouse_genomes_project 17 42558832 42623312 - MGP_BALBcJ_P0047708 Cd2ap protein_coding unknown_likely_coding MGP_BALBcJ_T0010201.1 MGP_BALBcJ_G0008326.1 mouse_genomes_project 17 64365173 64365263 - Gm24194 miRNA miRNA MGP_BALBcJ_T0048068.1 MGP_BALBcJ_G0023832.1 mouse_genomes_project 17 48262251 48269546 + MGP_BALBcJ_P0048068 Treml1 protein_coding protein_coding MGP_BALBcJ_T0048069.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48289313 48311774 - MGP_BALBcJ_P0048069 Nfya protein_coding protein_coding MGP_BALBcJ_T0048070.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48289317 48311915 - MGP_BALBcJ_P0048070 Nfya protein_coding protein_coding MGP_BALBcJ_T0048071.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48289324 48311774 - MGP_BALBcJ_P0048071 Nfya protein_coding protein_coding MGP_BALBcJ_T0048072.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48291433 48302970 - MGP_BALBcJ_P0048072 Nfya protein_coding protein_coding MGP_BALBcJ_T0048073.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48291509 48311739 - MGP_BALBcJ_P0048073 Nfya protein_coding protein_coding MGP_BALBcJ_T0048074.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48291537 48295643 - MGP_BALBcJ_P0048074 Nfya protein_coding protein_coding MGP_BALBcJ_T0048075.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48291652 48295879 - MGP_BALBcJ_P0048075 Nfya protein_coding protein_coding MGP_BALBcJ_T0048076.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48293308 48294574 - Nfya protein_coding retained_intron MGP_BALBcJ_T0048077.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48294444 48301464 - MGP_BALBcJ_P0048077 Nfya protein_coding protein_coding MGP_BALBcJ_T0048078.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48294472 48311750 - MGP_BALBcJ_P0048078 Nfya protein_coding protein_coding MGP_BALBcJ_T0048079.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48295637 48298480 - Nfya protein_coding retained_intron MGP_BALBcJ_T0048080.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48297788 48311697 - Nfya protein_coding retained_intron MGP_BALBcJ_T0048081.1 MGP_BALBcJ_G0023833.1 mouse_genomes_project 17 48300352 48311759 - Nfya protein_coding retained_intron MGP_BALBcJ_T0045462.1 MGP_BALBcJ_G0023106.1 mouse_genomes_project 17 6273970 6299048 + MGP_BALBcJ_P0045462 1700010I14Rik protein_coding protein_coding MGP_BALBcJ_T0045463.1 MGP_BALBcJ_G0023106.1 mouse_genomes_project 17 6273994 6299047 + MGP_BALBcJ_P0045463 1700010I14Rik protein_coding protein_coding MGP_BALBcJ_T0045464.1 MGP_BALBcJ_G0023106.1 mouse_genomes_project 17 6274020 6294941 + 1700010I14Rik protein_coding processed_transcript MGP_BALBcJ_T0010197.1 MGP_BALBcJ_G0008322.1 mouse_genomes_project 17 56158856 56158967 + Mir7b miRNA miRNA MGP_BALBcJ_T0047224.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34104715 34120614 + MGP_BALBcJ_P0047224 Vars protein_coding protein_coding MGP_BALBcJ_T0047225.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34104779 34120322 + MGP_BALBcJ_P0047225 Vars protein_coding protein_coding MGP_BALBcJ_T0047226.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34105045 34108531 + MGP_BALBcJ_P0047226 Vars protein_coding protein_coding MGP_BALBcJ_T0047227.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34106385 34108581 + MGP_BALBcJ_P0047227 Vars protein_coding protein_coding MGP_BALBcJ_T0047228.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34106442 34120614 + Vars protein_coding retained_intron MGP_BALBcJ_T0047229.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34108022 34108790 + Vars protein_coding retained_intron MGP_BALBcJ_T0047230.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34108440 34109058 + Vars protein_coding retained_intron MGP_BALBcJ_T0047231.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34115416 34116601 + Vars protein_coding retained_intron MGP_BALBcJ_T0047232.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34116365 34117284 + Vars protein_coding retained_intron MGP_BALBcJ_T0047233.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34117484 34118671 + Vars protein_coding retained_intron MGP_BALBcJ_T0047234.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34118028 34119249 + MGP_BALBcJ_P0047234 Vars protein_coding protein_coding MGP_BALBcJ_T0047235.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34118037 34119039 + Vars protein_coding retained_intron MGP_BALBcJ_T0047236.1 MGP_BALBcJ_G0023571.1 mouse_genomes_project 17 34119166 34120303 + Vars protein_coding retained_intron MGP_BALBcJ_T0045971.1 MGP_BALBcJ_G0023290.1 mouse_genomes_project 17 23413500 23417036 + MGP_BALBcJ_P0045971 Hagh protein_coding protein_coding MGP_BALBcJ_T0045972.1 MGP_BALBcJ_G0023290.1 mouse_genomes_project 17 23413503 23427052 + MGP_BALBcJ_P0045972 Hagh protein_coding protein_coding MGP_BALBcJ_T0045973.1 MGP_BALBcJ_G0023290.1 mouse_genomes_project 17 23413517 23427055 + MGP_BALBcJ_P0045973 Hagh protein_coding protein_coding MGP_BALBcJ_T0045974.1 MGP_BALBcJ_G0023290.1 mouse_genomes_project 17 23413591 23423841 + MGP_BALBcJ_P0045974 Hagh protein_coding protein_coding MGP_BALBcJ_T0045975.1 MGP_BALBcJ_G0023290.1 mouse_genomes_project 17 23421063 23427209 + Hagh protein_coding processed_transcript MGP_BALBcJ_T0006878.1 MGP_BALBcJ_G0005660.1 mouse_genomes_project 17 12604902 12614373 + Gm28873 lincRNA lincRNA MGP_BALBcJ_T0010203.1 MGP_BALBcJ_G0008328.1 mouse_genomes_project 17 65550528 65550653 + Gm25731 miRNA miRNA MGP_BALBcJ_T0047926.1 MGP_BALBcJ_G0023787.1 mouse_genomes_project 17 46500833 46507172 - MGP_BALBcJ_P0047926 Rrp36 protein_coding protein_coding MGP_BALBcJ_T0048640.1 MGP_BALBcJ_G0024036.1 mouse_genomes_project 17 84064946 84080089 - MGP_BALBcJ_P0048640 Haao protein_coding protein_coding MGP_BALBcJ_T0013216.1 MGP_BALBcJ_G0011313.1 mouse_genomes_project 17 35479052 35479268 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047658.1 MGP_BALBcJ_G0023694.1 mouse_genomes_project 17 37325817 37326935 + MGP_BALBcJ_P0047658 Olfr125 protein_coding protein_coding MGP_BALBcJ_T0102016.1 MGP_BALBcJ_G0039850.1 mouse_genomes_project 17 40641385 40655502 + unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0046175.1 MGP_BALBcJ_G0023337.1 mouse_genomes_project 17 24431611 24434337 - MGP_BALBcJ_P0046175 Stub1 protein_coding protein_coding MGP_BALBcJ_T0006894.1 MGP_BALBcJ_G0005673.1 mouse_genomes_project 17 25507277 25535716 - Gm17382 lincRNA lincRNA MGP_BALBcJ_T0013199.1 MGP_BALBcJ_G0011296.1 mouse_genomes_project 17 26243838 26244107 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048735.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88947704 88981831 + MGP_BALBcJ_P0048735 Ston1 protein_coding protein_coding MGP_BALBcJ_T0048736.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88947716 88992344 + Ston1 protein_coding processed_transcript MGP_BALBcJ_T0048737.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88972554 88996479 + MGP_BALBcJ_P0048737 Ston1 protein_coding protein_coding MGP_BALBcJ_T0048738.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88972554 88992746 + MGP_BALBcJ_P0048738 Ston1 protein_coding protein_coding MGP_BALBcJ_T0048739.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88972608 89010471 + MGP_BALBcJ_P0048739 Ston1 protein_coding protein_coding MGP_BALBcJ_T0048740.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88972832 88983400 + Ston1 protein_coding retained_intron MGP_BALBcJ_T0048741.1 MGP_BALBcJ_G0024072.1 mouse_genomes_project 17 88973363 88983400 + Ston1 protein_coding retained_intron MGP_BALBcJ_T0046534.1 MGP_BALBcJ_G0023416.1 mouse_genomes_project 17 27728175 27733677 - MGP_BALBcJ_P0046534 Pxt1 protein_coding protein_coding MGP_BALBcJ_T0013242.1 MGP_BALBcJ_G0011339.1 mouse_genomes_project 17 46889105 46889558 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048512.1 MGP_BALBcJ_G0023988.1 mouse_genomes_project 17 74605503 74638060 - MGP_BALBcJ_P0048512 Nlrc4 protein_coding protein_coding MGP_BALBcJ_T0047371.1 MGP_BALBcJ_G0023605.1 mouse_genomes_project 17 34775227 34776730 + MGP_BALBcJ_P0047371 2300002M23Rik protein_coding protein_coding MGP_BALBcJ_T0047372.1 MGP_BALBcJ_G0023605.1 mouse_genomes_project 17 34775262 34776708 + 2300002M23Rik protein_coding retained_intron MGP_BALBcJ_T0048014.1 MGP_BALBcJ_G0023818.1 mouse_genomes_project 17 47593126 47601545 + MGP_BALBcJ_P0048014 Pgc protein_coding protein_coding MGP_BALBcJ_T0048015.1 MGP_BALBcJ_G0023818.1 mouse_genomes_project 17 47593128 47599432 + MGP_BALBcJ_P0048015 Pgc protein_coding protein_coding MGP_BALBcJ_T0010154.1 MGP_BALBcJ_G0008279.1 mouse_genomes_project 17 15427856 15427924 + Mir125a miRNA miRNA MGP_BALBcJ_T0048595.1 MGP_BALBcJ_G0024015.1 mouse_genomes_project 17 80356492 80414406 + MGP_BALBcJ_P0048595 Galm protein_coding protein_coding MGP_BALBcJ_T0048596.1 MGP_BALBcJ_G0024015.1 mouse_genomes_project 17 80374027 80412208 + MGP_BALBcJ_P0048596 Galm protein_coding protein_coding MGP_BALBcJ_T0047676.1 MGP_BALBcJ_G0023707.1 mouse_genomes_project 17 37842280 37843219 + MGP_BALBcJ_P0047676 Olfr136 protein_coding protein_coding MGP_BALBcJ_T0006959.1 MGP_BALBcJ_G0005721.1 mouse_genomes_project 17 79087667 79098444 + Gm26637 lincRNA lincRNA MGP_BALBcJ_T0048567.1 MGP_BALBcJ_G0024004.1 mouse_genomes_project 17 79122276 79126101 + MGP_BALBcJ_P0048567 Cebpzos protein_coding protein_coding MGP_BALBcJ_T0048568.1 MGP_BALBcJ_G0024004.1 mouse_genomes_project 17 79122293 79126101 + MGP_BALBcJ_P0048568 Cebpzos protein_coding protein_coding MGP_BALBcJ_T0048569.1 MGP_BALBcJ_G0024004.1 mouse_genomes_project 17 79122476 79124233 + MGP_BALBcJ_P0048569 Cebpzos protein_coding protein_coding MGP_BALBcJ_T0045881.1 MGP_BALBcJ_G0023263.1 mouse_genomes_project 17 22962374 22976552 + MGP_BALBcJ_P0045881 Eci1 protein_coding protein_coding MGP_BALBcJ_T0046890.1 MGP_BALBcJ_G0023503.1 mouse_genomes_project 17 32768277 32775214 + MGP_BALBcJ_P0046890 Cd320 protein_coding protein_coding MGP_BALBcJ_T0046891.1 MGP_BALBcJ_G0023503.1 mouse_genomes_project 17 32768289 32771503 + Cd320 protein_coding retained_intron MGP_BALBcJ_T0046892.1 MGP_BALBcJ_G0023503.1 mouse_genomes_project 17 32768612 32773908 + MGP_BALBcJ_P0046892 Cd320 protein_coding protein_coding MGP_BALBcJ_T0100830.1 MGP_BALBcJ_G0038866.1 mouse_genomes_project 17 23278799 23278933 + Snora64 snoRNA snoRNA MGP_BALBcJ_T0100854.1 MGP_BALBcJ_G0038890.1 mouse_genomes_project 17 92171209 92171339 - Gm24244 snoRNA snoRNA MGP_BALBcJ_T0046991.1 MGP_BALBcJ_G0023522.1 mouse_genomes_project 17 33057659 33060553 + MGP_BALBcJ_P0046991 H2-Oa protein_coding protein_coding MGP_BALBcJ_T0046992.1 MGP_BALBcJ_G0023522.1 mouse_genomes_project 17 33057741 33060552 + H2-Oa protein_coding retained_intron MGP_BALBcJ_T0047415.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047099 35056724 + MGP_BALBcJ_P0047415 Flot1 protein_coding protein_coding MGP_BALBcJ_T0047416.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047216 35056547 + MGP_BALBcJ_P0047416 Flot1 protein_coding protein_coding MGP_BALBcJ_T0047417.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047251 35053877 + MGP_BALBcJ_P0047417 Flot1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047418.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047295 35048271 + Flot1 protein_coding retained_intron MGP_BALBcJ_T0047419.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047395 35049615 + MGP_BALBcJ_P0047419 Flot1 protein_coding protein_coding MGP_BALBcJ_T0047420.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047418 35049627 + MGP_BALBcJ_P0047420 Flot1 protein_coding protein_coding MGP_BALBcJ_T0047421.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047462 35049614 + MGP_BALBcJ_P0047421 Flot1 protein_coding protein_coding MGP_BALBcJ_T0047422.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35047868 35048801 + Flot1 protein_coding retained_intron MGP_BALBcJ_T0047423.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35053938 35056563 + Flot1 protein_coding retained_intron MGP_BALBcJ_T0047424.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35054429 35056577 + Flot1 protein_coding retained_intron MGP_BALBcJ_T0047425.1 MGP_BALBcJ_G0023613.1 mouse_genomes_project 17 35054568 35055400 + Flot1 protein_coding retained_intron MGP_BALBcJ_T0045676.1 MGP_BALBcJ_G0023188.1 mouse_genomes_project 17 19389397 19390387 + MGP_BALBcJ_P0045676 Vmn1r234 protein_coding protein_coding MGP_BALBcJ_T0046688.1 MGP_BALBcJ_G0023453.1 mouse_genomes_project 17 30363213 30374354 + MGP_BALBcJ_P0046688 Ndufv3 protein_coding protein_coding MGP_BALBcJ_T0046689.1 MGP_BALBcJ_G0023453.1 mouse_genomes_project 17 30363248 30370870 + Ndufv3 protein_coding processed_transcript MGP_BALBcJ_T0046690.1 MGP_BALBcJ_G0023453.1 mouse_genomes_project 17 30363256 30374357 + MGP_BALBcJ_P0046690 Ndufv3 protein_coding protein_coding MGP_BALBcJ_T0046691.1 MGP_BALBcJ_G0023453.1 mouse_genomes_project 17 30363283 30370273 + MGP_BALBcJ_P0046691 Ndufv3 protein_coding protein_coding MGP_BALBcJ_T0046692.1 MGP_BALBcJ_G0023453.1 mouse_genomes_project 17 30372123 30374357 + Ndufv3 protein_coding processed_transcript MGP_BALBcJ_T0099575.1 MGP_BALBcJ_G0037611.1 mouse_genomes_project 17 50846877 50846994 - Gm25177 snRNA snRNA MGP_BALBcJ_T0045489.1 MGP_BALBcJ_G0023116.1 mouse_genomes_project 17 9916249 9944075 - MGP_BALBcJ_P0045489 Slc22a1 protein_coding protein_coding MGP_BALBcJ_T0047322.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34283579 34284447 - Aif1 protein_coding retained_intron MGP_BALBcJ_T0047323.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34283579 34285603 - MGP_BALBcJ_P0047323 Aif1 protein_coding protein_coding MGP_BALBcJ_T0047324.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34283580 34288752 - MGP_BALBcJ_P0047324 Aif1 protein_coding protein_coding MGP_BALBcJ_T0047325.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34283582 34286062 - MGP_BALBcJ_P0047325 Aif1 protein_coding protein_coding MGP_BALBcJ_T0047326.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34283584 34288819 - Aif1 protein_coding processed_transcript MGP_BALBcJ_T0047327.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34284111 34285415 - MGP_BALBcJ_P0047327 Aif1 protein_coding protein_coding MGP_BALBcJ_T0047328.1 MGP_BALBcJ_G0023591.1 mouse_genomes_project 17 34285313 34288752 - Aif1 protein_coding retained_intron MGP_BALBcJ_T0046562.1 MGP_BALBcJ_G0023420.1 mouse_genomes_project 17 27890912 27899385 + MGP_BALBcJ_P0046562 Cdkn1a protein_coding protein_coding MGP_BALBcJ_T0046563.1 MGP_BALBcJ_G0023420.1 mouse_genomes_project 17 27893705 27900571 + MGP_BALBcJ_P0046563 Cdkn1a protein_coding protein_coding MGP_BALBcJ_T0046564.1 MGP_BALBcJ_G0023420.1 mouse_genomes_project 17 27898064 27899427 + MGP_BALBcJ_P0046564 Cdkn1a protein_coding protein_coding MGP_BALBcJ_T0013211.1 MGP_BALBcJ_G0011308.1 mouse_genomes_project 17 34767402 34767598 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046472.1 MGP_BALBcJ_G0023402.1 mouse_genomes_project 17 27080164 27099109 - MGP_BALBcJ_P0046472 Tead3 protein_coding protein_coding MGP_BALBcJ_T0046473.1 MGP_BALBcJ_G0023402.1 mouse_genomes_project 17 27080207 27099616 - Tead3 protein_coding retained_intron MGP_BALBcJ_T0046474.1 MGP_BALBcJ_G0023402.1 mouse_genomes_project 17 27081224 27091919 - MGP_BALBcJ_P0046474 Tead3 protein_coding protein_coding MGP_BALBcJ_T0046475.1 MGP_BALBcJ_G0023402.1 mouse_genomes_project 17 27082010 27083920 - Tead3 protein_coding retained_intron MGP_BALBcJ_T0046476.1 MGP_BALBcJ_G0023402.1 mouse_genomes_project 17 27082427 27084849 - Tead3 protein_coding processed_transcript MGP_BALBcJ_T0102335.1 MGP_BALBcJ_G0040151.1 mouse_genomes_project 17 35780068 35782179 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0000975.1 MGP_BALBcJ_G0000904.1 mouse_genomes_project 17 8996479 9002948 - TEC TEC MGP_BALBcJ_T0003727.1 MGP_BALBcJ_G0003356.1 mouse_genomes_project 17 31706446 31718723 + Gm26693 antisense antisense MGP_BALBcJ_T0000994.1 MGP_BALBcJ_G0000922.1 mouse_genomes_project 17 88883440 88883621 + TEC TEC MGP_BALBcJ_T0046558.1 MGP_BALBcJ_G0023419.1 mouse_genomes_project 17 27830233 27841734 + Srsf3 protein_coding retained_intron MGP_BALBcJ_T0046559.1 MGP_BALBcJ_G0023419.1 mouse_genomes_project 17 27830233 27842289 + MGP_BALBcJ_P0046559 Srsf3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046560.1 MGP_BALBcJ_G0023419.1 mouse_genomes_project 17 27830233 27843392 + MGP_BALBcJ_P0046560 Srsf3 protein_coding protein_coding MGP_BALBcJ_T0046561.1 MGP_BALBcJ_G0023419.1 mouse_genomes_project 17 27833924 27839812 + Srsf3 protein_coding retained_intron MGP_BALBcJ_T0013260.1 MGP_BALBcJ_G0011357.1 mouse_genomes_project 17 55921072 55921334 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045665.1 MGP_BALBcJ_G0023183.1 mouse_genomes_project 17 18984002 18984938 - MGP_BALBcJ_P0045665 Vmn1r231 protein_coding protein_coding MGP_BALBcJ_T0045685.1 MGP_BALBcJ_G0023194.1 mouse_genomes_project 17 19622825 19643766 + MGP_BALBcJ_P0045685 Zfp51 protein_coding protein_coding MGP_BALBcJ_T0013263.1 MGP_BALBcJ_G0011360.1 mouse_genomes_project 17 63735773 63736333 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006884.1 MGP_BALBcJ_G0005665.1 mouse_genomes_project 17 19660651 19664353 - Gm26753 lincRNA lincRNA MGP_BALBcJ_T0017510.1 MGP_BALBcJ_G0015278.1 mouse_genomes_project 17 22739593 22752430 + BC028777 processed_transcript processed_transcript MGP_BALBcJ_T0017511.1 MGP_BALBcJ_G0015278.1 mouse_genomes_project 17 22743238 22752615 + BC028777 processed_transcript processed_transcript MGP_BALBcJ_T0102317.1 MGP_BALBcJ_G0040133.1 mouse_genomes_project 17 33557328 33561040 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048104.1 MGP_BALBcJ_G0023840.1 mouse_genomes_project 17 49367581 49478785 - MGP_BALBcJ_P0048104 Daam2 protein_coding protein_coding MGP_BALBcJ_T0048105.1 MGP_BALBcJ_G0023840.1 mouse_genomes_project 17 49387609 49478785 - MGP_BALBcJ_P0048105 Daam2 protein_coding unknown_likely_coding MGP_BALBcJ_T0045409.1 MGP_BALBcJ_G0023089.1 mouse_genomes_project 17 4236747 4243451 - MGP_BALBcJ_P0045409 Tagap1 protein_coding protein_coding MGP_BALBcJ_T0010202.1 MGP_BALBcJ_G0008327.1 mouse_genomes_project 17 64480018 64480120 + Mir6420 miRNA miRNA MGP_BALBcJ_T0048686.1 MGP_BALBcJ_G0024059.1 mouse_genomes_project 17 87410441 87441632 + MGP_BALBcJ_P0048686 Socs5 protein_coding protein_coding MGP_BALBcJ_T0047134.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33924547 33937545 - MGP_BALBcJ_P0047134 Stk19 protein_coding protein_coding MGP_BALBcJ_T0047135.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33924548 33937467 - MGP_BALBcJ_P0047135 Stk19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047136.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33924549 33927006 - Stk19 protein_coding retained_intron MGP_BALBcJ_T0047137.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33924636 33937047 - MGP_BALBcJ_P0047137 Stk19 protein_coding protein_coding MGP_BALBcJ_T0047138.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33924743 33933078 - MGP_BALBcJ_P0047138 Stk19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047139.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33924778 33926325 - Stk19 protein_coding processed_transcript MGP_BALBcJ_T0047140.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33932351 33937527 - Stk19 protein_coding retained_intron MGP_BALBcJ_T0047141.1 MGP_BALBcJ_G0023556.1 mouse_genomes_project 17 33933037 33937354 - Stk19 protein_coding retained_intron MGP_BALBcJ_T0045895.1 MGP_BALBcJ_G0023269.1 mouse_genomes_project 17 23031320 23051850 + MGP_BALBcJ_P0045895 Caskin1 protein_coding protein_coding MGP_BALBcJ_T0046782.1 MGP_BALBcJ_G0023476.1 mouse_genomes_project 17 31712199 31728102 - MGP_BALBcJ_P0046782 Zfp799 protein_coding protein_coding MGP_BALBcJ_T0046783.1 MGP_BALBcJ_G0023476.1 mouse_genomes_project 17 31712205 31719226 - MGP_BALBcJ_P0046783 Zfp799 protein_coding protein_coding MGP_BALBcJ_T0046784.1 MGP_BALBcJ_G0023476.1 mouse_genomes_project 17 31717849 31728069 - MGP_BALBcJ_P0046784 Zfp799 protein_coding protein_coding MGP_BALBcJ_T0046785.1 MGP_BALBcJ_G0023476.1 mouse_genomes_project 17 31718103 31728087 - MGP_BALBcJ_P0046785 Zfp799 protein_coding protein_coding MGP_BALBcJ_T0046786.1 MGP_BALBcJ_G0023476.1 mouse_genomes_project 17 31718467 31728056 - MGP_BALBcJ_P0046786 Zfp799 protein_coding protein_coding MGP_BALBcJ_T0010207.1 MGP_BALBcJ_G0008332.1 mouse_genomes_project 17 90574439 90574545 + Gm24510 miRNA miRNA MGP_BALBcJ_T0047362.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34714788 34731089 + MGP_BALBcJ_P0047362 Cchcr1 protein_coding protein_coding MGP_BALBcJ_T0047363.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34714804 34718796 + Cchcr1 protein_coding retained_intron MGP_BALBcJ_T0047364.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34714864 34731108 + MGP_BALBcJ_P0047364 Cchcr1 protein_coding protein_coding MGP_BALBcJ_T0047365.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34715151 34731098 + MGP_BALBcJ_P0047365 Cchcr1 protein_coding protein_coding MGP_BALBcJ_T0047366.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34718227 34719427 + Cchcr1 protein_coding processed_transcript MGP_BALBcJ_T0047367.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34724771 34725524 + Cchcr1 protein_coding retained_intron MGP_BALBcJ_T0047368.1 MGP_BALBcJ_G0023602.1 mouse_genomes_project 17 34728989 34729526 + Cchcr1 protein_coding retained_intron MGP_BALBcJ_T0010193.1 MGP_BALBcJ_G0008318.1 mouse_genomes_project 17 46044196 46044285 + Mir693 miRNA miRNA MGP_BALBcJ_T0045719.1 MGP_BALBcJ_G0023213.1 mouse_genomes_project 17 21109119 21118356 + MGP_BALBcJ_P0045719 Gm5493 protein_coding protein_coding MGP_BALBcJ_T0100837.1 MGP_BALBcJ_G0038873.1 mouse_genomes_project 17 34366122 34366198 + Gm25128 snoRNA snoRNA MGP_BALBcJ_T0017512.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22939405 22949260 - D330041H03Rik processed_transcript antisense MGP_BALBcJ_T0017513.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22944290 22949344 - D330041H03Rik processed_transcript antisense MGP_BALBcJ_T0017514.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22944306 22949238 - D330041H03Rik processed_transcript antisense MGP_BALBcJ_T0017515.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22946850 22948463 - D330041H03Rik processed_transcript processed_transcript MGP_BALBcJ_T0017516.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22946858 22949364 - D330041H03Rik processed_transcript antisense MGP_BALBcJ_T0017517.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22947266 22949258 - D330041H03Rik processed_transcript retained_intron MGP_BALBcJ_T0017518.1 MGP_BALBcJ_G0015279.1 mouse_genomes_project 17 22947341 22949230 - D330041H03Rik processed_transcript antisense MGP_BALBcJ_T0102362.1 MGP_BALBcJ_G0040178.1 mouse_genomes_project 17 37820099 37821812 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047815.1 MGP_BALBcJ_G0023761.1 mouse_genomes_project 17 45527211 45528192 - MGP_BALBcJ_P0047815 1600014C23Rik protein_coding protein_coding MGP_BALBcJ_T0047670.1 MGP_BALBcJ_G0023704.1 mouse_genomes_project 17 37714761 37715840 + MGP_BALBcJ_P0047670 Olfr135 protein_coding protein_coding MGP_BALBcJ_T0048506.1 MGP_BALBcJ_G0023984.1 mouse_genomes_project 17 74368887 74469040 - MGP_BALBcJ_P0048506 Memo1 protein_coding unknown_likely_coding MGP_BALBcJ_T0045890.1 MGP_BALBcJ_G0023266.1 mouse_genomes_project 17 23011676 23012795 + MGP_BALBcJ_P0045890 Pgp protein_coding protein_coding MGP_BALBcJ_T0013217.1 MGP_BALBcJ_G0011314.1 mouse_genomes_project 17 35529299 35529542 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098342.1 MGP_BALBcJ_G0036396.1 mouse_genomes_project 17 78363914 78364272 - pseudogene pseudogene MGP_BALBcJ_T0048115.1 MGP_BALBcJ_G0023843.1 mouse_genomes_project 17 50202697 50216893 - MGP_BALBcJ_P0048115 Dazl protein_coding protein_coding MGP_BALBcJ_T0048116.1 MGP_BALBcJ_G0023843.1 mouse_genomes_project 17 50204549 50216240 - MGP_BALBcJ_P0048116 Dazl protein_coding unknown_likely_coding MGP_BALBcJ_T0045466.1 MGP_BALBcJ_G0023108.1 mouse_genomes_project 17 7487981 7564947 - MGP_BALBcJ_P0045466 Qk protein_coding protein_coding MGP_BALBcJ_T0045467.1 MGP_BALBcJ_G0023108.1 mouse_genomes_project 17 7491687 7567784 - MGP_BALBcJ_P0045467 Qk protein_coding protein_coding MGP_BALBcJ_T0045611.1 MGP_BALBcJ_G0023146.1 mouse_genomes_project 17 14991831 15052475 + MGP_BALBcJ_P0045611 Lix1 protein_coding protein_coding MGP_BALBcJ_T0045612.1 MGP_BALBcJ_G0023146.1 mouse_genomes_project 17 15041552 15052475 + Lix1 protein_coding processed_transcript MGP_BALBcJ_T0047650.1 MGP_BALBcJ_G0023686.1 mouse_genomes_project 17 37122156 37124823 - MGP_BALBcJ_P0047650 protein_coding protein_coding MGP_BALBcJ_T0047671.1 MGP_BALBcJ_G0023705.1 mouse_genomes_project 17 37770815 37780700 + MGP_BALBcJ_P0047671 Olfr138 protein_coding protein_coding MGP_BALBcJ_T0047672.1 MGP_BALBcJ_G0023705.1 mouse_genomes_project 17 37770816 37781560 + MGP_BALBcJ_P0047672 Olfr138 protein_coding protein_coding MGP_BALBcJ_T0047673.1 MGP_BALBcJ_G0023705.1 mouse_genomes_project 17 37770826 37780990 + MGP_BALBcJ_P0047673 Olfr138 protein_coding protein_coding MGP_BALBcJ_T0047674.1 MGP_BALBcJ_G0023705.1 mouse_genomes_project 17 37780621 37781560 + MGP_BALBcJ_P0047674 Olfr138 protein_coding protein_coding MGP_BALBcJ_T0003763.1 MGP_BALBcJ_G0003384.1 mouse_genomes_project 17 57004865 57010588 + Gm17168 antisense antisense MGP_BALBcJ_T0046510.1 MGP_BALBcJ_G0023411.1 mouse_genomes_project 17 27462693 27521048 + MGP_BALBcJ_P0046510 Mapk14 protein_coding protein_coding MGP_BALBcJ_T0046511.1 MGP_BALBcJ_G0023411.1 mouse_genomes_project 17 27462693 27513808 + MGP_BALBcJ_P0046511 Mapk14 protein_coding protein_coding MGP_BALBcJ_T0046512.1 MGP_BALBcJ_G0023411.1 mouse_genomes_project 17 27462693 27521048 + MGP_BALBcJ_P0046512 Mapk14 protein_coding protein_coding MGP_BALBcJ_T0046513.1 MGP_BALBcJ_G0023411.1 mouse_genomes_project 17 27462791 27500004 + MGP_BALBcJ_P0046513 Mapk14 protein_coding protein_coding MGP_BALBcJ_T0046514.1 MGP_BALBcJ_G0023411.1 mouse_genomes_project 17 27463091 27521053 + MGP_BALBcJ_P0046514 Mapk14 protein_coding protein_coding MGP_BALBcJ_T0046515.1 MGP_BALBcJ_G0023411.1 mouse_genomes_project 17 27514262 27519001 + Mapk14 protein_coding retained_intron MGP_BALBcJ_T0099556.1 MGP_BALBcJ_G0037592.1 mouse_genomes_project 17 11024504 11024611 + Gm24867 snRNA snRNA MGP_BALBcJ_T0010192.1 MGP_BALBcJ_G0008317.1 mouse_genomes_project 17 39047804 39047914 - Gm26429 miRNA miRNA MGP_BALBcJ_T0045609.1 MGP_BALBcJ_G0023145.1 mouse_genomes_project 17 13361235 13382132 - MGP_BALBcJ_P0045609 Rgmb protein_coding protein_coding MGP_BALBcJ_T0047262.1 MGP_BALBcJ_G0023578.1 mouse_genomes_project 17 34175433 34179665 + MGP_BALBcJ_P0047262 Ly6g6c protein_coding protein_coding MGP_BALBcJ_T0047263.1 MGP_BALBcJ_G0023578.1 mouse_genomes_project 17 34177361 34180080 + MGP_BALBcJ_P0047263 Ly6g6c protein_coding protein_coding MGP_BALBcJ_T0047264.1 MGP_BALBcJ_G0023578.1 mouse_genomes_project 17 34177426 34179574 + MGP_BALBcJ_P0047264 Ly6g6c protein_coding protein_coding MGP_BALBcJ_T0098536.1 MGP_BALBcJ_G0036590.1 mouse_genomes_project 17 29895561 29895689 + Gm25447 rRNA rRNA MGP_BALBcJ_T0046649.1 MGP_BALBcJ_G0023443.1 mouse_genomes_project 17 29893651 29952718 + MGP_BALBcJ_P0046649 Abcg1 protein_coding protein_coding MGP_BALBcJ_T0046650.1 MGP_BALBcJ_G0023443.1 mouse_genomes_project 17 29893727 29936048 + Abcg1 protein_coding retained_intron MGP_BALBcJ_T0098538.1 MGP_BALBcJ_G0036592.1 mouse_genomes_project 17 44426153 44426272 - n-R5s27 rRNA rRNA MGP_BALBcJ_T0047576.1 MGP_BALBcJ_G0023653.1 mouse_genomes_project 17 36370277 36373660 - MGP_BALBcJ_P0047576 Ppp1r11 protein_coding protein_coding MGP_BALBcJ_T0047577.1 MGP_BALBcJ_G0023653.1 mouse_genomes_project 17 36371236 36373688 - MGP_BALBcJ_P0047577 Ppp1r11 protein_coding protein_coding MGP_BALBcJ_T0047578.1 MGP_BALBcJ_G0023653.1 mouse_genomes_project 17 36371301 36373285 - MGP_BALBcJ_P0047578 Ppp1r11 protein_coding protein_coding MGP_BALBcJ_T0003757.1 MGP_BALBcJ_G0003380.1 mouse_genomes_project 17 47564997 47567023 - Frs3os antisense antisense MGP_BALBcJ_T0003758.1 MGP_BALBcJ_G0003380.1 mouse_genomes_project 17 47565066 47565856 - Frs3os antisense antisense MGP_BALBcJ_T0003759.1 MGP_BALBcJ_G0003380.1 mouse_genomes_project 17 47565349 47567006 - Frs3os antisense antisense MGP_BALBcJ_T0046708.1 MGP_BALBcJ_G0023456.1 mouse_genomes_project 17 30522078 30525874 + MGP_BALBcJ_P0046708 Cryaa protein_coding protein_coding MGP_BALBcJ_T0047728.1 MGP_BALBcJ_G0023740.1 mouse_genomes_project 17 43429385 43454457 - MGP_BALBcJ_P0047728 Slc25a27 protein_coding protein_coding MGP_BALBcJ_T0013189.1 MGP_BALBcJ_G0011286.1 mouse_genomes_project 17 12417409 12418148 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045519.1 MGP_BALBcJ_G0023124.1 mouse_genomes_project 17 10233972 10252635 - MGP_BALBcJ_P0045519 Acat2 protein_coding protein_coding MGP_BALBcJ_T0045520.1 MGP_BALBcJ_G0023124.1 mouse_genomes_project 17 10235669 10249226 - Acat2 protein_coding processed_transcript MGP_BALBcJ_T0003769.1 MGP_BALBcJ_G0003388.1 mouse_genomes_project 17 70938148 70939529 + Gm20703 antisense antisense MGP_BALBcJ_T0045725.1 MGP_BALBcJ_G0023215.1 mouse_genomes_project 17 21433315 21453256 + MGP_BALBcJ_P0045725 protein_coding protein_coding MGP_BALBcJ_T0045678.1 MGP_BALBcJ_G0023190.1 mouse_genomes_project 17 19464174 19465295 + MGP_BALBcJ_P0045678 Vmn1r236 protein_coding protein_coding MGP_BALBcJ_T0047702.1 MGP_BALBcJ_G0023729.1 mouse_genomes_project 17 42329605 42385211 - MGP_BALBcJ_P0047702 Opn5 protein_coding protein_coding MGP_BALBcJ_T0045368.1 MGP_BALBcJ_G0023077.1 mouse_genomes_project 17 2451371 2480926 - MGP_BALBcJ_P0045368 Tmem242 protein_coding protein_coding MGP_BALBcJ_T0045370.1 MGP_BALBcJ_G0023077.1 mouse_genomes_project 17 2472977 2480942 - MGP_BALBcJ_P0045370 Tmem242 protein_coding protein_coding MGP_BALBcJ_T0045371.1 MGP_BALBcJ_G0023077.1 mouse_genomes_project 17 2473707 2480939 - MGP_BALBcJ_P0045371 Tmem242 protein_coding protein_coding MGP_BALBcJ_T0048393.1 MGP_BALBcJ_G0023952.1 mouse_genomes_project 17 67958112 68124893 - MGP_BALBcJ_P0048393 Arhgap28 protein_coding protein_coding MGP_BALBcJ_T0048394.1 MGP_BALBcJ_G0023952.1 mouse_genomes_project 17 67961134 68020087 - MGP_BALBcJ_P0048394 Arhgap28 protein_coding protein_coding MGP_BALBcJ_T0048395.1 MGP_BALBcJ_G0023952.1 mouse_genomes_project 17 67976739 67992760 - MGP_BALBcJ_P0048395 Arhgap28 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048396.1 MGP_BALBcJ_G0023952.1 mouse_genomes_project 17 67988676 68014764 - MGP_BALBcJ_P0048396 Arhgap28 protein_coding protein_coding MGP_BALBcJ_T0098537.1 MGP_BALBcJ_G0036591.1 mouse_genomes_project 17 31701172 31701283 - Gm25555 rRNA rRNA MGP_BALBcJ_T0045893.1 MGP_BALBcJ_G0023268.1 mouse_genomes_project 17 23015085 23016671 + MGP_BALBcJ_P0045893 Bricd5 protein_coding protein_coding MGP_BALBcJ_T0045894.1 MGP_BALBcJ_G0023268.1 mouse_genomes_project 17 23015168 23016589 + MGP_BALBcJ_P0045894 Bricd5 protein_coding protein_coding MGP_BALBcJ_T0010195.1 MGP_BALBcJ_G0008320.1 mouse_genomes_project 17 49012645 49012790 - Gm44304 miRNA miRNA MGP_BALBcJ_T0102291.1 MGP_BALBcJ_G0040107.1 mouse_genomes_project 17 18510619 18511471 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048491.1 MGP_BALBcJ_G0023976.1 mouse_genomes_project 17 73074855 73098745 + MGP_BALBcJ_P0048491 Lbh protein_coding protein_coding MGP_BALBcJ_T0048492.1 MGP_BALBcJ_G0023976.1 mouse_genomes_project 17 73077755 73095879 + MGP_BALBcJ_P0048492 Lbh protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046932.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907254 32907943 - Rps18 protein_coding retained_intron MGP_BALBcJ_T0046933.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907254 32910528 - Rps18 protein_coding processed_transcript MGP_BALBcJ_T0046934.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907254 32910979 - MGP_BALBcJ_P0046934 Rps18 protein_coding protein_coding MGP_BALBcJ_T0046935.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907254 32911033 - MGP_BALBcJ_P0046935 Rps18 protein_coding protein_coding MGP_BALBcJ_T0046936.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907255 32910976 - Rps18 protein_coding retained_intron MGP_BALBcJ_T0046937.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907255 32909797 - Rps18 protein_coding processed_transcript MGP_BALBcJ_T0046938.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907259 32907795 - Rps18 protein_coding retained_intron MGP_BALBcJ_T0046939.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32907524 32910969 - Rps18 protein_coding retained_intron MGP_BALBcJ_T0046940.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32910140 32910976 - Rps18 protein_coding retained_intron MGP_BALBcJ_T0046941.1 MGP_BALBcJ_G0023512.1 mouse_genomes_project 17 32910834 32911317 - Rps18 protein_coding processed_transcript MGP_BALBcJ_T0046414.1 MGP_BALBcJ_G0023392.1 mouse_genomes_project 17 26596118 26640681 + MGP_BALBcJ_P0046414 Uhrf1bp1 protein_coding protein_coding MGP_BALBcJ_T0046415.1 MGP_BALBcJ_G0023392.1 mouse_genomes_project 17 26596871 26620298 + Uhrf1bp1 protein_coding processed_transcript MGP_BALBcJ_T0046416.1 MGP_BALBcJ_G0023392.1 mouse_genomes_project 17 26630685 26635947 + Uhrf1bp1 protein_coding processed_transcript MGP_BALBcJ_T0047762.1 MGP_BALBcJ_G0023752.1 mouse_genomes_project 17 45333639 45341279 - MGP_BALBcJ_P0047762 Tmem151b protein_coding protein_coding MGP_BALBcJ_T0047698.1 MGP_BALBcJ_G0023725.1 mouse_genomes_project 17 40694387 40704971 - MGP_BALBcJ_P0047698 Glyatl3 protein_coding protein_coding MGP_BALBcJ_T0045934.1 MGP_BALBcJ_G0023276.1 mouse_genomes_project 17 23201807 23202944 - MGP_BALBcJ_P0045934 Npw protein_coding protein_coding MGP_BALBcJ_T0102283.1 MGP_BALBcJ_G0040099.1 mouse_genomes_project 17 17484147 17485345 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047515.1 MGP_BALBcJ_G0023628.1 mouse_genomes_project 17 35279370 35387947 - protein_coding retained_intron MGP_BALBcJ_T0046334.1 MGP_BALBcJ_G0023371.1 mouse_genomes_project 17 25485973 25488873 - MGP_BALBcJ_P0046334 Nkx2-5 protein_coding protein_coding MGP_BALBcJ_T0013255.1 MGP_BALBcJ_G0011352.1 mouse_genomes_project 17 53807509 53807855 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048152.1 MGP_BALBcJ_G0023856.1 mouse_genomes_project 17 54252843 54255279 - MGP_BALBcJ_P0048152 Armcx3 protein_coding protein_coding MGP_BALBcJ_T0048510.1 MGP_BALBcJ_G0023987.1 mouse_genomes_project 17 74573432 74602673 + MGP_BALBcJ_P0048510 Slc30a6 protein_coding protein_coding MGP_BALBcJ_T0048511.1 MGP_BALBcJ_G0023987.1 mouse_genomes_project 17 74573432 74602673 + MGP_BALBcJ_P0048511 Slc30a6 protein_coding protein_coding MGP_BALBcJ_T0010173.1 MGP_BALBcJ_G0008298.1 mouse_genomes_project 17 27281370 27281496 + Gm25195 miRNA miRNA MGP_BALBcJ_T0048136.1 MGP_BALBcJ_G0023848.1 mouse_genomes_project 17 53288206 53351926 - MGP_BALBcJ_P0048136 Efhb protein_coding protein_coding MGP_BALBcJ_T0048049.1 MGP_BALBcJ_G0023823.1 mouse_genomes_project 17 47968202 47969471 + MGP_BALBcJ_P0048049 1700067P10Rik protein_coding protein_coding MGP_BALBcJ_T0047946.1 MGP_BALBcJ_G0023798.1 mouse_genomes_project 17 46730342 46731532 - MGP_BALBcJ_P0047946 A330017A19Rik protein_coding protein_coding MGP_BALBcJ_T0048292.1 MGP_BALBcJ_G0023913.1 mouse_genomes_project 17 57044594 57052157 - MGP_BALBcJ_P0048292 Tubb4a protein_coding protein_coding MGP_BALBcJ_T0000982.1 MGP_BALBcJ_G0000910.1 mouse_genomes_project 17 51696738 51701517 - TEC TEC MGP_BALBcJ_T0011414.1 MGP_BALBcJ_G0009539.1 mouse_genomes_project 17 80425777 80426024 - Gm25706 misc_RNA misc_RNA MGP_BALBcJ_T0046796.1 MGP_BALBcJ_G0023480.1 mouse_genomes_project 17 31862707 31874574 + MGP_BALBcJ_P0046796 Zfp472 protein_coding protein_coding MGP_BALBcJ_T0047567.1 MGP_BALBcJ_G0023649.1 mouse_genomes_project 17 36289986 36298242 + MGP_BALBcJ_P0047567 Trim10 protein_coding protein_coding MGP_BALBcJ_T0010170.1 MGP_BALBcJ_G0008295.1 mouse_genomes_project 17 26032085 26032161 + Mir7216 miRNA miRNA MGP_BALBcJ_T0000988.1 MGP_BALBcJ_G0000916.1 mouse_genomes_project 17 51788951 51793031 + TEC TEC MGP_BALBcJ_T0099557.1 MGP_BALBcJ_G0037593.1 mouse_genomes_project 17 12258997 12259061 - Gm23352 snRNA snRNA MGP_BALBcJ_T0046180.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24439433 24445822 - MGP_BALBcJ_P0046180 Rhot2 protein_coding protein_coding MGP_BALBcJ_T0046181.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24439814 24442125 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046182.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24439816 24445434 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046183.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24440250 24441576 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046184.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24441030 24442639 - Rhot2 protein_coding processed_transcript MGP_BALBcJ_T0046185.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442232 24443031 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046186.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442313 24444114 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046187.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442362 24443083 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046188.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442536 24445277 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046189.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442544 24444120 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046190.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442581 24445289 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046191.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24442736 24445388 - MGP_BALBcJ_P0046191 Rhot2 protein_coding protein_coding MGP_BALBcJ_T0046192.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24443072 24445417 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0046193.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24443228 24445496 - MGP_BALBcJ_P0046193 Rhot2 protein_coding protein_coding MGP_BALBcJ_T0046194.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24443232 24445540 - Rhot2 protein_coding processed_transcript MGP_BALBcJ_T0046195.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24443358 24445513 - Rhot2 protein_coding processed_transcript MGP_BALBcJ_T0046196.1 MGP_BALBcJ_G0023340.1 mouse_genomes_project 17 24444745 24445501 - Rhot2 protein_coding retained_intron MGP_BALBcJ_T0011399.1 MGP_BALBcJ_G0009524.1 mouse_genomes_project 17 27199634 27199922 + Gm22146 misc_RNA misc_RNA MGP_BALBcJ_T0010169.1 MGP_BALBcJ_G0008294.1 mouse_genomes_project 17 26016818 26016879 - Mir7214 miRNA miRNA MGP_BALBcJ_T0047430.1 MGP_BALBcJ_G0023615.1 mouse_genomes_project 17 35065722 35083624 + MGP_BALBcJ_P0047430 Mdc1 protein_coding protein_coding MGP_BALBcJ_T0047431.1 MGP_BALBcJ_G0023615.1 mouse_genomes_project 17 35065866 35083630 + MGP_BALBcJ_P0047431 Mdc1 protein_coding unknown_likely_coding MGP_BALBcJ_T0047432.1 MGP_BALBcJ_G0023615.1 mouse_genomes_project 17 35065883 35070208 + MGP_BALBcJ_P0047432 Mdc1 protein_coding protein_coding MGP_BALBcJ_T0045936.1 MGP_BALBcJ_G0023278.1 mouse_genomes_project 17 23233204 23240563 - MGP_BALBcJ_P0045936 Syngr3 protein_coding protein_coding MGP_BALBcJ_T0045937.1 MGP_BALBcJ_G0023278.1 mouse_genomes_project 17 23234747 23238810 - Syngr3 protein_coding processed_transcript MGP_BALBcJ_T0010190.1 MGP_BALBcJ_G0008315.1 mouse_genomes_project 17 35148800 35148881 + Mir1894 miRNA miRNA MGP_BALBcJ_T0099586.1 MGP_BALBcJ_G0037622.1 mouse_genomes_project 17 84526322 84526708 - Gm24492 snRNA snRNA MGP_BALBcJ_T0047919.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46482790 46497362 + MGP_BALBcJ_P0047919 Cul7 protein_coding protein_coding MGP_BALBcJ_T0047920.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46483016 46487301 + Cul7 protein_coding retained_intron MGP_BALBcJ_T0047921.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46483025 46490089 + Cul7 protein_coding retained_intron MGP_BALBcJ_T0047922.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46483876 46497362 + MGP_BALBcJ_P0047922 Cul7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047923.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46485304 46488660 + Cul7 protein_coding processed_transcript MGP_BALBcJ_T0047924.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46485346 46497362 + MGP_BALBcJ_P0047924 Cul7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047925.1 MGP_BALBcJ_G0023786.1 mouse_genomes_project 17 46494789 46497362 + Cul7 protein_coding retained_intron MGP_BALBcJ_T0047657.1 MGP_BALBcJ_G0023693.1 mouse_genomes_project 17 37308849 37309971 + MGP_BALBcJ_P0047657 Olfr124 protein_coding protein_coding MGP_BALBcJ_T0000973.1 MGP_BALBcJ_G0000902.1 mouse_genomes_project 17 8525321 8530321 + TEC TEC MGP_BALBcJ_T0013267.1 MGP_BALBcJ_G0011364.1 mouse_genomes_project 17 72853756 72854697 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045664.1 MGP_BALBcJ_G0023182.1 mouse_genomes_project 17 18941559 18942510 + MGP_BALBcJ_P0045664 Vmn1r230 protein_coding protein_coding MGP_BALBcJ_T0045646.1 MGP_BALBcJ_G0023164.1 mouse_genomes_project 17 17535349 17568030 + MGP_BALBcJ_P0045646 Vmn2r100 protein_coding protein_coding MGP_BALBcJ_T0046424.1 MGP_BALBcJ_G0023395.1 mouse_genomes_project 17 26807776 26821898 - MGP_BALBcJ_P0046424 Tcp11 protein_coding protein_coding MGP_BALBcJ_T0046425.1 MGP_BALBcJ_G0023395.1 mouse_genomes_project 17 26807777 26821953 - MGP_BALBcJ_P0046425 Tcp11 protein_coding protein_coding MGP_BALBcJ_T0046426.1 MGP_BALBcJ_G0023395.1 mouse_genomes_project 17 26807780 26821881 - MGP_BALBcJ_P0046426 Tcp11 protein_coding protein_coding MGP_BALBcJ_T0046427.1 MGP_BALBcJ_G0023395.1 mouse_genomes_project 17 26807826 26809506 - Tcp11 protein_coding processed_transcript MGP_BALBcJ_T0046428.1 MGP_BALBcJ_G0023395.1 mouse_genomes_project 17 26810662 26821953 - MGP_BALBcJ_P0046428 Tcp11 protein_coding protein_coding MGP_BALBcJ_T0046429.1 MGP_BALBcJ_G0023395.1 mouse_genomes_project 17 26815718 26821915 - MGP_BALBcJ_P0046429 Tcp11 protein_coding protein_coding MGP_BALBcJ_T0102287.1 MGP_BALBcJ_G0040103.1 mouse_genomes_project 17 18021158 18022089 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045693.1 MGP_BALBcJ_G0023202.1 mouse_genomes_project 17 19912587 19914989 + Zfp229 protein_coding processed_transcript MGP_BALBcJ_T0045694.1 MGP_BALBcJ_G0023202.1 mouse_genomes_project 17 19912620 19913825 + Zfp229 protein_coding processed_transcript MGP_BALBcJ_T0045695.1 MGP_BALBcJ_G0023202.1 mouse_genomes_project 17 19912631 19927657 + MGP_BALBcJ_P0045695 Zfp229 protein_coding protein_coding MGP_BALBcJ_T0045696.1 MGP_BALBcJ_G0023202.1 mouse_genomes_project 17 19912631 19948998 + MGP_BALBcJ_P0045696 Zfp229 protein_coding protein_coding MGP_BALBcJ_T0045697.1 MGP_BALBcJ_G0023202.1 mouse_genomes_project 17 19914819 19927658 + MGP_BALBcJ_P0045697 Zfp229 protein_coding protein_coding MGP_BALBcJ_T0048166.1 MGP_BALBcJ_G0023866.1 mouse_genomes_project 17 55892302 55903051 + MGP_BALBcJ_P0048166 Fsd1 protein_coding protein_coding MGP_BALBcJ_T0047543.1 MGP_BALBcJ_G0023639.1 mouse_genomes_project 17 35667527 35670825 - MGP_BALBcJ_P0047543 H2-M10.1 protein_coding protein_coding MGP_BALBcJ_T0047544.1 MGP_BALBcJ_G0023639.1 mouse_genomes_project 17 35667870 35670855 - MGP_BALBcJ_P0047544 H2-M10.1 protein_coding protein_coding MGP_BALBcJ_T0045814.1 MGP_BALBcJ_G0023248.1 mouse_genomes_project 17 22502171 22505272 - MGP_BALBcJ_P0045814 Prss30 protein_coding protein_coding MGP_BALBcJ_T0045815.1 MGP_BALBcJ_G0023248.1 mouse_genomes_project 17 22502884 22504843 - MGP_BALBcJ_P0045815 Prss30 protein_coding protein_coding MGP_BALBcJ_T0045816.1 MGP_BALBcJ_G0023248.1 mouse_genomes_project 17 22503111 22505216 - Prss30 protein_coding retained_intron MGP_BALBcJ_T0045817.1 MGP_BALBcJ_G0023248.1 mouse_genomes_project 17 22503135 22504722 - MGP_BALBcJ_P0045817 Prss30 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045818.1 MGP_BALBcJ_G0023248.1 mouse_genomes_project 17 22503711 22505240 - MGP_BALBcJ_P0045818 Prss30 protein_coding protein_coding MGP_BALBcJ_T0047690.1 MGP_BALBcJ_G0023721.1 mouse_genomes_project 17 40517255 40521718 + MGP_BALBcJ_P0047690 Esp1 protein_coding protein_coding MGP_BALBcJ_T0013176.1 MGP_BALBcJ_G0011273.1 mouse_genomes_project 17 7639 8074 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046350.1 MGP_BALBcJ_G0023376.1 mouse_genomes_project 17 25647636 25720586 + MGP_BALBcJ_P0046350 Ggnbp1 protein_coding protein_coding MGP_BALBcJ_T0046351.1 MGP_BALBcJ_G0023376.1 mouse_genomes_project 17 25702070 25711059 + Ggnbp1 protein_coding retained_intron MGP_BALBcJ_T0046352.1 MGP_BALBcJ_G0023376.1 mouse_genomes_project 17 25702081 25720586 + MGP_BALBcJ_P0046352 Ggnbp1 protein_coding protein_coding MGP_BALBcJ_T0046353.1 MGP_BALBcJ_G0023376.1 mouse_genomes_project 17 25702097 25706911 + Ggnbp1 protein_coding processed_transcript MGP_BALBcJ_T0046358.1 MGP_BALBcJ_G0023376.1 mouse_genomes_project 17 25713509 25720586 + MGP_BALBcJ_P0046358 Ggnbp1 protein_coding protein_coding MGP_BALBcJ_T0046359.1 MGP_BALBcJ_G0023376.1 mouse_genomes_project 17 25714611 25719014 + Ggnbp1 protein_coding retained_intron MGP_BALBcJ_T0045801.1 MGP_BALBcJ_G0023242.1 mouse_genomes_project 17 22348764 22353793 + MGP_BALBcJ_P0045801 Prss21 protein_coding protein_coding MGP_BALBcJ_T0013264.1 MGP_BALBcJ_G0011361.1 mouse_genomes_project 17 67965624 67966562 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048642.1 MGP_BALBcJ_G0024038.1 mouse_genomes_project 17 84428884 84702993 - MGP_BALBcJ_P0048642 Thada protein_coding protein_coding MGP_BALBcJ_T0046209.1 MGP_BALBcJ_G0023343.1 mouse_genomes_project 17 24476905 24478602 + MGP_BALBcJ_P0046209 Mettl26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046210.1 MGP_BALBcJ_G0023343.1 mouse_genomes_project 17 24476941 24478611 + MGP_BALBcJ_P0046210 Mettl26 protein_coding protein_coding MGP_BALBcJ_T0046211.1 MGP_BALBcJ_G0023343.1 mouse_genomes_project 17 24476942 24478611 + MGP_BALBcJ_P0046211 Mettl26 protein_coding protein_coding MGP_BALBcJ_T0046212.1 MGP_BALBcJ_G0023343.1 mouse_genomes_project 17 24476971 24487426 + MGP_BALBcJ_P0046212 Mettl26 protein_coding protein_coding MGP_BALBcJ_T0046213.1 MGP_BALBcJ_G0023343.1 mouse_genomes_project 17 24476971 24478439 + MGP_BALBcJ_P0046213 Mettl26 protein_coding protein_coding MGP_BALBcJ_T0003740.1 MGP_BALBcJ_G0003366.1 mouse_genomes_project 17 34921533 34925946 + Gm4577 antisense antisense MGP_BALBcJ_T0011420.1 MGP_BALBcJ_G0009545.1 mouse_genomes_project 17 85869632 85869831 + Gm27502 misc_RNA misc_RNA MGP_BALBcJ_T0047680.1 MGP_BALBcJ_G0023711.1 mouse_genomes_project 17 38610202 38613546 - MGP_BALBcJ_P0047680 Esp23 protein_coding protein_coding MGP_BALBcJ_T0048186.1 MGP_BALBcJ_G0023872.1 mouse_genomes_project 17 55991316 56015224 + MGP_BALBcJ_P0048186 Hdgfrp2 protein_coding protein_coding MGP_BALBcJ_T0048187.1 MGP_BALBcJ_G0023872.1 mouse_genomes_project 17 55991414 56015233 + MGP_BALBcJ_P0048187 Hdgfrp2 protein_coding unknown_likely_coding MGP_BALBcJ_T0047665.1 MGP_BALBcJ_G0023700.1 mouse_genomes_project 17 37585539 37592263 - MGP_BALBcJ_P0047665 Olfr131 protein_coding protein_coding MGP_BALBcJ_T0047666.1 MGP_BALBcJ_G0023700.1 mouse_genomes_project 17 37585539 37586569 - MGP_BALBcJ_P0047666 Olfr131 protein_coding protein_coding MGP_BALBcJ_T0013187.1 MGP_BALBcJ_G0011284.1 mouse_genomes_project 17 10555537 10556037 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048314.1 MGP_BALBcJ_G0023926.1 mouse_genomes_project 17 58815555 58820702 - Pdzph1 protein_coding retained_intron MGP_BALBcJ_T0048315.1 MGP_BALBcJ_G0023926.1 mouse_genomes_project 17 58815555 58932482 - MGP_BALBcJ_P0048315 Pdzph1 protein_coding protein_coding MGP_BALBcJ_T0048316.1 MGP_BALBcJ_G0023926.1 mouse_genomes_project 17 58815717 58830064 - MGP_BALBcJ_P0048316 Pdzph1 protein_coding protein_coding MGP_BALBcJ_T0013272.1 MGP_BALBcJ_G0011369.1 mouse_genomes_project 17 79050334 79051499 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045962.1 MGP_BALBcJ_G0023285.1 mouse_genomes_project 17 23289744 23300068 + MGP_BALBcJ_P0045962 Rpl3l protein_coding unknown_likely_coding MGP_BALBcJ_T0045963.1 MGP_BALBcJ_G0023285.1 mouse_genomes_project 17 23289915 23300063 + MGP_BALBcJ_P0045963 Rpl3l protein_coding protein_coding MGP_BALBcJ_T0045964.1 MGP_BALBcJ_G0023285.1 mouse_genomes_project 17 23290269 23297289 + MGP_BALBcJ_P0045964 Rpl3l protein_coding protein_coding MGP_BALBcJ_T0045965.1 MGP_BALBcJ_G0023285.1 mouse_genomes_project 17 23296608 23300063 + MGP_BALBcJ_P0045965 Rpl3l protein_coding protein_coding MGP_BALBcJ_T0048062.1 MGP_BALBcJ_G0023830.1 mouse_genomes_project 17 48218941 48226777 + MGP_BALBcJ_P0048062 protein_coding protein_coding MGP_BALBcJ_T0048063.1 MGP_BALBcJ_G0023830.1 mouse_genomes_project 17 48218941 48225278 + MGP_BALBcJ_P0048063 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047180.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33963122 33982647 - MGP_BALBcJ_P0047180 C2 protein_coding protein_coding MGP_BALBcJ_T0047181.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33963123 33982721 - MGP_BALBcJ_P0047181 C2 protein_coding protein_coding MGP_BALBcJ_T0047182.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33963124 33995946 - MGP_BALBcJ_P0047182 C2 protein_coding protein_coding MGP_BALBcJ_T0047183.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33964187 33964928 - MGP_BALBcJ_P0047183 C2 protein_coding protein_coding MGP_BALBcJ_T0047184.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33964684 33965468 - C2 protein_coding retained_intron MGP_BALBcJ_T0047185.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33977662 33982588 - C2 protein_coding processed_transcript MGP_BALBcJ_T0047187.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33993828 33995956 - C2 protein_coding processed_transcript MGP_BALBcJ_T0047188.1 MGP_BALBcJ_G0023562.1 mouse_genomes_project 17 33993831 33998677 - C2 protein_coding processed_transcript MGP_BALBcJ_T0046338.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25613287 25646854 + MGP_BALBcJ_P0046338 Syngap1 protein_coding protein_coding MGP_BALBcJ_T0046339.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25613476 25645000 + MGP_BALBcJ_P0046339 Syngap1 protein_coding protein_coding MGP_BALBcJ_T0046340.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25613486 25644960 + MGP_BALBcJ_P0046340 Syngap1 protein_coding protein_coding MGP_BALBcJ_T0046341.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25613533 25645540 + MGP_BALBcJ_P0046341 Syngap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046342.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25624682 25645352 + MGP_BALBcJ_P0046342 Syngap1 protein_coding protein_coding MGP_BALBcJ_T0046343.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25632056 25646854 + MGP_BALBcJ_P0046343 Syngap1 protein_coding protein_coding MGP_BALBcJ_T0046344.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25632512 25634798 + MGP_BALBcJ_P0046344 Syngap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046345.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25634524 25635242 + Syngap1 protein_coding retained_intron MGP_BALBcJ_T0046346.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25636992 25644981 + MGP_BALBcJ_P0046346 Syngap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046347.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25637503 25645010 + MGP_BALBcJ_P0046347 Syngap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046348.1 MGP_BALBcJ_G0023374.1 mouse_genomes_project 17 25637517 25645006 + MGP_BALBcJ_P0046348 Syngap1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0102296.1 MGP_BALBcJ_G0040112.1 mouse_genomes_project 17 19386048 19386561 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045640.1 MGP_BALBcJ_G0023159.1 mouse_genomes_project 17 16078495 16107416 + MGP_BALBcJ_P0045640 protein_coding protein_coding MGP_BALBcJ_T0048342.1 MGP_BALBcJ_G0023938.1 mouse_genomes_project 17 65699365 65839091 - MGP_BALBcJ_P0048342 Rab31 protein_coding protein_coding MGP_BALBcJ_T0102294.1 MGP_BALBcJ_G0040110.1 mouse_genomes_project 17 19062458 19062882 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047947.1 MGP_BALBcJ_G0023799.1 mouse_genomes_project 17 46731728 46733571 + MGP_BALBcJ_P0047947 Tbcc protein_coding protein_coding MGP_BALBcJ_T0046122.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174383 24258967 + MGP_BALBcJ_P0046122 Lmf1 protein_coding protein_coding MGP_BALBcJ_T0046123.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174386 24258967 + MGP_BALBcJ_P0046123 Lmf1 protein_coding protein_coding MGP_BALBcJ_T0046124.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174396 24193765 + Lmf1 protein_coding retained_intron MGP_BALBcJ_T0046125.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174396 24258863 + MGP_BALBcJ_P0046125 Lmf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046126.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174406 24250237 + MGP_BALBcJ_P0046126 Lmf1 protein_coding protein_coding MGP_BALBcJ_T0046127.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174408 24184443 + Lmf1 protein_coding retained_intron MGP_BALBcJ_T0046128.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174408 24230855 + Lmf1 protein_coding retained_intron MGP_BALBcJ_T0046129.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174408 24243396 + Lmf1 protein_coding retained_intron MGP_BALBcJ_T0046130.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24174529 24226694 + Lmf1 protein_coding processed_transcript MGP_BALBcJ_T0046131.1 MGP_BALBcJ_G0023323.1 mouse_genomes_project 17 24250797 24251831 + MGP_BALBcJ_P0046131 Lmf1 protein_coding protein_coding MGP_BALBcJ_T0003754.1 MGP_BALBcJ_G0003377.1 mouse_genomes_project 17 45380921 45383738 + Gm17080 antisense antisense MGP_BALBcJ_T0047898.1 MGP_BALBcJ_G0023778.1 mouse_genomes_project 17 46259312 46259834 - MGP_BALBcJ_P0047898 Gm5093 protein_coding protein_coding MGP_BALBcJ_T0011417.1 MGP_BALBcJ_G0009542.1 mouse_genomes_project 17 85866227 85866301 + Gm27610 misc_RNA misc_RNA MGP_BALBcJ_T0048405.1 MGP_BALBcJ_G0023956.1 mouse_genomes_project 17 69486192 69493619 + MGP_BALBcJ_P0048405 Zbtb14 protein_coding protein_coding MGP_BALBcJ_T0047076.1 MGP_BALBcJ_G0023544.1 mouse_genomes_project 17 33638284 33643162 + MGP_BALBcJ_P0047076 Pbx2 protein_coding protein_coding MGP_BALBcJ_T0047077.1 MGP_BALBcJ_G0023544.1 mouse_genomes_project 17 33638464 33642174 + MGP_BALBcJ_P0047077 Pbx2 protein_coding protein_coding MGP_BALBcJ_T0047078.1 MGP_BALBcJ_G0023544.1 mouse_genomes_project 17 33639124 33640121 + MGP_BALBcJ_P0047078 Pbx2 protein_coding protein_coding MGP_BALBcJ_T0047079.1 MGP_BALBcJ_G0023544.1 mouse_genomes_project 17 33641217 33641985 + Pbx2 protein_coding retained_intron MGP_BALBcJ_T0047899.1 MGP_BALBcJ_G0023779.1 mouse_genomes_project 17 46262183 46310541 - MGP_BALBcJ_P0047899 Ttbk1 protein_coding protein_coding MGP_BALBcJ_T0047900.1 MGP_BALBcJ_G0023779.1 mouse_genomes_project 17 46280457 46307134 - MGP_BALBcJ_P0047900 Ttbk1 protein_coding unknown_likely_coding MGP_BALBcJ_T0017508.1 MGP_BALBcJ_G0015276.1 mouse_genomes_project 17 12600356 12614614 + Gm28869 processed_transcript processed_transcript MGP_BALBcJ_T0011408.1 MGP_BALBcJ_G0009533.1 mouse_genomes_project 17 46838210 46838504 - Gm23657 misc_RNA misc_RNA MGP_BALBcJ_T0013212.1 MGP_BALBcJ_G0011309.1 mouse_genomes_project 17 35140370 35141175 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047518.1 MGP_BALBcJ_G0023631.1 mouse_genomes_project 17 35304328 35305360 - MGP_BALBcJ_P0047518 Gm7030 protein_coding protein_coding MGP_BALBcJ_T0006895.1 MGP_BALBcJ_G0005674.1 mouse_genomes_project 17 25508413 25547437 + Gm20468 lincRNA lincRNA MGP_BALBcJ_T0047930.1 MGP_BALBcJ_G0023790.1 mouse_genomes_project 17 46516750 46538828 - MGP_BALBcJ_P0047930 Ppp2r5d protein_coding protein_coding MGP_BALBcJ_T0046430.1 MGP_BALBcJ_G0023396.1 mouse_genomes_project 17 26885382 26917922 + MGP_BALBcJ_P0046430 Scube3 protein_coding protein_coding MGP_BALBcJ_T0046431.1 MGP_BALBcJ_G0023396.1 mouse_genomes_project 17 26895534 26914584 + Scube3 protein_coding processed_transcript MGP_BALBcJ_T0046432.1 MGP_BALBcJ_G0023396.1 mouse_genomes_project 17 26896691 26913215 + MGP_BALBcJ_P0046432 Scube3 protein_coding protein_coding MGP_BALBcJ_T0046433.1 MGP_BALBcJ_G0023396.1 mouse_genomes_project 17 26903830 26916097 + Scube3 protein_coding processed_transcript MGP_BALBcJ_T0046434.1 MGP_BALBcJ_G0023396.1 mouse_genomes_project 17 26908878 26910718 + Scube3 protein_coding retained_intron MGP_BALBcJ_T0100842.1 MGP_BALBcJ_G0038878.1 mouse_genomes_project 17 62480166 62480300 - Gm25800 snoRNA snoRNA MGP_BALBcJ_T0047681.1 MGP_BALBcJ_G0023712.1 mouse_genomes_project 17 39673069 39675063 + MGP_BALBcJ_P0047681 Esp38 protein_coding protein_coding MGP_BALBcJ_T0006893.1 MGP_BALBcJ_G0005672.1 mouse_genomes_project 17 24593190 24595848 + 1700022N22Rik lincRNA lincRNA MGP_BALBcJ_T0102318.1 MGP_BALBcJ_G0040134.1 mouse_genomes_project 17 33557331 33557486 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046304.1 MGP_BALBcJ_G0023364.1 mouse_genomes_project 17 25040667 25067598 + MGP_BALBcJ_P0046304 Neurl1b protein_coding protein_coding MGP_BALBcJ_T0046305.1 MGP_BALBcJ_G0023364.1 mouse_genomes_project 17 25040667 25067598 + MGP_BALBcJ_P0046305 Neurl1b protein_coding protein_coding MGP_BALBcJ_T0046306.1 MGP_BALBcJ_G0023364.1 mouse_genomes_project 17 25040748 25072090 + MGP_BALBcJ_P0046306 Neurl1b protein_coding protein_coding MGP_BALBcJ_T0048303.1 MGP_BALBcJ_G0023921.1 mouse_genomes_project 17 57248417 57298916 + MGP_BALBcJ_P0048303 Vav1 protein_coding protein_coding MGP_BALBcJ_T0048304.1 MGP_BALBcJ_G0023921.1 mouse_genomes_project 17 57248417 57298997 + MGP_BALBcJ_P0048304 Vav1 protein_coding protein_coding MGP_BALBcJ_T0048305.1 MGP_BALBcJ_G0023921.1 mouse_genomes_project 17 57248444 57298921 + MGP_BALBcJ_P0048305 Vav1 protein_coding protein_coding MGP_BALBcJ_T0048306.1 MGP_BALBcJ_G0023921.1 mouse_genomes_project 17 57274528 57276790 + Vav1 protein_coding retained_intron MGP_BALBcJ_T0048307.1 MGP_BALBcJ_G0023921.1 mouse_genomes_project 17 57283246 57298919 + Vav1 protein_coding processed_transcript MGP_BALBcJ_T0047339.1 MGP_BALBcJ_G0023598.1 mouse_genomes_project 17 34349338 34354417 + Atp6v1g2 protein_coding retained_intron MGP_BALBcJ_T0047340.1 MGP_BALBcJ_G0023598.1 mouse_genomes_project 17 34350746 34353455 + MGP_BALBcJ_P0047340 Atp6v1g2 protein_coding protein_coding MGP_BALBcJ_T0047341.1 MGP_BALBcJ_G0023598.1 mouse_genomes_project 17 34351534 34353554 + MGP_BALBcJ_P0047341 Atp6v1g2 protein_coding protein_coding MGP_BALBcJ_T0047342.1 MGP_BALBcJ_G0023598.1 mouse_genomes_project 17 34351548 34353723 + Atp6v1g2 protein_coding retained_intron MGP_BALBcJ_T0047343.1 MGP_BALBcJ_G0023598.1 mouse_genomes_project 17 34352215 34354417 + MGP_BALBcJ_P0047343 Atp6v1g2 protein_coding protein_coding MGP_BALBcJ_T0047344.1 MGP_BALBcJ_G0023598.1 mouse_genomes_project 17 34352309 34353617 + Atp6v1g2 protein_coding retained_intron MGP_BALBcJ_T0047124.1 MGP_BALBcJ_G0023552.1 mouse_genomes_project 17 33694288 33702216 + MGP_BALBcJ_P0047124 Atf6b protein_coding protein_coding MGP_BALBcJ_T0047125.1 MGP_BALBcJ_G0023552.1 mouse_genomes_project 17 33694328 33696274 + MGP_BALBcJ_P0047125 Atf6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047126.1 MGP_BALBcJ_G0023552.1 mouse_genomes_project 17 33694328 33696329 + MGP_BALBcJ_P0047126 Atf6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047127.1 MGP_BALBcJ_G0023552.1 mouse_genomes_project 17 33694338 33702021 + MGP_BALBcJ_P0047127 Atf6b protein_coding protein_coding MGP_BALBcJ_T0047128.1 MGP_BALBcJ_G0023552.1 mouse_genomes_project 17 33698763 33699244 + Atf6b protein_coding retained_intron MGP_BALBcJ_T0045529.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 10830601 10917670 - Tcte2 protein_coding processed_transcript MGP_BALBcJ_T0045530.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 10832623 11110202 - Tcte2 protein_coding processed_transcript MGP_BALBcJ_T0045531.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 10832623 11018082 - Tcte2 protein_coding processed_transcript MGP_BALBcJ_T0045532.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11061209 11110202 - MGP_BALBcJ_P0045532 Tcte2 protein_coding protein_coding MGP_BALBcJ_T0045533.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11061215 11110226 - MGP_BALBcJ_P0045533 Tcte2 protein_coding protein_coding MGP_BALBcJ_T0045534.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11062796 11110191 - MGP_BALBcJ_P0045534 Tcte2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0045535.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11062814 11081697 - MGP_BALBcJ_P0045535 Tcte2 protein_coding protein_coding MGP_BALBcJ_T0045536.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11065201 11110425 - MGP_BALBcJ_P0045536 Tcte2 protein_coding protein_coding MGP_BALBcJ_T0045537.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11065201 11110649 - MGP_BALBcJ_P0045537 Tcte2 protein_coding protein_coding MGP_BALBcJ_T0045538.1 MGP_BALBcJ_G0023128.1 mouse_genomes_project 17 11065201 11110210 - MGP_BALBcJ_P0045538 Tcte2 protein_coding protein_coding MGP_BALBcJ_T0102316.1 MGP_BALBcJ_G0040132.1 mouse_genomes_project 17 33480324 33480683 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010165.1 MGP_BALBcJ_G0008290.1 mouse_genomes_project 17 25596435 25596493 + Gm27740 miRNA miRNA MGP_BALBcJ_T0011406.1 MGP_BALBcJ_G0009531.1 mouse_genomes_project 17 43737911 43738197 - Gm24532 misc_RNA misc_RNA MGP_BALBcJ_T0006961.1 MGP_BALBcJ_G0005723.1 mouse_genomes_project 17 83276855 83278583 + Gm29052 lincRNA lincRNA MGP_BALBcJ_T0047914.1 MGP_BALBcJ_G0023784.1 mouse_genomes_project 17 46462894 46478530 - MGP_BALBcJ_P0047914 Klc4 protein_coding unknown_likely_coding MGP_BALBcJ_T0048423.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70947661 70954663 - MGP_BALBcJ_P0048423 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048424.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70947661 70953247 - MGP_BALBcJ_P0048424 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048425.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70947667 70956991 - MGP_BALBcJ_P0048425 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048426.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70947667 70954525 - MGP_BALBcJ_P0048426 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048427.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70947667 70955190 - MGP_BALBcJ_P0048427 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048428.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70948184 70953247 - MGP_BALBcJ_P0048428 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048429.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70948325 70949783 - MGP_BALBcJ_P0048429 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048430.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70948437 70950627 - MGP_BALBcJ_P0048430 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048431.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70949637 70953101 - MGP_BALBcJ_P0048431 Tgif1 protein_coding protein_coding MGP_BALBcJ_T0048432.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70949751 70954587 - Tgif1 protein_coding processed_transcript MGP_BALBcJ_T0048433.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70950126 70953271 - Tgif1 protein_coding retained_intron MGP_BALBcJ_T0048434.1 MGP_BALBcJ_G0023959.1 mouse_genomes_project 17 70951830 70953264 - Tgif1 protein_coding processed_transcript MGP_BALBcJ_T0048294.1 MGP_BALBcJ_G0023915.1 mouse_genomes_project 17 57071322 57073701 + MGP_BALBcJ_P0048294 Tnfsf9 protein_coding protein_coding MGP_BALBcJ_T0102288.1 MGP_BALBcJ_G0040104.1 mouse_genomes_project 17 18132189 18201800 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048775.1 MGP_BALBcJ_G0024079.1 mouse_genomes_project 17 95085750 95122663 - MGP_BALBcJ_P0048775 Mettl4 protein_coding protein_coding MGP_BALBcJ_T0046240.1 MGP_BALBcJ_G0023348.1 mouse_genomes_project 17 24552030 24558180 - MGP_BALBcJ_P0046240 A930017K11Rik protein_coding protein_coding MGP_BALBcJ_T0045395.1 MGP_BALBcJ_G0023083.1 mouse_genomes_project 17 3135850 3143250 + MGP_BALBcJ_P0045395 Gtf2h5 protein_coding protein_coding MGP_BALBcJ_T0045396.1 MGP_BALBcJ_G0023083.1 mouse_genomes_project 17 3135901 3138403 + Gtf2h5 protein_coding retained_intron MGP_BALBcJ_T0045397.1 MGP_BALBcJ_G0023083.1 mouse_genomes_project 17 3135994 3141863 + MGP_BALBcJ_P0045397 Gtf2h5 protein_coding protein_coding MGP_BALBcJ_T0047529.1 MGP_BALBcJ_G0023636.1 mouse_genomes_project 17 35598865 35601076 - MGP_BALBcJ_P0047529 Rpp21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047530.1 MGP_BALBcJ_G0023636.1 mouse_genomes_project 17 35598887 35601063 - Rpp21 protein_coding retained_intron MGP_BALBcJ_T0047531.1 MGP_BALBcJ_G0023636.1 mouse_genomes_project 17 35598887 35601288 - MGP_BALBcJ_P0047531 Rpp21 protein_coding protein_coding MGP_BALBcJ_T0047532.1 MGP_BALBcJ_G0023636.1 mouse_genomes_project 17 35598893 35599571 - Rpp21 protein_coding retained_intron MGP_BALBcJ_T0047533.1 MGP_BALBcJ_G0023636.1 mouse_genomes_project 17 35598932 35600830 - MGP_BALBcJ_P0047533 Rpp21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047534.1 MGP_BALBcJ_G0023636.1 mouse_genomes_project 17 35599164 35601075 - Rpp21 protein_coding retained_intron MGP_BALBcJ_T0006892.1 MGP_BALBcJ_G0005671.1 mouse_genomes_project 17 24394154 24570487 + lincRNA lincRNA MGP_BALBcJ_T0010158.1 MGP_BALBcJ_G0008283.1 mouse_genomes_project 17 22772408 22772471 - Mir6965 miRNA miRNA MGP_BALBcJ_T0013247.1 MGP_BALBcJ_G0011344.1 mouse_genomes_project 17 53253278 53255203 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047643.1 MGP_BALBcJ_G0023681.1 mouse_genomes_project 17 37025772 37026763 - Olfr112 protein_coding processed_transcript MGP_BALBcJ_T0047644.1 MGP_BALBcJ_G0023681.1 mouse_genomes_project 17 37025783 37029639 - MGP_BALBcJ_P0047644 Olfr112 protein_coding protein_coding MGP_BALBcJ_T0047645.1 MGP_BALBcJ_G0023681.1 mouse_genomes_project 17 37025954 37029251 - MGP_BALBcJ_P0047645 Olfr112 protein_coding protein_coding MGP_BALBcJ_T0045932.1 MGP_BALBcJ_G0023275.1 mouse_genomes_project 17 23183925 23194818 - MGP_BALBcJ_P0045932 Slc9a3r2 protein_coding protein_coding MGP_BALBcJ_T0045933.1 MGP_BALBcJ_G0023275.1 mouse_genomes_project 17 23183925 23189501 - MGP_BALBcJ_P0045933 Slc9a3r2 protein_coding protein_coding MGP_BALBcJ_T0046071.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23811801 23813178 - Baiap3 protein_coding retained_intron MGP_BALBcJ_T0046072.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23811801 23825475 - MGP_BALBcJ_P0046072 Baiap3 protein_coding protein_coding MGP_BALBcJ_T0046073.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23812499 23823066 - MGP_BALBcJ_P0046073 Baiap3 protein_coding protein_coding MGP_BALBcJ_T0046074.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23812514 23813456 - MGP_BALBcJ_P0046074 Baiap3 protein_coding protein_coding MGP_BALBcJ_T0046075.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23812523 23825392 - MGP_BALBcJ_P0046075 Baiap3 protein_coding protein_coding MGP_BALBcJ_T0046076.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23812666 23825392 - MGP_BALBcJ_P0046076 Baiap3 protein_coding protein_coding MGP_BALBcJ_T0046077.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23813935 23814927 - Baiap3 protein_coding retained_intron MGP_BALBcJ_T0046078.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23815156 23817254 - Baiap3 protein_coding retained_intron MGP_BALBcJ_T0046079.1 MGP_BALBcJ_G0023311.1 mouse_genomes_project 17 23820139 23825385 - Baiap3 protein_coding retained_intron MGP_BALBcJ_T0046764.1 MGP_BALBcJ_G0023469.1 mouse_genomes_project 17 31374052 31395260 + MGP_BALBcJ_P0046764 Cyp4f17 protein_coding protein_coding MGP_BALBcJ_T0102358.1 MGP_BALBcJ_G0040174.1 mouse_genomes_project 17 36877951 36878672 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0047345.1 MGP_BALBcJ_G0023599.1 mouse_genomes_project 17 34357387 34372381 + MGP_BALBcJ_P0047345 Ddx39b protein_coding protein_coding MGP_BALBcJ_T0047346.1 MGP_BALBcJ_G0023599.1 mouse_genomes_project 17 34357446 34368813 + Ddx39b protein_coding retained_intron MGP_BALBcJ_T0047347.1 MGP_BALBcJ_G0023599.1 mouse_genomes_project 17 34357511 34372354 + MGP_BALBcJ_P0047347 Ddx39b protein_coding protein_coding MGP_BALBcJ_T0047348.1 MGP_BALBcJ_G0023599.1 mouse_genomes_project 17 34357637 34358867 + Ddx39b protein_coding processed_transcript MGP_BALBcJ_T0047349.1 MGP_BALBcJ_G0023599.1 mouse_genomes_project 17 34358310 34372350 + MGP_BALBcJ_P0047349 Ddx39b protein_coding protein_coding MGP_BALBcJ_T0047402.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34899328 34918320 - MGP_BALBcJ_P0047402 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047403.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34899328 34922237 - MGP_BALBcJ_P0047403 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047404.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34899331 34921679 - MGP_BALBcJ_P0047404 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047405.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34899331 34921777 - MGP_BALBcJ_P0047405 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047406.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34899331 34919752 - MGP_BALBcJ_P0047406 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047407.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34900192 34918262 - MGP_BALBcJ_P0047407 Ddr1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047408.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34903062 34919672 - MGP_BALBcJ_P0047408 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047409.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34907805 34921615 - MGP_BALBcJ_P0047409 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047410.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34907833 34922259 - MGP_BALBcJ_P0047410 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047411.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34907933 34915705 - MGP_BALBcJ_P0047411 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047412.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34908909 34919754 - MGP_BALBcJ_P0047412 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0047413.1 MGP_BALBcJ_G0023611.1 mouse_genomes_project 17 34910778 34920025 - MGP_BALBcJ_P0047413 Ddr1 protein_coding protein_coding MGP_BALBcJ_T0099576.1 MGP_BALBcJ_G0037612.1 mouse_genomes_project 17 55567684 55567789 + Gm22654 snRNA snRNA MGP_BALBcJ_T0047009.1 MGP_BALBcJ_G0023526.1 mouse_genomes_project 17 33139838 33159395 + MGP_BALBcJ_P0047009 protein_coding protein_coding MGP_BALBcJ_T0048334.1 MGP_BALBcJ_G0023933.1 mouse_genomes_project 17 64643818 64799858 + MGP_BALBcJ_P0048334 Man2a1 protein_coding protein_coding MGP_BALBcJ_T0048335.1 MGP_BALBcJ_G0023933.1 mouse_genomes_project 17 64757958 64759341 + Man2a1 protein_coding retained_intron MGP_BALBcJ_T0048336.1 MGP_BALBcJ_G0023933.1 mouse_genomes_project 17 64758157 64799586 + MGP_BALBcJ_P0048336 Man2a1 protein_coding protein_coding MGP_BALBcJ_T0010187.1 MGP_BALBcJ_G0008312.1 mouse_genomes_project 17 34359717 34359778 + Mir6975 miRNA miRNA MGP_BALBcJ_T0003717.1 MGP_BALBcJ_G0003350.1 mouse_genomes_project 17 27699285 27700792 + 1700030A11Rik antisense antisense MGP_BALBcJ_T0046809.1 MGP_BALBcJ_G0023486.1 mouse_genomes_project 17 32118191 32124366 - MGP_BALBcJ_P0046809 Gm4461 protein_coding protein_coding MGP_BALBcJ_T0048392.1 MGP_BALBcJ_G0023951.1 mouse_genomes_project 17 67816245 67943957 + MGP_BALBcJ_P0048392 Lama1 protein_coding protein_coding MGP_BALBcJ_T0006928.1 MGP_BALBcJ_G0005702.1 mouse_genomes_project 17 37302482 37306208 + Gm20524 lincRNA lincRNA MGP_BALBcJ_T0047376.1 MGP_BALBcJ_G0023608.1 mouse_genomes_project 17 34845708 34853534 - MGP_BALBcJ_P0047376 Dpcr1 protein_coding protein_coding MGP_BALBcJ_T0047237.1 MGP_BALBcJ_G0023572.1 mouse_genomes_project 17 34120870 34131022 + MGP_BALBcJ_P0047237 Vwa7 protein_coding protein_coding MGP_BALBcJ_T0047238.1 MGP_BALBcJ_G0023572.1 mouse_genomes_project 17 34120929 34130796 + MGP_BALBcJ_P0047238 Vwa7 protein_coding protein_coding MGP_BALBcJ_T0047211.1 MGP_BALBcJ_G0023568.1 mouse_genomes_project 17 34050972 34053089 - MGP_BALBcJ_P0047211 Hspa1b protein_coding protein_coding MGP_BALBcJ_T0046349.1 MGP_BALBcJ_G0023375.1 mouse_genomes_project 17 25647586 25650625 + MGP_BALBcJ_P0046349 Zbtb9 protein_coding protein_coding MGP_BALBcJ_T0048407.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70067598 70924208 + MGP_BALBcJ_P0048407 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048408.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70067771 70922519 + MGP_BALBcJ_P0048408 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048409.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70069509 70609706 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048410.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70069509 70187268 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048411.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70069514 70752892 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048412.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70069543 70918591 + MGP_BALBcJ_P0048412 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048413.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70069562 70686444 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048414.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70515717 70922597 + MGP_BALBcJ_P0048414 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048415.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70606925 70921029 + MGP_BALBcJ_P0048415 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048416.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70612932 70687817 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048417.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70612991 70889477 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048418.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70612991 70924204 + MGP_BALBcJ_P0048418 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048419.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70613000 70921340 + MGP_BALBcJ_P0048419 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048420.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70613017 70921097 + MGP_BALBcJ_P0048420 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048421.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70651997 70813013 + Dlgap1 protein_coding retained_intron MGP_BALBcJ_T0048422.1 MGP_BALBcJ_G0023958.1 mouse_genomes_project 17 70652232 70918888 + MGP_BALBcJ_P0048422 Dlgap1 protein_coding protein_coding MGP_BALBcJ_T0048604.1 MGP_BALBcJ_G0024020.1 mouse_genomes_project 17 80522035 80536157 + MGP_BALBcJ_P0048604 Morn2 protein_coding protein_coding MGP_BALBcJ_T0048725.1 MGP_BALBcJ_G0024070.1 mouse_genomes_project 17 88795554 88842554 + MGP_BALBcJ_P0048725 Foxn2 protein_coding protein_coding MGP_BALBcJ_T0048726.1 MGP_BALBcJ_G0024070.1 mouse_genomes_project 17 88795585 88815188 + MGP_BALBcJ_P0048726 Foxn2 protein_coding protein_coding MGP_BALBcJ_T0048727.1 MGP_BALBcJ_G0024070.1 mouse_genomes_project 17 88795608 88830108 + Foxn2 protein_coding retained_intron MGP_BALBcJ_T0048728.1 MGP_BALBcJ_G0024070.1 mouse_genomes_project 17 88795625 88839277 + MGP_BALBcJ_P0048728 Foxn2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047546.1 MGP_BALBcJ_G0023641.1 mouse_genomes_project 17 35842640 35846596 - MGP_BALBcJ_P0047546 H2-M10.4 protein_coding protein_coding MGP_BALBcJ_T0047547.1 MGP_BALBcJ_G0023641.1 mouse_genomes_project 17 35842644 35846521 - MGP_BALBcJ_P0047547 H2-M10.4 protein_coding protein_coding MGP_BALBcJ_T0047628.1 MGP_BALBcJ_G0023668.1 mouse_genomes_project 17 36669951 36671002 + MGP_BALBcJ_P0047628 Olfr96 protein_coding protein_coding MGP_BALBcJ_T0048619.1 MGP_BALBcJ_G0024030.1 mouse_genomes_project 17 81677565 81677726 + MGP_BALBcJ_P0048619 Gm11096 protein_coding protein_coding MGP_BALBcJ_T0047765.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45359321 45364831 - MGP_BALBcJ_P0047765 Hsp90ab1 protein_coding protein_coding MGP_BALBcJ_T0047766.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45360404 45361286 - Hsp90ab1 protein_coding retained_intron MGP_BALBcJ_T0047767.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45360564 45364813 - MGP_BALBcJ_P0047767 Hsp90ab1 protein_coding protein_coding MGP_BALBcJ_T0047768.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45361127 45364815 - MGP_BALBcJ_P0047768 Hsp90ab1 protein_coding protein_coding MGP_BALBcJ_T0047769.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45361994 45363129 - Hsp90ab1 protein_coding retained_intron MGP_BALBcJ_T0047770.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45362210 45364815 - MGP_BALBcJ_P0047770 Hsp90ab1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0047771.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45362565 45364831 - Hsp90ab1 protein_coding retained_intron MGP_BALBcJ_T0047772.1 MGP_BALBcJ_G0023755.1 mouse_genomes_project 17 45363084 45364105 - MGP_BALBcJ_P0047772 Hsp90ab1 protein_coding protein_coding MGP_BALBcJ_T0045390.1 MGP_BALBcJ_G0023082.1 mouse_genomes_project 17 3098368 3135806 - MGP_BALBcJ_P0045390 Serac1 protein_coding protein_coding MGP_BALBcJ_T0045391.1 MGP_BALBcJ_G0023082.1 mouse_genomes_project 17 3100076 3106213 - Serac1 protein_coding processed_transcript MGP_BALBcJ_T0045392.1 MGP_BALBcJ_G0023082.1 mouse_genomes_project 17 3100238 3135792 - MGP_BALBcJ_P0045392 Serac1 protein_coding protein_coding MGP_BALBcJ_T0045393.1 MGP_BALBcJ_G0023082.1 mouse_genomes_project 17 3106184 3107546 - Serac1 protein_coding retained_intron MGP_BALBcJ_T0045394.1 MGP_BALBcJ_G0023082.1 mouse_genomes_project 17 3121086 3135798 - Serac1 protein_coding processed_transcript MGP_BALBcJ_T0045888.1 MGP_BALBcJ_G0023265.1 mouse_genomes_project 17 22985350 22997347 - MGP_BALBcJ_P0045888 E4f1 protein_coding unknown_likely_coding MGP_BALBcJ_T0045889.1 MGP_BALBcJ_G0023265.1 mouse_genomes_project 17 22985370 22997382 - MGP_BALBcJ_P0045889 E4f1 protein_coding protein_coding MGP_BALBcJ_T0046614.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28466903 28512598 + MGP_BALBcJ_P0046614 Cmtr1 protein_coding protein_coding MGP_BALBcJ_T0046615.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28467115 28480691 + MGP_BALBcJ_P0046615 Cmtr1 protein_coding protein_coding MGP_BALBcJ_T0046616.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28485298 28497042 + Cmtr1 protein_coding retained_intron MGP_BALBcJ_T0046617.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28485680 28488585 + MGP_BALBcJ_P0046617 Cmtr1 protein_coding protein_coding MGP_BALBcJ_T0046618.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28486865 28496626 + Cmtr1 protein_coding processed_transcript MGP_BALBcJ_T0046619.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28487595 28492348 + Cmtr1 protein_coding processed_transcript MGP_BALBcJ_T0046620.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28488568 28496730 + Cmtr1 protein_coding retained_intron MGP_BALBcJ_T0046621.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28492214 28496712 + Cmtr1 protein_coding retained_intron MGP_BALBcJ_T0046622.1 MGP_BALBcJ_G0023434.1 mouse_genomes_project 17 28493473 28509978 + Cmtr1 protein_coding retained_intron MGP_BALBcJ_T0048366.1 MGP_BALBcJ_G0023943.1 mouse_genomes_project 17 66156662 66179770 - MGP_BALBcJ_P0048366 Ndufv2 protein_coding protein_coding MGP_BALBcJ_T0048367.1 MGP_BALBcJ_G0023943.1 mouse_genomes_project 17 66156889 66179666 - MGP_BALBcJ_P0048367 Ndufv2 protein_coding protein_coding MGP_BALBcJ_T0048368.1 MGP_BALBcJ_G0023943.1 mouse_genomes_project 17 66165544 66179680 - MGP_BALBcJ_P0048368 Ndufv2 protein_coding protein_coding MGP_BALBcJ_T0045674.1 MGP_BALBcJ_G0023186.1 mouse_genomes_project 17 19077848 19078808 - MGP_BALBcJ_P0045674 Vmn1r233 protein_coding protein_coding MGP_BALBcJ_T0048084.1 MGP_BALBcJ_G0023835.1 mouse_genomes_project 17 48322095 48335699 - MGP_BALBcJ_P0048084 Apobec2 protein_coding protein_coding MGP_BALBcJ_T0100827.1 MGP_BALBcJ_G0038863.1 mouse_genomes_project 17 22551791 22551920 - Gm25092 snoRNA snoRNA MGP_BALBcJ_T0047773.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380001 45394495 - MGP_BALBcJ_P0047773 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047774.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380001 45387936 - MGP_BALBcJ_P0047774 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047775.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380003 45389002 - MGP_BALBcJ_P0047775 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047776.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380004 45390928 - MGP_BALBcJ_P0047776 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047777.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380004 45391262 - MGP_BALBcJ_P0047777 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047778.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380004 45390930 - MGP_BALBcJ_P0047778 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047779.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380343 45387858 - MGP_BALBcJ_P0047779 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047780.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45380472 45387623 - MGP_BALBcJ_P0047780 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047781.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45381019 45384102 - Slc29a1 protein_coding processed_transcript MGP_BALBcJ_T0047782.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45383726 45390860 - MGP_BALBcJ_P0047782 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047783.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45383727 45390960 - MGP_BALBcJ_P0047783 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047784.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45383880 45388201 - Slc29a1 protein_coding retained_intron MGP_BALBcJ_T0047785.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45384228 45385472 - Slc29a1 protein_coding retained_intron MGP_BALBcJ_T0047786.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45384567 45390909 - Slc29a1 protein_coding retained_intron MGP_BALBcJ_T0047787.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45384777 45390873 - Slc29a1 protein_coding retained_intron MGP_BALBcJ_T0047788.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45384777 45394496 - MGP_BALBcJ_P0047788 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047789.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45384877 45391211 - MGP_BALBcJ_P0047789 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047790.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45384883 45388996 - MGP_BALBcJ_P0047790 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047791.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385057 45394498 - MGP_BALBcJ_P0047791 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047792.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385082 45390914 - MGP_BALBcJ_P0047792 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047793.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385132 45390860 - MGP_BALBcJ_P0047793 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047794.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385317 45390899 - MGP_BALBcJ_P0047794 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047795.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385383 45390901 - MGP_BALBcJ_P0047795 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047796.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385429 45391316 - MGP_BALBcJ_P0047796 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0047797.1 MGP_BALBcJ_G0023756.1 mouse_genomes_project 17 45385472 45392423 - MGP_BALBcJ_P0047797 Slc29a1 protein_coding protein_coding MGP_BALBcJ_T0045648.1 MGP_BALBcJ_G0023166.1 mouse_genomes_project 17 17691348 17729204 + MGP_BALBcJ_P0045648 Vmn2r102 protein_coding protein_coding MGP_BALBcJ_T0099587.1 MGP_BALBcJ_G0037623.1 mouse_genomes_project 17 84628842 84628949 + Gm24722 snRNA snRNA MGP_BALBcJ_T0047757.1 MGP_BALBcJ_G0023748.1 mouse_genomes_project 17 45180018 45223254 - MGP_BALBcJ_P0047757 Cdc5l protein_coding unknown_likely_coding MGP_BALBcJ_T0047758.1 MGP_BALBcJ_G0023748.1 mouse_genomes_project 17 45180029 45223526 - MGP_BALBcJ_P0047758 Cdc5l protein_coding protein_coding MGP_BALBcJ_T0047655.1 MGP_BALBcJ_G0023691.1 mouse_genomes_project 17 37261395 37265571 + MGP_BALBcJ_P0047655 protein_coding protein_coding MGP_BALBcJ_T0046645.1 MGP_BALBcJ_G0023442.1 mouse_genomes_project 17 29788965 29846270 + MGP_BALBcJ_P0046645 Umodl1 protein_coding protein_coding MGP_BALBcJ_T0046646.1 MGP_BALBcJ_G0023442.1 mouse_genomes_project 17 29788965 29846270 + MGP_BALBcJ_P0046646 Umodl1 protein_coding protein_coding MGP_BALBcJ_T0046647.1 MGP_BALBcJ_G0023442.1 mouse_genomes_project 17 29788969 29846270 + MGP_BALBcJ_P0046647 Umodl1 protein_coding protein_coding MGP_BALBcJ_T0046648.1 MGP_BALBcJ_G0023442.1 mouse_genomes_project 17 29789034 29845427 + MGP_BALBcJ_P0046648 Umodl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0047798.1 MGP_BALBcJ_G0023757.1 mouse_genomes_project 17 45395858 45396994 - MGP_BALBcJ_P0047798 Gm7325 protein_coding protein_coding MGP_BALBcJ_T0047799.1 MGP_BALBcJ_G0023757.1 mouse_genomes_project 17 45395858 45396959 - MGP_BALBcJ_P0047799 Gm7325 protein_coding protein_coding MGP_BALBcJ_T0047800.1 MGP_BALBcJ_G0023757.1 mouse_genomes_project 17 45395858 45396807 - MGP_BALBcJ_P0047800 Gm7325 protein_coding protein_coding MGP_BALBcJ_T0047285.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34228525 34233744 - MGP_BALBcJ_P0047285 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047286.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34228527 34233601 - MGP_BALBcJ_P0047286 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047287.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34228527 34232090 - MGP_BALBcJ_P0047287 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047288.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34228529 34233488 - MGP_BALBcJ_P0047288 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047289.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34228571 34230389 - MGP_BALBcJ_P0047289 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047290.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34230011 34231096 - Csnk2b protein_coding retained_intron MGP_BALBcJ_T0047291.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34230012 34234368 - MGP_BALBcJ_P0047291 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047292.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34230311 34233345 - MGP_BALBcJ_P0047292 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047293.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34232068 34234313 - MGP_BALBcJ_P0047293 Csnk2b protein_coding protein_coding MGP_BALBcJ_T0047294.1 MGP_BALBcJ_G0023585.1 mouse_genomes_project 17 34232832 34233751 - Csnk2b protein_coding retained_intron MGP_BALBcJ_T0048286.1 MGP_BALBcJ_G0023911.1 mouse_genomes_project 17 57023045 57030440 + MGP_BALBcJ_P0048286 Crb3 protein_coding protein_coding MGP_BALBcJ_T0048287.1 MGP_BALBcJ_G0023911.1 mouse_genomes_project 17 57026193 57030446 + MGP_BALBcJ_P0048287 Crb3 protein_coding protein_coding MGP_BALBcJ_T0048288.1 MGP_BALBcJ_G0023911.1 mouse_genomes_project 17 57026245 57030445 + MGP_BALBcJ_P0048288 Crb3 protein_coding protein_coding MGP_BALBcJ_T0048289.1 MGP_BALBcJ_G0023911.1 mouse_genomes_project 17 57026261 57029955 + MGP_BALBcJ_P0048289 Crb3 protein_coding protein_coding MGP_BALBcJ_T0048290.1 MGP_BALBcJ_G0023911.1 mouse_genomes_project 17 57026470 57029692 + MGP_BALBcJ_P0048290 Crb3 protein_coding protein_coding MGP_BALBcJ_T0045720.1 MGP_BALBcJ_G0023214.1 mouse_genomes_project 17 21211011 21230566 - MGP_BALBcJ_P0045720 Zfp945 protein_coding protein_coding MGP_BALBcJ_T0045721.1 MGP_BALBcJ_G0023214.1 mouse_genomes_project 17 21213337 21225146 - Zfp945 protein_coding retained_intron MGP_BALBcJ_T0045722.1 MGP_BALBcJ_G0023214.1 mouse_genomes_project 17 21213337 21230566 - MGP_BALBcJ_P0045722 Zfp945 protein_coding protein_coding MGP_BALBcJ_T0045723.1 MGP_BALBcJ_G0023214.1 mouse_genomes_project 17 21216760 21230535 - MGP_BALBcJ_P0045723 Zfp945 protein_coding protein_coding MGP_BALBcJ_T0045724.1 MGP_BALBcJ_G0023214.1 mouse_genomes_project 17 21225153 21230566 - Zfp945 protein_coding retained_intron MGP_BALBcJ_T0011794.1 MGP_BALBcJ_G0009908.1 mouse_genomes_project 17 35439664 35441299 - polymorphic_pseudogene retained_intron MGP_BALBcJ_T0099573.1 MGP_BALBcJ_G0037609.1 mouse_genomes_project 17 47712108 47712278 - Gm25201 snRNA snRNA MGP_BALBcJ_T0046601.1 MGP_BALBcJ_G0023430.1 mouse_genomes_project 17 28331417 28354991 - MGP_BALBcJ_P0046601 Tmem217 protein_coding protein_coding MGP_BALBcJ_T0046602.1 MGP_BALBcJ_G0023430.1 mouse_genomes_project 17 28331417 28354991 - MGP_BALBcJ_P0046602 Tmem217 protein_coding protein_coding MGP_BALBcJ_T0048355.1 MGP_BALBcJ_G0023940.1 mouse_genomes_project 17 65919360 65956888 - MGP_BALBcJ_P0048355 Ralbp1 protein_coding protein_coding MGP_BALBcJ_T0048356.1 MGP_BALBcJ_G0023940.1 mouse_genomes_project 17 65919360 65956056 - MGP_BALBcJ_P0048356 Ralbp1 protein_coding protein_coding MGP_BALBcJ_T0045415.1 MGP_BALBcJ_G0023095.1 mouse_genomes_project 17 4682284 4702537 - MGP_BALBcJ_P0045415 Unc93a protein_coding protein_coding MGP_BALBcJ_T0047627.1 MGP_BALBcJ_G0023667.1 mouse_genomes_project 17 36654006 36654980 - MGP_BALBcJ_P0047627 Olfr95 protein_coding protein_coding MGP_BALBcJ_T0006970.1 MGP_BALBcJ_G0005729.1 mouse_genomes_project 17 87810784 87822575 + Gm28676 lincRNA lincRNA MGP_BALBcJ_T0011410.1 MGP_BALBcJ_G0009535.1 mouse_genomes_project 17 61257015 61257311 + Gm23773 misc_RNA misc_RNA MGP_BALBcJ_T0045644.1 MGP_BALBcJ_G0023162.1 mouse_genomes_project 17 17074309 17090442 + MGP_BALBcJ_P0045644 protein_coding protein_coding MGP_BALBcJ_T0048479.1 MGP_BALBcJ_G0023970.1 mouse_genomes_project 17 71769701 71812423 + MGP_BALBcJ_P0048479 Wdr43 protein_coding protein_coding MGP_BALBcJ_T0010171.1 MGP_BALBcJ_G0008296.1 mouse_genomes_project 17 26057387 26057449 + Mir7217 miRNA miRNA MGP_BALBcJ_T0045468.1 MGP_BALBcJ_G0023109.1 mouse_genomes_project 17 7684051 8127623 - MGP_BALBcJ_P0045468 Pacrg protein_coding protein_coding MGP_BALBcJ_T0045469.1 MGP_BALBcJ_G0023109.1 mouse_genomes_project 17 7861820 7917453 - Pacrg protein_coding processed_transcript MGP_BALBcJ_T0048252.1 MGP_BALBcJ_G0023889.1 mouse_genomes_project 17 56536548 56538868 - MGP_BALBcJ_P0048252 2410015M20Rik protein_coding protein_coding MGP_BALBcJ_T0048538.1 MGP_BALBcJ_G0023991.1 mouse_genomes_project 17 74903620 75041847 + MGP_BALBcJ_P0048538 Ttc27 protein_coding protein_coding MGP_BALBcJ_T0013253.1 MGP_BALBcJ_G0011350.1 mouse_genomes_project 17 53677397 53678723 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013221.1 MGP_BALBcJ_G0011318.1 mouse_genomes_project 17 35592223 35592536 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0047509.1 MGP_BALBcJ_G0023626.1 mouse_genomes_project 17 35240159 35247947 - MGP_BALBcJ_P0047509 H2-T24 protein_coding protein_coding MGP_BALBcJ_T0047510.1 MGP_BALBcJ_G0023626.1 mouse_genomes_project 17 35240733 35247912 - MGP_BALBcJ_P0047510 H2-T24 protein_coding protein_coding MGP_BALBcJ_T0046435.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26920276 26949533 + Zfp523 protein_coding retained_intron MGP_BALBcJ_T0046436.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26920408 26949533 + MGP_BALBcJ_P0046436 Zfp523 protein_coding protein_coding MGP_BALBcJ_T0046437.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26920487 26949531 + MGP_BALBcJ_P0046437 Zfp523 protein_coding protein_coding MGP_BALBcJ_T0046438.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26933007 26940877 + Zfp523 protein_coding processed_transcript MGP_BALBcJ_T0046439.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26940861 26945561 + MGP_BALBcJ_P0046439 Zfp523 protein_coding protein_coding MGP_BALBcJ_T0046440.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26945373 26948809 + MGP_BALBcJ_P0046440 Zfp523 protein_coding protein_coding MGP_BALBcJ_T0046441.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26945548 26949533 + MGP_BALBcJ_P0046441 Zfp523 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046442.1 MGP_BALBcJ_G0023397.1 mouse_genomes_project 17 26947755 26948954 + Zfp523 protein_coding retained_intron MGP_BALBcJ_T0045465.1 MGP_BALBcJ_G0023107.1 mouse_genomes_project 17 6960983 6964191 - MGP_BALBcJ_P0045465 Pabpc6 protein_coding protein_coding MGP_BALBcJ_T0045839.1 MGP_BALBcJ_G0023255.1 mouse_genomes_project 17 22693464 22716584 - MGP_BALBcJ_P0045839 Gm43796 protein_coding protein_coding MGP_BALBcJ_T0010181.1 MGP_BALBcJ_G0008306.1 mouse_genomes_project 17 33820837 33820904 - Gm27471 miRNA miRNA MGP_BALBcJ_T0048629.1 MGP_BALBcJ_G0024034.1 mouse_genomes_project 17 83810175 83861232 - MGP_BALBcJ_P0048629 Kcng3 protein_coding protein_coding MGP_BALBcJ_T0006898.1 MGP_BALBcJ_G0005677.1 mouse_genomes_project 17 26471608 26477868 + Gm15458 lincRNA lincRNA MGP_BALBcJ_T0047433.1 MGP_BALBcJ_G0023616.1 mouse_genomes_project 17 35085269 35089894 + MGP_BALBcJ_P0047433 Nrm protein_coding protein_coding MGP_BALBcJ_T0047434.1 MGP_BALBcJ_G0023616.1 mouse_genomes_project 17 35085289 35089155 + MGP_BALBcJ_P0047434 Nrm protein_coding protein_coding MGP_BALBcJ_T0047435.1 MGP_BALBcJ_G0023616.1 mouse_genomes_project 17 35085437 35089095 + MGP_BALBcJ_P0047435 Nrm protein_coding protein_coding MGP_BALBcJ_T0010176.1 MGP_BALBcJ_G0008301.1 mouse_genomes_project 17 29801779 29801877 + Gm24026 miRNA miRNA MGP_BALBcJ_T0046532.1 MGP_BALBcJ_G0023415.1 mouse_genomes_project 17 27689195 27709449 - MGP_BALBcJ_P0046532 4930539E08Rik protein_coding protein_coding MGP_BALBcJ_T0046533.1 MGP_BALBcJ_G0023415.1 mouse_genomes_project 17 27691686 27709358 - MGP_BALBcJ_P0046533 4930539E08Rik protein_coding unknown_likely_coding MGP_BALBcJ_T0046904.1 MGP_BALBcJ_G0023507.1 mouse_genomes_project 17 32871379 32872835 + MGP_BALBcJ_P0046904 Zbtb22 protein_coding protein_coding MGP_BALBcJ_T0046905.1 MGP_BALBcJ_G0023507.1 mouse_genomes_project 17 32871646 32875017 + MGP_BALBcJ_P0046905 Zbtb22 protein_coding protein_coding MGP_BALBcJ_T0013269.1 MGP_BALBcJ_G0011366.1 mouse_genomes_project 17 75342554 75343133 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046804.1 MGP_BALBcJ_G0023484.1 mouse_genomes_project 17 31988286 32005421 + MGP_BALBcJ_P0046804 Zfp563 protein_coding protein_coding MGP_BALBcJ_T0046805.1 MGP_BALBcJ_G0023484.1 mouse_genomes_project 17 31988540 32003942 + MGP_BALBcJ_P0046805 Zfp563 protein_coding protein_coding MGP_BALBcJ_T0046806.1 MGP_BALBcJ_G0023484.1 mouse_genomes_project 17 31991434 32004276 + MGP_BALBcJ_P0046806 Zfp563 protein_coding protein_coding MGP_BALBcJ_T0047954.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217278 47234089 + MGP_BALBcJ_P0047954 protein_coding protein_coding MGP_BALBcJ_T0047955.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217282 47234091 + MGP_BALBcJ_P0047955 protein_coding protein_coding MGP_BALBcJ_T0047956.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217283 47231314 + protein_coding retained_intron MGP_BALBcJ_T0047957.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217284 47230433 + MGP_BALBcJ_P0047957 protein_coding protein_coding MGP_BALBcJ_T0047958.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217289 47231358 + protein_coding retained_intron MGP_BALBcJ_T0047959.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217588 47234089 + MGP_BALBcJ_P0047959 protein_coding protein_coding MGP_BALBcJ_T0047960.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47217588 47234088 + MGP_BALBcJ_P0047960 protein_coding protein_coding MGP_BALBcJ_T0047961.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47219551 47233209 + protein_coding retained_intron MGP_BALBcJ_T0047962.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47225710 47233229 + protein_coding processed_transcript MGP_BALBcJ_T0047963.1 MGP_BALBcJ_G0023803.1 mouse_genomes_project 17 47230837 47236412 + protein_coding retained_intron MGP_BALBcJ_T0046661.1 MGP_BALBcJ_G0023449.1 mouse_genomes_project 17 30092222 30116173 - MGP_BALBcJ_P0046661 Rsph1 protein_coding protein_coding MGP_BALBcJ_T0045714.1 MGP_BALBcJ_G0023211.1 mouse_genomes_project 17 20713809 20736809 + Zfp946 protein_coding processed_transcript MGP_BALBcJ_T0045715.1 MGP_BALBcJ_G0023211.1 mouse_genomes_project 17 20713846 20746029 + MGP_BALBcJ_P0045715 Zfp946 protein_coding protein_coding MGP_BALBcJ_T0045716.1 MGP_BALBcJ_G0023211.1 mouse_genomes_project 17 20713855 20746029 + MGP_BALBcJ_P0045716 Zfp946 protein_coding protein_coding MGP_BALBcJ_T0045717.1 MGP_BALBcJ_G0023211.1 mouse_genomes_project 17 20740496 20745177 + MGP_BALBcJ_P0045717 Zfp946 protein_coding protein_coding MGP_BALBcJ_T0047120.1 MGP_BALBcJ_G0023550.1 mouse_genomes_project 17 33675430 33679627 + MGP_BALBcJ_P0047120 Prrt1 protein_coding protein_coding MGP_BALBcJ_T0047121.1 MGP_BALBcJ_G0023550.1 mouse_genomes_project 17 33677301 33678898 + Prrt1 protein_coding retained_intron MGP_BALBcJ_T0048317.1 MGP_BALBcJ_G0023927.1 mouse_genomes_project 17 58940724 58954489 - MGP_BALBcJ_P0048317 Nudt12 protein_coding protein_coding MGP_BALBcJ_T0048318.1 MGP_BALBcJ_G0023927.1 mouse_genomes_project 17 58941217 58944824 - Nudt12 protein_coding retained_intron MGP_BALBcJ_T0048319.1 MGP_BALBcJ_G0023927.1 mouse_genomes_project 17 58947511 58954385 - MGP_BALBcJ_P0048319 Nudt12 protein_coding protein_coding MGP_BALBcJ_T0047945.1 MGP_BALBcJ_G0023797.1 mouse_genomes_project 17 46632871 46668392 - MGP_BALBcJ_P0047945 Gltscr1l protein_coding protein_coding MGP_BALBcJ_T0013258.1 MGP_BALBcJ_G0011355.1 mouse_genomes_project 17 53915632 53916593 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046653.1 MGP_BALBcJ_G0023446.1 mouse_genomes_project 17 29999337 30003000 - MGP_BALBcJ_P0046653 Tff1 protein_coding protein_coding MGP_BALBcJ_T0006917.1 MGP_BALBcJ_G0005691.1 mouse_genomes_project 17 32989900 32990005 - Gm26940 lincRNA lincRNA MGP_BALBcJ_T0099554.1 MGP_BALBcJ_G0037590.1 mouse_genomes_project 17 4696923 4697088 - Gm23050 snRNA snRNA MGP_BALBcJ_T0046495.1 MGP_BALBcJ_G0023405.1 mouse_genomes_project 17 27285898 27298215 + MGP_BALBcJ_P0046495 Armc12 protein_coding protein_coding MGP_BALBcJ_T0046735.1 MGP_BALBcJ_G0023463.1 mouse_genomes_project 17 31170659 31188351 - MGP_BALBcJ_P0046735 Akap8 protein_coding protein_coding MGP_BALBcJ_T0048146.1 MGP_BALBcJ_G0023852.1 mouse_genomes_project 17 53563307 53577858 - MGP_BALBcJ_P0048146 Sgol1 protein_coding protein_coding MGP_BALBcJ_T0048147.1 MGP_BALBcJ_G0023852.1 mouse_genomes_project 17 53576085 53577811 - Sgol1 protein_coding processed_transcript MGP_BALBcJ_T0048148.1 MGP_BALBcJ_G0023852.1 mouse_genomes_project 17 53576232 53577803 - Sgol1 protein_coding processed_transcript MGP_BALBcJ_T0046307.1 MGP_BALBcJ_G0023365.1 mouse_genomes_project 17 25130988 25133918 - MGP_BALBcJ_P0046307 Dusp1 protein_coding protein_coding MGP_BALBcJ_T0046308.1 MGP_BALBcJ_G0023365.1 mouse_genomes_project 17 25130989 25133873 - Dusp1 protein_coding retained_intron MGP_BALBcJ_T0046309.1 MGP_BALBcJ_G0023365.1 mouse_genomes_project 17 25131914 25133122 - Dusp1 protein_coding retained_intron MGP_BALBcJ_T0048301.1 MGP_BALBcJ_G0023919.1 mouse_genomes_project 17 57203777 57216710 - MGP_BALBcJ_P0048301 Gpr108 protein_coding protein_coding MGP_BALBcJ_T0102311.1 MGP_BALBcJ_G0040127.1 mouse_genomes_project 17 32858901 32859291 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0102347.1 MGP_BALBcJ_G0040163.1 mouse_genomes_project 17 36084394 36133499 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0046160.1 MGP_BALBcJ_G0023333.1 mouse_genomes_project 17 24393831 24396306 - MGP_BALBcJ_P0046160 Metrn protein_coding protein_coding MGP_BALBcJ_T0046161.1 MGP_BALBcJ_G0023333.1 mouse_genomes_project 17 24394207 24396397 - MGP_BALBcJ_P0046161 Metrn protein_coding protein_coding MGP_BALBcJ_T0013202.1 MGP_BALBcJ_G0011299.1 mouse_genomes_project 17 26521266 26522105 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048745.1 MGP_BALBcJ_G0024075.1 mouse_genomes_project 17 89334557 89550567 - MGP_BALBcJ_P0048745 Fshr protein_coding protein_coding MGP_BALBcJ_T0048600.1 MGP_BALBcJ_G0024018.1 mouse_genomes_project 17 80456222 80458771 + Gemin6 protein_coding processed_transcript MGP_BALBcJ_T0048601.1 MGP_BALBcJ_G0024018.1 mouse_genomes_project 17 80456222 80460450 + MGP_BALBcJ_P0048601 Gemin6 protein_coding protein_coding MGP_BALBcJ_T0048449.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71288941 71341962 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048450.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71289937 71339137 + MGP_BALBcJ_P0048450 Lpin2 protein_coding protein_coding MGP_BALBcJ_T0048451.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71290104 71329584 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048452.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71311725 71338337 + MGP_BALBcJ_P0048452 Lpin2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048453.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71311847 71356730 + MGP_BALBcJ_P0048453 Lpin2 protein_coding protein_coding MGP_BALBcJ_T0048454.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71338264 71344934 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048455.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71345512 71346251 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048456.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71345522 71353338 + MGP_BALBcJ_P0048456 Lpin2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048457.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71347488 71351713 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048458.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71347589 71350366 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048459.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71349282 71352792 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0048460.1 MGP_BALBcJ_G0023964.1 mouse_genomes_project 17 71352915 71354220 + Lpin2 protein_coding retained_intron MGP_BALBcJ_T0046275.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815437 24823783 + Rgs11 protein_coding processed_transcript MGP_BALBcJ_T0046276.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815444 24823787 + MGP_BALBcJ_P0046276 Rgs11 protein_coding protein_coding MGP_BALBcJ_T0046277.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815448 24823792 + MGP_BALBcJ_P0046277 Rgs11 protein_coding protein_coding MGP_BALBcJ_T0046278.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815449 24816319 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046279.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815451 24816122 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046280.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815462 24823785 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046281.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815466 24816461 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046282.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815488 24819303 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046283.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24815498 24816583 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046284.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24819950 24823785 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0046285.1 MGP_BALBcJ_G0023359.1 mouse_genomes_project 17 24820338 24823783 + Rgs11 protein_coding retained_intron MGP_BALBcJ_T0013178.1 MGP_BALBcJ_G0011275.1 mouse_genomes_project 17 2883748 2884046 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048320.1 MGP_BALBcJ_G0023928.1 mouse_genomes_project 17 62630026 62910269 - MGP_BALBcJ_P0048320 Efna5 protein_coding protein_coding MGP_BALBcJ_T0048321.1 MGP_BALBcJ_G0023928.1 mouse_genomes_project 17 62633158 62910096 - MGP_BALBcJ_P0048321 Efna5 protein_coding protein_coding MGP_BALBcJ_T0045527.1 MGP_BALBcJ_G0023126.1 mouse_genomes_project 17 10303190 11122439 + MGP_BALBcJ_P0045527 Sod2 protein_coding protein_coding MGP_BALBcJ_T0010156.1 MGP_BALBcJ_G0008281.1 mouse_genomes_project 17 22539742 22539823 + Gm27700 miRNA miRNA MGP_BALBcJ_T0047902.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46323619 46324119 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047903.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46323652 46370998 - MGP_BALBcJ_P0047903 Cul9 protein_coding protein_coding MGP_BALBcJ_T0047904.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46323657 46344548 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047905.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46323663 46370911 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047906.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46324844 46349638 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047907.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46342279 46346523 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047908.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46343342 46344454 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047909.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46343342 46348996 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047910.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46352240 46362364 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0047911.1 MGP_BALBcJ_G0023781.1 mouse_genomes_project 17 46353697 46362624 - Cul9 protein_coding retained_intron MGP_BALBcJ_T0046831.1 MGP_BALBcJ_G0023493.1 mouse_genomes_project 17 32477188 32529210 + MGP_BALBcJ_P0046831 Myo1f protein_coding protein_coding MGP_BALBcJ_T0046832.1 MGP_BALBcJ_G0023493.1 mouse_genomes_project 17 32477214 32529206 + MGP_BALBcJ_P0046832 Myo1f protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046833.1 MGP_BALBcJ_G0023493.1 mouse_genomes_project 17 32477234 32498453 + MGP_BALBcJ_P0046833 Myo1f protein_coding protein_coding MGP_BALBcJ_T0046834.1 MGP_BALBcJ_G0023493.1 mouse_genomes_project 17 32502884 32529212 + Myo1f protein_coding retained_intron MGP_BALBcJ_T0047699.1 MGP_BALBcJ_G0023726.1 mouse_genomes_project 17 40713617 40726787 - MGP_BALBcJ_P0047699 Cenpq protein_coding protein_coding MGP_BALBcJ_T0047025.1 MGP_BALBcJ_G0023530.1 mouse_genomes_project 17 33210361 33223254 + MGP_BALBcJ_P0047025 Tap2 protein_coding protein_coding MGP_BALBcJ_T0047026.1 MGP_BALBcJ_G0023530.1 mouse_genomes_project 17 33210914 33212204 + MGP_BALBcJ_P0047026 Tap2 protein_coding protein_coding MGP_BALBcJ_T0047027.1 MGP_BALBcJ_G0023530.1 mouse_genomes_project 17 33211400 33223251 + Tap2 protein_coding retained_intron MGP_BALBcJ_T0047028.1 MGP_BALBcJ_G0023530.1 mouse_genomes_project 17 33211943 33212403 + MGP_BALBcJ_P0047028 Tap2 protein_coding protein_coding MGP_BALBcJ_T0047029.1 MGP_BALBcJ_G0023530.1 mouse_genomes_project 17 33214478 33215992 + Tap2 protein_coding processed_transcript MGP_BALBcJ_T0101867.1 MGP_BALBcJ_G0039777.1 mouse_genomes_project 17 32916296 32917881 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101868.1 MGP_BALBcJ_G0039777.1 mouse_genomes_project 17 32916459 32918264 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0047989.1 MGP_BALBcJ_G0023811.1 mouse_genomes_project 17 47473219 47486957 + MGP_BALBcJ_P0047989 Med20 protein_coding protein_coding MGP_BALBcJ_T0047990.1 MGP_BALBcJ_G0023811.1 mouse_genomes_project 17 47473222 47482121 + Med20 protein_coding retained_intron MGP_BALBcJ_T0047993.1 MGP_BALBcJ_G0023811.1 mouse_genomes_project 17 47473245 47486787 + Med20 protein_coding retained_intron MGP_BALBcJ_T0047995.1 MGP_BALBcJ_G0023811.1 mouse_genomes_project 17 47473258 47474933 + Med20 protein_coding retained_intron MGP_BALBcJ_T0047855.1 MGP_BALBcJ_G0023768.1 mouse_genomes_project 17 46015310 46054412 + MGP_BALBcJ_P0047855 Xpo5 protein_coding protein_coding MGP_BALBcJ_T0099572.1 MGP_BALBcJ_G0037608.1 mouse_genomes_project 17 46045312 46045419 - Gm22474 snRNA snRNA MGP_BALBcJ_T0100843.1 MGP_BALBcJ_G0038879.1 mouse_genomes_project 17 63236411 63236528 + Gm24730 snoRNA snoRNA MGP_BALBcJ_T0006910.1 MGP_BALBcJ_G0005685.1 mouse_genomes_project 17 30400400 30402385 + 4833413E03Rik lincRNA lincRNA MGP_BALBcJ_T0006911.1 MGP_BALBcJ_G0005685.1 mouse_genomes_project 17 30401466 30402388 + 4833413E03Rik lincRNA lincRNA MGP_BALBcJ_T0048570.1 MGP_BALBcJ_G0024005.1 mouse_genomes_project 17 79124800 79143127 - MGP_BALBcJ_P0048570 Cebpz protein_coding protein_coding MGP_BALBcJ_T0045443.1 MGP_BALBcJ_G0023101.1 mouse_genomes_project 17 5613759 5630005 + MGP_BALBcJ_P0045443 protein_coding protein_coding MGP_BALBcJ_T0045581.1 MGP_BALBcJ_G0023140.1 mouse_genomes_project 17 13018110 13038928 - MGP_BALBcJ_P0045581 Psmb1 protein_coding protein_coding MGP_BALBcJ_T0013254.1 MGP_BALBcJ_G0011351.1 mouse_genomes_project 17 53686745 53687096 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045931.1 MGP_BALBcJ_G0023274.1 mouse_genomes_project 17 23177340 23183482 + MGP_BALBcJ_P0045931 Nthl1 protein_coding protein_coding MGP_BALBcJ_T0013271.1 MGP_BALBcJ_G0011368.1 mouse_genomes_project 17 78877531 78881959 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0045651.1 MGP_BALBcJ_G0023169.1 mouse_genomes_project 17 18160669 18173493 - MGP_BALBcJ_P0045651 protein_coding protein_coding MGP_BALBcJ_T0048658.1 MGP_BALBcJ_G0024044.1 mouse_genomes_project 17 85199382 85269525 + MGP_BALBcJ_P0048658 Ppm1b protein_coding protein_coding MGP_BALBcJ_T0048659.1 MGP_BALBcJ_G0024044.1 mouse_genomes_project 17 85200641 85259507 + MGP_BALBcJ_P0048659 Ppm1b protein_coding protein_coding MGP_BALBcJ_T0048660.1 MGP_BALBcJ_G0024044.1 mouse_genomes_project 17 85238179 85269525 + MGP_BALBcJ_P0048660 Ppm1b protein_coding protein_coding MGP_BALBcJ_T0010153.1 MGP_BALBcJ_G0008278.1 mouse_genomes_project 17 15427396 15427489 + Mirlet7e miRNA miRNA MGP_BALBcJ_T0010178.1 MGP_BALBcJ_G0008303.1 mouse_genomes_project 17 32801478 32801536 - Gm27775 miRNA miRNA MGP_BALBcJ_T0045692.1 MGP_BALBcJ_G0023201.1 mouse_genomes_project 17 19886275 19904888 + MGP_BALBcJ_P0045692 Zfp760 protein_coding protein_coding MGP_BALBcJ_T0048676.1 MGP_BALBcJ_G0024053.1 mouse_genomes_project 17 87039457 87121029 + MGP_BALBcJ_P0048676 Epas1 protein_coding protein_coding MGP_BALBcJ_T0006921.1 MGP_BALBcJ_G0005695.1 mouse_genomes_project 17 34277432 34279500 + Gm17705 lincRNA lincRNA MGP_BALBcJ_T0003745.1 MGP_BALBcJ_G0003371.1 mouse_genomes_project 17 35440773 35445669 + antisense antisense MGP_BALBcJ_T0003772.1 MGP_BALBcJ_G0003391.1 mouse_genomes_project 17 85870891 85872531 - Gm28528 antisense antisense MGP_BALBcJ_T0048675.1 MGP_BALBcJ_G0024052.1 mouse_genomes_project 17 86778595 86786136 - MGP_BALBcJ_P0048675 Gm10309 protein_coding protein_coding MGP_BALBcJ_T0048051.1 MGP_BALBcJ_G0023825.1 mouse_genomes_project 17 48070770 48086685 - MGP_BALBcJ_P0048051 protein_coding protein_coding MGP_BALBcJ_T0006871.1 MGP_BALBcJ_G0005654.1 mouse_genomes_project 17 3895574 3930923 - Gm2885 lincRNA lincRNA MGP_BALBcJ_T0047260.1 MGP_BALBcJ_G0023577.1 mouse_genomes_project 17 34172744 34176221 - MGP_BALBcJ_P0047260 G6b protein_coding protein_coding MGP_BALBcJ_T0047261.1 MGP_BALBcJ_G0023577.1 mouse_genomes_project 17 34174377 34176207 - MGP_BALBcJ_P0047261 G6b protein_coding protein_coding MGP_BALBcJ_T0048371.1 MGP_BALBcJ_G0023945.1 mouse_genomes_project 17 66201923 66232792 + MGP_BALBcJ_P0048371 Ddx11 protein_coding protein_coding MGP_BALBcJ_T0048372.1 MGP_BALBcJ_G0023945.1 mouse_genomes_project 17 66202190 66229007 + MGP_BALBcJ_P0048372 Ddx11 protein_coding unknown_likely_coding MGP_BALBcJ_T0048597.1 MGP_BALBcJ_G0024016.1 mouse_genomes_project 17 80429719 80437549 - MGP_BALBcJ_P0048597 Srsf7 protein_coding protein_coding MGP_BALBcJ_T0048223.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56488524 56492076 - MGP_BALBcJ_P0048223 Safb2 protein_coding protein_coding MGP_BALBcJ_T0048224.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56488532 56492127 - MGP_BALBcJ_P0048224 Safb2 protein_coding protein_coding MGP_BALBcJ_T0048225.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56490498 56512070 - MGP_BALBcJ_P0048225 Safb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048226.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56490498 56512143 - MGP_BALBcJ_P0048226 Safb2 protein_coding protein_coding MGP_BALBcJ_T0048227.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56490498 56494575 - MGP_BALBcJ_P0048227 Safb2 protein_coding protein_coding MGP_BALBcJ_T0048228.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56490508 56500056 - Safb2 protein_coding processed_transcript MGP_BALBcJ_T0048229.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56490864 56494578 - MGP_BALBcJ_P0048229 Safb2 protein_coding protein_coding MGP_BALBcJ_T0048230.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56493556 56498998 - MGP_BALBcJ_P0048230 Safb2 protein_coding protein_coding MGP_BALBcJ_T0048231.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56495092 56496994 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0048232.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56496454 56502655 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0048233.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56496550 56512082 - MGP_BALBcJ_P0048233 Safb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048234.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56497640 56503077 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0048235.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56498585 56499237 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0048236.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56498827 56512120 - MGP_BALBcJ_P0048236 Safb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048237.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56503888 56510604 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0048238.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56504017 56511859 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0048239.1 MGP_BALBcJ_G0023887.1 mouse_genomes_project 17 56506430 56512069 - Safb2 protein_coding retained_intron MGP_BALBcJ_T0102342.1 MGP_BALBcJ_G0040158.1 mouse_genomes_project 17 36063453 36065045 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0045521.1 MGP_BALBcJ_G0023125.1 mouse_genomes_project 17 10259329 10287378 - MGP_BALBcJ_P0045521 protein_coding protein_coding MGP_BALBcJ_T0045522.1 MGP_BALBcJ_G0023125.1 mouse_genomes_project 17 10259332 10287140 - MGP_BALBcJ_P0045522 protein_coding protein_coding MGP_BALBcJ_T0045523.1 MGP_BALBcJ_G0023125.1 mouse_genomes_project 17 10265225 10287073 - MGP_BALBcJ_P0045523 protein_coding protein_coding MGP_BALBcJ_T0045524.1 MGP_BALBcJ_G0023125.1 mouse_genomes_project 17 10266092 10287427 - MGP_BALBcJ_P0045524 protein_coding protein_coding MGP_BALBcJ_T0045525.1 MGP_BALBcJ_G0023125.1 mouse_genomes_project 17 10273673 10279150 - MGP_BALBcJ_P0045525 protein_coding protein_coding MGP_BALBcJ_T0045526.1 MGP_BALBcJ_G0023125.1 mouse_genomes_project 17 10274686 10276881 - protein_coding processed_transcript MGP_BALBcJ_T0048665.1 MGP_BALBcJ_G0024048.1 mouse_genomes_project 17 85865203 85876746 + MGP_BALBcJ_P0048665 Six3 protein_coding protein_coding MGP_BALBcJ_T0048666.1 MGP_BALBcJ_G0024048.1 mouse_genomes_project 17 85872363 85877714 + MGP_BALBcJ_P0048666 Six3 protein_coding protein_coding MGP_BALBcJ_T0048667.1 MGP_BALBcJ_G0024048.1 mouse_genomes_project 17 85872560 85880825 + MGP_BALBcJ_P0048667 Six3 protein_coding protein_coding MGP_BALBcJ_T0047718.1 MGP_BALBcJ_G0023738.1 mouse_genomes_project 17 43354703 43388321 + MGP_BALBcJ_P0047718 Pla2g7 protein_coding protein_coding MGP_BALBcJ_T0047719.1 MGP_BALBcJ_G0023738.1 mouse_genomes_project 17 43354874 43399748 + MGP_BALBcJ_P0047719 Pla2g7 protein_coding protein_coding MGP_BALBcJ_T0047720.1 MGP_BALBcJ_G0023738.1 mouse_genomes_project 17 43355080 43382528 + MGP_BALBcJ_P0047720 Pla2g7 protein_coding protein_coding MGP_BALBcJ_T0047721.1 MGP_BALBcJ_G0023738.1 mouse_genomes_project 17 43355240 43377410 + Pla2g7 protein_coding processed_transcript MGP_BALBcJ_T0047722.1 MGP_BALBcJ_G0023738.1 mouse_genomes_project 17 43355278 43394797 + MGP_BALBcJ_P0047722 Pla2g7 protein_coding protein_coding MGP_BALBcJ_T0047723.1 MGP_BALBcJ_G0023738.1 mouse_genomes_project 17 43355320 43395172 + Pla2g7 protein_coding retained_intron MGP_BALBcJ_T0013229.1 MGP_BALBcJ_G0011326.1 mouse_genomes_project 17 36605684 36606281 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0046699.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30455362 30479799 - MGP_BALBcJ_P0046699 Cbs protein_coding protein_coding MGP_BALBcJ_T0046700.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30455379 30479765 - MGP_BALBcJ_P0046700 Cbs protein_coding protein_coding MGP_BALBcJ_T0046701.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30455380 30479765 - MGP_BALBcJ_P0046701 Cbs protein_coding protein_coding MGP_BALBcJ_T0046702.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30459907 30460616 - Cbs protein_coding retained_intron MGP_BALBcJ_T0046703.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30463722 30468943 - Cbs protein_coding processed_transcript MGP_BALBcJ_T0046704.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30464247 30465836 - Cbs protein_coding processed_transcript MGP_BALBcJ_T0046705.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30467858 30479390 - MGP_BALBcJ_P0046705 Cbs protein_coding protein_coding MGP_BALBcJ_T0046706.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30467912 30479249 - MGP_BALBcJ_P0046706 Cbs protein_coding protein_coding MGP_BALBcJ_T0046707.1 MGP_BALBcJ_G0023455.1 mouse_genomes_project 17 30470279 30479249 - MGP_BALBcJ_P0046707 Cbs protein_coding protein_coding MGP_BALBcJ_T0013204.1 MGP_BALBcJ_G0011301.1 mouse_genomes_project 17 32938365 32938627 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100835.1 MGP_BALBcJ_G0038871.1 mouse_genomes_project 17 34274876 34275010 - Gm23442 snoRNA snoRNA MGP_BALBcJ_T0048270.1 MGP_BALBcJ_G0023903.1 mouse_genomes_project 17 56914562 56943333 - MGP_BALBcJ_P0048270 Acer1 protein_coding protein_coding MGP_BALBcJ_T0010150.1 MGP_BALBcJ_G0008275.1 mouse_genomes_project 17 10136668 10136782 - Gm24085 miRNA miRNA MGP_BALBcJ_T0046036.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23661946 23679350 - Telo2 protein_coding retained_intron MGP_BALBcJ_T0046037.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23661946 23679410 - MGP_BALBcJ_P0046037 Telo2 protein_coding protein_coding MGP_BALBcJ_T0046038.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23661953 23679348 - MGP_BALBcJ_P0046038 Telo2 protein_coding protein_coding MGP_BALBcJ_T0046039.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23661993 23666028 - Telo2 protein_coding processed_transcript MGP_BALBcJ_T0046040.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23662001 23670294 - Telo2 protein_coding processed_transcript MGP_BALBcJ_T0046041.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23662200 23663812 - Telo2 protein_coding processed_transcript MGP_BALBcJ_T0046042.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23663142 23671588 - Telo2 protein_coding retained_intron MGP_BALBcJ_T0046043.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23674270 23678635 - Telo2 protein_coding processed_transcript MGP_BALBcJ_T0046044.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23674567 23677094 - Telo2 protein_coding processed_transcript MGP_BALBcJ_T0046045.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23676647 23678755 - Telo2 protein_coding processed_transcript MGP_BALBcJ_T0046046.1 MGP_BALBcJ_G0023302.1 mouse_genomes_project 17 23677582 23679397 - Telo2 protein_coding retained_intron MGP_BALBcJ_T0046477.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27100493 27104045 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046478.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27100493 27114610 - MGP_BALBcJ_P0046478 Tulp1 protein_coding protein_coding MGP_BALBcJ_T0046479.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27100494 27108074 - MGP_BALBcJ_P0046479 Tulp1 protein_coding protein_coding MGP_BALBcJ_T0046480.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27100832 27108042 - MGP_BALBcJ_P0046480 Tulp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046481.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27101508 27112382 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046482.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27101516 27105355 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046483.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27102040 27108609 - MGP_BALBcJ_P0046483 Tulp1 protein_coding protein_coding MGP_BALBcJ_T0046484.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27104795 27114644 - MGP_BALBcJ_P0046484 Tulp1 protein_coding protein_coding MGP_BALBcJ_T0046485.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27107829 27111894 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046486.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27111031 27112419 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046487.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27112156 27114608 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046488.1 MGP_BALBcJ_G0023403.1 mouse_genomes_project 17 27113147 27114601 - Tulp1 protein_coding retained_intron MGP_BALBcJ_T0046819.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32445662 32475254 + MGP_BALBcJ_P0046819 Adamts10 protein_coding protein_coding MGP_BALBcJ_T0046820.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32445662 32475254 + MGP_BALBcJ_P0046820 Adamts10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046821.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32445667 32475253 + MGP_BALBcJ_P0046821 Adamts10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046822.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32445668 32450633 + Adamts10 protein_coding retained_intron MGP_BALBcJ_T0046823.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32445684 32475254 + MGP_BALBcJ_P0046823 Adamts10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046824.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32449782 32474934 + MGP_BALBcJ_P0046824 Adamts10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046825.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32449782 32474934 + MGP_BALBcJ_P0046825 Adamts10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046826.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32453098 32475253 + MGP_BALBcJ_P0046826 Adamts10 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0046827.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32453207 32464721 + Adamts10 protein_coding processed_transcript MGP_BALBcJ_T0046828.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32458825 32475254 + Adamts10 protein_coding retained_intron MGP_BALBcJ_T0046829.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32459208 32475256 + Adamts10 protein_coding retained_intron MGP_BALBcJ_T0046830.1 MGP_BALBcJ_G0023492.1 mouse_genomes_project 17 32465021 32475268 + Adamts10 protein_coding retained_intron MGP_BALBcJ_T0003744.1 MGP_BALBcJ_G0003370.1 mouse_genomes_project 17 35260205 35280692 + antisense antisense MGP_BALBcJ_T0047129.1 MGP_BALBcJ_G0023553.1 mouse_genomes_project 17 33713619 33772194 + MGP_BALBcJ_P0047129 Tnxb protein_coding unknown_likely_coding MGP_BALBcJ_T0046576.1 MGP_BALBcJ_G0023424.1 mouse_genomes_project 17 28063429 28098067 + MGP_BALBcJ_P0046576 BC004004 protein_coding protein_coding MGP_BALBcJ_T0046577.1 MGP_BALBcJ_G0023424.1 mouse_genomes_project 17 28063484 28096707 + MGP_BALBcJ_P0046577 BC004004 protein_coding protein_coding MGP_BALBcJ_T0046578.1 MGP_BALBcJ_G0023424.1 mouse_genomes_project 17 28063592 28079852 + BC004004 protein_coding retained_intron MGP_BALBcJ_T0046579.1 MGP_BALBcJ_G0023424.1 mouse_genomes_project 17 28068538 28096711 + MGP_BALBcJ_P0046579 BC004004 protein_coding protein_coding MGP_BALBcJ_T0046580.1 MGP_BALBcJ_G0023424.1 mouse_genomes_project 17 28093565 28096711 + BC004004 protein_coding processed_transcript MGP_BALBcJ_T0045813.1 MGP_BALBcJ_G0023247.1 mouse_genomes_project 17 22479329 22481074 - MGP_BALBcJ_P0045813 Sbpl protein_coding protein_coding MGP_BALBcJ_T0011416.1 MGP_BALBcJ_G0009541.1 mouse_genomes_project 17 85864977 85865200 + Gm27801 misc_RNA misc_RNA MGP_BALBcJ_T0049404.1 MGP_BALBcJ_G0024314.1 mouse_genomes_project 18 34981018 35077409 + MGP_BALBcJ_P0049404 Pcdhga10 protein_coding protein_coding MGP_BALBcJ_T0017578.1 MGP_BALBcJ_G0015298.1 mouse_genomes_project 18 34378546 34397208 - Gm10544 processed_transcript antisense MGP_BALBcJ_T0017579.1 MGP_BALBcJ_G0015298.1 mouse_genomes_project 18 34394286 34397192 - Gm10544 processed_transcript antisense MGP_BALBcJ_T0017580.1 MGP_BALBcJ_G0015298.1 mouse_genomes_project 18 34395447 34397200 - Gm10544 processed_transcript retained_intron MGP_BALBcJ_T0003790.1 MGP_BALBcJ_G0003405.1 mouse_genomes_project 18 34153121 34154315 - Gm37751 antisense antisense MGP_BALBcJ_T0013301.1 MGP_BALBcJ_G0011398.1 mouse_genomes_project 18 21440612 21442091 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049510.1 MGP_BALBcJ_G0024343.1 mouse_genomes_project 18 39459432 39459726 + MGP_BALBcJ_P0049510 Gm5689 protein_coding protein_coding MGP_BALBcJ_T0049685.1 MGP_BALBcJ_G0024417.1 mouse_genomes_project 18 55232309 55300784 + MGP_BALBcJ_P0049685 Slc12a2 protein_coding protein_coding MGP_BALBcJ_T0100884.1 MGP_BALBcJ_G0038920.1 mouse_genomes_project 18 72563752 72563817 + Gm26202 snoRNA snoRNA MGP_BALBcJ_T0049796.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60391303 60413670 + MGP_BALBcJ_P0049796 Napg protein_coding protein_coding MGP_BALBcJ_T0049797.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60391328 60394121 + Napg protein_coding retained_intron MGP_BALBcJ_T0049798.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60391368 60411152 + MGP_BALBcJ_P0049798 Napg protein_coding protein_coding MGP_BALBcJ_T0049799.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60391389 60396252 + Napg protein_coding retained_intron MGP_BALBcJ_T0049800.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60393705 60396480 + Napg protein_coding retained_intron MGP_BALBcJ_T0049801.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60399420 60405297 + Napg protein_coding processed_transcript MGP_BALBcJ_T0049802.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60399503 60408778 + Napg protein_coding retained_intron MGP_BALBcJ_T0049803.1 MGP_BALBcJ_G0024463.1 mouse_genomes_project 18 60401676 60409234 + Napg protein_coding processed_transcript MGP_BALBcJ_T0100871.1 MGP_BALBcJ_G0038907.1 mouse_genomes_project 18 32744448 32744644 + Snora74a snoRNA snoRNA MGP_BALBcJ_T0049972.1 MGP_BALBcJ_G0024509.1 mouse_genomes_project 18 67989673 68009071 - MGP_BALBcJ_P0049972 4930503L19Rik protein_coding protein_coding MGP_BALBcJ_T0049869.1 MGP_BALBcJ_G0024483.1 mouse_genomes_project 18 63918629 63925576 + MGP_BALBcJ_P0049869 Pmaip1 protein_coding protein_coding MGP_BALBcJ_T0013298.1 MGP_BALBcJ_G0011395.1 mouse_genomes_project 18 13834326 13834967 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010217.1 MGP_BALBcJ_G0008342.1 mouse_genomes_project 18 7660373 7660445 - Mir1a-2 miRNA miRNA MGP_BALBcJ_T0048891.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4714970 4767955 + MGP_BALBcJ_P0048891 Wac protein_coding protein_coding MGP_BALBcJ_T0048892.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4714983 4717786 + MGP_BALBcJ_P0048892 Wac protein_coding protein_coding MGP_BALBcJ_T0048893.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4715204 4767873 + MGP_BALBcJ_P0048893 Wac protein_coding protein_coding MGP_BALBcJ_T0048894.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4715334 4717711 + MGP_BALBcJ_P0048894 Wac protein_coding protein_coding MGP_BALBcJ_T0048895.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4715335 4774961 + MGP_BALBcJ_P0048895 Wac protein_coding protein_coding MGP_BALBcJ_T0048896.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4715639 4767873 + MGP_BALBcJ_P0048896 Wac protein_coding protein_coding MGP_BALBcJ_T0048897.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4715815 4762168 + MGP_BALBcJ_P0048897 Wac protein_coding protein_coding MGP_BALBcJ_T0048898.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4715836 4751664 + MGP_BALBcJ_P0048898 Wac protein_coding protein_coding MGP_BALBcJ_T0048899.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4717809 4767380 + MGP_BALBcJ_P0048899 Wac protein_coding protein_coding MGP_BALBcJ_T0048900.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4751646 4762175 + MGP_BALBcJ_P0048900 Wac protein_coding protein_coding MGP_BALBcJ_T0048901.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4756507 4762271 + Wac protein_coding retained_intron MGP_BALBcJ_T0048902.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4756525 4764387 + MGP_BALBcJ_P0048902 Wac protein_coding protein_coding MGP_BALBcJ_T0048903.1 MGP_BALBcJ_G0024098.1 mouse_genomes_project 18 4763522 4818138 + MGP_BALBcJ_P0048903 Wac protein_coding protein_coding MGP_BALBcJ_T0100886.1 MGP_BALBcJ_G0038922.1 mouse_genomes_project 18 77082967 77083088 - Gm25824 snoRNA snoRNA MGP_BALBcJ_T0049881.1 MGP_BALBcJ_G0024493.1 mouse_genomes_project 18 65067821 65068151 + MGP_BALBcJ_P0049881 protein_coding protein_coding MGP_BALBcJ_T0050071.1 MGP_BALBcJ_G0024538.1 mouse_genomes_project 18 74621848 74710172 + MGP_BALBcJ_P0050071 Pias2 protein_coding protein_coding MGP_BALBcJ_T0050072.1 MGP_BALBcJ_G0024538.1 mouse_genomes_project 18 74622820 74710172 + MGP_BALBcJ_P0050072 Pias2 protein_coding protein_coding MGP_BALBcJ_T0050073.1 MGP_BALBcJ_G0024538.1 mouse_genomes_project 18 74622820 74701403 + MGP_BALBcJ_P0050073 Pias2 protein_coding protein_coding MGP_BALBcJ_T0011426.1 MGP_BALBcJ_G0009551.1 mouse_genomes_project 18 14118702 14118934 - Gm24015 misc_RNA misc_RNA MGP_BALBcJ_T0050091.1 MGP_BALBcJ_G0024545.1 mouse_genomes_project 18 75346778 75355907 + MGP_BALBcJ_P0050091 Atp5a1 protein_coding protein_coding MGP_BALBcJ_T0050092.1 MGP_BALBcJ_G0024545.1 mouse_genomes_project 18 75347005 75355904 + MGP_BALBcJ_P0050092 Atp5a1 protein_coding protein_coding MGP_BALBcJ_T0050093.1 MGP_BALBcJ_G0024545.1 mouse_genomes_project 18 75347041 75355693 + MGP_BALBcJ_P0050093 Atp5a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050094.1 MGP_BALBcJ_G0024545.1 mouse_genomes_project 18 75351992 75354137 + Atp5a1 protein_coding retained_intron MGP_BALBcJ_T0050095.1 MGP_BALBcJ_G0024545.1 mouse_genomes_project 18 75352869 75354927 + Atp5a1 protein_coding retained_intron MGP_BALBcJ_T0050201.1 MGP_BALBcJ_G0024580.1 mouse_genomes_project 18 86246687 86341899 - protein_coding processed_transcript MGP_BALBcJ_T0050202.1 MGP_BALBcJ_G0024580.1 mouse_genomes_project 18 86250158 86484499 - protein_coding processed_transcript MGP_BALBcJ_T0050203.1 MGP_BALBcJ_G0024580.1 mouse_genomes_project 18 86450460 86484482 - MGP_BALBcJ_P0050203 protein_coding protein_coding MGP_BALBcJ_T0050204.1 MGP_BALBcJ_G0024580.1 mouse_genomes_project 18 86456286 86517413 - MGP_BALBcJ_P0050204 protein_coding protein_coding MGP_BALBcJ_T0050013.1 MGP_BALBcJ_G0024522.1 mouse_genomes_project 18 71750463 71755812 + MGP_BALBcJ_P0050013 Cxxc1 protein_coding protein_coding MGP_BALBcJ_T0003802.1 MGP_BALBcJ_G0003417.1 mouse_genomes_project 18 36633860 36656299 - Gm15337 antisense antisense MGP_BALBcJ_T0048988.1 MGP_BALBcJ_G0024125.1 mouse_genomes_project 18 9940260 9963106 + MGP_BALBcJ_P0048988 Impact protein_coding protein_coding MGP_BALBcJ_T0049787.1 MGP_BALBcJ_G0024458.1 mouse_genomes_project 18 59987617 59991462 - MGP_BALBcJ_P0049787 Spink7 protein_coding protein_coding MGP_BALBcJ_T0049854.1 MGP_BALBcJ_G0024478.1 mouse_genomes_project 18 63306093 63321305 + MGP_BALBcJ_P0049854 Grp protein_coding protein_coding MGP_BALBcJ_T0049855.1 MGP_BALBcJ_G0024478.1 mouse_genomes_project 18 63307224 63314021 + MGP_BALBcJ_P0049855 Grp protein_coding protein_coding MGP_BALBcJ_T0049856.1 MGP_BALBcJ_G0024478.1 mouse_genomes_project 18 63307234 63321304 + MGP_BALBcJ_P0049856 Grp protein_coding protein_coding MGP_BALBcJ_T0098551.1 MGP_BALBcJ_G0036605.1 mouse_genomes_project 18 31818740 31818859 + n-R5s25 rRNA rRNA MGP_BALBcJ_T0050205.1 MGP_BALBcJ_G0024581.1 mouse_genomes_project 18 86560522 86723889 + MGP_BALBcJ_P0050205 Rttn protein_coding protein_coding MGP_BALBcJ_T0100878.1 MGP_BALBcJ_G0038914.1 mouse_genomes_project 18 60951808 60951952 + Gm22210 snoRNA snoRNA MGP_BALBcJ_T0049702.1 MGP_BALBcJ_G0024428.1 mouse_genomes_project 18 57895274 57923016 + MGP_BALBcJ_P0049702 Dctn4 protein_coding protein_coding MGP_BALBcJ_T0049703.1 MGP_BALBcJ_G0024428.1 mouse_genomes_project 18 57895284 57923019 + MGP_BALBcJ_P0049703 Dctn4 protein_coding unknown_likely_coding MGP_BALBcJ_T0050014.1 MGP_BALBcJ_G0024523.1 mouse_genomes_project 18 71807452 71816850 + MGP_BALBcJ_P0050014 Mbd1 protein_coding unknown_likely_coding MGP_BALBcJ_T0050015.1 MGP_BALBcJ_G0024523.1 mouse_genomes_project 18 71807539 71821980 + MGP_BALBcJ_P0050015 Mbd1 protein_coding protein_coding MGP_BALBcJ_T0049122.1 MGP_BALBcJ_G0024189.1 mouse_genomes_project 18 29283212 29319506 + MGP_BALBcJ_P0049122 Iws1 protein_coding protein_coding MGP_BALBcJ_T0049371.1 MGP_BALBcJ_G0024289.1 mouse_genomes_project 18 34667269 34675956 + MGP_BALBcJ_P0049371 Pcdhb14 protein_coding protein_coding MGP_BALBcJ_T0049390.1 MGP_BALBcJ_G0024305.1 mouse_genomes_project 18 34923375 35077409 + MGP_BALBcJ_P0049390 Pcdhgb2 protein_coding protein_coding MGP_BALBcJ_T0049391.1 MGP_BALBcJ_G0024305.1 mouse_genomes_project 18 34923382 34927079 + Pcdhgb2 protein_coding retained_intron MGP_BALBcJ_T0100858.1 MGP_BALBcJ_G0038894.1 mouse_genomes_project 18 12858595 12858724 + Gm24228 snoRNA snoRNA MGP_BALBcJ_T0049574.1 MGP_BALBcJ_G0024374.1 mouse_genomes_project 18 43779841 43804645 - MGP_BALBcJ_P0049574 Fem1c protein_coding protein_coding MGP_BALBcJ_T0013300.1 MGP_BALBcJ_G0011397.1 mouse_genomes_project 18 18499949 18500249 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007024.1 MGP_BALBcJ_G0005770.1 mouse_genomes_project 18 75301421 75305211 - A330094K24Rik lincRNA lincRNA MGP_BALBcJ_T0013344.1 MGP_BALBcJ_G0011441.1 mouse_genomes_project 18 87536580 87537540 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013326.1 MGP_BALBcJ_G0011423.1 mouse_genomes_project 18 49773045 49773943 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003798.1 MGP_BALBcJ_G0003413.1 mouse_genomes_project 18 35041031 35043236 - BC037039 antisense antisense MGP_BALBcJ_T0049075.1 MGP_BALBcJ_G0024166.1 mouse_genomes_project 18 21687403 21735603 - MGP_BALBcJ_P0049075 Rprd1a protein_coding protein_coding MGP_BALBcJ_T0013314.1 MGP_BALBcJ_G0011411.1 mouse_genomes_project 18 36036135 36036987 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049252.1 MGP_BALBcJ_G0024235.1 mouse_genomes_project 18 32912314 32921359 - MGP_BALBcJ_P0049252 Ecscr protein_coding protein_coding MGP_BALBcJ_T0049253.1 MGP_BALBcJ_G0024235.1 mouse_genomes_project 18 32912314 32920494 - MGP_BALBcJ_P0049253 Ecscr protein_coding protein_coding MGP_BALBcJ_T0049254.1 MGP_BALBcJ_G0024235.1 mouse_genomes_project 18 32912501 32916519 - MGP_BALBcJ_P0049254 Ecscr protein_coding protein_coding MGP_BALBcJ_T0049255.1 MGP_BALBcJ_G0024235.1 mouse_genomes_project 18 32912988 32916519 - MGP_BALBcJ_P0049255 Ecscr protein_coding protein_coding MGP_BALBcJ_T0049256.1 MGP_BALBcJ_G0024235.1 mouse_genomes_project 18 32916476 32917116 - Ecscr protein_coding processed_transcript MGP_BALBcJ_T0049257.1 MGP_BALBcJ_G0024235.1 mouse_genomes_project 18 32916743 32921296 - Ecscr protein_coding processed_transcript MGP_BALBcJ_T0098348.1 MGP_BALBcJ_G0036402.1 mouse_genomes_project 18 75284071 75285303 + pseudogene pseudogene MGP_BALBcJ_T0049704.1 MGP_BALBcJ_G0024429.1 mouse_genomes_project 18 57924995 57937053 + MGP_BALBcJ_P0049704 Rbm22 protein_coding protein_coding MGP_BALBcJ_T0049705.1 MGP_BALBcJ_G0024429.1 mouse_genomes_project 18 57925023 57925746 + Rbm22 protein_coding retained_intron MGP_BALBcJ_T0049706.1 MGP_BALBcJ_G0024429.1 mouse_genomes_project 18 57925027 57934546 + Rbm22 protein_coding retained_intron MGP_BALBcJ_T0049707.1 MGP_BALBcJ_G0024429.1 mouse_genomes_project 18 57934664 57935389 + Rbm22 protein_coding retained_intron MGP_BALBcJ_T0049708.1 MGP_BALBcJ_G0024429.1 mouse_genomes_project 18 57934847 57936235 + Rbm22 protein_coding retained_intron MGP_BALBcJ_T0010228.1 MGP_BALBcJ_G0008353.1 mouse_genomes_project 18 35226930 35226989 - Mir6980 miRNA miRNA MGP_BALBcJ_T0010218.1 MGP_BALBcJ_G0008343.1 mouse_genomes_project 18 8785633 8785711 - Mir1901 miRNA miRNA MGP_BALBcJ_T0011438.1 MGP_BALBcJ_G0009563.1 mouse_genomes_project 18 41072557 41072870 + Gm23894 misc_RNA misc_RNA MGP_BALBcJ_T0050196.1 MGP_BALBcJ_G0024578.1 mouse_genomes_project 18 83984997 84091783 + MGP_BALBcJ_P0050196 Neto1 protein_coding protein_coding MGP_BALBcJ_T0050184.1 MGP_BALBcJ_G0024574.1 mouse_genomes_project 18 82303350 82313541 + MGP_BALBcJ_P0050184 Fam69c protein_coding protein_coding MGP_BALBcJ_T0050185.1 MGP_BALBcJ_G0024574.1 mouse_genomes_project 18 82303573 82325133 + MGP_BALBcJ_P0050185 Fam69c protein_coding protein_coding MGP_BALBcJ_T0050186.1 MGP_BALBcJ_G0024574.1 mouse_genomes_project 18 82303608 82324101 + Fam69c protein_coding processed_transcript MGP_BALBcJ_T0050187.1 MGP_BALBcJ_G0024574.1 mouse_genomes_project 18 82304214 82313318 + Fam69c protein_coding processed_transcript MGP_BALBcJ_T0049815.1 MGP_BALBcJ_G0024466.1 mouse_genomes_project 18 61121020 61398616 + MGP_BALBcJ_P0049815 Wdr7 protein_coding protein_coding MGP_BALBcJ_T0049022.1 MGP_BALBcJ_G0024147.1 mouse_genomes_project 18 17821196 17884977 - MGP_BALBcJ_P0049022 B4galt6 protein_coding protein_coding MGP_BALBcJ_T0049140.1 MGP_BALBcJ_G0024199.1 mouse_genomes_project 18 30603723 30630571 - MGP_BALBcJ_P0049140 Nrep protein_coding protein_coding MGP_BALBcJ_T0049141.1 MGP_BALBcJ_G0024199.1 mouse_genomes_project 18 30603723 30630969 - MGP_BALBcJ_P0049141 Nrep protein_coding protein_coding MGP_BALBcJ_T0049142.1 MGP_BALBcJ_G0024199.1 mouse_genomes_project 18 30603723 30630687 - MGP_BALBcJ_P0049142 Nrep protein_coding protein_coding MGP_BALBcJ_T0049794.1 MGP_BALBcJ_G0024462.1 mouse_genomes_project 18 60335502 60366121 + MGP_BALBcJ_P0049794 Apcdd1 protein_coding protein_coding MGP_BALBcJ_T0049795.1 MGP_BALBcJ_G0024462.1 mouse_genomes_project 18 60335504 60365390 + MGP_BALBcJ_P0049795 Apcdd1 protein_coding protein_coding MGP_BALBcJ_T0098553.1 MGP_BALBcJ_G0036607.1 mouse_genomes_project 18 55592215 55592319 - Gm25660 rRNA rRNA MGP_BALBcJ_T0099593.1 MGP_BALBcJ_G0037629.1 mouse_genomes_project 18 640197 640261 - Gm23643 snRNA snRNA MGP_BALBcJ_T0050109.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745437 77750165 + Gm16286 protein_coding processed_transcript MGP_BALBcJ_T0050111.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745470 77751397 + MGP_BALBcJ_P0050111 Gm16286 protein_coding protein_coding MGP_BALBcJ_T0050112.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745502 77749439 + Gm16286 protein_coding retained_intron MGP_BALBcJ_T0050113.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745518 77746451 + Gm16286 protein_coding retained_intron MGP_BALBcJ_T0050115.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745539 77751388 + MGP_BALBcJ_P0050115 Gm16286 protein_coding protein_coding MGP_BALBcJ_T0050117.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745567 77751406 + MGP_BALBcJ_P0050117 Gm16286 protein_coding protein_coding MGP_BALBcJ_T0050118.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745585 77746359 + Gm16286 protein_coding retained_intron MGP_BALBcJ_T0050119.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745590 77746451 + Gm16286 protein_coding retained_intron MGP_BALBcJ_T0050120.1 MGP_BALBcJ_G0024556.1 mouse_genomes_project 18 77745932 77750159 + Gm16286 protein_coding processed_transcript MGP_BALBcJ_T0017596.1 MGP_BALBcJ_G0015304.1 mouse_genomes_project 18 54724043 54906241 - 4930511M06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017599.1 MGP_BALBcJ_G0015304.1 mouse_genomes_project 18 54859467 54905079 - 4930511M06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017603.1 MGP_BALBcJ_G0015304.1 mouse_genomes_project 18 54898479 54905182 - 4930511M06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017604.1 MGP_BALBcJ_G0015304.1 mouse_genomes_project 18 54899133 54906435 - 4930511M06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017605.1 MGP_BALBcJ_G0015304.1 mouse_genomes_project 18 54901064 54906437 - 4930511M06Rik processed_transcript processed_transcript MGP_BALBcJ_T0048931.1 MGP_BALBcJ_G0024110.1 mouse_genomes_project 18 7493390 7503793 + MGP_BALBcJ_P0048931 Snrpd1 protein_coding protein_coding MGP_BALBcJ_T0010225.1 MGP_BALBcJ_G0008350.1 mouse_genomes_project 18 34034759 34034869 + Gm23424 miRNA miRNA MGP_BALBcJ_T0011434.1 MGP_BALBcJ_G0009559.1 mouse_genomes_project 18 35847483 35847602 + Gm27804 misc_RNA misc_RNA MGP_BALBcJ_T0048821.1 MGP_BALBcJ_G0024083.1 mouse_genomes_project 18 1033073 1049504 + MGP_BALBcJ_P0048821 Lyzl1 protein_coding protein_coding MGP_BALBcJ_T0048822.1 MGP_BALBcJ_G0024083.1 mouse_genomes_project 18 1033103 1049504 + MGP_BALBcJ_P0048822 Lyzl1 protein_coding protein_coding MGP_BALBcJ_T0003806.1 MGP_BALBcJ_G0003420.1 mouse_genomes_project 18 42959228 43166073 - antisense antisense MGP_BALBcJ_T0003807.1 MGP_BALBcJ_G0003420.1 mouse_genomes_project 18 42960871 43130711 - antisense antisense MGP_BALBcJ_T0001001.1 MGP_BALBcJ_G0000929.1 mouse_genomes_project 18 52465358 52465570 + TEC TEC MGP_BALBcJ_T0100870.1 MGP_BALBcJ_G0038906.1 mouse_genomes_project 18 32741908 32742049 + Mir1949 snoRNA snoRNA MGP_BALBcJ_T0013339.1 MGP_BALBcJ_G0011436.1 mouse_genomes_project 18 74775136 74776110 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013287.1 MGP_BALBcJ_G0011384.1 mouse_genomes_project 18 6771341 6772157 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049690.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408462 56423998 + MGP_BALBcJ_P0049690 A730017C20Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049691.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408496 56423998 + MGP_BALBcJ_P0049691 A730017C20Rik protein_coding protein_coding MGP_BALBcJ_T0049692.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408676 56423998 + MGP_BALBcJ_P0049692 A730017C20Rik protein_coding protein_coding MGP_BALBcJ_T0049693.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408680 56422657 + MGP_BALBcJ_P0049693 A730017C20Rik protein_coding protein_coding MGP_BALBcJ_T0049694.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408708 56422860 + MGP_BALBcJ_P0049694 A730017C20Rik protein_coding protein_coding MGP_BALBcJ_T0049695.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408724 56421700 + A730017C20Rik protein_coding retained_intron MGP_BALBcJ_T0049696.1 MGP_BALBcJ_G0024422.1 mouse_genomes_project 18 56408725 56422967 + MGP_BALBcJ_P0049696 A730017C20Rik protein_coding protein_coding MGP_BALBcJ_T0049761.1 MGP_BALBcJ_G0024446.1 mouse_genomes_project 18 58873660 58917438 - MGP_BALBcJ_P0049761 Arhgef37 protein_coding protein_coding MGP_BALBcJ_T0049329.1 MGP_BALBcJ_G0024259.1 mouse_genomes_project 18 34017928 34023657 + MGP_BALBcJ_P0049329 Zmat2 protein_coding protein_coding MGP_BALBcJ_T0049789.1 MGP_BALBcJ_G0024460.1 mouse_genomes_project 18 60034492 60046936 + Spink10 protein_coding processed_transcript MGP_BALBcJ_T0049790.1 MGP_BALBcJ_G0024460.1 mouse_genomes_project 18 60038405 60049081 + MGP_BALBcJ_P0049790 Spink10 protein_coding protein_coding MGP_BALBcJ_T0049791.1 MGP_BALBcJ_G0024460.1 mouse_genomes_project 18 60038687 60040587 + Spink10 protein_coding processed_transcript MGP_BALBcJ_T0049792.1 MGP_BALBcJ_G0024460.1 mouse_genomes_project 18 60038741 60041675 + Spink10 protein_coding processed_transcript MGP_BALBcJ_T0007021.1 MGP_BALBcJ_G0005767.1 mouse_genomes_project 18 71543356 71545566 + D730045A05Rik lincRNA lincRNA MGP_BALBcJ_T0049526.1 MGP_BALBcJ_G0024352.1 mouse_genomes_project 18 40634340 40750762 - MGP_BALBcJ_P0049526 Dpysl3 protein_coding protein_coding MGP_BALBcJ_T0049527.1 MGP_BALBcJ_G0024352.1 mouse_genomes_project 18 40636083 40637393 - Dpysl3 protein_coding processed_transcript MGP_BALBcJ_T0049528.1 MGP_BALBcJ_G0024352.1 mouse_genomes_project 18 40637589 40685092 - MGP_BALBcJ_P0049528 Dpysl3 protein_coding protein_coding MGP_BALBcJ_T0049529.1 MGP_BALBcJ_G0024352.1 mouse_genomes_project 18 40637650 40705573 - MGP_BALBcJ_P0049529 Dpysl3 protein_coding protein_coding MGP_BALBcJ_T0049530.1 MGP_BALBcJ_G0024352.1 mouse_genomes_project 18 40643525 40658762 - MGP_BALBcJ_P0049530 Dpysl3 protein_coding protein_coding MGP_BALBcJ_T0049531.1 MGP_BALBcJ_G0024352.1 mouse_genomes_project 18 40647966 40658357 - MGP_BALBcJ_P0049531 Dpysl3 protein_coding protein_coding MGP_BALBcJ_T0050179.1 MGP_BALBcJ_G0024572.1 mouse_genomes_project 18 82194896 82234856 - MGP_BALBcJ_P0050179 Cndp1 protein_coding protein_coding MGP_BALBcJ_T0050180.1 MGP_BALBcJ_G0024572.1 mouse_genomes_project 18 82213088 82234818 - Cndp1 protein_coding retained_intron MGP_BALBcJ_T0050181.1 MGP_BALBcJ_G0024572.1 mouse_genomes_project 18 82215254 82234718 - Cndp1 protein_coding retained_intron MGP_BALBcJ_T0007027.1 MGP_BALBcJ_G0005773.1 mouse_genomes_project 18 80439501 80454371 + 4930445N18Rik lincRNA lincRNA MGP_BALBcJ_T0007028.1 MGP_BALBcJ_G0005773.1 mouse_genomes_project 18 80439504 80442770 + 4930445N18Rik lincRNA lincRNA MGP_BALBcJ_T0049118.1 MGP_BALBcJ_G0024186.1 mouse_genomes_project 18 29152142 29179269 + MGP_BALBcJ_P0049118 Lims2 protein_coding protein_coding MGP_BALBcJ_T0049120.1 MGP_BALBcJ_G0024186.1 mouse_genomes_project 18 29174741 29178640 + MGP_BALBcJ_P0049120 Lims2 protein_coding unknown_likely_coding MGP_BALBcJ_T0049731.1 MGP_BALBcJ_G0024435.1 mouse_genomes_project 18 58178512 58187977 + MGP_BALBcJ_P0049731 Cd74 protein_coding protein_coding MGP_BALBcJ_T0049732.1 MGP_BALBcJ_G0024435.1 mouse_genomes_project 18 58178512 58187977 + MGP_BALBcJ_P0049732 Cd74 protein_coding protein_coding MGP_BALBcJ_T0049733.1 MGP_BALBcJ_G0024435.1 mouse_genomes_project 18 58178520 58187977 + MGP_BALBcJ_P0049733 Cd74 protein_coding protein_coding MGP_BALBcJ_T0099603.1 MGP_BALBcJ_G0037639.1 mouse_genomes_project 18 31181992 31182053 - Gm22788 snRNA snRNA MGP_BALBcJ_T0048906.1 MGP_BALBcJ_G0024101.1 mouse_genomes_project 18 6168809 6312999 - MGP_BALBcJ_P0048906 Ccny protein_coding protein_coding MGP_BALBcJ_T0013336.1 MGP_BALBcJ_G0011433.1 mouse_genomes_project 18 61868189 61869626 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049342.1 MGP_BALBcJ_G0024267.1 mouse_genomes_project 18 34193978 35068811 + MGP_BALBcJ_P0049342 Gm37013 protein_coding protein_coding MGP_BALBcJ_T0048940.1 MGP_BALBcJ_G0024114.1 mouse_genomes_project 18 8577526 8685377 + MGP_BALBcJ_P0048940 Rbbp8 protein_coding protein_coding MGP_BALBcJ_T0048941.1 MGP_BALBcJ_G0024114.1 mouse_genomes_project 18 8597163 8685377 + MGP_BALBcJ_P0048941 Rbbp8 protein_coding protein_coding MGP_BALBcJ_T0001008.1 MGP_BALBcJ_G0000936.1 mouse_genomes_project 18 81955765 81959243 - TEC TEC MGP_BALBcJ_T0017597.1 MGP_BALBcJ_G0015305.1 mouse_genomes_project 18 54857937 54886874 - 1700066O22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017598.1 MGP_BALBcJ_G0015305.1 mouse_genomes_project 18 54859441 54886850 - 1700066O22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017600.1 MGP_BALBcJ_G0015305.1 mouse_genomes_project 18 54869193 54886861 - 1700066O22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017601.1 MGP_BALBcJ_G0015305.1 mouse_genomes_project 18 54869204 54886838 - 1700066O22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017602.1 MGP_BALBcJ_G0015305.1 mouse_genomes_project 18 54883553 54886845 - 1700066O22Rik processed_transcript processed_transcript MGP_BALBcJ_T0006994.1 MGP_BALBcJ_G0005748.1 mouse_genomes_project 18 30952333 30953431 + Epb41l4aos lincRNA lincRNA MGP_BALBcJ_T0006995.1 MGP_BALBcJ_G0005748.1 mouse_genomes_project 18 30952380 30953410 + Epb41l4aos lincRNA lincRNA MGP_BALBcJ_T0049584.1 MGP_BALBcJ_G0024380.1 mouse_genomes_project 18 44022756 44066376 + MGP_BALBcJ_P0049584 Ap3s1 protein_coding unknown_likely_coding MGP_BALBcJ_T0098349.1 MGP_BALBcJ_G0036403.1 mouse_genomes_project 18 86887916 86891644 - pseudogene pseudogene MGP_BALBcJ_T0013306.1 MGP_BALBcJ_G0011403.1 mouse_genomes_project 18 29252284 29252442 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048956.1 MGP_BALBcJ_G0024119.1 mouse_genomes_project 18 9139261 9186111 - MGP_BALBcJ_P0048956 Npc1 protein_coding protein_coding MGP_BALBcJ_T0048957.1 MGP_BALBcJ_G0024119.1 mouse_genomes_project 18 9159943 9162114 - Npc1 protein_coding processed_transcript MGP_BALBcJ_T0048958.1 MGP_BALBcJ_G0024119.1 mouse_genomes_project 18 9167130 9186069 - Npc1 protein_coding retained_intron MGP_BALBcJ_T0048959.1 MGP_BALBcJ_G0024119.1 mouse_genomes_project 18 9167551 9186037 - Npc1 protein_coding retained_intron MGP_BALBcJ_T0048960.1 MGP_BALBcJ_G0024119.1 mouse_genomes_project 18 9171401 9173657 - Npc1 protein_coding processed_transcript MGP_BALBcJ_T0001003.1 MGP_BALBcJ_G0000931.1 mouse_genomes_project 18 52821746 52822735 - TEC TEC MGP_BALBcJ_T0010247.1 MGP_BALBcJ_G0008372.1 mouse_genomes_project 18 63669049 63669119 - Mir694 miRNA miRNA MGP_BALBcJ_T0049777.1 MGP_BALBcJ_G0024451.1 mouse_genomes_project 18 59115311 59171417 - MGP_BALBcJ_P0049777 Afap1l1 protein_coding protein_coding MGP_BALBcJ_T0049778.1 MGP_BALBcJ_G0024451.1 mouse_genomes_project 18 59115311 59171326 - MGP_BALBcJ_P0049778 Afap1l1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049779.1 MGP_BALBcJ_G0024451.1 mouse_genomes_project 18 59115989 59171375 - Afap1l1 protein_coding retained_intron MGP_BALBcJ_T0049776.1 MGP_BALBcJ_G0024450.1 mouse_genomes_project 18 59095941 59111390 - MGP_BALBcJ_P0049776 Grpel2 protein_coding protein_coding MGP_BALBcJ_T0100868.1 MGP_BALBcJ_G0038904.1 mouse_genomes_project 18 32116660 32116727 - Gm22200 snoRNA snoRNA MGP_BALBcJ_T0049559.1 MGP_BALBcJ_G0024369.1 mouse_genomes_project 18 42124818 42192132 + MGP_BALBcJ_P0049559 Ythdc2 protein_coding protein_coding MGP_BALBcJ_T0049560.1 MGP_BALBcJ_G0024369.1 mouse_genomes_project 18 42148595 42149926 + Ythdc2 protein_coding retained_intron MGP_BALBcJ_T0049561.1 MGP_BALBcJ_G0024369.1 mouse_genomes_project 18 42156336 42192139 + MGP_BALBcJ_P0049561 Ythdc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049562.1 MGP_BALBcJ_G0024369.1 mouse_genomes_project 18 42156526 42159617 + Ythdc2 protein_coding retained_intron MGP_BALBcJ_T0098547.1 MGP_BALBcJ_G0036601.1 mouse_genomes_project 18 9533468 9533582 - Gm22340 rRNA rRNA MGP_BALBcJ_T0049821.1 MGP_BALBcJ_G0024468.1 mouse_genomes_project 18 61758005 61817036 + MGP_BALBcJ_P0049821 Onecut2 protein_coding protein_coding MGP_BALBcJ_T0049822.1 MGP_BALBcJ_G0024468.1 mouse_genomes_project 18 61758005 61817038 + MGP_BALBcJ_P0049822 Onecut2 protein_coding protein_coding MGP_BALBcJ_T0049260.1 MGP_BALBcJ_G0024237.1 mouse_genomes_project 18 32973093 33016617 + MGP_BALBcJ_P0049260 Ube2d2a protein_coding protein_coding MGP_BALBcJ_T0049261.1 MGP_BALBcJ_G0024237.1 mouse_genomes_project 18 32973136 33016608 + MGP_BALBcJ_P0049261 Ube2d2a protein_coding protein_coding MGP_BALBcJ_T0049534.1 MGP_BALBcJ_G0024355.1 mouse_genomes_project 18 41075752 41078864 + MGP_BALBcJ_P0049534 Scgb3a2 protein_coding protein_coding MGP_BALBcJ_T0049535.1 MGP_BALBcJ_G0024355.1 mouse_genomes_project 18 41075790 41078864 + MGP_BALBcJ_P0049535 Scgb3a2 protein_coding protein_coding MGP_BALBcJ_T0049536.1 MGP_BALBcJ_G0024355.1 mouse_genomes_project 18 41075790 41078864 + MGP_BALBcJ_P0049536 Scgb3a2 protein_coding protein_coding MGP_BALBcJ_T0049473.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36110190 36181691 - MGP_BALBcJ_P0049473 Fgf1 protein_coding protein_coding MGP_BALBcJ_T0049474.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36110192 36192247 - MGP_BALBcJ_P0049474 Fgf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049475.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36111694 36137670 - MGP_BALBcJ_P0049475 Fgf1 protein_coding protein_coding MGP_BALBcJ_T0049476.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36113422 36129671 - MGP_BALBcJ_P0049476 Fgf1 protein_coding protein_coding MGP_BALBcJ_T0049477.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36118238 36137055 - MGP_BALBcJ_P0049477 Fgf1 protein_coding protein_coding MGP_BALBcJ_T0049478.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36118279 36129784 - Fgf1 protein_coding retained_intron MGP_BALBcJ_T0049479.1 MGP_BALBcJ_G0024334.1 mouse_genomes_project 18 36129490 36191998 - MGP_BALBcJ_P0049479 Fgf1 protein_coding protein_coding MGP_BALBcJ_T0050147.1 MGP_BALBcJ_G0024565.1 mouse_genomes_project 18 79962209 79976489 - MGP_BALBcJ_P0050147 Galr1 protein_coding protein_coding MGP_BALBcJ_T0099625.1 MGP_BALBcJ_G0037661.1 mouse_genomes_project 18 78566120 78566249 + Gm25718 snRNA snRNA MGP_BALBcJ_T0049462.1 MGP_BALBcJ_G0024330.1 mouse_genomes_project 18 35574249 35577637 - protein_coding processed_transcript MGP_BALBcJ_T0049463.1 MGP_BALBcJ_G0024330.1 mouse_genomes_project 18 35574439 35584511 - MGP_BALBcJ_P0049463 protein_coding unknown_likely_coding MGP_BALBcJ_T0049464.1 MGP_BALBcJ_G0024330.1 mouse_genomes_project 18 35578663 35580645 - protein_coding retained_intron MGP_BALBcJ_T0049465.1 MGP_BALBcJ_G0024330.1 mouse_genomes_project 18 35578755 35584476 - MGP_BALBcJ_P0049465 protein_coding protein_coding MGP_BALBcJ_T0049311.1 MGP_BALBcJ_G0024250.1 mouse_genomes_project 18 33909043 33919987 - MGP_BALBcJ_P0049311 E230025N22Rik protein_coding protein_coding MGP_BALBcJ_T0049450.1 MGP_BALBcJ_G0024325.1 mouse_genomes_project 18 35208678 35233624 - MGP_BALBcJ_P0049450 Arap3 protein_coding protein_coding MGP_BALBcJ_T0050148.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80046343 80132958 + MGP_BALBcJ_P0050148 Mbp protein_coding protein_coding MGP_BALBcJ_T0050149.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80046345 80086036 + MGP_BALBcJ_P0050149 Mbp protein_coding protein_coding MGP_BALBcJ_T0050150.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80046359 80159892 + MGP_BALBcJ_P0050150 Mbp protein_coding protein_coding MGP_BALBcJ_T0050151.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80046436 80158411 + MGP_BALBcJ_P0050151 Mbp protein_coding protein_coding MGP_BALBcJ_T0050152.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80046567 80158472 + MGP_BALBcJ_P0050152 Mbp protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050153.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128717 80159892 + MGP_BALBcJ_P0050153 Mbp protein_coding protein_coding MGP_BALBcJ_T0050154.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128717 80159892 + MGP_BALBcJ_P0050154 Mbp protein_coding protein_coding MGP_BALBcJ_T0050155.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128724 80159882 + MGP_BALBcJ_P0050155 Mbp protein_coding protein_coding MGP_BALBcJ_T0050156.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128762 80159892 + MGP_BALBcJ_P0050156 Mbp protein_coding protein_coding MGP_BALBcJ_T0050157.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128784 80158411 + MGP_BALBcJ_P0050157 Mbp protein_coding protein_coding MGP_BALBcJ_T0050158.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128800 80159892 + MGP_BALBcJ_P0050158 Mbp protein_coding protein_coding MGP_BALBcJ_T0050159.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80128837 80159881 + MGP_BALBcJ_P0050159 Mbp protein_coding protein_coding MGP_BALBcJ_T0050160.1 MGP_BALBcJ_G0024566.1 mouse_genomes_project 18 80137516 80158542 + Mbp protein_coding processed_transcript MGP_BALBcJ_T0050108.1 MGP_BALBcJ_G0024555.1 mouse_genomes_project 18 77730779 77739190 - MGP_BALBcJ_P0050108 Rbfa protein_coding protein_coding MGP_BALBcJ_T0049875.1 MGP_BALBcJ_G0024488.1 mouse_genomes_project 18 64839033 64864898 + MGP_BALBcJ_P0049875 Cidea protein_coding protein_coding MGP_BALBcJ_T0003795.1 MGP_BALBcJ_G0003410.1 mouse_genomes_project 18 34653025 34657161 - Gm37446 antisense antisense MGP_BALBcJ_T0100865.1 MGP_BALBcJ_G0038901.1 mouse_genomes_project 18 29842663 29842800 - Gm25826 snoRNA snoRNA MGP_BALBcJ_T0049086.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379714 22677897 + MGP_BALBcJ_P0049086 AW554918 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049087.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379725 22681488 + MGP_BALBcJ_P0049087 AW554918 protein_coding protein_coding MGP_BALBcJ_T0049088.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379729 22400309 + AW554918 protein_coding processed_transcript MGP_BALBcJ_T0049089.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379735 22506164 + AW554918 protein_coding processed_transcript MGP_BALBcJ_T0049090.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379735 22681493 + MGP_BALBcJ_P0049090 AW554918 protein_coding protein_coding MGP_BALBcJ_T0049091.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379735 22681493 + MGP_BALBcJ_P0049091 AW554918 protein_coding protein_coding MGP_BALBcJ_T0049092.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22379738 22678068 + MGP_BALBcJ_P0049092 AW554918 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049093.1 MGP_BALBcJ_G0024173.1 mouse_genomes_project 18 22452912 22678264 + MGP_BALBcJ_P0049093 AW554918 protein_coding protein_coding MGP_BALBcJ_T0049543.1 MGP_BALBcJ_G0024361.1 mouse_genomes_project 18 41462522 41466338 - MGP_BALBcJ_P0049543 Gm10267 protein_coding protein_coding MGP_BALBcJ_T0049544.1 MGP_BALBcJ_G0024361.1 mouse_genomes_project 18 41462531 41465780 - MGP_BALBcJ_P0049544 Gm10267 protein_coding protein_coding MGP_BALBcJ_T0048907.1 MGP_BALBcJ_G0024102.1 mouse_genomes_project 18 6477538 6481715 - MGP_BALBcJ_P0048907 Cetn1 protein_coding protein_coding MGP_BALBcJ_T0003797.1 MGP_BALBcJ_G0003412.1 mouse_genomes_project 18 34948674 34960438 - Gm37165 antisense antisense MGP_BALBcJ_T0101660.1 MGP_BALBcJ_G0039656.1 mouse_genomes_project 18 72857850 72867274 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101661.1 MGP_BALBcJ_G0039656.1 mouse_genomes_project 18 72858121 72858379 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101662.1 MGP_BALBcJ_G0039656.1 mouse_genomes_project 18 72865629 72867286 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0010252.1 MGP_BALBcJ_G0008377.1 mouse_genomes_project 18 72468246 72468328 - Gm25594 miRNA miRNA MGP_BALBcJ_T0049312.1 MGP_BALBcJ_G0024251.1 mouse_genomes_project 18 33948573 33950240 - MGP_BALBcJ_P0049312 Cd14 protein_coding protein_coding MGP_BALBcJ_T0010213.1 MGP_BALBcJ_G0008338.1 mouse_genomes_project 18 6690322 6690412 - Gm23637 miRNA miRNA MGP_BALBcJ_T0049113.1 MGP_BALBcJ_G0024182.1 mouse_genomes_project 18 29008726 29016210 + MGP_BALBcJ_P0049113 Polr2d protein_coding protein_coding MGP_BALBcJ_T0050140.1 MGP_BALBcJ_G0024562.1 mouse_genomes_project 18 78147522 78249737 - MGP_BALBcJ_P0050140 Nfatc1 protein_coding protein_coding MGP_BALBcJ_T0050141.1 MGP_BALBcJ_G0024562.1 mouse_genomes_project 18 78147522 78254648 - MGP_BALBcJ_P0050141 Nfatc1 protein_coding protein_coding MGP_BALBcJ_T0050142.1 MGP_BALBcJ_G0024562.1 mouse_genomes_project 18 78147522 78254648 - MGP_BALBcJ_P0050142 Nfatc1 protein_coding protein_coding MGP_BALBcJ_T0050143.1 MGP_BALBcJ_G0024562.1 mouse_genomes_project 18 78188771 78249737 - MGP_BALBcJ_P0050143 Nfatc1 protein_coding protein_coding MGP_BALBcJ_T0049001.1 MGP_BALBcJ_G0024134.1 mouse_genomes_project 18 12450064 12697640 - MGP_BALBcJ_P0049001 Chst9 protein_coding protein_coding MGP_BALBcJ_T0049002.1 MGP_BALBcJ_G0024134.1 mouse_genomes_project 18 12450064 12740713 - MGP_BALBcJ_P0049002 Chst9 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010233.1 MGP_BALBcJ_G0008358.1 mouse_genomes_project 18 53573544 53573729 + Gm25476 miRNA miRNA MGP_BALBcJ_T0100874.1 MGP_BALBcJ_G0038910.1 mouse_genomes_project 18 44273658 44273803 - Gm22791 snoRNA snoRNA MGP_BALBcJ_T0011430.1 MGP_BALBcJ_G0009555.1 mouse_genomes_project 18 22812522 22812832 - Gm25845 misc_RNA misc_RNA MGP_BALBcJ_T0098557.1 MGP_BALBcJ_G0036611.1 mouse_genomes_project 18 71064174 71064322 - n-R5-8s1 rRNA rRNA MGP_BALBcJ_T0049026.1 MGP_BALBcJ_G0024149.1 mouse_genomes_project 18 18146353 18167531 + MGP_BALBcJ_P0049026 Rnf125 protein_coding protein_coding MGP_BALBcJ_T0048990.1 MGP_BALBcJ_G0024127.1 mouse_genomes_project 18 10647114 10934069 - MGP_BALBcJ_P0048990 Zfp521 protein_coding protein_coding MGP_BALBcJ_T0100855.1 MGP_BALBcJ_G0038891.1 mouse_genomes_project 18 6476328 6476456 + Gm22765 snoRNA snoRNA MGP_BALBcJ_T0049392.1 MGP_BALBcJ_G0024306.1 mouse_genomes_project 18 34928861 35077409 + MGP_BALBcJ_P0049392 Pcdhga5 protein_coding protein_coding MGP_BALBcJ_T0010223.1 MGP_BALBcJ_G0008348.1 mouse_genomes_project 18 32744548 32744659 + miRNA miRNA MGP_BALBcJ_T0049107.1 MGP_BALBcJ_G0024178.1 mouse_genomes_project 18 28798505 28828199 - MGP_BALBcJ_P0049107 Slc25a46 protein_coding protein_coding MGP_BALBcJ_T0049029.1 MGP_BALBcJ_G0024151.1 mouse_genomes_project 18 18260476 18288175 + MGP_BALBcJ_P0049029 Mep1b protein_coding protein_coding MGP_BALBcJ_T0013299.1 MGP_BALBcJ_G0011396.1 mouse_genomes_project 18 18264799 18265243 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049503.1 MGP_BALBcJ_G0024339.1 mouse_genomes_project 18 37526963 37815767 + MGP_BALBcJ_P0049503 Kctd16 protein_coding protein_coding MGP_BALBcJ_T0017566.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2355479 2451135 - Gm10125 processed_transcript antisense MGP_BALBcJ_T0017567.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2380031 2382720 - Gm10125 processed_transcript retained_intron MGP_BALBcJ_T0017568.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2386932 2451135 - Gm10125 processed_transcript processed_transcript MGP_BALBcJ_T0017569.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2387004 2450933 - Gm10125 processed_transcript antisense MGP_BALBcJ_T0017570.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2429689 2452252 - Gm10125 processed_transcript antisense MGP_BALBcJ_T0017571.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2429689 2451124 - Gm10125 processed_transcript antisense MGP_BALBcJ_T0017572.1 MGP_BALBcJ_G0015296.1 mouse_genomes_project 18 2439017 2450932 - Gm10125 processed_transcript antisense MGP_BALBcJ_T0049539.1 MGP_BALBcJ_G0024358.1 mouse_genomes_project 18 41336353 41340695 + MGP_BALBcJ_P0049539 Spink14 protein_coding protein_coding MGP_BALBcJ_T0049540.1 MGP_BALBcJ_G0024358.1 mouse_genomes_project 18 41337178 41340695 + MGP_BALBcJ_P0049540 Spink14 protein_coding protein_coding MGP_BALBcJ_T0010238.1 MGP_BALBcJ_G0008363.1 mouse_genomes_project 18 58187406 58187494 + Mir5107 miRNA miRNA MGP_BALBcJ_T0050074.1 MGP_BALBcJ_G0024539.1 mouse_genomes_project 18 74740481 74741733 - MGP_BALBcJ_P0050074 Gm7276 protein_coding protein_coding MGP_BALBcJ_T0049263.1 MGP_BALBcJ_G0024239.1 mouse_genomes_project 18 33178213 33228315 + MGP_BALBcJ_P0049263 Psd2 protein_coding protein_coding MGP_BALBcJ_T0049264.1 MGP_BALBcJ_G0024239.1 mouse_genomes_project 18 33178448 33228315 + MGP_BALBcJ_P0049264 Psd2 protein_coding protein_coding MGP_BALBcJ_T0049265.1 MGP_BALBcJ_G0024239.1 mouse_genomes_project 18 33178450 33228318 + MGP_BALBcJ_P0049265 Psd2 protein_coding protein_coding MGP_BALBcJ_T0049266.1 MGP_BALBcJ_G0024239.1 mouse_genomes_project 18 33178485 33228183 + MGP_BALBcJ_P0049266 Psd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049267.1 MGP_BALBcJ_G0024239.1 mouse_genomes_project 18 33178488 33228277 + MGP_BALBcJ_P0049267 Psd2 protein_coding protein_coding MGP_BALBcJ_T0049268.1 MGP_BALBcJ_G0024239.1 mouse_genomes_project 18 33200337 33218998 + Psd2 protein_coding retained_intron MGP_BALBcJ_T0099598.1 MGP_BALBcJ_G0037634.1 mouse_genomes_project 18 17989202 17989348 - Gm24959 snRNA snRNA MGP_BALBcJ_T0049467.1 MGP_BALBcJ_G0024332.1 mouse_genomes_project 18 35839386 35854376 - MGP_BALBcJ_P0049467 Spry4 protein_coding protein_coding MGP_BALBcJ_T0100873.1 MGP_BALBcJ_G0038909.1 mouse_genomes_project 18 43208732 43208859 + Gm26262 snoRNA snoRNA MGP_BALBcJ_T0011442.1 MGP_BALBcJ_G0009567.1 mouse_genomes_project 18 62858476 62859155 + Gm22567 misc_RNA misc_RNA MGP_BALBcJ_T0099622.1 MGP_BALBcJ_G0037658.1 mouse_genomes_project 18 63341776 63341836 - Gm25150 snRNA snRNA MGP_BALBcJ_T0007023.1 MGP_BALBcJ_G0005769.1 mouse_genomes_project 18 73359243 73361800 + lincRNA lincRNA MGP_BALBcJ_T0048996.1 MGP_BALBcJ_G0024131.1 mouse_genomes_project 18 11763690 11884980 + MGP_BALBcJ_P0048996 Taf4b protein_coding protein_coding MGP_BALBcJ_T0048997.1 MGP_BALBcJ_G0024131.1 mouse_genomes_project 18 11764112 11882749 + MGP_BALBcJ_P0048997 Taf4b protein_coding unknown_likely_coding MGP_BALBcJ_T0049541.1 MGP_BALBcJ_G0024359.1 mouse_genomes_project 18 41376883 41388966 + MGP_BALBcJ_P0049541 Spink6 protein_coding protein_coding MGP_BALBcJ_T0010239.1 MGP_BALBcJ_G0008364.1 mouse_genomes_project 18 58322809 58322869 + Mir7220 miRNA miRNA MGP_BALBcJ_T0049388.1 MGP_BALBcJ_G0024304.1 mouse_genomes_project 18 34918744 35077409 + MGP_BALBcJ_P0049388 Pcdhga4 protein_coding protein_coding MGP_BALBcJ_T0049389.1 MGP_BALBcJ_G0024304.1 mouse_genomes_project 18 34920418 34921314 + MGP_BALBcJ_P0049389 Pcdhga4 protein_coding protein_coding MGP_BALBcJ_T0000995.1 MGP_BALBcJ_G0000923.1 mouse_genomes_project 18 2446224 2449888 - TEC TEC MGP_BALBcJ_T0003813.1 MGP_BALBcJ_G0003424.1 mouse_genomes_project 18 61562624 61691228 - St8sia3os antisense antisense MGP_BALBcJ_T0003814.1 MGP_BALBcJ_G0003424.1 mouse_genomes_project 18 61607270 61691228 - St8sia3os antisense antisense MGP_BALBcJ_T0003815.1 MGP_BALBcJ_G0003424.1 mouse_genomes_project 18 61682800 61691219 - St8sia3os antisense antisense MGP_BALBcJ_T0003816.1 MGP_BALBcJ_G0003424.1 mouse_genomes_project 18 61689522 61691205 - St8sia3os antisense antisense MGP_BALBcJ_T0049109.1 MGP_BALBcJ_G0024180.1 mouse_genomes_project 18 28852671 28941918 + MGP_BALBcJ_P0049109 Sap130 protein_coding protein_coding MGP_BALBcJ_T0049110.1 MGP_BALBcJ_G0024180.1 mouse_genomes_project 18 28852683 28941918 + MGP_BALBcJ_P0049110 Sap130 protein_coding protein_coding MGP_BALBcJ_T0049111.1 MGP_BALBcJ_G0024180.1 mouse_genomes_project 18 28853363 28941921 + MGP_BALBcJ_P0049111 Sap130 protein_coding unknown_likely_coding MGP_BALBcJ_T0013310.1 MGP_BALBcJ_G0011407.1 mouse_genomes_project 18 34521898 34523163 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049335.1 MGP_BALBcJ_G0024263.1 mouse_genomes_project 18 34176740 34406362 + MGP_BALBcJ_P0049335 Pcdha4 protein_coding protein_coding MGP_BALBcJ_T0049336.1 MGP_BALBcJ_G0024263.1 mouse_genomes_project 18 34176750 34179644 + Pcdha4 protein_coding retained_intron MGP_BALBcJ_T0049337.1 MGP_BALBcJ_G0024263.1 mouse_genomes_project 18 34176767 34406366 + MGP_BALBcJ_P0049337 Pcdha4 protein_coding protein_coding MGP_BALBcJ_T0049677.1 MGP_BALBcJ_G0024413.1 mouse_genomes_project 18 54485592 54645497 + MGP_BALBcJ_P0049677 Megf10 protein_coding protein_coding MGP_BALBcJ_T0049678.1 MGP_BALBcJ_G0024413.1 mouse_genomes_project 18 54495647 54640753 + MGP_BALBcJ_P0049678 Megf10 protein_coding protein_coding MGP_BALBcJ_T0050134.1 MGP_BALBcJ_G0024560.1 mouse_genomes_project 18 77836415 77907520 - MGP_BALBcJ_P0050134 Kcng2 protein_coding protein_coding MGP_BALBcJ_T0050135.1 MGP_BALBcJ_G0024560.1 mouse_genomes_project 18 77864720 77906602 - MGP_BALBcJ_P0050135 Kcng2 protein_coding protein_coding MGP_BALBcJ_T0050136.1 MGP_BALBcJ_G0024560.1 mouse_genomes_project 18 77864985 77906916 - MGP_BALBcJ_P0050136 Kcng2 protein_coding protein_coding MGP_BALBcJ_T0049361.1 MGP_BALBcJ_G0024281.1 mouse_genomes_project 18 34549807 34552148 + MGP_BALBcJ_P0049361 Pcdhb6 protein_coding protein_coding MGP_BALBcJ_T0049362.1 MGP_BALBcJ_G0024281.1 mouse_genomes_project 18 34549832 34553556 + MGP_BALBcJ_P0049362 Pcdhb6 protein_coding protein_coding MGP_BALBcJ_T0049583.1 MGP_BALBcJ_G0024379.1 mouse_genomes_project 18 44013183 44022323 - MGP_BALBcJ_P0049583 Atg12 protein_coding protein_coding MGP_BALBcJ_T0099608.1 MGP_BALBcJ_G0037644.1 mouse_genomes_project 18 44183584 44183692 + Gm23610 snRNA snRNA MGP_BALBcJ_T0049399.1 MGP_BALBcJ_G0024311.1 mouse_genomes_project 18 34965326 35077409 + MGP_BALBcJ_P0049399 Pcdhgb5 protein_coding protein_coding MGP_BALBcJ_T0049400.1 MGP_BALBcJ_G0024311.1 mouse_genomes_project 18 34965371 34969941 + Pcdhgb5 protein_coding retained_intron MGP_BALBcJ_T0049905.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66870909 67091132 + MGP_BALBcJ_P0049905 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049906.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66871699 67212820 + MGP_BALBcJ_P0049906 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049907.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66872042 67217568 + MGP_BALBcJ_P0049907 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049908.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66872045 67211853 + MGP_BALBcJ_P0049908 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049909.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66872082 67211741 + MGP_BALBcJ_P0049909 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049910.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873274 67211867 + MGP_BALBcJ_P0049910 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049911.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873276 67213019 + MGP_BALBcJ_P0049911 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049912.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873276 67216456 + MGP_BALBcJ_P0049912 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049913.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873338 67091797 + MGP_BALBcJ_P0049913 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049914.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873357 67211675 + MGP_BALBcJ_P0049914 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049915.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873359 67164840 + MGP_BALBcJ_P0049915 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049916.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873369 67015052 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049917.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873459 67211675 + MGP_BALBcJ_P0049917 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049918.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873782 67161659 + MGP_BALBcJ_P0049918 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049919.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66873990 67211702 + MGP_BALBcJ_P0049919 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049920.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66874894 67211675 + MGP_BALBcJ_P0049920 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049921.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66874940 66884951 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049922.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66875880 67091691 + MGP_BALBcJ_P0049922 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049923.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66875891 67211915 + MGP_BALBcJ_P0049923 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049924.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66875893 67091698 + MGP_BALBcJ_P0049924 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049925.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66876144 67211926 + MGP_BALBcJ_P0049925 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049926.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66876203 67180427 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049927.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66876557 67170936 + MGP_BALBcJ_P0049927 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049928.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 66943009 67211916 + MGP_BALBcJ_P0049928 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049929.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67026589 67164888 + MGP_BALBcJ_P0049929 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049930.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67027870 67211722 + MGP_BALBcJ_P0049930 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049931.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67028009 67186223 + MGP_BALBcJ_P0049931 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049932.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67028131 67180468 + MGP_BALBcJ_P0049932 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049933.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67046548 67211731 + MGP_BALBcJ_P0049933 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049934.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67046787 67170992 + MGP_BALBcJ_P0049934 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049935.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67046835 67211675 + MGP_BALBcJ_P0049935 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049936.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67046845 67211754 + MGP_BALBcJ_P0049936 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049937.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67046890 67164925 + MGP_BALBcJ_P0049937 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049938.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67048229 67170952 + MGP_BALBcJ_P0049938 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049939.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67048367 67211599 + MGP_BALBcJ_P0049939 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049940.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67048570 67186422 + MGP_BALBcJ_P0049940 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049941.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67048593 67051412 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0049942.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67048607 67091737 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049943.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67048930 67211737 + MGP_BALBcJ_P0049943 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049944.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67049070 67164887 + MGP_BALBcJ_P0049944 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049945.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67049250 67161705 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0049946.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67090056 67179224 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049947.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67090384 67164966 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049948.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67120709 67211922 + MGP_BALBcJ_P0049948 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049949.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121070 67186370 + MGP_BALBcJ_P0049949 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049950.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121111 67204206 + MGP_BALBcJ_P0049950 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049951.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121117 67211200 + MGP_BALBcJ_P0049951 Tcf4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049952.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121124 67213021 + MGP_BALBcJ_P0049952 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049953.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121125 67161795 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0049954.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121125 67125141 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0049955.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121142 67186339 + Tcf4 protein_coding processed_transcript MGP_BALBcJ_T0049956.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121281 67179248 + MGP_BALBcJ_P0049956 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049957.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67121880 67186237 + MGP_BALBcJ_P0049957 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049958.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67127281 67180415 + MGP_BALBcJ_P0049958 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049959.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67140115 67211675 + MGP_BALBcJ_P0049959 Tcf4 protein_coding protein_coding MGP_BALBcJ_T0049960.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67185138 67188763 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0049961.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67208174 67213021 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0049962.1 MGP_BALBcJ_G0024505.1 mouse_genomes_project 18 67210856 67212110 + Tcf4 protein_coding retained_intron MGP_BALBcJ_T0003789.1 MGP_BALBcJ_G0003404.1 mouse_genomes_project 18 33041031 33041727 - Gm29417 antisense antisense MGP_BALBcJ_T0049200.1 MGP_BALBcJ_G0024220.1 mouse_genomes_project 18 32078361 32107615 - MGP_BALBcJ_P0049200 Etf1 protein_coding protein_coding MGP_BALBcJ_T0049201.1 MGP_BALBcJ_G0024220.1 mouse_genomes_project 18 32107441 32107549 - MGP_BALBcJ_P0049201 Etf1 protein_coding protein_coding MGP_BALBcJ_T0049016.1 MGP_BALBcJ_G0024143.1 mouse_genomes_project 18 17646975 17679387 + MGP_BALBcJ_P0049016 Dsg3 protein_coding protein_coding MGP_BALBcJ_T0006993.1 MGP_BALBcJ_G0005747.1 mouse_genomes_project 18 30125191 30148619 - 2310026I22Rik lincRNA lincRNA MGP_BALBcJ_T0049355.1 MGP_BALBcJ_G0024276.1 mouse_genomes_project 18 34485395 34487983 + MGP_BALBcJ_P0049355 Pcdhb1 protein_coding protein_coding MGP_BALBcJ_T0050035.1 MGP_BALBcJ_G0024531.1 mouse_genomes_project 18 72939701 72968785 + MGP_BALBcJ_P0050035 Smad7 protein_coding protein_coding MGP_BALBcJ_T0050036.1 MGP_BALBcJ_G0024531.1 mouse_genomes_project 18 72941048 72968329 + MGP_BALBcJ_P0050036 Smad7 protein_coding protein_coding MGP_BALBcJ_T0050037.1 MGP_BALBcJ_G0024531.1 mouse_genomes_project 18 72941155 72966836 + MGP_BALBcJ_P0050037 Smad7 protein_coding protein_coding MGP_BALBcJ_T0050038.1 MGP_BALBcJ_G0024531.1 mouse_genomes_project 18 72942141 72967215 + MGP_BALBcJ_P0050038 Smad7 protein_coding protein_coding MGP_BALBcJ_T0050039.1 MGP_BALBcJ_G0024531.1 mouse_genomes_project 18 72947084 72966851 + Smad7 protein_coding processed_transcript MGP_BALBcJ_T0013317.1 MGP_BALBcJ_G0011414.1 mouse_genomes_project 18 39546989 39548277 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049973.1 MGP_BALBcJ_G0024510.1 mouse_genomes_project 18 68009044 68036152 + MGP_BALBcJ_P0049973 Stard6 protein_coding protein_coding MGP_BALBcJ_T0049974.1 MGP_BALBcJ_G0024510.1 mouse_genomes_project 18 68009162 68035893 + MGP_BALBcJ_P0049974 Stard6 protein_coding protein_coding MGP_BALBcJ_T0049975.1 MGP_BALBcJ_G0024510.1 mouse_genomes_project 18 68009218 68035723 + MGP_BALBcJ_P0049975 Stard6 protein_coding protein_coding MGP_BALBcJ_T0049976.1 MGP_BALBcJ_G0024510.1 mouse_genomes_project 18 68009256 68035897 + MGP_BALBcJ_P0049976 Stard6 protein_coding protein_coding MGP_BALBcJ_T0049977.1 MGP_BALBcJ_G0024510.1 mouse_genomes_project 18 68009606 68020627 + MGP_BALBcJ_P0049977 Stard6 protein_coding protein_coding MGP_BALBcJ_T0049978.1 MGP_BALBcJ_G0024510.1 mouse_genomes_project 18 68009787 68033766 + MGP_BALBcJ_P0049978 Stard6 protein_coding protein_coding MGP_BALBcJ_T0003823.1 MGP_BALBcJ_G0003430.1 mouse_genomes_project 18 82443611 82444850 - Gm16146 antisense antisense MGP_BALBcJ_T0049892.1 MGP_BALBcJ_G0024500.1 mouse_genomes_project 18 65788712 65830109 - MGP_BALBcJ_P0049892 Fam210a protein_coding protein_coding MGP_BALBcJ_T0049893.1 MGP_BALBcJ_G0024500.1 mouse_genomes_project 18 65804441 65829978 - MGP_BALBcJ_P0049893 Fam210a protein_coding protein_coding MGP_BALBcJ_T0013323.1 MGP_BALBcJ_G0011420.1 mouse_genomes_project 18 44698467 44699814 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003783.1 MGP_BALBcJ_G0003401.1 mouse_genomes_project 18 17737925 17800125 - Gm16090 antisense antisense MGP_BALBcJ_T0049106.1 MGP_BALBcJ_G0024177.1 mouse_genomes_project 18 28656501 28666097 - MGP_BALBcJ_P0049106 Syt4 protein_coding protein_coding MGP_BALBcJ_T0099614.1 MGP_BALBcJ_G0037650.1 mouse_genomes_project 18 55021935 55022041 - Gm26038 snRNA snRNA MGP_BALBcJ_T0049505.1 MGP_BALBcJ_G0024341.1 mouse_genomes_project 18 39259917 39276574 - MGP_BALBcJ_P0049505 Grxcr2 protein_coding protein_coding MGP_BALBcJ_T0050040.1 MGP_BALBcJ_G0024532.1 mouse_genomes_project 18 73005397 73274432 - MGP_BALBcJ_P0050040 Ctif protein_coding protein_coding MGP_BALBcJ_T0049751.1 MGP_BALBcJ_G0024442.1 mouse_genomes_project 18 58509575 58555862 - MGP_BALBcJ_P0049751 Hmgxb3 protein_coding protein_coding MGP_BALBcJ_T0010216.1 MGP_BALBcJ_G0008341.1 mouse_genomes_project 18 7660338 7660460 + Mir1b miRNA miRNA MGP_BALBcJ_T0048991.1 MGP_BALBcJ_G0024128.1 mouse_genomes_project 18 11401253 11401697 + MGP_BALBcJ_P0048991 Gm5160 protein_coding protein_coding MGP_BALBcJ_T0049098.1 MGP_BALBcJ_G0024175.1 mouse_genomes_project 18 27469822 27550057 + MGP_BALBcJ_P0049098 Pik3c3 protein_coding protein_coding MGP_BALBcJ_T0049099.1 MGP_BALBcJ_G0024175.1 mouse_genomes_project 18 27469945 27527335 + MGP_BALBcJ_P0049099 Pik3c3 protein_coding protein_coding MGP_BALBcJ_T0049100.1 MGP_BALBcJ_G0024175.1 mouse_genomes_project 18 27469947 27544970 + MGP_BALBcJ_P0049100 Pik3c3 protein_coding protein_coding MGP_BALBcJ_T0049101.1 MGP_BALBcJ_G0024175.1 mouse_genomes_project 18 27470002 27550051 + MGP_BALBcJ_P0049101 Pik3c3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049744.1 MGP_BALBcJ_G0024438.1 mouse_genomes_project 18 58365950 58386509 - MGP_BALBcJ_P0049744 Slc6a7 protein_coding protein_coding MGP_BALBcJ_T0049080.1 MGP_BALBcJ_G0024168.1 mouse_genomes_project 18 21808383 21845024 + MGP_BALBcJ_P0049080 Elp2 protein_coding protein_coding MGP_BALBcJ_T0011443.1 MGP_BALBcJ_G0009568.1 mouse_genomes_project 18 64147823 64148142 + Gm22219 misc_RNA misc_RNA MGP_BALBcJ_T0048998.1 MGP_BALBcJ_G0024132.1 mouse_genomes_project 18 11957220 12056312 - MGP_BALBcJ_P0048998 Kctd1 protein_coding protein_coding MGP_BALBcJ_T0048999.1 MGP_BALBcJ_G0024132.1 mouse_genomes_project 18 11957220 12145927 - MGP_BALBcJ_P0048999 Kctd1 protein_coding protein_coding MGP_BALBcJ_T0011437.1 MGP_BALBcJ_G0009562.1 mouse_genomes_project 18 39874261 39874417 + Gm27457 misc_RNA misc_RNA MGP_BALBcJ_T0098748.1 MGP_BALBcJ_G0036802.1 mouse_genomes_project 18 72334705 72334784 - Scarna17 scaRNA scaRNA MGP_BALBcJ_T0049572.1 MGP_BALBcJ_G0024372.1 mouse_genomes_project 18 43518208 43560611 - MGP_BALBcJ_P0049572 Pggt1b protein_coding protein_coding MGP_BALBcJ_T0050075.1 MGP_BALBcJ_G0024540.1 mouse_genomes_project 18 74741328 74813218 + MGP_BALBcJ_P0050075 St8sia5 protein_coding protein_coding MGP_BALBcJ_T0050076.1 MGP_BALBcJ_G0024540.1 mouse_genomes_project 18 74741454 74813088 + MGP_BALBcJ_P0050076 St8sia5 protein_coding protein_coding MGP_BALBcJ_T0049788.1 MGP_BALBcJ_G0024459.1 mouse_genomes_project 18 60005411 60146893 - MGP_BALBcJ_P0049788 Spink13 protein_coding protein_coding MGP_BALBcJ_T0010248.1 MGP_BALBcJ_G0008373.1 mouse_genomes_project 18 65789445 65789499 - Mir7219 miRNA miRNA MGP_BALBcJ_T0049879.1 MGP_BALBcJ_G0024492.1 mouse_genomes_project 18 64991652 65115705 - MGP_BALBcJ_P0049879 Spire1 protein_coding protein_coding MGP_BALBcJ_T0049880.1 MGP_BALBcJ_G0024492.1 mouse_genomes_project 18 64991658 65057495 - MGP_BALBcJ_P0049880 Spire1 protein_coding protein_coding MGP_BALBcJ_T0011445.1 MGP_BALBcJ_G0009570.1 mouse_genomes_project 18 71144966 71145073 + Gm26438 misc_RNA misc_RNA MGP_BALBcJ_T0050104.1 MGP_BALBcJ_G0024551.1 mouse_genomes_project 18 76284947 76645426 - MGP_BALBcJ_P0050104 Setbp1 protein_coding protein_coding MGP_BALBcJ_T0013324.1 MGP_BALBcJ_G0011421.1 mouse_genomes_project 18 45901248 45902254 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049124.1 MGP_BALBcJ_G0024191.1 mouse_genomes_project 18 29379435 29455924 + MGP_BALBcJ_P0049124 Map3k2 protein_coding protein_coding MGP_BALBcJ_T0010255.1 MGP_BALBcJ_G0008380.1 mouse_genomes_project 18 79559542 79559613 - Mir5127 miRNA miRNA MGP_BALBcJ_T0099628.1 MGP_BALBcJ_G0037664.1 mouse_genomes_project 18 82326858 82327014 - Gm25005 snRNA snRNA MGP_BALBcJ_T0100863.1 MGP_BALBcJ_G0038899.1 mouse_genomes_project 18 27676308 27676420 + Gm22870 snoRNA snoRNA MGP_BALBcJ_T0048904.1 MGP_BALBcJ_G0024099.1 mouse_genomes_project 18 6069720 6073067 + MGP_BALBcJ_P0048904 Fzd8 protein_coding protein_coding MGP_BALBcJ_T0010211.1 MGP_BALBcJ_G0008336.1 mouse_genomes_project 18 3347642 3347725 - Mir1893 miRNA miRNA MGP_BALBcJ_T0011444.1 MGP_BALBcJ_G0009569.1 mouse_genomes_project 18 67304978 67305088 - Gm22508 misc_RNA misc_RNA MGP_BALBcJ_T0049130.1 MGP_BALBcJ_G0024194.1 mouse_genomes_project 18 29749953 29781580 - MGP_BALBcJ_P0049130 Gypc protein_coding protein_coding MGP_BALBcJ_T0049131.1 MGP_BALBcJ_G0024194.1 mouse_genomes_project 18 29749956 29781526 - MGP_BALBcJ_P0049131 Gypc protein_coding protein_coding MGP_BALBcJ_T0049132.1 MGP_BALBcJ_G0024194.1 mouse_genomes_project 18 29751423 29757050 - MGP_BALBcJ_P0049132 Gypc protein_coding protein_coding MGP_BALBcJ_T0098555.1 MGP_BALBcJ_G0036609.1 mouse_genomes_project 18 66698938 66699072 - Gm23536 rRNA rRNA MGP_BALBcJ_T0050210.1 MGP_BALBcJ_G0024584.1 mouse_genomes_project 18 88079114 88112287 + MGP_BALBcJ_P0050210 Tmx3 protein_coding protein_coding MGP_BALBcJ_T0049629.1 MGP_BALBcJ_G0024394.1 mouse_genomes_project 18 49815910 49842815 - MGP_BALBcJ_P0049629 Lox protein_coding protein_coding MGP_BALBcJ_T0049630.1 MGP_BALBcJ_G0024394.1 mouse_genomes_project 18 49817079 49842266 - MGP_BALBcJ_P0049630 Lox protein_coding protein_coding MGP_BALBcJ_T0049749.1 MGP_BALBcJ_G0024441.1 mouse_genomes_project 18 58483996 58509431 + MGP_BALBcJ_P0049749 Csf1r protein_coding protein_coding MGP_BALBcJ_T0049750.1 MGP_BALBcJ_G0024441.1 mouse_genomes_project 18 58484279 58510446 + MGP_BALBcJ_P0049750 Csf1r protein_coding protein_coding MGP_BALBcJ_T0099615.1 MGP_BALBcJ_G0037651.1 mouse_genomes_project 18 58516695 58516800 - Gm26403 snRNA snRNA MGP_BALBcJ_T0049364.1 MGP_BALBcJ_G0024283.1 mouse_genomes_project 18 34572261 34573746 + MGP_BALBcJ_P0049364 Pcdhb8 protein_coding protein_coding MGP_BALBcJ_T0049365.1 MGP_BALBcJ_G0024283.1 mouse_genomes_project 18 34572411 34575745 + MGP_BALBcJ_P0049365 Pcdhb8 protein_coding protein_coding MGP_BALBcJ_T0001004.1 MGP_BALBcJ_G0000932.1 mouse_genomes_project 18 59332320 59332558 - TEC TEC MGP_BALBcJ_T0100888.1 MGP_BALBcJ_G0038924.1 mouse_genomes_project 18 85513289 85513423 - Gm24987 snoRNA snoRNA MGP_BALBcJ_T0049627.1 MGP_BALBcJ_G0024392.1 mouse_genomes_project 18 49651733 49653184 + MGP_BALBcJ_P0049627 Ftmt protein_coding protein_coding MGP_BALBcJ_T0099619.1 MGP_BALBcJ_G0037655.1 mouse_genomes_project 18 61325951 61326026 - Gm24384 snRNA snRNA MGP_BALBcJ_T0049169.1 MGP_BALBcJ_G0024209.1 mouse_genomes_project 18 31750165 31768364 - MGP_BALBcJ_P0049169 4933408B17Rik protein_coding protein_coding MGP_BALBcJ_T0049170.1 MGP_BALBcJ_G0024209.1 mouse_genomes_project 18 31750264 31768241 - MGP_BALBcJ_P0049170 4933408B17Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0007000.1 MGP_BALBcJ_G0005752.1 mouse_genomes_project 18 34888540 34894852 + 3222401L13Rik lincRNA lincRNA MGP_BALBcJ_T0007001.1 MGP_BALBcJ_G0005752.1 mouse_genomes_project 18 34888997 34891845 + 3222401L13Rik lincRNA lincRNA MGP_BALBcJ_T0049377.1 MGP_BALBcJ_G0024295.1 mouse_genomes_project 18 34724987 34728946 + MGP_BALBcJ_P0049377 Pcdhb20 protein_coding protein_coding MGP_BALBcJ_T0100889.1 MGP_BALBcJ_G0038925.1 mouse_genomes_project 18 88072841 88072970 + Gm25418 snoRNA snoRNA MGP_BALBcJ_T0099626.1 MGP_BALBcJ_G0037662.1 mouse_genomes_project 18 79925093 79925223 - Gm25060 snRNA snRNA MGP_BALBcJ_T0049020.1 MGP_BALBcJ_G0024145.1 mouse_genomes_project 18 17800114 17809189 + MGP_BALBcJ_P0049020 Ttr protein_coding protein_coding MGP_BALBcJ_T0102370.1 MGP_BALBcJ_G0040186.1 mouse_genomes_project 18 40065 41811 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0007022.1 MGP_BALBcJ_G0005768.1 mouse_genomes_project 18 73092869 73101165 + Gm10532 lincRNA lincRNA MGP_BALBcJ_T0049502.1 MGP_BALBcJ_G0024338.1 mouse_genomes_project 18 37525578 37526302 + MGP_BALBcJ_P0049502 2900055J20Rik protein_coding protein_coding MGP_BALBcJ_T0049653.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53850841 53869666 - Aldh7a1 protein_coding processed_transcript MGP_BALBcJ_T0049654.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53867080 53915828 - MGP_BALBcJ_P0049654 Aldh7a1 protein_coding protein_coding MGP_BALBcJ_T0049655.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53869421 53905265 - MGP_BALBcJ_P0049655 Aldh7a1 protein_coding protein_coding MGP_BALBcJ_T0049656.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53869560 53905246 - MGP_BALBcJ_P0049656 Aldh7a1 protein_coding protein_coding MGP_BALBcJ_T0049657.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53869566 53905155 - MGP_BALBcJ_P0049657 Aldh7a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049658.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53875630 53880722 - Aldh7a1 protein_coding retained_intron MGP_BALBcJ_T0049659.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53880352 53905163 - MGP_BALBcJ_P0049659 Aldh7a1 protein_coding protein_coding MGP_BALBcJ_T0049660.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53889921 53902362 - Aldh7a1 protein_coding retained_intron MGP_BALBcJ_T0049661.1 MGP_BALBcJ_G0024407.1 mouse_genomes_project 18 53893323 53905134 - MGP_BALBcJ_P0049661 Aldh7a1 protein_coding protein_coding MGP_BALBcJ_T0049874.1 MGP_BALBcJ_G0024487.1 mouse_genomes_project 18 64783061 64813348 + MGP_BALBcJ_P0049874 Impa2 protein_coding protein_coding MGP_BALBcJ_T0049251.1 MGP_BALBcJ_G0024234.1 mouse_genomes_project 18 32902455 32928695 + 1700066B19Rik protein_coding processed_transcript MGP_BALBcJ_T0049258.1 MGP_BALBcJ_G0024234.1 mouse_genomes_project 18 32925907 32929794 + MGP_BALBcJ_P0049258 1700066B19Rik protein_coding protein_coding MGP_BALBcJ_T0049299.1 MGP_BALBcJ_G0024248.1 mouse_genomes_project 18 33889687 33895509 - MGP_BALBcJ_P0049299 Sra1 protein_coding protein_coding MGP_BALBcJ_T0049300.1 MGP_BALBcJ_G0024248.1 mouse_genomes_project 18 33890252 33893577 - MGP_BALBcJ_P0049300 Sra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049301.1 MGP_BALBcJ_G0024248.1 mouse_genomes_project 18 33890278 33893597 - Sra1 protein_coding retained_intron MGP_BALBcJ_T0049302.1 MGP_BALBcJ_G0024248.1 mouse_genomes_project 18 33890435 33893576 - MGP_BALBcJ_P0049302 Sra1 protein_coding protein_coding MGP_BALBcJ_T0049303.1 MGP_BALBcJ_G0024248.1 mouse_genomes_project 18 33893112 33893567 - Sra1 protein_coding retained_intron MGP_BALBcJ_T0049304.1 MGP_BALBcJ_G0024248.1 mouse_genomes_project 18 33895472 33902470 - MGP_BALBcJ_P0049304 Sra1 protein_coding protein_coding MGP_BALBcJ_T0049804.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60430328 60812128 - MGP_BALBcJ_P0049804 protein_coding protein_coding MGP_BALBcJ_T0049805.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60430331 60448429 - MGP_BALBcJ_P0049805 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049806.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60431663 60666179 - MGP_BALBcJ_P0049806 protein_coding unknown_likely_coding MGP_BALBcJ_T0049807.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60437123 60446100 - protein_coding retained_intron MGP_BALBcJ_T0049808.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60437569 60451129 - protein_coding retained_intron MGP_BALBcJ_T0049809.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60472624 60811402 - MGP_BALBcJ_P0049809 protein_coding protein_coding MGP_BALBcJ_T0049810.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60493193 60563704 - MGP_BALBcJ_P0049810 protein_coding protein_coding MGP_BALBcJ_T0049811.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60524057 60599822 - MGP_BALBcJ_P0049811 protein_coding protein_coding MGP_BALBcJ_T0049812.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60524107 60812128 - MGP_BALBcJ_P0049812 protein_coding protein_coding MGP_BALBcJ_T0049813.1 MGP_BALBcJ_G0024464.1 mouse_genomes_project 18 60538119 60812114 - protein_coding retained_intron MGP_BALBcJ_T0100864.1 MGP_BALBcJ_G0038900.1 mouse_genomes_project 18 28685466 28685599 - Gm25396 snoRNA snoRNA MGP_BALBcJ_T0013315.1 MGP_BALBcJ_G0011412.1 mouse_genomes_project 18 36608201 36608552 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050032.1 MGP_BALBcJ_G0024528.1 mouse_genomes_project 18 72562356 72565637 + MGP_BALBcJ_P0050032 Rpl17 protein_coding protein_coding MGP_BALBcJ_T0011428.1 MGP_BALBcJ_G0009553.1 mouse_genomes_project 18 18483556 18483666 + Gm24372 misc_RNA misc_RNA MGP_BALBcJ_T0049373.1 MGP_BALBcJ_G0024291.1 mouse_genomes_project 18 34698570 34703755 + MGP_BALBcJ_P0049373 Pcdhb16 protein_coding protein_coding MGP_BALBcJ_T0049195.1 MGP_BALBcJ_G0024217.1 mouse_genomes_project 18 31951443 32014559 + MGP_BALBcJ_P0049195 Kdm3b protein_coding protein_coding MGP_BALBcJ_T0049196.1 MGP_BALBcJ_G0024217.1 mouse_genomes_project 18 31994661 32014194 + MGP_BALBcJ_P0049196 Kdm3b protein_coding unknown_likely_coding MGP_BALBcJ_T0099630.1 MGP_BALBcJ_G0037666.1 mouse_genomes_project 18 87817924 87817988 + Gm23859 snRNA snRNA MGP_BALBcJ_T0049533.1 MGP_BALBcJ_G0024354.1 mouse_genomes_project 18 41033513 41046219 - MGP_BALBcJ_P0049533 Spink1 protein_coding protein_coding MGP_BALBcJ_T0000997.1 MGP_BALBcJ_G0000925.1 mouse_genomes_project 18 32764520 32766675 + TEC TEC MGP_BALBcJ_T0049345.1 MGP_BALBcJ_G0024270.1 mouse_genomes_project 18 34224887 34406362 + MGP_BALBcJ_P0049345 Pcdha9 protein_coding protein_coding MGP_BALBcJ_T0048823.1 MGP_BALBcJ_G0024084.1 mouse_genomes_project 18 1200293 1221882 - MGP_BALBcJ_P0048823 Map3k8 protein_coding protein_coding MGP_BALBcJ_T0048824.1 MGP_BALBcJ_G0024084.1 mouse_genomes_project 18 1200306 1221886 - MGP_BALBcJ_P0048824 Map3k8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048825.1 MGP_BALBcJ_G0024084.1 mouse_genomes_project 18 1200307 1205262 - Map3k8 protein_coding processed_transcript MGP_BALBcJ_T0048826.1 MGP_BALBcJ_G0024084.1 mouse_genomes_project 18 1202811 1204015 - Map3k8 protein_coding retained_intron MGP_BALBcJ_T0048827.1 MGP_BALBcJ_G0024084.1 mouse_genomes_project 18 1216423 1221944 - Map3k8 protein_coding retained_intron MGP_BALBcJ_T0049012.1 MGP_BALBcJ_G0024139.1 mouse_genomes_project 18 17143124 17177449 - MGP_BALBcJ_P0049012 Dsc1 protein_coding protein_coding MGP_BALBcJ_T0099599.1 MGP_BALBcJ_G0037635.1 mouse_genomes_project 18 18567997 18568104 - Gm22886 snRNA snRNA MGP_BALBcJ_T0049824.1 MGP_BALBcJ_G0024470.1 mouse_genomes_project 18 61919695 61937284 - MGP_BALBcJ_P0049824 Nars protein_coding protein_coding MGP_BALBcJ_T0049511.1 MGP_BALBcJ_G0024344.1 mouse_genomes_project 18 39464812 39482360 - MGP_BALBcJ_P0049511 Plac8l1 protein_coding protein_coding MGP_BALBcJ_T0099595.1 MGP_BALBcJ_G0037631.1 mouse_genomes_project 18 6617474 6617577 - Gm23350 snRNA snRNA MGP_BALBcJ_T0049662.1 MGP_BALBcJ_G0024408.1 mouse_genomes_project 18 53905379 53930134 + MGP_BALBcJ_P0049662 Phax protein_coding protein_coding MGP_BALBcJ_T0049663.1 MGP_BALBcJ_G0024408.1 mouse_genomes_project 18 53905529 53923164 + MGP_BALBcJ_P0049663 Phax protein_coding protein_coding MGP_BALBcJ_T0049664.1 MGP_BALBcJ_G0024408.1 mouse_genomes_project 18 53915698 53930657 + MGP_BALBcJ_P0049664 Phax protein_coding protein_coding MGP_BALBcJ_T0100867.1 MGP_BALBcJ_G0038903.1 mouse_genomes_project 18 31249029 31249155 + Gm24432 snoRNA snoRNA MGP_BALBcJ_T0010231.1 MGP_BALBcJ_G0008356.1 mouse_genomes_project 18 40787890 40787964 - miRNA miRNA MGP_BALBcJ_T0049380.1 MGP_BALBcJ_G0024298.1 mouse_genomes_project 18 34870470 34871839 - MGP_BALBcJ_P0049380 Slc25a2 protein_coding protein_coding MGP_BALBcJ_T0050016.1 MGP_BALBcJ_G0024524.1 mouse_genomes_project 18 71822372 71908075 + MGP_BALBcJ_P0050016 Cfap53 protein_coding protein_coding MGP_BALBcJ_T0050017.1 MGP_BALBcJ_G0024524.1 mouse_genomes_project 18 71822404 71908073 + MGP_BALBcJ_P0050017 Cfap53 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050018.1 MGP_BALBcJ_G0024524.1 mouse_genomes_project 18 71891489 71908019 + Cfap53 protein_coding processed_transcript MGP_BALBcJ_T0049279.1 MGP_BALBcJ_G0024243.1 mouse_genomes_project 18 33627790 33681315 - MGP_BALBcJ_P0049279 Pfdn1 protein_coding protein_coding MGP_BALBcJ_T0010258.1 MGP_BALBcJ_G0008383.1 mouse_genomes_project 18 87334748 87334818 + Gm22694 miRNA miRNA MGP_BALBcJ_T0049084.1 MGP_BALBcJ_G0024172.1 mouse_genomes_project 18 22336991 22379410 - MGP_BALBcJ_P0049084 Tpgs2 protein_coding protein_coding MGP_BALBcJ_T0049085.1 MGP_BALBcJ_G0024172.1 mouse_genomes_project 18 22346168 22379723 - MGP_BALBcJ_P0049085 Tpgs2 protein_coding protein_coding MGP_BALBcJ_T0003817.1 MGP_BALBcJ_G0003425.1 mouse_genomes_project 18 67473239 67499571 - 1700061H18Rik antisense antisense MGP_BALBcJ_T0003818.1 MGP_BALBcJ_G0003425.1 mouse_genomes_project 18 67476849 67499558 - 1700061H18Rik antisense antisense MGP_BALBcJ_T0013342.1 MGP_BALBcJ_G0011439.1 mouse_genomes_project 18 87128019 87128344 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049102.1 MGP_BALBcJ_G0024176.1 mouse_genomes_project 18 28169219 28530834 - MGP_BALBcJ_P0049102 Rit2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049103.1 MGP_BALBcJ_G0024176.1 mouse_genomes_project 18 28170045 28530677 - MGP_BALBcJ_P0049103 Rit2 protein_coding protein_coding MGP_BALBcJ_T0049104.1 MGP_BALBcJ_G0024176.1 mouse_genomes_project 18 28363409 28429052 - Rit2 protein_coding processed_transcript MGP_BALBcJ_T0049105.1 MGP_BALBcJ_G0024176.1 mouse_genomes_project 18 28422729 28530655 - MGP_BALBcJ_P0049105 Rit2 protein_coding protein_coding MGP_BALBcJ_T0013288.1 MGP_BALBcJ_G0011385.1 mouse_genomes_project 18 6771341 6772160 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049017.1 MGP_BALBcJ_G0024144.1 mouse_genomes_project 18 17696150 17744689 + MGP_BALBcJ_P0049017 Dsg2 protein_coding protein_coding MGP_BALBcJ_T0049018.1 MGP_BALBcJ_G0024144.1 mouse_genomes_project 18 17696231 17724868 + MGP_BALBcJ_P0049018 Dsg2 protein_coding protein_coding MGP_BALBcJ_T0049019.1 MGP_BALBcJ_G0024144.1 mouse_genomes_project 18 17696322 17722231 + MGP_BALBcJ_P0049019 Dsg2 protein_coding protein_coding MGP_BALBcJ_T0049826.1 MGP_BALBcJ_G0024472.1 mouse_genomes_project 18 62318474 62651077 + MGP_BALBcJ_P0049826 Nedd4l protein_coding protein_coding MGP_BALBcJ_T0049827.1 MGP_BALBcJ_G0024472.1 mouse_genomes_project 18 62454849 62651077 + MGP_BALBcJ_P0049827 Nedd4l protein_coding protein_coding MGP_BALBcJ_T0049828.1 MGP_BALBcJ_G0024472.1 mouse_genomes_project 18 62570711 62651072 + MGP_BALBcJ_P0049828 Nedd4l protein_coding unknown_likely_coding MGP_BALBcJ_T0003821.1 MGP_BALBcJ_G0003428.1 mouse_genomes_project 18 77865375 77868644 + Gm26676 antisense antisense MGP_BALBcJ_T0048909.1 MGP_BALBcJ_G0024104.1 mouse_genomes_project 18 6582974 6583448 - MGP_BALBcJ_P0048909 Gm17430 protein_coding protein_coding MGP_BALBcJ_T0017614.1 MGP_BALBcJ_G0015309.1 mouse_genomes_project 18 75366396 75369528 - F830208F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0017615.1 MGP_BALBcJ_G0015309.1 mouse_genomes_project 18 75366396 75369881 - F830208F22Rik processed_transcript processed_transcript MGP_BALBcJ_T0010246.1 MGP_BALBcJ_G0008371.1 mouse_genomes_project 18 62681798 62681864 + Mir122 miRNA miRNA MGP_BALBcJ_T0050107.1 MGP_BALBcJ_G0024554.1 mouse_genomes_project 18 77655562 77680730 - MGP_BALBcJ_P0050107 Adnp2 protein_coding protein_coding MGP_BALBcJ_T0049650.1 MGP_BALBcJ_G0024404.1 mouse_genomes_project 18 51179815 51273187 + MGP_BALBcJ_P0049650 Csnk1g3 protein_coding protein_coding MGP_BALBcJ_T0049671.1 MGP_BALBcJ_G0024411.1 mouse_genomes_project 18 54112475 54276649 - MGP_BALBcJ_P0049671 March3 protein_coding protein_coding MGP_BALBcJ_T0049672.1 MGP_BALBcJ_G0024411.1 mouse_genomes_project 18 54129037 54165911 - MGP_BALBcJ_P0049672 March3 protein_coding protein_coding MGP_BALBcJ_T0049673.1 MGP_BALBcJ_G0024411.1 mouse_genomes_project 18 54157562 54276616 - March3 protein_coding retained_intron MGP_BALBcJ_T0098714.1 MGP_BALBcJ_G0036768.1 mouse_genomes_project 18 24136354 24136582 - Gm26106 ribozyme ribozyme MGP_BALBcJ_T0049406.1 MGP_BALBcJ_G0024316.1 mouse_genomes_project 18 34990413 35077409 + MGP_BALBcJ_P0049406 Pcdhga11 protein_coding protein_coding MGP_BALBcJ_T0049722.1 MGP_BALBcJ_G0024432.1 mouse_genomes_project 18 58049130 58076462 - MGP_BALBcJ_P0049722 Ndst1 protein_coding protein_coding MGP_BALBcJ_T0100877.1 MGP_BALBcJ_G0038913.1 mouse_genomes_project 18 55963710 55963841 - Gm23270 snoRNA snoRNA MGP_BALBcJ_T0049128.1 MGP_BALBcJ_G0024193.1 mouse_genomes_project 18 29597029 29655858 + MGP_BALBcJ_P0049128 Bin1 protein_coding protein_coding MGP_BALBcJ_T0049129.1 MGP_BALBcJ_G0024193.1 mouse_genomes_project 18 29597029 29655858 + MGP_BALBcJ_P0049129 Bin1 protein_coding protein_coding MGP_BALBcJ_T0049317.1 MGP_BALBcJ_G0024255.1 mouse_genomes_project 18 33983420 33986896 + MGP_BALBcJ_P0049317 Wdr55 protein_coding protein_coding MGP_BALBcJ_T0050001.1 MGP_BALBcJ_G0024518.1 mouse_genomes_project 18 71387248 71406774 + MGP_BALBcJ_P0050001 Mro protein_coding protein_coding MGP_BALBcJ_T0050002.1 MGP_BALBcJ_G0024518.1 mouse_genomes_project 18 71387250 71407152 + MGP_BALBcJ_P0050002 Mro protein_coding protein_coding MGP_BALBcJ_T0050003.1 MGP_BALBcJ_G0024518.1 mouse_genomes_project 18 71387257 71409351 + Mro protein_coding processed_transcript MGP_BALBcJ_T0050004.1 MGP_BALBcJ_G0024518.1 mouse_genomes_project 18 71387265 71406774 + MGP_BALBcJ_P0050004 Mro protein_coding protein_coding MGP_BALBcJ_T0050005.1 MGP_BALBcJ_G0024518.1 mouse_genomes_project 18 71391837 71398410 + Mro protein_coding retained_intron MGP_BALBcJ_T0050006.1 MGP_BALBcJ_G0024518.1 mouse_genomes_project 18 71391878 71400105 + MGP_BALBcJ_P0050006 Mro protein_coding protein_coding MGP_BALBcJ_T0010243.1 MGP_BALBcJ_G0008368.1 mouse_genomes_project 18 58776308 58776374 - Mir378a miRNA miRNA MGP_BALBcJ_T0013343.1 MGP_BALBcJ_G0011440.1 mouse_genomes_project 18 87128582 87129041 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049825.1 MGP_BALBcJ_G0024471.1 mouse_genomes_project 18 61950840 62084283 - MGP_BALBcJ_P0049825 Atp8b1 protein_coding protein_coding MGP_BALBcJ_T0049334.1 MGP_BALBcJ_G0024262.1 mouse_genomes_project 18 34165266 34406362 + MGP_BALBcJ_P0049334 Pcdha3 protein_coding protein_coding MGP_BALBcJ_T0013311.1 MGP_BALBcJ_G0011408.1 mouse_genomes_project 18 34653856 34654727 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003808.1 MGP_BALBcJ_G0003421.1 mouse_genomes_project 18 54120476 54155582 + Gm15345 antisense antisense MGP_BALBcJ_T0049756.1 MGP_BALBcJ_G0024444.1 mouse_genomes_project 18 58600030 58668488 + MGP_BALBcJ_P0049756 Pde6a protein_coding protein_coding MGP_BALBcJ_T0049757.1 MGP_BALBcJ_G0024444.1 mouse_genomes_project 18 58653506 58668488 + MGP_BALBcJ_P0049757 Pde6a protein_coding protein_coding MGP_BALBcJ_T0049904.1 MGP_BALBcJ_G0024504.1 mouse_genomes_project 18 66473735 66479250 - MGP_BALBcJ_P0049904 4930546C10Rik protein_coding protein_coding MGP_BALBcJ_T0013328.1 MGP_BALBcJ_G0011425.1 mouse_genomes_project 18 50278877 50279928 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049857.1 MGP_BALBcJ_G0024479.1 mouse_genomes_project 18 63375500 63379952 - MGP_BALBcJ_P0049857 Rax protein_coding protein_coding MGP_BALBcJ_T0049623.1 MGP_BALBcJ_G0024388.1 mouse_genomes_project 18 47558196 47562847 + MGP_BALBcJ_P0049623 Fam170a protein_coding protein_coding MGP_BALBcJ_T0013329.1 MGP_BALBcJ_G0011426.1 mouse_genomes_project 18 51300859 51303051 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013325.1 MGP_BALBcJ_G0011422.1 mouse_genomes_project 18 47509617 47510362 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006990.1 MGP_BALBcJ_G0005744.1 mouse_genomes_project 18 29369839 29376779 + Gm26717 lincRNA lincRNA MGP_BALBcJ_T0098347.1 MGP_BALBcJ_G0036401.1 mouse_genomes_project 18 71842385 71842950 - pseudogene pseudogene MGP_BALBcJ_T0007018.1 MGP_BALBcJ_G0005764.1 mouse_genomes_project 18 60824466 60846248 + Gm26972 lincRNA lincRNA MGP_BALBcJ_T0007016.1 MGP_BALBcJ_G0005763.1 mouse_genomes_project 18 60157044 60161246 - 2700046A07Rik lincRNA lincRNA MGP_BALBcJ_T0007017.1 MGP_BALBcJ_G0005763.1 mouse_genomes_project 18 60159720 60161278 - 2700046A07Rik lincRNA lincRNA MGP_BALBcJ_T0049993.1 MGP_BALBcJ_G0024515.1 mouse_genomes_project 18 71173833 71231444 - MGP_BALBcJ_P0049993 Smad4 protein_coding protein_coding MGP_BALBcJ_T0049994.1 MGP_BALBcJ_G0024515.1 mouse_genomes_project 18 71174827 71213094 - MGP_BALBcJ_P0049994 Smad4 protein_coding protein_coding MGP_BALBcJ_T0049995.1 MGP_BALBcJ_G0024515.1 mouse_genomes_project 18 71174984 71177392 - Smad4 protein_coding processed_transcript MGP_BALBcJ_T0049996.1 MGP_BALBcJ_G0024515.1 mouse_genomes_project 18 71175038 71184653 - Smad4 protein_coding processed_transcript MGP_BALBcJ_T0049997.1 MGP_BALBcJ_G0024515.1 mouse_genomes_project 18 71175049 71197627 - Smad4 protein_coding processed_transcript MGP_BALBcJ_T0049998.1 MGP_BALBcJ_G0024515.1 mouse_genomes_project 18 71193645 71209981 - Smad4 protein_coding processed_transcript MGP_BALBcJ_T0010250.1 MGP_BALBcJ_G0008375.1 mouse_genomes_project 18 66550106 66550181 - Mir145b miRNA miRNA MGP_BALBcJ_T0013285.1 MGP_BALBcJ_G0011382.1 mouse_genomes_project 18 4778718 4779451 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049466.1 MGP_BALBcJ_G0024331.1 mouse_genomes_project 18 35666449 35712224 + MGP_BALBcJ_P0049466 Ndfip1 protein_coding protein_coding MGP_BALBcJ_T0003803.1 MGP_BALBcJ_G0003418.1 mouse_genomes_project 18 40245577 40248999 + 4933407I08Rik antisense antisense MGP_BALBcJ_T0099597.1 MGP_BALBcJ_G0037633.1 mouse_genomes_project 18 11627852 11628016 - Gm24924 snRNA snRNA MGP_BALBcJ_T0007011.1 MGP_BALBcJ_G0005760.1 mouse_genomes_project 18 55570275 55582653 + Gm26507 lincRNA lincRNA MGP_BALBcJ_T0050096.1 MGP_BALBcJ_G0024546.1 mouse_genomes_project 18 75367682 75458339 + MGP_BALBcJ_P0050096 Pstpip2 protein_coding protein_coding MGP_BALBcJ_T0049394.1 MGP_BALBcJ_G0024308.1 mouse_genomes_project 18 34949159 35077409 + MGP_BALBcJ_P0049394 Pcdhga7 protein_coding protein_coding MGP_BALBcJ_T0049395.1 MGP_BALBcJ_G0024308.1 mouse_genomes_project 18 34949213 34952257 + MGP_BALBcJ_P0049395 Pcdhga7 protein_coding protein_coding MGP_BALBcJ_T0001006.1 MGP_BALBcJ_G0000934.1 mouse_genomes_project 18 77844134 77845655 - TEC TEC MGP_BALBcJ_T0050172.1 MGP_BALBcJ_G0024570.1 mouse_genomes_project 18 81666007 81675631 + MGP_BALBcJ_P0050172 Zadh2 protein_coding protein_coding MGP_BALBcJ_T0049518.1 MGP_BALBcJ_G0024349.1 mouse_genomes_project 18 39878074 39879707 - MGP_BALBcJ_P0049518 Gpr151 protein_coding protein_coding MGP_BALBcJ_T0049829.1 MGP_BALBcJ_G0024473.1 mouse_genomes_project 18 62698490 62828300 - MGP_BALBcJ_P0049829 Alpk2 protein_coding protein_coding MGP_BALBcJ_T0049830.1 MGP_BALBcJ_G0024473.1 mouse_genomes_project 18 62707881 62781117 - MGP_BALBcJ_P0049830 Alpk2 protein_coding protein_coding MGP_BALBcJ_T0049831.1 MGP_BALBcJ_G0024473.1 mouse_genomes_project 18 62794648 62828301 - Alpk2 protein_coding processed_transcript MGP_BALBcJ_T0049607.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47269089 47385142 + MGP_BALBcJ_P0049607 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049608.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47269153 47344543 + Tnfaip8 protein_coding processed_transcript MGP_BALBcJ_T0049609.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47269197 47400443 + Tnfaip8 protein_coding processed_transcript MGP_BALBcJ_T0049610.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47313081 47384935 + MGP_BALBcJ_P0049610 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049611.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47324599 47384992 + MGP_BALBcJ_P0049611 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049612.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47324609 47339699 + Tnfaip8 protein_coding processed_transcript MGP_BALBcJ_T0049613.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47324610 47384827 + MGP_BALBcJ_P0049613 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049614.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47340011 47340380 + MGP_BALBcJ_P0049614 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049615.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47344932 47346659 + Tnfaip8 protein_coding retained_intron MGP_BALBcJ_T0049616.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47344940 47384498 + MGP_BALBcJ_P0049616 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049617.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47344943 47384611 + MGP_BALBcJ_P0049617 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049618.1 MGP_BALBcJ_G0024386.1 mouse_genomes_project 18 47346525 47385923 + MGP_BALBcJ_P0049618 Tnfaip8 protein_coding protein_coding MGP_BALBcJ_T0049515.1 MGP_BALBcJ_G0024347.1 mouse_genomes_project 18 39690822 39693528 + MGP_BALBcJ_P0049515 Pou4f3 protein_coding protein_coding MGP_BALBcJ_T0003793.1 MGP_BALBcJ_G0003408.1 mouse_genomes_project 18 34235875 34247672 - Gm10545 antisense antisense MGP_BALBcJ_T0010212.1 MGP_BALBcJ_G0008337.1 mouse_genomes_project 18 5557964 5558068 - Gm26119 miRNA miRNA MGP_BALBcJ_T0049190.1 MGP_BALBcJ_G0024213.1 mouse_genomes_project 18 31861948 31892962 - MGP_BALBcJ_P0049190 Gfra3 protein_coding protein_coding MGP_BALBcJ_T0007004.1 MGP_BALBcJ_G0005754.1 mouse_genomes_project 18 42118877 42122159 + Gm43425 lincRNA lincRNA MGP_BALBcJ_T0049352.1 MGP_BALBcJ_G0024273.1 mouse_genomes_project 18 34247141 34406362 + MGP_BALBcJ_P0049352 Pcdha12 protein_coding protein_coding MGP_BALBcJ_T0098345.1 MGP_BALBcJ_G0036399.1 mouse_genomes_project 18 7019197 7019710 - pseudogene pseudogene MGP_BALBcJ_T0049385.1 MGP_BALBcJ_G0024302.1 mouse_genomes_project 18 34907197 35077409 + MGP_BALBcJ_P0049385 Pcdhga3 protein_coding protein_coding MGP_BALBcJ_T0049058.1 MGP_BALBcJ_G0024159.1 mouse_genomes_project 18 21132451 21142435 + MGP_BALBcJ_P0049058 Zfp397 protein_coding protein_coding MGP_BALBcJ_T0049870.1 MGP_BALBcJ_G0024484.1 mouse_genomes_project 18 64324404 64327146 - MGP_BALBcJ_P0049870 Mc4r protein_coding protein_coding MGP_BALBcJ_T0050137.1 MGP_BALBcJ_G0024561.1 mouse_genomes_project 18 77952681 78014504 - MGP_BALBcJ_P0050137 Ctdp1 protein_coding protein_coding MGP_BALBcJ_T0050138.1 MGP_BALBcJ_G0024561.1 mouse_genomes_project 18 77952687 77985698 - MGP_BALBcJ_P0050138 Ctdp1 protein_coding protein_coding MGP_BALBcJ_T0050139.1 MGP_BALBcJ_G0024561.1 mouse_genomes_project 18 77953458 77985627 - Ctdp1 protein_coding processed_transcript MGP_BALBcJ_T0049021.1 MGP_BALBcJ_G0024146.1 mouse_genomes_project 18 17819189 17819561 - MGP_BALBcJ_P0049021 Gm10269 protein_coding protein_coding MGP_BALBcJ_T0048932.1 MGP_BALBcJ_G0024111.1 mouse_genomes_project 18 7522031 7536410 - MGP_BALBcJ_P0048932 Abhd3 protein_coding protein_coding MGP_BALBcJ_T0048933.1 MGP_BALBcJ_G0024111.1 mouse_genomes_project 18 7522675 7580343 - MGP_BALBcJ_P0048933 Abhd3 protein_coding protein_coding MGP_BALBcJ_T0049108.1 MGP_BALBcJ_G0024179.1 mouse_genomes_project 18 28827808 28829048 + MGP_BALBcJ_P0049108 B930094E09Rik protein_coding protein_coding MGP_BALBcJ_T0049353.1 MGP_BALBcJ_G0024274.1 mouse_genomes_project 18 34308398 34406362 + MGP_BALBcJ_P0049353 Pcdhac1 protein_coding protein_coding MGP_BALBcJ_T0049347.1 MGP_BALBcJ_G0024272.1 mouse_genomes_project 18 34237716 34241039 + Pcdha11 protein_coding retained_intron MGP_BALBcJ_T0049348.1 MGP_BALBcJ_G0024272.1 mouse_genomes_project 18 34237718 34379398 + Pcdha11 protein_coding retained_intron MGP_BALBcJ_T0049349.1 MGP_BALBcJ_G0024272.1 mouse_genomes_project 18 34237756 34406362 + MGP_BALBcJ_P0049349 Pcdha11 protein_coding protein_coding MGP_BALBcJ_T0049350.1 MGP_BALBcJ_G0024272.1 mouse_genomes_project 18 34237836 34406093 + MGP_BALBcJ_P0049350 Pcdha11 protein_coding protein_coding MGP_BALBcJ_T0049351.1 MGP_BALBcJ_G0024272.1 mouse_genomes_project 18 34239256 34403920 + MGP_BALBcJ_P0049351 Pcdha11 protein_coding protein_coding MGP_BALBcJ_T0100856.1 MGP_BALBcJ_G0038892.1 mouse_genomes_project 18 7425688 7425806 - Gm24894 snoRNA snoRNA MGP_BALBcJ_T0013316.1 MGP_BALBcJ_G0011413.1 mouse_genomes_project 18 37998150 37998591 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050011.1 MGP_BALBcJ_G0024521.1 mouse_genomes_project 18 71729298 71741854 - MGP_BALBcJ_P0050011 Ska1 protein_coding protein_coding MGP_BALBcJ_T0050012.1 MGP_BALBcJ_G0024521.1 mouse_genomes_project 18 71729298 71741854 - MGP_BALBcJ_P0050012 Ska1 protein_coding protein_coding MGP_BALBcJ_T0049519.1 MGP_BALBcJ_G0024350.1 mouse_genomes_project 18 39937525 40206138 - Ppp2r2b protein_coding processed_transcript MGP_BALBcJ_T0049520.1 MGP_BALBcJ_G0024350.1 mouse_genomes_project 18 39945147 40205929 - MGP_BALBcJ_P0049520 Ppp2r2b protein_coding protein_coding MGP_BALBcJ_T0049521.1 MGP_BALBcJ_G0024350.1 mouse_genomes_project 18 39945147 40363440 - MGP_BALBcJ_P0049521 Ppp2r2b protein_coding protein_coding MGP_BALBcJ_T0049522.1 MGP_BALBcJ_G0024350.1 mouse_genomes_project 18 39945172 40206278 - MGP_BALBcJ_P0049522 Ppp2r2b protein_coding protein_coding MGP_BALBcJ_T0049523.1 MGP_BALBcJ_G0024350.1 mouse_genomes_project 18 40040444 40248339 - Ppp2r2b protein_coding processed_transcript MGP_BALBcJ_T0049524.1 MGP_BALBcJ_G0024350.1 mouse_genomes_project 18 40060977 40205450 - Ppp2r2b protein_coding processed_transcript MGP_BALBcJ_T0049191.1 MGP_BALBcJ_G0024214.1 mouse_genomes_project 18 31907153 31926094 - MGP_BALBcJ_P0049191 Cdc25c protein_coding protein_coding MGP_BALBcJ_T0003782.1 MGP_BALBcJ_G0003400.1 mouse_genomes_project 18 13721643 13722589 + Gm15485 antisense antisense MGP_BALBcJ_T0049884.1 MGP_BALBcJ_G0024496.1 mouse_genomes_project 18 65169606 65232104 - MGP_BALBcJ_P0049884 Ptpn2 protein_coding protein_coding MGP_BALBcJ_T0049885.1 MGP_BALBcJ_G0024496.1 mouse_genomes_project 18 65169607 65232119 - MGP_BALBcJ_P0049885 Ptpn2 protein_coding protein_coding MGP_BALBcJ_T0049886.1 MGP_BALBcJ_G0024496.1 mouse_genomes_project 18 65175328 65232126 - MGP_BALBcJ_P0049886 Ptpn2 protein_coding protein_coding MGP_BALBcJ_T0049887.1 MGP_BALBcJ_G0024496.1 mouse_genomes_project 18 65182168 65197266 - Ptpn2 protein_coding processed_transcript MGP_BALBcJ_T0050031.1 MGP_BALBcJ_G0024527.1 mouse_genomes_project 18 72496793 72520324 - MGP_BALBcJ_P0050031 Lipg protein_coding protein_coding MGP_BALBcJ_T0049356.1 MGP_BALBcJ_G0024277.1 mouse_genomes_project 18 34511284 34514098 + MGP_BALBcJ_P0049356 Pcdhb2 protein_coding protein_coding MGP_BALBcJ_T0049357.1 MGP_BALBcJ_G0024277.1 mouse_genomes_project 18 34511312 34512894 + MGP_BALBcJ_P0049357 Pcdhb2 protein_coding protein_coding MGP_BALBcJ_T0049772.1 MGP_BALBcJ_G0024448.1 mouse_genomes_project 18 59070864 59075760 + MGP_BALBcJ_P0049772 Il17b protein_coding protein_coding MGP_BALBcJ_T0048934.1 MGP_BALBcJ_G0024112.1 mouse_genomes_project 18 7599593 7694016 + MGP_BALBcJ_P0048934 Mib1 protein_coding protein_coding MGP_BALBcJ_T0048935.1 MGP_BALBcJ_G0024112.1 mouse_genomes_project 18 7599700 7687546 + MGP_BALBcJ_P0048935 Mib1 protein_coding protein_coding MGP_BALBcJ_T0048936.1 MGP_BALBcJ_G0024112.1 mouse_genomes_project 18 7599789 7630625 + Mib1 protein_coding retained_intron MGP_BALBcJ_T0048937.1 MGP_BALBcJ_G0024112.1 mouse_genomes_project 18 7635706 7694142 + MGP_BALBcJ_P0048937 Mib1 protein_coding protein_coding MGP_BALBcJ_T0048938.1 MGP_BALBcJ_G0024112.1 mouse_genomes_project 18 7673253 7693066 + MGP_BALBcJ_P0048938 Mib1 protein_coding protein_coding MGP_BALBcJ_T0010221.1 MGP_BALBcJ_G0008346.1 mouse_genomes_project 18 30090983 30091084 - Mir6361 miRNA miRNA MGP_BALBcJ_T0049181.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31802287 31823070 - MGP_BALBcJ_P0049181 Cdc23 protein_coding protein_coding MGP_BALBcJ_T0049182.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31803024 31823070 - MGP_BALBcJ_P0049182 Cdc23 protein_coding protein_coding MGP_BALBcJ_T0049183.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31805012 31805965 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049184.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31807153 31823053 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049185.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31807156 31808189 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049186.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31808155 31808981 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049187.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31812244 31816655 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049188.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31818188 31823053 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049189.1 MGP_BALBcJ_G0024212.1 mouse_genomes_project 18 31819039 31823057 - Cdc23 protein_coding retained_intron MGP_BALBcJ_T0049396.1 MGP_BALBcJ_G0024309.1 mouse_genomes_project 18 34954681 35077406 + MGP_BALBcJ_P0049396 Pcdhgb4 protein_coding protein_coding MGP_BALBcJ_T0049397.1 MGP_BALBcJ_G0024309.1 mouse_genomes_project 18 34954695 34963672 + Pcdhgb4 protein_coding processed_transcript MGP_BALBcJ_T0001005.1 MGP_BALBcJ_G0000933.1 mouse_genomes_project 18 63037023 63038283 + TEC TEC MGP_BALBcJ_T0098556.1 MGP_BALBcJ_G0036610.1 mouse_genomes_project 18 67078946 67079055 + Gm24845 rRNA rRNA MGP_BALBcJ_T0048890.1 MGP_BALBcJ_G0024097.1 mouse_genomes_project 18 4197520 4475539 - MGP_BALBcJ_P0048890 Mpp7 protein_coding protein_coding MGP_BALBcJ_T0050168.1 MGP_BALBcJ_G0024568.1 mouse_genomes_project 18 80494928 80589770 + MGP_BALBcJ_P0050168 Zfp516 protein_coding protein_coding MGP_BALBcJ_T0050169.1 MGP_BALBcJ_G0024568.1 mouse_genomes_project 18 80498566 80589770 + MGP_BALBcJ_P0050169 Zfp516 protein_coding protein_coding MGP_BALBcJ_T0049125.1 MGP_BALBcJ_G0024192.1 mouse_genomes_project 18 29459472 29489224 + MGP_BALBcJ_P0049125 protein_coding protein_coding MGP_BALBcJ_T0049126.1 MGP_BALBcJ_G0024192.1 mouse_genomes_project 18 29459526 29489224 + protein_coding retained_intron MGP_BALBcJ_T0049127.1 MGP_BALBcJ_G0024192.1 mouse_genomes_project 18 29476341 29489164 + protein_coding processed_transcript MGP_BALBcJ_T0049033.1 MGP_BALBcJ_G0024154.1 mouse_genomes_project 18 19004109 19369105 - MGP_BALBcJ_P0049033 Ccdc178 protein_coding protein_coding MGP_BALBcJ_T0049034.1 MGP_BALBcJ_G0024154.1 mouse_genomes_project 18 19004510 19364188 - MGP_BALBcJ_P0049034 Ccdc178 protein_coding protein_coding MGP_BALBcJ_T0102369.1 MGP_BALBcJ_G0040185.1 mouse_genomes_project 18 40065 41877 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0049372.1 MGP_BALBcJ_G0024290.1 mouse_genomes_project 18 34694298 34697099 + MGP_BALBcJ_P0049372 Pcdhb15 protein_coding protein_coding MGP_BALBcJ_T0006982.1 MGP_BALBcJ_G0005739.1 mouse_genomes_project 18 13810900 13817277 + Gm15328 lincRNA lincRNA MGP_BALBcJ_T0013322.1 MGP_BALBcJ_G0011419.1 mouse_genomes_project 18 44698458 44699882 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049752.1 MGP_BALBcJ_G0024443.1 mouse_genomes_project 18 58572101 58591220 - MGP_BALBcJ_P0049752 Slc26a2 protein_coding protein_coding MGP_BALBcJ_T0049753.1 MGP_BALBcJ_G0024443.1 mouse_genomes_project 18 58576326 58579986 - MGP_BALBcJ_P0049753 Slc26a2 protein_coding protein_coding MGP_BALBcJ_T0049754.1 MGP_BALBcJ_G0024443.1 mouse_genomes_project 18 58581321 58590988 - MGP_BALBcJ_P0049754 Slc26a2 protein_coding protein_coding MGP_BALBcJ_T0049755.1 MGP_BALBcJ_G0024443.1 mouse_genomes_project 18 58586794 58590965 - Slc26a2 protein_coding retained_intron MGP_BALBcJ_T0049634.1 MGP_BALBcJ_G0024397.1 mouse_genomes_project 18 50013259 50015249 + MGP_BALBcJ_P0049634 Gykl1 protein_coding protein_coding MGP_BALBcJ_T0050182.1 MGP_BALBcJ_G0024573.1 mouse_genomes_project 18 82253012 82271346 - MGP_BALBcJ_P0050182 Cndp2 protein_coding protein_coding MGP_BALBcJ_T0050183.1 MGP_BALBcJ_G0024573.1 mouse_genomes_project 18 82253012 82267709 - MGP_BALBcJ_P0050183 Cndp2 protein_coding protein_coding MGP_BALBcJ_T0000999.1 MGP_BALBcJ_G0000927.1 mouse_genomes_project 18 43388894 43389498 - TEC TEC MGP_BALBcJ_T0049871.1 MGP_BALBcJ_G0024485.1 mouse_genomes_project 18 64567906 64711749 + MGP_BALBcJ_P0049871 Gnal protein_coding protein_coding MGP_BALBcJ_T0049872.1 MGP_BALBcJ_G0024485.1 mouse_genomes_project 18 64616893 64711749 + MGP_BALBcJ_P0049872 Gnal protein_coding protein_coding MGP_BALBcJ_T0049330.1 MGP_BALBcJ_G0024260.1 mouse_genomes_project 18 34149354 34406366 + MGP_BALBcJ_P0049330 Pcdha1 protein_coding protein_coding MGP_BALBcJ_T0049331.1 MGP_BALBcJ_G0024260.1 mouse_genomes_project 18 34149455 34406362 + MGP_BALBcJ_P0049331 Pcdha1 protein_coding protein_coding MGP_BALBcJ_T0010249.1 MGP_BALBcJ_G0008374.1 mouse_genomes_project 18 66265876 66265978 + Mir6356 miRNA miRNA MGP_BALBcJ_T0050099.1 MGP_BALBcJ_G0024549.1 mouse_genomes_project 18 75635859 75659187 - MGP_BALBcJ_P0050099 Slc14a1 protein_coding protein_coding MGP_BALBcJ_T0050100.1 MGP_BALBcJ_G0024549.1 mouse_genomes_project 18 75637417 75677708 - MGP_BALBcJ_P0050100 Slc14a1 protein_coding protein_coding MGP_BALBcJ_T0050101.1 MGP_BALBcJ_G0024549.1 mouse_genomes_project 18 75637417 75659092 - MGP_BALBcJ_P0050101 Slc14a1 protein_coding protein_coding MGP_BALBcJ_T0099609.1 MGP_BALBcJ_G0037645.1 mouse_genomes_project 18 46866640 46866794 - Gm25440 snRNA snRNA MGP_BALBcJ_T0100883.1 MGP_BALBcJ_G0038919.1 mouse_genomes_project 18 72563328 72563393 + Gm23301 snoRNA snoRNA MGP_BALBcJ_T0049343.1 MGP_BALBcJ_G0024268.1 mouse_genomes_project 18 34201069 35068811 + MGP_BALBcJ_P0049343 Gm37388 protein_coding protein_coding MGP_BALBcJ_T0013332.1 MGP_BALBcJ_G0011429.1 mouse_genomes_project 18 53302701 53303707 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049979.1 MGP_BALBcJ_G0024511.1 mouse_genomes_project 18 68043686 68058929 - MGP_BALBcJ_P0049979 Poli protein_coding protein_coding MGP_BALBcJ_T0049980.1 MGP_BALBcJ_G0024511.1 mouse_genomes_project 18 68043689 68059413 - MGP_BALBcJ_P0049980 Poli protein_coding protein_coding MGP_BALBcJ_T0049981.1 MGP_BALBcJ_G0024511.1 mouse_genomes_project 18 68043690 68059225 - MGP_BALBcJ_P0049981 Poli protein_coding protein_coding MGP_BALBcJ_T0049982.1 MGP_BALBcJ_G0024511.1 mouse_genomes_project 18 68043691 68058929 - MGP_BALBcJ_P0049982 Poli protein_coding protein_coding MGP_BALBcJ_T0049983.1 MGP_BALBcJ_G0024511.1 mouse_genomes_project 18 68043693 68059059 - MGP_BALBcJ_P0049983 Poli protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049492.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36678401 36758680 - MGP_BALBcJ_P0049492 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049493.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36678403 36755323 - MGP_BALBcJ_P0049493 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049494.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36679844 36757908 - MGP_BALBcJ_P0049494 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049495.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36682339 36755310 - MGP_BALBcJ_P0049495 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049496.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36692286 36757950 - MGP_BALBcJ_P0049496 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049497.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36754948 36759152 - MGP_BALBcJ_P0049497 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049498.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36755163 36757345 - MGP_BALBcJ_P0049498 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0049499.1 MGP_BALBcJ_G0024335.1 mouse_genomes_project 18 36755237 36759150 - MGP_BALBcJ_P0049499 Nr3c1 protein_coding protein_coding MGP_BALBcJ_T0003809.1 MGP_BALBcJ_G0003422.1 mouse_genomes_project 18 59074265 59075607 - Gm38165 antisense antisense MGP_BALBcJ_T0050146.1 MGP_BALBcJ_G0024564.1 mouse_genomes_project 18 78504906 78525391 - MGP_BALBcJ_P0050146 Sall3 protein_coding protein_coding MGP_BALBcJ_T0099624.1 MGP_BALBcJ_G0037660.1 mouse_genomes_project 18 76185460 76185620 + Gm23895 snRNA snRNA MGP_BALBcJ_T0000996.1 MGP_BALBcJ_G0000924.1 mouse_genomes_project 18 5790264 5791856 + TEC TEC MGP_BALBcJ_T0100857.1 MGP_BALBcJ_G0038893.1 mouse_genomes_project 18 7632443 7632565 + Gm25116 snoRNA snoRNA MGP_BALBcJ_T0049393.1 MGP_BALBcJ_G0024307.1 mouse_genomes_project 18 34941524 35077409 + MGP_BALBcJ_P0049393 Pcdhga6 protein_coding protein_coding MGP_BALBcJ_T0099606.1 MGP_BALBcJ_G0037642.1 mouse_genomes_project 18 40374142 40374249 - Gm22264 snRNA snRNA MGP_BALBcJ_T0049512.1 MGP_BALBcJ_G0024345.1 mouse_genomes_project 18 39496920 39557698 - MGP_BALBcJ_P0049512 Lars protein_coding protein_coding MGP_BALBcJ_T0013341.1 MGP_BALBcJ_G0011438.1 mouse_genomes_project 18 82243803 82245388 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049461.1 MGP_BALBcJ_G0024329.1 mouse_genomes_project 18 35541441 35562185 + MGP_BALBcJ_P0049461 Rnf14 protein_coding protein_coding MGP_BALBcJ_T0003804.1 MGP_BALBcJ_G0003419.1 mouse_genomes_project 18 41955253 41969734 + A930012L18Rik antisense antisense MGP_BALBcJ_T0003805.1 MGP_BALBcJ_G0003419.1 mouse_genomes_project 18 41955691 41966035 + A930012L18Rik antisense antisense MGP_BALBcJ_T0050144.1 MGP_BALBcJ_G0024563.1 mouse_genomes_project 18 78275702 78472588 - MGP_BALBcJ_P0050144 Atp9b protein_coding protein_coding MGP_BALBcJ_T0050145.1 MGP_BALBcJ_G0024563.1 mouse_genomes_project 18 78275943 78472469 - MGP_BALBcJ_P0050145 Atp9b protein_coding unknown_likely_coding MGP_BALBcJ_T0050173.1 MGP_BALBcJ_G0024571.1 mouse_genomes_project 18 81706244 82146575 - MGP_BALBcJ_P0050173 Zfp407 protein_coding protein_coding MGP_BALBcJ_T0050174.1 MGP_BALBcJ_G0024571.1 mouse_genomes_project 18 81788258 82176888 - MGP_BALBcJ_P0050174 Zfp407 protein_coding protein_coding MGP_BALBcJ_T0050175.1 MGP_BALBcJ_G0024571.1 mouse_genomes_project 18 81861746 81995513 - Zfp407 protein_coding processed_transcript MGP_BALBcJ_T0050176.1 MGP_BALBcJ_G0024571.1 mouse_genomes_project 18 82013068 82018017 - Zfp407 protein_coding retained_intron MGP_BALBcJ_T0050177.1 MGP_BALBcJ_G0024571.1 mouse_genomes_project 18 82079414 82146525 - Zfp407 protein_coding processed_transcript MGP_BALBcJ_T0050178.1 MGP_BALBcJ_G0024571.1 mouse_genomes_project 18 82141060 82177109 - Zfp407 protein_coding processed_transcript MGP_BALBcJ_T0013345.1 MGP_BALBcJ_G0011442.1 mouse_genomes_project 18 87882720 87883182 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049165.1 MGP_BALBcJ_G0024208.1 mouse_genomes_project 18 31733034 31749420 - MGP_BALBcJ_P0049165 Nme5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049166.1 MGP_BALBcJ_G0024208.1 mouse_genomes_project 18 31733036 31749435 - MGP_BALBcJ_P0049166 Nme5 protein_coding protein_coding MGP_BALBcJ_T0049167.1 MGP_BALBcJ_G0024208.1 mouse_genomes_project 18 31733084 31749407 - MGP_BALBcJ_P0049167 Nme5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049168.1 MGP_BALBcJ_G0024208.1 mouse_genomes_project 18 31737613 31749403 - MGP_BALBcJ_P0049168 Nme5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049419.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35079128 35170988 - MGP_BALBcJ_P0049419 Diaph1 protein_coding unknown_likely_coding MGP_BALBcJ_T0049420.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35079136 35171146 - MGP_BALBcJ_P0049420 Diaph1 protein_coding protein_coding MGP_BALBcJ_T0049421.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35079138 35171051 - MGP_BALBcJ_P0049421 Diaph1 protein_coding protein_coding MGP_BALBcJ_T0049422.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35079138 35171093 - MGP_BALBcJ_P0049422 Diaph1 protein_coding protein_coding MGP_BALBcJ_T0049423.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35079140 35141861 - MGP_BALBcJ_P0049423 Diaph1 protein_coding protein_coding MGP_BALBcJ_T0049424.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35080359 35171081 - MGP_BALBcJ_P0049424 Diaph1 protein_coding protein_coding MGP_BALBcJ_T0049425.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35080635 35088948 - Diaph1 protein_coding processed_transcript MGP_BALBcJ_T0049426.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35089981 35170988 - MGP_BALBcJ_P0049426 Diaph1 protein_coding unknown_likely_coding MGP_BALBcJ_T0049427.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35091025 35091685 - Diaph1 protein_coding retained_intron MGP_BALBcJ_T0049428.1 MGP_BALBcJ_G0024321.1 mouse_genomes_project 18 35131689 35133475 - Diaph1 protein_coding retained_intron MGP_BALBcJ_T0049631.1 MGP_BALBcJ_G0024395.1 mouse_genomes_project 18 49934767 49958507 + MGP_BALBcJ_P0049631 Zfp474 protein_coding protein_coding MGP_BALBcJ_T0049014.1 MGP_BALBcJ_G0024141.1 mouse_genomes_project 18 17326521 17426474 + MGP_BALBcJ_P0049014 protein_coding protein_coding MGP_BALBcJ_T0006987.1 MGP_BALBcJ_G0005741.1 mouse_genomes_project 18 28659011 28667781 + Gm26658 lincRNA lincRNA MGP_BALBcJ_T0049780.1 MGP_BALBcJ_G0024452.1 mouse_genomes_project 18 59192352 59309002 - MGP_BALBcJ_P0049780 Ablim3 protein_coding protein_coding MGP_BALBcJ_T0049781.1 MGP_BALBcJ_G0024452.1 mouse_genomes_project 18 59192352 59309030 - MGP_BALBcJ_P0049781 Ablim3 protein_coding protein_coding MGP_BALBcJ_T0049992.1 MGP_BALBcJ_G0024514.1 mouse_genomes_project 18 71105997 71126085 + MGP_BALBcJ_P0049992 Mex3c protein_coding protein_coding MGP_BALBcJ_T0006977.1 MGP_BALBcJ_G0005735.1 mouse_genomes_project 18 2030102 2032954 - Gm26682 lincRNA lincRNA MGP_BALBcJ_T0049359.1 MGP_BALBcJ_G0024279.1 mouse_genomes_project 18 34523829 34527545 + MGP_BALBcJ_P0049359 Pcdhb4 protein_coding protein_coding MGP_BALBcJ_T0049689.1 MGP_BALBcJ_G0024421.1 mouse_genomes_project 18 56192521 56399551 + MGP_BALBcJ_P0049689 Adamts19 protein_coding protein_coding MGP_BALBcJ_T0013320.1 MGP_BALBcJ_G0011417.1 mouse_genomes_project 18 43741832 43742408 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049834.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63013176 63124579 + MGP_BALBcJ_P0049834 protein_coding protein_coding MGP_BALBcJ_T0049835.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63014039 63056417 + MGP_BALBcJ_P0049835 protein_coding protein_coding MGP_BALBcJ_T0049836.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63014687 63058451 + MGP_BALBcJ_P0049836 protein_coding protein_coding MGP_BALBcJ_T0049837.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63015231 63056424 + MGP_BALBcJ_P0049837 protein_coding protein_coding MGP_BALBcJ_T0049838.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63015355 63124077 + MGP_BALBcJ_P0049838 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049839.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63015464 63124076 + MGP_BALBcJ_P0049839 protein_coding protein_coding MGP_BALBcJ_T0049840.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63015876 63124070 + MGP_BALBcJ_P0049840 protein_coding protein_coding MGP_BALBcJ_T0049841.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63052723 63058043 + protein_coding retained_intron MGP_BALBcJ_T0049842.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63058356 63118127 + protein_coding retained_intron MGP_BALBcJ_T0049843.1 MGP_BALBcJ_G0024475.1 mouse_genomes_project 18 63079696 63120770 + protein_coding processed_transcript MGP_BALBcJ_T0050082.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75017738 75129562 - MGP_BALBcJ_P0050082 Rnf165 protein_coding protein_coding MGP_BALBcJ_T0050083.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75024047 75051702 - MGP_BALBcJ_P0050083 Rnf165 protein_coding protein_coding MGP_BALBcJ_T0050084.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75024610 75029319 - Rnf165 protein_coding retained_intron MGP_BALBcJ_T0050085.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75028907 75129476 - MGP_BALBcJ_P0050085 Rnf165 protein_coding protein_coding MGP_BALBcJ_T0050086.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75030499 75067479 - Rnf165 protein_coding processed_transcript MGP_BALBcJ_T0050087.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75126528 75129043 - Rnf165 protein_coding retained_intron MGP_BALBcJ_T0050088.1 MGP_BALBcJ_G0024542.1 mouse_genomes_project 18 75127565 75129531 - MGP_BALBcJ_P0050088 Rnf165 protein_coding protein_coding MGP_BALBcJ_T0049382.1 MGP_BALBcJ_G0024300.1 mouse_genomes_project 18 34894902 35077409 + MGP_BALBcJ_P0049382 Pcdhga1 protein_coding protein_coding MGP_BALBcJ_T0049383.1 MGP_BALBcJ_G0024300.1 mouse_genomes_project 18 34894902 34898149 + MGP_BALBcJ_P0049383 Pcdhga1 protein_coding protein_coding MGP_BALBcJ_T0048989.1 MGP_BALBcJ_G0024126.1 mouse_genomes_project 18 9976993 9992810 + MGP_BALBcJ_P0048989 Hrh4 protein_coding protein_coding MGP_BALBcJ_T0049163.1 MGP_BALBcJ_G0024206.1 mouse_genomes_project 18 31615053 31679607 - MGP_BALBcJ_P0049163 Fam13b protein_coding protein_coding MGP_BALBcJ_T0049548.1 MGP_BALBcJ_G0024364.1 mouse_genomes_project 18 41510528 41515259 + MGP_BALBcJ_P0049548 Gm10542 protein_coding protein_coding MGP_BALBcJ_T0049847.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63233692 63251022 + MGP_BALBcJ_P0049847 Sec11c protein_coding protein_coding MGP_BALBcJ_T0049848.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63233693 63251013 + MGP_BALBcJ_P0049848 Sec11c protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049849.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63233715 63246085 + MGP_BALBcJ_P0049849 Sec11c protein_coding protein_coding MGP_BALBcJ_T0049850.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63233746 63251014 + Sec11c protein_coding retained_intron MGP_BALBcJ_T0049851.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63234445 63246135 + Sec11c protein_coding processed_transcript MGP_BALBcJ_T0049852.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63239933 63251017 + Sec11c protein_coding processed_transcript MGP_BALBcJ_T0049853.1 MGP_BALBcJ_G0024477.1 mouse_genomes_project 18 63247370 63251017 + Sec11c protein_coding processed_transcript MGP_BALBcJ_T0049890.1 MGP_BALBcJ_G0024498.1 mouse_genomes_project 18 65307957 65398418 + MGP_BALBcJ_P0049890 Cep192 protein_coding protein_coding MGP_BALBcJ_T0099610.1 MGP_BALBcJ_G0037646.1 mouse_genomes_project 18 48558973 48559080 - Gm25739 snRNA snRNA MGP_BALBcJ_T0007012.1 MGP_BALBcJ_G0005761.1 mouse_genomes_project 18 59020622 59028395 + Bvht lincRNA lincRNA MGP_BALBcJ_T0007013.1 MGP_BALBcJ_G0005761.1 mouse_genomes_project 18 59020733 59028575 + Bvht lincRNA lincRNA MGP_BALBcJ_T0049332.1 MGP_BALBcJ_G0024261.1 mouse_genomes_project 18 34158374 34406362 + MGP_BALBcJ_P0049332 Pcdha2 protein_coding protein_coding MGP_BALBcJ_T0049333.1 MGP_BALBcJ_G0024261.1 mouse_genomes_project 18 34158393 34406093 + MGP_BALBcJ_P0049333 Pcdha2 protein_coding protein_coding MGP_BALBcJ_T0049542.1 MGP_BALBcJ_G0024360.1 mouse_genomes_project 18 41410058 41414166 + MGP_BALBcJ_P0049542 Spink12 protein_coding protein_coding MGP_BALBcJ_T0049171.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31769508 31795931 - MGP_BALBcJ_P0049171 Brd8 protein_coding unknown_likely_coding MGP_BALBcJ_T0049172.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31769514 31795940 - MGP_BALBcJ_P0049172 Brd8 protein_coding protein_coding MGP_BALBcJ_T0049173.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31769514 31795940 - MGP_BALBcJ_P0049173 Brd8 protein_coding protein_coding MGP_BALBcJ_T0049174.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31770514 31795892 - Brd8 protein_coding retained_intron MGP_BALBcJ_T0049175.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31770543 31795940 - MGP_BALBcJ_P0049175 Brd8 protein_coding protein_coding MGP_BALBcJ_T0049176.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31771859 31795940 - MGP_BALBcJ_P0049176 Brd8 protein_coding protein_coding MGP_BALBcJ_T0049177.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31781533 31795940 - Brd8 protein_coding retained_intron MGP_BALBcJ_T0049178.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31782482 31795893 - Brd8 protein_coding processed_transcript MGP_BALBcJ_T0049179.1 MGP_BALBcJ_G0024210.1 mouse_genomes_project 18 31793252 31795940 - Brd8 protein_coding retained_intron MGP_BALBcJ_T0048961.1 MGP_BALBcJ_G0024120.1 mouse_genomes_project 18 9201902 9259928 - MGP_BALBcJ_P0048961 Ankrd29 protein_coding protein_coding MGP_BALBcJ_T0048962.1 MGP_BALBcJ_G0024120.1 mouse_genomes_project 18 9201905 9225764 - Ankrd29 protein_coding processed_transcript MGP_BALBcJ_T0048963.1 MGP_BALBcJ_G0024120.1 mouse_genomes_project 18 9204145 9259855 - MGP_BALBcJ_P0048963 Ankrd29 protein_coding protein_coding MGP_BALBcJ_T0048964.1 MGP_BALBcJ_G0024120.1 mouse_genomes_project 18 9229830 9259937 - MGP_BALBcJ_P0048964 Ankrd29 protein_coding protein_coding MGP_BALBcJ_T0049384.1 MGP_BALBcJ_G0024301.1 mouse_genomes_project 18 34901710 35077406 + MGP_BALBcJ_P0049384 Pcdhga2 protein_coding protein_coding MGP_BALBcJ_T0006981.1 MGP_BALBcJ_G0005738.1 mouse_genomes_project 18 8766069 8784610 - Gm6277 lincRNA lincRNA MGP_BALBcJ_T0049094.1 MGP_BALBcJ_G0024174.1 mouse_genomes_project 18 22691790 22968796 - MGP_BALBcJ_P0049094 Celf4 protein_coding unknown_likely_coding MGP_BALBcJ_T0049095.1 MGP_BALBcJ_G0024174.1 mouse_genomes_project 18 22691790 22752110 - MGP_BALBcJ_P0049095 Celf4 protein_coding unknown_likely_coding MGP_BALBcJ_T0049096.1 MGP_BALBcJ_G0024174.1 mouse_genomes_project 18 22691803 22969248 - MGP_BALBcJ_P0049096 Celf4 protein_coding protein_coding MGP_BALBcJ_T0049097.1 MGP_BALBcJ_G0024174.1 mouse_genomes_project 18 22691803 22969248 - MGP_BALBcJ_P0049097 Celf4 protein_coding protein_coding MGP_BALBcJ_T0101658.1 MGP_BALBcJ_G0039655.1 mouse_genomes_project 18 34885522 34885997 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101659.1 MGP_BALBcJ_G0039655.1 mouse_genomes_project 18 34885842 34887262 - transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0049588.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44518760 44566191 - MGP_BALBcJ_P0049588 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049589.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44528407 44653617 - MGP_BALBcJ_P0049589 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049590.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44528408 44653655 - MGP_BALBcJ_P0049590 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049591.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44531580 44653233 - MGP_BALBcJ_P0049591 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049592.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44531582 44653235 - MGP_BALBcJ_P0049592 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049593.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44532516 44616945 - MGP_BALBcJ_P0049593 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049594.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44560641 44653655 - Sema6a protein_coding retained_intron MGP_BALBcJ_T0049595.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44560656 44653657 - Sema6a protein_coding retained_intron MGP_BALBcJ_T0049596.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44575547 44616923 - MGP_BALBcJ_P0049596 Sema6a protein_coding protein_coding MGP_BALBcJ_T0049597.1 MGP_BALBcJ_G0024383.1 mouse_genomes_project 18 44587338 44653055 - Sema6a protein_coding retained_intron MGP_BALBcJ_T0049027.1 MGP_BALBcJ_G0024150.1 mouse_genomes_project 18 18187446 18214244 + MGP_BALBcJ_P0049027 Rnf138 protein_coding protein_coding MGP_BALBcJ_T0049028.1 MGP_BALBcJ_G0024150.1 mouse_genomes_project 18 18187446 18214244 + MGP_BALBcJ_P0049028 Rnf138 protein_coding protein_coding MGP_BALBcJ_T0050062.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74532332 74603383 - MGP_BALBcJ_P0050062 Katnal2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050063.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74532332 74603426 - MGP_BALBcJ_P0050063 Katnal2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050064.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74532569 74603364 - MGP_BALBcJ_P0050064 Katnal2 protein_coding protein_coding MGP_BALBcJ_T0050065.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74533644 74562367 - Katnal2 protein_coding processed_transcript MGP_BALBcJ_T0050066.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74548693 74603436 - MGP_BALBcJ_P0050066 Katnal2 protein_coding protein_coding MGP_BALBcJ_T0050067.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74557187 74567526 - Katnal2 protein_coding processed_transcript MGP_BALBcJ_T0050068.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74558035 74563697 - Katnal2 protein_coding retained_intron MGP_BALBcJ_T0050069.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74565535 74603427 - MGP_BALBcJ_P0050069 Katnal2 protein_coding protein_coding MGP_BALBcJ_T0050070.1 MGP_BALBcJ_G0024537.1 mouse_genomes_project 18 74566027 74603438 - MGP_BALBcJ_P0050070 Katnal2 protein_coding protein_coding MGP_BALBcJ_T0003822.1 MGP_BALBcJ_G0003429.1 mouse_genomes_project 18 78526297 78527417 + Gm27239 antisense antisense MGP_BALBcJ_T0049891.1 MGP_BALBcJ_G0024499.1 mouse_genomes_project 18 65451530 65784075 + MGP_BALBcJ_P0049891 Ldlrad4 protein_coding protein_coding MGP_BALBcJ_T0049401.1 MGP_BALBcJ_G0024312.1 mouse_genomes_project 18 34971234 35077406 + MGP_BALBcJ_P0049401 Pcdhga9 protein_coding protein_coding MGP_BALBcJ_T0049402.1 MGP_BALBcJ_G0024312.1 mouse_genomes_project 18 34971673 34974711 + Pcdhga9 protein_coding retained_intron MGP_BALBcJ_T0050197.1 MGP_BALBcJ_G0024579.1 mouse_genomes_project 18 84294773 84301947 + MGP_BALBcJ_P0050197 Cbln2 protein_coding protein_coding MGP_BALBcJ_T0050198.1 MGP_BALBcJ_G0024579.1 mouse_genomes_project 18 84295183 84301253 + MGP_BALBcJ_P0050198 Cbln2 protein_coding protein_coding MGP_BALBcJ_T0050199.1 MGP_BALBcJ_G0024579.1 mouse_genomes_project 18 84295728 84301945 + MGP_BALBcJ_P0050199 Cbln2 protein_coding protein_coding MGP_BALBcJ_T0050200.1 MGP_BALBcJ_G0024579.1 mouse_genomes_project 18 84296711 84301947 + MGP_BALBcJ_P0050200 Cbln2 protein_coding protein_coding MGP_BALBcJ_T0100876.1 MGP_BALBcJ_G0038912.1 mouse_genomes_project 18 53536269 53536404 + Gm23555 snoRNA snoRNA MGP_BALBcJ_T0100866.1 MGP_BALBcJ_G0038902.1 mouse_genomes_project 18 30952605 30952737 + Gm23639 snoRNA snoRNA MGP_BALBcJ_T0013294.1 MGP_BALBcJ_G0011391.1 mouse_genomes_project 18 9701717 9702924 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049207.1 MGP_BALBcJ_G0024223.1 mouse_genomes_project 18 32394753 32400767 - MGP_BALBcJ_P0049207 Lrrtm2 protein_coding protein_coding MGP_BALBcJ_T0100859.1 MGP_BALBcJ_G0038895.1 mouse_genomes_project 18 14024712 14024842 + Gm22470 snoRNA snoRNA MGP_BALBcJ_T0049793.1 MGP_BALBcJ_G0024461.1 mouse_genomes_project 18 60050199 60051020 + MGP_BALBcJ_P0049793 Gm17732 protein_coding protein_coding MGP_BALBcJ_T0099620.1 MGP_BALBcJ_G0037656.1 mouse_genomes_project 18 62154477 62154539 + Gm23016 snRNA snRNA MGP_BALBcJ_T0010222.1 MGP_BALBcJ_G0008347.1 mouse_genomes_project 18 32741983 32742053 + Mir1949 miRNA miRNA MGP_BALBcJ_T0098346.1 MGP_BALBcJ_G0036400.1 mouse_genomes_project 18 57787838 57788481 + pseudogene pseudogene MGP_BALBcJ_T0050105.1 MGP_BALBcJ_G0024552.1 mouse_genomes_project 18 77575015 77648878 + MGP_BALBcJ_P0050105 Pard6g protein_coding protein_coding MGP_BALBcJ_T0011432.1 MGP_BALBcJ_G0009557.1 mouse_genomes_project 18 34025864 34026007 + Vaultrc5 misc_RNA misc_RNA MGP_BALBcJ_T0017585.1 MGP_BALBcJ_G0015300.1 mouse_genomes_project 18 35059398 35075736 + Gm38182 processed_transcript processed_transcript MGP_BALBcJ_T0017586.1 MGP_BALBcJ_G0015300.1 mouse_genomes_project 18 35059667 35075594 + Gm38182 processed_transcript processed_transcript MGP_BALBcJ_T0017587.1 MGP_BALBcJ_G0015300.1 mouse_genomes_project 18 35059878 35075915 + Gm38182 processed_transcript processed_transcript MGP_BALBcJ_T0017588.1 MGP_BALBcJ_G0015300.1 mouse_genomes_project 18 35059963 35075918 + Gm38182 processed_transcript processed_transcript MGP_BALBcJ_T0017589.1 MGP_BALBcJ_G0015300.1 mouse_genomes_project 18 35060257 35075916 + Gm38182 processed_transcript processed_transcript MGP_BALBcJ_T0048977.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9715143 9909532 - MGP_BALBcJ_P0048977 Osbpl1a protein_coding protein_coding MGP_BALBcJ_T0048978.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9716034 9864193 - MGP_BALBcJ_P0048978 Osbpl1a protein_coding protein_coding MGP_BALBcJ_T0048979.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9722796 9727377 - Osbpl1a protein_coding retained_intron MGP_BALBcJ_T0048980.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9727042 9828048 - MGP_BALBcJ_P0048980 Osbpl1a protein_coding protein_coding MGP_BALBcJ_T0048981.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9728705 9853803 - Osbpl1a protein_coding retained_intron MGP_BALBcJ_T0048982.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9731538 9833861 - MGP_BALBcJ_P0048982 Osbpl1a protein_coding protein_coding MGP_BALBcJ_T0048983.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9834971 9909532 - Osbpl1a protein_coding retained_intron MGP_BALBcJ_T0048984.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9864087 9909468 - MGP_BALBcJ_P0048984 Osbpl1a protein_coding protein_coding MGP_BALBcJ_T0048985.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9872599 9909497 - MGP_BALBcJ_P0048985 Osbpl1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048986.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9894613 9909483 - Osbpl1a protein_coding retained_intron MGP_BALBcJ_T0048987.1 MGP_BALBcJ_G0024124.1 mouse_genomes_project 18 9900176 9909480 - Osbpl1a protein_coding processed_transcript MGP_BALBcJ_T0013293.1 MGP_BALBcJ_G0011390.1 mouse_genomes_project 18 9452307 9453082 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049145.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31382719 31481218 + MGP_BALBcJ_P0049145 Apc protein_coding protein_coding MGP_BALBcJ_T0049146.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31382779 31489899 + MGP_BALBcJ_P0049146 Apc protein_coding protein_coding MGP_BALBcJ_T0049147.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31382779 31486318 + MGP_BALBcJ_P0049147 Apc protein_coding protein_coding MGP_BALBcJ_T0049148.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31382808 31467869 + Apc protein_coding retained_intron MGP_BALBcJ_T0049149.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31383047 31442639 + MGP_BALBcJ_P0049149 Apc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049150.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31413524 31429508 + Apc protein_coding retained_intron MGP_BALBcJ_T0049151.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31413528 31457392 + MGP_BALBcJ_P0049151 Apc protein_coding protein_coding MGP_BALBcJ_T0049152.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31467632 31482038 + MGP_BALBcJ_P0049152 Apc protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049153.1 MGP_BALBcJ_G0024202.1 mouse_genomes_project 18 31468927 31478450 + Apc protein_coding processed_transcript MGP_BALBcJ_T0006979.1 MGP_BALBcJ_G0005737.1 mouse_genomes_project 18 7919456 7921854 - 1010001N08Rik lincRNA lincRNA MGP_BALBcJ_T0006980.1 MGP_BALBcJ_G0005737.1 mouse_genomes_project 18 7920300 7922930 - 1010001N08Rik lincRNA lincRNA MGP_BALBcJ_T0049680.1 MGP_BALBcJ_G0024415.1 mouse_genomes_project 18 54821234 54830852 + MGP_BALBcJ_P0049680 Ctxn3 protein_coding protein_coding MGP_BALBcJ_T0049298.1 MGP_BALBcJ_G0024247.1 mouse_genomes_project 18 33887066 33888924 + MGP_BALBcJ_P0049298 Eif4ebp3 protein_coding protein_coding MGP_BALBcJ_T0011439.1 MGP_BALBcJ_G0009564.1 mouse_genomes_project 18 52928215 52928500 - Gm24514 misc_RNA misc_RNA MGP_BALBcJ_T0013313.1 MGP_BALBcJ_G0011410.1 mouse_genomes_project 18 35982358 35982960 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049737.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58293836 58358881 + MGP_BALBcJ_P0049737 Camk2a protein_coding protein_coding MGP_BALBcJ_T0049738.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58293850 58311440 + Camk2a protein_coding retained_intron MGP_BALBcJ_T0049739.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58293850 58357135 + MGP_BALBcJ_P0049739 Camk2a protein_coding protein_coding MGP_BALBcJ_T0049740.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58293943 58311458 + MGP_BALBcJ_P0049740 Camk2a protein_coding protein_coding MGP_BALBcJ_T0049741.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58295163 58324580 + MGP_BALBcJ_P0049741 Camk2a protein_coding protein_coding MGP_BALBcJ_T0049742.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58332747 58355599 + MGP_BALBcJ_P0049742 Camk2a protein_coding protein_coding MGP_BALBcJ_T0049743.1 MGP_BALBcJ_G0024437.1 mouse_genomes_project 18 58332793 58356433 + MGP_BALBcJ_P0049743 Camk2a protein_coding protein_coding MGP_BALBcJ_T0003776.1 MGP_BALBcJ_G0003395.1 mouse_genomes_project 18 3071817 3085196 + Gm17036 antisense antisense MGP_BALBcJ_T0050089.1 MGP_BALBcJ_G0024543.1 mouse_genomes_project 18 75200828 75283868 - MGP_BALBcJ_P0050089 8030462N17Rik protein_coding protein_coding MGP_BALBcJ_T0049679.1 MGP_BALBcJ_G0024414.1 mouse_genomes_project 18 54705028 54743737 + MGP_BALBcJ_P0049679 Prrc1 protein_coding protein_coding MGP_BALBcJ_T0049745.1 MGP_BALBcJ_G0024439.1 mouse_genomes_project 18 58391168 58408628 - MGP_BALBcJ_P0049745 Cdx1 protein_coding protein_coding MGP_BALBcJ_T0050000.1 MGP_BALBcJ_G0024517.1 mouse_genomes_project 18 71298649 71344143 - MGP_BALBcJ_P0050000 Me2 protein_coding protein_coding MGP_BALBcJ_T0049873.1 MGP_BALBcJ_G0024486.1 mouse_genomes_project 18 64710486 64734962 - MGP_BALBcJ_P0049873 Mppe1 protein_coding protein_coding MGP_BALBcJ_T0010245.1 MGP_BALBcJ_G0008370.1 mouse_genomes_project 18 59030298 59030361 - Mir143 miRNA miRNA MGP_BALBcJ_T0010224.1 MGP_BALBcJ_G0008349.1 mouse_genomes_project 18 33166278 33166370 + Gm23882 miRNA miRNA MGP_BALBcJ_T0049782.1 MGP_BALBcJ_G0024453.1 mouse_genomes_project 18 59351188 59415385 + MGP_BALBcJ_P0049782 Sh3tc2 protein_coding protein_coding MGP_BALBcJ_T0003777.1 MGP_BALBcJ_G0003396.1 mouse_genomes_project 18 3347221 3354050 + Gm28529 antisense antisense MGP_BALBcJ_T0003778.1 MGP_BALBcJ_G0003396.1 mouse_genomes_project 18 3347233 3348203 + Gm28529 antisense antisense MGP_BALBcJ_T0048814.1 MGP_BALBcJ_G0024081.1 mouse_genomes_project 18 254601 310065 + MGP_BALBcJ_P0048814 Cul2 protein_coding protein_coding MGP_BALBcJ_T0048815.1 MGP_BALBcJ_G0024081.1 mouse_genomes_project 18 254838 309076 + MGP_BALBcJ_P0048815 Cul2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048816.1 MGP_BALBcJ_G0024081.1 mouse_genomes_project 18 254845 310068 + MGP_BALBcJ_P0048816 Cul2 protein_coding protein_coding MGP_BALBcJ_T0048817.1 MGP_BALBcJ_G0024081.1 mouse_genomes_project 18 254870 305221 + MGP_BALBcJ_P0048817 Cul2 protein_coding protein_coding MGP_BALBcJ_T0048818.1 MGP_BALBcJ_G0024081.1 mouse_genomes_project 18 298141 300940 + Cul2 protein_coding processed_transcript MGP_BALBcJ_T0048819.1 MGP_BALBcJ_G0024081.1 mouse_genomes_project 18 307573 308704 + Cul2 protein_coding processed_transcript MGP_BALBcJ_T0010229.1 MGP_BALBcJ_G0008354.1 mouse_genomes_project 18 38625131 38625222 - Gm44476 miRNA miRNA MGP_BALBcJ_T0013291.1 MGP_BALBcJ_G0011388.1 mouse_genomes_project 18 9241460 9241782 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049513.1 MGP_BALBcJ_G0024346.1 mouse_genomes_project 18 39571430 39637553 + MGP_BALBcJ_P0049513 Rbm27 protein_coding protein_coding MGP_BALBcJ_T0049514.1 MGP_BALBcJ_G0024346.1 mouse_genomes_project 18 39571430 39637553 + MGP_BALBcJ_P0049514 Rbm27 protein_coding protein_coding MGP_BALBcJ_T0049563.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42558254 42579719 + Kcnn2 protein_coding processed_transcript MGP_BALBcJ_T0049564.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42558399 42961627 + MGP_BALBcJ_P0049564 Kcnn2 protein_coding protein_coding MGP_BALBcJ_T0049565.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42558399 42961766 + MGP_BALBcJ_P0049565 Kcnn2 protein_coding protein_coding MGP_BALBcJ_T0049566.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42834740 42946750 + Kcnn2 protein_coding retained_intron MGP_BALBcJ_T0049567.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42835082 42868453 + Kcnn2 protein_coding retained_intron MGP_BALBcJ_T0049568.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42835425 42951105 + Kcnn2 protein_coding processed_transcript MGP_BALBcJ_T0049569.1 MGP_BALBcJ_G0024370.1 mouse_genomes_project 18 42835425 42961624 + MGP_BALBcJ_P0049569 Kcnn2 protein_coding protein_coding MGP_BALBcJ_T0049746.1 MGP_BALBcJ_G0024440.1 mouse_genomes_project 18 58417567 58463378 + MGP_BALBcJ_P0049746 Pdgfrb protein_coding protein_coding MGP_BALBcJ_T0049747.1 MGP_BALBcJ_G0024440.1 mouse_genomes_project 18 58417617 58463373 + MGP_BALBcJ_P0049747 Pdgfrb protein_coding protein_coding MGP_BALBcJ_T0049748.1 MGP_BALBcJ_G0024440.1 mouse_genomes_project 18 58417791 58463381 + MGP_BALBcJ_P0049748 Pdgfrb protein_coding unknown_likely_coding MGP_BALBcJ_T0100872.1 MGP_BALBcJ_G0038908.1 mouse_genomes_project 18 34940462 34940553 + Gm24401 snoRNA snoRNA MGP_BALBcJ_T0049697.1 MGP_BALBcJ_G0024423.1 mouse_genomes_project 18 56518573 56755348 + MGP_BALBcJ_P0049697 Chsy3 protein_coding protein_coding MGP_BALBcJ_T0049814.1 MGP_BALBcJ_G0024465.1 mouse_genomes_project 18 61073073 61104754 - MGP_BALBcJ_P0049814 Txnl1 protein_coding protein_coding MGP_BALBcJ_T0011446.1 MGP_BALBcJ_G0009571.1 mouse_genomes_project 18 75379323 75379676 - Gm23954 misc_RNA misc_RNA MGP_BALBcJ_T0100881.1 MGP_BALBcJ_G0038917.1 mouse_genomes_project 18 72464407 72464528 - Gm24559 snoRNA snoRNA MGP_BALBcJ_T0050098.1 MGP_BALBcJ_G0024548.1 mouse_genomes_project 18 75576398 75590842 - MGP_BALBcJ_P0050098 Siglec15 protein_coding protein_coding MGP_BALBcJ_T0049164.1 MGP_BALBcJ_G0024207.1 mouse_genomes_project 18 31712968 31718922 + MGP_BALBcJ_P0049164 Wnt8a protein_coding protein_coding MGP_BALBcJ_T0010257.1 MGP_BALBcJ_G0008382.1 mouse_genomes_project 18 86560762 86560843 + Mir6359 miRNA miRNA MGP_BALBcJ_T0017591.1 MGP_BALBcJ_G0015302.1 mouse_genomes_project 18 47038745 47040324 + Gm16283 processed_transcript processed_transcript MGP_BALBcJ_T0049516.1 MGP_BALBcJ_G0024348.1 mouse_genomes_project 18 39810481 39875604 + MGP_BALBcJ_P0049516 Tcerg1 protein_coding protein_coding MGP_BALBcJ_T0049517.1 MGP_BALBcJ_G0024348.1 mouse_genomes_project 18 39810494 39874897 + MGP_BALBcJ_P0049517 Tcerg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048776.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 137993 199981 - MGP_BALBcJ_P0048776 Crem protein_coding protein_coding MGP_BALBcJ_T0048777.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138299 217004 - MGP_BALBcJ_P0048777 Crem protein_coding protein_coding MGP_BALBcJ_T0048778.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138301 216914 - MGP_BALBcJ_P0048778 Crem protein_coding protein_coding MGP_BALBcJ_T0048779.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138301 216914 - MGP_BALBcJ_P0048779 Crem protein_coding protein_coding MGP_BALBcJ_T0048780.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138301 216813 - MGP_BALBcJ_P0048780 Crem protein_coding protein_coding MGP_BALBcJ_T0048781.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138301 216914 - MGP_BALBcJ_P0048781 Crem protein_coding protein_coding MGP_BALBcJ_T0048782.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138301 172224 - MGP_BALBcJ_P0048782 Crem protein_coding protein_coding MGP_BALBcJ_T0048783.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138902 153635 - MGP_BALBcJ_P0048783 Crem protein_coding protein_coding MGP_BALBcJ_T0048784.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 138908 216838 - Crem protein_coding processed_transcript MGP_BALBcJ_T0048785.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139206 217073 - MGP_BALBcJ_P0048785 Crem protein_coding protein_coding MGP_BALBcJ_T0048786.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139209 172221 - MGP_BALBcJ_P0048786 Crem protein_coding protein_coding MGP_BALBcJ_T0048787.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139335 153613 - MGP_BALBcJ_P0048787 Crem protein_coding protein_coding MGP_BALBcJ_T0048788.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139368 199897 - MGP_BALBcJ_P0048788 Crem protein_coding protein_coding MGP_BALBcJ_T0048789.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139459 197864 - MGP_BALBcJ_P0048789 Crem protein_coding protein_coding MGP_BALBcJ_T0048790.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139479 152997 - MGP_BALBcJ_P0048790 Crem protein_coding protein_coding MGP_BALBcJ_T0048791.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139491 152943 - MGP_BALBcJ_P0048791 Crem protein_coding protein_coding MGP_BALBcJ_T0048792.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139503 197868 - MGP_BALBcJ_P0048792 Crem protein_coding protein_coding MGP_BALBcJ_T0048793.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139517 153635 - MGP_BALBcJ_P0048793 Crem protein_coding protein_coding MGP_BALBcJ_T0048794.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139520 197864 - MGP_BALBcJ_P0048794 Crem protein_coding protein_coding MGP_BALBcJ_T0048795.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139530 199897 - MGP_BALBcJ_P0048795 Crem protein_coding protein_coding MGP_BALBcJ_T0048796.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139530 216858 - MGP_BALBcJ_P0048796 Crem protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048797.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139530 199897 - MGP_BALBcJ_P0048797 Crem protein_coding protein_coding MGP_BALBcJ_T0048798.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139530 199897 - MGP_BALBcJ_P0048798 Crem protein_coding protein_coding MGP_BALBcJ_T0048799.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139530 199897 - MGP_BALBcJ_P0048799 Crem protein_coding protein_coding MGP_BALBcJ_T0048800.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139533 182394 - MGP_BALBcJ_P0048800 Crem protein_coding protein_coding MGP_BALBcJ_T0048801.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139533 182394 - MGP_BALBcJ_P0048801 Crem protein_coding protein_coding MGP_BALBcJ_T0048802.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139533 197864 - MGP_BALBcJ_P0048802 Crem protein_coding protein_coding MGP_BALBcJ_T0048803.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139533 182529 - MGP_BALBcJ_P0048803 Crem protein_coding protein_coding MGP_BALBcJ_T0048804.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139578 152966 - MGP_BALBcJ_P0048804 Crem protein_coding protein_coding MGP_BALBcJ_T0048805.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139784 197864 - MGP_BALBcJ_P0048805 Crem protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048806.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139790 153604 - MGP_BALBcJ_P0048806 Crem protein_coding protein_coding MGP_BALBcJ_T0048807.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139930 172117 - MGP_BALBcJ_P0048807 Crem protein_coding protein_coding MGP_BALBcJ_T0048808.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 139930 182571 - MGP_BALBcJ_P0048808 Crem protein_coding protein_coding MGP_BALBcJ_T0048809.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 155763 172206 - Crem protein_coding processed_transcript MGP_BALBcJ_T0048810.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 159497 172221 - Crem protein_coding retained_intron MGP_BALBcJ_T0048811.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 159920 172219 - Crem protein_coding processed_transcript MGP_BALBcJ_T0048812.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 166049 216914 - MGP_BALBcJ_P0048812 Crem protein_coding protein_coding MGP_BALBcJ_T0048813.1 MGP_BALBcJ_G0024080.1 mouse_genomes_project 18 166345 216899 - MGP_BALBcJ_P0048813 Crem protein_coding protein_coding MGP_BALBcJ_T0099605.1 MGP_BALBcJ_G0037641.1 mouse_genomes_project 18 35542284 35542387 + Gm23205 snRNA snRNA MGP_BALBcJ_T0099613.1 MGP_BALBcJ_G0037649.1 mouse_genomes_project 18 52501385 52501465 + Gm22597 snRNA snRNA MGP_BALBcJ_T0007019.1 MGP_BALBcJ_G0005765.1 mouse_genomes_project 18 63378400 63381311 + Raxos1 lincRNA lincRNA MGP_BALBcJ_T0013330.1 MGP_BALBcJ_G0011427.1 mouse_genomes_project 18 53061448 53062426 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049315.1 MGP_BALBcJ_G0024254.1 mouse_genomes_project 18 33967825 33980820 + MGP_BALBcJ_P0049315 Ik protein_coding protein_coding MGP_BALBcJ_T0049316.1 MGP_BALBcJ_G0024254.1 mouse_genomes_project 18 33967868 33980823 + MGP_BALBcJ_P0049316 Ik protein_coding unknown_likely_coding MGP_BALBcJ_T0049081.1 MGP_BALBcJ_G0024169.1 mouse_genomes_project 18 21859878 21907308 + MGP_BALBcJ_P0049081 Mocos protein_coding protein_coding MGP_BALBcJ_T0003791.1 MGP_BALBcJ_G0003406.1 mouse_genomes_project 18 34176743 34177136 - Gm38225 antisense antisense MGP_BALBcJ_T0049877.1 MGP_BALBcJ_G0024490.1 mouse_genomes_project 18 64903307 64949195 - MGP_BALBcJ_P0049877 Afg3l2 protein_coding protein_coding MGP_BALBcJ_T0001007.1 MGP_BALBcJ_G0000935.1 mouse_genomes_project 18 77906046 77909092 + TEC TEC MGP_BALBcJ_T0013304.1 MGP_BALBcJ_G0011401.1 mouse_genomes_project 18 27660835 27661312 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100862.1 MGP_BALBcJ_G0038898.1 mouse_genomes_project 18 25514586 25514718 + Gm24246 snoRNA snoRNA MGP_BALBcJ_T0049339.1 MGP_BALBcJ_G0024265.1 mouse_genomes_project 18 34184556 34406362 + MGP_BALBcJ_P0049339 Pcdha5 protein_coding protein_coding MGP_BALBcJ_T0049030.1 MGP_BALBcJ_G0024152.1 mouse_genomes_project 18 18315180 18481497 - MGP_BALBcJ_P0049030 Garem protein_coding protein_coding MGP_BALBcJ_T0048871.1 MGP_BALBcJ_G0024091.1 mouse_genomes_project 18 3059809 3099871 - MGP_BALBcJ_P0048871 Kif5b protein_coding protein_coding MGP_BALBcJ_T0048872.1 MGP_BALBcJ_G0024091.1 mouse_genomes_project 18 3061107 3072446 - Kif5b protein_coding retained_intron MGP_BALBcJ_T0048873.1 MGP_BALBcJ_G0024091.1 mouse_genomes_project 18 3071340 3081888 - Kif5b protein_coding retained_intron MGP_BALBcJ_T0048874.1 MGP_BALBcJ_G0024091.1 mouse_genomes_project 18 3072474 3099818 - MGP_BALBcJ_P0048874 Kif5b protein_coding protein_coding MGP_BALBcJ_T0048875.1 MGP_BALBcJ_G0024091.1 mouse_genomes_project 18 3078714 3080900 - Kif5b protein_coding retained_intron MGP_BALBcJ_T0048876.1 MGP_BALBcJ_G0024091.1 mouse_genomes_project 18 3099661 3100522 - Kif5b protein_coding processed_transcript MGP_BALBcJ_T0049245.1 MGP_BALBcJ_G0024231.1 mouse_genomes_project 18 32848339 32853227 - MGP_BALBcJ_P0049245 Prob1 protein_coding protein_coding MGP_BALBcJ_T0049246.1 MGP_BALBcJ_G0024231.1 mouse_genomes_project 18 32848343 32849995 - Prob1 protein_coding processed_transcript MGP_BALBcJ_T0049247.1 MGP_BALBcJ_G0024231.1 mouse_genomes_project 18 32850155 32853176 - MGP_BALBcJ_P0049247 Prob1 protein_coding protein_coding MGP_BALBcJ_T0049651.1 MGP_BALBcJ_G0024405.1 mouse_genomes_project 18 52206483 52309045 - MGP_BALBcJ_P0049651 Zfp608 protein_coding protein_coding MGP_BALBcJ_T0049193.1 MGP_BALBcJ_G0024216.1 mouse_genomes_project 18 31933420 31948171 + MGP_BALBcJ_P0049193 Fam53c protein_coding protein_coding MGP_BALBcJ_T0049194.1 MGP_BALBcJ_G0024216.1 mouse_genomes_project 18 31934070 31948149 + MGP_BALBcJ_P0049194 Fam53c protein_coding protein_coding MGP_BALBcJ_T0048888.1 MGP_BALBcJ_G0024096.1 mouse_genomes_project 18 3946309 4147310 - MGP_BALBcJ_P0048888 Armc4 protein_coding protein_coding MGP_BALBcJ_T0048889.1 MGP_BALBcJ_G0024096.1 mouse_genomes_project 18 3982544 4147342 - MGP_BALBcJ_P0048889 Armc4 protein_coding unknown_likely_coding MGP_BALBcJ_T0049114.1 MGP_BALBcJ_G0024183.1 mouse_genomes_project 18 29023461 29128747 + MGP_BALBcJ_P0049114 Wdr33 protein_coding protein_coding MGP_BALBcJ_T0049115.1 MGP_BALBcJ_G0024183.1 mouse_genomes_project 18 29023461 29060833 + MGP_BALBcJ_P0049115 Wdr33 protein_coding protein_coding MGP_BALBcJ_T0099623.1 MGP_BALBcJ_G0037659.1 mouse_genomes_project 18 76069136 76069243 + Gm26430 snRNA snRNA MGP_BALBcJ_T0049031.1 MGP_BALBcJ_G0024153.1 mouse_genomes_project 18 18744919 18847998 - MGP_BALBcJ_P0049031 Klhl14 protein_coding protein_coding MGP_BALBcJ_T0049032.1 MGP_BALBcJ_G0024153.1 mouse_genomes_project 18 18744921 18850348 - MGP_BALBcJ_P0049032 Klhl14 protein_coding protein_coding MGP_BALBcJ_T0049123.1 MGP_BALBcJ_G0024190.1 mouse_genomes_project 18 29339100 29355937 - MGP_BALBcJ_P0049123 Proc protein_coding protein_coding MGP_BALBcJ_T0049008.1 MGP_BALBcJ_G0024138.1 mouse_genomes_project 18 17089219 17118025 - MGP_BALBcJ_P0049008 Dsc2 protein_coding protein_coding MGP_BALBcJ_T0049009.1 MGP_BALBcJ_G0024138.1 mouse_genomes_project 18 17089219 17118101 - MGP_BALBcJ_P0049009 Dsc2 protein_coding protein_coding MGP_BALBcJ_T0049010.1 MGP_BALBcJ_G0024138.1 mouse_genomes_project 18 17089929 17096693 - MGP_BALBcJ_P0049010 Dsc2 protein_coding protein_coding MGP_BALBcJ_T0049011.1 MGP_BALBcJ_G0024138.1 mouse_genomes_project 18 17090065 17118056 - MGP_BALBcJ_P0049011 Dsc2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0003788.1 MGP_BALBcJ_G0003403.1 mouse_genomes_project 18 20935469 20937327 - Gm15972 antisense antisense MGP_BALBcJ_T0048992.1 MGP_BALBcJ_G0024129.1 mouse_genomes_project 18 11599258 11665969 - MGP_BALBcJ_P0048992 Ss18 protein_coding protein_coding MGP_BALBcJ_T0048993.1 MGP_BALBcJ_G0024129.1 mouse_genomes_project 18 11625751 11665965 - MGP_BALBcJ_P0048993 Ss18 protein_coding unknown_likely_coding MGP_BALBcJ_T0048994.1 MGP_BALBcJ_G0024129.1 mouse_genomes_project 18 11628085 11665965 - MGP_BALBcJ_P0048994 Ss18 protein_coding unknown_likely_coding MGP_BALBcJ_T0049538.1 MGP_BALBcJ_G0024357.1 mouse_genomes_project 18 41271373 41330840 + MGP_BALBcJ_P0049538 Spink5 protein_coding protein_coding MGP_BALBcJ_T0050090.1 MGP_BALBcJ_G0024544.1 mouse_genomes_project 18 75330782 75341156 - MGP_BALBcJ_P0050090 Haus1 protein_coding protein_coding MGP_BALBcJ_T0017608.1 MGP_BALBcJ_G0015307.1 mouse_genomes_project 18 64815410 64822378 - B430212C06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017609.1 MGP_BALBcJ_G0015307.1 mouse_genomes_project 18 64815410 64839573 - B430212C06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017610.1 MGP_BALBcJ_G0015307.1 mouse_genomes_project 18 64815590 64839053 - B430212C06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017611.1 MGP_BALBcJ_G0015307.1 mouse_genomes_project 18 64817219 64822557 - B430212C06Rik processed_transcript retained_intron MGP_BALBcJ_T0017612.1 MGP_BALBcJ_G0015307.1 mouse_genomes_project 18 64817232 64822617 - B430212C06Rik processed_transcript processed_transcript MGP_BALBcJ_T0049409.1 MGP_BALBcJ_G0024318.1 mouse_genomes_project 18 35041677 35045057 + Pcdhgc3 protein_coding retained_intron MGP_BALBcJ_T0049410.1 MGP_BALBcJ_G0024318.1 mouse_genomes_project 18 35041723 35077409 + MGP_BALBcJ_P0049410 Pcdhgc3 protein_coding protein_coding MGP_BALBcJ_T0049411.1 MGP_BALBcJ_G0024318.1 mouse_genomes_project 18 35041729 35077409 + MGP_BALBcJ_P0049411 Pcdhgc3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050208.1 MGP_BALBcJ_G0024583.1 mouse_genomes_project 18 86895496 87372072 - MGP_BALBcJ_P0050208 Dok6 protein_coding protein_coding MGP_BALBcJ_T0050209.1 MGP_BALBcJ_G0024583.1 mouse_genomes_project 18 87060505 87152917 - Dok6 protein_coding retained_intron MGP_BALBcJ_T0049468.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 35854641 35900741 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049469.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 35854709 36053803 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049470.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 35882155 35897766 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049471.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 35937509 36040706 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049472.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 35937509 36375325 + MGP_BALBcJ_P0049472 Arhgap26 protein_coding protein_coding MGP_BALBcJ_T0049480.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36163309 36234964 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049481.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36219388 36234627 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049482.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36257069 36364963 + Arhgap26 protein_coding retained_intron MGP_BALBcJ_T0049483.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36257069 36643061 + MGP_BALBcJ_P0049483 Arhgap26 protein_coding protein_coding MGP_BALBcJ_T0049484.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36257400 36637986 + MGP_BALBcJ_P0049484 Arhgap26 protein_coding protein_coding MGP_BALBcJ_T0049485.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36364124 36392178 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049486.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36491896 36639327 + MGP_BALBcJ_P0049486 Arhgap26 protein_coding protein_coding MGP_BALBcJ_T0049487.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36552481 36643061 + MGP_BALBcJ_P0049487 Arhgap26 protein_coding protein_coding MGP_BALBcJ_T0049488.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36557315 36573249 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049489.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36562657 36637953 + MGP_BALBcJ_P0049489 Arhgap26 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049490.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36562657 36627404 + MGP_BALBcJ_P0049490 Arhgap26 protein_coding protein_coding MGP_BALBcJ_T0049491.1 MGP_BALBcJ_G0024333.1 mouse_genomes_project 18 36629393 36633879 + Arhgap26 protein_coding processed_transcript MGP_BALBcJ_T0049882.1 MGP_BALBcJ_G0024494.1 mouse_genomes_project 18 65122342 65146404 - MGP_BALBcJ_P0049882 Cep76 protein_coding protein_coding MGP_BALBcJ_T0049137.1 MGP_BALBcJ_G0024198.1 mouse_genomes_project 18 30382584 30397662 - MGP_BALBcJ_P0049137 Stard4 protein_coding protein_coding MGP_BALBcJ_T0049138.1 MGP_BALBcJ_G0024198.1 mouse_genomes_project 18 30386853 30397757 - MGP_BALBcJ_P0049138 Stard4 protein_coding protein_coding MGP_BALBcJ_T0049139.1 MGP_BALBcJ_G0024198.1 mouse_genomes_project 18 30388335 30397812 - Stard4 protein_coding retained_intron MGP_BALBcJ_T0048820.1 MGP_BALBcJ_G0024082.1 mouse_genomes_project 18 375619 384064 + MGP_BALBcJ_P0048820 Bambi protein_coding protein_coding MGP_BALBcJ_T0013331.1 MGP_BALBcJ_G0011428.1 mouse_genomes_project 18 53163067 53164045 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049999.1 MGP_BALBcJ_G0024516.1 mouse_genomes_project 18 71263338 71282767 - MGP_BALBcJ_P0049999 Elac1 protein_coding protein_coding MGP_BALBcJ_T0098554.1 MGP_BALBcJ_G0036608.1 mouse_genomes_project 18 60928636 60928756 + Gm22560 rRNA rRNA MGP_BALBcJ_T0010227.1 MGP_BALBcJ_G0008352.1 mouse_genomes_project 18 35210557 35210672 - Mir6981 miRNA miRNA MGP_BALBcJ_T0049067.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21388549 21470206 + MGP_BALBcJ_P0049067 Galnt1 protein_coding protein_coding MGP_BALBcJ_T0049068.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21388972 21470198 + MGP_BALBcJ_P0049068 Galnt1 protein_coding protein_coding MGP_BALBcJ_T0049069.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21389164 21437865 + MGP_BALBcJ_P0049069 Galnt1 protein_coding protein_coding MGP_BALBcJ_T0049070.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21415551 21470198 + MGP_BALBcJ_P0049070 Galnt1 protein_coding protein_coding MGP_BALBcJ_T0049071.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21421645 21450725 + MGP_BALBcJ_P0049071 Galnt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049072.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21428847 21454727 + MGP_BALBcJ_P0049072 Galnt1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049073.1 MGP_BALBcJ_G0024164.1 mouse_genomes_project 18 21463090 21466568 + Galnt1 protein_coding processed_transcript MGP_BALBcJ_T0050048.1 MGP_BALBcJ_G0024535.1 mouse_genomes_project 18 74485312 74496892 + MGP_BALBcJ_P0050048 Ier3ip1 protein_coding protein_coding MGP_BALBcJ_T0050049.1 MGP_BALBcJ_G0024535.1 mouse_genomes_project 18 74485340 74496892 + Ier3ip1 protein_coding processed_transcript MGP_BALBcJ_T0050050.1 MGP_BALBcJ_G0024535.1 mouse_genomes_project 18 74485358 74495035 + Ier3ip1 protein_coding retained_intron MGP_BALBcJ_T0050052.1 MGP_BALBcJ_G0024535.1 mouse_genomes_project 18 74494570 74495976 + Ier3ip1 protein_coding retained_intron MGP_BALBcJ_T0098749.1 MGP_BALBcJ_G0036803.1 mouse_genomes_project 18 72334875 72335015 - Gm23119 scaRNA scaRNA MGP_BALBcJ_T0049378.1 MGP_BALBcJ_G0024296.1 mouse_genomes_project 18 34734755 34739460 + MGP_BALBcJ_P0049378 Pcdhb21 protein_coding protein_coding MGP_BALBcJ_T0049154.1 MGP_BALBcJ_G0024203.1 mouse_genomes_project 18 31503238 31508738 + Srp19 protein_coding processed_transcript MGP_BALBcJ_T0049155.1 MGP_BALBcJ_G0024203.1 mouse_genomes_project 18 31503514 31508914 + Srp19 protein_coding processed_transcript MGP_BALBcJ_T0049156.1 MGP_BALBcJ_G0024203.1 mouse_genomes_project 18 31503536 31508944 + Srp19 protein_coding retained_intron MGP_BALBcJ_T0049157.1 MGP_BALBcJ_G0024203.1 mouse_genomes_project 18 31503536 31508992 + MGP_BALBcJ_P0049157 Srp19 protein_coding protein_coding MGP_BALBcJ_T0049158.1 MGP_BALBcJ_G0024203.1 mouse_genomes_project 18 31503549 31508814 + MGP_BALBcJ_P0049158 Srp19 protein_coding protein_coding MGP_BALBcJ_T0049159.1 MGP_BALBcJ_G0024203.1 mouse_genomes_project 18 31503567 31508946 + MGP_BALBcJ_P0049159 Srp19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0100875.1 MGP_BALBcJ_G0038911.1 mouse_genomes_project 18 52404897 52404990 - Gm24183 snoRNA snoRNA MGP_BALBcJ_T0100880.1 MGP_BALBcJ_G0038916.1 mouse_genomes_project 18 64965455 64965589 + Gm24900 snoRNA snoRNA MGP_BALBcJ_T0049368.1 MGP_BALBcJ_G0024286.1 mouse_genomes_project 18 34640996 34645415 + MGP_BALBcJ_P0049368 Pcdhb11 protein_coding protein_coding MGP_BALBcJ_T0049217.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749797 32760664 + MGP_BALBcJ_P0049217 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049218.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749809 32789778 + MGP_BALBcJ_P0049218 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049219.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749843 32760297 + MGP_BALBcJ_P0049219 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049220.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749862 32787153 + MGP_BALBcJ_P0049220 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049221.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749862 32786345 + MGP_BALBcJ_P0049221 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049222.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749868 32786368 + MGP_BALBcJ_P0049222 Matr3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049223.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749870 32786328 + MGP_BALBcJ_P0049223 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049224.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32749950 32786276 + MGP_BALBcJ_P0049224 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049225.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32750096 32786485 + MGP_BALBcJ_P0049225 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049226.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32750104 32786211 + MGP_BALBcJ_P0049226 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049227.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32750138 32768617 + MGP_BALBcJ_P0049227 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049228.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32750334 32760377 + MGP_BALBcJ_P0049228 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049229.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32750340 32768902 + MGP_BALBcJ_P0049229 Matr3 protein_coding protein_coding MGP_BALBcJ_T0049230.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32760100 32763323 + Matr3 protein_coding retained_intron MGP_BALBcJ_T0049231.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32767509 32768885 + Matr3 protein_coding retained_intron MGP_BALBcJ_T0049232.1 MGP_BALBcJ_G0024227.1 mouse_genomes_project 18 32768635 32770335 + Matr3 protein_coding retained_intron MGP_BALBcJ_T0006988.1 MGP_BALBcJ_G0005742.1 mouse_genomes_project 18 29000859 29008613 - Gm26533 lincRNA lincRNA MGP_BALBcJ_T0049669.1 MGP_BALBcJ_G0024410.1 mouse_genomes_project 18 54057783 54104178 + MGP_BALBcJ_P0049669 Lmnb1 protein_coding protein_coding MGP_BALBcJ_T0049670.1 MGP_BALBcJ_G0024410.1 mouse_genomes_project 18 54079249 54084254 + Lmnb1 protein_coding retained_intron MGP_BALBcJ_T0013307.1 MGP_BALBcJ_G0011404.1 mouse_genomes_project 18 32971854 32972205 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049967.1 MGP_BALBcJ_G0024507.1 mouse_genomes_project 18 67508813 67666250 - MGP_BALBcJ_P0049967 Rab27b protein_coding protein_coding MGP_BALBcJ_T0049968.1 MGP_BALBcJ_G0024507.1 mouse_genomes_project 18 67513338 67574063 - MGP_BALBcJ_P0049968 Rab27b protein_coding protein_coding MGP_BALBcJ_T0049969.1 MGP_BALBcJ_G0024507.1 mouse_genomes_project 18 67513338 67574063 - MGP_BALBcJ_P0049969 Rab27b protein_coding protein_coding MGP_BALBcJ_T0049970.1 MGP_BALBcJ_G0024507.1 mouse_genomes_project 18 67662805 67666219 - Rab27b protein_coding retained_intron MGP_BALBcJ_T0049059.1 MGP_BALBcJ_G0024160.1 mouse_genomes_project 18 21148599 21155442 - MGP_BALBcJ_P0049059 Zscan30 protein_coding protein_coding MGP_BALBcJ_T0007005.1 MGP_BALBcJ_G0005755.1 mouse_genomes_project 18 46806979 46808131 + 1700044K03Rik lincRNA lincRNA MGP_BALBcJ_T0049429.1 MGP_BALBcJ_G0024322.1 mouse_genomes_project 18 35171512 35181215 - Hdac3 protein_coding retained_intron MGP_BALBcJ_T0049430.1 MGP_BALBcJ_G0024322.1 mouse_genomes_project 18 35172640 35179730 - Hdac3 protein_coding retained_intron MGP_BALBcJ_T0049431.1 MGP_BALBcJ_G0024322.1 mouse_genomes_project 18 35172640 35191045 - MGP_BALBcJ_P0049431 Hdac3 protein_coding protein_coding MGP_BALBcJ_T0049432.1 MGP_BALBcJ_G0024322.1 mouse_genomes_project 18 35172646 35190988 - Hdac3 protein_coding processed_transcript MGP_BALBcJ_T0049709.1 MGP_BALBcJ_G0024430.1 mouse_genomes_project 18 57940532 57954662 - MGP_BALBcJ_P0049709 Myoz3 protein_coding protein_coding MGP_BALBcJ_T0048905.1 MGP_BALBcJ_G0024100.1 mouse_genomes_project 18 6133313 6137551 - MGP_BALBcJ_P0048905 Gjd4 protein_coding protein_coding MGP_BALBcJ_T0100879.1 MGP_BALBcJ_G0038915.1 mouse_genomes_project 18 64023044 64023155 - Gm24679 snoRNA snoRNA MGP_BALBcJ_T0099616.1 MGP_BALBcJ_G0037652.1 mouse_genomes_project 18 58846564 58846665 - Gm25834 snRNA snRNA MGP_BALBcJ_T0099611.1 MGP_BALBcJ_G0037647.1 mouse_genomes_project 18 48925001 48925127 - Gm25785 snRNA snRNA MGP_BALBcJ_T0007026.1 MGP_BALBcJ_G0005772.1 mouse_genomes_project 18 80334706 80339243 - 2210420H20Rik lincRNA lincRNA MGP_BALBcJ_T0049006.1 MGP_BALBcJ_G0024137.1 mouse_genomes_project 18 17013575 17055830 - MGP_BALBcJ_P0049006 Dsc3 protein_coding protein_coding MGP_BALBcJ_T0049007.1 MGP_BALBcJ_G0024137.1 mouse_genomes_project 18 17016310 17055658 - MGP_BALBcJ_P0049007 Dsc3 protein_coding unknown_likely_coding MGP_BALBcJ_T0007025.1 MGP_BALBcJ_G0005771.1 mouse_genomes_project 18 78773161 78783020 - 4930594M17Rik lincRNA lincRNA MGP_BALBcJ_T0048968.1 MGP_BALBcJ_G0024122.1 mouse_genomes_project 18 9600028 9649577 + Ttc39c protein_coding retained_intron MGP_BALBcJ_T0048969.1 MGP_BALBcJ_G0024122.1 mouse_genomes_project 18 9600570 9696017 + MGP_BALBcJ_P0048969 Ttc39c protein_coding protein_coding MGP_BALBcJ_T0048970.1 MGP_BALBcJ_G0024122.1 mouse_genomes_project 18 9693960 9696084 + Ttc39c protein_coding retained_intron MGP_BALBcJ_T0050188.1 MGP_BALBcJ_G0024575.1 mouse_genomes_project 18 82436272 82465635 + MGP_BALBcJ_P0050188 Cyb5a protein_coding protein_coding MGP_BALBcJ_T0050189.1 MGP_BALBcJ_G0024575.1 mouse_genomes_project 18 82436311 82464826 + MGP_BALBcJ_P0050189 Cyb5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050190.1 MGP_BALBcJ_G0024575.1 mouse_genomes_project 18 82436341 82458816 + Cyb5a protein_coding retained_intron MGP_BALBcJ_T0050191.1 MGP_BALBcJ_G0024575.1 mouse_genomes_project 18 82436813 82465096 + MGP_BALBcJ_P0050191 Cyb5a protein_coding protein_coding MGP_BALBcJ_T0050192.1 MGP_BALBcJ_G0024575.1 mouse_genomes_project 18 82462834 82465098 + Cyb5a protein_coding retained_intron MGP_BALBcJ_T0049649.1 MGP_BALBcJ_G0024403.1 mouse_genomes_project 18 51004523 51069285 - MGP_BALBcJ_P0049649 Cep120 protein_coding protein_coding MGP_BALBcJ_T0049686.1 MGP_BALBcJ_G0024418.1 mouse_genomes_project 18 55364887 55569945 - MGP_BALBcJ_P0049686 Fbn2 protein_coding protein_coding MGP_BALBcJ_T0100860.1 MGP_BALBcJ_G0038896.1 mouse_genomes_project 18 20341447 20341573 + Gm22495 snoRNA snoRNA MGP_BALBcJ_T0010236.1 MGP_BALBcJ_G0008361.1 mouse_genomes_project 18 56913221 56913327 + Mir6355 miRNA miRNA MGP_BALBcJ_T0049601.1 MGP_BALBcJ_G0024385.1 mouse_genomes_project 18 47117663 47249666 + MGP_BALBcJ_P0049601 Dmxl1 protein_coding protein_coding MGP_BALBcJ_T0049602.1 MGP_BALBcJ_G0024385.1 mouse_genomes_project 18 47117990 47250885 + MGP_BALBcJ_P0049602 Dmxl1 protein_coding protein_coding MGP_BALBcJ_T0049603.1 MGP_BALBcJ_G0024385.1 mouse_genomes_project 18 47118083 47250887 + MGP_BALBcJ_P0049603 Dmxl1 protein_coding unknown_likely_coding MGP_BALBcJ_T0049604.1 MGP_BALBcJ_G0024385.1 mouse_genomes_project 18 47178480 47217808 + Dmxl1 protein_coding retained_intron MGP_BALBcJ_T0049605.1 MGP_BALBcJ_G0024385.1 mouse_genomes_project 18 47234721 47239917 + Dmxl1 protein_coding retained_intron MGP_BALBcJ_T0049606.1 MGP_BALBcJ_G0024385.1 mouse_genomes_project 18 47241377 47245056 + Dmxl1 protein_coding retained_intron MGP_BALBcJ_T0049354.1 MGP_BALBcJ_G0024275.1 mouse_genomes_project 18 34362227 34406362 + MGP_BALBcJ_P0049354 Pcdhac2 protein_coding protein_coding MGP_BALBcJ_T0011429.1 MGP_BALBcJ_G0009554.1 mouse_genomes_project 18 21967244 21967521 + Gm24294 misc_RNA misc_RNA MGP_BALBcJ_T0048908.1 MGP_BALBcJ_G0024103.1 mouse_genomes_project 18 6564077 6741019 + MGP_BALBcJ_P0048908 Colec12 protein_coding protein_coding MGP_BALBcJ_T0013319.1 MGP_BALBcJ_G0011416.1 mouse_genomes_project 18 42575729 42576005 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049197.1 MGP_BALBcJ_G0024218.1 mouse_genomes_project 18 32015777 32022651 + MGP_BALBcJ_P0049197 Reep2 protein_coding protein_coding MGP_BALBcJ_T0099627.1 MGP_BALBcJ_G0037663.1 mouse_genomes_project 18 80930634 80930800 - Gm24720 snRNA snRNA MGP_BALBcJ_T0048881.1 MGP_BALBcJ_G0024093.1 mouse_genomes_project 18 3475650 3510039 + MGP_BALBcJ_P0048881 4921524L21Rik protein_coding protein_coding MGP_BALBcJ_T0010253.1 MGP_BALBcJ_G0008378.1 mouse_genomes_project 18 73756795 73756896 + Mir6358 miRNA miRNA MGP_BALBcJ_T0013289.1 MGP_BALBcJ_G0011386.1 mouse_genomes_project 18 9123369 9124431 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050110.1 MGP_BALBcJ_G0024557.1 mouse_genomes_project 18 77745467 77763433 + MGP_BALBcJ_P0050110 Txnl4a protein_coding protein_coding MGP_BALBcJ_T0050114.1 MGP_BALBcJ_G0024557.1 mouse_genomes_project 18 77745535 77762105 + MGP_BALBcJ_P0050114 Txnl4a protein_coding protein_coding MGP_BALBcJ_T0050116.1 MGP_BALBcJ_G0024557.1 mouse_genomes_project 18 77745566 77757643 + Txnl4a protein_coding retained_intron MGP_BALBcJ_T0050121.1 MGP_BALBcJ_G0024557.1 mouse_genomes_project 18 77754285 77762241 + Txnl4a protein_coding processed_transcript MGP_BALBcJ_T0049121.1 MGP_BALBcJ_G0024188.1 mouse_genomes_project 18 29179883 29258146 - MGP_BALBcJ_P0049121 Myo7b protein_coding protein_coding MGP_BALBcJ_T0011440.1 MGP_BALBcJ_G0009565.1 mouse_genomes_project 18 53317562 53317868 - Gm22484 misc_RNA misc_RNA MGP_BALBcJ_T0013305.1 MGP_BALBcJ_G0011402.1 mouse_genomes_project 18 27694858 27695233 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049161.1 MGP_BALBcJ_G0024205.1 mouse_genomes_project 18 31581978 31614498 + MGP_BALBcJ_P0049161 Pkd2l2 protein_coding protein_coding MGP_BALBcJ_T0049162.1 MGP_BALBcJ_G0024205.1 mouse_genomes_project 18 31581978 31615491 + MGP_BALBcJ_P0049162 Pkd2l2 protein_coding protein_coding MGP_BALBcJ_T0013303.1 MGP_BALBcJ_G0011400.1 mouse_genomes_project 18 23036259 23037662 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049035.1 MGP_BALBcJ_G0024155.1 mouse_genomes_project 18 19543099 19725513 + MGP_BALBcJ_P0049035 Asxl3 protein_coding unknown_likely_coding MGP_BALBcJ_T0049036.1 MGP_BALBcJ_G0024155.1 mouse_genomes_project 18 19543632 19579661 + Asxl3 protein_coding retained_intron MGP_BALBcJ_T0049037.1 MGP_BALBcJ_G0024155.1 mouse_genomes_project 18 19543838 19730192 + MGP_BALBcJ_P0049037 Asxl3 protein_coding protein_coding MGP_BALBcJ_T0049038.1 MGP_BALBcJ_G0024155.1 mouse_genomes_project 18 19543838 19729980 + MGP_BALBcJ_P0049038 Asxl3 protein_coding protein_coding MGP_BALBcJ_T0007020.1 MGP_BALBcJ_G0005766.1 mouse_genomes_project 18 65279563 65280709 - Gm26910 lincRNA lincRNA MGP_BALBcJ_T0049379.1 MGP_BALBcJ_G0024297.1 mouse_genomes_project 18 34739493 34742280 + MGP_BALBcJ_P0049379 Pcdhb22 protein_coding protein_coding MGP_BALBcJ_T0006992.1 MGP_BALBcJ_G0005746.1 mouse_genomes_project 18 29891707 30040687 - 4930455D15Rik lincRNA lincRNA MGP_BALBcJ_T0049635.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50095402 50238352 + MGP_BALBcJ_P0049635 Sncaip protein_coding protein_coding MGP_BALBcJ_T0049636.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50095761 50167107 + MGP_BALBcJ_P0049636 Sncaip protein_coding protein_coding MGP_BALBcJ_T0049637.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50167030 50238298 + MGP_BALBcJ_P0049637 Sncaip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049638.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50167030 50238298 + MGP_BALBcJ_P0049638 Sncaip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049639.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50167030 50238005 + MGP_BALBcJ_P0049639 Sncaip protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049640.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50167076 50237731 + MGP_BALBcJ_P0049640 Sncaip protein_coding protein_coding MGP_BALBcJ_T0049641.1 MGP_BALBcJ_G0024398.1 mouse_genomes_project 18 50167076 50237731 + MGP_BALBcJ_P0049641 Sncaip protein_coding protein_coding MGP_BALBcJ_T0049117.1 MGP_BALBcJ_G0024185.1 mouse_genomes_project 18 29128852 29131660 - MGP_BALBcJ_P0049117 Sft2d3 protein_coding protein_coding MGP_BALBcJ_T0048910.1 MGP_BALBcJ_G0024105.1 mouse_genomes_project 18 6816483 6854464 + MGP_BALBcJ_P0048910 Thoc1 protein_coding protein_coding MGP_BALBcJ_T0049407.1 MGP_BALBcJ_G0024317.1 mouse_genomes_project 18 35000317 35077409 + MGP_BALBcJ_P0049407 Pcdhga12 protein_coding protein_coding MGP_BALBcJ_T0049408.1 MGP_BALBcJ_G0024317.1 mouse_genomes_project 18 35000514 35005241 + Pcdhga12 protein_coding retained_intron MGP_BALBcJ_T0049133.1 MGP_BALBcJ_G0024195.1 mouse_genomes_project 18 30019181 30023583 + MGP_BALBcJ_P0049133 Tslp protein_coding protein_coding MGP_BALBcJ_T0049723.1 MGP_BALBcJ_G0024433.1 mouse_genomes_project 18 58137285 58141435 + MGP_BALBcJ_P0049723 Rps14 protein_coding protein_coding MGP_BALBcJ_T0049724.1 MGP_BALBcJ_G0024433.1 mouse_genomes_project 18 58137441 58140320 + Rps14 protein_coding retained_intron MGP_BALBcJ_T0049725.1 MGP_BALBcJ_G0024433.1 mouse_genomes_project 18 58137456 58141430 + MGP_BALBcJ_P0049725 Rps14 protein_coding protein_coding MGP_BALBcJ_T0049726.1 MGP_BALBcJ_G0024433.1 mouse_genomes_project 18 58138004 58140761 + MGP_BALBcJ_P0049726 Rps14 protein_coding protein_coding MGP_BALBcJ_T0049727.1 MGP_BALBcJ_G0024433.1 mouse_genomes_project 18 58138614 58141346 + MGP_BALBcJ_P0049727 Rps14 protein_coding protein_coding MGP_BALBcJ_T0049728.1 MGP_BALBcJ_G0024433.1 mouse_genomes_project 18 58139137 58141434 + MGP_BALBcJ_P0049728 Rps14 protein_coding protein_coding MGP_BALBcJ_T0017616.1 MGP_BALBcJ_G0015310.1 mouse_genomes_project 18 82302335 82304107 - D030046N08Rik processed_transcript processed_transcript MGP_BALBcJ_T0049322.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34006625 34014623 + Hars2 protein_coding processed_transcript MGP_BALBcJ_T0049323.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34006625 34016567 + MGP_BALBcJ_P0049323 Hars2 protein_coding protein_coding MGP_BALBcJ_T0049324.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34006848 34015699 + MGP_BALBcJ_P0049324 Hars2 protein_coding protein_coding MGP_BALBcJ_T0049325.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34006886 34010497 + Hars2 protein_coding retained_intron MGP_BALBcJ_T0049326.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34011016 34012267 + Hars2 protein_coding retained_intron MGP_BALBcJ_T0049327.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34011824 34014164 + Hars2 protein_coding retained_intron MGP_BALBcJ_T0049328.1 MGP_BALBcJ_G0024258.1 mouse_genomes_project 18 34014017 34015458 + Hars2 protein_coding retained_intron MGP_BALBcJ_T0049064.1 MGP_BALBcJ_G0024163.1 mouse_genomes_project 18 21283220 21306371 - MGP_BALBcJ_P0049064 Ino80c protein_coding protein_coding MGP_BALBcJ_T0049065.1 MGP_BALBcJ_G0024163.1 mouse_genomes_project 18 21283226 21306523 - MGP_BALBcJ_P0049065 Ino80c protein_coding protein_coding MGP_BALBcJ_T0049066.1 MGP_BALBcJ_G0024163.1 mouse_genomes_project 18 21284843 21306405 - MGP_BALBcJ_P0049066 Ino80c protein_coding protein_coding MGP_BALBcJ_T0099594.1 MGP_BALBcJ_G0037630.1 mouse_genomes_project 18 4682907 4683014 + Gm24292 snRNA snRNA MGP_BALBcJ_T0011441.1 MGP_BALBcJ_G0009566.1 mouse_genomes_project 18 57071945 57072239 - Gm26028 misc_RNA misc_RNA MGP_BALBcJ_T0010241.1 MGP_BALBcJ_G0008366.1 mouse_genomes_project 18 58495863 58495927 + Mir6983 miRNA miRNA MGP_BALBcJ_T0007007.1 MGP_BALBcJ_G0005757.1 mouse_genomes_project 18 51728847 51760252 + Redrum lincRNA lincRNA MGP_BALBcJ_T0049262.1 MGP_BALBcJ_G0024238.1 mouse_genomes_project 18 33040387 33072360 + MGP_BALBcJ_P0049262 Cxxc5 protein_coding protein_coding MGP_BALBcJ_T0049652.1 MGP_BALBcJ_G0024406.1 mouse_genomes_project 18 53771773 53844981 + MGP_BALBcJ_P0049652 Gramd3 protein_coding protein_coding MGP_BALBcJ_T0099617.1 MGP_BALBcJ_G0037653.1 mouse_genomes_project 18 60926924 60926987 + Gm23581 snRNA snRNA MGP_BALBcJ_T0010220.1 MGP_BALBcJ_G0008345.1 mouse_genomes_project 18 21630889 21630950 - Mir187 miRNA miRNA MGP_BALBcJ_T0003784.1 MGP_BALBcJ_G0003402.1 mouse_genomes_project 18 18847077 18850778 + 4930426D05Rik antisense antisense MGP_BALBcJ_T0003785.1 MGP_BALBcJ_G0003402.1 mouse_genomes_project 18 18847194 18850771 + 4930426D05Rik antisense antisense MGP_BALBcJ_T0003786.1 MGP_BALBcJ_G0003402.1 mouse_genomes_project 18 18848189 18850787 + 4930426D05Rik antisense antisense MGP_BALBcJ_T0003787.1 MGP_BALBcJ_G0003402.1 mouse_genomes_project 18 18848192 18851735 + 4930426D05Rik antisense antisense MGP_BALBcJ_T0049545.1 MGP_BALBcJ_G0024362.1 mouse_genomes_project 18 41472831 41479819 - MGP_BALBcJ_P0049545 Spinkl protein_coding protein_coding MGP_BALBcJ_T0049314.1 MGP_BALBcJ_G0024253.1 mouse_genomes_project 18 33965528 33967727 - MGP_BALBcJ_P0049314 Ndufa2 protein_coding protein_coding MGP_BALBcJ_T0049281.1 MGP_BALBcJ_G0024245.1 mouse_genomes_project 18 33747776 33760904 + MGP_BALBcJ_P0049281 Slc4a9 protein_coding protein_coding MGP_BALBcJ_T0049282.1 MGP_BALBcJ_G0024245.1 mouse_genomes_project 18 33747776 33760904 + MGP_BALBcJ_P0049282 Slc4a9 protein_coding protein_coding MGP_BALBcJ_T0048942.1 MGP_BALBcJ_G0024115.1 mouse_genomes_project 18 8785078 8890178 + MGP_BALBcJ_P0048942 Cables1 protein_coding protein_coding MGP_BALBcJ_T0049358.1 MGP_BALBcJ_G0024278.1 mouse_genomes_project 18 34517262 34520944 + MGP_BALBcJ_P0049358 Pcdhb3 protein_coding protein_coding MGP_BALBcJ_T0049570.1 MGP_BALBcJ_G0024371.1 mouse_genomes_project 18 43444490 43478940 - MGP_BALBcJ_P0049570 Trim36 protein_coding protein_coding MGP_BALBcJ_T0049571.1 MGP_BALBcJ_G0024371.1 mouse_genomes_project 18 43444490 43490876 - MGP_BALBcJ_P0049571 Trim36 protein_coding protein_coding MGP_BALBcJ_T0003780.1 MGP_BALBcJ_G0003398.1 mouse_genomes_project 18 9143339 9148234 + Gm15956 antisense antisense MGP_BALBcJ_T0100887.1 MGP_BALBcJ_G0038923.1 mouse_genomes_project 18 79548754 79548882 + Gm26012 snoRNA snoRNA MGP_BALBcJ_T0003810.1 MGP_BALBcJ_G0003423.1 mouse_genomes_project 18 59111448 59113315 + 1500015A07Rik antisense antisense MGP_BALBcJ_T0003811.1 MGP_BALBcJ_G0003423.1 mouse_genomes_project 18 59111491 59120903 + 1500015A07Rik antisense antisense MGP_BALBcJ_T0003812.1 MGP_BALBcJ_G0003423.1 mouse_genomes_project 18 59119344 59120895 + 1500015A07Rik antisense antisense MGP_BALBcJ_T0049269.1 MGP_BALBcJ_G0024240.1 mouse_genomes_project 18 33230355 33267577 - MGP_BALBcJ_P0049269 Nrg2 protein_coding unknown_likely_coding MGP_BALBcJ_T0049270.1 MGP_BALBcJ_G0024240.1 mouse_genomes_project 18 33231308 33414560 - MGP_BALBcJ_P0049270 Nrg2 protein_coding protein_coding MGP_BALBcJ_T0049271.1 MGP_BALBcJ_G0024240.1 mouse_genomes_project 18 33231308 33414560 - MGP_BALBcJ_P0049271 Nrg2 protein_coding protein_coding MGP_BALBcJ_T0049272.1 MGP_BALBcJ_G0024240.1 mouse_genomes_project 18 33241507 33414412 - MGP_BALBcJ_P0049272 Nrg2 protein_coding protein_coding MGP_BALBcJ_T0050106.1 MGP_BALBcJ_G0024553.1 mouse_genomes_project 18 77618576 77619269 - MGP_BALBcJ_P0050106 protein_coding protein_coding MGP_BALBcJ_T0049859.1 MGP_BALBcJ_G0024481.1 mouse_genomes_project 18 63424239 63445875 - MGP_BALBcJ_P0049859 Lman1 protein_coding protein_coding MGP_BALBcJ_T0049860.1 MGP_BALBcJ_G0024481.1 mouse_genomes_project 18 63426681 63445859 - MGP_BALBcJ_P0049860 Lman1 protein_coding protein_coding MGP_BALBcJ_T0049861.1 MGP_BALBcJ_G0024481.1 mouse_genomes_project 18 63432258 63438133 - Lman1 protein_coding processed_transcript MGP_BALBcJ_T0049862.1 MGP_BALBcJ_G0024481.1 mouse_genomes_project 18 63434381 63436890 - Lman1 protein_coding retained_intron MGP_BALBcJ_T0049863.1 MGP_BALBcJ_G0024481.1 mouse_genomes_project 18 63436367 63469602 - MGP_BALBcJ_P0049863 Lman1 protein_coding protein_coding MGP_BALBcJ_T0049864.1 MGP_BALBcJ_G0024481.1 mouse_genomes_project 18 63436820 63466977 - Lman1 protein_coding processed_transcript MGP_BALBcJ_T0050034.1 MGP_BALBcJ_G0024530.1 mouse_genomes_project 18 72581428 72856157 + MGP_BALBcJ_P0050034 Dym protein_coding protein_coding MGP_BALBcJ_T0050193.1 MGP_BALBcJ_G0024576.1 mouse_genomes_project 18 82524876 82573718 + MGP_BALBcJ_P0050193 Fbxo15 protein_coding protein_coding MGP_BALBcJ_T0050195.1 MGP_BALBcJ_G0024576.1 mouse_genomes_project 18 82541888 82573718 + MGP_BALBcJ_P0050195 Fbxo15 protein_coding unknown_likely_coding MGP_BALBcJ_T0011427.1 MGP_BALBcJ_G0009552.1 mouse_genomes_project 18 16749262 16749559 + Gm25392 misc_RNA misc_RNA MGP_BALBcJ_T0098552.1 MGP_BALBcJ_G0036606.1 mouse_genomes_project 18 35603002 35603099 + Gm24690 rRNA rRNA MGP_BALBcJ_T0049180.1 MGP_BALBcJ_G0024211.1 mouse_genomes_project 18 31796351 31803940 + MGP_BALBcJ_P0049180 Kif20a protein_coding unknown_likely_coding MGP_BALBcJ_T0050033.1 MGP_BALBcJ_G0024529.1 mouse_genomes_project 18 72568155 72572718 + MGP_BALBcJ_P0050033 BC031181 protein_coding protein_coding MGP_BALBcJ_T0049366.1 MGP_BALBcJ_G0024284.1 mouse_genomes_project 18 34613373 34617330 + MGP_BALBcJ_P0049366 Pcdhb9 protein_coding protein_coding MGP_BALBcJ_T0010235.1 MGP_BALBcJ_G0008360.1 mouse_genomes_project 18 55034283 55034379 + Gm44491 miRNA miRNA MGP_BALBcJ_T0049554.1 MGP_BALBcJ_G0024368.1 mouse_genomes_project 18 41715146 42109261 - MGP_BALBcJ_P0049554 Mcc protein_coding protein_coding MGP_BALBcJ_T0049555.1 MGP_BALBcJ_G0024368.1 mouse_genomes_project 18 41719696 41955855 - MGP_BALBcJ_P0049555 Mcc protein_coding protein_coding MGP_BALBcJ_T0049556.1 MGP_BALBcJ_G0024368.1 mouse_genomes_project 18 41805816 41808479 - Mcc protein_coding retained_intron MGP_BALBcJ_T0049557.1 MGP_BALBcJ_G0024368.1 mouse_genomes_project 18 41952155 41955873 - Mcc protein_coding retained_intron MGP_BALBcJ_T0049558.1 MGP_BALBcJ_G0024368.1 mouse_genomes_project 18 42012249 42025409 - Mcc protein_coding processed_transcript MGP_BALBcJ_T0049642.1 MGP_BALBcJ_G0024399.1 mouse_genomes_project 18 50506688 50550783 + MGP_BALBcJ_P0049642 Snx2 protein_coding protein_coding MGP_BALBcJ_T0010254.1 MGP_BALBcJ_G0008379.1 mouse_genomes_project 18 78462601 78462697 - Gm25071 miRNA miRNA MGP_BALBcJ_T0049582.1 MGP_BALBcJ_G0024378.1 mouse_genomes_project 18 43989719 44009115 - MGP_BALBcJ_P0049582 Cdo1 protein_coding protein_coding MGP_BALBcJ_T0049451.1 MGP_BALBcJ_G0024326.1 mouse_genomes_project 18 35422306 35448443 - MGP_BALBcJ_P0049451 Pcdh1 protein_coding protein_coding MGP_BALBcJ_T0049452.1 MGP_BALBcJ_G0024326.1 mouse_genomes_project 18 35425279 35439562 - MGP_BALBcJ_P0049452 Pcdh1 protein_coding protein_coding MGP_BALBcJ_T0049453.1 MGP_BALBcJ_G0024326.1 mouse_genomes_project 18 35433088 35446157 - MGP_BALBcJ_P0049453 Pcdh1 protein_coding protein_coding MGP_BALBcJ_T0049454.1 MGP_BALBcJ_G0024326.1 mouse_genomes_project 18 35433088 35448367 - MGP_BALBcJ_P0049454 Pcdh1 protein_coding protein_coding MGP_BALBcJ_T0049455.1 MGP_BALBcJ_G0024326.1 mouse_genomes_project 18 35439842 35446949 - MGP_BALBcJ_P0049455 Pcdh1 protein_coding protein_coding MGP_BALBcJ_T0049456.1 MGP_BALBcJ_G0024326.1 mouse_genomes_project 18 35439842 35440239 - MGP_BALBcJ_P0049456 Pcdh1 protein_coding protein_coding MGP_BALBcJ_T0049050.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20937354 20959955 + Mapre2 protein_coding retained_intron MGP_BALBcJ_T0049051.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20937360 21061451 + MGP_BALBcJ_P0049051 Mapre2 protein_coding protein_coding MGP_BALBcJ_T0049052.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20937414 21038210 + MGP_BALBcJ_P0049052 Mapre2 protein_coding protein_coding MGP_BALBcJ_T0049053.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20938746 21070119 + MGP_BALBcJ_P0049053 Mapre2 protein_coding protein_coding MGP_BALBcJ_T0049054.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20938769 20976072 + Mapre2 protein_coding processed_transcript MGP_BALBcJ_T0049055.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20982111 21011380 + Mapre2 protein_coding retained_intron MGP_BALBcJ_T0049056.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20982194 21071617 + MGP_BALBcJ_P0049056 Mapre2 protein_coding protein_coding MGP_BALBcJ_T0049057.1 MGP_BALBcJ_G0024158.1 mouse_genomes_project 18 20982194 21068686 + MGP_BALBcJ_P0049057 Mapre2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0099618.1 MGP_BALBcJ_G0037654.1 mouse_genomes_project 18 60998459 60998564 + Gm24848 snRNA snRNA MGP_BALBcJ_T0049628.1 MGP_BALBcJ_G0024393.1 mouse_genomes_project 18 49765169 49790911 + MGP_BALBcJ_P0049628 Srfbp1 protein_coding protein_coding MGP_BALBcJ_T0006989.1 MGP_BALBcJ_G0005743.1 mouse_genomes_project 18 29078381 29080849 - Gm26823 lincRNA lincRNA MGP_BALBcJ_T0007014.1 MGP_BALBcJ_G0005762.1 mouse_genomes_project 18 59030725 59046607 - Carmn lincRNA lincRNA MGP_BALBcJ_T0007015.1 MGP_BALBcJ_G0005762.1 mouse_genomes_project 18 59032074 59046654 - Carmn lincRNA lincRNA MGP_BALBcJ_T0049681.1 MGP_BALBcJ_G0024416.1 mouse_genomes_project 18 54886901 55083990 + MGP_BALBcJ_P0049681 1700011I03Rik protein_coding protein_coding MGP_BALBcJ_T0049682.1 MGP_BALBcJ_G0024416.1 mouse_genomes_project 18 54886950 55083990 + MGP_BALBcJ_P0049682 1700011I03Rik protein_coding protein_coding MGP_BALBcJ_T0049683.1 MGP_BALBcJ_G0024416.1 mouse_genomes_project 18 54887003 54919311 + MGP_BALBcJ_P0049683 1700011I03Rik protein_coding protein_coding MGP_BALBcJ_T0049684.1 MGP_BALBcJ_G0024416.1 mouse_genomes_project 18 54915540 55083931 + MGP_BALBcJ_P0049684 1700011I03Rik protein_coding protein_coding MGP_BALBcJ_T0049550.1 MGP_BALBcJ_G0024366.1 mouse_genomes_project 18 41626954 41649358 + MGP_BALBcJ_P0049550 Myot protein_coding protein_coding MGP_BALBcJ_T0049551.1 MGP_BALBcJ_G0024366.1 mouse_genomes_project 18 41626954 41649358 + MGP_BALBcJ_P0049551 Myot protein_coding protein_coding MGP_BALBcJ_T0049233.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32794559 32813867 + MGP_BALBcJ_P0049233 Paip2 protein_coding protein_coding MGP_BALBcJ_T0049234.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32794566 32813031 + MGP_BALBcJ_P0049234 Paip2 protein_coding protein_coding MGP_BALBcJ_T0049235.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32794583 32813200 + MGP_BALBcJ_P0049235 Paip2 protein_coding protein_coding MGP_BALBcJ_T0049236.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32794591 32813864 + MGP_BALBcJ_P0049236 Paip2 protein_coding protein_coding MGP_BALBcJ_T0049237.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32795179 32813076 + MGP_BALBcJ_P0049237 Paip2 protein_coding protein_coding MGP_BALBcJ_T0049238.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32806226 32809368 + Paip2 protein_coding retained_intron MGP_BALBcJ_T0049239.1 MGP_BALBcJ_G0024228.1 mouse_genomes_project 18 32806927 32809817 + Paip2 protein_coding retained_intron MGP_BALBcJ_T0049144.1 MGP_BALBcJ_G0024201.1 mouse_genomes_project 18 30953771 31164113 - MGP_BALBcJ_P0049144 Epb41l4a protein_coding protein_coding MGP_BALBcJ_T0050206.1 MGP_BALBcJ_G0024582.1 mouse_genomes_project 18 86782705 86858218 + MGP_BALBcJ_P0050206 Cd226 protein_coding protein_coding MGP_BALBcJ_T0050207.1 MGP_BALBcJ_G0024582.1 mouse_genomes_project 18 86782772 86857178 + MGP_BALBcJ_P0050207 Cd226 protein_coding protein_coding MGP_BALBcJ_T0011431.1 MGP_BALBcJ_G0009556.1 mouse_genomes_project 18 29512489 29512797 + Gm22325 misc_RNA misc_RNA MGP_BALBcJ_T0049074.1 MGP_BALBcJ_G0024165.1 mouse_genomes_project 18 21673297 21680198 + MGP_BALBcJ_P0049074 2700062C07Rik protein_coding protein_coding MGP_BALBcJ_T0049816.1 MGP_BALBcJ_G0024467.1 mouse_genomes_project 18 61666045 61689549 + MGP_BALBcJ_P0049816 St8sia3 protein_coding protein_coding MGP_BALBcJ_T0049817.1 MGP_BALBcJ_G0024467.1 mouse_genomes_project 18 61677572 61685198 + MGP_BALBcJ_P0049817 St8sia3 protein_coding unknown_likely_coding MGP_BALBcJ_T0049818.1 MGP_BALBcJ_G0024467.1 mouse_genomes_project 18 61679005 61683380 + MGP_BALBcJ_P0049818 St8sia3 protein_coding protein_coding MGP_BALBcJ_T0049819.1 MGP_BALBcJ_G0024467.1 mouse_genomes_project 18 61679186 61683237 + St8sia3 protein_coding processed_transcript MGP_BALBcJ_T0049820.1 MGP_BALBcJ_G0024467.1 mouse_genomes_project 18 61679817 61683309 + St8sia3 protein_coding retained_intron MGP_BALBcJ_T0049360.1 MGP_BALBcJ_G0024280.1 mouse_genomes_project 18 34536767 34540400 + MGP_BALBcJ_P0049360 Pcdhb5 protein_coding protein_coding MGP_BALBcJ_T0049344.1 MGP_BALBcJ_G0024269.1 mouse_genomes_project 18 34217498 34406362 + MGP_BALBcJ_P0049344 Pcdha8 protein_coding protein_coding MGP_BALBcJ_T0007006.1 MGP_BALBcJ_G0005756.1 mouse_genomes_project 18 47088326 47102927 - 1700065O20Rik lincRNA lincRNA MGP_BALBcJ_T0050051.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74485421 74526689 + MGP_BALBcJ_P0050051 Hdhd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050053.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499401 74527411 + MGP_BALBcJ_P0050053 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050054.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499401 74517325 + MGP_BALBcJ_P0050054 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050055.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499412 74526689 + MGP_BALBcJ_P0050055 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050056.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499412 74517325 + MGP_BALBcJ_P0050056 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050057.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499437 74512175 + MGP_BALBcJ_P0050057 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050058.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499670 74528142 + MGP_BALBcJ_P0050058 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050059.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499670 74510337 + MGP_BALBcJ_P0050059 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050060.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499704 74527411 + MGP_BALBcJ_P0050060 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0050061.1 MGP_BALBcJ_G0024536.1 mouse_genomes_project 18 74499723 74528142 + MGP_BALBcJ_P0050061 Hdhd2 protein_coding protein_coding MGP_BALBcJ_T0049240.1 MGP_BALBcJ_G0024229.1 mouse_genomes_project 18 32810546 32824364 - MGP_BALBcJ_P0049240 Slc23a1 protein_coding protein_coding MGP_BALBcJ_T0049241.1 MGP_BALBcJ_G0024229.1 mouse_genomes_project 18 32816054 32824316 - MGP_BALBcJ_P0049241 Slc23a1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049242.1 MGP_BALBcJ_G0024229.1 mouse_genomes_project 18 32816750 32819287 - Slc23a1 protein_coding processed_transcript MGP_BALBcJ_T0049243.1 MGP_BALBcJ_G0024229.1 mouse_genomes_project 18 32819504 32824356 - Slc23a1 protein_coding processed_transcript MGP_BALBcJ_T0049039.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 19894377 20233119 - MGP_BALBcJ_P0049039 Nol4 protein_coding protein_coding MGP_BALBcJ_T0049040.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 19894387 20059748 - MGP_BALBcJ_P0049040 Nol4 protein_coding protein_coding MGP_BALBcJ_T0049041.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 19894587 20231734 - MGP_BALBcJ_P0049041 Nol4 protein_coding protein_coding MGP_BALBcJ_T0049042.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 19895504 20059748 - MGP_BALBcJ_P0049042 Nol4 protein_coding protein_coding MGP_BALBcJ_T0049043.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 19895730 20233155 - MGP_BALBcJ_P0049043 Nol4 protein_coding protein_coding MGP_BALBcJ_T0049044.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 20032265 20036452 - Nol4 protein_coding processed_transcript MGP_BALBcJ_T0049045.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 20116802 20232017 - MGP_BALBcJ_P0049045 Nol4 protein_coding protein_coding MGP_BALBcJ_T0049046.1 MGP_BALBcJ_G0024156.1 mouse_genomes_project 18 20126014 20156461 - Nol4 protein_coding processed_transcript MGP_BALBcJ_T0049989.1 MGP_BALBcJ_G0024513.1 mouse_genomes_project 18 68783383 69894819 - MGP_BALBcJ_P0049989 Dcc protein_coding protein_coding MGP_BALBcJ_T0049990.1 MGP_BALBcJ_G0024513.1 mouse_genomes_project 18 68783635 69894767 - MGP_BALBcJ_P0049990 Dcc protein_coding protein_coding MGP_BALBcJ_T0049991.1 MGP_BALBcJ_G0024513.1 mouse_genomes_project 18 69488124 69894791 - Dcc protein_coding retained_intron MGP_BALBcJ_T0049244.1 MGP_BALBcJ_G0024230.1 mouse_genomes_project 18 32845254 32847356 - MGP_BALBcJ_P0049244 Mzb1 protein_coding protein_coding MGP_BALBcJ_T0001002.1 MGP_BALBcJ_G0000930.1 mouse_genomes_project 18 52652621 52653053 + TEC TEC MGP_BALBcJ_T0049674.1 MGP_BALBcJ_G0024412.1 mouse_genomes_project 18 54307425 54326839 - MGP_BALBcJ_P0049674 C330018D20Rik protein_coding protein_coding MGP_BALBcJ_T0049675.1 MGP_BALBcJ_G0024412.1 mouse_genomes_project 18 54309206 54326825 - MGP_BALBcJ_P0049675 C330018D20Rik protein_coding protein_coding MGP_BALBcJ_T0049676.1 MGP_BALBcJ_G0024412.1 mouse_genomes_project 18 54319990 54326717 - C330018D20Rik protein_coding processed_transcript MGP_BALBcJ_T0049710.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57956845 57987438 - MGP_BALBcJ_P0049710 Synpo protein_coding protein_coding MGP_BALBcJ_T0049711.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57956854 57987675 - MGP_BALBcJ_P0049711 Synpo protein_coding protein_coding MGP_BALBcJ_T0049712.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57956862 57992943 - MGP_BALBcJ_P0049712 Synpo protein_coding protein_coding MGP_BALBcJ_T0049713.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57956863 57963370 - Synpo protein_coding processed_transcript MGP_BALBcJ_T0049714.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57963078 57987338 - MGP_BALBcJ_P0049714 Synpo protein_coding protein_coding MGP_BALBcJ_T0049715.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57963079 57972898 - MGP_BALBcJ_P0049715 Synpo protein_coding protein_coding MGP_BALBcJ_T0049716.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57963081 58011608 - MGP_BALBcJ_P0049716 Synpo protein_coding protein_coding MGP_BALBcJ_T0049717.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57966981 57986427 - MGP_BALBcJ_P0049717 Synpo protein_coding protein_coding MGP_BALBcJ_T0049718.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57967132 57987364 - Synpo protein_coding processed_transcript MGP_BALBcJ_T0049719.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57968751 58023389 - Synpo protein_coding processed_transcript MGP_BALBcJ_T0049720.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 57992587 58011561 - Synpo protein_coding processed_transcript MGP_BALBcJ_T0049721.1 MGP_BALBcJ_G0024431.1 mouse_genomes_project 18 58008902 58011561 - Synpo protein_coding processed_transcript MGP_BALBcJ_T0049318.1 MGP_BALBcJ_G0024256.1 mouse_genomes_project 18 33986858 33989397 - Dnd1 protein_coding retained_intron MGP_BALBcJ_T0049319.1 MGP_BALBcJ_G0024256.1 mouse_genomes_project 18 33986860 33989381 - MGP_BALBcJ_P0049319 Dnd1 protein_coding protein_coding MGP_BALBcJ_T0049320.1 MGP_BALBcJ_G0024256.1 mouse_genomes_project 18 33986862 33989381 - Dnd1 protein_coding retained_intron MGP_BALBcJ_T0049134.1 MGP_BALBcJ_G0024196.1 mouse_genomes_project 18 30040624 30069790 + MGP_BALBcJ_P0049134 Wdr36 protein_coding protein_coding MGP_BALBcJ_T0049135.1 MGP_BALBcJ_G0024196.1 mouse_genomes_project 18 30040624 30069860 + MGP_BALBcJ_P0049135 Wdr36 protein_coding protein_coding MGP_BALBcJ_T0006999.1 MGP_BALBcJ_G0005751.1 mouse_genomes_project 18 34859480 34860332 + 4930517L18Rik lincRNA lincRNA MGP_BALBcJ_T0049646.1 MGP_BALBcJ_G0024402.1 mouse_genomes_project 18 50794923 50897681 + MGP_BALBcJ_P0049646 Prdm6 protein_coding protein_coding MGP_BALBcJ_T0049647.1 MGP_BALBcJ_G0024402.1 mouse_genomes_project 18 50795406 50898469 + MGP_BALBcJ_P0049647 Prdm6 protein_coding protein_coding MGP_BALBcJ_T0049648.1 MGP_BALBcJ_G0024402.1 mouse_genomes_project 18 50880273 50898469 + MGP_BALBcJ_P0049648 Prdm6 protein_coding protein_coding MGP_BALBcJ_T0010232.1 MGP_BALBcJ_G0008357.1 mouse_genomes_project 18 53297284 53297373 - Gm23335 miRNA miRNA MGP_BALBcJ_T0011447.1 MGP_BALBcJ_G0009572.1 mouse_genomes_project 18 82321794 82322084 - Gm22014 misc_RNA misc_RNA MGP_BALBcJ_T0049625.1 MGP_BALBcJ_G0024390.1 mouse_genomes_project 18 48418803 48611163 + MGP_BALBcJ_P0049625 Prr16 protein_coding protein_coding MGP_BALBcJ_T0099607.1 MGP_BALBcJ_G0037643.1 mouse_genomes_project 18 43750919 43751013 - Gm24076 snRNA snRNA MGP_BALBcJ_T0010256.1 MGP_BALBcJ_G0008381.1 mouse_genomes_project 18 80299393 80299453 + Mir5112 miRNA miRNA MGP_BALBcJ_T0017581.1 MGP_BALBcJ_G0015299.1 mouse_genomes_project 18 34980579 34990637 - Gm26672 processed_transcript antisense MGP_BALBcJ_T0017582.1 MGP_BALBcJ_G0015299.1 mouse_genomes_project 18 34986777 35002283 - Gm26672 processed_transcript antisense MGP_BALBcJ_T0017583.1 MGP_BALBcJ_G0015299.1 mouse_genomes_project 18 34986930 35002984 - Gm26672 processed_transcript antisense MGP_BALBcJ_T0017584.1 MGP_BALBcJ_G0015299.1 mouse_genomes_project 18 34989499 34991031 - Gm26672 processed_transcript retained_intron MGP_BALBcJ_T0050097.1 MGP_BALBcJ_G0024547.1 mouse_genomes_project 18 75470317 75567697 + MGP_BALBcJ_P0050097 Epg5 protein_coding protein_coding MGP_BALBcJ_T0050170.1 MGP_BALBcJ_G0024569.1 mouse_genomes_project 18 81588567 81664254 - MGP_BALBcJ_P0050170 Tshz1 protein_coding protein_coding MGP_BALBcJ_T0050171.1 MGP_BALBcJ_G0024569.1 mouse_genomes_project 18 81589022 81664240 - Tshz1 protein_coding processed_transcript MGP_BALBcJ_T0013338.1 MGP_BALBcJ_G0011435.1 mouse_genomes_project 18 71842598 71843006 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0048911.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6854411 6889302 - MGP_BALBcJ_P0048911 Usp14 protein_coding protein_coding MGP_BALBcJ_T0048912.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6854573 6889228 - MGP_BALBcJ_P0048912 Usp14 protein_coding protein_coding MGP_BALBcJ_T0048913.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6855879 6859512 - Usp14 protein_coding retained_intron MGP_BALBcJ_T0048914.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6860762 6867394 - Usp14 protein_coding retained_intron MGP_BALBcJ_T0048915.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6868338 6889242 - Usp14 protein_coding retained_intron MGP_BALBcJ_T0048916.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6870986 6876386 - Usp14 protein_coding retained_intron MGP_BALBcJ_T0048917.1 MGP_BALBcJ_G0024106.1 mouse_genomes_project 18 6883311 6889183 - Usp14 protein_coding retained_intron MGP_BALBcJ_T0048939.1 MGP_BALBcJ_G0024113.1 mouse_genomes_project 18 7922872 7958414 + MGP_BALBcJ_P0048939 Gata6 protein_coding protein_coding MGP_BALBcJ_T0049112.1 MGP_BALBcJ_G0024181.1 mouse_genomes_project 18 28977566 29003704 + MGP_BALBcJ_P0049112 Ammecr1l protein_coding protein_coding MGP_BALBcJ_T0049363.1 MGP_BALBcJ_G0024282.1 mouse_genomes_project 18 34557555 34562363 + MGP_BALBcJ_P0049363 Pcdhb7 protein_coding protein_coding MGP_BALBcJ_T0048926.1 MGP_BALBcJ_G0024109.1 mouse_genomes_project 18 7441579 7468838 - Esco1 protein_coding processed_transcript MGP_BALBcJ_T0048927.1 MGP_BALBcJ_G0024109.1 mouse_genomes_project 18 7441588 7485832 - MGP_BALBcJ_P0048927 Esco1 protein_coding protein_coding MGP_BALBcJ_T0048928.1 MGP_BALBcJ_G0024109.1 mouse_genomes_project 18 7441596 7486055 - MGP_BALBcJ_P0048928 Esco1 protein_coding protein_coding MGP_BALBcJ_T0048929.1 MGP_BALBcJ_G0024109.1 mouse_genomes_project 18 7441596 7485812 - MGP_BALBcJ_P0048929 Esco1 protein_coding protein_coding MGP_BALBcJ_T0048930.1 MGP_BALBcJ_G0024109.1 mouse_genomes_project 18 7441607 7485812 - Esco1 protein_coding processed_transcript MGP_BALBcJ_T0049624.1 MGP_BALBcJ_G0024389.1 mouse_genomes_project 18 47864198 47865242 - MGP_BALBcJ_P0049624 Hdhd1a protein_coding protein_coding MGP_BALBcJ_T0048943.1 MGP_BALBcJ_G0024116.1 mouse_genomes_project 18 8926750 9067056 - MGP_BALBcJ_P0048943 Tmem241 protein_coding protein_coding MGP_BALBcJ_T0048944.1 MGP_BALBcJ_G0024116.1 mouse_genomes_project 18 8928977 9067028 - MGP_BALBcJ_P0048944 Tmem241 protein_coding protein_coding MGP_BALBcJ_T0048945.1 MGP_BALBcJ_G0024116.1 mouse_genomes_project 18 9012546 9067056 - MGP_BALBcJ_P0048945 Tmem241 protein_coding protein_coding MGP_BALBcJ_T0049015.1 MGP_BALBcJ_G0024142.1 mouse_genomes_project 18 17572384 17608147 + MGP_BALBcJ_P0049015 Dsg4 protein_coding protein_coding MGP_BALBcJ_T0010234.1 MGP_BALBcJ_G0008359.1 mouse_genomes_project 18 53881243 53881303 + Mir1258 miRNA miRNA MGP_BALBcJ_T0099612.1 MGP_BALBcJ_G0037648.1 mouse_genomes_project 18 49469934 49470041 - Gm22259 snRNA snRNA MGP_BALBcJ_T0049370.1 MGP_BALBcJ_G0024288.1 mouse_genomes_project 18 34662113 34665823 + MGP_BALBcJ_P0049370 Pcdhb13 protein_coding protein_coding MGP_BALBcJ_T0049504.1 MGP_BALBcJ_G0024340.1 mouse_genomes_project 18 39153371 39228814 - MGP_BALBcJ_P0049504 Prelid2 protein_coding protein_coding MGP_BALBcJ_T0050211.1 MGP_BALBcJ_G0024585.1 mouse_genomes_project 18 88152341 88164980 + MGP_BALBcJ_P0050211 unknown_likely_coding unknown_likely_coding MGP_BALBcJ_T0049274.1 MGP_BALBcJ_G0024242.1 mouse_genomes_project 18 33569310 33590794 + MGP_BALBcJ_P0049274 Cystm1 protein_coding protein_coding MGP_BALBcJ_T0049275.1 MGP_BALBcJ_G0024242.1 mouse_genomes_project 18 33572394 33627092 + MGP_BALBcJ_P0049275 Cystm1 protein_coding protein_coding MGP_BALBcJ_T0049276.1 MGP_BALBcJ_G0024242.1 mouse_genomes_project 18 33572460 33592329 + Cystm1 protein_coding retained_intron MGP_BALBcJ_T0049277.1 MGP_BALBcJ_G0024242.1 mouse_genomes_project 18 33572471 33617431 + MGP_BALBcJ_P0049277 Cystm1 protein_coding protein_coding MGP_BALBcJ_T0049278.1 MGP_BALBcJ_G0024242.1 mouse_genomes_project 18 33589854 33626652 + MGP_BALBcJ_P0049278 Cystm1 protein_coding protein_coding MGP_BALBcJ_T0049119.1 MGP_BALBcJ_G0024187.1 mouse_genomes_project 18 29163620 29170267 - MGP_BALBcJ_P0049119 Gpr17 protein_coding protein_coding MGP_BALBcJ_T0050102.1 MGP_BALBcJ_G0024550.1 mouse_genomes_project 18 75683146 75745304 - MGP_BALBcJ_P0050102 Slc14a2 protein_coding protein_coding MGP_BALBcJ_T0050103.1 MGP_BALBcJ_G0024550.1 mouse_genomes_project 18 75719275 75742650 - MGP_BALBcJ_P0050103 Slc14a2 protein_coding protein_coding MGP_BALBcJ_T0049346.1 MGP_BALBcJ_G0024271.1 mouse_genomes_project 18 34232212 34406362 + MGP_BALBcJ_P0049346 Pcdha11 protein_coding protein_coding MGP_BALBcJ_T0017613.1 MGP_BALBcJ_G0015308.1 mouse_genomes_project 18 72937063 72938831 - Gm20544 processed_transcript processed_transcript MGP_BALBcJ_T0049506.1 MGP_BALBcJ_G0024342.1 mouse_genomes_project 18 39332970 39442421 + MGP_BALBcJ_P0049506 Sh3rf2 protein_coding unknown_likely_coding MGP_BALBcJ_T0049507.1 MGP_BALBcJ_G0024342.1 mouse_genomes_project 18 39334118 39444646 + MGP_BALBcJ_P0049507 Sh3rf2 protein_coding protein_coding MGP_BALBcJ_T0049508.1 MGP_BALBcJ_G0024342.1 mouse_genomes_project 18 39427176 39442320 + Sh3rf2 protein_coding processed_transcript MGP_BALBcJ_T0049509.1 MGP_BALBcJ_G0024342.1 mouse_genomes_project 18 39427264 39439334 + Sh3rf2 protein_coding processed_transcript MGP_BALBcJ_T0011424.1 MGP_BALBcJ_G0009549.1 mouse_genomes_project 18 13021599 13021900 + Gm22389 misc_RNA misc_RNA MGP_BALBcJ_T0048845.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2450692 2626575 + MGP_BALBcJ_P0048845 Zeb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048846.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2450692 2570331 + Zeb1 protein_coding retained_intron MGP_BALBcJ_T0048847.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2450692 2626921 + MGP_BALBcJ_P0048847 Zeb1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048848.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2450692 2626538 + MGP_BALBcJ_P0048848 Zeb1 protein_coding protein_coding MGP_BALBcJ_T0048849.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2452054 2505465 + Zeb1 protein_coding processed_transcript MGP_BALBcJ_T0048850.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2452348 2618813 + MGP_BALBcJ_P0048850 Zeb1 protein_coding protein_coding MGP_BALBcJ_T0048851.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2452607 2618940 + Zeb1 protein_coding processed_transcript MGP_BALBcJ_T0048852.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2452949 2627747 + Zeb1 protein_coding retained_intron MGP_BALBcJ_T0048853.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2462388 2506905 + Zeb1 protein_coding processed_transcript MGP_BALBcJ_T0048854.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2497318 2634918 + MGP_BALBcJ_P0048854 Zeb1 protein_coding protein_coding MGP_BALBcJ_T0048855.1 MGP_BALBcJ_G0024089.1 mouse_genomes_project 18 2615797 2632803 + Zeb1 protein_coding processed_transcript MGP_BALBcJ_T0013286.1 MGP_BALBcJ_G0011383.1 mouse_genomes_project 18 6603936 6604939 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013296.1 MGP_BALBcJ_G0011393.1 mouse_genomes_project 18 12004088 12004535 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049374.1 MGP_BALBcJ_G0024292.1 mouse_genomes_project 18 34705511 34710172 + MGP_BALBcJ_P0049374 Pcdhb17 protein_coding protein_coding MGP_BALBcJ_T0049250.1 MGP_BALBcJ_G0024233.1 mouse_genomes_project 18 32868968 32902375 - MGP_BALBcJ_P0049250 Dnajc18 protein_coding protein_coding MGP_BALBcJ_T0010226.1 MGP_BALBcJ_G0008351.1 mouse_genomes_project 18 35090145 35090201 - Mir6979 miRNA miRNA MGP_BALBcJ_T0049687.1 MGP_BALBcJ_G0024419.1 mouse_genomes_project 18 55902083 55959217 + MGP_BALBcJ_P0049687 Slc27a6 protein_coding protein_coding MGP_BALBcJ_T0003794.1 MGP_BALBcJ_G0003409.1 mouse_genomes_project 18 34390816 34391255 - Gm38097 antisense antisense MGP_BALBcJ_T0098550.1 MGP_BALBcJ_G0036604.1 mouse_genomes_project 18 31682520 31682637 + n-R5s24 rRNA rRNA MGP_BALBcJ_T0010219.1 MGP_BALBcJ_G0008344.1 mouse_genomes_project 18 9673176 9673261 + Mir1948 miRNA miRNA MGP_BALBcJ_T0049248.1 MGP_BALBcJ_G0024232.1 mouse_genomes_project 18 32854678 32860176 - MGP_BALBcJ_P0049248 Spata24 protein_coding protein_coding MGP_BALBcJ_T0049249.1 MGP_BALBcJ_G0024232.1 mouse_genomes_project 18 32858006 32860176 - MGP_BALBcJ_P0049249 Spata24 protein_coding protein_coding MGP_BALBcJ_T0010242.1 MGP_BALBcJ_G0008367.1 mouse_genomes_project 18 58776286 58776399 + Gm25301 miRNA miRNA MGP_BALBcJ_T0049192.1 MGP_BALBcJ_G0024215.1 mouse_genomes_project 18 31910511 31911874 + MGP_BALBcJ_P0049192 Gm3550 protein_coding protein_coding MGP_BALBcJ_T0049858.1 MGP_BALBcJ_G0024480.1 mouse_genomes_project 18 63396633 63413810 - MGP_BALBcJ_P0049858 Cplx4 protein_coding protein_coding MGP_BALBcJ_T0049415.1 MGP_BALBcJ_G0024320.1 mouse_genomes_project 18 35055033 35077409 + MGP_BALBcJ_P0049415 Pcdhgc5 protein_coding protein_coding MGP_BALBcJ_T0049416.1 MGP_BALBcJ_G0024320.1 mouse_genomes_project 18 35055072 35075587 + MGP_BALBcJ_P0049416 Pcdhgc5 protein_coding protein_coding MGP_BALBcJ_T0049417.1 MGP_BALBcJ_G0024320.1 mouse_genomes_project 18 35055086 35075736 + MGP_BALBcJ_P0049417 Pcdhgc5 protein_coding protein_coding MGP_BALBcJ_T0049418.1 MGP_BALBcJ_G0024320.1 mouse_genomes_project 18 35055174 35075700 + Pcdhgc5 protein_coding retained_intron MGP_BALBcJ_T0050122.1 MGP_BALBcJ_G0024558.1 mouse_genomes_project 18 77769475 77786972 - MGP_BALBcJ_P0050122 Hsbp1l1 protein_coding protein_coding MGP_BALBcJ_T0048918.1 MGP_BALBcJ_G0024107.1 mouse_genomes_project 18 6923526 7056277 - MGP_BALBcJ_P0048918 Rock1 protein_coding protein_coding MGP_BALBcJ_T0049587.1 MGP_BALBcJ_G0024382.1 mouse_genomes_project 18 44245767 44376324 + MGP_BALBcJ_P0049587 Commd10 protein_coding protein_coding MGP_BALBcJ_T0013290.1 MGP_BALBcJ_G0011387.1 mouse_genomes_project 18 9241457 9243870 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003781.1 MGP_BALBcJ_G0003399.1 mouse_genomes_project 18 9454809 9458046 - Gm29200 antisense antisense MGP_BALBcJ_T0049082.1 MGP_BALBcJ_G0024170.1 mouse_genomes_project 18 21914791 21915100 - MGP_BALBcJ_P0049082 Gm9955 protein_coding protein_coding MGP_BALBcJ_T0048965.1 MGP_BALBcJ_G0024121.1 mouse_genomes_project 18 9285858 9538058 + MGP_BALBcJ_P0048965 Lama3 protein_coding protein_coding MGP_BALBcJ_T0048966.1 MGP_BALBcJ_G0024121.1 mouse_genomes_project 18 9286063 9537708 + MGP_BALBcJ_P0048966 Lama3 protein_coding unknown_likely_coding MGP_BALBcJ_T0048967.1 MGP_BALBcJ_G0024121.1 mouse_genomes_project 18 9457818 9538058 + MGP_BALBcJ_P0048967 Lama3 protein_coding protein_coding MGP_BALBcJ_T0050019.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72000602 72177916 + MGP_BALBcJ_P0050019 Myo5b protein_coding protein_coding MGP_BALBcJ_T0050020.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72000630 72072754 + Myo5b protein_coding processed_transcript MGP_BALBcJ_T0050021.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72002205 72327799 + MGP_BALBcJ_P0050021 Myo5b protein_coding protein_coding MGP_BALBcJ_T0050022.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72002273 72227375 + Myo5b protein_coding processed_transcript MGP_BALBcJ_T0050023.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72002275 72327111 + MGP_BALBcJ_P0050023 Myo5b protein_coding protein_coding MGP_BALBcJ_T0050024.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72197878 72208554 + Myo5b protein_coding processed_transcript MGP_BALBcJ_T0050025.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72275809 72286013 + Myo5b protein_coding processed_transcript MGP_BALBcJ_T0050026.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72282556 72286006 + MGP_BALBcJ_P0050026 Myo5b protein_coding protein_coding MGP_BALBcJ_T0050027.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72283726 72286004 + Myo5b protein_coding retained_intron MGP_BALBcJ_T0050028.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72284515 72291395 + Myo5b protein_coding processed_transcript MGP_BALBcJ_T0050029.1 MGP_BALBcJ_G0024525.1 mouse_genomes_project 18 72302695 72327783 + Myo5b protein_coding retained_intron MGP_BALBcJ_T0011433.1 MGP_BALBcJ_G0009558.1 mouse_genomes_project 18 35847276 35847347 + Gm27369 misc_RNA misc_RNA MGP_BALBcJ_T0006976.1 MGP_BALBcJ_G0005734.1 mouse_genomes_project 18 1669874 1708445 + lincRNA lincRNA MGP_BALBcJ_T0048829.1 MGP_BALBcJ_G0024086.1 mouse_genomes_project 18 1499553 1541296 + MGP_BALBcJ_P0048829 9430020K01Rik protein_coding protein_coding MGP_BALBcJ_T0048882.1 MGP_BALBcJ_G0024094.1 mouse_genomes_project 18 3633179 3658102 + MGP_BALBcJ_P0048882 Rab18 protein_coding protein_coding MGP_BALBcJ_T0049209.1 MGP_BALBcJ_G0024225.1 mouse_genomes_project 18 32724090 32724459 + MGP_BALBcJ_P0049209 Gm5239 protein_coding protein_coding MGP_BALBcJ_T0050077.1 MGP_BALBcJ_G0024541.1 mouse_genomes_project 18 74839370 75003048 + MGP_BALBcJ_P0050077 Loxhd1 protein_coding protein_coding MGP_BALBcJ_T0050078.1 MGP_BALBcJ_G0024541.1 mouse_genomes_project 18 74864782 74941904 + MGP_BALBcJ_P0050078 Loxhd1 protein_coding protein_coding MGP_BALBcJ_T0050079.1 MGP_BALBcJ_G0024541.1 mouse_genomes_project 18 74890409 74970836 + MGP_BALBcJ_P0050079 Loxhd1 protein_coding protein_coding MGP_BALBcJ_T0050080.1 MGP_BALBcJ_G0024541.1 mouse_genomes_project 18 74934696 75003132 + MGP_BALBcJ_P0050080 Loxhd1 protein_coding protein_coding MGP_BALBcJ_T0050081.1 MGP_BALBcJ_G0024541.1 mouse_genomes_project 18 74968872 75002677 + MGP_BALBcJ_P0050081 Loxhd1 protein_coding protein_coding MGP_BALBcJ_T0100861.1 MGP_BALBcJ_G0038897.1 mouse_genomes_project 18 23709036 23709167 + Gm23674 snoRNA snoRNA MGP_BALBcJ_T0102366.1 MGP_BALBcJ_G0040182.1 mouse_genomes_project 18 40065 41811 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013302.1 MGP_BALBcJ_G0011399.1 mouse_genomes_project 18 22605299 22605831 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049076.1 MGP_BALBcJ_G0024167.1 mouse_genomes_project 18 21775521 21808240 - MGP_BALBcJ_P0049076 Slc39a6 protein_coding protein_coding MGP_BALBcJ_T0049077.1 MGP_BALBcJ_G0024167.1 mouse_genomes_project 18 21778655 21807938 - MGP_BALBcJ_P0049077 Slc39a6 protein_coding protein_coding MGP_BALBcJ_T0049078.1 MGP_BALBcJ_G0024167.1 mouse_genomes_project 18 21800739 21803843 - Slc39a6 protein_coding retained_intron MGP_BALBcJ_T0049079.1 MGP_BALBcJ_G0024167.1 mouse_genomes_project 18 21805907 21807716 - MGP_BALBcJ_P0049079 Slc39a6 protein_coding protein_coding MGP_BALBcJ_T0049643.1 MGP_BALBcJ_G0024400.1 mouse_genomes_project 18 50575367 50716627 + MGP_BALBcJ_P0049643 Snx24 protein_coding protein_coding MGP_BALBcJ_T0049644.1 MGP_BALBcJ_G0024400.1 mouse_genomes_project 18 50575474 50716627 + MGP_BALBcJ_P0049644 Snx24 protein_coding protein_coding MGP_BALBcJ_T0102368.1 MGP_BALBcJ_G0040184.1 mouse_genomes_project 18 40065 41811 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0048856.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2888026 2977115 - MGP_BALBcJ_P0048856 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048857.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2888384 3001106 - MGP_BALBcJ_P0048857 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048858.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2888794 3001159 - MGP_BALBcJ_P0048858 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048859.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2888814 3001297 - MGP_BALBcJ_P0048859 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048860.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2890029 3001091 - MGP_BALBcJ_P0048860 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048861.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2890153 3001087 - MGP_BALBcJ_P0048861 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048862.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2896441 2898252 - Arhgap12 protein_coding retained_intron MGP_BALBcJ_T0048863.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2902965 2957022 - Arhgap12 protein_coding processed_transcript MGP_BALBcJ_T0048864.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2909974 2976732 - MGP_BALBcJ_P0048864 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048865.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2918226 3001169 - Arhgap12 protein_coding processed_transcript MGP_BALBcJ_T0048866.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2922528 2931152 - Arhgap12 protein_coding processed_transcript MGP_BALBcJ_T0048867.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2922632 3001154 - MGP_BALBcJ_P0048867 Arhgap12 protein_coding protein_coding MGP_BALBcJ_T0048868.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2925026 3001140 - Arhgap12 protein_coding processed_transcript MGP_BALBcJ_T0048869.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2926396 3001134 - Arhgap12 protein_coding processed_transcript MGP_BALBcJ_T0048870.1 MGP_BALBcJ_G0024090.1 mouse_genomes_project 18 2929857 2932305 - Arhgap12 protein_coding retained_intron MGP_BALBcJ_T0049136.1 MGP_BALBcJ_G0024197.1 mouse_genomes_project 18 30148437 30379260 + MGP_BALBcJ_P0049136 Camk4 protein_coding protein_coding MGP_BALBcJ_T0049198.1 MGP_BALBcJ_G0024219.1 mouse_genomes_project 18 32035326 32040658 + MGP_BALBcJ_P0049198 Egr1 protein_coding protein_coding MGP_BALBcJ_T0049199.1 MGP_BALBcJ_G0024219.1 mouse_genomes_project 18 32036709 32040630 + MGP_BALBcJ_P0049199 Egr1 protein_coding protein_coding MGP_BALBcJ_T0050123.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77793673 77834507 + MGP_BALBcJ_P0050123 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050124.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77793723 77825254 + MGP_BALBcJ_P0050124 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050125.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77795627 77834595 + MGP_BALBcJ_P0050125 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050126.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796218 77825940 + MGP_BALBcJ_P0050126 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050127.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796666 77834586 + MGP_BALBcJ_P0050127 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050128.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796670 77817015 + Pqlc1 protein_coding retained_intron MGP_BALBcJ_T0050129.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796688 77834594 + MGP_BALBcJ_P0050129 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050130.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796689 77815195 + Pqlc1 protein_coding retained_intron MGP_BALBcJ_T0050131.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796689 77834584 + MGP_BALBcJ_P0050131 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050132.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77796700 77834582 + MGP_BALBcJ_P0050132 Pqlc1 protein_coding protein_coding MGP_BALBcJ_T0050133.1 MGP_BALBcJ_G0024559.1 mouse_genomes_project 18 77803611 77804257 + Pqlc1 protein_coding processed_transcript MGP_BALBcJ_T0049405.1 MGP_BALBcJ_G0024315.1 mouse_genomes_project 18 34985643 35077409 + MGP_BALBcJ_P0049405 protein_coding protein_coding MGP_BALBcJ_T0013337.1 MGP_BALBcJ_G0011434.1 mouse_genomes_project 18 66783031 66783866 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049699.1 MGP_BALBcJ_G0024425.1 mouse_genomes_project 18 57645746 57654857 + MGP_BALBcJ_P0049699 F830016B08Rik protein_coding protein_coding MGP_BALBcJ_T0049532.1 MGP_BALBcJ_G0024353.1 mouse_genomes_project 18 40841687 40999094 - MGP_BALBcJ_P0049532 Jakmip2 protein_coding protein_coding MGP_BALBcJ_T0049894.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65830130 65854895 + MGP_BALBcJ_P0049894 Rnmt protein_coding protein_coding MGP_BALBcJ_T0049895.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65830167 65839193 + MGP_BALBcJ_P0049895 Rnmt protein_coding protein_coding MGP_BALBcJ_T0049896.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65830173 65845236 + Rnmt protein_coding retained_intron MGP_BALBcJ_T0049897.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65830175 65851949 + MGP_BALBcJ_P0049897 Rnmt protein_coding protein_coding MGP_BALBcJ_T0049898.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65830197 65841458 + MGP_BALBcJ_P0049898 Rnmt protein_coding protein_coding MGP_BALBcJ_T0049899.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65834772 65835970 + MGP_BALBcJ_P0049899 Rnmt protein_coding protein_coding MGP_BALBcJ_T0049900.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65847533 65849287 + Rnmt protein_coding retained_intron MGP_BALBcJ_T0049901.1 MGP_BALBcJ_G0024501.1 mouse_genomes_project 18 65849039 65854894 + Rnmt protein_coding processed_transcript MGP_BALBcJ_T0049004.1 MGP_BALBcJ_G0024136.1 mouse_genomes_project 18 13583384 13802784 - MGP_BALBcJ_P0049004 Cdh2 protein_coding protein_coding MGP_BALBcJ_T0049005.1 MGP_BALBcJ_G0024136.1 mouse_genomes_project 18 13765328 13802852 - Cdh2 protein_coding retained_intron MGP_BALBcJ_T0049626.1 MGP_BALBcJ_G0024391.1 mouse_genomes_project 18 49183613 49184231 - MGP_BALBcJ_P0049626 Gm4950 protein_coding protein_coding MGP_BALBcJ_T0049013.1 MGP_BALBcJ_G0024140.1 mouse_genomes_project 18 17309380 17353687 + MGP_BALBcJ_P0049013 Dsg1c protein_coding protein_coding MGP_BALBcJ_T0007008.1 MGP_BALBcJ_G0005758.1 mouse_genomes_project 18 52300300 52306546 + Gm26742 lincRNA lincRNA MGP_BALBcJ_T0099049.1 MGP_BALBcJ_G0037087.1 mouse_genomes_project 18 78517732 78526711 - Gm27238 sense_overlapping sense_overlapping MGP_BALBcJ_T0098549.1 MGP_BALBcJ_G0036603.1 mouse_genomes_project 18 21891156 21891271 - n-R5s23 rRNA rRNA MGP_BALBcJ_T0010237.1 MGP_BALBcJ_G0008362.1 mouse_genomes_project 18 57514490 57514600 + Gm23576 miRNA miRNA MGP_BALBcJ_T0049206.1 MGP_BALBcJ_G0024222.1 mouse_genomes_project 18 32300001 32439981 + MGP_BALBcJ_P0049206 Ctnna1 protein_coding protein_coding MGP_BALBcJ_T0049367.1 MGP_BALBcJ_G0024285.1 mouse_genomes_project 18 34628606 34631457 + MGP_BALBcJ_P0049367 Pcdhb10 protein_coding protein_coding MGP_BALBcJ_T0049546.1 MGP_BALBcJ_G0024363.1 mouse_genomes_project 18 41498458 41504343 - MGP_BALBcJ_P0049546 Spink11 protein_coding protein_coding MGP_BALBcJ_T0049547.1 MGP_BALBcJ_G0024363.1 mouse_genomes_project 18 41498868 41500759 - Spink11 protein_coding retained_intron MGP_BALBcJ_T0050010.1 MGP_BALBcJ_G0024520.1 mouse_genomes_project 18 71591527 71592010 + MGP_BALBcJ_P0050010 Gm9925 protein_coding protein_coding MGP_BALBcJ_T0049376.1 MGP_BALBcJ_G0024294.1 mouse_genomes_project 18 34717708 34724852 + MGP_BALBcJ_P0049376 Pcdhb19 protein_coding protein_coding MGP_BALBcJ_T0049645.1 MGP_BALBcJ_G0024401.1 mouse_genomes_project 18 50732512 50745630 - MGP_BALBcJ_P0049645 Ppic protein_coding protein_coding MGP_BALBcJ_T0010244.1 MGP_BALBcJ_G0008369.1 mouse_genomes_project 18 59028927 59028997 - Mir145a miRNA miRNA MGP_BALBcJ_T0048919.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7196300 7375973 + Greb1l protein_coding retained_intron MGP_BALBcJ_T0048920.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7196302 7437295 + MGP_BALBcJ_P0048920 Greb1l protein_coding protein_coding MGP_BALBcJ_T0048921.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7323484 7434838 + MGP_BALBcJ_P0048921 Greb1l protein_coding unknown_likely_coding MGP_BALBcJ_T0048922.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7331726 7413112 + MGP_BALBcJ_P0048922 Greb1l protein_coding protein_coding MGP_BALBcJ_T0048923.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7383059 7390298 + Greb1l protein_coding retained_intron MGP_BALBcJ_T0048924.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7384367 7428099 + MGP_BALBcJ_P0048924 Greb1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048925.1 MGP_BALBcJ_G0024108.1 mouse_genomes_project 18 7428180 7433216 + Greb1l protein_coding processed_transcript MGP_BALBcJ_T0013295.1 MGP_BALBcJ_G0011392.1 mouse_genomes_project 18 9864397 9865037 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049381.1 MGP_BALBcJ_G0024299.1 mouse_genomes_project 18 34873582 34877297 - MGP_BALBcJ_P0049381 Taf7 protein_coding protein_coding MGP_BALBcJ_T0013283.1 MGP_BALBcJ_G0011380.1 mouse_genomes_project 18 3227863 3228172 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003820.1 MGP_BALBcJ_G0003427.1 mouse_genomes_project 18 72086301 72087038 - antisense antisense MGP_BALBcJ_T0049116.1 MGP_BALBcJ_G0024184.1 mouse_genomes_project 18 29038801 29039353 - MGP_BALBcJ_P0049116 Gm6665 protein_coding protein_coding MGP_BALBcJ_T0013284.1 MGP_BALBcJ_G0011381.1 mouse_genomes_project 18 4430897 4431305 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013309.1 MGP_BALBcJ_G0011406.1 mouse_genomes_project 18 33905233 33906204 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049552.1 MGP_BALBcJ_G0024367.1 mouse_genomes_project 18 41671059 41686584 + MGP_BALBcJ_P0049552 Dcp2 protein_coding protein_coding MGP_BALBcJ_T0049553.1 MGP_BALBcJ_G0024367.1 mouse_genomes_project 18 41671084 41715056 + MGP_BALBcJ_P0049553 Dcp2 protein_coding protein_coding MGP_BALBcJ_T0049823.1 MGP_BALBcJ_G0024469.1 mouse_genomes_project 18 61875778 61908876 - MGP_BALBcJ_P0049823 Fech protein_coding protein_coding MGP_BALBcJ_T0049876.1 MGP_BALBcJ_G0024489.1 mouse_genomes_project 18 64889067 64901299 + MGP_BALBcJ_P0049876 Tubb6 protein_coding protein_coding MGP_BALBcJ_T0049773.1 MGP_BALBcJ_G0024449.1 mouse_genomes_project 18 59080061 59091117 - MGP_BALBcJ_P0049773 Pcyox1l protein_coding protein_coding MGP_BALBcJ_T0049774.1 MGP_BALBcJ_G0024449.1 mouse_genomes_project 18 59082710 59091095 - MGP_BALBcJ_P0049774 Pcyox1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049775.1 MGP_BALBcJ_G0024449.1 mouse_genomes_project 18 59086331 59091117 - Pcyox1l protein_coding retained_intron MGP_BALBcJ_T0048828.1 MGP_BALBcJ_G0024085.1 mouse_genomes_project 18 1244788 1267297 + MGP_BALBcJ_P0048828 Mtpap protein_coding protein_coding MGP_BALBcJ_T0099601.1 MGP_BALBcJ_G0037637.1 mouse_genomes_project 18 30024468 30024575 + Gm26378 snRNA snRNA MGP_BALBcJ_T0050161.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80167805 80266978 - MGP_BALBcJ_P0050161 Zfp236 protein_coding protein_coding MGP_BALBcJ_T0050162.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80167807 80257504 - MGP_BALBcJ_P0050162 Zfp236 protein_coding unknown_likely_coding MGP_BALBcJ_T0050163.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80169688 80192298 - MGP_BALBcJ_P0050163 Zfp236 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050164.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80171367 80266903 - MGP_BALBcJ_P0050164 Zfp236 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050165.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80171367 80266903 - MGP_BALBcJ_P0050165 Zfp236 protein_coding protein_coding MGP_BALBcJ_T0050166.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80212972 80214156 - Zfp236 protein_coding retained_intron MGP_BALBcJ_T0050167.1 MGP_BALBcJ_G0024567.1 mouse_genomes_project 18 80254591 80265706 - MGP_BALBcJ_P0050167 Zfp236 protein_coding protein_coding MGP_BALBcJ_T0099602.1 MGP_BALBcJ_G0037638.1 mouse_genomes_project 18 30212536 30212640 - Gm22814 snRNA snRNA MGP_BALBcJ_T0013297.1 MGP_BALBcJ_G0011394.1 mouse_genomes_project 18 13265400 13265697 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006996.1 MGP_BALBcJ_G0005749.1 mouse_genomes_project 18 31926369 31931217 + 2010110K18Rik lincRNA lincRNA MGP_BALBcJ_T0006997.1 MGP_BALBcJ_G0005749.1 mouse_genomes_project 18 31926472 31933200 + 2010110K18Rik lincRNA lincRNA MGP_BALBcJ_T0049375.1 MGP_BALBcJ_G0024293.1 mouse_genomes_project 18 34710182 34715223 + MGP_BALBcJ_P0049375 Pcdhb18 protein_coding protein_coding MGP_BALBcJ_T0017590.1 MGP_BALBcJ_G0015301.1 mouse_genomes_project 18 35446166 35465983 + 2010320O07Rik processed_transcript processed_transcript MGP_BALBcJ_T0049883.1 MGP_BALBcJ_G0024495.1 mouse_genomes_project 18 65146666 65159205 + MGP_BALBcJ_P0049883 Psmg2 protein_coding protein_coding MGP_BALBcJ_T0101656.1 MGP_BALBcJ_G0039654.1 mouse_genomes_project 18 34293731 34295473 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101657.1 MGP_BALBcJ_G0039654.1 mouse_genomes_project 18 34295236 34296181 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0013308.1 MGP_BALBcJ_G0011405.1 mouse_genomes_project 18 33831468 33832240 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099600.1 MGP_BALBcJ_G0037636.1 mouse_genomes_project 18 20995363 20995465 - Gm23207 snRNA snRNA MGP_BALBcJ_T0013334.1 MGP_BALBcJ_G0011431.1 mouse_genomes_project 18 58142201 58142613 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010214.1 MGP_BALBcJ_G0008339.1 mouse_genomes_project 18 7236887 7237053 - Gm44409 miRNA miRNA MGP_BALBcJ_T0049598.1 MGP_BALBcJ_G0024384.1 mouse_genomes_project 18 46973080 47038553 - MGP_BALBcJ_P0049598 Dtwd2 protein_coding protein_coding MGP_BALBcJ_T0049599.1 MGP_BALBcJ_G0024384.1 mouse_genomes_project 18 46973563 47038553 - MGP_BALBcJ_P0049599 Dtwd2 protein_coding protein_coding MGP_BALBcJ_T0049600.1 MGP_BALBcJ_G0024384.1 mouse_genomes_project 18 46974242 47010825 - Dtwd2 protein_coding processed_transcript MGP_BALBcJ_T0003796.1 MGP_BALBcJ_G0003411.1 mouse_genomes_project 18 34895061 34895742 - Gm37118 antisense antisense MGP_BALBcJ_T0099596.1 MGP_BALBcJ_G0037632.1 mouse_genomes_project 18 9114613 9114732 + Gm25289 snRNA snRNA MGP_BALBcJ_T0049619.1 MGP_BALBcJ_G0024387.1 mouse_genomes_project 18 47421454 47491126 + MGP_BALBcJ_P0049619 Hsd17b4 protein_coding protein_coding MGP_BALBcJ_T0049620.1 MGP_BALBcJ_G0024387.1 mouse_genomes_project 18 47421747 47436195 + Hsd17b4 protein_coding processed_transcript MGP_BALBcJ_T0049621.1 MGP_BALBcJ_G0024387.1 mouse_genomes_project 18 47435951 47440129 + Hsd17b4 protein_coding retained_intron MGP_BALBcJ_T0049622.1 MGP_BALBcJ_G0024387.1 mouse_genomes_project 18 47486180 47490829 + Hsd17b4 protein_coding retained_intron MGP_BALBcJ_T0049585.1 MGP_BALBcJ_G0024381.1 mouse_genomes_project 18 44131879 44188803 + MGP_BALBcJ_P0049585 Lvrn protein_coding protein_coding MGP_BALBcJ_T0049586.1 MGP_BALBcJ_G0024381.1 mouse_genomes_project 18 44132032 44187322 + MGP_BALBcJ_P0049586 Lvrn protein_coding unknown_likely_coding MGP_BALBcJ_T0050041.1 MGP_BALBcJ_G0024533.1 mouse_genomes_project 18 73402330 73734210 + MGP_BALBcJ_P0050041 Zbtb7c protein_coding protein_coding MGP_BALBcJ_T0050042.1 MGP_BALBcJ_G0024533.1 mouse_genomes_project 18 73644210 73732089 + MGP_BALBcJ_P0050042 Zbtb7c protein_coding protein_coding MGP_BALBcJ_T0049537.1 MGP_BALBcJ_G0024356.1 mouse_genomes_project 18 41088654 41104839 - MGP_BALBcJ_P0049537 Gm94 protein_coding protein_coding MGP_BALBcJ_T0049305.1 MGP_BALBcJ_G0024249.1 mouse_genomes_project 18 33902318 33907982 + MGP_BALBcJ_P0049305 Slc35a4 protein_coding protein_coding MGP_BALBcJ_T0049306.1 MGP_BALBcJ_G0024249.1 mouse_genomes_project 18 33902682 33907974 + MGP_BALBcJ_P0049306 Slc35a4 protein_coding protein_coding MGP_BALBcJ_T0049307.1 MGP_BALBcJ_G0024249.1 mouse_genomes_project 18 33902686 33904815 + Slc35a4 protein_coding processed_transcript MGP_BALBcJ_T0049308.1 MGP_BALBcJ_G0024249.1 mouse_genomes_project 18 33902695 33904072 + Slc35a4 protein_coding processed_transcript MGP_BALBcJ_T0049309.1 MGP_BALBcJ_G0024249.1 mouse_genomes_project 18 33902695 33907979 + MGP_BALBcJ_P0049309 Slc35a4 protein_coding protein_coding MGP_BALBcJ_T0049310.1 MGP_BALBcJ_G0024249.1 mouse_genomes_project 18 33902712 33904838 + MGP_BALBcJ_P0049310 Slc35a4 protein_coding protein_coding MGP_BALBcJ_T0049573.1 MGP_BALBcJ_G0024373.1 mouse_genomes_project 18 43561914 43592711 - MGP_BALBcJ_P0049573 Ccdc112 protein_coding protein_coding MGP_BALBcJ_T0003792.1 MGP_BALBcJ_G0003407.1 mouse_genomes_project 18 34191653 34192211 - Gm37753 antisense antisense MGP_BALBcJ_T0049060.1 MGP_BALBcJ_G0024161.1 mouse_genomes_project 18 21163470 21181922 + MGP_BALBcJ_P0049060 Zfp35 protein_coding protein_coding MGP_BALBcJ_T0006983.1 MGP_BALBcJ_G0005740.1 mouse_genomes_project 18 14005248 14129691 + 1700001G01Rik lincRNA lincRNA MGP_BALBcJ_T0006984.1 MGP_BALBcJ_G0005740.1 mouse_genomes_project 18 14005273 14039569 + 1700001G01Rik lincRNA lincRNA MGP_BALBcJ_T0006985.1 MGP_BALBcJ_G0005740.1 mouse_genomes_project 18 14025558 14129691 + 1700001G01Rik lincRNA lincRNA MGP_BALBcJ_T0006986.1 MGP_BALBcJ_G0005740.1 mouse_genomes_project 18 14117918 14129646 + 1700001G01Rik lincRNA lincRNA MGP_BALBcJ_T0098558.1 MGP_BALBcJ_G0036612.1 mouse_genomes_project 18 72587652 72587744 + Gm27781 rRNA rRNA MGP_BALBcJ_T0013340.1 MGP_BALBcJ_G0011437.1 mouse_genomes_project 18 77401767 77402763 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0102371.1 MGP_BALBcJ_G0040187.1 mouse_genomes_project 18 34240852 34241639 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010251.1 MGP_BALBcJ_G0008376.1 mouse_genomes_project 18 68045591 68045695 + Mir6357 miRNA miRNA MGP_BALBcJ_T0098856.1 MGP_BALBcJ_G0036904.1 mouse_genomes_project 18 2436857 2439088 - Gm26575 sense_intronic sense_intronic MGP_BALBcJ_T0100869.1 MGP_BALBcJ_G0038905.1 mouse_genomes_project 18 32118070 32118140 - Gm26109 snoRNA snoRNA MGP_BALBcJ_T0048946.1 MGP_BALBcJ_G0024117.1 mouse_genomes_project 18 9074402 9103003 + MGP_BALBcJ_P0048946 Riok3 protein_coding protein_coding MGP_BALBcJ_T0013327.1 MGP_BALBcJ_G0011424.1 mouse_genomes_project 18 50278877 50279930 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017606.1 MGP_BALBcJ_G0015306.1 mouse_genomes_project 18 63743143 63773162 + Gm15958 processed_transcript processed_transcript MGP_BALBcJ_T0017607.1 MGP_BALBcJ_G0015306.1 mouse_genomes_project 18 63743756 63765640 + Gm15958 processed_transcript processed_transcript MGP_BALBcJ_T0049369.1 MGP_BALBcJ_G0024287.1 mouse_genomes_project 18 34655234 34658268 + MGP_BALBcJ_P0049369 Pcdhb12 protein_coding protein_coding MGP_BALBcJ_T0049280.1 MGP_BALBcJ_G0024244.1 mouse_genomes_project 18 33724751 33735661 - MGP_BALBcJ_P0049280 Hbegf protein_coding protein_coding MGP_BALBcJ_T0006978.1 MGP_BALBcJ_G0005736.1 mouse_genomes_project 18 7580511 7585873 + 4930563E18Rik lincRNA lincRNA MGP_BALBcJ_T0049832.1 MGP_BALBcJ_G0024474.1 mouse_genomes_project 18 62862313 62910618 + MGP_BALBcJ_P0049832 Malt1 protein_coding protein_coding MGP_BALBcJ_T0049833.1 MGP_BALBcJ_G0024474.1 mouse_genomes_project 18 62862463 62908237 + MGP_BALBcJ_P0049833 Malt1 protein_coding unknown_likely_coding MGP_BALBcJ_T0049458.1 MGP_BALBcJ_G0024328.1 mouse_genomes_project 18 35504481 35515027 - Pcdh12 protein_coding retained_intron MGP_BALBcJ_T0049459.1 MGP_BALBcJ_G0024328.1 mouse_genomes_project 18 35506217 35521137 - MGP_BALBcJ_P0049459 Pcdh12 protein_coding protein_coding MGP_BALBcJ_T0049460.1 MGP_BALBcJ_G0024328.1 mouse_genomes_project 18 35517821 35521466 - Pcdh12 protein_coding retained_intron MGP_BALBcJ_T0049844.1 MGP_BALBcJ_G0024476.1 mouse_genomes_project 18 63133271 63183687 + MGP_BALBcJ_P0049844 Oacyl protein_coding protein_coding MGP_BALBcJ_T0049845.1 MGP_BALBcJ_G0024476.1 mouse_genomes_project 18 63133273 63183751 + MGP_BALBcJ_P0049845 Oacyl protein_coding protein_coding MGP_BALBcJ_T0049846.1 MGP_BALBcJ_G0024476.1 mouse_genomes_project 18 63181191 63182539 + Oacyl protein_coding processed_transcript MGP_BALBcJ_T0003801.1 MGP_BALBcJ_G0003416.1 mouse_genomes_project 18 36512042 36568563 - Gm15336 antisense antisense MGP_BALBcJ_T0049963.1 MGP_BALBcJ_G0024506.1 mouse_genomes_project 18 67455109 67473960 + Ccdc68 protein_coding processed_transcript MGP_BALBcJ_T0049964.1 MGP_BALBcJ_G0024506.1 mouse_genomes_project 18 67455148 67499446 + MGP_BALBcJ_P0049964 Ccdc68 protein_coding protein_coding MGP_BALBcJ_T0049965.1 MGP_BALBcJ_G0024506.1 mouse_genomes_project 18 67455252 67468866 + Ccdc68 protein_coding processed_transcript MGP_BALBcJ_T0049966.1 MGP_BALBcJ_G0024506.1 mouse_genomes_project 18 67455258 67499446 + MGP_BALBcJ_P0049966 Ccdc68 protein_coding protein_coding MGP_BALBcJ_T0048947.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9118590 9130710 + 3110002H16Rik protein_coding retained_intron MGP_BALBcJ_T0048948.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9118590 9139564 + MGP_BALBcJ_P0048948 3110002H16Rik protein_coding protein_coding MGP_BALBcJ_T0048949.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9118612 9130165 + 3110002H16Rik protein_coding retained_intron MGP_BALBcJ_T0048950.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9118625 9139541 + 3110002H16Rik protein_coding retained_intron MGP_BALBcJ_T0048951.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9129163 9134510 + MGP_BALBcJ_P0048951 3110002H16Rik protein_coding protein_coding MGP_BALBcJ_T0048952.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9130118 9137788 + MGP_BALBcJ_P0048952 3110002H16Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048953.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9135009 9139541 + 3110002H16Rik protein_coding retained_intron MGP_BALBcJ_T0048954.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9135233 9139498 + 3110002H16Rik protein_coding retained_intron MGP_BALBcJ_T0048955.1 MGP_BALBcJ_G0024118.1 mouse_genomes_project 18 9138560 9139541 + 3110002H16Rik protein_coding retained_intron MGP_BALBcJ_T0049500.1 MGP_BALBcJ_G0024336.1 mouse_genomes_project 18 37037300 37039886 + MGP_BALBcJ_P0049500 Pabpc2 protein_coding protein_coding MGP_BALBcJ_T0049665.1 MGP_BALBcJ_G0024409.1 mouse_genomes_project 18 53931294 53938243 + MGP_BALBcJ_P0049665 Tex43 protein_coding protein_coding MGP_BALBcJ_T0049666.1 MGP_BALBcJ_G0024409.1 mouse_genomes_project 18 53931323 53936198 + MGP_BALBcJ_P0049666 Tex43 protein_coding protein_coding MGP_BALBcJ_T0049667.1 MGP_BALBcJ_G0024409.1 mouse_genomes_project 18 53931333 53938173 + MGP_BALBcJ_P0049667 Tex43 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049668.1 MGP_BALBcJ_G0024409.1 mouse_genomes_project 18 53931370 53938243 + MGP_BALBcJ_P0049668 Tex43 protein_coding protein_coding MGP_BALBcJ_T0049023.1 MGP_BALBcJ_G0024148.1 mouse_genomes_project 18 17960720 18041293 - MGP_BALBcJ_P0049023 Trappc8 protein_coding protein_coding MGP_BALBcJ_T0049024.1 MGP_BALBcJ_G0024148.1 mouse_genomes_project 18 17961987 18041282 - MGP_BALBcJ_P0049024 Trappc8 protein_coding unknown_likely_coding MGP_BALBcJ_T0049025.1 MGP_BALBcJ_G0024148.1 mouse_genomes_project 18 17990900 18041293 - MGP_BALBcJ_P0049025 Trappc8 protein_coding protein_coding MGP_BALBcJ_T0049386.1 MGP_BALBcJ_G0024303.1 mouse_genomes_project 18 34913160 35077406 + MGP_BALBcJ_P0049386 Pcdhgb1 protein_coding protein_coding MGP_BALBcJ_T0049387.1 MGP_BALBcJ_G0024303.1 mouse_genomes_project 18 34913184 34919782 + Pcdhgb1 protein_coding processed_transcript MGP_BALBcJ_T0011448.1 MGP_BALBcJ_G0009573.1 mouse_genomes_project 18 82409069 82409372 + Gm22819 misc_RNA misc_RNA MGP_BALBcJ_T0049338.1 MGP_BALBcJ_G0024264.1 mouse_genomes_project 18 34176833 35075736 + MGP_BALBcJ_P0049338 Gm42416 protein_coding protein_coding MGP_BALBcJ_T0011435.1 MGP_BALBcJ_G0009560.1 mouse_genomes_project 18 38076675 38076980 - Gm22515 misc_RNA misc_RNA MGP_BALBcJ_T0049143.1 MGP_BALBcJ_G0024200.1 mouse_genomes_project 18 30631102 30638753 + MGP_BALBcJ_P0049143 Gm10549 protein_coding protein_coding MGP_BALBcJ_T0049688.1 MGP_BALBcJ_G0024420.1 mouse_genomes_project 18 56007689 56027968 + MGP_BALBcJ_P0049688 Isoc1 protein_coding protein_coding MGP_BALBcJ_T0049061.1 MGP_BALBcJ_G0024162.1 mouse_genomes_project 18 21186247 21197356 - MGP_BALBcJ_P0049061 Zfp24 protein_coding protein_coding MGP_BALBcJ_T0049062.1 MGP_BALBcJ_G0024162.1 mouse_genomes_project 18 21190470 21196866 - MGP_BALBcJ_P0049062 Zfp24 protein_coding protein_coding MGP_BALBcJ_T0049063.1 MGP_BALBcJ_G0024162.1 mouse_genomes_project 18 21194516 21196916 - MGP_BALBcJ_P0049063 Zfp24 protein_coding protein_coding MGP_BALBcJ_T0049283.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33780935 33805058 + MGP_BALBcJ_P0049283 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0049284.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33781559 33881917 + MGP_BALBcJ_P0049284 Ankhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049285.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33781559 33881917 + MGP_BALBcJ_P0049285 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0049286.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33781627 33888924 + MGP_BALBcJ_P0049286 Ankhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049287.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33802472 33805312 + Ankhd1 protein_coding retained_intron MGP_BALBcJ_T0049288.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33822301 33847485 + MGP_BALBcJ_P0049288 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0049289.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33827702 33857265 + Ankhd1 protein_coding processed_transcript MGP_BALBcJ_T0049290.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33836209 33857253 + MGP_BALBcJ_P0049290 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0049291.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33836612 33847075 + Ankhd1 protein_coding retained_intron MGP_BALBcJ_T0049292.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33861184 33865822 + MGP_BALBcJ_P0049292 Ankhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049293.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33861411 33865828 + MGP_BALBcJ_P0049293 Ankhd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049294.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33864207 33867103 + Ankhd1 protein_coding retained_intron MGP_BALBcJ_T0049295.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33867130 33881922 + MGP_BALBcJ_P0049295 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0049296.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33870861 33888924 + MGP_BALBcJ_P0049296 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0049297.1 MGP_BALBcJ_G0024246.1 mouse_genomes_project 18 33878516 33881818 + MGP_BALBcJ_P0049297 Ankhd1 protein_coding protein_coding MGP_BALBcJ_T0100885.1 MGP_BALBcJ_G0038921.1 mouse_genomes_project 18 75250227 75250359 + Gm26014 snoRNA snoRNA MGP_BALBcJ_T0049783.1 MGP_BALBcJ_G0024454.1 mouse_genomes_project 18 59578212 59580357 - MGP_BALBcJ_P0049783 Adrb2 protein_coding protein_coding MGP_BALBcJ_T0007029.1 MGP_BALBcJ_G0005774.1 mouse_genomes_project 18 80692990 80694323 - 1700095A13Rik lincRNA lincRNA MGP_BALBcJ_T0011425.1 MGP_BALBcJ_G0009550.1 mouse_genomes_project 18 13211520 13211870 - Gm24385 misc_RNA misc_RNA MGP_BALBcJ_T0013292.1 MGP_BALBcJ_G0011389.1 mouse_genomes_project 18 9316112 9316543 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0003779.1 MGP_BALBcJ_G0003397.1 mouse_genomes_project 18 7656615 7660776 - Mir133a-1hg antisense antisense MGP_BALBcJ_T0101654.1 MGP_BALBcJ_G0039653.1 mouse_genomes_project 18 31370017 31383597 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0101655.1 MGP_BALBcJ_G0039653.1 mouse_genomes_project 18 31372029 31372301 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0049403.1 MGP_BALBcJ_G0024313.1 mouse_genomes_project 18 34976403 35077409 + MGP_BALBcJ_P0049403 Pcdhgb6 protein_coding protein_coding MGP_BALBcJ_T0011436.1 MGP_BALBcJ_G0009561.1 mouse_genomes_project 18 38237351 38237625 + Gm22483 misc_RNA misc_RNA MGP_BALBcJ_T0049971.1 MGP_BALBcJ_G0024508.1 mouse_genomes_project 18 67758433 67762598 - MGP_BALBcJ_P0049971 Dynap protein_coding protein_coding MGP_BALBcJ_T0011423.1 MGP_BALBcJ_G0009548.1 mouse_genomes_project 18 9929507 9929814 + Gm26407 misc_RNA misc_RNA MGP_BALBcJ_T0049729.1 MGP_BALBcJ_G0024434.1 mouse_genomes_project 18 58165030 58173759 - MGP_BALBcJ_P0049729 protein_coding unknown_likely_coding MGP_BALBcJ_T0049730.1 MGP_BALBcJ_G0024434.1 mouse_genomes_project 18 58172530 58213203 - MGP_BALBcJ_P0049730 protein_coding protein_coding MGP_BALBcJ_T0049734.1 MGP_BALBcJ_G0024434.1 mouse_genomes_project 18 58189079 58213615 - MGP_BALBcJ_P0049734 protein_coding unknown_likely_coding MGP_BALBcJ_T0049735.1 MGP_BALBcJ_G0024434.1 mouse_genomes_project 18 58203334 58204295 - protein_coding retained_intron MGP_BALBcJ_T0048830.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1780924 1986357 + MGP_BALBcJ_P0048830 Svil protein_coding protein_coding MGP_BALBcJ_T0048831.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1780951 1921970 + Svil protein_coding retained_intron MGP_BALBcJ_T0048832.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1781089 1921886 + Svil protein_coding retained_intron MGP_BALBcJ_T0048833.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1854804 1910449 + MGP_BALBcJ_P0048833 Svil protein_coding protein_coding MGP_BALBcJ_T0048834.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1855609 1985678 + MGP_BALBcJ_P0048834 Svil protein_coding protein_coding MGP_BALBcJ_T0048835.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1855927 1864026 + Svil protein_coding processed_transcript MGP_BALBcJ_T0048836.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1895959 1986360 + MGP_BALBcJ_P0048836 Svil protein_coding protein_coding MGP_BALBcJ_T0048837.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1903562 1985508 + MGP_BALBcJ_P0048837 Svil protein_coding protein_coding MGP_BALBcJ_T0048838.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1903564 1985232 + MGP_BALBcJ_P0048838 Svil protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048839.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1910146 1986354 + MGP_BALBcJ_P0048839 Svil protein_coding protein_coding MGP_BALBcJ_T0048840.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1928128 1986357 + MGP_BALBcJ_P0048840 Svil protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048841.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1959149 1960285 + Svil protein_coding retained_intron MGP_BALBcJ_T0048842.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1970017 1984089 + MGP_BALBcJ_P0048842 Svil protein_coding protein_coding MGP_BALBcJ_T0048843.1 MGP_BALBcJ_G0024087.1 mouse_genomes_project 18 1981325 1986284 + Svil protein_coding retained_intron MGP_BALBcJ_T0099604.1 MGP_BALBcJ_G0037640.1 mouse_genomes_project 18 31351449 31351511 - Gm23411 snRNA snRNA MGP_BALBcJ_T0049576.1 MGP_BALBcJ_G0024376.1 mouse_genomes_project 18 43838472 43876927 - MGP_BALBcJ_P0049576 Tmed7 protein_coding protein_coding MGP_BALBcJ_T0049578.1 MGP_BALBcJ_G0024376.1 mouse_genomes_project 18 43865634 43877129 - Tmed7 protein_coding retained_intron MGP_BALBcJ_T0049579.1 MGP_BALBcJ_G0024376.1 mouse_genomes_project 18 43867727 43877148 - MGP_BALBcJ_P0049579 Tmed7 protein_coding protein_coding MGP_BALBcJ_T0013282.1 MGP_BALBcJ_G0011379.1 mouse_genomes_project 18 2474617 2474990 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049758.1 MGP_BALBcJ_G0024445.1 mouse_genomes_project 18 58676708 58779260 - MGP_BALBcJ_P0049758 Ppargc1b protein_coding protein_coding MGP_BALBcJ_T0049759.1 MGP_BALBcJ_G0024445.1 mouse_genomes_project 18 58677081 58779229 - MGP_BALBcJ_P0049759 Ppargc1b protein_coding protein_coding MGP_BALBcJ_T0049760.1 MGP_BALBcJ_G0024445.1 mouse_genomes_project 18 58768331 58779229 - Ppargc1b protein_coding processed_transcript MGP_BALBcJ_T0049736.1 MGP_BALBcJ_G0024436.1 mouse_genomes_project 18 58277105 58284535 + MGP_BALBcJ_P0049736 Arsi protein_coding protein_coding MGP_BALBcJ_T0049501.1 MGP_BALBcJ_G0024337.1 mouse_genomes_project 18 37472364 37487078 - MGP_BALBcJ_P0049501 Yipf5 protein_coding protein_coding MGP_BALBcJ_T0013318.1 MGP_BALBcJ_G0011415.1 mouse_genomes_project 18 42383671 42384661 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049340.1 MGP_BALBcJ_G0024266.1 mouse_genomes_project 18 34191693 34406362 + MGP_BALBcJ_P0049340 Pcdha6 protein_coding protein_coding MGP_BALBcJ_T0049341.1 MGP_BALBcJ_G0024266.1 mouse_genomes_project 18 34191710 34406093 + MGP_BALBcJ_P0049341 Pcdha6 protein_coding protein_coding MGP_BALBcJ_T0049210.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740820 32760459 + MGP_BALBcJ_P0049210 Gm28285 protein_coding protein_coding MGP_BALBcJ_T0049211.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740824 32768548 + MGP_BALBcJ_P0049211 Gm28285 protein_coding protein_coding MGP_BALBcJ_T0049212.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740828 32747130 + Gm28285 protein_coding processed_transcript MGP_BALBcJ_T0049213.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740828 32760154 + Gm28285 protein_coding processed_transcript MGP_BALBcJ_T0049214.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740829 32760382 + MGP_BALBcJ_P0049214 Gm28285 protein_coding protein_coding MGP_BALBcJ_T0049215.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740838 32771218 + MGP_BALBcJ_P0049215 Gm28285 protein_coding protein_coding MGP_BALBcJ_T0049216.1 MGP_BALBcJ_G0024226.1 mouse_genomes_project 18 32740854 32760124 + Gm28285 protein_coding processed_transcript MGP_BALBcJ_T0100882.1 MGP_BALBcJ_G0038918.1 mouse_genomes_project 18 72562929 72562995 + Snord58b snoRNA snoRNA MGP_BALBcJ_T0049083.1 MGP_BALBcJ_G0024171.1 mouse_genomes_project 18 21915196 22343632 + MGP_BALBcJ_P0049083 Fhod3 protein_coding protein_coding MGP_BALBcJ_T0006975.1 MGP_BALBcJ_G0005733.1 mouse_genomes_project 18 1242865 1249947 - Gm26865 lincRNA lincRNA MGP_BALBcJ_T0000998.1 MGP_BALBcJ_G0000926.1 mouse_genomes_project 18 41424775 41424948 + TEC TEC MGP_BALBcJ_T0003800.1 MGP_BALBcJ_G0003415.1 mouse_genomes_project 18 36257559 36258117 - Gm15334 antisense antisense MGP_BALBcJ_T0049000.1 MGP_BALBcJ_G0024133.1 mouse_genomes_project 18 12386685 12401317 - MGP_BALBcJ_P0049000 Aqp4 protein_coding protein_coding MGP_BALBcJ_T0049047.1 MGP_BALBcJ_G0024157.1 mouse_genomes_project 18 20600305 20846905 + MGP_BALBcJ_P0049047 protein_coding protein_coding MGP_BALBcJ_T0049048.1 MGP_BALBcJ_G0024157.1 mouse_genomes_project 18 20600305 20790857 + MGP_BALBcJ_P0049048 protein_coding protein_coding MGP_BALBcJ_T0049049.1 MGP_BALBcJ_G0024157.1 mouse_genomes_project 18 20808560 20822981 + MGP_BALBcJ_P0049049 protein_coding unknown_likely_coding MGP_BALBcJ_T0049701.1 MGP_BALBcJ_G0024427.1 mouse_genomes_project 18 57841356 57869394 - MGP_BALBcJ_P0049701 Smim3 protein_coding protein_coding MGP_BALBcJ_T0049784.1 MGP_BALBcJ_G0024455.1 mouse_genomes_project 18 59580523 59584808 + MGP_BALBcJ_P0049784 Gm9949 protein_coding protein_coding MGP_BALBcJ_T0049549.1 MGP_BALBcJ_G0024365.1 mouse_genomes_project 18 41568379 41575981 + MGP_BALBcJ_P0049549 Npy6r protein_coding protein_coding MGP_BALBcJ_T0049698.1 MGP_BALBcJ_G0024424.1 mouse_genomes_project 18 57618818 57623753 - MGP_BALBcJ_P0049698 Gm4841 protein_coding protein_coding MGP_BALBcJ_T0049412.1 MGP_BALBcJ_G0024319.1 mouse_genomes_project 18 35050603 35077409 + MGP_BALBcJ_P0049412 Pcdhga8 protein_coding protein_coding MGP_BALBcJ_T0049413.1 MGP_BALBcJ_G0024319.1 mouse_genomes_project 18 35050925 35077409 + MGP_BALBcJ_P0049413 Pcdhga8 protein_coding protein_coding MGP_BALBcJ_T0049414.1 MGP_BALBcJ_G0024319.1 mouse_genomes_project 18 35050980 35054080 + Pcdhga8 protein_coding retained_intron MGP_BALBcJ_T0049457.1 MGP_BALBcJ_G0024327.1 mouse_genomes_project 18 35487793 35500060 + MGP_BALBcJ_P0049457 0610009O20Rik protein_coding protein_coding MGP_BALBcJ_T0013346.1 MGP_BALBcJ_G0011443.1 mouse_genomes_project 18 87883677 87883896 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0006998.1 MGP_BALBcJ_G0005750.1 mouse_genomes_project 18 31971493 31978079 - Gm26538 lincRNA lincRNA MGP_BALBcJ_T0049865.1 MGP_BALBcJ_G0024482.1 mouse_genomes_project 18 63494228 63743316 - Ccbe1 protein_coding processed_transcript MGP_BALBcJ_T0049866.1 MGP_BALBcJ_G0024482.1 mouse_genomes_project 18 63506394 63743658 - MGP_BALBcJ_P0049866 Ccbe1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049867.1 MGP_BALBcJ_G0024482.1 mouse_genomes_project 18 63510499 63743708 - MGP_BALBcJ_P0049867 Ccbe1 protein_coding protein_coding MGP_BALBcJ_T0049868.1 MGP_BALBcJ_G0024482.1 mouse_genomes_project 18 63721289 63755378 - Ccbe1 protein_coding processed_transcript MGP_BALBcJ_T0049525.1 MGP_BALBcJ_G0024351.1 mouse_genomes_project 18 40515994 40630504 + MGP_BALBcJ_P0049525 Stk32a protein_coding protein_coding MGP_BALBcJ_T0013312.1 MGP_BALBcJ_G0011409.1 mouse_genomes_project 18 35979488 35979602 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0099629.1 MGP_BALBcJ_G0037665.1 mouse_genomes_project 18 83939340 83939447 + Gm25453 snRNA snRNA MGP_BALBcJ_T0007009.1 MGP_BALBcJ_G0005759.1 mouse_genomes_project 18 52309150 52396682 + Gm4221 lincRNA lincRNA MGP_BALBcJ_T0007010.1 MGP_BALBcJ_G0005759.1 mouse_genomes_project 18 52376355 52398759 + Gm4221 lincRNA lincRNA MGP_BALBcJ_T0049902.1 MGP_BALBcJ_G0024502.1 mouse_genomes_project 18 65869101 65871210 + MGP_BALBcJ_P0049902 Mc5r protein_coding protein_coding MGP_BALBcJ_T0049259.1 MGP_BALBcJ_G0024236.1 mouse_genomes_project 18 32932479 32939356 - MGP_BALBcJ_P0049259 Tmem173 protein_coding protein_coding MGP_BALBcJ_T0049321.1 MGP_BALBcJ_G0024257.1 mouse_genomes_project 18 33989712 34006823 - MGP_BALBcJ_P0049321 Hars protein_coding protein_coding MGP_BALBcJ_T0049878.1 MGP_BALBcJ_G0024491.1 mouse_genomes_project 18 64967961 64984021 + MGP_BALBcJ_P0049878 Slmo1 protein_coding protein_coding MGP_BALBcJ_T0049984.1 MGP_BALBcJ_G0024512.1 mouse_genomes_project 18 68101509 68159672 + MGP_BALBcJ_P0049984 Mbd2 protein_coding protein_coding MGP_BALBcJ_T0049985.1 MGP_BALBcJ_G0024512.1 mouse_genomes_project 18 68101654 68116673 + MGP_BALBcJ_P0049985 Mbd2 protein_coding protein_coding MGP_BALBcJ_T0049986.1 MGP_BALBcJ_G0024512.1 mouse_genomes_project 18 68114549 68156334 + MGP_BALBcJ_P0049986 Mbd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049987.1 MGP_BALBcJ_G0024512.1 mouse_genomes_project 18 68126993 68150874 + Mbd2 protein_coding retained_intron MGP_BALBcJ_T0049988.1 MGP_BALBcJ_G0024512.1 mouse_genomes_project 18 68151382 68159318 + Mbd2 protein_coding retained_intron MGP_BALBcJ_T0010215.1 MGP_BALBcJ_G0008340.1 mouse_genomes_project 18 7657801 7657869 - Mir133a-1 miRNA miRNA MGP_BALBcJ_T0017573.1 MGP_BALBcJ_G0015297.1 mouse_genomes_project 18 32740787 32745968 + Snhg4 processed_transcript lincRNA MGP_BALBcJ_T0017574.1 MGP_BALBcJ_G0015297.1 mouse_genomes_project 18 32740826 32742181 + Snhg4 processed_transcript retained_intron MGP_BALBcJ_T0017575.1 MGP_BALBcJ_G0015297.1 mouse_genomes_project 18 32740828 32744647 + Snhg4 processed_transcript retained_intron MGP_BALBcJ_T0017576.1 MGP_BALBcJ_G0015297.1 mouse_genomes_project 18 32740838 32743381 + Snhg4 processed_transcript retained_intron MGP_BALBcJ_T0017577.1 MGP_BALBcJ_G0015297.1 mouse_genomes_project 18 32743555 32744829 + Snhg4 processed_transcript retained_intron MGP_BALBcJ_T0013333.1 MGP_BALBcJ_G0011430.1 mouse_genomes_project 18 57562224 57563440 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049202.1 MGP_BALBcJ_G0024221.1 mouse_genomes_project 18 32112844 32129770 - MGP_BALBcJ_P0049202 Hspa9 protein_coding protein_coding MGP_BALBcJ_T0049203.1 MGP_BALBcJ_G0024221.1 mouse_genomes_project 18 32113697 32114741 - Hspa9 protein_coding retained_intron MGP_BALBcJ_T0049204.1 MGP_BALBcJ_G0024221.1 mouse_genomes_project 18 32114126 32116289 - Hspa9 protein_coding retained_intron MGP_BALBcJ_T0049205.1 MGP_BALBcJ_G0024221.1 mouse_genomes_project 18 32123585 32126988 - Hspa9 protein_coding retained_intron MGP_BALBcJ_T0049160.1 MGP_BALBcJ_G0024204.1 mouse_genomes_project 18 31517024 31545520 - MGP_BALBcJ_P0049160 Reep5 protein_coding protein_coding MGP_BALBcJ_T0048971.1 MGP_BALBcJ_G0024123.1 mouse_genomes_project 18 9700577 9714976 + MGP_BALBcJ_P0048971 Cabyr protein_coding protein_coding MGP_BALBcJ_T0048972.1 MGP_BALBcJ_G0024123.1 mouse_genomes_project 18 9700600 9714970 + MGP_BALBcJ_P0048972 Cabyr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0048973.1 MGP_BALBcJ_G0024123.1 mouse_genomes_project 18 9700602 9714970 + MGP_BALBcJ_P0048973 Cabyr protein_coding protein_coding MGP_BALBcJ_T0048974.1 MGP_BALBcJ_G0024123.1 mouse_genomes_project 18 9700608 9714972 + MGP_BALBcJ_P0048974 Cabyr protein_coding protein_coding MGP_BALBcJ_T0048975.1 MGP_BALBcJ_G0024123.1 mouse_genomes_project 18 9700608 9714972 + MGP_BALBcJ_P0048975 Cabyr protein_coding protein_coding MGP_BALBcJ_T0048976.1 MGP_BALBcJ_G0024123.1 mouse_genomes_project 18 9700608 9714972 + MGP_BALBcJ_P0048976 Cabyr protein_coding protein_coding MGP_BALBcJ_T0049440.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35193487 35196526 - Fchsd1 protein_coding retained_intron MGP_BALBcJ_T0049441.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35193490 35205829 - MGP_BALBcJ_P0049441 Fchsd1 protein_coding protein_coding MGP_BALBcJ_T0049442.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35199018 35200116 - Fchsd1 protein_coding retained_intron MGP_BALBcJ_T0049443.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35201712 35205824 - MGP_BALBcJ_P0049443 Fchsd1 protein_coding protein_coding MGP_BALBcJ_T0049444.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35201750 35203804 - Fchsd1 protein_coding retained_intron MGP_BALBcJ_T0049445.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35203672 35204107 - Fchsd1 protein_coding retained_intron MGP_BALBcJ_T0049446.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35203693 35205824 - MGP_BALBcJ_P0049446 Fchsd1 protein_coding protein_coding MGP_BALBcJ_T0049447.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35203694 35205812 - Fchsd1 protein_coding retained_intron MGP_BALBcJ_T0049448.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35203859 35205824 - MGP_BALBcJ_P0049448 Fchsd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049449.1 MGP_BALBcJ_G0024324.1 mouse_genomes_project 18 35203887 35205583 - Fchsd1 protein_coding retained_intron MGP_BALBcJ_T0049888.1 MGP_BALBcJ_G0024497.1 mouse_genomes_project 18 65280727 65301725 + MGP_BALBcJ_P0049888 Seh1l protein_coding protein_coding MGP_BALBcJ_T0049889.1 MGP_BALBcJ_G0024497.1 mouse_genomes_project 18 65280861 65301753 + MGP_BALBcJ_P0049889 Seh1l protein_coding unknown_likely_coding MGP_BALBcJ_T0049273.1 MGP_BALBcJ_G0024241.1 mouse_genomes_project 18 33501833 33522256 + MGP_BALBcJ_P0049273 Pura protein_coding protein_coding MGP_BALBcJ_T0050030.1 MGP_BALBcJ_G0024526.1 mouse_genomes_project 18 72335511 72362778 + MGP_BALBcJ_P0050030 Acaa2 protein_coding protein_coding MGP_BALBcJ_T0006991.1 MGP_BALBcJ_G0005745.1 mouse_genomes_project 18 29578910 29598097 - A830052D11Rik lincRNA lincRNA MGP_BALBcJ_T0010230.1 MGP_BALBcJ_G0008355.1 mouse_genomes_project 18 39598259 39598322 + Gm22697 miRNA miRNA MGP_BALBcJ_T0049003.1 MGP_BALBcJ_G0024135.1 mouse_genomes_project 18 12814296 12815838 + MGP_BALBcJ_P0049003 Gm10036 protein_coding protein_coding MGP_BALBcJ_T0048844.1 MGP_BALBcJ_G0024088.1 mouse_genomes_project 18 2077417 2198137 - MGP_BALBcJ_P0048844 Zfp438 protein_coding protein_coding MGP_BALBcJ_T0099621.1 MGP_BALBcJ_G0037657.1 mouse_genomes_project 18 62213456 62213556 - Gm24504 snRNA snRNA MGP_BALBcJ_T0003799.1 MGP_BALBcJ_G0003414.1 mouse_genomes_project 18 35064504 35065698 - Gm29994 antisense antisense MGP_BALBcJ_T0049903.1 MGP_BALBcJ_G0024503.1 mouse_genomes_project 18 65931658 65948317 - MGP_BALBcJ_P0049903 Mc2r protein_coding protein_coding MGP_BALBcJ_T0048883.1 MGP_BALBcJ_G0024095.1 mouse_genomes_project 18 3764423 3796392 - Mkx protein_coding processed_transcript MGP_BALBcJ_T0048884.1 MGP_BALBcJ_G0024095.1 mouse_genomes_project 18 3794739 3865017 - MGP_BALBcJ_P0048884 Mkx protein_coding protein_coding MGP_BALBcJ_T0048885.1 MGP_BALBcJ_G0024095.1 mouse_genomes_project 18 3796722 3853000 - Mkx protein_coding retained_intron MGP_BALBcJ_T0048886.1 MGP_BALBcJ_G0024095.1 mouse_genomes_project 18 3860908 3864019 - Mkx protein_coding processed_transcript MGP_BALBcJ_T0048887.1 MGP_BALBcJ_G0024095.1 mouse_genomes_project 18 3862575 3864963 - Mkx protein_coding retained_intron MGP_BALBcJ_T0010240.1 MGP_BALBcJ_G0008365.1 mouse_genomes_project 18 58327021 58327089 + Mir6982 miRNA miRNA MGP_BALBcJ_T0049762.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936691 58971391 + MGP_BALBcJ_P0049762 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049763.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936730 58969635 + MGP_BALBcJ_P0049763 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049764.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936735 58966972 + MGP_BALBcJ_P0049764 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049765.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936735 58963483 + MGP_BALBcJ_P0049765 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049766.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936745 58963629 + MGP_BALBcJ_P0049766 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049767.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936752 58939656 + Csnk1a1 protein_coding retained_intron MGP_BALBcJ_T0049768.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58936756 58969513 + MGP_BALBcJ_P0049768 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049769.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58937105 58968862 + MGP_BALBcJ_P0049769 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049770.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58956889 58963485 + MGP_BALBcJ_P0049770 Csnk1a1 protein_coding protein_coding MGP_BALBcJ_T0049771.1 MGP_BALBcJ_G0024447.1 mouse_genomes_project 18 58964182 58967840 + Csnk1a1 protein_coding processed_transcript MGP_BALBcJ_T0049313.1 MGP_BALBcJ_G0024252.1 mouse_genomes_project 18 33958367 33965585 + MGP_BALBcJ_P0049313 Tmco6 protein_coding protein_coding MGP_BALBcJ_T0048995.1 MGP_BALBcJ_G0024130.1 mouse_genomes_project 18 11692880 11742533 + MGP_BALBcJ_P0048995 Psma8 protein_coding protein_coding MGP_BALBcJ_T0049580.1 MGP_BALBcJ_G0024377.1 mouse_genomes_project 18 43877316 43890897 + MGP_BALBcJ_P0049580 Eif1a protein_coding protein_coding MGP_BALBcJ_T0049581.1 MGP_BALBcJ_G0024377.1 mouse_genomes_project 18 43877320 43889844 + MGP_BALBcJ_P0049581 Eif1a protein_coding protein_coding MGP_BALBcJ_T0098548.1 MGP_BALBcJ_G0036602.1 mouse_genomes_project 18 16909553 16909651 + Gm24238 rRNA rRNA MGP_BALBcJ_T0013321.1 MGP_BALBcJ_G0011418.1 mouse_genomes_project 18 44698458 44699877 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050007.1 MGP_BALBcJ_G0024519.1 mouse_genomes_project 18 71450246 71506012 - MGP_BALBcJ_P0050007 Mapk4 protein_coding protein_coding MGP_BALBcJ_T0050008.1 MGP_BALBcJ_G0024519.1 mouse_genomes_project 18 71450250 71590818 - MGP_BALBcJ_P0050008 Mapk4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050009.1 MGP_BALBcJ_G0024519.1 mouse_genomes_project 18 71496277 71591785 - Mapk4 protein_coding processed_transcript MGP_BALBcJ_T0013335.1 MGP_BALBcJ_G0011432.1 mouse_genomes_project 18 61868023 61870237 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0049786.1 MGP_BALBcJ_G0024457.1 mouse_genomes_project 18 59899545 59944929 - MGP_BALBcJ_P0049786 Fbxo38 protein_coding protein_coding MGP_BALBcJ_T0049398.1 MGP_BALBcJ_G0024310.1 mouse_genomes_project 18 34960022 35077409 + MGP_BALBcJ_P0049398 Pcdhga8 protein_coding protein_coding MGP_BALBcJ_T0049700.1 MGP_BALBcJ_G0024426.1 mouse_genomes_project 18 57729476 57732313 + MGP_BALBcJ_P0049700 Iigp1 protein_coding protein_coding MGP_BALBcJ_T0003819.1 MGP_BALBcJ_G0003426.1 mouse_genomes_project 18 67499638 67502324 + 4930448D08Rik antisense antisense MGP_BALBcJ_T0049433.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35191135 35194602 + MGP_BALBcJ_P0049433 Rell2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049434.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35191195 35194602 + MGP_BALBcJ_P0049434 Rell2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0049435.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35191633 35195229 + MGP_BALBcJ_P0049435 Rell2 protein_coding protein_coding MGP_BALBcJ_T0049436.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35191644 35193735 + MGP_BALBcJ_P0049436 Rell2 protein_coding protein_coding MGP_BALBcJ_T0049437.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35191680 35195220 + MGP_BALBcJ_P0049437 Rell2 protein_coding protein_coding MGP_BALBcJ_T0049438.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35192749 35194096 + Rell2 protein_coding retained_intron MGP_BALBcJ_T0049439.1 MGP_BALBcJ_G0024323.1 mouse_genomes_project 18 35192790 35194226 + Rell2 protein_coding retained_intron MGP_BALBcJ_T0001000.1 MGP_BALBcJ_G0000928.1 mouse_genomes_project 18 43479142 43479853 + TEC TEC MGP_BALBcJ_T0011422.1 MGP_BALBcJ_G0009547.1 mouse_genomes_project 18 733412 733735 + Gm24632 misc_RNA misc_RNA MGP_BALBcJ_T0049785.1 MGP_BALBcJ_G0024456.1 mouse_genomes_project 18 59713367 59863624 + MGP_BALBcJ_P0049785 Htr4 protein_coding protein_coding MGP_BALBcJ_T0017592.1 MGP_BALBcJ_G0015303.1 mouse_genomes_project 18 47336028 47346904 - C030005K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017593.1 MGP_BALBcJ_G0015303.1 mouse_genomes_project 18 47339451 47347088 - C030005K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017594.1 MGP_BALBcJ_G0015303.1 mouse_genomes_project 18 47345521 47347088 - C030005K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0017595.1 MGP_BALBcJ_G0015303.1 mouse_genomes_project 18 47345541 47346849 - C030005K06Rik processed_transcript processed_transcript MGP_BALBcJ_T0048877.1 MGP_BALBcJ_G0024092.1 mouse_genomes_project 18 3289418 3373247 - MGP_BALBcJ_P0048877 Epc1 protein_coding protein_coding MGP_BALBcJ_T0048878.1 MGP_BALBcJ_G0024092.1 mouse_genomes_project 18 3289420 3347935 - MGP_BALBcJ_P0048878 Epc1 protein_coding protein_coding MGP_BALBcJ_T0048879.1 MGP_BALBcJ_G0024092.1 mouse_genomes_project 18 3293059 3295365 - MGP_BALBcJ_P0048879 Epc1 protein_coding protein_coding MGP_BALBcJ_T0048880.1 MGP_BALBcJ_G0024092.1 mouse_genomes_project 18 3346238 3347935 - MGP_BALBcJ_P0048880 Epc1 protein_coding protein_coding MGP_BALBcJ_T0049575.1 MGP_BALBcJ_G0024375.1 mouse_genomes_project 18 43837392 43855621 - MGP_BALBcJ_P0049575 Ticam2 protein_coding protein_coding MGP_BALBcJ_T0049577.1 MGP_BALBcJ_G0024375.1 mouse_genomes_project 18 43852300 43855621 - Ticam2 protein_coding retained_intron MGP_BALBcJ_T0102367.1 MGP_BALBcJ_G0040183.1 mouse_genomes_project 18 40065 41811 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0049208.1 MGP_BALBcJ_G0024224.1 mouse_genomes_project 18 32451262 32629356 - MGP_BALBcJ_P0049208 Sil1 protein_coding protein_coding MGP_BALBcJ_T0049632.1 MGP_BALBcJ_G0024396.1 mouse_genomes_project 18 49964885 49983954 + MGP_BALBcJ_P0049632 1700034E13Rik protein_coding protein_coding MGP_BALBcJ_T0049633.1 MGP_BALBcJ_G0024396.1 mouse_genomes_project 18 49964892 49983954 + MGP_BALBcJ_P0049633 1700034E13Rik protein_coding protein_coding MGP_BALBcJ_T0050043.1 MGP_BALBcJ_G0024534.1 mouse_genomes_project 18 73825000 73888975 + MGP_BALBcJ_P0050043 Smad2 protein_coding protein_coding MGP_BALBcJ_T0050044.1 MGP_BALBcJ_G0024534.1 mouse_genomes_project 18 73825187 73889974 + MGP_BALBcJ_P0050044 Smad2 protein_coding protein_coding MGP_BALBcJ_T0050045.1 MGP_BALBcJ_G0024534.1 mouse_genomes_project 18 73825345 73882697 + MGP_BALBcJ_P0050045 Smad2 protein_coding protein_coding MGP_BALBcJ_T0050046.1 MGP_BALBcJ_G0024534.1 mouse_genomes_project 18 73849580 73886885 + MGP_BALBcJ_P0050046 Smad2 protein_coding protein_coding MGP_BALBcJ_T0050047.1 MGP_BALBcJ_G0024534.1 mouse_genomes_project 18 73849580 73884083 + MGP_BALBcJ_P0050047 Smad2 protein_coding protein_coding MGP_BALBcJ_T0050194.1 MGP_BALBcJ_G0024577.1 mouse_genomes_project 18 82537027 82541258 - MGP_BALBcJ_P0050194 Timm21 protein_coding protein_coding MGP_BALBcJ_T0007002.1 MGP_BALBcJ_G0005753.1 mouse_genomes_project 18 35475301 35488110 - 1700086O06Rik lincRNA lincRNA MGP_BALBcJ_T0007003.1 MGP_BALBcJ_G0005753.1 mouse_genomes_project 18 35475301 35487743 - 1700086O06Rik lincRNA lincRNA MGP_BALBcJ_T0050730.1 MGP_BALBcJ_G0024728.1 mouse_genomes_project 19 3248397 3262375 + MGP_BALBcJ_P0050730 Pygm protein_coding protein_coding MGP_BALBcJ_T0050731.1 MGP_BALBcJ_G0024728.1 mouse_genomes_project 19 3248413 3262364 + MGP_BALBcJ_P0050731 Pygm protein_coding protein_coding MGP_BALBcJ_T0050732.1 MGP_BALBcJ_G0024728.1 mouse_genomes_project 19 3256715 3258189 + Pygm protein_coding retained_intron MGP_BALBcJ_T0050733.1 MGP_BALBcJ_G0024728.1 mouse_genomes_project 19 3261410 3262207 + Pygm protein_coding retained_intron MGP_BALBcJ_T0007031.1 MGP_BALBcJ_G0005776.1 mouse_genomes_project 19 1956860 1957941 + Gm28901 lincRNA lincRNA MGP_BALBcJ_T0051750.1 MGP_BALBcJ_G0025108.1 mouse_genomes_project 19 39437832 39439212 + MGP_BALBcJ_P0051750 4933411K16Rik protein_coding protein_coding MGP_BALBcJ_T0099631.1 MGP_BALBcJ_G0037667.1 mouse_genomes_project 19 244097 244202 + Gm23940 snRNA snRNA MGP_BALBcJ_T0051554.1 MGP_BALBcJ_G0025044.1 mouse_genomes_project 19 33383178 33390949 - MGP_BALBcJ_P0051554 Ankrd1 protein_coding protein_coding MGP_BALBcJ_T0051307.1 MGP_BALBcJ_G0024953.1 mouse_genomes_project 19 18369794 18450534 - MGP_BALBcJ_P0051307 Gda protein_coding protein_coding MGP_BALBcJ_T0051308.1 MGP_BALBcJ_G0024953.1 mouse_genomes_project 19 18397158 18450632 - Gda protein_coding retained_intron MGP_BALBcJ_T0051613.1 MGP_BALBcJ_G0025063.1 mouse_genomes_project 19 35459484 35512717 + MGP_BALBcJ_P0051613 Pde6c protein_coding protein_coding MGP_BALBcJ_T0051614.1 MGP_BALBcJ_G0025063.1 mouse_genomes_project 19 35459484 35512717 + MGP_BALBcJ_P0051614 Pde6c protein_coding protein_coding MGP_BALBcJ_T0051615.1 MGP_BALBcJ_G0025063.1 mouse_genomes_project 19 35459649 35512509 + MGP_BALBcJ_P0051615 Pde6c protein_coding unknown_likely_coding MGP_BALBcJ_T0003830.1 MGP_BALBcJ_G0003434.1 mouse_genomes_project 19 2562364 2566785 + Gm16538 antisense antisense MGP_BALBcJ_T0050458.1 MGP_BALBcJ_G0024655.1 mouse_genomes_project 19 1883015 1885575 + MGP_BALBcJ_P0050458 Cd248 protein_coding protein_coding MGP_BALBcJ_T0052192.1 MGP_BALBcJ_G0025245.1 mouse_genomes_project 19 55089972 55128064 + MGP_BALBcJ_P0052192 Trub1 protein_coding protein_coding MGP_BALBcJ_T0052193.1 MGP_BALBcJ_G0025245.1 mouse_genomes_project 19 55089972 55125917 + MGP_BALBcJ_P0052193 Trub1 protein_coding protein_coding MGP_BALBcJ_T0011454.1 MGP_BALBcJ_G0009579.1 mouse_genomes_project 19 14033914 14034321 - Gm27970 misc_RNA misc_RNA MGP_BALBcJ_T0050476.1 MGP_BALBcJ_G0024661.1 mouse_genomes_project 19 1958457 2101865 - MGP_BALBcJ_P0050476 Pacs1 protein_coding protein_coding MGP_BALBcJ_T0010277.1 MGP_BALBcJ_G0008402.1 mouse_genomes_project 19 7044762 7044827 + Mir6993 miRNA miRNA MGP_BALBcJ_T0051165.1 MGP_BALBcJ_G0024863.1 mouse_genomes_project 19 8753433 8754593 - MGP_BALBcJ_P0051165 Olfr1419 protein_coding protein_coding MGP_BALBcJ_T0017675.1 MGP_BALBcJ_G0015325.1 mouse_genomes_project 19 25068098 25069595 + Gm20407 processed_transcript processed_transcript MGP_BALBcJ_T0051677.1 MGP_BALBcJ_G0025084.1 mouse_genomes_project 19 37963070 37978807 - MGP_BALBcJ_P0051677 Tctn3 protein_coding protein_coding MGP_BALBcJ_T0051678.1 MGP_BALBcJ_G0025084.1 mouse_genomes_project 19 37971663 37978777 - MGP_BALBcJ_P0051678 Tctn3 protein_coding protein_coding MGP_BALBcJ_T0051679.1 MGP_BALBcJ_G0025084.1 mouse_genomes_project 19 37973690 37978774 - MGP_BALBcJ_P0051679 Tctn3 protein_coding protein_coding MGP_BALBcJ_T0051680.1 MGP_BALBcJ_G0025084.1 mouse_genomes_project 19 37977698 37978762 - Tctn3 protein_coding retained_intron MGP_BALBcJ_T0050288.1 MGP_BALBcJ_G0024603.1 mouse_genomes_project 19 782817 789577 + MGP_BALBcJ_P0050288 Tbx10 protein_coding protein_coding MGP_BALBcJ_T0013354.1 MGP_BALBcJ_G0011451.1 mouse_genomes_project 19 5953943 5957291 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010261.1 MGP_BALBcJ_G0008386.1 mouse_genomes_project 19 1056997 1057058 - Mir6985 miRNA miRNA MGP_BALBcJ_T0052241.1 MGP_BALBcJ_G0025268.1 mouse_genomes_project 19 58526615 58552510 - MGP_BALBcJ_P0052241 Sfxn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052242.1 MGP_BALBcJ_G0025268.1 mouse_genomes_project 19 58528350 58552562 - MGP_BALBcJ_P0052242 Sfxn4 protein_coding protein_coding MGP_BALBcJ_T0052243.1 MGP_BALBcJ_G0025268.1 mouse_genomes_project 19 58528360 58552507 - MGP_BALBcJ_P0052243 Sfxn4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051345.1 MGP_BALBcJ_G0024973.1 mouse_genomes_project 19 21727452 21903160 - MGP_BALBcJ_P0051345 Pgm5 protein_coding protein_coding MGP_BALBcJ_T0051346.1 MGP_BALBcJ_G0024973.1 mouse_genomes_project 19 21729019 21806801 - Pgm5 protein_coding processed_transcript MGP_BALBcJ_T0051347.1 MGP_BALBcJ_G0024973.1 mouse_genomes_project 19 21859189 21902992 - Pgm5 protein_coding retained_intron MGP_BALBcJ_T0051348.1 MGP_BALBcJ_G0024973.1 mouse_genomes_project 19 21859290 21902957 - Pgm5 protein_coding retained_intron MGP_BALBcJ_T0010270.1 MGP_BALBcJ_G0008395.1 mouse_genomes_project 19 3700255 3700314 - Mir5046 miRNA miRNA MGP_BALBcJ_T0017663.1 MGP_BALBcJ_G0015320.1 mouse_genomes_project 19 7598094 7646305 + A430093F15Rik processed_transcript lincRNA MGP_BALBcJ_T0017664.1 MGP_BALBcJ_G0015320.1 mouse_genomes_project 19 7598098 7646296 + A430093F15Rik processed_transcript lincRNA MGP_BALBcJ_T0017665.1 MGP_BALBcJ_G0015320.1 mouse_genomes_project 19 7598107 7645939 + A430093F15Rik processed_transcript lincRNA MGP_BALBcJ_T0017666.1 MGP_BALBcJ_G0015320.1 mouse_genomes_project 19 7606182 7616102 + A430093F15Rik processed_transcript retained_intron MGP_BALBcJ_T0017667.1 MGP_BALBcJ_G0015320.1 mouse_genomes_project 19 7642176 7646301 + A430093F15Rik processed_transcript lincRNA MGP_BALBcJ_T0017668.1 MGP_BALBcJ_G0015320.1 mouse_genomes_project 19 7645613 7646298 + A430093F15Rik processed_transcript retained_intron MGP_BALBcJ_T0051653.1 MGP_BALBcJ_G0025078.1 mouse_genomes_project 19 37384811 37423456 - MGP_BALBcJ_P0051653 Cyp2c54 protein_coding protein_coding MGP_BALBcJ_T0051292.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17367695 17385618 - MGP_BALBcJ_P0051292 Anxa1 protein_coding protein_coding MGP_BALBcJ_T0051293.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17367823 17385346 - Anxa1 protein_coding processed_transcript MGP_BALBcJ_T0051294.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17367823 17370285 - Anxa1 protein_coding retained_intron MGP_BALBcJ_T0051295.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17372375 17373269 - Anxa1 protein_coding retained_intron MGP_BALBcJ_T0051296.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17372375 17374701 - Anxa1 protein_coding retained_intron MGP_BALBcJ_T0051297.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17372797 17376805 - Anxa1 protein_coding retained_intron MGP_BALBcJ_T0051298.1 MGP_BALBcJ_G0024948.1 mouse_genomes_project 19 17374338 17385325 - Anxa1 protein_coding processed_transcript MGP_BALBcJ_T0051475.1 MGP_BALBcJ_G0025008.1 mouse_genomes_project 19 27209440 27286893 - MGP_BALBcJ_P0051475 Gldc protein_coding protein_coding MGP_BALBcJ_T0050810.1 MGP_BALBcJ_G0024745.1 mouse_genomes_project 19 3860557 3866001 - MGP_BALBcJ_P0050810 Dnajc4 protein_coding protein_coding MGP_BALBcJ_T0052014.1 MGP_BALBcJ_G0025199.1 mouse_genomes_project 19 44675555 44759169 + MGP_BALBcJ_P0052014 Neurl1a protein_coding protein_coding MGP_BALBcJ_T0052015.1 MGP_BALBcJ_G0025199.1 mouse_genomes_project 19 44727640 44759169 + MGP_BALBcJ_P0052015 Neurl1a protein_coding protein_coding MGP_BALBcJ_T0051283.1 MGP_BALBcJ_G0024944.1 mouse_genomes_project 19 15651365 15685831 + MGP_BALBcJ_P0051283 Carnmt1 protein_coding protein_coding MGP_BALBcJ_T0050443.1 MGP_BALBcJ_G0024647.1 mouse_genomes_project 19 1719779 1740622 - MGP_BALBcJ_P0050443 Dpp3 protein_coding protein_coding MGP_BALBcJ_T0003833.1 MGP_BALBcJ_G0003436.1 mouse_genomes_project 19 3219005 3227051 - Gm14966 antisense antisense MGP_BALBcJ_T0003834.1 MGP_BALBcJ_G0003436.1 mouse_genomes_project 19 3219081 3227275 - Gm14966 antisense antisense MGP_BALBcJ_T0051439.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26624782 26715414 + MGP_BALBcJ_P0051439 Ric1 protein_coding protein_coding MGP_BALBcJ_T0051440.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26624835 26669905 + MGP_BALBcJ_P0051440 Ric1 protein_coding protein_coding MGP_BALBcJ_T0051441.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26624882 26687766 + Ric1 protein_coding retained_intron MGP_BALBcJ_T0051442.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26636038 26712803 + MGP_BALBcJ_P0051442 Ric1 protein_coding protein_coding MGP_BALBcJ_T0051443.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26703021 26713788 + MGP_BALBcJ_P0051443 Ric1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051444.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26704753 26708500 + Ric1 protein_coding retained_intron MGP_BALBcJ_T0051445.1 MGP_BALBcJ_G0025000.1 mouse_genomes_project 19 26705338 26714499 + MGP_BALBcJ_P0051445 Ric1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0011452.1 MGP_BALBcJ_G0009577.1 mouse_genomes_project 19 2680264 2680386 - Gm28006 misc_RNA misc_RNA MGP_BALBcJ_T0050878.1 MGP_BALBcJ_G0024768.1 mouse_genomes_project 19 5643109 5663689 + MGP_BALBcJ_P0050878 Slc22a8 protein_coding protein_coding MGP_BALBcJ_T0050879.1 MGP_BALBcJ_G0024768.1 mouse_genomes_project 19 5643109 5663689 + MGP_BALBcJ_P0050879 Slc22a8 protein_coding protein_coding MGP_BALBcJ_T0051511.1 MGP_BALBcJ_G0025021.1 mouse_genomes_project 19 30586598 31028594 - MGP_BALBcJ_P0051511 Lipo1 protein_coding protein_coding MGP_BALBcJ_T0051512.1 MGP_BALBcJ_G0025021.1 mouse_genomes_project 19 30590552 31028594 - MGP_BALBcJ_P0051512 Lipo1 protein_coding protein_coding MGP_BALBcJ_T0051350.1 MGP_BALBcJ_G0024975.1 mouse_genomes_project 19 21953000 21995571 - MGP_BALBcJ_P0051350 Cbwd1 protein_coding protein_coding MGP_BALBcJ_T0051032.1 MGP_BALBcJ_G0024813.1 mouse_genomes_project 19 7327278 7335921 - MGP_BALBcJ_P0051032 Ppp1r32 protein_coding protein_coding MGP_BALBcJ_T0051705.1 MGP_BALBcJ_G0025093.1 mouse_genomes_project 19 38640817 38758335 - MGP_BALBcJ_P0051705 Pik3ap1 protein_coding protein_coding MGP_BALBcJ_T0050859.1 MGP_BALBcJ_G0024760.1 mouse_genomes_project 19 4386022 4431201 + MGP_BALBcJ_P0050859 Atl3 protein_coding protein_coding MGP_BALBcJ_T0050860.1 MGP_BALBcJ_G0024760.1 mouse_genomes_project 19 4386420 4431201 + MGP_BALBcJ_P0050860 Atl3 protein_coding protein_coding MGP_BALBcJ_T0052157.1 MGP_BALBcJ_G0025240.1 mouse_genomes_project 19 54454073 54497294 + MGP_BALBcJ_P0052157 Tdrd1 protein_coding protein_coding MGP_BALBcJ_T0052158.1 MGP_BALBcJ_G0025240.1 mouse_genomes_project 19 54454139 54497294 + MGP_BALBcJ_P0052158 Tdrd1 protein_coding protein_coding MGP_BALBcJ_T0052159.1 MGP_BALBcJ_G0025240.1 mouse_genomes_project 19 54454150 54497294 + MGP_BALBcJ_P0052159 Tdrd1 protein_coding protein_coding MGP_BALBcJ_T0052160.1 MGP_BALBcJ_G0025240.1 mouse_genomes_project 19 54458890 54497294 + MGP_BALBcJ_P0052160 Tdrd1 protein_coding protein_coding MGP_BALBcJ_T0010308.1 MGP_BALBcJ_G0008433.1 mouse_genomes_project 19 55698612 55698682 + Mir5623 miRNA miRNA MGP_BALBcJ_T0052075.1 MGP_BALBcJ_G0025215.1 mouse_genomes_project 19 50893683 50958870 + MGP_BALBcJ_P0052075 Mxi1 protein_coding protein_coding MGP_BALBcJ_T0052076.1 MGP_BALBcJ_G0025215.1 mouse_genomes_project 19 50913182 50956352 + MGP_BALBcJ_P0052076 Mxi1 protein_coding protein_coding MGP_BALBcJ_T0051567.1 MGP_BALBcJ_G0025047.1 mouse_genomes_project 19 34011123 34016040 - MGP_BALBcJ_P0051567 Ppp1r3c protein_coding protein_coding MGP_BALBcJ_T0051116.1 MGP_BALBcJ_G0024845.1 mouse_genomes_project 19 8231839 8249046 + MGP_BALBcJ_P0051116 Ms4a4a protein_coding protein_coding MGP_BALBcJ_T0051120.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8300772 8319031 + Ms4a4b protein_coding retained_intron MGP_BALBcJ_T0051121.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8300772 8380804 + Ms4a4b protein_coding retained_intron MGP_BALBcJ_T0051122.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8300777 8319031 + Ms4a4b protein_coding retained_intron MGP_BALBcJ_T0051123.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8300792 8322101 + MGP_BALBcJ_P0051123 Ms4a4b protein_coding protein_coding MGP_BALBcJ_T0051124.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8319691 8321841 + Ms4a4b protein_coding retained_intron MGP_BALBcJ_T0051125.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8319807 8321841 + Ms4a4b protein_coding processed_transcript MGP_BALBcJ_T0051126.1 MGP_BALBcJ_G0024847.1 mouse_genomes_project 19 8321041 8321841 + Ms4a4b protein_coding retained_intron MGP_BALBcJ_T0050212.1 MGP_BALBcJ_G0024586.1 mouse_genomes_project 19 13933 35729 - MGP_BALBcJ_P0050212 Ighmbp2 protein_coding protein_coding MGP_BALBcJ_T0050213.1 MGP_BALBcJ_G0024586.1 mouse_genomes_project 19 17806 35923 - MGP_BALBcJ_P0050213 Ighmbp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050214.1 MGP_BALBcJ_G0024586.1 mouse_genomes_project 19 18352 20769 - Ighmbp2 protein_coding retained_intron MGP_BALBcJ_T0051719.1 MGP_BALBcJ_G0025099.1 mouse_genomes_project 19 39222689 39224844 - MGP_BALBcJ_P0051719 Frat2 protein_coding protein_coding MGP_BALBcJ_T0051319.1 MGP_BALBcJ_G0024957.1 mouse_genomes_project 19 18766693 18846951 + MGP_BALBcJ_P0051319 Tmem2 protein_coding protein_coding MGP_BALBcJ_T0051320.1 MGP_BALBcJ_G0024957.1 mouse_genomes_project 19 18766693 18846951 + MGP_BALBcJ_P0051320 Tmem2 protein_coding protein_coding MGP_BALBcJ_T0051218.1 MGP_BALBcJ_G0024901.1 mouse_genomes_project 19 9953316 9954270 - MGP_BALBcJ_P0051218 Olfr1457 protein_coding protein_coding MGP_BALBcJ_T0050500.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2302358 2305953 + MGP_BALBcJ_P0050500 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050501.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2302700 2304450 + MGP_BALBcJ_P0050501 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050502.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303073 2310226 + MGP_BALBcJ_P0050502 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050503.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303092 2306739 + Efemp2 protein_coding retained_intron MGP_BALBcJ_T0050504.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303121 2309114 + MGP_BALBcJ_P0050504 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050505.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303121 2310226 + MGP_BALBcJ_P0050505 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050506.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303128 2306631 + MGP_BALBcJ_P0050506 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050507.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303131 2310226 + MGP_BALBcJ_P0050507 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050508.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303158 2303850 + Efemp2 protein_coding retained_intron MGP_BALBcJ_T0050509.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303449 2306695 + MGP_BALBcJ_P0050509 Efemp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050510.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303501 2310148 + MGP_BALBcJ_P0050510 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050511.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2303686 2308452 + MGP_BALBcJ_P0050511 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050512.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2308417 2309289 + MGP_BALBcJ_P0050512 Efemp2 protein_coding protein_coding MGP_BALBcJ_T0050513.1 MGP_BALBcJ_G0024676.1 mouse_genomes_project 19 2308495 2310032 + MGP_BALBcJ_P0050513 Efemp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051171.1 MGP_BALBcJ_G0024869.1 mouse_genomes_project 19 9003963 9004901 - MGP_BALBcJ_P0051171 Olfr1427 protein_coding protein_coding MGP_BALBcJ_T0051883.1 MGP_BALBcJ_G0025155.1 mouse_genomes_project 19 42526625 42530675 + MGP_BALBcJ_P0051883 Kazald1 protein_coding protein_coding MGP_BALBcJ_T0051884.1 MGP_BALBcJ_G0025155.1 mouse_genomes_project 19 42527523 42530675 + MGP_BALBcJ_P0051884 Kazald1 protein_coding protein_coding MGP_BALBcJ_T0051352.1 MGP_BALBcJ_G0024977.1 mouse_genomes_project 19 22280467 22483073 + MGP_BALBcJ_P0051352 Kank1 protein_coding protein_coding MGP_BALBcJ_T0051353.1 MGP_BALBcJ_G0024977.1 mouse_genomes_project 19 22443709 22458223 + Kank1 protein_coding processed_transcript MGP_BALBcJ_T0051354.1 MGP_BALBcJ_G0024977.1 mouse_genomes_project 19 22455101 22474621 + MGP_BALBcJ_P0051354 Kank1 protein_coding protein_coding MGP_BALBcJ_T0051355.1 MGP_BALBcJ_G0024977.1 mouse_genomes_project 19 22470941 22473213 + Kank1 protein_coding retained_intron MGP_BALBcJ_T0052133.1 MGP_BALBcJ_G0025233.1 mouse_genomes_project 19 53949758 54019821 - MGP_BALBcJ_P0052133 Nrap protein_coding protein_coding MGP_BALBcJ_T0052134.1 MGP_BALBcJ_G0025233.1 mouse_genomes_project 19 53949764 54019847 - MGP_BALBcJ_P0052134 Nrap protein_coding protein_coding MGP_BALBcJ_T0052135.1 MGP_BALBcJ_G0025233.1 mouse_genomes_project 19 53949824 54019845 - MGP_BALBcJ_P0052135 Nrap protein_coding protein_coding MGP_BALBcJ_T0052136.1 MGP_BALBcJ_G0025233.1 mouse_genomes_project 19 53949849 54019845 - MGP_BALBcJ_P0052136 Nrap protein_coding protein_coding MGP_BALBcJ_T0052137.1 MGP_BALBcJ_G0025233.1 mouse_genomes_project 19 53949915 54009716 - MGP_BALBcJ_P0052137 Nrap protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052138.1 MGP_BALBcJ_G0025233.1 mouse_genomes_project 19 53949918 54019687 - MGP_BALBcJ_P0052138 Nrap protein_coding protein_coding MGP_BALBcJ_T0050434.1 MGP_BALBcJ_G0024644.1 mouse_genomes_project 19 1673118 1675454 - Actn3 protein_coding processed_transcript MGP_BALBcJ_T0050435.1 MGP_BALBcJ_G0024644.1 mouse_genomes_project 19 1673118 1690391 - MGP_BALBcJ_P0050435 Actn3 protein_coding protein_coding MGP_BALBcJ_T0051213.1 MGP_BALBcJ_G0024896.1 mouse_genomes_project 19 9781268 9782216 + MGP_BALBcJ_P0051213 Olfr1449 protein_coding protein_coding MGP_BALBcJ_T0051752.1 MGP_BALBcJ_G0025110.1 mouse_genomes_project 19 39482640 39515715 + MGP_BALBcJ_P0051752 Pi4k2a protein_coding protein_coding MGP_BALBcJ_T0051852.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41989288 41996143 - MGP_BALBcJ_P0051852 Ndufb8 protein_coding protein_coding MGP_BALBcJ_T0051853.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41990956 41996157 - MGP_BALBcJ_P0051853 Ndufb8 protein_coding protein_coding MGP_BALBcJ_T0051854.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41990969 41996136 - MGP_BALBcJ_P0051854 Ndufb8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051855.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41990971 41993597 - Ndufb8 protein_coding retained_intron MGP_BALBcJ_T0051856.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41993338 41995703 - MGP_BALBcJ_P0051856 Ndufb8 protein_coding protein_coding MGP_BALBcJ_T0051857.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41993556 41996121 - MGP_BALBcJ_P0051857 Ndufb8 protein_coding protein_coding MGP_BALBcJ_T0051858.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41993991 41996122 - Ndufb8 protein_coding retained_intron MGP_BALBcJ_T0051859.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41995417 41996143 - Ndufb8 protein_coding retained_intron MGP_BALBcJ_T0051860.1 MGP_BALBcJ_G0025145.1 mouse_genomes_project 19 41995431 41996140 - Ndufb8 protein_coding retained_intron MGP_BALBcJ_T0051238.1 MGP_BALBcJ_G0024921.1 mouse_genomes_project 19 10681399 10682488 + MGP_BALBcJ_P0051238 Olfr1495 protein_coding protein_coding MGP_BALBcJ_T0098355.1 MGP_BALBcJ_G0036409.1 mouse_genomes_project 19 57891748 57893090 + pseudogene pseudogene MGP_BALBcJ_T0050798.1 MGP_BALBcJ_G0024740.1 mouse_genomes_project 19 3812310 3823591 + MGP_BALBcJ_P0050798 Bad protein_coding protein_coding MGP_BALBcJ_T0050799.1 MGP_BALBcJ_G0024740.1 mouse_genomes_project 19 3812772 3823585 + MGP_BALBcJ_P0050799 Bad protein_coding protein_coding MGP_BALBcJ_T0050800.1 MGP_BALBcJ_G0024740.1 mouse_genomes_project 19 3812950 3823586 + MGP_BALBcJ_P0050800 Bad protein_coding protein_coding MGP_BALBcJ_T0050801.1 MGP_BALBcJ_G0024740.1 mouse_genomes_project 19 3813328 3822945 + MGP_BALBcJ_P0050801 Bad protein_coding protein_coding MGP_BALBcJ_T0050802.1 MGP_BALBcJ_G0024740.1 mouse_genomes_project 19 3822459 3823567 + MGP_BALBcJ_P0050802 Bad protein_coding protein_coding MGP_BALBcJ_T0051334.1 MGP_BALBcJ_G0024965.1 mouse_genomes_project 19 20741009 20742767 + MGP_BALBcJ_P0051334 Gm9938 protein_coding protein_coding MGP_BALBcJ_T0051194.1 MGP_BALBcJ_G0024885.1 mouse_genomes_project 19 9510273 9511338 + MGP_BALBcJ_P0051194 Olfr1442 protein_coding protein_coding MGP_BALBcJ_T0051704.1 MGP_BALBcJ_G0025092.1 mouse_genomes_project 19 38577219 38630361 - MGP_BALBcJ_P0051704 Tm9sf3 protein_coding protein_coding MGP_BALBcJ_T0102375.1 MGP_BALBcJ_G0040191.1 mouse_genomes_project 19 9064115 9065030 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0052195.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 55882808 56103073 - MGP_BALBcJ_P0052195 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052196.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 55882816 56102267 - MGP_BALBcJ_P0052196 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052197.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 55883896 56102141 - MGP_BALBcJ_P0052197 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052198.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 55885362 56103034 - MGP_BALBcJ_P0052198 Gfra1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052199.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 55885362 56102976 - MGP_BALBcJ_P0052199 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052200.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 56101010 56102681 - MGP_BALBcJ_P0052200 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052201.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 56101027 56103584 - MGP_BALBcJ_P0052201 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052202.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 56101096 56102295 - MGP_BALBcJ_P0052202 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0052203.1 MGP_BALBcJ_G0025247.1 mouse_genomes_project 19 56101998 56102836 - MGP_BALBcJ_P0052203 Gfra1 protein_coding protein_coding MGP_BALBcJ_T0050572.1 MGP_BALBcJ_G0024696.1 mouse_genomes_project 19 2713349 2721299 + MGP_BALBcJ_P0050572 Slc25a45 protein_coding protein_coding MGP_BALBcJ_T0050573.1 MGP_BALBcJ_G0024696.1 mouse_genomes_project 19 2714160 2716129 + MGP_BALBcJ_P0050573 Slc25a45 protein_coding protein_coding MGP_BALBcJ_T0050574.1 MGP_BALBcJ_G0024696.1 mouse_genomes_project 19 2714187 2720524 + MGP_BALBcJ_P0050574 Slc25a45 protein_coding protein_coding MGP_BALBcJ_T0050575.1 MGP_BALBcJ_G0024696.1 mouse_genomes_project 19 2714188 2720018 + MGP_BALBcJ_P0050575 Slc25a45 protein_coding protein_coding MGP_BALBcJ_T0050289.1 MGP_BALBcJ_G0024604.1 mouse_genomes_project 19 790645 792169 + MGP_BALBcJ_P0050289 Nudt8 protein_coding protein_coding MGP_BALBcJ_T0050290.1 MGP_BALBcJ_G0024604.1 mouse_genomes_project 19 790691 795871 + MGP_BALBcJ_P0050290 Nudt8 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050291.1 MGP_BALBcJ_G0024604.1 mouse_genomes_project 19 790696 792167 + MGP_BALBcJ_P0050291 Nudt8 protein_coding protein_coding MGP_BALBcJ_T0051515.1 MGP_BALBcJ_G0025023.1 mouse_genomes_project 19 31213377 31228942 + MGP_BALBcJ_P0051515 Lipf protein_coding protein_coding MGP_BALBcJ_T0051601.1 MGP_BALBcJ_G0025056.1 mouse_genomes_project 19 34858546 34989389 + MGP_BALBcJ_P0051601 Exoc6 protein_coding protein_coding MGP_BALBcJ_T0051175.1 MGP_BALBcJ_G0024873.1 mouse_genomes_project 19 9107785 9111103 + MGP_BALBcJ_P0051175 protein_coding protein_coding MGP_BALBcJ_T0007075.1 MGP_BALBcJ_G0005806.1 mouse_genomes_project 19 42743572 42756428 - Gm29595 lincRNA lincRNA MGP_BALBcJ_T0007076.1 MGP_BALBcJ_G0005806.1 mouse_genomes_project 19 42743581 42746043 - Gm29595 lincRNA lincRNA MGP_BALBcJ_T0051721.1 MGP_BALBcJ_G0025101.1 mouse_genomes_project 19 39290161 39298609 + MGP_BALBcJ_P0051721 Pgam1 protein_coding protein_coding MGP_BALBcJ_T0013376.1 MGP_BALBcJ_G0011473.1 mouse_genomes_project 19 44153927 44154934 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010281.1 MGP_BALBcJ_G0008406.1 mouse_genomes_project 19 14880462 14880555 - Gm23063 miRNA miRNA MGP_BALBcJ_T0050357.1 MGP_BALBcJ_G0024619.1 mouse_genomes_project 19 955526 966682 - MGP_BALBcJ_P0050357 Carns1 protein_coding protein_coding MGP_BALBcJ_T0051321.1 MGP_BALBcJ_G0024958.1 mouse_genomes_project 19 19142065 19987885 + MGP_BALBcJ_P0051321 Trpm3 protein_coding protein_coding MGP_BALBcJ_T0051322.1 MGP_BALBcJ_G0024958.1 mouse_genomes_project 19 19142065 19987885 + MGP_BALBcJ_P0051322 Trpm3 protein_coding protein_coding MGP_BALBcJ_T0051323.1 MGP_BALBcJ_G0024958.1 mouse_genomes_project 19 19142065 19987885 + MGP_BALBcJ_P0051323 Trpm3 protein_coding protein_coding MGP_BALBcJ_T0051324.1 MGP_BALBcJ_G0024958.1 mouse_genomes_project 19 19450508 19987887 + MGP_BALBcJ_P0051324 Trpm3 protein_coding protein_coding MGP_BALBcJ_T0051325.1 MGP_BALBcJ_G0024958.1 mouse_genomes_project 19 19693868 19768069 + MGP_BALBcJ_P0051325 Trpm3 protein_coding protein_coding MGP_BALBcJ_T0051326.1 MGP_BALBcJ_G0024958.1 mouse_genomes_project 19 19693868 19924320 + MGP_BALBcJ_P0051326 Trpm3 protein_coding protein_coding MGP_BALBcJ_T0013350.1 MGP_BALBcJ_G0011447.1 mouse_genomes_project 19 4557846 4558353 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051344.1 MGP_BALBcJ_G0024972.1 mouse_genomes_project 19 21718563 21724108 + MGP_BALBcJ_P0051344 Tmem252 protein_coding protein_coding MGP_BALBcJ_T0051236.1 MGP_BALBcJ_G0024919.1 mouse_genomes_project 19 10612664 10613624 + MGP_BALBcJ_P0051236 Olfr1491 protein_coding protein_coding MGP_BALBcJ_T0051650.1 MGP_BALBcJ_G0025076.1 mouse_genomes_project 19 36854723 36911567 + MGP_BALBcJ_P0051650 Cyp2c39 protein_coding protein_coding MGP_BALBcJ_T0052232.1 MGP_BALBcJ_G0025265.1 mouse_genomes_project 19 58441119 58445050 + MGP_BALBcJ_P0052232 Nanos1 protein_coding protein_coding MGP_BALBcJ_T0050868.1 MGP_BALBcJ_G0024763.1 mouse_genomes_project 19 4508180 4510387 + Hrasls5 protein_coding retained_intron MGP_BALBcJ_T0050869.1 MGP_BALBcJ_G0024763.1 mouse_genomes_project 19 4508194 4533256 + MGP_BALBcJ_P0050869 Hrasls5 protein_coding protein_coding MGP_BALBcJ_T0050870.1 MGP_BALBcJ_G0024763.1 mouse_genomes_project 19 4508244 4533655 + MGP_BALBcJ_P0050870 Hrasls5 protein_coding protein_coding MGP_BALBcJ_T0007077.1 MGP_BALBcJ_G0005807.1 mouse_genomes_project 19 42756716 42757664 - Gm29593 lincRNA lincRNA MGP_BALBcJ_T0003857.1 MGP_BALBcJ_G0003452.1 mouse_genomes_project 19 42599158 42604216 - Tlx1os antisense antisense MGP_BALBcJ_T0051359.1 MGP_BALBcJ_G0024979.1 mouse_genomes_project 19 22665995 22679690 + MGP_BALBcJ_P0051359 Dmrt3 protein_coding protein_coding MGP_BALBcJ_T0051221.1 MGP_BALBcJ_G0024904.1 mouse_genomes_project 19 10014842 10015781 + MGP_BALBcJ_P0051221 Olfr1461 protein_coding protein_coding MGP_BALBcJ_T0098356.1 MGP_BALBcJ_G0036410.1 mouse_genomes_project 19 58648365 58648948 - pseudogene pseudogene MGP_BALBcJ_T0011457.1 MGP_BALBcJ_G0009582.1 mouse_genomes_project 19 27377541 27377822 + Gm24883 misc_RNA misc_RNA MGP_BALBcJ_T0052100.1 MGP_BALBcJ_G0025227.1 mouse_genomes_project 19 52806821 52852273 - MGP_BALBcJ_P0052100 Gucy2g protein_coding protein_coding MGP_BALBcJ_T0051553.1 MGP_BALBcJ_G0025043.1 mouse_genomes_project 19 33354871 33376157 + MGP_BALBcJ_P0051553 Rpp30 protein_coding protein_coding MGP_BALBcJ_T0052048.1 MGP_BALBcJ_G0025207.1 mouse_genomes_project 19 45381492 45402238 + MGP_BALBcJ_P0052048 Gsto2 protein_coding protein_coding MGP_BALBcJ_T0052049.1 MGP_BALBcJ_G0025207.1 mouse_genomes_project 19 45381714 45402238 + MGP_BALBcJ_P0052049 Gsto2 protein_coding protein_coding MGP_BALBcJ_T0052050.1 MGP_BALBcJ_G0025207.1 mouse_genomes_project 19 45386197 45400620 + MGP_BALBcJ_P0052050 Gsto2 protein_coding protein_coding MGP_BALBcJ_T0050567.1 MGP_BALBcJ_G0024694.1 mouse_genomes_project 19 2593792 2606927 - MGP_BALBcJ_P0050567 Scyl1 protein_coding protein_coding MGP_BALBcJ_T0051649.1 MGP_BALBcJ_G0025075.1 mouse_genomes_project 19 36706505 36779062 - MGP_BALBcJ_P0051649 protein_coding protein_coding MGP_BALBcJ_T0052162.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54539395 54635714 - MGP_BALBcJ_P0052162 Afap1l2 protein_coding unknown_likely_coding MGP_BALBcJ_T0052163.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54539407 54635746 - MGP_BALBcJ_P0052163 Afap1l2 protein_coding protein_coding MGP_BALBcJ_T0052164.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54539407 54635758 - MGP_BALBcJ_P0052164 Afap1l2 protein_coding protein_coding MGP_BALBcJ_T0052165.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54539407 54635776 - MGP_BALBcJ_P0052165 Afap1l2 protein_coding protein_coding MGP_BALBcJ_T0052166.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54547445 54555618 - Afap1l2 protein_coding retained_intron MGP_BALBcJ_T0052167.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54550594 54635776 - MGP_BALBcJ_P0052167 Afap1l2 protein_coding protein_coding MGP_BALBcJ_T0052168.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54557120 54628541 - MGP_BALBcJ_P0052168 Afap1l2 protein_coding protein_coding MGP_BALBcJ_T0052169.1 MGP_BALBcJ_G0025242.1 mouse_genomes_project 19 54569329 54635756 - Afap1l2 protein_coding retained_intron MGP_BALBcJ_T0051049.1 MGP_BALBcJ_G0024824.1 mouse_genomes_project 19 7575414 7596228 - MGP_BALBcJ_P0051049 Cd5 protein_coding protein_coding MGP_BALBcJ_T0051042.1 MGP_BALBcJ_G0024818.1 mouse_genomes_project 19 7430877 7442347 + MGP_BALBcJ_P0051042 Cyb561a3 protein_coding protein_coding MGP_BALBcJ_T0100915.1 MGP_BALBcJ_G0038951.1 mouse_genomes_project 19 41533485 41533631 - Gm24336 snoRNA snoRNA MGP_BALBcJ_T0010292.1 MGP_BALBcJ_G0008417.1 mouse_genomes_project 19 36357935 36357999 - Gm23800 miRNA miRNA MGP_BALBcJ_T0010285.1 MGP_BALBcJ_G0008410.1 mouse_genomes_project 19 27374466 27374543 - Gm24108 miRNA miRNA MGP_BALBcJ_T0100921.1 MGP_BALBcJ_G0038957.1 mouse_genomes_project 19 58694208 58694337 - Gm22520 snoRNA snoRNA MGP_BALBcJ_T0051885.1 MGP_BALBcJ_G0025156.1 mouse_genomes_project 19 42595772 42602033 + MGP_BALBcJ_P0051885 Tlx1 protein_coding protein_coding MGP_BALBcJ_T0051886.1 MGP_BALBcJ_G0025156.1 mouse_genomes_project 19 42596561 42601489 + MGP_BALBcJ_P0051886 Tlx1 protein_coding protein_coding MGP_BALBcJ_T0051237.1 MGP_BALBcJ_G0024920.1 mouse_genomes_project 19 10658136 10659084 + MGP_BALBcJ_P0051237 Olfr1494 protein_coding protein_coding MGP_BALBcJ_T0051301.1 MGP_BALBcJ_G0024951.1 mouse_genomes_project 19 17764274 17936893 - MGP_BALBcJ_P0051301 Tmc1 protein_coding protein_coding MGP_BALBcJ_T0010296.1 MGP_BALBcJ_G0008421.1 mouse_genomes_project 19 39673656 39673745 - Mir3085 miRNA miRNA MGP_BALBcJ_T0051950.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43624947 43762319 + MGP_BALBcJ_P0051950 Gbf1 protein_coding protein_coding MGP_BALBcJ_T0051951.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43624968 43731716 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0051952.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43624986 43743905 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0051953.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43625011 43721953 + Gbf1 protein_coding processed_transcript MGP_BALBcJ_T0051954.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43721853 43762318 + MGP_BALBcJ_P0051954 Gbf1 protein_coding protein_coding MGP_BALBcJ_T0051955.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43729785 43735484 + MGP_BALBcJ_P0051955 Gbf1 protein_coding protein_coding MGP_BALBcJ_T0051957.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43744515 43746430 + Gbf1 protein_coding processed_transcript MGP_BALBcJ_T0051958.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43745436 43749119 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0051959.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43755680 43756817 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0051960.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43755987 43759491 + MGP_BALBcJ_P0051960 Gbf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051961.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43756142 43759294 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0051962.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43758651 43759835 + Gbf1 protein_coding processed_transcript MGP_BALBcJ_T0051963.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43758809 43759749 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0051964.1 MGP_BALBcJ_G0025173.1 mouse_genomes_project 19 43760371 43761789 + Gbf1 protein_coding retained_intron MGP_BALBcJ_T0101878.1 MGP_BALBcJ_G0039781.1 mouse_genomes_project 19 36583112 36612101 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101879.1 MGP_BALBcJ_G0039781.1 mouse_genomes_project 19 36583142 36612058 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0101880.1 MGP_BALBcJ_G0039781.1 mouse_genomes_project 19 36608845 36612349 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0051177.1 MGP_BALBcJ_G0024875.1 mouse_genomes_project 19 9122328 9130172 + MGP_BALBcJ_P0051177 Olfr1434 protein_coding protein_coding MGP_BALBcJ_T0003825.1 MGP_BALBcJ_G0003432.1 mouse_genomes_project 19 1614807 1619080 + Gm21844 antisense antisense MGP_BALBcJ_T0051521.1 MGP_BALBcJ_G0025027.1 mouse_genomes_project 19 31372315 31411096 - MGP_BALBcJ_P0051521 Ankrd22 protein_coding protein_coding MGP_BALBcJ_T0051522.1 MGP_BALBcJ_G0025027.1 mouse_genomes_project 19 31372691 31405855 - Ankrd22 protein_coding processed_transcript MGP_BALBcJ_T0051523.1 MGP_BALBcJ_G0025027.1 mouse_genomes_project 19 31372691 31383059 - Ankrd22 protein_coding processed_transcript MGP_BALBcJ_T0050483.1 MGP_BALBcJ_G0024667.1 mouse_genomes_project 19 2196123 2200829 + MGP_BALBcJ_P0050483 Eif1ad protein_coding protein_coding MGP_BALBcJ_T0051829.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41492333 41526987 - MGP_BALBcJ_P0051829 Chuk protein_coding protein_coding MGP_BALBcJ_T0051830.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41492334 41526984 - MGP_BALBcJ_P0051830 Chuk protein_coding protein_coding MGP_BALBcJ_T0051831.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41493371 41494903 - Chuk protein_coding retained_intron MGP_BALBcJ_T0051832.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41496419 41504079 - Chuk protein_coding retained_intron MGP_BALBcJ_T0051833.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41497452 41498445 - Chuk protein_coding retained_intron MGP_BALBcJ_T0051834.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41500575 41526976 - Chuk protein_coding retained_intron MGP_BALBcJ_T0051835.1 MGP_BALBcJ_G0025134.1 mouse_genomes_project 19 41516707 41526789 - Chuk protein_coding retained_intron MGP_BALBcJ_T0050526.1 MGP_BALBcJ_G0024679.1 mouse_genomes_project 19 2324667 2339875 - MGP_BALBcJ_P0050526 Snx32 protein_coding protein_coding MGP_BALBcJ_T0051539.1 MGP_BALBcJ_G0025036.1 mouse_genomes_project 19 31848257 31850237 + MGP_BALBcJ_P0051539 protein_coding protein_coding MGP_BALBcJ_T0051508.1 MGP_BALBcJ_G0025020.1 mouse_genomes_project 19 30309652 30568480 - MGP_BALBcJ_P0051508 Rnls protein_coding unknown_likely_coding MGP_BALBcJ_T0051509.1 MGP_BALBcJ_G0025020.1 mouse_genomes_project 19 30309660 30568673 - MGP_BALBcJ_P0051509 Rnls protein_coding protein_coding MGP_BALBcJ_T0051510.1 MGP_BALBcJ_G0025020.1 mouse_genomes_project 19 30309660 30568703 - MGP_BALBcJ_P0051510 Rnls protein_coding protein_coding MGP_BALBcJ_T0051534.1 MGP_BALBcJ_G0025033.1 mouse_genomes_project 19 31793135 31816049 + MGP_BALBcJ_P0051534 Ifit2 protein_coding protein_coding MGP_BALBcJ_T0051535.1 MGP_BALBcJ_G0025033.1 mouse_genomes_project 19 31793151 31819276 + MGP_BALBcJ_P0051535 Ifit2 protein_coding protein_coding MGP_BALBcJ_T0050997.1 MGP_BALBcJ_G0024802.1 mouse_genomes_project 19 6834466 6851368 - MGP_BALBcJ_P0050997 Best1 protein_coding protein_coding MGP_BALBcJ_T0050998.1 MGP_BALBcJ_G0024802.1 mouse_genomes_project 19 6839821 6842170 - Best1 protein_coding processed_transcript MGP_BALBcJ_T0003835.1 MGP_BALBcJ_G0003437.1 mouse_genomes_project 19 3396943 3398244 - Gm14964 antisense antisense MGP_BALBcJ_T0003836.1 MGP_BALBcJ_G0003437.1 mouse_genomes_project 19 3397021 3398021 - Gm14964 antisense antisense MGP_BALBcJ_T0051455.1 MGP_BALBcJ_G0025003.1 mouse_genomes_project 19 26818246 26912332 - MGP_BALBcJ_P0051455 9930021J03Rik protein_coding protein_coding MGP_BALBcJ_T0051456.1 MGP_BALBcJ_G0025003.1 mouse_genomes_project 19 26819157 26858109 - MGP_BALBcJ_P0051456 9930021J03Rik protein_coding protein_coding MGP_BALBcJ_T0051457.1 MGP_BALBcJ_G0025003.1 mouse_genomes_project 19 26819419 26912474 - MGP_BALBcJ_P0051457 9930021J03Rik protein_coding protein_coding MGP_BALBcJ_T0051458.1 MGP_BALBcJ_G0025003.1 mouse_genomes_project 19 26824566 26858171 - MGP_BALBcJ_P0051458 9930021J03Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050485.1 MGP_BALBcJ_G0024669.1 mouse_genomes_project 19 2219143 2223494 - MGP_BALBcJ_P0050485 Tsga10ip protein_coding protein_coding MGP_BALBcJ_T0003859.1 MGP_BALBcJ_G0003454.1 mouse_genomes_project 19 45016271 45019868 + Gm19557 antisense antisense MGP_BALBcJ_T0051136.1 MGP_BALBcJ_G0024850.1 mouse_genomes_project 19 8394395 8409043 + MGP_BALBcJ_P0051136 Ms4a6b protein_coding protein_coding MGP_BALBcJ_T0051137.1 MGP_BALBcJ_G0024850.1 mouse_genomes_project 19 8396479 8399649 + Ms4a6b protein_coding retained_intron MGP_BALBcJ_T0051138.1 MGP_BALBcJ_G0024850.1 mouse_genomes_project 19 8399464 8405210 + MGP_BALBcJ_P0051138 Ms4a6b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051014.1 MGP_BALBcJ_G0024808.1 mouse_genomes_project 19 7057527 7061341 + Tmem258 protein_coding processed_transcript MGP_BALBcJ_T0051015.1 MGP_BALBcJ_G0024808.1 mouse_genomes_project 19 7057527 7061341 + MGP_BALBcJ_P0051015 Tmem258 protein_coding protein_coding MGP_BALBcJ_T0051016.1 MGP_BALBcJ_G0024808.1 mouse_genomes_project 19 7057732 7061335 + Tmem258 protein_coding retained_intron MGP_BALBcJ_T0051017.1 MGP_BALBcJ_G0024808.1 mouse_genomes_project 19 7059547 7061341 + MGP_BALBcJ_P0051017 Tmem258 protein_coding protein_coding MGP_BALBcJ_T0013375.1 MGP_BALBcJ_G0011472.1 mouse_genomes_project 19 43677660 43678244 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050481.1 MGP_BALBcJ_G0024666.1 mouse_genomes_project 19 2193956 2195956 - MGP_BALBcJ_P0050481 Banf1 protein_coding protein_coding MGP_BALBcJ_T0050482.1 MGP_BALBcJ_G0024666.1 mouse_genomes_project 19 2193956 2195658 - MGP_BALBcJ_P0050482 Banf1 protein_coding protein_coding MGP_BALBcJ_T0051790.1 MGP_BALBcJ_G0025122.1 mouse_genomes_project 19 40839728 40896853 + MGP_BALBcJ_P0051790 Cnnm1 protein_coding protein_coding MGP_BALBcJ_T0051791.1 MGP_BALBcJ_G0025122.1 mouse_genomes_project 19 40839737 40896808 + MGP_BALBcJ_P0051791 Cnnm1 protein_coding unknown_likely_coding MGP_BALBcJ_T0050803.1 MGP_BALBcJ_G0024741.1 mouse_genomes_project 19 3825406 3841452 - MGP_BALBcJ_P0050803 Plcb3 protein_coding protein_coding MGP_BALBcJ_T0051061.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7732411 7743739 - MGP_BALBcJ_P0051061 Tmem109 protein_coding protein_coding MGP_BALBcJ_T0051062.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7733600 7742121 - MGP_BALBcJ_P0051062 Tmem109 protein_coding protein_coding MGP_BALBcJ_T0051063.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7733884 7736488 - Tmem109 protein_coding retained_intron MGP_BALBcJ_T0051064.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7733939 7743739 - MGP_BALBcJ_P0051064 Tmem109 protein_coding protein_coding MGP_BALBcJ_T0051065.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7735678 7743449 - Tmem109 protein_coding retained_intron MGP_BALBcJ_T0051066.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7735992 7743469 - MGP_BALBcJ_P0051066 Tmem109 protein_coding protein_coding MGP_BALBcJ_T0051067.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7736010 7743436 - MGP_BALBcJ_P0051067 Tmem109 protein_coding protein_coding MGP_BALBcJ_T0051068.1 MGP_BALBcJ_G0024828.1 mouse_genomes_project 19 7742252 7743436 - Tmem109 protein_coding processed_transcript MGP_BALBcJ_T0050592.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2898515 2905664 + MGP_BALBcJ_P0050592 Syvn1 protein_coding protein_coding MGP_BALBcJ_T0050593.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2898577 2901143 + MGP_BALBcJ_P0050593 Syvn1 protein_coding protein_coding MGP_BALBcJ_T0050594.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2898601 2905661 + MGP_BALBcJ_P0050594 Syvn1 protein_coding protein_coding MGP_BALBcJ_T0050595.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2899004 2905663 + Syvn1 protein_coding retained_intron MGP_BALBcJ_T0050596.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2899019 2905661 + MGP_BALBcJ_P0050596 Syvn1 protein_coding protein_coding MGP_BALBcJ_T0050597.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2899024 2901591 + Syvn1 protein_coding retained_intron MGP_BALBcJ_T0050598.1 MGP_BALBcJ_G0024703.1 mouse_genomes_project 19 2899043 2905661 + MGP_BALBcJ_P0050598 Syvn1 protein_coding protein_coding MGP_BALBcJ_T0099643.1 MGP_BALBcJ_G0037679.1 mouse_genomes_project 19 32059821 32059982 + Gm22082 snRNA snRNA MGP_BALBcJ_T0051454.1 MGP_BALBcJ_G0025002.1 mouse_genomes_project 19 26801902 26812293 + MGP_BALBcJ_P0051454 Mlana protein_coding protein_coding MGP_BALBcJ_T0051209.1 MGP_BALBcJ_G0024892.1 mouse_genomes_project 19 9732479 9733480 + MGP_BALBcJ_P0051209 Olfr1445 protein_coding protein_coding MGP_BALBcJ_T0051751.1 MGP_BALBcJ_G0025109.1 mouse_genomes_project 19 39464354 39478612 - MGP_BALBcJ_P0051751 Morn4 protein_coding protein_coding MGP_BALBcJ_T0100906.1 MGP_BALBcJ_G0038942.1 mouse_genomes_project 19 19237037 19237135 - Gm22506 snoRNA snoRNA MGP_BALBcJ_T0100904.1 MGP_BALBcJ_G0038940.1 mouse_genomes_project 19 16254220 16254352 + Gm25437 snoRNA snoRNA MGP_BALBcJ_T0050514.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2310709 2316381 - MGP_BALBcJ_P0050514 Mus81 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050515.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2311196 2316767 - MGP_BALBcJ_P0050515 Mus81 protein_coding protein_coding MGP_BALBcJ_T0050516.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2311204 2311938 - Mus81 protein_coding retained_intron MGP_BALBcJ_T0050517.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2311215 2316300 - Mus81 protein_coding retained_intron MGP_BALBcJ_T0050518.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2311217 2312328 - Mus81 protein_coding retained_intron MGP_BALBcJ_T0050519.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2311218 2312332 - Mus81 protein_coding retained_intron MGP_BALBcJ_T0050520.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2311222 2316650 - MGP_BALBcJ_P0050520 Mus81 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050521.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2312054 2313250 - Mus81 protein_coding retained_intron MGP_BALBcJ_T0050522.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2312576 2314175 - Mus81 protein_coding processed_transcript MGP_BALBcJ_T0050523.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2313852 2316631 - MGP_BALBcJ_P0050523 Mus81 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050524.1 MGP_BALBcJ_G0024677.1 mouse_genomes_project 19 2315832 2316676 - Mus81 protein_coding retained_intron MGP_BALBcJ_T0050817.1 MGP_BALBcJ_G0024750.1 mouse_genomes_project 19 3942714 4085366 + MGP_BALBcJ_P0050817 Macrod1 protein_coding protein_coding MGP_BALBcJ_T0051055.1 MGP_BALBcJ_G0024826.1 mouse_genomes_project 19 7701643 7705280 + Slc15a3 protein_coding processed_transcript MGP_BALBcJ_T0051056.1 MGP_BALBcJ_G0024826.1 mouse_genomes_project 19 7704460 7719794 + MGP_BALBcJ_P0051056 Slc15a3 protein_coding protein_coding MGP_BALBcJ_T0051057.1 MGP_BALBcJ_G0024826.1 mouse_genomes_project 19 7704466 7705404 + Slc15a3 protein_coding processed_transcript MGP_BALBcJ_T0051058.1 MGP_BALBcJ_G0024826.1 mouse_genomes_project 19 7704827 7721241 + Slc15a3 protein_coding retained_intron MGP_BALBcJ_T0051701.1 MGP_BALBcJ_G0025090.1 mouse_genomes_project 19 38434775 38449445 - MGP_BALBcJ_P0051701 Opalin protein_coding protein_coding MGP_BALBcJ_T0051178.1 MGP_BALBcJ_G0024876.1 mouse_genomes_project 19 9146897 9147984 - MGP_BALBcJ_P0051178 Olfr1436 protein_coding protein_coding MGP_BALBcJ_T0050359.1 MGP_BALBcJ_G0024621.1 mouse_genomes_project 19 984689 987955 + MGP_BALBcJ_P0050359 Ppp1ca protein_coding protein_coding MGP_BALBcJ_T0051635.1 MGP_BALBcJ_G0025069.1 mouse_genomes_project 19 36185631 36269348 + MGP_BALBcJ_P0051635 Tbc1d12 protein_coding protein_coding MGP_BALBcJ_T0051459.1 MGP_BALBcJ_G0025004.1 mouse_genomes_project 19 26914884 26919459 - MGP_BALBcJ_P0051459 Ranbp6 protein_coding protein_coding MGP_BALBcJ_T0050422.1 MGP_BALBcJ_G0024639.1 mouse_genomes_project 19 1596740 1607194 - MGP_BALBcJ_P0050422 protein_coding protein_coding MGP_BALBcJ_T0050426.1 MGP_BALBcJ_G0024639.1 mouse_genomes_project 19 1602515 1607176 - protein_coding retained_intron MGP_BALBcJ_T0051151.1 MGP_BALBcJ_G0024855.1 mouse_genomes_project 19 8528149 8542381 - MGP_BALBcJ_P0051151 Oosp2 protein_coding protein_coding MGP_BALBcJ_T0051152.1 MGP_BALBcJ_G0024855.1 mouse_genomes_project 19 8528150 8542424 - MGP_BALBcJ_P0051152 Oosp2 protein_coding protein_coding MGP_BALBcJ_T0010303.1 MGP_BALBcJ_G0008428.1 mouse_genomes_project 19 45436932 45437014 - Gm22240 miRNA miRNA MGP_BALBcJ_T0051600.1 MGP_BALBcJ_G0025055.1 mouse_genomes_project 19 34739613 34744532 + MGP_BALBcJ_P0051600 Hhex protein_coding protein_coding MGP_BALBcJ_T0010262.1 MGP_BALBcJ_G0008387.1 mouse_genomes_project 19 1429433 1429491 - Mir6986 miRNA miRNA MGP_BALBcJ_T0050876.1 MGP_BALBcJ_G0024766.1 mouse_genomes_project 19 4747970 4797225 - protein_coding processed_transcript MGP_BALBcJ_T0051610.1 MGP_BALBcJ_G0025061.1 mouse_genomes_project 19 35420794 35441120 + MGP_BALBcJ_P0051610 Ffar4 protein_coding protein_coding MGP_BALBcJ_T0051880.1 MGP_BALBcJ_G0025154.1 mouse_genomes_project 19 42497958 42507191 + MGP_BALBcJ_P0051880 Sfxn3 protein_coding protein_coding MGP_BALBcJ_T0051881.1 MGP_BALBcJ_G0025154.1 mouse_genomes_project 19 42497958 42507191 + MGP_BALBcJ_P0051881 Sfxn3 protein_coding protein_coding MGP_BALBcJ_T0051882.1 MGP_BALBcJ_G0025154.1 mouse_genomes_project 19 42497958 42507191 + MGP_BALBcJ_P0051882 Sfxn3 protein_coding protein_coding MGP_BALBcJ_T0050535.1 MGP_BALBcJ_G0024684.1 mouse_genomes_project 19 2434429 2441503 - MGP_BALBcJ_P0050535 Kat5 protein_coding protein_coding MGP_BALBcJ_T0051240.1 MGP_BALBcJ_G0024923.1 mouse_genomes_project 19 10701857 10702802 - MGP_BALBcJ_P0051240 Olfr1497 protein_coding protein_coding MGP_BALBcJ_T0007083.1 MGP_BALBcJ_G0005811.1 mouse_genomes_project 19 43810947 43814201 + Gm26792 lincRNA lincRNA MGP_BALBcJ_T0050958.1 MGP_BALBcJ_G0024785.1 mouse_genomes_project 19 5938952 5939870 - MGP_BALBcJ_P0050958 Uqcc3 protein_coding protein_coding MGP_BALBcJ_T0050330.1 MGP_BALBcJ_G0024613.1 mouse_genomes_project 19 904568 915886 - MGP_BALBcJ_P0050330 Aip protein_coding protein_coding MGP_BALBcJ_T0050331.1 MGP_BALBcJ_G0024613.1 mouse_genomes_project 19 904586 911691 - MGP_BALBcJ_P0050331 Aip protein_coding protein_coding MGP_BALBcJ_T0050332.1 MGP_BALBcJ_G0024613.1 mouse_genomes_project 19 905569 915876 - MGP_BALBcJ_P0050332 Aip protein_coding protein_coding MGP_BALBcJ_T0050333.1 MGP_BALBcJ_G0024613.1 mouse_genomes_project 19 908378 914680 - Aip protein_coding processed_transcript MGP_BALBcJ_T0050334.1 MGP_BALBcJ_G0024613.1 mouse_genomes_project 19 911048 915818 - Aip protein_coding retained_intron MGP_BALBcJ_T0011463.1 MGP_BALBcJ_G0009588.1 mouse_genomes_project 19 39119682 39119921 + Gm22601 misc_RNA misc_RNA MGP_BALBcJ_T0013355.1 MGP_BALBcJ_G0011452.1 mouse_genomes_project 19 6397142 6398570 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013363.1 MGP_BALBcJ_G0011460.1 mouse_genomes_project 19 20683804 20684769 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050385.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1109227 1193656 - MGP_BALBcJ_P0050385 Kdm2a protein_coding protein_coding MGP_BALBcJ_T0050386.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1110977 1192428 - MGP_BALBcJ_P0050386 Kdm2a protein_coding protein_coding MGP_BALBcJ_T0050387.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1114060 1117451 - MGP_BALBcJ_P0050387 Kdm2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050388.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1114983 1117706 - Kdm2a protein_coding retained_intron MGP_BALBcJ_T0050389.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1119808 1129556 - MGP_BALBcJ_P0050389 Kdm2a protein_coding protein_coding MGP_BALBcJ_T0050390.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1124092 1129474 - MGP_BALBcJ_P0050390 Kdm2a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050391.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1137179 1192431 - MGP_BALBcJ_P0050391 Kdm2a protein_coding protein_coding MGP_BALBcJ_T0050392.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1143773 1192427 - Kdm2a protein_coding retained_intron MGP_BALBcJ_T0050393.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1145763 1158484 - MGP_BALBcJ_P0050393 Kdm2a protein_coding protein_coding MGP_BALBcJ_T0050394.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1146177 1192419 - Kdm2a protein_coding retained_intron MGP_BALBcJ_T0050395.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1184284 1192428 - MGP_BALBcJ_P0050395 Kdm2a protein_coding protein_coding MGP_BALBcJ_T0050396.1 MGP_BALBcJ_G0024628.1 mouse_genomes_project 19 1187800 1192446 - Kdm2a protein_coding retained_intron MGP_BALBcJ_T0051805.1 MGP_BALBcJ_G0025128.1 mouse_genomes_project 19 41164451 41180248 + MGP_BALBcJ_P0051805 Cutc protein_coding protein_coding MGP_BALBcJ_T0051806.1 MGP_BALBcJ_G0025128.1 mouse_genomes_project 19 41164553 41180255 + MGP_BALBcJ_P0051806 Cutc protein_coding protein_coding MGP_BALBcJ_T0051807.1 MGP_BALBcJ_G0025128.1 mouse_genomes_project 19 41164592 41179855 + MGP_BALBcJ_P0051807 Cutc protein_coding protein_coding MGP_BALBcJ_T0051808.1 MGP_BALBcJ_G0025128.1 mouse_genomes_project 19 41176480 41180255 + Cutc protein_coding retained_intron MGP_BALBcJ_T0050937.1 MGP_BALBcJ_G0024777.1 mouse_genomes_project 19 5850022 5855237 - MGP_BALBcJ_P0050937 Polr2g protein_coding protein_coding MGP_BALBcJ_T0051180.1 MGP_BALBcJ_G0024878.1 mouse_genomes_project 19 9261551 9262639 + MGP_BALBcJ_P0051180 Olfr1441 protein_coding protein_coding MGP_BALBcJ_T0051086.1 MGP_BALBcJ_G0024834.1 mouse_genomes_project 19 7838706 7853650 - MGP_BALBcJ_P0051086 Ms4a15 protein_coding protein_coding MGP_BALBcJ_T0051087.1 MGP_BALBcJ_G0024834.1 mouse_genomes_project 19 7843572 7853581 - MGP_BALBcJ_P0051087 Ms4a15 protein_coding protein_coding MGP_BALBcJ_T0051088.1 MGP_BALBcJ_G0024834.1 mouse_genomes_project 19 7843658 7853630 - MGP_BALBcJ_P0051088 Ms4a15 protein_coding protein_coding MGP_BALBcJ_T0051577.1 MGP_BALBcJ_G0025049.1 mouse_genomes_project 19 34199124 34201189 - MGP_BALBcJ_P0051577 Fgfbp3 protein_coding protein_coding MGP_BALBcJ_T0051542.1 MGP_BALBcJ_G0025038.1 mouse_genomes_project 19 31900394 31909985 + MGP_BALBcJ_P0051542 Ifit1 protein_coding protein_coding MGP_BALBcJ_T0051967.1 MGP_BALBcJ_G0025175.1 mouse_genomes_project 19 43787727 43793493 - MGP_BALBcJ_P0051967 Psd protein_coding unknown_likely_coding MGP_BALBcJ_T0051968.1 MGP_BALBcJ_G0025175.1 mouse_genomes_project 19 43787734 43802795 - MGP_BALBcJ_P0051968 Psd protein_coding protein_coding MGP_BALBcJ_T0051969.1 MGP_BALBcJ_G0025175.1 mouse_genomes_project 19 43787734 43802795 - MGP_BALBcJ_P0051969 Psd protein_coding protein_coding MGP_BALBcJ_T0050665.1 MGP_BALBcJ_G0024720.1 mouse_genomes_project 19 3088012 3089401 + MGP_BALBcJ_P0050665 Gpha2 protein_coding protein_coding MGP_BALBcJ_T0050666.1 MGP_BALBcJ_G0024720.1 mouse_genomes_project 19 3088020 3089401 + MGP_BALBcJ_P0050666 Gpha2 protein_coding protein_coding MGP_BALBcJ_T0051669.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37915387 37954288 - MGP_BALBcJ_P0051669 Aldh18a1 protein_coding protein_coding MGP_BALBcJ_T0051670.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37915387 37954194 - MGP_BALBcJ_P0051670 Aldh18a1 protein_coding protein_coding MGP_BALBcJ_T0051671.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37916281 37919996 - Aldh18a1 protein_coding retained_intron MGP_BALBcJ_T0051672.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37918557 37919874 - MGP_BALBcJ_P0051672 Aldh18a1 protein_coding protein_coding MGP_BALBcJ_T0051673.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37922203 37954248 - Aldh18a1 protein_coding retained_intron MGP_BALBcJ_T0051674.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37939552 37954209 - MGP_BALBcJ_P0051674 Aldh18a1 protein_coding protein_coding MGP_BALBcJ_T0051675.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37942823 37954235 - MGP_BALBcJ_P0051675 Aldh18a1 protein_coding protein_coding MGP_BALBcJ_T0051676.1 MGP_BALBcJ_G0025083.1 mouse_genomes_project 19 37942866 37954207 - MGP_BALBcJ_P0051676 Aldh18a1 protein_coding protein_coding MGP_BALBcJ_T0051027.1 MGP_BALBcJ_G0024811.1 mouse_genomes_project 19 7243101 7307168 + MGP_BALBcJ_P0051027 Syt7 protein_coding protein_coding MGP_BALBcJ_T0051028.1 MGP_BALBcJ_G0024811.1 mouse_genomes_project 19 7243101 7307168 + MGP_BALBcJ_P0051028 Syt7 protein_coding protein_coding MGP_BALBcJ_T0051029.1 MGP_BALBcJ_G0024811.1 mouse_genomes_project 19 7243101 7307168 + MGP_BALBcJ_P0051029 Syt7 protein_coding protein_coding MGP_BALBcJ_T0051030.1 MGP_BALBcJ_G0024811.1 mouse_genomes_project 19 7243492 7276988 + MGP_BALBcJ_P0051030 Syt7 protein_coding unknown_likely_coding MGP_BALBcJ_T0011453.1 MGP_BALBcJ_G0009578.1 mouse_genomes_project 19 5734910 5735239 - Gm22820 misc_RNA misc_RNA MGP_BALBcJ_T0050782.1 MGP_BALBcJ_G0024735.1 mouse_genomes_project 19 3780124 3781850 + MGP_BALBcJ_P0050782 Trmt112 protein_coding protein_coding MGP_BALBcJ_T0050783.1 MGP_BALBcJ_G0024735.1 mouse_genomes_project 19 3780173 3781829 + MGP_BALBcJ_P0050783 Trmt112 protein_coding protein_coding MGP_BALBcJ_T0050784.1 MGP_BALBcJ_G0024735.1 mouse_genomes_project 19 3780579 3781635 + Trmt112 protein_coding retained_intron MGP_BALBcJ_T0050785.1 MGP_BALBcJ_G0024735.1 mouse_genomes_project 19 3780590 3781829 + MGP_BALBcJ_P0050785 Trmt112 protein_coding protein_coding MGP_BALBcJ_T0013365.1 MGP_BALBcJ_G0011462.1 mouse_genomes_project 19 22856917 22857868 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050454.1 MGP_BALBcJ_G0024652.1 mouse_genomes_project 19 1853808 1856125 + MGP_BALBcJ_P0050454 B4gat1 protein_coding protein_coding MGP_BALBcJ_T0013380.1 MGP_BALBcJ_G0011477.1 mouse_genomes_project 19 58505091 58505459 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051626.1 MGP_BALBcJ_G0025066.1 mouse_genomes_project 19 35724508 35734825 + MGP_BALBcJ_P0051626 Slc35g1 protein_coding protein_coding MGP_BALBcJ_T0051214.1 MGP_BALBcJ_G0024897.1 mouse_genomes_project 19 9799609 9800587 + MGP_BALBcJ_P0051214 Olfr1450 protein_coding protein_coding MGP_BALBcJ_T0052102.1 MGP_BALBcJ_G0025229.1 mouse_genomes_project 19 52909103 52926830 - MGP_BALBcJ_P0052102 Zdhhc6 protein_coding protein_coding MGP_BALBcJ_T0050599.1 MGP_BALBcJ_G0024704.1 mouse_genomes_project 19 2905581 2909735 - MGP_BALBcJ_P0050599 Mrpl49 protein_coding protein_coding MGP_BALBcJ_T0052005.1 MGP_BALBcJ_G0025191.1 mouse_genomes_project 19 44516274 44533683 - MGP_BALBcJ_P0052005 Pcgf6 protein_coding protein_coding MGP_BALBcJ_T0051985.1 MGP_BALBcJ_G0025182.1 mouse_genomes_project 19 44007852 44050665 - MGP_BALBcJ_P0051985 Arl3 protein_coding protein_coding MGP_BALBcJ_T0051024.1 MGP_BALBcJ_G0024810.1 mouse_genomes_project 19 7098790 7158211 - MGP_BALBcJ_P0051024 Dagla protein_coding protein_coding MGP_BALBcJ_T0051025.1 MGP_BALBcJ_G0024810.1 mouse_genomes_project 19 7098793 7158191 - MGP_BALBcJ_P0051025 Dagla protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051026.1 MGP_BALBcJ_G0024810.1 mouse_genomes_project 19 7106855 7110683 - Dagla protein_coding processed_transcript MGP_BALBcJ_T0051984.1 MGP_BALBcJ_G0025181.1 mouse_genomes_project 19 43978477 43993141 + MGP_BALBcJ_P0051984 Trim8 protein_coding protein_coding MGP_BALBcJ_T0051789.1 MGP_BALBcJ_G0025121.1 mouse_genomes_project 19 40187577 40787068 - MGP_BALBcJ_P0051789 Hpse2 protein_coding protein_coding MGP_BALBcJ_T0010276.1 MGP_BALBcJ_G0008401.1 mouse_genomes_project 19 6697768 6697872 + Gm22369 miRNA miRNA MGP_BALBcJ_T0100892.1 MGP_BALBcJ_G0038928.1 mouse_genomes_project 19 5778467 5778539 + Gm25855 snoRNA snoRNA MGP_BALBcJ_T0052210.1 MGP_BALBcJ_G0025253.1 mouse_genomes_project 19 56450238 56515916 - MGP_BALBcJ_P0052210 Hspa12a protein_coding protein_coding MGP_BALBcJ_T0051792.1 MGP_BALBcJ_G0025123.1 mouse_genomes_project 19 40899392 40926899 - MGP_BALBcJ_P0051792 Got1 protein_coding protein_coding MGP_BALBcJ_T0051793.1 MGP_BALBcJ_G0025123.1 mouse_genomes_project 19 40899661 40915751 - MGP_BALBcJ_P0051793 Got1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051794.1 MGP_BALBcJ_G0025123.1 mouse_genomes_project 19 40899957 40904609 - Got1 protein_coding retained_intron MGP_BALBcJ_T0051795.1 MGP_BALBcJ_G0025123.1 mouse_genomes_project 19 40911975 40926779 - Got1 protein_coding processed_transcript MGP_BALBcJ_T0051477.1 MGP_BALBcJ_G0025010.1 mouse_genomes_project 19 27675622 27679424 - MGP_BALBcJ_P0051477 Dkk1 protein_coding protein_coding MGP_BALBcJ_T0052056.1 MGP_BALBcJ_G0025211.1 mouse_genomes_project 19 47690713 48220653 - MGP_BALBcJ_P0052056 protein_coding protein_coding MGP_BALBcJ_T0052057.1 MGP_BALBcJ_G0025211.1 mouse_genomes_project 19 47695072 48220653 - MGP_BALBcJ_P0052057 protein_coding protein_coding MGP_BALBcJ_T0052058.1 MGP_BALBcJ_G0025211.1 mouse_genomes_project 19 47698410 47801310 - MGP_BALBcJ_P0052058 protein_coding protein_coding MGP_BALBcJ_T0052059.1 MGP_BALBcJ_G0025211.1 mouse_genomes_project 19 47700104 48220492 - MGP_BALBcJ_P0052059 protein_coding protein_coding MGP_BALBcJ_T0051692.1 MGP_BALBcJ_G0025086.1 mouse_genomes_project 19 38199414 38216808 + MGP_BALBcJ_P0051692 Ccnj protein_coding protein_coding MGP_BALBcJ_T0051693.1 MGP_BALBcJ_G0025086.1 mouse_genomes_project 19 38199414 38216808 + MGP_BALBcJ_P0051693 Ccnj protein_coding protein_coding MGP_BALBcJ_T0051694.1 MGP_BALBcJ_G0025086.1 mouse_genomes_project 19 38199443 38216245 + MGP_BALBcJ_P0051694 Ccnj protein_coding protein_coding MGP_BALBcJ_T0052052.1 MGP_BALBcJ_G0025208.1 mouse_genomes_project 19 45456398 45553310 + MGP_BALBcJ_P0052052 Cfap58 protein_coding protein_coding MGP_BALBcJ_T0052053.1 MGP_BALBcJ_G0025208.1 mouse_genomes_project 19 45540667 45552703 + MGP_BALBcJ_P0052053 Cfap58 protein_coding unknown_likely_coding MGP_BALBcJ_T0050335.1 MGP_BALBcJ_G0024614.1 mouse_genomes_project 19 925512 930135 - MGP_BALBcJ_P0050335 Cabp4 protein_coding protein_coding MGP_BALBcJ_T0052009.1 MGP_BALBcJ_G0025195.1 mouse_genomes_project 19 44598587 44631795 - MGP_BALBcJ_P0052009 Calhm2 protein_coding protein_coding MGP_BALBcJ_T0052010.1 MGP_BALBcJ_G0025195.1 mouse_genomes_project 19 44625328 44631795 - MGP_BALBcJ_P0052010 Calhm2 protein_coding protein_coding MGP_BALBcJ_T0099649.1 MGP_BALBcJ_G0037685.1 mouse_genomes_project 19 42393055 42393162 + Gm25482 snRNA snRNA MGP_BALBcJ_T0010301.1 MGP_BALBcJ_G0008426.1 mouse_genomes_project 19 44773166 44773237 - Mir6995 miRNA miRNA MGP_BALBcJ_T0050880.1 MGP_BALBcJ_G0024769.1 mouse_genomes_project 19 5669846 5680145 + MGP_BALBcJ_P0050880 Slc22a6 protein_coding protein_coding MGP_BALBcJ_T0007095.1 MGP_BALBcJ_G0005820.1 mouse_genomes_project 19 57547295 57552117 - Gm17203 lincRNA lincRNA MGP_BALBcJ_T0050265.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680629 688772 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0050266.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680629 690928 - MGP_BALBcJ_P0050266 Tcirg1 protein_coding protein_coding MGP_BALBcJ_T0050267.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680629 692831 - MGP_BALBcJ_P0050267 Tcirg1 protein_coding protein_coding MGP_BALBcJ_T0050268.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680629 692689 - MGP_BALBcJ_P0050268 Tcirg1 protein_coding protein_coding MGP_BALBcJ_T0050269.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680629 692810 - MGP_BALBcJ_P0050269 Tcirg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050270.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680849 687723 - MGP_BALBcJ_P0050270 Tcirg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050271.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 680979 681810 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0050272.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 681650 682411 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0050273.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 682786 683433 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0050274.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 683315 689055 - MGP_BALBcJ_P0050274 Tcirg1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050275.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 687942 688946 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0050276.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 688193 692738 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0050277.1 MGP_BALBcJ_G0024596.1 mouse_genomes_project 19 688393 690121 - Tcirg1 protein_coding retained_intron MGP_BALBcJ_T0051265.1 MGP_BALBcJ_G0024938.1 mouse_genomes_project 19 13930897 14203998 + MGP_BALBcJ_P0051265 Prune2 protein_coding protein_coding MGP_BALBcJ_T0051266.1 MGP_BALBcJ_G0024938.1 mouse_genomes_project 19 14115075 14204007 + MGP_BALBcJ_P0051266 Prune2 protein_coding unknown_likely_coding MGP_BALBcJ_T0100903.1 MGP_BALBcJ_G0038939.1 mouse_genomes_project 19 10534214 10534346 - Gm24124 snoRNA snoRNA MGP_BALBcJ_T0003826.1 MGP_BALBcJ_G0003433.1 mouse_genomes_project 19 2235366 2246090 + 4930481A15Rik antisense antisense MGP_BALBcJ_T0003827.1 MGP_BALBcJ_G0003433.1 mouse_genomes_project 19 2235366 2246186 + 4930481A15Rik antisense antisense MGP_BALBcJ_T0003828.1 MGP_BALBcJ_G0003433.1 mouse_genomes_project 19 2235366 2246083 + 4930481A15Rik antisense antisense MGP_BALBcJ_T0003829.1 MGP_BALBcJ_G0003433.1 mouse_genomes_project 19 2235414 2251339 + 4930481A15Rik antisense antisense MGP_BALBcJ_T0013366.1 MGP_BALBcJ_G0011463.1 mouse_genomes_project 19 24927376 24927816 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013379.1 MGP_BALBcJ_G0011476.1 mouse_genomes_project 19 54382611 54382959 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051172.1 MGP_BALBcJ_G0024870.1 mouse_genomes_project 19 9013868 9014813 - MGP_BALBcJ_P0051172 Olfr1428 protein_coding protein_coding MGP_BALBcJ_T0051258.1 MGP_BALBcJ_G0024934.1 mouse_genomes_project 19 13090704 13347423 + MGP_BALBcJ_P0051258 Gnaq protein_coding protein_coding MGP_BALBcJ_T0051259.1 MGP_BALBcJ_G0024934.1 mouse_genomes_project 19 13091169 13279179 + Gnaq protein_coding retained_intron MGP_BALBcJ_T0051260.1 MGP_BALBcJ_G0024934.1 mouse_genomes_project 19 13181248 13279926 + Gnaq protein_coding processed_transcript MGP_BALBcJ_T0007042.1 MGP_BALBcJ_G0005781.1 mouse_genomes_project 19 7243141 7245741 - Gm26859 lincRNA lincRNA MGP_BALBcJ_T0050431.1 MGP_BALBcJ_G0024641.1 mouse_genomes_project 19 1637709 1651612 - MGP_BALBcJ_P0050431 Ccs protein_coding protein_coding MGP_BALBcJ_T0100894.1 MGP_BALBcJ_G0038930.1 mouse_genomes_project 19 5779005 5779077 + Gm24452 snoRNA snoRNA MGP_BALBcJ_T0051184.1 MGP_BALBcJ_G0024882.1 mouse_genomes_project 19 9405971 9424160 + MGP_BALBcJ_P0051184 Fam111a protein_coding protein_coding MGP_BALBcJ_T0051185.1 MGP_BALBcJ_G0024882.1 mouse_genomes_project 19 9405971 9424168 + MGP_BALBcJ_P0051185 Fam111a protein_coding protein_coding MGP_BALBcJ_T0051186.1 MGP_BALBcJ_G0024882.1 mouse_genomes_project 19 9411322 9424162 + MGP_BALBcJ_P0051186 Fam111a protein_coding protein_coding MGP_BALBcJ_T0052038.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45244095 45349757 - MGP_BALBcJ_P0052038 Cfap43 protein_coding protein_coding MGP_BALBcJ_T0052039.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45244140 45270854 - Cfap43 protein_coding processed_transcript MGP_BALBcJ_T0052040.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45244140 45270854 - Cfap43 protein_coding processed_transcript MGP_BALBcJ_T0052041.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45261175 45270862 - Cfap43 protein_coding processed_transcript MGP_BALBcJ_T0052042.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45295061 45437028 - Cfap43 protein_coding retained_intron MGP_BALBcJ_T0052043.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45303698 45325417 - Cfap43 protein_coding processed_transcript MGP_BALBcJ_T0052044.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45335772 45349736 - Cfap43 protein_coding retained_intron MGP_BALBcJ_T0052051.1 MGP_BALBcJ_G0025205.1 mouse_genomes_project 19 45411306 45437040 - MGP_BALBcJ_P0052051 Cfap43 protein_coding protein_coding MGP_BALBcJ_T0051720.1 MGP_BALBcJ_G0025100.1 mouse_genomes_project 19 39240482 39273947 - MGP_BALBcJ_P0051720 Rrp12 protein_coding protein_coding MGP_BALBcJ_T0010302.1 MGP_BALBcJ_G0008427.1 mouse_genomes_project 19 45263629 45263765 - Mir8090 miRNA miRNA MGP_BALBcJ_T0010306.1 MGP_BALBcJ_G0008431.1 mouse_genomes_project 19 50577259 50577360 - Mir6407 miRNA miRNA MGP_BALBcJ_T0007063.1 MGP_BALBcJ_G0005796.1 mouse_genomes_project 19 30590334 30604498 - Gm7237 lincRNA lincRNA MGP_BALBcJ_T0050633.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2933992 2938169 - MGP_BALBcJ_P0050633 Zfpl1 protein_coding protein_coding MGP_BALBcJ_T0050634.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2933995 2936057 - Zfpl1 protein_coding retained_intron MGP_BALBcJ_T0050635.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2934398 2938141 - MGP_BALBcJ_P0050635 Zfpl1 protein_coding protein_coding MGP_BALBcJ_T0050636.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2935090 2937919 - MGP_BALBcJ_P0050636 Zfpl1 protein_coding protein_coding MGP_BALBcJ_T0050637.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2935420 2938120 - Zfpl1 protein_coding retained_intron MGP_BALBcJ_T0050638.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2935440 2938130 - MGP_BALBcJ_P0050638 Zfpl1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050639.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2935481 2937533 - Zfpl1 protein_coding retained_intron MGP_BALBcJ_T0050640.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2935486 2938170 - MGP_BALBcJ_P0050640 Zfpl1 protein_coding protein_coding MGP_BALBcJ_T0050641.1 MGP_BALBcJ_G0024712.1 mouse_genomes_project 19 2935831 2938153 - MGP_BALBcJ_P0050641 Zfpl1 protein_coding protein_coding MGP_BALBcJ_T0010279.1 MGP_BALBcJ_G0008404.1 mouse_genomes_project 19 10497621 10497730 - Gm22323 miRNA miRNA MGP_BALBcJ_T0050973.1 MGP_BALBcJ_G0024790.1 mouse_genomes_project 19 5981101 5989303 + MGP_BALBcJ_P0050973 B3gat3 protein_coding protein_coding MGP_BALBcJ_T0052045.1 MGP_BALBcJ_G0025206.1 mouse_genomes_project 19 45369989 45380734 + MGP_BALBcJ_P0052045 Gsto1 protein_coding protein_coding MGP_BALBcJ_T0052046.1 MGP_BALBcJ_G0025206.1 mouse_genomes_project 19 45370102 45370745 + Gsto1 protein_coding retained_intron MGP_BALBcJ_T0052047.1 MGP_BALBcJ_G0025206.1 mouse_genomes_project 19 45378938 45380511 + Gsto1 protein_coding retained_intron MGP_BALBcJ_T0050824.1 MGP_BALBcJ_G0024753.1 mouse_genomes_project 19 4102429 4104889 - MGP_BALBcJ_P0050824 Cox8a protein_coding protein_coding MGP_BALBcJ_T0100893.1 MGP_BALBcJ_G0038929.1 mouse_genomes_project 19 5778725 5778800 + Gm25894 snoRNA snoRNA MGP_BALBcJ_T0051627.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 35815344 35863437 + Plce1 protein_coding processed_transcript MGP_BALBcJ_T0051628.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 35815356 36131020 + MGP_BALBcJ_P0051628 Plce1 protein_coding protein_coding MGP_BALBcJ_T0051629.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 35863567 36132650 + MGP_BALBcJ_P0051629 Plce1 protein_coding protein_coding MGP_BALBcJ_T0051630.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 35863579 36130385 + MGP_BALBcJ_P0051630 Plce1 protein_coding protein_coding MGP_BALBcJ_T0051631.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 35925477 35994911 + MGP_BALBcJ_P0051631 Plce1 protein_coding protein_coding MGP_BALBcJ_T0051632.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 36068942 36131178 + Plce1 protein_coding retained_intron MGP_BALBcJ_T0051633.1 MGP_BALBcJ_G0025067.1 mouse_genomes_project 19 36081869 36098115 + Plce1 protein_coding retained_intron MGP_BALBcJ_T0050405.1 MGP_BALBcJ_G0024632.1 mouse_genomes_project 19 1314810 1416302 + MGP_BALBcJ_P0050405 Pcx protein_coding unknown_likely_coding MGP_BALBcJ_T0050406.1 MGP_BALBcJ_G0024632.1 mouse_genomes_project 19 1314923 1427288 + MGP_BALBcJ_P0050406 Pcx protein_coding protein_coding MGP_BALBcJ_T0050407.1 MGP_BALBcJ_G0024632.1 mouse_genomes_project 19 1399942 1427288 + MGP_BALBcJ_P0050407 Pcx protein_coding protein_coding MGP_BALBcJ_T0051043.1 MGP_BALBcJ_G0024819.1 mouse_genomes_project 19 7445994 7458052 - MGP_BALBcJ_P0051043 Tkfc protein_coding protein_coding MGP_BALBcJ_T0052207.1 MGP_BALBcJ_G0025251.1 mouse_genomes_project 19 56414158 56432143 + MGP_BALBcJ_P0052207 Pnliprp2 protein_coding protein_coding MGP_BALBcJ_T0050307.1 MGP_BALBcJ_G0024608.1 mouse_genomes_project 19 829726 831232 - MGP_BALBcJ_P0050307 Gstp2 protein_coding protein_coding MGP_BALBcJ_T0051851.1 MGP_BALBcJ_G0025144.1 mouse_genomes_project 19 41984409 41993548 - MGP_BALBcJ_P0051851 Gm20538 protein_coding protein_coding MGP_BALBcJ_T0007082.1 MGP_BALBcJ_G0005810.1 mouse_genomes_project 19 43463070 43478466 + 4930505N22Rik lincRNA lincRNA MGP_BALBcJ_T0052004.1 MGP_BALBcJ_G0025190.1 mouse_genomes_project 19 44497284 44508159 + MGP_BALBcJ_P0052004 Ina protein_coding protein_coding MGP_BALBcJ_T0050456.1 MGP_BALBcJ_G0024654.1 mouse_genomes_project 19 1865789 1872051 + MGP_BALBcJ_P0050456 Rin1 protein_coding protein_coding MGP_BALBcJ_T0050457.1 MGP_BALBcJ_G0024654.1 mouse_genomes_project 19 1865840 1872060 + MGP_BALBcJ_P0050457 Rin1 protein_coding unknown_likely_coding MGP_BALBcJ_T0010273.1 MGP_BALBcJ_G0008398.1 mouse_genomes_project 19 5285507 5285615 - Gm26377 miRNA miRNA MGP_BALBcJ_T0051300.1 MGP_BALBcJ_G0024950.1 mouse_genomes_project 19 17685355 17721758 - MGP_BALBcJ_P0051300 Aldh1a7 protein_coding protein_coding MGP_BALBcJ_T0051246.1 MGP_BALBcJ_G0024929.1 mouse_genomes_project 19 10860093 10862017 + MGP_BALBcJ_P0051246 protein_coding protein_coding MGP_BALBcJ_T0051529.1 MGP_BALBcJ_G0025030.1 mouse_genomes_project 19 31536946 31573182 + MGP_BALBcJ_P0051529 Fas protein_coding protein_coding MGP_BALBcJ_T0051530.1 MGP_BALBcJ_G0025030.1 mouse_genomes_project 19 31536946 31556040 + MGP_BALBcJ_P0051530 Fas protein_coding protein_coding MGP_BALBcJ_T0051210.1 MGP_BALBcJ_G0024893.1 mouse_genomes_project 19 9739511 9740555 - MGP_BALBcJ_P0051210 Olfr1446 protein_coding protein_coding MGP_BALBcJ_T0007032.1 MGP_BALBcJ_G0005777.1 mouse_genomes_project 19 2630655 2637638 - Malat1 lincRNA lincRNA MGP_BALBcJ_T0007033.1 MGP_BALBcJ_G0005777.1 mouse_genomes_project 19 2630656 2632430 - Malat1 lincRNA lincRNA MGP_BALBcJ_T0007034.1 MGP_BALBcJ_G0005777.1 mouse_genomes_project 19 2630659 2631918 - Malat1 lincRNA lincRNA MGP_BALBcJ_T0007035.1 MGP_BALBcJ_G0005777.1 mouse_genomes_project 19 2636881 2637637 - Malat1 lincRNA lincRNA MGP_BALBcJ_T0007036.1 MGP_BALBcJ_G0005777.1 mouse_genomes_project 19 2636908 2637606 - Malat1 lincRNA lincRNA MGP_BALBcJ_T0010275.1 MGP_BALBcJ_G0008400.1 mouse_genomes_project 19 5947611 5947687 - Mir5136 miRNA miRNA MGP_BALBcJ_T0003851.1 MGP_BALBcJ_G0003448.1 mouse_genomes_project 19 36095756 36099633 - Gm28991 antisense antisense MGP_BALBcJ_T0098566.1 MGP_BALBcJ_G0036620.1 mouse_genomes_project 19 48360886 48360923 + Gm25659 rRNA rRNA MGP_BALBcJ_T0052016.1 MGP_BALBcJ_G0025200.1 mouse_genomes_project 19 44759822 44967352 - MGP_BALBcJ_P0052016 Sh3pxd2a protein_coding protein_coding MGP_BALBcJ_T0052017.1 MGP_BALBcJ_G0025200.1 mouse_genomes_project 19 44759822 44967352 - MGP_BALBcJ_P0052017 Sh3pxd2a protein_coding protein_coding MGP_BALBcJ_T0051708.1 MGP_BALBcJ_G0025095.1 mouse_genomes_project 19 38955179 38959346 + MGP_BALBcJ_P0051708 Gm340 protein_coding protein_coding MGP_BALBcJ_T0050976.1 MGP_BALBcJ_G0024793.1 mouse_genomes_project 19 6004535 6014576 + MGP_BALBcJ_P0050976 Mta2 protein_coding protein_coding MGP_BALBcJ_T0050977.1 MGP_BALBcJ_G0024793.1 mouse_genomes_project 19 6005153 6008539 + Mta2 protein_coding processed_transcript MGP_BALBcJ_T0050978.1 MGP_BALBcJ_G0024793.1 mouse_genomes_project 19 6005166 6009413 + Mta2 protein_coding processed_transcript MGP_BALBcJ_T0050979.1 MGP_BALBcJ_G0024793.1 mouse_genomes_project 19 6006701 6009814 + Mta2 protein_coding retained_intron MGP_BALBcJ_T0050980.1 MGP_BALBcJ_G0024793.1 mouse_genomes_project 19 6007760 6009434 + Mta2 protein_coding processed_transcript MGP_BALBcJ_T0050981.1 MGP_BALBcJ_G0024793.1 mouse_genomes_project 19 6009085 6010376 + Mta2 protein_coding retained_intron MGP_BALBcJ_T0051111.1 MGP_BALBcJ_G0024844.1 mouse_genomes_project 19 8175960 8189924 - MGP_BALBcJ_P0051111 Ms4a7 protein_coding protein_coding MGP_BALBcJ_T0051112.1 MGP_BALBcJ_G0024844.1 mouse_genomes_project 19 8175960 8191373 - MGP_BALBcJ_P0051112 Ms4a7 protein_coding protein_coding MGP_BALBcJ_T0051113.1 MGP_BALBcJ_G0024844.1 mouse_genomes_project 19 8176327 8191345 - MGP_BALBcJ_P0051113 Ms4a7 protein_coding protein_coding MGP_BALBcJ_T0051114.1 MGP_BALBcJ_G0024844.1 mouse_genomes_project 19 8176330 8179914 - MGP_BALBcJ_P0051114 Ms4a7 protein_coding protein_coding MGP_BALBcJ_T0051115.1 MGP_BALBcJ_G0024844.1 mouse_genomes_project 19 8176426 8191375 - Ms4a7 protein_coding retained_intron MGP_BALBcJ_T0013369.1 MGP_BALBcJ_G0011466.1 mouse_genomes_project 19 25901930 25902727 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050229.1 MGP_BALBcJ_G0024592.1 mouse_genomes_project 19 339502 445911 - MGP_BALBcJ_P0050229 Lrp5 protein_coding protein_coding MGP_BALBcJ_T0050230.1 MGP_BALBcJ_G0024592.1 mouse_genomes_project 19 339505 445916 - MGP_BALBcJ_P0050230 Lrp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050231.1 MGP_BALBcJ_G0024592.1 mouse_genomes_project 19 339510 371767 - MGP_BALBcJ_P0050231 Lrp5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050232.1 MGP_BALBcJ_G0024592.1 mouse_genomes_project 19 377626 445919 - MGP_BALBcJ_P0050232 Lrp5 protein_coding protein_coding MGP_BALBcJ_T0003860.1 MGP_BALBcJ_G0003455.1 mouse_genomes_project 19 45113628 45124628 - Gm16068 antisense antisense MGP_BALBcJ_T0051204.1 MGP_BALBcJ_G0024889.1 mouse_genomes_project 19 9610737 9612710 - MGP_BALBcJ_P0051204 Cntf protein_coding protein_coding MGP_BALBcJ_T0017684.1 MGP_BALBcJ_G0015327.1 mouse_genomes_project 19 40176931 40179664 + Gm16244 processed_transcript processed_transcript MGP_BALBcJ_T0017685.1 MGP_BALBcJ_G0015327.1 mouse_genomes_project 19 40177009 40178163 + Gm16244 processed_transcript processed_transcript MGP_BALBcJ_T0051768.1 MGP_BALBcJ_G0025116.1 mouse_genomes_project 19 39676606 39823635 - MGP_BALBcJ_P0051768 Crtac1 protein_coding protein_coding MGP_BALBcJ_T0052006.1 MGP_BALBcJ_G0025192.1 mouse_genomes_project 19 44552210 44568476 + MGP_BALBcJ_P0052006 Taf5 protein_coding protein_coding MGP_BALBcJ_T0051546.1 MGP_BALBcJ_G0025041.1 mouse_genomes_project 19 32188340 32241656 + MGP_BALBcJ_P0051546 Kif20b protein_coding protein_coding MGP_BALBcJ_T0051232.1 MGP_BALBcJ_G0024915.1 mouse_genomes_project 19 10389849 10394551 + MGP_BALBcJ_P0051232 protein_coding protein_coding MGP_BALBcJ_T0052211.1 MGP_BALBcJ_G0025254.1 mouse_genomes_project 19 56602965 56630764 + MGP_BALBcJ_P0052211 Eno4 protein_coding protein_coding MGP_BALBcJ_T0052212.1 MGP_BALBcJ_G0025254.1 mouse_genomes_project 19 56602965 56630766 + MGP_BALBcJ_P0052212 Eno4 protein_coding protein_coding MGP_BALBcJ_T0052213.1 MGP_BALBcJ_G0025254.1 mouse_genomes_project 19 56612913 56630762 + MGP_BALBcJ_P0052213 Eno4 protein_coding protein_coding MGP_BALBcJ_T0052214.1 MGP_BALBcJ_G0025254.1 mouse_genomes_project 19 56615193 56630278 + MGP_BALBcJ_P0052214 Eno4 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052151.1 MGP_BALBcJ_G0025239.1 mouse_genomes_project 19 54415534 54450055 - MGP_BALBcJ_P0052151 Ccdc186 protein_coding protein_coding MGP_BALBcJ_T0052152.1 MGP_BALBcJ_G0025239.1 mouse_genomes_project 19 54418584 54423142 - MGP_BALBcJ_P0052152 Ccdc186 protein_coding protein_coding MGP_BALBcJ_T0052153.1 MGP_BALBcJ_G0025239.1 mouse_genomes_project 19 54419016 54441548 - MGP_BALBcJ_P0052153 Ccdc186 protein_coding protein_coding MGP_BALBcJ_T0052154.1 MGP_BALBcJ_G0025239.1 mouse_genomes_project 19 54421015 54425369 - Ccdc186 protein_coding retained_intron MGP_BALBcJ_T0052155.1 MGP_BALBcJ_G0025239.1 mouse_genomes_project 19 54425216 54428847 - Ccdc186 protein_coding retained_intron MGP_BALBcJ_T0052156.1 MGP_BALBcJ_G0025239.1 mouse_genomes_project 19 54427899 54450055 - Ccdc186 protein_coding retained_intron MGP_BALBcJ_T0010312.1 MGP_BALBcJ_G0008437.1 mouse_genomes_project 19 58887828 58887937 - Gm22774 miRNA miRNA MGP_BALBcJ_T0099634.1 MGP_BALBcJ_G0037670.1 mouse_genomes_project 19 9498401 9498508 + Gm24521 snRNA snRNA MGP_BALBcJ_T0003849.1 MGP_BALBcJ_G0003447.1 mouse_genomes_project 19 35632764 35649646 - Gm42723 antisense antisense MGP_BALBcJ_T0003850.1 MGP_BALBcJ_G0003447.1 mouse_genomes_project 19 35648587 35649631 - Gm42723 antisense antisense MGP_BALBcJ_T0102374.1 MGP_BALBcJ_G0040190.1 mouse_genomes_project 19 8452130 8455812 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0013360.1 MGP_BALBcJ_G0011457.1 mouse_genomes_project 19 12895440 12895996 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050432.1 MGP_BALBcJ_G0024642.1 mouse_genomes_project 19 1651655 1654818 + MGP_BALBcJ_P0050432 Ccdc87 protein_coding protein_coding MGP_BALBcJ_T0007037.1 MGP_BALBcJ_G0005778.1 mouse_genomes_project 19 2659059 2680827 - Neat1 lincRNA lincRNA MGP_BALBcJ_T0007038.1 MGP_BALBcJ_G0005778.1 mouse_genomes_project 19 2677655 2680825 - Neat1 lincRNA lincRNA MGP_BALBcJ_T0007039.1 MGP_BALBcJ_G0005778.1 mouse_genomes_project 19 2679029 2680608 - Neat1 lincRNA lincRNA MGP_BALBcJ_T0050811.1 MGP_BALBcJ_G0024746.1 mouse_genomes_project 19 3866411 3870140 - MGP_BALBcJ_P0050811 Nudt22 protein_coding protein_coding MGP_BALBcJ_T0050812.1 MGP_BALBcJ_G0024746.1 mouse_genomes_project 19 3866411 3870060 - MGP_BALBcJ_P0050812 Nudt22 protein_coding protein_coding MGP_BALBcJ_T0050813.1 MGP_BALBcJ_G0024746.1 mouse_genomes_project 19 3866412 3868907 - Nudt22 protein_coding retained_intron MGP_BALBcJ_T0007062.1 MGP_BALBcJ_G0005795.1 mouse_genomes_project 19 29532572 29534540 + 2700046G09Rik lincRNA lincRNA MGP_BALBcJ_T0052219.1 MGP_BALBcJ_G0025258.1 mouse_genomes_project 19 56920703 56955817 + MGP_BALBcJ_P0052219 Slc18a2 protein_coding protein_coding MGP_BALBcJ_T0010290.1 MGP_BALBcJ_G0008415.1 mouse_genomes_project 19 32231286 32231360 + Mir1950 miRNA miRNA MGP_BALBcJ_T0051924.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43499713 43513636 - MGP_BALBcJ_P0051924 Ldb1 protein_coding protein_coding MGP_BALBcJ_T0051925.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43499714 43506901 - MGP_BALBcJ_P0051925 Ldb1 protein_coding protein_coding MGP_BALBcJ_T0051926.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43499736 43513633 - MGP_BALBcJ_P0051926 Ldb1 protein_coding protein_coding MGP_BALBcJ_T0051927.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43499809 43513632 - MGP_BALBcJ_P0051927 Ldb1 protein_coding protein_coding MGP_BALBcJ_T0051928.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43499809 43513336 - MGP_BALBcJ_P0051928 Ldb1 protein_coding protein_coding MGP_BALBcJ_T0051929.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43500865 43501999 - Ldb1 protein_coding retained_intron MGP_BALBcJ_T0051930.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43501089 43513276 - MGP_BALBcJ_P0051930 Ldb1 protein_coding protein_coding MGP_BALBcJ_T0051931.1 MGP_BALBcJ_G0025168.1 mouse_genomes_project 19 43501171 43503132 - Ldb1 protein_coding retained_intron MGP_BALBcJ_T0051820.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41453811 41488530 - MGP_BALBcJ_P0051820 Erlin1 protein_coding protein_coding MGP_BALBcJ_T0051821.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41453811 41488779 - MGP_BALBcJ_P0051821 Erlin1 protein_coding protein_coding MGP_BALBcJ_T0051822.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41453811 41488789 - MGP_BALBcJ_P0051822 Erlin1 protein_coding protein_coding MGP_BALBcJ_T0051823.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41474930 41488760 - MGP_BALBcJ_P0051823 Erlin1 protein_coding protein_coding MGP_BALBcJ_T0051824.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41477846 41488401 - MGP_BALBcJ_P0051824 Erlin1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051825.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41477848 41486690 - MGP_BALBcJ_P0051825 Erlin1 protein_coding protein_coding MGP_BALBcJ_T0051826.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41485078 41488748 - Erlin1 protein_coding retained_intron MGP_BALBcJ_T0051827.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41486479 41488700 - Erlin1 protein_coding retained_intron MGP_BALBcJ_T0051828.1 MGP_BALBcJ_G0025133.1 mouse_genomes_project 19 41488321 41488694 - MGP_BALBcJ_P0051828 Erlin1 protein_coding protein_coding MGP_BALBcJ_T0051643.1 MGP_BALBcJ_G0025072.1 mouse_genomes_project 19 36417407 36453209 + MGP_BALBcJ_P0051643 Cyp2c65 protein_coding protein_coding MGP_BALBcJ_T0052011.1 MGP_BALBcJ_G0025196.1 mouse_genomes_project 19 44634518 44637590 - MGP_BALBcJ_P0052011 Calhm1 protein_coding protein_coding MGP_BALBcJ_T0050319.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 890127 904088 + MGP_BALBcJ_P0050319 Pitpnm1 protein_coding protein_coding MGP_BALBcJ_T0050320.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 890175 904088 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0050321.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 890398 895052 + MGP_BALBcJ_P0050321 Pitpnm1 protein_coding protein_coding MGP_BALBcJ_T0050322.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 890751 904088 + MGP_BALBcJ_P0050322 Pitpnm1 protein_coding protein_coding MGP_BALBcJ_T0050323.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 898326 900030 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0050324.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 898874 902340 + Pitpnm1 protein_coding processed_transcript MGP_BALBcJ_T0050325.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 899770 900857 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0050326.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 900922 902147 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0050327.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 901283 902494 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0050328.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 902051 903738 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0050329.1 MGP_BALBcJ_G0024612.1 mouse_genomes_project 19 902442 904088 + Pitpnm1 protein_coding retained_intron MGP_BALBcJ_T0099638.1 MGP_BALBcJ_G0037674.1 mouse_genomes_project 19 14854061 14854164 - Gm22880 snRNA snRNA MGP_BALBcJ_T0013367.1 MGP_BALBcJ_G0011464.1 mouse_genomes_project 19 25826421 25826814 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050224.1 MGP_BALBcJ_G0024590.1 mouse_genomes_project 19 163331 167874 - MGP_BALBcJ_P0050224 Gal protein_coding protein_coding MGP_BALBcJ_T0052078.1 MGP_BALBcJ_G0025217.1 mouse_genomes_project 19 50962270 50973723 - MGP_BALBcJ_P0052078 Smndc1 protein_coding protein_coding MGP_BALBcJ_T0051997.1 MGP_BALBcJ_G0025187.1 mouse_genomes_project 19 44187032 44221696 + MGP_BALBcJ_P0051997 As3mt protein_coding protein_coding MGP_BALBcJ_T0051695.1 MGP_BALBcJ_G0025087.1 mouse_genomes_project 19 38264533 38287965 + MGP_BALBcJ_P0051695 Zfp518a protein_coding protein_coding MGP_BALBcJ_T0051059.1 MGP_BALBcJ_G0024827.1 mouse_genomes_project 19 7719700 7731692 - MGP_BALBcJ_P0051059 Tmem132a protein_coding protein_coding MGP_BALBcJ_T0051060.1 MGP_BALBcJ_G0024827.1 mouse_genomes_project 19 7719712 7731530 - MGP_BALBcJ_P0051060 Tmem132a protein_coding protein_coding MGP_BALBcJ_T0051709.1 MGP_BALBcJ_G0025096.1 mouse_genomes_project 19 38966182 38969119 + MGP_BALBcJ_P0051709 AI606181 protein_coding protein_coding MGP_BALBcJ_T0051796.1 MGP_BALBcJ_G0025124.1 mouse_genomes_project 19 41015546 41019120 + MGP_BALBcJ_P0051796 Nkx2-3 protein_coding protein_coding MGP_BALBcJ_T0051780.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40152400 40177879 - MGP_BALBcJ_P0051780 Hps1 protein_coding protein_coding MGP_BALBcJ_T0051781.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40152490 40177860 - Hps1 protein_coding retained_intron MGP_BALBcJ_T0051782.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40152490 40176547 - MGP_BALBcJ_P0051782 Hps1 protein_coding protein_coding MGP_BALBcJ_T0051783.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40152492 40177877 - MGP_BALBcJ_P0051783 Hps1 protein_coding protein_coding MGP_BALBcJ_T0051784.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40152876 40155110 - MGP_BALBcJ_P0051784 Hps1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051785.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40155361 40177866 - MGP_BALBcJ_P0051785 Hps1 protein_coding protein_coding MGP_BALBcJ_T0051786.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40155761 40176162 - MGP_BALBcJ_P0051786 Hps1 protein_coding protein_coding MGP_BALBcJ_T0051787.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40157646 40161159 - Hps1 protein_coding retained_intron MGP_BALBcJ_T0051788.1 MGP_BALBcJ_G0025120.1 mouse_genomes_project 19 40164753 40167755 - Hps1 protein_coding retained_intron MGP_BALBcJ_T0050480.1 MGP_BALBcJ_G0024665.1 mouse_genomes_project 19 2173825 2178695 - MGP_BALBcJ_P0050480 Cst6 protein_coding protein_coding MGP_BALBcJ_T0098563.1 MGP_BALBcJ_G0036617.1 mouse_genomes_project 19 40553542 40553650 - Gm22135 rRNA rRNA MGP_BALBcJ_T0050602.1 MGP_BALBcJ_G0024706.1 mouse_genomes_project 19 2909933 2911502 + MGP_BALBcJ_P0050602 Gm9843 protein_coding protein_coding MGP_BALBcJ_T0051946.1 MGP_BALBcJ_G0025171.1 mouse_genomes_project 19 43604329 43607732 + MGP_BALBcJ_P0051946 Elovl3 protein_coding protein_coding MGP_BALBcJ_T0099633.1 MGP_BALBcJ_G0037669.1 mouse_genomes_project 19 4133742 4133846 + Gm22113 snRNA snRNA MGP_BALBcJ_T0052227.1 MGP_BALBcJ_G0025262.1 mouse_genomes_project 19 57864940 57892007 - MGP_BALBcJ_P0052227 Fam204a protein_coding unknown_likely_coding MGP_BALBcJ_T0051250.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12855122 12876232 - MGP_BALBcJ_P0051250 Psat1 protein_coding protein_coding MGP_BALBcJ_T0051251.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12855571 12875787 - MGP_BALBcJ_P0051251 Psat1 protein_coding protein_coding MGP_BALBcJ_T0051252.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12855574 12860896 - Psat1 protein_coding retained_intron MGP_BALBcJ_T0051253.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12866187 12899160 - MGP_BALBcJ_P0051253 Psat1 protein_coding protein_coding MGP_BALBcJ_T0051254.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12868025 12869524 - Psat1 protein_coding processed_transcript MGP_BALBcJ_T0051255.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12869589 12872602 - Psat1 protein_coding retained_intron MGP_BALBcJ_T0051256.1 MGP_BALBcJ_G0024932.1 mouse_genomes_project 19 12871689 12876103 - Psat1 protein_coding retained_intron MGP_BALBcJ_T0010293.1 MGP_BALBcJ_G0008418.1 mouse_genomes_project 19 38264531 38264618 + Mir8092 miRNA miRNA MGP_BALBcJ_T0098561.1 MGP_BALBcJ_G0036615.1 mouse_genomes_project 19 32874670 32874801 - Gm22853 rRNA rRNA MGP_BALBcJ_T0100900.1 MGP_BALBcJ_G0038936.1 mouse_genomes_project 19 5947450 5947598 - Snora57 snoRNA snoRNA MGP_BALBcJ_T0013377.1 MGP_BALBcJ_G0011474.1 mouse_genomes_project 19 49333929 49334306 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050604.1 MGP_BALBcJ_G0024707.1 mouse_genomes_project 19 2914412 2915693 + MGP_BALBcJ_P0050604 Znhit2 protein_coding protein_coding MGP_BALBcJ_T0051275.1 MGP_BALBcJ_G0024942.1 mouse_genomes_project 19 15558721 15611234 - MGP_BALBcJ_P0051275 Ostf1 protein_coding protein_coding MGP_BALBcJ_T0051276.1 MGP_BALBcJ_G0024942.1 mouse_genomes_project 19 15560387 15611185 - Ostf1 protein_coding retained_intron MGP_BALBcJ_T0051277.1 MGP_BALBcJ_G0024942.1 mouse_genomes_project 19 15572877 15611163 - Ostf1 protein_coding retained_intron MGP_BALBcJ_T0099635.1 MGP_BALBcJ_G0037671.1 mouse_genomes_project 19 10155341 10155448 - Gm22443 snRNA snRNA MGP_BALBcJ_T0051516.1 MGP_BALBcJ_G0025024.1 mouse_genomes_project 19 31260784 31297992 + MGP_BALBcJ_P0051516 Lipk protein_coding protein_coding MGP_BALBcJ_T0052079.1 MGP_BALBcJ_G0025218.1 mouse_genomes_project 19 51117411 51131014 + MGP_BALBcJ_P0052079 Dusp5 protein_coding protein_coding MGP_BALBcJ_T0051100.1 MGP_BALBcJ_G0024840.1 mouse_genomes_project 19 8075323 8084172 - MGP_BALBcJ_P0051100 Ms4a12 protein_coding protein_coding MGP_BALBcJ_T0013352.1 MGP_BALBcJ_G0011449.1 mouse_genomes_project 19 4589605 4590773 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098729.1 MGP_BALBcJ_G0036783.1 mouse_genomes_project 19 2659003 2659059 - Gm27702 sRNA sRNA MGP_BALBcJ_T0099632.1 MGP_BALBcJ_G0037668.1 mouse_genomes_project 19 1717222 1717332 + Gm25334 snRNA snRNA MGP_BALBcJ_T0050646.1 MGP_BALBcJ_G0024715.1 mouse_genomes_project 19 2970322 2972905 - MGP_BALBcJ_P0050646 Sac3d1 protein_coding protein_coding MGP_BALBcJ_T0051887.1 MGP_BALBcJ_G0025157.1 mouse_genomes_project 19 42673129 42676259 - MGP_BALBcJ_P0051887 Lbx1 protein_coding protein_coding MGP_BALBcJ_T0051181.1 MGP_BALBcJ_G0024879.1 mouse_genomes_project 19 9267191 9271397 + MGP_BALBcJ_P0051181 Pfpl protein_coding protein_coding MGP_BALBcJ_T0050642.1 MGP_BALBcJ_G0024713.1 mouse_genomes_project 19 2938208 2946148 + MGP_BALBcJ_P0050642 Cdca5 protein_coding protein_coding MGP_BALBcJ_T0050643.1 MGP_BALBcJ_G0024713.1 mouse_genomes_project 19 2938976 2946148 + Cdca5 protein_coding processed_transcript MGP_BALBcJ_T0050644.1 MGP_BALBcJ_G0024713.1 mouse_genomes_project 19 2939052 2946148 + Cdca5 protein_coding processed_transcript MGP_BALBcJ_T0050938.1 MGP_BALBcJ_G0024778.1 mouse_genomes_project 19 5859162 5861487 + MGP_BALBcJ_P0050938 Zbtb3 protein_coding protein_coding MGP_BALBcJ_T0051211.1 MGP_BALBcJ_G0024894.1 mouse_genomes_project 19 9747510 9748613 - MGP_BALBcJ_P0051211 Olfr1447 protein_coding protein_coding MGP_BALBcJ_T0052033.1 MGP_BALBcJ_G0025203.1 mouse_genomes_project 19 45153151 45199038 - MGP_BALBcJ_P0052033 Col17a1 protein_coding protein_coding MGP_BALBcJ_T0052034.1 MGP_BALBcJ_G0025203.1 mouse_genomes_project 19 45153151 45199038 - MGP_BALBcJ_P0052034 Col17a1 protein_coding protein_coding MGP_BALBcJ_T0052035.1 MGP_BALBcJ_G0025203.1 mouse_genomes_project 19 45154907 45156403 - Col17a1 protein_coding processed_transcript MGP_BALBcJ_T0052036.1 MGP_BALBcJ_G0025203.1 mouse_genomes_project 19 45176120 45177792 - Col17a1 protein_coding processed_transcript MGP_BALBcJ_T0050962.1 MGP_BALBcJ_G0024787.1 mouse_genomes_project 19 5947765 5949817 + MGP_BALBcJ_P0050962 1810009A15Rik protein_coding protein_coding MGP_BALBcJ_T0050964.1 MGP_BALBcJ_G0024787.1 mouse_genomes_project 19 5947811 5949682 + 1810009A15Rik protein_coding retained_intron MGP_BALBcJ_T0050965.1 MGP_BALBcJ_G0024787.1 mouse_genomes_project 19 5947827 5949482 + MGP_BALBcJ_P0050965 1810009A15Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050966.1 MGP_BALBcJ_G0024787.1 mouse_genomes_project 19 5947841 5949401 + 1810009A15Rik protein_coding retained_intron MGP_BALBcJ_T0050967.1 MGP_BALBcJ_G0024787.1 mouse_genomes_project 19 5947851 5949677 + 1810009A15Rik protein_coding retained_intron MGP_BALBcJ_T0050215.1 MGP_BALBcJ_G0024587.1 mouse_genomes_project 19 35843 45788 + MGP_BALBcJ_P0050215 Mrpl21 protein_coding protein_coding MGP_BALBcJ_T0050216.1 MGP_BALBcJ_G0024587.1 mouse_genomes_project 19 35997 42130 + Mrpl21 protein_coding retained_intron MGP_BALBcJ_T0050217.1 MGP_BALBcJ_G0024587.1 mouse_genomes_project 19 36002 38265 + Mrpl21 protein_coding retained_intron MGP_BALBcJ_T0050218.1 MGP_BALBcJ_G0024587.1 mouse_genomes_project 19 36002 44152 + MGP_BALBcJ_P0050218 Mrpl21 protein_coding protein_coding MGP_BALBcJ_T0050219.1 MGP_BALBcJ_G0024587.1 mouse_genomes_project 19 36006 40679 + MGP_BALBcJ_P0050219 Mrpl21 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050220.1 MGP_BALBcJ_G0024587.1 mouse_genomes_project 19 39750 44146 + Mrpl21 protein_coding retained_intron MGP_BALBcJ_T0051513.1 MGP_BALBcJ_G0025022.1 mouse_genomes_project 19 30720231 30816130 - protein_coding processed_transcript MGP_BALBcJ_T0051514.1 MGP_BALBcJ_G0025022.1 mouse_genomes_project 19 30782003 30784870 - protein_coding retained_intron MGP_BALBcJ_T0007093.1 MGP_BALBcJ_G0005818.1 mouse_genomes_project 19 56255703 56279344 + 1810007D17Rik lincRNA lincRNA MGP_BALBcJ_T0051819.1 MGP_BALBcJ_G0025132.1 mouse_genomes_project 19 41423353 41448115 - MGP_BALBcJ_P0051819 Cyp2c44 protein_coding protein_coding MGP_BALBcJ_T0050560.1 MGP_BALBcJ_G0024692.1 mouse_genomes_project 19 2563246 2566871 - MGP_BALBcJ_P0050560 Sssca1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050561.1 MGP_BALBcJ_G0024692.1 mouse_genomes_project 19 2565460 2566879 - MGP_BALBcJ_P0050561 Sssca1 protein_coding protein_coding MGP_BALBcJ_T0050562.1 MGP_BALBcJ_G0024692.1 mouse_genomes_project 19 2565464 2566818 - Sssca1 protein_coding retained_intron MGP_BALBcJ_T0050563.1 MGP_BALBcJ_G0024692.1 mouse_genomes_project 19 2565464 2566890 - MGP_BALBcJ_P0050563 Sssca1 protein_coding protein_coding MGP_BALBcJ_T0050564.1 MGP_BALBcJ_G0024692.1 mouse_genomes_project 19 2565568 2566633 - MGP_BALBcJ_P0050564 Sssca1 protein_coding protein_coding MGP_BALBcJ_T0050565.1 MGP_BALBcJ_G0024692.1 mouse_genomes_project 19 2566049 2566857 - Sssca1 protein_coding retained_intron MGP_BALBcJ_T0051517.1 MGP_BALBcJ_G0025025.1 mouse_genomes_project 19 31317490 31335768 + MGP_BALBcJ_P0051517 Lipn protein_coding protein_coding MGP_BALBcJ_T0051518.1 MGP_BALBcJ_G0025025.1 mouse_genomes_project 19 31317510 31323704 + MGP_BALBcJ_P0051518 Lipn protein_coding protein_coding MGP_BALBcJ_T0051519.1 MGP_BALBcJ_G0025025.1 mouse_genomes_project 19 31317661 31332132 + MGP_BALBcJ_P0051519 Lipn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010287.1 MGP_BALBcJ_G0008412.1 mouse_genomes_project 19 31640364 31640473 - Gm23060 miRNA miRNA MGP_BALBcJ_T0051309.1 MGP_BALBcJ_G0024954.1 mouse_genomes_project 19 18536058 18538042 + MGP_BALBcJ_P0051309 Gm3443 protein_coding protein_coding MGP_BALBcJ_T0050589.1 MGP_BALBcJ_G0024701.1 mouse_genomes_project 19 2814190 2836688 - MGP_BALBcJ_P0050589 Slc22a20 protein_coding protein_coding MGP_BALBcJ_T0010269.1 MGP_BALBcJ_G0008394.1 mouse_genomes_project 19 3429715 3429841 + Gm26460 miRNA miRNA MGP_BALBcJ_T0051153.1 MGP_BALBcJ_G0024856.1 mouse_genomes_project 19 8549778 8568057 - MGP_BALBcJ_P0051153 Oosp1 protein_coding protein_coding MGP_BALBcJ_T0051154.1 MGP_BALBcJ_G0024856.1 mouse_genomes_project 19 8549853 8567935 - MGP_BALBcJ_P0051154 Oosp1 protein_coding protein_coding MGP_BALBcJ_T0051155.1 MGP_BALBcJ_G0024856.1 mouse_genomes_project 19 8549991 8567941 - MGP_BALBcJ_P0051155 Oosp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051993.1 MGP_BALBcJ_G0025185.1 mouse_genomes_project 19 44146837 44152647 - MGP_BALBcJ_P0051993 Cyp17a1 protein_coding protein_coding MGP_BALBcJ_T0051994.1 MGP_BALBcJ_G0025185.1 mouse_genomes_project 19 44147759 44149186 - Cyp17a1 protein_coding retained_intron MGP_BALBcJ_T0051995.1 MGP_BALBcJ_G0025185.1 mouse_genomes_project 19 44150398 44150964 - Cyp17a1 protein_coding retained_intron MGP_BALBcJ_T0051159.1 MGP_BALBcJ_G0024859.1 mouse_genomes_project 19 8649023 8653560 + MGP_BALBcJ_P0051159 Mrpl16 protein_coding protein_coding MGP_BALBcJ_T0052028.1 MGP_BALBcJ_G0025202.1 mouse_genomes_project 19 45083546 45152058 + MGP_BALBcJ_P0052028 Slk protein_coding protein_coding MGP_BALBcJ_T0052029.1 MGP_BALBcJ_G0025202.1 mouse_genomes_project 19 45083887 45149267 + MGP_BALBcJ_P0052029 Slk protein_coding protein_coding MGP_BALBcJ_T0052030.1 MGP_BALBcJ_G0025202.1 mouse_genomes_project 19 45128195 45132856 + Slk protein_coding retained_intron MGP_BALBcJ_T0052031.1 MGP_BALBcJ_G0025202.1 mouse_genomes_project 19 45130183 45133356 + Slk protein_coding retained_intron MGP_BALBcJ_T0052032.1 MGP_BALBcJ_G0025202.1 mouse_genomes_project 19 45141941 45143266 + Slk protein_coding retained_intron MGP_BALBcJ_T0050493.1 MGP_BALBcJ_G0024671.1 mouse_genomes_project 19 2253648 2255808 + AI837181 protein_coding processed_transcript MGP_BALBcJ_T0050494.1 MGP_BALBcJ_G0024671.1 mouse_genomes_project 19 2253648 2255808 + MGP_BALBcJ_P0050494 AI837181 protein_coding protein_coding MGP_BALBcJ_T0050455.1 MGP_BALBcJ_G0024653.1 mouse_genomes_project 19 1856394 1864900 + MGP_BALBcJ_P0050455 Brms1 protein_coding protein_coding MGP_BALBcJ_T0052054.1 MGP_BALBcJ_G0025209.1 mouse_genomes_project 19 45726356 46331629 + MGP_BALBcJ_P0052054 Sorcs3 protein_coding protein_coding MGP_BALBcJ_T0051744.1 MGP_BALBcJ_G0025105.1 mouse_genomes_project 19 39362207 39420181 + MGP_BALBcJ_P0051744 Ubtd1 protein_coding protein_coding MGP_BALBcJ_T0051977.1 MGP_BALBcJ_G0025179.1 mouse_genomes_project 19 43852233 43870868 - MGP_BALBcJ_P0051977 Actr1a protein_coding protein_coding MGP_BALBcJ_T0052206.1 MGP_BALBcJ_G0025250.1 mouse_genomes_project 19 56382490 56397717 + MGP_BALBcJ_P0052206 Pnliprp1 protein_coding protein_coding MGP_BALBcJ_T0011451.1 MGP_BALBcJ_G0009576.1 mouse_genomes_project 19 2679986 2680096 - Gm27505 misc_RNA misc_RNA MGP_BALBcJ_T0051215.1 MGP_BALBcJ_G0024898.1 mouse_genomes_project 19 9849705 9850638 + MGP_BALBcJ_P0051215 Olfr1451 protein_coding protein_coding MGP_BALBcJ_T0050222.1 MGP_BALBcJ_G0024589.1 mouse_genomes_project 19 142297 151587 + MGP_BALBcJ_P0050222 Mtl5 protein_coding protein_coding MGP_BALBcJ_T0050223.1 MGP_BALBcJ_G0024589.1 mouse_genomes_project 19 142362 160521 + MGP_BALBcJ_P0050223 Mtl5 protein_coding protein_coding MGP_BALBcJ_T0051090.1 MGP_BALBcJ_G0024836.1 mouse_genomes_project 19 7929483 7942998 - MGP_BALBcJ_P0051090 Ms4a8a protein_coding protein_coding MGP_BALBcJ_T0051091.1 MGP_BALBcJ_G0024836.1 mouse_genomes_project 19 7937466 7942998 - Ms4a8a protein_coding retained_intron MGP_BALBcJ_T0011450.1 MGP_BALBcJ_G0009575.1 mouse_genomes_project 19 2679634 2679786 - Gm27533 misc_RNA misc_RNA MGP_BALBcJ_T0051230.1 MGP_BALBcJ_G0024913.1 mouse_genomes_project 19 10355469 10356414 + MGP_BALBcJ_P0051230 Olfr1474 protein_coding protein_coding MGP_BALBcJ_T0010283.1 MGP_BALBcJ_G0008408.1 mouse_genomes_project 19 20156757 20156878 + Mir1192 miRNA miRNA MGP_BALBcJ_T0051766.1 MGP_BALBcJ_G0025115.1 mouse_genomes_project 19 39641421 39664025 + MGP_BALBcJ_P0051766 Golga7b protein_coding protein_coding MGP_BALBcJ_T0051767.1 MGP_BALBcJ_G0025115.1 mouse_genomes_project 19 39649566 39664025 + MGP_BALBcJ_P0051767 Golga7b protein_coding protein_coding MGP_BALBcJ_T0013362.1 MGP_BALBcJ_G0011459.1 mouse_genomes_project 19 17577579 17578263 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050221.1 MGP_BALBcJ_G0024588.1 mouse_genomes_project 19 76839 139147 + MGP_BALBcJ_P0050221 Cpt1a protein_coding protein_coding MGP_BALBcJ_T0051008.1 MGP_BALBcJ_G0024805.1 mouse_genomes_project 19 6914861 6952561 - MGP_BALBcJ_P0051008 Fads2 protein_coding protein_coding MGP_BALBcJ_T0003861.1 MGP_BALBcJ_G0003456.1 mouse_genomes_project 19 51420746 51427451 - Gm16299 antisense antisense MGP_BALBcJ_T0010289.1 MGP_BALBcJ_G0008414.1 mouse_genomes_project 19 32084682 32084769 - Mir107 miRNA miRNA MGP_BALBcJ_T0050819.1 MGP_BALBcJ_G0024752.1 mouse_genomes_project 19 4085506 4093396 - MGP_BALBcJ_P0050819 Otub1 protein_coding protein_coding MGP_BALBcJ_T0050820.1 MGP_BALBcJ_G0024752.1 mouse_genomes_project 19 4085514 4093314 - MGP_BALBcJ_P0050820 Otub1 protein_coding protein_coding MGP_BALBcJ_T0050821.1 MGP_BALBcJ_G0024752.1 mouse_genomes_project 19 4086836 4087761 - Otub1 protein_coding retained_intron MGP_BALBcJ_T0050822.1 MGP_BALBcJ_G0024752.1 mouse_genomes_project 19 4087007 4092855 - MGP_BALBcJ_P0050822 Otub1 protein_coding protein_coding MGP_BALBcJ_T0050823.1 MGP_BALBcJ_G0024752.1 mouse_genomes_project 19 4087037 4091499 - Otub1 protein_coding retained_intron MGP_BALBcJ_T0099637.1 MGP_BALBcJ_G0037673.1 mouse_genomes_project 19 12628825 12628932 + Gm24319 snRNA snRNA MGP_BALBcJ_T0010280.1 MGP_BALBcJ_G0008405.1 mouse_genomes_project 19 13277543 13277656 - Mir496b miRNA miRNA MGP_BALBcJ_T0011462.1 MGP_BALBcJ_G0009587.1 mouse_genomes_project 19 36231593 36231713 + Gm25838 misc_RNA misc_RNA MGP_BALBcJ_T0011456.1 MGP_BALBcJ_G0009581.1 mouse_genomes_project 19 15759179 15759395 - Gm24190 misc_RNA misc_RNA MGP_BALBcJ_T0050959.1 MGP_BALBcJ_G0024786.1 mouse_genomes_project 19 5942656 5951563 + MGP_BALBcJ_P0050959 Lbhd1 protein_coding protein_coding MGP_BALBcJ_T0050960.1 MGP_BALBcJ_G0024786.1 mouse_genomes_project 19 5942848 5945954 + Lbhd1 protein_coding retained_intron MGP_BALBcJ_T0050961.1 MGP_BALBcJ_G0024786.1 mouse_genomes_project 19 5942854 5946171 + MGP_BALBcJ_P0050961 Lbhd1 protein_coding protein_coding MGP_BALBcJ_T0050968.1 MGP_BALBcJ_G0024786.1 mouse_genomes_project 19 5948190 5949594 + Lbhd1 protein_coding processed_transcript MGP_BALBcJ_T0051242.1 MGP_BALBcJ_G0024925.1 mouse_genomes_project 19 10735795 10736820 - MGP_BALBcJ_P0051242 Olfr1500 protein_coding protein_coding MGP_BALBcJ_T0051947.1 MGP_BALBcJ_G0025172.1 mouse_genomes_project 19 43608109 43620825 - MGP_BALBcJ_P0051947 Pitx3 protein_coding protein_coding MGP_BALBcJ_T0051948.1 MGP_BALBcJ_G0025172.1 mouse_genomes_project 19 43608919 43609714 - Pitx3 protein_coding retained_intron MGP_BALBcJ_T0051949.1 MGP_BALBcJ_G0025172.1 mouse_genomes_project 19 43609456 43613414 - MGP_BALBcJ_P0051949 Pitx3 protein_coding protein_coding MGP_BALBcJ_T0050375.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1079207 1100401 - MGP_BALBcJ_P0050375 Adrbk1 protein_coding protein_coding MGP_BALBcJ_T0050376.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1079216 1100215 - MGP_BALBcJ_P0050376 Adrbk1 protein_coding protein_coding MGP_BALBcJ_T0050377.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1079216 1100290 - MGP_BALBcJ_P0050377 Adrbk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050378.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1079217 1100401 - MGP_BALBcJ_P0050378 Adrbk1 protein_coding protein_coding MGP_BALBcJ_T0050379.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1081357 1083104 - Adrbk1 protein_coding retained_intron MGP_BALBcJ_T0050380.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1082096 1083095 - MGP_BALBcJ_P0050380 Adrbk1 protein_coding protein_coding MGP_BALBcJ_T0050381.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1082126 1084184 - MGP_BALBcJ_P0050381 Adrbk1 protein_coding protein_coding MGP_BALBcJ_T0050382.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1084162 1085512 - Adrbk1 protein_coding retained_intron MGP_BALBcJ_T0050383.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1085047 1100287 - Adrbk1 protein_coding retained_intron MGP_BALBcJ_T0050384.1 MGP_BALBcJ_G0024627.1 mouse_genomes_project 19 1086267 1099464 - MGP_BALBcJ_P0050384 Adrbk1 protein_coding protein_coding MGP_BALBcJ_T0003865.1 MGP_BALBcJ_G0003460.1 mouse_genomes_project 19 57086750 57120343 - Emx2os antisense antisense MGP_BALBcJ_T0051861.1 MGP_BALBcJ_G0025146.1 mouse_genomes_project 19 42003692 42004797 + Hif1an protein_coding retained_intron MGP_BALBcJ_T0051862.1 MGP_BALBcJ_G0025146.1 mouse_genomes_project 19 42003692 42017113 + MGP_BALBcJ_P0051862 Hif1an protein_coding protein_coding MGP_BALBcJ_T0050848.1 MGP_BALBcJ_G0024757.1 mouse_genomes_project 19 4245932 4272973 - MGP_BALBcJ_P0050848 AI846148 protein_coding protein_coding MGP_BALBcJ_T0050411.1 MGP_BALBcJ_G0024635.1 mouse_genomes_project 19 1431354 1505339 - MGP_BALBcJ_P0050411 Gm960 protein_coding unknown_likely_coding MGP_BALBcJ_T0050412.1 MGP_BALBcJ_G0024635.1 mouse_genomes_project 19 1431374 1505801 - MGP_BALBcJ_P0050412 Gm960 protein_coding protein_coding MGP_BALBcJ_T0050413.1 MGP_BALBcJ_G0024635.1 mouse_genomes_project 19 1453350 1505448 - MGP_BALBcJ_P0050413 Gm960 protein_coding protein_coding MGP_BALBcJ_T0010268.1 MGP_BALBcJ_G0008393.1 mouse_genomes_project 19 3209963 3210028 + Mir6989 miRNA miRNA MGP_BALBcJ_T0052093.1 MGP_BALBcJ_G0025225.1 mouse_genomes_project 19 52669212 52698544 - MGP_BALBcJ_P0052093 Gpam protein_coding protein_coding MGP_BALBcJ_T0050428.1 MGP_BALBcJ_G0024640.1 mouse_genomes_project 19 1613864 1624909 - MGP_BALBcJ_P0050428 Rbm14 protein_coding protein_coding MGP_BALBcJ_T0050429.1 MGP_BALBcJ_G0024640.1 mouse_genomes_project 19 1614217 1624860 - MGP_BALBcJ_P0050429 Rbm14 protein_coding protein_coding MGP_BALBcJ_T0050430.1 MGP_BALBcJ_G0024640.1 mouse_genomes_project 19 1615072 1624787 - MGP_BALBcJ_P0050430 Rbm14 protein_coding protein_coding MGP_BALBcJ_T0051970.1 MGP_BALBcJ_G0025176.1 mouse_genomes_project 19 43803823 43806093 + MGP_BALBcJ_P0051970 Fbxl15 protein_coding protein_coding MGP_BALBcJ_T0051971.1 MGP_BALBcJ_G0025176.1 mouse_genomes_project 19 43803826 43806092 + MGP_BALBcJ_P0051971 Fbxl15 protein_coding protein_coding MGP_BALBcJ_T0003848.1 MGP_BALBcJ_G0003446.1 mouse_genomes_project 19 26139558 26142043 + 1700018L02Rik antisense antisense MGP_BALBcJ_T0050777.1 MGP_BALBcJ_G0024733.1 mouse_genomes_project 19 3714986 3728570 - MGP_BALBcJ_P0050777 Ccdc88b protein_coding protein_coding MGP_BALBcJ_T0051972.1 MGP_BALBcJ_G0025177.1 mouse_genomes_project 19 43805458 43814323 - MGP_BALBcJ_P0051972 Cuedc2 protein_coding protein_coding MGP_BALBcJ_T0051973.1 MGP_BALBcJ_G0025177.1 mouse_genomes_project 19 43805458 43814323 - MGP_BALBcJ_P0051973 Cuedc2 protein_coding protein_coding MGP_BALBcJ_T0051310.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18562687 18635941 - MGP_BALBcJ_P0051310 1110059E24Rik protein_coding protein_coding MGP_BALBcJ_T0051311.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18579271 18635921 - MGP_BALBcJ_P0051311 1110059E24Rik protein_coding protein_coding MGP_BALBcJ_T0051312.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18579662 18636013 - MGP_BALBcJ_P0051312 1110059E24Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051313.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18580131 18613063 - MGP_BALBcJ_P0051313 1110059E24Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051314.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18580286 18636130 - MGP_BALBcJ_P0051314 1110059E24Rik protein_coding protein_coding MGP_BALBcJ_T0051315.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18580775 18586326 - 1110059E24Rik protein_coding processed_transcript MGP_BALBcJ_T0051316.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18580787 18635823 - MGP_BALBcJ_P0051316 1110059E24Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051317.1 MGP_BALBcJ_G0024955.1 mouse_genomes_project 19 18597208 18636006 - 1110059E24Rik protein_coding retained_intron MGP_BALBcJ_T0050884.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5761466 5776967 - MGP_BALBcJ_P0050884 Slc3a2 protein_coding protein_coding MGP_BALBcJ_T0050885.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5763208 5767256 - MGP_BALBcJ_P0050885 Slc3a2 protein_coding protein_coding MGP_BALBcJ_T0050886.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5763634 5767257 - MGP_BALBcJ_P0050886 Slc3a2 protein_coding protein_coding MGP_BALBcJ_T0050887.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5763666 5768334 - MGP_BALBcJ_P0050887 Slc3a2 protein_coding protein_coding MGP_BALBcJ_T0050888.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5767056 5777070 - Slc3a2 protein_coding retained_intron MGP_BALBcJ_T0050889.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5767309 5767997 - MGP_BALBcJ_P0050889 Slc3a2 protein_coding protein_coding MGP_BALBcJ_T0050890.1 MGP_BALBcJ_G0024771.1 mouse_genomes_project 19 5767320 5768084 - MGP_BALBcJ_P0050890 Slc3a2 protein_coding protein_coding MGP_BALBcJ_T0052245.1 MGP_BALBcJ_G0025270.1 mouse_genomes_project 19 58579356 58774560 + MGP_BALBcJ_P0052245 Grk5 protein_coding protein_coding MGP_BALBcJ_T0050537.1 MGP_BALBcJ_G0024686.1 mouse_genomes_project 19 2484279 2497605 - MGP_BALBcJ_P0050537 Sipa1 protein_coding protein_coding MGP_BALBcJ_T0050538.1 MGP_BALBcJ_G0024686.1 mouse_genomes_project 19 2484279 2497605 - MGP_BALBcJ_P0050538 Sipa1 protein_coding protein_coding MGP_BALBcJ_T0050539.1 MGP_BALBcJ_G0024686.1 mouse_genomes_project 19 2484279 2497605 - MGP_BALBcJ_P0050539 Sipa1 protein_coding protein_coding MGP_BALBcJ_T0050540.1 MGP_BALBcJ_G0024686.1 mouse_genomes_project 19 2484279 2497605 - MGP_BALBcJ_P0050540 Sipa1 protein_coding protein_coding MGP_BALBcJ_T0050308.1 MGP_BALBcJ_G0024609.1 mouse_genomes_project 19 847250 849220 - MGP_BALBcJ_P0050308 BC021614 protein_coding protein_coding MGP_BALBcJ_T0050309.1 MGP_BALBcJ_G0024609.1 mouse_genomes_project 19 847251 849069 - MGP_BALBcJ_P0050309 BC021614 protein_coding protein_coding MGP_BALBcJ_T0051379.1 MGP_BALBcJ_G0024982.1 mouse_genomes_project 19 23962778 23965620 + MGP_BALBcJ_P0051379 Gm815 protein_coding protein_coding MGP_BALBcJ_T0051356.1 MGP_BALBcJ_G0024978.1 mouse_genomes_project 19 22557333 22659460 + MGP_BALBcJ_P0051356 Dmrt1 protein_coding protein_coding MGP_BALBcJ_T0051357.1 MGP_BALBcJ_G0024978.1 mouse_genomes_project 19 22557421 22658624 + MGP_BALBcJ_P0051357 Dmrt1 protein_coding protein_coding MGP_BALBcJ_T0051358.1 MGP_BALBcJ_G0024978.1 mouse_genomes_project 19 22557422 22614124 + Dmrt1 protein_coding processed_transcript MGP_BALBcJ_T0050530.1 MGP_BALBcJ_G0024683.1 mouse_genomes_project 19 2433285 2434852 + MGP_BALBcJ_P0050530 Rnaseh2c protein_coding protein_coding MGP_BALBcJ_T0050531.1 MGP_BALBcJ_G0024683.1 mouse_genomes_project 19 2433299 2434280 + Rnaseh2c protein_coding retained_intron MGP_BALBcJ_T0050532.1 MGP_BALBcJ_G0024683.1 mouse_genomes_project 19 2433387 2434345 + Rnaseh2c protein_coding retained_intron MGP_BALBcJ_T0050533.1 MGP_BALBcJ_G0024683.1 mouse_genomes_project 19 2433647 2434351 + MGP_BALBcJ_P0050533 Rnaseh2c protein_coding protein_coding MGP_BALBcJ_T0050534.1 MGP_BALBcJ_G0024683.1 mouse_genomes_project 19 2433822 2434347 + Rnaseh2c protein_coding retained_intron MGP_BALBcJ_T0051318.1 MGP_BALBcJ_G0024956.1 mouse_genomes_project 19 18636532 18668258 + MGP_BALBcJ_P0051318 Abhd17b protein_coding protein_coding MGP_BALBcJ_T0050557.1 MGP_BALBcJ_G0024691.1 mouse_genomes_project 19 2563245 2564812 - MGP_BALBcJ_P0050557 Fam89b protein_coding protein_coding MGP_BALBcJ_T0050558.1 MGP_BALBcJ_G0024691.1 mouse_genomes_project 19 2563245 2564810 - MGP_BALBcJ_P0050558 Fam89b protein_coding protein_coding MGP_BALBcJ_T0050559.1 MGP_BALBcJ_G0024691.1 mouse_genomes_project 19 2563245 2564792 - MGP_BALBcJ_P0050559 Fam89b protein_coding protein_coding MGP_BALBcJ_T0051044.1 MGP_BALBcJ_G0024820.1 mouse_genomes_project 19 7459418 7483862 + MGP_BALBcJ_P0051044 Ddb1 protein_coding protein_coding MGP_BALBcJ_T0050715.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227205 3241708 + MGP_BALBcJ_P0050715 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050716.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227234 3240881 + MGP_BALBcJ_P0050716 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050717.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227325 3240190 + MGP_BALBcJ_P0050717 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050718.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227437 3229471 + Sf1 protein_coding retained_intron MGP_BALBcJ_T0050719.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227437 3240874 + MGP_BALBcJ_P0050719 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050720.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227437 3240880 + MGP_BALBcJ_P0050720 Sf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050721.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227478 3232300 + Sf1 protein_coding retained_intron MGP_BALBcJ_T0050722.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3227709 3235703 + MGP_BALBcJ_P0050722 Sf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050723.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3228072 3236129 + MGP_BALBcJ_P0050723 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050724.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3233634 3235602 + Sf1 protein_coding processed_transcript MGP_BALBcJ_T0050725.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3234221 3235204 + Sf1 protein_coding retained_intron MGP_BALBcJ_T0050726.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3235922 3236431 + Sf1 protein_coding retained_intron MGP_BALBcJ_T0050727.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3237130 3240332 + MGP_BALBcJ_P0050727 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050728.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3237519 3240190 + MGP_BALBcJ_P0050728 Sf1 protein_coding protein_coding MGP_BALBcJ_T0050729.1 MGP_BALBcJ_G0024727.1 mouse_genomes_project 19 3237638 3239458 + MGP_BALBcJ_P0050729 Sf1 protein_coding protein_coding MGP_BALBcJ_T0017634.1 MGP_BALBcJ_G0015313.1 mouse_genomes_project 19 1243677 1252939 + A930001C03Rik processed_transcript processed_transcript MGP_BALBcJ_T0017635.1 MGP_BALBcJ_G0015313.1 mouse_genomes_project 19 1244232 1252796 + A930001C03Rik processed_transcript processed_transcript MGP_BALBcJ_T0017636.1 MGP_BALBcJ_G0015313.1 mouse_genomes_project 19 1248336 1252476 + A930001C03Rik processed_transcript processed_transcript MGP_BALBcJ_T0017637.1 MGP_BALBcJ_G0015313.1 mouse_genomes_project 19 1251425 1252945 + A930001C03Rik processed_transcript retained_intron MGP_BALBcJ_T0051239.1 MGP_BALBcJ_G0024922.1 mouse_genomes_project 19 10687679 10688746 + MGP_BALBcJ_P0051239 Olfr1496 protein_coding protein_coding MGP_BALBcJ_T0051466.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27141158 27169800 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0051467.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27141158 27192514 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0051468.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27141158 27204720 + MGP_BALBcJ_P0051468 Uhrf2 protein_coding protein_coding MGP_BALBcJ_T0051469.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27141234 27168151 + MGP_BALBcJ_P0051469 Uhrf2 protein_coding protein_coding MGP_BALBcJ_T0051470.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27184770 27186518 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0051471.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27189498 27191240 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0051472.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27196695 27198318 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0051473.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27200057 27204720 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0051474.1 MGP_BALBcJ_G0025007.1 mouse_genomes_project 19 27202958 27203937 + Uhrf2 protein_coding retained_intron MGP_BALBcJ_T0098560.1 MGP_BALBcJ_G0036614.1 mouse_genomes_project 19 4147461 4147582 + Gm23997 rRNA rRNA MGP_BALBcJ_T0050974.1 MGP_BALBcJ_G0024791.1 mouse_genomes_project 19 5989450 5991425 - MGP_BALBcJ_P0050974 Rom1 protein_coding protein_coding MGP_BALBcJ_T0051228.1 MGP_BALBcJ_G0024911.1 mouse_genomes_project 19 10299430 10300443 + MGP_BALBcJ_P0051228 Olfr1471 protein_coding protein_coding MGP_BALBcJ_T0003864.1 MGP_BALBcJ_G0003459.1 mouse_genomes_project 19 56919337 56921245 - Gm29261 antisense antisense MGP_BALBcJ_T0051034.1 MGP_BALBcJ_G0024815.1 mouse_genomes_project 19 7378281 7401348 + MGP_BALBcJ_P0051034 Cpsf7 protein_coding protein_coding MGP_BALBcJ_T0001009.1 MGP_BALBcJ_G0000937.1 mouse_genomes_project 19 1570957 1574026 - TEC TEC MGP_BALBcJ_T0013368.1 MGP_BALBcJ_G0011465.1 mouse_genomes_project 19 25855586 25855856 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017617.1 MGP_BALBcJ_G0015311.1 mouse_genomes_project 19 559269 636200 - Gm16066 processed_transcript processed_transcript MGP_BALBcJ_T0051986.1 MGP_BALBcJ_G0025183.1 mouse_genomes_project 19 44050944 44075062 + MGP_BALBcJ_P0051986 Sfxn2 protein_coding protein_coding MGP_BALBcJ_T0051333.1 MGP_BALBcJ_G0024964.1 mouse_genomes_project 19 20704501 20738854 + MGP_BALBcJ_P0051333 Ptar1 protein_coding protein_coding MGP_BALBcJ_T0051045.1 MGP_BALBcJ_G0024821.1 mouse_genomes_project 19 7488386 7521960 + MGP_BALBcJ_P0051045 Vwce protein_coding protein_coding MGP_BALBcJ_T0051388.1 MGP_BALBcJ_G0024984.1 mouse_genomes_project 19 24400857 24415809 + MGP_BALBcJ_P0051388 Kcnv2 protein_coding protein_coding MGP_BALBcJ_T0051349.1 MGP_BALBcJ_G0024974.1 mouse_genomes_project 19 21938594 21940939 - MGP_BALBcJ_P0051349 Foxd4 protein_coding protein_coding MGP_BALBcJ_T0100911.1 MGP_BALBcJ_G0038947.1 mouse_genomes_project 19 32473429 32473561 + Gm24006 snoRNA snoRNA MGP_BALBcJ_T0051169.1 MGP_BALBcJ_G0024867.1 mouse_genomes_project 19 8924941 8925874 - MGP_BALBcJ_P0051169 Olfr1423 protein_coding protein_coding MGP_BALBcJ_T0051872.1 MGP_BALBcJ_G0025150.1 mouse_genomes_project 19 42452962 42454391 - MGP_BALBcJ_P0051872 Mrpl43 protein_coding protein_coding MGP_BALBcJ_T0050874.1 MGP_BALBcJ_G0024765.1 mouse_genomes_project 19 4653942 4675480 - MGP_BALBcJ_P0050874 Slc22a26 protein_coding protein_coding MGP_BALBcJ_T0050875.1 MGP_BALBcJ_G0024765.1 mouse_genomes_project 19 4654881 4675569 - MGP_BALBcJ_P0050875 Slc22a26 protein_coding protein_coding MGP_BALBcJ_T0007056.1 MGP_BALBcJ_G0005792.1 mouse_genomes_project 19 25165104 25166013 + Gm28228 lincRNA lincRNA MGP_BALBcJ_T0050251.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635553 678945 + MGP_BALBcJ_P0050251 Chka protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050252.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635577 678949 + MGP_BALBcJ_P0050252 Chka protein_coding protein_coding MGP_BALBcJ_T0050253.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635590 656489 + Chka protein_coding retained_intron MGP_BALBcJ_T0050254.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635590 678947 + Chka protein_coding retained_intron MGP_BALBcJ_T0050255.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635612 651601 + Chka protein_coding retained_intron MGP_BALBcJ_T0050256.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635612 663190 + Chka protein_coding retained_intron MGP_BALBcJ_T0050257.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635856 678944 + MGP_BALBcJ_P0050257 Chka protein_coding protein_coding MGP_BALBcJ_T0050258.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 635881 670444 + MGP_BALBcJ_P0050258 Chka protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050259.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 636143 672030 + MGP_BALBcJ_P0050259 Chka protein_coding protein_coding MGP_BALBcJ_T0050260.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 659239 674514 + MGP_BALBcJ_P0050260 Chka protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050261.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 659940 669165 + Chka protein_coding processed_transcript MGP_BALBcJ_T0050262.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 659954 669118 + Chka protein_coding retained_intron MGP_BALBcJ_T0050263.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 659980 670996 + Chka protein_coding processed_transcript MGP_BALBcJ_T0050264.1 MGP_BALBcJ_G0024595.1 mouse_genomes_project 19 676310 678237 + Chka protein_coding retained_intron MGP_BALBcJ_T0051273.1 MGP_BALBcJ_G0024941.1 mouse_genomes_project 19 14412980 14826220 - MGP_BALBcJ_P0051273 Pcsk5 protein_coding protein_coding MGP_BALBcJ_T0051274.1 MGP_BALBcJ_G0024941.1 mouse_genomes_project 19 14542832 14825744 - MGP_BALBcJ_P0051274 Pcsk5 protein_coding protein_coding MGP_BALBcJ_T0050452.1 MGP_BALBcJ_G0024650.1 mouse_genomes_project 19 1797748 1803365 - MGP_BALBcJ_P0050452 Npas4 protein_coding protein_coding MGP_BALBcJ_T0050466.1 MGP_BALBcJ_G0024659.1 mouse_genomes_project 19 1920128 1927919 - MGP_BALBcJ_P0050466 Rab1b protein_coding protein_coding MGP_BALBcJ_T0010294.1 MGP_BALBcJ_G0008419.1 mouse_genomes_project 19 38961466 38961605 + Mir8091 miRNA miRNA MGP_BALBcJ_T0051998.1 MGP_BALBcJ_G0025188.1 mouse_genomes_project 19 44242689 44360619 + MGP_BALBcJ_P0051998 Cnnm2 protein_coding protein_coding MGP_BALBcJ_T0051999.1 MGP_BALBcJ_G0025188.1 mouse_genomes_project 19 44242689 44360619 + MGP_BALBcJ_P0051999 Cnnm2 protein_coding protein_coding MGP_BALBcJ_T0051380.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24294320 24327468 + Vldlr protein_coding retained_intron MGP_BALBcJ_T0051381.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24294856 24312693 + MGP_BALBcJ_P0051381 Vldlr protein_coding protein_coding MGP_BALBcJ_T0051382.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24294856 24327575 + MGP_BALBcJ_P0051382 Vldlr protein_coding protein_coding MGP_BALBcJ_T0051383.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24295193 24309607 + Vldlr protein_coding processed_transcript MGP_BALBcJ_T0051384.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24295193 24331944 + MGP_BALBcJ_P0051384 Vldlr protein_coding protein_coding MGP_BALBcJ_T0051385.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24295193 24327440 + MGP_BALBcJ_P0051385 Vldlr protein_coding protein_coding MGP_BALBcJ_T0051386.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24295294 24327476 + MGP_BALBcJ_P0051386 Vldlr protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051387.1 MGP_BALBcJ_G0024983.1 mouse_genomes_project 19 24316610 24321541 + MGP_BALBcJ_P0051387 Vldlr protein_coding protein_coding MGP_BALBcJ_T0050871.1 MGP_BALBcJ_G0024764.1 mouse_genomes_project 19 4562620 4596963 - MGP_BALBcJ_P0050871 Slc22a19 protein_coding protein_coding MGP_BALBcJ_T0050872.1 MGP_BALBcJ_G0024764.1 mouse_genomes_project 19 4566078 4596932 - Slc22a19 protein_coding retained_intron MGP_BALBcJ_T0050873.1 MGP_BALBcJ_G0024764.1 mouse_genomes_project 19 4592341 4596963 - Slc22a19 protein_coding retained_intron MGP_BALBcJ_T0003838.1 MGP_BALBcJ_G0003439.1 mouse_genomes_project 19 4185170 4192037 + Gm17227 antisense antisense MGP_BALBcJ_T0003839.1 MGP_BALBcJ_G0003439.1 mouse_genomes_project 19 4185246 4191859 + Gm17227 antisense antisense MGP_BALBcJ_T0100896.1 MGP_BALBcJ_G0038932.1 mouse_genomes_project 19 5779566 5779631 + Gm22744 snoRNA snoRNA MGP_BALBcJ_T0010263.1 MGP_BALBcJ_G0008388.1 mouse_genomes_project 19 2026818 2026924 - Gm27468 miRNA miRNA MGP_BALBcJ_T0051603.1 MGP_BALBcJ_G0025058.1 mouse_genomes_project 19 35003945 35007667 + MGP_BALBcJ_P0051603 Cyp26a1 protein_coding protein_coding MGP_BALBcJ_T0011449.1 MGP_BALBcJ_G0009574.1 mouse_genomes_project 19 2633965 2634051 - Gm27694 misc_RNA misc_RNA MGP_BALBcJ_T0050939.1 MGP_BALBcJ_G0024779.1 mouse_genomes_project 19 5866259 5876630 - MGP_BALBcJ_P0050939 Ttc9c protein_coding protein_coding MGP_BALBcJ_T0050940.1 MGP_BALBcJ_G0024779.1 mouse_genomes_project 19 5868319 5876221 - MGP_BALBcJ_P0050940 Ttc9c protein_coding protein_coding MGP_BALBcJ_T0050941.1 MGP_BALBcJ_G0024779.1 mouse_genomes_project 19 5868479 5876591 - MGP_BALBcJ_P0050941 Ttc9c protein_coding protein_coding MGP_BALBcJ_T0050942.1 MGP_BALBcJ_G0024779.1 mouse_genomes_project 19 5875593 5876529 - Ttc9c protein_coding retained_intron MGP_BALBcJ_T0052012.1 MGP_BALBcJ_G0025197.1 mouse_genomes_project 19 44644983 44650851 - MGP_BALBcJ_P0052012 Calhm3 protein_coding protein_coding MGP_BALBcJ_T0051888.1 MGP_BALBcJ_G0025158.1 mouse_genomes_project 19 42812387 42986624 + MGP_BALBcJ_P0051888 Btrc protein_coding protein_coding MGP_BALBcJ_T0051889.1 MGP_BALBcJ_G0025158.1 mouse_genomes_project 19 42812387 42986624 + MGP_BALBcJ_P0051889 Btrc protein_coding protein_coding MGP_BALBcJ_T0051890.1 MGP_BALBcJ_G0025158.1 mouse_genomes_project 19 42812492 42983240 + MGP_BALBcJ_P0051890 Btrc protein_coding unknown_likely_coding MGP_BALBcJ_T0052256.1 MGP_BALBcJ_G0025272.1 mouse_genomes_project 19 58887731 58888546 - MGP_BALBcJ_P0052256 protein_coding protein_coding MGP_BALBcJ_T0050234.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528085 580395 + MGP_BALBcJ_P0050234 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050235.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528085 578483 + MGP_BALBcJ_P0050235 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050236.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528085 580394 + MGP_BALBcJ_P0050236 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050237.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528085 578483 + MGP_BALBcJ_P0050237 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050238.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528085 570906 + MGP_BALBcJ_P0050238 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050239.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528187 568401 + MGP_BALBcJ_P0050239 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050240.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528697 570912 + MGP_BALBcJ_P0050240 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050241.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528782 567134 + MGP_BALBcJ_P0050241 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050242.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528798 543335 + Suv420h1 protein_coding retained_intron MGP_BALBcJ_T0050243.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528813 566579 + MGP_BALBcJ_P0050243 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050244.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528830 578780 + MGP_BALBcJ_P0050244 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050245.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528833 553822 + MGP_BALBcJ_P0050245 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050246.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528882 570884 + MGP_BALBcJ_P0050246 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050247.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 528897 553840 + MGP_BALBcJ_P0050247 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050248.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 529211 557315 + MGP_BALBcJ_P0050248 Suv420h1 protein_coding protein_coding MGP_BALBcJ_T0050249.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 552374 560196 + Suv420h1 protein_coding retained_intron MGP_BALBcJ_T0050250.1 MGP_BALBcJ_G0024594.1 mouse_genomes_project 19 566470 569479 + Suv420h1 protein_coding retained_intron MGP_BALBcJ_T0100891.1 MGP_BALBcJ_G0038927.1 mouse_genomes_project 19 868345 868560 - Gm23927 snoRNA snoRNA MGP_BALBcJ_T0051502.1 MGP_BALBcJ_G0025017.1 mouse_genomes_project 19 29763329 29811605 + MGP_BALBcJ_P0051502 Papss2 protein_coding protein_coding MGP_BALBcJ_T0051503.1 MGP_BALBcJ_G0025017.1 mouse_genomes_project 19 29763496 29811612 + MGP_BALBcJ_P0051503 Papss2 protein_coding unknown_likely_coding MGP_BALBcJ_T0052161.1 MGP_BALBcJ_G0025241.1 mouse_genomes_project 19 54501516 54539125 + MGP_BALBcJ_P0052161 Vwa2 protein_coding protein_coding MGP_BALBcJ_T0052000.1 MGP_BALBcJ_G0025189.1 mouse_genomes_project 19 44368654 44451491 - MGP_BALBcJ_P0052000 Nt5c2 protein_coding protein_coding MGP_BALBcJ_T0052001.1 MGP_BALBcJ_G0025189.1 mouse_genomes_project 19 44368654 44444260 - MGP_BALBcJ_P0052001 Nt5c2 protein_coding protein_coding MGP_BALBcJ_T0052002.1 MGP_BALBcJ_G0025189.1 mouse_genomes_project 19 44369651 44497740 - MGP_BALBcJ_P0052002 Nt5c2 protein_coding protein_coding MGP_BALBcJ_T0052003.1 MGP_BALBcJ_G0025189.1 mouse_genomes_project 19 44373338 44380352 - MGP_BALBcJ_P0052003 Nt5c2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051421.1 MGP_BALBcJ_G0024992.1 mouse_genomes_project 19 26113772 26141275 - MGP_BALBcJ_P0051421 Ak3 protein_coding protein_coding MGP_BALBcJ_T0051422.1 MGP_BALBcJ_G0024992.1 mouse_genomes_project 19 26118840 26120184 - MGP_BALBcJ_P0051422 Ak3 protein_coding protein_coding MGP_BALBcJ_T0051501.1 MGP_BALBcJ_G0025016.1 mouse_genomes_project 19 29621832 29651179 + MGP_BALBcJ_P0051501 Minpp1 protein_coding protein_coding MGP_BALBcJ_T0051699.1 MGP_BALBcJ_G0025089.1 mouse_genomes_project 19 38402074 38431825 + MGP_BALBcJ_P0051699 Dntt protein_coding protein_coding MGP_BALBcJ_T0051700.1 MGP_BALBcJ_G0025089.1 mouse_genomes_project 19 38402074 38431825 + MGP_BALBcJ_P0051700 Dntt protein_coding protein_coding MGP_BALBcJ_T0017643.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5777346 5780918 + Snhg1 processed_transcript lincRNA MGP_BALBcJ_T0017644.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5777358 5780917 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017645.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5777358 5780916 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017646.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778479 5780918 + Snhg1 processed_transcript lincRNA MGP_BALBcJ_T0017647.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778605 5780367 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017648.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778614 5779327 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017649.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778621 5780820 + Snhg1 processed_transcript lincRNA MGP_BALBcJ_T0017650.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778632 5780918 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017651.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778636 5779816 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017652.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778830 5779778 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017653.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778867 5780310 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017654.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5778877 5779997 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017655.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5779137 5780918 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017656.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5779371 5780918 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017657.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5779496 5780477 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017658.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5779578 5780918 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017659.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5779949 5780918 + Snhg1 processed_transcript retained_intron MGP_BALBcJ_T0017660.1 MGP_BALBcJ_G0015318.1 mouse_genomes_project 19 5779974 5780918 + Snhg1 processed_transcript lincRNA MGP_BALBcJ_T0052149.1 MGP_BALBcJ_G0025237.1 mouse_genomes_project 19 54173778 54223894 + MGP_BALBcJ_P0052149 Nhlrc2 protein_coding protein_coding MGP_BALBcJ_T0050284.1 MGP_BALBcJ_G0024600.1 mouse_genomes_project 19 746281 760359 + MGP_BALBcJ_P0050284 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050285.1 MGP_BALBcJ_G0024600.1 mouse_genomes_project 19 754227 758695 + MGP_BALBcJ_P0050285 protein_coding protein_coding MGP_BALBcJ_T0052103.1 MGP_BALBcJ_G0025230.1 mouse_genomes_project 19 52927148 53247269 + MGP_BALBcJ_P0052103 Vti1a protein_coding protein_coding MGP_BALBcJ_T0052104.1 MGP_BALBcJ_G0025230.1 mouse_genomes_project 19 52927248 53244622 + MGP_BALBcJ_P0052104 Vti1a protein_coding unknown_likely_coding MGP_BALBcJ_T0050287.1 MGP_BALBcJ_G0024602.1 mouse_genomes_project 19 776630 779932 + MGP_BALBcJ_P0050287 Acy3 protein_coding unknown_likely_coding MGP_BALBcJ_T0051182.1 MGP_BALBcJ_G0024880.1 mouse_genomes_project 19 9297095 9301524 + MGP_BALBcJ_P0051182 Mpeg1 protein_coding protein_coding MGP_BALBcJ_T0051599.1 MGP_BALBcJ_G0025054.1 mouse_genomes_project 19 34678317 34726148 + MGP_BALBcJ_P0051599 Kif11 protein_coding protein_coding MGP_BALBcJ_T0050451.1 MGP_BALBcJ_G0024649.1 mouse_genomes_project 19 1775537 1780231 + MGP_BALBcJ_P0050451 Mrpl11 protein_coding protein_coding MGP_BALBcJ_T0051847.1 MGP_BALBcJ_G0025142.1 mouse_genomes_project 19 41934141 41955185 + MGP_BALBcJ_P0051847 Wnt8b protein_coding protein_coding MGP_BALBcJ_T0051361.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23678389 23856222 + MGP_BALBcJ_P0051361 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051362.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23678393 23856176 + MGP_BALBcJ_P0051362 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051363.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23680639 23856227 + MGP_BALBcJ_P0051363 Smarca2 protein_coding unknown_likely_coding MGP_BALBcJ_T0051364.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23696764 23704598 + MGP_BALBcJ_P0051364 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051365.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23744419 23752215 + Smarca2 protein_coding retained_intron MGP_BALBcJ_T0051366.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23754645 23829867 + Smarca2 protein_coding processed_transcript MGP_BALBcJ_T0051367.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23794277 23849661 + Smarca2 protein_coding retained_intron MGP_BALBcJ_T0051368.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23800110 23829907 + Smarca2 protein_coding processed_transcript MGP_BALBcJ_T0051369.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23826190 23855376 + MGP_BALBcJ_P0051369 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051370.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23826344 23855270 + MGP_BALBcJ_P0051370 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051371.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23826379 23854142 + MGP_BALBcJ_P0051371 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051372.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23826380 23855270 + MGP_BALBcJ_P0051372 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051373.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23826380 23856174 + MGP_BALBcJ_P0051373 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051374.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23827681 23852205 + MGP_BALBcJ_P0051374 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051375.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23828894 23848903 + MGP_BALBcJ_P0051375 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051376.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23829879 23856222 + MGP_BALBcJ_P0051376 Smarca2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051377.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23831508 23855551 + MGP_BALBcJ_P0051377 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0051378.1 MGP_BALBcJ_G0024981.1 mouse_genomes_project 19 23848406 23855332 + MGP_BALBcJ_P0051378 Smarca2 protein_coding protein_coding MGP_BALBcJ_T0050397.1 MGP_BALBcJ_G0024629.1 mouse_genomes_project 19 1221658 1244106 - MGP_BALBcJ_P0050397 Rhod protein_coding protein_coding MGP_BALBcJ_T0050398.1 MGP_BALBcJ_G0024629.1 mouse_genomes_project 19 1221866 1244095 - MGP_BALBcJ_P0050398 Rhod protein_coding protein_coding MGP_BALBcJ_T0050399.1 MGP_BALBcJ_G0024629.1 mouse_genomes_project 19 1222426 1222755 - Rhod protein_coding processed_transcript MGP_BALBcJ_T0052083.1 MGP_BALBcJ_G0025220.1 mouse_genomes_project 19 51270197 51469156 + MGP_BALBcJ_P0052083 Rbm20 protein_coding protein_coding MGP_BALBcJ_T0052084.1 MGP_BALBcJ_G0025220.1 mouse_genomes_project 19 51270197 51445964 + MGP_BALBcJ_P0052084 Rbm20 protein_coding protein_coding MGP_BALBcJ_T0052085.1 MGP_BALBcJ_G0025220.1 mouse_genomes_project 19 51394833 51414962 + Rbm20 protein_coding processed_transcript MGP_BALBcJ_T0052086.1 MGP_BALBcJ_G0025220.1 mouse_genomes_project 19 51445410 51469156 + MGP_BALBcJ_P0052086 Rbm20 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051224.1 MGP_BALBcJ_G0024907.1 mouse_genomes_project 19 10167607 10180612 - MGP_BALBcJ_P0051224 Olfr1465 protein_coding protein_coding MGP_BALBcJ_T0052234.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58501409 58524357 + MGP_BALBcJ_P0052234 Fam45a protein_coding protein_coding MGP_BALBcJ_T0052235.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58501436 58520601 + MGP_BALBcJ_P0052235 Fam45a protein_coding protein_coding MGP_BALBcJ_T0052236.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58501442 58525581 + MGP_BALBcJ_P0052236 Fam45a protein_coding protein_coding MGP_BALBcJ_T0052237.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58501447 58508101 + Fam45a protein_coding retained_intron MGP_BALBcJ_T0052238.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58501462 58512203 + MGP_BALBcJ_P0052238 Fam45a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052239.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58501882 58504435 + Fam45a protein_coding processed_transcript MGP_BALBcJ_T0052240.1 MGP_BALBcJ_G0025267.1 mouse_genomes_project 19 58520286 58524468 + Fam45a protein_coding retained_intron MGP_BALBcJ_T0017674.1 MGP_BALBcJ_G0015324.1 mouse_genomes_project 19 23846716 23901910 - 4931403E22Rik processed_transcript processed_transcript MGP_BALBcJ_T0007071.1 MGP_BALBcJ_G0005802.1 mouse_genomes_project 19 37955265 37961485 + Gm27042 lincRNA lincRNA MGP_BALBcJ_T0051395.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25332325 25763908 - MGP_BALBcJ_P0051395 Glis3 protein_coding protein_coding MGP_BALBcJ_T0051396.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25335821 25405595 - Glis3 protein_coding processed_transcript MGP_BALBcJ_T0051397.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25335838 25763497 - MGP_BALBcJ_P0051397 Glis3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051398.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25335900 25379528 - Glis3 protein_coding processed_transcript MGP_BALBcJ_T0051399.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25336447 25622532 - Glis3 protein_coding retained_intron MGP_BALBcJ_T0051400.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25337425 25362405 - Glis3 protein_coding retained_intron MGP_BALBcJ_T0051401.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25429220 25763908 - MGP_BALBcJ_P0051401 Glis3 protein_coding protein_coding MGP_BALBcJ_T0051402.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25613958 25762521 - MGP_BALBcJ_P0051402 Glis3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051403.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25613958 25750519 - MGP_BALBcJ_P0051403 Glis3 protein_coding protein_coding MGP_BALBcJ_T0051404.1 MGP_BALBcJ_G0024987.1 mouse_genomes_project 19 25613958 25762521 - MGP_BALBcJ_P0051404 Glis3 protein_coding protein_coding MGP_BALBcJ_T0051520.1 MGP_BALBcJ_G0025026.1 mouse_genomes_project 19 31353833 31372454 + MGP_BALBcJ_P0051520 Lipm protein_coding protein_coding MGP_BALBcJ_T0051607.1 MGP_BALBcJ_G0025060.1 mouse_genomes_project 19 35331201 35383484 + MGP_BALBcJ_P0051607 Cep55 protein_coding protein_coding MGP_BALBcJ_T0051608.1 MGP_BALBcJ_G0025060.1 mouse_genomes_project 19 35331216 35382557 + MGP_BALBcJ_P0051608 Cep55 protein_coding protein_coding MGP_BALBcJ_T0051609.1 MGP_BALBcJ_G0025060.1 mouse_genomes_project 19 35331218 35383484 + MGP_BALBcJ_P0051609 Cep55 protein_coding protein_coding MGP_BALBcJ_T0050983.1 MGP_BALBcJ_G0024795.1 mouse_genomes_project 19 6029680 6041402 + MGP_BALBcJ_P0050983 Eef1g protein_coding protein_coding MGP_BALBcJ_T0050984.1 MGP_BALBcJ_G0024795.1 mouse_genomes_project 19 6030209 6035168 + Eef1g protein_coding processed_transcript MGP_BALBcJ_T0050985.1 MGP_BALBcJ_G0024795.1 mouse_genomes_project 19 6030858 6035288 + Eef1g protein_coding processed_transcript MGP_BALBcJ_T0050986.1 MGP_BALBcJ_G0024795.1 mouse_genomes_project 19 6030858 6032840 + Eef1g protein_coding retained_intron MGP_BALBcJ_T0050987.1 MGP_BALBcJ_G0024795.1 mouse_genomes_project 19 6030858 6032145 + Eef1g protein_coding retained_intron MGP_BALBcJ_T0050988.1 MGP_BALBcJ_G0024795.1 mouse_genomes_project 19 6035055 6041402 + Eef1g protein_coding retained_intron MGP_BALBcJ_T0003858.1 MGP_BALBcJ_G0003453.1 mouse_genomes_project 19 43206607 43215113 + antisense antisense MGP_BALBcJ_T0052080.1 MGP_BALBcJ_G0025219.1 mouse_genomes_project 19 51190958 51238379 + MGP_BALBcJ_P0052080 Smc3 protein_coding protein_coding MGP_BALBcJ_T0052081.1 MGP_BALBcJ_G0025219.1 mouse_genomes_project 19 51228239 51229268 + Smc3 protein_coding retained_intron MGP_BALBcJ_T0052082.1 MGP_BALBcJ_G0025219.1 mouse_genomes_project 19 51235903 51237354 + Smc3 protein_coding retained_intron MGP_BALBcJ_T0050360.1 MGP_BALBcJ_G0024622.1 mouse_genomes_project 19 987733 994139 - MGP_BALBcJ_P0050360 Rad9a protein_coding protein_coding MGP_BALBcJ_T0051249.1 MGP_BALBcJ_G0024931.1 mouse_genomes_project 19 12137400 12140111 - MGP_BALBcJ_P0051249 protein_coding protein_coding MGP_BALBcJ_T0050670.1 MGP_BALBcJ_G0024722.1 mouse_genomes_project 19 3103300 3123000 + MGP_BALBcJ_P0050670 Atg2a protein_coding protein_coding MGP_BALBcJ_T0050671.1 MGP_BALBcJ_G0024722.1 mouse_genomes_project 19 3107097 3122960 + MGP_BALBcJ_P0050671 Atg2a protein_coding protein_coding MGP_BALBcJ_T0050672.1 MGP_BALBcJ_G0024722.1 mouse_genomes_project 19 3112152 3112960 + Atg2a protein_coding retained_intron MGP_BALBcJ_T0050673.1 MGP_BALBcJ_G0024722.1 mouse_genomes_project 19 3117035 3120284 + Atg2a protein_coding retained_intron MGP_BALBcJ_T0050674.1 MGP_BALBcJ_G0024722.1 mouse_genomes_project 19 3119005 3120797 + Atg2a protein_coding retained_intron MGP_BALBcJ_T0051779.1 MGP_BALBcJ_G0025119.1 mouse_genomes_project 19 40120302 40150068 - MGP_BALBcJ_P0051779 Pyroxd2 protein_coding protein_coding MGP_BALBcJ_T0051836.1 MGP_BALBcJ_G0025135.1 mouse_genomes_project 19 41528150 41555212 - MGP_BALBcJ_P0051836 Cwf19l1 protein_coding protein_coding MGP_BALBcJ_T0050233.1 MGP_BALBcJ_G0024593.1 mouse_genomes_project 19 468177 477726 + MGP_BALBcJ_P0050233 1810055G02Rik protein_coding protein_coding MGP_BALBcJ_T0051158.1 MGP_BALBcJ_G0024858.1 mouse_genomes_project 19 8626260 8642085 + MGP_BALBcJ_P0051158 Gif protein_coding protein_coding MGP_BALBcJ_T0051892.1 MGP_BALBcJ_G0025160.1 mouse_genomes_project 19 43014970 43033024 + MGP_BALBcJ_P0051892 Gm17018 protein_coding protein_coding MGP_BALBcJ_T0051894.1 MGP_BALBcJ_G0025160.1 mouse_genomes_project 19 43033021 43034508 + Gm17018 protein_coding antisense MGP_BALBcJ_T0050400.1 MGP_BALBcJ_G0024630.1 mouse_genomes_project 19 1250504 1282081 - MGP_BALBcJ_P0050400 Syt12 protein_coding protein_coding MGP_BALBcJ_T0050401.1 MGP_BALBcJ_G0024630.1 mouse_genomes_project 19 1252329 1256756 - Syt12 protein_coding processed_transcript MGP_BALBcJ_T0050402.1 MGP_BALBcJ_G0024630.1 mouse_genomes_project 19 1261686 1281760 - MGP_BALBcJ_P0050402 Syt12 protein_coding protein_coding MGP_BALBcJ_T0050403.1 MGP_BALBcJ_G0024630.1 mouse_genomes_project 19 1270843 1281790 - Syt12 protein_coding retained_intron MGP_BALBcJ_T0098352.1 MGP_BALBcJ_G0036406.1 mouse_genomes_project 19 10822453 10823250 + pseudogene pseudogene MGP_BALBcJ_T0051909.1 MGP_BALBcJ_G0025163.1 mouse_genomes_project 19 43205087 43206691 - MGP_BALBcJ_P0051909 Npm3 protein_coding protein_coding MGP_BALBcJ_T0051910.1 MGP_BALBcJ_G0025163.1 mouse_genomes_project 19 43205642 43206649 - Npm3 protein_coding retained_intron MGP_BALBcJ_T0102372.1 MGP_BALBcJ_G0040188.1 mouse_genomes_project 19 6458853 6471075 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0010305.1 MGP_BALBcJ_G0008430.1 mouse_genomes_project 19 47691903 47692028 + Gm27749 miRNA miRNA MGP_BALBcJ_T0050991.1 MGP_BALBcJ_G0024797.1 mouse_genomes_project 19 6147163 6151966 - MGP_BALBcJ_P0050991 Scgb1a1 protein_coding protein_coding MGP_BALBcJ_T0001010.1 MGP_BALBcJ_G0000938.1 mouse_genomes_project 19 2636906 2637359 + TEC TEC MGP_BALBcJ_T0003862.1 MGP_BALBcJ_G0003457.1 mouse_genomes_project 19 53993511 53995491 + Gm17197 antisense antisense MGP_BALBcJ_T0050347.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 947988 954448 - MGP_BALBcJ_P0050347 Rps6kb2 protein_coding protein_coding MGP_BALBcJ_T0050348.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 947994 954499 - MGP_BALBcJ_P0050348 Rps6kb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050349.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 947997 954519 - Rps6kb2 protein_coding retained_intron MGP_BALBcJ_T0050350.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 947997 949355 - Rps6kb2 protein_coding retained_intron MGP_BALBcJ_T0050351.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 947997 954503 - MGP_BALBcJ_P0050351 Rps6kb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050352.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 948188 953533 - Rps6kb2 protein_coding processed_transcript MGP_BALBcJ_T0050353.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 948188 954488 - MGP_BALBcJ_P0050353 Rps6kb2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050354.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 953462 954503 - Rps6kb2 protein_coding processed_transcript MGP_BALBcJ_T0050355.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 953719 954533 - Rps6kb2 protein_coding retained_intron MGP_BALBcJ_T0050356.1 MGP_BALBcJ_G0024618.1 mouse_genomes_project 19 954017 954557 - Rps6kb2 protein_coding processed_transcript MGP_BALBcJ_T0052221.1 MGP_BALBcJ_G0025260.1 mouse_genomes_project 19 57120076 57127027 + MGP_BALBcJ_P0052221 Emx2 protein_coding protein_coding MGP_BALBcJ_T0052222.1 MGP_BALBcJ_G0025260.1 mouse_genomes_project 19 57121224 57127023 + MGP_BALBcJ_P0052222 Emx2 protein_coding protein_coding MGP_BALBcJ_T0052223.1 MGP_BALBcJ_G0025260.1 mouse_genomes_project 19 57124466 57125876 + Emx2 protein_coding processed_transcript MGP_BALBcJ_T0051341.1 MGP_BALBcJ_G0024970.1 mouse_genomes_project 19 21327997 21476136 - MGP_BALBcJ_P0051341 Pip5k1b protein_coding unknown_likely_coding MGP_BALBcJ_T0051342.1 MGP_BALBcJ_G0024970.1 mouse_genomes_project 19 21472381 21595599 - Pip5k1b protein_coding processed_transcript MGP_BALBcJ_T0003842.1 MGP_BALBcJ_G0003442.1 mouse_genomes_project 19 8394094 8394837 - Gm19261 antisense antisense MGP_BALBcJ_T0051337.1 MGP_BALBcJ_G0024968.1 mouse_genomes_project 19 21110073 21252134 - MGP_BALBcJ_P0051337 Tjp2 protein_coding protein_coding MGP_BALBcJ_T0051241.1 MGP_BALBcJ_G0024924.1 mouse_genomes_project 19 10723011 10724063 - MGP_BALBcJ_P0051241 Olfr1499 protein_coding protein_coding MGP_BALBcJ_T0051338.1 MGP_BALBcJ_G0024969.1 mouse_genomes_project 19 21291352 21313315 - MGP_BALBcJ_P0051338 Fxn protein_coding protein_coding MGP_BALBcJ_T0051339.1 MGP_BALBcJ_G0024969.1 mouse_genomes_project 19 21291400 21313278 - MGP_BALBcJ_P0051339 Fxn protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051340.1 MGP_BALBcJ_G0024969.1 mouse_genomes_project 19 21291748 21310672 - Fxn protein_coding retained_intron MGP_BALBcJ_T0051235.1 MGP_BALBcJ_G0024918.1 mouse_genomes_project 19 10555263 10556214 + MGP_BALBcJ_P0051235 Olfr1490 protein_coding protein_coding MGP_BALBcJ_T0051532.1 MGP_BALBcJ_G0025032.1 mouse_genomes_project 19 31732401 31767438 - MGP_BALBcJ_P0051532 Lipa protein_coding protein_coding MGP_BALBcJ_T0051533.1 MGP_BALBcJ_G0025032.1 mouse_genomes_project 19 31732401 31767438 - MGP_BALBcJ_P0051533 Lipa protein_coding protein_coding MGP_BALBcJ_T0050368.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1063359 1075024 - MGP_BALBcJ_P0050368 Ankrd13d protein_coding protein_coding MGP_BALBcJ_T0050369.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1063359 1075984 - MGP_BALBcJ_P0050369 Ankrd13d protein_coding protein_coding MGP_BALBcJ_T0050370.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1063361 1075986 - MGP_BALBcJ_P0050370 Ankrd13d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050371.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1063577 1064474 - MGP_BALBcJ_P0050371 Ankrd13d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050372.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1065800 1073860 - MGP_BALBcJ_P0050372 Ankrd13d protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050373.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1072314 1075986 - Ankrd13d protein_coding processed_transcript MGP_BALBcJ_T0050374.1 MGP_BALBcJ_G0024626.1 mouse_genomes_project 19 1073494 1075882 - MGP_BALBcJ_P0050374 Ankrd13d protein_coding protein_coding MGP_BALBcJ_T0050499.1 MGP_BALBcJ_G0024675.1 mouse_genomes_project 19 2293639 2296897 - MGP_BALBcJ_P0050499 Ctsw protein_coding protein_coding MGP_BALBcJ_T0050943.1 MGP_BALBcJ_G0024780.1 mouse_genomes_project 19 5876697 5891757 + MGP_BALBcJ_P0050943 Hnrnpul2 protein_coding protein_coding MGP_BALBcJ_T0051389.1 MGP_BALBcJ_G0024985.1 mouse_genomes_project 19 24467210 24503174 - MGP_BALBcJ_P0051389 Pum3 protein_coding protein_coding MGP_BALBcJ_T0051332.1 MGP_BALBcJ_G0024963.1 mouse_genomes_project 19 20692976 20693719 + MGP_BALBcJ_P0051332 Gm6563 protein_coding protein_coding MGP_BALBcJ_T0052126.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53912646 53949813 + MGP_BALBcJ_P0052126 Habp2 protein_coding protein_coding MGP_BALBcJ_T0052127.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53913424 53950546 + MGP_BALBcJ_P0052127 Habp2 protein_coding protein_coding MGP_BALBcJ_T0052128.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53913438 53937732 + Habp2 protein_coding processed_transcript MGP_BALBcJ_T0052129.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53913498 53949359 + MGP_BALBcJ_P0052129 Habp2 protein_coding protein_coding MGP_BALBcJ_T0052130.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53913498 53946019 + MGP_BALBcJ_P0052130 Habp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052131.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53937557 53946141 + MGP_BALBcJ_P0052131 Habp2 protein_coding protein_coding MGP_BALBcJ_T0052132.1 MGP_BALBcJ_G0025232.1 mouse_genomes_project 19 53938691 53949353 + MGP_BALBcJ_P0052132 Habp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051288.1 MGP_BALBcJ_G0024947.1 mouse_genomes_project 19 15907786 15978937 - MGP_BALBcJ_P0051288 Rorb protein_coding protein_coding MGP_BALBcJ_T0051289.1 MGP_BALBcJ_G0024947.1 mouse_genomes_project 19 15915455 16087443 - MGP_BALBcJ_P0051289 Rorb protein_coding protein_coding MGP_BALBcJ_T0051290.1 MGP_BALBcJ_G0024947.1 mouse_genomes_project 19 15953513 15978920 - Rorb protein_coding retained_intron MGP_BALBcJ_T0051291.1 MGP_BALBcJ_G0024947.1 mouse_genomes_project 19 15953530 15978931 - Rorb protein_coding retained_intron MGP_BALBcJ_T0101881.1 MGP_BALBcJ_G0039782.1 mouse_genomes_project 19 56350904 56353313 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101882.1 MGP_BALBcJ_G0039782.1 mouse_genomes_project 19 56350904 56351319 + transcribed_unprocessed_pseudogene processed_transcript MGP_BALBcJ_T0101883.1 MGP_BALBcJ_G0039782.1 mouse_genomes_project 19 56351070 56368939 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_BALBcJ_T0050486.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2251295 2252415 - Drap1 protein_coding retained_intron MGP_BALBcJ_T0050487.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2251299 2252712 - Drap1 protein_coding retained_intron MGP_BALBcJ_T0050488.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2251318 2253279 - Drap1 protein_coding retained_intron MGP_BALBcJ_T0050489.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2251318 2253413 - MGP_BALBcJ_P0050489 Drap1 protein_coding protein_coding MGP_BALBcJ_T0050490.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2251352 2252573 - Drap1 protein_coding retained_intron MGP_BALBcJ_T0050491.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2251411 2253206 - MGP_BALBcJ_P0050491 Drap1 protein_coding protein_coding MGP_BALBcJ_T0050492.1 MGP_BALBcJ_G0024670.1 mouse_genomes_project 19 2252098 2253271 - Drap1 protein_coding retained_intron MGP_BALBcJ_T0050566.1 MGP_BALBcJ_G0024693.1 mouse_genomes_project 19 2576269 2593898 + MGP_BALBcJ_P0050566 Ltbp3 protein_coding protein_coding MGP_BALBcJ_T0013361.1 MGP_BALBcJ_G0011458.1 mouse_genomes_project 19 13238667 13239874 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0013381.1 MGP_BALBcJ_G0011478.1 mouse_genomes_project 19 58856253 58856590 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051664.1 MGP_BALBcJ_G0025082.1 mouse_genomes_project 19 37660189 37766810 - MGP_BALBcJ_P0051664 Sorbs1 protein_coding protein_coding MGP_BALBcJ_T0051665.1 MGP_BALBcJ_G0025082.1 mouse_genomes_project 19 37660189 37766810 - MGP_BALBcJ_P0051665 Sorbs1 protein_coding protein_coding MGP_BALBcJ_T0051666.1 MGP_BALBcJ_G0025082.1 mouse_genomes_project 19 37660189 37766810 - MGP_BALBcJ_P0051666 Sorbs1 protein_coding protein_coding MGP_BALBcJ_T0051667.1 MGP_BALBcJ_G0025082.1 mouse_genomes_project 19 37660189 37766810 - MGP_BALBcJ_P0051667 Sorbs1 protein_coding protein_coding MGP_BALBcJ_T0051668.1 MGP_BALBcJ_G0025082.1 mouse_genomes_project 19 37674626 37766810 - MGP_BALBcJ_P0051668 Sorbs1 protein_coding unknown_likely_coding MGP_BALBcJ_T0013373.1 MGP_BALBcJ_G0011470.1 mouse_genomes_project 19 38831554 38832416 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007072.1 MGP_BALBcJ_G0005803.1 mouse_genomes_project 19 38237809 38243815 + E030044B06Rik lincRNA lincRNA MGP_BALBcJ_T0100907.1 MGP_BALBcJ_G0038943.1 mouse_genomes_project 19 20660462 20660564 + Gm22144 snoRNA snoRNA MGP_BALBcJ_T0050366.1 MGP_BALBcJ_G0024625.1 mouse_genomes_project 19 1054897 1062352 - MGP_BALBcJ_P0050366 Ssh3 protein_coding protein_coding MGP_BALBcJ_T0050367.1 MGP_BALBcJ_G0024625.1 mouse_genomes_project 19 1054902 1062352 - MGP_BALBcJ_P0050367 Ssh3 protein_coding protein_coding MGP_BALBcJ_T0051460.1 MGP_BALBcJ_G0025005.1 mouse_genomes_project 19 27032184 27068020 + MGP_BALBcJ_P0051460 Il33 protein_coding protein_coding MGP_BALBcJ_T0051461.1 MGP_BALBcJ_G0025005.1 mouse_genomes_project 19 27032185 27059131 + MGP_BALBcJ_P0051461 Il33 protein_coding protein_coding MGP_BALBcJ_T0051462.1 MGP_BALBcJ_G0025005.1 mouse_genomes_project 19 27032202 27066277 + MGP_BALBcJ_P0051462 Il33 protein_coding protein_coding MGP_BALBcJ_T0051463.1 MGP_BALBcJ_G0025005.1 mouse_genomes_project 19 27052843 27068006 + MGP_BALBcJ_P0051463 Il33 protein_coding protein_coding MGP_BALBcJ_T0051464.1 MGP_BALBcJ_G0025005.1 mouse_genomes_project 19 27058869 27059867 + MGP_BALBcJ_P0051464 Il33 protein_coding protein_coding MGP_BALBcJ_T0051424.1 MGP_BALBcJ_G0024994.1 mouse_genomes_project 19 26351184 26412729 + MGP_BALBcJ_P0051424 Jak2 protein_coding protein_coding MGP_BALBcJ_T0051425.1 MGP_BALBcJ_G0024994.1 mouse_genomes_project 19 26351184 26412729 + MGP_BALBcJ_P0051425 Jak2 protein_coding protein_coding MGP_BALBcJ_T0013378.1 MGP_BALBcJ_G0011475.1 mouse_genomes_project 19 51368115 51368535 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050465.1 MGP_BALBcJ_G0024658.1 mouse_genomes_project 19 1913818 1919340 - MGP_BALBcJ_P0050465 Cnih2 protein_coding protein_coding MGP_BALBcJ_T0051932.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43513307 43530253 + Pprc1 protein_coding processed_transcript MGP_BALBcJ_T0051933.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43524670 43540886 + MGP_BALBcJ_P0051933 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051934.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43524712 43540890 + MGP_BALBcJ_P0051934 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051935.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43524715 43540884 + MGP_BALBcJ_P0051935 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051936.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43524963 43529514 + Pprc1 protein_coding processed_transcript MGP_BALBcJ_T0051937.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43524963 43530494 + MGP_BALBcJ_P0051937 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051938.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43524995 43530859 + MGP_BALBcJ_P0051938 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051939.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43525367 43530684 + MGP_BALBcJ_P0051939 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051940.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43525390 43530700 + MGP_BALBcJ_P0051940 Pprc1 protein_coding protein_coding MGP_BALBcJ_T0051941.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43532136 43540777 + Pprc1 protein_coding retained_intron MGP_BALBcJ_T0051942.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43535889 43537153 + Pprc1 protein_coding processed_transcript MGP_BALBcJ_T0051943.1 MGP_BALBcJ_G0025169.1 mouse_genomes_project 19 43539809 43540777 + Pprc1 protein_coding retained_intron MGP_BALBcJ_T0051405.1 MGP_BALBcJ_G0024988.1 mouse_genomes_project 19 25925324 25969273 + Slc1a1 protein_coding retained_intron MGP_BALBcJ_T0051406.1 MGP_BALBcJ_G0024988.1 mouse_genomes_project 19 25925349 26003740 + MGP_BALBcJ_P0051406 Slc1a1 protein_coding protein_coding MGP_BALBcJ_T0051407.1 MGP_BALBcJ_G0024988.1 mouse_genomes_project 19 25925410 25995768 + Slc1a1 protein_coding retained_intron MGP_BALBcJ_T0051408.1 MGP_BALBcJ_G0024988.1 mouse_genomes_project 19 25982946 26001657 + Slc1a1 protein_coding retained_intron MGP_BALBcJ_T0051410.1 MGP_BALBcJ_G0024988.1 mouse_genomes_project 19 25985717 26002418 + Slc1a1 protein_coding retained_intron MGP_BALBcJ_T0051098.1 MGP_BALBcJ_G0024839.1 mouse_genomes_project 19 8034602 8062191 - MGP_BALBcJ_P0051098 Ms4a13 protein_coding protein_coding MGP_BALBcJ_T0051099.1 MGP_BALBcJ_G0024839.1 mouse_genomes_project 19 8034603 8062205 - MGP_BALBcJ_P0051099 Ms4a13 protein_coding protein_coding MGP_BALBcJ_T0050877.1 MGP_BALBcJ_G0024767.1 mouse_genomes_project 19 4998584 5125470 - MGP_BALBcJ_P0050877 protein_coding protein_coding MGP_BALBcJ_T0050773.1 MGP_BALBcJ_G0024731.1 mouse_genomes_project 19 3401970 3409139 - MGP_BALBcJ_P0050773 Slc22a12 protein_coding protein_coding MGP_BALBcJ_T0050774.1 MGP_BALBcJ_G0024731.1 mouse_genomes_project 19 3402184 3407669 - Slc22a12 protein_coding processed_transcript MGP_BALBcJ_T0050775.1 MGP_BALBcJ_G0024731.1 mouse_genomes_project 19 3403856 3408831 - MGP_BALBcJ_P0050775 Slc22a12 protein_coding protein_coding MGP_BALBcJ_T0007099.1 MGP_BALBcJ_G0005822.1 mouse_genomes_project 19 57907148 57908876 + Gm28351 lincRNA lincRNA MGP_BALBcJ_T0098562.1 MGP_BALBcJ_G0036616.1 mouse_genomes_project 19 34465880 34465986 + Gm23918 rRNA rRNA MGP_BALBcJ_T0051877.1 MGP_BALBcJ_G0025153.1 mouse_genomes_project 19 42475447 42478552 - Pdzd7 protein_coding processed_transcript MGP_BALBcJ_T0051878.1 MGP_BALBcJ_G0025153.1 mouse_genomes_project 19 42475448 42496997 - MGP_BALBcJ_P0051878 Pdzd7 protein_coding protein_coding MGP_BALBcJ_T0051879.1 MGP_BALBcJ_G0025153.1 mouse_genomes_project 19 42475448 42496155 - MGP_BALBcJ_P0051879 Pdzd7 protein_coding protein_coding MGP_BALBcJ_T0011460.1 MGP_BALBcJ_G0009585.1 mouse_genomes_project 19 31540436 31540595 + Gm27818 misc_RNA misc_RNA MGP_BALBcJ_T0017686.1 MGP_BALBcJ_G0015328.1 mouse_genomes_project 19 43740257 43743388 - Gm16726 processed_transcript processed_transcript MGP_BALBcJ_T0003841.1 MGP_BALBcJ_G0003441.1 mouse_genomes_project 19 8062284 8154935 + 4930526L06Rik antisense antisense MGP_BALBcJ_T0051223.1 MGP_BALBcJ_G0024906.1 mouse_genomes_project 19 10078338 10079271 + MGP_BALBcJ_P0051223 Olfr1463 protein_coding protein_coding MGP_BALBcJ_T0052150.1 MGP_BALBcJ_G0025238.1 mouse_genomes_project 19 54347582 54350068 + MGP_BALBcJ_P0052150 Adrb1 protein_coding protein_coding MGP_BALBcJ_T0051774.1 MGP_BALBcJ_G0025118.1 mouse_genomes_project 19 39980750 40000278 - MGP_BALBcJ_P0051774 Loxl4 protein_coding protein_coding MGP_BALBcJ_T0051775.1 MGP_BALBcJ_G0025118.1 mouse_genomes_project 19 39981874 40000278 - MGP_BALBcJ_P0051775 Loxl4 protein_coding protein_coding MGP_BALBcJ_T0051776.1 MGP_BALBcJ_G0025118.1 mouse_genomes_project 19 39982102 39995277 - MGP_BALBcJ_P0051776 Loxl4 protein_coding protein_coding MGP_BALBcJ_T0051777.1 MGP_BALBcJ_G0025118.1 mouse_genomes_project 19 39988321 39990100 - Loxl4 protein_coding processed_transcript MGP_BALBcJ_T0051778.1 MGP_BALBcJ_G0025118.1 mouse_genomes_project 19 39994375 40000237 - MGP_BALBcJ_P0051778 Loxl4 protein_coding protein_coding MGP_BALBcJ_T0050805.1 MGP_BALBcJ_G0024743.1 mouse_genomes_project 19 3850384 3853102 - MGP_BALBcJ_P0050805 Fkbp2 protein_coding protein_coding MGP_BALBcJ_T0050806.1 MGP_BALBcJ_G0024743.1 mouse_genomes_project 19 3850384 3853081 - MGP_BALBcJ_P0050806 Fkbp2 protein_coding protein_coding MGP_BALBcJ_T0010259.1 MGP_BALBcJ_G0008384.1 mouse_genomes_project 19 41870 41934 + Mir6984 miRNA miRNA MGP_BALBcJ_T0051139.1 MGP_BALBcJ_G0024851.1 mouse_genomes_project 19 8414567 8444225 + MGP_BALBcJ_P0051139 Ms4a4d protein_coding protein_coding MGP_BALBcJ_T0100898.1 MGP_BALBcJ_G0038934.1 mouse_genomes_project 19 5780068 5780135 + Gm23246 snoRNA snoRNA MGP_BALBcJ_T0051891.1 MGP_BALBcJ_G0025159.1 mouse_genomes_project 19 43006702 43014578 - MGP_BALBcJ_P0051891 Poll protein_coding unknown_likely_coding MGP_BALBcJ_T0051143.1 MGP_BALBcJ_G0024853.1 mouse_genomes_project 19 8493253 8501369 - MGP_BALBcJ_P0051143 Ms4a2 protein_coding protein_coding MGP_BALBcJ_T0051144.1 MGP_BALBcJ_G0024853.1 mouse_genomes_project 19 8494687 8501404 - MGP_BALBcJ_P0051144 Ms4a2 protein_coding protein_coding MGP_BALBcJ_T0051145.1 MGP_BALBcJ_G0024853.1 mouse_genomes_project 19 8494923 8501328 - MGP_BALBcJ_P0051145 Ms4a2 protein_coding protein_coding MGP_BALBcJ_T0051146.1 MGP_BALBcJ_G0024853.1 mouse_genomes_project 19 8495203 8501344 - MGP_BALBcJ_P0051146 Ms4a2 protein_coding protein_coding MGP_BALBcJ_T0051147.1 MGP_BALBcJ_G0024853.1 mouse_genomes_project 19 8496657 8501373 - Ms4a2 protein_coding processed_transcript MGP_BALBcJ_T0051903.1 MGP_BALBcJ_G0025162.1 mouse_genomes_project 19 43193676 43199763 - MGP_BALBcJ_P0051903 Fgf8 protein_coding protein_coding MGP_BALBcJ_T0051904.1 MGP_BALBcJ_G0025162.1 mouse_genomes_project 19 43193691 43199804 - MGP_BALBcJ_P0051904 Fgf8 protein_coding protein_coding MGP_BALBcJ_T0051905.1 MGP_BALBcJ_G0025162.1 mouse_genomes_project 19 43193696 43199762 - MGP_BALBcJ_P0051905 Fgf8 protein_coding protein_coding MGP_BALBcJ_T0051906.1 MGP_BALBcJ_G0025162.1 mouse_genomes_project 19 43193814 43199747 - MGP_BALBcJ_P0051906 Fgf8 protein_coding protein_coding MGP_BALBcJ_T0051907.1 MGP_BALBcJ_G0025162.1 mouse_genomes_project 19 43193849 43199563 - MGP_BALBcJ_P0051907 Fgf8 protein_coding protein_coding MGP_BALBcJ_T0051908.1 MGP_BALBcJ_G0025162.1 mouse_genomes_project 19 43193868 43199563 - MGP_BALBcJ_P0051908 Fgf8 protein_coding protein_coding MGP_BALBcJ_T0051050.1 MGP_BALBcJ_G0024825.1 mouse_genomes_project 19 7649602 7691966 - MGP_BALBcJ_P0051050 Cd6 protein_coding protein_coding MGP_BALBcJ_T0051051.1 MGP_BALBcJ_G0024825.1 mouse_genomes_project 19 7649607 7659006 - Cd6 protein_coding retained_intron MGP_BALBcJ_T0051052.1 MGP_BALBcJ_G0024825.1 mouse_genomes_project 19 7649610 7691872 - MGP_BALBcJ_P0051052 Cd6 protein_coding protein_coding MGP_BALBcJ_T0051053.1 MGP_BALBcJ_G0024825.1 mouse_genomes_project 19 7651247 7653250 - Cd6 protein_coding retained_intron MGP_BALBcJ_T0051054.1 MGP_BALBcJ_G0024825.1 mouse_genomes_project 19 7654825 7691764 - MGP_BALBcJ_P0051054 Cd6 protein_coding protein_coding MGP_BALBcJ_T0051710.1 MGP_BALBcJ_G0025097.1 mouse_genomes_project 19 38973203 39118379 - MGP_BALBcJ_P0051710 Slit1 protein_coding protein_coding MGP_BALBcJ_T0051711.1 MGP_BALBcJ_G0025097.1 mouse_genomes_project 19 38973205 39118552 - MGP_BALBcJ_P0051711 Slit1 protein_coding protein_coding MGP_BALBcJ_T0051712.1 MGP_BALBcJ_G0025097.1 mouse_genomes_project 19 38973397 39118379 - MGP_BALBcJ_P0051712 Slit1 protein_coding protein_coding MGP_BALBcJ_T0051713.1 MGP_BALBcJ_G0025097.1 mouse_genomes_project 19 38978462 38982719 - Slit1 protein_coding retained_intron MGP_BALBcJ_T0051714.1 MGP_BALBcJ_G0025097.1 mouse_genomes_project 19 39020593 39118373 - MGP_BALBcJ_P0051714 Slit1 protein_coding protein_coding MGP_BALBcJ_T0051874.1 MGP_BALBcJ_G0025152.1 mouse_genomes_project 19 42463187 42475646 + MGP_BALBcJ_P0051874 Lzts2 protein_coding protein_coding MGP_BALBcJ_T0051875.1 MGP_BALBcJ_G0025152.1 mouse_genomes_project 19 42463221 42475646 + MGP_BALBcJ_P0051875 Lzts2 protein_coding protein_coding MGP_BALBcJ_T0051876.1 MGP_BALBcJ_G0025152.1 mouse_genomes_project 19 42466045 42475646 + MGP_BALBcJ_P0051876 Lzts2 protein_coding protein_coding MGP_BALBcJ_T0051390.1 MGP_BALBcJ_G0024986.1 mouse_genomes_project 19 24837395 24905773 - Rfx3 protein_coding processed_transcript MGP_BALBcJ_T0051391.1 MGP_BALBcJ_G0024986.1 mouse_genomes_project 19 24837709 24999311 - MGP_BALBcJ_P0051391 Rfx3 protein_coding protein_coding MGP_BALBcJ_T0051392.1 MGP_BALBcJ_G0024986.1 mouse_genomes_project 19 24837709 24974601 - MGP_BALBcJ_P0051392 Rfx3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051393.1 MGP_BALBcJ_G0024986.1 mouse_genomes_project 19 24874075 25085146 - Rfx3 protein_coding retained_intron MGP_BALBcJ_T0051394.1 MGP_BALBcJ_G0024986.1 mouse_genomes_project 19 24936899 25084770 - MGP_BALBcJ_P0051394 Rfx3 protein_coding protein_coding MGP_BALBcJ_T0100917.1 MGP_BALBcJ_G0038953.1 mouse_genomes_project 19 45216855 45216971 + Gm26085 snoRNA snoRNA MGP_BALBcJ_T0001012.1 MGP_BALBcJ_G0000940.1 mouse_genomes_project 19 11600318 11600585 + TEC TEC MGP_BALBcJ_T0101663.1 MGP_BALBcJ_G0039657.1 mouse_genomes_project 19 9695876 9696618 + transcribed_processed_pseudogene processed_transcript MGP_BALBcJ_T0101664.1 MGP_BALBcJ_G0039657.1 mouse_genomes_project 19 9696060 9696398 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_BALBcJ_T0051594.1 MGP_BALBcJ_G0025053.1 mouse_genomes_project 19 34560000 34653394 - MGP_BALBcJ_P0051594 Ide protein_coding protein_coding MGP_BALBcJ_T0051595.1 MGP_BALBcJ_G0025053.1 mouse_genomes_project 19 34561697 34595230 - Ide protein_coding processed_transcript MGP_BALBcJ_T0051596.1 MGP_BALBcJ_G0025053.1 mouse_genomes_project 19 34571849 34582143 - Ide protein_coding retained_intron MGP_BALBcJ_T0051597.1 MGP_BALBcJ_G0025053.1 mouse_genomes_project 19 34591184 34601411 - Ide protein_coding processed_transcript MGP_BALBcJ_T0051598.1 MGP_BALBcJ_G0025053.1 mouse_genomes_project 19 34591488 34628310 - Ide protein_coding retained_intron MGP_BALBcJ_T0099650.1 MGP_BALBcJ_G0037686.1 mouse_genomes_project 19 44541484 44541591 + Gm23140 snRNA snRNA MGP_BALBcJ_T0050778.1 MGP_BALBcJ_G0024734.1 mouse_genomes_project 19 3777123 3780405 - Prdx5 protein_coding retained_intron MGP_BALBcJ_T0050779.1 MGP_BALBcJ_G0024734.1 mouse_genomes_project 19 3777132 3780533 - MGP_BALBcJ_P0050779 Prdx5 protein_coding protein_coding MGP_BALBcJ_T0050780.1 MGP_BALBcJ_G0024734.1 mouse_genomes_project 19 3777176 3778728 - MGP_BALBcJ_P0050780 Prdx5 protein_coding protein_coding MGP_BALBcJ_T0050781.1 MGP_BALBcJ_G0024734.1 mouse_genomes_project 19 3777272 3780044 - MGP_BALBcJ_P0050781 Prdx5 protein_coding protein_coding MGP_BALBcJ_T0050645.1 MGP_BALBcJ_G0024714.1 mouse_genomes_project 19 2959995 2970111 + MGP_BALBcJ_P0050645 Naaladl1 protein_coding protein_coding MGP_BALBcJ_T0017640.1 MGP_BALBcJ_G0015316.1 mouse_genomes_project 19 3273315 3282557 - Gm14965 processed_transcript antisense MGP_BALBcJ_T0017641.1 MGP_BALBcJ_G0015316.1 mouse_genomes_project 19 3280760 3282557 - Gm14965 processed_transcript retained_intron MGP_BALBcJ_T0010304.1 MGP_BALBcJ_G0008429.1 mouse_genomes_project 19 47243178 47243257 - Gm27935 miRNA miRNA MGP_BALBcJ_T0007091.1 MGP_BALBcJ_G0005816.1 mouse_genomes_project 19 53261983 53325076 - lincRNA lincRNA MGP_BALBcJ_T0050881.1 MGP_BALBcJ_G0024770.1 mouse_genomes_project 19 5716727 5731230 + MGP_BALBcJ_P0050881 Chrm1 protein_coding protein_coding MGP_BALBcJ_T0050882.1 MGP_BALBcJ_G0024770.1 mouse_genomes_project 19 5717100 5736663 + MGP_BALBcJ_P0050882 Chrm1 protein_coding protein_coding MGP_BALBcJ_T0050883.1 MGP_BALBcJ_G0024770.1 mouse_genomes_project 19 5717100 5734643 + MGP_BALBcJ_P0050883 Chrm1 protein_coding protein_coding MGP_BALBcJ_T0013349.1 MGP_BALBcJ_G0011446.1 mouse_genomes_project 19 2896637 2896769 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051848.1 MGP_BALBcJ_G0025143.1 mouse_genomes_project 19 41957787 41986587 - MGP_BALBcJ_P0051848 Sec31b protein_coding protein_coding MGP_BALBcJ_T0051849.1 MGP_BALBcJ_G0025143.1 mouse_genomes_project 19 41958121 41984467 - MGP_BALBcJ_P0051849 Sec31b protein_coding protein_coding MGP_BALBcJ_T0051850.1 MGP_BALBcJ_G0025143.1 mouse_genomes_project 19 41958461 41961410 - MGP_BALBcJ_P0051850 Sec31b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051642.1 MGP_BALBcJ_G0025071.1 mouse_genomes_project 19 36357928 36405541 + MGP_BALBcJ_P0051642 Cyp2c55 protein_coding protein_coding MGP_BALBcJ_T0017687.1 MGP_BALBcJ_G0015329.1 mouse_genomes_project 19 57594678 57599355 + Gm4219 processed_transcript processed_transcript MGP_BALBcJ_T0051041.1 MGP_BALBcJ_G0024817.1 mouse_genomes_project 19 7423917 7430786 - MGP_BALBcJ_P0051041 Tmem138 protein_coding protein_coding MGP_BALBcJ_T0102373.1 MGP_BALBcJ_G0040189.1 mouse_genomes_project 19 6458883 6470330 + unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0050663.1 MGP_BALBcJ_G0024719.1 mouse_genomes_project 19 3045564 3085852 + MGP_BALBcJ_P0050663 Majin protein_coding protein_coding MGP_BALBcJ_T0050664.1 MGP_BALBcJ_G0024719.1 mouse_genomes_project 19 3045643 3085858 + MGP_BALBcJ_P0050664 Majin protein_coding protein_coding MGP_BALBcJ_T0051189.1 MGP_BALBcJ_G0024884.1 mouse_genomes_project 19 9467364 9487244 + MGP_BALBcJ_P0051189 Glyat protein_coding protein_coding MGP_BALBcJ_T0051190.1 MGP_BALBcJ_G0024884.1 mouse_genomes_project 19 9467571 9482505 + Glyat protein_coding retained_intron MGP_BALBcJ_T0051191.1 MGP_BALBcJ_G0024884.1 mouse_genomes_project 19 9467571 9469156 + Glyat protein_coding processed_transcript MGP_BALBcJ_T0051192.1 MGP_BALBcJ_G0024884.1 mouse_genomes_project 19 9467589 9487906 + MGP_BALBcJ_P0051192 Glyat protein_coding protein_coding MGP_BALBcJ_T0051193.1 MGP_BALBcJ_G0024884.1 mouse_genomes_project 19 9473488 9484419 + Glyat protein_coding processed_transcript MGP_BALBcJ_T0050365.1 MGP_BALBcJ_G0024624.1 mouse_genomes_project 19 1024971 1026702 + MGP_BALBcJ_P0050365 Pold4 protein_coding protein_coding MGP_BALBcJ_T0052244.1 MGP_BALBcJ_G0025269.1 mouse_genomes_project 19 58555347 58565745 - MGP_BALBcJ_P0052244 Prdx3 protein_coding protein_coding MGP_BALBcJ_T0050849.1 MGP_BALBcJ_G0024758.1 mouse_genomes_project 19 4307287 4315718 + MGP_BALBcJ_P0050849 2700081O15Rik protein_coding protein_coding MGP_BALBcJ_T0050850.1 MGP_BALBcJ_G0024758.1 mouse_genomes_project 19 4308530 4310902 + 2700081O15Rik protein_coding retained_intron MGP_BALBcJ_T0050851.1 MGP_BALBcJ_G0024758.1 mouse_genomes_project 19 4309903 4313152 + MGP_BALBcJ_P0050851 2700081O15Rik protein_coding protein_coding MGP_BALBcJ_T0050852.1 MGP_BALBcJ_G0024758.1 mouse_genomes_project 19 4310222 4312486 + MGP_BALBcJ_P0050852 2700081O15Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050853.1 MGP_BALBcJ_G0024758.1 mouse_genomes_project 19 4310232 4312138 + MGP_BALBcJ_P0050853 2700081O15Rik protein_coding protein_coding MGP_BALBcJ_T0050854.1 MGP_BALBcJ_G0024758.1 mouse_genomes_project 19 4310841 4315354 + 2700081O15Rik protein_coding retained_intron MGP_BALBcJ_T0050804.1 MGP_BALBcJ_G0024742.1 mouse_genomes_project 19 3847690 3849968 + MGP_BALBcJ_P0050804 Ppp1r14b protein_coding protein_coding MGP_BALBcJ_T0051092.1 MGP_BALBcJ_G0024837.1 mouse_genomes_project 19 7960758 7996680 - MGP_BALBcJ_P0051092 1700017D01Rik protein_coding protein_coding MGP_BALBcJ_T0051093.1 MGP_BALBcJ_G0024837.1 mouse_genomes_project 19 7975258 7977737 - 1700017D01Rik protein_coding retained_intron MGP_BALBcJ_T0050654.1 MGP_BALBcJ_G0024717.1 mouse_genomes_project 19 2993232 3001073 - Arl2 protein_coding retained_intron MGP_BALBcJ_T0050655.1 MGP_BALBcJ_G0024717.1 mouse_genomes_project 19 2993241 3001339 - MGP_BALBcJ_P0050655 Arl2 protein_coding protein_coding MGP_BALBcJ_T0050656.1 MGP_BALBcJ_G0024717.1 mouse_genomes_project 19 2996328 2997019 - Arl2 protein_coding retained_intron MGP_BALBcJ_T0050861.1 MGP_BALBcJ_G0024761.1 mouse_genomes_project 19 4450669 4483865 + MGP_BALBcJ_P0050861 Pla2g16 protein_coding protein_coding MGP_BALBcJ_T0050862.1 MGP_BALBcJ_G0024761.1 mouse_genomes_project 19 4450669 4477048 + MGP_BALBcJ_P0050862 Pla2g16 protein_coding protein_coding MGP_BALBcJ_T0050863.1 MGP_BALBcJ_G0024761.1 mouse_genomes_project 19 4450687 4474457 + MGP_BALBcJ_P0050863 Pla2g16 protein_coding protein_coding MGP_BALBcJ_T0050864.1 MGP_BALBcJ_G0024761.1 mouse_genomes_project 19 4450695 4482031 + MGP_BALBcJ_P0050864 Pla2g16 protein_coding protein_coding MGP_BALBcJ_T0052037.1 MGP_BALBcJ_G0025204.1 mouse_genomes_project 19 45238145 45242107 + MGP_BALBcJ_P0052037 Sfr1 protein_coding protein_coding MGP_BALBcJ_T0100914.1 MGP_BALBcJ_G0038950.1 mouse_genomes_project 19 40094362 40094488 - Gm25216 snoRNA snoRNA MGP_BALBcJ_T0050346.1 MGP_BALBcJ_G0024617.1 mouse_genomes_project 19 945808 947954 + MGP_BALBcJ_P0050346 Ptprcap protein_coding protein_coding MGP_BALBcJ_T0051208.1 MGP_BALBcJ_G0024891.1 mouse_genomes_project 19 9711241 9712271 + MGP_BALBcJ_P0051208 Olfr1444 protein_coding protein_coding MGP_BALBcJ_T0051486.1 MGP_BALBcJ_G0025013.1 mouse_genomes_project 19 29000373 29084609 + MGP_BALBcJ_P0051486 A1cf protein_coding protein_coding MGP_BALBcJ_T0051487.1 MGP_BALBcJ_G0025013.1 mouse_genomes_project 19 29025286 29082711 + MGP_BALBcJ_P0051487 A1cf protein_coding unknown_likely_coding MGP_BALBcJ_T0051538.1 MGP_BALBcJ_G0025035.1 mouse_genomes_project 19 31848257 31849928 + MGP_BALBcJ_P0051538 protein_coding protein_coding MGP_BALBcJ_T0051602.1 MGP_BALBcJ_G0025057.1 mouse_genomes_project 19 34991722 34999531 + MGP_BALBcJ_P0051602 Cyp26c1 protein_coding protein_coding MGP_BALBcJ_T0050667.1 MGP_BALBcJ_G0024721.1 mouse_genomes_project 19 3089397 3097505 - MGP_BALBcJ_P0050667 Ppp2r5b protein_coding protein_coding MGP_BALBcJ_T0050668.1 MGP_BALBcJ_G0024721.1 mouse_genomes_project 19 3090917 3092112 - Ppp2r5b protein_coding retained_intron MGP_BALBcJ_T0050669.1 MGP_BALBcJ_G0024721.1 mouse_genomes_project 19 3095569 3097476 - Ppp2r5b protein_coding processed_transcript MGP_BALBcJ_T0051247.1 MGP_BALBcJ_G0024930.1 mouse_genomes_project 19 11389852 11539049 - MGP_BALBcJ_P0051247 Tle4 protein_coding protein_coding MGP_BALBcJ_T0051248.1 MGP_BALBcJ_G0024930.1 mouse_genomes_project 19 11389930 11539117 - MGP_BALBcJ_P0051248 Tle4 protein_coding protein_coding MGP_BALBcJ_T0007067.1 MGP_BALBcJ_G0005799.1 mouse_genomes_project 19 33100573 33188888 - A830019P07Rik lincRNA lincRNA MGP_BALBcJ_T0051160.1 MGP_BALBcJ_G0024860.1 mouse_genomes_project 19 8653739 8698314 - MGP_BALBcJ_P0051160 Stx3 protein_coding protein_coding MGP_BALBcJ_T0051161.1 MGP_BALBcJ_G0024860.1 mouse_genomes_project 19 8653739 8697790 - MGP_BALBcJ_P0051161 Stx3 protein_coding protein_coding MGP_BALBcJ_T0051162.1 MGP_BALBcJ_G0024860.1 mouse_genomes_project 19 8656245 8698314 - MGP_BALBcJ_P0051162 Stx3 protein_coding protein_coding MGP_BALBcJ_T0010266.1 MGP_BALBcJ_G0008391.1 mouse_genomes_project 19 3125307 3125393 + Mir194-2 miRNA miRNA MGP_BALBcJ_T0050529.1 MGP_BALBcJ_G0024682.1 mouse_genomes_project 19 2399873 2403061 + MGP_BALBcJ_P0050529 Ap5b1 protein_coding protein_coding MGP_BALBcJ_T0051504.1 MGP_BALBcJ_G0025018.1 mouse_genomes_project 19 29818560 29860562 - MGP_BALBcJ_P0051504 Atad1 protein_coding protein_coding MGP_BALBcJ_T0051578.1 MGP_BALBcJ_G0025050.1 mouse_genomes_project 19 34207486 34297508 + MGP_BALBcJ_P0051578 Btaf1 protein_coding protein_coding MGP_BALBcJ_T0007085.1 MGP_BALBcJ_G0005813.1 mouse_genomes_project 19 50648144 50656327 + 1700054A03Rik lincRNA lincRNA MGP_BALBcJ_T0007086.1 MGP_BALBcJ_G0005813.1 mouse_genomes_project 19 50648178 50656327 + 1700054A03Rik lincRNA lincRNA MGP_BALBcJ_T0051616.1 MGP_BALBcJ_G0025064.1 mouse_genomes_project 19 35517248 35554099 - MGP_BALBcJ_P0051616 Fra10ac1 protein_coding protein_coding MGP_BALBcJ_T0051636.1 MGP_BALBcJ_G0025070.1 mouse_genomes_project 19 36280217 36320951 + MGP_BALBcJ_P0051636 Hells protein_coding protein_coding MGP_BALBcJ_T0051637.1 MGP_BALBcJ_G0025070.1 mouse_genomes_project 19 36280332 36289743 + Hells protein_coding retained_intron MGP_BALBcJ_T0051638.1 MGP_BALBcJ_G0025070.1 mouse_genomes_project 19 36280476 36293166 + MGP_BALBcJ_P0051638 Hells protein_coding protein_coding MGP_BALBcJ_T0051639.1 MGP_BALBcJ_G0025070.1 mouse_genomes_project 19 36280692 36302785 + Hells protein_coding processed_transcript MGP_BALBcJ_T0051640.1 MGP_BALBcJ_G0025070.1 mouse_genomes_project 19 36283810 36289844 + Hells protein_coding retained_intron MGP_BALBcJ_T0051641.1 MGP_BALBcJ_G0025070.1 mouse_genomes_project 19 36292940 36299727 + Hells protein_coding processed_transcript MGP_BALBcJ_T0050306.1 MGP_BALBcJ_G0024607.1 mouse_genomes_project 19 825012 827364 - MGP_BALBcJ_P0050306 Gstp1 protein_coding protein_coding MGP_BALBcJ_T0098751.1 MGP_BALBcJ_G0036805.1 mouse_genomes_project 19 8572201 8572277 + Gm25443 scaRNA scaRNA MGP_BALBcJ_T0051837.1 MGP_BALBcJ_G0025136.1 mouse_genomes_project 19 41558995 41566273 - MGP_BALBcJ_P0051837 Bloc1s2 protein_coding protein_coding MGP_BALBcJ_T0050829.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4162882 4229316 - MGP_BALBcJ_P0050829 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050830.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4162885 4230520 - MGP_BALBcJ_P0050830 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050831.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164222 4230500 - MGP_BALBcJ_P0050831 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050832.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164248 4229287 - MGP_BALBcJ_P0050832 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050833.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164338 4170540 - MGP_BALBcJ_P0050833 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050834.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164338 4230505 - MGP_BALBcJ_P0050834 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050835.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164341 4165584 - Mark2 protein_coding retained_intron MGP_BALBcJ_T0050836.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164579 4229316 - MGP_BALBcJ_P0050836 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050837.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164769 4170555 - MGP_BALBcJ_P0050837 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050838.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4164934 4170668 - MGP_BALBcJ_P0050838 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050839.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4165991 4171007 - MGP_BALBcJ_P0050839 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050840.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4166649 4169431 - MGP_BALBcJ_P0050840 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050841.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4168526 4170600 - MGP_BALBcJ_P0050841 Mark2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050842.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4170626 4172268 - Mark2 protein_coding retained_intron MGP_BALBcJ_T0050843.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4172246 4174853 - Mark2 protein_coding retained_intron MGP_BALBcJ_T0050844.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4173309 4230561 - MGP_BALBcJ_P0050844 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050845.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4174826 4230305 - MGP_BALBcJ_P0050845 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050846.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4177849 4230343 - MGP_BALBcJ_P0050846 Mark2 protein_coding protein_coding MGP_BALBcJ_T0050847.1 MGP_BALBcJ_G0024756.1 mouse_genomes_project 19 4178178 4230513 - MGP_BALBcJ_P0050847 Mark2 protein_coding protein_coding MGP_BALBcJ_T0051335.1 MGP_BALBcJ_G0024966.1 mouse_genomes_project 19 20771385 20966202 + MGP_BALBcJ_P0051335 Apba1 protein_coding protein_coding MGP_BALBcJ_T0011458.1 MGP_BALBcJ_G0009583.1 mouse_genomes_project 19 27830123 27830441 + Gm23426 misc_RNA misc_RNA MGP_BALBcJ_T0051681.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 37978939 37980716 + Entpd1 protein_coding processed_transcript MGP_BALBcJ_T0051682.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 37978962 37982289 + Entpd1 protein_coding processed_transcript MGP_BALBcJ_T0051683.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 37978970 38107966 + MGP_BALBcJ_P0051683 Entpd1 protein_coding protein_coding MGP_BALBcJ_T0051684.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38027195 38109774 + MGP_BALBcJ_P0051684 Entpd1 protein_coding protein_coding MGP_BALBcJ_T0051685.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38027224 38092990 + MGP_BALBcJ_P0051685 Entpd1 protein_coding protein_coding MGP_BALBcJ_T0051686.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38027269 38107255 + MGP_BALBcJ_P0051686 Entpd1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051687.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38027624 38079549 + Entpd1 protein_coding processed_transcript MGP_BALBcJ_T0051688.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38027918 38091073 + Entpd1 protein_coding processed_transcript MGP_BALBcJ_T0051689.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38049332 38091169 + Entpd1 protein_coding processed_transcript MGP_BALBcJ_T0051690.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38094013 38107927 + MGP_BALBcJ_P0051690 Entpd1 protein_coding protein_coding MGP_BALBcJ_T0051691.1 MGP_BALBcJ_G0025085.1 mouse_genomes_project 19 38104355 38105037 + Entpd1 protein_coding processed_transcript MGP_BALBcJ_T0051336.1 MGP_BALBcJ_G0024967.1 mouse_genomes_project 19 20989260 21049357 - MGP_BALBcJ_P0051336 Fam189a2 protein_coding protein_coding MGP_BALBcJ_T0052094.1 MGP_BALBcJ_G0025226.1 mouse_genomes_project 19 52789241 52798173 + MGP_BALBcJ_P0052094 Tectb protein_coding protein_coding MGP_BALBcJ_T0052095.1 MGP_BALBcJ_G0025226.1 mouse_genomes_project 19 52789244 52803394 + MGP_BALBcJ_P0052095 Tectb protein_coding protein_coding MGP_BALBcJ_T0052096.1 MGP_BALBcJ_G0025226.1 mouse_genomes_project 19 52789393 52804838 + MGP_BALBcJ_P0052096 Tectb protein_coding protein_coding MGP_BALBcJ_T0052097.1 MGP_BALBcJ_G0025226.1 mouse_genomes_project 19 52798085 52803219 + MGP_BALBcJ_P0052097 Tectb protein_coding protein_coding MGP_BALBcJ_T0052098.1 MGP_BALBcJ_G0025226.1 mouse_genomes_project 19 52798137 52798832 + Tectb protein_coding retained_intron MGP_BALBcJ_T0052099.1 MGP_BALBcJ_G0025226.1 mouse_genomes_project 19 52800540 52804829 + Tectb protein_coding processed_transcript MGP_BALBcJ_T0051327.1 MGP_BALBcJ_G0024959.1 mouse_genomes_project 19 20148589 20174541 + MGP_BALBcJ_P0051327 Klf9 protein_coding protein_coding MGP_BALBcJ_T0051226.1 MGP_BALBcJ_G0024909.1 mouse_genomes_project 19 10219655 10220582 + MGP_BALBcJ_P0051226 Olfr1467 protein_coding protein_coding MGP_BALBcJ_T0011459.1 MGP_BALBcJ_G0009584.1 mouse_genomes_project 19 30120369 30120728 - Gm22482 misc_RNA misc_RNA MGP_BALBcJ_T0050310.1 MGP_BALBcJ_G0024610.1 mouse_genomes_project 19 871616 875715 + MGP_BALBcJ_P0050310 Cabp2 protein_coding protein_coding MGP_BALBcJ_T0050311.1 MGP_BALBcJ_G0024610.1 mouse_genomes_project 19 872526 877375 + MGP_BALBcJ_P0050311 Cabp2 protein_coding protein_coding MGP_BALBcJ_T0050312.1 MGP_BALBcJ_G0024610.1 mouse_genomes_project 19 873528 877379 + MGP_BALBcJ_P0050312 Cabp2 protein_coding protein_coding MGP_BALBcJ_T0050313.1 MGP_BALBcJ_G0024610.1 mouse_genomes_project 19 873557 877379 + MGP_BALBcJ_P0050313 Cabp2 protein_coding protein_coding MGP_BALBcJ_T0050314.1 MGP_BALBcJ_G0024610.1 mouse_genomes_project 19 876513 877376 + Cabp2 protein_coding processed_transcript MGP_BALBcJ_T0010291.1 MGP_BALBcJ_G0008416.1 mouse_genomes_project 19 32548864 32548934 - Gm23075 miRNA miRNA MGP_BALBcJ_T0051524.1 MGP_BALBcJ_G0025028.1 mouse_genomes_project 19 31438023 31484947 + MGP_BALBcJ_P0051524 protein_coding unknown_likely_coding MGP_BALBcJ_T0051525.1 MGP_BALBcJ_G0025028.1 mouse_genomes_project 19 31438286 31475990 + MGP_BALBcJ_P0051525 protein_coding protein_coding MGP_BALBcJ_T0051526.1 MGP_BALBcJ_G0025028.1 mouse_genomes_project 19 31462783 31480427 + protein_coding retained_intron MGP_BALBcJ_T0051527.1 MGP_BALBcJ_G0025028.1 mouse_genomes_project 19 31477256 31478843 + protein_coding processed_transcript MGP_BALBcJ_T0017661.1 MGP_BALBcJ_G0015319.1 mouse_genomes_project 19 7051754 7055770 + Gm10143 processed_transcript processed_transcript MGP_BALBcJ_T0017662.1 MGP_BALBcJ_G0015319.1 mouse_genomes_project 19 7052573 7055768 + Gm10143 processed_transcript processed_transcript MGP_BALBcJ_T0052087.1 MGP_BALBcJ_G0025221.1 mouse_genomes_project 19 51495128 51533439 + MGP_BALBcJ_P0052087 Pdcd4 protein_coding protein_coding MGP_BALBcJ_T0052088.1 MGP_BALBcJ_G0025221.1 mouse_genomes_project 19 51506261 51533439 + MGP_BALBcJ_P0052088 Pdcd4 protein_coding protein_coding MGP_BALBcJ_T0052089.1 MGP_BALBcJ_G0025221.1 mouse_genomes_project 19 51506261 51533439 + MGP_BALBcJ_P0052089 Pdcd4 protein_coding protein_coding MGP_BALBcJ_T0052101.1 MGP_BALBcJ_G0025228.1 mouse_genomes_project 19 52864383 52907430 + MGP_BALBcJ_P0052101 Acsl5 protein_coding protein_coding MGP_BALBcJ_T0013364.1 MGP_BALBcJ_G0011461.1 mouse_genomes_project 19 21737351 21738341 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0100909.1 MGP_BALBcJ_G0038945.1 mouse_genomes_project 19 22207607 22207739 - Gm24252 snoRNA snoRNA MGP_BALBcJ_T0100890.1 MGP_BALBcJ_G0038926.1 mouse_genomes_project 19 868344 868560 - Gm23927 snoRNA snoRNA MGP_BALBcJ_T0051944.1 MGP_BALBcJ_G0025170.1 mouse_genomes_project 19 43544458 43554796 + MGP_BALBcJ_P0051944 Nolc1 protein_coding protein_coding MGP_BALBcJ_T0051945.1 MGP_BALBcJ_G0025170.1 mouse_genomes_project 19 43544625 43554805 + MGP_BALBcJ_P0051945 Nolc1 protein_coding unknown_likely_coding MGP_BALBcJ_T0052205.1 MGP_BALBcJ_G0025249.1 mouse_genomes_project 19 56320346 56333024 + MGP_BALBcJ_P0052205 Pnlip protein_coding protein_coding MGP_BALBcJ_T0098350.1 MGP_BALBcJ_G0036404.1 mouse_genomes_project 19 9866620 9867545 + pseudogene pseudogene MGP_BALBcJ_T0050495.1 MGP_BALBcJ_G0024672.1 mouse_genomes_project 19 2274938 2284334 + MGP_BALBcJ_P0050495 Fosl1 protein_coding protein_coding MGP_BALBcJ_T0010307.1 MGP_BALBcJ_G0008432.1 mouse_genomes_project 19 52801184 52801241 + Mir6715 miRNA miRNA MGP_BALBcJ_T0100913.1 MGP_BALBcJ_G0038949.1 mouse_genomes_project 19 35380938 35381063 + Gm23300 snoRNA snoRNA MGP_BALBcJ_T0007092.1 MGP_BALBcJ_G0005817.1 mouse_genomes_project 19 54961269 54997737 - B230217O12Rik lincRNA lincRNA MGP_BALBcJ_T0098353.1 MGP_BALBcJ_G0036407.1 mouse_genomes_project 19 13747775 13748332 + pseudogene pseudogene MGP_BALBcJ_T0051360.1 MGP_BALBcJ_G0024980.1 mouse_genomes_project 19 22728732 22735296 + MGP_BALBcJ_P0051360 Dmrt2 protein_coding protein_coding MGP_BALBcJ_T0052224.1 MGP_BALBcJ_G0025261.1 mouse_genomes_project 19 57553770 57594611 - MGP_BALBcJ_P0052224 Rab11fip2 protein_coding protein_coding MGP_BALBcJ_T0052225.1 MGP_BALBcJ_G0025261.1 mouse_genomes_project 19 57554582 57594321 - MGP_BALBcJ_P0052225 Rab11fip2 protein_coding protein_coding MGP_BALBcJ_T0052226.1 MGP_BALBcJ_G0025261.1 mouse_genomes_project 19 57557802 57593957 - MGP_BALBcJ_P0052226 Rab11fip2 protein_coding protein_coding MGP_BALBcJ_T0003856.1 MGP_BALBcJ_G0003451.1 mouse_genomes_project 19 42272801 42280212 - 1700039E22Rik antisense antisense MGP_BALBcJ_T0050361.1 MGP_BALBcJ_G0024623.1 mouse_genomes_project 19 1007289 1016564 + MGP_BALBcJ_P0050361 Clcf1 protein_coding protein_coding MGP_BALBcJ_T0050362.1 MGP_BALBcJ_G0024623.1 mouse_genomes_project 19 1007315 1016564 + Clcf1 protein_coding retained_intron MGP_BALBcJ_T0050363.1 MGP_BALBcJ_G0024623.1 mouse_genomes_project 19 1007356 1016564 + MGP_BALBcJ_P0050363 Clcf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050364.1 MGP_BALBcJ_G0024623.1 mouse_genomes_project 19 1007645 1015587 + Clcf1 protein_coding processed_transcript MGP_BALBcJ_T0051217.1 MGP_BALBcJ_G0024900.1 mouse_genomes_project 19 9914352 9915276 + MGP_BALBcJ_P0051217 Olfr1454 protein_coding protein_coding MGP_BALBcJ_T0100912.1 MGP_BALBcJ_G0038948.1 mouse_genomes_project 19 33027481 33027614 - Gm25611 snoRNA snoRNA MGP_BALBcJ_T0050459.1 MGP_BALBcJ_G0024656.1 mouse_genomes_project 19 1885796 1887070 - Tmem151a protein_coding processed_transcript MGP_BALBcJ_T0050460.1 MGP_BALBcJ_G0024656.1 mouse_genomes_project 19 1885972 1906090 - MGP_BALBcJ_P0050460 Tmem151a protein_coding protein_coding MGP_BALBcJ_T0050461.1 MGP_BALBcJ_G0024656.1 mouse_genomes_project 19 1886791 1906090 - MGP_BALBcJ_P0050461 Tmem151a protein_coding protein_coding MGP_BALBcJ_T0050462.1 MGP_BALBcJ_G0024656.1 mouse_genomes_project 19 1899063 1906134 - MGP_BALBcJ_P0050462 Tmem151a protein_coding protein_coding MGP_BALBcJ_T0050463.1 MGP_BALBcJ_G0024656.1 mouse_genomes_project 19 1902635 1905484 - Tmem151a protein_coding processed_transcript MGP_BALBcJ_T0051048.1 MGP_BALBcJ_G0024823.1 mouse_genomes_project 19 7560890 7572252 + MGP_BALBcJ_P0051048 Vps37c protein_coding unknown_likely_coding MGP_BALBcJ_T0013347.1 MGP_BALBcJ_G0011444.1 mouse_genomes_project 19 1372 2765 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051219.1 MGP_BALBcJ_G0024902.1 mouse_genomes_project 19 9960763 9961669 - MGP_BALBcJ_P0051219 Olfr1458 protein_coding protein_coding MGP_BALBcJ_T0051974.1 MGP_BALBcJ_G0025178.1 mouse_genomes_project 19 43832538 43850539 + MGP_BALBcJ_P0051974 Mfsd13a protein_coding protein_coding MGP_BALBcJ_T0051975.1 MGP_BALBcJ_G0025178.1 mouse_genomes_project 19 43832612 43850529 + MGP_BALBcJ_P0051975 Mfsd13a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051976.1 MGP_BALBcJ_G0025178.1 mouse_genomes_project 19 43842033 43850529 + Mfsd13a protein_coding retained_intron MGP_BALBcJ_T0050945.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5895099 5906224 + MGP_BALBcJ_P0050945 Bscl2 protein_coding protein_coding MGP_BALBcJ_T0050946.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5895319 5897879 + Bscl2 protein_coding processed_transcript MGP_BALBcJ_T0050947.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5895361 5906208 + MGP_BALBcJ_P0050947 Bscl2 protein_coding protein_coding MGP_BALBcJ_T0050948.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5896963 5906207 + MGP_BALBcJ_P0050948 Bscl2 protein_coding protein_coding MGP_BALBcJ_T0050949.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5897008 5906208 + Bscl2 protein_coding retained_intron MGP_BALBcJ_T0050950.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5897025 5906179 + MGP_BALBcJ_P0050950 Bscl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050951.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5898154 5906207 + MGP_BALBcJ_P0050951 Bscl2 protein_coding protein_coding MGP_BALBcJ_T0050952.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5898170 5906207 + Bscl2 protein_coding retained_intron MGP_BALBcJ_T0050953.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5898170 5906207 + Bscl2 protein_coding retained_intron MGP_BALBcJ_T0050954.1 MGP_BALBcJ_G0024782.1 mouse_genomes_project 19 5903825 5906164 + MGP_BALBcJ_P0050954 Bscl2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0007059.1 MGP_BALBcJ_G0005794.1 mouse_genomes_project 19 26588892 26624495 - A930007I19Rik lincRNA lincRNA MGP_BALBcJ_T0007060.1 MGP_BALBcJ_G0005794.1 mouse_genomes_project 19 26589471 26625660 - A930007I19Rik lincRNA lincRNA MGP_BALBcJ_T0007061.1 MGP_BALBcJ_G0005794.1 mouse_genomes_project 19 26606223 26624490 - A930007I19Rik lincRNA lincRNA MGP_BALBcJ_T0052090.1 MGP_BALBcJ_G0025222.1 mouse_genomes_project 19 51533254 51548101 - MGP_BALBcJ_P0052090 Bbip1 protein_coding protein_coding MGP_BALBcJ_T0050891.1 MGP_BALBcJ_G0024772.1 mouse_genomes_project 19 5790358 5795371 + MGP_BALBcJ_P0050891 Wdr74 protein_coding protein_coding MGP_BALBcJ_T0051996.1 MGP_BALBcJ_G0025186.1 mouse_genomes_project 19 44169017 44182845 + MGP_BALBcJ_P0051996 Borcs7 protein_coding protein_coding MGP_BALBcJ_T0051046.1 MGP_BALBcJ_G0024822.1 mouse_genomes_project 19 7525716 7541846 - MGP_BALBcJ_P0051046 Pga5 protein_coding unknown_likely_coding MGP_BALBcJ_T0051047.1 MGP_BALBcJ_G0024822.1 mouse_genomes_project 19 7525720 7535382 - MGP_BALBcJ_P0051047 Pga5 protein_coding protein_coding MGP_BALBcJ_T0051176.1 MGP_BALBcJ_G0024874.1 mouse_genomes_project 19 9107855 9111038 + MGP_BALBcJ_P0051176 protein_coding protein_coding MGP_BALBcJ_T0050675.1 MGP_BALBcJ_G0024723.1 mouse_genomes_project 19 3138102 3163576 + MGP_BALBcJ_P0050675 Ehd1 protein_coding protein_coding MGP_BALBcJ_T0050676.1 MGP_BALBcJ_G0024723.1 mouse_genomes_project 19 3138302 3142770 + Ehd1 protein_coding retained_intron MGP_BALBcJ_T0050677.1 MGP_BALBcJ_G0024723.1 mouse_genomes_project 19 3156575 3161357 + Ehd1 protein_coding retained_intron MGP_BALBcJ_T0050678.1 MGP_BALBcJ_G0024723.1 mouse_genomes_project 19 3161393 3161840 + Ehd1 protein_coding processed_transcript MGP_BALBcJ_T0007096.1 MGP_BALBcJ_G0005821.1 mouse_genomes_project 19 57809168 57827160 + E330013P04Rik lincRNA lincRNA MGP_BALBcJ_T0007097.1 MGP_BALBcJ_G0005821.1 mouse_genomes_project 19 57809197 57817569 + E330013P04Rik lincRNA lincRNA MGP_BALBcJ_T0007098.1 MGP_BALBcJ_G0005821.1 mouse_genomes_project 19 57815773 57821825 + E330013P04Rik lincRNA lincRNA MGP_BALBcJ_T0051702.1 MGP_BALBcJ_G0025091.1 mouse_genomes_project 19 38456689 38573153 - MGP_BALBcJ_P0051702 Tll2 protein_coding protein_coding MGP_BALBcJ_T0051703.1 MGP_BALBcJ_G0025091.1 mouse_genomes_project 19 38456689 38573153 - MGP_BALBcJ_P0051703 Tll2 protein_coding protein_coding MGP_BALBcJ_T0052170.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54664316 54844941 - MGP_BALBcJ_P0052170 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052171.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54664473 54749672 - MGP_BALBcJ_P0052171 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052172.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54664849 54749672 - MGP_BALBcJ_P0052172 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052173.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54664856 54826853 - MGP_BALBcJ_P0052173 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052174.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54667861 54872088 - MGP_BALBcJ_P0052174 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052175.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668004 54749670 - MGP_BALBcJ_P0052175 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052176.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668065 54749576 - MGP_BALBcJ_P0052176 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052177.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668282 54826678 - MGP_BALBcJ_P0052177 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052178.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668564 54872620 - MGP_BALBcJ_P0052178 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052179.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668602 54844874 - MGP_BALBcJ_P0052179 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052180.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668738 54826613 - MGP_BALBcJ_P0052180 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052181.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668780 54826718 - MGP_BALBcJ_P0052181 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052182.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54668849 54952846 - Ablim1 protein_coding retained_intron MGP_BALBcJ_T0052183.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54671037 54678860 - Ablim1 protein_coding processed_transcript MGP_BALBcJ_T0052184.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54672659 54676547 - Ablim1 protein_coding retained_intron MGP_BALBcJ_T0052185.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54692474 54765236 - Ablim1 protein_coding retained_intron MGP_BALBcJ_T0052186.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54708345 54765205 - Ablim1 protein_coding processed_transcript MGP_BALBcJ_T0052187.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54746709 54749687 - Ablim1 protein_coding processed_transcript MGP_BALBcJ_T0052188.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54760784 54765236 - Ablim1 protein_coding processed_transcript MGP_BALBcJ_T0052189.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54761126 54952838 - MGP_BALBcJ_P0052189 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0052190.1 MGP_BALBcJ_G0025243.1 mouse_genomes_project 19 54761366 54811595 - MGP_BALBcJ_P0052190 Ablim1 protein_coding protein_coding MGP_BALBcJ_T0051207.1 MGP_BALBcJ_G0024890.1 mouse_genomes_project 19 9648418 9683146 + MGP_BALBcJ_P0051207 Lpxn protein_coding protein_coding MGP_BALBcJ_T0050478.1 MGP_BALBcJ_G0024663.1 mouse_genomes_project 19 2129258 2139685 + MGP_BALBcJ_P0050478 Gal3st3 protein_coding protein_coding MGP_BALBcJ_T0003863.1 MGP_BALBcJ_G0003458.1 mouse_genomes_project 19 55851155 55883252 + Gm16277 antisense antisense MGP_BALBcJ_T0050527.1 MGP_BALBcJ_G0024680.1 mouse_genomes_project 19 2332169 2333190 - MGP_BALBcJ_P0050527 1700020D05Rik protein_coding protein_coding MGP_BALBcJ_T0050647.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2973717 2982695 - MGP_BALBcJ_P0050647 Snx15 protein_coding protein_coding MGP_BALBcJ_T0050648.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2974170 2982538 - MGP_BALBcJ_P0050648 Snx15 protein_coding protein_coding MGP_BALBcJ_T0050649.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2974950 2975961 - Snx15 protein_coding retained_intron MGP_BALBcJ_T0050650.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2974950 2982198 - Snx15 protein_coding processed_transcript MGP_BALBcJ_T0050651.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2975810 2976606 - Snx15 protein_coding processed_transcript MGP_BALBcJ_T0050652.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2976223 2982524 - Snx15 protein_coding retained_intron MGP_BALBcJ_T0050653.1 MGP_BALBcJ_G0024716.1 mouse_genomes_project 19 2976245 2982556 - MGP_BALBcJ_P0050653 Snx15 protein_coding protein_coding MGP_BALBcJ_T0052257.1 MGP_BALBcJ_G0025273.1 mouse_genomes_project 19 58954913 58959174 - MGP_BALBcJ_P0052257 Csf2ra protein_coding protein_coding MGP_BALBcJ_T0017639.1 MGP_BALBcJ_G0015315.1 mouse_genomes_project 19 3129459 3137983 - Gm14963 processed_transcript processed_transcript MGP_BALBcJ_T0010288.1 MGP_BALBcJ_G0008413.1 mouse_genomes_project 19 32012293 32012397 + Gm27476 miRNA miRNA MGP_BALBcJ_T0051419.1 MGP_BALBcJ_G0024991.1 mouse_genomes_project 19 26083390 26110509 + MGP_BALBcJ_P0051419 Cdc37l1 protein_coding protein_coding MGP_BALBcJ_T0051420.1 MGP_BALBcJ_G0024991.1 mouse_genomes_project 19 26083434 26110517 + MGP_BALBcJ_P0051420 Cdc37l1 protein_coding unknown_likely_coding MGP_BALBcJ_T0051166.1 MGP_BALBcJ_G0024864.1 mouse_genomes_project 19 8781757 8782809 + MGP_BALBcJ_P0051166 Olfr1420 protein_coding protein_coding MGP_BALBcJ_T0050630.1 MGP_BALBcJ_G0024710.1 mouse_genomes_project 19 2930189 2935482 - MGP_BALBcJ_P0050630 Gm28374 protein_coding protein_coding MGP_BALBcJ_T0050433.1 MGP_BALBcJ_G0024643.1 mouse_genomes_project 19 1667024 1672808 + MGP_BALBcJ_P0050433 Ctsf protein_coding protein_coding MGP_BALBcJ_T0051591.1 MGP_BALBcJ_G0025052.1 mouse_genomes_project 19 34494518 34507973 + MGP_BALBcJ_P0051591 March5 protein_coding protein_coding MGP_BALBcJ_T0051592.1 MGP_BALBcJ_G0025052.1 mouse_genomes_project 19 34494526 34504538 + March5 protein_coding retained_intron MGP_BALBcJ_T0051593.1 MGP_BALBcJ_G0025052.1 mouse_genomes_project 19 34494820 34508403 + MGP_BALBcJ_P0051593 March5 protein_coding protein_coding MGP_BALBcJ_T0010260.1 MGP_BALBcJ_G0008385.1 mouse_genomes_project 19 1008453 1008540 - Gm26115 miRNA miRNA MGP_BALBcJ_T0013353.1 MGP_BALBcJ_G0011450.1 mouse_genomes_project 19 5640269 5641059 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0098565.1 MGP_BALBcJ_G0036619.1 mouse_genomes_project 19 45755032 45755143 - Gm23857 rRNA rRNA MGP_BALBcJ_T0050963.1 MGP_BALBcJ_G0024788.1 mouse_genomes_project 19 5947803 5953912 + MGP_BALBcJ_P0050963 Ints5 protein_coding protein_coding MGP_BALBcJ_T0050969.1 MGP_BALBcJ_G0024788.1 mouse_genomes_project 19 5949464 5954160 + Ints5 protein_coding processed_transcript MGP_BALBcJ_T0050970.1 MGP_BALBcJ_G0024788.1 mouse_genomes_project 19 5951922 5958440 + MGP_BALBcJ_P0050970 Ints5 protein_coding protein_coding MGP_BALBcJ_T0052215.1 MGP_BALBcJ_G0025255.1 mouse_genomes_project 19 56634330 56735427 - MGP_BALBcJ_P0052215 Shtn1 protein_coding protein_coding MGP_BALBcJ_T0051987.1 MGP_BALBcJ_G0025184.1 mouse_genomes_project 19 44077240 44137051 + MGP_BALBcJ_P0051987 Wbp1l protein_coding protein_coding MGP_BALBcJ_T0051988.1 MGP_BALBcJ_G0025184.1 mouse_genomes_project 19 44077269 44137047 + MGP_BALBcJ_P0051988 Wbp1l protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051989.1 MGP_BALBcJ_G0025184.1 mouse_genomes_project 19 44077270 44137044 + MGP_BALBcJ_P0051989 Wbp1l protein_coding protein_coding MGP_BALBcJ_T0051990.1 MGP_BALBcJ_G0025184.1 mouse_genomes_project 19 44077280 44124445 + Wbp1l protein_coding processed_transcript MGP_BALBcJ_T0051991.1 MGP_BALBcJ_G0025184.1 mouse_genomes_project 19 44101878 44132214 + Wbp1l protein_coding processed_transcript MGP_BALBcJ_T0051992.1 MGP_BALBcJ_G0025184.1 mouse_genomes_project 19 44101878 44137049 + MGP_BALBcJ_P0051992 Wbp1l protein_coding protein_coding MGP_BALBcJ_T0051270.1 MGP_BALBcJ_G0024940.1 mouse_genomes_project 19 14373247 14381498 + MGP_BALBcJ_P0051270 Rfk protein_coding protein_coding MGP_BALBcJ_T0051271.1 MGP_BALBcJ_G0024940.1 mouse_genomes_project 19 14373772 14380004 + Rfk protein_coding processed_transcript MGP_BALBcJ_T0051272.1 MGP_BALBcJ_G0024940.1 mouse_genomes_project 19 14376641 14380107 + Rfk protein_coding processed_transcript MGP_BALBcJ_T0007084.1 MGP_BALBcJ_G0005812.1 mouse_genomes_project 19 48219417 48323090 + Gm26629 lincRNA lincRNA MGP_BALBcJ_T0010284.1 MGP_BALBcJ_G0008409.1 mouse_genomes_project 19 26234804 26234901 + Mir101b miRNA miRNA MGP_BALBcJ_T0051284.1 MGP_BALBcJ_G0024945.1 mouse_genomes_project 19 15694368 15699589 + MGP_BALBcJ_P0051284 D030056L22Rik protein_coding protein_coding MGP_BALBcJ_T0051285.1 MGP_BALBcJ_G0024945.1 mouse_genomes_project 19 15694411 15699589 + MGP_BALBcJ_P0051285 D030056L22Rik protein_coding protein_coding MGP_BALBcJ_T0100897.1 MGP_BALBcJ_G0038933.1 mouse_genomes_project 19 5779815 5779884 + Gm22680 snoRNA snoRNA MGP_BALBcJ_T0050600.1 MGP_BALBcJ_G0024705.1 mouse_genomes_project 19 2909871 2911510 + MGP_BALBcJ_P0050600 Fau protein_coding protein_coding MGP_BALBcJ_T0050601.1 MGP_BALBcJ_G0024705.1 mouse_genomes_project 19 2909871 2911510 + MGP_BALBcJ_P0050601 Fau protein_coding protein_coding MGP_BALBcJ_T0050603.1 MGP_BALBcJ_G0024705.1 mouse_genomes_project 19 2909950 2911510 + MGP_BALBcJ_P0050603 Fau protein_coding protein_coding MGP_BALBcJ_T0051033.1 MGP_BALBcJ_G0024814.1 mouse_genomes_project 19 7353389 7378247 - MGP_BALBcJ_P0051033 Sdhaf2 protein_coding protein_coding MGP_BALBcJ_T0007068.1 MGP_BALBcJ_G0005800.1 mouse_genomes_project 19 34460539 34483635 + A330032B11Rik lincRNA lincRNA MGP_BALBcJ_T0051278.1 MGP_BALBcJ_G0024943.1 mouse_genomes_project 19 15611395 15615845 + Nmrk1 protein_coding retained_intron MGP_BALBcJ_T0051279.1 MGP_BALBcJ_G0024943.1 mouse_genomes_project 19 15611395 15631681 + MGP_BALBcJ_P0051279 Nmrk1 protein_coding protein_coding MGP_BALBcJ_T0051280.1 MGP_BALBcJ_G0024943.1 mouse_genomes_project 19 15611395 15631410 + MGP_BALBcJ_P0051280 Nmrk1 protein_coding protein_coding MGP_BALBcJ_T0051281.1 MGP_BALBcJ_G0024943.1 mouse_genomes_project 19 15611404 15620674 + MGP_BALBcJ_P0051281 Nmrk1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051282.1 MGP_BALBcJ_G0024943.1 mouse_genomes_project 19 15611407 15616752 + Nmrk1 protein_coding retained_intron MGP_BALBcJ_T0007044.1 MGP_BALBcJ_G0005783.1 mouse_genomes_project 19 7905716 7908795 - AW112010 lincRNA lincRNA MGP_BALBcJ_T0050279.1 MGP_BALBcJ_G0024598.1 mouse_genomes_project 19 699190 715458 - MGP_BALBcJ_P0050279 Aldh3b1 protein_coding protein_coding MGP_BALBcJ_T0052229.1 MGP_BALBcJ_G0025264.1 mouse_genomes_project 19 58193516 58256865 - MGP_BALBcJ_P0052229 Cacul1 protein_coding protein_coding MGP_BALBcJ_T0052230.1 MGP_BALBcJ_G0025264.1 mouse_genomes_project 19 58193516 58256865 - MGP_BALBcJ_P0052230 Cacul1 protein_coding protein_coding MGP_BALBcJ_T0052231.1 MGP_BALBcJ_G0025264.1 mouse_genomes_project 19 58193516 58256865 - MGP_BALBcJ_P0052231 Cacul1 protein_coding protein_coding MGP_BALBcJ_T0013348.1 MGP_BALBcJ_G0011445.1 mouse_genomes_project 19 2244081 2244276 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051245.1 MGP_BALBcJ_G0024928.1 mouse_genomes_project 19 10832483 10833568 - MGP_BALBcJ_P0051245 Olfr1504 protein_coding protein_coding MGP_BALBcJ_T0100918.1 MGP_BALBcJ_G0038954.1 mouse_genomes_project 19 53902736 53902864 - Gm22271 snoRNA snoRNA MGP_BALBcJ_T0099636.1 MGP_BALBcJ_G0037672.1 mouse_genomes_project 19 11661846 11661969 - Gm26026 snRNA snRNA MGP_BALBcJ_T0050536.1 MGP_BALBcJ_G0024685.1 mouse_genomes_project 19 2470537 2481231 + MGP_BALBcJ_P0050536 Rela protein_coding protein_coding MGP_BALBcJ_T0051083.1 MGP_BALBcJ_G0024833.1 mouse_genomes_project 19 7822692 7835070 - MGP_BALBcJ_P0051083 Ms4a10 protein_coding protein_coding MGP_BALBcJ_T0051084.1 MGP_BALBcJ_G0024833.1 mouse_genomes_project 19 7822696 7835045 - MGP_BALBcJ_P0051084 Ms4a10 protein_coding protein_coding MGP_BALBcJ_T0051085.1 MGP_BALBcJ_G0024833.1 mouse_genomes_project 19 7822699 7826256 - MGP_BALBcJ_P0051085 Ms4a10 protein_coding protein_coding MGP_BALBcJ_T0051079.1 MGP_BALBcJ_G0024831.1 mouse_genomes_project 19 7799535 7804865 + MGP_BALBcJ_P0051079 Ptgdr2 protein_coding protein_coding MGP_BALBcJ_T0051233.1 MGP_BALBcJ_G0024916.1 mouse_genomes_project 19 10393662 10394551 + MGP_BALBcJ_P0051233 protein_coding protein_coding MGP_BALBcJ_T0099644.1 MGP_BALBcJ_G0037680.1 mouse_genomes_project 19 33657742 33657848 - Gm23170 snRNA snRNA MGP_BALBcJ_T0050892.1 MGP_BALBcJ_G0024773.1 mouse_genomes_project 19 5795465 5795973 + MGP_BALBcJ_P0050892 1700092M07Rik protein_coding protein_coding MGP_BALBcJ_T0050893.1 MGP_BALBcJ_G0024773.1 mouse_genomes_project 19 5795509 5795972 + 1700092M07Rik protein_coding retained_intron MGP_BALBcJ_T0017642.1 MGP_BALBcJ_G0015317.1 mouse_genomes_project 19 3484751 3545016 - 2410152P15Rik processed_transcript processed_transcript MGP_BALBcJ_T0007064.1 MGP_BALBcJ_G0005797.1 mouse_genomes_project 19 31718588 31720399 + Gm26902 lincRNA lincRNA MGP_BALBcJ_T0007065.1 MGP_BALBcJ_G0005797.1 mouse_genomes_project 19 31718613 31725890 + Gm26902 lincRNA lincRNA MGP_BALBcJ_T0051129.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8348157 8390457 + MGP_BALBcJ_P0051129 Gm8369 protein_coding protein_coding MGP_BALBcJ_T0051130.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8348157 8389580 + MGP_BALBcJ_P0051130 Gm8369 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051131.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8348169 8382384 + Gm8369 protein_coding retained_intron MGP_BALBcJ_T0051132.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8354797 8380551 + Gm8369 protein_coding processed_transcript MGP_BALBcJ_T0051133.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8354899 8361414 + Gm8369 protein_coding processed_transcript MGP_BALBcJ_T0051134.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8354968 8361303 + Gm8369 protein_coding retained_intron MGP_BALBcJ_T0051135.1 MGP_BALBcJ_G0024849.1 mouse_genomes_project 19 8375762 8390457 + MGP_BALBcJ_P0051135 Gm8369 protein_coding protein_coding MGP_BALBcJ_T0099645.1 MGP_BALBcJ_G0037681.1 mouse_genomes_project 19 34520813 34520916 - Gm25268 snRNA snRNA MGP_BALBcJ_T0099646.1 MGP_BALBcJ_G0037682.1 mouse_genomes_project 19 34769242 34769348 + Gm23026 snRNA snRNA MGP_BALBcJ_T0007052.1 MGP_BALBcJ_G0005790.1 mouse_genomes_project 19 21080560 21082267 + 1700021P04Rik lincRNA lincRNA MGP_BALBcJ_T0050336.1 MGP_BALBcJ_G0024615.1 mouse_genomes_project 19 930324 936252 + MGP_BALBcJ_P0050336 Gpr152 protein_coding protein_coding MGP_BALBcJ_T0051229.1 MGP_BALBcJ_G0024912.1 mouse_genomes_project 19 10317711 10318656 - MGP_BALBcJ_P0051229 Olfr1472 protein_coding protein_coding MGP_BALBcJ_T0051227.1 MGP_BALBcJ_G0024910.1 mouse_genomes_project 19 10263682 10264612 + MGP_BALBcJ_P0051227 Olfr1469 protein_coding protein_coding MGP_BALBcJ_T0051842.1 MGP_BALBcJ_G0025139.1 mouse_genomes_project 19 41711387 41726340 + MGP_BALBcJ_P0051842 Scd2 protein_coding protein_coding MGP_BALBcJ_T0051843.1 MGP_BALBcJ_G0025139.1 mouse_genomes_project 19 41712099 41726340 + MGP_BALBcJ_P0051843 Scd2 protein_coding unknown_likely_coding MGP_BALBcJ_T0098559.1 MGP_BALBcJ_G0036613.1 mouse_genomes_project 19 3004658 3004778 + n-R5s19 rRNA rRNA MGP_BALBcJ_T0052018.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45004347 45040427 - MGP_BALBcJ_P0052018 Obfc1 protein_coding protein_coding MGP_BALBcJ_T0052019.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45004352 45012071 - Obfc1 protein_coding processed_transcript MGP_BALBcJ_T0052020.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45010502 45040344 - MGP_BALBcJ_P0052020 Obfc1 protein_coding protein_coding MGP_BALBcJ_T0052021.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45025468 45040272 - Obfc1 protein_coding processed_transcript MGP_BALBcJ_T0052022.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45027417 45040204 - Obfc1 protein_coding processed_transcript MGP_BALBcJ_T0052023.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45027546 45040402 - Obfc1 protein_coding retained_intron MGP_BALBcJ_T0052024.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45028051 45040938 - MGP_BALBcJ_P0052024 Obfc1 protein_coding protein_coding MGP_BALBcJ_T0052025.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45035652 45039570 - Obfc1 protein_coding processed_transcript MGP_BALBcJ_T0052026.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45039222 45040354 - Obfc1 protein_coding retained_intron MGP_BALBcJ_T0052027.1 MGP_BALBcJ_G0025201.1 mouse_genomes_project 19 45039597 45040332 - Obfc1 protein_coding processed_transcript MGP_BALBcJ_T0052191.1 MGP_BALBcJ_G0025244.1 mouse_genomes_project 19 54997970 55026552 + MGP_BALBcJ_P0052191 Fam160b1 protein_coding protein_coding MGP_BALBcJ_T0050955.1 MGP_BALBcJ_G0024783.1 mouse_genomes_project 19 5908376 5911501 + MGP_BALBcJ_P0050955 Lrrn4cl protein_coding protein_coding MGP_BALBcJ_T0051726.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39321122 39361559 - MGP_BALBcJ_P0051726 Mms19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051727.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39321122 39361602 - MGP_BALBcJ_P0051727 Mms19 protein_coding protein_coding MGP_BALBcJ_T0051728.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324263 39344691 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051729.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324267 39350171 - MGP_BALBcJ_P0051729 Mms19 protein_coding protein_coding MGP_BALBcJ_T0051730.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324269 39361581 - MGP_BALBcJ_P0051730 Mms19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051731.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324269 39361562 - MGP_BALBcJ_P0051731 Mms19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051732.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324435 39361577 - MGP_BALBcJ_P0051732 Mms19 protein_coding protein_coding MGP_BALBcJ_T0051733.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324547 39335198 - MGP_BALBcJ_P0051733 Mms19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051734.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39324607 39325686 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051735.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39326880 39361584 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051736.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39327068 39334005 - MGP_BALBcJ_P0051736 Mms19 protein_coding protein_coding MGP_BALBcJ_T0051737.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39327253 39328321 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051738.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39327763 39361582 - MGP_BALBcJ_P0051738 Mms19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051739.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39329785 39331403 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051740.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39333157 39361575 - MGP_BALBcJ_P0051740 Mms19 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051741.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39334516 39335227 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051742.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39342852 39343180 - Mms19 protein_coding retained_intron MGP_BALBcJ_T0051743.1 MGP_BALBcJ_G0025104.1 mouse_genomes_project 19 39343060 39350190 - MGP_BALBcJ_P0051743 Mms19 protein_coding protein_coding MGP_BALBcJ_T0051873.1 MGP_BALBcJ_G0025151.1 mouse_genomes_project 19 42454506 42460791 + MGP_BALBcJ_P0051873 Peo1 protein_coding protein_coding MGP_BALBcJ_T0052007.1 MGP_BALBcJ_G0025193.1 mouse_genomes_project 19 44568467 44575538 - MGP_BALBcJ_P0052007 Usmg5 protein_coding protein_coding MGP_BALBcJ_T0051163.1 MGP_BALBcJ_G0024861.1 mouse_genomes_project 19 8707531 8709066 - MGP_BALBcJ_P0051163 protein_coding protein_coding MGP_BALBcJ_T0051203.1 MGP_BALBcJ_G0024888.1 mouse_genomes_project 19 9610737 9645952 - MGP_BALBcJ_P0051203 Zfp91 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051205.1 MGP_BALBcJ_G0024888.1 mouse_genomes_project 19 9614097 9645952 - MGP_BALBcJ_P0051205 Zfp91 protein_coding protein_coding MGP_BALBcJ_T0051206.1 MGP_BALBcJ_G0024888.1 mouse_genomes_project 19 9618593 9639661 - Zfp91 protein_coding retained_intron MGP_BALBcJ_T0050453.1 MGP_BALBcJ_G0024651.1 mouse_genomes_project 19 1838987 1846957 + MGP_BALBcJ_P0050453 Slc29a2 protein_coding protein_coding MGP_BALBcJ_T0051035.1 MGP_BALBcJ_G0024816.1 mouse_genomes_project 19 7386903 7409350 - MGP_BALBcJ_P0051035 Tmem216 protein_coding protein_coding MGP_BALBcJ_T0051036.1 MGP_BALBcJ_G0024816.1 mouse_genomes_project 19 7392447 7409365 - MGP_BALBcJ_P0051036 Tmem216 protein_coding protein_coding MGP_BALBcJ_T0051037.1 MGP_BALBcJ_G0024816.1 mouse_genomes_project 19 7404073 7409852 - MGP_BALBcJ_P0051037 Tmem216 protein_coding protein_coding MGP_BALBcJ_T0051038.1 MGP_BALBcJ_G0024816.1 mouse_genomes_project 19 7404104 7409365 - MGP_BALBcJ_P0051038 Tmem216 protein_coding protein_coding MGP_BALBcJ_T0051039.1 MGP_BALBcJ_G0024816.1 mouse_genomes_project 19 7404162 7409365 - MGP_BALBcJ_P0051039 Tmem216 protein_coding protein_coding MGP_BALBcJ_T0051040.1 MGP_BALBcJ_G0024816.1 mouse_genomes_project 19 7408360 7409365 - Tmem216 protein_coding retained_intron MGP_BALBcJ_T0052246.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58734205 58825336 - MGP_BALBcJ_P0052246 Zfp950 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052247.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58795730 58825381 - MGP_BALBcJ_P0052247 Zfp950 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052248.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58797286 58798121 - Zfp950 protein_coding retained_intron MGP_BALBcJ_T0052249.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58797871 58825358 - MGP_BALBcJ_P0052249 Zfp950 protein_coding protein_coding MGP_BALBcJ_T0052250.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58797890 58825360 - MGP_BALBcJ_P0052250 Zfp950 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052251.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58798021 58825311 - MGP_BALBcJ_P0052251 Zfp950 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052252.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58798879 58825303 - MGP_BALBcJ_P0052252 Zfp950 protein_coding protein_coding MGP_BALBcJ_T0052253.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58800183 58800354 - MGP_BALBcJ_P0052253 Zfp950 protein_coding protein_coding MGP_BALBcJ_T0052254.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58807774 58825331 - MGP_BALBcJ_P0052254 Zfp950 protein_coding protein_coding MGP_BALBcJ_T0052255.1 MGP_BALBcJ_G0025271.1 mouse_genomes_project 19 58812783 58813347 - MGP_BALBcJ_P0052255 Zfp950 protein_coding protein_coding MGP_BALBcJ_T0007046.1 MGP_BALBcJ_G0005785.1 mouse_genomes_project 19 8324558 8326364 + Gm37387 lincRNA lincRNA MGP_BALBcJ_T0051579.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34306250 34494413 - MGP_BALBcJ_P0051579 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051580.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34306256 34460792 - MGP_BALBcJ_P0051580 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051581.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34306838 34494413 - MGP_BALBcJ_P0051581 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051582.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34306838 34462760 - MGP_BALBcJ_P0051582 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051583.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34307929 34494424 - MGP_BALBcJ_P0051583 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051584.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34308891 34494244 - MGP_BALBcJ_P0051584 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051585.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34309595 34485203 - MGP_BALBcJ_P0051585 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051586.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34338800 34494459 - MGP_BALBcJ_P0051586 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051587.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34461133 34464712 - MGP_BALBcJ_P0051587 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051588.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34461289 34462753 - MGP_BALBcJ_P0051588 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051589.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34461319 34495552 - MGP_BALBcJ_P0051589 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051590.1 MGP_BALBcJ_G0025051.1 mouse_genomes_project 19 34461384 34461913 - MGP_BALBcJ_P0051590 Cpeb3 protein_coding protein_coding MGP_BALBcJ_T0051148.1 MGP_BALBcJ_G0024854.1 mouse_genomes_project 19 8509976 8521278 - MGP_BALBcJ_P0051148 Ms4a3 protein_coding protein_coding MGP_BALBcJ_T0051149.1 MGP_BALBcJ_G0024854.1 mouse_genomes_project 19 8509979 8521307 - MGP_BALBcJ_P0051149 Ms4a3 protein_coding protein_coding MGP_BALBcJ_T0051150.1 MGP_BALBcJ_G0024854.1 mouse_genomes_project 19 8512379 8521324 - Ms4a3 protein_coding retained_intron MGP_BALBcJ_T0051140.1 MGP_BALBcJ_G0024852.1 mouse_genomes_project 19 8468733 8477465 - Ms4a6d protein_coding processed_transcript MGP_BALBcJ_T0051141.1 MGP_BALBcJ_G0024852.1 mouse_genomes_project 19 8468839 8482529 - MGP_BALBcJ_P0051141 Ms4a6d protein_coding protein_coding MGP_BALBcJ_T0051142.1 MGP_BALBcJ_G0024852.1 mouse_genomes_project 19 8469720 8477559 - Ms4a6d protein_coding retained_intron MGP_BALBcJ_T0010286.1 MGP_BALBcJ_G0008411.1 mouse_genomes_project 19 30333384 30333474 + Mir3970 miRNA miRNA MGP_BALBcJ_T0050855.1 MGP_BALBcJ_G0024759.1 mouse_genomes_project 19 4315714 4375267 - MGP_BALBcJ_P0050855 Rtn3 protein_coding protein_coding MGP_BALBcJ_T0050856.1 MGP_BALBcJ_G0024759.1 mouse_genomes_project 19 4315714 4375267 - MGP_BALBcJ_P0050856 Rtn3 protein_coding protein_coding MGP_BALBcJ_T0050857.1 MGP_BALBcJ_G0024759.1 mouse_genomes_project 19 4315714 4375259 - MGP_BALBcJ_P0050857 Rtn3 protein_coding protein_coding MGP_BALBcJ_T0050858.1 MGP_BALBcJ_G0024759.1 mouse_genomes_project 19 4316841 4375197 - MGP_BALBcJ_P0050858 Rtn3 protein_coding protein_coding MGP_BALBcJ_T0051331.1 MGP_BALBcJ_G0024962.1 mouse_genomes_project 19 20574923 20670078 - MGP_BALBcJ_P0051331 1700028P14Rik protein_coding protein_coding MGP_BALBcJ_T0051634.1 MGP_BALBcJ_G0025068.1 mouse_genomes_project 19 36136055 36167715 - MGP_BALBcJ_P0051634 Noc3l protein_coding protein_coding MGP_BALBcJ_T0051409.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 25982966 26001659 - MGP_BALBcJ_P0051409 4430402I18Rik protein_coding protein_coding MGP_BALBcJ_T0051411.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 25991019 26059204 - MGP_BALBcJ_P0051411 4430402I18Rik protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051412.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 26013062 26055628 - MGP_BALBcJ_P0051412 4430402I18Rik protein_coding protein_coding MGP_BALBcJ_T0051413.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 26013528 26059274 - MGP_BALBcJ_P0051413 4430402I18Rik protein_coding protein_coding MGP_BALBcJ_T0051414.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 26013531 26019226 - 4430402I18Rik protein_coding processed_transcript MGP_BALBcJ_T0051415.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 26013686 26055053 - MGP_BALBcJ_P0051415 4430402I18Rik protein_coding protein_coding MGP_BALBcJ_T0051416.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 26013686 26055053 - MGP_BALBcJ_P0051416 4430402I18Rik protein_coding protein_coding MGP_BALBcJ_T0051417.1 MGP_BALBcJ_G0024989.1 mouse_genomes_project 19 26039510 26055382 - MGP_BALBcJ_P0051417 4430402I18Rik protein_coding protein_coding MGP_BALBcJ_T0050436.1 MGP_BALBcJ_G0024645.1 mouse_genomes_project 19 1691153 1697859 + Zdhhc24 protein_coding processed_transcript MGP_BALBcJ_T0050437.1 MGP_BALBcJ_G0024645.1 mouse_genomes_project 19 1691157 1697859 + MGP_BALBcJ_P0050437 Zdhhc24 protein_coding protein_coding MGP_BALBcJ_T0050438.1 MGP_BALBcJ_G0024645.1 mouse_genomes_project 19 1691175 1697857 + Zdhhc24 protein_coding processed_transcript MGP_BALBcJ_T0050439.1 MGP_BALBcJ_G0024645.1 mouse_genomes_project 19 1691189 1697858 + MGP_BALBcJ_P0050439 Zdhhc24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050440.1 MGP_BALBcJ_G0024645.1 mouse_genomes_project 19 1691208 1696241 + MGP_BALBcJ_P0050440 Zdhhc24 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050441.1 MGP_BALBcJ_G0024645.1 mouse_genomes_project 19 1692253 1696224 + Zdhhc24 protein_coding processed_transcript MGP_BALBcJ_T0011461.1 MGP_BALBcJ_G0009586.1 mouse_genomes_project 19 35805269 35805352 - Gm24930 misc_RNA misc_RNA MGP_BALBcJ_T0050587.1 MGP_BALBcJ_G0024700.1 mouse_genomes_project 19 2783122 2808197 - MGP_BALBcJ_P0050587 Pola2 protein_coding protein_coding MGP_BALBcJ_T0050588.1 MGP_BALBcJ_G0024700.1 mouse_genomes_project 19 2785252 2808197 - MGP_BALBcJ_P0050588 Pola2 protein_coding protein_coding MGP_BALBcJ_T0051476.1 MGP_BALBcJ_G0025009.1 mouse_genomes_project 19 27344982 27351854 + MGP_BALBcJ_P0051476 Mbl2 protein_coding protein_coding MGP_BALBcJ_T0051220.1 MGP_BALBcJ_G0024903.1 mouse_genomes_project 19 9993193 9994294 - MGP_BALBcJ_P0051220 Olfr1459 protein_coding protein_coding MGP_BALBcJ_T0102377.1 MGP_BALBcJ_G0040193.1 mouse_genomes_project 19 31092534 31095214 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0050971.1 MGP_BALBcJ_G0024789.1 mouse_genomes_project 19 5958639 5977182 + MGP_BALBcJ_P0050971 Ganab protein_coding protein_coding MGP_BALBcJ_T0050972.1 MGP_BALBcJ_G0024789.1 mouse_genomes_project 19 5958671 5977188 + MGP_BALBcJ_P0050972 Ganab protein_coding unknown_likely_coding MGP_BALBcJ_T0051328.1 MGP_BALBcJ_G0024960.1 mouse_genomes_project 19 20215345 20285900 - MGP_BALBcJ_P0051328 Smc5 protein_coding protein_coding MGP_BALBcJ_T0051329.1 MGP_BALBcJ_G0024960.1 mouse_genomes_project 19 20215355 20224062 - MGP_BALBcJ_P0051329 Smc5 protein_coding unknown_likely_coding MGP_BALBcJ_T0010265.1 MGP_BALBcJ_G0008390.1 mouse_genomes_project 19 2903285 2903344 + Mir6988 miRNA miRNA MGP_BALBcJ_T0051261.1 MGP_BALBcJ_G0024935.1 mouse_genomes_project 19 13398248 13576591 + MGP_BALBcJ_P0051261 Gna14 protein_coding protein_coding MGP_BALBcJ_T0051912.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43254209 43256617 - MGP_BALBcJ_P0051912 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051913.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43254663 43280095 - Kcnip2 protein_coding retained_intron MGP_BALBcJ_T0051914.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43254663 43280095 - MGP_BALBcJ_P0051914 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051915.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43254663 43280134 - MGP_BALBcJ_P0051915 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051916.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43255666 43276367 - MGP_BALBcJ_P0051916 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051917.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43255765 43280098 - MGP_BALBcJ_P0051917 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051918.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43255987 43258939 - MGP_BALBcJ_P0051918 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051919.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43255987 43279906 - MGP_BALBcJ_P0051919 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051920.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43256308 43279876 - MGP_BALBcJ_P0051920 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051921.1 MGP_BALBcJ_G0025165.1 mouse_genomes_project 19 43257904 43260278 - MGP_BALBcJ_P0051921 Kcnip2 protein_coding protein_coding MGP_BALBcJ_T0051540.1 MGP_BALBcJ_G0025037.1 mouse_genomes_project 19 31875663 31888448 - MGP_BALBcJ_P0051540 Ifit1bl2 protein_coding protein_coding MGP_BALBcJ_T0051541.1 MGP_BALBcJ_G0025037.1 mouse_genomes_project 19 31875665 31900267 - MGP_BALBcJ_P0051541 Ifit1bl2 protein_coding protein_coding MGP_BALBcJ_T0051755.1 MGP_BALBcJ_G0025112.1 mouse_genomes_project 19 39540957 39545279 + MGP_BALBcJ_P0051755 Marveld1 protein_coding protein_coding MGP_BALBcJ_T0051756.1 MGP_BALBcJ_G0025112.1 mouse_genomes_project 19 39541283 39545038 + MGP_BALBcJ_P0051756 Marveld1 protein_coding protein_coding MGP_BALBcJ_T0098750.1 MGP_BALBcJ_G0036804.1 mouse_genomes_project 19 8571975 8572114 + Gm26183 scaRNA scaRNA MGP_BALBcJ_T0050576.1 MGP_BALBcJ_G0024697.1 mouse_genomes_project 19 2727234 2730203 - MGP_BALBcJ_P0050576 Tigd3 protein_coding protein_coding MGP_BALBcJ_T0051484.1 MGP_BALBcJ_G0025012.1 mouse_genomes_project 19 28215825 28219575 + MGP_BALBcJ_P0051484 Cstf2t protein_coding protein_coding MGP_BALBcJ_T0007045.1 MGP_BALBcJ_G0005784.1 mouse_genomes_project 19 8217636 8219297 + Gm28935 lincRNA lincRNA MGP_BALBcJ_T0003824.1 MGP_BALBcJ_G0003431.1 mouse_genomes_project 19 790823 791298 - Gm16312 antisense antisense MGP_BALBcJ_T0050497.1 MGP_BALBcJ_G0024674.1 mouse_genomes_project 19 2289008 2293452 + MGP_BALBcJ_P0050497 Fibp protein_coding protein_coding MGP_BALBcJ_T0050498.1 MGP_BALBcJ_G0024674.1 mouse_genomes_project 19 2289095 2293457 + MGP_BALBcJ_P0050498 Fibp protein_coding unknown_likely_coding MGP_BALBcJ_T0051604.1 MGP_BALBcJ_G0025059.1 mouse_genomes_project 19 35203931 35369744 - MGP_BALBcJ_P0051604 Myof protein_coding protein_coding MGP_BALBcJ_T0051605.1 MGP_BALBcJ_G0025059.1 mouse_genomes_project 19 35203931 35369744 - MGP_BALBcJ_P0051605 Myof protein_coding protein_coding MGP_BALBcJ_T0051606.1 MGP_BALBcJ_G0025059.1 mouse_genomes_project 19 35204624 35369488 - MGP_BALBcJ_P0051606 Myof protein_coding unknown_likely_coding MGP_BALBcJ_T0050467.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1928668 1940349 - MGP_BALBcJ_P0050467 Klc2 protein_coding protein_coding MGP_BALBcJ_T0050468.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1928668 1940089 - MGP_BALBcJ_P0050468 Klc2 protein_coding protein_coding MGP_BALBcJ_T0050469.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1928668 1940086 - MGP_BALBcJ_P0050469 Klc2 protein_coding protein_coding MGP_BALBcJ_T0050470.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1928670 1940087 - MGP_BALBcJ_P0050470 Klc2 protein_coding protein_coding MGP_BALBcJ_T0050471.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1929984 1931312 - Klc2 protein_coding retained_intron MGP_BALBcJ_T0050472.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1931258 1933280 - Klc2 protein_coding retained_intron MGP_BALBcJ_T0050473.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1932201 1933819 - Klc2 protein_coding retained_intron MGP_BALBcJ_T0050474.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1935344 1935845 - Klc2 protein_coding retained_intron MGP_BALBcJ_T0050475.1 MGP_BALBcJ_G0024660.1 mouse_genomes_project 19 1935644 1939375 - MGP_BALBcJ_P0050475 Klc2 protein_coding protein_coding MGP_BALBcJ_T0051489.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29262626 29303087 - MGP_BALBcJ_P0051489 protein_coding unknown_likely_coding MGP_BALBcJ_T0051490.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29264049 29417414 - MGP_BALBcJ_P0051490 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051491.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29264051 29300400 - MGP_BALBcJ_P0051491 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051492.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29298432 29533070 - protein_coding retained_intron MGP_BALBcJ_T0051493.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29300237 29341185 - MGP_BALBcJ_P0051493 protein_coding protein_coding MGP_BALBcJ_T0051494.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29300334 29376724 - protein_coding processed_transcript MGP_BALBcJ_T0051495.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29300346 29464175 - protein_coding processed_transcript MGP_BALBcJ_T0051496.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29300475 29417388 - protein_coding processed_transcript MGP_BALBcJ_T0051497.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29357325 29387531 - protein_coding processed_transcript MGP_BALBcJ_T0051498.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29359715 29430049 - protein_coding retained_intron MGP_BALBcJ_T0051499.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29362446 29376738 - protein_coding retained_intron MGP_BALBcJ_T0051500.1 MGP_BALBcJ_G0025015.1 mouse_genomes_project 19 29429748 29531824 - protein_coding retained_intron MGP_BALBcJ_T0050814.1 MGP_BALBcJ_G0024747.1 mouse_genomes_project 19 3870153 3873067 + MGP_BALBcJ_P0050814 Trpt1 protein_coding protein_coding MGP_BALBcJ_T0050793.1 MGP_BALBcJ_G0024739.1 mouse_genomes_project 19 3808518 3811957 - MGP_BALBcJ_P0050793 Gpr137 protein_coding protein_coding MGP_BALBcJ_T0050794.1 MGP_BALBcJ_G0024739.1 mouse_genomes_project 19 3808519 3812900 - MGP_BALBcJ_P0050794 Gpr137 protein_coding protein_coding MGP_BALBcJ_T0050795.1 MGP_BALBcJ_G0024739.1 mouse_genomes_project 19 3808519 3811643 - MGP_BALBcJ_P0050795 Gpr137 protein_coding protein_coding MGP_BALBcJ_T0050796.1 MGP_BALBcJ_G0024739.1 mouse_genomes_project 19 3808519 3811929 - MGP_BALBcJ_P0050796 Gpr137 protein_coding protein_coding MGP_BALBcJ_T0050797.1 MGP_BALBcJ_G0024739.1 mouse_genomes_project 19 3808519 3811643 - MGP_BALBcJ_P0050797 Gpr137 protein_coding protein_coding MGP_BALBcJ_T0052105.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53365862 53561311 + MGP_BALBcJ_P0052105 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052106.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53365862 53561311 + MGP_BALBcJ_P0052106 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052107.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53365872 53560886 + MGP_BALBcJ_P0052107 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052108.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53365872 53560909 + MGP_BALBcJ_P0052108 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052109.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53365936 53560354 + MGP_BALBcJ_P0052109 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052110.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53365936 53552987 + MGP_BALBcJ_P0052110 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052111.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366107 53559848 + MGP_BALBcJ_P0052111 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052112.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366291 53540568 + MGP_BALBcJ_P0052112 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052113.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366292 53540568 + MGP_BALBcJ_P0052113 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052114.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366292 53540567 + MGP_BALBcJ_P0052114 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052115.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366320 53538394 + Tcf7l2 protein_coding retained_intron MGP_BALBcJ_T0052116.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366320 53552984 + MGP_BALBcJ_P0052116 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052117.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366369 53561311 + MGP_BALBcJ_P0052117 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052118.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366401 53560888 + MGP_BALBcJ_P0052118 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052119.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53366505 53559848 + MGP_BALBcJ_P0052119 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052120.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53521227 53547383 + Tcf7l2 protein_coding processed_transcript MGP_BALBcJ_T0052121.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53522409 53546731 + MGP_BALBcJ_P0052121 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052122.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53523385 53560886 + MGP_BALBcJ_P0052122 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0052123.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53523537 53540482 + Tcf7l2 protein_coding processed_transcript MGP_BALBcJ_T0052124.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53526173 53546806 + Tcf7l2 protein_coding processed_transcript MGP_BALBcJ_T0052125.1 MGP_BALBcJ_G0025231.1 mouse_genomes_project 19 53526417 53547369 + MGP_BALBcJ_P0052125 Tcf7l2 protein_coding protein_coding MGP_BALBcJ_T0099648.1 MGP_BALBcJ_G0037684.1 mouse_genomes_project 19 41274445 41274552 - Gm24400 snRNA snRNA MGP_BALBcJ_T0052228.1 MGP_BALBcJ_G0025263.1 mouse_genomes_project 19 58135411 58136977 - MGP_BALBcJ_P0052228 Prlhr protein_coding protein_coding MGP_BALBcJ_T0013374.1 MGP_BALBcJ_G0011471.1 mouse_genomes_project 19 40677947 40680398 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050679.1 MGP_BALBcJ_G0024724.1 mouse_genomes_project 19 3169941 3189436 + MGP_BALBcJ_P0050679 Cdc42bpg protein_coding protein_coding MGP_BALBcJ_T0050680.1 MGP_BALBcJ_G0024724.1 mouse_genomes_project 19 3185591 3186016 + Cdc42bpg protein_coding retained_intron MGP_BALBcJ_T0051893.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43032993 43116606 - MGP_BALBcJ_P0051893 Fbxw4 protein_coding protein_coding MGP_BALBcJ_T0051895.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43033358 43048196 - MGP_BALBcJ_P0051895 Fbxw4 protein_coding protein_coding MGP_BALBcJ_T0051896.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43033539 43046571 - MGP_BALBcJ_P0051896 Fbxw4 protein_coding protein_coding MGP_BALBcJ_T0051897.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43033541 43034635 - Fbxw4 protein_coding retained_intron MGP_BALBcJ_T0051898.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43033585 43046571 - MGP_BALBcJ_P0051898 Fbxw4 protein_coding protein_coding MGP_BALBcJ_T0051899.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43033656 43047390 - MGP_BALBcJ_P0051899 Fbxw4 protein_coding protein_coding MGP_BALBcJ_T0051900.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43034506 43086577 - Fbxw4 protein_coding retained_intron MGP_BALBcJ_T0051901.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43046189 43086577 - Fbxw4 protein_coding retained_intron MGP_BALBcJ_T0051902.1 MGP_BALBcJ_G0025161.1 mouse_genomes_project 19 43086312 43096359 - MGP_BALBcJ_P0051902 Fbxw4 protein_coding protein_coding MGP_BALBcJ_T0051644.1 MGP_BALBcJ_G0025073.1 mouse_genomes_project 19 36472393 36533833 + MGP_BALBcJ_P0051644 Cyp2c66 protein_coding protein_coding MGP_BALBcJ_T0051645.1 MGP_BALBcJ_G0025073.1 mouse_genomes_project 19 36472405 36534152 + MGP_BALBcJ_P0051645 Cyp2c66 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050358.1 MGP_BALBcJ_G0024620.1 mouse_genomes_project 19 976304 983579 - MGP_BALBcJ_P0050358 Tbc1d10c protein_coding protein_coding MGP_BALBcJ_T0050577.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2732611 2756296 - MGP_BALBcJ_P0050577 Dpf2 protein_coding protein_coding MGP_BALBcJ_T0050578.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2733482 2756217 - MGP_BALBcJ_P0050578 Dpf2 protein_coding protein_coding MGP_BALBcJ_T0050579.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2733482 2750559 - MGP_BALBcJ_P0050579 Dpf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050580.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2736885 2746832 - Dpf2 protein_coding retained_intron MGP_BALBcJ_T0050581.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2742823 2745941 - Dpf2 protein_coding retained_intron MGP_BALBcJ_T0050582.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2747646 2756202 - Dpf2 protein_coding retained_intron MGP_BALBcJ_T0050583.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2748625 2756194 - Dpf2 protein_coding retained_intron MGP_BALBcJ_T0050584.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2749036 2756435 - Dpf2 protein_coding processed_transcript MGP_BALBcJ_T0050585.1 MGP_BALBcJ_G0024698.1 mouse_genomes_project 19 2755250 2756232 - Dpf2 protein_coding processed_transcript MGP_BALBcJ_T0010282.1 MGP_BALBcJ_G0008407.1 mouse_genomes_project 19 19745962 19746030 + Mir204 miRNA miRNA MGP_BALBcJ_T0003837.1 MGP_BALBcJ_G0003438.1 mouse_genomes_project 19 3409890 3411019 - Gm14967 antisense antisense MGP_BALBcJ_T0010310.1 MGP_BALBcJ_G0008435.1 mouse_genomes_project 19 58256370 58256459 + Gm25238 miRNA miRNA MGP_BALBcJ_T0010300.1 MGP_BALBcJ_G0008425.1 mouse_genomes_project 19 43818231 43818340 + Mir146b miRNA miRNA MGP_BALBcJ_T0013370.1 MGP_BALBcJ_G0011467.1 mouse_genomes_project 19 27272116 27272494 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050912.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5813281 5827664 + MGP_BALBcJ_P0050912 Nxf1 protein_coding protein_coding MGP_BALBcJ_T0050913.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5813315 5829188 + MGP_BALBcJ_P0050913 Nxf1 protein_coding protein_coding MGP_BALBcJ_T0050914.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5813327 5824355 + Nxf1 protein_coding processed_transcript MGP_BALBcJ_T0050915.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5813358 5822033 + MGP_BALBcJ_P0050915 Nxf1 protein_coding protein_coding MGP_BALBcJ_T0050916.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5813358 5820481 + MGP_BALBcJ_P0050916 Nxf1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050917.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5821675 5824138 + MGP_BALBcJ_P0050917 Nxf1 protein_coding protein_coding MGP_BALBcJ_T0050918.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5823418 5825909 + Nxf1 protein_coding retained_intron MGP_BALBcJ_T0050919.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5823752 5824629 + Nxf1 protein_coding retained_intron MGP_BALBcJ_T0050920.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5825376 5827591 + MGP_BALBcJ_P0050920 Nxf1 protein_coding protein_coding MGP_BALBcJ_T0050921.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5826833 5827663 + Nxf1 protein_coding processed_transcript MGP_BALBcJ_T0050922.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5826877 5827604 + Nxf1 protein_coding retained_intron MGP_BALBcJ_T0050923.1 MGP_BALBcJ_G0024775.1 mouse_genomes_project 19 5827737 5829207 + MGP_BALBcJ_P0050923 Nxf1 protein_coding protein_coding MGP_BALBcJ_T0007053.1 MGP_BALBcJ_G0005791.1 mouse_genomes_project 19 22727446 22728552 - 2610016A17Rik lincRNA lincRNA MGP_BALBcJ_T0007054.1 MGP_BALBcJ_G0005791.1 mouse_genomes_project 19 22727484 22728535 - 2610016A17Rik lincRNA lincRNA MGP_BALBcJ_T0007055.1 MGP_BALBcJ_G0005791.1 mouse_genomes_project 19 22727877 22728566 - 2610016A17Rik lincRNA lincRNA MGP_BALBcJ_T0050944.1 MGP_BALBcJ_G0024781.1 mouse_genomes_project 19 5894561 5896882 - MGP_BALBcJ_P0050944 Gng3 protein_coding protein_coding MGP_BALBcJ_T0051724.1 MGP_BALBcJ_G0025103.1 mouse_genomes_project 19 39313446 39324154 + MGP_BALBcJ_P0051724 Zdhhc16 protein_coding protein_coding MGP_BALBcJ_T0051725.1 MGP_BALBcJ_G0025103.1 mouse_genomes_project 19 39313471 39324162 + MGP_BALBcJ_P0051725 Zdhhc16 protein_coding unknown_likely_coding MGP_BALBcJ_T0050286.1 MGP_BALBcJ_G0024601.1 mouse_genomes_project 19 760584 771709 + MGP_BALBcJ_P0050286 Aldh3b2 protein_coding protein_coding MGP_BALBcJ_T0051745.1 MGP_BALBcJ_G0025106.1 mouse_genomes_project 19 39421579 39430696 + MGP_BALBcJ_P0051745 Ankrd2 protein_coding protein_coding MGP_BALBcJ_T0052194.1 MGP_BALBcJ_G0025246.1 mouse_genomes_project 19 55245589 55780806 + MGP_BALBcJ_P0052194 Atrnl1 protein_coding protein_coding MGP_BALBcJ_T0051803.1 MGP_BALBcJ_G0025127.1 mouse_genomes_project 19 41140890 41164456 - MGP_BALBcJ_P0051803 Cox15 protein_coding protein_coding MGP_BALBcJ_T0051804.1 MGP_BALBcJ_G0025127.1 mouse_genomes_project 19 41145722 41151447 - Cox15 protein_coding retained_intron MGP_BALBcJ_T0050786.1 MGP_BALBcJ_G0024736.1 mouse_genomes_project 19 3781777 3792370 - MGP_BALBcJ_P0050786 Esrra protein_coding protein_coding MGP_BALBcJ_T0050787.1 MGP_BALBcJ_G0024736.1 mouse_genomes_project 19 3783252 3792323 - MGP_BALBcJ_P0050787 Esrra protein_coding protein_coding MGP_BALBcJ_T0050788.1 MGP_BALBcJ_G0024736.1 mouse_genomes_project 19 3783565 3792375 - Esrra protein_coding processed_transcript MGP_BALBcJ_T0050789.1 MGP_BALBcJ_G0024736.1 mouse_genomes_project 19 3790466 3792329 - Esrra protein_coding retained_intron MGP_BALBcJ_T0050790.1 MGP_BALBcJ_G0024736.1 mouse_genomes_project 19 3790640 3791613 - MGP_BALBcJ_P0050790 Esrra protein_coding protein_coding MGP_BALBcJ_T0051225.1 MGP_BALBcJ_G0024908.1 mouse_genomes_project 19 10196785 10197718 + MGP_BALBcJ_P0051225 Olfr1466 protein_coding protein_coding MGP_BALBcJ_T0051531.1 MGP_BALBcJ_G0025031.1 mouse_genomes_project 19 31717566 31718916 - MGP_BALBcJ_P0051531 Ch25h protein_coding protein_coding MGP_BALBcJ_T0051757.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39557765 39571536 + Zfyve27 protein_coding retained_intron MGP_BALBcJ_T0051758.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39564378 39588401 + MGP_BALBcJ_P0051758 Zfyve27 protein_coding protein_coding MGP_BALBcJ_T0051759.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39564405 39585525 + MGP_BALBcJ_P0051759 Zfyve27 protein_coding protein_coding MGP_BALBcJ_T0051760.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39564511 39567018 + Zfyve27 protein_coding retained_intron MGP_BALBcJ_T0051761.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39572632 39577969 + MGP_BALBcJ_P0051761 Zfyve27 protein_coding protein_coding MGP_BALBcJ_T0051762.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39577294 39578638 + Zfyve27 protein_coding retained_intron MGP_BALBcJ_T0051763.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39579144 39584322 + Zfyve27 protein_coding retained_intron MGP_BALBcJ_T0051764.1 MGP_BALBcJ_G0025113.1 mouse_genomes_project 19 39579418 39584702 + Zfyve27 protein_coding retained_intron MGP_BALBcJ_T0052013.1 MGP_BALBcJ_G0025198.1 mouse_genomes_project 19 44664591 44665257 - MGP_BALBcJ_P0052013 Gm6970 protein_coding protein_coding MGP_BALBcJ_T0001011.1 MGP_BALBcJ_G0000939.1 mouse_genomes_project 19 8464665 8466197 - TEC TEC MGP_BALBcJ_T0051195.1 MGP_BALBcJ_G0024886.1 mouse_genomes_project 19 9514260 9519938 + MGP_BALBcJ_P0051195 Olfr1443 protein_coding protein_coding MGP_BALBcJ_T0051330.1 MGP_BALBcJ_G0024961.1 mouse_genomes_project 19 20315927 20465436 - MGP_BALBcJ_P0051330 Mamdc2 protein_coding protein_coding MGP_BALBcJ_T0099651.1 MGP_BALBcJ_G0037687.1 mouse_genomes_project 19 45220822 45220926 - Gm24805 snRNA snRNA MGP_BALBcJ_T0102376.1 MGP_BALBcJ_G0040192.1 mouse_genomes_project 19 30642318 30720272 - unprocessed_pseudogene unprocessed_pseudogene MGP_BALBcJ_T0051231.1 MGP_BALBcJ_G0024914.1 mouse_genomes_project 19 10365003 10365948 - MGP_BALBcJ_P0051231 Olfr1475 protein_coding protein_coding MGP_BALBcJ_T0050776.1 MGP_BALBcJ_G0024732.1 mouse_genomes_project 19 3699579 3710965 - MGP_BALBcJ_P0050776 Rps6ka4 protein_coding protein_coding MGP_BALBcJ_T0050924.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5829253 5831199 - MGP_BALBcJ_P0050924 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050925.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831085 5843495 - MGP_BALBcJ_P0050925 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050926.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831218 5833694 - Taf6l protein_coding retained_intron MGP_BALBcJ_T0050927.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831223 5843436 - MGP_BALBcJ_P0050927 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050928.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831225 5843495 - MGP_BALBcJ_P0050928 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050929.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831227 5843596 - MGP_BALBcJ_P0050929 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050930.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831260 5841178 - MGP_BALBcJ_P0050930 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050931.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5831260 5841178 - MGP_BALBcJ_P0050931 Taf6l protein_coding protein_coding MGP_BALBcJ_T0050932.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5832168 5835988 - Taf6l protein_coding retained_intron MGP_BALBcJ_T0050933.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5834852 5843460 - Taf6l protein_coding retained_intron MGP_BALBcJ_T0050934.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5835488 5839502 - Taf6l protein_coding processed_transcript MGP_BALBcJ_T0050935.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5835514 5839856 - Taf6l protein_coding retained_intron MGP_BALBcJ_T0050936.1 MGP_BALBcJ_G0024776.1 mouse_genomes_project 19 5838989 5843444 - Taf6l protein_coding retained_intron MGP_BALBcJ_T0007078.1 MGP_BALBcJ_G0005808.1 mouse_genomes_project 19 42763296 42763834 + Gm29594 lincRNA lincRNA MGP_BALBcJ_T0051262.1 MGP_BALBcJ_G0024936.1 mouse_genomes_project 19 13582531 13748051 - MGP_BALBcJ_P0051262 Vps13a protein_coding protein_coding MGP_BALBcJ_T0051263.1 MGP_BALBcJ_G0024936.1 mouse_genomes_project 19 13598729 13747998 - MGP_BALBcJ_P0051263 Vps13a protein_coding unknown_likely_coding MGP_BALBcJ_T0051257.1 MGP_BALBcJ_G0024933.1 mouse_genomes_project 19 12908408 12935889 - MGP_BALBcJ_P0051257 Cep78 protein_coding protein_coding MGP_BALBcJ_T0050555.1 MGP_BALBcJ_G0024690.1 mouse_genomes_project 19 2540903 2561469 - MGP_BALBcJ_P0050555 Ehbp1l1 protein_coding protein_coding MGP_BALBcJ_T0050556.1 MGP_BALBcJ_G0024690.1 mouse_genomes_project 19 2540903 2561469 - MGP_BALBcJ_P0050556 Ehbp1l1 protein_coding protein_coding MGP_BALBcJ_T0052140.1 MGP_BALBcJ_G0025235.1 mouse_genomes_project 19 54086519 54112190 + MGP_BALBcJ_P0052140 Plekhs1 protein_coding protein_coding MGP_BALBcJ_T0052141.1 MGP_BALBcJ_G0025235.1 mouse_genomes_project 19 54086519 54112190 + MGP_BALBcJ_P0052141 Plekhs1 protein_coding protein_coding MGP_BALBcJ_T0052142.1 MGP_BALBcJ_G0025235.1 mouse_genomes_project 19 54089452 54111309 + MGP_BALBcJ_P0052142 Plekhs1 protein_coding unknown_likely_coding MGP_BALBcJ_T0050554.1 MGP_BALBcJ_G0024689.1 mouse_genomes_project 19 2537894 2540629 + MGP_BALBcJ_P0050554 Kcnk7 protein_coding protein_coding MGP_BALBcJ_T0050818.1 MGP_BALBcJ_G0024751.1 mouse_genomes_project 19 3978306 3992259 - MGP_BALBcJ_P0050818 Flrt1 protein_coding protein_coding MGP_BALBcJ_T0051018.1 MGP_BALBcJ_G0024809.1 mouse_genomes_project 19 7061788 7094274 - MGP_BALBcJ_P0051018 Myrf protein_coding protein_coding MGP_BALBcJ_T0051019.1 MGP_BALBcJ_G0024809.1 mouse_genomes_project 19 7062812 7094274 - Myrf protein_coding retained_intron MGP_BALBcJ_T0051020.1 MGP_BALBcJ_G0024809.1 mouse_genomes_project 19 7063211 7094271 - MGP_BALBcJ_P0051020 Myrf protein_coding protein_coding MGP_BALBcJ_T0051021.1 MGP_BALBcJ_G0024809.1 mouse_genomes_project 19 7063807 7071063 - MGP_BALBcJ_P0051021 Myrf protein_coding protein_coding MGP_BALBcJ_T0051022.1 MGP_BALBcJ_G0024809.1 mouse_genomes_project 19 7063892 7094130 - MGP_BALBcJ_P0051022 Myrf protein_coding protein_coding MGP_BALBcJ_T0051023.1 MGP_BALBcJ_G0024809.1 mouse_genomes_project 19 7079551 7094274 - Myrf protein_coding retained_intron MGP_BALBcJ_T0051127.1 MGP_BALBcJ_G0024848.1 mouse_genomes_project 19 8328677 8343363 + MGP_BALBcJ_P0051127 Ms4a6c protein_coding protein_coding MGP_BALBcJ_T0051128.1 MGP_BALBcJ_G0024848.1 mouse_genomes_project 19 8328736 8332042 + Ms4a6c protein_coding retained_intron MGP_BALBcJ_T0051866.1 MGP_BALBcJ_G0025148.1 mouse_genomes_project 19 42376953 42431402 + MGP_BALBcJ_P0051866 Fam178a protein_coding protein_coding MGP_BALBcJ_T0051867.1 MGP_BALBcJ_G0025148.1 mouse_genomes_project 19 42390919 42431665 + MGP_BALBcJ_P0051867 Fam178a protein_coding unknown_likely_coding MGP_BALBcJ_T0051418.1 MGP_BALBcJ_G0024990.1 mouse_genomes_project 19 26055426 26058285 + MGP_BALBcJ_P0051418 Plpp6 protein_coding protein_coding MGP_BALBcJ_T0051978.1 MGP_BALBcJ_G0025180.1 mouse_genomes_project 19 43872028 43965385 + MGP_BALBcJ_P0051978 Sufu protein_coding protein_coding MGP_BALBcJ_T0051979.1 MGP_BALBcJ_G0025180.1 mouse_genomes_project 19 43872050 43962626 + MGP_BALBcJ_P0051979 Sufu protein_coding protein_coding MGP_BALBcJ_T0051980.1 MGP_BALBcJ_G0025180.1 mouse_genomes_project 19 43872136 43931901 + MGP_BALBcJ_P0051980 Sufu protein_coding protein_coding MGP_BALBcJ_T0051981.1 MGP_BALBcJ_G0025180.1 mouse_genomes_project 19 43872158 43953514 + MGP_BALBcJ_P0051981 Sufu protein_coding protein_coding MGP_BALBcJ_T0051982.1 MGP_BALBcJ_G0025180.1 mouse_genomes_project 19 43934099 43952212 + Sufu protein_coding processed_transcript MGP_BALBcJ_T0051983.1 MGP_BALBcJ_G0025180.1 mouse_genomes_project 19 43959674 43962560 + Sufu protein_coding retained_intron MGP_BALBcJ_T0051797.1 MGP_BALBcJ_G0025125.1 mouse_genomes_project 19 41067178 41078192 - MGP_BALBcJ_P0051797 Slc25a28 protein_coding protein_coding MGP_BALBcJ_T0051446.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26716798 26760029 - MGP_BALBcJ_P0051446 Ermp1 protein_coding protein_coding MGP_BALBcJ_T0051447.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26716802 26720621 - Ermp1 protein_coding processed_transcript MGP_BALBcJ_T0051448.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26718587 26759801 - MGP_BALBcJ_P0051448 Ermp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051449.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26720792 26757641 - MGP_BALBcJ_P0051449 Ermp1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051450.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26721007 26721610 - Ermp1 protein_coding retained_intron MGP_BALBcJ_T0051451.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26735546 26747330 - Ermp1 protein_coding processed_transcript MGP_BALBcJ_T0051452.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26736496 26760004 - Ermp1 protein_coding retained_intron MGP_BALBcJ_T0051453.1 MGP_BALBcJ_G0025001.1 mouse_genomes_project 19 26756323 26759992 - Ermp1 protein_coding retained_intron MGP_BALBcJ_T0007040.1 MGP_BALBcJ_G0005779.1 mouse_genomes_project 19 2863639 2869443 + Gm10814 lincRNA lincRNA MGP_BALBcJ_T0010298.1 MGP_BALBcJ_G0008423.1 mouse_genomes_project 19 41722646 41722707 + Mir5114 miRNA miRNA MGP_BALBcJ_T0013358.1 MGP_BALBcJ_G0011455.1 mouse_genomes_project 19 9406008 9406600 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0017676.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33892502 33984940 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017677.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33897862 33968930 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017678.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33897874 33904462 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017679.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33897879 33904442 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017680.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33921987 33937660 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017681.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33924124 33968724 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017682.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33937503 33968783 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0017683.1 MGP_BALBcJ_G0015326.1 mouse_genomes_project 19 33937672 33968779 - 1500017E21Rik processed_transcript processed_transcript MGP_BALBcJ_T0051438.1 MGP_BALBcJ_G0024999.1 mouse_genomes_project 19 26513473 26573421 + MGP_BALBcJ_P0051438 Pdcd1lg2 protein_coding protein_coding MGP_BALBcJ_T0051234.1 MGP_BALBcJ_G0024917.1 mouse_genomes_project 19 10531740 10532682 + MGP_BALBcJ_P0051234 Olfr1489 protein_coding protein_coding MGP_BALBcJ_T0051863.1 MGP_BALBcJ_G0025147.1 mouse_genomes_project 19 42199885 42282030 + MGP_BALBcJ_P0051863 Pax2 protein_coding protein_coding MGP_BALBcJ_T0051864.1 MGP_BALBcJ_G0025147.1 mouse_genomes_project 19 42201233 42282050 + MGP_BALBcJ_P0051864 Pax2 protein_coding protein_coding MGP_BALBcJ_T0051865.1 MGP_BALBcJ_G0025147.1 mouse_genomes_project 19 42203930 42262786 + MGP_BALBcJ_P0051865 Pax2 protein_coding protein_coding MGP_BALBcJ_T0050996.1 MGP_BALBcJ_G0024801.1 mouse_genomes_project 19 6831964 6834385 + MGP_BALBcJ_P0050996 Fth1 protein_coding protein_coding MGP_BALBcJ_T0051010.1 MGP_BALBcJ_G0024807.1 mouse_genomes_project 19 7052516 7057684 - MGP_BALBcJ_P0051010 Fen1 protein_coding protein_coding MGP_BALBcJ_T0051011.1 MGP_BALBcJ_G0024807.1 mouse_genomes_project 19 7052522 7057457 - MGP_BALBcJ_P0051011 Fen1 protein_coding protein_coding MGP_BALBcJ_T0051012.1 MGP_BALBcJ_G0024807.1 mouse_genomes_project 19 7052522 7057583 - MGP_BALBcJ_P0051012 Fen1 protein_coding protein_coding MGP_BALBcJ_T0051013.1 MGP_BALBcJ_G0024807.1 mouse_genomes_project 19 7052526 7057408 - MGP_BALBcJ_P0051013 Fen1 protein_coding protein_coding MGP_BALBcJ_T0050681.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198462 3204364 + MGP_BALBcJ_P0050681 Men1 protein_coding protein_coding MGP_BALBcJ_T0050682.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198462 3204375 + MGP_BALBcJ_P0050682 Men1 protein_coding protein_coding MGP_BALBcJ_T0050683.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198496 3204373 + MGP_BALBcJ_P0050683 Men1 protein_coding protein_coding MGP_BALBcJ_T0050684.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198522 3204373 + MGP_BALBcJ_P0050684 Men1 protein_coding protein_coding MGP_BALBcJ_T0050685.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198522 3204373 + MGP_BALBcJ_P0050685 Men1 protein_coding protein_coding MGP_BALBcJ_T0050686.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198529 3204375 + Men1 protein_coding retained_intron MGP_BALBcJ_T0050687.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198530 3204267 + MGP_BALBcJ_P0050687 Men1 protein_coding protein_coding MGP_BALBcJ_T0050688.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198547 3203947 + MGP_BALBcJ_P0050688 Men1 protein_coding protein_coding MGP_BALBcJ_T0050689.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198594 3204373 + MGP_BALBcJ_P0050689 Men1 protein_coding protein_coding MGP_BALBcJ_T0050690.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3198944 3203656 + MGP_BALBcJ_P0050690 Men1 protein_coding protein_coding MGP_BALBcJ_T0050691.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3200393 3201892 + MGP_BALBcJ_P0050691 Men1 protein_coding protein_coding MGP_BALBcJ_T0050692.1 MGP_BALBcJ_G0024725.1 mouse_genomes_project 19 3203330 3204296 + MGP_BALBcJ_P0050692 Men1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0010274.1 MGP_BALBcJ_G0008399.1 mouse_genomes_project 19 5797718 5797827 + Mir6992 miRNA miRNA MGP_BALBcJ_T0050586.1 MGP_BALBcJ_G0024699.1 mouse_genomes_project 19 2760717 2767968 - MGP_BALBcJ_P0050586 Cdc42ep2 protein_coding protein_coding MGP_BALBcJ_T0051243.1 MGP_BALBcJ_G0024926.1 mouse_genomes_project 19 10778581 10779529 - MGP_BALBcJ_P0051243 Olfr1501 protein_coding protein_coding MGP_BALBcJ_T0051031.1 MGP_BALBcJ_G0024812.1 mouse_genomes_project 19 7309358 7311420 - MGP_BALBcJ_P0051031 Lrrc10b protein_coding protein_coding MGP_BALBcJ_T0007043.1 MGP_BALBcJ_G0005782.1 mouse_genomes_project 19 7894941 7899207 - lincRNA lincRNA MGP_BALBcJ_T0050292.1 MGP_BALBcJ_G0024605.1 mouse_genomes_project 19 793369 797059 + Doc2g protein_coding retained_intron MGP_BALBcJ_T0050293.1 MGP_BALBcJ_G0024605.1 mouse_genomes_project 19 793373 795837 + Doc2g protein_coding retained_intron MGP_BALBcJ_T0050294.1 MGP_BALBcJ_G0024605.1 mouse_genomes_project 19 793384 797060 + MGP_BALBcJ_P0050294 Doc2g protein_coding protein_coding MGP_BALBcJ_T0050295.1 MGP_BALBcJ_G0024605.1 mouse_genomes_project 19 793748 796188 + Doc2g protein_coding retained_intron MGP_BALBcJ_T0051101.1 MGP_BALBcJ_G0024841.1 mouse_genomes_project 19 8103232 8120262 - MGP_BALBcJ_P0051101 Ms4a1 protein_coding protein_coding MGP_BALBcJ_T0051102.1 MGP_BALBcJ_G0024841.1 mouse_genomes_project 19 8104434 8108247 - Ms4a1 protein_coding retained_intron MGP_BALBcJ_T0051103.1 MGP_BALBcJ_G0024841.1 mouse_genomes_project 19 8105222 8112379 - MGP_BALBcJ_P0051103 Ms4a1 protein_coding unknown_likely_coding MGP_BALBcJ_T0051104.1 MGP_BALBcJ_G0024841.1 mouse_genomes_project 19 8107552 8120166 - Ms4a1 protein_coding retained_intron MGP_BALBcJ_T0051244.1 MGP_BALBcJ_G0024927.1 mouse_genomes_project 19 10807123 10807855 + MGP_BALBcJ_P0051244 protein_coding protein_coding MGP_BALBcJ_T0051528.1 MGP_BALBcJ_G0025029.1 mouse_genomes_project 19 31485692 31500167 - MGP_BALBcJ_P0051528 Acta2 protein_coding protein_coding MGP_BALBcJ_T0051009.1 MGP_BALBcJ_G0024806.1 mouse_genomes_project 19 7036276 7050257 + MGP_BALBcJ_P0051009 Fads1 protein_coding protein_coding MGP_BALBcJ_T0050826.1 MGP_BALBcJ_G0024755.1 mouse_genomes_project 19 4154814 4157634 + MGP_BALBcJ_P0050826 Rcor2 protein_coding protein_coding MGP_BALBcJ_T0050827.1 MGP_BALBcJ_G0024755.1 mouse_genomes_project 19 4156451 4162721 + MGP_BALBcJ_P0050827 Rcor2 protein_coding protein_coding MGP_BALBcJ_T0050828.1 MGP_BALBcJ_G0024755.1 mouse_genomes_project 19 4158441 4159259 + Rcor2 protein_coding retained_intron MGP_BALBcJ_T0100905.1 MGP_BALBcJ_G0038941.1 mouse_genomes_project 19 17028562 17028694 - Gm22684 snoRNA snoRNA MGP_BALBcJ_T0050541.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2498526 2522429 - MGP_BALBcJ_P0050541 Pcnx3 protein_coding protein_coding MGP_BALBcJ_T0050542.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2498529 2507891 - Pcnx3 protein_coding retained_intron MGP_BALBcJ_T0050543.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2498531 2521670 - MGP_BALBcJ_P0050543 Pcnx3 protein_coding protein_coding MGP_BALBcJ_T0050544.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2499127 2500090 - Pcnx3 protein_coding retained_intron MGP_BALBcJ_T0050545.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2499307 2500874 - MGP_BALBcJ_P0050545 Pcnx3 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050546.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2499882 2500418 - Pcnx3 protein_coding retained_intron MGP_BALBcJ_T0050547.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2507235 2518400 - MGP_BALBcJ_P0050547 Pcnx3 protein_coding protein_coding MGP_BALBcJ_T0050548.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2508866 2513306 - MGP_BALBcJ_P0050548 Pcnx3 protein_coding protein_coding MGP_BALBcJ_T0050549.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2512711 2517075 - MGP_BALBcJ_P0050549 Pcnx3 protein_coding protein_coding MGP_BALBcJ_T0050550.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2513131 2517605 - MGP_BALBcJ_P0050550 Pcnx3 protein_coding protein_coding MGP_BALBcJ_T0050551.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2513662 2515265 - Pcnx3 protein_coding retained_intron MGP_BALBcJ_T0050552.1 MGP_BALBcJ_G0024687.1 mouse_genomes_project 19 2517472 2522216 - Pcnx3 protein_coding retained_intron MGP_BALBcJ_T0051923.1 MGP_BALBcJ_G0025167.1 mouse_genomes_project 19 43468549 43471245 + MGP_BALBcJ_P0051923 Hps6 protein_coding protein_coding MGP_BALBcJ_T0050464.1 MGP_BALBcJ_G0024657.1 mouse_genomes_project 19 1909134 1913827 + MGP_BALBcJ_P0050464 Yif1a protein_coding protein_coding MGP_BALBcJ_T0003843.1 MGP_BALBcJ_G0003443.1 mouse_genomes_project 19 9541817 9557343 - Gm15962 antisense antisense MGP_BALBcJ_T0003844.1 MGP_BALBcJ_G0003443.1 mouse_genomes_project 19 9551921 9557387 - Gm15962 antisense antisense MGP_BALBcJ_T0001013.1 MGP_BALBcJ_G0000941.1 mouse_genomes_project 19 34737652 34739400 - TEC TEC MGP_BALBcJ_T0052091.1 MGP_BALBcJ_G0025223.1 mouse_genomes_project 19 51548263 51638263 + MGP_BALBcJ_P0052091 Shoc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0013351.1 MGP_BALBcJ_G0011448.1 mouse_genomes_project 19 4580811 4581927 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0050415.1 MGP_BALBcJ_G0024637.1 mouse_genomes_project 19 1551995 1624887 - MGP_BALBcJ_P0050415 Gm21992 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050423.1 MGP_BALBcJ_G0024637.1 mouse_genomes_project 19 1597599 1624783 - MGP_BALBcJ_P0050423 Gm21992 protein_coding protein_coding MGP_BALBcJ_T0050424.1 MGP_BALBcJ_G0024637.1 mouse_genomes_project 19 1597600 1624487 - MGP_BALBcJ_P0050424 Gm21992 protein_coding protein_coding MGP_BALBcJ_T0050425.1 MGP_BALBcJ_G0024637.1 mouse_genomes_project 19 1599816 1624783 - MGP_BALBcJ_P0050425 Gm21992 protein_coding protein_coding MGP_BALBcJ_T0050427.1 MGP_BALBcJ_G0024637.1 mouse_genomes_project 19 1603610 1624878 - Gm21992 protein_coding retained_intron MGP_BALBcJ_T0051429.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26450457 26464096 - MGP_BALBcJ_P0051429 Plgrkt protein_coding protein_coding MGP_BALBcJ_T0051430.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26452257 26453726 - Plgrkt protein_coding retained_intron MGP_BALBcJ_T0051431.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26452894 26463643 - MGP_BALBcJ_P0051431 Plgrkt protein_coding protein_coding MGP_BALBcJ_T0051432.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26452988 26464060 - MGP_BALBcJ_P0051432 Plgrkt protein_coding protein_coding MGP_BALBcJ_T0051433.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26460366 26469546 - MGP_BALBcJ_P0051433 Plgrkt protein_coding protein_coding MGP_BALBcJ_T0051434.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26463089 26466135 - Plgrkt protein_coding processed_transcript MGP_BALBcJ_T0051435.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26464324 26466698 - Plgrkt protein_coding processed_transcript MGP_BALBcJ_T0051436.1 MGP_BALBcJ_G0024997.1 mouse_genomes_project 19 26466310 26469628 - Plgrkt protein_coding processed_transcript MGP_BALBcJ_T0100901.1 MGP_BALBcJ_G0038937.1 mouse_genomes_project 19 8485144 8485194 - Gm24599 snoRNA snoRNA MGP_BALBcJ_T0051302.1 MGP_BALBcJ_G0024952.1 mouse_genomes_project 19 18251194 18261224 + MGP_BALBcJ_P0051302 Zfand5 protein_coding protein_coding MGP_BALBcJ_T0051303.1 MGP_BALBcJ_G0024952.1 mouse_genomes_project 19 18251603 18259341 + MGP_BALBcJ_P0051303 Zfand5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051304.1 MGP_BALBcJ_G0024952.1 mouse_genomes_project 19 18252162 18255951 + MGP_BALBcJ_P0051304 Zfand5 protein_coding protein_coding MGP_BALBcJ_T0051305.1 MGP_BALBcJ_G0024952.1 mouse_genomes_project 19 18254891 18259572 + Zfand5 protein_coding retained_intron MGP_BALBcJ_T0051306.1 MGP_BALBcJ_G0024952.1 mouse_genomes_project 19 18254951 18259879 + Zfand5 protein_coding retained_intron MGP_BALBcJ_T0051170.1 MGP_BALBcJ_G0024868.1 mouse_genomes_project 19 8948378 8949426 - MGP_BALBcJ_P0051170 Olfr1424 protein_coding protein_coding MGP_BALBcJ_T0051423.1 MGP_BALBcJ_G0024993.1 mouse_genomes_project 19 26200904 26243369 + MGP_BALBcJ_P0051423 Rcl1 protein_coding protein_coding MGP_BALBcJ_T0051922.1 MGP_BALBcJ_G0025166.1 mouse_genomes_project 19 43282216 43463422 - MGP_BALBcJ_P0051922 9130011E15Rik protein_coding protein_coding MGP_BALBcJ_T0050792.1 MGP_BALBcJ_G0024738.1 mouse_genomes_project 19 3796271 3804999 - MGP_BALBcJ_P0050792 Kcnk4 protein_coding protein_coding MGP_BALBcJ_T0099647.1 MGP_BALBcJ_G0037683.1 mouse_genomes_project 19 39355629 39355728 + Gm23113 snRNA snRNA MGP_BALBcJ_T0007047.1 MGP_BALBcJ_G0005786.1 mouse_genomes_project 19 12935989 12964739 + C130060C02Rik lincRNA lincRNA MGP_BALBcJ_T0051264.1 MGP_BALBcJ_G0024937.1 mouse_genomes_project 19 13840343 13841858 - MGP_BALBcJ_P0051264 Foxb2 protein_coding protein_coding MGP_BALBcJ_T0050568.1 MGP_BALBcJ_G0024695.1 mouse_genomes_project 19 2685070 2710807 - MGP_BALBcJ_P0050568 Frmd8 protein_coding protein_coding MGP_BALBcJ_T0050569.1 MGP_BALBcJ_G0024695.1 mouse_genomes_project 19 2697790 2699217 - Frmd8 protein_coding retained_intron MGP_BALBcJ_T0050570.1 MGP_BALBcJ_G0024695.1 mouse_genomes_project 19 2700718 2708961 - Frmd8 protein_coding retained_intron MGP_BALBcJ_T0050571.1 MGP_BALBcJ_G0024695.1 mouse_genomes_project 19 2700804 2710772 - MGP_BALBcJ_P0050571 Frmd8 protein_coding protein_coding MGP_BALBcJ_T0100902.1 MGP_BALBcJ_G0038938.1 mouse_genomes_project 19 8820241 8820375 - Gm22272 snoRNA snoRNA MGP_BALBcJ_T0051965.1 MGP_BALBcJ_G0025174.1 mouse_genomes_project 19 43780475 43787738 + MGP_BALBcJ_P0051965 Nfkb2 protein_coding protein_coding MGP_BALBcJ_T0051966.1 MGP_BALBcJ_G0025174.1 mouse_genomes_project 19 43781433 43787738 + MGP_BALBcJ_P0051966 Nfkb2 protein_coding protein_coding MGP_BALBcJ_T0051715.1 MGP_BALBcJ_G0025098.1 mouse_genomes_project 19 39141123 39176559 - MGP_BALBcJ_P0051715 Arhgap19 protein_coding protein_coding MGP_BALBcJ_T0051716.1 MGP_BALBcJ_G0025098.1 mouse_genomes_project 19 39141126 39176596 - MGP_BALBcJ_P0051716 Arhgap19 protein_coding protein_coding MGP_BALBcJ_T0051717.1 MGP_BALBcJ_G0025098.1 mouse_genomes_project 19 39144219 39155811 - MGP_BALBcJ_P0051717 Arhgap19 protein_coding protein_coding MGP_BALBcJ_T0051718.1 MGP_BALBcJ_G0025098.1 mouse_genomes_project 19 39144414 39176559 - MGP_BALBcJ_P0051718 Arhgap19 protein_coding protein_coding MGP_BALBcJ_T0007030.1 MGP_BALBcJ_G0005775.1 mouse_genomes_project 19 960768 965487 + Gm17552 lincRNA lincRNA MGP_BALBcJ_T0050995.1 MGP_BALBcJ_G0024800.1 mouse_genomes_project 19 6718787 6745943 - MGP_BALBcJ_P0050995 Incenp protein_coding protein_coding MGP_BALBcJ_T0050994.1 MGP_BALBcJ_G0024799.1 mouse_genomes_project 19 6690012 6695253 + MGP_BALBcJ_P0050994 Scgb2a2 protein_coding protein_coding MGP_BALBcJ_T0052233.1 MGP_BALBcJ_G0025266.1 mouse_genomes_project 19 58446762 58476174 - MGP_BALBcJ_P0052233 Eif3a protein_coding protein_coding MGP_BALBcJ_T0010309.1 MGP_BALBcJ_G0008434.1 mouse_genomes_project 19 56570513 56570600 - Mir3086 miRNA miRNA MGP_BALBcJ_T0017672.1 MGP_BALBcJ_G0015323.1 mouse_genomes_project 19 23694131 23696729 - Gm20616 processed_transcript processed_transcript MGP_BALBcJ_T0017673.1 MGP_BALBcJ_G0015323.1 mouse_genomes_project 19 23694342 23696720 - Gm20616 processed_transcript processed_transcript MGP_BALBcJ_T0051488.1 MGP_BALBcJ_G0025014.1 mouse_genomes_project 19 29119667 29198221 - MGP_BALBcJ_P0051488 Asah2 protein_coding protein_coding MGP_BALBcJ_T0050807.1 MGP_BALBcJ_G0024744.1 mouse_genomes_project 19 3855113 3860304 - MGP_BALBcJ_P0050807 Vegfb protein_coding protein_coding MGP_BALBcJ_T0050808.1 MGP_BALBcJ_G0024744.1 mouse_genomes_project 19 3855113 3860282 - MGP_BALBcJ_P0050808 Vegfb protein_coding protein_coding MGP_BALBcJ_T0050809.1 MGP_BALBcJ_G0024744.1 mouse_genomes_project 19 3859046 3859793 - Vegfb protein_coding retained_intron MGP_BALBcJ_T0050758.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3282681 3399343 + MGP_BALBcJ_P0050758 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050759.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3282688 3330577 + Nrxn2 protein_coding retained_intron MGP_BALBcJ_T0050760.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3282688 3399342 + MGP_BALBcJ_P0050760 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050761.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3282715 3398511 + MGP_BALBcJ_P0050761 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050762.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3291685 3399343 + MGP_BALBcJ_P0050762 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050763.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3292394 3336207 + MGP_BALBcJ_P0050763 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050764.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3292515 3337166 + MGP_BALBcJ_P0050764 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050765.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3309297 3337180 + Nrxn2 protein_coding processed_transcript MGP_BALBcJ_T0050766.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3310135 3337278 + Nrxn2 protein_coding processed_transcript MGP_BALBcJ_T0050767.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3318408 3347573 + Nrxn2 protein_coding retained_intron MGP_BALBcJ_T0050768.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3336935 3347572 + Nrxn2 protein_coding retained_intron MGP_BALBcJ_T0050769.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3363346 3375192 + Nrxn2 protein_coding processed_transcript MGP_BALBcJ_T0050770.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3363503 3399343 + MGP_BALBcJ_P0050770 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050771.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3363510 3410289 + MGP_BALBcJ_P0050771 Nrxn2 protein_coding protein_coding MGP_BALBcJ_T0050772.1 MGP_BALBcJ_G0024730.1 mouse_genomes_project 19 3382531 3398529 + Nrxn2 protein_coding processed_transcript MGP_BALBcJ_T0050992.1 MGP_BALBcJ_G0024798.1 mouse_genomes_project 19 6173826 6200763 - MGP_BALBcJ_P0050992 Asrgl1 protein_coding protein_coding MGP_BALBcJ_T0050993.1 MGP_BALBcJ_G0024798.1 mouse_genomes_project 19 6196655 6200658 - Asrgl1 protein_coding processed_transcript MGP_BALBcJ_T0100920.1 MGP_BALBcJ_G0038956.1 mouse_genomes_project 19 58461004 58461123 - Gm26158 snoRNA snoRNA MGP_BALBcJ_T0003845.1 MGP_BALBcJ_G0003444.1 mouse_genomes_project 19 19443227 19450368 - Gm27151 antisense antisense MGP_BALBcJ_T0003846.1 MGP_BALBcJ_G0003444.1 mouse_genomes_project 19 19443257 19451091 - Gm27151 antisense antisense MGP_BALBcJ_T0007048.1 MGP_BALBcJ_G0005787.1 mouse_genomes_project 19 17400032 17417552 + 1500015L24Rik lincRNA lincRNA MGP_BALBcJ_T0007049.1 MGP_BALBcJ_G0005787.1 mouse_genomes_project 19 17417130 17417544 + 1500015L24Rik lincRNA lincRNA MGP_BALBcJ_T0050816.1 MGP_BALBcJ_G0024749.1 mouse_genomes_project 19 3896211 3918357 - MGP_BALBcJ_P0050816 Stip1 protein_coding protein_coding MGP_BALBcJ_T0003847.1 MGP_BALBcJ_G0003445.1 mouse_genomes_project 19 21449356 21463654 + Pip5k1bos antisense antisense MGP_BALBcJ_T0051167.1 MGP_BALBcJ_G0024865.1 mouse_genomes_project 19 8798814 8831384 + MGP_BALBcJ_P0051167 Patl1 protein_coding protein_coding MGP_BALBcJ_T0051089.1 MGP_BALBcJ_G0024835.1 mouse_genomes_project 19 7857424 7879536 - MGP_BALBcJ_P0051089 Ms4a18 protein_coding protein_coding MGP_BALBcJ_T0051753.1 MGP_BALBcJ_G0025111.1 mouse_genomes_project 19 39516762 39522549 - MGP_BALBcJ_P0051753 Avpi1 protein_coding protein_coding MGP_BALBcJ_T0051754.1 MGP_BALBcJ_G0025111.1 mouse_genomes_project 19 39518268 39522479 - MGP_BALBcJ_P0051754 Avpi1 protein_coding protein_coding MGP_BALBcJ_T0051654.1 MGP_BALBcJ_G0025079.1 mouse_genomes_project 19 37444616 37468263 + MGP_BALBcJ_P0051654 Cyp2c50 protein_coding protein_coding MGP_BALBcJ_T0052143.1 MGP_BALBcJ_G0025236.1 mouse_genomes_project 19 54154690 54173662 - MGP_BALBcJ_P0052143 Dclre1a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052144.1 MGP_BALBcJ_G0025236.1 mouse_genomes_project 19 54154692 54172678 - Dclre1a protein_coding retained_intron MGP_BALBcJ_T0052145.1 MGP_BALBcJ_G0025236.1 mouse_genomes_project 19 54154692 54173740 - MGP_BALBcJ_P0052145 Dclre1a protein_coding protein_coding MGP_BALBcJ_T0052146.1 MGP_BALBcJ_G0025236.1 mouse_genomes_project 19 54155105 54162905 - Dclre1a protein_coding retained_intron MGP_BALBcJ_T0052147.1 MGP_BALBcJ_G0025236.1 mouse_genomes_project 19 54165533 54167068 - Dclre1a protein_coding processed_transcript MGP_BALBcJ_T0052148.1 MGP_BALBcJ_G0025236.1 mouse_genomes_project 19 54172380 54173549 - MGP_BALBcJ_P0052148 Dclre1a protein_coding protein_coding MGP_BALBcJ_T0050280.1 MGP_BALBcJ_G0024599.1 mouse_genomes_project 19 721405 735670 + MGP_BALBcJ_P0050280 Unc93b1 protein_coding protein_coding MGP_BALBcJ_T0050281.1 MGP_BALBcJ_G0024599.1 mouse_genomes_project 19 721445 722962 + Unc93b1 protein_coding retained_intron MGP_BALBcJ_T0050282.1 MGP_BALBcJ_G0024599.1 mouse_genomes_project 19 721476 735673 + MGP_BALBcJ_P0050282 Unc93b1 protein_coding protein_coding MGP_BALBcJ_T0050283.1 MGP_BALBcJ_G0024599.1 mouse_genomes_project 19 728772 735670 + Unc93b1 protein_coding retained_intron MGP_BALBcJ_T0098354.1 MGP_BALBcJ_G0036408.1 mouse_genomes_project 19 39206866 39207508 + pseudogene pseudogene MGP_BALBcJ_T0050865.1 MGP_BALBcJ_G0024762.1 mouse_genomes_project 19 4492301 4502833 - MGP_BALBcJ_P0050865 Lgals12 protein_coding protein_coding MGP_BALBcJ_T0050866.1 MGP_BALBcJ_G0024762.1 mouse_genomes_project 19 4492302 4502818 - MGP_BALBcJ_P0050866 Lgals12 protein_coding protein_coding MGP_BALBcJ_T0050867.1 MGP_BALBcJ_G0024762.1 mouse_genomes_project 19 4492355 4502743 - MGP_BALBcJ_P0050867 Lgals12 protein_coding protein_coding MGP_BALBcJ_T0052072.1 MGP_BALBcJ_G0025214.1 mouse_genomes_project 19 50713635 50822564 + MGP_BALBcJ_P0052072 Add3 protein_coding protein_coding MGP_BALBcJ_T0052073.1 MGP_BALBcJ_G0025214.1 mouse_genomes_project 19 50715946 50822564 + MGP_BALBcJ_P0052073 Add3 protein_coding protein_coding MGP_BALBcJ_T0052074.1 MGP_BALBcJ_G0025214.1 mouse_genomes_project 19 50717179 50822564 + MGP_BALBcJ_P0052074 Add3 protein_coding protein_coding MGP_BALBcJ_T0052077.1 MGP_BALBcJ_G0025216.1 mouse_genomes_project 19 50954624 50954825 - MGP_BALBcJ_P0052077 Gm10197 protein_coding protein_coding MGP_BALBcJ_T0051798.1 MGP_BALBcJ_G0025126.1 mouse_genomes_project 19 41094169 41141334 + MGP_BALBcJ_P0051798 Entpd7 protein_coding protein_coding MGP_BALBcJ_T0051799.1 MGP_BALBcJ_G0025126.1 mouse_genomes_project 19 41094306 41097611 + Entpd7 protein_coding retained_intron MGP_BALBcJ_T0051800.1 MGP_BALBcJ_G0025126.1 mouse_genomes_project 19 41094337 41130298 + Entpd7 protein_coding retained_intron MGP_BALBcJ_T0051801.1 MGP_BALBcJ_G0025126.1 mouse_genomes_project 19 41118226 41123109 + Entpd7 protein_coding retained_intron MGP_BALBcJ_T0051802.1 MGP_BALBcJ_G0025126.1 mouse_genomes_project 19 41134044 41135813 + Entpd7 protein_coding retained_intron MGP_BALBcJ_T0051174.1 MGP_BALBcJ_G0024872.1 mouse_genomes_project 19 9078628 9079567 - MGP_BALBcJ_P0051174 Olfr262 protein_coding protein_coding MGP_BALBcJ_T0099642.1 MGP_BALBcJ_G0037678.1 mouse_genomes_project 19 27093731 27093897 + Gm26046 snRNA snRNA MGP_BALBcJ_T0051437.1 MGP_BALBcJ_G0024998.1 mouse_genomes_project 19 26469692 26490495 + MGP_BALBcJ_P0051437 Cd274 protein_coding protein_coding MGP_BALBcJ_T0003831.1 MGP_BALBcJ_G0003435.1 mouse_genomes_project 19 2680971 2686757 + Frmd8os antisense antisense MGP_BALBcJ_T0003832.1 MGP_BALBcJ_G0003435.1 mouse_genomes_project 19 2683876 2686741 + Frmd8os antisense antisense MGP_BALBcJ_T0050956.1 MGP_BALBcJ_G0024784.1 mouse_genomes_project 19 5930291 5934598 + MGP_BALBcJ_P0050956 Ubxn1 protein_coding protein_coding MGP_BALBcJ_T0050957.1 MGP_BALBcJ_G0024784.1 mouse_genomes_project 19 5930375 5934606 + MGP_BALBcJ_P0050957 Ubxn1 protein_coding protein_coding MGP_BALBcJ_T0098858.1 MGP_BALBcJ_G0036906.1 mouse_genomes_project 19 53468703 53473230 + Ppnr sense_intronic sense_intronic MGP_BALBcJ_T0050989.1 MGP_BALBcJ_G0024796.1 mouse_genomes_project 19 6052249 6140413 + MGP_BALBcJ_P0050989 Ahnak protein_coding protein_coding MGP_BALBcJ_T0050990.1 MGP_BALBcJ_G0024796.1 mouse_genomes_project 19 6065755 6082385 + MGP_BALBcJ_P0050990 Ahnak protein_coding protein_coding MGP_BALBcJ_T0051299.1 MGP_BALBcJ_G0024949.1 mouse_genomes_project 19 17594172 17638319 + MGP_BALBcJ_P0051299 Aldh1a1 protein_coding protein_coding MGP_BALBcJ_T0051659.1 MGP_BALBcJ_G0025081.1 mouse_genomes_project 19 37583982 37635216 - MGP_BALBcJ_P0051659 Pdlim1 protein_coding protein_coding MGP_BALBcJ_T0051660.1 MGP_BALBcJ_G0025081.1 mouse_genomes_project 19 37585172 37586166 - Pdlim1 protein_coding retained_intron MGP_BALBcJ_T0051661.1 MGP_BALBcJ_G0025081.1 mouse_genomes_project 19 37585332 37593566 - Pdlim1 protein_coding retained_intron MGP_BALBcJ_T0051662.1 MGP_BALBcJ_G0025081.1 mouse_genomes_project 19 37593352 37635442 - MGP_BALBcJ_P0051662 Pdlim1 protein_coding protein_coding MGP_BALBcJ_T0051663.1 MGP_BALBcJ_G0025081.1 mouse_genomes_project 19 37610038 37635216 - Pdlim1 protein_coding retained_intron MGP_BALBcJ_T0099640.1 MGP_BALBcJ_G0037676.1 mouse_genomes_project 19 22504469 22504573 - Gm26207 snRNA snRNA MGP_BALBcJ_T0099639.1 MGP_BALBcJ_G0037675.1 mouse_genomes_project 19 20309419 20309526 + Gm24263 snRNA snRNA MGP_BALBcJ_T0050975.1 MGP_BALBcJ_G0024792.1 mouse_genomes_project 19 5991763 6004224 + MGP_BALBcJ_P0050975 Eml3 protein_coding protein_coding MGP_BALBcJ_T0050590.1 MGP_BALBcJ_G0024702.1 mouse_genomes_project 19 2839090 2866846 - MGP_BALBcJ_P0050590 Capn1 protein_coding protein_coding MGP_BALBcJ_T0050591.1 MGP_BALBcJ_G0024702.1 mouse_genomes_project 19 2839090 2866268 - MGP_BALBcJ_P0050591 Capn1 protein_coding protein_coding MGP_BALBcJ_T0051706.1 MGP_BALBcJ_G0025094.1 mouse_genomes_project 19 38849866 38934799 + MGP_BALBcJ_P0051706 Lcor protein_coding protein_coding MGP_BALBcJ_T0051707.1 MGP_BALBcJ_G0025094.1 mouse_genomes_project 19 38922195 38932334 + MGP_BALBcJ_P0051707 Lcor protein_coding protein_coding MGP_BALBcJ_T0050414.1 MGP_BALBcJ_G0024636.1 mouse_genomes_project 19 1518217 1561436 + MGP_BALBcJ_P0050414 Sptbn2 protein_coding protein_coding MGP_BALBcJ_T0052061.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50517192 50605214 - MGP_BALBcJ_P0052061 Xpnpep1 protein_coding protein_coding MGP_BALBcJ_T0052062.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50520135 50605302 - MGP_BALBcJ_P0052062 Xpnpep1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0052063.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50557720 50586945 - Xpnpep1 protein_coding processed_transcript MGP_BALBcJ_T0052064.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50557721 50606828 - MGP_BALBcJ_P0052064 Xpnpep1 protein_coding protein_coding MGP_BALBcJ_T0052065.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50561942 50563212 - Xpnpep1 protein_coding retained_intron MGP_BALBcJ_T0052066.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50574506 50581944 - Xpnpep1 protein_coding processed_transcript MGP_BALBcJ_T0052067.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50576670 50586780 - Xpnpep1 protein_coding processed_transcript MGP_BALBcJ_T0052068.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50578785 50580208 - Xpnpep1 protein_coding retained_intron MGP_BALBcJ_T0052069.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50578814 50605221 - MGP_BALBcJ_P0052069 Xpnpep1 protein_coding protein_coding MGP_BALBcJ_T0052070.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50584074 50598797 - Xpnpep1 protein_coding processed_transcript MGP_BALBcJ_T0052071.1 MGP_BALBcJ_G0025213.1 mouse_genomes_project 19 50599157 50605225 - Xpnpep1 protein_coding processed_transcript MGP_BALBcJ_T0099653.1 MGP_BALBcJ_G0037689.1 mouse_genomes_project 19 50733126 50733233 - Gm24724 snRNA snRNA MGP_BALBcJ_T0100908.1 MGP_BALBcJ_G0038944.1 mouse_genomes_project 19 21976064 21976196 - Gm23658 snoRNA snoRNA MGP_BALBcJ_T0013359.1 MGP_BALBcJ_G0011456.1 mouse_genomes_project 19 10969877 10970666 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0010267.1 MGP_BALBcJ_G0008392.1 mouse_genomes_project 19 3125508 3125597 + Mir192 miRNA miRNA MGP_BALBcJ_T0051536.1 MGP_BALBcJ_G0025034.1 mouse_genomes_project 19 31837060 31864189 - MGP_BALBcJ_P0051536 Ifit1bl1 protein_coding protein_coding MGP_BALBcJ_T0051537.1 MGP_BALBcJ_G0025034.1 mouse_genomes_project 19 31837063 31864170 - MGP_BALBcJ_P0051537 Ifit1bl1 protein_coding protein_coding MGP_BALBcJ_T0051110.1 MGP_BALBcJ_G0024843.1 mouse_genomes_project 19 8156297 8169414 - MGP_BALBcJ_P0051110 Ms4a14 protein_coding protein_coding MGP_BALBcJ_T0098715.1 MGP_BALBcJ_G0036769.1 mouse_genomes_project 19 34435776 34435854 - Gm22714 ribozyme ribozyme MGP_BALBcJ_T0050442.1 MGP_BALBcJ_G0024646.1 mouse_genomes_project 19 1699353 1719179 - MGP_BALBcJ_P0050442 Bbs1 protein_coding protein_coding MGP_BALBcJ_T0007050.1 MGP_BALBcJ_G0005788.1 mouse_genomes_project 19 20037923 20081886 - C330002G04Rik lincRNA lincRNA MGP_BALBcJ_T0051746.1 MGP_BALBcJ_G0025107.1 mouse_genomes_project 19 39431195 39437875 + Hoga1 protein_coding processed_transcript MGP_BALBcJ_T0051747.1 MGP_BALBcJ_G0025107.1 mouse_genomes_project 19 39431377 39459792 + MGP_BALBcJ_P0051747 Hoga1 protein_coding protein_coding MGP_BALBcJ_T0051748.1 MGP_BALBcJ_G0025107.1 mouse_genomes_project 19 39431417 39460379 + MGP_BALBcJ_P0051748 Hoga1 protein_coding protein_coding MGP_BALBcJ_T0051749.1 MGP_BALBcJ_G0025107.1 mouse_genomes_project 19 39431436 39445755 + Hoga1 protein_coding retained_intron MGP_BALBcJ_T0003840.1 MGP_BALBcJ_G0003440.1 mouse_genomes_project 19 4272483 4274243 + 1700105P06Rik antisense antisense MGP_BALBcJ_T0017671.1 MGP_BALBcJ_G0015322.1 mouse_genomes_project 19 9420264 9429143 - A330040F15Rik processed_transcript processed_transcript MGP_BALBcJ_T0007094.1 MGP_BALBcJ_G0005819.1 mouse_genomes_project 19 57156164 57224869 + 2700089I24Rik lincRNA lincRNA MGP_BALBcJ_T0051212.1 MGP_BALBcJ_G0024895.1 mouse_genomes_project 19 9765977 9766922 - MGP_BALBcJ_P0051212 Olfr1448 protein_coding protein_coding MGP_BALBcJ_T0051817.1 MGP_BALBcJ_G0025131.1 mouse_genomes_project 19 41374652 41406120 - MGP_BALBcJ_P0051817 Cpn1 protein_coding protein_coding MGP_BALBcJ_T0051818.1 MGP_BALBcJ_G0025131.1 mouse_genomes_project 19 41380619 41387223 - Cpn1 protein_coding retained_intron MGP_BALBcJ_T0007041.1 MGP_BALBcJ_G0005780.1 mouse_genomes_project 19 3515671 3517157 + Gm14968 lincRNA lincRNA MGP_BALBcJ_T0051646.1 MGP_BALBcJ_G0025074.1 mouse_genomes_project 19 36610620 36675667 + MGP_BALBcJ_P0051646 Cyp2c29 protein_coding protein_coding MGP_BALBcJ_T0051647.1 MGP_BALBcJ_G0025074.1 mouse_genomes_project 19 36623687 36675718 + MGP_BALBcJ_P0051647 Cyp2c29 protein_coding protein_coding MGP_BALBcJ_T0051648.1 MGP_BALBcJ_G0025074.1 mouse_genomes_project 19 36623687 36675732 + MGP_BALBcJ_P0051648 Cyp2c29 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051426.1 MGP_BALBcJ_G0024995.1 mouse_genomes_project 19 26421583 26425592 - MGP_BALBcJ_P0051426 Insl6 protein_coding protein_coding MGP_BALBcJ_T0013357.1 MGP_BALBcJ_G0011454.1 mouse_genomes_project 19 8582888 8583681 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051179.1 MGP_BALBcJ_G0024877.1 mouse_genomes_project 19 9232778 9233726 + MGP_BALBcJ_P0051179 Olfr1440 protein_coding protein_coding MGP_BALBcJ_T0051544.1 MGP_BALBcJ_G0025040.1 mouse_genomes_project 19 32074756 32144012 - MGP_BALBcJ_P0051544 Pank1 protein_coding protein_coding MGP_BALBcJ_T0051545.1 MGP_BALBcJ_G0025040.1 mouse_genomes_project 19 32074757 32142474 - MGP_BALBcJ_P0051545 Pank1 protein_coding protein_coding MGP_BALBcJ_T0100899.1 MGP_BALBcJ_G0038935.1 mouse_genomes_project 19 5780340 5780466 + Snord22 snoRNA snoRNA MGP_BALBcJ_T0050631.1 MGP_BALBcJ_G0024711.1 mouse_genomes_project 19 2933263 2934016 + MGP_BALBcJ_P0050631 Tmem262 protein_coding protein_coding MGP_BALBcJ_T0050632.1 MGP_BALBcJ_G0024711.1 mouse_genomes_project 19 2933263 2934019 + MGP_BALBcJ_P0050632 Tmem262 protein_coding protein_coding MGP_BALBcJ_T0003852.1 MGP_BALBcJ_G0003449.1 mouse_genomes_project 19 39926390 39948951 - Gm16541 antisense antisense MGP_BALBcJ_T0003853.1 MGP_BALBcJ_G0003449.1 mouse_genomes_project 19 39926396 39948938 - Gm16541 antisense antisense MGP_BALBcJ_T0003854.1 MGP_BALBcJ_G0003449.1 mouse_genomes_project 19 39948349 39948951 - Gm16541 antisense antisense MGP_BALBcJ_T0051478.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 27697575 28897781 - MGP_BALBcJ_P0051478 Prkg1 protein_coding protein_coding MGP_BALBcJ_T0051479.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 27698571 28805544 - MGP_BALBcJ_P0051479 Prkg1 protein_coding protein_coding MGP_BALBcJ_T0051480.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 27698985 27704172 - Prkg1 protein_coding processed_transcript MGP_BALBcJ_T0051481.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 27698987 27704172 - Prkg1 protein_coding processed_transcript MGP_BALBcJ_T0051482.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 27753387 27759508 - Prkg1 protein_coding processed_transcript MGP_BALBcJ_T0051483.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 27838732 27906971 - Prkg1 protein_coding retained_intron MGP_BALBcJ_T0051485.1 MGP_BALBcJ_G0025011.1 mouse_genomes_project 19 28875029 28897721 - MGP_BALBcJ_P0051485 Prkg1 protein_coding protein_coding MGP_BALBcJ_T0100895.1 MGP_BALBcJ_G0038931.1 mouse_genomes_project 19 5779342 5779418 + Gm24453 snoRNA snoRNA MGP_BALBcJ_T0102017.1 MGP_BALBcJ_G0039851.1 mouse_genomes_project 19 43823981 43826088 - unitary_pseudogene processed_transcript MGP_BALBcJ_T0102018.1 MGP_BALBcJ_G0039851.1 mouse_genomes_project 19 43824679 43826088 - unitary_pseudogene unitary_pseudogene MGP_BALBcJ_T0052060.1 MGP_BALBcJ_G0025212.1 mouse_genomes_project 19 49822307 49823441 + MGP_BALBcJ_P0052060 Ins1 protein_coding protein_coding MGP_BALBcJ_T0050477.1 MGP_BALBcJ_G0024662.1 mouse_genomes_project 19 2102668 2126385 - MGP_BALBcJ_P0050477 Sf3b2 protein_coding protein_coding MGP_BALBcJ_T0017618.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915961 922316 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017619.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915986 921758 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017620.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915986 921758 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017621.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915986 921757 + Tmem134 processed_transcript retained_intron MGP_BALBcJ_T0017622.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915986 921758 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017623.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915986 921475 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017624.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915987 922316 + Tmem134 processed_transcript retained_intron MGP_BALBcJ_T0017625.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915987 922338 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017626.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 915987 922336 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017627.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 916002 921758 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017628.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 916006 921766 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017629.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 916014 921761 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017630.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 916016 917766 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017631.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 916016 921758 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017632.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 916056 921763 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0017633.1 MGP_BALBcJ_G0015312.1 mouse_genomes_project 19 917598 921288 + Tmem134 processed_transcript processed_transcript MGP_BALBcJ_T0051077.1 MGP_BALBcJ_G0024830.1 mouse_genomes_project 19 7776762 7778766 - MGP_BALBcJ_P0051077 Zp1 protein_coding protein_coding MGP_BALBcJ_T0051078.1 MGP_BALBcJ_G0024830.1 mouse_genomes_project 19 7776764 7783100 - MGP_BALBcJ_P0051078 Zp1 protein_coding protein_coding MGP_BALBcJ_T0051558.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832078 33899582 + MGP_BALBcJ_P0051558 Hectd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051559.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832107 33898692 + MGP_BALBcJ_P0051559 Hectd2 protein_coding protein_coding MGP_BALBcJ_T0051560.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832108 33869633 + Hectd2 protein_coding retained_intron MGP_BALBcJ_T0051561.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832108 33899585 + MGP_BALBcJ_P0051561 Hectd2 protein_coding protein_coding MGP_BALBcJ_T0051562.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832117 33875818 + Hectd2 protein_coding retained_intron MGP_BALBcJ_T0051563.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832268 33847348 + Hectd2 protein_coding retained_intron MGP_BALBcJ_T0051564.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33832299 33897281 + MGP_BALBcJ_P0051564 Hectd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051565.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33863969 33897281 + MGP_BALBcJ_P0051565 Hectd2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051566.1 MGP_BALBcJ_G0025046.1 mouse_genomes_project 19 33883609 33890848 + Hectd2 protein_coding retained_intron MGP_BALBcJ_T0051187.1 MGP_BALBcJ_G0024883.1 mouse_genomes_project 19 9432587 9460929 + MGP_BALBcJ_P0051187 Gm4952 protein_coding protein_coding MGP_BALBcJ_T0051188.1 MGP_BALBcJ_G0024883.1 mouse_genomes_project 19 9432629 9462307 + MGP_BALBcJ_P0051188 Gm4952 protein_coding protein_coding MGP_BALBcJ_T0050734.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263255 3279161 + MGP_BALBcJ_P0050734 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050735.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263371 3267549 + MGP_BALBcJ_P0050735 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050736.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263661 3267401 + MGP_BALBcJ_P0050736 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050737.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263779 3266490 + MGP_BALBcJ_P0050737 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050738.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263783 3267394 + MGP_BALBcJ_P0050738 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050739.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263789 3268253 + MGP_BALBcJ_P0050739 Rasgrp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050740.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3263832 3266362 + Rasgrp2 protein_coding processed_transcript MGP_BALBcJ_T0050741.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264028 3267554 + MGP_BALBcJ_P0050741 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050742.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264442 3266346 + Rasgrp2 protein_coding processed_transcript MGP_BALBcJ_T0050743.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264448 3279156 + MGP_BALBcJ_P0050743 Rasgrp2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050744.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264462 3268337 + MGP_BALBcJ_P0050744 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050745.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264477 3279167 + MGP_BALBcJ_P0050745 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050746.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264479 3268740 + MGP_BALBcJ_P0050746 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050747.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264498 3279166 + MGP_BALBcJ_P0050747 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050748.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3264538 3267528 + MGP_BALBcJ_P0050748 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050749.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3265610 3266362 + Rasgrp2 protein_coding processed_transcript MGP_BALBcJ_T0050750.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3265617 3267554 + MGP_BALBcJ_P0050750 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050751.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3265633 3267554 + MGP_BALBcJ_P0050751 Rasgrp2 protein_coding protein_coding MGP_BALBcJ_T0050752.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3265634 3267554 + Rasgrp2 protein_coding processed_transcript MGP_BALBcJ_T0050753.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3266833 3268887 + Rasgrp2 protein_coding retained_intron MGP_BALBcJ_T0050754.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3268497 3270977 + Rasgrp2 protein_coding retained_intron MGP_BALBcJ_T0050755.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3268656 3273584 + Rasgrp2 protein_coding retained_intron MGP_BALBcJ_T0050756.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3268742 3277957 + Rasgrp2 protein_coding retained_intron MGP_BALBcJ_T0050757.1 MGP_BALBcJ_G0024729.1 mouse_genomes_project 19 3272320 3279162 + Rasgrp2 protein_coding processed_transcript MGP_BALBcJ_T0050791.1 MGP_BALBcJ_G0024737.1 mouse_genomes_project 19 3792987 3795942 - MGP_BALBcJ_P0050791 Tex40 protein_coding protein_coding MGP_BALBcJ_T0051911.1 MGP_BALBcJ_G0025164.1 mouse_genomes_project 19 43213063 43246060 - MGP_BALBcJ_P0051911 Mgea5 protein_coding protein_coding MGP_BALBcJ_T0050619.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2921054 2933555 - MGP_BALBcJ_P0050619 Vps51 protein_coding protein_coding MGP_BALBcJ_T0050620.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2921202 2922532 - Vps51 protein_coding retained_intron MGP_BALBcJ_T0050621.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2921206 2930442 - MGP_BALBcJ_P0050621 Vps51 protein_coding protein_coding MGP_BALBcJ_T0050622.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2921263 2922363 - Vps51 protein_coding retained_intron MGP_BALBcJ_T0050623.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2921429 2922284 - MGP_BALBcJ_P0050623 Vps51 protein_coding protein_coding MGP_BALBcJ_T0050624.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2921961 2922826 - Vps51 protein_coding retained_intron MGP_BALBcJ_T0050625.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2922080 2922911 - Vps51 protein_coding retained_intron MGP_BALBcJ_T0050626.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2923293 2930448 - Vps51 protein_coding retained_intron MGP_BALBcJ_T0050627.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2924629 2930113 - Vps51 protein_coding retained_intron MGP_BALBcJ_T0050628.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2924694 2930443 - MGP_BALBcJ_P0050628 Vps51 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050629.1 MGP_BALBcJ_G0024709.1 mouse_genomes_project 19 2929147 2930445 - MGP_BALBcJ_P0050629 Vps51 protein_coding protein_coding MGP_BALBcJ_T0051555.1 MGP_BALBcJ_G0025045.1 mouse_genomes_project 19 33651359 33731144 + MGP_BALBcJ_P0051555 Pcgf5 protein_coding protein_coding MGP_BALBcJ_T0051556.1 MGP_BALBcJ_G0025045.1 mouse_genomes_project 19 33683938 33731144 + MGP_BALBcJ_P0051556 Pcgf5 protein_coding protein_coding MGP_BALBcJ_T0051557.1 MGP_BALBcJ_G0025045.1 mouse_genomes_project 19 33683977 33735927 + MGP_BALBcJ_P0051557 Pcgf5 protein_coding unknown_likely_coding MGP_BALBcJ_T0050894.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796160 5812278 + MGP_BALBcJ_P0050894 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050895.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796160 5811799 + MGP_BALBcJ_P0050895 Stx5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050896.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796217 5797418 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050897.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796226 5811336 + MGP_BALBcJ_P0050897 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050898.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796235 5811815 + MGP_BALBcJ_P0050898 Stx5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050899.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796236 5811855 + MGP_BALBcJ_P0050899 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050900.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796259 5799274 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050901.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796416 5797608 + MGP_BALBcJ_P0050901 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050902.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796550 5811855 + MGP_BALBcJ_P0050902 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050903.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796554 5805765 + MGP_BALBcJ_P0050903 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050904.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796635 5811855 + MGP_BALBcJ_P0050904 Stx5a protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050905.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5796891 5804881 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050906.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5797607 5805112 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050907.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5804396 5811281 + MGP_BALBcJ_P0050907 Stx5a protein_coding protein_coding MGP_BALBcJ_T0050908.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5804495 5811271 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050909.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5804510 5805706 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050910.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5804525 5811197 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050911.1 MGP_BALBcJ_G0024774.1 mouse_genomes_project 19 5804582 5805371 + Stx5a protein_coding retained_intron MGP_BALBcJ_T0050444.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1742977 1755149 - MGP_BALBcJ_P0050444 Peli3 protein_coding protein_coding MGP_BALBcJ_T0050445.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1744181 1755184 - MGP_BALBcJ_P0050445 Peli3 protein_coding protein_coding MGP_BALBcJ_T0050446.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1747427 1751070 - Peli3 protein_coding retained_intron MGP_BALBcJ_T0050447.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1747453 1755155 - Peli3 protein_coding processed_transcript MGP_BALBcJ_T0050448.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1747457 1755130 - MGP_BALBcJ_P0050448 Peli3 protein_coding protein_coding MGP_BALBcJ_T0050449.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1747464 1755124 - Peli3 protein_coding processed_transcript MGP_BALBcJ_T0050450.1 MGP_BALBcJ_G0024648.1 mouse_genomes_project 19 1753656 1755103 - Peli3 protein_coding retained_intron MGP_BALBcJ_T0098857.1 MGP_BALBcJ_G0036905.1 mouse_genomes_project 19 25662393 25665155 - 4933413C19Rik sense_intronic sense_intronic MGP_BALBcJ_T0051846.1 MGP_BALBcJ_G0025141.1 mouse_genomes_project 19 41825983 41839242 - MGP_BALBcJ_P0051846 Scd1 protein_coding protein_coding MGP_BALBcJ_T0013356.1 MGP_BALBcJ_G0011453.1 mouse_genomes_project 19 8259727 8260784 - processed_pseudogene processed_pseudogene MGP_BALBcJ_T0007069.1 MGP_BALBcJ_G0005801.1 mouse_genomes_project 19 35327728 35330710 - I830134H01Rik lincRNA lincRNA MGP_BALBcJ_T0007070.1 MGP_BALBcJ_G0005801.1 mouse_genomes_project 19 35327838 35330710 - I830134H01Rik lincRNA lincRNA MGP_BALBcJ_T0052220.1 MGP_BALBcJ_G0025259.1 mouse_genomes_project 19 56955888 57006109 - MGP_BALBcJ_P0052220 Pdzd8 protein_coding protein_coding MGP_BALBcJ_T0013371.1 MGP_BALBcJ_G0011468.1 mouse_genomes_project 19 29622223 29650178 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051651.1 MGP_BALBcJ_G0025077.1 mouse_genomes_project 19 36977460 36991629 - protein_coding processed_transcript MGP_BALBcJ_T0051652.1 MGP_BALBcJ_G0025077.1 mouse_genomes_project 19 36985915 36991624 - MGP_BALBcJ_P0051652 protein_coding protein_coding MGP_BALBcJ_T0100919.1 MGP_BALBcJ_G0038955.1 mouse_genomes_project 19 58459818 58459950 - Snora19 snoRNA snoRNA MGP_BALBcJ_T0051696.1 MGP_BALBcJ_G0025088.1 mouse_genomes_project 19 38298771 38367334 - MGP_BALBcJ_P0051696 Blnk protein_coding protein_coding MGP_BALBcJ_T0051697.1 MGP_BALBcJ_G0025088.1 mouse_genomes_project 19 38298771 38366947 - MGP_BALBcJ_P0051697 Blnk protein_coding protein_coding MGP_BALBcJ_T0051698.1 MGP_BALBcJ_G0025088.1 mouse_genomes_project 19 38333607 38367334 - Blnk protein_coding retained_intron MGP_BALBcJ_T0051465.1 MGP_BALBcJ_G0025006.1 mouse_genomes_project 19 27111669 27113900 + MGP_BALBcJ_P0051465 Trpd52l3 protein_coding protein_coding MGP_BALBcJ_T0007090.1 MGP_BALBcJ_G0005815.1 mouse_genomes_project 19 51050325 51052415 + 4833407H14Rik lincRNA lincRNA MGP_BALBcJ_T0050404.1 MGP_BALBcJ_G0024631.1 mouse_genomes_project 19 1301170 1302964 - MGP_BALBcJ_P0050404 2010003K11Rik protein_coding protein_coding MGP_BALBcJ_T0051427.1 MGP_BALBcJ_G0024996.1 mouse_genomes_project 19 26432812 26436195 - Rln1 protein_coding retained_intron MGP_BALBcJ_T0051428.1 MGP_BALBcJ_G0024996.1 mouse_genomes_project 19 26433349 26436313 - MGP_BALBcJ_P0051428 Rln1 protein_coding protein_coding MGP_BALBcJ_T0051007.1 MGP_BALBcJ_G0024804.1 mouse_genomes_project 19 6892245 6910369 + MGP_BALBcJ_P0051007 Fads3 protein_coding protein_coding MGP_BALBcJ_T0051343.1 MGP_BALBcJ_G0024971.1 mouse_genomes_project 19 21514188 21515043 - MGP_BALBcJ_P0051343 Fam122a protein_coding protein_coding MGP_BALBcJ_T0050315.1 MGP_BALBcJ_G0024611.1 mouse_genomes_project 19 887530 889149 + Cdk2ap2 protein_coding retained_intron MGP_BALBcJ_T0050316.1 MGP_BALBcJ_G0024611.1 mouse_genomes_project 19 887530 888595 + MGP_BALBcJ_P0050316 Cdk2ap2 protein_coding protein_coding MGP_BALBcJ_T0050317.1 MGP_BALBcJ_G0024611.1 mouse_genomes_project 19 887531 889140 + MGP_BALBcJ_P0050317 Cdk2ap2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050318.1 MGP_BALBcJ_G0024611.1 mouse_genomes_project 19 887555 889147 + MGP_BALBcJ_P0050318 Cdk2ap2 protein_coding protein_coding MGP_BALBcJ_T0013372.1 MGP_BALBcJ_G0011469.1 mouse_genomes_project 19 37982456 37983214 + processed_pseudogene processed_pseudogene MGP_BALBcJ_T0051105.1 MGP_BALBcJ_G0024842.1 mouse_genomes_project 19 8127879 8135478 - Ms4a5 protein_coding retained_intron MGP_BALBcJ_T0051106.1 MGP_BALBcJ_G0024842.1 mouse_genomes_project 19 8128512 8139860 - MGP_BALBcJ_P0051106 Ms4a5 protein_coding protein_coding MGP_BALBcJ_T0051107.1 MGP_BALBcJ_G0024842.1 mouse_genomes_project 19 8128512 8139920 - MGP_BALBcJ_P0051107 Ms4a5 protein_coding protein_coding MGP_BALBcJ_T0051108.1 MGP_BALBcJ_G0024842.1 mouse_genomes_project 19 8128797 8135693 - Ms4a5 protein_coding processed_transcript MGP_BALBcJ_T0051109.1 MGP_BALBcJ_G0024842.1 mouse_genomes_project 19 8132772 8139907 - MGP_BALBcJ_P0051109 Ms4a5 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050337.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 939130 945238 + MGP_BALBcJ_P0050337 Coro1b protein_coding protein_coding MGP_BALBcJ_T0050338.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 939130 941017 + MGP_BALBcJ_P0050338 Coro1b protein_coding protein_coding MGP_BALBcJ_T0050339.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 939139 940067 + Coro1b protein_coding retained_intron MGP_BALBcJ_T0050340.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 939143 940147 + Coro1b protein_coding retained_intron MGP_BALBcJ_T0050341.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 939172 942012 + Coro1b protein_coding processed_transcript MGP_BALBcJ_T0050342.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 939175 940766 + Coro1b protein_coding retained_intron MGP_BALBcJ_T0050343.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 941055 944011 + Coro1b protein_coding retained_intron MGP_BALBcJ_T0050344.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 941882 944647 + Coro1b protein_coding retained_intron MGP_BALBcJ_T0050345.1 MGP_BALBcJ_G0024616.1 mouse_genomes_project 19 942092 944864 + Coro1b protein_coding retained_intron MGP_BALBcJ_T0050410.1 MGP_BALBcJ_G0024634.1 mouse_genomes_project 19 1428086 1431151 - MGP_BALBcJ_P0050410 Rce1 protein_coding protein_coding MGP_BALBcJ_T0011464.1 MGP_BALBcJ_G0009589.1 mouse_genomes_project 19 56441217 56441301 - Gm22561 misc_RNA misc_RNA MGP_BALBcJ_T0051267.1 MGP_BALBcJ_G0024939.1 mouse_genomes_project 19 14299101 14317912 - MGP_BALBcJ_P0051267 Gcnt1 protein_coding protein_coding MGP_BALBcJ_T0051268.1 MGP_BALBcJ_G0024939.1 mouse_genomes_project 19 14303087 14335296 - MGP_BALBcJ_P0051268 Gcnt1 protein_coding protein_coding MGP_BALBcJ_T0051269.1 MGP_BALBcJ_G0024939.1 mouse_genomes_project 19 14308305 14335296 - Gcnt1 protein_coding retained_intron MGP_BALBcJ_T0017638.1 MGP_BALBcJ_G0015314.1 mouse_genomes_project 19 2632527 2633515 + Gm20417 processed_transcript processed_transcript MGP_BALBcJ_T0007073.1 MGP_BALBcJ_G0005804.1 mouse_genomes_project 19 41012297 41013848 - Gm20467 lincRNA lincRNA MGP_BALBcJ_T0010272.1 MGP_BALBcJ_G0008397.1 mouse_genomes_project 19 4312386 4312456 + Mir6991 miRNA miRNA MGP_BALBcJ_T0051351.1 MGP_BALBcJ_G0024976.1 mouse_genomes_project 19 22036836 22244112 + MGP_BALBcJ_P0051351 Dock8 protein_coding protein_coding MGP_BALBcJ_T0051543.1 MGP_BALBcJ_G0025039.1 mouse_genomes_project 19 31928958 32008214 - MGP_BALBcJ_P0051543 Slc16a12 protein_coding protein_coding MGP_BALBcJ_T0007079.1 MGP_BALBcJ_G0005809.1 mouse_genomes_project 19 42775653 42784366 - Gm28578 lincRNA lincRNA MGP_BALBcJ_T0007080.1 MGP_BALBcJ_G0005809.1 mouse_genomes_project 19 42775673 42776419 - Gm28578 lincRNA lincRNA MGP_BALBcJ_T0007081.1 MGP_BALBcJ_G0005809.1 mouse_genomes_project 19 42781518 42784352 - Gm28578 lincRNA lincRNA MGP_BALBcJ_T0051769.1 MGP_BALBcJ_G0025117.1 mouse_genomes_project 19 39908250 39979113 + MGP_BALBcJ_P0051769 R3hcc1l protein_coding protein_coding MGP_BALBcJ_T0051770.1 MGP_BALBcJ_G0025117.1 mouse_genomes_project 19 39908289 39977781 + MGP_BALBcJ_P0051770 R3hcc1l protein_coding protein_coding MGP_BALBcJ_T0051771.1 MGP_BALBcJ_G0025117.1 mouse_genomes_project 19 39908313 39961739 + MGP_BALBcJ_P0051771 R3hcc1l protein_coding protein_coding MGP_BALBcJ_T0051772.1 MGP_BALBcJ_G0025117.1 mouse_genomes_project 19 39950083 39962307 + R3hcc1l protein_coding retained_intron MGP_BALBcJ_T0051773.1 MGP_BALBcJ_G0025117.1 mouse_genomes_project 19 39967922 39971517 + R3hcc1l protein_coding retained_intron MGP_BALBcJ_T0007087.1 MGP_BALBcJ_G0005814.1 mouse_genomes_project 19 51030924 51054478 - Mirt1 lincRNA lincRNA MGP_BALBcJ_T0007088.1 MGP_BALBcJ_G0005814.1 mouse_genomes_project 19 51033669 51036970 - Mirt1 lincRNA lincRNA MGP_BALBcJ_T0007089.1 MGP_BALBcJ_G0005814.1 mouse_genomes_project 19 51041321 51043775 - Mirt1 lincRNA lincRNA MGP_BALBcJ_T0100916.1 MGP_BALBcJ_G0038952.1 mouse_genomes_project 19 43834712 43834821 + Gm24610 snoRNA snoRNA MGP_BALBcJ_T0007057.1 MGP_BALBcJ_G0005793.1 mouse_genomes_project 19 25762054 25804738 + D930032P07Rik lincRNA lincRNA MGP_BALBcJ_T0007058.1 MGP_BALBcJ_G0005793.1 mouse_genomes_project 19 25762058 25804463 + D930032P07Rik lincRNA lincRNA MGP_BALBcJ_T0051505.1 MGP_BALBcJ_G0025019.1 mouse_genomes_project 19 29906023 29977207 + MGP_BALBcJ_P0051505 Pten protein_coding protein_coding MGP_BALBcJ_T0051506.1 MGP_BALBcJ_G0025019.1 mouse_genomes_project 19 29906121 29952641 + Pten protein_coding retained_intron MGP_BALBcJ_T0051507.1 MGP_BALBcJ_G0025019.1 mouse_genomes_project 19 29961009 29967780 + Pten protein_coding retained_intron MGP_BALBcJ_T0050496.1 MGP_BALBcJ_G0024673.1 mouse_genomes_project 19 2285192 2285801 - MGP_BALBcJ_P0050496 Ccdc85b protein_coding protein_coding MGP_BALBcJ_T0050999.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6851403 6886293 + MGP_BALBcJ_P0050999 Rab3il1 protein_coding protein_coding MGP_BALBcJ_T0051000.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6865531 6878283 + MGP_BALBcJ_P0051000 Rab3il1 protein_coding protein_coding MGP_BALBcJ_T0051001.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6865559 6878184 + MGP_BALBcJ_P0051001 Rab3il1 protein_coding protein_coding MGP_BALBcJ_T0051002.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6868708 6886163 + MGP_BALBcJ_P0051002 Rab3il1 protein_coding protein_coding MGP_BALBcJ_T0051003.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6868709 6886162 + MGP_BALBcJ_P0051003 Rab3il1 protein_coding protein_coding MGP_BALBcJ_T0051004.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6868709 6889087 + MGP_BALBcJ_P0051004 Rab3il1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051005.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6868780 6879015 + MGP_BALBcJ_P0051005 Rab3il1 protein_coding protein_coding MGP_BALBcJ_T0051006.1 MGP_BALBcJ_G0024803.1 mouse_genomes_project 19 6882376 6884517 + Rab3il1 protein_coding retained_intron MGP_BALBcJ_T0100910.1 MGP_BALBcJ_G0038946.1 mouse_genomes_project 19 24777215 24777347 - Gm24782 snoRNA snoRNA MGP_BALBcJ_T0051286.1 MGP_BALBcJ_G0024946.1 mouse_genomes_project 19 15732308 15875881 + MGP_BALBcJ_P0051286 Trpm6 protein_coding protein_coding MGP_BALBcJ_T0051287.1 MGP_BALBcJ_G0024946.1 mouse_genomes_project 19 15732356 15875508 + MGP_BALBcJ_P0051287 Trpm6 protein_coding unknown_likely_coding MGP_BALBcJ_T0051617.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596462 35646590 + MGP_BALBcJ_P0051617 Lgi1 protein_coding protein_coding MGP_BALBcJ_T0051618.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596493 35643074 + MGP_BALBcJ_P0051618 Lgi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051619.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596503 35640935 + MGP_BALBcJ_P0051619 Lgi1 protein_coding protein_coding MGP_BALBcJ_T0051620.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596572 35640934 + MGP_BALBcJ_P0051620 Lgi1 protein_coding protein_coding MGP_BALBcJ_T0051621.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596586 35630655 + MGP_BALBcJ_P0051621 Lgi1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051622.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596597 35639776 + MGP_BALBcJ_P0051622 Lgi1 protein_coding protein_coding MGP_BALBcJ_T0051623.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596684 35597817 + Lgi1 protein_coding retained_intron MGP_BALBcJ_T0051624.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35596737 35600950 + Lgi1 protein_coding retained_intron MGP_BALBcJ_T0051625.1 MGP_BALBcJ_G0025065.1 mouse_genomes_project 19 35597312 35633951 + Lgi1 protein_coding retained_intron MGP_BALBcJ_T0052008.1 MGP_BALBcJ_G0025194.1 mouse_genomes_project 19 44575678 44624650 + MGP_BALBcJ_P0052008 Pdcd11 protein_coding protein_coding MGP_BALBcJ_T0017669.1 MGP_BALBcJ_G0015321.1 mouse_genomes_project 19 8329477 8353437 - processed_transcript antisense MGP_BALBcJ_T0017670.1 MGP_BALBcJ_G0015321.1 mouse_genomes_project 19 8339150 8353438 - processed_transcript antisense MGP_BALBcJ_T0099641.1 MGP_BALBcJ_G0037677.1 mouse_genomes_project 19 23329281 23329406 - Gm25176 snRNA snRNA MGP_BALBcJ_T0098564.1 MGP_BALBcJ_G0036618.1 mouse_genomes_project 19 41349484 41349601 + n-R5s21 rRNA rRNA MGP_BALBcJ_T0010295.1 MGP_BALBcJ_G0008420.1 mouse_genomes_project 19 39668617 39668716 + Gm26339 miRNA miRNA MGP_BALBcJ_T0050408.1 MGP_BALBcJ_G0024633.1 mouse_genomes_project 19 1417321 1421204 - MGP_BALBcJ_P0050408 Lrfn4 protein_coding protein_coding MGP_BALBcJ_T0050409.1 MGP_BALBcJ_G0024633.1 mouse_genomes_project 19 1417328 1421039 - MGP_BALBcJ_P0050409 Lrfn4 protein_coding protein_coding MGP_BALBcJ_T0050225.1 MGP_BALBcJ_G0024591.1 mouse_genomes_project 19 208613 330383 - MGP_BALBcJ_P0050225 Ppp6r3 protein_coding unknown_likely_coding MGP_BALBcJ_T0050226.1 MGP_BALBcJ_G0024591.1 mouse_genomes_project 19 208617 330400 - MGP_BALBcJ_P0050226 Ppp6r3 protein_coding protein_coding MGP_BALBcJ_T0050227.1 MGP_BALBcJ_G0024591.1 mouse_genomes_project 19 208617 330400 - MGP_BALBcJ_P0050227 Ppp6r3 protein_coding protein_coding MGP_BALBcJ_T0050228.1 MGP_BALBcJ_G0024591.1 mouse_genomes_project 19 208617 330400 - MGP_BALBcJ_P0050228 Ppp6r3 protein_coding protein_coding MGP_BALBcJ_T0051841.1 MGP_BALBcJ_G0025138.1 mouse_genomes_project 19 41619720 41661832 + MGP_BALBcJ_P0051841 Scd3 protein_coding protein_coding MGP_BALBcJ_T0050815.1 MGP_BALBcJ_G0024748.1 mouse_genomes_project 19 3872980 3894985 - MGP_BALBcJ_P0050815 Fermt3 protein_coding protein_coding MGP_BALBcJ_T0052204.1 MGP_BALBcJ_G0025248.1 mouse_genomes_project 19 56160552 56201081 + MGP_BALBcJ_P0052204 Ccdc172 protein_coding protein_coding MGP_BALBcJ_T0052216.1 MGP_BALBcJ_G0025256.1 mouse_genomes_project 19 56830250 56834120 - MGP_BALBcJ_P0052216 Vax1 protein_coding protein_coding MGP_BALBcJ_T0052217.1 MGP_BALBcJ_G0025256.1 mouse_genomes_project 19 56830661 56831044 - Vax1 protein_coding processed_transcript MGP_BALBcJ_T0010299.1 MGP_BALBcJ_G0008424.1 mouse_genomes_project 19 42252630 42252754 + Mir6405 miRNA miRNA MGP_BALBcJ_T0010264.1 MGP_BALBcJ_G0008389.1 mouse_genomes_project 19 2512732 2512805 - Mir6987 miRNA miRNA MGP_BALBcJ_T0052092.1 MGP_BALBcJ_G0025224.1 mouse_genomes_project 19 51650884 51654685 + MGP_BALBcJ_P0052092 Adra2a protein_coding protein_coding MGP_BALBcJ_T0050525.1 MGP_BALBcJ_G0024678.1 mouse_genomes_project 19 2318848 2322393 + MGP_BALBcJ_P0050525 Cfl1 protein_coding protein_coding MGP_BALBcJ_T0052055.1 MGP_BALBcJ_G0025210.1 mouse_genomes_project 19 47576203 47576815 - MGP_BALBcJ_P0052055 Rpl13a-ps1 protein_coding protein_coding MGP_BALBcJ_T0051611.1 MGP_BALBcJ_G0025062.1 mouse_genomes_project 19 35443477 35452081 - MGP_BALBcJ_P0051611 Rbp4 protein_coding protein_coding MGP_BALBcJ_T0051612.1 MGP_BALBcJ_G0025062.1 mouse_genomes_project 19 35443477 35451570 - MGP_BALBcJ_P0051612 Rbp4 protein_coding protein_coding MGP_BALBcJ_T0051809.1 MGP_BALBcJ_G0025129.1 mouse_genomes_project 19 41193993 41258179 + MGP_BALBcJ_P0051809 Abcc2 protein_coding protein_coding MGP_BALBcJ_T0051810.1 MGP_BALBcJ_G0025129.1 mouse_genomes_project 19 41194127 41196828 + Abcc2 protein_coding retained_intron MGP_BALBcJ_T0051811.1 MGP_BALBcJ_G0025129.1 mouse_genomes_project 19 41194205 41243539 + MGP_BALBcJ_P0051811 Abcc2 protein_coding unknown_likely_coding MGP_BALBcJ_T0051812.1 MGP_BALBcJ_G0025129.1 mouse_genomes_project 19 41213741 41216533 + Abcc2 protein_coding retained_intron MGP_BALBcJ_T0051813.1 MGP_BALBcJ_G0025129.1 mouse_genomes_project 19 41227557 41230437 + Abcc2 protein_coding retained_intron MGP_BALBcJ_T0051814.1 MGP_BALBcJ_G0025129.1 mouse_genomes_project 19 41256241 41258167 + MGP_BALBcJ_P0051814 Abcc2 protein_coding protein_coding MGP_BALBcJ_T0050605.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2916041 2921016 - MGP_BALBcJ_P0050605 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050606.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2916041 2921055 - MGP_BALBcJ_P0050606 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050607.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2916042 2921055 - MGP_BALBcJ_P0050607 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050608.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2916121 2921016 - MGP_BALBcJ_P0050608 Tm7sf2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050609.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2916198 2921021 - MGP_BALBcJ_P0050609 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050610.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2917042 2920998 - MGP_BALBcJ_P0050610 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050611.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2917313 2921021 - MGP_BALBcJ_P0050611 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050612.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2918737 2920989 - Tm7sf2 protein_coding retained_intron MGP_BALBcJ_T0050613.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2919339 2921063 - Tm7sf2 protein_coding retained_intron MGP_BALBcJ_T0050614.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2919356 2921080 - Tm7sf2 protein_coding retained_intron MGP_BALBcJ_T0050615.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2919395 2920305 - Tm7sf2 protein_coding retained_intron MGP_BALBcJ_T0050616.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2919397 2921068 - MGP_BALBcJ_P0050616 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050617.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2919789 2920774 - Tm7sf2 protein_coding retained_intron MGP_BALBcJ_T0050618.1 MGP_BALBcJ_G0024708.1 mouse_genomes_project 19 2920375 2921586 - MGP_BALBcJ_P0050618 Tm7sf2 protein_coding protein_coding MGP_BALBcJ_T0050416.1 MGP_BALBcJ_G0024638.1 mouse_genomes_project 19 1565625 1571731 + Rbm4b protein_coding retained_intron MGP_BALBcJ_T0050417.1 MGP_BALBcJ_G0024638.1 mouse_genomes_project 19 1565647 1570197 + Rbm4b protein_coding retained_intron MGP_BALBcJ_T0050418.1 MGP_BALBcJ_G0024638.1 mouse_genomes_project 19 1565653 1574797 + MGP_BALBcJ_P0050418 Rbm4b protein_coding protein_coding MGP_BALBcJ_T0050419.1 MGP_BALBcJ_G0024638.1 mouse_genomes_project 19 1565663 1572985 + MGP_BALBcJ_P0050419 Rbm4b protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050420.1 MGP_BALBcJ_G0024638.1 mouse_genomes_project 19 1570250 1575922 + Rbm4b protein_coding retained_intron MGP_BALBcJ_T0050421.1 MGP_BALBcJ_G0024638.1 mouse_genomes_project 19 1573319 1574498 + Rbm4b protein_coding processed_transcript MGP_BALBcJ_T0050553.1 MGP_BALBcJ_G0024688.1 mouse_genomes_project 19 2522651 2536386 + MGP_BALBcJ_P0050553 Map3k11 protein_coding protein_coding MGP_BALBcJ_T0052139.1 MGP_BALBcJ_G0025234.1 mouse_genomes_project 19 54027603 54066860 + MGP_BALBcJ_P0052139 Casp7 protein_coding protein_coding MGP_BALBcJ_T0051094.1 MGP_BALBcJ_G0024838.1 mouse_genomes_project 19 8005279 8030505 - MGP_BALBcJ_P0051094 1700025F22Rik protein_coding protein_coding MGP_BALBcJ_T0051095.1 MGP_BALBcJ_G0024838.1 mouse_genomes_project 19 8005279 8024056 - MGP_BALBcJ_P0051095 1700025F22Rik protein_coding protein_coding MGP_BALBcJ_T0051096.1 MGP_BALBcJ_G0024838.1 mouse_genomes_project 19 8005279 8030491 - MGP_BALBcJ_P0051096 1700025F22Rik protein_coding protein_coding MGP_BALBcJ_T0051097.1 MGP_BALBcJ_G0024838.1 mouse_genomes_project 19 8005279 8030491 - MGP_BALBcJ_P0051097 1700025F22Rik protein_coding protein_coding MGP_BALBcJ_T0051080.1 MGP_BALBcJ_G0024832.1 mouse_genomes_project 19 7803834 7809686 - Ccdc86 protein_coding processed_transcript MGP_BALBcJ_T0051081.1 MGP_BALBcJ_G0024832.1 mouse_genomes_project 19 7803834 7811560 - MGP_BALBcJ_P0051081 Ccdc86 protein_coding protein_coding MGP_BALBcJ_T0051082.1 MGP_BALBcJ_G0024832.1 mouse_genomes_project 19 7807860 7811545 - Ccdc86 protein_coding retained_intron MGP_BALBcJ_T0051547.1 MGP_BALBcJ_G0025042.1 mouse_genomes_project 19 33220955 33326785 - MGP_BALBcJ_P0051547 Htr7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051548.1 MGP_BALBcJ_G0025042.1 mouse_genomes_project 19 33220955 33326785 - MGP_BALBcJ_P0051548 Htr7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051549.1 MGP_BALBcJ_G0025042.1 mouse_genomes_project 19 33220955 33326765 - MGP_BALBcJ_P0051549 Htr7 protein_coding protein_coding MGP_BALBcJ_T0051550.1 MGP_BALBcJ_G0025042.1 mouse_genomes_project 19 33220966 33326793 - MGP_BALBcJ_P0051550 Htr7 protein_coding protein_coding MGP_BALBcJ_T0051551.1 MGP_BALBcJ_G0025042.1 mouse_genomes_project 19 33222041 33326932 - MGP_BALBcJ_P0051551 Htr7 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051552.1 MGP_BALBcJ_G0025042.1 mouse_genomes_project 19 33222536 33326798 - MGP_BALBcJ_P0051552 Htr7 protein_coding protein_coding MGP_BALBcJ_T0051568.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34114261 34173349 + MGP_BALBcJ_P0051568 Tnks2 protein_coding protein_coding MGP_BALBcJ_T0051569.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34114433 34135788 + Tnks2 protein_coding processed_transcript MGP_BALBcJ_T0051570.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34129232 34134863 + Tnks2 protein_coding retained_intron MGP_BALBcJ_T0051571.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34137611 34142434 + Tnks2 protein_coding retained_intron MGP_BALBcJ_T0051572.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34137994 34152516 + MGP_BALBcJ_P0051572 Tnks2 protein_coding protein_coding MGP_BALBcJ_T0051573.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34139207 34146419 + MGP_BALBcJ_P0051573 Tnks2 protein_coding protein_coding MGP_BALBcJ_T0051574.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34151803 34164089 + MGP_BALBcJ_P0051574 Tnks2 protein_coding protein_coding MGP_BALBcJ_T0051575.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34158519 34163086 + Tnks2 protein_coding retained_intron MGP_BALBcJ_T0051576.1 MGP_BALBcJ_G0025048.1 mouse_genomes_project 19 34160577 34167304 + Tnks2 protein_coding retained_intron MGP_BALBcJ_T0010311.1 MGP_BALBcJ_G0008436.1 mouse_genomes_project 19 58459817 58459886 - Mir3084-2 miRNA miRNA MGP_BALBcJ_T0050825.1 MGP_BALBcJ_G0024754.1 mouse_genomes_project 19 4112523 4128256 - MGP_BALBcJ_P0050825 Naa40 protein_coding protein_coding MGP_BALBcJ_T0051183.1 MGP_BALBcJ_G0024881.1 mouse_genomes_project 19 9302566 9339675 - MGP_BALBcJ_P0051183 Dtx4 protein_coding protein_coding MGP_BALBcJ_T0010278.1 MGP_BALBcJ_G0008403.1 mouse_genomes_project 19 8810113 8810186 + Mir6994 miRNA miRNA MGP_BALBcJ_T0052208.1 MGP_BALBcJ_G0025252.1 mouse_genomes_project 19 56440412 56449102 - MGP_BALBcJ_P0052208 1700019N19Rik protein_coding protein_coding MGP_BALBcJ_T0052209.1 MGP_BALBcJ_G0025252.1 mouse_genomes_project 19 56440605 56447914 - MGP_BALBcJ_P0052209 1700019N19Rik protein_coding protein_coding MGP_BALBcJ_T0051069.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7756982 7767284 + MGP_BALBcJ_P0051069 Prpf19 protein_coding protein_coding MGP_BALBcJ_T0051070.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7757028 7759663 + Prpf19 protein_coding retained_intron MGP_BALBcJ_T0051071.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7757033 7760012 + Prpf19 protein_coding retained_intron MGP_BALBcJ_T0051072.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7757124 7761119 + Prpf19 protein_coding retained_intron MGP_BALBcJ_T0051073.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7757165 7771790 + MGP_BALBcJ_P0051073 Prpf19 protein_coding protein_coding MGP_BALBcJ_T0051074.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7760396 7767258 + Prpf19 protein_coding processed_transcript MGP_BALBcJ_T0051075.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7761120 7764512 + Prpf19 protein_coding retained_intron MGP_BALBcJ_T0051076.1 MGP_BALBcJ_G0024829.1 mouse_genomes_project 19 7762033 7762745 + Prpf19 protein_coding retained_intron MGP_BALBcJ_T0098351.1 MGP_BALBcJ_G0036405.1 mouse_genomes_project 19 9936095 9936612 - pseudogene pseudogene MGP_BALBcJ_T0007074.1 MGP_BALBcJ_G0005805.1 mouse_genomes_project 19 42135501 42138411 - Gm26644 lincRNA lincRNA MGP_BALBcJ_T0051722.1 MGP_BALBcJ_G0025102.1 mouse_genomes_project 19 39302923 39313289 - MGP_BALBcJ_P0051722 Exosc1 protein_coding protein_coding MGP_BALBcJ_T0051723.1 MGP_BALBcJ_G0025102.1 mouse_genomes_project 19 39302923 39313289 - MGP_BALBcJ_P0051723 Exosc1 protein_coding protein_coding MGP_BALBcJ_T0050479.1 MGP_BALBcJ_G0024664.1 mouse_genomes_project 19 2164846 2173274 + MGP_BALBcJ_P0050479 Catsper1 protein_coding protein_coding MGP_BALBcJ_T0051173.1 MGP_BALBcJ_G0024871.1 mouse_genomes_project 19 9024537 9025585 - MGP_BALBcJ_P0051173 Olfr76 protein_coding protein_coding MGP_BALBcJ_T0051844.1 MGP_BALBcJ_G0025140.1 mouse_genomes_project 19 41762613 41764245 + Scd4 protein_coding retained_intron MGP_BALBcJ_T0051845.1 MGP_BALBcJ_G0025140.1 mouse_genomes_project 19 41762613 41776491 + MGP_BALBcJ_P0051845 Scd4 protein_coding protein_coding MGP_BALBcJ_T0050528.1 MGP_BALBcJ_G0024681.1 mouse_genomes_project 19 2380966 2392405 - MGP_BALBcJ_P0050528 Ovol1 protein_coding protein_coding MGP_BALBcJ_T0010297.1 MGP_BALBcJ_G0008422.1 mouse_genomes_project 19 41025683 41025814 + Gm22646 miRNA miRNA MGP_BALBcJ_T0007066.1 MGP_BALBcJ_G0005798.1 mouse_genomes_project 19 32323130 32327172 - Gm5248 lincRNA lincRNA MGP_BALBcJ_T0051838.1 MGP_BALBcJ_G0025137.1 mouse_genomes_project 19 41567464 41608685 - MGP_BALBcJ_P0051838 Pkd2l1 protein_coding protein_coding MGP_BALBcJ_T0051839.1 MGP_BALBcJ_G0025137.1 mouse_genomes_project 19 41567465 41608685 - Pkd2l1 protein_coding retained_intron MGP_BALBcJ_T0051840.1 MGP_BALBcJ_G0025137.1 mouse_genomes_project 19 41568334 41611458 - MGP_BALBcJ_P0051840 Pkd2l1 protein_coding unknown_likely_coding MGP_BALBcJ_T0010271.1 MGP_BALBcJ_G0008396.1 mouse_genomes_project 19 3784996 3785087 - Mir6990 miRNA miRNA MGP_BALBcJ_T0003855.1 MGP_BALBcJ_G0003450.1 mouse_genomes_project 19 42218038 42228769 - Gm20395 antisense antisense MGP_BALBcJ_T0051815.1 MGP_BALBcJ_G0025130.1 mouse_genomes_project 19 41264029 41357365 - MGP_BALBcJ_P0051815 Dnmbp protein_coding unknown_likely_coding MGP_BALBcJ_T0051816.1 MGP_BALBcJ_G0025130.1 mouse_genomes_project 19 41265183 41329579 - MGP_BALBcJ_P0051816 Dnmbp protein_coding protein_coding MGP_BALBcJ_T0099652.1 MGP_BALBcJ_G0037688.1 mouse_genomes_project 19 48786429 48786536 - Gm25644 snRNA snRNA MGP_BALBcJ_T0051196.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531568 9556042 + MGP_BALBcJ_P0051196 Keg1 protein_coding protein_coding MGP_BALBcJ_T0051197.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531569 9552179 + Keg1 protein_coding processed_transcript MGP_BALBcJ_T0051198.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531575 9554696 + Keg1 protein_coding retained_intron MGP_BALBcJ_T0051199.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531575 9555147 + MGP_BALBcJ_P0051199 Keg1 protein_coding protein_coding MGP_BALBcJ_T0051200.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531586 9550963 + Keg1 protein_coding retained_intron MGP_BALBcJ_T0051201.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531596 9550885 + Keg1 protein_coding retained_intron MGP_BALBcJ_T0051202.1 MGP_BALBcJ_G0024887.1 mouse_genomes_project 19 9531596 9555257 + MGP_BALBcJ_P0051202 Keg1 protein_coding protein_coding MGP_BALBcJ_T0050657.1 MGP_BALBcJ_G0024718.1 mouse_genomes_project 19 3000915 3032829 + Batf2 protein_coding processed_transcript MGP_BALBcJ_T0050658.1 MGP_BALBcJ_G0024718.1 mouse_genomes_project 19 3024794 3032832 + MGP_BALBcJ_P0050658 Batf2 protein_coding protein_coding MGP_BALBcJ_T0050659.1 MGP_BALBcJ_G0024718.1 mouse_genomes_project 19 3024809 3032124 + Batf2 protein_coding retained_intron MGP_BALBcJ_T0050660.1 MGP_BALBcJ_G0024718.1 mouse_genomes_project 19 3024809 3031723 + Batf2 protein_coding retained_intron MGP_BALBcJ_T0050661.1 MGP_BALBcJ_G0024718.1 mouse_genomes_project 19 3024815 3032114 + Batf2 protein_coding processed_transcript MGP_BALBcJ_T0050662.1 MGP_BALBcJ_G0024718.1 mouse_genomes_project 19 3024844 3031723 + Batf2 protein_coding retained_intron MGP_BALBcJ_T0050693.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204618 3219096 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050694.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204638 3206140 + MGP_BALBcJ_P0050694 Map4k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050695.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204643 3219099 + MGP_BALBcJ_P0050695 Map4k2 protein_coding protein_coding MGP_BALBcJ_T0050696.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204674 3205480 + Map4k2 protein_coding processed_transcript MGP_BALBcJ_T0050697.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204691 3218785 + MGP_BALBcJ_P0050697 Map4k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050698.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204699 3206358 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050699.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204707 3209226 + MGP_BALBcJ_P0050699 Map4k2 protein_coding protein_coding MGP_BALBcJ_T0050700.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204733 3217011 + MGP_BALBcJ_P0050700 Map4k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050701.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204753 3207007 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050702.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204901 3207342 + Map4k2 protein_coding processed_transcript MGP_BALBcJ_T0050703.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204932 3207005 + Map4k2 protein_coding processed_transcript MGP_BALBcJ_T0050704.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3204954 3207005 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050705.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3205262 3215371 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050706.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3206020 3206329 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050707.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3206999 3208131 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050708.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3208833 3209777 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050709.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3210032 3217324 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050710.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3210152 3215143 + Map4k2 protein_coding processed_transcript MGP_BALBcJ_T0050711.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3210175 3217322 + MGP_BALBcJ_P0050711 Map4k2 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050712.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3214392 3215064 + Map4k2 protein_coding retained_intron MGP_BALBcJ_T0050713.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3216103 3218926 + Map4k2 protein_coding processed_transcript MGP_BALBcJ_T0050714.1 MGP_BALBcJ_G0024726.1 mouse_genomes_project 19 3216258 3217117 + Map4k2 protein_coding processed_transcript MGP_BALBcJ_T0050982.1 MGP_BALBcJ_G0024794.1 mouse_genomes_project 19 6016123 6028847 + MGP_BALBcJ_P0050982 Tut1 protein_coding protein_coding MGP_BALBcJ_T0051156.1 MGP_BALBcJ_G0024857.1 mouse_genomes_project 19 8573981 8591352 + MGP_BALBcJ_P0051156 Oosp3 protein_coding protein_coding MGP_BALBcJ_T0051157.1 MGP_BALBcJ_G0024857.1 mouse_genomes_project 19 8574004 8591368 + MGP_BALBcJ_P0051157 Oosp3 protein_coding protein_coding MGP_BALBcJ_T0007051.1 MGP_BALBcJ_G0005789.1 mouse_genomes_project 19 20141518 20142336 + 2410080I02Rik lincRNA lincRNA MGP_BALBcJ_T0051222.1 MGP_BALBcJ_G0024905.1 mouse_genomes_project 19 10041164 10042088 + MGP_BALBcJ_P0051222 Olfr1462 protein_coding protein_coding MGP_BALBcJ_T0051868.1 MGP_BALBcJ_G0025149.1 mouse_genomes_project 19 42436697 42451341 + MGP_BALBcJ_P0051868 Sema4g protein_coding protein_coding MGP_BALBcJ_T0051869.1 MGP_BALBcJ_G0025149.1 mouse_genomes_project 19 42436887 42451341 + MGP_BALBcJ_P0051869 Sema4g protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051870.1 MGP_BALBcJ_G0025149.1 mouse_genomes_project 19 42436939 42451346 + MGP_BALBcJ_P0051870 Sema4g protein_coding unknown_likely_coding MGP_BALBcJ_T0051871.1 MGP_BALBcJ_G0025149.1 mouse_genomes_project 19 42439738 42451338 + MGP_BALBcJ_P0051871 Sema4g protein_coding protein_coding MGP_BALBcJ_T0050278.1 MGP_BALBcJ_G0024597.1 mouse_genomes_project 19 694567 698415 - MGP_BALBcJ_P0050278 Ndufs8 protein_coding protein_coding MGP_BALBcJ_T0050296.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 797557 798073 - Ndufv1 protein_coding retained_intron MGP_BALBcJ_T0050297.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 797558 802677 - MGP_BALBcJ_P0050297 Ndufv1 protein_coding protein_coding MGP_BALBcJ_T0050298.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 797616 802728 - MGP_BALBcJ_P0050298 Ndufv1 protein_coding protein_coding MGP_BALBcJ_T0050299.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 798349 799902 - Ndufv1 protein_coding retained_intron MGP_BALBcJ_T0050300.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 798419 799195 - Ndufv1 protein_coding retained_intron MGP_BALBcJ_T0050301.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 798807 802759 - Ndufv1 protein_coding retained_intron MGP_BALBcJ_T0050302.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 799421 802763 - MGP_BALBcJ_P0050302 Ndufv1 protein_coding protein_coding MGP_BALBcJ_T0050303.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 799472 802720 - MGP_BALBcJ_P0050303 Ndufv1 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0050304.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 799516 802814 - MGP_BALBcJ_P0050304 Ndufv1 protein_coding protein_coding MGP_BALBcJ_T0050305.1 MGP_BALBcJ_G0024606.1 mouse_genomes_project 19 800055 802716 - Ndufv1 protein_coding retained_intron MGP_BALBcJ_T0050484.1 MGP_BALBcJ_G0024668.1 mouse_genomes_project 19 2206860 2217811 - MGP_BALBcJ_P0050484 Sart1 protein_coding protein_coding MGP_BALBcJ_T0051655.1 MGP_BALBcJ_G0025080.1 mouse_genomes_project 19 37502764 37537651 - MGP_BALBcJ_P0051655 Cyp2c70 protein_coding protein_coding MGP_BALBcJ_T0051656.1 MGP_BALBcJ_G0025080.1 mouse_genomes_project 19 37514526 37537651 - MGP_BALBcJ_P0051656 Cyp2c70 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051657.1 MGP_BALBcJ_G0025080.1 mouse_genomes_project 19 37515601 37537651 - MGP_BALBcJ_P0051657 Cyp2c70 protein_coding nonsense_mediated_decay MGP_BALBcJ_T0051658.1 MGP_BALBcJ_G0025080.1 mouse_genomes_project 19 37530585 37537698 - Cyp2c70 protein_coding retained_intron MGP_BALBcJ_T0051164.1 MGP_BALBcJ_G0024862.1 mouse_genomes_project 19 8709078 8739205 - MGP_BALBcJ_P0051164 protein_coding protein_coding MGP_BALBcJ_T0051765.1 MGP_BALBcJ_G0025114.1 mouse_genomes_project 19 39591781 39596056 - MGP_BALBcJ_P0051765 Sfrp5 protein_coding protein_coding MGP_BALBcJ_T0052218.1 MGP_BALBcJ_G0025257.1 mouse_genomes_project 19 56882604 56897254 + MGP_BALBcJ_P0052218 Kcnk18 protein_coding protein_coding MGP_BALBcJ_T0011455.1 MGP_BALBcJ_G0009580.1 mouse_genomes_project 19 14037270 14037531 - Gm27796 misc_RNA misc_RNA MGP_BALBcJ_T0051168.1 MGP_BALBcJ_G0024866.1 mouse_genomes_project 19 8853895 8881870 + MGP_BALBcJ_P0051168 Osbp protein_coding protein_coding MGP_BALBcJ_T0051216.1 MGP_BALBcJ_G0024899.1 mouse_genomes_project 19 9875345 9876269 - MGP_BALBcJ_P0051216 Olfr1453 protein_coding protein_coding MGP_BALBcJ_T0051117.1 MGP_BALBcJ_G0024846.1 mouse_genomes_project 19 8260549 8281321 + MGP_BALBcJ_P0051117 Ms4a4c protein_coding protein_coding MGP_BALBcJ_T0051118.1 MGP_BALBcJ_G0024846.1 mouse_genomes_project 19 8263440 8286768 + MGP_BALBcJ_P0051118 Ms4a4c protein_coding protein_coding MGP_BALBcJ_T0051119.1 MGP_BALBcJ_G0024846.1 mouse_genomes_project 19 8272047 8285990 + MGP_BALBcJ_P0051119 Ms4a4c protein_coding protein_coding